##maf version=1 scoring=roast.v3.3 a score=144087.000000 s hg38.chr10_KI270825v1_alt 0 116 + 188315 tttatgtattcaagatatgagtactttgtcagtaatttccaattattttcttctagtctgtagctcgccttttcatctttgtaaagagc--aaaagtcttttacagagcaaagccttt s panTro4.chr10 76370585 116 + 133524379 tttatgtattcaagatatgagtactttgtcagtaatttccaattattttcttctagtctgtagctcgccttttcatctttgtaaagagc--aaaagtcttttacagagcaaagccttt i panTro4.chr10 N 0 C 0 s rheMac3.chr9 73774552 118 - 130959383 tttatgtattcgagagatgagtcctttgtcagtaatttctacttagtttcttctagtctgtagctcgccttttcatctttgtaaagagcaaaaaaggcttttgcagagcaaggccttt i rheMac3.chr9 N 0 C 0 s macFas5.chr9 75336803 118 - 133195287 tttatgtattcgagagatgagtcctttgtcagtaatttctacttagtttcttctagtctgtagctcgccttttcatctttgtaaagagcaaaaaaggcttttacagagcaaggccttt i macFas5.chr9 N 0 C 0 s papAnu2.chr9 73200884 118 - 125196307 tttatgtattcaaGAGATGAGTCCTTTGTCAGTAATTTCTACTTAGTTTCTTCTAGTCTGTAGCTCGCCTTTTCATCTTTGTAAAGAGCAAAAAAGGCTTTTACAGAGCAaagccttt i papAnu2.chr9 N 0 C 0 s chlSab2.chr9 72032876 114 - 125710982 tttatgtattcgagagatgagtcctttgtcagtaatttccacttagtttcttctagtctgtagctcgccttttcatctttgtaaagagcaaaaaaggcttttacagagc----ctttt i chlSab2.chr9 N 0 C 0 a score=1911.000000 s hg38.chr10_KI270825v1_alt 116 1 + 188315 t s panTro4.chr10 76370701 1 + 133524379 t i panTro4.chr10 C 0 C 0 s rheMac3.chr9 73774670 1 - 130959383 t i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75336921 1 - 133195287 t i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73201002 1 - 125196307 t i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72032990 1 - 125710982 t i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75495355 1 - 121768101 T i calJac3.chr12 N 0 C 0 a score=463486.000000 s hg38.chr10_KI270825v1_alt 117 230 + 188315 aattttcttttaaattgagacggagtctcgc--tctcacccaggctggagtgcagtg-gcgcaatctccactcactgcaacctctgcctc------ccagattgaagcgattcccctgcctcagcct-ccgagtagatgggattacaggcatgcggcaccacacccagctaacttttgtatttttaatagagacaaggtttcatcatgttggccaggctggtcttgaactcctgacctca s panTro4.chr10 76370702 230 + 133524379 aattttcttttaaattgagacggagtctcgc--tctcacccaggctggagtgcagtg-gcgcaatctccactcactgcaacctctgcctc------ccagattgaagcgattcccctgcctcagcct-ctgagtagatgggattacaggcatgcagcaccacacccagctaatttttgtatttttaatagagacaaggtttcatcatgttggccaggctggtcttgaactcctgacctca i panTro4.chr10 C 0 C 0 s nomLeu3.chr18 34978214 233 + 104879549 AAtttttttttaaattgagacagagtctcgctgtctcacccaggctggagtgcagtgttttttatctccactcactgcaacctctgcctc------ccaggttgaagcgattcccctgcctcagcct-cccactagatgggattacaggcatgcgccactacacccagctaatttttgtatttttaatagagacaagttttcatcatgttggccaggctggtcttgaactcctgacctca i nomLeu3.chr18 N 0 C 0 s rheMac3.chr9 73774671 214 - 130959383 aattttcttttaaattgagacggagtcttgctctctcactcaggctagagtgcagtg-gcgccatctccactcactgcggtctctgcct------------------------ccctgcctcagccg-ccgagtagatgggattacaggcatgcgccaccacacccagctaatttttgtatttttaatagagacaaggtttcatcatgttggccaggctggtcttgaactcctgacctca i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75336922 214 - 133195287 aattttcttttaaattgagacggagtcttgctctctcactcaggctagagtgcagtg-gcgccatctccactcactgcagtctctgcct------------------------ccctgcctcagcct-ccgagtagatgggattacaggcatgcgccaccacactcagctaatttttgtatttttaatagagacaaggtttcatcatgttggccaggctggtcttgaactcctgacctca i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73201003 214 - 125196307 aattttcttttaaattgagacggagtcttgctctctcactcaggctggagtgcagtg-gcgccatctccactcactgcagtctctgcct------------------------ccctgcctcagcct-ccgagtagatgggattacaggcatgcgccaccacacccagctaatttttgtatttttaatagagacaaggtttcatcatgttggccaggctggtcttgaactcctgacctca i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72032991 214 - 125710982 aattttcttttaaattgagaccgagtcttgctctctcactcaggctggagtgcagtg-gcgccatctccactcactgcagtctctgcct------------------------ccctgcctcagcct-ccgagtagatgggattacaggcatgtgccaccacacccagctaatttttgtatttttaatagagacaaggtttcatcatgttggccaggctggtcttgaattcctgacctca i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75495356 226 - 121768101 AAtttt--------ttgagatggaatctcgctctgtagcccaggcttgagtgcagtg-gtgcaatctcggctcactgcagcttctgcctcctgggtcccggttcaagcaattcttctgcctcagcctcccgagtagctgagattacaggcacccaccaccatgcccagctaatttttgtatttttaatagaagcagagtt-----atgttggccaggctggtcttgaactcctgaccttg i calJac3.chr12 C 0 C 0 a score=550212.000000 s hg38.chr10_KI270825v1_alt 347 191 + 188315 aatgatccacctgcctcggcttcccaaattgctgggaatacaggcttaagccaccacgcccaacctaagccttttaattttT--AAAAATGTTTTCCAGGGTGATCATTTCCTTTCTTTTAATTTGCATTATTTTGAATGTTCATAGAAGCTTTA-----TTCATTTTTTGATTGACTATcaaaaaatattcagatgt s panTro4.chr10 76370932 191 + 133524379 aatgatccacctgcctcggcttcccaaattgctgggaatacaggcataagccaccacgcccaaccTAAGCCTTTTAATTTTT--AAAAATGTTTTCCAGGGTGATCATTTCCTTTCTTTTAATTTGCATTATTTTGAATGTTCATAGAAGCTTTA-----TTCATTTTTTGATTGACTATcaaaaaatattcagatgt i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76038736 189 - 133410057 aatgatccacctgcttcggcctcccgaaatgctgggattacaggcatgagcca-cgtgcccAACATAAG-CGTTTAATTTTT--AAAAATGTTTTCCAGGGTGATCATTTCCTTTCTTTTAATTTGCATTATTTTGAATGATCATAGAAGCTTTA-----TTCATTTTTTGATTGACTATcaaaaaatattcaggtgt i ponAbe2.chr10 N 0 C 0 s nomLeu3.chr18 34978447 192 + 104879549 aatgatccacccgcctctgcctcccaaattgctgggattataggcatgagccactgtgcccaaccTAAGCCTTTTAATTTTT--AAAACTTTTTTCCAGGGTGATCATTTC----CTTTTAATTTGCACTATTTTGAATGTTCATAGAAGCTTTATTCATTTCATTTTTTGATTGACTATcaaaaaatattcaggtgt i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73774885 196 - 130959383 aatgatccacccgcctcggcctcccaaattgctgggattacaggcatgagccaccgcgcccaaccTAAGCCttttaattttt--aaaaattttttCCAGGGTGATCATTTCCTTTCTTTTAATTTGCATTATTTTGAATGGTCATAGAAGCTTTATTCATTTCATTTTTTGATTGACTATcaaaaaatattcaggtgt i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75337136 196 - 133195287 aatgatccacccgcctcggcctcccaaattgctgggattacaggcatgagccaccgcacccaaccTAAGCCTTTTAATTTTT--AAAAATTTTTTCCAGGGTGATCATTTCCTTTCTTTTAATTTGCATTATTTTGAATGGTCATAGAAGCTTTATTCATTTCATTTTTTGATTGACTATcaaaaaatattcaggtgc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73201217 196 - 125196307 aatgatccacccgcctcggcctcccaaattgctgggattacaggcatgagccactgcgcccaacctaagccttttaattttt--aaaaattttttccagggtgatcatttcctttcttttaatttgcattattttgaatggtcatagaagctttattcatttcattttttgattgACTATCAAAAAATATTCAGGTGC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72033205 196 - 125710982 aatgatccccccgcctcggcctcccaaattgctgggattacaggcatgagccaccgtgcccaacctaagccttttaattttT--AAAAATTTTTTCCAGGGTGATCATTTCCTTTCTTTTAATTTGCATTATTTTGAATGGTCATAGAAGCTTTATTCATTTCATTTTTTGATTGACTATcaaaaaatattcaggtgc i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75495582 196 - 121768101 --tgatccacccatctcagcctcccaaagtgctgggattacaggcatgaaccaccatacttgaccTAAGCCTTTTAATTTTTCAAAAAAATTTTTCCAGGGTAATCATTTTCTTTCTTTTAATTTGCATTATTTTGAATGTTCACAGAAGCTTTATTCATTTCACtttttgattgacaaataataattgtacatatat i calJac3.chr12 C 0 I 770 a score=332899.000000 s hg38.chr10_KI270825v1_alt 538 137 + 188315 ggtg-gcagatgcctgtaatcccagcctctttggagactgaggcaggagaatctcttgaacccaggaggcagaggttgcagtgagctgagatcgcgccattgcactccagcctgggtgacaagagcgaaactccattg s panTro4.chr10 76371123 137 + 133524379 ggtg-gcagatgcctgtaatcccaacctctttggaggctgaggcaggagaatctcttgaacccaggaggcagaggttgcagtgagctgagatcgcgccattgcactccagcctgggtgacaagagtgaaactccattg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76038925 137 - 133410057 ggtg-gcggatgcctgtaatcccagcctctttggaggctgaggcaggagaatctcttgaacccaggaggcagaggttgcagtgagctgagatcgcgcctttgcactccagcctgggtgacaagagcgaaattccattg i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34978639 135 + 104879549 ggtg-gcggatgcctgtaatcccagcctctttggaggctgaggcaggagaattgcttgaacccaggaggcagaggttgcagtgagctgagatcgcaccattgcaccccagcctgggtgac--gagcgaaactccatca i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73775081 138 - 130959383 ggtgagtggatgcctgcaatcccagcctctttggaggctgaggcaggagaatcacttgaacccaggaggcagaggttgcagtgagctgagatcacgccattgcactctagcctgggtgacaggagcgaaactccattg i rheMac3.chr9 C 0 I 1 s macFas5.chr9 75337332 138 - 133195287 ggtgagtggatgcctgcaatcccagcctctttggaggctgaggcaggagaatcacttgaacccaggaggcagaggttgcagtgagctgagatcgcgccattgcactctagcctgggtgacaggagcgaaactccattg i macFas5.chr9 C 0 I 2 s papAnu2.chr9 73201413 138 - 125196307 GGTGGGtggatgcctgcaatcccagcctctttggaggctgaggcaggagaatcacttgaacccaggaggcagaggttgcagtgagctgagatcgcgccattgcactctagcctgggtgacaggagcgaaactccattg i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72033401 138 - 125710982 ggtgggtggatgcctgcaatcccagcctctttggagtctgaggcaggagaatcacttgaacccaggaggcagaggttgcagtgagctgagatcgcgccattgcactctagcctgggtgacaggagcgaaactccattg i chlSab2.chr9 C 0 I 259 e calJac3.chr12 75495778 770 - 121768101 I a score=2255809.000000 s hg38.chr10_KI270825v1_alt 675 968 + 188315 aaaaaaaaa---aTTGTCTCCAAACACTAGAgtaactgtacacaaaatgtagctctgagctgcgcagccaaagcagggaagggagcagatgagtgacattagactctttgactagtacaaagaTATTTATAAATATATGTacaaataatcattgtacatattcattggggttcatagtgatgttttgatagaaatgttatcatgattagatcagggtgattagcatatccatcatctcaaaca-ttatcatttctttgtgttggaaatattcaatatcctccctctagctatttgaaactatatattgttattaactacaaccttcctacagtgatacagaagactgtaactttttTAAAAATTACCTTTTATTTGAGTAtttttaattgagataaaatatacatatataatttaccacctttaccatttttaagtgtacagtttagtggtaATGAAGATGTTTAtttatttattccccctccttcctccccttccccagcctctggtaaccactaatctactgtctaTGAGGTGAAGAGGAAAGGTCTAAGatcgtttgcacatgttttcttccattctacaggttccctcttcactttgttgattgttttctttgctgtgcagaagcttttttagtttgatgtaatccaaagtatcattttgggggccacgcatggtggctcacacctgtaatcccagcactttgggagcctcaggcgggcagatcacatgaggccaggagtccgagaccagcctggccaatatggtgaaaccccatctctactaaaaatacaaaaattagccgggtgtggtggtgcacacctgtaatcccaactacttgggag--gctgaggcacgagaatcacttgaaccagggaggcagaggttgcagtaacccgagattgcaccactacactcgg-gcctgggtgacagagtaagactctgtctcaaaaaaaaaaaaaaaaaaaaaa-------GT s panTro4.chr10 76371260 975 + 133524379 aaaaaaaaa----TTGTCTCCAAACACTAGAgtaactgtacacaaaatgtagctctgagctgcgcagccaaagcagggaagggagcagatgagtgacattagactctttgactagtacaaagaTATTTATAAATATATGTacaaataatcattgtacatattcattggggttcatagtgatgttttgatagaaatgttatcatgattagattagggtgattagcatatccatcatctcaaacacttatcatttctttgtgttggaaatattcaatatcctccctctagctatttgaaactatatattgttattaactacaaccttcctacagtgatacagaagactgtaacttTTTTAAAAATTACCTTTTATTTGAGTAtttttaattgagataaaatatacatatataatttaccacctttaccatttttaagtgtacagtttagtggtaATGAAGATGTTTATTTAtttattccccctccttcctccccttccccagcctctggtaaccactaatctactgtctaTGAGGTGAAGAGGAAAGGTCTAAGatcgtttgcacatgttttcttccattctacaggttccctcttcactttgttgattgttttctttgctgtgcagaagcttttttagtttgatgtaatccaaagtatcattttgggggccacgcatggtggctcacacctgtaatcccagcactttgggagcctcaggcgggcagatcacatgaggccaggagtccgagaccagcctggccaatatggtgaaaccccatctctactaaaaatacaaaaattagccgggtgtggtggtgcacacctgtaatcccaactacttgggag--gctgaggcacgagaatcacttgaaccagggaggcagaggttgcagtaacccgagattgcaccactacactcgg-gcctgggtgacagagtaagactctgtctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaGT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76039062 969 - 133410057 aaaaaaaaa--aaTTGCCTCCAAACACTAGAGTAACTGTACACAaaatgtagctctgagctgcgcagccaaagcagggaagggagcaggtgagtgacatTAGACTCTTTGACTAGTACAAAGATATTTATAAATATATGTAGAAataatcattgtacatattcattggggttcatagtgatgttttgatagaaatgttatcatgattagatcaggatgattagcatatccatcatctcaaacacttatcatatctttgtgttggaaatattcaatatcctccctctagctatttgaaactatatattgttattaactacaatcttcctacagtgatacagaagactgtaacttTTTTAAAAATTACCTTTTATTTGGGTAtttttaattgagataaaatatacatatgtaatttaccacctttaccatttttaaatgtacagtttagtggtaatgaagatgtttaTTTAtttattccccctccttcctcccctt-cccagcctctggtaaccactaatctactgtctatgaggtgaaGAGGAAAGGTCTAAGatcgtttgcacatgttttcttccattctacaggttccctcttcactttgttgattgttttctttgctgtgcagaagcttttttagtttgatgtaatccaaagtatcattttgggggccacgcatggtggctcacacctgtaatcccagcactttgggaggctgaggcgggcagatcacatgaggccaggagtccgagaccagcctggccaatatggtgaaaccccatctctactaaaaatacaaaaattagctgggtgtggtggtacacacctgtaatcccggctactgggggggtgctgaggcatgagaatcacttgaacctgggaggcagaggttgcagtaacctgagattgcaccactacactcgg-gcctgggtgacagagtaagactctgtctcaaaaaaaaaaaaaaaaaaaa---------gt i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34978774 969 + 104879549 aaaaaaaaaaaaaTTGCTTCCAAACGCTAGAgtaactgtacacaaaatgtagctctgagctgcgcagccaaagcagggaagggagcagatgagtgacattagactctttgactagtacaaagaTATGTATAAATATATGTacaaataataattgtacatattcattggggtttatagtgatgttttgatagaaatgttatcatgattagatcagggtgattagcatatccatcatct----cacttatcatttctttatgttggaaatattcaatatcctcccgctagctatttgaaactatatattgttattaactataatcttcctacagtgatacagaagactgtaacttTTTTTAAGATTACCTTTTATTTGGGTAtttttaactgagataaaatatacatatataatttaccatctttaccatttttaaatgtacagtttagtggtaatgaagatgtttatttgtttattccccttccttcctcccctt-cccagcctctggtaaccaccagtctaccgtctatgaggtgaaGAGGAAAGGTCTAAGATCAtttgcacatgttttcttccattctacaggttccctcttcacttttttgattgttttctttgctgtgcagaagcttttttagtttgatgtaatccaaagtatcattttgggggccacgcatggtggctcacacctgtaatcccagcactttgggaggctgaggtgggcagatcac--gaggccaggagtttaagaccagcctggccaatatagcaaaatcccatctctactaaaaacacaaaaattagccgggtatggtggtgcacacct-taatcccagctacttgggag--gctgaggcacgagaatcacttgaaccggggaggcagaagttgcagtaacctgagattgcaccactacactcgg-gcctgggtgacagagtgagactctgtctcaaaaaaaaaaaaaaaaaaaaaaaaaaG--AT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73775220 970 - 130959383 aaaaaaaaa---aTTGCCTCCAAACGCTAGAgtaactgtacacaaaatgtagctctgtgttgcacagccaaagcagagaagggagcagatgagtgacattagactctttgactagtacaaagaTATGTATAAATATATGTATAAatcataatcatacatattcattggggtacatagtgatgttttaatagatatgttatcataattagatcagggtgattaccatatccatcatctcaaacacttatcatttctttgtattggggatattcactatcctccctctagctatttgaaactatatattgttattaactataatcttcctacagtggtatagaaggctgtaacttTTTTTAAAATTACCTTTTATTTGTGTAtttttaattgagataaaatatacatatataatttaccatctgtaccacttttaaatgtacagtttagtggaaatgaagacatttaTTTAtttattccccccccttcctcccctt-cccagcctctggtaaccaccaatctactgtctaTGAGGTGAAGAGGAAAGGTATAAGatagtttgcacatgttttcttccattctacaggttctctcttcactttgttgattgttttccttgctgtgcagaaga-tttttagtttgatgtaatccaaagtatcattttgggggccaggcatggtggctcacacctgtaatcccagcactttgggaggctgaggcgggcagatcacatgaggccaggagttcgagaccagcctggccaatatggcgaaaccccatctctactaaaaatacaaaaattagccggctgcggtggtatgcacctgtcatcccagctacttggaag--gttgaggcatgagaatcgcttgaactggggaggcagaggttgcagtaacctcagattgcaccactacactcgg-ccctgggtggcacagtgagactgtgtctctaaaacaaaaacaaaaacaaaaaca----ag i rheMac3.chr9 I 1 C 0 s macFas5.chr9 75337472 970 - 133195287 aaaaaaaaa---aTTGCCTCCAAACGCTAGAGTAACTGTACACAAAATGTAGCTCTGTGTTGCACAGCCAAAGCAGAGAAGGGAGCAGATGAGTGACATTAGACTCTTTGACTAGTACAAAGATATGTATAAATATATGTATAAatcataatcatacatattcattggggtacatagtgatgttttcatagatatgttatcataattagatcagggtgattaccatatccatcatctcaaacacttatcatttctttgtattggggatattcactatcctccctctagctatttgaaactatatattgttattaactataatcttcctacagtggtatagaaggctgtaacttTTTTTAAAATTACCTTTTATTTGTGTAtttttaattgagataaaatatacatatataatttaccatctgtaccacttttaaatgtacagtttagtggaaatgaagacatttaTTTAtttattccccctccttcctcccctt-cccagcctctggtaaccaccaatctactgtctaTGAGGTGAAGAGGAAAGGTATAAGatagtttgcacatgttttcttccattctacaggttctctcttcactttgttgattgttttccttgctgtgcagaaga-tttttagtttgatgtaatccaaagtatcattttgggggccaggcatggtggctcacacctgtaatcccagcattttgggaggctgaggcgggcagatcacatgaggccaggagttcgagaccagcctggccaatatggcgaaaccccatctctactaaaaatacaaaaattagccggctgcggtggtacgcagctgtcatcccagctacttggaag--gttgaggcatgagaatcgcttgaactggggaggcagaggttgcagtaacctcagattgcaccactacactcgg-ccctgggtggcacagtgagactgtgtctcTaaaacaaaaacaaaaacaaaaaca----ag i macFas5.chr9 I 2 C 0 s papAnu2.chr9 73201551 966 - 125196307 aaaaaaaaa---attgcctccaAATGCTAGAGTAACTGTACACAAAATGTAGCTCTGTGTTGCACAGCCAAAGCAGAGAAGGGAGTAGATGAGTGACATTCGACTCTTTGACTAGTACAaagatatgtataaatatatgtataaatcatAATCGTACATATTCattggggtacatagtgatgttttaatAGATATGTTATCATAATTAGATCAGGGtgattagcatatccatcatctcaaacacttatcatttctttgtattggggaTATTCACTATCCTCcctctagctatttgaaactatatattgttattaactataatcttcctacagtggtatagaaggctgtaactttttttaaaattacct----tttgtgtatttttaattgagataaaatatacatatataatttaccatCTGTACcacttttaaatgtacagtttagtggaaatgaagacatttatttatttattccccctccttcctcccctt-cccagcctctggtaaccaccaatctgctGTCTATGAGGTGAAGAGGAAAGGTGTAAGATAGTTTGCacatgttttcttccattctacaggttctctcttcactttgttgattgttttccttgctgtgcagaaga-tttttagtttgatgtaatccaaAGTATCAttttgggggccaggcatggtggctcacacctgtaatcccagcactttgggaggctgaggcgggcagatcacatgaggccaggagttcgagaccagcctggccaatatggcgaaaccccatctctactaaaaatacaaaaattagccggctgcggtggtacgcacctgtcatcccagctacttggaag--gttgaggcatgagactcgcttgaactggggaggcagaggttgcagtaacctcagattgcaccactacactcggcccctgggtgacacagtgagactgtgtctctaaaacaaaaataaaaacaaaaa-a----ag i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72033798 962 - 125710982 aaaaCAAAA---ATTGCCTCCAAACGCTAGAGTAACTGTACACAAAATGTAGCTCTGTGTTGCACAGCCAAAGCAGAGAAGGGAGCAGATGAGTGACATTAGACTCTTTGACTAGTACAAAGATATGTATAAATATATGTATAAatcataatcgtacatattcattggggtacatagtgatgttttaatagatatgttatcataattagatcagggtgattagcatatccatcatctcaaacacttaccatttctttgtattggggatattcactatcctccctctagctatttgaaactatatattgttattaactataatcttcctacagtggtatagaaggctgtaacttTTTTAAAAATTACCT----TTTGTATATTT----ttgagataaaatatacatatataatttaccatctgtaccacttttaaatgtacagtttagtggaaatgaagacatttaTTTAtttattccccctccttcctcccctt-cccagcctctggtaaccaccaatctactgtctaTGAGGTGAAGAGGAAAGGTGTAAGatagtttgcacatgttttcttccattctacaggttctctcttcactttgttgattgttttccttgctgtgcagaaga-tttttagtttgatgtaatccaaagtatcattttgggggccaggcatggtggctcacacctgtaatcccagcactttgggaggctgaggcaggcagatcacatgaggccaggagttcaagaccagcctgaccaatatggcgaaaccccatctctactaaaaatacaaaaagtagccggctgcggtggtacgcacctgtcatcccagctacttggaag--gttgaggcatgagaatcgcttgaactggggagacagaggttgcagtaacctcagattgcaccactacactcgg-ccctgggtgacacagtgagactgtgtctcTaaaacaaaaacaaaaacaaaaaca----ag i chlSab2.chr9 I 259 C 0 e calJac3.chr12 75495778 770 - 121768101 I a score=808093.000000 s hg38.chr10_KI270825v1_alt 1643 296 + 188315 ccaggtactgtggttcacgcctgttatcctagcactttgggaggctgaggtcggtggatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaacccagtctctactaaaaatacaaaaattagccaggtgtaacggcggatgcctgtaatcccagctactttggaggctgaggcagg-agaatcgcttgaacccaggag-----------------------------------------------------------------------------------------------gcaaaggttgcagtgagccgagatcgtgccattgcactccagcctgggcaacaagagtgaaactccattg----aaaaaa-------aaatcatttt s panTro4.chr10 76372235 296 + 133524379 ccaggtactgtggttcacgcctgttatcctagcactttgggaggctgaggtcggtggatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaacccagtctctactaaaaatacaaaaattagcgaggtgtaatggcggatgcctgtaatcccagctactttggaggctgaggcagg-agaatcacttgaacccaggag-----------------------------------------------------------------------------------------------gcaaaggttgcagtgagccgagatcgtgccattgcactccagcctgggcaacaagagtgaaactccattg----aaaaaa-------aaatcatttt i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76040031 297 - 133410057 ccaagtactgtggttcatgcctgttatcctagcactttgggaggctgaggtaggtggatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccaggtgtaatggcagatgcctgtaatcccagctactttggaggctgaggcagg-aaaatcgcttgtacccaggag-----------------------------------------------------------------------------------------------gcaaaggttgcagtgagccaagattgtgccattgcacgccagcctgggcaacaagagtgaaactccattg---aaaaaaa-------aaatcacttt i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34979743 298 + 104879549 ccaggtactgtggttcacgcctgtaatcccagcactttgggaggctgaggtaggtggatcacctgaggtcatgagttcgagactagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccaggtataatggcggatgcctgtaatcccagctactttggaggctgaggcaggaaaaatcacttgaacccaggag-----------------------------------------------------------------------------------------------acaaaagttgaagtgagccgaggtcatgccattgcactccagcctgggcaacaagagtgaaactccattg---aaaaaaa-------aaatcatttt i nomLeu3.chr18 C 0 I 1582 s rheMac3.chr9 73776190 295 - 130959383 ccaggtactgtggttcacacctgtaatcccagcactttgagaggctgaagtaggcagatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccaggtgtaatgacagatgcttgtaatcccagctactttggagac--aggcagg-agaatcgtttgaacccaagag-----------------------------------------------------------------------------------------------gcgaaggttgcagtgagccaagatcatgccattgcactccagcctgggcaacaagagcgaaactccactg---aaaaaaa-------aaatcatttt i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75338442 298 - 133195287 ccaggtactgtggttcacacctgtaatcccagcactttgagaggctgaagtaggcagatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccaggtgtaatgacagatgcttgtaatcccagctactttggagac--aggcagg-agaatcgtttgaacccaagag-----------------------------------------------------------------------------------------------gcgaaggttgcagtgagccaagatcatgccattgcactctagcctgggcaacaagagcgaaactccactgaaaaaaaaaa-------aaatcatttt i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73202517 292 - 125196307 ccaggtactgtggttcacacctgtaatcccagcactttgagaggctgaagtaggcagatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccaggtgtaatgacagatgcttgtaatcccagctactttggagac--aggcagg-agaatcgtttgaacccaggag-----------------------------------------------------------------------------------------------gcgaaggttgcagtgagccaagatcatgccattgcactccagcctgggcaacaagagcgaaactccactg--aaaaaaaa-------aaagca---- i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72034760 298 - 125710982 ccaggtactgtggttcacacctgtaatcccagcactttgagaggctgaagtaggcagatcacctgaagtcaggagtttgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccaggtgtaataacagatgcttgtaatcccagctactttggagactgaggcagg-agaatcgtttgaacccaggag-----------------------------------------------------------------------------------------------gcaaaggttgcagtgagccaagatcatgccattgcactccagcctgggcaacaagagcggaactccactg--gaaaaaaa-------aaatcatttt i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75496548 397 - 121768101 ccaggca-tgtggctcacgcctgtaatctcagcactttgggaggctgaggcaggcagatcacataaggacaggagtttgagaccaggctggccaacatggtgaaaccctg-ccctgctaaaaatacaaaagttagctgggcatggtggtgcacacctgtcatcccagctacttgggaggctgaggctca-agaattgcttgaacccaggaggtagaggctgcagtgagctgagtgcaccactacactcaggcctgggcaacaagagtgagactctgtctcaaaaaaataagaaaagaaaaaaggcagcagaggtagcagtgagccgagattgcgccattgcactccagcctggatgacaagagcgaaactctgtct---caaaaaaTATATACATGTTATTTT i calJac3.chr12 I 770 C 0 a score=475448.000000 s hg38.chr10_KI270825v1_alt 1939 177 + 188315 tgctttggttgcctctgcttttcatgtcttacagaaaaaa--atctttgctcagaccaatgtcctggagcattttcccaatgttttcttctagtagcttt--gtagtttcaggtcttggatttaagtctctaatccatttttattttatttttgtgtatggtgagacacaggagcctagtt s panTro4.chr10 76372531 177 + 133524379 tgctttgtttgcctctgcttttcatgtcttacagaaaaaa--atctttgctcagaccaatgtcctggagcattttcccaatgttttcttctagtagcttt--gtagtttcaggtcttggatttaagtctctaatccatttttattttatttttgtgtatggtgagacacaggggcctagtt i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76040328 178 - 133410057 tgctttggttgcctctgcttttcatgtcttacagaaaaaa--atctttgctcagaccaatgtcctggagcattttccc-atgttttcttctagtagcttctagtagtttcaggtcttggatttaagtctctaatccattttgattttatttttgtgtatggtgagacacaggggcctagtt i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34981623 176 + 104879549 tgctttggttgcttctgcttttcaggtcttacag-aaaaa--atctttgctcagaccaatgtcctggagcattttcccaatgttttcttctagtagcttt--gtagtttctggtcttggatttaagtctctaatccatttttattttatttttgtgtatggtgagaaacaggggcctagtt i nomLeu3.chr18 I 1582 C 0 s rheMac3.chr9 73776485 179 - 130959383 tgctttggttgcctctgctttttatgtcttacagaaaaaaatatctttgctcaggccaatgtcctggagcattttcccaatgttttcttctagtagcttt--gtagtttcaggtcttggatttaagtctctaatctattttgatttgatttttgtgtatggtgagagacaggggcctagtt i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75338740 179 - 133195287 tgctttggttgcctctgctttttatgtcttacagaaaaaaaaatctttgctcaggccaatgtcctggagcattttcccaatgttttcttctagtagcttt--gtagtttcaggtcttggatttaagtctctaatctattttgatttgatttttgtgtatggtgagagacaggggcctagtt i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73202809 173 - 125196307 ------ggttgcCTCTGCTTTTTAtgtcttacagaaaaaaatatctttgcTCAGGCCAACGTCCTGGAGcattttcccaatgttttcttctactagcttt--gtagtttcaggtcttggatttaagtctctaatctattttgatttgatttttgtgtatggtgagagacaggggcctagtt i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72035058 179 - 125710982 tgctttggttgcctctgctttttatgtcttacagaaaaaaatatctttgctcaggccaatgtcctggagcattttcccaatgttttcttttggtagcttt--gtagtttcaggtcttggatttaagtctctaatctattttgatttgatttttgtgtatggtgagagacaggggcctagtt i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75496945 131 - 121768101 TGCTTTGGTTCCCTTTGCTTTTCATGTCTTACAAAAAAAAATAT------------------------------------------------gtagtttc--atcatttcaggtcttggatttaagtctctaatccattttgatgtggtttttgtgtgtggcgggagacaggggcctagtg i calJac3.chr12 C 0 C 0 a score=14940.000000 s hg38.chr10_KI270825v1_alt 2116 4 + 188315 tcat s panTro4.chr10 76372708 4 + 133524379 tcat i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76040506 4 - 133410057 tcat i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34981799 4 + 104879549 tcat i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73776664 4 - 130959383 tcat i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75338919 4 - 133195287 tcat i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73202982 4 - 125196307 tcat i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72035237 4 - 125710982 tcat i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75497076 4 - 121768101 tcct i calJac3.chr12 C 0 C 0 s mm10.chr14 24081588 4 + 124902244 TCAT i mm10.chr14 N 0 C 0 a score=1978164.000000 s hg38.chr10_KI270825v1_alt 2120 570 + 188315 tct---tTCCAGGcccatccccaggagatttggtaaggactggggcctgggactcagcatttaaaacaaatattctagatgattctgattcaggtgtcctgtgaccacacttcggaaaACTTGCCCTAGG---TGAAGTTTGGCATTAGATTTCTCCCCTGGATCAGAATCAGGCTGTGTTTGACCATCTGATAGGGA-TCCTGAAACATCCCCAAG--CCTAGCATTTCTAATATAGGGCTGGAGGTGACATTGGAGCAATTGATGA-CACAGAGTGTGATGTAAAAGATCACAAATG-GATCAGAG-AGAGGATACTTGGGTTTTAGTCCCAGCCTGGAAGACTCTGACCAAGCCTTGCCTCGCTTCTGT--AAAATACAGTTAAACAGTCACCGCCCCGTCAACCCCAGCAA-GCAGGT---GAGCACCAACTGAAAGTTCCTGAATAACTG--------T------CATGGGCAGTTGGGAGGCTCAGCCCCACCCATGTTGCCAGGGAAACCAGACCTCCTGAGC-CGGGACTAGACTCTCAGGCTCAGTGGCCAGTGTGACTCGATCCACTGA--AGAGGAAACCTGCAAAAAGAGCTA s panTro4.chr10 76372712 570 + 133524379 tct---tTCCAGGcccatccccaggagatttggtaaggactggggcctgggactcagcatttaaaacaaatattctagatgattctgattcaggtgtcctgtgaccacacttcggaaaACTTGCCCTAGG---TGAAGTTTGGCATTAGATTTCTCCCCTGGATCAGAATCAGGCTGTGTTTGACCATCTGATAGGGA-TCCTGAAACGTCCCCAAG--CCTAGCATTTCTAATATAGGGCTGGAGGTGACATTGGAGCAATTGATGA-CACAGAGTGTGATGTAAAAGATCACAAATG-GATCAGAG-AGAGGATACTTGGGTTTCAGTCCCAGCCTGGAAGACTCTGACCAAGCCTTGCCTCACTTCTGT--AAAATACAGTTATACAGTCAGCGCCCGGTCAAGGCCAGCAA-GCAGGT---GAGCTCTAACTGAAAGTTCTTGAATAAGTG--------T------CATGGGCAGTTGGGAGGCTCAGCCCCATCCATGTGGCCAGGGAAACTATACCTCATGAGC-AGGGACTAGTCTCTCATACTCAGTGGCCAGTGTGACTCGATCCACTGA--AGAGGAAGCCTGCAAAAAGAGCTT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76040510 570 - 133410057 tct---ttcctggcccatccccaggagatttggtaaggactggggcctgggactcagcatttaaaacaaatattctagatgattctgattcaggtgtcctgtgaccacactttggaaaACTTGCCCTAGG---TGAAGTTTGGCCTTAGATTTCTCCCCTGGATCAGAATCAGGCCGTGTTTGATCATCTGATAGGGA-TCCTGAAATGTTGCCAAG--CCTAGCATTTCCAATATAGGGCTGGAGGTGACATTGGAGCCATTGATAA-CACAGAGTGTGATGTGGAAGATCACAAATG-GATCAGAG-AGAGGATACTTGGGTTTTAGTCCCAGCCTGGAAGACTCTGACCAAGACTTGCCTCGCTTCTGT--AAAATACAGTTAAACAGTCACCACCCCGTCAACCCCAGCAA-GCAGGT---GAGCACCAACTGAAATTTCCTGAATAACTG--------T------CATGGGCAGTTGGGAGGCTCAGCCCCACCCATGTTGCCAGGGAAACCAGACCTCCTGAGC-TGGGACTAGACTCTCAGACTCAGTGGCCAGTGTGACTGGATCCAGTGA--AGAGGAAACTTGCAAAAAGAGCTA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34981803 571 + 104879549 tct---tTCCAGGcccatccccaggagatttggtaaggactggggcctgggactcagcatttaaaa-aaatattctagatgattctgattcaggtgtcctgtgaccacactttggaaaACTTGCCCTAGG---TGAAGTTTGGCATTAGATTTCTCCCCTGGATCAGAATCAGGCCGTGTCTGACCATCTGATAGGGA-TCCTGAAATGCCCCCAAG--CCTAGCATTTCCAGTATAGGGCTGGAGGTGACATTGAAGCCATTGATGA-CACAGAATGTGATGTGGAAGATCACAAATA-GATCAGAG-AGAGGATACTTGGGTTTTAGTCCCAGCCTAGAAGACTCTGACCAAGCCTTGCCTCGCTTCTGT--AAAATACAGTTAAACAGTCACCGCCCTGTCAACCTCAGCAA-GCAGGT---GAGCACCAACTGAAAGTTCCTGAATAACTG--------T------CATGGGCAGTTGGGAGGCTCAACCCCACCCATGTTGCCAGGGAAACCAGACCTCCTGAGC-CGGGACCAGACTCTTAGACTCAGTGGCCAGTGTGACTGGATCCAGTGAAGAGAGGAAACCTGCAAACAGAGCTA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73776668 573 - 130959383 tct---tTCCAGGcccatccccaggagatttggtaagaactggggcctgggactcagcatttaaaacaaatatcctaaatgattctgattcaggtgtcctgtgaccacactttggaaaACTTGCCCTGGG---TGAAGTTTGGCATTAGATTTCTTCCCTGGATCAGAATCAGGCCATGTTTGACCATCTGGTAGGGA-TCCTGAGATGTCCCCAAG--CCTAGCATTTCCAATATAGGGCTGGAGGTGACATTGGAGCCATTGATGACCACAGAGTGTGATGTGGAAGATCACAAATG-GATCAGAG-AAAAGATACTTGGGTTTTAGTCCCAGCCTAGAAGACTCTGACCAAGCCTTGCCTTGCTTCTGT--AAAATACAGTTAAACAGTCACTGCCCCGTCAACCTCAGCAA-GCAGGT---GAGCACCAACTGAAAGTTCCTGAATAACTG--------T------CATGGGCAGTTGGGAGGCTCAGCCCCACCCATGTTGCCAGGGAAACCAGACCTCCTGAGC-GGAGACCAGACTCTCAGACTCAGTGGCCAGTGTGACTGGATCCCGTGAAGAGAGGAAACCTGGAAAAAGATCTA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75338923 573 - 133195287 tct---tTCCAGGcccatccccaggagatttggtaagaactggggcctgggactcagcatttaaaacgaatatcctaaatgattctgattcaggtgtcctgtgaccacactttggaaaACTTGCCCTGGG---TGAAGTTTGGCATTAGATTTCTTCCCTGGATCAGAATCAGGCCATGTTTGACCATCTGGTAGGGA-TCCTGAGATGTCCCCAAG--CCTAGCATTTCCAATATAGGGCTGGAGGTGACATTGGAGCCATTGATGACCACAGAGTGTGATGTGGAAGATCACAAATG-GATCAGAG-AAAAGATACTTGGGTTTTAGTCCCAGCCTAGAAGACTCTGACCAAGCCTTGCCTTGCTTCTGT--AAAATACAGTTAAACAGTCACTGCCCCGTCAACCTCAGCAA-GCAGGT---GAGCACCAACTGAAAGTTCCTGAATAACTG--------T------CATGGGCAGTTGGGAGGCTCAGCCCCACCCATGTTGCCAGGGAAACCAGACCTCCTGAGG-GGAGACCAGACTCTCAGACTCAGTGGCCAGTGTGACTGGATCCAGTGAAGAGAGGAAACCTGGAAAAAGATCTA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73202986 574 - 125196307 tct---ttcCAGGCCCATCCCCAGGAGATTTGGTAAGAACTGGGGCCTGGGACTcagcatttaaaacaaatatcCTAAATGATTCTGATTCAGGTGTCCTGTGACCACACTTTGGAAAACTTGCCCTGGG---TGAAGTTTGGCATTAGATTTCTTCCCTGGATCAGAATCAGGCCACGTTTGACCATCTGGTAGGGA-TCCTGAGATGTCCCCAAG--CCTAGCATTTCCAATATAGGGCTGGAGGTGACATTGGAGCCATTGATGACCACAGAGTGTGATGTGGAAGATCACAAATG-GATCAGAGAAAAAGATACTTGGGTTTTAGTCCCAGCCTAGAAGACTCTGACCAAGCCTTGCCTTGCTTCTGT--AAAATACAGTTAAACAGTCACCGCCCCGTCAACCTCAGCAA-GCAGGT---GAGCACCAACTGAAAGTTCCTGAATAACTG--------T------CATGGGCAGTTGGGAGGCTCAGCCCCACCCATGTTGCCAGGGAAACCAGACCTCCTGAGC-GGAGACCAGACTCTCAGACTCAGTGGCCAGTGTGACTGGATCTAGTGAAGAGAGGAAACCTGGAAAAAGATCTA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72035241 573 - 125710982 tct---tTCCAGGcccatccccaggagatttggtaagaactggggcctgggactcagcatttaaaacaaatatcctaaatgattctgattcaggtgtcctgtgaccacacgttggaaaACTTGCCCTGGG---TGAAGTTTGGCATTAGATTTCTTCCCTGAATCAGAATCAGGCCATGTTTGACCATCTGGTAGGGA-TCCTGAGATGTCCCCAAG--CCTAGCATTTCCAATATAGGGCTGGAGGTGACATTGGAGCCATTGATGACCACAGAGTGTGATGTGGAAGATCACAAATG-AATCAGAG-AAAAGATACTTGGGTTTTAGTCCCAGCCTAGAAGACTCTGACCAAGCCTTGCCTTGCTTCTGT--AAAATACAGTTAAACAGTCACCGCCCTGTCAACCTCAGCAA-GCAGGT---GAACACCAACTGAAAGTTCCTGAATAACTG--------T------CATGGGCAGTTGGGAGGCTCAGCCTCACCCATGTTGCCAGGGAAACCAGACCTCCTGAGC-CGAGACCAGACTCTCAGACTCAGTGGCCAGTGTGACTGGATCCAGTGGAGAGAGGAAACCTGGAAAAAGATCTA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75497080 571 - 121768101 tct---tTCCAGGCCCATCCCCAGGAgatttggtaaggactggggcctgggactcagcatttaaaacaaatatcctaggcaattctgattcagatgtcccctgaccatgctttAGAAAACTTGCCCTAGG---TGAAGTTTGGCATTAAATTTCTCCCCTGGATCAGAATCAGTCCATGTTTCACCATCTGGTAGGGATTTTTGAAATGCCCCCAAG--CCTAGCATTTCCAATATAAGGCTGGAGATGACATTGGAGCCATTGATGA-CAAACGTGGTGATGTGGAAGATCACAAATG-GATCAGAG-AGAAGATACTTGGGTTTTAGTCCCAGCCTAGAAGACTCTGACCAAGCTTTGCTTCGCATCTGTAAAAAATACAGTTAGACAGTTGCTGCCCCATCAACCTCAGCAA-GCAGGC---AACCACCAACCTAAACTTCCTGAATAACGG--------T------CATGGGCAGTTGGGAGGCTTAGCTCCACCCATGTTGCCAGGGCAACCAGACCTCCTGAGC-TGGGCCCAGCCTCTCAGACTCAGTGGCCAGTGTGACTGGGTCCA--GAAGAGAGGAAACCTGGAA--AGAGCTA i calJac3.chr12 C 0 C 0 s mm10.chr14 24081592 571 + 124902244 CCTAAATTCAACACCTTTCCTTCACAAATTTGGTATGTAGAATGGCCTGGGACTCAGCATTTCATACAAGTATCTTGGAGGAGTCTGGCTCCG--GTCCTCTGAGCACACTTTGGAAAACGTGCTCTATGCCCTACCATT----ATTATATATCCTTCAGCGGTTGGAAGCAGGTCATGTTTGTGCATCTAAGTCTGG-CTGTGAGATTCCCTCAAACCCCCACCATTTCCAATTTAGGGATGAGAGTGGTACTGGAGCTGGGTCTGG-CAAAGAATAGCGTG---AAGACCGAGAATGAGCTCAGAG-AAAGGATA-------TCAAGTGCCACTTTAAACGATGCTGACCAAGCCACACTCCTCAGCCAA--AGGTTGCAGTTAAACAGTCATTGCCCACTCTCCTCCTGAAAGGCAGGT---GACCAGCAACTGAAACTTCTTGAATGACTGTTAATCCTT------CATTGGCAGTTAGTAAGTTTAGCCCCACCTCCGTTGCT-GGGCAACCTGACTTGGCAGGCACTGGCCCCACCTCCCAGGTTCATAAGCTAAAGCCGCTTGG-CTGTGGAAAAGAGCAGAGC--ACAAGAAAGCTA i mm10.chr14 C 0 C 0 s canFam3.chr4 27652550 482 + 88276631 tct---tcccaggcccatgcccaggag--taggtggaca-----acctgggacttggcatttgcaacaagcatcctagaggattctgattcaggtgtcctgagaccacacttcggaaaactgGCCCTTAG---TGGACTTCGGCATTAGATTTTTCTCCTGGATCAGACTCAGGCCATATTTGATCATCTGGTAAGAG-CCCTGACCTGCCCGAAGG--CCCAGCATTTCCAGTTGAGGGCCAGAGCTGCTCCTGGAGCTCATCGTGG-CAGATAGTGTGATATGTCTTCT---------CTTCATAG-AGAGGCTGCCTGTGTTTTCATTCCAGTTTAAGTGA--CTGATCAAGCCATGCCCCTGGTCTCA--GAAATGCTGTTAAATATTTGCTGCCTGG-AAACCCCTTCTA-GTTGGCACAGAGGACCAAC-GGAAGTTCTTGAATAACTG--------TCATCCGCATTGGCAGTTGGT-GGCTTAGCCCTG-CCACGTTGCCAGGGCAACCGGGGCACCT------------------------------------------------------------------------------- i canFam3.chr4 N 0 C 0 a score=146377.000000 s hg38.chr10_KI270825v1_alt 2690 107 + 188315 CCAAAGA-AGCCTGCAGGGGTGCTGCCCCTGGCCCTGAGGCTGGAGAGAGTCTTGAAGA-TGAG--GAGAAA--GGGAGAAGGGCAGTCCC-----TTCAGGGCTTAGGGAACCAGGC s panTro4.chr10 76373282 107 + 133524379 CCAAAGA-AGCCTGTAGGGGTGCTGCTCCTGGCCCTGAGGCTGGAGAGAGGCTTGAAGA-TGAG--GAGAAA--GGGAGAAGGGCAGTCCC-----TTCAGGGCTTAGGGAACCAGGC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76041080 108 - 133410057 CGGAAGA-AGCCTGCAGGGGTGCTGCTCCTGGCCCTGAGGCTGGAGAGAGGCTTGAAGATTGAG--GAGAAA--GGGAGAAGGGTAGTCCC-----TTCAGGGCTTAGGGAACCAGGC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34982374 107 + 104879549 CCGAAGA-AGCCTGCAGGGGTGCTGCTCCTGGCCCTGAGGTTGAAGAGAGGCTTGAAGA-TGAG--GAGAAA--GGGAGAAGGGCAGTCCC-----TTCAGGGCTTAGGGAACCAGGC i nomLeu3.chr18 C 0 C 0 s chlSab2.chr9 72035814 107 - 125710982 CCGAAGA-AGCCTGCAAGGGTGCTGCTCCTGGCCCTGAGGCTGGAGAGAGGCTTGAAGA-TGAG--GAGAAA--GGGAGAGGGGTAGTCCC-----TTCAGGGCTTAGGGAACCAGGC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75497651 90 - 121768101 CTGAAGA-AGCCTGCAGGAGTCCTGCTCCTGGCC-----------------CTTGAAGA-TGAA--GAGAAA--GGGAGACGGGTAGTCCC-----TTCAGGACTTAGGGAAGGAGGC i calJac3.chr12 C 0 C 0 s mm10.chr14 24082163 83 + 124902244 CCAACCACAGACTG--GGGTTGCTGCTCCC---------------------CTTCCGAG-TCAG--GCAAAACTAGGAGCAGGACTATC---------AAGGGCTTAGGACATCCGAC i mm10.chr14 C 0 C 0 s canFam3.chr4 27653032 110 + 88276631 -CCCAGA-AGCCTTCAGGGGTGCTGCTCCCCTCCCTGAGGCTGGACAGA--CTT-AAGC-TGAGCAGAGAAA--GTGAAGCAGGCAGTCCAGTCCGTTCAAGGTTTAGGGAGTCGGGC i canFam3.chr4 C 0 C 0 e papAnu2.chr9 73203560 0 - 125196307 C e macFas5.chr9 75339496 0 - 133195287 C e rheMac3.chr9 73777241 0 - 130959383 C a score=1405747.000000 s hg38.chr10_KI270825v1_alt 2797 433 + 188315 CCTAACAGAAG--TCCAATAAATGCAGGTCTGTTTGAAGACCTGAAGCTGTCTTTCAGAAACTGGGTC-TGAAGAAGCCTCACAGC---TGTTGCCAGGCCTG-GGA-GAGCTGCCATCAGAGGCCGCTGCTGCGGAGAAAGTCCTTCTGCTCTGTCCTGAAGGGGAGAAGGCCATGTCACCATAGGTCTCCTGCT-GGGGGTGGGCCA-GGATTCTCAGCAAGGAGGTAGAAATG--ACCAGGGCAATGACAACATGGGGA------------TTCACATGGACCTATGTTAATG-TATCAAGA-ATAGTCGGACCAAAGCTTGTTAACACAGAA------TAAAACAGGGAAACCAAAAAGT-----AGTGGAGAGGGAATAGAGAAAT-ATAATTCCAAAGAAATTGCCTCCAAACACTGGAgtaactgtacacaaaatg-tagctctgagct---gggcagccaaaac-aga s panTro4.chr10 76373389 434 + 133524379 CCTAACAGAAG--TCCAATAAATGCAGGTCTGTTTGAAGACCTGAAGCTGTCTTTCAGAAACTGGGTC-TGAAGAAGCCTCACAGC---TGTTGCCAGGCCTG-GGA-GAGCTGCCATCAGAGGCCGCTGCTGCGGAGAAAGTCCTTCTGCTCTGTCCTGAAGGGGAGAAGGCCATGTCACCATAGGTCTCCTGCT-GGGGGTGGGCCA-GGATTCTCAGCAAGGAGGTAGAAATG--ACCAGGGCAATGACAACATGGGGA------------TTCACATGGACCTATGTTAGTA-TATCAAGATATAGTCGGACCAAAGCTTGTTAACACAGAA------TAAAACAGGGAAACCAAAAAGT-----AGTGGAGAGGGAATAGAGAAAT-ATAATTCCAAAGAAATTGCCTCCAAACACTGGAgtaactgtacacaaaatg-tagctctgagct---gggcacccaaaac-aga i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76041188 435 - 133410057 CCTAACAGAAG--TCCAATAAATGCAGGTCTGTTTGAAGACCTGAAGCTGTCTTTCAGAAACTGGGTC-TGAAGAAGCCTCACAGC---TGTTGCCAGGCCTG-GGA-GAGCTGCCATCAGAGGCCGCTGCTGGGGAGAAAGTCCTTCTGCTCTGTCCTGAAGGGGAGAAGGCCATGTCACCACAGGTCTCCTGCT-GGGGGTGGGCCA-GGATTCTCAGCAAGGAGGTAGAAATG--ACCAGGGCAATGACAACATGGGGA------------TTCACATGGACCTATGTTAATA-TATCAAGATATAGTCGGACCAAAGCTTGTTAACACAGAA------TAAAACAGGGAAACCAAAAAGT-----AGTGGAGACGGAATAGAGAAAT-ATAATTCCAGAGAAATTGCCTGCAAACACTGGAGTAACTGTAAACAaaatg-tagctctgagct---gggcagccaaaacaaga i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34982481 434 + 104879549 CCTAACAGAAG--TCCAATAAATGCAGGTCTGTTAGGAGACCTGAAGCTATCTTTCAGAAACTGGGTC-TGAAGAAGCCTCACAGC---TGTTGCCAGGCCTG-GGA-GAGCTGCCATCAGAGGCCACTGCTGGGGAGAAAGTCCTTCTGCTCTGTCCTGAAGGGGAGAAGGCCATGTCACCATAGGTCTCCTGCT-GGGGGTTGGCCA-GGATTCTCAGCAAGGGGGTAGAAATG--ACCAGGGCAATGACGAAATGGGGA------------TTCACACTGACCTATGTTAATA-TATCAAGATACAGTCGGACCAAAGCTTGTTAACACAGAA------TAAAATAGGGAAACCAAAAAGT-----AGTGGAGAGGGAATAGAGAAAT-ATAATTCCAAAGAAATTGCCTCCAAACACTGGAgtaactgtacacaaaatg-tagctctgagct---gggcagccaaaac-aga i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73777241 422 - 130959383 CCTAACAGAAG--TCCAGTAAATGCAGGTCTTTTTGAAGACCTGAAGCTGTCTTTCAGAAACTGGGTC-TGAAGAAGCCTCACAGC---TGTTGCCAGGCCTG-GGA-GAGCTGCCAACAGAGGCCGCTGCTAGGTAGAAAGTCCTT-------------GAGGAGAGAAAGCCATGTTACCATAGGTCTCCTGCTGGGGGGTGGGCCA-GGATTCTCAGCAAGCGGGTAGAAATG--ACCAGGGCAATGACGAAATGGGGA------------TTTGCACTGACCTGTGTAAATA-TATGAAGATATAGTCGGACCAAAGCTTGTTAACACAGAA------TAAAACAGGGAAACCGAAAAAT-----AGTGGAGAGGGAATAGAGAAAT-ACAATCCCAAAGAAATTGCCTCCAAACGCTGGAGTAACTGTACACAAAATG-TAGCTCTGAGCT---GGGCAGCCAAAAC-AGA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75339496 422 - 133195287 CCTAACAGAAG--TCCAGTAAATGCAGGTCTTTTTGAAGACCTGAAGCTGTCTTTCAGAAACTGGGTC-TGAAGAAGCCTCACAGC---TGTTGCCAGGCCTG-GGA-GAGCTGCCAACAGAGGCCGCTGCTAGGTAGAAAGTCCTT-------------GAGGAGAGAAAGCCATGTTACCATAGGTCTCCCGCTGGGGGGTGGGCCA-GGATTCTCAGCAAGCGGGTAGAAATG--ACCAGGGCAATGACGAAATGGGGA------------TTTGCACTGACCTGTGTAAATA-TATCAAGATATAGTCGGACCAAAGCTTGTTAACACAGAA------TAAAACAGGGAAACCGAAAAGT-----AGTGGAGAGGGAATAGAGAAAT-ACAATCCCAAAGAAATTGCCTCCAAACGCTGGAGTAACTGTACACAAAATG-TAGCTCTGAGCT---GGGCAGCCAAAAC-AGA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73203560 422 - 125196307 CCTAACAGAAG--TCCAGTAAATGCAGGTCTTTTTGAAGACCTGAAGCTGTCTTTCAGAAACTGGGTC-TGAAGAAGCCTCACAGC---TGTTGCCAGGCCTG-GGA-GAGCTGCCAACAGAGGCCGCTGCTAGGTGGAAAGTCCTT-------------GAGGAGAGAAAGCCATGTCACCATAGGTCTCCCGCTGGGGGGTGGGCCA-GGATTCTCAGCAAGCGCGTAGAAATG--ACCAGGGCAATGACGAAATGGGGA------------TTTGCACTGACCTGTGTAAATA-TATCAAGATATAGTCGGACCAAAGCTTGTTAACACAGAA------TAAAACCGGGAAACCGAAAAGT-----AGTGGAGAGGGAATAGAGAAAT-ACAATCCCAAAGAAATTGCCTCCAAATGCTGGAGTAACTGTACACAAAATG-TAGCTCTGAGCT---GGGCAGCCAAAAC-AGA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72035921 422 - 125710982 CCTAACAGAAG--TCCAGTAAATGCAGGTCTTTTTGAAGATCTGAAGCTGTCTTTCAGAAACTGGGTC-TGAAGAAGCCTCACAGC---TGTTTCCAGGCCTG-GGA-GAGCTGCCATCAGAGGCCGCTGCTAGGGAGAAAGTCCTT-------------GAGGAGAGAAGGCCATGTCACCATAGGTCTCCCGCTGGGGGGTGGGCCA-GGATTCTCAGCAAGCGGGTAGAAATG--ACCAGGGCAATGACGAAATGGGGA------------TTCGCACTGACCTGTGTAAATA-TATCAAGACATAGTCGGACCAAAGCTTGTTAGCACAGAA------TAAAACAGGGAAACCGAAAAGT-----AGTGGAGAGGGAATAGAGAAAT-ACAATCCCAAAGAAACTGCCTCCAAACACTGGAGTAACTGTACACAAAATG-TAGCTCTGAGCT---GGGCAGCCAAAAC-AGA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75497741 434 - 121768101 CCTAACAGAAG--TCCAATCAATGCAGGTCTTTTTGAAGACCTGAAGCTGTCTTTCAGAAACTGGTTC-TGAAGAGGACTCACAGC---TGTTTCCAGGCCTG-GGA-GAGCTGCCTTCAGAGGCTGCTGCTGGAGAGAAGGTCCTTCTGCTCTGTACTGGAGGGGAGAAGGCCATGTCACCATAGGTCTCCTGCC-AGGGTTGGGCCA-GGATTCTCAGCAAGAAGGTAGAAATG--ACCAGGGCAATGACGAAATGGGGA------------TTCACACTGACCTATGaaaata-tatcaagatacagtcggaccaaagctcattaacacagaa------taaaactgcgaaactaaaaagt-----agtggagagggaatagacaaat-ataatcccaaagaaattgcctccaaacgctggagtaactgtacacaaaatg-tagcactgagct---gggcagccgaagc-aga i calJac3.chr12 C 0 C 0 s mm10.chr14 24082246 345 + 124902244 ------TTTAG--TCCAATAAACACAGGATCCTTATGGGAC--------ATCTTTCAGA-----GTCC-ACAGGAGGCCTCTGGGCGAAGGCTGCTAAGCCTGAAAA-GAGCTG--GTTCACAGCCACAGTTGAGGACAG----CTT---------------GGAGGGAGTGCCGGTCCACAACAG---------T--------------GTGTTCTTGACATGGAGAT-----TC--AGCAGTGCTTGGATA----------------------------CGATCTATAAGAATAGTCTTAAGATACAGTGGAACCCAAGTTTGTTACAGAAAAT------CAGGACGGGGGAGC---AAAGTCCCGGAGTGGAAAGGGGGAAGGGAAAC-GCAGTT--GAGGCACTAGCTTCAGGAGGTGGGAGTTAC---------AGTG-CAGCTCAGGTCTC-CTGACAGCCAGA------ i mm10.chr14 C 0 C 0 s canFam3.chr4 27653142 450 + 88276631 CCTAACACAGGGTCCCATGAAACGCAGGAGCCT-------CTTGAAGCTGTCTTTCAGAAGCTGGGTCACAAGGAAGCCTCAGAGC---TGTTGCCAGAGCTG-GCAGGAGCCACCATCAGAAGCGACCACCGAGAAGAAAGTCCTTCTGCTCAGTCCTAAAGGGAAGGATGCTTTGCCACCATGGGTCCCCGCCT---GGGTGGGCCCTGGTTTCTCACAGAGGGAATAGATGTAGTGCCATGGGGAAGGGGAGATGGGGATTCAGCAGAGGCTTCAAACGAATCTATATAAATA---TTAAAATAGAACAAGACCAAAGCTTGTTAGCACAAAAAGGGAGTAGAGGGTGGGAGTC---AGGG-----AGTGGAGAGGGAGGAGAGGAATAATGGTCCCAAAGAATCAGCCTTAGAAGGTCAGAGTAACTTCgcacaaaatgttaactctgagcttgttggcagcaaaggc-aga i canFam3.chr4 C 0 C 0 a score=1883.000000 s hg38.chr10_KI270825v1_alt 3230 1 + 188315 g s panTro4.chr10 76373823 1 + 133524379 g i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76041623 1 - 133410057 g i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34982915 1 + 104879549 g i nomLeu3.chr18 C 0 C 0 s macFas5.chr9 75339918 1 - 133195287 A i macFas5.chr9 C 0 C 0 s calJac3.chr12 75498175 1 - 121768101 g i calJac3.chr12 C 0 C 0 s mm10.chr14 24082591 1 + 124902244 G i mm10.chr14 C 0 C 0 s canFam3.chr4 27653592 1 + 88276631 g i canFam3.chr4 C 0 C 0 e chlSab2.chr9 72036343 0 - 125710982 C e papAnu2.chr9 73203982 0 - 125196307 C e rheMac3.chr9 73777663 0 - 130959383 C a score=152478.000000 s hg38.chr10_KI270825v1_alt 3231 153 + 188315 aagggagcagatgagtgacattagactctctgactagtagaaggaagcattagta---tccatttctca-gaaaagaaattgctttcctgacTCCTGAGCAAAGGCAGCAAACCACAGTCCCTTCTCATACTTCTTAATGAAGAATTCCTGAACCAG s panTro4.chr10 76373824 153 + 133524379 aagggagcagatgagtgacattagactctctgactagtagaaggaagcattagta---tccatttctca-gaaaagaaattgctttcctgacTTCTGAGCAAAGGCAGCAAACCACAGTCCCTTCTCATACTTCTTAATGAAGAATCCCCAAACCAG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76041624 153 - 133410057 aagggagcagatgagtgacattagactccttgactagtagaaggaagcattagta---tccatttttca-gaaaagaaattgctttcctgacTTCTGAGCAAAGGCAGCAAACCACAGTCCCTTCTCATACTTCTTAATGAAGAATCCCTAAACCAG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34982916 153 + 104879549 aagggagcagatgagtgacattagactctttgactagtagaaggaagcattagtt---tccagttttca-gaaaaaaaatttctttcctgacTTCTGAGCAAAGGCAGCAAACCACAGTCCCTTCTCATACTTCATAATGAAGAATCCCTAAACCAG i nomLeu3.chr18 C 0 C 0 s calJac3.chr12 75498176 145 - 121768101 aaggaagcagaggagtgactttagactctttgaccagtagaaggaggcatgagga---tgagtttttta-gagaagaaattgctttcctgacttctaaGC-AAGGCAGAAAACCATAGGTGCTTCTCATATGCCTTTATG-------CCTAAACCAG i calJac3.chr12 C 0 C 0 s mm10.chr14 24082592 146 + 124902244 AGCGTGTCAGGTGAGCAGCACTGGACAATTTAATTGCTGGAATAAAGGCTCTGCACCGTTTATTTTTAAGGAAAAGAGACCACTCTCCTGAGTTCTGAGCAAAAT--ATGAACCACAG--CTTCCCTGTGCTTCTTCCCA-------CCTGACATAG i mm10.chr14 C 0 I 2 s canFam3.chr4 27653593 143 + 88276631 aagggagttcatgggtgatgtcagacctttgggctggtagaagga-gcgtcggta---ctgatttttcaggaagcgaaattgatttcctgacTCCTGAGG-AAGGCAGCAAGCCAGAG--CCTCCCCATATTTCCTTACA-------CTTGAGGTAG i canFam3.chr4 C 0 C 0 e chlSab2.chr9 72036343 0 - 125710982 C e papAnu2.chr9 73203982 0 - 125196307 C e macFas5.chr9 75339919 0 - 133195287 C e rheMac3.chr9 73777663 0 - 130959383 C a score=4500.000000 s hg38.chr10_KI270825v1_alt 3384 1 + 188315 G s panTro4.chr10 76373977 1 + 133524379 G i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76041777 1 - 133410057 G i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34983069 1 + 104879549 G i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73777663 1 - 130959383 G i rheMac3.chr9 C 0 C 0 s papAnu2.chr9 73203982 1 - 125196307 G i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72036343 1 - 125710982 G i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75498321 1 - 121768101 G i calJac3.chr12 C 0 C 0 s mm10.chr14 24082740 1 + 124902244 G i mm10.chr14 I 2 C 0 s canFam3.chr4 27653736 1 + 88276631 G i canFam3.chr4 C 0 C 0 e macFas5.chr9 75339919 0 - 133195287 C a score=729622.000000 s hg38.chr10_KI270825v1_alt 3385 239 + 188315 GATTCAGCATTCATAGCAAAGGGAAGTCTTACCCCAGAGGGAGGCTAGTGAGGGA---CACCAAATCAAAGAAGACAACAGTTTATTTAGGTTAGAAGGAAGAACAAGGCTG-----------------CAAAGCTAAT----GAAGCTTGGCTTCAGGATCGCACAG--------------TTACAGGTCCTTCCCTCACATTCTCTCCCCTTTCTCCGTCCA---CCAGGGCAAACT--AGAGATTT-AAGTTTTCGCTTTT------GTTGACTTTACAAACTCAA s panTro4.chr10 76373978 239 + 133524379 GATTCAGCATTCATAGCAAAGGGAAGTCTTACCCCAGAGGGAGGCTAGTGAGGGA---CACCAAATCAAAGAAGACAACAGTTTATTTAGGTTAGAAGGAAGAACAAGGCTG-----------------CAAAGCTAAT----GAAGCTTGGCTTCAGGATCGCACAG--------------TTGCAGGTCCTTCCCTCACATTCTCTCCCCTTTCTCCGTCCA---CCAGGGCAAACT--AGAGATTT-AAGTTTTCGCTTTT------GTTGACTTTACAAACTCAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76041778 239 - 133410057 GATTCAGCATTCATAGCAAAGGGAAGTCTTACCCCAGAGGGAGGCTAGTGAGGGA---CACCAAATCAAAGAAGACAACAGTTTATTTAGGTTAGAAGGAAGAACAAGGctg-----------------caaagctaat----gaagcttggcttcaggatcgcacag--------------ttgcaggtccttcccTCACATTCTCTCCCCTTTCTCCGTCCA---CCAGGGCAAACT--AGAGATTT-AAGTTTTCGCTTTT------GTTGACTTTACAAACTCAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34983070 239 + 104879549 GATTCAGCATTCATAGCAAAGGGAAGTCTTTCCCCAGAGGGAGGCTAGGGAGGGA---CACCAAATCGAAGAAGACAACAGTTTATTAAGGTTAGAAGGAAGAACAAGGCTG-----------------CAAAGCTAAT----GAAGCTTGGCTTCAGGATCGCACAG--------------TTGCAGGTTCTTCCCTCACATTCTCTCCCCTTTCTCTGTCCA---CCAGGGCAAACT--AGAGATTT-AAGTTTTTGCTTTT------GTTGACTTCACAAACTCAA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73777664 230 - 130959383 GATTCAGCATTTATAGCAAAGGGAAGTCTTACCCCAGAGGGAGGCTAGCGAGGGA---CACCAAATCAAAGAAGACAAGAGTCTATTTCGGTCAGAAGGAAGAACAAGACTG-----------------CAAAGTTAAT----GACGCTTGGCTTCAGGATCGCACAG--------------TTGCAGGTCCTTCCCTCACATTCCCTCCCCTTTCTCCATCCA---CCAGGGCAAACT------------GGTTTTCGCTTTT------GTTGACTTTACAAACTCAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75339919 230 - 133195287 GATTCAGCATTCGTAGCAAAGGGAAGTCTTACCCCAGAGGGAGGCTAGCGAGGGA---CACCAAATCAAAGAAGACAAGAGTCTATTTCGGTCAGAAGGAAGAACAAGACTG-----------------CAAAGTTAAT----GACGCTTGGCTTCAGGATCGCACAG--------------TTGCAGGTCCTTCCCTCACATTCCCTCCCCTTTCTCCATCCA---CCAGGGCAAACT------------GGTTTTCGCTTTT------GTTGACTTTACAAACTCAA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73203983 230 - 125196307 GATTCAGCATTCATAGCAAAGGGAAGTCTTACCCCAGAGGGAGGCTAGCGAGGGA---CACCAAATCAAAGAAGACAAGAGTCTATTTCGGTCAGAAGGAAGAACAAGACTG-----------------CAAAGTTAAT----GACGCTTGGCTTCAGGATCGCACAG--------------TTGCAGGTCCTCCCCTCACATTCCCTCCCCTTTCTCTATCCA---CCAGGGCAAACT------------GGTTTTCGCTTTT------GTTGACTTTACAAACTCAA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72036344 230 - 125710982 GATTCAGCATTCATAGCAAAGGGAAGTCTTACCCCAGAGGGAGGCTAGTGAGGGA---CACCAAATCAAACAAGACAAGAGTCTATTTCGGTCAGAAGGAAGAACAAGGCTG-----------------CAAAGCTAAT----GACGCTTGGCTTCAGGATCGCACAG--------------TTGCAGGTCCTTCCCTCACATTCTCTCCCCTTTCTCCATCCA---CCAGGGCAAAGT------------GGTTTTCACTTTT------GTTGACTTTACAAACTCAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75498322 212 - 121768101 GAGTCTGCATTCATAGCAAA-GGAAGTCTTACCCCAAAGGGAGGCTAGTGAGAGATACCACCAAATCAAAG--------AGTTTATGTAGGTCAAAAGGAAGAACAAGGCTG-----------------AAAAGTGAAT----GAAGCTTGGCTTCCGGATCA-----------------------------------CACATTCTCTCCCCTTTCTCTGTCCA---CGAGGGCAAACT--AGAGACTT-AAGTTTTTGCTTTT------GTTGGCTTTACAAATTCAG i calJac3.chr12 C 0 C 0 s mm10.chr14 24082741 236 + 124902244 CAGTCAGCATCCGTAGCAGAGGGAGCATTTGCTGCACAGTGACAGTGAGGTTGGG---TACCAACAGAAAACACAAAACAGTAAACTT-GACCAGAAGT-----CAAGGCCC-----------------TATTCCTAATACCAAACCTCTAGACTTGGGGACACCCA---------------------------CCACTAGAGTCACCTCCCTCTTTCTGCCCACCCCCAAGGCAAATTCTATATATTTAAAGCTTTTTTTTTTCTTTTGGTTGAATTTGTAAACTCAA i mm10.chr14 C 0 I 91 s canFam3.chr4 27653737 272 + 88276631 GATTCAGCATCCTCAGCAAAAGGAACTCTTAGTTCCAAGAGAGGATAGTGAGGGG---TTCCAAGCCAAGGAAATGAGGAAT-GGTTTAGCTCAAAAGGTAGGAGGAGGTTGACCTGAGGCTACTGCCTTGAAGCCAAT----AAAGCGTAACCTCAGCCCCCCCCCGCCCCCCCACCCCATTCGCAGGACCTCTCCGAAGGTTCACTCTGTTTTTTCTGCCCA--TCCAGGGCATGCTGTCCACATTT-GATTTTCTGCTTTT------ACTGATTTTACAAACTCAA i canFam3.chr4 C 0 I 5 a score=130395.000000 s hg38.chr10_KI270825v1_alt 3624 36 + 188315 TTCATGGGTACAGATGGGGATTTAAAAACAAAAACA s panTro4.chr10 76374217 36 + 133524379 TTCATGGGTACAGATGGGGATTTAAAAACAAAAACA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76042017 36 - 133410057 TTCATGGGTACAGATGGGGATTTAAAAACAAAAACA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34983309 36 + 104879549 TTCATGGGTACAGATGGGGATTTAAAAACAAAAACA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73777894 36 - 130959383 TTCATGGGTACAGACGGGGATTTAAAAACAAAAACA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75340149 36 - 133195287 TTCATGGGTACAGATGGAGATTTAAAAACAAAAACA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73204213 36 - 125196307 TTCATGGGTACAGATggggatttaaaaacaaaaaca i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72036574 35 - 125710982 TTCATGGGTACAGATGGGGATTTAAAAAC-AAAACA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75498534 36 - 121768101 CTCATGGGTACAGATGGGGATTTACAAACCAAAACA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27654014 36 + 88276631 TTCTTAGGCACAGACGGAAATTTAGAAGCAAAAGCA i canFam3.chr4 I 5 C 0 e mm10.chr14 24082977 91 + 124902244 I a score=861550.000000 s hg38.chr10_KI270825v1_alt 3660 310 + 188315 AGgacctggagcagtggttcatatgcctgtctgcactctgggagctgaggcaggaggatgactggaggccaggagttcgaaaccaggctggacaacatagtgaaatttcatctctacaaaatttaaaataataataataataataaccaggc-atggtggcacatggctgtagtcc---ctactcaggaggctgaggcaggaggagggtatgagttcgagcccaggaggttgacgttgcagtgtgctatgattgtgccactgcagtctagtctagggtgaca-------------TTGTT-TAAAA-----------CTGTTCAAACACACACAAAGTG s panTro4.chr10 76374253 323 + 133524379 AGgacctggagcagtggttcatacgcctgtctgcactctgggagctgaggcaggaggatgactggaggccaggagttcgaaaccaggctggacaacatagtgaaatttcatctctacaaaatttaaaataataataataataataaccaggc-atggtggcacatggctgtagtcc---ctactcaggaggctgaggcaggaggagggtttgagtttgagcctaggaggttgacgttgcagtgtgctatgattgtgccactgcagtctagtctagggtgacagagcaagactttgtTGTT-TAAAA-----------CTGTTCAAACACACACAAAGTG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76042053 321 - 133410057 AGgacctggagcagtggctcatatgcctgtctgcactctgggagctgaggcaggaggatgactggaggccaggagatcgaaaccaggctggacaacatagtgaaatttcatctctacaaaatttaa---aataataataataataaccaggc-atggtggcacatgcctgtagtcc---ctactcaggaggctgaggcagaaggagggtttgagtttgagccaaggaggttgacgttgcagtgtgctatgattgtgccactgcagtctagtctagggtgacagagcaagactttgttgttaaaaaa-----------aTGTTCAAACACACACAAAGTG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34983345 320 + 104879549 AGGACTTggagcagtggctcatatgcctgtctgcactctgggagctgaggcaggaggatgactggaggccaggagtttgaaaccaggctggacaacatagtgaaatttcatctctacaaaatttaa---aataataataataataaccaggc-atggtggcacatgcctgtagtcc---ctactcaggaggctgaggcagcaggaggttttgagtttgagcccaggaggttgatgttgcagtgtgctatgattgtgccactgcagtctagtctagggtgacagagcaagactttgttgtt-aaaaa-----------aTGTTCAAACACACACAAAGTG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73777930 311 - 130959383 AGgacctggagcagtggctcatatgcctatcagtattttgggagctgaggcaggaggatgactggaggccaggagtttgagaccagcctgggcaacatagtaaaatttcatctctacaaaaatgta------aaaaataataataaccaggc-gtggtggcacatgcctgtagtcc---ctactcaggaggctgaggcaggaggagg------gtttgagccaaagaggttgatgttgcagtgtgctatgattgtgccactgcagtctagtctagggtgacagagcaagactttgttgtt-aaaga-----------aTGTTCAAACACACACAAAGTG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75340185 311 - 133195287 AGgacctggagcagtggctcatatgcctatcagtactttgggagctgaggcaggaggatgactggaggccaggagttcgagaccagcctgggcaacatagtaaaatttcatctctacaaaaatgta------aaaaataataataaccaggc-gtggtggcacatgcctgtagtcc---ctactcaggaggctgaggcaggaggagg------gtttgagccaaagaggttgatgttgcagtgtgctatgattgtgccactgcagtctagtctagggtgacagagcaagactttgtTGTT-AAAGA-----------ATGTTCAAACACACACAAAGTG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73204249 311 - 125196307 aggacctggagcagtggctcatatgcctatcagtactttgggagctgaggcaggaggatgactggaggccaggagttcgagaccagcctgggcaacatagtaaaatttcatctctacaaaaatgta------aaaaataataataaccaggc-gtggtggcacatacctgtagtcc---ctactcaggaggctgaggcaggaggagg------gttTGAGCCAaagaggttgatgctgcagtgtgctatgattgtgccactgcagtctagtctagggtgacagagcaagactttgttgtT-AAAGA-----------Atgttcaaacacacacaaagtg i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72036609 311 - 125710982 AGgacctggagcagtggctcatatgcctatcagtactttgggagctgaggcaggaggatgactggaggccaggagttcgagaccagcctgggcaacatagtaaaatttcatctctacaaaaatttt------aaaaataataataaccaggc-gtggtggcacatgcttgtagtcc---ctactcaggaggctgaggcaggaggagg------gtttgagccaaagaggttgatgttgcagtgtgctatgattgtgccactgcagtctagtctagggtgacagagcaagactttgtTGTT-TAAGA-----------ATGTTCAAACACACACAAAGTG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75498570 310 - 121768101 AGGACCTGTAgcagtggctcataagcctctcagcactttaggagcagaggcaggagaatgaattggagccaggagttgaagaccagcc-gggcaacataatgaaatctcatctctacaaaaagttt------aaaa--aataataaccaggcaatggtggcacatgcctatagtcccagctcctcaggaggctgaggccggaggagc------gtttgatcccaggaggttgatgttgcagtgtgctatgattgtactactgtagtctaatccagggtgacT-------------TTGTT-acacacacacacacacacacacacacacacacacaGCG i calJac3.chr12 C 0 C 0 e canFam3.chr4 27654050 0 + 88276631 C e mm10.chr14 24082977 91 + 124902244 I a score=1088488.000000 s hg38.chr10_KI270825v1_alt 3970 327 + 188315 AAAATTGTAAGTGCTCTTCTAAAAGCATTGCATGTTGGAAAATTAGACTAGGAGGCACTTTGACATCTTTTTAGACCACAGATTTCTGGGGAAGCCAGAAAGGAGCTG-----GGGTGGCAAAACTAGGAGCACAAGGAATGCCTCATTAGCTGTGCTGGGGGGCC--------AAGGGTGTGGAGAATAAGCCAGGC-------------------ACCAGGAAAAGGC----------------------------------------AGCTGCCATTCTCTC------GCATACCCGGCACACCTTGCTGGGATGTTGGTATACCATGGGTAAAATGCCAAACCTAGCGCCATCTCTTCTTTAACCCCCTACAGTACTTTGTTTGTACTTTTCTTAGGGTAC s panTro4.chr10 76374576 327 + 133524379 AAAGTTGTAAGTGCTCTTCTAAAAGCATTGCATGTTGGAAAATTAGACTAGGAGGCACTTTGACATCTTTTTAGACCACAGATTTCTGGGGAAGCCAGAAAGGAGCTG-----GGGTGGCAAAACTAGGAGCACAAGGAATGCCTCATTAGCTGTGCTGGGGGGCC--------AAGGGTGTGGAGAATAAGCCAGGC-------------------ACCAGGAAAAGGC----------------------------------------TGCTGCCATTCTCTC------GCATACCCAGCACACCTTGCTGGGATGTTGGTATACCATGGGTAAAATGCCAAACCTAGCGTCATCTCTTCTTTAACCCCCTACAGTACTTTGTTTGTACTTTTCTTAGGGTAC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76042374 327 - 133410057 AAAGCTGTAAGTGCTCTTCTAAAAGCATTGCATGTTGGAAAATTAGACTAGGAGGCACTTTGACATCTTTTTAGACCACAGATTTCTGGGGAAGCCAGAAAGGAGCTG-----GGGTGGCAAAACTAGGAGCACAAGGAATGCCTCATTAGCTAGGCTGGGGGGCC--------AAGGGTGTGGAGAATAAGCCAGGC-------------------ACCAGGAAAAGGC----------------------------------------AGCTGCCGTTCTCTC------GCATACCCGGCACACCTTGCTGGGATGTTGGGATACCATGGGTAAAATGCCAAACCTAGCATCATCTCTTCTTTAACCCCCTACGGTACTTTGTTTGTACTTTTCTTAGGGTAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34983665 327 + 104879549 AAAGTTGTAAGTGTTCTTCTAAAAGCATTGCATGTTGGAAAATTAGACTAGGAGGCACTTTGTCATCTTTTTAGACCACAGATTTCTGGGGAAGCCAGAAAGGAGCTG-----GGGTGGCAAAACTAGGAGCACAAGGAATGCCTCATTAGCTGTGCTGGGGGGCC--------AAGGGTGTGGAGAATAAGCCAGGC-------------------ACCAGGAAAAGGC----------------------------------------AGCTGCAGTTCTCTT------GCATGCACGGCATACCTTGCTGGGATGTTGGGATACCATGGGTAAAATGCCAAACCTAGTGTCATCTCTTCTTCAACCCCCTACAATACTTTGTTTGTACTTTTCCTAGGGTAG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73778241 327 - 130959383 AAAGCTGTAAGTGCTCTTCTAAAAGCATTGCATGTTGGAAAATTAGACGAGGAGGCACTTTGACACCTTTTTAGACCACAGATTTCTGGGGAAGCCAGAAAGGAGCTG-----GGGTGGCAAAACTAGGAGCACAAGGAATGCCTCATTAGCTGCGCTGGGGGGCC--------AAGGGTATGGAGAATAAGCCAGGC-------------------ACCAGGAAAAGAC----------------------------------------AGCTGCCGTTCTCTC------GCATACCCGGCACACCTTGCTGGGATGTTGGGATACCATGGGTAAAATGCCAAACCTAGCATCATCTCTTCTTTAACCCCCTACAGTACTTTGTTTGTACTTTTCTTAGGGTAC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75340496 327 - 133195287 AAAGCTGTAAGTGCTCTTCTAAAAGCATTGCATGTTGGAAAATTAGACGAGGAGGCACTTTGACACCTTTTTAGACCACAGATTTCTGGGGAAGCCAGAAAGGAGCTG-----GGGTGGCAAAACTAGGAGCACAAGGAATGCCTCATTAGCTGCGCTGGGGGGCC--------AAGGGTATGGAGAATAAGCCAGGC-------------------ACCAGGAAAAGAC----------------------------------------AGCTGCCGTTCTCTC------GCATACCCGGCACACCTTGCTGGGATGTTGGGATACCATGGGTAAAATGCCAAACCTAGCATCATCTCTTCTTTAACCCCCTACAGTACTTTGTTTGTACTTTTCTTAGGGTAC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73204560 327 - 125196307 aAAGCTGTAAGTGCTCTTCTAAAAGCATTGCATGTTGGAAAATTAGACGAGGAGGCACTTTGACACCTTTTTAGACCACAGATTTCTGGGGAAGCCAGAAAGGAGCTG-----GGGTGGCAAAACTAGGAGCACAAGGAATGCCTCATGAGCTGCGCTGGGGGGCC--------AAGGGTGTGGAGAATAAGCCAGGC-------------------ACCAGGAAAAGAC----------------------------------------AGCTGCCGTTCTCTC------GCATACCCGGCACACCTTGCTGGGATGTTGGGATACCATGGGCAAAATGCCAAACCTAGCATCATCTCTTCTTTAACCCCCTACAGTACTTTGTTTGTACTTTTCTTAGGGTAC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72036920 327 - 125710982 AAAGCTGTAAGTGCTCTTCTAAAAGCATTGCATGTTGGAAAATTAGACGAGGAGGCACTTTGACACCTTTTTAGACCACAGATTTCTGGGGAAGCCAGAAAGGAGCTG-----GGGTGGCAAAACTAGGAGCACAAGGAATGCCTCATTAGCTGCGCTGGGGGGCC--------AAGGGTGTGGAGAATAAGCCAGGC-------------------ACCAGGAAAAGAC----------------------------------------AGCTGCCGTTCTCTC------GCATACCCGGCACACCTTGCTGGGATGTTGGGATACCATGGGTAAAATGCCAAACCTAGCATCATCTCTTCTTTAACCCCCTACAGTACTTTGTTTGTACTTTTCTTAGGGTAC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75498880 363 - 121768101 AAAGCTGTAAGTGCTCTTCTAAAAGCACTGCATGTTGGAAAATTAGACTAGGAGGCACTTTGACAACTTTTTAGACCACAGATTTCTGGGGAAGCCA-AAAAGAGCTG-----GGGTGGCAAAACTCGGAGCACAAGGAATGCCTCAC-AGCTGTGCTGGGGGACC--------AAGGGTGTGGAGAATAAGCCAGGG-------------------ACCAGGAAAAGGCTCAGCCTCCCATCCCCTA-TTACTGTCAGTCTTGAGGTGTGGCTGCCATTCTCTT------GCATACCCAGTACTCCTTGCTGGGATGCTGGGATCCCAGGGGT-AAATGCCAAACCTAGCTTCATCCCTTCCTTAACCCCCCACAGTACTTTGTTTGCATTTTTCTTAGGGTAC i calJac3.chr12 C 0 C 0 s canFam3.chr4 27654050 365 + 88276631 AAAGCAGTGAGCGCTGTCCTAAAAGCACTGCATGTTGGGAAGTTAGCCCTGGAAGCACCTGGAC--CCCTTCAGACCATGCATTGCTGGGGAAGCCAGGAAGGAGCTGGCTATGGCTAGCAGGATAAGCAGCACAAGAAATGCCTCCTCAGT--AGCTGGAGGGGCGTGGGAGGATGGGCGTGGGGGGTTGTTCAAGGGTAGAGGGTGGTGGGTCAAGCCAGGACAAAGC-----TTAGCCTCTCCTACTTCTTGACAATCTTGAGGAG-AACTGCTGTTCCCTCTGCTCAGCACATCCAGGATGACCCGCTGGGATGTGGGGATGGTA-GGGT-AAGTGCCCAGTACAGGA------------GAACCC----------------TGTACTCCTATTAGGGCAC i canFam3.chr4 C 0 C 0 e mm10.chr14 24082977 91 + 124902244 I a score=294311.000000 s hg38.chr10_KI270825v1_alt 4297 88 + 188315 TCATGTTGCCCGCCTCCCTTT--ATAGATGCTCATATTTAATCCTTCCAAAAACATGTGCCCTGATGCCAAGGGCAAGATCTTCCCCGCC s panTro4.chr10 76374903 88 + 133524379 TCATGTTGCCCGCCTCCCTTT--ATAGATGCTCATATTTAATCCTTCCAAAAACATGTGCCCTGATGCCAAGGGCAAGATCTTCCCCGCC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76042701 88 - 133410057 TGATGTTGCCCGCCTCCCTTT--ATACATGCTCACATTTAATCCTTCCAAAAACATGAGCCCTGATGCCAAGGGCAAGATATTCCCCGCC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34983992 84 + 104879549 ----GTTGCCCTCCTCCCTTT--ATAGATGCTCATATTTAATCCTTCCAAAAACATGTGCCCTGATGCCAAGGGCAAGATCTTCCCCACC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73778568 88 - 130959383 TCATGTTGCCTGTCTCCCTTT--ATAAATGCTTGCATTTAATCCTTCCAAAAACATGTGCCCTGATACCAAGGGCAAGATCTTCCCCGCC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75340823 88 - 133195287 TCATGTTGCCTATCTCCCTTT--ATAAATGCTTGCATTTAATCCTTCCAAAAACATGTGCCCTGATACCAAGGGCAAGATCTTCCCCGCC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73204887 88 - 125196307 TCATGTTGCCTGTCTCCCTTT--ATAAATGCTTGCATTTAATCCTTCCAAAAACATGTGCCCTGATACCAAGGGCAAGATCTTCCCCGCC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72037247 88 - 125710982 TCATGTTGCCTGTCTCCCTTT--ATAAATGCTTGCATTTAATCCTTCCAAAAACATGTGCCCTGATGCCAAGGGCAAGATCTTCCCCGCC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75499243 67 - 121768101 TC--GTTGCCCACCTCCC------------------TTTAATCCTTCCAAAAACATGTGCCCCAATGCCAAGGGC---ATCTTCCCTGCT i calJac3.chr12 C 0 C 0 s mm10.chr14 24083068 87 + 124902244 TTAAGTTGCTGGTCTCCTTTC--ACAATTATTGGTACCTAACACTCCCAAAAA-GTGTGTCTTGATATCAAGGGTCAAGCCCTCCCTGCT i mm10.chr14 I 91 C 0 s canFam3.chr4 27654415 85 + 88276631 -----TTAACTGCCTCCTTTTTCATAGCCCTTTGGACTTGATCCTCCCAGCAATATGTACCTTGATGCCAAGGACAAAAGCTTCCTTGCC i canFam3.chr4 C 0 I 61 a score=73044.000000 s hg38.chr10_KI270825v1_alt 4385 18 + 188315 TCTGCATCCAGGAGCTCT s panTro4.chr10 76374991 18 + 133524379 TCTGCATCCAGGAGCTCT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76042789 18 - 133410057 TCTGCATCCAGGAGCTCT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34984076 18 + 104879549 TCTGCATCCAGGAGCTCT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73778656 18 - 130959383 TCTGCATCCAGGAGCTCT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75340911 18 - 133195287 TCTGCATCCAGGAGCTCT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73204975 18 - 125196307 TCTGCATCCAGGAGCTCT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72037335 18 - 125710982 TCTGCATCCAGGAGTTCT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75499310 18 - 121768101 TCTGCATCCAGGAGCTCT i calJac3.chr12 C 0 C 0 s mm10.chr14 24083155 18 + 124902244 TCTGCATTCAAAAGCTCT i mm10.chr14 C 0 C 0 e canFam3.chr4 27654500 61 + 88276631 I a score=905175.000000 s hg38.chr10_KI270825v1_alt 4403 321 + 188315 GAAGTCTACACGAATGGAAATATA-------------------------------------------------------TATTCAAAATACGTATTCAACATACCATTGGGGATTTGATCCAAATGGAAATCAAAGAAATAGGAGACTCAGTGTGAGCTCTGAGTATGTTTCCAGGCTTACTG-AATAAGACACT-ATAAGTAGCTCTAACCCTGCAGATCAGTTAAACTGCAGCTGAGAGCTGCAGATGATCAGAAT----ggtgggtgcaag-tttatgtggggtcgaagttcataatattgaaagaacttctttagaaaaaaaa----------------------------------------------------aatat-atatatatagt-tacaaatatataataaggtcca----agcctt----------gggggtgtgagg s panTro4.chr10 76375009 321 + 133524379 GAAGTCTACACAAATGGAAATATA-------------------------------------------------------TATTCAAAATACGTATTCAACATACCATTGGGGATTTGATCCAAATGGAAATCAAAGAAATAGGAGACTCAGTGTGAGCTCTGAGTATGTTTCCAGGCTTACTG-AATAAGACACT-GTAAGTAGCTCTAACCCTGCAGATCAGTTAAACTGCAGCTGAGAGCTGCAGATGATCAGAAT----ggtgggtgcaag-tttatgtggggtcgaagttcataatattgaaagaacttctttagaaaaaaaa----------------------------------------------------aatat-atatatatagt-tacaaatatataataaggtcca----agtctt----------gggggtgtgagg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76042807 316 - 133410057 GAAGTCTACACGAATGGAAATATA-------------------------------------------------------TATTCAAAATACGTATTCAACATACCATTGGGGATTTGATCCAAATGGAAATCAAAGAAAGAGGAGACTCAGTGTGAGCTCTGAGCATGTTTCCAGGCTTACTG-AATAAGACACT-ATAAGTAGCTCTAACCCTGCAGATCAGTTAAACTGCAGCTGACAGCTGCAGATGATCAGaag----ggtgggtgcaag-tttatgtgggattgaagttcataatattgaaagaacttctttagaaaaaaaa----------------------------------------------------------atatatatagt-tagaaatatataataaggtcca----aggctt----------gggggtgtgagg i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34984094 325 + 104879549 GAAGTCTACATGAATGGAAATATA-------------------------------------------------------TATTCAAAATACGCATTCAACATACTATTGGGGATTTGATCCAAATGGAAATCAGAGAAATAGGAGACTCAGTGTGAGCTCCGAGCATGTTTCCAGGCTTACTG-AATAAGACACT-ATAAGTAGCTCTAACCCTGCAGATCAGTTAAACTGCAGCTGAGAGCTGCAAATGATCAGaag----ggtgggtgcaag-tttacgtggggttgaagttcataatattgaaagaacttctttagaaaaaaaa--taca----------------------------------------------tatat-atatatatagt-tacaaatatataataaggtcca----aggctt----------gggggtgtgagg i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73778674 381 - 130959383 GAAGTCTACACGAATGGAAATATA-------------------------------------------------------TATTCAAAATACGTATTTAACATACCCTTGGGGATTTGATCCAAATGGAAATCAAATAAATAGGAGACTCAGTGTGAGCTCTGAGCATGTTTTCAGGCTTACTC-AATAAGACACT-GCAAATAGCTCTAACCCTGCAGATCAGTTAAACTGCAGCTGAGAGTTGCAGATGATCAGAAG----GGTGGGTACAAG-TTTATGTGGGGTTGAAGTTTATAATAGTGAAAGAACTTA-TTAAAAAAAAAAACTCTATACTTGAAGTTTATAATAGTGAAAGAACTTAAAAAAAAACTCTCTCTATAT-ATatatatagt-tacaaatataaaataaggtcca----aggcttgggcggggc-gggggtgtgagg i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75340929 336 - 133195287 GAAGTCTACACGAATGGAAATATA-------------------------------------------------------TATTCAAAATACGTATTTAACATACCCTTGGGGATTTGATCCAAATGGAAATCAAATAAATAGGAGACTCAGTGTGAGCTCTGAGCATGTTTTCAGGCTTACTC-AATAAGACACT-GCAAATAGCTCTAACCCTGCAGATCAGTTAAAGTGCAGCTGAGAGTTGCAGATGATCAGaag----ggtgggtacaag-tttatgtggggttgaagtttataatagtgaaagaacttatttaaaaaaaaaaactata----------------------------------------------tatat-atatatatagt-tacaaatataaaataaggtcca----aggcttgggcgggac-aggggtgtgagg i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73204993 347 - 125196307 GAAGTCTACATGAAtggaaatata-------------------------------------------------------tattcaaaatacgTATTTAACATACCCTTGGGGATTTGATCCAAATGGAAATCAAATAAATAGGAGACTCAGTGTGAGCTCTGAGCATGTTTTCAGGCTTACTC-AATAAGACACT-GCAAATAGCTCTAACCCTGCAGATCAGTTAAACTGCAGCTGAGAGTTGCAGATGATCAGAAG----GGTGGGTACAAG-TTTATGTGGGGTTGAAGTTTATAATAgtgaaataacttattttaaaaaaaaacatatatatatatatata----------------------------------tatat-atatatatagt-tacaaatataaaataaggtCCA----AGGCTTggggggggT--GGGGTGTGAGG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72037353 355 - 125710982 GAAGTCTACACGAATGGAAATATA-------------------------------------------------------TATTCAAAATACATATTTAACATACCCTTGGGGATTTGATCCAAATGGAAATCAAATAAATAGGAGACTCAGTGTGAGCTCTGAGCATGTTTTCAGGCTTACTC-AATAAGACACT-GCAAATAGCTCTAACCCTGCAGATCAGTTAAACTGCAGCTGAGAGTTGCAGATGATCAGaag----ggtgggtacaag-tttacgtggggttgaagtttataacagtgaaagaacttttttttttaaaaaaactatatatatatatatatatata----------------------------tatat-atatatatagt-tacaaatataaaataaggtcca----aggcttgggtggggggggaggtgtgagg i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75499328 317 - 121768101 TAAGTCTATACAAATTGAAATACA-------------------------------------------------------CATTC-------------AACATACCCTTGGGGATTTGATCCAAATGAAAAGCGAAGAAATAAGCAGCTCAGTGTGAGCTCTGAGCATGTGTCCAGGCTTACTGTAGTGagacact-gtaagtagatct-accctgtggatcagttaaactgcagctgaaagccgcaGGTGATCAGAAG----GGTGGGCACCAG-TTTACGTGGGGTTGAAGTTCATAATATTGAAAGAACCttttt---aaaatatatcatatatata----------------------------------------tatat-ttatatGTAAT-TACAAATGTAAGATAAGGTCCA----AGGCTT----------GGAGGTGGGAGG i calJac3.chr12 C 0 C 0 s mm10.chr14 24083173 257 + 124902244 TAAATCT------------------------------------------------------------------------TGCACAAGATACACACTCAATGTGCCATTGGGAATTTGATCACAGTG---ATCAGAGACGT-------TAAAAGTGA----------------TAGGCCTCCTG-AGCAATGTTC-----AGGAGCTACTATGATGTGGGGTGG----------------------------------G----GGCGGGCACAAG-TTTTTGTGGAATTG----CTAGTATACTGGAAGATCTTCTGGAGAAGGTAGAGTAGAATAGAAGCCT-------------------------------------AAGATGATATACatattatataaataaaaaataaGGTCCAGCCTGGACTT----------GGGAGTGTGGGG i mm10.chr14 C 0 C 0 s canFam3.chr4 27654561 377 + 88276631 aaaaaataaataaataaaaataaattaaaaaaaaagaaaaGCTTCCTTGCCTCTGCTCTGCCCAGGAACTCATCAGGTTTGTACAAAATACACG-GCAATAGGCTTTTGGGGATCTGATCCAAATGGGAAGTAAAGAAAATAGGAGCCAAGAGTGAACTCTGAGTGCCTTTCCAGTCCTATTA---TAAGAAAATAGTAAGCACAGTCAGTCCCCAGGGTCAGCGAAGCAGCACTTGAGAGTTATCAATGGTCAGGAGCAGAGATGGGTGTGGGTTTTAAGTGGGCTGGAAATTTCCAAAAATGGAAGATCCTT------AAGAGAGCTAATGCGGGT-----------------------------------------TACaa-atataaaatat-tttatatatataaaa-----------GAGCTT----------GGGAGCAAGGGG i canFam3.chr4 I 61 I 15 a score=94388.000000 s hg38.chr10_KI270825v1_alt 4724 29 + 188315 ----ccctga-agttgaaacttcaagaacttcaa s panTro4.chr10 76375330 29 + 133524379 ----ccctga-agttgaaacttcaagaacttcaa i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76043123 29 - 133410057 ----ccctga-agttgaaacttcaagaacttcaa i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34984419 29 + 104879549 ----ccctga-agttgaaacttcaagaacttcaa i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73779055 29 - 130959383 ----ccctga-agttgaaacttcaagaacttcaa i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75341265 29 - 133195287 ----ccctga-agttgaaacttcaagaacttcaa i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73205340 29 - 125196307 ----CCCTGA-AGTTGAAACTTCAAGAACTTCAA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72037708 29 - 125710982 ----ccctga-agttgaaacttcaagaacttcaa i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75499645 29 - 121768101 ----CTCTGA-AGTTGAAATTTCAAGAACTTCAA i calJac3.chr12 C 0 C 0 s mm10.chr14 24083430 32 + 124902244 CATTCCCTGGCAGCTGATA--GCAATAATGGTCA i mm10.chr14 C 0 C 0 e canFam3.chr4 27654938 15 + 88276631 I a score=365411.000000 s hg38.chr10_KI270825v1_alt 4753 102 + 188315 gggtaaatAGCCTGTGGTCTTTGCAAGTGGCTGGCGAAGGTGTCAAAGA--------GATGGGACTCACCCTTGACTGAGCCTGGAAGACTGGGCAGAATTTGGAAAGAC s panTro4.chr10 76375359 102 + 133524379 gggtaaatAGCCTGTGGTCTTTGCAAGTGGCTGGCGAAGGTGTCAAAGA--------GATGGGACTCACCCTTGACTGAGCCTGGAAGACTGGGCAGAATTTGGAAAGAC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76043152 100 - 133410057 ggGT--ATTGCCTGTGGTCTTTGCAAGTGGCTGGTGAAGGTATCAAAGA--------GATGGGACTCACCCTTGACTGAGCCTTGAAGACTGGGCAGAATGTGGAAAGAC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34984448 102 + 104879549 gggtaaatAGCCTGTGGTCTTTGCAAGTGGCTGGCGAAGGCGTCAAAGA--------GATGGGACTCACCCTTGACTGAGCCTTGAAGACTGGGCAGAATTTGGAAAGAC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73779084 102 - 130959383 ggataaatAGGTTGTGGTCTTTGTAAGTGGCTGGTGAAGGTGTCAAAGA--------GAAGGAACTCGCCCTTGACTGAGCCTTGAAGACTGGGCAGAATTTGGAAAGAC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75341294 102 - 133195287 ggataaatAGGTTGTGGTCTTTGTAAGTGGCTGGTGAAGGTGTCAAAGA--------GAAGGAACTCGCCCTTGACTGAGCCTTGAAGACTGGGCAGAATTTGGAAAGAC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73205369 102 - 125196307 GGATAAATAGGTTGTGGTCTTTGTAAGTGGCTGGTGAAGGTGTCAAAGA--------GAAGGAACTCGCCCTTGACTGAGCCTTGAAGACTGGGCAGAATTTGGAAAGAC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72037737 102 - 125710982 ggataaatAGGTTGTGGTCTTTGTAAGTGGCTGGTGAAGGTGTCAAAGA--------GAAGGGACTCGCCCTTGACTGAGCCTTGAAGACTGGGCAGAATTTGGAAAGAC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75499674 102 - 121768101 GGGTAAATAGCCTGTGGTCTTTGCAAGTGGCTGGCAAAGGGGTCAAAGA--------GATAGGACTCACCTTTGACTGAGCCTTGAAGAATGGGCAGAATTTGGAAGGAC i calJac3.chr12 C 0 C 0 s mm10.chr14 24083462 95 + 124902244 GTGAAAAAATAAACTGGTCTTAGCAGGTGATCAGTATGGATGTCAAAGA------------AGACT--GTCTCGACCAATGCTAGAAGACTCAG-AGGATTTGGAAAGAC i mm10.chr14 C 0 C 0 s canFam3.chr4 27654953 108 + 88276631 GGGTAAATAGCCTGTGGCCTT-GAAAGTGGCTGGTGAAGGTGTAAATGAGATGGGAAGATGGGACTTGAGTCTGG-TGAACCTCGAAGGATGGGCACGTTTTGGAAAGAC i canFam3.chr4 I 15 I 64 a score=357381.000000 s hg38.chr10_KI270825v1_alt 4855 108 + 188315 AAAATAAAAAGGGCCG-TGTGGCAGGATGAACAAAGACATTTAATATTGCCAGAGGCCTGCTTGGGGAGCCCGTGAGCAAACCAGTCCAATTGGACAGAAACGTTGCAA s panTro4.chr10 76375461 108 + 133524379 AAAATAAAAAGGGCCG-TGTGGCAGGATGAACAAAGACATTTAATATTGCCAGAGGCCTTCTTGGGGAGCCCGTGAGCAAACCAGTCCAATTGGACAGAAACGTTGCAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76043252 108 - 133410057 CAAATAAAAAGGGCCG-TGTGGCAGGATGAACAAAGACATTTAATATTGCCAGAGGCCTCCTTGGGGAGCCCGTGAGCAAACCAGTCCAATTGGACAGAAACGTTGCAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34984550 108 + 104879549 CAAATAAAAAGGGCCG-TGTGGCAAGATGAACAAAGACATTTAATATTGCCAGAGGCCTGCTTGGGGAGCCCGTGAGCAAATCAGTCCAACTGGACAGAAACATTGGAA i nomLeu3.chr18 C 0 I 119 s rheMac3.chr9 73779186 108 - 130959383 CAAATAAAAAGGGCCA-TGTGGCAGGATGAACAAGGACATTTAATATTGCCAGAGGCCTGCTTGGGGAGCCCGTGAGCAAACCAGTCCAACTGGACAGAAACGTTGCAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75341396 108 - 133195287 CAAATAAAAAGGGCCA-TGTGGCAGGATGAACAAGGACATTTAATATTGCCAGAGGCCTGCTTGGGGAGCCCGTGAGCAAACCAGTCCAACTGGACAGAAACGTTGCAA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73205471 108 - 125196307 CAAATAAAAAGGGCCG-TGTGGCAGGATGAACAAGGACATTTAATATTGCCAGAGTCCTGCTTGGGGAGCCCGTGAGCAAACCAGTCCAACCGGACAGAAACGTTGCAA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72037839 108 - 125710982 CAAATAAAAAGGGCTG-TGTGGCAGGATGAACAAGGACATTTAATATTGCCAGAGGCCTGCTTGGGGAGCCCGTGAGCAAACCAGTCCAACTGGACAGAAACGTTGCAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75499776 108 - 121768101 CAAATAAACAGGGCCA-GGAGGCAGGATGAACAAAGACATTTAATACTGCCAGAGGCCTGCTTGGAGAGCCTGTGAGCAACCCAGTCCAGTTGGACAGAAACGTTGCAA i calJac3.chr12 C 0 C 0 s mm10.chr14 24083557 105 + 124902244 CAAATAAAAAGGGCAATTGTAGCAGAAAAAGTACAGGGCTTAAGGAGCAATGGACACTCACAGAGGGAGACAGTAGGCAAAGCAG----ACCGGGTGGAAATGTCACAA i mm10.chr14 C 0 C 0 e canFam3.chr4 27655061 64 + 88276631 I a score=428211.000000 s hg38.chr10_KI270825v1_alt 4963 180 + 188315 AGTCCAGGTGGAAAGAGGAAGGCTGGAAAGTCAGCTGAAGTCAGTTG-GGGGTGGTGGGGGTGGGCCTTGAGTGTAGGCTGACA--TCTGAATTCTATTTCACTAGTTATAGGAGCCATGGATGTTTATTTTTTAAATGCAGTTCATTGACTTGAAGAAAACAATGTCTTAGGAAGATTAGCC s panTro4.chr10 76375569 180 + 133524379 AGTCCAGGTGGAAAGAGGAAGGCTGGAAAGTCAGCTGAAGTCAGTTG-GGGGTGGTGGGGGTGGGCCTTGAGTGTAGGCTGACA--TCTGAATTATATTTCACTAGTTATAGGAGCCATGGATGTTTATTTTTTAAATGCAGTTCATTGACTTGAAGAAAACAATGTCTTAGGAAGATTAGCC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76043360 180 - 133410057 AGTCCAGGTGGAAAGAGGAAGGCTGGAAAGTCAGCTAAAGTCAGTTG-AGGGTGGTGGGGGTGGGCCTTGAGTGTAGGCTGACA--TCTGAATTATATTTCACTAGTTATAGGAGCCATGGATGTTTATTTTTTAAATGCAATTCATTGACTTGAAGAAAACAATGTTTTAGGAAGATTAGCC i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73779294 181 - 130959383 AGTCCAGGTGGAAAGAGGAAGGCTGGAAAGTCAGCTGAAGTCAGTTGTGGGGTGGTGGCGGTGGGCCTTGAGTGTAGGCTGACA--TCTGAGTTATATTTCACTAGTTATAGGAGCCATGGATGTTTATTTTTTAGATGCAGTTCATTTACTTGAAGAAAACAATGTTTTGGGAAGATTAGCC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75341504 181 - 133195287 AGTCCAGGTGGAAAGAGGAAGGCTGGAAAGTCAGCTGAAGTCAGTTGTGGGGTGGTGGCGGTGGGCCTTGAGTGTAGGCTGACA--TCTGAGTTATATTTCACTAGTTATAGGAGCCATGGATGTTTATTTTTTAGATGCAGTTCATTTACTTGAAGAAAACAATGTTTTGGGAAGATTAGCC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73205579 181 - 125196307 AGTCCAGGTGGAAAGAGGAAGGCTGGAAAGTCAGCTGAAGTCAGTTGTGGGGTGGTGGCGGTGGGCCTTGAGTGTAGGCTGACA--TCTGAATTATATTTCACTAGTTATAGGAGCCAtggatgtttattttttagatgcaGTTCATTTACTTGAAGAAAACAATGTTTTGGGAAGATTAGCC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72037947 181 - 125710982 AGTCCAGGTGGAAAGAGGAAGGCTGGAAAGTCAGCTGAAGTCAGTTGTGGGGTGGTGGCGGTGGGCCTTGAGTGTAGGCTGACA--TCTGAATTATATTTCACTAGTTATAGGAGCCATGGATGTTTATTTTTTAGATGCAGTTCATTTACTTGAAGAAAACAATGTTTTGGGAAGATGAGCC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75499884 181 - 121768101 AGCACATGTGGAAAGAGGAAGGCCTGAAAGTCAGCTGAAGTCAGTTGCGGG--GGCGGGGGTGGGCCTGGAGTGCAGGCTGACACCTCTGAATCGTATTTCACTAGTTGTAGGAGCCACGGATTTGTATTTTTTAAGTGCAGTTCATTTACTTGAAGAAAACAATGTTTTAGGAAGATTAGCC i calJac3.chr12 C 0 C 0 s mm10.chr14 24083662 132 + 124902244 GGAGTGGATATACCAAGGAAGGCTAGGTGGCC----------------------------------------------CAGACA--CCCACTGAACATTTTCATGATGATAAAAGCTGAGGAC-CTTATTTTTTAAGTGTAGTCCAGTGGTTTGA--ACTTCCAGTTTTAAGTGCCATTAGCC i mm10.chr14 C 0 C 0 e canFam3.chr4 27655061 64 + 88276631 I e nomLeu3.chr18 34984658 119 + 104879549 I a score=280137.000000 s hg38.chr10_KI270825v1_alt 5143 112 + 188315 TG--------GTTT-----TATTGTTCAAGGCAATGAAGCAGGAGGCACTTACAAAAGTCCAGGCTTGGGTGATAAGGGCCTAAACTTAGGCTGTTGATGAAACCCAGGTTGTAGCCGTGCGAAT s panTro4.chr10 76375749 112 + 133524379 TG--------GTTT-----TATTGTTCAAGGCAATGAAGCAGGAGGCACTTACAAAAGTCCAGGCTTGGGTGATAAGGGCCTAAACTTAGGCTGTTGATGAAACCCAGGTTGTAGCCGTGCGAAT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76043540 112 - 133410057 TG--------GTTT-----TATTGTTcaaggcaatgaagcaggaggcacttacaaaagtccaggcttgggtgataagggcctaaacttaggctgttgatgaaacccaggttgtagctgtgcgaat i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73779475 117 - 130959383 TG--------GTTTTATTGTATTGTTCAAGGCAATGAAGCAGGAGGCACTTAGAAAAGTCCAGGCTTGGGTGATAAGGGCCTAAACTTAGGCAGTTGATGAAACCCAGGTTGTAGCTATGCGAAT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75341685 117 - 133195287 TG--------GTTTTATTGTATTGTTCAAGGCAATGAAGCAGGAGGCACTTAGAAAAGTCCAGGCTTGGGTGATAAGGGCCTAAACTTAGGCAGTTGATGAAACCCAGGTTGTAGCTATGCGAAT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73205760 117 - 125196307 TG--------GTTTTATTGTATTGTTCAAGGCAATGAAGCAGGAGGCACTTAGAAAAGTCCAGGCTTGGGTGATAAGGGCCTAAACTTAGGCAGTTGATGAAACCCAGGTTGTAGCTATGCGAAT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72038128 117 - 125710982 TG--------GTTTTATTGTATTGTTCAAGGCAATGAAGCAGGAGGCACTTAGAAAAGTCCAGGCTTGGGTGATAAGGGCCTAAACTTAGGCAGTTGATGAAACCCAGGTTGTAGCTATGTGAAT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75500065 111 - 121768101 TG--------GCTT-----TATTGTGCAAGGCAATGAAAAAGGAGGCACTTAC-GGAGTCCAGGCTTGGGTGCTAAGGGCCTAAACTTAGATTGTTGATGAAACTCAGACTGTAGCTTTGCGAAT i calJac3.chr12 C 0 C 0 s mm10.chr14 24083794 110 + 124902244 TGAGGGGCCAACTT-----TATGATTCAATGCACTGAAGCAAGATGTGTTTAC-AAAGACCAGGA---------GAGGTTCTGAGCACAGGTAGCAGAGGAAACCCAGGTTGTAGCCATGTGAAG i mm10.chr14 C 0 I 1 s canFam3.chr4 27655125 85 + 88276631 TG--------CTTT-----GGTGGTTTAGGGCCCAAGAGGGGAA----------AGACTCCAA-----CATGACGAGAGTTT------------CTGCTGAGTGCTAGAGAAGAGCTGTACCAGT i canFam3.chr4 I 64 C 0 e nomLeu3.chr18 34984658 119 + 104879549 I a score=2807081.000000 s hg38.chr10_KI270825v1_alt 5255 910 + 188315 GAAAAGGAAATACCTAACTCAGTGGATTTTGGT--GATTTTTAGAGACCAaga--agagaaggattccaagatgattgaggtttctgctgagtattagagaat---aactgtatcattaagagatatgagaaggtt-aagagggccagatttgaaggagaaaatagaagtggaggattttagatatttcagactagagatgATGGGAGAACTATGAATTTTGAGATGGTCTTA--------GGGAACTGAGGGCTGGAGA---CTGATTTGGTAATCAGAAGCACCCATTTATTCAT----TCATGCCATAGGAATTTGGCTGGTAACCTCTGGAAAAATCAGCCCTGTGTTGCATGTCAAAAGGGATGTAACAGATGAAGTGGTCCCTCCCTTCAGTGAGTTAAATTTAGGATCTCAAGAGAGAAGAGATGGAGGTGAAATGAGTGAAG-TAAGGCAGGGTCTATTGTGT-----ACAAGAATGAGCGACCTAAATGTGGGGG-AAGAGTTGGCTGTGGCGTCTG--TCA-CCTACTGGTTTCCAAAGAGTATTAGACTCAGCTGAC------------TCACCATGT-GTATCCCCC---------------ATCCAC-TGTATCCCTCTCCAAATGGCAGGCTTGTCTGAAGAGAACAATGTCCATAGAGGTTACAACTGCCCTCTGCC-------CCCTGAGTAAAATGAGTTGTACAGACAATAAATATGATGCCGTTCATGAAA-----------TT-------GGAGGGAA--------------ACTCCCGG---ATCCTGGAGAAGGGAGAACTAGATCTGAACCTGTGAAGAC-GAGCAGTTTGCA----T-AAGTGGAGG---------------------------------------------------------------------------------------GGTGTAGAGGAAGCTGCCTTCCAAAAATGGCAGCTACAAAAAAATAGGGAGGATGTTTCCTAGGAGGTGGAGGAGATGTAACCCCATGGGG--AAGCTCAACTGACT---TTTCTCATGCTGTTCCCTCTGTTGAGA---ATGGCTGAAGCCAAGAA s panTro4.chr10 76375861 911 + 133524379 GAAAAGGAAATACCTAACTCAGTGGATTTTGGT--GATTTTTAGAGACCAaga--agagaaggattccaagatgattgaggtttctgctgagtattagagaat---aactgtatcattaagagatatgagaaggtt-aagagggccagatttgaaggagaaaatagaagtggaggattttagatatttcagactagagatgATGGGAGAACTATGAATTTTGAGATGGTCTTA--------GGGAACTGAGGGCTGGAGA---CTGATTTGGTAATCAGAAGCACCCATTTATTCAT----TCATGCCATAGGAATTTGGCTGGTAACCTCTGGAAAAATCAGCCCTGTGTTGCATGTCAAAAGGGATGTAACAGATGAAGTGGTCCCTCCCTTCAGTGAGTTAAATTTAGGATCTCAAGAGAGAAGAGATGGAGGTGAAATGAGTGAAGGTAAGGCAGGGTCTATTGTGT-----ACAAGAATGAGCGACCTAAATGTGGGGG-AAGAGTTGGCTGTGGCGTCTG--TCA-CCTACTGGTTTCCAAAGAGTATTAGACTCAGCTGAC------------TCACCATGT-GTATCCCCC---------------ATCCAC-TGTATCCCTCTCCAAATGGCAGGCTTGTCTGAAGAGAACAATGTCCATAGAGGTTACAACTGCCCTCTGCC-------CCCTGAGTAAAATGAGTTGTACAGACAATAAATATGATGCCGTTCATGAAA-----------TT-------GGAGGGAA--------------ACTCCTGG---ATCCTGGAGAAGGGAGAACTAGATCTGAACCTGTGAAGAC-GAGCAGTTTGCA----T-AAGTGGAGG---------------------------------------------------------------------------------------GGTGTAGAGGAAGCTGCCTTCCAAAAATGGCAGCTACAAAAAAATAGGGAGGATGTTTCCTAGGAGGTGGAGGAGATGTAACCCCATGGGG--AAGCTCAACTGACT---TTTCTCATGCTGTTCCCTCTGTTGAGA---ATGGCTGAAGCCAAGAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76043652 921 - 133410057 gaaaaggaaatacctaactcaatggattttggt--gatttttagagaccaaga--agagaaggattccaagatgattgaggtttctgctgagtattagagaat---aactgtatcattaagagatatgagaaggtt-aagagggccagatttgaaggagaaaatagaagtggaggattttagatatttcagactagagatgATGGGAGAACTATGAATTTTGAGACGGTCTTA--------GGGAACTGAGGGCTGGAGA---CTGATTTGGTAATCAGAAGCACCCATTTATTCAT----TCATGCCATAGGAATTTGGCTGGTAACCTCTGGAAAAACCAGCCCTGTGTTGCATGTCAAAAGGGATGTAAAAGATGAAGTGGTCCCTCCCTTCAGTGAATTAAATTTAGGATCTCAAGAGAGAAGAGATGGAGGTGAAATGAGTGAAG-TAAAGCAGGGTCTATTGTGTACAAGACAAGAATGAGCGACCTAAATGTGGGGG-AAGAGTTGGCTGTGGCATCTG--TCG-CCTATTGGTTTCCAAAGAGTATTAGACTCAGCTGAC------------TCACCATGTGGTATCCCCC---------------ATCCAC-TGTGTCCCTCTCCAAATGGCAGACTTGTCTGAAGAGAACAATGTCCATAGAGGTTACAACTGTCCTCTGCC-------CCCTGAGTAAAATGAGTTGTACAGACAATAAATATGATGCCGTTCATGAAA-----------TT-------GGAGGGAA--------------ACTCCTGG---ATCCTGGAGGAGGCAGAACTAGATCTGAACCTGCGACGACTGAGCAGTTTGCATGAGT-AAGTGGAGG---------------------------------------------------------------------------------------GGGGTAGAGGAAGCTGCCTTCCAAAAATGGCAGCTACAAAAAAATAGGGAGGATGTTTCCTAGGAGGTGGAGGAGATGTAACCCCATGGGG--AAGCTCAACTGACT---CTTCTCATGCTGTTCCCTCTGTTGAGA---ATGGCTGAAGCCAAGAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34984777 913 + 104879549 GAAAAGGAAATACCTAACTCAATGGATTTTGGT--GATTTTTAGAGACCAaga--aaagaaggattccaagatgactgaggtttctgctgagtattaaagaat---aactgtatcattaagagatatgagaaggtt-aagagggccagatttgaaggagaaaatagaagtagaggattttagatatttcagactagagatgATGGGAGAACTATGAATTTTGAGACGGTCTTA--------GGAAATTCAGGGCTGGAGA---CTGATTTGGTAATCAGAAGCACCAATTTATTCAT----TCATGCCATAGGAATCTGGGTGGTAACCTCTGGAAAAACCAGCCGTGTGTTGCATGTCAAAAGGGATGTAAAAGATGAAGTGGTCCCTCCCTTCAGTGAATTAAATTTAGGATCTCAAGAGAGAAGAGATGGAGGTGAAATGAGTGAAG-TAAGGCAGGGTCTATTGTGT-----ACAAGAATGAGCGACCTAAATGTGGGGG-AAGAGTTGGCTGTGGCATCCG--TCA-CCTATTGGTTTCCAAAGAGTATTAGACTCAGCTGAC------------TCACCATGTGGTATCCCCC---------------ATCCAC-TGTGTCCCTCTCTAAATGGCAGGCTTGTCTGAAGAGAACAATGCCCACAGAGGTTACAACTGTCCTCTGCC-------CCCTGAGTAAAATGAGTTATACAGACAATAAATATGATGCCGTTCATGAAA-----------TT-------GGAGGGAA--------------ACTCCTGG---ATCCTGGAGGAGGGAGAACTGGATCTGAACCTGAGATGGCTGAGCAGTTTGCATGAGT-AAGTGGAGG---------------------------------------------------------------------------------------AGGGTAGAGGAAGCTGCCTTCC-AAAACGGCAGCTAC-AAAAAATAGGGAGGATGTTTCCTAGGAGGTGGAGGAGATGTAACCCCATGGGG---AGCTCAACTGACT---TTTCTGAAGC--TCCAATGTGGTGGAATTCATGGCTGACGCCGATA- i nomLeu3.chr18 I 119 I 392 s rheMac3.chr9 73779592 911 - 130959383 GAAAAGGGAATACCTAACTCAATGG--------------------GACCAaga--agagaaggattccaagatgattgaggtttctgctgagtattagagaataataactgtatcattaagagatatgagaaggtt-gagagggtcagatttgaagcagaaaatagacgtggaggattttagatatttcagactagagatgATAGGAGAACTATGAATTTTGAGATGGTCATA--------GGGAATTGAAGGCTGGAGA---CTGATTTGGTAATCAGAAGTACCCATTTATTCAT----TCATGCCATAAGAATTTGGCTGGTAACCTCTGGAAAAACCAGCCCTGTGCTGCATGTCAAAAGGGATGTAAAAGATGAAGTGGTCCCTCCCTTCAGTGAATTAAATTTAGGATCTCAAGAGAGCAGAGATGGAGGTGAGATGAGTGAAG-CAAGGCAGGGTCTGTTGTGT-----ACAAGAATGAGCGACCTAAATGTGGGGA-AAGAGTTGACTGTGGCATCCA--TCA-CCTACTGGTTTCCAAAGAGTATTAGACTCAGCTGAC------------TCACCATGTGGTATCCCCC---------------ATCCAC-TGTGTCCCTCCCCAAATGGCAGGCTTGTCTGAAGAGAACAATGTCCATAGAGGTTACAACTGTCCTCTGCT-------CCCTGAGTAAAATGAGTTGTACAGACAATAAATATGATGCCGTTCATGAAATGGAGAGACAGTT-------GGAGGAAA--------------ACTCCTAG---ATCCTGGAGGAGGGAGAACTGGATGTGAAGCCGAGATGACTGAGCAGTTTGCATGAGT-AAGTGGAGG---------------------------------------------------------------------------------------GGGGTAGAGGAAGCTGCCTTCCAAAAACGGCAGCTACAGAAAAATAGGGAGGATGTTTCCTAGGAGGTGGAGGAGATGTAATCCCATGGGA---AACTCAACTGACT---TTTCTCATGCTGTTCCCTCTGTTGAGA---ATGGCTGAAGCCGAGAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75341802 911 - 133195287 GAAAAGGGAATACCTAACTCAATGG--------------------GACCAAGA--AGAGAAGGATTCCAAGATGATTGAGGTTTCTGCTGAGTATTAGAGAATAATAACTGTATCATTAAGAGATATGAGAAGGTT-GAGAGGGTCAGATTTGAAGCAGAAAATAGACGTGGAGGATTTTAGATATTTCAGACTAGAGATGATAGGAGAACTATGAATTTTGAGATGGTCATA--------GGGAATTGAAGGCTGGAGA---CTGATTTGGTAATCAGAAGTACCCATTTATTCAT----TCATGCCATAAGAATTTGGCTGGTAACCTCTGGAAAAACCAGCCCTGTGCTGCATGTCAAAAGGGATGTAAAAGATGAAGTGGTCCCTCCCTTCAGTGAATTAAATTTAGGATCTCAAGAGAGCAGAGATGGAGGTGAGATGAGTGAAG-CAAGGCAGGGTCTGTTGTGT-----ACAAGAATGAGCGACCTAAATGTGGGGA-AAGAGTTGACTGTGGCATCCA--TCA-CCTACTGGTTTCCAAAGAGTATTAGACTCAGCTGAC------------TCACCATGTGGTATCCCCC---------------ATCCAC-TGTGTCCCTCCCCAAATGGCAGGCTTGTCTGAAGAGAACAATGTCCATAGAGGTTACAACTGTCCTCTGCT-------CCCTGAGTAAAATGAGTTGTACAGACAATAAATATGATGCCGTTCATGAAATGGAGAGACAGTT-------GGAGGAAA--------------ACTCCTAG---ATCCTGGAGGAGGGAGAACTGGATGTGAAGCCGAGATGACTGAGCAGTTTGCATGAGT-AAGTGGAGG---------------------------------------------------------------------------------------GGGGTAGAGGAAGCTGCCTTCCAAAAACGGCAGCTACAGAAAAATAGGGAGGATGTTTCCTAGGAGGTGGAGGAGATGTAATCCCATGGGA---AACTCAACTGACT---TTTCTCATGCTGTTCCCTCTGTTGAGA---ATGGCTGAAGCCGAGAA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73205877 911 - 125196307 GAAAAGGGAATACCTAACTCAATGG--------------------GACCAAGA--AGAGAAGGATTCCAAGATGATTGAGGTTTCTGCTGAGTATTAGAGAATAACAACTGTATCATTAAGAGATATGAGAAGGTT-GAGAGGGTCAGATTTGAAGCAGAAAATAGACGTGGAGGATTTTAGATATTTCAGACTAGAGATGATAGGAGAACTATGAATTTTGAGATGGTCATA--------GGGAATTGAAGGCTGGAGA---CTGATTTGGTAATCAGAAGtacccatttattcat----tcataccaTAAGAATTTGGCTGGTAACCTCTGGAAAAACCAGCCCTGTGCTGCATGTCAAAAGGGATGTAAAAGATGAAGTGGTCCCTCCCTTCAGTGAATTAAATTTAGGATCTCAAGAGAGCAGAGATGGAGGTGAGATGAGTGAAG-CAAGGCAGGGTGTGTTGTGT-----ACAAGAATGAGCGACCTAAATGTGGGGA-AAGAGTTGACTGTGGCATCCA--TCA-CCTACTGGTTTCCAAAGAGTATTAGACTCAGCTGAC------------TCACCATGTGGTATCCCCC---------------ATCCAC-TGTGTCCCTCCCCCAATGGCAGGCTTGTCTGAAGAGAACAATGTCCATAGAGGTTACAACTGTCCTCTGCT-------CCCTGAGTAAAATGAGTTGTACAGACAATAAATATGATGCCATTCATGAAATGGAGAGACAGTT-------GGAGGAAA--------------ACTCCTAG---ATCCTGGAGGAGGGAGAACTGGATGTGAAGCCGAGATGACTGAGTAGTTTGCATGAGT-AAGTGGAGG---------------------------------------------------------------------------------------GGGGTAGAGGAAGCTGCCTTCCAAAAACGGCAGCTACAGAAAAATAGGGAGGATGTTTCCTAGGAGGTGGAGGAGATGTAATCCCATGGGA---AACTCAACTGACt---tttctcatgctgttccctctgttgAGA---ATGGCTGAAGCCGAGAA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72038245 910 - 125710982 GAAAAGGGAATACCTAACTCAATGG--------------------GACCAAGA--AGAGAAGGATTCCAAGATGATTGAGGTTTCTGCTGAGTATTAGAGAATAATAACTGTATCATTAAGAGATATGGGAAGGTT-GAGAGGGTCAGATTTGAAGCAGAAAATAGACATGGAGGATTTTAGATATTTCAGACTAGAGATGATAGGAGAACTATGAATTTTGAGATGGTCACA--------GGGAATTGAAGGCTGGAGA---CTGATTTGGTAATCAGAAATACCCATTTATTCAT----TCATGCCATAAGAATTTGGCTGGTAACCTCTGGAAAAACCAGCCCTGTGCTGCATGTCAAAAGGGATGAAAAAGATGAAGTGGTCCCTCCCTTCAGTGAATTAAATTTAGGATCTCAAGAGAGCAGAGATGGAGGTGAGATGAGTGAAG-CGAGGCAGGGTCTGTTGTGT-----ACAAGAATAAGTGACCTAAATGTGGGGA-AAGAGTTGACTGTGGCATCCA--TCA-CCTACTGGTTTCCAAAGAGTATTAGACTCAGCTGAC------------TCACCATGTGGTATCCCCC---------------ATCCAC-TGTGTCCCTCCCCAAATGGCAGGCTTGTCTGAAGAGAACAATGTCCATAGAGGTTACAACTGACCTCTGCT-------CCCTGAGTAAAATGAGTTGTACAGACAATAAATATGATGCCGTTCATGAAATGGAGAGACAGTT-------GGAGGAAA--------------ACTCCTAG---ATCCTGGAGGAGGGAGAACTGGATGTGAAGCCAAGATGACTGAGCAGTTT-CATGAGT-AAGTGGAGG---------------------------------------------------------------------------------------GGGGTAGAGGAAGCTGCCTTCCAAAAACGGCAGCTACAGAAAAATAGGGAGGTTGTTTCCCAGGAGGTAGAGGAGATGTAATCCCATGGGA---AACTCAACTGACT---TTTCTCACGCTGTTCCCTCTGTTGAGA---ATGGCTGAAGCCGAGAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75500176 880 - 121768101 GAGAAGGAAATACCTAACTCAATGGATTTTGGT--GATTTTTAGGGACCaaga--agagaagaattccaagatgattgaggtttctgctgagcatta---------aactgtatcattgagagacatgagaaggttaaagagggacagatttgaaggagaaaatagaagaggaagattttagacatttcagactagaggtgATGGGAGAACTATGAATTCTGAGACGGCAATA--------GGGAATTGAGGGCTGGAGA---CTGATTTGGTAATCAGAAGCACCCATTTATCCAT----TCATGCCATAGGAATTTGGTTGGCAACCTCTGGAAAAACCAGCCCTGTGTTGCATGTCAAAAGGGATGTAAAAGATGAAGAGGTCCCTCCCTTCCGTAAATTAAATTTAGGACCTCAAGAGAGAAGAGATGGAGGTGAAACGAGTGAAG-TGAGGCATGGTCTGTTGTGA-----ACAAGAATGAGCCACCTCACTGTGGGGGAAAAAGTTGGCGATGGCATCCG--TCA-CCCATTGGTTTCCAAAGAGTATTGGACTCAGTTGAC------------TCACCATGTGGTAGCCCCC---------------ATCCAC-TGTGTCCCTCCCCAAATGACAGGCTTGTCTGCAGAGAACAATGTCCACAGAGGTTACAGCTGTCCTCGGCT-------CCCTGAGTGAAAGAAGTTGT---TACAGTAAATATGATGCCATTCATGCAGTGGAGAGATCGCT-------GG-GGAAA--------------ATTCCTGG---ATCCTGAAGGAGGGAGAACTGTATCTGAACATG-----------------------------------------------------------------------------------------------------------------------------GAAGAGAAAGCTGACTTCCCAGA--GGTAGCTCCATTAAAATAGGGAGGATGTCTCCTAGGAGGTGAAGGAGATGTAACCCCATAGGG--AAGCTCAACTGACT---TTTCTCGTGCTGTTCCGTCTGTTGAGA---ATGGCTGAAGCTGAGAA i calJac3.chr12 C 0 C 0 s mm10.chr14 24083905 755 + 124902244 AAAATATAAATAACCCATTGTATGG-----GGTAGGGGATTTGGGGACTGAGACTGGGAAAGGACTCCAAGAGCATGGGGGATTAAACTGAAGA--------------------CATTTAGGCATTTGAAATGGCT------------ATCTGATGC---------------------CTGAGCATGCAGGGCTAGA----------------------------------------------------------AGAGA---AACATTAGATAAT---------TCatttattcat----tcaacacaca-----cttgttggtaacctctggcatatccagctctatgttgggtatcaaaaaggatataaaagat-aggtggtgcctccctttgaagaattAAATGTGGGCTCTCAAATGAGAAAAGATGAAGCAAACGT-AGTGGAA-CTGGCCCGAGGCTGGCTGCT-----GGACAAATGGACTG--TGGATCCAGGAG-AGG----GGCTGTGGGCTCTGACTCA-CCATC---TTTCCAATGTCTATATGGCTGGCCTGAT------------TTACCACATGGTAATCCTC-----TTCTCTCCAACTCCAC-TCTGTCCCTCTGCAAACAGCAGACTCATCTGAAGAGAATAGCGTCCTTAGAGGTCACAAGTATCCTCTGGCCAGACAGCCTTGAGGAAAACGAGTGGTCCAGATAACAGCTATGATGCAGCTCATGGAATAGAGGG-------------GGAGGGGG--------------GTCTCAAGTTTTTCCTAGAGGAGGTGGAGC-AGGTTGGAACCCTAAACCAT------GTTTTCA----T-TGGTGGTGT---------------------------------------------------------------------------------------T-----------------------------------------AATGGGGAGGAT------------GCAGAGTAGGTCTGGTCTTAGAGAGTAGATCTGGACCTACTACGATCTTCATGCTACGTACTCTGTCCAGG---ATG---AATTTCTATA- i mm10.chr14 I 1 C 0 s canFam3.chr4 27655210 939 + 88276631 ---AAGGGGATGCCAAGGTCAA-----------------------GAACAAGG--GGAGA-----------------------TCTGAAGGGGA---------------------------AAATAGGAGGATTTT-AGGC-------ATTTG---------------------GACTTGAGGTGT--------------GATGGAAGAGCTATGGATTTTGAGATGGTCATCTGACACCTGGGAAGTAAGGGATAGAGAAGTCTCATTCAATAATT-GGAGCATCCATCCACCCATCTGCCcattcaacatgcattt-gttggtagcctccaccatacccagccctgtgttagg-gtcaaa--gggtataaaaggtgaaGTATTCCCTCCCTTTGAATAATTAAATTTAGGCTCTCAAGAGAGAA------------AAACTAGTTGAG-TAAGGCAGGGTCTTTTGGGC-----ACA-GAATAAGTGACCCAgaagtgaggg----agctggctgtgacatctg--tcaccctgttgtcttccagaaagtatttaattccactgacctgtggatacctttaccatgtgg-atccccctttacttcttcccaactccacttgtggtcctccccaaagggt-gacttgtctgaagagaacggtgttcccagagcccacagctgtactctggtcaagggtccttgagtaAAATGGGTAGTAAAGACCAGGAGAGGG-----GTTCACAGAACGGAGAAATCCTCTAAGAAAGGAGGGAAGTTAGGGCCTCCACACTCCTGG---ATTCCAGAGGAGGTGGGACCGAATCTGAATCCTAAATTGTTGAAGCATTGGCCTAAGTGAAGCGGAAGCAGCTCTAAGAGATACAAGCCAGCTTCATCTAATAGAAAGTACCTGATGTCAGGCAAAGCCTCCTTAACCGGCCAAACCTCAACCACGAGGAGGAGGAAGCAGCCTTCCCTG--TGGCCGCTGGGTTAAGGTGAGAACCATGTCCCCCTGGA-----AGGTGGCGTGTGCCCATGGCA--TTGCTTGCCTGACC---CCTCTGGTGCTGTTCCCTCCATCTGGA---ATTGGCTTCACCAAGAA i canFam3.chr4 C 0 C 0 a score=3604380.000000 s hg38.chr10_KI270825v1_alt 6165 1126 + 188315 GCCAGTGTCAGAAACTAAAGAAAGGGA----------AACAAGAGTCGAGGTGGA-----AGATAAG--GGT-----ACAGGGTTGAG-AGAGGAATGGGTGACAACTCCACG--ATTTTCAAGTGAAGCTGAACCCCCAACTTCCAACT--------TCT---TGTTTACGTAGCAGTGAACT-GCCTAGAGCTGTTTTTTGCAGA--ATCGTA------TAGAGTTGACCTCATGCATGTTTC----------------------TTTAACTTCTA--------------TCACTGACGTG--TGTTTCAAT----TTCCTTGTTTCATGATACCCTTTCTTAAGCTT---ACGTGAATATGTGTAA-TA--CATTTTTAAATGTGACATATGTTAATTTTAGGCATGTCAGAGTAAAA-CAGCCACTATCAAGGGAAATCTG-AAATCTGAAAT-CTGCAGGGTTTGATCTTCCTCTCAGTAATTTGAC-ATCAAACTGTGTG--TCCCATACTTTT-------------------------AAGAAAAAAC------TGTTTGTGGTATACCCGCAA-----ATCA----CGGGAGATCAT-ACATA-TCTGAAGGTGCTGTTTATGAAACTACATTACTCTCAAACTC--CTTGGCTGCCTGTTT---TTTGTTTGTTTTGCCTTTAATAGGAGTTTTCTTTACTTAT-ATGAATAAAGTGAAGACAGGGAGGACCAAAAAAAAGAATACAGTCACAATGAAATTAACTTTGCTACTTATTCCTACTTGGCCACCAAGATACAATA-GATGTTGAGGCTGTGAGTAGGATGAGGGTTTGTAGTCATTTCCATAAATGGTCACACCCC-------------ATATTAATGGAC-AGATGGCCCATGTGGCAAG-AGAGCTGG-------TTGGTCAATGGAAC---AGGACTTGCTG---TAACCAGTGCTGAATAAGCTCACCAGCATCCAGCCT-GAGATGAGGGGGGG------AAG--TCTGAGAGGCTTTGTCT-GTCACTTTCAATTAACCAGGATCAACCAAGGTAAG---CTTCTTGTCCTGACTGCTGAAAAGTTCTCACCCTAAAGAA-TCCTACCTTCCCCGATGCAAGATGGAAAATTGCTCAAACACTTAAAGCTATTCTCAATGAGAAACAAAAAA-------------AGGACC--------------------ACAGATACAAAGTAAGATCCTT-------TTGTTT----ATTAGAAGCTATTTCCACAAACTGAACAATTTGGA------GACTGAGCA-TCCTTACA-CTGTGTATGTAGCTCTAGCAAATCCTACTATTTTAC s panTro4.chr10 76376772 1125 + 133524379 GCCAGTGTCAGAAACTAAAGAAAGGGA----------AACAAGAGTCGAGGTGGA-----GGATAAG--GGT-----ACAGGGTTGAG-AGAGGAATGGGTGACAACTCCACG--ATTTTCAAGTGAAGCTGAACCCCCAACTTCCAACT--------TCT---TGTTTACGTAGCAGTGAACT-GCCTAGAGCTGTTTTTTGCAGA--ATCTTA------TAGAGTTGACCTCATGCATGTTTC----------------------TTTAACTTCTA--------------TCACTGAAGTG--TGTTTCAAT----TTCCTTGTTTCATGATACCCTTTCTTAAGCTT---ACGTGAATATGTGTAA-TA--CATTTTTAAATGTGACATATGTTAATTTTAGGCATGTCAGAGTAAAA-CAGCCACTATCAAGGGAAATCTG-AAATCTGAAAT-CTGCAGGGTTTGATCTTCCTCTCAGTAATTTGAC-ATCAAACTGTGTG--TCCCATACTTTT-------------------------AAGAAAAAAC------TGTTTGGGGTATACCCGCAA-----ATCA----CGGGAGATCAT-ACATA-TCTGAAGGTGCTGTTTATGAAACTACATTACTCTCAAACTC--CTTGGCTGCCTGTTT---TTTGTTTGTTTTGCCTTTAATAGGAGTTTTCTTTACTTAT-ATGAATAAAGTGAAGACAGGGAGGACCAGAAAAAAGAATACAGTCACAATGAAATTAACTTTGCTACTTATTCCTACTTGGCCACCAAGATACAATA-CATGTTGAGGCTGTGAGTAGGATGAGGGTTTGTAGTCATTTCCATAAATGGTCACACCCC-------------ATATTAATGGAC-AGATGGCCCATGTGGCAAG-AGAGCTGG-------TTGGTCAATGGAAC---AGGACTTGCTG---TAACCAGTGCTGAATAAGCTCACCAGCATCCAGCCT-GAGATGAGGGGGGG------ACG--TCTGAGAGGCTTTGTCT-GTCACTTTCAATTAACCAGGATCAACCAAGGTAAG---CTTCTTGTCCTGACTGCTGAGAAGTTCTCACCCTAAAGAA-TCCTACCTTCCCCGATGCAAGATGGAAACTTGCTCAAACACTTAAAGCTATTCTCAATGAGAAACAAAAAA--------------GGACC--------------------ACAGATACAAAGTAAGATCCTT-------TTGTTT----ATTAGAAGCTATTTCCACAAACTGAACAATTTGGA------GACTGAGCA-TCCTTACA-CTGTGTATGTAGCTCTAGCAAATCCTACTATTTTAC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76044573 1119 - 133410057 GCCAGTGTCAGAAACTAAAGAAAGGGA----------AACAAGAGTCGAGGTGGA-----GGATAAG--GGT-----ACAGGGTTGAG-AGAGGAATGGGTGACAACTCCACG--ACTTTCAAGTCAAGCTGAACCCCCAACTTCCAACT--------TCT---TGTTTACGTAGCAGTGAACT-GGCTAGAGCTGTTTTTTGCAGA--ATCTTA------TAGAGTTGACCTCATGCATGTTTC----------------------TTTAACTTCTA--------------TCACTGAAGTG--TGTTTCAAT----TTCCTTGTTTCATGATACCCTTTCTTAAGCTT---ACGTGAATATGTGTAA-TA--CATTTTTAAATGTGACATATGTTCATTTTAGGCATGTCAGAGTAAAA-TAGCCACTATCAAGG-------G-AAATCTGAAAT-CTGCAGGGTTTGATCTTCCTCTCAATAATTTGAC-ATCAAACTGTGTG--TCCCATACTTTT-------------------------AAGAAAAAAC------TGTTTGTGGTATACCTGCAA-----ATCA----CGGGAGATCAT-ATATG-TCTGAAGGTGCTGTTTATGAAACTACATTACTCTCAAACTC--CTTGGCTGCCTGTTT---TTTGTTTCTTTTGCCTTTAATAGGAGTTTTCTTTACTTAC-ATGAATAAAGTGAAGACAGGGAGGACCAGAATAAAGAATACAGTCACAATCAAATTAATTTTGCTACTTATTCCTACTTGGCCACCAAGATACAATA-GATGTTGAGGCTGTGAGTAGGATGAGGGTTTGTAGTCATTTCCATAAATGGTCACACCCC-------------ATATTAATGGAC-AGATGGCCCATGTGGCAAG-AGAGCTGG-------TTGGTCAGTGGAAC---AGGACTTGCTG---TACCCAGTGCTGAATAAGCTCACCAGCATCCAGCCT-GAGATGAGTGGGGG------AAG--TCTGAGAGGCTTTGTCT-GTCACTTACAATTACCCAGGATCAACCAAGGTAAG---CTTCTCGTCCTGACTGCTGAAAAGTTCCCACCCCAAAGAA-TCCTACCTTCCCTGATGCAAGATGGAAACTTGCTCAAACACTTAAAGCAATTCTCAATAAGAAACAAAAAA-------------AGGACC--------------------ATAGATACAAAGTAAGATCCTT-------TTGTTT----ATTAGAAGCTATTTCCACAAACTGAACAATTTGGA------GACTGAGCA-TCCTTACA-CTGTGTATGTAGCTCTAGCAAATCCTACAATTTTAC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34986082 1120 + 104879549 GCCAGTGTCAGAAACTAAAGAAAGGGA----------AACAAGAGTCGATGTGGA-----GGATAAG--GGT-----ACAGGGTTGAG-AGAGGAATGGGTGACAACTCCACG--ATTTTCAAGTGAAGCTGAACCCCCAACTTCCAACT--------TCT---TGTTTACGTAGCAGTGAACT-GCCTAGAGCTGTTTTTTGCAGA--ATCTTA------CAGAGTTGACCTCATGCATGTTTC----------------------TTTAACTTCTA--------------TCACTGAAGTG--TGTTTCAAT----TTCCTTGTTTCATGATACCCTTTCTTAAGCTT---ACGTGAATATGTATGA-TA--CATTTTTAAATGTGACATATGTTAATTTTAGGCATGTCAGAGTAAAA-CAGCCACTATCAAAG-------G-AAATTTGAAAT-CTGCAGGGTTTGATCTTCCTCTCAATAATTTGAC-ATCAAACAGTGTGTCTCCCATACTTTT-------------------------AAGAAAAAAC------TGTTTGTGCTATACCCGCAA-----ATCA----TGGGAGATCAT-ACATG-TCTGAAGATGCCGTTTCTGAAACTACATTACTCTCAAACTC--CTTGGCTGCCTGTTT---TTTGTTTGTTTTGCCTTTAATAGGAG-TTTCTTTACTTAC-ATGAATAAAGTGAAGACAGGGAGGACCAGAATAAAGAATACAGTCACAATCAAATTAATTTTGCTACTTATTCCTACTTGGCCACCAAGATACAAAA-GATGTTGAGGCTGTGAGTAGGATGAGGGTTTGTAGTCATTTCCATAAATGGTCACACCCC-------------ATATTAATGGAC-AGATGGCCCATGTGGCAAG-AGAGCTGG-------TTGGTCAGTGGAAC---AGGACTTGCTG---TATCCAGTGCTGAATAAGCTCACCAGCATCCAGCCT-GAGATGAGGGGGGG------GAG--TCTGAGAGGCTTTGTCT-GTCACTTGCAATTACCCAGGATCAACCAAGGTAAG---CTTCTCATCCTGACTGCTGAAAAGTTCTCACCCCAAAGAA-TCCTACCTTCCCTGATGCAAGATGGAAACTTGCTCAAACACTTAAAGCTATTCTCAATGAGAAACAAAAAA-------------AGGACC--------------------ATACATACAAAGTAGGATCCTT-------TTGTTT----ATTAGAAGCTATTTCCACAAACTGAACAATTTGGA------GACTGAGCA-TCCTTACA-CTGTGTATGTAGCTCTAGCAAATCCTACTATTTTAC i nomLeu3.chr18 I 392 C 0 s rheMac3.chr9 73780503 1123 - 130959383 GCCAGCGTCAGAAACTAAAGAAAGGGA-------AACAACAAGAGGCGAGGTGGA-----GGATAAG--GGT-----ACAGTATTGAG-AGAGGAATGGGTGACAACTCCACG--ATTTTCAAGTGAAGCTGAACCCCCAACTTCCAACT--------TCT---TGTTTACGTAGCAGTGAACT-GCCTAGAGCTGTTTTTTGCAGA--ATCTT--------AGAGTTGACCTCATGCATGTTTG----------------------TTTGACTTCAA--------------TCACTGAAGTG--TGTTTCAAT----TTCTTTGTTTCATGATACCCTTTCTTAAGCTT---ATGTGAATATGTGTAA-TA--CATTTTCAAATGTGACATATGTTAATTTTAGGCATATCAGAGTAAAA-CAGTCACTATCAAGG-------G-AAATCTGAAAT-CTGCAGGGTTTGATCTTCCTCTCAATACTTTGAC-ATCAAACAGTATG--TCCCATACTTTT-------------------------AAGAAAAAAC-------ATTTGTGGTATACCTGCAA-----ACCA----TGGGAGATCAT-ACGTGTTCCAAAGTTGCTGTTTCTGAAACTACATTACTCTCAAACTC--CTTGGCTGCCTTTTTTTGTTTGCTTGTTTTGCCTTTAAT-GGAGTTTTCTTTACTTAC-CTGAATAAAGTGAAGACAGGGAGGACCAGAATAAAGAAAGCAGTCACAATCAAATTAATTTTGCTACTTATTCCTACTTGGCCACCAAGATACAATA-GATGTTGAGGCTATGAGTAGGATGAGGGTTTGTAATCATTTCCATAAATGGTCACACCCC-------------ATATTAATGGAC-AGATGGCCCATGTGGCAAG-AGAGCTGG-------TTGGTTAATGGAAC---AGGACTTGCTG---TGCCCAGTGCTGAATAAGCTCACCAGCATCCAGCCC-GAGATGAGGCGGGG------AAG--TCCGGGAGGCTTTGTCT-GTCACTTGCAATTACCCAAGATCAACCAAGGTAAG---CTTCTTGTCCTGACTGCTGAAAAGTTCTCACCCCAAAGAA-TCCTACCTTCCCCGATGCAAGATGGAAACTTGCTCAAACACTTAAAGCTATTCTCAATGAGAAACAAAAAA------------AAGGACC--------------------ATAGATACAAAGTAGGATCCTT-------TTGTTT----ATTAGAAACTATTTCCACAAACTGAACAATCCGGA------GACTGAGCA-CCCATACA-CTGTGTATGTAGCTCTAGCAAATCCTACTATTTTAC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75342713 1123 - 133195287 GCCAGCGTCAGAAACTAAAGAAAGGGA-------AACAACAAGAGGCGAGGTGGA-----GGATAAG--GGT-----ACAGTATTGAG-AGAGGAATGGGTGACAACTCCACG--ATTTTCAAGTGAAGCTGAACCCCCAACTTCCAACT--------TCT---TGTTTACGTAGCAGTGAACT-GCCTAGAGCTGTTTTTTGCAGA--ATCTT--------AGAGTTGACCTCATGCATGTTTG----------------------TTTGACTTCAA--------------TCACTGAAGTG--TGTTTCAAT----TTCTTTGTTTCATGATACCCTTTCTTAAGCTT---ATGTGAATATGTGTAA-TA--CATTTTCAAATGTGACATATGTTAATTTTAGGCATATCAGAGTAAAA-CAGTCACTATCAAGG-------G-AAATCTGAAAT-CTGCAGGGTTTGATCTTCCTCTCAATACTTTGAC-ATCAAACAGTATG--TCCCATACTTTT-------------------------AAGAAAAAAC-------GTTTGTGGTATACCTGCAA-----ACCA----TGGGAGATCAT-ACGTGTTCCAAAGTTGCTGTTTCTGAAACTACATTACTCTCAAACTC--CTTGGCTGCCTTTTTTTGTTTGCTTGTTTTGCCTTTAAT-GGAGTTTTCTTTACTTAC-CTGAATAAAGTGAAGACAGGGAGGACCAGAATAAAGAAAGCAGTCACAATCAAATTAATTTTGCTACTTATTCCTACTTGGCCACCAAGATACAATA-GATGTTGAGGCTATGAGTAGGATGAGGGTTTGTAATCATTTCCATAAATGGTCACACCCC-------------ATATTAATGGAC-AGATGGCCCATGTGGCAAG-AGAGCTGG-------TTGGTTAATGGAAC---AGGACTTGCTG---TGCCCAGTGCTGAATAAGCTCACCAGCATCCAGCCC-GAGATGAGGCGGGG------AAG--TCCGGGAGGCTTTGTCT-GTCACTTGCAATTACCCAAGATCAACCAAGGTAAG---CTTCTTGTCCTGACTGCTGAAAAGTTCTCACCCCAAAGAA-TCCTACCTTCCCCGATGCAAGATGGAAACTTGCTCAAACACTTAAAGCTATTCTCAATGAGAAACAAAAAA------------GAGGACC--------------------ATAGATACAAAGTAGGATCCTT-------TTGTTT----ATTAGAAACTATTTCCACAAACTGAACAATCTGGA------GACTGAGCA-CCCATACA-CTGTGTATGTAGCTCTAGCAAATCCTACTATTTTAC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73206788 1120 - 125196307 GCCAGCGTCAGAAACTAAAGAAAGGGA----------AACAAGAGGCGAGGTGGA-----GGATAAG--GGT-----ACAGTATTGAG-AGAGGAATGGGTGACAACTCCACA--ATTTTCAAGTGAAGCTGAACCCCCAACTTCCAACT--------TCT---TGTTTACGTAGCAGTGAACT-GCCTAGAGCTGTTTTTTGCAGA--ATCTT--------AGAGTTGACCTCATGCATGTTTG----------------------TTTGACTTCAA--------------TCACTGAAGcg--tgtttcaat----ttctttgtttcatGATACCCTTTCTTAAGCTT---ATGTGAATAtgtgtaa-ta--catttttaaatgtgacaTATGTTAATTTTAGGCATATCAGAGTAAAA-CAGTCACTATCAAGG-------G-AAATCTGAAAT-CTGCAGGGTTTGATCTTCCTCTCAATACTTTGAC-ATCAAACAGTATG--TCCCATACTTTT-------------------------AAGAAAAAAC-------GTTTGTGGTATACCCGCAA-----ACCA----TGGGAGATCAT-ACGTGTTCCAAAGTTGCTGTTTCTGAAACTACATtactctcaaactc--cttggctgcctttttttgtttgcttgttttgcctTTAAT-GGAGTTTTCTTTACTTAC-CTGAATAAAGTGAAGACAGGGAGGACCAGAATAAAGAAAGCAGtcacaatcaaattaattttGCTACTTATTCCTAATTGGCCACCAAGATACAATA-GATGTTGAGGCTATGAGTAGGATGAGGGTTTGTAATCATTTCCATAAATGGTCACACCCC-------------ATATGAATGGAC-AGATGGCCCATGTGGCAAG-AGAGCTGG-------TTGGTTAATGGAAC---AGGACTTGCTG---TGCCCAGTGCTGAATAAGCTCACCAGCATCCAGCCC-GAGATGAGGCGGGG------AAG--TCCGGGAGGCTTTGTCT-GTCACTTGCAATTACCCAAGATCAACCAAGGTAAG---CTTCTTGTCCTGACTGCTGAAAAGTTCTCACCCCAAAGAA-TCCTACCTTCCCCGATGCAAGATGGAAACTTGCTCAAACACTTAAAGCTATTctcaatgagaaacaaaaaa------------gaggacC--------------------ATAGATACAAAGTAGGATCCTT-------TTGTTT----ATTAGGAACTATTTCCACAAACTGAACAATCTGGA------GACTGAGCA-CCCATACA-CTGTGTATGTAGCTCTAGCAAATCCTACTATTTTAC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72039155 1121 - 125710982 GCCAGCATCAGAAACTAAAGAAAGGGA-------AACAACAAGAGGCGAGGTGGA-----GGATAAG--GGT-----ACAGTATTGAG-AGAGGAATGGGTGACAACTCCATG--ATTTTCAAGTGAAGCTGAACCCCCAACTTCCAACT--------TCT---TGTTTACGTAGCAGTGAACT-GCCTAGAGCTGTTTTTTGCAGA--ATCTT--------AGAGTTGACCTCATGCATGTTTG----------------------TTTGACTTCAA--------------TCACTGAAGTG--TGTTTGAAT----TTGTTTGTTTCATGATACCCTTTCTTAAGCTT---ATATGAATATGTGTAA-TA--CATTTTTAAATGTGACATATGTTAATTTTAGGCATATCAGAGTAAAA-CAGTCACTATCAAGG-------G-AAATCTGAAAT-CTGCA-GATTTGATCTTCCTCTCAATACTTTGAC-ATCAAACAGTATG--TCCCATACTTTT-------------------------AAGAAAAAAC-------GTTTGTGGTATACCCGCAA-----ACCA----TGGGAGATCAT-ACGTGTTCCAAAGTTGCTGTTTCTGAAACTACATTACTCTCAAACTC--CTTGGCTGCCTTTTTTTGTTTGCTTGTTTTGCCTTTAAT-GGAGTTTTCTTTACTTAC-CTGAATAAAGTGAAGACAGGGAGGACCAGAATAAAGAAAGCAGTCACAATCAAATTAATTTTGCTACTTTTTCCTACTTGGCCGCCAAGATACAATA-GATGTTGAGGCTGTGAGTAGGATGAGGGTTTGTAATCACTTCCATAAATGGTCACACCCC-------------ATATTAATGGAC-AGATGGCCCATGTGACAAG-AGAGCTGG-------TTGGTTGATGGAAC---AGGACTTGCTG---TGCCCAGTGCTGAATAAGCTCACCAGCATCCAGCCC-GAGATGAGGCGGGG------AAG--TCCAGGAGGCTTTGTCT-GTCACTTGCAATTACCCAAGATCAACCAAGGTAAG---CTTCTTGTCCTGACTGCTGAAAAGTTCTCACCCCAAAGAA-TCTTACCTT-CCCGATGCAAGATGGAAACTCACTCAAACACTTAAAGCTATTCTCAATGAGAAACAAAAAA------------GAGGATC--------------------ATAGATACAAAGTAGGATCCTT-------TTGTTT----ATTAGAAACTATTTCCACAAACTGAACAATCTGGA------GACTGAGCA-CCCATACA-CTGTGTGTGTAGCTCTAGCAAATCCTACTATTTTAC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75501056 1118 - 121768101 GCCAGCATCAGAAACTAAACAAAGGGA-------AAAAGTAAGAGTCAAGGTGGA-----GGATAAG--GGT-----ACAGGGTTGAGAAGAGGAATGGGCAACAAGTCCACG--ATTTTCAAGTGAAGCTGAACCCCCAGCTTCTAACT--------TAT---TGTTTACATAGCAGTGAACT-GCCTAGAGC----TTTTGCAGA--ATCTA-------TAGAGGTGACCTTATGCATGTTTC----------------------TTTAACTTCTA--------------TTGCTGAAGTG--TGTTTCAAT----TTCCTTGCTTCGTGATACCCTTTCTGAAACTT---ACATGAATATGTGTAA-TAGGTAAATTTTAATGTGACATACGTTAATTTTAGGCATGTCAGAGT-AAG-CAGCCACTATCAAGG-------G-AAATCTGAACT-CCGCAGGGTTGGATCTTCCTCTCAATAATTTGAC-ATCAAATGGTGTG--TCCCATCCTTAT-------------------------AAGAAAAAAC------TGCCTGTGGTCTATCCGCAA-----ACCATACTTGGGAGATGAT-TTGCA----AAAGATGCTGTTTCTTAATCTACCTTACTCTCAAACTC--CTTGGCTGCCATTTT----------TTTTTACC------------TTGCTTTACTTAC-ATGAATAAAGTGAAGACAGGGAGGACCAGAATAAAGAAAGAAGGAGGAATCAAATTAATTTTGCTGCTTATTCCTACTTGGCCACCAAGATACAATA-GATGTCAAGGCTGTGAGTAGGACGAGGATTTATAGTCATTTCCATGAGTGGTGATACAC-----------------------------ATGGCCCGTGTGCCAAG-AGAGCTGG-------TTGGTCAATGAAAC---AGGACTTCCTG---TGCTCAGTGCTGAATAAGCTCACCAGCATCCAGCCT-GAGATGACGGGGGG------AAG--TCCAAGGGGCTTTGTCT-GTCACTTGCAATTA-CCAGGATCAACCAAGCTAAG---CTGCTTGTCCTGACTGCCGAAAAGTTCTCACCCCAAAGAA-TTTGGCCTTCCCCGATGCATGATGGAATCTTGCTCAGACATTTGAAGCTATTCTCAATGAGAAACAAACAAACAAAAAAAGGCGAGAaacaacaacaacaacaacaaAAAACAGATACAAAGTGGGATCCTT-------TCGTTT----ATTAGAAACTATTTCCACAAACTGAGCAATCTGGA------GACTTAAAAGTTCTGACA-C-GTGTGTGTAGGTCTGGCAAATCCTACTAGTTTAC i calJac3.chr12 C 0 C 0 s mm10.chr14 24084660 1176 + 124902244 CTGAGCATCGGAAGCTGAAGAGGAGGGTGGGGATGAGGCTGGGAGTAGAGGTGGA-----TGGAAGGCAGGTGGGCAGCTGGGCCAGG-AGAGGGATGGACAAGTACATCACACTACACTTAAGTGAAGC-GAAACTCCACATTCCCACT--------TGCAAATGCTTTCTAAGCAACCAGCT-A---AGAACACTCTTTGTCAAACCATCTTA------ATGACCTCATCTCACAAATGTGTGTGTGCGTGTGCGTG-------TTCTAACTTCTACCACTGAAGTATATTCACTGAAGTA--TATTTTGAGGGGATTGCATGCTTTGGAATATCCCTT-TTGAGCTT---GCTTGAATGCACATAATTA--CAGTTTGTACTGT-------GTACATTGTAGGAACGTCAGAGAAAAAGTCATCGCTGTCAAGG-------GTAACTCTGAAGTCCCACAAGGCTTAACAGCCTTTTAAA----CTTAC-AGCAAGCAGTAGG--TCACACAGTTCTTTTTATTaaaaacagaaacaaaaaaaaaaaaaaaccaaaaccaaCTGTAATCTTCCCCCAACACTTACCT----TAAAAGATGGT-CATCGCCCCTCAGAGACGGAATCTGCACCGCTGTAACTTTTACTCTCTTCTTGACTGTCTTTGA--------------TGCT----GTAGGAATTTTCTTTGACTTC-----ATAAATTGAAGAGACACTGAAC-------------------------AAACTAACTTGGCTGCTTAGTCCCACTTGGGCACGCACATACAGTAGGATGTGAAGGCCACAAATAGGA------TCTGTGGTCATATGTATGAATGGTCACTCTCCTCCCAACTCCGTTGTATTGATGGATAAGATGGCCCATCTGGCAAGAAGAACTGG-------TTTGCTTTTGGGTCCCTGGGACTCCCTACATCATCAACTGCTAGATATGCTCA----CATCCAGTCTCTAAATAAGGGATTG------TAGCTCCCCCAAGGTTTTGTCGAGTGACTTACTATT---TATTGTCAA--AGGGTCAGAACTCTCATGTCTTAATCACTAAAAAGGTCTCACCCCAAAGAACTCCCATCTTGCCCCTCTTCAGATGTA-----------ACACTTAAGGCTATCCTCAACCAGGAGCAGAAAA--------------GGATC--------------------TTGGTCATGTAATTAGGTCCCTAATGGAGTACTTA----AAAAGTGACTGAAACTTTCAACTGAAATAATTAAGTCAACTGAATGAGTGGCCATTGGG-CCCTCTATGTAGCTCTGGCAAGAGCCACTGGTTTAC i mm10.chr14 C 0 I 5614 s canFam3.chr4 27656149 1132 + 88276631 GCAAGCATCAGAAACTGAAGCAGGGGA----------AACA--AGTCGAGGTGGGCAGACAGAAGGA--GCA-----GCTGGGACCAG-GGAGGAATAGGCGACAACACCAAG--ATAT-----TAAACATAAACTCCCAGATTCACACTGGAAGACGTGT---TGT-----GGGCAGCAAGCTCGTCTAGAGCTATTTCTT-CAGG--GCCTTACAATTGAACAAGTGACCTtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtTTTTAACTTCTA--------------TCACTGAAGTGTATGTTTCAAT----TTCCTGGCTCTCAGATGAAGTTTCTTGAACCTTTAATGTGAATGGGTATAA-TA--CCTATTTTGATGT--CGCACGTGAACGTCTAGTATTTCAGATCAAAG-CAGCCACTGCTGAGG-------G-CCATCTGAAAT-GCACAGGGCTTGGTTTCCCTCTTAA----TTGCCAACCAAGCAGTGCA--TCTCACACTTTT-------------------------ACGAAAAAAA-----CTGTTGACCGCCTACCCTCAA-----AGCGTACCTCAGAGATGGTCATATC-TCCAGAGACGC----TATGAACTACCGTTACTCTGTGTCTC--CTTGGCTGCCTTTTG-----------------CTCT----TGAGTTTTCTTTGCCTCCCATGAATAAAGGGAAGTCAGGAAACGTCAGAAAAAAAGAAGTAGCAGCAATTGAGTTACTTTTGCCACTTGTTCCCACTCAGCTGCCAGGGTACAATATGATGCTGAGGCTGCAAGTG-----------TGCCGTC-CCTCCATAAAGGGCCGTGTCCC-------------ACACGGGCGGGC-CAGTGGCCCATGTGGCAAGAAGAGCTGGGTATGGCTTGGTCAG-GGCAC---GGGACTCCCTG---TGCCAAGTGCTGAGTCAGCTCA-CATCACTGGGCCT-GAGATAAGGGGAGGGGACTAAAG--CCCCAGGGGCTTTGCCT-GTAACTTCT--CTTGCCAGTATGAACCGAGTGAAG---CTTCTTGTCCTGCCCTGGGAAGAGTTCTCACACCGAAGTA-TCCTACTCTCCTCACTGCCAGG-AGAAGCTTGCTC--ACATTTAAAACTACTCCCAACTGGAAACGGGAAA-------------GAGGCC--------------------TCAGATACGAAGTAGGTTCTCT-------TCATTCATTGattaggaaaaaatccaacaaactgaaaaaa-taga------ggataaatg-cccatatagccccttacctaactc-agaaaatcctactattttcc i canFam3.chr4 C 0 C 0 a score=1074456.000000 s hg38.chr10_KI270825v1_alt 7291 299 + 188315 TCTCCTAGCTCAGATTCCTTTGTAAAAAGTCAGATGCTGCTGATGTTCA-TGAGGCTTCTCttctggcaccagggcagacaagacaacctgaagggctt-tctgcaacaaaatgcctagaaaatgttgggtgcaatttataaaacataattttaatgcatagctgagctcacaggaaggtaatggaaacc----------------------------------------cccaggagtcaga-aggccaaggggacagaactctggagaatgaagcataagtgcctgctg-tagctgccttga-----------aggtggaagggtatggtaggatggg----gctgttttaggaaa----------------- s panTro4.chr10 76377897 299 + 133524379 TCTCCTAGCTCAGATTCCTTTGTAAAAAGTCAGATGCTGCTGATGTTCA-TGAGGCTTCTCttctggcaccagggtagacaagacaacctgaagggctt-tctgcaacaaaatgcctagaaaatgttgggtgcaatttataaaacataattttaatgcatagctgagctcacaggaaggtaatggaaacc----------------------------------------cccaggagtcaga-aggccaaggggacagaactctggagaatgaagcataagtgcctgctg-tagctgccttga-----------aggtggaagggtatggtaggatggg----gctgttttaggaaa----------------- i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76045692 299 - 133410057 TCTCCTAGCTCAGATTCCTTTGTAAAAAGTCAGATGCTGCTGATGTTCA-TGAGGCTTCTCttctggcaccagggtagacaagacaacctgaagggctt-tctgcaacaaaatgcctagaaaatgttgggtgcaatttacaaaacataattttaatgcatagctgagctcacaggaaggtaatggaaacc----------------------------------------cccaggagtcaga-acaccaaggggacagaactctggagaatgaagcataagtgcctgctg-tagctgccttga-----------aggtggaagggtatggtaggacggg----actgttttaggaaa----------------- i ponAbe2.chr10 C 0 I 16 s nomLeu3.chr18 34987202 299 + 104879549 TCTCCTAGCTCAGATTCCTTTGTAAAAAGTCAGATGCTGCTGATGTTCA-TGAGGCTTCTCttctggcaccagggtagacaagacaacctgaagggctt-tctgcaacaaaatgcctagaaaatgttgggtgcaatttataaaacataattttaatgcacagctgagctcacaggaaggtaatggaaacc----------------------------------------cccaggagtcaga-acgccaaggggacagaactctggagaatgaagcctaagtgcctgctg-tagctgccttga-----------aggtggaagggtatggtaggacggg----gctgttttaggaaa----------------- i nomLeu3.chr18 C 0 I 16 s rheMac3.chr9 73781626 300 - 130959383 TCTCCTAGCTCAGATTCCTTTGTAAAAAGTCAGATGCTGCTGATGTTCA-TGAGGCTTCTCCtctggcaccagagtagacaagataacctgaagggcttatctgcaacaaaatgccaagaaaatgttgggtacaatttacaaaacataattttaatgcgtagctgagctcgcaggaaggtaatggaaacc----------------------------------------cccaggagtcaga-acgccaaggggacagaactctggagaatgaagcataagtgactgccg-tagctgccttga-----------aggtggaagggtatggtaggacggg----gctgttttaggaaa----------------- i rheMac3.chr9 C 0 I 16 s macFas5.chr9 75343836 300 - 133195287 TCTCCTAGCTCAGATTCCTTTGTAAAAAGTCAGATGCTGCTGATGTTCA-TGAGGCTTCTCCtctggcaccagagtagacaagataacctgaagggcttatctgcaacaaaatgccaagaaaatgttgggtacaatttacaaaacataattttaacgcgtagctgagctcgcaggaaggtaatggaaacc----------------------------------------cccaggagtcaga-acgccaaggggacagaactctggagaatgaagcataagtgactgccg-tagctgccttga-----------aggtggaagggtatggtaggacggg----gctgttttaggaaa----------------- i macFas5.chr9 C 0 I 16 s papAnu2.chr9 73207908 300 - 125196307 TCTCCTAGCTCAGATTCCTTTGTAAAAAGTCAGATGCTGCTGATGTTCA-TGAGGCTTCTCCTCTGGCACCAGAGTAGACAAGATAACCTGAAGGGCTTATCTGCAACAAAATGCCAAGAAAATGTTGGGTACAATTtacaaaacacaattttaatGCGTAGCTGAGCTCGCAGGAAGGTAATGGAAACC----------------------------------------CCCAGGAGTCAGA-ACGCCAAGGGGACAGAACTCTGGAGAATGAAGCATAAGTGACTGCCG-TAGCTGCCTTGA-----------AGGTAGAAGGGTATGGTAGGACGGG----GCTGTTTTAGGAAA----------------- i papAnu2.chr9 C 0 I 16 s chlSab2.chr9 72040276 300 - 125710982 TCTCCTAGCTCAGATTCCTTTGTAAAAAGTCAGATGCTGCTGATGTTCA-TGAGGCTTCTCCtctggcaccagagtagacaagataacctgaagggcttatctgcaacaaaatgccaagaaaatgttgggtacaatttacaaaacataattttaatgcgtagctgagctcgcaggaaggtaatggaaacc----------------------------------------cccaggagtcaga-acgccaaggggacagaactctggagaatgaagcataagtgactgccg-tagctgccttga-----------aggtggaagggtatggtaggatggg----gctgttttaggaaa----------------- i chlSab2.chr9 C 0 I 16 s calJac3.chr12 75502174 294 - 121768101 TCTCCTGGCTCAGATTCCTTTGTAAAAAGTCAGATGCTGCTGATGTTCA-TGAGGCTTCTCttcgggcaccagggtagacaagataacctgaa-----tatctacaacaaaatgcctgggaaatgttgggtacaacttgtaaaacataattttaatgcacagctgagctcacaggagggtaatggaaacc----------------------------------------cccaagagtcaga-aCGCCAAGGGGACAGACCTCTGGAGAAGGAAGCCTAAGTGGCCGCTG-GAGC-ACCTGGA-----------AGGTAGAAGTGTACGGTAGGATGGG----TCTGCTTTAAGAAG----------------- i calJac3.chr12 C 0 I 568 s mm10.chr14 24091450 357 + 124902244 TCCTTCAGTTTTGGGTCATTTTTCAACAGCCTGGTGCTCTTGTAACCCAGGGGGGCTGCTGTTCTGCCATGAGGGCAGGCATGGCAACCTGATACTGTC-TTTCTAACAAAACACTACAAAACATTGGGGTCTTGTTTaaacaacctaactttaatgcatagctgagcctgcaggaagataagagaatccacaACCACCATCACCACGACCACCCACCCCCACTAACCTACTCAGGAGCTAGATGTGAGAAGGAATGAAGACTATGGACAGTTCGTTGTAAGCAGCTGTTGACAGCTGCTAAAAAAAAAAGAGAGAGGGGGAGGGAGAGTGCAGGATAGGAGATGTCATTATGGAAGA----------------- i mm10.chr14 I 5614 I 14 s canFam3.chr4 27657281 302 + 88276631 ttttctgcttcagatcttttttccagaagtaaaatgctactgatGTCTA-TGAggcttctgttctggtactggggcagacaggataacctgaagagctc-cttgcagccaaacacctagaaaatactaggtactatctataaaatttccttttaatgtgtagtggaggttacaagaaggtaaaggaaatt----------------------------------------cccctgggccaca-gcaccaagagcacagaactct------------ataagcagctgtcg-ttgctgcct--a-----------tggtgggaaaatgtggtagcgtggg----gtcacgttttgcaatgcctggtcttcttata i canFam3.chr4 C 0 C 0 a score=353780.000000 s hg38.chr10_KI270825v1_alt 7590 106 + 188315 --tacacagggaaaagtgacagaaacctttggccttgcctatgggttgttggaactaagaaacccctcacacagaTACATAAATTTGGGATTATCTAGGAGCAACAca- s panTro4.chr10 76378196 106 + 133524379 --cacacagggaaaagtgacagaaacctttggccttgcctatgggttgttggaactaagaaacccctcacacagaTACATAAATTTGGGATTATCTAGGAGCAACAca- i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76046007 106 - 133410057 --cacacagggaaaagtgacagaaacctttggccttgcctatgggttgttggaactaagaAACCCCTCACACAGATACATAAATTTGGGATTATCTAGGAGCAACAca- i ponAbe2.chr10 I 16 C 0 s nomLeu3.chr18 34987517 106 + 104879549 --cacacagggaaaagtgacagaaacctttggccttgcctatcggttgttggaactaagaaacccctcacacagaTACATAAATTTGGGATTATCTAGGAGCAACAca- i nomLeu3.chr18 I 16 C 0 s rheMac3.chr9 73781942 106 - 130959383 --cacacagggaaaagtggcagaaacctttggccttgcctgcgggttgttggaactaagaaacccctcacacagaCACATAAATTGGGGATTATCTAGGAGCAACAca- i rheMac3.chr9 I 16 C 0 s macFas5.chr9 75344152 106 - 133195287 --cacacagggaaaagtggcagaaacctttggccttgcctgcgggttgttggaactaagaaacccctcacacagaCACATAAATTGGGGATTATCTAGGAGCAACAca- i macFas5.chr9 I 16 C 0 s papAnu2.chr9 73208224 106 - 125196307 --CACACAGGGAAAAGTGGCAGAAACCTTTGGCCTTGCCTGCGGGTTGTTGGAACTAAGAAACCCCTCACACAGACACATAAATTGGGGATTATCTAGGAGCAACACA- i papAnu2.chr9 I 16 C 0 s chlSab2.chr9 72040592 106 - 125710982 --cacacagggaaaagtggcagaaacctttggccttgcctgcgggttgttggaactaagaaacccctcacacagaCACATAAATTGGGGATTATCTAGGAGCAACAGa- i chlSab2.chr9 I 16 C 0 s calJac3.chr12 75503036 106 - 121768101 --CTCTCCAGGAAAAGCGACAGAAACCTTAGACATTGGTTACGGGTTGTTGGAATTAAGAAACCCTTCACACAGATACGTAAATTTGGGTCTATCCAAGAACAAAAcg- i calJac3.chr12 I 568 C 0 s mm10.chr14 24091821 103 + 124902244 --GACCCAGAGAGAA--AACTAAAGTCTCCTGCA-TGGCTGAGGCCTGTTGGAATGAAGATGTTCCTCATATAAACAAAAGAAATTGGAACTCAATCAAAGCAATACT- i mm10.chr14 I 14 I 87 s canFam3.chr4 27657583 93 + 88276631 tccacacgtggaggg------gaaatcgtgggctt--gttagggggtgttgggagtaagacactcctcacaca--------aagttggggttctctaaaagcaatactt i canFam3.chr4 C 0 C 0 a score=208255.000000 s hg38.chr10_KI270825v1_alt 7696 74 + 188315 gcaccttgggagatt-gaggcgggaggactgcttgaggccaggagcttaagaccagcctgggcaacatagcaaaa s panTro4.chr10 76378302 75 + 133524379 gcaccttgggagatttgaggcgggaggaccgcttgaggccaggagcttaagaccagcctgggcaacatagcaaaa i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76046113 74 - 133410057 gcaacttgggagatt-gaggcgggaggactgcttgaggccaggagcttaagaccagcctgtgcaacatagcaaaa i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34987623 74 + 104879549 gcaccttgggagatt-gaggcgggaggactgcttgaggccaggagcttaaaaccagcctgggcaacataacaaaa i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73782048 74 - 130959383 gcaccttgggagatt-gaggtgggaggactgcttgaggccaggagtttaagaccagcctgggcaacatagcaaaa i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75344258 74 - 133195287 gcaccttgggagatt-gaggtgggaggactgcttgaggccaggagcttaagaccagcctgggcaacatagcaaaa i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73208330 74 - 125196307 GCaccttgggagatt-gaggtgggaggactgcttgaggccaggagcttaagaccagcctgggcaacatagcaaaa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72040698 73 - 125710982 gcaccttgggagatt-gaggtgggaggactgcttgaggccaggagcttaagaccagcctgggcaaccta-caaaa i chlSab2.chr9 C 0 I 12 s calJac3.chr12 75503142 74 - 121768101 gcgccttgggaatcc-gacacaggagggtcgctcgaggtccggagctcaagaccagcctggccaacgttgcaaaa i calJac3.chr12 C 0 C 0 s canFam3.chr4 27657676 58 + 88276631 acccccagatatagt-aaaattagacaa------------aggaatctaagtctgggtt---ctgcatagaaaa- i canFam3.chr4 C 0 C 0 e mm10.chr14 24091924 87 + 124902244 I a score=40739.000000 s hg38.chr10_KI270825v1_alt 7770 29 + 188315 ccgtatctctgcaaaaaaaaa-attttttt s panTro4.chr10 76378377 29 + 133524379 ccgtatctccgcaaaaaaaaa-tttttttt i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76046187 30 - 133410057 ccctatctctgcaaaaaaaaattttttttt i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34987697 29 + 104879549 ccctatctctgccaaaaaaaa-attttttt i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73782122 24 - 130959383 ccctatctctacaaaa------gttttttt i rheMac3.chr9 C 0 I 4 s macFas5.chr9 75344332 24 - 133195287 ccctatctctacaaaa------gttttttt i macFas5.chr9 C 0 I 4 s papAnu2.chr9 73208404 24 - 125196307 ccctatctctacaaaa------gttttttt i papAnu2.chr9 C 0 I 4 s calJac3.chr12 75503216 24 - 121768101 ccctatctttacaaaa------aatttttt i calJac3.chr12 C 0 I 3 s canFam3.chr4 27657734 19 + 88276631 --gtctccctaggaaa------ttttt--- i canFam3.chr4 C 0 C 0 e mm10.chr14 24091924 87 + 124902244 I e chlSab2.chr9 72040771 12 - 125710982 I a score=210864.000000 s hg38.chr10_KI270825v1_alt 7799 75 + 188315 aattagccaggcatggtgtgacatgatacttgagtagttccagctactcaagaggctgagctgggaggatTAACC s panTro4.chr10 76378406 75 + 133524379 aattagccaggcatggtgtgacatgatacttgagtagttccagctactcaagaggctgagctgggaggatTAACC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76046217 75 - 133410057 aattagccaggcatcgtgtgaaatgacacttgagtagtttcagctactcaagaggctgagctgggaggatTAACC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34987726 75 + 104879549 aattagccaggcatggtgtgacatgatacttgagtagttccagctactcaagaggctgagctgggaggatTAACC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73782150 75 - 130959383 aattagccaggcatggtgtcacatgatacttgagtagttccagttactcaagaggctgagctgggaggatTAACC i rheMac3.chr9 I 4 C 0 s macFas5.chr9 75344360 75 - 133195287 aattagccaggcatggtgtcacatgatacttgagtagttccagttactcaagaggctgagctgggaggatTAACC i macFas5.chr9 I 4 C 0 s papAnu2.chr9 73208432 75 - 125196307 aattagccaggcatggtgtcacatgatACTTgagtagttccagttactcaagaggctgagctgggaggattaaCC i papAnu2.chr9 I 4 C 0 s chlSab2.chr9 72040783 75 - 125710982 aattagccaggcatggtgtcacatgatacttgagtagttccagttactcaagaggctgagctgggaggatTAACC i chlSab2.chr9 I 12 C 0 s calJac3.chr12 75503243 75 - 121768101 aattagccagatacggtgtcacacactacttgcatagttccagctacttgagaggctgaggtgggaggatTAATC i calJac3.chr12 I 3 C 0 s canFam3.chr4 27657753 4 + 88276631 aatt----------------------------------------------------------------------- i canFam3.chr4 C 0 C 0 e mm10.chr14 24091924 87 + 124902244 I a score=1804152.000000 s hg38.chr10_KI270825v1_alt 7874 525 + 188315 AA-TGTCTAGGATTCTCAGGGGTTCTGAAG------TTCAAATATA-CACTGTCCTTTTATTTTGGGAACTCAAAAAATTGTCTCTAAGCCTATACTATC------------------------------CCTCAGTGACCTTGCATAAGCAAATCACAAATGTC--TACAGGACCCATC--CACAAGCCAGGCCTCACAGGAGTCCCACTGATACAGCCCTGCTAAAGCT-GAGTGCACAGTCC----AAGAATTAATCCATTTA----AACAATCTACCCCTTGGCCTACA----TTTTCTCCTTGCTCCTTCCAGCTACAAGTTA-CGCCGCT-CTGTGATACAAACTGTTCCTCTC-ACGCAGCAGAATTAGAA-CCGAAGGACTGTTTTCCCTTCCTGTATCCT-------ATTTCTTGCCTCCTTGAGAGCAGTCCCT-AAG------TTCCTTATAGCTCCCATGCATTGT----TTATACTTAA--AATACACCACGTGCTCCCACAAATAATACACAC--TGGTTTGCAACCTCAAGCTCACaggtgatgggaataatgccca-cgataaaagcctgtgagccagctcacgtcagaat s panTro4.chr10 76378481 526 + 133524379 AA-TGTCTAGGACTCTCAGGGGTTTTGAAG------TTCAAATATAACACTGCCCTTTTATTTTGGGAACTCAAaaaattgtctctaagcctatactatc------------------------------cctcggtgaccttgcataagcaaatcacaaatgtc--tacaggacccatc--cacaagccaggcctcacaggagtcccactgatacagccctgctaaagct-gagtgcacagtcc----aagaattaATCCATTTA----AACAATCTACCCCTTGGCCTACA----TTTTCTCCCTGCTCCTTCCAGCTACAAGTTA-CGCCGCT-CTGTGATACAAACTGTTCCTCTC-ACGCAGCAGAATTAGAA-CCGAAGGACTGTTTTCCCTTCCTGTATCCT-------ATTTCTTGCCTCCTTGAGAGCAGTCCCT-AAG------TTCCTTATAGCTCCCATGCATTGT----TTATACTTAA--AATACACCACGTGCTCCCACAAATAATACACAC--TGGTTTGCAACCTCAAGCTCACAGGTGATGGGAATAATGCCCA-CGATAAAAGCCTGTGagccagctcacgtcagaat i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76046292 525 - 133410057 AA-TGTCTAGGActctcaggggttttgaag------ttcaaatata-cactatccttttattttgggaactcaaaaaattgtctctaagcctatactatc------------------------------cctcggtgaccttgcataagcaaatcacaaatgtc--tataggacccatc--cacaagccaggcctcacaggagtcccacagatacagccctgctaaagct-gagtgcacagtcc----aagaattaATCCATTTA----AACAATCTACCCCTTGGCCTACA----TTTTCTCCCTGCTCCTTCCAGCTACAAGTTA-CGCCGCT-CTGTGATACAAACTGTTCCTCTC-ACGCAGCAGAATTAGAA-CCGAAGGACTGTTTTCCCTTCCTGTATCCT-------ATTTCTTGCCTCCTTGAGAGCAGTCCCT-AAG------TTCCTTATAGCTCCCATGCATTGT----TTATACTTAA--AATACACCACGTGCTCCCACAAATAATACATGC--TGGTTTGCaacctcaagctcacaggtgatgagaataatgccca-cgatgaaagcctgtgagccagctcacgtcagaat i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34987801 525 + 104879549 AA-TGTCTAGGACTCTCAGGGGTTTTGAAG------TTCAAATATA-CACTATCCTTTTATTTTGGGAACTCAAaaaattgtctctaagcctatactatc------------------------------cctcggtgaccttgcataagcaaatcacaaatgtc--tacaggacccatc--cacaagccaggcctcacgggagtcccacagatacagccctgctaaagct-gagtgcacagtcc----aagaattacTCCATTTA----AACAATCTACCCCTTGGCCTACA----TTTTCTTCCTGCTCCTTCCAGCTACAAGTTA-CCCTGCT-CTGTGATACAAACTGTTCCTCTC-ACACAGCAGAATTAGAA-CCGAAGGACTGTTTTCTCTTCCTGTATCCT-------ATTCCTTGCCTCCTTGAGAGCAGTCCCT-AAG------TTCCTTATAGCTCCCATGCATTGT----TTATACTTAA--AATACACCGCATGCTCCCACAAATAGTACATGC--TGGTTTGCAACCTCAAGCTCACAGGTGATGGGAATGATGCCCA-CGATGAAAGCCTGTGagccagctcacgtcagaat i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73782225 525 - 130959383 AA-TGTCTAGGActcaca-gggttttgaag------tttaaatata-cactacccttctattttgggaactcaaaaaattgtctctaagcctatactatc------------------------------cctaggtgaccttgcacaagcaaatcacaaatgtc--tacaggacccatc--cacaagccaggcctcacaggagtcccacagatacagccttgctaaagcttgagtgcacagtcc----aagaattaATCCATTTA----AACAATCTACCCCTTGGCCTACA----TTTTCTCCCCACTCTTTCCGGTTACAAGTTA-CCCTACC-CTGTGATACAAACTGTTCCTCTC-ATGCAGCAGAATTAGAC-CCAAAGTACTGTTTTCCCTTCCTGTATCCT-------ATTCCTTGCCTCCTTGACAGCAGTTCCT-AAG------TTCCTTATAGCTCCCCTGCATTGT----TTATACTTAA--AATACACCGCGTGCTCCCACAAATAATACACGC--TGGTTTGCAACCTCAAGCTCACAGGTGATGGGAATAATGCCCA-CGATGAAAGCCTGTGAGCCAGCTCACGTCAGAAT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75344435 525 - 133195287 AA-TGTCTAGGActcaca-gggttttgaag------tttaaatata-cactacccttctattttgggaactcaaaaaattgtctctaagcctatactatc------------------------------cctaggtgaccttgcacaagcaaatcacaaatgtc--tacaggacccatc--cacaagccaggcctcacaggagtcccacagatacagccttgctaaagcttgagtgcacagtcc----aagaattaATCCATTTA----AACAATCTACCCCTTGGCCTACA----TTTTCTCCCCACTCTTTCCGGTTACAAGTTA-CCCTACC-CTGTGATACAAACTGTTCCTCTC-ATGCAGCAGAATTAGAC-CCAAAGTACTGTTTTCCCTTCCTGTATCCT-------ATTCCTTGCCTCCTTGACAGCAGTTCCT-AAG------TTCCTTATAGCTCCCCTGCATTGT----TTATACTTAA--AATACACCGCGTGCTCCCACAAATAATACACGC--TGGTTTGCAACCTCAAGCTCACAGGTGATGGGAATAATGCCCA-CGATGAAAGCCTGTGAGCCAGCTCACGTCAGAAT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73208507 525 - 125196307 AA-TGTCTAGGACTCACA-GGGTTTTGAAG------TTTAAATATA-CATTACCCTTCTATTTTGGGAACTCAAAAAATTGTCTCTAAGCCTAGACTATC------------------------------CCTAGGTGACCTTGCACAAGCAAATCACAAATGTC--TACAGGACCCATC--CACAAGCCAGGCCTCACAGGAGTCCCACAGATACAGCCTTGCTAAAGCTTGAGCGCACAGTCC----AAGAATTAATCCATTTA----AACAATCTACCCCTTGGCCTACA----TTTTCTCACCACTCTTTCCAGTTACAAGTTA-CCCTACC-CTGTGATACAAACTATTTCTCTC-ATGCAGCAGAATTAGAC-CCAAAGTACTGTTTTCCCTTCCTGTATCCT-------ATTCCTTGCCTCCTTGACAGCAGTTCCT-AAG------TTCCTTATAGCTCCCCTGCATTGT----TTATTCTTAA--AATACACCACGTGCTCCCACAAATAATACATGC--TGGTTTGCAACCTCAAGCTCACAGGTGATGGGAATAATGCCCA-CGATGAAAGCCTGTGAGCCAGCTCACGTCAGAAT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72040858 526 - 125710982 AA-TGTCTAGGActcacaggggttttgaag------tttaaatata-cactacccttctattttgggaactcaaaaaattgtctctaagcctatactatc------------------------------cctaggtgaccttgcataagcaaatcacaaatgtc--tacaggacccatc--cacaagccaggcctcacaggagtcccacagacacagccctgctaaagctcgagcgcacagtcc----aagaattaATCCATTTA----AACAATCTACCCCTTGGCCTACA----TTTTCTCCCCGCTCTTTCCAGTTACAAGTTA-CCCTACC-CTGTGATACAAACTGTTCCTCTC-ATGCAGCAGAATTAGAC-CCGAAGTACTGTTTTCCCTTCCTGTATCCT-------ATTCCTTGCCTCCTTGACAGCAGTTCCT-AAG------TTCCTTATAGCTCCGCTGCATTGT----TTATACTTAA--AATACACCGCGTGCTCCCACAAATAATGCACGC--TGGTTTGCAACCTCAAGCTCACAGGTGATGGGAATAATGCCCA-CGATGAAAGCCTGTGAGCCAGCTCACGTCAGAAT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75503318 553 - 121768101 AATTATCTAGGACTCACAGAGGTTTTGAAGtttaaatttaaatata-tattaCCCTTATATTTTGGGAATTCAAAATATTGCCTCTAAACCTAAAGTATCTCTGGGTGACCTTGTATAAGCAAATCACAAcctgggtgaccttgtataagcaaatcacaaatgtc--tgcaggacctatc--caaaagccaggcctcacaggagtcccacagataaagcgctgctaaagct-gagcacacactcc----aagaATCTATCCATTTA----AACAATCCACCCCTCAGCCCACA----TTTTCTCCTTGCTCCTTCCAGCTACATGTTA-CCCCACT-CCACGATACAAACTGCTCCTCTC-CTGCAGCAGAATTAGAC-CCAAAGAACTGCTGTCCCTTCCTGTATCCT-------ATTCCTTGCCTCCTTGAGAGCAGCCACT-AAG------TTCCTTAGAGCTCCCATGGATTGC----TTATACTTAA--AATACACCCCATGCTCCCACAG---------GC--TGGTTTACAACCTCAGGCGCACAGGCGATGGGAATGACACCCA-CGACAAAAGCCTGAGGGCCAGCTCACGTCAGAAT i calJac3.chr12 C 0 C 0 s mm10.chr14 24092011 476 + 124902244 ag-tgtctatga-------aagtttggaat------tttaatacta-c-ctagccttatctattggga-----------tgtctctgaggttataatatt------------------------------cctagagagccagatataagagaa-cagaaacctc--tctagaacccacctatatatacctggtcttacaggagtcccacagacaaagtccAAGGAGGGAA-AAGCATATTATCC----AAG------------------------CTA-CCCTTGGTTGATA----TTTTCTTCCTA-----------TATAGATAC-TGTTGCT----TAATACTGAGCACTCATGTC-ACAAAGGAGAATTCCACTTCTAAGAATTGTATTCCCTTCTT---TCCTGAGAGAGGCCACTGGTTTCTTT----GCCATTCCC-AGGTGGTTTTTGTTTTTGGCTTTGGTGTTTTGTTTTGTTGCACTTGGGTACCACACAGTGTCATTACGTAAGCAACCGACTC--TCCTTTGCAGTCTTGTGC---------ATCTTGATTCTTCTCA-CAATCAAAGCCCATGAGCCAACTCACATCAGAGT i mm10.chr14 I 87 C 0 s canFam3.chr4 27657757 542 + 88276631 aa-tgtctaggactccta--ggctttggag------tttaaatata-tattccactcatatgtgaggaactaaaaaaattgacactgagttggtgatatc------------------------------cttaggttacctggcataagcaaatgaaatatctctgtacaggacccacc--cagaggtcagggctcacaggggtcccacagataaaactcttctaagaat-gagctcatagtcccaagaggtaataatatatttaaaggaaaaattcaccCCTTGGCTTGTATTTGTTTTTTCTCCACTCTTTTCAGCTACAAGATACCCCTGCTACAATGATACCAACTGTTCCTATTAACGCAGCAGAACGAGGC-CCTAAGAACTGTGTGCCCCTC---TATCTT-------GTACCTTCCCTCCCTGAGAGTAAACACTGAAA------TTCCTGATAAATCCCACGTATTCTT---TTATATTTAT--ACTACACTGAGTGATTCCATAAGTAATATATGCCTTTGTTTGCAACCTCAAGCTTACAGATTAGGAAAACCATGCTCAGTTACAAAGGCCTGTGAGCCAGCTAATGTCAGAAt i canFam3.chr4 C 0 I 626 a score=55434.000000 s hg38.chr10_KI270825v1_alt 8399 18 + 188315 caagactagggtacaagt s panTro4.chr10 76379007 18 + 133524379 caagactagggtacaagt i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76046817 18 - 133410057 caagactagggtacaagt i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34988326 18 + 104879549 caagactagggtacaagt i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73782750 18 - 130959383 CAAGACGAGGGTACAAGT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75344960 18 - 133195287 CAAGACGAGGGTACAAGT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73209032 18 - 125196307 CAAGACGAGGATACAAGT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72041384 18 - 125710982 CAAGACGAGGGTACAAGT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75503871 18 - 121768101 GAAGACTAGGGGACAAGT i calJac3.chr12 C 0 C 0 s mm10.chr14 24092487 15 + 124902244 CAAGACTCAGGAACA--- i mm10.chr14 C 0 C 0 e canFam3.chr4 27658299 626 + 88276631 I a score=838011.000000 s hg38.chr10_KI270825v1_alt 8417 249 + 188315 cctcaggctcctggctcctgctctttccacttcactattttgcttctctTTTTCTTGCAGCGAGTATTGGCAATAGTAAAATGAGTC--CCACTTCTCTGATAACTCACCAACCATGTTGGAGAGAAAGTATCTGAGAAG-------TCAG-----------------------TTGAAACAACCACCACAACAAAAACTAATTCCCAAGACAGATGATCCTTGAGTGGATAATTGCCACTTGATTGTTTATTAGAGCCATGGCTCCTGTACGGGGACTGG s panTro4.chr10 76379025 249 + 133524379 cctcaggctcctggctcctgctctttccacttcactattttgcTTCTCTCTTTCTTGCAGCGAGTATTGGCAATAGTAAAATGAGTC--CCACTTCTCTGATTACTCACCAACCATGTTGGAGAGAAAGTATCTGAGAAG-------TCAG-----------------------TTGAAACAACCACCACAACAAAAACTAATTCCCAAGACAGATGATCCTTGAATGGATAATTGCCACTTGATTGTTTATTAGAGCCAGGGCTCCTGTACGGGGACTGG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76046835 248 - 133410057 ccttgggctcctggctcctgctctttccacttcactattttgcttctctTTTTCTTGCAGCGAGTATTGGCAATAGTAAAATGAGTC--CCACTTCTCTGGTAACTCACAAACCACGTTGGAGAGAAAGTATCTGAGAAG-------TCAG-----------------------TTGAAACAACCACCACAACAAAAACTAATTCCCAAGACAGATGATCCTTGAATGGATAATTGCCACTTGATTGTTTATTAGAGCCATGGCTCCTGTAC-AGGACTGG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34988344 248 + 104879549 cctcgggctcctgactcctgctctttccacttcactattttgcttcTCTCTTTCTTGCAGCAAGTATTGGCAATAGTAAAATGAGTC--CCACTTCTCTGATAACTCACCAACCACGTTGGAGAAAAAGTATCTGAGAAG-------TCAG-----------------------TTGAAACAACCACCACAACAAAAACTAATTCCCAAGACAGATGATCCTTGAATGGATAATTGCCACTTGATTGTTTATTAGAAACATGGCTTCTGTAC-GGGACTGG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73782768 244 - 130959383 CCTCGGGCTCCTGGCTCCTGCTCTTTCCACTTCACTATTTTGCTTCTC----TCTTGCAGCCAGTATTGGCAATAGTAAAATGAGTC--TCACTTCTCCGATAACTCACCAACCACGTTGGAGAGAAAGTATCTGAGAAG-------TCAG-----------------------TTGAAACAACCACCACAACAAAAACTAATTGCCAAGACAGATGATCCTTGAATGGATAATTGCCACTTGATTGTTTATTAGAGCCATGGCTCTTGTAT-GAGACTGG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75344978 244 - 133195287 CCTCGGGCTCCTGGCTCCTGCTCTTTCCACTTCACTATTTTGCTTCTC----TCTTGCAGCCAGTATTGGCAATAGTAAAATGAGTC--TCACTTCTCCGATAACTCACCAACCACGTTGGAGAGAAAGTATCTGAGAAG-------TCAG-----------------------TTGAAACAACCACCACAACAAAAACTAATTGCCAAGACAGATGATCCTTGAATGGATAATTGCCACTTGATTGTTTATTAGAGCCATGGCTCTTGTAT-GAGACTGG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73209050 244 - 125196307 CCTCGGGCTCCTGGCTCCTGCTCTTTCCACTTCACTATTTTGCTTCTC----TCTTGCAGCCAGTATTGACAATAGTAAAATGAGTC--TCACTTCTCCGATAACTCACCAACCACGTTGGAGAGAAAGTATCTGAGAAG-------TCAG-----------------------TTGaaacaaccaccacaacaaaaactAATTGCCAAGACAGATGATCCTTGAATGGATAATTGCCACTTGATTGTTTATTAGAGCCATGGCTCTTGTAC-GAGACTGG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72041402 244 - 125710982 CCTCGGGCTCCTGGCTCCCGCTCTTTCCACTTCACTATTTTGCTTCTC----TCTTGCAGCCAGTATTGGCAATAGTAAAATGAGTC--TCACTTCTCCAATAACTCACCAACCACGTTGGCGAGAAAGTATCTGAGAAG-------TCAG-----------------------ATGAAACAACCACCACAACAAAAACTAATTCCCAAGACAGATGATCCTTGAATGGATAATTGCCACTTGAGTGTTTATTACAGCCATGGCTCTTGTAT-GGGACTGG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75503889 240 - 121768101 CCTCAGGCTCCTGGCTCTGACTCTTTCCACTTCACTATTCTGCTTCTCTCTTTCTTGCCGTCAGTATTGGCACTTGTAAGATGAG--------TTTTCTGATAGTTC-CCAACCACGTTGGAGAGAAAGGATCTGAGAAG-------TCAG-----------------------TTGAAACAA-CACAACAACAAAAACTAATTCCCCAGACAGATGTTCTGCCAATGGGTGATTGGCATTTGATTGTGTATTAGAGCCATGGCTCTTGTAA-GCAGCTGG i calJac3.chr12 C 0 C 0 s mm10.chr14 24092502 235 + 124902244 -----GTCTCCTGGAGCCTGCTCTTATgactta---tttttgcttctgtctttctttcagccaacattggcaatt---catttagccatctgcttctctgacaggacaccaactgtgtctgagagaaagcatctggggagaagccgatctg-----------------------tttaa-----------agctatgattgatgcccaagacagataatgcttcaaaggatggttatcatttgactgCTTGTTGGATCTATGGTTCAGGTAG-AGAACCTG i mm10.chr14 C 0 I 41 s canFam3.chr4 27658925 258 + 88276631 cccagggatcccCCATCCTACCCTTTGTAATTCATCATTTTGCTTCAGTC--CCTTGCAGCCAAGGTT---------AAAACTAGTC--TCACTTCTCTGATACTATGCCAACAATATTTGAGAGAAAGCA-CCGAGAAG-------TCAATGTGtttttatttttatttatttttCAATGTGTTTTTAAAAGTATGACTAGTTCCCAAGACAAATGATCCCCGATTGGATGATTGTCACTTGACTGTCCATTAGAG-CATGGTTGATGTAG-AGAATTGG i canFam3.chr4 I 626 C 0 a score=201693.000000 s hg38.chr10_KI270825v1_alt 8666 59 + 188315 TGAGGGCGGGTGTTGGGATTACCTTTCAAAGGGCCATTCAGAGGGGAAAAGCTACCTGT s panTro4.chr10 76379274 59 + 133524379 TGAGGGCGGGTGTTGGGATTACCTTTCAAAGGGCCATTCAGAGGGGAAAAGCTACCTGT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76047083 59 - 133410057 TGAGGGCGGGTGTTGGGATTACCTTTCAAAGGGCCATTCAGAGGGGAAAAGCTACCTGT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34988592 59 + 104879549 TGAGGGCAGGTGTTGGGATTACCTTTCAAAGGGCCATTCAGAGGGGAAAAGCTACCTGT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73783012 59 - 130959383 TGAGGGCAGGTGTCGGGATTACCTTTCAAAGGGTCATTCAGAGGGGAAAAGCTACCTGT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75345222 59 - 133195287 TGAGGGCAGGTGTCGGGATTACCTTTCAAAGGGTCATTCAGAGGGGAAAAGCTACCTGT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73209294 59 - 125196307 TGAGGGCAGGTGTCGGGATTACCTTTCAAAGGGTCATTCAGAGGGGAAAAGCTACCTGT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72041646 59 - 125710982 TGAGGGCAGGTGTCGGGATTACCTTTCAAAGGGCCATTCAGAGGGGAAAAGCTACCTGT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75504129 58 - 121768101 GGAGGG-GTCTGTGGGGATTACCTTTCCAAGGGCCATTCAGAGGGGAAAAGCTACCTGT i calJac3.chr12 C 0 C 0 s canFam3.chr4 27659183 56 + 88276631 -GGAGGGGTGTGTCGGGATTACAATTT-GAGGTCCACTCAGAGGGG-AAAGCCCCATGT i canFam3.chr4 C 0 C 0 e mm10.chr14 24092737 41 + 124902244 I a score=236734.000000 s hg38.chr10_KI270825v1_alt 8725 69 + 188315 GCTCAAAAACAACCAATG-AGGGTCTCTTGGATTACCAGGAGGC-TGAAAAGCCCAGAG--ATGGTGGGCACA s panTro4.chr10 76379333 69 + 133524379 GCTCAAAAACAACCAATG-AGGGTCTCTTGGATTACCAGGAGGC-TGAAAAGCCCAGAG--AGGGTGGGCACG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76047142 69 - 133410057 GCTCAAAAACAACCAATG-AGGGTCTCTTGAATTACCAGGAAGC-TGAAAAGCCCAGAG--ATGGTGGGCACG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34988651 69 + 104879549 GCTCAAAAACAACCAGTG-AGGGTCTCTTGAATTACCAGGAAGC-TGAAAAGCCCAGAG--ATGGCGGGCACA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73783071 69 - 130959383 GCTCAAAAACAACCAATG-AGAGTCTCTTGAATCACCAGGAAGC-TGAAAAGCCCAGAG--AATGTGGGCACG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75345281 69 - 133195287 GCTCAAAAACAACCAATG-AGAGTCTCTTGAATCACCAGGAAGC-TGAAAAGCCCAGAG--AGTGTGGGCACG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73209353 69 - 125196307 gctcaaaaacaagcaatg-agagTCTCTTGAATCACCAGGAAGC-TGAAAAGTCCAGAG--AGTGTGGGCACG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72041705 69 - 125710982 GCTCCAAAACAACCAATG-AGAGTCTCTTGAATCACCAGGAAGC-TGAAAAGCCCAGAG--AGTGTGGGCACG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75504187 71 - 121768101 GCTCAAAATCAACCAATG-AGGATCTCCTGAATCACCAGGAAGC-CAAAGAGCCCAGGGATAGGGAGGGCATG i calJac3.chr12 C 0 C 0 s mm10.chr14 24092778 69 + 124902244 GGTAAAAAAGGGTCACTG-AGAATCTCTTACCTCACCTAGAATC-TGAAAAGCCCAAGA--ATGGTGAACATA i mm10.chr14 I 41 I 76 s canFam3.chr4 27659239 68 + 88276631 -GATAGAATGAGCCAGTGAAGAATCTCCTAAGTCACGTGGAAGCTTGAAAAGCCCAGGA--GTGGTGGGTG-- i canFam3.chr4 C 0 C 0 a score=132281.000000 s hg38.chr10_KI270825v1_alt 8794 48 + 188315 GTGAAAGGTTGGGGCAGT-GGG--GCCAAAGACATAAA-TAAAGGACTCTGT s panTro4.chr10 76379402 48 + 133524379 GTGAAAGGTTGGGGCAGT-GGG--GCCAAAGACATAAA-TAAAGGACTCTGT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76047211 48 - 133410057 GTGAAAGGTTGGGGCAGT-GGG--GCCAAAGACATAAA-TAAAGGACTCTGT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34988720 48 + 104879549 GTGAAAGGCTGGGGCAGT-GGG--GCCAAAGACATAAA-TAAAGGACTCTGT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73783140 46 - 130959383 GTGAAAGGTTGGGGCAGT-GGG--GCCAATGACATAAA-TAAAGGA--CTGT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75345350 46 - 133195287 GTGAAAGGTTGGGGCAGT-GGG--GCCAATGACATAAA-TAAAGGA--CTGT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73209422 46 - 125196307 GTGAAAGGCTGGGGCAGT-GGG--GCCAATGACATAAA-TAAAGGA--CTGT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72041774 46 - 125710982 GTGAAAGGTTGGGGCAGT-GGG--GCCAATGACATAAA-TAAAGGA--CTGT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75504258 43 - 121768101 GTGAAAGGTTGGGGGAGTAGGG--GACAACAGC----A-TAAAGGA--CTCT i calJac3.chr12 C 0 C 0 s canFam3.chr4 27659307 47 + 88276631 GTGGAA----GGAGCGGC-GGGAAGAGGATGGCATAAAGTCAAGGACTCTGT i canFam3.chr4 C 0 C 0 e mm10.chr14 24092847 76 + 124902244 I a score=2082898.000000 s hg38.chr10_KI270825v1_alt 8842 651 + 188315 GTTTTAGGACTCTAGGAGCTCATCACTAAACAAAGTGCATACTCC---ACACTCCCTGCAGAGGCTG--TGTTGC-------CGTCTGCTGTGTGAGTGAAGGTGACAGCTCATCCCGCTAGCATCAGCAccaccagattgctgtcaggatctc--gagggcaaggcccatgtctgattcaataacc-tgtattctgagcactcag----aagagagcttggcacactgtca--gtgctccctaaagaagttaaatggatgCTGCATAACCAGGGCAGCCCAGCAGCGTCGGTCCAGAGACAAGGGAGTGACACCTGCT-CCCCGACGCAGTATATTCCGTACA-CCACAGCTCTGAATGTCCATGTTCAACTCATGCGGTGGTGGGGAGG--AGA----TGAGAGAGACCTGAGACACGAGGCACCTCTGAATGATCCCCCCACG-------GCCCACAGGGCTGGCAGCCCCCTAGGAGACCCTGGAA--TGGACT----------CGCGGACAGCAGCCACCTATCTCATGG----CTCACACGTCCCCGCCCTTCAGCTTATGTTGCTTCCCTGCTCTTTCCTGCTAAAGTGGCCCC-TGCTGAATGCCGC--CAGCCA------CG-GGGTCATGCAGCTTCCCTCCTGAGCCTGATCCACTGAGGTTTCCACATGTGTAGTCAGGGGCTTTGCTATGA---CTGAGCTGA s panTro4.chr10 76379450 651 + 133524379 GTTTTAGGACTCTAGGAGCTCATCACTAAACAAAGTGCATACTCC---ACACTCCCTGCAGAGGCTG--TGTTGC-------CGTCTGCTGTGTGAGTGAAGGTGACAGCTCATCCCGCTAGCATCAGCAccaccagattgctgtcaggatctc--gagggcaaggcccatgtctgattcaataacc-tgtattctgagcactcag----aagagagcttggcacactgtca--gtgctccctaaagaagttaaatggatgCTGCATAACCAGGGCAGCCCAGCAGCGTCAGTCCAGAGACAAGGGAGTGACACCTGCT-CCCCGACGCAGTATATTCCGTACA-CCACAGCTCTGAATGTCCATGTTCAATTCATGCAGTGGTGGGGAGG--AGA----CGAGAGAGACCTGAGACACGGGGCACCTCTGAATGATCCCCCCACA-------GCCCACAGGGCTGGCAGCCCCCTAGGAGACCCTGGAA--TGGACT----------CGCGGACAGCAGCCACCTATCTCATGG----CTCACACGTCCCCGCCCTTCAGCTTATGTTGCTTCCCTGCTCTTTCCTGCTAAAGTGGCCCC-TGCTGAATGCCGC--CAGCCA------CG-GGGTCATGCAGCTTCCCTCCTGAGCCTGATCCACTGAGGTTTCCACATGTGTAGTCAGGGGCTTTGCTATGA---CTGAGCTGA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76047259 645 - 133410057 GTTTTAGGACTCTAGGAGTTCATCACTAAACAAAGTGCATACTCC---ACACTCCCTGCAGAGGCTG--TGTTGC-------CGTCTGCTGTGTGAGTGAAAGTGACAGCTCATCCCGCTAGCATCAGCAccaccagattgctgtcaggatctc--gagggcaaggcccatgtctgattcaataacc-tgtattctgagcactcag----aagagagcttggcacactgtca--gtgctccctaaagaagttaaatggatgCTGCATAACCAGGGCAGCCCAGCAGCGTCGGTCCAGAGACAAGGGAGTGACACCTGCT-CCCTGACGCAATACATCCCGTACA-CCACAGCTCTGAATGTCCATGTTCAACTCATGCAGTGGTGGG--GG--AGA----CGAGAGAGACCTGAG--ACGGGGCACCTCTGAATGATCCCCCCACA-------GCCCGCAGGGCTGGCAGCCCCCTAGGAGACCCTGGAA--TGGACT----------CGCTGACAGCAGCCACCTATCTCATGG----CTTACACGTCCCCGCCCTTCAGCTTATGTTGCTTCCCTGCTCTTTCCTGCTAAAGTGGCCCC-TGCTGAATGCCGC--CAGCCA------CG-GGGTCATGCAGCTTCCCTCCTGAGCCTGATCCACTGAGGTTTCCAC--GTGTAGTCATGGGCTTTGCAATGA---CTGAGCTAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34988768 647 + 104879549 GCTTTAGGACTCTAGGAGCTCATCCCTAAACAAAGTGCGTGCTCC---ACACTCCCTGCAGAGGCTG--TGTTGC-------CGTCTGCTGTGTGAGTGAAGGTGACAGCTCATCCCGCTAGCATCAGCGccaccagattgctgtcaggatctc--gagggcaaggcccatgtctgattcaataacc-tgtattctgagcactcag----aagagagcttggcacactgtca--gtgctccctaaagaagttaaatggatgCTGCTTAACCAGGGCAGCCTAGCAGCGTCAGTCCAGAGACAAGGGAGTGACACTTGCT-CCCCGACGCAGTATATCCCGTACA-CCACAGCTCTGAATGTCCATGTTTAACTCATGCAGTGGTGGGGAGG--AGA----CGAGAGAGACCTGAG--ATGGGGCACCTCTGAATGATCCCCCCACA-------GCCCACAGGGCTGGCAGCCCCCTAGGAGACCCTGGAA--GGGACT----------CGCTGACAGCAGCCACCTATCTCATGG----CTCACACGTCCCCGCCCTTCACCTTATGTTGTCTTCCTGCTCTTTCCTGCAAAAGTGGCCTC-TGCTGAATGCCGC--CAGCCA------CG-GGGTCATGCAGCTTCCCTCCTGAGCCTGATCCA--GAGGCTTCCACATGAGTAGTCATGGGCTTTGCTACGA---CTGAGCTGA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73783186 639 - 130959383 GTTTTAGGACTCTAGGAGCTCATCACCTAACAAAGTGCATACTCC---ACACTCCCTGCAGAGGCTG--TGTTGC-------CGTCTGCTGTGTGCGTGAAGGTGACAGCCCATCCTGCTAGCATTAGCAccaccagattgctgtcagcatctc--gagggcaaggcccatgtctgattcaataacc-tgtattctgagcactcag----aagagagcttggcacactgtca--gtgctccctaaagaagttaaatggatgCTGCATAATCAGGGCAGCCCAGCAGCGTCAGTCCAGAGATAAGGGACTGACACCTGCT-CCCCGACGCAGTATATCCCGTACA-CCACAGCTCTGAATGTCCATGTTCAACTCATGCAGTGGTGGGGAGG--AGA----CGAGAGACACCTGAG--ACGGGGCACCTCTGAATGATCCCCACA-----------------------CAGCCCCCTAGGAGACCCTGGAA--TGGACT----------CGCTGACAGCAGCCACCTATCTCATGG----CTCACACATCCCTACCCTTCAGCTTATGTTGCCTCCCTGCTCTTTCCTGCTAAAGTGGCCCC-TGCTGAATGCCGC--CAGCCACAGGGTCA-GGGTCATGCAGCTTTCCTCCTGAGCCTGATCCACTGAGGTTTCCACATGCGTAGTCATGGGCTTTGCTATGA---CCGAGCTGC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75345396 639 - 133195287 GTTTTAGGACTCTAGGAGCTCATCACCTAACAAAGTGCATACTCC---ACACTCCCTGCAGAGGCTG--TGTTGC-------CGTCTGCTGCGTGCGTGAAGGTGACAGCCCATCCTGCTAGCATTAGCAccaccagattgctgtcagcatctc--gagggcaaggcccatgtctgattcaataacc-tgtattctgagcactcag----aagagagcttggcacactgtca--gtgctccctaaagaagttaaatggatgCTGCATAATCAGGGCAGCCCAGCAGCGTCGGTCCAGAGACAAGGGAGTGACACCTGCT-CCCCGACGCAGTATATCCCGTACA-CCACAGCTCTGAATGTCCATGTTCAACTCATGCAGTGGTGGGGAGG--AGA----CAAGAGACACCTGAG--ACGGGGCACCTCTGAATGATCCCCACA-----------------------CAGCCCCCTAGGAGACCCTGGAA--TGGACT----------CGCTGACAGCAGCCACCTATCTCATGG----CTCACACATCCCTACCCTTCAGCTTATGTTGCCTCCCTGCTCTTTCCTGCTAAAGTGGCCCC-TGCTGAATGCCGC--CAGCCACAGGGTCA-GGGTCATGCAGCTTTCCTCCTGAGCCTGATCCACTGAGGTTTCCACATGCGTAGTCATGGGCTTTGCTATGA---CCGAGCTGC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73209468 639 - 125196307 GTTTTAGGACTCTAGGAGCTCGTCACCTAACAAAGTGCATACTCC---ACACTCCCTGCAGAGGCTG--TGTTGC-------CGTCTGCTGTGTGCGTGAAGGTGACAGCCCATCCCGCTAGCATTAGCACCACCAGATTGCTGTCAGCATCTC--GAGGGCAAGGCCCATGTCTGATTCAATAACC-TGTATTCTGAGCACTCAG----AAAAGAGCTTGGCACACTGTCA--GTGCTCCCTAAAGAAGTTAAATGGATGCTGCATAATCAGGGCAGCCCAGCAGCGTCGGTCCAGAGACAAGGGAGTGACATCTGCT-CCCCGACGCAGTATATCCCATACA-CCACAGCTCTGAATGTCCATGTTCAACTCATGCAGTGGTGGGGAGG--AGA----CGAGAGACACCTGAG--ACGGGGCACCTCTGAATGATTCCCCCA-----------------------CAGCCCCCTAGGAGACCCTGGAA--TGGACT----------CGCTAACAGCAGCCACCTATCTCATGG----CTCACACATCCCTACCCTTCAGCTTATGTTGCCTCCCTGCTCTTTCCTGCTAAAGTGGCCCC-TGCTGAATGCCGC--CAGCCACAGGGTCA-GGGTCATGCAGCTTTCCTCCTGAGCCTGATCCACTGAGGTTTCCACATGCGTAGTCATGGGCTTTGCTATGA---CCGAGCTGC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72041820 639 - 125710982 GTTTTAGGACTCTAGGAGCTCATCACCTAACAAAGTGCATACTCC---ACACTCCCTGCAGAGGCTG--TGTTGC-------CCTCTGCTGTGTGCGTGAAGGTGACAGCCCATCCCGCTAGCATTAGCAccaccagattgctgtcagcatctc--gagggcaaggcccatgtctgattcaataacc-tgtattctgagcactcag----aggagagcttggcacactgtca--gtgctccctaaagaagttaaatgaatgCTGCGTAATCAGGGCAGCCCAGCAGCGTTGGTCCAGAGACAAGGGAGTGACACCTGCT-CCCCGACGCAGTATATCCCGTACA-CCACAGCTCTGAATGTCCATGTTCAACTCATGCAGTGGTGGGGAGG--AGA----CGAGAGACACCTGAG--ACGGGGCGCCTCTGAATGATCCCCCCA-----------------------CAGCCCCCTAGGAGCCCCTGGAA--TGGACT----------CGCTGACAGCAGCCACCTATCTCATGG----CTCACACATCCCTACCCTTCAGCTTATGTTGCCTCCCTGCTCTTTCCTGCTAAAGTGGCCCC-TGCTGAATGCCGC--CAGCCACAGGGTCA-GGGTCATGCAGCTTCGCTCCTGAGCCTGATCCACTGAGGTTTCCACATGCGTAGTCATGGGCTTTGCTATGA---CCGAGCTGC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75504301 644 - 121768101 GTTTTG-----CTAGGAGCCCATCACTAAACAAAGTGCACACTCC---ACACTCCCTGCAGAGGCTG--TGCTGC-------CCTCCA-GGTGTGAGTGAAGGTGATGGCCTACCCTGCTAGCATCAGCAccactagatggctgtcagcatctcaagggggcaagacccatgtctgattcaataacc-tgtattccgagcactcag----cagagagcttggcacactgtca--gtgctccctcaagaagttaaacggatgCTGCA-GACCAGGGCAGCCCAGCTGGGTTGGTCCAGAGGCAAGGGAGTGACACCCACT-CCCTGATGCAGTATATCCCGTATA-CCACAGCCCTGCAAGTCCACATTCAATTCAGGCAGGGGTGGGGAGG--GGA----CAAGAGAGACCTGAG--ATGGGGCACCTCTGAGTGATCCCCCCACA-------GCCCAAAGCACTGGCAGCCCCCTAGGAGACCCTGGAA--TGGACT----------TGCTGACAGCAGCCACGTACCTGATGG----CTCACACGTCCCCGCCCTTTGGCTTATGTTTCCCCCCTGCTCTTTCCTGCTAAAGTGACCGC-TGCTGAATGCCAC--CAGCCA------TG-GGGTCATGCAGCTTCCCTCCCGAGCCTGATCCACTGAGGTTTCCACATGTGTAGTCATGGGCTTTGTCATGA---CTGAGCTGA i calJac3.chr12 C 0 C 0 s mm10.chr14 24092923 576 + 124902244 TTCTTATTTTCCTGGCAGCCTTTTGTTACATGGAGTGCATTTTTTTTGACACTCTGGAATGAGACTGAATGTTGCTCTTCATCCCTTGCTCCAGGTGTGAAA-TGACTGGCCTCCTAGAGGGCATTGGTATCACTAGATAACAATCAGCATCTG--GAGGGCAGAGCTGATGTCTGAT--------------TTCTAAGCACTTGGTGTCGGTCGGCCTTGTCAAATGGTCAAGGTGTACCCCCAGGCAATCAAACCAAGACTA-------AGGAGAGGC------------TCCAGGAATAGGGCCATCACTCT------CTAGACCCAGTATGGCCCATACA-TT-CAGCTCCGTAAACCCACATCCGAGG-AAGCAGGGATGAGGAGA--AGAAAGCTGATAGACA--------GCGGGGCA---CTGAATG------CCACAATAATGTGCATCCAGGACCAACAGTGTCTTGGGAGATCCTGGAATTTGGTAA----------TACTGACCACATCCACCTGTCTCATGA----CTCACAAG------------------------------GCTCTTT-----AGAGGTAGGATT-TACTG-GTGCTGA--CA-CTA----------------GCATC------CCCAAGCCTGACCCACTGAAGTGCTTACACATGTATTTCCAGTCATGGATATGATTGCTGGGCTGA i mm10.chr14 I 76 I 39790 s canFam3.chr4 27659354 634 + 88276631 GTTTTG-----CTGGGAGCCCATGGCTACACGAAGTGCACGTTTC---ACAGTCAGGAC----------TGCTCC-------CCGTGACTAAGTG---GAAGGTGAGGGACCCTCCTG---GCATCAGCATCACCAGGTGGCTGT-GGCATTTC--AAGGGCAGGGCACAT-TCTGATACAATACCCTTGTATCCTGAGCACTCAG----AAAAGACTATGGCACACTGTCA--GCG-TCCACGAAAAAGTC-CCTGAATGGTGCTCTATCTGGGCAACACAGCAGGGTCAGGCCAGAGGTGAGGGAGCGCCGGCTGCTGCCCTGGCCCAGTATAACCAGCAAATCCCCAACTCTTAGAA--CACTTCCAAGGCAGGCAGGTGGGAGAAGGCCAAG----GGTGGGAGACAGGAG--GCTGGGAGGCTCTGAGCTCTCCACCCACA--------GCTACAGGCCTGGCGGTCCAGCTGAAGACCCTGGGA--CGGCATTACACTGAGGCGCTGCCCCCAACCCCCCCCCCCCCGGGCCCCACACATATCCCCACCTCCCAGCTCCCATTTCCTCCCCACACTTTGCAGCATACACAGCTTTGTGGTGTGTACCGCAGCACCTG------CGCCTGCCCTGCAGCCTTCTCCTC--GCCTGATCCACAGCGGCTGCCGG----------GAAGGCTCTGCCGTCA---CTGAGATGC i canFam3.chr4 C 0 C 0 a score=974125.000000 s hg38.chr10_KI270825v1_alt 9493 337 + 188315 AGACGCCTTCTTCCC-----TTTGAGGCCAGAA--AGAGAAAGCCCATGGGAGC---TGAAGTGCAG------ATGGGCAGCACT---GGCTCTTCCCTGTCAATGTGTGGATGGCAGAGGCATAGTCCTGGCTGGTACCTGCTGCCTCGGCCTTGGAGGTCACCACAGACCTGTCTCTTCTGTGGTTATCGCGCTTTGCCTGCCGCTGAGTCTCTCTGAGGTGATGCTCCTCCTGTCGTTGGCT-TGGCCCTCCAACCCAGA---CTGCATACTGTGGCCTC--TCAAAGCAATGTCGCCTGATACTCAGGCCAGAAAGAGAA-GGGAGGAGAGTGGGGAGGAGAGGGGTGGAGGCGATAGC s panTro4.chr10 76380101 337 + 133524379 AGATGCCTTCTTCCC-----TTTGAGGCCAGAA--AAAGAAAGCCCACGGGAGC---TGAAGTGCAG------ATGGGCAGCACT---GGCTCTTCCCTGTCAATGTGTGGATGGCAGAGGCACAGTCCTGGCTGGTACCTGCTGCCTCGGCCTTGGAGGTCACGACAGACCTGTCTCTTCTGTGGTTATCGCGCTTTGCCTGCCGCTGAGTCTCTCTGAGGTGATGCTCCTCCTGTCGTTGGCT-TGGCCCTCCAACCCAGA---CTGCATACTGTGGCCTC--TCAAAGCAATGTCGCCTGATACTCAGGCCAGAAAGAGAA-GGGAGGAGAGTGGGGAGGAGAGGGGTGGAGGCGATAGC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76047904 338 - 133410057 GGACGCCTTCTTCCC-----TTTGAGGCCAGAA--AGAGAAAGCCCACGGGAGC---TGAAGTGCAG------ATGGGCAGCGCT---GGCTCTTCCCTGTCAATGTGTGGATGGCAGAGGCACAGTCCTGACTGGTACCTG--GCCCTGGCCTGGGAGGTCACCACAGACCTGTCTCTTCTGTGGTTATCGCGCTTTGCCTGCCGCTGAGTCTCTCTGAGGTGATGCTCCTCCTGTCGTTGGCT-TGGCCCTCCAACCCAGACTGCTGCATACTGTGGCCTC--TCAAAGCAATGTCGCCTGATACTCAGGCCAGAAAGAGAA-GGGAGGAGAGTGGGGAGGAGAGGGGTGGAGGCGATAGC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34989415 337 + 104879549 GGACGCCTTCTTCCC-----TTTGAGGCCAGAA--AGAGAAAGCCCACGGGAGC---TGAAGTGCAG------ATGGGCAGCGCT---GGCTCTTCCTTGTCAATGTGTGGATGGCAGAGGCACAGGCCTGGCTGGTACCTGCTGCCCTGGCCTGGGAGGTCACCACAGACCTGTCTCTTCTGTGGTTATCGCACTTTGCCTGCCGCTGAGTCTCTCTGAGGTGATGCTCCTCCTGTCGTTGGCT-TGGCCCTCCAACCCAGA---CTGCATACTGTGGCCTC--TCAAAGCAATGTCACCTGATACTCAGGCCAGAAAGAGAA-GGGAGGAGAGTGGGGAGGAGAGGGGTGGAGGCGATAGC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73783825 330 - 130959383 GGATGCCTTCTTCCC-----TTTGAGGCCAGAA--AG----AGCCCACGGGAGC---TGGCGTGCAG------ATGGGCAGCGCT---GGCTCTTCCCTGTCAATGTGCGGATGGCAGAGGCACAGTCCTGGCTGGTACCTGCTG----GGCCTGGGGGGTCACCACAGACCCGTCTCTTCTGTGGTTATCGTGCTTTGCCTGCCGCTGAGTCTCTCTGAGGTGATGCACCTCCTGTCGTTGGCT-TGGCCCTCCAACCCAGA---CCGCATACTGTGGCCTC--TCAAAGCAATGTCTCCTGATACTCAGGCCAGAAAGAGAAGGGGAGGAGAGTGGGGAGGAGAGGGGTGGAGGTGATAGC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75346035 330 - 133195287 GGATGCCTTCTTCCC-----TTTGAGGCCGGAA--AG----AGCCCACGGGAGC---TGGCGTGCAG------ATGGGCAGCGCT---GGCTCTTCCCTGTCAATGTGCGGATGGCAGAGGCACAGTCCTGGCTGGTACCTGCTG----GGCCTGGGGGGTCACCACAGACCCGTCTCTTCTGTGGTTATCGTGCTTTGCCTGCCGCTGAGTCTCTCTGAGGTGAGGCACCTCCTGTCGTTGGCT-TGGCCCTCCAACCCAGA---CCGCATACTGTGGCCTC--TCAAAGCAATGTCTCCTGATACTCAGGCCAGAAagagaaggggaggagagtggggaggagaggggtggaggtgatagc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73210107 317 - 125196307 GGATGCCTTCTTCCC-----TTTGAGGCCAGGA--AG----AGCCCACGGGAGC---TGGCGTGCAG------ATGGGCAGCGCT---GGCTCTTCCCTGTCAATGTGCGGATGGCAGAGGCACAGTCCTGGCTGGTACCTGCTG----GGCCTGGGGGGTCACCACAGACCCGTCTCTTCTGTGGTTATCGTGCTTTGCCTGCCGCTGAGTCTCTCTGAGGTGATGCACCTCCTGTCGTTGGCC-TGGCCCTCCAACCCAGA---CCGCATACTGTGGCCTC--TCAAAGCAATGTCTCCTGATACTCAGGccagaaagagaa-------------gggaggagaggggtggAGGTGATAGC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72042459 329 - 125710982 GGATGCCTTCTTCCC-----TTTGAGGCCAGAA--AG----AGCCCACAGGAGC---TGGCATGCAG------ATGGGCAGTGCT---GGCTCTTCCCTGTCAATGTGCGGATGGCAGAGGCACAGTCCTGGCTGGTACCTGCTG----GGCCTGGGGGGTCACCACAGACCCGTCTCTTCTGTGGTTATCGTGCTTTGCCTGCCGCTGAGTCTCTCTGAGGTGATGCACCTCCTGTCGTTGGCT-TGGCCCTCCAACCCAGA---CCGCATACTGTGGCCTC--TCAAAGCAATGTCTCCTGATACTCAGGCCAGAAAGAGAA-GGGAGGAGAGTGGGGAGGAGAGGGGTAGAGGTGATAGC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75504945 317 - 121768101 GGACGCCTTCTTCCC-----TTTGAGACCAGAA--AGAGAAAGCCCACAGGAGC---TGAAGGGCAG------CTGGGCAGCAC--------------TGTCAACGTGCAGACGACAGAGGCCCGGGCCTGGCTGGTGCCTGCTGCCCTAGCCAGGGAGGTC-------ACCCGTCTCTTCCGCAGTTATCCTGCTTTGCCTGCTGCTGAG--TCTCTGAGGTGACGCTCCTTCTGTCGTTGGCT-CAGCCCTCCAACCCAGA---CCGCACACTGTGGCCTC--TCAAAGCAATGTCTCCTGATAAGCTGGCCAGAAACAGAA-GGGAGGAGAGTGGGGAGGAGAGGGTTGGAGGCGACAGC i calJac3.chr12 C 0 C 0 s canFam3.chr4 27659988 296 + 88276631 TGAGGCTATGTGCCTGGGGAGCTGAGCCCGGAGCCCGGGGCCGCCCCAGGGAGCATGCGGCCTGCAGGCTAAAGTGGGGTGGGTTCTGGGCCGCTCCCTGTCA------------CAGACTC----TCTCGGCCGGG--TGACTGTCCCGGCCTGGG------CCCCAGGTCT---------------------CCTTG-CTGCTACTGGG--TCTCTGAGAGCCTGC-CCTCCGGCCCTCAGAGACGGCCCCTCAG---------CCACACACCCTGGCCTCCTTCCAAACATTGTTCACTGATG----GGCCAGATGGGCAG-CGAAGGAGAGCAggg----gtggggtgggggtgggagt i canFam3.chr4 C 0 I 11425 e mm10.chr14 24093499 39790 + 124902244 I a score=3549018.000000 s hg38.chr10_KI270825v1_alt 9830 1116 + 188315 AGAACTTCCTTCCAGAGTCTCTATATTCTTCTGTGTTGTTTGAA----CACAACAACCATATACTATCTCTGTGATTT-AAATTCAAATTTCAATGAGAATTAAAAGTTGAAGCTCAGGCCACACTGCTGTGCGTTTTTTAGAGAGATATGTTTGACTGAAAGCATATCAAGGG-GCAGGAAGAATTTTTTGCTGGGCAGTATAACCAGGGCAGAGAAAGG-TTTTTATTTCTTAAAAATATTTTCTATATCATa------aaaaaaaaaaaaaaaaaaaGGCCAGGAGTCAAAACTAGACCCTCCTTCGGCC----CCATGG-----ACCTAGCCAGTGGAGCAG-GGGTCCCAGCCCTCATGCCATGAGG-----------------------------------------TGCTGG-GGAGAGGCAAGAGAGAG-CTGGTGCTGCTGCCATTCTCCCCAGCTGAGTACA--GGACCCAGGAGGAAGGCCCAGCCCCAGTCGGGGTGCAGCAGCTGCAGACAGACCCTACTCTTTGTGGTCAGGCCACACTCTGAGACATAGTTCAACCTCTGGACAACTTTCCCTGTGAGCCCAACTCAACCCATCCCAGTCCGGCCCAAGAGGTGTCATCATCATCACATTGAGGGCCAGCTGCCCCATCACAGGGCAAGCAGCCCTGACCCAGGAGGTAACCGGAAGCAGCTTTG-------CTCCTCTAGAAACAGAATCCACGT------GAGGCTCACTGCCCTCCTAGGGGGTCTCCATGTGTTCCCTTCCCCTATCCCAAGGGAAAGTCTCCAAGCCTTGTCTTTACAGAAGGGAACATTGAGACCCAAAGAACCGGGCTGACTCTGTCCACGTCACCGGGG--CACAGCCAGAAGCCTTTTAA--------CACCAACTCCCTTG----------AATAAGACATTCCTGGCACCCAGAAGGGATTTCTATGCTCAGAGCCATACCTTCACTCTCCATACAAGACAGAAATCTCA---GTTTACTCAGTACACGCACCCGGAGTGAGGTCAGAATTCCCCCTGATTTCATACCAGTAGT----------TTATTAAGGAAGCCAGGCCACCAGCTGTCATTCTGATGCTCTCAAGAAGGCAGTCTCCGGTAGAAATGCACCAATCCTTTTCGCTGATGTTTCTCCTGCTTTTAAGTAGCCTCATTAAGAAA-----AGTAATTAGGACCTTATT s panTro4.chr10 76380438 1119 + 133524379 AGAAATTACTTCCAGAGTCTCTATATTCTTCTGTGTTGTTTGAA----CACAACAACCATATACTATCTCTGTGATTT-AAATTCAAATTTCAATGAGAATTAAAAGTTGAAGCTCAGGCCACACTGCTGTGTGTTTTTTAGACAGATATGTTTGACTCAAAGCATATCAAGGG-GCAGGAAGAATTTTTTGCTGGGCAGTATAACCAGGGCAGAGAAAGG-tttttatttcttaaaaatattttctatgtcatt------aaaaaaaaaaaaaaaaaaaGGCCAGGAGTCAAAACTAGACCCTCCTTTGGCC----CCATGG-----ACCTAGCCAGTGGAGCAG-GGGTCCCAGCCCTCATGCCATGAGG-----------------------------------------TGCTGG-GGAGAGGCAAGAGAGAG-CTGGTGCTGCTGCCATTCTCCCCAGCTGAGTACA--GGACCCAGGAGGAAGGCCCAGCCCCAGTCAGGGTGCAGCAGCTGCAGACAGACCCTACTCTTTGTGGTCAGGCCACACTCTGAGACATAGTTCAACCTCTGGACAACTTTCCCTGTGAGCCCAACTCAACCCATCCCAGTCCGGCCCAAGAGGTGTCATCATCATCACATTGAGAGCCAGCTGCCCCATCACAGGGCAAGCAGCCCCGACCCAGGAGGTAACCAGAAGCAGCTTTG-------CTCCTCTAGAAACAGAATCCACGT------GAGGCTCACTGCCCTCCTAGGGGGTCTCCATGTGTTCCCTTCCCCTATCCCAAGGGAAAGTCtccaagccttgtctttacagaagggaacattgagacccaaagaactgggctgactctgtccacgtcacagagG--TACAGCCAGAACCCTTTTAA--------CACCAACCCCTTTG----------AAAAAGACATTTCTGGCACCCAGAAGGGATTTCTATGCTCAGAGCCATACCTTCACTCTTCATACAAGAAAGAAATTTCA---GTTTACTCAGTACACGCACCCGAAGTGAGGTCAGAATTCCCC--GATTTCATACCAGTACT----------TTATTAAGGAAGCCAAGCCACCAGCTGTCATTCTGAGGCTCTCAAGAAGGCAGTCTCAGGTAGAAATGCACCAATCCTTTTCGCTGATGTTTCTCCTGCTTTTGAGTAGCCTCATTAAGAAATGAAAAGTAATTAGGACGTTATT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76048242 1113 - 133410057 AGAACTTCCTTCCAGAGTCTCTATATTCTTCTGTGTTGTTTGAA----CACAACCACTATATACTATCTCTGTGATTT-AAATTCAAATTTCAATGAGAATTAAAAGTTGAAGCTCAGGCCACACTGCTGTGCATTTTTTACAGAGATATGTTTGACTCAAAGCACGTCAAGGG-GAAGGAAGAATTTTTTGCTGGGCAGTATAACCAGGGCAAAGAAAGG-TTTTTATTTCTTAAAAATATTTTCTATATCAT--------------GAAAAAAAAAAAGGCCAGGAGTCAAAACTAGACCCTCCTTCGGCC----CAATGG-----ACCTAGCCAGCGGAGCAG-GGGTCCCAGCCCTCATGCCATGAGG-----------------------------------------TGCTGG-GGAGAGGCAAGGGAGCG-CTGGTGCTGCTGCCATGCTCCCCAGCTGAGTACA--GGACCCAGGAGGAAGGCCCAGCCCCAGTTGGGGTGCAGCAGCTGCAGACAGACCCTACTCTTTGTGGTCAGGCCACACTCTGAGACACAGTTCAACCTCTGGACAACTTTCCCTGTGAGCCCAACTCAACCCATCCCAGTCCGGCCCAAGAGATGTCATCATCATCACATTGAGGGCCAGCTGCCCCATCACAGGGCAAGCAGCCCCGACCCAGGAGGTAACCGGAAGCAGCTTTG-------CTCCTCTAGAAACAGAATCCACGT------GAGGCTCACTGCCATCCTGGGGGGTCTCCATGTGTTCCCTTCccccatcccaagggaaagtctccaagccttgtctttacagaagggaacactgagacccaaagaaccgggctgactctgtccatgtcacagagG--CACAGCCAGAACCCTTTTAA--------CACCAACCCCTTTG----------AAAAAGACATTTCTGGCACCCAGAAGGGATTTCTGTGCTCAGAGCTATACCTTCACTCTTCATACAAGAAAGAAATTTCA---GTTTACTCAGTACATGCACCCAAAGTGAGGTCAGAATTCCCCCTGATTTCACACCAGTAGT----------TCATTAAAGAAGCCAGGCCACCAGCTGTCATTCTGAGGCTCTCAAGAAGGCAGTCTCAGGTAGAAATGCACCAATCCTTTTCGCTGATGTTTCTCCTGCTTTTGAGTAGCCTCATTAAGAAATGAAAAGTAATTAGGACCTTATT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34989752 1110 + 104879549 AGAACTTCCTTCCAGAGTCTCTGTATTCTTCTGTGTTGTTTGAA----CACAACAACCATATACTATCTCTGTGATTT-AAATTCAAATTTCAATGAGAATTAAAAGTTGAAGCTCAGGCCACACTGCTGTGCGTTTTTTAGAGAGAGATGTTTGACTCAAAGCATATCAAGAG-GCAGGAAGAATTTTTTGCTGGGCAGTATAACCAGGGCAGAGAAAGG-TTTTTATTTCTTAAAAATATTTTCTATATGAT--------------AAAAAAGAAAAAGGCCAGGAGTCAAAACTAGACCCTCCTTCGGCC----CAATGG-----ACCTAGCCAGCGGAGCAG-GGGTCCCAGCCCTCATGCCATGAGG-----------------------------------------TGCTGG-GGAGAGGCAAGGGAGTA-CTGGTGCTTCTGCCATGCTCCCCAGCTGAGTACA--GGACCTAGGAGGAAGGCCCAGCCCCAGTCGGGGTGCAGCAGTTGCAGACAGACCCTACTCTTTGTGGTCAGGCCACACTCTGAGACACAGTTCAACCTCTGGACAACTTTCCCTGTGAGCCCAACTCAACCCATCCCAGTCCGGCCCAAGAGGTGTCATCATCATCACATTGAGGGCCAGCTGCCCCATCACAGGGCAAGCAGCCCCCACCCAGGAGGTAACCGGAAGCAGCTTTG-------CTCCTCTAGAAACAGAAACCACAT------GAGGCTCACTGCCCTCCTAGGGAGTCTCCATGTGTTCCCTTCCCCCATCCCAAGGGAAAGTCTCCAAGCTTTGTCTTTACAGAAGGGAACATTGAGACCCAAAGAACCGGGCTGACTCTGTCCATGTCACAGAGG--CACAGCCAGAACCCTTTTAA--------CACCAACTCCTTTG----------AAAAAGACATTTCTGGGACCCAGAAGGGATTTCTGTGCTCAGAGCCATACCTTCACTCTTCATACAAGAAAGAAATTTCA---GTTTACTCAGTACACGCACCCGAAGTGAGGTCAGAATTGCCCCTGATTTCATACCAGGAGT-------------TTAAGGAAGCCAGGCCACCAGCTGTCATTCTGAGGCTCTCAAGAAGGCAGTCTCAGGTAGAAATGCACCAATCCTTTTCACTCATGTTTCTCCTGCTTTTGAGTAGCCTCATTAAGAAATGAAAAGTAATTAGGACCTTATT i nomLeu3.chr18 C 0 I 871 s rheMac3.chr9 73784155 1167 - 130959383 AGAACTTCCTTCCAGAGTCTCTATATTCTTCTGCGTTGTTTGAA----CACAACAACTATATACCATCTCTGTGATTT-AAATTCAAATTTCAATGAGAATTAAAAGTTGAAGCTCAGGCCACACTGCTGTGCGTTTTTTAGTGAGATATGTTTGACTCAAAGCATATCAAGGC-GCAGGAAGAATTTTTTGCCGGGCAGTATAACCTAGGCAGAGAAAGG-TTTTTGTTTCTTAAAAATACTTACCATGTCATT--aaaaaaaaaaaaaaaaaaaaaaaGGCCAGGAGTCGAAACTAGACCCTCCTTCGGCCCCATCCATGG-----ACCTAGCCAGTTGAGCAG-GGGTCCCAGCCCTCATGCCATGAGGGCCAGTTGAGCAGGGGTCCCAGCCCTCACGCCATGAGGTGCTGCTGG-GGAGAGGCAAGGGAGCA-CTGGTGCTGCTGCCATGCTCGCCAGCTGAATGCA--GGACCCAGGAGGAAGGCCCAGCCCCAGTCGGGGTGAAGCTGCTGCAGACAGACCCTACTCTTCATGGTCAGACCACACTCGGAGACACAGCTCAACCTCTGCACAACTTTCCCGATGAGCCCAACTCAACCCATCCCAGTCCGGCCCAAGAGGTGTCATCATCATCACACTGAGGGCCAGCTGCCCCATCACAGAACAAGCAGCCCCGACCCAGGAGGTAACCAGAAGCAGCTTTG-------CTCCTCTAGAAACAGACTCCATGT------GAGGCTCACTGCCCTCCTAGGGGGTCTCCATGTGTTCCCTTCCCCCATCCCAAGGGAAAGTCtccaagccttgtctttacagaagggaacattgagacccaaagaaccgggctggctctgtccaggtcacagagG--CACAGCCAGAACCCTTTCAA--------CACCAACCCCTTTG----------AA-AAGACATTTCTGGCACCTAGAAGGGATTTCTGTGCTCAGAGCCATAACTTCACTCTTCATACAAGAAAGAAATTTCA---GTTTACTCAGGACATGCACCCGAAGTGAGGTCAGAATTCCCC--GATTTCATACCAGTAGT----------CTATTAAGGAAGCCAGGCCACCAGCTGTCATTCTGAGGCTCTCAAGAAGGCAGCCTCAGGTAGAAATACCCCAATCCTTTTCACTGATGTTTCTCCTGCTTTTCAGTAGCCTCATTAAGAAATGAAAATTAATTAGGACCTTATT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75346365 1128 - 133195287 agaACTTCCTTCCAGAGTCTCTATATTCTTCTGCGTTGTTTGAA----CACAACAACTATATACCATCTCTGCGattt-aaattcaaatttcaatgagaattaaaagttgaaGCTCAGGCCACACTGCTGTGCGTTTTTTAGTGAGATATGTTTGACTCAAAGCATATCAAGGC-GCAGGAAGAATTTTTTGCCGGGCAGTATAACCTAGGCAGAGAAAGG-TTTTTGTTTCTTAAAAATACTTTCCATGTCATTaaaaaaaaaaaaaaaaaaaaaaaaaGGCCAGGAGTCGAAACTAGACCCTCCTTCGGCCCCATCCATGG-----ACCTAGCCAGTTGAGCAG-GGGTCCCAGCCCTCATGCCATGAGG-----------------------------------------TGCTGG-GGAGAGGCAAGGGAGCA-CTGGTGCTGCTGCCATGCTCGCCAGCTGAATGCA--GGACCCAGGAGGAAGGCCCAGCCCCAGTCGGGGTGAAGCTGCTGCAGACAGACCCTACTCTTCATGGTCAGACCACACTCGGAGACACAGCTCAACCTCTGCACAACTTTCCCTATGAGCCCAACTCAACCCATCCCAGTCCGGCCCAAGAGGTGTCATCATCATCACACTGAGGGCCAGCTGCCCCATCACAGAACAAGCAGCCCCGACCCAGGAGGTAACCAGAAGCAGCTTTG-------CTCCTCTAGAAACAGACTCCATGT------GAGGCTCACTGCCCTCCTAGGGGGTCTCCATGTGTTCCCTTCCCCCATCCCAAGGGAAAGTCTCCAAGCCTTGTCTTTACAGAAGGGAACATTGAGACCCAAAGAACCGGGCTGGCTCTGTCCAGGTCACAGAGG--CACAGCCAGAACCCTTTCAA--------CACCAACCCCTTTG----------AA-AAGACATTTCTGGCACCTAGAAGGGATTTCTGTGCTCAGAGCCATAACTTCACTCTTCATACAAGAAAGAAATTTCA---GTTTACTCAGGACATGCACCCGAAGTGAGGTCAGAATTCCCC--GATTTCATACCAGTAGT----------TTATTAAGGAAGCCAGGCCACCAGCTGTCATTCTGAGGCTCTCAAGAAGGCAGCCTCAGGTAGAAATACCCCAATCCTTTTCACTGATGTTTCTCCTGCTTTTCAGTAGCCTCATTAAGAAATGAAAATTAATTAGGACCTTATT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73210424 1129 - 125196307 AGAACTTCCTTCCAGAGTCTCTATATTCTTCTGCGTTGTTTGAA----CACAACAACTATATACCATCTCTGcgattt-aaattcaaatttcaatgaGAATGAAAAGTGGAAGCTCAGGCCACACTGCTGTGCGTTTTTTAGTGAGATACGTTTGACTCAAAGCATATCAAGGT-GCAGGAAGAATTTTTTGCCGGGCAGTATAACCTAGGCAGagaaaggttttttgtttcttaaaaatactttccctgtcattaaaaaaaaaaaaaaaaaaaaaaaaaggccaggagtCGAAACTAGACCCTCCTTTGGCCCCATCCATGG-----ACCTAGCCAGTTGAGCAG-GGGTCCTAGCCCTCATGCCATGAGG-----------------------------------------TGCTGG-GGAGAGGCAAGGGAGCA-CTGGTGCTGCTGCCATGCTCGCCAGCTGAATGCA--GGACCCAGGAGGAAGGCCCAGCCCCAGTCAGGGTGAAGCTGCTGCAGACAGACCCTACTCTTCATGATCAGACCACACTCTGAGACACAGCTCAACCTCTGCACAACTTTCCCTATGAGCCCAACTCAACCCATCCCAGTCCGGCCCAAGAGGTGTCATCATCATCACACTGAGGGCCAGCTGCCCCATCACAGGACAAGCAGCCCCGACCCAGGAGGTAACCAGAAGCAGCTTTG-------CTCCTCTAGAAACAGACTCCACGT------GAGGCTCACTGCCCTCCTAGGGGGTCTCCATGTgttcccttcccccatcccaaGGGAAAGTCTCCAAGCCGTGTCTTTACAGAAGGGAACATTGAGACCCAAAGAACCAGGCTGGCTCTGTCCAGGTCACAGAGG--CACAGCCAGAACCCTTTCAA--------CACCAACCcctttg----------aa-aagacatttctggCACCTAGAAGGGATTTCTGTGCTCAGAGCCATAACTTCACTCTTCATACAAGAAAGAAATTTCA---GTTTACTCAGTACATGCACCCGAAGTGAGGTCAGAATTCCCC--GATTTCATACCAGTAGT----------TTATCAAGGAAGCCAGGCCACCAGCTGTCATTCTGAGGCTCTCAAGAAGGCAGCCTCAGGTAGAAATACCCCAATCCTTTTCACTGATGTTTCTCCTGCTTTTCAGTAGcctcattaagaaatgaaaattaattagGACCTTATT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72042788 1127 - 125710982 AGAACTTCCTTCCAGAGTCTCTATATTCTTCTGCGTTGTTTGAA----CACAACAACTATACACCATCTCTGCGATTT-AAATTCAAATTTCAATGAGAATTAAAAGTGGAAGCTCAGGCCACACTGCTGTCTGTTTTTTAGCAAGATATGTTTGACTCAAAGCATATCAAGGG-GCAGGAAGAATTTTTTGCTGCACAGTATAACCTAGGCAGAGAAAGG-TTTTTGTTTCTTAAAAATACTTTCCATGTCATT----------AAAAAAAAAAAAAAAGGCCAGGAGTCGAAACTAGACTCTCCTTCACCCCCATCCATGG-----ACCTAGCCAGTTGAGCAG-GGGTCCCAGCCCTCATGCCATGAGG-----------------------------------------TGCTGG-GGAGAGGCAAGGGAGCA-CTGGTGTTGCTGCCATGCTCCCCGGCTGAATGCA--GGACCCAGGAGGAAGGCCCAGCCCCAGTCGGGGTGAAGCTGCTGCAGACAGACCCTACTCTTCATGGTCAGACCACACTCTGAGACACAGCTCAACCTCTGCACAACTTTCCCTATGAGCCCAACTCAACCCATCCCAGTCCGGCCCAAGAGGTGTCATCATCATCACACTGAGGGCCAGCTGCCCCATCACAGGACAAGCAGCCCCAACCCAGGAGGTAACCAGAAGCAGCTTTG-------CTCCTCTAGAAACAGACTCCACGT------GAGGCTCACTGCCCTCCTA-GGGGTGTCCATGTGTTCCCTTCCCCCATCCCAAGGGAAAGTCTCCAAGCCTTGTCtttacagaagggaacattgagacccaaagaactgggctggctctgtccaggtcacagagG--CACAGCCAGAACCCTTTCAACACCAACCCACCAACCCCTTTG----------AA-AAGACATTTCTGGCACCTAGAAGGGATTTCTGTGCTCAGAGCCATAACTTCACTCTTCATACAAGAAAGAAATTTCA---GTTTACTCAGTACACGCACCCGAAGTGAGGTCAGAATTCCCCCTGATTTCATACCAGTAGT----------TTATTAAGGAAGCCAGGCCACCAGCTGTCATTCTGAGGCTCTCAAGAAGGCAGCCTCAGGTAGAAATGCCCCAATCCTTTTCACTGATGTTTCTCCTGCTTTTCAGTAGCCTCATTAAGAAATGAAAATTAATTAGGACCTTATT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75505262 1083 - 121768101 AGAAATTCCTTCCAGATTCTCTATA---TTCTGTGTTGTTTGAA----CACAATAAGCATATACTATCTCTGTGATTT-AAATTCAAATGTCAGTGAA----AAAAGTCAAAGCTCAGGCCATACTGCTGTGGGTTC-------AGAGAGGTTTGACTCAAAGCCTATCATGGG-GCAGGAAGAATTTTTTGCTGGTCAGTATAACCAGGGCAGAGAAAGG-TTTTTATTTCTTAAAAATGTTTTCTA---CATT-------------AAAAAAAAGAAAGTCCAGGAGTCAAAACTAGACCCTCCTTCATTC----CAATGG-----ACATAGGTAGCAGAGCCA-GGGACCCAGTCCTTGTGCCAGGAGG-----------------------------------------TGCTGG-GGAGAGGCAGGGGAGCCTCGGGTGCTGCTGCCATGCTCCCCAGCCGAGTACA--GGGCCCAGGAAGAAGACCCAGCCCTAGTTGGGGTGCAGCAGCTGCACATACACCCTACTCTTTGTGGTCAGGCCACACTCTGAGACCCAGCTCAGCCTCTAAACAACTTTCCCTGGGAGCCAAACTCAACCCATCCCAGTCCTGGCCAAGAGGTGTCACCATCATCACATTGAGGGCCAGCCGCCCCATCACAGGGCAAGCCGCCCTGACCCAGGAGGCAACCAGAAGAAGCTTTG-------CTCCCCTAGAAGCAGACTCCACGA------GAGGCTCACTGCCCTCCTAGGGGGTCTCCATGTGTTCCCTTCCCCCATCCCAAGGGAAGG-CtccaagccttgtctttacagaagggaacactgagacccagagaccgggggtgactctggccaggtcacagagA--CACAACCAGAACACTTTTAA--------CACCAACCCCTTTG----------AAAAAGACATTTCTGGCACCTAGAAGAGATGTCTGTGCTCAGAGCCATAACTTCACTCTTCATACAAGAAAGAAGTTTCA---GTTTACTCAGCACACTCACCCCAAGTGAGGTCAGAATTCCCTCTGACTTCATACCGGCAGT----------TTCTTAAGGAAGCCAGGCCATGAGTTGTCATTCTGAGGCTCTCAAAAAGGTGGTCCCAGGTG--------------CTTTTTGCTGATATTTCTCCTGCTTTCAAGTAGCTTCATTAATAAATGAAAATTAATTAGGACCTTATT i calJac3.chr12 C 0 C 0 s canFam3.chr4 27671709 1081 + 88276631 GGACCTTCCTTCTTCA--CACTATATTCTTCTGTGTTATCAGAATGCCCACAATAAGCAAATACTATCTCTGTGATTTCAAACTCCAGTGTTGAAAAGAATTAAAAATTGAA--------------GCTATGAGTTC---AAAGGAATATGTCTGACTCCAAATGTATCATGGGTTCAGAACTAATTTTTTGCTGGTCAGTATAACCTAGGCAGGGAAGTG-TTTTAGTTTTAT-AAAATGTTGTCTAAGTC-----------------------GGAAAGTATAGGAGTCATAATCAGATCTG--TTCAGCC-CACCCTTAGGAGAAAATTAGCCAGTAGGGCGGAAAGGCTTGGCTCTACTGCAGAAAGG-----------------------------------------CATTGGAAGCAAGGCAGTGGAGTG-CCGGCCCTGCCCTAATGCTTGGGAGCCAAGGACAGGGGACACCGAAGGAAGGCCCAGCCCTAGTC-------AGCAATCCCAGTCAGGCCCTCTTCTGCTTGGTTAAATCACACTTTGAGACCCAGA-CAAACTCTGACCAACTTTCCTTATGGTCCCGGCTCAACCCATCCTAGTCCAGGCCAAGAGGCATCGCTTCCATCGCATCAAGTGCCAGCTTCCCTATCCAAAG-----------------AGTGGACAACCTGCATTAGCTAGGCCATGGTCTCCTCCC----CAGACTCCACATGGTCAAGAGGCTGACTGCTCTCCTAGGgggatcttccatgatcctttgccccac-------------------accctatctttccagatgggaaaactgaaactcaaagaacttgggtgactctgacaaggtcacagtgatttagaggcggTAACCTTTTAA--------TGCTGACTCTCTTGGCTTGAGAAAAAGAAAACACT-CTGGCACTTTGGAGAGATTTCTATACTCAGAGAC-TACCTTAACGCTATATACAAGAAGAAAATTCCAATGGCTTACTCAAGACACCTGCCCTAAGTGA-GTTAGCATTCCCATGAGCTACAAACAAGTAGCATAGTCAGGCTTTCTAAGGAAGCCAGGAAAGCAGCTGTCACTCTGAGTCTCTCGGGAAGGCAGCCTTGGGTGGGATGGCACCGACAGCCTCTCGTGCTGCTGCTCCTCGTTCCAAGGAGTGTCACAGAGACTTAAGAAGTCGTT------TCATT i canFam3.chr4 I 11425 C 0 e mm10.chr14 24093499 39790 + 124902244 I a score=184438.000000 s hg38.chr10_KI270825v1_alt 10946 56 + 188315 AAGAAGTCCTTTCAGTTGTCGTCGTTAAGAAGAAGGTGCTCATCAGCTATCCTAGG s panTro4.chr10 76381557 56 + 133524379 AAGAAGTCCTTTTAGTTGTCGTCGTTAAGAAGAAGGTGCTCATCAGCTATCCTAGG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76049355 56 - 133410057 AAGAAGTCCTTTTAGTTGTCGTAGTTAAGAAGAAGGTGCTCATCAGCTATCCTAGG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34991733 53 + 104879549 aagaaGTCCTTTTAGTTGTCGTGGTT---AAGGAGGTGCTCATCAGCTATCCTAGG i nomLeu3.chr18 I 871 C 0 s rheMac3.chr9 73785322 56 - 130959383 GAGAAGTCCTTTTAGTTGTCGTGGTTAAGAAGAAGGTGCTCATCAGCTATCCTAGG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75347493 56 - 133195287 GAGAAGTCCTTTTAGTTGTCGTGGTTAAGAAGAAGGTGCTCATCAGCTATCCTAGG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73211553 56 - 125196307 GAGAAGTCCTTTTAGTTGTCATGGTTAAGAAGAAGGTGCTCATCAGCTATCCTAGG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72043915 56 - 125710982 AAGAAGTCCTTTTAGTTGTCATGGTTAAGAAGAAGGTGCTCATCAGCTATCCTAGG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75506345 56 - 121768101 AAAAAGAGCTTTTGGTTGTGATGGTTAAGAAGAAGGTGCTGATTGGCTATTCTAGG i calJac3.chr12 C 0 C 0 s canFam3.chr4 27672790 55 + 88276631 AAGAAGTG-TTTTAGTTGTCGTTTTGAACAAGTAGGCATTAATCGGCCATCCTAGG i canFam3.chr4 C 0 I 123 e mm10.chr14 24093499 39790 + 124902244 I a score=1504336.000000 s hg38.chr10_KI270825v1_alt 11002 501 + 188315 TGGAGTCCTCGGCCTCCTCCCAGAAGAACTTGTCTTCATGGACACAAACATATATTCCCAGGAGCCAATGAAG----AGAGCTTGAACTC--TGCCTTCTCCTGGGTTCCCTTCCCAGGAAGCAATCTTGCCCT-----------GGAGTGGGGGCAGCAGGATTGCAGGGCAAAAAGAGTAGGGGAAGGACCTCACATCCAGGGTAAGGGGCTATCTACCTCGAAAGGGCCAGTAAGGAACATCTGGGGAAGGAGACCAGAGGCCCTTTGTGACTCCCTCAGATTAGTTCCGTGTGTAGGTAGAGCTCCAACCTGAAAACCCAGCAAGGAATTGGACTGGGGTCAGGGAAGCAGTGGCAGGGACCTGTGGCCCAGCCAATTCATGGACCAGCCTTGCCCGGCCCGGGGTCTGCTTGCACCAAGGAATGTGTGCAGTGGCAGgaaagctgttctccatactgatca-gaaatctg---cctcctggaatgtctttccttgggcctgcttctgATGGCCGTCC s panTro4.chr10 76381613 501 + 133524379 TGGAGTCCTCAGCCTCCTCCCAGAAGAACTTGTCTTCATGGACACAAACATATATTCCCAGGAGCCAATGAAG----AGAGCTTGAACTC--TGCCTTCTCCTGGGTTCCCTTCCCAGGAAGCAATGTTGCCCT-----------GGGGTGGGGGCAGCAGGATTGCAGGGCAAAAAGAGTAGGAGAAGGACCTCACATCCAGGGTAAGGGGCTATCTACCTCGAAAGGGCCAGTAAGGAACATCTGGGGAAGGAGACCAGAGGCCCTTTGTGACTCCCTCAGATTAGTTCCATGTGTAGGTAGAGCTCCAACCTGAAAACCCAGCAAGGAATTGGACTGGGGTCAGGGAAGCAGTGGCAGGGACCTGTGGCCCAGCCAATTCATGGATCAGCCTTGCCCGGCCCGGGGTCTGCTTGCACCAAGGAATGTGTGCAGTGGCAGgaaagctgttctccatactgatca-gaaatctg---cctcctggaatgtctttccttgggcctgcttctgATGGCCGTCC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76049411 501 - 133410057 TGGAGTCCTCGGCCTCCTCCTAGAAGAACTTGTCTTCATGGACCCAATCATACATTCCCAGGAGCCAATGAAG----AGAACTTGAACTC--TGCCTTCTCCTGGGTTCCCTTCCCAGGAAGCAATCTTGCCCT-----------GGGGTGGAGGCAGCAGGACTGCAGGGCAAAAAGAGTAGGGGAAGGACCTCACATCCAGGGTAAGGGGCTATCTACCTCGAAAGGGCCAGTAAGGAACATCTGGGGAAGGAGACCAGAGGCCCTTTGTGACTCCCCCAGATTAGTTCTGTGTGTAGGTGGAGCTCCAGCCTGAAAACCCAGCAAGGAATTGGACTGGGGTCAGGGAGGCAGTGGCAGGGACCTGTGGCCCAGCCAATTAATGGACCAGCCTTGCCCGGCCCGGGGTCTGCTTGCACCACGGAATGTGTGCAGTGCCAGGGAAGCTGTTCTCCATACTGATCA-GAAATCTG---CCTCCTGGAATGTCTTTCCTTGGGCCTGCTCCTGATGGCCGTCC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34991786 501 + 104879549 TGGAGTCCTCGGCCTCCTCCCAGAAGAACTTGTCTTCATGAACCCAAAAGTACATTCCCAGGAGCCAATGAAC----AGAACTTGAACTCTTTGTCTTCTCCTGGGTTCCCTTCCCAGGAAGCAATCTTGCCCT-----------GGGGTGGGGGCAGCAGGACTGCAGGGCAAAAAGAGTAGGGGAAGGACCTCACATCCAGGGTATGGGGCTATCTACCACGAAATAGCCAGTAAGGGACATTTGGGGAAGGAGACCAGAGACCCTTTGTGACTCCCCCAGATTAGTTCCGTGTGTAGGTGGAGCTCCAACCTGAAAACCCAGCAAGGAATTGGACTGGGGTCAGGGAGGCAGTGGCAGGGA-CTGTGGCTCAGCCAATTCATGGACCAGCCTTGCCCGG-CCAGGATCTGCTTGCACCACGGAATGTGTGCAGTGGCAGGGAAGCTGTTCTCCATGCTGATCA-GAAATCTG---CCTCCTGGAATGTCTTTCCTTGGGCCTGCTTCTGATGGCCGTCC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73785378 511 - 130959383 TGGAGTCCTCAGCCTCCCCCCAGAAGAACTTGTCTTCATGGACCCAAACATACATTCCCAGCAG-CAATGAAG----AGAACTTGAAATC--TGCCTTCTCCTGGGTTCCCTTCCCAGGAAGCAATCTTGCCCTGGGGTGGGGCAGGGGTGGGGGCAGCAGGACTGCAAGGCAAAAAGAGTAGGGGAAGGACCTCACATCCAGGGTGAGGGGCTATCTACCTCGAAAGAGCCAGCAAGGAACATCTGGGGAAGGAGAGCAGAGGCCCTTTGTGACTCTCCCAGATTATTTCTGTGTGTAGGTGGAGCTCCAACCTGAAAACCCAGCAAGGAATTGGACTGGGGTCAGGGAGGCAGTGGCAGGAAACTGTGGCCCAGCCAATTCATGGACCAGTCTTACCCGGCCCGGGGTCTGCTTGCACCACGGAATGTGTGCAGTGGCAGGGAAGCTGTTCTCCATACTGATCA-GAAGTCTG---CCTCCTGGAATGTCTTTCCTTGGGCCTGCTTCTGAAGGCCGTCC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75347549 511 - 133195287 TGGAGTCCTCAGCCTCCCCCCAGAAGAACTTGTCTTCATGGACCCAAACATACATTCCCAGCAG-CAATGAAG----AGAACTTGAAATC--TGCCTTCTCCTGGGTTCCCTTCCCAGGAAGCAATCTTGCCCTGGGGTGGGGCAGGGGTGGGGGCAGCAGGACTGCAAGGCAAAAAGAGTAGGGGAAGGACCTCACATCCAGGGTGAGGGGCTATCTACCTCGAAAGAGCCAGCAAGGAACATCTGGGGAAGGAGAGCAGAGGCCCTTTGTGACTCTCCCAGATTATTTCTGTGTGTAGGTGGAGCTCCAACCTGAAAACCCAGCAAGGAATTGGACTGGGGTCAGGGAGGCAGTGGCAGGAAACTGTGGCCCAGCCAATTCATGGACCAGCTTTACCCGGCCCGGGGTCTGCTTGCACCACGGAATGTGTGCAGTGGCAGGGAAGCTGTTCTCCATACTGATCA-GAAGTCTG---CCTCCTGGAATGTCTTTCCTTGGGCCTGCTTCTGAAGGCCGTCC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73211609 511 - 125196307 TGGagtcctcagcctcctcccagaaGAACTTGTCTTCATGGACCCAAAcatacattcccagcag-caatgaAG----AGAACTTGAACTC--TGCCTTCTCCTGGGTTCCCTTCCCAGGAAGCAATCTTgccctggggtggggcaggggtgggggcagcaggaCTGCAAGGCAAAAAGAGTAGGGGAAGGACCTCACATCCAGGGTGAGGGGCTATCTACCTCGAAAGAGCCAGCAAGGAACATCTGGGGAAGGAGAGCAGAGGCCCTTTGTGACTCTCTCAGATTATTTCTGTGTGTAGGTGGAGCTCCAACCTGAAAACCCAGCAAGGAATTGGACTGGGGTCAGGGAGGCAGTGGCAGGAAACTGTGGCCCAGCCAATTCATGGACCAGCCTTACCCAGCCCGGGGTCTGCTTGCACCACGGAATGTGTGCAGTGGCAGGGAAGCTGTTCTCCATACTGATCA-GAAGTCTG---CCTCCTGGAATGTCTTTCCTTGGGCCTGCTTCTGAAGGCCGTCC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72043971 510 - 125710982 TGGAGTCCTCAGCCTTCTCCCAGAAGAACTTGTCTTCATGGACCCAAACATACATTCCCAGCAGCCAATGAAG----AGAACTTGAACTC--TGCCTTCTCCTGGGTTCCCTTCCCAGGAAGCAATCTTGCCCTGGGGTGGGGCAGGGGTGGGGGCAGCAAGACTGCAAGGCAAAAAGAGTAGGGGAAGGACCTCACATCCAGGGTGAGGGGCTATCTACCTTGAAAGAGCCAGCAAGGAACATCTGGGGAAGGAAAGCAGAGGCCCTCTGTGACTCTCCCAGATTATTTCTGTGTGTAGGTGGAGCTCCAACCTGAAAACCCAGCAAGGAATTGGACTGGGGTCAGGGAGGCAGTGGCAGGGAAC--TGGCCCAGCCAATTCATGGACCAGCCTTACCCGGCCCGGGGTCTGCTTGCACCACGGAATGTGTGCAGTGGCAGggaagctgttctccatactgatca-gaaatctg---cctcctggaatgtctttccttgggcctgcttctgAAGGCCATCC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75506401 519 - 121768101 TGGAGTCCTCAGCGTCCTCTCAGCAGAAGCTGTCGTCATGGACGCAATCATAcattaataggagccaatgaagagaaagaacttgaactc--tgccttctcctggGTTCCCTTCCCAGGAAGTAATCCTGCCCTGGGGTGGAGCGCAGCTGGGAGCAGCAAGACTGCAGGGCAAAAAGGGTAGGGGAAGGACCTCATATCCAGGATGAGGGACTATCTACCTCAAAAGAGCCAGCAAGGAACATGTGGGGCAGAAGCCCAGAGGCCCTTTGTGACATCCCCAGATGAGTTCCGTGTGTAGGTGGAGCTCCAACCTGAAAACCCAGCAAGGAATTGGACTGGAGCCA-GGAGGGAGTACCAGGGAGCTGTGGCCCAGCCCATTCATGGCCCAGCTTCACCTGGCCTGTGGTCTGCTTGTACCATGGAATGCGTGCAGTGGCAGGGAAGCTGTTCTCCATAATGATCACAAAAACTGACACCTCCTGGAATGGCTTTCTTTGGGCCTGCTTCTGATGACCGTCT i calJac3.chr12 C 0 C 0 e canFam3.chr4 27672845 123 + 88276631 I e mm10.chr14 24093499 39790 + 124902244 I a score=2185606.000000 s hg38.chr10_KI270825v1_alt 11503 964 + 188315 AGATAtgtagggtccagccctatgggg-cttagcgggtgttctccccgtgtgcagagacaagagattgtaataaat-gaaggcacaagacaaagagataaagagaaagcagctgggcccgggggaccactaccatcaagacatggagaccggtagtggccccgaacagctgggctcgctgatatttattgcacacaagacaagggggcagggtaaggagggtgaatcttctaagtgattgacaaggtgaagcaagtcacgtgattacaggataggcgggcccttcccttttaggtagccaaagcagagagagaaggcagcatatgacagcgttttc-tgttcacacgtacaagaaagatcaaagacttt---actttcactatttcttctaccgctatctactacgaacttcaaagaggaaccaggagtacgggaggagcatgaaagtggacaaggagtgtgaccattgaagcacagcaccacagggaggggtttaggcctctggatgactgaaggcaggcctggataatatccagccttccacaagaagctggtggagcagagtgttccctgactcctctaaggaaaggagactccctttcacggtctgctaagtaacgg-tgccttcccagacactggcgttaccacttgaccaaggagccctcaagcagcccttatgcaggcgtgacagaaggctca--cctcttgccttctagatcacttctcaca----------------atgtcccttaagcacctgaccctatacccaccggttattcctaggttatattagtaatgcaacaaagagtaatattaaaagctaatgattaatgttg---ataataatgattgataattgttcatgatcatctctgtatctaatttgtattatgactattcttattctaactattttctttattatactgaaacagtttgtgccttcagtctcttgcctcagcacctaggtaatcctccgcccaca s panTro4.chr10 76382114 966 + 133524379 AGATAtgtagggtccagccctatgggggcttagcgggtgttctccccgtgtgcagagacaagagattgtaataaat-aaaggcacaagacaaagagataaagagaaagcagctgggcccgggggaccactaccatcaagacatggagaccggtagtggccccgaacagctgggctcgctgatatttattgcacacaagacaagggggcagggtaaggagggtgaatcttctaagtgattgacaaggtgaagcaagtcacgtgattacaggataggcgggcccttcccttttaggtagccaaagcagagagagaaggcagcatatgacagcgttttc-tgttcacacgtacaagaaagatcaaagacttt---acttttactatttcttctaccgctatctactaggaacttcaaagaggaaccaggagtacgggaggagcatgaaagtggacaaggagtgtgaccattgaagcacagcaccacagggaggggtttaggcctccggatgactgagggcaggcctggataatatccagccttccacaagaagctggtggagcagagtgttccctgactcctccaaggaaaggagactcccttttgcagtctgctaagtaacgggtgccttcccagacactggcgttaccacttgaccaaggagccctcaagcagcccttatgcgggcgtgacagaaggctca--cctcttgccttctaggtcacttctcaca----------------atgtcccttaagcacctgaccctatacccaccggttattcctaggttatattagtaatgcaacaaagagtaatattaaaagctaatgattaatgttg---ataataatgattgataattgttcatgatcatctctgtatctaatttgtattatgactattcttattctaactattttctttattatactgaaacagtttgtgccttcagtctcttgcctcagcacctaggtaatcctccgcccaca i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76049912 964 - 133410057 AGATAtgtagggtccagccccacgggg-cttagcgggtgttctccccgtgtgcagagacaagatattgtaataaat-aaaggcagaagacaaagagataaagagaaagcagctgggcccgggggaccactaccatcaagacgcggagaccggtagtggtcccgaacagctgggctcgctgatatttattgcatacaagacaagggggcagggtaaggagggtgaatcttctaagtgattgacaaggtgaagcaagtcacgtgattacaggataggcgggcccttcccttttagatagccaaagcagacagagaaggcagcatatgacagcattttc-tgttcacatgtacaagaaagatcaaagac--t---actttcactatttcttataccgctatctactacaaacttcaaagaggaaccaggagtacaggaggagcatgaaagtggacaaggagcgtgaccattgaagcacagcaccacagggaggggtttaggcctccggatgactgagggcaggcctggataatatccagccttccacaagaagctggtggagc--agtgttccctgactcctct-----aaggagactccctttcacggtctgctaagtaacgg-tgccttcccagacactggcgttatcacttgaccaaggagccctcaagcagcccttatgcgggtgtgacagaaggctca--cctcttgccttctaggtcacttctcacctgaccctagggaccctaggtcccttaagcacctgaccctatgcccaccggttattcctaggttatattagtaatgcaacaaagagtaatattaaaagctaatgattaatgttg---ataa-------tgataattgttcatgatcatctctatatctaatttgtattatgactattcttattctaactattttctttattatactgaaacagtttgtgccttcagtctcttgcctcggcaccgaggtaatcctccgcccaca i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34992287 959 + 104879549 AGATAtgtagggtccagccctacaggg-cttagtgggtgttctccccgtgtgcagagacgagagattgtaataaat-aaaggcacaagacaaagagataaggagaaagcagctgggcccaggggaccactaccgtcaagacgcagagaccggcagcggccccgaacagctgggctcgttgatatttattgcatacaagacaagggggcagggtaaggagggtgaatcttctaagtgatttacaaggtgaagcaagtcacgtgattacaggataggcgggcccttcccttttaggtagccaaagcaaagacagaaggcagcatatgacagcgttttcttgtccgcacgtacaagaaagatcaaagacttt---actttcactatttcttctaccgctatctactacgaacttcaaagaggaaccaggagtactggaggagcatgaaagtggacaaggagcatgaccattaaagcacagcaccacagggaggggtttaggcctccagatgactgtgggcaggcctggataatatccagccttccacaagaagttggtggagcagagtgttccctgactcctctaaggaaaggagactccctttcacggtctgctaagtaacgg-tgccttcacagacactggcgttaccacttgaccaacgagccctcaagcagcccttatgcaggtgtgacagaaggctca--cctcttgccttctaggtcacttctcaca----------------atgtcccttcagcacctgaccctatacccaccggttattcctaggttatattagtaatgcaacaaagagtagtattaaaagctaatgattaataatg---ttgataatgattgataattgttcatgatcatctctatatctaatttgtattatgac------tattctaactattttctttattatactgaaacagtttgtgccttaagtctcttgcctcggcacctaggtaatcctccgcctaca i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73785889 954 - 130959383 AGATAtgtagggtccagccctacaggg-cttagcggatattctccccatgtgcggagatgagagattgtaataaataaaaggcacatgacaaagagataaagagaaagcagctgggcctgggggatcactaccatcaagacgcagagatc-gtagtggcccggaacatctgggctcgctgatatttactgcatacaagacaagggggcagggtaaggagggtgaatcttctaagtgattgacaaggtgatgcaagtcatgtgattacaggata-gtgcgcccttcccttttaagtagctgaagcag----aaaagtcagcacacaacagcgttttcttctccgcacttacaagaaacatcaaagactttaagactttcactatttcttccactgctatctactacaaacttcaaagaggaaccaggagtatgggaggagcattaaagtggacaaggagtgtgaccattgaagcacagcaccacagggaggggtttaggcctccggatgactgcggacaggcctggataatat---------------aagctggtggagcagagcgttccctgactcctccaaggaaaggagactgtctttcgcggtctgctaagtaacgggtgcccccccagacactggcattatcgcttgatcaagaagccctcaagcggcccttatgcgggtgtgacagaaggctcacccctcttgccttctaggtcacttttcaca----------------atgtcccttcagcacctgaccctatacccaccggttattaataggttatattaggaatgcaacaaagagtaatattaaaaggtaattattaataatgtttataatagtgattgataattgttcatgatcatctctatatctaatttgtattataactagtcttattctaacaattttctttattatactgaaacagtttgtgccttcagtctctttcctcggcacctaggtaatcctccgcccaca i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75348060 954 - 133195287 AGATAtgtagggtccagccctacaggg-cttagcggatattctccccatgtgcggagatgagagattgtaataaataaaaggcacatgacaaagagataaagagaaagcagctgggcctgggggaccactaccatcaagacgcagagatc-gtagtggcccggaacatctgggctcgctgatatttactgcatacaagacaagggggcagggtaaggagggtgaatcttctaagtgattgacaaggtgatgcaagtcatgtgattacaggata-gtgcgcccttcccttttaagtagctgaagcag----aaaagtcagcacacaacagcgttttcttctccgcacttacaagaaagatcaaagactttaagactttcactatttcttccactgctatctactacaaacttcaaagaggaaccaggagtacgggaggagcattaaagtggacaaggagtgtgaccattgaagcacagcaccacagggaggggtttaggcctccggatgactgcggacaggcctggataatat---------------aagctggtggagcagagcgttccctgactcctccaaggaaaggagactgtctttcgcagtctgctaagtaacgggtgccctcccagacactggcattatcgcttgaccaagaagccctcaagcggcccttatgcgggtgtgacagaaggctcacccctcttgccttctaggtcacttttcaca----------------atgtcccttcagcacctgaccctatacccaccggttattcctaggttatattagtaatgcaacaaagagtaatattaaaagctaattattaataatgtttataatagtgattgataattgttcatgatcatctctatatctaatttgtattataactattcttattctaacaattttctttattatactgaaacagtttgtgccttcagtctcttgcctcggcacctaggtaatcctccgcccaca i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73212120 953 - 125196307 AGATatgtagggtccagccctacaGGG-CTTAGCGGATATTCTCCCCATATGCAGAGATGAGAGATTGTAATAAAT-AAAGGCACAtgacaaagagataaagagaaagcagctgggcctgggggaccACTACCATCAATACGCAGAGATC-GTAGTGGCCCGGAACATCTGGGCTCGCTGATATTTACTGCATACAagacaagggggcagggtaaggagggtgaATCTTCTAAGTGATTGACAAGGTGATGCAAGTCATGTGATTACAGGATA-GTGCACCCTTCCCTTTTAAGTAGCCGAAGCAG----AAAAGTCAGCACACAACAGCGTTTTCTTCTCCGCACTTAcaagaaagatcaaagactttaagactttcactatttcttcCACTGCTATCTACTACaaacttcaaagaggaaccaggagtacGGGAGGAGcatgaaagtggacaaggagTGTGACCATTGAAGCACATCACCACGGGGAGGGGTTTAGGCCTCTGGATGACTGAGGACAGGCCTGGATAATAT---------------AAGCTGGTGGAGCAGAGcgttccctgactcctccaaggaaaggagactgTCTTTCGCggtctgctaagtaacgggtGCCCTCCCAGACACTGGCATTATCGCTTGACCAAGAAGCCCTCAAGCGGCCCTTATGCGGGTGTGACAGAAGGCTCACCCCTCTTGCCTTCTAGGTCACTTTtcaca----------------atgtcccttcagcacctgaccctATACCCACCGGTTATTCCTAGGTTACGTTAGTAATGcaacaaagagtaatattaaaagctaattattaataatgtttataatagtGATTGATAATTGTTcatgatcatctctatatctaatttgtattataactattcttattctaacaattttctttattatactgaaacagtttgtgccttcagtctcttgtCTCGGCACCTAGGTAATCCTCCGCCCACA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72044481 953 - 125710982 AGATAtgtagggtccagccctacaggg-cttagcagatattccccccatgtgcggagatgagagattgtaataaat-aaaggcacatgacaaagagataaagagaaagcagctgggcctgggggaccactaccatcaagacacagagatc-gtagtggcccggaacatctgggctcgcagatatttactgcatacaagactagggggcagggtaaggagggtgaatcttctaagtgattgacaaggtgatgcaagtcacgtgattacaggata-gtgcgcccttcccttttaagtagccgaagcag----aacagtcagcacacaacagcgttttcttctccacacttacaagaaagatcaaagactttaagactttcactatttcttctgccgctatctactacaaacttcaaagaggaaccaggagtacgggaggagcatgaaagtggacaaggagtgtgaccattgaagcacatcaccacagggaggggtttaggcctccggatgactgcggacaggcctggataatat---------------aagctggtggagcagagtgttccctgactcctccagggaaaggagactgtttttcgcggtctgctaagtaacgggtgccctcccagacactggcgttatcgcttaaccaagaagccctcaagcggcccttatgcgggtgtgacagaaggctcacccctcttgccttctaggtcacttttcaca----------------atgtcccttcagcacctgaccctatacccactggttattcctaggttatgttagtaatgcaacaaagagtaatattgaaagctaattattaataatgtttataatagtgattgataattgttcatgatcatctctatatctaatttgtattataactattcttattctaacaattttctttattatactgaaacagtttgtgccttcagtctcttgcctcggcacctaggtaatcctccgcccaca i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27672845 123 + 88276631 I e mm10.chr14 24093499 39790 + 124902244 I e calJac3.chr12 75506920 0 - 121768101 C a score=3600.000000 s hg38.chr10_KI270825v1_alt 12467 1 + 188315 C s panTro4.chr10 76383080 1 + 133524379 C i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76050876 1 - 133410057 C i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34993246 1 + 104879549 C i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73786843 1 - 130959383 C i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75349014 1 - 133195287 C i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73213073 1 - 125196307 C i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72045434 1 - 125710982 C i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27672968 1 + 88276631 C i canFam3.chr4 I 123 C 0 e mm10.chr14 24093499 39790 + 124902244 I e calJac3.chr12 75506920 0 - 121768101 C a score=3213209.000000 s hg38.chr10_KI270825v1_alt 12468 993 + 188315 AGATATTTGAAGCCAGTGACACTGTCCTCCTAAAATGTCTCTGGATTTGCCGTCAGGATTTGCTGTA-GGATGTGTTTTGTAACTCAACCTGTGATCTGTCCTCCAAAGGACAGCCTCAGGAACGTGGGGAATCTGATCGCCTGTATCCTACCTCTGTGTGGGCAGAGGAGCTGCTTTTTGTGTTCAGGGTGATAATGCAttttcta----tttcatttaaattcactctcggccttct---ttccagattagta-gcaggcccagtgtctctcctgggaataccctagtccccttgagttgtcccaagaatcgctagaggtggctcagtcctgtt-------tcccc-ggggaaaggccaaacctctccattctcttggcgagagttaagaaccagccacaattgtaagctgccattgcttctg-------------------ctgcttccatagggtgttgctgctgacccactgatcccaaacaagaacagacattcttgcccacaaataggatggttttcatgatggttcagatccccactgaggtcATGGACGCACACTG---------AGCTGCTCTA--ATCTCGCCTTTTAGGCTCATCTACAGGGCCAGCTAGAGCCCTCGCCGCCATGTCATCTCCTTGGATAACCTTTCTTTGCAGTGGCCCTCAGCTGCAA-----AAGCCTAAGAACAAATCCAGAGGAAGCTGGCCTCCGAGGAGGAATGCACACGGAACCACCCTGTCTCCGGGGAGCTTGGAGTTTTAGTTTTGTCCAAG----------CTCGCAGGGCAAGGCTGCCCACTCATCTTGCGGAGGGACACAGC-TAAGAGGGGCTTTTGTGGAGGTTCTCCTCCAAGCAAAGATCCTGGTTTGGGCTCTGATCTACACACAAAAGTAGCAGGACC--------CTGCAGCTTTGTTGACAAAACATTTGGAAAATGCACCCATGCCACCAGGC--CACCTGCC------TATTTCTAGCA-ATCACTTCTGGTTGAATTCTTT-----AAAAAAAAAAAAA-----TCTTGAAAATAAGCCCTTAAAAGGTTGTTT s panTro4.chr10 76383081 1018 + 133524379 AGATATTTGAAGCCAGTGACACTGTCCCCCTAAAATGTCTCTGGATTTGCCGTCAGGATTTGCTGTA-GGATGTGTTTTGTAACTCAACCTGTGATCTGTCCTCCAAAGAACAGCCTCAGGAACGTGGGGAATCTGATCGCCTGTATCCTACCTCTGTGTGGGCAGAGGAGCTGCTTTTTGTGTTCAGGGTGATAATGCATTTTCTA----TTTCATTTAAATTCACTCTCGGCCTTCT---TTCCAGATTAGTA-GCAGGCCCAGTGTCTCTCCTGGGAATACCCTAGTCCCCTTGAGTTGTCCCAAGAATCGCTAGAGGTGGCTCAGTCCTGTT-------TTCCCTGGGGAAAGGCCAAACCTCTCCATTCTCTTGGTGAGAGTTAAGAACCAGCCGCAACTGTAAGCTGCCATTGCTTCTGTAAGCTGCCATTGCTTCTGCTGCTTCCATAGGGTGTTGCTGCTGACCCACTGATCCCAAACAAGAACAGACATTCTTGCCCACAAATAGGATGGTTTTCTTGATGGTTCAGATCCCCACTGAGGTCATGGACGCACACTG---------AGCTGCTCTA--ATCTCGTCTTTTAGGCTCATCTACAGGGCCAGCTAGAGCCCTCGCCGCCATGTCATCTCCCTGGATAACCTTTCTTTGCAGTGGCCCTCGGCTGCAA-----AAGCCTAAGAACAAATCCAGAGGAAGCTGGCCTCCGAGGAGGAATGCACACGGAACCACCCTGCCTCCGGGGAGCTTGGAGTTTTAGTTTTGTCCAAG----------CTCGCAGGGCAAGGCTGCCCACTCATCTTGCGGAGGGACACAGC-TAAGAGGGGCTTTTCTGGAGGTTCTCCTCCAAGCAAAGATCCTGGTTTGGGCTCTGATCTACACACAAAAGTAGCAGGACC--------CTGCAGCTTTGTTGACAAAACATTTGGAAAATGCACCCATGCCACCAGGC--CACCTGCC------TATTTCTAGCA-ATCACTTCTGGTTGAATTCttt-----aaaaaaaaaaaaaaaaattCTTGAAAATAAGCCCTTAAAAGGTTGTTT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76050877 991 - 133410057 AGATATTTGAAGCCAGTGACACTATCCCCCTAAAATGTCTCTGGATTTGCCATCAGGATTTGCTGTA-GGATGAGTTTTGTAACTCAATCTGTGATCTGTCCTCCAAAGGACAGCCTCAGGAACGTGGGGAATCTGATCGCCTGTATCCTACCTCTGTGTGGGCAGAGGAGCTGCTTTTTGTGTTCAGGGTGATAATGCAttttcta----tttcatttaaattcactctcggccttct---ttccagattagta-gcaggcccagtgtctctcctgggaacaccctagtccccttgagttgtcccaagaatcattagaggtggctcagtcctgtt-------tctcctggggaaaggccaaacctctccattctcttggcgagagttaagaaccag-cgcaattgtaagctgccattgcttctg-------------------ctgcttccatagggtgttgctgctgacccactgatcccaaacaagaacagacattcttgcccacaaataggatggttttcttgatggttcagatccccactgaggtcatggACACACACTG---------AGCTGCTCTA--ATCTCGTCTTTTAGGCTCATCTACAGGGCCAGCCAGAGCCCTCGCCACCATGTCATCTCCCTGGATAACCTTTCTTTGCAGTGGCCCTCAGCTGCAA-----AAGCCTAAGAACAAATCCAGAGGAAGCTGGCCTCCAAGGAGGAATGCACACGGAACCAGCCTGTCTCCAGGGAGCTTGGAG-TTTAGTTTTGTCCAAG----------CTCGCAGGGCGAGGATGCCCACTTATCTTGCAGAGGGACACAGC-TAAGAGGGGCTTTTCTGGAGGTTCTCCTCCAAGCAAGGATCCTGGTTTGGGCTCTGATCTACACACAAAAGTAGCAGGACC--------CTGCAGCTTTGTTGACAAAACATTTGGAAAATGCACCCATGCCACCACAC--CACCTGCC------TATTTCTAGAA-ATCACTTCTGGTTGAATTCTTT-----AAAAAAAAAAAT------TCTTGAAAATAAGCCCTTAAAAGGATGTTT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34993247 996 + 104879549 AGATATTTGAAACCAGTGACACTGTCCCCCTAAAATGTCTCTGGATTTGCCATCAGGATTTGCTGTA-GGATGAGTTTTGTAACTCGACCTGTGATCTGTCCTCCAAAGGACAGCCTCAGGAACGTGGGGAATCTGATCGCCTGTATCCTACCTCTGTGTGGGCAGAGGAGCTGCTTTTTGTGGTCAGGGTGATGATGCAttttcta----tttcatttaaattcactctcggccttct---ttccagattagca-gcaggcccagtgtctctcctgggaacaccctagtccccttgagttgtcccaagaatcactagaggtggctcagtcctgtt-------tcccctggggataggccaaacctctccattctcttggcgagagttaagaaccagccgcaattgtaagctgccattgcttctg-------------------ctgctgccatagggtgttgctgctgacccactgatcccaaacaagaacagacattcttgcccacaaataggatggttttcttgatggttcagatccccactgaggtcATGCACGCACACTG---------AGCTGCTCTA--ATCTCGTCTTTTAGGCTCATCTACAGGGCCAGCCAGAGCCCTCGCTGCCAAGTCATCTCCCTGGATAACCTTTTTTTGCAGTGGCCCTCGACTGCAA-----AAGCCTAAGAACAAATCTAGAGGAAGCTGGCCTCCGAGGAGGAATGCACAC-GAACCACCCTGTCTCTGGGGAGCTTGGAGTTTTAGTTTTGTCCCAG----------CTCGCAGGGCAAGGCTGCCCACTCATCTTGCAGAGGGACACAGC-TAAGAGGGAATTTTCTGGAGGTTCTCCTCCAAGCAAAGATCCTGGTTTGGGCTCTGACCTACACACAAAAGTAGCAGGACC--------CTGCAGCTTTGTTGACAAAACATTTGAAAAATGCACCCATGCCACCAGGC--CACCTGCC------TATTTCTAGCA-ATCACCTCTGGTTGAATTCTTA-----AAAAAAAAAAAAAAAT--TCTTGAAAATAAGCCCTTAAAAGGATGTTT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73786844 996 - 130959383 AGATATTTGAAGCCAGTGACACTGTCCCCCTAAAATGTCTCTGGATTTGCCGTCAGGGTTTGCTGTA-GTCTGAGTTTTGTAACTTAACCTGTGATCTGTCCTCCAAAGGACAGCCTCAGGAACGTGGGGAATCTGATCGCCTGTATCCTACCTCTGTGTGAGCAGAGGAGCTGCTTTTTGTGGTCAGAGTGATAATGCATTTTCTA----TTTCATTTAAATGGACTCTCGGCCTTCT---TTccagattagta-gcaggcccagtgtctctcctgggaacaccctagtccccttgggttgtcccaagaatcgctagaagtggctcagtcctgtt-------tcccctggggaaagtccaaacctctccattctcttggtgagagttaagaaccagccacaattgtaagctgccattgcttctg-------------------ctgcttccatagggtgttgctgccaacccactgatcccaaacaagaacagacattcttgcccacaaatagggtggtgttcttgatggttcagatccccactaaggtcATGGACACACACCG---------AGCTGCTCTA--ATCTCACCTTTTAGGCTCATCTATGGGGCCAGCCAGAGCCCTCGCGGTCATGTCATCTCCCTGGATAACCTTTCTTTGCAGTGGCCCTCGGCTGCAA-----AAGCCTAAGAACAAATCCAGAGGAAGCTGGCCTCCCAGGAGGAATGCACATGGAACCACCCTGTATCCTGGGAGCTTGGAGTTTTCGTTTTGTCCAAG----------ctcgcagggcaaggctgcccactcatcttgcagagggacacagc-tacgaggggcttctctggaggttctcctccaagcaaagatcctggtttgggctccgatctacacacagaagtagcaggacc--------ctgcagctttgttgacaaaacatttgaaAAATGCACCCATGCCACCAGGC--CACCTGCC------TGTTTCTAGTA-ATCACTTCTGGTTGAATTCTTT------AAAAAAAAAAAAAAT--TCTTGAAAATAAGCCCTTAAAACGATGTTT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75349015 1000 - 133195287 AGATATTTGAAGCCAGTGACACTGTCCCCCTAAAATGTCTCTGGATTTGCCGTCAGGGTTTGCTGTA-GTCTGAGTTTTGTAACTTAACCTGTGATCTGTCCTCCAAAGGACAGCCTCAGGAACGTGGGGAATCTGATCGCCTGTATCCTACCTCTGTGTGAGCAGAGGAGCTGCTTTTTGTGGTCAGAGTGATAATGCATTTTCTA----TTTCATTTAAATGGACTCTCGGCCTTCT---TTCCAGATTAGTA-GCAGGCCCAGTGTCTCTCCTGGGAACACCCTAGTCCCCTTGGGTTGTCCCAAGAATCGCTAGAAGTGGCTCAGTCCTGTT-------TCCCCTGGGGAAAGTCCAAACCTCTCCATTCTCTTGGTGAGAGTTAAGAACCAGCCACAATTGTAAGCTGCCATTGCTTCTG-------------------CTGCTTCCATAGGGTGTTGCTGCCAACCCACTGATCCCAAACAAGAACAGACATTCTTGCCCACAAATAGGGTGGTGTTCTTGATGGTTCAGATCCCCACTAAGGTCATGGACACACACCG---------AGCTGCTCTA--ATCTCATCTTTTAGGCTCATCTATGGGGCCAGCCAGAGCCCTCGCGGTCATGTCATCTCCCTGGATAACCTTTCTTTGCAGTGGCCCTCGGCTGCAA-----AAGCCTAAGAACAAATCCAGAGGAAGCTGGCCTCCCAGGAGGAATGCACATGGAACCACCCTGTATCCTGGGAGCTTGGAGTTTTCGTTTTGTCCAAG----------CTCGCAGGGCAAGGCTGCCCACTCATCTTGCAGAGGGACACAGC-TACGAGGGGCTTCTCTGGAGGTTCTCCTCCAAGCAAAGATCCTGGTTTGGGCTCCGATCTACACACAGAAGTAGCAGGACC--------CTGCAGCTTTGTTGACAAAACATTTGAAAAATGCACCCATGCCACCAGGC--CACCTGCC------TGTTTCTAGTA-ATCACTTCTGGTTGAATTCTTT--aaaaaaaaaaaaaaaaaaT--TCTTGAAAATAAGCCCTTAAAACGATGTTT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73213074 991 - 125196307 AGATATTTGAAGCCAGTGACACTGTCCCCCTAAAATGTCTCTGGATTTGCCGTCAGGGTTTGCTGTA-GTCTGAGTTTTGTAACTTAACCTGTGATCTGTCCTGCAAAGGACAGCCTCAGGAACGTGGGGAATCTGATCGCCTGTATCCTACCTCTGTGTGAGCAGAGGAGCTGCTTTTTGTGGTCAGAGtgataatgcatttt-ta----tttcatttaaatggacTCTCggccttct---ttccagattagTA-GCAGGCCCAGTGTCTCTCCTGGGAACACCCTAGTCCCCTTGGGTTGTCCCAAGAATCACTAGAAGTGGCTCAGTCCTGTT-------TCCCCTGGGGAAAGTCCAAACCTCTCCATTCTCTTGGTGACAGTTAAGAACCAGCCACAATTGTAAGCTGCCATTGCTTCAG-------------------CTGCTTCCATAGGGTGTTGCTGCCAACCCACTGATCCCAAACAAGAACAGACATTCTTGCCCACAAATAGGGTGGTGTTCTTGATGGTTCAGATCCCCACTAAGGTCATGGACACACACCG---------AGCTGCTCTA--ATCTCATCTTTTAGGCTCATCTATGGGGCCAGCCAGAGCCCTTGCGGTCATGTCATCTCCCTGGATAACCTTTCTTTGCAGTGGCCCTCGGCTGCAA-----AAGCCTAAGAACAAATCCAGAGGAAG-TGGCCTCCCAGGAGGAATGCACATGGAACCACCCTGTATCCT----GCTTGGAGTTTTCATTTTGTCCAAG----------CTCGCAGGGCAAGGCTGCCCACTCATCTTGCAGAGGGACACAGC-TATGAGGGGCTTCTCTGGAGGTTCTCCTCCAAGCAAAGATCCTGGTTTGGGCTCCGATCTACACACAGAAGTAGCAGGACC--------CTGCAGCTTTGTtgacaaaacatttgaaaaatgcaCCCATGCCACCAGGC--CACCTGCC------TGTTTCTAGTA-ATCACTTCTGgttgaattcttt-----aaaaaaaaaaaaaaat--tcttgaaaataagCCCTTTAAAGGATGTTT i papAnu2.chr9 C 0 I 321 s chlSab2.chr9 72045435 1002 - 125710982 AGATATTTGAAGCCAGTGACACTGTCCCCCTAAAATGTCTCCGGATTTGCCGTCAGGGTTTGCTGTA-GTCTGAGTTTTGTAACTTAACCTGTGATCTGTCCTCCAAAGGACAGCCTCAGGAACGTGGGGAATCTGATCGCCTGTATCCTACCTCTGTGTGAGCAGAGGAGCTGCTTTTTGTGGTCAGAGTGATACTGCATTTTCTA----TTTCATTTAAATTGACTCTCGGCCTTCT---TTCCAGATTAGTA-GCAGGCCCAGTGTCTCTCCTGAAAACACCCTAGTCCCCTTGGGTTGTCCCAAGAATCACTAGAAGTGGCTCAGTCCTGTT-------TCCCCTGGGGAAAGTCCAAACCTTTCCATTCTCTTGGTGAGAGTTAAGAACCAGCCACAATTGTAAGCTACCATTGCTCCTG-------------------CTGCTTCCATAGGGTGTTGCTGCCAACCCACCGATCCCAAACAAGAACAGACATTCTTGCCCACAAATAGGATGGTGTTCTTGATGGTTCAGATCCCCACTAAGGTCATGGACACACACCG---------AGCTGCTCTA--ATCTCGTCTTTTAGGCTCATCTATGGGGCCAGCCAGAGCCCTCGCGGTCATGTCATCTCCCTGGATAACCTTTATTTGCAGTGGCCCTCGGCTGCAA-----AAGCCTAAGAACAAATCCAGAGGAAGCTGGCCTCCCAGGAGGAATGCACATAGAACCACCCTGTATCCTGGGAGCTTGGAGTTTTCGTTTTGTCCAAG----------CTCGCAGGGCAAGGCTGCCCACTCATCTTGCAGAGGGACACAGC-TACGAGGGGCTTCTCTGGAGGTTCTCCTCCAAGCAAAGATCCTGGTTTGGGCTCCGATCTACACACAGAAGTAGGAGAACC--------CTGCAGCTTTGTTGACAAAACATTTGAAAAATGCACCCACGCCACCAGGC--CACCTGCC------TGTTTCTAGTA-ATCACTTCTGGTTGAATTCTTTaaaaaaaaaaaaaaaaaaaTT--TCTTGAAAATAAGCCCTTAAAAGGATGTTT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75506920 973 - 121768101 AGATATTTGAAGCCACTGACACTGTCCACCTAAAACGTCTCTGGATTCACCGTCAGGGTTTGCTGCA-GGCTGAGTTTTGTAACTTGGCCTGTGACCTGTCCTCCAAAGGACAGCTTCAGGTATGAAGGGAGTCTG------CGTTTCCTACCTCTGTGTGAGCGGAGGACCTGCTTTTTGAGGTCAGGGTGATAATGCATTTTCTA----TTTCATTTAAATCGACTCTTGGCCTTCT---GTCCAGATTAGTA-GCAGGCCCAGTGTCTCTTCCGGGAACACCTTAGTCCCCCTGAGTTGTCCCAAGAATTGCTAGAGGTGGCTCAGTCCTGTT-------TCTCCTGGGGAAATATCAAACCTCTCCATTCCCTGGGTGAGAGTT---AACCAGCCACAGTTGTTTGCTTCCCCTGCTGCTG-------------------CTGCTTCCATAGGATGCTGCTGCTGACCCACTGATCCCAAATGGAGACAGGCATTCCTGACCACAAATAGGATGGTGTTCTTGACGGTTCAGATCCCCACCGAGGTCGTGGATGCACACCG---------AGCTACTCTA--ATTTCATCTTTTAGGCTCATCTAAGGGGCCAGCCAGAGCCC-CGCCACCACGTCTTCTCCCTGGATCACCTTTCTTTGCAGGGGCTCTCGCCTGTAA-----AAGCCTAAGAACAAATCCAGAGGAAGCTGGCCT----GGAGGAATGCAGACAGAACCACTCTGTCTCCTGGGAGCTTGGAGTTTTCATTTTGTCCAAG----------CTTGCAGGGTCAGGCTGCCCACTAATCTTGCGGAGGGACACAGC-TAAGAGGAACTTCTCTGGAGGTTCTCTTCCAAACAAAGATCCTGGTTTGGGCTCCCATCTATACACAGAAGTAGCATGACC--------CTGCAGCTTTGTTGACAAAACATTTGAAAAATGCACCCAGGACACTA-GC--AACCTGCCTATGTATATTTCTGGCA-ATCATTCCTGGTTGAA---TTT-----------AAAAAAAAAT--TCTTGAAAATAA------AAAAAGATGCTT i calJac3.chr12 C 0 C 0 s canFam3.chr4 27672969 950 + 88276631 AGATATTGGAAGCGAGGCATCACGTGCCTCTTAAAGGTCTTTGGATTCATCCTCAGGGTCTGCCATGTGGCTGAAGTGTGCAATG------------------------------CTCAGGGA---------TCTGGCCGCCTGTCTCTTCCCTCTGTGTGAGCACTTGGCCTAC-TCCAGGGGTCAAGGTGACAGCACGTAGTGTGGTATTTTCATGTAGACCTACTCCTGATTTTCTGCCTTCTAGATTAATAGGCCAGCCCAGGATCTGTCCTGGGGA---------CTCCTTAGGCTGCCCC-AGACTCCCTGGAGGTTGCCCAG-CCTGTTGCTCTGGCCTCCTGGGGCAAGCAGCAAC------------------------GGGAACCAGCCGTAGCATTTTGCTGccattgcttcta-------------------ctgcttctatacagtgttgctgttggcct-ctgaccctgaacggtgagacacgctcttgcccacaaataggatggtgttcttgatggttcagatccccactagtgtcgcaagctggtgcTGTGATTCCGCAGATGCTCAACCACTTTGTCCCTCAGGATTCTCTCAGAGGCCAACCAGATTCCTCGCCATGACAACGCCTCCCTGGATGCCGTTTCTATGCGGTGGCCCTCAGCTGCCGGGGCTAAGGCTAAGCACTATTCCAAGGGAAACC-GCCTCCCCAGAGGAATGCACACTGAACTACCC--CTCCCCGGGAGCTGGGAG------TTGTGTTCGAGAACGTTTACCCCCATGAGGCAAGGTTGCCCATTCAGCTCACG--TGGACGCAGCTTAAGGGGGGCTTCTCAGGAGATCCTTCCGCAAGCGAAGAGCCT------GGCTCCCGCCTACCCACAGAGGTAGCAGGATCCTTGAAAACTGCAGCTTGGCTGGGAACACATTTGAAAACTACATCTAGTCCCCCAGGCAACACCTACAGGTCTTTATTTCTAGCAGGTCCCTTCTAGGTGAAGTCT-------------AAAAACATTT--TCTTGAAAGTGATTCCTTAAAGGG------ i canFam3.chr4 C 0 C 0 e mm10.chr14 24093499 39790 + 124902244 I a score=1258641.000000 s hg38.chr10_KI270825v1_alt 13461 410 + 188315 AAGAAGTCTAACTCTCTCACAGTCAACGGTACCCACTTTGGAAATGGGTCATCTCCCCTTCCTAACTGC-------------CCTGGGGGATGAGGGTAAGGGA----------TGATA----------------GGGCCCCTTGTGAGATGACATTTGAAGTATTTG-TGTCATTGTCCTAACAGAACAGATGC----CTG--TCTGCAGGACACTGACTGGGCCATAGTCACTCATGCATGTGTTCACAGTGTGGTCCATG----CACACCCCCTATCTGGCCCTTCCCTAACAGCTGCTG-CAACCCTGCCAGACTGCTGGAGGTGGAATTGGCCAGGCTGGCTATCTCAGGCCTCTAGCCATGGCATTAGCCAGTCAGCACAGACACAACCCCAAGGGTCCACATGCCC----AGGCAGACATAAGGTGGCTGGAAAGGCAGCTGCCCCTGCCCTAAGGAC s panTro4.chr10 76384099 410 + 133524379 AAGAAGTCTACCTCTCTCACAGTCAACGGTACCCACTTTGGAAATGGGTCATCTCCCCTTCCTAACTGC-------------CCTGGGGGATGAGGGTAAGGGA----------TGATA----------------GGGCCCCTTGTGAGATGACATTTGAAGTATTTG-TGTCATTGTCCTAACAGAACAGATGC----CTG--TCTGCAGGACACTGACTGGGCCATAGTCACTCATGCATGTGTTCACAGTGTGGTCCATG----CACACCCCCTATCTGGCCCTTCCCCAACAGCTGCTG-CAACCCTGCCAGACTGCTGGAGGTGGAATTGGCCAGGCTGGCTATCTCAGGCCTCTAGCCATGGCATTAGCCAGTCAGCACAGACACAACCCCAAGGGTCCACATGCCC----AGGCAGACATAAGGTGGCTGGAAAGGCAGCTGCCCCTGCCCTAAGGAC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76051868 401 - 133410057 AAGAAGTCTACCTCTCTCACAGTCAATGGTACCCACTTTGGAAATGGGTCATCTCTCCTTCCTAACTGC-------------CCTGGGGGATGAGCGTAAGGGA----------TGATA----------------GGGCCCCTTGTGAGATGAC---------ATTTG-TGTCATTGTCCTAACAGAACAGATGC----CTG--TCTGCAGGACACTGACTGGGCCATAGCCACTCATGCATGCGTTCACAGTGTGGTCCATG----CACACCCCTTATCTGGCCCTTCCCTAATGGCTGCTG-CAACCCTGCCAGCCTGCTGGAGGTGGAATTGGCCAGGCTGGCTATCTCAGGCCTCTAGCCATGGCATTAGCCAGTCAGCACAGACACAACCCCAAGGGTCCACATGCCC----AGGCAGACATAAGGTGGCTGGAAAGGCAGCTGCCCCTGCCCTAAGGAC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34994243 415 + 104879549 AAGAAGTCTACCTCTCTCACAGTCAACGGTACCCACTTTGGAAATGGGTCATCTTCCCTTCCTAACTGC-------------CCTGAGGGATGAGGGTAAGGGA----------TGATA----------------GGGCCCCTTGTGAGATGACATTTGAAGTATTTGTTGTCATTGTCCTAACAGAACAGATGCCTCTCTG--TCTGCAGGACACTGACTGGGCCATAGTCACTCATGCATATGTTCACAGTATGGTCCATG----CACACCCCCTATCTGGCCCTTCCCTAACGGCTGCTG-CAACCCTGCCAGCCTGCTGGAGGTGGAATTGGCCAGGCTGGCTATCTCAGGCCTCTCACCATGGCATTAGCCAGTCAGCACAGATACAACCCCAAGGGTCCACATGCCC----AGGCAGACATAAGGTGGCTGGAAAGGCAGCTCCCCCTGCCCTAAGGAC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73787840 414 - 130959383 AAGAAGTCTACCTCTCTCACAGTCAACAGGACCCACTTTGGAAATGGATCATCTCCCCTTCCTGACTGC-------------CCTGGGGGATGAGGGTAAGGGA----------TGATA----------------GGGCCCCTTGTGAGATGATGTTTGAAATATCTG-TGTCATTGTCCTAACAGAACAGATGCCTCTCTG--TCTGCAAGACACTTACTGGGCCATAGTCACTCATGCATGCATTCACAGTATGGTTCATG----CACACACCCTGTCTGGCCCTTCCCTAATGGCTGCAG-CAACCCTGCCAGCCTGCTGGAGGTGGCATTGGCCAGGCTGGCTATCTCAGGCCTCTAGCCATGGCATTAGCCAGTCAGCACAGACACAACCCCAAAGGTCCACATGTCC----AGGCAGACATAACGTGGCTGGAAAGGCAGCTGCCCCTGCCCTGAGAAC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75350015 414 - 133195287 AAGAAGTCTACCTCTCTCACAGTCAACAGTACCCACTTTGGAAATGGATCATCTCCCCTTCCTGACTGC-------------CCTGGGGGATGAGGGTAAGGGA----------TGATA----------------GGGCCCCTTGTGAGATGATGTTTGAAATATCTG-TGTCATTGTCCTAACAGAACAGATGCCTCTCTG--TCTGCAGGACACTTACTGGGCCATAGTCACTCATGCATGCATTCACAGTATGGTTCATG----CACACACCCTGTCTGGCCCTTCCCTAATGGCTGCAG-CAACCCTGCCAGCCTGCTGGAGGTGGCATTGGCCAGGCTGGCTATCTCAGGCCTCTAGCCATGGCATTAGCCAGTCAGCACAGACACAACCCCAAAGGTCCACATGTCC----AGGCAGACATAACGTGGCTGGAAAGGCAGCTGCCCCTGCCCTGAGAAC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73214386 414 - 125196307 aagaagtctaccTCTCTCACAGTCAACAGTACCCACTTTGGAAATGGATCATCTCCCCTTCCTGACTGC-------------CCTGGGGGATGAGGGTAAGGGA----------TGATA----------------GGGCCCCTTGTGAGATGATGTTTGAAATATCTG-TGTCATTGTTCTAACAGAACAGATGCCTCTCTG--TCTGCAGGACACTTACTGGGCCATAGTCACTCATGCATGCATTCACAGTATGGTTCATG----CACACACCCTGTCTGGCCCTTCCCTAATGGCTGCTG-CAACCCTTCCAGCCTGCTGGAGGtggcattggccaggctggctatCTCAGGCCTCTAGCCATGGCATTAGCCAGTCAGCACAGACACAACCCCAAAGGTCCACATGTCC----AGGCAGACATAACATGGCTGGAAAGGCAGCTGCCCCTGCCCTGAGAAC i papAnu2.chr9 I 321 C 0 s chlSab2.chr9 72046437 414 - 125710982 AAGAAGTCTATCTCTCTCACAGTCAACAGTACCCACTTTGGAAATGGATCATCTCCCCTTCCTGACTGC-------------CCTGGGGGATGAGGGTAAGGGA----------TGATA----------------GGGCCCCTTGTGAGACGATGTTTGAAATATCTG-TGTCATTGTCCTAACAGAACAGATGCCTCTCTG--TCTGCAGGACACTTACTGGGCCATAGTCACTCATGCATGCATTCACAGTATGGTTCATG----CACACACCCTGTCTGGCCCTTTCCTAATGGCTGCTG-CAACCCTGCCAGCCTGCTGGAGGTGGCATTGGCCAGGCTGGCTATCTCAGGCCTCTAGCCATGACATTAGCCAGTCAGCACAGACACAACCCCAAAGGTCCACATGTCC----AGGCAGACATAACGTGGCTGGAAAGGCAGCTGCCCCTGTCCTGAGAAC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75507893 312 - 121768101 AAAAAGTCTATGTCTCTCACAGTCAATGGTAACCACTTTGGAAGTGGGTCACCTCCCCTTGCTAACTGC-------------CCTGGGGGATGAGGGTAAGGGA----------TGATA----------------GGGCCCCCTGTGAGAGGACATTTGAAGTATTTG-TGCCATTGTCCTAACAGAACAGATGC----CTG--TCTGCAGGG------------------CACGCGTGCATGCATTGACAGTGTGGTTC----------------------------------------------------------------------------------------TCTCAGGCTTCTAGTCATGGCATTAGCCAGTCAGCACAGACACAGCCCCAAGGGTCCACATGCCCTC-TAGGCAGACATAAGGTGGCTGGAAAGGCAGCTGCCCCTGCACTAAGGAC i calJac3.chr12 C 0 C 0 s canFam3.chr4 27673919 445 + 88276631 ----------AATCTCTTACAGTCAACAGTGTCCACTGTGGAAACAGACGGCCCCCCAATCCTGCCTGTAGGGTATGGGGAGCCGAGGGGGCGGGAGGAAGAAGGCACCACGTTTGGCAAGTTCCCAAAACTGAGGAACCTCCCATGAGATGACATCTTAAGTACTGG-TGTCCTTGTCCTAACTGAACAGATGCCTCCCTGTATCTGCAG-------ATTGGGCCACAAGTAGGAGTCAGTAGGGTCATGGTATAGTAAGGGGTCCCACAC-CCCTGACTGGTCCTGCCCCCGTGGCTGATGCCAGCCTCGCCGCTACGTTGAAGTGGACAATGGCAAGGCTGGCTGCCTCAAGCCTCCAGCTGGGGCATAAACGAGTCAGCACAGAGACTGTCCCCAGGGCTCACATGCCCTCTTGGGAGGGTAT-AGGAGGCTAGAAAGGCAGGTGCTCCTGCCCTAAGGAC i canFam3.chr4 C 0 C 0 e mm10.chr14 24093499 39790 + 124902244 I a score=1227625.000000 s hg38.chr10_KI270825v1_alt 13871 422 + 188315 tgttagtccaaactgcaccattctgtaaacaccctcca--------------cccatacccctgcatttcacagatcttggttaaagtgaaacattccatgggggtttgggccatgagaaacagcctgaccaaccacctgactttcttacattctgctgtaaaaaagtacaaagaacatcacattcagccagaacaagggccaaaccacctcatcgtgggaacatgttatcaaccttttcccaggcaacatgctccccaagatccctcctgcccagggttataattgccccagcctgtaagcagtggtgagcact--ggcattaagctggtcccccatctctgcaggtctcatgctgaacatagaacctgcattgctgtagagccgccgactcc----ctttctttaaccctcgccttcccttt---aaaaaacctaaTGAGGAT s panTro4.chr10 76384509 422 + 133524379 tgttagtccaaactgcaccattctgtaaacaccctcca--------------cccatactcctgcatttcacagatcttggttaaagtgaaacattccatgggggtttgggccatgagaaacagcctgaccaaccacctgactttcttacattctgctgtaaaaaagtacaaagaacatcacattcagccagaacacgggccaaaccacctcatcgtgggaacatgttatcaaccttttcccaggcaacatgctccccaagatccctcccgcccagggctataattgccccagcctgtaagcagtggtgagcact--ggcattaagctggtcccccatctctgcaggtcttatgctgaacatagaacctgcattgctgtagagccgccgactcc----ctttctttaaccctcgccttcccttt---aaaaaacctaaTGAGGAT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76052269 429 - 133410057 tgttagttcaaactgaaccattctgtaaacacccccca--------------cccatacccctgcatttcacagatcttagttaaagtgaaacattccatgggggtttgggccatgagaaacagcctgaccaaccacctgactttcttacattctgctgtaaaaaagtacaaagaacatcacattcagccagaacaagggccaaaccacctcatcgtgggaacatgttatcaaccttttcccaggcaacatgctccccaagatccctccctcccagggctataattgccccagcctgtaagcagcggtgagcact--ggcattaagctggtcccccacctctgcaggtcttatgctgaacacagaacctgcattgctgtagagccgccgactccctctctttctttaaccctcgacttccctttgaaaaaaaacctaaTGAGAAT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34994658 422 + 104879549 tgttagtccaaactgcaccattctgtaaacaccccccg--------------cccatactcctgcatttcacacatcttggttaaagtgaaacattccatgggggtttgggccatgagaaacagcctgaccaaccacctgactttcttacattttgctgcaaaaaagtacaaagaacatcacattcagccagaacaagggccaaaccaccgcattgtgggaacatgttatcaaccttttcccaggcaacatggtccccaagatccctcccacccagggctataattgccccagcctgtaagcagcggtgagcact--ggcattaagatggtcccccacctctgcaggtcttatgctgaacatagaacctgcattgctgtagagccgccgactct----ctttctttaaccctcaccttcccttt---aaaaaacctaaAGAGGAT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73788254 424 - 130959383 tgttagtccaaactgcaccattctgtaaacgcaccc----------------accatacccctgcatttcacagatcttggttaaagtaaaacattccatggggggttgggccatgagaaacagcctgaccaaccacctgactttcttacattctgccgtaaaaaagtataaagaacatcacattcagccagaacaagggccaaaccacctcatcgtgggaacatgttatctacattttcccaggttacatgccccccaagatccctcccacccagggctataattgccccagcctgtaagcagcggtgagcact--ggcattaagcgggtcccccacctcagcaagtcttgtgctgaacatagaacctacattgctgtagagccgccaactccctctctttctttaaccctcgccttcccttg---aaaaaacctaaTGAAGAT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75350429 424 - 133195287 tgttagtccaaactgcaccattctgtaaacgcaccc----------------accatacccctgcatttcacagatcttggttaaagtaaaacattccatggggggttgggccatgagaaacagcctgaccaaccacctgagtttcttacattctgctgtaaaaaagtataaagaacatcacattcagccagaacaagggccaaaccacctcatcgtgggaacatgttatctacattttcccaggttacatgccccccaagatccctcccacccagggctataattgccccagcctgtaagcagcggtgagcact--ggcattaagcgggtcctccacctcagcaagtcttgtgctgaacgtagaacctgcattgctgtagagccgccaactccctctctttctttaaccctcgccttcccttg---aaaaaacctaaTGAAGAT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73214800 424 - 125196307 TGTTAGTCCAAACTGCACCATTCTGTAAATGCACCC----------------ACCATACCCCTGCATTTCACAGATCTTGGTTAAAGTAAAACATTCCATGGGGGGTTGGGCCATGAGAAACAGCCTGACCAACCACCTGACTTTCTTACATTCTGCCgtaaaaaagtataaagaacaTCACATTCAGCCAGAACAAGGGCCAAACCACCTCATCATGGGAACATGTTATCAACATTTTCCCAGGTAACATGCCCCCCAAGATCCCTCCCACCCAGGGCTATAATTGCCCCAGCCTGTAAGCAGCGGTGAGCACT--GGCATTAAGCGGGTCCCCCACCTCAGCAAGTCTTGTGCTGAACGTAGAACCTGCATTGCTGTAGAGCCGCCaactccctctctttctttaaCCCTCGCCTTCCCTTG---AAAAAACCTAATGAAGAT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72046851 424 - 125710982 tgttagtccaaactgcaccattctgtaaacacaccc----------------accatacccctgcatttcacagatattggttaaagtaaaacattccatggggggttgggccatgagaaacagcctgaccaaccacctgactttcttacattctgccgtaaaaaagtataaagaacatcacattcggccagaacaagggccaaatcacctcatcatgggaacatgttatcaacattttcccaggtaacatgccccccaagatccctcccacccagggctataattgccccagcctgtaagcagcagtgagcact--ggcattaagctggtcccccatctctgcaagtcttatgctgaacatagaacctgcattgctgtagagccgccaactccctctctatctttaaccctcgccttcccttg---ataaaacctaaTGAAGAT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75508205 424 - 121768101 tgttagttc-aactgcaccattttgtaaaccacccccgacaccaccatccccgccccccccccccatttcacagatcttgattaaagtaaaatgttccatgggggtttggaccatgagaaacagcctg--------cccgactttctgacattctgctgtaaaaaagtacagagaacatcacattcatctggaacatgggccaaaccagctcatcatgggaacatgtta---acgttttcccaggcaacag---cccccagacccctcccgccctgggctataattgccccagcctgtaagcagtggtgagcatgtaagcattaagcaggtcccccacctctgcaggtcttatgctgaacatagaacctgcattgctgtaaagccaccaactcc---tctttctttaaccctcatcttcccttt---taaaaacctaacaAGGAT i calJac3.chr12 C 0 C 0 e canFam3.chr4 27674364 0 + 88276631 C e mm10.chr14 24093499 39790 + 124902244 I a score=298180.000000 s hg38.chr10_KI270825v1_alt 14293 92 + 188315 GTCTCACAGCTAA-----ACCTTA-GAAACCATGACCTTCACTGAAACTGGCTGAGTTTAAGGAGAGGCTCTTAGTCATGGTCAGTTTCCCCTCTCCT s panTro4.chr10 76384931 92 + 133524379 GTCTCACAGCTAA-----ACCTTA-GAAACCATGACCTTCACTGAAACTGGCTGAGTTTAAGGAGAGGCTCTTAGTCATGGTCAGTTTCCCCTCTCCT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76052698 92 - 133410057 GTCTCACAGCTAA-----ACTTTA-GAAACCAAGACCTTCACTGAAACTGGCTGAGTTTAAGGAGAGGCTCTTAGTCATGGTCAGTTTTCCCTCTCCT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34995080 92 + 104879549 GTCTCACAGCTAA-----ACCTTA-GAAACCATGACCTTCACTGAAACTGGCTGAGTTTAAGGAGAGGCTCTTAGTCATGGTCAGTTTCCCCTCTCCT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73788678 93 - 130959383 GTCTCACAGCTAA-----ACCTTAGGAAACCATGACCTTCACTGAAACTGGCTGAGTTTAAGCAGAGGCTCTTAGTCATGGTCAGTCTCCCCTCTATT i rheMac3.chr9 C 0 I 33 s macFas5.chr9 75350853 93 - 133195287 GTCTCACAGCTAA-----ACCTTAGGAAACCATGACCTTCACTGAAACTGGCTGAGTTTAAGCAGAGGCTCTTAGTCATGGTCAGTCTCCCCTctatt i macFas5.chr9 C 0 I 31 s papAnu2.chr9 73215224 93 - 125196307 GTCTCACAGCTAA-----ACCTTAGGAAACCATGACCTTCACTGAAACTGGCTGAGTTTAAGCAGAGGCTCTTAGTCATGGTCAGTCTCccctctatt i papAnu2.chr9 C 0 I 31 s chlSab2.chr9 72047275 93 - 125710982 GTCTCACAGCTAA-----ACCTCAGGAAACCATGACCTGCACTGAAACTGGCTGAGTTTAAGCAGAGGCTCTTAGTCATGGTCAGTCTCCCCTCTATT i chlSab2.chr9 C 0 I 33 s calJac3.chr12 75508629 84 - 121768101 --------GCTAA-----ACCTTA-GAAACCATGACCTTCACTGAAACTGGCTGAGTTTAAGGAGAGACTCTTAGTCATGGTCAGTTTCCCCTCTCCT i calJac3.chr12 C 0 C 0 s canFam3.chr4 27674364 97 + 88276631 ATCCTCCAGCTAAGCATGACCTCA-GTGACCATGGTGGCCACCAGGCCCGGCTGAGTTTGAGGATGGGCTCCACATCTTGTGTGGGTCACCCTTTCCT i canFam3.chr4 C 0 C 0 e mm10.chr14 24093499 39790 + 124902244 I a score=4488.000000 s hg38.chr10_KI270825v1_alt 14385 4 + 188315 CTGG s panTro4.chr10 76385023 4 + 133524379 CTGG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76052790 4 - 133410057 CTGG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34995172 4 + 104879549 CTGG i nomLeu3.chr18 C 0 C 0 s macFas5.chr9 75350977 3 - 133195287 CTG- i macFas5.chr9 I 31 C 0 s papAnu2.chr9 73215348 3 - 125196307 CTG- i papAnu2.chr9 I 31 C 0 s calJac3.chr12 75508713 4 - 121768101 CTGG i calJac3.chr12 C 0 C 0 s canFam3.chr4 27674461 4 + 88276631 CTGG i canFam3.chr4 C 0 C 0 e mm10.chr14 24093499 39790 + 124902244 I e chlSab2.chr9 72047368 33 - 125710982 I e rheMac3.chr9 73788771 33 - 130959383 I a score=423807.000000 s hg38.chr10_KI270825v1_alt 14389 134 + 188315 CTCCCACCTCCCTTGGCCATGCTGTGTCCCTTGAGGGATGAGCACACCTGGCTGCTTCTCCAGACACTAGTCC-CCTCCGATTACCAGC-------------TCTGGGCT-GGGCTGACCACCTTCTCAACCATCCTGGTCAGCATCCT s panTro4.chr10 76385027 134 + 133524379 CTCCCACCTCCCTTGGCCGTGCTGTGTCCCTTGAGGGATGAGCACACCTGGCTGCTTCTCCAGACACTAGTCC-CCTCCGATTACCAGC-------------TCTGGGCT-GGGCTGACCACCTTCTCAACCATCCTGGTCAGCATCCT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76052794 129 - 133410057 CTCCCACCTCCCTTGGCCATGCTGTGTCCCTTGAGGGATGAGCACACCTGGCTACTTCCCT-----CAAGTCC-CCTCCGATTACCAGC-------------TCTGGGCT-GGGCTGACCACCTTCTCAACCATCCTGGTCAGCATCCT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34995176 134 + 104879549 CTCCCACCTCCCTTGGCCATGCTGTGTCCCTTGAGGGATGAGCACACCTGGCTGCTTCTCCAGACACTAGTCC-CCTCCCATTACCAGC-------------TCTGGGCT-GGGCTGACCACCTTCTCAACCATCCTGGTCAGCATCCT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73788804 134 - 130959383 GTTTCACCTCCCTTGGTCATGCTATGTCCCTTGGGGGATGAGCACACCTGGCTGCTTCTCCAGACACTAGTCC-CCTCCCATTACCAGC-------------TCTGGGGT-GGGCTGACCACCTTCTCAACCATCCTGGTCAGCATCCT i rheMac3.chr9 I 33 C 0 s macFas5.chr9 75350980 133 - 133195287 -TTTCACCTCCCTTGGTCATGCTATGTCCCTTGGGGGATGAGCACACCTGGCTGCTTCTCCAGACACTAGTCC-CCTCCCATTACCAGC-------------TCTGGGGT-GGGCTGACCACCTTCTCAACCATCCTGGTCAGCATCCT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73215351 133 - 125196307 -TTTCACCTCCCTTGGTCATGCTATGTCCCTTGGGGGATGAGCACACCTGGCTGCTTCTCCAGACACTAGTCC-CCTCCCATTACCAGC-------------TCTGGGGT-GGGCTGACCACCTTCTCAACCATCCTGGTCAGCATCCT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72047401 134 - 125710982 GTTTTACCTCCCTTGGCCATGCTATGTCCCTTGGGGGATGAGCACACCTGGCTGCTTCTCCAGACACTAGTCC-CCTCCCATTACCAGC-------------TCTGGGGT-GGGCTGACCACCTTCTCAACCATCCTGGTCAGCATCCT i chlSab2.chr9 I 33 C 0 s calJac3.chr12 75508717 123 - 121768101 CTCCCACCTCCCTTAACCATGCTGTGTCCCTTGGGGGATGAGCACACCTGGCTGCTTCTCCAGACACTAGTCC-CCTCCCATTTCCAGC-------------TCTGGGCT-GAGCTGGCCACCTTCCCAACTATTCTG----------- i calJac3.chr12 C 0 C 0 s canFam3.chr4 27674465 148 + 88276631 CTCCCATTCCCCTCAGCAAAGCTACGTGCCTGGTTGGATCCGCGCACCCACCATCTTCTGTGGCTACTGGTCCTCCTCCCAGGCCTGGCCCCGTCACCCAAGTCTGGGATGGGGATGGACTCCTTCTTGGTTG-CCTGGCAGGCATTCT i canFam3.chr4 C 0 I 2486 e mm10.chr14 24093499 39790 + 124902244 I a score=2648.000000 s hg38.chr10_KI270825v1_alt 14523 2 + 188315 AC s panTro4.chr10 76385161 2 + 133524379 AC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76052923 2 - 133410057 AG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34995310 2 + 104879549 AG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73788938 2 - 130959383 AG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75351113 2 - 133195287 AG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73215484 2 - 125196307 AG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72047535 2 - 125710982 AG i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27674613 2486 + 88276631 I e mm10.chr14 24093499 39790 + 124902244 I e calJac3.chr12 75508840 0 - 121768101 C a score=2137502.000000 s hg38.chr10_KI270825v1_alt 14525 669 + 188315 GTTCTATCTCTTACAGCAAACAACCAGCCTATTTCCTTCAATGCCTCCTTCACTGTTTCTTTGAGACTAGAGTAATATAATGCTTTTAACAGTGGAAA---GACTA-TAAAAAATGAAGTTATCAATACTCAATAAGTGA--GTACATTCTCCCAAATAaatactatgtgtgttgccataaaaaagaatgcagcagatccacatggtctgatacaggaa-aatttccatggcatt-----------------gggtagggaaaaaatctagtAGGTGGATTATAATTATG-TTTAGG-AAAAAATATGAAAGGGGAA--TACAAGACTA-TTTTTTGCTCGTATAGACATTAAACTGCAACAGTAGTTACT----------AAGTGGAATTTAAGATAGAGCACAATAGACTCCCCTCTAAACATGATTACAAAAAGTACAAACACAGACTAGTCTGTTTTTCTGTCATGAAAACCCATGTACTCACCACTTAGATCTAAG---ACTACATTTCGCCATACTGCATTATAA-AT---TTTTTTT---AATGAGCCATTTCAGAGGAAATTACTTCAGATGC-TGCATCTTTAAAGTGTTGA-GTTTACCTTGCCTCAACATATTCCCCTACAAGATGCCATTAACACCCTAACACAATAAGTGATTCCCCAATACCATATAAT--TGAGTCCATATGAAAATCTCAATTGTTTCCCAAATGT s panTro4.chr10 76385163 672 + 133524379 GTTCTATCTCTTACAGCAAACAACCAGCCTATTTCCTTCAATGCCTCCTTCACTGTTTCTTTGAGACTAGAGTAATATAATGCTTTTAACAGTGGAAA---GACTA-TAAAAAATGAAGTTATCAATACTCAATAAGTGA--GTACATTCTCCCAAATAaatactatgtgtgttgccataaaaaagaatgcagcagatccacatggtctgatacaggaa-aatttccatggcatt-----------------gggtagggaaaaaatctagtAGGTGGATTATAATTATG-TTTAGG-AAAAAATATGAAAGGGGAA--TACAAGACTA-TTTTTTGCTCCTATAGACATTAAACTGCAACAGTAGTTACT----------AAGTAGAATTTAAGATAGAGCACAATAGACTCCTCTCTAAACATGATTATAAAAAGTACACACACAGACTAGTCTGTTTTTCTGTCATGAAAACCCATGTACTCACCACTTAGATCTAAG---ACTACATTTCGCCATACTGCATTATAA-AT---TTTTTTTTTTACTGAGCcatttcagaggaaattacttcagatgc-tgcatctttaaagtgttga-gtttaccttgcctcaacatattcccctacaagatgccattaacaccctaacataataagtgattccccaataccatataat--tgagtccatatgaaaatctcaattgtttcccaaatgt i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76052925 668 - 133410057 GTTCTATCTCTTATGGCAAACAACCAGCCTATTTCCTTCAATGCCTCCTTCACTTTTTCTTTGAGACTAGAGTAATATAAtgcttttaacagtggaaa---gacta-caaaaaatgaagttatcaatacccaataagtga--gtacattctcccaaataaatactatgtgtgttgccataaaaaagaatgcagcagatccacatggtctgatacaggaa-aatttccatggcatt-----------------gggtagggaaaaaatctagtaggtggattataattatg-tttagg-aaaaaatatgaaaggggaa--tacaagacta-ttttttgctcgtATAGACATTAAACTGCAACAGTAGTTACT----------AAGTAGAATTTAAGATAGAGCACAGTAGACTCCTCTCTAAACATGATTATAAAAAGTACAAACATAGACTAGTCTGTTTTTCTGTCATGAAAACCCATGTACTCACCACTTAGATCTAAG---ACTACATTTCGCCATACTGCATTATAA-AT---TTTTTTT-TTACTGAGCCATTTCAGAGGAAATTACTTCAGATGC-TGCATCTTTAAAGTGTTGA-GTTTACATTGCCTCAACATATTCCCCTACAAGATGCCATTAACACCCTAACACAATGAGTGATTCCCCAATACCATATAAT--TGAGTCCATATGAAAATCTCAATTGTTTCCCAAA--- i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34995312 667 + 104879549 GTTCTATCTCTCATGGCAAGCAACCAGCCTATTTCCTTCAATGCCTCCTTCACTGTTTCTTTGAGACTAGAGTAATATAATGCTTTTAACAGTGGAAA---GACT---AAAAAATGAAGTTATCAATACTCAATAAGTGA--GTACATTCTCCCAAATAaatactatgtgtgttgccataaaaaagaatgcagcagatccacatggtctgatataggaa-aattttcatggcatt-----------------gggtagggaaaaaatctagtAGGTGGATTATAATTATG-TTTAGG-AAAAAATATGAAAGGGGAA--TACAAGACTA-TTTTTTACTCGTATAGACATTAAACTGCAACAGTAGTTACT----------AAGTAGAATTTAAGATACAGCACAATAGACTCCTCTCTAAACATGACTATAAAAAGTACAAACATAGACTAGTCTGTTTTTCTGTCATGAAAACCCATGTACTCACCACTTAGATCTAAA---ACTACATTTCGCCATACTGCATTATAA-AT---TTTTTTT---ACTGAGCCATTTCAGAGGAAATTACTTCAGATGC-TGCATCTTTAAAGTGTTGA-GTTTACATTGCCTCAACATATTCCCCTACAAGATGCCATTAACACCCTAACACAATAAGTGATTCCCCAATACCATACAAT--TGAGTCCACAGGAAAATCTCAATTGTTTTCCAAATGT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73788940 669 - 130959383 GTTCTATCTCTTACAGCAAGCAACCAGCCTATTTCCTTGAATGCCTCCTTCACTGTTTCTTTGAGGCTAGAGTAATATAATGCTTTTAACAGTAGAAA---GACTA-TAAAAAATGAAGTTATCAATACTCAATAAGTGA--GTACATTCTCCCAAATAAATATTATATGTGTTGCCATAAAAAAGAATATGGCAGATCCACACAGTCTGATATAGGAA-AATTTCCATGGCATT-----------------GGGTGGGGAAAAAATCTAGTAGGTGGATTATAATTATG-TTTAGG-AAAAAATATGAAAGGGGAA--TACGAGACTA-TTTTTTGCTCATACAGACATTAAACTGCAACAGTAGTTAAT----------AAGTAGAATTTAAAATAGAGCACAAAAGTCTCCTCTCTAAACATGATTATAAAAAGTACAAACATAGACTAGTCTGTTTTTCTGTCATGAAAACCCATGTTCTCACCACTTACATCTAAA---ACTACATTTTGCCATACTGCATTATAA-TT---TTTTTTT---ACTGAACCATTTCAGAGGAAATTACTTCAGATGT-TGCATCTTTAAACTGTTGA-GTTTGCATTGCCTCAACATATTCCCCTACAAGATGCCATTAACACCCTAACACAGTAAGTGATTCCCCAATACTATATAAT--TGAGTACATATAAAAATCTCAATTGTTTCCCAAATGT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75351115 670 - 133195287 GTTCTATCTCTTACAGCAAGCAACCAGCCTACTTCCTTGAATGCCTCCTTCACTGTTTCTTTGAGGCTAGAGTAATATAATGCTTTTAACAGTAGAAA---GACTA-TAAAAAATGAAGTTATCAATACTCAATAAGTGA--GTACATTCTCCCAAATAAATATTATATGTGTTGCCATAAAAAAGAATGTGGCAGATCCACACAGTCTGATATAGGAA-AATTTCCATGGCATT-----------------GGGTGGGGAAAAAATCTAGTAGGTGGATTATAATTATG-TTTAGG-AAAAAATATGAAAGGGGAA--TACGAGACTA-TTTTTTGCTCATACAGACATTAAACTGCAACAGTAGTTAAT----------AAGTAGAATTTAAAATAGAGCACAAAAGTCTCCTCTCTAAACATGATTATAAAAAGTACAAACATAGACTAGTCTGTTTTTCTGTCATGAAAACCCATGTACTCACCACTTACATCTAAA---ACTACATTTTGCCATACTGCATTATAATTT---TTTTTTT---ACTGAACCATTTCAGAGGAAATTACTTCAGATGT-TGCATCTTTAAACTGTTGA-GTTTGCATTGCCTCAACATATTCCCCTACAAGATGCCATTAACACCCTAACACAGTAAGTGATTCCCCAATACTATATAAT--TGAGTGCATATAAAAATCTCAATTGTTTCCCAAATGT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73215486 669 - 125196307 GTTCTATCTCTTACAGCAAGCAACCAGCCTATTTCCTTGAATGCTTCCTTCACTGTTTCTTTGAGGCTAGAGTAATATAATGCTTTTAACGGTAGAAA---GACTA-TAAAAAATGAAGTTATCAATACTCAATAAGTGA--GTACATTCTcccaaataaatattatatgtgttgccataaaaaagaatgtggcaGATCCACACAGTCTGATATAGGAA-AATTTCCATGGCATT-----------------GGGTAGGGAAAAAATCTAGTAGGTGGATTATAATTATg-tttagg-aaaaaatatgaaagggGAA--TACGAGACTA-TTTTTTGCTCATACAGACATTAAACTGCAACAGTAGTTAAT----------aagtagaatttaaaatagaGCACAAAAGTCTCCTCTCTAAACATGATTATAAAAAGTACAAACATAGACTAGTCTGTTTTTCTGTCATGAAAACCCATGCACTCACCACTTACATCTAAA---ACTACATTTTGCCATActgcattataa-tt---ttttttt---actgaacCATTTCAGAGGAAATTACTTCAGATGC-TGCATCTTTAAACTGTTGA-GTTTGCATTGCCTTAACATATTCCCCTACAAGATGCCATTAACACCCTAACACAGTAAGTGATTCCCCAATACTATATAAT--TGAGTCCATATAAAAATCTCAATTGTTTCCCAAATGT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72047537 669 - 125710982 GTTCTATCTCTTACAGCAAGCAACCAGCCTATTTCCTTGAATGCCTCCTTCACTGTTTCTTTGAGTCTAGAGTAATATAATGCTTTTAACAGTAGAAA---GACTA-TAAAAAATGAAGTTATCAATACTCAATAAGTGA--GTACATTCTCCCAAATAaatactatgtgtgttgccataaaaaagaatgtggcagatccacacagtctgatataggaa-aatttccatggcatt-----------------gggtagggaaaaaatctagtAGGTGGATTATAATTATG-TTTAGG-AAAAAATATGAAAGGGGAA--TACAAGACTA-TTTTTTGCTCATACAGACATTAAACTGCAACAGTAGTTAAT----------AAGTAGAATTTAAGATAGAGCACAAAAGACTCCTCTCTAAACATGATTATAAAAAGCACAAACATAGACTAGTCTGTTTTTCTGTCATGAAAACCCATGTACTCACCACTTACATCTAAA---ACTACATTTCGCCATACTGCATTATAA-AT---TTTTTTT---ACTGAACCATTTCAGAAGAAATTACTTCAGATGC-TGCATCTTTAAACTGTTGA-GTTTGCACTACCTCAACATATTCCCCTACAAGATGCCATTAACACCGTAACACAGTAAGTGATTCCCCAATACTATATAAT--TGAGTCCATATAAAAATCTCAGTTGTTTCCCAAATGT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75508840 620 - 121768101 ---------------------------------------AATGCCTCTTTCACTGTTTCTTTAAGAATAGAATAATATAATGCATTTAACAGTGGAAA---GACTATTAAAAAATGAAGTTATCCATACTCAGAAAGTGA--CTACATTTTCCCAAATA------TTGTGTGTTGCCATAAAAAACAGTGAGG--------CATGATCTGCTATAGAAA-AATCTCCATGGCATT-----------------GGGTAGGGAAAAAATCTAGTAGGTGGATTATAATTATA-TTTAGGAAAAAAATATAAAAGGGGGA--CACAAAACTATTTTTTTGCTCGTATTGACATTAAACTGCA--AGTCATTACC----------AAGTAGAATTTAAGATAGAGCACAATAGACTCCTCTCTGAACGTGATTATAAAAAGGACAAACATAGACTAGTCTGTTTTCCTGTCATGAAAACCCATGTACTCACCTCTTAGATCTAAA---ACTACATTTGACCATATTGCATCATCT-ATACGTTTTTTT---ACTGAACCATTTCAGAGGAAATTACCTTAGATGC-TGCATCTTTAAAATGTTGA-GTTTGCATTGCCTCCACATATTCCCCTACGCAATGCCATTAGCACCCTAACACAATAAGTGATTCCCCAATACCATATAAT--TGAGTCCATATGAAAATCTCAGTTGTTTCCCAAATGT i calJac3.chr12 C 0 C 0 s canFam3.chr4 27677099 678 + 88276631 GCTATGTGTCTTCGGGTAAGCAACAAACCTGTTTCCTTTCATGCCTCCTGCACTCTTTCTTTGAGAGTAGAATTAGATAATGCTTTTAACAGCAGAAaaatgactt-ttaaaaggg--------tatatttaataagtgatgattcattcatcc-aataaatattctcactgcagtcat-aaaaagaatgaggcaggttcacatgttttgatatggaaagaatccccacggtatTGGTGTATGTGTGTGGGGGGGTGAGGGGGGAATCAAGCAGCTAGGTTATGATTTTATTTTAGG-TAAAAACGTTAAGAAAGAATTTACAAGTCTG-TTGCTTGCTTGTATAGACA-CAAACTGTAACAGTGGTTATTTAGAGGAAGCAAGGGGAACCGAGGGTCAATCAAAATACCCT-TTTTCTAAGCATTAGTGTTAAGAAGTC---CACAGAGAAGTCTGCTTTTCTGTGATGAAAACCCACG-GTTCACCACCCAGGTCTAGACCGACAACATTTTGTCCTGCTGCATCAC---CT---TGATCTT---GCTAACCCATTTCGAAGGAAATTACACGAGACACTTGTATTCCTGAAGAGTTGAGGTTGGCAATGCCACGACATATTCCCC-------------TTGCACCCTAACATCCAGACCCATTCCCTGGTACAATTGCATTCTGAATCCATATTCAGATCTCTATTGTT---CAAGTGT i canFam3.chr4 I 2486 I 14 e mm10.chr14 24093499 39790 + 124902244 I a score=1316041.000000 s hg38.chr10_KI270825v1_alt 15194 449 + 188315 tgttgctgatcaccaggggcttggtctaggtcctgttgctcaccacacagaaagccaatcactgtggcaacaagtattgccagggaagaagattttatttgagtgatgtcagccagagagaagggagaccagcctcaaatacgtcccttcccaccaactaaagtta------------------agggaaaagaaga-ggggcagggacgaggagttggtcaat-aggcagcaggcggtagtataaggggttccagcatctcattgtaaccacatgtgggaaaacaggaatgaggcagggataagaagttggtcaacaaggagcaggtgcacctcactgtccagtggcagtgatctggaaagtctcagttcccggtatcattcaggaggccc----gatggttggtttcccaagaaaggaactcagataagacaaatgtaagttttccaagcttcaaggtttttgtt--------tttttt s panTro4.chr10 76385835 449 + 133524379 tgttgctgatcaccaggggcttggtctaggtcctgttgctcaccacacagaaagccaatcactgtggcaacaagtattgccagggaagaagattttatttgagtgatgtcagccggagagaagggagaccagcctcaaatatgtcccttcccaccaactaaagtta------------------agggaaaagaaga-ggggcaggaatgaggagttggtcaat-aggcagcaggcggtagtataaggggttccagcatctcattgtaaccacatgtgggaaaacaggaatgaggcagggataagaagttggtcaaaaaggagcaggtgcacctcactgtccagtggcagtgatctggaaagtctcagttcccggtatcattcaggaggccc----gatggtttgtttcccaagaaaggaactcagataagacaaatgtaagttttccaagcttcagggtttttgtt--------tttttt i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76053593 454 - 133410057 tgttgctgatcaccaggggcttggtctaggtcctgttgctcaccacacagaaagccaatcactgtggcaacaagtattgccagggaagaagattttatttgagtgatgtcagccggagagaagggagaccagcctcaaatatgtcccttcccaccaactaaggtta------------------agggaaaagaagagggggcagggacgaggagttggtcaat-aggcagcaggcggtagtataagggggtccagcatctcattgtaaccacatgtgggaaaacaggaatgaggcagggataagaagttggtcaacaaggagcaggtgcacctcattgtccagtggcagtgatctggaaagtctcagttcccagtatcattcaggaggccc----gatggttggtttcccgagaaaggaactcagataagacaaatgtaagttttccaagcttcaaggtttttgtt----tttgtttttt i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34995979 468 + 104879549 tgttgctgatcaccaggggcttggtctaggtcctgttgctcaccacacagaaagccaatcactg-gacaacaagtattgccagggaagaagaatttatttgagtgatgtcagcc--agagaagggagaccagcctcaaatatgtcccttcccaccaactaaagttaagggtttatatagtggggagggaaaacaaga-ggggcagggatgagaagttggtcaat-aggcagcaggcagtagtataagggggtccagcatctcattgtaaccacatgtgggaaaacaggaatgaggcagggataagaagttggtcaacaaggagcaggtgcacctcattgtccagtggcagtgatctggaaagtctcagttcctggtatcattcaggaggccc----aatggttggtttcccgagaaaggaactcagataagagaaatgtaagttttccaagcttcaagatttttgtt----tttgtttttt i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73789609 472 - 130959383 tgttgctgatcaccaggggcttgatccaggtcctgttgctcaccacatagaaagccaatcactgtggcaacaagtattgccagggaagaagattttatttgagtgatgtcagctgaagaaaagggagaccagcctcaaatatgtcccttcccaccaactaaaattaagggtttatatagtggggagggaaaacaaga-ggggcagggacgaggagttggtcaataaggcagcaggcggtagtataaggaggtccagcatctcattgtaaccacaggtgggaaaacaggaatgaggcagggataagaagttggtcaagaagcagcaggtgcccctcattgtccagtggcagtgatctggaaaa--tcagttcctggtatcattcaggaggcct----gatggttggtttcccaagaaaggaactgagataagacaaatgtaagttttccaagcttcgaggtttttgtttg--tttttttttt i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75351785 473 - 133195287 tgttgctgatcaccaggggcttggtccaggtcctgttgctcaccacatagaaagccaatcactgtggcaacaagtattgccagggaagaagattttatttgagtgatgtcagctgaagaaaagggagaccagcctcaaatatgtcccttcccaccaactaaaattaagggtttatatagtggggagggaaaacaaga-ggggcagggacgaggagttggtcaataaggcagcaggcggtagtataaggaggtccagcatctcattgtaaccacaggtgggaaaacaggaatgaggcagggataagaagttggtcaagaagcagcaggtgcccctcattgtccagtggcagtgatctggaaaa--tcagttcctggtatcattcaggaggcct----gatggttggtttcccaagaaaggaactgagataagacaaatgtaagttttccaagcttcaaggtttttgtttgt-tttttttttt i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73216155 473 - 125196307 TGTTGCTGATCACCAGGGGCTTGGTCTAGGTCCTGTTGCTCACCAcatagaaagccaatcactgTGGCAacaagtattgccagggaagaagatTTTATTTGAGTGATGTCAGCTGAAGAAAAGGGAGACCAGCCTCAAATATGTCCCTTCCCACCAACTAAAATTAAGGGTTTATATAGTGGGGAGGGAAAACAAGA-GGGGCAGGGACGAGGAGTTGGTCAATAAGGCAGCAGGCGGTAGTATAAGGGGGTCCAGCATCTCATTGTAACCACATGTGAGAAAACAGGAATGAGGCAGGGATAAGAAGTTGGTCAAGAAGCAGCAGGTGCCCCTCATTGTCCAGTGGCAGTGGTCTGGAAAA--TCAGTTCCTGGTATCATTCAGCAggcct----gatggttggtttcccaagaaaggaactcagataagacaaatgtaagtcTTCCAAGcttcaaggtttttgttttt-tttttttttt i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72048206 473 - 125710982 tgttgctgatcaccaggggcttggtctaggtcctgttgctcaccacacagaaagccaatcactgtggcaacaagtattgccagggaagatgattttatttgagtgatgtcagctgaagaaaagggagaccagcctcaaatatgtcccttcccaccaactaaagttaagggtttatatagtgggaagggaaaacaaga-ggggcagggacgaggagtgggtcaataaggcagcaggtggtagtataagggggtccagcatctcattgtaaccacatgtaggaaaacaggaatgaggcagggataagaagttggtcaagaagcagcaggtgcacctcattgtccagtggcagtgatctggaaaa--tcagttcctggtatcattctggaggcct----gatggttggtttcccaagaaaggaactcagataagacaaat-taaattttccaagcttcaaggtttttgtttccgtttttttttt i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75509460 445 - 121768101 TGATGCTGCTcaccacaggcttggtctaggtcctgctgcttgccacatagcaagtcaatcactgtgacatcaagtattgccaaggaagaagattttatttgggtggt--------------------atcagcctcaaatatgtcccttcccagcaac-----tcaaggatttacatactggaaagcaaaaacagga-ggggccgggacaaggagttggtcaat-aggcagcaggcagtagcataaggggttccagcatctcatcgtaaccacatgtgggaaaacaggaatgaggcaggagtaagaagttggtcaacaagcagcaggtgcacctcattgtccagtggcagtaatctggaaagcctcagttcccagtaccacttaggaggcctgatggatggttggtttcctgagaaaggaactcagataagacaaatgtaagtttttcaagcttcaggG-Gtttgtt----gttgtt---- i calJac3.chr12 C 0 C 0 e canFam3.chr4 27677777 14 + 88276631 I e mm10.chr14 24093499 39790 + 124902244 I a score=255259.000000 s hg38.chr10_KI270825v1_alt 15643 115 + 188315 aaaatatggaatccttcactaatttgagtgtcatccttacaggggccatgctaatc--------ttctctgtatcgttccaattttagaatatgtgctgctgaagtgagcactttgttttttc----------- s panTro4.chr10 76386284 115 + 133524379 taaatatggaacccttcactaatttgagtgtcatccttacaggggccatgctaatc--------ttctctgtatcgttccaattttagaatatgtgctgctgaagtgagcactttgttttttc----------- i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76054047 115 - 133410057 taaatatggaacccttcaccaatttgagtgtcatccttacaggggccatgctaatc--------ttctctgtatcgctccaattttagaatatgtgctgccgaagtgagcacTTCGttttttc----------- i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34996447 114 + 104879549 taaatacggaacccttcaccaatttgagtgtcatccttacaggggccatgctaatc--------ttctctgtatcgttccaattttagaatatgtgctgccgaagtgagcacttt-ttttttt----------- i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73790081 126 - 130959383 ttaatatggaacccttcaccaatttgcatgtcatccttacaggggccatgctaatc--------ttctctgtatcgttccaattttagtatatgtgctgctgaagtgagcacttttctttttttttttttttta i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75352258 126 - 133195287 ttaatatggaacccttcaccaatttgcatgtcatccttacaggggccatgctaatc--------ttctctgtatcgttccaattttagtatatgtgctgctgaagtgagcacttttcttttttttttttttttt i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73216628 131 - 125196307 ttaatatggaaccCTTCAccaatttgcatgtcatccttacaggggccatgctaatcttctctgtttctctgtatcgttccaattttagtatatgtgctgctgaagtgagcacttttctttttttttttttt--- i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72048679 126 - 125710982 aaaatatggaacgcttcatcaatttgcatgtcatcctcacaggggccatgctaatc--------ttctctgtatcattccaattttagtatatgtgctgctgaagcgagcacttttctttttcttttttttttt i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27677777 14 + 88276631 I e mm10.chr14 24093499 39790 + 124902244 I e calJac3.chr12 75509905 0 - 121768101 C a score=921220.000000 s hg38.chr10_KI270825v1_alt 15758 323 + 188315 a-------------------agacaacagtttcattctttcacccaggctggagtgaagtggcaccatcttggctcactgcaacctccacctcccagattcaagtgattctcctgcctcagcctcccaagtagctgggattacaggtgtatgccaccacgcctggctaatttttgtattttcagtagaggcggggttttgccatgtgggccaggctggtctcgaactcctgacctcaggtgatccacccaccttggcctcctaaagtgctagaattacaggcttgagccaccgcgcccggcccaagcttcagttttatgagaaaactgggcctgtttcaATG s panTro4.chr10 76386399 322 + 133524379 a-------------------agacaacagtttcattctttcacccaggctggagtgaagtggcaccatcttagctcactgcaacctccacctcccaggttcaagtgattctcctgcctcagcctcccaagtagctgggattacaggtgtatgccaccacgcctggctaatttttgtattt-cagtagaggcggggttttgccatgtgggccaggctggtctcgaactcctgacctcaggtgatccacccaccttggcctcctaaagtgctagaattacaggcatgagccaccacacccggcccaagcttcagttttatgagaaaactggacctgtttcaATG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76054162 323 - 133410057 g-------------------agacatgagtttcattctttcacccaggctggagtgaagtggcaccatcttggctcactgcaacctccacctcccaggttcaagtgattctcctgcctcagcctcccaagtagctgggattacaggtgtatgccaccatgcccagctaatttttgtattttcagtagagacggggtttcgccatgtgggccaggctggtctcgaactcctgacctcaggtgatccacccaccttggcctcctaaagtgctagaattacaggcatgagccactgcgcccggcccaagcttcagttttatgagaaaactggggctgtttcaATG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34996561 323 + 104879549 a-------------------agacaagagtttcactctttcacctaggctggagtgaagtggcaccatcttggctcactgcaacctccacctcctaggttcaagtgattctcctgcctcagcctcccaagtagctgggattacaggtgtatgccaccatgcccagttaatttttgtattttcagtagagacggggtttcgccatgtgggccaggctggtctcgaactcctgacctcaggtgatccacccaccttggcctcctaaagtgctacaattacaggcatgagccaccgtgcctggcccaagcttcagttgtatgagaaaattgggccagtttcaATG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73790207 321 - 130959383 t-------------------aa--aagagtttcactctttaacccaggctgaggagaagtggcgccatcttggctcaccgcacacttcacctcccaggttcaagtgattctcctgcctcagccttccaagcagccgggattacaggcatatgccaccacgccagggtaatttttgtatttttagtagagatggggttttgccatgtgggccaggctggtctcgaactcctgacctcaggtgatccacccaccttggcctcctaaagtgctagaattacaggtgtgagccactgctcccagcccaagcttcagttttatgagaaaattcggccagtttcaATG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75352384 323 - 133195287 t-------------------agacaagagtttcactctttaacccaggctgaggtgaagtggcgccatcttggctcactgcacacttcacctcccaggttcaagtgattctcctgcctcagccttccaagcagccgggattacaggcatatgccaccacgccagggtaatttttgtatttttagtagagatggggttttgccatgtgggccaggctggtctcgaactcctgacctcaggtgatccacccaccttggcctcctaaagtgctagaattacaggtgtgagccactgctcccagcccaagcttcagttttatgagaaaattcggccagtttcaATG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73216759 323 - 125196307 t-------------------agacaagagtttcactctttaaCCCAGGCTGAGGtgaagtggcgccatcttggctcactgcacacttcacctcccaggttcaagtgattctcctgtctcagccttccaagcagctgggattacaggcatatgccaccacacctggctaatttttgtatttttagtagagatggggttttgccatgtgggccaggctggtctcgaactcctgacctcagatgatccacccaccttggcctcctaaagtgctagaattacaggcgtgagccactgctcccagcccaagCTTCAGTTTTATGAGAAAATTCAGCCAgtttcaatg i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72048805 342 - 125710982 tttttttttttttttttttgagacaagagtttcactctttaacccaagctggagtgaagtggcgccatcttggctcactgcacacttcaccttccgggttcaagtgattctcctgcctcagcctcccaagcagctgggattacaggcgtatggcaccacgcctggctaatttttgtatttttagtagagatggggttttgccatgtgggccaggctggtctcgaactcctgacctcaggtgatccacccaccttggcctcctaaagtgctagaattacaggcgtgagccactgctcccagcccaagcttcagttttatgagaaaattgggccagtttcaATG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75509905 315 - 121768101 -------------------gagacaacagtttcactctttcacccaggctggagtgacgtggcactatcttggctcactgcaacctccacctcccaagttcaagcaattcccctgctttagcctcccgagtaggtgggattataggcacccaccaccaagcctggctaatttttgtaattttagtagagacggggtttcaccattttggccaggctgctcttgaactcctgacc--------tccacttgcctcagccttccaaagtgctaggattacagatgtcagccaccgcacccagccCAAGCTTCAGTATTATGAGAAAACTGGGCCAGTTTCAATG i calJac3.chr12 C 0 C 0 e canFam3.chr4 27677777 14 + 88276631 I e mm10.chr14 24093499 39790 + 124902244 I a score=5362907.000000 s hg38.chr10_KI270825v1_alt 16081 1697 + 188315 TTTattttatttggttattcaagtctc--aacattctttcaatctaaaacagtcctcccaccagccctccttccccagccc---tttttaaatccatagcattgaagagaccaggtcattgtcttatagaatatccttcattttagatttgcctgattgtgtcttcattccctaaacttcctataaaccagcagttggatttaaagccttgataagacccaggtggaggatttttggcaagaacacattccagttgacactgtgtacttacttacttcatgttgtaactc------atatctggtggtttcattATGGGATCTACTAgaatatacagaccatgggcagatcatatacaaaaacagaactctgacccacagtctgcagtaaccagtccaggaagccaaacaacccctgtagcctttggtcccaaatggcccggacttg----atcagtacctgccagcttccctaattcttgcctctgttttgaaaatcctttagtaggaccaaccagagaaggccaaatatgcttccctaaccaatcacataggataccctgcttctagttagctcacccacagcctccagatgccaacagcctttgatcaaggctcacctgaagcctccccttttcccagcataaagctttctcactccgctgactgcctttgagtgtctg-caatggcaagtgactgtggctgactctctgtgtatataccacactgagaataagtagctgctgctcattttcatttgggtgg------------tctataattattACTGAAGTGAAGTGTGATCACAGTTAAGGTGGTAATAGTCAGACCCTTTACACTGTC------G------ATGGAC-TCAGACTTTTTACTTCATGCCTTGCTTATACTGCTTGGATGTTTT----CCATGT------------------------------------------------------GCCTATATTAATATTTACAATAAAAGCATGATTTAGATTTTCATTTAGAAT---TTATCTTAAAT--------GCA-------TCAAATATGCAATTTTAAGTCAAGTTTTGCATGTTTGGCTCAAAATATCAAAATAATGTTGTGTGGTTTTAAAATAACAAGGTTTATTGCTCTTTATATTAGACATGTAGTTAATTACGTTGATCTCCATAAAAATAAGTTTAATTTTAATTTGAATAAAAGAATGCCACAATGAAAT---------------ACTGACCATTAAAAAAAAAA-AAAA-GAATAAAGGACCTTAACCCTGGGCAAACATATAAAAGCATAGGAAAGTCACCCAGTATAATGTCTGGCACATTGCAGGTGTTTTGCA---ATTAGAGCCCATTCCCACGGTGGTGCACACTGCACAAGACCACAGAGGTCCAGCCCTTTTATCTTTCTGGTCCCATCCAGTCATCACCCATAGTGAATCCCGAAGGCAGCATCTCCACC-------CACCGTACT------GGAGGACCACCGACAACTCCTAGTCCTCAGGGGAAA-CTCCCTTCCATATTCTT--CTTGGTGGCGGCCAATATACATTTCTTTCTTCACTTCCCAGGACGTTTGA--CATACTTGGTGTTCCTCCCTCCAAGCTCCTCCCTTCCCTTCAGGTCTCAAGGTCTCATCCAACACTTCAAGCTCAAAATATCACACAAGCATCAAGGGGGTGAGCCCAGACAGGCACTCTTCCTTGTCCAGTTTCGGGAGAAGATCTCTGTTCCCTGTGACCCCAGGATACACAATGGCTGTTCTACACTCAGGAATCACTACATGTGATTCCCAGGACAGG-GGCTGCAACTCTTC s panTro4.chr10 76386721 1698 + 133524379 TTTattttatttggttattcaagtctc--aacattctttcaatctaaaacagtcctcccaccagccctccttccccagccc---tttttaaatccatagcattgaagagaccaggtcattgtcttatagaatatccttcattttagatttgcctgattgtgtcttcattccctaaacttcctataaaccagcagttggattgaaagccttgataagacccaggtggaggatttttggcaagaacacattccagttgacactgtgtacttacttacttcatGTTGTAACTC------ATATCTGGTGGTTTCATTATGGGATCTACTAgaatatacagaccatgggcagatcatatacaaaaacagaactctgacccacagtctgcagtaaccagtccaggaagccaaacaacccctgtagcctttggtcccaaatggccaggacttg----atcaatacctgccagcttccctaattcttgcctctgttttgaaaatcctttggtaggaccaaccagagaaggccaaatatgcttccctaaccaatcacataggataccctgcttctagttagctcacccacagcctccagatgccaacagcctttgatcaaggctcacctgaagcctccccttttcccagcataaagctttctcactccgctgactgcctttgagtgtctg-caatggcaagtgactgtggctgactctctgggtatataccacgctgagaataagtagctgctgctcattctcatttgggtgg------------tctataattattACTGAAGTGAAGTGTGATCACAGTTAAGGTGGTAATAGTCAGACCCTTTACACTGTC------G------ATGGGC-TCAGACTTTTTACTTCATGCCTTGCTTATACTGCTTGGATGTTTT----CCATGT------------------------------------------------------GTCTATATTAATATTTACAATAAAAGCATGATTTAGATTTTCATTTAGAAT---TTATCTTAAAT--------GCA-------TCAAATATGCAATTTTAAGTCAAGTTTTGCATGTTTGGCTCAAAATATCAAAATAATGTTGTGTGGTTTTAAAATAACAAGGTTTATTGCTCTTTATATTAGACATGTAGTGAATTACGTTGATCTCCATAAAAATAAGTTTAATTTTAATTTGAATAAAAGAATGCCACAATGAAAT---------------ACTGACCATTAAAAAAAAAA-AAAAAGAATAAAGGACCTTAACCCTGGGCAAACATATAAAAGCATAGGAAAGTCACCCAGTATAATGTCTGGCACATTGCAGGTGTTTTGCA---ATTAGAGCCCATTCCCACGGTGGTGCACACTGCACAAGACCACAGAGGTCCAGACCTTTTATCTTTCTGGTCCCATCCAGTCATCACCCATAGTGAATCCCGAAGGCAGCATCTCCACC-------CACAGTACT------GGAGGACCACCGACAACTCCTAGTCCTCAGGGGAAA-CTCCCTTCCATATTCTT--CTTGGTGGCGGCCAATATACATTTCTTTCTTCACTTCCCAGGACGTTTGA--CATACTTGGTGTTCCTCCCTCCAAGCTCCTCCCTTCCCTTCAGGTCTCAAGGTCTCATCCAACACTTCAAGCTCAAAATATCACATAAGCATCAAGGGGGTGAGCCCAGACAGGCACTCTTCCTTGTCCAGTTTCGGGAGAAGATCTCTGTTCCCTGTGACCCCAGGATACACAATGGCTGTTCTACACTCAGGAATCACTACATGTGATTCCCAGGACAGG-GGCTGCAACTCTTC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76054485 1700 - 133410057 TTTATTTTatttggttattcaagtctc--aacattctttcaatctaaaacagtcctcccaccagccctccttccccagcgc---tttttaaatccatagcattgaagagaccaggtcattgtcttacagaatatccttcattttagatttgcctgattgcgtcttcattccctaaacttcctataaaccagcagttggatttaaagccttgataagacccaagtggaggatttttggcaagaACACATTCCAGTTGACACTGTGTACTTACTTACTTCATGTTGTAACTC------ATATCTGGTGGTTTCATTATGGGATCTACTAgaatatatggacaatgggcagatcatatacaaaaacagaactctgacccacagtctgcagtaaccagtccaggaagccaaacatcccctgtagcctttggtcccaaatggccaggacttg----atcaatacctgccagcttccctaattcttgcctctgctttgaaaatcctttagtaggaccaactagagaaggccaaatatgcttccctaaccaatcacataggataccctgcttctagttagctcacccacagtctccagatgccaacagcctttgatcagggctcacctgaagcctccccttttcccagcataaagctttctcactcccctgactgcctttgagtgtgtg-caatggcaagtgactgtggctgactctctgggtatataccaagctgagaacaagtagctgctgctcattctcatttgggtgg------------tctataattattACAGAAGTGAAGTGTGATCACAGTTAAGGTGGTAATAGTCAGATCCTTTACACTGTC------G------ATGGAC-TCAGACTTTTTACTTCATGCCTTGCTTATACTGCTTGGATGTTTT----CCGTGT------------------------------------------------------GCCTATATTAATATTTACAATAAAAGCATGATTTAGATTTTCATTTAGAAT---TTATCTTAAAT--------GCA-------TCAAATATGCAATTTTAAGTCAAGTTTTGCATGTTTGGCTCAAAATATCAAAATAATGTTCTGTGGTTTTAAAATAACAAGGTTTGTTGCTCTTTATATTAGACATGTAGTTAATTACATTGATCTCCataaaaataagtttaattttaatttgaataaaataatGCCACAATGAAAT---------------ACTGACCATTTAAAAAAAAA-AAA--GAATAAAGGACCTTAACCCTGGGCAAACATATAAAAGCACAGGAAAGTcacccagtataatgtctggcacattgtaggtgttttgcaaatattAGAGCCCATTCCCATGGTGGTGCACACTGCACAAGACCACAGAGGTCCAGCCCTTATATCTTTCTGGTCCCATCCAGTCATCACCCATAGTGAATCCCGAAGGCAGCATCTCCACC-------TACAGTACT------AGAGGACCACCGACGACTCCTAGTCCTCAGGGGAAACCTCCCTTCCATCTTCTT--CTTGGTGGCGGCCAATATACATTTCTTTCTTCACTTCCCAGGACATTTGA--CGTACTTGGTGTCTCTCCCTCCAAGCTCCTCCCTTCCCTTCAGGTCTCAAGGTCTCATCCAACACTTCAAGCTCAAAACATTACATAAGCATCAAGGGGGTGAGCCCAGACAGGCACTCTTCCTTGTCCAATTTCAGGAGAAGATCTCTATTCCCTGTGACCCCAGGATACACAATGGCTGTTCTACACTCAGGAATCACTACATGTGATTCCCAGGACAGG-GGCTGCAACTCTTC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34996884 1679 + 104879549 -----TTTATTTGGTTATTCAAGtctc--aacattcttttaatctaaaacagtcctcccaccagccctccttccccagctc---tttttaaatccatagcattgaagagaccaggtcattgtcttatagaatatccttcattttagatttgcctgattgtgtcttcattccctaaacttcctgtaaaccagcagttgaattgaaagccttgataagacccaggtgga-gatttttggcaagaacacattccagttgacactgtgtacttacttacttcatGCTGTAACTC------ATATCTGGTGGTTTCATTATGGGATCTACTAGAATACACAGA-------cagatcatatacaaaaacagaactctgacccacagtctgcagtaaccagtccaggaagccaaacaacccctgtagcctttggtcccaaatggccaggacttg----atcaatacctgccagcttccctaattctcacctctgctttgaaaatcctttagtaggactaaccagagaaggccaaatatgcttccctaaccaatcacataggataccctgcttctagttagctcacccacagcctccagatgccaacagcctttgatcagggctcacctgaagcctccccttttcccaccataaagctttctcactc--ccgactgcctttgagtgtctg-caatggcaagtgaccatggctgactctctgggtatataccaagctgagaataagtagctgttgctcattctcatttgggtgg------------tctataattattACAGAAGTGAAGTGTGATCACAGTTAAGGTAGTAATAGCCAGACCCTTTACACTGTC------A------ATGGAC-TCAGACCTTTTACTTCATGCATTGCTTATACTGCTTGGATGTTTT----CCATGT------------------------------------------------------GCCTATATTAATATTTACAATAAAAGCATGATTTAGATTTTCATTTAGAAT---TTATCTTAAAT--------GCA-------TCAAATATGCAATTTTAAGTCAAGTTTTACATGTTTGGCTCAATATATCAAAATAATTTTCTGTGGTTTTAAAATAACAAGGTTTGTTGCTCTTTATATTAGACGTGT----AATCACACTGACCT-CATAAAAATAAGTTTAACTTTAATTTGAATAAAAGAATGCCACAACGAAAT---------------ACTGACCATTAAAAAAAAAA-AA---GAATAAAGGACCTTAACCCTGGGCAAACATATAAAAGCAGAGGaaagtcacccagtataatgtctggcacatagtaggcgttttgcaaatattagAGCCCATTCCCATGGTGGTGCGCACTGCACAAGACCACAGAGGTCCAGCCCTTTTATCTTTCCGGTCGCTTCCAGCCATCACCCATAGTGAATCCCGAAGGCAGCATCTCCACC-------CACAGTACT------AGACGACCACCAATGACTCCTAGTCCTCAGGGGAAACCTCCCTGCCATCTTCTT--CTTGGTGGCGGCCAATATACATTTCTTTCTTCACTTCCCAGGACGTTTGA--AGTACTTGGTGTCCCTCCCTCCAAGCTCCTCCCTTCCCTTCAGGTCTCAAGGTCTCATCCAACACTTCAAGCTCAAAATATTATATAAGCATCAAGAGGGTGAGCCCAGACAGGCACTCTTCCTTGTCCAATTTCAGGAGAATATCTCTATTCCCTGTGACCCCAGGATACACAATGGCTGTTCTACACTCAGGAATCACTACATGTGATTCCCAGGACAGG-GGCTGCAACTCTTC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73790528 1752 - 130959383 TTTattttatttggttattcaagtctcttaacattcttttaatcgaaaacagtcctcccaccagccctccttccccagccc---tttttaaacccatagcactgaagagaccaggtcattgtcttatagaatatccttcattttagatttgcctgattgtgtcttcattccctaagcttcctataaaccagtagttggatttaaagccttgataaggcccaggtggaggatttttggcaagaacacattccagttgacactgtgtacttacttacttcatGCTGTAACTC------TCATCTGGTGGTTTCATTATGGGATCTACTAgaatatacagacaatgggaagatcatatacaaaaacagaactctgacccacagtctgcagcaaccagtccaggaagccaaacaactcctgtagcctttggtcccaaatggccaggacttg----atcaatacctgccagcttccctaattcttgcctctgctttgaaaatcctttagtaggaccaaccagagaaggccaaatatgcttccctaaccaatcacataggataccctgcttctagttagctcacccacagcctccagatgccaacagcctttgatcagggctcacccgaagcctccccttttcccaccataaagctttctcactcccctgattgcctttgagtgtctg-cagtggcaaacgaccatggctgactctctggggatgtaccaagctgagaacaagtagctgttgctcattctcatttgggtgg------------tctacaattattACAGAAGTGAAGCGTGATCACAGTTAAGGTGGTAAG----AGACCGTTTACACTGTC------G------ATGAACTTCAGACTTTTTACTTCATGCCTTGCTTATACTGCTTGGATGTTTT----CCATGTGCCTATATTAATATTTACAATAAAAGCAAGATTTAGATTTTCATTTAGAATTTAGCCTATATTAATATTTACAATAAAAGCATGATTTAGATTTTCATTTAGAAT---TTATCTTAAAC----AAAGGTG-------TCAAATATGCAATTTTAAGTCAAGTTTTGCATATTTGGCTCAATATATCAAAATAATGTTCTGTAGTTTTAAAATAACAAGGTTTGTTGCTCTTTATATTAGACATGTAGTTAATTACATTGATCT-CATAAAAATAAGTTTAATTTTAATTTGAATAAAAGAATGCCACAATGAAAT---------------ACTGACCATTAAAAAAAAAA-------AATAAAGGACCTTAACCCTGGGCAAACATATAAAAGCATATGAAAGTcacccagtataatgtctgacacgtagtaggtgttttgcaaatattAGAGCCCTTTCCCATGGTGGTGCACACTGCACAAGACCAGAGAAGTCCAGACCTTTTATCTTTCTGGTCCCATCCAGTCATCACCCATAGTGAATCCCGAAGGCAGCATCTCCACC-------CACAGTGCT------AGAGGACCACTGACTCCTCCTAGTTCTCAGGGGAAACCTCCCTGCCATCTTCTT--CTTGGTGGCGGCCAATATACATTTCTTTCTTCACTTCCCAGGACGTTTGA--AGTACTTGGTGTCCCTCCCTCCAAGCTCCTCCCTTCCCTTCAGGTCTCAAGGTCTCATCCAACACTTCAAGCTCAAAATATTACATAAGCATCAAGGGGGTGAGCCCAGACAGGCACTCTTCCTTGTCCAATTTCGGGAGAAGATCTCTATTCCCTATGACCCCAGGATATACAATGGCTGTTCTACACTCAGCAATCACTACATGTGATTCCCAGGGCAGG-GGCTGCAACTCTTC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75352707 1701 - 133195287 TTTattttatttggttattcaagtctcttaacattcttttaatcgaaaacagtcctcccaccagccctccttccccagccc---tttttaaacccatagcactgaagagaccaggtcattgtcttatagaatatccttcattttagatttgcctgattgtgtcttcattccctaagcttcctataaaccagtagttggatttaaagccttgataaggcccaggtggaggatttttggcaagaacacattccagttgacactgtgtacttacttacttcatGCTGTAACTC------TCATCTGGTGGTTTCATTATGGGATCTACTAgaatatacagacaatgggaagatcatatacaaaaacagaactctgacccacagtctgcagcaaccagtccaggaagccaaacaactcctgtagcctttggtcccgaatggccaggacttg----atcaatacctgccagcttccctaattcttgcctctgctttgaaaatcctttagtaggaccaaccagagaaggccaaatatgcttccctaaccaatcacataggataccctgcttctagttagctcacccacagcctccagatgccaacagcctttgatcagggctcacccgaagcctccccttttcccaccataaagctttctcactcccctgattgcctttgagtgtctg-cagtggcaaacgaccatggctgactctctggggatgtaccaagctgagaacaagtagctgttgctcattctcatttgggtgg------------tctacaattattACAGAAGTGAAGCGTGATCACAGTTAAGGTGGTAAG----AGACCGTTTACACTGTC------G------ATGAACTTCAGACTTTTTACTTCATGCCTTGCTTATACTGCTTGGATGTTTT----CCATGT------------------------------------------------------GCCTATATTAATATTTACAATAAAAGCATGATTTAGATTTTCATTTAGAATTTATTATCTTAAAC----AAAGGTG-------TCAAATATGCAATTTTAAGGCAAGTTTTGCATATTTGGCTCAATATATCAAAATAATGTTCTGTAGTTTTAAAATAACAAGGTTTGTTGCTCTTTATATTAGACATGTAGTTAATTACATTGATCT-CATAAAAATAAGTTTAATTTTAATTTGAATAAAAGAATGCCACAATGAAAT---------------ACTGACCATTAAAAAAATAA-------AATAAAGGACCTTAACCCTGGGCAAACATATAAAAGCATATGAAAGTCACCCAGTATAATGTCTGACACGTAGTAGGTGTTTTGCAAATATTAGAGCCCTTTCCCATGGTGGTGCACACTGCACAAGACCAGAGAAGTCCAGACCTTTTATCTTTCTGGTCCCATCCAGTCATCACCCATAGTGAATCCCGAAGGCAGCATCTCCACC-------CACAGTGCT------AGAGGACCACCGACTCCTCCTAGTTCTCAGGGGAAACCTCCCTGCCATCTTCTT--CTTGGTGGCGGCCAATATACATTTCTTTCTTCACTTCCCAGGACGTTTGA--AGTACTTGGTGTCCCTCCCTCCAAGCTCCTCCCTTCCCTTCAGGTCTCAAGGTCTCATCCAACACTTCAAGCTCAAAATATTACATAAGCATCAAGGGGGTGAGCCCAGACAGGCACTCTTCCTTGTCCAATTTCGGGAGAAGATCTCTATTCCCTGTGACCCCAGGATATACAATGGCTGTTCTACACTCAGCAATCACTACATGTGATTCCCAGGGCAGG-GGCTGCAACTCTTC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73217082 1704 - 125196307 tttattttatttggttattcAAGTCTCTTAACATTCTTTTAATCGAAAACAGTCCTCCCACCagccctccttccccagccc---tttTTAAACCCATAGCACTGAAGAGACCAGGTCATTGTCTTATAGAATATCCTTCATTTTAGAATTGCCTGATTGTGTCTTCATTCCCTAAGCTTCCTATAAACCAGTAGTTGGATTTAAAGCCTTGATAAGGCCCAGGTGGAGGATTTTTGGCAAGAACACATTCCAGTTGACACTGTGTACTTACTTACTTCATGCTGTAACTC------ATATCTGGTGGTTTCATTATGGGATCTACTAGAATATACAGACAATGGGAAGATCATATACAAAAACAGAACTCTGACCCACAGTCTGCAGCAACCAGTCCAGGAAGCCAAACAACTCCTGTAGCCTTTGGTCCCAAATGGCCAGGACTTG----ATCAATACCTGCCAGCTTCCCTAATTCTTGCCTCTGCTTTGAAAATCCTTTAGTAGGACCAACCAGAGAAGGCCAAATATGCTTCCCTAACCAATCACATAGGATACCCTGCGTCTAGTTAGCTCACCCACAGCCTCCAGATGCCAACAGCCTTCGATCAGGGCTCACCCGAAGCCTCCCCTTTTCCCACCATAAAGCTTTCTCACTCCCCTGATTGCCTTTGAGTGTCTG-CAGTGGCAAACGACCATGGCTGACTCTCTGGGGATGTACCAAGCTGAGAACAAGTAGCTGTTGCTCATTCTCATTTGGGTGG------------TCTACAATTATTACAGAAGTGAAGCGTGATCACAGTTAAGGTGGTAAG----AGACCGTTTACACTGTC------G------ATGAACTTCAGACTTTTTACTTCATGCCTTGCTTATACTGCTTGGATGTTTT----CTATGT------------------------------------------------------GcctatattaatatttacaataaaagCATGATTTAGATTTTCATTTAGAAT---TTATCTTAAAC----AAAGGTG-------TCAAATATGCAATTTTAAGTCAAGTTTTGCATATTTGGctcaatatatcaaaataatgttctatagttttaaaataacaagGTTTGTTGCTCTTTATATTAGACATGTAGTTAATTACATTGATct-cataaaaataagtttaattttaatttgaataaaagaatgccacaatgaaat---------------actgaccattaaaaaaaaaaaaaaa-gaataaaggaccTTAACCCTGGGCAAACATATAAAAGCATATGAAAGTCACCCAGTATAATGTCTGACATGTAGTaggtgttttgcaaatattagaGCCCTTtcccatggtggtgcacactgcaCAAGACCAGAGAAGTCCAGACCTTTTATCTTTCTGGTCCCATCCAGTCATCACCCATAGTGAATCCCAAAGGCAGCATCTCCACC-------CACAGTGCT------AGAGGACCACCGACTCCTCCTAGTTCTCAGGGGAAACCTCCCTGCCATCTTCTT--CTTGGTGGCAGCcaatatacatttctttcttcacttCCCAGGACGTTTGA--AGTACTTGGTGTCCCTCCCTCCAagctcctcccttcccttcaggTCTCAAGGTCTCATCCAACACTTCAAGCTCAAAATATTACATAAGCATCAAGGGGGTGAGCCCAGACAGGCACTCTTCCTTGTCCAATTTCGGGAGAAGATCTCTATTCCCTGTGACCCCAGGATATACAATGGCTGTTCTACACTCAGCAATCACTACATGTGATTCCCAGGACAGG-GGCTGCAACTCTTC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72049147 1708 - 125710982 TTTattttatttggttattcaagtcccttaacattcttttaatctaaaacagtcctcccaccagccctccttccccagccc---tttttaaatgcatagcactgaagagaccaggtcactgtcttatagaatatccttcattttagatttgcctgattgtgtcttcattccctaagcttcctataaaccagtagttggatttaaagccttggtaaggcccaggtggaggatttttggcaagaacacattccagttgacactgtg----tacttacttcatgctgtaactc------atatctggtggtttcATTATGGGATCTACTAgaatatacagacaatgggaagatcatatacaaaaacagaactctgacccacagtctgcagcaaccagtccaggaagccagacaactcctgtagcctttggtcccaaatgaccaggacttg----atcattacctgccagcttccctaattcttgcctctgctttgaaaatcctttagtaggaccaaccagagaaggccaaataggcttccctaaccaatcacataggataccctgcttctagttagctcacccacagcctctagatgccaacagcctttgatcagggctcacctgaagcctccccttttcccaccataaagctttctcactcccctgattgcctttgagtgtctg-caatggcaaatgaccatggctgactctctggggatgtaccaagctgagaataagtagctgttgctcattctcatttgggtgg------------tctacaattattACAGAAGTGAAGCGTGATCACAGTTAAGGTGGTAAT----AGACCGTTTACACTGTC------A------GTGAACTTCAGACTTTTTACTTCATGCCTTGCTTATACTGCTTGGATGTTTT----CCATGT------------------------------------------------------GCCTATATTAATATTTACAATAAAAGCATGATTTAGATTTTCATTTAGAAT---TTATCTTAAAT----AAAGGTG-------TCAAATATGCAATTTTAAGTCAAGTTTTGCATATTTGGCTCAATATATCAAAATAATGTTCTGTAGTTTTAAAATAACAAGGTTTGTTGCTCTTTATATTAGACATATAGTTAATTACATTGATCT-CATAAAAATAAG------TTTAATTTGAATAAAAGAATGCCACAATGaaataaaaaaaaaagaataaaggacctttaaaaaaaaaa-aaaa-gaataaaGGACCTTAACCCTGGGCAAACATATAAAAGCatatgaaagtcacccagtataatgtctgacacatagtaggtgttttgcaaatattagAGCCCTTTCCCATGGTGGTGCACACTGCACAAGACCAGAGAAGTCCAGACCTTTTATCTTTCTGGTCCCATCCAGTCATCACCCATAGTGAATCCCGAAGGCAGCATCTCCACC-------CACAGTGCT------AGAGGACCACCGACTCCTCCTAGTTCTCAGGGGAAACCTCCCTGCCATCTTCTT--CTTGGTGGCGGCCAATATACATTTCTTTCTTCACTTCCCAGGACGTTTGA--AGTACTTGGTGTCCCTCCCTCCAAGTTCCTCCCTTCCCTTCAGGTCTCAAGGTCTCATCCAACACTTCAAGCTCAAAATATTACATAAGCATCAAGGGGGTGAGCCCAGACAGGCACTCTTCCTTGTCCAATTTCGGGAGAAGATCTCTATTCCCTGTGACCCCAGGATATACAATGGCTGTTCTACACTCAGCAATCACTACATGTGATTCCCAGGGCAGG-GGCTACAACTCTTC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75510220 1618 - 121768101 TTTA-TTTATTTGGTTATTCAAGTCTCTTAATGTTTTTTAAATCTAAAACAGTCCTCCCACCAGCCCTCCTTCCCTGGACA---CTTTTAAATCCATAGCATGAaagagaccaagtcattgtcttatagaatatccctcattttagatttgcctgattgtgtcttcattctctaaactg-ctataaaccagcagttggatttaaaggcttgataagacccaggtggaggatttttggcaccaatgcatcccagttgatgctgta----tacttacttcaTGTTGTAACTCATCATAATATCTGATGATGTCATGATGGGATCTCCTAgaatatatagacaatggccagatcatacataaaaatagaactctgacccatagtctgcaacaaccagtcccggaagccaaacaacccctgttgcctttggtcccaaatggccaggacttg----atcaatgcctgccagtttccctaattcttgcctctgctttgaaaatcctttagtagtaccaaccaga-aaagccaaatgcgcttccctaaccaatcagataggatactctgcttctagttagctcacccacagcctccagatgtggaaagtctttgatcagggctcacctgaagcctcctcttttcccaccataaagctttcttactcccctgactgcctttgagtgtctg-caatggcaagtgactgtggctgagtctctggctatataccaaactgagaataagtagcttttgctcattctcatttgggtgg------------tctacagtgatttcTGAAGTGAAGTGTGATCACAGTGAAGGTAGTAAT----AGACCCCTTACACTGTCAGTGGAA------ATGGAC-TCAGATGTTTTACTTCATGCCTTTCTTATACTGCTTGGATGTTTT----CCATGT------------------------------------------------------GCCTATATTCATATTTACAATAAAAGCATGATTTAGACTTTCGCTTAGAAT---CTATC-------------------------------------------------------------------------------------TGTGGTTTTAAAATGACAAGGTTTGTTCTTCTTTTTATTAGGCATGTAGTTAATTACACTGATCT-CATTAAAAAAA---TAAGTTTAATTTGAATAAAAGAATGCCACAGTGAAAT-------------------ACCATTAAAAA-----------GAATGAAGGACCTTAACCCTGGGAGAACATATAAAAGCATATGGAAGTCACCCAGTTTGATGTCTGATGTATAGTGGGTGTTCTGCAAATATCAGAGCCCCTTCCCATGGTGCTGCACACTGCACAAGACGGCAGGGGTCCACCCCTTTTATCTTTCTGGTCCCCTCCAGTCATCACCCATAGTGAATCCCAAAGGCAGCAACTCCACC-------CTTGGTGCT------AGAGGACCACCGATTCCTCCTAGTCCTCAACGGAAACCTCCCTGCCATCTTCTT--CTTGGTGTCTGCCAACATACATTTCTTTCTTCACTTCCCAGGACATTTGA--AGTACTTGGTGCCCCTCCCTCCAAGCTCCTCCCTTCCCTTCAGGTATCAAGGTCTCATTCAACAATTCAGGCTCAAAATACAATGGAAACCTCAAGGGGGTGAGCCCAGAAAGGAACTCTTCCTTGTCCAGTTCCAGAAGAAAACCATTATCTTCTCTAACCCCAGGATACACAGTGGCTGTTCTACACTCAGAAATCCCTGCATGTGATTCCCAGGGAAGGAGGCTGCAACTCTCC i calJac3.chr12 C 0 C 0 s canFam3.chr4 27677791 1564 + 88276631 TTCCTTATAGTTGGT--TTTATGTCTCTTAAGACATTTTTCTTTTAAAATGGTCCCTTCCATACATCTACTGCCCCCCCCCCCACTTTTGTAGACCTAGCATTGAAGAGACCAGGTGATTatcttgcagactactcctcg---tagatttgcctgtt----tcttcattccctaaatttcctataagccagtagctgaattttgtggcttgatgagatccaggtgaaacatttttggcgcgaatgcctcacaggtgatgctatg----tcctcacttcacattgcatctcatcGTAATAGCTGGTGATTTCGTTGTGAGATGGAGTATACCAATTGGACAACTGCCAGGCCATTTATAAAAATAGGACTTGGATCCACAGTCTGTCGCCaccagtccaggaagccaaaccacccccctaacagttggccccaaatagccaagatttgatccatccatacctgccagctttcataatttttgccccagcgtctag-----cttagtagaaccaaccacagaaagccaaatacgcacccctaaccaatcatgcaggacgccccactgctagttagtctgcctctagcttctcgg-gccatcagact--aatcagtgcacacctgaagcctttcttcttccc--tacactgctctcccacgaccctgcctgcctttgagtctctgccaaaggtgggccatgggggccaactccct--tcctatggctagctggg----agtagcccttgcttcttgtcatctgagtggccctcatttatttccacaGTGGTTACTGATGCTAAGTGTGGTCACAGTTCAGGTGGGAAGAGTTGGACCTCTCACCATGTC------AAAGACCATGGAA-TCTAACATTTCAATTCATGCTCCTGCCATGTATCATTGGCGGTTTCTCGCCGTGC------------------------------------------------------GCCTATGTTAATATTTGGGAGAAAAAGATGCTTTGATTTTTCACCTAGAATGTAATATTCTGAACAACAAAAAGTAAATGCTTCCAAGTATGCAATTTT-----AAGTTTTGCATATCTGGCTTAGTAAACAAAAACAATGTCCTGTTGTGTTCAAATGACA------------------------------------------------CA----------------------------------------------------------------A-----CATTTGAAAAAATT------GTGTACAGAGTCC--------------------AGAGCATATGACAGTCGCCTAGTAAACGATATGGCACAGAGTAGGTGTCCTGCA-GTATGAGGGCCCATCCCCATTGTGGCACCCTGGGCACATGA----------CCAGCCCTC---TCTTTCAGGTTATGTTAGGCCATGACGGGCACCACATCCTAGAAACAGCACTGTCACCCCCACAGCACAGTGGCATTGAAAGAGGGCCACCAACCTCTGCTGGTGCCCAGCAGAAAGGGTGCCACCGTTTCCCTCCCTGGACAGCGTCCCACG--------CTCCCTCACCTCCCAGGACCCGAGAATAACACTTGGTG-----------------------TCCCTTCACGTCTCCAGGTCCTGGCCGACACCTTAGGCTCAGAATATCCTACAAGGATGGCGGAGGTGGGGCAAGGCAGGTGCACTTACCTGTTGAATTCTAGCAGAAAACCTC---CCCCCATCACCCCAGGGGACCCAGGGTTCGTACC-TGCAGAGAAATTACC-TGTATTAAACCCCAAACAGG-GGCTGTGCCTTCTC i canFam3.chr4 I 14 I 128 e mm10.chr14 24093499 39790 + 124902244 I a score=1427059.000000 s hg38.chr10_KI270825v1_alt 17778 472 + 188315 TGCTAAGAGCTCCCATAGCCCCAGGGCTCCCCCACCCCCACCCCATATACACACACCCCTCTCCCAGTCTTCTGTGTCTTTCTCGAGGACTGGT-TAGCATTTTGGTAG--CACCTTTGCCAGGGAAGCAGGCTCCCCAG----GATGCACTTTGAACCCT--CCCCCTACTGACATGGACTTGCGTTCTCCTGCCTCTAGGCTCCTTGCCTGGCAGTTCTGCACTTTCGGACTCCCCTCCTCTAACG-----AGTCCATTTGCCACCACAGCAGTGACTGCA--GTAGGGTCACGG----CACCTGTTTTCTGtgttatgtgg-aaaaaaattaagatactgaacatt----tatgtatgctaccttctgggtgtgaagga-----gggaacatg----aattcacatttgatttagctggtatctgcagaaagcagcagtagggatttagaaatgcataaaaatagtGTTACTTTTTGGGATGAAGAGTGGCATGAGACTGata s panTro4.chr10 76388419 464 + 133524379 CACTAAGAGCTCACATAGCCCCAGGGCTCCCCCACCCCCACCCCATATACACACACCCCTCTCCCAGTCTTCTCTGTCTTTCTCGAGGACTGGT-TAGCATTTTGGTAG--CACCTTTGCCAGGGAAGCAGGCTCCCCAG----GATGCACTTTGAACCCT--CGCCCTACTGACATGGACTTGCGTTCTCCTGC--------TCCTTGCCTGGCAGTTCTGCACTTTCGGACTCCCCTCCTCTAACG-----AGTCCATTTGCCACCACAGCAGTGACTGCA--ATAGGGTCACGA----CACCTGTTTTCTGtgttatgtgg-aaaaaaattaagatactgaaaatt----tatgtatgctaccttctgggtgtgaagga-----gggaacatg----aattcacatttgatttagctggtatctgcagaaagcagcagtagggatttagaaatgcataaaaatagtGTTACTTTTTGGGATGAAGAGTGGCATGAGACTGata i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76056185 472 - 133410057 TGCTAAGAGCTCACATAGCCCCAGGGCTCCCCCACCCCCACCCCATACACAGACACCCCTCTCCCAGTCTTCTCTGTCTTTCTCGAGGACTGGT-TAACATTTTGGTAG--CACCTTTACCAGGCAAGCAGGCTCCCCGG----GATGCACTTTGAACCCT--CGCCCTACTGACATGGACTTGCGTTCTCCTGCCTCTAGGCTCCTTGCCTGGCAGTTCTGCATTTTCGGACTCCCCTCCTCTAACG-----AGTCCATTTGCCACCACAGCAGTGACTGCA--ATAGGGTCACGA----CACCTGTTTTCTGTGTTATGTGG-AAAAAAATAAAGATACTGAACATT----TATGTATGCTACCTTCTGGGTGTGAAGGA-----GAGAACATG----AATTCACATTTGATTTAGCTGGTATCTGCAGAAAGCAGCAGTAGGGATTTAGAAATGCATTAAAATAGTGTTACTTTTTGGGATGAAGAGTAGCATGAGACTGata i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34998563 472 + 104879549 TGCTAAGAGCTCACATAGCCCCAGGGCTccccgacccccaccccacacacacacacccctctcccaGTCTTCTCTGTCTTTCTCGAGGACTGGT-TAGCGTTTTGGTAG--CACCTTTGCCAGGGAAGCAGGCTCCCCGG----GATGCACTTTGAACCCT--CGCCCTACTGACATGGACTTGCGTTCTCCTGCCTCTAGGCTCCTCGCCTGGCAGTTCTGCATTTTCGGACTCCCCTCCTCTAACG-----AGTCCATTTGCCACCACAGCAGTGACTGCA--ATAGGGTCACGA----CACCTGTTTTCTGTGTTATGTGT-AAAAAAATTAAGATACTGAACATT----TATGTATGCTACCTTCTGGGTGTGAAGGA-----GGGAACATG----AATTCACATTTGATTTAGCTGGTATCTGCAGAAAGCAGCAGTAGGGATTTAGAAATGGATAAAAGTAGTGTTACTTTTTGGGATGAAGAGTGGCATGAGACTGATA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73792280 464 - 130959383 TGCTAAGAGCCCTCAGAGCCCCAGGGCTCCCCCACCCCCACCCCATACACACACACAC----CCCAGTCTTC----TCTTTCTTGAGGACTCGT-TAGTGTTTTGGTAG--TACCTTTGCCAGGGAAGCAGGCTCTCCGG----GATGCACTTTGAA-CCT--TACCCTACTGACATGGACTTGCGTTCTCTTACCTCTAGGCTCCTTGCCTGGCAGTTCTGCATTTTCGGACTCCCCTCCTCTGACG-----AGTCCATTTGCCACCACAGCAGTAACTGCA--ATGGGGTCACGA----CACCTGTTTTCTGTGTTATGTGGAAAAAAAATTAAGATACTGAACATT----TATGTATGCTACCTTCTGGGTGTGAAGAA-----GGGAGCAGG----AATTCACATTTGATTTAGCTGGTATCTGCAGAAAGCAGCAGTAGGGATTAAGAAATGGATAAAAATAGTGTTACTTTTTGGGATGAAGAGTGGCATGAGACTGata i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75354408 468 - 133195287 TGCTAAGAGCCCACAGAGCCCCAGGGCTcccccacccccaccccatacacacacacac----ccGAGTCTTCTCTGTCTTTCTTGAGGACTCGT-TAGTGTTTTGGTAG--TACCTTTGCCAGGGAAGCAGGCTCTCCGG----GATGCACTTTGAA-CCT--TACCCTACTGACATGGACTTGCGTTCTCTTACCTCTAGGCTCCTTGCCTGGCAGTTCTGCATTTTCGGACTCCCCTCCTCTGACG-----AGTCCATTTGCCACCACAGCAGTAACTGCA--ATGGGGTCACGA----CACCTGTTTTCTGTGTTATGTGGAAAAAAAATTAAGATACTGAACATT----TATGTATGCTACCTTCTGGGTGTGAAGAA-----GGGAGCAGG----AATTCACATTTGATTTAGCTGGTATCTGCAGAAAGCAGCAGTAGGGATTAAGAAATGGATAAAAATAGTGTTACTTTTTGGGATGAAGAGTGGCATGAGACTGata i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73218786 468 - 125196307 TGCTAAGAGCCCACAGAGCTCCagggctcccccacccccacctcatacacacacacac----cccagtctTCTCTGTCTTTCTTGAGGACTCGT-TAGTGTTTTGGTAG--TACCTTTGCCAGGGAAGCAGGCTCTCCGG----GATGCACTTTGAA-CCT--TACCCTACTGACATGGACTTGCGTTCTCTTACCTCTAGGCTCCTTGCCTGGCAGTTCTGCATTTTCGGACTCCCCTCCTCTGACG-----AGTCCATTTGCCACCACAGCAGTAACTGCA--ATAGGGTCACGA----CACCTGTTTTCTGTgttatgtggaaaaaaaattaagatactgAACATT----TATGTATGCTACCTTCTGGGTGTGAAGGA-----GGGAGCAGG----AATTCACATCTGATTTAGCTGGTATCTGCAGAAAGCAGCAGTAGGGATtaagaaatggataaaaataGTGTTACTTTTTGGGATGAAGAGTGGCATGAGActgata i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72050855 468 - 125710982 TGCTAAGAGCCCACATAGCCCCAGGGCTcccccacccccaccccatacacacacacac----cccAGTCTTC----TCTTTCTTGAGGACTCGT-TAGCGTTTTGGTAG--TACCTTTGCCAGGGAAGCAGGCTCTCCGG----GATGCACTTTGAA-CCT--TACCCTACTGACATGGACTTGCGTTCTCTTACCTCTAGGCTCCTTGCCTGGCAGTTCTGCATTTTCGGACTCCCCTCCTCTGACG-----AGTCCATTTGCCACCACAGCAGTAACTGCA--ATAGGGTCACGA----CACCTGTTTTCTGtgttatgtggaaaaaaaattaagatactgaacatttatgtatgtatgctaccttctgggtgtgaagga-----gggagcagg----aattcacatttgatttagctggtatctgcagaaagcagcagtagggattaagaaatggataaaaatagtGTTACTTTTTGGGATGAAGAGTGGCATGAGACTGata i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75511838 471 - 121768101 TGCTAAGAGCTCACGTAGCCCCCGGGCTCCCCTACCCCCACCCCATCCACGCACACCCCTCTCCCA-TCTTCTCTGGCCTTCTCCAGGGCTGGC-TAGCATTCTGGTAG--CACCTTTGCCAGGGAAGCAAGCTCCCGGGACATGCTTCACTTCGAGTCCT--TGCCCCACTGACTCGGACTTGCGTTCACCTGCCTCTGGTCTCTTCACCTGGCAGCTTTGCATTTTCAGATTCAGCTTCTCCAGTG-----AGTCCATTTGCCACCACAGCAGTGATTGCA--ATAGAGGGACAG----CACGTGTTTTCTGTATTATGTGA-AAATAATTTAAGATACAGAACATT----TATGTATGC-ATCTTCTGGATG---AGGA-----GGGAACAGA----AATTCACATTTGATTTAGCTGGTATCTGCAGAAAGCAGCAGTAGGGATTAAGAAATGGATAAAAACTGTGTTACTTTTTGGGATGAAGAGTGGCATGAAACTGAGA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27679483 466 + 88276631 TGCTGGTAGCCCGCACAGCCTCAGGAAACTTTACACCCCAGCCCCTCTCCCCGAACGTCTATCCCCATCTCT--GGCCTTTCCTGAGGGGCCGTGTGGCATCTTAGCAGGCGCCCTGTGTCAGGGAAACAGGCTCCACTT----GATGGCACGCGAC-CCTTGTGCCCCCCTCCCATGGGCTTCTAGTTTCCTGCCTCAAG-------GCCTGATGGCTCCCTGTTT----------CTGTCCTAATGGTCACAGCCCGTCTGCTGGTGCAGTAGCGTGTGCAGTATAAGGCCAAGGGCCCCACCAGGACTTTGGGTTACGTGG-GAAAAGGCGGA---ACAGAGTACT----C---TGTGCTG-CTTCTGAGTGAGAAAGAGTCTGGGGGGCAGGGGGTGACTCACATCTGATTTAGCTGGAATCTCTACCAGAATGCCACAGGGAC----AGACTGATGAAAGTGAGTCCTCTTTCTGGGATGAGGGGTAGAATGAACCTGAGA i canFam3.chr4 I 128 C 0 e mm10.chr14 24093499 39790 + 124902244 I a score=2300.000000 s hg38.chr10_KI270825v1_alt 18250 1 + 188315 t s panTro4.chr10 76388883 1 + 133524379 t i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76056657 1 - 133410057 t i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34999035 1 + 104879549 C i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73792744 1 - 130959383 t i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75354876 1 - 133195287 t i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73219254 1 - 125196307 t i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72051323 1 - 125710982 t i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27679949 1 + 88276631 T i canFam3.chr4 C 0 I 21 e mm10.chr14 24093499 39790 + 124902244 I e calJac3.chr12 75512309 0 - 121768101 C a score=5595989.000000 s hg38.chr10_KI270825v1_alt 18251 2404 + 188315 ctatata--------tatatctatatagatatagatatatatTTGGAGGCATTGAAACCTGCTTGATTTATTCTGATTATTTAATACACACTGACGCAACTGTGATCCCAAAGAGTGCAAAGTTAAA-GCCTTCAACTGCAGCTGAGGAAGAGGGCAGGAATGGTACACCTCGGGACGGTGGTGAGTCAGGAATGACAGGCAGG-TAGCCATGACCAGGGCAGCTTCCTCCCCAGGGCCAGGAACAGGGGAGTAGCCTGAGGAGCAGGACCCAAGGGTAGCCCAGGGCCGGGGAAGGGGGCAGAGACCTCCCCTTGGCCTAGGTCAGGAGCTCAGAAGTGCCACATGGCTGAGgggacag-gaccctggaagggccagaggcagggccaggACAGCACCATTTCCTGGGGGTCTGGGGGCAGGAAGCTGCCCTAGAGAAGAAGCCAGGAGGGGTTGCCTGCCCCTGGGGTGGGGGCCAGGCTGAAGGAGGCTGCAGCAGGCTGCAGCAAGAAAGACCTGAGGCAGGTGCAGGGCCTGAGAGCCCAGCTAGCTGAGCAGGGGGGGCTCCCAGGGCAGCCTGGCCCAGGAAGCAGTCCTGACTCTGCAGGGGATGCCAAGCAAGGGGCCGCAGACCCCTCAGGACCTCCCCTCTTCTCTCCCTGGAAAGGAGCTGGGGAACCCATAGTGCAAATCTGTGTACCACTCAGTGATGGAGGGAGACTGTGCCCCAAGGTGGACACTG-------GGGTGCACCCCCTCCACCACCTCAGCCTCCACCGCTGTCCTCATCACAGCTGCTTCTCATACGAGTGCAGGCCATGGACACCACCCTTGATCTGGGCCGACATGGTCTGCTTCTCAAACTTGAGCTCCCCTGAGTACATCATGGACCAAAGGACAGACAGGCTGCGGGCCCCGATATCCTGGCAGCTGTGCTGGATGCCCGCTATGAGGTAGGGCACGAACTTCTGAATGGACCCTTTGTCCTGGATGGAGCCCGAGACACCCTGTGCGATCTTCACCTTATCCCCCTTGCTGAAGTATCGTTTCTGGCTGCTGCTGCTCTTCTCCATGGCATCCAGTGAGCCCATGCCCTGGTACTTCTTGAGCTGCACCCTTTCTAAGAAGAAGTACTCACCAGGTGCCTCCGTGGTGGTGGCCAGCA-GGAGCCCATCATCACTGTGGAGGCTCCAAGGGCCAGGGCCTTGACCACGTGCCCCACAGTCTGGATGCCACCATCGACTATGATGGGCACACCAAAGCACTGGGCATACTTGGCCACCTTGTACACAGCAGTGCCCTGGGGCCAACCGCAGGCCATCACTTTCTGGGTAATGCAGATGGAGCCGTAGCCCATGCCCACATGCAGCCCGTCCACACGAGCGTCCATCAGGTTCTTGGCCTGGGCTGCTGTCACCACGTT-CCCCCCAATCACCTGGAGGTGGGGGTACTTCTGTTTGATGTAATGCACCATGGTGATCTGATACACCGAGCTCCCTTGGGATGAGTCCAAGACTACAACATTGACACCCGCCTGGGTGAGCAGGTCCAGGTGGCATTCGTCATCCTCACGGGTGCCCACAGCTGCCCTGCACAGCAGCTGTTTGTGGGAATCCTTGGAGGCCAGAGGGTAGTCTCGATTCTTCTTCAGGTCAGTGCGGGCAATGATGGCCACCAGCTCATCGCGATCACTGACGATAGGCAGCTTCCCTTTCTTGTTACGCTGCAGGATCTCATTTGCCTCTTTCAACGTCACACCTTTCAACGTCAGCCACCACCAGTTCCATCCTTGGCGTCATCACCTCACTGATGAAGGTGGCGTGCTCCTTCTTAGCAAGAAAG---TCGACGTCTCGGGAGGTGATGATGCCCACCAGCTTGCTGCCCATGGTGCCCGTCTCAGTGAGGGGGATACCAGAGAAGCCATGCAGCATCTTGGCCTCCAAGCACATCACCCACGGTGTGCAAGGGGCTCAGCACCACAGGGTCCGTGATGAAGCCCTGTTCAAACTTCTTGACCTTCAGCACCTCATTGGCCTCGAACTCTGGGGTGCAGTTGTGGTGAATGAAACCAATACCTCCCATCAGAGCCATCCCGATTGCCATGTCAGCCTCTGTCAGTGTCCACAGGGGAGGAGATCAGCGGCGTCTTCAGCCCTTGTGGGTCAGGGCTGAGGTCAGGTCCACCTCATCATCAGCTATGAAGTCTATGAATCCTGGGAGAATCAGGAAGTCATTGTAGGT--GAGGCCGTTGGTGCTGGTGAAGAGCTGCTGCGCGGTGAGCCCGTCCTCGGGCACGTAGCTGGTGCCGCTGCTGATCAGGTAGTCTGCCAGGCTGCCGTGACACCCCGCGACCCGACATAAACACCCGAGTGGCCACCTGCCGCAGGCACACTGCCACTGCGGGCCGGGCA------------------CAGGGGC s panTro4.chr10 76388884 2399 + 133524379 ctatatc--------tatatctatatagatatagatatatatTTGGAGGCATTGAAACCTGCTTGATTTATTCTGATTATTTAATACACACTGACGCAACTGTGATCCCAAAGAGTGCAAAGTTAAAAGCCTTCAACTGCAGCTGAGGGAGAGGGCAGGAATGGTACACCTCGGGACGGTGGTGAGTCAGGAATGACAGGCAGGGTGGCCATGACCAGGGCAGCTTCCTCCCCAGGGCCAGGAACAGGGGAGTAGCCTGAGGAGCAGGACCCAAGGGTAGCCCAGGGCCGGGGAAGGGGGCAGAGACCTCCCCTTGGCCTAGGTCAGGAGCTCAGAAGTGCCACATGGCTGAGGGGACAG-GACCCCGGAAGGGCCAGAGGCAGGGCCAGGACAGCACCATTTCCTGGGGGTCTGGGGGCAGGAAGTTGCCCTAGAGAAGAAGCCAGGAGGGGTTGCCTGCCCCTGGGGTGGGGGCCAGGCTGAAGGAGGCTGCAGCAGGCTGCAGCAAGAAAGACCTGAGGCAGGTGCAGGGCCTGAGAGCCCAGCTAGCTGAGCAGGGGGTGCTCCCAGGGCAGCCTGGCCCAGGAAGCAGTCCTGACTCTGCAGGGGATGCCAAGCAAGGGGCCGCAGACCCCTCAGGACCTCCCCTCCTCTCTCCCTGGAAAGGAGCTGGGGAACCCATAGTGCAAATCTGTGTACCACTCAGTGATGGAGGGAGACTGTGCCCCAAGGTGGACACTG-------GGGTGCACCCCCTCCACCACCTCAGCCTCCACCGCTGTCCTCATCACAGCTGCTTCTCATACGAGTGCAGGCCATGGACACCACCCTTGATCTGGGCCGACATGGTCTGCTTCTCAAACTTGAGCTCCCCTGAGTACATCATGGACCAAAGGACAGACAGGCTGCGGGCCCCGATATCCTGGCAGCTGTGCTGGATGCCCGCTATGAGGTAGGGCATGAACTTCTGAATGGACCCTTTGTCCTGGATGGAGCCCGAGACACCCTGTGCGATCTTCACCTTATCCCCCTTGCTGAAGTATCGTTTCTGGCTGCTGCTGCTCTTCTCCATGGCATCCAGTGAGCCCATGCCCTGGTACTTCTTGAGCTGCACCCTTTCTAAGAAGAAGTACTCACCAGGTGCCTCCGTGGTGATGGCCAGCA-GAAGCCCATCATCACTGTGGAGGCTCCAAGGGCCAGGGCCTTGACCACGTGCCCCACAGTCTGGATGCCACCATCGACTATGATGGGCACACCAAAGCACTGGGCATACTTGGCCACCTTGTACACAGCAGTGCCCTGGGGCCAACCGCAGGCCATCACTTCCTGGGTAATGCAGATGGAGCCGTAGCCCATGCCCACATGCAGCCCGTCCACACGAGCGTCCATCAGGTTCTTGGCCTGGGCTGCTGTCACCACGTT-CCCCCCAATCACCTGGAGGTGGGGGTACTTCTGTTTGATGTAATGCACCATGGTGATCTGATACACCGAGCTCCCTTGGGATGAGTCCAAGACTACAACGTTGACACCCACCTGGGTGAGCAGGTCCAGGTGGCATTTGTCATCCTCACGGGTGCCCACAGCTGCCCCGCACAGCAGCTGTTTGTGGGAATCCTTGGAGGCCAGAGGGTAGTCTCGATTCTTCTTCAGGTCAGTGCGGGCAATGATGGCCACCAGCTCATCGCGATCACTGACGATAGGCAGCTTCCCTTTCTTGCTACGCTGCAGGATCTCATTTGCCTCTTTCAACGTCACACCTTTCAACGTCAGCCACCACCAGTTCCATCCTTGGCGTCATCACCTCACTGATGAAGGTGGTGTGCTCCTTCTTAGCAAGAAAG---TCGACGTCTCGGGAGGTGATGATGCCCACCAGCTTGCTGCCCATGGTGCCCGTCTCAGTGAGGGGGATACCAGAGAAGCCATGCAGCATCTTGGCCTCCAAGCACATCACCCACGGTGTGCAAGGGGCTCAGCACCACAGGGTCCGTGATGAAGCCCTGTTCAAACTTCTTGACCTTCCGCACCTCATTGGCCTCGAACTCTGGGGTGCAGTTGTGGTGAATGAAACCAATACCTCCCATCAGAGCCATCCCGATTGCCATGTCAGCCTCTGTCAGTGTCCATAGGGGAGGAGATCAGCAGCGTCTTCAGCCCTTGCGGGTCAGGGCTGAGGTCAGGTCCACCTCATCATCAGCTATGAAGTCTATGAATCCTGGGAGAATCAGGAAGTCATTGTAGGT--GAGGCCGTTGGTGCTGGTGAAGAGCTGCTGCACGGTGAGCCCGTCCTCGGGCACGTAGCTGGTGCCGCTGCTGATCAGGTAGTCTGCCAGGCTGCCGTGACACCCCACGACCCAACATAAACACCCGAGTGGCCACCTGCCGCAGGCACACTGCCGCTGCGGGCCGGGCA------------------------- i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76056658 2406 - 133410057 ctatata--------tatatctatatagatatagatatatatTTGGAGGCGTTGAAACCTGCTTGATTTATTCTGATTATTTAATACACACTGACGCAACTGTGATCCCAAAGTGTGCAAAGTTAAA-GCCTTCAACTGCAGCTGAGGGAGAGGGCAGGAATGGCACACCTGGGGACGGTGGTGAGTCAGGAATGACAGGCAGG-TGGCCATGAC-----CAGCCTCCTCCTCAGGGCCAGGGACAGGGGAGTAGCCTGAGGAGCAGGACCCAAGGGTAGCCCAGGGCCGGGGAAGGGGGCAGAGACCTCCCCTTGGCCTAAGTCAGGAGCTCAGAAGTGCCACATGCCTGAGGGGACAG-GACCCCGGAAGGGCCAGAGGCAGAGCCAGGAGAGCACCATTTCCTGGGGATCTGGGGGCAGGGAGGTGCCCTAGAGAAGAAGCCAGGAGGGGTTGCCTGCCCCTGGGGTGGGGGTCAGGCTGAAGGAGGCTGCAGCAGGCTGCAGCAAGAAAGACCTGAGGCAGGTGCAGGGCCTGAGAGCCCAGCTGGCTGAGCAGGGGG-GCTCCCAGGGCAGCCTGGCCCAGGAAGCAGTCCTGACTCTGCAGGGGATGCCAAGCAAAGGGCCGCAGACCCGTCAGGACCTCCCCTCCTCTCTCCCTGGAAAGAAGCTGGGGAACCTGTAGTGCAAATCTGTGTACCACTCAGTGATGGAGGGAGACTGTGCCCCAAGGTGGACACTG-------GGGTGCACCCCCTCCACCACCTCGGCCTCCACCGCTGTCCTCAGTACAGCTGCTTCTCGTAAGAGTGCAGGCCATGGACACCACCCTTGATCTGGGCTGACATGGTCCGCTTCTCAAACTTGAGCTCCCCTGAGTACATCATGGACCGAAGGACAGACAGGCTGCGGGCCCCGATATCCTGGCAGCTGTGCTGGATGCCCGCTATGAGGTAGGGCGAGAACTTCTGAATGGATCCTTTGTCCTGGATGGAGCCCGAGACACCCTGTGCGATCTTCACCTTATCCCCCTCGCTGAAGTATCATTTCTGGCTGCTGCTGCTCTTCTCCATGGCATCCAGTGAGCCCATGCCCTGGTACTTCTTGAGCTGCACCCTTTCTAAGAAGAAGTACTCACCGGGTGTCTCCGTGGTGGTGGCCAGCA-GAAGCCCATCATCACTGTGGAGGCTCCAAGGGCCAGGGCCTTGACCACGTGCCCCACGGTCTGGATGCCGCCATCAACTATGATGGGCACACCAAAGCACTGGGCATACTCGGCCACCTTGTACACAGCAGTGCCCTGGGGCCAACCGCAGGCCATCACTTCCTGGGTGATGCAGATGGAGCCGTAGCCCATGCTCACGTGCAGCCCGTCCACACCAGCGTCAATCAGGTTCTTGGCCTGGGCTGCTGTCACCACGTT-CCCCGCAATCACCTGGAGGTGGGGGTACTTCTGTTTGATGTAATGCACCATGGTGATCTGATACACCAAGTTCCCTTGGGACGAGTCCAAGACTATGACGTTGATGCCCGCCTGGGTGAGTAGGTCCAGGTGGTATTTGTCATCCTCACGGGTGCCCACAGCTGCCCTGCACAGCAGCTGTTTGTGGGAATCCTTGGAGGCCAGAGGGTAGTCTCGATTCTTCTTCAGGTCAGTGCAGGCAATGATGGCCACCAGCTCATCGTGATCACTGACGATAGGCAGCTTCCCTTTCTTGCTATGCTGCAGGATCTCATTTGCCTCTTTCAACGTCACGCCTTTCAACGTCAGCCACCACCAGTTCCATCGTTGGCATCATCACCTCACTGAGGAAGGTGGTGTGGTCCTTCTCAGCAAGAAAG---TTGATGTCTCGGGAGGTGACGATGCCCACCAGCTTGCTGCCCATGGTGCCTGTCTCAGTGAGGGGGATACCAGAGAAGCCATGCAGCATCTTGGCCTCC-AGCACATCACCCACGGTGTGCGAGGGGCTCAGCACCACGGGGTCCATGATGAAGCCCTGTTCAAACTTCTTGACCTTCTGCACCTCGTTGGCCTGGAACTCTGGGGTGCAGTTGTGGTGAATGAAACCAATACCTCCCATCAGAGCCATCCCGATTGCCACATCAGCCTCTGTCAGTGCCCATAAGGGAGGAGATCAGTGGCGTCTTCAGCCCTTGCAGGTCAGGGCTGAGGTCAGGTCTACCTCATCATCAGCTATGAAGTCTATGAATCCTGGGAGAATCAGGAAGTCACTGTAGGT--GAGGCCGTTGGTGCTGGTGAAGAGCTGCTGCGCGGTGAGCCCGTCCTCAGGCACTTAGCTGGTGCTGCTGCTGATCAGGTAGTCTGCCAGGCTGCCGTGACACCCCACGACCCGACATAAACACCCGAGTGGACACCTGCCGCAGGCACACTGCCGCTGTGGGCCGGGCA---------GGCTGGGAACAGGGGC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 34999036 2408 + 104879549 Ctatata----tatctatatctatatagatatagatatatatTTGGAGGCGTTGAAACCTGCTTGATTTATTCTGATTATTTAATACACACTGACGCAACTGTGATCCCAAAGTGTGCAAAGTTAAA-GCCTTCAACTGCAGCTGAGGGAGAGGGCAGGAATGGTACACCTGGGGACGGTGGTGAGTCAGGAATGACAGGCAGG-TGGCCATGACCAGGGCAGCCTCCTCCCCAGGGCCAGGGACAGGGGAGTAGCCTGAGGAGCAGGACCCAAGGGTAGCCCAGGGCCAGGGAAGGTGGCCGAGACCTCCCCTTGGCCTAGGTCAGGAGCTCAGAAGTGCCACATGGCTGAAGGGACAG-GACCCCGGAAGGGCCAGAGGCAAGGCCAGGAGAGCCCCATTTCCTG-------GGGGGCAGGGAGGTGCCCTAG---AGAAGCCAGGAGGGGTTGCCTGCCCCTGAGGTGGGGGCCAGGCTGAAGGAGGCTGCAGCAGGCTGCAGCAAGAAAGACCTGAGGCAGGTGCAGGGCCTGAGAACCCAGCTGGCTCAGCAGGGGG-GCTCCCGGGGCAGCCTGGCCCAGGAAGCAGTCCTGACTCTGCAGGGGATGCCAAGCAAGGGGCCGCAGACCCCTCAGGACCTCCCCTCCTCTCTCCCTGGAAAGGAGCTGGGGAATCCGTGGTGCAAATCTGTGTACCACTCAGTGATGGAGAGAGACTGTGCCCCAAGGTGGACACTG-------GAGTGCACCCCCTTCACCACCTCGGCCTCCACTGCTGTCCTCAGTACAGCTGCTTCTCGTAAGAGTGCAGGCCATGGACACCACCCTTGATCTGGGCCGATATGGTCCGCTTCTCAAACTTGAGCTCCCCTGAGTACATCATGGACCAAAGGACAGAAAGGCTGTGGGCCCCGATAACCTGGCAGCTGTGCTGGATGCCCGCTATGAGATAGGGCATGAACTTCTGAATGGACCCTTTGTCCTGGATGGAGCCCGAGACACCCTGTGTGATCTTCACCTTATCCCCCTCGCTGAAGTATTGTTTCTGGCTGCTGCTGCTCTTCTCCATGGCATCCAGTGAGCCCATGCCCTGGTACTTCTTGAGTTGCACCCTTTCTAAGAAGAAGTACTCACCGGGTGCCTCCATGGTGGTGGCCAGCA-GGAGCCCATCATCACTGTGGAGGCTCCAAGGGCCAGGGCCTTGACCACGTGCCCCAAGGTCTGGATGCCGCCATCGACTATGATGGGCACACCAAAGCACTGGGCATACTTGGCCACCTTGTACACAGCAGTGCCCTGGGGCAAACTGGAGGCCATCACTTCCTGGGTGATGCAGATGGAGCTGTAGCCCATGCCCACATGCAGCCCGTCCACACCAGCGTCAATCAGGTTCTTGGCCTGGGCTGCTGCCACCACGTTCCCCCCCAATCACCTGGAGGTGGGGGTACTTCTGTTTGATGTAATGCACCATGGTGATCTGATACACCGAGTTCCCTTGGGACGAATCCAAGACTATGACGTTGACGCCCACCTGGGTGAGCAGGTCCAGGTGGTATTTGTCATCCTCATGGATGTCTACAGCTGCCCCGCACAACAGCTGTTTGTGGGAATCCTTGGAGGCCAGAGGGTAGTCTCGATTCTTCTTCAGGTCAGTGTGGGCAATGATGGCCACCAGCTCATCGTGATCACTGACGATAGGCAGCTTCCCTTTCTTGCTATGCTGCAGGATCTCATTTGCCTCTTTCAACGTCACGCCTTTCAACGTCAGCCACCACCAGTTCCATCCTTGGCGTCATCACCTCACTGAGGAAGGTGGTGTGGTCCTTCTCAGCAAGAAAG---TCGACGACTCAGGAGGTGATGATGCCCACCAACTTGCTGCCCATGGTGCCCGTCTCAGTGAGGGGGATACCAGAGAAGCCATGCAGCATCTTGGCCTCC-AGCACATCACCCACGCTGTGCAAGGGGCTCAGCACAACGGGGTCCGTGATGCAGCCCTGTTCAAACTTCTTGACCTTCCGCACCTCGTTGGCCTGGAACTCTGGGGTGCAGTTGTGGTGAATGAAACCAATACCTCCCATCAGAGCCATCCTGATTGCCATGTCAGCCTCTGTCAGTGTCCACAGGGGAGGAAATCAGCAGTGTCTTCAGCCCTTGTGGGTCAGGGCTGAGGTCAAGTCCACCCCATCATCAGCTATGAAGTCTATGAATCCTGGGAGAATCAGGAAGTCGTTGTAGGTAAGAGGCCGTTGGTGCTGGCGAAGAGCTGCTGCACGGTGACCCCGTCCTCGGGCACGTAGCTGGTGCCGCTGCTGATCAGGTAGTCTGCCAGGCTGCCGCGACACCCCGCGACCTGACATAAACAACAGAGTGGCCACCTGCCGCAGGCACACTGCCGCTGCGGGCCGGACA---------GGCCGGGGACAGGGAC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73792745 2394 - 130959383 ctatatatatgtatctatatatctgtacatagatatagataCTTGGAGGCGTTGAAACCTACTTGATTTATTCTGATTATTTAATACACACTGATGTAACTGTGATCCCAAAGTGTGCAAAGTTAAA-GCCTTCAACTGCAGCTGAGG-AGAGAGCAGGAATTGTACACCTGGGGACGGTGGTGAGTCAGGAATGACAGGCAGG-TGGCCATGACCAGGGCAGCCTCCTCCCCAGGGCCAGTGACAGGGGAGTGGCCTGAGAAGCAGGACCCAAGGGTAGCCCAGGGCTGGGGAAGGGGGCAGAGACCTCCCCTTGGCCTAGGTCAAGAGCTCAGAAGTGCCACATGGCTGAGGGGGCAGCGGCCCTGGAAGGGCCAGAGGCAGGGCCAGGAGAGCACCATTTCCTGGGGGGCTGGGGGCACGGAGGCGTCCTACAGGAGAAGCCAGGAGGAGCCTCCTGCCCCTGGGGTGGGGGCCAGGCTGGAGG-----------------AGCAAGAAAGACCTAGGGCAGGTGCAGGGCCTGAGAGTCCAGCTGGCCGGGCTGGGGGTGCTCCCAGGGCAGCCTGGCCCAGGGAGCAGTCCTGACTCTGCAGGGGATGCTGAGCAAGAGGCCACAGACCCCTCAGGACCTCCCCTCCTCTCTCCCTAGAAAGGAGCTGGGGAACCTGTAGTGCAAATCTGTGGATCACTCAGTGATGGAGGGAGGTTGTGCCCGAAGGTGGACACTG-------GGGTGCACCCCTTCCACCACCTCAGCTTCCACTGCTGTCCTCGGTATAGCCGCTTCTCGTAAGAGTGCAGGCCATGGACGCCACCCTCGATCTGGGCCGACATGGTCCGCTTCTCAAACTTGAGGTCTCCTGAGTACATCATGGATCGAAGGACAGACAGGCTGTGGGTCCCGATATCCTGGCAGCCATGCTGGATGCCCACTATGAGACAGGGCTCGAACTTCTGAATGGACCCTTTGTCCTTGATGGAGCCCAAGACACCCTGTGCGATCTTTACCTTATCCCCCTCGCTGAGGGGGGATTTCTGGCTGCTTCTGCTCTTCTCCATGGCATCCAGTGAGCCCATGCCCTGGTACTTCTTGAGCTGCACCCCGTCT---GAGAAGTACTCGCCAGGTGCCTCCACGGTGGTGGCCAGCAGGGAGCCCATCATCACTGTGGAGGCTCCAAGGGCCAGGGCTTTGACCACATGCCCCATGGTCAAG--------ATCGGCTATGATGGGCACATCAAAGCACTGGGCATACTCGGCCACCTTGTACACAGCACTGCCGTGGATCCGACCACAGGCCATCACTTCCGGAGTGATGCAGATGGAGCCGCAGCCCATGCCCAGGCACAGCCCATCCACACCAGCATCAATCAGGTTCTTGGCCTGGGCTGCTGTCACCACGTT-CCCCCTAATCACCTGGAAGTGGGGCTACTTCTGTTTGATGTAATGCACCATGGTGATCTGATACACTGGGTTCCCTTGGGACGAGTCCAAGACTATGACGTTGACGCCCGCCTGGGTGAGCAGGTCCAGGCAGTATTTGTCATCCTCACGGGTGCCCACAGCTGCCCCCCACAGCAGCAGCTTGTGGCAATCCTTGGAGGTCAGAGGGTAGTCTCGATT-TTCTTCAGGTCGGTGTGGGCAATGATGGCCACCAGCTCATCACGATCACTGACAATAGGCAGCTTCCCTTTCTTGCTACACTGCAGGACCTCATTTGCCTCTTTCAACGTCATGCCTGCTGG----GGCCACCACCAGTTTCATCCTTGGCGTCATTATCTCACTGAGGAAGGTGGTGTGGTCCCTCTCAGCAAGATGTCCCTTGACATCTCGGGAGGTGACGATGCCCACCAGCTTGCTGCCCATGGTGCCCGTCTCAGTGAGGAGGATACCAGAGAAGCCATGCTACATCTTGGCCTCC-AGCACATCACCCACGGTGTGCAAGGGGCTCAGCATCACGGGGTCTGTGATGAAGCCCTGTTCAAACTTCTTGACCTTCCGCACCTCGTTGGCCTGGCACTCTGGGGTGCAGTTGTGGTGAATGATACCAATACCTTCCATCAGAGCCATCCCGATTGCCATGTCAGCCTCTGTCAGTGTCCACAGGGAAGGAGATCAGCGGCGTCTTCAGCCTTTGCGGGTCAGGGCTGAGGTCAGGTCCACC---TCATCAGCTATGAAGTCTATGAATCCTAGGAGAATCAGGAAGTCGTTGTAGGT--GAGGCCGTTGGCGCTGGTGAAGAGCTGCTGCGCGGTGAGCCTGTCCTCGGGCACGTAGCCGGTGCCGCTGCTGATCAGGCAGTCTGCAAGGCTGCTGCGAGA-CCTGCAA-CGGACATAAACAACTGAGTGGCCACCTG-CACAGCCACACTGCCGCCACAGGCCAGGCAGGCCAGGCGGGCCAGGGGCAGGGGC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75354877 2401 - 133195287 ctatatatatgtatctatatatctgtacatagatatagataCTTGGAGGCGTTGAAACCTACTTGATTTATTCTGATTATTTAATACACACTGATGTAACTGTGATCCCAAAGTGTGCAAAGTTAAA-GCCTTCAACTGCAGCTGAGG-AGAGAGCAGGAATTGTACACCTGGGGACGGTGGTGAGTCAGGAATGACAGGCAGG-TGGCCATGACCAGGGCAGCCTCCTCCCCAGGGCCAGTGACAGGGGAGTGGCCTGAGGAGCAGGACCCAAGGGTAGTCCAGGGCTGGGGAAGGGGGCAGAGACCTCCCCTTGGCCTAGGTCAAGAGCTCAGAAGTGCCACATGGCTGAGggggcagcggccctggaagggccagaggcagggccaggAGAGCACCATTTCCTGGGGGGCTGGGGGCACGGAGGCGTCCTACAGGAGAAGCCAGGAGGGGCTGCCTGCCCCTGGGGTGGGGGCCAGGCTGGAGG-----------------AGCAAGAAAGACCTAGGGCAGGTGCAGGGCCTGAGAGTCCAGCTGGCCGGGCTGGGGGTGCTCCCAGGGCAGCCTGGCCCAGGGAGCAGTCCTGACTCTGCAGGGGATGCTGAGCAAGAGGCCACAGACCCCTCAGGACCTCCCCTCCTCTCTCCCTAGAAAGGAGCTGGGGAACCTGTAGTGCAAATCTGTGGATCACTCAGTGATGGAGGGAGACTGTGCCCGAAGGTGGACACTGTGCCCGAAGGTGGA-CCCTTCCACCACCTCAGCTTCCACTGCTGTCCTCGGTATAGCCGCTTCTCGTAAGAGTGCAGGCCATGGACACCACCCTCAATCTGGACCGACATGGTCCGCTTCTCAAACTTGAGGTCTCCTGAGTACATCATGGATCGAAGGACAGACAGGCTGTGGGTCCCAATATCCTGGCAGCCATGCTGGATGCCCACTATGAGACAGGGCTCGAACTTCTGAATGGACCCTTTGTCCTTGATGGAGCCCAAGACACCCTGTGCGATCTTTACCTTATCCCCCTCGCTGAGGGGGGATTTCTGGCTGCTTCTGCTCTTCTCCATGGCATCCAGTGAGCCCATGCCCTGGTACTTCTTGAGCTGCACCCCGTCT---GAGAAGTACTCGCCAGGTGCCTCCACGGTGGTGGCCAGCAGGGAGCCCATCATCACTGTGGAGGCTCCAAGGGCCAGGGCTTTGACCACATGCCCCATGGTCAAG--------ATCGGCTATGATGGGCACATCAAAGCACTGGGCATACTCGGCCACCTTGTACACAGCAGTGCCCTGGGGCCAACTGCAGGCCTTCACTTCCTGGGTGATGCAGATGGAGCCGCAGCCCATGCCCAGGCACAGCCCATCCACACCAGCATCAATCAGGTTCTTGGCCTGGGCTGCTGTCACCACGTT-CCCCCTAATCACCTGGAAGTGGGGCTACTTCTGTTTGATGTAATGCACCATGGTGATCTGATACACTGGGTTCCCTTGGGACGAGTCCAAGACTATGACGTTGACACCCGCCTGGGTGAGCAGGTCCAGGCAGTATTTGTCATCCTCACGGGTGCCCACAGCTGCCCCCCACAGCAGCAGCTTGTGGCAATCCTTGGAGGTCAGAGGGTAGTCTCGATTCTTCTTCAGGTCGGTGTGGGCAATGATGGCCACCAGCTCATCACGATCACTGACAATAGGCAGCTTCCCTTTCTTGCTACACTGCAGGACCTCATTTGCCTCTTTCAACGTCATGCCTGCTGG----GGCCACCACCAGTTTCATCCTTGGCGTCATTATCTCACTGAGGAAGGTGGTGTGGTCCCTCTCAGCAAGATGTCCCTTGACATCTCGGGAGGTGACGATGCCCACCAGCTTGCTGCCCATGGTGCCCGTCTCAGTGAGGAGGATACCAGAGAAGCCATGCTGCATCTTGGCCTCC-AGCACATCACCCACGGTGTGCAAGGGGCTCAGCATCACGGGGTCTGTGATGAAGCCCTGTTCAAACTTCTTGACCTTCCGCACCTCGTTGGCCTGGAACTCTGGGGTGCAGTTGTGGTGAATGATACCAATACCTTCCATCAGAGCCATCCCGATTGCCATGTCAGCCTCTGTCAGTGTCCACAGGGAAGGAGATCAGCGGCGTCTTCAGCCCTTGCGGGTCAGGGCTGAGGTCAGGTCCACC---TCATCAGCTATGAAGTCTATGAATCCTAGGAGAATCAGGAAGTTGTTGTAGGT--GAGGCCGTTGGCGCTGGTGAAGAGCTGCTGCGCGGTGAGCCTGTCCTCGGGCACGTAGCCGGTGCCGCTGCTGATCAGGCAGTCTGCAAGGCTGCTGCGAGA-CCTGCAA-CGGACATAAACAACTGAGTGGCCACCTG-CACAGCCACACTGCCGCCACAGGCCAGGCAGCCCAGGCGGGCCAGGGGCAGGGGC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73219255 2394 - 125196307 ctatatatatgtatctatatatctatacatagatatagatatttggAGGTGTTGAAACCTACTTGATTTATTCTGATTATTTAATACACACTGATGTAACTGTGATCCCAAAGTGTGCAAAGTTAAA-GCCTTCAACTGCAGCTGAGG-AGAGGGCAGGAATTGTACACCTGGGGACGGTGGTGAGTCAGGAATGGCAGGCAGG-TGGCCATGACCAGGGCAGCCTCCTCCCCAGGGCCAGTGATAGGGGAGTGGCCTGAGGAGCAGGACCCAAGGGTAgcccagggctggggaagggTGCAGAGACCTCCCCTTGGCCTAGGTCAAGAGCTCAGAAGTGCCACATGGCTGAGGGGGCAGCGGCCCTGGAAGGGCCAGAGGCAGGGCCAGGAGAGCACCATTTCCTGGGGGGCTGAGGGCACGGAGGCATCCTACAGGAGAAGCCAGAAGGGTCTGCCTGCCCCTGGGGTGGGGGCCAGGCTGGAGG-----------------AGCAAGAAAGACCTAGGGCAGGTGCAGGGCCTGAGAGTCCAGCTGGCCGGGCTGGCGGCGCTCCCAGGGCAGCCTGGCCCAGGGAGCAGTCCTGACTCTGCAGGGGACGCCGAGCAAGAGGCCACAGACCCCTCAggacctcccctcctctctccctagAAAGGAGCTGGGGAACCTGTAGTGCAAATCTGTGGATCACTCAGTGATGGAGGGAGACTGTGCCCGAAGGTGGACACTG-------GGGTGCACCCCCTCCACCACCTCAGCTTCCACTGCTGTCCTCAGTATAGCCGCTTCTTGTAAGAGTGCAGGCCATGGACACCACCCTCAATCTGGACCGACATGGTCCGCTTCTCAAACTTGAGGTCTCCTGAGTACATCATGGATCGAAGGACAGACAGGCTGTGGGTCCCGATATCCTGGCAGCCATGCTGGATGCCCACTATGAGACAAGGCTTGAACTTCTGAATGGACCCTTTGTCCTTGATGGAGCCCAAGACACCCTGTGCGATCTTTACCTTATCCCCCTCGCTGAGGGGGGATTTCTGGCTGCTTCTGCTCTTCTCCATGGCATCCAGTGAGCCCATGCCCTGGTACTTCTTGAGCTGCACCCCGTCT---GAGAAGTACTCGCCAGGTGCCTCCACGGTGGTGGCCAGTAGGGAGCCCATCATCACTGTGGAGGCTCCAAGGGCCAGGGCTTTGACCACATGCCCCATGGTCAAG--------ATCAGCTATGATGGGCACATCAAAGCACTGGGCATACTCGGCCACCTTGTACACAGCAGTGCCCTGGGGCCAACTGCAGGCCATCACTTCCTGCGTGATGCAGATGGAGCCGCAGCCCATGCCCAGGCACAGCCCGTCCACACCAGCATCAATCAGGTTCTTGGCCTGGGCTGCTGTCACCACGTT-CCCCCTAATCACCTGAAAGTGGGGGTACTTCTGTTTGATGTAATGCACCATGGTGATCTGATACACTGAGTTCCCTTGGGACAAGTCCAAGGCTATGACGTTGACGCCCGCCTGGGTGAGCAGGTCCAGGCAGTATTTGTCATCCTCACgggtgcccacagctgccccccACAGCAGCAGCTTGTGGCAATCCTTGGAGGTCAGAGGGTAGTCTCGATTCTTCTTCAGGTCGGTGCGGGCAATGATGGCCACCAGCTCATCACGATCACTGACGATAGGCAGCTTCCCTTTCTTGCTACACTGCAGGACCTCATTTGCCTCTTTCAACGTCATGCCTGCTGG----AGCCACCACCAGTTTCATCCTTGGCGTCATTATCTCACTGAGGAAGGTGGTGTGGTCCCTCTCAGCAAGATGTCCCTTGACATCTCGGGAGGTAACGATGCCCAGCAGCTTGCTGCCCATGGTGCCCGTCTCAGTGAGGAGGATACCAAAGAAGCCATGCTGCATCTTGGCCTCC-AGCACATCACCCACGGTGTGCAA-GGGCTCAGCATCACGGGGTCTGTGATGAAGCCCTGTTCAAACTTTTTGACCTTCCGCACCTCGTTGGCCTGGAACTCTGGGGTGCAGTTGTGGTGAATGATACCAATATCTTCCATCAGAGCCATCCCGATTGCCATGTCAGCCTCTGTCAGTGTCCACAGGGAAGGAGATCAGCGGCGTCTTCAGCCCTTGCGGGTCAGGGCTGAGGTCAGGTCCACC---TCATCAGCTATGAAGTCTATGAATCCTAGGAGAATCAGGAAGTCGTTGTAGGT--GAGGCCGTTGGCGCTGGTGAAGAGCTGCTGCGTGGTGAGCCTGTCCTCGGGCACGTAGCCGGTGCCGCTGCTGATCAGGCAGTCTGCAAGGCTGCTGCGAGA-CCCGCAA-TGGACATAAACAACCGAGTggccacctg-cacagccacactgccgccacaggccaggcaggccaggcgggccaggggcaggggc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72051324 2395 - 125710982 ctatatatatgtatctatatatctatacatagatatagatatTTGGAGGCGTTGAAACCTACTTGATTTATTCTGATTATTTAATACACACTGATGTAACTGTGATCCCAAAGTGTGCAAAGTTAAA-GCCTTCAACTGCAGCTGAGG-AGAGAGCAGGAAATGTACACCTGGGGACGGTGGTGAGTCAGGAATGACAGGCAGG-TGGCCATGACCAGGGCAGCCTCCTCCCCAGGGCCAGTGACAGGGGAGTGGCCTGAGGAGCAGGACCCAAGGGTAGCCCAGGGCTGGGGAAGGGGGCAGAGACCTCCCCTTGGCCTAGGTCAAGAGCTCAGAAGTGCCACATGGCTGAGggggcagcggccctggaagggccagaggcagggccaggAGAGCACCATTTCCTGGGGGGCTGGGGGCACGGAGGTGTCCTACAGGAGAAGCCAGGAGGGGCTGCCTACCCCTGGGGTGGGGGCCAGGCTGGAGG-----------------AGCAAGAAAGACCTGGGGCAGGTGCAGGGCCTGAGAGTCCAGCTGGCCAGGCTGGGGGCGCTCCCAGGGCAGCCTGGCCCAGGGAGCAGTCCTGACTCTGCAGGGGATGCTGAGCAAGAGGCCACAGACCCCTCAGGACCTCCCCTCCTCTCTCCCTAGAAAGGAGCTGGGGAACCTGTAGTGCAAATCTGTGGATCACTCAGTGATGGAGGGAGACTGTGCCCGAAGGTGGACACTG-------GGGTGCACCCCCTCCACCACCTCAGCTTCCACTGCTGTCCTCAGTATAGCTGCTTCTCGTAAGAGTGCAGGCCATGGACACCACCCTCAGTCTGGACCGACATGGTCCGCTTCTCAAACTTGAGGTCTCCTGAGTACATCATGGACCGAAGGACAGACAGGCTGTGGGTCCCGATATCCTGGCAGCCATGCTGGATGCCCACTATGAGACAGGGCTCGAACTTCTGAATGGACCCTTTGTCCTTGATGGAGCCCAAGACACCCTGTGCGATCTTTACCTTATCCCCCTCGCTGAGGGGGGATTTCTGGCTGCTGCTGCTCTTCTCCATGGCATCCAGTGAGCCCATGCCCTGGTACTTCTTGAGCTGCACCCCGTCT---GAGGAGTACTCGCCAGGTGCCTCCACGGTGGTGGCCAGCAGGGAGCCCATCATCACTGTGGAGGCTCCAAGGGCCAGGGCTTTGACCACATACCCCATGGTCAAG--------ATCGGCTATGATAGGCACATCAAAGCACTGGGCATACTCGGCCACCTTGTACAGAGCAGTGCCCTGGGGCCAACTGCAGGCCATCACTTCCTGGGTGATGCAGATGGagccgcagcccatgcccaggcacagcccgtccacaccagcATCAATCAGGTTCTTGGCCTGGGCTGCTGTCACCACGTT-CCCCCTAATCACCTGGAAGTGGGGCTACTTCTGTTTGATGTAATGCACCATGGTGATCTGATACACTGAGTTCCCTTGGGACGAGTCCAAGACTATGACGTTGACGCCTGCCTGGGTGAGCAGGTCCAGGCAGTATTTGTCATCCTCACGGGTGCCCACAGCTGCCCCCCACAGCAGCAGCTTGTGGCAATCCTTGGAGGTCAGAGGGTAGTCTCGATTCTTCTTCAGGTCGGTGCGGGCAATGATGGCCACCAGCTCACCATGATCACTGACGATAGGCAGCTTTCCTTTCTTGCTACGCTGCAGGACCTCATTTGCCTCTTTCAATGTCATGCCTGCTGG----AGCCACCACCAGTTTCATCCTTGGCATCATTACCTCACTGAGGAAGGTGGTTTGGTCCCTCTCAGCAAGATGTCCCTCGACATCTTGGGAGGTGACGATGCCCACCAGCTTGCTGCCCACGGTGCCCGTCTCAGTGAGGAGGATACCAGAGAAGCCATGCTGCATCTTGGCCTCC-AGCACATCACCCACGGTGTGCAAGGGGCTCAGCATCACGGGGTCTGTGATGAAGCCCTGTTCAAACTTCTTGACCTTCCGCACCTCGTTGCCCTGGAACTCTGGGGTGCAGTTGTGGTGAATGATACCAATACCTTCCATCAGAGCCATCCCGATTGCCATGTCAGCCTCTGTCAGTGTCCACAGGGAAGGAGATCAGCGGCGTCTTCAGCCCTTGCGGGTCAGGGCTGAGGTCAGGTCCACT---TCATCAGCTATGAAGTCTATGAATCCTAGGAGAATCAGGAAGTCGTTGTAGGT--GAGGCCGTTGGTGCTGGTGAAGAGCTGCTGCACGGTGAGCCTGTCCTCGGGCACGTAGCCGGTGCCACTGCTGATCAGGCAGTCTGCAAGGCTGCTGCGAGA-CCCGCAA-CGGACATAAACACCTGAGTGGCCACCTG-CACAGCCACACTGCCGCCAcaggccaggcaggccaggcgggccgggggcaggggc i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27679950 21 + 88276631 I e mm10.chr14 24093499 39790 + 124902244 I e calJac3.chr12 75512309 0 - 121768101 C a score=12466.000000 s hg38.chr10_KI270825v1_alt 20655 7 + 188315 TCTCA-GT s panTro4.chr10 76391283 2 + 133524379 ------GT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76059064 7 - 133410057 TCTCA-GT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35001444 7 + 104879549 TCTCA-GT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73795139 8 - 130959383 TCTCATGT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75357278 8 - 133195287 TCTCATGT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73221649 8 - 125196307 tctcatgt i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72053719 8 - 125710982 TCTCATGT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75512309 7 - 121768101 TCTCA-GT i calJac3.chr12 C 0 C 0 e canFam3.chr4 27679950 21 + 88276631 I e mm10.chr14 24093499 39790 + 124902244 I a score=8071570.000000 s hg38.chr10_KI270825v1_alt 20662 2598 + 188315 GTAAATCTTTTTATATCCCTTCTACTTTTGGG---AAAAAAAAAT--------GCCCCAGGAAGGTCTGATCACCAAATCCTTCCAGAGA--------GCGATCTTCCAAGCCAAAGAG--GTTTTCAGTCCCACCCACTGAAATCATCCAGTCCTTTATTCACCTGTGTCAACCCGGCTCGGA---GGTGTGGCCTGCGAGATCCTTCATGCAATCAAGAAGTCAGGCCTCCACCTGGTCCT-GGGGGTCATCTGAGGCCCGCAGTTTTGGAA-------GAGGAATGTTTTCTGCCAGCAGTTCCCACAGACGGGCTGGCTCCCCACTGTG--GGGACATGCACCATGCCCTCTGTGGGC-CTCT-GTTTTTCATCCCTGAATTCATCCCCCACAGAATGGTTCAGTTGTCATATCTAGCTAT-CTAATAAGCTTGAGGGCAC--TGTGTCCCCTAGGGGAT---------------GCCCACATGCCTGACCATGCAGGCTGATGCAGTGACAAGCAC--AAAGTATCGTGATTATAGTTCCTGCTCTCCTTTCCAGGGCTTTAAGCCCAGCACATGATGTTGTGCGTTTCTTGTTCCACCAACTGGCTGCTGTGGAATGACTACGAAACATCTTGGATGACAGTTTAATCCTCGTGGGGTACCA-GGTGGCATCTGGGCACAGGTCAAACTTTCCGAGAGCCTTTTTAACCTCTTTCACTGCAGCCAGGAATGGCTGGATCT---CTGCTGCTGCCTATAGGGATTACAGTTGTCCCATCCATACACTGGTCT---------------GTGTTGGCTTTTGTCACCTGGGCATGTGCGGCCACCATCTTGACTGCTCAGCTAGTTCTGTACCTGGGTTCTAGAATGATGTCATAATGATGCC-ATTATGACAGATCAGCCCAAGGCTGCACACTGACCTAATC----AACAGGTGCGGCAGAGCT----GTGATTAAGAGACTGAGTCAG----TTCCCACTTGTGAATAGACAGCATGAAGGCTTTAAACCTCTCTGAACCTGATCAGCATT------GGCAATGA--TCTTCTGCAGATCCAACAACAGCACAGAAGAATGTATCATCAGGAACACATTTGGATATTGACACAACTTCATCTGCAGTTGGCTTGTCATCCTGAGCTCCGTTCCCAGGCAGCGTAGATATTGCACAGGATTTTGCTGACCAGGGAGTTGGGTTATAAGTGGTAACTC-CAACCTC---TTAATACTAACGACATTGACAGTACCATATAATCCATCTATTACACCACACAGGAAA-------ATCAAGCCCAGTGGTACAGGACAGAAGAACTGGCTCCAGCCAGGATCAAGCATTGCTTTGGCA-----------------TTGTTCCCCAATACCTGGGCCTTTCTTCTCCAA----TTGTTGGGGTAACTGGAGTGAGGAGCCTG-AGGGGACCCAAAGGTGTTCTCCTGGTAGGATTCCCTCTCATGGTCTTCTGCATTTGTAGACATTTT-GATTGGTTCCATTTC--------TAAGGGCCAATTATCTGTGCTTTAACCTGAAATAAGGAACCTGCCTTCTGATCTTCAAGGATATGTACATGGACACACATCTTTCAGATTCAACTCTTGAGATTTTTGGTTTTAAACAAACAATTGTGTTCATCACAAATGAAGATTCCCTCAAGCAGCAGCCTCCTGG--AATCAACTGCTGAGTCCAAATCTTGTAGCCCTTAAAAATATTTAG-TATTTTTACTAAGTAATAAGTATTTAGGGTGTTATGAAAAATGCAATTTGAAAAAGTACATTGGTTTTTAAGAACAAGAGGAACTATTTAGAAATTATACAATATATTAACAAAAGTAAATATTTAATATATCTCAAACACAAAAATGCAAAAACTGGTTACCAAGCATCAAGAAAAACTTAAAACTTGTAAAATACAAAGGTTAAATGTATTTTATCTTCATTCTATTATTAGCAGATAACCTTAA----------------TAAAAATGAG-CTGTTATTTACAGCAAAATATCATGTAATTTTAGATTTATCA--CTTTTTATTTCTATGGAAAAGCAACACCAGCATGTATTGTTGCTGAAGGTGAAGCAACTTTTTGATTCTGTTCTGTTCCACTCTGTGTTCTAAGATGTGTGTCAGATACCGGCCACACACCCTACATGTGCTCGGGGCACAGCCTGGCCCCACACAGCACTCTAGTCTGCAGGTGGGCATCTAAGGCCCTGCCATTCCCACTTCTTATTGTCATATTTACTTAGTTCTCAGCACCTCTGCCCATCTTTAAATGACTT--AAGTGAGAGTATGTTAAAGTAGCTTACATGTTCCTAAGCTTCCTCACAGCACATCCCATCTGT-----------GACAGCAATTCAG-AA-AAAAACAAATTTTCTTTTATTCTTAATGGTACACAGCATAAGAGAACAGCTCAGGCAGTTTACTGTAA--TTGACGGTCCTGATATCCTTATCTATAAACTAAAAACTCCCCACAGAAGCT-------TCTGTAAGTATA---ATGTTAAATAAGTCTATAAACACAAATAACAGTAAC---AACAA-GAATGTAATCCAAATGCTCAGTTATGGGAAACTAGTGAAGAAATTTACTGGTAAAC-CCACtgtga------tgatg------tgtgtgtatgtgtgtgtgtgtgtgCAtgtcaagttggctcagtgacagtccctagttatgtaagctaggtgct-gctgtgaaggtattttgca s panTro4.chr10 76391285 2591 + 133524379 GTAAATCTTTTTATATCCCTTCTACTTTTGGG---AAAAAAAAAT--------GCCCCAGGAAGGTCTGATCACCAAATCCTTCCAGAGA--------GCGATCTTCCAAGCCAAAGAG--GTTTTCAGTCCCACCCACTGAAATCATCCAGTCCTTTATTCACCTGTGTCAACCCGGCTCGGA---GGTGTGGCCTGCGAGATCCTTCATGCAATCAAGAAGTCAGGCCTCCACCTGGTCCT-GGGGGTCATCTGAGGCCCGCAGTTTTGGAA-------GAGGAATGTTTTCTGCCAGCAGTTCTCACAGACGGGCTGGCTCCCCACTGTG--GGGACATGCACCATGCCCCCTGTGGGC-CTCT-GTTTTTCATCCCTGAATTCATCCCCCACAGAATGGTTCAGTTGTCATGTCTAGCTAT-CTAATAAGCTTGAGGGCAC--TGTGTCCCCTAGGGGAT---------------GCCCACATGCCTGACCATGCAGGCTGATGCAGTGACAAGCAC--AAAGTATCGTGATTATAGTTCCTGCTCTCCTTTCCAGGGCTTTGAGCCCAGCACATGATGTTGTGCGTTTCTTGTTCCACCAACTGGCTGCTGTGGAATGACTAGGAAACCTCTTGGATGACAGTTTAATCCTTGTGGGGTACCA-GGTGGCATCTGGGCACAGGTCAAACTTTCCGAGAGCCTTTTTAACCTCTTTCACTGCAGCCAGGAATGGCTGGATCT---CTGCTGCTGCCTATAGGGATTACAATTGTCCCATCCATACACTGGTCT---------------GTGTTGGCTTTTGTCATCTGGGCATGTGCGGCCACCATCTTGACTGCTCAGCTAGTTCTGTACCTGGGTTCTAGAATGATGTCATAATGATGCC-ATTATGACAGATTAGCCCAAGGCTGCACACTGACCTAATC----AACAGGTGCGGCAGAGCT----GTGATTAAGAGACTGAGTCAG----TTCCCACTTGTGAATAGACAGCATGAAGGCTTTAAACCTCTCTGAACCTGATCAGCATT------GGCAATGA--TCTTCTGCAGATCCAACAACAGCACAGAAGAACGTATCATCAGGAACACATTTGGATATTGACACAACTTCATCTGCAGTTGGCTTGTCATCCTGAGCTCCGTTCCCAGGCAGCGTAGATATTGCACAGGATTTTGCTGACCAGGGAGTTGGGTTATAAGTTGTAACTC-TAACCTC---TTAATACCAACGACATTGACAGTACCATAAAATCCATCTATTACACCACACAGGAAA-------ATCAAGCCCAGTGGTACAGGGCAGAAGAACTGGCTCCAGCCAGGATCAAGCATTGCTTTGGCA-----------------TTGTTCCCCAATACCTGGGCCTTTCTTCTCCAA----TTGTTGGGGTAACTGGAGTGAGGAGCCTG-AGGGGACCCAAAGATGTTCTCCTGGTAGGATTCCCTCTCATGGTCTTCTGCATTTGTAGACATTTT-GATTGGTTCCATTTC--------TAAGGGCCAATTATCTGTGCTTTAACCTGAAATAAGGAACCTGCCTTCTGATCTTCAAGGATATGTACATGGACACACATCTTTCAGATTCAACTCTTGAGATTTTTGGTTTTAAACAAACAATTGTGTTCATCACAAATGAAGATTCCCTCAAGCAGCAGCCTCCTGG--AATCAACTGCTGAGTCCAAATCTTGTAGCCCTTAAAAATATTTAG-TATTTTTACTAAGTAATAAGTATTTAGGGTGTTATGAAAAATGCAATTTGAAAAAGTACATTGGTTTTTAAGAACAAGAGGAACTATTTAGAAATTATACAATATATTAACAAAAGTAAATATTTA-----TCTCAAACACAAAAATGCAAAAACTGGTTACCAAGCATCAAGAAAAACTTAAAACTTGTAAAATACAAAGGTTAAATGTATTTTATCTTCATTCTATTATTAGCAGATAACCTTAA----------------TAAAAATGAG-CTGTTATTTACAGCAAAATATCATGTAATTTTAGATTTATCA--CTTTTTATTTCTATGGAAAAGCAACACCAGCATGTATTGTTGCTGAAGGTGAAGCAACTTTTTGATTCTGTTCTGTTCCACTCTGTGTTCTAAGATGTGTGTCAGATACCGGCCACACACCCTACATGTGCTCGGGGCACAGCCTGGCCCCACACAGCACTCTAGTCTGCAGGTGGGCACCTAAGGCCCTGCCATTCCCACTTCTTATTGTCATATTTACTTAGTTCTCAGCACCTCTGCCCATCTTTAAATGACTT--AAGTGAGAGAACGTTAAAGTAGCTTACATGTTCCTAAGCTTCCTCACAGCACATCCCATCTGT-----------GACAGCAATTCAG-AA-AAAAACAAATTTTCTTTTATTCTTAATGGTACACAGCATAAGAGAACAGCTCAGGCAGTTTACTGTAA--TTGACGGTCCTGATGTCCTTATCTATAAACTAAAAACTCCCCACAGAAGCT-------TCTGTAAGTATA---ATGTTAAATAAGTCTATAAACACAAATAACAGTAAC---AACAA-GAATGTAATCCAAATGCCCAGTTATGGGAAACTAGTGAAGAAATTTACTGGTAAAC-CCACTGTGA------TGAtg------tgtgtgtatgtgtgtgtgtgtA--CAtgtcaagttggctcagtgacagtccctagttatgtaagctaggtgct-gctgtgaaggtattttgca i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76059071 2514 - 133410057 GTAAATGTTTTTATATCCCCTCTACTTTTGGG--AAAAAAAAAAT--------GCCCCAGGAAGGTCTGAACACCAAATCCTTCCAGAGA--------GCGGTCTTCCAAGCCAAAGAG--GTTTTCAGTCCCACCCACTGAAATCATCCAGTCCTTTATTCACCTGTGTCAACCAGGCTCGGA---GGTGTGGCCTGCGAGATCCTTCATGCAATCAAGAAGTCAGGTCTCCACCTGGTCCT-GGGGGTCATCTGAGGCCCGCAGTTTTGGAA-------GAGGAATGTTTTCTGCCAGCAGTTCCCACAGATGGGCTGGCTCCCCACTGTG--GGGACATGTACCATGCCCCCTGTGGGC-CTCT-GTTTTTCATCCCTGAATTCATCCCCCACAAAATGGTTCAGTTGTCATATCTAGCTAT-CTAATAAGCTTGAGGGCAC--TGTGTCCCCTAGGGGAT---------------GCCCACATGCTTGACCATGCAGGCTGGTGCAGTGACAAGCAC--AAAGTATCGTGATTATAGTTCCTGCTCTCCTTTCCAGGGCTTGGAGCCCAGCACATGATGTTGTGCATTTCTTGTTCCACCAACTGGCTGCTGTGGAATGACTAGGAAACCTCTTGGATGAGAGTTGAATCCTCGTAGGGTACCA-GGTGGCATCTGGGCACAGGTCAAACTTTCCAAGAGCCTTTTTAATCTCTTTCACTGCAGCCAGGAATGGCTGGATCT---CTGCTGCTGCCTATAGGGATTACAATTGTCCCATCCATACACTGGTCT---------------GTGTTGGCTTTTGTCACCTGGGCATGTGCGGCCACCATCTTGACTGCTCAGCTAGTTCTGTCCCTGGGTTCTAGAATGATGTTATAATGATGCC-A------------------------------------------------------------------------------------------TTCCCACTTGTGAATAGACAGCATGAAGGCTTTAAAC--CTCTGAACCTGATCAGCACT------GGCAATGA--TCTTCTGCAGATCCAACAACAGCACAGAAGAACGTATCATCAGGAACACATTTGGATATTGACACAACTTCATCCGCAGTTGGCTTGTCATCCCGAGCTCCCTTCCCAGGCAGCGTAGATATTGCACAGGATTTTGCTGACCAGGGAGCTGGGTTATAAGCGGTAACTC-TAACCTC---TTAATACTAGCAACATTGACAGTACCATATAATCCATCTATTACACCACACAGGAAA-------ATCAAGCCCAGTGGTACAGGACAGAAGAACTGGCTCCAGCCAGGATCAAGCATTGCTTTGGCA-----------------TTGTTCCCCAATACCTGCGACTTTCTTCTCCAG----TTGTTGGGGTAACTGGAGTGAGGAGCCTG-AGGGGACCCAAAGATGTTCTCCTGGTAGGATTCCCTCTCATGGTCTTCTGCATTTGTAGACATTTT-GATTGGTTCCATTTC--------TAAGGACCAATTATCTATGCTTTAACCTGAAATAAGGAACCTGCCTTCTGATCTTCAAGGATATGTACATGGACACACATCTTTCAGATTCATCTCTTGAGATTTTTGGTTTTAAACAAACAATTGTGTTCATCACAAATGAAGATTCCCTCAAGCAGCAGCCCCCTGG--AATCACCTGCTGAGTCCAAATCTTGCAGCCCTTAAAAATACTTAC-TATTTTTACTAAGTAATAAGTATTTAGGGTGTTATGAAAAATGCAATTTGAAAAAGTACATTGGTTTTTAAGAACAAGAGGaattatttagaaattatacaatatattaagaaaagtaaatatttaatatatCTCAAACACAAAAATGCAAAAACTGGTTACCAAACATCAAGAAAAACTT-AAACTTGTAAAATACAAAGGTTAAATGTATTTTATCTTCATTCTATTATTAGCAGATAACCTTAA----------------TAAAAATGAG-CTGTTATTTACAGCAAAATATCATGTAATTTTAGATTTATCA--CTTTTTATTTCTATGGAAAAGCAACACCAGCATGTATTGTTGCTGAAGGTGAAGCAGCTTTTTGATTCTGTTCTGCTCCACTCTGTGTTCT---ACATGTGTCAGATACCGGCCACACACCCTACATGTGCTCGGGGCACAGCCTGGCCCCACACAGCACTCTAGTCTGCAGGTGGGCACCTAAGGCCCTGCCATTCCCACTTCTTATTGTCATATTTACTTAGTTCTCAGCACCTCTGCCCATCTTTAAATGACTT--AAGTGAGAGTACATTAAAGTAGCTTAGATGTTCCTAAGCTTCCTCAGAGCACACCACATCTGT-----------GACAGCAATTCAGAAA-AAAAACAAATTTTCTTTTATTCTTAATGGTACACAGCATAAGAGAACAGCTTAGGCAGTTTACTGTAA--CTGACAGTCCTGATGTCCTTATCTATAAACTAAAAACTCCCCACAGAAGCT-------TCTGTAAGTATA---ATGTTAAGTAAGTCTATGAACACAAATAACAGTAAC---AACAA-GAATGTAATCAAAATGCCCAGTTATGGGAAACTAGTGAAGAAATTTACTGGTAAAC-CCACTGTGA------TGAtg------tgtgtgtatgtgtgtgtgtgtA--CAtgtcaagttggctcagtgacagtccctagttatttaagctaggtgct-gctgtgaaggtattttgca i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35001451 2592 + 104879549 GTAAATGTTTTTATATCCCTTCTACTTTTGGA-AAAAAAAAAAAT--------GCCCCTGGAAGGTCTGATCACCAAATCCTTCCAGAGA--------GCGGTCTTCCAAGCCAAGGAG--GTATTCAGTCCCACCCACTGAAATCATCCAGTCCTTTATTCACCTGTGTCAATCCGCCTCGGA---GGTGAGGCCTGCAAGATCCTTCATGCAATCAAGAAGTCAGGCCTCCACCTGGTCCT-GGGGGTCATCTGAGGCCCGCAGTTTTGGAA-------GAGGAGTGTTTTCTGCCAGCAGTCCCCACAGATGGGCTGGCTTCCCACTGTG--GGGACATGCACCATGCCCACTGTGGGC-CTCT-GTTTTTCATCCCTGAATTCATCCCCCACAGAATGGTT--GTTGTCGTATCTAGCTAT-CTAATAAGCTTGAGGGCAC--TGTGTCCCCTAGGGGAT---------------GCCCACATGCTTGACCATGCAGGCTGATGCAGTGACAAGCACAAAAAGTATCGCGATTATAGTTCCTGCTCTCCTTTCCAGGGCTTTGAGCCCAGCACATGATGTTGTGCATTTCTTGTTCCACCAACTGGCGGCTGCGGAATGACTAGGAAACCTCTTGGATGAGAGTTTAATCCTCGTGGGGTACCACGAGGGCATCTGGGCACAGGTCAAACTTTCCAAGGGCCTTTTTAACCTCTTTCACTGAAGCCAGGAATGGCTAGATCT---CTGCTGCTGCCTACAGGGATTACAATTGTCCCATCCATACACTGGTCT---------------GTGTTGGCTTTTGTCACCTGGGCATGTGCGGCCACCATCTTGACTGCTCAGCTAGTTTTGTCCCTGGGCTCTAGAATGATGTCATAATGATGCC-ATTATGACAGATCAGCCCAAGGCTGCACACTGACCTAATC----AACAGGTGCGGCAGAGCT----GTGATTAAGAGACTGAGTCAA----TTCCCACTTGTGAATAGACAGCATGAAGGCTTTAAATCTCTCGGAACCTGATCAGCATT------GGCAATGA--TCTTCTGCAGATCCCACAACAGCACAGAAGAATGTATCATCAGGAACACATTTGGATATTGATACAACTTCATCCGCAGTTGGCTTGTCATCCCGAGCTCCCTTCCCAGGCAGCGTAGATATTGCACAGGATTTTGCTGACCCGGGAGTTGGGTTATTAGTGGTAACTC-TAACCTC---TTAATACTAGCAACATTGACAGCACCATATAATCCATCTATTACACCACACAGGAAA-------ATCAAGCCCAGTGGTACAGGACAGAAGAACTGACTCCAGCCAGGATCAAGCATTGCTTTGGCA-----------------TTGTTCCCCAATACCTGGGCCTTTCTTCTCCAA----TTGTTGGGGTAACTGGAGTGAGGAGCCTG-AGGGGACCCAAAGATGTTCTCCTGGTAGGATTCCCTCTCATGGTCTTCTGCATTTGTAGACATTTT-GATTGGTTCCATTTC--------TAAGGGCCAATTATCTGTGCTTTAACCTGAAATAAGGAACCTGCCTTCTGATTTTCAAGAATATGTACATGGACACACATCTTTCAGATTCGACTCTTGAGATTTTTGGTTTTAAACAAACAATTGTGTTCATCACAAATGAAGATTCCCTCAAGCAGCAGCCTCCTGG--AATCACCTGCTGAGTCCAAATCTTGTAGCCCTTAAAAATACTTAG-TATTTTTACTAAGTAATAAGTATTTAGGGTGTTATGAAAAATGCAATTTGAAAAAGTACATTGGTTTTTAAGAACAAGAGGAACTATTTAGAAATTATACAATATATTAACAAAAGTAAATATTTAATATATCTCCAACACAAAAATGCAAAAACTGGTTACCAAACATCAAGAAAAACTT-AAACTTGTAAAATACAAAGGTTAAATGTATTTTATCTTCATTCTATTATTAGCAGATAACCTTAA----------------TAAAAATGAG-CTGTTATTTACAGCAAAATATCATGTAATTTTAGATTTATCA--CTTTTTATTTCTACGAAAAAGCAACACCGGCATGTATTGTTGCTGAAGGTGAAGCAGCTTTTTGTTTCTGTTCTGTTCCACTCTGTGTTCTAAGATGTGTGTCAGATACCGGCCACACACCCTACATGTGCTCTGGGCACAGCTTGGCCCCACACGGCACTCTAGTCTGCAAGTGGGCACCTAAGGCCCTGCCATTCCCACTTCTTATTGTCATATTTACTTAGTTCTCAGCACCTCTGCCCATCTTTAAATGACTT--AAGTGACAGTACATTAAAGTAGCTTAGATGTTCCTAAGCTTCCTTAGAGCACATCACATTTGT-----------GACAGCAATTCAG-AA-AAAAACAAATTTTCTTTTATTCTTAACGGTACACAGCATAAGCAAACAGCTTAGGCAGTTTACTGTAA--CTGACGGTCCTGATATCCTTATCTATAAACTAAAAACTCCCCACAGAAGCT-------TCTGTAAGTATA---ATGTTAAATAAGTCTATAAACACAAATAACAGT------AACAA-GAATGTAATCCAAATGCCCAGTTATGGGAAACTAGTGAAGAAATTTACTGGTAAAC-CCACtg---------tgata------tgtgtgtatgtgtgtgtgtgta--catgtcaagctggctcagtgacagtccctagttatttaagctaggtgct-gctgtgaaggtattttgca i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73795147 2544 - 130959383 ATATAT-TTTTTATATCCCTTCTATTTTTGGG---AAAAAAAAAT--------GCCCCAGGAAGGTCTGATCACCAAATCCTTCCAGAGA--------GTGGTCTTTCAAGCCAAGGCG--GTTTTCAGTCCCACCCACTGAAATCATCCAGTCCTTCATTCACCTATGTCGACCCAGCTCGGA---GGTGTGACCTGCGAGATCCTTCATGCAATCAAGAAGTCAGGCCTCCACCTGGTCCT-GGGGGTCATCTGAGGCCCGCAGTTTTGGAA-------GAGGAA------------------------------CTGGCTCCCCACTGTG--GGGACATGTACCATGCCCACTGTGGGC---CT-GTTTTTCATCCCTGAATTCACCCCCCACAGAATGGTTCAGTTGTCATATCTAGCTAT-CTAATAAGCTTGAGGGCAC--TGTGTCCCCTGCGGGATGTCCCCA-TGTCAGAGCCCACATGCTTGACCATGCAGGCTGATGCAGTGACAAGCAC--GAAATATCGTGATTATAGTTCCTGCTCTCCTTTCCAGGGCTTTGAGCCCAGCACATGATGTTGTGTGTTTCTTGTTCCACCAACTGGCTGCTGTGGAATGACTAGGAAACCTCTTGGATGAG------------------------GGTGGCATCTGGGCACAGGTCAAACTTTCTGAGAGTCTTTTTAACCTCTTTCGCTGCAGCCAGGAATGGCTGGATCT---CTGCTGCTGCTTGCAGGGA------CTGTCCCATCCATACACGGGTCT---------------GTGCTGGCTTTTGTCACCTGGGCATGTACGGCCACCATCTTGCCTGCTCAGCTAGTTCCATCCCTGGGTTCTAGAATGATGTCATAATGATGCCCATTATGACAGATCAGCCCAAGGCCGCACGCTGACCTAATCAATAAACAGGTGGGGCAGAGCT----GTGATTAAGAAACTGAGTCAGTCAATTCCCACTTGTGAATAGACAGCATGAAGGCTTTAAACCTCTCTGAACCTGATCAGCATT------GGCAATGA--CCTTCTGCAGATCCAACAACAGCACAGAAGAACGTATCATCAGGAATACATTTGGATATTGACACAACTTCATCCGCAGTCGGCTTGTCATCCTGAGCTCCCTTCCCAGGCAGCGTGGATATTGCACTGGATTTTGCTGACCAGGGAGTTGGGTTATAAGCGGTAACTC-TAACCTC---TTAATACTAGCAACATTGACAGTACCATATAATCCATCTATTACACCACACAGGAAA-------ATCAAGCCCAGCAGTACAGGACAGAAGAACTGACTCCAGCCAGGATCAAGCATTGCTTTGGCA-----------------TTGTTCTCCAATACCTGGGCCTTTCTTCTCCAA----TTGTTGGGGTAACCGGAGTGAGGAGCCTG-AGGGGACCCAAAGATGTTCTCCTGGTAGGATTCCCCGCCATGGTCTTCTGCATTTGTAGACATTTT-GATTGGTTCCATTTC--------TAAGAGCCAATTATCTGTGCTTTAACGTGAAATAAGGAACCTGCCTTCTGATCTTCAAGAATATGTACATGGACACACACCTTTCAGATTCAACTC-TGAGATTTTTGGTTTTAAACAAACAATTGTGTTCATCACAAATGAAGAGTCCCTCAAGCAGCAGCCTCCTGG--AATCACCTGCTGAGTCCAAATCTTGTAGCCCTTAAAAATAC-----TATTTTTACAAAGTAATAAGTATTTAGGGTGCTATGAAAAATGCAATTCGAAAAAGTACATTGGTTTTTAAGAACAAGAGGAACTATTTAGAAATTATACAATATATTAACAAAAGTAAATATTTAATATATCTCAAACACAAAAATGTAAAAACCGGTTACCAAACATCAAGAAAAACTT-AAACTTGTAAAATGCA---TTTAAATGTATTTTATCTTCATTCTATTATTAGCAGATAATCTTAA----------------TAAAAATGAG-CTGTTATTTAAAGCAAAATATCATGTAATTTTAGATTTATCA--CTTTCTATTTCTATGGAAAAGCAACACCAGCATGCATTGTTGCTGAAAGTGAAACAGTTTTCTGATTCTGTTCTGTTCCACTCTGTGTTCTGAGATGTGTATCAGACACCAGCCACACACCCTAGATGTGCTCGGGGCACAGCCTGGCCCCACACAGCACTCTAGTCTGCAGGTGGGCACCTAAGGCCCTATCATTCCCACTTCTTATTGTCATATTTACTTATTTATCAGCACCTCTATCCATCTTTAAATGACTT--AAGTGAGAGTACATTAAAGTAGCTTAGATGTTCCTAAGCTTCCGCAGAGCACGTCGCATCTGT-----------GACAGCAATTCAGAAA-AAGAACAAATTTTATTTTATTCTTAATAGTACACAGCATAAGAGAACAGCTTAGGCAGTTTACTGTAA--CTGATGGTCCTGATGTCCTTATCTATAAACTAAAAACTCCCCACAGAAGCT-------TCTGTAAGTATA---ATGTTAAATAAGTCTGTAAACACAAAT------------AACAA-GAATGCAATCCAAGTGCTCAGTTATGGGAAACTGGTGAAGAAAGTTACTGGTAAAC-CCACtgtgatg----tgatg----tgtgtgtgtgtgtgtgtgtgtgta--cgtgtcagcttggctcagtgacagtccttagttatttaagctaggtgct-gctgtgaaggtattttgca i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75357286 2549 - 133195287 ATATAT-TTTTTATATCCCTTCTATTTTTGGG---AAAAAAAAAT--------GCCCCAGGAAGGTCTGATCACCAAATCCTTCCAGAGA--------GTGGTCTTTCAAGCCAAGGCA--GTTTTCAGTCCCACCCACTGAAATCATCCAGTCCTTCATTCACCTATGTCGACCCAGCTCAGA---GGTGTGACCTGCGAGATCCTTCATGCAATCAAGAAGTCAGGCCTCCACCTGGTCCT-GGGGGTCATCTGAGGCCCGCAGTTTTGGAA-------GAGGAA------------------------------CTGGCTCCCCACTGTG--GGGACATGTACCATGCCCACTGTGGGC---CT-GTTTTTCATCCCTGAATTCACCCCCCACAGAATGGTTCAGTTGTCATATCTAGCTAT-CTAATAAGCTTGAGGGCAC--TGTGTCCCCTGCGGGATGTCCCCA-TGTCAGAGCCCACATGCTTGACCATGCAGGCTGATGCAGTGACAAGCAC--GAAATATCGTGATTATAGTTCCTGCTCTCCTTTCCAGGGCTTTGAGCCCAGCACATGATGTTGTGTGTTTCTTGTTCCACCAACTGGCTGCTGTGGAATGACTAGGAAACCTCTTGGATGAG------------------------GGTGGCATCTGGGCACAGGTCAAACTTTCTGAGAGTCTTTTTAACCTCTTTCGCTGCAGCCAGGAATGGCTGGATCT---CTGCTGCTGCTTGCAGGGA------CTGTCCCATCCATACACGGGTCT---------------GTGCTGGCTTTTGTCACCTGGGCATGTACGGCCACCATCTTGCCTGCTCAGCTAGTTCCATCCCTGGGTTCTAGAATGATGTCATAATGATGCCCATTATGACAGATCAGCCCAAGGCCGCACGCTGACCTAATCAATAAACAGGTGGGGCAGAGCT----GTGATTAAGAAACTGAGTCAGTCAATTCCCACTTGTGAATAGACAGCATGAAGGCTTTAAACCTCTCTGAACCTGATCAGCATT------GGCAATGA--CCTTCTGCAGATCCAACAACAGCACAGAAGAACGTATCATCAGGAATACATTTGGATATTGACACAACTTCATCCGCAGTCGGCTTGTCATCCTGAGCTCCCTTCCCAGGCAGCGTGGATATTGCACTGGATTTTGCTGACCAGGGAGTTGGGTTATAAGCGGTAACTC-TAAACTC---TTAATACTAGCAACATTGACAGTACCATATAATCCATCTATTACACCACACAGGAAA-------ATCAAGCCCAGCAGTACAGGACAGAAGAACTGACTCCAGCCAGGATCAAGCATTGCTTTGGCA-----------------TTGTTCTCCAATACCTGGGCCTTTCTTCTCCAA----TTGTTGGGGTAACCGGAGTGAGGAGCCTG-AGGGGACCCAAAGATGTTCTCCTGGTAGGATTCCCCGCCATGGTCTTCTGCATTTGTAGACATTTT-GATTGGTTCCATTTC--------TAAGAGCCAATTATCTGTGCTTTAACGTGAAATAAGGAACCTGCCTTCTGATCTTCAAGAATATGTACATGGACACACACCTTTCAGATTCAACTC-TGAGATTTTTGGTTTTAAACAAACAATTGTGTTCATCACAAATGAAGAGTCCCTCAAGCAGCAGCCTCCTGG--AATCACCTGCTGAGTCCAAATCTTGTAGCCCTTAAAAATAC-----TATTTTTACAAAGTAATAAGTATTTAGGGTGCTATGAAAAATGCAATTCGAAAAAGTACATTGGTTTTTAAGAACAAGAGGAACTATTTAGAAATTATACAATATATTAACAAAAGTAAATATTTAATATATCTCAAACACAAAAATGTAAAAACCGGTTACCAAACATCAAGAAAAACTT-AAACTTGTAAAATGCA---TTTAAATGTATTTTATCTTCATTCTATTATTAGCAGATAATCTTAA----------------TAAAAATGAG-CTGTTATTTAAAGCAAAATATCATGTAATTTTAGATTTATCA--CTTTCTATTTCTATGGAAAAGCAACACCAGCATGCATTGTTGCTGAAAGTGAAACAGTTTTCTGATTCTGTTCTGTTCCACTCTGCGTTCTGAGATGTGTATCAGACACCAGCCACACACCCTAGATGTGCTCGGGGCACAGCCTGGCCCCACACAGCACTCTAGTCTGCAGGTGGGCACCTAAGGCCCTATCATTCCCACTTCTTATTGTCATATTTACTTATTTATCAGCACCTCTATCCATCTTTAAATGACTT--AAGTGAGAGTACATTTAAGTAGCTTAGATGTTCCTAAGCTTCCGCAGAGCACGTCGCATCTGT-----------GACAGCAATTCAGAAA-AAGAACAAATTTTATTTTATTCTTAATAGTACACAGCATAAGAGAACAGCTTAGGCAGTTTACTGTAA--CTGATGGTCCTGATGTCCTTATCTATAAACTAAAAACTCCCCACAGAAGCT-------TCTGTAAGTATA---ATGTTAAATAAGTCTGTAAACACAAAT------------AACAA-GAATGCAATCCAAGTGCTCAGTTATGGGAAACTGGTGAAGAAAGTTACTGGTAAAC-CCACTGtgatgatgatgatg---atgtgtgtgtgtgtgtgtgtgtgta--catgtcagcttggctcagtgacagtccttagttatttaagctaggtgct-gctgtgaaggtattttgca i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73221657 2539 - 125196307 atatat-tttttatatcccttctatttttggg---aaaaaaaaat--------gccccagGAAGGTCTGATCACCAAATCCTTCCAGAGA--------GTGGTCTTCCAAGCCAAGGCG--GTTTTCAGTCCCACCCACTGAAATCATCCAGTCCTTCATTCACCTATGTCAACCCAGCTCGGA---GGTGTGACCTGCGAGATCCTTCATGCAATCAAGAAGTCAggcctccacctggtcct-ggggGTCATCTGAGGCCCGCAGTTTTGGAA-------GAGGAA------------------------------CTGGCTACCCACTGTG--GGGACATGTACCATGCCCACTGTGGGC---CT-GCTTTTCATCCCTGAATTCACCCCCCACAGAATG-----GTTGTCATATCTAGCTAT-CTAATAAGCTTGAGGGCAC--TGTGTCCCCTGTGGGATGTCCCCA-TGTCAGAGCCCACATGCTTGACCATGCAGGCTGATGCAGTGACAAGCAC--GAAATATCGTGATTATAGTTCCTGCTCTCCTTTCCAGGGCTTTGAGCCCAGCACATGATGTTGTGTGTTTCTTGTTCCACCAACTGGCTGCTGTGGAATGACTAGGAAACCTCTTGGATGAG------------------------GGTGGCATCTGGGCACAGGTCAAACTTTCTGAGAGTCTTTTTAACCTCTTTCACTGCAGCCAGGAATGGCTGGTTCT---CTGCTGCTGCTTGCAGGGA------CTGTCCCATCCATACACGGGTCT---------------GTGCTGGCTTTTGCCACCTGGGCATGTACGGCCACCATCTTGCCTGCTCAGCTAGTTCCATCCCTGGGTTCTAGAATGAGGTCATAATGATGCCCATTATGACAGATCAGCCCAAGGCCGCACACTGACTTAATCAATAAACAGGTGGGGCAGAGCT----GTGATTAAGAAACTGAGTCAGTCAATTCCCACTTGGGAATAGACAGCATGAAGGCTTTAAACCTCTCTGAACCTGATCAGCATT------GGCAATGA--CCTTCTGCAGATCCAACAACAGCACAGAAGAACGTATCATCAGGAATACATTTGGATATTGACACAACTTCATCCGCAGTCGGCTTGTCATCCTGAGCTCCCTTCCCAGGCAGCGTGGATATTGCACTGGATTTTGCTGACCAGGGAGTTGGGTTATAAGTGGTAACTC-TAACCTC---TTAATACTAGCAACATTGACAGTACCATATAATCCATCTATTACACCACACAGGAAA-------ATCAAGCCCAGCGGTACAGGACAGAAGAACTGACTCCAGCCAGGATCAAGCATTGCTTTGGCA-----------------TTGTTCTCCAATACCTGGGCCTTTCTTCTCCAA----TTGTTGGGGTAACCGGAGTGAGGAGCCTG-AGGGGACCCAAAGATGTTCTCCTGGTAGGATTCCCCGCCATGGTCTTCTGCATTTGTAGACATTTT-GATTGGTTCCATTTC--------TAAGAGCCAATTATCTGTGCTTTAACGTGAAATAAGGAACCTGCCTTCTGATCTTCAAGAATATGTACATGGACACACACCTTTCAGATTCAACTC-TGAGATTTTTGGTTTTAAACAAACAATTGTGTTCATCACAAATGAAGAGTCCCTCAAGCAGCAGCCTCCTGG--AATCACCTGCTGAGTCCAAATCTTGTAGCccttaaaaatac-----tatttttacaaAGTAATAAGTATTTAGGGTGCTATGAAAAATGCAACTCGAAAAAGTACATTGGTTTTTAAGAACAAGGGGAACTATTtagaaattatacaatatattaacaaaagtaaatatttaatatatctcaaacacaaaaatgtaaaaaccggttaccaaacatcaagaaaaactt-aaacttgtaaaatgca---tttaaatgtattttatcttcattCTATTATTAGCAGATAATCTTAA----------------TAAAAATGAG-CTGTTATTTCAAGCAAAATATCATGTAATTTTAGATTTatca--ctttctatttctatggaaAAGCAACACCAGCATGCATTGTTGCTGAAAGTGAAACAGTTTTCtgattctgttctgttccactctGTGTTCTGAGATGTGTATCAGACACCAGCCACACACCCTAGATGTGCTCGGGGCACAGCCTGGCCCCACACAGCACTCTAGTCTGCAGGTGGGCACCTAAGGCCCTATCCTCCCCACTTCTTATtgtcatatttacttatttatcagCACCTCTATCCATCTTTAAATGACTTAAAAGTGAGAGTACATTAAAGTAGCTTAGATGTTCCTAAGCTTCCGCAGAGCACGTCGCATCTGT-----------GACAGCaattcagaaa-aagaacaaattttattttattcttaatagtACACAGCATAAGAGAACAGCTTAGGCAGTTTACTGTAA--CTGATGGTCCTGATGTCCTTATCTATAAACTAAAAACTCCCCACAGAAGCT-------TCTGTAAGTATA---ATGTTAAATAAGTCTGTAAACACAAAT------------AACAA-GAATGTAATCCAAATGCTCAGTTATGGGAAACTGGTGAAGAAAGTTACTGGTAAAC-Ccactgtgatgatgatgatg----------tgtgtgtgtgtgtgtgta--cgtgtcaGCTTGGCTCAGTGACAGTCCTTAGTTATTTAAGCTAGGtgct-gctgtgaaggtattttgca i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72053727 2520 - 125710982 ATATAT-TTTTTATATCCCTTCTATTTTTGGG--AAAAAAAAAAT--------GCCCCAGGAAGGTCTGATC-----ATCCTTCCAGAGA--------GTGGTCTTCCAAGCCAAGGCA--GTTTTCAGTCCCACCCACTGAAATCATCCAGTCCTTCATTCACCTATGTCAACCCAGCTCGGA---GGTGTGACCTGCGAGATCCTTCATGCAATCAAGGAGTCAGGCGTCCACCTGGTCCT-GGGGGTCATCTGAGGCCCGCAGTTTTGGAA-------GAGGAA------------------------------CTGGCTCCCCACTGTG--GGGACATGTACCATGCCCACTGTGGGC---CT-GTTTTTTATCCCTGAATTCACCCCCTACAGAATGGTTCAGTTGTCATATCTAGCTAT-CTAATAAGCTTGAGGGCAC--TGTGCCCCCTGCGGGATGTCCCCA-TGTCAGAGCCCACATGCTTGAC------------------GACAAGCAC--GAAGTATCGTGATTATAGTTCCTGCTCCCCTTTCCAGGGCTTTGAGCCCAGCACATGATGTTGTGTGTTTCTTGTTCCACCAACTGGCTGCTGTGGAATGACTAGGAAACCTCTTGGATGAG------------------------GGTGGCATCTGGGCACAGGTCAAACTTTCTGAGAGTCTTTTTAACCTCTTTCACTGCAGCCAGGAATGGCTGGATCT---CTGCTGCTGCTTGCAGGGA------CTGTCCCATCCATACACGGGTCT---------------GTGCTGGCTTTTGTCACCTGGGCATGTACGGCCACCATCTTGCCTGCTGAGCTAGTTCCATCCCTGGGTTCTAGAATGATGTCATAATGATGCCTATTATGACAGATCATCCCAAAGCCGCACACTGACCTAATCAATAAACAGGTGGGGCAGAGCT----GTGATTAAGAAACTGAGTCAGTGAATTCCCACTTGTGAATAGACAGCATGAAGGCTTTAAACCTCTCTGAACCTGATCAGCATT------GGCAATGG--CCTTCTGCAGATCCAACAACAGCACAGAAGAACGTATCATCAGGAATACATTTGGATATTGACACAACTTCATCCGCAGTCAGCTTGTCATCCTGAGCTCCCTTCCCAGGCAGCGTGGATATTGCACTGGATTTTGCTGACCAGGGAGTTGGGTTATAAGCGGTAACTC-TAACCTC---TTAATACTAGCAACACTGACAGTACCATATAATCCATCTATTACACCACACAGGAAA-------ATCAAGCCCAGCGGTACAGGACAGAAGAACTGACTCCAGCCAGGATCAAGCATTGCTTTAGCA-----------------TTGTTCTCCAATACCTGGGCCTTTCTTCTCCAA----TTGTTGGGGTAACTGGAGTGAGGAGCCTG-AGGGGACCCAAAGATGTTCTCCTGGTAGGATTCCCCGCCACGGTCTTCTGCATTTGTAGACATTTG-GATTGGTTCCATTTC--------TAAGAGCCAATTATCTGTGCTTTAACGTGAAATAAGGAACCTGCCTTCTGATCTTCAGGAATATATACATGGACACACACCTTTCAGATTCAACTC-TGAGATTTTTGGTTTTAAACAAACAATTGTGTTCATCACAAATGAAGATTCCCTCAAGCAGCAGCCTCCTGG--AATCACCTGCTGAGTCCAAATCTTGTAGCCCTTAAAAATAC-----TATTTTTACTAAGTAATAAGTATTTAGGATGTTATGAAAAATGCAATTTGAAAAAGTACATTGGTTTTTAAGAACAAGAGGAACTATTTAGAAATTATACAATATATTAACAAAAGTAAATATT-----TATCTCAAACACAAAAATGTAAAAACCGGTTACCAAACATCAAGAAAAACTT-AAACCTGTAAAATGCA---TTTAAATGTATTTTATCTTCATTCTATTATTAGCAGATAATCTTAA----------------TAAAAAAGAG-CTGTTATTTAAAGCAAAATATCATGTAATTTTAGATTTATCA--CTTTTTATTTCTATGGAAAAGCAACACCAGCATGCATTGTTGCTGAAAGTGAAACAGTTTTCTGATTCTGTTCTGTTCCACTCTGTGTTCTGAGATGTGTATCATTCACTGGCCACACACCCTAGATGTGCTCGGGGCACAGCCTGGCCCCACACAGCACTCTAGTCTGCAGGTGGGCACCTAAGGCCCTATCATTCCCACTTCTTATTGTCATATTTACTTATTTATCAGCACCTCTATCCATCTTTAAATGACTT--AAGTAAGAGTACATTAAAGTAGCTTAGATGTTCCTAAGCTTCCGCAGAGCACGTCGCATCTGT-----------GACAGCAATTCAGAAA-AAGAACAAATTTTATTTTATTCTTAATAGTACACAGCATAAGAGAACAGCTTAGGCAGTTTACTGTAA--CTGATGGTCCTGATGTCCTTATCTATAAACTAAAAACTCCCCACAGAAGCT-------TCTGTAAGTATA---ACGTTAAATAAGTCTGTAAACACAAATAAC---------AACAA-GAATGTAATCCAAATGCTCAGTTATGGGAAACTGGTGAAGAAAGTTACTAGTAAAC-CCACTGTGATGATGATGAtg--------tgtgtgtgtgtgtgtgtgta--catgtcaacttggctcagtgacagtccttagttatttaagctaggtgct-gctgtgaaggtattttgca i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75512316 2591 - 121768101 GTATCTATTTTTATATCCCTTCTATTTGAGGGGGGAAAAAAGTAT--------ACTCCAGGAAGTTCTGATCACCAAATCCTTCCAGAGATCCAGAGTTCGGTCTTCCAAGCCAAGGAG--GCTTTCAGTCCCACCCACTGAAATAATCCAGTCCTTTTTTCACCTGTGTCAACCCCGAACAGA---GGTGTGGCCTGCGATATCCTTCATGCAATCA---ATTCGGGCCTCCCCCTGGTCCT-GGGGGTCATCTGAGGTCCGCAGCCTTGGCA-------GAGGAATGTTTTCTGCCAGCAATTCCCACAGATGGGCTGGCTCCCCCAAGTG--GGCATGTGCACGATGCCCAGTGTGGGC-CTCT-GTTTTTCATCCCTGAATCTATCCCCCACAGAATGGTTGAGTTGCCACACCTACCTCT-CTAATAAGCTTGAGGGTAC--TGTGTCCCCTGGGGGACGTCCCCA-TGTTGGAGCCCACGTGCTTGACCATGCAG------------------------------GTGATTATAGTTCCTCCTCTCCTTTCCAGGGCTTTGAGCCCAGCACATGAAGTTGGGCATTTCTTGTTCCCCCAGTTGGCTGCTGTGGAATGACTAGGAAACTTCTTGGATGAGAGTTTAAACCCCATAGGATGCCA-GGTGGCACCTGGGCACAGGTCAAACTTTCCGAGAGCATTTTAAACCTCTTTCACTGCAACCAGGAATGGCTGGCTCTCTGCTGCTGCTGCTTGCAGGGATTACAATTGTCCCATCCATACCTTGGTCT---------------GTGGTGGCTGTTGTTACCTGGGCATGTGTGGCCACCACCTTGACTGCTCAGGTAGTTCCTTCCCTGAGTTCTAGAATGATGTCACAATGATGCCCATTATGACAGATCAGTCCAAGGCTGCACACTGACCCAACCAATCAACATGTGGGTCAGAGCT----GTGATTAAGAGACTAAGTCAGTGAATTCCCAATTGTGAATAGACAGTATGAAGGCTTGAAACCTCTCTGAACCTGATGGGCATA------GGCAGTGA--TCTTCTGCAGATCCAACTACGGCACAGAAGAGTGTCTCATCCGGAACACATTTGGATAGTGACACAACTTCATTTGCAGTCAGCTTGTCATCCTGAGCTCCCTTCCCAAGCAGCATGGATATTGCACTGGA-TTTGCTGACCAGGGAGTTGGGTTATAAGGGGTAACTCTTGGCCTCTTGTTAATATTAGCAACATTGACAGTACCATATGATCCATCTATGACACCGCACAGGGAA-------ATCAAGTCCAGTGTTATAGGACAGGAGAAATGACTCCAGCCAGGATCAAGCATTGCTTTGGCA-----------------TTGTTCCCCTATACCTGGGCCTTTCTTCTCCGA----TTGTTGGGGTAACTGGAGTGAGGAGCCTG-AGGGGACCCAACGATGTTCTCTTGGGAGAATTTCCTCCCATGGTCTTCTCCATTTGTAGACATTTT-GATTGGCTCGATTTC--------TAAGGACCAATTATCTGTGCTTTAACCTGAAATAAGGAACCTGCTTTCTGATCTTCAAGAA----TACATGGACACACACCTGTCAGATTCAACTC-AGAGATTTTTGGTTTTAAAGGAACAATTGTGTTCATCACAAATGAAGGTTCCCTCAAGGAGCAGCCTGCTGG--AATCACCTCCTGAGTCCAAATCTTGTACCCCTTAAAAATACTTACTTAGTATTTACAAGTAATAAGTATTTAGGGTGTTATGAAAAATGCAATTTGAAACGGTACATTGTTTCTTAAGAACAAGAGGAACTGTTTAGAAATTATACAATGTATTAACAAAAG----TACTGAATATATCTCAAACACAAAAATGTAGAAACCAGTTACCAAACCTCAAGAAAAACTT-AAACTTGTAAAATGCAAAGGTTAAAAGTATTTCATCTTCATTCTATTGTTGGCAGATAACCTTAA----------------TAAAAATGAG-CAGTTATTTCCAGCAAAATGGCATGTAATTTTAGACGTATCA--CTTTTTATTTCTATGGAAAAGCAACACTGGCATGTATCGTTGCTGAAGGTGAGGCAGCTTTTTGATTCTGTTCT------------ATTCTGAGATGCATATTAGACACTGGGCACACACCCCAGATGTGCTCAGGGCACAGCCTGGCCCCACAGAGCACTCCTGTCTGCAGGTGGGCACCTAAGGCCCTGCCATTCCCACTTCTTA---TCATGTTTACTTAGTGCTCAGAACCTCTGCGCATCTTTAAATGACTT--CAGTGAGAGTAGATTAAAGTGGCTTAGATGCTCCTAAGCTTCCTCAGAGCATGTAGCAACTGT-----------AACAGCAATTCAGAAA-AAGGACAAAATTTATTTTACTCTTAATGGTACACAGCATAGGAAAACAGCTTAGGCAGTTTACTGTAA--CTGATGGCCCTGATGTCCTTGTCTATAAACTATAAACTCCCCACAGAAGCT-------TCTGTAAGTATA---ATGTTAAATAAGTCTATAAACACAAATAACAGCAGCAAGAAGGA-GGAGGTCATCCAAATGCCCGGTTACAGGAAACTGGTGAAGAAATGTACTGGTAAAC-CCACTGCGA------TGgtgtgtgtgtgtgtatgtgtgtgcatgtgta--tgtgtcaacttggctcagtgacagtccctagttattcaagctaggtgct-actgtgaaggtattttgca i calJac3.chr12 C 0 C 0 s canFam3.chr4 27679971 2573 + 88276631 GTATACATTTTTATGTCTTTTCTACTTTTGAAGAGGAAAAAAAACCAAACCAAACTCCAGGAAGCTCTGATCACCAAATCCTTCCAGAGA--------GAGATCTTCTAAGCCGAGGAGTCACTTTCAGCCCCGCCTGCTGA--------AGTCCTTCATTCGCCCACCCCACCTTGTCACTGATGGGTTGTTTTCTGCCACAGACTT---------------TCACATGTCCCCCTGGTCCTGGGGGGTCATCTGAGGCCTGCAGTGGCGAAACCACAGCAAAGAG-------TCCGAGCTTTTCCCCCAGGCGGGCCGGCTCACAAGGGAACCAGGACCTGCACCTCCCACACTGGGGGGTCTCTGGTTTTTCATCCCTGCACTCCCTCCCCCCCCCATCGATGAGATGTCATCTCTGACTATCCCAAGTAGCCTGAGGGCACGGGGTGTACCCTGGAGGACGTCTTCACCGTCACAGCCCACTTGTGTGAACCTGCCAGCTAATGTAGTAACAAGC-C--TGAGCGCTGTGGCTGCAGTTCCTGGTGTCCTTTCTAGGGCTGTGGACCCAGCACATGATGGTGTGTGTGCTTTCT--CACCAACTGGCTGCTGTGGGGACATCAGAAAATGTTTCGG-TGAGAGTTGAGCCCTG------------TGGGGTAACTGAGC------CAGCCGACTGAGGGGCCTTCTTTACCCCTTGGACCACAG-CAGGAATGGCTGAATGT---CCACTGCCACTTGGGGG--------CTATGC--TCCCAACGCTGGCCTCGGATCCCCCCGACAGTGCTGGCTGCTGTTTTATGGGCACGTTCAGCCGTGTCTTAACTTCCTCAGCTAGCCCCTACCCTGGGGACGTGAATGACCCCGTCGTGACAGCCAATACAAGGATCCCACCCAGGGCCCCGCAATGACCCAGTA----GGTATTTGGAGCAGAGCTGTAAGTGATCAGATCAACGACTCAGTCAGTTCCTGTTTAGGGACAGAAACCTCACAGGCCTTCGACCTCTTAGAACATGATCAGCACCTCTTAGAACAATTATGTCGTCTGTGGATCCAACGATGCCATA-------GTGTC-CCAGGGACAGGAGTGCATATTGACACAACTTTGATCGCAG-CAGTCTGTCCTCCCAGGCTCCCTTCT-------TGTGATTGCTGCACCCACTTTTGTTGGCTGAGTAGCTAGATGGTAAGCAGTAACCCCCGACCTCCTGTGGGTACCACCGTCATCAAGGACATCACAGAATCCATCTACAACACAGCACAGGGAATCCAACCATCCAGCCTGCTGTTACAGGATTGAAGGATGGACTCCAGTCAGGACAAAGCACTGCTTTGGCACGGAGGCCAACATACTGCTGTCCACTGACACCTGGGCCCTCCTCCTTGGACTCTTTGTTGGGCAAAC--AAGTCAGCAGCCTACAAAAGACCCAGAGAAGTTCTTCTGCTAGGCTTCCCT-CCATGTTCTTTTGCATTTGTAGGCATTTTCGATCGGCTCCTTCCCTGCTTTCTTAAGGGTCAATTACCTGGGCTTTGACCTGAAATAAGGAACCTGCTTTCTGATCTTCCACGATATGTACACAGACACACACCTTTCATATTCAACTC-TGAGATTTTTGGTTTTA----AATAATTGTTTTCCCCACATATGAAGATGACCTCAAGCTGCAGTCTCCTAGGCAATCACTTGCTTAGTCTGGACCCTGTAACATGTACAAATAG-----------------------ATTATTCAGAATGCCATTAA----TTAATTTAAAAAAAGACGCTGATGTCTAAGAACAAAGGGAATTATTTAGAGATTATAAAATG--TTATCGAAAG--------TAATATATTTCAAACACGAAAATGTAAAAACAAGTTACTGCACTTCAAGAGAAATGT-CAACTTGTCAAATGCC-----AAAGCATACAATACCTTCA---AAGTATTAGCAGATAATCTTAAAAAATAAGCTGTTTGTCAAAAAAGAGACTGTCATTTCCAGCAAAATGCCGTGCAGTTTTAGAGTTATCATTCTTCTTATTTGCACAAAGAACACACACCAGCATGCATTGTTGCTGAAC-TCAGAGGTCCACCTGGTTCTGTTTTTTATTGTTATGTATTCTTGGATGTGTGCTAGACACCATCCATGTGCCAC-CATGTGCT-------------------GCAGAGCCCTCTTGTCTGCAGGTGGGCCCTGGGGGCCCTACTAGGTCCCCCTTCTCTCTTCACAGTCACTTAGTTCTCAGAATCTCTGTCCATCTGCCATGGACTC--AGGCGGGTG-----TAAAGTAGCTGAGATGGTT---AACGTCCCCAGAGCAAGTAGCATCTGTGCGGAGCTAAAGAGAGCAACTCCAAAATAGGAACAAGTCTGCTTTTATCCCAAAGGTAATACGGCATGAGAAAAGGGCTTAGGGAATTTGCTGTAACCCTTAAAGCCTTGGTGTTTTTATCTGTGAAGCACAAACTCCACACAGAAGATAAATAAGTCtatatatatatatatattaaaaaaGTCTATAGAC------------------AACAACAAACTTAATCCAAATGCCCGTTTGTGGGAAACTGGTTAAGTAAATAATTGGCAAATGCCCCAGTGA------TGCTT----------------TCTTTTTtttga--tgggacaacgtggctaggccacaggccc--attatttcaac-----actaactgtgaaggcgttttcca i canFam3.chr4 I 21 I 32 e mm10.chr14 24093499 39790 + 124902244 I a score=58093.000000 s hg38.chr10_KI270825v1_alt 23260 18 + 188315 gatgtgatgaatattaag s panTro4.chr10 76393876 18 + 133524379 gatgtgatgaatattaag i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76061585 18 - 133410057 gatgtgatggatattaag i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35004043 18 + 104879549 gacgtgatggatattaag i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73797691 18 - 130959383 gatgtgatggatattAAG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75359835 18 - 133195287 gatgtgatggatattAAG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73224196 18 - 125196307 gatgtgatggaTATTAAG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72056247 18 - 125710982 gatgtgatggatattAAG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75514907 18 - 121768101 gatgtgatggatattaag i calJac3.chr12 C 0 C 0 e canFam3.chr4 27682544 32 + 88276631 I e mm10.chr14 24093499 39790 + 124902244 I a score=474576.000000 s hg38.chr10_KI270825v1_alt 23278 266 + 188315 --agtatcctggaccgggtgtggtggctcacacctgtaatcccagcacttt-------------------------------gggaggctgaaa--------t---------------------------------------------------------------------gggtggatcatgaggtcaggagaccgagaccatcctggctaacacggtgaaa-cccgtctctactgaaaaatacaaaaaattagccgggcgtggtggcaggtgtctgtagtcccagctacttgggaggctgaggcaggagaatgg------------------------------catgaacctgggaggcagagcttgcagtgagccaa------atctctgcactcc--------------------------------------------------agcctgagcaac s panTro4.chr10 76393894 266 + 133524379 --agtatcctggaccgggtgtggtggctcacacctgtaatcccagcacttt-------------------------------gggaggctgaaa--------t---------------------------------------------------------------------gggtggatcatgaggtcaggagaccgagaccatcctggctaacacggtgaaa-cccgtctctactgaaaaatacaaaaaattagccgggcgtggtggcaggtgtctgtagtcccagctacttgggaggctgaggcaggagaatgg------------------------------catgaacctgggaggcagagcttgcagtgagccaa------atctctgcactcc--------------------------------------------------agcctgagcgac i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76061603 253 - 133410057 --agtatcctgggccgggcgcggtggctcacgcctgtaatcccagcacttt-------------------------------ggga------------------------------------------------------------------------------------------ggatcatgaggtcaggagaccgagaccatcctggctaacacggtgaaa-cctgtctctactgaaaaatacaaaaaattagccgggcgtggtggcaggtgtctgtagtcccagctacttgggaggctgaggcaggagaatgg------------------------------catgaaccccagaggcggagcttgcagtgagccca------atctctgcactcc--------------------------------------------------agcctgcgcgac i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35004061 266 + 104879549 --agtatcctgggctgggtgcggtggctaacgcctgtaatcccagcacttt-------------------------------gggaggctgaaa--------t---------------------------------------------------------------------gggtggatcatgaggtcaggagaccgagaccatcctagctaacacggtgaaa-cctgtctctatggaaaaatacaaaaaattagccgggcatggtggcaggtgtctgttgtcccagatacttgggaggctgaggcaggagaatgg------------------------------catgaacccgggaggcggagcttgcagtgagccga------atatctgcactcc--------------------------------------------------agcctgtgcgac i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73797709 350 - 130959383 ATAGTATCCTAggctgggcgcggtggctcacacctgtaattccagcacttt-------------------------------gggggaccgaggcgggtggat--------cacgaggtcaggtggctca--------cgcctgtaatcccagcactttgggagaccgaggcgggtggatcatgaggtcaggagatcaagactatcctggctaacacggtaaaatcctgtctttactgaaaaatacaaaaatttagctgggcgtggtggtgggcacctgtagtcccagctacttgggaggctgaggcaggagaatggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn------------------------------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn------------ i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75359853 336 - 133195287 AGAGTATCCTAggctgggcgcggtggctcacacctgtaattccagcacttt-------------------------------gggggaccgagg--------cgggtggatcacgaggtcaggtggctca--------cgcctgtaatcccagcactttgggagaccgaggcgggtggatcatgaggtcaggagatcaagactatcctggctaacacggtaaaatcctgtctttactgaaaaatacaaaaatttagctgggcgtggtggtgggcacctgtagtcccagctacttgggaggctgaggcaggagaatgg------------------------------catgaacccaggaggcggagcttgcagtgagccgagaccacacctttgcactcc--------------------------------------------------agcctggaggac i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73224214 336 - 125196307 AGAGTatcctaggctgggcgcggtggctcacgcctgtaattccagcacttttggggaccgaggggggtggatcacgaggtcgggtggctcacgc--------c---------------------------------------tgtaatcccagcactttgggggaccgaggcaggtggatcatgaggtcaggagatcaagactatcctggctaacacggtaaaaccctgtctctactgaaaaatacaaaaatttagccaggcgtggtggtgggcacctgtagtcccagctacttgggaggctgaggcaggagaatgg------------------------------cgtgaacccaggaggcggagcttgcagtgagccgagaccacacctttgcactcc--------------------------------------------------agcctggaggac i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72056265 336 - 125710982 AGAGTATCCTAggctgggtgtggtggctcacgcctgtaatcccagcacttt-------------------------------gggggaccgagg--------caggtggatcacgaggtca--------ggtggctcacgcctgtaatcccagcactttgggggaccgaggtgggtggatcacgaggtcaggagatcaagactatcctggcttacacggtaaaaccctgtctctactgaaaaatacaaaaaattagccgggcgtggtggtgggcacctgtagtcccagctacttgggaggctgaggcaggagaatgg------------------------------cgtgaacctgggaggcggagcttgcagtgagccgagatcgcgccactgcactcc--------------------------------------------------agcctggatgac i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27682544 32 + 88276631 I e mm10.chr14 24093499 39790 + 124902244 I e calJac3.chr12 75514925 0 - 121768101 C a score=32108.000000 s hg38.chr10_KI270825v1_alt 23544 31 + 188315 agagcgagactccgtctc-------aaaaaaaaaaaaa s panTro4.chr10 76394160 31 + 133524379 agagcaagactccgtctc-------aaaaaaaaaaaaa i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76061856 31 - 133410057 agagtgagactccgtctc-------aaaaaaaaaaaaa i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35004327 31 + 104879549 agagcgagactccgtctc-------aaaaaaaaaaaaa i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73798059 12 - 130959383 --------------------------aaaaaaaaaaaa i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75360189 31 - 133195287 acagcgagactaggtctc-------aaaaaaaaaaaaa i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73224550 38 - 125196307 acagcgagactaggtctcaaaaaaaaaaaaaaaaaaaa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72056601 21 - 125710982 acagcctg-----------------aaaaaaaaaaaaa i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27682576 8 + 88276631 agagcaag------------------------------ i canFam3.chr4 I 32 C 0 e mm10.chr14 24093499 39790 + 124902244 I e calJac3.chr12 75514925 0 - 121768101 C a score=1846327.000000 s hg38.chr10_KI270825v1_alt 23575 613 + 188315 a------gagtatcctgaaagatctgggtgagcccgattcaatcagttgaaaagctttaaaagcagaagcctaaaaaggccttaaaagttgaagcttccctg--aaaa---------agaaaagaaattccacccacaggcagtggcgtctgctgtacttgtgcctgtggagttccattctgctcattcacttccc-tcctgac--tgcccatagacaacagttgtggtctgtgcccatgacctccctgattctggacttgcttagccagcacccacaatcttgcaagccaattcctttaacaaatttg-------tatatata-----------tgaaatacactggttcttcctctctaattaaagcctggccaacacaCCCAAAAATTAGAA-GGGGATGCTGCTGTTAGAAGGAATAAGGTATACATTTTAGG-CCATTCAAGACTCCAATAAATG---ACAGTAAAATAATAGCAAAG---AAAAACCTTACTTTGGggttaagaaatcacagattg-----atacataaacttaattttgctcctctattaaaatcctactacaaaacagtaaatatagtaaaagaatttcttttaaaaggacattaattt-agaaatacagggaaagcagaggggcaacaaccacaaaatcattttag s panTro4.chr10 76394191 619 + 133524379 aaaaaaagagtatcctgaaagatctgggtgagcccgattcaatcagttgaaaagctttaaaagcagaagcctaaaaaggccttaaaagttgaagcttccctg--aaaa---------agaaaagaaattccacccacgggcagtggcgtctgctgtacttgtgcctgtggagttccattctgctcattcacttccc-tcctgac--tgcccatagacaacagttgtggtctgtgcccatgacctccctgattctggacttgcttagccagcacccacaatcttgtaagccaattcctttaacaaatttg-------tatatata-----------tgaaatacactggttcttcctctctaattaaagcctggccaacacaCCCAAAAATTAGAA-GGGGATGCTGCTGTTAGAAGGAATAAGGTATACATTTTAGG-CCATTCAAGACTCCAATAAATG---ACAGTAAAATAATAGCAAAG---AAAAACCTTACTTTGGggttaagaaatcacagattg-----atatataaacttaattttgctcctctattaaaatcctactacaaaacagtaaatatagtaaaagaatttcttttaaaaggatattaattt-agaaatacagagaaagcagaggggcaacaaccacaaaatcattttag i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76061887 613 - 133410057 a------gagtatcctgaaagatctgggtgagcctgattcaatcagttgaaaagctttaaaagcagaagcctaaaaaggccttaaaagttgaagcttccctg--aaaa---------agaaaagaaattccacccatgggcagtggcgtctgctgtacttgtgcctgtggagttccattctgctcattctcttctc-tcctgac--tgcccatagacaatagttgtggtctgtgcccatgacctccctgattctggacttgcttagccagcacccacaatcttataagccaattcctttaacaaatttg-------tatatata-----------tgaaaaacactggttcttcctctctaattaaagcctggccaacacaCCCAAAAATTAGAA-GGGGATGCTGCTGTTAGAAGGAATAAGGTATACATTTTAGG-CCATTCAAGACTCCAATAAATG---ACAGTAAAATAATAGCAAAG---AAAAACCTTACTTTGGggttaagaaatcacagattg-----atacataaacttaattttcctcctctattaaaatcctactacaaaacagtaaatatagtaaaagaatttcttttaaaagggcattaattt-agaaatacagagaaagcagaggggcaacaaccacaaaatcattttag i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35004358 608 + 104879549 -------gagtatcctgaaagatctgggtgagcccgattcaatcagttgaaaagctttaaaatcagaagcctaaaaaggccttaaaagctgaagcttccctg--aa-------------aaaagaaattccacccatgggcagtggcgtctgctgtacttgtgcctgcggagttccattctattcattctcttccg-tcctgac--tgcccatagacaatagttgtggtctgtgcccatgacctccctggttctggacttgcttagccagcacgcacaatcttgtaagccaattcctttaacaaatttg-------tatatata-----------tgaaaaacactggttcttcctctctaattaaagcctggccaatacaCCCAAAAATTAAAA-GGGGATGCTGCTGTTAGAAGGAATAAGGTATACATTTTAGG-CCATTCAAGACTCCAATAAATG---ACAGCAAAATAATAGCAAAG---AAAAACCTTACTTTGGggttaagaaatcacagattg-----atacataaatttaattttgctcctctattaaaatcctactacaaaacagtaaatatagtaaaagaatttcttttaaaaggacattaattt-agaaatacagagaaagcggaggggcaacaaccacaaaatcattttag i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73798071 612 - 130959383 aaaaa--gaGTATTCTGAAAGATCTGGCTGACCCCGACATAATCAGTTGAAAAGTTTTAAAAGCAGAAGCCTAAAAAGGCCTTAAAAGCTGAAGTTTCCCTG--AAAA---------AGAAAAGAAATTCCACCCATGCGCAGTGGCGTCTGCCGTACTTGTGCCTGCGGAGTTCCATTCTGCTCATTCTCTTCCC-TCCTGAC--TGCCCATAGACAATAGCTGTGGTCTGTGCCCATGACCTCCCTGATTCTGGACTTGCTTAGCTAGCACCCACAAT--------CCAATTCCTTTAACAAATTTGT-----ATATATATA-----------TGAAAAATACTGGTTCTTCCTCTCTAATTAAAGCCTGGCCAACACACCCCAAAATTAGAA-GGGGATGCTGCTGTTAGAAGGAATAAGGTATACATTTTAGG-CCCTTCAAGACGCCAATAAATG---ATAGTAAAATAATAGCAAAG---ACAAAACTTACTTTGGggttaagaaatcacaaattg-----atacataaacttaactttgctcccctattaaaatcctattataaaacagtaaacatagtaaaagaatttcttttaaaaggacactaatttaagaaatacagagaaagcagagaggcaacaaccacaaaatcattttgg i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75360220 612 - 133195287 aaaaa--GAGTATCCTGAAAGATCTGGCTGACCCCGATATAATCAGTTGAAAAGTTTTAAAAGCAGAAGCCTAAAAAGGCCTTAAAAGCTGAAGTTTCCCTG--AAAA---------AGAAAAGAAATTCCACCCATGCGCAGTGGCGTCTGCCGTACTTGTGCCTGCGGAGTTCCATTCTGCTCATTCTCTTCCC-TCCTGAC--TGCCCATAGACAATAGCTGTGGTCTGTGCCCATGACCTCCCTGATTCTGGACTtgcttagctagcacccacaat--------ccaattcctttaacaaatttgt-----atatatata-----------tgaaaaatactggttcttcctctctaattaaagcctggccaacacaCCCCAAAATTAGAA-GGGGATGCTGCTGTTAGAAGGAATAAGGTATACATTTTAGG-CCTTTCAAGACTCCAATAAATG---ATAGTAAAATAATAGCAAAG---ACAAAACTTACTTTGGggttaagaaatcacaaattg-----atacataaacttaactttgctcccctattaaaatcctattataaaacagtaaacatagtaaaagaatttcttttaaaaggacactaatttaagaaatacagagaaagcagagaggcaacaaccacaaaatcattttgg i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73224588 608 - 125196307 aaaaa--gagtatcctGAAAGATCTGGCTGACCCTGACATAATCAgttgaaaagttttaaaagcagaagcctaaaaaggccttaaaagctgaagcttccctg--aaaa---------agaaaagaaattccaccCATGGGCAGTGGCGTCTGCCGTACTTGTGCCTGCAGAGTTCCATTCTGCTCATTCTCTTCCC-TCCTGAC--TGCCCATAGACAATAGCTGTGGTCTGTGCCCATGACCTTCCTGATTCTGGACTTGCTTAGCCAGCACCCACAAT--------CCAATTCCTTTAacaaatttgt-----atatatata-----------tgaaaaatactgGTTC-TCCTCTCTAAttaaagcctggccaacacaccCCAAAATTAGAA-GGGCATGCTGCTGTTAGAAGGAATAAGGTATACATTTTAGG-CCTTTCAAGACTCCAATAAATG---ATAGTAAAATAACAGCAAAG---ACAAAACTTACTTTGGAGTTAAGAAATCACAAATTG--------CATAAACTTAATTTTGCTCCCCTATTAAAATCCTATTATAAAACAGTAAACATAGtaaaagaatttcttttaaaaggacactaatttaagaaatacagagaaagcaGAGAGGCAACAACCACAAAATCATTTTGG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72056622 589 - 125710982 aaaaa--gaGTATCCTGAAAGATCTGGCTGACCCTGATGTAATCAGTTGAAAAGTTTTAAAAGCAGAAGCCTAAAAAGGCCTTAAAAGTTGAAGCTTCCCTGAAAAAA---------AGAAAAGAAATTCCACCCATGGGCAGTGGCGTCTGCCGTACTTGTGCCTGAGGAGTTCCA---------------TCAC-TCCTGAC--TGCCCATAGACAATAGCTGTGGTCTGTGCCCATGACCTCCCTGATTCTGGACTTGCTTAGCCAGCACCCACAAT--------CCAATTCCTTTAACAAATTTG-------TATATATA-----------TGAAAAATATTGGTTCTTCCTCTGTAATTAAAGCCTGGCCAACACACCCCAAAATTAGAA-GGGGATGCTGCTGTTAGAAGGAATAAGGTATACATTTTAGG-CCTTTCAAGACTCCAATAAATG---ATAGTAAAATAATAGCAAAG---ATAAACCTTACTTTGGggttaagaaatcacagattg-----atacataaacttaattttgtccccctattaaaatcctattataaaacagta--------gaaagaatttcttttaaaaggacactaatttaagaaatacagagaaagcagagggacaacaaccacaaaatcattttag i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75514925 605 - 121768101 ----a--aagtatcct-aaagatctgggtgagcccgattcaatcagctgaaaagctttaaaagcagaagcCTAAGAAGGCCTTAAAAGCTGAAGCTTCCCTG--AA-------------AAAAGAAATCGCATCCTTGGGCAATGGTGTCTGCTGTGCCTGTGCCTGCGGAGTTCCATTCTGCTCATTCTCTTCCCTTTCTGAC--TGCCCAGAGACAACAGCTGTGGTCTGTGCCCGGGACCTCCCCGATTCTGGACTTGCTTAGC-AGCACCTGCAATCTTGTAAGCCAATTCCTTTAACAAATTTG-------CATATACA-----------T-AAAAACACTGGTTCTTCCTCTCTAATTAAAGCCTAATCAACA-GCCCACAAATTAGAAGGGGGATGCTGCTGTTAGAAGGAATAAGGTATACATTTTAGT-CCCTTCAAGAC-CCAATAAATG---ATGGTAAAACAATAGCAAAGAA-AAAAACCTTATTTTGGggttaagaaa--gcagactg-----atacataaagttaattgtgctcctctcttaaaatcctactacaaaacaataaatgtaataaaagaa-ttcttttaaaaagacagaaattt-agaaatacagagaaagcagagaggcaacaaccacaaaatcattttag i calJac3.chr12 C 0 C 0 s canFam3.chr4 27682584 616 + 88276631 ------ggagtgtcctggacaatgtgggtgag-ctaatgcattcag-------accttagaagcagaagcCTGGAAAGGCTGGGAAAGCTGAAACCTCCCTG--GAAAGGGGGGGGGGGGGCGGGGACTGTATGTGTAGACAG------CTGCTGCAGTTCT-CCTATGGAGTTCCACTC-GCTCACTCTTCCTTT-GTCAGTCGGTGCCCGGAGAGCCCCACC--------TGCCCGTGACCCTCC-------GTGCCTGC-TAGCCATCACTCACACTCACAGGCGCCCACTACTTGAAAGAGATTTCTGTTGTTACACACGCCTCCTCGTATTGGCTCCTATTGGCCCTGCCTCTCTGGTAGAGGCCTGACT-CCCCACCCACCAACTGGCA-GAGGGCACTGCCGTT-GAAGGAAACGAGTATGTGTTTTAGGTCCTTCCAAGAGCCCAGTGAGAGTAAAAACTAAAGGAACACGAAAGGGTGTAAGCCTTACTTCTGGGATTAAAAAAAACAAACTAGAATTATACATACACTTAATTTTGTT----TATTAAAACCTCACTAAAGCAAAGTAAATATAGGAAAAGGATTTCTTTTAAAAAGACATAATTCC-GGAAACATGGGAAGACCAGAGAAACAGCCATGGCAAAATCATTTTAG i canFam3.chr4 C 0 I 230 e mm10.chr14 24093499 39790 + 124902244 I a score=1651353.000000 s hg38.chr10_KI270825v1_alt 24188 525 + 188315 aagttgaaaaggagagagaccagtggcaaattccttagcagacctgagaataccacacccaaaaccagcagaagaaaatgctaagaatcTTTAAATACATAGAACTGTGGCATTGTTACCCCATGGAAGTTGGGGTGGAGGGGA-GGCTTAAGTATGGAATGGGTAAAAGCTGGGTGAGAAACCCATTCCTAGTTTCCAAACTACAGAgctacagccttttcctcaacatggccgaagctaggagg-ttattctctagagagtataagtgaggtttggaactaggggatgccagcatggatccagagaatgggcgccacactgaaaacaaaaggatgaagtgaccata---tgctgtcatgctgaacgctgagtgcaaagagtcctagccttcttcccctactgggctccaagatgcggccaggccgatccttcccatcacataggaagggccccttgggg-taatctggcaaatctctgaagacctaaagagagcactgctgtgcttccccagtgaacagcccagccaga s panTro4.chr10 76394810 525 + 133524379 aagttgaaaaggagagagaccagtggcaaattccttagcagacctgagaataccacacccaaaaccagcagaagaaaatgctaagaatcTTTAAATGCACAGAACTGTGGCGTTGTTACCCCATGGAAGTTGGGGTGGAGGGGA-GGCTTAAGTATGGAATGGGTAAAAGCTGGGTGAGAAACCCATTCCTAGTTTCCAAACTACAGAgctacagccttttcctcaacatggccgaagctaggagg-ttattctctagagagtataagtgaggtttggaactaggggatgccagcatggatccagagaatgggcgccacactgaaaacaaaaggatgaagtgaccaca---tgctgtcatgctgaacgctgagtgcaaagagtcctagccttcttcccctactgggctccaagatgtggccaggccgatccttcccatcacataggaagggccccttgggg-taatctggcaaatctctgaagacctaaagagagcactgctgtgcttccccagtgaacagcccagccaga i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76062500 525 - 133410057 aagttgaaaagcagagagaccagtggcaaattccttagcagacctgagaataccacacccaaaaccagcagaagaaaatgctaagaatctttaaatacacagaactgtggcgttgttaccccatggaagttggggtggagggga-ggcttaagtacggaatgggtaaaagctgggtgagaaacccattcctagtttccaagctacagagctacagccttttcctcaacatggctgaagcgaggagg-ttattctctagagagtataagagaggtttggaactaggggatgccagcacggatccagagaacgggtgccacactgaaaacaaaaggataaagagatcata---tgctgtcacgctgaatgctgagtgcaaagagtcctagccttcttctcctactgggctggaaaatgcggccaggccgatccttcccatcacataggaagggccccttgggg-taatctggcaaatctctgaagacctaaagagagcactgctgtgcttccccagtgaacagcccagccaga i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35004966 525 + 104879549 aagttgaaaagcagagagaccagtggcaaattccttagcagacctgagaataccacacccaaaaccagcagaagaaaatgctaagaatctttaaatacacagaactgtggcattgttaccccatggaagttgaggtggagggga-ggcttaagtatggaatgggtaaaagctgggtgagaaaccgattcccagtttccaagctacagagctacagccttttcctcaacatggccgaagctaggtgg-ttattctctagagagtataagagaggtttggaactaggggatgccagcacggatccagagaatgggcgccacactgaaaacaaaaggatgaagtgaccata---tgctgtcatgctgaatgctgagtacaaagagtcctagccttcttcccctactgggctccaagatgcggccaggccgatccttcccatcacataggaaaggccccttgggg-taatctggcaaatctctgaagacctaaagagagcactgctgtgcttccccagtgaacagcccagccaga i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73798683 524 - 130959383 aagttgaaaagc--agagaccagtggcaaattccttaacagacctgataataccacatccaaaaacagcagaagaaaatgttaagaatctttaaatacacagaactgtggcattgttaccccacagaagttggggtggagggga-cgcttaagtacagaatgggtaaaagctgggcgagaaactgattcctagtttccaagccacagagctacagccttttcctcgacatggccgaagctaggaggtttattctctagagagtgtaagaggggtctggaactaggggatgccagcacggatccagagaatgggcgccacactgaaaacaaaaggatgaagtgaccaca---tgctgtcatgctgaatgctgagtgcgaggagtcccagccttcttcccctactgggctcaaagatgcggccaggccaatctttcccgtcacataggaaggggccccttggg-taatctggcaaatctctgaagacctaaagagaccactgctgcgcttccccagtgaatagcccagctaga i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75360832 524 - 133195287 aagttgaaaagc--agagaccagtggcaaattccttaacagacctgataataccacatccaaaaacagcagaagaaaatgttaagaatctttaaatacacagaactgtggcattgttaccccacagaagttggggtggagggga-cgcttaagtacagaatgggtaaaagctgggcgagaaactgattcctagtttccaagccacagagctacagccttttcctcgacatggccgaagctaggaggtttattctctagagagtgtaagaggggtctggaactaggggatgccagcacggatccagagaatgggcgccacactgaaaacaaaaggatgaagtgaccaca---tgctgtcatgctgaatgctgagtgcgaggagtcccagccttcttcccctactgggctcaaagatgcggccaggccaatccttcccgtcacataggaaggggccccttggg-taatctggcaaatctctgaagacctaaagagaccactgctgcgcttccccagtgaatagcccagctaga i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73225196 524 - 125196307 AAGTTGAAAAGC--AGAGACCAGTGGCAAATTCCTTAACAGACCTGATAACACCACATCCAAAAACAgcagaagaaaatgttaagaatctTTAAATACACAGAACTGTGGCATTGTTACCCCACAGAAGTTGAGGTGGAGGGGA-CGCTTAAGTGCGGAATGGGTAAAAGCTGGGCGAGAAACCGATTCCTAGTTTCCAAGCCACAGAGCTACAGCCTTTTCCTCGACATGGCCAAAGCTAGGAGGTTTATTCTCTAGAGAGTGTAAGAGAGGTCTGGAACTAGGGGATGCCAGCACGGATCCAGAGAATGGGCGCCACACTGAAAACAAAAGGATGAAGTGACCACA---TGCTGTCATGCTGAATGCTGAGTGCGAGGAGTCCCAGCCTTCTTCCCCTACTGGGCTCAAAGATGCGGCCAGGCCAATCCTTCCCGTCACATAGGAAGGGGCCCCTTGGG-TAATCTGGCAAATCTCTGAAGACCTAAAGAGACCACTGCTGCGCTTCCCCAGTGAATAGCCCAGCTAGA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72057211 524 - 125710982 aagttgaaaagc--agagaccagtggcaaattccttaacagacctggtaataccacatccaaaaccagcagaagaaaatgttaagaatctttaaatacacagaactgtggcattgttaccccacagaagttggggtggagggga-cgcttaagtacggaatgggtaaaagctgggcgagaaaccgattcctagtttccaagccacagagctacagccttttcctcgacatggccgaagctaggaggtttattctctagagagtgtaagagaggtttggaactaggggatgccagcacggatccagagaatgggcgccacactgaaaacaaaaggatgaagtgaccata---tgctggcatgctgaatgctgagtgccgggagtcccagccttcttcccctactgtgctcaaagatgcggccaggccgatccttcccgtcatataggaaggggcctcttgggataacctggcaaatctctg-agacctaaagagaccactgttgcgcttccccagtgaatagcccagctaga i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75515530 510 - 121768101 aagttgaaaagcagagagatcagtggcaaattccttagcagacctgagaataccacatccaaaaccagcagaggaaaatgctaagaatctttaaatgtacagaactgtggcattgttaccccatagacgttggggtacagggga-ggcttaagtatagaatgggtgaaagctgggtgagaaaccaatttctactttccaagctacggagacacag------------catggccaaagc---gaggtttcttctctagagagtataagagaggtgtggaacta-gggatgccagcacagatccagagaatgggcaccacactgaaaacgaaaggatgaagtgaccata---tgctgtcatgctggatgctgagtgcgaagagccccaaccttcttcccccacagggctcagagatgtggccaggctgatccttcccatcacatagaaggggctccttgggg-gaacttggcaaatccctgaagacctaacgagaccactgctgtgcttccccagtgaacagcccagccaga i calJac3.chr12 C 0 C 0 s canFam3.chr4 27683430 443 + 88276631 aaGATGAAAAGGAGACAGACCAGTGCCAAGTTATGTACCCGACCTGTGCCTGCCAAATCCTGAAACAT-----GAGAAAGCAAGGAATCCTGGAAAGCAAGGAACTGTGGCATTG-CGCCTTCTAGAACTTGAGGTGGAGAGAATGGCTTAAATGAGGAATTCAGGAAGGCCAGA-GAGAGACCTGTTTCTAGACTGGAAgctgcagggctcctgcatctcactcatgttgtcagaagtcaggaagttttctccctggagagtgtgagaga--------------ggatttctggacagag-cagaggattggtcccccactgaaaac---aggagtaaacggccttgtgctgctgccatattgaatgctgactgc--acagtgccagcctttccccaacaacggctgcacacctgctgccaggccaaccctcctggtc---------ggggcccaaagga--------------------------------------------ctcctccagggaat--------caga i canFam3.chr4 I 230 C 0 e mm10.chr14 24093499 39790 + 124902244 I a score=304775.000000 s hg38.chr10_KI270825v1_alt 24713 106 + 188315 ccatcctacagtgaaactcaaaagactcaaaagaccgcactctcacccatttgatctggacttttacatttcccaggcttcatc---agtcgacacccagtgattacct s panTro4.chr10 76395335 106 + 133524379 ccatcctacagtgaaactcaaaagactcaaaagaccgcactctcacccatttgatccggacttttacatttcccaggcttcatc---agtcaacacccagtgattacct i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76063025 109 - 133410057 ccatcctacagtgaaactcaaaagactcaaacgaccgcactctcactcatttgatctggacttttacatttcccaggcttcatcattagtcgacacccagtgattacct i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35005491 100 + 104879549 ccatcctacagtgaaactcaaaa---------gaccacactctcacccatttgatctggacttttacatttcccaggtttcatcattagtcgacacccagtgattacct i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73799207 109 - 130959383 ccatcctacagtgaaactcaaaagactcaaaagaccgcactctcacccatttgatctagacttttacatttcccaggcttcatcattagtcaacacccagtgattacct i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75361356 109 - 133195287 ccatcctacagtgaaactcaaaagactcaaaagaccgcactctcacccatttgatctagacttttacatttcccaggcttcatcattagtcaacacccagcgattacct i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73225720 109 - 125196307 CCATCCTACAGTGAAACTCAAAAGACTCAAAAGACCGCACTCTCACCCATTTGATCTAGACTTTTACATTTCCCAGGCTTCATCATTAGTCAATACCCAGTGATTACCT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72057735 109 - 125710982 ccatcctacagtgaaactcaaaagactcaaaagaccgcactctcacccatttgatctagacttttacatttcccaggcttcatcattagtcaacacccagtgattacct i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75516040 92 - 121768101 ccatcctacagtgaaactcaaaa---------gaccacacgcttacccatttgttctagacttttacatttcct--------tcattagtcaacatccaacgattattt i calJac3.chr12 C 0 C 0 e canFam3.chr4 27683873 0 + 88276631 C e mm10.chr14 24093499 39790 + 124902244 I a score=810826.000000 s hg38.chr10_KI270825v1_alt 24819 293 + 188315 gacacctgaagttaaaacctctaatgtgcaaaaccaagaccaaggcaaaaacaaacaaacaaacaaacaaacaaacaaaaaaaaacaaccttagaggaaatggaattat-------------gtg---ggatgaagaaaaaaaatactatcctcagataagatattgtattcatgaaacaagtacaggaagatata--------------------aaagagttcttggaaattaagaacttgttagcaaaactgaaaaactcaagagaagggactgaaggatgaaagttgagtgaatcgccacaaaataagagtaaaatgacaaaacg s panTro4.chr10 76395441 280 + 133524379 gacacctgaagttaaaacctataatgtgcaaaaccaagaccaaggcaaaa---------caaacaaacaaacaaacaaaaaa---caaccttagaggaaatggaattat-------------gtg---ggatgaagaaaaaaa-tactatcctcagataagatattgtattcatgaaacaagtacaggaagatata--------------------aaagagttcttggaaattaagaacttgttagcaaaactgaaaaactcaagagaagggactgaaggatgaaagttgagtgaatcgccacaaaataagagtaaaatgacaaaacg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76063134 262 - 133410057 gacacctgaagttaaaacctctaatgtgcaaaaccaagaccaaggcaaaa------------------------aaaaaaaa----aaccttagaggaattggaattat-------------gtg---ggatgaagaaaaaaa-tactaccctcagataagatattgtattcatgaaacaagtacaggaggatata--------------------aaagagttcttggaaattaaaaacttgttagcaaaactgaaaaactc--gagaagggactgaaggatgaaagttgagtgaatcgccacaaaataagagtaaaatgacaaaacg i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35005591 276 + 104879549 gacacctgaagttaaaacctctaatgtgcaaaaccaagaccaacgcaaaa------------aaaaaaaaaaaaaaaaaaaa----aaacttagaggaattggaattat-------------gtg---ggatgaagaaaaaaa-tactatcctcagataagatattgtattcacgaaacaagcacaggaagatata--------------------aaagagttcttggaaattaaaaacatgttagcaaaactgaaaaactcaagagaagggactgaaggatgaaagttgagtgaatcgccacaaaataagagtaaaatgacaaaacg i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73799316 277 - 130959383 gacacctgaggttaaagcctctcatgtgcaaaaccaagaccaaggcaaca------------aacaaaacaaaacaaaacaa----aaacttagaggaattggaattat-------------gtg---ggatgaagaaaaaatatactatcctcagataagatattgtattcatgaaacaagtacaggaagatata--------------------aaagagttcttggaaattaaaaacatgttagcaaaactgaaaaactcaatagaagggactgaaggatgaaagttgactgcatctccacaaaacaagagtaaaatgacaaaacg i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75361465 277 - 133195287 gacacctgaggttaaagcctctcatgtgcaaaaccaagaccaaggcaaca------------aacaaaacaaaacaaaacaa----aaacttagaggaattggaattat-------------gtg---ggatgaagaaaaaatatactatcctcagataagatattgtattcatgaaacaagtacaggaagatata--------------------aaagagttcttggaaattaaaaacatgttagcaaaactgaaaaactcaatagaagggactgaaggatgaaagttgactgcatctccacaaaataagagtaaaatgacaaaacg i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73225829 272 - 125196307 GACACCTGAGGTTAAAGCCTCTCATGTGCAAAACCAAGAccaaggcaa-----------------aaaacaaaacaaaacaa----aaacttagagGAATTGGAATTAC-------------GTg---ggatgaagaaaaaatatactaTCCTCAGATAAGATACTGTATTCATGAAACAAGTACAGGAAGATATA--------------------AAAGagttcttggaaattaaaaacatgttagCAAAACTGAAAAACTCAATAGAAGGGACTGAAGGATGAAAGTTGACTGCATCTCCACAAAATAAGAGTAAAATGACAAAACG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72057844 276 - 125710982 gacacctgaggttaaagcctctcatatgcaaaaccaagaacaaggcaaaa------------aacaaaacaaaacaaaacaa----aaacttagaggaattggaattat-------------ata---ggatgaagaaaaaaaatactatcctcaga-aagatattgcattcatgaaacaagtacaggaagatata--------------------aaagagttcttggaaattaaaaatatgttagcaaaactgaaaaactcaatagaagggactaaaggatgaaagttgactgtatctccacaaaataagagtaaaatgacaaaacg i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75516132 280 - 121768101 gacacctgaggttaaagcctctaatgtgcaaaaccaagaccaagggaaat------------aaaatcaatatgaaaaaaaa----aaacttagaggaattggaattggaaaaaaaaacttagag---ggatgaagaaaaaca-tactatcctcagataagatgctgtattcatgaaacaagtacaggaagatata--------------------aaagagttcttgaaaattaaaaacatgttagcaaaactg-aaaactcaacagacaagactgaaggatgaaagttgagtgaatcgccacaaaataagag--------caacaca i calJac3.chr12 C 0 C 0 s canFam3.chr4 27683873 283 + 88276631 gacacctgaggcccaatcctctgatgtgcaagactgagatcaggacaaat-------------------------tgggggt----gggggtggagaaattagatgtat-------------atgaaaggacaaaggaaaaaa--aaaatcttcagttaaaacatcacacccaggagacaaatacagaatgacacaaagatggacattcagagaataaagagttcttggaaattaaagacatgataccaaagatg-agaattcatcagagggcactgaagggtg-acgttgagtaaacctccatgaaggcacagtggaaggacagaatg i canFam3.chr4 C 0 I 196 e mm10.chr14 24093499 39790 + 124902244 I a score=1415308.000000 s hg38.chr10_KI270825v1_alt 25112 534 + 188315 acactggagtaaccaaaaaatgagggagctggcca---gatccaggggctcacgcctgtaatcccaacactttgggaggccaagatgggagaatcatgaggccaggagtttgagatcagcctggacaacacagtgagacccatttctacaaaaaa-tttaaaaattggctgggcttggtggcgtgtacctgtagtcctagctacttgggaggctgaggcgggaagatcgcttgagcccaggagttggaggctacagtgagctatgattgcacctctgcactccagcctgggtgacagaataagattctgtctcaaaaaaaaaaaaaaaagaaaagaaaagaaaaagagaagagaagag------aaaatgagggaactgtccaggatccccaacacataaataactgaagctccagaaagaacaggg-aaGTGG-CCTGCAG-CAGGTGCTCACGGCCCTTGCTGTTTTGGCTCTCTGGGTCTGCGTGTCCACCCCAGCCTCCAGCCTCCCAACCCATACATATCAATCCACACACAAGGATGAACA s panTro4.chr10 76395721 526 + 133524379 acactggagtaaccaaaaaacgagggagctggcca---gatccaggggctcacgcctgtaatcccaacactttgggaggccaagatgggagaatcatgaggccaggagtttgagaccagcctggacaacacagtgagacccatttctacaaaaaa-tttaaaaattggctgggcttggtggcttgtacctgtagtcctagctacttgggaggctgaggcgggaagatcgcttgagcccaggagttggaggctacagtgagctatgattgcacctctgcactccagcctgggtgacagaataagattctgtctcaaaaaaaaaaaaa--------gaaaagaaaaagagaagagaagag------aacatgagggaactgtccaggatccccaacacataaataactgaagctccagaaagaACAAGG-AAGTGG-CCTGCAG-CAGGTGCTCACGGCCCTTGCTGTTTTGGCTCTCTGGGTCTGTGTGTCCACCCCAGCCTCCAGCCTCCCAACCCATACATATCAATCCACACACAAGGATGAACA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76063396 530 - 133410057 acactggagcaaccaaaaaatgagggagctggccagacgacccaggggctcacgcctgtaatcccaacactttgggaggccaagatgggagaatcatgaggccaggagtttgagaccagcctggacaacacagtgagacccatttctacaaaaaa-tttaaaaattgtctgggcttggtggcgtgtacctgtagtcctagctacttgggaggctgaggtgggaggatcgcttgagcccaggagttggaggctacagggagctatgattgcacctttgcactccagcctgggtgacagaataagatcctgtctcaaaaaaaaaaaaa-------agaaaaagagaaaagaagagaagag------aaaatgagggaactgtccaggatccccaacacataaataactgaagctccagaaagaACACGG-AAGTAG-CCTGCAG-CAGGTGCTCACAGCCCTTGCTGTTTTGGCTCTCTGGGTCTGTGTGTCCACCCCAGCCTCCAGCCTCCCAACCCATACATACCAATCCACACACAAGGATGAACA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35005867 509 + 104879549 acactggagcaaccaaaaaatgagggagctggcca------------------------gatcccaacactttgggaggccaaggagggagaatcatgaggccaggagtttgagaccagcctggacaacacagtgagacccatttctacaaaaaa-tttaaaaattggctgggcttggtggcgtgtacctgtagtcctagctacttgggaggctgaggtgggaggatcgcttgagcccaggagttggaggctacagtgagctatgattgcacctctgcgctccagcctgggtgacagaataagatcctgtctcaaaaaaaaaaaaa-------agaaaaagaggagaggggaggggaggagagaaaaatgagggaactgtccaggatccccaacacataaataaatgaagctccagaaagaa---gg-aaGCGG-CCTGCAG-CAGGTGCTCACGGCCCTTGCTGTTTTGGCTCTCTGGGTCTGCGTGTCCACCCCAGCCTCCAGCCTCCCAACCCATACATACCGATCCACACACAAGGATGAACA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73799593 509 - 130959383 acactggagcaaccaaaaaatgagggagctggcta---gacccaggggctcacacctgtaatcctaacactttgggaggccaaggtgggagaatcatgaggccaggactttgagaccagcctggacaacatagtgagacccgtttctacaaaaca-tttaaaaactggctgggcgtggtagcgtgtacctgtagtcctagttccttgggaggctgaggtgggagactggcttgagcccaggagttgcaggctacagtgagctatgattgcaccactgcactccagcctgggtgacagaataagatcctgtctt-----------aa--------------aaaaaaaaaaaagaaaag------aaaactagggaactgtcccggatccccagcacataaataactgaagctccagaaacaagaggg-aaGCGG-TCTGCAG-CAGATGCCCACAGCCCTTGCTGTTTTGGCTCTCAGGGTCTGCGTGGCCACCCCAGCCTCCAGACTCCCAACCCAGACATAAAAATCCACACACCAGGATGAACA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75361742 512 - 133195287 acactggagcaatcaaaaaatgagggagctggcta---gacccaggggctcacacctgtaatcctaacactttgggaggccaaggtgggagaatcatgaggccaggactttgagaccagcctggacaacatagtgagacccgtttctacaaaaca-tttaaaaactggctgggcgtggtagcgtgtacctgtagtcctagttccttgggaggctgaggtgggagactcgcttgagcccaggagttgcaggctacagtgagctatgattgcaccactgcactccagcctgggtgacagaataagatcctgtctt--------aaaaa--------------aaaaaaaaaaaagaaaag------aaaacgagggaactgtcccggatccccagcacataaataactgaagctccagaaacaagaggg-aaGCGG-TCTGCAG-CAGATGCCCACAGCCCTTGCTGTTTTGGCTCTCAGGGTCTGCGTGGCCACCCCAGCCTCCAGACTCCCAACCCAGACATAAAAATCCACACACCAGGATGAACA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73226101 514 - 125196307 ACACTGGAGCAACCAAAAAATGAGGGAGCTGGCTA---GAcccaggggctcacacctgtaatcctaacactttgggaggccaaggtgggagaatcatgaggccaggactttgagaccagcctggacaacatagtgagacccgtttctacaaaaaa-tttaaaaactgactgggcgtggtagcgtgtacctgtagtcctagttccttgggaggctgaggtgggagactcgcttgagcccaggagttgcaggctacagtgagctatgattgcaccactgcactccagcctgggtgacagaataagatcctgtctt------aaaaaaa--------------aagaaaagaaaagaaaag------aaaacgaggGAACTGTCCCGGATCCCCAGCACATAAATAACTGAAGCTCCAGAAACAAGAGGG-AAGCGG-TCTGCAG-CAGATGCCCACAGGCCTTGCTGTTTTGGCTCTCAGGGTCTGCATGGCCACCCCAGCCTCCGGCCTTCCAACCCAGACATAAAAATCCACACACCAGGATGAACA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72058120 521 - 125710982 acactggagcaaccaaaaaatgagggagctggcca---gacccaggggctcacacctgtaatcccaacactttgggaggccaaggtgggagaatcacgaggccaggactttgagaccagcctggacaacatagtgagacccgtttatacaaaaaa-tttaaaaactggctgggtgtggtggcgtgtacctgtagttctagttccttgggaggctgaggcgggagactcgcttgagcccaggagttgcaggctacagtgagctatgattgcaccactgcactccagcctgggtgacagaataagatcctgtcttaaaaaaaaaaaaa--------------aagaaagaaaaagaaaag------aaaatgagggaactgtcccggatccccagcacataaataactgaagctccagaaacaagagggaaAGTGG-TCCGCAG-CAGATGCCCACAGCCCTTGCTGTTTTGGCTCTCAGGGTCTGCGTGGCCACCCCAGCCTCCGGCCTCCCAACCCAGACATAAAAATCCACACACCAGGATGAACC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75516412 505 - 121768101 acactggagcgaccaaaaaatgaggaaactggcca---gactcgggggcttacacctgtaatcccagcactctgggaggcgatggtgggcagatgatgaggtcgggagtttgagaccagcctggg-aacgtagtgagacccatttctaccaaaaattttaaaaattggctgggcgtggtgtcgtgtacccgtagtcctggctagctgggaggctggtatggggggagtgcttgagcccaggagttggaggctgaagtgaactatgattgcaccactgcactccatcat-ggtgacagaatgagaccctgtctt--------taaaa--------------aagaagaaaa--------------gaagtgaggaaattattcaggatgcctgacacataaagaactgaagctccagaaagaagagga-aaCCGGCCCCACAGTTAGGTGCTCACAGCCCTTGATGTTTTGGCTCTCGGGATCTGCGTGTCCACCCCAGCCTCCAGCCTCCCAACTCAGACGCAGCAATCCAGACACAAGGATGAACA i calJac3.chr12 C 0 C 0 e canFam3.chr4 27684156 196 + 88276631 I e mm10.chr14 24093499 39790 + 124902244 I a score=398038.000000 s hg38.chr10_KI270825v1_alt 25646 182 + 188315 CAGATTTTGCTAGtttctttgttttttgtttttgtttctgagatggagtctcgctctgttgcccaggctggagtgcagt-gcacgatctcggctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcccgagtagctgggactataggtgcctgccaccacacccg s panTro4.chr10 76396247 182 + 133524379 CAGATTTTGCTAGtttctttgttttttgtttttgtttctgagatggagtctcgctctgttgcccaggctggagtgcagt-gcacgatctcggctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcccgagtagctgagactataggtgcctgccaccacacccg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76063926 182 - 133410057 CAGACTTTGCTAGtttctttgttttttgtttttgtttttgagatggaatctcgctctgttgcccaggctggagtgcagt-gcacgatctcggctcactgcaagctccacctcccaggttcacaccattctcctgcctcagcctcccgagtagctgggactacaggcccctgccaccacacccg i ponAbe2.chr10 C 0 I 331 s nomLeu3.chr18 35006376 182 + 104879549 CAGACTTTGCTAGtttctttgttttttgtttttgtttttgagatggagtctcgctctgttgcccaggctggagtgcagt-gcatgatcttggctcactgcaagctccgcctcccgggttcacaccactctcctgcctcagccttctgagtagctgggactacaggcgcctgccaccacacctg i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73800102 176 - 130959383 ---ACTTTGCTAGttt----tttgtttgtttgcttttttgagatggagtcttgctctgtcacccaggctggagtgcagtagcacgatctcagctcactgcaagctctgcctcctgggtttactccattctcctgcgtcagcctcccgagtagctgggactacaggcgcctgccaccacacccg i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75362254 177 - 133195287 --GACTTTGCTAGttt----tttgtttgtttgcttttttgagatggagtcttgctctgtcacccaggctggagtgcagtagcacgatctcagctcactgcaagctctgcctcctgggtttactccattctcctgcgtcagcctcccgagtagctgggactacaggcgcctgccaccacacccg i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73226615 181 - 125196307 --GACtttgctagttttttgtttgtttgtttgcttttttgagacggagtcttgctctgtcatccaggctggagtgcagtagcacgatctcagctcaccgcaagctctgactcctgggttcgctccattctcctgcgtcagcctcccgagtagctgggactacaggcacctgccaccacacccg i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72058641 177 - 125710982 --GACTTTGCTAGttt----tttgtttgtttgcttttttgagacggagtcttgctctgtcacccaggctggagtgcagtagcatgatctcagctcactgcaagctctgcctcctgggttcactccattctcctgcgtcagcctcccgagtagctgggactacaggcgcctgccaccacacccg i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27684156 196 + 88276631 I e mm10.chr14 24093499 39790 + 124902244 I e calJac3.chr12 75516917 0 - 121768101 C a score=307184.000000 s hg38.chr10_KI270825v1_alt 25828 136 + 188315 atcaaatttttggatttttagtagagacagggttgc-accgtgttaatcaggatagtctcgatctcctgaccttgtgatctgcccgcctcagcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggc s panTro4.chr10 76396429 136 + 133524379 gtcaaatttttggatttttagtagagacagggttgc-accgtgttaatcaggatagtctcgatctcctgaccttgtgatccgcccgcctcagcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76064439 136 - 133410057 ggtaaatttttggaatctcagtaaagacagggttgc-accgtgttaatcaggatagtcttgatctcttgacctcatgatccgcccgcctcagcctcccaaagtgctgggattacaggcgtgagccatcgcgcctggc i ponAbe2.chr10 I 331 C 0 s nomLeu3.chr18 35006558 137 + 104879549 gctaaatttttggatttttagtagagacagggttacaactgtattaatcagcatagtctcaatctcctgacctcgtgatccgcccgcctcagcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggc i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73800278 136 - 130959383 gctaattttttgtatttttagtagagacagggtttc-atcgtgttagccaggacagtctcgatctcctgaccttgtgatctgcctgcctcggcccctcaaagtgctgggattacaggcgtgagccaccgcgcccagc i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75362431 136 - 133195287 gctaattttttgtatttttagtagagacggggtttc-atcgtgttagccaggacagtctcgatctcctgaccttgtgatctgcctgcctcggcccctcaaagtgctgggattacaggcgtgagccaccgcgcccagc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73226796 136 - 125196307 gctaattttttgtatttttagtagagacggggtttc-atcgtgttagccaggacagtctcgatctcctgaccttgtgatctgcctgcctcggcccctcaaagtcctgggattacaggcgtgagccaccgcgcccagc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72058818 136 - 125710982 gctaattttttgtatttttagtagagacggggtttc-atcgtgttagccaggacagtctcgatctcctgaccttgtgatctgcctgcctcggcccctcaaagtgctgggattacaggcgtgagccaccacgcccagc i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27684156 196 + 88276631 I e mm10.chr14 24093499 39790 + 124902244 I e calJac3.chr12 75516917 0 - 121768101 C a score=16614.000000 s hg38.chr10_KI270825v1_alt 25964 8 + 188315 cAGACTTT s panTro4.chr10 76396565 8 + 133524379 cAGACTTT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76064575 8 - 133410057 cAGACTTT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35006695 8 + 104879549 cAGACTTT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73800414 8 - 130959383 cACACTTC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75362567 8 - 133195287 cACACTTC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73226932 8 - 125196307 cacactTC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72058954 8 - 125710982 cACACTTC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75516917 7 - 121768101 CAGACTT- i calJac3.chr12 C 0 C 0 e canFam3.chr4 27684156 196 + 88276631 I e mm10.chr14 24093499 39790 + 124902244 I a score=1921015.000000 s hg38.chr10_KI270825v1_alt 25972 641 + 188315 GCTAGTTTTTACTTCATCCAGCCCTGTTCAAGAAGATGATGCATAGGAGAAGATAAACCCAGTG----ACCCTCCTGTGGATTAAGAATTCAGATCCGAGGCTAAGCCTTTCTCCT--CAAGTGTTTCCTCACAGGAAACAGATCCATCGAAG---GAGAGGAGGACAGGAAAATCAA---AAGAAGTCAACATTCCCAGGAGATTCTCAGCAAAATAGAGGAGAGGTGTCAAGATGAGAGCTGGCACCAGACCCCGAGGGCAGTGATTCTGGCCTGGAGCAAGGATTCAGGACAGACACGTCAGGAGCCCTCAGCACCAAGATCCCTGCGGGCTTCCCGCAGCTCAGCTGAGGA-------CAGGTCACCCGGGCGATCCCATTCACATTCTTT----CTACTCGGCTTACCTTGACATGA-TGGAGAAGCTTCCTGCCCTCCAGATCAGCTGAAGATCCTCACTCCATCCCACAGCAGCGCTCGGCTTTGACGTCCTCCCGAAATCAAAAGGTCAGCTGTGGGGACTAC--AAAAACAGAACTCAGCAGCCGGCACCCTCCATCCACATTCTTGCCAGATGATCAGGGTCTGGTCCATGGATAGTGTGGCCACGGGCCCTGATGGTGGCAGCCCTGCTACGCCCAGGACTCATTCAAG-CCTTGCT s panTro4.chr10 76396573 641 + 133524379 GCTAGTTTTTACTTCATCCAGCCCTGTTCAAGAAGATGATGCATAGGAGAAGATAAACCCAGTG----ACCCTCCTGTGGATTAAGAATTCAGATCCGAGGCTAAGCCTTTCTCCT--CAAGTGTTTCCTCACAGGAAACAGATCCATCGAAG---GAGAGGAGGACAGGAAAATCAA---AAGAAGTCAACATTCCCaggagattctcagcaaaatagaggagaggtgtcaagatgagagctggcaccagaccccgagggcagtgattctggcctggagcaaggattcaggacagacaggtcaggagCCCTCAGCACCAAGATCCCTGCGGGCTTCCCGCAGCTCAGCTGAGGA-------CAGGTCAACCGGGCGATCCCATTCACATTCTTT----CTACTCGGCTTACCTTGACATGA-TGGAGAAGCTTCCTGCCCTCCAGATCAGCTGAAGATCCTCACTCCATCCCACAGCAGCGCTCGGCTTTGACATCCTCCCGAAATCAAAAGGTCAGCTGTGGGGACTAC--AAAAACAGAACTCAGCAGCCGGCACCCTCCATCCACATTCTTGCCAGATGATCAGGGTCTGGTCCATGGATAGTGTGGCCACAGGCCCTGATGGTGGCAGCCCTGCTACGCCCAGGACTCATTCAAG-CCTTGCT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76064583 643 - 133410057 GCTAG-TTTTACTTCATCCAGCCCTGTTCAAGATGATGATACATAGGAGAAGATAAACCCAGTG----ACCCTCCTGTGGATTAAGAACTCAGATCCGAGGCTAAGCCTTTCTCCT--CAAGTGTTTCCTCACAGGAAACAGATCCatcgaag---gagaggaggacaggaaaatcaaaagaagaagtcaacattcccaggagattctcagcaaaatagaggagagatgtcaagatgagagctggcaccagaccccgagggcagtgattctggtctggagcaaggattcaggacagacacgtcaggagCCGTTAGCACCAAGATCCCTGCGGGCTTCCCGCAGCTCAGCTGAGGA-------CAGGTCACCCGGGTGATCCCATTCACATTCTTT----CTACTCGGCTTACCTTGACATGA-TGGAGAAGCTTCCTGCCCTCCAGATCAGCTGCAGATCCTCACTCCATCCCACAGCAGTGCTCGGCTTTGACATCCTCCTGAAATCGAAAGGTCAGCTGTGGGGACTAC--AAAAACAGAACCCAGCAGCCGGCACCCTCCATCCACATTCTTGCCAGATGATCACGGTCTGGTCCATGGATAGTGTGGCCACAGGCCCTGATGGTGGCAGCCCTGTTACACCCAGGACTCAATCAAG-ACTTACT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35006703 644 + 104879549 GCTAGTTTTTACTTCATCCAGCCCTGTTCAAGAAGATGATGCATAGGAGAAGATAAACCCAGTG----ACCCTCCTGTGGATTAAGAATTCAGATCCGAGGCTAAGCCTTTCTCCT--CAAGTGTTTCCTCACAGGAAGCAGATGCATCGAAG---GAGAGGAGGATAGGAAAATCAAAAGAAGAAGTCAACATTCCCaggagattctcagcaaaatagaggagaggtgtcaagatgagagctggcaccagaccctgagggcagtgattctggtctggagcaaggattcaggacagaCACATCAGGAGCCGTCACCACCAAGATCCCTGCGGGCTTCCTGCAGCTCAGCTGAGGA-------CAGGTCGCCCAGGTGATCCCATCCACATTCTTT----CTACTTGGCTTACCTTGACATGA-TGGAGAAGCTTCCTGCCCTCCAGATCAGCTGCAGATCCTCACTCCATCCCACAGCAGTGCTCGGCTTTGACGTCCTCCCCAAATCGAAAGGTCAGCTGTGGGGACTAC--AAAAACAGAGCTCAGCAGCCAGCACCCTCCATCCACATTCTTGCCAGATGATCAGGGTCTGGTTCACGGATAGTGTGGCCACAGGCCCTGATGGTGGCAGCCCTGCTACTCCCAGGACTCATTCAAG-CCTTCCT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73800422 619 - 130959383 GCTAGTTTTTACTTCGTCCAGCCCTGTTCAAGAAGAAGATGCATAGGAGAAGATAAGCCCAGGG----ACCCTCCTGTGGAGAAAGAATTCAGATCCGTGGCTAAGCTTTTCTCCT--CAAGTGTTTCCTCACAGGAAACAGGTTCATCGAAG---GAGAGGAAGACAGGAAAATCAA---AAGAAGTCAACATTCC-----------CAGAAAAATAGAGAAGAGGTGTCAA---GACAGCTGGCACCAGACCCCGAAGGCAGTGATTCTGGTCTGGAGCAAGGATTCAGGACAGACACGTCAGGAGCCACTGGCACCAAGATCTCTGCGGGCTTCCTGCAGCTCAGCTGAAGA-------CAGGTTGCCCAGGTGATCCCATCCACATTCCTT----CTACTCGGCTTATCTGGACATGA-TGGAAAAGCTTCCCGCCCTCCAGATCAGCTGCAG-TCCTCAATCCATCCCACAGCAGTGCTCGGCTTTGACTTCCTCCTGAAATCGAAAGGTCAGCTGTGGGGACTGC--AAAAACAGAACTCGGCAGCCGGCACCCTCCATCCACATTCTTGCCAGATGATCAGGGTCTCATCCATGGATAGGGC-------GGCCCTGATGGTGGCAGCCCTGCTACACCCAGGACTCATTCAAG-CCTTGCT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75362575 619 - 133195287 GCTAGTTTTTACTTCGTCCGGCCCTGTTCAAGAAGAAGATGCATAGGAGAAGATAAGCCCAGGG----ACCCTCCTGTGGAGAAAGAATTCAGATCCGTGGCTAAGCTTTTCTCCT--CAAGTGTTTCCTCACAGGAAACAGGTTCATTGAAG---GAGAGGAAGACAGGAAAATCAA---AAGAAGTCAACATTCC-----------CAGAAAAATAGAGAAGAGGTGTCAA---GACAGCTGGCACCAGACCCCGAAGGCAGTGATTCTGGTCTGGAGCAAGGATTCAGGACAGACACGTCAGGAGCCACTGGCACCAAGATCTCTGCGGGCTTCCTGCAGCTCAGCTGAAGA-------CAGGTTGCCCAGGTGATCCCATCCACATTCCTT----CTACTCGGCTTATCTGGACATGA-TGGAAAAGCTTCCCGCCCTCCAGATCAGCTGCAG-TCCTCAATCCATCCCACAGCAGTGCTCGGCTTTGACTTCCTCCTGAAATCGAAAGGTCAGCTGTGGGGACTGC--AAAAACAGAACTCGGCAGCCGGCACCCTCCATCCACATTCTTGCCAGATGATCAGGGTCTCGTCCATGGATAGGGC-------GGCCCTGATGGTGGCAGCCCTGCTACACCCAGGACTCATTCAAG-CCTTGCT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73226940 627 - 125196307 GCTAGTTTTTGCTTCATCCAGCCCTGTTC---AAGAAGATGCATAGAAGAAGATAAGCCCAGGG----ACTCTCCTGTGGAGAAAGAATTCAGATCCGTGGCTAAGCTTTTCTCCT--CAAGTGTTTCCTCACAGGAAACAGGTTCATTGAag---gagaggaagacaggaaaatcaA---AAGAAGTCAACATTCCCAGGAGATTctcagaaaaatagagaagaggTGTCAAGATGACAGCTGGTACCAGACCCCGAAGGCAGTGATTCTGGTCTGGAGCAAGGATTCAGGACAGACACGTCAGGAGCCACTGGCACCAAGATCTCTGCGGGCTTCCTGCAGCTCAGCTGAAGA-------CAGGTTGCCCAGGTGATCCCATCCACATTCTTT----CTACTCGGCTTATCTGGACATGA-TGGAAAAGCTTCCCGCCCTCCAGATCAGCTGCAT-TCCTCAATCCATCCCACAGCTGTGCTCGGCTTTGACTTCCTCCTGAAATCGAAAGGTCAGCTGTGGGGACTGC--AAAAACAGAACTCAGCAGCCGGCACCCTCCATCCACATTCTTGCCAGATGATCAGGGTCTCGTCCATGGATAGGGC-------GGCCCTGATGGTGGCAGCCCTGCTACACCCAGGACTCATTCAAG-CCT---T i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72058962 632 - 125710982 GCTAGTTTTTACTTTGTCCAGCCCTGTTCAAGAAGAAGATGCATAGGAGAAGATAAGCCCAGGG----ACCCTCCTGTGGAGAAAGAATTCAGATCCGTGGCTAAGCTTTTCTCCT--CAAGTGTTTCCTCACAGGAAACAGGTTCATCGAAG---GAGAGGAAGACAGAAAAATCAA---AAGAAGTCAACATTCCCaggagattctcagaaaaatagagaagaggtgtcaagatgacagctggcaccagaccccgaaggcagtgattctggtctggagcaaggattcaggacagacacgtcaggagCCACTGGCACCAAGATCTCTGCGGGCTTCCCGCAGCTCAGCTGAAGA-------CAGGTTGCCCAGGTGATCCCATCCACATTCTTT----CTACTCGGCTTATCTGGACATGA-TGGAAAAGTTTCCCGCCCTCCAGATCAGCTGCAG-TCCTCAATCCATCCCACAGCAGTGCTCAGCTTCGACTTCCTCCTGAAATCGAAAGGTCAGCTGT-GGGACTGC--AAAAACAGAACTCAGCAGCCGGCACCCTCCATCCACATTCTTGCCAGATGATCAGGGTCTCGTCCATGGATAGGGC-------GGCCCTGATGGTGGCAGCCCTGCTACACCCAGGACTCATTCAAG-CCTTGCT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75516924 633 - 121768101 GCTAGTTTTCACTGCATCCAGCCCTGTTCTAGACGATGATAC-TAGGAGAAGGTAAACCCAGTG----ATCCTCTCGTGGAGAAAGAATTCAGATTCGAGGCTAAGCCTTTCTCCT--CAAGGATTTCCTCAGAGGAAATAGATCCCTCAAAG---GAGAGGAGGACAGAAAAA--GG---AAGAAGGCAACATTCCCAGGAGATTCTCAGCAAATTACAGGACAGGTGTCAAGACGAGAGCTGGCCCCAGACTCCAAGGGCAGTGAATCCAGCCTGGAGCAGGGATTCAGGACAGACACATCGGGAGCTGTCAGCACCAAGATCCCCATGGGCTTTCCACAGGTCAGCTGAGGA-------CAGGTCGCCTGGGTGATCCCATCCACATTCTTT----CTACTTGGCTTATCTTGACACGA-TAGAGGAGCTTCCTGCCTTCCAAATCAGCTGCAGAACCTCACTCCATCCCACAGCAGTGCTCAGCTTTGACTTCCTCCCAAAATTGAGAGGTCAGCTGTGGGGACTGCAAAAAAACAGAACTCGGCAGCAGGCGACCTCCATCCACATTCTTGCTAGATGATCAGG------TCCATGGACAGTGCGGTCACAGGTCCGGATGGTGGCAGCCCCG-GAAGCCCAGGACGCATTCAAG-CCTTGCT i calJac3.chr12 C 0 C 0 s canFam3.chr4 27684352 580 + 88276631 GCTCCTTTTTTCTTAATGCAGAACTTTTCTCGAAGACAGTGT-TGGGAGAAGGTAAACCAAGTAAGTCATCCTCCTGGGGAGAAAGCATTCCCAACAGGGATTGAGAATTTCCCCTCACAAGTG-----GCACAGGATGCAGGACAGCCAAAGAGAGAGAGGAGAACCAAAGAA--AG---AAATGGTGAAAATCCC-----------CAGGAAACTGG-----------------GAGAGCTGCTGCCAGACTTCATGAGCAACAAGTCTGCTTTGGGGCAGGGACTTGAGACGGAGACGCGAAGGGCTGTTAGCACCAGGCTCTCT---GGCTTGGTGTGGCTCAGCAAGAGGAAAACATCAAGTGACCCTGGTG--------CACATTCTTCATTGCCACTCAGCTTGTCTTGACGTGAGCTGACAAGCTTCCTGCTCTCCAGACCGG-----------CGCTCCATCCCAGGGAAGCGT----CCTTGGCTTGCTGGCAGAGTCCAGATGAT-GCTGTAGTCAGCGT--GCAAATGGACAAGAGCAGCCCAAGCCCTCTGACCACGTTTCTGCCAGACATTGAGGACCTGGTGTGTG--------------------TGACAGCAGTGGCCTCGATGCCCCCAGCACCTGTGCCAGTCCTTGCT i canFam3.chr4 I 196 I 97 e mm10.chr14 24093499 39790 + 124902244 I a score=2768708.000000 s hg38.chr10_KI270825v1_alt 26613 954 + 188315 GCTCCCTGGCTTCCCCAGAAGGGCCCCTTGTAAATTCTTGGAGAAGCTGAAGTCCACTCTGACCTTGAGATCACATTATGTTCTCCAGCAGACTTCATTCAACATTGGAAACACTGTGCTTTCCCCACACAGCTAATCTGTGCTTGATGCTCAATGTTTTTAAAAATGAACAGTATGTgaagagcaaggaaattattcactacaggtcaggctagcacttactttggtagagagggtggggcattcaaccgggtgaagacatacgagtgcttctaaggtagttggtagtgttctgttccttaaagatggaaacactatccattttactctttaaactatacatttatggccaggcacagtggctcatgcctgtaatcccagcacttggggaggctagggtgggaggactgtttg----agcccaggagttcaaaaccagcctgggcaacatagcaagatcccatctctaCTTA-----ATAACAAAACTATACACTTATATTGGATATGC------------------------TCTTCTCTATGGATGACATCTTTCACAGTT-GGGGAGAAAAAGAGATAAAAACACATAGTAATAGGGAGAACTAAAGGGGAACCATCAGGAGGCCAGAGACTATATTCTACAAAGGGAGAGCAAATGAAAGAGTATGGACGGACAAGAGAAGGGTGAGGGAACCCACAGGCCAGAAAAGTAGCAGAAGGGGGCAGTACAGAAGGCCCACCCACCCTGG------------AGCCCCCATCTGCTGA----------------------------------------------------------------GAGGTCCACCGTTCCCACGCCAGCACGTGCACCCTTGTCTGCGGTTTATGTTCACTCTGCATCCCTTCCTGTACTTCACGTTTCTCTTCATCTTTGACATCATGACCCTTGTGGCCCTGTGTCTCATCAACCCCACAGGAGGTGGCAGCTCGGCTTCCC----CAAGCCTCTGGTTAGCCCACTGCTGTTGAGCCTCAAAGCTTTGTCTTGGCTGGAAAGAAAG s panTro4.chr10 76397214 958 + 133524379 GCTCCCTGGCTTCCCCAGAAGGGCCCCTTGTAAATTCTTGGAGAAGCTGAGGTCCACTCTGACCTTGAGATCACATTATGTTCTCCAGCAGACTTCATTCAACATTGGAAACACTGTGCTTTCCCCACACAGCTAATCTGTGCTTGATGCTCAATGTTTTTAAAAATGAACAATATGTgaagagcaaggaaattattcactacaggtcaggctagcacttactttggtagagagggtggggcattcaaccgggtgaagacatatgaatgcttctaaggtagttggtagtgttctgttccttaaagatggaaacactatccattttactctttaaactatgcatttatggccaggcacagtggctcatgcctgtaatcccagcacttggggaggctaaggtgggaggactgtttgtttgagcccaggagctcaaaaccagcctgggcaacatagcaagatcccatctctactta-----ataacaaaactatacacttatattggatatgc------------------------tcttctctatggatgacatctttcacagtt-ggggaaaaaaagagataaaaaCACATAGTAATAGGGAGAACTAAACGGGAACCATTAGGAGGCCAGAGACTATATTCTACAAAGGGAGAGCAAATGAAAGAGTATGGACGGACAAGAGAAGGGTGAGGGAACCCACAGGCCAGAAAAGTAGCAGAAGGGAGCAGTACAGAAGGCCCACCCGCCCTGG------------AGCCCCCATCTGCTGA----------------------------------------------------------------GAGGTCCACCGTTCCCATGCCAGCACGTGCACCCTTGTCTGCGGTTTATGTTCACTCTGCATCCCTTCCTGTACTTCACGTTTCTCTTCATCTTTGACATCATGACCCTTGTGGCCCTGTGTCTCATCAACCCCACAGGAGGTGGCAGCTCGGCTTCCC----CAAGCCTCTGGTTAGCCCACTGCTGTTGAGCCTCAAAGCTTTGTCTTGGCTGGAAAGAAAG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76065226 950 - 133410057 GCTCCCTGGCTTCCCCAGAAGGGCCCCTTGTAAATTCTTCGGGAAGCTGAGGTCCACTCTGACCTTGAGATCACGTTACGTTCTCCAGCAGACTTCATTCAACATTGGAAACACTGTGCTTTCCCCACACAGCTAATCTGTGCTTGATGCTCAAAGTTTTTAAAACTGAACAATATGTgaagagcaaggaaattattaactacaggtcaggctagcacttactttggtagacagggtggggcattcaactgggtgaagacatacgagtgcttctaaggtag-tagtagtgttttgttccttaaagatggaaacactatccattttactctttaaactatacatttatggccaggcacggtggctcatgcctgtaatcccagcacttggggaggctaaggtgggaggattgtttg----agcccaggagttcaagaccagcctgggcaacatagcaagatcccatctctacTTA-----ATAACAAAACTATACACTTATATTGGATATGC------------------------TCTTCTCTATGTATGACATCTTTCACAGTT-GGGGGAAAAAAAAGATAAAAACACATAGTAATAGGGAGAACTAAAGGGGAACCATTAGGAGGCCAGAGACTATATTCTACAAAGGGAGAGCAAATGAAAGAGTATGGACAGACAAAAGAAGTCTGAGGGAACCCACATGCCAGAAAAGTAGCAGAAGGGGGCAGTACAGAAGGCCCGCCTACCCTGG------------AGCCCCCATCCACTGA----------------------------------------------------------------GAGGTCCACCATTCCCACGCCAGCACATGCACCCTTGTCTGCGGTTTATGTTCACTCTGCATCCCTTCCTGTACTTCACGTTTCTCTTCATCCTTGACATCATGACCCTTGTGGCCCTGTGTCTCATCAACCCCACAGGAGGTGGCAGCTCGGCTTCCC----CAAGCCTCTAGTTAGCCCACTGC---TGAGCCTCAAAGCTTTGTCTTGGCTGGAAAGAAAG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35007347 945 + 104879549 GCTCCCTGGCTTCCCCAGAAGGGCCCCTTGTAAATTTTTGGGGAAGCTGAGGTCCACTCTGACCTTGAGATCACATTACGTTCTCCAGCAGACTTCATTCAACATTGGAAACACTGTGCTTTCCCCACCCAGCTAATCTGCGCTTGATGCTCAATGTTTTTAAAACTGAACAATATGTgaagagcaaggaaattattaattacaggtcaggctagcacttactttggtggagagggtggggcattcaactgggtgaagacatatgagtgcttctaaggtag-------tgttctgttccttaaagagggaaacactatccattttactctttcaactatacatttatggccagacacagtggctcatgcctgtaatcccagcacttggggaggctaaggtgggaggattgtttg----agcccaggagttcaagaccagcctgggcaacatagcaagatcccatctctactta-----acaacaaaactatacacttacattggatatgc------------------------tcttctctatgtatgacatctttcacagtt-gggggaaaaaa-agataaaaaCACATAGTAATAGGGAGAACTAAAGGGGAACCATTAGGAGGCCAGAGACTATATTCTACAAAGGGAGAGCAAATGAAAGAGTATGGACAGACAAGAGAAGGCTGAGGGAACCCACAGGCCAGAAAAGTAGCAGAAGGAGGCAGTACAGAAGGCCCGCCCGCCCTAG------------AGCCCCCATCCACTGA----------------------------------------------------------------GAGGTCCACCGTTCCCACACCAGCACGTGCACCCTTGTCTGCGGTTCATGTTCACTCTGCATCCCTTCCTGTACTTCACGTTTCTCTTCATCCTTGACATCTTGACCCTTGTGGCCCTGTGTCTCATCAACCCCACAGGAGGTGGCAGCTTGGC-TCTC----CAAGCCTCTGGTTAGCCCACTGCTGTTGAGCCTCAAAGCTTTGTCTTGGCTGGAAAGAAAG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73801041 1020 - 130959383 GCTCCCTGGCTTCCCCAGAAGGGCCCCTCGTAAATTCTGGGGGAAGCTGAGGTCCACTCTGACCTTGAGATCACATTACGTTCTCCAGAGGACTTCATTCAACTTTGGGAACATGGTGCTTTCCCCACACAGCTAATCTGTGCTTCATGCTCAATGTTTTTAAAACCGAACAATATGTgaagagcaaggaaattattaactacaggtcaggctagcgcttactttggtggagggcgtggggcattcaactgggtgaaggcatacgagtgcttctaaggtag-tggtagtgttctgctccttaaagatagaaacactatccatttttctctttaaactatacatttatggccaggcacagtggctcatgcctgtaatcccagcacttggggaggctaaggtgggaggattgcttg----agcccaggagttcaagaccagcctgggcaacatagcaagatcccatctctactta-----aaagcaaaactatacatttatattggatatgc------------------------tcttctctaggtatgacatctttcacagtt-gggggaaaaaaaagataaaaaCACACAGTAATAGGGAAAACTAAAGGGGAACCATCAGGACTCCAGAGACTATATTCTATAAAGGGAGAGCAAATGAAATAGTATGGACAGACAAGAGAAGGCTGAGGGAAGCCACAGGCCAGAAAAGTAGCAGAAGG-GGCAGTACAGAAGGTCCGCCCGCCATAG------------AGCCCCCATCCGCTGAGGTCCACCATTCACACATGAGCACGTGCGCCCTTGTCTGTACCGCCATAGAGCCCCCATCCGCTGGGGTCCACCATTCACACACAAGCACGTGCGCCCTTGTCTGCAGTTTATGTTCACTCTGCATCCCTTCCTGTACTTCACGTTTCTCTTCATCCTTGACATCATGACTCTTGTGGCCCTGTGTCTCATCAACCCCACAGGAGGCGGCAGCTCAGCTTCCTGGAGCAAGCCTCTGGTTAGTCCACTGCTGTTGAGCCTCAAAGCTTTGTCTCTGCTGGAAAGAAAG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75363194 955 - 133195287 GCTCCCTGGCTTCCCCAGAAGGGCCCCTCGTAAATTCTGGGGGAAGCTGAGGTCCACTCTGACCTTGAGATCACATTACGTTCTCCAGAGGACTTCATTCAACTTTGGGAACATGGTGCTTTCCCCACACAGCTAATCTGTGCTTCATGCTCAATGTTTTTAAAACCGAACAATATGTgaagagcaaggaaattattaactacaggtcaggctagcgcttactttggtggagggcgtggggcattcaactgggtgaaggcatacgagtgcttctaaggtag-tggtagtgttctgctccttaaagatggaaacactatccatttttctctttaaactatacatttatggccaggcacagtggctcatgcctgtaatcccagcacttggggaggctaaggtgggaggattgcttg----agcccaggagttcaagaccagcctgggcaacatagcaagatcccatctctactta-----aaagcaaaactatacatttatattggatatgc------------------------tcttctctaggtatgacatctttcacagttggggggaaaaaaaagataaaaaCACACAGTAATAGGGAAAACTAAAGGGGAACCATCAGGACTCCAGAGACTATATTCTATAAAGGGAGAGCAAATGAAATAGTATGGACAGACAAGAGAAGGCTGAGGGAAGCCACAGGCCAGAAAAGTAGCAGAAGG-GGCAGTACAGAAGGTCCGCCCGCCATAG------------AGCCCCCATCCGCTGA------------------------------------------------------------------GGTCCACCATTCACACACGAGCACGTGCGCCCTTGTCTGCAGTTTATGTTCACTCTGCATCCCTTCCTGTACTTCACGTTTCTCTTCATCCTTGACATCATGACTCTTGTGGCCCTGTGTCTCATCAACCCCACAGGAGGCGGCAGCTCAGCTTCCTGGAGCAAGCCTCTGGTTAGTCCACTGCTGTTGAGCCTCAAAGCTTTGTCTCTGCTGGAAAGAAAG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73227567 955 - 125196307 GCTCCCTGGCTTCCCCAGAAGGGCCCCTCGTAAATTCTGGGGAAAGCTGAGGTCCACTCTGACCTTGAGATCACATTACGTTCTCCAGCAGACTTCATCCAACTTTGGGAACATGGTGCTTTCCCCACACAGCTAATCTGTGCTTCATGCTCAATGTTTTTAAAACCGAACAATATGTGAAGAGCAAGGAAATTATTAACTACAGGTCAGGCTAGCGCTTACTTTGGTGGAGAGCGTGGGGCATTCAACTGGGTGAAGGCATACGAGTGCTTCTAAGGTAG-TGGTAGTGTTCTGCTCCTTAAAGATGGAAACACtatccatttttctctttaaactatacatttatggccaggcacagtggctaatgcctgtaatcccagcacttggggaggctaaggtgggaggattgcttg----ggcccaggagttcaagaccagcctgggcaacatagcaagatcccatctctactta-----aaagcAAAACTATACATTCATATTGGATATGC------------------------TCTTCTCTAGGTATGACATCTTTCacagttgggggaaaaaaaaagataaaaacacacaGTAATAGGGAAAACTAAAGGGGAACCATCAGGACTCCAGAGACTATATTCTATAAAGGGAGAGCAAATGAAATAGTATGGACAGACAAGAGAAGGCTGAGGGAAGCCACAGGCCAGAAAAGTAGCAGAAGG-GGCAGTACAGAAGGTCCGCCCGCCATAG------------AGCCCCCATCCGCTGA------------------------------------------------------------------GGTCCACCATTCACACACGAGCACGTGCGCCCTTGTCTGCAGTTTATGTTCACTCTGCATCCCTTCCTGTACTTCATGTTTCTCTTCATCCTTGACATCATGACTCTTGTGGCCCTGTGTCTCATCAACGCCACAGGAGGCAGCAGCTCAGCTTCCTGGAGCAAGCCTCTGGTTAGTCCACTGCTGTTGAGCCTCAAAGCTTTGTCTCTGCTGGAAAGAAAG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72059594 953 - 125710982 GCTCCCTGGCTTCCCCAGAAGGGCCCCTCGTAAATTCTGGGGAAAGCTGAGGTCCACTCTGACCTTGAGATCACATTACGTTCTCCAGCAGACTTCATTCAACTTTGGGAACACTGTGCTTTCCCCACACAGCTAATCTGTGCTTCATGCTCAATGTTTTTAAAACCGAACAATATGTgaagagcaaggaaattattaactacaggtcaggctagcacttactttggtggagagtgtggggcattcaactgggtgaaggcatacgagtgcttctaaggtgg-tggtagtgttctgctccttaaagatggaaacactatccatttttctctttaaactatacatttatggccaggcacagtggctcatgcctgtaatcccagcacttggggaggctaaggtgggaggattgcttg----agcccaggagttcaagaccagcctgggcaacatagcaagatcccatctctactta-----aaagcaaaactatacatttatattggagatgc------------------------tcttctctaggtatgacatctttcacagtt-ggggaaaaaaacagataaaaaCACACAGTAATAGGGAAAACTAAAGGGGAACCATCAGGACCCCAGAGACTATATTCTATAAAGGGAGAGCAAATGAAATAGTATGGACAGACAAGAGAAGGCTGAGGGAACCCACAGGCCAGAAAAGTCGCAGAAGG-GGCAGTACAGAAGGTCCACCCGCCATAG------------AGCCCCCATCCGCTGA------------------------------------------------------------------GGTCCACCATTCACACATGAGCACGTGCGCCCTTGTCTGCAATTTATGTTCA-TCTGCATCCCTTCCTGTACTTCACGTTTCTCTTCATCCTTGACATCATGACTCTTGTGGCCCTGTATCTCATCAACCCCACAGGAGGCGGCAGCTCAGCTTCCTGGAGCAAGCCTCTGGTTAGTCCACTGCTGTTGAGCCTCAAAGCTTTTTCTCTGCTGGAAAGAAGG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75517557 950 - 121768101 GCTCCCTAGCTTTCCCAGAAGGGGCCCTCGTAAATTCTTGGGGAA---GAGGTCCACTCTGACCTTGAGATCACATTATGTTCTCCAGCAGACGTCATCCATCAGTGGAAACACTGTGCTTTCCCCACACAGTTAATCTGTGCTTGATGCTCCATGTTTTCAAAACTGAACAATACATGAAGAGCAAGGAAATTATTAACTATAGGTCAGGCTAACACTCACTTTGGTGGAGACGGTG--------------------------------------GGTAG-TGGTAGTATTCTGTTCCTTAAAGATGTTAACGCTATCCATTTAACTCTTTAAACTGTACGTTTATggccaggcacaatggctcatgtctgtaatcctggcacttgcggaggctaaggtgggaggattgcttg----agcccagaagttcaagaccagcctgggcaatatagcaagatcccatctctacttaaaaacaaaacaaaaCTATGCGTTTATATTGGATATACTCTATGTATGAGATGTATTGGATATCTTCTCTATGTATGATATCTTTCACAGTT-GGGGAAAAA---AGATAAAAACACATAGTAATAGGGAGAACGAAAGGGGAACCATCAAGAGGCCAGAGACTATATTCTACAAAGGGAGAGCAAATGAAAGAGGATGAACAGACAGGAAAAGGGTGAGGGAACCCACAGGCCAGAAAAGTAGAAGTGGG--GCAGTGCAGAGGGCCCACCTGCCCCAGGTCCCACCTCGAGGTCCCCATCCACTTA----------------------------------------------------------------GAGGTCCACCATTCCCATGCTGGCATGTGCGCCCTTGTCTGCGGTTTATGTTCACTCTG--TCCCTTCTTGCACTTCATGTTTCTCTTCATCCTTGACTTAGTAACCCTCGTGGCCTTGTGTCTCATCCACCCCACAGAAGATGGCAGCTCAGCTCCCCAGAGCAAGCCTCTGGTTGGCCCACTGCTGTTGAGCCTCAAAGCTTTGTCTCGGCTGGAAAGACAG i calJac3.chr12 C 0 C 0 e canFam3.chr4 27684932 97 + 88276631 I e mm10.chr14 24093499 39790 + 124902244 I a score=2185916.000000 s hg38.chr10_KI270825v1_alt 27567 721 + 188315 GCCTGAGGCTTCTGGCCGGTGCTCGGCTTCTACTCCAGAGCTGCTCAGGGTCGGCGCCTAAGCATGAGGTCTCCTCCTGCCTTGAAGCTGGGGTTTCCCACAGTCTCTGCTAGG----CCAGGAGCAAAGTCAAGCTCCATTTGAGTCCTGTTGCCCACCCATatcacagaatcatagctgttagcatgggaaggggccgcagaggtcatctcatattcaatttctt----------------------------------------ggtctcatggctggagTTGAAGAATCTGCTCTGCCTTTCCAGAATGATCTGAGCCAGTGTGAGACAGACACCACCTCCAGGAGGAGGCCCATTTGGCTGTGC-CCACAACCCCGCCCC----CCAGCACAGTCTCCATGTGGGGTAAATAAGCCTCTAACCCACCAGGGTACAAATCCTTTCAGGGCTGCTTGACAGCATGTCTCGGGGCTGCCCTGCAAGG--CCC--GTGTGTCCAGAAAGAGCGATCTC----------------------------------AGTGACTTAAGTGCCTTCCACCTGAAAAAGACATAGGATTTT-CCCCCCCttgtaattataaaagaaaaccaaggtacctgtagaaaatctggaaattacagaaaaatctaaagaagaaaata-aaatcacGATGGCCTAAGTGC--AACTGTGAAGGTTTGGCATCA-CACCTGAGCTCTGTGAAAGAAACCAGCCCTAAAACCAGCAGCCACCACCCCAAC--CCCTACA-CCCCCATCTGCCCAGTCAGTGACTTAAAAT s panTro4.chr10 76398172 719 + 133524379 GCCTGAGGCTTCTGGCCGGTGCTCGGCTTCTACTCCAGAGCTGCTCAGGGTCCGCGCCTAAGCATGAGGTCTCCTCCTGCCTTGAAGCTGGGGTTTCCCACAGTCTCTGCTAGG----CCAGGAGCAAAGTCAAGCTCCATTTGAGTCCTGTTGCCCACCCATatcacagaatcgtagctgttagcatgggaaggggccgcagaggtcatctcatattcaatttctt----------------------------------------ggtctcatggctggagTTGAA-AATCTGCTCTGCCTTTCCAGAATGATCTGAGCCAGTGTGAGACAGACACCACCTCCAGGAGGAGGCCCATTTGGCTGTGC-CCACAACCCCGCCCC----CCAGCACGGTCTCCATGTGGGGTAAATAAGCCTCTAACCCACCAGGGTACAAATCCTTTCAGGGCTGCTTGACAGCATGTCTCGGGGCTGCCCTGCAAGG--CCC--GTGTGTCCAGAAAGAGCGATCTC----------------------------------AGTGACTTAAGTGCCTTCCACCTGAAAAAGACATAGGATTTT-CCCCCC-ttgtaattataaaagaaaaccaaggtacctgtagaaaatctggaaattacagaaaaatctaaagaagaaaata-aaatcacaatggcctaAGTGC--AACTGTGAAGGTTTGGCATCA-CACCTGAGCTCTGTGAAAGAAACCAGCCCTAAAACCAGCAGCCACCACCCCAAC--CCCTACA-CCCCCATCTGCCCAGTCAGTGACTTAAAAT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76066176 722 - 133410057 GCCTGAGGCTTCTGGCTGGTGTTCGGCTTCTACTCCAGAGCCGTTCAGCGTCCGTGCCTAAGCATGAGATCTCCTCCTGCCTTGAAGCTGGGGTTTCCCACAGCCTTTGCTAGG----CCAGGAGCAAAGTCAAGCTCCATTTGAGTCCTGTTGCCCACCCAaatcacagaatcatagctgttagcatggaaaggggccgcagaggtcatctcgtattcaatttctt----------------------------------------ggtctcatggctgCAGTTGAA-AATCTGCTCTGCCTTTCCAGAATGATCTGAGCCAGTGTGAGACAGACACCACCTCCAGGAGGAGGCCCATTTGGCTGTGC-CCACAACCCCGCCCC----CCAGCATGGTTTCCATGTGGGGTAAATAAGCCTCTAACCCACCGGGGTACAAATCCTCTTAGGGCTGCTTGACAGCATGTCTCGGGGCTGCCCTGCAAGGACCCA--GCGTGTCCAGAAAGAGCAATCTC----------------------------------AGTGATTTAACTGCCTTCCACCTGAAAAAGACATAGGATTTT-TCCCCCCttgtaattataaaagaaaaccaaggtacctgtagaaaatctggaaattacagaaaaatcgaaagaagaaaata-aaatcacAATGGCATAAGTGC--AACTGTGAAGGTTTGGCATCA-CATCTGAGCTCTGTGAAAGAAACCAGCCCTAAAACCAGCAGCCACCGCCCCAAC--CCCTACA-CCCCCATCTGCCTAGCCAGTGACTTAAAAT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35008292 722 + 104879549 GCCTGAGGCTTCTGGCCAGTGCTTGGCCTCTACTCCAGAGCTGCTCAGGGTCTGCGCCTAAACATGAGGTCTCCTTCTGCCTTGAAGCTGGGGTTTCCCGCAGCCTCTGCTAGG----CCAGGAGCAAAGTCAAGCTCCATTTGAGTCCTGTTGCCCACCTGTatcacagaatcatagctgttagcatgggaaggggccgcagaggtcatctCATATTCAATTTCTT----------------------------------------GGCCTCATGGCTGGAGTTGAA-AATCTGCTCTGCCTTTCCAGAATGATCTGAGCCAGTGTGAGACAGACACCACCTCCGGCAGGAGGCCCATTTGGCTGTGC-CCACAACCCCGCCCC----CCAACACGGTCTCCATGAGGGGTAAATAAGCCTCTAACCCACCAGGGTACAAATTCTCTCAGGGCTGCTTGACAGCATGTCTCAGGGCTGCCCTGCAAGGCCCCA--GTGTGTCCAGAAAGAGCGATCTC----------------------------------AGTGATTTAACTGCCTTCCACCTGAAAAAGACATAGGATTTT-TCCTCCCttgtaattataaaagaaaaccaaggtacctgtagaaaatctggaaattacagaaaaatctaaagaagaaaata-aaatcacAATGGCAGAAGTGC--AACCGTGAAGGTTTGGCATCA-CATCTGAGCTCTGGGAAAGAAACCAGCCCTAAAACCAGCAGCCATCGCCCCAAC--CCTTACA-CCCCCATCTGCCCAGCCAGTGACTTAAAAT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73802061 740 - 130959383 GCCTGAGGCTTCTGGCTGGTGCTCGGCTTCTCCTCCAGAGCCGCTCAGGGTCCGCGCATAAGCATGAGGTCTCCTCCTGCCTTGAAGCTGGGGTTTCCCGTAACCTCTGCTATG----CCAGGAGCAAAGTCAAGCTCCATTTGATTCCTGTTGCCCACCCGTATCacagaatcatagctgttagcatgggaaggggccgcagaggtcatctcgtattcaatttcTT----------------------------------------GGCCTCATGGCTGGAGTTGAA-AATCTGCT-----TTTCCAGAATGATATGAGCCAGTGTGAGACAGACACCATCTCC---AGGAGGCCCATTTGGCTGTGC-CCACAATCCCGCCGC----CCAGCATGGTCTCCATGTGGTGTAAATAAGCCTCTAACCCACCAGGGTACAAATCCTCTCAGGGCTGCTTGACAGCATGTCTTGGGGCTGCCCTGCAAGG--CCC--ATGTGTCCAGAAAGAGCAATCTTAACTGTTGCTTAAGAGTTAAGAGTTAATCTTAAGAGTGACTTAACTGCCTTCCATTTGAAAAAGACATAGGATTTTCCCCCCCCttctaattataaaagaaaaccaaggtggctgtagaaaatctggaaattacagaaaaatctaaagaagaaaata-aaatcacAATGGCAGAAGTGC--AACTGTGAAGGTTTGGCATCA-CATCTGAGCT-------AGAAACCAGCCCTAAAACCACTAGCCACTGCCCCAAC--CCCCACA-CCCCCATCTGCCCAGCCAGTGACTTAAAAT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75364149 740 - 133195287 GCCTGAGGCTTCTGGCTGGTGCTCGGCTTCTCCTCCAGAGCCGCTCAGGGTCCGCGCATAAGCATGAGGTCTCCTCCTGCCTTGAAGCTGGGGTTTCCCGTAACCTCTGCTAGG----CCAGGAGCAAAGTCAAGCTCCATTTGATTCCTGTTGCCCACCCGTATCacagaatcatagctgttagcatgggaaggggccgcagaggtcatctcgtattcaatttcTT----------------------------------------GGCCTCATGGCTGGAGTTGAA-AATCTGCT-----TTTCCAGAATGATATGAGCCAGTGTGAGACAGACACCATCTCC---AGGAGGCCCATTTGGCTGTGC-CCACAATCCCGCCGC----CCAGCATGGTCTCCATGTGGTGTAAATAAGCCTCTAACCCACCAGGGTACAAATCCTCTCAGGGCTGCTTGACAGCATGTCTTGGGGCTGCCCTGCAAGG--CCC--ATGTGTCCAGAAAGAGCAATCTTAACTGTTGCTTAAGAGTTAAGAGTTAATCTTAAGAGTGACTTAACTGCCTTCCATTTGAAAAAGACATAGGATTTTCCCCCCCCttctaattataaaagaaaaccaaggtggctgtagaaaatctggaaattacagaaaaatctaaagaagaaaata-aaatcacAATGGCAGAAGTGC--AACTGTGAAGGTTTGGCATCA-CATCTGAGCT-------AGAAACCAGCCCTAAAACCACTAGCCACTGCCCCAAC--CCCCACA-CCCCCATCTGCCCAGCCAGTGACTTAAAAT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73228522 739 - 125196307 GCCTGAGGCTTCTGGCTGGTGCTCGGCTTCTCCTGCAGAGCCGCTCAGGGTCCGCGCGTAAGCATGAGGTCTCCTCCTGCCTTGAAGCTGGGGTTTCCCGTAACCTCTGCTAGG----CCAGGAGCAAAGTCAAGCTCCATTTGAGTCCTGTTGCCCACGAGTATCACAGAATCATAGCTGTTAGCATGGGAAGGGGCCGCAGAGGTCATCTCGTATTCAATTTCTT----------------------------------------GGCCTCATGGCTGGAGTTGAA-AATCTGCT-----TTTCCAGAATGATATGAGCCAGTGTGAGACAGATACCATCTCC---AGGAGGCCCATTTGGCTGTGC-CCACAATCCCGCCCC----CCAGCATGGTCTCCATGTGGTGTAAATAAGCCTCTAACCCACCAGGGTACAAATCCTCTCAGGGCTGCTTGACAGCACGTCTTGGGGCTGCCCTGCAAGG--CCC--GTGTGTCCAGAAAGAGCAATCTTAACTGTTGCTTAAGAGTTAAGAGTTAATCTTAAGAGTGACTTAACTGCCTTCCATTTGAAAAAGACATAGGATTTT-TCCCCCcttctaattataaaagaaaaccaaggtGCCTGTagaaaatctggaaattacagaaaaatctaaagaagaaaata-aaatcacaatggcAGAAGTGC--AACTGTGAAGGTTTGGCATCA-CATCTGAGCT-------AGAAACCACTCCTAAAACCACTAGCCACTGCCCCAAC--CCCCACA-CCCCCATCTGCCCAGCCAGTGACTTAAAAT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72060547 742 - 125710982 GCCTGAGGCTTCTGGCTGGTGCTCGGCTTCTCCTCCAGAGCCGCTCAGGGTCCGCGCGTAAGCATGAGGTCTCCTCCTGCCTTGAAGCTGGGGTTTCCCGTAACCTCTGCTAGG----CCAGGAGCAAAGTCAAGCTCCATTTGATTCCTGTTGCCCACCCGTatcacagaatcatagctgttagcatgggaaggggccgcagaggtcatctcgtattctatttctt----------------------------------------ggcctcatggctggagttgaa-aatttgct-----tttCCAGAATGATATGAGCCAGTGTGAGACAGACACCATCTCC---AGGAGGCCCATTTGGCTGTGC-CCACAATCCCGCCCC----CCAGCATGGTCTCCATGTGGTGTAAATAAGCCTCTAACCCACCAGGGTACAAATCCTCTCAGGGCTGCTTGACAGCATGTCTTGGGGCTGCCCTGCAAGG--CCCCAGTGTGTCCAGAAAGAGCAATCTTAACTGTTGCTTAAGAGTTAAGAGTTAATCTTAAGAGTGACTTAACTGCCTTCCATTTGAAAAAGACATAGGATTTT-TCCCCCCttctaattataaaagaaaaccaaggtgcctgtagaaaatctggaaattacagaaaaatctaaagaagaaaata-aaatcacAATGGCAGAAGTGC--AACTGTGAAGGTTTGGCATCA-CATCTGAGCT-------AGAAACCACTCCTAAAACCACTAGCCACTGCCCCAAC--CCCCACACCCCCCATCTGCCCAGCCAGTGACTTAAAAT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75518507 710 - 121768101 GCCTGCGGCTT-TGGCTGGTGCTCAGCTCCTACCCTAGAGCTGCTCAGGGTCCACACCTAAGCATGAGGTCTCCTCCTACCTTGAAGCTGGGGTGTTCTGCAGCCTGTGCTAGG----CCAGGAGCGAAGTCAAGCTCCATTCGAGTCCTGTTCCCCACTCGTatcacagaatcgtagctgttagcatgggaagggaccgcagaggtcatctcatattcaatttcTT----------------------------------------GGCCTCATGGCTGGAGCTGAA-AATCTACTCTGCCTTTCCAGAATGATCTGAGCCAGCATGAGACAGACACCATCTTGGGGAGGAGACTGATTTGGCTGTGC-CCACAACCCTGCCCC----CCAGCATGGTCTCCATGTGGTATAGATAAGCCTCTAACCCACCAGGGCACACATCCCCCCAGGGCTGCCTGACAGCATGTCTTGGGCCTGCCCTGCGAGGCCCCA--GTGTGCCCAGA------GATCTC----------------------------------AGTGACTTAACTGCCTTCCATTTCAAAAACACATAGGATTGTCTTCCCCCTTGTAATTACAAAAGAAAACCAACGTGCCCGTAGAAAATTTGGAAATTACAG---------AAGAAGAAAATA-AAATCCCAGCACCAGAAGTGC--GGCTGTTAAGGTTTGGCATCGTTATCTGAGTTCTGTGAAAGAAAGCAGTCCTAAAACCAGCAGCTACTGCTCCAAACGCCATACA-CCCCCATTTGCCAGGCCAGTGACTGCAAAT i calJac3.chr12 C 0 C 0 s canFam3.chr4 27685029 649 + 88276631 GCCTGAGCCTCTGGGCCAGCGCTCGGCTCCTACTCCAGTCCCTTTTGGTTTTCACTCCTAAACATGAGGT----------GTTGAA-----GGGCTCCTCCAGCCTCTGGAAAGGCTCCCCAGAGCTGGG----GTTCCGCTGAAGTCCCATTCCTCACCCCTATCCCAGa--------tgtcagcaagggaaggggccttagagattatctagtctgcactaccttcaatggccaggtgctgagcccacgagcatgatctgtccaaggcctcacggctggAACTAAA-AGTCACCTCTGCCTTTCCAGAAGGATCTGAGCCTGCATGAGACAGATGCCAACTCAGGGCAGAGACCGATCTTCCTGTGCACCTCTCCCCTGTCCCAGTTTCAGCATGGCTT---------GGAAACAAGC-----------------AGGAATTCCCTCAATGCTACTTGGCAG-----------------CTCCAGAA--ACA--GTTTGT-----------GATTCT----------------------------------AGCAACTTAGCTGGCCTCCATTTTTAAAAGAGACATTTTTTTTCCATTCCTTTTAATTATGAAAGAAAACCAAGTTTCCTATAGAAAACATGT--------GAAAGTCTAAAAGAAGAAAAGGTCACTCATAAAGCTGCATGTGCAAAACTTTAAGGTTTTGGCATAA----CTGGGCTCGTGAAAAGAACCCATGCCTAAGACAAGTAGCTGCCGCCCCATTTGCCC----------------------------------- i canFam3.chr4 I 97 C 0 e mm10.chr14 24093499 39790 + 124902244 I a score=706107.000000 s hg38.chr10_KI270825v1_alt 28288 333 + 188315 CCATCGTGTTAggccgggagtggtggctcatgcctgtaatcccagcactttgggaggccgaggcaggcagatcacctgaggtcgggagtttgagaccggcctgaccaacatggagaaaccccgtctctactaaaaatacaaaattagccaggtgtggtggcgcacgcctgtaatcccagctactcaggaggctaaggcaggagaatcacttgaacccagcaggtagaggctgcagtgagctgagagcatgccactgcactccagactgggcaacgagagcgaaactccgtctcaaaa------aaaaaa-T--ATATCAACGGCTCTGCTGCCCATTCTGAG s panTro4.chr10 76398891 333 + 133524379 CCATCGTGTTAggccgggagtggtggctcatgcctgtaatcccagcactttgggaggccgaggcaggcagatcacctgaggtcgggagtttgagaccagcctgaccaacatggagaaaccccgtctctactaaaaatacaaaattagccaggtgtggtggcgcatgcctgtaatcccagctactcaggaggctaaggcaggagaatcacttgaacccagcaggtagaggctgcagtgagctgagagcatgccactgcactccagactgggcaacgagagcgaaactccgtctcaaaa------aaaaaa-T--ATATCAACGGCTCTGCTGCCCATTCTGAG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76066898 335 - 133410057 CGATCGTGTTAggccaggagcagtggctcatgcctgtgatcccagcactttgggaggccgaggcaggcagatcacctgaggtcgggagtttgagaccgacctgaccaacatggagaaaccccgtctctactaaaaatacaaaattagccaggcgtggtggcgcatccctgtaatcccagctactcaggaggctaaggcaggagaatcacttgaacccagcaggtagaggctgcagtgagccgagagcacgccattgcactccggactgggcaatgagagcgaaactccgtctcaaaa------aaaaaa-taaaaaTCCATGGCACTGCTGCCCACTCTGAG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35009014 333 + 104879549 CGATCACGTTAggctgggagcggtggctcatgcctgtaatcccagcactttgggaggctgaggcgggcggatcacctgaggtcaggagtttgagaccggcctgaccaacatggagaaaccccgtctctactaaaaatacaaaattagccaggtgtggtggcgcatgcctgtaatcccagctactcaggaggcaaaggcagaagaatcacctgaacccagcaggtagaggctgcagtgagctgagagcacgccattgcactccagactgggcaacgagagcaaaactccgtctcaaaa------aaTATA-T--ATATCGATGGCGCTGCTGCCCACTCTGAG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73802801 339 - 130959383 TGATGGTGTTAgaccgggagcagtggctcacacctgtaatcccagcactttgggaggccgagatgggcggatcacctgaggtcaggagttcgagaccagcctgaccaacatggagaaaccccgtctctactaaagatacaaaattagccaggcgtggtggcgcatgcctgtgatcccagctactcgggaggctgaggcaggggaatcacttgaacccgggaggcagaggctgcggtgagccgagagcacgccattgcactccagcctgggcaacaagagcgaaactccgtctcaaaaaaaataaaaaaa-a--agaTTGATGGCGCTGTTGCCCACTCTGAG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75364889 339 - 133195287 TGATGGTGTTAgaccgggagcagtggctcacacctgtaatcccagcactttgggaggccgagatgggcggatcacctgaggtcaggagttcgagaccagcctgaccaacatggagaaaccccgtctctactaaagatacaaaattagccaggcgtggtggcgcatgcctgtgatcccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggcagaggctgcggtgagccgagagcacgccattgcactccagcctgggcaacaagagcgaaactccgtctcaaaaaaaataaaaaaa-a--agaTTGATGGCGCTGTTGCCCACTCTGAG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73229261 338 - 125196307 CGATGGTGTTAgaccgggagcagtggctcacacctgtaatcccagcactttgggaggccgagatgggcggatcacctgaggtcaggagttcgaaaccagcctgaccaacatggagaaaccccgtctctactaaaaatacaaaattagccaggcatggtggcgcatgcctgtgatcccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggcagaggctgcggtgaaccaagagcacgccattgcactccagcctgggcaataagagcgaaact--gtctcaaaaaaaaaaaaaaaaga--agatcgaTGGCGCTGCTGCCCACTCTGAG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72061289 339 - 125710982 CGATGGTGTTAgaccgggagcagtggctcacacctgtaatcccagcactttgggaggccgagatgggcggatcacctgaggtcaggagttcaagaccagcctgacaaacatggagaaaccccatctctactaaaaatataaaattagccaggcgtggtggcgcatgcctgtgatcccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggcagaggctgcggtgagccgagagcatgccattgcactccagcctgggcaacaagagcgaaactccgtctcaaaaaaaattaaaaaa-a--agaTCGATGGCGCTGTTGCCCACTCTGAG i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27685678 72 + 88276631 CTCTCGGGTC--------AGCACTGGCTC---------------------TGGGCTGGCGAGG--------------------------------------------------------------------------------------AAGTGTG---------------------------------------GGCAGCCGAAT-------------------------------GGCTGGGTGCACG----------------TGGGCAA--------------------------------------------------------------------- i canFam3.chr4 C 0 C 0 e mm10.chr14 24093499 39790 + 124902244 I e calJac3.chr12 75519217 0 - 121768101 C a score=904933.000000 s hg38.chr10_KI270825v1_alt 28621 277 + 188315 GATGGCGCAGGGTGTGGGCTGTCAAGGAGACAGAGGCAGGCCCTGTCCCTATGGACACAAGGGCCCACTCCAACTACC--AGAGCCCCGCACAGCTCTGTGACACCCCGTGGCCACAGGTGAGATCAAGACTGCAGGGCCACAGTGGAA-CTTCACCCAGCAGGAAATGATGAGGGAGGCATCCACATC-AGTCTG-CCCCCACCAGCCTGGCCACCAGTGGAGTGTGAGTGAAGCTTCTGGAGAACATTCTGCCCCCAAGCCCCTCCAAGAAAAAGGATCA s panTro4.chr10 76399224 277 + 133524379 GATGGCGCAGGGTGTGGGCTGTCAAGGAGACAGAGGCAGGCCCTGTCCCTATGGACACAAGGGCCCACTCCAACTACC--AGAGCCCCGCACAGCTCTGTGACACCCCGTGGCCACAGGTGAGATCAAGACTGCAGGGCCACAGTGGAA-CTTCACCCAGCAGGAAATGATGAGGGAGGCATCCACACC-AGTCTG-CCCCCACCAGCCTGGCCACCAGTACAGTGTGAGTGAGGCTTCTGGAGAACATTCTGCCCCCAAGCCCCTCCAAGAAAAAGGATCA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76067233 277 - 133410057 GATGGTGCAGGCTGTGGGCTGTCAAGAAGACACAGGCAGGCCCTATCCCTACGGACACAAGGGCCCACTGCAACTACC--AGAGCCCCGCACAGCTCTGTGACACCCCGTAGCCACAGGTGAGATCAAGACTGCAGGGCCACGGTGGAA-CTTTACCCAGGAGGAAATGATGAGGGAGGCATCCACACC-AGTCTG-CCCCCACCAGCCTGGCCACCAGTGCAGTGTGAGTGAGACTTCTGGAGAACATTCTGCCCCCAAGCCCCTCCAAGAAGAAGGATCA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35009347 276 + 104879549 GATGGCACGGGGTGTGGGCTGTCAAGGAGGCACAGACAGGCCCTGTCCCTACGGACACAAGGGCCCACTCCAACTACC--AGAGCCCCACACAGCTCTGTGACACCCCGTAGCCACAGGTGAAATCAAGACTGCAGGGCCACGGTGGAA-CTTTACCCAGCAGGAAATGATGAGGGAGGCATCCACACC-AGTCTG-CCCCCACCAGCCTGGCCACCAGTGCAGTGTGAGTGAGGCTTCTGGAGAACATTCTGCCCCC-AGCCCCTCCAAGAAAAAGGATCA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73803140 277 - 130959383 GATGGCGCTGGGTGTGGGCTGTCAAGGAGGCACAGGCAGGCCTTGTCCCTACAGACACAAGGGCCCACTCCAACTACC--AGAGCCCTGCACAGCTCTGTGACACCCCGTACCCACAGGTGAGATCAAGACTGCAGGGCCATGGTGGAA-CTTTACCCAGCAGGAAATGATGAGGGAGGCATCCACACC-AGTCTG-CCCCCACCAGCCTGGCCACCAATGCAGTGTGAGTGAGGCTTCTGGAGAACATTCTGCCCCCAAGTCCCTCCAAGAAAAAGGATTG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75365228 277 - 133195287 GATGGCGCTGGGTGTGGGCTGTCAAGGAGGCACAGGCAGGCCTTGTCCCTACAGACACAAGGGCCCACTCCAACTACC--AGAGCCCTGCACAGCTCTGTGACACCCCGTACCCATAGGTGAGATCAAGACTGCAGGGCCATGGTGGAA-CTTTACCCAGCAGGAAATGATGAGGGAGGCATCCACACC-AGTCTG-CCCCCACCAGCCTGGCCACCAATGCAGTGTGAGTGAGGCTTCTGGAGAACATTCTGCCCCCAAGTCCCTCCAAGAAAAAGGATTG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73229599 277 - 125196307 GATGGCGCTGGGTGTGGGCTGTCAAGGAGGCACAGGCAGGCCTTGTCCCTACAGACACAAGGGCCCACTCCAACTACC--AGAGCCCTGCACAGCTCTGTGACACCCCATACCCACAGGTGAGATCAAGACTGCAGGGCCATGGTGGAA-CTTTACCCAGCAGGAAATGATGAGGGAGGCATCCACACC-AGTCTG-CccccaccagcctggccaccagTGCAGTGTGAGTGAGGCTTCTGGAGAACATTCTGCCCCCAAGTCCCTCCAAGAAAAAGGATCA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72061628 278 - 125710982 GATGGCGCTGGGTGTGGGCTGTCAAGGAGGCACAGGCAGGCCTTGTCCCTACAGACACAAGGGCCCACTCCAACTACC--AGAGCCCTGCACAGCTCTGTGACACCCCGTACCCACAGGTGAGATCAAGACTGCAGGGCCATGGTGGAA-CTTTACCCAGCAGGAAATGATGAGGGAGGCATCCACACC-AGTCTGCCCCCCACCAGCCTGGCCACCAGTGCAGTGTGAGTGAGGCTTCTGGAGAACATTCTGCCCCCAAGTCCCTCCAAGAAAAAGGATCG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75519217 279 - 121768101 GATGGCACTGAGTGTGAGCTGTCAAGGAGGCAAAGGCAGGCCCTGTCCCTACGGACACATGGGCCCGCTCCAACTACCAGAGAGCCCTGCACAGCTCTGTGACACCCCGTAGCCACAGGTGAGATCAAGACTGCAGCACCATGGTGGAA-CTTTACCCGGCAGGAAAGGATGAGGGAGGCATCCACACCAAGTCTG--CCCCACGGGCCTGGCCATCAGTGCAATGTGAGTGAGTGGTCTGCAGAACATTCTGCCCCCAAGCCCCTCCAAGCAAAAGGATCA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27685750 226 + 88276631 -------------GAGGGTTGT-----------------GCCCT----------------GGGCCTCAGCCAGCTGCA--CCAGCCCC-TATGGCCCTGTGA-GTCCTGTGGCTACAGGTGAGGCCAAGACTGCAGGTGCACAAGGGAACCTCCACCCAGCAGGAAAGGACTGAGGAGGCATGAACCCCAAGTCTG-CCCCTATTGGCCAAGTCACTGCTGCAGCATGAG----GCTTTTCTCTAGCACTGTGCCCCC-ACCTACCCCAGGCAAAGAGACCA i canFam3.chr4 C 0 C 0 e mm10.chr14 24093499 39790 + 124902244 I a score=1541452.000000 s hg38.chr10_KI270825v1_alt 28898 506 + 188315 ---GAG-AAGGAGGGCTCTGCTCTGCCCC-------------------AGGCCTCA-ACCTGGCTTCCTGCAGCTAAAGGCCCAGCCTCCCAACTTCCTCATCACCTTGCAACAC---GGAGTTCAG---GCCCACGTGGGCTGTTCTGGGAGTCCAGCAATGCTGGGTGATCTCCCAGTGTGATGCTGTCAG----------------------------GTACTACAAAGCAGCCCCCAAG-CAGGTGGGGCCAT-TCCCAGCCAAGGGCCC---------------------CAGACAGGGCCCTGACTGAGAAT-------GCTA------CCCAGAGCACTCAGCTCAC----------TCCCTTTTGCTTTTCCCAA-----------GCCTGCAGAATTGAATGTGAGGGCCAGAGGGCAGAATCTGGGTCTC-ACACAGATGGGCAGCCTGGCTGCAGTCACCAGTTCATGCCACACTGGACAGATGGGTGG------------CAGGGAAGGGCAGGA------AGGAGTGAGAGAGAGGCTGATGCAGCGGGTAGCAGGGACTGCAAATTGTCATGTG---------------------------------------------------------------------------------AGACAGAAAGAACCTA-CACATCAGCC----------AACTCCAGC---TACGTGCTGCAGAGGAG s panTro4.chr10 76399501 506 + 133524379 ---GAG-AAGGAGGGCTCTGCTCTGCCCC-------------------AGGCCTCA-ACCTGGCTTCCTGCAGCTAAAGGCCCAGCCTCCCAACTTCCTCATCACCTTGCAACAC---GGAGTTCAG---GCCCATGTGGGCTGTTCTGGGAGTCCAGCAATGCTGGGTGATCTCCCAGTGTGATGCTGTCAG----------------------------GTACTACAAAGCAGCCCCCAAG-CAGGTGGGGCCAT-TCCCAGCCAAGGGCCC---------------------CAGACAGGGCCCTGACTGAGAAT-------GCTA------CCCAGAGCACTCAGCTCAC----------TCCCTTTTGCTTTTCCCAA-----------GCCTGCAGAATTGAATGTGAGGGCCAGAGGGCAGAATCTGGGTCTC-ACACAGATGGGCAGCCTGGCTGCAGTCACCAGTTCATGCCACACTGGACAGATGGGTGG------------CAGGGAAGGGCAGGA------AGGAGTGAGAGAGAGGCTGATGCAGCGGGTAGCAGGGACTGCAAATTGTCATGTG---------------------------------------------------------------------------------AGACAGAAAGAACCTA-CACATCAGCC----------AACTCCAGC---TACGCGCTGCAGAGGAG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76067510 507 - 133410057 ---GAGAAAGGAGGGTTCTGCTCTGCCCC-------------------AGGCCTCA-ACCTGCCTTCCTGCAGCTAAAGGCCCAGCCTCCCAACTTCCTCATCACAGTGCAACAC---GGAGTTCAG---GCCCACGTGGGCTGTTCTGGGAGTCCAGCAATGCTGGGTGATCTCCCAGTGTGATGCTGTCAG----------------------------GTACCACAAAGCAGCCCCCAAG-CAGGTGGGGCCGT-TCCCAGCCGGGGGCCC---------------------CAGACAGGGCCCTGACTGAGAAT-------GCTA------CCCAGAGCACTCAGCTCAC----------TCCCTTTTGCTTTTCCCAA-----------GCCTGCAGAATTGAATGTGAGGGCCAGAGAGCAGGCTCTGGGTCTC-ACACAGATGGGCAGCCTGGCTGCAGTCACCAGCTCATGCCACAATGGACAGATGGGTGG------------CAGGGAAGGGGAGGA------AGGAGTGAGAGAGAGGCTGATGCAGCGGGTAGCAGGGACTGCGAATTGTCATGTG---------------------------------------------------------------------------------AGCCAGAAAGAACCTA-CACATCAGCC----------AACTCCAGC---TACGTGCTGCAGAGGAG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35009623 506 + 104879549 ---GAG-AAGGAGGGCTCTGCTCTGCCCC-------------------AGGCCTCA-ACCTAGCTTCCTGCAGCTAAAGGCCCAGCCTCCCAACTTCCTCATCACCCTGCAACAC---GGAGTTCAG---GCCCACGTGGACTGTTCTGGGAGTCCAGCAATGCTGGGTGATCTCCCAGTGTGATGCTGTCAG----------------------------GTACCACAAAGCAGCCCCCAAG-CAGGTGGGGCCGT-CCCCAGCCGGGGGCCC---------------------CAGACAGGGCCCTGACTGAGAAT-------GCTG------CCCAGAGCACTCAGCTCGC----------TCCCTTTTGCTTTTCCCAA-----------GCCTGCAGAATTGAATGTGAGGGCCAGAGGGCAGGCTCTGGGTCTC-ACACAGATGGGCAGCCTGGCTGCAGTCACCAGCTCATGCCACACTGGACAGATGGGTGG------------CAGGGAAGGGGAGGA------AGGAGTGAGAGAGAGGCTGATCCAGCTGGTAGCAGGGACTGCAAATTGTCATGTG---------------------------------------------------------------------------------AGCCAGAAAGAACCTA-CACATCAGCC----------CACTCCAGC---TATGCGCTGCAGAGGAG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73803417 567 - 130959383 ---GAG-AAGGAGGGCTCTGCTCTGCCCC-------------------AGGCCTCAGACCTGGCTTCCTGCAGCTAAAGGCCCAGCC--------------------TGCAACAT---GGAGTTCAG---GCCCACGTGGCCTGTTCTGGGAGTCCAGCAATGCTGGGTGATCTCCCAATGTGATGCTGTCAG----------------------------GTGCCACAAAGCAGCCCCCATT-CAGGTGGGGCCGT-TCCCAGCCGGGGGCCC---------------------CAGACAGGGCCCTGACTAAGAAT-------GCTG------CCCAGAGCACTCAGCTCAC----------TCCCTTTTGCTTTTCCCAA-----------GCCTGCAGAATTGAATGTGAGGGCCAGAGGGCAGGCTCTGGGTCTC-ACACAGATGGGCAGCCTGGCTACAGTCACCAGCTCATGCCACACTGGACAGATGGGCGG------------CAGGGAAGGGGAGGA------CGAAGTGAGAGAGAGGCTGACGCAGCAGGTAGCAGGGAC-GTGAATTGTCATGTGAGCCAAAAAGAAACTACGCAGCAGCCAACTCCAGCTACGTGCTGCAGAGAAACAGGTAGCAGGGACGTGAATTGTCATGTAAGCCAAAAAGAAACTA-CACAGCAGCC----------AACTCCAGC---TATGTGCTGCAGAGAAG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75365505 486 - 133195287 ---GAG-AAGGAGGGCTCTGCTCTGCCCC-------------------AGGCCTCAGACCTGGCTTCCTGCAGCTAAAGGCCCAGCC--------------------TGCAACAT---GGAGTTCAG---GCCCACGTGGCCTGTTCTGGGAGTCCAGCAATGCTGGGTGATCTCCCAATGTGATGCTGTCAG----------------------------GTGCCACAAAGCAGCCCCCATT-CAGGTGGGGCCGT-TCCCAGCCGGGGGCCC---------------------CAGACAGGGCCCTGACTGAGAAT-------GCTG------CCCAGAGCACTCAGCTCAC----------TCCCTTTTGCTTTTCCCAA-----------GCCTGCAGAATTGAATGTGAGGGCCAGAGGGCAGGCTCTGGGTCTC-ACACAGATGGGCAGCCTGGCTACAGTCACCAGCTCATGCCACACTGGACAGATGGGCGG------------CAGGGAAGGGGACGA------AGAAGTGAGAGAGAGGCTGACGCAGCAGGTAGCAGGGAC-GTGAATTGTCATGTG---------------------------------------------------------------------------------AGCCAAAAAGAAACTA-CACAGCAGCC----------AACTCCAGC---TACGTGCTGCAGAGAAG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73229876 486 - 125196307 ---GAG-AAGGAGGGCTCTGCTCTGCCCC-------------------AGGCCTCAGACCTGGCTTCCTGCAGCTAAAGGCCCAGCC--------------------TGCAACAC---GGAGTTCAG---GCCCACGTGGCCTGTTCTGGGAGTCCGACAATGCTGGGTGATCTCCCAATGTGATGCTGTCAG----------------------------GTGCCACAAAGCAGCCCCCATG-CAGGTGGGGCCAT-TCCCAGCCAGGGGCCC---------------------CAGACAGGGCCCTGACTGAGAAT-------GCTG------CCCAGTGCACTCAGTTCAC----------TCCCTTTTGCTTTTCCCAA-----------GCCTGCAGAATTGAATGTGAGGGCCAGAGGGCAGGCTCTGGGTCTC-ACACAGATGGGCAGCCTGGCTGCAGTCACCAGCTCATGCCACACTGGACAGATGGGcgg------------cagggaaggggagga------agaagtGAGAGAGAGGCTGACGCAGCAGGTAGCAGGGAC-GTGAATTGTCATGTG---------------------------------------------------------------------------------AGCCAAAAAGAAACTA-CACAGCAGCC----------AACTCCAGC---TACGTGCTGCAGAGAAG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72061906 486 - 125710982 ---GAG-AAGGAGGGCTCTGCTCTGCCCC-------------------AGGCCTCAGACCTGGCTTCCTGCAGCTAAAGGCCCAGCC--------------------TGCAACAT---GGAGTTCAG---GCCCACGTGGCCTGTTCTGGGAGTCCAGCAATGCTGGGTGATCTCCCAATGTGATGCTGTCAG----------------------------GTGCCACAAAGCAGCCCCCATG-CAGGTGGGGCCGT-TCCCAGCCGGGGGCCC---------------------CAGACAGGGCCCTGACTGAGAAT-------GCTG------CCCAGAGCACTCAGCCAAC----------TCCCTTTTGCTTTTCCCAA-----------GCCTGCAGAATTGAATGTGAGGGCCAGAGGGCAGGCTCTGGGTCTC-ACACAGATGGGCAGCCTGGCTGCAGTCACCAGCTCATGCCACACTGGACAGATGGGCGG------------CAGGGAAGGGGAGGA------AGAAGTGAGAGAGAGGCTGACGCAGCAGGTAGCAGGGAC-GTGAATTGTCATGTG---------------------------------------------------------------------------------AGCCAAAAAGAAACTG-CGCAGCAGCC----------AACTCCAGC---TACCAGCTGCAGAGAAG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75519496 459 - 121768101 ---GAG-AAGGAGGGCTCTGCTCTGCCCC-------------------GGGCCCTT-A-----------------------CCACCC--------------------TGCAACAT---GGAGTTCAG---GCCCACATGGGCTGTTCCGGGAGCCCAGCAATGCTGGGTGATCTCCCAGTATGATGCTGTCAG----------------------------GTATCACAAAGCAGCCCCCATG-CAGGTGGGGCCCT-TCCCAGCGGGGAGCCC---------------------CAGACAGGGATCTGACTGAGAAG-------GCTG------CCCAGAGCATTCAGCTCAC----------TCCCTTTTGATTTTCCCAA-----------GCCTGCGGAATTGAATGCGAGGGCCAGAGGGCAGGCTCTGGGTCTC-ACACAGATGGGCTGCCTGGCTGCAGCCACCAGCTCACACCACACTGGACAGAGGGGAGG------------CAGGGAAAGGGAGGA------GGGAGT----GAGAGGCTGATGCAGCAGGTAGCAGGGACTGTGGATTATCGTGAG---------------------------------------------------------------------------------AGCCAGAAAGAACCCA-CACATCAGCC----------AACTCCAGC---TACATGCTGCAGAGGAG i calJac3.chr12 C 0 C 0 s mm10.chr14 24133289 531 + 124902244 ---GAG-TAGTAGAGGCAGGTTGTACGCT-------------------AGGCCTGAGCCCTGCCTCCTTGTAACCACAGGCTATGCCTCTCCCCCAGTTA-------TGCAGCACCTGGGACCTGCC---TCCTCTGCAGGCTGCTTCTGGGGCCCTGTGGCTCTGAGTG---TCACAAGGTGATGCTCTGAGtttttttttttttttttttttttttttttttttACAACAGGGTCCCAAGC-CAGGTAGGA-CAT-TTCCAACCTGAAGCTT---------------------CATATAGCACACCAAATGTGGACACTCCGAGTTC------CCCACCCCCCCCAACCCCCAAATATTCCTTCCTCCTTGCTTCTCATAGCACAGCTTGACACATGGGGGCTTGAACATGAGGACCTGAGG---GGCT---GGTCAC-ACTTCAATGGTC--------------CCCCAGTGCAC----CACTAGGCAGACAGATGG------------CAGGGCACAAGAGGAGTCAGCAGAAGTGGGTGGGAG-------CATCAGGTA--AGAGACTGCGCATTGTCA-GTG---------------------------------------------------------------------------------AACC---------TCG-TTCATCAGCCCGAGGACGGTGGCTCCGGCACTCATGGGTCCCAGTGGAG i mm10.chr14 I 39790 C 0 s canFam3.chr4 27685976 485 + 88276631 GAGGAG-GAGAAGGACTCTTCCCTGACCCCAACTCGGGGCATTTAATGAGGCC--AGTCTGGGCTTCCTG-----------CCAGCC--------------------TG---------GAATTCCAGAGAGCCTTCATG-------------GTCCAGCGACGCTGGGTG---------------------------------------------------GGATCACAATGCAGCCCCCATGCCAGGCAAGGCCTTCTTCCCGCTGCGGGCCCAACCTGGTCCTCACCCCCTTGCAGATAGGACTCTGATTGTGAAC-------ATCAGGGGATCCTAGCGTCCT---TCAAA----------TCCCTTTTGCTCTTCACAG-----------CCC--------TGAATATAAGCACCTGAGGGGAGGATCCGAATCTCAACACAGATCAACTGCCTGGCTGCAACCACCA-TCCACACTTTGCTGGGTGTATGGAGGGACAGAACGGACACATGGGAGGGAAGGG------AGGAGTCG--GAGGCGTTGATGCAGCAGGTAGAAGGGGCTCCCGAGTATCACGAG---------------------------------------------------------------------------------CGCTGGGAAGAACCTCTCACGGCAGCC----------GA-TCCAGC---TACACACTGCAGGGCAG i canFam3.chr4 C 0 I 669 a score=7785672.000000 s hg38.chr10_KI270825v1_alt 29404 1996 + 188315 A--AGCT--------------GTCTCA---------------AGTTTAGAAATACAG-------GAAAGCT--------------GAC----TGACTAGGAAG--AGATTAAAAACTCACATCTTCA-AACACAGCC------------TTACAGAAATTGACCTTTATTTGTTGTACTAAAGCCTGTTTAACTTTTGATACAAAGTAACATTTTAGTACAGAAAATCCCAGTCTGTCAGCTCAGTACCTGTCTGTGCACACTGTACCATCTCAGTCCCACTCTGCCTGTAACTTAGAAA-ACAGCCCCTACCCCCAGAGGGTCTGCGAGTTAATACCTTGAGAATAGTCTACAG---TTTTTCATAGTTTGTCTGAGCTA---GAAAACTTGTACCTGTAAAACAAAGGACAGCATTGAGGACTGAAACTTGTCTCTTTTTTG-------AACAACTGTGCAAGAAAATATATCCCTTTTT---AAAAAACATCAGTTATGGCTAAACTACAATCTAGTGTCTAGAATTACAAAGAATAAAATGAAATCAAAGATTTCTCGCTAGTAAAATGAAATGTTAGGAACAGTATTAAAATATAGGTCCTACCCCAACGACACTTACACAGAGCCCAGTACAGTACCTA-TTATTAACAGGACGCATAG-CTTAAGGAGGAACCACATCAAATCTTCAGCCAGACATATCTAGCCTCAGAAGTGC-------------------------AAAA-------AAAAAAAAA-------------GCCCCCA------AA----------CGAAGACACCCACACTGAGTAGGGTGCATGCCGTGAGTGCTGTAATCAAGATTAAAAAGACCTCAGTTTTTCTTTTTAGACTGTTGATAGTG---ACAATAACCATTATGCTTCCCCTAAAAGCTCTCAATTCAATGTCTGAAACATGAATGTTTTCATATCAAAAAGAACTGATGTACC--TGCCACCCTCTAAAAAGTTTAAGAATTACCCTGCAAACATTGCACTGATGAAGGCTGTCACG----ACTTA------CAGAGCCTAAGGAGGACCCAATGGCAGGCATCAGCAC--AGCTGAACACC---ACCTGGACCCCACTGCAGCCCTG--CCCACGCAGCT-----CTCACGGAGCAGACACAGTCCTCAAGTAATAAGCACAGATGGAGGAGAAACGAGAGGCTGTGGAAGGCAGGAGAGAAAGGCCGAGAGACGAGTTTGTAAGAATGCCAAAGTCACCTTCCC----CAT-------------TGTGGGAGGAAAATGC-------------------CA--AAGGCACTGGTTCTGCTGCCACAGGCAGTCTGAGCACCTGGAGTTGTGACGTCCTTCCAGGAGAGGTGCCACCAAGGAGCAGGAGGTTTGTCAAAGCTCTGGTCCCACCAACAAGAACCTCCCAAAGCAAAGCAGCCCCC-----ATTGAGGTTCCAAGGTCGTTTTGCTGAAGACGGGAACGAAA-CCAACACCAAAGCGACAGGGG--GTTGACAGA--GGGGACAGGGGCTGGGCACCGGCAACATGGAGCCGTTCAAGTAAACATAAACCACCAAATACTTAGAAAAGGCTTGTAAACGAGTGATCCGAAAGGTTCT---CTTTGCAGCATCTCTGATCAGCTGGCTAAAGAAAGGTGGGTGCTGAACC------------C-----------GTCTTTAGTG--------TTATCTG----TTTTGTGTTAAAGCACACGTGTGACACGGGCAGAGTGTGTGGGCCTGGGCCTGGATCGCACGCAGCCGTGGCCCTC-TGTCT-ACAAAGGAGGTGCTTCTGG-GTCCTGGTTC-CGGATCCTTCCCCCGCATGTTCATAGACGGACAGACTTCTACTTTCAGTCGCTAGAAAAGAGCTGAGTCTGGTGTCCCCTCAGGC-GGCCAGCTGCAGTCATCCACAGCACAGCATT------CTCCTAGAGCGGGCAGGCTGGAATCCACAGGACTTTATTTTGTTCTTGATTGACCATTGCCAAGATCTGAGTGCAAATGCTTGACAGGGCTCCTCCCTGGATGACCCCTGCAAAAGAG-CCCCCCAGACAC--G-----TCATTCAGCTCAGAG-TAAGA----CCCCAGGTTTGAGGCAAGGCAGTACAGCTTGCACTCTTTCTACTGTGT-GGCTGTCTGCTTTGTGCTCCTTGGCACTCTGCTCCATCCCCACCTGA--CTCTCCTTCACCAGCAAGAAACTGGG s panTro4.chr10 76400007 2004 + 133524379 A--AGCT--------------GTCTCA---------------AGTTTAGAAATACAG-------GAAAGCT--------------GAC----TGACTAGGAAG--AGATTAAAAACTCGCATCTTCA-AACACAGCC------------TTACAGAAATTGACCTTTATTTGTTGTACTAAAGCCTGTTTAACTTTTGATACAAAGTAACATTTTAGTACAGAAAATCCCAGTCTGTCAGCTCAGTACCTGTCTGTGCACACTGTACCATCTCAGTCCCACTCTGCCTGTAACTTAGAAA-ACAGCCCCTACCCCCAGAGGGTCTGCGAGTTAATACCTTGAGAATAGTCTACAG---TTTTTCATAGTTTGTCTGAGCTA---GAAAACTTGTACCTGTAAAACAAAGGACAGCATTGAGGACTGAAACTTGTCTCTTTTTTG-------AACAACTGTGCAAGAAAATATATCCCTTTTT---AAAAAACATCAGTTATGGCTAAACTACAATCTAGTGTCTAGAATTACAAAGAATAAAATGAAATCAAAGATTTCTCACTAGTAAAATGAAATGTTAGGAACAGTATTAAAATATAGGTCCTACCCCAACGACACTTACACAGAGCCCAGTACAGTACCTA-TTATTAACAGGACGCACAG-CTTAAGGAGGAACCACATCAAATCTTCAGCCAGACATATCTAGCCTCAGAAGTGC-------------------------aaaa-------aaaaaaaaa-----aaaaaaaaGCCCCCA------AA----------CGAAGACACCCACATTGAGTAGGGTGCATGCCGTGAGTGCTGTAATCAAGATTAAAAAGACCTCAGTTTTTCTTTTTAGACTGTTGATAGTG---ACAATAACCATTATGCTTCCCCTAAAAGCTCTCAATTCAATGTCTGAAACATGAATGTTTTCATATCAAAAAGAACTGATGTACC--TGCCACCCTCTAAAAAGTTTAAGAATTACCCTGCAAACATTGCACTGATGAAGGCTGTCACG----ACTTA------CAGAGCCTAAGGAGGACCCAATGGCAGGCATCAGCAC--AGCTGAACACC---ACCTGGACCCCACTGCAGCCCTG--CCCACGCAGCT-----CTCACGGAGCAGACACAGTGCTCAAGTAATAAGCACAGATGGAGGAGAAACGAGAGGCTGTGGAAGGCAGGAGAGAAAGGCCGAGAGACGAGTTTGTAAGAATGCCAAAGTCACCTTCCC----CAG-------------TGTGGGAGGAAAATGC-------------------CA--AAGGCACTGGTTCTGCTGCCACAGGCAGTCTGAGCACCTGGAGTTGTGACGTCCTTCCAGGAGAGGTGCCACCAAGGAGCAGGAGGTTTGTCAAAGCTCTGGTCCCACCAACAAGAACCTCCCAAAGCAAAGCAGCCCCC-----ATTGAGGTTCCAAGGTCGTTTTGCTGAAGACGGGAACGAAA-CCAACACCAAAGCGACAGGGG--GTTGACAGA--GGGGACAGGGGCTGGGCACCGGCAACATGGAGCCGTTCAAGTAAACATAAACCACCAAATACTTAGAAAAGGCTTGTAAACGAGTGATCCGAAAGGTTCT---CTTTGCAGCATCTCTGATCAGCTGGCTAAAGAAAGGTGGGTGCTGAACC------------C-----------GTCTTTAGTG--------TTATCTG----TTTTGTGTTAAAGCACACGTGTGACACGGGCAGAGTGTGTGGGCCTGGGCCTGGATCGCATGCAGCCGTGGCCCTC-TGTCT-ACAAAGGAGGTGCTTCTGG-GTCCTGGTTC-CGGATCCTTCCCCTGCATGTTCATAGACGGACAGACTTCTACTTTCAGTCGCTAGAAAAGAGCTGAGCCTGGCGTCCCCTCAGGC-GGCCAGCTGCAGTCATCCACAGCACAGCATT------CTCCTAGAGCGGGCAGGCTGGAATCCACAGGACTTTATTTTGTTCTTGATTGACCATTGCCAAGATCTGAGTGCAAATGCTTGACAGGGCTCCTCCCTGGATGACCCCTGCAAAAGAG-CCCCCCAGACAC--G-----TCATTCAGCTCAGAG-TAAGA----CCCCAGGTTTGAGGCAAGGCAGTACAGCTTTCACTCTTTCTACTGTGT-GGCTGTCTGCTTTGTGCTCCTTGGCACTCTGCTCCATCCCCACCTGA--CTCTCCTTCACCAGCAAGAAACTGGG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76068017 2003 - 133410057 A--AGCT--------------GTCTCA---------------AGTTTAGAAATACAG-------GAAAGCT--------------GAC----CTACTAGGAAG--AGATTAAAAATTCGCATCTTCA-AGCACAGCC------------TTACAGAAATTGACCTTTATTTGTTGTACTAAAGCCTGTTTAACTTTTGATACAAAGTAACATTTTAGTACAGAAAATCCCAGTCTGTCAGCTCAGTACCTGTCTGTGCACACTGTACCATCTCAGTCCCACTCTGCCTACAACTTAGAAA-ACAGCCCCTACCCCCAGAGGGTCTGCGAGTTAATACCTTGAGAATAGTCTACAG---TTTTTCATAGTTTGTCTGAGCTA---GAAAACTTGTACCTGTAAAACAAAGGACAGCATTGAGGACTGAAACTTGTCTTTTTTTTG-------AACAACTGTGCAAGAAAATATATCCCTTTTT---AAAAAACATCAGTTATGGCTAAACTACAATCTAGTGTCTAGAATTACAAAGAATAAAATGAAATCAAAGATTTCTCGCTAGTAAAATGAAATGTTAGGAACAGTATTAAAATATAGGTCCTACCCC-ATGACACTTACACAGAGCCCAGTACAGTACCTA-TTATTAACAAGACGCACAG-CTTAAGGAGGAACCACATCAAATCTTCAGCCAGACATATCCAGCCTCAGAAGTGC-------------------------AATA-------AAAAAAAAA----------AAAGCCCCCA------AA----------CGAAGACACCCACATTGAGTAAGGTGCATGCCGTGAGTGCTGTAACCAAGATTAAAAAGACCT--GTTTTTCTTTTTAGACTGTTGATAGTGACAACAATAACCATTATGCTTCCCCTAAAAGCTCTCAATTCAATGTCTGAAACATGAATGTTTTCATATCAAAAAGAACTGATGTACC--TGCCACCCTCTAAAAAGTTTAAGAATTACCCTGCAAACATTGCACTGATGAAGGCTGCCACG----ACTTA------CAGAGCCTAAGGAGGACCCAATGGCAGGCATCAGCAC--AGCTGAACACC---ACCTGGACCCCACTGCAGCCCTG--CCCACGCAGCT-----CTCACAGAGCAGACACAGTGCTCAAGTAATAAGCACAGATGGAGGAGAAACGAGAGGCTGTGGAAGGCAGGAGAGAAAGGCCGAGAGACGAGTTTGTAAGAACGCCAAAGTCACCTTCCC----CAG-------------TGTGGGAGGAAAATGC-------------------CA--AAGGCACTGGTTCTGCTGCCACAGGCAGTCTGAGCACCTGGAGTTGTGACGTCCTTCCAGGAGAGGTGCCACCAAGGAGCAGGAGGTTTGTCAAAGCTCTGGTCCCACCAACAAGAACCTCCCAAAGCAAAGCAGCCCCC-----ATTGAGGTTCCAAGGTCGTTTTGCTGAAGACGGGAATGAAA-CCAATACCAAAGCGACAGGGG--GTTGACAGA--GGGGGCAGAGGCTGGGCACCGGCAACATGGAGCCGTTCAAGTAAACATAAACCACCAAATACTTAGAAAAGGCTTGTAAACGAGTGATCCGAAAGGTACT---CTTTGCAGCATCTCTGATCAGCTGGCTAAAGAAAGGTGGGTGCTGAACC------------C-----------GTCTTTAGTG--------TTATCTG----TTTTGTGTTAAAGCACACGTGTGACACGGGCAGAGTGTGTGGGCCTGGGCCTGGATCGCACGCAGCCGTGGCCCTC-TGTCT-ACAAAGGAGGTGCTTCTGG-GTCCTGGTTC-CGGATCCTTCCCCTGCATGTTCATAGACGGACAGACTTCTAATTTCAGTTGCTAGAAAAGAGCTGAGCCCGGCGTCCCCTCAGGC-GTCCAGCTGCAGTCATCCACAGCACAGCATT------CTCCTAGAGCGGGCAGGCTGGAATCCACAGGACTTTATTTTGTTCTTGATTGACCATTGCCAAGATCTGAGTGCAAATGCTTGACAGGGCTCCTCCCTGGATGACCCCTGCAAAAGAG-CCCCCCAGACACATG-----TCATTCAGCTCGGAG-TAAGA----CCCCAGGTTGGAGGCAACGCAGTACAGCTTGCACTCTTTCTACTGTGT-GGCTGTCTGCTTTGTGCTCCTTGGCACTCTGCTCCATCCCCACCTGACTCTCTCCTTCACCAGCAAGAAATTGGG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35010129 2010 + 104879549 A--AGCT--------------GTCTCA---------------AGTTTAGAAATACAG-------GAAAGCT--------------GAC----CGACTAGGAAG--AGATTAAAAACTCGCATCTTCA-AACACAACC------------TTACAGAAATTGACCTTTATTTGTTGTACTAAAACTTGTTTAACTTTTGATACAAAGTAACATTTTAGTACAGAAAATCCCAGTCTGTCAGCTCAGTACCTGTCTGTGCACACTGTACCATCTCAGTCCCACTCTGCCTGCAACTTAGAAA-ACAGCCCCTACCCCCAGAGGGTCTGCGAGTTAATACCTTGAGAATAGTCTACAG---TTTTTCATAGTTTGTCTGAGCTA---GAAAACTTGTACCTGTAAAACAAAGGACAGCATTGAGGACTGAAACTTGTCTCTTTTTTG-------AACAACTGTGCAAGAAAATATATCCCTTTTT---AAAAAACATCAGTTATGACTAAACTACAATCTAGTGTCTAGAATTACAAAGAATAAAATGAAATCAAAGATTTCTCACTAGTAAAATGAAATGTTAGGAACAGTATTAAAATATAGGTCCTACCCCAATGACACTTACACAGAGCCCAGTACAGTACCTA-TTATTAACAGGACGCACAG-CTTAAGGAGGAACCACATCAAATCTTCAGCCAGACATATCCAGCCTCAGAAGTGC-------------------------aaaa-------aaaaaaaaaaaaaaaaaaaaaaGCCCCCA------AA----------CGAAGACACCCACATTGAGTAAGGTGCATGCCGTGAGTGCTGTAACCAAGATTAAAAAGACCTCAGTTTTTCTTTTTAGACTGTTGATAGTGACAACAATAACCATTATGCTTCCTCTAAAAGCTCTCAATTCAATGTCTGAAACATGAATGTTTTCATATCAAAAAGAACTGATGTACC--TGCCACCCTCTAAAAAGTTTAAGAATTACCCTGCAAACATTGCACTGATGAAGGCTGTCATG----ACTTA------CAGAGCCTAAGGAGGACCCAATGGCAGGCATCAGCAC--AGCTGACCACC---ACCTGGACCCCACCGCAGCCCTG--CCCACGCAGCT-----CTCATGGAGCAGACACAGTGCTCAAGAAATAAGCACAGATGGAGGAGAAACGAGAGGCTGTGGAAGGCAGGAGAGAAAGGCC--GAGACGAGTTTGTAAGAATGCCAAAGTCACCTTCCC----CAG-------------TGCGGGAGGAAAATGC-------------------CA--AAGGCACTGGTTCTGCTGCCACAGGCAGTCTGAGCACCTGGAGTTGTGACGTCCTTCCAGGAGAGGTGCCACCAAGGAGCAGGAGGTTTGTCAAAGCTCTGGTCCCACCAACAAGAACCTCCCAAAGCAAAGCAGCCCCC-----ACTGAGGTTCCAAGGTCGTTTTGCTGAAGACGGGAACGAAA-CCAACACCAAAGCGACAGGGG--GTTGACAGA--GGGGGCAGGGGCTGGGCACCGGCAACATGGAGCCGTTCAAGTAAACATAAACCACCAAATACTTAGAAAAGGCTTGTAAACGAGTGATCCGAAAGGTTCT---CTTTGCAGCATCTCTGATCAGCTGGCTAAAGAAAGGTGGGTGCTGAACC------------C-----------GTCTTTAGTG--------TTATCTG----TTTTGTGTTAAAGCACACGTGTGACAGGGGCAGAGTGTGTGGGCCTGGGCCTGGATCGCACGCAGCCGTGGCCCTC-TGTCT-ACAAAGGAGGTGCTTCTGG-GTCCTGGTTC-CGGATCCTTCCCCTGCATGTTCATAGACGGACAGACTTCTACTTTCAGTCGCTAGAAAAGAGCTGAGCCCGGCGTCCCCTCAGGT-GGCCAGCTGCAGTCATCCACAGCACAGCATT------CTCCTAGAGTGGGCAGGCTGGAATCCACAGGACTTTATTTTGTTCTTGATTGACCATTGCCAAGATCTGAGTGCAAATGCTTGACAGGGCTCCTCCCTGGATGACCCCTGCAAAAGAG-CCCCCCAGACACATG-----TCATTCAGCTCGGAG-TAAGA----CCCCAGGTTTGAGGCAAGGCAGTACAGCTTGCACTCTTTCTACTATGT-GGCTGTCTGCTTTGTGTTCCTTGGCACTCTGCTCCATCCCCACCTGA----CTCCTTCACCAGAAAGAAATTGGG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73803984 1996 - 130959383 AGCAGCT--------------GTCTCA---------------AGTTTAGAAATACAG-------GAAAGCT--------------GAC----CGACTAGGAAG--AGATTAAAAACTCGCATCTTCA-AACACAACC------------TTACAGAAATTGACCTTTATTTGTTGTACTAAAGCCTGTTTAACTTTTGATACAAAGTAACATTTTAGTACAGAAAATCCCAGTCTGTCAGCTCAGTACCTGTGTGTGCACACTGTACCATCTCAGTCCCACTCTGCCTGCAACTTAGAAA-ACAGCCCCTACCCCCAGAGGGTCTGCGAGTTAATACCTTGAGAATAGTCTACAG---TTTTTCATAGTTTGTCTGAGCTA---GAAAACTTGTACCTGTAAAACAAAAGACAGCATTGAGGACTGAAACTTGTCTCTTTTTTG-------AACAACTGTGCAAGAAAATATATCCCTTTTT---AAAAAACATCAG-TATGGCTAAACTACAATCTAGTGTCTAGAATTACAAAGAATAAAATGAAATCAAAGATTTCTCGCTAGTAAAATGAAATGTTAGGAACAGTATTAAAATATAGGTCCTACCCCAATGACACTTACACAGAGCCCAATACAGTACCTA-TTATTAACAGGACGCACAG-CTTAAGGAGGAACCACATCAAATCTTCAGCCAGACATATCCAGCCTCAGAAGTGC----------------------------------------AAAAA-----AAAAAAAAG--CCCA------AA----------CGAAGACACCCACATTGAGTAAGGTGCATGCCGTGAGTGCTGTAACCAAGATTAAAAAGACCTTAGTTTTTCTTTTTAGACTGTTGATAGTG---ACAATAACCATTATGCTTCCCCTAAAAGCTCTCAATTCAATGTCTGAAACATGAATGTTTTCATATTAAAAGGAACTGATGTACC--TGCCACCCTCTAAAAGGTTTAAGAATTACCCTGCAAACATTGCACTGATGAAGGCTGTCACG----ACTTA------CAGAGCCTAAGGAGGACCCAATGGCAGGCATCAGCAC--AGCTGA-CACC---ACCTGGACCCCACCGCGGCCCTG--CCCACGCAGCT-----CTCACAGAGCAGACACAGTGCTCAAGTAATAAGCACAGATGGAGGAGAAACGAGAGGCTGTGGAAGGCAGGAGAGAAAGGCCGAGAGACGAGTTTGTAAGAACACCAAAGTCACCTTCCC----CAG-------------TGTGGGAGGAAAATGC-------------------CA--AAGGCACTGGTTCTGCTGCCACAGGCAGTCTGAGCACCTGCAGTTGTGACGTCCTTCCAGGAGAGGTGCCACCGAGGAGCAGGAGCTTTGTCAAAGCTCTGGTCCCACCAACAAGAACCTCCCAAAGCAAAGCAGCCCCC-----ATTGAGGTTCCAAGGTCGTTTTGCTGAAGACGGGAACGAAA-CCAACACCAAAGCGACA-GGG--GTTGACAGA--AGGGGCAGGGGCTGGGCACCAGCAACATGGAGCCGTTCAAGTAAACATAAACCACCAAATACTTAGAAAAGGTTTGTAAACGAGTGATCCAAAAGGTTCT---CTTTGCAGCATCTCTGATCAGCTGGCTAAAGAAAGGTGGGTGCTGAACC------------C-----------GTCTTTAGTG--------TTATCTG----TTTTGTATTAAAGAACACGTGTGACAGGGGCAGAGGGTGCGGGCCTGGGCCTGGACCGCACGCAGCTGTGGCCCTC-TGTCT-ACAAAGGAGGTGCTTCTGG-GTCCTGGTTC-CGGATCCTTCCCCTGCATGTTCATAGACGGACAGACTTCTACTTTGAGTCGCTAGAAAAGAGCTGAGCCTGGCGTCCCCTCAGGC-GGCCAGCTGCAGTCATCCACAGCACAGCATT------CTCCTAGAGCGGGCAGGCTGGAATCCACAGGACTTTATTTTGTTCTTGATTGACCATTGCCAAGATCTGAGTGCAAATGCTTGACAGGGCTCCTCCCTGGATGACCCCTGCAAAAGAG-ACCCCCAGACACATG-----TCATTCAGCTCAGAGTTAAGA----CCCCAGGTTTGAGGCAAGGCAGTACAGTTTGTACTCTTTCTACTGTGT-GGCTGTCTGCTTTGAGCTACTTGGCACTCTGCTCCATCCCCACCTGA--CTCTCCTTCACCAACAAGAAACTGGG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75365991 1999 - 133195287 AGCAGCT--------------GTCTCA---------------AGTTTAGAAATACAG-------GAAAGCT--------------GAC----CGACTAGGAAG--AGATTAAAAACTCGCATCTTCA-AACACAACC------------TTACAGAAATTGACCTTTATTTGTTGTACTAAAGCCTGTTTAACTTTTGATACAAAGTAACATTTTAGTACAGAAAATCCCAGTCTGTCAGCTCAGTACCTGTGTGTGCACACTGTACCATCTCAGTCCCACTCTGCCTGCAACTTAGAAA-ACAGCCCCTACCCCCAGAGGGTCTGCGAGTTAATACCTTGAGAATAGTCTACAG---TTTTTCATAGTTTGTCTGAGCTA---GAAAACTTGTACCTGTAAAACAAAGGACAGCATTGAGGACTGAAACTTGTCTCTTTTTTG-------AACAACTGTGCAAGAAAATATATCCCTTTTT---AAAAAACATCAG-TATGGCTAAACTACAATCTAGTGTCTAGAATTACAAAGAATAAAATGAAATCAAAGATTTCTCGCTAGTAAAATGAAATGTTAGGAACAGTATTAAAATATAGGTCCTACCCCAATGACACTTACACAGAGCCCAATACAGTACCTA-TTATTAACAGGACGCACAG-CTTAAGGAGGAACCACATCAAATCTTCAGCCAGACATATCCAGCCTCAGAAGTGC-------------------------------------AAAAAAAA-----AAAAAAAAG--CCCA------AA----------CGAAGACACCCACATTGAGTAAGGTGCATGCCGTGAGTGCTGTAACCAAGATTAAAAAGACCTTAGTTTTTCTTTTTAGACTGTTGATAGTG---ACAATAACCATTATGCTTCCCCTAAAAGCTCTCAATTCAATGTCTGAAACATGAATGTTTTCATATTAAAAGGAACTGATGTACC--TGCCACCCTCTAAAAGGTTTAAGAATTACCCTGCAAACATTGCACTGATGAAGGCTGTCACG----ACTTA------CAGAGCCTAAGGAGGACCCAATGGCAGGCATCAGCAC--AGCTGA-CACC---ACCTGGACCCCACCGCGGCCCTG--CCCACGCAGCT-----CTCACAGAGCAGACACAGTGCTCAAGTAATAAGCACAGATGGAGGAGAAACGAGAGGCTGTGGAAGGCAGGAGAGAAAGGCCGAGAGACGAGTTTGTAAGAACACCAAAGTCACCTTCCC----CAG-------------TGTGGGAGGAAAATGC-------------------CA--AAGGCACTGGTTCTGCTGCCACAGGCAGTCTGAGCACCTGCAGTTGTGACGTCCTTCCAGGAGAGGTGCCACTGAGGAGCAGGAACTTTGTCAAAGCTCTGGTCCCACCAACAAGAACCTCCCAAAGCAAAGCAGCCCCC-----ATTGAGGTTCCAAGGTCGTTTTGCTGAAGACGGGAACAAAA-CCAACACCAAAGCGACA-GGG--GTTGACAGA--GGGGGCAGGGGCTGGGCACCAGCAACATGGAGCCGTTCAAGTAAACATAAACCACCAAATACTTAGAAAAGGTTTGTAAACGAGTGATCCAAAAGGTTCT---CTTTGCAGCATCTCTGATCAGCTGGCTAAAGAAAGGTGGGTGCTGAACC------------C-----------GTCTTTAGTG--------TTATCTG----TTTTGTGTTAAAGAACACGTGTGACAGGGGCAGAGGGTGCGGGCCTGGGCCTGGACCGCACGCAGCTGTGGCCCTC-TGTCT-ACAAAGGAGGTGCTTCTGG-GTCCTGGTTC-CGGATCCTTCCCCTGCATGTTCATAGACGGACAGACTTCTACTTTGAGTCGCTAGAAAAGAGCTGAGCCTGGCGTCCCCTCAGGC-GGCCAGCTGCAGTCATCCACAGCACAGCATT------CTCCTAGAGCGGGCAGGCTGGAATCCACAGGACTTTATTTTGTTCTTGATTGACCATTGCCAAGATCTGAGTGCAAATGCTTGACAGGGCTCCTCCCTGGATGACCCCTGCAAAAGAG-ACCCCCAGACACATG-----TCATTCAGCTCAGAGTTAAGA----CCCCAGGTTTGAGGCAAGGCAGTACAGTTTGTACTCCTTCTACTGTGT-GGCTGTCTGCTTTGAGCTACTTGGCACTCTGCTCCATCCCCACCTGA--CTCTCCTTCACCAACAAGAAACTGGG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73230362 2008 - 125196307 AGCAGCT--------------GTCTCA---------------AGTTTAGAAATACAG-------GAAAGCT--------------GAC----CGACTAGGAAG--AGATTAAAAACTCGCATCTTCA-AACACAACC------------TTACAGAAATTGACCTTTATTTGTTGTACTAAAGCCTGTTTAACTTTTGATACAAAGTAACATTTTAGTACAGAAAATCCCAGTCTGTCAGCTCAGTACCTGTGTGTGCACACTGTACCATCTCAGTCCCACTCTGCCTGCAACTTAGAAA-ACAGCCCCTACCCCCAGAGGGTCTGCGAGTTAATACCTTGAGAATAGTCTACAG---TTTTTCATAGTTTGTCTGAGCTA---GAAAACTTGTACCTGTAAAACAAAGGACAGCATTGAGGACTGAAACTTGTCTCTTTTTTG-------AACAACTGTGCAAGAAAAtatatcccttttt---aaaaaacatcagtTATGGCTAAACTACAATCTAGTGTCTAgaattacaaagaataaaatgaaatcaaagattTCTCGCTAGTAAAATGAAATGTTAGGAACAGTATTAAAATATAGGTCCTACCCCAATGACACTTACACAGAGCCCAGTACAGTACCTA-TTATTAACAGGACGCACAG-CTTAAGGAGGAACCACATCAAATCTTCAGCCAGACATATCCAGCCTCagaagtgc-------------------------aaaa-------aaaaaaaaa-----aaaaaaaag--tcca------aa----------cgAAGACACCCACATTGAGTAAGGTGCATGCCGTGAGTGCTGTAACCAAGATTAAAAAGaccttagtttttctttttagactgtTGATAGTGACAACAATAACCATTATGCTTCCCCTAAAAGCTCTCAATTCAATGTCTGAAACATGAATGTTTTCATATTAAAAGGAACCGATGTACC--TGCCACCCTCTAAAAGGTTTAAGAATTACCCTGCAAACATTGCACTGATGAAGGCTGTCACG----ACTTA------CAGAGCCTAAGGAGGACCCAATGGCAGGCATCAGCAC--AGCTGA-CACC---ACCTGGACCCCACCGCGGCCCTG--CCCACGCAGCT-----CTCACAGAGCAGACACAGTGCTCAAGTAATAAGCACAGATGGAGGAGAAACGAGAGGCTGTGGAAGGCAGGAGAGAAAGGCCGAGAGACGAGTCTGTAAGAACACCAAAGTCACCTTCCC----CAG-------------TGTGGGAGGAAAATGC-------------------CA--AAGGCACTGGTTCTGCTGCCACAGGCAGTCTGAGCACCTGCAGTTGTGACGTCCTTCCAGGAGAGGTGCCACCAAGGAGCAGGAGCTTTGTCAAAGCTCTGGTCCCACCAACAAGAACCTCCCAAAGCAAAGCAGCCCCC-----ATTGAGGTTCCAAGGTCGTTTTGCTGAAGACGGGAACGAAA-CCAACACCAAAGCGACA-GGG--GTTGACAga--gggggcaggggctgggcaccAGCAACATGGAGCCGTTCAAGTAAACATAAACCACCAAATACTTAGAAAAGGTTTGTAAACGAGTGATCCAAAAGGTTCT---CTTTGCAGCATCTCTGATCAGCTGGCTAAAGAAAGGTGGGTGCTGAACC------------C-----------GTCTTTAGTG--------TTATCTG----TTTTGTGTTAAAGAACACGTGTGACAGGGGCAGCGGGTGCGGGCCTGGGCCTGGATCGCACGCAGCTGTGGCCCTC-TGTCT-ACAAAGGAGGTGCTTCTGG-GTCCTGGTTC-CGGATCCTTCCCCTGCATGTTCATAGACGGACAGACTTCTACTTTGAGTCGCTAGAAAAGAGCTGAGCCTGGCGTCCCCTCAGGC-GGCCAGCTGCAGTCATCCACAGCACAGCATT------CTCCTAGAGCGGGCAGGCTGGAATCCACAggactttattttgttcttgattGACCATTGCCAAGATCTGAGTGCAAATGCTTGACAGGGCTCCTCCCTGGATGACCCCTGCAAAAGAG-ACCCCCAGACACATG-----TCATTCAGCTCAGAGTTAAGA----CCCCAGGTTTGAGGCAAGGCAGTACAGTTTGCACTCTTTCTACTGTGT-GGCTGTCTGCTTTGAGCTACTTGGCACTCTGCTCCATCCCCACCTGA--CTCTCCATCACCAACAAGAAACTGGG i papAnu2.chr9 C 0 I 324 s chlSab2.chr9 72062392 2007 - 125710982 AGCAGCT--------------GTCTCA---------------AGTTTAGAAATACAG-------GAAAGCT--------------GAC----CCACTAGGAAG--AGATTAAAAACTCGCATCTTCA-AACACAACC------------TTACAGAAATTGACCTTTATTTGTTGTACTAAAGCCTGTTTAACTTTTGATACAAAGTAACATTTTAGTACAGAAAATCCCAGTCTGTCAGCTCAGTACCTGTGTGTGCACACTGTACCATCTCAGTCCCACTCTGCCTGCAACTTAGAAA-ACAGTCCCTACCCCCAGAGGGTCTGCGAGTTAATACCTTGAGAATAGTCTACAG---TTTTTCATAGTTTGTCTGAGCTA---GAAAACTTGTACCTGTAAAACAAAGGACAGCATTGAGGACTGAAACTTGTCTCTTTTTTG-------AACAACTGTGCAAGAAAATATATCCCTTTTT---AAAAAACATCAGTTATGGCTAAACTACAATCTAGCGTCTAGAATTACAAAGAATAAAATGAAATCAAAGATTTCTCGCTAGTAAAATGAAATGTTAGGAACAGTATTAAAATATAGGTCCTACCCCAATGACACTTACACAGAGCCCAGTACAGTACCTA-TTATTAACAGGACGCACAG-CTTAAGGAGGAACCACATGAAATCTTCAGCCAGACATACCCAGCCTCAGAAGTGC-----------------------aaaaaa-------aaaaaaaaa-----aaaaaaaGG--CCCA------AA----------CGAAGACACCCACATTGAGTAAGGTGCATGCCGTGAGTGCTGTAACCAAGATTAAAAAGACCT--GTTTTTCTTTTTAGACTGTTGATAGTGACAACAATAACCATTATGCTTCTCCTAAAAGCTCTCAATTCAATGTCTGAAACATGAATGTTTTCATATTAAAAGGAACTGATGTACC--TGCCACCCTCTAAAAGGTTTAAGAATTACCCTGCAAACATTGCACTGATGAAGGCTGTCACG----ACTTA------CAGAGCCTAAGGAGGACCCAATGGCAGGCATCAGCAC--AGCTGA-CACC---ACCTGGACCCCACCGCGGCCCTG--CCCACGCAGCT-----CTCACAGAGCAGACACAGTGCTCAAGTAATAAGCACAGATGGAGGAGAAACAAGAGGCTGTGGAAGGCAGGAGAGAAAGGCCGAGAGACGAGTTTGTAAGAACACCAAAGTCACCTTCCC----CAG-------------TGTGGGAGGAAAATGC-------------------CA--AAGGCACTGGTTCTGCTGCCACAGGCAGTCTGAGCACCTGCAGTTGTGACGTCCTTCCAGGAGAGGTGCCACTAAGGAGCAGGAGCTTTGTCAAAGCTCTGGTCCCACCAACAAGAACCTCCCAAAGCAAAGCAGCCCCC-----ATTGAGGTTCCAAGGTCGTTTTGCTGAAGACGGGAACGAAA-CCAACACCAAAGCGACA-GGG--GTTGACAGA--GAGGGCAGGGGCTGGGCACCAGCAACATGGAGCCGTTCAAGTAAACATAAACCACCAAATACTTAGAAAAAGTTTGTAAACGAGTGATCCAAAAGGTTCT---CTTTGCAGCATCTCTGATCAGCTGGCTAAAGAAAGGTGGGTGCTGAACC------------C-----------GTCTTTAGTG--------TTATCTG----TTTTGTGTTAAAGAACACGTGTGACAGGGGCAGAGGGTGCGGGCCTGGGCCTGGATCCCACGCAGCTGTGGCCCTC-TGTCT-ACAAAGGAGGTGCTTCTCG-GTCCTGGTTC-TGGATCCTTCCCCTGCATGTTCATAGACGGACAGACTTCCACTTTGAGTCGCTAGAAAAGAGCTGAGCCTGGCGTCCCCTCAGGC-GGCCAGCTGCAGTCATCCACAGCACAGTGTT------CTCCTAGAGCGGGCAGGCTGGAATCCACAGGACTTTATTTTGTTCTTGATTGACTATTGCCAAGATCTGAGTGCAAATGCTTGACAGGGCTCCTCCCTGGATGACCCCTGCAAAAGAG-ACCCCCAGACACATG-----TCATTCAGCTCAGAG-TAAGA----CCCCAGGTTTGAGGCAAGGCAGTACAGTTTGCACTCTTTCTACTGTGT-GGCTGTCTGCTTTGAGCTACTTGGCACTCTGCTCCATCCCCACCTGA--CTCTCCTTCACCAACAAGAAACTGGG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75519955 1992 - 121768101 AGAAGCT--------------GTCTCA---------------AGTTTAGAAATATGA-------GAAAGCA--------------GAG----CGAATAGGAAG--AGATGAAAAACTTGCATCTTCA-AACATAACC------------TTACAGAAATTGACCTTTATTTGTTGTACTAAAGCCTGTTTAACTTTTGATACAAAGTAACATTTTAGTACAGAAAATCCCAGTCTGTCAGCTCAGTACCTGTCTGTGCACACTGTACCATCTCAGTCCCACATTGCCTGCAACTCAGAAA-GCAGCCCCTGCCCCCAGAGGGTCTGTGAGTTAATACCTTAGGAATAGTCTACAG---TTTTTCATAGTTTGTCTGAGCTA---GAAAACTTGTACCTGTAAAACAAAGGACAGCATTGGGGACTGAAACTTGTCTCTTTTTTG-------AACAACTGTGCAAGAAAATATATCCCTTTTT----AAAAACGGCAGTTATGGCTAAACTACAATCTAGTGTCTAGAATTACAAAGAATAAAATGAAATCAAGGATTTCTCACTAGTAAAATGAAATGTTAGGAACAGTATTAAAATATAGGTCCTACCCCAATGACACTTACACAGAGCCCAGTACAGTACCTA-TTATTAACAGGACGCACAG-CTTAAGGAGGAACCACATCAAATCTTCAGCCAGACATATCCAGCCTCAGAAGTGC-------------------------------------------AA-----AAAAAAAAGCCCCCA------AA----------CAAAGACACCCACATGGAGTAAGGTGCATGCCGTGAGTGCTGTAACCAAGATTACGAAGACCTCAGTTTTCC--TTTAGATTGCTGATGGTGATCACACTAACCATTATGCTTCCCCGAAAAGCTCTCGATTCAACGTCTGAAATATGAATGTTTTCATATCAAAAAGAACTGATGTACC--TGCCACCCTCTATAAAGTTTAAGAATTACCCTGCAAACATTGCACTGATGAAGGCTGTCACGACTTACTTA------CAGAGCCTAAGGAGGACCCGATGGCAGGCATCAGCAC--AGCTGAACACC---GCCAGGA-CCCACCACGG-CCTG--CCCACATAGCT-----CTCACGGAGCAGACACAGTGCTCAAGCAATAAGCACAGATGGAGTAGAAACAAGAGGCTGTGGAAGGCAGGAGAGAAAGGCCGAGAGACGACTTTGTAAGAACATCAAAGTTGCCTTCCC----CAG-------------TATGGGAGGAAAATGC-------------------CA--AAGGCACTGGTTCTGCTGCCAGAGGCAGTCTGAGCACCTGCAGTTGTGAAGTCCTTCCAGGAAAGGTGCCACCGAGGAGCAGGAGGTTTGTCAAAGCTCTGGTCCCACCGACAAGAACCTCCCAAAGCAAAGCAGCCCCC-----ATTGAGGTTCCAAGGTCGTTTTGCTGAAGACGGGAACAAAA-TCCATACCAAAGCGAT--GGG--GCTGACAGA--GGGG-CAGGGGCTGGGCACCGGCAACATGGGGCCGTTCAAGTAAACATAAACCACCAAATACTTAGAAAAGGCTTGTAAACGAGTGATCCGAAAGGTTCT---CTTTGCAGCATCTCTGATCAGCTGGCTAAAGAAAGGTGGGTGCTGAACCCCTGTAATCCAAC-----------GTCTTTAGTG--------TTATCTG----TTTTGTGTTAAAGCACGCGTGTGAC--GGGCAGAGTGTGCGGGCCTGGGCCTGGATCACAAGCAGCCATGGCCTTCTTGTCT-ACAAAGGAGGTGCTTCTGG-GTCCTGGTTC-TGAATCCTTCCCCTGCATGTTCACAGACGGACAGACTTCTACTTCTAGTCACTAGAAAAGAGCTGAGCCTGGCGTCCCCTCAGGC-GGCCTGCTGCAGGCATCCATAGCACGGCATT------CTTCTAGAGCGGGCAGGCTGGAATCCACAGGACTTTATTTTGTTCTTGATTGACCATTGCCAAGATCTGAGGGCAAATGCTCGACAGGGCTCCTCCCTGGATGACTCCTGCAAAAGAGCCCCCCCAGACACATG-----TCACTGAGCTCGGAA-TAAGA----CCCCGGGTTTGAGGCAAGTCAGTAGAGCCTGCACTCTTTCTACTGCAT-GGCTGTCTGCTCTGAGCTCCTTGGCACTCTGCCCCATCCCTACCTGA--CTCTCCTTTA---------------- i calJac3.chr12 C 0 C 0 s mm10.chr14 24133820 2013 + 124902244 AGCAGCTCCGCAAGGCTTCTAGTCCCAGAGCTGCAGAGGCCTGGTTCTGGGATAAAGGCCAGGAGAGAGAA--------------GACGCTACAAACAGGGTG--AGCAGGAGGAGGAGCTGCCTCC-ACCAGGGTCTACACACAGGGATTACACAAACTGACCTTTATTTGTTGAACTGAAGTCTGTTTTGTTTGCGATACAAAGTAACATTTTAGTCCAGCATGTCCCA-CCTGTCAGATCCATACCTGCC--TCCTCGCTGAAC-------ACCGAACAGGGCCTATGACCAGGGAA-ATAGCCCCTGTCCT--GTAACTGTGCAGAGTAAGACCTTGAGCGTGGTCTGCGGTTTTTTTTCCTCAGTTGTCTGAGCTA---GAAAATTCGTGCCTGTAAGGCACAGAACAGCCTTGAGGGCTGCAAC-TGTCTCTCTCTCGCCCCTTAAACAGCTGTGCAAGAAAATATATCCCTTTTTTAAAAAAAATGTCGATAATAGCCAAACTACAATCTAATGTCTAGAGTTACAAAGAATAAAATGAAATCAAAGATTTCTTGCTAGTAAAATGAAATGTTAGGAACAGTATTAAAATATAGGTACCACCCCAGTGAC----ACACGGAACCCAGTACAGTACC----TATTAACAGGACACACAA-TTGAAGAAGGGACTGAATCCGCTCTTTAG-CAGATAGGTCGGGCATCAGAAGTGCGGTGAGGGGAGGGGGTGGGGGATAAAAAATAGATTGAAAAACAAA-----AACAGAAAA--CCTAACAAAGAA----------TGGGGATATCCTTGTGGAAT------CAAGCTGAGAATGTTGTAATCAAGATGAAAAAGCTCCCAGGTTTTCTTCTTA------------TG---AGTCTGACCATTGTAC--CCACTAGAAGCTCTCATTTCAAAGTCTGTGACATGAATAGTTTTATGCCAGAAAGAGCTGCTACATCAATGCCA-----------GAGTAAGGGTTACCTTGC-AACCTTGCACTGACAAAGGCTGCCT------GCCTAGCATCTCAGAGCCTATGG-GGAAGCAATGGCA-----------------------C---ACCCATGCCC---------CCTG--CTGAGGAAGTCAAGGACTGACTAAACTG---TGATGCTTAAATATAAACTGCAGCTGGGGAAGAAACAAGAGGCCAAGG-AGGCAG--GAGAAAGGCCGAGAGGTGAATCTGCAAGAACGCCAAAGCTGCCTTTCC----AGGGAGGGAGTGCTGCCGTGGCAAGATGGCCC-------------------CACCAAGGCACTGGTTCTGGTACCAACAGTGGTCTGAGCACCTGCAGTTGTTATGT-CTTCCAGGGGAGGGGCCACCAAGAAGCAGGAGGTCTGTCAAAGCTCTGGTCCCACTGACAGGAACCTCCTGTAGCAAAGCATCCCCCTACCGCATGAGATTCCAGAATTGTCCTGCCCAAGACAG----------TAACATCAAACCAACA-GGG--AGGAACGGGGCGGGGTCAGGGGCTGGGCACCG---ATGTGGAGCCATTCAAGTAAACATAGACAACCAGATACTTAGAAAAGGCTTGTAAACTTGTGATCAGGAAGGTCCTGGGCACAGCAGCACCTCTGCTGGGCTGGCTATGGGATGGT----------CA------------A-----------GTCTTTTGTG--------TT-TCTGCTTTTTTTGTTTTAAAGCGCACATGTGAGTAGTGCTGTCCACCAG---CTGGGCCCAAATCT-------TTGTGGCTCTC-CGTCCAACGAAGGAAGTGTTCCTGGAGTCCTGGTTC-TGGGTCCTTCCCA-ACTTGTCCATAGACAGACAGAC--AGACTTCTACTGACTGGAAAAGAGCC--GCCAGCTGTCCGCACCGTC-CACTCA-TGGAGGTGCCTCTGGCAGAGCTTT------CTGCTAGGGTGGGCAAGCGGGGATCCACAGGACTTTACTTTGTTCTTGACTGACCATGGCCAGGATCTGAGTGCAAATGCTGGACAGGGCTCCACCCTGGACAACCCCTGCGGAGAAG-CCCAGCAAACACAAGCAGGTTAGGTCAGCTCGTCG-TAAGACGGTCCCCACCACTAAGGGAAATGGGCACAGCCTGT----TCTCTCCTGCTT-GCTTGTCTGC---GGGCCTCTTGACTTTC--------CCTGACATGA--CTCCTGCTT-TCAGCAGGAAACCGGG i mm10.chr14 C 0 I 1 s canFam3.chr4 27687130 2023 + 88276631 --AAGCA--------------GGCTCC---------------CACTTAGGAATGAGA-------GAGAGCTGGGGGGGGGGCAGGGAA----CACACGGGAAGCCAATTTTAAAACAGGTATCTTCATGACAAG---------------TTACAGAAATTGACCTTTATTTGTTGTACTAAAGTCTGTTTAACTTTTGATACAAAGTAAGGTTTTAGTACAGAAAATCCCAGTCTGTCAGAACAGTACCTG----TGCACACTGTACCATCACAGTCCCGCCCGGGCCGCGGCTCAGAGACGCAGCCCC--------GAGGG-CGCCGAGCAGGCCCCCAG---CCAGCCCACCG---TCTGTT---GGTGGTCTGAGCTAGAGGAAGGCGTGTACCTGTGAAATGAAGGGCAGAGCTGAGGACTGACACACATCTCTGT---G-------AACACCTGTGCAAGAAAATAGATCCCTTTA----AAAAAAAAAAAATGTCAGCTACGCTACAATCTAGTGTCTAGAATTACAAAGAATAAAATGAAATCAAAGATTTCTTGCTAGTAAAATGAAATGTTAGGAACAGTATTAAAATATAGGTCCTACCCCAGTGAC----ACACGGAGCCCAGTACAGTACCTATTTATTAACAGGACGCACAGTTTTAAGGAGGAACCACATCAAATCTTCAGCCAGAGATATCCAGCATCAGAAGTGC-----------------------aaaaaa-------aaaaaaaaa-----aaaaaaaaaTTCCCA------AAAACAAAACCCCAAAGACGTCCTTGTGGGGTACTGTTTATGCCAGGAGTGCTGTCACCGAGACTAGA---TCCCCAGCTT--------------CTGAGAGCGGGGACACTCATCATGACACTTCCCCTAAGAGCTCGCAGTTCCCAGTCTGAAACATGAGCATCTTCCCATCAGAGAGAGCTGGTGTGCC--TGCCCCCGTCTATGGAGTTTAAGAATTACCCTGCAAAAATTGCACTGA-AAAAGCGGTCACT----ATTTA------CAGAAGCTAAGGAGGACCCAGTGGCACGTGCCAGCCCTTGGTTAA-CACCCTGCCCAGGACAACGGCACGGCGGTGACCTCAGGGAGCC-----CGGACGGCCCAGGTAGCAGGCGGACGTAACAATAGCAGACAGAGAAGAAATGAGAGGACACGGAGGGCAGGAGACAAAGCCTG-----CAAGCTTGCAAG-ACGCCCAAGTGGCCTTCCTGGCGCAG-------------GAGGGGAGGACACGGCCGCTGGTGCCTCCGCCCCACA--AAGGCACTGGTCCTGCTACCACAGCACGTCTGAGCCCCTGCCGTCACGGTGTCCTTCCAGGAGAGGTGCCACCGGGGAGCGGGAAGTGTCTTGAAGCCCTGGTCCCACTGACAAGAACCTCCCAGAGCAGAGTGGCCCCC-----AGCGAGGTTCCAGAGTTGTTTTGCTGAAAGCAGGAACGAAACCCAACACCAAAGCAACACGGGACGTTGACAGG--GGAGGGCAGGGCTGGGCACCGGCAACATGGAGCCGTTCAAGTAAACATAAACAACCA-ATACTTAGAAAAGGCTTGTAAACTTGTGATCTGAAAGGTTCT---CTTTGCAGCATCTCTGGTGAGCTGGCTAAAGAAAGGGTGGTGTTGAACC------------CCTCTATCAAAAGTCTTTTGTGGTTTTTTTTTTTTTG----CTTTGTCTTAAAGCACATGTGTGAGAGGAACAG--TCTTCTGGCCTGAGCCCGGATCCCGTTCACCTGTGGCCCTC-GAGCT-ACAGAGGGGGTGCTTCTGGAGTCCATGTGCGTGGATCCTTCCCCTCTGTGTTTATATACAGATAGACGTGGACTTTCAATCGCTAAGAAGGAGCTGGGCCAGACGTTTAGGCCGGCAGACAAGCCGCAGCCACTCCCGGCATGGCAATGGCACCCTTCTACAGCGGGCAGGCTGGAATCCACAGGACCTTATTTTGTTCTTGATTGACCATTGCCAAGATTTGAGTGCAAATGCTCGACAGGGCTCCTCCCTGGATGACCCCTGCAAAAGAG--CCCCCAAACACACA-----TCACTGAGCTCAGAG-TCTGA----CCCCAGGATGCAGGCAA------ATAAAATACAC--------CTGTTTAGGTTTCCTGATGGGAGCTACTTGGC---CTG-------CCTTCCTCG--CTCTCTTCCATCAGCAAGAAATCGGG i canFam3.chr4 I 669 C 0 a score=368575.000000 s hg38.chr10_KI270825v1_alt 31400 132 + 188315 AAAGAA--------AATTG-------------------------------------CCCCTCTTGAGTTGATC---------------------ACTCATATGTAAACTG--------------------------------------------------CCCACCCCACTGCAGTTA-----ACACCCTGGGTTGGGTTTGCAATGG-TT----GGGGGAATC----CCAGGGCATCAGAAGGAAGTTTGGAGGACATGTG s panTro4.chr10 76402011 132 + 133524379 AAAGAA--------AATTG-------------------------------------CCCCTCTTGAGTTGATC---------------------ACTCATATGTAAACTG--------------------------------------------------CCCACCCCACCGCAGTTA-----ACACCCTGGGTTGGGTTTGCAATGG-TT----GGGGGAATC----CCAGGGCATCAGAAGGAAGTTTGGAGGACATGTG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76070020 133 - 133410057 AAAGAA--------AATTG-------------------------------------CCCCTCTTGAGTTGATC---------------------ACTCATATGTAAACTG--------------------------------------------------CCCACCCCACTGCAGTTA-----ACACCCTGGGTTGGGTTTGCGATGGTTT----GGGGGAATC----CCAGGGCATCAGAAAGAAGTTTGGAGGACATGTG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35012139 132 + 104879549 AAAGAA--------AATTG-------------------------------------CCCCTCTTGAGTTGATC---------------------ATTCATATGTAAACTG--------------------------------------------------CCCACCCCACTGCAGTTA-----ACACCCTGGGTTGGGTTTGCGATGG-TT----GGGGGAATC----CCAGGGCATCAGAAAGAAGTTTAGAGGACATGTG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73805980 131 - 130959383 AAAGAA--------AATTG-------------------------------------CCCCTTGTGAATTGATC---------------------ACTCACATATAAACTG--------------------------------------------------CCCACCCCACTGCAG-TA-----ATACCCTGGGTTGGGTTTGCGATGG-TT----GGGGGAATC----CCAGGGCATCAGAAAGAAGTTTGGAGGACATGTA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75367990 131 - 133195287 AAAGAA--------AATTG-------------------------------------CCCCTCGTGAATTGATC---------------------ACTCACATATAAACTG--------------------------------------------------CCCACCCCACTGCAG-TA-----ATACCCTGGGTTGGGTTTGCGATGG-TT----GGGGGAATC----CCAGGGCATCAGAAAGAAGTTTGGAGGACGTGTA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73232694 131 - 125196307 aaagaa--------aattg-------------------------------------ccccTCGTGAATTGATC---------------------ACTCACATGTAAACTG--------------------------------------------------CCCACCCCACTGCAG-TA-----ATACCCTGGGTTGGGTTTGCGATGG-TT----GGGGGAATC----CCAGGGCATCAGAAAGAAGTTTGGAGGACATGTA i papAnu2.chr9 I 324 C 0 s chlSab2.chr9 72064399 131 - 125710982 AAAGAA--------AATTG-------------------------------------CCCCTCGTGAATTGATC---------------------ACTCACATGTAAACTG--------------------------------------------------CCCACCCCACTGCAG-TA-----ATACCCTGGGTTGGGTTTGCGATGG-TT----GGGGGAATC----CCAGGGCATCAGAAAGAAGTTTGGAGGACATGTA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75521947 129 - 121768101 --AGAA--------AATGG-------------------------------------CCCCTGGTGAGTTGACC---------------------GCTTACATGTGAACTG--------------------------------------------------CCCAGCCCACTGCAG-TA-----ACACCCTGGGTTGGGGCTGCGATAG-TT----GGGGGAATC----CCCGGACATCAGGAAGAAGTTTGGGGAGCATGTG i calJac3.chr12 C 0 C 0 s mm10.chr14 24135834 129 + 124902244 AAAGGAGAGACCCCAGTCA-------------------------------------CCTGGATTCAGTTGACG---------------------GCTCACA----AACTC--------------------------------------------------CCTACCACAGTG---------------CCTGGGCAGGGGAGGCAGAGG-CT----GGCATGCCCTGTACTGGGGACTGAAGAAGCAGCCTGG-GGGCATGTG i mm10.chr14 I 1 I 299 s canFam3.chr4 27689153 247 + 88276631 GAAGAA--------AAGTAAGAGTCAAGTGCAAATAACTTTGGCTTTTTATCTGTCCCTCTGCTCAGCTGTTCGGTAGGATACTGACAACGTGGGCTCACATGAAGGCTGGGGTTAAATTTTGTCAGGTTTTGGAGCCCCTGTAACAGGGACGATCAGGATCTGACCACTCGCAT-TAACTGCACGCCCCGCGCTGGGTCTTCCCAGT-CTTCCAAGGGGGCGT----CTGGCACCCCGGAAAGCAGTCTGG-GGTTATGCA i canFam3.chr4 C 0 C 0 a score=1557372.000000 s hg38.chr10_KI270825v1_alt 31532 539 + 188315 GCGGTGGTCTAATCATTAGCAGGATTCTGCAGGAA---ACGACAAGTTTAAGGAGCCAGATAGCTCATGGCCAAGAGGAGAGTCACAGAAAGATGATG-GCGCCAACT-TGGGCCAGCCCTGTACTA---TAGGAGTTTGACAAA--GGGGTCTATAGACACCAGGCCAGGGGTACTCC--AGTGTGCTCCACATAACAGCACCTGGACACAAACCAAGCC----CCTActgcaacaaggcatgctcagaaattgacagtgagtgtctaga--------------aac----------------tgctatggaaacaggac-gtcgtaattttatgtctgttgaatctaacaagaaaaaaatagagcttaccttttgcaagacttagagtttt-aaattttcatctctctaggaattgtcagtgtatttggctaaataccagtctgtgaggaattggaaatgaaaGTTcacacacaca--c----------ccacacacac-acacacacaGAGGCATG------CACACC------TGCACATACCTACACACACATGGGCACCAAGCCCAGGTCCCTGGACTAGATCATAACACTCTCCACAATGCAGTT s panTro4.chr10 76402143 535 + 133524379 GCGGGGGTCTAACCATTAGCAGGATTCTGCAGGAA---ACGACAAGTTTAAGGAGCCAGATAGCTCATGGCCAAGAGGAGAGTCACAGCAAGATGATG-ACACCAACT-TGGGCCAGCCCTGTACTA---TAGGAGTTTGACAAA--GGGGTCTATAGACACCAGGCCAGGGGTACTCC--AGTGTGCTCCACATAACAGCACCTGGACACAAACCAAGCC----CCTActgcaacaaggcatgctcagaaattgacagcgagtgtctaga--------------aac----------------tgctatggaaacaggat-gtcgtaattttatgtctgttgaatctaacaagaaaaaaatagagcttaccttttgcaagacttagagtttt-aaatttgcatctctctaggaattgtcagtgtatttggctaaataccagtctgtgaggaattggaaatgaaaGTTcacacataca--c--------------acacac-acacacacggaggcatg------cacacc------tgcacatacctacacacacaTGGGCACCAAGCCCAGGTCCCTGGACTAGATCATAACACTCTCCACAATGCAGTT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76070153 555 - 133410057 GCGGTGGTCTAATCATTAGCAGGATTCTGCAGGAA---ACGACAAGTTTAAGGAGCCAGATAGCTCATGGCCAAGAGGAGAGTCACAGCAAGATGATG-ACTCCAACT-TGGGCCAGCCCTGTACTA---TAGGAGTTTGACACA--GGGGCCTATAGACACCAGGCCAGGGGTACTCC--AGTGTGCTCCACATAACAGCACCTGGACACAAACCAAGCC----CCTActgcaacaaggcacgctcagaaattgacagtgagtgtttaga--------------gac----------------tgctatggaaaagggac-gtcgtaattttatgtctgttgaatctaacaagaaaaaaacagagcttaccttttgcaagatttagagttct-aaattttcatctctctaggaattgtcagtgtatttggctaaataccagtctgtgagggattggaaatgaaaGTTcacacacata--cacacacacacacacacacac-acacacacagaggcatg------cacacctgcacatgcacatacctacacacacacGGGCACCAAGCCCAGGTCCCTGGACTAGATCATAACACTCTCCACAATGCAATT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35012271 531 + 104879549 GTGGTGGTCTAATCATTAGCAGGATTCTGCAGGAA---ACTACGAGTTTAAGGAGCCAGATAGCTCATGGCCAAGAGGAGAGTCACAGCAAGATGATG-ACTCCAACT-TGGGCCAGCCCTGTACTA---TAGGAGTTTGACACA--GGGGTCTATAGACACCAGGCCAGGGGTACTCC--AGTGTGCTCCACATAACAGCACCTGGACACAAACCAAGCC----CCCAcctcaacaaggcacgctcagaaattgacagtgagtgtttaga--------------aac----------------tgctatggaaatgggac-atcgtaattttatgtctgttgaatctaacaagaaaaaaacagagcttaccttttgcaagattt--agtttt-aaattttcatctctctaggaattgtcagtgtatttggctaaataccagtctgtgaggaattggaaatgaaaGTTcacacacaca--c-----------------------acacaaacaggcatg------cacacctgcacatgcacatacctacacacacacGGGCACCAAGCCCAGGTCCCTGGACTAGATCATAACACTCTCCACAATGCAATT i nomLeu3.chr18 C 0 I 970 s rheMac3.chr9 73806111 554 - 130959383 GCGGTGGTCTAATCGTTAGCAGGATTCTGCAGGAA---ACGACCAGTTTAAGGAGCCAGACAGCTCATGGCCAAGAGGAGAGTCACAGCACGATGATG-ACTCCAACT-CGGGCCAGCTCTGTACTA---TAGGAGTTTGACGCT--GGGGTCTATAGACAGCAGGCCAGGGGAACTCC--AGTGTGCTCCACAGAACAGCACCTGGACACAAACCAAGCC----CCCACTGCAACAAGCCACGCTCAGAAACTGACAGTGAGTGTTTAGAAATGGGACGTTTCTAAC------------GGAGTGCTATGGAAACGGGAC-GTCgtaattttatgtctgttgaatctaacaagaaaaaaatggagcttaccttttccaagttttagagttttaaaattttcatctctctaggaattgtcagtgtatttggctaaataccagtctatgaggaattggaaatgaaaGTacacatatgcg--c---------------------gcacacacacaggcatg------cacacctgcacatgcacatacctacacacacacGGGCACCAAGTCCAGGTCCCCGGACTAGATCATAACACTCTCCACAATGCAATT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75368121 554 - 133195287 GCGGTGGTCTAATCGTTAGCAGGATTCTGCAGGAA---ACGACCAGTTTAAGGAGCCAGACAGCTCATGGCCAAGAGGAGAGTCACAGCACGATGATG-ACTCCAACT-CGGGCCAGCTCTGTACTA---TAGGAGTTTGACGCT--GGGGTCTATAGACAGCAGGCCAGGGGAACTCC--agtgtgctccacagaacagcacctggacacaaaccaagcc----cccactgcaacaagccacgctcagaaactgacagtgagtgtttagaaatgggacgtttctaac------------ggagtgctatggaaacgggac-gtcgtaattttatgtctgttgaatctaacaagaaaaaaatggagcttaccttttccaagttttagagttttaaaattttcatctctctaggaattgtcagtgtatttggctaaataccagtctgtgaggaattggaaatgaaaGTacacatatgcg--c---------------------acacacacacaggcatg------cacacctgcacatgcacatacctacacacacacGGGCACCAAGTCCAGGTCCCCGGACTAGATCATAACACTCTCCACAATGCAATT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73232825 553 - 125196307 GTGGTGGTCTAATCATTAGCAGGATTCTGCAGGAA---ACGACCAGTTTAAGGAGCCAGACAGCTCATGGCCAAGAGGAGAGTCACAGCACGATGATG-ACTCCAACT-C-GGCCAGCTCTGTACTA---TAGGAGTTTGACGTC--GGGGTCTATAGACAGCAGGCCAGGGGAACTCC--AGTGTGCTCCACAGAACAGCACCTGGACACAAACCAAGCC----CCCACTGCAACAAGCCACGCTCAGAAACTGACAGTGAGTGTTTAGAAATGGGACGTTTCTAAC------------GGAGTGCTATGGAAACGGGAC-GTCGTAATTTTATGTCTGTTGAatctaacaagaaaaaaatggagctTACCTTTTCCaagttttagagttttaaaattttcatctctcTAGGAATTGTCAGTGTATTTGGCTAAATACCAGTCTGTGAGGAATTGGAAATGAAAGTacacatatgcg--c---------------------acacacacacaggcatg------cacacctgcacatgcacatacctacacacacacgggcacCAAGTCCAGGTCCCTGGACTAGATCATAACACTCTCCACAATGCAATT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72064530 567 - 125710982 GCGGTGGTCTAATCATTAGCAGGATTCTGCAGGAA---ACGACCAGTTTAAGGAGCCAGACAGCTCATGGCCAAGAGAAGAGTCACAGCACGATGATG-ACTCCAACT-CGGGCCAGCTCTGTATTA---TAGGAGTTTGACGCC--GGGGTCTATAGACAGCGGGCCAGGGGAACTCC--AGTGTGCTCCACAGAACAGCAACTGGACACAAACCAAGCC----CCCACTGCAACAAGCCATGCTCAGAAATTGACAGTGAGTGTTTAGAAATGGGACGTTTCTAACGTAGTTTCTAATGGAGTGCTATGGAAACGGGAT-GTCgtaattttatgtctgttgaatctaacaagaaaaaaatggagcttaccttttccaagttttagagttttaaaattttcatctctctaggaattgtcagtgtatttggctaaataccagtctgtgaggaa-tggaaatgaaaGTacacatacgcgcac---------------------acacacacacaggtacg------cacacctgcacatgcacatacctacatacacacGGGCACCAAGTCCAGGTCCCCAGACTAGATCATAACACTCTCCACAATGCAGTT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75522076 523 - 121768101 GCGGTG------------GCAAGATCCTGCAGGAAATGACGACAGGTGTAAGGAGCCAGATATCTCAAGGCCC--AGTAGAGTCACGGCAAGACGACA-ACTCTAACT-TGGGCCAGCTCCGTACGAGGCCAGGAGTTTGGCAT----GGGTCTATAGACACCA-GCCAGGGCTACTCCCAAGTGTTCCCCACAAAACGGCACCTGGACACAAACCAAGGC----CCCACAgcaacaaggcacgctcagaaattgacagc----ttttaga--------------aac----------------tgctatgga---------gtcataattt--tgtctattgaatctaacaagacaagaacagggcttatctttttcaagtgtcagagtttt-acattttcatctctctaggaattgtcagtgtatttggctaagtcccagcctataaggaattggaaatgaaaGTacatgcatgca--c----------atataccccctgcacacacacaggcatg------cacacctgcacaggcacacatctacacacacacGGGCACCAAGTCCAGGTCCCTGGACTCGATCATAACCCTCTCCAAAATGTGCTT i calJac3.chr12 C 0 C 0 s canFam3.chr4 27689400 485 + 88276631 GTGATGGCCCAAT-GGTAGCCGGCTTCTCCAGAAA---ACAAGGAGTTTAAGGAGCCAG------CGCTTCCCA------------AGCAAGATGACATGTCCCAGCTATGGCCCAGCCCTGCTCTG---CAGGCCTTCAACACCATGGGTCCTGGAGATACTAGCCCAGG---CTCCC--TGTGTGCCCCACGGAACAGGGCCGGGAGACTGAACACGCCCGGACCgcctgccacaaggtatggacagaaat----agggggcgcttaga--------------aac----------------tgctgtggaaatgtgacaagagtaattttatgtctgttgaaactaataaaaagtcaa--aagcttatattttgtaagt-------tttt-aatttttcatttctctag----tattaatatatttggctga-tactggcttacgatggattagagattaaaaCTCACACATACA--G---------------------AGAAGCTC-CAAGCTTGGTTTTTGAGACCAAC---TGTTTTTGCCTG---AGACACAGGAA------------------ACTAGATGCTAACAGTCTCTACCAGTGAATT i canFam3.chr4 C 0 C 0 e mm10.chr14 24135963 299 + 124902244 I a score=650320.000000 s hg38.chr10_KI270825v1_alt 32071 271 + 188315 AGAATCCCTGTCCCATCCTCTGTGACTGCAAATGCTAATG----CCCTGCAAATGACAGACTTTCCCAAAGAGGC----TGAAGGCCAGAAGGTAAAA---------------TAGAACCAAACTTCACTGAGTTTGTTTCACTTTGAAGACCAGAGATGGTAAGGGGACAGCAttgtttttttttgttttgttttttgtttttttttttttGGAGGGG--GGTTTGCCAAATCCCGCTGCAAAACGGGACTGCCCTGGAGGGTGCTAGGGACAGATGGGCCCCTAGCCTCCGCTG s panTro4.chr10 76402678 270 + 133524379 AGAATCCCTGTCCCATCCTCTGTGACTGCAAATGCTAATG----CCCTGCAAATGACAGACTTTCCCAAAGAGGC----TGAAGGCCAGAAGGTAAAA---------------TAGAACCACACTTCACTGAGTTTGTTTCACTTTGAAGACCAGAGATGGTAAGGGGATAGCATTGtttttttt-gttttgttttttgcttttttttttttGGAGGGG--GGTTTGCCAAATCCCGCTGCAAAACGGGACTGCCCTGGAGGGTGCTAGGGACAGATGGGCCCCTAGCCTCCGCTG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76070708 265 - 133410057 AGAATCCCTGTCCTACCCTCTGTGACTGCAAATGCTAATA----CCCTGCAAATGACAGACTTTCCCAAAGAGGC----TGAAGGCCAGAAGGTAAAC---------------TAGAACCACACTTCACTGAGTTTGTTTCACTTTGAAGACCAGAGATGGTAAGGGGACAGCATTttttgtttt-gttttgttt-----tgttttgttttTGGAGGGG--GGTTTGCCAAATCCCACTGCAAAATGGGACTGCCCTGGAGAGTGCTAGGGACAGATGGGCCCCTAGCCTCCGCTG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35013772 264 + 104879549 AGAATCCCTGTCCCATCCTCTGTGACTGCAAATGCTAATG----CCTTGCAAATGACAGACTTTCCCAAAGAGGC----TGAAGACTGGAAGGTAAAA---------------TAGAACCACACTTCACTGAGTTTGTTTCACTTTGAAGACCAGAGATGGTAAGGGGACAGCAttgtttttttg---tttgtt------tgtttgttttttgGGGGGGGTGGTTTGCCAAATCCCACTGCAAAACGGGACTGCCCTGGAGGGTGCCAGGGACAGGTGGGCCCCTAGCCTCCACTG i nomLeu3.chr18 I 970 C 0 s rheMac3.chr9 73806665 231 - 130959383 AGAATCCCTGTCCCATCCTCTGTGACTGCAAATGCTAATA----CCCTGCAAATGACAGACTTTCCTCAAGAGGCTGAATGAAGGCCGGAAGGTGAAA---------------TAGAACCACACTTCATTGAGTTTGTTTCACTTTGAAGACCAGAGATGGTAAGGGGGCAGCAA-----------------------------TTTTTTTT---------TTTTTGCCAAATCCCACTGCAAAACTGGCCTGCCCTGGAGGGTGCTAGGGACAGATGGGCCCCTAGC-------- i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75368675 235 - 133195287 AGAATCCCTGTCCCATCCTCTGTGACTGCAAATGCTAATA----CCCTGCAAATGACAGACTTTCCTCAAGAGGCTGAATGAAGGCCGGAAGGTGAAA---------------TAGAACCACACTTCATTGAGTTTGTTTCACTTTGAAGACCAGAGATGGTAAGGGGGCAGCAA-------------------------tttttttttttt---------tttttGCCAAATCCCACTGCAAAACTGGCCTGCCCTGGAGGGTGCTAGGGACAGATGGGCCCCTAGC-------- i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73233378 241 - 125196307 AGAATCCCTGTCCCATCCTCTGTGACTGCAAATGCTAATA----CCCTGCAAATGACAGACTTTCCTCAAGAGGCTGAATGAAGGCCGGAAGGTGAAA---------------TAGAACCACACTTTATTGAGTTTGTTTCACTTTGAAGACCAGAGATGGTAAGGgggcagcaa-------ttt---ttt---------tttttttttttt---------tttttgccaaatccCACTGCAAAACTGGCCTGCCCTGGAGGGTGCTAGGGACAGATGGGCCCCTAGC-------- i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72065097 253 - 125710982 AGAATCCCTGTCCCATCCTCTGTGAATGCAAATGCTAATG----CCCTGCAACTGACAGACTTTCCTCAAGAGGCTGAATGAAGGCCGGAAGGTGAAA---------------TAGAACCACACTTCATTGAGTTTGTTTCACTTTGAAGACCAGAGATGGTAAGGGGGCAGCATTGTGGttttt---tttgtttg----tttttttttttt---------tttttGCCAAATCCCACTGCAAAACTGGCCTGCCCTGGAGGGTGCTAGGGACAGATGGGCCTCTAGC-------- i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75522599 244 - 121768101 AGAATCCCTGTCCCATCCTCTGTGACTGC-AATGTTAATG----CCCTGCAAATGAAAGACTTTCCCAAAGAGGC----TGAAGGCTGGAAGGTAAAA---------------TGGAACCACACTTCACTGAGTTTGTTTCCATTTGAAGACCAGAGACAGTAAGGGGGCAGCGT--TTTTTTCC---------------TTTTTTGGTTGT---------TGTTTGCGAAAGCCCACTGCAAAAGTCATCCGCCCTGGAGGATGCTAGGGACAGATGG--CCATAGCCTCCGCAG i calJac3.chr12 C 0 C 0 s canFam3.chr4 27689885 218 + 88276631 AAAATCACTGTCCCTGCCTCTCTGACCCC-AGTGTTGTTAACCCCCCTACAAATAACTGATTTATC---AGAGGT----TGAAAGCCACAAAGTACAATGGCAGCCAACAGATTGGAGCCATGCTTCTTTTGGTTTGCTGTCTTTCAAAGACCTAAGCTGTTAGGAGTGGAGC-----------------------------------TTTT---------TCTTCACCAAACTCTATGGCTATACCAGAGGGCCCTGAGAGCT----------------CTCCTG---------- i canFam3.chr4 C 0 C 0 e mm10.chr14 24135963 299 + 124902244 I a score=652248.000000 s hg38.chr10_KI270825v1_alt 32342 217 + 188315 CCCACACTGCTGGCACACTGGGGGCTGCTCCAGTCCCCGCCCTGCCTGGGGACACTGTGGCTGCACTAAACTGCACCTGTGCTATGAGACAGACCCACCACTGCACGTGTGAAAATGAGCAGGCAA----GCCAGG-CAGGACCTGAGGCCAAGATCGGTGAGCTTAACAT-TCAACCTGTAAGAATCCTGACG--------TTGGCCAGGGACTGCAATCTGAACACCTG s panTro4.chr10 76402948 217 + 133524379 CCCACACTGCTGGCACACTGGGGGCTGCTCCAGTCCCCGCCCTGCCTGGGGACACTGTGGCTGCACTAAACTGCACCTGTGCTATGGGACAGACCCACCACTGCACGTGTGAAAATGAGCAGGCAA----GCCAGG-CAGGACCTGAGGCCAAGATCGGTGAGCTTAACAT-TCAACCTGTAAGAATCCTGACG--------TTGGCCAGGGACTGCGATCTGAACACCTG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76070973 217 - 133410057 CCCACACTGCTGGCACACTGGGGGCTGCTCCAGTCCCCGCCCTGCCTGGGGACACTGTGGCTGCACTAAACGGCACCGGTGCTATGAGACAGACCCATCACTGCATATGTGAAAATGAGCAGGCAA----GCCAGG-CAGGACCTGAGGCCAAGATCGGTGAGCTTAACAT-TCAACCTGTAAGAATCCTGACG--------TTGGCCAGGGACTGCAATCTGAACACCTG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35014036 215 + 104879549 CCCACACTGCTGGTACACTGGGGGCTGCTCCAGTCCCTGCCCTGCCTGGGGACAC--TGGCTGCACTAAACAGCACCTGTGCTATGAGACAGACCCACCACCGCACATGTGAAAATGAGCAGGCAA----GCCAGG-CAGGACCTGAGGCCAAGATCGGTGAGCTTAACAT-TCAACCTGTAAGAATCCTGACA--------TTGGCCAGGGACTGCAATCTGAACACCTG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73806896 213 - 130959383 ----CACTGCTGGCACACTGGGGGCTGCTGCAGTCCCTGCCATGCCTGAGGACACTGTGGCTGCACTAAATGGCACCTGTGCTGCGAGACAGACCCACCACTGCACATGTGGAAACGAGTGGGCAA----GCCAGG-CAGGACCTGAGGCCAAGATCAGTGAGCTTAACAT-TCAACCCGTGAGAATCCTGACA--------CTGGCCAGGGGCTGCAATCTGAACACCTG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75368910 213 - 133195287 ----CACTGCTGGCACACTGGGGGCTGCTGCAGTCCCTGCCACGCCTGAGGACACTGTGGCTGCACTAAACGGCACCTGTGCTGCGAGACAGACCCACCACTGCACATGTGGAAACGAGTGGGCAA----GCCAGG-CAGGACCTGAGGCCAAGATCAGTGAGCTTAACAT-TCAACCCGTGAGAATCCTGACA--------CTGGCCAGGGGCTGCAATCTGAACACCTG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73233619 213 - 125196307 ----CACTGCTGGCACACTGGGGGCTGCTGCAGTCCCTGCCATGCCTGAGGACACTGTGGCTGCACTAAACGGCACCTGTGCTGCGAGACAGACCCACCACTGCACATGTGGAAACGAGTGGGCAA----GCCAGG-CAGGACCTGAGGCCAAGATCAGTGAGCTTAACAT-TCAACCCGTGAGAATCCTGACA--------CTGGCCAGGGGCTGCAATCTGAACACCTG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72065350 213 - 125710982 ----CACTGCTGGCACACTGGGGGCTGCTGCAGTCCCCGCCATGCCTGAGGACACTGTGGCTGCACTAAACGGCACCTGTGCTTCGAGACAGACCCACCACTGCACATGTGGAAACGAGTGGGCAA----GCCAGG-CAGGACCTGAGGCCAAGATCAGTGAGCTAAACAT-TCAACCCGTGAGAATCCTGACA--------CTGGCCAGGGGCTGCAATCTGAACACCTG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75522843 217 - 121768101 TCCACACTGCTGGCACACTGGAGGCTGCTCCAGTCCCCGCCCTGCCCAGGGATGCTGTGGCTGCACAACATGGCACCTACGCTGTGAGGCAGACCCACCGCTGCACATGTGAAAATGACCAGGCAA----GCCAGG-CAGGACCTGAGGCCACGATTAGCAAACTTAACAT-TCAACCTGGGAGAATCCCGCCG--------CTGGCCAGGGACTGCAGTGGGAACACCTC i calJac3.chr12 C 0 C 0 s mm10.chr14 24136262 181 + 124902244 CCTACACTGCTGGTCCA-TCTGGGCTCTTGCGTTCCCAGCC-TGTCTGGGGTCACGGTGGTTATGTTGCGGGGTGTTTGTGCT--GAGTTGGCTCC--TATTGCATGTT---------GTGGTCAG----ACCATG-C----CCAAAGGCTGC-----------------T-GCCACCTAGAATAGCTCTGACC--------CTGGCCTGGGCCTTTGGGCCGAATGTCTA i mm10.chr14 I 299 I 71 s canFam3.chr4 27690103 149 + 88276631 --------------------------------------------------------------------CACAGCACTGGTGCCGGGAGACAGA--------------TGGGGAGAAATCTGGGGGACGGGGCCAGATCATAACATGAGGCTGAAAGCAGGGAACTTTACTTGTCAACCTATAACACTCCTGATGTATTTTATTTGCCCTGCACCTGCCAGCAGAACAGCTG i canFam3.chr4 C 0 C 0 a score=184967.000000 s hg38.chr10_KI270825v1_alt 32559 68 + 188315 ACTTGTCAGGAACGTGCTCATGACAGCACTTGGGAGCATGTAGAAAGTGCGGGCT-------TCTCCACGGCTAA s panTro4.chr10 76403165 68 + 133524379 ACTTGTCAGGAACGTGCTCATGACAGCACTTGGGAGCATGTAGAAAGCACGGGCT-------TCTCCACGGCTAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76071190 68 - 133410057 ACTTGTCAGGAACGTACTCATGACAGCACTTGGGAGCATGTAGAAAGCGCGGGCT-------TCTCCACAGCTAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35014251 68 + 104879549 ACTTGTCAGTAAGGTGCTCATGACAGCACTTGGGAGCATGTAGAAAGCGCGGGCT-------TCTCCATAGCTAA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73807109 68 - 130959383 ACTTGTCAGCAACGTGCTCATGACGGCACTTGGGAGCATGTAGGCAGCACGGGCT-------TCTCCACAGCTAT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75369123 68 - 133195287 ACTTGTCAGCAACGTGCTCATGACGGCACTTGGGAGCATGTAGGCAGCACGGGCT-------TCTCCACAGCTAT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73233832 68 - 125196307 ACTTGTCAGCAACGTGCTCATGACAGCACTTGGGAGCATGTAGGCAGCACAGGCT-------TCTCCACAGCTAT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72065563 68 - 125710982 ACTTGTCAGCAACGTGCTCATGACGGCACTTGGGAGCATGTAGGCAGCATGGGCT-------TCTCCACAGCTAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75523060 68 - 121768101 ACTTAAAATAAATATGCTCATGATGGCACTCGGAAGCACCTAGGAAGTGTAGATT-------TCTCCACAGGTAA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27690252 62 + 88276631 -----TGATGCAAGTGGCGGCAGCAGCACTGGCCGGCATCCGGGAAGTGTGGGCTAGTACCGTCTCC-------- i canFam3.chr4 C 0 C 0 e mm10.chr14 24136443 71 + 124902244 I a score=7806357.000000 s hg38.chr10_KI270825v1_alt 32627 2341 + 188315 GAAAACAGCCTTAGGAAGCCTCTGCTTCCTTCCCTGCTGCCTGCTCCCCACTCCAGGCCC-ACGCACACCTACCTGTGAAGTACCTGCTGTACTCCTGCTCAAGCTTCTGCGCCGCCTCAAACTGCTCTTTGGAATGCCTCTGAGTCACCTTGTCCCTCAGGTAGATGGGGTCTCTCTGCTCCCTGTGGGGACAGC----CA-GA-CACCAGGCTGAGCACTGAGCCTCCTCCAGG--CCCTCTTTCCTTCCTCTGTCCAGGCTAACAGGGGCC-CCATCAAGGCAGGGGTAGGCT--GTGGAG--GGAGGCCCCATGTGCTCCCCACATAAAGCACAGCAACAGCCTGTAGGCTGTCGGGGGAGCTCTGGGC--A-GATGGGGG--------------------AAGGAGGGCCCCCCAGCACACACACTTGGAACAGATGCACCAGCAGCCCCT-AGCGCAGGTCCCAGAAGCTCAGCAGCACAGAAAGGCAAAATGGAGCAGGGCCTTGGTGAGCCCTTGGCCCAACCAGCACAGGAGCCGAAGCTCAGCGAAGGCAAC-GGCTCCTGA-GTCATGAGCCAGCTCGGGGCTGAGTGGGACTGTGCCCAGGCCAC-------TGG---CTCCCCTG-------CTCCTAAGCAGCACGTAGCGAGGAAAGGGGGCTGGGGCAGGAGAGGGGAGCTGTGCAGACCAAGCTGGCCATGCCCAAAAAA-CAGT-GGCAGCACCCAAATGGCGGAGGGGCGCGAGGAA-GGGGCTGCGCTTGGCTGACACCACCTC----TGAGTAGGGGACAGGGCCGACAGGGAAGGGTCATTTTCTACACGTACTGCCTATTTCAAGACCCATAGGCCCATCTCTCATTCCTCAACCCCCCAC-CCCAACACACCCTGCTCC-CTACTTGGGCTCCCAGCCCCACCTGTGACAAGGCCCCAGCGGAGCCCAGGGGGCCAGTTACCTACTTGATGTGCTTGGCGCTCTTGTAGTGGATGAAGATGACAATGGGGTAGATGTGCATGTGGTGGAGCCGCTCAATAGCGTGCGGAGCAATGTCCAGGAGGCAGTGTCGGTTCT---GGGGTG-GGGGGTGCAGAGT--------GAGCCCTGGCGGGCAGTGAG---------GGG---------CAGCCAGCCCCCTGTCCTGCCACCAGCAGGACCCACCT----------------C-ACCT-------CACAG-----------------GGCTCTACC------CACAAACAAGG---CAGTAAAGCCACACAGTACACCGTGGGGAAACCATACCCACGAAACTCCCAACAAACCCCACTT--------------------GCTG-------TGAGGAAGGCCAAGGCTGGGAGCCAGGGCTTAGGGGGCTAG---GGGTGCTGGCCAGCCCAACTCCAAACTTCCTTTCCCGCCTTTGCCCAGATACAGGGACCTTCTGAAAGCCCTGCCCCACCCTGGCCTCTGAAGCCTTATTTTTGCCAGACTGAGC--GAATGAAGAGC-----CAGAGTCTGGTGA-----GCCT----------------------TTGTGTGGCTGAGACTGAAATATGTCTGTCATGTCTGTCGTCCCAG--G---CATCCAGGTGGAGTGCAG-------------GC---------------------CCGT-GC----ACTCCCGACCCCCAGATGCTCCA-------------------------------------CTGGGGCATTC-CCCCAAGTAGAGTTTGCCCACTTT--------------------CAG-----CAGTGAGAAGCCAACACCTTCATCTAACAGAGAAGGGAAGCAAAGCCCAGC-GA-GCGAGCTG-----AGCAGCCTGGAGAAATGGAGCCCAAGGAGCGGCTGTGTCCTTGGACTCCGAGTGTTTGCCCCACCAGCACTCCCCACAGACGTCCCCGC----CCTCGTGCTG--------------CCTAGGATGTTCGAAGGCACCGAGAGTCA------------TAGCCCTTTTAGGGGCAGGGACCCTGA-----GGGAAGGCACGT-TCCTGTCCCCAG---AAGGTGCATGTGAAATT----------GTTCGGCACATGCA-TTTGGGGACCCCGTTCCGGAATGCCCTGCGAGAGGCCTTTCCGCAGAGCTCAATACTCTCATCAGAGATGAGACCCCCC-GCACCTGCCAGAGAGGAAGATGGGGCGGCACATAC--ACAGGGGAA---------------------------------CTCCTCCATCCCCACCAAGG-GATGTGCTTGCAG-------AAACACACAGCAGCCATGAGGGCAAGCCCAGGCACAGGTGAACTCAGACTAACACAACACGGTGGGCTCACTGAAGGTCT--GAGCCGCTGGGGCAGAGGATCACGGACCAGGGGCCTAGA-CCTGTGCACAGGAGGTCTAATACTGGA------------TG-------CCTAATCCTCAGACTGAAGCCCTGGGTACCTTTTCTGTGATCTCCTTTATTGACGCCACAGTGGTCACATCGAAATGGCCGCTTCTCCGCTTATAGTCGACAAACAGGCAATCTTTGACACCCCGCTCAATGGCCTGCTGGGAGGCCTTCATCACCTCTGCAATGCACAGACACAGG-AATCAGGGAGCCCCAGGCCCTGCTGAGCCCCA-GCAGAGGGAGCAGGGGAAGAACACTGCTCAGCAGCT s panTro4.chr10 76403233 2326 + 133524379 GAAAACAGCCTTGG------TCTGCTTCCTTCCCTGCTGCCTGCTCCCCACTCCAGGCCC-ACGCACACCTACCTGTGAAGTACCTGCTGTACTCCTGCTCAAGCTTCTGCGCCGCCTCAAACTGCTCTTTGGAATGCCTCTGAGTCACCTTGTCCCTCAGGTAGATGGGGTCTCTCTGCTCCCTGTGGGGACAGC----CA-GA-CACCAGGCTGAGCACTGAGCCTCCTCCAGG--CCCTCTTTCCTTCCTCTGTCCAGGCTAACAGGGGCC-CCATCAAGGCAGGGGTAGGCT--GTGGAG--GGAGGCCCCATGTGCTCCCCACATAAAGCACAGCAACAGCCTGTAGGCTGTTGGGGTAGCTCTGGGC--A-GATGGGGG--------------------AAGGAGGGCCCCCCAGCACACACACTTGGAACAGATGCACCAGCAGCCCCT-AGCGCAGGTCCCAGAAGCTCAGCAGCACAGAAAGGCAAAATGGAGCAGGGCCTTGGTGAGCCCTTGGCCCAACCAGCACAGGAGCTG------------GCCAACCAGCTCCTGA-GTCATGAGCCAGCTCGGGGCTGAGTAGGACTATGCCCAGGCCAC-------TGG---CTCCCCTG-------CTCCTAAGCAACACGTAGAGAGGAAAGGGGGCTGGGGCAGGAGAGGGGAGCTGTGCAGACCAAGCTGGCCATGCCCAAAAAAACAGC-AGCAGCACCCAAATGGCGGAGGGGCGCGAGGAA-GGGGCTGTGCTTGGCTGACACCACCTC----TGAGTAGGGGACAGGGCCGAGAGGGAAGGGTCATTTTCTACACGTACTGCCTATTTCAAGACCCACAGGCCCATCTCTCATTCCTCAACCCCCCAC-CCCAACACACCCTGCTCC-CTACTTGGGCTCCCAGCCCCACCTGTGACAAGGCCCCAGCGGAGCCCAGGGGGCCAGTTACCTACTTGATGTGCTTGGCGCTCTTGTAGTGGATGAAGATGACAATGGGGTAGATGTGCATGTGGTGGAGCCGCTCAATAGCGTGCGGAGCAATGTCCAGGAGGCAGTGTCGGTTCT---AGGGGGAGGGGGTGCAGAGT--------GAGCCCTGGCGGGCAGTGAG---------GGG---------CAGCCAGCCCCCTGTCCTGCCACCAGCAGGACCCACCT----------------C-ACCT-------CACAG-----------------GGTTCTACC------TACAAACAAGG---CAGTAAAGCCACACAGTGCACCGTGGGGAAACCATACCCACGAAACTCCCAACAAACCCCACTT--------------------GCTG-------TGAGGAAGGCCAAGGCTGGGAGCCAGGGCTTAGGGGGCTAG---GGGTGCTGGCCAGCCCAACTCCAAACTTCCTTTCCCGTCTTTGCCCAGATACAGGGACCTTCTGAAAGCCCTGCCCCACCCTGGCCTCTGAAGCCTTATTTTTGCCAGACTGAGC--GAATGAAGAGC-----CAGAGTCTGGTGA-----GCCT----------------------TTGTGTGGCTGAGACTGAAATATGTCTGTCATGTCTGTCGTCCCAG--G---CATCCAGGTGGAGTGCAG-------------GC---------------------CCGT-GC----ACTCCCGACCCCCAGATGCTCCA-------------------------------------CCGGGGCATTC-CCCCAAGTAGAGTTTGCCCACTTT--------------------CAG-----CAGTGAGAAGCCAACACCTTCATCTAACAGAGAAGGGAAGCAAAGCCCAGC-GA-GCGAGCTG-----AGCAGCCTGGAGAAATGGAGCCCAAGGAGCGGCTGTGTCCTTGGACTCCGAGTGTTTGCCCCGCCAGCACTCCCCACAGACGTCCCCGC----CCTTGTGCTG--------------CCTAGGATGTTCGAAGGCACCAAGAGTCA------------TAGCCCTTTTAGGGGCAGGGACCCTGA-----GGGAAGGCACGT-TCCTGTCCCCAG---AAGGTGCATGTGAAATT----------GTTCGGCACATGCA-TTTGGGGACCCCGTTCCGGAATGCCCTGCGAGAGGCCTTTCCGCAGAGCTCAATACTCTCATCAGAGATGAGACTCCCT-GCACCCACCAGAGAGGGAGACGGGGCGGCACATAC--ACAGGGGAA---------------------------------CTCCTCCATCCCCACCAAGG-GATGTACTTGCAG-------AAACACACAGCAGCCATGAGGGCAAGCCCAGGCACAGGTGAACTCAGACTAATACAACACGGTGGGCTCACTGAAGGTCT--GAGCCGCTGGGGCAGAGGATCACGGACCAGGGGCCTAGA-CCTGTGCACAGGAGGTCTAATACTGGA------------TG-------CCTAATCCTCAGACTGAAGCCCTGGGTACCTTTTCTGTGATCTCCTTTATTGACGCCACAGTGGTCACATCGAAATGGCCGCTTCTCCGCTTATAGTCGACAAACAGGCAATCTTTGACACCCCGCTCAATGGCCTGCTGGGAGGCCTTCATCACCTCTGCAATGCACAGACACAGG-AATCAGGGAGCCCCAGGCCCTGCTGAGCCCCA-GCAGAGGGAGCAGGGGAAGAACACTGCTCAGCAGCT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76071258 2342 - 133410057 GAAAACAGCCTTGGGAACCCTCTGCTTCCTTCCCTGCTGCCTGCTCCCCACTCCAGGCCC-ACGCACACCTACCTGTGAAGTACCTGCTATACTCCTGCTCAACCTTCTGTGCCGCCTCAAACTGCTCTTTGGAATGCCTCTGAGTCACCTTGTCCCTCAGGTAGATGGGGTCTCTCTGCTCCCTGTGGGGACAGC----CG-GA-CACCAGGCTGAGCATTGAGCCTCCTCCAGG--CCCTCTTTCCTTCCTCTGTCCAGGCTAACAGGGGCC-CCATCGAGGCAGGAGTAGGCT--GTGGGG--GGAGGCCCCATGTGCTCCTCACATGAAGCA---CAACAGCCTGCAGGCTGTTGGGGGAGCTCTGGGC--A-GATGGGGG--------------------AAGGAGGGCCCCCCAGCACACGCACTTGGAACAGATGCACCGGCAGCCCCC-AGCGCAGGTCCCAGAAGCTCAGCAGCACAGAAAGGCAAAATGGAGCAGGGTCTTGGCGAGCCCTTGGCCCAAACAGCACAGGAGCCAAAGCTCAGCGAAGGCAAC-GGCTCCTCA-GTCATGAGCCAGCTCGGGGCTGTGTGGCACTGTGCCCAGGCCAC-------TGGCTCCTCCCCTG-------CTCCTAAGCAGCACGTAGAGAGGAAAGCGGGCTGGGGCAGGAGAGGGGAGCTGTGCAGACCAAGCTGGCCATGCCCAAAAAA-CAGC-GGCAGCACCCAAATGGCAGAGGGGCGCGGGGAA-GGGGCTGCACTTGGCTGACACCACCTC----TGAGTGGGGGACAGGGCTGAGAGGGAAGGGTCATTTTCTACACGTACTGCCTATTTCAAGACCCATAGGCCCATCTCTCATTCCTCAACCCCCCAC-CCCAACACACCCTGCTCC-CTACTTGGGCTCCCAGCCCCACCTGTGACAAGGCCCCAGCGGAGCCCAGGGGGCCAGTTACCTACTTGATGTGCTTGGCGCTCTTGTAGTGGATGAAGATGACAATGGGGTAGATGTGCATGTGGTGGAGCCGCTCAATAGCGTGTGGAGCAATGTCCAGGAGGCAGTGTCGGTTCT---GGGGGTAGGGGGTGCAGAGT--------GAGCCCTGGCGGGCAATGAG---------GGG---------CAGCCAGCCGCCTGTCCTGCCACCAGCAGGACCCACCT----------------C-ACCT-------CACAG-----------------GGCTCTATC------CACAAACAAGG---CAGTAAAGCCACACAGTGCACCATGGGGAAACCATACCCACGAAACCCCCAACAAACCCCACTC--------------------GCTG-------TGAGGAAGGCCAAGGCGGGGAGCCAGGGCTTAGGGGGCTGG---GGGTGCTGGCCAGCCCAACTCCAAACTTCCTTTCCCGCCTTTGCCCAGATACAGGGACCTTCTGAAAGCCCTGCCCCACCCTGGCCTCTGAAGCCTTATTTTTGCCAGACTGAGC--GAATGAAGAGC-----CAGAGTCTGGTGA-----GCCT----------------------TTGTGTGGCTGGGACTGAAGTATGTCTGTCATGTCTGTAGTCCCAG--G---CCTCCAGGTGGAGTGCAG-------------GC---------------------CCGT-GC----ACTCCCGACCCCCAGATGCTCCA-------------------------------------CCAGGGCGTTCTCCCCCACTAGAG-TTGCCCACTTT--------------------CAG-----CAATGAGAAGCCAACACCTTCATCTAACAGAGAAGGAAAGCAAAGCCCAGC-GA-GCGAGCTG-----AGCAGCCTGGAGAAATGGAGCCCAAGGAGAGGCTGTGTCCTGGGACTCTGAGTGTTTGCCCCGCCAGCACTCCCCACAGACATCCCCGC----CCTCGTGCTG--------------CCTAGGATGTTCTAAGGCACCAAGAGACA------------TAGCCCTTTTAGGGGCAGGGACCCTGA-----GGGAAGGCACGT-TCCTGTCCCCAG---AAGGTGCATGTGAAATT----------CTTCGGCACATGCA-TTTGGGGACCCTGTTCTGGAATGCCCTGTGAGAGGCCTTTCTGCAGAGCTCAATACTCTCATCAGAGATGAAACTCCCC-CCACCCGCCAGAGAGGGAGACGGGGCGGCACATAC--ACAGGGGAA---------------------------------CTCCTCCACCTCCGCCAAGG-GATGTGCTTACAG-------AAACACACAGCAGCCATGAGGGCAATCCCAGGCACAGGTGAACTCAGACTAACACAACACGGTGGGCTCACTGAAGGTCT--GAACCGCTGGGGCAGAGGATCATGGACCAGGGGCCTAGA-CCTGTGCACAGGGGGTCTAATACTGGG------------TG-------CCTAATCCTCAGACTGAAGCCCTGGGTACCTTTTCTGTGATCTCCTTTATTGACGCCACAGTGGTCACATCGAAATGGCCGCTTCTCCGCTTATAGTCGACAAACAGGCAATCTTTGACACCCCGCTCAATGGCCTGCTGGGAGGCCTTCATCACCTCTGCAAAGCACAGACGCAGG-AATCAGGGAACCCCAGGCCCTGCTGAGGCCCA-GCAGAGGGAGCAGGGGAAGAACACTGCTCAGCAGCT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35014319 2345 + 104879549 GAAAACTGCCTTGGGAAGCCTCTGCTTCCTTCCCTGCTGCCTGCTCCCTGCTCCAGGCCC-ATGCACACCTACCTGTGAAGTACCTGCTATACTCCTGCTCAACCTTCTGCGCCGCCTCAAACTGCTCTTTGGAATGCCTCTGAGTCACCTTGTCCCTCAGGTAGATGGGGTCTCTCTGCTCCCTGTGGGGACAGC----CA-GA-CACCAGGCTGAGCACTGAGCCTACTTCAGG--CCCTCTTTCCTTCCTCTGTCCAGGCTAACAGGGGCC-CCATCGAGGCAGGGGTAGGCT--GTGCGG--GGAGGCCCCATGTGCTCCCCACATAAAGCACAGCAATAGCCTGCAGGCTGTTGGGGGAGCTCTGGGC--A-GATGGGGG--------------------AAGGAGGGCCCCTCAGCACACGCACTT-GAACAGATGCACCAGCAGCCCCC-AGTGCAGGTCCCAGAAGCTCAGCAGCACAGAAAGGCAAAATGGAGCAGGGCCTTGGCGAGCCCTTGGCCCAACCAGCACAGGAGCCGAAGCTCAGTGAAGGCAAC-GGCTCCTGA-GTCATGAGCCAGCTCGGGGCTGAGTGGGACCGTGCCCAGGCCAC-------CGG---CTCCCCTG-------CTCCTAAGCAGCACGTAGAGAGGAAAGGGGGCTGGGGCAGGAGACGGGAGCTGTGCAGACCAAGCTGGCCATGCCCAAAAAA-CAGT-GGCAGCACCCAAATGGCGGAGGGGCATGGGGAA-GGGGCTGTGCTTGGCTGACACCACCTC----TGAGTAGGGGACAGGGCCAAGAGGTAAGGGTCATTTTCTACACGCACTGCCTATTTCAAGACCCATAGGCCCATCTCTCATTCCTCAACCCCCCAC-CCCAACACACCCTGCTCC-CTACTTGGGCTCCCAGCCCCACCTGTGACAAGGCCCCAGCGGAGCCCAGGGGGCCAGTCACCTACTTGATGTGCTTGGCGCTCTTGTAGTGGATGAAGATGACAATGGGGTAGATGTGCATGTGGTGGAGCCGCTCAATAGCGTGCGGAGCAATGTCCAGGAGGCAGTGTCGGTTCT---GGGGGTAGTGGGTGCAGAGT--------GAGCCCTGGCGGGCAGTGAG---------GGG---------CAGCCAGCCCCCTATCCTGCCACCAGCAGGACCCACCT----------------C-ACCT-------CACAG-----------------GGCTCTACC------CACAAACAAGG---CAATAAAGCCACATGGTGCACCATGGGGAAACCATACCCACGAAACTCCCAACAAACCTCACTC--------------------ACTG-------TGAGGAAGGCCAAGGCTGGGAGCCAGGGCTTAGGGGGCTGG---GGGGGTTGGCCAGCCCAATTCCAAACTTCCTTTCCCGCCTTTGACCAGATACAGGGACCTTCTGAAAGCCCTGCCCCGCCCTAGCCTCTGAAGCCTTATTTTTGCCAGACTGAGC--GAATGAAGAGC-----CAGAGTCTGGTGA-----GCCT----------------------TTGTGTGGCTGGGACTGAAGTACGTCTGTCGTGTCTGTCGTCCCAG--GCCTCCTCCAGGTGGAGTGCAG-------------GC---------------------CCGT-GT----ACTCCCAACCCCTAGATGCTCCA-------------------------------------CCGGGGCGTTC-CCCCCA-TACAGTTTGCCCACTTT--------------------CAG-----CAATGAGAAGCCAACGCCGTCATCTAACAGAGAAGGAAAGCAAAGCCCAGC-GA-GCGAGCTG-----AGCAGCCTGGAGAAATGGAGCCCAAGGAGCGGCTGTGTCCTCGGACTCCAAGTGTTTGCCCCGCCAGCACTCCCCACAGACGTCCCCGC----CCTCGTGCTG--------------CCTAGGATGTTCAAAGGCACCAAGAGACA------------TAGCCCTTTTAGGGGCAGGGACCCGGA-----GAGAAGGCACGT-TCCTGTCCCCAG---AAGGTGCATGTGAAATT----------GTTCGGCACATGCATTTTGGGGACCCCGTTCTGGGATGCCCTGTGAGAGGCCTTTCCGCAGAGCTCAATACTCTCATCAGAGATGAGACTCCCC-CCACCCGCCAGAGAGGGAGACGGGGCGGCACACAC--ACAGGAGAA---------------------------------CTCCTCCACCCCCGCCAAGG-GATGTGCTTGCAG-------AAACACACAGCAGCCATGAGGGCAAGCCCAGGCACAGGTGAACTCAGACTAACACAACACGGTGGGCTCACTGAAGGTCT--AAGCCGCTGGGGCAGAGGATCATGGGCCAGGGGCCTAGA-CCTGTGCACAGGGGGTCTAATACTGGA------------TG-------CCTAATCTTCAGACTGCAGCCCTGGGTACCTTTTCTGTGATCTCCTTTATTGACGCCACAGTGGTCACATCGAAATGACCGCTTCTCCGCTTATAGTCGACAAACAGGCAATCTTTGACACCCCGCTCAATGGCCTGCTGGGAGGCCTTCATCACCTCTGCAAAGCACAGACACAGGAAATCAGGGAGCCCCAGGCCCTGCTGAACCCCA-GCAGAGGGAGCAGGGGAAGAACACTGCTCAGCAGCT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73807177 2361 - 130959383 GAAAACTGTCTTGGGAAGCCTCTGCTTCCTTCCCTGCTGCCTGCTCCCCGCTCCAGGCCC-ATGCACACCTACCTGTGAAGTACCTGCTGTACTCCTGCTCAACCTTCTGCGCCGCCTCAAACTGCTCTTTGGAATGCCTCTGAGTCACCTTGTCCCTCAGGTAGATGGGGTCTCTCTGCTCCCTGTGGGAACAGC----CC-GA-CACCAGGCTGAGCACTGAGCCTCCTCCAGG--CCCTCTTTCCTTCCTCTGTCCAGGCTAACAGGGGCC-CCATCGAGGCAGGGGTAGGCT--GTGGGG--GGAGGCCCCACGTGCTCCCCACATAAAGCGCAGCAACAGTCTGCAGGCTG-TGGGGGAGCTCTGGGC--A-GAGGGCGG--------------------AGGGAGGGCACCCCAGTGCATGCACTTGGAGCAGACGCACCAGCAGCCCC--AGCACAAGTCCCAGAAGCTCAGCAGCACAGAAAGCCAAAATGGAGCATGGTCTTGGTGAGCCACTGGCCCAACCAGCACAGGAGCCGAAGCTCAGCGAAGGCAAC-AGCTCCTGA-GTCATGAGCCAGCTCGGGGCTGAGTGGGACTCTGCCCAGGCCAC-------CGG---CTCCCCTG-------CTCCTAAGCAGCACGTAGAGAGGAAAGGGGGCTGGGGCAGGAG--GGGAGCTGCGCAGACCAAGCTGGCCATGCCCAAGGAA-CAGT-GGCAGCACCCAAATGGCAGACGGGCGTGGGGAA-GGGGCTGCGCTTGGCTGACACCACCTC----TGAGTGGGGGACAGGGCCGAGAGGTAAGGGTCATTTTCTACATGTGCTACCTATTTCAAGACCC-TCGGCCCATCTCTCATTCCTCAACCCCCCAC-CCCAACACACCCTGCTCC-CCACTTGGGCTCCCAGCCATAGCTATGACAAGGCCCTGGCGGAGCCCAGGGAGCCAGTCACTTACTTGACATGCTTGGCGCTCTTGTAGTGGATGAAGATGACAATGGGGTAGATGTGCATGTGGTGCAGCCGCTCGATGGCGTGGGGAGCGATGTCCAGGAGGCAGTGTCGGTTCT---GGGGGTAGGGGGTGCAGAGT--------GAGCCCTGGGGGGCAGGGAG---------GGG---------CAGCCAGCGCCCTCTCCTGCCACCAGCAGGACCCACCT----------------C-ACCT-------CACAG-----------------AGCTCTACC------CACAAACAAGG---CAGTAAAGCCACACGGTGCACCGTGGGGAAACCGTACCCAGGAAACTCCCAACAAACCCCACTC--------------------GCTG-------TGATGAAGGCCAAGGATGGCAGCCAGGGCTGGTGGGGCCCG-GTGGGGGGTGGCCAGCCCAACTCCAAACTTCCTTTCCCGCCTTTGCCCAGATACAGGGACTTTCTGAAAGCCCTGCCCCACCCTGGCCTCTGAAGCATTATTTTTGCCAGACTGAGC--AAATGAAGAGC-----CAGAGTCTGGTGA-----GCCT----------------------TTATGTGGCTGGGACTGAAGTACGTCTGTC---------GTCCCAG--G---CCTCCAGGTGGAGTGCAG-------------GC---------------------CCGT-GC----ACTCCCCACCCCCAGATGCTCCT-------------------------------------CCAGGGCACTC-CCCCCACTAGAGCTCGCCCACTTT--------------------CAG-----CAGTGAGAAGCCAACACCTTCATCTCACAGAGAAGGAAAGCAAAGCCCAGC-GA-GCAAGCTG-----AGCAGCCTGGAGAAATGCAGCCCAAGGAGCGGCCATGTCCTCCGACTCTGAGTGTTTGCTCCGCCAGCACTCCCCACAGATGTCCCCGC----CCTCATGTTG--------------CCTAGGATGTTCGAAGGCACCAAGAGACA------------TAGCCCTTTTAGGGGCAGGGACCCTGA-----GGGAAGGTACGT-TCCTGTCCCCAG---AAGGTGCATGTGAAATT----------GTTCGGCACATGCA-TTTGGGGACCCCGTTCTGGAATGCTCTGCAAGAGGCCTTTCTACAGAGCTCAATACTCTCATCAGAGATGAGACTCCCCACCACCCGCCAGAGAGGGAGAC-GGGCGGCATGCAC--ACAGGGCAACTTCTCCACCCCCGCCAAGGGACGTGCCTGCAGCTCCTCCACCCCCGCCAAGG-GATGTGCTTGCAG-------AAACACACAGCAGCCATGAGGGCAAGCCCAGGCGCAGATGAACTCAGACTAACACAACACGGTGGGCTT----AAGGTCTGAGAGCCGCTGGGGCAGAGGATCACGGACCAGGGGCCCAGA-CCTGTGCACAGGGGGTCTAATACTGGA------------TG-------CCTAACCCTCAGACTGAAGCCCTGGGTACCTTTTCTGTGATCTCCTTTATTGACGCCACAGTGGTCACATCGAAATGGCCGCTTCTCCGCTTATAGTCGACAAACAGGCAATCTTTGACACCCCGCTCAATGGCCTGCTGGGAGGCCTTCATCACCTCTGCAAAGCACAGACACAGG-AATCAGGGAGCCCCAGGCCCTGCTGAGCCCCA-GCAGAGGGAGCAGGGGAAGAATACTGCTCAGCAGCT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75369191 2361 - 133195287 GAAAACTGTCTTGGGAAGCCTCTGCTTCCTTCCCTGCTGCCTGCTCCCCGCTCCAGGCCC-ACACACACCTACCTGTGAAGTACCTGCTGTACTCCTGCTCAACCTTCTGCGCCGCCTCAAACTGCTCTTTGGAATGCCTCTGAGTCACCTTGTCCCTCAGGTAGATGGGGTCTCTCTGCTCCCTGTGGGAACAGC----CC-GA-CACCAGGCTGAGCACTGAGCCTCCTCCAGG--CCCTCTTTCCTTCCTCTGTCCAGGCTAACAGGGGCC-CCATCGAGGCAGGGGTAGGCT--GTGGGG--GGAGGCCCCACGTGCTCCCCACATAAAGTGCAGCAACAGTCTGCAGGCTG-TGGGGGAGCTCTGGGC--A-GAGGGCGG--------------------AGGGAGGGCACCCCAGTGCATGCACTTGGAGCAGACGCACCAGCAGCCCC--AGCACAAGTCCCAGAAGCTCAGCAGCACAGAAAGCCAAAATGGAGCATGGTCTTGGTGAGCCATTGGCCCAACCAGCACAGGAGCCGAAGCTCAGCGAAGGCAAC-AGCTCCTGA-GTCATGAGCCAGCTCGGGGCTGAGTGGGACTCTGCCCAGGCCAC-------CGG---CTCCCCTG-------CTCCTAAGCAGCACGTAGAGAGGAAAGGGGGCTGGGGCAGGAG--GGGAGCTGCGCAGACCAAGCTGGCCATGCCCAAGGAA-CAGT-GGCAGCACCCAAATGGCAGACGGGCGTGGGGAA-GGGGCTGCGCTTGGCTGACACCACCTC----TGAGTGGGGGACAGGGCCGAGAGGTAAGGGTCATTTTCTACATGTGCTACCTATTTCAAGACCC-TCGGCCCATCTCTCATTCCTCAACCCCACAC-CCCAACACACCCTGCTCC-CCACTTGGGCTCCCAGCCATAGCTGTGACAAGGCCCCGGCGGAGCCCAGGGGGCCAGTCACTTACTTGACATGCTTGGCGCTCTTGTAGTGGATGAAGATGACAATGGGGTAGATGTGCATGTGGTGCAGCCGCTCGATGGCGTGGGGAGCGATGTCCAGGAGGCAGTGTCGGTTCT---GGGGGTAGGGGGTGCAGAGT--------GAGCCCTGGGGGGCAGCGAG---------GGG---------CAGCCAGCGCCCTCTCCTGCCACCAGCAGGACCCACCT----------------C-ACCT-------CACAG-----------------AGCTCTACC------CACAAACAAGG---CAGTAAAGCCACACGGTGCACCGTGGGGAAACCGTACCCAGGAAACTCCCAACAAACCCCACTC--------------------GCTG-------TGATGAAGGCCAAGGATGGCAGCCAGGGCTGGTGGGGCCCG-GTGGGGGGTGGCCAGCCCAACTCCAAACTTCCTTTCCCGCCTTTGCCCAGATACAGGGACTTTCTGAAAGCCCTGCCCCACCCTGGCCTCTGAAGCATTATTTTTGCCAGACTGAGC--GAATGAAGAGC-----CAGAGTCTGGTGA-----GCCT----------------------TTATGTGGCTGGGACTGAAGTACGTCTGTC---------GTCCCAG--G---CCTCCAGGTGGAGTGCAG-------------GC---------------------CCGT-GC----ACTCCCCACCCCCAGATGCTCCT-------------------------------------CCAGGGCATTC-CCCCCACTAGAGCTTGCCCACTTT--------------------CAG-----CAGTGAGAAGCCAACACCTTCATCTCACAGAGAAGGAAAGCAAAGCCCAGC-GA-GCAAGCTG-----AGCAGCCTGGAGAAATGCAGCCCAAGGAGCGGCCATGTCCTCCGACTCTGAGTGTGTGCTCCGCCAGCACTCCCCACAGATGTCCCCGC----CCTCATGTTG--------------CCTAGGATGTTCGAAGGCACCAAAAGACA------------TAGCACTTTTAGGGGCAGGGACCCTGA-----GGGAAGGTACGT-TCCTGTCCCCAG---AAGGTGCATGTGAAATT----------GTTCGGCACATGCA-TTTGGGGACCCCGTTCTGGAATGCTCTGCAAGAGGCCTTTCTACAGAGCTCAATACTCTCATCAGAGATGAGACTCCCCACCACCCGCCAGAGAGGGAGAC-GGGCGGCATGCAC--ACAGGGCAACTTCTCCACCCCCGCCAAGGGACGTGCCTGCAGCTCCTCCACCCCCACCAAGG-GATGTGCTTGCAG-------AAACACACAGCAGCCATGAGGGCAAGCCCAGGCGCAGATGAACTCAGACTAACACAACACGGTGGGCTT----AAGGTCTGAGAGCCGCTGGGGCAGAGGATCACGGACCAGGGGCCCAGA-CCTGTGCACAGGGGGTCTAATACTGGA------------TG-------CCTAACCCTCAGACTGAAGCCCTGGGTACCTTTTCTGTGATCTCCTTTATTGACGCCACAGTGGTCACATCGAAATGGCCGCTTCTCCGCTTATAGTCGACAAACAGGCAATCTTTGACACCCCGCTCAATGGCCTGCTGGGAGGCCTTCATCACCTCTGCAAAGCACAGACACAGG-AATCAGGGAGCCCCAGGCCCTGCTGAGCCCCA-GCAGAGGGAGCAGGGGAAGAATACTGCTCAGCAGCT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73233900 2363 - 125196307 GAAAACTGTCTTGGGAAGCCTCTGCTTCCTTCCCTGCTGCCTGCTCCCCGCTCCAGGCCC-ACGCACACCTACCTGTGAAGTACCTGCTGTACTCCTGCTCAACCTTCTGCGCCGCCTCAAACTGCTCTTTGGAATGCCTCTGAGTCACCTTGTCCCTCAGGTAGATGGGGTCTCTCTGCTCCCTGTGGGAACAGC----CC-GA-CACCAGACTGAGCACTGAGCCTCCTCCAgg--ccctctttccttcctctgtccAGGCTAACAGGGGCC-CCATCGAGGCAGGGGTAGGCT--ATGGGG--GGAGGCCCCACGTGCTCCCCACATAAAGCGCAGCAACAGTCTGCAGGCTG-CGGGGGAGCTCTGGGCAGA-GAGGGCGG--------------------AGGGAGGGCACCCCAGTGCATGCACTTGGAGCAGACGCACCAGCAGCCCC--AGCACAAGTCCCAGAAGCTCAGCAGCACAGAAAGCCAAAATGGAGCATGGTCTTGGTGAGCCCTTGGCCCAACCAGCACAGGAGCCGAAGCTCAGCGAAGGCAAC-AGCTCCTGA-GTCATGAGCCAGCTCGGGGCTGAGTGGGACTCTGCCCAGGCCAC-------CGG---CTCCCCTG-------CTCCTAAGCAGCACGTAGAGAGGAaagggggctggggcaggag--gggagcTGCGCAGACCAAGCTGGCCATGCCCAAGGAA-CAGT-GGCAGCACCCAAATGGCGGACGGGCGTGGGGAA-GGCGCTGCGCTTGGCTGACACCACCTC----TGAGTGGCGGACAGGGCCGAGAGGTAAGGGTCATTTTCTACATGTGCTACCTATTTCAAGACCC-TCGGCCCATCTCTCATTCCTCAACGCCCCAC-CCCAACACACCCTGCTCC-CCACTTGGGCTCCCAGCCATAGCTGTGACAAGGCCCTGGCGGAGCCCAGGGGACCAGTCACCTACTTGACGTGCTTGGCGCTCTTGTAGTGGATGAAGATGACAATGGGGTAGATGTGCATGTGGTGCAGCCGCTCGATGGCGTGGGGAGCGATGTCCAGGAGGCAGTGTCGGTTCT---gggggtagggggtgcagagt--------gagccctggggggcagggag---------ggg---------cagccAGCGCCCTCTCCTGCCACCAGCAGGACCCACCT----------------C-ACCT-------CACAG-----------------AGCTCTACC------CACAAACAAGG---CAGTAAAGCCACACGGTGCACCGTGGGGAAACCGTACCCAGGAAACTCCCAACAAACCCCACTC--------------------GCTA-------TGATGAAGGCCAAGGATGGCAGCCAGGGCTGGTGGGGCCCG-GTGGGGAGTGGCCAGCCCAACTCCAAACTTCCTTTCCTGCCTTTGCCCAGATACAGGGACTTTCTGAAAGCCCTGCCCCACCCTGGCCTCTGAAGCATTATTTTTGCCAGATTGAGC--GAATGAAGAGC-----CAGAGTCTGGCGA-----GCCT----------------------TTATGTGGCTGGGACTGAAGTACGTCTGTC---------GTCCCAG--G---CCTCCAGGTGGAGTGCAG-------------GC---------------------CCGT-GC----ACTCCCCACCCCCAGATGCTCCT-------------------------------------CCAGGGCATTC-CCCCTACTAGAGCTCGCCCACTTT--------------------CAG-----CAGTGAGAAGCCAACaccttcatctcacagagaaggAAAGCAAAGCCCAGC-GA-GCAAGCTG-----AGCAGCCTGGAGAAATGCAGCCCAAGGAGCGGCCATGTCCTCCGACTCTGAGTGTTTGCTCCGCCAGCACTCCCCACAGATGTCCCCGC----CCTCATGTTG--------------CCTAGGATGTTCGAAGGCACCAAGAGACA------------TAGCCCTTTTAGGGGCAGGGACCCTGA-----GGGAAGGTACGT-TCCTGTCCCCAG---AAGGTGCATGTGAAATT----------GTTCGGCACATGCA-TTTGGGGACTCCGTTCTGGAATGCCCTGCAAGAGGCCTTTCTACAGAGCTCAATACTCTCATCAGAGATGAGACTCCCCACCACCCGCCAGAGAGGGAGAC-GGGCGGCATGCAC--ACAGGGCAACTCCTCCACCCCCGCCAAGGGATGTGCCTGCAGCTCCTCCACCCTCGCCAAGG-GATGTGCTTGCAG-------AAACACACAGCAGCCATGAGGGCAAGCCCAGGCGCAGATGAACTCAGACTAACACAACACGGTGGGCTT----AAGGTCTGAGAGCCGCTGGGGCAGAGGATCACGGACCAGGGGCCCAGA-CCTGTGCACAGGGGGTCTAATACTGGA------------TG-------CCTAACCCTCAGACTGAAGCCCTGGGTACCTTTTCTGTGATCTCCTTTATTGACGCCACAGTGGTCACATCGAAATGGCCGCTTCTCCGCTTATAGTCGACAAACAGGCAATCTTTGACACCCCGCTCAATGGCCTGCTGGGAGGCCTTCATCACCTCTGCAAAGCACAGACACAGG-AATCAGggagccccaggccctgctgAGCCCCA-GCAGAGGGAGCAGGGGAAGAATACTGCTCAGCAGCT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72065631 2363 - 125710982 GAAAACTGTCTTGGAAAGCCTCTGCTTCCTTCCCTGCTGCCAGCTCCCTGCTCCAGGCCC-ACGCACACCTACCTGTGAAGTACCTGCTGTACTCCTGCTCAACCTTCTGTGCCGCCTCAAACTGCTCTTTGGAATGCCTCTGAGTCACCTTGTCCCTCAGGTAGATGGGGTCTCTCTGCTCCCTGTGGGAACAGC----CC-GA-CACCAGGCTGAGCACTGAGCCTCCTCCAGG--CCCTCTTTCCTTCCTCTGTCCAGGCTAACAGGGGCC-CCATCGAGGCAGGGGTAGGCT--GTCGGG--GGAGGCCCCACGTGCTCCCCACATAAAGCGCAGCAACAGTCTGCAGGCTG-CGGGGGAGCTCTGGGC--A-GAGGGCGG--------------------AAGGAGGGCACCCCAGTGCATGCACTTGGAGCAGACGCACCAGCAGCCCC--AGCACAGGTCCCAGAAGCTCAGCAGCACAGAAAGCCAAAATGGAGCAGAGTCTTGGTGAGCCCTTGGCCCAACCAGCACAGGAGCCGAAGCTCAGCAAAGGCAAC-AGCTCCTGA-GTCATGAGCCAGCTCAGGGCTGAGTGGGACTCTGCCCAGGCCAC-------CGG---CTCCCCTG-------CTCCTAAGCAGCATGTAGAGAGGAAAGGGGGCTGGGGCAGGAG--GGGAGCTGTGCAAACCAAGCTGGCCACGCCCAAGGAA-CAGTGGGCAGCACCCAAATGGCGGACGGGCGTGGGGAA-GGGGCTGCGCTTGGCTGACACCACCTC----TGAGTGGGGGACAGGGCCGAGAGGGAAGGGCCATTTTCTACATGTGCTATCTATTTCAAGACCCATCGGCCCATCTCTCATTCCTCAACCCCCCAC-CCCAACACAGCCTGCTCC-CCACTTGGGCTCCCAGCCATAGCTGTGACAAGGCCCCGGCGGAGCCCAGGGGGCCAGTCACCTACTTGACGTGCTTGGCGCTCTTGTAGTGGATGAAGATGACAATGGGGTAGATGTGCATGTGGTGCAGCCGCTCGATGGCGTGGGGAGCGATGTCCAGGAGGCAGTGTCGGTTCT---GGGGGTAGGGGGTGCAGAGT--------GAGCCCCGGGGGGCAGGGAG---------GGG---------CAGCCAGCGCCCTGTCCTGCCACCAGCAGGACCCACCT----------------C-ACCT-------CACAG-----------------AGCTCTACC------CACAAACAAGG---CAGCAAAGCCACATGGTGCACTGTGGGGAAACCATACCCAGGAAACTCCCAACAAACCCCACTC--------------------GCTG-------TGATGAAGGCCAAGGATGGCAGCCAGGGCTGGTGGGGCCCG-GTGGGGGGTGGCCAGCCCAACTCCAAACTTCCTTTCCCACCTTTGCCCAGATACAGGGACTTTCTGAAAGCCCTGCCCCACACTGGCCTCTGAAGCATTATTTTTGCCAGACTGAGC--GAACGAAGAGC-----CAGAGTCTGGTGA-----GCCT----------------------TTATGTGGCTGGGACTGAAGTACGTCTGTC---------GTCCCAG--G---CCTCCAGGTGGAGTGCAG-------------GC---------------------CCGT-GC----ACTCCCCACCCCCAGATGCTCCA-------------------------------------CCAGGGCATTC-CCCCTACTAGAGCTCGCCCACTTT--------------------CAG-----CAGTGAGAAGCCAACACCTTCATCTCACAGAGAAGGAAAGCAAAGCCCAGC-GA-GCAAGCTG-----AGCAGCCTGGAGAAATGCAGCCCAAGGAGCGGCCATGTCCCCCGACTCTGAGTGTTTGCTCCGCCAGCACTCCCCACAGATGTCCCCGC----CCTCATGTTG--------------CCTAGGATATTCGAAGGCACCAAGAGACA------------TAGCCCTTTTAGGGGCAGGGACCCTGA-----GGGAAGGTATGT-TCCTGTCCCCAG---AAGGTGCATGTGAAATT----------GTTCAGCACATGCA-TTTGGGGACCCCGTTCTGGAATGCCCTGCAAGAGGCCTTTCTGCAGAGCTCAATACTCTCATCAGAGATGAGACTCCCCACCACCCGCCAGAGAGGGAGAC-GGGTGGCACGCAC--ACAGGGCAACTCCTCCACCCCCGCCAAGGGATGTGCCTGCAGCTCCTCCACCCCCGCCAAGG-GATGTGCTTGCAG-------AAACACACAGCAGCCACGAGGGCAAGCCCAGGCGCAGGTGAACTCAGACTAACACAACACGGTGGGCTT----AAGGTCTGAGAGCCGCTGGGGCAGAGGATCACGGACCAGGGGCCCAGA-CCTGTGCACAGGGGGTCTAATACTGGA------------TG-------CCTAACCCTCAGACTGAAGCCCTGGGTACCTTTTCTGTGATCTCCTTTATTGACGCCACAGTGGTCACATCGAAATGGCCGCTTCTCCGCTTATAGTCGACAAACAGGCAATCTTTGACACCCCGCTCAATGGCCTGCTGGGAGGCCTTCATCACCTCTGCAAAGCACAGACATAGG-AATCAGGGAGCCCCAGGCCCTGCTGAGCCCCA-GCAGAGGGAGCAGGGGAAGAATACTGCTCAGCAGCT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75523128 2350 - 121768101 GAAAACTGTCTTGGGAAGCCTCTACTTCCTTCCCTGCGGCCTGCTCCCCACTCCAGGCCC-ACGCACACCTACCTGTGAAGTACCTGCTGTACTCCTGCTCGACCTTCTGCGCCGCCTCAAACTGCTCTTTGGAATGCCTCTGAGTCACCTTGTCCCTCAGGTAGATGGGGTCTCTCTGTTCCCTGTGGGGACAGCCCGACC-GA-CACCAGGCTGAGCACTGAGCCTCCTCCAGG--CCCTCCTTCCTTCCTCTGTCCAGGCTAACAGGGGCC-GCACTGAGGCAGGGGCAGGCT--GTAGGG--GGAGGCCCCATGTGCTCTTCACATAAAGCAGAGCAACAGCCTGTAGGCTGCGGGGGCAGCTCTGGGC--A-GAGGGGGGCAGCTCTGGGCAGAGCGGGTAGGGAGGGCACCCCAGTGCATGCACTTGGAGCAGATGCACCAGCAGTTCCC-AGCATAGGTCCCAGGGGCTCAGCTGCACAGAAAGGCAAAATGGAGCAGGGCCTTGGCGAGCTCTTAGCCCAACCAGCACAGGAGCTAAAGCTCAGCAAAGGCCAA-AGCTCCCGA-GTCATGAGCCAGCTTGAGGCTGAGTGGGACTCTGTCCAGGCCAC-------CAG---CTCCCCTG-------CTCCTAAGCAGCACATAGAGAGGAAAGGGGGCTGGGGCAGGAG--GGGACGTGCGCAGACCAAGCTGGCCATGCACAAGGAA-CGGC-GGCAGCACCCAAATGGCAGA-GGGTGCGGGGAC-AGGGCTGCGCTTGGCTGACATGTCCTCTCCATGAGTGGGGCACAGGACCAAGAGGGAAAGGTCATTTTCTACACGTGCTGCCTATTTCAAGACCCACAGGCCCATCCCTCATTCCTCAACCCCCCCCACCCAACATACCCTGCTCC-CTACTTGGGCTCCCAGCCCCACCTGTGACAAGAACCCAGTGGAGCCCAGGGAGCCAGTCACCTACTTGATGTGCTTGGCGCTCTTGTAGTGGATGAAGATGACAATGGGGTAGATGTGCATGTGGTGTAGCCGCTCAATAGCATGGGGAGCGATGTCCAGGAGGCAGTGTCGGTTCT---GGGGGCAGAGGGCACAGAGT--------GAACC---GGGGGCAGTGAG---------GGG---------CAGCCAGCCCTCTGTCCTGCCACCAGTGGGACCCACCT----------------C-ACCT-------CACAG-----------------GGCTCTGCC------TACAGACTAGG---CAATAAAGCCACCCGGTGCACTGTGGGGAAACCGTACCCGGGAAACTCC----------CACTG--------------------GCTG-------TGATGAAGGCCAAGGCTGGGAGCCAGGGCTGGGCAGGGCTG-ACTGGGCCTGGCCAGCCCAACTCCAATCTTCCTTTCCTGCCTCTGCCCAGATACAGGGCCCTTCTGAAAGCCCTGCCCCACCCTGGCCCCTGAAGCCTGATTTTTGCCAGACTGAGA--GAATGAAGAGC-------GAGTCTGGTGA-----GCCT----------------------TTGTGTGGCTGGGACTGAAGTAAGTCTGTG---------GTCCCAG--G---CCTC-----AGAGTGCAG-------------GC---------------------TTGT-GC----GTTCCCAAACCC--GACGCTCCT-------------------------------------CAGGGCCGTTC-CCCTGACTACAGCTCACCCACTTT--------------------CAG-----CAGTGAGAAGCCAACACCTCCATCTAACAGAGAAGGAGAGCAAAGCCCAGCAAA-GCGAGCTG-----AGAAACCTGGAGAAATAGAGGCCAAAAAGCGCCCGTGTCCCCGGACTCAGAGTGCTTGCCCCGCCAACACCCCCGACGGATGTCCCCAA----CCCTGTGCTG--------------CCTAGGAAGTTCAAAGGCATCAAGAGACA------------TAGCCCTTTTAGGGGCAGGGACCTTGA-----CGGAAGGTGCAC-ACCTGTCCCCAG---AAGGTGCATGTGAAATT----------GTTCGGCATGTGCA-TCTGGGGACCCTGTCCTGGGATGCCCTGAGAGAGGCCTCTCTCCAGAGCTTAATACACTTATCAGAGGTGAGACCTCCCCCCA-----CAGAGAGGAAGAGGGGACGGCACACAC--ACAGGGCAG---------------------------------CTCCTCCACACCTGCCAAGG-GGTGTGCTTGCAG-------AAACACACAGCATCCATGAGGGCAAGCCCAGCTACAGGTGAACTCAGACTAACATGACATGGCGGGTTCACTGAAGGTCTGAGAGCCGCTGGGGCAGAGGATCACGGACCAGGGGCCCAGA-CCTGTGCACAGGAAGTCTCACACTGGATGTTCCAATGGGTG-------CCCAACCCTCGGGCTGAAGCCCTGGGTACCTTTTCTGTGATCTCCTTTATTGACGCCACAGTGGTCACATCGAAGTGGCCACTTCTCCGCTTATAGTCGACAAACAGGCAATCTTTGACACCTCGCTCAATGGCCTGCTGGGAGGCCTTCATCACCTCTGTAAAGCACAGACACAGG-AATCAGGGAGCCCCAGGCCCTGCTGAGCCCCA-GCAGAGGGAGCAGGGGAAGAACAGGGCTCAGCAGCT i calJac3.chr12 C 0 C 0 s mm10.chr14 24136514 1928 + 124902244 GAATGTCACTTGAGGAAAGCCCCAGCTCCTGGCTGGCTG----------------GGCCC-A--CACCCTTACCTGTGAAGTACCTGCTGTACTCCTGATCGATCTTCTGTGCTGTTTCGAATTGCTCTTTGGAATGCCTCTGTGTCACCTTGTCCCTCAGGTAGACAGGGTCTCTCTGTTCCCTGCAGGGGTAGA----CAGGG-AACTAGGATGCGTCTTGAACCTACCCCTGGGTCCCCTCTTCCTTCCTTGGTCCAGGGTGCCAGGCGCCTCCGTGAAGGCCGGCATTGGTTAGGTAGGGCAGGGGATCTAGGGAGCTTTCCCCTAAATG------AACAGCCTCTAGGCTATATAGGGAACTGTGGAC--T-GACTGGCA----------------------------------------------------------------------------------CCAGGAGCTCACCAGCACAGAAATGCCAGGCAGAGAGAGGCCTCACTGAGT-------------------GCAGCCG-------------------AGCT--------------------------------GGACTTAGCTCAGGCTAC------ACAG---TTCCTCTA-----ACCTGCTGCACCACATGCTGAGAGGAAAGAAA---------------GGGGGCTCTG------------------------GAA-GTGT-GGTTGTGCCCAAACAG-----------GAAGGA-GGTGCACAGCCTGGCTAACA--GGTTC----TGGGT-----------CTGAGGGGA------------------GTGCTAT-------------------------------------------CGT-CCCAGCA----------------TTGGG--CCCACCCCCAGCAG---------------GGAGCCTGCGGGCCCAGACACCCACTTGATGTGCTTGGCGCTCTTGTAGCGGATGAAGATGACAATGGGGTAGATGTGCATGTGGTGCAGCCTCTCGATGGCATGCGGGGCGATGTCCAGAAGACAGTGCCGGTTCT---GAAGGACAGTGGCAGAGAGT--------GAATACGCACAGCGGGGAAG---------AGGACTATCCTCCACCCCACCCCAGCCCCTCCCCCAGGAGGGACTCATCT----------------CTACCTTCCTCTACACTC-----------------AAAAATACCAGAGAGCATAAACAAGGTTTCTGGAAGACCACGTAAGCCAGGAAGGGAGAATC-CACTGGGGGAATCTCTCTCTCTCCCCACCC--------------------ATTG-------------------------------ATGGCTGCTGAGATATAAGTAGGAACTAGTCAGC---AAGTCACACCTCA--------------------ATGTGGACTT----GGAGCCCCACCCTACCCTGGCCTCACAAA-------TCTGTTCCACTGAACAAGAATGGGGAACTGTGGTGGAGGAGGGGGACACACAGCT----------------------TTGCAGGGCTACAACAGAAATATACCCAGG------AGCTCCTCAG--A---GCCCAGGAAGGGGGGCAGCCTAAGAAAGACTGC---------------------ATGTAGC----TCTCCCCACT----GAT----------------------------------------------GAGCATGGTTCCTAACTGAAGCCTGTCCAC-AT--------------------CAGAAAACTAATGGGCAGCCCACACTGTC----TGTGGAAGAGGGAACTGCAGACCAGA-GA-AGTAGCTGGTGAAGGAAGGTAAGAGGCCTGAGGGCTGAGGAGGAGCTAGG-------------AGTGTCTACTTTGCTAGCACACCTTGCAGCTAACTCAGT----CCCTAGGGCAT-------ACGGACTCCAGGATG-TCAAAGGCATCAAGAGACA--------CTCTTGGCCTTTGTGGGGTCAGGGACT---------GGGTGGGTGGCT-CTCTGTATCC-----------------------------------------GTGTG-TTCAGGGACCC-ATCTAAGAATGGTCT-TAGAAGGCCTTCC--CAGAGTTTAAAGCTCTCCTCA----------------GCACCCCTCAGAAAGCA-----GAGCTGTATATACCTACAGTGCTG-----------------------------GTGTCACCTAGGTCCTTCTCAGGGAGCTGTGTTAGTGATAAAGGCAGAGACTCAGTATTCAGGAGGATGAGACCAAGAGCAG------------------------------------AAGGTCT--AGACAGTTGAGCTAG-----------CCAGGGCTTTAGAGCCAGGGCAGAGGGTTGCAGCTACCAGA----------GGAG-------CTCAGCCCTTCGGCCAAAGGCCTAGGTACCTTTTCTGTGATCTCCTTTATTGAAGCCACAGTAGTAACATCAAAATGGCCACTCCTCCGCTTGTAGTCCACAAACAGGCAGTCTTTGACACCCCGCTCAATGGCTTGCTGGGAAGCCTTCATCACCTCTGTATGGGA-AGACGCAGA-AGTCAAGGTGCTGGGTAAACAGAAGGGCCCAATGCAGACAGCACA----------ACTGATCATCAGCA i mm10.chr14 I 71 I 54 s canFam3.chr4 27690314 2398 + 88276631 --------CGTTAG------CCTGCGTCCCTCCCCGCTGCCTGCACTTC-CTCCAGGCCAGAGGCGCACCTACCTGTGAAGTACCTACTGTACTCCTGTTCGATCTTCTGAGCTGTCTCAAACTGCTCTTTGGAATGCCTCTGAGTCACCTTGTCCTTCAGGTAGATGGGGTCTCTCTGCTCCCTGTCAG-ACATC----CA-GAGAAGCAGGCTGAGCGTCTCACCTCC-CCAGG--CCCTCC-TCCTTCCTTTGTCCAGAGTAACAGGACCT-CCATCA-----------------ACAGGG-------CCCCAGGCGCTGCTGTCATAAAGCACAGCAATGGCCTGCAGGCCCCATGGGGAGCTCTGGGC--AGGAGAGGGG--------------------AAGGCAGGCACCTCAGC--------------------------TGGCCCCCAGGTACAGGTACCAGAAGCTTGGAAGCACAGAGAGGTAAAGCGGAG-GGGGCCTTGACAAGCTGTCGGCCCAACCAGTACAGAAACTGGAGCTCCGTGACAGTAAA-GGCTCATCACATCCCAAGCCAGCTTCTCGCAGACCTGGACCCAGCT--GGTCACCTAGTTGCTG---CGTCCTTGTGAGCCCCCGCTGAGAGGCAGGAGAAGGAGAAAGGGGGACAAGATGCACA--GGGAGTGACGCGGACAAAGCT-GCACTACTTAGGAAC-GTGC-GGCATCACACAG--GGCAAAGGGTGGTGGGGAGCAGGACTGTGCCTGGTTAGCACCACCTG--AATGAGCGTGCGATGGG-----GAGGG---------TTCCTGCACCTACTGCCCAT----------------------CTCATCCTTCCATGCC-CAC-CCCA-------CTGCCCCGGTGTCTGAGCCAGCAGCCCCATCGCCACCAAAGCCCCCCC---TCCCCCGGAGCCCGTCACCTACTTGATGTGTTTGGCGCTCTTGTAGTGGATGAAGATGACAATGGGGTAGATGTGCATGTGGTGCAGCCGCTCGATGGCATGGGGGGCGATGTCCAGGAGACAGTGCCGGTTCTAAAGGGGATGATGAATGAGGAGTCAGGGCCCGGGCCCTAGAAACACTGGAGTCCTTCTGAGGA---------CACCTCCCGCTGGTCTCTGCCACTGACGGGGCCAACCTATCTCCCACGCTGCTCC-ACCC-------CACCGTATAAACGAGCCCGTGAGGCCCTCCC------CATGAGTGAGG---CAGCAGGACCA----GTCTACTGT--GAAGACCGTGCAGGAGGAAGCCGCGGAGAGCTTTACTCCAGAGAACCTCTCCATGCAAGCTGTCGAGTCTGATGGTGGCCAAGGCCAG-AGCCAGGGCAGA----------GCGGGGTCTGGACGGCCCATCCCCAGCCAGCCTTTCCTGCCTCTG--CAGACCCAGGGAACATCTCCAAGCCCTGCCC-AGCCTGGCCTCAGAAGCCTCACTTCTGTCAGACTGAGC--CAATGAAGATG-----TGCAGACAGCAGG-----GCCTGCCCAGGGAAGGGGACTGTGCCGTGTGTGGCTGTGACTGAAATGCCCCAGG----------GTCCCCGCAG---CCTCCAGCAGGAGTGTGA-------------GCCATAGACAGACCATGGGCACGCTGT-GCGGCTGCCCCTGATCCCTGAAAGCTCCACTGTGGGAGCCTGGCCGTGGGCTGGCTTTCTAACTTCCTGGGGCA--C-ACCTAGCTGGAGTGCATCCGCTTCCTCTGGGCGATCCACACTCACAG-----CTGTCAGAAGCCACCTCCCTCATC-CAGGGAGGAGCAAACCAGAGCCTTTC-GAGGTGAAATG-----AGCGCCCTGAGAAGGACGAGCCCGAGGAG----TACACCCTCAG-----------CAGCTTTTCTAATACAC--TACAGATTTCCCCACTTTTTCTCATGCTCCCTGGCAAATGGACCCCAGTACGTTCCAGAGCCTAAAGACACATGGAAACGCTCTTAACTCTTTCAGAGACAGGAGCCCTGAAAAGTGGAAAGGTGGGTGCCCTGTCCCTAGAATAAGGCCCACATAAAGTTCCGCATACACGCTGAGCAGATGCA------GGACCCTGTTGTAGAACCCCCCATGTGGGGGCTTTCC-TAGAGTTCAAAGCTCTCATCAGA----------TCC-CGAGTCCTCAGAGGGAAAG---GGGTGACGCATGC--ACAGGGA-----------------------------------CTGGCGGACC---------G-TTTATGACAATGG-------AACCACACAGAAGCAAAGGGGGCAAACCCCGATAAAGGCTAACTTGGACTAAGGTCACA-GGCGAGCTCACAGAAGGCCC----------AGGAGACAGACGCATAGGGCAGAGGTCCAGA-----GGCACTGGAGGTCCAATCCCAAA------------GGCTCAAACCCTAATCCTTGGTCT-AAGCAACAGGTACCTTTTCTGTGATCTCCTTTATGGAAGCCACTGTGGTCACGTCGAAATGGCCACTCCTCCGCTTGTAGTCGACAAACAGGCAGTCTTTGACGCCCCGCTCGATGGCCTGCTGGGAGGCCTTCATCACCTCTGCAAAGCACAGACACAGG-AATGAGGATGCCCCCTGGCATGGTGAGCCGTC-ATGGCACATTCTAGGGAAGAGCACTGCAGAAGAGCT i canFam3.chr4 C 0 C 0 a score=101525.000000 s hg38.chr10_KI270825v1_alt 34968 39 + 188315 GTCAGTAACCCAGTCCTGCCATGCAT-------------------------------GAATCTGACCCAT s panTro4.chr10 76405559 39 + 133524379 GTCAGTAACCCAGTCCTGCCATGCAT-------------------------------GAATCTGACCCAT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76073600 39 - 133410057 GTCAGTAACCCAGTCCTGCCGTGCAT-------------------------------GAATCTGACCCAT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35016664 39 + 104879549 GTCAGTAACCCAGTCCTGTTGTGCAT-------------------------------GAATCTGACCGAT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73809538 38 - 130959383 GTCAGT-ACCCAGTCCTGCCATGCAT-------------------------------GAATCTGACCCAC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75371552 38 - 133195287 GTCAGT-ACCCAGTCCTGCCATGCAT-------------------------------GAATCTGACCCAC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73236263 38 - 125196307 GTCAGT-ACCCAGTCCTGCCGTGCAT-------------------------------GAATCTGACCCAC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72067994 38 - 125710982 CTCAGT-ACCCAGTCCTGCCATGCAT-------------------------------GAATCTGACCCAT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75525478 39 - 121768101 GTCAGTAACCTAGTCCTGCCACGCAT-------------------------------GGATCTGACCCAT i calJac3.chr12 C 0 C 0 s canFam3.chr4 27692712 58 + 88276631 ------------GTCCTGCTGTCCTTCCTTCCAGAGAAAGAAACAGAAGGCACCTGCTAACATGACCTGG i canFam3.chr4 C 0 C 0 e mm10.chr14 24138442 54 + 124902244 I a score=3861788.000000 s hg38.chr10_KI270825v1_alt 35007 1124 + 188315 GTCAGCAGGCTTCTGGAACACTGTGAAATCTGCCCCCCGGTACTGCCACCCACTGTGCACAGCTGGGCAGGCAGGTGGACAGGGACATAGAGACAAAGAGCCCAGTAGGCACAGAGGGTGCCCCGTGCCCCTTACCAAGGGGACATCTGCAGAACTTGCCAGGAGCCTCATTCACCAGCATCTCCTTCACCACGTCCAGCAAAGGCCCCAGAATCAGGACAGGCCTCAGAGCGGTGCAGTCCACCTTCTGGACCCGCTGATAGGCCAGGCTCACCGAATCT--GAGGGAGAGAGAGCAGCAGCGTCACGGAC-CCAGCTTGGAGTGGAGGACCTGAGTGGGGCTGGGGAACC-CCG--CTC---------------------------CCTGACCTCGCCCACTc-----------------------------------------------------------tggtttgcct----------------------------ggga----------ctcccccagcttcagcactgaaaatctcgtgtcccaggCACAACCGGGCATCGTCACCCCTGGAGTCCAGCATGAGCACCC------CCCATGCCCTCTGTGAACACCAGAGGCAGCTGGTCTCAACCACTCATCCCAGAGCTTCCTTCTGCTCTGATTTTTCCTCGTGGGTCG-ACGCCTGCTTCCCCTGCCCCATCTC-CATTCTCCTCTGCTCTCTGGCAAGGCAGCCTCTGGGGTTTGGCAGGTAAAGCTCCCACTCCCCAGGAAGGTGTGGTCAGTGTAACCCAGACCTGCC----CAGTGA-C--AGGTGAGGCCTCCCCAATCTGCAC------------GGCTAGAACAGGTGAGTGCTGTG------agccagctctggccatgcagttgaggataaccctta-agaaatggcagaggcacaagatggaagggacctgggt-cctggatgatcctcagaacgcaa-------------------tgcctctcccacatcaacca-cagctcagacttgtacatgacagagaaataaactgcccattatgcttaagccactgttatttggtttcagttaaagcagtcaaaccaa--tatcctagttgatacaTGCAGTAAACCTCCCCTTGCAC---CAAATGAATAAAGTCCTTGCAGGGAG-ACACAGTCTAAAACCCAGCAAG-ATCTTCCTGGCGTCTCCCTGGTATA--AGTCACTGTGCTGGAATCTCAGAAACATAAT--AAAGAATAGAACACAGAGTTCCTGCCATTAAAAAGCACACACTTTAACT s panTro4.chr10 76405598 1126 + 133524379 GTCAGGAGGCTTCTGGAACACTGTGAAATCTGCCCCCCGGTACTGCCACCCACTGTGCACAGCTGGGCAGGCAGGTGGACAGGGACATAGAGACAAAGAGCTCAGTAGGCACAGAGGGTGCCCCGTGCCCCTTACCAAGGGGACATCTGCAGAACTTGCCAGGAGCCTCATTCACCAGCATCTCCTTCACCACGTCCAGCAAAGGCCCCAGAATCAGGACAGGCCTCAGAGCGGTGCAGTCCACCTTCTGGACCCGCTGATAGGCCAGGCTCACCGAATCT--GAGGGAGAGAGAGCAGCAGCGTCACGGAC-CCAGCTTGGAGTGGAGGACCTGAGTGGGGCTGGGGAACC-CCA--CTC---------------------------CCTGACCTTGCCCACTc-----------------------------------------------------------tggtttgcct----------------------------ggga----------ctcccccagcttcagcactgaaaatctcgtgtcccaggCACAACCGGGCATCGTCACCCCTGGAGTCCAGCATGAGCACCC------CCCATGCCCTCTGTGAACACCAGAGGCAGCTGGTCTCAACCACTCATCCCAGAGCTTCCTTCTGCTCTGGTTTTTCCTCGTGGGTCG-ACGCCTGCTTCCCCTGCCCCATCTC-CATTCTCCTCTGCTCTCTGGCAAGGCAGCCTCTGGGGTTTGGCAGGTAAAGCTCCCACTCCCCAGGAAGGTGTGGTCAGTGTAACCCAGACCTGCC----CAGTGA-C--AGGTGAGGCCCCCCCAATCTGCAC------------GGCTAGAACGGGTGAGTGCTGTG------agccagctctggccatgcagttgaggataaccctta-agaaatggcagaggcacaagatggaagggacctgggt-cctggatgatcctcagaacgcaa-------------------tgcctctcccacatcaacca-cagctcagacttgtacacgacagagaaataaactgcccattatgcttaagccattgttatttggtttcagttaaagcagtcaaaccaa--tattctagttgatacaTGCAGTAAACCTCCCCTTGCAC---CAAATGAATAAAGTCCTTGCAGGGAG-ACACAGTCTAAAACCCAGCAAG-ATCTTCCTGGCGTCTCCCTGGTATATAAGTCACTGTGCTGGAATCTCAGAAACATAAT--AAAGAATAGAACACAGAGTTCCTGCCATTAAAAAGCACACACTTTAACT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76073639 1123 - 133410057 GTCAGGAGGCTTCTGGAACACTGTGAAATCCGCCCCCCGGTACTGCCGCCCACTGTGCACAGCTGGGCAGGCAGGCAGACAGGGACATAGAGACAAAGAGCCCAGTAGGCACAGAGGGTGCCCCGTGCCCCTTACCAAGGGGACATCTGCAGAACTTGCCAGGAGCCTCATTCACCAGTATCTCCTTCACCACATCCAGCAAAGGCCCCAGAATCAGGACAGGCCTCAGAGCAGTGCAGTCCACCTTCTGGACCCGCTGATAGGCCAGGCTCACCGAATCT--GAGGGAGAGAGAGCAGCAGCATCATGGAC-CCAGCTTGGAGTGGAGGACCTGAGTGGGGCTGGGGAACC-CCG--CTC---------------------------CCTGACCTTGCCCTCTc-----------------------------------------------------------tggtttgcct----------------------------ggga----------ctcccccagcttcagcactgaaaatctcatgtcccgggCACAACCGGGCATCATCACCCCTGGAGTCCAGCATGAGCACCC------CCCATGCCCTCTGTGAACACCAGAGGCAGCTGGTCTCAACCACTCATCCCAGAGCTTCCTTCTGCTCTGATTTTTCCTCGTGGGTCG-ACGCCTGCTTCCCCTGCCCCATCTC-CATTCTCCTCTGCTCTCTGGCAAGGCAGCCTCTGGGGTTTGGCAGGTAAAGCTCCCACTCCCCAGGAAGGTGTGGTCAGTGTAACCCAGACCTGCC----CAGTGA-CAGAGGTGAGGcctcccccatctgcac------------ggctagaacgggtgagtgctgtg------aaccagctctggccatgcagttgaggataaccctta-agaaatagcagaggcacaagatggaagggacctgggt-cctggatgatcctcagaacgcaa-------------------tgcctctcccacatcaacca-cagctcagacttgtacatgatagagaaataaactgcccattatgcttaagtcactgttacttggtttcagttaaagcagtcaaaccac--tatcccagttgatacaTGCAGTAAACCTCCCCTTGCAC---CAAATGAATAAAGTCCTTGCAGAGAG-ACACGATCTAAAACCCAGCAAG-ATCTTCCTGGCGTCTCcctggtata--agtcactgtgctggaatatcagaaacataat--a---aatagaacacagagttcctgccattaaaaagctcacactttaact i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35016703 1127 + 104879549 GTCAGGAGGCTTCTGGAACACTGTGAAATCCGCCCCCCGGTGCTGCTGCCCACTGTGCACAGCTGGGCAGGCAGGCGGACAGGGACATGGAGACAAAGAGCCCAGTAGGCACAGAGGGTGCCCCCTGCCCCTTACCAAGGGGACATCTGCAGAACTTGCCAGGCGCCTCATTCACCAGCATCTCCTTCACCACGTCCAGCAAAGGCCCCAGAATCAGGACAGGCCTCAGAGCGGTGCAGTCCACCTTCTGGACCTGCTGATAGGCCAGGCTCACCGAATCT--GAGGGAGAGAGAGCAGCAGCGTCACGGAC-CCAGCTTGGAGCGGAGGACCTGAGTGGGGCTGGGGAACC-CCG--CTC---------------------------CCTGACCTTGCCCACTc-----------------------------------------------------------ttgtttgcct----------------------------ggga----------ctcccccagcttcagcactgaaaatctcatgtccCTGGCACTACCGGGCATCGTCACCCCTGGAGTCCAGCATGAGCACCC------CTCATGCCCTCTGTGAACATCAGAGGCAGCTGGTCTCAACCACTCATCCCAGAGCTTCCTTCTGCTCTGATTTTTCCTTGTGGGTTG-ACGCCTGCTTCCCCTGCCCCATCTC-TATTCTCCTCTGTTCTCTGGCAAGGCAGCCTCTGGGGTTTGGCAGGTAGAGCTTCCACTCCCCAGGAAGGTATGGTCAGTGTAACCCAGACGTGCC----CAGTGA-CAGAGGTGAGGCCTCCCCCATCTGCAC------------GGCTAGAACAGGTGAGTGCTGTG------agccagctctggccatgcagttgaggataaccctta-agaaatggcagaggcacaagatggaagggacctgggt-cctggatgatcctcagaacgcaa------------------ttgcctctcccacatcaacca-cagctcagacttgtacatgacagagaaataagctgcccattatgcttaagccactgttatttggtttcagttaaagcagtcaaaccaa--tatcctagttgatacaTGCAGTAAACCTCCCCTTGCAC---CAAATGAATAAAGTCCTTGCAGGGAG-ATACGGTCTAAAACCCAGCAAG-ATCTTCCTGGCGTCTCCCTGGTATA--AGTCACTGTGCTGGAATCTCAGAAACATAAT--AAAGAATAGAACACAGAGTTCCTGCCATTAAAAAGTACACACTTTAGGT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73809576 1123 - 130959383 GTCAGGAGGC-TCTGAAATACTGCGAAATCCACCCCCCAGTGCTGCCGCCCATTGTGCACAGCTGGGCAGGCAGGCGCACAGGGACATAGAGACAAAGAACCCAGTAGGCATAGAGGGTGCCCCATGCCCCTTACCAAGGGGACATCTGCAGAACTTGCCAGGCGCCTCATTCACCAGCATCTCTTTCACCACGTCCAGCAAAGGCCCCAGAATCAGGACAGGCCTCAGAGCGGCACAGTCCACCTTCTGGACCCGCTGATAGGCCAGGCTCACCGAATCT--GAGGGAGAGAGAGCAGCAGCGTCACAGAC-CCAGCGTGGAGTGGAGGACCTGAGTGGGGCTGGGGTACC-CCG--CTC---------------------------CCCGACCTTGCCCACTc-----------------------------------------------------------tggtttgcct----------------------------ggga----------ctcccccagcttcagcactgaaaatctcatgtcccaggTACACCTGGGCATCGTCACCCCTGGAGTCCAGCATGAGCACCC------CCCACGCCCTCTGTGAACACCAGAGGCAGCTGGTCTCAACCACTCATCCCAGAGCTTCCTTCGGCTCTGATTTTTCCTCGTGGGTCC-ACACCTGCTTCCCCTGCCCCATCTC-CATTCTCCTCTGCTCTCTGGCAAGGCAACCTCTGGGGTTTGGCAGG-AGAGCTCCCACTCCCCAGGAAGGTGTGGTCAGTGTAACCCAGACCTGCC----CAGTGA-GAGAGGTGAGGCCTCCCCCATCTGCAC------------GGCTAGAACGCATGAGTGCTGTG------agccagctctggccatgcagttgaggataaccctta-agaaatagaagagtcacaagat----gggacctgggt-cctggatgatcctcagaacacaa------------------ctgcctctcccacatcaccca-cagctcaggcttataaatgacagagaaataaactgcccatcatgcttaagccactgttacttggtttcagttaaagcagtcaaaccaa--tatcctagttgatacaTGCAGTAAACCTCCCCTTGCAC---CAAATGAATAAAGTCCTTGCAGGGAGAACACGGTCTAAAACCCAGCAAGCATCTTCCTGGCATCTCCCTGGTATA--AGTCACCGTGCTGGCATGTCAGAAACATAAT--AAAGAATAGAACACAGAGTTCCTGCCATTAAAAAGGGCACGCTTTAACT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75371590 1123 - 133195287 GTCAGGAGGC-TCTGAAATACTGCGAAATCCGCCCCCCAGTGCTGCCGCCCATTGTGCACAGCTGGGCAGGCAGGCGCACAGGGACATAGAGACAAAGAACCCAGTAGGCATAGAGGGTGCCCCATGCCCCTTACCAAGGGGACATCTGCAGAACTTGCCAGGCGCCTCATTCACCAGCATCTCTTTCACCACGTCCAGCAAAGGCCCCAGAATCAGGACAGGCCTCAGAGCGGCACAGTCCACCTTCTGGACCCGCTGATAGGCCAGGCTCACCGAATCT--GAGGGAGAGAGAGCAGCAGCGTCACAGAC-CCAGCGTGGAGTGGAGGACCTGAGTGGGGCTGGGGTACC-CCG--CTC---------------------------CCCGACCTTGCCCACTc-----------------------------------------------------------tggtttgcct----------------------------ggga----------ctcccccagcttcagcactgaaaatctcatgtcccaggTACACCTGGGCATCGTCACCCCTGGAGTCCAGCATGAGCACCC------CCCACGCCCTCTGTGAACACCAGAGGCAGCTGGTCTCAACCACTCATCCCAGAGCTTCCTTCGGCTCTGATTTTTCCTCGTGGGTCC-ACACCTGCTTCCCCTGCCCCATCTC-CATTCTCCTCTGCTCTCTGGCAAGGCAACCTCTGGGGTTTGGCAGG-AGAGCTCCCACTCCCCAGGAAGGTGTGGTCAGTGTAACCCAGACCTGCC----CAGTGA-GAGAGGTGAGGCCTCCCCCATCTGCAC------------GGCTAGAACGCATGAGTGCTGTG------agccagctctggccatgcagttgaggataaccctta-agaaatagaagagtcacaagat----gggacctgggt-cctggatgatcctcagaacacaa------------------ctgcctctcccacatcaccca-cagctcaggcttataaatgacagagaaataaactgcccatcatgcttaagccactgttacttggtttcagttaaagcagtcaaaccaa--tatcctagttgatacaTGCAGTAAACCTCCCCTTGCAC---CAAATGAATAAAGTCCTTGCAGGGAGAACACGGTCTAAAACCCAGCAAGCATCTTCCTGGCATCTCCCTGGTATA--AGTCACCGTGCTGGCATGTCAGAAACATAAT--AAAGAATAGAACACAGAGTTCCTGCCATTAAAAAGGGCATGCTTTAACT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73236301 1124 - 125196307 GTCAGGAGGC-TCTGAAATACTGCGAAATCCGCCCCCCAGTGCTGCCGCCCACTGTGCACAGCTGGGCAGGCAGGCGCACAGGGACATAGAGACAAAGAACCCAGTAGGCATAGAGGGTGCCCCGTGTCCCTTACCAAGGGGACATCTGCAGAACTTGCCAGGCGCCTCATTCACCAGCATCTCTTTCACCACGTCCAGCAAAGGCCCCAGAATCAGGACAGGCCTCAGAGCGGCACAGTCCACCTTCTGGACCCGCTGATAGGCCAGGCTCACCGAAtct--gagggagagagagcagcAGCGTCACAGAC-CCAGCGTGGAGTGGAGGACCTGAGTGGGGCTCGGGTACC-CCG--CTC---------------------------CCCGACCTTGCCCACTC-----------------------------------------------------------TGGTTTGCCT----------------------------GGGA----------CTCCCCCAGCTTCAGCACTGAAAATCTCATGTCCCAGGTACACCTGGGCATCGTCACCCCTGGAGTCCAGCATGAGCACCC------CCCACACCCTCTGTGAACACCAGAGGCAGCTGGTCTCAACCACTCATCCCAGAGCTTCCTTCGGCTCTGATTTTTCCTCGTGGGTCC-ACACCTGCTTCCCCTGCTCCATCTC-CATTCTCCTCTGCTCTCTGGCAAGGCAACCTCTGGGGTTTGGCAGG-AGAGCTCCCACTCCCCAGGAAGGTGTGGTCAGTGTAACCCAGACCTGCC----CAGTGA-CAGAGGCGAGGCCTCCCCCATCTGCAC------------GGCTAGAACGCATGAGTGCTGTG------AGCCAGCTCTGGCCATGCAGTTGAGGATAACCCTTA-AGAAACAGAAGAGTCACAAGAT----GGGACCTGGGT-CCTGGATGATCCTCAGAACACAA------------------CTGCCTCTCCCACATCACCCA-CAGCTCAGGCTTATAAATGACAGAGAAATAAACTGCCCATCATGCTTAAGCCACTGTTACTTGGTTTCAGTTAAAGCAGTCAAACCAA--TATCCTAGTTGATACATGCAGTAAACCTCCCCTTGCAC---CAAATGAATAAAGTCCTTGCAGGGAGAACACGGTCTAAAACCCAGCAAGCATCTTCCTGGCATCTCCCTGGTATA--AGTCACCGTGCTGGCATGTCAGAAACATAAT-AAAAGAATAGAACACAGAGTTCCTGCCATTAAAAAGGGCACGCTTTAACT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72068032 1123 - 125710982 GTCAGGAGGC-TCTGAAATACTGCGAAATCCGTCCCCCAGTGCTGCCGCCTACTGTGCACAGCTGGGCAGGCAAGCGGACAGGGACATAGAGACAAAGAACCCAGTAGGCATAGAGGGTGCCCTGTGCCCCTTACCAAGGGGACATCTGCAGAACTTGCCAGGCGCCTCATTCACCAGCATCTCCTTCACCACGTCCAGCAAAGGCCCCAGAATCAGGACAGGCCTCAGAGCGGCACAGTCCACCTTCTGGACCCGCTGATAGGCCAGGCTCACCGAATCT--GAGGGAGAGAAAGCAGCAGCGTCACAGAC-CCAGCGTGGAGTGGAGGACCTGAGTGGGGCTGGGGTACC-CCG--CTC---------------------------CCTGACCTTGCCCACTc-----------------------------------------------------------tggtttgcct----------------------------ggga----------ctccctcagcttcagcactgaaaatctcatgtcccaggTACACCTGGGCATCGTCTCCCCTGGAGTCCAGCATGAGCACCC------CCCACGCCCTCTGTGAACACCAGAGGCAGCTGGTCTCAACCACTCATCCCAGAGCTTCCTTCGGCTCTGATTTTTCCTCGTGGGTCC-ACACCTGCTTCCCCTGCCCCATCTC-CATTCTCCTCTGCTCTCCGGCAAGGTAACCTCTGGGGTCTGGCAGG-AGAGCTCCCACTCCCCAGGAAGGTGTGGTCAGTGTAACCCAGACCTGCC----CAGTGA-CAGAGGTGAGGACTCCCCCATCTGCAC------------GGCTAGAACGCGTGAGTGCTGTG------agccagctctggccatgcagttgaggataaccctta-agaaatggaagagtcacaagat----gggacctgggt-cctggatgatcctcagaacacaa------------------ctgcctctcccacatcaccca-cagctcgggcttataaatgacacagaaacaaactgcccatcatgcttaagccactgttatttggtttcagttaaagcagtcaaaccaa--tatcctagttgacacaTGCAATAAACCTCCCCTTGCAC---CAAATGAATAAAGTCCTTGCAGGGAGAACACGGTCTAAAACCCAGCAAGCATCTTCCTGGCATCTCCCTGGTATA--AGTCACTGTGCTGGCATGTCAGAAACATAAT--AAAGAATAGAACACAGAGTTCCTGCCATTAAAAAGGGCACGCTTTAACT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75525517 1135 - 121768101 GTCAGGAAGCTTCTAGAACACTGTGGAATCCG---CCCGGAGCTGCTGCCCGCTGTGCACAGCTGCGCAGGCACGTGGACAAGGACACAGAGACAAAGAGTCCGGTAGGCACAGGTGGTGC-------CCCTTACCAAGGGGACATCTGCAGAACTTGCCAGGTGCCTCATTCACCAGCATCTCCTTCACCACATCCAGCAAAGGCCCCAGAATCAGGACAGGCCTCAGAGCAGTGCAGTCCACCTTCTGGACACGCTGATAGGCCAGGCTCACGGAATCTGAGAGAGAGAGAGAGCAGCAGTGTCATGGCC-CCAGCTTGGAGTGGAGGACCTGAGTGGGGCTGGGGAACC-CTGCTCTC---------------------------TCTGCCCTCGCCCACTc-----------------------------------------------------------tggtttgcct----------------------------agga----------ctcccccagcttcagcactggaagtccgatgt-ccgggcacacccAGGCATGTTCACCCCTGGGGTCCAGCATGAGCACCC------GCCATGCACTCTGTGAACACCAGAGGCAACTGGTCTCAACCACTCATCCCAGCACTTCCCTCTGCTCTGATTCTTCCTCGTGGGCCT-ACGCCTGCTTCCCCTGCCCCATCTC-CATTCTCCTCTGCTTCCTGGCAAGGCAGCCTCTGGGGTTTGGCAGGTAGAGCTCTCACTCCCCAGGAAGGTGTGGTCAGTGTAAGCCAGACCTGCC----TAGTGA-CAGATGTGAGG-CTCCCCCATCTGCAC------------TGCTAGAACGGGTAAGTGCTGTG------AACCAGTTCTGGCCATGCAATTGAGCACAACcctta-agaaatggcagagtcacaagacggaagggacctgggt-cctggatgatcctcagaacacaactgcatttcccagaacacctgcctcccccagaacacctg-cagctcaggcttgcacatgac--agaaataaaccgcccatcatgcttaagccactgttacttggtttcagttacagcagtcaaaccaa--tatcctagttgatacaTATAGTAAACCTCTCCTTGAAC---CAAATGAATAAAGTCCTTGCAGGGAG-ACACAGTCTAAAAACCAGTAAGCATCTTCCTGGCACCTCCCTGGTATA--AGTCACTGTGCTGGCATTTCAGAAACAC-AT--AAAGAGTAGAACACAGAGCTCTTGCCATTAAAAAGTACACACTTTAACT i calJac3.chr12 C 0 I 103 s mm10.chr14 24138496 1063 + 124902244 GTCTGTATGCATCAGGAAAACCCTTAGA-------CTCTGTA-TGCCAATTACTCTGCATGGCCAGAAAGGTAGATAAATACGGAC----AGACACA---CCTAGTGGGCACAGGGCAT---------CCCTTACCAAGTGGGCATCTGCAGAACTTGCCAGGTGCCTCATTCACCAGCATCTCTTTCACCACATCCAGTAAAGGTCCCAGGAGGAGAACAGGCCGAAGAGAGGTACAGTCCACTTTCTGGACCCGCTGATAGGCCAGGCTCACTGAGTCT--AAGAGAGACAGGGGGGCAGTGTCACGAGC-CCAGCCTGGACAGAAGAA----AGCAGAACTGGGCAGCC-ATG--CCCTGACCTTGTTCATCTACATCAGGCCCACCTGACCTTACTTACCT-----------------------------------------------------------GGGCATGTCTGTCTTCTTTATCTCTCAGAACTAGGCCAGGGATAGTGGCCAGCTTGTCTGGCTTCATCAGGACAAGTTCTACATCTCAGACACACCAGAACATGACCG-CTATGGAGTCGGTCAAGAGCCTACAGGAGTCTCTCTGCCTCTGAGGACACTGGAAACAACTGATGT---CCAATCATCTTA---------CCTACTCCAGGTCTTCCTCAATTATC-----CCTGC--CCACTACACCACTTCATGTCTTCCTCTGCTCACTTGAGACACAG-CTCCAAGGTTTGGAAG--------------CCACAGGA---CGTGGACAA-GAAGGATAGAGGTGAT----GAGGTA-CATCGTTGGCCCCTGCCC---TTGAA---------------TCAGAAGAGGTG-GTGCTCTG------AGCCAGCTCTGCCCATAC------------------------------AGACAGAAGACAGAAGGGCCCTGGGT-GTTGA-------CCACAGGGCCA----------------------CTCCCCCTGGGTGCCCACCAGCTCAG-CCTGTATGCTGCAGAAGGATAAGCCTCCTGTGAGGCTTCAG---CTGCTGCTTCAGTTTAGCTTTAGTGATCAGGCAAT--CTTCCTAGTTAACACA--ATGGGAACCTCACCCT-------CAGATGCACAAAGTTCTCACAGGAAG-AGATGG-------CCAGGCAACGGCCTTCCTAGAGACTCCCGGATGCA--G-----TACACTGGCTTCTCAGAAACACAA---AAAGATACAAGTGTCTGGCCTCTGCCCTTTGGAAGCTCACGC--TAACT i mm10.chr14 I 54 C 0 s canFam3.chr4 27692770 1070 + 88276631 GTCAGAAGGGCTCTGAGACACCATGGG--------CCCAGCCCTG-------------------------------------GGAGATGGGAGGACATAGTCCAACAGGCACAGAGGGTGC-------CCCTTACCGAGGGGGCATCTGCAGAACTTGCTGGGTGCCTCATTCACCAGCATTTCCTTCACCACGTCCAGTAAAGGCCCCAGAATCAGGACAGGCCTCAGGGAGGTGCAGTCTACTTTCTGGACCCGCTGATAGGCGAGGCTCACTGAATCT--GAG---GAGAGAGGAGCAGTGTCACAGGCACTCACCTGGAGCAGAGGGAGGGAGAGAGGCCGGGGACCCACTG--CTG---------------------------CCCTCATGTGCTCACCCCAGGCAGGTCCACCCCTCAGTCCACAAATCCAGAGCCAGGCAGGGTGAGCAGCTTAGCACAGTTCACCT----------------------------GGGG----------CCTGCCCAAGTTTAGGGCTG-AGTCCCTACGTCCTAGGCAGACCAGGGCATGGTCACTCCTGGAGTCCAGCACAAGTGTCC------CT-----GCTCTGCAAACACCCAATACAGCCAGTCTAGAACAGTCATTTTAGCCCTTCCTTCTGCCCAAAGTCTTCCTCACTTGTCCTGGGCCTGCTCCCCTCGCCCCGACTA-C-CCATGCTCTGCTTCCTAGAATTGCAACCTCCCCGG-------------------------CAGGTAGGTATGCTCA-CATGACCCAGACCTGCCTGAGCAGTTAGCAGAGGTGAAG-CTCCCACTTCCTCACCCCTTTCCCAGGGGCTGAAAAGGACAAGACCTGGGGTGCTCAGCCTCCTCTGACCCTGCTGATGAGGATAACCTTTAGAAAAatgacagagctaaaagactgaagggacttgggtccctggaggatccccagaatggag------------------ctgccttcctggaaccacagaccagctgggacttttacatagtagagaaa-----------ttacactttGGCTACTCTCATCTGGTCTCAGTTCCAGGTGTCAAACCAAGGTGTCCCAGGTGATCTGTGTAGGACACCTCCACTTCCCCAAGTGAATGAAAAAAGTCCTTGCAGAAAG-AGACGGCTTAAAATC---------------------------AGTATC--AGGCACCACGTTGGCACCTC-GAAACACTTTGGAAAGAATACAAAACAAG-------------------------TCTAACC i canFam3.chr4 C 0 C 0 a score=654397.000000 s hg38.chr10_KI270825v1_alt 36131 206 + 188315 AGAGTCACAACAGAGCAACACATGAACAG--CAAGAGAGCACG-CAAGAGCTGCCTGGCAATTCCA-----------------------GGAGCGGCG-GGCTTCAGTAGACACTGT--GGCTGGATGACAGGGTG-AAA------AGACCACTTGGG--CAGGCCCAGGAGGGAAGTGGGATGAGA-----GTCTCCAGAAAGAGCAGGGCAAGAGGATGAGTATGGAGATGATGGGGAGGGCAGAGC s panTro4.chr10 76406724 211 + 133524379 AGAGTCACAACAGAGCAACACATGAACAG--CAAGACAGCACG-CAAGAGCTGCCTGGCAATTCCA-----------------------GGAGCGGCG-GGCTTCAGTAGACACTGC--GGCTGGATGACAGGGTG-AAA------AGACCACTTGGG--CAGGCCCAGGAGGGAAGTGGGATGAGAACGGTGTCTCCAGAAAGAGCAGGGCAAGAGGGTGAGTATGGAGATGATGGGGAGGGCAGAGC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76074762 212 - 133410057 agagtcacaacagagcaacacatgaacag--CAAGACAGCACG-CAAGAGCTGCCTGGCAATTCCA-----------------------GGAGTGGCA-GGCTTCAGTAGACACTGC--AGCTGGATGACAGGGTGAAAA------AGACCACTTGGG--CAGGCCCAGGAGGGAAGTGGGATGAGAGCGGTGTCTCCAGAAAGAGCAGGGCAAGAGGGTGAGTATGGAGGTGACAGGGAGGGCAGAGC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35017830 211 + 104879549 AGAGTCACAACAGAGCAACACATGAACAG--CAAGACAGCATG-CAAGAGCTGCCTGGCAATTCCA-----------------------GGAGCGGCA-GGCTTCAGTAGACACTGT--GGCTGGATGACAGGGTG-AAG------AGACCACTTGGG--CAGGCCCAGGAAGGAAGTGGGATGAGAGCGGTGTCTCCAGAAAGAGCAGGGCAAGAGGGTGAGTATGGAGGTGATGGGGAGGGCAGAGC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73810699 211 - 130959383 AGAGTCACAACAGAGCAACACATGAACAG--CAAGACAGCACG-CAAGAGCTGCCTGGCAATTCCA-----------------------GGAGTGACA-GGCTTCAGTAGACACTGT--GGCTGGATGACAGGGTG-AAG------AGACCACTTGAG--CAGGCCCAGGAGGCAAGTGGGATGAGAGCGGTGTCTCCAGAAAGAGCAGGGCAAGAGGGTAAGTATGGAGGTGACAGGGAGGGCAGAGC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75372713 211 - 133195287 AGAGTCACAACAGAGCAACACATGAACAG--CAAGACAGCACG-CAAGAGCTGCCTGGCAATTCCA-----------------------GGAGTGACA-GGCTTCAGTAGACACTGT--GGCTGGATGACAGGGTG-AAG------AGACCACTTGAG--CAGGCCCAGGAGGCAAGTGGGATGAGAGCGGTGTCTCCAGAAAGAGCAGGGCAAGAGGGTAAGTATGGAGGTGACAGGGAGGGCAGAGC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73237425 211 - 125196307 AGAGTCACAACAGAGCAACACATGAACAG--CAAGACAGCACG-CAAGAGCTGCCTGGCAATTCCA-----------------------GGAGCGACA-GGCTTCAGTAGACACTGT--GGCTGGATGACAGGGTG-AAG------AGACCACTTGAG--CAGGCCCAGGAGGCAAGTGGGATGAGAGCGGTGTCTCCAGAAAGAGCAGGGCAAGAGGGTAAGTATGGAAGTGACAGGGAGGGCAGAGC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72069155 211 - 125710982 AGAGTCACAACAGAGCAACACATGAACAG--CAAGACAGCACG-CAAGAGTTGCCTGGCAATTCCA-----------------------GGAGCAACA-GGCTTCAGTAGACACTGT--GGCTGGATGACAGGGTG-AAG------AGACCACTTGGG--CAGGCCCAGGAGGCAAGTGGGATGAGAGCAGTGTCTCCAGAAAGAGCAGAGCAAGAGGGTAAGTATGGAGGTAACGGGGAGGGCAGAAC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75526755 201 - 121768101 AGTGTCACAACAGAGCAACACATGAACAG--CAAGACAGCACA-CAAGAGCTGCCTGGCAATTCCA-----------------------GGAGTGGCAGGGCTTCAGCAGATACTGT--AGCTGGATGACAGGGGAAAAG------AGACCACTTGGG--CAGGCCCAGGAAGGAAGTGGGATGAGAGTGGTATCCCCAGAAACAGCAGGGCAGGAGGG------------TGACAGGGAGGGCAGACC i calJac3.chr12 I 103 C 0 s mm10.chr14 24139559 194 + 124902244 GGGGTTCCAAGGCAGCAACAC-CAGATGC--CCAGACAG--------ATGCTGTATGAAGATGCCA-----------------------GGTGTGAGA--------GTGAAAACT-T--AGGGGAGTGCTAGGGAG-ACGTAGCTCAGACTGGATGAGGCCAGACTTAAGATGGGGGCAGGAAGAGCAGG-------CTGAAAGAG-GGCCCAAGGTGACTGACAGGTAGATG-TAGGGAGGCCAGGAC i mm10.chr14 C 0 I 4475 s canFam3.chr4 27693840 218 + 88276631 GGTGTCACAAGACAGCATCTCGTGAAAAGGCCCAATGACCACGCCAAGAGCTGC-TCACAACTCCAGGCAACAGAACAAGAAATCCCAGGGAGCAGCAGGGGTTAAACAAATACTGTGCGGCCCG-----AAGATG-AAG------AGACTGGC--AG--CAGGCCCAGGAGGG--GTGCAATG-GAGCTGCG-CCCCTGGCCGAGCACGGCAGGATGGTGGGGCTGAAGTGGCCAAGG---------- i canFam3.chr4 C 0 C 0 a score=310703.000000 s hg38.chr10_KI270825v1_alt 36337 96 + 188315 ACAAGATGACTGCAGGCTTGGGAGGAAGGGTCCATGAGAGGCTTGGCCTGGAGGGATCTGTACGCA---TATGCAGAACAAGGAGTGACTGCAGAGCAG s panTro4.chr10 76406935 96 + 133524379 ACAAGATGACTGCAGGCTTGGGAGGAAGGGTCCATGAGAGGCTTGGCCTGGAGGGATCTGTACGCA---TATGCAGAACAAGGAGTGACTGCAGAGCAG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76074974 96 - 133410057 ACAAGATGACAGCAGGCTTGGGAGAAAGGGTCCATGACAGGCTTGGCCTGGAGGGATCTGTACGCA---TATGCAGAGCAAGGAGTGACTGCAGAGCAG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35018041 96 + 104879549 ACAAGATGACAGCAGGCTTGGGAGGAAGGGTCCATGAGAGGCTCGGCCTGGAGGGATCTGTACGCA---TACACAGAGCAAGGAGTGACTGCAGAGCAG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73810910 96 - 130959383 ACAAGATGGCAGCAGGCTTGGGAGGAACGGTCCATGAGAGGCTCGGCCTTGAGGGATCTGTACGCA---TATGCAGAGCAAGGAGTGACTGCAGAGTAG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75372924 96 - 133195287 ACAAGATGGCAGCAGGCTTGGGAGGAACGGTCCATGAGAGGCTCGGCCTTGAGGGATCTGTACGCA---TATGCAGAGCAAGGAGTGACTGCAGAGTAG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73237636 96 - 125196307 ACAAGATGGCAGCAGGCTTGGGAGGAACGGTCCATGAGAGGCTCGGCCTGGAGGGATCTGTACGCA---TATGCAGAGCAAGGAGTGACTGCAGAGTAG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72069366 96 - 125710982 ACAAGATGGCAGCAGGCTTGGGAGGAAGGGTCCATGAGAGGCTCGGCCTGGAGGGATCTGTACGCA---TATGCAGAGCAAGGAGTGACTGCAGAGTAG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75526956 96 - 121768101 ACAAGACAACAGCAGGCTTAGGAGGAAGGGTCCATGAGCGGCTCGGCCAGGAGGGATCTGTACGCA---TATGCAGAGCAAGGAGTGACTACAGAGCAG i calJac3.chr12 C 0 I 23 s canFam3.chr4 27694058 71 + 88276631 -----------------------GGAAAGGGCAAGGAAAGGCCCGGCCTGGAAGG--CTGCACACAAGCTGTGCGG--CCAGGCCTGACTGGGGA-CAG i canFam3.chr4 C 0 C 0 e mm10.chr14 24139753 4475 + 124902244 I a score=174061.000000 s hg38.chr10_KI270825v1_alt 36433 68 + 188315 GCACAGGGACCAGGAGGCAGAAGGCTCAGGA----GAAC-------------------ACAAGCACAGTG---------CCA------GCTGCAGCAGCAGGCTCC s panTro4.chr10 76407031 68 + 133524379 GCACAGGGACCAGGAGGCAGAAGGCTCAGGA----GAAC-------------------ACAAGCACAGTG---------CCA------GCTGCAGCAGCAGGCTCC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76075070 68 - 133410057 GCACGGGGACCAGGAGGCAGAAGGTTCAGGA----GAAC-------------------ACAAGCACAGTG---------CCA------GCTGCAGCAGCAGGCTCC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35018137 68 + 104879549 GCAAGGGGACCAGGAGGCAGAAGGCTCAGGA----GAAC-------------------ACAAGCACAGTG---------CCA------GCTGCAGCAGCAGGCTCC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73811006 68 - 130959383 GCACAGGGACCAGGAGGCAGAGGTCTCAGGA----GAAC-------------------ACAAGCACAGTG---------CCA------GCTGCAGCAGCAGGCTCC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75373020 68 - 133195287 GCACAGGGACCAGGAGGCAGAGGTCTCAGGA----GAAC-------------------ACAAGCACAGTG---------CCA------GCTGCAGCAGCAGGCTCC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73237732 68 - 125196307 GCACAgggaccaggaggcagaggtctcagGA----GAAC-------------------ACAAGCACAGtg---------cca------gctgcagcagcaggCTCC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72069462 68 - 125710982 GCACAGGGACCAGGAGGCAGAAGTCTCAGGA----GAAC-------------------ACAAGCACAGTG---------CCA------GCTGCAGCAGCAGGCTCC i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27694129 102 + 88276631 AAGGAGGGGCCA----GCgtgggacccaggaaattgaacaaaaatcccctacccctggacaagcagagtaggactaactccattttgtgctgcacctgccacctcc i canFam3.chr4 C 0 I 403 e mm10.chr14 24139753 4475 + 124902244 I e calJac3.chr12 75527052 23 - 121768101 I a score=34484.000000 s hg38.chr10_KI270825v1_alt 36501 14 + 188315 ATGAAGAGCAACCT s panTro4.chr10 76407099 14 + 133524379 ATGAAGAGCAACCT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76075138 14 - 133410057 ATGAAGACCAACCT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35018205 14 + 104879549 ATGAAGACCAACCT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73811074 14 - 130959383 ATGAAGACCAACCT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75373088 14 - 133195287 ATGAAGACCAACCT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73237800 14 - 125196307 ATGAAGACCAACCT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72069530 14 - 125710982 ATGAAGACCAACCT i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27694231 403 + 88276631 I e mm10.chr14 24139753 4475 + 124902244 I e calJac3.chr12 75527052 23 - 121768101 I a score=789943.000000 s hg38.chr10_KI270825v1_alt 36515 279 + 188315 GTGGGCAAACTC--AGGGAGTAAGTAAAGTCTCTCCTCTCCTCTTGCCCTGTCCCTGTGTGTGTGTTTTTTAGAAGTGATCACTgctgggcatggtggctc-acgtctgtaatcccagcactttgggaggctgaggcaggtggatcgcttgaggtcaagagtttgagaccagcctggccaataaggcaagaccccttctctactaaaaatacaaaaattagccgggtgtgctggcgcacacctgtaatcccagctactcaggaagctgaagcacaacaatca s panTro4.chr10 76407113 274 + 133524379 GTGGGCAAACTC--GGGGAGTAAGT-----CTCTCCTCTCCTCTTGCCCTGTCCCTGTGTGTGTGTTTTTTAGAAGTGATCACTgctgggcatggtggctc-acgtctgtaatcccagcactttgggaggctgaggcaggtggatcgcttgaggtcaagagtttgagaccagcctggccaataaggcaagaccccttctctactaaaaatacaaaaattagccgggtgtgctggcgcacacctgtaatcccagctactcaggaggctgaagcacaacaatca i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76075152 281 - 133410057 GTGGGCAAACTCAGGGGGAGTAAGTAAAGTCTCGCCTCTTCTCTTGCCCTGTCCCTGTGTGTGTGTTTTTTAGAAGTGATCACTgctgggcatggtggctc-atgtctgtaatcccagcactttgggaggctgaggcaggtggatcgcttgaggtcaggagtttgagaccagcctggccaataaggcaagaccccgtctctactaaaaatacaaaaattagccgggtgtgctggagcacacctgtaatcccagctactcgggaggctgaagcacaacaatca i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35018219 270 + 104879549 GTG-----------GGGGAGTAAATAAAGTCTCTCCTCTTCTCTTGCCCTGTCCCTGTGTGTGTGTTTTTTAGAAGTGATCACTgctgcgcatggtggctc-acgtctgtaatcccagcactttgggaggctgaggcaggtagattgcttgaggtcaggagtttgagaccagcctggccaataaggcaagaccccgtctctaccaaatatacaaaaattagcccggtgtgctcgcgcacacctgtaatcccagctactcgggaggctgaagcacaacgatca i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73811088 278 - 130959383 GTGGGCAAACTCAGGGGGAATAAGTCAAGTCTCTCCTCTTCCCTTGCCCTGTCCCCACGTGTG---TTTTTAGAAGTGATCTCTgctgggagtggtggctc-acgtcggtaatcccagcactttgggaggctgaggcacgtggatcgcttgaggtcaggagtttgagaccagcctggccaatatggcaagaccccatctctactaaaaatacaaaaattagctgggtatggtggcgtgcgcctgtagtcccagccacttgggaggctgaagcacaacaatca i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75373102 278 - 133195287 GTGGGCAAACTCAGGGGGAATAAGTCAAGTCTCTCCTCTTCCCTTGCCCTGTCCCCACGTGTG---TTTTTAGAAGTGATCTCTgctgggagtggtggctc-acgtcggtaatcccagcactttgggaggctgaggcacgtggatcgcttgaggtcaggagtttgagaccagcctggccaatatggcaagaccccatctctactaaaaatacaaaaattagctgggtatggtggcgtgcgcctgtagtcccagccacttgggaggctgaagcacaacaatca i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73237814 278 - 125196307 GTGGGCAAACTCAGGGGGAATAAGTCAAGTCTCTCCTCTTCCCTTGCCCTGTCCCCGCGTGTG---TTTTTAGAAGTGATCtctgctgggagtggtggctc-acgtcggtaatcccagcactttgggaggctgaggcacgcggatcgcttgaggtcaggagtttgagaccagcctggccaatatggcaagaccccatctctactaaaaatacaaaaattagctgggtatggtggcgtgcgcctgtagtcccagccacttgggaggctgaagcacaacaatca i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72069544 278 - 125710982 GTGGGCAAACTCAGGGGGAATAAGTCAAGTCTCTCCTCTTCCCTTGCCCTGTCCCCACATGTG---TTTTTGGAAGTGATCTCTgctgggagtggtggctc-acgtcggtaatcccagcactttgggaggctgaggcacgtggatcgcttgaggtcaggagtttgagaccagcctggccaatatggaaagaccccatctctactaaaaatacaaaaattagctgggtatggtggtgtgcgcctgtagtcccagccacttgggaggctgaagcacaacaatca i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75527075 282 - 121768101 GTGGGCAAACTCAAGGGCAGTAAGTAAAGTCTCTCCTCTTCCCTTGCCCCATCCCCATGTGTGTGCTTTTTAGAAGTGATCACTgccgagcgccatgacttaacgcttgtaatcccagcattttggaaggctgaggcaggtggatcgtttgaggtcaggagtttgcgaccagcctggccaatatggcaagactgcatctctactaaaaatacaaaaattagccgggtatggtggtgcacatctgtaatcccagctactcgggagactgaggcacgagaatca i calJac3.chr12 I 23 C 0 e canFam3.chr4 27694231 403 + 88276631 I e mm10.chr14 24139753 4475 + 124902244 I a score=29201.000000 s hg38.chr10_KI270825v1_alt 36794 8 + 188315 cttgaacc s panTro4.chr10 76407387 8 + 133524379 cttgaacc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76075433 8 - 133410057 cttgaacc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35018489 8 + 104879549 cttgaacc i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73811366 8 - 130959383 cttgaacc i rheMac3.chr9 C 0 I 112 s macFas5.chr9 75373380 8 - 133195287 cttgaacc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73238092 8 - 125196307 cttgaacc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72069822 8 - 125710982 cttgaacc i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75527357 8 - 121768101 cttgaact i calJac3.chr12 C 0 C 0 s canFam3.chr4 27694634 8 + 88276631 cttgggca i canFam3.chr4 I 403 C 0 e mm10.chr14 24139753 4475 + 124902244 I a score=236210.000000 s hg38.chr10_KI270825v1_alt 36802 72 + 188315 caggaggcggaggttgcagtgagccgagactgca-------------ccactgtactcc------------agcctgggc--aacagagcaagactaga s panTro4.chr10 76407395 72 + 133524379 caggaggcggaggttgcagtgagccgagactgca-------------ccactgtactcc------------agcctgggc--aacagagcaagactaga i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76075441 72 - 133410057 caggaggcggaggttgcagtgagccaagactgca-------------ccactgtactcc------------agcctgggc--aacagagcaagactaga i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35018497 72 + 104879549 caggaggcggaggttgcagtgagccgagactgca-------------ccactgtactcc------------agcctgggc--aacagagcaagactgga i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73811486 72 - 130959383 caggaggcggaggttgcagtgagctgagactgta-------------ccactgtactcc------------agcctgggc--aacagagcaagactaga i rheMac3.chr9 I 112 C 0 s macFas5.chr9 75373388 72 - 133195287 caggaggcggaggttgcagtgagctgagactgca-------------ccactgtactcc------------agcctgggc--aacagagcaagactaga i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73238100 72 - 125196307 caggaggcggaggttgcagtgagctgagactgca-------------ccactgtactcc------------agcctgggc--aacagagcaagactaga i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72069830 72 - 125710982 caggaggcggaggttgcagtgaactgagactgtg-------------ccactgtactcc------------agcctgggc--aacagagcaagactaga i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75527365 72 - 121768101 caggaggcggagtttgcagtgagccgagattgca-------------ccactgtactcc------------agcctgggc--agcagagcaagactcta i calJac3.chr12 C 0 C 0 s canFam3.chr4 27694642 99 + 88276631 caacaGCCAGAGGCAGGGCTGCGCCTGGACAGTGTGGTGCCAGGTGCCGGCTGGGCTCCACGCGGACCAAGATCCTGGACAGAACTGAGCAGGAAGTGA i canFam3.chr4 C 0 I 48 e mm10.chr14 24139753 4475 + 124902244 I a score=47996.000000 s hg38.chr10_KI270825v1_alt 36874 24 + 188315 tctcaataaaaata------------aata---aaataa s panTro4.chr10 76407467 24 + 133524379 tctcaataaaaata------------aata---aaataa i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76075513 24 - 133410057 tctcaataaaaata------------aata---aaataa i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35018569 27 + 104879549 tctcaataaaaata------------aataaataaataa i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73811558 38 - 130959383 gctcaataaaaataaataaataaat-aataaataaataa i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75373460 38 - 133195287 gctcaataaaaataaataaataaat-aataaataaataa i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73238172 27 - 125196307 gctcaataaaaata------------aataaataaataa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72069902 38 - 125710982 gctcaataaaaataaataaataaataaataaat-aaTAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75527437 25 - 121768101 tttcgataaaaata------------aataaataaat-- i calJac3.chr12 C 0 C 0 e canFam3.chr4 27694741 48 + 88276631 I e mm10.chr14 24139753 4475 + 124902244 I a score=1810135.000000 s hg38.chr10_KI270825v1_alt 36898 582 + 188315 taaaaCTGATCATTATCCACATACATCCACACAGTCTTTTACACAG--------------CACTTCCTAACCTGGTGACCAGCAGCTCTGT--TGTTTAAAACTG--GAGGAGGGTTTGGTGGTCACATTCACCACCTTGGAAC-CCCATGTGGTCCCGAGTGAAGGCTCTGAGGAGGAGTCACG----GGGCAAAGAACTTCCTCCGAGAGGAGTTtacataaacaaatcctctctgtaacaaatctgaa---cctcacggataaggccagc-actcctctctgataccccttccccaacctc----agt--ccccactgggctccttgaaggtaaccactattatgagctggaagtgtatcc----------tagttcttcttataaactga-tttttatatgctaaagaaaacctagaatatatattgtttaagtgtgtc--------------------tgtGGATACTTTATAACTCGCTCCTT------------GTCCGGGGCTGTGTTTCTGGGAGGCATCCCTGGTGATTCGTCGTGGGCCGCTCTGCTCCTTTTGGGCATCCCATTAACACTTATTCTGGATCGACTTATCCACTTCCCTGCTGATG----GACACTAC--GTCACCATTCCCTCCATTTACTAGTATAAGAAT s panTro4.chr10 76407491 582 + 133524379 taaaaCTGATCATTATCCACATACATCCACACAGTCTTTTACACAG--------------CACTTCCTAACCTGGTGACCAGCAGCTCTGT--TGTTTAAAACTG--GAGGAGGGTTTGGTGGTCACATTCACCACCTTGGAAC-CCCATGTGGTCCCGAGTGAAGGCTCTGAGGAGGAGTCACG----GGGCAAAGAACTTCCTCCGAGAGGAGTTtacataaacaaatcctctctgtaacaaatctgaa---cctcacggataaggccagc-actcctctctgataccccttccccaacccc----agt--ccccactgggctccttgaaggtaaccactattatgagctggaagtgtatcc----------tagttcttcttataaactga-tttttatatgctaaagaaaacctagaatatatattgtttaagtgtgtc--------------------tgtGGATACTTTATAACTCGCTCCTT------------GTCCGGGGCTGTGTTTCTGGGAGGCATCCCTGGTGATTCGTCGTGGGCCGCTCTGCTCCTTTTGGGCATCCCATTAACACTTATTCTGGATTGACTTATCCACTTCCCTGCTGATG----GACACTAC--GTCACCATTCCCTCCATTTACTGGTATAAGAAT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76075537 581 - 133410057 taaaaCTGATCATTATCTACAAACATCCACACAGTCTTTTACACAG--------------CACTTCCTAACCTGGTGACCAGCAGCTCTGT--TGTTTAAAACTG--GAGGAGGGTTTGGTGGTCACAATCACCACCTTAGAAC-CCCATGTGGTTCTGAGTGAAGGCTCTGAGGAGGAGTCA-A----GGGCAAAGAACTTCCTCCGAAAGGAGTTTACATAAACAAATCCTTTCTGTAACAAATCTGAA---CCTCATGGATAAGGCCAGC-ACTCCTCTCTGATACCCCTTCCCCAACCCC----AGT--CCCCACTGGCCTCCTTGAAGGTAACCACTATTATGAGCTGGAAGTGTATCC----------TAGTTCTTCTTATAAACTGA-TTTTTATATGCTAAAGAAAACCTAGAATATATATTGTTTAAGTGTGTC--------------------TGTGGATACTTTATAACTCGCTCCTT------------GTCCGGGGCTGTGTTTCTGGGAGGCATCCCTGGTGATTCGTCGTGGGCCTCTCTGCTCCTTTTGGGCATCCCATTAACACTTACTCTGGATCGACTTATCCACTTCCCTGCTGATG----GACACTAC--GTCACCATTCCCTCCATTTACTGGTATAAGAAT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35018596 582 + 104879549 taaaaCTGAACATTATCCACATACATCCACAGAGTCTTTTACACAG--------------CACTTCCTAACTTGGTGACCAGCAGCTCTGT--TGTTTAAAACTG--GAGGAGGGTTTGGTGGTCACATTCACCACCTTGGAAC-CCCACGTGGTTCTGAGTGAAGGCTCTGAGGAGGGGTCACG----GGGCAAAGAACTTCCTCCAAGAGGAGTTtacataaacaaatcctttctgtaacaaatctgaa---cctcacggataaggccagc-actcctctctgataccccttccccaacccc----agt--ccccacctgccttcttgaaggtaaccactattatgagctggaagtgtatcc----------tagttcttcttataagctga-tttttatatgctaaagaaaacctagaatatatattgtttaagtgtGCC--------------------TGTGGATACTTTATAACTCACTCCTT------------GTCCGGGGCTGTGTTTCTGGGAGGCATCCCTGGTGATTCGTCGTGGGCCTCTCTGCTCCTTTTGGGCATCCCATGAACACTTACTTTGCATCAACTTATCCACTTCCCTGCTGATG----GACACTAC--GTCACCGTTCCCTCCATTTACTGGTATAAGAAT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73811596 577 - 130959383 taaaACTGATCATTATCCACATACATCCATACAGTCTTTTACACAG--------------CATTGCCTAACCTGGTGACCAGCAGCTCTGT--TGTTTAAAACT-----GGAGGGTTTGGTGGTCACATTCACCACCTTGGAAC-CCCATGTGGTTCTGAGTGAAGGTTCCCAGGAGGAGTCAGG----GGACAAAGAACTTCCTCCGAGAGGAGTTtacacaaacaaatcctttctgtaacaaatccgaa---cctcatggataaggccagcaactcctctctgatatcccttccccaacccc----agt--ccccaccggcccacttgaaggtaaccactattatgagctggaagtgtaccc----------tAG---TTCTCATAAACTGA-CTTTTATATGCTAAAGGAAACCTGAAATATACATTGTTTAAGTGTGTC--------------------TGTGGATATTTTGTAACTCGCTCCTT------------GTCTGGGGCTGTGTTTCTGGGAGGCATCCCTGGTGATTCCTGGTGGGCCTCTCTACTCCTTTTGGGCATGCCATGAACACTTCCTCTGCATCGACTTATCCACTTCCTTGCTGATG----TACACTAT--GTCACCGTTCCCTCCATTTACTGGTATAAGAAT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75373498 577 - 133195287 taaaACTGATCATTATCCACATACATCCATACAGTCTTTTACACAG--------------CATTGCCTAACCTGGTGACCAGCAGCTCTGT--TGTTTAAAACT-----GGAGGGTTTGGTGGTCACATTCACCACCTTGGAAC-CCCATGTGGTTCTGAGTGAAGGTTCCCAGGAGGAGTCAGG----GGACAAAGAACTTCCTCCGAGAGGAGTTtacacaaacaaatcctttctgtaacaaatccgaa---cctcatggataaggccagcaactcctctctgatatcccttccccaacccc----agt--ccccaccagcccacttgaaggtaaccactattatgagctggaagtgtaccc----------tAG---TTCTCATAAACTGA-CTTTTATATGCTAAAGGAAACCTGAAATATACATTGTTTAAGTGTGTC--------------------TGTGGATATTTTGTAACTCGCTCCTT------------GTCTGGGGCTGTGTTTCTGGGAGGCATCCCTGGTGATTCCTGGTGGGCCTCTCTACTCCTTTTGGGCATGCCATGAACACTTCCTCTGCATCGACTTATCCACTTCCTTGCTGATG----TACACTAT--GTCACCGTTCCCTCCATTTACTGGTATAAGAAT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73238199 577 - 125196307 taaaactgatcATTATCCACATACATCCATACAGTCTTTTACACAG--------------CATTGCCTAACCTGGTGACCAGCAGCTCTGT--TGTTTAAAACT-----GGAGGGTTTGGTGGTCACATTCACCACCTTGGAAC-CCCATGTGGTTCTGAGTGAAGGTTCCGAGGAAGAGTCAGG----GCACAAAGAACTTCCTCCGAGAGGAGTTTACATAAACAAATCCTTTCTGTAACAAATCCGAA---CCTCATGGATAAGGCCAGCAACTCCTCTCTGAtaccccttccccaacccc----agt--cCCCACCGGCCCCCTTGAAGGTAACCACCATTATGAGCTGGAAGTGTACCC----------TAG---TTCTCATAAACTGA-CTTTTATATGCTAAAGGAAACCTGAAATATACATTGTTTAAGTGTGTC--------------------TGTGGCTATTTTGTAACTCGCTCCTT------------GTCTGGGGCTGTGTTTCTGGGAGGCATCCCTGGTGATTCGTGGTGGGCCTCTCTACTCCTTTTGGGCATGCCATGAACACTTCCTCTGCATCGACTTACCCACTTCCTTGCTGATG----TACACTAT--GTCACCGTTCCTTCCATTTACTGGTATAAGAAT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72069940 574 - 125710982 TAAAACTGATCATTATCCACATACATCCATACAGTCTTTTACACAG--------------CATTGCCTAACCTGGTGACTAGCAGCTCTGT--TGTTTAAAACT-----GGAGGGTTTGGTGGTCACATTCACCACCTTGGAAC-CCCATGTGGTTCTGAGTGAAGGCTCCGAGGAGGAGTCAGG----GGACAAAGAACTCCTTTTGAGAGGAGTTtacataaacaaatcctttctgtaacaaatccgaa---cctcatggataaggccagcaactcctctctgataccccttccccaacccc----agt--ccccaccggcccccttgaaggtaaccactattatgagctggaagtatagcc----------tAG---TTCTCATAAACTGA-CTTTTATATGCTAAAGGAAACCTGAAATATACATTGCTTAAGTGTGTC--------------------TGTGGATATTTTGTAACTCGCTCCTT------------GTCTGGGGCTGTGTTTCTGGGAGGCATCCCTGGTGATTCGTGGTGGGCCTCTCTA---CTTTTGGGCATGCCATGAACACTTCCTCTGCATTGACTTATCCACTTCCTTGCTGATG----TACACTAT--GTCACCGTTCCCTCCATTTACTGGTATAAGAAT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75527462 616 - 121768101 --aaaCCGATCATTATCCACATACATGTACACAGCCTTTTACACAGCATTTCCCAAGCATCATTTCCTGACCTGGTGACCAGCAGCTCTGT--TGTTTAAAACTG--AGAGAGGGTTTGGTGGTCATATTCACTGCCTTGGAAC-CCCATGTGGTTCTGAGTGAAGGCTCCGAGGAGGAGTCATGCACAGGGCAAAGAACTTCCTCTGAGAGGGGTTTACATAAACAAACCCTCTCTGTAACAAATCCAAACCTCCTCATGGATAAGGCCAGC-ATTCCTCTCTGATACCCCTTCCCCAACCCC----AGT--CCTCACTGGCCTCCTCGAAGGTAACCACTCTTACGAGCTAGAAGTATATCC----------TAGTTATTCTTACAAACTTA-TTTTTATGCACTAAAGAAAATCTTGAAAATACATTGTTACAGTGTGCC--------------------TGTGGATATTTTGTGACTCGCTCCTTCCTTCGTCGTCCATCCGGG--TGTGTTTCTGGGAGGCATCCCTGGTGATCTCTGGTAAGCCTCTCTACTTTTTGTGAACATCCCATGAA-GCTTAGTCTGCATCGACTTACCCACCTCCCTGCTGATGAACAGACACTACATGTCACCGTTCCCTCTGTTTACTGGTATAAGAAT i calJac3.chr12 C 0 C 0 s canFam3.chr4 27694789 608 + 88276631 TAGGACTGATGACGACCCACATACACCTACACGACCTTCTATGCAG--------------CGTTTCTCAACCTGGTGGCCAGCTGATCTGTTCTGGTCTGGTCTGCAGGGAAGGGTTTGGTGGCCACCTCTACCATCCAGAAACTCCTGTGTATTTCTGATTAAAGCCTCT---GAGGAGTCTCA----GGGCCAAGGACTTCCTCCAGGAGAAATt-----ggacacatcctctctcttaaaaatc-gaa---tgttacagggaaagtcaaa-cggcttctctgacgcctcttctccaagccctcctggtccccccaccagcctcctc----atcaccactattaggacctggaagtatatcctttcagatatttgctattctcacatgttgattttttatatactccaaaaagactacaaagtatgctttgtgcatgtgttcaacaaaaacgacctaataatgtaaaca---tgtgtccctcctctc------------actccatgttatgtttctggaacgcatccctgttgattcatacagctctcctgtattctttctgaACCTCGCACACATGGATACGTTGCTTCTCTTCATCCATTTCCCTCTGCGTG----GACAGTAA--GTCACTATGCCTTTGACTTACTGGAGCAAGAAT i canFam3.chr4 I 48 C 0 e mm10.chr14 24139753 4475 + 124902244 I a score=617204.000000 s hg38.chr10_KI270825v1_alt 37480 217 + 188315 CATATTCTCaaattatggcacagttgctatagggtggaattcaatatagtgcttaaaagaatggtttggaagaatattactgagatgggaagatgctaacaatatgatagtggaaatacctggat-----------------------------------------------------------------------gaaaacagtgtaatgcagtgtaatcccagctttgttgtattaagtaaaAAACTGGTAAGAAATACATTAAAATGTTAATGGTT-AAAAAAAAC s panTro4.chr10 76408073 217 + 133524379 CATATTCCCaaattatggcacagtcgctgtagggtggaattcaatatagtgcttaaaagaatggtttggaagaatattactgagatgggaagatgctaacaatatgatagtggaaatacctggat-----------------------------------------------------------------------gaaaacagtgtaatgcagtgtaatcccagctttgttgtattaagtaaaAAACTGGTAAGAAATACATTAAAATGTTAATCGTT-AAAAAAAAC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76076118 217 - 133410057 CATATTCTCaaattatggcacagtcgctgtagggtggaattcaatatagtgcttaaaagaatggtttggaagaatattactgagatgggaagatgctaacaatatgatagtggaaatacctggat-----------------------------------------------------------------------gaaaacagtataatgcagtgtaatcccagttttgttgtattaagtaaaaaactggtaagaaatacattaaaatgttaatggtt-aAAAAAAAC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35019178 218 + 104879549 CATATTCTCaaattatggcacagtcgctgtagggcggaattcaatatagggcttaaaagaatggtttggaagaatattactgagatgggaagatgctaacaatatgatagtggaaatatctggat-----------------------------------------------------------------------gaaaacagtataatgcagtgtaatcccagttttgttgtattaagtaaaaaactgataagaaatacattaaaatgttaatggttaAAAAAAAAA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73812173 213 - 130959383 CATATTCTCaaattatggcacagtcgctgtagggtggaattcaatatagtgcttaaaagaatggtttggaagaatattactgatatggg-agatgctaacaatatgatagtggaattatctggat-----------------------------------------------------------------------gaaaatggcataatgcagtgtaatctcagttttgttgtat--aagaaaAAACTGGAAAGAAATACATTAAAATGTTAATGGTT--AAAAAAAT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75374075 215 - 133195287 CATATTCTCaaattatggcacagtcgctgtagggtggaattcaatatagtgcttaaaagaatggtttggaagaatattactgatatggg-agatgctaacaatatgatagtggaattatctggat-----------------------------------------------------------------------gaaaatggcataatgcagtgtaatctcagttttgttgtattaagtaaaaaactggaaagaaatacattaaaatgttaatggtt--aAAAAAAT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73238776 216 - 125196307 CATATTCTCAAATTATGGCACAGTCACTGTAGGGTGGAATTCAATATAGTGCTTAAAAGAATGGTTTGGAAGAATATTACTGATATGGGAAGATGCTAACAATATGACAGTGGAATTATCTGGAT-----------------------------------------------------------------------GAAAATGGTATAATGCAGTGTGATCCCAGTTTTGTTGTATTAAGTAAAAAACCggaaagaaatacattaaaatgttaatggtt--aaaaaaat i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72070514 216 - 125710982 CATATTCTCaaattatggcacagtcgctgtagggcggaattcaatatagtgcttaaaagaatggtttggaagaatattactgatatgggaagatgctaacaatatgatagtggaaatagctggat-----------------------------------------------------------------------gaaaatggtataatgcagtgtaatcccagttttgttgtattaagtaaaaaactggaaagaaatacattaaaatgttaatggtt--aAAAAAAT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75528078 286 - 121768101 TATATTCTCaaattatggcacagtcactctagggtggaattcaatatagtgcttaaaataatggtttggaagaatattact-agatgggaagatgctaacactatgacagtggaaatatctggataaaaactgtataacctatttcacctgattttgctaagaataaaaaattttaaaaatttttaaaaattaaaaaaaaactgtataatgaagtataatcccagttttgttgtattaagtaaaaaactggaaggaaatacattaaaatgctaatggtT--TTAAAAAT i calJac3.chr12 C 0 C 0 e canFam3.chr4 27695397 0 + 88276631 C e mm10.chr14 24139753 4475 + 124902244 I a score=601673.000000 s hg38.chr10_KI270825v1_alt 37697 170 + 188315 CATATTCTCCCTTAATGATTACTAACATTCCACACTATGGGGTACCAATTTAGGAGATTCTTTTTCCTCCCT-GACAATCTTCTTTGTCAGATGTCCTCACAATTACAGAATTGTAAGACTAGACAGCATCTTATGAGTCACTGACTCCAACTGGAGAAGA---AAAACAGCCT s panTro4.chr10 76408290 170 + 133524379 CATATTCTCCCTTAATGATTACTAACATTCCACACTGTGGGGTACCAATTTAGGAGATTCTTTTTCCTCCCT-GACAATCTTCTTTGTCAGATGTCCTCACAATTACAGAATTGTAAGACTAGACAGCATCTTATGAGTCACTGACTCCAACTGGAGAAGA---AAAACAGCCT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76076335 170 - 133410057 CATATTCTCCCTTAATGACTATTAACATTCCACACTGTGGGGTACCAATTTAGGAGATTCCTGTTCCTCCCT-GACAATCTTCTTTGTCAGATGTCCTCATAATTACAGAATTGTAAGACTAGACAGCATCTTATGAGTCACTGACTCCAACTGGAGAAGA---AAAACAGCCT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35019396 170 + 104879549 CATATTCTCCCTTAATGACTATTAACATTCCACACTGTGGGGTACCAATTTAGGAGATTCCTGTTCTTCCCT-GACAATCTTCTTTGTCAGATGTCCTCACAATTACAGAATTGTAAGACCAGACAGCATCTTATGAGTCACTGACTCCAACTGGAGAAGA---AAAACAGCCT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73812386 170 - 130959383 CATATTCTCCCTTACTGACTATTAACATTCCACATTGTGGGGTACCAATTTAGGAGATTCCCGTTCCTCCCT-GACAATCTTGTTTGTCAGAGGTCCTCACAATTACAGAATCGTAAGACTAGACAGCATCTTATGAGTCACTGACTCCAACTGGAGAAGA---AAACCAGCCT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75374290 170 - 133195287 CATATTCTCCCTTACTGACTATTAACATTCCACATTGTGGGGTACCAATTTAGGAGATTCCCGTTCCTCCCT-GACAATCTTGTTTGTCAGAGGTCCTCACAATTACAGAATCGTAAGACTAGACAGCATCTTATGAGTCACTGACTCCAACTGGAGAAGA---AAACCAGCCT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73238992 166 - 125196307 catattctcCCTT----ACTATTAACATTCCACACTGTGGGGTACCAATTTAGGAGATTCCTGCTCCTCCCT-GACAATCTTGTTTGTCAGAGGTCCTCACAATTACAGAATCGTAAGACTAGACAGCATCTTATGAGTCACTGACTCCAACTGGAGAAGA---AAATCAGCCT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72070730 170 - 125710982 CATATTCTCCCTTACTGACTATTAACATTCTACATTGTGGGGTACCAATTTAGGAGATTCCTGTTCTTCCCT-GACAATCTTCTTTGTCAGAAGTCCTCACAATTACAGAATCGTAAGACTAGACAGCATCTTATGAGTCACTGACTCCAACTGGAGAAGA---AAACCAGCCT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75528364 169 - 121768101 CATATTCTCCCTTAATGACTATTAACATTTCACACAGTGGGGTACCAAGTTAGGAGATTCCTGTTCCTCCCT-GACTATCTTCTTTGTCAGAGGTCCTCACAATTGCAGAATCGTAAGACTAGACAGCATCTTTTGAGTCACTGACTCCAACTGGAGAAGA---AAAACA-CCT i calJac3.chr12 C 0 C 0 s canFam3.chr4 27695397 174 + 88276631 CGTATTCTCCTCTAACGACTATTAACATTCCACGCAGTGGGATACCAATTTAGAAGATTCCCGTTCCTCCCTCAACAATCTGCTTCATTGGAAGTCCTCATAATTACAGAATTAGAGAGCTACAGAGCATCTCACAAGTCATTAAATCCAACCAGCAAAAATACAAAACTCCCT i canFam3.chr4 C 0 I 3210 e mm10.chr14 24139753 4475 + 124902244 I a score=3902408.000000 s hg38.chr10_KI270825v1_alt 37867 1299 + 188315 ATCCAAGGTCACAGCTAATCAGGGCAGAGCAAAGGCATGGTCCTGGGGGTTCCAACCTTAGACCATACGGCAATGGCTTTCTTTAAAAGGtgctgtggactgaactatgtcccctcgacatttatatgttgaagccctaagccccagtgtgactacctttggagacggagtcttcaggaggt-----aagttaaatgaggtcagaagagcaaggccctaatctgatagaactgcggctttttaagaggaagagacaccagaga----tctctctgtctccaacatgtgaggacacagcaaggaggcagctgcgtacaaggcaggatgacagccctcaccagaaccaaccacactggcacccagatctcggatttccaacctcaagaactgtgagaaaatgaattcttgttatttaagtcacctagtctgtggtattggttttttggtttgtt-----------tttgtttttgagatatgctcttgctttgttgccaggctgaagtggagtggcacaatcatagctcatcgcagcactgtactcctgggcttaggtgatcctccagcctcagcctcctgagtagccgggactacaggcacacgccaccacacttgattagttttttaaagtttttgtagagatgggagtcttgccatgttgcccaggctggtctcaaactcctggcc-tcaagcgatcctcttgcctcagcttcccaaagtgctgggattacaggtgtgagctaccgtgcctggcctgtggtatttggttacagcagccctagcagactaa-CATAAGAGGAAAACCAGTCCTCCATATATTCCTGAGACACTCCCGCACAAGCCCCTAAAAGAGCAAGCATAAAGACAtgcagtgtcctctgggtggtggagagttgagtccactt---agaccattgcaggtgggtgcacaatcagcagggt---ggggggtaccagggatgctatgcagcagttggaagcaataaactaaaGcaggaattcaaaacccactgtgcattagaattagctggggtaacttttaaaCTACTACACAGggattaccactcccaggtataatggaacagcttgcagcatcccttggagaacacctagaaaatctgggtaaaaaatgagaaatatctttttgaaggcatcgtagagtggcagagacaagacagaatttgagatgccaagatcctggagagaaggaaactggagtattagaagctgacattctgcaggcctttcccccttcagagcaactggagacttctaaagtgagagtgaggggcagagaacccaggcagagggccgccgctgagggg s panTro4.chr10 76408460 1299 + 133524379 ATCCAAGGTCACAGCTAATCAGGGCAGAGCAAAGGCATGGTCCTGGGGGTTCCAACCTTAGACCATACTGCAATGGCTTTCTTTAAAAGGtgctgtggactgaactatgtcccctcgacatttatatgttgaagccctaagccccagtgtgactccccttggagacagagtcttcaggaggt-----aagttaaatgaggtcagaagagcaaggccctaatctgatagaactgcggctttttaagaggaagagacaccagaga----tctctctgtctccaacatgtgagaacacagcaaggaggcagctgcgtacaaggcaggatgacagccctcaccagaaccaaccacactggcacccagatctcggatttccaacctcaagaactgtgagaaaatgaattcttgttatttaagtcacctagtctgtggtattggttttttggtttgtt-----------tttgtttttgagaaatgctcttgctttgttgccaggctgaagtggagtggcacaatcatagctcattgcagcactgaactcctgggcttaggtgatcctccagcctcagcctcctgagtagccgggactacaggcacacgccaccacacttgattagttttttaaagtttttgtagagatgggagtcttgccatgttgcccaggctggtctcaaactcctggcc-tcaagcgatcctcttgcctcagcttcccaaagtgctgggattacaggtgtgagctaccgtgcctggcctgtggtatttggttacagcagccctagcagactaa-gataAGAGGAAAACCAGTCCTCCATATATTCCTGAGACACTCCTGCACAAGCCCCTAAAAGAGCAAGCATAAAGACATACAGTGTCCTCTGGGTGGTGGAGAGTTGAGTCCACTT---AGACCATTGCAGGTGGGTGCACTATCAGCAGGGT---GGGGGGTACCAGGGATGCTATGCAGCAGTTGGAAGCAATAAACTAAAGcaggaattcaaaacccactgtgcattagaattagctggggtaacttttaaaCTACTACACAGggattaccactcccaggtataatggaacagcttgcagcatcccttggagaacacctagaaaatctgggtaaaaaatgagaaatatctttttgaaggcatcgtagagtggcagagacaagacaggatttgagatgccaagatcctggagagaaggaaactggagtattagaagctgacattctgcaggcctttcccccttcagagcaactggagacttctaaagtgagagtgaggggcagagaacccaggcacagggccgctgctgagggg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76076505 1301 - 133410057 ATCCAAGGTCACAGCTAATCAGGGCAGAGCAAAGGCATGGTCTTGGGGGTTCCAACCTTAGACCATACTGCAATGGCTTTCTTTAAAAGGtgctgtggactgaactatgtcccctcaacatttatatgttgaagccctaagccccaatgtgactacatttggagacggagccttcaggaggt-----aagttaaatgaggtcagaagagcaaggccctaatctgatagaactgtggctttttaagaggaagagacatcagaga----tctctctgtctccaacatgtgaggacacagcaaggaggcagccgcgtacaaggcaggatgacagccctcaccagaaccaaccacactggcacccaggtcttggatttccaacctcaagaactgtgagaaaatgaattcttgttatataagtcacctagtctgtggtattggttttttggtttgtt-----------tttgtttttgagatatgctcttgctttgttgccaggctgaagaggagtggcacaatcatagctcattgcagcactgaactcctgggcttaggtgat-ctccagcctcagcctcctgagtagctgggactacaggcacacgccaccacacttgattagttttttaaagtttttgtagagatgggagtcttgccatgttgcccaggctggtctcaaactcctggcc-tcaagcgatcctcttgcctcagcctcccaaagtgctgggattacaggtgtgagctaccatgcccggcctgtggtatttggttacggcggccctagcagactaa-gataAAAGGAAAACCAGTCCTCCatatattcctgagacactcctgcacaagcccctaaaggagcaagcataaagacatgcagtgtcctctgggtgggggacagttgagtccacttaggagaccattgcaggtgggtgcataatcagcagggt---ggggagtaccagggatgctatgcagtagttggaagcaataaactaaaGcaggaattcaaaacccactgtgcattagaattagctggggtaacttttaaaCTACTACACAGggattaccactcccaggtataatggaacagcttgcagcatcccttggagaacaactagaaaatctgggtaaaaaatgagaaatatctttttgaaggcatcgtagagtggcagagacaagacaggatttgagatgccaagatcctggagagaaggaaaccggagtattagaagctgacattctgcaggcctttcccccttcagagcaactggagacttctaaagtgagagtgaagggcagagaacccaggcagagggccactgctgagggg i ponAbe2.chr10 C 0 I 132 s nomLeu3.chr18 35019566 1297 + 104879549 ATCCAAGGTCACGGCTAATCAGAACACAGCAAAGGCATGGTCTTGGGGGTTCCAACCTTAGACCATACTGCAATGACTTTCTTTAAAAGGtgctgtggactgaactgtgtcccctcaacatttatatgttgaagccctaagccccaatgtaactacatttggagacggagtcttcaggaggt-----aagttaaatgaggtcagaagtgcaaggccctaatctgatagaactgtggctttttaagaggaagagacaccagaga------tctctgtctccaacatgtgaggacacagcaaggaggcaaccgcgtacaaggcaggatgacagccctcaccagaaccaaccacactggcacccagctctcagatttccaacctcaagaactgtgagaaaatgaa---ttgttatttaagtcacctagtcggtggtattggttttttggtttgtt-----------tttgtttttgagatatgctcttgctttgttgccaggctgaagtggagtggcacaatcatagctcactgcagcactgaactcctgggcttaggtgatcctccagcctcagcctcctgagtagctgggactacaggcacacgccaccacacttgattagttttttaaagtttttgtagagatgggagtcttgccatgttgcccaggctggtctcaaactcctggccttcaagcgatcctcttgcctcagcctcccaaagtgctgggattacaggtgtgagctaccgtgcccggcctgtggtatttggttacagcagccctagcagactaa-gataAAAGGAAAACCAGTCCTCCATATATTCCTGAGACACTCCCACACAAGCCCCTAAAGGAGCAAGCATAAAGACATGCAGTGTCCTCTGGGTGGTGGAGAGTTGAGTCCACTTAGAAGACCATTGCAGGTGGGTGCACAATCAGCAGGGT---GGGGGGTACCAGGGATGCTATGCAACAGTTGGAAGCAACAAACTAAAGcaggaattcaaaacccactgtgcattagaattacctgggataacttttaaaCTACTACACAGggattaccactcccaggtataatggaacagtttgcagcatcccttggagaacaactagaaaatctgggtaaaaaatgagaaatatctttttgaaggcatcgtagagtggcagagacaagacaggatttgagatgccaagatcctggagagaaggaaactggggtattagaagctgacattctacaggcctttcccccttcagagcaactggagacttctaaagtgagagtgaggggcagagaacccaggcagagggccgctgataagga- i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73812556 1300 - 130959383 ATCCAAGGTTACAGCTGATCAAGGCACAGCAAAGGCATGGTCTTGGGGGTTCCAACCTTAGACCATACTGCAATGGCTTTCTTTAAAAGGtgctgtggactgaactgtgtcccctcaacatttatatgctgaagccctaagtcccaaagtgactacatttggaggcggagtcttcaggaggt-----aagttaaatgaggtcagaatagtagggccctaatctgatggaactgtggctttttaagaggaagagacaccagagatcaatctctctgtctccaacatgtgaggacacagcaaggaggcagccgcatacaaggcaggatgagaaccctcaccagaaccaaccacactggcacccaggtctcggatttccaacctcaagaactgggagaaaatgaattcttgtgatttaagtcacctagtctgtggtattggttttttgggtttttttgtttg----tttgtttttgagatatgctctt-------------gctgaagtgg-gtggcacaatcatagctcattgcagcactgaactcctgggcttaggtcatcctccagccccagcctcctaagcagctgggactacaggcacacgccaccacgcttgattagttttttaaagtttttgtagagatgggagtcttgccatgttgcccaggctggtctcgaactcctgggc-tcaaacaatcctctcgcctcagcctcccaaagtgctgggattacaggtgtgagccatcgtgcctggcctgtggtatttggttatggcagccctagcagactaa-gataAAAGGAAAACCAGTCCTCCATATATTCCTGAGACACTCCCGCACAAGCCCCTAAAGGGGCAAGCATAAAGACATGCAGTGTCCTCTGGGCGGTGGAGAGTTGAGTCCACTTAGGAGACCATTGTGGGTGGGTGCACAATCAGCAGGGTTATGGGATGTACCAGGGATGCTATGTGGCAGCTGGAAGCAATAAACTAAAGcaggaattcaaaacccactgtgcattagaattacctggggtaacttttaaaCTACTACATAGGTattgctactcccaggtataatggaacagcttgcatcatcccttggagaacaactagaaaatctgggtaaaaaatgagaaatatctttttgaaggcatcgtagagtggcagagacaa-acaggatctgagatgccaagatcctggagagaaggaaattggagtagtagaagctgacattctgcaggcctttcccccttcaaagcaactagagacttctaaagtgagagtgaggggcagagaacccaggcagagggccgctgctaaggg- i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75374460 1294 - 133195287 ATCCAAGGTTACAGCTGATCAAGGCACAGCAAAGGCATGGTCTTGGGGGTTCCAACCTTAGACCATACTGCAATGGCTTTCTTTAAAAGGtgctgtggactgaactgtgtcccctcaacatttatatgctgaagccctaagtcccaaagtgactacatttggaggcggagtcttcaggaggt-----aagttaaatgaggtcagaagagtagggccctaatctgatggaactgtggctttttaagaggaagagacaccagagatcaatctctctgtctccaacatgtgaggacacagcaaggaggcagccgcatacaaggcaggatgagaaccctcaccagaaccaaccacactggcacccaggtctcggatttccaacctcaagaactgggagaaaatgaattcttgtgatttaagtcacctagtctgtggtattggttttttgggtttttttgtttg----tttgtttttgagatatgctctt-------------gctgaagtgg-gtggcacaatcatagctcattgcagcactgaactcctgggcttaggtcatcctccagccccagcctcctaagcagctgggactacaggcacacgccaccacgcttgattagttttttaaagtttttgtagagatgggagtcttgccatgttgcccaggctggtctcgaactcctgggc-tcaaacaatcctctcgcctcagcctcccaaagtgctgggattacaggtgtgagccatcgtgcctggcctgtggtatttggttatggcagccctagcagactaa-gataAAAGGAAAACCAGTCCTCCATATATTCCTGAGACACTCCCGCACAAGCCCCTAAAGGGGCAAGCATAAAGACATGCAGTGTCCTCTGGGCGGTGGAGAGTTGAGTCCACTTAGGAGACCATTGTGGGTGGGTGCACAATCAGCAGAGTTATGGGATGTACCAGGGATGCTATGTGGCAGCTGGAAGCAATAAACTAAAGcaggaattcaaaacccactgtgcattagaattacctggggtaacttttaaaCTACTACATAGGTattactactcccaggtataatggaacagcttgcatcatcccttggagaacaactagaaaatctgggtaaaaaatgagaaatatctttttgaaggcatcgtagagtggcagagacaa-acaggatttgagatgccaagatcctggagagaaggaaattggagtagtagaagctgacattctgcaggcctttcccccttcagagcaactagagacttctaaagtgagagtgaggggcagagaacccaggcagagggccgctgc------- i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73239158 1311 - 125196307 ATCCAAGGTTACAGCTGATCAGGGCACAGCAAAGGCATGGTCTTGGGGGTTCCAACCTTAGACCATACTGCAATGGCTTTCTTTAAAAGGTGCTGtggactgaactgtgtcccctCAACATttatatgctgaagccctaagtCCCAAAGTGACTACATTTGGAGGCGGAGTCTTCAGGAGGT-----AAGTTAAATGAGGTCAGAAGAGTAGGGCCCTAATCTGATGGAACTGTGGCTTtttaagaggaagagacaccagagatcaATCTCTCTGTCTCcaacatgtgaggacacaacaagGAGGCAGCCGCATACAAGGCAAGatgagagccctcaccagaaccaaCCACACTGGCACCCAGGTCTCGGATTTCCAACCTCAAGAACTGGGAGAAAATGAATTCTTGTGATTTAAgtcacctagtctgtggtattggttttttgggtttttttttgtt----gttgtttctgagatatgctcttgctttgttgccaggctgaagtgg-gtggcacaatcatagctcattgcagcactgaactcctgggcttaggtcatcctccagccccagcctcctgagcagctgggactacaggcacatgccaccacgcttgattagttttttaaagtttttgtagagatgggagtcttgccatgttgcccaggctggtctcgaactcctggcc-tcaaacaatcctcttgcctcagcctcccaaagtgctgggattacaggtgtgagccatcgtgcctggcctgtggtatttggttatggcagccctagcagactaa-aataaaaggaaaaccagTCCTCCATATATTCCTGAGACACTCCCGCACAAGCCCCTAAAGGGGCAAGCATAAAGACATGCAGTGTCCTCTGGGTGGTGGAGAGTTGAGTCCACTTAGGAGACCATTGTGGGTGGGTGCACAATCAGCGGGGT--gggggggTACCAGGGATGCTATGTGGCAGCTGGAAGCAATAAACTAAAGCAGGAATTCAAAACCCACTGTGCATTAGAATTACCTGGGGTAACTTTTAAACTACTACATAGGTATTACTATTCCCAGGTATAATGGAACAGCTTGCATCATCCCTTGGAGAACAACTAGAAAATCTGggtaaaaaatgagaaatatcttTTTGAAGGCATCGTAGAGTGGCAGAGACAA-ACAGGATTTGAGATGCCAAGATCCTGGAGAGAAGGAAATTGGAGTAGTAGAAGCTGACATTCTGCAGGCCTTTCCCCCTTCAGAGCAACTAGAGACTTCTAAAGTGAGAGTGAGGGGCAGAGAACCCAGGCAGAGGGCCGCTGCTGAGGG- i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72070900 1314 - 125710982 CTCCAAGGTTACAGCTGATCAGGGCACAGCAAAGGCATGGTCTTGGGGGTTCCAACCTTAGACTATACTGCAATGGCTTTCTTTAAAACCtgctgtggactgaactttgtcccctcaacatttatatgctgaagccctaagtcccaaagtgactacatttggaggcggagtcttcaggaggt-----aagttaaatgaggtcagaagagtagggccctaatctgatggaactgtggctttttaagaggaagacacatcagagatcaatctctctgtctccaacatgtgaggacacagcaagaaggcagccgcatacaaggcaggatgagagccctcaccagaaccaaccacactggcacccaggtctcggatttccaacctcgagaactgggagaaaatgaattcttgtgatttaagtcacctagtctgtggtatcggttttttgggtttgtttgtttgtttttttttttttgagatatgctcttgctttgttgccaggctgaagtgg-gtggcacaatcatagctcattgcagcactgaactcctgggcttaggtcatcctccagccccagcctcctgagcagctgggactacaggcacacgccaccacacttgattagttttttaaagtttttgtagagatgggagtcttgccatgttgcccaggctggtcttgaactcctggcc-tcaaacaatcctcttgcctcagcctcccaaagtgctgggattacaggtgtgagccatcgtgcccggcctgtggtatttggttatggcagccctagcagactaa-gataAAAGGAAAACCAGTCCTCCATATATTCCTGAGACACTCCCGCACAAGCTCCTAAAGGGGTAAGCATAAAGACATTCAGTGTCCTCTGGGTGGTGGAGAGTTGAGTCCACTTAGGAGAGCATTGTGGGTGGGTGCACAATCAGCGGGGT---GAGGGGTACCAGGGATGCTATGTGGCAGCTGGAAGCAATAAACTAAAGcaggaattcaaaacccactgtgcattagaattacctggggtaacttttaaaCTACTACATAGGTattactattcccaggtataatggaacagcttgcatcatcccttggagaacaactagaaaatctgggtaaaaaataagaaatatctttttgaaggcatcgcagagtggcagagacag-acaggatttgagatgccaagatcctggagagaaggaaattggagtagtagaagctgacattctgcaggcctttcccccttcagagcaactagagacttctaaagtgagagtgaggggcagagaacccaggcagagggccgcagctgaggg- i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75528533 1297 - 121768101 ATCCAAGGTCACAGCTCATCAGGACAGAGCAAAGGGATGGTCTTGGGAGTTCCAACCTTAGACCATACTGCGATGGCGTTCCTTAAAAGGtgctgtggaccgaactgtgtcccctcaacagttacacgctgaagccctaacctccaatgggactacatttggagatgaagtcttcaggaggtaacgaaagctgaatgaggtcaaaagagcagggccctaatctgatagaactgtggctttctaagaggaagagacaccagagatctctccccct-tctccaacacatgaggacacagcaaagaggcagccatgaagaagccaagatgagagccctcaccagaaccaaccacactggcagccaggtcttggatttccaacctcgagaactgtgagaaaatgaattcttggtatttaagtcaccttgtctgtggtactgg-tttttggtttgtt-----------tctgtttttaagacacgttcttgctttgctgccaggctgaagtggagtgtcacaatcatagctcattgtagcaccaaactcctgggcttcggtgaccctccagcctcggcctcaggagtagctgggactacaggcacacaccaccatgcttgattag-----taaagtttttgtagagataggagtcttgccatgttaccca----ggtcttgaactcctggcc-tcaagcgatcctcttgcctcagcctcctaaagtgctgggattacagatgtgagccactgtgcccag-ctgtggcatctggttatggcagccctagcagactaaGGATAAAAGAAAAACCAGTCCTCCacatatttctgagacactcccgcacaagcccctaaagaaacaagcataaagacatgcactgtcctctgggtggtgtagagctgggtccacttaggagaccattacgggtaggtgcatgactgg-ggggt---ggcaggtaccagggatgctatgcagcagttggaagcaataaactaaaGcaggaattcaaaacccactgtgcattagaattacttggggtaacttttaaaCTATTACACAGggattattactcccaggtataatggaacagcttgcagtatcccttggagaacaactagaaaatctgggtgaaaaatgagaaatacatttttgaaggcaccatagagtggcagagacag-ccagaatttgagatgccaagatcctggagagaaggaaaccagagtagtagaagctgacattctgcaggccattcccccttcagagcaagcagagacttcaagagtgagagtgagaggcagagaacccaggcagagggccgttgataagga- i calJac3.chr12 C 0 C 0 e canFam3.chr4 27695571 3210 + 88276631 I e mm10.chr14 24139753 4475 + 124902244 I a score=121058.000000 s hg38.chr10_KI270825v1_alt 39166 97 + 188315 ctgagaacccagGCACGGGGCCGCCGCTGAGGGGCTGAGAACCCAGGCACGGGGCCGCCGCTGAGGGGCTGAGAACCCAGGCACGGGgccgccgctg s panTro4.chr10 76409759 95 + 133524379 ctgagaacccaggcactgggccgctgctgaggg-ctgagaacccaggcacagggccgctgctgaggg-ctgagaacccaggcacagggccgctgctg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76077938 92 - 133410057 ctgagaacccaggcacagggccgctgctgaggg-ctgagaacccaggcacagggctgctgctgaggg-ctgagaacccaggcacagggcc---gcta i ponAbe2.chr10 I 132 C 0 s nomLeu3.chr18 35020863 95 + 104879549 ctgagaatccagGCACAGGGCCGCTACTGAGGG-CTGAGCACCCAGGCACAGGGCCGCTGCTGAGGG-CTGAGAACCCAGGCACAGGGCCGCTGCTG i nomLeu3.chr18 C 0 I 162 s rheMac3.chr9 73813856 62 - 130959383 ctgagaacaca----------------------------------ggcagagggccgctgttgaggg-ctgagaacccgggcagagggccgctaagg i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75375754 35 - 133195287 -------------------------------------------------------------tgaggg-ctgagaacccgggcagagGGCCGCTAAGG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73240469 95 - 125196307 CTGAGAACCCAGGCAGAGGGCCGCTGCTGAGGG-CTGAGAACCCGGGCAGAGGGCCGCTGCTGAGGG-CTGAGAACCCGGGCAGAGGGCCGCTAAGG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72072214 95 - 125710982 ctgagaacccaggcagagGGCCGCTgctgaggg-ctgagaacccaggcagagggccgctgctgaggg-ctgagAAcccaggcagagggccgctgctg i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75529830 31 - 121768101 ----------------------------caggg------aactcgggcacaaggccgctgataag-------------------------------- i calJac3.chr12 C 0 C 0 e canFam3.chr4 27695571 3210 + 88276631 I e mm10.chr14 24139753 4475 + 124902244 I a score=323.000000 s hg38.chr10_KI270825v1_alt 39263 4 + 188315 aggg s panTro4.chr10 76409854 4 + 133524379 aggg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76078030 4 - 133410057 agga i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35021120 4 + 104879549 AGGA i nomLeu3.chr18 I 162 C 0 s rheMac3.chr9 73813918 1 - 130959383 ---a i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75375789 1 - 133195287 ---A i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73240564 1 - 125196307 ---A i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72072309 1 - 125710982 ---a i chlSab2.chr9 C 0 I 132 s calJac3.chr12 75529861 2 - 121768101 --ga i calJac3.chr12 C 0 C 0 e canFam3.chr4 27695571 3210 + 88276631 I e mm10.chr14 24139753 4475 + 124902244 I a score=4270273.000000 s hg38.chr10_KI270825v1_alt 39267 1440 + 188315 ctgagaaccca------------------------------cgaaaagtttctgaaaatctccaaagcaggtgagatcaaaacggagttcagggctgccaggacctggtgggtcattattccagaggaagggaagggcaaagaactaagtctggtatcacaggttttcccttaaagccatttgccaaattcttaagctgtgaaaagcaagaagctaagcatctaag--acagtcactaagacactgagc-------agtgttccatggcctcccagtgctgaagagtgagaaactggaagtcaaggctccctagggaagagcggccctagggaacaccccaggctgggaccactggtgggccaccccctagggtcag-gtgaaccaccagctgcacaaaagctgcaacccagcctgaggtcagctgagtctgtggctggatcaaagtgatctgcgagcagcggctatctccagagcagagggcagaccctctctggaagctggcaacatcactcggagccctgaaaatcccctaaacataacttctgacatctcaataaacaataactaggcatat-catggggcaggaccaagaaaaacaaagaccacagaaagagactcagggatgaccacacatgacagttaccaaacgcagtctttacaaacatatgattcaagtatttaagaggacagatgacaagagggaaagtctcagcagagaattaaagcctggt----aaaaaagaaccaagtggaaactctagagtgataaataaaatacaacttctgaaagtaagaacataatggatgcaacagaagagtggaataatgaacaggaaaaaa---gagtagaaaacaaccaggctggctgaatcatggagagaaagaaagaagtggaaaatgcaggagaaaaagagcccagaagacaggagacagacagggtat-------------tgtcgaagaacaaaaaccccgaggagaggcaaggtcagcacagaagca-----atatgaaagaaactgcggccaggaatctccaaaaccgaccacaccaccaaactacagatgtaaaaagtgctaagcaccttctgagcaggataaacacaaagaaaaccacacgggggaagcacggtgtggtaagaaattaagaagtttctttctgagaaaggaaggcagagaaaaccctacccactcatggtggtggacgggtggtggcactgccttcagcactgagcctggaaagatgacttctcaccagcaatgagtgtggcaggctgacaagtgtcccccaaagactgactcatgtcctaagccccagatcccatgagcattacaccttatgcaacaaaagaagcgatgattcagttaaaggccttgggaggaagggcttttcctggagtatctg----ggtgggtcctaaat-aaaaccccacgggtcctctgagaggcagagggagttgagagagagacccacgtggaggacgaggtgacgtgaagatggagcaga s panTro4.chr10 76409858 1470 + 133524379 ctgagaacccaggcacagggctgctaaggactgagaacccacgaaaagtttctgaaaatctccaaagcaggtgagatcaaaacggagttcagggctgccaggacctggtgggtcatgattccagaggaagggaagggcaaagaactaagtctggtatcacaggttttcccttaaagccatttgccaaattcttaagctgtgaaaagcaagaagctaagcatctaag--acagtcactaagacactgagc-------agtgttccatggcctcccagtgctgaagagtgagaaactggaagtcaaggctccctagggaagagcggccctagggaacaccccaggctgggaccactggtgggccaccccctagggtcag-gtgaaccaccagctgcacaaaagctgcaacccagcctgaggtcagctgagtctgtggctcgatcaaagtgatctgcgagcagcggctatctccagagcagagggcagaccctctctggaagctggcaacatcacccggagccctgaaaatcccctaaacataacttctgacatctcaataaacaataaccaggcatat-catggggcaggaccaagaaaaacaaagaccacagaaagagactcagggatgaccacacatgacagttaccaaacgcagtctttacaaacatatgattcaagtatttaagaggacagatgacaagaaggaaagtctcagcagagaattaaagcctgat----aaaaaagaaccaagtggaaactctagagtgataaataaaatacaacttctgaaagtaagaacataatggatgcaacagaagagtggaataatgaacaggaaaaaa---gagtagaaaacaaccaggctggctgaatcatggagagaaagaaagaagtggaaaatacaggagaaaaagagcccagaagacaggagacagacagggtat-------------tgtcgaagaacaaaaaccccgaggagaggcaaggtcagcacagaagca-----atatgaaagaaactgcggccaggaatctccaaaaccgaccacaccatcaaactacagatgtaaaaagtgctaagcaccttctgagcaggataaacacaaagaaaaccacacgggggaagcacggtatggtaagaaattaagaagtttctttctgagaaaggaaggcagagaaaaccctacccactcatggtggtggacgggtggtggcacggccttcagcactgagcctggaaagatgacttctcaccagcaatgagtgtggcaggctgacaagtgtcccccaaagactgactcatgtcctaagccccagatcccatgagcattacaccttatgcaacaaaagaagcgatgattcagttaaaggccttgggaggaagggcttttcctggagtatctg----ggtgggtcctaaat-aaaaccccacgggtcctctgagaggcagagggagttgagagagagacccacgtggaggacgaggtgacgtgaagatggagcaga i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76078034 1439 - 133410057 ctgagaaccca------------------------------cgaaaagtttctgaaaatctccaaagcaggtgagatcaaaacgtagttcacggctgccaggacctggtgggtcatgattccagaggaaggcaagggcaaagaactaagtctggtatcacaggttttcccttaaagccatttgccaaattcttaagctatgaaaagcaagaagctaagcatctaag--aaagtcactaagacactgagc-------agtgttccatggcctcccagtgctgaagagtgagaaactggaagtcaaggttccctagggaggagcggccctagggaacaccccaggctgggaccactggtgggccaccccctagggtcag-gtgaaccaccagctgcacaaaagctgcaacccagcctgaggtcagctgagtctgtggctggatcgaagtgatctgcgagcagcggctatctccagagcagagggcagaccctctctggaggctagcaacatcactcagagccccaaaaatcccctaaacataacttctgacatctcaataaacaataaccaggcatat-catggggcagaaccaagaaaaacaaagaccacagaaagagactcagggatgaccacacatgacagttaccaaacgcagtctttacaaacacacgattcaagtatttaagaggacagatgacaagagggaaagtctcagcagagaattaaagcctggt----aaaaaagaaccaggtggaaactttagagtgataaataaaatacaacttctgaaagtaagaacctaatggatgtaacagaagagtggaataatgaacaggaaaaaa---gagtagaaaacaaccaggctggctgaatcatggagagaaagaaagaagtggaaaatacaggagaaaaagagcccagaagacaggagacagacagggtat-------------cgtcaaagaacgaaaaccccaaggagaggcgaggtcagcacagaagca-----atgggaaagaaaccgcggccaggaatctccaaaaccgaccacaccaccaagctacagatgtaaaaagtgctaagaaccttctgagcaggataaacacaaagaaaaccacacaggggacgcatggtatggtaagaaattaagaagtttctttctgagaaaggaaggcagagaaaaccctacccacacatggtggtggacgggtggtggcactgccttcagcactgagcctggaaagatgacttctcaccagcaatgagtgtggcaggctgacaagtgttccccaaagactgactcatgtcctaagccccagatcccatgagcattacaccttattcaatgaaagaagcgatgattcagttaaaggccttgggaggaagggcttttcctggagtatctg----ggtgggtcctaaat-aaaaccccacgggt-ctctgagaggcagagggagttgagagagagacccacgtggaggacgaggtgacgtgaagacggagcaga i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35021124 1431 + 104879549 CTGAGAACCCA------------------------------CGAAAAGTTTCTGAAAATCTCCAAAGCAGGTGAGATCAAAACGGAGTTcagggctgccaggacctggtgggtcatgagtccagaagaagggaaaggcaaagaactaagtctgatatcacaggttttcccttaatgccatttgccaaattcttaagctgtgaaaagcaagaagctaagcatctaag--aaagtcactaagacactgagc-------agtgttccatggcctcccagtgctgaagagtgagaaactggaagtcaaggctccctagggaggagcggccctagggaacaccccaggatgggaccactggtgggccaccccctagggtcag-gttaaccaccagctgcacaaaagctgcaacccagcctgaggtcagctgagtctgtggctggatcgaggtgatctgcgagcagcggctatctccagagcagagggcagaccctctctggaggctggcaacatcactcagagccccgaaaatcccctaaacataacttctgacatctcaataaacaataaccaggcatat-catgggacaagaccaag-aaaacaaagaccacagaaagagactcagggatgaccacacatgacagttaccaaactcagtctttacaaacatatgattcaagtatttaagaggacagatgacaagagggaaagtctcagcagagaattaaagcctggt----aaaaaagaatcaagtggaaactctagaatgataaataaaatacaatttctgaaagtaagaacataatggatgaaacagaagagtggaataatgaacaggaaaaaa---gagtagaaaacacccagtctggctgaatcatggagaga-------------tgaatacaggggaaaaagagctcagaagacaggagacagacagggtat-------------cgttgaagaacgaaaaccccgaggagaggcgaggtcagcacagaagcaatatgatatgaaagaaactgcggccaggaatctccaaaaccgaccacaccaccaagctacagatgtaaaaagtgctaagaaccttctgagcaggataaacacaaagaaaaccacacgcggaaagcatggtatggtaagaaattaagaagtttctttctgagaaaggaaggcagagaaaaccctacccacacatggtggtggacgggtggtggcactgccttcagcactgagcctggaaagatgacttctcaccagcaatgagtgtggcaggctgacaagtgtcccccaaagactgactcatgtcctaagccccagatcccatgagcattacaccttatgcaacaaaagaagcgatgattcagttaaaggccttgggaggaagggcttttcctggagtatctg----ggtgggtcctaaat-aaaaccccatgggtcctctgagaggcagagggagttgagagagagacccacgtggaggatgaggtgacgtgaagacggagcaga i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73813919 1453 - 130959383 ctgagaaccca------------------------------caaaaagttcctgaaaatctccaaagcaggtgagatcgaaacggagttcagggctgccacgacctgatgggtcatgattccagaggaagggaagggcaaagaactaagtctgatatcagaggttttcccttaaaactatttgccaaattcttaagctgtgaaaagcaagaagctaagcatctaag--aaagtcactgagacactgagcagagtagagtgttccatggcctcccagtgctgaagagtgagaaactggaagtcaaggctccctagtgaggagcggcactaaggaacaccccaggctgggaccaccggtgggccgccccctagggtcagggtgaaccaccagctgcacaaaagctgcaacccatcctgaggtcagctgagcctgtggctggatcgaggtgatctgcgagcagcggctatctccagagcagagggcagaccctctctggaggccagcaacatcactcagagccccgaaaatcccctaaacataacttctgacatctcaataaacaataaccaggcatat-catggggcaggaccaagaaaaacaaagaccacagaaagagactcagggatgaccacacatgacagttaccaaacgcggtctttaaaaacatatgactaaagtatttaagaggacagatgacaagagggaaagtctcagcagagaattaaagcctggt----aaaaaagaaccaagtagaaactctagagtgataaataaaatacaatttctgaaagtaagaacataatggatgcaacagaagagtggaataataaacatgaaaaaaggtgactaaaaaacaaccaggctggctgaatcatggagagaaagaaagaagtggaaaatacaggagaaaaagagcccagaagataggacacagacatggtat-------------ggtcgaagactgaaaaccccgaggagaggcaaggtcagcacagaagca-----gtatgaaagaaactgcagccaggaatctccaaaaccgaccacaccaccaagctatagatgtaaaaagcgctaagaaccttctgagcaggataaacacaaagaaaaccacacagtggaagcatggtatggtaagaaattaagaaatttctttctgagaaagaaaggcagagaaaaccctacccacccatggtggtggacgggtggtggcactgccttcggcactgagcctgcaaggatgacttctcacctgcaatgagcatggcaggctgacaagtgtcccccaaagactgattcacgtcctaagccccagatcccatgagcatt--accttatgcaacaaaagaagcaatgattcagttaaaggccttgggaggaggggcttttcctggagtatctgggtaggtgggtcctaaat-aaaaccccatgggtcctctgagaggcagagggagttgacagacagacccacatggaacaggaggtgacgtgaagacggagcgga i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75375790 1453 - 133195287 CTGAGAACCCA------------------------------CAAAAAGTTTCTGAAAATCTCCAAAGCAGGTGAGATCGAAACGGAGTTCAGGGCTGCCACGACCtgatgggtcatgattccagaggaagggaagggcaaagaactaagtctgatatcagaggttttcccttaaaactatttgccaaattcttaagctgtgaaaagcaagaagctaagcatctaag--aaagtcactgagacactgagcagagtagagtgttccatggcctcccagtgctgaagagtgagaaactggaagtcaaggctccctagtgaggagcggcactaaggaacaccccaggctgggaccaccggtgggccgccccctagggtcagggtgaaccaccagctgcacaaaagctgcaacccatcctgaggtcagctgagcctgtggctggatcgaggtgatctgcgagcagcggctatctccagagcagagggcagaccctctctggaggccagcaacatcactcagagccccgaaaatcccctaaacataacttctgacatctcaataaacaataaccaggcatat-catggggcaggaccaagaaaaacaaagaccacagaaagagactcagggatgaccacacatgacagttaccaaacgcggtctttaaaaacatatgactaaagtatttaagaggacagatgacaagagggaaagtctcggcagagaattaaagcctggt----aaaaaagaaccaagtagaaactctagagtgataaataaaatacaatttctgaaagtaagaacataatggatgcaacagaagagtggaataataaacatgaaaaaaggtgactaaaaaacaaccaggctggctgaatcatggagagaaagaaagaagtggaaaatacaggagaaaaagagcccagaagataggacacagacatggtat-------------ggtcgaagactgaaaaccccgaggagaggcaaggtcagcacagaagca-----gtatgaaagaaactgcagccaggaatctccaaaaccgaccacaccaccaagctatagatgtaaaaagcgctaagaaccttctgagcaggataaacacaaagaaaaccacacagtggaagcatggtatggtaagaaattaagaaatttctttctgagaaagaaaggcagagaaaaccctacccacccatggtggtggacgggtggtggcactgccttcggcactgagcctgcaaggatgacttctcacctgcaatgagcatggcaggctgacaagggtcccccaaagactgattcacgtcctaagccccagatcccatgagcatt--accttatgcaacaaaagaagcaatgattcagttaaaggccttgggaggaggggcttttcctggagtatctgggtaggtgggtcctaaat-aaaaccccatgggtcctctgagaggcagagggagttgacagacagacccacgtggaacaggaggtgacgtgaagacggagcgga i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73240565 1436 - 125196307 CCGAGAACCCA------------------------------CAAAAAGTTTCTGAAAATCTCCAAAGCAGGTGAGATCGAAACGGAGTTCAGGGCTGCCACGACCTGATGGGTCATGATTccagaggaagggaagggcaAAGAACTAAGTCTGATATCAGAGGTTTTCCCTTAAAACTATTTGCCAAATTCTTAAGCTGTGAAAAGCAAGAAGCTAAGCATCTAAG--AAAGTCACTGAGACACTGAGCAGAGTAGAGTGTTCCATGGCCTCCCAGTGCTGAAGAGTGAGAAACTGGAAGTCAAGGCTCCCTAGCGAGGAGCGGCACTAAGGAACACCCCAGGCTGGGACCACCGGTGGGCCGCCCCCTAGGGTCAGGGTGAGCCACCAGCTGCACAAAAGCTGCAACCCATCCTGAGGTCAGCTGAGCCTGTGGCTGGATCAGGGTGATCTGCGAGCAGCGGCTATCTCCAGAGCAGAGGGCAGACCCTCTCTGGAGTCCAGCAACATCACTCAGAGCCCCGAAAATCCCCTAAACATAACTTCTGACATCTCAATAAACAATAACCAGGCATAT-CATGGGGCAGgaccaagaaaaacaaagaccACAGAAAGAGACTCAGGGATGACCACACATGACAGTTACCAAACGcggtctttaaaaaaatatgactaAAGTATTTAAGAGGACAGATGACAAGAGGGAAAGTCTCAGCAGAGAATTAAAGCCTGGT----AAAAAGGAACCAAGTAGAAACTCTAGagtgataaataaaatacaatttctgaAAGTAAGAACATAA-----------------TGGAATAATGAACATGAAAAAAGGTGACTAGAAAACAACCAGGCTGGCTGAatcatggagagaaagaaagaagtggaaaatacaggagaaaaagaGCCCAGAAGATAGGAGACAGACATGGTAT-------------GGTCGAAGACTGAACACCCCGAGGAGAGGCGAGGTCAGCACAGAAGCA-----GTATGAAAGAAACTGCAGCCAGGAATCTCCAAAACCGACCACACCACCAAGCTATAGATGTAAAAAGCGCTAAGAACCTTCTGAGcaggataaacacaaagaaaaccacacgGTGGAAGCATGGTATggtaagaaattaagaaatttctttctgagaaagaaaggcagagaaaaccCTACCCACCCATGGTGGTGGACGGGTGGTGGCACTGCCTTTGGCACTGAGCCTGCAAGGATGACTTCTCACCTGCAATGAGCATGGCAGGCTGACAAGTGTCCCCCAAAGACTGATTCACGTCCTAAGCCCCAGATCCCATGAGCATT--ACCTTATGCAACAAAAGAAGCAATGATTCAGTTAAAGGCCTTGGGAGGAGGGGCTTTTCCTGGAGTATCTGGGTAGGTGGGTCCTAAAT-AAAACCCCATGGGTCctctgagaggcagagggagtTGACAGACAGACCCACGTGGAACAGGAGGTGACGTGAAGACGGAGTGGA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72072442 1433 - 125710982 CTGAGAACCCA------------------------------CAAAAAGTTTCTGAAAATCTCCAAAGCAGGTGAGATCGAAATGGAGTTcagggctgccaggacctgatgggtcatgattccagaggaagggaagggcaaagaactaagtctgatatcagaggttttcccttaaaaccatttgccaaattcttaagctgtgaaaagcaagaagctaagcatctaag--aaagtcactaagacactgagcagagtagagtgttccatggcctcccagtgctgaagagtgagaaactggaagtcaaggctccctagcgaggagcggcactaaggaacaccccaggctgggaccaccggtgggccgccccctagggtcagagtgaacca-cagctgcacaaaagctgcaacccatcctgaggtcagctgagcctgtggctggatcgaggtgatctgtgagcagcggctatctccagagcagagggcagaccc-------------------tcactcagagccccgaaaatcccctaaacataacttctgacatctcaataaacaataaccaggcatat-cgtggggcaagaccaagaaaaacaaagaccacagaaagagactcagggatgaccacacatgacagttaccaaacgcggtctttaaaaaaatatgactaaagtatttaagaggacagatgacaagagggaaagtctcagcagagaattaaagcctggt----aaaaaagaaccaagtagaaactctagagtgataaataaaatacaatttctgaaagtaagaacataatggatgcaacagaagagtggaataatgaacatgaaaaaaggtgactagaaaacaaccaggctggctgaatcatggagagaaagaaagaagtggaaaatacaggagaaaaagagcccagaagataggagacagacatggtac-------------ggtcgaaaactgaaaaccctgaggagaggcgaggtcagcacagaagca-----gtatgaaagaaactgcagccaggaatctccaaaaccgaccacaccaccaagctatagatgtaaaaagcgctaagaaccttctgagcaggataaacacaaagaaaaccacacgggggaagcatggtatggtaagaaattaagaaatttctttctgagaaagaaaggcagagaaaaccctacccacccatggtggtggacgggtggtggcactgccttcagcactgagcctgcaaggatgacttctcacctgcaatgagcatggcaggctgacaagtgtcccccaaagactgattcacgtcctaagccccagatcccatgagcatt--accttatgcaacaaaagaagcaatgattcagttaaaggccttgggaggaggggcttttcctggagtatctggggaggtgggtcctaaat-aaaaccccatggatcctctgagagccagaggttgttgagagagagacccacgtggaacaggaggtgatgtgaagatggagcgga i chlSab2.chr9 I 132 C 0 s calJac3.chr12 75529863 1410 - 121768101 ctgagaaccca------------------------------ggaaaagtttctgaaaatctccaaagcaggtgagatcaaaacggagttcagggctgccaggacctgaggggtcatggctccagaggaagggaagggcaaagaactaagtctgttatcagaagttttcccttaaagctattt-------------gctgtaaaaagcaag-----aagagtctaagataaagtcactacgacactgagc-----agtgtgttccatggcctcccagtgctgcagagtgagacactggaggtcaaggctccctagggaggagcggccctagggaacatcccagg------------------------ctagggtcagggtgaatcaccagctgcacaaaagctgcaacccagcctgaggtcagcttagtctgcagctggatcgaggtgatctgagaggagtggctacctccagagcagagcacagaccctctctggaggctggcaacatcactcagag-cctgacgatcccctaaacgtaacttctgacatctcaataaacaataaccaggcatatccaacggacaggatcaagaaaaacaaagaccacagaaagagactcagggatgaccacacatgacagctaccaaacacagtctttacaaacatatgattaaagtattttggagaacagacggcaagatggaaaggctcagcagag----gaagcctggttaaaaaaaaagaaccaaatggaaactctcgagtgatacataaaatacaatttctgaaagtaagaacataatggatgcaacagaagagcagaatgatgaacaggaaaaag-gtgaggagaaaacaacccggctggctgaagcatcaggagaaagaggtaagtggaaaatacaagagaaaaagagccaagaagacaggagacagacagggtatattactccaagtaattccaagaacgaaaacccggagaagaggcgaggtcagcacagaacaa-----atattaaagaaactgtagccaggaatctccaaaaccaaccaaac---caggttacagatgtaaaaagtgcttggaaccttctgagcaggatgaacacaaagaaaaccacacTGGGGGAGCATGGTATGGTAAGAAATTAGGAAATTTCTTTCTGAGAAAGAAAGGCAGAGAAAAGCCTACCCACACATGGTAGTAGACAGGTGGTGGCACTGCCTTTAGCACTGAGACTGGGAAGATGACTTCTTACCAGCAATGAGGgtggcaggctatcaagtgtcccccaaagactgaatcacttcctaagccccagatcccatgagcatt--accttatgcaacaaaagaagtgatgattgagttaaaggccttgggaggaggggcttttcctggagtatctg----ggtgggccctaaataaaaacctcatgggtcctctgagaggcagagggagtt----gagagacccacgtggaggagaaggtaatgtgaagacagagcaga i calJac3.chr12 C 0 I 1079 e canFam3.chr4 27695571 3210 + 88276631 I e mm10.chr14 24139753 4475 + 124902244 I a score=3616830.000000 s hg38.chr10_KI270825v1_alt 40707 1521 + 188315 tgagatttgaagatgacagtgatgtggccacagcaaaggcttggcagcagccaccagaagctgggaggggcaaggaacaggctctctcctcaagcccggagggagcgaaggttggccaacaatttgactgacccagtggtcctgagtgtggacttctggcctccagaactgtgggaggataaacctgtgtgtttgaagc--cacacagtctgtggtaattgggtacagcggccacaggaaactactacacaaagagagccagggaccaggaatgatatctttaaagcacccaagtaaaacatccaccaatctaaaattctatatccagtgagaatctccaaaaacgatatt-aaaatggacattttcagacacaaacactgacaggatgtgtcaccaaaaaacctgcactacaagaaaaacatttctgcaagttgttcagcagaaagaaaacaaaatca----gaagcacaaaactgcaggaaggaataaagagcaatggaaatgtaaaaggcaaaaaccgatgaataattgatgtgcaaatggacagactgagtcagagttaaagtatctgtagaattaaaatgagaaaagtatggccggggacagtgccttgcgcctgtaatcccgggtgcagtgccttgcactttgtgaggctaagacaggcggctcacttgaggtcaggagtttcaagaccagcctggccaacatggtgaaaccccgtctttactaaaaatacaaaaattagccagatgtggtgacaggcacctgtaatcccagctactcggcaggctgaggcaggaaaatcgcttgaacctgggaggcagaggttgcagcgagccgagatcgtaccattgcactccggcctgggcgacagagcgagattctgcctcaaaaaataaaataataaaaaaataaaatgcgaatagtatcaaagttagaaaagagataaatggagttagtggtttgatgtcttagaattatcagggaagtggccaaagcaatgatttctcttagcagtaagtcaaaggtgcacactgtgaggtctattttaacccccaaaagaataaaatagaaacaactaaacactagtggatgtgagaggataacagtagatgatataggggcagaataaaacaaaacacatgattcatttttaaaaagcaagaaagaagggacaaacataaacgaggtagaatgaatagaaaacaaacagtaagatgggaaatGTCTACTTTATGTAATGAGGTAAATACTCTTGATGAAACAATCAAGACTGCcacaggggtgttcagattgtggaaattcctcacactgctcacttttctgtaaatgaatgtgtgcattgctgtatgtatgttacacttggataaaatttttaaaaagacagattgccacagtggatttaaaaagtcccacatgctgcttataagggatatttaaatataaagtgacagaaaagtttgaagtaaaagaaaaagataaactgtgccaaagataaccaaaagaaaactggtaatgtcaataaaa s panTro4.chr10 76411328 1521 + 133524379 tgagatttgaagatgacagtgatgtggccacagcaaaggcttggcagcagccaccagaagctgggaggggcaaggaacaggctctctcctcaagccccgagggagcgaaggttggccaacaatttgactgacccagtggtcctgagtgtggacttctggcctccagaactgtgggaggataaacctgtgtgtttgaagc--cacacagtctgtggtaattgggtacagcggccacaggaaactactacacaaagagagccagggaccaggaatgatatctttaaagcacccaagtaaaacatccaccaatctaaaattctatatccagtgagaatctccaaaaacgatatt-aaaatggacattttcagacacaaacactgacaggatgtgtcaccaaaaaacctgcactacaagaaaaacatttctgcaagttgtttagcagaaagaaaacaaaatca----gaagcacaaaactgcaggaaggaataaagagcaatggaaatgtaaaaggcaaaaaccgatgaataattgatgtgcaaatggacagactgagtcagagttaaagtatctgtagaattaaaatgagaaaagtatggccgggcacagtgccttgcgcctgtaatcccgggcgcagtgccttgcactttgtgaggctaaggcaggcggctcacttgaggtcaggagtttcaagaccagcctggccaacatggtgaaaccccgtctttactaaaaatacaaaaattagccagatgtggtgacaggcacctgtaatcccagctacttggcaggccgaggcaggaaaatcgcttgaacctgggaggcggaggttgcagtgagccgagatcgtaccattgcactccggcctgggcgacagagcgagattctgcctcaaaaaataaaataataataaaataaaatgcaaatagtatcaaagttagaaaagagataaatggagttagtggtttgatgtcttagaattatcagggaagtggtcaaagcaatgatttctcttagcagtaagtcaaaggtgcacactgtgaggtctattttaacccccaaaagaataaaatagaaacaactaaacactagtagatgtgagaggataacagtagatgatatagaggcagaataaaacaaaacacatgattcatttttaaaaagcaagaaagaagggacaaacataaacgaggtagaatgaatagaaaacaaacagtaagatgggaaatGTCTACTTTATGTAATGAGGTAAATACTCTTGATGAAACAATCAAGACTGCcacaggggtgttcagattgtggaaattcctcacactgctcacttttctgtaaatgaatgtgtgcattgctgtatgtatgttacacttggataaaatttttaaaaagacagattgccacagtggatttaaaaagtcccacatgctgcttataagggatatttaaatataaagtgacagaaaagtttgaagtaaaagaaaaagataaactgtgccaaagataaccaaaagaaaactggtaatgtcaataaaa i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76079473 1517 - 133410057 tgagatttgaagatgacagtgatgtggccacagcaaaggcttggcggcagccaccggaagctgggaggggcaaggaacaggctctctcctcaagccccgagggagcgaaggttggccaacaatttgactgacccagtggtcctgagtgtggacttctggcctccagaactgggggaggataaacctgtgtgtttgaagc--cgcacagtctgtggtaattgggtacagcggccacaggaaactactacacaaagagagccagggaccaggaatgatatctttaaagcacccaagtaaaacatccaccaatctaaaattctatatccagtgagaatctccaaaaatgatatt-aaaatggacattttcagacacaaacactgacaggatgtgtcaccaaaaaacctgcactacaagaaaaacatttctgcaagttgtttagcagaaagaaaacaaaatca----gaagcacaaaactgcaggaaggaataaagagcaatggaaatgtaaaaggc-aaatccgatgaataactgatgtgcaaatggacagactgagtcagagttaaagtatctgtagaattaaaatgagaaaagtatggccgggcgcagtgccttgcgcctgtaatcccggatgcagtgccttgcactttgggaggccaaggcgggcggctcacttgaggtcaggagtttcaagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccagatgtggtgacaggcacctgtaatcccagctactcagcaggctgaggcaggaaaatcgcttgaacctgggatgcggaggttgcagtgagccgagattgtaccactgcactccggcctgggcgacagagcgaaattctgcctcaaaaaaaataataataataaaataaaatgagaatagtatcaaagttagaaaagagataaatggagttagtggtttgatgtcttagaattatcagggaagtggtcaaagcaatgatttctcttagcagtaagtcaaaggtgcacactgtgaggtctattttaacccccaaaagaataaaatagaaacaactaaacactagtagatgtgagaggataacagtagatgatataggggcagaataaaac-aaacacatgattcatttttaaaaagcaagaaagaa--gacaaacataaacgaggtagaatgaatagaaaacaaacagtaagatgggaaatgtctactttatgtaatggggtaaatactcttgatgaaacaatcaagactgccacaggggtgttcaaattgtggaaattcctcacactgctcacttttctgtaaatgaatgtgtgcattgctgtatgtatgttacacttggataaaattttttaaaagacagattgccacagtggatttaaaaagtcccacatgctgcttataagcgatatttaaatataaagtgacagaaaagtttgaagtaaaagaaaaagataaactgtgccaaagataaccaaaagaaaactggtaatgtcaataaaa i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35022555 1511 + 104879549 taagatttgaagatgacagtgatgtggccacagcaaaggcttggcaagagccaccagaagctgggaggggcaaggaacaggctctctcctcaagccccgagggagcaaaggttggccgacaatttgactgacccagtggtcctgagtgtggacttccggcctccagaactgtgggaggataaacccgtgtgtttgaagc--cacacagtctgttgtaattgggtacagcggccacaggaaactactacacaaagagagccagggaccaggaatgatatctctaaagcacccaagtaaaacatccaccaatctaaaattctatatccagtgagaatctccaaaaacgatatt-aaaatggacactttcagacacaaacactgacaggatgtgtcaccaaaaaacctgcactacaagaaaaacatttctgcaagttgtttagcagaaagaaaacaaaatca----gaagcacaaaactgcaggaaggaataaagagcaatggaaatgtaaaaggcaaaaaccgatgaataactgatgtgcaaatggatagactgagtcagagttaaagtatctgtagaattaaaacgagaaaagtatggccgggcgcagtgccttgcgcctgtaatcccaggcgcagtgccttacactttgggaggccaaggcgggcggctcacttgaggtcaggagtttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccagatgtggtgacaggcacctgtaatcccagctactcggcaggctgaggcaggaaaatcgcttgaacctgggaggcggaggttgcagtgagccgagatcgtaccactgcactccagcctgggcgacagagcgagattctgcctcaaaaaataaaataataataaaataaaatgagaatagtatcaaagttagaaaatagataaatggagttagtggtttgatgtcttagaattatcagggaagtggtcaaagcaatgatttctcttagcagtaagtcaaaggtgcacgctgtgaggtctattttaacccccaaaagaataaaatagaaacaactaaacactagtagatgtgagaggataacagtagatgatagaggggcagaataaaac-aaacacatgattcatttttaaaaagcaagaaagaagggacaaacataaacgaggtagaatgaatagaaaacaaacagtaagatgggaaatGTC-----TATGTAATGGGGTAAATACTCTTGACGTAA----CAAGACTGCcacaggggtgttcagattgtggaaattcctcacactgctcacttttctgtaaatgaatgtgtgcattgctgtacgtatgttacactcggataaaatttttaaaaagacagattgccacagtggatttaaaaagtcccacatgctgcttataagggatatttaaatataaagtgacagaaaagtttgaagtaaaagaaaaagataaactgtgccaaagataaccaaaagaaaactggtaatgtcaataaaa i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73815372 1506 - 130959383 tgaaatttgaaggtgacagtgatgtggccacagcaaaggcttggtggcagccactagaagctggcaggggcaaggaacaggctctctcctcaagccccgagggagcgaaggctggccaacaatttgactgacccagtggtcctgagtgtggacttctggcctccggaact--gggaggataaacctgtgtgtttgaagccacacacagtctgtggtaattgggtacagcagccactggaaactactacacaaagagagccatggaccaggaatggtatctttaaagcacccaagtaaaacatccaccaatctaaaattctatatccagtgaaaatctccaaaaacgatattaaaaatggacattttcagacacaaacactgacaggatgtgtcaccaacaaacctgcattataagaaaaacatttctgcgagttgtttagcagaaagaaaacaaagtaagaaagaagcacaaaactgcaggaaggaatgaggagcaatggaaatgtaaaaggcaaaaactgatgaataactgatgtgcaaatggatagactgagtcggagttaaagtagctgtagaattaaaatgagaaaagtatggccgggcacagtgccttgtgcctgtaatcccag-------------aactttgggaggctgaggtgggcggctcac-tgaggtcaggagtttcaagaccagcctggccaacatggtgaaatcccatctttactaaaaatacaaaaattaaccacatgtggtgacaggtgcctgtaatcccagccacttggcaggctgaggcaggaaaattgcttgagcctgggaggcggaggttgcagtgagccgagatctcaccactgcactccagcctgggtgacagagtgagattctgcctcaaaaactaaaataatagtaaaataaaatgagaatagtatcaaagctagaaaagagacaaatggagttagtggtttcctgttttacaattaccagggaagtagtcaaagcaatgatttctcctagcagtaagtcaaaggtgcacgctgtgacatctagtttaacccccaaaagaataaaatagaaac-----aacactagtagatgtgaaaggataatagtagatggtataggggcagaataaaac-aaacacatgattaatttttaaaaagcaagaaggaagggacaaacatagatgagctagaatgaatagaaaacaaatagtaagatggcaaatGTCTACTTTATGTAATAGGGTAAATACTCCTGATGAAACAATCAAGACTGTcacaagggtgttcagattgtggaaattcctcatgctgctcacttttctgtaaatgaatgtgtgcattgctgtatgtatgttacacttggataaagtttttaaaaagacactttgccacagtggatttaaaaagtcccacatgctgcttacaagggatatttaaatataaagtgacagaaaaatttgaagtaaaagaaaaagataaactgtgccaaagataaccaaaagaaaactggtaatgtcaataaaa i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75377243 1499 - 133195287 tgaaatttgaaggtgacagtgatgtggccacagcaaaggcttggtggcagccactagaagctggcaggggcaaggaacaggctctctcctcaagccccgagggagcgaaggctggccaacaatttgactgacccagtggtcctgagtgtggacttctggcctccggaact--gggaggataaacccgtgtgtttgaagccacacacagtctgtggtaattgggtacagcagccatgggaaactactacacaaagagagccatggaccaggaatggtatctttaaagcatccaagtaaaacatccaccaatctaaaattctatatccagtgaaaatctccaaaaacgatatt-aaaatggacattttcagacacaaacactgacaggatgtgtcaccaacaaacctgcattataagaaaaacatttctgcgagttgtttagcagaaagaaaacaaagtaagaaagaagcacaaaactgcaggaaggaatgaggagcaatggaaatgtaaaaggcaaaaactgatgaataactgatgtgcaaatggatagactgagtcggagttaaagtagctgtagaattaaaatgagaaaagtatggccgggcacagtgccttgtgcctgtaatcccag-------------cactttgggaggctgaggtgggcggctcac-tgaggtcaggagtttcaagaccagcctggccaacatggtgaaaccccatctttactaaaaatacaaaaattaaccacatgtggtgacaggtgcctgtaatcccagccacttggcaggctgaggcaggaaaattgcttgagcctgggaggcggaggttgcagtgagccgagatctcaccactgcactccagcctgggtgacagagtgagattctgcctcaaaaactaaaataataataaaataaaatgagaatagtatcaaagctagaaaagagacaaatggagttagtggtttcctgttttacaattatcagggaagtagtcaaagcaatgatttctcctagcagtaagtcaaaggtgcacgctgtgacatctagtttaacccccaaaagaataaaatagaaac-----aacactagtagatgtgaaaggataatagtagatggtataggggcagaataaaac-aaacacatgattaatttttaaaaagcaagaaggaagggacaaacatagatgaggtagaatgaatagaaaacaaatagtaagatggcaaatGTCTACTTTATGTAATAGGGTAAATACTCCTGATGAAACAATCAAGACTGTcacaagggtgttcagattgtggaaattcctcacgctgctcacttttctgtaaatgaatgtgtgcattgctgtatgtatgttacacttggataaagtttttaaaaagacacattgccacagtggatttaaaaagtcccacatgctgcttacaagggatatttaaatataaagtgacagaaaaatttgaagt------aaaagataaactgtgccaaagataaccaaaagaaaactggtaatgtcaataaaa i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73242001 1503 - 125196307 TGAAATTTGAAGGTGACAGTGATGTGGCCACAGCAAAGGCCTGgtggcagccaccagaagctggcaGGGGCAAGGAACAGGCTCTCTCCTCAAGCCCCGAGGGAGCGAAGGCTGGCCAACAATTTGACTGACCCAGTGGTCCTGAGTgtggacttctggcctccggaACT--GGGAGGATAAACCCGTGTGTTTGAAGCCACACACAGTCTGTGGTAATTGGGTACAGCAGCCACGGGAAACTACTACACAAAGAGAGCCATGGACCAGGAATGGTATCTTTAAAGCACCCAAGGAAAACATCCaccaatctagaattctatatccagtgaaaatctccaaaaacaatatt-aaaatggaCATTTTCAGACACAAACACTGACAGGATGTGTCACCAACAAACCTGCATTATAAGGAAAACATTTCTGCGAGTTGGttagcagaaagaaaacaaagtaagaaaGAAGCACAAAACTGCAGGAAGGAACGAGGAGCAATGGAAATGTAAAAGGCAAAAACTGATGAATAACTGATGTGCAAATGGATAGACTGAGTCGGAGTTAAAGTAGCTGtagaattaaaatgagaaaagtatggccgggcacagtgccttgtgcctgtaatcccag-------------cactttgggaggctgaggagggcggctcac-tgaggtcaggagtttcaagaccagcctggccaacatggtgaaactccatctttactaaaaatacaaaaattaaccacatgtggtgacaggtgcctgtaatcccagccacttggcaggctgaggcaggaaaattgcttgagcctgggaggcggaggttgcagtgagccgagatctcaccactgcactccagcctgggtgacagagcgagattctgcctcaaaaactaaaataatagtaaaataaaatgagaatagtatcaaagctagaaaagagacaaatGGAGTTAGTGGTTTCCTGTTTTACAATTATCAGGGAAGTAGTCAAAGCAATGATTTCTCCTAGCAGTAAGTCAAAGGTGCACGCTGTGACATCTAGTTTAAcccccaaaagaataaaatagaaac-----aacactAGTAGATGTGAAAGGATAATAGTAGATGGTATAGGGgcagaataaaac-aaacacatgattcatttttaaaaagcaagaaggaAGGGACAAACATAGATGAGGTAGaatgaatagaaaacaaacagtaaGATGGCAAATGTCTACTTTATGTAATAGGGTAAATACTCCTGATGAAACAATCAAGACTGTCACAAGGGTGTTCAGATTGTGGAAATTCCTCACGCTGCTCACTTTTCTGTAAATGAATGTGCGCATTGCTGTATGTATGTTACACttggataaaatttttaaaaagacacattgCCACAGTGGATTT--AAAGTCCCACATGCTACTTACAAgggatatttaaatataaagtgacagaaaagtttgaagtaaaagaaaaagataaactgtgccaaagataaccaaaagaaaactggtaatgtcaataaaa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72073875 1505 - 125710982 tgaaatttgaaggtgacagtgatgtggccagaataaaggcttgatggcagccaccagaagctggcaggggcaaggaacaggctctctcctcaagccccgagggagcgaagactggccaacaatttgactgacccagtggtcctgagtgtggacttccggcctccggaact--gggaggataaacccgtgtgcttgaagctacacatagtctgtggtaattgggtacagcagccacgggaaaccactacacaaagagagccaggcaccgggaatggtatctttaaagcacccaagtaaaacatccaccaatctaaaattctatatccagtgaaaatctccaaaaatgatatt-aaaatggacattttcagacacaaacactgacaggatgtgtcaccaacaaacctgcattataagaaaaacatttctgcgagttgtttagcagaaagaaaacaaaataagaatgaagcacaaaactgcaggaaggaatgaagagcaatggaaatgtaaaaggcaaaaactgatgaataactgatgtgcaaatggatagactgagttggagttaaagtagctgtagaattaaaatgagaaaagtatggccgggcacagtgccttgtgcctgtaatcccag-------------cactttgggaggctgagctgggcggctcac-tgaggtcaggagtttcaagaccagcctggccaacatggtgaaaccccatctttactaaaaatacaaaaattaaccacatgtggtgacagatgcctgtaatcccagccacttggcaggctgaggcaggaaaattgcttaagcctaggaggcggaggttgcagtgagccgagatctcaccactgcactccagcctgggtgacaaagcgagattccacctcaaaaactaaaataataataaaataaaatgagaatagtatcaaagctagaaaagagacaaatggagttagtggtttgctgttttacaattatcagggaagtagtcaaagcaatgatttctcctagcagtaagtcaaaggtgcatgctgtgacatctagtttaacccccaaaagaataaaatagaaac-----aacactagtagatgtgaaaggataatagtagatggtataggggcagaataaaac-aaacacatgattcatttttaaaaagcaagaaggaagggacaaacgtagatgaggtagaatgaatagaaaacaaacagtaagatggcaaatGTCTACTTTATGTAATAGGGTAAATACTCCTGACGAAACAATCAAGACTGTcacaagggtgttcagattgtggaaattcctcacgctgctcacttttctgtaaatgaatgtgcgcattgctgtatgtatgttacacatggataaaatttttaaaaagacagattgccacagtggatttaaaaagtcccacatgctgcttacaagggatatttaaatataaagtgacagaaaagtttgaagtaaaagaaaaagataaactgtgccaaagataaccaaaagaaaactggcaatgtcaataaaa i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27695571 3210 + 88276631 I e mm10.chr14 24139753 4475 + 124902244 I e calJac3.chr12 75531273 1079 - 121768101 I a score=1022420.000000 s hg38.chr10_KI270825v1_alt 42228 348 + 188315 atatcacgtaaaatagactttcagaaagaaacattcctggagatcaagaagggcattttataacgataaaaaggttaatttaccaggaaggtgtaacaatgcaaaaggtgtatgtatctaacgacaacttcaagatatatattgaaaaacacctgaagagctaaaaggaagaatagacaaaGGGCTATTTTTTAAAGACACTAGCACCACCGGACAAATGCCaaacataatggagatggcacctacggagaaaggagcagagggcacaagagtggaggccaaagagagtgaaggaaaaaaaacaaaaagcaaaataagagagaaaccttgccttgagtaacaGGTTGG s panTro4.chr10 76412849 348 + 133524379 atatcacgtaaaatagactttcagcaagaaacattcctggagatcaagaagggcattttataacgataaaaaggttaatttaccaggaaggtgtaacaatgcaaaaggtgtatgtatctaacgacaacttcaagatatatactgaaaaacacctgaagagctaaagggaagaatagacaaaGGGCTattttttaaagacactagcaccaccggacaaatgccaaacataatggagatggcacctacgcagaaaggagcagagggcacaagagtggaggccaaagagagtgaaggaaaaaaaccaaaaagcaaaataagagagaaaccttgccttgagtaacaGGTTGG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76080990 341 - 133410057 atatcacataaaatagactttcagcaagaaacattcctggagatcaagaagggcattttataacgataaaaaggttaatttaccaggaaggtgtaacaatgcaaaaggtgtatgtacctaatgacaacttcaagatatatactgaaaaacacctcaagagctaaaaggaagaatagacaaaGGGCTACTTTTCAAAGACGCTAGCACCACTggacaaatgccaaacataatggagatggcacctacggagaaagaagcagagggcacaagagtagaagccaaagagagtgaaggaa-------aaaaagcaaaataagagagaaaccttgccttgattaacaGGTTGG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35024066 348 + 104879549 atatcacataaaatagactttcagcaagaaacattcctggagatcaagaagggcattttataatgataaaaaggttaatttaccaggaaggtgtaacaatgcaaaaggtgtgtgtacctaacgacaacttcaagatatatactgaaaaacacctgaagagctaaaaggaagaacagacaaaGGGCTATTTTTCAAAGATGCTAGCACCACTggacaaatgccaaacataatggagatggcgcctatagagaaaggagcagagggcacaagagtggaggccaaagagagtgaaggaaaaaaaccaaaaagcaaaataagagagaaaccttgccttgattaacaGGTTGG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73816878 345 - 130959383 atatcacataaaatagactttcagcaagaaacactcctggagatcaagaagggcattttataatgataaaaaggtcaatttaccaggaaggtataacaatgcaaaaggtgtatgtacctcatgacaacttcaagatatgtactgaaaaagacctgaagagctaaaaggaagaatagacaaaGGGCTATTTTTCAAAGACGCTAACACCACTGGACAAATGCCAAATATACCGGAAATGGCACCTGCAGAGAAAGGAGCAGAGGGCACAAGAGTGGAGACCAAAGAGAGTGAAGGAA---AACCAAAAAGCAAAATAAGAGAGAAACCTTGCCTTGAATAATAGGTTGG i rheMac3.chr9 C 0 I 231 s macFas5.chr9 75378742 345 - 133195287 atatcacataaaatagactttcagcaagaaacactcctggagatcaagaagggcattttataatgataaaaaggtcaatttaccaggaaggtataacaatgcaaaaggtgtatgtacctcatgacaacttcaagatatgtactgaaaaagacctgaagagctaaaaggaagaatagacaaaGGGCTATTTTTCAAAGACGCTAACACCACTGGACAAATGCCAAATATACCGGAAATGGCACCTGCAGAGAAAGGAGCAGAGGGCACAAGAGTGGAGACCAAAGAGAGTGAAGGAA---AACCAAAAAGCAAAATAAGAGAGAAACCTTGCCTTGAATAACAGGTTGG i macFas5.chr9 C 0 I 23 s papAnu2.chr9 73243504 345 - 125196307 atatcacataaaataGACTTTCAGCAAGAAACATTCCTGGAGATCAAGAAGGgcattttataatcataaaaaggTCAATTTACCAGGAAGGTATAACAATGCAAAAGGTGTATGTACCTCACGACAACTTCAAGATATGTACTGAAAAAGACCTGAAGAGCTAAAAGGAAGAATAGACAAAGGGCTATTTTTCAAAGACGCTAACACCACTCGACAAATGCCAAATATACCGGAAATGGCACCTGCAGAGAAAGGAGCAGAGGGCACAAGAGTGGAGACCAAAGAGAGTGAaggaa---aaccaaaaagcaaaataagagaGAAACCTTGCCTTGAATAACAGGttgg i papAnu2.chr9 C 0 I 23 s chlSab2.chr9 72075380 345 - 125710982 atatcacataaaatagactttcagcaagaaacattcctggagatcaagaagggcattttataatgacaaaaaggtcaatttaccaggaaggtataacaatgcaaaaggtgtatgtacctcacgacaacttcaagatatgtactgaaaaagacctgaagagctaaaaggaagaatagacaaaGGGCTATTTTTCAAAGACGCTAACACCACTGGACAAATGCCAAATATACCGGAAATGGCACCTGCAGAGAAAGGAGCAGAGGGCACAAGAGTGGAGACCAAAGAGAGTGAAGGAA---AACCAAAAAGCAAAATAAGAGAGAAACCTTGCCTTGAGTAACAGGTTGG i chlSab2.chr9 C 0 I 15 s calJac3.chr12 75532352 335 - 121768101 atctcacataaaatagacgttcagcaagaaacattgctggagatcaagaagtac-----gtaacaataaaagggtcaatttaccaggaagatataacaattcaaaacgtgtatgtacctcatgacaacttcaagatatatactgaaaaacgcctgaggagctaaaagaaagaatagacaaCGGGCTATTTTTCAAAGATGTTAACGACGCTGGACAAATGGCAAATGTACTGGAGATGACGCGTACAGAGAAAGGAGCAGAGGGCACCAGAGCGGAGACCAA--------AAGGAAAAGAAGCAAAAAGCAAAATAAGAGAGAAACCTTGCCTTGATTAACAGGTTGG i calJac3.chr12 I 1079 C 0 e canFam3.chr4 27695571 3210 + 88276631 I e mm10.chr14 24139753 4475 + 124902244 I a score=379452.000000 s hg38.chr10_KI270825v1_alt 42576 181 + 188315 CA-----tttt-------------------tttttttttt---------tttttttgagacaggttctcactctgttgcctgggctagagtgcagtggcgtgatcacagttcactgcagctcttgacctcccaggctgaagctatcttcctgcctcagcctcttcggtagctggaactacaggcatgagccaccacaccaggctaatttttgta s panTro4.chr10 76413197 186 + 133524379 CAAtttttttt-------------------tttttttttt---------tttttttgagacagggtctcactctgttgcctgggctagagtgcagtggcgtgatcacagttcactgcagctcttgacctcccaggctgaagcaatcttcctgcctcagcctcttcggtagctggaactacaggcatgagccaccacaccaggctaatttttgta i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76081331 183 - 133410057 Ct---tttttt-------------------tttttttttt---------ttttttggagacagggtctcactctgttgcctgggctagagtgcagtggcgtgatcacagttcactgcagctcttgacctcccaggctgaagcaatcttcctgcctcagcctctttggtagctggaactacaggcatgagccaccgcaccaggctaatttttgta i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35024414 182 + 104879549 CA----Atttt-------------------tttttttttt---------tttttttgagacagggtctcactctgttgcctgggctagagtgcagtggcatgatcacagctcactgcagctcttgacctcccaggctgaagcaatctccttgcctcaacctcttcggtagctggaactacaggcatgagccaccacaccaggctaatttttgta i nomLeu3.chr18 C 0 C 0 s macFas5.chr9 75379110 180 - 133195287 -----tattta-------------------tcttatttta---------tttttttgagacagggtctcactctgttgccggggctagagtgcagtagcatgatcacagctcactgcagct-ttgaccccccaggctgaagcaatcttcctgcctcagcctcttcagtagctggaactacaggcatgagccaccacaccaggctaatttttgta i macFas5.chr9 I 23 I 2 s papAnu2.chr9 73243872 186 - 125196307 -----tatttatttatt-------------ttttatttta---------cttttttgagacagggtctcactctgttgccggggctagagtgcagtagcatgatcacagctcactgcagct-ttgaccccccaggctgaagcaatcttcctgcctcagcctcttcagtagctggaactacaggcatgagccaccacaccaggctaatttttgta i papAnu2.chr9 I 23 I 2 s chlSab2.chr9 72075740 208 - 125710982 -----tatttatttattttattttattttattttattttattttttttttttttttgagacagggtctcactctgttgcctgggctagagtgcagtagcatgatcacagctcactgcagct-ttgaccccccaggctgaagcaatcttcctgcctcagcctctgcagtagctggaactacaggcatgagccaccacaccaggctaatttttgta i chlSab2.chr9 I 15 I 4 s calJac3.chr12 75532687 166 - 121768101 --------------------------------CAATCttt---------ttttttggagacagggtctcactctgccacctgggctggagtgcagtggtgcgatcacagctcactgaagct-ttgacctcccaggctgaggcaatcttcctgcttcagcctcttcagtagctgggactacaagcaggacccaccacactaggctaatt------ i calJac3.chr12 C 0 C 0 e canFam3.chr4 27695571 3210 + 88276631 I e mm10.chr14 24139753 4475 + 124902244 I e rheMac3.chr9 73817223 231 - 130959383 I a score=552602.000000 s hg38.chr10_KI270825v1_alt 42757 177 + 188315 ttttttagtagagatggggtttcaccatgttggccaggctggtcttgaactccctgcctcaagtgatccacccacctcggcttcccaaagtgctgggattacaggcatgcgccaccatgcctggcctaaactttttctataaggggcaagatagtaaatattttaggctttgaaggc s panTro4.chr10 76413383 177 + 133524379 ttttttagtagagatggggtttcaccatgttggccaggctggtcttgaactccctgcctcaggtgatccacccacctcggcttcccaaagtgctgggattacaggcatgcgccaccatgcctggcctaaactttttctataaggggcaagatagtaaatattttaggctttgaaggc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76081514 177 - 133410057 ttttttagtagagatggggtttcaccatgttggccaggctggtcttcaactccctgcctcaagtgatccacccacctcggcctcccaaagtgctgggattacaggtgtgcaccaccatgcctggcctaaactttttctataaggggcaagatagtaaatattttaggctttgaaggc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35024596 177 + 104879549 ttttttagtagagatggggtttcaccatgttggccaggctggtcttgaactccctgcctcaagtgatccacccacctcggccttccaaagtgctgggattacaggtgtgcgccaccatgcctggcctaaactttttctgtaaggggcaagatagtaaatattttaggctttgaaggc i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73817454 177 - 130959383 ttttttagtagagatagggtttcaccatgttggctaggctggtcttgaactccctgcctcaagtgatccacccacctcagcctcccaaagtgctgggattacaggtgtgtgccaccatgcctggccTaaactttttctataaggggcaagatagtaaatactttaggctttgaaggc i rheMac3.chr9 I 231 C 0 s macFas5.chr9 75379292 177 - 133195287 ttttttagtagagatagggtttcaccatgttggctaggctggtcttgaactccctgcctcaagtgatccacccacctcagcctcccaaagtgctgggattacaggtgtgtgccaccatgcctggccTaaactttttctataaggggcaagatagtaaatactttaggctttgaaggc i macFas5.chr9 I 2 C 0 s papAnu2.chr9 73244060 177 - 125196307 ttttttagtagagatggggtttcaccatgttggctaggctggtcttgaactccctgcctcaagtgatccacccacctcagcctcccaaagtgctgggattacaggtgtgtgccaccatgcctggcctaaactttttctttaaggggcaagatagtaaatactttaggctttgAAGGC i papAnu2.chr9 I 2 C 0 s chlSab2.chr9 72075952 177 - 125710982 ttttttagtagagatggggtttcaccatggtggctaggctggtcttgaactacctgcctcaagtgatccacccacctcggcctcccaaagtgctgggattacaggtgtgtgccaccacgcctggccTaaactttttctataaggggcaagatagtaaatactttaggctttgaaggc i chlSab2.chr9 I 4 C 0 s calJac3.chr12 75532853 170 - 121768101 ttttttagtagagacaggctttcaccatgttggccaggctggtctcaaactccttgcctcaagtgatctacccaccttggcctcccaaagtactgtaattacaggtgtataccaccacgcctggcccaaactttttctgtaaggggcaag-------atactttaggctttgaaggc i calJac3.chr12 C 0 C 0 e canFam3.chr4 27695571 3210 + 88276631 I e mm10.chr14 24139753 4475 + 124902244 I a score=197984.000000 s hg38.chr10_KI270825v1_alt 42934 65 + 188315 aaaacggcaaaattaagcaattgttatcagcaaaggg--------ctaatagacttttttacatcttacattt s panTro4.chr10 76413560 65 + 133524379 aaaacggcaaaattaagcaattgttatcagcaaaggg--------ctaatagacttttttacatcttacattt i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76081691 65 - 133410057 aaaacggcaaaattaagcaattgttatcagcaaaggg--------ctaatagacttttctacatcttacattt i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35024773 63 + 104879549 aaaacagc-aaattaagcaattgttatcagcaaaggg--------ctaatagactttt-tacatcttacattt i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73817631 64 - 130959383 aaaacggcaaaattaagcaactgttagcagcaaaggg--------ctaacagattttt-tacatcttacattt i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75379469 64 - 133195287 aaaacggcaaaattaagcaactgttagcagcaaaggg--------ctaacagattttt-tacatcttacattt i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73244237 64 - 125196307 AAAACGGCAAAATTAAGCAACTGTTATCAGCAAAGGG--------CTAACAGATTTTT-tacatcttacattt i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72076129 64 - 125710982 aaaacggcaaaattaagcaactgttatcagcaaaggg--------ctaacagattttt-tacatctcacattt i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75533023 65 - 121768101 aaaatgccaaaattaagcaactgttatcagcaaaaca--------ctaacggacttctttacaccttacattt i calJac3.chr12 C 0 I 325 s canFam3.chr4 27698781 71 + 88276631 aaaacaaCAAAAACAAGCAATTGTTATTGCCAAAAGGTGTCTGCACCTGAAGACATTCTTACA--TTAcgttt i canFam3.chr4 I 3210 C 0 e mm10.chr14 24139753 4475 + 124902244 I a score=1937160.000000 s hg38.chr10_KI270825v1_alt 42999 599 + 188315 taagaagtgtaaaaacccatgctcagctcacagaccatttaaaaataggcag-tagtccagactcggtccatggccaatagtttgccaacccttgtcccagctgatagtgacagtgggccatg----aactacagtgtgatccactgaactccctaggcctaaggtcTTCATT------GTAAAAAGCGAAGAGAGGGAGGG----AGGCAGCCAGCTGCCCTACACTCTGCTGCTCACTGCCACCCCCAC---ACCTGATTGCCAGGGAGGGC-ACATTCTAGGACAGTAGACAGTAGACACACACCAG-GGCCCTGGGAGCCACGTTCCTAAGGGCCTCTTGCTTTAAAGGACAAATGCATCCTTTCCACAAGGGCTGTCTACCAGGGGATGTCTGACATCTCCTATCACTCAACTCCAGCCCTGGACTAGCATCTTGCTCCATAAGGATTATACAAGACTTGTTCATGAACACAGGACTGAGGCCAGA-AATGCCGAAGTTCTGCAGAAACCGACAGCTCTTGGTCACTACCAAGCAGCCTGTAAGAACCTAAAAACAAATGGCAAGCAAGGCACTCAgcagagattgcttcttgcctacccaatagct-atccctcc s panTro4.chr10 76413625 598 + 133524379 taagaagtgtaaaaacccatgctcagctcacagaccatttaaaa-taggcag-tagtccagactcagtccatggccaatagtttgccaacccttgtcccagctgatagtgacagtgggccatg----aactacagtgtgatccactgaactccctaggcctaaggtcTTCATT------GTAAAAAGGGAAGAGAGGGAGGG----AGGCAGCCAGCTGCCCTACACTCTGCTGCTCACTGCCACCCCCAT---ACCTGATTGCCAGGGAGGGC-ACATTCTAGGACAGTAGACAGTAGACACACACCAG-GGCCCTGGGAGCCACGTTCCTAAGGGCCTCTTGCTTTAAAGGACAAATGCATCCTTTCCACAAGGGCTGTCTACCAGGGGATGTCTGACATCTCCTATTACTCAACTCCAGCCCTGGACTAGCATCTTGCTCCATAAGGATTATACAAGACTTGTTAATGAACACAGGACTGAGGCCAGA-AATGCCGAAGTTCTGCAGAAACCGACAGCTCTTGGTCACTACCAAGCAGCCTGTAAGAACCTAAAAACAAATGGCAAGCAAGGCACTCAgcagagattgcttcttgcctacccaatagct-atccctcc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76081756 600 - 133410057 taagaagtgtaaaaacccatgctcagctcacagaccatttaaaaacaggcag-tggtccacactcggtccatggccaatagtttgccaacccttgtcccagctgatagtgacagtgggccatg----aactacagtgtgatccactgaactccctaggcctaaggtcTTCATT------GTAAAAAGGGAAGAGAGGGAGGG----AGGCAGCCAGCTGCCCTACACTCTGCTGCTCACTGCCACCCCCAC---ACCTGATTGCCAGGGAGGGT-ACATTCTAGGACAGTAGACAGTAGACACACACCAG-GGCCCTGGGAGCCACGTTCCTAAGGGCCTCTTGCTTTAAAGGACAAATGCATCCTTTCCACAAGGGCTGTCTACCAGGGGATGTCTGACATCTCCTATCACTCAACTCCAGCCCTGGACTAGCATCTTGCTCCAGAAAGATTATATAAGACTTGTTAATGAACACAGGACTGAGGCCAGA-AATGCCGAAGTTCTGCAGAAACTGACAGCTCTTGGTCACTACCAAGCAGCCTGTAAGAACCTAAAAACAAATGGCAAGCAAGGCACTCAgcagagattgcttcttgactacccaatagctaacccctcc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35024836 591 + 104879549 taaaaagtgtaaaaacccacgctcagctcacagaccatttaaaaataggcag-tggtccagactcggtccacggccaatagttt-ccaacccttgtcccagctgatagtgacagtgggccatg----aactacagtgtgatccactgaactccctaggcctaaggtcTTCATT------GTAAAAAGGGAAGAGAGGGAGGG----AGGCAGCCAGCTGCCCTACACTCTGTTGCTCACTGCCACCCCCAT---ACCTGATTGCCAGGGAGGGC-ACATTTTAG-------GACAGTAGACACACACCAG-GGCCCTGGGAGCCACGTTCCTAAGGTCCTCTTGCTTTAAAGGACAAATGCATCATTTCCACAAGGGCTGTCTACCAGGGGATGTCTGACATCTCCTATCACTCAACTCCAGCCCTGGACTAGCATCTTGCCCCAGAAGGATTATATAAGACTTGTTAATCAACACAGGACTGAGGCCAGA-AATGCCGAAGTTCTGTAGAAACCGACAGCTCTTGGTCACTACCAAGCAGCCTGTAAGAACCTAAAAACAAATGGCAAGCAAGGCACTCAgcagagattgcttcttgcctacccaatagct-atccctcc i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73817695 592 - 130959383 taaaaagtgtaaaaacccatgtttagctcacagaccatctaaaaataggcag-tggtccagactcagtccatggccaatagtttgccaacccttgTCCCAGCTGATAGTGACAGGGGGCCATG----AACTACAGTGTGATCCACTCAACTCCCTAGGCCTAAGGTCTTCATT------GTGAAAAGGGAAGGGAGGGAGGG----AGGCAGCCAGCTGCCCTACACTCTGCTGCTCACTGCCACCCCCAT---ACCTGATTGCCAGGGAGGGT-ATGTTCTAG-------GACAGTAGACACACACCAG-GGCCCTGGGTGCCATGTTCCTAAGGACCTCTTGCTTTAAAGGACAAATGCATCCTTTCCACAAGGACTGTTTACTAGGGGATGTCTGACATCTCCTATTACTCAACTCCAGCCCAGGATTAGCATCTTGCCCCAGAAGTATCATATAAGAGTTGTTAATGAACAGAGGACTGAGGCCAGA-AATGCAGACGTTCTGCAGAAACCGATGGCTCTTGGTCACTACCAAGCAGCCTGTAATAACCTAAAAACAAATGGCAAGCAAGGCACTCAgcagagattgctttctgcctacccaatagcc-atccctcc i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75379533 592 - 133195287 taaaaagtgtaaaaacccatgtttagctcacagaccatctaaaaataggcag-tggtccagactcagtccatggccaatagtttgccaacccttgTCCCAGCTGATAGTGACAGGGGGCCATG----AACTACAGTGTGATCCACTCAACTCCCTAGGCCTAAGGTCTTCATT------GTGAAAagggaagggagggaggg----aggcagCCAGCTGCCCTACATTCTGCTGCTCACTGCCACCCCCAT---ACCTGATTGCCAGGGAGGGT-ATGTTCTAG-------GACAGTAGACACACACCAG-GGCCCTGGGTGCCACGTTCCTAAGGACCTCTTGCTTTAAAGGACAAATGCATCCTTTCCACAAGGACTGTTTACTAGGGGATGTCTGACATCTCCTATTACTCAACTCCAGCCCAGGATTAGCATCTTGCCCCAGAAGTATCATATAAGAGTTGTTAATGAACAGAGGACTGAGGCCAGA-AATGCAGACGTTCTGCAGAAACCGATGGCTCTTGGTCACTACCAAGCAGCCTGTAATAACCTAAAAACAAATGGCAAGCAAGGCACTCAgcagagattgctttctgcctacccaatagcc-atccctcc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73244301 592 - 125196307 taaaaagtgtaaaaaccCATGTTTAGCTCACAGACCATCTAAAAATAGGCAG-TGGTCCAGACTCAGTCCATGGCCgatagtttgccaacccttgtCCCAGCTGATAGTGACAGGGGGCCATG----AACTACAGTGTGATCCACTCAACTCCCTAGGCCTAAGGTCTTCATT------gtgaaaagggaagggagggaggg----aggcagccagCTGCCCTACACTCTGCTGCTCACTGCCACCCCCAT---ACCTGATTGCCAGGGAGGGT-ATGTTCTAG-------GACAGTAGACACACACCAG-GGCCCTGGGTGCCACGTTCCTAAGGACCTCTTGCTTTAAAGGACAAATGCATCCTTTCCACAAGGACTGTTTACTAGGGGATGTCTGACATCTCCTATTACTCAACTCCAGCCCAGGATTAGCATCTTGCCCCAGAAGTATCATATAAGAGTTGTTAATGAACAGAGGACTGAGGCCAGA-AATGCAGATGTTCTGCAGAAACCGATGGCTCTTGGTCACTACCAAGCAGCCTGTAATAACCTAAAAACAAATGGCAAGCAAGGCACTCAGCAGAGATTGCTTTTTGCCTACCCAATAGCC-ATCCCTCC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72076193 588 - 125710982 ttaaaagtgtaaaaacccatgtttagctcacagaccatctaaaaataggcag-tggtccagactcagtccatggccgatagtttgccaacccttgTCCCGGCTGATAGTGACA-GGGGCCATG----AACTACAGTGTGATCCACTCAACTCCCTAGGCCTAAGGTCTTCATT------GTGAAAagggaagggagggaggg----aggcagCCAGCTGCCCTACACTCTGCTGCTCACTGCCACCCCCAT---ACCTGATTG-CAGGGAGGGT-ATGTTCTAG-------GACAGTAG--ACACACCAG-GGCCCTGGGTGCCACATTCCTAAGGACCTCTTGCTTTAAAGGACAAATGCATCCTTTCCACAAGGACTGTTTACCAGGGGATGTCTGACATCTCCTATTACTCAACTCCAGCCCAGGATTAGCATCTTGCCCCAGAAGTATCATGTAAGAGTTGTTAATGAACAGAGGACTGAGGCCAGA-AATGCAGATGTTCTGCAGAAACCGATGGCCCTTGGTCATTACCAAGCAGCCTGTAATAACCTAAAAACAAATGGCAAGCAAGGCACTCAgcagagattgctttttgcctacccaatagcc-atccctcc i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75533413 596 - 121768101 taaaaagtataaaaacccatgcttagctcgaagaccgtttaaaaataggcagttgggccagacttggtctatggccaatagtttgccaacccttgTCCTAAATGACAGTGACAGTGAACCATGTAATCACTACAGTGTGATCCACTCAATTCCCTAGGCCTAAGGTCTTCACT------GTAAAAAGGGAAGGGAGGGAGGGAGGCAGGCAGCCAGCTGCCATACACTCTGCTGCTTACTG-CACCCCCAC---ACCTGACTGCCAGGGAGGGC-AGATTCTAG-------GACGGGAGACACACACCAG-GGGCCTGGGA-CCACGTTCATAAGGGCCTCTTGCTTTGCAGGACAAATGCAACCTTTCCACAAGGGCTGTC-ACAAGAAGAT-TATGCCATCTCCTGACACTCAACTCCAGCCCTGGACTAGCATCCTGCCCCAGAAGGATCATAGAAGAGTTGTTAATGAACACAGGATTGACGCTAGA-AATGCCAAAGTTCTGCAGAAACCGATGGCCCTTGGTCACAACCAAGCAG-CTGTAATAACCTAAAAACAAATGGCAAGCAATGCACTtgccagagactgctttttgcctaccccatagct-atccttcc i calJac3.chr12 I 325 C 0 s canFam3.chr4 27698852 582 + 88276631 --aaacatgtaaacatccattcttagctc-caggccatatagaaacagat-g-tggac----------ctactggctggggtttgcc-TTCTGTGTCCTGACAG--AGTGACAATGGGCCCCG----AACGAGGGTGGGGTACACTCAACTCCCAGCGCC-AGGGCCTTAATTTAAACAATAAAAATGGGAGC-AGGGAAGG----AAGAAACCAGCTGTCCGATCATCAGCT-CTTGTTGCCCACCCTTTGTCGCCTGCCTGCCTGGGAGGGCAACATTCTAG-------AATGCTGGACACACACCAGCAACCCCATGAGCAGCGGTCACAAGAGCCTCCTGCTTTACAGGACAAAAGTACCCACTCCACAAGGGCAATCTGCCAGGGGACGTCTAATACTCCCTAATATGCCACTCCGGCCCTGGTGCAGTGCCTAGCCCGGGGAG-ATCTTGTAAGAATCATTCGTGGACACAGGAGTGAAGCCAGAGAAGGCCAAAGATCTGCAGAGACTGGTGGCTCTTGGTCATCCCCAAACAGCCCATAATAACCCCAGAAGAAACGAGAAGCAACGCGTTGTGCAGAGACTGCTTC-TGCCCATCCAGTACCC-ATCCTTCC i canFam3.chr4 C 0 I 19 e mm10.chr14 24139753 4475 + 124902244 I a score=929856.000000 s hg38.chr10_KI270825v1_alt 43598 320 + 188315 attcttcctcagtaactgaacctcttactgaggccagcaatgcacccagctaaaacatgccttttcttttt-----a------attattttttgagacaggatcttgctctgtcacccaggctggagtacggtggcgtgatcttggctcactgc-acctccgcctcctgggttcaagggattctcctgcctcagcctcccaagtagctgggattacaggtgcatgccaccacacctggctaatttttgtatttttaatagagacagggtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatccacccacctcagcct s panTro4.chr10 76414223 325 + 133524379 attcttccttagtaactgaacctcttactgaggccagcaatgcacccagctaaaacatgccttttctttttgtttta------attattttttgagacaggatcttgctctgtcacccaggctggagtacggtggtgtgatcttggcttactgc-acctccgcctcctgggttcaagcagttctcctgcctcagcctcccaagtagctgggattacaggtgcctgccaccacacctggctaatttttgtatttttaatagagacagggtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatccacccacctcagcct i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76082356 325 - 133410057 attcttccttagtaactgaacctcttactgaggccagcaatgcacccagctaaaacatgccttttcttttggtttta------attattttttgagacaggatcttgctctgtcacccaggctggagtacggtggcgcgatcttggctcactgc-acctccgcctcctgggttcaagcgattctcctgcctcagcctcccaagtagctgggattacaggtgcatgccaccacacctggcgaatttttgtatttttagtagagacagggtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatccacccacctcagcct i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35025427 325 + 104879549 attcttccttagtaactgaacctcttactgaggccagcaatgcacccagctaaaacatgccttttctttttgtttta------attattttttgagacaagatcttgctctgtcacccaggctggagtacagtggtgcgatcttggctcactgc-acctccacctcctgggttcaagcgattctcctgcctcagcctcccaagtagctgggattacaagtgcatgccaccacacctggctaatttttgtatttttagtagagacagggtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatccacccgcctcagcct i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73818287 329 - 130959383 attcttccttagtaactgaacctcgtactgaggccagcaatacacccagctgaaacatgtcttttcctcttgttttaat---tattattttttgagacaggatcttgctctgtcacccaggctagagtacaatggaacgatcttggctcactgcaacctccgcctcctgggttcaggcgattttcctgcctcagtctcccaagtagctgggattacaggcgcatgccaccacacctggctaatttttgtatttttagtagagacagggtttcaccacgttggccaggctggtctcgaactcccgacttcaggtgatccacccaccacggcct i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75380125 329 - 133195287 attcttccttagtaactgaacctcgtactgaggccagcaatacacccagctgaaacatgccttttcttcttgttttaat---tattattttttgagacaggatcttgctctgtcacccaggctggagtacaatggaacgatcttggctcactgcaacctccgcctcctgggttcaggcgattttcctgcctcagtctcccaagtagctgggattacaggcgcatgccaccacacctggctaatttttgtatttttagtagagacagggtttcaccacgttggccaggctggtctcgaactcccgacttcaggtgatccacccacctcggcct i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73244893 329 - 125196307 ATTCTTCCTTAGTAACTGAACCTCGTACTGAGGCCAGCAATGCACCCAACTGAAACAtgccttttcttcttgttttaat---tattattttttgagacaggatcttgctctgtcacccaggctggagtacaatggaacgatcttggctcactgcaacctccgcctcctgggttcaggcgattttcctgcctcagtctcccaagtagctgggattacaggcgcatgccaccacacctggctaatttttgtatttttagtagagacagggtttcaccacgttggccaggctggtctcgaactcccgacttcaggtgatccacccacctcggcct i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72076781 329 - 125710982 attcttccttagtaactgaacctcgtactgaagccagcaatgcacgcagctaaaacatgccttttcttcttgttttaat---tattattttttgagacaggatcttgctctgtcacccaggctggagtacaatggagcgatcttggctcactgcaacctccgcctcctgggttcaggcgattttcctgcctcagcctcccaagtagctgggattacaggcacatgccaccacacctggctaatttttgtatttttagtagagacagggtttcaccacattggccaggctggtctcgaactcctgacttcaggtgatccacccacctcagcct i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75534009 281 - 121768101 atttttccttagtaactg-acctcttactgagcccagtaatgcacccagataaaacatgccttttctttttgttttattttatattattttttgagatggactcttgctctgtcacccaggctggagtacagtggtgcaatctcggctcactgcaaccttcgcctcctaggttcgagtgattctcct--------------------------------------------------gctaatttttgtatttttcgtagagacggggtttcaccatgttggccaggctggtctcaaactcttgacctcaggtgatccacctgcctctgcct i calJac3.chr12 C 0 C 0 e canFam3.chr4 27699434 19 + 88276631 I e mm10.chr14 24139753 4475 + 124902244 I a score=1066326.000000 s hg38.chr10_KI270825v1_alt 43918 344 + 188315 cccaaagtgctgggattaaacgtgtgagccactgtgcctggccaaaacatgcctttttgacctctcttgcacatgcaagtggacaatgagatgcaagttgaagtcacaggttagggcttccagat-agctgctgaaagaggcacgctcagctgaggcacacttctgccttaccactccttccttc-ctcctgctgcctgaaacagggacatgatggctgcagctGCATTGACAGGCGGTGACTGGGAGGATGGAAGCCACACCCCATAGATGT--GGCTCTGAAGATGGCAGCA-CCCC-CCGACCAAGCCGAACACACACCTTCAGACTTGCGCACAAAAGCAAAGTAA s panTro4.chr10 76414548 344 + 133524379 cccaaagtgctgggattaaacgtgtgagccactgtgcctggccaaaacatgcctttttgacctctcttgcacatgcaagtggacaatgagatgcaagttgaagtcacaggttagggcttccagat-agctgctgaaagaggcacgctcagctgaggcacacttctgccttaccactccttccttc-ctcctgctgcctgaaacagggacatgatggctgcagctgcattgacaggcggtgactgggaggatggaagccacACCCCATAGATGT--GGCTCTGAAGATGGCAGCA-CCCC-CCGACCAAGCCGAACACACACCTTCAGACTTGTGCACAAAAGCAAAGTAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76082681 344 - 133410057 cccaaagtgctgggattaaacgtgtgagctgctgtgcccggccaaaacatgcctttttgacctctcttgcacatgcaagtggacagtgagatgtaagttgaagtcacaggttagggcttccagat-agctgctgaaagaggcacactcagctgaggcacacttctgccttaccaccccttccttc-ctcctgctgcctgaaacagggacatgatggctgcagctgcactgacaggcggtgaccggggggatggaagccacaccccatagatgt--ggctctgaagatggcagca-cccc-ccgaccaagccgaacacacaccttcagacttgtgcacaaaagcaaagtaa i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35025752 345 + 104879549 cccaaagtgctgggattaaacgcgtgagccactgtgcccagccaaaacatgcctttttgacctctcttgcacatgcaagtggacaatgagatgtaagtttaagtcacaggttagggcttccagat-agctgctgaaagaggcatgctcagctgaggcacacttctgccttaccaccccttccttc-ctcctgctgcctgaaacagggacgtgatggctgcagctgcactgacaggtggtgaccgggcagatggaagccacACCCCATAGATGT--GGCTCTGAAGATGGCAGCACCCCC-CCGACCAAGCCGAACACACACTCTCAGACTTGTGCACAAAAGCAAAGAAA i nomLeu3.chr18 C 0 I 307 s rheMac3.chr9 73818616 333 - 130959383 cccgaagtgctgggattaaaggtgtgagctactgtgcctggccaaaacatgcctttttgacctctcttgcacatgcgagtggacaatgagatgtaagtcgaagtcacaggttagggcttccagac-agctgctaaaagaggcacgctcagctgaggcacacttctgccttacc---ccttccttc-ctcccgctgcctgaaacagggatgtgctg------gttgcactgacaggcagtgaccgggaggatagaagccacACCCCATAGATGT--GGCTCTGAAGATGGCAGCA-CCCC-CA-ACCAAGCCGGACACACACCTTCAGACTTGTGCAC-AATGCAAAGTAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75380454 333 - 133195287 cccgaagtgctgggattaaaggtgtgagctactgtgcctggccaaaacatgcctttttgacctctcttgcacatgcgagtggacaatgagatgtaagtcgaagtcacaggttagggcttccagac-agctgctgaaagaggcacgctcagctgaggcacacttctgccttacc---ccttccttc-ctcccgctgcctgaaacagggatgtgctg------gttgcactgacaggcagtgaccgggaggatagaagccacACCCCATAGATGT--GGCTCTGAAGATGGCAGCA-CCCC-CA-ACCAAGCCGGACACACACCTTCAGACTTGTGCAC-AATGCAAAGTAA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73245222 333 - 125196307 cccgaagtgctgggattaaaggtgtgagctactgtgcctggccaaaacatgCCTTTTTGACCTCTCTTGCACATGCGAGTGGACAATGAGATGTAAGTCGAAGTCACAGGTTAGGGCTTCCAGAT-AGCTGCTGAAAGAGGCACGCTCAGCTGAGGCACACTTCTGTCTtacc---ccttccttc-ctcctgctgCCTGAAACAGGGATGTGCTG------GTTGCACTGACAGGCAGTGACCGGGAGGATAGAAGCCACACCCCATAGATGT--GGCTCTGAAGATGGCAGCA-CCCC-CC-GCCAAGCCAGACACACACCTTCAGACTTGTGCAC-AATGCAAAGTAA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72077110 334 - 125710982 cccgaagtgctgggattaaaggtgtgagctactgtgcctggccaaaacatgcctttttgacctctcttgcacatgcaagtggacaatgagatgtaagtcgaagtcacaggttagggcttccagat-agctgctgaaagaggtacgctcagctgaggcacacttctgccttacc---ccttccttc-ctcctgctgcctgaaacagggatgtgctg------gttgcactgataggcggtgaccgggaggatggaagccacACCCCATAGATGT--GGCTCTGAAGATGGCAGCA-CCCC-CCGACCAAGCCGGACACACACCTTCAGACTTGTACAC-AATGCAAAGTAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75534290 341 - 121768101 cccaaagtgctgggattacaggtgtgagccactgcgcccggccaaaacatgcctttttgacctctcttgaacatgcaagtggacaatgagatgtaagt-ggagtcacaggttagggcttccagat-agctgctcaaagaggcacgttcagctgaggcacacttctgccttacc---ccttcttcc-ctcctgttgcctaaaacagggatgtgatggctgcagctgcactgacaggtggtgactgggaggatggaggccacatcccatggatgt--ggctctgaagatgatagca-ccccaccgaccaagccggacatacacctccagacttgtgcacaaaagcaaagtaa i calJac3.chr12 C 0 C 0 s canFam3.chr4 27699453 287 + 88276631 CCTAGGGTACTGAGGGCAG----------CACTGCGCC-AGCTGAAAC-----------------CCTGCAGATGCCAGtggccagtgagatgtgaggagatgtcgcagggtgggactcccaagtaagtggtttaaagaggcacactcaact---gcacact------ttgcc---ccatcctcctttcctgctgactgaa--tatgatctgatagttggagctgcaatgtcatgtgctgacc------atggaagccgtgccctgcagacggcagCCCCTGAGGACAACGAC--CACC-CCGATCGAGACAA------------GGACTCCTATGCAAAAGCAGGGTGG i canFam3.chr4 I 19 C 0 e mm10.chr14 24139753 4475 + 124902244 I a score=44036.000000 s hg38.chr10_KI270825v1_alt 44262 15 + 188315 GACTCTCTTTTGTTT s panTro4.chr10 76414892 15 + 133524379 GACTCTCTTTTGTTT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76083025 15 - 133410057 gactctcttttgttt i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35026404 15 + 104879549 GACTCTCTTTTCTTT i nomLeu3.chr18 I 307 C 0 s rheMac3.chr9 73818949 15 - 130959383 GCCTCTCTTTTCTTT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75380787 15 - 133195287 GCCTCTCTTTTCTTT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73245555 15 - 125196307 GCCTCTCTTTTCTTT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72077444 15 - 125710982 GCCTCCCTTTTCTTT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75534631 15 - 121768101 gcctctattttgttt i calJac3.chr12 C 0 C 0 s canFam3.chr4 27699740 15 + 88276631 ACCTCTATCTTGCCT i canFam3.chr4 C 0 C 0 e mm10.chr14 24139753 4475 + 124902244 I a score=1350484.000000 s hg38.chr10_KI270825v1_alt 44277 315 + 188315 AAGTCCCTGTTGTGGAGCTCCTGGATCCACAGCAAGCCCCATCTGGAGAGCCCACTGGAAAATGAGCTCAGCCACTTGCCTTCAAAGAGTGGAATGGAGTCACTGGAAAAGGCATCCAAGGCGAGCAGGTCTTTCCCGTCCTTGGACCCGCTGCGTTTGTGCTTGTGTTTCCTCCGAAAAAAGGACCGGCGTGCAGCCGCTGACAGCGTCTTTGTGGCGCTATTGTCATCTTTGACTTCAGACATGCTGAGCCTCCTGGAGAATTCTTGGTCCATCCTGTGG-CACAGGG----GACAATG---CTGGGCAGGGCC-----ATCGAGA s panTro4.chr10 76414907 315 + 133524379 AAGTCCCTGTTGTGGAGCTCCTGGATCCACAGCAAGCCCCATCTGGAGAGCCCACTGGAAAATGAGCTCAGCCACTTGCCTTCAAAGAGTGGAATGGAGTCACTGGAAAAGGCATCCAAGGCGAGCAGGTCTTTCCCGTCCTTGGACCCGCTGCGTTTGTGCTTGTGTTTCCTCCGAAAAAAGGACCGGCGTGCAGCTGCTGACAGCGTCTTTGTGGCGCTATTGTCATCTTTGACTTCAGACATGCTGAGCCTCCTGGAGAATTCTTGGTCCATCCTGTGG-CACAGGG----GACAATG---CTGGGCAGGGCC-----ATCGAGA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76083040 315 - 133410057 aagtccctgttgtGGAGCTCCTGGATCCACAGCAAGCCCCATCTGGAGAGCCCACTGGAAAATGAGCTCAGCCACTTGCCTTCAAAGAGTGGAATGGAGTCATTGGAAAAGGCATCCAAGGCGAGCAGGTCTTTCCCGTCCTTGGACCCGCTGCGTTTGTGCTTGTGTTTCCTCCGAAAAAAGGACCGGCGTGCAGCCGCTGACAGCGTCTTTGTGGCGCTATTGTCATCTTTGACTTCAGACATGCTGAGCCTCCTGGAGAATTCTTGGTCCATCCTGTGG-CACAGGG----GACAATG---CTGGGCAGGGCC-----ATCGAGA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35026419 315 + 104879549 AAGTCCCTGTTGTGGAGCTCCTGGATCCACAGCAAACCCCATCTGGAGAGCTCACTGGAAAATGAGCTCAGCCACTTGCCTTCAAAGAGTGGAATGGAGTCATTGGAAAAGGCATCCAAGGCGAGCAGGTCTTTCCCATCCTTGGACCCGCTGCGTTTGTGCTTGTGTTTCCTCCGAAAAAAGGACCGGCGTGCAGCCGCTGACAGCGTCTTTGTGGCGCTATTGTCATCTTTGACTTCAGACATGCTGAGCCTCCTGGAGAATTCTTGGTCCATCCTGTGG-CACAGGG----GACAATG---CTGGGCAGGGCT-----ATCGAGA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73818964 315 - 130959383 AAGTCCCAGTTGTGGAGCTCCTGGATCCACAGCAAACCCCATCTGGAGAGCCCACTGGAAAATGAGCTCGGCCACTTGCCTTCAAAGAGTGGAATGGAGTCATTGGAAAAGGCATCCAAGGAGAGTAGGTCTTTCCCATCCTTGGATCCGCTGCGTTTGTGCTTGTGTTTCCTCCGAAAAAAGGACCGGCGTGCAGCCGCCGACAGTGTCTTTGTGGCGCTATTATCGTCTTTGACTTCAGACATGCTGAGCCTCCTGGAGAATTCTTGGTCCATCCTGTGG-CACAGGG----GACAATG---CTGGGCAGGGCC-----ATCGAGA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75380802 315 - 133195287 AAGTCCCAGTTGTGGAGCTCCTGGATCCACAGCAAACCCCATCTGGAGAGCCCACTGGAAAATGAGCTCGGCCACTTGCCTTCAAAGAGTGGAATGGAGTCATTGGAAAAGGCATCCAAGGAGAGTAGGTCTTTCCCATCCTTGGATCCGCTGCGTTTGTGCTTGTGTTTCCTCCGAAAAAAGGACCGGCGTGCAGCCGCCGACAGTGTCTTTGTGGCGCTATTATCATCTTTGACTTCAGACATGCTGAGCCTCCTGGAGAATTCTTGGTCCATCCTGTGG-CACAGGG----GACAATG---CTGGGCAGGGCC-----ATCGAGA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73245570 315 - 125196307 AAGTCCCAGTTGTGGAGCTCCTGGATCCACAGCAAACCCCATCTGGAGAGCCCACTGGAAAATGAGCTCGGCCACTTGCCTTCAAAGAGTGGAATGGAGTCATTGGAAAAGGCATCCAAGGAGAGTAGGTCTTTCCCATCCTTGGATCCGCTGCGTTTGTGCTTGTGTTTCCTCCGAAAAAAGGACCGGCGTGCAGCCGCCGACAGTGTCTTTGTGGCGCTATTATCATCTTTGACTTCAGACATGCTGAGCCTCCTGGAGAATTCTTGGTCCATCCTGTGG-CACAGGG----GACAATG---CTGGGCAGGGCC-----ATCGAGA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72077459 315 - 125710982 AAGTCCCAGTTGTAGAGCTCCTGGATCCACCGCAAACCCCATCTGGAGAGCCCACTGGAAAATGAGCTCGGCCACTTGCCTTCAAAGAGTGGAATGGAGTCATTGGAAAAGGCATCCAAGGAGAGCAGGTCTTTCCCATCCTTGGATCCGCTGCGTTTGTGCTTGTGTTTCCTCCGAAAAAAGGACCGGCGTGCAGCCGCCGACAGTGTCTTTGTGGTACTATTGTCATCTTTGACTTCAGACATGCTGAGCCTCCTGGAGAATTCTTGGTCCATCCTGTGG-CACAGGG----GACAATG---CTGGGCAGGGCC-----ATCGAGA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75534646 306 - 121768101 aagtccctgttgtGGAGCTCCTGGATCCACAGCAAACCACA---------CCCACTGGAAAACGAGCTCAGCCACTTGCCTTCAAAGAGTGGAATGGAATCACTGGAAAAGGCTTCCAAGGCCAGCAGGTCTTTCCCGTCCTTGGACCCACTGCGTTTGTGCTTATGTTTCCTCCGAAAAAACGACCGGCGTGCAGCCGCTGACAGGGTCTTTGTGGCACTATTGTCATCTTTGACTTCAGACATGCTGAGCCTCCTGGAGAATTCTTGGTCCATCCTGTGG-CACAGTA----GACAATG---CTGGGCAGGGCC-----ACTGAGA i calJac3.chr12 C 0 C 0 s mm10.chr14 24144228 310 + 124902244 AAGTCTCA-TGGTGAAGCT--TTGATACCCTACCACCCGCACCCCTGGAGTCCATTGG--AATGAACCCAG-CACTTGCCTTCAAAGAGAGGAATGGAGTCGTTGGAAAAGGTGTCCAGGGCGAGCAGGTCCTTGCCGTCTTTGGACCCACTGCGTTTATGTTTATGTTTCCTTCGGAAGAAGGAACGGCGCGCAGCTGCTGACAGCGTCT---TGGCTGTGTTGTCATCTTTGACCTCAGACATGCTGAGCCTCCGGGAGAACTCTTGGTCCATCCTGCAGCCACAGAGAAATGACAATG---CTGGG-AGGACC-----ATGGGGA i mm10.chr14 I 4475 I 1419 s canFam3.chr4 27699755 308 + 88276631 AAG----------------CCAGTGTCAATGGCAAACCTAATTCTGAGAGCCGCTGGAAAAGTGAGCTCAGCCACTTGCCTTCAAAGAGTGGAATGGTGTCGTTGGAAAAGGTGTCCAGGGCAAGGAGGTCTTTCCCATCTTTGGACCCGCTGCGTTTGTGCTTATGCTTCCTTCGAAAGAAGGATCTGCGTGCAGCCGCCGACAGTGTCTTTGCGGCGTTGTTGTCATCTTTGACCTCAGACATGCTGAGTCTCCTGGAGAATTCTTGGTCCATCCTGTGGTCACAGGG----AAGGGTGGTCCTGAGAAGGGCCTAGTGATTGAGC i canFam3.chr4 C 0 C 0 a score=1947122.000000 s hg38.chr10_KI270825v1_alt 44592 623 + 188315 CCCTGCTGCCCTGCCCTTCCTGCCCTTCCTGGTGAGAAAAGCAAAGGTGGGCCA-GACACTGGGCT-CCCCCC-ACACTCCTTGGCAGGTCTCAAGGCTACATCTCCT-CCCACGCCCCTG-GGAACCCTCGGTAC--ATGCTGCGGGGGTGACACAAACACCAGCACCAGGGCAAGCTCTCAGAGCAGGCGATTTTTTCTACTACAGCATATTCAGCTCGGTGTCAAAAGGAAC-TGCTAGGACAGCCTTCAATTGGTGACATGACGAGTTACGCTTCCTgccatagaagggaaatgatgcagggatgcaggctg-----------cctcgaaaaca---tgctcagtgacaggagccagatgaaaggccacactatgcaatcccaaccacacagaagtccag-acagggagacccatgggtatcaaaagtaaagtagtggctgcctagggctgagggctgggtgggag-gacagtgggataaggggctgacagctaat-gggtctggggtttgtttgaggtgatggaaatgctctaaaatta-actgtagtgg-cggctgcacacacctatcaatatgttgaaaaccactgaatggtacactttgagggagcggcaaggcac----gagtatctccataaatccatttttct s panTro4.chr10 76415222 623 + 133524379 CCCTGCTGCCCTGCCCTTCCTGCCCTTCCTGGTGAGAAAAGCAAAGGTGGGCCA-GACACTGGGCT-CCCCCC-ACACTCCTTGGCAGGTCTCAAGGCTACATCTCCT-CCCACGCCCCTG-GGAACCCTCGGTAC--ATGCTGTGGGGGTGACACAAACACCAGCACCAGGGCAAGCTCTCAGAGCAGGCGATTTTTTCTACTACAGCATATTCAGCTCGGTGTCAAAAGGAAC-TGCTAGGACAGCCTTCAATTGGTGACATGACGAGTTACGCTTCCTgccatagaagggaaatgatgcagggatgcaggctg-----------cctcgaaaaca---tgctcagtgacaggagccagatgaaaggccgcactatgcaatcccaaccacacagaagtccag-acagggagacccatgggtatcaaaagtaaagtagtggctgcctagggctgagggctgggtgggag-gacagtgggataaggggctgacagctaat-gggtctggggtttgtttgaggtgatggaaatgctctaaaatta-actgtagtgg-cagctgcacacacctatgaatatgttgaaaaccactgaatggtacactttgagggagcggcaaggcac----gagtatctccataaatccatttttct i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76083355 623 - 133410057 CCCTGCTGCCCTGCCCTTCCTGCCCTTCCTGGTGAGAAAAGCAAGGGTGGGCCA-GGCACCGGGCT-CCGCCA-ACACTCCTTGGCAGGTCTCAAGGCTACATCTCCT-CCCACGCCCCTG-GGAACCCTCGGTAC--ATGCTGTGGCGGCGACACAAACACCAGCACCAGGGCAAACTCTCAGAGCAGGCGATTTTTTCTACTACAGCATATTCAGCTCGGTGTCAAAAGGAAC-TGCTAGGACAGCCTTCAATTGGTGACATGACAAGTTACGCTTCCTgccatagaagggaaatgatgcagggatgcaggctg-----------ccttgaaaaca---tgctcagtgacaggagccagatgaaaggccacactatgcaatcccatccacacaggagtccag-acagggagacccatgggtatcaaaagtaaagtagtggctgcctagggctgagggctgggtgggag-gacagtgggataaggggctgacagctaat-gggtctggggtttgtttgaggtgatggaaatgctctaaaatta-agtgtagtgg-cggctgcacacacctatgaatatgttgaaaaccactgaatggtacactttgagggagtggcaaggcat----gagtatctccataaatccatttttct i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35026734 620 + 104879549 ACCTGCTGCCCTGCCCTTCCTGCCCTTCCTGGTGAGAAAAGCAAGGGTGGGCCA-GGCACCAGGCTCCCCCCC-ATACTCCTTGGCAGGTCTCAAGGTTACATCTCCT-CCCACGCCCCTG-GGAACCCTCAGTAC--ATGCTGCGGGGGTGACACAAACACCAGCACCAGGGCAAGCTCTCAGAGCAGGCGATTTTTTCTACTACAGCATATTCAGCTCAGTGTCAAAAGGAAC-TGCTAGGACAGCCTTCAATTGGTGACATGACAAGTTACGCTTCCTgccatagaagggaaatgatgcagggatgcaggctg-----------cctcgaaaaca-------cagtgacaggagccagatgaaaggccacactatgcaatcccatccacacaggagtccag-acagggagacccatgggtaccaaaagtaaagtagtggctgcctagggctgagggctgggtgggag-gacagtgggataaggggctgacagctaat-gggtctggggtttgtttgaagtgatggaaatgctctaaaatta-attgtagtgg-cggctgcacacacctatgaatatgttgaaaaccactgaatggtacactttgagggagcagcaaggcat----gagtatctccataaatccatttttct i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73819279 611 - 130959383 CCCTGCTGCCTTACCCTACCCGACCTTCCTGGTGAGAAAAGCAAGGGTGGGCCA-GGCACCAGGCT-CCCCCT-ACACTCCTTGGCAGGTCTCAAGGCTACATCTCCT-CCCATGCCCCTG-GGACCCCTCGGTAC--ATCCTGTGG-GGCGACACGAACACCAGCACCAGG----GCTCTCAGAGCAGGTGATTTTTTCTACTACAGCATATTCAGCTCAGTGTCAAAAAGAAC-TGCTAGCACAGCCTTCACTTGG-----CGACGAGTTACACTTCCTgccatagaagggaaatgatgcagggatgcaggctg-----------cctcgaaaaca---tgctcagtgac--gagccagacaaaaggctacactatgcaatcccatccacacaggagtccag-acagggaaacccgtgggtatcagaagtgaagtagtggctgcctagggctgagggctgggtgggag-gacagtaggataagcggctgacagctaat-gggtctggggtttgtttgaggtgatggaaatgctctaaaatta-actgtggtgg-cggctgcacacacctatgaatatgctgaaaaccactgaatggtacactgtgagggagcagcaaggcgt----aagtatctccataaatccatttttct i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75381117 615 - 133195287 CCCTGCTGCCTTACCCTACCCGACCTTCCTGGTGAGAAAAGCAAGGGTGGGCCA-GGCACCAGGCT-CCCCCT-ACACTCCTTGGCAGGTCTCAAGGCTACATCTCCT-CCCATGCCCCTG-GGACCCCTCGGTAC--ATCCTGTGG-GGCAACACGAACACCAGCACCAGGGCAAGCTCTCAGAGCAGGTGATTTTTTCTACTACAGCATATTCAGCTCAGTGTCAAAAAGAAC-TGCTAGCACAGCCTTCACTTGG-----CGACGAGTTACACTTCCTgccatagaagggaaatgatgcagggatgcaggctg-----------cctcgaaaaca---tgctcagtgac--gagccagacaaaaggctacactatgcaatcccatcctcacaggagtccag-acagggaaacccgtgggtatcagaagtgaagtagtggctgcctagggctgagggctgggtgggag-gacagtaggataagcggctgacagctaat-gggtctggggtttgtttgaggtgatggaaatgctctaaaatta-actgtggtgg-cggctgcacacacctatgaatatgctgaaaaccactgaatggtacactgtgagggagcagcaaggcgt----aagtatctccataaatccatttttct i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73245885 615 - 125196307 CCCTGCTGCCTTACCCTACCCGACCTTCCTGGTGAGAAAAGCAAGGGTGGGCCA-GGCACCAGGCT-CCCCCT-ACACTCCTTGGCAGGTCTCAAGGCTACATCTCCT-CCCATGCCCCTG-GGACCCCTCGGTAC--ATCCTGTGG-AGCGACACGAACACCAGCACCAGGGCAAGCTCTCAGAGCAGGTGATTTTTTCTACTACAGCATATTCAGCTCAGTGTCAAAAAGAAC-TGCTAGGACAGCCTTCACTTGG-----CGACGAGTTACACTTCCTGCCATAGAAGGGAAATGATGCAGGGATGCAGGCTG-----------CCTCGAAAACA---TGCTCAGTGAC--GAGCCAGACGAAAGGTCACACTATGCAATCCCATCCACACAGGAGTCCAG-ACAGGGAAACCCGTGGGTATCAGAAGTGAAGTAGTGGCTGCCTAGGGCTGAGGGCTGGGTGGGAG-GACAGTAGGATAAGCAGCTGACAGCTAAT-GGGTCTGGGGTttgtttgaggtgatggaaatgCTCTAAAATTA-ACTGTGGTGG-CGGCTGCACACACCTATGAATATGCTGAAAACCACTGAATGGTACACTGTGAGGGAGCAGCAAGGCGT----AAGTATCTCCATAAATCCATTTTTCT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72077774 616 - 125710982 CCCTGCTGCCCTACCCTACCCGACCTTCCTGGTGTGAAAAGCAAGGGTGGGCCAGGGCACTGGGCT-CCCCCC-ACACTCCTTGGCAGGTCTCAAGGCTACATCTCCT-CCCACGCCCCTG-GGACCCCTCGGTAC--ATGCTGTGG-GGCGACATGAACACCAGCACCAGGGCAACCTCTCAGAGCAGGTGATTTTTTCTACTACAGCATATTCAGCTCAGTGTCAAAAGGAAC-TGCTAGGACAGCCTTCACTTGG-----TGATGAGTTACACTTCCTgccatagaagggaaatgatgcagggatgcaggctg-----------cctcgaaaaca---tgctcagtgac--gagccagacgaaaggccacactatgcaatcccatccacacaggagtccag-acagggagacccgtgggtatcagaagtgaagtagtggctgcctagggctgagggctgggtgggag-gacagtaagataagcggctgacagctaat-gggtctggggtttgtttgaggtgatggaaatgctctaaaatta-actgtggtgg-cggctgcacacacatgtgaatatgctgaaaaccattgaatggtacactgtgagggagcagcaaggcgt----aagtatctccataaatccatttttct i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75534952 624 - 121768101 CCCTGCTGCCCTACCCTACCTGCCCTTCCTGGTGAGAAAAGCAAGGGTGGGCCA-GGCACCAGGCT-CCCCCCGACATCCCTCGGCAGGTCTCAAGGCCACATCACTT-CCCCTGCCCCCA-GGACCCCTCCGTAC--ATGCTGCAGGGGTGACACACACACCAGCACCAGGGCAAGCTCTCAGAGCAGGCAA--ATTTCTACTGCAGCATGTTCAGCTCAGTGTCAAAAGGAACAGGCTAGGGCAGCCTTCACTTGGTGACATGATAAATTATGCTTCCTgccatagaaggg-aatggtgcagggatgcaggctg-----------cctcgaaaacattatgctcagtgacaggagccagatgaaaggccacactatgcaatcctagctacacagatgtccag-acatggagacccatgagtaccagaagcaaagcagtggctacctacgactgagggctgggtggaag-gacagagggactaggag-tgacagcaaat-gggtctggggtttgtttgaggtgatggaaatgctctaaaatta-actgtggtgg-cggctgcaaacacctatgactatactgaaaaccactgaacggtacattttgagggagcagcaaggtgt----gagtatctctataaatccatttttct i calJac3.chr12 C 0 C 0 s canFam3.chr4 27700063 574 + 88276631 -----ATTTCCCACACACCCCGTCCTGCTCCGCCAG-------------------GACCCCAGACT-CCTCCA-ATGCTCCTCGACAGATCTCTTGGTTACTCCACCCACCCACACCACTGAGGACCCCTTGGTACCACTGTTGTGG------------------------GGGACGCTTGCAGAGCGGAAAAATTT------------GTACTCAGGTGAGTGTCAAATGGAAG-TGCTAAGACAGCCTTCACCTGGTGTCATGACAAGCGGGGCTTCCTgccacaaaaagg-agcgaaacatggatgcacaccgacatggaataaccttgaaaatg-------ctatgccaagcgccagagagcaggct-cagaaggc---cacattcacaggaaagcccagaacagggacatctacaggga-cagaggtagagtcggggctgcctccggtaggagg--gggcaggagagacagaaaggccgatgg--gagagctaacaggggcagggccgcttctgagctgaggagagtgctctgaaatgacacggggatggatggtggcacacagctcggagtacactgaaagccaccgaattggacacttcaggtgaactgcatggtatatgagtgtatctcaataaatctgttaAAAA i canFam3.chr4 C 0 C 0 e mm10.chr14 24144538 1419 + 124902244 I a score=5928016.000000 s hg38.chr10_KI270825v1_alt 45215 1670 + 188315 aaaaCACGTTATGCCTTCTGACCCATCACTGTGCT-CTATACAGCACTGACTCA-----------------CACTAGGAGCAGCTTTTTAGACCAGCACTTTTGGCAAAATGTAGAGAGCAGAAGCTA-AGATAAGAAGCAGAATCCCTCCTCCAGCAGCCCTGGCCCCAGCCCCCTCCCATGGGAC-AGCTCCATGGCTGGTGGCCCTCGGCGACCCCTGCCCCACCCCACCCCAGGCCCGGAGAACACTTACACATATTTGCTGGGAATCTGCCCGCGCTGGATCTTCTGGGCATTCTCGTCCAGCTGCCAAGCCATCCAGGACCCGAACGTGCCCTGGGGTAAGGTGTCATCCACGTAGAGGATGTCGTCCTTCTTAAAGCTCAACTCTTGCTCCACATCTGCCAGCCGGTCGTACAGGGCCCTGGACCACAGCACAGAAGGAACACGATC---AGGCGGCTCT-GGCCACCAAGGACGAACCAGGTGC---CTTCTGTGGCCAGGCCCCTAAGGCTGCCATTCTGCTTTGGGCTGTCTCCAAACT-TGATCAGGAATCGCCGA---------GGGTGGTGATTCTCAAAG-TGGGGAGCCCTGTGTTTTACATAAAGGGGCAAAG--ACTGCCTTTGCTCCCCTAACACTGAG--------------------GGCGCATCCCCATC----AAAGAA---CTCACCAAGATCTGAGGCCATAACTTCCCTTTCCAGGTGGCCTTTCCCAGTTGCCTCCCTCC----TCGAAGCCCAGGCCCGGCCCCTGGTTCCTACAGACTGGAATCTCTCTAGGATGG-AAATATGTCATCTTCTAC------------CC-TAGAGACAGGGAGTTGTACCGC--------------ATCAGTGTTCTCATGCTTTCTGTGATCTTGGATCTTAGGAAATGTGAAGAAAGCTCTGAGCTCCTCCTAGAAA-GCCTGCTGCCATCCCTAAATGCCCACA-GCATTTCATACA---GT-AGTAAGGGCACTGAAGATGCCTGGAAGTCCACACACACTGCAGAGGGATCTGCAAACCTGGCTTGGGGGACACCAGAAAAAGAGGAGCACAGCACACAGGAAAACGGGGCTTGACTGCCTCCAAATTCTCTAGGTCTTAAGCCCT---------AAAGAGGGGGCCC-AGCTGGTTCTTTAAGCCCTAAAG---GGTTGTTCTAAGTCACAATCATCTCAACATAAATAAGCGTGCAGA-TTGAGTGTCAAGGAATGATGATCATGGCCCCAGC-----CTTGGGGGGCAAGAAAC---AGAGAGCCATTCACCAGGAAAAGAGTCTCCAGTGAAAGCCTCTCCTCTGGTTCCAAATCTCCCACCGATTCCCCAGCCACTGGTACCTGATGTAGAAGCTGTCACCAGGCAGGCCCTTGGCCTTCGTGAACTCCTCAGGGCGGTACTGCACCTTCAGGCGGACGCCATCCCTGGGCTTCAGCATCTCCACATAGACTTCCTCCACTGTCTTGTTCCGCACGTCCAGGCTGCCATACTG-CCAGGGATGGGGGTGGATGC-ATCAGA-AGGCAGAAGCCAGGGGGCAGCTTGGGCACCCGAGAGGGGCCAGTGCTGACCATACGGCAGAAATTCAACATCCCTCCTTAACTGAGACTCtggctacctcccctctgcaggaaggactgagtcttcatggtctccccagtctccaggtcctgtgcaTGCTCCCTGGACACCAGGTCCTCTG---CCAAGTGGCTGCCCTGCCCTTGACAGCTTAT-CCAGGAAA s panTro4.chr10 76415845 1670 + 133524379 aaaaCAAGTTATGCCTTCTGACCCATCACTGTGCT-CTATACAGCACTGACTCA-----------------CACTAGGAGCAGCTTTTTAGACCAGCACTTGTGGCAAAATGTAGAGAGCAGAAGCTA-AGATAAGAAGCAGAATCCCTCCTCCAGCAGCCCTGGCCCCAGCCCCCTCCCATGGGAC-AGCTCCATGGCTGGTGGCCCTCGGCGACCCCTGCCCCACCCCACCCCAGGCCCGGAGAACACTTACACATATTTGCTGGGAATCTGCCCGCGCTGGATCTTCTGGGCATTCTCGTCCAGCTGCCAAGCCATCCAGGACCCGAACGTGCCCTGGGGCAAGGTGTCATCCACGTAGAGGATGTCGTCCTTCTTAAAGCTCAACTCATGCTCCACATCTGCCAGCCGGTCGTACAGGGCCCTGGACCACAGCACAGAAGGAACACGATC---AGGCGGCTCT-GGCCACCAAGGACGAACCAGGTGC---CTTCTGTGGCCAGGCCCCTAAGGCTGCCATTCTGCTTTGGGCTGTCTCCAAACT-TGATCAGGAATCGCCGA---------GGGTGGTGATTCTCAAAG-TGGGGAGCCCTGTGTTTTACATAAAGGGGCAAAG--ACTGCCTTTGCTCCCCTAACACTGAG--------------------GGCGCATCCCCATC----AAAGAA---CTCACCAAGATCTGAGGCCATAACTTCCCTTTCCAGGTGGCCTTTCCCAGTTGCCTCCCTCC----TCGAAGCCCAGGCCCGGCCCCTGGTTCCTACAGACTGGAATCTCTCTAGGATGG-AAATATGTCATCTTCTAC------------CC-TAGAGACAGGGAGTTGTACCGC--------------ATCAGTGTTCTCATGCTTTCTGTGATCTTGGATCTTAAGAAATGTGAAGAAAGCTCTGAGCTCCTCCTAGAAA-GCCTGCTGCCATCCCTAAATGCCCACA-GCATTTCATACA---GT-AGTAAGGGCACTGAAGATGCCTGGAAGTCCACACACACTGCAGAGGGATCTGCAAACCTGGCTTGGGGGACACCAGAAAAAGAGGAGCACAGCACACAGGAAAACGGGGCTTGACTGCCTCCAAATTCTCCAGGTCTTAAGCCCT---------AAAGAGGGAGCCC-ATCTGGTTCTTTAAGCCCTAAAG---GGTTGTTCTAAGTCACAATCATCTCAACATAAATAAGCGTGCAGA-TTGAGTGTCAAGGAATGACGATCATGGCCCCAGC-----CTTGGGGGGCAAGAAAC---AGAGAGCCATTCACCAGGAAAAGAGTCTCCAGTGAAAGCCTCTCCTCTGGTTCCAAATCTCCCACCAATTCCCCAGTCACTGGTACCTGATGTAGAAGCTGTCACCAGGCAGGCCCTTGGCCTTCGTGAACTCCTCAGGGCGGTACTGCACCTTCAGGCGGACGCCATCCCTGGGCTTCAGCATCTCCACATAGACTTCCTCCACTGTCTTGTTCCGCACGTCCAGGCTGCCATACTG-CCAGGGATGGGGGTGGATGC-ATCAGA-AGGCAGAAGCCAGGGGGCAGCTTGGGCACCCGAGAGGGGCCAGTGCTGACCATACGGCAGAAATTCAACATCCCTCCTTAACTGAGACTCtggctacctcccctctgcaggaaggactgagtcttcatggtcgccccagtctccaggtcctgtgcaTGCTCCCTGGACACCAGGTCCTCTG---CCAAGTGGCTGCCCTGCCCTTGACAGCTTAT-CCAGGAAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76083978 1670 - 133410057 aaaaCAAATTATGCCTTCTGACCCATCACTGTGCT-CTATACAGCACTGACTCA-----------------CACTAGGAGCAGCTTTTCAGACCAGCACTTTTGGCAAAATGTAGAGAGCAGAAGCTA-AGATAAGAAGCAGAATCCCTCCTCCAGCAGCCCTGGCCCCAGCCCCCTCCCATGGGAC-AGCTCCATGGCTGGTGGCCCTTGGCGACCCCTGCCCCACCCCACCCCAGGCCCGGAGAACACTTACACATATTTGCTGGGAATCTGCCCGCGCTGGATCTTCTGGGCATTCTCGTCCAGCTGCCAAGCCATCCAGGACCCGAACGTGCCCTGGGGCAAGGTGTCATCCACGTAGAGAATGTCATCCTTCTTAAAGCTCAACTCATGCTCCACATCTGCCAGCCGGTCGTATAAGGCCCTGGACCACAGCACAGAAGGAACACGATC---AGGCGGCTCT-GGCCACCAAGCACAAACCAGGTAT---ATTCTGTGGCCAGGCCCCTAAGGCTGCCATTCTGCTTTGGGCTGTCTCCAAACT-TGATCAGGAATTGCCGA---------AGGTGGTGATTCTCAAAG-TGGGGAGCCCTGTGTTTTACATAAAGGGGCAAAG--ACTGCCTTTGCTCCCCTAACACTGAG--------------------GGCGCATCCCCATC----AAAGAA---CTCACCAAGATCTGAGGCCATAACTTCCCTTTCCAGGTGGCCTTTCCCAGTTGCCTCCCTCC----TCGAAGCCCGGGCCCGGCCCCTGGTTCCTACAGACTGGAATCTCTCTAGGATGG-AAATATGTCATCTTCTAC------------CC-TAGAGACAGGGAGTTGTACCGC--------------ATCAGTGTTCTCATGCTTTCTGTGATCTTGAATCTTAGGAAATGTGAAGAAAGCTCTGAGCTCCTCCTAGAAA-GCCTGCTGCCATCCCTAAATGCCCACA-GCATTTCATACA---GT-AGTAAGGGCACTGAAGATGCCTGGAAGTCCACACACACTGCAGAAGGATCTGCAAACCTGGCTTGGGGGACACCAGAAAAAGAGGAGCACAGCACACAGGAAAACAGGGCTCGACTGCCTCCAAATTTTCCAGGACTTAAGCCCT---------AAAGAGGGAGCCC-ATCTGGTTCTTTAAGCCCTAAAG---GGTTGTTTTAAGTCACAATCATCTCACCATAAATAAGCGTGCAGA-TTGAGTGTCAAGGAATGATGATCATGGCCCCAGC-----CTTGGGGGGCAAGAAAC---AGAGAGCCATTCACCAGGAAGAGAGTCTCCAGCGAAACCCTCTCCTCTGGCTCCAAATCTCCCACCGATTCCCCAGCCACTGGTACCTGATGTAGAAGCTGTCACCAGGCAGGCCCTTGGCCTTCGTGAACTCCTCGGGGCGGTACTGCACCTTCAGGCGGACGCCATCCCTGGGCTTCAGCATCTCCACGTAGACTTCCTCCACTGTCTTGTTCCGCACGTCCAGGCTGCCATACTG-CCAGGGATGGGGGTGGATGC-ATCAGA-AGGCAGAAGCCAGGGGGCAGCTTGGGCACCCGAGAGGGGCCAGTGCGGACCATACGGCAGAAATTCAACATCCCTCCTTAACTGAGACTCTGGCTGCCTCCCCTCTGCAGGAAGGACTAAGTCTTCATGGTCTCCCCAGCCTCCAGGTCCCGTGCATGCTCCCTGGACACCAAGTCCTCTG---CCAAGTGGCTGCCCTGCCCTTGACAGCTTAT-CCAGGAAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35027354 1670 + 104879549 aaaaCAAGTTATGCCTTCTGACCCACCACTGTGCT-CTATACAGCACTGACTCA-----------------CACTAGGAGCAGCTTTTTAGACCAGCACTTTTGGCAAAATGTAGAGAGCAGAAGCTA-AGATAAGAAGCAGAATCCCTCCTCCAGCAGCCCTGGCCCCAGCCCCCTCCCATGGGAC-AGCTCCATGGCTGGTGGCCCTCGGCGACCCCTGCCCCACCCCGCCCCAGGCCCGAAGAACACTTACACATATTTGCTGGGAATCTGCCCCCGCTGGATCTTCTGGGCATTCTCGTCTAGCTGCCAAGCCATCCAGGACCCGAACGTGCCCTGGGGCAAGGTGTCATCCACGTAGAGGATGTCATCCTTCTTAAAGCTCAACTCATGCTCCACATCTGCCAGCCGGTCGTACAGGGCCCTGGACCACAGCACAGAAGGAAAACGATC---AGGCGGCTCT-GGCCACCAAGGACGAACCAGGTGC---CTTCTGTGGCCAGGCCCCTAAGGCTGCCATTCTGCTTTGGGCTGTCTCCAAACT-TGATCAGGAATCGCGGA---------GGGTGGTGATTCTCAAAG-TGGGGAGCCCTGTGTTTTACATAAAGGGGCAAAG--ACTGCTTTTGCTCCCCTAACACTGAG--------------------GGCGCATCCCCATC----AAAGAA---GTCACCATGATCTGAGGTCATAACTTCCCTTTCCAGGTGCCCTTTCCCAGTTGCCTCCCTCC----TCAAAGCCCAGGCCCGGCCCCTGGTTCCTACAGACTGGGATCTCTCTAGGATGG-AAATATGTTATCTTCTAC------------CC-TAGAGACAAGGAGTTGTACCGC--------------ATCAGTGTTCTTATGCTTTCTGTGATCTTGGATCTTAGGAAATGTGAAGAAAGCTCTGAGCTCCTCCTAGAAA-GCCTGCTGCCATCCCTAAATGCCCACA-GCATTTCATACA---GT-AGTAAGGGCACTGAAGATGCCTGGAAGTCCACACACACTGCAGAGGGATCTGCAAACCTGGCTTGGGAGACACCAGAAAAAGAGGAGCACAGCACACACGAAAACGGGGCTTGACTGCCTCCAAATTCTCCAGGCCTCAAGCCCT---------AAAGAGGGAGCCC-ATCTGGTTCTTTAAGCCCTAAAG---GGTTGTTCTAAGTCACAATCATCTCACCATAAATAAGCATGCAGA-TTGAGTGTCAAGGAATGATGATCATGGCCCCAGC-----CTTCGGGGGCAAGAAAC---AGAGAGCCATTCACCAGGAAGAGGGTCTCCAGCGAAAGCCTCTTCTCTGGCCCCAAATCTCCCACCAATTCCCCAGCCACTGGTACCTGATGTAGAAGCTGTCACCAGGCAGGCCCTTGGCCTTCGTGAACTCCTCGGGGCGGTACTGCACCTTCAGGCGGATGCCATCCCTGGGCTTCAGCATCTCCACGTAGACTTCCTCCACTGTCTTGTTCCGAACGTCCAGGCTGCCATACTG-CCAGGGATGGGGGTGGATGC-ATCAGA-AGGCAGAAGCCAGGGGGCAGCTTGGGCACCCGAGAGGGGCCAGTGCTGACCATACGGCAGAAATTCAACATCCCTCCTTAACTGAGACTCTGGCTGCCTCCCCTCTGCAGGAAGGGCTGAGTCTTCATGGTCTCCCCAGCCTCCAGGTCCCGTGCATGCTCCCTGGACACCAGGTCCTCTG---CCAAGTGGCTGCCCTGCCCTTGATAGCTTAT-CCAGGAGA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73819890 1663 - 130959383 aaaaCAAGTAACGCCTCCTGACCCACCACTGTGCT-CCATGCAGCACTGACTCA-----------------CACTAGGAGCAGCTTTTTAGACCAGCACTTTTGTCAAAACGTAGAGAGCAGAAGCTA-GGATGAGAAGCAGAATCCCTCCTCCGGCAGCCCTGGCCCCAGCCCCCTCCCATGGGAC-AGCTCCACGGCTGGTGGCCCTCAGCGACCCCTGCCCCACCCAGCCCCAGACCCAGAGAACACGTACACATATTTGCTGGGAATCTGCCCACGCTGGATCTTCTGGGCATTCTCGTCCAGCTGCCAAGCCATCCAGGACCCAAACGTGCCCTGGGGCAAGGTGTCATCCACGTAGAGAATGTCATCCTTCTTAAAGCTCAGCTCATGCTCCACATCTGCCAGCCGGTCGTACAGGGCCCTGGACCACAGCACAGAGGGAACATCATC---AGGCGGCTCT-GGCCACCGAGGACAAACAAGGCGC---CTTCTGTGGCCAGGCCCCTAAGGCTGATATTCTGCTTTGAGCTATCTCCAAACT-TGATCAGGAACCGCCGA----------GGTGGTGATTCTCAAAG-TGGGGAGCCCTGTGTTTTACATAAAGGGACAAAG--ACTGCCTTTGCTCCCCTAACACTGAG--------------------GGCACATCCCCATC--AGAAAGAA---CTCGCCAAGATCTGAGGCCATAACTTCCCTTTCCAGGTGGCCTTTCCCAGTTGCCTCCCTCC----TCGAAGCCCA-----GGCCCCTGGTTCCCACAGACTGGAATCTCCCTAGGATGG-AAACATGTCATCTCCTAC------------CC-TAGAGACAGGGAGTTGTACCGC--------------ATCAGTGTTCTCATGCTTTCTGTGATCTCGGATCTTAGGAAATGAGAAGAAAGCTCTGAGCTCCTCCTAGAAA-GCCTGCTGCCATCCCTAAATGCCCACA-GCATTTCATACA---GT-AGTAAGGGCACTGAAGATGCCTGGAAGTCCACACACACTGCAGAGGGATCTGCAAACCTGGCTTGGGGGACACCAGAAAAAAAGGAGCACAGCACACAGGAAAATGGGGCTTGACTGCCTCCAAATTCTCCAGGCCTTAAGCCCT---------AAA---GGAGCCC-ACCTGTTTCTTTAAGCCCTGAA----GGTTGTTCTAAGTCACAATCATCTCACCATAAATAAGTGTGCAGATTTGAGTGTCAAGGAATGATGATCATGGCCCCAGC-----CTTGTGGGGCAAGAAAC---AGACAGCCATTTACCAGGAAGAGAATCTCCAATGAAAGCCTGTCCTCTGTCCCCAAATCTCCCACTGATTCCCCAGCCACTGGTACCTGATGTAGAAGCTGTCGCCAGGCAGGCCCTTGGCCTTCGTGAACTCCTCGGGGCGGTACTGCACCTTCAGGCGGACGCCATCCCTGGGCTTCAGCATTTCCACGTAGACCTCCTCCACTGTCTTATTCCGCATGTCCAGGCTGCCATACTG-CCAGGGATGGGGGTGGATGT-GTCAGA-AGGCAGAAGCCAGGGGACAGCATGGGCATTCGAGAGGGGCCAGTGCTGACCATATGGCAGAAATTCCACATCCCTCCTTAACTGAGACTCTGCCTGCCTCCCCTCTGCAGAAAGGGCTGAGTCTTCACGGTCTCCCCAGCCTCCAGCTCCCGTGCATGCTCCCTGGACATCAGGTCCTCTG---CCAAGTGGCTGCTCTGCCCTTGACAGCTTAT-CCAGGAAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75381732 1659 - 133195287 aaaaCAAGTAACGCCTCCTGACCCACCACTGTGCT-CCATGCAGCACTGACTCA-----------------CACTAGGAGCAGCTTTTTAGACCAGCACTTTTGTCAAAACGTAGAGAGCAGAAGCTA-GGATGAGAAGCAGAATCCCTCCTCCGGCAGCCCTGGCCCCAGCCCCCTCCCATGGGAC-AGCTCCACGGCTGGTGGCCCTCAGCGACCCCTGCCCCACCCGGCCCCAGACCCAGAGAACACTTACACATATTTGCTGGGAATCTGCCCACGCTGGATCTTCTGGGCATTCTCGTCCAGCTGCCAAGCCATCCAGGACCCAAACGTGCCCTGGGGCAAGGTGTCATCCACGTAGAGAATGTCATCCTTCTTAAAGCTCAGCTCATGCTCCACATCTGCCAGCCGGTCGTACAGGGCCCTGGACCACAGCACAGAGGGAACATGATC---AGGCGGCTCT-GGCCACCGAGGACAAACAAGGTGC---CTTCTGTGGCCAGGCCCCTAAGGCTGATATTCTGCTTTGAGCTATCTCCAAACT-TGATCAGGAACCGCCGA----------GGTGGTGATTCTCAAAG-TGGGGAGCCCTGTGTTTTACATAAAGGGACAAAG--ACTGCCTTTGCTCCCCTAACACTGAG--------------------GGCACATCCCCATC--AGAAAGAA---CTCGCCAAGATCTGAGGCCATAACTTCCCTTTCCAGGTGGCCTTTCCCAGTTGCCTCCCTCC----TCGAAGCCCA-----GGCCCCTGGTTCCCACAGACTGGAATCTCCCTAGGATGG-AAACATGTCATCTCCTAC------------CC-TAGAGACAGGGAGTTGTACCGC--------------ATCAGTGTTCTCATGCTTTCTGTGATCTCGGATCTTAGGAAATGAGAAGAAAGCTCTGAGCTCCTCCTAGAAA-GCCTGCTGCCATCCCTAAATGCCCACA-GCATTTCATACA---GT-AGTAAGGGCACTGAAGATGCCTGGAAGTCCACACACACTGCAGAGGGATCTGCAAACCTGGCTTGGGGGACACCAGAAAAAAAGGAGCACAGCACACAGGAAAATGGGGCTTGACTGCCTCCAAATTCTCCAGGCCTTAAGCCCT---------AAA---GGAGCCC-ACCTG----TTTAAGCCCTAAA----GGTTGTTCTAAGTCACAATCATCTCACCATAAATAAGTGTGCAGATTTGAGTGTCAAGGAATGATGATCATGGCCCCAGC-----CTTGTGGGGCAAGAAAC---AGACAGCCATTTACCAGGAAGAGAATCTCCAATGAAAGCCTGTCCTCTGTCCCCAAATCTCCCACTGATTCCCCAGCCACTGGTACCTGATGTAGAAGCTGTCGCCAGGCAGGCCCTTGGCCTTCGTGAACTCCTCGGGGCGGTACTGCACCTTCAGGCGGACGCCATCCCTGGGCTTCAGCATTTCCACGTAGACCTCCTCCACTGTCTTATTCCGCATGTCCAGGCTGCCATACTG-CCAGGGATGGGGGTGGATGT-GTCAGA-AGGCAGAAGCCAGGGGACAGCATGGGCATTCGAGAGGGGCCAGTGCTGACCATATGGCAGAAATTCCACATCCCTCCTTAACTGAGACTCTGCCTGCCTCCCCTCTGCAGAAAGGGCTGAGTCTTCACGGTCTCCCCAGCCTCCAGCTCCCGTGCATGCTCCCTGGACATCAGGTCCTCTG---CCAAGTGGCTGCTCTGCCCTTGACAGCTTAT-CCAGGAAA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73246500 1662 - 125196307 AAAACAAGTAACGCCTCCTGACCCACCACTGTGCT-CTATGCAGCACTGACTCA-----------------CATTAGGAGCAGCTTTTTAGACCAGCACTTTTGTCAAAACGTAGAGAGAAGAAGCTA-AGATGAGAAGCAGAATCTCTCCTCCGGcagccctggccccagccccctCCCATGGGAC-AGCTCCATGGCTGGTGGCCCTCAGCGacccctgccccaccccgccccagACCCAGAGAACACTTACACATATTTGCTGGGAATCTGCCCACGCTGGATCTTCTGGGCATTCTCGTCCAGCTGCCAAGCCATCCAGGACCCAAACGTGCCCTGGGGCAAGGTGTCATCCACGTAGAGAATGTCATCCTTCTTAAAGCTCAGCTCATGCTCCACATCTGCCAGCCGGTCGTACAGGGCCCTGGACCACAGCACAGAGGGAACATGAT----AGGCAGCTCT-GGTCACCGAGGACAAACAAGGTGC---CTTTTGTGGCCAGGCCCCTAAGGCTGATATTCTGCTTTGAGCTATCTCCAAACT-TGATCAGGAACCGCCGA----------GGTGGTGATTCTCAAAG-TGGGGAGCCCTGTGTTTTACATAAAGGGACAAAG--ACTGCCTTTGCTCCCCTAACACTGAG--------------------GGCACATCCCCATC--AGAAAGAA---CTCGCCAAGATCTGAGGCCATAACTTCCCTTTCCAGGTGGCCTTTCCCAGTTGCCTCCCTCC----TCGAAGCCCA-----GGCCCCTGGTTCCCACAGACTGGAATCTCCCTAGGATGG-AAACATGTCATCTCCTAC------------CC-TAGAGACAGGGAGTTGTACCGC--------------ATCAGTGTTCTCATGCTTTCTGTGATCTCGGATCTTAGGAAATGAGAAGAAAGCTCTGAGCTCCTCCTAGAAA-GCCTGCTGCCATCCCTAAATGCCCACA-GCATTTCATACA---GT-AGTAAGGGCACTAAAGATGCCTGGAAGTCCACACACACTGCAGAGGGATCTGCAAACCTGGCTTGGGGGACACCAGaaaaaaaGGAGCACAGCACACAGGAAAACGGGGCTTGACTGCCTCCAAATTCTCCAGGCCTTAAGCCCT---------AAA---GGAGCCC-ACCTGTTTCTTTAAGCCCTAAA----GGTTGTTCTAAGTCACAATCATCTCACCATAAATAAGTGTGCAGATTTGAGTGTCAAGGAATGATGATCATGGCCCCAGC-----CTTGTGGGGCAAGAAAC---AGACAGCCAATTACCAGGAAGAGAATCTCCAATGAAAGCCTGTCCTCTGTCCCCAAATCTCCCACTGATTCCCCAGCCACTGGTACCTGATGTAGAAGCTGTCACCAGGCAGGCCCTTGGCCTTTGTGAACTCCTCGGGGCGGTACTGCACCTTCAGGCGGACGCCATCCCTGGGCTTCAGCATTTCCACGTAGACCTCCTCCACTGTCTTATTCCGCACGTCCAGGCTGCCATACTG-CCAGGGATGGGGGTGGATGT-GTCAGA-AGGCAGAAGCCAGGGGACAGCATGGGCATTCGAGAGGGGCCAGTGCTGACCATATGGCAGAAATTCCACATCCCTCCTTAACTGAGACTCTGCCTGCCTCCCCTCTGCAGGAAGGGCTGAGTCTTCACGGtctccccagcctccagctcccgtGCATGCTCCCTGGACATCAGGTCCTCTG---CCAAGTGGCTGCTCTGCCCTTGACAGCTTAT-CCAGGAAA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72078390 1665 - 125710982 aaaaCAAGTAACGCCTCCTGACCCACCACTGTGCT-CTATGCAGCACTGACTCA-----------------CACTAGGAGCAGCTTTTTAGACCAGCACTTTTGTCAAAACGTAGAGAGCAGAAGCTA-AGATGACAAGCAGAATCCCTCCTTCAGCAGCCCTGGCCCCAGCCCCCTCCCATGGGAC-AGCTCCATGGCTGGTGGCCCTCAGcgacccctgccccaccccgccccagacccagaGACCACTTACACATATTTGCTGGGAATCTGCCCACGCTGGATCTTCTGGGCATTCTCGTCCAGCTGCCAAGCCATCCAGGACCCAAACGTGCCCTGGGGCAAGGTGTCATCCACGTAGAGAATGTCGTCCTTCTTAAAGCTCAGCTCATGCTCCACATCTGCCAGCCGGTCGTACAGGGCCCTGGACCACAGCACAGAGGGAACATGATC---AGGCGGCTCT-GGCCACCGAGGACAAACAAGGTGC---CTTCTGTGGCCAGGCCCCTAAGGCTGATATTCTGCTTTGAGTTATCTCCAAACT-TGATCAGGAACCGCCGA----------GGTGGTGATTCTCAAAG-TGGGGAGCCCTGTGTTTTACATAAAGGGACAAAG--ACTGCCTTTGCTCCCCTAACACTGAG--------------------GGCACATCCCCATCAGAGAAAGAA---CTCGCCAAGATCTGAGGCCATAACTTCCCTTTCCAGGTGGCCTTTCCCAGTTGCCTCCCTCC----TCGAAGCCCA-----GGCTCCTGGTTCCCACAGACTGGAATCTCCCTAGGATGG-AAACATGTCATCTCCTAC------------CC-TAGAGACAGGGAGCTGTACCGC--------------ATCAGTGTTCTCATGCTTTCTGTGATCTCGGGTCTTAGGAAATGAGAAGAAAGCTCTGAGCTCTTCCTAGAAA-GCCTGCTGCCATCCCTAAATGCCCACA-GCATTTCATACA---GT-AGTAAGGGCACTGAAGATGCCTGGAAGTCCACACACACTGCAGAGGGATCTGCAAACCTGGCTTGGGGGACACCAGAAAAAAAGGAGCACAGCACACAGGAAAACAGGGCTTGACTGCCTCCAAATTCTCCAGGCCTTAACCCCT---------AAA---GGAGCCC-ACCTGTTTCTTTAAGCCCTAAA----GGTTGTTCTAAGTCACAATCATCCCACCATAAATAAGTGTGCAGATTTGAGTGTCAAGGAATGATGATCATGGCCCCAGC-----CTTGTGGGGCAAGAAAC---AGACAGCCATTTACCAGGAAGAGAATCTCCAATGAAAGCCTGTCCTCTGTCCCCAAATCTCCCACTGATTCCCCAGCCACTGGTACCTGATGTAGAAGCTGTCACCAGGCAGGCCCTTGGCCTTCGTGAACTCCTCGGGGCGGTACTGCACCTTCAGGCGGACGCCATCCCTGGGCTTCAGCATTTCCACGTAGACCTCCTCCACTGTCTTATTCCGCACGTCCAGGCTGCCATACTG-CCAGGGATGGGGGTGGATGT-GTCAGA-AGGCAGAAGCCAGGGGACAGCATGGGCATTCGAGAGGGGCCAGTGCTGACCATATGGCAGATATTCCACATCCCTCCTTAACTGAGACTCTGCCTGCCTCCCCTCTGCAGGAAGGGCTGAGTCTTCACCGTCTCCCCAGCCTCCAGCTCCCGTGCATGCTCCCTGGACACCAGGTCCTCTG---CCAAGTGGCTGCTCTGCCCTTGACAGCTTAT-CCAGGAAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75535576 1672 - 121768101 aaaaCAAGTTATGTCTCCTGACCCACCAC--TGCT-CTATACAGCACTGACTCA-----------------CACTAGAAGCAGCTTTTTAGATCAGCACTTTTGGCAAAATGTGGCGAGTGGAAGCTA-AGATGAGCAGCAGAGTTCCTCCTCCAGCAGTCCTGGCCCTAGTGCCCT-CCATGGCCCTAGCTCCATGGCTGGCTGCCCTTGGCAACCCCTGCCCCAGCCCGCCCCAGGCTCAGACAACACTTACACATATTTGCTGGGGATCTGCCCACGCTGGATCTTCTGGGCATTCTCGTCCAGCTGCCAAGCCATCCAGGACCCGAATGTGCCCTGGGGCAAGGTGTCATCCACGTAGAGGATGTCATCCTTCTTAAAGCTCAGCTCATGCTCCATGTCTGCCAGCCGGTCGTATAGGGCCCTGAACCACAGCACAGAGGGAACACCATC---AGGCGGCTCT-GGCCACTAAGAATGGACCAGGTGC---CTTCCGTGGCCAGGCCCCTAAGGCTGCTATTCTGCTTTGAGCTGTCTCCAGACT-TGATCAGGAATCACCTCTCCGCATTCTGGTGGTGGTTCTCAAAGAGGGGGAGCCCTGTGTTTTACATAAAGGAACAAAG--ACTGCCTTTGCTCCCCGAACACT-AG--------------------GGCACATCCCCATTAGAGAAAGAA---CTTGCCAAGGTCTGAGGCCATAATTTCTCTTTCCAGGTGGCTTTTCCCATTTGTCTCCCTCC----TCAAAGTCCA-----GGCCCCTGGTTCCTACAGACTGAAATCTCTCCAGGACAG-AAACATGTCACCTCCTAA------------CC-CAGAGGCAGGGAGTTGTACTGC--------------ATCAGTGTTCTCACGCTTTCTGTGATCTAGGATTGTAGGAAACATAAAGAAAGCTCTGAGCTCGTCCTAGAAA-ACCTGATGCCATCGCCAAATGCCCACA-GCCTTTCATACA---GTAAGTAAGGGCACTGAAGATGCCTGGAAGTCCACACACACTGCAGACAGATCTGCAAACCTGGCCTGGGGGATACCAGAAAAAGAGGAGCACAGCACACAGGAAAATGGGGCGTGACAGCCTCAAAATTCTCCAGGCCTTAAGCCCT---------AAAGAGGGAGCCC-ACCTGG----TTAAGCCCTCAAA---AGTTGTTCTAAGACACAATCATCTCACCATAAATAAGTGTGCAGATCTGAGTGTCAAGGAATGATGATCATGGCCCCAGC-----CTTGGGGCGCAAGAAAC---AGAGAGCCATTTACCAGGAAGAGAGTCTCCAATGAAAGCCTCTCCTCTGGCCCCAAATCTCCCACCATTTCCCCAGCCACT-GTACCTGATGTAGAAGCTGTCACCAGGCAGGCCCTTGGCCTTTGTGAACTCCTCGGGGCGGTACTGCACCTTCAGGCGGATGCCATCCCTGGGCTTCAGCATCTCCACGTAGACCTCCTCCACTGTCTTGTTCCGCATGTCCAGGCTGCCATACTG-CCAGGGATGGGGG-GGATGCGGTCAGA-AGGCCGAAGCCAGGGG-CAGCTTGGGTACCCGAGAGGGGCCAGTGATGGGCATATGGCAGAGATTCAACATCCCTCCTTAACTGAGACCATGCTTGCCTCCGCTCTGCAGGAAGGGCTGAGTCTCTGTAGTCTCCCCAGCCCCCAGGTCCCACACATGTTCCCTGGACACGAGGTCCTCTG---CCACGTGGCTGCTCTGTCCTTGACAGTTTAT-CCAGGAAA i calJac3.chr12 C 0 C 0 s mm10.chr14 24145957 1470 + 124902244 AGAAGAGATTATGCATCCCGATTCGCCGTGGCGC--CTCTGTAA-ACTGCCTAC-----------------TGCGAGGAGCAGCTTTCTGGGCC-------------ACATGT-----GCTGCAGCTGCAGCTCCCAAG--GAATCAGTTCCCCAGCAGCTCAGG--CGAGTGTCACCCTGTGAGGC-AGGTCCCACTC------CACACTGTGGTCCCTG-----------CCTAGAGATGGAGAAGACTTACACGTATTTGCTGGGAATCTGCCCACGCTGGATCTTCTGGGCATTCTCATCCAGCTGCCAGGCCATCCAGGACCCAAACACGCCCTGGGGCAACGTATCATCCACGTACAGGATGTCATCTTTCTTAAAACTCAGTTCAGGCTCCACCTCTGCCAGACGGTCATATAGGGCCCTGGACCATTGAACAGAGGACACGGGTTG---AAGACGCCAT------------ACCACACTCTTGC---CTTTTGAGGC-----------AGCTG---------TCTGTGTTGTCTCCAGATA-TCAGGAAGAAAGGCTTT----------GGGGGCA--TCCCGAAG-GGGCCCCTCACATACATTACAGAGCAGGATAGAATTATCCTCTTTCCTTTCCTGATGCTAAG--------------------AGCTCATCCCCACTGGGGAAAGAC---TTCCTC----TATGATGTC---------TTTTCAAACAGACATTTTCTATCTGCCTGTTTCTGAAGTTGAAGCCCA----------CTGCTTCCTGCAAACTGTCACCTCCCTAGGATGGAAAACATGTCACTTCCCAC------------CTGCAGAGTGAGAAGAGTATCACTC--------------ATGCAAGTTTTTATGGACTCCATGGTCTCAGGCTGTGGGGGACATGACAGGAG----------------------TCTGATACCAT---------CCCACA-TCATGACACCCATATGA-CTTACAGGCACCATGGGCACCTGGGA-TCTATG---ACTGCAGAGGGATCTGAGA----GACTCAGGGGAG---AGTGCAGGAGGAACACAACCCACAAGGTAAGAGGCTTTAG--GTCTCAAAATTCCTGTATTCTTAATCCCTCCCCACCAAAAagaaggagga------ggaggaggaagaagagaa----ggagg-----aggaggaAGCATCTCA-TATAGGTAA-------------------AAGCAATGCTAATGATGGCCTGAGCCAGGGCCTTGGGGACAAGTGATCTAGGGCATCCAGTCACCCT--ATGAACTTTCCACAGAGAGCCCCTCCCTTGGCCCTAA---------------CCCA--TGCTGGCACCTGATGTAGAAGCTGTCTCCGGGCAGGCCCTTGACCCTGGTGAACTCCTCATGGCGGTACTGCACCTTCAGGCGAAGGCTATCCTTAGGCTTCAGCATCTCCACATAGACGTCCTCCACTGTCCTGCTGCGCATATCCAGGCTGCCATACTGACCAGGGAC-AGGGTACCAGG-GTCAGACAGACAGTGGC--AGGGATCGCTTGGGTTCTCAGAAGGTTGCAGAACGG-------------------------TGCCTGGTCTGAGACTCTGCCTGCCTCCCTGCCACAG-------------------GCCTCCCCAGTGCCCCTGCCCTATATG-ACTTCATGGCTACTAGAGCCAATGGAACCACCTAGCAGTGATGACCTCTACTTCCTGC-TTAAGAAA i mm10.chr14 I 1419 I 454 s canFam3.chr4 27700637 1598 + 88276631 TTAAAAAGTTGCATTTCCTAAGTTGCCACCATTCTCCCATGTAGCACTGACCTATGGGCGGCACTGAACTGCGCTAGGAGCAGCTTCCTGGACAAGCAGTTGGGGCAAAGCGTGCAGACCAGAAGCCA-GCGTG-----------------CACGGCAGCGTGAGCCCCGA-----TCCTGTGGGAC-AGCCCCAGGGCTGGCG--------------CTGCCCCCTCCAAGCCCAGACATGG---CCACTTACACGTATTTGCTGGGGATCTGCCCACGCTGCATCTTCTGGGCGTTCTCATCTAGCTGCCAGGCCATCCAGGACCCAAAGGTACCCTGAGGCAAGGTGTCATCAACGTAGAGGATGTCATCTTTCTTAAAGCTCAGCTCATGCTCCACCTCCGCCAGCCGGTCGTACAGGGCCCTGGAGCAGGTGACAGAGGGAACCGGATCAGGAGGGGGCTCTGGGCTGTGGAGGACCAACCAGCCACACACTTTGGCAGCCAGTCTCCTGGGACAGCTCTCCTGCTCTGCGCTTTCCCCGGACCACAATCAGGACCCACCTC-TCCCATCCTGGAGGCAGTTCCCAAAG-AAGGGAGCCTCA-GCTTCA-GTAACGGAACAAAG---TTGTCTTGCCTCCCCTGAGACTGAGGCTCCCCGGCAATGAGGGCTGCCTCACACCCATCGGATAAAGAACTTCTTGCCAAGGACCAGAACCATATCCCGCCTTCCAAACGGGCCTT-------TATCTCCCGAG----TCAAGGTCAA-----------CGGTTCCTACAGAAGGGAAACTCCTCAGGATGG-AA--ATCTCATCTCCTACCAAGGAGGGTGGCC-TAGAGACAGAGA-CCGTATCTCACAGTACACAACTGATTAGTGCTTTT-TCCTTTCTGTGGCCTCAGAACTTAGGAAACACGAAGGAAGCTA-GAGCCCCTCTAGAAAACACCTGGTGGCTGGGCTG---GCCTGCACACAAGTCCTACT---GC-ACTTTGGGCAC-GTGCATGCCTTGACACTCACACACCCTGCAGAC-GATCTGCAGCCAGGGATCGGGGCAGACCAG---GAGAGGAGCACAGTGCACAGGAAAATGGGGCTCTGCAGCCTCAAAATTTCCCAAGCCCCAAACCCT---------AAATAGGGAGCCCTATGTGGTCCTACAAGTCCTCAAGTGAAGTTTTCCTAAGTCACATGCATCTCTCTGTGAGCACGT-----GGCTTGGGGCCCATGCAACAAGGACCATGGTCTCACT-----CTCTCTGTTGCAGAGAC-----------ACTCACCAGGACCAG--TCTCCTGAGGAAGCCCCTCCCCTGGCCCCGAATCCC---TGGAACTCCTAGCCCCTGGTACCTGATGTAGAAGCTGTCGCCAGGCAGACCCTTGACCTTGGTGAACTCCTCAGGGCGGTACTGCACCTTGAGACGGACACTGTCCTTGGGCTTCAGCATCTCCACGTAGACCTCCTCCACTGTCCTGTTGCGCACATCCAGACTGCCATACTG-CCAGAGGACAGGGGACTGAG-GTCAGA-GGGCAGAAGCCAGAGA-CGGCTTAGGCACCCT-GACAGGGCAGTAGGGGG-AGAAGGCAG--ATTTAAGATCC--CCTTAACCGGGAATCTGCCTGCCTCGCCTCTGCAGGTAAGGCTGAGT-----------------------------------------------------CCTCTG-------------------CCCCCAACAGCTTCTCCCACGAGA i canFam3.chr4 C 0 C 0 a score=246355.000000 s hg38.chr10_KI270825v1_alt 46885 77 + 188315 AACCCTGTTCTGGT-GACTGGCAAGTCTGGGCTTTTCAGAATAGGGACCTTCCTCTTGCTGATGTTGCCTGTGCt----ttt s panTro4.chr10 76417515 77 + 133524379 ACCCCTGTTCTGGT-GACTGGCAAGTCTGGGCTTTTCAGAATAGGGACCTTCCTCTTGCTGATGCTGCCTGTGCt----ttt i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76085648 81 - 133410057 AACCCCGTTCTGGT-GACCGGCAAGTCTGGGCTTTTCAGAATAGGGACCTTCCTCTTGCTGATGCTGCCTGTGCttttattt i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35029024 77 + 104879549 AACCCTGCTCTGGT-GACCGGCAAGTCTGGGCTTTTCAGAATAGGGACCTTCCTCTTGCTGATGCTGCCTGTGCt----ttt i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73821553 74 - 130959383 AACCCTGTTCTGGT-GACCAGCAAGTCTGGGCTTTTCAGAATAGGGCCCTTCCTCTTGCTGATGCTACCTGTGCt------- i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75383391 77 - 133195287 AACCCTGTTCTGGT-GACCAGCAAGTCTGGGCTTTTCAGAATAGGGCCCTTCCTCTTGCTGATGCTACCTGTGCt----ttt i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73248162 77 - 125196307 AACCCTGTTCTGGT-GACCAGCAAGTCTGGGCTTTTCAGAATAGGGCCCTTCCTCTTGCTGATGCTAcctgtgct----ttt i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72080055 77 - 125710982 AACCCTGTTCTGGT-GACCAGCAAGTCTGGGCTTTTCAGAATAGGGCCCTTCCTCTTGCTGATGCTACCTGTGCt----ttt i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75537248 74 - 121768101 AGCCCTGTTCTGGT-GCCCAACAAGTCTGGGCTTTTCAGAATAGGGCCCTTCCTCTTGCTGATCCAACCTGTGCt------- i calJac3.chr12 C 0 C 0 s canFam3.chr4 27702235 77 + 88276631 AACCCTGTGCTAATCTCCCAGCAAGTTAGGGCTATG-AAAACACAGCACTTCATCTTGTTGAAGCTATTTCTGTC----TTT i canFam3.chr4 C 0 I 504 e mm10.chr14 24147427 454 + 124902244 I a score=926513.000000 s hg38.chr10_KI270825v1_alt 46962 313 + 188315 atttatttattttctgaaaca-gggtct-ccctctgtcacacagactgagtgcagtggtgcaatcacagctcacagtagcctatacct-cttaggctcaagtgatcctcccacctcagcctccagaatagctgggacaacaggcacact---ccaccacacctggctaatttttttgttttgttttctgtaaagacagggtctcactatgttgcccaggccggtcttgaactcttgggctcaactaattctcccaccttggcctcctaaaattc-------acaggtgtgagccaccaaacccagccCAACTTGTGCCTTTATATT s panTro4.chr10 76417592 313 + 133524379 atttatttattttctgaaaca-gggtct-ccctctgtcacacagactgagtgcagtggtgcaatcacagctcacagtagcctatacct-cctaggctcaagtgatcctcccacctcagcctccagaatagctgggacaacaggcacact---ccaccacacctggctaatttttttgttttgttttctgtaaagacagggtctcactatgttgcccaggctggtcttgaactcttgggctcaactaattctcccaccttggcctcctaaaattc-------acaggtatgagccaccaaacccagccCAACTTGTGCCTTTATATT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76085729 317 - 133410057 atttatttattttctgaaaca-gggtct-ccctctgtcacacagactgagtgcagtggtgcaatcacagctcacagtagcctatacctccctaggctcaagtgatcctcccacctcagcctccagaatagctgggacaacaggcacactccaccaccacgcctgactaatttttttgttttgttttctgtaaagacagggtctcactatgtcgcccaggctggtcttgaactcttgggctcaagtaattctcccaccttggcctcctaaaattc-------acaggtgtgagccaccaaacccagccCAACTTGTGCCTTTATATT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35029101 313 + 104879549 atttatttattttctgaaaca-gggtct-ccctctgtcacacagactgagtgcagtggtgcaatcacagctcacagtagcctagacct-cctaggctcaagtgatcctcccgccccagcctccagaatagctgggacaacaggcacact---ctaccacgcctggctaatttttttgttttgttttctgtaaagatagggtctcgctatgttgcccaggctggtcttgaactcttgggctcaagtaattctcccaccttggcctcctaaaattc-------acaggtgtgagccaccaaacccagccCAACTTGTGCCTTTATATT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73821627 318 - 130959383 -tttatttattttttgaaaca-gggtctcccctctgtcacacagactgagtgcagtagtgcaatcacagctcactgtagcccaatcct-cctaagctcaagtgatcctcccacctcagcctccagagtagctgggaatacaggcacact---ccaacatgcctggctaa--attttgttttgttttttgtaaggatagggtctcactatgttgcccaggctggtcttgaactcctgggcgcaagcaattctcccaccttggcctcctaaagttctgggattacaggtgtgagccaccaagcccagccCAACTTGTGCCTTTATATT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75383468 319 - 133195287 atttatttattttttgaaaca-gggtctcccctctgtcacacagactgagtgcagtagtgcaatcacagctcactgtagcccagacct-cctaagctcaagtgatcctcccacctcagcctccagagtagctgggactacaggcacact---ccaccatgcctggctaa--attttgttttgttttttgtaaagatagggtctcactatgttgcccaggctggtcttgaactcctgggctcaagcaattctcccaccttggcctcctaaagttctgggattacaggtgtgagccaccaagcccagccCAACTTGTGCCTTTATATT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73248239 319 - 125196307 atttatttattttttgaaaca-gggtctcccctctgtcacacagactgagtgcagtagtgcaatcacagctcactgtagcccagacct-cctaagctcaagtgatcctcccacctcagcctccagagtagctgggactacaggcacact---ccaccacgcctggctaa--attttgttttgttttttgtaaagatagggtctcactatgttgcccaggctggtcttgaactcctgggctcaagcaattctcccaccttggcctcctaaagttctgggattacaggtgtgagccaccaagcccagcccaacTTGTGCCTTTATATT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72080132 319 - 125710982 atttatttattttttgaaaca-gggtctcccctctgtcacacagactgagtgcagtagtgcaatcacagctcactgtagcccagacct-cctaagctcaagtgatcctcccacctcagcctccagagtagctgggactacaggcacact---ccaccacacctggctaa--attttgttttgttttttgtaaagataggatctcactatgttgccgaggctggtcttgaactcctgggctcaagcaattctcccaccttggcctcctaaagttctgggattacaggtgtgagccaccaagcccagccCAACTTGTGCCTTTATATT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75537322 315 - 121768101 -tttattaattttttgagacaggggtct-tcctctgtcacacagactgagtgcagtggtgcaatcgcagtttacagtagccttgacct-tctgagctcaagtgatcctccctcctcagcctccgaagtagctgggactacaggtacact---ccaccacagctggctaa-----tctttttgttttctgtagagctagggtctcactatgttgcccagtctggtcttaaactcctgggctcaagcaattctcccacctaggcctcccaaaattctgggattacaggtgtgagccaccAAGCACAGACCAACTTGTGCCTTTATATT i calJac3.chr12 C 0 C 0 e canFam3.chr4 27702312 504 + 88276631 I e mm10.chr14 24147427 454 + 124902244 I a score=638797.000000 s hg38.chr10_KI270825v1_alt 47275 208 + 188315 CTCACAAACCATCTCCCCCATGAGGCAGGAGACC-----ACAGAGAAAGA--CCATCCTCTCTCATCAGAACAGAGTCCTGCAGCTACATCACCTGAGGGCGAGCACCCCCT---GATGCCCAGGGCCTGAGCCAAG-GCTCTGCCCTCAGGTTCCCTCAATGGCCTGCCTGGCTTCACAGGGACCTCCTCAGAAGGGCTTGGCAGGATTCTGGGTTTA s panTro4.chr10 76417905 208 + 133524379 CTCACAAACCATCTCCCCCATGAGGCAGGAGACC-----ACAGAGAAAGA--CCATCCTCTCTCATCAGAACAGAGTCCTGCAGCTACATCACCTGAGGGCGAGCACCTCCT---GGTGCCCAGGGCCTGAGCCAAG-GCTCTGCCCTCAGGTTCCCTCAATGGCCTGCCTGGCTTCACAGGGACCTCCTCAGAAGGGCTTGGCAGGATTCTGGGTTTA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76086046 208 - 133410057 CTCACAAACCATCTCCCCCATGAGGCAGGAGACC-----ACAGAGAAACA--CCATCCTCTCTCATCAGAACAGAGTCCTGCAGCTACATCACCTGAGGGCGAGCACCTCCT---GGTGCCCAGGGCCTGAGCCAAG-GCTCTGCCCTCGGGTTCCCTCGATGGCCTGCCTGGCTTCACAGGGACCTCCTCAGAGGAGCTTGGCAGGATTCTGGGTTTA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35029414 208 + 104879549 CTCACAAACCATCTCCCCCACGAGGCAGGAGACC-----ACAGAAAAAGA--CCATCCTCTGTCATCAGAACAGAGTCCTGCAGCTACATCACCTGAGGGCGAGCACCTCCT---GGTGCCTAGGGCCTGAGCCAAG-GCTCTGCCCTCAGGTTCCCTCTATGGCCTGCCTGGCTTCACAGGGACCTCCTCAGAGGGGCTTGGCAGGATTCTGGGTTTA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73821945 206 - 130959383 CTCACAAACCATCTCCCCCATGAGGCAGGAGACC-----ACAGAGAAAAA--CCATCCTCTCTCATCAGAAC--AGTCCTGCAGCTACACCACCTGAGGGCAAGCACCTCCT---GGTGCCCAGGGCCTGAGCCAAG-GCTCTGCCCTCAGGTTCCCTCGATGGCCTACCTGGCTTCACAGGGACCTGCTCAAAGGGGCTTGGCAGAATTCTGGGTTTA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75383787 206 - 133195287 CTCACAAACCATCTCCCCTATGAGGCAGGAGACC-----ACAGAGAAAAA--CCATCCTCTCTCATCAGAAC--AGTCCTGCAGCTACACCACCTGAGGGCAAGCACCTCCT---GGTGCCCAGGGCCTGAGCCAAG-GCTCTGCCCTCAGGTTCCCTCGATGGCCTACCTGGCTTCACAGGGACCTGCTCAAAGGGGCTTGGCAGAATTCTGGGTTTA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73248558 206 - 125196307 CTCACAAACCATCTCCCCCATGAGGCAGGAGACC-----ACAGAGAAAAA--CCATCCTCTCTCATCAGAAC--AGTCCTGCAGCTACACCACCTGAGGGCAAGCACCTCCT---GGTGCCCAGGGCCTGAGCCAAG-GCTCTGCCCTCAGGTTCCCTCGATGGCCTACCTGGCTTCACAGGGACCTGCTCAAAGGGGCTTGGCAGGATTCTGGGTTTA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72080451 206 - 125710982 CTCACAAACCATCTCCCCCATGAGGCAGGAGACT-----ACAGAGAAAAA--CCATCCTCTCTCATCAGAAC--AGTCCTGCAGCTACACCACCTGAGGGCAAGCACCTCCT---GGTGCCCAGGGCCTGAGCCAAG-GCTCTGCCCTCAGGTTCCCTCGATGGCCTACCTGGCTTCACAGGGACCTGCTCAAAGGGGCTTGGTAGGATTCTGGGTTTA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75537637 187 - 121768101 CTCATGAACCATCTCCCCACTGAGGCAGGAGACC-----ACAGAGAAAGA--CCATCC------------------TCCTGCAGCTGCACTACCTGAGGGCAGGCACCTCCT---GGTGCCCAGGGCCTGAGCCAAGTGGCCTG--CTTGGATTCA--CAGTGGCCTGCTTGGATTCACAGTGACCTGCTCAGAGGAGCCTGGCAGCATTCTGTGTTTA i calJac3.chr12 C 0 C 0 s mm10.chr14 24147881 195 + 124902244 CCTATATGCCATCTCCCCCAGGGGATGGGAGACCTAGAGAGTGAGAAAGAGCCAAACCAGTCACCTCAG-----AGACATATGGCT------CATGA-GACTGGCACTTCCTATGGATGTCCCCCATCAGAGCCAAG-GCTGAGCCCTTGAGATGCCTTGGTGGCTCACCTCACTGCCCAGGGA-----------GGGCTTGATAGCACCCATCGTTTA i mm10.chr14 I 454 I 52 e canFam3.chr4 27702312 504 + 88276631 I a score=26456.000000 s hg38.chr10_KI270825v1_alt 47483 8 + 188315 CAGGGATT s panTro4.chr10 76418113 8 + 133524379 CAGAGATT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76086254 8 - 133410057 CAGGGATT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35029622 8 + 104879549 CAGGGATT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73822151 8 - 130959383 CAGGGatt i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75383993 8 - 133195287 CAGGGATT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73248764 8 - 125196307 CAGGGATT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72080657 8 - 125710982 CAGGGATT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75537824 8 - 121768101 CAGGGATT i calJac3.chr12 C 0 C 0 e canFam3.chr4 27702312 504 + 88276631 I e mm10.chr14 24148076 52 + 124902244 I a score=159411.000000 s hg38.chr10_KI270825v1_alt 47491 61 + 188315 AAAAATCAACCCTggccaggcacagtggctcacgcctgtaatccctgtactttgggaggcc s panTro4.chr10 76418121 61 + 133524379 AAAAATCAACCCTggccaggcacagtggctcacgcctgtaatccctgtactttgggaggcc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76086262 61 - 133410057 AAAAATCAACCCTgaccaggcacagtggctcacgcctgtaatccctgtactttgggaggcc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35029630 61 + 104879549 AAAAATCAACCCTggccagacacagtggctcacgtctgtaatccctgtactttgggaggcc i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73822159 61 - 130959383 aaaaatcaaccctggccaggcacagtggctcacgcctgtaatccctgtactttgggaggcc i rheMac3.chr9 C 0 M 554 s macFas5.chr9 75384001 61 - 133195287 AAAAATCAACCCTggccaggcacagtggctcacgcctgtaatccctgtattttgggaggcc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73248772 61 - 125196307 AAAAATCaaccctggccaggcacagtggctcacacctgtaatccctgtactttgggaggcc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72080665 61 - 125710982 AAAAATCAACCCTggccaggcacagtggctcacgcctgtaatccctgtactttgggaggcc i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27702312 504 + 88276631 I e mm10.chr14 24148076 52 + 124902244 I e calJac3.chr12 75537832 0 - 121768101 C a score=501.000000 s hg38.chr10_KI270825v1_alt 47552 1 + 188315 g s panTro4.chr10 76418182 1 + 133524379 g i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76086323 1 - 133410057 g i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35029691 1 + 104879549 a i nomLeu3.chr18 C 0 C 0 s macFas5.chr9 75384062 1 - 133195287 a i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73248833 1 - 125196307 a i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72080726 1 - 125710982 g i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27702312 504 + 88276631 I e mm10.chr14 24148076 52 + 124902244 I e calJac3.chr12 75537832 0 - 121768101 C e rheMac3.chr9 73822220 554 - 130959383 M a score=298906.000000 s hg38.chr10_KI270825v1_alt 47553 133 + 188315 aggcgggtggatcacctgaggtcaggagtttgagac-------------------------------------------------------------------------------------------cagcctggccaacatgatgaaaccccgtctctacaaaaaatacaaaaataaattagctgggcgtgttggcgcatgcctgtaatctcagctactcagg s panTro4.chr10 76418183 224 + 133524379 aggcgggtggatcacctgaggtcaggagtttgagacaagcctggccaggcacagtggctcacgcctgtaatccctgtaatttgggaggccgaggcgggtggatcacctgaggtcaggagtttgagaccagcctggccaacatgatgaaaccccgtctctacaaaaaatacaaaaataaattagctgggcgtgttggcgcatgcctgtaatctcagctactcagg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76086324 133 - 133410057 aggcgggtggatcacctgaggtcaggagtttgagac-------------------------------------------------------------------------------------------cagcctggccaacatgatgaaaccccgtctctactaaaaatacaaaaaaaaattagctgggcatgttggcgcatgcctttattctcagctactcagg i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35029692 133 + 104879549 aggcgggtggatcacctgaggtcaggagtttgagac-------------------------------------------------------------------------------------------cagcctggccaacgtgatgaaaccccatctctactaaaaatacaaaaaaaaattagctgagcgtgttggcgcacgcctataatctcagctactcagg i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73822775 133 - 130959383 aggcaggtggatcacctgaggtcaggagtttgagac-------------------------------------------------------------------------------------------cagcctgtccaatgtgataaaaccccgtctctactaaaaatacaaaacaaaattagctgggcgtgttggcgcgcacctgtaatctcagctactcagg i rheMac3.chr9 M 554 C 0 s macFas5.chr9 75384063 133 - 133195287 aggcaggtggatcacctgaggtcaggagtttgagac-------------------------------------------------------------------------------------------cagcctgtccaatgtgataaaaccccgtctctactaaaaatacaaaacaaaattagctgggtgtgttggtgcgcacctgtaatctcagctactcagg i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73248834 133 - 125196307 aggcaggtggatcacctgaggtcaggagtttgagac-------------------------------------------------------------------------------------------cagcctgtccaatgtgataaaaccccgtctctactaaaaatacaaaacaaaattagctgggcatgttggcgcgcacctgtaatctcagctactcagg i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72080727 133 - 125710982 aggcaggtggatcacctgaggtcaggagtttgagac-------------------------------------------------------------------------------------------cagcctgtccaatgtgatgaaaccccgtctctactaaaaatacaaaacaaaattagctgggcgtgttggcgcgcacctgtaatctcagctactcagg i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27702312 504 + 88276631 I e mm10.chr14 24148076 52 + 124902244 I e calJac3.chr12 75537832 0 - 121768101 C a score=179892.000000 s hg38.chr10_KI270825v1_alt 47686 113 + 188315 aggctgaggcaggagaatcgcttgaacctgggaggcggaggttgtggtgagttgagattgcaccactgcactccagcctgggcaacaagggcaaaactctgtctc------------aaaaaaaa s panTro4.chr10 76418407 113 + 133524379 aggctgaggcaggagaatcgcttgaacctgggaggtggaggttgtggtgagttgagattgcaccactgcactccagcctgggcaacaagggcaaaactctgtccc------------aaaaaaaa i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76086457 125 - 133410057 aggctgaggcaggagaatcgcttgaaactgggaggtggaggttgcggtgagtcgagattgcatcaccgcactccagcctgggcaacaagagcaaaactctgtctccaaaaaaaaaaaaaaaaaaa i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73822908 109 - 130959383 tggctgaggcaggagaatcgcttgaacctgggaggcagaagttgcagtgaaccaagattgtgccactgtactccagtgtgggcaacaagagcaaaactccgtctc----------------aaaa i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75384196 109 - 133195287 tggctgaggcaggagaatcgcttgaacctgggaggcagaagttgcagtgaaccaagattgtgccactgtactccagtgtgggcaacaagagcaaaactccgtctc----------------aaaa i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73248967 109 - 125196307 tggctgaggcaggagaatcgcttgaacctgggaggcagaagttgcagtgaaccaagattgtgccactgtactccagcgtgggcaacaagagcaaaactccgtctc----------------aaaa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72080860 110 - 125710982 tggctgaggcaggagaatcgcttgaacctgggaggcagaagttgcagtgaaccaagattgtgccactgtactccagcgtgggcaacaagagcaaaactccgtctc---------------aaaaa i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27702312 504 + 88276631 I e mm10.chr14 24148076 52 + 124902244 I e nomLeu3.chr18 35029825 0 + 104879549 C e calJac3.chr12 75537832 0 - 121768101 C a score=452384.000000 s hg38.chr10_KI270825v1_alt 47799 194 + 188315 aaaaaaaTCAATCCTGAggctggacacggtagctcatgcctataatcacagcagtttggaaggccgaggcgggcagatcacttgaggtcaggagtttgagaccagcctgggcaacatggtgaaa-ctggtctctactgaaaatataaaaattagccgggtatcgtggcacatgcctgtagtcccagctactcgga s panTro4.chr10 76418520 194 + 133524379 aaaaaaaTCAATCCTGAggctgggcacggtagctcatgcctataatcacagcaatttggaaggccgaggcgggcagatcacttgaggtcaggagtttgagaccagcctgggcaacatggtgaaa-ctggtctctactgaaaatataaaaattagccgggtatcgtggcacatgcctgtagtcccagctactcgga i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76086582 195 - 133410057 aaaaaaaTCAATCCTGAagctgggcacggtagctcatgcctgtaatcacagcaatttggaaggccaaggtgggcagatcacttgaggtcaggagtttgagaccagcctgggcaacatggtgaaacctggtctctactaaaaatataaaaattagctgggtatcgtggcacatgcctgtagtcccagctactcgga i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73823017 195 - 130959383 aaaaaaaTCAACCCTGAggctgggcacggtagctcatgcctgtcatcatagcactttggaaggccaaggcgggcagatcacttgaggtcaggagtttgagaccagcctgggcaacatggtgaaatctggtctctactaaaaatataaaaattagcttggtattgtggcacacgcctgtagtcccagctactcgga i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75384305 195 - 133195287 aaaaaaaTCAACCCTGAggctgggcacggtagctcatgcctgtcatcatagcactttggaaggccaaggcgggcagatcacttgaggtcaggagtttgagaccagcctgggcaacatggtgaaatctggtctctactaaaaatataaaaattagcttggtattgtggcacacgcctgtagtcccagctactcgga i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73249076 195 - 125196307 aaaaaaatcaaccctgaggctgggcacggtagctcatgcctgtcatcatagcactttggaaggccaaggtgggcagatcacttgaggtcaggagtttgagaccagcctgggcaacatggtgaaatctggtctctactaaaaatataaaaattagcttggtattgtggcacacgcctgtagtcccagctactcgga i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72080970 195 - 125710982 aaaaaaaTCAACCCTGAggctgggcacagtagctcatgcctgtcatcatagcactttggaaggccaaggcgggcagatcacttgaggtcaggagtttgagaccagcctgggcaacatggtgaaatctggtctctactaaaaatataaaaattagcttggtattgtggcacacgcctgtagtcccagctactcgga i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75537832 192 - 121768101 AAAAAAATCAACCCTGAggccaggtgtggtagttaatgactgtaatcctagcactctggaaggctgaggtggg-agat-acttgaggtctggagtttgagaccagtctgggcaacatggtgaaacccagtctctactaaaaatataaaaattagctgggtgtcgtggtgcacacctgcagtcccagctactcag- i calJac3.chr12 C 0 C 0 e canFam3.chr4 27702312 504 + 88276631 I e mm10.chr14 24148076 52 + 124902244 I e nomLeu3.chr18 35029825 0 + 104879549 C a score=322774.000000 s hg38.chr10_KI270825v1_alt 47993 115 + 188315 aggctgaggcaggagaatcgcttgaacctgggaagtgaaggttgcagtgagctgagattgtgccagtgcactccagcctgggcgacagagcaagactctgcctcaacaacaacaa s panTro4.chr10 76418714 115 + 133524379 aggctgaggcaggagaatcgcttgaacctgggaagtgaaggttgcagtgagctgagattgtgccagtgcactccagcctgggcgacagagcaagactctgcctcaacaacaacaa i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76086777 112 - 133410057 aggctgaagcaggagaatcgcttgaacctgggaagtgaaggttgcagtgagctgagattgtgccagtacactccagcctgggcgacagtgcaagactctgcct---caacaacaa i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35029825 112 + 104879549 aggctgaggcaggagaatcgcttgaacctgggaagtgaaggttgcagcgagctgagattgttccagtgcactccagcctgggtgatagagcaagactctgcct---caacaacaa i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73823212 112 - 130959383 aggctgaggcagaagaaccgcttgaacctgggaagtgaaggttgcagtgagccgagattgtgccagtgcaatccagtctgagcaacagagcaagactctgcct---caacaacaa i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75384500 112 - 133195287 aggctgaggcagaagaaccgcttgaacctgggaagtgaaggttgcagtgagccgagattgtgccagtgcaatccagtctgagcaacagagcaagactctgcct---caacaacaa i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73249271 109 - 125196307 aggctgaggcagaagaaccgcttgaacctgggaagcgaaggttgcagtgagccgagattgtgccagtgcactccagcctaagcaacagagcaagactctgcct------caacaa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72081165 111 - 125710982 aggctgaggcagaagaaccgcttgaacctgggaagtgaaggttgcagtgagccgagattgtgccagtgcactccagcctga-caacagagcaagactctgcct---caacaacaa i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75538024 109 - 121768101 ---ctaaggcaggagaatcggttgaacctgggaagcagaggctgcagtgagctgagatcacggcattgcactgcagcctgggtgacagaacaagactctgcct---caacaacaa i calJac3.chr12 C 0 C 0 e canFam3.chr4 27702312 504 + 88276631 I e mm10.chr14 24148076 52 + 124902244 I a score=149293.000000 s hg38.chr10_KI270825v1_alt 48108 45 + 188315 caaaaGTCAGCCCTGACTGGCTCACCAGATGAGAGGCTGTACTCC s panTro4.chr10 76418829 45 + 133524379 caaaaGTCAGCCCTGACTGGCTCACCAGATGAGAGGCTGTACTCC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76086889 45 - 133410057 caaaaGTCAGCCCTGACTGGCTCACCAGATGAGAGGCTGTACTCC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35029937 45 + 104879549 caaaaGTCAGCCCTGATTGGCTCACCAGATGAGAGGCTGTACTCC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73823324 45 - 130959383 cagaaGTCAGCCCTGACTGGCTCACCAGATGAGAGGCTGTACTCC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75384612 45 - 133195287 cagaaGTCAGCCCTGACTGGCTCACCAGATGAGAGGCTGTACTCC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73249380 45 - 125196307 CAGAAGTCAGCCCTGACTGGCTCACCAGATGAGAGGCTGTACTCC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72081276 45 - 125710982 cagaaGTCAGCCCTGACTGGCTCACCAGATGAGAGGCTGTACTCC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75538133 41 - 121768101 C---AGTCAGCCCTGACTGGCTCACCAGGTGAGAGGTGGTACT-C i calJac3.chr12 C 0 C 0 s canFam3.chr4 27702816 44 + 88276631 CAGCATTCAACACCAACAGGGGCACCAGGCAGGAGGCCGTGCTC- i canFam3.chr4 I 504 C 0 e mm10.chr14 24148076 52 + 124902244 I a score=3610383.000000 s hg38.chr10_KI270825v1_alt 48153 1186 + 188315 TCCGTCTT-----------TGG--------------------------------------TGCCACCTGAGATGGCAGCAAGCCCACT-GTGCAGGTAGATGGAGGCCTGGCCTGCTCAGCAGCTCAGAACTCACCTCCAGGATGAGGTCCCCTGGCACGAGGCCGTCAGGACCCTTGGCAGGACTGTCATCCTCCACCTCGGCCACAAACACCCCATGCAGGTTCCCACCACACAAGTGCACCCCAAGCTCCAGCTGGGACTTTTTGATGAAGACAACGCGTGGCTCCAGGGTCTTCTTGTTGGCATCTCCCGCAATCCTTTCAGGAAA-AAAACAAAGTTCCTCAACTGTGCACAA----AGAGGAGGCACAAAAAGACAAAGCAGTGGCCAATGCCCTAACCGCTTTCTGCCT--GCTTCTTGGGGT-CTCAGAACCACAGGGAGCTGAGAGGTGGCCTCTAG-----TTCTACTGGCTCGGCGTTCGGGACAGGATG-CTAAGGT--GCACTG---GAGATGAAGGCAAGACCCCAGGTCC-AAAGCCAGTTAGCGGGGGCAGTCAAAACCGTAAAT------CAGTGC-CCCTGCTCCCAGGCCCGGCTATCAATCTCA-TGCCTTAAAGATCAGGATGGCCTCCCT-CCCATGTGGATCACACTCATTTTCCTAACTTAGTACTTCCTAAGGAAAGGTAAAGTTGGCCTCACTGTCCAGAGCACAGCAATGTATTCAGCAA-ATGTCTACGAAGAAGCTTCTATAGACCAG-CAAC--TGCTAACTTGTGAAGAGG-GGCCCCTTGCCATCAAGGCACTTACAATCAAGGAAGGGAAGCTGAAAGTAAGCTGCTGAACACATGGAGGGAGTGAGATG-----GGACAGCGATGGAAACAGA-----TACAGGGGGCTTCAGGGGAGATGCCAGCCCGGGAGGAAAACCTTGCAGCAGGTAAGTTCCAATGTGACAGACTCTGGTATAGAGAATGCAGAGCTGGCCTCATTCTGTGAGATGCTGCCCAGGGCTTGGTGAAGGCCTCTCAGTGCTGGAGACACAGCTCC-TCCAGGACGGCAGAGTGATCATGTCACACCATGGCCTGGATGGCCCTCCCTGCAGCCCCAGGCCAGGCTGGACGCTGTGCAGCTCCCATGGAGCTCCTTCCTCCTCCTGAACTCT-GCTGCTCCCTCGGCCTGGACTTCTCTTTATGCCCACTCTTGGCTCTTGCCTGTCCTGAACATTTTAATCCAGCTGCCACCTC-C-CCTGCCACA s panTro4.chr10 76418874 1186 + 133524379 TCCGTCTT-----------TGG--------------------------------------TGCCACCTGAGATGGCAGCAAGCCCACT-GTGCAGGTAGATGGAGGCCTGGCCTGCTCAGCAGCTCAGAACTCACCTCCAGGATGAGGTCCCCTGGCACGAGGCCGTCAGGACCCCTGGCAGGACTGTCATCCTCCACCTCGGCCACAAACACCCCATGCAGGTTCCCACCACACAAGTGCACCCCAAGCTCCAGCTGGGACTTTTTGATGAAGACAACGCGTGGCTCCAGGGTCTTCTTGTTGGCATCTCCCGCAATCCTTTCAGGAAA-AAAACAAAGTTCCTCAACTGTGCACAA----AGAGGAGGCACAAAAAGACAAAGCAGTGGCCAATGCCCTAACTGCTTTCTGCCT--GCTtcttggggt-ctcagaaccacagggagctgagaggtggcctctag-----ttctactggcttggcgttcgggacaggatg-ctaaggt--gcactg---gagatgaaggcaagaccccaggtcc-aaagccagttagcgggggcagtcagaaccgtaaat------cagtgc-ccctgctcccaggcccggctatcAATCTCA-TGCCTTAAAGATCAGGATGGCCTCCCT-CCCATGTGGATCACACTCATTTTCCTAACTTAGTACTTCCTAAGGAAAGGTAAAGTTGGCCTCACTGTCCAGAGCACAGCAATGTATTCAGCAA-ATGTCTACGAAGAAGCTTCTATAGACCAG-CAAC--TGCTAACTTGTGAAGAGG-GGCCCCTTGCCATCAAGGCACTTACAATCAAGGAAGGGAAGCTGAAAGTAAGCTGCTGAACACATGGAGGGAGTGAGATG-----GGACAGCGATGGAAACAGA-----TACAGGGGGCTTCAGGGGAGACGCCAGCCCGGGAGGAAAACCTTGCAGCAGGTAAGTTCCAATGTGACAGACTCTGGTATAGAGAATGCAGAGCTGGCCTCATTCTGTGAGATGCTGCCCAGGGCTTGGTGAAGGCCTCTCAGTGCTGGAGACACAGCTCC-TCCAGGACGGCAGAGTGATCATGTCACACCATGGCCTGGATGGCCCTCCCTGCAGCCCCAGGCCAGGCTGGACGCTGTGCAGCTCCCATGGAGCTCCTTCCTCCTCCTGAACTCT-GCTGCTCCCTCGGCCTGGACTTCTCTTTATGCCCACTCTTGGCTCTTGCCTGTCCTGAACATTTTAATCCAGCTGCCACCTC-C-CCTGCCACA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76086934 1185 - 133410057 TCCGTCTT-----------TGG--------------------------------------TGCCACCTGAGATGGCAGCAAGCCCACT-GTGCAGGTAGATGGAGGCCTGGCCTGCTCAGCAGCTCAGAACTCACCTCCAGGATGAGGTCCCCCGGCACGAGGCCGTCAGGACCCTTGGCAGGACTGTCATCCTCCACTTCAGCCACAAACACCCCATGCAGGTTCCCACCACACAAGTGCACCCCAAGCTCCAGCTGGGACTTTTTGATGAAGACAATCCGTGGCTCCAGGGTCTTCTTGTTGGCATCTCCCGCAATCCTTTCAGGAAA-AAAACAAAGTTCCTCAACTGTGCACAA----GGAGGAGGCACAAAAAGACAAACCAGTGGCCAATGCCCTAACCGCTTTCTGCCT--GCTtcttggggt-ctcagaaccacagggagctgagaggtggcctctag-----ttctactggctcggcattcaaggcaggatg-ctaaggt--gcactg---gagatgaaggcaagaccccaggtcc-aaagccagttgg-ggggggagtcaaaaccataaat------cagtgc-ctctgctcctgggcccggctACCAATCTCA-TGCCTTAGAGATCAGGATGGCCTCCCT-CCCATGTGGATCACACTCATTTTTCTAACTTAGTACTTCCCAAGGAAAGGTAAAGTTGGCCTCACTGTCCAGAGCACAGCAatgcattcagcaa-atgtctacgaagcagcttctatagaccag-caac--tgctaactcgtgaagagg-ggccccttgccatcaaggcacttacagtcaagggagggaagctgaaagtaagcTGCTGAACACACGGAGGGAGTGAGATG-----GGACAGCGATGGAAACAGA-----TAAAGGGGGCTTCAGGGGAGACACCAGCCCAGGAGGAAAACCTTGCAGCAGGTAAGTTCCAACGTGACAGATTCTGGTACAGGGAATGCAGAGCTGGCCTCATTCTGTGAGATGCTGCCCAGGACTTGGTGAAGGCCTCTCAGTGCTGGAGACACAGCTCC-TCCAGGACGGCAGAGTGATCATGTCACACCCTGGCCTGGATGGCCCTCCCTGCAGCCCCAGGCCAGGCTGGACACTGTGCAGCTCCCATGGAGCTCCTTCCTCCTCCTGAACTCT-GCTGCTCCCTCAGCCTGGACTTCTCTTTATGCCCACTCTTGGCTCTTGCCTGTCCTGAACATTTTAATCCAGCTGCCACCTC-C-CCTGCCACA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35029982 1180 + 104879549 TCCGTCTT-----------TGG--------------------------------------TGCCACCTGAGATGGCAGCAAGCCCACT-GTGCAGGTAGATGGAGGCCTGGCCTGCTCAGCAGCTCAGAACTCACCTCCAGGATGAGGTCCCCTGGCACGAGGCCGTCAGGACCCTTGGCAGGACTGTCATCCTCCACCTCGGCCACAAACACCCCATGCAGGTTCCCACCACATAAGTGCACCCCAAGCTCCAGCTGGGACTTTTTGATGAAGACAACGCGTGGCTCCAGGGTCTTCTTGTTGGCATCTCCCACAATCCTTTCAGGAAA-AAAACAAAGTTCCTCAACTGTGCACAA----GGAGGAGGCACAAAAAGGCAAAGCAGTGGCCAATGTCCTAACTGCTTTCTGCCT--GCTtcttggggt-ctcagaaccacagggagctgagaggtggcctctag-----ttctactggctcggcattcagggcaggatg-ctaaggt--gcactg---gagatgaaggcaagaccccaggtcc-aaagccagttgg-gatggcagtcaaaaccgtaaat------cagtgc-ccctgctcccaggcccggctatcAATCTCA-TGTCTTAGAGATCAGGATGGCCTCCCT-CCCATGTGGATCACACTCATTTTCCTAACTTAGTACTTCCTAGGGCAAGGTAAAGTTGGCCTCACTGTCCAGAGCACAGAAatgcattcagcaa-atgtctacgaagcagcttctatagaccag-caac--tgctaactcgtgaagagg-ggccccttgccatcaaggcacttacaatcaagggaggaaagctgaaagtaagctgctgaacacatggagggagtgagatg-----ggacagcaatggaaacaga-----taaagggggcttcaggggagACGCCAGCACGGGAGGAAAACCAGGCAGCAGGTAAGTTCCAATGTGACAGACTCTGGTATAGAGAATGCAGAGCTGGCCTCATTCTGTGAGATGCTGCCCAGGGCTTGGTGAAGGCCTCTCAGTTCTGGAGACACAGCTCC-TCCAGGACGGCAGAGTGATCATGTCACACCCTGGCCTGGATGGCCCTCCCTGCAGCCCCAGGCCAGGCTGGATGCTGTGCAGCTCCCATAGAGTTCCTTCCTCCTCCTGAGTTCT-GCTGCTCCCTCGGCCTGGACTTCTCTTTATGCCCACCCATGGCTCTTGCCTGTCCTGAACACTTTAATCCAGCTGCCACCTC-C-CCTG----- i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73823369 1068 - 130959383 TCTGTCTT-----------TGG--------------------------------------TGCCACCTGAGATGGCAGCAAGCCACCTGGGGCAGGTAGATGGAGGCCTGGCCTACTCAGCAGCTCAGAACTCACCTCCAGGATGAGGTCCCCTGGCACGAGGCCGTCAGGACCCTTGGCAGGACTGTCATCCTCCACCTCAGCCACAAACACCCCATGCAGGTTCCCACCACACAAGTGCACCCCAAGCTCCAGCTGGGACTTTTTGATGAAGACAACGCGTGGCTCCAGGGTCTTCTTGTTGGTATCTCCCGCGATCCTTTCAGGAAACAAAACAAAGTTCCTCAACTGTGCACAAGGAGGGAGGAGGCACAAAAAGACAAAGCAGTGGCCAGGGTCTTAATCGCTTTCTGCCT--GCTTCTTGGGTT-CTCAGAACCACAGGGAGCTGAGAGGTGGCCGCCAG-----TTCTACTGGCTCGGCGTTCAGGGCAGGATG-CTGAGGT--GCACTG---GAGATGAAGGCAAGACCCCAGGTCC-AAAGTCAGTTGA-ATGGGGAGTCAAAACC------------CAG--------GCTCCCAGGCCCGGCTATCAATCTCA-TGCCTTAGAGATCAGGATGGCCTCTCT-CCCATGGGGATCACACCCATTTTC----CTTAGTTCTTCCCAAGGAAAGGTAAAGTTGGCCTCACTGTCCAGAGCACAGCAatgcattcagcaa-atgtctaccaagcaacttctatagaccaaggaac--tgctaactcgtgaagagg-aaccccttgccatcaaggcacttacaatcaagggagggaagctgaaagcaagcTGCTGAACACATGGAGGGAGAGAGATG-----GGACAGCGATGGAAACAGA-----TAAAGAGGGCTTCAGGGGAGATGCCAGCCTGGGAGGAAAACCTTGCAGCAGGTAAGTTCCCA-GTGACAAACTCTGGTATAGAGAATGCAGAGCTGGCCTCATTCTGTGAGATGCTGCCCAGGGCTTAGTGAAGGCCTCTCAGTGCTGGAGACACAGCT---------------------------------------------------------------------------------------------------CTTCCTCCTCCTGAACTCT-GCTGCTCCCTTGGCCTGGACT--------TGCCCACCCCTGGCTCTTGCCTGTCCTGAACATTTTAATCCAGCTGCCACCTC-C-CCTGCCACA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75384657 1067 - 133195287 TCTGTCTT-----------TGG--------------------------------------TGCCACCTGAGATGGCAGCAAGCCACCTGGGGCAGGTAGATGGAGGCCTGGCCTACTCAGCAGCTCAGAACTCACCTCCAGGATGAGGTCCCCTGGCACGAGGCCGTCAGGACCCTTGGCAGGACTGTCATCCTCCACCTCAGCCACAAACACCCCATGCAGGTTCCCACCACACAAGTGCACCCCAAGCTCCAGCTGGGACTTTTTGATGAAGACAACGCGTGGCTCCAGGGTCTTCTTGTTGGTATCTCCCGCAATCCTTTCAGGAAACAAAACAAAGTTCCTCAACTGTGCACAAGGAGGGAGGAGGCACAAAAAGACAAAGCAGTGGCCAGGGTCTTAATCGCTTTCTGCCT--GCTTCTTGGGTT-CTCAGAACCACAGGGAGCTGAGAGGTGGCCGCCAG-----TTCTACTGGCTCGGCGTTCAGGGCAGGATG-CTGAGGT--GCACTG---GAGATGAAGGCAAGACCCCAGGTCC-AAAGTCAGTTGA-ATGGGGAGTCAAAACC------------CAG--------GCTCCCAGGCCCGGCTATCAATCTCA-TGCCTTAGAGATCAGGATGGCCTCTCT-CCCATGGGGATCACACCCATTTTC----CTTAGTTCTTCCTAAGGAAAGGTAAAGTTGGCCTCACTGTCCAGAGCACAGCAatgcattcagcaa-atgtctaccaagcaacttctatagaccaaggaac--tgctaactcgtgaagagg-aaccccttgccatcaaggcacttacaatcaagggagggaagctgaaagcaagcTGCTGAACACATGGAGGGAGAGAGATG-----GGACAGCGATGGAAACAGA-----TAAAGAGGGCTTCAGGGGAGATGCCAGCCTGGGAGGAAAACCTTGCAGCAGGTAAGTTCCCA-GTGACAAACTCTGGTATAGAGAATGCAGAGCTGGCCTCATTCTGTGAGATGCTGCCCAGGGCTTAGTGAAGGCCTCTCAGTGCTGGAGACACAGCT---------------------------------------------------------------------------------------------------CTTCCTCCTCCT-AACTCT-GCTGCTCCCTTGGCCTGGACT--------TGCCCACCCCTGGCTCTTGCCTGTCCTGAACATTTTAATCCAGCTGCCACCTC-C-CCTGCCACA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73249425 1050 - 125196307 TCTGTCTT-----------TGG--------------------------------------TGCCACCTGAGATGGCAGCAAGCCACCTGGGGCAGGTAGATGGAGGCCTGGCCTACTCAGCAGCTCAGAACTCACCTCCAGGATGAGGTCCCCTGGCACGAGGCCGTCAGGACCCTTGGCAGGACTGTCATCCTCCACCTCAGCCACAAACACCCCATGCAGGTTCCCACCACACAAGTGCACCCCAAGCTCCAGCTGGGACTTTTTGATGAAGACAACACGTGGCTCCAGGGTCTTCTTGTTGGTATCTCCCGCAATCctttcaggaaacaaaacaaagttcctCAACTGTGCACAAGGAGGGAggaggcacaaaaagacaaagcaGTGGCCAGTGTCTTAATCGCTTTCTGCCT-------------------GAACC-CAGGGAGCTGAGAGGTGGCCGCCAG-----TTCTACTGGCTCGGCGTTCAGGGCAGGATG-CTGAGGT--GCACTG---GAGATGAAGGCAAGACCCCAGGTCC-AAAGTCAGTTGA-GTGGGAAGTCAAAACC------------CAG--------GCTCCCAGGCCCGGCTATCAATCTCA-TGCCTTAGAGATCAGGATGGCCTCCCT-CCCATGGGGATCACACCCATTTTC----CTTAGTTCTTCCTAAGGAAAGGTAAAGTTGGCCTCACTGTCCAGAGCACAGCAACGCATTCAGCAA-ATGTCTACCAAGCAACTTCTATAGACCAA-GAAC--TGCTAACTCGTGAAGAGG-AGCCCCTTGCCATCAAGGCACTTACAATCAAGGGAGGGAAGCTGAAAGTAAGCTGCTGAACAcatggagggagagagatg-----ggacaGCGTTGGAAACAGA-----TAAAGAGGGCTTCAGGGGAGATGCCAGCCTGGGAGGAAAACCTTGCAGCAGGTAAGTTCCCA-GTGACAAACTCTGGTATAGAGAATGCAGAGCTGGCCTCATTCTGTGAGATGCTGCCCAAGGCTTAGTGAAGGCCTCTCAGTGCTGGAGACacagct---------------------------------------------------------------------------------------------------cttcctcctcctgaaCTCT-GCTGCTCCCTTGGCCTGGACT--------TGCCCACCCCTGGCTCTTGCCTGTCCTGAACATTTTAATCCAGCTGCCACCTC-C-CCTGCCACA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72081321 1166 - 125710982 TCTGTCTT-----------TGG--------------------------------------TGCCACCTGAGATGGCAGCAAGCCACCTGGGGCAGGTAGATGGAGGCCTGGCCTACTCAGCAGCTCAGAACTCACCTCCAGGATGAGGTCCCCTGGCACGAGGCCGTCAGGACCCTTGGCAGGACTGTCATCCTCCACCTCAGCCACAAACACCCCATGCAGGTTCCCACCACACAAGTGCACCCCAAGCTCCAGCTGGGACTTTTTGATGAAGACAACGCGTGGCTCCAGGGTCTTCTTGTTGGTATCTCCCGCAATCCTTTCAGGAAACAAAACAAAGTTCCTCAACTGTGCACAAGGAGGGAGGAGGCACAAAAAGACAAAGCAGTGGCCAGTGTCTTAATCGCTTTCTGCCT--GCTTCCTGGGTT-CTCAGAACCACAGGGAGCTGAGAGGTGGCTGCCAG-----TTCTACTGGCTCGGCGTTCAGGGCAGGATG-CTGAGGT--GCACTG---GAGATGAAGGCAAGACCCCAGGTCC-AAAGTCAGTTGA-GTGGGGAGTCAAAACC------------CAG--------GCTCCCAGGCCCAGCTATCAATCTCA-TGCCTTAGAGATCAGGATGGCCTCTCT-CCCATGGGGATCACACCCATTTTC----CTTAGTTCTTCCTAAGGAAAGGTAAAGTTGGCCTCACTGTCCAGAGCACAGCAACGcattcagcaa-atgtctaccaagcaaattctatagaccag-gaac--tgctaactcgtgaagagg-agccccttgccatcaaggcacttacaatcaagggagggaagctgaaagtaagctgctaaacacaTGGAGGGAGACAGATG-----GGACAGCGATGGAAACAGA-----TAAAGAGGGCTTCAGGGGAGATGCCAGCCTGGGAGGAAAACCTTGCAGGAGCTAAGTTCCCATGTGACAAACTCTGGTATAGAGAATGCAGAGCTGGCCTCATTCTGTGAGATGCTGCCCAGGGCTTAGTGAAGGCCTCTCAGTGCTGGAGACACAGCTCC-TCCAGGACTGCAGAGTGATCATGTCGCACCCTGGCCTGGATGGCCCTCCCCACAGCCCCGGGCCAGGCTGGATGTTTTGCAGCTCCCACGGGGCTCCTTCCTCCTCCTGAACTCT-GCTGCTCCCTCGGCCTGGACT--------TGCCCACCCCTGGCTCTTGCCTGTCCTGAACATTTTAATCCAGCTGCCACCTC-C-CCTGCCACA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75538174 1222 - 121768101 TCCATCTTGCCACCTGAGATGGCAGCAAGCCCTGTGCAGGAGAGGTTGTACTCTCCATCTTGCCACCTAAGATGGCAGCATGCCCACT-GTGCAGGTTGACAGAGGCCTGGCCTGCTCAGCAGCTCAGAACTCACCTCCAGGATGAGGTCCCCTGGCACGAGGCCATCAGGACCCTTGGCAGGACTGTCATCCTCCACCTCGGCCACAAACACCCCATGCAGGTTCCCACCGCACAAGTGCACCCCAAGCTCCAGCTGGGACTTTTTGATGAAGACAACACGTGGCTCTAGGGTCTTCTTGTTGGTATCGCCCGCAATCCTTTCAGGAAAAAAAACTAAGTTCCTCAATTGTGCAAAAGGAGGGAGGAGGCGCTAAAAGAAAAAGCAGAGGCCAATGCCCTGACCGCTTTCTGCCT--GCTTGCTGGGGT-Ctcagaaccacagggagctgagaggtggcctctgg-----ttctactggtttggggtgcagggcaggacacctgaggt--gcactg---gagatgaaggcaagaccccaggttc-aaagccagttag-ggggagagtctaaaccacacat------cagtgc-ccctgctcccaggcccggctatcactctca-agccTTAGAGATCAGGATGTCCTCCCT-CCCATATGGATCACACTCACTTTCCTAACTTAGTTCTTCCTAAGAAAGGTTAAAGTTGGCCTCACTGTCCAGAGCACAGCAACATGTTCTGC-A-ATGTCTACCAAGCAGCTGCTGTAGACCAG-GAAC--TGCTAACTCGTAAAGAGG-GGCTCCTTGCCATCAAGGCACTTACACTCAAGGAAGAGAAGCTGAAAGTAAGCTGCTGAACATATGG----------------------AACAACAGAAACAGA-----TAAAAGGAGCATAAGGGGAGACGCCAGCCCGGGAGGAAAACCTTGCAGCAGGTAACTTCCAATGTGACAGACTCTGGCAGAGAGAGTGCAGAGCTGGCCTCATTCTGTGAGATGCTGCCCAGAGCTTGGCGAAGGCCCGTCAATGCTGGAGACACGGCTCC-TCCAGGACTGCAGATTGATCACGCCGCACCCTGGCCTGGGTGGCCCTCCCTGCAGCCCCAGGCCAGGCTGTATGCTGTGCAGCTCCCACAGGGCTCCTTCCTCCTCCTGAACACC-GCTGCTCCCTTGGCCTGGACTTCCCTTTATGCTCACCCTTGGCTCTTATCTGGCCTGAACATTTTAATCCAGCTGCCGCCTC-C-CTTGCCACA i calJac3.chr12 C 0 C 0 s mm10.chr14 24148128 979 + 124902244 TCCATATC-----------CTG--------------------------------------TGTCATGTGAAAGGACA-CAAGCTGACA-ACACATGAGCAT---GGCCTGGCATACACAATGG--AAGAACTCACCTCAAGGATGAGGTCTCCTGGGACGAGGCCATCAGGACCCTTGGCAGGACTGTCATCTTCCACTTCGGCCACAAACACTCCGTGCAGGTTCCCACCACACAAGTGCACCCCCAGATCCAGCTGGGATTTCTTGATGAAAACAATGCGGGGATCAGGGGTCTTCTTGGTGGTATCTCCCACACTCCTTTTGGGAAGGAAAACGAAGTCCTTAA--TGCATACAAGGAGAGGGGCAGACTGAGGGAAGAAAGTCATGGCCAATGCCCTGCCTGCTTGCTTCAC--AGGTCTGGGCTTCCTGAGAGCCAAAGG-----GTGAGTTGGTCACAGGCTCTCTTCTGTTGAGTCA--CTACAGGATCGGAGG-CTGAGGGTAGCAATGTGAGAGACAGAAGAAAG-----AGGGCA-ACAAACCATTCA-GAGAGAAGACGAGAAAGCCAGTCGGGGACAGGGCACCATGCTTCT-GGCCCAGCTGTC--CCTCAGTGCCTTAGGAGACATG----CCTTCCT--------GGACTGAGCTTGCCTGC----C--------------------------TTGGCCTCCCTGTTTACAG----ACAGCTCACTCGGTGACACACCT---GAGCAGTTTCTA---------CGAC------AACTCAAGCAGGGG-----TCTCACCCTCAAGA-ACT-------------GAAGAGCCACAGGTGAGTCTGGGAACACAGTGAGGAAGCCAGACACCCATGGACA-CCCTGAACATGGACACCCTGAATAGGATATAAAAGTAGAACCCAGCCCTGG-TGACAATCTGCCTACAATGAAGTTCCAGTAGGAGTGTCCCCAG----------GCAGAGCT-GCCTCAATCTGCATGACACTG------GGTTAACACAAGGCTCCCA----TAAAAATTCTTCTCC-TCCAG----------CTACCATTCTGTTCCCTTGCTTA----------------------------------------------------------------TCCAAGAGACCCA-GCTGCTC------ACAGGAAA--------TGTCCAC------------------------------ACCCAGCTGACAACTC-TGGCAGCCACA i mm10.chr14 I 52 I 19 s canFam3.chr4 27702860 973 + 88276631 TCTGCCTC-----------CCG--------------------------------------TGCCAC---------------------------------------------------CGGCTGCTCAGAACTCACCTCGAGGATGAGGTCCCCCACCACAAGGCCGTCAGGGCCCTTGGCAGGACTGTCATCCTCCACCTCAGCCACAAACACCCCGTGCAGGTTCCCTCCACATAAATGGACTCCAAGCTCCAGCTGGGACTTTTTGATGAAGACCACACGTGGCTCTGGAGTCTTCTTGTTGGCATCTCCCACCATCC-TTCAGGAACGAAAATAAAGTCCCTCAATCACACACGG-CGGCGAGCTGGGTGTCAAAGACTACAGAGTCCCTAACGCCCTGACAGTTTTCCTCTGAGGTCTCCTGGTGT-CCC-------------------ATCTGGGCTCTGG-----TTCTAGCGACTTAGTGTAC-GGGCTGGATG-CTGAGGT--TTGTC----GAGGTGAAAACATGGCCCCAGCTGAGAGAGCCA------GCGGGGGATCGAA--CAGAAAT------AAATGC-CCCTGCTTTCTGGCCCAGCTGTCAGTCGAG-TGCCATA--------GGCGGCCTCTCTTCCCAGCTGGACTGCACTTGTTCTCCTAACCCTGCTCTGCCTAAGAAAAGTTAGAGCTGGCCTCACAGTCCAGGGCACCACAGACCACTTGGC-A-AGGTTTGCAGAGCAGCTTCTCTGGCCCAG-GGACTGTGCTTAAGCATGAAGAGGGGGCCGCGTGCCGTCAAGGAACTCACAAAGCAGCAAGGGAGAC---------ACCGGCAAGCACGCTGGGAAGAGGAAATA-----GGACGGTGACGGGGACTGA-----TG-AGGGGACCTCAGGGGACAGGCCAGCTGTGA---------CTCCGGCGGGCAAGTCCCAATGTGACGGATCCAGG-GCAAAGAGCACAGGGCTGGCTACATTCCCTG-----------------------------------GCCAAGGAAACAGCTCTGTCCAGGATGACAGGATGGCTGCTGCGTGC-------------------------------------------------------------------CTGCCTCCTCCTGACCTCTCTCCACACCCACCG----------------TATGCACAGCTGACCCCTGCTCACCCTGAACGCGTTGACTTAACTGTCACTGCTC-CCTGCCACA i canFam3.chr4 C 0 C 0 a score=93504.000000 s hg38.chr10_KI270825v1_alt 49339 45 + 188315 CTCCAGTGATCTTCCTGCCTGCTCTGCGGCGGCCGGCAGTGCCCT- s panTro4.chr10 76420060 45 + 133524379 CTCCAGTGATCTTCCTGCCTGCTCTGTGGCGGCCAGCAGTGCCCT- i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76088119 45 - 133410057 CTCCAGTGATCTTCCTGCCTTCTCTTCGGCGGCCAGCAGTGCCCT- i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35031162 43 + 104879549 --CCAGTGATCTTCCTGCCTGCTCTGCGGCGGCCAGCAGTGCCCT- i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73824437 33 - 130959383 CTCCAGTGATCTTCCTGC-------GTGGCGGCCAGCAGT------ i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75385724 33 - 133195287 CTCCAGTGATCTTCCTGC-------GTGGCGGCCAGCAGT------ i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73250475 33 - 125196307 CTCCAGTGATCTTCCTGC-------GCGGCGGCCAGCAGT------ i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72082487 33 - 125710982 CTCCAGTGATCTTCCTGC-------GCGGCGGCCAGCAGT------ i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75539396 45 - 121768101 CTCCAGTGATCTTCCTGCCTGTTCTGCAGCGGCCAGCAGTGCCCT- i calJac3.chr12 C 0 C 0 s canFam3.chr4 27703833 38 + 88276631 --------CTCTCGCTGACTGCTCCGTCGTGGCCTGTACTGGCCCT i canFam3.chr4 C 0 C 0 e mm10.chr14 24149107 19 + 124902244 I a score=8626231.000000 s hg38.chr10_KI270825v1_alt 49384 2422 + 188315 CCCAGCACCCTGACTCTGCTGCAC---GTGCCCGG-CACTGGTCTGCCACC---------------TCATTGGGGGAAGCACTGCTGTGGGTGGCCAGAGCCC-AGGGCCTGGCCGGGTGATGACTGTGGGAATGTGTCCAAAGACAGACTCAGAAAGCGAGTgaacaagaaaaggagaagagaaagagaagatgcagggg-aaaaaacaagtcaa-tagaaaacaggagaaaaagagaaaggaaa----------agaGAGAGTAGGGAA------GGAAAAAAGGAATGCCGTGC-TCCCGGCCCAACTCCTGAAGACCTGGTGTGCGGCCTGCAGCACA--TGAGGCCAGC----TGCCCAGTGCCCACGCCACTTGGAGAATGTGCT-CAGCCCCACCCAGCCGAAGCGGACACAGGGAAGGCTCACAGCA-ACGTCTGCTGACCTGGAGC------TGCTCTGCTTGGCTGGGGGGGTGCTAGGCCCCTCGTCCTGCTCCATCAGTGGGTCGATGACAGATGGATGCTCCGGGGTGGTGGTGCCACTGCCCTGGAGAGTGGAGT---GGGTACCGGCAGGGTCCAGGTGTGAGCTGGAGGCGGAGGACAGGAGGGATAAGGAG-------CAGTACGAAGCCACCCAGAGCCACCCCCACTCCTGTGGCAACTAGATCTGAGCTATAAATGGGGACCAGGTCACATAGCCCTGCACCCTGTGCCCTGAGCAGAGCAGACACATTAGAAGCCTGGACCCATGACATC--------------CACCTGTCCTCTCC-CCTCCACCTGTCCTCAGCTCAGGGGCCCTCTCCAA----AGGCATCTGACCTCAGGAAGCTGTGAGCATCCTGTCTCTTTTCCTCTGCCTGTGCATCCCATCTCTCC-TGCTGAGCT-TGTGGCGCAGCACTGCAGGGCATGCCTCCCCTTCTTT--TC---TGCCCTTCAACCCACAGCTCAGGGGCAGATACAGACAG-GTGTACAGCATCTGCTCCTGGACAGGGAGCCAAACACTTTGAGTGAGAAT-CCACCCCCGGGGCCACAACTCCTGGCTACCA-TGG--GCCCCTGCTGGTCAGGGGGACCACAGCCAT--CTGTT-TCCACACCCCA---TTTCAGGAG---------GAGACAGCCTCTCTATATATGCCCCTTTTCCAAAATCCAGGGCTGGTCAACTCTCTCTTTAGCAGCAGTAGGATCCCCAGAACTTACGGCTGGCACCCTGGGTCTCCCTAAAATGAGCAGAGTGCT-----GCTGCACCCACCTCTCCACCCCCAGCCCAGACGG-----CCC----TGGGAGGCCC--GCACTCACCTGGACCGGGAGTGGCTGCTGAGCTGGTGCACGTGGGGGTTGTACTGGGCCAGGATGGTGATGGTATCACACTGCTGCCCGATGATGAGCCGCGCCTGCTGCTCCGTGGCGCTCCGCAGGTTTATGCCGTTGAACTGGGGAAACA-CCAGGA-------------------TGGGCTCAGTGGGGGGGTCGGGGCTGTGGACAGGGAGGAGGCCCTGGGGACTTGGGAGCACTGCTGTTCCCTA-----GGAGGAGGAGA-----------------------------------------------------GGGGGAAGAAGTGCAGGTTTCCATGGGCGCCATGCAGGAGGGCAG-------------------------------------------------CTCCCTCTCACCTCCAGTAACTGATCCCCATACTCGAGGCCAGCCTGGTGAGCGATGCTCCCCACGGTCACCTTGGAGACGTAGATGCCGCCCTTCTCTCCACTCACGATGGAGATGCCCAGCGGCTCTGAGCCCTTCTGCACCTTCACGTGGCGTGGCTCCTCCACATAAGGCCTAAGGA-AAAG--TCAAAAGTTTCGGGGACTCAGGGTCAA-ACAAAAGGGTTGGGGAGAGCCTGAGCT-----CTCTGATCAGGCATATGATCTGACAGTGC-AGAAAGGGCCCCGAGC--CTGGATGCTCCCATTG-TGACACAGCTACATGGGGACATGGTGG-GCCCACCCCTGTGTGACAAACGATCACATTCCCACAGCCTCACGCAACACGAGCACAGCACACGCAGA----CACGCAACCACCCAG-GCCAAAGACACAGAGAACGGTCCGTGTGAACTATAA-----------------------ACACTGATACATG-----------TGGATTTTCATTACAGGAGAGGAGCTGCC---CCACAATATGCAAT-TACAAACTCT-------GG-GGGGTCTTGAGATGCCCTCCGAGGAAAAGAGATGGCTCCTGGGATGACATTCCATCCTAA-GGGGGCAACAGAAAATAATCCAGTTTTATGTTTACTGGCTACACAGAGTGATGCAAACTGGTCACGGAAATTAAGCTGCTGCAGACCCAAGCCTTT-GTAAAGGGAGAAG----GCTGGGAGCAAGGCTGCAGCCATGCACTTGCT-GCCCTGGG-----GCTGTACAGTGCACCCAAGGGCGCCG-GGGCAGGGGCTCGGCA-GGGAGCCTCTGGGCAGGCCAACTGCATG---------GTGGAAGACCTGGGCCTGGTGGCCACGGGCAGCCTCAGAAGAGATCTGTGGTGGCAGAGACATCTGGAAGGTGACAAAGGTTAGAA-AGAAGATAAGGGACGCTCAGAGGAGAAAGACA s panTro4.chr10 76420105 2422 + 133524379 CCCAGCACCCTGACTCTGCTGCAC---GTGCCCGG-CACTGGTCTGCCACC---------------TCGTTGGGGGAAGCACTGCTGTGGGTGGCCAGAGCCC-AGGGCCTGGCCGGGTGATGACTGTGGAAATGTGTCCAAAGACAGACTCAGAAAGCGAGTGAACaagaaaaggagaagagaaagagaagatgcagggg-aaaaaacaagtcaa-tagaaaacaggagaaaaagagaaaggaaa----------agagagagtagggaa------ggaaaaaaggaATGCCGTGC-TCCCGGCCCAACTCCTGAAGACCTGGTGTGCGGCCTGCAGCACA--TGAGGCCAGC----TGCCCAGTGCCCACGCCACTTGGAGAATGTGCT-CAGCCCCACCCAGCCGAAGCGGACACAGGGAAGGCTCACAGCA-ACATCTGCTGACCTGGAGC------TGCTCTGCTTGGCTGGGGGGGTGCTAGGCCCCTCGTCCTGCTCCATCAGTGGGTCGATGACAGATGGATGCTCCGGGGTGGTGGTGCCACTGCCCTGGAGAGTGGAGT---GGGCACCGGCAGGGTCCAGGTGTGAGCTGGAGGCGGAGGACAGGAGGGATAAGGAG-------CAGTACGAAGCCACCCAGAGCCACCCCCACTCCTGTGGCAACTAGATCTGAGCTATAAATGGGGACCAGGTCACATAGCCCTGCACCCTGTGCCCTGAGCAGAGCAGACACATTAGAAGCCTGGACCCATGACATC--------------CACCTGTCCTCTCC-CCTCCACCTGTCCTCAGCTCAGGGGCACTCTCCAA----AGGCATCTGACCTCAGGAAGCTGTGAGCATCCTGTCCCTTTTCCTCTGCCTGTGCATCCCATCTCTCC-TGCTGAGCT-TGTGGCGCAGCACTGCAGGGCATGCCTCCCCTTCTTT--TC---TGCCCTTCAACCCACAGCTCAGGGGCAGATACAGACAG-GTGTACAGCATCTGCTCCTGGACAGGGAGCCAAACACTTTGAGTGAGAAT-CCACCCCCGGGGCCACAACTCCTGGCTACCA-TGG--GCCCCTGCTGGTCAGGGGGACCACAGCCAT--CTGTT-TCCACACCCCA---TTTCAGGAG---------GAGACAGCCTCTCTATATATGCCCCTTTTCCAAAATCCAGGGCTGGTCAACTCTCTCTTTAGCAGCAGTAGGATCCCCAGAACTTACGGCTGGCACCCTGGGTCTCCCTGCAATGAGCAGAGTGCT-----GCTGCACCCACCTCTCCATCCCCAGCCCAGACGG-----CCC----GGGGAGGCCC--GCACTCACCTGGACCGGGAGTGGCTGCTGAGCTGGTGCACGTGGGGGTTGTACTGGGCCAGGATGGTGATGGTATCACACTGCTGCCCGATGATGAGCCGCGCCTGCTGCTCCGTGGCGCTCCGCAGGTTTATGCCGTTGAACTGGGGAAACA-CCAGGA-------------------TGGGCTCAGTGAGGGGGTCGGGGCTGTGGACAGGGAGGAGGCCCTGGGGACTTGGGGGCACTGCTGTTCCCTA-----GAAGGAGGAGA-----------------------------------------------------GGGGGAAGAAGTGCAGGTTTCCATGGGCGCCATGCAGGAGGGCAG-------------------------------------------------CTCCCTCTCACCTCCAGTAACTGATCCCCATACTCGAGGCCAGCCTGGTGAGCGATGCTCCCCACGGTCACCTTGGAGACGTAGATGCCGCCCTTCTCTCCACTCACGATGGAGATGCCCAGCGGCTCTGAGCCCTTCTGCACCTTCACGTGGCGTGGCTCCTCCACATAAGGCCTAAGGA-AAAG--TCAAAAGTTTTGGGGACTCAGGGTCAA-ACAAAAGGGTTGGGGAGAGCCTGAGCT-----CTCCGATCAGGCATATGATCAGACAGTGC-AGAAAGGGCCCCGAGC--CTGGATGCTCCCACTG-TGACACAGCTACATGGGGACATGGTGG-GCCCACCCCTGTGTGACAAACGATCACATTCCCACAGCCTCACGCAACACGAGCACAGCACACGCAGA----CACGCAACCACCCAG-GCCAAAGACACAGAGAACGGTCCGTGTGAACTATAA-----------------------ACACTGATACACG-----------TGGATTTTCATTACAGGAGAGGAGCTGCC---CCACAATATGCAAT-TACAAACTCT-------GG-GGGGTCTTGAGATGCCCTCCAAGGAAAAGAGATGGCTCCTGGGATGACATTCCATCCTAA-GGGGGCAACAGAAAATAATCCAGTTTTATGTTTACTGGCTACACAGAGTGATGCAAACTGGTCACGGAAATTAAGCTGCTGCAGACCCAAGCCTTT-GTAAAGGGAGAAG----GCTGGGAGCAAGGCTGCAGCCATGCACTTGCT-GCCCTGGG-----GCTGTACAGTGCACCCAAGGGCGCCG-GGGCAGGGGCTCGGCA-GGGAGCCTCTGGGCAGGCCAACTGCATG---------GTGGAAGACCTGGGCCTGGTGGCCACGGGCAGCCTCAGAAGAGATCTGTGGTGGCAGAGACATCTGGAAGGTGACAAAGGTTAGAA-AGAAGATAAGGGATGCTCAGAGGAGAAAGACA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76088164 2398 - 133410057 CCCGGCTCCCTGACTGTGCTGCAC---ATGCCCGG-CACTGGTCTGCCACT---------------TCGCTGGGGGAAGCACTGCTGTGGGTGGC-----------------------TGATGACTGTGGGAATGTGTCCAAAGACAGACTCagaaagcaagtgaataagaaaaggagaagacaaagagaagatgcaggggaaaaaaacaagtcaa-tagaaaacaggagaaaaagagaaaggaaa----------agagagagtagggag------ggaaaaaaggaaTGCCGTGC-TCCTGGCCCAACTCCTGAAGACCTGGTGTGTGGCCTGCAGCACA--TGAGGCCAGC----TGCCCAGTGCCCACGCCACTTGGAGAATGTGCT-CAGCCCCACCCAGCCGAAGTGGACACAGGGAAGGCTCACAGCA-ACATATGCTGACCTGGAGC------TGCTCTGCTTGGCTGGGGGGGTGCTAGGCCCCTCGTCCTGCTCCATCAGTGGGTCGATGACAGAGGGATGCTCCGGGGTGGTGGTGCCACTGCTCTGGAGAGTGGAGT---GCGTACTGGCAGGGTCCAGGTGTGAGCTGCAGGCGGAGGACAGGAGGGATAAGGAG-------C--TACAAAGCCACCCAGAGCCACCCCCACTCCTGTGGCAACTAGGTCTGAGCTATAAATGGGGACCAGGTCACACAGCCCTACACCCTGTGCCCTGAGCAGAGCAGACACATTAGAAGCCTGGACCCATGACATC--------------CACCTGTCCTCTCC-CCTCCACCTGTCCTCAGCTCAGGGGCCCTCTCCAA----AGGCATCTGGCCTCAGGAAGCTGTGAGCATCCTGTCCCTTTTCCTCTGCCTGTGCATCCCATCTCTCC-TGCTGAGCT-TGTGGTGCAGCACTGCAAGGCGTTGCTCCCCTTCTTT--TC---TGCCCTTCAACCCACAGCTCAGGGGCAGATACAGACAG-GTGTACAGCGTCTGCTCCTGGACAGGGAGCCAAACACTTTGAGCAAGAAT-CCACCCCCAGGGCCACAGCTCCTGGCTACCA-TGG--GCCCCTGCTGGTCAGGGGGACCACGGCCAT--CTGTT-TCCACACCCCA---TTTCAGGAG---------GAGACAGCCTCTCTATATATGCCCCTTTTCCAAAATCCAGGGCTGGTCAACTCTCTCTTTAGCCGCAGTAGGATCCCCAGAACTTACGGCTGGCACCCTGGGTCTCCCTGCAATGAGCGGAGTGCT-----GCTGCACCCACCTCTCCACCCCCAGCCCAGATGG-----CCT----GGAGAAGCCC--GCACTCACCTGGACCGGGAGTGGCTGCTGAGCTGGTGCACGTGGGGGTTGTACTGGGCCAGGATGGTGATGGTATCACACTGCTGCCCGATGATGAGCCGTGCCTGCTGCTCCGTGGCGCTCCGCAGGTTTATGCCGTTGAACTGGGAAAACA-CCAGGA-------------------TGGGCTCAGTGAGGGGGTCGGGGCTGTGGACAGGGAGGAGGCCCTGGGGACTTGGGAGCACTGCTGTTCCCTA-----GGAGGAAGAGA-----------------------------------------------------CGGGGAAGAAGTGCAGGTTTCCATGGGCGCCATGCAGGACAGCAG-------------------------------------------------CTCCCTCTCACCTCCAGTAACTGATCCCCGTACTCGAGGCCGGCCTGGTGAGCAATGCTCCCCACGGTCACCTTGGAGACGTAGATGCCACCCTTCTCTCCACTCACGATGGAGATGCCCAGCGGCTCTGAGCCCTTCTGCACCTTCACGTGGCGTGGCTCCTCCATATAAGGCCTAAGGA-AAAG--TCAAAAGTTTCGGGGACTCAGGATCAA-ACAAAAGGGTTGGGGAGAGCCTGAGCT-----CTCCGATCAGGCATATGATCAGACAGTGC-AGAAAGGGCCCTGAGC--CTGGATGCTCCCACTG-TGACACAGCTACATGGGGACACGGTGG-GCCCACCCC-GTGTGACAAACAATCACATTCCCACAGCCTCACGCAACAAGAGCACAGCACACACAGA----CGCGCAACCACCCAG-GCCAAAGACACAGAGAACGGTCCGTGTGAACTATAA-----------------------ACACTGATACACG-----------TGGATTTTGATTACAGGAGAGGAGCTGCC---CCACAATATGCAAT-TACAAACTCG-------GG-GGGGTCTTGAGATGCCCTCCAAGGAAAAGAGATGGCTCCTGGGATGACATTCCATCCTAA-GGGGGCAACAGAAAATAATCCAGTTTTATGTTTACTGGCTACACAGAGTAATGCAAACTGGTCACAGAAATTAAGCTGCTGCAGACCCAAGCCTTT-GTAAAGGGAGAAG----GCTGGGAGCAAGGCTGCAGCCATGCACTTGCT-GCCCTGGG-----GCTGTACAGTGCACCCAAGGGTGCAG-GGGCAGGGGCTCAGCA-GGGAGCCTCTGGGCAGGCCAACCGCATG---------GTGGAAGACCTGGGCCTGGTGGCCACATGCAGCCTCAGAAGAGATCTGTGGTGGCAGAGACATCTGGAAGGCGACAAAGGTTAGAA-AGAAGATAAGGGACGCTCAGAGGAGAAAGACA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35031205 2419 + 104879549 CCTGGCACCCTGACTGTGCTGCAC---ATGCCCAG-CACTGGTCTGCCACC---------------TCTTTGGGGGAAGCACTGTCGTGGGTGGCCAGAGCCC-AGGGCTTGGCTGGGTGATGACTGTGGGAATGTGTCCGAAGACAGACTCagaaagcaagtgaataagaaaaggagaagagaaagagaagatgcagggg-aaagaacaagtcaa-tagaaaacaggagaaaaagagaaaggaaa----------agagagagcagtgag------ggaaaaaaggaaTGCCGTGC-TCCCGGCCCAACTCCTGAAGACCTGGTGTGTGGCCTGCAGCACA--TGAGGCCAGC----TGCTCAGTGCCCATGCCACTTGGAGAATGTGCT-CAGCCCCACCCAGCTGAAGTGGACACAGGGAAGGCTCACAGCA-ACATCTGCTGACCTGGAGC------TGCTCTGCTTGGCTGGGGGGGTGCTAGGCCCCTCATCCTGCTCCATCAGTGGGTCAATGACACAGGGATGCTCCGGAGTGGTGGTGCCACTGCCCTGGAGAGTGGAGT---GGGTACCGGCAGGGTCCAGGTGTGAGCTGGAGACGGAGGACAGGAGGGATAAGGAG-------CAGTACGAAGCCACCAAGAGCCACCCCTGCTCCTGTGGCAACTAGGTCTGAGCTATAAATGGGGACCGGGTCACACAGCCCTGCACCCTGTGCCCTAAGCAGAGCAGACACATTAGAAGCCTGGACCCATGATATC--------------CACCTGTCCTCTCC-CCTCCACCTGTCCTCAGCTCAGGGGCCCTCTCCAA----AGGCATCTGGCCTCA-GAAGCTGTGAGCGTCCTGTCCCTTTTCCTCTGCCTGTGCATCCCATCTCTCC-TGCTGAGCT-TGTGGCACAGCACTGCAGGGCATGCCTCCCCTTCTTT--TC---TGCCCTTCGACCCACAGCTCAGGGGCAGATACAGACAG-GTGTACAGCGTCTGCTCCTGGACAGGGAGCCAAACACTTTGAGCGAGAAT-CCACCCCCGGGGCCACAGCTCCTGGCTACCA-CGG--GCCCCTGCTGGTCAGGGGGACCACAGCCAT--CTGTT-TCCACACCCCA---TTTCAGGAG---------GAGATGGCCTCTCTATATATGCCCCTTTTCCAAAATCCAGGGCTGGTCAACTCTCTCTTTAGCAGCAGTAAGATCCCCAGAACTTACAGCTGGCATCCTGGGTCTCCCTGCAATGAGCGAAGTGCT-----GCCGCACCCACCTCTCCACCCCCAGCCCAGACGG-----CCC----GGGGAGGCCC--GCGCTCACCTGGACCGGGAGTGGCTGCTGAGCTGGTGCACATGGGGGTTGTACTGGGCCAGGATGGTGATGGTATCACACTGCTGCCCAATGATGAGCCGCGCCTGCTGCTCCGTGGCGCTCCGCAGGTTTATGCCATTGAACTGGGGAAACA-CCAGGA-------------------TGGGCTCAGTGAGGGGGTCAGGGCTGTGGACAGGGAGGAGGCCCTGGGGACTTGGGAGCACTGCTGTTCCCTA-----GGAGGAGGAGA-----------------------------------------------------GGGGGAAGAAGTGCAGGTTTCCATGGGCGCCATGCAGGAGGGCAG-------------------------------------------------CTCCCTCTCACCTCCAGTAACTGATCCCCATACTCGAGGCCGGCCTGGTGAGCGATGCTCCCCACGGTCACCTTGGAGACATAGATGCCGCCCTTCTCTCCACTCACGATGGAGATGCCCAGCGGCTCTGAGCCCTTCTGCACCTTCACGTGGCGTGGCTCCTCCACATAAGGCCTAAGGA-AAAG--TCAAAAGTTTCGGGGACTCAGGGTCAA-ACAAAAGGGTTGGGGAGAGCCTGAGCT-----CTCCGATCAGGCATATGATCAGACAGTGC-AGAAAGGGCCCCGAGC--CTGGATGCTCCCATTGTTGACACAGCTACATGGGGACACGGTGG-GCCCACCC--GCGTGACAAAGGATCACATTCCCACAGCCTCACGCAACACGAGCACAGCACACCCAGA----CACGCAACAACCCAG-GCCAAAGACACAGAGAACGGTCCGTGTGAACTATAA-----------------------ACACTGATACACG-----------CGGATTTTCATTACAGGAGAGCAGCTGCC---CCACAATATGCAAT-TACAAACTCC-------GG-GGGGTCTCGAGATGCCCTCCAAGG--AAGAGATGGCTCCTGGGATGACATTCCATCCTAAGGGGGGCAACAGAAAATAATCCAGTTTTATGTTTACTGGCTACACAGAGTGATGCAAACTGGTCACGGAAATTAAGCTGCTGCAGACCCAAGCCTTT-GTAAAGGGAGAAG----GCTGGGAGCAAGGCTGCAGCCATGCACTTGCT-GCCCTGGG-----GCTGTCCAGTGCACCCAAGGGCGCCG-GGGCAGGGGCTCGGCA-GGGAGCCTCTGGGCAGGCCAACCTCATG---------GTGGAAGACCTGGGCCTGGTGGCCACGGGCAGCCTCAGAAGAGATCTGTGGTGGCAGAGACATCTGGAAGGTGACAAAGGTTAGAA-AGAAGATAAGGGACGCTCAGAGGAGAAAGACA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73824470 2433 - 130959383 --------TTTGACTGTGCTGCACACTGTGCCCAG-CACTGGTCTGCCACC---------------TCGTTGAGGGAAGCACTGCTGTGGGTAGCCAGAGCCC-AGGGCCTGGCGGGGTGACGACTGTGGGAATGTGTCCAAAGACAGACTCagaaagcgagtgaatgagaaaaggagaagagaaagagaagatgcagggg-aaagaacaagtcaattagaaaacaggagaaaaagagaaaggaaa------------agagagcagggag------ggaaaaaaggaaTGCTGTGC-TCCCAGCCCAATTCCTGAAGACCTGGTGTGTGGCCTGCAGCATA--TGAGGCCAGC----TGCCCAGTGCCCACGCCACTTGGAGAATGTGCT-CAGCCCCACCCAGCCGAAGTGGACACAGGGAAGGCTCACAGCACACATCTGCTGACCTGGAGC------TGCTCTGCTTGGCTGGGGGGGTGCTAGGCCCCTCGTCCTGCTCCATCAGTGGGTCAACGACAGAGGGATGCTCCGGGGTGGTGGTGCCACTGCCCTGGAGAGTGGAGT---GGGTACCGGCAGGGTCCAGGTGTGAGCTGGAGACGGAGGACAGGAGGGATAAGGAG-------CAGTATAAAGATACCCAGAGCCACCCCTGCTCCTGTGGCAACTAGGTCTGAGCTATAAATGGGGACCGGGTCACACAGCCCTGCACCCTGTGCCCTGAGCAGAACAGACACATTAGAAGCCTGGACCCATGACATCCACCCCAAAGCATGCACCTGTCCTCTCC-CCTCCACCTGTCCTCAGCTCAGGGGCCCCCTCCAA----AGGCATCTGGCCTCGGGGAGCTGTGCGCGTCCTGTCCCTTTTCCTCTGCCTGTGCATCCCATCTCTCC-TGCTGAGCT-TGTGACGCAGCACTGCCGGGCGTGCCTCCCCTTCTTT--TC---TGCCCTTCCACCCACAACTCAGGGGCAGATACAGACAG-GTGTACAGCATCTGCTCCTGGACAGGGAGCCAAACACTTTGAGTGAGAAT-CCACCCCCTGGGCCACAGCTCCTGGCTACCA-CAG--GCCGCTGCTGTTCAGGGGGACCACAGCCAT--CTGTT-TTCACACCCCA---TTTCAGGAG---------AAGACAGCCTCTCTCTATATGCCCCTTTTCCAAAATCCAGGGCTGGTCAATTCTCTCTTTAGCAGCAGTAGGATCCTCAGAACTTGCAGCTGTCACCCTGAGTCCCCCTGCAATGAGTGGAGTGCT-----GCCACACCCACCTCTCCACCCCCAGCCCAGACGG-----CCC----GGGGAGGCCC--GCGCTCACCTGGACCGAGAGTGGCTGCTGAGCTGGTGCACGTGGGGGTTGTACTGGGCCAGGATGGTGATGGTATCACACTGCTGCCCGATGATGAGCCGCGCCTGCTGCTCCGTGGCGCTCCGCAGGTTTATGCCATTGAACTGGGGAAACA-TCAGGAGGGGCTCAGTGATGGAGTCGGGGCTCAGTGATGGAGTCGGGGCTGTGGACAGGGAGGAGGCCCTAGGGACTTGGGAGCACTGCGGTTCCCTA-----GGAGGAGGAG------------------------------------------------------GGGGGAAGAAGGGCAGGTTTCCATGGGCGCCATGCAGGAGGGCAG-------------------------------------------------CTCCCTCTCACCTCCAGTAACTGATCCCCGTACTCCAGGCCAGCCTGGTGAGCGATGCTCCCCACGGTCACCTTGGAGACATAGATGCCACCCTTCTCTCCACTCACGATGGAGATGCCCAGTGGCTCTGAGCCCTTCTGCACCTTCACGTGGCGTGGCTCCTCCACATAAGGCCTAAGGA-AAAG--TCAAAAGTTTCGGGGACTCAGGGTCAA-ACAACAGGGTTGGGGAGAGCCTGAGTT-----CTCCAATCAGG------------CAGTGC-AGAAAGGGCCCCAAGC--CTGGATGCTCCCATTG-TGACACAGCTACATGGGGACACGGTGG-GCCTACCCCTGTGTGACAAAGGACCACATTCCCACAGCCTCACGCAACACGAGC-CAGCACACCCAGA----CACGCAACCACCCAG-GCCAAAGACACAGAGAACGATCTGTGTGAACTATCA-----------------------ACACTGATACACG-----------CAGATTTTCATTATGGGAGAGAAGCTGCC---CCACAATATGCAAT-TACAAACTCC-------GG-GGGG-CTCGAGATGCCCTCCGAGGAAAAGAGATGGCTCTTGGGATGACATTCCATCCTGA-GGGGGCAACAGAAAATAATCCATTTTTATGTTTACTGGCTACACAGAGTGATGCAAACTGGTCATGGAAATTAAGCCGCTGCAGACCCAAGCCTTT-GTAAAGGGAGGAGGCA-GCTAGGAGCAAGGTTGCAGTCATGCACTTGCT-GCCCTGGG-----GCTGTCCAGTGTACCCAAGGGCACTG-GGGCAGGGGCTCGGTG-GGGAGCCTCTGGGCAAGCCAACCGCATG---------GTGGAAGGCCTGGGCCTGGTGGCCACGGGCAGCCTCAGAAGAGATCTGTGGTGGCAGAGACATCTGGAAGGTGACAAAGGTTAGAA-AG-----AAGGGACGCTTAGAGGAGAAAGACA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75385757 2433 - 133195287 --------TTTGACTGTGCTGCACACTGTGCCCAG-CACTGGTCTGCCACC---------------TCGTTGAGGGAAGCACTGCTGTGGGTGGCCAGAGCCC-AGGGCCTGGCGGGGTGACGACTGTGGGAATGTGTCCAAAGACAGACTCagaaagcgagtgaatgagaaaaggagaagagaaagagaagatgcagggg-aaagaacaagtcaattagaaaacaggagaaaaagagaaaggaaa------------agagaGCAGGGAG------GGAAAAAAGGAATGCTGTGC-TCCCAGCCCAATTCCTGAAGACCTGGTGTGTGGCCTGCAGCATA--TGAGGCCAGC----TGCCCAGTGCCCACGCCACTTGGAGAATGTGCT-CAGCCCCACCCAGCCGAAGTGGACACAGGGAAGGCTCACAGCACACATCTGCTGACCTGGAGC------TGCTCTGCTTGGCTGGGGGGGTGCTAGGCCCCTCGTCCTGCTCCATCAGTGGGTCAACGACAGAGGGATGCTCCGGGGTGGTGGTGCCGCTGCCCTGGAGAGTGGAGT---GGGTACCGGCAGGGTCCAGGTGTGAGCTGGAGACGGAGGACAGGAGGGATAAGGAG-------CAGTATAAAGATACCCAGAGCCACCCCTGCTCCTGTGGCAACTAGGTCTGAGCTATAAATGGGGACCGGGTCACACAGCCCTGCACCCTGTGCCCTGAGCAGAACAGACACATTAGAAGCCTGGACCCATGACATCCACCCCAAAGCATGCACCTGTCCTCTCC-CCTCCACCTGTCCTCAGCTCAGGGGCCCCCTCCAA----AGGCGTCTGGCCTCGGGGAGCTGTGCGCGTCCTGTCCCTTTTCCTCTGCCTGTGCATCCCATCTCTCC-TGCTGAGCT-TGTGACGCAGCACTGCCGGGCGTGCCTCCCCTTCTTT--TC---TGCCCTTCCACCCACAACTCAGGGGCAGATACAGACAG-GTGTACAGCATCTGCTCCTGGACAGGGAGCCAAACACTTTGAGTGAGAAT-CCACCCCCTGGGCCACAGCTCCTGGCTACCA-CAG--GCCGCTGCTGTTCAGGGGGACCACAGCCAT--CTGTT-TTCACACCCCA---TTTCAGGAG---------AAGACAGCCTCTCTCTATATGCCCCTTTTCCAAAATCCAGGGCTGGTCAATTCTCTCTTTAGCAGCAGTAGGATCCTCAGAACTTGCAGCTGTCACCCTGAGTCCCCCTGCAATGAGTGGAGTGCT-----GCCACACCCACCTCTCCACCCCCAGCCCAGACGG-----CCC----GGGGAGGCCC--GCGCTCACCTGGACCGAGAGTGGCTGCTGAGCTGGTGCACGTGGGGGTTGTACTGGGCCAGGATGGTGATGGTATCACACTGCTGCCCGATGATGAGCCGCGCCTGCTGCTCCGTGGCGCTCCGCAGGTTTATGCCATTGAACTGGGGAAACA-TCAGGAGGGGCTCAGTGATGGAGTCGGGGCTCAGTGATGGAGTCGGGGCTGTGGACAGGGAGGAGGCCCTAGGGACTTGGGAGCACTGCGGTTCCCTA-----GGAGGAGGAG------------------------------------------------------GGGGGAAGAAGGGCAGGTTTCCATGGGCACCATGCAGGAGGGCAG-------------------------------------------------CTCCCTCTCACCTCCAGTAACTGATCCCCGTACTCCAGGCCAGCCTGGTGAGCGATGCTCCCCACGGTCACCTTGGAGACATAGATGCCACCCTTCTCTCCACTCACGATGGAGATGCCCAGTGGCTCTGAGCCCTTCTGCACCTTCACGTGGCGTGGCTCCTCCACATAAGGCCTAAGGA-AAAG--TCAAAAGTTTCGGGGACTCAGGGTCAA-ACAAAAGGGTTGGGGAGAGCCTGAGTT-----CTCCAATCAGG------------CAGTGC-AGAAAGGGCCCCAAGC--CTGGATGCTCCCATTG-TGACACAGCTACATGGCGACACGGTGG-GCCTACCCCTGTGTGACAAAGGACCACATTCCCACAGCCTCACGCAACACAAGC-CAGCACACCCAGA----CACGCAACCACCCAG-GCCAAAGACACAGAGAACGATCTGTGTGAACTATCA-----------------------ACACTGATACACG-----------CAGATTTTCATTATGGGAGAGAAGCTGCC---CCACAATATGCAAT-TACAAACTCC-------GG-GGGG-CTCGAGATGCCCTCCGAGGAAAAGAGATGGCTCTTGGGATGACATTCCATCCTGA-GGGGGCAACAGAAAATAATCCATTTTTATGTTTACTGGCTACACAGAGTGATGCAAACTGGTCATGGAAATTAAGCCGCTGCAGACCCAAGCCTTT-GTAAAGGGAGGAGGCA-GCTAGGAGCAAGGTTGCAGTCATGCACTTGCT-GCCCTGGG-----GCTGTCCAGTGTACCCAAGGGCACTG-GGGCAGGGGCTCGGTG-GGGAGCCTCTGGGCAAGCCAACCGCATG---------GTGGAAGGCCTGGGCCTGGTGGCCACGGGCAGCCTCAGAAGAGATCTGTGGTGGCAGAGACATCTGGAAGGTGACAAAGGTTAGAA-AG-----AAGGGACGCTCAGAGGAGAAAGACA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73250508 2414 - 125196307 --------TTTGACTGTGCTGCACACTATGCCCGG-CACTGGTCTGCCACC---------------TCGTTGAGGGAAGCACTGCTGTGGGTGGccagagccc-agggcctggcGGGGTGATGACTGTGGGAATGTGTCCAAAGACAGACTCAGAAAGCGAGTGaatgagaaaaggagaagagaaagagaagatgcagggg-aaagaacaagtcaattagaaaacaggagaaaaagagaaaggaaa------------agagagcagggag------ggaaaaaaggaatgcTGTGC-TCCCAGCCCAATTCCTGAAGACCTGGTGTGTGGCCTGCAGCATA--TGAGGCCAGC----TGCCCAGTGCCCACGCCACTTGGAGAATGTGCT-CAGCCCCACCCAGCCGAAGTGGACACAGGGAAGGCTCACAGCACATATCTGCTGACCTGGAGC------TGCTCTGCTTGGCTgggggggTGCTAGGCCCCTCGTCCTGCTCCATCAGTGGGTCAATGAGAGAGGGATGCTCCGGGGTGGTGGTGCCGCTGCCCTGGAGAGTGGAGT---GGGTACCGGCAGGGTCCAGGTGTGAGCTGGAGACGGAGGACAGGAGGGATAAGGAG-------CAGTATAAAGATACCCAGAGCCACCCCCGCTCCTGTGGCAACTAGGTCTGAGCTATAAATGGGGACCGGGTCACACAGCCCTGCACCCTGTGCCCTGAGCAGAACAGACACATTAGAAGCCTGGACCCATGACATCCACCCCAAAGCATCCACCTGTCCTCTCC-CCTCCACCTGTCCTCAGCTCAGGGGCCCCCTCCAA----AGGCATCTGGCCTCGGGGAGCTGTGCGCGTCCTGTCCCTTTTCCTCTGCCTGTGCATCCCATCTCTCC-TGCTGAGCT-TGTGACGCAGCACTGCCGGGCATGCCTCCCCTTCTTT--TC---TGCCCTTCCACCCACAACTCAGGGGCAGATACAGACAG-GTGTACAGCGTCTGCTCCTGGACAGGGAGCCAAACACTTTGAGTGAGAAT-CCACCCCCAGGGCCACAGCTCCTGGCTACCA-CAG--GCCGCTGCTGTTCAGGGGGACCACAGCCAT--CTGTT-TTCACACCCCA---TTTCAGGAG---------AAGACAGCCTCTCTCTATATGCCCCTTTTCCAAAATCCAGGGCTGGTCAATTCTCTCTTTAGCAGCAGTAGGATCCTCAGAACTTGCAGCTGTCACCCTGAGTCTCCCTGCAATGAGTGGAGTGCT-----GCCACACCCACctctccacccccagcccagaCGG-----CCC----GGGGAGGCCC--ACGCTCACCTGGACCGAGAGTGACTGCTGAGCTGGTGCACGTGGGGGTTGTACTGGGCCAGGATGGTGATGGTATCACACTGCTGCCCGATGATGAGCCGTGCCTGCTGCTCCGTGGCGCTCCGCAGGTTTATGCCATTGAACTGGGGAAACA-TCAGGA-------------------GGGGCTCAGTGATGGAGTCGGGGCTGTGGACAGGGAGGAGGCCCTAGGGACTTGGGAGCACTGCGGTTCccta-----ggaggaggag------------------------------------------------------gggggaagAAGGGCAGGTTTCCATGGGCGCCATGCAGGAGGGCAG-------------------------------------------------CTCCCTCTCACCTCCAGTAACTGATCCCCGTACTCCAGGCCAGCCTGGTGAGCGATGCTCCCCACGGTCACCTTGGAGACATAGATGCCACCCTTCTCTCCACTCACGATGGAGATGCCCAGTGGCTCTGAGCCCTTCTGCACCTTCACGTGGCGTGGCTCCTCCACATAAGGCCTAAGGA-AAAG--TCAAAAGTTTCGGGGACTCAGGGTCAA-ACAAAAGGGTTGGGGAGAGCCTGAGTT-----CTCCAATCAGG------------CAGTGC-AGAAAGGGTCCCAAGC--CTGGATGCTCCCATTG-TGACACAGCTACATGGGGACACGGTGG-GCCTACCCCTGTGTGACAAAGGACCACATTCCCACAGCCTCACGCAACACGAGC-CAGCACACCCAGA----CACGCAACCACCCAG-GCCAAAGACACAGAGAACGATCTGTGTGAACTATCA-----------------------ACACTGATACATG-----------CAGATTTTCATTATAGGAGAGAAGCTGCC---CCACAATATGCAAT-TACAAACTCC-------GG-GGGG-CTCGAGATGCCCTCCGAGGAAAAGAGATGGCTCTTGGGATGACATTCCATCCTGA-GGGGGCAACAGAAAATAATCCATTTTTATGTTTACTGGCTACACAGAGTGATGCAAACTGGTCATGGAAATTAAGCCGCTGCAGACCCAAGCCTTT-GTAAAGGGAGGAGGCA-GCTAGGAGCAAGGCTGCAGTCATGCACTTGCT-GCCCTGGG-----GCTGTCCAGTGTACCCTTGGGCACTG-GGGCAGGGGCTCGGTG-GGGAGCCTCTGGGCAAGCCAACCGCATG---------GTGGAAGGCCTGGGCCTGGTGGCCACGGGCAACCTCAGAAGAGATCTGTGGTGGCAGAGACATCTGGAAGGTGACAAAGGGTAGAA-AG-----AAGGGACGCTCAGAGGAGAAAGACA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72082520 2412 - 125710982 --------TTTGACTGTGCTGCACACTGTGCCCAG-CACTGGTCTGCCACC---------------TCGTTGAGGGAAGCACTGCTGTGGGTGGCCAGAGCCC-AGGGCCTGGCAGGGTGACGACTGTGGGAATGTGTCCAAAGACAGACTCagaaagcgagtgaatgagaaaaggagaagagaaagagaagatgcagggg-aaagaacaagtcaattagaaaacaggagaaaaagagaaaggaaa------------agaaagcagggag------ggaaaAAAGGAATGCTGTGC-TCCCAGCCCAATTCCTGAAGACCTGGTGTGTGGCCTGCAGCATA--TGAGGCCAGC----TGCCCAGTGCCCACGCCACTTGGAGAATGTGCT-CAGCCCCACCCAGCCGAAGTGGACAGAGGGAAGGCTCACAGCACACATCTGCTGACCTGGAGC------TGCTCTGCTTGGCTGGGGGGGTGCTAGGCCCCTCATCCTGCTCCATCAGTGGGTCAATGACAGAGGGATGCTCCGGGGTGGTGGTGCCGCTGCCCTGGAGAGTGGAGT---GGGTACCGGCAGGGTCCAGGTGTGAGCTGAAGATGGAGGACAGGAGGGATAAGGAG-------CAGTATAAAGATACCCAGAGCCACCCCCGCTCCTGTGGCAACTAGGTCTGAGCTATAAATGGGGACCGGGTCACACAGCACTGTACCCTGTGCCCTGAGCAGAACAGACACATTAGAAGCCTGGACCCATGACATCCACCCCAAAGGATCCACCTGTCCTCTCC-CCTCCACCTGTCCTCAGCTCAGGGGCCCCCTCCAA----AGGCATCTGGCCTCGGGGAGCTGTGCGCGTCCTGTCCCTTTTCCTCTGCCTGTGCATCCCGTCTCTCC-TGCTGAGCT-TGTGGCGCAGCACTGCCGGGCATGCCTCCCTTTCTTT--TC---TGCCCTTCCACCCACAACTCAGGGGCAGATACAGACAG-GTGTACAGCGTCTGCTCCTGGACAGGGAGCCAAACACTTTGAGTGAGAAT-CCACCCCCAGGGCCACGGCTCCTGGCTACCA-CAG--GCCGCTGCTGTTCAGGGGGACCACAGCCAT--CTGTT-TTCACACCCCG---TTTCAGGAG---------AAGACAGCCTCTCTCTATATGCCCCTTTTCCAAAATCCAGGGCTGGTCAACTCTCTCTTTAGCAGCAGTAGGATCCTCAGAACTTGCGGCTGTCACCCTGAGTCTCCCTGCAATGAGCGGAGTGCT-----GCCGCACCCACCTCTCCACCCCCAGCCCAGACGG-----CCC----GGGGAGGCCC--ACGCTCACCTGGACCGAGAGTGGCTGCTGAGCTGGTGCACGTGGGGGTTGTACTGGGCCAGGATGGTGATGGTATCACACTGCTGCCCGATGATGAGCCGCGCCTGCTGCTCCGTGGCGCTCCGCAGGTTTATGCCATTGAACTGGGGAAACA-TCAGGA-------------------GGGGCTCAGTGATGGGGTCGGGGCTGTGGACAGGGAGGAGGCCCTAGGGACTTGGGAGCACTGCGGTTCCCTA-----GGAGGAGGCG------------------------------------------------------GGGGGAAGAAGGGCAGGTTTCCATGGGCGCCATGCAGGAGGGCAG-------------------------------------------------CTCCCTCTCACCTCCAGTAACTGATCCCCGTACTCCAGGCCAGCCTGGTGAGCGATGCTCCCCACGGTCACCTTGGAGACATAGATGCCACCCTTCTCTCCACTCACGATGGAGATGCCCAGTGGCTCTGAGCCCTTCTGCACCTTCACGTGGCGTGGCTCCTCCACATAAGGCCTAAGGA-AAAG--TCAAAAGTTTCGGGGACTCAGGGTCAA-ACAAAAGGGTTGGGGAGAGCCTGAGTT-----CTCCAATCAGG------------CAGTGC-AGAAAGGGCCCCAAGC--CTGGATGCTCCCATTG-TGACACAGCAACATGGGGACACGGTGG-GCCCACCC--GTGTGACAAAGGACCACATTCCCACAGCCTCACGCAACACGAGC-CAGCACACCCAGA----CACACAACCACCCAG-GCCAAAGACACAGAGAACGATCCGTGTGAACTATCA-----------------------ACACTGATACACG-----------CAGATTTTCATTATAGGAGAGAAGCTGCC---CCACAATATGCAAT-TACAAACTCC-------GG-GGGG-CTCGAGATGCCCTCCGAGGAAAAGAGATGGCTCCTGGGATGACATTCCATCCTGA-GGGGGCAACAGAAAATAATCCATTTTTATGTTTACTGGCTACACAGAGTGATGCAAACTGGTCATGGAAATTAAGCCGCTGCAGACCCAAGCCTTT-GTAAAGGGAGGAGGCA-GCTAGGAGCAAGGTTGCAGTCATGCACTTGCT-GCCCTGGG-----GCTGTCCAGTGTACCCAAGGGCACTG-GGGCAGGGGCTCGGTG-GGGAGCCTCTGGGCAAGCCAACCGCATG---------GTGGAAGGCCTGGGCCTGGTGGCCACGGGCAGCCTCAGAAGAGATCTGTGGTGGCAGAGACATCTGGAAGGTGACAAAGGTTAGAA-AG-----AAGGGACGCTCAGAGGAGAAAGACA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75539441 2403 - 121768101 CCTGGCA-CCCACTTATGCTGCAC---ATGCCCGG-CACTGGTCCGCCACC---------------TCCTTGGAGGAAGCACTGCTGTGGGTGGCCAGAGCCC-AGGGCCTGGCTGGATGATGACTGTGGGAATGTGTCCAAAGACAGACTCAGAAAGCGAGTGAATAAGAAACAGAGGAGAGAAAGAGAAGATGCAGGGG-AAAGAACATGTCAACTAGAAAACACGAGAAAAAGAGAAAG----------------AAAGAGGAGGGCA------GGAAAAAAGGAATGCTATGC-TCCCAGCCCAACTCCTGAAGACCTGGCGTGTGGCCTGCAGCACA--TGAGGCTGGT----TGCCCAGTGCCTGCGCCACCTGGAGGATGTGCT-CAGCCCCACCCGGCCCATGTGGACACAGAGAAGGCTCACAGCACACATCTTCTGACCTGGAGCTGGGGGTGCTCTGCTTGGCTAGGGGGGTGCCAGGGCCCTCGTCCTGCTCCATCAGTGGGTCAATGACAGAGGGATGCTCCGGGGTAGTGGTGCCGCTGCCCTGGAGAGTGGAGT---GGGTACCAGCAGGGTCCAGGTGTGAGCTGGAGACGGAGGACAGGAGGGATAAGGAG-------CAGCACAAAGCCATCCAGAGCCACCCCCTTTCCTGTGGCAACGGGGTTTGAGATGTAAATGGGGACTGGGTCACACAGCCCTGC-------GTCCTAAGCAGAGCAGACACATTAGGAACCTGGACCCATGACATCCACCCCAAAGGATCTGCCTGTCCTCTCC-TCCCC----------------------CTCTCCAA----AGGCATCTGGCCTCGGGAA-CCGTGAGCATCCTGTCCCTCTTCCTCTGCCTGTGCATCCTATCTGTTC-CACTGAGCC-TGTGGTGCAGCACTGGAGGGCGTGC--CCCCTTCTTT--TC---TGCCCTTTGACCCACGGCTCAGGGGCAGATACAAGCAG-GTGTCCACCGTCTGCTCATGGTCAGGGAGCCAAACACTCTCAGCCAGAAT-TCACCCATGGGGCCGCAGATCCTGGCTGCCACCAG--GCCCCTGCTGGGCAGGGGGACCAC-GCCAT--CTGTT-TCCACACCCCA---TTTCAGGAG---------GCGACAGCCTCTCTCTGTATGCGCCTTTTCCAAACTCCAGGGCTGGTCACCTCTCCCTTTAGAAGCAGTAGGATCCCCAGAACTTGCAACTGGCTCCCTGGGTCTCCCAGCAATGAGTGGAGTGCT-----GCCACACTCACCTCTCTGCCCCCAGCCCAGACGC-----CCC----AGGGAGGCCT--GCACTCACCTAGACTGGGAGTGGCTGCTGAGTTGGTGCACGTGGGGGTTGTACTGGGCCAGGATGGTGATGGTGTCACACTGCTGCCCAATGATGAGCCGCGCCTGCTGCTCTGTGGCGCTCCGCAGG-TTATGCCATTGAACTGGGGAAACA-CCAGGG-------------------TGGGCTCAGTGACAGGGTTGGGGCTGTGGACAGGGAGAAGGCCCTGAGGACTTGGGACTAGTATTGCTCCCTA-----GGAGGAGGAGA-----------------------------------------------------GGGGGAAGAAGGGCAGGTTTCCATGGAACCCAAGCAGGAAGGCAG-------------------------------------------------CTCCCTCTCACCTCCAGTAACTGATCCCCGTACTCGAGGCCGGCCTGGTGAGCGATGCTCCCCATGGTCACCTTGGAGACATAGATGCCGCCCTTCTCTCCACTCACAATGGAGATGCCCAGCGGCTCTGAGCCCTTCTGCACCTTCACGTGGCGTGGCTCCTCCACGTAAGGCCTGGGGA-AGAG--TCCAAAGTTTCGGGGACTCAGAGCCAA-ATGAAAGGGTTGGGGAGAGCCTGAGCTTCGGCTTGCGATCAGG------------CAGTGC-AGAAAGGGCCCCAAGC--CTGGATGCTCCCATCG-TGACACAGCTAGATGGGGCCAAAGTGG-GCCCACCCCTGTGCGACAAAGGATCACACTCCCACAGCCTCACACAACGTGAGCACAGCACACCCAGA----TACGAAAGCACCCAG-GCTAAAGACACAGAGAATGGTCCCTGTGAACTATAA-----------------------ACACTGATACATG-------------GATTTTCATCACAGGAGAGGAGCTGCC---CCAAAATATGAAAT-TGCAAACTCTTGGCGGGGG-AGGGTCTCAAGATGGCCTCCGAGGAAAAGAAATGGCTCCTGGGATGACATTCCATCCTGA-GGAGGCAACAG-AAATAATCCACTTTTGTGTTTACTGGCTACACAGAGTGATGTTAGCTGGTCATGGAAATTAAGCCACTGCAGACCCAAGCTGTT-GTAAAGGGAGGAGAAG-GCTC-CAGCAAGGCCACGGCCATGCACTTGCT-GCCCT-GG-----GCTGCCCACTGCACCCAAGGGCACCGCAGGCAGGGGCACGGTG-GGGAGCCTCTGGGCAGGCCGACCGCATG---------GAGGAAGACTTGGGCCTGGCAGCCACGCACAGCCTCAGAAGAGCTCCATGGTGTCAGAGACATCTGGAAGGTGACAAAGGTTAGAA-AGAAGTTAAGGGACACTCAGATGACAATGACA i calJac3.chr12 C 0 C 0 s mm10.chr14 24149126 2237 + 124902244 --------------CTCACCACCC---TCACCAGG-GCCTGGCCCTACATC--------------------------AACAGTGCCCCTGCTGGCCAGAGCCCTAGGGCATTCCTGAATGATAAAGGTGGGA---TGTCTGGAAACAgaat----------------------ggaagaag---------------------gaaagacagaccga------agcgggagagaaggggaaggagga------------agggaggaggg------------gaaagga---------------------------caggCCTGGTGTG-------------------------------GCTCTGT-CTTACTGGAGCTGGAGG----------------------CCAAACGGACA-----------CTCAGCGTGCCTATGCTGACCTGGTGCTGGAGGCGCTTTGCTTGGCTGGGGGGGTGCCAGGACCTTCATCCTGTTCCATCAGTGGGTCGATGACAGAGGGATGTTCTGGGGTCCCAGCACTGCTGCCCTGGAGAGTAGAGTGAGGGGTAGCAGCTGGGTCCAGATGAGAGCTGGGGGTGAAAAACAGG------AATGTG-------CTATACACACGCAGCCAGAGCCACCCTTCCTGCACTAGCAAC-AGGCCTAGACTGTGACTAGGGA-------ATCCGGCTTCACGCACTGAGTCCTGGAAAGA-CAGACACA----GAGTCTGAATT--TTAC-----------------CACCGGGCCCCACAGGCTCTGCCTGACTCCAA-TGAGGGACCCTCTCCAA----AGGGATCCAGTCTGGAGGACACGCAAAGCCACTTTCCCTTCTTGTCTGCTTTTATTCTCTGCCAATCCATGC----AT-GGTGGCTCTGCATT--AGGACATGCCGCCCCTCCTGTCACC---TACCCTGGGACCCACAGTTTAGGGGCAGGTACAGGCAG-GTGTCCAGTGTTTCTTCAC--ACATAGAGTCAACCAC--TGAGTATGGAT-GCTGAACCAGGAGTTCAGCTTTTGGTTACCA-CAGCTACCCCTCC------------CCCCAGACCT--CAGCTGTTGATACTCTAATGTTTCAGGA----------------CCCTGTCTCTAGATACCTCCTGATCCAAATTCAAGGTGAATCATCTTCCCTT-----ACTAGAAGAATCTCAAAAACTTGGAACTGGCATC------------------AGGTAAGTACTCACCCATTGTACCCATCTCTCCACCCCCAGCCTGGACCACAGCCCCC----TGGGAAG--------CTGACCTGGAGCGGGAGTGGCTGTTGAGCTGGTGGATGTGTGGGTTGTACTGGGCCAGGATGGTGATGGTGTCACACTGCTGTCCGATGATGAGCCGGGCCTGCTGCTCGGTGGCACTTCTCAGGTTTATGCCATTGAACTAGGATGATGCCCAGGG-------------------TAGAATCAATGA-----CTGAGGCAGTAAACATGGATG--------------TGGGAACATTGC--TTTGTag-----ggagaaagagagggagagagggagggagggagggagggagggagggagggagggagggagggagggagggagaaaggaaggaaagaagggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggGGCACACCCTCTTACCTCAAGTAACTGGTCCCCATACTCAAGTCCAGCTTGATGAGCGATGCTCCCCAGGGTCACCTTGGAGACATAGACACCACCCTTTTCTCCACTCACGATGGAGATACCCAGAGGCTCTGAACCCTTCTGCACCTTCACGTGGCGTGGCTCTTCCACAAAAGGCCTGGCAA-AAAGAACCAAAGGCTTCAGTGACTCAGAGCTAACGCAGTAGAGC---GGGGAGGCCGAGATGCAGCATGCAGTCCG-------------CAGTGTGAAGGATGGCTTGGAGC--TCAGGTGTTCTGATAA-TGATAGA-------------------------------AAATGGCAAAGCA--GCTTTCCTGAAACTGCATGCAATACAAACACAGCACATCAAAA----CAAACA-------------GAAAAGACAGAGAATGGTTCATGTGAACTATAAACcacacacacacacacacacacacacagatacaca-----------cacaTTTTTAGTTGATGAAAAGATCCG-G---TCAGGATATACACTGTGCATATCCC--ATGGAGG-AGGTTCTGAAGACACCCACTGGGGAAACATGATGGCTC-TGCAGTTACAATCTCTCCCCC-CAAAATGATAG-GAAGAGTCAGCTCTTATATTTA-TGGGTCCCTAGGATGA----------------AAATGAAGCCACT------TTAAGCCATGAGAAGAGGGCTAAGGGA-CACTGGAGCAAGGATGCGTCCATGCATTTACTAGCCGGGGA-----GCCACCTCCCATATCCAAGGGCATGA-AGG---------GGTGTGAGAACCTCATGTCAGGCCAACCTCAGACTCCTCAGCGAGGAGGACCTGGGTCTAATGGCCACGGGCAGCCTCAGAAGGATTCTGTGGTGGAAGAGACACACTGA--TTGGTAAAGGTTAGGACAG-----AAGGGGTGCTCTGGGCGGGACCACA i mm10.chr14 I 19 I 460 s canFam3.chr4 27703871 2435 + 88276631 -------CCCAGCACGTGCTGCAC---ACGCCTGGACACTTGCCTGTCACCCTCTAAACCTGGAGCTCCCTGGGGGCG--ACTGCTGATGGTGGCCACAGCCC-AGGGCCTGGCTGGGTGGTGACTGTGGAATTCTGTCTaaagacagagtgagaaaacgagtaactgagaaaaagaggagaaaaggag-agaggcagagc-taagaacaagtcaatgagaaaaaaaaagagagagagagaaaaaacaagaaagtgagaaagggcaggagggtgagaggaaaaaagGAATGGCATGCTTCCCACCCCAAATCCTG-ACACCTGCTATATGGCCTGCAGCCCAGGTGACGGCAGCAGGATGAGTTGGGGCCACAGCCATGGCCGCCCACCCTCCCACCCCCCTGGGCCAGGGCGCACAGATGGGAGGCTCACGGCACGGATTTGCTGACCTGGAACTGGGGGTGCTCTGCTTGGCCTGGGGGGTGCCAGGGCCCTCATCCTGCTCCATCAGCGGGTCAATGACAGAGGGATGCTCCGGGGTGGGGGCACTGCTGCCCTGGAGAGCGGCGT---GAGTACTGGCAGGGTCCAGGTGGGAGCTGGGAATGGAGGTCAGGAGGAATAAGGAGTGGCTCACAGTCCTCGGCTGTCCATGGCCACCCC--CTCGGGTGGTGACCAGGGCTGGGCTCTGAACAGGGACTGGGTCACATGGCTCCGA-------GCCCCGAGAAGAGCAGACGTCTTGGGAGCTTGGACTCAGGTCGCTGACCCTGCAGGATCGGCCTGTCCTCTCC-CCCTCACCTGTCCTCAACTTGGGGATCCTCTCTGAATTCAGGTGTC-GGCCTGGAGGC-CCACACACTCACTGTCCCTCTTCCTCTG-TTGTACATCTTGTCCTTTC--GCTGAGCTGTGCAGCGCTGCATGGCGGGGCATGTCTCCCCCTTCTC--TCACATGCCTGGCAACCCACAGCTCAGGGGCAGATACAGACAGCGTGTGAGG-------------------------ACACTCTGCGTGAGAATCCCACCCTCAGGGCCTCAGTTCCTGGCT-CCA-CAC--ACCT------GTCGGGGGGCTTCTTGCTCTGCATGCT-TCCACACCCCA-CACCTCAGGTATCCTACTTCGCATCTTCCTCCTCCTATATGTGTTTTTTCCAAAATGCAGGGCTGGCCACCTCTCCACTTAG-GGCAGCTGAATGGCCAGAACTCACAGCTGGCACCCTG-------------------------------GCTGCAC-CATCTGTCCTCCCCCGGCCCAGATGG-----CCCCCCTGGGGAGGCCCAGGCCCTCACCTGGACCGAGAGTGGCTGCTGAGCTGGTGCATGTGTGGATTGTACTGGGCCAGGATGGTGATAGTGTCACACTGCTGCCCGATGATGAGCCGGGCCTGCTGCTCCGTGGCACTCCGCAGGTTTATGCCGTTGAACTAGGAAACAT-CCAGAG-------------------CACACTCAGTGATGTCACGGGAGCTGGGGACGGG-------------------GGGAGCACAGC-ATTCCCGAAGAAGGGAGGAGCAG------------------------------------------------------GGGAGAGGTAGGAGAG------AAGGATGCAGTGCGGAGGGGCAG-------------------------------------------------TTCTCGCCTACCTCAAGTAATTGATCCCCGTACTCAAGGCCAGCTTGGTGAGCGATGCTCCCCCCTGTCACCTTGGAGACGTAGACCCCGCCTTTCTCTCCACTCACAATGGAGATGCCCAGTGGCTCCGAGCCCTTCTGCAGCTTGACATGGCGTGGCTCCTCCACATAGGGCCTTGGAAGAGAG--CCAACAGTGT-GGGGACTCGGACACAA-TGGAAAGGTTTGGGGCAAATCGGAGGTCAGACATGCAACCAG-------------CTATGC-AGAAAGGGGCGGGGACCGCCAGATGCTCCTCTAA-TGACACAGCTGGATGGGAATGTGATGACCCCCACCTCTGTATGGCAGTGATACATATTCCCAGAACCTCATGCAATACAAACACAACACCCCCCAATGACCACAGAAGCACCCAGCCCCAAAGACACAAAGAATGGTCCTTATAAACTATAA-----------------------ACACTGACAGGCAGGGAGAAAGCACAAAGTTTCATAATACGAGAGGAGTTGCCACAACAAAATGTGCTATCCACAAACCCT-------GGTGGGGTTTCAGGATGCCCTAGGAGGAAAAGAAGTGGTTCCTGGGATGATAGTC-ACCCAGA-AGAAATGATATACAGTA-TCAGTTTTTATATTTACCAG---TAGAGAGTGATGTACAATGACCATGGAAATTAAGCCACTGCAAACCCAAGCCATT-AAAAAGGGAGCGGGGAGGCTGGGAGCAAGGCGAGGACCATGCACTTGCT-GGCCTGGGGGGAAGCTGTCCACCGTGCC--AGGGCACAA-GGGCA----CTCGGGC-AGGGGCCTCATGTCAGGCCAACCTCAGACTCCTCAGGGAGGAGAACCTGGGCCTGGTGGCCACAGGCAGTCTCAGGAGGGATCTGTGGTGGTGGAGACACCTGGAAGGTGCAAAAAGTTAGAA-AGAAAA-GAGGGATGCTCAGAAAAGGAGGAC- i canFam3.chr4 C 0 C 0 a score=388914.000000 s hg38.chr10_KI270825v1_alt 51806 140 + 188315 ATCAGAGACACCTGGAACATAAC-----------------------AGA---AAAGACAGTCAAGTGATGCGGAGCC-TCCCGTTGGGACTTCACGCCACTCAGGGCTTCATTCCTCCAAGGTATGGACACCTGAGATTTTCCTCGCAGGATAAAACCATATAGCCA s panTro4.chr10 76422527 140 + 133524379 ATCAGAGACACCTGGAACATAAC-----------------------AGA---AAAGACAGTCAAGTGATGCGGAGCC-TCCCGTTGGGACTTCACGCCACCCAGGGCTTCATTCCTCCAAGGTATGGACACCTGAGATTTTCCTCGCAGGATAAAACCATATAGCCA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76090562 140 - 133410057 ATCAGAGACACCTGGAACATAAC-----------------------AGA---AAAGAGAGTCGAGTGATGCGGAGCC-TCCCATTGGGACTTCACGCCACCCAGGGCTTCATTCCTCCAAGGTATGGACACCTGAGATTTTCCTCGCAGGATAAAACCATATAGCCA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35033624 140 + 104879549 ATCAGAGACACCCGGAACATAAC-----------------------AGA---AAAGACAGTCGAGTGATGCGGAGCC-TCCCATTGGGACTTCACGCCACCCCGGGCTTCGTTCCTCCAAGGTATGGACACCTGAGATTTTCCTCACAGGATAAAACCATATAACCA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73826903 140 - 130959383 ATCAGAGACACCTGGAACATAAC-----------------------GGA---AAAGACAGTCGAGTGATGCGGAGCC-TCCCGTCGGGACTTCATGCCGCCCAGGGCCTCATTCCTCCACGGTGTGGACACCTGAGCTTTTCCTCACAGGATAAAACCATATAGCCA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75388190 140 - 133195287 ATCAGAGACACCTGGAACATAAC-----------------------GGA---AAAGACAGTCGAGTGATGCGGAGCC-TCCCGTCGGGACTTCACGCCGCCCAGGGCCTCATTCCTCCAGGGTGTGGACACCTGAGCTTTTCCTCACAGGATAAAACCATATAGCCA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73252922 140 - 125196307 ATCAGAGACACCTGGAACATAAC-----------------------GGA---AAAGACAGTCGAGTGATGCGGAGCC-TCCCGTCGGGACTTCACGCCGCCCAGGGCCTCATTCCTCCAGGGTGTGGACACCTGAGCTTTTCCTCACAGGATAAAACCATATAGCCA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72084932 140 - 125710982 ATCAGAGACACCTGGAACATAAC-----------------------GGA---AAAGACAGTCGAGTGATGCGGAGCC-TCCCGTCAGGACTTCATGCCGCCCAGGGCCTCATTCCTCCAGGGTGTGGACACCTGAGATTTTCCTCACAGGATAAAACCATATAGCCA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75541844 118 - 121768101 ACCGGAGACACCTGGAACAGAAACAACCAAAGACACCTTGTCGCTGGGA---AAAGACAGCTGAGTGACAACGAGCC-------CGGGACTTCATGCCGGCCCTGG-------------------------------------TCGCAGGATAAAACC--ACAGCCA i calJac3.chr12 C 0 I 243 s canFam3.chr4 27706306 112 + 88276631 -----AGACGCCTAGAACCTAAC-----------------------AGACAGAAAGGCACGCAGGTGATGCTGAGCCGCCCCGTGAGGACT--GTGCTGCACACTGC-----------------------CCTAAGCTCTTCCTCTCGGGACAAAAT--TACAGCCA i canFam3.chr4 C 0 C 0 e mm10.chr14 24151363 460 + 124902244 I a score=539107.000000 s hg38.chr10_KI270825v1_alt 51946 168 + 188315 AAGGCTGAGGGGG-----------------CCAGTCCAGGTC--CCCTCTACAGCACAT-GGTCAGGATAGATTC----------TAGCGGGGAGGCACCTAAACCACC----------CCACCCCG-GCCACCTGGAGGCAGAGCAGCTTCCCACTTGGCAGTCTCAGCCTGTGGC------CCTATGCCCCAGCCCTCTTGGGAAGGGGAAAT s panTro4.chr10 76422667 168 + 133524379 AAGGCTGAGGGGG-----------------CCAGTCCAGGTC--CCCTCTACAGCACAT-GGTCAGGATAGATTC----------TAGCGGGGAGGCACCTAAACCACC----------CCACCCCG-GCCACCTGGAGGCAGAGCAGCTTCCCACTTGGCAGTCTCAGCCTGTGGC------CCTATGGCCCAGCCCTCTTGGGAAGGGGAGAT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76090702 168 - 133410057 AAGGCTGAGGGGG-----------------CCAGTCCAGGTC--CCCTCTACAGCACAT-GGTCAGGATAGATTC----------TAGCAGGGAGGCACCTAAACCACC----------CCACCCCG-GCCACCTGGAGGCAGAGCAGCTTCCCACTTGGCAGTCTCAGCCTGTGGC------CCTATGACCCAGCCCTCTTGGGAAGGACAGAT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35033764 168 + 104879549 AAGGCTGAGGGGG-----------------CCAGTCCAGGTC--CCCTCTACAGCACAT-GGTCGGGATAGATTC----------TAGCGGGGAGGTACCTACACCACC----------CCACCCCG-GCCACCTGGAGGCAGAGCAGCTTCCCACTTGGCAGTCTCAGCCTGTGGC------CCTATGGCCCAGCCCTCTTGGGAAGGGGAGAC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73827043 168 - 130959383 AAGGCTGAGGGGG-----------------CCAGTCCAGGTC--CCCTCTACAGCACAT-GGTCGGGATAGATTC----------CAGCAGGGAGGCACCTAAACCACC----------CCACCCCA-GCCACCTGGAGGCAGAGCAGCTTCCCGATTGGCACTCTCAGCCTGCGGC------CCTGTGGCCCAGCCCTCTTGGGAAGAGGAGAT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75388330 168 - 133195287 AAGGCTGAGGGGG-----------------CCAGTCCAGGTC--CCCTCTACAGCACAT-GGTCGGGATAGATTC----------CAGCAGGGAGGCACCTAAACCACC----------CCACCCCA-GCCACCTAGAGGCAGAGCAGCTTCCCGATTGGCACTCTCAGCCTGCGGC------CCTGTGGCCCAGCCCTCTTGGGAAGAGGAGAT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73253062 168 - 125196307 AAGGCTGAGGGGG-----------------CCAGTCCAGGTC--CCCTCTACAGCACAT-GGTCGGGATAGATTC----------CAGCAGGGAGGCACCTAaaccacc----------ccacccca-gccacctGGAGGCAGAGCAGCTTCCCGATTGGCACTCTCAGCCTGCGGC------CCTGTGGCCCAGCCCTCTTGGGAAGAGGAGAT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72085072 165 - 125710982 AAGGCTGAGGGGG-----------------CCAGTCCAGGTC--CCCTCTACAGCACAT-GGTCGGGATAGATTC----------TAGCAGGGAGGCACCTAAACCACC----------CCACCCCA-GCCACCTGGAGGCAGAGCAGCTTCCCGATTGGCACTCTCAGCCTGCGGC------CCTATGGCCCAGCCCTCTTGGGAA---GAGAT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75542205 168 - 121768101 AAGGCTGAGGGGG-----------------CCAGTCTAGGTC--CCCTCTACAGCATAA-GATGGGGATAGGTTC----------TAGCGGGAAGGCACCTAAACCACC----------CCACCCTG-GCCACCTGGAGGCAGAAAAGCTTCCCACTTGGCAGTCTCAGCCTGCAGC------CCTGCAGGCCAACCCTCTTGGGAGGGAGAGAT i calJac3.chr12 I 243 C 0 s canFam3.chr4 27706418 213 + 88276631 AAGGCGGAGGGAGGAGCCAGCTGGAGCAACCCATCCTTGGGCTGCCCTCCCGAGCACAAGGGTAGGGACAAGCTCACATGGTGATGGGCCGGCAGGCTGCTGAGCTACCTCCTTGCCCGCCACCCCTCACTACCCAGAGGCACAGCAATCTCTCAAAC-TCAGCCTCAGCCTGGGACCCATTACCCAGGGCCCAGTCCTC-TGGCAGCCTGAGAT i canFam3.chr4 C 0 C 0 e mm10.chr14 24151363 460 + 124902244 I a score=864500.000000 s hg38.chr10_KI270825v1_alt 52114 262 + 188315 TAAAATTCTTCTTGAGTTGTCCCTGC-TCTCTCCCACCCTCCAAAGTGTTCCCACTTCCCAAACTTGCCCACTCTGGAAATCCTCCCTTGACCCTCCAGCT---CAGACAGATCCACCCCAGACTACACCCACGGTCCCTTCCAATTCAACACGGATTACAGCCCCGTGCTGTTGAGAGCTGC-AGAGCCCTCAGCACACAGCCACCCCTACATCACCCTCCTGCCCCAGCCTTAGATGATGAAACAG-AGGCCCAGA-GCAGAAAGAG--------------------------------------------------- s panTro4.chr10 76422835 262 + 133524379 TAAAATTCTTCTTGAGTTGTCCCTGC-TCTCTCCCACCCTCCAAAGTGTTCCCACTTCCCAAACTTGCCCACTCTGGAAATCCTCCCTTGACCCTCCAGCT---CAGACAGATCCACCCCAGACTACACCCACGGTCCCTTCCAATTCAACACGGATTATAGCCCCGTGCTGTTGAGAGCTGC-AGAGCCCTCAGCACACAGCCACCCCTACATCACCCTCCTGCCCCAGCCTTAGATGATGAAACAG-AGGCCCAGA-GCAGAAAGAG--------------------------------------------------- i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76090870 262 - 133410057 TAAAATTCTTCTTGAGTTGTCCCTGC-TTTCTCCCACCCTCCAAAGTGTTCCCACTTCCCAAACTTGCCCACTCTGGAAGTCCTCCCTTGACCCTCCAGCT---CAGACAGATCCACCTCAGCCTACACCCACGGTCCCTTCCGATTCAACACGGATTACAGCCCCATGCTGTTGAGAGCTGC-AGAGCCCTCAGCACACAGCCACCCCCACATCACCCTCCTGCCCCAGCCTTAGATGATGAAACAG-AGGCCCAGA-GCAGAAAGAG--------------------------------------------------- i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35033932 262 + 104879549 TAAAATTCTTCTTGAGTTGTCCTTGC-TCTCTCCCACCCTCCAAAGTGTCCCCACTTCCCAAACTTGCCCACTCTGGAAGTCCTCCCTTGACCCTCCAGCT---CAGACAGATCCACCCCAGCCTACACCCATGGTCCCTTCCGATTCAACACAGATTACAGCCCCGTGCTGTTGAGAGCTGC-AGAGCCCTCAGCACACAGCCACCCCCACATCACCCTCCTGCCCCAGCCTTAGATGATGAAACAG-AGGCCCAGA-GCAGAAAGAG--------------------------------------------------- i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73827211 262 - 130959383 TAAAATTATTCTTGAGTTGTCCCTGC-TTTATCCCACCCTCCAAAGTGTTCCCACTTCCCAAACTTGCCCACTCTAGAAGTCCTCCCTTGACCCTCCAGCT---CAGACAGATCCACCCCAGCCTACACCCACAGTCCCTTTCGATGCAACACGGATTAGAGCCCCGTGCTGTGGACCGCTGC-AGAGCCCTCAGCACACAGCCACCCCCAGATCACCCTCCTGCTCCAGCCTTAGATGATGAAACAG-AGACCCAGA-GCAGAAAGAG--------------------------------------------------- i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75388498 262 - 133195287 TAAAATTATTCTTGAGTTGTCCCTGC-TTTATCCCACCCTCCAAAGTGTTCCCACTTCCCAAACTTGCCCACTCTAGAAGTCCTCCCTTGACCCTCCAGCT---CAGACAGATCCACCCCAGCCTACACCCACAGTCCCTTTCGATGCAACACGGATTAGAGCCCCGTGCTGTGGACAGCTGC-AGAGCCCTCAGCACACAGCCACCCCCAGATCACCCTCCTGCTCCAGCCTTAGATGATGAAACAG-AGACCCAGA-GCAGAAAGAG--------------------------------------------------- i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73253230 262 - 125196307 TAAAATTATTCTGGAGTTGTCCCTGC-TCTCTCCCACCCTCCAAAGTGTTCCCACTTCCCAAACTTGCCCACTCTAGAAGTCCTCCCTTGACCCTCCAGCT---CAGACAGATCCACCCCAGCCTACACCCACAGTCCCTTTCGATGCAACACAGATTAGAGCCCCGTGCTGTGGACAGCTGC-AGAGCCCTCAGCACACAGCCACCCCCAGATcaccctcctgctccagccttaGATGATGAAACAG-AGACCCAGA-GCAGAAAGAG--------------------------------------------------- i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72085237 262 - 125710982 TAAAATTATTCTTGAGTTGTCCCTGC-TTTCTCCCACCCTCCAAAGTGTTCCCACTTCCCAAACTTGCCCACTCTAGAAGTCCTCCCTTGACCCTCCCGCT---CAGACAGATCCACCCCAGCCTACACCCACAGTCCCTTTCGATGCAACACAGATTAGAGCCCCGTGCTGTGGACAGCTGC-AGAGCCCTCAGCACACAGCCACCCCCAGATCACCCTCCTGCTCCAGCCTTAGATGATGAAACAG-AGACCCAGA-GCAGAAAGAG--------------------------------------------------- i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75542373 262 - 121768101 TAAAATTCTTCTTGAGTTGACCCTGC-TCTCTCCCACCCTCCAAAGTGTTCCCACTTCCCAAAGTTGCTCGCTCTGGAAGTTCTCCCTTAACCCTTCAGCT---CAGACAGTTACTCCCTAGCCTACACCCACAGTCCCTTCCAACTCAAGATGGATTTGAGCCTCAGGCTGTTGAGACCTGC-AGAGCCCTCAGCACACAGCCACCCCCACATCACCCTCCTGCACCAGCCTTAGATGATGGAACAG-AGACCCAGG-GCAGAAAGAG--------------------------------------------------- i calJac3.chr12 C 0 C 0 s mm10.chr14 24151823 224 + 124902244 TGAAATTCTTCTTACATTATAC---------TGACACCCTGCCAGGTAGTTTTCCTTCCCAAACCCGCC--CTCCACTGGTCTTTCCTCGACCTTCTGGCTCTGCAGTCAGTTCTGCCATTGCT--------------------------CATGTATTAGGGTGCCAGGTAGTTACA-------AGGACCCGAAACAGACAACCATCTAAAGACCATCCTCATAGCCCAGCCTAAAAAGATGGAGCAGTAGACTCACA-CCAAGAAGGG--------------------------------------------------- i mm10.chr14 I 460 I 1754 s canFam3.chr4 27706631 297 + 88276631 -GAAAATCCTTCTGACTTGTCCCTTCACTTCTCCCACCCTC-------TCTCTGCTTCCCAAACTCACTCATGCCGCAAGGCCCTCTCTGATCCTGTGGCT---CAGAC-GCTTATCCCTGGCCTGTA--------ACTTGCAGACCCATCACATACCACAGTGCCAGGCAGTTTGGAGTCGTAAGAACCCTTAACCAGCAGCAACCC--ACACTGTCCTCATACCCCCAGCCGGCATTAAAGGACAG-CATGGCAGATGCAGGCAGAGCTCATTTTGAGTCTGATGCTCCTCAGTTCTCACTGAAAACCCCTTCCTGTG i canFam3.chr4 C 0 C 0 a score=1072427.000000 s hg38.chr10_KI270825v1_alt 52376 375 + 188315 GTCCACCTCCGTACAACACGTG-TATCACAATAAAGGAGCAAGCAACTAAGTCACAGCAATAGCCACCCAATAGAACAATGATCTGAACCAGGTTCCCAGGTTCCAGTGACATGCAAAGACGTAAG----GGACACACCACGGGGTGGGGAGGCCCGATCGGCATCATTTCACTTATATTTATCTGCATCTGCAAACAAAAGtatgtgtgg--atttatgcacaaggaggcttcttatgtaggacattaccaagtgt---taacaatggtgtctccagttgaggggatctgagctaatctttttttt-----ctttc----tttttttttggaggcagattcttgctctgtcacccagggtggagtgcagtggcatgatctcagcttgctgcaa s panTro4.chr10 76423097 376 + 133524379 GTCCACCTCCGTACAACACGTG-TATCACAATAAAGGAGCAAGCAACTAAGTCACAGCAATAGCCACCCAACAGAACAATGATCTGAACCAGGTTCCCAGGTTCCAGTGACATGCAAAGATGTAAG----GGACACACCACGGGGTGGGGAGGCCCGATCGGCATCATTTCACTTATATTTATCTGCATCTGCAAACAAAAGtatgtgtgg--atttatgcacaaggaggcttcttatgtaggacattaccaagtgt---taacaatggtgtctccaagtgaggggatccgagctaatctttttttt-----ctttc---ttttttttttggaggcagattcttgctctgtcacccagggtggagtgcagtggcatgatctcagcttgctgcaa i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76091132 375 - 133410057 GTCCACCTCCGTACAACACGTG-TATCACAATAAAGGAGCAAGCAACTAAGTCACAGCAATAGCCACCCAACAGAACGATGATCTGAACCAGGTTCCCAGGTTCCAGTGACATGCAAAGACGTAAG----GGACACACCACAGGGTGGGGAGGCCCGACCGGCATCATTTCACTTATATTCATCTGCATCTGCAAACAAAAGTATGCGtgg--atttatgcacaaggaggcttcttatgtaggacattaccaagtgt---taacaatggtgtctccaggtgaggggatccaagctaatctttttttt-----ctttc---ttttttttttggaggc-gattcttgctctgtcacccagactggagtgcagtggcatgatctcagctcgctgcaa i ponAbe2.chr10 C 0 I 1700 s nomLeu3.chr18 35034194 378 + 104879549 GTCCACCTCCGTACAACACGTG-TATCACAATAAAGGAGCAAGCAACTAAGTCACAGCAATAGCCACCCAACAGAATGATGATCTGAACCAGGTTCCCAGGTTCCAGTGACATGCAAAGACGTAAG----GGACACACCACAGGGTGGGGAGGCCCAATCGGCATCATCTCACTTATATTTATCTGCATCTGCAAACAAAAGTATGCGtgg--atttatgcacaaggaggcttcttatgcaggacattaccaagtgt---taacaatggtgtctccaggtgaggggatccaagctaatctttttttt-----tcttt-ctttttttttttggaggcagattcttgctctgtcactcaggctggagtgcagtggcatgatctcagctcactgcaa i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73827473 372 - 130959383 GTCCACCTCCATACAACAGGTGTTATCACAATAAAGGAGCAAGCGACTAAGTCACAGCAATAGCCACACGACAGAATGACGATCTGAAGCAGGTTCTCAGGTTCCAGCGACATGCAAAGATGTAAG----GGACGCACCACGGGGTGGGGAGGCCCGATCGGCATCATTTTACTTATATTTATCTGCATCTGCATACACAAGTATGCGtgg--atttatgcacaaggaggcttcttacgcaggacattaccaagtgt---tagcaatggtgtctccaggtgaggggatctgagataatctttttttc-------------ttttttttttggagacggattctcgctctgtcacccaggctggagtgcagtggcatgatctcagctcactgcaa i rheMac3.chr9 C 0 I 1 s macFas5.chr9 75388760 372 - 133195287 GTCCACCTCCATACAACAGGTGTTATCACAATAAAGGAGCAAGTGACTAAGTCACAGCAATAGCCACACGACAGAATGACGATCTGAAGCAGGTTCTCAGGTTCCAGCGACATGCAAAGATGTAAG----GGACGCACCACGGGGTGGGGAGGCCCGATCGGCATCATTTTACTTATATTTATCTGCATCTGCATACACAAGTATGCGtgg--atttatgcacaaggaggcttcttacgcaggacattaccaagtgt---tagcaatggtgtctccaggtgaggggatctgagataatctttttttc-------------ttttttttttggagacggattctcgctctgtcacccaggctggagtgcagtggcatgatctcagctcactgcaa i macFas5.chr9 C 0 I 1 s papAnu2.chr9 73253492 388 - 125196307 GTCCACCTCCATACAACAGGTGTTATCACAATAAAGGAGCAAGCGACTAAGTCACAGCAATAGCCACACGACAGAATGACGATCTGAAGCAGGTTCTCAGGTTCCAGCGACATGCAAAGATGTAAGGGACGGACGCACCACGGGGTGGGGAGGCCCAATCAGCatcatttcacttatatttatCTGCATCTGCATACACAAGTATGCGTGG--ATTTATGCACAAGGAGGCTTCTTACGCAGGACATTACCAAGTGT---TAACAATGGTGTCTCCAGGTGAGGGGATCCgagataatctttttttctttctttttt-ttttttttttttggagatggattctcgctctgtcacccaggctggagtgcagtggcatgatctcagctcactgcaa i papAnu2.chr9 C 0 I 1 s chlSab2.chr9 72085499 379 - 125710982 GTCCACCTCCATACAACAGGTGTTATCACAATAAAGGAGCAAGCAACTAAGTCACAGCAATAGCCACACGACAGAATGACGATCTGAAGCAGGTTCTCAGGTTCCAGCGACATGCAAAGATGTAAG----GGACGCACCACAGGGTGGGGAGGCCCGATCGGCATCATTTCACTTATATTTATCTGCATCTGCATACACAAGTATGCAtgg--atttatgcacaaggaggcttcttacgcaggacattaccaagtgt---taacaatggtgtctccaggtgaggggatccgagataatctttttttc-----ttttt-ttttttttttttggagacggattctcactctgtcacccaggctggagtgcagtggcatgatctcagctcactgcaa i chlSab2.chr9 C 0 I 1 s calJac3.chr12 75542635 361 - 121768101 GTCCACCTCCATACAACACGTG-TATCAC---AAAGGAGCAAGCAACTAAGTCACAGCAACAGCCACACAACAAAACGACAGTCTG----------CCAGGTTCCAGTGACATGCAGAGATGTAAG----GGACACACCATGGGGTGCGGAGG-CTGATCAGCATCATCCCACTTACACTAA-CTGCATCCACACATATGAGTATGAATGA--ATTTATGCACAAGGAGG-TTCCTATGGAGGACATTACCAAGTGTTGCTAAACAGGACATCACCAGGTAAGGGGATCTGAGATAAACtttttttc-----ctttctttctttttttttggagacagagtctcactctgccacccaggctgg-----agtggcatcatctcagctcactgcaa i calJac3.chr12 C 0 C 0 s canFam3.chr4 27706928 299 + 88276631 TTCCACCTCCAAAACCTACATC-TATCTCAATAAAGCAGCAGGTAGCTGAATCCCAGTAAGCGTCATACAAAGCCATTATGAAC-GATACGGAT---CAGGATTTACCAGCAGGGAGAGATGTGTG----------------------AGCAGACAGGTGAGCGTAATCTCACTTCTATAAATCTG----------TACAAAGATGCATGGCCAATCACGCATGGAGAGG-TTCCTATGAAGGACCCT--------T---CTATGAAGGCACCTCCAGGTGAGGGGACTTGGGACAATCCTTACTTT-------------CTGATCTTCTAAACGA----TTTAAATCTCTTATTAA----------CAGCggca------------------- i canFam3.chr4 C 0 C 0 e mm10.chr14 24152047 1754 + 124902244 I a score=1883.000000 s hg38.chr10_KI270825v1_alt 52751 1 + 188315 t s panTro4.chr10 76423473 1 + 133524379 c i panTro4.chr10 C 0 C 0 s nomLeu3.chr18 35034572 1 + 104879549 c i nomLeu3.chr18 C 0 I 1 s rheMac3.chr9 73827846 1 - 130959383 c i rheMac3.chr9 I 1 C 0 s macFas5.chr9 75389133 1 - 133195287 c i macFas5.chr9 I 1 C 0 s papAnu2.chr9 73253881 1 - 125196307 c i papAnu2.chr9 I 1 C 0 s chlSab2.chr9 72085879 1 - 125710982 c i chlSab2.chr9 I 1 C 0 s calJac3.chr12 75542996 1 - 121768101 c i calJac3.chr12 C 0 I 1 e canFam3.chr4 27707227 0 + 88276631 C e mm10.chr14 24152047 1754 + 124902244 I e ponAbe2.chr10 76091507 1700 - 133410057 I a score=171091.000000 s hg38.chr10_KI270825v1_alt 52752 55 + 188315 tccacctcctgggt--tccaatgatt---------ctcctgcctcagcc----tctcaagtagctgggat s panTro4.chr10 76423474 55 + 133524379 tccacctcctgggt--tccaatgatt---------ctcctgcctcagcc----tctcaagtagctgggat i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76093207 55 - 133410057 tccacctcctgggt--tccaatgatt---------ctcttgcctcagcc----tctcaagtagctgggat i ponAbe2.chr10 I 1700 C 0 s nomLeu3.chr18 35034574 55 + 104879549 tccacctcccgggt--tccaacgatt---------ctcctgcctcagcc----tctcaagtagctgggat i nomLeu3.chr18 I 1 C 0 s rheMac3.chr9 73827847 55 - 130959383 tccacctcccagat--tccaacaatt---------ctcctgcctcagcc----tcccaagtagctgggct i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75389134 55 - 133195287 tccacctcccagat--tccaacaatt---------ctcctgcctcagcc----tcccaagtagctgggat i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73253882 55 - 125196307 tccacctcccagat--tccaacaatt---------ctcctgcctcagcc----tcccaagtagctgggat i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72085880 55 - 125710982 tccacctcccagat--tccaacaatt---------ctcctgcctcagcc----tcccaagtagctgggat i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75542998 55 - 121768101 tccacctcctgggt--tccaatgatt---------ctcctgcctcagcc----tcctgagtagctaggat i calJac3.chr12 I 1 C 0 s canFam3.chr4 27707227 63 + 88276631 -------cctgggtggctcagtggttgagcgtctgcctttggcttagtcgtgatcccgaggtcctgggat i canFam3.chr4 C 0 I 115 e mm10.chr14 24152047 1754 + 124902244 I a score=544909.000000 s hg38.chr10_KI270825v1_alt 52807 197 + 188315 tacaggtgtacaccatcacgcccagctaatttttgtatttttagtagagacagggtttcaccatgttggccaggctg--------------------------------gtctcgaacccctgacctcaggtgatatgcccgtctcagccacccaaagtgctgggattacaggcataggctaccgcgcccagccagagataatcttt-actttatagtcttctgaatgat s panTro4.chr10 76423529 197 + 133524379 tacaggtgtacgccatcacgcccagctaatttttttatttttagtagagacagggtttcaccatgttggccaggctg--------------------------------gtctcgaactcctgacctcaggtgatatgcccatctcagccacccaaagtgctgggattacaggcataggctaccgcgcccagccagagataatcttt-actttatagtcttctgaatgat i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76093262 192 - 133410057 tacaggtgtgcgccaccacgcccagctaatttttgtatttttagtagagacagggtttcaccatgttggccaggctg--------------------------------gtctcgaactcctgacctcaggtgatacgcccgtctcagccacccaaagtgctgggattacaggcataggctaccacgcccggccagagataat------ctttatagtcttctgaatgat i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35034629 197 + 104879549 tacaggtgtgcgccaccacgcccagctaatttttgtatttttagtagagacagggtttcaccatgttggccaggctg--------------------------------gtctcgaactcctgacctcaggtgatacgcccatctcagccacccaaagtgctgggattacaggcataagctaccgcgctcggccagagataattttt-actttatagtcttctgaatgat i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73827902 195 - 130959383 taaaggtgtgcaccatcatgcccagctaatttttg--tttttagtagagacggggtttcaccatgttggccgtgctg--------------------------------gtctcaaactcctgacctcaggtgatccgcccatctcaaccacccaaagtgttgggattacaggcataagctatctcacctagccagagacaatcttt-actttttagtcttctgaattat i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75389189 195 - 133195287 tacaggtgtgcaccatcatgcccagctaatttttg--tttttagtagagacggggtttcaccatgttggccaggctg--------------------------------gtttcaaactcctgacctcaggtgatccgcccatctcaaccacccaaagtgttgggattacaggcataagctctctcacctagccagagataatcttt-actttttagtcttctgaattat i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73253937 195 - 125196307 tacaggtgtgcaccatcaggcccagctaatttttg--tttttagtagagacagggtttcaccatgttggccaggctg--------------------------------gtctcaaactcctgacctcaggtgatccgcccatttcaaccacccaaagtgttgggattacaggcataagctatcTCGCCTAGCCAGAGATAATCTTT-ACTTTTTAGTCTTCTGAATTAT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72085935 196 - 125710982 tacaggtgtgcaccatcatgcccagctaatttttg--tttttagtagagacggggtttcaccatgttggccaggctg--------------------------------gtctcaaactcctgacctcaggtgatccgcccatctcaaccacccaaagtgttgggattacaggcataagctatctcgcctaaccagagataatctttaactttttagtcttctgaattat i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75543053 229 - 121768101 tacaggcacctgctaccacacctggctaatttttgtatttttagtagacatggggtttcaccatgtgggccagactggtctcaaactcctgacctcaagtgatccgcccgtctcaaactcctgacctcaagtgatccgcccgtctcagcctcccaaagtgctgggattataggcatgagcaactgcgcccagccAGAGATTATCTTT-ACTTTTTAGTCTTCTGAATGAT i calJac3.chr12 C 0 C 0 e canFam3.chr4 27707290 115 + 88276631 I e mm10.chr14 24152047 1754 + 124902244 I a score=712157.000000 s hg38.chr10_KI270825v1_alt 53004 272 + 188315 ttgaa-ttgtttgtaatatgcatagaagttttctctaaacaacaGCTGCTTCTCAAAAGAGGTTTAT-AAAGTATAC-TTAAACTATTAAAAATAGCTAAAAACATAATATTAAGGGAGATTTGATTATGTACA--------TAAATAATAAAGCATGTTtatatatatatatatatatatatatatatatatatatatatatat--CCAAAGGGTAATGGCAATTGAATCTCTTGTTGAAGAAATAATCTGTGACTTTTTTCttctttctacttttctgttttt s panTro4.chr10 76423726 251 + 133524379 ttgaa-ttgtttgtaatatgcatagaagttttctctaaacaacaGCTGCTTCTCAAAAGAGGTTTAT-AAAGTATAC-TTAAACCATTAAAAATAGCTAAAAACATAACATTAAGGGAGATTTGATTATGTACA--------TAAATAATAAAGCATG---------------------AGatatatatatatatatatatatat--CCAACGGGTAATGGCAATTGAATCTCTTGTTGAAGAAATAATCTGTGACTTTTTTCttctttctacttttctgttttt i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76093454 267 - 133410057 ttgaa-ttgtttgtaataggcataGAAGTTTTCTCTAAACAATAGCTGCTTCTCAAAAGAGGTTTAT-AAAGTATAC-TTAAACTATTACAAATAGCTAAAAACATAACATTAAGGGAGATTTGATTATGTACA--------TAAATAATAAAGCATG-----atatatatatatatatatatatatatatatatatatatatTT--CCAAAGGGTAATGGCAATTGAATCTCTTGTTGAAGAAATTATCTGTGACTTTTTTCttctttctacttttctgttttt i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35034826 231 + 104879549 ttgaa-ttgtttgtaatatgcatagaagttttctctaaacaataGCTGCTTCTCAAAAGAGGTT--------------ATAAACTATTACAAATAGCTAAAAACATAACATTAAGGGAGATGTGATTATGTACA--------TAAATAATGAAGCATG----------------------------TA-ATGTATATATATATTT--CCAAAGGGTAATGGCAATTGAATCTCTTGTTGAAGAAATTATCTGTGACtttttttctctttctacttttccgttttt i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73828097 244 - 130959383 ttgaa-ttgtttataatatgca---aagttttctctaaacaataGCTGCTTCTCAAAAGAGGTTTAT-AAAGTATAC-TTAAACTATCACAAATAGCTAAAAACATAACATTAAGGGAGATGTAATTATGTACA--------TAAATAATAAAGCATG-------------------------TAATATATATACATATATATTT--CCAAAGGGTAAAGGCAATTGAATCTCTTGTTGAAGAGATTATCTGTGACTTTTTTCTTCTCTCTACTTGTCTGCtttt i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75389384 244 - 133195287 ttgaa-ttgtttataatatgca---aagttttctctaaacaataGCTGCTTCTCAAAAGAGGTTTAT-AAAGTATAC-TTAAACTATCACAAATAGCTAAAAACATAACATTAAGGGAGATGTAATtatgtaca--------taaataataaagcatg-------------------------taatatatatacatatatatTT--CCAAAGGGTAAAGGCAATTGAATCTCTTGTTGAAGAGATTATCTGTGACTTTTTTCTTCTCTCTACTTGTCTGCtttt i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73254132 240 - 125196307 TTGAA-TTGTTTATAATATGCA---AAGTTTTCTCTAAACAATAGCTGCTTCTCAAAAGAGGTTTAT-AAAGTATAC-TTAAACTATTACAAATAGCTAAAAACATAACATTAAGGGAGATGTAATTATgtaca--------taaataataaagcatg-------------------------taatatatatacatatatattt--ccaaaGGGTAAAGGCAATTGAATCTCTTGTTGAAGAGATTATCTGtgacttttttct----tctacttgtctgctttt i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72086131 244 - 125710982 ttgaa-ttgtttataatatgca---aagttttctctaaacaataGCTGCTTCTCAAAAGAGGTTTAT-AAAGTATAC-TTAAACTATTACAAATAGCTAAAAACATAACATTAAGGGAGATGTAATtatgtaca--------taaataataaagcatg-------------------------taatatatatacatatatatTT--CCAAAGGGTAAAGGCAATTGAATCTCTTGTTGAAGAGATTATCTGTGACTTTTTTCTTCTCTCTACTTGTCTGCtttt i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75543282 253 - 121768101 GTCAATTTTTTTATAATATGCATAAAAGTTTTCTCTAAACAATAGCTGCTTCTCAAAAGAGGTTTAT-AAAGTATAC-TTGAACTATTACAAATAGCTAAAAACATAATGTTAAGGGAAATGTGATTATATACA--------TAAATAATAAAGCATG-----------------CATTCTACATACATATATATATATGTAGCT--CCAAAAGGTAATGACAATTGACTCTCTTGTTGAAGAGATTATATGTGACTTTCttctt---tctacttttcttttttt i calJac3.chr12 C 0 C 0 s canFam3.chr4 27707405 236 + 88276631 ATAAA-TTTCTTATAACATGCACAAAAGTTTTCTCAGAATAA-GGCTGTGTAGTCAAAGAGGTTTATAAAAGCACGCTTTGTGATATTACAAACACC------------GTGAAATGAGA-GTGTTCACGTACAAAAAGATGCAAATTATAAAACAAG--------------------CCTTTAAACATACACACATATACACTTAGCAAAAGGGGAAGGGCAA------------CTGAGGAGATGACACGTGACTT--TTCTTCTTTCTACTTTCCTCATCTT i canFam3.chr4 I 115 C 0 e mm10.chr14 24152047 1754 + 124902244 I a score=910370.000000 s hg38.chr10_KI270825v1_alt 53276 298 + 188315 tattttttgagacagagtctcgctctgtcacccaggctggagtgcagtggcgcaatctcagctcactgcaacctccgcctcccgggttcaagcaattctcctgcctcagcctcctgagtagcagggactacaggtgcctgccaccgtgcctggctaatttttgtatttttagtagagacggggtttcaccatgttggccaggttggtcttgaactcctgacctccagtgatccacctgcctcggcctcc-------------ttacaggtgtgaaccacagcactcggccTTCTTTCTACTTTTCTATGTC s panTro4.chr10 76423977 298 + 133524379 tattttttgagacagagtctcgctctgtcacccaggctggagtgcagtggcgcaatctcagctcactgcaacctccgcctcccgggttcaagcaattctcctgcctcagcctcccgagtagcagggactacaggtgcccgccactgtgcctggctaatttttgtatttttagtagagacggggtttcaccatgttggccaggttggtcttgaactcctgacctccagtgatccacctgcctcggcctcc-------------ttacaggtgtgaaccacagcactcggccTTCTTTCTACTTTTCTATGTC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76093721 298 - 133410057 tattttttgagatggagtctcgctctgtcacccaggctggagtgcaatggcgcgatctcagctcactgcaacctccgcctcccgggttcaagcaattctcctgcctcagcctcccgagtagcagggactacaggtgcccgccaccatgcctggctaatttttgtatttttagtagagatggggtttcaccttgttggccaggttggtctcaaactcctgacctccagtgatccacctgcctcggcctcc-------------ttacaggcgtgaaccacagcactcggccTTCTTTCTACTTTTCTATGTC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35035057 311 + 104879549 tattttttgagacggagtctcgctctgtcacccaggctggagtgcactggcacaatctcagctcactgcaacctctgcctcccgggttcaagcaattctcctgcctcagcctcctgagtagcagggactacaggtgcccgccaccatgcctggctaatttttgtatttttagtagagatggggtttcgccatgttggccaggctggtctcgaactcctgacctccagtgatccacctgcctcggcctcccaaagtgctgggattacaggcgtgaaccacagtactcagccTTCTTTCTACTTTTCTATGTC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73828341 311 - 130959383 tattttttgagacggagtcttactctgtcacccaggctggagtgcagtgctgcgatctcagctcactacaacctccgcctcccgggttcaagcaattctcctgcctcagcctcccgagtagcagggactacaggcgcccgccaccatgcctggctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtctcgaattcctgacctcaggtgatccacctgcctcagcctcccaaagtgctgggattataggcatgaaccaccgcactcagccTTCTTCCTACTTTTCTATGTC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75389628 311 - 133195287 tattttttgagacggagtcttactctgtcacccaggctggtgtgcagtgctgcgatctcagctcactacaacctccgcctcccgggttcaagcaattctcctgcctcagcctcccgagtagcagggactacaggcgcccgccaccatgcctggctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtctcgaattcctgacctcaggtgatccacctgcctcagcctcccaaagtgctgggattataggcatgaaccaccgcactcagccTTCTTCCTACTTTTCTATGTC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73254372 311 - 125196307 tattttttgagacggagtcttactctgtcatccaggctggagtgcagtgccgcgatctcagctcactacaacctctgcctcccgggttcaagcaattctcctgcctcagcctcctgagtagcagggactacaggcgcctgccaccatgcctgactaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtctcgaattcctgacctcaggtgatccacctgcctcagcctcccaaagtgctgggattacaggcatgaaccaccgcactcGGCCTTCTTCCTACTTTTCTATGTC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72086375 311 - 125710982 tattttttgagacggagtcttactctgtcacccaggctggagtgcagtgccgcgatctcagctcactacaacctctgcctcctgggttcaagcaattctcctgcctcagcctcctgagtagtagggactacaggcgcctgccactatgcctggctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtctcaaattcctgacctcaggtgatccacctgcctcagcctcccaaagtgctgggattacaggcatgaaccaccgcactcggccTTCTTCCTACTTTTCTATGTC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75543535 310 - 121768101 tattttttgagatggagtatcactctgttgcccaggctggagtgcgatgacgcaatctcagcttactgcaatctctgcttcccagattcaagtgattctcctgcctcagcctcctgagtagctgggagtacaagcacctaccgccacgcctggctaatttttgtatttttagtagagatggaacttcaccatgttggtcagactggtcttgaactcctgaccttaggtgatccacccgccttggcttcc-caagtgcaaggattataggcatgagccaccacacccagccTTCTTTCTACTTTTCTATGTC i calJac3.chr12 C 0 C 0 e canFam3.chr4 27707641 0 + 88276631 C e mm10.chr14 24152047 1754 + 124902244 I a score=1238614.000000 s hg38.chr10_KI270825v1_alt 53574 393 + 188315 TCTGATTTTCCATAACAAG----TATAAAATACTGTACTTCAGAATCTGGGAAACGG-GGCCATTTTTAAAAAGAAAGCTGTTGCTCAGTCAGGTCACACATGTCAAATTTCATCTCCAATCGGATCCTAACCACCGTGAGGGCAGGAGTCACTCACATTTTTCTCCCTCCTGGAGCAGGTCCTGGCTCTCCGTGCCCTGTGGGGAGCTAA----GGGAATGCTTGGCAGTGGGTGGCAAGGCCTTTTCCACAACTGAAGAACCCACTTCACTTGGGGAAGGTCCCGTCCTCTCTGTGGCCAGGGCCGGGGCTGAGTAAAACAGGCCAGCATGCTCCTGCGCGTGCCACATGGTAAGAGCTCCGTCAGCATTTCTTCCGAGTTACACCCGATTCCCCTACTG s panTro4.chr10 76424275 393 + 133524379 TCTGATTTTCCATAACAAG----TATAAAATACTGTACTTCAGAATCTGGGAAACAG-GGCTATTTTTAAAAAGAAAGCTGTTGCTCAGTCAGGTCACACATGTCAAATTTCATCTCCAATCGGATCCTAACCACCATGAGGGCAGGAGTCACTCACATTTTTCTCCCTCCTGGAGCAGGTCCTGGCTCTCCGTGCCCTGTGGGGAGCTAA----GGGAATGCTTGGCAGTGGGTGGCAAGGCCTTTTCCACAACTGAAGAACCCACTTCACTTGGGGAAGGTCCCGTCCTCTCTGTGGCCAGGGCCGGGGCTGAGTAAAACAGGCCAGCATGCTCCTGCGCGTGCCACATGGTAAGAGCTCCGTCAGCATTTCTTCCGAGTTACACCCGATTCCCCTACTG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76094019 391 - 133410057 CCTGATTTTCCATAACAAG----TATAAAATACTATACTTCAGAATCTGGGAGAC---GGCTATTTTTAAAAAGAAAGCTGTTGCTCAGTCAGGTCTCACATGTCAAATTTCATCTCCAATCAGATCCTAACCACCATGAGGGCAGGAGTCACTCACATTTTTCTCCCTCCTGGAGCAGGTCCTGGCTCTCCGTGCCCTGCGGGGAGCTAA----GGGAATGCTTGGCAGTGGGTGGCAAGGCCCTTTCCACAACTGAAGAACCCACTTCACTTGGGGAAGGTCCTGTCCTCTCCGTGGCCAGGGCCGGGGCTGAGTAAAACAGGCCAGCATGCTCCTGCGCGTGCCACACGGTAAGAGCTCCGTCAGCATTTCCTCCGAGTTACACCCGATTCCCCTATTG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35035368 393 + 104879549 CCCGATTTTCCATAATAAG----TATAAAATACTATACTTCAGAATCTGGGAAACGG-GGCTATTTTTAAAAAGAAAGCTGTTGCTCAGTCAGGTCACACATGTCAAATTTCATCTCCAATTGGATCCTAACCACCATGAGGGCAGGAGTCACTCACATTTTTCTCCTTCCTGGAGCAGGTCCTGGCTCTCCGTGCCCTGTGGGGAGCTAA----GGGAATGCTTGGCAGTGGGTGGCAAGGCCCTTTCCACGACTGAAAAACCCACTTCACTTGGGGAAGGTCCCGTCCTCTCCGTGGCCAGGGCCGGGGCTGAGTAAAACAGGCCAGCATGCTCCTTCGCGTGCCACATGGTAAGAGCTCCATCAGCATTTCCTCCGAGTTATACCCTGACCCCCTATTG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73828652 393 - 130959383 CCCGATTTTCCATAACAAA----TATAAAATACTATACTTCAGAATCTGGGAAACAG-GGCTGTTTTTAAAAAGAAAGCTGTTGCTCAGTCAGGTCACACATGTCAAATTTCATCTCCAATCGGATCCTAACTACCATGAGGGCAGGAGTCACTCACATTTTTCTCCCTTCTGGAGCAGGTCCTGGCTCTCCATGCCCTGCAAGGAGCTAA----GGGAATGCCTGACGGTGGGTGGCAAGGCCCTTTCCACAACTGAAGAACCCACTTCACTTGGGGAAAGTCCCGTCCTCTCCGTGGCCAGGGCCGGGGCTGAGTAAAACAGGCCAGCATGCTCCTGCACGTGCCACATGGTAAGAGCTCCGTCAGCACTTCCTATGAGTTACACCCAATTCCCCTATTG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75389939 393 - 133195287 CCCGATTTTCCATAACAAA----TATAAAATACTATACTTCAGAATCTGGGAAACAG-GGCTATTTTTAAAAAGAAAGCTGTTGCTCAGTCAGGTCACACATGTCAAATTTCATCTCCAATCGGATCCTAACTACCATGAGGGCAGGAGTCACTCACATTTTTCTCCCTTCTGGAGCAGGTCCTGGCTCTCCATGCCCTGCAAGGAGCTAA----GGGAATGCCTGACGGTGGGTGGCAAGGCCCTTTCCACAACTGAAGAACCCACTTCACTTGGGGAAAGTCCCGTCCTCTCCGTGGCCAGGGCCGGGGCTGAGTAAAACAGGCCAGCATGCTCCTGCACGTGCCACATGGTAAGAGCTCCGTCAGCACTTCCTATGAGTTACACCCAATTCCCCTATTG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73254683 393 - 125196307 CCCGATTTTCCATAACAAG----TATAAAATACTATACTTCAGAATCTGGGAAACgg-ggctatttttaaaaagaaagctgttGCTCAGTCAGGTCACACATGTCAAATTTCATCTCCAATCGGATCCTAACCACCATGAGGGCAGGAGTCACTCACATTTTTCTCCCTTCTGGAGCAGGTCCTGGCTCTCCATGCCCTGCAAGGAGCTAA----GGGAATGCCTGACGGTGGGTGGCAAGGCCCTTTCCACAACTGAAGAACCCACTTCACTTGGGGAAAGTCCCGTCCTCTCCGTGGCCAGGGCCGGGGCTGAGTAAAACAGGCCAGCATGCTCCTGCACGTGCCACATGGTAAGAGCTCCGTCAGCACTTCCTATGAGTTACACCCAATTCCCCTATTG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72086686 371 - 125710982 CCCAATTTTCCATAACAAG----TATAAAATACTATACTTCAGAATCTGGGAAACGG-GGCTATTTTTAAAAAGAAAGCTGTTGCTTAGTCAGGTCACACATGTCCAATTTCATCTCCAATCGGATCCTAACCACCATGAGGGCAGGAGTCACTCACATTTTTCTCCCTTCTGGAGCAGGTCCTGGCTCTCCATGCCCTGCAAGGAGCTAA----GGGAATGCCTGACGGTGGGTGGCAAGGCCCTTTCCACAACTGAAGAACCCACTTCACTTGGGGAAAGTCCCATCCTCTCTGTGGCCAGGGCTGGGGCTGAGTAAAACAGGCCAGCATGCTCCTGCACGTGCCACATGGTAAGAGTTCCGTCAGCACTT----------------------CCTATTG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75543845 379 - 121768101 CCTGATTTTTTATAACAAG----TATAAAATAC---ACTTCAGAATCTGGAAAGT-G-GGCTATCTGTAAAAAGAAAGCTGTTGCTCGGTCAGGTCACACATGTCCAATTTCATCTCCAATCTGACCCTAACTCCCATGAGGGCAGGAGTCACTCACACTTTTCTTCCTCCTGGAACAGCTTCTGGC-CTCCACACTCTGCAGGGAGCTAA----GGGAATGCTTGATGGTGGGTGGCAAGGCCTTCTTCACGACTGAAGAACCCACTTCACTCGGGGAAGGCCCTGTCCTCTC--TGGCCAGGGAAGGGGCTGAGTAAA-------AATGTGCTCCTGCATGTTCCACATGGTAAGAGCTCCATCAGCATTTCTGATGAGGTACATCCGATTCCCCTACTG i calJac3.chr12 C 0 C 0 s canFam3.chr4 27707641 366 + 88276631 TCTGGATTCTGCTAATGAGAAGTTACATGATAATGTACTTTAGAATCAGGGGGAAAGCAGCTGTCTT--------------TCCTTCAGTCGGGTCACACATGAT-AACTACGCCTCTGACCGGACAGGAAGCACTGTGAGGGCAGGAG-CACGGACACTTGCCT--CTCCCAGAGCAGGCCCT-GTTCTCTGGACGCTGCGGGAAGCTAACTATGGGGACACCTGATGGCAGGTGTCAAGGTCCTTTCTGCTTCTAAGGAACCCGCCTGAGTTGGTGGAAGGTCTCACTCCTCAGTGACCTGAGCTGGGGTGAAGTGACCCAGGAC--------TTGGGGCGCATCACGTGG-GTGAGATGTGCCA--------CATGAACTGCATCTGCATCCCCTACTG i canFam3.chr4 C 0 I 106 e mm10.chr14 24152047 1754 + 124902244 I a score=1101486.000000 s hg38.chr10_KI270825v1_alt 53967 399 + 188315 GGGCCAGGCCTCTGTGTTTTGCTGTCCTTCCGTTACCCCTCAGGTTCTCTGGTTGGTTGCCTTTTAAGTTCAGATTTTCAAGTCAAATATAAGATTTTCTCTggctgggcacggtggctcacgtctgtaatcccaacactgtgggaggccgaggcgggtggatcacctgaggtcaggagttcaagataagcttgaccaacatggtgaaaccctatctctactaaaaatacaaaaattagccaggcgtggtggtgggcgcctgtaatctcagctactcaggaggctgaggcacaagaatcgccttgaacttgggaggcagagattgcagtgagccaagattgcaccactgtactccagcctgggcgaaaagagcaaaactctgtctc-------aaaa-aaaaaTATG s panTro4.chr10 76424668 399 + 133524379 GGGCCAGGCCTCTGTGTTTTGCTGTCCTTCCGTTACCCCTCAGGTTCTCTGGTTTGTTGCCTTTTAAGTTCAGATTTTCAAGTCAAATATAAGATTTTCTCTggctgggcacggtggctcacgtctgtaatcccaacactgtgggaggccgaggcgcgtggatcacctgaggtcaggagttcaagacaagcttgaccaacatggtgaaaccctatctctactaaaaatacaaaaattagctaggcgtggtggtgggcgcctgtaatctcagctactcaggaggctgaggcacaagaatcgccttgaacttgggaggcagagactgcagtgagccaagattgcaccactgtactccagcctgggcgaaaagagcaaaactctgtctc-------aaaa-aaaaaTATG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76094410 399 - 133410057 GGGCCAGGCCTCTGTGTTTTGCTGTCCTTCCGTTACCCCTCAGGTTCTCTGGTTTGTTGCCTTTTAAGTTCAGATTTTCAAGTCAAATACAAGATTTTCTCTggctgggcgcggtggctcacgtctgtaatcccaacactgtgggaagccgaggcgtgcggatcacctgaggtcaggagttcaagaccagcttgaccaacatggtgaaaccccatctctactaaaaatacaaaaattagccaggcgtggtggtgggcgcctgtaatctccgctactcaggaggctgaggcacaagaatcaccttgaacttgggaggcagagattgcagtgagccaaaattgcaccactgtactccagcctgggcgaaaagagcaaaactctgtctc-------aaaa-aaaTATATA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35035761 400 + 104879549 GGGCCAGGCCTCTGTATTTTGGTGTCCTTCCGTTACCCCTCAGGTTCTCTGGTTTGTTGCCTTTTAAGTTCAGATTTTCAAGTCAAATATAAGATTTTCTCTggctgggcgcagtggcttacgtctgtaatcccaacactgtgggaggccaaggcgcgcagatcacctgaggtcaggagttcaagaccagcttgaccaacatggtgaaaccccatctctactaaaaatacaaatactagccaggcgtggtggtgggcgcctgtaatctcagctactcagaaggctgaggcacaagaatcgccttgaacttgggaagcagagattgcagtgagccaagattgcaccactgtactccagcctgggcgaaaagagcaacactctgtctc------aaaaa-aaaaaaaTA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73829045 403 - 130959383 GGGCCAGGCCGCTGAGTTTTGGTGTCTTTCTGTTACCCCTCAGGTTCTCTGGTTTGTTGCCTTTTAAGTTCAGATTTTCAAGTCAAATATAAGATTTTCTCTggctgggtgcggtggctcacgtctgtaatcccaacattttgggaggccaaggcccatggatcacctgaggtcaggagttcaagaccagcttgaccaacatggtgaaaccccgtctccaccaaaactacgcgaattagccaggcgtggtggtgggcgcctgtaatcccagccactcgggaggctgaggcaagagaatca-cttgaactggggaggcggagattgcagtgagccaagattgccccactgcactccagcctgggggacaagagcaaaa--ctgtctcaacaaaaaaaa-aagaaaaGG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75390332 403 - 133195287 GGGCCAGGCCGCTGAGTTTTGGTGTCTTTCTGTTACCCCTCAGGTTCTCTGGTTTGTTGCCTTTTAAGTTCAGATTTTCAAGTCAAATATAAGATTTTCTCTggctgggtgcggtggctcacgtctgtaatcccaacattttgggaggccaaggcccacggatcacctgaggtcaggagttcaagaccagcttgaccaacatggtgaaaccccgtctccaccaaaaatacgcgaattagccaggcgtggtggtgggcgcctgtaatcccagccactcgggaggctgaggcaagagaatca-cttgaactggggaggcggagattgcagtgagccaagattgcaccactgcactccagcctgggggacaagagcaaaa--ctgtctcaacaaaaaaaa-aaaaaaaGG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73255076 403 - 125196307 GGGCCGGGCCGCTGTGTTTTGGTGTCCTTCCGTTACCCCTCAGGTTCTCTGGTTTGTTGCCTTTTAAGTTCAGATTTTCAAGTCAAATATAAGATTttctctggctgggcgcggtggctcacgtctgtaatcccaacattttgggaggccaaggcccacggatcacctgaggtcaggagttcaagaccagcttgaccaacatggtgaaaccccgtctccaccaaaaatacacaaattagccaggcgtggtggtgggcgcctgtaatcccagccactcgggaagctgaggcaagagaatca-cttgaactggggaggcggagattgcagtgagccaagattgcaccactgcactccagcctgggggacaagagcaaaa--ctgtctcaacaacaacaa-caaaaaaga i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72087057 404 - 125710982 GGGCGGGGCCGCTGTGTTTTGGTGTCCTTCCGTTACCCCTCAGGTTCTCTGGTTTGTTGCCTTTTAAGTTCAGATTTTCAAGTCAAATATAAGATTTTCTCTggctgggcgtggtggctcacgtctgtaatcccaacattttgggaggccaaggcccacggatcacctgaggtcaggagttcaagaccagcttgaccaacatggtgaaaccccgtctccaccaaaaatacaaaaattagccaggcgtggtggtgggcgcctgtaatcccagccactcgggaggctgaggcaagagaatca-cttgaactggggaggcggagattgcagtgagccaagattgcaccactgcactccagcctgggggacaagagcaaaa--ctgtctcaacaacaacaacaaaaaaaga i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75544224 379 - 121768101 GGGCCAGGCCTCTGTGTTTTGGTGTCCTTTCATTACCCCTCAGGTTCTCTGGTTTCTTGCCCTTTAAGTTCAGACTTTCAAGTCAAACATAAGATTTTCTCTggctgggcccagtggctcatgcctgtaatcccaacactttgggagaccaaggtgcatg----acctgaagtcaggaatttgagatcaggctgaccaacgtggtaaaatctcgtat---ctgaaaatacaaaaattagctgggcatggtagtaggtgcccataatcccagtt-ctcgggaggctgaggtaggagaatca-cttgaacccaggaggtt---------gtgagctaagactacaccactgcactccagcccaggcaac-agagcaagactccatctc-------caaa-aaaaaTAT- i calJac3.chr12 C 0 C 0 e canFam3.chr4 27708007 106 + 88276631 I e mm10.chr14 24152047 1754 + 124902244 I a score=1239500.000000 s hg38.chr10_KI270825v1_alt 54366 386 + 188315 TTTTCTTAACATAGGGCCCAC-----------CCCTGCTGAGGCTCACAGCTAC-AGAGGCCTCAGCTTTCTGGACTCAAATGAAAGAGAGTATCTGTGTTTCTTTT-GGTGATTAAATAAAAGTAAGTTT-------ATCAGAGCTCTTTAAGATCTACAATCTAGACAGAAGCTGTTAAATATAAACACAATCTAGTAAGTTCCATCTAGGGGAACAACAGAGAGGGAT-GTGTGTGCACAGTGCGCGGGG---GTGACGGATTCCATGGAGGAGGTGCCTCTGGACAGACAGCAAGCCTACAGTCAACCTGAAACCT-----AAGATGGACCTACATTCTAAAATGAACCAGTACCAGTAAAAAGCTAGGCTGCACATTTATG---------CTTTCTTCCTGTGTATATTTTATTTCACA s panTro4.chr10 76425067 386 + 133524379 TTTTCTTAACATAGGGCCCAC-----------CCCTGCTGAGGCTCACAGCTAC-AGAGGCCTCAGCTTTCTGGACTCAAATGAAAGAGAGTATCTGTGTTTCTTTT-GGTGATTAAATAAAAGTAAGTTT-------ATCAGAGCTCTTTAAGATCTACAATCTAGACAGAAGCTGTTAAATATAAACACAATCTAGTAAGTTCCAGCTAGGGGAACAACAGAGAGGGAT-GTGTGTGCACAGTGCGTGGGG---GTGACAGATTCCATGGAGGAGGTGCCTCTGGACAGACAGCAAGCCTACAGTCAACCTGAAACCT-----AAGATGGACCTACATTCTAAAATGAACCAGTACCAGTAAAAAGCTAGGCTGCACATTTATG---------CTTTCTTCCTGTGTATATTTTATTTCACA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76094809 386 - 133410057 TTTTCTTAACATAGGGCCCAC-----------CCCTGCTGAGGCTCACAGCTAC-AGAGGCCTCAGCTTTCTGGATTCAAATGAAAGAGAGTATCTGTGTTTCTTTT-GGTGATTAAATAAAGGTAAGTTT-------ATCAGAGCTCTTTAAGATCTACAATCTAGACAGAAGCTGTTAAATATAAACACAATCTAGTAAGTTCCATCTAGGGGAACAACAGAGAGGGAT-GTGTGTGCACAGTGCGCAGGG---GTGACGGATTCCATGGAGGAGGTGCCTCTGGACAGACAGCAAGCCTACAGTCAACCTGAAACCT-----AAGATGGACCTACATTCTAAAATGAACCAGTACCAGTAAAAAGCTAGGCTGCACATTTATG---------CTTTCCTCCTGTGTAAATTTTATTTCACA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35036161 386 + 104879549 TTTTCTTAACATAGGGCCCAC-----------CCCTGCTGAGGCTCACAGCTAC-AGAGGCCTCAGCTTTCTGGATTCAAATGAAAGAGAGTATCTGTTTTTCTTTT-GGTGATTAAATAAAGGTAAGTTT-------ATCAGAGCTCTTTAAGATCTACAATCTAGACAGTGGCTGTTAAATATAAACACAGTCTAGTAAGTTCCATCTAGGGGAACAACAAAGAGGGAT-GTGTGTGCACAGTGTGCAGGG---GTGATGGATTCCATGGAAGAGGTGCCTCTGGATAGACAGCAAGCCTACGGTCAACCTGAAACCT-----AAGATGGACCTGCATTCTAAAATGAACCAGTACCAGTAAAAAGCTAGGCTGCACATTTATG---------CCTTCTTCCTGTGTACATTTTATTTCACA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73829448 390 - 130959383 TTTTCTTAATATAGGGCCCAC-----------CCATGCTGAGGCTCCTAGCTAC-AGAGGCCTCAGCTTTCTGGATTCAAATGAACGAGAGTAGCTGTGTTTCTTTT-GGTGATTAAATAAAGTTTAATTT-----TAATCAGAGCTCTTTAAGATCTACAATCTGGACAGAAGCTATTAAATATAAACACAATCTAGTAAGTTTCGTCTAGGGGAACAACACAGAGGGAT-GTGTGTGCATAGTGCGCA-GG---GGGACGGACTCCACAGAGGAGGTGCCTCTGGACAGACAGCAAGCCTACAGTCAACCTGAAACCT-----AAGATGGACCTGCATTCTAAAATGA------ACCAGTAAAAAgctaggctgtacatttatgctttatacactttcttcctgtgtatattttatttcata i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75390735 391 - 133195287 TTTTCTTAATATAGGGCCCAC-----------CCATGCTGAGGCTCCTAGCTAC-AGAGGCCTCAGCTTTCTGGATTCAAATGAACGAGAGTAGCTGTGTTTCTTTT-GGTGATTAAATAAAGTTTAATTT-----TAATCAGAGCTCTTTAAGATCTACAATCTGGACAGAAGCTATTAAATATAAACACAATCTAGTAAGTTTCGTCTAGGGGAACAACACAGAGGGAT-GTGTGTGCATAGTGCGCAGGG---GGGACGGACTCCACAGAGGAGGTGCCTCTGGACAGACAGCAAGCCTACAGTCAACCTGAAACCT-----AAGATGGACCTGCATTCTAAAATGA------ACCAGTAAAAAgctaggctgtacatttatgctttatacactttcttcctgtgtatattttatttcata i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73255479 391 - 125196307 ttttcttaataTACGGCCCAC-----------CCATGCTGAGGCTCCTAGCTAC-AGAGGCCTCAGCTTTCTGGATTCAAATGAACGAGAGTAGCTGTGTTTCTTTT-GGTgattaaataaagtttaattt-----taatcaGAGCTCTTTAAGATCTAcaatctggacagaagctattaaatataaacacaatCTAGTAAGTTTCGTCTAGGGGAACAACACAGAGGGAT-GTGTGTGCATAGTGCGCAGGG---GGGACGGACTCCACAGAGGAGGTGCCTCTGGACAGACAGCAAGCCTACAGTCAACCTGAAACCT-----AAGATGGACCTGCATTCCAAAATGA------ACCAGTAAAAAGCTAGGCTGTACATTTATGCTTTATACACTTTCTtcctgtgtatattttatttcata i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72087461 391 - 125710982 TTTTCTTAACATAGGGCCCAC-----------CCATGCTGAGGCTCCTAGCTAC-AGAGGCCTCAGCTTTCTGGATTCAAATGAACGAGAGTAGCTGTGTTTCTTTT-GGTGATTAAATAAAGTTTAATTT-----TAATCAGAGCTCTTTAAGATCTACAATCTGGACAGAAGCTGTTAAATATAAACACAATCTAGTAAGTTTCGTCTAGGGGAACAACAGAGAGGGAT-GTGTGTGCATAGTGCGCAGGG---GGGACGGACTCCACAGAGGAGGTGCCTCTGGACAGACAGCAAGCCTACAGTCAACCTGAAACCT-----AAGATGGACCTGCATTCTAAAATGA------ACCAGTAAAAAgctaggctgcacatttatgctttatacactttcttcctgtgtatattttatttcaca i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75544603 405 - 121768101 TTTTCTCAACATAGGGCCCACCCCACAGGGGTCCCTACTGAGGCTTATAGCTAC-AGAGGCCTCAGCTTTCTGAATTCAAATGAACAAGAGTAGCTGTGTTTCTTTC-GGTGATTAAATAAAGGTGAGTTTAAGTTTCATCAGAGCTCTGTAAGATCTACGATCTAGACAGAAGCTATTAAATATAAACAC--TCT-----GTTCCATCTAGGGGAACAGAGAGGCAGGAG-GTGTGTGTAGAGTGCACAGGG---GTGACGTACTTCATGGAGGAGGTGCCTCTGGACAGACAGCAAGCCTACAGTCAACCTGAAACCTAAGCAAAGACGGGCCTGCATTCTAAAATGA------ACCACTAAAGAGCTAGGCTGCACATTTATGCTTTCTGGGCTTTCTTCCTAGGCATATTTTATTTCATA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27708113 414 + 88276631 TTTTCTTAACGCAGAGCCCACCCTGCAGGGT-TCCTTTCACGGCTCACAGTGATGAGGGCCCTCGGCATTCTGGATTTGAGTGGACAAGAGTGGCCCTGTTCCTTTTAAGTGATTAAATAAAAGCAAGCTCCTGTTTAATCAGATCTCCTGAAGACTTATAATCGAGATAGGACCTCTTAACTAGAAATACGATCTGGTCAGTTCTACTCTGAAGAACAACAGAGGTGGGTGGGGTGTGTAGAGCTTGTAGGGGGAGTGAGGGACCCCTTAGAGGAGGCACGTCTGGACTGAT-TCCAGCCTCAAGCTAACCTGAAATCT--CCGCAGACTGGCCAACATTTCAAAATGA------ACGACTAGATGGCTAAGCCACACTCTTACGCTTCACATACTTTTTTTCTATGCATATTTTATTTCACG i canFam3.chr4 I 106 C 0 e mm10.chr14 24152047 1754 + 124902244 I a score=4529564.000000 s hg38.chr10_KI270825v1_alt 54752 1345 + 188315 ACAGAAAGCTT---------CGAATGAGAGGG---------------AAAAAGCAAAGGGTAAGAATgagtcccggt--------------gccagccactaacca---cgtgg---ccacaggtctgtcactccaacg-tctggatccagtttcctcaactgtgaaacagg---gataacaataataacgacactggca-----------gggtccctgtaaggatctcgtgacttagccacacgtaaagtg--cttgaacaAGGGCCCAGGAAGGTG-TAAATGG-------TGCCATGATGGCACGATCACCGTCAGGTCATTTCCAGCATCAT---------CTACTGT-------------------------------------------GAGCCCTCTTGGCTCCCTGCCTTGCCATCCACACACGCCCCACCTCCCTGCATCCAGTGCCCCATGGCACTTACTGGTG---------------ACACCAGCAAATGCTGGGACA-CTCAAGC-------------------------------------------TACTCCTGCTGCTTCTAC--T----AAGCCCCTTCCCTGCA--GAGCCCAGGCCCGCTGCCGGGATGCACACT--GTC--CACTGGTTTACCCACTCCACCGATGACCGGCCATGCTCACCTGTCCTTTCTCCGCTCCCCGAGGGACGCGGGGTTGACAGCGATTCTGGGCAATGTGGAGGCTGAGGTCTGGGACTGGCTACAAGAGGACAGGGTGTCGATGTTCAGGGGTGACTGTGGAGGAGTGCTGCATTCAGAATGTGACACTGAACCTGC--AGAG------AGGAGC-GGGTAAT---GCCGGTGTGAACTCCCATCTCACTTCCCCAACAGCCAAGACCAAGAGGCAGGTGCGATCCAGACACACAGCTCTA--TCCCCACTGCATCGCATAGTCTGGAGCTCAGATGCT-AGGCTCTGCATTGCC-CCCTACC--------CCCCACACCACCAGGCCTACTGCTGGGCTCAGTGAATTTTTACTGACTGACTGAGATGACTATGAAGTTCTCAGCTAAGCCCAGAGACTCCACCATGAG----------GAGTCAGACCGCAGGAAAAGCAGG-AGAGATGGGAATGTCGAGAAGTCCTTACCTCTCTCGGAGCCCACGACACTCCGCGGATATCTTGGTGTTGATGGGATTTTAATGCGTTCCGCCTTGAACTGCAAGTTACTCGAAGAACCTATTGTTCCATAAGGGAACAAAACTTCAGGCCTCATGGTTAAA-CACCACCCT--GTCCTTCCTCTCCACCAGGCTACCAGTCAGG------------ATAATAAATGCAAAGCTGGGCCCTGCTGTTTATTCCCAAGGGAGCCTTGATATGGAACAGTCAAGAAAAGCAGACGTTTAACAT----TTATCTCAATGAACTGTGCAGGCCCAGACTGCTCCAGAACAGGAGCGCACAAGTCTCACTTCCAGCCACGGAACAGCAGCCTAAGAGACACGGCAGCTGCTCCATCTTTTCTCCCCAGCGCCAGAG-----TTCCCCAAGATCTCC-- s panTro4.chr10 76425453 1344 + 133524379 ACAGAAAGCTT---------CAAATGAGAGGG---------------AAAAAGCAAAGGGTAAGAATgagtcccggt--------------gccagccgctaacca---cgtgg---ccacaggtctgtcactccaacg-tctggatccagtttcctcaactgtgaaacagg---gataacaataataacgacactggca-----------gggtccctgtaaggatctcgtgacttagccacacgtaaagtg--cttgaacaAGGGCCCAGGAAGGTG-TAAATGG-------TGCCATGATGGCACGATCACCGTCAGGTCATTTCCAGCATCAT---------CTACTGT-------------------------------------------GAGCCCTCTTGGCTCCCTGCCTTGCCATCCACACACGCCCCACCTCCCTGCATCCAGTGCCCCATGGCACTTACTGGTG---------------ACACCAGCAAATGCTGGGACA-CCCAAGC-------------------------------------------TACTCCTGCTGCTTCTAC--T----AAGCCCCTTCCCTGCA--GAGCCCAGGCCCGCTGCCGGGATGCACACT--GTC--CACTGGTTTACCCACTCCACCGATGACCGGCCACGCTCACCTGTCCTTTCTCCGCTCCCCGAGGGACGCGGGGTTGACAGCGATTCTGGGCAATGTGGAGGCTGAGGTCTGGGACTGGCTACAAGAGGACAGGGTGTCGATGTTCAGGGGTGACTGTGGAGGAGTGCTGCATTCAGAATGTGACACTGAACCTGC--AGAG------AGGAGC-GGGTAAT---GCCGGTGTGAACTCCCATCTCACTTCCCCAACAGCCAAGACCAAGAGGCAGATGCGATCCAGACACACAGCTCTA--TCCCCACTGCATCGCATAGTCTGGAGCTCAGATGCT-AGGCTCTGCATTGCC-CCCTA-C--------CCCCACACCACCAGGCCTACTGCTGGGCTCAGTGAATTTTTACTGACTGACTGAGATGACTATGAAGTTCTCAGCTAAGCCCAGAGACTCCACCATGAG----------GAGTCAGACCGCAGGAAAAGCAGG-AGAGATGGGAGTGTCGAGAAGTCCTTACCTCTCTCGGAGCCCACGACACTCCGCGGATATCTTGGTGTTGATGGGATTTTAATGCGTTCCGCCTTGAACTGCAAGTTACTCGAAGAACCTATTGTTCCATAAGGGAACAAAACTTCAGGCCTCATGGTTAAA-CACCACCCT--GTCCTTCCTCTCCACCAGGCTACCAGTCAGG------------ATAATAAATGCAAAGCTGGGCCCTGCTATTTATTCCCAAGGGAGCCTTGATGTGGAACAGTCAAGAAAAGCAGACGTTTAACAT----TTATCTCAATAAACTGTGCAGGCCCAGACTGCTCCAGAACAGGAGCGCACAAGTCTCACTTCCAGCCACGGAACAGCAGCCTAAGAGACACGGCAGCTGCTCCATCTTTTCTCCCCAGCACCAGAG-----TTCCCCAAGATCTCC-- i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76095195 1343 - 133410057 ACAGAAAGCTT---------CGAGTGAGAGGG---------------AAAAAGCAAAGGGTAAGAATgagtcccggt--------------gccagccgctaacca---cgtgg---ccacaggtctgtcactccaacg-tctggatccagtttcctcaactgtgaaacagg---gataacaataataacgacactggca-----------gggtccctgtaaggatctcgtgacttagccacatgtaaagtg--cttgaacaAGGGCCCAGGAAGGTG-TAAATGG-------TGCCACGATGGCATGATCACCGTCAGGTCGTTTCCAGCATCAT---------CTACTGT-------------------------------------------GAGCCCACTTGGCTCCCTGCCTTGCCATCCACACACGCCCCACCTCCCTGCATCCAGTGCCCCATGGCACTTACTGGTG---------------ACACCAGCAAATGCTGGGACA-CCCAAGC-------------------------------------------TACTCCTGCTGCTTCTAC--T----AAGCCCCTTCCCTGCA--GAGCCCAGGCCCGCTGCCGGGATGCACACT--GTC--CACCGGTTTACCCACGCCACCGATGACTGGCCACACTCACCTGTCCTTTCTCCGCTCCCCGAGGGACGCGGGGTTGACAGCGATTCTGGGCAATGTGGAGGCTGAGGTCTGGGACTGGCTACAAGAGGACAGGGTGTCGATGTTCAGGGGTGACTGTGGAGGAGTGCTGCATTCAGAATGTGACACTGAACCTGC--AGAG------AGGAGC-GGGTAAT---GCCGGTGTGAACTCCCATCTCACTTCCCCAACAGCCAAGACCAAGAGGCAGATGCGATCCAGACACACAGCTCTA--TCCCCACTGCATCGCATAGTCTGGAACTCAGATGCT-AGGCTCTGCGTTGCC-CCCTACC-------GCCCCACATCACCAGGCCTACTGCTGGGCTCAGTGAATTTTTACTGACTGACTGAGATGACTATGAAGTTCTCAGCTAAGCCCAGAGACTCCACCATGAG----------GAGTCAGACCGCAGGAAAAGCAGG-AGAGATGGGAGTGTTGAGAAGTCCTTACCTCTGTCGGAGCCCACGACATTCCGTGGATATCTTGGTGTTGATGGGATTTTAATGCGTTCCGCCTTGAACTGCAAGTTACTTGAAGAACCTATTGTTCCATAAGGGAACAAACCTTCAGGCCTCATGGTTAAA-CACCACCCT--GTCCTCCCTCTCCACCAGGCTACCAGTCAGG------------ATGATAAATGCAAAGCTGGGCCCTGCTGTTTATTCCTGAGGGAGCCTTGATGTGGAACAGTCAAGAAAAGCAGACGTTTAACAT----TTATCTCA---AACTGTGCAGGCCCAGACTGCTCCAGAACAGGAGCGCACAAGTCTCACTTCTAGCCACGGAACAGCAGCCTAAGAGACACGGTGGCTGCTCCATCTTTTCTCCCCAGCGCCAGAG-----TTCCCCAAGATCTCC-- i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35036547 1344 + 104879549 ACAGAAAGCTT---------CAAATGAGAGGG---------------AAAAAGCAAAGGGTAAGAATgagtcccggt--------------gccagccgctaacca---cgtgg---ccacaggtctttcactccaacg-tctggatccagtttcctaaactgtgaaacagg---gataacaataat---gacactggca-----------gggtccctgtaaggatctcgtgacttagccacatgtaaagtg--cttgaacaagggctcaggaaagtg-taaatgg-------tGCCATGATGGCACAATCACCGTCAGGTTGTTTCCAGCATCAT---------CTACTGT-------------------------------------------GAGCCCACTTGGCTCCCTGCCTCGCCATCCACACAAGCCCCACCTCCCTGCATCCAGTGCCCCATGGCACTTACTGGTG---------------ACATCAGCAAATGCTGGGACA-CCCAAAC-------------------------------------------TACTCCTGCTGCTTCTAC--T----AAGCCCCTTCCCTGCA--GAGCCCAGGCCCGCTGCCGGGATGCACACT--GTC--CACTGGTTTACCCACGCCACTGATGACCGGCCACGCTCACCTGTCCTTTCTCCGCTCCCCGAGGGACGCGGGGTTGACAGCGATTCTGGGCAATGTGGAGGCTGAGGTCTGGGACTGGCTACAAGAGGACAGGGTGTCGATGTTCAGGGGTGACTGTGGAGGAGTGCTGCATTCAGAATGTGACACTGAACCTGC--AGAG------AGGAGT-GGGTAAT---GCCGGTGTGAACTCCCATCTCACTTCCCCAACAGCCAAGACCAAGAGGCAGATGCGATCCAGACACACAGCTCTA--TCCCCACTGCATCACATAGTCTGGAGCTCAGATGCT-AGGCTCTGCGTTGCC-CCCTACC--------CCCCACATCACCAGGCCTACTGCTGGGCTCAGTGAATTTTTACTGACTGACTGAGATGACCATGAAGTTCTCAGCTAAGCCCAGAGACTCCACCATGTGGGATCCTCTAGAGTCGACCTGCAGGC---------AGAGATGGGAGTGTCAAGAAGTCCTTACCTCTGTCGGAGCCCACGACATTCCGCGGATATCTTGGTGTTGATGGGATTTTAATGCGTTCCGCCTTGAACTGCAAGTTAGTCGAAGAACCTATTGTTCCACAAGGGAACGAAACTTCAGGCCTCATGGTTAAA-CACCACCCT--GTCCTCCCTCTCCACCAGGCTACCAGTTAGG------------ATGATAAATGCAAAGCTGCGCCCTGCTGTTTATTCCCGAGGGAGCCTTGATGTGGAACACTCAAGAAAAGCAAACGTTTAACAT----TTATCTCAATAAACTGTGCAGGCCCAGACTGCTCCAGAACAGGAGCGCACAAGTCTCACTTGCAGCCATGGAACAGCAGCCTAAGAGACACGGCGGCTGCTCCATCTTTTCTCCCCAGCGCCAGAG-----TTCCCCAAGATCTCC-- i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73829838 1304 - 130959383 acagaaaGCTT---------CGAGTGAGAGGG----------------AAAAGCAAAGGGTAAGAATgagtcccggt--------------gccagccgctaacca---cgtgg---ccacaggtctgtcactccaacg-tctggatccagtttcctcaactgtgaaacagg---gataacaataataacgacactgaca-----------aggtccctggaagaatctcgtgacttagccacatgtaaagtg--cttgaacaagggcccaggacggtg-taaacgG-------TGCCATGATGGCACAATCACCGTCAGGTCGTTTCCAGCATCAT---------CTACTGT-------------------------------------------GAGCCCACTGGGCTCCCTGCCTTGCCATCCACACGTGCCCCACCTCCCTGCATCCAGTGCCCTATGGCACTTACTGGTG---------------ATACCGGCAAATGCTGGGACA-CCCAAGC-------------------------------------------TACTCCTGCTGCTTCTAC--T----AAGCCCCTTCCCTGCA--GAGCCCGGGCCCGCCGCCAGGGTGCACACT--GTC--CACTGGTTTACCCACGCCACCGATGAC--ACCACACTCACCTGTCCTTTCTCCGCTCCCCGAGGGAGGCGGGGTTGACAGCGATTCTGGGCAATGTGGAGGCTGAGGTCTGGGACTGGCTACAAGAGGACAGGGTGTCGATGTTCAGGGGTGACTGCGGAGGAGTGCTGCATTCAGAATGTGACACTGAACCTGC--AGAG------AGGAGC-AGGTAAT---GCCGTTGTGAACCCCCATCTCACTTCCCCAACAGCCAAGATCAAGAGGCAG--------------------CCTA--TCCCCACTGCATTGCATAGTCTGGAGTTC-GATGCT-GGGCTCTGCGTTGCC-CCCTACC--------TCCCACATCACCAGGCCTACTGCTGGGTTCAGTGAATTTTTACTGACTGACTGAGATGACTATGAAGTTCTCAGCTAAGCCCAGAGACTCCACCATGAG----------GAATCAGACTGCAGGAAAAGCAGG-ACAGATGGGAGTGTCCAGAAGTCCTTACCTCTGTCAGAGCCCACGACAGACCGCGGATATCTTGGTGTTGATGGGATTTTAATGCGTTCCGCCTTGAATTGCAAGTTACTCGAAGAACCTATTGTTCCATATGGGAACAAAACTTCAGGCCTTGTGGTTAAA-CACCACCCT--GTCCTCCCTCTCCACCAGGCTACCAGTCAGG------------ATGATAAACGCAAAGCTGGGCCCTGCTGTTTACTCCCAAGGGAGCCTTGATGTGGAACAGTCAGGAAAAGCAGACGTTTAACAT----TTATCTCAATAAACTGTGCAGGCACAGACTGCTCCAGAACAGAGGCACACAAGTCTCACTTCCAGCCACGGAACAGCAGCCTAAGTGACACAGCGGCGGCTCCATCTGCTC----------------------CCGCAAGATCGCC-- i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75391126 1304 - 133195287 acagaaaGCTT---------CGAGTGAGAGGG----------------AAAAGCAATGGGTAAGAATgagtcccggt--------------gccagccgctaacca---cgtgg---ccacaggtctgtcactccaacg-tctggatccagtttcctcaactgtgaaacagg---gataacaataataacgacactgaca-----------aggtccctggaagaatctcgtgacttagccacatgtaaagtg--cttcaacaagggcccaggacggtg-taaacgG-------TGCCATGATGGCACAATCACCGTCAGGTCGTTTCCAGCATCAT---------CTACTGT-------------------------------------------GAGCCCACTGGGCTCCCTGCCTTGCCATCCACACGTGCCCCACCTCCCTGCATCCAGTGTCCTATGGCACTTACTGGTG---------------ATACCGGCAAATGCTGGGACA-CCCAAGC-------------------------------------------TACTCCTGCTGCTTCTAC--T----ATGCCCCTTCCCTGCA--GAGCCTGGGCCCGCCGCCAGGGTGCACACT--GTC--CACTGGTTTACCCACGCCACCGATGAC--ACCACACTCACCTGTCCTTTCTCCGCTCCCCGAGGGAGGCGGGGTTGACAGCGATTCTGGGCAATGTGGAGGCTGAGGTCTGGGACTGGCTACAAGAGGACAGGGTGTCGATGTTCAGGGGTGACTGCGGAGGAGTGCTGCATTCAGAATGTGACACTGAACCTGC--AGAG------AGGAGC-AGGTAAT---GCCGTTGTGAACCCCCATCTCACTTCCCCAACAGCCAAGATCAAGAGGCAG--------------------CCTA--TCCCCACTGCATTGCATAGTCTGGAGTTC-GATGCT-GGGCTCTGCGTTGCC-CCCTACC--------TCCCACATCACCAGGCCTACTGCTGGGTTCAGTGAATTTTTACTGACTGACTGAGATGACTATGAAGTTCTCAGCTAAGCCCAGAGACTCCACCATGAG----------GAATCAGACTGCAGGAAAAGCAGG-ACAGAGGGGAGTGTCCAGAAGTCCTTACCTCTGTCAGAGCCCACGACAGACCGCGGATATCTTGGTGTTGATGGGATTTTAATGCGTTCCGCCTTGAATTGCAAGTTACTCGAAGAACCTATTGTTCCATATGGGAACAAAACTTCAGGCCTTGTGGTTAAA-CACCACCCT--GTCCTCCCTCTCCACCAGGCTACCAGTCAGG------------ATGATAAACATAAAGCTGGGCCCTGCTGTTTACTCCCAAGGGAGCCTTGATGTGGAACAGTCAGGAAAAGCAGACGTTTAACAT----TTATCTCAACAAACTGTGCAGGCACAGACTGCTCCAGAACAGAGGCACACAAGTCTCACTTCCAGCCACGGAACAGCAGCCTAAGTGACACAGCGGCGGCTCCATCTGCTC----------------------CCGCAAGATCGCC-- i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73255870 1308 - 125196307 acagAAAGCTT---------CGAGTGAGAGGG----------------AAAAGCAAAGGGTAAGAATGAGTCCCGGT--------------GCCAGCCGCTAACCA---CGTGG---CCACAGGTCTGTCACTCCAACG-TCTGGatccagtttcctcaactgtgaaACAGG---GATAACAATAATAACGACACTGACA-----------AGGTCCCTGGAAGAATCTCGTGACTTAGCCACATGTAAAGTG--CTTGAACAAGGGCCCAGGACGGTG-TAAACGG-------TGCCATGATGGCACAATCACCGTCAGGTCGTTTCCAGCATCAT---------CTACTGT-------------------------------------------GAGCCCACTGGGCTCCCTGCCTTGCCATCCACACGTGCCCCACCTCCCTGCATCCAGTGCCCTATGGCACTTACTGGTG---------------ATACCGGCAAATGCTGGGACA-CCCAAGC-------------------------------------------TACTCCTGCTGCTTCTAC--T----AAGCCCCTTCCCTGCA--GAGCCCGGGCCCGCTGCCAGGGTGCACACT--GTCCACACTGGTTTACCCACGCCACCGATGACTGGCCACACTCACCTGTCCTTTCTCCGCTCCCCGAGGGAGGCGGGGTTGACAGCGATTCTGGGCAatgtggaggctgaggcctggGACTGGCTACAAGAGGACAGGGTGTCGATGTTCAGGGGTGACTGCGGAGGAGTGCTGCATTCAGAATGTGACACTGAACCTGC--AGAA------AGGAGC-AGGTAAT---GCCGTTGTGAACCCCCATCTCACTTCCCCAACAGCCAAGATCAAGAGGCAG--------------------CCTA--TCCCCACTGCATTGCATAGTCTGGAGTTC-GATGCT-GGGCTCTGCGTTGCC-CCCTACC--------TCCCACATCACCAGGCCTACTGCTGGGTTCAGTGAATTTTTACTGACTGACTGAGATGACTATGAAGTTCTCAGCTAAGCCCAGAGACTCCACCATGAG----------GAATCAGACGGCAGGAAAAGCAGG-ACAGATGGGAGTGTCCAGAAGTCCTTACCTCTGTCAGAGCCCACGACAGACCGCGGATATCTTGGTGTTGATGGGATTTTAATGCGTTCCGCCTTGAATTGCAAGTTACTCGAAGAACCTATTGTTCCATATGGGAACAAAACTTCAGGCCTTGTGGTTAAA-CACCACCCT--GTCCTCCCTCTCCACCAGGCTACCAGTCAGG------------ATGATAAACGCAAAGCTGGGCCCTGCTGTTTACTCCCAAGGGAGCCTTGATGTGGAACAGTCAGGAAAAGCAGACGTTTAACAT----TTATCTCAATAAACTGTGCAGGCACAGACTGCTCCAGAATAGACGCACACAAGTCTCACTTCCAGCCACGGAACAGCAGCCTAAGTGACACAGCGGCGGCTCCATCTGCTC----------------------CCCCAAGATCGCC-- i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72087852 1306 - 125710982 acagaaaGCTT---------CGAGTGAGAGGG----------------AAAAGCAAAGGGTAAGAATgagtcccggt--------------gccagccgctaacca---cgtgg---ccacaggtctgtcactccaacg-tctggatccagtttcctcaactgtgaaacagg---gataacaataataacgacactgaca-----------aggtccctggaagaatctcgtgacttagccacatgtaaagtg--cttgaacaagggcccaggacggtg-taaacgG-------TGCCATGATGGCACAATCACCGTCAGGTCGTTTCCAGCATCAT---------CTACTGT-------------------------------------------GAGCCCACTTGGCTCCCTGCCTTGCCATCCACACGTGCCCCACCTCCCTGCATCCAGTGCCCCATGGCACTTACTGGTG---------------ATACCGGCAAATGCTGGGACA-CCCAAGC-------------------------------------------TACTCCTGCTGCTTCTAC--T----AAGCCCCTTCCCTGCA--GAGCCCGGGCCCGCCGCCAGGGTGCACACT--GTC--CACTGGTTTACCCACGCCACCGATGACTGGCCACACTCACCTGTCCTTTCTCCGCTCCCCGAGGGAGGCGGGGTTGACAGCGATTCTGGGCAATGTGGAGGCTGAGGTCTGGGACTGGCTACAAGAGGACAGGGTGTCGATGTTCAGGGGTGACTGCGGAGGAGTGCTGCATTCAGAATGTGACACTGAACCTGC--AGAG------AGGAGC-AGGTAAT---GCCACTGTGAACCCCCATCTCACTTCCCCAACAGCCAAGATCAAGAGGCAG--------------------CCTA--TCCCCACTGCATTGCATAGTCTGGAGTTC-GATGCT-GGGCTCTGCGTTGCC-CCCTACC--------TCCCACATCACCAGGCCTACTGCTGGGTTCAGTGAATTTTTACTGACTGACTGAGATGACTATGAAGTTCTCAGCTAAGTCCAGAGACTCCACCATGAG----------GAATCAGACTGCAGGAAAAGCAGG-ACAGATGGGAGTGTCCAGAAGTCCTTACCTCTGTCAGAGCCCACGACAGACCGCGGATATCTTGGTGTTGATGGGATTTTAATGCGTTCCGCCTTGAATTGCAAGTTACTCGAAGAACCTATTGTTCCATATGGGAACAAAACTTCAGACCTTGTGGTTAAA-CACCACCCT--GTCCTCCCTCCCCACCAGGCTACCAGTCAGG------------ATGATAAACGCAAAGCTGGGCCCTGCTGTTTACTCCCAAGGGAGCCTTGATGTGGAACAGTCAGGAAAAGCAGACGTTTAACAT----TTATCTCAATAAACTGTGCAGGCACAGACTGCTCCAGAACAGAGGCACACAAGTCTCACTTCCAGCCACGGAACAGCAGCCTAAGTGACACGGCGGCGGCTCCATCTGCTC----------------------CCCCAAGATCGCC-- i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75545008 1337 - 121768101 ACAAAAAACTT---------CAAGTGAGAGGG----------------AAAACCACAGGGTAAGAATAAGTCCAGGt--------------gccagtggctaaccaggctgcgg---ccataggcccgtcactccaacg-tctgaacccagtttcctcaactgtgaagtggg---g------gtaataacaacactcaca-----------gggtccctggaaggatctcgtgacttagtcacatgtaaagtg--cttgaacaAGGGCCCAGGAAGGTG-TACGTGG-------TGTCACGATGACATGATCACCGTCAGGTGGTTACCAGCACCAT---------TTACTAT-------------------------------------------AAGCGAACCCCACTCCCTGACTTGCTACTCACACATGCCTCACGTCCCTGTATCCAGTGTCCCATGGCACCTGTTGGTG---------------ACACCAGTGAATGCTGGGATA-CCCAAGC-------------------------------------------TGCTCCTGCTGCTTCTAC--T----AAGCCCCTTCCCTGCA--GAGCCTGGGCCCGCCACTGGGATG--CACT--GTC--CACCGGTTTACCCACGCCACTGATGCCCAGCCATGCTCACCTGTCTTTTCTCCGCTCCCCGAGGGATGCAGGGTTGACAGCGATTCTGGGCAATGTGGAGGCTGAGGTCTGGGACTGGCTACAAGAGGACAGGGTGTCGATGTTCAGGGGTGACTGCGGAGGAGTGCTGCATTCAGAATGTGACAGTGAACCTGC--AGAG------AGAAGC-GTGTAAT---GCTGGCGTGAACTCCCATCTCCCTTCCCC-ACAGCCAAGACAGAAAGGCAGATGTGATCCAAACACAAAGCTCTA--TCCCCACTGCATTACATGGCCTGGAGCTCAGGTGCT-GGGCTCTGCGTTGCC-CCCATCC--------CCCCACATCGCCAGGCCCACTGCTGGGCTCAACCAACTTTTACTGATTGACTGAGACAATTATGAAGTTCTCAGCTAAGCCCAGAGACTCCACCGTGAG----------GAGTCAGACCACAGGAAAAGCAGG-AGAGATGGGA-TGCCGAGAAGTCCTTACCTCTATCGGAGCCCACAACAGACCGCGGGTATCTTGGGGTTGATGGGATTTTAATGCGTTCCGCCTTGAACTGCAAGTTACTCGAAGAACCTATTGTTCCGCAAGGCAACAAAACTTCAGGCCTCGACATTAAC-CACCACCCT--GTCCTCCCTCTCCACCAGGCTACCACTCAGG------------ATGACAAACGCAAAGCTGGGCCCTGCTA-TTATTCTCGAGGGAGCCCTGATGAGGAACAGTCAAGAAAAGCAGACGCTTAACAT----TTACCTCAATAAACTGTGCAGGCCCAGACTGCTCCAGAACAGGAGCACACAAGTCTCACTTCCAGCCATGGAAGAGCAACCTAAGTGACACAGCAGCTGCTCCATCTTTTCTCCCCAGCACCAGAG----CTCCCCTAAGACCTCC-- i calJac3.chr12 C 0 C 0 s mm10.chr14 24153801 1144 + 124902244 ACAGCAAACTA---------TACGTGGGGGCC---------------AAAGACCAAGAGATAAGAATGAGCCCCGTTC------AGTGCA-GTCAGTTTGCATCCA---CACAGCTCCTGCAGGT------------GG-TCTGCATCCAG--CCCACTGCTGTGAAACAGA---CTTAATTGTA----------------------------------GGACCACTCATGCAACTGAG--ACTCTTAGAGTGGCGTTGTAAACGGGCCTGGCAAGCAGCTAAGCAGCAAGCCCTTCCACATTG---CTGTCACCACCAGACCATCTCCAGCATCTTGCTTAGTCACTGCTTTGG------------------------------------GGGAAGAGCCCACCTTGCTCTGTTCCT-GCCATCTAC-------------------------------ATCGGACCTGCT-GTG---------------TCTCCAGCA-------------------------------------------------------------------CCCACTGTTTCTACAGT----AGGCCTCAGACACTCT--GGACT--ACCCCATCACCAGAGCAGAAATGGAGTG--CCCGGGGATACCCCAGACACAGATGTCC-ATTACACTCACCTGTCCTTCCTCCGCTCCCCATGGGAAGAGGGGTTGACCGCAATCCTGGGTAAAGTGGAGGCTGTGGTCTGAGGCTGGCTACAGGAGGACAGGGTGTCGATATTCAGCGGGGACCGGGGAggagtgctacattcagaatgtgacagtgagcctgccaagaG------AGAAGG-GGTGCAC---GTGACTG---ACTGCCATCT-----------------------AGACACAA--------------------GCTG--TGTGGGTTTCATCCTAT-GACCGGGGCCCTGATGAA-GGTCTCCACATTGCC-TACTGTC---------CCCACAGCAACAGG-TGAGGGCTAGGCTCAGTCATCTTTCAGCAGCCCACAGAGATGACTA-----------------------------------------------GAAGGGGACC-CAGGGGCAGCAGGCACAGGAGGGAACGCCC---AGTTCTTACCTCTGTCAGAGCCCATGACAGACCGGGGATATCTTGGTGTTAGCGGGATCTTAATCCGCTCAGCCTTGAACTGCAGGTTACTGGAAGAGCCTGTTGTTCCAGGAGGAGACACGGTGTCAAGCCTCGGGACTAAACCACAGCCCT-AGATCCTCACCTCCACTCAGC-AGTAGGCACA------------ATGAGTGACACACAG--GGG--CTGTTGAATATCCCTGAGGGA------------AATAATCAATGGAGG--------------------ACTACAGAGAA----GCAGATCCGGAATGTTCCAGAACAGGAGCACATG---------CCCCAAAATGCAACAGTCGCCTAGCTGCTGCAGCAGATGTTCCATCTTCTC---------TCTGAA-----TCCCTAAAGACCTCT-- i mm10.chr14 I 1754 T 42166 s canFam3.chr4 27708527 1511 + 88276631 ATAAACAGCTTGGGAGGGGACAAGTGGTACAGGTGTGTTCTGGAGCCagaaagcaaagaataagaatgagccctgattctaaggaaggcagcccagtccccaggca---tgtga---cc-tagaccagttactccaactctctggcctcagtttccttatctgtaaaagataactgatgacaatgatgatgatgatgacgatgatgctcatgggtcgctgtgaggatttcacaactt-ttcacatggaaagtg--cttaatccagggccagggaaacag-CGCATGG-------TGCCACCA---CATCTTCACCACCAGGTGGTCCCCAGCGTCAC---------TTGCTGCAGCTCAGCCCTCCCGTGGACCTCCCATGGACCTTCTGCAGCAGGAGCCCAGCCTGCTCCTCACCTCGCCGTCTATGGGCACCCCACCTCCTGGCACC--ATCACCTGCAGGGGGTCCTGGTGAAAGGCTGGGGCAGCACGCCAGAGAATGCCAAGTGACCCCAAGCAGAGCGGTCTCACCCTGGCATTGACTCATTTGGAATCCTCCCACGCGCCTGCTTCTTCTAC--CAGCAAGGCCCCTTCCCTCCACCAAGCCCCGGCCTACTGTAGGGATG--TGTC--GCC--CACTGCCGTGCCCATGGTACAGATGCCTAGGCGTGCTCACCTGTCCTTCCTCCGTTCCCCGAGGGCCGCAGGGTTGACGGCAATTCTGGGCAACGTGGAGGCTGAGGTCTGGGACTGGCTACAGGAGGACAGGGTGTCGATGTTTAGGGGTGACTGTGGAGGCGTGCTGCATTCCGAATGCGACAACGAACCTGC--AAAGGTTCAAAGGTGCAAAGCAACTTGGGCTTTGCGATCTCACATCTCCGTTCCCTTGTGGCCCAGGCCAAGATGGAGATGCGATCCAGGCACGTGGCTCCACGCCTCGGCCACACCGTATGGCCTCGAATTCAGATGCCGGGGCTCCATGCAGCCTTTCTACCTAGTCTAGCCCCACGTCACCAGGCCTGAGCCTGGGCTCACCCAGCACGCACAGCCTGACTGAGATGAGGAAGAGGTTACGCGCTGAGCCCAGACGCTGAACGACGAGGCCA------GAGCAAGCCAGCAGGC---------GAGGACGGGGGTGT----GAGTTCTCACCTCTATCAGAGCCCACAATGGACCGAGGGTATCTTGGCGTTGACGGGATTTTAATGCGTTCCGCCTTGAACTGCAAGTTGCTTGAAGACCCTATGGTGCCATGAGGGGACAAAACTTCAGGCCTGGTA--TAAA-CACCACCCTCAGTCCT---TCACCACGTCAGTGCCTCTTAGGGAAGAGGCAGTCACAACAAGTGCAAAGC-AGGCCCTGCCACTTCTCCCCAAGGGGGCCTATGTGTGAAATGGTCAAGAAAAGCAGATGCTCAACACCCGGTTATCTGAGTGAACCGTGCAGGCCTGGA------CAGAACAGGGTCACACAAATCTCAC-CCTAGCC------------CCCAAGTGACAGAGGGGACTGCCCGCCTCCACCCCAAGTGGCTGGAAGCGGCGCCACCTGAGTCTCTTT i canFam3.chr4 C 0 C 0 a score=637069.000000 s hg38.chr10_KI270825v1_alt 56097 201 + 188315 -ATGGG-----CTACC--TTTGTCCGACTCT-CCTCTGGGGTTCACTTTCCATACAAAAATGTATGAAGAGCCATACAAAACAGTCCAGAATGAGGCCAACAACCTCAGGGACACAGAGCAAGGCTCCT-AGCTGAGGGGTCACCT-GAATGACCATAAGGCCCCCACAGAA------AGCGGA---------AGGCGAAAGCAATGGCTCTGACAGCAGCATGGGC s panTro4.chr10 76426797 201 + 133524379 -ATGGG-----CTACC--TTTGTCCGACTGT-CCTCTGGGGTTCACTTTCCATACAAAAATGTATGAAGAGCCATACAAAACAGTCCAGAATGAGGCCAACAACCTCAGGGACACAGAGCAAGGCTCCT-AGCTGAGGGGTCACCT-GAATGACCATAAGGCCCCCACAGAA------AGCGGA---------AGGCGAAAGCAATGGCTCTGACAGCAGCATGGGC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76096538 201 - 133410057 -ATGGG-----CTACC--TCTGTCCGACTCT-CCTCTGGGGTTCACTTTCCATACAAAAATGTATGAAGAGCCATACAAAACAGTCCAGAATGAGGCCAACAACCTCAGGGACACAGAGCAAGACTCCT-AGCTGAGGGGTCACCT-GAATGACCATAAGGGCCCCGCAGAA------AGCGGA---------AGGCGAAAGCAATGGCTCTGACAGCAGCATGGGC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35037891 201 + 104879549 -ATGGG-----CTACC--TCTGTCTGACTCT-CCTCTGGGGTTCACTTTCCATACAAAAATGTATGAAGAGCCATCCAAAACAGTCCAGAATGAGGCCAACAACCTCAGGGACACAGAGCAAGGCTCCT-AGCTGAGGGGTCACCT-GAATGACCATAAGGCCCCCGCAGAA------AGCGGA---------AGGCGAAAGCAATGGCTCTGACAGCAGCATGGGC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73831142 201 - 130959383 -AAGGG-----CTACC--TCTGTCTGACTCT-CCTCTGGGGTTCACTTTCCATACAAAAATGTATGAAGAGCCATATAAAACAGTCCAGAATGAGGCCAACAACCTCAGGGACAGGGAGCAAGGCTCCT-AGCTGAGCGATCACCT-GAATGACCATAAGGGCCCCACAGAA------AGCAGA---------AGGCGAAAACAATGGCTCTGACAGCAGCATGGGC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75392430 201 - 133195287 -AAGGG-----CTACC--TCTGTCTGACTCT-CCTCTGGGGTTCACTTTCCATACAAAAATGTATGAAGAGCCATATAAAACAGTCCAGAATGAGGCCAACAACCTCAGGGACAGGGAGCAAGGCTCCT-AGCTGAGCGATCACCT-GAATGACCATAAGGGCCCCACAGAA------AGCAGA---------AGGCGAAAACAATGGCTCTGACAGCAGCATGGGC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73257178 201 - 125196307 -AAGGG-----CTACC--TCTGTCTGACTCT-CCTCTGGGGTTCACTTTCCATACAAAAATGTATGAAGAGCCATATAAAACAGTCCAGAATGAGGCCAACAACCTCAGGGACAGGGAGCAAGGCTCCT-AGCTGAGCGAGCACCT-GAATGACCATAAGGGCCCCACAGAA------AGCAAA---------AGGCGAAAACAATGGCTCTGACAGCAGCATGGGC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72089158 201 - 125710982 -AAGGG-----CTACC--TCTGTCTGACTCT-CCTCTGGGGTTCACTTTCCATACAAAAATGTATGAAGAGCCATATAAAACAGTCCAGAATGAGGCCAACAACCTCAGGGACAGGGAGCAAGGCTCCT-AGCTGAGCAGTCACCT-GAATGACCATAAGGGCCCCACAGAA------AGCAGA---------AGGCAAAAACAATGGCTCTGACAGCAGCATGGGC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75546345 198 - 121768101 -ATGGG-----CTACC----TGTCCACCTCT-ACTCTGGGGTTTACTTTCCATACAAAAATGTATAAACAGCCATACAAAATAG-CCAGAATGAGACTGACAACCTCAGGCACAGGGAGCAAGGCTCCT-AGCTGAGGGGTCACCT-GAATGACCACACAGCCCCTGCAGAA------AGCGGA---------AGGCAAAAGCAATGGCTCTGACAGCAGCACACGC i calJac3.chr12 C 0 C 0 s mm10.chr14 24112779 198 + 124902244 -ACGGGTCTTACTACCAGGCAACATGAATGT-TTTCATGGATATACTTTCT--------TGGAATAAGCAGCCA---GTGACCAACCAGAATGA--CTGAAAATCTCAGGGACAGGGAGAAAGAGT-AT-GTCCAAGGGGTCATTTAGAATAATTACACAGCTACCACAAAGGCTTCCAGTTAA---------AGG---AGGCAGTAGCTTTAAGCACAGTTTAGAT i mm10.chr14 T 42166 I 42049 s canFam3.chr4 27710038 192 + 88276631 ATCAGG-----CAACT--GCTA---GTCTCTGCCTCTGGGCTGCATTCCTCAC----AAGTGAACAGAAACCC------------CCAGAATCA--CTGACAGGCTCAGAGACAGGGAGTGAGGCTTGTGGGCCAAGGAGTTCCCTGGAACAGCCGTATGCCTGCCGGGAAA------GCCTAAGAGACACAGAGGCCGAAGGAGACGCTCTCTGGGCAGCATGGG- i canFam3.chr4 C 0 C 0 a score=4269234.000000 s hg38.chr10_KI270825v1_alt 56298 1302 + 188315 ATGGCTGGCCCATGAAGGAAGCAGCCCTTCCCAGTAGAGAAATGAGCTCAGTCCCAGGAGGTGACAGGAGCTCGTGTGGGGAGCCCACCCGCAGATCTGGACATTAGGATGCAGGCAGAGATGAAAA----GCTTGGCACCCTCTGCAGC-ACAAAGTCCAAGTGGTGCAGTTACCCAGGCGGGCGCTGGAGGGCAGTGAGTTGGACCCATGGGTGGCTCTCATCTCGGAGTAGTCGCTGCAGGTCCTGTGGCTCAGGTCCAGGCTCAGGCGTCCCTGGTGCTGGACACTGC--GTAAAAAC--AAGAGGTGAGGAGTTCGGGAGGAGAACCAGGAACAGATGTGGCCA---------CTGGGGAGAAACACACAGACCAGGCAAGGGTTCCCAAGCGGGCAGAAGGGAGGCC-CAGGAGCCACTGATTATCAGCCGAGGATAGCAGGCTGCCCTCAGCCAC-TCCCGGAGGTGGCATCCACTAAGAG-CCTTCAGGAAGTAGAAAGGGCCACACACATGGGGCGGTCAGTATCATACCCACTCCAGCCATAGGGTCAGGATTAGGCTCACTAGGAAGAAGTGAT------------------AAAAAACAGAGGTTTTGCAACCTGGGTGGGCCTGGGGAGGGGGAACCTGTCCTCCCAGGAAGTGGGTAAGGAGAGACAA----GGCAC-AGAGGACTTTGGGGAGGGGACCTATGTGCCTCACTCGGGACAGCGTGCCTAAGAAAATGAAG--GGCAGAG------CAGGGATCGCCCACATCAGGCTGCCCTGAGACCAGGCCTCAACAGCatctttttccagctatgtaatgaggtgacatctcttccct-gcttaaactctacagtggtctccactgtccttagaataaaatccaaactcttcatcaccgctgcaggtcccacagggtttgtgccctgtgacctcaa----------------------------------------------------------------------acctcttctTGACTCGCTGCCCCTTTGACAAGCTCCCA---------------------CGACTGTGCCTG--GGTGCCCTggccttggcaccgatg----gcccttctc-cctggaggc--tccagcccaggtcttgtgca-------------------gctggcctctttca------------------------tccttctggtcacagcagca---------tcccctctgccacagggcccttcctgaccacccactctaacttgccaccctcttccaagttacagcccagcctgtcaccctgtttgactgccttcatagcctcttggcaccatctgatatcacttcgttcattt-tttttttttgtctgcctcccacatttgaa-aaaccacacgacatgagctagaagctaatttgtttag--ttcagcaatgtat---cctcttataattaggatagaccaaggcatgtagtaggtgctca s panTro4.chr10 76426998 1299 + 133524379 ATGGCTGGCCCATGAAGGAAGCAGCCCTTCCCAGTAGAGAAATGAGCTCAGTCCCAGGAGGTGACAGGAGCTCGTGTGGGGAGCCCACCCGCAGATCTGGACATTAGGATGCAGGCAGAGATGAAAA----GCTTGGCACCCTCTGCAGC-ACAAAGTCCAAGTGGTGCAGTTACCCAGGCGGGCGCTGGAGGGCAGTGAGTTGGACCCATGGGTGGCTCTCATCTCGGAGTAGTCGCTGCAGGTCCTGTGGCTCAGGTCCAGGCTCAGGCGTCCCTGGTGCTGGACACTGC--GTAAAAAC--AAGAGGTGAGGAGTTCGGGAGGAGAACCAGGAACAGATGTGGCCA---------CTGGGGAGAAACACACAGACCAGGCAAGGGTTCCCAAGCGGGCAGAAGGGAGGCC-CAGGAGCCACTGATTATCAGCCGAGGATAGCAGGCTGCCCTCAGCCAC-TCCCGGAGGTGGCATCCACTAAGAG-CCTTCAAGCAGTAGAAAGGGCCACACACATGGGGCGGTCAGTATCATACCCACTCCAGCCATAGGGTCAGGATTAGGCTCACTAGGAAGAAGTGAT------------------AAAAAACAGAGGTTTTGCAACCTGGGTGGGCCTGGGGAGGGGGAACCTGTCCTCCCAGGAAGTGGGTAAGGAGAGACAA----GGCAC-AGAGGACTTTGGGGAGGGGACCTATGTGCCTCACTCGGGACAGCGTGCCTAAGAAACTGAAG--GGCAGAG------CAGGGATCGCCCACATCAGGCTGCCCTGAGACCAGGCCTCAACAGCatctttttccagctatgtaatgaggtgacatctcttccct-gcttaaactctatggtggtctccactgtccttagaataaaatccaaactcttcatcacggctgcaggtcccacagggtttgtgccctgtgacctcaa----------------------------------------------------------------------acctcttctTGACTCGCTGCCCCTTTGCCAAGCTCCCA---------------------CGACTGTGCCTG--GGTGCCCTggccttggcaccgatg----gcccttctc-cctggaggc--tccagcccaggtcttgtgca-------------------gctggcctctttca------------------------tccttctggtcacagcagca---------tcccctctgccacagggcccttcctgaccacccactctaacttgccaccctcttccaagttacagcccagcctgtcaccctgtttgactgccttcatagcctcttggcaccatctgatatcactttgttca----tttttttttgtctgcctcccacatttgaa-aaaccacaccacatgagctagaagctaatttgtttag--ttcagcattgtat---cctcttataattaggatagaccaaggcatgtagtaggtgctca i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76096739 1303 - 133410057 ACGGCTGGCCCATGAAGGAAGCAGCCCTTCCCAGTAGAGAAATGAGCTCAGTCCCAGGAGGTGACAGGAGCTCGTATGGGGAGCCCACCCGCAGATCTGGACATTAGGATGCAGGCAGAGATGAAAA----GCTTGGCACCCTCTGCAGC-ACAAAGTCCAAGTGGTGCAGTTACCGAGGCGGGCGCTGGAGGGCAGTGAGTTGGACCCATGGGTGGCTCTCATCTCAGAGTAGTCACTGCAGGTCCTGTGGCTTAGGTCCAGGCTCAGGCGTCCCTGGTGCTGGACACTGC--ATAAAAAC--AAGAGGTAAGGAGTTCGGGAGGAGAACCAGGAACAGATGTGGCCA---------CTGGGGAGAAACACACAGACCAGCCAAGGCTTCCCAAGCGGGCAGAAGGGAGGCC-CAGGAGCCACTGATTATCAGCCGAGGATAGCAGGCTGCCCTCAGCCAC-TCCCAGAGGTGGCATCCACCAAGGG-CCTTCAAGCAGTAGAAAAGGCCACACAC--GGGGCGGCCAGTATCATACCCACTCCAGCCATAGGGTCAGGATTAGGCTCACTAGGAGGAAGTGAT-----------------AAAAAAACAGAGGCTTTGCAACCTGGGTGGGCCCGGGGAGGGGGAACCTGTCCTCCCAGGAAGTGGGTAAGGAGAGACAAGATGGGCAC-AGAGGACTTTGGGGAGGGGACCTATGTGCCTCACTCGGGACAGCGTGCCTAAGAAACTGGAG--GGCAGAG------CAGGGATCGCCCACATCAGGCTGCCCTGAGGCCAGGCCTCAACAGCatctttttccagctatgtaatgaggtgacatctcttccct-gcttgaactctacagtggtctccactgtccttagaataaaatccaaactcttcatcacggctgcaggtcccacagggtttgtgccctgtgacctcaa----------------------------------------------------------------------acctcttcttgactcgctgcccctttgccaagctccca---------------------ccacTGTGCCTG--GGTGCCCTggccttggcaccgatg----gcccttctc-cctggaggc--tccagcccaggtcttgtgca-------------------gctggcctctttca------------------------tccttctggtcacagcagca---------tcccctctgccacagggcccttcctgaccacccactctaacttgccaccctcttccaagtcacagcccagcctgtcaccctgtttgactgccttcatagcctctcggcaccatctgatatcacttcgttca--t-tttttttctgtctgcctcccacatttgaa-aaaccacaccacatgagctagaagctaatttgtttag--ttcagcattgtat---cctcttataatcaggatagaccaaggcatgtagtaggtgctca i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35038092 1373 + 104879549 ATGGCTGGCCCATGAAGGAAGCAGCCCTTCTCAGTAGAGAAATGAGCTCAGTCCCAGGAAGTGACAGGAGCTCGTGTGGGGAGCCCACCCGCAGATCTGGACATTAGGATGCAGGCAGAGATGAAAA----GCTTGGCACCCTCTGCAGC-ACAAAGTCTGAGTGGTGCAGTTACCGAGGCGGGCGCTGGAGGGCAGTGAGTTGGACCCATGGGTGGCTCTCATCTCGGAGTAGTCGCTGCAGGTCCTGTGGCTCAGGTCCAGGCTCAGGCGTCCCTGGTGCTGGACACTGC--GTAAAAAC--AAGAGGTGAGGAGTTCGGGAGGAGAACCAGGAACAGATGTGGCCA---------CTGGGGAGAAACACACAGACCAGCCAAGGCTTCCCAAGCGGGCAGAAGGGAGGCC-CAGGAGCCACTGATTATCAGCCGAGGATAGCAGGCTGCCCTCAGCCAC-TCCTGGAGGTGGCATCCACCAAGGG-CCTTCAAGCAGTAGAAAAGGCCACACACATGGGGCGGCCAGTATCATACCCACTCCAGCCATAGGGTCAGGATTAGGCTCACTAGGAGGAAGTGAT------------------AAAAAACAGAGGCTTTGCAACCTGGGTGGTCCCGGGGAGGGGGAACCTGTCCTCCCAGGAAGTGGGTAAGGAGAGACAAGATGGGCAC-AGAGGACTTTGGGGAGGGGACCTATGTGCCTCACTCGGGACAGCGTGCCTAAGAGACTGGA---GGCAGAG------CAGGGATCGCCCACATCAGGCTGCCCTGGGGCCAGGCCTCAACAGCATCTTTTTCCGGCTATGTaatgaggtgacatctcttccgt-gcttaaactctccattggtctccactgtccttagaataaaatccaaactctttatcacagctgcaggtcccacagggtttgtgccctgtgacctcaaacctcttcttgattcgctgcccctttcccaagctcccaccacTGTGCCTGGGTGCCCTGGCCTTGGCACCACCTCTTCTTGATTCGCTGCCCCTTTCCCAAGCTCCCA---------------------CCACTGTGCCTG--GGTGCCCTggccttggcaccgatg----gcccttctc-cctggaggc--tccagcccaggtcttgtgca-------------------gctggcctctttca------------------------tccttctggtcacagcagca---------tcccctctgccgcagggcccttcctgaccacccactctaacttgccaccctcttccaagtcacagcccagcctgtcaccctgtttgactgccttcatagcctctcagcaccatctgatatcacttcgttca--t-tttttttctgtctgcctcccacatttgaa-aaaccacaccacatgagctagaagctaatttgtttag--ttcagcattgtat---cctcttataattaggatagaccaaggcatgtagtaggtgctca i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73831343 1246 - 130959383 ATCGCTGGCCCGTGAAGGAAGCAGCCCTTCCCAGTAGGGAAATGAGCTCAGTCCCAGGAGGTGACAGGAGCTCGTGTGGGGAGCCCACCCACAGATCTGGACATTAGGATGCAGGCAGAGAAGAAAA----GCTTGGCACCCGCGGCAGC-ACAAAGTCCAAATGGTGCAGTTACCGAGGCGGGCGCTGGAGGGCAGTGAGTTGGACCCGTGGGTGGCTCTCATCTCAGAGTAGTCGCTGCAGGCCCTGTGGCTCAGGTCCAGGCTCAGGCGTCCCTGGTGCTGGACACTGC--GTAAAAAC--AAGAGGTGAGGAGTTCCGGAAGAGAAACAGAAACAGATGTGGCCA---------CTGGGAAGAAACACACAGACCAGCCAAGGCTTCCCAAGCAGGCAGAAGGGAGGCC-CAGGAGCCACTGATGATCGGCCAAGGATA--------------------------------------------G-CCTTCAAGCAGTAGAAAAGGCCACACACATGGGGTGGCCAGTGTCATACCCACTTCAGCCATGGGGTCAGGATTAGGCTCACTAGGAGGAAGTGAT------------------AAAAAACAGAGGCTCTGGAACCTGGGTGGGCCCGGGGAGGGGGAACCTATTCTCCCAGGAAGTGGGTAAGGAGGGACAAGATGGGCAC-AGAGGACTTTGGGGAGGGGACCTATGTGCCTCACTCAGGACAGTGTGCCTAGGAAACTGGAC--GGCAGAG------CAGGGATCGCCCACGTCAGGCTGCCCTGAGGCCAGGCCTCAACAGCATCTTTTTCTGGCTATGCaatgagatgacatctcttccct-gcttaaactctccagtggtctccactgtccttagaataaaatccaaactttttatcacggctgcaggt---------------ccctgtgacctcaa----------------------------------------------------------------------acctcttcctgactcgctgtccctttgccaagctccca---------------------ccactGTGCGCG--GGTACCCTggccttggcactgatg----gcccttctc-cctggaggc--tccagtccaggtcttgtgcg-------------------gctggcctctttcc------------------------tccttctggtcacagcagca---------tccccgctgccacagggccctttctgaccacccactctaacttgccaccctcttccaagtcacagcccagcctgtcaccctgtttgaccaccttcatagcctctcgtcaccatctgatatcacttcgttca--t-tttttttctgtctgcctcccacatttgta-aaaccacaccacatgagctggaagctaatctgtttag--ttcagcattgtat---tctcttataattaggatagaccaaggcatgcagtaggtgctca i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75392631 1246 - 133195287 ATCGCTGGCCCGTGAAGGAAGCAGCCCTTCCCAGTAGGGAAATGAGCTCAGTCCCAGGAGGTGACAGGAGCTCGTGTGGGGAGCCCACCCACAGATCTGGACATTAGGATGCAGGCAGAGAAGAAAA----GCTTGGCACCCGCGGCAGC-ACAAAGTCCAAATGGTGCAGTTACCGAGGCGGGCGCTGGAGGGCAGTGAGTTGGACCCGTGGGTGGCTCTCATCTCAGAGTAGTCGCTGCAGGCCCTGTGACTCAGGTCCAGGCTCAGGCGTCCCTGGTGCTGGACACTGC--GTAAAAAC--AAGAGGTGAGGAGTTCCGGAAGAGAAACAGAAACAGATGTGGCCA---------CTGGGAAGAAACACACAGACCAGCCAAGGCTTCCCAAGCAGGCAGAAGGGAGGCC-CAGGAGCCACTGATGATCGGCCAAGGATA--------------------------------------------G-CCTTCAAGCAGTAGAAAAGGCCACACACATGGGGTGGCCAGTGTCATACCCACTTCAGCCATGGGGTCAGGATTAGGCTCACTAGGAGGAAGCGAT------------------AAAAAACAGAGGCTCTGGAACCTGGGTGGGCCCGGGGAGGGGGAACCTATTCTCCCAGGAAGTGGGTAAGGAGGGACAAGATGGGCAC-AGAGGACTTTGGGGAGGGGACCTATGTGCCTCACTCAGGACAGTGTGCCTAGGAAACTGAAC--GGCAGAG------CAGGGATCGCCCACGTCAGGCTGCCCTGAGGCCAGGCCTCAACAGCATCTTTTTCTGGCTATGCaatgagatgacatctcttccct-gcttaaactctccagtggtctccactgtccttagaataaaatccaaactttttatcacggctgcaggt---------------ccctgtgacctcaa----------------------------------------------------------------------acctcttcctgactcgctgtccctttgccaagctccca---------------------ccactGTGCGCG--GGTACCCTggccttggcactgatg----gcccttctc-cctggaggc--tccagtccaggtcttgtgcg-------------------gctggcctctttcc------------------------tccttctggtcacagcagca---------tcccctctgccacagggccctttctgaccacccactctaacttgccaccctcttccaagtcacagcccagcctgtcaccctgtttgaccaccttcatagcctctcgtcaccatctgatatcacttcgttca--t-tttttttctgtctgcctcccacatttgta-aaaccacaccacatgagctggaagctaatctgtttag--ttcagcattgtat---tctcttataattaggatagaccaaggcatgcagtaggtgctca i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73257379 1246 - 125196307 ATCGCTGGCCCGTGAAGGAAGCAGCCCTTCCCAGTAGGGAAATGAGCTCAGTCCCAGGAGGTGACAGGAGCTCGTGTGGGGAGCCCACCCACAGATCTGGACATTAGGATGCAGGCAGAGATGAAAA----GCTTGGCACCCGCAGCAGC-ACAAACTCCAAATGGTGCAGTTACCGAGGCGGGCGCTGGAGGGCAGTGAGTTGGACCCGTGGGTGGCTCTCATCTCAGAGTAGTCGCTGCAGGCCCTGTGGCTCAGGTCCAGGCTCAGGCGTCCCTGGTGCTGGACACTGT--GTAAAAAC--AAGAGGTGAGGAGTTCCGgaagagacacagaaacagaTGTGGCCA---------CTGGGAAGAAACACACAGACCAGCCAAGGCTTCCCAAGCAGGCAGAAGGGAGGCC-CAGGAGCCACTGATGATCGGCCAACGATA--------------------------------------------G-CCTTCAAGCAGTAGAAAAGGCCACACACACGGGGTGGCCAGTGTCATACCCACTTCAGCCATGGGGTCAGGATTAGGCTCACTAGGAGGAAGCGAT------------------AAAAAACAGAGGCTCTGGAACCTGGGTGGGCCCGGGGAGGGGGAACCTATTCTCCCAGGAAGTGGGTAAGGAGGGACAAGATGGGCAC-AGAGGACTTTGGGGAGGGGACCTATGTGCCTCACTCAGGACAGTGTGCCTAGGAAACTGGAC--GGCAGAG------CAGGGATCGCCCACGTCAGGCTGCCCTGAGGCCAGGCCTCAACAGCGTCTTTTTCTGGCTATGCAATGAGATGACATCTCTTCTCT-GCTTAAACTCTCCAGTGGTCTCCACTgtccttagaataaaatccaaactttttATCACGGCTGCAGGT---------------CCCTGTGACCTCAA----------------------------------------------------------------------ACCTCTTCCTGACTCGCTGTCCCTTTGCCAAGCTCCCA---------------------CCACTGTGCCCG--GGTACCCTGGCCTTGGCACTGATG----GCCCTTCTC-CCTGGAGGC--TCCAGTCCAGGTCTTGTACG-------------------GCTGGCCTCTTTCC------------------------TCCTTCTGGTCACAGCAGCA---------TCCCCTCTGCCACAGGGCCCTTTCTGACCACCCACTCTAACTTGCCACCCTCTTCCAAGTCACAGCCCAGCCTGTCACCCTGTTTGACCACCTTCATAGCCTCTCGTCACCATCTGATATTATTtcgttca--t-tttttttctgtctgcctCCCACATTTGTA-AAACCACACCACATGAGCTGGAAGCTAATCTGTTTAG--TTCTGCATTGTAT---TCTCTTATAATTAGGATAGACCAaggcatgcagtaggtgctca i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72089359 1244 - 125710982 ATCGCTGGCCCGTGAAGGAAGCAGCCCTTCCCAGTAGGGAAATGAGCTCAATCCCAGGAGGTGACAGGAGCTCGTGTGGGGAGCCCACCCGCAGATCTGGACATTAGGATGCAGGCAGAGATGAAAA----GCTTGGCACCCGCGGCAGC-ACAAAGTCCAAATGGTGCAGTTACCGAGGCGGGCGCTGGAGGGCAGTGAGTTGGACCCGTGGGTGGCTCTCATCTCGGAGTAGTCGCTGCAGGCCCTGTGGCTCAGGTCCAGGCTCAGGCGTCCCTGGTGCTGGACACTGC--GTAAAAAC--AAGAGGTGAGGAGTTCCGGAAGAGAAACAGAAACAGATGTGGCCA---------CTGGGGAGAAACACACAGACCAGCCAAGGCTTCCCAAGCAGGCAGAAGGGAGGCC-CAGGAGCCACTGATGATCGGCCAAGGATA--------------------------------------------G-CCTTCAAGCAGTAGAAAAGGCCACACACATGGGACGGCCAGTGTCATACCCACTCCAGCCATGGGGTCAGGATTAGGCTCACTAGGAGGAAGCGAT------------------AAAAAACAGAGGCTCTGGAACCTGGGTGGGCCCGGGGAGGGGGAACCTATTCTCCCAGGAAGTGGGTAAGGAGGGACAAGATGGGCAC-AGAGGACTTTGGGGAGGGGACCTATGTGCCTCACTCAGGACAGTGTGCCTAGGAAACTGGAG--GGCAGAG------CAGGGATGGCCCACGTCAGGCTGCCCTGAGGCCAGGCCTCAACAGCATCTTTTTCTGGCTATGCaatgagatgacatctcttccct-gcttaaactctccagtggtctccactgtccttagaataaaatccaaactttttatcacgactgcaggt---------------ccctgtgacctcaa----------------------------------------------------------------------acctcttcctgactcgctgtccctttgccaagctccca---------------------ccactgtgcccg--ggtaccctggccttggcactgatg----gcccttctc-cctggaggc--tccagtccaggtcttgtgcg-------------------gctggcctctttcc------------------------tccttctggtcacagcagca---------tcccctctgccatagggccctttctgaccactcactctaacttgccaccctcttccaagtcacagcccagcctgtcacc--gtttgaccaccttcatagcctctcgtcaccatctcacatcacttcgttca--t-tttttttctttctgcctcccacatttgta-aaaccacaccacatgagctggaagctaatctgtttag--ttcagcattgtat---tctcttataattaggatagaccaaggcatgcagtaggtgctca i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75546543 1306 - 121768101 ATGGCTGGCCCATGAAGGCAGCAGCCCTTCCCAG-AGGGAACTGAGCTCAGTCCCAGGAGGAGATAGGGGCTCATGTGGGGAGGCCACCCGCAGATCTGGGCATTAGGACGCAGGCAGAGATGAAAA----CTTTGGCACCCACTGCAGT-ACCAAATCCGAACGGTGCAGTTACCTAGGCGGGCGCTGGAGGGCAGTGAGTTGGACCCGTGGGTGGCTCTCATCTCAGAGTAGTCGCTGCAGGCCCTGTGGCTCAGGTCCAGGCTCAGGCGTCCCTGGTGCTGGACACTGA--GTAAAAAC--AAAAGGTGAGGAGTTCGGGAGAAAGACCAAGAACAGATGTGACCATCCACATCTCTGGGGAGAA----ACAGACCAGCCAGG--TTCCCAAGCGGGCAGAAGGGAGGCC-CAGGAGCCACTGATTATCAGCCGAGGATACCAGGCTGCCCTCAGCCAC-TCCCGGAGGTGGCATCCACCAAGGA-CCTTCAAGCAGTAGAAAAGGCCATATGCATGTGGCAGGCGGTATCACACCCACTCCAGCCACAGGGTCAGGATCAGGTTCACTAGGAGGAAGCAAT------------------GAAAACCACAGGCTCTGCAACCTGGGTGGGCCCAGAGAGCGGGAACCTCTCCTCCCTGGAGGTGGGTAAGGAGGGACAAGATGGGCAT-GGAGGACTTTGGGGAGGAGACCTACGTGCCTCAATCGGGACAGAGTACCTAGAAAACTGGAG--GGCAGAG------CAGGGATCGCCCACGTCAGGCTGCCCTGAGGTCAGGCCTCAGCAGCATCTTTTTCTGGCTGTataatgagatgacatctcttccct-gcttaaactctctagtgatctacactgtccttagaataaaatccaaactctttat-acggctgcaggtcccacaaggtttgtgccctgtgacctcag----------------------------------------------------------------------acctcttcctgactcactgactctttgccaagctccca---------------------ccactGTGCCTG--GGAACCCTggctttggcaccaatg----gcccttctc-cctggaggc--tccagcctaggtcttgtgca-------------------gctggcctctttca------------------------tccttctggtcacagcagca---------tcccctctgcctcagggcccttcttgaccacccactctaacttaccaccctcttccaagtcacagcccagcctgtcaccctgtttgactgccttcagagcctctcggcaccatctaatatcactctattga--c-ttgttttctgtctgcctcccacatttgaatacaccacaccacatgagccggaagctaatctctttag--ttcagcattgcat---cctcttataattagggtagaccaagacatgtagtaggtactca i calJac3.chr12 C 0 C 0 s mm10.chr14 24155026 1158 + 124902244 ATGGACAGCTCAC-AGGATATCAGCCGTCCAGAGGAGGGAGCTGA---------------GGGAAAGGAG-TCACGTGGGCAGCCCACCCAGAGCCCTGGGTACTAAAACCCGAGCA------------------------------------------CCAGTGGT--AGTTACCAAGGCGGGCACTGGAGGGCAGAGAGTTGGAACCCTGGGAGGCTCTCATCTCAGAGTAGTCACTGCAGGCCCTGTGGCTCAGGTCCAGGCTGAGGCGTCCCTGATGCTGGACACTGTGAGTGAATCA--GAAAGATGAGGGGCCCTGTAGAAGGGCTAAGACCAGACATGACCA---------CCAAGGAGAAACCCAGTAAACAGCCTGAACCTCCCTA--AGGCAAAAGAG----T-AAAGTGTCCTTGCTG-TTTGCCTAGGATAGCAGACTGACACCAGTTGCTTCTCACAGACAGCATCTATTCAGGA-CCCATCAGCGGCAGA---GGGACCACACAAGGGGCAGT----------------------ACGGGGGTTGGAT-------------GGACAGGGAG------------------AACA-----AGACTTTGC--CTTGAGTGGCCATGGTCCGGGGGAGGCTG------------------------------GATGTGCACTTGAGGGTCCTGAATAGAGCAGCGCTGTAACTCACTCAGGACAGCATGCCCAGGAGGCTGGGGCTAGTAGAGATTGGCCAGGGGCTGTCTACA-CTGGCTGGCCTGGAGCCAGTCC-CAACAAAGTGGTTT--AGGCTGCGCAGTGA--TGACATCTCTTCCCTCACTTAAA------ACTGACCCCCA--GCCCCCGCCATGATCTCC----------------CCATAGGTCTTTCAGAGTTCCTGCCTT---AGCCTGG----------------------------------------------------------------------GTCTCCTCCTGACTGGCAGGCAC----CCAGCCCTCCA---------------------CCCTCAGTCCTGCAGCTCTTCTCACATGGGCACTGTTGTTTTATTTTTCTCACATGGAggcattaaagccagggccctgtgcatgcaggcacgtgctctgccactgacctacatcccagctcTTATGGCTGCCGTCACTGTTCTTCTAGTAACGACAGCT---------GCTCATATGCCAGAGTACCCTCTGCAACCTCTGTC-----CTAGACACCTTCTTTCCTGTCACAGCCCAG-CTGTCACCCTGTTTCACTGTC-TCAGGGCCATTTACCACCA--------CACCCTGTGCA--TATTCTCACCTGTCTGCCTTCCATATGAGTG-GA------------------------AAGCTGTCTGGCTTTTACCACTATCT---GATCTTGAAACCAGAACGACCATTGGAGCAGAGTAGGTGCTCA i mm10.chr14 I 42049 I 123 s canFam3.chr4 27710230 1210 + 88276631 ---GCCACCCTGCCATGGAAGC-------------AGGGAA--------------------------GGGCCTGTGTGGGCAGGCGATATGGAGGTGGGGCCATGAGGATGGAGGTGGAGAGGGAAACAAGGCTAGTACCCCGCTACGGTGAGAAGGCTCTAGTGGCACCATTACCGAGGCGGGCGCTGGAGGGCAGAGAGTTGGACCCGTGGGAGGCTCTCATATCTGAGTAGTCGCTGCCAGACCTGTGGCTCAGGTCCAGGCTCAGGCGTCCCTGGTGCTGGACGCTGC--AAGAGAACCACATAAGTGAGGTGCTTGGGAGGAAGACCAGGGCTAGAGGCGGC-----------CTGG------------------GCCAAGGCCTCCC-------------GGAGCCCACAGAAGCCACCTGCCGGTAGCTGGGGACAGCAGACTGCCAT--------GCTCAGAGGCAGCATCCAACGAGGGTCCCGCCCACAG-AGAAAGGGCTGTGCAGGTAGAG----GAGTGGCATATCTACTTCAGCCCTGGA--CTGGACTGGCCTCACCAGGAGcaagggcttccacaagggcttccacCGGGAAAAACAGGCCCTG-AACCCG---GGGCCCAGAGAAGTGGAGCCTCTTCTCC-------------AGGATGGGCGGGAGAGGCTG-GATGGAC--------AGGGACCTGCACACCTCACTCAGGCCAGC-TGCCAAGAACAGTGGAG--CGCAGAG----CCCAGGCTTCACCCATCTCGGGTGGGTCTACAATCAGACC-CAGTGATGCCCTTTTCTCGCTGCGTAATGA---GACATCTCTTCCCC-ACCTAAAGCCTAGACTAACA-----------------AAAACCCAACCTCTGCATCATGGCCGTAGGA---------TCTGTGCCCTACAACCTGTG----------------------------------------------------------------------CTCTCCTCCTGACTCACGGCACCTGGGCCAAGCTCCCGACTCTGCCCCAGGAGCCCAGCCCACTGTTCCCA--GGGATCTGGGCTGTGGCTCCCACG-----CCTGCCTT-CCTGGGGAC--TCCA-CCTAGGTCTTGTGCA-------------------GCTGGC---TCTCA------------------------GCCTCCCGATCTCGGTAGCATCCCCCTCTTCCCCTCTTCCATGGGCCCTCCCCT--CCACCCAGTCCA-CTCTCCACCCTCTTCCAAGTCGCAACCTAGCTGGTCGCCCTTTGCTGCAGCCTTCAGAGCTACTCAGCACCACCCAGTACCCCTCTGTTCA--C-TCttctc--atctgcctcccactctcaga-cataaacatcccatgaga-agcagctcactgattacg--tcctccactgtatatcccccctggaactacgacagtccatgctacatagtaggtgacca i canFam3.chr4 C 0 C 0 a score=784709.000000 s hg38.chr10_KI270825v1_alt 57600 239 + 188315 aaaaatatctgtcaaatgaatgaatAA--GAgtggcttggagccagcccaccctcttatgaagtaccagtttcctcatcttcaagacagaaacagtaataggacttagcccatgaggttgctgttga--ttcggtgaaatgatattcataaaggtctgagcacagtggctgggacataagcactcaaacatcagctgctatcactATCGTGTCCTT----CCAGTACCTTTTGAAACCTTGTGCTGA s panTro4.chr10 76428297 239 + 133524379 aaaaatatctgtcaaatgaatgagtAA--GAgtggcctggagccagcccaccctcttatgaagtaccagtttcctcatcttcaagacagagacagtaataggacttagcccatgaggttgctgttga--ttcggtgaaatgatattcataaaggtctgagcacagtggctgggacataagcactcaGACATCAGCTGCTATCACTATCGTGTCCTT----CCAGTACCTTTTGAAACCTTGTGCTGA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76098042 239 - 133410057 aaaaatatctgtcaaatgaatgaGCAA--GAgtggcctggagccagcccaccctcttatgaagtaccagtttcctcatcttcaaaacagagacagtaataggacttagcccatgaggttgctgttga--ttcggtgaaatgatattcataaaggcctgagcacagtggctggcacataagcactcaaACATCAGCTGCTATCAGTATCGTGTCCTT----CCAGTACCTTTTGAAACCTTGTGCTGA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35039465 239 + 104879549 aaaaatatctgtcaaatgaatgagtAA--GAgtggcctggagccagcccaccctcttatgaagtaccagtttcctcatcttcaagacagagacagtaataggacttagcccatgagggtgctgtcga--ttcagtgaaatgatattcacaaaggtctgagcacagtggctggggcataagcactcaaacatcagctgctatcactATCGTGTCCTT----CCAGTACCTTTTGAAACCTTGTGCTGA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73832589 238 - 130959383 aaaaaaatctgtcaaatgaatgagtAA--CAgtggcctggagccagcccaccctcttatgaagtatccgtttcctcatcttgaagacagagacagtaacaggacttagcccatgaggttgctgttga--ttcggtgaaatgatattcataaaggtctgggcacagtggctgggacataagcactcaaatatcagttgctatCACTATTGTGTCCTT-----CAGTACCTTTTGAAACCTTGTGCTGA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75393877 238 - 133195287 aaaaaaatctgttaaatgaatgagtAA--CAgtggcctggagccagcccaccctcttatgaagtatccgtttcctcatcttgaagacagagacagtaacaggacttagcccatgaggttgctgttga--ttcggtgaaatgatattcataaaggtctgggcacagtggctgggacataagcactcaaatatcagttgctatCACTATCGTGTCCTT-----CAGTACCTTTTGAAACCTTGTGCTGA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73258625 238 - 125196307 aaaaaaatctgtcaaatgAATGAGTAA--CAGTGGCCTGGAGCCAGCCCACCCTCTTATGAagtatcagtttcctcatcttgaaGACAGAGACAGTAACAGGACTTAGCCCATGAGGTTGCTGTTGA--TTCGGTGAAATGATATTCATAaaggtctgggcacagtggctgggaCATAAGCACTCAAATATCAGTTGCTATCACTATCAAGTCCTT-----CAGTACCTTTTGAAACCTTGTGCTGA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72090603 238 - 125710982 aaaaaaatctgtcaaatgaatgagtAA--CAgtggcctggagccagcccacgctcttatgaagtatcagtttcctcatcttgaagacagagacagtaacaggacttagcccatgaggttgctgttga--ttcggtgaaatgatattcataaaggtctgggcacagtggctgggacataagcactcaaatatcagttgctatCACTATCGTGTCCTT-----CAGTACCTTTTGAAACCTTGTGCTGA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75547849 227 - 121768101 ataaaaatctgtcaaatg-------aa--AAgtggcctagagccagcccatcctcttat---gtatcagtttcctcatcttgaagacagagacagtaataggacttagcccatgaggttgctgttga--ttcagtgaaatgatattcataaaggtctgagcacaatgcctgggacataggcactcaaatatcagctggtatCACTAC--TGTCCTT----TCAGTACCTTTTGAAACCTTGTGCTGA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27711440 237 + 88276631 attagaacttgc--aatgactgaatgaatgaatgaccttgagccagcccattcaccttttaaggctcagtctcctcatccacaaaacggagacaacagt--------gctcacggggttgctgtggcctttaaatgagatgaggtttacaaaggtcccagtacactgtctggcacgtgagcacttaaGCACCAGCTGCCATTACTCTCTCTCTCTTTCTCTCTCTACTTTTATAAGCTCCGTGCTGG i canFam3.chr4 C 0 C 0 e mm10.chr14 24156184 123 + 124902244 I a score=1922771.000000 s hg38.chr10_KI270825v1_alt 57839 513 + 188315 TGAATTCAGAAAGCAGCCCTAAGGCTCCCTTTCCCT---------GTGCTGCTCTAGCCAGTCCCCTCCCAGGCAGGCAAGGAAGCTTCTCCACCAATGAGCCTCTTTATGCACTCATGGTTCCATGTCCAGGCAGGCTTGGGCAGCTGGAGTACAGAGAAGCGTA-GGGTGCCTTCACATACCTGGGATGCAAACCCTGGGGGCCAGCATCTCGGGCCGCAGGTGGAGAGCTGCAGGGGCCGACCCTGTGACTGCGCACAGTGTAGATGGGGTTCCGCAGGATGGAGCTCACAGTGGTGCTGGGGGTCAAACTCCGGGGAACAGTGCCTAGAAATGGGCTTGGTGAGAAAAGACGCCCCAAAGGACCCAGCCAGCCCAGGACTTACACAAGCCTTTCCCCTGTATCCCAGGACGCAGCCGCAGTCTTTTGGGAAAAGGACT-TGGGAGATGAGTTTTAACCACC-AATTCACAATGTGGCTGTGGCTCCTGGCCTGTCTCCATTTGTAAAAAGGGGGGAAGTCT s panTro4.chr10 76428536 513 + 133524379 TGAATTCAGAAAGCAGCCCTAAGGCTCCCTTTCCCT---------GTGCTGCTCTAGCCAGTCCCCTCCCAGGCAGGCAAGGAAGCTTCTCCACCAATGAGCCTCTTTATGCGCTCATGGTTCCATGTCCAGGCAGGCTTGCGCAGCTGGGGTACAGAGAAGCGTA-GGGTGCCTTCACATACCTGGGATGCAAACCCTGGGGGCCAGCATCTCGGGCCGCAGGTGGAGAGCTGCAGGGGCCGACCCTGTGACTGCGCACAGTGTAGATGGGGTTCCGCAGGATGGAGCTCACAGTGGTGCTGGGGGTCAAACTCCGGGGAACAGTGCCTAGAAATGGGCTTGGTGAGAAAAGACGCCCCAAAGGACCCAGCCAGCCCAGGACTTACACAAGCCTTTCCCCTGTATCCCAGGACGCAGCCGCAGTCTTTTGGGAAAAGGACT-TGGGAGATGAGTTTTAACCACC-AATTCACAATGTGGCTGTGGCTCCTGGCCTGTCTCCATTTGTAAAAAGGGGGGAAGTCT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76098281 513 - 133410057 TGAATTCAGAAAGCAGCCCTAAGGCTCCCTTTCCCT---------GTGCTGCTCTAGCCAGTCCCCTCCCAGGCAGGCAAGGAAGCTTCTCCATCAATGAGCCTCTTTATGCACCCGTGGTTCCATGTCCAGGCAGGCTTGGGCAGCTGGGGTACAGAGAAGCGTA-GGGTGCCTTCACATACCTGGGATGCAAACCCTGGGGGCCAGCATCTCGGGCCGCAGGTGGAGAGCTGCAGGGGCCGACCCTGTGGCTGCGCACAGTGTAGATGGGGTTCCGCAGGATGGAGCTCACGGTGGTGCTGGGGGTCAAACTCCGGGGAACAGTGCCTAGAAATGGGCTTGGTGAAAAAAGTCGCCCCAAAGGACCCAGCCAGCCCAGGACTTATACAAGCCTTTCCCCTGTATTCCAGGATGCAGCCGCAGTCTTTTGGGAAAAGGGCT-TGGGAGATGAGTTTTAACCACC-AATTCATAATGTGGCTGTGGCTCCTGGCCTGTCTCCATTTGTAAAAAGGGGGCAAGTCT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35039704 512 + 104879549 TGAATTCAGAAAGCAGCCCTAAGGCTCCCTTTCCCT---------GTGCTGCTATAGCCAGTCCCCTCCCAGGCAGGCAAGGAAGCTTCTCCACCAATGAGCCTCTTTATGCGC-CGTGGTTCCATGTCCAGGCAGGCTTGGGCAGCTGGGGTACAGAGAAGCGTA-GGGTGCCTTCACATACCTGGGATGCAAACCCTGGGAGCCAGCATCTCGGGCTGCAGGTGGAGAGCTGCAGGGGCCGACCCTGTGGCTGCGCACAGTGTAGATGGGGTTCCGCAGGATGGAGCTCACGGTGGTGCTGGGGGTCAAACTCCGGGGAACAGTGCCTAGAAATGGGCTTGGTGAGAAAAGTCGCCCCAAAGGAGCCGGCCAGCCCAGGACTTATACAAGCCTTTTCCCTGTATCCCAGGACGCAGCCGCAGTCTTTTGGGAAAAGGACT-TGGGAGATGAGTTTTAACTACC-AATTCACAATGTGGCTGTGGCTCCTGGCCTGTCTCCATTTGTAAAAAGGGGGGAAGTCT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73832827 511 - 130959383 TTAATTCAGAAAGCAGCCCTAAGGATCCC-TTTCCT---------GTGCTGCTCTAGCCAG-CCCCTCCCAGTCAGGCAAGGAAGCTTCTCCACCAGTGAGCCTCTTTATGCACCAGTGGTTCCATGTCCAGGCGGGCTTGGGCAGCTGGGGTACAGAGAAGCGTA-GGGTGCCTTCACATACCTGGGATGCAAACCCTGGGGGCCAGCATCTCGGGCCGCAGGTGGAGAGCTGCAGGGGCCAACCCTGTGGCTACGCACAGTGTAGATGGGGTTCCGCAGGATGGAGCTCACGGTGGTGCTGGGGGTCAAACTCCGGGGAACAGTGCCTAGAAATGCGCTTGGTGAGAAGAGTCGCCCCAAAGGACCCAGCCAGCCCTAGACTTAAACAAGCCTTTTCCCTGTATCCCAGGACGCAGCCCCAGTCTTTTGGGAAAAGGACT-TGGGAGATGAGTTTTAACCATC-AATTCACAATGTGTCTGTGGCTCCTGGCCTGTCTCCATCTGTAAAAAGTGGGGAAGTCT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75394115 511 - 133195287 TTAATTCAGAAAGCAGCCCTAAGGATCCC-TTTCCT---------GTGCTGCTCTAGCCAG-CCCCTCCCAGTCAGGCAAGGAAGCTTCTCCACCAGTGAGCCTCTTTATGCACCAGTGGTTCCATGTCCAGGCAGGCTTGGGCAGCTGGGGTACAGAGAAGCGTA-GGGTGCCTTCACATACCTGGGATGCAAACCCTGGGGGCCAGCATCTCGGGCCGCAGGTGGAGAGCTGCAGGGGCCAACCCTGTGGCTACGCACAGTGTAGATGGGGTTCCGCAGGATGGAGCTCACGGTGGTGCTGGGGGTCAAACTCCGGGGAACAGTGCCTAGAAATGCGCTTGGTGAGAAGAGTCGCCCCAAAGGACCCAGCCAGCCCTAGACTTAAACAAGCCTTTTCCCTGTATCCCAGGACGCAGCCCCAGTCTTTTGGGAAAAGGACT-TGGGAGATGAGTTTTAACCATC-AATTCACAATGTGTCTGTGGCTCCTGGCCTGTCTCCATCTGTAAAAAGTGGGGAAGTCT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73258863 509 - 125196307 TTAATTCAGAAAGCAGCCTTAAGGCTCCC-TTCCCT---------GTGCTGCTCTAGCCAG-CCCCTCCCAGTCAGGCAAGGAAGCTTCTCCACCAGTGAGCCTCTTTATGCACCAGTGGTTCCATGTCCTGGCGGGCTTGGGCAGCTGGGGT--AGAGAAGCGTA-AGGTGTCTTCACATACCTGGGATGCAAACCCTGGGGGCCAGCATCTCGGGCCGCAGGTGGAGAGCTGCAGGGGCCAACCCTGTGGCTACGCACAGTGTAGATGGGGTTCCGCAGGATGGAGCTCACGGTGGTGCTGGGGGTCAAACTCCGGGGAACAGTGCCTAGAAATGCGCTTGGTGAGAAGAGTCGCCCCAAAGGACCCAGCCAGCCCTGGACTTAAACAAGCCTTTTCCCTGTATCCCAGGACGCAGCCCCAGTCTTTTGGGAAAAGGACT-TGGGAGATGAGTTTTAACCATC-AATTCACAATGTGGCTGTGGCTCCTGGCCTGTCTCCATCTGTAAAAAGTGGGGAAGTCT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72090841 511 - 125710982 TTAATTCAGAAAGCAGCCCTAAGGCTCCC-TTCCCT---------GTGCTGCTCTAGCCAG-CCCCTCCCAGTCAGGCAAGGAAGCTTCTCCACCAGTGAGCCTCTTTATGCACCAGTGGTTCCATGTCCAGGCAGGCTTGGGCAGCTGGGGTACAGAGAAGCGTA-GGGTGCCTTCACATACCTGGGATGCAAACCCTGGGGGCCAGCATCTCGGGCCGCAGGTGGAGAGCTGCAGGGGCCAACCCTGTGGCTACGCACAGTGTAGATGGGGTTCCGCAGGATGGAGCTCACGGTGGTGCTGGGGGTCAAACTCCGGGGAACAGTGCCTAGAAATGCGCTTGGTGAGAAGAGTCGCCCCAAAGGACCCAGCCAGCCCTGGACTTAAACAAGCCTTTTCCCTGTATCCCAGGACACAGCCCCAGTCTTTTGGGAAAAGGACT-TGGGAGATGAGTTTTAACCATC-AATTCACAATGTGGCTGTGGCTCCTGGCCTGTCTCCATCTGTAAAAAGTGGGGAAGTCT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75548076 512 - 121768101 TGAGTTAAGAAAGCAACCCTAAGGCTCCCTTTCCCT---------GCGTTGCTCTAGCCAG-CCCCTCACAGCCAGGCAAGGAAGCTCCTCCACTGATGAGCCTCTTTATGCACCTGTGGTTCCATGTCCAGGCAGGCTTGGGAAGCTGGGGTACAGCGAAGCACA-GGGTGCCTTTACATACCTGGGATGCAAACCCTGGGGGCCAGCGTCTCGGGCCGCAGGTGGAGAGCTGCAGGGGCCAACCCTGTGGCTGCGCACGGTGTAGATGGGGTTCCGCAGGATGGAGCTCATGGTGGTGCTGGGGGTCACGCTCCGGGGAACAGTGCCTAGAAATGGGCTTGGTGAGAAAAGTCACCCCAAAGTACCCAGCCAGCTCTGGACTTATATAAGCCCTTTCCCTGTATCCTAGGAAGCAGCTACAGTCTTTGGGGAAAAGGACT-TGGGAGATGAGTTTTAACCACC-AATTCACAATGTGGCTGTGGTTCCTGGCCTGTCTCCATCTGCAAAATGAGGGGAAGTCT i calJac3.chr12 C 0 C 0 s mm10.chr14 24156307 481 + 124902244 TGAGCTTATATGGCATCCTCCAAGCCCAG-CTCTGC---------CTCCTCACCTCCTCAG-CCCTTCCCTAGCTAGCCAAGAGGCTTTTCTGTCCACAAGCCTCTGTGTG----AATAGTTCTCCGACCAGG--AGACTGGACAGCTG--GCACTCGGGATCGGATGGGTGCCTTGACATACCTGGGAGACAAGCTCTGGGAGCCAGCATCACGGGGCACGGGTGGTGAGCCGCAGGGAAGCACCCTGTGGCTGCGCACAGTATAAATGGGGTTCCTCAGAATGGAGCCCACAGTGGTGCCGGGGGTCATACTCCGGGGAACGGTGCCTAGAAATGAGCTGGGTCAGAACAGTGGCTCCAGAAAACCCTGACAGCACC---CTCCCACAAAC----------------ACCAAACAGCCGCAGTCTTTAAGAAAAAGGACTCTAGGTAGAGACTTTTAGCCACCGAATTTGCCACATGACTTTGACCACTGGCCTTTCCCCAACCATAA------GAGAAGACT i mm10.chr14 I 123 I 59 s canFam3.chr4 27711677 416 + 88276631 TGCATGAAGAGAGCATCCTCAGACTTCACTTTTCCTGGGGCCCCAGTGTGGCTCTAATCAGCCCCTTCTCGGCCTCGCAAGGACACT-CTCTGCCTGCAGACCACTTTATGCACCAGTGGCTGTATGTGCACGCGGGCCTGGCCAGCCAGGGTGCAGGGAGGTGTG-GGCTGACTTCACATACCTGGGATGCAAACCCTGGGGGCCGACCTCTCTGGGCACAGGCGGGGAGCTGCAGGGGCCGACCCGGTGGCTCCGCACGGTGTAGATGGGGTTCCTTAGGATGGAACTCACAGTGGTGCTCGGGGTCATACTCCGGGGAACGGTGCCTAGAAATGGGCTGGGTAAGAACGATCATCCCA-----------CAGCCCCAGGCCTATGCAAGC--------------------------------------------------T----------------------AGT-----------------------GGCTTTCTCCACCTGTACAATG-GAGGAACTCA i canFam3.chr4 C 0 C 0 a score=388691.000000 s hg38.chr10_KI270825v1_alt 58352 123 + 188315 CTTTCATGCTTCCTATTTCCCAGGTTGCTATGGGGAGAAAGCATGTTGACAAGCTAAGACATGTCATGGCTATAAGACAAACCATCCCAGACAGGACAGCATTTCCCAGTTCTCTGGACCTCA s panTro4.chr10 76429049 123 + 133524379 CTTTCATGCTTCCTATTTCCCAGGTTGCTATGGGGAGAAAGCATTTTGACAAGCTAAGACATGTCATGGCTATAAGACAAAGCATCCCAGACAGGGCAGCATTTCCCAGTTCTCTGGACCTCA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76098794 123 - 133410057 CTTTCATGCTTCCTATTTCCCAGGTTGCTATGGGGAGAAAGCATTTTGACAAGCTAAGACATGCCATGGCTACAAGACAAACCATCCCAGACAGGGCAGCATTTCCCAGTTCTCTGGACCTCA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35040216 123 + 104879549 CTTTCATGCTTCCTATTCCCCAGGTTGCTATGGGGAGAAAGCATTTTGACAAGCTGAGACATGTCATGGCTATAAGACAAACCATCCCAGACAGGGCAGCATTTCCCCGTTCTCTGGACCTCA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73833338 114 - 130959383 CTTTCATGCTTCCTATTTCCCA---------GGGGAGAAAGCATTTTGACAAGCTTAGACATGTCATGTCTACAAGACAAACCATCCCAGACAGGGCAGCATTTCCCAGTTCCCTGGACCTCA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75394626 114 - 133195287 CTTTCATGCTTCCTCTTTCCCA---------GGGGAGAAAGCATTTTGACAAGCTTAGACATGTCATGTCTACAAGACAAACCATCCCAGACAGGGCAGCATTTCCCAGTTCCCTGGACCTCA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73259372 114 - 125196307 CTTTCATGCTTCCTATTACCCA---------GGGGAGAAAGCATTTTGACAAGCTTAGACATGTCATGGCTACAAGACAAACCATCCCAGACAGGGCAGCATTTCCCAGTTCCCTGGACCTCA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72091352 114 - 125710982 CTTTCATGCTTCCTATTTCCCA---------GGGGAGAAAGCATTTTGACAAGCTTAGACATGTCATGGCTACAAGACAAACCATCCCAGACAGGGCAGCATTTCCCAGTTCCCTGGACCTCA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75548588 117 - 121768101 CTTTCATGATTCCTATGTCCCAGGTTGCTACGGGGAGGAAGCTCTTTGACAAGCT--GACATGTCATGGCTGTAAGACAAACCATCC----CAGGGCAGCATTTCCCAGTTCTCTGGACCTCA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27712093 123 + 88276631 CTTTACTGCTTCCTATTTCCCAGGCTACAGTGGGAAGAAGGTGCTCTGAGAAGCTAAGAAATGTCCCTGATATGACACTGAACATCCCAGACAGGGAAGCCACTGCTCGTTCTTTGGACCTCT i canFam3.chr4 C 0 C 0 e mm10.chr14 24156788 59 + 124902244 I a score=647636.000000 s hg38.chr10_KI270825v1_alt 58475 176 + 188315 GGGCTGAAAACA-------CATGGC--AGCTCTCTGAAATG-CTGCCTCCCCTCTCCCTGGAGACTAGGCATCCC----GAGTTTACACCGACCCTCAGCCCCAGCCCCTGGCTGGCTGACTCACCCACAGACGGCCTGCTAGGGTATAGCGGGGGGTTGCTGTGCCGGCTGGAATGCCCAGGCGAGTAA s panTro4.chr10 76429172 176 + 133524379 GGGCTGAAAACA-------CATGGC--AGCTCTCTGAAATG-CTGCCTCCCCTCTCCCTGGAGACTAGGCATCCC----GAGTTTACACCGACCCTCAGCCCCAGCCCCTGGCTGGCTGACTCACCCACAGACGGCCTGCTAGGGTATAGCGGGGGGTTGCTGTGCCGGCTGGAATGCCCAGGCGAGTAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76098917 185 - 133410057 GGGCTGAAAACAAAGACCTCAGGGCTGAAAACTCTGAAATG-CTGCCTCCCCTCTCCCTGGAGACTAGGCATCCC----GAGTTTACACCAACCCTCAGCCCCAGCCCCTGGCTGGCTGACTCACCCACAGACGGCCTGCTAGGGTATAGCGGGGGGTTGCTGTGCCGGCTGGAATGCCCAGGCGAGTAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35040339 176 + 104879549 GGGCTGAAAACA-------CATGGC--AGCTCTCTGAAATG-CTGCCTCCCCTCTCCCTGGAGACTAGGCATCCC----GAGTTTACACCGACCCTCAGCCCCAGCCCCTGGCTGGCTGACTCACCCACAGATGGCCTGCTAGGGTATAGCGGGGGGTTGCTGTGCCGGCTGGAATGCCCAGGCGAGTAA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73833452 169 - 130959383 GGGCTGAAAAGT-------CATGGC--AGCTCTCTGAAATG-CTGCCTCCCCTCTCCCTGGAGACTAGGCATCCC----GCGTTTACACCGACCCTCAG-------CCCTGGCTGGCTGACTCACCCACAGACGGCCTGCTAGGGTATAGCGGGGGGTTGCTATGCCGGCTGGAATGCCCAGGTGAGTAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75394740 169 - 133195287 GGGCTGAAAAGT-------CATGGC--AGCTCTCTGAAATG-CTGCCTCCCCTCTCCCTGGAGACTAGGCATCCC----GCGTTTACACCGACCCTCAG-------CCCTGGCTGGCTGACTCACCCACAGACGGCCTGCTAGGGTATAGCGGGGGGTTGCTATGCCGGCTGGAATGCCCAGGTGAGTAA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73259486 176 - 125196307 GGGCTGAAAAGT-------CATGGC--AGCTCTCTGAAATG-CTGCCTCCCCTCTCCCTGGAGACTAGGCATCCC----GAGTTTACACCgaccctcagccccagcccctggctgGCTGACTCACCCACAGACGGCCTGCTAGGGTATAGCGGGGGGTTGCTATGCCGGCTGGAATGCCCAGGTGAGTAA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72091466 176 - 125710982 GGGCTGAAAAGT-------CATGGC--AGTTCTCTGAAATG-CTGCCTCCCCTCTCTCTGGAGACTAGGCATCCC----GAGTTTACACCGACCCTCAGCCCCAGCCCCTGGCTGGCTGACTCACCCACAGACGGCCTGCTAGGGTATAGCGGGGGGTTGCTATGCCGGCTGGAATGCCCAGGTGAGTAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75548705 176 - 121768101 GGGCTAAAAACA-------CATGGC--AGCTCTCTGAAATG-CTGCCTCCCCTCTCCCTGGAGACTAAGCAGCCC----AAGTCTATACCGATCCTCAGTCCCAGTCCCTGGCTTGCTGACTCACCCACAGACTGCCTGCTAGGGTACAGCGGGGGATTGCTGTGCCGGCTGGAATGCCCGGATGAGTAA i calJac3.chr12 C 0 I 1555 s mm10.chr14 24156847 163 + 124902244 GGGCTGAACATA-------TGTGAC--AATA----------------TCCCCTCTTCAGAAAGGCTGGTCTTCCCTGT-GAGCCCAGAACAACCCT-GCTCCCAGTCCCTGTCCCAGAAGCTTACCCACAGATGGCCGGTTGGGGTAGAGTAGGGGGTTGCCATGCCGGCTAGCATGCCCTGGTGAGTAC i mm10.chr14 I 59 C 0 s canFam3.chr4 27712216 171 + 88276631 GGTCTGAGGACA-------CACAGA--GGCACCTTGAAATGACTGCCTCCGCTCTCCCTGG-GACCAG-CAGCCCTGCGAGGCCAGCATGAACCCTCCTCGCC--------GCCCAACGACTCACCCACAGATGCCCTGCCAGGGTACAATGGGGGGTTGCTGTGCCGGCTGGAGTGCCCTGGTGAGTAC i canFam3.chr4 C 0 C 0 a score=145672.000000 s hg38.chr10_KI270825v1_alt 58651 39 + 188315 GGTGCCCACTCCTGGAGCTCCGGGGAGAGTTCTCCACTG s panTro4.chr10 76429348 39 + 133524379 GGTGCCCACTCCTGGAGCTCTGGGGAGAGTTCTCCACTG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76099102 39 - 133410057 GGTGTCCACTCCTGGAGCTCCGGGGAGAGTTCTCCACTG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35040515 39 + 104879549 GGTGCCCACTCCTGGAGCTCCGGGGAGAGTTCTCCACTG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73833621 39 - 130959383 GGTGCCCACTCCTGGAGCTCCGGGGAGAGTTCTCCACTG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75394909 39 - 133195287 GGTGCCCACTCCTGGAGCTCCGGGGAGAGTTCTCCACTG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73259662 39 - 125196307 GGTGCCCACTCCTGGAGCTCCGGGGAGAGTTCTCCACTG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72091642 39 - 125710982 GGTGCCCACTCCTGGAGCTCCGGGGAGAGTTCTCCACTG i chlSab2.chr9 C 0 C 0 s mm10.chr14 24157010 39 + 124902244 GGGGACCATTCCTGACCCTCTGGGGAGAGCTCTCCGATG i mm10.chr14 C 0 I 3 s canFam3.chr4 27712387 39 + 88276631 GGGGACCATTCCTGGAGCTCTGGGCAGAGCTCTCCACTG i canFam3.chr4 C 0 C 0 e calJac3.chr12 75548881 1555 - 121768101 I a score=8090.000000 s hg38.chr10_KI270825v1_alt 58690 3 + 188315 GCC s panTro4.chr10 76429387 3 + 133524379 GCC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76099141 3 - 133410057 GCC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35040554 3 + 104879549 GCT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73833660 3 - 130959383 GCT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75394948 3 - 133195287 GCT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73259701 3 - 125196307 GCT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72091681 3 - 125710982 GCT i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27712426 3 + 88276631 GCC i canFam3.chr4 C 0 C 0 e mm10.chr14 24157049 3 + 124902244 I e calJac3.chr12 75548881 1555 - 121768101 I a score=164919.000000 s hg38.chr10_KI270825v1_alt 58693 48 + 188315 GGGACACACTTCTGTTCCTGCAGATGCAAGGGCAAGAGTGTCTGCTAG s panTro4.chr10 76429390 48 + 133524379 GGGACACACTTCTGTTCCTGCAGATGTAAGGGCAAGAGTGTCTGCTAG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76099144 48 - 133410057 GGGACACACTTCTGTTCCTGCAGATGCAAGGGCAAGAGTGTCTGCTAG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35040557 48 + 104879549 GGGACACACTTCTGTTCCTGCAGATGCAAGGGCAAGAGTGTCTGCTAG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73833663 48 - 130959383 GGGACACACTTCTGTTCCTGCAGATTCAAGGGCAAGAGTGTCTGCTAG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75394951 48 - 133195287 GGGACACACTTCTGTTCCTGCAGATTCAAGGGCAAGAGTGTCTGCTAG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73259704 48 - 125196307 GGGACACACTTCTGTTCCTGCAGATTCAAGAGCAAGAGTGTCTGCTAG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72091684 48 - 125710982 GGGACACACTTCTGTTCCTGCAGATTCAAGGGCAAGAGTGTCTGCTAG i chlSab2.chr9 C 0 C 0 s mm10.chr14 24157052 48 + 124902244 GGAACACACTCCTGTTCCTGCAGAGTCAAAGGCAAGAGTGTCTGCTGG i mm10.chr14 I 3 I 4 s canFam3.chr4 27712429 33 + 88276631 GGGATGCACTTCTGTTCCTGCAGGACCAAAGAC--------------- i canFam3.chr4 C 0 C 0 e calJac3.chr12 75548881 1555 - 121768101 I a score=69201.000000 s hg38.chr10_KI270825v1_alt 58741 31 + 188315 AAAGAGTGGAGTGTggccaggcgcagtggct s panTro4.chr10 76429438 31 + 133524379 AAAGAGTAGAGTGTggccaggcgcagtggct i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76099192 31 - 133410057 AAAGAGTGGAGCGTggccaggtgcagtggct i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35040605 31 + 104879549 AAAGAGTGGAGCGTggccaggcgcagtggct i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73833711 31 - 130959383 AAAGAGTGGAGTATggctgggcactgtggct i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75394999 31 - 133195287 AAAGAGTGGAGTATggctgggcactgtggct i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73259752 31 - 125196307 AAAGAGTGGAGcgtggctgggcactgtggct i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72091732 31 - 125710982 AAAGAGTGGAGCGTggctgggcaatgtggct i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27712462 14 + 88276631 -AAGAG----------------ACAGTGGCT i canFam3.chr4 C 0 C 0 e mm10.chr14 24157100 4 + 124902244 I e calJac3.chr12 75548881 1555 - 121768101 I a score=89809.000000 s hg38.chr10_KI270825v1_alt 58772 36 + 188315 cacacctataatcccagcactctgggaggccgaggc s panTro4.chr10 76429469 36 + 133524379 cacacctataatcccagcactctgggaggccgaggc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76099223 36 - 133410057 cacacctataatcccagcactctgggaggccgaggc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35040636 36 + 104879549 cacacctataatcccagcactctgggaggccgaggc i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73833742 36 - 130959383 cacacctgtaatcccagcactttgggaggccgaggc i rheMac3.chr9 C 0 M 296 s macFas5.chr9 75395030 36 - 133195287 cacacctgtaatcccagcactttgggaggctgaggc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73259783 36 - 125196307 cacacctgtaatcccagcactttgggaggctgagac i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72091763 36 - 125710982 cacacctgtaatcccagcactttgggaggccgaagc i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27712476 0 + 88276631 C e mm10.chr14 24157100 4 + 124902244 I e calJac3.chr12 75548881 1555 - 121768101 I a score=183628.000000 s hg38.chr10_KI270825v1_alt 58808 102 + 188315 gggcagatcacctaaggtcaggagttcaagaccaccctggccaacatggcgaaatcccgtctctaccaaaaatacaaaaattagctgggcatggtagtgggt s panTro4.chr10 76429505 102 + 133524379 gggcagatcacctaaggtcaggagttcaagaccaccctggccaacatggcgaaatcccgtctctaccaaaaatacaaaaattagctgggcatggtagtgggt i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76099259 102 - 133410057 gggcagatcacctaaggtcaggagttcgagaccaccctggccaacatggcgaaaccccatctctattaaaaatacaaaaattagctgggcatggtagtgggt i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35040672 102 + 104879549 gggcagatcacctgagatcaggaattcgaaaccaccctggccaacatggcgaaaccccgtctctactaaaaatacaaaaattagctgggcatggtagtgggt i nomLeu3.chr18 C 0 C 0 s macFas5.chr9 75395066 102 - 133195287 aggcagatcacctgaggtcaggagtttgagaccatcctggccaacatggcgaaaccccatctttactaaaaatacaaaaattacctgggcatggtagtgggt i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73259819 102 - 125196307 aggcggatcacctgaggtcaggagtttgagaccatcctggccaacatggcgaaaccccatctttactaaaaatacaaaaattacctgggcatggtagtgggt i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72091799 102 - 125710982 aggcggatcacctgaggtcaggagtttgagaccatcctgaccaacatggcgaaaccccatctttactaaaaatacaaaaattacctgggcatggtagtgggt i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27712476 0 + 88276631 C e mm10.chr14 24157100 4 + 124902244 I e calJac3.chr12 75548881 1555 - 121768101 I e rheMac3.chr9 73833778 296 - 130959383 M a score=137501.000000 s hg38.chr10_KI270825v1_alt 58910 53 + 188315 gcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaactcg s panTro4.chr10 76429607 53 + 133524379 gcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaactcg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76099361 53 - 133410057 gcctataatcccagctactcaggaggctgagtcaggagaatcgcttgaactcg i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35040774 53 + 104879549 gcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaactcg i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73834074 53 - 130959383 gcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaactca i rheMac3.chr9 M 296 C 0 s macFas5.chr9 75395168 53 - 133195287 gcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaactcg i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73259921 53 - 125196307 gcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaactcg i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72091901 53 - 125710982 gcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaactcg i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27712476 0 + 88276631 C e mm10.chr14 24157100 4 + 124902244 I e calJac3.chr12 75548881 1555 - 121768101 I a score=179700.000000 s hg38.chr10_KI270825v1_alt 58963 103 + 188315 ggaggcagaagttgcagtgagccaagactgcaccactgtactccagcctgggtgacagagtgagactccatctta-ggggaaaaaaaaaaa----aa-aaaC---CAAACAG s panTro4.chr10 76429660 104 + 133524379 ggaggcagaagttgcagtgagccaagactgcaccactgtactccagcctgggtgacagagtgagactccaccttagggggaaaaaaaaaaa----aa-aaaC---CAAACAG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76099414 94 - 133410057 ggaggcagaagttgcagtgagccaagactgcaccactgtactccagcctgggtgacagagtgagactccatcttgggggggaaaaaaa------------------aaaCAG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35040827 108 + 104879549 ggaggcagaagttacagtgagccaagactgcaccactgtactccagcctgggtgacagagtgagactccgtcttggggggaaaaaaaaaaacaacaa-aaaa---aaaACAG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73834127 107 - 130959383 gggggcagaagttgcagtgagccaggactgcaccactgcactcaggcctgggtaacagagcgagactccgttttggagaaaaaaagaaaaa----ac-aaacacgaaaaCAG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75395221 107 - 133195287 gggggcagaagttgcagtgagccaggactgcaccactgcactcaggcctgggtaacagagcgagactccgttttggagaaaaaaagaaaaa----ac-aaacacgaaaaCAG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73259974 107 - 125196307 gggggcagcagttgcagtgagccaggactgcaccactgcactcaggcctgggtaacagagcgagactccgttttggggaaaacaaaaaaaa----ac-aaacacgaAAACAG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72091954 108 - 125710982 gggggcagaagttgcagtgagccaggactgcaccactgcactcaggcctgggtaacagagcgagactccgttttgggggaaaaaaaacaaa----acaaaaCACGAAAACAG i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27712476 21 + 88276631 GGAAGTGGAAAT---------------------------------GCACAGGTG---------------------------------------------------------- i canFam3.chr4 C 0 C 0 e mm10.chr14 24157100 4 + 124902244 I e calJac3.chr12 75548881 1555 - 121768101 I a score=1408379.000000 s hg38.chr10_KI270825v1_alt 59066 524 + 188315 TGGAACGCTTGAGCAGCTCTGCAAGCCAGTTTCTGCCCCCCAGGAACCAGCTCCTCCCACTGGGGCACAGGAAGGGACA--TGAATGGGAACGCTGCCCATTCATGTTGCCTTACACATCTTCAAGGAAGCAGCTT----------TACT-----------TCAGAAGAAAACCACAGAGAATGAA-----TCTTTCAC--AGAGATCACGTAAAAGGTGAGAATGCACAAGTGCATCAGGCACGTACA-------ACTCTGCCCGATGTGGAGGGCTGTGCGAAGCTCTTTGTCCCCAGTGAGCAGTGTGGACTG-------GTGCCTGAGATGCTTTCCACAGTCCCCAGCAATCTCACCCTTCTGGAAACTATGACAGCACACGC--AATCAGGCCG------TCCCGCTGCCCACT--CAGCCTCACACG---TGCCACCTCATCTCCCTA-GCCCTTC--AA------------GGCAAGTCTATGCC-CTAGGTTTTATTGTGTAAGTTCAAAAGCTTCTTATTAAAAAAGCAAACCAAATGCTATGCCCAATAAAGTGTTCCCCTCTT-GTGTCACACTCCCACT---ACCATG s panTro4.chr10 76429764 526 + 133524379 TGGAACGCTTGAGCAGCTCTGCAAGCCAGTTTCTGCCCCCCAGGAACCAGCTCCTCCCACTGGGGCACAGGAAGGGACA--TGAATGGGAACACTGCCCATTCATGTTGCCTTACACATCTGCAAGGAAGCAGCTT----------TACT-----------TCAGAAGAAAACCACAGAGAATGAA-----TCTTTCACATAGAGATCACGTAAAAGGTGAGAATGCACAAGTGCATCAGGCACGTACA-------ACTCTGCCTGACGTGCAGGGCTGTGTGAAGCTCTTTGTCCCCAGTGAGCAGTGTGGACTG-------GTGCCTGAGATGCTTTCCACAGTCCCCAGCAATCTCACCCTTCCAGAAACTATGACAGCACACGC--AATCAGGCCG------TCCCGCTGCCCACT--CAGCCTCACACG---TGCCACCTCATCTCCCTA-GCCCTTC--AA------------GGCAAGTCTATGCC-CTAGGTTTTATTGTGTAAGTTCAAAAGCTTCTTATTAAAAAAGCAAACCAAATGCTATGCCTAATAAAGTGTTCCCCTCTT-GTGTCACACTCCCACT---ACCATG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76099508 531 - 133410057 TGGAACGCTTGGGCAGCTCTGCAAGCCAGTTTCTGCCCCCCAGGAACCAGCTCCTCCCACTGGGACACAGGAGGAGACAGCTGAAGAGAAGAGATACCCATTCATGTTGCCTTACACATCTGCAAGGAAGCAGCTT----------TACT-----------TCAGAAGAAAACCACAGAGAATGAA-----TCTTTCACATAGAGATCACGTAAAAGGTGAGAATGCACACGTGCATCAGGCACGTACA-------ACTCTGCCCAATGTGCAGGGATGTGCGAAGCTCTTTGTCCCCAGTGAGCAGTGTGGACTG-------GTGCCTGAGATGCTTTCCACAGTCCCCAGCAATCTCACCCTTCTGGAAACTATGACAGCACACAC--AATCAGGCCG------TCCTGCTGCCCACT--CAGCCTTACACG---TGCCACCTCATCTCCCTA-GCCCTTC--AA------------GGCAAGTCTATGCC-CTAGGTTTTATTGTGTAAGTTCAAAAGCTTCTTATTAAAAAAGCAAACAAAATGCTATGCCCAATAAGGTGTTCCCCTCTT-GCGTCACACTCCCACTACCACCACG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35040935 540 + 104879549 TGGAACGCTTGGGCAGCTCTGCAAGCCAGTTTCTGCCCCTCAGGAACCAGCTCCTCCCACTGGGGCACAGAAGCGGACAGCTGGAGAGAAGTGCTGCCCATTCATGTTGCCTTACACATCTGCAAGGAAGCAGCTT----------TACT-----------TCAGAAGAAAACCACAGAGAATGAA-----TCTTTCACATAGAGATCACGTAAAAGGTGAGAATGCACACATGCATCAGGCACGTACA-------ACTCTGCCCAATGTGCAGGGCTGTGCGAAGCTCTTTGTCCCCAGTGAGCAGTGTGGACTG-------CTGCCTGAGATGCTTTCCACAGTCCCCAGCAATCTCACCCTTCTGGAAACTATGACAGCACACAC--AGTCAGGCCG------TCCTGCTGCCCACT--CAGCCTCACACG---TGCCACCTCATCTCCCTA-GCCCTTC--AAGTCTATGCCTAGGGCAAGTCTATGCC-CTAGGTTTTATTGTGTAAGTTCAAAAGCTTCTTATTAAAAAAGCAAACCAAATGCTATGCCCAATAAGGTGTTCCCCTCCT-GCGTCACACTCCCACT---ACTATG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73834234 526 - 130959383 TAGAGCGCTTGGGCAGCTCTGCAAGCCAGTTTCTGTCC--CAGGAACCAGCTCCTCCCACTGGGGCACAGGAGGGGACAGCTGGAGAGAAGTGTTGCCCATTCATGTTGCCTTACACATCTGCAAGGGAGCAGCTT----------TACT-----------TCAGAAGAAAACCACAGAGAATGAA-----TCTTTCACATAGAGATCATGTAAAAGGTGAGAATGCACACGTGTATCAGGCACATACA-------ACTCTGTCTGATGTGCAGGCCTGTGGGAAGCTCTCTGTCCCCAGTGAGCAGCGTGGACTG-------GTGCCTGAGATGCTTTCCACAGTCCCCAGCAATCTCACTCTTCTGGAAACTATGACAGCACACAC--AATCAGGCCG------TCCTGCTGCCCACT--CAGCCTCACATG---TGCCACCTCATCTCCCTA-GCCCTTC--AA------------GGCAAGTCCATGCC-CTAGGTTTTATTGTTTAAGTTCAAAAGCTTCTTATTAAAAAAGCAAACCAAATGCTATGCCCAAGAAGATGTTCCCCTCTT-GTGTCACACTCCCACT---ACCACG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75395328 526 - 133195287 TAGAGCGCTTGGGCAGCTCTGCAAGCCAGTTTCTGTCC--CAGGAACCAGCTCCTCCCACTGGGGCACAGGAGGGGACAGCTGGAGAGAAGTGTTGCCCATTCATGTTGCCTTACACATCTGCAAGGGAGCAGCTT----------TACT-----------TCAGAAGAAAACCACAGAGAATGAA-----TCTTTCACATAGAGATCATGTAAAAGGTGAGAATGCACACGTGTATCAGGCACATACA-------ACTCTGTCTGATGTGCAGGCCTGTGGGAAGCTCTCTGTCCCCGGTGAGCAGCGTGGACTG-------GTGCCTGAGATGCTTTCCACAGTCCCCAGCAATCTCACTCTTCTGGAAACTATGACAGCACACAC--AATCAGGCCG------TCCTGCTGCCCACT--CAGCCTCACATG---TGCCACCTCATCTCCCTA-GCCCTTC--AA------------GGCAAGTCCATGCC-CTAGGTTTTATTGTTTAAGTTCAAAAGCTTCTTATTAAAAAAGCAAACCAAATGCTATGCCCAAGAAGATGTTCCCCTCTT-GTGTCACACTCCCACT---ACCACG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73260081 516 - 125196307 TAGAGCGCTTGGGCAGCTCTGCAAGCCAGTTTCTGTCC--CAGGAACCAGCTCCTCCCACTGGGGCACAGGAGGGGACAGCTGGAGAGAAGTGTTGCCCATTCATGTTGCCTTACACATCTGCAAGGGAGCAGCTT----------TACT-----------TCAGAAGAAAACCACAGAGAATGAA-----TCTTTCACATAGAGATCATGTAAAAGGTGAGAATGCACACGTGTATCAGGCACATACA-------ACTCTGTCTGATGTGCAGGCCTGTGGGAAGCTCTCTGTCCCCAGTGAGCAGTGTGGACTG-------GTGCCTGAGATGCTTTCCACAGTCCCCAGCAATCTCACTCTTCTGGAAACTATGACAGCACACAC--AATAAGGCCG------TCCTGCTGCCCACT--CAGCCTCACATG---TGCCACCTCATCTCCCTA-GCCCTTC--AA------------GGCAAGTCCATGCC-CTAGGTTTTG----TTAAGTTCAAAAG---CTtattaaaaaagcaaaccaaatgcTATGTCC---AAGGTGTTCCCCTCTT-GTGTCACACTCCCACT---ACCACG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72092062 525 - 125710982 TAGAGCGCTTGGGCAGCTCTGCAAGCCAGTTTCTGTCC--CAGGAACCAGCTCCTCCCACTGGGGCACAGGAGGGGACAGCTGGAGAGAAGTGTTGCCCATTCATGTTGCCTTACACATCTGTAAGGG-GCAGCTC----------TACT-----------TCAGAAGAAAACCACAGAGAATGAA-----TCTTTCACATAGAGATCATGTAAAAGGTGAGAATGCACACGTGTATCAGGCACATACA-------ACTCTGTCTGATGTGCAGGCCTGTAGGAAGCGCTCTGTCCCCAGTAAGCAGTGTGGACTG-------GTGCCTGAGATGCTTTCCACAGTCCCCAGCAATCTCACTCTTCTGGAAACTATGACAGCACACAC--AATCAGGCCG------TCCTGCTGCCCACT--CAGCCTCACATG---TGCCACCTCATCTCCCTA-GCCCTTC--AA------------GACAAGTCCATGCC-CTAGGTTTTATTGTTTAAGTTCAAAAGCATCTTATTAAAAAAGCAAACCAAATGCTATGCCCAAGAAGGTGTTCCCCTCTT-ATGTCACACTCCCACT---ACCACG i chlSab2.chr9 C 0 C 0 s mm10.chr14 24157104 466 + 124902244 TGGCACGTTTGG----------AAGCTGACTTCTGCC---CATGCACCAGTTCTTCCCACTCAGGCTAAGGAGTGACCAGAGGGAG-GAGACACTGTCCATTCACACTGCCTGACACCCGTGCAGACAAAGGGTTT----------CCCCTCCAGACCCCGTCAGAAGACAAACGTAGGGAAAGAATATG-TCTTTCAAATAAA---------------GAGATTG------------AGGGA-----------------TGGCGGGTGGGAAGGCGTGTCAGAGCCTGTAAGT--GCAGTGAGCAGCGTGCACTGTGGCACCATGCCCTAGGAGTTC----CAGCTCAAAGCGGTTTC-CCCTTCTGGAA-----GTGAGCACACAC--AGCTCCTCTG------CCCAGCTAC-------CAGCTTCTCATGGATGGATCACTCATCTCCACA-CATGTTCTGGG------------GGCAGATCTGTCAC-TTA-------------AAGCTGAAAAACTTC---TTTAGAAAGCAAACCAAACATTATGTTCAGGCAAGTGTTCTCTTA---GTGCCAT-TTCCCACA-----CATG i mm10.chr14 I 4 C 0 s canFam3.chr4 27712497 524 + 88276631 -----------------TCTGCAAGCC----TGTGCCC--TAAGCACTAGCTC-TCCCACTGGGACACGTGACGGGACAGTCAGGGAGG-TCACTGCCCATTCATGTTGCCTTACATACCTGGAAGGGAAGAAATTCCTTCAAAACTACT-----------CTGGAAGAAAACCACAGAGAAAGAACCTGTTCTCTCAAGTAAATTATGCACAGGAGGT-AGGATGCATGAGGCCACCAGGCACATATATAGAACTGCTCCTCCAAACTTGCATGGCTGTGTGAGGGTCTTTGCCTGCAGAGAGTAGCACGGATTT-------GT-------------TCTCCAGCTCAGAGCAATTTCTCCCACCTGGAAATGACTACAGCACCCACAGAAACAAGCCAGCCGCCCCCTGCTACCGGCCAACAGAGTCACAGG---TGCTATCGCGGCTCCCCACATCCTGC--CA------------GGCAGGTCCAGGTCACCTGCTTTTGTTGTACAAGTTCAAATGCTTCTTGATGAGAAAGCAAATCAGACACCACACCCGAGAAAGTGTTCCTGTCTTGGCATCATATGCCCATT---GACATG i canFam3.chr4 C 0 C 0 e calJac3.chr12 75548881 1555 - 121768101 I a score=2500301.000000 s hg38.chr10_KI270825v1_alt 59590 610 + 188315 ---CACTTCCACGCCACTTACCTACCTCCT-AGCTGGGCCACTTCCCACTTGAGTC------------------------CA---------ACAGCAAA-----------------GGCAAAGGCAC---CAGGCTAAACAGGGGCCT-GGGACACTGGTGCAGGGCCACTTAGCAGCCCTCCTTCGGCCAACTGCCCCTCTCTAGGCCT-CCCCTCCCCACACCCTGGGGCTCAGCTATACCTCCAGGAACTGAGCAGGAATCACTACTGGAGCAAGCTTCGGCCGAAAACTGGGAGCAGATTTTGGCCGGCGACGCTTCTGCCCCAGCTCATCCACCTTCTGGGAGGTGAGGTCCTCATCACAGGATTTCTTGGCCGGCAG--GTGGGAGGAGTCCCCATCTCCTTCAGGGTAGTAGCTGGAAGCAATGCGGACCCTGGCCTTGCGAGGGGGTGATGCGTGCATGGGCTCCCCGGGGTCCACGTCAGGGGGCAGGGCGCTCGGGGGACTAGTGGATGGGGAGCTGCCCACCAGAGTGGCTTCTGACTCGGAGCTAGTCTCCAGCCTGTGCTGGAACTTAATGGAGTCGCTCCTTCTGGGAGGTTTTGGGGGTGTCAGAGGCCCCGCCCTCT-TGGAGGGCTGGGGAGAGTGAGCAGGCCCAGGACCTGGA s panTro4.chr10 76430290 610 + 133524379 ---CACTTCCACGCCACTTACCTACCTCCT-AGCTGGGCCACTTCCCACTTGAGTC------------------------CA---------ACAGCAAA-----------------GGCAAAGGCAC---CAGGCTAAACAGGAGCCT-GGGACACTGGTGCAGGGCCACTTAGCAGCCCTCCTTTGGCCAACTGCCCCTCTCTAGGCCT-CCCCTCCCCACACCCTGGGGCTCAGCTATACCTCCAGGAACTGAGCAGGAATCACTACTGGAGCAAGCTTCGGCCGAAAACTGGGAGCAGATTTTGGCCGGCGACGCTTCTGCCCCAGCTCATCCACCTTCTGGGAGGTGAGGTCCTCATCACAGGATTTCTTGGCCGGCAG--GTGGGAGGAGTCCCCATCTCCTTCAGGGTAGTAGCTGGAAGCAATGCGGACCCTGGCCTTGCGAGGGGGTGATGCGTGCATGGGCTCCCCGGGGTCCACGTCAGGGGGCAGGGCGCTCGGGGGACTAGTGGATGGGGAGCTGCCCACCAGAGTGGCTTCTGACTCGGAGCTAGTCTCCAGCCTGTGCTGGAACTTAATGGAGTCGCTCCTTCTGGGAGGTTTTGGGGGTGTCAGAGGCCCCGCCCTCT-TGGAGGGCTGGGGAGAGTGAGCAGGCCCAGGACCTGGA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76100039 610 - 133410057 ---CACTTCCACGCCACTTACCTACCTCCT-AGCTGGGCCACTTCCCACTTGAGTC------------------------CA---------ACAGCAAA-----------------GGCAAAGGCAC---CAGGCTAAACAGGAGCCT-GGGACACTGGTGCAGGGCCACTTAGCAGCCGTCCTTTGGCCAACTGCCCCCCTCTAGGCCT-CCCCTCCCCACACCCTGGGGCTCAGCTATACCTCCAGGAACTGAGCAGGAATCACTACTGGAGCAAGCTTAGGCCGAAAACTGGGAGCAGATTTTGGCCGGCGACGCTTCTGCCCCAGCTCGTCCACCTTCTGAGAGGTGAGGTCCTCATCACAGGATTTCTTGGCCGGCAG--GTGGGAGGAGTCCCCATCTCCTTCAGGGTAGTAGCTGGAAGCAATGCGGACCCTGGCCTTTCGAGGGGGTGATGCGTGCATGGGCTCCCCGGGGTCCACGTCGGGGGGCAGGGCGCTTGGGGGACTAGTGGATGGGGAGCTGCCAACCAGAGTGGCTTCTGACTCGGAGCTAGTCTCCAGCCTGTGCTGGAACTTAATGGAGTCGCTCCTTCTGGGAGGTTTTGGGGGTGTCAGAGGCCCCGCCCTCT-TGGAGGGCTGGGGAGAGTGAGCAGGCCCAGGACCTGGA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35041475 610 + 104879549 ---CACTTCCATGCCACTTACCTACCTCCT-AGCTGGGCCACTTCCCACTTGAGTC------------------------CA---------ATAGCAAA-----------------GGCAAAGGCAC---CAGGCTAAACAGGAGCCT-GGGACACTGGTGCAGGGCCACTTAGCAGCCCTCCTTCGGCCAACTGCCTCCCTCTAGGCCT-CCCCTCCCCACACCCTGGGGCTCAGCTATACCTCCAGGAACTGAGCAGGAATCACTACTGGAGCAAGCTTAGGCCGAAAACTGGGAGCAGATTTTGGCCGGCGACGCTTCTGCCCCAGCTCGTCCACCTTCTGGGAGGTGAGGTCCTCATCACAGGATTTCTTGGCCGGCAG--GTGGGAGGAGTCCCCATCTCCTTCAGGGTAGTAGCTGGAAGCAATGCGGACCCTGGCCTTGCGAGGGGGTGATGCGTGCATGGGCTCCCCAGGGTCCACGTCGGGGGGCAGGGCGCTCGGGGGACTAGTGGATGGGGAGCTGCCCACCAGAGTGGCTTCTGACTCAGAGCTAGTCTCCAGCCTGTGCTGGAACTTAATGGAGTCGCTCCTTCTGGGAGGTTTTGGGGGTGTCAGAGGCCCCGCCCTCT-TGGAGAGCTGAGGAGAGTGAGCAGGCCCAGGACCTGGA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73834760 609 - 130959383 ---CATTTCCACTCCACTTACCTACCTCCT-AGCTGGGCCACTTCCCACTTGAGTC------------------------CA---------ACAGCAAA-----------------GGCAAAGGTAC---CAGGCTAAACAGGAGCCT-GGAACACTGGTGCAGGGCCACTCAGCAGCCCTCCTTTGGCCAACTGTCCCC--CCAGGCCTCCCCCTCCCTGCACCCTGGGGCTCAGCACTACCTCCAGGAACTGAGCAGGAATCACTACTGGAGCAAGCTTAGGCCGAAAACTGGGAGCAGATTTTGGCCGGCGACGCTTCTGCCCCAGCTCGTCCACCTTCTGGGAGGTGAGGTCCTCATCACAGGATTTCTTGGCCGGCAG--GTAGGAGGAGTCCCCATCTCCTTCTGGGTAGTAGCTGGAAGCGATGCGGACCCTGGCCTTGCGAGGGGGTGATGCGTGCATGGGCTCCCCGGGGTCCACATCGGGAGGCAGGGCACTTGGGGGACTAGTGGATGGGGAGCTGCCCACCAGAGTGGCCTCTGACTCGGAGCTAGTCTCCAGCCTGTGCTGGAACTTAATGGAGTCGCTCCTTCTGGGAGGTTTTGGGGGTGTCAGAGGCCCTGCCCTCT-TGGAGGGCTGGGGAGAGAGAGCAGGCCCAGGACCTGGC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75395854 609 - 133195287 ---CATTTCCACTCCACTTACCTACCTCCT-AGCTGGGCCACTTCCCACTTGAGTC------------------------CA---------ACAGCAAA-----------------GGCAAAGGTAC---CAGGCTAAACAGGAGCCT-GGAACACTGGTGCAGGGCCACTCAGCAGCCCTCCTTTGGCCAACTGTCCCC--CCAGGCCTCCCCCTCCCTGCACCCTGGGGCTCAGCACTACCTCCAGGAACTGAGCAGGAATCACTACTGGAGCAAGCTTAGGCCGAAAACTGGGAGCAGATTTTGGCCGGCGACGCTTCTGCCCCAGCTCGTCCACCTTCTGGGAGGTGAGGTCCTCATCACAGGATTTCTTGGCCGGCAG--GTAGGAGGAGTCCCCATCTCCTTCTGGGTAGTAGCTGGAAGCGATGCGGACCCTGGCCTTGCGAGGGGGTGATGCGTGCATGGGCTCCCCGGGGTCCACATCGGGGGGCAGGGCACTTGGGGGACTAGTGGATGGGGAGCTGCCCACCAGAGTGGCCTCTGACTCGGAGCTAGTCTCCAGCCTGTGCTGGAACTTAATGGAGTCGCTCCTTCTGGGAGGTTTTGGGGGTGTCAGAGGCCCTGCCCTCT-TGGAGGGCTGGGGAGAGAGAGCAGGCCCAGGACCTGGC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73260597 609 - 125196307 ---CATTTCCACTCCACTTACCTACCTCCT-AGCTGGGCCACTTCCCACTTGAGTC------------------------CA---------ACAGCAAA-----------------GGCAAAGGTAC---CAGGCTAAACAGGAGCCT-GGAACACTGGTGCAGGGCCACTCAGCAGCCCTCCTTTGGCCAACTGCTCCC--CCAGGCCTCCCCCTCCCTGCACCCTGGGGCTCAGCACTACCTCCAGGAACTGAGCAGGAATCACTACTGGAGCAAGCTTAGGCCGAAAACTGGGAGCAGATTTTGGCCGGCGACGCTTCTGCCCCAGCTCGTCCACCTTCTGGGAGGTGAGGTCCTCATCACAGGATTTCTTGGCCGGCAG--GTAGGAGgagtctccatctccttcagggTAGTAGCTGGAAGCGATGCGGACCCTGGCCTTGCGAGGGGGTGATGCGTGCATGGGCTCCCCGGGGTCCACATCGGGGGGCAGGGCACTTGGGGGACTAGTGGATGGGGAGCTGCCCACCAGAGTGGCCTCTGACTCGGAGCTAGTCTCTAGCCTGTGCTGGAACTTAATGGAGTCGCTCCTTCTGGGAGGTTTTGGGGGTGTCAGAGGCCCTGCCCTCT-TGGAGGGCTGGGGAGAGTGAGCAGGCCCAGGACCTGGC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72092587 609 - 125710982 ---CATTTCCACTTCACTTACCTACCTCCT-AGCTGGGCCACTTCCCACTTGAGTC------------------------CA---------ACAGCAAA-----------------GGCAAAGGTAC---CAGGCTAAACAGGAGCCT-GGAACACTGGTGCAGGGCCACTCAGCAGCCCTCCTTTGGCCAACTGCCCCC--CCAGGCCTCCCCCTCCCTGCACCCTGGGGCTCAGCACTACCTCCAGGAACTGAGCAGGAATCACTACTGGAGCAAGCTTAGGCCGAAAACTGGGAGCAGATTTTGGCCGGCGACGCTTCTGCCCCAGCTCGTCCACCTTCTGGGAGGTGAGGTCCTCATCACAGGATTTCTTGGCCGGCAG--GTAGGAGGAGTCCCCATCTCCTTCAGGGTAGTAGCTGGAAGCGATGCGGACCCTGGCCTTGCGAGGGGGTGATGCGTGCATGGGCTCCCCGGGGTCCACATCGGGGGGCAGGGCACTTGGGGGACTAGTGGATGGGGAGCTGCCCACCAGAGTGGCCTCTGACTCGGAGCTAGTCTCCAGCCTGTGCTGGAACTTAATGGAGTCGCTCCTTCTGGGAGGTTTTGGGGGTGTCAGAGGCCCTGCCCTCT-TGGAGGGCTGGGGAGAGTGAGCAGGCCCAGGACCTGGC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75550436 629 - 121768101 ---CACTCCCACACCACGTACCTACCTCCT-AGCTGGGCTACTTCCCACAGGCATCCCCCTGCTACTCCTTCCTCTTCCTCA---------ACTCCAAG-----------------AGCAAAGGCGC---CAGGTTAAACAGGAGCCTGGGGACACTGGTGCAGGGCCAATCAGCAGCCCTCCCTCAGCCAACTGCCCCACTCCAGGCTT-CCCCTCACCGCACCCTGGGGCTCAGCTCTACCTCCAGGAACTGAGCAGGAATCACTACTGGAGCGAGCTTAGGCCGAAAACTGGGAGCAGACTTTGGCCGGCGACGCTTCTGCCCTAGTTCGTCCGCCTTCTGGGAGGTGAGGTCCTCATCACAGGACTTCTTGGGTGGCAGAAAAAGGAGGAGTCTCCATCT-CTTCGGGGTAGTAGCTGGAAGCGATGCGGACCCTGGCCTTGCGAGGGGGTGATGCGTGCATGGGCTCCCCAGGGTCCCTGTCA---GGCAGGGCACTTGGGGGGCTAGTGGAT-GAGAGCTGCTCACCAGAGTGGC-TCTGACTCAGAGCTGGTCTCCAG-CTGTGCTGGAACTTAATGGAGTCACT-CTCCTGAGAGGTATTGGGGGTGTCAGAGGCATCGCATCCTCTGGAGGACTG-GGAGAGTGAGCAGGCCCAGAGCCTGAA i calJac3.chr12 I 1555 I 1297 s mm10.chr14 24157570 591 + 124902244 ------TCCCATGAC-CTTCCCCATCTCCT-AGAGGGGAC-TTGCTCACTGGCATC------------------------CACGAAGGCACATGCCAAC-----------------AACAAAGGCGCTCGCCAGCTCTGCACAAGCCC-GTGAAGCTGTGG--AGGCCACTTTGCAGGCCCCCATC--CCAGCCGCTCCAGCCCCAGCCC-AACCTC----------------------TACCTCCAGGCACTGAGCAGGGATCACCACTGGAGAGATCTTGGGCCGAAAACTTGGGGCAGACTTTGGCCGGCGCCGTTTCTGCCCCAGCTCATCGACTTTCTGGGAGGTGAGGTCTTCATCACAAGGCTTCTTGGCGGGCAG--GTAGGAGGTGTCTCCGTCCCCTTCAGAGTGGTAGCTGGAGGCAATGCGGACCCTGGCCTTCCGAGGAGGTGAAGCATGCGTGGGCTCACTGGGATCCATGCTGGGGGGTGGGGCACTGGGAGGGCTGGTGGAAGGTGAGCTGCCCACCAAAGTGGCTTCTGACTCAGAACTGGTCTCCAGCCTGTGTTGGAACTTGATAGAGTCACTTCTCCTGGGGGGCTTTGGGGGTGTCAGAGATCCTACCCTCT-TGGAGGGCTGGGGGGAATGAGTAAGCCCAGGGCCTGGA i mm10.chr14 C 0 C 0 s canFam3.chr4 27713021 587 + 88276631 TTTACCCCCCACATCCCTTTCCAATCTCCTGAGGACGGCTCCTTCCTGCCGGCATC------------------------CA---------CCAACCAGCCCGCTCCCCTTTCCTTGGTGGGTGCTC---AGGGCTCAGCACCAGGCTGGGGACACCAGCTCAGGA---------------------------------------------CCCCTCCCCACGCTCCCGCCCCCA-CCCTACCTCCAGGAACTGAGCAGGAATCACTACTGGAGCCAGCTTGGGCCGAAAGCTAGGAGCAGACTTTGGACGACGGCGCTTCTGCCCCAGCTCGTCCATCTTCTGGGAGGTGAGGTCCCCGTCACAGGACTTCTTGGCGGGCAG--GTAGGAGGAGTCTCCATCCCCTTCAGGGTAGTAGCTGGAAGCAATGCGGACCCTGCCCTTGCGAGGGGGTGAGGTGTGCGTGGGTTCCCCAGGATCCACGTCAGGGGGCAGTGCGCTCGGGGGGCTGGTGGACGGGGAGCTGCCCACCAGAGTGGCCTCGGACTCGGAACTGGTTTCCAGTCTGTGCTGAAATTTAATGGAGTCGCTCCTCCTGGGAGGTTTTGGGGGCGTCAGAGGCCCCACCCTTT-TGGAGGGCTGGGGGGAGTGAGCAGACCCAGGGCCAGGG i canFam3.chr4 C 0 C 0 a score=3079895.000000 s hg38.chr10_KI270825v1_alt 60200 869 + 188315 AGCAGGTAGTCTATTTTGGGGGGTGTCTGGGGGCGTTTGAAAGTGTTAGGGTCAAAGATGGACTTTCTTTGCTTTGGCTTTTTATAAACAGAGAGCTTCTCAGGCACTGCCGTGGAGCTGAGCATGGCCTTGGGCCAGGTCCCGCCGCTGTTGGAGCCTTCAGAGTCTGCCTTGTCCAGGGAGGCCTCCCCAACCCCACAGGGGCCCACCTCGGTCTCAAAGGGCAGCAGTGGCCGCCGGCCACGCACGTCCACCAGCCCAAAGCCACGGTCCCCAGAGGCATCTGAGCGGAAGGAGCTCAGGCTACGCTCAGAGGCACTGGGACAGGCCTGGGGGCAGACCTGCAAGGGTCCCCCAGGGAATGGCTTATGCAGAAAGGAGCTGCTGCCTCCTGGGGGGCCTGGCTCCTTCCTGTCTTCCAGCCTGTCCGTGTAGAAGATGTCTGTCTGCGTGGAGTTATTGTGCTGTATCAAGTTCcgtttgttatgagcctggacctccgggccatgggctcgaaaactcagcatcttatcagagtctttgatattttcaAAAATGTTCTGGCCACTCCACGAGGAGCTCTGAGGGAATACCTAGGCAGGGATTGCagaggagtgagagagagagtgagaTG-GCA-GGACTTGGAGCTGCCACTGAAAACCATCCCCAGAGGTAAAGCAATGGTCAGGAATGGGCCACCTGCCCCTTAAAAAAG---AGACAGATAGACAGAGAT-------GCACACACACATGAACACATATGCTTCTCCCTAA-TGGATAAGTTTTCTCATGGCTCTGGTCACTCTGAACTCAAAGAAGAGTCAAAGTTTTCTTAACTTTGAACACTT-TCTGAAATTATCTGggccgggcacagtg s panTro4.chr10 76430900 869 + 133524379 AGCAGGTAGTCTATTTTGGGGGGTGTCTGGGGGCGTTTGAAAGTGTTAGGGTCAAAGATGGACTTTCTTTGCTTTGGCTTTTTATAAACAGAGAGCTTCTCAGGCACTGCCGTGGAGCTGAGCATGGCCTTGGGCCAGGTCCCGCCGCTGTTGGAGCCTTCAGAGTCTGCCTTGTCCAGGGAGGCCTCCCCAACCCCACAGGGGCCCACCTCAGTCTCAAAGGGCAGCAGTGGCCGCCGGCCACGCACGTCCACCAGCCCAAAGCCACGGTCCCCAGAGGCATCTGAGCGGAAGGAGCTCAGGCTACGCTCAGAGGCACTGGGACAGGCCTGGGGGCAGACCTGCAAGGGTCCCCCAGGGAATGGCTTATGCAGAAAGGAGCTGCTGCCTCCTGGGGGGCCTGGCTCCTTCCTGTCTTCCAGCCTGTCCGTGTAGAAGATGTCTGTCTGCGTGGAGTTATTGTGCTGTATCAAGTTCCGTTTGTTATGAGCCTGGACCTCCGGGCCATGGGCTCGAAAACTCAGCATCTTATCAGAGTCTTTGATATTTTCAAAAATGTTCTGGCCACTCCACGAGGAGCTCTGAGGGAATACCTAGGCAGGGATTGCAGAGGAGTGAGAGAGAGAGTGAGATG-GCA-GGACTTGGAGCTGCCATTGACAACCATCCCCAGAGGTAAAGCAATGGTCAGGAATGGGCCACCTGCCCCTTAAAAAAG---AGACAGATAGACAGAGAT-------GCACACACACATGAACACATATGCTTCTCCCTAA-TGGATAAGTTTTCTCATGGCTCTGGTCACTCTGAACTCAAAGAAGAGTCAAAGTTTTCTTAACTTTGAACACTT-TCTGAAATCATCTGggccgggcacagtg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76100649 869 - 133410057 AGCAGGTAGTCTATTTTGGGGGGTGTCTGGGGGCGTTTGAAAGTGTTAGGGTCAAAGATGGACTTTCTTTGCTTTGGCTTTTTATAAACGGAGAGCTTCTCAGGCACTGCCGTGGAGCTGAGCATGGCCTTGGGCCAGGTCCCGCCGCTGTTGGAGCCTTCAGAGTCTGCCTTGTCCAGGGAGGCCTCCCCAACCCCACAGGGGCCCGCCTCGGTCTCAAAGGGCAGCAGTGGCCGCCGGCCACGCACGTCCACCAGCCCAAAGCCACGGTCCCCAGAGGCATCTGCGCGGAAGGAGCTCAGGCTACGCTCAGAGGCACTGGGACAGGCCTGGGGGCAGACCTGCAAGGGTCCCCCAGGGAATGGCTTGTGCAGAAAGGAGCTGCTGCCTCCTGGGGGGCCTGGCTCCTTCCTGTCTTCCAGCCTGTCCGTGTAGAAGATGTCTGTCTGCGTGGAGTTATTGTGCTGTATCAAGTTCCGTTTGTTATGAGCCTGGACCTCCAGGCCATGGGCTCGAAAACTCAGCATCTTATCAGAGTCTTTGATATTTTCAAAAATGTTCTGGCCACTCCACGAGGAGCTCTGAGGGAACACCTAGGCAGGGATTGCAGAGGAGTGAGAGAGAGAGTGAGATG-GCA-GGACTTGGAGCTGCCACTGAAAACCATCCCCAGAGGTAAAGCAATGGTCAGGAATGGGCCACCTGCCCCTTAAAAAAG---AGACAGATAGACAGAGAT-------GCACACACACACAAACACATATGCTTCTCCCTAA-TGGATAAGTTTTCTCATGGCCCTGGTCACTCTGAACTCAAAGAAGAGTCAAAGTTTTCTTAACTTTGAACACTT-TCTGAAATCACCTGggccaggcacagtg i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35042085 865 + 104879549 AGCAGGTAGTCTATTTTGGGGGGTGTCTGGGGGCGTTTGAAAGTGTTAGGGTCAAAGATGGACTTTCTTTGCTTTGGCTTTTTATAAACAGAGAGCTTCTCAGGCACTGCCGTGGAGCTGAGCATGGCCTTGGGCCAGGTCCCGCCGCTGTTGGAGCCTTCAGAGTCTGCCTTGTCCAAGGAGGCCTCCCCAACCCCACAGGGGCCCGCCTCGGTCTCAAAGGGCAGCAGTGGCCGCCGGCCACGCACGTCCACCAGCCCAAAGCCACGGTCCCCAGAGGCATCTGAGCGGAAGGAGCTCAGGCTACGCTCAGAGGCACTGGGACAGGCCTGGGGGCAGACCTGCAAGGGTCCCCCAGGGAATGGCTTGTGCAGAAAGGAGCTGCTGCCTCCTGGGGGGCCTGGCTCCTTCCTGTCTTCCAGCCTGTCCGTGTAGAAGATGTCTGTCTGCGTGGAGTTATTGTGCTGTATCAAGTTCcgtttgttatgagcctggacctccgggccatgggctcgaaaactcagcatcttatcagagtctttgatattttcaAAAATGTTCTGGCCACTCCACGAGGAGCTCTGAGGGAACACCTAGGCAGGGATTGCAGAGGAGTGAGAGAGAGAATGAGATG-GCA-GGACTTGGAGCTGCCACTGAAAACCGTCCCCAGAGGTAAAGCAATGGTCAGGAATGGGCCACCTGCCCCTTAAAAAAG---AGAC----AGACAGAGAT-------GCACACACACACAAACACATATGCTTCTCCCTAA-TGGAGAAGTTTTCTCATGGCCCTGGTCACTCTGAACTCAAAGAAGAGTCAAAGTTTTCTTAACTTTGAACACTT-TCCGAAATCACCTGggccaggcatggtg i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73835369 869 - 130959383 AGCAGGTAATCTATTTTGGGGGGTGTCTGGGGGCGTTTGAAAGTGTTAGGGTCAAAGATGGACTTTCTTTGCTTTGGCTTCTTATAAACGGAGAGCTTCTCAGGCGCTGCCGTGGAGCTGAGCACGGCCTTGGGCCAGGTCCCGCCGCTGTTGGAGCCTTCAGAGTCCACCTTGTCCAGGGGGGCCTCCCCAACCCCACAGGGGCCCACCTCTGTCTCAAAGGGCAGCAGTGGCCGCCGGCTACGCACATCCACCAGCCCAAAGCCACGGTCCCCAGAGGCATCTGAGCGGAAGGAGCTCAGGCTACGCTCAGAGGCACTGGGACAGGCCTGGGGGCAGACCTGCAAGGGTCCCCCAGGGAATGGCTTGTGCAGAAAGGAGCTGCTGCCTCCTGGGGGGCCTGGCTCCTTCCTGTCTTCCAGCCTGTCCGTGTAGAAGATGTCTGTCTGCGTGGAGTTATTGTGCTGTATCAAATTCCGTTTGTTATGAGCCTGGACTTCCGGGCCATGGGCTCGAAAACTCAGCATCTTATCAGAGTCTTTGATATTTTCAAAAATGTTCTGGCCACTCCACGAGGAGCTCTGAGGGAACACCTAGGCAGGGATTGCAGAGGAGTGAGAGAGAAAGTGAGATG-GCA-GGACTTGGAGCTGCCACTGAAAACCGTTCCCACAGGTAAAGCAATGGTCAGGAATGGGCCACCTGCCCCTTAAAAAAG---AGACAGGCAGACAGAGAC-------GCACATACACACAAACACATGTGCTTCTTCCTAA-GGGAGAAGTTTTCTCATGGCCCTGGTCACTCTGAACTCAAACAAGAGTCAAAGTTTTATTAACTTTGAACACTT-TCTGAAATCACCTGggccgggcacggtg i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75396463 869 - 133195287 AGCAGGTAATCTATTTTGGGGGGTGTCTGGGGGCGTTTGAAAGTGTTAGGGTCAAAGATGGACTTTCTTTGCTTTGGCTTCTTATAAACGGAGAGCTTCTCAGGCGCTGCCGTGGAGCTGAGCACGGCCTTGGGCCAGGTCCCGCCGCTGTTGGAGCCTTCAGAGTCCACCTTGTCCAGGGGGGCCTCCCCAACCCCACAGGGGCCCACCTCTGTCTCAAAGGGCAGCAGTGGCCGCCGGCTACGCACATCCACCAGCCCAAAGCCACGGTCCCCAGAGGCATCTGAGCGGAAGGAGCTCAGGCTACGCTCAGAGGCACTGGGACAGGCCTGGGGGCAGACCTGCAAGGGTCCCCCAGGGAATGGCTTGTGCAGAAAGGAGCTGCTGCCTCCTGGGGGGCCTGGCTCCTTCCTGTCTTCCAGCCTGTCCGTGTAGAAGATGTCTGTCTGCGTGGAGTTATTGTGCTGTATCAAATTCcgtttgttatgagcctggacttccgggccatgggctcgaaaactcagcatcttatcagagtctttgatattttcaAAAATGTTCTGGCCACTCCACGAGGAGCTCTGAGGGAACACCTAGGCAGGGATTGCAGAGGAGTGAGAGAGAAAGTGAGATG-GCA-GGACTTGGAGCTGCCACTGAAAACCGTCCCCACAGGTAAAGCAATGGTCAGGAATGGGCCACCTGCCCCTTAAAAAAG---AGACAGGCAGACAGAGAC-------GCACATACACACAAACACATGTGCTTCTTCCTAA-TGGAGAAGTTTTCTCATGGCCCTGGTCACTCTGAACTCAAAGAAGAGTCAAAGTTTTATTAACTTTGAACACTT-TCTGAAATCACCTGggccgggcacggtg i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73261206 869 - 125196307 AGCAGGTAATCTATTTTGGGGGGTGTCTGGGGGCGTTTGAAAGTGTTAGGGTCAAAGATGGACTTTCTTTGCTTTGGCTTCTTATAAACGGAGAGCTTCTCAGGCGCTGCCGTGGAGCTGAGCACGGCCTTGGGCCAGGTCCCGCCACTGTTGGAGCCTTCAGAGTTCACCTTGTCCAGGGGGGCCTCCCCAACCCCACAGGGGCCCACCTCTGTCTCAAAGGGCAGCAGTGGCTGCCGGCTACGCACATCCACCAGCCCAAAGCCACGGTCCCCAGAGGCATCTGAGCGGAAGGAGCTCAGGCTACGCTCAGAGGCACTGGGACAGGCCTGGGGGCAGACCTGCAAGGGTCCCCCAGGGAATGGCTTGTGCAGAAAGGAGCTGCTGCCTCCTGGGGGGCCTGGCTCCTTCCTGTCTTCCAGCCTGTCCGTGTAGAAGATGTCTGTCTGCGTGGAGTTATTGTGCTGTATCAAATTCCGTTTGTTATGAGCCTGGACTTCCGGGCCATGGGCTCGAAAACTCAGCATCTTATCAGAGtctttgatattttcaaaaatgttctgGCCACTCCACGAGGAGCTCTGAGGGAACACCTAGGCAGGGATTGCagaggagtgagagagaaagtgagatg-gCA-GGACTTGGAGCTGCCACTGAAAACCATCCCCACAGGTAAAGCAATGGTCAGGAATGGGCCACCTGCCCCTtaaaaaag---agacagacagacagagac-------gcacatacacacaaacacatgtgctTCTTCCTAA-TGGAGAAGTTTTCTCATGGCCCTGGTCACTCTGAACTCAAAGAAGAGTCAAAGTTTTATTAACTTTGAACACTT-TCTGAAATCacctgggccgggcacggtg i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72093196 869 - 125710982 AGCAGGTAATCTATTTTGGGGGGTGTCTGGGGACGTTTGAAAGTGTTAGGGTCAAAGATGGACTTTCTTTGCTTTGGCTTCTTATAAACGGAGAGCTTCTCAGGTGCTGCCGTGGAGCTGAGCACGGCCTTGGGCCAGGTCCCGCCGCTGTTGGAGCCTTCAGAGTCCACCTTGTCCAGGGGGGCCTCCCCAACCCCACAGGGGCCCACCTCTGTCTCAAAGGGCAGCAGTGGCCGCCGGCTACGCACATCCACCAGCCCAAAGCCACGGTCCCCAGAGGCATCTGAGCGGAAGGAGCTCAGGCTACGCTCAGAGGCACTGGGACAGGCCTGGGGGCAGACTTGCAAGGGTCCCCCAGGGAATGGCTTGTGCAGAAAGGAGCTGCTGCCTCCTGGGGGGCCTGGCTCCTTCCTGTCTTCCAGCCTGTCCGTGTAGAAGATGTCTGTCTGCGTGGAGTTATTGTGCTGTATCAAATTCcgtttgttatgagcctggacttccgggccatgggctcgaaaactcagcatcttatcagagtctttgatattttcaAAAATGTTCTGGCCACTCCACGAGGCGCTCTGAGGGAACACCTAGGCAGGGATTGCAGAGTAGTGAGAGAGAAAGTGAGATG-GCA-GGACTTAGAGCTGCCACTGAAAACCGTCCCCACAGGTAAAGCAATGGTCAGGAATGGGCCACCTGCCCCTTAAAAAAG---agacagacagacagagat-------gcacatacatacaaacaCATGTGCTTCTTCCTAA-TGGAGAAGTTTTCTCATGGCCCTGGTCACTCTGAACTCAAAGAAGAGTCAAAGTTTTATTAACTTTGAACACTT-TCTGAAATCACCTGggccgggcacggtg i chlSab2.chr9 C 0 C 0 s mm10.chr14 24158161 850 + 124902244 AGCAGGTAGTCTATTTTGGGGGGTGTCTGTGGGCGCTTGAAAGTATTTGGGTCAAAGATGGACTTCCTTTGTTTGGGTTTCTTATACACAGAGAGTTTCTCAGGCCCTGATGTGGAGCCAAGCACAGCCTTGGGCCAGGTCCCACCACTATTGGAGCCCTCTGGATCTATCTTGTCCAGGGGAACCTCTACTGCCCCACAGGGGCCCACCTCAGTCTCAAAAGACAGCAGTGGCCGCTGGCTCCGCATATCCACCAGCCCATAGCCACGTTCTGCAGAGGTATCAGAGCGGAATGAGTTCAGACTACGCTCAGAGGTGCTAGGACAGGCCTGAGGGGAGACTGGAGACGAGGATCCAGAGAAGGGCTTGTGGAGAAAAGAACTGCTGCCTCCAGAATGTCCCAGCTCCTTCCTGTCCTCCAGCCGATCCGTGTAGAAAATGTCTGTCTGCGTGGAATTATTGTGCTGTAACAAGTTCCGTTTGTTATGCGCCTGGACCTCTGGGCCGTGGGCTCGGCAACTCAGCATCCTATCTGAGTCCTTGATATTTTCAAAGATGTTCTGGCCACTCCATGAGGAGCTCTGGGGAAACACCT----------------GAAGAGCGAGAGGAGGTGAGATGCGAC-TGCTTTGCAACTGCGATCGGAAACCATCCCCAGA-ATGAAGCAATGGAAAAGAACAGTC--ACAGCTCCTC--AGCAG---AGACAGACAGACAGACACACAACAGGCACACACAGATGGATGTACATACTAGTGTCTAA-CAGTGAAGTTTTCTAATGAGCCTGG-CATTCAAAACTCATAAGAGCAATAAAATCCTATTGGCTTTAAACACTTATCTGCAGCCA------ACGTGCACACTG i mm10.chr14 C 0 I 142 s canFam3.chr4 27713608 849 + 88276631 AGCAGGTAATCTATTTTGGGGGGAGTCTGAGGACGTTTGAAAGTGTTAGGGTCGAAGATGGACTTCCTTTGCTTTGGCTTCTTATAAACAGAGAGCTTCTCGGGCCCTGCCGCAGAGCCGAGCACCGCCTTGGGCCAGGTCCCGCCGCTGTTGGAGCCCTCAGGGTCGGCCTTATCCAGGGGGGCCTCGGCCGCCCCGCAGGGGCCCACCTCAGTCTCGAAGGGCAGCAGGGGTCGCCGGCTGCGCACATCCAGCAGCCCATAGCCTCGCTCCCCAGAGGCGTCTGAGCGGAAGGAGCTCAGGCTGCGCTCGGAGGCACTGGGACAGGCCTGGGGGGAGACCGGGAAGGGTCCCCCAGGAAACGGCTTATGCAGGAAGGAGCTGCTGCCTCCCGGGGGGCCCAGCTCCCGCCTGTCCTCCAGCCTGTCTGCGTAGAAGATGTCCGTCTGCGTGGAGTTATTGTGCTGCAACAAGCTCCGTTTATTCTGAGCCTGGACCTCGGGGCCATGGGCTCGGACACTCAGCATCTTATCAGAGTCCTTGATGTTTTCAAAGATGTTCTGGCCACTCCAGGAGGAGCTCTGAGGGAACACCTACGTGGGGACGGCAGAG-AGTGAGAAACAGGGAGGAAGG-CCACAGAACTAGCACCGCCACCGAACGCAGTCCCTGCAGGGGAAGTGAGGATCAGCAACAGTCCACACACCCCCCAAAGACGGCTGGCCCGATGCACATGCAC-------GCGCACACACATG--CGTGCACGCCTGTCCCTGACCGGCGAGGCTCTCTCATGGCCCTGGCCACCATGAAC-CATGGGAGAG--------------ACTTCCAGCACCA-TCTGCAGCTGCC-------AGCACAATG i canFam3.chr4 C 0 C 0 e calJac3.chr12 75551065 1297 - 121768101 I a score=9948.000000 s hg38.chr10_KI270825v1_alt 61069 5 + 188315 gctca s panTro4.chr10 76431769 5 + 133524379 gctca i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76101518 5 - 133410057 gctca i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35042950 5 + 104879549 gctca i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73836238 5 - 130959383 gttca i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75397332 5 - 133195287 gttca i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73262075 5 - 125196307 attca i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72094065 5 - 125710982 gttca i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27714457 5 + 88276631 CCCTA i canFam3.chr4 C 0 I 195 e mm10.chr14 24159011 142 + 124902244 I e calJac3.chr12 75551065 1297 - 121768101 I a score=338614.000000 s hg38.chr10_KI270825v1_alt 61074 141 + 188315 tgcctgtaatcccagcgctttggtaggctgaggcaggcgggtcacgaggtcaggagttcgagaccagcctgaccgatatggtgaaaccccatctatacaaaaattacaaaaataagccaggcacggtggcatgcacctgta s panTro4.chr10 76431774 141 + 133524379 tgcctgtaatcccagcgctttggtaggctgaggcaggcgggtcacgaggtcaggagttcgagaccagcctgaccgatatggtgaaaccccatctatacaaaaattacaaaaataagccaggcacggtggcatgcacctgta i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76101523 141 - 133410057 tgcctgtaatcccagcgctttggtaggctgaggcaggcgggtcacgaggtcaggagttcgagaccagcctgaccgatatggtgaaaccccatctctataaaaattacaaaaataagccaggcacggtggcatgcacctgta i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35042955 141 + 104879549 tgcctgtaatcccagcgctttggtaggctgaggcaggcaggtcacgaggtcaagagttcgagaccagcctgaccaatatggtgaaacctcgtctctacaaaaattacaaaaagaagccaggcacggtggcatgcacctgta i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73836243 141 - 130959383 tgcctgtaatcccagcactttgggaggccgaggcaggcaggtcatgaggtcaggagttcaagaccagcctgaccaatatggtgaaaccccgtctctactgaagttataaaaataagccaggcacggtggcatgcaccagta i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75397337 141 - 133195287 tgcctgtaatcccagcactttgggaggccgaggcaggcaggtcatgaggtcaggagttcaagaccagcctgaccaatatggtgaaaccccgtctctactgaagttataaaaataagccaggcacggtggcatgcaccagta i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73262080 141 - 125196307 tgcctgtaatcccagcactttgggaggctgaggcaggcaggtcatgaggtcaggagttcaagaccagcctgaccaatatggtgaaaccccgtctctactaaagttataaaaataagccaggcacggtggcgtgcaccagta i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72094070 141 - 125710982 tgcctgtattcccagcactttgggaggccgaggcaggcaggtcatgaggtcaggagttcaagaccagcctgaccaatacggtgaaaccccgtctctactaaaattataaaaataagccaggcacggtggcatgcaccagta i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27714462 195 + 88276631 I e mm10.chr14 24159011 142 + 124902244 I e calJac3.chr12 75551065 1297 - 121768101 I a score=260539.000000 s hg38.chr10_KI270825v1_alt 61215 120 + 188315 gtcccagctacttgg----------------gagg-ctga----ggcaggagaatcgcttgaaccc-ggaggtggaggttgcagtgaactaagatcacgccactgcactccagtctgg-gcgacacaatgagactctgtctc----------a s panTro4.chr10 76431915 121 + 133524379 gtcccagctacttgg----------------gagg-ctga----ggcagatgaatcgcttgaacccaggaggtggaggctgcagtgaactaagatcacgccactgcactccagtctgg-gcgacacaatgagactctgtctc----------a i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76101664 121 - 133410057 gtcccagctacttgg----------------gagg-ctga----ggcaggagaatcacttgaacccaggaggtggaggttgcaatgaactaagatcatgccactgcactccagtctgg-gcgacacaacgagactctgtctc----------a i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35043096 121 + 104879549 gtcccagctacttgg----------------gagg-ctga----ggcaggagaatcacttgaacccaggaggtggaggttgcagtgaactaagatcacgccactgcactccagtctag-gcgacacagcaagactctgtctc----------a i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73836384 128 - 130959383 gtcccagctacttgg----------------gagg-ctga----ggcaggagaatcacttgaacccgggagatggagattgcagtgaagtgagctcacaccactgcactctagcctgg-gtgacagagcaaggctctgtctc---aaaaaaaa i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75397478 131 - 133195287 gtcccagctacttgg----------------gagg-ctga----ggcaggagaatcacttgaacccgggagatggagattgcagtgaagtgagatcacaccactgcactctagcctgg-gtgacagagcaaggctctgtctcaaaaaaaaaaa i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73262221 126 - 125196307 gtcccagctacttgg----------------gagg-ctga----ggcaggagaatcacttgaacccgggagatggagattgcagtgaagtgagatcacaccactgcactctagcctgg-gtgacagagcaaggctctgtctc-----aaaaaa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72094211 128 - 125710982 gtcccagctacttgg----------------gagg-ctga----ggcaggagaatcacttgaacccaggagatggagattgcagtgaagtgagatcacaccactgtactctagcctgg-gtgacagagcaaggctctgtctc---aaaaaaaa i chlSab2.chr9 C 0 C 0 s mm10.chr14 24159153 116 + 124902244 ggcccagctatgtggttttctaggaatggcagaggtctgaagacagtaaaaggattggtggttcttgggagccagag------gagaagtggaa---------------atggcctagcaggacacag-gagactttc--------------- i mm10.chr14 I 142 C 0 e canFam3.chr4 27714462 195 + 88276631 I e calJac3.chr12 75551065 1297 - 121768101 I a score=85051.000000 s hg38.chr10_KI270825v1_alt 61335 29 + 188315 aaaagaaggaaaTTACCTGCATAATGTCT s panTro4.chr10 76432036 29 + 133524379 aaaagaaggaaaTTACCTGCATAATGTCT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76101785 29 - 133410057 aaaaaaaggaaaTTACCTGCATAATGTCT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35043217 29 + 104879549 aaaaaaaagaaaTTACCAGCATAATGTCT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73836512 29 - 130959383 aaaaaaaggaaaTCACCTGCATAATGTCT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75397609 29 - 133195287 aaaaaaaggaaaTCACCTGCATAATGTCT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73262347 29 - 125196307 aaaaaaaggaaatcacctGCATAATGtct i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72094339 29 - 125710982 aaaaaaaggaaaTCACCTGCATAATGTCT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75552362 29 - 121768101 agagagagaAAATCACCTGCACAATGTCC i calJac3.chr12 I 1297 C 0 s mm10.chr14 24159269 20 + 124902244 aggacagtgaaactaccta---------t i mm10.chr14 C 0 C 0 e canFam3.chr4 27714462 195 + 88276631 I a score=1442205.000000 s hg38.chr10_KI270825v1_alt 61364 480 + 188315 TGAATA-TTTTTTTTAA-------ATATTAAACATAAAAGTAAAAATTCATTGTTAAAAATATATCTCTtgtggtacacc----------------cagacaacggaatataaattagcact--aaaaagaactg---------------aaacaacgtgcaggaaccttaagtg-----tatattagcaaat----------------------------gaagaagccatt---------ctatacactctgtgattccaactctatggcattctggaaaacacaaaagcatggaggcagtaaaaggatcagttgttgccaggggcttgcataaatatggggagcatagg-----------gaatttttagagcagtgaaactactctgtatgatattacaatggtagtacatgtcat--cacctgcatcaaaactcacagaaaatacacc---aagactgaaccttaatgtaaactatg-----------cattatag---------------------------------------------------------------------------------ttaata--------------ctaat-gcatccacattggctcactaattataacgcatgtactaactacactaacgcaaaatgccaaaattggggaaacttggg s panTro4.chr10 76432065 481 + 133524379 TGaatatttttttttaa-------atattaaacataaaagtaaaaattcattgttaaaaatatatCTCTtgtggtacacc----------------cagacaacggaatataaattagcact--aaaaagaactg---------------aaacaacgtggaagaaccttaagtg-----tatattagcaaat----------------------------gaagaagccatt---------ctatacactctgtgattccaactctatggcattctggaaaacacaaaagcatggaggcagtaaaaggatcagttgttgccaggggcttgcataaatatggggagcatagg-----------gaatttttagagcagtgaaactactctgtatgatattacaatggtagtacatgtcat--cacctgcatcaaaactcacagaaaatacacc---aagactgaaccttaatgtaaactatg-----------cattatag---------------------------------------------------------------------------------ttaata--------------ctaat-gcatccacattggctcactaattataacgcatgtactaactacactaactcaaaatgccaaaattggggaaacttggg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76101814 472 - 133410057 TGaatatttttttttta-------atattaaatgtaaaagtaaaaattcattgttaaaa--atatCTCTtgtggtacacc----------------cagacaacagaatattaattagcact--aaaaagaactg---------------aaacaacgtggaggaaccttaagtg-----tgtattagcaaat----------------------------gaagaagccatt---------ctatacactctgtgattccaattctatggcattctggaaaacacaaaagcatggaggcagtaaaaggatcagttgttgccaggggcttgcataaatatggggagcatagg-----------gaatttttagagcagtgaaactactctgtatgatattacaatggtggtacatgtcat--tacctgcatcaaaactcacagaaaatacacc-----------accttaatgtaaactatg-----------cattatag---------------------------------------------------------------------------------ctaata--------------ctaatggcatccacattggctcactaattgtaacgcatgtactaactacactaatgcaaaatgccaaaattggggaaacctggg i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35043246 487 + 104879549 TGAATA-TTTTTTTTAA-------ATATCAAACATAAAAGTAAAAACTCATTGTTAAAAATATATCTCTtgtggtacacc----------------cacacaacggaatattaattagcact--aaaaagaactg---------------aaacaacgaggaggaaccttaagtgtatattatattagcaaat----------------------------gaagaagccatt---------ctatacactctgtgattccaactctatggcattctagaaaacacaaaagcatggaggcaataaaaggatcagttgttgccaggggcttgcataaatatggggagcacagg-----------gaatttttagagcagtgaaactactctgtatgatattacaatggtggtacatgtcat--tacctgcatcaaaactc-cagaaaatacaccaccaagactgaaccttaatgtaaactatg-----------cattatag---------------------------------------------------------------------------------ttaata--------------ctaat-gcatccacattggctcactaattgtaacgcatgtgctaactacactaacgcaaaatgccaaaattggggaaacttggg i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73836541 498 - 130959383 TGAGta--ttttttaaa-------atattaaacataaaagtaaaaattcattgttaaaaatatatCTCTTGTGGTACATTCCGTTGTCTGGGTGTAcagacaacggaatattaattagcact--aaaaagaactg---------------aaatgacgtggaggaaccttaagtg-----tatattagcaagt----------------------------gaagaagccact---------ctatatactctgtgattccaactctatggcattctggaaaacacacaagcctggaggcagtaaaaggatcagttgttgccaggggcttagataaatatggggagcatagg-----------gaatgtttagagcagtgaaactactgtgtatgatattataatggtggtacatgtcat--tacctgcatcaaaactcacagaaaatacaccaccaagactgaaccttaatgtaaactatg-----------cattatag---------------------------------------------------------------------------------ttaata--------------ctaat-gcatccacattggctcgctaattgtaacgcatgtactaactacactaatgcaaaatgccaaaactggggaaacttagg i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75397638 482 - 133195287 TGAGTA--TTTTTTAAA-------ATATTAAACATAAAAGTAAAAATTCATTGTTAAAAATATATCTCTtgtggtacacc----------------cagacaacggaatattaattagcact--aaaaagaactg---------------aaatgacgtggaggaaccttaagtg-----tatattagcaagt----------------------------gaagaagccact---------ctatatactctgtgattccaactctatggcattctggaaaacacacaagcctggaggcagtaaaaggatcagttgttgccaggggcttggataaatatggggagcatagg-----------gaatgtttagagcagtgaaactactgtgtatgatattataatggtggtacatgtcat--tacctgcatcaaaactcacagaaaatacaccaccaagactgaaccttaatgtaaactatg-----------cattatag---------------------------------------------------------------------------------ttaata--------------ctaat-gcatccacattggctcgctaattgtaacgcatgtactaactacactaatgcaaaatgccaaaattggggaaacttagg i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73262376 482 - 125196307 tgagta--tttttttaa-------atattaaacataaaagtaaaaattcattgttaaaaatatatctcTTGTGGTACACT----------------CAGACAACGGAATATTAATTAGCACT--AAAAAGAACTG---------------AAACGACGTGGAGGAACCTTCAGTG-----TATATTAGCAAGT----------------------------GAAGAAGCCACT---------CTATATACTCTGTGATTCCAactctatgacattctggaaaacacACAAGCCTGGAGGCAGTAAAAGGATCAGTTGTTGCCAGGGGCTTGGATAAATATGGGGAGCATAGG-----------GAATgtttagagcagtgaaactacTGTGTATGATATTATAATGGTGGTACATGTCAT--TACCTGCATCAAAACTCACAGAAAATACACCACCAAGACTGAACCTCAATGTAAACTATG-----------CATTATAG---------------------------------------------------------------------------------TTAATA--------------CTAAT-GCATCCACATTGGCTCGCTAATTGTAACGCATGTACTAACTACACTAATGCAAAATGCCAAAATTGGGGAAACTTAGG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72094368 482 - 125710982 TGAGTA--TTTTTTTTA-------ATATTAAACATAAAAATAAAAATTCATTGTTAAAAATATATCTCTtgtggtacacc----------------cagacaacggaatattaattagcact--aaaaagaactg---------------aaacgacgtggaggaaccttaagtg-----tatattagcaagt----------------------------gaagaagccact---------ctatacactctgtgattccaactctatggcattctggaaaacacacaagcctggaggcagtaaaagaatcagttgttgccaggggcttggataaatatggggagcatagg-----------gaatgtttagagcagtgaaactactgtgtatgatattataatggtggtacatgtcat--tacctgcatcaaaactcacagaaaatacaccaccaagactgaaccttaatgtaaactatg-----------ctttatag---------------------------------------------------------------------------------ttaata--------------ctaat-gcatccacattggctcgctaattgtaacgcatgtactaactacactaatgcaaaatgccaaaattggggaaacttagg i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75552391 482 - 121768101 TGCata------ttaaaaaaatatatattaaacataaaagtaaaaattCATTGTCAAAAATGTATCTCTtgtggtacact--------------------caatgaaatatcaattagcact--aaagagaacta---------------aaacgatgtgaaggaatcttaagtg-----tataacagtaagt----------------------------gaagaaaccatt---------ctatataccctgtgactccaactctacggcattctggaaaacacaaaagcctggagatagtaaaaggatcagttgttgccaggggcttagacaaatatggggagcatgtg-----------gaatttttagggcagtgaaactactgtgtatgatactataatggtggtacatgtcaccacacatgcatcaaaactcacagaaaatacgccaccaagactgaacctcaatgtaaaccatg-----------catcatag---------------------------------------------------------------------------------ttaata--------------ctaat-gcat-catattggctcgctaattgtaacacacgtactaactacactaatgcaaaatgtcaaacctaggggaacttggg i calJac3.chr12 C 0 C 0 s mm10.chr14 24159289 324 + 124902244 ggagta-----ctttaa-------tgataacacgtgttagtatacat---atgtccaaa--------ccAGTGG--CTCT----------------CAGCCTGTGGGatttaccttacaatctgtaacagtagca---------------aaactacagtaatgaa-----gata-----taaagtagcaaga----------------------------aaa-----------------------------ataatttcttcaccacaacat---------------------gagg--------------gctgtagtaaagggtt-------------gcagcatagg-----------gaatgttgagacc-------------------------cactggtg-------------c----------aaacccacagaatatacaacatcaagagtgaacccccac-taagctagg-----------ca-----------------------------------------------------------------------------------------------------------------gcagtga---gggcacatcacccgtaccaaacgt----accacgcaaattcaaggtgacaataccagggaaacctagg i mm10.chr14 C 0 I 26 s canFam3.chr4 27714657 624 + 88276631 taaataaaacttttaaa-------aaaTAAAA---AAAAGTAAAGATTAA-----AAAAATATCTATCTtgtagtacatt----------------cataggattttaaatcatacagcaac--aaagagaaatgaactatcaagccacaaaatgacaggaagaaagcttaaatg-----catattactatgcacaaggaatgcataattcctttgaattggaagaagccaattcaaaacggccacatactgggtgatcccaa--ctgtgacatcccagaaaaggcagcactatggagactgtagaaagatcagtggctgc-agggacttgggggaa-acggggaggaaaggtggaactcagaagattcttagggcagtgaaactagtctgtatgatactatgatggtgga-----------tacacttgtctgaac-cataggatgtacaacaccaagagtgactcc---tgtcaactatggacttcaatactattataggggcacccagctggctcggttgggggagcccatgactcttgatctcgggggccccagctgggtgtagagattactaaaaaattaataaactttataaaaacatatt-acattgatactagctcattgattataacaaatg----aaccccaccaatgtaagctgctaacagcaggggaagcagag i canFam3.chr4 I 195 C 0 a score=130693.000000 s hg38.chr10_KI270825v1_alt 61844 43 + 188315 gacaggagtggggatggtggtgatggggtggttgagagagtgc s panTro4.chr10 76432546 43 + 133524379 gacaggagtggggatggtggtgatggggtggttgagagagtgc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76102286 43 - 133410057 gacaggagtggggatggtggtggtggggtggttgagagagtac i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35043733 43 + 104879549 gacaggagtggggatggtggtggtggggtggttgagacagtac i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73837039 43 - 130959383 gacaggagtggggatggtggtggtggggtggttgagagagtac i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75398120 43 - 133195287 gacaggagtggggatggtggtggtggggtggttgagagagtac i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73262858 43 - 125196307 GACAGGagtggggatggtggtggtggggtggttGAGAGAGTAC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72094850 43 - 125710982 gacaggagtggggatggtggtggtggggtggttgagagagtac i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75552873 43 - 121768101 gccgggagtgggaacggtggtggtgggatggctgagagagtac i calJac3.chr12 C 0 C 0 s canFam3.chr4 27715281 18 + 88276631 --cagag-----------------ggcttggatgaga------ i canFam3.chr4 C 0 C 0 e mm10.chr14 24159613 26 + 124902244 I a score=1085922.000000 s hg38.chr10_KI270825v1_alt 61887 321 + 188315 taagaattctgtatcagcccaacttttctgtaaacataaaactgcttcc--aaaaaagtcaaataatttGAAAATAGTTAA-TTTAGAAAACATCTC-TTAATAGAAAGTTAGAAAAAATAGGCCCAG-CCATTTCATTAAGAGATGTTTTCTAAATTCGGCCTAttttttctaacttcctattattaaacttttcaaatatgtagaaaag----tata--------ataaatgtccataaatgtaccatctagattcaaaaatatttcactaaattgtcttt-ttg-------tctataatgatactacagaacactggaaagcaagttacaaat-atcatgacat s panTro4.chr10 76432589 321 + 133524379 taataattctctatcagcccaacttttctgtaaacataaaaccacttcc--aaaaaagtcaaataatttGAAAATAGTTAA-TTTAGAAAACATCTC-TTAATAGAAAGTTAGAAAAAATAGGCCCAG-CCATTTCATTAAGAGATGTTTTCTAAATTCGGCCTAttttttctaacttcctattattaaacttttcaaatatgtagaaaag----tata--------ataaatgtccataaatgtaccatctagattcaaaaatatttcactaaattgtcttt-ttg-------tctataATGATACTACAGAACACTGGAAAGCAAGTTACAAAT-ATCATGACAT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76102329 327 - 133410057 taagaattctgtatcagcccaacttttctgtaaacataaaaccgcttcc--aaaaaagtcaattaatttGAAAATAGTTAA-TTTAGAAAACATCTC-TTAATAGAAAGTTAGAAAAAATAGGCCCAG-CCATTTCATTAAGAGATGTTTTCTAAATTTAGCCTATTTTTTCTAACTTCCTATTATTAAACTTTTCAAATATGTAGAAAAG----TATA--------ATAAATGTCCATAAACGTACCATCTAGATTCAAAAATATTTCACTAAATTGTCTTT-TTG-TCTATATCTATAATGATACTACAGAACATTGGAAAGCAAGTTACAAAT-ATCACGACAT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35043776 329 + 104879549 taagaattctgtatcagcctaacttttctgaaaacataaaaccgcttcc--aaaaaagtcaattaatttGAAAACAGTTAA-TTTAGAAAACATCTC-TTAATAGAAAGTTAGAAAAAATAGGCCCAG-CCATTTCATTAAGAGATGTTTTCTGAATTGGGCCTATTTTTTCTAACTTCCTATCATTAAACTTTTCAAATATGTAGAAAAG----TATA--------ATAAATGTCCATAAATGTACCATCTAGATTCAAAAATATTTCACTAAATTGTCTTT-TTTGCCTATATCTATAATGATACTACAGAACATTGGACAGCAAGTTACAAATAATCATGACAT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73837082 329 - 130959383 taagaattctgtatcagcccaacttttccataaacataaaactgtttccaaaaaaaagtcaattaatttGAAAATAGTTAA-TTTAGAAAATATCTC-TTAATAGAAAGTTAGAAAAAATAGGCCCAG-CCATTTCATTAAGAGATGTTTTCTAAATTGGGCCTAttttttctaactttctattattaaacttttcaaatatgtagaaaag----tata--------ataaatgtccataaatgtaccatgtagattcaacaatatttcactaaattgtcttt-ttg-tctgtatctataATGATACTACAGAACATTGGAAAGCAAGTTACGAAG-ATCATGACAT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75398163 329 - 133195287 taagaattctgtatcagcccaacttttccataaacataaaactgtttccaaaaaaaagtcaattaatttGAAAATAGTTAA-TTTAGAAAATATCTC-TTAATAGAAAGTTAGAAAAAATAGGCCCAG-CCATTTCATTAAGAGATGTTTTCTAAATTGGGCCTAttttttctaactttctattattaaacttttcaaatatgtagaaaag----tata--------ataaatgtccataaatgtaccatgtagattcaacaatatttcactaaattgtcttt-ttg-tctgtatctataatgatactacagaacattggaaagcaagttacgaag-atcatgacat i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73262901 330 - 125196307 TAAGAATTCTGTATCAGCCCAACTTTTCCATAAACAtaaaactgtttccaaaaaaaagtcaattaatttgaaaatagttaa-tttagaaaatatctctttaatagaaagttagaaaaaatagGCCCAG-CCATTTCATTAAGAGATGTTTTCTAAATTGGGCctattttttctaactttctattattaaacttttcaaatatgtagaaaag----tata--------ataaatgtCCATAAATGTACCATGTAGATTCAACGATATTTCACTAAATTGTCTTT-TTG-TCTGTATCTATAATGATACTACAGAACATTGGAAAGCAAGTTACGAAG-ATCATGACAT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72094893 329 - 125710982 taagaattctgtatcagcccaacttttccataaacataaaactgtttccaaaaaaaagtcaattaatttGAAAATAGTTAA-TTTAGAAAATATCTC-TTAATAGAAAGTTAGAAAAAATAGGCCCAG-CCATTTCATTAAGACATGTTTTCTAAATTGGGCCTAttttttctaactttctattattaaacttttcaaatatgtagaaaag----tata--------ataaatgtccataaatgtgccatgtagattcaacaacatttcacttaattgtcttt-ttg-tctatatctataatgatactacagaacactggaaagcaagttacaaag-atcatgacac i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75552916 328 - 121768101 taagaactctctatcagcccaacttttctgtcaacataaaactgcttcc--ataaaagtcaattaatttaaaaaTAGCTAA-TTTAGAAAACATCTC-TTAATAGAAAGTTAGAAAAAATAGGCCCAGCCCATTTCATTAAGAGATGTTTTCTAAATTGGGTCTA-TTTTTCTAACTTCCTATGATTAATCTTTTCATATATGTAGAAAAG----TACA--------ATAAATGTCCATAAAGGTACCATCTAGATTCAATAGTATTTTACTAAATTGTCTTTACTG-TCTATATCCGTAACAATACTGCAGAACACTGGAAAGCAAGTTACAAAT-ATCATAACAT i calJac3.chr12 C 0 C 0 s mm10.chr14 24159639 280 + 124902244 caagaacagtctaccagcccagatgttctgtagacctacaacagtcccc----aaacatctattagtttAAAAGAGG--AA-CTTAGAAAACATCTC-ACAGT------------GAAATGGACAGAC-TCA----------------------------------TGTTTCTACATTTCTATTGTTAACCTTTTCAACTGTGTAGGAAAGCTGATATAG---AAATATGAGTGCCTATACACCCACCCACCAGACTCAACA--ATTTTACCAGATAGCCTTTATCA-TCTTCATCGATGCTGGCA-TAAAGAACACTGGAAAGGG----ACATAT-ATCCTAGCAT i mm10.chr14 I 26 C 0 s canFam3.chr4 27715299 273 + 88276631 ----actcttgaactagctcaccttttctgt--atctaaaactgctccc---aaaaagtctgttaattttAAGATCATTAATTTTTAAAAACATCTC-TTAATGAAGTG-----------------AG-----------------------------TGGGCCTAtttttctcaaccttctatcataaatcctttcaactacgtataaaag----ttgagagaaaagttcaatgtccataaacccaccatttagagtcaacaatattttaccaaattgtctgt-----tctttatcc------acactgcagagcatttggaagtaactta--aac-attatgacat i canFam3.chr4 C 0 C 0 a score=11169.000000 s hg38.chr10_KI270825v1_alt 62208 3 + 188315 gtc s panTro4.chr10 76432910 3 + 133524379 GTC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76102656 3 - 133410057 GTC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35044105 3 + 104879549 GTC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73837411 3 - 130959383 GTC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75398492 3 - 133195287 gtc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73263231 3 - 125196307 Gtc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72095222 3 - 125710982 gtc i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75553244 3 - 121768101 GTC i calJac3.chr12 C 0 C 0 s mm10.chr14 24159919 3 + 124902244 TTC i mm10.chr14 C 0 I 24 e canFam3.chr4 27715572 0 + 88276631 C a score=1553426.000000 s hg38.chr10_KI270825v1_alt 62211 520 + 188315 acttcccttccttt-------------------------ttttttt---------------tttttttgagacagaggttcgctcttattgcccaggctggagtgcaaaggcgtgatctcagctcactgcaacctccgcctcctgggttcaagcgattctcctgcctcagtctcctgagtagctgggattacaggaatgcaccatcacatccg----gctatttttgtatttttagtagagacggggtt--tctccatgttggtcaaggctggtctcgaactcccgacctcaggtgatccaccc------gcctccca-aagtgctgggattacaggcatgagccattgcacccagcttcttcctttcatttttgagatagggtctcactttgtcacccaggctggagtgcagtggcacaatcacaactcactgccacctcgacctcccaggctttttgtattttctgtagaggcaaggtctcgctgtgttgctgggctcaagtgattcgactgccttggcctcccaaagtgttggggttacaggcatgagcaaccatgcccggccatgacac s panTro4.chr10 76432913 516 + 133524379 ACTTCCCttcc-----------------------------tttttt---------------tttttttgagacggaggttcgctcttgttgcccaggctggagtgcaaaggcgtgatctcagctcactgcaacctccgcctcctgggttcaagcgattctcctgcctcagtctcctgagtagctgggattacaggaatgcaccatcacatccg----gctatttttgtatttttagtagagatggggtt--tctccatgttggtcaaggctggtctcgaactcctgacctcaggtgatccaccc------gcctccca-aagtgctgggattacaggcatgagccatcacacccagcttcttcctttcatttttgagatagggtctcactttgtcacccaggctggagtgcagtggcacaatcacaactcactgccacctcgacctcccaggctttttgtattttctgtagaggcaaggtctcgctgtgttgctgggctcaagtgattcgactgccttggcctcccaaagtgttggggttacaggcatgagcaaccatgcccggccATGAcac i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76102659 534 - 133410057 ACTTCCCTTCCTTTTTCTCCCTCCCttcc----------ttttttt---------------tttttttaagatggagtttcgctcttgttgcccaggctggagtgcaaaggcgtgatctcagctcactgcaacctccgcctcctgggttcaagcgattctcctccctcaggctcctgagtagctgggattacaggaatgcaccaccacgtcca----gctatttttgtatttttagaagagacggggtt--tctccatgttggtc-aggctggtcacgaactcccgacctcaggtgatccaccc------gcctccca-aagtgctgggattacaggcgtgagccatcgcacccagcttcttcctttcatttttgagatagggtctcactttgtcacccaggctggagtgcagtggcacgatcacaactcactgccacctcgacctcccaggctttttgtattttctgtagaggcaaggtctcgctgtgttgctgggctcaagtgattcaactgccttggcctcccaaagtgttggggttataggcatgagccaccatgcccagcCatgacac i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35044108 535 + 104879549 ACTTCCCTTCCTTTTTCTCCCTCCCttcc----------ttttttt---------------tttttttgagacagagtttcgctcttgttgcccaggctggagtgcaaaggcgtgatctcagctcactacaacctctgcctcatgggttcaagcgattctcctgcctcaggctcctgagtagctgggattacaggaatgtgccaccatgtccg----gctatttttgtatttttagtagagacggggtt--tctccatgttggtc-aggctggtctcgaactcccgacctcaggtgatccaccc------gcctcccaggggtgctgggattacaggcatgagccatcgcacccagcctcttcctttcatttttgagatagggtctcactttgtcaccccgactggagtgcagtggcacgatcacagctcactgccacctcgacctcccaggctTTTTGTATTTTCTGTAGAGGCAAGGTCTTGCTGTGTTGctggactcaagtgattcgactgccttggcctcccaaagtgttgggattataggcatgagccaccatgcccggccATGAcac i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73837414 519 - 130959383 ACTTCCCttcctttttctc--------------------ttttttt---------------attttttgagacggagtttcgctcttgttacccaggctggagtacaaatgcatgatctcagctcactgcaacctctacctcctgggttcaagcgattctcttgcctcaggctcctgagtagctgagattacaggaatgcgccaccacgtccg----gctatttttgtatttttagtagagatggggtt--tctccatgttggtc-aggctggtcttgaactcccgacctcaggtgatccacct------gcctccca-aagtgctgggattacaggcatgagccatcgcgcccagccCC-----TTCAtttttgagacagggtctcactttgtcacccaggctggagtgcagtggcatgatcacggctcactgccacctcgacctcctgggctttttgtattttctgtagaggcaaggtcttgctgtgttgctgggctcaagtgattcgactgccttggcctcccaaagtgttgggattacagacatgagccaccatgcccggccATGAcac i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75398495 523 - 133195287 acttcccttcctttttctc--------------------ttttttt----------------ttttttgagacggagtttcgctcttgttacccaggctggagtacaaatgcatgatctcagctcactgcaacctctacctcctgggttcaagcgattctcttgcctcaggctcctgagtagctgagattacaggaatgcgccaccacgtccg----gctatttttgtatttttagtagagatggggtt--tctccatgttggtc-aggctggtcttgaactcccgacctcaggtgatccacct------gcctccca-aagtgctgggattacaggcatgagccatcgcgcccagccCCttcctttcatttttgagacagggtctcactttgtcacccaggctggagtgcagtggcatgatcacggctcactgccacctcgacctcctgggctttttgtattttctgtagaggcaaggtcttgctgtgttgctgggctcaagtgattcgactgccttggcctcccaaagtgttgggattacagacatgagccaccatgcccggccatgacac i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73263234 539 - 125196307 acttcccttcctttttctc--------------------tttttttttttttttttttttttttttttgagatggagtttcactcttgttacccaggctggagtgcaaaggcatgatctcagctcactgcaacctctacctcctgggttcaagcgattctcttgcctcaggctcctgagtagctgagattacaggaatgagccaccacgtccg----gctatttttgtatttttagtagagatggggtt--tctccatgttggtc-aggctgctcttgaactcccgacctgaggtgatccacct------gcctccca-aagtgctgggattacaggcatgagccatcgcgcccagcctcttcctttcatttttgagacagggtctcactttgtcacccaggctggagtgcagtggcacgatcacggctcactgccacctcgacctcctgggctttttgtattttctgtagaggcaaggtcttgctgtgttgctgggctcaagtgattcgactgccttggcctcccaaagtgttgggattacagacatgagccaccatgcctggccatgacaC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72095225 527 - 125710982 acttcccttcctttttctc--------------------ccttttt------------ttttttttttgagatggagtttcgctcttgttacccaggctggagtgcaaaggcatgatctcagctcactgcaacctctacctcctgggttcaagcgattctcttgcctcaggctcctgagtagctgagattacaggaacgcgccaccacgtccg----gctatttttgtatttttagtagagatggggtt--tctccatgttggtc-aggctggtcttgaactcccgacctcaggtgatccacct------gcctccca-aagtgctgggattacaggcatgagccatcgcgcccagccCCttcctttcatttttgagacagggtctcactttgtcacccaggctggagtgcagtggcacgatcacggctcactgccacctcgacctcctgggctttttgtattttctgcagagacaaggtcttgctgtgttgctgggctcaagtgattcaactgccttggcctcccaaagtgttgggattacagacatgagccaccatgcctggccatgacac i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75553247 556 - 121768101 ACTCCCCTTCCTTTTCCTCCCTCCCTCCCTTCCttttttctttttt---------------tttttttgagatggagttttactcttgttgtccaggctacagtgcagtggtaagatctcagctcactgcaacctccgcctcccaggttcaagcgattctcctacctcagcctcccaagtagctgggattgtgggtgtgcgccaccacacctatttttctatttttgtatttttagtagagatggggtttctctccatgttggtc-agactagtcttgaattcctgacctcaggtgatccgcctgcctcagcctccca-aaatgctgggattacaggcataagccacagtacccggtcCCttcctttcatttttgagacagggtctcactctatcaccaaggctggagtgcagtggcatgatcacagctcactgccacctcaacctcctgggctttttgtattttctgtagaggcagggtctcgctgtgttgctggactcaagtgatcccactgccttggcctcccaaagtgttgggattataggcatgagccaccacgcccagccACAACAC i calJac3.chr12 C 0 C 0 e canFam3.chr4 27715572 0 + 88276631 C e mm10.chr14 24159922 24 + 124902244 I a score=102952.000000 s hg38.chr10_KI270825v1_alt 62731 29 + 188315 atcacttctaacaactttagcttgtacct s panTro4.chr10 76433429 29 + 133524379 atcacttctaacaactttagcttgtacct i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76103193 29 - 133410057 atcacttctaacaactttagcttgtacct i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35044643 29 + 104879549 atcacttctaacaactttagcttgtacct i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73837933 29 - 130959383 atcacttctaacaactttagtttgtacct i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75399018 29 - 133195287 atcacttctaacaactttagtttgtacct i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73263773 29 - 125196307 ATCACTTCTAACAACTTTAGTTTGTACCT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72095752 29 - 125710982 atcacttctaacaactttagtttgtactt i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75553803 29 - 121768101 GTCGCTTCTAACAACTTTAGCTTGTGCCT i calJac3.chr12 C 0 C 0 s canFam3.chr4 27715572 29 + 88276631 cccacccctaacaaccttaccatatactt i canFam3.chr4 C 0 C 0 e mm10.chr14 24159922 24 + 124902244 I a score=2747054.000000 s hg38.chr10_KI270825v1_alt 62760 787 + 188315 cccccaaataaagccattctcctgtataacaaccccaatg----ccatcatcatacctaggaaaactggcaacaattccctaagatcatctaattatcgggtccagattcaaatgtacccaactgtgcccaacatggccttgactgctg-ttttttgatttcagaccagcgtccagtcagggttcCTGCCCCCTCTGCACTCAG-------TAAATGCCCA-CCCTGTTCTCAAGGA--TCCTGTGACCCCA-AGGAGTAGCA-TGGCTATGTGGAGCCGGGGCTC-TGCCCATACTCCTGACCGTGAGAGCAGAGCCAGGTCC-------AGCCCTTACCTTCAGGAGGGACAGGGTCAGGGAGTCCTGGCAGCTGCGCAGCAGAGATTCACATTCATTCAGAGACTTGTTGTCCAGTGCAATGCCATTGATCTAGAGCAGGACAGAGAGCATGTCAGG-CCACAGGCAGAGCGGCCTCAG--------GCCTACCA-GTCAGGATCTCTGCCTACCTAACCTCCTGTGCTAGACAGTCA-------CCAAATGCAAGGTGCCAAAGTCAGGAGTTGGCAAAGGATAG--AG---GTCTTTCTGGTGAGGCCCAAGGAGTCCAACTAAGGGGATTCTGAGGT-AGAG-GAACACATAAGCCTTCACAGCAGGCTAGGGG-AGGAGCATGTCCTTCTGGGATCAGAACACCGAGGACCCGGAGGGAACATCTTGGCACTGCTGTGCCCGGCCATGTGGCGTG-GGACCTTGGCTCAGAACTTCCCAGCTCCTTGCCTCCACAGAGGAAATGGAAGATAAATACATGCAT---------------------------------------------------GTGGCTCGG s panTro4.chr10 76433458 787 + 133524379 cccccaaataaagccattctcctgtataacaaccccaatg----ccatcatcatacctaggaaaactggcaacaattccctaagatcatctaattatcaggtccagattcaaatgtacccaactgtgcccaacatggccttgactgctg-ttttttgatttcagaccagtgtccagtcagggttcCTGCCCCCCCTGCACTCAG-------TAAATGCCCA-CCCTGTTCTCAAGGA--TCCTGTGACCCCG-AGGAGTAGCA-TGGCTATGTGGAGCCGGGGCTC-TGCCCATACTCCTGACCGTGAGAGCAGAGCCAGGTCC-------AGCCCTTACCTTCAGGAGGGACAGGGTCAGGGAGTCCTGGCAGCTCCGCAGCAGAGATTCACATTCATTCAGAGACTTGTTGTCCAGTGCAATGCCATTGATCTAGAGCAGGACAGAGAGCATGTCAGG-CCACAGGCAGAGCGGCCTCAG--------GCCTACCA-GTCAGGATCTCTGCCTACCTAACCTCCTGTGCTAGACAGTCA-------CCAAATGCAAGGTGCCAAAGTCAGGAGTTGGCAAAGGATAG--AG---GTCTTCCTGGTGAGGCCCAAGGAGTCCAACTAAGGGGATTCTGAGGT-AGAG-GAACACACAAGCCTTCACAGCAGGCTAGGGG-AGGAGCATGTCCTTCTGGGATCAGAACACCGAGGACCCGGAGGGAACATCTTGGCACTGCTGTGCCCGGCCATGTGGCGTG-GGACCTTGGCTCAGAACTTCCCAGCTCCTTGCCTCCACAGAGGAAATGGAAGATAAATACATGCAT---------------------------------------------------GTGGCTCGG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76103222 787 - 133410057 cccccaaataaggccattctcctgtataacaaccccaatg----ctatcatcatacctaggaaaactggcaacaattccctaagatcatctaattatcgggtccagattcaaatgtacccaactgtgcccaacaTGGCTTTGACTGCTG-TTTTTTGATTTCAGACCAGCGTCCAGTCAGGGTTCCTGCCCCCCCTGCACTCGG-------TAAATCACCA-CCCTGTTCTCAAGGA--TCCTGTGACTCCG-AGGAGTAGCA-TGGCTACGTGGAGCCAGGGCTC-TGCCCATACTCCTGACCGTGAGAGCAGAGCCAGGTCC-------AGCCCTTACCTTCAGGAGGGACAGGGTCAGGGAGTCCTGGCAGCTCCGCAGCAGAGATTCACATTCATTCAGAGACTTGTTGTCCAGTGCAATGCCATTGATCTAGAGCAGGACAGAGAGCATGTCAGG-CCACAGGCAGAGCGGCCTCAG--------GCCTACCA-GTCAGGGTCTCCGGCTACCTAACCTACTGTGCTAGACAGTCA-------CCAAATGCAAGGTGCCAAAGTCAGGAGTTGGCAAAGGATAG--AG---GTCTTCCTGGTGAGGCCCAAGGAGTCCAACTAAGGGGATTCTGAGTT-AGAG-GAACACATAAGCCTTCACAGCAGGCTAGGGG-AGGAGCATGTCCTTCTGGGATCAGAACACCGAGGACCCGGAGGGAACATCTTGGCACTGCTGTGCCCTGCCATGTGGCGCA-GGACCTTGGCTCAGAACTTCCCAGCTCCTTGCCTCCACAGAGGAAATGGAAGATAAATGCATGCAT---------------------------------------------------GTGGCTCGG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35044672 787 + 104879549 cccccaaataaggccattctcctgtataacaaccccaatg----ccatcatcatacctaggaaaactggcaacaattccctaagatcatccaattatcgggtccagattcaaatgtacccaactgtgcccaacatggccttgactgctg-ttttttgatttcagaccagcgtccagtcagggttcCTGCCCCCCCTGCACTCGG-------TAAATCCCCA-CTCTGTTCTCAAGGA--TCCTGTGACCCTG-AGGAGTAGCA-TGGCTATGTGGAGCCGGGACTC-TGCCCATACTCCTGACCATGAGAGCAGAGCCAGGTCC-------AGCCCTTACCTTCAGGAGGGACAGGGTCAGGGAGTCCTGGCAGCTCCGCAGCAGAGATTCACATTCATTCAGAGACTTGTTGTCCAGTGCAATGCCATTGATCTAGAGCAGGACAGAGGGCATGTCAGG-CCACAGGCAGAGCGGCCTCAG--------GCCTACCA-GTCAGGGTCTCCGCCTACCTAACCTCCTGTGCTAGACAGTCA-------CCAAATGCAAGGTGCCAAAGTCAGGAGTTGGCAAAGGATAG--AG---GTCTTCCTGGTGAGGCCCAAGGAGTCCAGCTAAGGGGATTCTGAGGT-AGAG-GAACACAAAAGCCTTCACAGCAGGCTAGGGG-AGGAGCATGTCCTTCTGGGATCAGAACATCGAGGACCCGGAGGGAACATCTTGGCACTGCTGTGCCCTGCCATGTGGTGCG-GGACCTTGGCTCAGAACTTCCCAGCTCCTTGCCTCCACAGAGGAAATGGAAGATAAATGCATGCAT---------------------------------------------------GTGGCTCGG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73837962 788 - 130959383 cccccaaataaggccattctcctgtataacaaccccagta----ccatcatcatacctaggaaaattggcaacaattccttaaggccatctaattatcaggtccagattcaaatgtacccaactgtgcccaacatggccttgattgcgg-ttttttgattgcaggccagcgtccagtcagggttcctgcccccactgcactcgg-------taaatCCCCA-CCCTGTTCTCAAGGA--TCCTGTGACCCTG-AGGAGTAGCG-TGGCTGTGTGGAGTCAGGGCTT-TGCCCATACTCCTGACTATGAGAGCGGAGCCATGTCC-------AGCCCTTACCTTCAGGAGGGACAGGGTCAGGGAGTCCTGGCAGCTCCGCAGCAGAGATTCACATTCATTCAGAGACTTGTTGTCCAGTGCAATGCCATTGATCTAGAGCAGGACAGACAGCACGTCAGG-CCACAGGCAGAGCGGCCTCAG--------GCCTACCAGGTTGGGGTCTCTGCCCACCTAACCTCCTGTGCTAGACAGTCA-------CCAAATGCAAGGTGCCAACGTCAGGAGTTGGCAAAGGATAG--AG---GTCCTCCTGATGAGGCTCAAGGAGTCCAGCTAAGGGGTTTCTGAGGT-AGAG-GAACACAAAAGCCTTCACAGCAGGCTGGGGG-AGGAACGTGTCCTTCTGGGATCAGAACACCGAGGACCTGGAGGGAACATCTTGGCCTGGCTGTGCCCTGCCACGTGGCACG-GGACCTCAGCTCAGAACTTCCCAGCCTCTTGCCTCCACAGAGGAAATGGAAGATAAATGCATGCAT---------------------------------------------------GTGGCTCGG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75399047 788 - 133195287 cccccaaataaggccattctcctgtataacaaccccagta----ccatcatcatacctaggaaaattggcaacaattccttaaggccatctaattatcaggtccagattcaaatgtacccaactgtgcccaacatggccttgattgcgg-ttttttgattgcaggccagcgtccagtcagggttcctgcccccactgcactcgg-------taaatCCCCA-CCCTGTTCTCAAGGA--TCCTGTGACCCTG-AGGAGTAGCG-TGGCTGTGTGGAGTCAGGGCTT-TGCCCATACTCCTGACTATGAGAGCGGAGCCACGTCC-------AGCCCTTACCTTCAGGAGGGACAGGGTCAGGGAGTCCTGGCAGCTCCGCAGCAGAGATTCACATTCATTCAGAGACTTGTTGTCCAGTGCAATGCCATTGATCTAGAGCAGGACAGACAGCACGTCAGG-CCACAGGCAGAGCGGCCTCAG--------GCCTACCAGGTTGGGGTCTCTGCCCACCTAACCTCCTGTGCTAGACAGTCA-------CCAAATGCAAGGTGCCAACGTCAGGAGTTGGCAAAGGATAG--AG---TTCCTCCTGATGAGGCTCAAGGAGTCCAGCTAAGGGGTTTCTGAGGT-AGAG-GAACACAAAAGCCTTCACAGCAGGCTGGGGG-AGGAACGTGTCCTTCTGGGATCAGAACACCGAGGACCTGGAGGGAACATCTTGGCCTGGCTGTGCCCTGCCACGTGGCACG-GGACCTCAGCTCAGAACTTCCCAGCCTCTTGCCTCCACAGAGGAAATGGAAGATAAATGCATGCAT---------------------------------------------------GTGGCTCGG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73263802 788 - 125196307 CCCCCAAATAAGGCCATTCTCCTGTATAACAACCCCAGTG----CCATCATCATACCTAGGAAAATTGGCAACAATTCCTTAAGGCCATCTAATTATCAGGTCCAGATTCAAATGTACCCAACTGTGCCCAACATGGCCTTGATTGCGG-TTTTTTGATTGCAGGCCAGCGTCCAGTCAGGGTTCCTGCCCCCACTGCACTCGG-------TAAATCCCCA-CCCTGTTCTCAAGGA--TCCTGTGACCCTG-AGGAGTAGCG-TGGCTGTGTGGAGTCAGGGCTT-TGCCCATACTCCTGACTATGAGAGCGGAGCCACGTCC-------AGCCCTTACCTTCAGGAGGGACAGGGTCAGGGAGTCCTGGCAGCTCCGCAGCAGAGATTCACATTCATTCAGAGACTTGTTGTCCAGTGCAATGCCATTGATCTAGAGCAGGACAGACAGCACGTCAGG-CCACAGGCAGAGCGGCCTCAG--------GCCTACCAGGTTGGGGTCTCTGCACACCTAACCTCCTGTGCTAGACAGTCA-------CCAAATGCAAGGTGCCAAAGTCAGGAGTTGGCAAAGGATAG--AG---GTCCTCCTGATGAGGCTCAAGGACTCCAGCTAAGGGGTTTCTGAGGT-AGAG-GAACACAAAAGCCTTCACAGCAGGCTGGGGG-AGGAACGTGTCCTTCTGGGATCAGAACACCGAGGACCTGGAGGGAACATCTTGGCCTGGCTGTGCCCTGCCACGTGGCACG-GGACCTCGGCTCAGAACTTCCCAGCCTCTTGCCTCCACAGAGGAAATGGAAGATAAATGCATGCAT---------------------------------------------------GTGGCTCGG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72095781 788 - 125710982 cccccaaataaggccattctcctgtataacaaccccagtg----ccatcatcatacctaggaaaattggcaacaattccttaaggtcatctaattatcaggtccagattcaaatgtacccaactgtgcccaacatggccttgattgcgg-ttttttgattgcaggccagcgtccagtcagggttcctgcccccactgcactcgg-------taaatCCCCA-CCCTGTTCTCAAGGA--TCCTGTGACCCTG-AGGAGTAGTG-TGGCTGTGTGGAGTCAGGGCTT-TGCCCATACTCCTGGCTATGAGAGCGGAGCCACGTCC-------AGCCCTTACCTTCAGGAGGGACAGGGTCAGGGAGTCCTGGCAGCTCCGCAGCAGAGATTCACATTCATTCAGAGACTTGTTGTCCAGTGCAATGCCATTGATCTAGAGCAGGACAGACAGCACGTCGGG-CCACAGGCAGAGCGGCCTCAG--------GCCTACCAGGTTGGGGTCTCTGCCCACCTAACCTCCTGTGCTAGACAGTCA-------CCAAATGCAAGGTGCCAAAGTCAGGAGTTGGCAAAGGATAG--AG---GTCCTCCTGATGAGGCTCAAGGAGTCCAGCTAAGGGGTTTCTGAGGT-AGAG-GAACACAAAAGCCTTCACAGCAGGCTGGGGT-AGGAACGTGTCCTTCTGGGATCAGAACACCGAGGACCTGGAGGGAACATCTTGGCCTGGCTGTGCCCTGCCACGTGGCACG-GGACCTCGGCTCAGAACTTCCCAGCCTCTTGCCTCCACAGAGGAAATGGAAGATAAATGCATGCAT---------------------------------------------------GTGGCTCGG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75553832 769 - 121768101 -CCCCATataaggccattctcctgtataacaa-cccagtg----ccatcatcacacctgggaaaattggcaacaattccctaagatcatctaattatctggtccagattcaaatgtacccaactgAG-CCAACTTGGCCTTGATTGCTGTTTTTTTAATTTCAGACTAGCATCCAGTCAGGGTTCCTGCCCCCACTGCACTCTG-------TAAATCCCCA-CCCTGTTCTCAAGGG--TCCCATGACCCTG--TAAGTAATGTTGACTATGTGGAGTCGGGGCTT-TGCCGACACTCCCAACCCTCAGAGCGGAGGCACATGC-------AGCCCTTACCTTCAGGAGGGACAGAGTCAGGGAGTCCTGGCAGCTCCGCAGCAGAGATTCACATTCATTCAGAGACTTGTTGTCCAGTGCAATGCCATTGATCTAGGGCAGGACAGAGAGCACGTCAGG-CCACCAGCAGAGCAGCCTCAG--------GCCTACCAGGTCAGGGCCTCTGCCCACCTGCCCTCCTGTGCTAGACAGTCA-------CCAAATGC-AGTTGACAAAGTCAGGAGCTGGCAAAGGTTAG--AG---GTCCTCCTAGTGAGGCCCAAGGAGTCTGGATAAGGGCCTTCTAAGGT-AGAG-GAATACAAGAGCCTTCACAGCAGGCTAGGGG-AGGAGCATGTCCTTCTGGGACCAGAACACTGAGGATCTGG-GGGAATATCTTGGCCCTACTGTGCCCTGACACATGGTA--------------CAGGACTTCCCAGCTCCTTGCCTCCAC--AGGAAATGGAAGATAAACACATGCAT---------------------------------------------------ACACCTTGG i calJac3.chr12 C 0 C 0 s mm10.chr14 24159946 710 + 124902244 CCATCACAGATGGCCATTCTCCACTA----AATTCCAAGGTCACTCATTGCCAGGCCTAAGGAACCTAATTA----TCTCTAGGACCAACAGACTGTCCAGTCCCGATTGAAATGTGCCCAGCTGTTCTTAA--TGGTATTG--------TTTTTTAA-------CCTATATCCAGTCAGTTTTCCTACACC--ATGCATTTGGAAATCAATGAATCCCCCTCCCCCCACCCCAGGT--TCCTGGTACCCTTTAGAAACAGCT-CAGGAGCATGAAGCTGAGGCTTCTTCTCACCCTCCCAACCGTGGCAGAAGTGCC-----C-------AGTGCCCACCTTCAGGAGGGAGAGGGTCAAGGAGTCTTGACAGCTGCGCAGCAGAGATTCACATTCATTTAGAGACTTATTGTCCAGTGCAATACCGTTGATCTAGGGCCAAAGAGAGAACTGGTCAGGACAACTGATGGGGCGGCCTCAGTGATCCCAGACTGCAAGGCCAGAGGCTAGGCCCACCTG----CCAATCCTAG---GACT-------CTTTATGTAAGGAGCAAAACTCAGGGATTAGTGAGGGAAAGCAAG---ACCCTCCCCA-GCAGCACCTGGA-CCTAGGTAAGTATCTTCTGAAGCAAGCG-GAACACAA---TCCTAACATCACACTGGA------------------TGGGATCAGAGCACAGGGGACCCCAGGGAGACATCCT------ACTGTGTGCTACCAG----------------------------------TCCATTCTTTCAT-GCGTGAGTGGCCAAGATATACATCTAC---------------------------------------------------ATCCC---- i mm10.chr14 I 24 C 0 s canFam3.chr4 27715601 792 + 88276631 -ccccaaataaggccatttggcccttt---aaccccaata----ccatcactgtacccaggaaaaat------------------------aactactgagttcagattcaaatgtacatcactgtcctcaaaatgtccttcatgtctt-gttttggtttttaaaccaggatccagtcaggattcatgcaCACCCTGCACTTTA-------TAAATCAATA-CCTTGTTTTCAAGGACTCCCAGCGATGCCG-AGTAGCAGCT-CAGGTATACGGAGCTGAGGCCT-TGCCTGCCCCACAGCCGATGAGAGCAGAGCCGGTGTTGGGTGGGGGCCCTTACCTTCAGGAGGGAGAGGGTCAGGGAGTCCTGGCAGCTCCGCAGCAGAGATTCACACTCATTCAGAGATTTGTTGTCCAGTGCAATGCCATTGATCTAGGACCAGACAGAGAGCCTGTGAGG-CC---------------------------CACCACTGGGTCAGCGTCTCTGCCAG--------TCTGTTCTGGACAGTGGGCCTGGCTCTTCTATAGAGTACCCAAGTCTGGAGCTGGCAAAGGAGAG--AAAGCGCTTCCCCAGGAAAGCCTGAGAAATCCAGTTAAGGGGCATCTGAGGC-AAAGAAAACACAC-GGCCTTAAAATCATGCTAGGGGCAGGTGCTTGTATAATTGGGACCAGAACACCAAGCACCCCAGGGGGGCAGCCAGGCTTTGCTGCTGCCCACCATGCGAGGTGCTGACTACGGCTCAGAACTG-------------CTTCACGCACAGAGTGGAAAATAAACAAACACATCTGCCTGCCAGGTCTGAAGACTTAAAAATGAGATCATGGTggggcgcctgggtggctcag i canFam3.chr4 C 0 I 156 a score=29342.000000 s hg38.chr10_KI270825v1_alt 63547 11 + 188315 GAGAGC-GGGGG s panTro4.chr10 76434245 11 + 133524379 GAGAGC-GGGGG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76104009 11 - 133410057 GAGAGC-GGGGG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35045459 11 + 104879549 GAGAGC-GGGGG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73838750 12 - 130959383 GAAAGCAGGGGG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75399835 12 - 133195287 GAAAGCAGGGGG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73264590 12 - 125196307 GAAAGCAGGGGG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72096569 12 - 125710982 GAAAGCAGGGGG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75554601 11 - 121768101 GAGAGC-AGGGG i calJac3.chr12 C 0 C 0 s mm10.chr14 24160656 11 + 124902244 -AGAGTTGGGTG i mm10.chr14 C 0 C 0 e canFam3.chr4 27716393 156 + 88276631 I a score=1038607.000000 s hg38.chr10_KI270825v1_alt 63558 313 + 188315 ACTAAAAACAAGACCATGGATAGGAAAGGCCTT----GTAGA---GAAAGTACCACGCGAAGTGG---GGCCCTGTGAGTGTTCACAAAGAACCTCTCAA-CCCTGCTCCCGGAATCTCTG---------CTCACAGCTATGTGCAGACCTTCTT------------------AAGAAGTATATGTGcaaccggtgaatgaccaaactgtgatacacccac----attgcagaacactgctcagcaacgata----------agtaacaagcagccagcacacgcagcctcttgggtggatcttgcaggcatggtgcggaatcaaaacagcccagctccaaaggtcacatactatatgattccat s panTro4.chr10 76434256 322 + 133524379 ACTAAAAACAAGACCATGGATAGGAAAGGCCTT----GTAGA---GAAAGTACCACGCGAAGTGG---GGCCCTGTGAGTGTTCACAAAGAACCTCTCAA-CCCTGCTCCCGGAATCTCTGCCCACATCCCTCACAGCTATGTGCAGACCTTCTT------------------AAGAAGTATATGTGcaaccggtgaatgaccaaactgtgatacacccac----attgcagaacactgctcagcaacgata----------agtaacaagcagccagcacacgcagcctcttgggtggatcttgcaggcatggtacggaatcaaaagagcccagctccaaaggtcacatactatatgattccat i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76104020 322 - 133410057 ACTAAAAACGAGACCATGGATAGGAAAGGCCTT----GTAGA---GAAAGTACCATGTGAAGTGG---GGCCCTGTGAGTGTTCACAAAGAACCTCTCAA-CCCTGCTTCTGGAATCTCTGCCCACATCCCTCACAGCTATGTGCAGACGTTCTT------------------AAGAAGTATACGTGcaactggtaaatgactaaactctaatacacccac----gttgcagaacactgcttagcaatgata----------aggaacaagcagccagcacacgcagcctcttgggtggatcttgcaggcatggtgcggaatcaaaacagcccagctccaaaggtcacatactatattattccat i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35045470 322 + 104879549 ACTAAAAACAAGACCATGGATAGGAAAGGCCTT----GTAGA---GAAAGTACCACGTGAAGTGG---GGCCCTGTGAGTGTTCACAAAGAACCTCTCAA-CCCTGCTCCCAGAATCTCTGCCCACATCCCTCACAGCTATGTGCAGACCTTCTT------------------AAGAAGTGTATGTGcaaccagtgaatgactaaactgtgatacacccac----attgcagaacactgctcagcaatgata----------aggaacaagcagtcagcacacacagccttttgggtggatcttgcaggcgtggtgtggaatcaaaacagcccagctccagaggtcacaaactatatgattccat i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73838762 311 - 130959383 ACTAAAAACAAGACCATGGATAGGAAAGGCCTT----GTAGA---GAAAGTACCACATGAAGTGG---GGCCCTGTGAGTGTTCACAAAGAACCTCTCAA-CCCTGCTCCCGGAATCTCTGCCCACATCCCTCACAGCTATGTGCAGACCTTCTT------------------AAGAAGTGTAGGTGcaacaggtgaatgactaaactgtgatacaat---------------gcactgctcagcaatgata----------aggaacgagcggccggcacacgcagcctcttgggtggatcttggtggcatggtacggaatgaaaacagcccagctccaaagatcacatactatatgattccat i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75399847 322 - 133195287 ACTAAAAACAAGACCATGGATAGGAAAGGCCTT----GTAGA---GAAAGTACCACATGAAGTGG---GGCCCTGTGAGTGTTCACAAAGAACCTCTCAA-CCCTGCTCCCGGAATCTCTGCCCACATCCCTCACAGCTATGTGCAGACCTTCTT------------------AAGAAGTGTAGGTGcaacaggtgaatgactaaactgtgatacacccac----attgcagagcactgctcagcaatgata----------aggaacgagcggccggcacacgcagcctcttgggtggatcttggtggcatggtgcggaatgaaaacagcccagctccaaagatcacatactatatgattccat i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73264602 322 - 125196307 ACTAAAAACAAGACCATGGATAGGAAAGGCCTT----GTAGA---GAAAGTACCACATGAAGTGG---GGCCCTGTGAGTGTTCACAAAGAACCTCTCAA-CCCTGCTCCCGGAATCTCTGCCCACATCCCTCACAGCTACGTGCAGACCTTCTT------------------AAGAAGTGTAGGTGCAATAGGTGAATGACTAAACTGTGATACACCCAC----ATTGCAGAGCACTGCTCAGCAATGATA----------AGGAACGAGCGGCCGGCACACGCAGCCTCTTGGGTGGATCTTGGCGGCATGGTGCGGAATGAAAACAGCCCAGCTCCAAAGatcacatactatatgattccat i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72096581 321 - 125710982 ACTAAAAACAAGACCATGGATAGGAAAGGCCTT----GTAGA---GAAAGTACCACATGAAGTGG---GGCCCTGTGAGTGTTCACAAAGAACCTCTGAA-CCCTGCTCCCGGAATCTCTGCCCACATCCCTCACAGATATGTGCAGACCTTCTT------------------AAGAAGTGTATGTGcaacaggtgaacgactaaactgtgatacacccac----attgcagagcactgctcagcaatgata----------aggaacaagcggccggcacac-cagcctcttgggtggatcttgcaggcatggtgcggaatgaaaacagcccagctccaaagatcacatactatatgattccat i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75554612 314 - 121768101 ACTAAAAACAAGACCATGGGTAGAAAAGGCCTT----GTAGA---GAAAGCACCCCATCAAGTGG---AGTCCTGCGATTGTTCACAAAGAACCTCTCAA-CCCTGCTCCCGGAATCTCTGCCCACATCCCTCACAGCTATGTGCAGACCTTCTT------------------AAGAAGTCTGTg--------gtgaatgactaaactgtaatatacccgc----accacagaacactggtcagcaatgaaa----------aggaacaagcggccaggacacgcagcctcttgggtggatctcgcaggcatggtgcggagtgaaaacagccaagctcccaaggtcacatactatatgattctat i calJac3.chr12 C 0 C 0 s mm10.chr14 24160667 310 + 124902244 -----------GAGAATGGAAAGGAGAGGCCTTTGTGACACA---GAAAGTACCACATAAAATGA---AGCTCTGCCATTAT---CAAAGAGAATCAACA-CCCT-CTCCTGGAA--TCTGCCCTCATCTCTCACAGACATGGTCAAACTTTCTCTTaaaaaaaaaaaaaaaaaaaaaaaGCACGTGC-TTTGGTGCATGCCC------TGGTGTACCTAA----GCCCCAGAG--ACACCTAGAGATGGAA----------AG--ACTGACTGTTGGGACACACAACACTT--GGAGGCTGTCACAGG-GTGGTGTCAAGTGAATACAGCCTTGAT---GGAGTCACACACTGTATGGTGTCAT i mm10.chr14 C 0 I 2191 s canFam3.chr4 27716549 338 + 88276631 AATAAaaatgagatcatggtgtggaaggccttt----ataaactgtgaggtgtcatgtgagatgagatggtatcatcactGTTCGTGAAGATTCTCATAATCTCTTAGGCCTCAACCTCTGTCCACATTTCTCACTGATATGTTGCACTCTTTTA------------------AATAAGCGTATGCATGACA-gtgaatggttagactgggatgcacccacccagaccacggaatactgcgtcaagaaaatatagcgtcaagaaaaacacgctaacaggaccctgagcacct--gatgggtctcat-ggcagcatgctgggtgga-acagctaatcccaaaaggacataaaccatatgattcaat i canFam3.chr4 I 156 C 0 a score=1044872.000000 s hg38.chr10_KI270825v1_alt 63871 368 + 188315 gtctgtaacattctcaaaaggacaacatcacagagatggagaaaaaatcagctgccagggggcagggatgggag---------ggagc-----------------agggggtgttactacaaatgggcagtgggagggagacctcagtgctgatagaacagctacgtatcttca--ttacggtggtggttacacagaacaacatgtgtttaaccacacacaaccacacacacacacacacacacacacacacacacacacacacagtaccaatgtcaatatgctagctttgatatta--tactcatgcaaggtgcaaccatgaggggaagcagggagaagagtacataggacccccctgtactatctctgcagctt--cctatgaatctat------------------------aatcatttc s panTro4.chr10 76434578 352 + 133524379 gtctgtaacattctcaaaaggacaacatcacagagatggagaaaaaatcagctgccagggggcagggatgggag---------ggagc-----------------agggggtgttactacaaatgggcagtgggagggagacctcagtgctgatagaacagctacgtatcttca--ttacggtggtggttacacagaacaacatgtgtttaaccacacacaac----------------cacacacacacacacacacacacacagtaccaatgtcaatatgctaactttgatatta--tactcatgcaaggtgcaaccatgaggggaagcagggagaagagtacataggacccccctgtactatctctgcagctt--cctatgaatctat------------------------aatcatttc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76104342 355 - 133410057 gtctgtaacattctcaaaaagacaacatcacagagatggagaaaaaatcagctgcc-gggggcagggatgggag---------ggagc-----------------aggggatgttactacaaatgggcagtgggagggagacctcagtgctgatggaacagctacatatcttca--ttacggtggtggttacacagaacaacatgtgtttaaccacacaca------------cacacacacacacacacacacacacacacacagtaccaatgtcaatatgctagctttgatatta--tactcatgcaaggtgcaaccatgaggggaagcagggagaaaagtacataggacccccccgtactatctctgcagctt--cctatgaatctat------------------------aatcatttc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35045792 368 + 104879549 gtctgtaacattctcaaaagg---acatcacagagatggagaaaaaatcagctgcc-gggggcagggatgggag---------ggagctgccgggggcagggatgggagggtgttactacaaatgggcagtgggagggagacctcagtgctgat-gaacagctacgcatcttca--ttatggtggtggctacacagaacaacatgtgtTTAATcacacacaac------------cacacacacacacacacacacacacacacagtaccaatgtcaatatgctagctttgatatta--tactcatgcaaggtgcaaccatgaggggaagcagggagaagagtacataggactcccctgtacgatctctgcagctt--cctatgaatctat------------------------aatcatttc i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73839073 330 - 130959383 gtctgtaacattctcaaaaggacaacatcacagagatggagaacaaatcagctgcca-agggcagggatgggag---------ggagc-----------------agggggtgttactacaaatgggcagagggagggagacctcagtgctgat-gaacagctacgcatcttca--ttatggtggtggttacacagaacaacatgtgttaaaccacaaacaac------------------------------------cacacagtaccaatgtcaatatgctagctttgatatta--tactcatgcaatgtgcaaccatgaggggaagcagggagaagagtacataggactcccctgtactatctctgcagctt--cccatgaatctat------------------------aatcatttc i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75400169 331 - 133195287 gtctgtaacattctcaaaaggacaacatcacagagatggagaacaaatcagctgcca-agggcagggatgggag---------ggagc-----------------agggggtgttactacaaatgggcagagggagggagacctcagtgctgatggaacagctacgcatcttca--ttatggtggtggttacacagaacaacatgtgttaaaccacaaacaac------------------------------------cacacagtaccaatgtcaatatgctagctttgatatta--tactcatgcaatgtgcaaccatgaggggaagcagggagaagagtacataggactcccctgtactatctctgcagctt--cctatgaatctat------------------------aatcatttc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73264924 342 - 125196307 gtCTGTAACATTCTCAAAAGGACAACATCACAGAGATGGAGAACAAATCAGCTGCCAGGGGGCAGGGATGGGAG---------GGAGC-----------------AGGGGGTGTTACTACaaatggacagagggagggagaccTCAGTGCTGATGGAACAGCTACGCATCTTCA--TTATAGTGGTGGTTACACAGAACAACATGTGTTAAACcacacacaac--------------------------cccccacacacacacagtaccaATGTCAATATGCTAGCTTTGATATTA--TACTCATGCAATGTGCAACCAtgaggggaggcagggagaagagtACATAGGAAACCCCTGTACTATCTCTGCAGCTT--CCTATGAATCTAT------------------------AATCATTTC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72096902 342 - 125710982 gtctgtaacattctcaaaaggacaacatcacagagatggagaacaaatcagctgccagggggcagggatgggag---------ggagc-----------------agggggtgttactacaaatgggcagagggagggagacctcagtgctgatggaacagctacgcatcttca--ttatggtggtggttaaacagaacatcatgtgttaaaccacacacaac--------------------------cacacacacagacacagtaccaatgtcaatatgctagctttgatatta--tactcacgcaatgtgcaaccatgaggggaagcagggagaagagtacacaggactcccctgtactatctctgcagctt--cctatgaatctat------------------------aatcatttc i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75554926 351 - 121768101 gttggtgacattctcaaaaggacaacatcacaaagagggagaactcatcagctgccagggggcagggatggaag---------ggagc-----------------agggggtatgactacaaagggggagtggga--cagacctcagtgctgatggaatagctatgtatcttca--ctgtggtggtggttacacagaacaac--gtgttaaaccatacacaca------cacacacacacacacacacacacacacacacacagagtgccaatgtcaatatgc------tgatatta--cacttacacaaggtgcaaccacaaggggaagtggggagaagagtacataggacccccctttagcatctctgcagctt--cctat-aatctac------------------------aatcatttt i calJac3.chr12 C 0 C 0 s canFam3.chr4 27716887 396 + 88276631 ttatggaatgtcctcgagatgacaagattatacagatggag--caaactggctgccaagggttaaggaagagggttggagggcagagt-----------------tgtggatattcctatagaggggtaacacgggaaagacctttgtgccagtggaacagcgctgtatcttaattttttggttgctgttacttaaaacgtgata-ataaaatgacgtagaac--------tacacacacacacacacacgcacgcacgcacacggttcccgtatcaaccacccagtttcgatattatttagtcatgtaaaaggtaacctttaggggaaactgcatgaagggcacatgggacctccccgcactatcttcaccactttatctatttttcaatattatttATTTAATGTCACAACTGAATTATTTC i canFam3.chr4 C 0 I 15 e mm10.chr14 24160977 2191 + 124902244 I a score=58217.000000 s hg38.chr10_KI270825v1_alt 64239 26 + 188315 aaagtcaagttttc-----tt-----------tttttttttt s panTro4.chr10 76434930 27 + 133524379 aaagtcaagttttc----ttt-----------tttttttttt i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76104697 31 - 133410057 aaagtcaagttttcttttttt-----------tttttttttt i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35046160 28 + 104879549 aaagtcaaGttttc---tttt-----------tttttttttt i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73839403 29 - 130959383 aaagtcaagttttc--ttttt-----------tttttttttt i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75400500 30 - 133195287 aaagtcaagttttc-tttttt-----------tttttttttt i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73265266 37 - 125196307 AAagtcaagttttc-tttttt----tttttcctttttttttt i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72097244 41 - 125710982 aaagtcaagttttc-ttttttttttttttttttttttttttt i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27717298 26 + 88276631 AAAGTTAAAAtttt-----tt-----------ttttaatttt i canFam3.chr4 I 15 I 464 e mm10.chr14 24160977 2191 + 124902244 I e calJac3.chr12 75555277 0 - 121768101 C a score=521041.000000 s hg38.chr10_KI270825v1_alt 64265 209 + 188315 gagatggagtctcgctctgtccctcaggctgaagtgcagaggcatgatctcggctcgctgcaacctccgcctcccaggttcaagcaattctcctatctcagtctcccgagtagctgggattacagatgtatgcctccatgcccggctaatatttttgtattttagtagagatggggtttcattgtgttgcccaggctggtctcgaaccc s panTro4.chr10 76434957 209 + 133524379 gagatggagtctcgctctgtccctcaggctgaagtgcagaggcatgatctcggctcgctgcaacctccgcctcccaggttcaagcaattctcctatctcagtctcccgagtagctgggattacagatgtatgcctccatgcccggctaatatttttgtattttagtagagatggggtttcatcgtgttgcccaggctggtctcgaaccc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76104728 209 - 133410057 gagatggagtctcgctctgtccctcaggctgaagtgcagaggcatgatctcggctcgctgcaacctccgcctcccaggttcaagcaattctcctacctcagcctcccaagtagctgggattacagacgtatgcctccatgcccggctaatatttttgtattttagtagagatagggtttcaccgtgttgcccaggctggtctcgaaccc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35046188 209 + 104879549 gagatggagtctcgctctgcccctcaggctgaagtgcagaggcatgatcttggctcactgcaacctccgcctcccaggttcaagcaattctcctatctcagcctcccgagtagctgggattacagacgtatgcctccatgcccggctaatttttttgtattttagtagagacagggtttcaccgtgttgcccaggctggtctcaaacCC i nomLeu3.chr18 C 0 M 100 s rheMac3.chr9 73839432 209 - 130959383 gagatggagtctcgctctgtccctcaggctgaagtgcagaggcatgatctcggctcactgcaacctccgcctcccaggttcaagtaattctcctatctcagcctcccaagtaactgggattgcaaacgcatgcctccatgcccggctaatttttttgtattttagtagagacagggtttcactgtgttgcccaggttggtcttgaactc i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75400530 209 - 133195287 gagatggagtctcgctctgtccctcaggctgaagtgcagaggcatgatctcggctcactgcaacctccgcctcccaggttcaagtaattctcctatctcagcctcccaagtaactgggattgcaaacgcatgcctccatgcccggctaatttttttgtattttagtagagacagggtttcattgtgttgcccaggttggtcttgaactc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73265303 209 - 125196307 gagatggagtctcgctctgtccctcaggctgaagtacagaggcatgatctcggctcactgcaacctccgcctcccaggttcaagcaattctcctatctcagcctcccgcgtaactgggattgcagacgcatgcctccatgcccggctaatttttttgtattttagtagagacagggtttcactgtgttgcccaggctggtcttgaactc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72097285 209 - 125710982 gagatggagtctcgctctgtccctcaggctgaagtgcagaggcatgatctcggctcactgcaacctccgcctcccaggttcgagtaattctcctatctcagcctcccaagtaactgggattgcagacgcatgcctccatgcccggctaatttttttgtattttagtagagacagggtttcactgtgttgcccaggctggtcttgaactc i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27717324 464 + 88276631 I e mm10.chr14 24160977 2191 + 124902244 I e calJac3.chr12 75555277 0 - 121768101 C a score=67945.000000 s hg38.chr10_KI270825v1_alt 64474 38 + 188315 ctgaactaaggcaatccacccgcctcggcctcccaaag s panTro4.chr10 76435166 38 + 133524379 ctgaactcaggcaatccacccgcctcggcctcccaaag i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76104937 38 - 133410057 ctgaactcaggctatccacccgcctcggcctcccaaat i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73839641 38 - 130959383 ctgaactcaggcaatccacccacctcagtctcccaaag i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75400739 38 - 133195287 ctgaactcaggcaatccacccacctcagtctcccaaag i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73265512 38 - 125196307 ctgaactcaggcaatccacccacctcggtctcccaaag i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72097494 38 - 125710982 ctgaactcaggcaatccacccaccttggtctcccaaag i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27717324 464 + 88276631 I e mm10.chr14 24160977 2191 + 124902244 I e nomLeu3.chr18 35046397 100 + 104879549 M e calJac3.chr12 75555277 0 - 121768101 C a score=78679.000000 s hg38.chr10_KI270825v1_alt 64512 36 + 188315 tgctaggattacaggcgtgagcc-------accatgcccggcc-- s panTro4.chr10 76435204 36 + 133524379 tgttaggattacaggcgtgagcc-------accatgcccggcc-- i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76104975 38 - 133410057 tgctaggattacaggcgtgagcc-------accatgcccggccaa i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35046497 45 + 104879549 TGATAGGATTACAGGCGTGATCCTAGCCTGACTTTGCCTGGCCAA i nomLeu3.chr18 M 100 C 0 s rheMac3.chr9 73839679 38 - 130959383 tgctaggattacaggcgtgaacc-------accacgcctggccaa i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75400777 38 - 133195287 tgctaggattacaggcgtgaacc-------accacgcctggccaa i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73265550 38 - 125196307 tgctaggattacaggcgtgaacc-------accacgcctggccaa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72097532 38 - 125710982 tgctaggattacaggcgtgagcc-------accacgcctggccAA i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27717324 464 + 88276631 I e mm10.chr14 24160977 2191 + 124902244 I e calJac3.chr12 75555277 0 - 121768101 C a score=231686.000000 s hg38.chr10_KI270825v1_alt 64548 76 + 188315 AGTCAAGTTTTC-TTTTTAAAATATCTGCAGAGTGATTATCTGGAAGTAGTAAATTAATTTGTG-GTTTTTTCCTTAT s panTro4.chr10 76435240 76 + 133524379 AGTCAAGTTTTC-TTTTTAAAATATCTGCAGAGTGATTATCTTGAAGTAGTAAATTAATTTGTG-GTTTTTTCCTTAT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76105013 76 - 133410057 agtcaagtttTC-TTTTTAAAATATCTGCAGAGTGATTATCTTGAAGTAGTAAATTAATTTGTG-GTTTTTTCCTTAT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35046542 77 + 104879549 AGTCAAGTTTTCTTTTTTAAAATATCTGCAGAGTGATTATCTTGAAGTAGTAAATTAATTTGTG-GTTTTTTCCTTAT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73839717 77 - 130959383 agtcaagtttTC-TTTTTAAAATATCTGCAGAGTGATTATCTTGAAGTAGTAAATTAATTTGTGGTTTTTTTCCTTAT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75400815 77 - 133195287 agtcaagtttTC-TTTTTAAAATATCTGCAGAGTGATTATCTTGAAGTAGTAAATTAATTTGTGGTTTTTTTCCTTAT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73265588 77 - 125196307 agtcaagttttc-tttttaaaatatctgcagAGTGATTATCTTGAAGTAGtaaattaatttgtgttttttttccttat i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72097570 76 - 125710982 AGTCAAGTTTTC-TTCTTAAAATATATGCAGAGTGATTATCTTGAAGTAGTAAATTAATTTGTG-TTTTTTTCCTTAT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75555277 76 - 121768101 aGTCAAGTTTTC-TTTTTAAAATATCTGCAGAGTGATTATCTTCAAGTAGTACATTAATTTGTG-TTTTTTTCCTTAT i calJac3.chr12 C 0 C 0 e canFam3.chr4 27717324 464 + 88276631 I e mm10.chr14 24160977 2191 + 124902244 I a score=191712.000000 s hg38.chr10_KI270825v1_alt 64624 59 + 188315 AACATATCCACATTTAAAAAATTTTCATAGTGGCCATATAGCTTTTACACTCTGGCTCC s panTro4.chr10 76435316 59 + 133524379 AACATATCCACATTTAAAAATTTTTCATAGTGGCCATATAGCTTTTACACTCTGGCTCC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76105089 59 - 133410057 AACATATCCACATTTTAAAACTTTTCATAGTGGCCGTATAGCTTTTACACTCTGGCTCC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35046619 59 + 104879549 AACAAATCTACATTTTAAAAATTTTCATAGTGGCCATACAGCTTTTACACTCTGGCTCC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73839794 59 - 130959383 AACATATCCACATTTAAAAATTTTTCACAATGGCCATATAGCTTTGATACTCTGGCTCC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75400892 59 - 133195287 AACATATCCACATTTAAAAATTTTTCATAATGGCCATATAGCTTTGATACTCTGGCTCC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73265665 59 - 125196307 aacatatccacatttaaaaatttttcataatggCCATATAGCTTTGATACTCTGGCTCC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72097646 59 - 125710982 AACATATCCACATTTAAAAATTTTTCACAATGGCCATATAGTTTTTATACTCTGGCTCC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75555353 54 - 121768101 -----ATCCCCATTTTAAAAATTTTCATAGTGGCCATATTGCTTTTCCACTCTGCCTCC i calJac3.chr12 C 0 I 112 s canFam3.chr4 27717788 59 + 88276631 AACTTTTCCACATCTTAAAATTTTTCAAAATGGCCATATTGCTTTCAGATTCTGACATC i canFam3.chr4 I 464 C 0 e mm10.chr14 24160977 2191 + 124902244 I a score=13954.000000 s hg38.chr10_KI270825v1_alt 64683 7 + 188315 --CCAaaaa s panTro4.chr10 76435375 7 + 133524379 --CCAaaaa i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76105148 7 - 133410057 --CCAaaaa i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35046678 7 + 104879549 --Ccaaaaa i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73839853 7 - 130959383 --CCcaaaa i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75400951 7 - 133195287 --CCCaaaa i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73265724 7 - 125196307 --cccaaaa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72097705 7 - 125710982 --CCcaaaa i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27717847 7 + 88276631 CCCCCAA-- i canFam3.chr4 C 0 C 0 e mm10.chr14 24160977 2191 + 124902244 I e calJac3.chr12 75555407 112 - 121768101 I a score=998819.000000 s hg38.chr10_KI270825v1_alt 64690 302 + 188315 atctg-aaaaacattggcaaagatgtgaggcaatgagttcccc-----cacacactgcagggaggactgcaaaagccatgacctttttggagcaaagggggaagatctcgctggatgttaaacattcatgtcctctgacccagcaaaccccacccccaggaatgtaccccagggCACACTCC--TGGGTCCCTATGAAGTAGCATGTCAGTGGCCATGCAGCACGACACAGATGTAAGTAAGGGCAGAGATGCCCAGACTATCCCTCGGGAGGGACTGGTCAACAACTTAGGCTGCTGCCACTAAGGAAT s panTro4.chr10 76435382 302 + 133524379 atctg-aaaaacactggcaaagatgtgaggcaatgagttcccc-----cacacactgcagggaggactgcaaaagccatgacctttttggagcaaagggggaagatcaagctggatgttaaacattcatgtcctctgacccagcaaaccccacccccaggaatgtaccccagggCACACTCC--TGGGTCCCTATGAAGTAGCATGCCAGTGGCCATGCAGCACGACACAGATGTAAGTAAGGGCAGAGATGCCCAGACTATCCCTCGGGAGGGACTGGTCAACAACTTAGGCTGCTGCCACTAAGGAAT i panTro4.chr10 C 0 I 303 s ponAbe2.chr10 76105155 302 - 133410057 atctg-aaaaacattggcaaagatgtgaggcaatgagttcccc-----cacacactgcagggaggactgaaaaagccatgacctttttggagcaaagggggaagatctcactggatgttaaacattcataccctctgacccagcaaaccccacccccaggaatgtaacccagggcacactcc--taggtccctatgaaatagcacaccagtggccatgcagcacgacacagatgtaagtaagggcagagatgcccagactatccctcgggagggactggtcaacaacttaggctgctgccactaaggaat i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35046685 302 + 104879549 atctg-aaaaacactggcaaagatgtgaggcaatgagttcccc-----cacacactgcagggaggactgaaaaagccatcatctttttggagcaaagggagaagatctcactggatgttaaacattcatgccttctgacccagcaaaccccacccccaggaatgtaccccagggcacactcc--tgggtccctatgaagtggcacgccagtggccatgcagcacgacacagatgtaagtaaaggcagagatgcccggactatccctcgggagggactggtcaacgacttaggctgctgccactaaggaat i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73839860 292 - 130959383 atttgaaaaaacattggcaaagatgtgaggcaatgagttcccc-----tacacattgcagggaggactgaaaaagccatgacctttttggagcaaaggggatagatctcactggatgttaaacattcatgccctctgacccagcaaaccctcaccccaggaatgtaccccagggcacactcc--tgggtccctatga-----------agtggccatgcagcatgacacagatgtaaataaaggcagagatgcccagactatccctcgggagggactgatcaacagcttaggctgctgtcactaaggaat i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75400958 292 - 133195287 atttgaaaaaacattggcaaagatgtgaggcaatgagttcccc-----tacacattgcagggaggactgaaaaagccatgacctttttggagcaaaggggatagatctcactggatgttaaacattcatgccctctgacccagcaaaccctcaccccaggaatgtaccccagggcacactcc--tgggtccctatga-----------agtggccatgcagcacgacacagatgtaagtaaaggcagagatgcccagactatccctcgggagggactgatcaacagcttaggctgctgtcactaaggaat i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73265731 301 - 125196307 atctg-aaaaacactgGCAAAGATGTGAGGCAATGAGTTCCCC------ACACACTGCAGGGAGGACTGAAAAAGCCATGACCTTTTTGGAGCAAAGGGGGAAGATCTCACTGGATGTTAAACATTCATGCCCTCTGACCCAGCAAACCCTCACCCCAGGAATGTACCCCAGGGCACACTCT--TGGGTCCCTATGAAGCGGCACGCCAGTGGCCATGCAGCACGACACAGATGTAAGTAAAGGCAGAGATGCCCAGACTATCCCTCGGGAGGGACTGATCAACAGCTTAGGCTGCTGTCACTAAGGAAT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72097712 290 - 125710982 atctg-aaaaacactggcaaagatgtgaggcaatgagttcccc------acatgctgcagggaggactgaaaaagccatgacctttttggagcaaagggggaagatctcactggatgttaaacattcatgccctctgacccagcaaaccctcaccccaggaatgtaccccagggCACACTCC--TGGGTCCCTATGA-----------AGTGGCCACGCAGCACGACACAGATGTAAGTAAAGGCAGAGATGCCCAGACTATCCCTCGGGAGGGACTGATCAATAGCTTAGGCTGCTGTTACTAAGGAAT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75555519 304 - 121768101 ATCTG-AAAAACACtggcaaagatgtgaggcagtgagttccccttccacacacactgcagggaggactgaaaaagccatgatctttttggagcacagggggaagatttcattggatgtaaaacattcatgccctctgacccagcaaaccccaaccctaggaatataccccagggcacactcC--TGGGTCTCTAGGT---GGCATGCCAGTGGCCATGCAGCATGACACAGATGTAAGTAAAGGCAGAGATGCTCAGACTATCCCTTGGGAGGGACTGGTCAACAGCTTGGGCTGCTGCCACTAAGGAAT i calJac3.chr12 I 112 C 0 s canFam3.chr4 27717854 277 + 88276631 ATCTG-AAAAACATTGGCAAAGATGGGAAGCAATGAGCTCCCT-----CACACACCACAGGTAGGATCAAAAAGACCATGATTTCTTTGACCACACAGGGAAAGATCATGTCAAATATTAAATGCTGGTGCCCACTGATCCAGCAATCATCCCCC------------------GCACATTCCTGTGGGTCTCTGTGGAGGGATGTAGCAGCGGCCTTACAGCAC--------TGCTTGTAGAAGCAAAGATGACCTGACTGTCCACCGGG-GGAACCGGTTAACAGCTTGACTTGCTGCCACGAAGGAAT i canFam3.chr4 C 0 C 0 e mm10.chr14 24160977 2191 + 124902244 I a score=41487.000000 s hg38.chr10_KI270825v1_alt 64992 12 + 188315 GACACGCAGTTA s panTro4.chr10 76435987 12 + 133524379 GACACGCAGTTG i panTro4.chr10 I 303 C 0 s ponAbe2.chr10 76105457 12 - 133410057 gacacgcagtta i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35046987 12 + 104879549 gacatacagtta i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73840152 12 - 130959383 gacacgcagtta i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75401250 12 - 133195287 gacacgcagtta i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73266032 12 - 125196307 GACATGCAGTTA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72098002 12 - 125710982 GACACGCAGTTA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75555823 12 - 121768101 GACATGCAGTTA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27718131 9 + 88276631 ---ATGCAATTA i canFam3.chr4 C 0 I 46 e mm10.chr14 24160977 2191 + 124902244 I a score=3276.000000 s hg38.chr10_KI270825v1_alt 65004 1 + 188315 T s panTro4.chr10 76435999 1 + 133524379 T i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76105469 1 - 133410057 t i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35046999 1 + 104879549 t i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73840164 1 - 130959383 t i rheMac3.chr9 C 0 I 9 s macFas5.chr9 75401262 1 - 133195287 t i macFas5.chr9 C 0 I 4 s papAnu2.chr9 73266044 1 - 125196307 T i papAnu2.chr9 C 0 I 4 s chlSab2.chr9 72098014 1 - 125710982 T i chlSab2.chr9 C 0 I 9 s calJac3.chr12 75555835 1 - 121768101 T i calJac3.chr12 C 0 I 4 e canFam3.chr4 27718140 46 + 88276631 I e mm10.chr14 24160977 2191 + 124902244 I a score=2330.000000 s hg38.chr10_KI270825v1_alt 65005 6 + 188315 ATGCCT s panTro4.chr10 76436000 6 + 133524379 ATGCCT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76105470 6 - 133410057 atgcct i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35047000 6 + 104879549 atgcct i nomLeu3.chr18 C 0 C 0 s macFas5.chr9 75401267 5 - 133195287 ataac- i macFas5.chr9 I 4 C 0 s papAnu2.chr9 73266049 5 - 125196307 ATAAC- i papAnu2.chr9 I 4 C 0 s calJac3.chr12 75555840 6 - 121768101 ATGACC i calJac3.chr12 I 4 C 0 e canFam3.chr4 27718140 46 + 88276631 I e mm10.chr14 24160977 2191 + 124902244 I e chlSab2.chr9 72098015 9 - 125710982 I e rheMac3.chr9 73840165 9 - 130959383 I a score=1904266.000000 s hg38.chr10_KI270825v1_alt 65011 634 + 188315 TGGGGCAGATCTAAAGACGTGAATGTGggctgggcatggtggctcacacctgtaatcctagcacttcgggaggctgagggcagatcgtttgaggtcaggagttcaagaccagcctgggcaacatggtgaaacccccatctctactaaaaatac--aaaaaaactagcagggcgtgatggcacatgtctgtaatcccagctgctcaggtgg-----------------ctgaggcaggagaatcacttagacctgggaggcagaggctgcagtgagccaagatcacgccactgcactccagcctgggcaacagagtgagg--ctatctcaaacaaaaataaaaacaaaaa-------------------------gaCATGCTGCTAAAATCTggctgggcgtggtggctcacatctgtaatcccagcactttgagaggccaaggcaggtggatcacctgacgtcaggagctcgagaccaggctggccaaaatggcgaaaccccgtctctactaaaagtacaaaaattagctgggtgtggtggcgcatgcctgtaatctcagctacttgggaggctgaagcaggatagttacttgaacctgggaggcggaggctacagtgagcccagatcacaccattgtactccagcctgggcaacagagtgatactccatcttaaaaaa s panTro4.chr10 76436006 634 + 133524379 TGGGGCAGATCTAAAGATGTGAATGTGggctgggcatggtggctcacacctgtaatcctagcacttcgggaggctgagggcagatcatttgaggtcaggagttcaagaccagcctgggcaacatggtgaaacccccatctctactaaaaatac--aaaaaaactagcagggcgtgatggcacatgtctgtaatcccagctgctcaggtgg-----------------ctgaggcaggagaatcacttagacctgggaggcagaggttgcagtgagccaagatcacgccactgcactccagcctgggcaacagagtgagg--ctatctcaaacaaaaataaaaacaaaaa-------------------------gaCATGCTGCTAAAATCTggctgggcgtggtggctcacatctgtaatcccagcactttgagaggccaaggcaggtggatcacctgacgtcaggagctcgagaccaggctggccaaaatggcgaaaccccgtctctactaaaagtacaaaaattagctgggtgtggtggcgcatgcctgtaatcccagctacttgggaggctgaagcaggatagttacttgaacctgggaggcggaggctacagtgagcccagatcacaccattgtaccccagcctgggcaacagagtgatactccatcttaaaaaa i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76105476 674 - 133410057 tggggcagatctaaagatatgaatgtgggctgggcatggtggctcacacctgtaatcccagcacttcgggaggctgagggcagatcatttgaggtcaggagttcaagaccagcctgggcaacatggtgaaacccccatctct--taaaaatac--aaaaaaactagcagggcgtgatggcacatgtctgtaatcccagctgctcaggtggctgaggcaggagaatcactgaggcaggagaatcacttagacctgggaggcagaggttgcagtgagccaagatcatgccactgcactccagcctgggcaacagagtgaga--ctatctcaaacaaaaataaaaacaaaaagatatgaacatggagggacctccaggacatgttgctaaAATCTggctgggcgtggtggctcacatctgtaatctcagtactttgagaggccaaggcaggtggatcacctgatgtcaggagctcgagaccaggctggccaaaatggcgaaaccccgtctgtactaaaagtacaaaaattagctgggtgtggtggcacatgcctgtaatcccagctactcgggaggctgaagcaggatagttacttgaacctgggaggcggaggctacagtgagccaagatcacaccattgtactccagcctgggcaacagagtgatactccatcttaaaaaa i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35047006 659 + 104879549 tggggcagatctaaagatgtgaatgtgggctgggcatgatggctcacacctgtaatcccagcacttcgggaggctgagagcagatcattcgaggtcaggagtttaagacaagcttgggcaacatggtgaaacccccatctttactaaaaatacaaaaaaaaactaaca-ggcgtgatggcccatgtctgtaatcccagctg-tcaggtgg-----------------ctgaggcaggagaatcacttggacctgggaggcagaggttgcagtgagccaagatcatgccactgcactccagcctgggcaatagagtgaga--ctatctcaaacaaaaataaaaacaaaaagatatgaatatggagggacctccaggacatgctgctaaaatctggctgggcgtggtggctcacatctgtaatcccagcactttgagaggccaaggcaggtggatcacctgacgtcaggagctcgaaaccaggctggccaaaatggcgaaaccccgtctctgctaaaaatacaaaaattagctgggtgtggtggcgcatgcctataatcccagctactcgggaggctgaagcaggatagttacttgaacctgggaggcagaggctacagtgagccaagatcacaccattgtacttcagcctgggtgacagagtgatactccatcttaaaaaa i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73840174 659 - 130959383 caaggtagatctaaagacgtgaatataggctgggcatggtggttcacacctgaaatcccagcactttgggaggctaagggcagatcatttgaggtcaggagttcaagaccagcctgggcaacatggtgaaacccccatctctaccaaaaatac--aaaaaaactagcacggcttggttgcacaggtctgtaatcccagctgctcaggtgg-----------------ctgaggcaggagaatcacttggacctgggaggcagaggttgcagtgagtcaagatcatgcccctgcactccagtctgggcaatagagtgaga--ctatctcaaacaaaaataaaaataaaaagatatgaatacggagggacctccaagacatgctgctaaaatctggctgggtgtggtggctcacatctgtaatcccagcacttggaaaggccaaggcaggtggatcacttgaggtcaggagtttgagaccagcctggccaacatggcgaaaccccatctctactaaaaatacaaaaattagctgggtgtggtggcatgtgcctgtaatcccagctacttgggaggctgaagcaggataatcacttgaacctgagaggcggaggctacagtcagccaagatcacaccattggactccagcctgggcaacagagtgacactccatcttaaaaaa i rheMac3.chr9 I 9 C 0 s macFas5.chr9 75401272 659 - 133195287 caaggtagatctaaagacgtgaatataggctgggcatggtggttcacacctgaaatcccagcactttgggaggctaagggcagatcatttgaggtcaggagttcaagaccagcctgggcaacatggtgaaacccccatctctaccaaaaatac--aaaaaaactagcagggcttggtggcacaggtccgtaatcccagctgctcaggtgg-----------------ctgaggcaggagaatcacttggacctgggaggcagaggttgcagtgagccaagatcatgccactgcactccagtctgggcaatagagtgaga--ctatctcaaacaaaaataaaaataaaaagatatgaatacggaaggacctccaagacatgctgctaaaatctggctgggtgtggtggctcacatctgtaatcccagcacttggaaaggccaaggcaggtggatcacttgaggtcaggagtttgagaccagcctggccaacatggcgaaaccccgtctctactaaaaatacaaaaattagctgggtgtggtggcatgtgcctgtaatcccagctacttgggaggctgaagcaggataatcacttgaacctgagaggcggaggctacagtcagccaagatcacaccattggactccagcctgggcaacagagtgacactccatcttaaaaaa i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73266054 659 - 125196307 CAAGACAGATCTAAAGACGTgaatatgggctgggcatggtggttcacacctgtaatcccagcactttgggaggctaagggcagatcatttgaggtcaggagttcaagaccagcctgggcaacatggtgaaacccccatctctaccaaaaatac--aaaaaaactagcagggcttggtggcacaggtctgtaatcccagctgctcaggtgg-----------------ctgaggcaggagaatcacttggacctgggaggcagaggttgcagtgagccaagatcatgccactgcactccagtctgggcaatagagtgaga--ctatctcaaacaaaaataaaaataaaaagatatgaatATGGAGGGACCTCCAAGACATGCTGCTAAaatctggctgggtgtgatggctcacatctgtaatcccagcacttggaaaggccaaggcaggtggatcacttgaggtcaggagttcgagaccagcctggccaacatggcgaaaccccgtctctactaaaaatacaaaaattagctgggtgtggtggcatgtgcctgtaatcccagctacttgggaagctgaagcaggataatcacttgaacctgagaggcggaggctacagtcagccaagatcacaccattggactccagcctgggcaacacagtgacactccatcttaaaaaa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72098024 659 - 125710982 CAAGGCAGATCTAAAGACGTGAATATGggctgggcatggtggttcacacctgtaatcccagcactttaggaggctaagggcagatcatttgaggtcaggagttcaagaccagcctgggcaacatggtgaaacccccatctctaccaaaaatac--aaaaaaactagcagggcttggtggcacaggtctgtaatcccagctgctcaggtgg-----------------ctgaggcaggagaatcacttggacctgggaggcagaggttgcagtgagccaagatcatgccactgcactccagtctgggcaacagagtgaga--ctatctcaaacaaaaataaaaataaaaagaTATGAATATGGAGGGACCTCCAAGACATGCTGCTAAAATCTggctgggtgtggtggctcacatctgtaatcccagcacttggaaaggccaaggcaggtggatcacttgaggtcaggagttcgagaccagcctggccaacatggcaaaaccccatctctactaaaaatacaaaaattagctgggtgtggtggcatgtgcctgtaatcccagctacttgggaggctgaagcaggataatcacttgaacctgagaggcggaggctacagtcagccaagatcacaccattggactccagcctgggcaacagagtgacactccatcttaaaaaa i chlSab2.chr9 I 9 I 309 s calJac3.chr12 75555846 620 - 121768101 -TAGGCAGATCTAAAGATGTGAATACAGGCTG---Acggtggctcacgcctgtaatcccagcactttgggaagctgagggcagatcatctgaggtcaggagtacgagaccagcctgggcagcatggtgaaa-ccctgtctctactaaaaatac--aaaaaaattagcagggtgtggtggcatatgtctgtaatcccagctgctcaggtgg-----------------ctgaggcaggagaattgcttggacctgggaggcagaggttgcagtgagccgagatcgtgccactgcattccag-ctgggcaatagagtgatactctatctcaaacaaaaat------aaaaaGATATGCATATGGAAGGACCTGCAGGACATGCAGCTAAAATCTAgctgggcgtggtggctcatgccagtaatcccagtactttaagaggccaaggcaggt-gatcacctgaggtcaggagtttgaaaccagcctggccaacatggtgaaaccctatctttactaaaaa----------------------------atgcctataatctcagctacttgggaggctgaagcaggagaatggcttgaacatgggaagcggaggctgcaatgagccgagatcgcaccattgcactccagcctgggtggcaaagcgatactctgtcttaaaaaa i calJac3.chr12 C 0 C 0 e canFam3.chr4 27718140 46 + 88276631 I e mm10.chr14 24160977 2191 + 124902244 I a score=35705.000000 s hg38.chr10_KI270825v1_alt 65645 17 + 188315 taataataaaaaca--------aaa s panTro4.chr10 76436640 17 + 133524379 taataataaaaata--------aaa i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76106150 17 - 133410057 taataataaaaata--------aaa i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35047665 17 + 104879549 taataataaaaata--------aaa i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73840833 22 - 130959383 ---taataaaaataataaaaataaa i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75401931 22 - 133195287 ---taataaaaataataaaaataaa i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73266713 22 - 125196307 ---taataaaaataataaaaataaa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72098992 25 - 125710982 taataataaaaataataaaaataaA i chlSab2.chr9 I 309 C 0 s calJac3.chr12 75556466 17 - 121768101 tagtaagaaaaatg--------aaa i calJac3.chr12 C 0 C 0 e canFam3.chr4 27718140 46 + 88276631 I e mm10.chr14 24160977 2191 + 124902244 I a score=761983.000000 s hg38.chr10_KI270825v1_alt 65662 244 + 188315 acaaaaaGCAAGATGAGCAACTGAGTATATTATAATCCCATCCAGGTTACCTCAACCCCCCAAAAATGTGTGAGATGTACATGTTTTGAAAGTGTCTGGGACATAATATAATAAATTGTTAACAGTGATTGCCATCGGGGTGGGAAGCAGTACACAAGAGGTCTAGCCAGAGGAAGATTTGTTGTCACGATTTGCCTTTTGTACTACTGGAATTTTGTATGTATGCCATGAAAAAGTGTATGGC s panTro4.chr10 76436657 244 + 133524379 acaaaaaGCAAGATGAGCAACTGAGTATATTATAATCCCATCCAGGTTACCTCAACCCCCCAAAAATGTGTGAGATGTACATGTTTTGAAAGTGTCTGGGACATAATATAATAAATTGTTAACAGTGATTGCCATCGGGGTGGGAAGCAGTACACAAGAGGTCTAGCCAGAGGAAGATTTGTTGTCACGATTTGCCTTTTGTACTACTGGAATTTTGTATGTATGCCATGAAAAAGTGTCTGGC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76106167 243 - 133410057 acaaaaaGCAAGATGAGCAACTGAGTATATTATAATCCCATCCAGGTTACCTCAACCCCCCAAAAATGTGTGAGATGTACATGTTTTGAAAGTATCTGGGACATAATATAATAAATTGTTAACAGTGATTGCCATCAGGGTGGGAAGCAATACACAAGAGGTCTAGCCAGA-GAAGAGTTGTTGTCACTATTTGCCTTTTGTACCTTTGGAATTTTGTATGTATGCCATGAAAAAGTGTATGGC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35047682 238 + 104879549 acaaaaagcaagatgagcaactgagtatattataatcccatctgggttacttcaaccccccaaaaatgtgtgag------atgttttgaaagtgtctgggacataatataataaattgttaacagtgattgccatcggggtgggaagcagtacgcaagaggtctagccagaggaagagttgttgtcgctatttgccttttgtactattggaattttgTATGTATGCCATGAAAAAGTGTATGGC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73840855 244 - 130959383 acaaaaagcaagatgagcaattgagtatattataatcccatagaggttaccccaaccccccaaaaatgtgtgagatgtacatgttttgaaagtttctgggacataatataataaattgttaacagtgattgccatcggggtgggaaatagtacacaagaggtctagccagaggaagagttgttgtcactatttgccttttgtactattggaattttgTATGTATGCCATGAAAAAGTGTATGGC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75401953 241 - 133195287 acaaaaagcaagatgagcaattgagtatattataatcccatagaggttaccccaaccccccaaaaatgtgtgagatgtacatgttttgaaagtttctgggacataatataataaattgttaacagtgattgccatcggggtgggaagtagtacacaagaggtctagccagaggaaga---gttgtcactatttgccttttgtactattggaattttgTATGTATGCCATGAAAAAGTGTATGGC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73266735 244 - 125196307 acaaaaagcaagatgAGCAATTGAGTATATTATAATCCCATACAGGTTACCCCAACCCCCCAAAAACATGTGAGATGTACATGTTTTGAAAGTTTCTGGGACATAATATAATAAATTGTTAACAGTGATTGCCATCGAGGTGGGAAGTAGTACACAAGAGGTCTAGCCAGAGGAAGAGTAGTTGTCACTAGTTGCCTTTTGTACTATTGGAATTTTGTATGTATGCCATGAAAAAGTGTAtggc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72099017 244 - 125710982 ACAAAAAGCAAGATGAGCAATTGAGTATATTATAATCCCACACAGGTTACCCCAACCCCCCAAAAATGTGTGAGATGTACATGTTTTGAAAGTTTCTGGGACATAATATAATAAATTGTTAACAGTGATTGCCATCGGGGTGGGAAGTAGTACACAAGAGGTCTAGCCAGAGGAAGAGTTGTTGTCACTATTTGCCTTTTGTACTACTGGAATTTTGTATGTATGCCATGAAAAAGTGTATGGC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75556483 240 - 121768101 acaaaaaGCAAGATGAGCAACTGAGTATATTATAATCCCATCCAGGTTACCCCAAACCCCCAAAAATGTGTGAGATGTCCATGTTTTGAAAGTTTCTAGGACATAATATAATAAACTGTTAACAGTAATTGCCATCAGGGTGGGAAGTAGTAGACAAGGGGTCTAGCCAGAGGAAGAGTTAGTGTCACTATTTGCCTTTTGTATTACTGGAATTTTGTACATATGCCATGAAAAAG----TGGC i calJac3.chr12 C 0 C 0 s canFam3.chr4 27718186 170 + 88276631 ACAAAAGATGAGGTTAGCAGCTGAGTATATTATGATCCCA------------------------------------------------------TCTGGGGGAAAACAgaaggaagggaggaagg-----------gaggaaggaaggaaggaaAAAGTGG--------GAGGGACACGTGTTTGTCGTGTGTG-CTTCTGTACAACTGGGATTTTGTGTGTGTGCTGGGGGAAAGGGTGTGAC i canFam3.chr4 I 46 C 0 e mm10.chr14 24160977 2191 + 124902244 I a score=656844.000000 s hg38.chr10_KI270825v1_alt 65906 224 + 188315 ATTTTCAGtttttgttttttattta-----ttagagacaggagtcttgctctgtcacccaggctagagtgcagtggcgcgatctcggctcactgcaacctctgcctcccaggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcacccaccaccaagcccggctaatttttgtattttt--agtaaagacagggtttcaccacgttccccaggc s panTro4.chr10 76436901 224 + 133524379 ATTTTCAGtttttgttttttattta-----ttagagacagaagtcttgctctgtcacccaggctagagtgcagtggcgcgatctcggctcactgcaacctctgcctcccaggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcacccaccaccaagcccggctaatttttgtatttgt--agtaaagacagggtttcaccacgttccccaggc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76106410 220 - 133410057 ATTTTCAGtt----ttttttattta-----ttagagacaggagtcttgctctctcacccaggctagagtgcagtggcgcgatctcggctcactgcaacctctgcctcccaggttcaagtgattctcctgcctcagcctcccgagtagctgggatgacaggcacccaccaccaagcccggctaatttttgtattttt--agtaaagacagggtttcaccacgttgcccaggc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35047920 223 + 104879549 ATTTTCAGtttttgttttttattta-----ttagagacaagagtcttgctctgtcacccaggctagagtgcagtggcgtgatctcggctcactgcaacctttgcctcccaggttcaagtgattctcctgcctcagccttccgagtagctgggatgacaggcacccaccatcaagcccggctaatttttgtattttt--agtaaagacagggtttcaccatgttgccca-gc i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73841099 224 - 130959383 ATTTTCAGtttttagtttttattta-----ttagagacaggagtcttgctctgtcacccaggctagagggcagtggtgtgatctcagctcactgcaacctctgcctcccaggttcaagtgattctcctgcctcagcctcccgagtagctgggatgacaggcacccaccaccaagcccggctaatttttgtattttt--agtaaagacagggtttcaccatgttgcccaggc i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75402194 226 - 133195287 ATTTTCAGtttttagtttttattta-----ttagagacaggagtcttgctctgtcacccaggctagagggcagtggtgtgatctcagctcactgcaacctctgcctcccaggttcaagtgattctcctgcctcagcctcacgagtagctgggactacaggaacacaccaccatgcccggttaatttttgtattttttaagtagacatggggttttatcatgttggccaggc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73266979 224 - 125196307 attttcagtttttattttttattta-----ttagagacaggagtcttgctctgtcacccaggctagagggcagtggtgtgatctcagctcactgcaacctctgcctcccaggttcaagtgattctcctgcctcagcctcccaagtagctgggctgaTAGAcatccaccaccaagcccggctaatttttgtattttt--agtaaagacagggtttcaccatgttgcccaggc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72099261 224 - 125710982 ATTTTCAGtttttattttttattta-----ttagagacaggagtcttgctctgtcacccaggatagagggcagtggtgtgatctcagctcactgcaacctctgcctcccaggttcaagtgattctcctgcctcagcctcccgagtagctgggctgacaggcacccaccaccaagcccggctaatttttgtattttt--agtaaagacagggtttcaccatgttgcccaggc i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75556723 228 - 121768101 ATTTTCAGtt-ttattttttatttatgtactttaagacaggagttttgctctgtggcccaggctggagggcagtggtgtgatctcgacttactgcaacctccgtctcctaggttcaagcgattctcctgtctcaccctcccaaggtgctgggattacaggtgcccaccaccatgcccagctaatttttgtattttt--agtagagacagggtatcaccatgttggccaggc i calJac3.chr12 C 0 I 526 e canFam3.chr4 27718356 0 + 88276631 C e mm10.chr14 24160977 2191 + 124902244 I a score=258117.000000 s hg38.chr10_KI270825v1_alt 66130 93 + 188315 tggtctcgaactccctacctcaggtgatccacccacctcggcctcccaaagtgccatgattacgggcgtgagccaccgtgccccgcTGGCATT s panTro4.chr10 76437125 93 + 133524379 tggtctcgaactccctatctcaggtgatccacccacctcggcctcccaaagtgccatgattacgggcgtgagccaccatgcccCACTGGCATT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76106630 93 - 133410057 tggtcttgaactccctacctcaggtgatccacccacctcggcctcccaaagtgccatgattacgggcgtgagccaccgtgcccCACTGGCATT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35048143 93 + 104879549 tggtctcgaactccctacctcaggtgatccacctgccttggcctcccaaagtgccatgattacgggagtgagccaccgtgcccCACTAGCATT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73841323 93 - 130959383 tggtcccgaactcccgacctcaggtgatccacccacctcagccttccaaagtgctgggattacaggagtgagccactgcgccctgcTGGCATT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75402420 93 - 133195287 tggtctcgaactcttgacctcaggtggtcaacccacctcagcctcccaaagtactgggattacaggcctgagccactgcgccctgcTGGCATT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73267203 93 - 125196307 tggtcccgaactcctgacctcaggtgatccatccacctcagcctcccaaagtgctgggattacaggagtgagccaccgcgccctgctggcatt i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72099485 93 - 125710982 tggtcccgaactcccgacctcaggtgatccacccacctcagcctcccaaagtgctgggattacaggagtgagccactgtgccctgcTGGCATT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75557477 93 - 121768101 tggtcttgaactcatgaccacaggtgatccacctgccttggcctcccaaggtgcagggattacaggcgtgaggcaccacaccccgcTGGCATT i calJac3.chr12 I 526 C 0 e canFam3.chr4 27718356 0 + 88276631 C e mm10.chr14 24160977 2191 + 124902244 I a score=371932.000000 s hg38.chr10_KI270825v1_alt 66223 116 + 188315 TTCAATTTTAAAAG----GTCAGaagtattaaatttgcatgtcctatgactcagcaatctcacggcattt--gtagcttagtc-tcagagataccattacatgtctccagaggctctgtgcac s panTro4.chr10 76437218 116 + 133524379 TTCAATTTTAAAAG----GTCAGaagtattaaatttgcatgtcctatgactcagcaatctcatggcattt--gtagcttagtc-tcagagataccattacgtgtctccagaggctctgtgcac i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76106723 116 - 133410057 TTCAATTTTAAAAG----GTCAGAAGTattaaatttgcatgtcctatgactcagcaatctcacggcattt--gtagcttagtc-tcagagataccattacgtgcctccagagggtctgtgtac i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35048236 116 + 104879549 TTCAATTTTAAAAG----GTCAGaagtattaaatttgcatgtcctatgactcagcaatctcacggcattt--gttgcttagtc-tcagagataccattacgtgtctccagagggtctgtgcac i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73841416 120 - 130959383 TTCAattttaaaaggttagttagaagtattaaatttgcatgtcctatgatttagcaatctcatggcattt--gtagctcagtc-tcagagataccattaggtgtctccagagggtctatgcac i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75402513 120 - 133195287 TTCAATTTTAAAAGGTTAGTTAGaagtattaaatttgcatgtcctatgactcagcaatctcatggcattt--gtagctcagtc-tcagagataccattaggtgtctccagagggtctatgcac i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73267296 120 - 125196307 ttcagttttaaaaggttAGTTAGAAGTATTAAATTTGCATGTCctatgactcagcaatctcatGGCATTT--GTAGCTCAGTC-TCAGAGATACCATTAGGTGTCTCCAGAGGGTCTATGCAC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72099578 120 - 125710982 TTCAGTTTTAAAAGGTTAGtcagaagtattaaatttgcatgtcctatgactcagcaatctcatggcattt--gtagctcagtc-tcagagataccattaggtgtctccagagggtctatgcac i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75557570 117 - 121768101 T---ATTTTAAAAGGTTAGTTAGAAGTATTAAGTTTGcatgtcctatgattcagcagtctcacagcattt--gtagcttagcc-ccagagctaccattaggtgtctccaaagtggctgtgcac i calJac3.chr12 C 0 C 0 s canFam3.chr4 27718356 106 + 88276631 TTCAACTTTAATGAGTCAGTTAGAAATACTAATTT-----------AGACTCAGTAATCTCACAGCATTTTGGGGGCTTGGTCACCAGGGATGCCATTGGGTGTCCCCAAAAGGGAC------ i canFam3.chr4 C 0 C 0 e mm10.chr14 24160977 2191 + 124902244 I a score=1302654.000000 s hg38.chr10_KI270825v1_alt 66339 402 + 188315 acaggtaaagttcaatgcaggactgtttgcaattgcagaccctgaaaacaactt-ctatgtccatcaatag-gtggataatttaaactacatataatcaaacaacagaataccataaggtg-----ggtaacattagccaggctacacttggaaagatatc--caagGTAGGATGCGAATTGCAGATCCCATTAC-TGTACATAAATAAGCAAAACAACA--CCAAGAAATCTATCTAGGTATATATAGATTTGTAGGGGCACATATGGTTTGGGCTGAGTGCTTATCTTCTAAATGGGGGCAGGG----ACAATCTCtaggagcaggattaaagggggaagaaagggactgccacttttcactttacata-----tttttatattgcttggctgttttacaacaaacaggacttactttggt s panTro4.chr10 76437334 401 + 133524379 acaggtaaagttcaatgcaggcctgtttgcaattgcagaccctgaaaacaactt-ctatgtccatcaatag-gtggataatttaaactacatataatcaaacaacagaataccataaggtg-----ggtaacattagccaggctacacttggaaagatatc--caagGTAGGATGCAAATTGCAGATCCCATTAC-TGTACATAAAT-AGCAAAACAACA--CCAAGAAATCTATCTAAGTATATATAGATTTGTAGGGGCACATATGGTTTGGGCTGGGTGCTTATCTTCTAAATGGGGGCAGGG----ACAATCTCtaggagcaggattaaagggggaagaaagggactgccacttttcactttacata-----tttttatattgcttggctgttttacaacaaacaggacttactttggt i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76106839 401 - 133410057 acaggtaaagttcaatgcaggactgtttgcaattgcagaccctgaaaacaactt-ctatatccatcaatag-agggaaattttaaactatatataatcaaacaacagaataccatAAGGTG-----GGTAACATTAGCCAGTCTACACTTGGAAAGATATC--CAAGGTAGGATGCAAATTGCAGATCCCATTAC-TGTACATAAAT-AGCAAAACAAAA--CCAAGAAATCTATCTAGGTATGTATAGATTTGTAGGGGCACATATGGTTTGGGCTGGGTGCTTATCTTCTAAATGGGGGCAGGG----ACAATCTCTAGGAGCAGGATTAAAGGGGGAAGAAAGGGATTGCCACTTTTCACTTTACATA-----TTTTTGTACTGCTTGGCTATTTTACAACAAACAGGACTTACTTCGGT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35048352 401 + 104879549 acaggtaaagttccatgcaggactgtttgcaattgcagaccctgaaaacaactt-ctacgtccatcaatag-ggggataatttaaactatatataatcaaacaacagaataccataaggtg-----ggtaacattagccaggctacacttggaaagatatc--caaggtaggatgcaaattgcagactccattac-ggtacataAAT-AGCAAAACAAAA--CCAAGAAATCTGTCTAGGTATATTTAGATTTGTAGGGGCACATATGGTTTGGGCTGGGTGCTTATCTACTAAATGGGGGCAGGG----ACAATCTCtaggagcaggattaaagggggaagaaagggactgccacttttcactttacata-----tttttgtattgcttggctattttacaacaaacaggacttgctttggt i nomLeu3.chr18 C 0 I 148 s rheMac3.chr9 73841536 395 - 130959383 acaggtaaagttaaatgcaggactgtttgcaattgcagaccctgcaaacaactt-ctatgtccatcgggggaggggataatttatactacatataatcaaacaacagaataccataaggtg-----ggtaacattagccaggctagacttggaaagatatc--caagGTAGGATGCAAATTGCAGATCCCATTAT-TGTACATAAAT-AGCAAAACAAAA--CCAAGAAATCTATCTAGGTATATATAGATTTGTGGGGGCACTTATG---TGGGCTGGGTACTTATCTTCCAAATGGGGGCAGGG----ACAATCTCtaggagcaggattaaaggggg----aagggactgccacttttcattttacata-----tttttgtattgcttggctattttacaacaaataggacttactttggt i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75402633 395 - 133195287 acaggtaaagttaaatgcaggactgtttgcaattgcagaccctgcaaacaactt-ctatgtccatcgggggaggggataatttatactacatataatcaaacaacagaataccataaggtg-----ggtaacattagccaggctagacttggaaagatatc--caagGTAGGATGCAAATTGCAGATCCCATTAT-TGTACATAAAT-AGCAAAACAAAA--CCAAGAAATCTATCTAGGTATATATAGATTTGTAGGGGCACTTATG---TGGGCTGGGTACTTATCTTCCAAATGGGGGCAGGG----ACAATCTCtaggagcaggattaaaggggg----aagggactgccacttttcattttacata-----tttttgtattgcttggctattttacaacaaataggacttactttggt i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73267416 392 - 125196307 ACAGGTAAAGTTAAATGCAGGACTGTTTGCAATTGCAGACCCTGCAAACAACTT-CTATGTCCATCAGG---GGGGATAATTTATACTACATATAATcaaacaacaaaataccataaggTG-----GGTAACATTAGCCAGGCTAGACTTGGAAAGATATC--CAAGGTAGGATGCAAACTGCAGATCCCATTAT-TGTAcataaat-agcaaaacaaaa--ccaagaaatctATCTAGGTATATATAGATTTGTAGGGGCACTTATG---TGGGCTGGGTACTTATCTTCCAAATGGGGGCAGGG----ACAATCTCTAGGAGCAGGATTAAAGGGGG----AAGGGACTGCcacttttcattttacata-----tttttgtattgctTGGCTATTTTACAACAAATAGGACTTACTTTggt i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72099698 392 - 125710982 acaggtaaagttaaatgcaggactgtttgcaattgcagacgctgcaaacaactt-ctatgtccatcggg---ggggataatttatactacatataatcaaacaacagaataccataaggtg-----ggtaacattagccaggctagacttggaaagatatc--caaCGTAGGATGCAAATTGCAGATCTCATTAT-TGTACATAAAT-AGCAAAACAAAA--CCAAGAAATCTATCTAGGTATATATAGATTTGTAGGGGCACTTATG---TGGGCTGGGTACTTATCTTCCAAATGGGGGCAGGG----ACAATCTCtaggagcaggattaaaggggg----aagggactgccacttttcattttacata-----tttttgtattgcttggctattttacaacaaataggacttactttggt i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75557687 385 - 121768101 acaggtgaagctcactgcaggactgtttgcaactgccgaccctgaaaacaactt-ctaagtccatcaatag-ggggataatttaaactatacataattacacaacagaataccatAAGGTG-----GGTAACATTAGCCAGGCTGGACTTAGAAAGATGTCAACATAATAGGATGCAAATTGCAGATCCCATTAT-TGTACATAAAT-AGCAAAA----------------CTATC----CATAGATAGATTTCTAGGGGCACTTATGGTTTGGGCTGGGTGCTTATCTTCCAAATGGGGGCAGTG----ACAATCTCCAGGAGCAGAACTAAAAGGGGAAGAGAGGGACTGTCACTTTTCACTTTACGTA-----TTTTTGCATTGCTTGGCTATTTTACAACAAATAGGACTTACTTTGGT i calJac3.chr12 C 0 C 0 s mm10.chr14 24163168 384 + 124902244 ACAGGGAAGGCTCACGGCGGGACCTGGGACCACAGCAGA---TGGTGATGACGG-CTATGTCATGCAA----GGAGGCAGTTTTACGTATGCATAACCAAGCAGCCCAGCCTCGTGAGGTGAGGTAGGTACCATTAGTAAGGACAGACTGAGAAAGCACTG--TGACACAGAATGCAAACTGCAGATCCCACTGT-TGTGTTTAAAC-A-CAGAGCTAGAGCCCTAGACGTCT-----------TCTAGTCTTACTTGAGCACTCGAGGTCTGGGCTGGA---ACACCTTCCATGTGGGGACA---------AATCTCTAGGAGTGAATTCAAAACAGA---AGGGGAAACACTACTTTTTGCTCTATGTGGTTTTTTTTTTAACCATGTGACTATTTTATAGCAAAGAGATTTTATGTTGGT i mm10.chr14 I 2191 I 8 s canFam3.chr4 27718462 380 + 88276631 --ACATGAAGTTTATGGCAAGACTATCTGCAATGGCGGAAACTGAAGACAACGTATTACGTGCACAAGG---AGGGAAGCTTTCAACTA---------------CAGATCACCACGAGGTT-----GATAAACATAATGAGGCTCACTTTGGAAAGATAAC--CATGATGTGGAATAGCAGGCTGATACCACTATCTATATCTTAAA-AAGCAAACAAAA--CCCAGGAAGCTTTATCTGTGTATGTCAATTTGTATGAGCACTCATGGTCT-GGCTAGAAGCACTTCTTGCAACTGGGGGCAGAGCTTTGTTTTCTCCAGGGATAGGATTAAAGGGGAAAAGCGGGGATTACCACTT-------TACATA-----TTTTTATATTGAATGAATATTTTATGGCATGTAAGTCTTACTCTGGT i canFam3.chr4 C 0 C 0 a score=110219.000000 s hg38.chr10_KI270825v1_alt 66741 42 + 188315 ----aacaaaaaaaTTTA--AAAATAAGTA----TTACATTTAGTT-AAAAAA s panTro4.chr10 76437735 43 + 133524379 ----aacaaaaaaaTTTA--AAAATAAGTA----TTACATTTAGTTAAAAAAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76107240 41 - 133410057 ----AACAAAAAAATTTA--AAAATAAGTA----TTACATTTAGTT--TAAAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35048901 41 + 104879549 ----AACAAAAAAATTTA--AAAATAAGTA----TTACATTTAGTT--AAAAA i nomLeu3.chr18 I 148 C 0 s rheMac3.chr9 73841931 43 - 130959383 ----aacaaaaaaaTTTA--AAAATAGGTA----TTACATTTAGTTTTTTTAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75403028 43 - 133195287 ----aacaaaaaaaTTTA--AAAATAGGTA----TTACATTTAGTTTTTTTAA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73267808 43 - 125196307 ----aacaaaaaaattta--aaaataggta----ttacatttagtttttttaa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72100090 41 - 125710982 ----aac--aaaaaTTTA--AAAATAGGTA----TTACATTTAGTTTTTTTAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75558072 42 - 121768101 ----AACAAACAAAATTA--AAAATAGGTA----TTACAGTTAGTT-AAAAAA i calJac3.chr12 C 0 C 0 s mm10.chr14 24163560 44 + 124902244 ----AAAAAAAAAAGCTAATAGAGTAGGCA----TACTGTTCAGTA-AAAAAA i mm10.chr14 I 8 I 200 s canFam3.chr4 27718842 50 + 88276631 Gattaaaaagtaaatata--aaaataaatggatctaatgtttaatt-acaaaa i canFam3.chr4 C 0 C 0 a score=549686.000000 s hg38.chr10_KI270825v1_alt 66783 193 + 188315 AAAGGGGTGGCATTTAAAAGTCACAACACAATGATGTCAATTTTTT-TAATTGTCCTTGATAAACATTCATGAGAATGTTAAATGTAGA-----GAACTAC-ATTTAAAATGTTAATAAAgctgggtg-ctgtggatcatgcctgtaatcccagaactttgggaagccaaggcgggcagatcacctgaggtcaggagttca s panTro4.chr10 76437778 193 + 133524379 AAAGGGGTGGCGTTTAAAAGTCACAACACAATGATGTCAATTTTTT-TAATTGTCCTTGATAAACATTCATGAGAATGTTAAATGTAGA-----GAACTAC-ATTTAAAATGTTAATAAAgctgggtg-ctgtggatcatgcctgtaatcccagaactttgggaagccaaggcgggcagatcacctgaggtcaggagttca i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76107281 193 - 133410057 AAAGGGGTGGCGTTTAAAAGTCACAACACAATGATGTCAATTTTTT-TAATTGTCCTTGATAAACATTCATGAGAATGTTAAATGTAGA-----GAACTAC-ATTTAAAATGTTAATAAagctgggcg-ctgtggatcatgcctgtaatcccagaactttgggaagccaaggcaggcagatcacctgaggtcagtagttca i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35048942 193 + 104879549 AAAGGGGTGGTGTTTAAAAGTCACAACACAATGATGTCAATTTTTT-TAATTGTCCTTGATAAACATTCATGCGAATGTTAAATGTAGA-----GAACTAC-ATTTAAAATGTTAATAAAgctaggtg-ctatggatcatgcctgtaatcccagaactttgggaagccaaggcgggcagatcacctgaggtaaggagttca i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73841974 193 - 130959383 AAAAGGGTCGTGTTTAAAAGTCACAACACAATGATGTCAATTTTTT-AAACTGTCCTTGATAAACATTCATGAGAATGTTAAATGTAGA-----GAACTAC-ATTTAAAATATTAATAAAgctgggcg-ctgtggcccatacctgtaatcccagcactttgggaagccaaggcgggcagatcacctgaggtaaggaattcg i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75403071 193 - 133195287 AAAAGGATCGTGTTTAAAAGTCACAACACAATGATGTCAATTTTTT-AAACTGTCCTTGATAAACATTCATGAGAATGTTAAATGTAGA-----GAACTAC-ATTTAAAATATTAATAAAgctgggcg-ctgtggcccatacctgtaatcccagcactttgggaagccaaggcgggcagatcacctgaggtaaggaattcg i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73267851 191 - 125196307 aaaagggtcgTGTTT--AAGTCACAACACAATGAtgtcaatttttt-aaactgtCCTTGATAAACATTAATGAGAACGTTAAATGTAGA-----Gaactac-atttaaaatgttaataaagctgggcg-ctgtggcccatacctgtaatcccagcactttgggaagccaaggcgggcagatcacctgaggtcaggaattcg i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72100131 193 - 125710982 AAAAGGGTCGTGTTTAAAAGTCACAACACAATGATGTCAATTTTTT-AAACTGTCCTTGATAAACATTCATGAGAATGTTCAATGTAGA-----GAACTAC-ATTTAAAATGTTAATAAAgctgggcg-ctgtggcccatacctgtaatcccagcactctgggaagccaaggcgggcagatcacctgaggtcaggaattcg i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75558114 199 - 121768101 AAATGTTGGGGGTTTAAAAGTCACAACACAATGATTTCAATTTTTTAAAATTGTCCTTAATAAACATTCATAAGAATGTTAAATGTAAGAGAACAAACTAC-ATTTAAAATGTTAATAAAgctgggtg-aagtggctcacacgtgtaatcctagcactttgggaggccaaggcaggcaaatcacctgaggttgggagttcg i calJac3.chr12 C 0 C 0 s canFam3.chr4 27718892 136 + 88276631 ----------tttttaaaaatcat-acaaaa-------aattaatt-aaa-----------aaCCAC---------------ATACAGA-----TATCTTCTTTTTAAAACTGGTATAAATAgggacgcctatggcttagctggttaaacatccgacttttgg---------------tttcagctcaggtcgtgatttca i canFam3.chr4 C 0 I 127 e mm10.chr14 24163604 200 + 124902244 I a score=564273.000000 s hg38.chr10_KI270825v1_alt 66976 194 + 188315 agaccagcctggccaacatggtgaaaccccatctctactaaaagtacaaaaattagccaggcatggtggtgcacaccctgtaatcccaactactcaggaggctgaggcagcagaatcacttgaacacgaaagtcagaggttgcagtgagccgggattgcgccactgcgttctaacctgggtgacagagcaagac s panTro4.chr10 76437971 194 + 133524379 agaccagcctggccaacatggtgaaaccccatctctactaaaagtacaaaaattagccaggcatggtggtgcacaccctgtaatcccaactactcaggagactgaggcagcagaatcacttgaacacgaaagtcagaggttgcagtgagccgggattgcgccactgcattctaacctgggtgacagagcaagac i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76107474 194 - 133410057 agaccagcctggccaacatggtgaaaccccatctctactaaaagtacaaaaattagccaggcatggtggtgcacaccctgtaatcccagctactcaggaggctgaggcagcagaatcacttgaacacgagagtcagaggttgcagtgagccgggattgcgccactgcattctaacctgggtgacagagcaagac i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35049135 194 + 104879549 agaccagcctggccaacatggtgaaaccccatctctactaaaagtacaaaagttagccaggcatggtggcgcacgccctgtaatcccagctactcaggaggctgaggcagcagaatcacttgaacacgagagtcagaggttgcaatgagccgggattgcgccactgcattctaacctgggtgacagagcaagac i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73842167 192 - 130959383 agaccagcctggccatcatggtgaaaccccatctcta-taaaagtacaaaaattagccaggcgtggtggctcacg-cctgtaatcccagctactcagggggctgaggcagaagaatcacctgaacacaagagtcggaggttgcagtgagccaggattgcgccactgcactccaacctgggcgacatagcaaaac i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75403264 192 - 133195287 agaccagcctggccatcatggtgaaaccccatctcta-taaaagtacaaaaattagccaggcgtggtggcacacg-cctgtaatcccagctactcaggaggctgaggcagaagaatcacctgaacacaagagtcggaggttgcagtgagccaggattgcgccactgcactccaacctgggcgacagagcaaaac i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73268042 192 - 125196307 agaccagcctggccatcatggtgaaaccccatctcta-taaaagtacaaaaattagccaggcatggtggcacacg-cctgtaatcccagctactcaggaggctgaggcagaagaatcacctgaacacaagagtcggaggttgcagtgagccaggattgtgccactgcactccaacctgggcgacagagcaagac i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72100324 192 - 125710982 agaccagcctggccatcatggtgaaaccccgtctcta-taaaagtacaaaaattagccaggcatggtggcacacg-cctgtaatcccagctactcaggaggctgaggcaggagaatcacctgaacacaagagtcggaggttgcagtgagccaggattgcgccactgcactccaacctgggcgacagagcaagac i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75558313 193 - 121768101 agaccagcctggccaacaaggtgaaaccctgtctctaccaaaagtacaaaa-ttagccaggtgttatggtgcactgcctgtaattccaggtactcaggagactgaggctagagaagcacttgaacacagaaggaagaggttgcagtgagccaggattgcatcactgcactctaacctgggtgacagagcgagac i calJac3.chr12 C 0 C 0 e canFam3.chr4 27719028 127 + 88276631 I e mm10.chr14 24163604 200 + 124902244 I a score=26073.000000 s hg38.chr10_KI270825v1_alt 67170 27 + 188315 tccatatcaaaaaaaaa----------aaaaaaaaaa s panTro4.chr10 76438165 21 + 133524379 tccatatc------aaa----------aaaaaaaaaa i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76107668 17 - 133410057 tccatatc--------------------aaaaaaaaa i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35049329 13 + 104879549 tccatatc------------------------aaaaa i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73842359 36 - 130959383 tccatatcaaaaaaaaa-caaaaagaaaagaaaagaa i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75403456 35 - 133195287 tccatatcaaaaaaaaa--gaaaagaaaagaaaagaa i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73268234 37 - 125196307 tccatatcaaaaaaaaaaaaaaaaaagaaagaaaaga i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72100516 36 - 125710982 tccatatcaaaaaaaaa-aaaaaaagaaagaaaagaa i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75558506 15 - 121768101 tccatttc----------------------aaaaaaa i calJac3.chr12 C 0 C 0 s canFam3.chr4 27719155 27 + 88276631 taaatcttaaaaaaaaa----------ATAAAGAAAA i canFam3.chr4 I 127 I 235 e mm10.chr14 24163604 200 + 124902244 I a score=356587.000000 s hg38.chr10_KI270825v1_alt 67197 119 + 188315 aaaaaGTTAATAGAGGTTATCTACAGGTGGTACCAAA-----GCAAGTGGTTCTTATTTCCCGCTTAGGCCTTTggaggttgcagtgagctgggattgcgtcactgcactccagcctgagggac s panTro4.chr10 76438186 119 + 133524379 aaaaaGTTAATAAAGGTTATCTACAGGTGGTACCAAA-----GCAAGTGGTTCTTATTTCCCGCTTAGGCCTTTggaggttgcagtgagctgggattgcgtcactgcactccagcctgagggac i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76107685 119 - 133410057 aaaaaGTTAATAAAGGTTATCTACAGGTGGTACCAAA-----GCAAGTGGTTCTTATTTCCCTCTTAGGCCTTTggaggttgcagtgagcttggattgcatcactgtactccagcctgagcgac i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35049342 119 + 104879549 aaaaaGTTAATAAAGGTTATCTACAGGTGGTACCAAA-----GCAAGTGGTTCTTATTTCCCTCTTAGGCCTTTggaggttgcagtgagctgggattgtatcactgcactccagcctgagtgac i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73842395 119 - 130959383 aaAAAGTTAATAAAGGTTATCTACAGGTGGTACGAAA-----GCAAGTGGTTCTTATTTCCCTCTTAGGCCTTTggaggttgcagtgagctgggattgcatcactgtactccagcctgagtgac i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75403491 119 - 133195287 aaaAAGTTAATAAAGGTTATCTACAGGTGGTACGAAA-----GCAAGTGGTTCTTATTTCCCTCTTAGGCCTTTGgaggctgcagtgagctgggattgcatcactgtactccagcctgagcgac i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73268271 119 - 125196307 aaaaagttaataaaggTTATCTACAGGTGGTACGAAA-----GCAAGTGGTTCTTATTTCCCTCTTAGGCctttggaggttgcagtgagctgggattgcatcactgtactccagcctgagcgac i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72100552 119 - 125710982 aaAAAGTTAATAAAGGTTATCTACAGGTGGTACGAAA-----GCAAGTGGTTCTTATTTCCCTCTTAGGCCTTTggaggttgcagtgagctgggattgcatcactgtactccagcctgagcgac i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75558521 120 - 121768101 aaaaaGTTAATAAAGGTTATCTACAACTGGTAGATAACCTTTGCAAGTGATTCTTATTTCCCTCCTAAA----Tggaagttgcaataagccgggattgcttcactgcactccaacctgggcgac i calJac3.chr12 C 0 C 0 e canFam3.chr4 27719182 235 + 88276631 I e mm10.chr14 24163604 200 + 124902244 I a score=36985.000000 s hg38.chr10_KI270825v1_alt 67316 12 + 188315 agagagagaTAG s panTro4.chr10 76438305 12 + 133524379 agagagagaTAG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76107804 12 - 133410057 agagagagaTGG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35049461 12 + 104879549 agagagagaTGA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73842514 12 - 130959383 agagagagaTGG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75403610 12 - 133195287 agagagagaTGG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73268390 12 - 125196307 agagagagatgg i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72100671 12 - 125710982 agagagagaTGG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75558641 12 - 121768101 agagtaagacAG i calJac3.chr12 C 0 C 0 s canFam3.chr4 27719417 12 + 88276631 aaaaaaagaaaa i canFam3.chr4 I 235 C 0 e mm10.chr14 24163604 200 + 124902244 I a score=555121.000000 s hg38.chr10_KI270825v1_alt 67328 173 + 188315 AGAAAGG--------------------------TTATCTACAGGTGGTAGCAATGCAATTGATTCTTATTTCCCTCCCAGA---CCT----TTTATTTCCTAATTTTCTACAGTAA--------A-TAGAAACATACCA-----TCAAGAAA----CCTATTTTTAAATGTTCACATAGTACAATGCCCACAACAAGGAAAATATAAAAACTTTGCTCATTACT s panTro4.chr10 76438317 170 + 133524379 AGAAAGG--------------------------TTATCTACAGGTGGTAGCAATGCAATTGATTCTTATTTCCCTCCCAGA---CCT----TTTATTTCCTAATTTTCTACAGTAA--------A-TAGAAACATACCA-----TCAAGAAT----CCTATTTTTAAATGTTCACATAGTAC-ATGCCCAGAACAAGG-AAATAT-AAAACTTTGCTCATTACT i panTro4.chr10 C 0 I 6350 s ponAbe2.chr10 76107816 173 - 133410057 AGAAAGG--------------------------TTATCTACAGGTGGTAGCAATGCAATTGATTCTTATTTCCCTCCTAGA---CCT----TTTATTTCCTAATTTTCTACAGTAA--------A-TAGAAACATACCA-----TCAAGAAA----CCTATTTTTAAATGTTCACATAGTACAATGCCCAGAACAAAGAAAATATAAAAACTTTGCTCATTACT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35049473 173 + 104879549 AGAAAGG--------------------------TTATCTACAGGTGGTAGCAATGCAATTGATTCTTACTTCCCTCCTAGA---CCT----TTTATTTCCTAATTTTCTACAGTAA--------A-TAGAAACATACCA-----TCAAGAAA----CCTATTTTTAAATGTTCACATAGTACAATGCCCAGAACAAGGAAAATATAAAAACTCTGCTCATTACT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73842526 173 - 130959383 AGAAAGG--------------------------TCATCTACACATGGTAGCAACGCAATTGATTCTTATTTCCCTCCTAGA---CCT----TTTATTTCCTAATTTTCTACAGTAA--------A-TAGAAATATACCA-----TCAAGAAA----CCTATGTTTAAATGTTCACATAGTACAATGCCCAGAACAAGGAAAATATAAAATCTTTGCTCATTACT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75403622 173 - 133195287 AGAAAGG--------------------------TCATCTACACATGGTAGCAACGCAATTGATTCCTATTTCCCTCCTAGA---CCT----TTTATTTCCTAATTTTCTACAGTAA--------A-TAGAAATATACCA-----TCAAGAAA----CCTATGTTTAAATGTTCACATAGTACAATGCCCAGAACAAGGAAAATATAAAATCTTTGCTCATTACT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73268402 173 - 125196307 agaaagg--------------------------tTATCTACACATGGTAGCAACGCAATTGATTCTTATTTCCCTCCTAGA---cct----tttatttcctaattttctaCAGTAA--------A-TAGAAATATACCA-----TCAGGAAA----CCTATGTTTAAATGTTCACATAGTACAATGCCCAgaacaaggaaaatataaaatctttGCTCATTACT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72100683 173 - 125710982 AGAAAGG--------------------------TTATCTACACATTGTAGCAACGCAATTGATTCTTATTTCCCTCCTAGA---CCT----TTTATTTCCTAATTTTCTACAGTAA--------A-TAGAAACATACCA-----TCAAGAAA----CCTATGTTTAAATGTTCACATAGTACAATCCCCAGAACAAGGAAAATATAAAATCTTTGCTCATTACT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75558653 177 - 121768101 AGAAAGG--------------------------TTATTTACAAGTGGTAGCAACGCAAGTGATTCTTACTTCCCTCCTAGA---CCTTTTCTTTATTTACTAACTTTCTACAGTAA--------A-TAGAAACATACCG-----TCATGAAA----CCTATTTTTAAATGTTCACATGGTACAATGCCCAGAACAAGGAGAATATAAAAACTTTGCTCATTACT i calJac3.chr12 C 0 C 0 s mm10.chr14 24163804 168 + 124902244 AGAAAGG--------------CATGA-------CTGCCTTCAGGATGCAGCAGCAAAAGAAATGCTTCTCTTCTTCCTAGACTGCTC----TGTTCTTCCTAATGTTCTCCAACAGTCACTGCCA-CAGTGACTCAGCACTTCCTTAGGGAAAGGGCTTATTTTT-AATGTTCATACAGCGCACTACCCATGACC----------------------------- i mm10.chr14 I 200 C 0 s canFam3.chr4 27719429 178 + 88276631 aGAAATACATTTCAAATTGCTCATGATAACCTTTTATCTGTAGGTGGTCGCAATAAGAGGGATTCTTATTTC------------CTT----CATATTTCCT-ATTTTCTACTATAA--------ATTAGAAATACACTG-----TCAGAAAA----AAAAATGTT---TGTTCACATTAG---------AGAACGAGGCAAACATAGAAACTCCAATCACTACT i canFam3.chr4 C 0 C 0 a score=1640357.000000 s hg38.chr10_KI270825v1_alt 67501 468 + 188315 TCTTGCTCAAACCTCCCAAATGTAATCTGCCTATGCACGGCAGATGACCCTGGCTCCAGCCTTGAGACTTACCGCAACGATCCTGTCTCCCACAGCAAGGGACCCTTCTTTAGCGGCAGGGCTTCCAGGCAGCACAGCGGCAGCATACACTCCATTCTCCAGACTGATGCCACTGTCTGCA---------------AGCCACAGGAGGTCACTGGGTAGCCCCTGGCCTCGCTGCCCAGCCCT-GGGTCACCCTACCTCATCTTTGT--TACCATCTTCTTACAAAAGAGGATGTCAGCAG-GCTGC--GCCCTGTCTACGCCTGCACCCTGCCCCA-GT---CCCACCAATC-GGGGG---------------------------------------------------------------------------CTCAGTTACATCTACCCT------------GGTGAATCAAACACTCAGAA---AGCAAGACTCAGGGCCCAGA-CCACCTCTTGCCAGAAAAGCACAT-GGGCTACATTTAAATGGCATTGGCCCCT---------CATCCCTGTGAATGAGGTGCTCTAA s panTro4.chr10 76444837 468 + 133524379 TCTTGCTCAAACCTCCCAAATGTAATCTGCCTATGCATGGCAGATGACCCTGGCTCCAGCCTTGAGACTTACCGCAACGATCCTGTCTCCCACAGCAAGGGACCCTTCTTTAGCGGCAGGGCTTCCAGGCAGCACAGCGGCAGCGTACACTCCATTCTCCAGACTGATGCCACTGTCTGCA---------------AGCCACAGGAGGTCACTGGGTAGCCCCTGGCCTCGCTGCCTAGCCCT-GGGTCACCCTACCTCATCTTTGT--TACCATCTTCTTACAAAAGAGGATGTCAGCAG-GCTGC--GCCCTGTCTACGCCTGCACCCTGCCCCA-GT---CCCACCAATC-AGGGG---------------------------------------------------------------------------CTCAGTTACATCTACCCT------------GGTGAATCAAACACTCAGAA---AGCAAGACTCAGGGCCCAGA-CCACCTCTTTCCAGGAAAGCACAT-GGGCTACATTTAAATGGCATTGGCCCCT---------CATCCCTGTGAATGAGGTGCTCTAA i panTro4.chr10 I 6350 T 6243 s ponAbe2.chr10 76107989 471 - 133410057 TCTTGCTCAAACCTCCCAAATGTAATCTGCCTATGCACGGCAGATGACCCTGGCTCCAGCCTTGAGACTTACCGCAACGATCCTGTCTCCCACAGCAAGGGACCCTTCTTTAGCGGCAGGGCTTCCAGGCAGCACAGCGGCAGCGTACACTCCATTCTCCAGACTGATGCCACTATCTGCA---------------AGCCACAGGAGGTCACTGGGTAGCCCCTGGCCTCGCTGCCCAGCCCT-GGGTCACCCTACCTCATCTTTGT--TACCATCTTCTTACAAAACAGGATGTCAGCAG-GCTGC--GCCCTGTCTACCCCTGCACCCTGCCCCA-GT---CCCACCAATCGGGGGG---------------------------------------------------------------------------CTCAGTTACATCTACCCT------------GGTGAATCAAACACTCAGAA---AGCAAGACTCAGGGCCCAGACCCACCTCCTGCCAGGAAAGCACATGGGGCTACATTTAAATGGCATTGGCCCCT---------CATCCCTGTGAATGAGGTGCTCTAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35049646 465 + 104879549 TCTTGCTCAAACCTCCCAAACGTAATCTGTCTATGCACGGCAGATGACCCTGGCTCCAGCCTTGAGACTTACTGCAACGATCCTGTCTCCCACAGCAAGGGACCCTTCTTTAGCGGCAGGGCTTCCGGGCAGCACGGCAGCAGCATACACTCCATTCTCCAGACTGATGCCACTGTCTGAA---------------AGCCACAGGAGGTCACTGGGTAGTCCCTGGCCTCGCTGCCCAGCCCT-GGGTAACCCTACCTCATCTTTGT--TACCATCTTCTTACAAAA---GATGTCAGCAG-GCTGT--GCCCTGTCTACCCCTGCACCCTGCCCCA-GT---CCCACCAATC-GGGGG---------------------------------------------------------------------------CTCAGTTACATCTACCCT------------GGTGAATCAAACACTCAGAA---AGCAAGACTCAGGGCCCAGA-CCACCTCCTGCCAGGAAAGCACAT-GGGCTACATTTAAATGGCACTGGCCCCT---------CATCCTTGTGAATGAGGTGCTCTAA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73842699 479 - 130959383 TCTTGCTCAAACCTCCCAAATGTAATCTGTCTATGCACAGCAGATGACCCTGGCTCCAGCCTTGAGACTTACCGCAACAATCCTGTCTCCCACAGCAAGGGACCCTTCTTTGGCGGCAGGGCTTCCGGGCAGCACGGCGGCAGCATACACTCCATTCTCCAGACTGATGCCGCTGTCTGCA---------------AGCCACAGGAGGTCACTGGGTAGCCCCTGGCCTCGCTGCCCAGCCCC--GGTCACCCTACCTCATCTTTGT--TACCATCTTCCCACAAAAGAGGATGTCAGCAG-GCTGC--ACCCTCTCTACCCCTGCACCCTGCCCCA-GT---CCCACCAATT-GGGGG---------------------------------------------------------------------------CTCAGTTACATCTGCCCTTACATCTGCCCAGGTAAATCAAACACTCAGAA---AGCAAGACTCAGGGCCCAGA-CGACCTCCGGCCAGGAAAGCACAT-GGGCTACATTTAAATGGCATCGGCCCCT---------CATCCCTGTGAATGAGGTACTCTAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75403795 479 - 133195287 TCTTGCTCAAACCTCCCAAATGTAATCTGTCTATGCACAGCAGATGACCCTGGCTCCAGCCTTGAGACTTACCGCAACAATCCTGTCTCCCACAGCAAGGGACCCTTCTTTGGCGGCAGGGCTTCCGGGCAGCACGGCGGCAGCATACACTCCATTCTCCAGACTGATGCCGCTGTCTGCA---------------AGCCACAGGAGGTCACTGGGTAGCCCCTGGCCTCACTGCCCAGCCCC--GGTCACCCTACCTCATCTTTGT--TACCATCTTCCCACAAAAGAGGATGTCAGCAG-GCTGC--ACCCTCTCTACCCCTGCACCCTGCCCCA-GT---CCCACCAATT-GGGGG---------------------------------------------------------------------------CTCAGTTACATCTGCCCTTACATCTGCCCAGGTAAATCAAACACTCAGAA---AGCAAGACTCAGGGCCCAGA-CGACCTCCTGCCAGGAAAGCACAT-GGGCTACATTTAAATGGCATCGGCCCCT---------CATCCCTGTGAATGAGGTACTCTAA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73268575 479 - 125196307 TCTTGCTCAAACCTCCCAAATGTAATCTGTCTATGCACAGCAGATTACCCTGGCTCCAGCCTTGAGACTTACCGCAACAATCCTGTCTCCCACAGCAAGGGACCCTTCTTTGGCGGCAGGGCTTCCGGGCAGCACGGCGGCAGCATACACTCCATTCTCCAGACTGATGCCGCTGTCTGCA---------------AGCCACAGGAGGTCACTGGGTAGCCCCTGGCCTCGCTGCCCAGCCCC--GGTCACCCTACCTCATCTTTGT--TACCATCTTCCCACAAAAGAGGATGTCAGCAG-GCTGC--ACCCTCTCTACCCCTGCACCCTGCCCCA-GT---CCCACCAATT-GGGGG---------------------------------------------------------------------------CTCAGTTACATCTGCCCTTACATCTGCCCGGGTAAATCAAACACTCAGAA---AGCAAGACTCAGGGCCCAGA-CAACCTCCTGCCAGGAAAGCACAT-GGGCTACATTTAAATGGCATCGGCCCCT---------CATCCCTGTGAATGAGGTACTCTAA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72100856 480 - 125710982 TCTTGCTCAAACCTCCCCAATGTAATCTGTCTATGCACGGCAGATGACCCTGGCTCCGGTCTTGAGACTTACCGCAACAATCCTGTCTCCCACAGCAAGGGACCCTTCTTTGGCGGCAGGGCTTCCGGGCAGCACGGCGGCAGCATACACTCCATTCTCCAGACTGATGCCACTGTCTGCA---------------AGCCACAGGAGGTCACTGGGTGGCCCCCGGCCTCGCTGCCCAGCCCC--GGTCACCCCACCTCATCTTTGT--TACCATCTTCCTACAAAAGAGGATGTCAGCAG-GCTGC--ACCCTCTCTACCCCTGCACCCTGCCCCAGGT---CCCACCAATT-GGGGG---------------------------------------------------------------------------CTCAGTTACATCTGCCCTTACATCTGCCCGGGTAAATCAAACACTCAGAA---AGCAAGACTCAGGGCCCAGA-CAACCTCCTGCCAGGAAAGCACAT-GGGCTACATTTAAATGGCATCGGCCCCT---------CATCCCTGTGAACGAGGTACTCTAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75558830 548 - 121768101 TCTTGCTCAAACCTCACAAATGTAAACTGTCTATGCACAGCAGATGACCCTGGCTCCCACCTTGAGACTTACCGCGACAATTCTGTCTCCCACAGCAAGTGACCCTTCTTTTGCGGCAGGGCTTCCGGGCAGCACGGCAGCAGCGTACACTCCATTCTCCAGACTGATGCCACTGTCTGCA---------------AGCCACAGGAGGTCACTGGGTAGCCCCTGTCCTTGCTGCCCAGCCCC--GGTTGCCCTACCTTATATTTGT--TACCATCTTCTTATAAAAGAGGACATCAGTCGCGCTGAAGGGCCTGTCTACCCCCACACCCTGCCCTG-GT---CCCATCAATC-AGGGGTCANNNNNNNNNNAGAGACATCATTGGGTGGGTCTGTTTCATACCCACCACCCTGGCTTGTTCCATCATCAGGGTTTCAGTCACATCTGGCCC--------CCTTAATGAATCAAACACTCAGAA---AGCAAGACTCAGGGCCCAGA-CAACCTCCTGCCAGGAAAGCACAT-GGGCTACATTT-AATGGCAGTGGCCCCT---------CATCCCTATGAATGAGATGCTTTAA i calJac3.chr12 C 0 C 0 s mm10.chr14 24163972 369 + 124902244 TCTTACTCAAGGCTCCCG----------GCCTATGCA--GCAGACGA--CTTGCTCTGTTCTGGAGACTTACCGCAACAATCCTGTCTCCCACGGCGAGGGACCCCTCTTTGGCAGCCGGGCTTCCAGGCACCACTGCGGCAGCATACACTCCATTCTCCAAACTGATGCCACTGTCTACA---------------AGTCACAGGAGGGCACTGGATGA--CCTGGCCT----------------GGTTGCCCCAACCCGATTCTGC--TGACTACATTTATCAAAGG------------G-ACTGA--ATTC------------CATTCTATGCCA--T---CCCACA-----GGGAG---------------------------------------------------------------------------C---ATCACACC---CCT--------CTCTGGTGAGTCAGGCACT----------GGAGACTCAGG--------CGACCTCCCAGCAGGACAGCAC---------CATCAACATG---------------------CACCCCTGGGAACAAGGTGATC--- i mm10.chr14 C 0 C 0 s canFam3.chr4 27719607 477 + 88276631 TTGTGTTCCA-CCGCCCCGACGTCCTCTAACCGTCCACATGGGGCA--CACAGCCCCAGGCCTGAGGCTTACCGCCACAATCCTGTCTCCCACGGCGAGGGACCCCTCTTTGGCAGCCGGGCTTCCAGGCACCACAGCGGCAGCATACACTCCATTCTCCAGACTGATGCCGCTGTCTGTGAAAACCACAGAGGGCAGACACAGGCAGTGTCCAGTTAATACCTGCCCCGGTCGCATGGCCCTCTGGTTGTCCCACCTCATCTCTGTAAGACGAACTCAT----GAGGGGCACGTTAGCCA-ACTGC--AACCTGTCAGTCCCAGCATCCAGGCCAG-GTTGGTGGACCACCC-CGGGG---------------------------------------------------------------------------CTCAGTCATGTCTGCTCC------------AGGGAATCAAACACTTGGAGACCAGCAAGACCCAGGCCCCAGG-GGGCCCCCTGCCAGGGAGGCACCC-ATGCTACATTTAAGCAGCATCGATGCCTCTGAAGCAACACACCTG----------------- i canFam3.chr4 C 0 C 0 a score=3081562.000000 s hg38.chr10_KI270825v1_alt 67969 842 + 188315 GGGGCACCCCCGGCCCCTGTCCAC-AAAAAAGGG--CCCCAGCCACCTGAGGCA--CTCTG-CCATGTTCACAGGCCCGCTACCTTTCTGTCCACTGAGGTTGATGTGCAGCGGCGTGACCACCTTCCCACCCAGGGACTTCCTCCGCCGCACGACCATGTTGATGGCCCCCTCCCCATTGAGGAGCGCCTTGATGGCCTGCTTCTTGTCCTTGTTGATGAGGTCCACATCGTTGATTCTCAGCAGCCAGTCATTGACCCTGAGAAAGGGCACAGCCAGTTCAGCACCCACACAGGCTGTGGGACCAGCGGCTA-CCGCCCACAACT---CTCACTCAGGGGGC-TGACTGCCAAGGAGTGGGTGCCTCACATACACGCTCAGA-AAATCTCCTCTTGCAGGAGTgcacagtggtgaaatttgcaaatgctgaggttagacag------------------cctgggttcaaatcctggccctaccacttactagttgtatgacctagcccctccaggcctcagcgtcttcatatgtaaaatgggggcaataatcacgcc--taccttgtaggattgtaaagattaatcaattaatttctataaagtgcttaaaccagtactcagcaaat----agcactgtaatagtgttagctat---tTTATCATCATGACTATTTCCCTGAATGAGCATGCCATGT----ACATCCTGGGCTCTCACGCATACCCCTTGAGCACTTTCCCACCCAAAGGAGCAAAAG-ACAGTACCTGGTAACTAAAGAATAATCAGATTCA-GAGGCAACTGAGAAGCACTGTTTC-TTTCGGAGCATTATTAGCTGCTGAGACTGCAGGCCTTGGACAGA-CTGTGTGTGAGTCTAAGGCTGG-- s panTro4.chr10 76439062 842 + 133524379 GGGGGACCCCCGGCCCCTGTCCAC-AAAAAAGGG--CCCCAGCCACCTGAGGCA--CTCTG-CCATGTCCACAGGCCCGCTACCTTTCTGTCCACTGAGGTTGATGTGCAGCGGCGTGACCACCTTCCCACCCAGGGACTTCCTCCGCCGCACGACCATGTTGATGGCCCCCTCCCCATTGAGGAGCGCCTTGATGGCCTGCTTCTTGTCCTTGTTGATGAGGTCCACATCGTTGATTCTCAGCAGCCAGTCATTGACCCTGAGAAAGGGCACAGCCAGTTCAGCACCCACACAGGCTGTGAGACCAGCGGCTA-CCGCCCACAACT---CTCACTCAGGGGGC-TGACTGCCAAGGAGTGGGTGCCTCACATACACGCTCAGA-AAATCTCCTCTTGCAGGAGTgcacagtggtgaaatttgcagatgctgaggttagacag------------------cctgggttcaaatcctggccctaccacttactagttgtatgacctagcccctccaggcctcagcgtcttcatatgtaaaatgggggcaataatcacgcc--taccttgtaggattgtaaagattaatcaattaatttctataaagtgcttaaaccagtactcagcaaat----agcactgtaatagtgttagctat---tTTATCATCATGACTATTTCCCTGAATGAGCATGCCATGT----ACATCCTGGGCTCTCACGCATACCCCTTGAGCACTTTCCCACCCAAAGGAGCAAAAG-ACAGTACCTGGTAACTAAAGAATAATCAAATTCA-GAGGGAACTGAGAAGCACTGTTTC-TTTCGGAGCATTATTAGCTGCTGAGACTGCAGGCCTTGGACAGA-CTGTGTGTGAGTCTAAGGCTGG-- i panTro4.chr10 T 6243 C 0 s ponAbe2.chr10 76108460 847 - 133410057 GGGGCA-CCCCGGCCCCTGTCCAC-AAAAAAGGG--CCCCAGCCACCTGAGGCA--CTCTG-CCATGTCCACAGGCCCACTACCTTTCTGTCCACTGAGGTTGATGTGCAGCGGCGTGACCACCTTCCCACCCAGTGACTTCCTCCGCCGCACGACCATGTTGATGGCCCCCTCCCCATTGAGGAGCGCCTTGATGGCCTGCTTCTTGTCCTTGTTGATGAGGTCCACATCGTTGATTCTCAGCAGCCAGTCGTTGACCCTGAGAAGGGACACAGCCAGTTCAGCACCCACACAGGCTGTGGGACCAGCGGCTAGCTGCCCACCACT---CTCACTCAGGGAGC-TGACTGCCAAGGAGTGGGTGCCTCACATACACGCTCAGA-AAATCTCCTCTTGCAGGAGTgcacagtggtgaaatttgcagatgctgaggttagacag------------------cctgggttcaaatcctggccctaccacttactagttgtatgacctagcccctccaggcctcagtgtcctcatatgtaaaatgggggcaataatcacgcc--taccttgtagggttgtgaagattaatcaattaatttctataaagtgcttaaaccagtactcagcaaatagtcagcaccataatagtgttagctat---tTTATCATCATGACTATTTCCCTGAATGAGCATGCCATGT----ACATCCTGGGCTCTCACACATACCCCCTGAGCACTTTCCCACCCAAAGGAGCAAAAG-ACAGTACCTGGTAACTAAAGAATAATCAGATTCA-GAGGCAACTGAGAAGCACTGTTTCTTTTTGAAGCATTATTAGCTGCTGAGACTGCAGGCCTTGGACAGA-CTGTGTGTGAGTCTAAGGCTGG-- i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35050111 847 + 104879549 AGGGCACCCCCGGCCTCTGTCCAC-AAAAAAGGG--GCCCAGCCACCTGAGGCA--CTCTG-CCATGTCCACAGGCCCGCTACCTTTCTGTCCACTGAGGTTGATGTGCAGCGGCGTGACCACCTTCCCACCCAGAGACTTCCTCCGCCGCACGACCATGTTGATGGCCCCCTCCCCATTGAGGAGCGCCTTGATGGCCTGCTTCTTGTCCTTGTTGATGAGGTCCACATCATTGATTCTCAGCAGCCAGTCGTTGACCCTGAGAAGGGGCACAGCCAGTTCAGCACCCACATAGGCTGTGGGACCAGCGGCTAGCCGCCCACCACT---CTCACTCAGGGGGC-TGACTGCCAAGGAGTGGGTGCCTCACATACACGCTCAGA-AAATCTCCTCTTGCAGGAGCAcacagtggtgaaatttgcagatgctgaggttagacag------------------cctgggttcaaatcctggccctaccacttactagttgtataacctagcccctccaggcctcagtgccctcatatgtaaaatgggggtgataatcacacc--taccttgtagggttgtaaagattaatcaattaatttctataaagtgcttaaaccagtactcagcaaattgtcagcactgtaatagtgttagctat---tTTATCATCATGACTATTTCCCTGAATGAGCATGCCATGT----ACATCCTGGGCTCTCACGCATACCCCCTGAGCACCTTCCCACCCAAAGGAGCAAAAG-ACAGTACCTGG-AACTAAAGAATAATCAGATTCA-GAGGCAACTGAGAAGCACTGTTTCTTTTTGGAGCATTATTATCTGCTGAGACTGCAGGCCTTGGATAGA-CTGTGTGTGAGTCTAAGGCTAG-- i nomLeu3.chr18 C 0 M 100 s rheMac3.chr9 73843178 837 - 130959383 GGGGCACCCCTGGCACCTGTCCAC-AAAAAAGGG--CCCCAGCCACCTGAGGCA--CTCTG-CCATGTCCACAGGCCCACTACCTTTCTGTCCACTGAGGTTAATGTGCAGCGGCGTAACCACCTTCCCACCCAGGGACTTCCTCCGCCGCACGACCATGTTGATGGCCCCCTCCCCGTTGAGGAGCGCCTTGATGGCCTGCTTCTTGTCCTTGTTGATGAGGTCCACATCGTTGATTCTCAGCAGCCAGTCATTGACCCTGAGAAGGGGCACAGCCAGTTCAGCACCCACACAGGCTGTGGGACCAGCGGTTAGCCGCCCACCACT---ACCATTCAGGGGGC-TGACTGCCAAGGAGTGGGTGCCTCACATACACGTTCAGA-AAATTTCCTCTTGCAGGAGTgcacattggtaaaatttgcagatgctgaggttagacag------------------cctgggtttaaatcctggccctaccacttactagttgtatgatccagcccctccaggcctcaatgtcctcatatgtaaaatgggggcaataatcacgcc--taccttgtagggttgtaaagactaatcaattaatttctataaagtatttaaaacagtactcagcagtcagccagcactgtaatagtgttagctat---tTTATCATCATGACTATTTCCCTGAATGAGCATGCCATGT----ACGTCCTGGGCTCTCACACATACCCCCTGAGCACTTTCCCACCCAAAGGAGCAAAAG-ACAGCACTTGGTAACTAAAGAATAATCAGATTCA-GAGGCAACTGAGAAGCACTGTTTCTTTTTGGAGCAGTATTAGCTGCTGAGACTGCAGGCCTTGGACAGA------------TCTCAGGCTGG-- i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75404274 837 - 133195287 GGGGCACCCCTGGCACCTGTCCAC-AAAAAAGGG--CCCCAGCCACCTGAGGCA--CTCTG-CCATGTCCACAGGCCCACTACCTTTCTGTCCACTGAGGTTGATGTGCAGCGGCGTAACCACCTTCCCACCCAGGGACTTCCTCCGCCGCACGACCATGTTGATGGCCCCCTCCCCGTTGAGGAGCGCCTTGATGGCCTGCTTCTTGTCCTTGTTGATGAGGTCCACATCGTTGATTCTCAGCAGCCAGTCATTGACCCTGAGAAGGGGCACAGCCAGTTCAGCACCCACACAGGCTGTGGGACCAGCGGTTAGCCGCCCACCACT---ACCATTCAGGGGGC-TGACTGCCAAGGAGTGGGTGCCTCACATACACGTTCAGA-AAATTTCCTCTTGCAGGAGTgcacattggtaaaatttgcagatgctgaggttagacag------------------cctgggtttaaatcctggccctaccacttactagttgtatgatccagcccctccaggcctcaatgtcctcatatgtaaaatggggacaataatcacgcc--taccttgtagggttgtaaagactaatcaattaatttctataaagtatttaaaccagtactcagcagtcagccagcactgtaatagtgttagctat---tTTATCATCATGACTATTTCCCTGAATGAGCATGCCATGT----ACGTCCTGGGCTCTCACACATACCCCCTGAGCACTTTCCCACCCAAAGGAGCAAAAG-ACAGAACTTGGTAACTAAAGAATAATCAGATTCA-GAGGCAACTGAGAAGCACTGTTTCTTTTTGGAGCAGTATTAGCTGCTGAGACTGCAGGCCTTGGACAGA------------TCTCAGGCTGG-- i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73269054 834 - 125196307 GGGGCACCCCTGGCACCTGTCCAC-AAAAAAGGG--CCCCAGCCACCTGAGGCA--CTCTG-CCATGTCCACAGGCCCACTACCTTTCTGTCCACTGAGGTTGATGTGCAGCGGCGTAACCACCTTCCCACCCAGGGACTTCCTCCGCCGCACGACCATGTTGATGGCCCCCTCCCCGTTGAGGAGCGCCTTGATGGCCTGCTTCTTGTCCTTGTTGATGAGGTCCACATCGTTGATTCTCAGCAGCCAGTCATTGACCCTGAGAAGGGGCACAGCCAGTTCAGCACCCACAGAGGCTGTGGGACCAGCGGTTAGCCGCCCACCACT---ACCATTCAGGGGGC-TGACTGCCAAGGAGTGGGTGCCTCACATACACGTTCAGA-AAATT---TCTTGCAGGAGTGCACACTGGTAAAATTTGCAGATGCTGAGGTTAGAcag------------------cctgggtttaaatcctggcccTACCACTTACTAGTTGTATGATCCAGCCCCTCCAGGCCTCAAtgtcctcatatgtaaaatgggggcAATAATCACGCC--TACCTTGTAGGGTTGTAAAGACTAATCAATTAATTTCCATAAAGTATTTAAACCAGTACTCAGCAGTCAGCCAGCACTGTAATAGTGTTAGCTAT---TTTATCATCATGACTATTTCCCTGAATGAGCATGCCATGT----ACGTCCTGGGctctcacacacaccccctgAGCACTTTCCCACCCAAAGGAGCAAAAG-ACAGCACCTGGTAACTAAAGAATAATCAGATTCG-GAGGCAACTGAGAAGCACTGTTTCTTTTTGGAGCAGTATTAGCTGCTGAGACTGCAGGCCTTGGACAGA------------TCTCAGGCTGG-- i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72101336 837 - 125710982 GGGGCACCCCTGGCACCTGTCCAC-AAAAAAGGG--CCCCAGCCACCTGAGGCA--CTCTG-CCATGTCCATAGGCCTGCTACCTTTCTGTCCACTGAGGTTGATGTGCAGCGGCGTAACCACCTTCCCACCCAGGGACTTCCTCCGCCGCACGACCATGTTGATGGCCCCCTCCCCATTAAGGAGCGCCTTGATGGCCTGCTTCTTGTCCTTGTTGATGAGGTCCACATCGTTGATTCTCAGCAGCCAGTCGTTGACCCTGAGAAGGGGCACAGCCAGTTCAGCACTCACACAGGCTGTGGGACCAGCGGTTAGCCGCCCACCACT---ACCATTCAGGGGGC-TGACTGCCAAGGTGTGGGTGCCTCACATACACGTTCAGA-AAATCTCCTCTTGCAGGAGTgcacattggtaaaatttgcagatgctgaggttagacag------------------cctgggtttaaatcctggccctaccacttactagttgtatgatccagcccctccaggcctcaatgtcctcatatgtaaaatgggggcaacaatcatgcc--taccttgtagggttgtaaagactaatcaattaatttctataaagtatttaaaccagtactcagcaaacagtcagcactgtgatagtgttagctat---tTTATCATCATGACTATTTCCCTGAATGAGCATGCCATGT----ACGTCCTGGGCTCTCACACATACCCCCTGAGCACTTTCCCACCCAAAGGAGCAAAAG-ACAGCACCTGGTAACTAAAGAATAATCAGATTCA-GAGGCAACTGAGAAGCACTGTTTCTTTTCGGAGCAGTATTAAATGCTGAGACTGCAGGCCTTGGACAGA------------TCTCAGGCTGG-- i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75559378 812 - 121768101 AGGACAACTCCGGCCCCTGTCCACAAAAAAAGGG--CCCCTGCCTCATGAGGAA--CTCTG-CCATGTCTACAGGCCCGCTACCTTTCTGTCCACTGAGGTTGATGTGCAGTGGCGTCACCACCTTCCCACCCAGGGACTTCCTCCGCCGCACAACCATGTTGATGGCCCCCTCCCCATTGAGGAGCGCCTTGATGGCCTGCTTCTTGTCCTTGTTGATGAGGTCCACATCGTTGATTCGCAGCAGCCAGTCATTGACCCTGAGAAGGGACACAGACAGGTCAGCACCCACACAGGCTG-GGGACTAGCGGTTAGCCGCCCACTGCT---CCCATTCAGGGGGC-TGACTGCCAAAGAGTGAGTGCCCCACATACATGCTCAGA-AAATC---TCTTCCAGGAGTgcagagtggtgaaatctgcagatgctgaggttagacag------------------cctgggttcaaagcctggctctaccacttattagctgtatgaactagcccctccaggtt---gtgtcctc-------aagtgtgggcaataaacacacc--tatcttgtagggttataaagattaatcaatcaattt--ataaagtgcttaaaccagcactcagcaaat----agcactgtataagtgttagctat---tTTATCATCATGACTATTTTACTGAATGAGCATGCCATGC----ACATCCTGGGCTCTCACACATATCCCCTGAGCACTTTCCCATCCAAAGAAGCAAAAG-ACAGCACCTGGTAACTGGAAAAAAATCAAATTCA-GAGGCAACTGAGAAGCA--GTTTCTTTATGGAGCAGTATTAGTTGGTGAGACTGCAGGCCT---------------GTGAGTCTGAGGCTG--- i calJac3.chr12 C 0 C 0 s mm10.chr14 24164341 794 + 124902244 --------------------CCAC----AAACTG--TCCCCTCTAGCAGAGGGGATATCTG-CCTCACCTTGAGGCCTACTACCTTTCTGTCCACTGAGGTTGATGTGCAGAGGTGTGACGACCTTCCCACCCAGGGACTTCCTCCGCCTCACAACCATGTTGATGGCTCCCTCTCCGTTGAGGAGTGCCTTGATGGCCTGTTTCTTGTCCTTGTTGATGAGGTCTACATCGTTGATTCTCAGCAGCCAGTCGTTGACCCTGAGGGGGGACAAGGTCAGGCAGGTACCCACTCAGACCCTGGGACCAGTAGCTG-CCTCTCACTACCATGCCTACTTCCAGGCT-CATGTGTCAACAAGCAGGTTCCCTGCATCCAAACTCAAG-AGGGTTGCAGCCTCCAGAGTGCATGGTTATAAAACTCACGGATGCTGGCGTTAGacagatgctgacgttagacaaccttggcttcaaatcctgactctgccacttactagctgtggaacctggt--------gtttttgtgtcctcatctgtaaggtg-gggcaatatttgcact--tgcctctaa---ttataaagattaatgattaaaag---gtgcagtgtgcacaccaggactcggca-------------gtagttagGACAGCTATCACTCTATCCTCTT-------------------CAGGCAGTGC-----CACTCCCTGCTCTCA-GCACATACCCTGAGC-CCTGATCTCACACAGAAGCAAAAACACAGCTCCTGCTACCTGGAGAAGAGCCAGATTCAGGGGGCACCTGGCAGGTA--GTCTCCTTTAAGACCATC-----CAGCTGAGCTTG-GCTCTTCAGACAGCTCTGTGGGTCC-TCTGATACTAG-- i mm10.chr14 C 0 C 0 s canFam3.chr4 27720084 818 + 88276631 AAAACGCACATATCCCCTCTGCAC-AAGGAAGGGGTGCCCTGCTGTGGGAGGCG--CCCCACCCGCGTCTGCGGGCCCACTACCTTTCTGTCCACTCAGGTTGATGTGCAGTGGTGTGATCACCTTCCCGCCCAGAGACTTCCTCCGCCGCACAACCATGTTGATGGCCCCCTCCCCATTGAGGAGGGCTTTGATGGCCTGCTTCTTGTCCTTGTTGATGAGGTCCACATCGTTGATTCTCAGCAGCCAGTCATTGACCCTGAGGAGCAGCACAGCCAGGTCAGTGCCCACACAGGCCTTGGGGCCAGGGGGGCAGGCCCCATCGCT---ACAGTTTGGGGGAAGCAAGTGCCAGAAAGCGGGTGCCCCACATACAAGGTCAGACAGGTGGCCTCTTTGGGAAG--------GGTCAAAT-------GGctacaaccagactg------------------cctgcgtgcaaattctggctttaccacatactagctgtgtgccctacctcctctggacctcagtgtcctcacctgtaaaatg-aggcaattagcactacagtacctcataggattttaaagattaatgaaatgatt-atacacagtgcttaaaccagtacttagcaaatag----------------------taC---TTTATTATCATTACTCTTTCACGGAACAAACACGCGATGTCACAACACCCCATGCTCGGGCACATACCGCCTGAGCCCTCTCCTACCTAGAGAGGTGAAGC-GTGGTACCGGGGGCCTGTGCAAAGATCAGACTCA-CAGGCTCTCGTGAATCA--GTCTCCTTCCAGAAGGATGTTAGGAGCGGAGCCTGCAGGCCTGAGACTGC-CAGTCCCTC--CCTCAGACCGCAG i canFam3.chr4 C 0 C 0 a score=582046.000000 s hg38.chr10_KI270825v1_alt 68811 170 + 188315 GAAAC----GTTCACCTAAGTGCTACCTGGCTCTCTTCGGGTCCTCTGCACTGGGA-AGAAG-------GGCCCCACCTTG--CCTCCAGAGCCTGGGC---CTCAACTCTTACCTTAAGCGGCCATCAGCAATGCTTCCTTTGTCCACTTTAGTGACAAATATGCCACAGTCCCCCGGGAAACAAG s panTro4.chr10 76439904 174 + 133524379 GTACCCGGGGTTCACCTAAGTGCTACCTGGCTCTCTTCGGGTCCTCTGCACTGGGG-AGAAG-------GGCCCCACCTTG--CCTCCAGAGCCTGGGC---CTCAACTCTTACCTTAAGCGGCCATCAGCAATGCTTCCTTTGTCCACTTTAGTGACAAATATGCCACAGTCCCCCGGGAAACAAG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76109307 170 - 133410057 GAAAC----GTTCACCTAAGTGCTACGTGGCTCTCTTCAGGTCCTCTGCACTGGGG-AGAAG-------GGCCCCACCTTG--CCTCCAGAGCCTGGGC---CTCAACTCTTACCTTAAGCGGCCATCAGCAATGCTTCCTTTGTCCACTTTAGTGACAAATATGCCACAGTCCCCCGGGAAACAAG i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73844015 170 - 130959383 GAAAT----GTTCACCTAAGTGCTACCTGGCTCTCTTCGGGTCCTCCGCACTGGGG-AGAAG-------GGCCCCACCTTA--CCTCCAGGGCCTGGGC---CTCAACTCTTACCTTAAGCGCCCATCAGCAATGCTTCCTTTATCCACTTTAGTGACAAATATGCCACAGTCCCCCGGGAAACAAG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75405111 170 - 133195287 GAAAT----GTTCACCTAAGTGCTACCTGGCTCTCTTCGGGTCCTCCGCACTGGGG-AGAAG-------GGCCCCACCTTA--CCTCCAGGGCCTGGGC---CTCAACTCTTACCTTAAGCGCCCATCAGCAATGCTTCCTTTATCCACTTTAGTGACAAATATGCCACAGTCCCCCGGGAAACAAG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73269888 170 - 125196307 GAAAT----GTTCACCTAAGTGCTACCTGGCTCTCTTCGGGTCCTCCGCACTGGGG-AGAAG-------GGCCCCACCTTA--CCTCCAGGGCCTGGGC---CTCAACTCTTACCTTAAGCGCCCATCAGCAATGCTTCCTTTATCCACTTTAGTGACAAATATGCCACAGTCCCCCGGGAAACAAG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72102173 170 - 125710982 GAAAT----GTTCACCTAAGTGCTACCTGGCTCTCTTCGGGTCCTCCGCACTGGGG-AGAAG-------GGCCCCACCTTG--CCTCCAGGGCCTGGGC---CTCAACTCTTACCTTAAGCGCCCATCAGCAATGCTTCCTTTATCCACTTTAGTGACAAATATGCCACAGTCCCCCGGGAAACAAG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75560190 170 - 121768101 GAAAC----GTTCACCTAAGTGCTACCTGGCTCTCTTCGGGTCCTCTGCACTGGGG-AGAAG-------GGCCCCACCTTT--CCTCCAGAGCCTGCAC---CTCAACTCTTACCTTAAACGGCCATCAGCAATGCTTCCTTTGTCCACTTTAGTGACAAATATGCCACAGTCCCCCGGGAAACAAG i calJac3.chr12 C 0 C 0 s mm10.chr14 24165135 182 + 124902244 GACAT----GGTCACTTTGCTGCCAGCTGTCCTCCTCGGAGTGCTCTACATTGGGT-AGCAGCACCCCCCACCCCACCCCAGCCCTCCAAGGGCTGGATCTGCTCAGCTCTTACCTTAAGCGACCATCAGCAATGCTTCCTTTATCCACTTTAGTAACAAATATGCCGCAATCCCCTGGGAAACAAG i mm10.chr14 C 0 C 0 s canFam3.chr4 27720902 169 + 88276631 GGTGT----GCTCAGTTAACTGCCGCCTGGCTCTCT--GGGTCCCTCACAAAGGGTCAGAGG-------GGCCCCCTC-----CCTCCAGAGCCTGGGCCTCCTCAACCCTTACCGTAAGCGGCCATCAGCAATGCTTCCTTTGTCCACTTTAGTGACAAATATCCCACAGTCCCCAGGCAAACAAG i canFam3.chr4 C 0 C 0 e nomLeu3.chr18 35050958 100 + 104879549 M a score=1134696.000000 s hg38.chr10_KI270825v1_alt 68981 311 + 188315 GCTCATTCACACCTTCTGCCATATCAAACCCCAGTGCCTTCAAGTCAATATCCTCCTGCAAAAACAGC------AGCAACAGCAACGCATTTCACAAAGCAGTGA-CAGAGACATTTGGCTCTTAAGCCCCGAAGCTGCCCACTCCAATGTGGGGGACTGTCCCTTCACCTCATCTGATAAGACACTCCATCCCCAGGATGGAAACCTATGAGTATCTGCAACCTGCCCCTTCTGGCCACTGCAGACAGACATCCCTGTCAGCG----TCCTCCG-------------AGGACCCTGCCCTTC--------------------------------------------CCCAGCTGCAACCCAGCCTGGACAGC-TGCTGG s panTro4.chr10 76440078 311 + 133524379 GCTCATTCACACCTTCTGCCATATCAAACCCCAGTGCCTTCAAGTCAATATCCTCCTGCAAAAACAGC------AGCAACAGCAACGCATTTCACAAAGCAGTGA-CAGAGACATTTGGCTCTTAAGCCCCAAAGCTGCCCACTCCAATGTGGGGGACTGTCCCTTCACCTCATCTGATAAGACACTCCATCCCCAGGATGGAAACCTATGAGTATCTGCAACCTGCCCCTTCTGGCCACTGCAGACAGACATCCCTGTCAGCG----TCCTCCG-------------AGGACCCTGCCTTTC--------------------------------------------CCCAGCTGCAACCCAGCCTGGACAGC-TGCTGG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76109477 311 - 133410057 GTTCATTCACACCTTCTGCCATATCAAACCCCAGTGCCTTCAAGTCAATATCCTCCTGCAAAAACAGC------AGCAACAGCAACGCATTTCACAAAGCAGTGA-CAGAGACATTTGGCTCTTAAGCCCCGAAGCTGCTCACTCCAATGTGGGGGACTGTCCCTTCACCCCATCTGATAAGACACTCCATCCCCAGGATGGAAACCTGTGAGTATCGGCAACCTGCCCCTTCTGGCCACTGCAGACAGACATCCCTGTCAGCG----TCCTCCG-------------AGGACCCTGCCCTTC--------------------------------------------CCTGGCTGCAACCCAGCCTGGACAGC-TGCTGG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35051058 311 + 104879549 GCTCATTCACACCTTCTGCCATATCAAACCCCAGTGCCTTCAAGTCAATATCCTCCTGCAAAAACAGC------AGCAACAGCAACGCATTTCACAAAGCAGTGA-CAGAGACATTTGGCTCTTAAGCCCCCAAGCTGCTCACTCCAATGTGGGGGACTGTCCCTTCGCCTCATCTGATAAGACACTCCATCCCCAGGATGGAAACCTATGAGTATCTGCAACCTGCCCCTTCTGGCCACTGCAGACAGACATCCCTGTCAGCG----TACTCCA-------------AGGACCCTGCCCTTC--------------------------------------------TCCGGATGCAACCCAGCCTGGACAGC-TGCTGG i nomLeu3.chr18 M 100 C 0 s rheMac3.chr9 73844185 311 - 130959383 GCTCATTCACACCTTCTGCCATATCAAACCCCAGTGCCTTCAAGTCAATATCCTCCTGCAAAAACAGC------AGCAACAGCAACGCATTTCACCAAGCAGTGA-CAGAAACATTTGGCTCTTAAGCCCCTGAGCTGCTCACTCCAATGTGGGGGACTGTCCCTTCACCTCATCTGATGAGACACTCCATCCCCAGGATGGAAACCTATGAGTACCTGCAACCTGCCCCTTCTGGCCACTGCAGACAGACATCCCTGTCAGCG----TCCCCCC-------------AGGACCCTGCCCTTC--------------------------------------------CCCGGCTGCAACCCAGCCTGGACAGC-TGCCGG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75405281 311 - 133195287 GCTCATTCACACCTTCTGCCATATCAAACCCCAGTGCCTTCAAGTCAATATCCTCCTGCAAAAACAGC------AGCAACAGCAACGCATTTCACAAAGCAGTGA-CAGAAACATTTGGCTCTTAAGCCCCTGAGCTGCTCACTCCAATGTGGGGGACTGTCCCTTCACCTCATCTGATGAGACACTCCATCCCCAGGATGGAAACCTATGAGTACCTGCAACCTGCCCCTTCTGGCCACTGCAGACAGACATCCCTGTCAGCG----TCCCCCC-------------AGGACCCTGCCCTTC--------------------------------------------CCCGGCTGCAACCCAGCCTGGACAGC-TGCCGG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73270058 311 - 125196307 GCTCATTCACACCTTCTGCCATATCAAACCCCAGTGCCTTCAAGTCAATATCCTCCTGcaaaaacagc------agcaacagcaacgCATTTCACAAAGCAGTGA-CAGAAACATTTGGCTCTTAAGCCCCTGAGCTGCTCACTCCAATGTGGGGGACTGTCCCTTCACCTCATCTGATGAGACACTCCATCCCCAAGATGGAAACCTATGAGTACCTGCAATCTGCCCCTTCTGGCCACTGCAGACAGACATCCCTGTCAGCA----TCCCCCC-------------AGGACCCTGCCCTTC--------------------------------------------CCCGGCTGCAACCCAGCCTGGACAGC-TGCCGG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72102343 311 - 125710982 GCTCATTCACACCTTCTGCCATATCAAACCCCAGTGCCTTCAAGTCAATATCCTCCTACAAAAACAGC------AGCAACAGCAACGCATTTCACAAAGCAGTGA-CAGAAACATTTGGCTCTTAAGCCCCCGAGCTGCTCACTCCAATGTGGGGGACTGTCCCTTCACCTCATCTGATGAGACACTCCATCCCCAGGATGGAAACCTATGAGTACCTGCAACCTGCCCCTTCTGGCCACTGCAGACAGACATCCCTGTCAGCG----TCCCCCC-------------AGGACCCTGCCCTTC--------------------------------------------CCTGACTGCAACCCAGCCTGGACAGC-TGCTGG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75560360 317 - 121768101 GCTCATTCACACCTTCTGCCATATCAAACCCAAGTGCCTTCAAGTCAATATCCTCCTGTAAAAACAGCAGGATTAGCAGTAGCAGCATACTTCACAAAGCAGTGA-CAGAGGCCGTTGGCTCTTCAGCCCCCAAGCTGCGCACTCAAATGTGGGGAACCATCCCTTTACCTCATCTGATGAGACACTCCATCCCCAGGATGGAAACCTATGTGTACCTGCAACTTGCCATTTCTGACCACTACAGACAGACATCCCTGTCAGCT----TCCCCAC-------------AGCACCGTACCCTTC--------------------------------------------CCTGGCTGCAACCCAGTCTAAACAGC-TGCTGG i calJac3.chr12 C 0 C 0 s mm10.chr14 24165317 293 + 124902244 GCTCATTCACGCCTTCTGCCATGTCAAACCCAAGTGCTTTCAAGTCAATATCCTCCTGTCAAAACAGC------ACCAGCAGA-----TCTTTACCAAACAAAGA-GAAGAA-------------AGACCCTAAACCGCAAGC------------------------------------GAGGCATTCAAACCTTGAGGTGGACTTGAACGAACAGCTGT-ACCTGCCCGTTCCAGCCACTG----CAGATATCCCTGTGAGTG----TCGCCCCTGGTCTTTCACTGGGGACTCTGCCTTCCATGGGATTTGTCAACACC-------------ACCATAAG----ATACAGCGGTAGCCCAGCTTGGATAGtatgctgg i mm10.chr14 C 0 I 507 s canFam3.chr4 27721071 351 + 88276631 GCTCATTCACACCTTCCGCCATATCGAACCCAAGTGCTTTCAAGTCAATATCCTCCTGTCAAAAGAAC------AGC---AGCCACACACTTTACAAAGCAGTGATTAGAAATATCCCACTCTTAAAGCTC-AGGCCACTGGCCACCGT---GAGGACTGGCCCTTCACCAGGTCGGACGGGGCGCTCAGTCCCCAGGAC-GAAGCCCGGGGGCAGCTGCCATCTGCCCCTTCCAGCCACTGCAGACACACGTCCCTG-CAGCAGGGCTCTGCTC-------------TGCCCTCCACCCTCCACGCGTGGTGCCAGCATCTGCCGCTGGAGAGGCCACAGGGACCAACCTGCCATGAGCCAGCTTGGACAAC-CACAGC i canFam3.chr4 C 0 C 0 a score=282840.000000 s hg38.chr10_KI270825v1_alt 69292 97 + 188315 GAAAGGATGCC-TCACACTCCTGGGAGGAAAAGGAGAACCTCCAA-ACTTGGAGTGGTGAAACTGGGAGATACTGCAAGCGGGTCACCGTCTCCTCCTT s panTro4.chr10 76440389 97 + 133524379 GAAAGGATGCC-TCACACTCCTGGGAGGAAAAGGAGAACCTCCAA-ACTTGGAGTGGTGAAACTGGGAGATACTGCAAGCGGGTCACTGTCTCCTCCTT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76109788 98 - 133410057 GAAAGGATGCCTTCACACTCCTGGGAGAAAAAGGAGAACCTCCAA-ACTTGGAGTGGTGAAACTGGGAGACACTGCAAGAGGGTCACCCACTCCTCCCT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35051369 90 + 104879549 GAAAGGATGCCTTCACACGCCTGGGAGGAAAAGGAGAACCTCCAA-ACTTGGAGTGGTGAA--------ATACTGCAAGAGGGTCACCCTCTCCTCCCT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73844496 93 - 130959383 GAAAGGATGCCGTCACACTCCTGGGAGGAAAAGGAGAACCTCCAA-ACT-----TGTTGAAACTGGGAGATACTGCAAGAGGGTCACCTTCTCCTCCCT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75405592 93 - 133195287 GAAAGGATGCCGTCACACTCCTGGGAGGAAAAGGAGAACCTCCAA-ACT-----TGTTGAAACTGGGAGATACTGCAAGAGGGTCACCTTCTCCTCCCT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73270369 93 - 125196307 GAAAGGATGCTGTCACACTCCTGGGAGGAAAAGGAGAACCTCCAA-ACT-----TGTTGAAACTGGGAGATACTGCAAGAGGGTCACCTTCTCCTCCCT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72102654 98 - 125710982 GAAAGGATGCCATCGCACTCCTGGGAGGAAAAGGAAAACCTCCAA-ACTTGGAGTGGTGAAACTGGGAGATACTGCAAGAGGGTCACCTTCTCCTCCCT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75560677 98 - 121768101 GAAAGGATGCCTTCGCACTCCTGCGGGGGAAAGGAGACCCTCCAA-ACTTGGAGCAGTGAAACTGGGGGATACTGCAAGAGGGCCATCGTCTCCTCCCT i calJac3.chr12 C 0 C 0 s canFam3.chr4 27721422 99 + 88276631 GAAAGGATGCGTGTGCTCCGGCAGGAAGGGAAGCTGAAGCTTCAACACTGACAGCCATGACCCTGGGGAACCCCACAAGGGGGCCACCATCTCCCACCC i canFam3.chr4 C 0 C 0 e mm10.chr14 24165610 507 + 124902244 I a score=811948.000000 s hg38.chr10_KI270825v1_alt 69389 176 + 188315 -------CATCCA-----------TCA--GAGAAGGAGAGAAGAACCATCAGAGGCAGCTTACCGTCTCCCTCTCGAACTCTACAACTTCCGTTTCCCACTCCATGGAATCCGTGTCAATGGCCGAGTCGTGGGAGCTGTGGGCCATCAGCTGTCGGAACCGGGCCTCCTTTTCCAACTGGGATTCC-ATCTGTTCC s panTro4.chr10 76440486 176 + 133524379 -------CATCCA-----------TCA--GAGAAGGAGAGAAGAACCATCAGAGGCAGCTTACCGTCTCCCTCTCGAACTCTACAACTTCCGTTTCCCACTCCATGGAATCCGTGTCAATGGCCGAGTCGTGGGAGCTGTGGGCCATCAGCTGTCGGAACCGGGCCTCCTTTTCCAACTGGGATTCC-ATCTGTTCC i panTro4.chr10 C 0 I 6621 s ponAbe2.chr10 76109886 176 - 133410057 -------CATCCA-----------TCA--GAGAAGGAGAGAAGAACCATCAGAGGCAGCTTACCGTCTCCCTCTCGAACTCTACAACTTCCGTTTCCCACTCCATGGAATCCGTGTCAATGGCCGAGTCGTGGGAGCTGTGGGCCATCAGCTGCCGGAACCGGGCCTCCTTTTCCAACTGGGATTCC-ATCTGTTCC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35051459 176 + 104879549 -------CATCCA-----------TCA--GAGAAGGAGAGAAGAACCATTAGAGGCAGCTTACCGTCTCCCTCTCGAACTCTACAACTTCCGTTTCCCACTCCATGGAATCCGTGTCAATGGCCGAGTCGTGGGAGCTGTGGGCCATCAGCTGCCGGAACCGGGCCTCCTTTTCCAACTGGGATTCC-ATCTGTTCC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73844589 176 - 130959383 -------CATCCA-----------TCA--GAGAAGGAGAGAAGAACCATCAGAGGCAGCTTACCGTCTCCCTCTCAAACTCTACAACTTCCGTTTCCCACTCCATGGAATCCGTGTCAATGGCCGAGTCGTGGGAGCTGTGGGCCATCAGCTGCCGGAACCGGGCCTCCTTTTCCAACTGGGATTCC-ATCTGTTCC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75405685 176 - 133195287 -------CATCCA-----------TCA--GAGAAGGAGAGAAGAACCATCAGAGGCAGCTTACCGTCTCCCTCTCAAACTCTACAACTTCCGTTTCCCACTCCATGGAATCCGTGTCAATGGCCGAGTCGTGGGAGCTGTGGGCCATCAGCTGCCGGAACCGGGCCTCCTTTTCCAACTGGGATTCC-ATCTGTTCC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73270462 176 - 125196307 -------CATCCa-----------tca--gagaaggagagaagaaccATCAGAGGCAGCTTACCGTCTCCCTCTCAAACTCTACAACTTCCGTTTCCCACTCCATGGAATCCGTGTCAATGGCCGAGTCGTGGGAGCTGTGGGCCATCAGCTGCCGGAACCGGGCCTCCTTTTCCAACTGGGATTCC-ATCTGTTCC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72102752 176 - 125710982 -------CATCCA-----------TCA--GAGAAGGAGAGAAGAACCATCAGAGGCAGCTTACCGTCTCCCTCTCAAACTCTACAACTTCCGTTTCCCACTCCATGGAATCCGTGTCAATGGCCGAGTCGTGGGAGCTGTGGGCCATCAGCTGCCGGAACCGGGCCTCCTTTTCCAACTGGGATTCC-ATCTGTTCC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75560775 189 - 121768101 -------CATCCAAGGTTTTCACGTCAAGGAGAGCGGGAGAAGGACCATC-GGGGCAGCTTACCGTCTCCCTCTCGAACTCTACAACTTCAGTTTCCCACTCCATGGAATCCGTGTCAATGGCCGAGTCGTGGGAGCTGTGGGCCATCAGCTGCCGGAACCGGGCCTCCTTTTCCAACTGGGATTCCAATCTGCTCT i calJac3.chr12 C 0 C 0 s mm10.chr14 24166117 176 + 124902244 -------CACCCA-----------AGA--GAGAGGACAAGCACGGCCACCCAGGGCAGCTCACCGTCTCTCTCTCAAATTCCACAACTTCTGTCTCCCACTCCATGGAATCCGTGTCGATGGCTGAGTCGTGCGAACTGTGGGCCATCAGCTGCCGGAATCGGGCCTCCTTCTCCAGCTGACATTCC-ATCTGCTCC i mm10.chr14 I 507 C 0 s canFam3.chr4 27721521 182 + 88276631 CTGCCCAGAGTCA-----------GCA--GAGCAGGCAAGAAAAGGCAT-GGAGGCAGCTCACCGTCTCCCTTTCAAACTCCACAACTTCTGTTTCCCACTCCATGGAATCTGTGTCGATGGCCGAGTCGTGGGAGCTGTGGGCCATCAGCTGCCGGAACCGGGCCTCCTTTTCCAACTGGGATTCC-ATCTGCTCC i canFam3.chr4 C 0 C 0 a score=71129.000000 s hg38.chr10_KI270825v1_alt 69565 22 + 188315 CTGTGAACAGAGAGAGCCACGG s ponAbe2.chr10 76110062 22 - 133410057 CTGTGAACAGAGAGAGCCACGG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35051635 22 + 104879549 CTGTGAACAGAGAGAGCCATGG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73844765 22 - 130959383 CTGTGAAGAGAGAGAGCCATGG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75405861 22 - 133195287 CTGTGAAGAGAGAGAGCCATGG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73270638 22 - 125196307 CTGTGAAGAGAGAGAGCCATGG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72102928 22 - 125710982 CTGTGAAGAGAGAGAGTCATGG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75560964 22 - 121768101 CTGTGAACAGAGAGAGCTATGA i calJac3.chr12 C 0 C 0 s mm10.chr14 24166293 21 + 124902244 CTGTGAACACA-AGAGCTGTGG i mm10.chr14 C 0 I 2295 s canFam3.chr4 27721703 22 + 88276631 CTAGGAACAGAGAGGGCCATGG i canFam3.chr4 C 0 C 0 e panTro4.chr10 76440662 6621 + 133524379 I a score=234510.000000 s hg38.chr10_KI270825v1_alt 69587 103 + 188315 TGACAGCCCCTTGGGAGGTGAAACATCCCACCGC-GTAACGGCTCTGAACCTCACGAGGCAGGCCATTTGAAACAGCTAAAATGGGTTCCT--TTCCCCCTTGTTT----------- s ponAbe2.chr10 76110084 103 - 133410057 TGACAGTCCCTTGGGAGGTGAAACATCCCGCCGC-GTAATGGCTCTGAACCTCACGAGGCAGGCCATTCGAAAGAGCTAAAATGGGCTCCT--TTCCCCCTTGTTT----------- i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35051657 103 + 104879549 TGACAGCCCCTTGGGAGGTGAAACATCCCACCGT-GTAATGGCTCTGAACCTCACGAGGCAGGCTGTTTGAAAGAGCTAAAATGGGCTCCT--TTCCCCCTTGTTT----------- i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73844787 103 - 130959383 TGAAAGCCCCTTGGGAGGTGAAACATCCCACCGC-GTAACAGCTCTGAACCTCATGAGGCAGGCAGTTCGTGAGAGCTAAAACAGGTTCCT--TTCCCCGCTGTTT----------- i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75405883 103 - 133195287 TGAAAGCCCCTTGGGAGGTGAAACATCCCACCGC-GTATCAGCTCTGAACCTCATGAGGCAGGCAGTTCGTGAGAGCTAAAACAGGTTCCT--TTCCCCGCTGTTT----------- i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73270660 103 - 125196307 TGAAAGCCCCTTGGGAGGTGAAACATCCCACCGC-GTAACGGCTCTGAACCTCATGAGGCAGGCAGCTCGTGAGAGCTAAAACAGGTTCCT--TTCCCCACTGTTT----------- i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72102950 103 - 125710982 TGAAAGCCCCTTGGGAGGTGAAACATCCCACCGC-GTAACGGCTCTGAACCTCATGAGGCAGGCAGTTCGTGAGAGCTAAAATAGGCTCCT--TTCCCCACTGTTT----------- i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75560986 99 - 121768101 TGACAGCCCCTTGGGAGGTGAAACCTCCCACTGC-CTAACAGCTCTGAAC----TGAGGCAGGCCATTCGTGAGAGCTAAAACGGGCTCCT--TTCCCCCTTGTTT----------- i calJac3.chr12 C 0 C 0 s canFam3.chr4 27721725 104 + 88276631 CGACGGTCCCCTGGGAGGGGAAGCAGCTCGCCCCAGTCCCAGCTCTGAAGGTCAC-------------CACGAAGGCTCAATGGGGCTCCTTGTGCTCTCATACTTCATGCCAGCTT i canFam3.chr4 C 0 C 0 e mm10.chr14 24166314 2295 + 124902244 I e panTro4.chr10 76440662 6621 + 133524379 I a score=441076.000000 s hg38.chr10_KI270825v1_alt 69690 132 + 188315 CCCAATAACTC---AGAGTCAGGTCAAGGCTGCTGGGATATCTGTGAGTTTTCACAGTGGTTTTTt-aaaaaaga-caaattctccccaaatttatctagaggtttaacacaattaaaatcaaaatgccagctgggc s panTro4.chr10 76447283 132 + 133524379 CCCAATAACTC---AGAGTCAGGTCAAGGCTGCTGGGATATCTGTGAGTTTTCACAGTGGTTTTTt-aaaaaaga-caaattctccccaaatttatctagaggtttaacacaattaaaatcaaaatgccagctgggc i panTro4.chr10 I 6621 C 0 s ponAbe2.chr10 76110187 134 - 133410057 CCCAATAACTC-AGAGAGTCAGGTCAAGGCTTCTGGGATATATGTGAGTTTTCACAGTGGTTTTTt-aaaaaaga-caaattctccccaaatttatctagaggtttaacacaattaaaatcaaaatgccagccgggc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35051760 134 + 104879549 CCCAATAACTC-AGAGAGTCAGGTCAAGGCTTCTGGGATATCTGTGAGTTTTCACAGTGGTTTTTt-aaaaaaga-caaattctccccaaatttatctagagatttaacacaattaaaatcaaaatgccagccgggc i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73844890 135 - 130959383 CCCAATAACTC-GGAGACTCAGGTCAAGGCTTCTGGGGTATCTGTGAGTTTTCACAGTGGTTTTTTtaaaaaaga-caaattctccccaaatgtatctagaggtttaacacaattaaaatcaaaatgccagctgggc i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75405986 135 - 133195287 CCCAATAACTC-GGAGACTCAGGTCAAGGCTTCTGGGGTATCTGTGAGTTTTCACAGTGGTTTTTTtaaaaaaga-caaattctccccaaatttatctagaggtttaacacaattaaaatcaaaatgccagctgggc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73270763 135 - 125196307 CCCAGTAACTC-GGAGAGTCAGGTCAAGGCTTCTGGGGTATCTGTGAGTTTTCAcagtggtttttttaaaaaaga-caaattctccccaaatttatcTAGAGGTTTAAcacaattaaaatcaaaatgccagctgggc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72103053 135 - 125710982 CCCAATAACTC-GGAGAGTCAGGTCAAGGCTTCCAGGGTATCTGTGAGTTTTCACAGTGGTTTTTTAaaaaaaga-cacattctccccaaatttatctagaggtttaacacaattaaaattaaaatgccagctgggt i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75561085 134 - 121768101 CCCAATAACCC-AGAGAGTCAGGTCAAGGCTTCCGGGATATCTGTGAGTTTTCATAGCAATTTTTT-AAAAAAGA-CAAATTATCCCCAAATTTATCTAGAAGTTTAACACAATTaaaatcaaaatgccagctgggc i calJac3.chr12 C 0 C 0 s canFam3.chr4 27721829 123 + 88276631 CCCagtaaatctggagcagcatgccagagcttcttggatat--------------agaggttttcaaaaaaaagacccaagtcttcccaaatttatccagaggcttaatgcaattcctcaggaaatgccagcaagac i canFam3.chr4 C 0 I 210 e mm10.chr14 24166314 2295 + 124902244 I a score=189771.000000 s hg38.chr10_KI270825v1_alt 69822 69 + 188315 acagtggttcatgcct------------------gtaatcccagcactttgggaggccgagacaggcagatcaccagaagtcaggag s panTro4.chr10 76447415 69 + 133524379 acggtggttcatgcct------------------gtaatcccagcactttgggaggccgagacaggcagatcacctgaagtcaggag i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76110321 69 - 133410057 actgtggttcatgcct------------------gtaatcccagcactttgggaggctgagacaggcagatcacctgaagtcaggag i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35051894 69 + 104879549 acggtggttcatgcct------------------gtaatcccagcactttgggaggccgagacaggcagatcacctgaagtcaggag i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73845025 69 - 130959383 acggtggtccatacct------------------gtaatcccagcactttgggaggccgagatgggcagatcacctgaagtcaggag i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75406121 69 - 133195287 acgatggtccatacct------------------gtaatcccagcactttgggaggccgagatgggcagatcacctgaagtcaggag i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73270898 69 - 125196307 acggtggtccatacct------------------gtaatcccagcactttgggaggcccagacgggcagatcacctgaagtcaggag i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72103188 69 - 125710982 acagtggtccatacct------------------gtaatcccagcactttgggaggccgagatgggcagatcacctgaagtcaggag i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75561219 87 - 121768101 atggttgtgtgtgcctgtaacctagtgtgtgcccgtaaccccagctactcgggaggctgaggcaggagaatcacttgaacccgggag i calJac3.chr12 C 0 I 1585 e canFam3.chr4 27721952 210 + 88276631 I e mm10.chr14 24166314 2295 + 124902244 I a score=437024.000000 s hg38.chr10_KI270825v1_alt 69891 184 + 188315 tttgagaccagcctgaccgacatggtgaaacctcgtctctactaaaaatacaaaaattagccgggcgtggtggcatgtgcctgtaacctcggctactcaggaggcaggagaattacttgaatcagggaggcagaggttgcagggagtggaggtcacaccgctgcactccagcctggcgacagag s panTro4.chr10 76447484 182 + 133524379 tttgagaccagcctgaccgacatggtgaaacctcgtctctactaaaaatacaaa--ttagccgggcgtggtggcatgtgcctgtaacctcggctactcaggaggcaggagaattacttgaatcagggaggcagaggttgcagagagtggaggtcacaccgctgcactccagcctggcgacagag i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76110390 184 - 133410057 tttgagaccagcctgactgacatggtgaaaccttgtctctgctaaaaatacaaaaatcagctgggcctggtggcatgttcctgtaacctcagctactcgggaggcaggagaattacttgaatcagggaggcagaggttgcagggagtggaggtcacactgctgcactccagcctggtgacagag i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35051963 184 + 104879549 tttgagaccagcctgaccgacatggtgaaacctcgtcactactaaaaatacaaaaattagccgggcgtggtggcatgtgcctgtaacctcagctactcgggaggcaggagaattacttgaatcagggagacagaggttgcagggagtggtggtcacaccactgcactccagcctggtgacagag i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73845094 181 - 130959383 ttcgagaccagcctgactgacatggtgaaacctcgtctccactaaaaatgcaaaaattagctgggcgtggtggcatgtgcctgtaatctcagctactcgggaggcaggagaattacttgaatcagggaggtagaggttgcagggagtagaggtcacaccacggcactccaacctggcgaca--- i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75406190 184 - 133195287 ttcgagaccagcctgactgacatggtgaaacctcgtctccactaaaaatgcaaaaattagctgggcgtggtggcatgtgcctgtaatctcagctactcgggaggcaggagaattacttgaatcagggaggtagaggttgcagggagtagaggtcacaccacggcactccaacctggcgacagag i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73270967 184 - 125196307 ttcgagaccagcctgactgacatggtgaaacctcgtctccactaaaaatacaaaaattagctgggcgtggtggcatgtgcctgtaatctcagctacttgagaggcaggagaattacttgaaacagggaggtagaggttgcagggagtagaggtcacaccactgcactccaacctggcaacagag i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72103257 184 - 125710982 tttaagactagcctgactgacatggtaaaacctcatctccactaaaaatacaaaaattagctgggcgtggtggcatgcgcctgtaatctcagctactcgggaggcaggagaattacttgaatcagggaggtagaggttgcagggagtagaggtcacaccactgcactccagcctggcgacagag i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27721952 210 + 88276631 I e mm10.chr14 24166314 2295 + 124902244 I e calJac3.chr12 75561306 1585 - 121768101 I a score=1238681.000000 s hg38.chr10_KI270825v1_alt 70075 526 + 188315 tgaaactcca----tctcaaaaaaaaaa-taaaatttaatttaaaaaataaaatcaaaatgccaacaaga-tttttgtagatatagacggctattctaaaatgtatacaaaaaggcatcagaatcactaaaactattttgaaaatgactaaagtgggaggaaactctctacccaa-tttaagacttagtatacagctacagcaatcaagactgtgtgctgctgtcagggagacagacacacaggtctgtagaacagaataaggaacctaggaatgccc--caagtcaccaaaggtgc----ataagttaacagaggaaggacagcctccaactaatgatgctggagcgactgcacatccatggccaaagaaatgtatctcaacctaaaccacttaacctcggataaaagttaacgccaactatatcacaaattgaaatgcaaactgacagaagcagcaacagaaataccacttaaatagttatattaggatgaagatgtagttcttaacatttcctttaatgccattgttacaatttta s panTro4.chr10 76447666 523 + 133524379 tgaaactcca----tctcaaaaaaaaaaataaaatttaatttaaaaaataaaatcaaaatgccaacaaga-tttttgtagatatagacggctattctaaaatgtatacaaaaaggcatcagaatcactaaaactattttgaaaatgactaaagtgggaggaaactctctacccaa-tttaagacttagtatacagctacagcaatcaagactgggtgctgctgtcagggagacagacacacaggtctgtagaacagaataaggaacctaggaatgccc--caagtcaccaaaggtgc----ataagttaacagaggaaggacagcctccaactaatgatgctggagcgactgcacatccatggccaaagaaatgtatctcaacctaaaccacttaacctcggataaaa----acgccaactatatctcaaattgaaatgcaaactgacagaagcagcaacagaaatgccacttaaatagttatattaggatgaagatgtagttcttaacatttcctttaatgccattgttacaatttta i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76110574 525 - 133410057 tgaaactcca----cctcaaaaaaaaaa--aaaatttaatttaaaaaataaaatcaaaatgccaacaaga-tttttgtagatatagatggctattctaaaatgtatacaaaaaggcaacagaatcactaaaactattttgaaaatgactaaagtgggaggaaactctctacccaa-tttaagacttagtatacagctacagcaatcaagactgtgtgctgctgtcagggagacagacacaaaggtctgtagaacagaataaggaacctaggaatgccc--caagtcaccaaaggtgc----ataagttaacagaggaaggacagtctccaactaatgatgctggggcgactgcacatccatggccaaagaaatgaatctcaacctaaaccgcttaacctcggataaaagttaacgccaactatatcacaaattgaaatgcaaactgacagaagcagcaacagaaataccacttaaatagttatattaggatgaagatgtagttcttaacatttcctttaatgccattgttacaattttt i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35052147 507 + 104879549 tgaaactcca----tctcaaaaaagaat--aaaatttaatttaaaaaataaaatcaaaatgccaacaaga-tttttctagatatagacggctattctaaaatgtatacaaaaaggcatcagaatcactaaaactattttgaaaatgactaaagtgggaggaaactctctacccaa-tttaagacttagtatacagctacagcaatcaagactgtgtgctgctgtcagggagacagacacacaggtctgtagaacagaataaggaacctaggaatgccc--caagtcaccaaaggtgc----ataagttaacagaggaaggacagcctccaactaatgatgccggagcgcctgcacatccatagccaaagaaatgaatctcaacctaaactgct------------------aatgccaactatatcacaaattgaaatgcaaactgacagaagaagcaacagaaataccacttaaatagttatgttaggatgaagatgtagttcttaacatttcctttaatgccattgctacaatttta i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73845275 519 - 130959383 -gagactcca----tctcaaaagaataa----aatttaatttaaaaaataaaatcaaaatgccaacaagattttttgtagatacagacggctattctaaaatgtatacataaaggcatcagaatcgctaaaacaattttgaaaatgact-aagtgggaggaaactctctatccaa-tttaagatgtagtatacagctacagcaatcaagac--ggtgctgctgtcagggagacagacacacaggtctgtagaacagaataaggaacccaggaatgccc--caagctaccaaaggtgc----atacattaacagaggaaggacagcctccaattaatgatgctggagcgactacacatccatggccaaagaaatgaatctcaacctaaatcccttaacctcggataaaagttaacaccaa-tatatcacaaattgaaatgcaaactgacagaagcagcaacagaaatgccacttaaatagttatattaggatgaagacgtagttcttaacatttcctttaatgccattgttacactttta i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75406374 520 - 133195287 tgagactcca----tctcaaaagaataa----aatttaatttaaaaaataaaatcaaaatgccaacaagattttttgtagatatagacggctattctaaaatgtatacataaaggcatcagaatcgctaaaacaattttgaaaatgact-aagtgggaggaaactctctaaccaa-tttaagatgtagtatacagctacagcaatcaagac--ggtgctgctgtcagggagacagacacacaggtctgtagaacagaataaggaacccaggaatgccc--caagctaccaaaggtgc----atacattaacagaggaaggacagcctccaattaatgatgctggagcgactacacatccatggccaaaggaatgaatctcaacctaaatcccttaacctcggataaaagttaacaccaa-tatatcacaaattgaaatgcaaaCTGACAGAAGCAGCAACAGAAATGCCACTTAAATAGTTATATTAGGATGAAGACGTAGTTCTTAACATTTCCTTTAATGCCATTGTTACACTTTTA i macFas5.chr9 C 0 I 223 s papAnu2.chr9 73271151 517 - 125196307 tgagactcca----tctcaaaaaagtaa----aatttaatttaaaaaataaaatcaaaatgccaacaagattttttgtagatacagatggctattctaaaatgtatacataaaggCATCAGAAttgctaaaacaattttgaaaatgact-AAGTGGGAGGAAA--CTCTATCCAA-TTTAAGATGTAGTATACAGCTACAGCAATCAAGAC--GGTGCTGCTGTcagggagacagacacacaggtcTGTAGAACAGAATAAGGAACCCAGGAATGCCC--CAAGCTACCAAAGGTGC----ATACGTTAACGGAGGAAGGACAGCCTCCAATTAATGATGCTGGAGCGACTACACATCCATGGCCAAAGAAATGAATCTCAACCTAAATCCCTTAACCTCGGGTAAAAGTTAACACCAA-TATATCACAAATTGAAATGCAAACTGACAGAAGCAGCAACAGAAATGCCACTTAAATAGTTATATTAGGATGAAGACGTAGTTCTTAACATTTCCTTTAATGCCATTGTTACActttt- i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72103441 520 - 125710982 tgagactcca----tctcaaaagaataa----aatttaatttaaaaaataaaatcaaaatgccaacaagattttttatagatacagacggctattctaaagtgtatacaaaaaggcatcagaattgctaaaactattttgaaaatgact-aagtgggaggaaactctctacccaa-tttaagatttagtatacagctacagcaatcaagac--tgtgctgctgtcagggagacagacacacaggtctgtagaacagagtaagaaacccacgaatgccc--caagttaccaaaggtgc----atacgttaacagaggaaggacagcctccaattaatgatgctggagcgactacacatccatggccaaagaaatgaatctcaacctaaatcccttaacctcggataaaagttaacaccaa-tatatcacaaattgaaatgcaaaCTGACAGAAGCAGCAACAGAAATACCACTTAAATAGTTATATTAGGATGAAGACGTAGTTCTTAACATTTCCTTTAATGCCATTGTTACACTTTTA i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27722162 380 + 88276631 tgactctctgtgtctctcatgaataaat----aaattctttaaaaaaaaaaaa--------------------------------------------aaaaggaagaaagaaag------------------------tgaaaa--att-aagtgggaggaatgactctgcttgattttaagatgtttcctatagctacagaaatcacgactgtatggaattgccaggaagacagacatagagatcactgggacagaatgaagaatccagaaataccccacaaagtacaagagggaccaaagtacttcagtagacaaaggagagcattcaaccagcgatgctggagtaccagcacgccc--ggcaaaa------------atctgaagacaccaggacttacatagaaatcagctcaaaacatatcacagattggaatg--------------------------------------------gtaaaggtaaagctg-------taacatgt--ttcaagg----------------- i canFam3.chr4 I 210 C 0 e mm10.chr14 24166314 2295 + 124902244 I e calJac3.chr12 75561306 1585 - 121768101 I a score=42984.000000 s hg38.chr10_KI270825v1_alt 70601 29 + 188315 aaaaatgttcactgatggccggatgcgga s panTro4.chr10 76448189 29 + 133524379 aaaaatgttcactgatggccaggtgcgga i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76111099 29 - 133410057 aaaaatgttcactgatggccgggcgcgga i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35052654 29 + 104879549 aaaaatgttcactggtggccaggcgcgga i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73845794 29 - 130959383 aaaaatgttcactgatggcgacacgtggt i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75407117 29 - 133195287 AAAAATGTTCACTGATggccaggcgtggt i macFas5.chr9 I 223 C 0 s chlSab2.chr9 72103961 29 - 125710982 AAAAATGTTCACTGATggccaggcgtggt i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27722542 8 + 88276631 gaaaatat--------------------- i canFam3.chr4 C 0 C 0 e mm10.chr14 24166314 2295 + 124902244 I e calJac3.chr12 75561306 1585 - 121768101 I e papAnu2.chr9 73271668 0 - 125196307 C a score=511735.000000 s hg38.chr10_KI270825v1_alt 70630 253 + 188315 ggctcacgcctgtaatcccagcacttcaggaggcagaggtaagtggatcacttgaggtcaggggttcaagaccagcctggccaacatggtaaaacc----ccgtctctacc---aaaaatacaaaaattagc--caggtgt----ggtaacatgcacctgtaa-------tcccagctactcaggaggctgaggtacaagaatcacctgaacccaggaagcaga----------------ggttgcagtaagc-------aaagactatac-c--actgcactctagcctgggc----------------atctc s panTro4.chr10 76448218 253 + 133524379 ggctcacgcctgtaatcccagcacttcaggaggcagaggtaagtggatcacttgaggtcaggggttcaagaccagcctggccaacatggtaaaacc----ccgtctctact---aaaaatacaaaaattagc--caggtgt----ggtaacatgcacctgtaa-------tcccagctactcaggaggctgaggcacaagaatcacctgaacccaggaagcaga----------------ggttgcagtgagc-------aaagactatac-c--actgcactccagcctgggc----------------atctc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76111128 253 - 133410057 ggctcacgcctgtaatcccagcacttcaggaggcagaggtaggcggatcacttgaggtcaggagttcaagaccagcctggccaatatggtgaaacc----ccgtctctact---aaaaatacaaaaattagc--caggtgt----gttaacatgcacctgtaa-------tcccagctactcaggaggctgaggcacaagaatcacttgaacctgggaagcaga----------------gattgcagtgagc-------aaaggctatac-c--actgcactccagcctgggc----------------atctc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35052683 253 + 104879549 agctcatgcctgtaatcccagcacttcaggaggcagaggtaggcggatcacttgaggtcaggagttcaagaccagcctggccaacatggtgaaact----ccatctctact---aaaaatacaaaaattagc--caggtgt----ggtaacatgcacctgtaa-------tcccagctactcaggaggctgaggcacaagaatcacttaaatccgggaagcaga----------------ggttgcagtgagc-------aaagactatac-c--actgcactccagcctgggc----------------atctc i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73845823 269 - 130959383 ggctcatgcctgtaatcccaacacttcaggaggccgaggtgggtagatcacttgaggccaggagttcaagaccagcctggccaacatggtgaaatc----ccgtctctact---aaaaacacagaagttagg--caggtgt----ggtgacacgcacctgtaa-------tcccagctacttgggagactgaggcacaagaatcacttgaacccaggaagcaga----------------ggttgcagtgagc-------aaagactagac-c--actgccctccagcctgggcaatagagtgaaactgcacctt i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75407146 269 - 133195287 ggctcatgcctgtaatcccaacacttcaggaggccgaggtgggtggatcacttgaggccaggagttcaagaccagcctggccaacatggtgaaatc----ccgtctctact---aaaaacacagaagttagg--caggtgt----ggtgacatgcacctgtaa-------tcccagctacttgggagactgaggcacaagaatcacttgaacccaggaagcaga----------------ggttgcagtgagc-------aaagactatac-c--actgccctccagcctgggcaatagagtgaaactgcatctt i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73271668 269 - 125196307 ggctcatgcctgtaatcccaacacttcaggaggccgaggtgggtggatcacttgaggccaggagttcaagaccagcctggccaacatggtgaaatc----ccgtctctact---aaaaacacagaagttagg--caggtgt----ggtgacatgcacctgtaa-------tcccagctacttgggagactgaggcacaagaatcacttgaacccaggaagcaga----------------ggttgcagtgagc-------aaagactatac-c--actgcaccccagcctgggcaatagagtgaaactgcatctt i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72103990 265 - 125710982 ggcctatgcccgtaatcccaacacttcaggaggccgaggtgggtggatcacttgaggccaggagttcaagaccagcctggccaacatggtgaaacc----tcgtctccact---aaaaatacagaagttagc--caggtgt----ggtgg---gcacctgtaa-------tcccagctactcgggaggctgaggcacaagactcacttgaacccgggaagcaga----------------ggttgcagtgagc-------aaagactatac-caaaatgcactccagcctgggc--tggagtgaaactgcattt- i chlSab2.chr9 C 0 C 0 s mm10.chr14 24168609 262 + 124902244 ggcacactccagtaaccccaacact----gaggctgaggcaggagagt-------ggt---gagttaaaggccagcctggct-acatggtaagaccctgaccgccccccctcaaaaaaaaacaaaaCAAAAA--CAAgagctaagggtgtcacttggtggtaaaatgcttgcctagcatctta--aggctctggttc--gaatc-ccagGTCTAGGGAAACAAACAGCCTTGATGCTAACAGTTACAGGGGACGctttttagataccatacat--aacagactctt----------------------------- i mm10.chr14 I 2295 C 0 s canFam3.chr4 27722550 74 + 88276631 -----------------------ctttgagatgtagca-------------ttaaggttaagggtt---------cttagtaacca---tacaatc----c-------att---aaaaattaacaattaagaatca----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- i canFam3.chr4 C 0 C 0 e calJac3.chr12 75561306 1585 - 121768101 I a score=1204061.000000 s hg38.chr10_KI270825v1_alt 70883 360 + 188315 aaaaa---aaaaaa--tttgatagatttgacttcatcaaaattataaatattagctcagagaaagacctagtaatgaagatgtgaaagagagactcagaAGCCTCGTTATATCCTCAGGTGACTTGCCTGTGACACC---CT---TCCTGAAATCTGGGCCCAGGCTG---CCTTGCCAGCTCATGAACACTGCCCACTGGGCTCC-----------TGACCTACTTGTGTTTCCTGCTCCAGCAGACAGGCCC-CAGGGCCGCACCTTTGCCTAGGCTGTGCTCTCACCAGCCAGCTCTAGAATGC-CACTCAGCCTCCAGGGCAGAGCTCCAATGCCTTCCAACACTGCCCCAGCCCCTCCCCAGGCCAGTGCAG-CT--GAGCTCAG s panTro4.chr10 76448471 362 + 133524379 aaaaa---aaaaaaaatttgatagatttgacttcatcaaaattataaatattagctcagagaaagacctagtaatgaagatgtgaaagggagactcagaAGCCTCGTTATATCCTCAGGTGACTTGCCTGTGACACC---CT---TCCTGAAATCTGGGCCCAGGCTG---CCTTGCCAGCTCATGAACACTGCCCACTGGGCTCC-----------TGACCTACTTGTGTTTCCTGCTCCAGCAGACAGGCCC-CAGGGCCGCACCTTTGCCTAGGCTGTGCTCTCACCAGCCAGCTCTAGAATGC-CACTCAGCCTCCAGGGCAGAGCTCCAATGCCTTCCAACACTGCCCCAGCCCCTCCCCAGGCCAGTGCAG-CT--GAGCTCAG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76111381 365 - 133410057 aaaaaaacaaaaaaaaattgatagatttgacttgatcaaaattataaatattagctctgagaaagacctagtaatgaagatgtgaaagagagactcagaGGCCTCGTTAAATCCTCAGGTGACTTGCCTGTGACACC---CT---TCCTGAAATCTGGGCCCAGGCTG---CCTTGCCAGCTCATGAACGCTGCCCACTGGGCTCC-----------TGACCTACTTGTGTTTCCTGCTCCAGCAGACAGGCTC-CAGGGCCACACCTTTGCCTAGGCTGTGCTCTCACCAGCCAGCTCTAGAATGC-CACTCAGCCTCCAGGGCAGAGCTCCAATGCCTTCCAACGCTGCCCCAGCCCCTCCCCAGGCCAGTACAG-CC--GAGCTCAG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35052936 360 + 104879549 aaaaa---aaaaaa--tttgatagatttgacttcatcaaaattataaatattagctctgagaaagacctagtaatgaagatgtgaaagacagactcagaAGCCTCGTTATATCCTCAGGTAACTTGCCTGTGACACC---CT---TCCTGAAATCTGGGCCCAGGCTG---CCTTGCCAGCTCATGAACGCTGCCCACTGGGCTCC-----------TGACCTACTTGTGTTTCCTACTCCAGCAGACAGGCTC-CAGGGCCGCACCTTTGCCTAGGCTGTGCTCTCACTAGCCAGCTCTAGAATGC-CACTCAGCCTCCAGGGCAGAGCTCCAATGCCTTCCAACGCTGCCCCAGCCCCTCCCCAGGCCAGTGCAG-CT--GAGCTCAG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73846092 358 - 130959383 aaaaa---aaaaaaaa---gataggtttgacttcatcaaaattaaaaatactagttctgagaaagacccagtaacaaggatgtgaaagagagactcagaAGCCTCATCATATCCTCAGGTGACTGGCCTGTGACACC---CT---CCCTGAAATCTGGGTCCAGGCTG---CCTTGCCAGCTCATGAAAGCTGCCCACTGAGCTCC-----------TGACCTACTTGTGTTTCTTGCTCCAGCAGACAAGCTC-CAGGGCCGCACCTCTGCCTAGGCTGTGCTCTCACCAGCCGGCTCTAGAATAC-CACTCAGCCTCCAGGGCAGAGCTCCAATGCCTTCCAA-GCTGCCCCAACCCCTCCCCAGGCCAATGCAG-CC--AAGCTCAG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75407415 357 - 133195287 -aaaa---aaaaaaaa---gataggtttgacttcatcaaaattaaaaatactagttctgagaaagacccagtaacaaggatgtgaaagagagactcagaAGCCTCATTATATCCTCAGGTGACTGGCCTGTGACACC---CT---CCATGAAATCTGGGTCCAGGCTG---CCTTGCCAGCTCATGAAAGCTGCCCACTGGGCTCC-----------TGACCTACTTGTGTTTCTTGCTCCAGCAGACAAGCTC-CAGGGCCGCACCTCTGCCTAGGCTGTGCTCTCACCAGCCGGCTCTAGAATAC-CACTCAGCCTCCAGGGCAGAGCTCCAATGCCTTCCAA-GCTGCCCCAACCCCTCCCCAGGCCAATGCAG-CC--GAGCTCAG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73271937 358 - 125196307 aaaaa---aaaaaaaa---gataggtttgacttcatcaaaattaaaaatactagtTCTGAGAAAGACCCAGTAACAAGGATGTGAAAGAGAGACTCAGAAGCCTCATTATATCCTCAGGTGACTGGCCTGTGACACC---CT---CCCTGAAATCTGGGTCCAGGCTG---CCTTGCCAGCTCATGAAAGCTGCCCACTGGGCTCC-----------TGACCTACTTGTGTTTCCTGCTCCAGCAGACAAGCTC-CAGGGCCGCACCTCTGCCTAGGCTGTGCTCTCACCAGCCGGCTCTAGAATAC-CACTCAGCCTCCAGGGCAGAGCTCCAATGCCTTCCAA-GTTGCCCCAACCCCTCCCCAGGCCAATGCAG-CC--GAGCTCAG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72104255 361 - 125710982 -aaaa---aaaaaaaa---agtaggtttgacttcatcaaaattaaaaataatagctctgagaaagacccagtaatgaggatgtgaaagagagactcagaAGCCTCATTATATCCTCAGGTGACTGGCCTGTGACACC---CT---CCCTGAAATCTGGGTCCAGGCTGGGTCCTTGCCAGCTCATGAACGCTGCCCACTGGGCTCC-----------TGACCTACTTGTGTTTCCTGCTCCAGCAGACAAGCTC-CAGGGCCGCACTTCTGCCTAGGCTGTGCTCTCACCAGCCGGCTCTAGAATGC-CACTCAGCCTCCAGGGCAGAGCTCCAATGCCTTCCAACGCTGCCCCAGCCCCTCCCCAGGCCAATGCAG-CC--GAGCTTAG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75562891 360 - 121768101 aaaaa---aaaaaaaa---aatagatttcacttcaacaaaattaaaaatgttagctctgagaaaaacccagtaaagaggatgtgaaagagagactCGGAAGCCTTGTTACATCCTCAGGTGATTTGCTTGTGACACC---CT---TCCTGAAATCTGGGCCCAGGCTG---CCTTGCCAGCTCATGAACACTGCCCACCGGGCTCC-----------TGACCTACTTGTGTTTCCTGCTCCAGCAGACAGGCTC-CAGAGCCACACCTTTGCCTAGGCTGTGCTCTCCCCAGCCAGCTCTAGAGCAT-CACTCAGCCTCCAGGGCAGAGCTCTAATGTCTTCCAACGCTGCCCCATACCCTCCCCAGGCCAGTGCAATCC--AAGCTCAG i calJac3.chr12 I 1585 C 0 s mm10.chr14 24168871 321 + 124902244 ----------taaatt---aacaacttggacttcatcaaaattaaaaactttaactatgggagacattcagtaaagaagatg-gaaaga-aaaccaagacCACTTATCACAGAGC--GGTGACTGACACATGATAGCCGACT---TTCTAATATCTGGGCCCAGGCTG---CCTTA--AGTCTGTCCACACTGCCGGCTGACATATAAG--------GGACCTCCTTGTCT-------CCCTAAGAATAGGCTG-CAAGGCTGTACCTTTGCCCTGGCTGTTCTCG--------GGCTATGGGCTGCTCACTTAGTCTCC-------------TATCCCTCCTTCTGGGCCCCCCGCCCATCCCCA--CCAGGACAG-TG--AGGTTC-- i mm10.chr14 C 0 C 0 s canFam3.chr4 27722624 353 + 88276631 --------------------ataaatgggacttgattaaa-----aaatttaagctcccagaaagatccagtcaggagattg---aaaaaataTCCAGAAACCTGGTACCAACACCTAGCAACTTACACCTGACACC---TCTGGTCCTAAAACCCATGCCCCGATGA---CCTTTCCATCTCATCAACGCTACCCTCTGGGCTCCGGGCACACTCATGACCTCTTCCTGGTTCCTGCTCAAGTGGACATGCTCACAGGTCCACGCTTCCATCTGGGCTGTGCTCTCACGGGCCAGCTCCAGAACGC-TACTTAGCCT-CAGGGCAGAGCCCCCAGAGCCTCCTTCCTGGGACATGGCTCCCACCAGCCCTGTGCAG-CCTGGAGCTCTG i canFam3.chr4 C 0 I 230 a score=54123.000000 s hg38.chr10_KI270825v1_alt 71243 19 + 188315 CATTCATTGCTCACTATAC s panTro4.chr10 76448833 19 + 133524379 CATTCAATGCTCACTATAC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76111746 19 - 133410057 CATTCAATGCTCACTATAC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35053296 19 + 104879549 CATTCAATGCTCACTTTCC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73846450 19 - 130959383 CATTCAATGCTCCCTATAC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75407772 19 - 133195287 CATTCAATGCTCCCTATAC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73272295 19 - 125196307 CATTCAATGCTCCCTATAC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72104616 19 - 125710982 CATTCAATGCTCACTATAC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75563251 19 - 121768101 CCTTCAATGCTCCCCATAC i calJac3.chr12 C 0 C 0 s mm10.chr14 24169192 19 + 124902244 CACCGGATGCTCCACACTG i mm10.chr14 C 0 C 0 e canFam3.chr4 27722977 230 + 88276631 I a score=3545661.000000 s hg38.chr10_KI270825v1_alt 71262 1107 + 188315 CTG---------TCTCATCT---GGCATTACCAGGGA-----GTGC------------CTGAGGCTTCCCAGGCAGCA-ACACAGACCCCCTCACCAGCATCCTGCCAGTTAGAGAAC-TTAGCAGACAGGAGGCACAAATGCAAACATGCTGAATGAACACACAAGCTGAATGC---------ACAAGCTTCAGGCAACTCTGGCCCAAACAAGAGGCAAAATGTCCCAT---GTTCACGG--CCAGAGATTCTAGGCTTTCCCTTCGAA-GAGAACCCCTTGA--TTCCATCACATTGCTAGAC-------------------------------CCAAGA--------------------------------------------T-GGTTCCTGTGAAGAGTCTTGC-C---TTGCCTCTTAACCCCTATAATATTCCTGAGAGCACCCAAGCTCCAGAGAGTCTGGGTTTTTATAGAATAAATGGAGCTCTTTGTCTCAT-TAGGAATTTTACTGA--ATGGGAAAGAAGAGAAGC---TGTCACTCCCTTCTGACGGGCAGCACTTGAG---TGTGCAAGGCTTGCACA-CTTGCACTCACACACGAGCTTCTCACTGCCCCCTCACCACACTAACAGCTAGGGAAATGTCGCACAATGGATGGAGAGCCACTGCTTTCCTACTAGATTTGGGTTTTAGAC-CAC-----GGCCTATT---GGGCTCTGCCAATTTCTATGCTTAAACCCTGATCTTTGTA-TTTCAATG-CACTACTAAAGGCCACTGAGTGT--TTAAATGACACCCTGGGAGGC--TGCTGTAATCGAGGGGAGGATGTCTGACACCCCAAATGG--TCTTCCAAATGGACGTCCAAATAACACAAGCAGAACAGACTGCTGGATGGGGGTTGCAAttgcctttaaaactctaa-tcacaatctgtcgtcatcttactcatttacgtacttgtctcttagatggacctgaccttggtctgtgtctcttcctgcgcactgtgagcccatgaggaaagggacttggtatgcttgtcagtgccatttctccagtgcctctaatggaggctggcccatacagagcag-gtacttaaaaaatctctgc-gagtgagtgagtgag----tgagt----gagtgagtgagtaggggaatgaatgaatGGAT--------------------AACACATGCATGCCT--GCCCCAGATGGACTGCTTGGGAACAGGGTCCT---CCCTTCCTA-GTGCCTTGGCACATGGTGCCTGCCC s panTro4.chr10 76448852 1096 + 133524379 CTG---------TCTCATCT---GGCATTACCAGGGA-----GTGC------------CTGAGGCTTCCCAGGCAGCA-ACACAGACCCCCTCACCAGCATCCTGCCAGTTAGAGAAC-TTAGCAGACAGGAGGCACAAATGCAAACATGCTGAATGAACACACAAGCTGAATGC---------ACAAGCTTCAGGCAACTCTGGCCCAAACAAGAGGCAAAATGTCCCAT---GTTCACGG--CCAGAGATTCTAGGCTTTCCCTTCGAA-GAGAACCCCTTGA--TTCCATCACATTGCTAGAC-------------------------------CCAAGA--------------------------------------------T-GGTTCCTGTGAAGAGTCTTGC-C---TTGCCTCTTAACCCCTATAATATTCCTGAGAGCACCCAAGCTCCAGAGAGTCTGGGTTTTTATAGAATAAATGGAGATCTTTGTCTCAT-TAGGAGTTTTACTGA--ATGGGAAAGAAGAGAAGC---TGTCACTCCCTTCTGATGGGCATCACTTGAG---TGTGCAAGGCTTGCACA-CTTGCACTCACACACGAGCTTCTCACTGCCCCCTCACCACACTAACAGCTAGGAAAATGTCGCACAATGGATGGAGAGCCACTGCTTTCCTACTAGATTTGGGTTTTAGAC-CAC-----GGCCTATT---GGGCTCTGCCAATTTCTATGCTTAAACCCTGATCTTTGTA-TTTCAATG-CACTACTAAAGGCCACTGAGTGT--TTAAATGACACCCTGGGAGGC--TGCTGTAATTGAGGGGAGGATGTCTGACACCCTAAATGG--TCTTCCAAATGGGCGTCCAAATAACACAGGCAGAACAGACTGCTGGATGGGGGTTGCAATTGCCTTTAAAACTCTAAATCACAATCTGTCGTCATCTTACTCATTTACGTACTTGTCTCTTAGATGGACCTGACCTTGGTCTGtgtctcttcctgcgcactgtgagcccatgaggaaagggacttggtatgcttgtcagtgccatttctccagtgcctctaatggaggctggcccatacagagcag-gtacttgaaaaatctctgc-gagtgagtgagtGAG----TGAGC----------------AGGGGAATGAATGAATGGAT--------------------AACACATGCATGCCT--GCCCCAGATGGACTGCTTGGGAACAGGGTCCT---CCCTTCCTA-GTGCCTTGGCACATGGTGCCTGCCC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76111765 1083 - 133410057 CCG---------TCTCATCT---GGCATTACCAGGGA-----GTGC------------CTGAGGCTTCCCAGGCAGCA-ACACAGACCCCCTCATCAGCATCCTGCCAGTTAGAGAAC-TTAGCAGACAGGAGGCACAAATGCAAACATGCTGAATGAACACAGAAGCTGAATGC---------ACAAGCTTCAGGCAACTCTGGCCCAAACAAGAGGCAAAATGTCCCAT---GTTCACAG-CCCAGAGGTTCTAGGCTTTCCCTTCAAA-GAGAATCCCTTGA--TTCCGTCACATTGCTAGAC-------------------------------CCAAGA--------------------------------------------T-GGTTCCTGTGAAGAGTCCTGC-C---TTGCCTCTTAACCCCTAAAATATTCCTGAGAGCACCCAAGCTCCAAAGAGTCTGGGTTTTTATAGAATAAATGGAGCTCTTT---------------------------------GAAGAGAAGC---TGTCATTCCCTTCTGAAGGGCATCACTTGAG---TGTGCAAGGCTTGCACA-CTTACACTCACACATGAGCTTCTCACTGCCCCCTCACCACACTAACAGCTAGGGAAATGTCGCACAATGGATGGAGAGCCACTGCTTTCCAACTAGATTTGGGTTTTAGAC-CAC-----GGCCTATT---GGGCTCTGCCAATTTCTATGCTTAAACCCTGATCTTTGTA-TTTCAATG-CACTACTAAAGGCCACTGAGTGT--TTAAATGACACCCTGGGAGGC--TGCTGTAACCGAGGGGAGGATGTCTGATATCCCAAACGG--TCTTCCAAATGGGCGTCCAAATAACACAGGCAGAACAGACTGCTGGATGGGGGTTGCAACTGCCTTTAAAACTCTAAATCACAATCTGTCGTCATCTTACTCATTTACGTACTTGTCTCTTAGATGGACCTGACCTTGGTCTGtgtctcttcctgcgcactgtgagcccatgaggaaaaggacttggtatgcttgtcagtgccatttctccagtgcctctaatggaggctggcccatacagagcag-gtacttgaaaaatctctgC-gagtgagtgagtgag----tgagtgagtgagtgagtgagtagtggaatgaatgaatgGAT--------------------AACACATGCATGCCT--GCCCCAAATGGACTGCTTGGGAACAGGGCCCT---CCCTTCCTA-GTGCCTTGGCACATGGTGCCTGCCC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35053315 1096 + 104879549 CTG---------TCTCATCT---GGCATTACCAGGGA-----GTGC------------CTGAGGCTTCCCAGGCAGCA-ACACAGACCCCCTCACCAGCATCCTGCCAGTTAGAGAAC-TTAGCAGACAGGAGGCACAGATGCAAACATGCTGAATGAACACACAAGCTGAATGC---------ACAAGCTTCAGGCAACTCTGGCCCAAACGAGAGGCAACATGTCCCAT---GTTCACAG-CTCAGAGGTTCTAGGCTTTCCCTTCGAA-GATAACCCCTTGA--TTCCATCACATTGCTAGAC-------------------------------CCAAGA--------------------------------------------T-GGCTCCTGTGAAGAGTCTTGC-C---TTGCCTCTTAACCCCTAAAATATTCCTGAGAGCACCCAAGCTCCAGAGAGTCTGGGTTTTTATAGAATAAATAGAGCTCTTTGTCTCAT-TAGGAGTTTTACTGA--ATGGGAAAGAAGAGAAGCTGTTGTCACTCCCTTCTGAAGTGCATCACTTGAG---TGTGCAAGGCTTGCACA-CTTGTACTCACACACGAGCTTCTCACTGCCCCCTCACCACACTAACAGCTAGGGAAATGTCACACAATGGGCGGAGAGCCACTGCTTTCCAACTAGATTTGGGTTTTAGAC-CAC-----GGCCTGTT---GGGCTCTGCCAGTTTCTATGCTTAAACCCTGATCTTTGTA-TTTCAATG-CACTACTAAAGGCCACTGAGTGT--TTAAATGACACCTTGGGAGGC--TGCTGTAACCGAGGGGAGGATGTCTGACACCCCAAACAG--TCTTCCAAATGGGCGTCCAAATAACACAGGCAGA----ACTGCTGGATGGGGGTTGCAATTGCCTTTAAAACTCTAAATCACAATCTGTCGTCATTTTACTCATTTACGTACTTGTCTCTTAGATGGACCTGACCTTGGTCTGtgtctcttcctgtgcactgtgagcccatgaggaaagggacttggtatgcttgtcagtgccatttctccagtgcctctaatggaggctggcccatacagagcag-gtacttgaaaaatctcagt-gagtgagtgagtGAG----TGAGT----------------AAGGGAATGAATGAATGGAT--------------------AACACATGTATGCCT--GCCCCAAATGGACTGCTTGGGAACATGGCCCT---CCCTTCCTA-GTGCCTTGGCACATGGTGGCTGCCC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73846469 1079 - 130959383 CTG---------TCTCATCT---AGAATTACCAGGGA-----GTGC------------CTGAGGCTTCCCAGGCAGCA-ACACAGACCCCCTCACCCGCATCCTGCCAGTTAGAGAAC-TTAGCAGACAGGAGGCACAAACGCAAACATACTGAATGAACACACAAGCTGAATGC---------ACAAGCTTCAGGCAACTCTGGCCCAAACAAGAGGCAAAACATCCCAT---GTTCACGC-CCCAGAGGTTCTAGGCTTTCCCTTCAAA-GAGAACTCCTTGA--TTCCATCACATTGCTAGAC-------------------------------CCAAGA--------------------------------------------T-GGTCCCTGTGAAGAGTCCTGC-C---TTGCCTCTTAACTCCTAAAATATTCCTGAGAGCACCCAAGCTCCAGAGAGTCTGGATTTTTACAGAATAAACGGAGCTCTTTGTCTCAT-TAGGAGTTTTACTGA--ATGGAAAAGAAGAGAAGC---TGTCACTCCCTTCTGAAGGGCATCACTTGAG---TGTGCAAGGCTTGCACA-CTTGCACGCACACACGAGCTTCTCACTGCCCCCTCACCACACTAACAGCTAGGGAAATGTCACATAATGGATGGAGAGCCACTGCTTTCCAACTAGATTTGGGTTTTAGAC-CAT-----GGCCTATT---GGGCTCTGCCAATTTCTATGCTTAAACCCTGATCTTTGTA-TTTCAATG-CACTACTAAAGGCCACTGAGTGT--TTAAATGACACCCTGGGGGGC--TGCTGTAACCAAGGGGAGGATGTCTGACACCCCAAACAG--TCTTCCAAATGGGCATCCAAATAACACAGGCAGAACAGACTGCTGGATGGGGGTTGCAATTGCCTTTAAAACTCTAAatcacaatctgtcatcattttactcattgatttacttgtctcttagatggacccaaccttggtctg----------tgtgcactgtgagcccatgaggaaagggtcttgatatgcttgtcagtgccatttctccagtgcctctaatggaggctggcccatacagagcag-gtacttgaaaaatctcagc-gagtgagtgagt----------------------------AGGGGAATGAATGAATGGGT--------------------AACACATGCATGCCT--GCCCCGAATGGACTGCTTGGGAACAGGGCCCT---CCCTTCCTA-GTGCCTTGGCACACAGTGCCTGCCC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75407791 1079 - 133195287 CTG---------TCTCATCT---AGAATTACCAGGGA-----GTGC------------CTGAGGCTTCCCAGGCAGCA-ACACAGACCCCCTCACCCGCATCCTGCCAGTTAGAGAAC-TTAGCAGACAGGAGGCACAAACGCAAACATACTGAATGAACACACAAGCTGAATGC---------ACAAGCTTCAGGCAACTCTGGCCCAAACAAGAGGCAAAACATCCCAT---GTTCACGC-CCCAGAGGTTCTAGGCTTTCCCTTCAAA-GAGAACTCCTTGA--TTCCATCACATTGCTAGAC-------------------------------CCAAGA--------------------------------------------T-GGTCCCTGTGAAGAGTCCTGC-C---TTGCCTCTTAACTCCTAAAATATTCCTGAGAGCACCCAAGCTCCAGAGAGTCTGGATTTTTACAGAATAAACGGAGCTCTTTGTCTCAT-TAGGAGTTTTACTGA--ATGGAAAAGAAGAGAAGC---TGTCACTCCCTTCTGAAGGGCATCACTTGAG---TGTGCAAGGCTTGCACA-CTTGCACGCACACACGAGCTTCTCACTGCCCCCTCACCACACTAACAGCTAGGGAAATGTCACATAATGGATGGAGAGCCACTGCTTTCCAACTAGATTTGGGTTTTAGAC-CAT-----GGCCTATT---GGGCTCTGCCAATTTCTATGCTTAAACCCTGATCTTTGTA-TTTCAATG-CACTACTAAAGGCCACTGAGTGT--TTAAATGACACCCTGGGAGGC--TGCTGTAACCAAGGGGAGGATGTCTGACACCCCAAACAG--TCTTCCAAATGGGCATCCAAATAACACAGGCAGAACAGACTGCTGGATGGGGGCTGCAATTGCCTTTAAAACTCTAAatcacaatctgtcatcattttactcattgatttacttgtctcttagatggacccaaccttggtctg----------tgtgcactgtgagcccatgaggaaagggtcttgatatgcttgtcagtgccatttctccagtgcctctaatggaggctggcccatacagagcag-gtacttgaaaaatctcagc-gagtgagtgagt----------------------------AGGGGAATGAATGAATGGGT--------------------AACACATGCATGCCT--GCCCCGAATGGACTGCTTGGGAACAGGGCCCT---CCCTTCCTA-GTGCCTTGGCACACAGTGCCTGCCC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73272314 1079 - 125196307 CTG---------TCTCATCT---AGAATTACCAGGGA-----GTGC------------CTGAGGCTTCCCAGGCAGCA-ACACAGACCCCGTCACCCGCATCCTGCCAGTTAGAGAAC-TTAGCAGACAGGAGGCACAAACGCAAACATGCTGAATGAACACACAAgctgaatgc---------acaagcttcaggcAACTCTGGCCCAAACAAGAGGcaaaacatcccat---gttcacgC-CCCAGAGGTTCTAGGCTTTCCCTTCAAA-GAGAACTCCTTGA--TTCCATCACATTGCTAGAC-------------------------------CCAAGA--------------------------------------------T-GGTCCCTGTGAAGAGTCCTGC-C---TTGCCTCTTAACTCCTAAAATATTCCTGAGAGCACCCAAGCTCCAGAGAGTCTGGATTTTTACAGAATAAATGGAGCTCTTTGTCTCAT-TAGGAGTTTTACTga--atggaaaagaagagaagc---TGTCACTCCCTTCTGAAGGGCATCACTTGAG---TGTGCAAGGCTTGCACA-CTTGCACGCACACACGAGCTTCTCACTGCCCCCTCACCACACTAACAGCTAGGGAAATGTCACATAATGGATGGAGAGCCACTGCTTTCCAACTAGATTTGGGTTTTAGAC-CAT-----GGCCTATT---GGGCTCTGCCAATTTCTATGCTTAAACCCTGATCTTTGTA-TTTCAATG-CACTACTAAAGGCCACTGAGTGT--TTAAATGACACCCTGGGAGGC--TGCTGTAACCAAGGGGAGGATGTCTGACACCCCAAACAG--TCTTCCAAATGGGCATCCAAATAACACAGGCAGAACAGACTGCTGGATGGGGGTTGCAATTGCCTTTAAAACTCTAAATCACAATCTGTCATCATTTTACCCATTGATTTACTTGTCTCTTAGATGGACCCAACCTTGGTCTG----------TGTGCACTGTGAGCCCATGAGGAAAGGGACTTGATATGCTTGTCAGTGCCATTTCTCCAGTGCCTCTAATGGAGGCTGGCCCATACAGAGCAG-GTACTTGAAAAATCTCAGC-GAGTGAGTGAGT----------------------------aggggaatgaatgaatgggt--------------------aacACATGCATGCCT--GCCCCGAATGGACTGCTTGGGAACAAGGCCCT---CCCTTCCTA-GTGCCTTGGCACACAGTGCCTGCCC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72104635 1088 - 125710982 CTG---------TCTCATCT---GGAATTACCAGGGA-----GTGC------------CTGAGGCTTCCCAGGCAGCA-ACACAGACCCCCTCACCCGCATCCTGCCAGTTAGAGAAC-TTAGCAGACAGGAGGCACAAACGCAAACATGCTGAATGAACACAGAAGCTGAATGC---------ACAAGCTTCAGGCAACTCTGGCCCAAACAAGAGGCAAAACATCCCAT---GTTCACGC-CCCAGAGGTTCTAGGCTTTCCCTTCAAA-GAGAACTCCTTGA--TTCCATCACATTGCTAGAC-------------------------------CCAAGA--------------------------------------------T-GGTCCCTGTGAAGAGTCCTGC-C---TTGCCTCTTAACTCCTAAAATATTCCTGAGAGCACCCAAGCTCCAGAGAGTCTGGATTTTTACAGAATAAACGGAGCTCTTTGTCTCAT-TAGGAGTTTTACTGA--ATGGAAAAGAAGAGAAGC---TGTCACTCCCTTCTGAAGGGCATTGCTTGAG---TGTGCAAGGCTTGCACA-CTTGCACTCACACATGAGCTTCTCACTGCCCCCTCACCACACTAACAGATAGGGAAATGTCACATAATGGATGGAGAGCCACTGCTTTCCAACTAGATTTGGGTTTTAGAC-CGT-----GGCCTATT---GGGCTTTGCCAATTTCTATGCTTAAACCCTGATCTTTGTA-TTTCAATG-CACTACTAAAGGCCACTGAGTGT--TTAAATGACACCCTGGGAGGC--TGCTGTAACCAAGGGGAGGATATCTGACACCC----CAG--TCTTCCAAATGGGCATCCAAATAACACAGGCAGAACAGACTGCTGGATGGGGGTTGCAATTGCCTTTAAAACTCTAGATCACAATCTGTCGCCATTTTACTCATTGATGTACTTGTCTCTTAGATGGACCTGACCTTGGTCTGtgtctcttcctgtgcactgtgagcccatgaggaaagggacttgatatgcttgtcagtgccatttctccagtgcctctaatggaggctggcccatacagagcag-gtacttgaaaaatctcagc-gagtgagtgaTT----------------------------AGGGGAATGAATGAATGGGT--------------------AACACATGCATGCCT--GCCCCGAATGGACTGCTTGGGAACAGGGCCCTCCCCCCTTCCTA-GTGCCTTGGCACACAGTGCCTGCCC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75563270 1086 - 121768101 CCC---------TCTCATCT---GGCATCACCAGAGA-----GTAC------------CTGAGGCTTCCTGGGCAGCA-ACACAGACTCCCTCACCAGCATCCTGCCAGTTAGAGAAC-TTAGCAAACAGGAGGCACAAATGGAAACATGCTAAATGAACACACAATCTGAACGC---------ACAAGCTTCAGGCAACTGTGGCCCAATCAAGAGGCAAAATGTCCCAT---GTTCACGA-CCCAGACGTTCTAGACTTTTCCTTCAAA-GAGAATTCCTTGA--TTCTATCACATTGCTAGAC-------------------------------CCAAGA--------------------------------------------C-GGTCCCTGCGAAGAGTCTTGC-C---TTGCCTCTTAGCCCCGAAAATATTCCTGAGAGCACCCAAGCTCCAGAGAGTCTGAGTTTTTATAGAATAAATGGAGGTCTTTGTCTTAT-TAGGAGATTTACTGA--ATGGGAAAGAAGGGAAGC---TGTCACTCCCTTCTGAAAGGCATTGCTTGAG---TGTGTAAGGCTTGCACA-CTTGCATTCACACACAAGTTCCTCACTGCCCCCTCACCACACTAACAGCGAGGGAAATGTCAAACAATGGACAGAGAGCCATGGCTTGCCAACTAGATTTGGGTTCTAGAC-CAT-----GGCCTGCT---GGGCTCTGCCAATTTCTTTGCTTAAACCCTGATCTTTGTA-TTTTAATG-CACTACTAGAGGCCCCTGAGTATTATTAAATGACACCCTGGGAAGC--TGCTGTAACTGAGGGGAGGATGTCTCATACCCCAAACAG--TCTTCTAAATGGGCATCCAAATAACACAGGCAAAACAGACTGCTGGATGAAGGTTGCAATTGCCTTTAAAACTCTAAATCACAATCTGTTGCCATTTTACTGATTTACATACTTGTCTCTTAGTTGGACCTGACCTTGGTCTGtgtcttttcctgtgcactgtgaggccatgaggtaagggacttggtatgcctgtcagtgccatttctccaatgtctctaatggaggctggcccatacagagcag-gtacttgaaaaatctcact-gagtgagcgagtGAGTGCATGAGT----------------AGGGGAATGAATTAGTAGCA--------------------AACACACACATGCCT--GCCCCAAATGGAGTACCTGGGAACAGGGCCCT---CCCTTCCTA-GTGCCTTG----------------- i calJac3.chr12 C 0 C 0 s mm10.chr14 24169211 994 + 124902244 ATGCTCAGGACATTCTGCCT---GTCACCA-CAGGGG-----CTAC------------CTATGCTTCTCCAGACTGAAGGTAGGGACATCCTTAGCAGCAGGTCACCAGTGAGAGAAC-TTAGCAGAGAGGAGCTGCAAACGCAAGCA----AAATGAATGCAGAGACGGAAGCC---------AGTGCTTTTTCTACGCTCTGCCTCTAGCAAAATGGAGACCCTCCTTT-TAAACCACAT-TCCAGAGCTTCCAGAGTTTCCCCTAAAATGGGTGTTTCTTTCTTTTCCATCTCAGTTCTTGATGAAGTGAGAGACTTGCATGTGCCATGCTCTACCAATAAACTATATTCCTGCCTGATAGGATTCCATACCCGACTCCATCCCT-TGTTCCTGGGCAAGGGCCTGC-CACGTTGCCTCTAAAGCCCTAGAATATCC-------------AGCTCCCTCTGGTGTAGGTTATTC---AGTAAATGAAGCTATTGATCTTGG-TAGA-----TATTGACGATTGGAAGGAAGGGAAGC---TGCCACCCCCTTCTGAAAGG------GTGAGGTTTCTGTGAGGTTTCGATGTCTTCTAAGCTTGCATGTG----TGAATGCCCCAGTATCTTA-TATCAGCTCTAGAGAAGCCACACGATGGGC--AGAGCTGCCGCCTCCCAGGTAGAGTCTGAGTCTAGAC-AATAAGTAGAGTCATT---TGGCACTGCCAATTTCAAC-TATAAACTCTAAACTTTATATTTTCTATC-CATAGCTAAGGGTCACCAAGTGT--CTAAATGGCCCCATTGGAGGG--TGCTATGATTGAAAGGAAGGTGACCCGTAATCCAAACAG--CCTTACAAATGGGCATCTACAGAGCATGAGTAGAACAGGCTACCAAGCCACGGTGACAACTCCCTGGAAAACC----------GTCTGTTAAC---TTCATCATTAA-GTGTATGTCTC--------------------TCTCTTTCTCTTCCCATGCACTCTGAGC---------------------------------ACCATGTCTACAG-------------------------CAGTACAGTGTGCTTG----GTTTCTGC-------------------------------------------------------------------------------------------TGCTT--GCTTC------------------------CCT---GCCTTCCCACGTGCCTTGGCATTAGGTGCTTGTCC i mm10.chr14 C 0 C 0 s canFam3.chr4 27723207 1084 + 88276631 CTG---------GCTCATCTCTCAGAACCCCCCGGGGCAGGTGTGCCGCCTCTGCAGACCGGGGCCTTCTGGGCAGTA-ACTCGG-CCTCCGCCCCAGCA-----CTGGCTAGAGAGCATTAACAAAGAGGAGGTGCAGATTCAGACGTGC----TGAACAAACTAATGGAATTCAACTTTCTTAGAAGTTCCAGGCAATTCCAGTTCCATTAAAATGTAAAACTTCCTTCGGAGCTCAAGCCCCCAGGGG--CCAGACTTTACCCT--AA---------TTTGG--TTCCATCAC-TTGCTAGAC-------------------------------CCAAGG--------------------------------------------TGGGTCCCTGGAGAGAGTGTGTCAC---TTGCCTCTTAGCCC--AAGATTTTCTTTAGAGCACTTGAGCCCGAGAGATTCCGTGTTTTTATCGAGTAACTGAAGCTGGGTGGCTCATGTTAGAGT--TACTGAT-GGGGGAGGGACGGGAGGC---TGTCACT-CTGGCTGAAAGGTGCTGCTCCGG---CTTGCAAGGCTCGCA---CCTGCACGC-------------CCTCTCCTCCCCACCCTCACCACCATC------------------TGCACTGAGAGCCACTGCTTCTCAGG-AGAGTCCGCTGCTACCTGCAG-----GGACAGCTTCGGGCTTCCGCCAATCTCTCTGGTT-AACTCTGATCTTTGTA-GTTTAAGGCCACTGCTTAGGGACACCACGT-C--TCAAGTCACAATCCTGGGTGCAGTGCCGTACTGAGGGGGAGG----CTGACACCCCAGGCAGTCTCTTCCGAGCAGGCATCTGAAGCCCACAGGCAGAACAAACTGCCACGTGGTG------ACGGCTTTCCAAACACTGCGTCACCA--TGTCAGGGCTTTGTTCACAGA----GCTGTCGCT--GGAGGGCCTGCCTGTGgcctg--tctcctcctgtgtgctgggagccc-caccggcagagacctggtccacagtttagtggc--ttccccagcacctcccacag-gcccagcccatccagagcag-ccactcaatacatgcttgcagagttggtgaatgaatGAGGTAGA----------------GAGGggatggatggatggatggatggacggacggaCAGAGAGTACCCACTTGCCCTGTCTCCAAATGGATTGCCTATGAACAGAGACCT---TCCTTCCTGCGTGCCTTTGCACACGGTACCTGCCC i canFam3.chr4 I 230 I 39 a score=41674.000000 s hg38.chr10_KI270825v1_alt 72369 16 + 188315 TGTGTCTAAGAATTTT s panTro4.chr10 76449948 16 + 133524379 TGTGTCTAAGAATTTT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76112848 16 - 133410057 TGTGTCTAAGAATTTT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35054411 16 + 104879549 TGTGTCTAAGAATTTT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73847548 16 - 130959383 TGTGTCTAAGAATTTC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75408870 16 - 133195287 TGTGTCTAAGAATTTC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73273393 16 - 125196307 TGTGTCTAAGAATTTC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72105723 16 - 125710982 TGTGTCTAAGAATTTC i chlSab2.chr9 C 0 C 0 s mm10.chr14 24170205 16 + 124902244 CATCTCCATGAGCTTA i mm10.chr14 C 0 C 0 e canFam3.chr4 27724291 39 + 88276631 I e calJac3.chr12 75564356 0 - 121768101 C a score=1831629.000000 s hg38.chr10_KI270825v1_alt 72385 517 + 188315 TGGCCTAAGAATTTCTAATTAA--CCCTACATGGAGATGACATTCGAACCCATTCTACACACTGACAGAGTAAGGCAGAGTGAAGTGAAGGGACAAACAGCCAGCTCGACGCAGAAGGATGAGGCCCTGGCCAATGCACTCAGCATTGCCTTGCCCAGAAGGGAGAGGGGC--C-CCAGGC---------TCCCAGATGC---ATGCCCAC-TCCAGCGGGTGC-------CCACCCGAGCCTACTTGAGCTCCTTCAGCTCGCGGCTGACATCATTCTTCTGCTTGCGGGTGTCATCCAGGCTGCGCAGGGCCTCAGCCAGCTCGCTCACCGCACGGTCCCGCTCCCGCCTCAGGTTGTCACACAGTGTCCTGGTGGAAGGAGCAGAGGACAAGGTCATCTCAAGAGGCATG---GGGAAGGGGGTTCCTGGTCTGCAGCGGATGG----TCTGGCCACCTCACTCCAAATACCTGCCGGCACCTATCCCATCCCCAGATGCAC---AGGAACACTTGGGAATCTAGGGGTAAGACCACCTAGGCCAGCCC s panTro4.chr10 76449964 517 + 133524379 TGGCCTAAGAATTTCTAATTAA--CCCTACATGGAGATGACATTCGAACCCATTCTACACACTGACAGAGTAAGGCAGAGTGAAGTGAAGGGACAAACAGCCAGGTCGACACAGAAGGATGAGGCCCTGGCCAATGCACTCAGCATTGCCTTGCCCAGAAGGGAGAGGGGC--C-CCAGGC---------TCCCAGATGC---ATGCCCAC-TCCAGCGGGTGC-------CCGCCCGAGCCTACTTGAGCTCCTTCAGCTCGCGGCTGACATCATTCTTCTGCTTGCGGGTGTCATCCAGGCTGCGCAGGGCCTCAGCCAGCTCACTCACCGCACGGTCCCGCTCCCGCCTCAGGTTGTCACACAGTGTCCTGGTGGAAGGAGCAGAGGACAAGGTCATCTCAAGGGGCATG---GGGAAGGGGGCTCCTGGTCTGCAGCGGATGG----TCTGGCCACCTCACTCCAAATACCTGCCGGCACCTATCCCATCCCCAGATGCAC---AGGAGCACTTGGGAATCTAGGGGTAAGACCACCTAGGCCAGCCC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76112864 517 - 133410057 TGGCCTAAGAATTTCTAATTAA--CCCTACATGGAGATGACATTCGAACCGATTCTACACACTGAAAGAGTAAGGCAGAGTGAAGTGAAGCGACAAACAGCCAGGTCGACATAGAAGGATGAGGCAGTGGCCAATGCACTCAGCATTGCCTTGCCCGGAAGGGAGAGGGGC--C-CCAGGC---------TCCCAGATGC---ATGCCCAC-TCCAGCGGGTGC-------CTGCCCGAGCCTACTTGAGCTCCTTCAGCTCGCGGCTGACATCATTCTTCTGCTTGCGGGTGTCATCCAGGCTGCGCAGGGCCTCGGCCAGCTCGCTCACCGCACGGTCCCGCTCCCGCCTCAGGTTGTCACACAGTGTCCTGGTGGAAGGAGCAGAGGACAAGGTCACCTCAAGGGGCATG---GGGAAGGGGGCTCCTGGTCTGCAGCGGATGG----CCTGGCCGCCTCACTCCAAATACCTGCTGGCACCTATCCCATCCCCAGATGCAC---AGGAGCACTTGGGAATCTAGGGGTAAGACCACCTAGGCCAGCCC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35054427 517 + 104879549 TGGCCTAAGAATTTCTAATTAA--CCCAACATGGAGATGACATTCGAACCCATTCTACACACTGACAGAGTAAGGCAGAGTGAGGTGAAGGGACAAACAGCCAGGTCAACATAGAAGGATGAGGCCCTGGCCAATGCACTCAGCATTGCCTTGCCCGGAAGGGAGAGGGGT--C-CCGGGC---------TCCCAGATGC---ATGCCCAC-TCCAGCGGGTGC-------CCGCCCGAGCCTACTTGAGCTCCTTCAGCTCGCGGCTGACATCATTCTTCTGCTTGCGGGTGTCATCCAGGCTGCGCAGGGCCTCGGCCAGCTCGCTCACCGCACGGTCCCGCTCCCGCCTCAGGTTGTCACACAGTGTCCTGGTGGAAGGAGCAGAGGACAAGGTCACCTCAAGAGGCACA---GGGAAGGGGGTTCCTGGTCTGCAGCGGATGG----CCTGGTCACCTCACTCCAAATACCTGCCGGCACCTGTCCCATCCCCAGATGCAC---AGGAGCGCTTGGGAATCTAGGGGTAAGACCACCTAGGCCAGCTC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73847564 501 - 130959383 TGGCCTAAGAATTTCTAATTAA--CCCAACATGGAGATAACATTCAAACCCATTCTACAGACTGACAGAGCAAGACAGAGTGAAGTGAAGGGACAAACAGCCAGCTCGACACAGAAGGATGAGGCCCTGGCCAATGCACTCAGCACTGCCTTGCCCAGAAGGGAGAGGGGC--C-CCGGGC---------TCCCAGATGT--------------------GAGC-------CCATCCCAGCCTACTTGAGCTCCTTCAGCTCACGGCTGACGTCATTCTTCTGCTTGCGGGTGTCATCCAGGCTGCGCAGGGCCTCGGCCAGCTCACTCACCGCACGGTCCCGCTCCCGCCTCAGGTTGTCACACAGTGTCCTGGTGGAAGGAGCAGCAGACAAGGTCACCTGAAGGGGCACG---GGGAAGAGGGCTCCCGGTCTGCAGCAGATGG----CCTGGCTGCCTCACTCCAAATACCTGCCGGCACGTGCCCCATCCCCAGATGCAC---AGGAGCGCTTGCGAATCTGGGGGTAAGACCACCTAGGCCAGCCC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75408886 501 - 133195287 TGGCCTAAGAATTTCTAATTAA--CCCAACATGGAGATAACATTCAAACCCATTCTACAGACTGACAGAGCAAGACAGAGTGAAGTGAAGGGACAAACAGCCAGGTCGACACAGAAGGATGAGGCCCTGGCCAATGCACTCAGCATTGCCTTGCCCAGAAGGGAGAGGGGC--C-CCGGGC---------TCCCAGATGT--------------------GAGC-------CCATCCCAGCCTACTTGAGCTCCTTCAGCTCACGGCTGACGTCATTCTTCTGCTTGCGGGTGTCATCCAGGCTGCGCAGGGCCTCGGCCAGCTCACTCACCGCACGGTCCCGCTCCCGCCTCAGGTTGTCACACAGTGTCCTGGTGGAAGGAGCAGCAGACAAGGTCACCTGAAGGGGCACG---GGGAAGAGGGCTCCCGGTCTGCAGCAGATGG----CCTGGCTGCCTCACTCCAAATACCTGCCGGCACGTGCCCCATCCCCAGATGCAC---AGGAGCGCTTGCGAATCTGGGGGTAAGACCACCTAGGCCAGCCC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73273409 501 - 125196307 TGGCCTAAGAATTTCTAATTAA--CCCAGCATGGAGATAACATTCAAACCCATTCTACagactgacagagcaagacagagtgAAGTGAAGGGACAAACAGCCAGGTCGACACAGAAGGATGAGGCCCTGGCCAATGCACTCAGCATTGCCTTGCCCAGAAGGGACAGGGGC--C-CTGGGC---------TCCCAGATGT--------------------GAGC-------CCGTCCCAGCCTACTTGAGCTCCTTCAGCTCACGGCTGACGTCATTCTTCTGCTTGCGGGTGTCATCCAGGCTGCGCAGGGCCTCGGCCAGCTCACTCACCGCACGGTCCCGCTCCCGCCTCAGGTTGTCACACAGTGTCCTGGTGGAAGGAGCAGCAGACAAGGTTACCTGAAGGGGCACG---GGGAAGAGGGCTCCCGGTCTGCAGCGGATGG----CCTGGCTGCCTCACTCCAAATACCTGCCGGCACGTGCCCCATCCCCAGATGCAC---AGGAGCGCTTGCGAATCTGGGGGTAAGACCACCTAGGCCATCCC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72105739 488 - 125710982 TGGCCTAAAAATTTCTAATTAA--CCCAACATAGAGATAACATTCAAACCCATTCTACAGACTGACAGAGCAAGACAGAGTGAAGTGAAGGGACAAACAGCCAGGTCGACACAGAAGGATGAGGCCCTGGCCAATGCACTCAGCATTGCCTTGCCCAGAAG----------------GGGC---------TCCCAGATGT--------------------GAGC-------CTGTCCCAGCCTACTTGAGCTCCTTCAGCTCACGGCTGACGTCATTCTTCTGCTTGCGGGTGTCATCCAGGCTGCGCAGGGCCTCGGCCAGCTCACTCACCGCACGGTCCCGCTCCCGCCTCAGGTTGTCACACAGTGTCCTGGTGGAAGGAGCAGCAGACAAGGTCACCTGAAGGGGCACG---GGGAAAGGGGCTCCCAGTCTGCAGCGGATGG----CCTGGCTGCCTCACTGCAAATACCTGCCGGCATGTGCCCCATCCCCAGATGCAC---AGGAGCGCTTGGGAATCTGGGGGTAAGACCACCAAGGCCAGCCC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75564356 513 - 121768101 -TGTCTAAGAATTTCTAATTCA--TTCAACATGGAGATGACATTCGAACCTATTCTACAGACTGACAGAGTAAGGCAGAGTGAAGAAAAGGGACAGACGGCCAGCTCGACAC--AATGAGGAGGCCCAGGTCAATGCACTCAGCATTGCCTTGCCCTGAAGGGAGAGGGGC--C-CTGGGC---------TCCCAGATGC---ACGCCCAC-TCCAGCAGGTGC-------CCGCCCGAGCCTACTTGAGTTCCTTCAGCTCACGGCTGACATCATTCTTCTGCTTGCGGGTGTCATCCAGGCTGCGCAGGGCCTCGGCCAGCTCGCTCACTGCACGGTCCCGCTCCCGCCTCAGGTTGTCACACAGTGTCCTGGTGGAAAAACCAGAGAACAAGGTCACCTCAAGGGGCAGG---GGGAAGGGGGCTCCTGGTCTGCAGCGGATGG----CCTGGCTGTCCTACTCCAAACACCTGCCAACACCGGCCCCAACCCCAGATGCAT---AGGACCACTTGGGAGTCT-GGGGTAAGACCAACGAGGCCAGCCT i calJac3.chr12 C 0 C 0 s mm10.chr14 24170221 489 + 124902244 TCAACAGGCTGGTGCCATCT-----TCTATAGACTGCCAATATTCAAACCCACTCGGTAGCCTCTCATAGTGAAGCAAAATGAAGGGA-----------------------CACAATGACAAATCCCTATTCAGTGCACTCAAGGGCGTCCCACCCGAAAGGGAGAAGGACAGT-CTAGACAGAAGCCCTGCCCAGGCAGGTAATGCCCAG-CCCAGGCGGGTA-------CCACCCAAGCCTACTTGAGCTCCTTGAGCTCCCGGCTGACGTCATTCTTCTGCTTCCGAGTGTCATCCAGGCTGCGAAGGGCTTCAGCCAGCTCACTCACAGCTCGATCTCGCTCCCGCCTCAGGTTGTCACACAGGGTCCTGGGAGAGAAAGCAGAGGTCAAGGTCACTGTGAATGGTAAGCAAGGAGGAAGGGCCTGAGGTCTGTACCGTATCA----CCTGTCAGCCCC--------TACCTCCAAGTTTCAGTCTAAAGCAAACAAGCAC---AAAAG-------GAGTGCATGGCC----CCATCCAGACCAGCCC i mm10.chr14 C 0 I 43 s canFam3.chr4 27724330 491 + 88276631 CGGTCTAAGAATTTCTAATGAACTCTCAGCATGGATACAGCATTCACATCCATTCTACGGACGGATGGAGTGAAGCGGGGTGAAG-----GGACAGACAGCCAGGT----------------------------GGCACGCAGCA--GCCTTGCCCTGGCAGGAGAGGGCC--CACCACAC---------CCCCAGACGC---AAGCTCACGGTGGGCAGGTGCCCCCCCACCCCCCCGGCGTACTTGAGCTCCTTGAGCTCACGGCTGACATCATTCTTCTGCTTGCGAGTGTCGTCCAGGCTGCGCAGAGCTTCGGCCAGCTCGCTCACCGCCCGGTCCCGCTCCCGCCTCAGGTTGTCACAGAGCGTCCTGGTGGGGAAGACGGAGGCCAAGGTCACCGTGAGGGGAGAA---GGGCAGAGGACTCACGGCCTGCAGTGGACTGCGGCCCTGGC-------CCCCAAACACC--CTGGTGCCTGCCTGGCCTCCAAATGCACTGAAGGAGTGCTTGGGAGTCCAGAGGTGAGGCCATCCGGGCCAACCC i canFam3.chr4 I 39 C 0 a score=474855.000000 s hg38.chr10_KI270825v1_alt 72902 152 + 188315 CAGTGCATGACAGAGGGAATGTGGAGGACCTGGGCAGGGAA-GAGACA-CCCCCACAGTCACCCGGCAACAAGT-------GTCAGGTTCCCAATGCCCTGTTTCACCCTCAATGTGCCTGGGGTTAAGGACCACCCTCTGCACACACTCACTGTTCTAAT s panTro4.chr10 76450481 152 + 133524379 CAGTGCATGACAGAGGGAATGTGGAGGACCTGGGCAGGGAA-GAGACA-CCCCCACAGTCACCCAGCAACAACT-------GTCAGGTTCCCAATGCCCTGTTTCACCCTCAATGTGCCTGGGGTTAAGGACCACCCTCTGCACACACTCACTGTTCTAAT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76113381 152 - 133410057 CAGTGCATGACAGAGGGAACGTGGAGGACCTGGGCAGGGAA-GAGACA-CCTCCACAGTCTCCCAGCAACAAGT-------GTCAGGTTCCCAATGCCCCGTTTCACCCTCAATGTGCCTGGGGTTAAGGACCACCCTCTGCGCACACTCACTGTTCTAAT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35054944 152 + 104879549 CAGTGCACGACAGAGGGAACATGGAGGACCTAGGCAGGGAA-GAGACA-CCCCCACAGTCACCTGGCAACAAGT-------GTCAGGTTCCCAATGCCCTGTTTCACCCTCAATGTGCCTGGGGTTAAGGACCACCCTCTGCACACACTCACTCTTCTAAC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73848065 152 - 130959383 CAGTGCATGACAGAGGGAACGTGGAGGACCTGTGCAGGGAA-GATATA-CCCCCACAGTCACCCCGCAACAAGT-------GTCAGGTTCCCAATGCCCCGTTTCACCCTCAATGTGCCTGGGGTTAAGGACCACCCTCTGCACACACTCACTGTTCTAAG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75409387 152 - 133195287 CAGTGCATGACAGAGGGAACGTGGAGGACCTGTGCAGGGAA-GATATA-CCCCCACAGTCACCCCGCAACAAGT-------GTCAGGTTCCCAATGCCCCGTTTCACCTTCAATGTGCCTGGGGTTAAGGACCACCCTCTGCACACACTCACTGTTCTAAG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73273910 152 - 125196307 CAGTGCATGACAGAGGGAACGTGGAGGACCTGTGCAGGGAA-GATATA-CCCCCACAGTCACCCCGCAACAAGT-------GTCAGGTTCCCAATGCCCCGTTTCACCCTCAATGTGCCTGGGGTTAAGGACCACCCTCTGCACACACTCACTGTTCTAAG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72106227 152 - 125710982 CAGTGCACGACAGAGGGAACGTGGAGGACCTGTGCAGGGAA-GATATA-CCCCCAGAGTCACCCCGCAACAACT-------GTCAGGTTCCCAATGCCCCGTTTCACCCTCAATGTGCCTGGGGTTAAGGACCACCCTCTGCACACACTCACTGTTCTAAG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75564869 153 - 121768101 CAGTGCATGACAGAGGGAATGTGGAGGACCTGGGCAGGGAA-GAGACAGCCCCCATAGTCACTTGTCAACAAGT-------GTCAGGTTCCCAATGCTCCGTTTCACCCTCAAGGTGCCTGGAGTTAAGGACTACTCTCTGCACACTCTTACTGTTCTAAC i calJac3.chr12 C 0 C 0 s canFam3.chr4 27724821 114 + 88276631 CATCGAGGGTCAAAGAAGACACCAAGGGC-----CAGGAAACAAGACA-TCTCCACAGTTACTGGGCAACGGGTTCTGAACGTCCAGTGCTCACCCCACAGCTTCGCCCTCAGTGTGCCT----------------------------------------- i canFam3.chr4 C 0 C 0 e mm10.chr14 24170710 43 + 124902244 I a score=1133753.000000 s hg38.chr10_KI270825v1_alt 73054 374 + 188315 GCCAACTTGGGGAGCCAGGGGGTGGCTCTCCTCTGCATGAAGCACCCCCCACCTGCCTGGCAGGCC----TGTGCTCCAGCACTACCACATGTCTCATATCTACCCACAGGCAGAGCTTTCTAGAGCTGTCCCTGTACCCTGCAACTAGGAAGGGAGCCCCT--TCGGATACCAGCCAGTCCTCATGCATCTCTGTCTCTATTAGCTCTGTGCAGGTGCAAAGTACAAGCTTGGCAAGACTCTATGAAAGAGGACC--------------CCAAGGAGGTGG------AAACAGATTACCTGGCTGTGGAGG-------GGCCT--------GGGCTCTG-------------T-----GCCACCTCCAGAA-------------ATGGACATACCCAGAGGAC--TGGTTCCTACCTCTCCACAGCCTCGAATCTCCCCCAGCCTCA s panTro4.chr10 76450633 374 + 133524379 GCCAACTTGGGGAGCCAGGGGGTGGCTCTCCTCTGCATGAAGCACCCCCCACCTGCCTGGCAGGCC----TGTGCTCCAGCACTACCACATGTCTCATATCTACCCACAGGCAGAGCTTTCTAGAGCTGTCCCTGTACCCTGCAACTAGGAAGGGAGCCCCT--TCGGATACCAACCAGTCCTCATGCATCTCTGTCTCTCTTAGCTCTGTGCAGGTGCAAAGTACAAGCTTGGCAAGACTCTATGAAAGAGGACC--------------CCAAGGAGGTGG------AAACAGATTACCTGGCTGTGGAGG-------GGCCT--------GGGATCTG-------------T-----GCCACCTCCAGAA-------------ATGGATATACCCAGAGGAC--TGGTTCCTACCTCTCCACAGCCTCGAATCTCCCCCAGCCTCA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76113533 374 - 133410057 GCCAACTTGGGGGGCCAGGGGATGGCTCTCCTCTGCATGAAGCACCCCCCACCTGCCTGGCAGGCC----TGTGCTCCAGCACTACCACATGTCTCATATCTACCCACAGGCAGAGCTTTCTAGAGCTGTCCCTGTACCCTGCAACTAGGATGGGAGCCCCT--TCGGATACCAGCCAGTCCTCATGCATCTCTGTCTCTCTTAGCTCTGTGCAGGTGCAAAGTACGAGCTTGGCAAGACTCCATGAAAGAGGACC--------------CCAAGGAGGTGG------AAACAGATTACCTGGCTGTGGAGA-------GGCCT--------GGGCTCTG-------------T-----GCCACCTCCAGAA-------------ATGGATATACCCAGAGGAC--TGGTTCCTACCTCTCCACGGCCTCAAATCTCCCCCAACCTCA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35055096 373 + 104879549 GCCAACATGGGG-GCTGGGGGGTGGCTCTCCTCTGCATGAAGCATCCCCCATCTGCCTTGCAGGCC----TGTGCTCCAGCACTACCACATGTCTCATATCTACCCACACGCAGGGCTTTCTAGAGCTATCCCTGTACCCTACAACTAGGATGTGAGCCCCT--TCGGATAGCAGCCAGTCCTCATGCATCTCTGTCTGTCTTAGCTCTGTGCGGGTGCAAAGTACAAGCTTGGCAAGACTCTATGAAAGAGGACC--------------CCAAGGAGGCGG------AAACAGATGACCTGCCTGTGGAGG-------GGCCT--------GGGCTCTG-------------T-----GCCACCTCCAGAA-------------ATGCATATACCCAGAGGAC--TGGTTCCTACCTCTCCATGGCCTCAAATCTCCCCCAACCTCA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73848217 374 - 130959383 GTCAACTTGAGGGCCC-GGGGGTGGCTCTCCTCTATATGAAGCA-CCCCCACCTGCTTGGCAGGCC----TGTGCTCCAGCACTACCCCATGTCTCACATCTCCCCACAGGCAGAGCTTTCTAGAGCTATCCCTGTACCCTGCAACTGGGATGGGAGCCCCT--TCAGATAGCAGCCGGTCCTCATGTATCTCTGTCTCTCTTAGCTCTGTGAGGGTGCAAAGTACAAGCTTGGCGAGACTCTACGAAAGAGGACC--------------CTAAGGAAGTGG------AGACAGATGACCTGGCTGTGGAGG-------GGCCT--------GGGCTCTG-------------T-----GCCACCTCCATAA-------------ATGGATATACCCAGAGGACTGTGGTTCCTACCTCTCCACAGCCTCACATCTCCCCCAACCTCA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75409539 374 - 133195287 GTCAACTTGAGGGCCC-AGGGGTGGCTCTCCTCTATATGAAGCA-CCCCCACCTGCTTGGCAGGCC----TGTGCTCCAGCACTACCCCATGTCTCACATCTACCCACAGGCAGAGCTTTCTAGAGCTATCCCTGTACCCTGCAACTGGGATGGGAGCCCCT--TCAGATAGCAGCCGGTCCTCATGTATCTCTGTCTCTCTTAGCTCTGTGAGGGTGCAAAGTACAAGCTTGGCGAGACTCTACGAAAGAGGACC--------------CTAAGGAAGTGG------AGACAGATGACCTGGCTGTGGAGG-------GGCCT--------GGGCTCTG-------------T-----GCCACCTCCATAA-------------ATGGATATACCCAGAGGACTGTGATTCCTACCTCTCCACAGCCTCACATCTCCCCCAACCTCA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73274062 373 - 125196307 GTCAACTTGAGGGGCC--GGGGTGGCTCTCCTCTCTATGAAGCA-CCCCCACCTGCTTGGCAGGCC----TGTGCTCCAGCACTACCCCATGTCTCATATCTACCCACAGGCAGAGCTTTCTAGAGCTATCCCTGTACCCTGCAACTGGGATGGGAGCCCCT--TTGGATAGCAGCCGGTCCTcatgtatctctgtctctcttagCTCTGTGCAGGTGCAAAGTACAAGCTTGGTGAGACTCTACGAAAGAGGACC--------------CTAAGGAGGTGG------AGACAGATGACCTGGTTGTGGAGG-------GGCCT--------GGGCTCTG-------------T-----GCCACCTCCATAA-------------ATGGATATACCCAGAGGACTGTGGTTCCTACCTCTCCACAGCCTCAAATCTCCCCCAACCTCA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72106379 374 - 125710982 GTCAACTTGAGGGGCC-GGGGGTGGCTCTCCTCTATATGAAGCA-CCCCCACCTGCTTGGCAGGCC----TGTGCTCCAGCACTACTCCATGTCTCATATCTACCCACAGGCAGAGCTTTCTAGAGCTATCCCTGTACCCTGCAACTGGGATGGGAGCCCCT--TCGGATAGCTGCCGGTCCCCATGTATCTCTGTCTCTCTTAGCTCTGTGCAGGTGCAAAGTACAAGCTTGGCGAGACTCTACGAAAGAGGACC--------------CTAAGGAGGTGG------AGACAGATGACCTGGCTGTGGAGG-------GGCCT--------GGGCTCTG-------------T-----GCCACCTCCATAA-------------ACGGATATAACCAGAGGACTGTGGTTCCTACCTCTCCACAGCCTCAAATCTCCCCCAGCCTCA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75565022 353 - 121768101 GCCAGCTCTGGGGGTCGGGGGGTGACTCTCCTCTGCATGAAGCTCCCCCTGCCTGCCT-GCAGGGC----TGTGCTCCAGCACTATCACATGTCTC--ATCTACCCACAGGCAGGGCTTTCTAGAG----------------CAACTAGAACGGGAGCCCCT--TCAGAGAGCAGCCAGTCCTCATGCATCTCTGTC--TCTGAGCTCTGTGCAGGTGCAAAGTACAAGCTTGGCGAGACTCTATGAAAGAGGACC--------------CCAAGGAAGTGG------GGACAGGTGACCTAGCTGTGAAGA-------GGCCT--------GGACTCTGAAAAGGCTCTATCC-----TTTTCCTCCAGAA-------------AAGGATATA---------------TTCCCACCTCTCCACAACCCCAAATCTCCCCCAACCTTA i calJac3.chr12 C 0 C 0 s mm10.chr14 24170753 323 + 124902244 --------------------------------------------------GCCCACTTGGTGAGCTTCAGTGCGCCACAGCCATA------GTTCCTTAGCTGACCATACACAGGGCCTTCTA--------CCTATGCC--ACGACGAGGCTGAGGAACACT--T--------AGCCAGGACTCAG--CTCGCTGTCTCTCT-GGCTCTGTTCCAGTGCAACG-GTGAACCTGATGGGGTACCAGGGGGAAGGAGT--------------GCGGGAAGGGGGTACTCAAGCCATTTCATCTACCTAGGCAGGAAACACAAGCCTACACCAGGAGGGCCTG-------------TGCATGGCCATCTCTAAAA---------------TAATGTGCCCTACAGC---TGGTTCTCCTGCCTCTACAGCCTAAAACCTTTACTGCCCTGA i mm10.chr14 I 43 C 0 s canFam3.chr4 27724935 371 + 88276631 ---------------CGGTGAATGCCTCACCCC---------CAGCCCCAGCCCGCCTGGCAGGCC----TCTGTATC----CTATCACATGCTTCCTATCTACCCACATGCAG-GCCTTTTAGAGCTGTCCCTG-ACCCCACAACTAGACTGAGCCCCCCTACTTGTATAGAAACTATGCCTCATGCATCTCTGCAGCCCTGAGCTCTGGGCAGGTGCAAAGTGCGGGCCTGACAACTCCCCACCGA--AGGACCACGTCAGTCATTCACAGAGAAAGTAG------GGACAGCTGACCTGGCAGCAGGGG-------AGCGT--------GTGCCCTG-------------G-----GCCACCTCCAGAACTGTACCCTACCACTGGACGGCCCCTAAGGAC--TGGTCCCCATGTCTGCATGGCCCCCAATACCCTCCACCCTGA i canFam3.chr4 C 0 C 0 a score=435595.000000 s hg38.chr10_KI270825v1_alt 73428 146 + 188315 GTCAGAGCCTGGCTGAGGACTGCCCCCTGGAGACACCCGTGGAAGGGGTCTGAGCAGAAGCAGACAGGAAGCAGCCCCTGGGCCT------CCCTCCCCTTGCACTGGGCACCTAACTGTGCTCTCCATTAGCAGGGCCTCACCACCTA-----GCC s panTro4.chr10 76451007 146 + 133524379 GTCAGAGCCCGGCTGAGGACTGCCCCCTGGAGACACCCGTGGAAGGGGTCTGAGCAGAAGCAGACAGGAAGCAGCCCCTGGGCCT------CCCTCCCCTTGCACTGGGCACCTAACTGTGCTCTCCATTAGCAGGGCCTCACCACCTA-----GCC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76113907 146 - 133410057 GTCAGAGCCCAGCTGAAGACTGCCCCCTGGAGACAACTGTGGAAGGGGTCCGAGCAGAAGCAGACAGGGAGCAGCCCCTGGGCCT------CCCTCCCCTTGCACTGAGCACCTAACTGTGCTCTCCATTAGCAGGGCCTCACCACCTA-----GCC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35055469 146 + 104879549 GTCAGAGCCCGGCTGAGGACTGCCCCCTGGAGACACCCATGGAAGGGGTCCGAGCAGAAGCAGATAGGGAGCAGCCCCTGGGCCT------CCCTCCCCTTGCACTGGGCACCTGACTGTGCTCTCCATTGGCAGGGCCTCACCACCTA-----GCC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73848591 146 - 130959383 GTCAGAGCCTGGCTAAGGACTGCCCCCTAGAGACACCCGTGGAAGGGGTCCGGGCAGAAGCAGACAGGGAGCAGCCCCTGGGCCT------CCCTCCCCTTGCACTGGGCACCTAGCTGTGCTCTCCATTGGCAGGGCCTCACCACCTA-----GCC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75409913 146 - 133195287 GTCAGAGCCTGGCTAAGGACTGCCCCCTAGAGACACCCGTGGAAGGGGTCCGGGCAGAAGCAGACAGGGAGCAGCCCCTGGGCCT------CCCTCCCCTTGCACTGGGCACCTAGCTGTGCTCTCCATTGGCAGGGCCTCACCACCTA-----GCC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73274435 146 - 125196307 GTCAGAGCCTGGCTAAGGACTGCCCCCTAGAGATACCCGTGGAAGGGGTCCGGGCAGAAGCAGACAGGGAGCAGCCCCTGGGCCT------CCCTCCCCTTGCACTGGGCACCTAGCTGTGCTCCCCATTGGCAGGGCCTCACCACCTA-----GCC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72106753 146 - 125710982 GTCAGAGCCTGGCTGAGGACTGTCCCCTAGAGATACCCGTGGAAGGGGTCCGGGCAGAAGCAGACAGGGAGCAGCCCCTGGGCCT------CCCTCCCCTTGCATTGGGCACCTAGCTGTGCTCTCCATTGGCAGGGCCTCACGACCTA-----GCC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75565375 140 - 121768101 CTCAGAGCCTGGCTGAGGACTGCCCCCTGGAGACCACGGTGGA----------TCAGAAGCAGACAGGGAGCAGCCCCTGGGCCT------CCCTTCCCTTACACTG-GCACCCATCTGTGCTCTCCACTGGCAGGGCCTCACCACCCACCTCGGCC i calJac3.chr12 C 0 C 0 s mm10.chr14 24171076 116 + 124902244 -TCACAGTTCAGCTCAGGAGGAACACGAAGAGTAAACC-----------CAGAGCCATAGCAAGCAGGAAGCACCCAGAAGACCTTAATGCTCCTCCCATACCACATGTCAAATACTT---------------------TTAACATCTA-------- i mm10.chr14 C 0 C 0 e canFam3.chr4 27725306 0 + 88276631 C a score=3581967.000000 s hg38.chr10_KI270825v1_alt 73574 1011 + 188315 ATCCTCATCTCCTGACCAG-CCC--CTAGAGACATTGGTCTCTCCCCTGACAAACCACAAGAAATCTTTTGGACACCTCCCAAATAGCAAGACATTATCTCTCCCCACCCCAAA------------CATCACCACCACCATAGCCTCTCCTGGTTCCTCCCCAGCCAAGGATCAAGCCCACACTGCTTGGCTTCCCTTTCAAGGCCTCTAC-ACCTGCCCCTGGGAATCTCGCCAGcctgccctc-------------cccacgacttgcccacgtccctg-ccctgagcacactccacaggt----gccctccatctgcaatgcccttcccccttttccacctggaaaaaccccactcatgcttccagttctagtgcgaatgccacactctctggggagacctccccaca-ccccagggagccctgcatgcccccc-acagc-------cctagagct--cagttacacat----------cttcct----ccctcactgccgtg------cctgacc------------------------aag----------------cctctcccaaggtctccttgctccagagatctaagaccctggcacacagtaggcgcccggtga---atact-gctgaaAGGACACACTTCGGATGTGCTCTTCTCATCAGAAA--CCCTCAAATAAAAGAGGTCGGCCTCGTGCCCCTTCACAG--------CGGTCTCACGTGGACATAGTACACACTTGGGACACCTAGGGCTGAGTGAGATGGGAGGGAGAAAC--AATGGAAAATTCTAAAACTAAGAGGCAAGGCTAGGGCATCAACTAGGGGTGAGAAAGGAGGAGCCCAGGTCCCTCCCACTTTACCTGGACATACAGTAAATGATTCCGACCCTCCCAACAGACCCTAGCAGGTCCCCTCATCCTGGGGAGACGCAAGCCCACGCCAGCTTGAGGTCACCCCATACCGGATGCTGTCACGCTCTGCTACAATCTTGTCTCGCTCCTGGAAGGCCCAGTCCCGCCGGCAC-TTGGCCACATCCGCCTCCTGGAGGGCTTCCTTCAGCTCCTGGCACAGAGCCTTGCACTGCTTTCGAAGGA--TTTCAACCTCCTTGTTGGCTCTC s panTro4.chr10 76451153 1011 + 133524379 ATCCTCATCTCCTGACCAG-CCC--CTAGAGACATTGGTCTCTCCCCTGACAAACCACAAGAAATCTTTTGGACACCTCCCAAATAGCAAGACATTATCTCTCCCCACCCCAAA------------CATCACCACCACCATAGCCTCTCCTGGTTCCTCCCCAGCCAAGGATCAAGCCCACACTGCTTGGCTTCCCTTTCAAGGCCTCTAC-ACCTGCCCCTGGGAATCTCGCCAGcctgccctc-------------cccacgacttgcccacatccctg-ccctgagcacactccacaggt----gccctccatctgcaatgcccttcccccttttccacctggaaaaaccccactcatgcttccagttctagcgtgaatgccacactctctggggagacctcctcaca-ccccagggagccctgcatgcccccc-acagc-------cctagagct--cagttacacat----------cttcct----ccctcactgccctg------cccgacc------------------------aag----------------cctctcccaaggtctcctagctccagagatctaagaccctggcacacagtaggcgcccggtga---atact-gctgaaAGGACACACTTCGGATGTGCTCTTCTCATCAGAAA--CCCTCAAATAAAAGACGTCGGCCTCGTGCCCCTTCACAG--------CGGTCTCACGTGGACATAGTACACACTTGGGACACCTAGGGCTGAGTGAGATGGGAGGGAGAAAC--AATGGAAAACTCTAAAACTAAGAGGCAAGGCTAGGGCATCAACTAGGGGTGAGAAAGGAGGAGCCCAGGTCCCTCCCACTTTACCTGGACATAGAGTAAATGATTCTGACCCTCCCAACAGACCCTAGCAGGTCCCCTCATCCTGGGGAGACGCAAGCCCACGCCAGCTTGAGGTCACCCCATACCGGATGCTGTCACGCTCTGCTACAATCTTGTCTCGCTCCTGGAAGGCCCAGTCCCGCCGGCAC-TTGGCCACATCCGCCTCCTGGAGGGCTTCCTTCAGCTCCTGGCACAGAGCCTTGCACTGCTTTCGAAGGA--TTTCAACCTCCTTGTTGGCTCTC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76114053 1009 - 133410057 ATCCTCATCTCCTGACCAG-CCC--CTAGAGACATTGGTCTCTCCCCTGACAAATCACAAGAAATCTTTTGGAAACCTCCCAAATAGCAAGACATTAT-----CCCACCCCAAA------------CATCACCACCACCATAGCTTCTCCTGGTTCCTCCCCAGCCAAGGATCAAGCCCACACTGCTTGGCTTCCCTTTCAAGGCCTCTAC-ACCCGCCCCTGGGAATCTCACCAGcctgccctc-------------cccatgacttgcccacgtccctg-ccctgagcacattccacaggt----cccctccatctgcaatgcccttcccccttttccacctggaaaaaccccactcatgcttccagttctagctcgaatgccatactctctggggagacctccccaca-ccccagggagccctgcatgcccccc-acagc-------cctagagct--cagttacacat----------cttcct----ccctcactgccctg------cccgacc------------------------aag----------------cctctcccaaggtctccctgctccagagatctaagaccctgacacacagtaggcgcccagtga---atact-gctgaaAGGACACACTTCGGATGTGCTCTTCTCATCAGAAA--CCCTCAAATAAAAGAGGTCGGCCTCGTGCCCCTTCACAG--------TGGTCTCATGTGGACATAGTACACACTTGGGACACCTAGGTCTGAGTGAGATGGGAGGGAGAAAC--AATGGAAAATTCTAAAACTAAGAGGCAAGGCTAGGGCATCAACTAGGGGTGAGAAAGGAGGAGCCCAGGTCCCTCCCACTTTACCTGGACATACAGTAAATGATTCTGACCCTCCCAACAGACCCTAGCAGGTTCCGGCATCCTGGGGAGACGCGAGCCCACGCCAGCTCGAGGGCACCCCGTACCGGATGCTGTCACGCTCTGCTACGATCTTGTCTCGCTCCTGGAAGGCCCAGTCCCGCCGGCACTTTGGCCACATCCGCCTCCTGGAGGGCTTCCTTCAGCTCCTGGCACAGAGCCTTGCACTGCTTTCGAAAGGATTTTCAACCTCCTTGTTGGCTCTC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35055615 1012 + 104879549 ATCCTCATCTCCTGACCAG-CCC--CTATAGGCATTGGTCTCTCCCCTGACCAACCACAAGGAATCTTTTGGAAACCTCCCAAATAGCAAGACATTATCTCTCCCCACCCCAAA------------CATCACCACCACCATAGCCTCTCCTGGTTCCTCCCCAGCGAAGGATCAAGCCCACACTGCTTGGCTTCCCTTTCAAGGCCTCTAC-ACCTGCCCCTGGGAATCTCACCAGcctgccctc-------------cccatgacttgcccacgtccctg-ccctgagcacactccacaggt----cccctccatctgcaatgcccttcccccttttccacctagaaaaaccccactcatgcttccagttctagctcgaatgccacgctctctggggagacctccccacacccccagggagccctgcatgtccccc-acagc-------cctggagct--cagttacacat----------cttcct----ccctcaccaccctg------cctgacc------------------------aag----------------cctctcccaaggtctccttgctccagagatctaacaccctggcacacagtaggcgcccagtga---atact-gctgaaAGGACACATTTCGGAGGTGCTCTTCTCATCAGAAG--CCCTCAAATAAAAGAGGTCTGCCTCATGCCCCTTCACAG--------GGGTCTCACATGGACATAGTACACACTCGGGACAGCTAGGGCTGAGTGAGATGGGAGGGAGAAAC--AATGGAAAATTCTAAAACTAAGAGGCAAGGCTAGGGCATCAACTAGGGGTGAGAAAGGAGGAGCCCAGGTCCCTCCCACCTTACCTGGACATACAGCAAACAATTCTGACCCTCCCAACAGACCGTAGCAGGTCCCCGCATCCTGGGGAGATGCGAGCCCACGCCAGCTCGAGGGCACCCCGTACCGGATGCTGTCACGCTCTGCTACGATCTTGTCTCGCTCCTGGAAGGCCCAGTCCCGCCGGCAC-TTGGCCACATCCGCCTCCTGGAGGGCTTCCTTCAGCTCCTGGCACAGAGCCTTGCACTGCTTTCGAAGGA--TTTCAACCTCCTTGTTGGCTCTC i nomLeu3.chr18 C 0 M 360 s rheMac3.chr9 73848737 1010 - 130959383 ATCCTCATCTCCTGATCAG-CCC--CTAGAGACATTGGTCTCTCCCCTGACCAACCACAAGGAATCTTCTGGAAACCTCCCAAATACCAAGACATTCTCTCTCCCCACCCCAAA------------CATCATCACGACCACAGCCTCTCCTGGATCCTCCCCAGCC-AGGATCAAGTCCACACTGCTTGGCTTCCCTTTCAAGGCCTCTAC-ACCTGCCCCTGGGAATCTCGCCAGCCCGCCCTC-------------CCCATGACtcatccatgtccctg-ccctgagcacacgccacaggt----cccctccgtctgcaatgcccttcccccttttccacctggaaaaaccccacgcgtgcttccagttctagctcgaatgccatgctctctggggagacctccccaca-ccccagggagccctgcatgcccccc-ACAGC-------CCTGGAGCT--CAGTCACGCAT----------CTTCCT----CCCTCACTGCCCTG------CCCACCC------------------------CAG----------------CCTCTCCCGAGGTCTCTTTGCTCCAGGGATTTGAGACCCTGGCACACAGCAGGCGCCTGGGGA---ATACT-GCTAAAAGGACGCATTTCGGATGTGCTCTTCTCATCAGAAG--CCCTCAAATAAAAGAGGTTGGCCTCATGCCCCTTCACAG--------GCGTCTCATGTGGACATAGTACATACTGAGGACATATAGGGCTGAGTGACATGGGAGGGAGAAAC--AATGGAAAATTCTAAAACTAAGAGGCAAGGCTGGGGCATCAACTAGGGGTGAGAAAGGAGGAGCCCAGGTCCCTCCCACCTTACCTGGACACACAGCAAACGATTCGGACCCTCCCAACAGACCCTAGCAGGTCCCCGCATCCTGGGGAGATGCGAGCCCATGCCAGCTCGAAGGCACCCCGTACCGGATGCTGTCACGCTCTGCTACGATCTTGTCTCGCTCCTGGAAGGCCCAGTCCCGCCGGCAC-TTGGCCACATCCGCCTCCTGAAGGGCTTCCTTCAGCTCCTGGCACAGAGCCTTGCACTGCTTTCGAAGGA--TTTCAACCTCCTTGTTGGCTCTC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75410059 1010 - 133195287 ATCCTCATCTCCTGATCAG-CCC--CTAGAGACATTGGTCTCTCCCCTGACCAACCACAAGGAATCTTCTGGAAACCTCCCAAATACCAAGACATTCTCTCTCCCCACCCCAAA------------CATCATCACGACCACAGCCTCTCCTGGATCCTCCCCAGCC-AGGATCAAGTCCACACTGCTTGGCTTCCCTTTCAAGGCCTCTAC-ACCTGCCCCTGGGAATCTCGCCAGCCTGCCCTC-------------CCCATGACtcatccatgtccctg-ccctgagcacacgccacaggt----cccctccgtctgcaatgcccttcccccttttccacctggaaaaaccccactcgtgcttccagttctagctcgaatgccatgctctctggggagacctccccaca-ccccagggagccctgcatgcccccc-ACAGC-------CCTGGAGCT--CAGTCACGCAT----------CTTCCT----CCCTCACTGCCCTG------CCCACCC------------------------AAG----------------CCTCTCCCGAGGTCTCTTTGCTCCAGGGATTTGAGACCCTGGCACACAGTAGGCGCCTGGGGA---ATACT-GCTAAAAGGACGCATTTCGGATGTGCTCTTCTCATCAGAAG--CCCTCAAATAAAAGAGGTTGGCCTCATGCCCCTTCACAG--------GCGTCTCATGTGGACATAGTACATACTGAGGACATATAGGGCTGAGTGACATGGGAGGGAGAAAC--AATGGAAAATTCTAAAACTAAGAGGCAAGGCTGGGGCATCAACTAGGGGTGAGAAAGGAGGAGCCCAGGTCCCTCCCACCTTACCTGGACACACAGCAAACGATTCGGACCCTCCCAACAGACCCTAGCAGGTCCCCGCATCCTGGGGAGATGCGAGCCCACGCCAGCTCGAAGGCACCCCGTACCGGATGCTGTCACGCTCTGCTACGATCTTGTCTCGCTCCTGGAAGGCCCAGTCCCGCCGGCAC-TTGGCCACATCCGCCTCCTGAAGGGCTTCCTTCAGCTCCTGGCACAGAGCCTTGCACTGCTTTCGAAGGA--TTTCAACCTCCTTGTTGGCTCTC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73274581 1009 - 125196307 ATCCTCATCTCCTGATCAG-CCC--CTAGAGACATTGGTCTCTCCCCTGACCAACCACAAGGAATCTT-TGGAAACCTCCCAAATACCAAGACATTATTTCTCCCCACCCCAAA------------CATCATCACGACCACAGCCACTCCTGGATCCTCCCCAGCC-AGGATCAAGTCCACACTGCTTGGCTTCCCTTTCAAGGCCTCTAC-ACCTGCCCCTGGGAATCTCGCCAGCCTGCCCTC-------------TCCATGACTCACCCATGTCCCTG-CCCTGAGCACACGCCACAGGT----CCCCTCCGTCTGCAATGCCCTTCCCCCTTTTCCACCTGGAAAAACCCCACTCGTGCTTCCAGTTCTAGCTTGAATGCCATGCTCTCTGGGGAGACCTCCCCACA-CCCCAGGGAGCCCTGCATGCCCCCC-ACAGC-------CCTGGAGCT--CAGTCACGCAT----------CTTCCT----CCCTCACTGCCCTG------CCCACCC------------------------AAG----------------CCTCTCCCGAGGTCTCGTTGCTCCAGGGATTTGAGaccctggcacacagtaggcgccTGGGGA---ATACT-GCTAAAAGGACGCATTTCGGATGTGCTCTTCTCATCAGAAG--CCCTCAAATAAAAGAGGTTGGCCTCATGCCCCTTCACAG--------GCGTCTCATGTGGACATAGTACATACTCAGGACATATAGGGCTGAGTGACATGGGAGGGAGAAAC--AATGGAAAATTCTAAAACTAAGAGGCAAGGCTGGGGCATCAACTAGGGGTGAGAAAGGAGGAGCCCAGGTCCCTCCCACCTTAGCTGGACACACAGCAAACGATTCGGACCCTCCCAACAGACCCTAGCAGGTCCCCGCATCCTGGGGAGATGCGAGCCCACGCCAGCTCAAAGGCACCCCATACCGGATGCTGTCACGCTCTGCTACGATCTTGTCTCGCTCTTGGAAGGCCCAGTCCCGCCGGCAC-TTGGCCACATCCGCCTCCTGAAGGGCTTCCTTCAGCTCCTGGCACAGAGCCTTGCACTGCTTTCGAAGGA--TTTCAACCTCCTTGTTGGCTCTC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72106899 1010 - 125710982 ATCCTCATCTCCTGATCAG-CCC--CTAGAGACATTGGTCTCTCCCCTGACCAACCACAAGGAATCTTTTGGAAACCTCCCAAATACCAAGACATTATCTCTCCCCACCCCAAA------------CATCATCACGACCACAGCCTCTCCTGGATCCTCCCCAGCC-AGGATCAAGTCCACACTGCTTGGCTTCCCTTTCAAGGCCTCTAC-ACCTGCCCCTGGGAATCTCGTCAGCCTGCCCTC-------------CCCATGACTCACCCAtgtccctg-ccctgagcacacgccacaggt----cccctccgtctgcaatgcccttcccccttttccacctggaaaaaccccactcgcgcttccagttctagctcgaatgccatgctctctggggagacctccccaca-ccccagggagccctgcatgcccccc-ACAGC-------CCTGGAGCT--CAGTCGCGCAT----------CTTCCT----CCCCCACTGCTTTG------CCCACCC------------------------AAG----------------CCTCTCCCGAGGTCTGTTTGGTCCAGGGATCTGAGACCCTGGCACACAGTAGGCGCCTGGGGA---ATACT-GCTAAAAGGACGCATTTCGGATGTGCTCTTCTCATCAGAAG--CCCTCAAATAAAAGAGGTCGGCCTCATGCCCCTTCACAG--------GCGTCTCATGTGGACATAGTACATACTCAGGACATATAGGGCTGAGTGACATGGGAGGGAGAAAC--AATGGAAAATTCTAAAACTAAGAGGCAAGGCTGGGGCATCAACTAGGGGTGAGAAAGGAGGAGCCCAGGTCCCTCCCACCTTACCTGGACACACAGCAAACGATTCAGACCCTCCCATCAGACCCTAGCAGGTCCCCACATCCTGGGGAGATGCGAGCCCACGCCAGCTCGAAGGCACCCCGTACCGGATGCTGTCACGCTCTGCTACGATCTTGTCTCGCTCCTGGAAGGCCCAGTCCCGACGGCAC-TTGGCCACATCCGCCTCCTGAAGGGCTTCCTTCAGCTCCTGGCACAGAGCCTTGCACTGCTTTCGAAGGA--TTTCAACCTCCTTGTTGGCTCTC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75565515 1016 - 121768101 ATCCTCATCTCCTGACCAGTCCC--CCAGAGACACTGGTCTCTCCCCTGGCCAACCGCAAGGAATCTTTTGGAAAACTCCCAAATACCAAGTCACTATCTCTCCCCACCCCAAAcaccaccaccaccaccaccaccaccacAGCCTCTCCTTGTTCTTTCCCAGCCAAGGATCAAGTCCACACTGCTTGGCTTCCCTCTTGAGGCCTCTAC-ATCTGCCCTTGGGAATTTCGCCAACCTGCCCTT-------------CCCATgacttgc------tcctg-ccctgagcacaccccacaggt----cacctccatctacaatatgcttcccctttttccacctagaaaaaccccactcatgcttccagttctagctcaaatgccatgctctctggggagacctcc-aata-ccccagggagccctgcatgcccccc-ACAAC-------CCTGGAGCTCACAGTCACACAT----------CTTCCT----CCCTCA-TGTCCTG------CCTGACC------------------------AAG----------------CCACTCCTAAGGTCTCCTTGTTCCAGGGATCTAAGACCCTGGTACATAGGAGGTGCCTCGTGA---ATACT-GCTGAAAGGATGCATTTTGGATGTG---TTCTTATCAGAAG--CCCTCAAATAAAAGAGGCCAGCCTTGTGCCCCTTCACAG--------GGGTCTCATGTGAACACAGCACACACTTGGGACATCTAGGGCTAAGTGAGATGGGAGGGAGAAACATAATGGAAAATTCTAAAACTAAGAGGCAAGGGTGGGGAATCATCTAGGGGTGAGAAAGGAAGAGCCCAGGTTCCTCCTACCTTACCTGGACATACTGCAAATGATTCTGACCCTCCCAACGGACCCTAGTACATCCCCG-ATCCCAGGGAGACACGAGCCCACGCCAGCTCGAGGGCACCCCATACCGGATGCTATCACGCTCTGCCACGATCTTGTCTCGCTCCTGGAAGGCCCAGTCTCGCCGGCAC-TTGGCCACATCCGCCTCCTGGAGGGCTTCCTTCAGCTCCTGGCACAGAGCCTTGCACTGCTTTCGAAGGA--TTTCCACCTCCTTGTTGGCTCTC i calJac3.chr12 C 0 C 0 s mm10.chr14 24171192 983 + 124902244 -TCTTCACCTCCCGAGCCT-CCCTGCCAG-GGCACAGGCCTGGCCCTTTTATAGTCTC-AGGGGTGTTCCAGATTCC-CTCAATGGCCAACTCACTGTGCCTTTCC--------------------CACCATC---------------CCTGGCTCTGCCCTGGCACAGGATCTTACCCACACTCCTTTGCTTCTATTCAAGACCCTCAGA-ATTGAAACTCAAGGGCATTGTCACCCTATTCCTAGTGATTCTCTAAACCAGGACCTGGCCACACCCAAAttcctcctcagaaactgcaggtgctgcccctctacccacagcgctcatcctccctcccctgctgacgaaaccgtactcgggctt-cagttctgcctcaaaGGGA-------CCTGGGAGACTTCCTTCCA-CCCT-GAGTGGCCTGCATGTCCCATGACAGCCTGAGGACCTGGATGT--CACCTTCATGTGCTGTCCTGCCCTCTG----ACCTTACAGCCCCT------CCTAGGCCACACCCCAGGTATAGACACACGGAAG----------------CCTCCTCTAAGCTCTTATTGCT-CGGGAACCTAAGATGCTGG--CACAGCAGATGTCTAGCAGCACAGACA-GAAAAAACAAAACACAT-----------TTCACAAAAGTGG--CTTCTAAAAAAAAAA--TTGGCTTTGATCC---------------------------TGAACACAGTTCACACTCAAGATGTCTAG----AAGTGAATCAGGAAGGAAATAT--AACAGAAATCTCTAAAGCCAAGAGGTGAGGT--GAGAAACGGCTGAGGGAGAGAAGGGAGGTACTACAGTCCCTGTCTCCTTCTCTGCACACACAGCCAATGAGTGTGACCCTACCAACAGACTGCAGTGCACAC----------GAGAAACACAGGACCATGCCTGCC------CAGTCCTTACCTGATGCTGTCACGCTCTGCCACAATCTTGTCCCGCTCCTGAAAGGCCCAGTCCCGCCGGCAC-TTGGCCACGTCTGCTTCCTGGAGGGCTTCCTTCAGCTCCTGGCACAAGGCCTTACACTGTTTTCGGAGGA--TTTCCACCTCTTTGTTGGCTCTC i mm10.chr14 C 0 C 0 s canFam3.chr4 27725306 950 + 88276631 ACCCTCACCTCCTGACTAG-CCT--TGGTAGGGAGCAGTCTCTCCTCCCGACCACCACAAGGGATCTTTCTGAAA-CTCTCAATGACCAAGTCAC-------------------------------CACAAGCACCACCACAGCCCCTCATGGCTCTACCCCAGCCAAGAATCAAGGCTACCCTGCAGGGTGTCCCTTTTGAGGCCCTCACTGCCTGCCATCAGGAACCCCCATCAGTTGCCTCT-------------CCTGTGACT--CCCAAGTCCACG-CCT-------GCCCCAGCTGT----GCCCCC--------GTGCCCTGC------------------ATGCCCCCATCATAGCTCTGACTGTGGC----------------CCTGGGA---TTCACCATA-TCAT----GGCCCT------CCCCT-GCTGC-------CCTG----T--C--TGACAAAG----------CTGCCTGTGGTCCCCACAGTGCTGGGCACCCCTGCCC------------------------GGGAGACTTGGAGGCTGTTTCTCTCCCAGGGTCTCCTTGTCCGAGGGACCTAAGATTTTGGCACACAGTAGGTGCCCAGAGA---ATACCAACTGAAAGAACACATTTTTGACATGTCTGTTTCATCAGAGGTCCCCCTAAGAAAAAAAAAACGTCTTTGTGCCTCCCCATGGCAGGGGGAGGGTCTCATCCAGACACGGTGCACACGCA-GACACATAGGTTGAAATAAAATGGGAAGCAGAGACATAATGGACACTTCGAACGCTATGAAGCAAGGCTGGGCCATCACCCCA-GGTGAGAAGAGAGGAACAGAGGCCACTCTCACCTCACCTGAACACGTGGCAAGTGATTCTGACCCTCCCCAAAGACCCAA---------TGCGTCATGGGGAGACTGGAGCCCGCTCCAGGCCAGGGGTTCCCTGTACCGGATGCTATCCCGCTCTGCCACGATCTTGTCCCGCTCCTGGAAGGCCCAGTCCCGCCGGCAC-TTGGCCACATCCGCCTCCTGGAGGGCTTCCTTCAGCTCTTGGCACAGAGCCTTGCACTGCTTTCGAAGGA--GTTCAGCCTCCTTGTTGGCTCTC i canFam3.chr4 C 0 C 0 a score=395149.000000 s hg38.chr10_KI270825v1_alt 74585 155 + 188315 CCAGCATCCATTGTCACCGTGTCTTTGATCTGGT-GGGAGCAAGGGG-------------------------------------------------CAG----------------------------------------GAAGAGGGAG-------AGGTTGCTGAG------------------CCTCATGGACCAGGAGCGCCTCCCA-CCAGTGCGGGGGCCAAGGCTGAGGCTCTAGGGAGCTGGATGGAGGGAAACACG------------GAGCCCA s panTro4.chr10 76452164 155 + 133524379 CCAGCATCCATTGTCACCGTGTCTTTGATCTGGT-GGGAGCAAGTGG-------------------------------------------------CAG----------------------------------------GAAGAGGGAG-------AGGTTGCTGAG------------------CCTCATGGACCAGGAGCGCCTCCCA-CCAGTGCGGGGGCCAAGGCTGAGGCTCTAGGGAGCTGGATGGAGGGAAACACG------------GAGCCCA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76115062 242 - 133410057 CCAGCATCCATTGTCACTGTGTCTTTGATCTGGTGGGGAGCAAGGGGGCNNNNNNNNNNGCACTGCTTCGAAGATTTCAACTCCTTGTGGCTCTCCCAGCATCCATGTCACTGTGTCTTGATCTGGTGGAGCAAGGGCAGAAGAGGGAG-------A-GTTGCTGAG-------------------CTCATGGACCAGGAGCG-CTCCCA-CCAGTGCGGGGGTCAAGGCTGAGGCTCTAGGGAGCTGGATGGAGGGAAACACA------------GAGCCCA i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73849747 151 - 130959383 CCAGCATCCATTGTCACCGTGTCTTTGATCTGGT-GGGAGTAAGGGG-------------------------------------------------CAG----------------------------------------GGAGAGGGAG-------AGGCTGCTGAG------------------CCTCATGGACCAGGAGCACCTCCCA-CCAGTGCAGGGGTCAAGGCTGAGGCTCTAGGGAGCTGGAT----GGAAACACG------------GAGCCCA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75411069 151 - 133195287 CCAGCATCCATTGTCACCGTGTCTTTGATCTGGT-GGGAGTAAGGGG-------------------------------------------------CAG----------------------------------------GGAGAGGGAG-------AGGCTGCTGAG------------------CCTCATGGACCAGGAGCGCCTCCCA-CCAGTGCAGGGGTCAAGGCTGAGGCTCTAGGGAGCTGGAT----GGAAACACG------------GAGCCCA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73275590 151 - 125196307 CCAGCATCCATTGTCACCGTGTCTTTGATCTGGT-GGGAGtaagggg-------------------------------------------------cag----------------------------------------ggagagggag-------aggctgCTGAG------------------CCTCATGGACCAGGAGTGCCTCCCA-CCAGTGCAGGGGTCAAGGCTGAGGCTCTAGGGAGCTGGAT----GGAAACACT------------GAGCCCA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72107909 151 - 125710982 CCAGCATCCATTGTCACCGTGTCTTTGATCTGGT-GGGAGTAAGGGG-------------------------------------------------CAG----------------------------------------GGAGAGGGAG-------AGGCTGCTGAG------------------CCTCATGGACCAGGAGCGCCTCCCA-CCAGCGCAGGGGTCAAGGCTGAGGCTCTAGGGAGCTGGAT----GGAAACACG------------GAGCCCA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75566531 154 - 121768101 CCAGCATCCATTGTCACTGTATCTTTGATCTGGT-TGGAGCAAGGGG-------------------------------------------------CAG----------------------------------------GGAGATGGGG-------AGGTTGCTGAG------------------CCTCAAGGACTAGGAGTGCCTCCCA-CCAGTGCAGGGGT-AGGGCTGAAGCTCTAGGGAGAGAGATGGGGGGAAATATG------------GAGCCTA i calJac3.chr12 C 0 C 0 s mm10.chr14 24172175 162 + 124902244 CCAGCATCCATGGTCACTGTGTCTTTGATCTAAG-GG----AAGAGG-------------------------------------------------TCG----------------------------------------GTAAAAGGGGTTACCCAATGCTTCCGAGTTAAGTGAAAGGGGTTACCCACATTTCCAAGCTGCAAAGCTTA-CCAGCTCAGCGGTGGGGCTGGAGGCTCAAG--------------GGAAACACG------------AAGCCCA i mm10.chr14 C 0 I 869 s canFam3.chr4 27726256 160 + 88276631 CCGGCATCCATTGTCACCGTGTCTTTGATCTGCT-GGGGTCAAGGGG-------------------------------------------------TGA----------------------------------------GCAGAGGG-G-------TGGTTACTGAG------------------CTTCCTGGCCCAGAAGTGCCCTCTAGCTGGTGCAGGGGCTGA-------ACCCTCAGGAGCTGGATGGAAGGAAACACAGGATCCTAGCCTGAGCCCA i canFam3.chr4 C 0 C 0 e nomLeu3.chr18 35056627 360 + 104879549 M a score=120954.000000 s hg38.chr10_KI270825v1_alt 74740 48 + 188315 TCGCAGCACAC----------CCCATA-CC-------------CCCAGTGACT--GCA--CCCCACAGCCACGGTC s panTro4.chr10 76452319 48 + 133524379 TCGCAGCATAC----------CCCATA-CC-------------CCCAGTGACT--GCA--CCCCACAGCCACGGTC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76115304 57 - 133410057 TCGCAGCACACCCCCTC--CACCCATACCC-------------CCCAGTGACT--ACA--CCCCACAGCCACGGTC i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73849898 56 - 130959383 TCGCAGCACACCCCCGC--CACCCATA-CC-------------CCCAGTGACT--ACA--CCCCACAGCCACTGTC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75411220 56 - 133195287 TCGCAGCACACCCCCGC--CACCCATA-CC-------------CCCAGTGACT--ACA--CCCCACAGCCACTGTC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73275741 56 - 125196307 TCGCAGCACACCCCCTC--CACCCATA-CC-------------CCCAGTGACT--ACA--CCCCACAGCCACTGTC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72108060 56 - 125710982 TCGCAGCACACCCCCTC--CACCCATA-CC-------------CCCAGTGACT--ACA--CCCCACAGCCACTGTC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75566685 59 - 121768101 TGGCAGCACACCCCCTCTGCACCTATA-CC-------------CCCAGTGACTACACA--CCCCACAG-CACGGTC i calJac3.chr12 C 0 C 0 s canFam3.chr4 27726416 73 + 88276631 TCCCAACACACCCCTGCTGCACCTGCA-CCACGCCCCGCCCCTCCCCGTGACT--ACATGTCCCACAGCCACACTC i canFam3.chr4 C 0 I 490 e mm10.chr14 24172337 869 + 124902244 I e nomLeu3.chr18 35056627 360 + 104879549 M a score=108037.000000 s hg38.chr10_KI270825v1_alt 74788 58 + 188315 CTATTAACCAGCA-CCCCC----TAGCCCCCGCCATGTCTGTGATCC-------TATAATCTGGCATACT s panTro4.chr10 76452367 58 + 133524379 CTATTAACCAGCA-CCCCC----TAGCCCCCACCATGTCTGTGATCC-------TATAATCTGGCATACT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76115361 57 - 133410057 CTATTAACCAGC--CCCCC----CAGCCCCCACCATGTCTGTGATCC-------TATAATCTGGCATACT i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73849954 69 - 130959383 CTATTAACCAGCGCCCCCCCCCACAG-CCCCACCGTGTCTGTGATCCTGGTTTTTATAATCTGGCAAGCC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75411276 69 - 133195287 CTATTAACCAGCG-CCCCCCCCACAGCCCCCACCGTGTCTGTGATCCTGGTTTTTATAATCTGGCAAGCC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73275797 68 - 125196307 CTATTAACCAGcc-ccccccccACAG-CCCCCACGTGTCTGTGATCCTGGTTTTTATAATCTGGCAAGct i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72108116 69 - 125710982 CTATTAACCAGCC-CCCCCCCCACAGCCCCCACCATGTCTGTGATCCTGGTTTTTATAATCTGGCAAGCT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75566744 60 - 121768101 CTATTAACTAGCT-CC-------CAGCCCCCACCACGTCTGCGATCCTGGTT--TATAATCTGGCATACT i calJac3.chr12 C 0 C 0 e canFam3.chr4 27726489 490 + 88276631 I e mm10.chr14 24172337 869 + 124902244 I e nomLeu3.chr18 35056627 360 + 104879549 M a score=909426.000000 s hg38.chr10_KI270825v1_alt 74846 344 + 188315 GAGTTATTTTTAAAGACAAAA-ATACACCAGTATTCCTGCTGGTGAAGTGCTGTGTATCTCAGTTCATTT-AAAAAGCTGAAATCCAAAGCATTTGCATCTTGAC-ACATCCCTAGAGAGTTATATGCTCCACT-AAAATTTCAAGTCAAACTCTTAGTAGCACTCATATGAAAA-CCCCCTCCACACCTCTATAATCCTTAGACAACACAGGGAAATGACGGATGACAAAGCAAGTGTTTACTGCAAGAATAACTCCTCCTCCCGCTT-GAGGCTTTCCAAACATGCAAAAGAGAAGCACGACAGCAGAGGCGCTGATGACACTGGTGTCCCCGCCCCGAGACTCTCCA s panTro4.chr10 76452425 344 + 133524379 GAGTTATTTTTAAAGACAAAA-ATACACCAGTATTCCTGCTGGTGAAGTGCTGTGTATCTCAGTTCATTT-AAAAAGCTGAAATCCAAAGCATTTGCATCTTGAC-ACATCCCTAGAGAGTTATATGCTCCACT-AAAATTTCAAGTCAAACTCTTAGTAGCACTCATATGAAAA-CCCCCTCCACACCTCTATAATCCTTAGACAACACAGGGAAATGACGGATGACAAAGCAAGTGTTTACTGCAAGAATAACTCCTCCTCCCGCTT-GAGGCTTTCCAAACATGCAAAAGAGAAGCACGACAGCAGAGGCGCTGATGACACTGGTGTCCCCGCCCCGAGACTCTCCA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76115418 346 - 133410057 GTGTTATTTTTAAAGACAAAA-ATACACCAGTATTCCTGCTGGTGAAGTGCTGTGTATCTCAGTTCATTT-AAAAAGCTGAAATCCAAAGCATTTGCATCTTGAC-ACATCCCTAGAGAGTTATATGCTCCACCAAAAATTTCAAGTCAAACTCTTAGTAGCACTCATATGAAAAGCCCCCTCCACACCTTTATAATCCTTAGAAAACACAGGGAAATGACGGATGACAAACCAAGTGTTTACTGCAAGAATAACTCCTCCCCCCGCTC-GAGGCTTTCCAAACACGCAAAAGAGAAGCACGACAGCAGAGGCGCTGATGATACTGGTGTCCCCGCCCCGAGACTCTCCA i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73850023 345 - 130959383 GAGTTATTTTTAAAGACAAAA-ATACATCGGTGTTCCTGCTGGTGAAGTGCTGTGTATCTCAGTTCGTTT-AAAAAGCTGAAATCTGAAGCATTTGTATCTTGGC-ACATCCCTAGAGAGTTATATGCTCCACT-AAAATTTCAAGTCAAACTCTTAGAAGCACTCATATGAAAAGCCCCC-CCACACCTCTATAATCCTTAGAAAACACGGAGAAATGATGGATGACAAAGTGAGTGTTTACTGCAAGAATAACTCCTCCCCTGGCTCAAAGGCTTTCCAAACATGCAAAACAGAAGCATGACAACAGAGGCAGTGATGACACTGGTGTCCCCGCCCCGAGACTCTCCA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75411345 345 - 133195287 GAGTTATTTTTAAAGACAAAA-ATACATCGGTGTTCCTGCTGGTGAAGTGCTGTGTATCTCAGTTCGTTT-AAAAAGCTGAAATCTGAAGCATTTGTATCTTGGC-ACATCCCTAGAGAGTTATATGCTCCACT-AAAATTTCAAGTCAAACTCTTAGAAGCACTCATATGAAAAGCCCCC-CCACACCTCTATAATCCTTAGAAAACACGGAGAAATGATGGATGACAAAGTGAGTGTTTACTGCAAGAATAACTCCTCCCCTGGCTCAAAGGCTTTCCAAACACGCAAAACAGAAGCATGACAACAGAGGCAGTGATGACACTGGTGTCCCCGCCCCGAGACTCTCCA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73275865 346 - 125196307 gagttatttttaaagacaaaa-atacatcGGTGTTCCTGCTGGTGAAGTGCTGTGTATCTCAGTTCGTTT-AAAAAGCTGAAATCCGAAGCATTTGTATCTTGGC-ACATCCCTAGAGAGTTATATGCTCCACT-AAAATTTCAAGTCAAACTCTTAGAAGCACTCATATGAAAAGCCCCCTCCACACCTCTATAATCCTTAGAAAACACGGAGAAATGATGGATGACAAAGTGAGTGTTTACTGCAAGAATAACTCCTCCCCTGGCTCAAAGGCTTTCCAAACACGCAAAACAGAAGCATGACAACAGAGGCGGTGATGACACTGCTGTCCCCGCCCCGagactctcca i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72108185 346 - 125710982 GAGTTATTTTTAAAGACAAAA-ATACATCAGTATTCCTGCTGGTGAAGTGCTGTGTATCTCAGTTCGTTT-AAAAAGCTGAAATCCAAAGCATTTGTATCTTGGC-ACATCCCTAGAGAGTTATATGCTCCACT-AAAATTTCAAGTCAAACTCTTAGAAGCACCCATATGAAAAGCCCCCTCCACACCTCTATAATCCTTAGAAAACACGGAGAAATGATGGATGACAAAGTGAGTGTTTACTGTAAGAATAACTCCTCCCCTGGTTCAAAGGCTTTCCAAACACGCAAAACAGAAGCATGACAACAGAGGCGGTGATGACACTGGTGTCCCCGCCCCGAGACTCTCCA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75566804 347 - 121768101 GACCTATTTTTAAAAACAAAATACACACCAGTATTCCTGCTGGTAAAGTGTTGTGTACCTCAGTTCATTT-AAAAAGCTGAAATCTGGAGCATTTGCATCTTGACAATGTCCCTAGAGAGTTACATGCTCCACT-AAAATTTCAAGTCAAACTCTTAGAAGCACTCATATGGAAAGCCCCCTTCACACCTCTATAATCCTTAGAAAACATGAAGAAATGTCAGACGATAAATCGAGTATTTACTGCAAGAATAACAACTCCTCCGGCTCGAAGGCTTTCCAAACACGCAAAACAGAAGCATGACAGCAGAGGCGCTGATGACACTGG-GTCCCCACCCGGGGATTCTCCA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27726979 336 + 88276631 GAGTTATTTTTAAATCCGAAA-ATACCCCAGTGTTTTCGCTGGAGAAGTCCTGTGTGTCTCAGTTTGTTTAAAAAAGCTGAAATCTGAACCAGTTGCACCTTGAC-ACCTCCCCAAAGCATTACATGCTCTGCT-ACCATTTTGAATCAAAGTCTTGGAAGCACTTGTAGAAAAAGCTCCCTCTGTACCCCGATAATCCTTAGACGACACGGGGGGA-----AATGACAGAGTGAGTGTCTACCGCAGGAGGAATTCCCGATGCAGCTCGAAGGCTTTCAGAA---ACAAAGCACAGACAGGACACGAGAGGGGCAGGTGGCGCT---GCATCTGCGCCAGGAATCCCCA i canFam3.chr4 I 490 C 0 e mm10.chr14 24172337 869 + 124902244 I e nomLeu3.chr18 35056627 360 + 104879549 M a score=1228496.000000 s hg38.chr10_KI270825v1_alt 75190 391 + 188315 CCCCCAAGTGCTAGGACACAGGAAGACACACACGC----ACAGGAAGAAAGCTT-CCGTTCCCTCTAAAGATCATTCTCCAGACAGCAGGAGACAGCA---GCCTCTACAAAAATGTGTTCAGAAAGATCTCAGA-------CGTAGAAAA---------------CAAGAGAAGAGAATGAAGTTGACAAGAAAACACCTGGAGTCAGTTGATAATTCCC-CTCATCTCTGAAA-ACAGAGGCAGAGGAGCTGAAAAATAATTTGCACAAAAAGGACCATCAAAACTCGAGGGTGACAGTGCAGTGGCAGGCTTTCCTCAGACCTCACGGTTTCTGGGGGTCATTCAAATCATTTCAGTTTTGA---TTTTTTTTTCAGCTTTACATGGTATGCTGTGTTTGTTTAGTTTGCTATTTTCAAAAAA s panTro4.chr10 76452769 388 + 133524379 CCCCCAAGTGCTAGGACACAGGAAGACACACACGC----ACAGGAAGAAAGCTT-CCGTTCCCTCTAAAGATCATTCTCCAGACAGCAGGAGACAGCA---GCCTCTACAAAAACGTGTTCAGAAAGATCTCAGA-------CGTAGAAAA---------------CA--AGAAGAGAATGAAGTTGACAAGAAAACACCTGGAGTCAGTTGATAATTCCC-CTCATCTCTGAAA-ACAGAGGCAGAGGAGCTGAAAAACAATTTGCACAAAAAGGACCATCAAAACTCGAGGGTGACAGTGCAGTGGCAGGCTTTCCTCAGACCTCACGGTTTCTGGGGGTCATTCAAATCATTTCAGTTTTGA----TTTTTTTTCAGCTTTACATGGTATGCCGTGTTTGTTTAGTTTGCTATTTTCAAAAAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76115764 390 - 133410057 CCCCCAAGTGCTAGGACACAGGAAGACACACACGC----ACAGGAAGAAAGCTT-CCGTTCCCTCTAAAGATCATTCTCCAGACAGCAGGAGACAGCA---GCCTCTACAAAAACGTGTTCAGAAAGATCTCAGA-------CATAGAAAA---------------CAAGAGAAGAGAATGAAGTTGACAAGAAAAAACCTGGAGTCAGTTGATAATTCCC-CTCATCTCTCAAA-ACAGAGGCAGAGGAGCTGAAAAACAATTTGCACAAAAAGAACCATCAAAACTCGAGGGTGACAGTGCAGTGGCAGGCTTTCCTCAGACCTCACAGTTCCTGGGAGTCATTCAAATCATTTCAGTTTTGA---TTTTTTTTTCAGCTTTACATGGTATGCCGTGTTTGTTTAGTTTGCTATTTTC-AAAAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35056987 391 + 104879549 CCCCCAAGTGCTAGGACACAGGAAGACACACATGC----ACAGGAAGAAAGCTT-CCGTTCCCTCTAAAGATCATTCTCCAGACAGCAGGAGACAGCA---GCCTCTACAAAAAACGCGTCAGAAAGACCTCAGA-------CATAGAAAA---------------CAAGAGAAGAGAATGAAGTTGACAAGAAAACACCTGGAGTCAGTTGATAATTCCC-CTCACCTCTCAAA-ACAGAGGCAGAGGAGCTGAAAAACAATTTGCACAAAAAGGACCATCAAAACTTGAGGGTGACAGTGCAGTGGCAGGCTTTGCTCAGACCTCACAGTTCCTGGGAGTCATTCAAATCATTTCAGTTTTGA---TTTTTTTTTCAGCTTTACATGGTATGCCATGTTTGTTTAGTTTGCTATTTTCAAAAAC i nomLeu3.chr18 M 360 C 0 s rheMac3.chr9 73850368 391 - 130959383 CCCTCAAGTGCTAGGACACAGGAAGACACACACGC----ACAGGAAGAAAGCTT-CCGTTCCCTCTAACGATCATTCTCCAGAGAACAGGAGATGGCA---GCCTCTGCAAAAACATGTTCAGAAAGATCTCAGA-------CATAGAAAA---------------CAAGAGAAGAGAATGAAGCTGACAAGAAAACACCTACAGTCAGTTGATAAATCCC-CCCATCTCTCAAA-ACAGAGGCAGAGGAGCTGAAAAACAATTTGCACAAAAAGGACCATCAAAGCTCGAGGGTGCCAGTGCAGTGGCTGGCTTTGCTCGGACCTCACGGTTCCTGGGAGTCATTCAAATCATTTCAGTTTTGA---TTATTTTTTCAGCTTTACATGGTATGCCGTGTTTGTTTAGTTTGCTATTTTCCAAAAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75411690 391 - 133195287 CCCTCAAGTGCTAGGACACAGGAAGACACACACGC----ACAGGAAGAAAGCTT-CCGTTCCCTCTAACGATCATTCTCCAGAGAACAGGAGATGGCA---GCCTCTGCAAAAACATGTTCAGAAAGATCTCAGA-------CATAGAAAA---------------CAAGAGAAGAGAATGAAGCTGACAAGAAAACACCTACAGTCAGTTGATAAATCCC-CCCATCTCTCAAA-ACAGAGGCAGAGGAGCTGAAAAACAATTTGCACAAAAAGGACCATCAAAGCTCGAGGGTGCCAGTGCAGTGGCTGGCTTTGCTCGGACCTCACGGTTCCTGGGAGTCATTCAAATCATTTCAGTTTTGA---TTATTTTTTCAGCTTTACATGGTATGCCGTGTTTGTTTAGTTTGCTATTTTCCAAAAA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73276211 391 - 125196307 ccctcaagtgcTAGGACACAGGAAGACACACACGC----ACAGGAAGAAAGCTT-CCGTTCCCTCTAACGATCATTCTCCGGAGAACAGGAGATGGCA---GCCTCTGCAAAAACATGTTCAGAAAGATCTCAGA-------CAtagaaaa---------------caagagaagaaaatgaagctgaCAAGAAAACACCTACAGTCAGTTGATAAATCCC-CCCACCTCTCAAA-ACTGAGGCAGAGGAGCTGAAAAACAATTTGCACAAAAAGGACCATCAAAGCTCGAGGGTGCCAGTGCAGTGGCTGGCTTTGCTCGGACCTCACGGTTCCTGGGAGTCATTCAAATCATTtcagttttga---ttattttttcagctttacaTGGTATGCCGTGTTTGTTTggtttgctattttaaaaaaa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72108531 391 - 125710982 CCCTCAAGTGCTAGGACACAGGAAGACACACACGC----ACAGGAAGAAAGCTT-CCGTTCCCTCTAAAGATCATTCTCCAGAGAACAGGAGATGGCA---GCCTCTGCAAAAACATGTTCAGAAAGATCTCAGA-------CATAGAAAA---------------CAAGAGAAGAGAATGAAGTTGACAAGAAAACACCTACAGTCAGTTGATAAATCCC-CCCATCTCTCAAA-ACAGAGGCAGAGGAGCTAAAAAACAATTTGCACAAAAAGGACCATCAAAACTCGAGGGTGCCAGTGCAGTGACTGGCTTTGCTCGGACCTCACAGTTCCTGGGAGTCATTCAAATCATTTCAGTTTTGA---TTATTTTTTCAGCTTTACATGGTATGCCGTGTTTGTTTAGTTTGCTATTTTCAAAAAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75567151 395 - 121768101 CCCCCAAGTGCTAGGACACAGGAAGACAGGCACGC----ACAGGAAGAAAGCTT-CCGTTCCCTCTACAGAGCATTCTCCAGAGAGCAGGAAACAGCAGCCGCCTCTGCAAAAGCATGTTTAGAAAGATCTCAAG-------TGTAGAAAA---------------CAAGGGAAGAGTATGAAGTTGACAAGAAAACACCTGGAGTCAGTTGATAATTCCC-CTCATCTCTCAAA-ACAGAGGCAGAGGAGCTGAAAAACAATTTGCACAAAAAGGACCGTCAAAACTCCAGGGTGACAGTGCAGTGGCAGGCTTTGCTCAGACCTCATGGTTCCCGTGAGTCATTCAAATCATTTCTGTTTTGATTTTTTTTTTTTTAGCTTTACAAGGTACGCAGCGTTTGTTTAGTTTGCTATTT--AAAAAT i calJac3.chr12 C 0 C 0 s canFam3.chr4 27727315 359 + 88276631 CCTCTGAGCAGCAGGGGCGAGGAAGACAAACAGGCCTCTGCTGAACCACAGCTTGCCGTCCACGC-----------------GGAGCTGGACAC-GCT---ACCTCGGCTAAGACGCGTTCGAAAAGACCTCAAAGGTTCAGCAAAAAAAAAAAAAAAGGTTCAGCCAAGACAGGAGGATGAGACAG--AGGAAAACACACAGGGTCAGCTCACAGGCCCCGCTCATCTCTCAAGTACAGAGTCA--------AGACTAAAGTCTGCACAGAAAGTAC--------------------------------ACCTTGGCTCACACCTCACATTTTCCGAGATCAATTCCAATAATTTCCGTTTTGA----TTTTTTCCCACTTTCATGTCGTGGGGAGGATCTGTTTACTTTGCTATTTTTTAAAGA i canFam3.chr4 C 0 I 325 e mm10.chr14 24172337 869 + 124902244 I a score=1032986.000000 s hg38.chr10_KI270825v1_alt 75581 370 + 188315 AA--AAATCCTTCTTAAATTTTCATTTTAAAAAGAATTATTTGGGggcagggtacagtggctcacacctgtaatcccagcactttgggaggccaaggcaggcagatcacatgagatcaggagtttgagaccagcctgaccaacatggtaaaaccccatctctactaaaactacaaaaattagccagacatggtggcatgtgcctgtggtcccagctacatgggagactgaggcaggagaattgcttgaacttgggagactgaggtctcagtgagcccagatggcgccactgcactccagcctggacaacagagggagactcggtctcaaaaaaaaaaaaaaaaaaaaaaaaaaaGTGTATTAATTTAGTCAA s panTro4.chr10 76453157 369 + 133524379 AA--AAATCCTTCTTAAATTTTCATTTTAAAAAGAATTATTTGGGggcagggtacagtggctcacacctgtaatcccagcactttgggaggccaaggcaggcagatcacatgagatcaggagtttgagaccagcctgaccaacatggtaaaaccccatctctactaaaactacaaaaattagccagacatggtggcatgtgcctgtggtcccagctacacgggagactgaggcaggagaattgcttgaacttgggagactgaggtctcagtgagcccagatggcgccactgcactccagcctgggcaacagagggagactcggtctc-aaaaaaaaaaaaaaaaaaaaaaaaaaGTGTATTAATTTAGTCAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76116154 357 - 133410057 AA--AAATCCTTCTTAAATTTTCATTTTAAAAAGAATTATTTGGGggcagggtacagtggctcacacctgtaatccaagcactttgggaggccaaggcaggcagatcacataagatcaggagtttgagaccagcctgaccaacatagttaaaccccatctctactaaaactacaaaaattagccggacatggtggcatgtgcctgtggtcccagctacacggaagactgaggcaggagaatcgcttgaacttgggagactgaggtctcagtgagcccagatagcgccactgcactccagcctgggcaacagaaggcgactcggtctc-------------aaaaaaaaaaaaaaGTGTATTAATTTAGTCAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35057378 367 + 104879549 AA--AAATCCTTCTTAAATTTTCATTTTAAAAAGAATTATTTGGGggcaggatacagtggctcacacctgtaatcccagcactttgggaggccgaggcaggcagatcacatgagatcaggagtttgagaccagcctgaccaacatggtaaaaccccatctctactaaaactacaaaaactagccggacatggtggcatgtttctgtgg-cccagctacatgggagactgaggcaggagaatcgcttgaacttgggagacggaggtcacagtgagcccagatggtgccactgcactccagcctgagcaacagagggagactcggtct--aaaaaaaaaataataaaaaataaaaaGTGTATTAATTTAGTCAA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73850759 362 - 130959383 AA--TA----TCCCTAAATTTTCATTTTAAAAAGAATTATTTGGGggcagggtacagtggctcagacctgtaatcccagcactttgggaggccaaggcaggcagatcacatgagatcaggagttcgagaccagcctggccaacatggtgaaaccccatttctactaaaactacgaaaattagccagacatggtggcatgtgcctgtggtcccagctccgcgggagactgaggcaagagaatcacttgaacttgggagacagaggtcgcagtgagcccagatggcgccaactcactccagcctggacaacagagtgagactcggtttc----aaaaaaaaaaaaaaaaaaaaaaaGTGTATTAATTTAGTCAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75412081 361 - 133195287 AA---A----TCCCTAAATTTTCATTTTAAAAAGAATTATTTGGGggcagggtacagtggctcagacctgtaatcccagcactttgggaggccaaggcaggcagatcacatgagatcaggagttcgagaccagcctggccaacatggtgaaaccccatttctactaaaactacgaaaattagccagacatggtggcatgtgcctgtggtcccagctccacgggagactgaggcaagagaatcacttgaacttgggagacagaggtcgcagtgagcccagatggcgccaactcactccagcctggacaacagagtgagactcggtctc----aaaaaaaaaaaaaaaaaaaaaaaGTGTATTAATTTAGTCAA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73276602 355 - 125196307 aa--aa----tccttaaattttcattttaaaaattattatttgggggcagggtacagtggctcatacctgtaatcccagcactttgggaggccaaggcaggcagatcacatgagatcaggagttcgagaccagcctggccaacatggtgaaacctcatttctactaaaactacgaaaattagccagacatggtggcatgtgcctgtggtcccagctccacgggagactgaggcaggagaatcacttgaacttgggagacagaggtcgcagtgagcccagatggcgccaactcactccagcctggacaacagagtgagactcggtctc-----------aaaaaaaaaaaaaaaagtgtattaatTTAGTCAA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72108922 358 - 125710982 AAAAAA----TCCTTAAATTTTCATTTTAAAAAGAATTATTTGGGggcagggtacagtggctcacacctgtaatcccagcactttgggaggccaaggcaggcagatcacatgagatcaggagttcgagaccagcctggccaacatggtgaaaccccatttctactaaaactacgaaaattagccagacatggtggcatgtgcctgtggtcccagctccacgggagactgaggcaggagaattgcttgaacttgggagacagaagtcgcagtgagcccagatggcgccaactcactccatcctggacaacagagtgagactcggtctc----------aaaaaaaaaaaaaaaaaGTATATTAATTTAGTCAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75567546 367 - 121768101 TA--AAATCCTTCTGAAATTTTAATTTTAAAAAGAATTATTTGGGgaccgggtacggtggctcacacctgtaatcccagcactttgggaggccaaggcgggcggatcacgtgagatcaggagttcgagaccagcctggccaacagggtggacccctgcttctaccacaaacacaaaaattagccaggtgcggtggtgtgtgcctgtggtcccagctacatgggaggctgaggcatgagaattgcttgaacttgggagacagagattgcagcaacaccagatcgtgccactgcactccaacccgggcaatagagggagactcggtctc---aaaaaaaaaaaagaaaaaaaTTATTTGTATTAATTTACTCAA i calJac3.chr12 C 0 I 307 e canFam3.chr4 27727674 325 + 88276631 I e mm10.chr14 24172337 869 + 124902244 I a score=256156.000000 s hg38.chr10_KI270825v1_alt 75951 89 + 188315 GAATTTATGATAAACAAT--ACTTTGAAAAATTTACATTATATTTGCTGTTTTACAATATATTTATGGATAGTTTTAGAGCTGACAC--GTTA s panTro4.chr10 76453526 89 + 133524379 GAATTTATGATAAACAAT--ACTTTGAAAAATTTACATTATATTTGCTGTTTTACAATATATTTATGGATAGTTTTAGAGCTGACAC--GTTA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76116511 89 - 133410057 GAATTTATGATAAACAAT--ACTTTCAAAAATTTACATTATATTTGCTGTTTTACAATATATTTATGGATGGTGTTAGAGCTGACAC--ATTA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35057745 89 + 104879549 GAATTTATGATAAACGAT--ACTTTTAAAAATTTACATTATACTTGCTGTTTTACAATATATTTATGGATAGTTTTAGAGCTGACAC--GTTA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73851121 91 - 130959383 GAATTTATGATAAACAAT--ACTTTTCAAAATTTACATTATACTCACTGTTTTACAATATATTTATGGATAGTTTTAGAGCTGACACATGTTA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75412442 91 - 133195287 GAATTTATGATAAACAAT--ACTTTTCAAAATTTACATTATACTCACTGTTTTACAATATATTTATGGATAGTTTTAGAGCTGACACATGTTA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73276957 91 - 125196307 GAATTTATGATAAacaat--acttttcaaaatttacatTAGACTCACTGTTTTACAATATATTTATGGATAGTTTTAGAGCTGACACATGTTA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72109280 91 - 125710982 GAATTTATGATAAAAAAT--ACTTTTCAAAATTTACATTATACTCACTGTTTTACAATATATTTATGGATAGTTTTAGAGATGACACATGTTA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75568220 93 - 121768101 gaaTTTATGACAAATAATCACTTTTTAAAGATTTACATTATACTCGCTGTTTTACAATATATTTATGGATAGTTTTAGAGCTGACACGTGTTA i calJac3.chr12 I 307 C 0 e canFam3.chr4 27727674 325 + 88276631 I e mm10.chr14 24172337 869 + 124902244 I a score=478472.000000 s hg38.chr10_KI270825v1_alt 76040 153 + 188315 CCACGTGGATTCCCTGAAAGGTTTCTCCATGGTGCTCTAGATGAGCATCTAGGAGGGAGGCCCCAGGTGCAGACAGGACGACAGGCAGCGCAGGAGGTGGGCAGCTCC-CCCAGCCCACAGCTCCCTTCCTTTCCCTGGGCCCCACACCATTGC s panTro4.chr10 76453615 153 + 133524379 CCACGTGGATTCCCTGAAAGGTTTCTCCATGGTGCTCTAGATGAGCATCTAGGAGGGAGGCCCCAGGTGCAGACAGGACGACAGGCAGCGCAGGAGGTGGGCAGCTCC-CCCAGCCCACAGCTCCCTTCCTTTCCCTGGGCCCCACACCATTGC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76116600 153 - 133410057 CCACGTGGATTCCCTGAAAGGTTTCTCCACGGTGCTCTGGATGAGCATCTAGGAGGGAGGCCCCAGGTACAGACAGGACGAGAGGCAGCGCAGGAGGTGGGCAGCTCC-CCCAGCCCACAGCTCCCTTCCTTCCCCTGGGCCCCACACCACTGC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35057834 153 + 104879549 CCATATGGATTCCCTGAAAGGTTTCTCCATGGTGCTCTGGATGAGCATCTAGGAGGGAAGCCCCAGGTGCAGACAGGACGAGAGGCAGTGCAGGAGGTGGGCAGCTCC-CCCAGCCCTCAGATCCCTTCCTTCCCCTGGGCCCCACGCCATTGC i nomLeu3.chr18 C 0 M 100 s rheMac3.chr9 73851212 150 - 130959383 CCACGTGGATTCCCTGAAAGGTTTCTCCATGGTGCTCTGGATGAGCATCT---AGGGAGGCCCCAGGTGCAGACAGGAGGAGAAGCAGCGTAGGAGGTGGGCAGCTCC-CCCAGCCCACAGCTCCCTTCCTTCCCCTGGGCCCCACGCCATTGC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75412533 150 - 133195287 CCACGTGGATTCCCTGAAAGGTTTCTCCATGGTGCTCTGGATGAGCATCT---AGGGAGGCCCCAGGTGCAGACAGGAGGAGAGGCAGCGTAGGAGGTGGGCAGCTCC-CCCAGCCCACAGCTCCCTTCCTTCCCCTGGGCCCCACGCCATTGC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73277048 150 - 125196307 CCACGTGGATTCCCTGAAAGGTTTCTCCATGGTGCTCTGGATGAGCATCT---AGGGAGGCCCCAGGTGCAGACAGGAGGAGAGGCAGTGTAGGAGGTGGGCAGCTCC-CCCAGCCCAcagctcccttccttcccctgggCTCCACGCCATTGC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72109371 150 - 125710982 CCACGTGGATTCCCTGAAAGGTTTCTCCATGGTGCTCTGGATGAGCATCT---AGGGAGGCCCCAGGTGCAGACAGGAGGAGAGGCAGCGTAGGAGGTGGGCAGCTCC-CCCAGCCCACAGCTCCCTTCCTTCCCCTGGGCCCCACGCCATTGC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75568313 152 - 121768101 CCATGTAGCTTCCCTGAAAGGTTTCTCCAT-GTGCTGTGGATGAACCTCTAGGAGGGAGGCCCCAGGTGTAGACAGGATGAGAGGCAGCACGGAAGGTAGGTGGCTCC-CCCAGCCCACAGCTCCCTTCCGTCCCCTGGGCCCAGCACCATTGC i calJac3.chr12 C 0 C 0 s canFam3.chr4 27727999 128 + 88276631 ACATGTGGTTTCACTGCAAGGCCTTTCCACTTTGCCCTGGACGACCATCT------------CCGGATGAGGACCGGAGGGGAGACACGACAG------GCCAGCACTGACCACTGGGCAGCTCCTACCCTCTCC-------CCCCGCGGTTA- i canFam3.chr4 I 325 C 0 e mm10.chr14 24172337 869 + 124902244 I a score=272335.000000 s hg38.chr10_KI270825v1_alt 76193 116 + 188315 TGGTATCCAAAATGAATTCATCCCCAAAATACTGCTTCCTTATAAGGAATACAAGAAGTACTATACTTAGTTTTAGTGAGAGGGG--------------AGAGGGAAATGAGGTACC-TTAAACAAATGGT s panTro4.chr10 76453768 116 + 133524379 TGGTCTCCAAAATGAATTCATCCCCAAAATACTGCTTCCTTATAAGGAATACAAGAAGTACTATACTTAGTTTTAGTGAGAGGGG--------------AGAGGGAAATGAGGTACC-TTAAACAAATGGT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76116753 116 - 133410057 TGGTCTCCAAAATGAATTCATCTCCAAAATACTGCTTCCTTATAAGGAATACAAGAAGTACTATACTTAGTCTTAGTGACAGGGG--------------AGAGGGAAATGAGGTACC-TTAAAAAAATGGT i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73851362 117 - 130959383 TGGTCTCCAAAATGAATTCATCCCC-AAATACTGCTTCCTTATAAGGAATACAAGAAGTACTATACTTAGTTTTAGTGAAGGGGGA-------------AGAGGGGAAAGAGGTACCTTTAAAAAAATGGT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75412683 117 - 133195287 TGGTCTCCAAAATGAATTCATCCCC-AAATACTGCTTCCTTATAAGGAATACAAGAAGTACTATACTTAGTTTTAGTGAAGGGGGA-------------AGAGGGGAAAGAGGTACCTTTAAAAAAATGGT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73277198 114 - 125196307 TGGTCTCCAAAATGAATTCATCCCC-AAATACTGCTTCCTTATATGGAATAC---AAGTACTATACTTAGTTTtagtgaaggggga-------------agaggggaaagaggtacctttaaaaaaatggt i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72109521 117 - 125710982 TGGTCTCCAAAATGAATTCATCCCC-AAATACTGCTTCCTTGTAAGGAGTACAAGAAGTACTATACTTAGTTTTAGTGAAGGGGGA-------------AGAGGGGAAAGAGGTACCTTTAAAAAAATGGT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75568465 131 - 121768101 TGGTCTCCAACATGAATTCATCCCCAAAATACTGCTTCCTTATAAAGAACACAAGCCATACTATGGTTAGTTTTAGTGAGAGGAGAGAGGGAAGAGGGGAGAGCGGAATAAGGTACCTTAAAAGAAATGGT i calJac3.chr12 C 0 C 0 s canFam3.chr4 27728127 108 + 88276631 -GGTCTCCAAAATGAATTCACTCTCGGAACACTGCTTCCATATGAGGAACACGAGAAGTACGAGACCTCATTGTACCCACAGGGGA-------------GAAGAACGGTGAGGTATC-TGAAA-------- i canFam3.chr4 C 0 C 0 e mm10.chr14 24172337 869 + 124902244 I e nomLeu3.chr18 35057987 100 + 104879549 M a score=3118897.000000 s hg38.chr10_KI270825v1_alt 76309 1060 + 188315 AAAATTTGGAAGCCCAGAGGACCCAAGTGACGGACTGACTGATTC--TGATTACACTGGTGAGGAACCGCAGGATCTAGAAGTGACTCGCCAGGGCTCCCCCATCCTGCAGAGC-------TGATC-AGTACTGGCTCCTCTACCCCAGGCTGCCTC-------GGCATCAGATGTCAGTCTGAGTCTGCTCTAAAAGCGCCACCTGCAGTCTCTTTCTTCCTGTGCTGGGTGA-------ACAAAGGCGTGGGAAGAGATGGGCTAGTCTTCACAAGACACTTGCCAGACCCAGGCATGAGGCCAGTGAGAAAGGCCTATGGGCTGCAACCCAGCCCCAGAGGGCCAGAGCCCACTCGAGAGTCCCAGGGGAGGATGGGGCCCGAGTGTGGAGTGGTGCCCCTGAGCAGATGGCTCTCGGGTGAGGGCACCTCCCTCTGCTTCCTGGGAAGCTTCTCTTGCTACAACAGCCCTCTGCCTCTAAGTTCTGGAAAGGCCACTGCTGCCTTGCCTTGTC----------CCCTGGCACTG-TCCAGTCTATCCACCACAGCTGAGCTCAGCTCCTCAAGCAGGACCTGTAGCTGCATGTGTAACTGCATTCAGGGCAGCA-GACGGCAGGAGCATGGG--------------------GGGCTGCCCTTCTACAGACGGAACTCGGTGAGCA---GGGCCCGTCTAGGAAAGTGCGTTGGAACCTGGGAGATTTCTGCAACAGACAGCAGTGGCCTACAGCT-TCCAGTGGTGCCGACCTCAACTCCCCAGGCAGTTCCTCCCTCCTCCTGGGAGCAATGAGACTTCCCCGGACAAGGTCAGCTACTGGCCTGAGGCAGGAGGGCGGCCTTAGGGGAGCTCCCGAGGATATCTCTCCCCTGGGAGCTGGGAAGAAGAAGGCGAGGGAGGCAAGGGCACAGCCAACCT-GGCAAAGATCCTGACAGGCCCCCGGCCTCCCCATGCTACCTCTTTGCTCCCT-----------CTTTGCCTCAGCCCACTC---agaacacagaagggagagagggcatagagaaggaaaggggaaaatggagcaagacgtgcagatagaagacagaagCGTGCAAGCACGATGCCAGAAACTGAAGCC s panTro4.chr10 76453884 1067 + 133524379 AAAATTTGGAAGCCCAGAGGACCCAAGTGACGGACTGACTGATTC--TGATTACACTGGTGAGGAACCACAGGATCTAGAAGTGACTCGCCAGGGCTCCCCCATCCTGCAGAGCTGACTCGTGATC-AGTACCGGCTCCTCTACCCCAGGCTGCCTC-------GGCATCAGATGTCAGTCTGAGTCTGCTCTAAAAGCGCCACCTGCAGTCTCTTTCTTCCTGTGCTGGGTGA-------ACAAAGGCGTGGGAAGAGATGGGCTAGTCTTCACAAGACACTTGCCAGACCCAGGCATGAGGCCAGTGAGAAAAGCCTATGGGCTGCAACCCAGCCCCAGAGGGCCAGAGCCCACTCGAGGGTCCCAGGGGAGGATGGGGCCCGAGTGTGGAGTGGTGCCCCTGAGCAGATGGCTCTCGGGTGAGGGCACCTCCCTCTGCTTCCTGGGAAGCTTCTCTTGCTACAACAGCCCTCTGCCTCTAAGTTCTGGAAAGGCCACTGCTGCCTTGCCTTGTC----------CCCTGGCACTG-TCCAGTCTGTCCACCACAGCTGAGCTCAGCTCCTCAAGCAGGACCTGTAGCTGCATGTGTAACTGCATTCAGGGCAGCA-GACGGCAGGAGCATGGG--------------------GGGCTGCCCTTCTACAGACGGAACTCGGTGAGCA---GGGCCCGTCTAGGAAAGTGCGTTGGAACCTGGGAGATTTCTGCAACAGACAGCAGTGGCCTACAGCT-TCCAGTGGTGCCGACCTCAACTCCCCAGGCAGTTCCTCCCTCCTCCTGGGAGCAATGAGCCTTCCCCGGACAAGGTCAGCTACTGGCCTGAGGCAGGAGGGCGGCCTTAGGGGAGCTCCTGAGGATATCTCTCCCCTGGGAGCTGGGAAGAAGAAGGCGAGGGAGGCAAGGGCACAGCCAACCT-GGCAAAGATCCTGACAGGCCCCCGGCCTCCCCATGCTACCTCTTTGCTCCCT-----------CTTTGCCTCAGCCCACTC---AGAACACAGAAGGGAGAGAGGGCATAGAGAAGGAAAGGGGAAAATGGAGCAAGAGGTGCAGATAGAAGACAGAAGCGTGCAAGCATGATGCCAGAAACTGAAGCC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76116869 1078 - 133410057 AAAATTTGGAAGCCCAGAGGACCCAAGTGACGGACTGATTGATTC--TGATTACACTGGTGAGGAACTGCAGGATCTAGAAGTGACTCGCCAGGGCTCCCCCATCCTGCAGAGCTGACTCGTGATC-AGTACTGGCTCCTCTACCCCAGGCTGCCTC-------GGCATCAGATGTCAGTCTGAGTCTGCTCTAAAAGCGCCACCTGCAGTCTCTTTCTTCCTGTGCTGGGTGA-------ACAAAGGCGCAGGAAGAGATGGGCTGGTCTTCACAAGACACTTGCCAGACCCAGGCATGAGGCCAGTGAGAAAGGCCTATGGGCTGCAACCCAGTCCCAGAGGGCCACAGCCCACTCGAGGGTCCCAGGGGAAGATGGGGCCCGAGTGTGGAGTGGTGCCCCTGAGCAGACGGCTCTCGGGTGAGGGCACCTCCCTCTGCTTCCTGGGAAGCTTCTCTTGCTACAACAGCCCTCTGCCTCTAAGTTCTGGAAAGGCCACTGCTGCCTTGCCTTGTT----------CCCTGGCACTG-TCCAGTCTGTCCACCATAGCTGAGCTCAGCTCCTCAAGCAGGACCTATAGCTGCACGTGTAACTGCATTCAGGGCAGCA-GACGGCAGGAGCGTGGG--------------------GGGCTGCCCTTCTACAGACGGAGCTCGGTGAGCA---GGGCCCGTCTGGGAAAGTGCGTTGGAACCTGGGAGATTTCTGCAACAGACAGCAGTGGCCTACAGCT-TCCAGTGGTGCCGACCTCAACTCCCCAGGCAGTTCCTCCCTCCTCCTGGGAGCAATGAGCCTTCCCCGGACAAGGTCAGCTACTGGCCTGAGGCAGGAGGGCGGCCTTGGGGGAGATCCCGAGGATATCTCTCCCCTGGGAGCCGGGAGGAAGGAGGCGAGGGCGGCGAGGGCACAGCCAACCT-GGCAAAGACCCTAACAGGCCCCCGGCCTCCCCGTGCGAcctctttgctccctctttgctccccctttgcCTCAGCCCACTC---AGAACACAGAAGGGAGAGAGGGCATAGAGAAAGAAAGGGGAAAATGGAGCAAGAGGTGCAGATAGAAGACAGAAACGTGCAAGCACGATGCCAGAAACTGAAGCC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35058087 1057 + 104879549 AAAATTTGGAAGCCCAGAGGACCCAAGTGACCAACTGATTGATTC--TGATTACACTGGTGAGGAACTGCTGGATTTAGAAGTGACTCGCCAGGGCTCCCCCATCCTGCAGAGCTGACTCGTGATC-AGTACCGGCTCCTCTACCCCAGGCTGCCTC-------GGCATCAGATGTCAGTCTGAGTCTGCTCTAAAAGCGCCACCTGCAGTCTCTTTCTTTCTGTGCTGGGTGA-------ACAAAGGCATGGGAAGAGATGGGCTGGTCTTCACAAAACACTTGCCAGACCCAGGCATGACGCCGGTGAGAAAGGTCTGTGGGCTGCAACCCAGCCCCAGAGGGCCAGAGCACACTCGAGGGTCCCAGGGGAGGATGGGGCCCGAGTGTGGAGGGGTGCCCCTGAGCAGACGGCTCTCGGGTGAGGGCACCTCCCTCTGCTTCCTGGGCAGCTTCTCTTGCTATAACAGCC--CTGCCTCTAAGTTCTGGAAAGGCCACTGCTGCCTTGCCTTGTC----------CCCTGGCACTG-TCCAGTCTGTCCACCACAGCTGAGCTCAGCTCCTCAAGCAGGACCTGTAGCTAGACGTGTAACTGCATTCACGGCAGCA-GATGGCAGGAGTGTGGG--------------------GGGCTGCCCTTCTACAGACAGGGCTCGGTGAGCA---GGGCCCATCTGGGAAAGTGCGTTGGAACCTGGGAGATTTCTGCAACAGGCAGCAGTGGCCTACGGCT-TCCAGTGGTGCCAACCTCAACTCCCCAGGCAGTTC--GCCTCCTGCTGGGAGCAATGAGCCTTCCCCGGACAAGGTCAGCTCCTGGCCTGAGGCAGGAGGGCGGCCTTGGGGGAGCTCCCAAGGATATCTCCCCTCTGGGAGCCGGGAAGAAGGAGGCG---------AGGGCACAGCCAACCC-GGCAAAGACCCTGACAGGCCCCCGGCCTCCCCGTGCTACCTCTTTGCTCCCT-----------CTTTGCCCCAGCCCACTCAGAAGAACACAGAAGGGAGAGAGGGCATGGAGAAGGAAAGGGGAAAATGGAGCAAGAGGTGTAGACAGAAGACAGGGGCATGCAAGCACGACGCCAGAAACTGAAGCC i nomLeu3.chr18 M 100 M 1920 s rheMac3.chr9 73851479 1047 - 130959383 AAAATTTGGAAGCCCAGCAGACCCAAATGACCGACTGATTGATTC--TGATCACACTGGTGAGGAACCGCAGGATCTAGAAGTGACTCACCAGGGCTCCCCCATCCTGCAGAGCTGACTCATGATC-AGTACCGGCTCCTCTACCCCAGGCAGACTCTACCCCAGGCATCAGATGTCAGTCTGAGTCTGCTCTAAAAGCGCCACCTGCAGTCTCTTTCTTCCAGTGCTGGGTGA-------GCAAAGGCGTGGGAAGAGATGGGCCGGTCTTCACGAGACACTTGCCAGACCCAGCCATGAGGCCGGTGAGAAAGGCCCATGGGCTGCAACCCAGCCCCAGAGGGCCAGAGCCCACTCGAGGGTCCCAGGGGAGGATGGGGCCCAAGTGTGGAGTGGTGCCCCTGAGCAGACGGCTCTCAGGTGAGGGCACCTCCCTCTGCTTCCTGGGCAGCTTCTCTTGCTACAACAGCCCTCTGCATCTAAGTTCTGGAAAGGCCAGTGCTGCCTCACCTTGTC----------CCCTGGCACTG-TCCAGTCTGTCCACCACAGCTGAGCTCAGCTCCTCAACCAGGACCTGTAGCTGGACGTGAAACTGCATTCAGGGCGGCA-GACGGCAGGAGCGTGGG--------------------GGGCTGCCCTTCTACAGACAGGGTTCGGTGAGCA---GGGCCCTTCTGGGAAAGTGCTTTGGAACCTGGGAGATCTCTGCAATAGGCAGCAGTGACCTACGGCT-TCCAGTGGTGCCAACCTCAACTCCCCAGGCAGTTCCTCCCTCCTCCTGGGAGCAATGAGCCTTCGCTGGACAAGGTCAGCTCCTGGCCTGAGGCAGGAGGGTGGCCTTGGGGGAGCTCCTGAGGATATCTCCCCTCTGGGAGCTGGTAAGGAGGTG------------AGGGCACAGCCAACCT-GTCAAAGACCCTGACAGGCCCCTGGCCTCCCGGTGCT--------------------------CTTTGCCTCAGCCCACTC---AGAACACAGAAGGGAGAGAGGGCATGGAGAAGGAAAAGGGAAAATGGAGCAAGAGGTGCAGATAGACGACAGGGGCATGCAAGCACGACACCAGAAACTGAAGCC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75412800 1021 - 133195287 AAAATTTGGAAGCCCAGCAGACCCAAGTGACCGACTGATTGATTC--TGATCACACTGGTGAGGAACCGCAGGATCTAGAAGTGACT--------------------------CTGACTCATGATC-AGTACCGGCTCCTCTACCCCAGGCAGACTCTACCCCAGGCATCAGATGTCAGTCTGAGTCTGCTCTAAAAGCGCCACCTGCAGTCTCTTTCTTCCAGTGCTGGGTGA-------GCAAAGGCGTGGGAAGAGATGGGCCGGTCTTCACAAGACACTTGCCAGACCCAGCCATGAGGCCGGTGAGAAAGGCCCATGGGCTGCAACCCAGCCCCAGAGGGCCAGAGCCCACTCGAGGGTCCCAGGGGAGGATGGGGCCCAAGTGTGGAGTGGTGCCCCTGAGCAGACGGCTCTCAGGTGAGGGCACCTCCCTCTGCTTCCTGGGCAGCTTCTCTTGCTACAACAGCCCTCTGCATCTAAGTTCTGGAAAGGCCAGTGCTGCCTCACCTTGTC----------CCCTGGCACTG-TCCAGTCTGTCCACCACAGCTGAGCTCAGCTCCTCAACCAGGACCTGTAGCTGGACGTGAAACTGCATTCAGGGCGGCA-GACGGCAGGAGCGTGGG--------------------GGGCTGCCCTTCTACAGACAGGGTTCGGTGAGCA---GGGCCCTTCTGGGAAAGTGCTTTGGAACCTGGGAGATCTCTGCAATAGGCAGCAGTGACCTACGGCT-TCCAGTGGTGCCAACCTCAACTCCCCAGGCAGTTCCTCCCTCCTCCTGGGAGCAATGAGCCTTCGCTGGACAAGGTCAGCTCCTGGCCTGAGGCAGGAGGGTGGCCTTGGGGGAGCTCCTGAGGATATCTCCCCTCTGGGAGCTGGTAAGGAGGTG------------AGGGCACAGCCAACCT-GTCAAAGACCCTGACAGGCCCCTGGCCTTCCCGTGCT--------------------------CTTTGCCTCAGCCCACTC---AGAACACAGAAGGGAGAGAGGGCATGGAGAAGGAAAAGGGAAAATGGAGCAAGAGGTGCAGATAGACGACAGGGGCATGCAAGCACGACACCAGAAACTGAAGCC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73277312 1050 - 125196307 aaaatttggAAGCCCAGCAGACCCAAGTGACCGACTGATTGATTC--TGATCACACTGGTGAGGAACCGCAGGATCTAGAAGTGACTCACCAGGGCTCCCCCATCCTGCAGAGCTGACTCATGATC-AGTACCGGCTCCTCTACCCCAGGCAGACTCTACCCCAGGCATCAGATGTCAGTCTGAGTCTGCTCTAAAAGCGCCACCTGCAGTCTCTTTCTTCCAGTGCTGGGTGA-------GCAAAGGCGTGGGAAGAGATGGGCCGGTCTTCACAAGACACTTGCCAGACCCAGCCATGAGGCCGGTGAGAAAGGCCCATGGGCTACAACCCAGCCCCAGAGGGCCAGAGCCCACTCGAGGGTCCCAGGGGAGGATGGGGCCCAAGTGTGGAGTGGTGCCCCTGAGCAGACGGCTCTCAGGTGAGGGCAcctccctctgcttcctgggcagCTTCTCTTGCTACAACAGCCCTCTGCATCTAAGTTCTGGAAAGGCCAGTGCTGCCTCACCTTGTC----------CCCTGGCACTG-TCCAGTCTGTCCACCACAGCTGAGCTCAGCTCCTCAACTAGGACCTGTAGCTGGACATGAAACTGCATTCAGGGCAGCA-GACGGCAGGAGCTTGGG--------------------GGGCTGCCCTTCTACAGACAGGGTTCGGTGAGCA---GGGCCCGTCTGGGAAAGTGTGTTGGAACCTGGGAGATCTCTGCAATAGGCAGCAGTGACGTACGGCT-TCCAGTGGTGCCAACCTCAACTCCCCAGGCAGTTCCTCCCTCCTCTTGGGAGCAATGAGCCTTCGCTGGACAAGGTCAGCTCctggcctgaggcaggagggtggccTTGGGGGAGCTCCTGAGGATATCTCCCCTCTGGGAGCTGGTAAGGAGGTG------------AGGGCACAGCCAACCT-GTCAAAGACCCTGACAGGCCCCTGGCCTCCCGGTGCT--------------------------CTTCGCCTCAGCCCACTCAGAAGAACACAGAAGGGAGAGAGGGCatggagaaggaaaagggaaaatggaGCAAGGGGTGCAGATAGAAGACAGGGGCATGCAAGCACAACACCAGAAACTGAAGCC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72109638 1050 - 125710982 AAAATTTGGAAGCCCAGCAGACCCAAGTGACCAACTGATTGATTC--TGATCACACTGGTGAGGAACCGCAGGGTCTAGAAGTGACTCACCAGGGCTCCCCCATCCTGCAGAGCTGACTCATGATC-AGTACCGGCTCCTCTACCCCAGGCAGACTCTACCCCAGGCATCAGATGTCAGTCTGAGTCTGCTCTAAAAGCGCCACCTGCAGTCTCTTTCTTCCAGTGCTGGGTGA-------GCAAAGGTGTGGGAAGAGATGGACCGGTCTTCACAAGACACTTGCCAGACCCAGCCATGAGGCCAGTGAGAAAGGCCCATGGGCTGCAACCCAGCCCCAGAGGGCCAGAGCCCACTCGAGGGTCCCAGGGAAGGATGGGGCCCAAGTGTGGAGTGGTGCCCCTGAGCAGACGGCTCTCAGGTGAGGGCACCTCCCTCTGCTTCCTGGGCAGCTTATCTTGCTACAACAGCCCTCTGCATCTAAGTTCTGGAAAGGCCAGTGCTGCCTCACCTTGTC----------CCCTGGCACTG-TCCAGTCTGTCCACCACAGCTGAGCTCAGCTCCTCAACCAGGACCTGTAGCTGGACGTGAAACTGCATCCAGGGCAGCA-GACGGCAGGAGCGTGGG--------------------GGGCTGCCCTTCTACAGACAGGGTTCGGTGAGCA---GGGCCCGTCTGGGAAAGTGCGTTGGAACCTGGGAGATCTCTGCAATAGGCAGCAGTGACCTATGGCT-TCCAGTGGTGCCAACCTCAACTCCCCAGGCAGTTCCTCCCTCCTCCTGGGAGCAATGAGCCTTCGCTGGACAAGGTCAGCTCCTGGCCTGAGGCAGGAGGGTGGCCTTGGGGGAGCTCCTGAGGATATCTCCCCTCTGGGAGCTGGTAAGGAGGTG------------AGGGCACAGCCAACCT-GTCAAAGACCCTGACAGGCCCCTGGCCTCCCGGTGCT--------------------------CTTTGCCTCAGCCCACTCAGAAGAACACAGAAGGGAGAGAGGGCATGGAGAAGGAAAAGGGAAAATGGAGCAAGAGGTGCAGATAGAAGACAGGGGCATGCAAGCACAACACCAGAAACTGAAGCC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75568596 1071 - 121768101 AAAATTTGGAAGCCCAGAGGACCCAAGTAACCCACTGATTGATTC--TGACTACACTGGTGAGGAACCGCAGGATCTAGAAGTGACTTGCCAGGGCT-CCCCATCCTGCAGAGCTGACTCATGATCTAGTACCAGCTCCTCTACTCCAGGCTGCCTC-------AGCATCAGATATCAGTCTGACTCTGCTCT-AAAGCACCACCTGCGGTCTCCTTCTACCTGCGCTGAATGG-------GCACAGGCATGGGAAGAGATGGGCTGGTCTTCACAAGATACTCGCCCAACCCAGGCATGGGGCCAGTGAGAAAGGCCTATGGGCTGCAACTTAGCTCCAGAGGGCCAGAGCCCACTCCAGGGTCCCAGGGGAGGGTGGGGTCCAGGTGCAGAGCGGTGACCCTGAGCAGATGGCTCTCGGGTGAGGGCACCTGCCTCTGCGTCCTGGGCAGCTTCTCCTGCTGCAGCAGCCCTCTGCCTCTAAGTTCTGGAAAGGCAACTGCTGCCTCACCTTGTC----------CCCTGGAGCTG-TCCAGTCTGTCCACCACAGCTGAGCTCAG---CTCAAGCAGGACCTGTAGCTGGATGTGTAACTGCATTCAGGGCAGCA-GACAGCAGGAGTGTGTGGCTGTGGCTGGCCAGTGACAGGGCTGCCCTTCTATGGATGGGCCTCGGTCAGCA---GGGCCCATCTGGGAAAGTGTGCTGGAAACTGGAAGATCTCTGTGACAGGCAGTGGTGGCCCACTGCT-ATTGGTGGTGCCAACCTTGACTCCCCAGG--GTTCCTCCCTCC---TGGGAGCAATGAGCCTTTGCCAGAAAAGGTCAGCTCCTAACCTGAGGCAGGAGGGTGGCCTTGAAGGAGCTCCCGAGGACATCTTCCCTCTAGGATCTGGGAGACAAGAGGCA---------AGGGCACAGCCAACCT-GGCGAAGAGCCTGACAGGCCCCTGGCCTCCCGGTGCT-ACCATCTGCTCCCT-----------CTTTGCCTCAGCCCACAAAGAAGAACACAGAAGTGGGAGAAGGCATTGAGGAGAAAAGGGGAAAATGGAGAAAGAGGTGCAGATAGAAGACAGAAGTGTACAAGTACAATGCCAGAAATTGAAGCC i calJac3.chr12 C 0 C 0 s canFam3.chr4 27728235 820 + 88276631 ------------------GGACCC---------TCGGTGTGATCCCGTGCTAACACTGACGAGGATGCTCGGGGCCCAG----GAAGCGCCAGGCCCCCC---------------------------AGG------CCCTCTACACTGTGCTTTCTC-----------CCAGCCGCCGGTCTTCACCTGC---AAGGGCACCACCCGAGACCTCCTTCT---GGCCCTGGGTGACCTGGGGCCACAGGCTCGGGACAAGAGGGACTGGTTTTCCCGAGTCACTCACTCGGCCCAGGCACAAAGCCCACAAGCCAGACC-----------------CCACGGAGG---------CACGCGGGGGTGCTGGGAGAGGA------------------AGGTGCTCCTGAGCGACCTG---------------ACCCGTGGCTCCCACCTGGGGGGCGGCTCATA---------------GCCTCCGAGCTCTCAGAAGGCCG----TCCTTCGCCCCGACAGCACCTCCTCCCTCACACGGCTCCACTCTGGCCCTCGGGCCCGAGCTCAGCGCCACCGACCGCACAGGACATCAGAGCCACAGCTGCCTCAGGGGCGGCAGGAAGGCAAGGACAGGGG--------------------GAGCCCTCC--------------CTGAGCGAGCACACTGGCCTTCCTACGGGCGGACG--GGAGCTCGG--GCTCTTGTCACCTGGC------GGGCCCCGGCTCCCCAGCAGTGGAGACC--AGCCGGCCGGGCAGTTCCTGTGCCC----AGGGGCCGTGA--------CGG--------------TGGCCCGCGAC-----------------GGAGCTCCTGTAGACGTGCCCGTTCAGGGGG--GGACTCAGGGAG------------AGGGCACAGCCGGGCTGGGCCAGGACGCAGACGGGCCCCCGAAGCCCT--------------------------------CTTCGCCACAGCGCACTCCAgagaagagggcagtgagaggggagagagagggggccacaggggaggggag---gggGCAGAGAACAGAGTCTGTGGGAAGAAAGGGCA------------------ i canFam3.chr4 C 0 C 0 e mm10.chr14 24172337 869 + 124902244 I a score=72089.000000 s hg38.chr10_KI270825v1_alt 77369 30 + 188315 -CAGCCCTCGGGCTGAGCAAGATGAAGATGG s panTro4.chr10 76454951 30 + 133524379 -CAGCCCTCGGGCTGAGCAAGATGAAGATGG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76117947 30 - 133410057 -CAGCCCTCGGGCTGAGCAGGATGAAGATGG i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73852526 30 - 130959383 -CAGCCCTCGGGCTGAGCAGGATGAAGACAG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75413821 30 - 133195287 -CAGCCCTCGGGCTGAGCAGGATGAAGACAG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73278362 30 - 125196307 -CAGCCCTCGGGCTGAGCAGGATGAAGACAG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72110688 30 - 125710982 -CAGCCCTCGGGCTGAGCAGGATGAAGAGAG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75569667 30 - 121768101 -CTGCCCCCAGGATGAACAGAATGAAGACAG i calJac3.chr12 C 0 C 0 s canFam3.chr4 27729055 31 + 88276631 CCACCTCCGCCGCTGAGCGCAGTGAGCAGAG i canFam3.chr4 C 0 C 0 e mm10.chr14 24172337 869 + 124902244 I e nomLeu3.chr18 35059144 1920 + 104879549 M a score=951713.000000 s hg38.chr10_KI270825v1_alt 77399 361 + 188315 CTCTGCGGTGAGGGAGCTAGACCTGCCAGAAGGCCCCCCACAGCTGACCCCTGACAGGC-AGCAGCCAG---TGGGGTGGCGGG-------GCCAAT-CCCCAGGGTGCCTCACTGCCCA---CCCC----------TCCTGGTCTGCTCTTG-CCGGTGGAGAGTGCTCTCTTATCCATGAAGCCAGACCAACTTGA--GAAGGAGCTGAGGATTTCAGCTCTCAGAGCTGATG--GGGCAGCCGCGG------GGGCT---CTCTC---CTGCCTGCTGACTCGGAACAGGGCCTGGAAAAGATCCCTGCCTCAGCTGACAGGTGCACTTGATGCCCAGTCAACACCCCCTGTGGAGGAT--GGAGGCGGGCTCCAGGCTGA-----ATGGC--------TCGCC-TGAGTGCTGGG s panTro4.chr10 76454981 361 + 133524379 CTCTGCGGTGAGGGAGCTAGACCTGCCAGAAGGCCCCCCACAGCTGACCCCTGACAGGC-AGCAGCCAG---TGGGGTGGCGGG-------GCCAAT-CCCCAGGGTGCCTCACTGCCCA---CCCC----------TCCTGGCCTGCTCTTG-CCGGTGGAGAGTGCTCTCTTATCCATGAAGCCAGACCAACTTGA--GAAGGAGCTGAGGATTTCAGCTCTCAGAGCTGATG--GGGCAGCCACGG------GGGCT---CTCTC---CTGCCTGCTGACTCGGAACAGGGCCTGGAAAAGATCCCTGCCTCAGCTGACAGGTGCACTTGATGCCCAGTCAACACCCCCTGTGGAGGAT--GGAGGCGGGCTCCAGGCTGA-----ATGGC--------TCGCC-TGAGTGCTGGG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76117977 357 - 133410057 CTCTGCGGTGAGA----TAGACCTGCCAGAAGGCCCCCCACAGCTGACCCCTGACAGGC-AGCAGCCAG---TGGGGTGGCGGG-------GCCAAT-CCCCAGGGTGCCTCACTGCCCA---CCCC----------TCCTGGCCTGCTCTTG-CCGGTGGAGAGTGCTCTCTTATCGATGAAGCCAGACCAACTTGA--GAAGGAGCTGAGGATTTCAGCTCTCAAAGCTGATG--GGGCAGCAGCGG------GGGCT---CTCTC---CTGCCTGCTGACTCGGAACAGGGCCTGGAAAAGATCCCTGCCTCAGCTGACAGGTGCACTTGATGCCCAGCCAACACCCCCTGAGGAGGAT--GGAGGCGGGCTCCAGGCTGA-----AGGGC--------TCGCC-TGAGTGCTGGG i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73852556 358 - 130959383 CTCTGTGGTGAGGGAGCTAGACCTGCCAGAAGGCCCCCCACAGCTGACCCCTGACAGGC-AGCAGCCAG---TGGGGTGGCAGG-------GCCAAT-CCCCAGGGTGCCTCACTGCCCA---GCCC----------TCCTGGCCTGCTCTTG-CCGGTGGAGAGTG--CTCTTATTCATGAAGCCAGACCAACTTGA--GAAGGAAATGAGGATTTCAGCTCTTAGAGCTGAC---GGGTAGCAGCGG------GGGCT---ATCTC---CTGCCTGCTGACTCGGAACGGGGCCTGGAAAAGATCCCTGTCTCAGCTGACAGCTGCACTTGGTGCCCAGCCAATACCCCCTGTGGAGGCT--GGAGGCGGGCTCCAGGCTGA-----AGGGC--------TCGCC-TGAGTGCTGGG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75413851 358 - 133195287 CTCTGTGGTGAGGGAGCTAGACCTGCCAGAAGGCCCCCCACAGCTGACCCCTGACAGGC-AGCAGCCAG---TGGGGTGGCAGG-------GCCAAT-CCCCAGGGTGCCTCACTGCCCA---GCCC----------TCCTGGCCTGCTCTTG-CCGGTGGAGAGTG--CTCTTATTCATGAAGCCAGACCAACTTGA--GAAGGAAATGAGGATTTCAGCTCTTAGAGCTGAC---GGGCAGCAGCGG------GGGCT---ATCTC---CTGCCTGCTGACTCGGAACGGGGCCTGGAAAAGATCCCTGTCTCAGCTGACAGCTGCACTTGGTGCCCAGCCAATACCCCCTGTGGAGGCT--GGAGGCGGGCTCCAGGCTGA-----AGGGC--------TCGCC-TGAGTGCTGGG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73278392 336 - 125196307 CTCTGTGGTGAGGGAGCTAGACCTGCCAGAAGGCCCCCCACAGCTGACCCCTGACAGGC-AGCAGCCAG---TGCGGTGGCGGG-------GCCAAT-CCCCAGGGTGCCTCACTGCCCA---CCCC----------TCCTGGCCTGCTCTTG-CCAGTGGAGAGTG--CTCTTATTCATGAAGCCAGACCAACTTGA--GAAG----------------------GAGCTGAC---GGGCAGCAGCGG------GGGCT---ATCTC---CTGCCTACTGACTCGGAACGGGGCCTGGAAAAGATCCCTGTCTCAGCTGACAGCTGCACTTGGTGCCCAGCCAATACCCCCTGTGGAGGCT--GGAGGCGGGCTCCAGGCTGA-----AGGGC--------TCGCC-TGAGTGCTGGG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72110718 359 - 125710982 CTCTGTGGTGAGGGAGTTAGACCTGCCAGAAGGCCCCCCACAGCTGACCCCTGACAGGC-AGCAGCCAG---TGGGGTGGCGGG-------GCCAAT-CCCCAGGGTGCCTCACTGCCCA---CCCC----------TCCTGGCCTGCTCTTG-CCGGTGGAGAGTG--CTCTTATTCATGAAGCCAGACCAACTTGA--GAAGGAGCTGAGGATTTCAGCTCTTAGAGCTGAC---GGGCAGCAGCGG------GGGCT---ATCTC---CTGCCTGCTGACTCGGAACGGGGCCTGGAAAAGATCCCTGTCTCAGCTGACAGCTGTACTTGGTGCCCAGCCAATACCCCCTGTGGAGGCT--GGAGGCGGGCTCCAGGCTGA-----AGGGC--------TCGCCTTGAGTGCTGGG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75569697 363 - 121768101 CTCTGCAGTGAGGGAGCTGGACCTGCCAGAAGGCCCCCCACAGCTGACCCCCGACAGGC-AGCAGCCAG---TGGGGTGGGGGG-------GTCAATCCCCCAGGGTGCCTCACTACCCA---CCCC----------TCCTGGCCTGCTCTTG--CGGTGGAGAGTG--CTCTCGTACATGAAGCCAGACCAACTTGA--GAAGGAACTGAGGATTTCAGCTCTCAGAGCTGCTG--GGGCAGCAGT-G------GGGCT---CTCTC---GAGCCTGCTGACTCGGAACGAGGCCTGGAAAAGATCCCTGCCTCAGCTGATAGGTGCACTTGATGCCCAGCCAACACCCCCTGCAGAGGCT--GGAGACAGGCTCCAGGTTGAAGGGCAGGGC--------TCGCC-TGAGTGCTGGG i calJac3.chr12 C 0 C 0 s mm10.chr14 24173206 366 + 124902244 CTCCATGGTCAGGGAACCAGGTGAAGCAGAGG--CCTACCCAGCTGACCCTGGACAGGTGACCAAACAT---TGTGGT-----A-------ATCATC-CCCTAGAG----CCACATTCCA---CCTAAGAAGCACAGGTCTAGCTTCCTCTTGGCTAGCATCAGGTC------CGGGTATGAACCCAGAACATCGTGC--AGCGGGGTTG------TCAGCTCT----GGTGACAGCAGGCAGGAGTGGAGCCACAGGCT---CTCCCCTGCTGCCTGCTGATTCAGAACAATGCCTGGAAAAGATTCCTGCCTCAGCTGACAAGC-CACCTGTCACTCAGCCAGCACCCCCTGCATAGCCTCAGAGGACTGACTCCACACTAA-----AGGGCATGCCTGACTGCC-TGAGTGCTGAG i mm10.chr14 I 869 C 0 s canFam3.chr4 27729086 340 + 88276631 TCCTGCGATCAGGGAGGCAG--CGGGCCCCAGGCCGGCCTCCACGGACCCC-----AGC-ACCGGCCGGGCCTGGGAGGGAAGGCGCTCCCACCACA-CCTCAGGG----CCGGAGGCCAAGGCCAC----------GACCGGCCTCCTCCGG-CAGGT-----GTG--CTC-TGTCTGAGCGGCCA----AACTCGGCCGCAGGAGCCGAGGGTTCCAGCTCTGGAAGGCGCC---GGGTGGGAGCGG------GGCTTCTCCTCTC---CAGCCTGCTGACTCGGAACAGTGCCTAGAAGAGATTCCTGCCTCGGCTGACAGGCACGCTTGACACCCAGCCAATGCCCCCTGCGAAGGCC-------CGGGAGCC------------AGGAC----------GCC--GAGTGCTGGG i canFam3.chr4 C 0 I 76 e nomLeu3.chr18 35059144 1920 + 104879549 M a score=418906.000000 s hg38.chr10_KI270825v1_alt 77760 187 + 188315 -----AATGC-GGTGGTTGCCGCAAGGACGTCAGGCCT--------GGAGGTCTCATTGCTGGACGCCAGCAC-------------CACAGGGAACTCAGGTGTTCTTTG----TGCATCTCTGTGCTTTCTATATTTCTACAAACAGTCTTCACGATTAACTTCAAAGATCTCAAAACTTggccaggcgcagtggttcaggcctgtaatcctagcac s panTro4.chr10 76455342 187 + 133524379 -----AATGC-GGTGGTTGCCGCAAGGACGTCAGGCCT--------GGAGGTCTCATTGCTGGACGCCAGCAC-------------CACAGGGAACTCAGGTGTTCTTTG----TGCATCTCTGTGCTTTCTATATTTCTACAAACACTCTTCACGATTAACTTCAAAGATCTCAAAACTTggccaggcgcagtggttcaggcctgtaatcctagcac i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76118334 183 - 133410057 -----AAAGC-AGTGGCTGCCACAAGGACATCAGGCCC--------GGAGGTCTCATTGCTGGACGCCAGCAC-------------CACAGGGAACTCAGGTGTTCTTTG----TGCATCTCTGTGCTTTCTACATTTCT----ACAGTCTTCATGATTAACTTCGAAGATCTCAAAACTTggccaggcacagtggctcaggcctataatcctagcac i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73852914 187 - 130959383 -----AAGGC-GACGGCTGCCCCAAGGACGTCAGGCCT--------GGGGGTCTCATTGCTGGATGCCAGCAC-------------CGCGGGGAACTCAGGTGTTCTCTG----TACATCTCTGTGCTTTCTACATTTCTACAAAGAGTCTTCACCATTAACTTCAAAGATCTCAAAATATggccaggcgcagtggctcaggcctgtaatcctagcat i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75414209 187 - 133195287 -----AAGGC-GACGGCTGCCCCAAGGACGTCAGGCCT--------GGGGGTCTCATTGCTGGATGCCAGCAC-------------CGCGGGGAACTCAGGTGTTCTCTG----TACATCTCTGTGCTTTCTACATTTCTACAAAGAGTCTTCACCATTAACTTCAAAGATCTCAAAATATggccaggcgcagtggctcaggcctgtaatcctagcat i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73278728 187 - 125196307 -----AAGGC-GACGGCTGCCCCAAGGACGTCAGGCCT--------GGGGGTCTCATTGCTGGATGCCAGCAC-------------CGCAGGGAACTCAGGTGTTCTCTG----TACATCTCTGTGCTTTCTACATTTCTACAAAGAGTCTTCACCATTAACTTCAAAGATCTcaaaatctggccaggcgcagtggctcaggcctgtaatcctagcat i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72111077 187 - 125710982 -----AAGGC-GACGGCTGCCCCAAGGACGTCAGGCCT--------GGGGGTCTCATTGCTGGATGCCAGCAC-------------CGCAGGGAACTCAGGTATTCTCTG----TACATCTCTGTGCTTTCTACATTTCTACAAAGAGCCTTCACCATTAACTTCAAAGATCTCAAAATTTGCccaggcgcagtggctcaggcctgtaatcctagcat i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75570060 165 - 121768101 -----A-----------------------GTCAGGCCT--------GGGTGTCTCATTACAGGACACCGGCAC-------------CATGGGGAACTCAGGTGCTCTTTG----TACTTTCCTGTGCTTTCTACATTTCTACAAAGAGTCTTCACGATTAACTTCAAAGATCTCAAAACTGggccaggtgcagtgcctccggcctgtaatcctagtac i calJac3.chr12 C 0 C 0 s mm10.chr14 24173572 199 + 124902244 TACCAAGGGCTGAGAGCTGAGGCTCAGACGTCAAGCCTCCACATTAATGGTGCTCACTGCTGGAGGCCAGCACGTGGCCGGGGGAGGAGGGGGGTCCTGGGTGTTCTTCATACTTACTTCTCTGTG-----TACATGACCACAA----CCTACACTGATAACTTCAGGAATTTGGAA----------GCCCCATGGAGCAGGCTTGCTGTCTTATCAC i mm10.chr14 C 0 I 908 e canFam3.chr4 27729426 76 + 88276631 I e nomLeu3.chr18 35059144 1920 + 104879549 M a score=383782.000000 s hg38.chr10_KI270825v1_alt 77947 175 + 188315 tttgggaggccaaggtgggtggatcacctgaggtcaggaattcgagactagcctggccaacagagcgaaaccccgtctctactaaaaatacaaaaattagctgggcgtactggcaagtgtctataatcccagctactcaggaggctgaggcaagaggatcgctggaacccgg---cag--- s panTro4.chr10 76455529 175 + 133524379 tttgggaggccaaggtgggtagatcacctgaggtcaggaattcgagactagcctggccaacagagcgaaaccccgtctctactaaaaatacaaaaattagctgggcgtactggcaggtgtctataatcccagctactcaggaggctgaggcaagaggatcgctggaacccgg---cag--- i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76118517 175 - 133410057 tttgggaggccaaggtgggtggatcacctgagctcaggaattcgagactagcctggccaacagggtgaaaccccgtctctaataaaaatacaaaaattagctgggcgtactggcaggtgtctataatcccagctactcgggaggctgaggcaacaggatcgctggaacccgg---cag--- i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73853101 175 - 130959383 gttgggaggccaaggtgggtggatcacctgaggtcaggagttcaagaccagcctggccaacatggcgaaaccccatctctactaaaagtacaaaaattagctgggcatacttgcaggtgtctataatcccagctactcaggaggctgagacaggaggatcactggaacccaa---cag--- i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75414396 175 - 133195287 gttgggaggccaaggtgggtggatcacctgaggtcaggagttcaagaccagcctggccaacatggcgaaaccccatctctactaaaaatacaaaaattagctgggcgtactggcaggtgtctataatcccagctactcaggaggctgagacaggaggatcactggaacccaa---cag--- i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73278915 175 - 125196307 gttgggaggccaaggtgggtggatcacctgaggtcaggagttcaagaccagcctggccaacatggcgaaaccccgtctctactaaaaatacaaaaattagctgggcgtactggcaggtgtctataatcccagctactcaggaggctgagacaggaggatcgctggaacccaa---cgg--- i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72111264 175 - 125710982 gttgggaggccaaggtgggtggatcacctgaggtcaggagttcaagaccagcctggccaacatggcgaaaccccatctctactaaaaatacaaaaattagctgggcgtactggcaggtgtctataatcccagctactcaggaggctgagacaggaggatcgctggaacccaa---cag--- i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75570225 166 - 121768101 tttgggag-------------gatcaactgaaattaggagttcaagactagtttggccaacatggtgaaaccccatctctaccaaaaacac--aagttagttggatgtagtggcaggtgtctataatcccatctactcgggaggctgaggcacaaggatcgctgggaatgggggtcaggcg i calJac3.chr12 C 0 C 0 e canFam3.chr4 27729426 76 + 88276631 I e mm10.chr14 24173771 908 + 124902244 I e nomLeu3.chr18 35059144 1920 + 104879549 M a score=371224.000000 s hg38.chr10_KI270825v1_alt 78122 139 + 188315 gtggaggttgtagtgagccgagatcgtgccacttcactccagcctgggcaaaagagggaaaccacatctc---------aaaaaaagaaagaaagaaaaaagaaaaTCTCAAAACTCCATCCACACGGGCTCGCTGTTATTCCCCAGG s panTro4.chr10 76455704 139 + 133524379 gtggaggttgttgtgagccgagatcgtgccacttcactccagcctgggcaaaagagggaaaccacatctc---------aaaaaaagaaagaaagaaaaaagaaaaTCTCAAAACTCCATCCACACGGGCTCACTGTTATTCCCCAGG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76118692 140 - 133410057 gtggaggttgtagtgagccgagatcgtgccacttcactccagcctgggcaaaagagggaaactgcatctc--------aaaaaaaaaaaagaaagaaaaaagaaaaTCTCAAAACTCCATCCACACTGGCTCGCTGTCATTCCCCAGG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35061064 132 + 104879549 gtggaggtt-tagtgagcagagatagtgccacttcactccagcctgggcaaaagagggttcccccttttg---------------tcaaaaaaagaaaaaagaaaaTCTCAAAACTCCATCCACACGGGCTCACTGTCATTCCCCAGG i nomLeu3.chr18 M 1920 C 0 s rheMac3.chr9 73853276 147 - 130959383 gtggaggttatagtgagttgagatcgtgccacttcactccagcctgggaaaaagagggaaagtaagttta-aaaaaaaaaaagaaagaaagaaagaaaaaaGAAAATCTCAAAACTCCATCCGCACGGGCTCGCTGTCATTCCCCAGG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75414571 147 - 133195287 gtggaggttatagtgagttgagatcgtgccacttcactccagcctgggaaaaagagggaaagtacgtttc-aaaaaaaaaaaaaaagaaagaaagaaaaaaGAAAATCTCAAAACTCCATCCGCACGGGCTCGCTGTCATTCCCCAGG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73279090 147 - 125196307 gtggaggttatagtgagttgagatcgtgccacttcactccagcctgggaaaaagagggaaagtatgtttc-aaaaaaaaaaagaaagaaagaaagaaaaaagaaaatctcaaaactCCATCCGCACGGGCTCGCTGTCATTCCCCAGG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72111439 148 - 125710982 gtggaggttatagtgagttgagatcgtgccacttcactccagcctgggaaaaagagggaaagtacgtttcaaaaaaaaaaaagaaagaaagaaagaaaaaAGAAAATCTCAAAACTCCATCCGCACAGGCTCGCTGTCATTCCCCAGG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75570391 129 - 121768101 gcggaggctgcagtgagctgagatcgtgccacttcactctagcctgggcaaaagagagaaactctatctc-------------------gaaaaaaagaaagaaaGTCTCAAAACTCCATCCACGCAGGCTCACTGTCGCTCCCCAGG i calJac3.chr12 C 0 C 0 e canFam3.chr4 27729426 76 + 88276631 I e mm10.chr14 24173771 908 + 124902244 I a score=1319218.000000 s hg38.chr10_KI270825v1_alt 78261 411 + 188315 CGTGTGTCTGACATTCTGT--GACATTTCAGAGCAGTTACTGACTCGGTCATTTTCCAAGTTTCCTTCTTCATCATTTTGTTTTCCTTATTTGATATTGACATTTT-CCCCAAAAAATTATGTGCTCAGATACCAG-GATGTGAACATGAGTTCACGGTTTTTCTAGGATGATTACCAAATTCTAATGCATTATCTTTACTTATTAAAAATTTATT---CTAATAAGCTTTTCAAAAATTTCATTGCAGTAAATATTTCTCTTCACACTGGCTTTTGCCTCAAGGGTCTGGAGAAGTCTTGGTGGTTCCTTGTATGAAATTCCCATTACTTGGCTGGCCCATTTTTACCCACAGAAACAGTTTAATGAGGTTCACCCTAATCCTAA------CAGAGGAGTAAGATTCA---GACGGGCATAATAAT s panTro4.chr10 76455843 411 + 133524379 CGTGTGTCTGACATTCTGT--GACATTTCAGAGCAGTTACTGACTCGGTCATTTTCCAAGTTTCCTTCTTCATCATTTTGTTTTCCTTATTTGATATTGACATTTT-CCCCCAAAAATTATGTGCTCAGATACCAG-GATGTGAACATGAGTTCACGGTTTTTCTAGGATGATTACCAAATTCTAATGCATTATCTTTACTTATTAAAAATTTATT---CTAATAGGCTTTTCAAAAATTTCATTGCAGTAAATATTTCTCTTCACACTGGCTTTTGCCTCAAGGGTCTGGAGAAGTCTTGGTGGTTCCTTGTATGAAATTCCCATTACTTGGCTGGCCCATTTTTACCCACAGAAGCAGTTTAATGAGGTTCACCCTAATCCTAA------CAGAGTAGTAAGATTCA---GACGGGCATAATAAT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76118832 411 - 133410057 CGTGTGTCTGACATTCTGT--GACATTTCAGAGCAGTTACTGACTTGGTCATTTTCCAAGTTTCCTTCTTCATCATTTTGTTTTCCTTATTTGATATTGACATTTTCCCCCCAACAATTATGTGCTCAGATACCAG-GATGTGAACATGAGTTCATGGTTTTTCTAGGATGATTACCAAGTTCTAATGCATTATCTTTACTTA-TAAAAATTTATT---CTAATAGGCTTTTCAAAAATTTCATTGCAGTAAATATTTCTCTTCACACTGGCTTTTGCCTCAAGGGTCTGGAGAAGTCTTGGTGGTTCCCTGCATGAAATTCTCATTACTTGGTTGGCCCATTTTTACCCACAGAAACAGTTTAATGAGGTTCACCCTAATCCTAA------CAGAGTAGTAAGATTCA---GATGGGCATAATAAT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35061196 411 + 104879549 CATGTGCCTGACATTCTGT--GACATTTCAGAGCAGTTACTGACTCGGTCATTTTCCAAGTTTCCTTCTTCATCATTTTGTTTTCCTTATTTGATATTGACATTTT-CCCCCAACAATTATGTGCTCAGATACCAG-GATGTGAACATGAGTTCATGGTTTTTCTAGGATGATTACCAAGTTCTAATGCATTATCTTTACTTATTAAAAATTTATT---CTAACAGACTTTTCAAAAATTTCATTGCAGTAAATACTTCTCTTCACACTGGCTTTTGCCTCAAGGGTCTGGAGAAGTCTGGGTGGTTCCTTGTATGAAATTCCCATTACTTGGTTGGCCCATTTTTACCCACAGAAACAGTTTAATGAGGTTCACCCTAATCCTAA------CAGAGTAGTAAGATTCA---GATGGGCATAATAAT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73853423 411 - 130959383 CATGTGTCTGATATTCTGT--GACATTTCACAGCAGTTACTGACTTGGTCATTTTCCAAGTTTCCATCTTCATCATTTTGTTTTCCTGATTTGATATTGACATTTT-CCCCCAACAATTATGTGCTCAGATCCCAG-GATGTGAACATGAATTCATGGTTTTTCTAGGATGATTACCAAGTTCTAATGCATTATCTTCACTTACTAAAAATTTATT---CTAATAGACTTTTCAAAAATTTCATTGCAGTAAATATTCATCTTCACACTGGCTTTTGCCTCAAGGGTCTCCAGAAGTCTTGGTGGTTCCTTGTACGAAATTCCCATTACTTGGTTGGCCCATTTTTACCCAAAGAAACAGTTTAATGAGGTTCACCCTAATTCTAA------CAGAGTAGTAAGATTCA---GATGGGCATAATAAT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75414718 411 - 133195287 CATGTGTCTGATATTCTGT--GACATTTCACAGCAGTTACTGACTTGGTCATTTTCCAAGTTTCCATCTTCATCATTTTGTTTTCCTGATTTGATATTGACATTTT-CCCCCAACAATTATGTGCTCAGATCCCAG-GATGTGAACATGAATTCATGGTTTTTCTAGGATGATTACCAAGTTCTAATGCATTATCTTCACTTACTAAAAATTTATT---CTAATAGACTTTTCAAAAATTTCATTGCAGTAAATATTCATCTTCACACTGGCTTTTGCCTCAAGGGTCTCCAGAAGTCTTGGTGGTTCCTTGTACGAAATTCCCATTACTTGGTTGGCCCATTTTTACCCAAAGAAACAGTTTAATGAGGTTCACCCTAATCCTAA------CAGAGTAGTAAGATTCA---GATGGGCATAATAAT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73279237 408 - 125196307 CATGTGTCTGATATTC--T--GACATTTCACAGCAGTTACTGACTTGGTCATTTTCCAAGTTTCCATCttcatcattttgttttccttatttgatATTGACATTTT-CCCCCATCAATTATGTGCTCAGATCCCAG-GATGTGAACATGAGTTCATGGTTTTTCTAGGATGATTACCAAGTTCTAATGCATTATCTTcacttactaaatatttatt---ctaaTAGAC-TTTCAAAAATTTCATTGCAGTAAATATTCATCTTCACACTGGCTTTTGCCTCAAGGGTCTCCAGAAGTCTTGGTGGTTCCTTGTACGAAATTCCCATTACTTGGTTGGCCCATTTTTACCCAAAGAAACAGTTTAATGAGGTTCACCCTAATTCTAA------CAGAGTAGTAAGATTCA---GATGGGCATAATAAT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72111587 411 - 125710982 CATGTGTCTGATATTCTGT--GACATTTCACAGCAGTTACTGACTTGGTCATTTTCCAAGTTTCCATCTTCATCACTTTGTTTTCCTTATTTGATATTGACATTTT-CCCCCAACAATTATGTGCTCAGAAACCAG-GATGTGAACATGAGTTCATGGTTTTTCTAGGATGATTACCAAGTTCTAATGCATTATCTTCACTTACTAAAAATTTATT---CTAATAGACTTTTCAAAAATTTCATTGCAGTAAATATTCATCTTCACACTGGCTTTTGCCTCAAGGGTCTCCAGAAGTCTTAGTGGTTCCTTGTATGAAATTCCCATTACTTGGTTGGCCCATTTTTACCCAAAGAAACAGTTTAATGAGGTTCACCCTAATCCTAA------CAGAGTAGTAAGATTCA---GATGGGCATAATAAT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75570520 399 - 121768101 CATGTGTCTGACATTCTGT--GACATTTCAGAGCAGTTACTCAATCGGTC-TTTTCCAAGTTTCCTTCTTCATCATTGCGTTTTCCTTATCTGATATTGACCTTTT-CCTCCAACAATTATGTGCTTAGACACCAG-AACGTGAACATGAGTTCATGGTTTCTCCAGGATGATTACCAAGTTCTAATGCGTTACCTTTCCTTATTAGAAATTTATTCTCCTAACAGACTATTCAAAATTTGCATTGCAGTAAATAGTCCTCTTCACACTGGCTTTTGTCTCAGGGGTCTGGAGAAGTCTTGAGAGTTCCTTACATGAAATTCCCATTACTTGGTTGGCCCATTTTTACCCACAGAAACAGTTTACTGAGGTTAGCCCTAACCCCAATCCCATCTGAGTAGGGAG----------------------- i calJac3.chr12 C 0 C 0 s canFam3.chr4 27729502 391 + 88276631 CGCGGGTCACACGTTCTCCTGGACGGTTCCCTTTAGCGACTGACTCA----------AAGTTTGCTTCTTCACCGTTTTGTTTTTCTTATTTAGTAGCGACATTTT--CCCCAATAAT-------TCAGATACCAGCAATGTGAAAATGAGGGGATGGTTTCTCTAGGACAATGACCAAGTTCTAGTCCATGACCTTTGCTTATTAAAACCTCTCT---CATCATGCCCTTACAAAGGTTTCATCAAAGCAGGTAGTCCTTTTCATGA-GGCTTTCGCCTTCGAGGTCTGGAGAAGTCTCACT--CCCGTcatatgaaatcgctcttaa-----tggcccacttttgcctataaaaacaacttcctagggttcaCGCAGGTCCTAA------CAGGGCAGTAGGATCAGGATGATGGGCGTGATGAT i canFam3.chr4 I 76 I 58 e mm10.chr14 24173771 908 + 124902244 I a score=1176951.000000 s hg38.chr10_KI270825v1_alt 78672 384 + 188315 GAATGCCCATCTCAACTCACTGTTGCTTTGTGCAGGCACAATGATGTATTTTCTATATTGAATCATTTGTTCATCATGACCACCATTCCATTGTGCAAATGAAGAAACTAAGGCTggctgggtgcaggggctcacgcctgtaatcctagcactttgggaggctgaggcaggaggatcgcttgagcccaggagtttaagaccagcctgggcaacatagtgagaccgcatcactacaaaaaaattaagaattagctgggtgagctggtgctcgcctatagtcccagctactt-ggggggtctgaggtgggagcatcacttgagcccaagaggtcgagattacagtgagctatgattgtgccactgcactccagcctggggaacagag s panTro4.chr10 76456254 384 + 133524379 GAATGCCCATCTCAACTCACTGTTGCTTTGTGCAGGCACAATGATGTATTTTCTATATTGAATCATTTGTTCATCATGACCACCATTCCATTGTGCAAATGAAGAAACTGAGGCTggctgggtgcaggggctcacgcctgtaatcctagcactttgggaggctgaggcaggaggatcgcttgagcccaggagtttaagaccagcctgggcaacatagtgagaccgcatcactacaaaaaaattaagaattagctgggtgagctggtgctcgcctatagtcccagctactt-ggaggggctgaggtgggaggatcacttgagcccaagaggtcgagattacagtgagctatgattgtgccactgcactgcagcctggggaacagag i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76119243 377 - 133410057 GAATGTCCATCTCAACCCACTGTTGCTTTGTGCAGGCACAATGATGTATTTTCTATATTGAATCATTTGTTCATCATGACCACCATTCCATTGTGCAAATGAAGAAACTGAGGCTggctgggtgcaggggctcacgcctgtaatcccagcactttgggaggccgaggcaggaggatcgcttgagcccaggagtttgagacca------gcaacatagtgagactgcatcactacaaaaaaattaagaattagctgggtgagctggtgctcgcctatagtcccagctactt-gggggg-ctgaggtgggaggatcacttgagcccaagaggtcgagattacagtgagctatgattgtgccacggcactccagcctggggaacagag i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35061607 383 + 104879549 GAATGTCCATCTCAACTCACTGTTGATTTGTGCAGGCACAATGATGTATTTTCTATATTGAATCATTTGTTCATCACAACCACCATTCCATTGTGCAAATGAAGAAACTGAGGCTggctgggtgcaggggctcatgcccgtaatcccagcactttgggaggccgaggcaggaggatcacttgagcccaggagtttgagaccagcctgggcaacatagtgagaccacatcactacaaaaaaattaagaattagctgggtgagctggtgctcacctatagtcccagctactt-gggggg-ctgaggtgggaggatcacttgagcccaagaggtcgagattacagtgagctatgattgtgccactgcactccagcctggggaacagag i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73853834 383 - 130959383 GAATGCCCATCTCAACTCACTGttgctttgtgcaggcacgatgatgtattttctatattgaatcatttgttcattacaaccaccattccattgtgcagatgaagaaactgaggctggctgggtgcaggggctcacgcctgaaatcccagcactttgggaggccgaagcaggaggatcacttgagcccaggagtttgagaccagcctgggcaacatagtgagaccgcgtcactacaaaacaattcagaattagcggggtgtggtggtgcctgcatatagtcccagctactt-gggggg-ctgaggtgggaggatcacttgaacccaagaggtcgagattacagtgagctatgattgtgccactgcactccagcctggggaacagac i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75415129 383 - 133195287 GAATGCCCATCTCAACTCACTGttgctttgtgcaggcacgatgatgtattttctatattgaatcatttgttcattacaaccaccattccattgtgcagatgaagaaactgaggctggctgggtgcaggggctcacgcctgaaatcccagcactttgggaggccgaagcaggaggatcacttgagcccaggagtttaagaccagcctgggcaacatagtgagaccgcgtcactacaaaacaattcagaattagctgggtgtggtggtgcttgcatatagtcccagctactt-gggggg-ctgaggtgggaggatcacttgaacccaagaggtcgagattacagtgagctatgattgtgccactgcactccagcctggggaacagac i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73279645 384 - 125196307 GAATgcccatctcaactcactgttgCTTTGTGCAGGCACGATGATGTATTTTCTATATTGAATCATTTGTTCATCACAACCACCATTCCAttgtgcagatgaagaaactgaggctggctgggtgcaggggctcacgcctgtaatcccagcactttgggaggccgaggcaggaggatcgcttgagcccaggagtttgagaccagcctgggcaacatagtgagaccgcgtcactacaaaaaaattcagaattagctgggtgtggtggtgcttgcatatagtcccagctacttggggggg-ctgaggtgggaggatcacttgagcccaagaggtcgagattacagtgagctatgattgtgccactgcactccagcctggggaacagac i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72111998 383 - 125710982 GAATGCCCATCTCAACTCACTGttgctttgtgcaggcacaatgatgtattttctatattgaatcatttgttcatcacaaccaccattccattgtgcagatgaagaaactgaggctggctgggtgcaggggctcacgcctgtaatcccagcactttgggaggccgaggcaggaggatcgcttgagcccaggagtttgagaccagcctgggcaacatagtgagaccgcatcactacaaaaaaattcagaattagctgggtgtgatggtgcttgcatatagtcccagctactt-gagggg-ctgaggtgggaggatcacttgagcccaaaaggtcaagattacagtgagctatgattgtgccactgcactccagcctggggaacagac i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75570919 381 - 121768101 --ATGCCCGTCTCAACTCATTGCGGCTTTGCGGAGGCACGATGATGTATTTTCCATATTGCATCTTTTGTTCATCGCAACCACCATTCCATTGTGCAGATGAAGAGACTCAGGCTggctggacgcagcagctcatacctctaatcccagcactttgggaggctgaggcaggaggatcacttgagcctaggagtttgagaccagcctgggcaacatagtgagactgtatcaccacaaaaaaattaagaattagctgggtgtggtggtgctcacgtatagtcccagctactt-gggagg-ctaaggtgggaggatcacttgagcccaagaggtcacaattacagtgagctatgattgtcccactgcactacagcctgggtgacagag i calJac3.chr12 C 0 I 796 e canFam3.chr4 27729893 58 + 88276631 I e mm10.chr14 24173771 908 + 124902244 I a score=827562.000000 s hg38.chr10_KI270825v1_alt 79056 368 + 188315 aggc-tgtctcaataaaaaaataaaaaataaattaaaaaTAGAAACTGAGGCCCAGAGGCCAGGCACAGTGGCTCACCAGgcggtg-aattatacttgtaatcccagtactttgggaggccgaggcggaaggatcgcttgagtccaggagttcgagaccagcctggccaacatggcaaagccacgtctctagtaaaaatacaaaaaattagccgggcgtggtggcacatgcctgtaatcccagctacttgggaggctgaggcacgagaattgcttgaacccaggaggtagaggttgcagtgagccgagattgcgccactgcacttcaggctgggcaac---acgagactcagtctcat-------aaaaaaaaagaaaga s panTro4.chr10 76456638 369 + 133524379 aggc-tgtctcaataaaaaaataaaaaataaaTTTAAAATAGAAACTGAGGCCCAGAGGCCAGGCACAGTGGCTCACCAGgcggtg-aattatacttgtaatcccagtactttgggaggccgaggcggaaggatcacttgagtccaggagttcgagaccagcctggccaacatggcaaagccacgtctctactaaaaatacaaaaaattagccgggcgtggtggcacatgcctgtaatcccagctacttgggaggctgaggcacaagaattgcttgaacccaggaggtagaggttgcagtgagccgagatggcgccactgcacttcaggctgggcaacacaacgagactcagtctcat-------aaaaaaaa--aaaga i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76119620 379 - 133410057 aggcttgtctcaataaaaaaataaaaaataaattaaaaaTAGAAACTGAGGCCCAGAGGCCAGGCACAGTGGCTCACCAGgcggtg-aatgacacttgtaatcccagtactttgggaggctgaagcagaaggatcgcttgagtccaggagttcgagaccagcctggccaacatggcaaagccatgtctctactaaaaatacaaaaaattagccgggcatggtggcacatgcctgtaatcccagctacttgggaggctgaggcacgagaattgctagaacccaggaggtagaggtggcagtgagccaagattgcgccactgcacttcaggctgggcaacacaacaagactcagtctcattaaaaaaaaaaaaaaagaaaga i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35061990 369 + 104879549 aggc-tgtctcaataaaaaaataaaaaaTTAATTAAAAATAGAAACTGAGGCCCAGAGGCCAGGCATAGTGGCTCACCAGgcagtg-aattatgcttgtaatcccagtactttgggaggccgaggcagaaggatcgcttgagtccaggagttcgagaccagcctggccaacatggcaaagccatgtctctactaaaaatacaaaaaattagccgggcgtggtggcacatgcctgtaatcccagctacctgggaggctgaggcacgagaattgcttgaacccaggaggtagaggttgcagtgagccgagattgtgccactgcacttcaggctgggcaacacaacgagactcagtctc---------aaaagaaaggaagga i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73854217 358 - 130959383 aggc-tgtctcaacaaaaaagta-------aattaaaaatagaaaCTGAGGCCCAGAGGCCAGGCACAGTGGCTCACCAGGCGGTGAAAttatgcttgtaatcccgatactttgggaggctgaggcggaaggattgcttgagtccaggagttcgagaccagcctggccaacatggcaaagccacatctctactaaaaatacaaaaaattaaccaggcgtggcggcgcacgcctgtaaccccagctacttgggaagctgaggcatgagaattgcttgaacccgggaggtagaggttgcagtgagccaagattgtgccactgtacttcagcttgggcaacagaacaagactcggtctcat-----------aaa---aaaaa i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75415512 358 - 133195287 aggc-tgtctcaacaaaaaagta-------aattaaaaatagaaaCTGAGGCCCAGAGGCCAGGCACAGTGGCTCACCGGGTGGTGAAAttatgcttgtaatcccgatactttgggaggctgaggcggaaggattgcttgagtccaggagttcgagaccagcctggccaacatggcaaagccacatctctactaaaaatacaaaaaattaaccaggcgtggcggcgcacgcctgtaaccccagctacttgggaagctgaggcatgagaattgcttgaacccgggaggtagaggttgcagtgagccaagattgtgccactgtacttcagcttgggcaacagaacaagactcggtctcat-----------aaa---aaaaa i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73280029 362 - 125196307 aggc-tgtctcaacaaaaaagta-------aattaaaaatagaaactgaggcccagaggccaggcacagtggctcaccggGCGGTGAAATTATGCTTGTAATCctgatactttgggaggctgaggcggaaggattgcttgagtccaggagttcaagaccagcctggccaacatggcaaagccacatctctactaaaaatacaaaaaattagccaggcgtggcagcgcacgcctgtaaccccagctacttgggaagctgaggcatgagaattgcttgaacccgggaggtagaggttgcagtgagccaagattgtgccactgtacttcagcttgggcaacagaacaagactcggtctcat-------aaaaaaa---aaaaa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72112381 362 - 125710982 aggc-tgtctcaacaaaaaagta-------aattaaaaatagaaaCTGAGGCCCAGAGGCCAGGCACAGTGGCTCACCAGGCGGTGAAAttatgcttgtaatccccatactttgggaggctgaggtggaaggattgcttgagtccacaagttcgagaccagcctggccaacatgggaaagccacatctgtactaaaaatacaaaaaattagccaggcgtggcggcgcacgcctgtaactccagctacttgggaagctaaggcatgagaattgcttgaacccgggaggtagaggttgcagtgagccaagattgtgccactgtacttcagcttgggcaacagaacaagactcagtctcat-------aaaaaaa---aaaaa i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27729893 58 + 88276631 I e mm10.chr14 24173771 908 + 124902244 I e calJac3.chr12 75571300 796 - 121768101 I a score=20239.000000 s hg38.chr10_KI270825v1_alt 79424 9 + 188315 aagaaaCGG s panTro4.chr10 76457007 9 + 133524379 aagaaaCGG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76119999 9 - 133410057 aagaaaCGG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35062359 9 + 104879549 aaagaagga i nomLeu3.chr18 C 0 I 232 s rheMac3.chr9 73854575 9 - 130959383 aagaaaCAG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75415870 9 - 133195287 aagaaaCAG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73280391 9 - 125196307 aaaaaacag i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72112743 9 - 125710982 aagaaaCAG i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27729951 9 + 88276631 aggaaactg i canFam3.chr4 I 58 C 0 e mm10.chr14 24173771 908 + 124902244 I e calJac3.chr12 75571300 796 - 121768101 I a score=25092.000000 s hg38.chr10_KI270825v1_alt 79433 6 + 188315 AGGCCT s panTro4.chr10 76457016 6 + 133524379 AGGCCT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76120008 6 - 133410057 AGGCCT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35062600 6 + 104879549 aggcCT i nomLeu3.chr18 I 232 C 0 s rheMac3.chr9 73854584 6 - 130959383 AGGCCT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75415879 6 - 133195287 AGGCCT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73280400 6 - 125196307 aggcct i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72112752 6 - 125710982 AGGCCT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75572096 6 - 121768101 aggcCT i calJac3.chr12 I 796 C 0 s canFam3.chr4 27729960 6 + 88276631 aggccc i canFam3.chr4 C 0 C 0 e mm10.chr14 24173771 908 + 124902244 I a score=384018.000000 s hg38.chr10_KI270825v1_alt 79439 123 + 188315 AGAGAGGTTCGAGACCACATGACTGAGGAGGGCCATCTCCCAGCAAGGGGCCTGTGTCTCATGCATTCCCCACATCCCCTACCACTGCCCAGGCCTGACGAGGAGTTGCTGTCGGTTGAAAGA s panTro4.chr10 76457022 123 + 133524379 AGAGAGGTTTGAGACCACATGACTGAGGAGGGCCATCTCCCAGCAAGGGGCCTGTGTCTCATGCATTCCCCACATCCCCTACCACTGCCCAGGCCTGACGAGGAGTTGCTGTTGGTTGAAAGA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76120014 123 - 133410057 AGAGAGGTTCGAGACCACATGACTGAGGAGGGCCATCTCCAAGCAAGGGGCCTGTGTCTCATGCATTCCCCACATCCCCTACCACGGCCCGGGCCTGACGAGGAGTTGCTGTCGGTTGAAAGA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35062606 123 + 104879549 AGAGAGGTTCGAGACCACATGACTGAGGAGGGCCATCTCCCAGCAAGGGGCCTGTGTCTCATGCATTCCCCACATCCCCTACCACTGCCCAGGCCTGACGAGGAGTTGCTGTCGGTTGAAAGA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73854590 122 - 130959383 AGAGAGGTTTGAGACCACATGACTGAGGAGGGCCATCTCTCAGCAAGGGGCCTGTGTCTCATGCATTCCCCACATCCCCTATCACTGCCCGGGCGTGAAGAGAAGTTG-TATCAGTTGAAAGA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75415885 122 - 133195287 AGAGAGGTTTGAGACCACATGACTGAGGAGGGCCATCTCTCAGCAAGGGGCCTGTGTCTCATGCATTCCCCACATCCCCTATCACTGCCCGGGCGTGAAGAGAAGTTG-TATCCGTTGAAAGA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73280406 122 - 125196307 AGAGAGGTTTGAGACCACATGACTGAGGAGGGCCATCTCTCAGCAAGGGGCCTGTGTCTCATGCATTCCCCACATCCCCTATCACTGCCCGGGCGTGAAGAGAAGTTG-TATCAGTTGAAAGA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72112758 122 - 125710982 AGAGAAGTTTGAGACCACATGACTGAGGAGGGCCATCTCTCAGCAAGGGGCCTGTGTCTCATGCATTCCCCACATCCCCTATCACTGCCCGGGCGTGAAGAGAAGTTG-TATCAGTTGAAAGA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75572102 101 - 121768101 AGAGAGGTTCGAGATCACATGACTGAAGAGGGCC------CAGCAAGGGGCC---------TGCATTCCCCACACCCCCTGACACTG-CCGGGCCTGAAGACATGTTG------ATTGAAAGA i calJac3.chr12 C 0 C 0 s mm10.chr14 24174679 121 + 124902244 AGAGAGATGAGAGGTCATATGACTGAGGGGGCTCAGACTCTAGTTCAGGGCCTCAGACCCTCTCATTCTCCA-GTCCCCGACCTCTACCTGGGTAC-AGAAGGAGTCATTGCAGGTAGAAAGA i mm10.chr14 I 908 I 573 s canFam3.chr4 27729966 120 + 88276631 agagaggccagaggacCCGTGACTGAGGAGTGCGGCTCCCCCAGGACGAGCCCTTGCACCTTGCATGC-CCACGGCCCCCTGCACCGCCAGGATAT--CTCTGCATCCCTATCTGCAGAGAGA i canFam3.chr4 C 0 C 0 a score=77354.000000 s hg38.chr10_KI270825v1_alt 79562 25 + 188315 -----CATGCTGGTCACCCCCTGGGCATCA s panTro4.chr10 76457145 25 + 133524379 -----CATGCTGGTCACCCCTTGGGCATCA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76120137 25 - 133410057 -----CATGCTGGTCACCCCTTGGGCATCA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35062729 25 + 104879549 -----CATGCTGGTCACCCCTTGGGCATCA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73854712 25 - 130959383 -----CATGCTGGTCACCCATCAGGCATCA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75416007 25 - 133195287 -----CATGCTGGTCACCCATCAGGCATCA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73280528 25 - 125196307 -----CATGCTGGTCACCCATCAGGCATCA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72112880 25 - 125710982 -----CATGCTGGTCACCCATCAGGCATCA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75572203 25 - 121768101 -----TGTGCTGCTCACCCCTCAGGCATCA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27730086 30 + 88276631 CTCAGAGTCCCGGCCACCCCTACGGTGCCA i canFam3.chr4 C 0 I 2 e mm10.chr14 24174800 573 + 124902244 I a score=2245828.000000 s hg38.chr10_KI270825v1_alt 79587 659 + 188315 CCTGCCTCACACTTGGTACAGCAGGACCTGGTAGTAATGATCCAATGCATACCAGCCCTGCCAATCTGCCTGACCTTTAAACGCCTTGCTTTTTGCTTCTCATAAACCACCTTTGAAAGCTGCATTCTAACTGACCTGCACAGAAAGGC---AGAATAGAGGGATGTGAATATCTGAGAACTATTCTGATA-GGAAAAAAA------TCTGCTGTGATCAAGTCTAGAAGCTCTAATCAGAGCCACACACAACACAGACTGAAGGGAATC------------TCCATGGGCCCATCCAAGCCCCCGCAGGGCTCAGCTAGACCTA--GGGCAAGGAGC-----TCCGCG-ATGAGGAGAGGTTGAC--AGGTAGGAAGGAGACAGAAAATCCACATTGGCCACCCAGGAGTTGAGCTAGGTGGCCCAA-TCTAG-TGCTACCAAACATCCCAGCCCCCCAACCCTGGAGGTGTGGCCCCCAGAGAGCAAGGCTTTAGGAGAAGAA-TGTTGGGCTCAGCCTACTAGCACATCTTCCCAGCAGGAGCCTGAAATACTTTTTCAAGAGCAGACTCGTG-AGATGC------ACACTGCTGGTGAAAAAG----GGCCCCTGAGGGTGCTCTTCCAGACACAAGAGGCCTAACGTATCTATGGCTTTGGGAACTT-----GGCCTTGGTATCTTGCTTCATAATAAGCAAGTC s panTro4.chr10 76457170 662 + 133524379 CCTGCCTCACACTTAGTACAGCAGGACCTGGTAGTAATGATCCAATGCATACCAGCCCTGCCAATCTGCCTGACCTTTAAACGCCTTGCTTTTTGCTTCTCATAAACCACCTTTGAAAGCTGCATTCTAACTGACCTGCACAGAAAGGCAGAAGAATAGAGGGATGTGAATATCTGAGAACTATTCTGATA-GGAAAATAA------TCTGCTGTGATCAAGTCTAGAAGCTCTAATCAGAGCCACACACAACACAGACTGAAGGGAATC------------TCCATGGGCCCATCCAAGCCCCCGCAGGGCTCAGCTAGACCTA--GGGCAAGGAGC-----TCCGCG-ATGAGGAGAGGTTGAC--AGGTAGGAAGGAGACAGAAAATCCACATTGGCCACCCAGGAGTTGAGCTAGGTGGCCCAA-TCTAG-TGCTACCAAACATCCCAGCCCCCCAACCCTGGAGGTGTGGCCCCCAGAGAGCAAGGCTTTAGGAGAAGAA-TGTTGGGCTCAGCCTACTAGCACATCTTCCCAGCAGGAGCGTGAAATACTTTTTCAAGAGCAGACTCGTG-AGATGC------ACACTGCTGGTGAAAAAG----GGCCCCTGAGGGTGCTCTTCCAGACACAAGAGGCCTAACGTATCTATGGCTTTGGGAACTT-----GGCCTTGGTATCTTGCTTCATAATAAGCAAGTC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76120162 662 - 133410057 CCTGCCTCACACTTGGTACAGCAGGACCTGGTAGTAATGATCCAATGCATACCAGCCCTGCCAATCTGCCTGACCTTTAAACGCCTTGCTTTTTGCTTCTCATAAACCACCTTTGAAAGCTGCATTCTAACTGACCTGCACAGAAAGGCAGAAGAATAGAGGGATGTGAATATCTGAGAACTATTCTGATA-GGAAAAAAA------TCAGCTGTGATCAAGTCTAGAAGCTCTAATCAGAGCCACACACAACATAGACTGAAGGGAATC------------CCCATGGGCCCATCCAAGCCCCCGCAGGACTCAGCTAGACCTA--GGGCAAAAAGC-----TGCACG-ATGAGGAGAGGTTGAC--AGGTAGGAAGGAGACAGAAAATCCACATTGGCCA-CCAGGAGTTGAGCTAGGTGGCCCAA-TCCAA-TGCTACCAAACATCCCAGCCCCCCAACCCTGGAGGTGTGGCCCCCAGAGAGCAAGGCTTTAGGAGAAGAA-TGTTGGGCTCAGCCTACTAGCACATCTTCCCAGCAGGAGCCTGAAATACTTTTTCAAGAGCAGACTCGAGCAGACGC------ACACTGCTGGTGAAAAAG----GGCCCCTGAGGGTGCTCTTCCAGACACAAGAGGCCTAATGTATCTATGGCTTTGGGAACTT-----GGCCTTGGTATCTTGCTTCATAATAAGCAAGTC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35062754 660 + 104879549 CCTGCCTCACACTTGGTACAGCAGGACCTGGTAGTAATGATCCAATGCATACCAGCCCTGCCAATCTGCCTGACCTTTAAACGCCTTGCTTTTTGCTTCTCATAAACCACCTTTGAAAGCTGCATTCTAACTGACCTGCACAGAAAGGCAGAAGAATAGAGGGATGTGAATATCTGAGAACTATTCTGATC-GGAAAAAAA------TCTGTTGTGATCAAGTCCAGAAGCTCTAATCAGAGCCACACACAACATAGACTGAAGGGAATC------------TCCATGGGCCCATCTAAGCCCCAGCAGGGCTCAGCTAGACCTA--GGGCAAGGAGC-----TCC----ATGAGGAGAGGTTGAC--AGGTAGGAAGGAGACAGAAAATCCACATTGGCCACCCAGGAGTTGAGCTAGGTGGCCCAA-TCCAG-TGCTACCAAACATCCCAGCCCCCCAACCCTGGAGGTGTGGCCCCCAGAGAGCAAGGCTTTAGGAGAAGAA-TGTTGGGCTCAGCCTACTAGCACATCTTCCCAGCAGGAGCCTGAAATACTTTTTCAAGAGCAGATTTGAGCAGATGC------ACACTGCTGTTGAAAAAG----GGCCCCTGAGGGTGCTCTTCCAGACACAAGAGGCCTAACGTATCTATGGCTTTGGGAACTT-----GGCCTTGGTATCTTGCTTCATAATAAGCAAGTC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73854737 664 - 130959383 CCTGCCTCACACTTGGTATGGCAGGACCTGGTAGTAATGATCCAATGCATACCACCCCTGCCAAACTGCCTGACCTTT-AACGCCTTGCTTTTTGCTTCTCATAAACCACCTTTGAAAGCTGCATTCCAACTGACCTGCACAGAAAGGCAGGAGAATAGAGGGACGTGAATATCCGAGAACTATTCTGATAGGGGAAAAAA------TCTGCTGTGATCAAGTCTAGAAGCTCTAATCAGAGCCACACACAACACAGACTGAAGGGAATC------------TCCATGGGCCCATCCAAGCCCCAGCAGGGCTCAGCTAGACCTA--GGGCAAGGAGC-----TCCACG-ATGAGGAGAGGTTGAC--AGGTAGGAAGGAGGCAGAAAATCCACATTGGCCACCCAGGAGTTGAGCTAGATGGCCCAA-TCCAA-TGCTATCAAACATCCCAGCTCCCCAACCCTGGAGGTGTGGCCCCCAGGCAGCAAAGCTTCAGGAGAAGAACTAGTAGGCTCAGCCTACTAGCACATCTTCCCAGCAGGAGCCTGAAACACTTTTTCAAGAGCAGACTCGATCAGATGC------ACACTGCTGGTGGAGACG----GGCCCCTGAGGGTACTCTTCCAGACGCAAGAGGCCTAACGTATCTATGGCTTTGGGAACTT-----GGCCTTGGTATCTTGCTTCATAATAAGCAAGTC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75416032 664 - 133195287 CCTGCCTCACACTTGGTATGGCAGGACCTGGTAGTAATGATCCAATGCATACCACCCCTGCCAAACTGCCTGACCTTT-AACGCCTTGCTTTTTGCTTCTCATAAACCACCTTTGAAAGCTGCATTCCAACTGACCTGCACAGAAAGGCAGGAGAATAGAGGGACGTGAATATCCGAGAACTATTCTGATAGGGGAAAAAA------TCTGCTGTGATCAAGTCTAGAAGCTCTAATCAGAGCCACACACAACACAGACTGAAGGGAATC------------TCCATGGGCCCATCCAAGCCCCAGCAGGGCTCAGCTAGACCTA--GGGCAAGGAGC-----TCCACG-ATGAGGAGAGGTTGAC--AGGTAGGAAAGAGGCAGAAAATCCACATTGGCCACCCAGGAGTTGAGCTAGGTGGCCCAA-TCCAA-TGCTATCAAACATCCCAGCTCCCCAACCCTGGAGGTGTGGCCCCCAGGCAGCAAAGCTTCAGGAGAAGAACTAGTAGGCTCAGCCTACTAGCACATCTTCCCAGCAGGAGCCTGAAACACTTTTTCAAGAGCAGACTCGATCAGATGC------ACACTGCTGGTGGAGACG----GGCCCCTGAGGGTACTCTTCCAGACGCAAGAGGCCTAACGTATCTATGGCTTTGGGAACTT-----GGCCTTGGTATCTTGCTTCATAATAAGCAAGTC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73280553 664 - 125196307 CCTGCCTCACACTTGGTATGGCAGGACCTGGTAGTAATGATCCAATGCATACCACCCCTGCCAAACTGCCTGACCTTT-AACGCCTTGCTTTTTGCTTCTCATAAACCACCTTTGAAAGCTGCATTCCAACTGACCTGCACagaaaggcaggagaatagagGGACATGAATATCCGAGAACTATTGTGATAGGGGAAAAAA------TCTGCTGTGATCAAGTCTAGAAGCTCTAATCAGAGCCACACACAACACAGACTGAAGGGAATC------------TCCACGGGCCCATCCAAGCCCCAGCAGGGCTCAGCTAGACCTA--GGGCAAGGAGC-----TCCACG-ATGAGGAGAAGTTGAC--AGGTAGGAAGGAGGCAGAAAATCCACATTGGCCACCCAGGAGTTGAGCTAGGTGGCGCAA-TCCAA-TGCTATCAAACATCCCAGCTCCCCATCCCTGGAGGTGTGGCCCCCAGACAGCAAGGCTTCAGGAGAAGAACTAGTAGGCTCAGCCTAGTAGCACATCTTCCCAGCAGGAACCTGAAACACTTTTTCAAGAGCAGACTCGATCAGATGC------ACACTGCTGGTGGAGAAG----GGCCCCTGAGGGTACTCTTCCAGACGCAAGAGGCCTAACATATCTATGGCTTTAGGAACTT-----GACCTTGGTATCTTGCTTCATAATAAGCAAGTC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72112905 664 - 125710982 CCTGCCTCACACTTGGTATGGCAGGACCTGGTAGTAATGATCCAATGCATACCACCCCTGCCAAACTGCCTGACCTTT-AACGCCTTGCTTTTTGCTTCTCATAAACCACCTTTGAAAGCTGCATTCCAACTGACCTGCACAGAAAGGCAGAAGAATAGAGGGGCGTGAATATCCGAGAACTATTCTGATAGGGGAAAGAA------TCTGCTGTGATCAAGTCTAGAAGCTCTAATCAGAGCCACACACAACACAGACTGAAGGGAATC------------TCCATGGGCCCATCCAAGCCCCAGCAGGGCTCAGCTAGACCTA--GGGCAAGGAGC-----TCCACG-ATGAGGAGAGGTTGAC--AGGTAGGAAGGAGGCAGAAAATCCACACTGGCCACCCAGGAGTTGAGCTAGGTGGCCCAA-TCCAA-TGCTATCAAACATCCCAGCTCCCCAACCCTGGAGGTGTGGCCCCCAGACAGCAAGGCTTCAGGAGAAGAACTAGTAGGCTCAGCCTACTAGCACATCTTCCCAGCAGGAGCCTGAAACACTTTTTCAAGAGCAGACTCGATCAGATGC------ACACTGCTGGTGGAGAAG----GGCCCCTGAGGGTACTCTTCCAGACGCAAGAGGCCTAACGTATCTGTGGCTTTGGGAACTT-----GGCCTTGGTATCTTGCTTCATAATAAGCAAGTC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75572228 655 - 121768101 CCTGCCTCACACTTGGTACAGCAGGACCTAGTAGTAATGATCCAATACACACCACCCCTGCCAATCGGCCTGACCTTC-AACACCTTGCTTTTTGCTTCTTATAAACCGCTTATGAAACCTGCATTATAACTGACCTGCAGAGAAAGGC---AGAATAGAGTGGCATGAATGTCTGAGAACTATTCTGATAGGAAAAAGAG------TCTGCTGTGATCAAGTCTAGAAGCTCTAATCAGAGACACACACGACACAGACTGACGGGAATC------------TCCACAGGCCCATCCAAGCCCTAGCAGGGCTCAGCTAGAC--A--GGGCCAGGGAG-----CATGCGCATGAGCAGAGGCTGAC------AGGAACCAGGCAGAGAATCCACACTGGCCACGCAGGAGTCCAGCTAGGTGGCCCAA-TACAA-TGCTATGGAACATCCCAGCCCCACCACCCTGGAGGGGTGGCCCCCGGAGAGCAAGGCTTTAGGAGAAGAG-CGTTGGGCTCTGCCTACTAGCACATCTTCCCAACAGGAGCCTGAAATAAGCTTTCAAGAGCAGACTTGATCAGATGC------ACACTGCCAGTGAAAAGG----AGGCCCTGAGGGTGCTCTTCCAGATGCAAGAGGCCTAACGTATCTGTGGCTTTGGGAACTT-----GGCCTTGGTATCTTGCTTCATAATAAGCAAGTC i calJac3.chr12 C 0 C 0 s mm10.chr14 24175373 566 + 124902244 CCTGCCTCATCCCTGGTACA--------------CAGTGATCT-CTGTAGAGCACCCATGCCAGTCTTCCTGACCTTT-----------CTTCCACTTCTCACACACCGCTTTGCTCACCCGCATCCTAACAGACCTGCACAGAAAACGAGAAGCGTAGAAG--CAGGAAT---CGAGAACAGCTTTGATG-GGAGTAGAGGGGTACTCTAGTATTCCCAAGTCTAAAGACTCTTGTCAAAGCCAC---------AGCGTGA----------------------------------------CCAGCAGGGCACACCTGGACCAG------AAGGAACATTCGTCAGTG-GTGAGGTACAGCTGGC-CAGGCAGGAAAG---------------------CACACAGGAGTTCATCTAAAAGGCTCAG-TCCTGCCGCTACCGAATACCTCAG-TCTCCAGCCCTGGAGGGACTA-TCCCAGAGGGCAAGGCTTTAGAACAAGGCCTA--AGGCTCAAGACAGCAGAAAGCTGTGCACACAGGAACTTGGAGCTCCTCT----GAGTACAC------AAATG------------GCTGGTGGACAAA----GGCCCCTGAGGGTGCTCCTCTGAACCCATGAGG-CTATCAGTTCTATGAGGCTAAGAACTCTAGAAGGTCTCAG--ACCTGGTTCACAGAGAGCCAGTA i mm10.chr14 I 573 I 192 s canFam3.chr4 27730118 629 + 88276631 CCTGCCAC---------------------------AACAATGTAACGCACGCTGCCTCCACCTACCTGTCTGACCATT-AACACCTTGCTTTTTGCTCCTCACAGACCAGTCTCGAAGGCTACATC----CTGACCTGCAGAG-----CAGGAGAATGGAGGGGCAGGAGCA---GAGGACTCTTTCAGT--GGGAAAAAG------TCAGCTGTGATC-AGTTCAGCAGTTCTAAGCGAAGCCAC--ACAACAGAACGGGAAGGGAACCTCCAACAGCGAATCCACGAGCTCACACGAGCCCCAGCAGGGCTCACCTGGACTTACGGGGAAACCGTG-----TCAGCA-ACGAGGTCAAGGTGGCTCAGGCAGGAAAGATGGAGAGAGCCCTTGCTGATCACCCAGGAGTCCAGCTCAGTGGCCCGATTCTGG-TGCTACT--CTAGCCCAG-CCCCTGACACTGGAGGCATTTCCCCCAGGGAGCAAGGCCT------AAAGCCCCTTGGGCTCAGCCTAGCACAGCTTCTCCCCAGCAGGACTTCAGA----TCTTTAAGGAGCAGACTC-CTCAGATGTTTGGGGGCCAGGAAAGGGGAAAAGGAAAGAAATCTGAGGGGTCTATTCTGGATTCAGAAGGCCAAAGGTATCAATGGCTTTGGGTACTT-----GGCCTTGGGATCTTAC----CAAGGGGCAAGTC i canFam3.chr4 I 2 C 0 a score=279265.000000 s hg38.chr10_KI270825v1_alt 80246 83 + 188315 CTTGAGATAT-CACTGAC-TTCAGCATGGGACTGATCTGCAATTACGTAGCAATGGGTTTGGGTGTGAGTGT--------------------------tggtgtgtaagct s panTro4.chr10 76457832 84 + 133524379 CTTGAGATAT-CAATGACTTTCAGCATGGGACTGATCTGCAATTACGTAGCAATGGGTTTGGGTGTGAGTGT--------------------------tggtatgtaagct i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76120824 110 - 133410057 CTTGAGATAT-CACAGACTTTCAGCATGGGACTGATCTGCAATTACGTAGCAATGGGTTTGGGTGTGAGAGTGTTGGTGTGTGTCATCTGACTCTTCCTGGTGTGTAAGCT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35063414 109 + 104879549 CTTGAGATAT-CACTGACTTTCAGCATGGGACTGATCTGCAA-TACATAGCAGTGGGTTTGGGTGTGAGAGTGCTGGTGTGTGTCATCTGACTCTTCCTGGTGTGTAAGCT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73855401 110 - 130959383 CTTGAGATAT-CACTGACTTTCAGCATGAGACTGATCTGCAATTACGTAGCAATGGGTTTCGGTGTGAGAGTATCGGTGCGCGTCATCTGACTCTTCCTGGTGTGTAAGCT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75416696 110 - 133195287 CTTGAGATAT-CACTGACTTTCAGCATGAGACTGATCTGCAATTACGTAGCAATGGGTTTCGGTGTGAGAGTATCGGTGCGCGTCATCTGACTCTTCCTGGTGTGTAAGCT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73281217 110 - 125196307 CTTGAGATAT-CACTGACTTTCAGCATGAGACTGATCTGCAATTACATAGCAATGGGTTTGGGTGTGAGAGTATCGGTGCGCGTCATCTGACTCTTCCTGGTGTGTAAGCT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72113569 110 - 125710982 CTTGAGATAT-CACTGACTTTCAGCATGAGACTGATCTGCAATTACGTAGCAATGGGTTTGGGTGTGAGAGTATCGGTGCGCGTCATCTGACTCTTCCTGGTGTGTAAGCT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75572883 103 - 121768101 CTTGAGATAT-C--TGACTTTCAGTAT-----TGATCTGCAATTATGTAGCAATGGGGTTGGGTGTGAGAGTGTCAGTGTGTGTCATCTGACTCTTCCTGGTGTATAAGCT i calJac3.chr12 C 0 C 0 s canFam3.chr4 27730747 81 + 88276631 TTTGAGACATGCAGTGACCGCCAACACCAGGCTGACCTACGCGCCCTCGACCACCAGCTGGGGTGTGAGAGTGTCTGTGCA------------------------------ i canFam3.chr4 C 0 C 0 e mm10.chr14 24175939 192 + 124902244 I a score=2642561.000000 s hg38.chr10_KI270825v1_alt 80329 662 + 188315 ccgggcagc----------catgactgtgt----------------------------------------ctgggtctc-------cctcccgc--------cttgtccc------------------------------------------ctgtaatccagactagagctgggcattaagcatgagctca-----------ggcagtgtctgataaCCCAGCTTGCACTTAGGCCTCCAGTGAGAAGCCATTTACTCCAAC---TCAG--GAGGCTTCTAAT-CCGGACACCACGCACTCTGCA-----GCCCCTCTTCCCGGGATGCTGTAGGAGAGGCTGAAAGCCAGCCACCGGCCCACCCACCTACCTGCCGCAGCGCCTCCATCTCCTCATTGGCCGCCTTCTTCTCAGATGTGCTGCTCTTGAGCTTGGACTCGGCCAGCTCCACTTCGGTCTGCAGCTTGTCCAGCTCAGAGATGACCTGGTCACGCTCACTCATGATGAGCTTGTACTCGCTGTACACAGCGTCCCGCTCCTCCCTGTATTTCTCCGACTCCTTTGCTGTCTTCACCTGCGTGGTTCTCAGCTCGGTCAGCTCTGACTGCAGCAGCTCCATCTCCCACTGCAGGTCCTTGTTCTGCGCCGTGGCCTTGTTCAGCTCATGGTGGATCGCCTCAAACCT-GGCAAGAGAGG-TGGC-GAGATGTGGGAAGGGCGGGGGCCCTGCCCGGTCAGTGGCCGGCTGCGCTGCTGCCTCCCG---CCAGCTCTACTGTGCTGGACAGTCAAGCG s panTro4.chr10 76457916 663 + 133524379 ccgggcagc----------cacgactgtgt----------------------------------------ctgggtctc-------cctccccc--------cttgtccc------------------------------------------ctgtaatccagactagagctgggcattaagcatgagctca-----------ggcagtgtctgataaCCCAGCTTGCACTTAGGCCTCCAGTGAGAAGCCGTTGACTCCAAC---TCAGGAGAGGCTTCTAAT-CCGGACACCACGCACTCTGCA-----GCCCCTCTTCCCGGGACGCTGTAGGACAGGCTGAAAGCCAGCCACCGGCCCACCCACCTACCTGCCGCAGCGCCTCCATCTCCTCATTGGCCGCCTTCTTCTCAGATGTGCTGCTCTTGAGCTTGGACTCGGCCAGCTCCACTTCGGTCTGCAGCTTGTCCAGCTCAGAGATGACCTGGTCACGCTCACTCATGATGAGCTTATACTCGCTGTACACAGCGTCCCGCTCCTCCCTGTATTTCTCCGACTCCTTTGCTGTCTTCACCTGCGTGGTTCTCAGCTCGGTCAGCTCTGACTGCAGCAGCTCCATCTCCCACTGCAGGTCCTTGTTCTGCGCCGTGGCCTTGTTCAGCTCATGGTGGATCGCCTCAAACCT-GGCAAGAGAGG-TGGC-GAGATGTGGGAGGGGCGGGGGCCCTGCCCGGTCAGTGGCCGGCTGCGCTGCTGCCTCCCG---CCAGCTCTACTGTGCT-GACAGTCAAGCG i panTro4.chr10 C 0 M 473 s ponAbe2.chr10 76120934 673 - 133410057 CTGGGCAGC----------CACGACTGTGT----------------------------------------CTGGGTCTC-------CCTCCCCT--------CGTGTCCC------------------------------------------CTGTAATCCAGACTAGAGCTGGGCATTAAGCATGAGCTCAGGAGTTACCTGGGCAGTGTCTGATAACCCAGCTTGCACTCAGGCCACCAGTGAGAAGCCCTTTACTCCAAC---TCAG--GAGGCTTCTAAT-CTGGACACCATGCACTCTGCA-----GCACCTCTTCCCGGGACGCTGTAGGAAAGGCTGAAAGCCAGCCACCGGCCCACCCACCTACCTGCCGCAGCGCCTCCATCTCCTCATTGGCCGCCTTCTTCTCAGATGTGCTGCTCTTGAGCTTGGACTCGGCCAGCTCCACTTCGGTCTGCAGCTTGTCCAGCTCAGAGATGACCTGGTCACGCTCACTCATGATGAGCTTGTACTCGCTGTACACAGCGTCCCGCTCCTCCCTGTATTTCTCTGACTCCTTCGCTGTCTTCACCTGCGTGGTTCTCAGCTCGGTCAGCTCTGACTGCAGCAGCTCCATCTCCCACTGCAGGTCCTTGTTCTGCGCAGTGGCCTTGTTCAGCTCATGGTGGATCGCCTCAAACCT-GGCGAGAGAGG-CAGC-GAGACATGGGAGGGGCGGGGGCCCTGCCCGGTCAGTGGCCGGCTGCACTGCTGCCTCCCG---CCAGCTCTACTGTGCTGGACAGTCAAGCG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35063523 673 + 104879549 CCGGGCATC----------CACGACTGTGT----------------------------------------CTGGCTCGC-------CCTCCCCG--------CTTGTCCC------------------------------------------CTGTAATCGAGACTAGAGCTGGGCATTAAGCATGAGCTCAGGAGTTACCTTGGCAGTGTCTGATAACCCAGCTTGCACTTAGGCCTCCAATGAGAAGCCCTTTACTCCAAC---TCAG--GAGGCTTCTAAT-CCGGACACCATGCACTCTGCA-----GCCCCTCTTCCCGGGACGCTGTAGGAGAGGCTGAAAGCCAGCCACCGGCCCACCCACCTACCTGCCGCAGCGCCTCCATCTCCTCATTGGCCGCCTTCTTCTCAGATGTGCTGCTCTTGAGCTTGGACTCGGCCAGCTCCACTTCGGTCTGCAGCTTGTCCAGCTCAGAGATGACCTGGTCACGCTCACTCATGATGAGCTTGTACTCGCTGTACACAGCGTCCCGCTCCTCCCTGTATTTCTCCGACTCCTTTGCTGTCTTCACCTGCGTGGTTCTCAGCTCGGTCAGCTCTGACTGCAGCAGCTCCATCTCCCACTGCAGGTCCTTGTTCTGCGCCGTGGCCTTGTTCAGCTCATGGTGGATCGCCTCAAACCT-GGCGAGAGAGG-CGGC-GAGACGTGGGAGGGGCGGGGGCCCTGCCCGGTCAGTGGCCGGCTGCGCTGCTGCCTCCAG---CCAGCTCTACTGTGCTGGACAGTCAAGCG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73855511 675 - 130959383 CCAGGTATC----------CATGACTATGT----------------------------------------CTGGGCCTC-------CCTCCCCA--------CTTGTCCC------------------------------------------CTGTAATCCAGACTACAGCTGGGCATTGAGCATGAGCTCAGGAGTTACCTTGGTGGTGTCTGATAACCCAGCTTGCACTTAGGCCTTCTATCAGAAGCCCTTTACTCCAATG-GGAAG--GAGGCTTCTAAT-CCAGACACCATGCACTCTGCA-----GCCCCTCTTCCCGGGACGCTGTAGGAGAGGCTGAAAGCCAGCCACCAGCCCACCCACCTACCTGCCGCAGCGCCTCCATCTCCTCACTGGCCGCCTTCTTCTCAGATGTGCTGCTCTTGAGCTTGGACTCGGCCAGTTCCACCTCGGTCTGCAGCTTGTCCAGCTCAGAGATGACCTGGTCGCGCTCACTCATGATGAGCTTGTACTCGCTGTACACAGCGTCCCGCTCCTCCCTGTACTTCTCCGACTCCTTCGCTGTCTTCACCTGCGTGGTTCTCAGCTCGGTCAGCTCTGACTGCAGCAGCTCCATCTCCCACTGCAGGTCCTTGTTCTGCGCTGTGGCCTTGTTCAGCTCATGGTGGATCGCCTCAAACCT-GGGGAGAGAGG-CGGC-GAGATGTGGGAGGGGCGGGGGCGCTGCCCGGTCAGTGGCCGGCTGCGCTGCTGCCTCCCG---CCAGCTCTGCGGTGCTGGACAGTCAAGCA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75416806 675 - 133195287 CCAGGTATC----------TACGACTATGT----------------------------------------CTGGGCCTC-------CCTCCCCA--------CTTGTCCC------------------------------------------CTGTAATCCAGACTACAGCTGGGCATTGAGCATGAGCTCAGGAGTTACCTTGGTGGTGTCTGATAACCCAGCTTGCACTTAGGCCTTCTATCAGAAGCCCTTTACTCCAATG-GGAAG--GAGGCTTCTAAT-CCAGACACCATGCACTCTGCA-----GCCCCTCTTCCCGGGACGCTGTAGGAGAGGCTGAAAGCCAGCCACCAGCCCACCCACCTACCTGCCGCAGCGCCTCCATCTCCTCACTGGCCGCCTTCTTCTCAGATGTGCTGCTCTTGAGCTTGGACTCGGCCAGTTCCACCTCGGTCTGCAGCTTGTCCAGCTCAGAGATGACCTGGTCGCGCTCACTCATGATGAGCTTGTACTCGCTGTACACAGCATCCCGCTCCTCCCTGTACTTCTCCGACTCCTTCGCTGTCTTCACCTGCGTGGTTCTCAGCTCGGTCAGCTCTGACTGCAGCAGCTCCATCTCCCACTGCAGGTCCTTGTTCTGCGCTGTGGCCTTGTTCAGCTCATGGTGGATCGCCTCAAACCT-GGGGAGACAGG-CGGC-GAGATGTGGGAGGGGCGGGGGCGCTGCCCGGTCAGTGGCCGGCTGCGCTGCTGCCTCCCG---CCAGCTCTGTGGTGCTGGACAGTCAAGCA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73281327 675 - 125196307 CCAGGTATC----------CACGACTATGT----------------------------------------CTGGGCCTC-------CCTCCCCA--------CTTGTCCC------------------------------------------CTGTAATCCAGACTAGAGCTGGGCATCgagcatgagctcaggagttaccTCGGTGGTGTCTGATAACCCAGCTTGCACTTAGGCCTCCTATCAGAAGCCCTTTACTCCAATG-GGAAG--GAGGCTTCTAAT-CCAGACACCATGCACTCTGCA-----GCCCCTCTTCCCGGGACGCTGTAGGAGAGGCTGAAAGCCAGCCACCAGCCCACCCACCTACCTGCCGCAGCGCCTCCATCTCCTCACTGGCCGCCTTCTTCTCAGATGTGCTGCTCTTGAGCTTGGACTCGGCCAGTTCTACCTCGGTCTGCAGCTTGTCCAGCTCAGAGATGACCTGGTCGCGCTCACTCATGATGAGCTTGTACTCGCTGTACACAGCGTCCCGCTCCTCCCTGTATTTCTCCGACTCCTTCGCTGTCTTCACCTGCGTGGTTCTCAGCTCGGTCAGCTCTGACTGCAGCAGCTCCATCTCCCACTGCAGGTCCTTGTTCTGCGCTGTGGCCTTGTTCAGCTCATGGTGGATCGCCTCAAACCT-GGGGAGAGAGG-CGGC-GAGACGTGGGAGGGGCGGGGGCGCTGCCCGGTCAGTGGCCGGCTGCGCTGCTGCCTCCCG---CCAGCTCTGTGGTGCTGGACAGTCAAGCG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72113679 675 - 125710982 CCAGGTATC----------CATGACTATGT----------------------------------------CTGGGCCTC-------CCTCCCCA--------CTTGTCCC------------------------------------------CTGTAATCCAGACTAGAGCTGGGCATTGAGCATGAGCTCAGGAGTTACCTCAGTGGTGTCTGATAACCCAGCTTGCACTTAGGCCTCCTATCAGAAGCCCTTTACTCCAACG-GGAAG--GAGGCTTCTAAT-CCAGACACCATGCACTCTGCA-----GCCCCTCTTCCCGGGACGCTGTAGGAGAGGCTGAAAGCCAGCCACCGGCCTACCCACCTACCTGCCGCAGCGCCTCCATCTCCTCACTGGCCGCCTTCTTCTCAGATGTGCTGCTCTTGAGCTTGGACTCAGCCAGTTCCACCTCGGTCTGCAGCTTGTCCAGCTCAGAGATGACCTGGTCGCGCTCACTCATGATGAGCTTGTACTCGCTGTACACAGCGTCCCGCTCCTCCCTGTATTTCTCCGACTCCTTCGCTGTCTTCACCTGCGTGGTTCTCAGCTCGGTCAGCTCTGACTGCAGCAGCTCCATCTCCCACTGCAGGTCCTTGTTCTGCGCTGTGGCCTTGTTCAGCTCATGGTGGATCGCCTCAAACCT-GGGGAGAGAGG-CGGC-GAGACGTGGGAGGGGCAGGGGCCCTGCCCGGTCAGTGGCCGGCTGTGCTGCTGCCTCCCG---CCAGCTCTGCTGTGCTGGACAGTCAAGCG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75572986 677 - 121768101 CCAGGCACC----------CAAGACGGTGT----------------------------------------CTGGGCCTC-------CCTCCCGG--------CTTGTCCC------------------------------------------TTATAATCCAGACTAGAGCTGGGCACTACGCATGAGCTTGGGAGTTACCTGGATGGTGTCTGATAACCCAGCTTG--CTTAGGCCTTCAATGAGAAGCCCTTTACTCCAACTCAGAAG--GAGGCTTCTAAT-CTGCACA-TGTGGACTCTGCACCCCCTCCCCTCTTCCCTGGATGGTGTAGGAGAGGCTGAAAGCCAGCCACCAGCCTGCCCACCTACCTGCCGCAGTGCCTCCATCTCCTCGCTGGCTGCCTTCTTCTCAGAAGTGCTGCTCTTGAGCTTGGACTCAGCCAGCTCCACCTCGGTCTGCAGCTTGTCCAGCTCAGAGATGACCTGGTCACGCTCACTCATGATGAGCTTGTACTCGCTGTACACAGCGTCCCGCTCCTCCCTGTACTTCTCTGACTCCTTCACTGTCTTCACCTGTGTGGTTCTCAGCTCGGTCAGCTCTGACTGCAGCAGCTCCATCTCCCACTGCAGGTCCTTGTTCTGTGCCGTGGCCTTGTTCAGCTCATGGTGGATTGCCTCAAACCT-GGCGAGAGAGG-CAGC-GAGACGTGAGAGGGGCGGGGGC-CTGCCCCGTCAGTGCTCGGCTGCACTGCTGCCTCCTG---CCAGCTCCGCTGTGCTGGACAGTCAAGTG i calJac3.chr12 C 0 C 0 s mm10.chr14 24176131 682 + 124902244 CTGGGCACCTGCACAAGGTCATGAGACCAG----------------------------------------CTCAGTCCT-------CTTACCCAAGAGGCACCTTGTACCCATGTGCATGTCCTCCTATATACAGGACAATGGCCAGACATTCTGGACCCCAGACTAATGTCAAATACCAAACCTAAGCTCCGCAGAGACCCACATGCTATCTCCCAGCCCAGCCTG------------TGAAGGGAAGGCCCTGGCGC-------TCAG----ACCTTCTCGT-CCTGCCCTCAAGAACTCTGTG-----GCCACCTTCCCCG-------------------------------CTGGACCA-CCGCCTACCTGCCGCAGGGCCTCCATCTCCTCGCTGGCTGCCTTCTTCTCGGATGTGCTGCTTTTGAGCTTGGACTCGGCCAGCTCTACCTCTGTCTGTAGCTTGTCCAGCTCGGAGATGACCTGGTCGCGTTCGCTCATGATGAGCTTGTACTCGCTGTACACAGCATCGCGCTCCTCCTTGTATTTCTCTGACTCCTTGGCGGTTTTCACCTGCTTGCTCCTCAGCTCCGTGAGCTCGGATTGCAGCAGCTCCATCTCCCACTGCAGGTCCTTGTTCTGGGCTGTGGCCTTGCTCAGCTCATGGTGGATCGTCTCAAACCT-GGCGAGCAAGGAAAAC-GTGAGGTGGGAGGGGCAGGGAC-CTGCCTTGTCAGCTGTGAG----GCTGCTACCCCCCAGCCTCAGCCCCGCTGTGCGAGACAGTCAAGCG i mm10.chr14 I 192 C 0 s canFam3.chr4 27730828 687 + 88276631 CAGAGCACA----------CACGTCTGTGTGTATCACCTGACTTACTTGCACCACTGTAAGCTCCAAGGCCCGGACCACAGCCGGACATCCCTT--------TGCATGCC------------------------------------------CTGCAGCCCAGGCTGGAGCTGGGCCCCAGGTGTGAGCTCAGCAGCCTCCCAGGTGGAATCCCATAACCCAGCCAGCCTGCAGGCCTAACAGGAGAAGCCCTTTGCTCTGACTCAGGAA--GAGGCCACCAGTGCAGGACACGGTGGCCACCCCA-----GCCCCACT-CTCGCGTCGCTTTCTCAGAGGCTGGGAG---GCCAGCTGCCCA-CTGCTCACCTGCCGCAGCGCCTCCATCTCCTCGCTGGCGGCCTTCTTCTCAGACGTGCTGCTCTTGAGCTTGGACTCGGCCAGCTCCACCTCGGTCTGCAGCTTGTCCAGCTCGGAGATGACCTGGTCACGCTCACTCATGATGAGCTTGTACTCGCTGTACACCGCGTCCCGCTCCTCCTTGTACTTCTCTGACTCTTTGGCCATTTTTGCCTGCATGGTCCTCAGCTCGGTCATCTCCGACTGCAGCAGCTCCATCTCCCACTGCAGGTCCTTGTTCTGGGCTGTGGCCTTGTTCAGCTCATGGTGGATCGCCTCAAACCTGGGGGAGAGAGG-CAGCTGGGAC---AGGGGGGCGGGGAC-CTGCCCG---------------------------------GCAGCTCTGCTGTCCTGGACAGTCAAGCA i canFam3.chr4 C 0 C 0 a score=396128.000000 s hg38.chr10_KI270825v1_alt 80991 117 + 188315 TGAAGTTTCAAGTGAAGTCACTCTCTCCA--CCCCCAGGAGAGAAAAGTCATGGAGTACCAGTGCCCCCGGACCTGGAATTTTTCTCAGCCCTTTACAAATGCCAGGAGTTGAACTGAG s ponAbe2.chr10 76121607 117 - 133410057 TGAAGTTTCAAGTGAAGTCACTCTCTCCA--CCCCCAAGAGAGAAAAGTCACGGAGTACCAGTGCCCCCGGACCTGGAATTTTTCTCAGCCCTTTACAAATGCCAGGAGTTGAACTGAG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35064196 116 + 104879549 TGAAGTTTC-AGTGAAGTCACTCTCTCCA--CCCCCAAGAGAGAAAAGTCATGGAGTACCAGTGCCCCCGGACCTGGAATTTTTCTCAGCCCTTTACAAATGCCAGGAGTTGAACTGAG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73856186 115 - 130959383 TGAAATTTCAAGTGAAGTCACTCTCTCCA--CCCCCA--AGAGAAAAGTCACGGAGTACCAGTGCCCCCAGACCTGGAATTTTTCTCAGCCCTTTACAAATGCCAGGAGTTGAACTGAG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75417481 115 - 133195287 TGAAATTTCAAGTGAAGTCACTCTCTCCA--CCCCCA--AGAGAAAAGTCACGGAGTACCAGTGCCCCCAGACCTGGAATTTTTCTCAGCCCTTTACAAATGCCAGGAGTTGAACTGAG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73282002 115 - 125196307 TGAAATTTCAAGTGAAGTCACTCTCTCCG--CCCCCA--AGAGAAAAGTCACGGAGTACCAGTGCCCCCAGACCTGGAATTTTTCTCAGCCCTTTACAAATGCCAGGAGTTGAACTGAG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72114354 117 - 125710982 TGAAATTTCAAGTGAAGTCACTCTCTCCA--CCCCCAAGAGAGAAAAGTCACGGAGTACTAGTGCCCCCAGACCTGGAATTTTTCTCAGCCCTTTACAAATGCCAGGAGTTGAACTGAG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75573663 119 - 121768101 TGAAGTTTCAAGTGAAGTCACTCTCTCCACCCCCCCAAGAAAGAAAAGTCACGGAGTGCCAGTGCCCCCAGACCTGGAATTTTTCTCAGCCTTTTACAAATGCCAGGAGTTGAACTGAG i calJac3.chr12 C 0 C 0 s mm10.chr14 24176813 112 + 124902244 TGACACTTTGACTGAGGTCATTCT---CA--CCCCCA-GAGAGAATGGTCACGGAGTACTAGTG-CCCTGGGCCTGGAATGTTTCTCAGCCTTTAACAAATGCCAGAAGTTGAGCTGAG i mm10.chr14 C 0 C 0 s canFam3.chr4 27731515 114 + 88276631 TGAAGTTTCGAGTGAGGTCATCCGCACCA--CTC---AAAGAGGAAAGTCACCGAGTGCCAGTGCCCCCGGACCTGGAATTTTTCTCAGCCTCCCACCAACACCAGAAGTTGATCTGAG i canFam3.chr4 C 0 C 0 e panTro4.chr10 76458579 473 + 133524379 M a score=2465639.000000 s hg38.chr10_KI270825v1_alt 81108 718 + 188315 GACTTCATGCCCTCCACTCCACTAGAAACAACAGCATATTTCTCCCACAGTCAAGCCACATTAATTTTTTAAaataataaaaacaaaacaatgccaggataacagcata--------aaga-----------ggccttaacgatcatttagtcaaaccgcctcatttcacagatacgaa-cagtacagccctgtgaCAAGGTCAT-----CAAGTTCGCTCGAAGAGCACAGCTCTGTCCTTCCAGGCCGGGGGACATCTTCCACACAGGCAG-CCTGCAAATCAGAGCCCATGGCTCCAGACcagcaattctc--ag--tgtgctccataga-caccggttctgcatggagctccattacccccaaaa------------------------aagtatattatctgatgacttatgtttgggaaactctgcatcttggccccctcttggagagtctgtctactgcacaacaccacgctga--aggctctgagaagtcctgcagcagagacatctgtctgggttcaacctggcaatgctcaaacctatttatccccaaagagcacttttcatgtgaaactgctacatgccccagagaactggtgattcacaggcacatcctctacaaaacactgTTTGAGGGCATATAT------------------------------------------------------------------CACATCTCTAAAGA----------TGAC-----AGAAGACAC-ATGCCCCAGATA---ATTAACTTTCCTATTTGCTAGGTGGGTGACTGCCACAGAGGGG-AGAGGCACATGACAGTGACCAAAGAAACAGGATGCTCAGAACAC s panTro4.chr10 76459057 718 + 133524379 GACTTCATGCCCTCCACTCCACTAGAAACAACAGCATATTTCTCCCATAGTCAAGCCACAGTAATTTTTTAAaataataaaaacaaaacaatgccaggataacagcata--------aaga-----------ggccttaacgatcatttagtcaaaccgcctcatttcacagatacgaa-cagtacagccctgtgaCAAGGTCAT-----CAAGTTCGCTCGAAGAGCACAGCTCTGTCCTTCCAGGCCGGGGGGCATCTTCCACACAGGCAG-CCTGCAAATCAGAGCCCATGGCTCCAGACcagcaattctc--ag--tgtgctccataga-caccggttctgcatggggctccattacccccaaaa------------------------aagtatattatctgatgacttatgtttgggaaactctgcatcttggccccctcttggagagtctgtctactgcacaacaccatgctga--aggctctgagaagtcctgcagcagagacatctgtctgggttcaacctggcaatgctcaaacctatttatccccaaagagcacttttcatgtgaaactgctacacgccccagagaactggtgattcacaggcacatcctctacaaaacactgTTTGAGGGCATATAT------------------------------------------------------------------CACATCTCTAAAGA----------TGAC-----AGAAGACAC-ATGCCCCAGATA---ATTAACTTTCCTATTTGCTAGGTGGGTGACTGCCACAGAGGGG-AGAGGCACATGACAGTGACCAAAGAAACAGGATGCTCAGAACAC i panTro4.chr10 M 473 C 0 s ponAbe2.chr10 76121724 718 - 133410057 GACATCATGCCCTCCACTCCACTAGAAACAACAGCATATTTCTCCCACAGTCAAGCCACATTAATTTTTTAAaataataaaaacaaaacaatgccaggataacagcata--------aaga-----------ggccttaacgatcatttagtcaaaccgcctcatttcacagatacgaa-cagtacagccctgtgaCAAGGTCAT-----CAAGTTCGCTCGAAGAGCACAGCTCTGTCCTTCCAGGCGGGGGGGCATCTTCCACACAGGCAG-CCTGCAAATCAGAGCCCATGGCTCCAGACCAGCAATTCTC--AG--TGTGCTCCATAGA-CACCGGTTCTGCATGGAGCTCCATTACCCCCAAAA------------------------AAGTATATTATCTGATGACTTATGtttgggaaactctgcatcttggccccctcttggagagtctgtctactgcacaacaccacactga--aggctctgggaagtcctgcagcagagacatctgtctgggttcaacctggcaatgctcaaacctatttatccCCAAAGAGCACTTTTCACGTCAAACTGATACATGCCCCAGAGAACTGGTGATTCACAGGCACATCCTCTACAAAACACTGTCTGAGGGCATATAT------------------------------------------------------------------CACATCTCTAAAAA----------TGAC-----AGAAGAAAC-ATGCCCCAGATA---ATTAACTTTCCTATTTGCTAGGTGGGTGACTACCACAGAGGGG-AGAGGCACATGGCAGTGACCAAAGAAACAGGATGCTCAGAACAC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35064312 716 + 104879549 GACATCATGCCCTCCACTCCACTAGAAACAACAGCATATTTCTCCCACAGTCAAGCCACATTAATTTTTTAAaataataaaaacaaaacaatgccaggataacagcata--------aaga-----------ggccttaacgatcatttagtcaaaccgcctcatttcacagttacgaa-cagtacagccctgtgaCAAGGTCAT-----CAAGTTCGCTCGAAGAGCACAGCTCGGTCCTTCCAGGCCGGGGGGCATCTTCCACACAGGCAG-CCTGCAAATCAGAGCCCATGGCTCCAGACcagccattctc--ag--tgtgctccataga-caccggttctgcatggagctccattacccctaaaa------------------------aagtatattatctgatgacttatgtttgggaaactctgcatcttggccccctcttggagag--tgtctactgcacaacaccacactgaggaggctctgagaagtcctgcagcagagacatctgtctgggttcaacctggcaatgctcaaacctatttatccccaaagagcacttttcatgtgaaactgatacatgccccagaaaactggtgattcacaggcacatcctctgcaaaacactgTTTGAGGGCATATAT------------------------------------------------------------------CACATCTCTAAAGA----------TGAC-----AGAAGACAC-ATGCCCCAGATA---ATTAACTTTCCTATTTGCTAGGTGGGTGACTGCCACAGAGGGG-AGAGGAGCATGGCAGCGACCAA--GAATATGATGCTCAGAACAC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73856301 718 - 130959383 GACATTATGCCCTCCGCTCCACTAGAAACAACAGCGTATTTCTCCCACAGTCAAGCCACATTAATTTTAAAAaacaataaaaacaaaacaatgccaggataacagcata--------aaga-----------ggccttaacgatcatttagtcaaaccgcctcatttcacagatacgaa-cagtacagccctgtgaCAAGGTCAT-----CAAGTTCGCTCAAAGAGCACAGCTCGGTCCTTCCAGGCCGGGGGGCATCTTCCACACAGGCAG-CCTGCAAATCACAGCCCATGGCTCCGGACcagcaattctc--ag--tatggtccataga-cactggttctccatggagctccatgacccaaaaaa------------------------aagtatattatctgattatttctgtttgggaaactctgcatcttggctgcctcctggagagtctacctactgcacaccaccacaccga--aggctctgagaagtcctgcagcagagacatctgtctgggttcaacctggcaatgctcaaacctatttatcgccagagagcacttttcatgtgaaactgataaatgctccagagaactggtgattcacaggcacatactctacaaaacactgTTTGAGGGCATATAT------------------------------------------------------------------CACATCTCTAAAGA----------TAAC-----AGAAGACAC-ACGCCCCAGAGA---ATTAACTTTCCTATTTGCTAGGTGGGTGACTGCCACAGAGGGG-AGAAGCACATGGCAGGGACCAAAGAAACAGGATGCTCAGAACAC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75417596 718 - 133195287 GACATTATGCCCTCCGCTCCACTAGAAACAACAGCGTATTTCTCCCACAGTCAAGCCACATTAATTTTAAAAaacaataaaaacaaaacaatgccaggataacagcata--------aaga-----------ggccttaacgatcatttagtcaaaccgcctcatttcacagatacgaa-cagtacagccctgtgaCAAGGTCAT-----CAAGTTCGCTCAAAGAGCACAGCTCGGTCCTTCCAGGCCGGGGGGCATCTTCCACACAGGCAG-CCTGCAAATCACAGCCCATGGCTCCAGACcagcaattctc--ag--tatggtccataga-cactggttctacatggagctccatgacccaaaaaa------------------------aagtatattatctgattatttctgtttgggaaactctgcatcttggctgcctcctggagagtctacctactgcacaccaccacaccga--aggctctgagaagtcctgcagcagagacatctgtctgggttcaacctggcaatgctcaaacctatttatcgccagagagcacttttcatgtgaaactgataaatgctccagagaactggtgattcacaggcacatactctacaaaacactgTTTGAGGGCATATAT------------------------------------------------------------------CACATCTCTAAAGA----------TAAC-----AGAAGACAC-ACGCCCCAGAGA---ATTAACTTTCCTATTTGCTAGGTGGGTGACTGCCACAGAGGGG-AGAAGCACATGGCAGGGACCAAAGAAACAGGATGCTCAGAACAC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73282117 718 - 125196307 GACATTATGCCCTCCGCTCCACTAGAAACAACAGCGTATTTCTCCCACAGTCAAgccacattaattttaaaaaacaataaaaacaaaacaatgccaGGATAACAGCATA--------AAGA-----------GGCCTTAACGATCATTTAGTCAAACCGCCTCATTTCACAGATACGAA-CAGTACAGCCCTGTGACAAGGTCAT-----CAAGTTCGCTCGAAGAGCACAGCTCGGTCCTTCCAGGCCGGGGGGCATCTTCCACACAGGCAG-CCTGCAAATCACAGCCCATGGCTCCAGACCAGCAATTCTC--AG--TATGGTCCATAGA-CGCCGGTTCTGCATGGAGCTCCATGACCCaaaaaa------------------------aaGTATCTTATCTGATGATTTACGTTTGGGAAACTCTGCATCTTGGCTGCCTCTTGGAGAGTCTATCTactgcacaccaccacactga--aggctctgagaagtcctgcagcagAGACATCTGTCTGGGTTCTACCTGGCAATGCTCAAACCTATTTATCGCCAGAGAGCACTTTTCATGTGAAACTGATAAATGCTCCAGAGAACTGGTGATTCACAGGCACATACTCTACAAAACACTGTTTGAGGGCATATAT------------------------------------------------------------------CACATCTCTAAAGA----------TAAC-----AGAAGACAC-ACGCCCCAGAGA---ATTAACTTTCCTATTTGCTAGGTGGGTGACTGCCACAGAGGGC-AGAGGCACATGGCAGGGACCAAAGAAACAGGATGCTCAGAACAC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72114471 718 - 125710982 GACATCATGCCCTCCGCTCCACTAGAAACAACAGCGTATTTCTCCCACAGTCAAGCCACATTAATTTTAAAAaacaataaaaacaaaacaatgccaggataacagcata--------aaga-----------ggccttaacgatcatttagtcaaaccgcctcatttcacagatacgaa-cagtacagtcctgtgaCAAGGTCAT-----CAAGTTCGCTCGAAGAGCACAGCTCGGTCCTTCCAGGCCGGGGGGCATCTTCCACACAGGCAG-CCTGCAAATCACAGCCCATGGCTGCAGACcagcaattctc--ag--tatggtccataga-cgccggttctgcatggagctccatgaccccaaaaa------------------------aagtatattatctgatgatttatgtttgggaaactctgcatcttggctgcctcctggagagtctatctactgcacaccaccacactga--aggctctgagaagtcctgcagcagagacatctgtctgggttcagcctggcaatgctcaaacctatttatcgccagagagcacttttcatgtgaaactgataaatgctccagagaactggtgattcacaggcacatactctacaaaacactgTTTGAGGGCATATAT------------------------------------------------------------------CACATCTCTAAAGA----------TAAC-----AGAAGACAC-ACGCCCCAGAGA---ATTAACTTTCCTATTTGCTAGGTGGGTGACTGTCACAGAGGGG-AGAGGCACATGGCAGGGACCAAAGAAACAGGATGCTCAGAACAC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75573782 743 - 121768101 GACATCATGCCCTCTGCTCCGCTAGAAACAACAGCATATTTCTCCCACAGTCAAGCCGCATTAGTTTTTAAAAATAACAAAAACAAAACAATGCCaggataacagcatatgagagataaga-----------ggccttaatgatcatttagtcaaactgcctcattttacagatacgaa-cagtacag-ccTGTGACAAGGTCAC-----GAAGTTCACTCAAAAAGCAAAGCTTGGTCGTTCCAAGCCAGGGGGCATCTTCCACATGGGCAG-CCTGGAAATCAGAG-CCATGGCT-CAGACCAGCTTTTCTC--AG--TGTGCTCCTTAGA-CACAGGTTCTGCTCAGAGCTCCATTACAAaaaaaaaaaaacaacaacaaaaaaaaaaacaaGTATATTCtcagataactt--gcttgggaaactctgcatcttggctccctcttggagagtctatctactgtacaccaccacactga--aggctctgacaagtcctgcagcagagacatctgtctaggtttaacctggcaatgctcaaaccaatttatccccagcaagcacttttcatgtgaaaccgataaatgctccggaggactggtgattcacaggcacgtactctac-aaacactgTTTGAGGGCATCTAT------------------------------------------------------------------CACATCTCTAAAGA----------TGAT-----AGAAGACAC-ATGCCCCAGATA---ACTGACTTTCCTATTTGCTAGGTGGGCGACTGCCATGGCGGGGAAGAGACATATGGCAGGGACCGAACAAAT--GATGCTCAGAACGC i calJac3.chr12 C 0 C 0 s mm10.chr14 24176925 611 + 124902244 GACTGCGTGCTCTCTACTCTACTAGAAAGAACAGCACATTTCTCCTATAATGAGGCTACATTACTTTGGGGAAAACACACACAC-ATATAACAACAGAATCACAGCATA--------GGGAAAGACAAACGTGGTCTC-ATGATGGCTTATAACAATCACTTCATTTTATAGATAAGACTTAATACAGCCGTGCAATATGGGCACCTGAACAAGGTCAC-----GAGACAAACTCAGTCCTCGTAC-CTGGAAGGCACCTTGCACCCAGACAA-TATGCCTGCCACA----------CTAGAGCAGCATTTCCT--GAGCTGTGTGCCTGAGAGCAGCTGTCCTTCA-GGAGCTCCAGCACCAAACAAC------------------------AA-----------------------------------------TAGC-------------------------CACATCCCC---------TGGC---------TCCTGCAGCAGAGACACCAGTCTGGGTTCACTCTGGTGACTGT-ACACCTGTTTATA---------------TCATCGAAAGCCCACACGTG--------------------GCAGGAATGTGCTGCTTGCACTACTGTCC-AGGGTGGGAAT------------------------------------------------------------------CACATAGCTAAAACCAATGGTTCTTAAT-----AAAAAATGA-AATTTCAAGGAACATACTGCCTTTCCCATTTGCAAGGTGCATAGCCACTACGGAGAA--AGAGGTTTA-GAGGGAAATCCAAGAGGCAGGATACTCAGGACAC i mm10.chr14 C 0 C 0 s canFam3.chr4 27731629 772 + 88276631 GACTTCATGCCCTCGGCTCTACTAGAAATAACAGTGTATTTCTCCCACAGCCAAGTAACATTGTTTTTT---AAGAATAAAAAGAAAACaatgctagaaacacagcatatgagaggtaaga---------ctggccttaatgatcatttagtctgaccacctcatttcccagatacaga-cgataaggcctggtg--tgggtgac-----tga------tgcaagatgacaGCTCGGTCCCTCCAGGCCAGGAGCCACCTTCCATAGAGGCAACCCTGCGAGCCAGAACCCACAGCTCTCCAGcagcacttctcaaag--catgttctttagaataccaattcttcatggaactccatta----aaaag------------------------aagtgtgttctctaatggcttaca-ttgggaaacact--------gtcccgtcctggag----cagctagtgcagggtaccagagtga--aggctctgagaagtcctgcaatgtagactcctgtctgagtataattcagcaattcctaatcctttctatctccagagaacaccttgcatgggatgccaatgaatgctccagggaactggtgttccataggaacacacgttacgaaatgctgTTTGAGGGCAGGTGtatatatagaaagaaatacatacagatatacagagatacatgtacacacacacacacagattatatatacatTTTTAAAAA----------TGACATTTTAGAAGAAACAATGCTTAGGGCA---AATAA---TTCTATTTGCTGGGTGGGTGGGTGACACAGAGGGA-AGAGGCTTGCG-CGGAGACCTAAGAAATAGGATGGTCAGAACAC i canFam3.chr4 C 0 C 0 a score=19665.000000 s hg38.chr10_KI270825v1_alt 81826 5 + 188315 ACCAG s panTro4.chr10 76459775 5 + 133524379 ACCAG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76122442 5 - 133410057 ACCAG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35065028 5 + 104879549 ACCAG i nomLeu3.chr18 C 0 M 100 s rheMac3.chr9 73857019 5 - 130959383 ACCAG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75418314 5 - 133195287 ACCAG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73282835 5 - 125196307 Accag i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72115189 5 - 125710982 ACCAG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75574525 5 - 121768101 ACCAG i calJac3.chr12 C 0 C 0 s mm10.chr14 24177536 5 + 124902244 AGCAG i mm10.chr14 C 0 C 0 e canFam3.chr4 27732401 0 + 88276631 C a score=11259.000000 s hg38.chr10_KI270825v1_alt 81831 5 + 188315 TATTT s panTro4.chr10 76459780 5 + 133524379 TATTT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76122447 5 - 133410057 TATTT i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73857024 5 - 130959383 TATTT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75418319 5 - 133195287 TATTT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73282840 5 - 125196307 cattt i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72115194 5 - 125710982 TATTT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75574530 5 - 121768101 TATTT i calJac3.chr12 C 0 C 0 s mm10.chr14 24177541 5 + 124902244 GATGC i mm10.chr14 C 0 I 127 e canFam3.chr4 27732401 0 + 88276631 C e nomLeu3.chr18 35065033 100 + 104879549 M a score=238028.000000 s hg38.chr10_KI270825v1_alt 81836 110 + 188315 ATTAAGTATtgtgcagagcagttaacacagcagacccgagatttctacacgctcagaaaggcccgcttgcaaggctaaccactgaatggtgtccgtgaacCCGAAGGTAA s panTro4.chr10 76459785 110 + 133524379 ATTAAGTATtgtgcagagcagttaacacagcagacctgagatttctacacgctcagaaaggcccgcttgcaaggctaaccactgaatggtgtccgtgaacCCGAAGGTAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76122452 110 - 133410057 ATTAAGTATtgtgcagagcagttaacacagcagacctgagatttctacacgctcagaaaggcccgcttgcaaggctaaccactgaatggtgtccgtgaacctgaaGGTAA i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73857029 110 - 130959383 ATTAAGCATTGTGTAGCGCagttaatacagcagacctgaaatttctacatcctcagaaaggcccgcttgcaaggctaaccactgaatggtgtctgtgaacctgaaGGTAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75418324 110 - 133195287 ATTAAGCATTGTGTAGCGCagttaatacagcagacctgaaatttctacatcctcagaaaggcccgcttgcaaggctaaccactgaatggtgtctgtgaacctgaaGGTAA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73282845 110 - 125196307 attaagcattgtGTAGCGCAGTTAATACAGCAGACCTGAAATTTCTACATCCTCAGACAGGCCCGCTTGCAAGGCTAACCACTGAATGGTGTCTGTGGACCTGAAGGTAA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72115199 110 - 125710982 ATTAAGCATTGTGTAGCGCagttaatacagcagacctgaaatttctacatcctcagaaaggcccgcttgcaaggctaaccactgaatggtgtctgtgaacctgaaGGTAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75574535 97 - 121768101 GTTAAGTGTCGTGCAGATCAGTTAACAGAGCA-------------CAAatctttagaaagggtcgcttgcaaggctgaccactgaatggtgtctgggaacCCACGGGTAA i calJac3.chr12 C 0 C 0 e canFam3.chr4 27732401 0 + 88276631 C e mm10.chr14 24177546 127 + 124902244 I e nomLeu3.chr18 35065033 100 + 104879549 M a score=270710.000000 s hg38.chr10_KI270825v1_alt 81946 112 + 188315 ACAGGGATGTTCAGATGGGAAGAGGGAGCCACGATTCCCAAGACACATTCAGT-GTC-----AAAAAAAAATGTTTCCTGG-----TCAGAAGCATTTTTTGATTGAAAA--------------------AGCACAATAACTC s panTro4.chr10 76459895 112 + 133524379 ACAGGGATGTTCAGATGGGAAGAGGGAGCCACGATTCCCAAGACAGATTCGGT-GTC-----AAAAAAAAATGTTTCCTGG-----TCAGAAGCATTTTTTGATTGAAAA--------------------AGCACAATAACTC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76122562 112 - 133410057 ACAGGGATGTTCAGATGGGAGGAGGGAGCCACAATTCCCAAGACAGATTCGGT-GTC-----AAAAAACAATGTTTCCTGG-----TCAGAAGCATTTTTTGATTGAAAA--------------------AGCACAATAACTT i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73857139 117 - 130959383 ACAGGGATGTTCAGATGGGAGGAGGGAGCCATGATTCCCAAGACAGATTCGGT-GTCAAAAAAAAAAAAAAGGTTTCCTGG-----TCAGAAGCATTTTTTGATTGAAAA--------------------AGCATCGTAACTC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75418434 116 - 133195287 ACAGGGATGTTCAGATGGGAGGAGGGAGCCATGATTCCCAAGACAGATTCAGT-GTC-AAAAAAAAAAAAAGGTTTCCTGG-----TCAGAAGCATTTTTTGATTGAAAA--------------------AGCATCGTAACTC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73282955 115 - 125196307 ACAGGGATGTTCAGATGGGAGGAGGGAGCCATGATTCCCAAGACAGATTcattagtc---aaaaaaaaaaaggtttcctgG-----TCAGAAGCATTTTTTGATTGAAAA--------------------AGCACCGTAACTC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72115309 114 - 125710982 ACAGGGATGTTCAGATGGGAGGAGGAAGCCATGATTCCCAAGACAGATTCGGT-GTC---AAAAAAAAAAAGGTTTCCTGG-----TCAGAAGCATTTTTTGATTGAAAA--------------------AGCACCGTAACTC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75574632 110 - 121768101 ACAGGGATGTTCAGACGGGAGGAGGGAACCACGATTCCTAAGACAGATTCGCT-GTC-------AAAACAGAGTTCCCTGG-----TCAGAAGCATTTTTTGACTGAAAA--------------------AGAACAGTAACTC i calJac3.chr12 C 0 C 0 s canFam3.chr4 27732401 134 + 88276631 CCAGAGCTATTCGGATGGGAGGAAGGAA-CACAATTCCCAAGCCACATGGAGT-GCC-------AACAAAATGTTCCCCAAATACCCCCAAAATATTTTTTGAATAAAAAGGCAGGGAAAAAAAAAAAAGGGCAGAGTCACTA i canFam3.chr4 C 0 C 0 e mm10.chr14 24177546 127 + 124902244 I e nomLeu3.chr18 35065033 100 + 104879549 M a score=1430191.000000 s hg38.chr10_KI270825v1_alt 82058 430 + 188315 ---------------------------------ATGCTGTTCTCATCCCCTGGTGGTGGCTGGGAACCTTATAG---------GACCCA----------TTTGCCCCCGG-C--------CCCCGATGGCCCT-----------------------------------AGCCCT-ACCTCCTCAGGGAGAGGGCGCACTGGTGCTGCAGCTGGATGGCCGTGTCCCTCTGCTGGGTCAGCATCTCTGTCTGCTTCAGCAACCGCTGGTTCTCCTCCCCCAGCTGCTCCAGGCGGCTCAGGTCTGCATTGTGGATGGCGACTTTCTCACTGTACCTCTTCCGAAGGGCGTCATAGTCCTTCTTGACCACCTCCAACTTGTCCATGGCCGTGTCATACAGTTTGTTGAGAATCTCGGATGACCCGTTGTGCTTCAACACCTGGAGACCAGACAGTTTCAC--TTACCAAGGGTCTGTGGG-AGGTGGCGGAGGAGACCTC--CC-ACTCTCACTTTTGTCTATCTGAGGGTGAGA s panTro4.chr10 76460007 425 + 133524379 ---------------------------------ATGCTTTTC-----CCCTGGTGGTGGCTGGGAACCTTATAG---------GACCCA----------TTTGCCCCCGG-C--------CCCCCATGGCCCT-----------------------------------AGCCCT-ACCTCCTCAGGGAGAGGGCGCACTGGTGCTGCAGCTGGATGGCCGTGTCCCTCTGCTGGGTCAGCATCTCTGTCTGCTTCAGCAACCGCTGGTTCTCCTCCCCCAGCTGCTCCAGGCGGCTCAGGTCTGCATTGTGGATGGCGACTTTCTCACTGTACCTCTTCCGAAGGGCGTCATAGTCCTTCTTGACCACCTCCAACTTGTCCATGGCCGTGTCATACAGTTTGTTGAGAATCTCGGATGACCCGTTGTGCTTCAACACCTGGAGACCAGACAGTTTCAC--TTACCAAGGGTCTGCGGG-AGGTGGCGGAGGAGACCTC--CC-ACTCTCACTTTTGTCTATCTGAGGGTGAGA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76122674 430 - 133410057 ---------------------------------GTGCTGTTCTCATCCCCTGGAGGTGGCTGGGAACCTTATAG---------GACCCA----------TTTGCCCCCAG-C--------CCCCCGTGGCCCT-----------------------------------AGCCCT-ACCTCCTCAGAGAGAGGGCGCACTGGTGCTGCAGCTGGATGGCCGTGTCCCTCTGCTGGGTCAGCATCTCTGTCTGCTTCAGCAACCGCTGGTTCTCCTCCCCCAGCTGCTCCAGGCGGCTCAGGTCTGCGTTGTGGATGGCGACTTTCTCACTGTACCTCTTACGAAGGGCGTCGTAGTCCTTCTTGACCACCTCCAACTTGTCCATGGCTGTGTCATATAGTTTGTTGAGAATCTCGGATGACCCGTTGTGCTTCAACACCTGGAGACCAGACAGTTTCAC--TTACCAAGGGTCTGGGGG-AGGTGGTGGAGGAGACCTC--CC-ACTCTCATTTTTGTCTATCTGAGGGTGAGA i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73857256 430 - 130959383 ---------------------------------ATGCTCTTCTCATCACCTGGGGGTGGTTGGGAACCTTACAG---------GACCCA----------TTTGCCCCCAG-C--------CCCCCGTGGCCCT-----------------------------------AGCCCT-ACCTCCTCAGGGAGAGGGCACACTGGTGCTGTAGCTGGATGGCCGTGTCCCTCTGCTGGGTCAGCATCTCCGTCTGCTTCAGCAGCCGCTGGTTCTCCTCCCCAAGCTGCTCCAGGCGGCTCAGGTCTGCATTGTGGATGGCGACTTTCTCACTGTACCTCTTCCGCAGGGCGTCATAGTCCTTCTTGACCACCTCCAACTTGTCCATGGCCGTGTCGTATAGCTTGTTGAGAATCTCGGATGACCCGTTGTGCTTCAACACCTGGAGACCAGACAGTCCCAC--TTACCAAGGGTCTGGGGG-AGGTGGTGGAGGAGACCTC--CC-ACTCTCACTTTTGTCTGTCTGAGGGTGGGA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75418550 430 - 133195287 ---------------------------------ATGCTCTTCTCATCACCTGGGGGTGGTTGGGAACCTTACAG---------GACCCA----------TTTGCCCCCAG-C--------CCCCCATGGCCCT-----------------------------------AGCCCT-ACCTCCTCAGGGAGAGGGCACACTGGTGCTGTAGCTGGATGGCCGTGTCCCTCTGCTGGGTCAGCATCTCCGTCTGCTTCAGCAGCCGCTGGTTCTCCTCCCCAAGCTGCTCCAGGCGGCTCAGGTCTGCATTGTGGATGGCGACTTTCTCACTGTACCTCTTCCGCAGGGCGTCATAGTCCTTCTTGACCACCTCCAACTTGTCCATGGCCGTGTCGTATAGCTTGTTGAGAATCTCGGATGACCCGTTGTGCTTCAACACCTGGAGACCAGACAGTCCCAC--TTACCAAGGGTCTGGGGG-AGGTGGTGGAGGAGACCTC--CC-ACTCTCACTTTTGTCTGTCTGAGGGTGGGA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73283070 430 - 125196307 ---------------------------------ATGCTCTTCTCATCACCTGGGGGTGGTTGGGAATCTTACAG---------GACCCA----------TTTGcccccag-c--------cccccGTGGCCCT-----------------------------------AGCCCT-ACCTCCTCAGGGAGAGGGCACACTGGTGCTGTAGCTGGATGGCTGTGTCCCTCTGCTGGGTCAGCATCTCCGTCTGCTTCAGCAGCCGCTGGTTCTCCTCCCCAAGCTGCTCCAGGCGGCTCAGGTCTGCATTGTGGATGGCGACTTTCTCACTGTACCTCTTCCGCAGGGCGTCATAGTCCTTCTTGACCACCTCCAACTTGTCCATGGCCGTGTCATACAGCTTGTTGAGAATCTCGGATGACCCGTTGTGCTTCAACACCTGGAGACCAGACAGTCCCAC--TTACCAAGGGTCTGGGGG-AGGTGGTGGAGGAGACCTC--CC-ACTCTCACTTTTGTCTGTCTGAGGGTGGGA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72115423 430 - 125710982 ---------------------------------ATGCTCTTCTCATCACCTGGGGGTGGTTGGGAACCTTACAG---------GACCCA----------TTTGCCCCCAG-C--------CCCCCGTGGCCCT-----------------------------------AGCCCT-ACCTCCTCAGGGAGAGGGCACACTGGTGCTGTAGCTGGATGGCCGTGTCCCTCTGCTGGGTCAGCATCTCCGTCTGCTTCAGCAGCCGCTGGTTCTCCTCCCCAAGCTGCTCCAGGCGGCTCAGGTCTGCATTGTGGATGGCGACTTTCTCACTGTACCTCTTCCGCAGGGCATCATAGTCCTTCTTGACCACCTCCAACTTGTCCATGGCCGTGTCATACAGCTTGTTGAGAATCTCGGATGACCCGTTGTGCTTCAACACCTGGAGACCAGACAGTCCCAC--TTACCAAGGGTCTGGAGG-AGGTGGTGGAGGAGACCTC--CC-ACTCTCACTTTTGTCTGTCTGAGGGTGGGA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75574742 431 - 121768101 ---------------------------------ATGCTGTTCTCATCCCCCGGCGGTGGCTGGGAACCCTGCAG---------GACCCA----------TTTGCCCCCGGCC--------CCCCCATGGCCCC-----------------------------------AGGCCT-ACCTCCTCAGGGAGAGGGCGCACTGGTGCTGCAGCTGGATGGCCGTGTCCCTCTGCTGGGTCAGCATCTCTGTTTGCTTCAGCAGCCGCTGGTTCTCCTCCCCCAGCTGCTCCAGGCGGCTCAGGTCTGCGTTGTGGATGGCGACTTTCTCACTGTACCTCTTGCGCAGGGCATCATAATCCTTCTTCACCACCTCCAGTTTGTCCATGGCCGTGTCGTACAGCTTGTTAAGGATCTCAGATGACCCGTTGTGTTTCAACACCTAGGGACCAGAGAGTCCCAC--TTACCAAGGGTCTGGGGG-AGGTGGTGGAGGAGACCTC--CCAAATCTCAC-TTTATCTGCCTGAGGGTGGAA i calJac3.chr12 C 0 C 0 s mm10.chr14 24177673 393 + 124902244 ---------------------------------ATCCCGTTTACCACCCCTGAC------------------------------ACACA----------CTGCCCCGTGG-C--------CAGCCTGGGCT----------------------------------------CCT-ACCTCCTCAGGGAGAGTGCGCACTGGTGCTGTAACTGGATGGCCGTGTCCCTCTGCTGGGTCAGCATCTCCGTCTGCTTCTGCAGACGCTGGTTCTCCTCCCCCAGCTGCTCCAGGCGGCTCAGGTCCGAGTTGTGCATGGCAACCTTCTCGCTGTATCTCTTCCGCAGGGCATCGTAGTCCTTCTTGACTACCTCCAGCTTGTCCATGGCCGTGTCGTACAGCTTGTTGAGGATCTCTGATGAGCCATTGTGCTTCAGCACCTGGGGACCCCAAGGACCCACGTTTACCAAAGGGCAAGATG-----GGCAGAACAGGTATC--TC--------CCTTTTTCTA--TGAAAGCAAGA i mm10.chr14 I 127 I 78 s canFam3.chr4 27732535 528 + 88276631 GAGCCCCCCTCCCtttttctttcttttcttttttttttttttttACCCCCTGCAAGTGGCTGGGAGCCTGGCTGCCAGCAATAAGCCCATAAAGGAGAGTGGGCCTGCGG-CAAAGGAAGCCCGTGTGGCCCTCTGGCCATTCCCCGCACACGGGGGACGGGCAGGGCAGCTCTCACCTCCGCAGGGAGAGGGCACACTGGTGCTGCAGCTGGATGGCCGTGTCCCTCTGCTGCGTCAGCATCTCCGTCTGCTTCAACAGACGCTGGTTCTCTTCCTCCAGCTGCTCCAGGCGGCTCAGGTCGGAGTTGTGGATGGCGACTTTCTCGCTGTACCTCTTCCGCAGGGCATCGTAGTCCTTCTTGACCACCTCCAGCTTGTCCATGGCCGTGTCATACAGCTTATTGAGAATCTCTGATGACCCGTTGAGCTTCAACACCTGGGGACCAGAGAGTCACAC--TTACCAAGGGCCTGAGGACAGGAGGTGGGACAAACTCCCACC-ACTCTC-CGTCTGTCTGTCTGCGAGTAGTA i canFam3.chr4 C 0 C 0 e nomLeu3.chr18 35065033 100 + 104879549 M a score=135079.000000 s hg38.chr10_KI270825v1_alt 82488 71 + 188315 CTGATGACAAGGCGGTTGGGGGG--AGGGGGTTACCCTAAAGCTTTTGAGAGTCTTGAGGTCCAATTCTCCAG s panTro4.chr10 76460432 69 + 133524379 CTGATGACAAGGCGGT--GGGGT--GGGGGGTCACCCTAAGGCTTTTGAGAGTCTTGAGGTCCAATTCTCCAG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76123104 60 - 133410057 CTGATGAC-----------GGCG--GGGGGGTCACCCTAAGGCTTTTGAGAGTCTTGAGGTCCAATCCTCCAG i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73857686 61 - 130959383 CTGATGAC----------AAGGT--GGGGGGTCACCCTAGGGCTTTTGAGAGTCTTGAGGTCCAATTCTCCAG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75418980 61 - 133195287 CTGATGAC----------AAGGT--GGGGGGTCACCCTAGGGCTTTTGAGAGTCTTGAGGTCCAATTCTCCAG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73283500 61 - 125196307 CTGATGGC----------AAGGT--GGGGGGTCACCCTAGGGCTTTTGAGAGTCTTGAGGTCCAATTCTCCAG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72115853 62 - 125710982 CTGATGAC----------AAGGT-GGGGGGGTCACCCTAGGGCTTTTGAGAGTCTTGAGGTCCAATTCTCCAG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75575173 63 - 121768101 CTGATGAC----------AAAGTTGGGGGGGTCACCCTAGGGCTTTTGAGGGTCTCGAGGTCCACTTCTCCAA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27733063 48 + 88276631 CTGGTGAC----------CGAGG--AGGGAG-------------ATTAGGCATCCTAAGGTCTGATTCCACAG i canFam3.chr4 C 0 C 0 e mm10.chr14 24178066 78 + 124902244 I e nomLeu3.chr18 35065033 100 + 104879549 M a score=228805.000000 s hg38.chr10_KI270825v1_alt 82559 91 + 188315 GCCCTGCAGTCACACTGGGCTGATTCATTTAGATTCACTCA-----GTCACAACTATT---TACTAAGTATt-------------------gtgcagaacagttaacacagctgacct s panTro4.chr10 76460501 91 + 133524379 GCCCTGCAGTCACACTGGGCTGATTCATTTAGATTCACTCA-----GTCACAACTATT---TACTAAGTATt-------------------gtgcagaacagttaacacagctgacct i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76123164 91 - 133410057 GCCCTGCAGTCAGACTGGGCTGATTCATTTAGATTCACTCA-----GTCACAAGTATT---TACTAAGTATt-------------------gtgcagaacagttaacactgctgacct i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73857747 91 - 130959383 GCCTTGCAGTCACACTGGGCTGATTCATTTAGATTCACTCA-----GTCACAAGTATT---TACTAAGTATt-------------------gtgcagaacagttaacacagctgacct i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75419041 91 - 133195287 GCCTTGCAGTCACACTGGGCTGATTCATTTAGATTCACTCA-----GTCACAAGTATT---TACTAAGTATt-------------------gtgcagaacagttaacacagctgacct i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73283561 91 - 125196307 GCCTTGCAGTCACACTGGGCTGATTCATTTAGATTCACTCA-----GTCACAAGTATT---TACTAAGTATT-------------------GTGCAGAACACTTAACACACCTGACCT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72115915 91 - 125710982 GCCTTGCAGTCACACTGGGCTGATTCATTTAGATTCACTCA-----GTCACAAGTATT---TACTAAGTATt-------------------gggcagaacagttaacacagctgacct i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75575236 93 - 121768101 GCCCTGCAGTCACGCTGGGCTGATTCATTTAGATTCACTCA-----ATCACAAGTATTAAATATTAGGTATT--------------------TGCCGAGCagttaacacagcaggcct i calJac3.chr12 C 0 C 0 s mm10.chr14 24178144 114 + 124902244 GTGCTGTACTCACA-GGGGTTAATCCATTCCTTCTCAAATATTTGTGTTACAGAGAAG---TCCTGAGTACTACGAAGCAAACTATTCTATGTGCAGGAAGACTATAATGGCCAGCCT i mm10.chr14 I 78 C 0 s canFam3.chr4 27733111 79 + 88276631 GCCCTGCACTCACACTGG-----------TCAATTTCCTCA-----TCCACAAATGTT---TCTTAAGtgt--------------------gtagaaaagagcccccgaagcagaccg i canFam3.chr4 C 0 C 0 e nomLeu3.chr18 35065033 100 + 104879549 M a score=3239543.000000 s hg38.chr10_KI270825v1_alt 82650 1073 + 188315 gagacttctatatccttagaaaggcctgcttgcaaggttgaccct--accgaatggcgtctaggaacccgaacagtaaacagttctctaggctgatgtaaaacttttcttctggtgatataagcagctctggtactgagcctgtacaaataaagtggcttatgctgaacacctgctttctactgggagtccagaatctgggtacatggcaggcaga-agttcctacatgaccag-cccccaataagacacttgagcactgagtctctaatgggcctccgtggaggccagcacttcttgtgtgttgttgtgattccatgctggaggaattaagtgcctccggtgaaactccaccaggagaggattcttggaaactcaggcccagtttcccctggactt-tgcctcacgcgcctttc-cccctttgccgactttgctctgtgtactt-ttgttgtaataaatgtcagccattgagtataattacatactgaatcttt----tgagtcctcccagAAAGTGACATAGCC-CAGAATCAGGTTATGTAAATCGGACCTAAAGACTCTCAAAAGCCCTAGGGTGACCCT---------CCATGGTGTAGGGTCCCCCCGCATCCCATGCAagtacctaatatgtctagcactggtctaggggctggtgatgccagacaggacagaaagacgctgtgccctgtgggccttttatcctaat-------ttggagggtgtggacacacagataggccaaataaagtaacttcagagcaaggtaagaacta--tcaagaaaataaaaaataaaacagaataatgggctggagagagccatctgagcagca--------gagtggaggtctgtgagggaggcta-aggc-tgaagaggcttcttgaagaaggcgac-------ttcagaggcaaatgaagaagagcagc------gagagcacactgggcagagaggggggcagggtcaaaggcccagagg---cagg-gcctgcaggcg----tgttctagagaca--ga-----gaggggcaaggcggagtagcaagagcccaatgcaca--------------------------------------gggggaggtgggttcaaa-----------------ggggacctggaga-----------------------------------------------------agt-gggtgtgggcatgggggtg-----------------------------gccatggccgcaggcc s panTro4.chr10 76460592 1075 + 133524379 gagacttctatatccttagaaaggcctgtttgcaaggttgaccct--accgaatggcgtctaggaacccgaacagtaaacagttctctaggctgatgtaaaacttttcttccggtgatataagcagctctggtactgagcctgtacaaataaagtggcttatgctgaacacctgctttctactgggagtccagaatctgggtacatgctaggcaga-agttcctacatgaccag-cccccaataagacacttgagcactgagtctctaatgggcctccgtggaggccagcacttcttgtgtgttgttgtgattccatgctggaggaattaagtgcatccggtgaaactccaccaggagaggattcttggaaactcaggcccagtttcccctggactt-tgcctcacgcgcctttc-cccctttgccgactttgctctgtgtactt-ttgttgtaataaatgtcagccattgagtataattacatactgaatcttg----tgagtcctcccagAAAGTGACATAGCC-CAGAATCAGGTTATGTAAATCGGACCTAAAGACTCTCAAAAGCCCTAGGGTGACCCT---------CCATGGTGTAGGGTCCCCCCGCATCCCATGCAagtacctaatatgtctagcactggtctaggggctggtgatgccagacaggacagaaagacgctgtgccctgtgggccttttatcctaat-------ttggagggtgtggacacacagataggccaaataaagtaacttcagagcaaggtaagaacta--tcaagaaaataaaaaataaaacagaataatgggctggagagagccatctgagcagca--------gagtggaggtctgtgagggaggcta-aggc-tgaagaggcttcttcaagaaggtgac-------ttcagaggcaaatgaagaagagcagc------gagagcacaccgggcagaggggagggcaggggcaaaggcccagagg---cagg-gcctgcaggcg----tgttctagagacaaaga-----gaggggcaaggcggagtagcaagagcccaatgcaca--------------------------------------ggaggaggtgggttcaaa-----------------ggggacctggaga-----------------------------------------------------agt-gggtgtgggcatgggggtg-----------------------------gccatggccgcaggcc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76123255 1074 - 133410057 gagatttctatatccttagaaaggcctgc--------ttgaccct--accgaatggcgtctaggaacccgaacagtaaacagttctctaggctgatgtaaaacttttcttccagtgatataagcagctctggtactgagcctgtacaaacaaagtggcttatgctgaacacctgctttcttctgggagtccagaacctgggtacatgctaggcaga-ggttcctacatgaccag-cccccagtaagacacttgggcactgagtctctaatcggcctctgtggaggccagaacttcttgtgtgttgttgtgattccatgctggaggaattaagtgcatccggtgaaactccaccaggagaggactcttggaaactcaggcccagtttcccccggactt-tgcctcacgcgcctttc-cccctttgccgactttgctctgtgtactt-ttgttgtaataaatgtcagccattgagtataattacatactgaatcttg----tgagtcctcccagAAAGTGACATAGCC-CAGAATCAGGTTATGTAAATCGGACCTGAAGACTCTCAAAAGCCCTAGGGTGACCCT---------CTATGGTGTAGGGTCCCCCCGCATCCCATGCAagtacctaatatgtctagcactggtctaggggctggtgatgccagacaggacagaaagaggctgtgccctgtgggtcttttatcctaat-------ttggagggtgtggacacacagataggccaaataaagtaacttcagagcaatgtaagaacta--tcaagaaaataaaaaataaaacagaataatgggctggagcgagccatctgagcagcc--------gagtggagggctgtgagggaggcta-aggc-tgaagaggcttcttgaagaaggtgacttcagaattcagaggcaaatgaagacgagcagc------gagagcacaccgggcagaggggagggcaggggcaaaggcccagagg---cagg-gcttgcaggcg----tgttctagggacaaaga-----gaggggcaaggcggagtagcaagagcccaaagcaca--------------------------------------gggggaggtaggttcaaa-----------------ggggacctggaga-----------------------------------------------------agt-gggtgtgggcatgggggta-----------------------------gccatggccgcaggcc i ponAbe2.chr10 C 0 I 345 s nomLeu3.chr18 35065133 1079 + 104879549 gagatttctatatgcttagaaagg-ctgcttgcaaggttgacgct--actgaatggtgtctaggaa-ctgaagagtaaacagttctctaggctgatgtaaaacttttcttccagtgatacaagcagctctggtactgagcctgtacaaacaaagtggcttatgctgaa-acctgctttcttctgggagtccagaatctgggtacatgctaggcagg-ggttcctacatgaccagccccccagtaagacacttgggcactgagtctctaatgggcctccgtggaggccagcgcttcttgtgtgttgctgtgattccatgctggaggaattaagtgcatccggtgaaactccaccaggagaggactcctggaaactcaggcccagtttcccctggactt-tgccttacacacctttc-cccctttgccgactttgctctgtgtactt-ttgttgtaataaatgtcagccattgagtataattacatactgaatcttg----tgagtcctcccagaaagtcaTATAGCC-CAGAATCAGGTTATGTAAATCGGACCTACAGACTCTCAAAAGCCCTAGGGTGACCCT---------CAATGGTGCAGGGTCCCCCTGCATCCCATGCAAGTAGCTAatgtgtctagcactgttctaggggctggtgatgccagacaggacagaaagaggctgtgctctgtgggccttttatcctaat-------ttggagggtgtggacacacagataggccaaataaagtaacttcagagcaaggtaagaacta--tcaagaaaataaaaaataaaacagaataatgggctggagagagccatctgagcagca--------gagtggagggctgtgagggaggcta-aggc-tgaagatgcttgttgaagaaggtgacttcagaattcagaggcaaatgaagaagagcagc------gagagcacaccgggcagaggggagggcaggggcaaaggcccagagg---cagg-gcctgc-ggcg----tgttctagggacaaaga-----gaggggcagggtggagtcgcaggagcccaatgcaca--------------------------------------gggggaggtggcttcaaa-----------------ggggacctggaga-----------------------------------------------------agt-gggcatgagcatgcgggtg-----------------------------gccatggccacaggcc i nomLeu3.chr18 M 100 C 0 s rheMac3.chr9 73857838 1071 - 130959383 gagatttctatatccttagaaagacctgcttgcaaggttgaccct--actgaatggtgtctaggaacccaaacagtaaacagttctctaggctgatgtaaaac-tttcttccggtgatataagcagctctggtactgagcccgtacaaacaaagtggcttatgctgaacacctgctttcttctgggagtacagaatctgggtacatgctcggcaga-ggtacccacatgaccag-ccctcagtaagacacttgggcactgagtgtctaacaggcctccgtggaggccagcacttctcgtgtgttgttgggattccattctggaggaattcagtgcatctggtgaaactccaccaggagaggactcttggaaactcgggcccagtttcctctggactt-tgcctcacgcgtcttt--cccctttgccgactttgctctgtgtacgt-ttgttgtaataaatgtcagccattgagtataattacatactgaatcttg----tgagtcctcccagaaagtcacatagcc-cagaatcaggttttgtaaatcGGACCTAAAGACTCTCAAAAGCCCTAGGGTGACCCT---------CCATGGTGTAGGGTACCCTCGCATCCCATGCAaatacctaatatgtctagcactgttctaggtgctggtgatgccagacgggaaagaaagaggttgtgacctgtgggccttttatcctaat-------ttggagggtgtggacat----acaggccaaataaagtaacttcagagcaaggtaagaacta--tcaagaaaagaaaaaataaaacagtataatgggctggagagagccatctgagtagca--------gaggggaggactgtgagggagacta-aggc-tgaagaggcttcttgaagaaggtg-cttcagaattcagaggcaaatgaaga---------------agagcacaccgggcagaggggagggcaggggcaaaggcccagagg---cagg-gcctgcaggtg----tgttctagagataaagagaggggaggggcagggcagagtagcaggagcccagtgcaca--------------------------------------gcgggaggtggattcaaa-----------------ggggacctggaga-----------------------------------------------------agt-gggcgtgggcatgggggtg-----------------------------gccatggctgcagggc i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75419132 1071 - 133195287 gagatttctatatccttagaaagacctgcttgcaaggttgaccct--actgaatggtgtctaggaacccaaacagtaaacagttctctaggctgatgtaaaac-tttcttccggtgatataagcagctctggtactgagcccgtacaaacaaagtggcttatgctgaacacctgctttcttctgggagtacagaatctgggtacatgctcggcaga-ggtacccacatgaccag-ccctcagtaagacacttgggcactgagtgtctaacaggcctccgtggaggccagcacttctcgtgtgttgttgggattccattctggaggaattcagtgcatctggtgaaactccaccaggagaggactcttggaaactcgggcccagtttcctctggactt-tgcctcacgcgtcttt--cccctttgccgactttgctctgtgtacgt-ttgttgtaataaatgtcagccattgagtataattacatactgaatcttg----tgagtcctcccagaaagtcacATAGCC-CAGAATCATGTTTTGTAAATCGGACCTAAAGACTCTCAAAAGCCCTAGGGTGACCCT---------CCATGGTGTAGGGTACCCTCGCATCCCATGCAaatacctaatatgtctagcactgttctaggtgctggtgatgccagacgggaaagaaagaggttgtgacctgtgggccttttatcctaat-------ttggagggtgtggacat----acaggccaaataaagtaacttcagagcaaggtaagaacta--tcaagaaaagaaaaaataaaacagtataatgggctggagagagccatctgagtagca--------gaggggaggactgtgagggagacta-aggc-tgaagaggcttcttgaagaaggtg-cttcagaattcagaggcaaatgaaga---------------agagcacaccgggcagaggggagggcaggggcaaaggcccagagg---cagg-gcctgcaggtg----tgttctagagataaagagaggggaggggcagggcggagtagcaggagcccagtgcaca--------------------------------------gcgggaggtggattcaaa-----------------ggggacctggaga-----------------------------------------------------agt-gggcgtgggcatgggggtg-----------------------------gccatggctgcagggc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73283652 1072 - 125196307 GAGATTTCTATATCCTTAGAAAGACCTGCTTGCAAGGTTGACCCT--ACTGAATGGTGTCTAGGAACCCAAACAGTAAACAGTTCTCTAGGCTGATGTAAAAC-TTTCTTCCGGTGATATAAGCAGCTCTGGTACTGAGCCCGTACAAACAAAGTGGCTTATGCTGAACACCTGCTTTCTTCTGGGAGTACAGAATCTGGGTACATGCTAGGCAGA-GGTACCCACATGACCAG-CCCTCAGTAAGACACTTGGGCACTGAGTGTCTAACAGGCCTCCGTGGAGGCCAGCACTTCTCGTGTGTTGTTGGGATTCCATTCTGGAGGAATTCAGTGCATCCGGTGAAACTCCACCAGGAGAGGACTCTTGGAAACTCGGGCCCAGTTTCCTCTGGACTT-TGCCTCACGCATCTTT--CCCCTTTGCCGACTTTGCTCTGTGTACGT-TTGTTGTAATAAATGTCAGCCATTGAGTATAATTACATACTGAATCTTG----TGAGTCCTCCCAGAAAGTCACATAGCC-CAGAATCAGGTTTTGTAAATCGGACCTAAAGACTCTCAAAAGCCCTAGGGTGACCCT---------CCATGGTGTAGGGTACCCTCGCATCCCATGCAAATACCTAATATGTctagcactgttctaggtgctggtgATGCCAGATGGGAAAGAAAGAGGTTGTGACCTGTGGGCCTTTTATCCTAAT-------TTGGAGGGTGTGGACAC----ACAGGCCAAATAAAGTAACTTCAGAGCAAGGTAAGaacta--tcaagaaaataaaaaataaaacagtataatGGGCTGGAGAGAGCCATCTGAGTAGCA--------GAGGGGAGGACTGTGAGGGAGACTA-AGGC-TGAAGAGGCTTCTTGAAGAAGGTGACTTCAGAATTCAGAGGCAAATGAAGA---------------AGAGCACACCGggcagaggggagggcaggggcaaaggcccagagg---cagg-gCCTGCAGGCG----TGTTCTAGAGATAaagagaggggaggggcagggcggAGTAGCAGGAGCCCAGTGCACA--------------------------------------GCGGGAGGTGGATTCAAA-----------------GGGGACCTGGAGA-----------------------------------------------------AGT-GGGTGTGGGCATGGGGGTG-----------------------------GCCATGGCTGCAGGGC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72116006 1076 - 125710982 gagatttcgatatccttagaaagacctgcttgcaaggttgaccct--actgaatggcgtctaggaacccaaacagtaaacagttctctaggctgatgtaaaac-tttcttccggtgatataagcagctctggtactgagcctgtacaaacaaagtggcttatgctgaacacctgctttcttctgggagtacagaatctgggtacatgctaggcaga-ggtacccacatgaccag-cccccagtaagacacttgggcactgagtgtctaacaggcctccgtggaggccagcacttctcgtgtgttgttgggactccattctggaggaattcagtgcatctggtgaaactccaccaggagaggactcttggaaactcgggcccagtttcctctggactt-tgcctcacgcgccttt--cccctttgccgactttgctctgtgtacgt-ttgttgtaatacatgtcagccattgagtataattacatactgaatcttg----tgagtcctcccagaaagtcacatagcc-cagaatcaggttttgtaaatcGGACCTCAAGACTCTCAAAAGCCCTAGGGTGACCCT---------CCATGGTGTAGGGTACGCTAGCATCCCACGCAaatacctaatatgtctagcactgttctaggtgctggtgatgccagacaggacagaaagaggctgtgacctgtgggccttttatcctaat-------ttggagggtgtggacacacagacaggccaaataaagcaacttcagagcaaggtaagaacta--tcaagaaaataaaaaataaaacagtataatgggctggagagagccatctgagtagca--------gagcggaggactgcgagggaggcta-aggc-tgaagaggcttcttgaagaaggtgacttcagaattcagaggcaaatgaaga---------------agagcacaccgggcagaggggagggcagggacaaaggcccagagg---cagg-gcctgcgggcg----tgttctagagataaagagaggggaggggcagggtggagtagcaggagcccagtgcaca--------------------------------------gcgggaggtggattcaaa-----------------ggggacctggaga-----------------------------------------------------agt-gggcgtgggcatgggggtg-----------------------------gccacggttgcagggc i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75575329 1042 - 121768101 gagatttctatatccttagataggcctgcttgcaaggctgacccc--actaaatggtgtctataaacccaaacagtaaacaggcctctaggttgatgtaaaac-ttgcctccagtgatatgagcatatctggtactgagcctgtacaaacagggtgtcttatgctgaacacctgctttcttctgggagtccagaatctgggtacatgtgaggcagc-agtacctacgtgaccag-cccccaggaggacacttgggtaccgagtctctaacgggcttcggtggaggccagcgcttcatttgtgctgt---gattccatgctgggggaattgagtgcatcccacggaactcca----gagaggactcttggaaactcaggcccagtttcctctggactt-tgcctcacgcgcctttc-cccctttgctgactttgctctgtgtactt-ttgttgtaataaatgtcagtcactgagtataattacattctgaatcttg----tgagtcctcccagaaagtcacTTCGCC-CAGAATCAAGTTATGCAAATTGAACCTCAGGACTCTCAAAAGCCCTAGGGTGACCCCCCTTCCCTGCCATGGTGTAGGGTCACCCCACATCCTGTGCAagcatctaataggtctagcactgttctaggtgcaggtgatgcc------------aagagcctgtgccctatgggccttttctcctaac-------tgggaggatgtggacac----acaggccaaatgaagtaacttcagagcaaggtaagaa------cgagaaaataaa----aaaacgaaataatgggctggagagtgccatctgagcagca--------gagtggagggctgtgagggaggcta-aggc-cgaggaggcttct---agaaggtgactgcagagtt-ggaggcacatgaagaagagcagt------gagggcacaccaggcagagggcagggcaagtgcaaaggcctggagg---caag-gcccgcaggcg----tgttctaggaacaaaga-----gaagagcagggtcgagtggctggagcccaaggcaca--------------------------------------ggaggaggtaggttcaaa-----------------gggg-cctggaga-----------------------------------------------------agt-gggctcgggca--------------------------------------cca---cctcagggc i calJac3.chr12 C 0 C 0 s mm10.chr14 24178258 1098 + 124902244 GAGACTTGAGT----TTGAAAAGGTCTATGTTCACAGCTGCCTCCTGACTAACTGGCATCCAGGAACCTG------------------ATGGTGATGGGGAGC-TGTCGTCAAGG--------------TGGGACC-AGCCCATAT--------------------------------------gaagtctgcagctttggtctctactaagcaga-aatggac-tgcgaccag-cacccaggaaa--agctacacactgtctgtccactgtgcttcccaagaagtgggggtgccgtatgagctgtcacagctccacactgaag--atcaaatgtatctgatgtgactctccttgca---aactccatgggacctggacctgatttcccctggactcaccccttgtccttttttcttccctgtgttgatttcaccttgtgtccctacagctaca----attttagccagtggaaacgattatatattgagtcttgcttttgagtcct---aacaagtcacagaacctcaga---------------------------------gatggcattagg--gacttt---------cTAAAATGAGGG------------------------CATAAAATGTCCAGTATTGTTCTAGGCATTGTCAGTAAGGAGCAGGAGAGGAAGCGATTGTGCCTTAAGGTCTGTTAATCTCAGTGCCAGCACTGGGGGAAATGGACCCACCTATGGAACAAGAACAATATCCTCC---TATATTAACATCGACCTCAAGAAAATGGA-AACGGGAGAGTACCATGTACAGGGGACG--CTTCTAAGCATCACAGAGCCGAAGAGGAAGGCTGTGAGGGAGGCTACCACC-TGGGGATGACTTTCTAAGAAAATGATTTCAAAGT---GAAGCTAACGAAGAAAAGAAATTGGCCAAAAAGCACA---GATATAGCCAAAGGCTGGGGCACAAGTGCAAAGGCTACAGG-GCAGACACACAATGTTGTACAAGTAACAGCGA-----GAAGAG-GATGCAGACTAGGTAAAACCCAGTATACATAGAGGCTTACAGAAGCATGCCCAAGTCCCAGGCTCAGAGGGAAGGCGGAATTACAACAGTACGGCAGACTGCAGGCATCTGGAGAGCAgcatagcggagcatgcttgtcagcccaggactcaggcaggctgaggctacagcaggatctaggtttgaggctgactgagctacacacattacaaatatgccagccatggctgtgtagc i mm10.chr14 C 0 I 9 s canFam3.chr4 27733190 795 + 88276631 gggacttctat--cctaaggaaggcctgctggcaag-ttgaccct----tggctggcatccgggaacctga----------------------------------------------------------------tgggctc----------------------------cttgctttcttccgggagtccagaatcccagtacatgcagggcagagggtgcctgggaggcagg-accccagtaaattccttgggcAGGCAGT-------------------AGGTCA-CAATTCgtgtg---------------------------------------------actcca-caggggaagcctcctgaaaatcagcacctgatttcctctggactt-tgccccatgtgcctct--tcctttggttgattttgcttcgtgtgttt-tcactgaaataaattttagct-ctgagtatgattacatgttgagttttg----tgagtcatcctagcaaatcaccaaacc-tggg---------------------------------ggaggtgctaaa--gacccc---------tca------------------------acacaGGTATCTAATAtat----------tctaggcactgatgatgctggacaggacacataaagactgcggcttatggatcttt-atcctc-c-------tgggagggtataaacacacagacagg-taggtagag-------agagagagagagagagag--tta--aaaataataaataaaataagttcaaagtataataagggcta---------ct--------gagaaaagat-----agaggggcta-atgcttaaggaggcttctctgagaaagtgactcctgagtctagatgcaaatgaagagcagcagt------tagagcacac-------aggggcaaacaagtgcaaaggccctgagg---caggaacccccacaca----cattctaggcacaaaga-----gaagggcagggct--ccagtcagagcccaatgaaca-----------------------------------------agaagtggattcaaa-----------------atgaggctgcaga-----------------------------------------------------cat-g-----------------------------------------------ggcacagcttcaaggc i canFam3.chr4 C 0 C 0 a score=1647703.000000 s hg38.chr10_KI270825v1_alt 83723 465 + 188315 tcacag----tgaagactgtctcctgagtgaga---------------------------------------------caggaagctgtggagggttttaa-gctagacagcattctactctaaatgacaggcactaaagttcatttggggtgctg-ttatagagaaaaaaacaaaccaagaaga--------------tgagttaagaggttGCCAGGGGG--GCTGCTGGCTTtggctaagcacctcatgggatctgagccctgggg-tgagtcactccacctctctgggtttcagcttccggattcctcaaatgcccaggctagaccaggaaagcttgtctggcccttccagctccaa------------cagccgaggaatcACCTGGCTCATTCAGTG-GCAGCCTGGTTTATCAA----GCGTTTGCAGCCTAGAGAACCAGAAGCTGGGACGATGGAACACTCCCTTTGGAATTAGGGTCAGCTCTCAATAAACACGAAAAACACAAAAAGCAAAAGAGGGCTTAATTTAAAAGTCAGAATCA s panTro4.chr10 76461667 445 + 133524379 tcacag----tgaagactgtctcctgagtgaga---------------------------------------------caggaagctgtggagggttttaa-gctagacagcattctactctaaatgacaggcactaaagttcatttggggtgctg-ttatagagaaaaaaacaaaccaagaaga--------------tgagttaagaggttGCCAGGGGG--GCTGCTGGCTTCGGCTAAGCACCTCATGGGAGCtgagccctgggg-tgagtcactccacctctctgggtttcagcttccggattcctcaaatgcccaggctagaccaggaaagcttgtctggcccttccagctccaa------------cagccgaggaatcCCCTGGCTCATTCAGTG-GCAGCCTGGGTTATCAA----GTGTTTGCAGCCTAGAGAACCAGAA--------------------CCTTTGGAGTTAGGGTCAGCTCTGAATAAACACGAAAAACACAAAAAGCAAAAGAGGGCTTAATTTAAAAGTCAGAATCA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76124674 463 - 133410057 tcacag----tgaagactgtctcctgagtgaga---------------------------------------------caggaagccgtggaggg-tttaa-gctagacagcattctactctaaatgacaggcactaaagttcatttggggtgctg-ttatagagaaaaaaacaaaccaagaaga--------------tgagttaagaggttGCCAGGGGg--gctgctgacttcggctaagcacctcatgggatctgagccctgagg-tgagtcactccacctctctgggtttcagcttccggattcctcaaatgccaaggctagaccaggaaagcttgtctggcccttccagctccaa------------cagccgaggaatc-cctggctcATTCAGTG-GGAGCCTGGGTTATCAA----GTTTTTGCAGCCTAGAGAACCAGAACCTGGGATGATGGAATATTCCCTTTGGAGTTAGGGTCAGCTCTCAACAAACACGAAAAACACAAAAAGCAAAAGAGCGCTTAATTTAAAAGTCAGAATCA i ponAbe2.chr10 I 345 C 0 s nomLeu3.chr18 35066212 465 + 104879549 tcacag----tgaagactgtctcctgagtgaga---------------------------------------------caggaagctgtggagggttttaa-gctagacagcattctactctaaatgacaggcactaaagttcatttggggtgctg-ttatagagaaaaaaACAAACCAAGAAGA--------------TGAGTTAAGAGGTCGCCAGGGGG--GCTGCTGGCTTcggctaagcacctcatgggatctgagccctgggg-tgagtcactccacctctctgggtttcagcttccggattcctcaaatgccaaggctagaccaggaaagctcgtctggcccttccagctccaa------------cagccgaggaatcCCCTGGCTCATTCAGTG-GGAGCCTGGGTTATCAA----GTGTTTGCAGCCTAGAGAACCAGAACCTGGGACAATGGAATATTCCCTTTGGAGTTAGGGTCAGCTCTCAATAAACACGAAAAACACAAAAAGCAAAAGAGGGCTTAATTTAAAAGTCAGACTCA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73858909 465 - 130959383 tcacag----tgaagacggtctcctgagtgaga---------------------------------------------caggaagctgtggagggttttaa-gctagacagcattctactctgaatgacaggcactaaagttcatttggggtgctg-ttatagagaaaaaaccaaaccaagaaga--------------tgagttaagaggttGCCAGGGGG--GCTGCTGGCTTCGGCTGAGCACCTCATGGGATCtgagccctgggg-tgagtcactccacctctctgggtttcagcttccggattcctcaaatgccaaggctagaccaggtaagcttgtctggcccttccagctccaa------------cagccgaggaattccctggctcATTCAGTG-GGGGCCTGGGTTATCAA----ATGTTTGCAGCCTAGAGATCCAGAACCTGGGACGATGGAATATTCTCTTTGGAGCTAGGGTCAGCCCTCAATAAACATGAAAAACACAAAAAGCAAAAGAGGGCTTAATTTAAAAGTCAGAATCA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75420203 465 - 133195287 tcacag----tgaagacggtctcctgagtgaga---------------------------------------------caggaagctgtggagggttttaa-gctagacagcattctactctgaatgacaggcactaaagttcatttggggtgctg-ttatagagaaaaaaccaaaCCAAGAAGA--------------TGAGTTAAGAGGTTGCCAGGGGG--GCTGCTGGCTTcggctgagcacctcatgggatctgagccctgggg-tgagtcactccacctctctgggtttcagcttccggattcctcaaatgccaaggctagaccaggtaagcttgtctggcccttccagctccaa------------cagccgaggaattccctggctcATTCAGTG-GGGGCCTGGGTTATCAA----ATGTTTGCAGCCTAGAGATCCAGAACCTGGGACGATGGAATATTCTCTTTGGAGCTAGGGTCAGCCCTCAATAAACATGAAAAACACAAAAAGCAAAAGAGGGCTTAATTTAAAAGTCAGAATCA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73284724 465 - 125196307 TCACAG----TGAAGACGGTCTCCTGAGTGAGA---------------------------------------------CAGGAAGCTGTGGAGGGTTTTAA-GCTAGACAGCATTCTACTCTGAATGACAGGCACTAAAGTTCATTTGGGGTGCTG-TTATAGAGAAAAAACCAAACCAAGAAGA--------------TGAGTTAAGAGGTTGCCAGGGGG--GCTGCTGGCTTTGGCTAAGCACCTCATGGGATCTGAGCCCTGGGG-TGAGTCACTCCACCTCTCTGGGTTTCAGCTTCCGGATTCCTCAAATGCCAAGGCTAGACCAGGTAAGCTTGTCTGGCCCTTCCAGCTCCAA------------CAGCCGAGGAATTCCCTGGCTCATTCAGTG-GGGGCCTGGGTTATCAA----ATGTTTGCAGCCTAGAGATCCAGAACCTGGGACGATGGAATATTCTCTTTGGAGTTAGGGTCAGCcctcaataaacatgaaaaacacaaaaagcaaaagaggGCTTAATTTAAAAGTCAGAATCA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72117082 465 - 125710982 tcacag----tgaagatggtctcctgagtgaga---------------------------------------------caggaagctgtggagggttttaa-gctagacagcattctactctgaatgacaggcactaaagttcatttggggtgctg-ttatagagaaaaaaccaaaCCAAGAAGA--------------TGAGTTAAGAGGTTGCCAGGGGG--GCTGCTGGCTTcggctaagcacctcatgggatctgagccctgggg-tgagtcactccacctctctgggtttcagcttccggattcctcaaatgccaaggctagaccaggtaagcttgtctggcccttccagctccaa------------caGCTGAGGAATTCCCTGGCTCATTCAGTG-GGATCCTGGGTTATCAA----GTGTTTGCAGCCTAGAGAACCAGAACCTGGGACGATGGAATATTCTCTTTGGAGTTAGGGTCAGCCCTCAAAAAACATGAAAAACACAAAAAGCAAAAGAGGGCTTAATTTAAAAGTCAGAATCA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75576371 475 - 121768101 tcacag----tgaagactgt-tcctgagtgaga---------------------------------------------tgggaggctatggagggttttaa-gctagagagcagtctactctgaataacaggcactaaagttcatttggggtgctg-ttatagagaaACAAACAAACCAAGATGA--------------TGAGTTAAGAGGTTGCTAGGGGGCTGCTCCAGGCTT-GGCTAA-CACCTTATGGGATCTGAGTcctggggctgagtcattccgtatctctgggtttcagcttctggattcctcaaatgccaagactgaaccaagaaaccttgcctggtccttccagcccCAGTCCAGGGGGTTCCAGTCCAGGAACACCCTGGCTCATTCAGTA-GGGGCCTGAGTTATCAG----GTGTTTGCAGCCCAGAGAACCAGAAGCTGGGATGATGGAATATTCCCTTTGGAGTTAAGGTCAGCCCTCAATAAACATGAAAAACACAAAAAGCAAAAGAGGGCTTAATTT--AAGTCAGAATCG i calJac3.chr12 C 0 C 0 s mm10.chr14 24179365 483 + 124902244 tctca-------aaaacaataaCCaaaaaaaaaaaaaaaaaaaaaaCCAAAACACCAAACCAACCAAACAACCCCAACCAGAAAAACAGAGAGAATATGAGCACAAGAATCCATTCTACTGTGAATTACAGGAGCTCAGCTTCCCCGGGGGTGCTGTTTACGAAGGGAAAAACAAAACAAGACAAAACACTAGCAAACCTGAGAAGACAGGGTTTTTCAGGG--GTTGC------CTGTTGAGCACCAC------TCAAAgatcttgg--taactca--ccacctctgtgggttt--gcttccttatttctcaaataacaggacaaaaccggaaaggctggcttagcccctgcagctccta------------cagcccaggaACAACCTTGCTCACCGTGTG-GG-CCCTGAGTTATCAACACCATCTTTGCAGCCCAGACAGTCACAACCTTGAACAGTGGGACATTTCCTCCAGAG--------------------ACAGACAGGACACAGAAGGAAGGAG------TGATTCAAAAGTCAGAATTA i mm10.chr14 I 9 I 2247 s canFam3.chr4 27733985 446 + 88276631 tcgcagcaaacaaaggctgtatcctgagtaaga---------------------------------------------cgggaaccatgggaggattttaa-gtaaaacagtatcctactgcaaattacagatactcaagttcattcaaggtgctg-gtttaaagaataa---aAACCCAGA-----------------TGAGTTAATCGATTGCCAGGGG---CCTGCTGACTTCTGCTAAGCACCTCAGGGGATCtgagcccttggg-tggg-cactccacatctctgagtttcagtttccttattcctcaaatgataggactcaaccagaAAAGCCTGCTTGACTGTTCCAAATGCAA------------CAGGCCGGGAATTATCT-GCATATTCAGCACAGACCCTGAGTTATCAG----ATTTCTGCATTCTCAAGAACAAGAATCTGGGACTACCGAATACTCCCTCGGAAGCGAGGGTTCGCCCTCAGTAAATACGATGAAC-----AAGTCAGAG----------CTAAAAGTCAAAATCA i canFam3.chr4 C 0 C 0 a score=235795.000000 s hg38.chr10_KI270825v1_alt 84188 75 + 188315 TAGCAACAA-GAAAGTAAGGT-CTTCCTCTAAGACC--TAAG--CATTAGATTCTAGGACTGTAGACTCTTAAAGAGGAAG s panTro4.chr10 76462112 75 + 133524379 TAGCAACAA-GAAAGTAAGGT-CTTCCTCTAAGACC--TAAG--CATTAGATTCTAGGACTGTAGACTCTTAAAGAGGAAG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76125137 75 - 133410057 TAGCAACAA-GAAAGTAAGGT-CTTCCTCTAAGACC--TAAG--CATTAGATTCTAGGACTGTAGACTCTTAAAGAGGAAG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35066677 74 + 104879549 TAGCAACAA-GAAAGTAAGCTCCTCCCTCTAAGACC--TAAG--CATTAGATTCTAGGACTGTAGACTCTT--AGaggaag i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73859374 76 - 130959383 TAGCAACAA-GAAAGTAAGCTCCTTCCTCTAAGGCC--TAAG--CATTAGATCCTAGGACTGTAGACTATTAAAGAGGAAG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75420668 76 - 133195287 TAGCAACAA-GAAAGTAAGCTCCTTCCTCTAAGGCC--TAAG--CATTAGATCCTAGGACTGTAGACTCTTAAAGaggaag i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73285189 76 - 125196307 TAGCAACAA-GAAAGTAAGCTCCTTCCTCTAAGGCC--TAAG--CATTAGATCCTAGGACTGTAGACTCTTAaagaggaag i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72117547 76 - 125710982 TAGCAACAA-GAAAGTAAGCTCCTTCCTCTAAGGCC--TAGA--CATTAGATCCTAGGACTGTTGACTCTTAAAGaggaag i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75576846 76 - 121768101 TAGCAACAA-GAAAGTAAGCTCCCTCCTCTAAGACC--TAAG--CATTAGATCCTAGGACTGTTGACTCTTAAAGAGGAAG i calJac3.chr12 C 0 C 0 s canFam3.chr4 27734431 81 + 88276631 CGGAGACAAGGAGAAGGAGCCTATTCCTCTAGGACATGTAAGCACATGTAAGTCCAGGATGGCGGACTGCTGGGGAGGCAG i canFam3.chr4 C 0 I 114 e mm10.chr14 24179848 2247 + 124902244 I a score=321179.000000 s hg38.chr10_KI270825v1_alt 84263 138 + 188315 TCAAGGAAgagggagaaatggagggaa----------------ggaggga---agaagggaag-gaaggaaggaaggggaggagaaagagaaagagagagaaa--gaaag--------------------------------------------------------------------------ggaaaggagggagggagagagggagggaggATTGGTTCATTTCAGGCTCA s panTro4.chr10 76462187 138 + 133524379 TCAAGGAAgagggagaaatggagggaa----------------ggaggga---agaagggaag-gaaggaagg----ggaggagaaagagaaagagagagaga--gaaag---------------------------------------------ag-------------------------agggaagggagggagggagagagggagggaggATTGGTTCATTTCAGGCTCA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76125212 138 - 133410057 TCAAGGAAgagggagaaatggagggaa----------------ggaggga---agaagggaag-gaaggaagg----ggaggagaaagggaaagacagagaga--gaaag---------------------------------------------ag-------------------------agggaagggagggagggagagagggagggaggATTGGTTCATTTCAGGCTCA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35066751 133 + 104879549 tcaaggaacagggagaaat------------------------ggaggga---agaagggaag-gaaggaagg----ggaggagaaagggaaagagagagaga--gaaag---------------------------------------------agg----------------------gaagagagggaagggagggagagagggagggaggaTTGGTTCATTTCAGGCTCG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73859450 177 - 130959383 TCAAGGAAgagggagaaacggaaggat----ggagggagggagggaagga---agaggggaag-gaaggaagg----ggaggagaaagagagaaacagagggaaggaagg---------------------------------------------aggaagaaaggaaggaaggaagggaggcagggagggaggcagggagggagggagggaggATTGGTTCGTTTCAGGTTCA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75420744 177 - 133195287 tcaaggaagagggagaaacggaaggat----ggagggagggagggaagga---agaggggaag-gaaggaagg----ggaggagaaagagagaaacagagggaaggaagg---------------------------------------------aggaagaaaggaaggaaggaagggaggcagggagggaggcagggaggcagggagggaggATTGGTTCGTTTCAGGTTCA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73285265 209 - 125196307 tcaaggaagagggagaaacggaaggat----ggagggagggagggaagga---agaggggaag-gaaggaagg----ggaggagaaagagagaaacagagggaaggaagg-------------aggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaagggagggagggagggagggagggaggattggTTCGTTTCAggttca i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72117623 222 - 125710982 tcaaggaagagggagaaagggagggatggagggagggagggagggaggga---agaggggaag-gaaggaagg----ggaggagaaagagagaaacagagggaaggaaggaaggaaagaaggaaggaaggaaggaaggaaggaaggaagga----aggaaggaaggaaggaaggaagggagggagggagggagggagggagggagggagggaggaTTGGTTCGTTTCAGGTTCA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75576922 154 - 121768101 TCAAGGAAGAGGGAGAAATGGAGGGAG----------------GGAGAGAGCCAGAgaagaagagaaggaagg----agaagagaaagaaaaagaatgagagaaagaagg---------------------------------------------aa---------------ggaaagggaggagggagagaaggagggaaggagaaaaggaaAACTGGTTCATTTCAGGTTTA i calJac3.chr12 C 0 C 0 e canFam3.chr4 27734512 114 + 88276631 I e mm10.chr14 24179848 2247 + 124902244 I a score=265015.000000 s hg38.chr10_KI270825v1_alt 84401 89 + 188315 TTCTTTTTCCTTTATTTATTTTTAAAGCAGAACATTTTCTTTCAAGGGAAATCTT-----ACTAGTACACCAAAAATACAGAACTTATTTTAAA s panTro4.chr10 76462325 89 + 133524379 TTCTTTTTCCTTTATTTATTTTTAAAGCAGAACATTTTCTTTCAAGGGAAATCTT-----ACTAGTACACCAAAAATACAGAACTTATTTTAAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76125350 89 - 133410057 TTCTTTTTCCTTTATTTATTTTTAAAGCAGAACATTTTCTTTCAAGGGAAATCTT-----ACTAATACACCAAAAATACAGAACTTATTTTAAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35066884 89 + 104879549 TTCTTTTTCCTTTATTTATTTTTAAAGCAGAACATTTTCTTTCAAGGGAAATTTT-----ACTAGTATACCAAAAATATATAACTTATTTTAAA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73859627 88 - 130959383 TTCTTTTTCCTTCATTTATTTTTAAAGTGGAACATTTTCTCTCAAGGGAAATCTT-----ACTAGGACACC-AAAATATAGAATTTATTTGAAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75420921 88 - 133195287 TTCTTTTTCCTTCATTTATTTTTAAAGTGGAACATTTTCTCTCAAGGGAAATCTT-----ACTAGGACACC-AAAATATAGAATTTATTTGAAA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73285474 80 - 125196307 ttctttttccttcatttatttttaaagtggaacATTTTCTTTCAAGGGAAATCTT-------------ACC-AAAATatagaatttatttgaaa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72117845 84 - 125710982 TTCTTTTTCC----TTTATTTTTAAAGCGGAATATTTTCTTTCAAGGGAAATCTT-----ACTAGGACACC-AAAATATAGAATTTATTTTAAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75577076 84 - 121768101 TTCTTTTTCC----TTTATTTTTAAAGCAGAACATTTTCTTTCAAGGGAGCTCTT-----ACTAGGACATC-AAAATATAGAACTTATTTTAAA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27734626 92 + 88276631 tcttttcttttttttttttttttAAAGCAAAACTCTTTCCTTCAAAGGAAATCTTACAAGACAAGGGTACT-GAAATCCA-AACTTATTTTAAA i canFam3.chr4 I 114 I 189 e mm10.chr14 24179848 2247 + 124902244 I a score=136964.000000 s hg38.chr10_KI270825v1_alt 84490 40 + 188315 AAGCAGTACACAGGTATCTCAGGCAGTCAAAATCTTCACT s panTro4.chr10 76462414 40 + 133524379 AAGCAGTACACAGGTATCTCAGGCAGTCAAAATCTTCACT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76125439 38 - 133410057 AAGCAGTACACAGGTATCTCAGGCAGTCAAAATCTTCA-- i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35066973 40 + 104879549 AAGCAGTACACAGGTATTTCAGGCAGTCAAAATTTTCACT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73859715 40 - 130959383 AAGTAGTACACAGGTGTTTCAGGTGGTCAAAATCTTCACT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75421009 40 - 133195287 AAGTAGTACACAGGTGTTTCAGGTGGTCAAAATCTTCACT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73285554 40 - 125196307 aagtagTACACAGGTGTTTCAGGTGGTCAAAATCTTCACT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72117929 40 - 125710982 AAGCAGTACACAGGTGTTTCAGGTGGTCAAAATCTTCACT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75577160 40 - 121768101 AAGCAGTACACAGGTGTCTCAAGCAGTCAAAATCTTCACT i calJac3.chr12 C 0 C 0 s canFam3.chr4 27734907 40 + 88276631 AAACAGTACATGGGTTCCTTGGGCAGTTAAAATCTTCATT i canFam3.chr4 I 189 I 190 e mm10.chr14 24179848 2247 + 124902244 I a score=275184.000000 s hg38.chr10_KI270825v1_alt 84530 91 + 188315 GTTTTGTAAAATGGCATCACTGTTGCAAAACAGGAATGCACACTGAGAAA-----CAGAACCTCACTGACAGTGCCCACTCTA-CATCTAAAATCTT s panTro4.chr10 76462454 91 + 133524379 GTTTTGTAAAATGGCATCACTGCTGCAAAACAGGAATGCACACTGAGAAA-----CAGAACCTCACTGACAGTGCCCACTCTA-CATCTAAAATCTT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76125477 91 - 133410057 GTTTTGTAAAATGGCGTCACTGTTGCAAAACAGGAATGCACACTGAGAAA-----CAGAACCTCACTGACAGTGCCCACTCTA-CATCTAAAATCTT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35067013 91 + 104879549 GTTTTGTAAAATGGCATCACTGTTGCAAAACAGGAATGCACACTGAGAAA-----CAGAACCTCACTGACAGTGCCCACTTTA-CATTTAAAATTTT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73859755 91 - 130959383 GTTTTGTAAAATGGCATCACTGTTGCAAAACAGGAATGCACACTGAGAAC-----CAGAGCCTTACTGACAGTGCCTACTCTA-CATCTAAAATCTT i rheMac3.chr9 C 0 I 370 s macFas5.chr9 75421049 91 - 133195287 GTTTTGTAAAATGGCATCACTGTTGCAAAACAGGAATGCACACTGAGAAC-----CAGAGCCTCACTGACAGTGCCTACTCTA-CATCTAAAATCTT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73285594 91 - 125196307 GTTTTGTAAAATGGCATCACTGTTGCAAAACAGGAATGCACACTGAGAAC-----CAGAACCTCACTGACAGTGCCTGCTCTA-Catctaaaatctt i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72117969 87 - 125710982 GTTTTGTAAAATGGCATCACTGTTGCAAAACAGGAATGCACACTGAGAAC-----CAGAACCTCACTGACAGTGCCCGCTCTA-CATCTAAAA---- i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75577200 75 - 121768101 GTTTTGTAAAATAGCATCTCCGCTGCAAAACAGGAATGCACA--GAGAAA-----CAGAACCTCACTG--------------A-CACCTAAAATCTT i calJac3.chr12 C 0 C 0 s canFam3.chr4 27735137 96 + 88276631 GTTTGGTAAAAATACTTCACTGTGGCAGATCAGAGCTGCAAACAAAGAAATCCATCAGAAAACAACC-ACTAAGCCCATTCTATCGTCTTATGTCTT i canFam3.chr4 I 190 C 0 e mm10.chr14 24179848 2247 + 124902244 I a score=98808.000000 s hg38.chr10_KI270825v1_alt 84621 62 + 188315 TCTTTaaaaaaaaaaaaaaaaaaaaaaa-------GCCCTggccaggcacagtggcacatgc-ctgtaat s panTro4.chr10 76462545 64 + 133524379 TCTTTaaaaaaaaaaaaaaaaaaaaaaaa-----aGCCCTggccaggcacagtggcacatgc-ctgtaat i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76125568 53 - 133410057 TCTTTAAAAAAAAAAAAAA----------------GCCCTggccaggcacagtggcgcacgc-ctgtaat i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35067104 68 + 104879549 TCTTTaaaaaaaaaaaaaaaaaaaaaaaaaaac-aaaCCTggccaggcacagtggctcatgc-ctgtaat i nomLeu3.chr18 C 0 C 0 s macFas5.chr9 75421140 60 - 133195287 -aaaaaaaaaaaaaaaaaaaaaaaaaaaG--------CCTggccaggcacagtggctcatgc-ctgtaat i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73285685 48 - 125196307 -------------aaaaaaaaaaaaaaag--------cctggccaggcacagtggctcatgc-ctgtaat i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72118056 61 - 125710982 TCTTTaaaaaaaaaaaaaaaaaaaaaaaG--------CCTggccaggcacagtggctcatgc-ctgtagt i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75577275 49 - 121768101 TCTTTAAAAAAAATACG--------------------CCTggctaggcacagtggctcacgc-ttataat i calJac3.chr12 C 0 C 0 s canFam3.chr4 27735233 68 + 88276631 TTTCTGAAAACAAAAACaaaatagaatatcttctaaaccta--cagaaaaagcagcacacgcaatgtaat i canFam3.chr4 C 0 I 2208 e mm10.chr14 24179848 2247 + 124902244 I e rheMac3.chr9 73859846 370 - 130959383 I a score=573372.000000 s hg38.chr10_KI270825v1_alt 84683 279 + 188315 cccagcactttgggaagccgaggtaggcggatcacctgaggtcaggagtttgagaccagcctgaccaacatggtgaaaccttgtctctactaaacatacaaaaattagctgggcgtggtggcgggcacctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaacccaggatgcggaggtggcagtgagccgagatcacgccat-ggcactccagcctgggtgacaagcgcgagacttcgtct------------caaaaaaaaga-cgaagaaT-----GGGCTCA s panTro4.chr10 76462609 279 + 133524379 cccagcactttgggaagccgaggtaggtggatcacctgaggtcaggagtttgagaccagcctgaccaacatggtgaaaccttgtctctactaaacatacaaaaattagctgggcgtggtggcgggcacctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaacccaggatgcggaggttgcagtgagccgagatcacgccat-ggcactccagcctgggtgacaagcgcgagacttcgtct------------caaaaaaaaga-agaagaaT-----GGGCTCA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76125621 278 - 133410057 cccagcactttgggaagccgagataggcggctcacctgaggtcaggagtttgagatcagcctgaccaacatggtgaaactttgtctctactaaacatacaaaaattagctgggcgtggtggcaggcacctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcagtgagctaagatcacgccat-ggcactccagccttggtgacaaatgtgagacttcgtct------------caaaaaaaa-a-aaaagaaT-----GGGCTCA i ponAbe2.chr10 C 0 I 1 s nomLeu3.chr18 35067172 274 + 104879549 cccagcactttgggaagccgaggtaggcagatcacctggggtcaggagtttgagaccagcctgaccaacatggtgaaaccttgtctctactaaatgtacaaaaattagctgggtgtggtggcaggcacctgtaatcccagctacttgggaggctgaggcaggagaatcacttgaacccaggtggcggaggttgcagtgagccgagatcgcgccat-ggcactccaacctgggtgacaagcgcgagactttgcct------------caaaaaaaa------agaaT-----GGGCTCA i nomLeu3.chr18 C 0 I 1 s macFas5.chr9 75421200 296 - 133195287 cccagaactttgagaggccaaggtgggcggatcacctgagatcaggagattcagaccagcctgaccaacatggtgaaaccttgtctctactaaacatacaaaaattagctgcacatggtggcaggcacctgcaatcctagctactcgggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagtcgagatcgcaccac-tgcactccagcctgggtgacaagcgtgagacttcatctcaaaaaaaaaaaaaaaaaaaaaa-aaaaaaaGGAATGGGGCTTA i macFas5.chr9 C 0 I 1 s papAnu2.chr9 73285733 283 - 125196307 cccagaactttgagaggccgaggtgggcggatcacctgagatcaggagattcagaccagcctgaccaacatggtgaaaccttgtctctactaaacatacaaaaattagctgcacatggtggcaggcacctgcaatcctagctactcgggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagtcgagatcgcaccac-tgcactccagcctgggtgacaagcgcgagacttcatct------------aaaaaaaaaaa-aaaaaaaggaat-gggctTA i papAnu2.chr9 C 0 I 1 s chlSab2.chr9 72118117 278 - 125710982 cccagaactttgagaggccgaggtgggcagatcacctgagatcaggaggtccagaccaacctgaccaacatggtgaaaccttgtctctactaaacacacaaaaattagctgcacgtggtggcaggcacctgcaatcctagctactcgggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagtcgagatcgcaccac-tgcactccagcctgggag--aagcacgagacttcatct------------caaaaaaaaaa-aaaaaaTTA----GGGCTCA i chlSab2.chr9 C 0 I 25 s calJac3.chr12 75577324 262 - 121768101 tccagcactgtgggaggccaaggcaggcaaatcacctgaggtcaggagtttgagaccagcctaa-------------------tctctactaaatatacaaaaattagctggacgtggtggtgggtgcctgtaatcccagctacttgggaggctgaggcaggaaaattgctttgatccaggaggtagaagttgctgtgagccaagatcatgccataagcactccagcctgggtgacaagcgtgagacgctgtct------------cacaaaaaaaataaaaGAGT-----GGACTCA i calJac3.chr12 C 0 I 1 e canFam3.chr4 27735301 2208 + 88276631 I e mm10.chr14 24179848 2247 + 124902244 I e rheMac3.chr9 73859846 370 - 130959383 I a score=16313.000000 s hg38.chr10_KI270825v1_alt 84962 13 + 188315 CCATGACTAT-ACT s panTro4.chr10 76462888 13 + 133524379 CCATGACTAT-ACG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76125900 13 - 133410057 CCATGACTAT-ACC i ponAbe2.chr10 I 1 C 0 s nomLeu3.chr18 35067447 13 + 104879549 CCATGACCAT-ACC i nomLeu3.chr18 I 1 C 0 s macFas5.chr9 75421497 14 - 133195287 CCATGACCATAATC i macFas5.chr9 I 1 C 0 s papAnu2.chr9 73286017 14 - 125196307 CCATGACCATAATC i papAnu2.chr9 I 1 C 0 s calJac3.chr12 75577587 13 - 121768101 CCATGACCAC-ACC i calJac3.chr12 I 1 C 0 e canFam3.chr4 27735301 2208 + 88276631 I e mm10.chr14 24179848 2247 + 124902244 I e chlSab2.chr9 72118395 25 - 125710982 I e rheMac3.chr9 73859846 370 - 130959383 I a score=13494.000000 s hg38.chr10_KI270825v1_alt 84975 15 + 188315 GGGTCAGTGAAGGAC s panTro4.chr10 76462901 15 + 133524379 GGGTCAGCGAAGGAC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76125913 15 - 133410057 CGGTCAATGAAGGAC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35067460 15 + 104879549 TGGTCAATGAAGGAC i nomLeu3.chr18 C 0 C 0 s macFas5.chr9 75421511 12 - 133195287 TGGTCAATAAAC--- i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73286031 12 - 125196307 TGGTCAATAAAC--- i papAnu2.chr9 C 0 C 0 s calJac3.chr12 75577600 15 - 121768101 CGGTCAATGAAGGGC i calJac3.chr12 C 0 C 0 s canFam3.chr4 27737509 15 + 88276631 GAGCAAATGGAGAGT i canFam3.chr4 I 2208 C 0 e mm10.chr14 24179848 2247 + 124902244 I e chlSab2.chr9 72118395 25 - 125710982 I e rheMac3.chr9 73859846 370 - 130959383 I a score=-2280.000000 s hg38.chr10_KI270825v1_alt 84990 2 + 188315 --AG s panTro4.chr10 76462916 2 + 133524379 --AG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76125928 2 - 133410057 --AC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35067475 2 + 104879549 --AC i nomLeu3.chr18 C 0 C 0 s chlSab2.chr9 72118420 2 - 125710982 --AC i chlSab2.chr9 I 25 C 0 s calJac3.chr12 75577615 2 - 121768101 --AG i calJac3.chr12 C 0 C 0 s canFam3.chr4 27737524 2 + 88276631 TT-- i canFam3.chr4 C 0 C 0 e mm10.chr14 24179848 2247 + 124902244 I e papAnu2.chr9 73286043 0 - 125196307 C e macFas5.chr9 75421523 0 - 133195287 C e rheMac3.chr9 73859846 370 - 130959383 I a score=398366.000000 s hg38.chr10_KI270825v1_alt 84992 113 + 188315 TCCTGACATCT-GGTCAACCAACGCCT-TCTACCCACATCTGG-AAAGGTCCAGCATCTAAACTGGATTGCCCTGATTGGTGAGCAATACCTCAAAAATGCCAATTAAAAATTACT s panTro4.chr10 76462918 113 + 133524379 TCCTGACATCT-GGTCAACCAACGCCT-TCTACCCACATCTGG-AAAGGTCCAGCATCTAAACTGGATTGCCCTGATTGGTGAGCAATACCTCAAAAATGCCAATTAAAAATTACT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76125930 113 - 133410057 TCCTGACATCT-GGTCAACCAACACCT-TCTACCCACGTCTGG-AAAGTTCCAGCATCTAAACTGGATTGCCCTGATTGGTGAGCAATACCTCAAAAATGCCAATTAAAAATTACT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35067477 113 + 104879549 TCCTGACATCT-AGTCAACCAACGCCT-TCTACCCATGTCTGG-AAAGGTCCAGCATCTAAACTGGATTGCCCTGATTGGTGAACAATACCTCAAAAATGCCAATTAAAAATTACT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73860216 113 - 130959383 TCCTGAAATCT-GGTCAACCAATGCCT-TCCACCCACGTCTGG-AAAGGTCCAGCATCTAAACTGGATTGCCCTGATTGGTGAGCAATACCTCAAAAATGCCAATTAAAAATTACT i rheMac3.chr9 I 370 C 0 s macFas5.chr9 75421523 113 - 133195287 TCCTGAAATCT-GGTCAACCAATGCCT-TCCACCCACGTCTGG-AAAGGTCCAGCATCTAAACTGGATTGCCCTGATTGGTGAGCAATACCTCAAAAATGCCAATTAAAAATTACT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73286043 113 - 125196307 TCCTGAAATCT-GGTCAACCAATGCCT-TCCACCCACGTCTGT-AAAGGTCCAGCATCTAAACTGGATTGCCCTGATTGGTGAGCAATACCTCaaaaatgccaattaaaaattact i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72118422 113 - 125710982 TCCTGAAATCT-GGTCAACCAATGCCT-TCCACCCACGTCTGG-AAAGGTCCAGCATCTAAACTGGATTGCCCTGATTGGTGAGCAATACCTCAAAAATGCCAATTAAAAATTACT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75577617 112 - 121768101 TCCTGATAGCT--GTCAATCAACACCT-TCTACCCATGTCTTG-AAAGGTCCAGCATCTAGACTAGATTGCCCTGATTGGTAAGCAATACCTCAAAAACGCCAATTAAAAATTACT i calJac3.chr12 C 0 C 0 s canFam3.chr4 27737526 115 + 88276631 TCTTGTCTTCTGGGTCAATCAGTATATCTCCACCTGTGTCTGGAAAAGGTCCAGCTTCTAGACTGGGCTGCCCTAACTTGTGGAC-ATACCTCAAACATTCCAATTAAAAATTGCT i canFam3.chr4 C 0 C 0 e mm10.chr14 24179848 2247 + 124902244 I a score=128211.000000 s hg38.chr10_KI270825v1_alt 85105 50 + 188315 TCAggccgggcgc---agtggctcacgcctgta--------------------------atcccagcactttgggaggc s panTro4.chr10 76463031 50 + 133524379 TCAggccgggcgc---agtggctcacgcctgta--------------------------atcccagcactttgggaggc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76126043 50 - 133410057 TCAggccgggcgc---agtggctcacgcctgta--------------------------atcccagcactttgggaggc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35067590 50 + 104879549 TCAggccaggcgc---agtggctcacccctgta--------------------------atcccagcactttgggaggc i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73860329 50 - 130959383 TCAggccgggcac---agtggctcacgcctgta--------------------------atcctagcactttgggaggc i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75421636 50 - 133195287 TCAggccgggcac---agtggctcacgcctgta--------------------------atcctagcactttgggaggc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73286156 50 - 125196307 tcaggccgggcac---ggtggctcacgcctgta--------------------------atcctagcactttgggaggc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72118535 50 - 125710982 TCAggccgggcgc---ggtggctcacgcctgta--------------------------atcctagcactttgggaggc i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27737641 77 + 88276631 TCAAg--gggcacctgggtggctcagtctggtaagtgtctgccttcagctcaggtcatgatctcagggtcctgggatcc i canFam3.chr4 C 0 I 56 e mm10.chr14 24179848 2247 + 124902244 I e calJac3.chr12 75577729 0 - 121768101 C a score=71649.000000 s hg38.chr10_KI270825v1_alt 85155 30 + 188315 cgaggtgagcagatcacaagattggaagtt s panTro4.chr10 76463081 30 + 133524379 cgaggtgagcagatcacaagattggaagtt i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76126093 30 - 133410057 caaggtgagcagatcacaaggttggaagtt i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35067640 30 + 104879549 caaggcaggcagatcacaaggttggaagtt i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73860379 30 - 130959383 cgaggtgggcagatcacaaggttgggagtt i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75421686 30 - 133195287 cgaggtgggcagatcacaaggttgggagtt i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73286206 30 - 125196307 cgaggtgggcagatcacaaggttgggagtt i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72118585 30 - 125710982 cgaggtgggcagatcacaaggttgggagtt i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27737718 56 + 88276631 I e mm10.chr14 24179848 2247 + 124902244 I e calJac3.chr12 75577729 0 - 121768101 C a score=480050.000000 s hg38.chr10_KI270825v1_alt 85185 219 + 188315 ccagaccagcctggctaacatggtgaaaccctgtctct---------------------------actaaaaatacaaaaattag--------------ccgggtgtggtgg----caggcacctggaatccctgctactccggaggctgaggcaggagaattacttgaacccaggaggcg---taggtt----gcagtgagccaagactgtgccactgcaccccagccttggcgacagagaaatattctgtctc-------------------------------aa------------aaaaaaaaa--TTACC s panTro4.chr10 76463111 221 + 133524379 ccagaccagcctggctaacatggtgaaaccctgtctct---------------------------actaaaaatacaaaaattag--------------ccgggtgtggtgg----caggcacctggaatccctgctacttaggaggctgaggcaggagaattacttgaacccaggaggcg---taggtt----gcagtgagccaagactgtgccactgcaccccagccttggcgacagagcaatattctgtctc-------------------------------aa------------aaaaaaaaaaaTTACC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76126123 221 - 133410057 cgaaaccagcctggctaacatggtgaaaccctgtctct---------------------------actaaaaatacaaaaattag--------------ccgggtgtggtgg----caggcacctggaatccctgctactcaggaggctgagggaggagaattacttgaacccaggaggcg---taggtt----gcagtgagccaagactgtgccactgcaccccagccttggcgacagagcaatactctgtctc-------------------------------aa------------aaaaaaaaaaaaTACC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35067670 204 + 104879549 cgagaccagcccggctaacatggtgaaaccctgcctct---------------------------actaaaaatacaaaaattag--------------ccgggcgtggtgg----caggcacctggaatccctgctactgaggaggctgaggcaggagaattacttgaac-----------------gt----gcagtgagccaagattgtgccactgcaccgcagcctgggtgacagagcaataccgtgtctc-------------------------------aa------------aaaaaaaa---TTACC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73860409 229 - 130959383 caagaccagcctggctaacatggtgaaaccctgtctct---------------------------acgaaaaatacaaaaattag--------------ccaggcgtggtgg----tgggcacctggaatccctgctactcaggaggctgagacaggagaattgcttgaacccaggaggcg---taggtt----gcagtgagccaagattgtgccactgtaccccagcctgggtgacagagcgatactctgtctc--------------a---------aaaaaaaaa------------aaaaaaaaaaaTTACC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75421716 230 - 133195287 caagaccagcctggctaacatggtgaaaccctgtctct---------------------------acgaaaaatacaaaaattag--------------ccaggcgtggtgg----tgggcacctggaatccctgctactcaggaggctgagacaggagaattgcttgaacccaggaggcg---taggtt----gcagtgagccaagattgtgccactgtaccccagcctgggtgacagagcgatactctgtctc-------------aa---------aaaaaaaaa------------aaaaaaaaaaaTTACC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73286236 233 - 125196307 cgagaccagcctggctaacatggtgaaaccctgtctct---------------------------acgaaaaatacaaaaattag--------------ccaggcgtggtgg----tgggcacctggaatccctgctactcaggaggctgaggcaggagaattgcttgaacccaggaggcg---taggtt----gcagtgagccaagattgtgccactgtaccccagcctgggtgacagagcaatactctgtctc----------aaaaa---------aaaaaaaaa------------aaaaaaaaaaattacc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72118615 226 - 125710982 cgagaccagcctggctaacatggtgaaaccctgtctct---------------------------acgaaaaatacaaaaattag--------------ccaggtgtgttgg----cgggtacctggaatccctgctactcaggaggctgaggcaggagaattgcttgaacccaggaggcg---taggtt----gcagtgagccaagattgtaccactgtaccccagcctgggtgacagagtgatactctgtctc--------------------------aaaaaaa------------aaaaaaaaaaaTTACC i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27737774 283 + 88276631 ccaccccacgctggct--catgtttacacactctctctccctctctcccttaaataactaactaaataaaatatttaaaaaaTAAATAAAAAATgacacctgggtggctcagtgcttgagcatctg-----ccttccgctcaggctg-tgatcctggag----tcctgggatcaagtcccgcatcaggctccccgcagggagcc-------tgcttctatgtctctgcct--------------ctctctgtctctcatgcataaataaatcaaatcttaaaaataaaTACataataattaaataaataaatCACT i canFam3.chr4 I 56 C 0 e mm10.chr14 24179848 2247 + 124902244 I e calJac3.chr12 75577729 0 - 121768101 C a score=277789.000000 s hg38.chr10_KI270825v1_alt 85404 78 + 188315 TCAAATGTTTTACTGTCTAAACATCCCCTAAGCCAAGTGAG----AACCCCATTGGCTCC-AAATG---AGTCTGCTTTGCTGGGG s panTro4.chr10 76463332 78 + 133524379 TCAAATGTTTTACTGTCTAAACATCCCCTAAGCCAAGTGAG----AACCCCATTGGCTCC-AAATG---AGTCTGCTTTGCTGGGG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76126344 78 - 133410057 TCAAATGTTTTACTCTCTAAACATCCCCTAAGCCAAGTGAG----AACCCCATTGGCTCC-AAATG---AGTCTGGTTTGCTGGGG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35067874 78 + 104879549 TCAAATGTTTTACTCTCTAAACATCCCCTAAGCCAAGTGAG----AACCCCATTGGCTCC-AAATG---AGTCTGGTTTGCTGGGG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73860638 78 - 130959383 TCAAATGTTTTACTCTCTAAATATCCCCTAAGCCAAGTGAG----AATCCCATTGGCTCC-AAATG---AGTCTGGTTTGCTGGGG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75421946 78 - 133195287 TCAAATGTTTTACTCTCTAAATATCCCCTAAGCCAAGTGAG----AATCCCATTGGCTCC-AAATG---AGTCTGGTTTGCTGGGG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73286469 78 - 125196307 tcaaatGTTTTACTCTCTAAATATCCCCTAAGCCAAGTGAG----AACCCCATTGGCTCC-AAATG---AGTCTGGTTTGCTGGGG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72118841 78 - 125710982 TCAAATGTTTTACTCTCTAAATATCCCCTAAGCCAAGTGAG----AACTCCATTGGCTCC-AAATG---AGTCTGGTTTGCTGGGG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75577729 79 - 121768101 TCAAATGTTTTACTCTCTAAGCATCCCCTAAGCCAAGTGAG----AACCCCATGGGCTCCAAAATA---AGTCTGGTTTGCTGGGG i calJac3.chr12 C 0 C 0 s canFam3.chr4 27738057 81 + 88276631 TCAAATGTCTGACACTCTAATCATCCCCTAAGCCAGGTGAGAACCAACCCCACTGGCTCC-AAAGACATAGACTGGTTT-CTG--- i canFam3.chr4 C 0 C 0 e mm10.chr14 24179848 2247 + 124902244 I a score=2833409.000000 s hg38.chr10_KI270825v1_alt 85482 895 + 188315 AACAAAGGA--GGCTGTCATTGCCTGAGTTCCCCACAAGGTGGCAGCCGCGGGGAGACGAGCCAACGCTCTCCTGCAGCGGCT---TCCCGCCTTCCCAGCTCAGAAACAAACTCATTCCAAAGGCAGCCTTGAAATGACACAAAGCCCGGTTCTGGGTGGTAGCCC-GCAGAGCCCACCTCCACAAGTGCTCGGCAGAA-TCAGGAGTCTATACC---ATGGTTTGGCCTCTT--TG-----C----------AGTCCCCTGAATG-GCTAACCTTGAGGGGCCTGGATCCGGGCCTGTGTG-------------ACAATCC------------------AGGGATGATTCAGGGCCGTGTGAATCAGGCTGCCAGCAAGGGCCGTGAGAGTGGGCCACGAATTCCCAGTGCGACAGGGTG--------GGT----------------CACAGACCTCGAGGTCCTTTCAGCTGCTCCC--CCCAGCCTTCA-TAACATGGTAGGATCCTCGGGT--CAGAAGACC--GAGAGAGAGAGATCAGGCCCCGTACTGCTTGCTTCCACCACGATGACGGCCACCCTCGGCCT------GCTCCACAAGTG-AAAGCTCCTTGGGATAGGGTCGTGCTCACCGGGAGCT--ACt----ccgcctccctgcaactcctaacctctggttctcactctagccttggagtcaaacagaataacctgttcccacagggcagcatccagatactcaaagaggctcgcagg--ccccaaacacttctcaccctttctctacaaacaGGACTCAGTGCCAGGCCTGTA-CTATGTAACCAACAGCCTCTGAACAAAGCTGGGGAA--CCAGGTCATGGTTAACTCCGGAGAATCCA--AAAAAC---TAAATCTATTGGTCTAGAATTTTTCCCTCTCGCCATCAGAGGATTATGTTCTTGGTAGGTATTTCcacatgcacatgcacacacga--gtgcg--cacacacacacacacacCT s panTro4.chr10 76463410 893 + 133524379 AACAAAGGA--GGCTGTCATTGCCTGAGTTCCCCACAAGGTGGCAGCCGCGGGGAGACGAGCCAACGCTCTCCTGCAGCGGCT---TCCCGCCTTCCCAGCTCAGAAACAAACTCATTCCAAAGGCAGCCTTGAAATGACACAAAGCCCGGTTCTGGGTGGTAGCCC-GCAGAGCCCACCTCCACAAGTGCTCGGCAGAA-TCAGGAGTCTATACC---ATGGTTTGGCCTCTT--TG-----C----------AGTCCCCTGAACG-GCTAACCTTGAGGGGCCTGGATCCGGGCCTGTGTG-------------ACAATCC------------------AGGGATGATTCAGGGCCGTGTGAATCAGGCTGCCAGCAAGGGCCGTGAGAGTGGGCCACGAATTCCCAGTGCGACAGGGTG--------GGT----------------CACAGACCTTGAGGTCCTTTCAGCTGCTTCC--CCCAGCCTTCA-TAACATGGTAGGATCCTCGGGT--CAGAAGACC--GAGAGAGAGAGATCAGGCCCCGTACTGCTTGCTTCCACCACGATGACGGCCACCCTCGGCCT------GCTCCACAAGTG-AAAGCTCCTTGGGATAGGGTCGTGCTCACCAGGAGCT--ACt----ccgcctccctgcaactcctaacctccggttctcactctagccttggagtcaaacagaataacctgttcccacagggcagcatccagatactcaaagacgctcgcagg--ccccaaacacttctcaccctttctctacaaacaGGACTCAGTGTCAGGCCTGTA-CTATGTAACCAACAGCCTCTGAACAAAGCTGGGGAA--CCAGGTCACGGTTAACTCCGGAGAATCCA--AAAAAC---TAAATCTATTGGTCTAGAATTTTTCCCTCTCGCCATCAGAGGATTATGTTCTTGGTAGGTATTTCcacatgcatgtgcacacacaa--gtgc----acacacacacacacacCT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76126422 887 - 133410057 AACAAAGGA--GACTGTCATTGCCTGAGTTCCCCACAAGGTGGCAGCCGCGGGGAGACGAGCCAACACTCTCCTGCAGTGGCT---TCCCGCCTTCCCAGCTCAGAAACAAACTCATTCTAAAGGCAGCCTTGAAATGACACAAAGCCCGGTTCTAGGTTGTAGCCC-GCAGAGCCCACCTCCACCAGTGCTCGGCAGAA-TCATGAGTCTATACC---ATGGTTTGGCCTCTT--TG-----C----------AGTCCCCTGAACG-GCTAACCTTGAGGGGCCTGGATCCGGGCCTGTGTG-------------ACAATCC------------------AGGGATGATTCAGGGCTGTGTGAATCAGGCTGCCAGCAAGGGCCGTGAGAGTGGGCCATGAATTCCCAGTGTGACAGGGTG--------GGT----------------CACAGACCTCGAGGTCCTTTCTGCTGCTTCC--CCCAGCCTTCA-TAACATGGTAGGATCCTCGGGT--CAGAAGACC----GAGAGAGAGATCAGGCCCCGTACTGCTT--TTCCACCACGATGACTGCCACC--CGGCCC------GCTCCACAAGTG-AAAGCTCCTTGGGATAGGGTTGTGCTCACCACgagct--act----ccgcctccctgcaactcctaacctccggttctcactctagccttggagtcaaacagaataacctgttcccacagagcagcatccagatactcaaagaggctcacaggccccccaaacacttctcaccctttctctacaaacaggactcagctccAGGCCCGTA-CTATGTAACCAACAGCCTCTGAACAAAGCTGGGGAA--CCAGGTCACGGTTAACTCTGGAGAATCCA--AAAAAC---TAAATCTATTGGTCTAGAATTTTTCCCTCTCGCCATCAGAGGATTATGTTCTCAGTAGGTATTTCCACATGCACGTGCACACACGA--GTGC------ACACACACACACACCT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35067952 906 + 104879549 AACAAAGGA--GGCTGCCATTGCCTGAGTTCCCCACAAGGTGGCAGCCGCGGGGAGACGAGCCAACACTCTCCTGCAGCAGCT---TCCCGCCTTCTCAGCTCAGAAACAAACTCATTCTAAAGGCAGCCTTGAAATGACACAAAGCCCGGTTCTGGGCGGTAGCCC-GCAGAACCCACCTCCACCAGTGCACGGCAGAA-TCAGGAGTCTATACC---ATGGTTTGGCCTCTT--TG-----C----------AGTCCCCTGAACG-GCTAACCTTGAGGGGCCTGGATCCGGGCCTGTGTG-------------ACAATCC------------------AGGGACGTTTCAGGGCCATGTGAATCAGGCTGCCAGCAAGAGCCATGAGAGTGGGCCACGAATTCCCAGTGCGACACGGTG--------GGTC-AGGGA-AATCCCAGCACAGACCTCGAGGTCCTTTCTGCTGCTCCC--CCCAGCCTTCA-TAACATGGTAGGATACTCGGGT--CAGAAGACC----GAGAGAGAGATCAGGCCCCATATTGCTTGCTTCCACCACGATGACCACCACCCTTGGCCC------GCTCCACAAGTG-AAAGCTCCTTGGGATAGGGTCGTGCTCACCACGAGCT--ACt----ccgcctccctgcaactcctaacctccggttctcactctagccttggagtcaaacagaataacctgttcccacagggcagcatccagatactctaagaGGCTCGCAAG-CCCCCAAACACCTCTCACCCTTTCTCTACAAACAGGACTCAGCGCCAGGCCTGTG-CTATGTAACCAACAGCCTCTGAACAAAGCTGGGGAA--CCAGGTCACGGTTAACTCCAGAGAATCCA--AAAAAC---TAAATCTATTGGTCTAGAATTTTTCCCTCTCACCATTAGAGGATTATGTTCTTGGTAGGTATTTCCACATGCACGTGCACACACGA--GTGc----acacacacacacacacTT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73860716 908 - 130959383 AACAAAGGC--GGCTGCCATTGCCTGAGTTCCCCACAAGGTGGCAGCCGCGCGGAGACGAGCCAATGCTCTCCTGTAGTGGCT---TCCCGCCTTCCCAGCTCAGAAACAATCTCGTTCTAAAGGCAGCCTTGAAATGATACAAAGCCGGGTTCTGGGCAGTAGCCCAGCAGAGCCCACCTCCACCAGTGCATGGCAGAA-TCAGGAGTCTATACC---ATGGTTCGGCCTCTT--TG-----C----------AGTCCCCTGAACA-GCTAACCTTGAGGGGCCTGGATCCAGGCCTGTGTG-------------ACAATCC------------------AAGGATGATTCAGGGCCGTGGGAATCAGGCTGCCAGAAAGGGCCATGAGAGTGGGCCACGAATTCCCAGTGCGACAGGGTG--------GGTC-AGGGA-AATCCCAGCGCAGACCTCGAGGTCCTTTCTGCTGCTCCC--CCCAGCCTTCA-TAACATGATGGGATACTCGGGT--CAGAAGA-C--GAGAGAGAGAGATCAGGCCCCATACTGC----TTCCACCACGATAACCGCCACCCTcggcct------gttccacaggtg-aaagctccttgggaaagggtcgtgctcaccacgagct--act----ccacctccctgcaactcctaacctccggttctcactctagccttggagtcaaacagaataacctgttcccacagggcagcaactagatactcaaagaggctcgcagg-cctccaaacacttctcACCCTTTCTCTACAAGCAGGACTCAGTGCCAGGCCTGTG-CCACCTAACCAACAGCCTCTGAACAAAGCTGGGGAA--CCAGGTCACGGTTAACTCCGGAGAATCCG--AAAAAC---TAAATCTATTGGTCTAGAACATTTCCCTGTCACCATTAGAGGATTATGTTCTTGGTAGGTATTTCCACGTGTacatgcacacacac--gcgcgcacgcacacacacacacaTCT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75422024 909 - 133195287 AACAAAGGC--GGCTGCCATTGCCTGAGTTCCCCACAAGGTGGCAGCCGCGCGGAGACGAGCCAATGCTCTCCTGTAGTGGCT---TCCCGCCTTCCCAGCTCAGAAACAATCTCGTTCTAAAGGCAGCCTTGAAATGATACAAAGCCGGGTTCTGGGCAGTAGCCCAGCAGAGCCCACCTCCACCAGTGCATGGCAGAA-TCAGGAGTCTATACC---ATGGTTCGGCCTCTT--TG-----C----------AGTCCCCCGAACA-GCTAACCTTGAGGGGCCTGGATCCAGGCCTGTGTG-------------ACAATCC------------------AAGGATGATTCAGGGCCGTGGGAATCAGGCTGCCAGAAAGGGCCATGAGAGTGGGCCACGAATTCCCAGTGCGACAGGGTG--------GGTC-AGGGA-AATCCCAGTGCAGACCTCGAGGTCCCTTCTGCTGCTCCC--CCCAGGCTTCA-TAACATGATGGGATACTCGGGT--CAGAAGACC--GAGAGAGAGAGATCAGGCCCCATACTGC----TTCCACCACGATAACCGCCACCCTcggcct------gttccacaggtg-aaagctccttgggaaaggctcgtgctcaccacgagct--act----ccacctccctgcaactcctaacctccggttctcactctagccttggagtcaaacagaataacctgttcccacagggcagcaactagatactcaaagaggctcgcagg-cctccAAACACTTCTCACCCTTTCTCTACAAGCAGGACTCAGTGCCAGGCCTGTG-CCACCTAACCAACAGCCTCTGAACAAAGCTGGGGAA--CCAGGTCACGGTTAACTCCGGAGAATCCG--AAAAAC---TAAATCTATTGGTCTAGAACATTTCCCTGTCACCATTAGAGGATTATGTTCTTGGTAGGTATTTCCACGTGTACATGcacacacac--gcgcgcacgcacacacacacacaTCT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73286547 911 - 125196307 AACAAAGGC--GGCTGCCATTGCCTGAGTTCCCCACAAGGTGGCAGCCGCGCGGAGACGAGCCAATGCTCTCCTGTAGCGGCT---TCCCGCCTTCCCAGCTCAGAAACAATCTCGTTCTAAAGGCAGCCTTGAAATGATACAAAGCCGGGTTCTGGGCAGTAGCCCAGCAGAGCCCACCTCCACCAGTGCATGGCAGAA-TCAGGAGTCTATACC---ATGGTTCGGCCTCTT--TG-----C----------AGTCCCCTGAACG-GCTAACCTTGAGGGGCCTGGATCCAGGCCTGTGTG-------------ACAATCC------------------AAGGATGATTCAGGGCCGTGGGAATCAGGCTGCCAGAAAGGGCCATGAGAGTGGGCCACGAATTCCCAGTGCGACAGGGTG--------GGTC-AGGGA-AATCCCAGCGCAGACCTCGAGGTCCTTTCTGCTGCTCCC--CCGAGCCTTCG-TAACATGATGGGATACTCGGGT--CAGAAGacc--gagagagagagatcagGCCCCATACTGC----TTCCACCACGATAACCGCCACCCTCGGCCC------GTTCCACAGGTG-AAAGCTCCTTGGGAAAGGGTCCTGCTCACCACGAGCT--ACT----CCGCCTCCCTGCAACTCCTAACCTCCGGTTCTCACTCTAGCCTTGGAGTCAAACAAAATAACCTGTTCCCACAGAGCAGCAACTAGATACTCAAAGAGGTTTGCAGG-CCTCCAAATACTTCTCACCCTTTCTCTACAAGCAGGACTCAGTGCCAGGCCTGTG-CTATGTAACCAACAGTCTCTGAACAAAGCTGGGGAA--CCAGGTCACGGTTAACTCCGGAGAATCCG--AAAAAC---TAAATCTATTGGTCTAGAACATTTCCCTGTCACCATTAGAGGATTATGTTCTTGGTAGGTATTTCCACATgtacgtgcacacacacgtgcgcgcacacacacacacacacatct i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72118919 911 - 125710982 AACAAAGGT--GGCTGCCATTGCCTGAGTTCCCCACAAGGTGGCAGCCGCGCGGAGACGAGCCAATGCTCTCCTGCAGCGGCT---TCCCGCCTTCCCAGCTCAGAAACAAACTCGTTCTAAAGGCAGCCTTGAAATGATACAAAGCCGGGTTCTGGGCAGTAGCCCAGCAGAGCCCACCTCCACCAGTGCATGGCAGAA-TCAGAAGTCTATACC---ATGGTTCGGCCTCTT--TG-----C----------AGTCCCCTGAACG-GCTAACCTTGAGGGGCCTGGATCCAGGCCTGTGTG-------------ACAATCC------------------AAGGACGATTCAGGGCCGTGGGAATCAGGCTGCCAGAAAGGGCCATGAGAGTGGGCCACGAATTCCCAGTGCGACAGGGTA--------GGTC-AGGGA-AATCCCAGCGCAGACCTCGAGGTCCTTTCTGCTGTTCCC--CCCAGCCTTCA-TAACATGATGGGATACTCGGGT--CAGAAGACCGAGAGAGAGAGAGATCAGGCCCCATACTGC----TTCCACCACGATAACCGCCACCCTcagcct------gttccacaggtg-aaagctccttgggaaagggtcgtgctcaccacaagct--act----ccgcctccctgcaactcctaacctccggttctcactctagccttggagtcaaacagaataacctgttcccacagggcagcaaccagatactcaaagaggctcgcagg-cctccAAACACTTCTCACCCTTTCTCTACAAGCAGGACTCCGTGCCAGGCCTGTG-CTACGTAACCAACAGCCTCTGAACAAAGCTGGGGAA--CCAGGTCACGGTTAACTCCGGAGAATCCG--AAAAAC---TAAATCTATTGGTCTAGAATATTTCCCTCTCACCATTAGAGGATTATGTACTTGGTAGGTATTTCcacgtgtacgtgcacacacat--gcgcgcacgcgcacacacacATATCT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75577808 944 - 121768101 AACAAAGAC--GGCTGCCATTGCCTGAGTTCCCCACAAGGTGGCAGCGATAGGTAGACAAGCCAATGCTCTTCCACAGTGGCC---TTCCACCTTCC-----CAGAAACAAACTCATTCTAAAGGCAGCTTTGAAATGACACAAAGCCAGGTTCTGGACGGTAGCCCAGCAGCGCCCACTTCCACCAGTGCAGGATAGAA-TCAGGAGTCTATGCC---ACGGTTCAGCCTTTC--TT-----CACTGGGAAATAGTCCCCTGAACG-CCTAGCCTTGAGGGAC---GAGTCAGGGCCGTGTGAATTCATTGGGAAACAGTCCCCTGAACGCCTAGCCTTGAGGGACAATTCAGGGCTGTGTGAATCAGGCTGCCCGAATGGGCCGTGACAGTGGGCCACAAATTCCCAGTGCGACAGGGTGACAGGGTCGGTC-AAGGA-AACCCCAGCACAGACCTCTGGGTCCTTTCTGATGCTGCC--CCCAGCCTTCATTAACACAGTGAGATCCTCCCGT---GGAAGACA--TTGGGAGAGAGATCAAGCCGTTAACTGC----TTCCACTGCAATGACCGCCACCCCC-GCCA------GCTCCACAGGCA-AAAGCTC-----GCAGCTGCCCTACTCACCAGGAGCT--ACTCCGCccgcctccctgcaactcctaacctctgggtctcaccctacctttggagttaaacagaataaCTTGTTCCCACAGGGCAGTGTCCCCATACTCAAACAGGATCGCAGG-CCCCAAAACACTTCTCACCCTTTCTCTATAAGCAGGACTCAGCACCAGGCCTGCG-CTATGTAACCAACAGCCTCTGAACAAAGCTAGGGAA--CCAGG-CTCGGTTAACTCCAGAGAATCCG--AATAACAGTCCTATCTATCAGTCTAGAATTTTTCCCTCTCACCATTATAAGATTATGTTCTTGGTAGGTATTTCcacatgcacacacacacacac--atac------acagagacacacacCT i calJac3.chr12 C 0 C 0 s mm10.chr14 24182095 784 + 124902244 AACAAAGGCAGAGCTGCCATACTCCGAGTTGCCCACAAGAGGGCAGCAGTACGAACACA--------------------GGCT---CTCCAGCTTTC--ATTAAGAAAC--CCTCATTCTCAAGGCAGCC--------------AG-------CTTGGCGGCAGCAC---------CATCTTCACCAGTCCACAAGACAACTCTGGATTCTGTGCCACTACAGCTCGTCCTTTTACTGAGAACC----------AGTTTCCCAAACACCCTAACTCGGAGGAGCTTAGCGCCAAGTGTGCTGA-------------ACGACCC------------------A------------GGCTGTCTGGAT-ATGCTTCC---------------------------ATTCCTGGTAAGGCAGGTCA--------GGCCTAGGCA-AATGCTGATGCCAACCCAAGTGTCCTTTATGCTGCTCAG--CACAGCTCGGA-CAATGCGGTGAGTTGGTAGGGTCCCAAGAGATT--G-GTGAGAGAGGGCAGATC-TGCCCTGT----TTCCACCATGGTTGCCTCCA----GGGCACAGTGGGGTTCCCTGGGTGTAAAACCCCAAGTGAAGAGGTAATCC----------CA--GCT----CCACCTCCCTGTACCTCCTAGCCTCTG--CCTTGCTACAGCCTTGGGG--------AGGCATCGGCTCCCACAGGACAGCATCCAGAC-CTTAAAGAGGCCCCCAGA--CTCCGAGCATTTCTCAAGTTCTC---ATACAC-GGGCTCAGACTCAAGCCTGCA-CTTTATCATCAACAGCCTCATAG-AAACCAGGGAAA--GCTGCAGTCGTGTGACTCCCCGAGACCTGGAAAAGAT---GCTATCTGCCAGGCCAGAGCATTTTCTGTTCATCAGTAGAAGATTATATTCTTAGTGG------------------AAGGGCACAA--GTGC------ACACAGACACACACtt i mm10.chr14 I 2247 I 2241 s canFam3.chr4 27738138 836 + 88276631 --CAAAGGCCTTGCTGCTGTTCTCAGACTCGCCCGCTAGGTGGCAGCCCTGGGTAGACAGGCCGAGGCTCTCCTGCAGTTGCCACATCTGAGCTTC---ATCAAGAAACAAACTAGTTCTAAAGGCAGCCTTGACACAGCACAAAGCCCTCACCTTGG-----GCCTTGC------TATCTTCACAAGTCCACAACAGAC-TCTGGGGTCTACACC---ATGGCTTGGCCTTTC--TT-----CCCTGGGAAACAGTCCCCCAAATGCTCCAACCGTGAGGAGCTTGGATTGGAGCCTGCCTG-------------ACAATCC------------------A-----------GGGCAGAGTGAA-CTGGATGCCAGGAT--------------GGTCACAAGATCC-GGGGAGACAGCGTT--------AGTC-AGGGAGAACCCTAGAGCAGACCCAGAAATCCCTTCTGATGCTCACAGTCCAGCTCTGA-TCACGTGGTGGGA-CCTGGGAC--CCTCAGGCT---------------CACAGCCTGTGTTGT----TCTGGCCA----------------CGGCCC------TACCCCCAGGTG-AACACTC-GCAGGACCaggtcttgcctatttcaa-ctgaaat----ttgccttcct-caactcctaccctcttgttcccattctagccct--agtcacgtagaaggatccctttccacgggacagcatccagacactcaaagaggctcacggg-cccccaaacacttctcGACTTTCCTCTACAAGCAGGGCTCAGAATCATGCCTGGGTCAATGTGATC-ACAGCCTCTGAAGAAGTTTGGAAAAATCATGGTCATAGTTAACTCCAGAGAAT-TG--AAAATC---TATCCTATTTAGTATAGAATTTTTCCTTTCTATAATCAGATGATTATAGTCTTATTAGGTAGTTCATCCTT----TGTGCACACAT--GTGC------ACACACATG------- i canFam3.chr4 C 0 C 0 a score=255476.000000 s hg38.chr10_KI270825v1_alt 86377 76 + 188315 AACTACAGTCAAATGTTTAGCTTCCCAGCAAAAGCTAATG-----------AAGAGAGAATATTTAAATTTGGCCCAGAATTCTAAA s panTro4.chr10 76464303 76 + 133524379 AACTACAGTCAAATGTTTAGCTTCCCAGCAAAAGCTAATG-----------AAGAGAGACTATTTAAATTTGGCCCAGAATTCTAAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76127309 76 - 133410057 AACTACAGTCAAATGTTTAGCTTCCCAGCAAAAGCTCATG-----------AAGAGAGAACATTTAAATTTGGCCCAGAATTCTAAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35068858 76 + 104879549 AACTACAGTTAAATGTTTAGCTTCCCAGCAAAAGCTAATG-----------AAGAGAGAACATTTAAATTTGGCCCAGAATTCTAAA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73861624 77 - 130959383 AACTGCAGTCAAATGTTTGGCTTCCCAGCAAAGGCTAATGA----------AAGAGAGAACATTTAAATTTGGCCCAGAATTCTAAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75422933 77 - 133195287 AACTACAGTCAAATGTTTAGCTTCCCAGCAAAGGCTAATGA----------AAGAGAGAACATTTAAATTTGGCCCAGAATTCTAAA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73287458 77 - 125196307 aacTACAGTCAAATGTTTAGCTTCCCAGCAAAGGCTAATGA----------AAGAGAGAACATTTAAATTTGGCCCAGAATTCTAAA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72119830 77 - 125710982 AACTACAGTCAAATGTTTAGCTTCCCAGCAAAGGCTAATGA----------AAGAGAGAACATTTAAATTTGTCCCAGAATTCTAAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75578752 76 - 121768101 AACTACAGCCAAATGTTTAGCTTCCCAGCAAAGGCCAAGGA----------AAGAGAGAACATTTTAATTTGGCCCAGAATTCT-AA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27738974 76 + 88276631 ---------CAAATGTTTAGCTTCCCAGC-AAGGCAAGTGGAATTCCAAGTGAGAGAGAATATCT-AATTCGGCCCAGAATTCTCAA i canFam3.chr4 C 0 I 304 e mm10.chr14 24182879 2241 + 124902244 I a score=581792.000000 s hg38.chr10_KI270825v1_alt 86453 199 + 188315 ATTAAAgtg--------------------------------------------------------------------------atcacagttcactgcaacctcaacctcccaggctcaagtgatcctcctgcctccgcctcccaagtagctgggaccacagacacgccccaccacacctggctga-ttttttattttttgtagagatgggg--------gtctcactatgttgcccaggctggtcttgaactcctagactcaagtgatacacccactttgg s panTro4.chr10 76464379 199 + 133524379 ATTAAAgtg--------------------------------------------------------------------------atcacagttcactgcaacctcaacctcccaggctcaagtgatcctcctgcctcagcctcccaagtagctgggaccacagacacgccccaccacacctggctga-ttttttattttttgtagagatgggg--------gtctcactatgttgcccaggctggtcttgaactcctagactcaagtgatacacacactttgg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76127385 202 - 133410057 ATTAAAgtg--------------------------------------------------------------------------atcacagttcactgcaacctcaacctcccaggctcaagtgatcctcctgcctcagcctcccaagtagctgggacgacagacacgccccaccacacctggctaa-ttttttattttttgtagagatgggg----gga-gtctcactatgttgctcaggctggtcttgaactcctagactcaagtgatacacccactttgg i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35068934 199 + 104879549 ATTAAAgtg--------------------------------------------------------------------------atcatagttcactgcaacctcaacctcccaggctcaagtgatcctcctgcctcagcctcccaagtagctgggatcacaaacacaccccaccacacctggctaa-ttttttattttttgtagagatgggg--------gtctcactatgttgcccaggctggtcttgaactcctagactcaagtgatacatccactttgg i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73861701 206 - 130959383 ATTAAAgtg--------------------------------------------------------------------------atcacagttcactgcaacctcaacctcccaggctcaagtgagcctcctgcctcagcctcccaagtagctgggatcacaggcatgccccaccacacctggctaa-ttttttattttgtgtagagattgggcagcagg-gtctcactatgttgcccaggctggtcttgagctcctagactcaagtgatgcaccggcttcgg i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75423010 206 - 133195287 ATTAAAgtg--------------------------------------------------------------------------atcacagttcactgcaacctcaacctcccaggctcaagtgagcctcctgcctcagcctcccaagtagctgggatcacaggcatgccccaccacacctggctaa-ttttttattttgtgtagagatggggcagcagg-gtctcactatgttgcccaggctggtcttgagctcctagactcaagtgatgcaccggcttcgg i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73287535 206 - 125196307 ATTCaagtg--------------------------------------------------------------------------atcacagttcactgcaacctcaacctcccaggctcaagtgagcctcctgcctcagcctcccaagtagctgggatcacaggcatgccccaccacacctggctaa-ttttttattttgtatagagatggggtggcggg-gtctcaccatgttgcccaggctggtcttgagctcctagactcaagtgatgcACCGGCTTCGG i papAnu2.chr9 C 0 I 341 s chlSab2.chr9 72119907 207 - 125710982 ATTAAAgtg--------------------------------------------------------------------------atcacagttcactgcaacctcaacctcccaggctcaagtgagcctcctgcctcagcctcccaagtagctgggatcacaggcatgccccaccacacctggctaa-ttttttattttgtatagagatgggggggggggtgtctcactatgttgcccaggctggtcttgagctcctagactcaagtgatgcaccggcttcgg i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75578828 274 - 121768101 ATTAAAGAGAGTCAACttcttttttttttttttttttttgagacaggttcttgcttggctccaggctggagcacagtggcacaatcacagttcactgcaacctcaacctcccaggctcaagtgatcctcctgcctcagcctcccaagaagctgggaccacaggcacagcccaccacactcagctaatttttttagtttttgtagagatgggg--------gtctccctatgttgcccaggctgctcttgaactcctagactcaagtgatgcacccacctggg i calJac3.chr12 C 0 C 0 e canFam3.chr4 27739050 304 + 88276631 I e mm10.chr14 24182879 2241 + 124902244 I a score=863548.000000 s hg38.chr10_KI270825v1_alt 86652 402 + 188315 cttcccaaagtgctaagattacaggcgtgagccc-tgagcctggccTGAGAGTCAACTTTTCCACTCAGGCAGGCAGCAGTCTTTAGAGATGATGTCCCTCCAGCCTGAGCACGGGACAGTTGGCCTGTGAGTTCAAGGGGCTTAGGAGAAATGGGTGGAAGTTGCACAGGGGAGGCACAAAGACAGCCACAGTCTAAGCTGTTCCCTGCAGGGAGGCCAGGAAGAGACCAACCCTCCTACCTGTACCCTACATTGGTCAGAACACTCCTCTGTGGGCTTCTCTGTAAGGGATGCCCTTCAGCAACCAGGAAACCCCTCTCCTCTCTTCCTTCCTCCAGGCCCATCAAAGGGCATTCATTCAGGATACCTGGGACAAGAAAATCAACTTTCATGAATTACAAG s panTro4.chr10 76464578 403 + 133524379 cttcccaaagtgctaagattacaggcgtgagcccctgagcctggccTGAGAGTCAACTTCTCCACTCAGGCAGGCAGCAGTCTTTAGAGATGATGTCCCTCCAGCCTGAGCACGGGACAGTTGGCCTGTGAGTTCAAGGGGCTTAGGAGAAATGGGTGTAAGTTGCACAGGGGAGGCACAAAGACAGCCACAGTCTAAGCTGTTCCCTGCAGGGAGGCCAGGAAGAGACCAACCCTCCTACCTGTACCCTACATTGGTCAGAACACTCCTCTGTGGGCTTCTCTGTAAGGGATGCCCTTCAGCAACCAGGAAACCCCTCTCCTCTCTTCCTTCCTCCAGGCCCATCAAAGGGCATTCATTCAGGATACCTGGGACAAGAAAATCAACTTTCATGAATTACAAG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76127587 403 - 133410057 cttcctaaagtgctaagattacaggcgtgagcccctgagcctggccTGAGAGTCAACTTCTCCACTCAGGCAGGCAGCAGTCTTTAGAGACAATGCCCCTCCAGCCTGAGCACAGGACAGTTGGCCTGTGAGTTCAAGGGGCTTAGGAGAAATGGGTGGAAGTTGCACAGGGGAGACACAAAGACAGCCATACTCTAAGCTGTTCCCTGCACGGAGGCCAGGAAGAGACCAACCCTCCTACCTGTACCCTACATTGGTCAGAACACTCCTCTGTGGGCTTCTCTGTAAGGGATGCCCTTCAGCAACCAGGAAACCCCTCTCCTCTCTTCCTTCCTCCAGGCCCATCAAAGGGCATTCATTCAGGATACCTGGGACAAGAAAATCAACTTTCATGAATTACAAG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35069133 401 + 104879549 cttcccaaattgctaagattacaggtgccagcccctgagcctggccTGAGAGTCAACTTCT-CACTCAGGCAGGCAGCAGTCTTTAGAGACGATGCCCCTCCAGCCTGAGCACAGGACAGTTGGCCTATGAGTTCAAGGGGCTTAGGAGAAACGGGTGGAAGTTGCACAGGGGAGGCACAAAGACAGCCATAGTCTGAGCTGTTCCCAGCAGGGAGGCCAGGAAGAGACCAACCCTCCTACCTGTACCCTACACTGGTCAGAACACTCCTCTGTGGGCTTCTCTGTAAGGGATGCCCTTCAGCCACCAGGAAACCCCTCTCCT-GCTTCCTTCCTCCAGGCCCATCAAAGGGCATTCATTCAGGATACCTGGGACAAGAAAATCGACTTTCATGAATTACAAG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73861907 391 - 130959383 cctcccaaagtgctaagattacaggtgtgagcccctgagcctggccTGAGAGTCAACTTCTCCCCTCAGGCAGGCAGCAGTCTTTAGAGATGATGCCCTGCCGGCCTGAGCACAGGACAGTTGGCCTGTGAGTTTA--------AGGAGAAGGGGGTGGAAGTTACACTGGGGAGGTACAAAGACAGCCATAGTCTGGGCTGCTCCCTGCAGGGAGGCCAGGAAGAGACCAACCCTCCTACCTGTACCCCACACTGGTCAGAACACTCCTCTGTGGGCTTCTCTGTAAGGGATGCCCTTCAGCAACCAGGAAACCCCTCTCCT----CCCTTCTTTCAGGCCCATCAAAGGGCATTCATTCAGGATACCTGGGACAAGAAAATCGACTTTCATGAATTACAAG i rheMac3.chr9 C 0 I 317 s macFas5.chr9 75423216 391 - 133195287 cctcccaaagtgctaagattacaggtgtgagcccctgagcctggccTGAGAGTCAACTTCTCCCCTCAGGCAGGCAGCAGTCTTTAGAGATGATGCCCTGCCGGCCTGAGCACAGGACAGTTGGCCTGTGAGTTTA--------AGGAGAAGGGGGTGGAAGTTACACTGGGGAGGCACAAAGACAGCCATAGTCTGGGCTGCTCCCTGCAGGGAGGCCAGGAAGAGACCAACCCTCCTACCTGTACCCCACACTGGTCAGAACACTCCTCTGTGGGCTTCTCTGTAAGGGATGCCCTTCAGCAACCAGGAAACCCCTCTCCT----CCCTTCTTTCAGGCCCATCAAAGGGCATTCATTCAGGATACCTGGGACAAGAAAATCGACTTTCATGAATTACAAG i macFas5.chr9 C 0 I 317 s chlSab2.chr9 72120114 391 - 125710982 cctcccaaagtgctaagatgacaggtgtgagcccctgagcctggccTGAGAGTCAACTTCTCCCCTCAGGCAGGCAGCAGTCTTTAGAGATGATGCCCCGCCGGCCTGAGCACAGGACAGTTGGCCTGTGAGTTTA--------AGGAGAAGGGGGTGGAAGTTACACTGGGGAGGCACAAAGACAGCCATAGTCTGGGCTGCTCCCTGCAGGGAGGCCAGGAAGAGACCAACCCTCCTACCTGTACCCCACACTGGTCAGAACACTCCTCTGTGGGCTTCTCTGTAAGGGATGCCCTTCAGCAACCAGGAAACCCCTCTCCT----CCCTTCTTTCAGGCCCATCAAAGGGCATTCATTCAGGATACCTGGGACAAGAAAATCGACATTCATGAATTACAAg i chlSab2.chr9 C 0 I 312 s calJac3.chr12 75579102 332 - 121768101 ccttccaaagtgctaagattacaggcgtgagtcC-----------------------------------------------------------------------CGGAGCACAGGACAGATGGCCTGTGAGTTCAAGGGGCTTAGGAGAAGGGGTTGGAAGTTTCATAGGGGAGGCACAAAGACAGCCATAGTCTGAGCTGCTCCCTGCAGGGAGGCGGGGAAGAGACCAACCCTCCGATCTGTATCCCACCCTGGTCAGAACACTCCTTCCTCAGCTTCTCTGTAAGGGATGCCTTTCAGCAATGAGGAAACCCCTCTCCTCCCTTCCTTCCTCCGGGCCCATGAAAGGGCACTGGTGTAGGATATCTGGGACCAGAAAATCGACTCTCATGTATTACAAG i calJac3.chr12 C 0 C 0 e canFam3.chr4 27739050 304 + 88276631 I e mm10.chr14 24182879 2241 + 124902244 I e papAnu2.chr9 73287741 341 - 125196307 I a score=794845.000000 s hg38.chr10_KI270825v1_alt 87054 264 + 188315 AGAAAGTATATTTTAAAGACAGGGGAAAGGGCAAGGAGGAGGAGAGAGAAGACTCTCGGGGCCTGAGAGGTTT--------------------------------CCCAAATAGAttagcaggacctaggagaacatgtgcactgccctggtcccaggaattctacctgtaaggctcaaacttcaaaacatgtgtgcaaaagaacacaaagacatgtgtgtccactgaaacatggtttgt-aacatgggaagatGTTGACCACCAAGACGCTCCACACAGAATTCGATTAACACCTG s panTro4.chr10 76464981 264 + 133524379 AGAAAGTATATTTTAAAGACAGGGGAAAGGGCAAGGAGGAAGAGAGAGAAGACTCTCGGGGCCTGAGAGGTTT--------------------------------CCCAAATAGAttagcaggacctaggagaacatgtgcactgccctggtcccaggaattctacctgtaaggctcaaacttcaaaacatgtgtgcaaaagaacacaaagacatgtgtgtccactgaaacatggtttgt-aacatgggaagatGTTGACCACCAAGACGCTCCACACAGAATTCGATTAACACCTG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76127990 264 - 133410057 AGAAAGTATATTTTAAAGACAGGGGAAAGGGCAAGGAGGAGGAGAGAGAAGACTCTCGGGGCCTGAGAGGTTT--------------------------------CCCAAATAGATTGGCAGGAACTAGGAGAACATGTGCACTGCCCTGGTCCCAGGAATTCTACCTGTAAGGCTCAAACTTCAAAACGTGTGTGCAAAAGAGCACAAAGACATGTGTGTCCACTGAAACATGGTTTGT-AACATGGGAAGATGTTGACCACCGAGACGCTCCACACAGAATTCGATTAACACCTG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35069534 262 + 104879549 AGAAAGTATATTTTAAAGACAGGGGAAAGGGCAAGGAAGAGGAGAGAGAAGACTCTCGGGGTCTGAGAGGTTT--------------------------------CCCAAATAGATTGGCAGGACCTAGGAGAACATGTGCACTGCCCTGGTCCCAGGAATTCTACCTGTAAGGCTCAAACTTCAAAACGTGTGTGCAAAAGAGCACAAAGACATGTGTGTCCACTGAAACATGGTTTGTAAACACGGGAAGATGTTGACCACCAAGACGCTCC---CAGAATTCGATTAACACCTG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73862615 296 - 130959383 AGAAAGTATATTTTAAAGACAGGGGAAAGGGCAAGGAGGAGGAAACAGAAGACTCTTGGGGCCTGAGAGGTTTGGCAAGGAGGAGGAAACAGAAGACTCTTTGGGCCCAGATAGATTGGCAGGACCTAGGAGAACATGTGCACTGCCCTGGTCTCAGGAATTCTACCTGTAAGGCTCAAACTTCAAAACGTGTGTGCAAAAGAGCACAAAGACATGTGTGTCCACTGAAACATGGTTTGT-AACATGGGAAGATGTTGACCACCAAGACGCTCCACACAGAATTTGATTAACACCTG i rheMac3.chr9 I 317 C 0 s macFas5.chr9 75423924 264 - 133195287 AGAAAGTATATTTTAAAGACAGGGGAAAGGGCAAGGAGGAGGAAACAGAAGACTCTTGGGGCCTGAGAGGTTT--------------------------------CCCAGATAGATTGGCAGGACCTAGGAGAACATGTGCACTGCCCTGGTCTCAGGAATTCTACCTGTAAGGCTCAAACTTCAAAACGTGTGTGCAAAAGAGCACAAAGACATGTGTGTCCACTGAAACATGGTTTGT-AACATGGGAAGATGTTGACCACCAAGACGCTCCACACAGAATTTGATTAACACCTG i macFas5.chr9 I 317 C 0 s papAnu2.chr9 73288082 264 - 125196307 agaaagtatattttaaagacaggggAAAGGGcgaggaggaggagacagaagACTCTTGGGGCCTGAGAGGTTT--------------------------------CCCAGATAGATTGGCAGGACCTAGGAGAACATGTGCACTGCCCTGGTCTCAGGAATTCTACCTGTAAGGCTCAAACTTCAAAACGTGTGTGCAAAAGAGCACAAAGACATGTGTGTCCACTGAAACACGGTTTGT-AACATGGGAAGATGTTGACCACCAAGACGCTCCACACAGAATTTGATTAACACCTG i papAnu2.chr9 I 341 C 0 s chlSab2.chr9 72120817 264 - 125710982 AGAAAGTATATTTTAAAGACAGGGGAAAGGGCAAGGAGGAGGAGACAGAAGACTCTTGGGGCCTGAGAGGTTT--------------------------------CCCAGATAGATTGGCAGGACCTAGGGGAACATGTGCACTGCCCTGGTCTCAGGAATTCTACCTGTAAGGCTCAAACTTCAAAACGTGTGTGTAAAAGAGCACAAAGACACGTGTGTCCACTGAAACACGGTTTGT-AACATGGGAAGATGTTGACCACCAAGACGCTCCACACAGAATTTGATTAACACCTG i chlSab2.chr9 I 312 C 0 s calJac3.chr12 75579434 254 - 121768101 AGAAAGTATATTTTAAAGACAGGAGAAAGGGCAGGGGGGAGGAGAGAGAACGTTCTTGGGGCCTGAGAAGTTT--------------------------------CCCACACAAATTGGCAGGACCTAGGAGAACATGTGCACT------GTCCCAGAAATTCTACCCATAAGGCTCAAACTTCAAAACGTGTGTACAAAAGAGCATAAAG--ATGTGTGTCCACTGAAACACGGTCTGT-AACAT-GGAAGATACTGGCCACCAAGAGGCTCCAAAGAGAATGCAATTCACACAT- i calJac3.chr12 C 0 C 0 e canFam3.chr4 27739050 304 + 88276631 I e mm10.chr14 24182879 2241 + 124902244 I a score=251256.000000 s hg38.chr10_KI270825v1_alt 87318 75 + 188315 ACAGACAACAAAACAAGCAAGGACCTTTTTGTATGTGCAAATTCACAGAAAATGTAAGGAAACCCATGATATATT s panTro4.chr10 76465245 75 + 133524379 ACAGACAACAAAACAAGCAAGGACCTTTTTGTATGTGCAAATTCACAGAAAATGTAAGGAAACCCATGATATATT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76128254 75 - 133410057 ACAGACAACAAAACAAGCAAGGACCTTTTTGTATGTGCAAATTCACAGAAAATGTAAGGAAACCCATGATATATT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35069796 75 + 104879549 ACAGACAACAAAACAAGCAAGGACCCTTTTGGATGTGCAAATTCACAGAAAATGTAAGGAAACCCATGACATATT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73862911 75 - 130959383 ACAGACAACAAAACAAGCACGGACCTTTTTGGATGTGCAAATTCACAGAAAATGTAAGGAAACCCATGATATATT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75424188 75 - 133195287 ACAGACAACAAAACAAGCACGGACCTTTTTGGATGTGCAAATTCACAGAAAATGTAAGGAAACCCATGATATATT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73288346 75 - 125196307 ACAGACAACAAAACAAGCAAGGACCTTTTTGGATGTGCAAATTGACAGAAAATGTAAGGAAACCCATGATATATT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72121081 75 - 125710982 ACAGACAACAAAACAAGCAAGGACCTTTTTGGATGTGCAAATTCACAGAAAATGTAAGGAAACCCATGATATATT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75579688 72 - 121768101 ---GACAACCAAACAAACAAGGACCTTTCTGGATGCACAAATTCACAGAAAACGTAAGGGGACCCATGATGTGTT i calJac3.chr12 C 0 C 0 s mm10.chr14 24185120 75 + 124902244 ACAATTAACAGTAAAATAGAGCAGATGTCCGGATGTTCAAAACAACAGACAGTGCAAGGTGGCCCATGATACATT i mm10.chr14 I 2241 I 21 e canFam3.chr4 27739050 304 + 88276631 I a score=29375.000000 s hg38.chr10_KI270825v1_alt 87393 15 + 188315 GTAGGATTTTTTTTT-- s panTro4.chr10 76465320 16 + 133524379 GTAGTATTTTTTTTT-T i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76128329 17 - 133410057 GTAGGATTTTTTTTTTT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35069871 15 + 104879549 GTAGGATTTTTTTTT-- i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73862986 17 - 130959383 GTAGGATATTTGTTTTG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75424263 17 - 133195287 GTAGGATATTTGTTTTG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73288421 17 - 125196307 GTAGGATATTTGTTTTG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72121156 17 - 125710982 GTAGGATATTTGTTTTG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75579760 15 - 121768101 ATAGGATTTTTTTTT-- i calJac3.chr12 C 0 C 0 e canFam3.chr4 27739050 304 + 88276631 I e mm10.chr14 24185195 21 + 124902244 I a score=395495.000000 s hg38.chr10_KI270825v1_alt 87408 134 + 188315 AAAGCAGGTTTCAGGGAATAAAAATTAAA-CT--ATATGGGTATTAAATGTGACATT-AAAAAAAAAATCTACAAGGATACACATCCATCCCAATGGTTTACACAGAGGATGGTCATTTCCACAAAGCTAGGCTG----GAT s panTro4.chr10 76465336 135 + 133524379 AAAGCAGGTTTCAGGGAATAAAAAATAAAACT--ATATGGGTATTAAATGTGACATT-AAAAAAAAAATCTACAAGGATACACATCCATCCCAATGGTTTACACAGAGGATGGTCATTTCCACAAAGCTAGGCTG----GAT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76128346 136 - 133410057 TAAGCAGGTTTCAGGAAATAAAAAATAAAACT--ATATGGGTATTAAATGTGACATTAAAAAAAAAAACCTACAAGGATACACATCCATCCCAATGGTTTACACAGAGGATGGTCATTTCCACAAAGCTAGGCTG----GGT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35069886 135 + 104879549 TAAGTAGGTTTCAGGGAATAAAAAATAAAAGT--ATATGGGTATTAAATGTGACATT-AAAAAAAAAATCTACAAGGATACACATCCATCCCAAGAGTTTACACAGAGGATGGTCATTTCCACAAAGCTAGGCTG----GGT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73863003 136 - 130959383 AAAGCAGGTTTCAGGGAACAAAAAACAAAACT--ACATGAGTATTAAATGTGACATTTAAAAAAAAAATCTACAAGGATCCACATCCATCCCAATGGTTTACCCAGAGGATGGTCATTTCCACAAAGCTAGGCTG----GGT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75424280 136 - 133195287 AAAGCAGGTTTCAGGGAACAAAAAACAAAACT--ACATGAGTATTAAATGTGACATTTAAAAAAAAAATCTACAAGGATCCACATCCATCCCAATGGTTTACCCAGAGGATGGTCATTTCCACAAAGCTAGGCTG----GGT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73288438 136 - 125196307 AAAGCAGGTTTCagggaacaaaaaacaaaact--atatgaGTATTAAatgtgacattaaaaaaaaaaatctacaaggaTCCACATCCATCCCAATGGTCTACCCAGAGGATGGTCATTTCCACAAAACTAGGCTG----AGT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72121173 136 - 125710982 AAAGCAGGTTTCAGGGAACAAAAAACAAAACT--ATACGAGTATTAAATGTGACATTTAAAAAAAAAATCTACAAGGATCCACATCCATCCCAATGGTTTACCCAGAGGATGGTCATTTCCACAAAGCTAGGCTG----GGT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75579775 126 - 121768101 -AGGCACGTTTCAGGGAATACAAA-CAAAACT--GTATGAGTATTAAATGTGGCAT----AAAAAAAATCTACAAGGATACA----CATCCCAGTGGTTTACACAGAGGCTGGTCACTTCCACAAAGCTAGGCTG----GGT i calJac3.chr12 C 0 C 0 s mm10.chr14 24185216 125 + 124902244 AAGGCAAATTTGAGAGAG---AAAAGAAGGCTTCATGTGTGTGTTACACATGAAAT--AGGGGAAAATGTTACAAGAA--CATGTGCAC----ATGGT------AGAAGTTGGTCATTTCTGCAAAATAAGACCAAACCAGT i mm10.chr14 I 21 C 0 e canFam3.chr4 27739050 304 + 88276631 I a score=761773.000000 s hg38.chr10_KI270825v1_alt 87542 254 + 188315 CTGAG--TAGGTGGGTGGCTGC---CCACATTGGTTGAAGATTTTTTTTCTATTTTAACTAAAGAATACACACTATTTTAGTAAAG-AAAAAAGATGCAAAAACACCCTCTACTT-AGATTCCCCAACCAAGCCTTGT-----------CAGGGTCTTCTGGGCATTCTTGACACA-GCCTAGAAGAATCCAAGAAGGTGCACTCGGACTGCCCAAACCCAGAGATGGGGAT----GCCAGGCAGAGGCCCTCCCCAGC------------AAAACACACAT------------------------AT-GGACA s panTro4.chr10 76465471 254 + 133524379 CTGAG--GAGGTGGGTGGCTGC---CCACATTGGTTGAAGATTTTTTTTCTATTTTAACTAAAGAATACACACTATTTTAGTAAAG-AAAAAAGATGCAAAAACACCCTCTACTT-AGATTTCCCAACCAAGCCTTGT-----------CAGGGTCTTCTGGGCATTCTTGACACA-GCCTAGAAGAATCCAAGAAGGTGCACTCGGACTGCCCAAACCCAGAGATGGGGAT----GCCAGGCAGAGGCCCTCCCCAGC------------AAAACACACAT------------------------AT-GGACA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76128482 256 - 133410057 CTGAGACGGGGTGGGTGGCTGC---CCACATTGGTTGAAGATTTTTTTTCTATTTTAACTAAAGAATACACACTATTTTAGTAAAG-AAAAAAGATGCAAAAACACCCTCTACTT-AGATTCCCCAGCCAAGCCTTGT-----------CAGGGTCTTCTGGGCATTCTTGACACA-GCCTAGAAGAATCCAAGAAGGTGCACTCGGACTGCCTAAACCCAGAGATGGGGAT----GCCAGGCAGAGGCCCTCCCCAGC------------AAAACACACAT------------------------AC-GGACA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35070021 255 + 104879549 CTGAG--GAGGTGGGTGGCTGC---CCACATTGGTTGAAGATTTTTTTTCTATTTTAACTGAAGAATACGCACTATTTTAGTAAAGAAAAAAAGATGCAGAAACACCCTCTACTT-AGATTCCCCAACCAAGCCTTGT-----------CAGGGTCTTCTGGGCATTCTTGACACA-GCCTAGAAGAATCCAAGAAGGCGCACTCGGACTGCCCAAACCCAGAGATGGGGAT----GCCAGGCAGAGGCCCTCCCCAGC------------AAAACACACAT------------------------AC-AGACA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73863139 235 - 130959383 CTGAG--GAGGTGGGTGGCTGCCTTCCACATTGGTTGAAGA-CTTTTTTCTATTTTAACCAGAGAATACGCACTACTTTAGTAAAG-AAAAAAGATGCAAAAACACCCTCTACTT-AGATTCCCCAACCAAGCCTTGT-----------CAGGTTCTCCTGGGCTTTCTTGACACA-GCCTAGAAGAA---------------------TGCCCAAACCCAGAGACGGGGAT----GCCAGGCAGAGGCCCTCCCCAGC------------AAAACACACAT------------------------AC-GGACA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75424416 235 - 133195287 CTGAG--GAGGTGGGTGGCTGCCTTCCACATTGGTTGAAGA-CTTTTTTCTATTTTAACCAGAGAATACGCACTACTTTAGTAAAG-AAAAAAGATGCAAAAACACCCTCTACTT-AGATTCCCCAACCAAGCCTTGT-----------CAGGTTCTCCTGGGCTTTCTTGACACA-GCCTAGAAGAA---------------------TGCCCAAACCCAGAGACGGGGAT----GCCAGGCAGAGGCCCTCCCCAGC------------AAAACACACAT------------------------AC-GGACA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73288574 235 - 125196307 CTGAG--GAGGTGGGTGGCTGCCTTCCACATTGGTTGaaga-cttttttctattttaaccaGAGAATACGCACtattttagtaaag-aaaaaagatgcaaaaacaCCCTCTACTT-AGATTCCCCAACCAAGCCTTGT-----------CAGGGTCTCCTGGGCTTTCTTGACACA-GCCTAGAAGAA---------------------TGCCCAAACCCAGAGACAGGGAT----GCCAGGCAGAGGCCCTCCCCAGC------------AAAACACACAT------------------------AC-GGACA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72121309 234 - 125710982 CTGAG--GAGGTGGGTGGCTGCCTTCCACATTGGTTGAAGA-CTTTTTTCTATTTTAACCAAAGAATACGCACTATTTTAGTAAAG-AAAAAAGATGCAAAAACACCCTCTACTT-AGATTCCCCAATCAAGCCTTGT-----------CAGGGTCTCCTGGGCTTTC-TGACACA-GCCTAGAAGAA---------------------TGCCCAAACCCAGAGATGGGGAT----GCCAGGCCGAGGCCCTCCCCAGC------------AAAACGCACAT------------------------AC-GGACA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75579901 291 - 121768101 CTGAG--GAGGTGGGCAGGTGCCTTCGACACTGGTTGAATA--CTTTTTCTATATTAACTGAAGAGTATGCACCATTTTAGTAAAG-AAAAAAGATGTGGAAACACCCTCTACTTAAGATTCCCCCACCAAGCCTTGTCAGTCTCTGTCCAGGGTCTCCTGGGCATTCTTGATACA-GCCTAGAAGAATCTAAGAAGGTGCACTCCGACTGCCCAAACCTGGAGATGGGGAT----GCCCAGCTGAGGCTCTCCCCAGC------------AAAacacacatacacacacacacacacacacacacac-agaca i calJac3.chr12 C 0 C 0 s mm10.chr14 24185341 234 + 124902244 CTGGG--G-----------CGACTTCATCGCTGGCTTTTGG-AATGTTCTTCTTTTAACCAAGGACTGTGTGCTGTTTCAGTAAAGGAAGAATGGTACAAAAAC-CCCTGGAGTT-TGCTTTTCAAACC--------------------TAGGAGCTCCTCAGCATGCCTGCTACACCCCCAGAAGAGTCTAAGATGACCCAT------TTCCC--ACCAAGGAAATGAAACAAGGGCCAGCCTCAGCCCCTCCCCCAC------------AGTTCACACAC------------------------ACAGGACA i mm10.chr14 C 0 C 0 s canFam3.chr4 27739354 260 + 88276631 CTGAG--GTGG-GGGTGGGTGA---CTTTACTGTTTGCAGGATTTTTTTCTTTTTTAACTAAAGAACATGCATCACAGTAGTAAAG-AAAGAAGAT----------CCTCTATGT-TGCTCCCCTAACCAAGGCTTGGCAGTGTCTGCCCAGGCTCTCCTGGGCATTTCAGAAGCA-ACCGAGAAAAATCC-AGACGGCACATTCTGAGGG-----GCCTGGAGATGGAGCT----GCCAGGCTGCGAGCCTCCCCCACCACAAATGCATGCAAACACACTT------------------------AT-GCACA i canFam3.chr4 I 304 I 42 a score=80124.000000 s hg38.chr10_KI270825v1_alt 87796 23 + 188315 AAACACCTGTGTGCTGCTCTCA----------------A s panTro4.chr10 76465725 23 + 133524379 AAACACCTGTGTGCTGCTCTCA----------------A i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76128738 23 - 133410057 AAACACCTGTGTGCTGCTCTCA----------------A i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35070276 23 + 104879549 AAACACCTGTGTGCTGCTCTCA----------------A i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73863374 23 - 130959383 AAACACCTGTTTGCTGCTCTCA----------------A i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75424651 23 - 133195287 AAACACCTGTTTGCTGCTCTCA----------------A i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73288809 23 - 125196307 AAACACCTGTTTGCTGCTCTCA----------------A i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72121543 23 - 125710982 AAACACCTGTCTGCTGCTCTCA----------------A i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75580192 23 - 121768101 AAACACCTGTCTGCTGCTCTCA----------------A i calJac3.chr12 C 0 C 0 s mm10.chr14 24185575 39 + 124902244 AAGCACCTGTCTGCAGCTCTCAGGGGACAGGGGCCCAGG i mm10.chr14 C 0 C 0 e canFam3.chr4 27739614 42 + 88276631 I a score=1943155.000000 s hg38.chr10_KI270825v1_alt 87819 528 + 188315 CCATGGCGCCCCCTC-CCCT---AGGGCTGCCTCATTTCCTCTGAGATAAATCATGCAGAGGGCCGGGAAGCCCCACAAATCCCTCAAGCAAACACTCAAGTCAAACAGCACCATTTACCCTGCAAGGG---CCTCTTCAAGTTTACAAGGCGTGGGAGGAACCCGGCAACAAAACTGCCCTTGTCCAGAGAGGTTGACCTTTGCCCTTGGGCCCAGCGGGGAGCAAGCCTGTGGCCATCCCCTTATCCCC-GCTTCCTCTGCTGCTGGCCTACTGCCACCTGAGCATCCCACAGCCAGGCAT---CCACTCCACGCCTGATGAAGGCAAGGGGGCCCAGGATGCCAGGACGCGGGGCTGGTCGCCCAGCAGCTCTGAGATGC------TCCCAGCCCTGCTCCCTGTGGCAGCCAGGCCTCTTCTCCTGGTGGGGTCTGGAGGTGGTGTTTGCTGAGAGGCACTGGTCCAGCTGAACTGACCTGGGGGACCCCAATGACCAGGATGCATCCCCACCCCCGC---CCCTGCTGCCAAGGACCACAACG s panTro4.chr10 76465748 528 + 133524379 CCATGGCGCCCCCTC-CCCT---AGGGCTGCCTCATTTCCTCTGAGATAAATCATGCAGAGGGCCGGGAAGCCCCACAAATCCCTCAAGCAAACATGCAAGTCAAACAGCACCATTTACCCTGCAAGGG---CCTCTTCAAGTTTACAAGGCGTGGGAGGAACCCGGCAACAAAACTGCCCTTGTCCAGAGAGGTTGACCTTTGCCCTTGGGCCCAGCGGGGAGCAAGCCTGTGGCCATCCCCTTATCCCC-GCTTCCTCTGCTGCTGGCCTACTGCCACCTGAGCATCCCACAGCCAGGCAT---CCACCCCACGCCTGATGAAGGCAAGGGGGCCCAGGATGCCAGGACGCGGGGCTGGTCGCCCAGCAGCTCTGAGATGC------TCCCAGCCCTGCTCCCTGTGGCAGCCAGGCCTCTTCTCCTGGTGGGGTCTGGAGGTGGCGTTTGCTGAGAGGCACTGGTCCAGCTGAACTGACCTGGGGGACCCCAATGACCAGGATGCATCCCCACCCCCGC---CCCTGCTGCCAAGGACCACAACG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76128761 526 - 133410057 CCACGGCGCCCCCT--CCCG---AGGGCTGCCTCATTTCCTCTGAGATAAATCATGCAGAGGGCCGGGAAGCCCCACAAATCCCTCAAGCAAACACGCAAGTCAAACAGCACCATTTACCCTGCAAGGG---CCTCTTCAAGTTTACAAGGTGTGGGAGGAACCCGGCAACAAAACTGCCCTTGTCCAGAGAGGTTGACCTTTGCCCTCGGGCCCAGCGGGGAGCAAGCCTGTGGCCATCCCCGTAT-CCC-GCTTCCTCTGCTGCTGGCCTGCTGCCACCTGGGCATCCCACAGCCAGGCAT---CCACCCCACGACTGATGAAGGCAAGGGGGCCTGGGATGCCAGGATGCGGGGCTGGCCGCCCAGCAGCTCTGAAATGC------TCCCAGCCCTGCTCCCTGAGGCAGCCAGGCCTCTTCTCCTGGTGGGGTCTGGAGGTGGCGTTTGCTGAAAGGCACTGGTCCAGCTGAACTGACCTGGGGGACCCCAATGACTAGGATGCATCCCCACCCCCGC---CCCTGCTGCCAAGGACCACAGCG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35070299 527 + 104879549 CCACGGCGCCCCTC--CCCC---AGGGCTGCCTCATTTCCTCTGAGATAAATCATGCAGAGGGCCAGGAAGCCCCACAAATCCCTCAAGCAAACATGCAAGTCAAACAGCACCATTTACCCTGCAAGGG---CCTCTTCAAGTTTACAAGGCGTGGGAGGAACCCGGCAACAAAACTGCCCTTGTCCAGAGAGGTTGACCCTTGCCCTTGGGCCCAGCGGGGAACAAGCCTGTGGCCATCCCCATATCCCC-GCTTCCTCTGCTGCTGGCCTACTGCCACCTGGGCATCCCACAGCCAGGCAT---CCACCCCACGCCTGACGAAGGCAAGAGGGCCCAGGATGCCGGGATGCAGGGCTGGCCGCCCAGCAGCTCTGAGATGC------TCCCAGCCCTGCTCCCTGTGGCAGCCAGGCCTCTTCTCCTGGTGGGGTCTGGAGGTGGTGTTTGCTGAGAGGCACTGGTCCAGCTGAACTGACCTGGGGGACCCCAATGACCAGGATGCATCCCTACCCCCGC---CCCTGCTGCCAAGGACCACAGAG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73863397 512 - 130959383 CCACGGCGCCCCCTC-CCCC---AGGG-TGCCTCATTTCCTCTGAGATAAATCATGCAGAGGGCCGGGAAGCCCCACAAATCCCTCAAGCAAACACGCAAGTCAAACAGCACCATTTACCCTGCAAGGG---CCTCTTCAAGTTTACAAGGCGTGGGAGGAACCCGGCAACAAAAATGCCCTTGTCCAGCAAGGTCGACCTTTGCCCTCGGGCCCAGCGGGGAGCAAGCCTGTGGCCATCCCCATGTCCTC-GCTTCCTCTGCTGCTGGCCTACTGCCACCTG---------------GGCAT---CCACCCTACGCCTGACGAAGGCAAGAGGGCCCGGGATGCCGGGATAGGGGGCTGGCCGCCCAGCAGCTCTGAGATGC------TCCCAGCCCTGCTCCCTGTGGCAGCCAGGCCTCTTCTCCTGGTGGGGTCTGGAGGTGGTGTTTGCTGGGAGGCACTGGTCCAGCTGAACTGACCTGGGGGACCCCAATGACCAGGATGCATCCCCACCCCCAC---CCCTGCTGCCAAGGACCACAGCG i rheMac3.chr9 C 0 I 195 s macFas5.chr9 75424674 512 - 133195287 CCACGGCGCCCCCTC-CCCC---AGGG-TGCCTCATTTCCTCTGAGATAAATCATGCAGAGGGCCGGGAAGCCCCACAAATCCCTCAAGCAAACACGCAAGTCAAACAGCACCATTTACCCTGCAAGGG---CCTCTTCAAGTTTACAAGGCGTGGGAGGAACCCGGCAACAAAAATGCCCTTGTCCAGCAAGGTCGACCTTTGCCCTCGGGCCCAGCGGGGAGCAAGCCTGTGGCCATCCCCATGTCCTC-GCTTCCTCTGCTGCTGGCCTACTGCCACCTG---------------GGCAT---CCACCCTACGCCTGACGAAGGCAAGAGGGCCCGGGATGCCGGGATAGGGGGCTGGCCGCCCAGCAGCTCTGAGATGC------TCCCAGCCCTGCTCCCTGTGGCAGCCAGGCCTCTTCTCCTGGTGGGGTCTGGAGGTGGTGTTTGCTGGGAGGCACTGGTCCAGCTGAACTGACCTGGGGGACCCCAATGACCAGGATGCATCCCCACCCCCAC---CCCTGCTGCCAAGGACCACAGCG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73288832 513 - 125196307 CCACGGCGCCCCCTC-CCCC--AAGGG-TGCCTCATTTCCTCTGAGATAAATCATGCAGAGGGCCGGGAAGCCCCACAAATCCCTCAAGCAAACACGCAAGTCAAACAGCACCATTTACCCTGCAAGGG---CCTCTTCAAGTTTACAAGGCGTGGGAGGAACCCGGCAACAAAACTGCCCTTGTACAGCAAGGTCGACCTTTGCCCTCGGGCCCAGCGGGGAGCAAGCCTGTGGCCATCCCCGTGTCCTC-GCTTCCTCTGCTGCTGGCCTACTGCCACCTG---------------GGCAT---CCACCCCACGCCTGACGAAGGCAAGAGGGCCCGGGATGCCGGGATAGGGGGCTGGCCGCCCAGCAGCTCTGAGATGC------TCCCAGCCCTGCTCCCTGTGGCAGCCAGGCCTCTTCTCCTGGTGGGGTCTGGAGGTGGTGTTTGCTGGGAGGCACTGGTCTAGCTGAACTGACCTGGGGGACCCCAATGACCAGGATgcattcccacccccac---ccctgctgccAAGGACCACAGCG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72121566 513 - 125710982 CCACGGCGCCCCCTC-CCCC---AGGGCTGCCTCATTTCCTCTGAGATAAATCATGCAGAGGGCCGGGAAGCCCCACAAATCCCTCAAGCAAACACGCAAGTCAAACAGCACCATTTACCCTGCAAGGG---CCTCTTCAAGTTTACAAGGCGTGGGAGGAACCCGGCAACAAAACTGCCCTTGTCCAGCGAGGTCGACCTTTGCCCTCGGGCCCAGCGGGGAGCAAGCCTGTGGCCATCCCCGTGTCCTC-GCTTCCTCTGCTGCTGGCCTACTGCCACCTG---------------GGCAT---CCACCCCGCGCCTGACGAAGGCAAGAGGGCCCGGAATGCCGGGATAGGGGGCTGGCCACCCAGCAGCTCTGAGATGC------TCCCAGCCCTGCTCCCTGTGGCAGCCAGGCCTCTTCTCCTGGTGGGGTCTGGAGGTGGTGTTTGCTGAGAGGCACTGGTCCAGCTGAACTGACCTGGGGGACCCCAATGACCAGGATGCATCCCCACCCCCAA---CCCTGCTGCCAAGGACCACAGCG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75580215 498 - 121768101 CCACGGAGCCCCCTC-CCCC---AGGGCTGCCTCATTTCCTCCAAGATAAATCATGCAGAGGGCTGGGAAGCCCCACAAATCCCTCAAGCAAGCACAAAAGTCAAACAGCACCATTTACCCTGCAAGGG---CCTCTTCAAGTTTACAAGGCACGGGAGGAACCTGGCAACAAAACTGCCCTTGTCCAGTGAGGTCAACCTTTGCCCTCGGGCCCAGCAGGGAGCACGCCTGTGGCCATCCCCATGTCTCC-ACTTCCTCTGCTGGTGGCCTGCTGCCACCTGGGCATCCCACAGCCTGGCAT---CCACCCCACACC------------------------TGCTGGGATGTGGGGCTGCCC------CAGTTCTGAGATGC------TCCCAGCCCTGCTCCCCATGGCAGCCAGGCCTCTTCTCCTGGTGGGGTATGGAGGTGGTGCTTGTTTAGAGGCACTCATCCAGCTGAACTGACCTGGGGGACCCCAGTGACCAGGATGCATCCCCACCCCTGA---CCCTGTTGCCAAGGATCACAGCA i calJac3.chr12 C 0 C 0 s mm10.chr14 24185614 480 + 124902244 CCCAGGCCCACCCTT-CTCACTGGGGGTGGCCTCATTTCCTCTGAGATAAGTCATACACAGGACGGGAAGGCCCCACAAATCCCTCCTGCAAACATGCAAGTCAAACAGCCCCATTTACCCTGCAAGGGCCTCCTCTTCAGGTTTACACGGCGTGGGAGGAACCTGGCAACAAAGCTCGCCTTGTCCAGGGAGCCTGACCCTCACCTTTAGG-TCAGTGGGGAGCAAGCCTGTGGCCATCCCACATCACCT-GCTCTCTCTGGAGGAGCCTCCCCACTTCCTGGTT------------AGTGT---C--------------TGAAGGTGAGA-----------ACAAGGA-------------GCCCAGCAGCTCATA---GC------CTCCACCACCTCTCCTTCTGGCAGCCTAACCTTCTCTTTTGTTGGGGTCCCAGGCTGGTACTTGCTGAAA-ACAC-AGTCTAATCAACCCGACCTGGGAGTATCCA-TGACCAGGACCAAGTACAACACACACAAGCCTGGCCACCAAAGGTCACAGCT i mm10.chr14 C 0 I 4 s canFam3.chr4 27739656 470 + 88276631 CTGTGGCGCCCCTCCAGGCT---AGGGCTGCCTCATTTCCTCAGAGATAAATGATGCGGAGGGCTGTGGAGCCCCACAAATCTCTCAAGCAAACACGCAAGTCAAACAGCACCATTTACCCCGCAAGGG---CCTCTCCAAGTTAACAAGGCATGGGAGGAGCCAGGCAACAAAACCAGCCTTGTCCAGCGAGGTCAACCTTTGCCCTGGGGCCCCGTGGGGAGGAAACCTGTGGCCACCCCCATGTCCCCTGCTTCCTCTCCTGCTGAC------CCACCCA---------------GGAATGAGCTTCCCACAGCCCGGTGGTGGC------------------------------------CCTGGCAGCTCAGAGGTGCACCTTTACCCACCCCCAC-CCCCGCAGCGGCCA-GCCTCCTGTCCTCATGTGGTCCTAAGGTGGCACTTGCCAAGGGACACGGGTCCAGCTGAAGAGAACTGGAGAACCTCATTGGCCA----------CCGTTAACAA---ACTAGCCTCCAAGGGTCACAGCT i canFam3.chr4 I 42 C 0 a score=368837.000000 s hg38.chr10_KI270825v1_alt 88347 121 + 188315 GTAGGAAA----AGGAGAGCAGGGAATGGGCTGCAAG-GTGGGGGAAGAAG------A----CCCT---------------------------------------CC-------CCTGTGAGGCAGACAGGAAAGGGAGAGGGGGACA-----GGGGTGGGAGGGAGACCTCAGTCTGAATGTCTGT- s panTro4.chr10 76466276 121 + 133524379 GTAGGAAA----AGGAGAGCAGGGAATGGGCTGCAAG-GTGGGGGAAGAAG------A----CCCT---------------------------------------CC-------CCTGTGAGGCAGACAGGAAAGGGAGAGGGGGACA-----GGGGTGGGAGGGAGACCTCAGTCTGAATGTCTGT- i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76129287 121 - 133410057 GTAGGAAA----AGGAGAGCAGGAAATGGGCTGCAGG-GTGGGGGAAGAAG------A----CCCT---------------------------------------CC-------CCTGTGAGGCAGACAGGAAAGGGAGAGGGGGACG-----GGGGTGGGAGGGACGCCTCAGTCTGAATGTCTGT- i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35070826 121 + 104879549 GTAGGAAA----AAGAGAGCAGGGAATGGGCTGCAGG-GTGGGGGAGGAAG------A----CCCT---------------------------------------CC-------CCTGTGAGACAGACAGGAAAGGGAGAGGGGGACG-----GGGGTGGGAGGGACGCCTCAGTCTGAATGTCTGT- i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73864104 159 - 130959383 GTAGGAAA----AGGAGAGCAGGGAATGGGCTGCGGG-GTTCGAGAGGAAG------A----CCCTAGGAGAGCAGGGAATGGGCTGCGGGGTTGGAGAGGAAGACC-------CCTGTTAGGCAGACAGGAAAGGGAGA-GAGGATG-----AGGGTGGGAGGGACGTCTCAGTCTGAATGTCTGT- i rheMac3.chr9 I 195 C 0 s macFas5.chr9 75425186 120 - 133195287 GTAGGAAA----AGGAGAGCAGGGAATGGGCTGCGGG-GTTGGAGAGGAAG------A----CCCT---------------------------------------CC-------CCTGTTAGGCAGACAGGAAAGGGAGA-GAGGATG-----AGGGTGGGAGGGACGTCTCAGTCTGAATGTCTGT- i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73289345 120 - 125196307 GTAGGAAA----AGGAGAGCAGGGAATGGGCTGCGGG-GTTGGAGAGGAAG------A----CCCT---------------------------------------CC-------CCTGTTAGGCAGACAGGAAAGGGaga-ggggatg-----ggggtgggagggacgTCTCAGTCTGAATGTCTGT- i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72122079 118 - 125710982 GTAGGAAA----AGGAGAGCAGGGAATGGGCTGCGGG-GTTGGAGAGGAAG------A----CCCT------------------------------------------------CCCGTTAGGCAGATAGGAAAGGGAGA-GGGGATG-----GGGGTGGGAGGGACATCTCAGTCTGAATGTCTGT- i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75580713 127 - 121768101 CTAGGAAA----AAGAGAGCAGGGAATGGACTGCGAG-GTGGGGGAGGAAG------A----CCCT--------------------------------------TCC-------CCTGTGGGGCAGACAGGAAAGGGAGAGGGGGACGGGGACGGGGTGGGAGCAACGCCTCAGTCTGAAGGTCTGT- i calJac3.chr12 C 0 C 0 s mm10.chr14 24186098 124 + 124902244 CAAAATAA----AAGGAAGTAAATAATG--CCACAGGAGTGGAGGAAGAAG------AAAGGCCTT---------------------------------------CCCATGACACATGTGGGGTGAGCAGGGAAGGGAGGAGAGAGAA-----CAGGTGAA---GACGT----GTCTGAATGTGTGt- i mm10.chr14 I 4 I 795 s canFam3.chr4 27740126 133 + 88276631 GTAGGAAAGGACAGGAGAACGAGGCACGAGGCACGGG-CTGGAGGGGAGGGCGAGTCA----CCTT---------------------------------------CCCATGTCATCTGTGGGGAGAACAGGAAAA------GGGGGGG-----GAGGGGAGAGAGCAATCTCAGTCCGGATGTTTGTT i canFam3.chr4 C 0 C 0 a score=268264.000000 s hg38.chr10_KI270825v1_alt 88468 81 + 188315 AAAGCTGAGCAGGTGCTCAAGAAAGTCAGAGAAC-GGGAGACAAGGAAACTTTACGCTTCTTGAGGGCAGAGTGCTCCTTCT s panTro4.chr10 76466397 81 + 133524379 AAAGCTGAGCAGGTGCTCAAGAAAGTCAGAGAAT-GGGAGACAAGTAAACTTTACGCTTCTTGAGGGCAGAGTGCTCTTTCT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76129408 77 - 133410057 AAAACTGAGCAGGTGCTCAAGAAAGTCAGAGAAT-GGGAGACAAGGAAACTTTACGCTTCTTGAGGGCAGAGTGC----TCT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35070947 81 + 104879549 AAAGCTGAGCAGGTGCTCAAGAAAGTCAGAGAAT-GGGAGGCAAGGAAACTTTACGCTTCTTGAGGGCAGAGTGCTCTTTCT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73864263 81 - 130959383 AAAGCTGAGCAGGTGCTCAAGAAAGTCAGAGAAC-AGGAGACAAGGAAACTTTACGGTTCTTGAGGGCAGAGTGCTCTTCCt i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75425306 81 - 133195287 AAAGCTGAGCAGGTGCTCAAGAAAGTCAGAGAAC-AGGAGACAAGGAAACTTTACGGTTCTTGAGGGCGGAGTGCTCTTCCT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73289465 81 - 125196307 AAAGCTGAGCAGGTGCTCAAGAAAGTCAGAGAAA-AGGAGACAAGGAAACTTTACGGTTCTTGAGGGCAGAGCGCTCttcct i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72122197 81 - 125710982 AAAGCTGAGCAGGTGCTCAAGAAAGTCAGAGAAC-AGGAGACAAGGAAACTTTACGCTTCTTGAGGGCAGAGTGCTCTTCCT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75580840 79 - 121768101 AAAGCTGAGTAGGTGCTCAAGAAAGTCAGAGAAC-GGGAGACAAGGAAAC--TACGCTTCGTGAGGGCAGAGTGCTCTTTCt i calJac3.chr12 C 0 C 0 s canFam3.chr4 27740259 75 + 88276631 CGAGCTGTGAAAGTCCTCAGTAAAG--AGAGAACTGGGAGCCCATGAAACTTTACGCCTCATGAGGGCAGA-----CTTTCT i canFam3.chr4 C 0 C 0 e mm10.chr14 24186222 795 + 124902244 I a score=450127.000000 s hg38.chr10_KI270825v1_alt 88549 154 + 188315 AAAAAAATAATATTTTCAATTAAACAatttcttgtagagatag------tctatgttgcccaggctgatcttggactcctggaatcaagggatcctcctgctccttccaaagtgctgggattacaggtgtgagccactgtacccagACTGGATTTCTCTA s panTro4.chr10 76466478 154 + 133524379 AAAAAAATAATATTTTCAATTAAACAatttcttgtagagatag------tctatgttgcccaagctgatcttggactcctggaatcaagggatcctcctgctccttccaaagtgctgggattacaggtgtgagccactgtacccagccTGGATTTCTCTA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76129485 158 - 133410057 AAAAAAACAATTTTTTCAATTAAACAatttcttgtagagatag--tctctctatgttgcccaggctgatcttggactcctggaatcaagggatcctcctgctccttccaaagtgctgggattacaggtgtgagccactgtacccagcCTGGATTTCTCTA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35071028 153 + 104879549 -AAAAAACAATTTTTTCAATTAAACAatttcttgtagagatag------tctatgttgcccaggctgatcttggactcctggaatcaagggatcctcctgctccttctaaagtgctgggattacaggcgtgagccactgtacccagccTGGATTTCTCTT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73864344 159 - 130959383 -aaaaaataatttttttaattaaaCAATGttttgtacagatagagtctctctatgttgcccaggctgatcttggactcctcgacccaagggatcctcctggtctttccaaagtgctgggattacaggcgtgagccactgtacccagccTGGATTTCTCTA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75425387 159 - 133195287 -AAAAAATAATTTTTTTAATTAAACAATGttttgtacagatagagtctctctatgttgcccaggctgatcttggactcctcgacccaagggatcctcctggtctttccaaagtgctgggattacaggcgtgagccactgtacccagccTGGATTTCTCTA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73289546 159 - 125196307 -aaaaaataatttttttaattaaacaatgtTTTGTACAGatagagtctctctatgttgcccaggctgatcttggactcctcgacccaagggatcctcctgctctttccaaagtgctgggattacaggcgtgagccactgtacccagcctggatTTCTCTA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72122278 159 - 125710982 -AAAAAATAATTGTTTTAATTAAACAatgttttgtacagatagagtctctctatgttgcccaggctgatcttggactcctcgacccaagggatcctcttgctctttccaaagtgctgggattacaggcgtgagccactgtacccagccTGGATTTCTCTA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75580919 156 - 121768101 -aaaaaataatttttttaattaaaCAattttttgtagagataagag---tctgtgtcacccaggctggtgttggacatctggactcaagggatcctcctgctccttccaaagtgctgggattacaggcgtgagcctctgtactcagccCAGATTTCTCTT i calJac3.chr12 C 0 C 0 e canFam3.chr4 27740334 0 + 88276631 C e mm10.chr14 24186222 795 + 124902244 I a score=3526020.000000 s hg38.chr10_KI270825v1_alt 88703 1128 + 188315 TTTATGACAAGGTG-AAATTCTGAGTC---TTTTTTTTTCCTCTCtgagttataatttacataccacacaaagtatgcaat-----------tcagt--gttt---aatatattcacaaggttatgaatcc--acaaagttgtgcagccactaccactatctaattccagaacatttttatcac---cccaaaaagaaaccaatacccatcagcagtca--------------------------------------------------------------------------------------------------cttcccaaaccccaagcccaagacagccacaaatctgctttgtgtctacatagatttccctgttgtggacattt-catgtacctggaatc--atagttt------------------------------------gtggtcttt--ttgctggtttctttcattggctgtcatgtttttgaagttcatccacactatagcatggatcagtactgcattccttgttatgctgaata---atattccattgtatgga-tagatcacattttatttatccattcatcggtcagtagacctttgggttgttaccg-gttttgg-----gctgctatgaatattcacacctcaagtttctgtgtggacgtatattttcagttctcctgg----acacctaggagtgtcgctgggaggtcacctgttagc--tctgttt-----agttttttgaggaatcactaggctgcctttcacagtggctgtatca--tttattcccaccaacaac---atatgcaggtcc---caatttctacacatcctGGATGAGGCAGATTTAAACCCAGACTTGACAGGATTAGAATAATATCATTAACGACCACA-ACACTGACTGAGCGCCTCATACACACGGGCACGCGGCGCCAGTGCCTTCTACGCAGTGT--------CT-------TCATGACAGCCATACAGACCAATTCTCCTACACTG--AGATGTGCCAACCTCGTGCTTTCTAGCAAGGCTGTGGGGCTTCCCTTGGACCGAGGTGGAGCCACATACACCTCTGAAATGATGATTCTCTCAAGGAAGTATAGAATCCAAACTAAACCCCAAGGCAAAAGGTTACCTGAGCCAAGCGTAGACCAAGAAGAACAAACTGCCGGCAGGCAAAACAGCAAGAAAACAAAGCACACAGCAGGGTGTAGGTAAAGGCCGGGAGAGGCCGCCTGCCCTCAGGTGGGGGAAGTTAC--CACGCACCCCAGGGCAGAGAAGGGGCTCAAACCCTTAG--AGGGCCATCCC s panTro4.chr10 76466632 1131 + 133524379 TTTATGACAAGGTG-AAATTCTGAGTC---TTTTTTTTTCCTCTCtgagttataatttacataccacacaaagtgtgcaat-----------tcagt--gttt---aatatattcacaaggttatgaatcc--acaaagttgtgcagccactaccactatctaattccagaacatttttatcac---cccaaaaagaaaccaatacccatcagcagtca--------------------------------------------------------------------------------------------------cttcccaaaccccaagcccaagacagccacaaatctgctttgtgtctacatagatttccctgttgtggacattt-catgtacctggaatc--atagttt------------------------------------gtggtcttt--ttgctggtttctttcattggctgtcatgtttttgaagttcatccacactatagcatggatcagtactgcattccttgttatgctgaata---atattccattgtatgga-tagatcacattttatttatccattcatcggtcagtagacctttgggttgttaccg-gttttgg-----gctgctatgaatattcacacctcaagtttctgtgtggacgtatattttcagttctcctgggtgcacacctaggagtgtcgctgggaggtcacctgttagc--tctgttt-----agttttttgaggaatcactaggctgcctttcacagtggctgtatca--tttattcccacccacaac---gtatgcaggtcc---caatttctacacatcctGGATGAGGCAGATTTAAACCCAGACTTGACAGGATTAGAATAATATCATTAACGACCACA-ACACTGACTGAGTGCCTCATACACACGGGCACGCGGCGC-AGTGCCTTCTACGCAGTGT--------CT-------TCATGACAGCCATACAGACCAATTCTCCTACACTG--AGATGTGCCAACCTCGCGCTTTCTAGCAAGGCTGTGGGGCTTCCCTTGGACCGAGGTGGAGCCACATACACCTCTGAAATGATGACTCTCTCAAGGAAGTACAGAATCCAAACTAAACCCCAAGGCAAAAGGTTACCTGAGCCAAGCGTAGACCAAGAAGAACAAACTGCCGGCAGGCAAAACAGCAAGAAAACAAAGCACACAGCAGGGTGCAGGTGAAGGCCGGGAGAGGCCGCCTGCCCTCAGGTGGGGGAAGTTAC--CACGCACCCCAGGGCAGAGAAGGGGCTCAAACCCTTAG--AGGGCCATCCC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76129643 1132 - 133410057 TTTATGACAAGGTG-AAATTCTGAGTC--TTTTTTTTTTCCTCTCtgagttataatttacataccacactaagtgtgcaat-----------tcagt--gttt---aatatattcacaaggttatgaatcc--acaaagttgtgcagccactaccactatctaattccagaccatttttatcac---cctaaaaagaaaccaatacccatcagcagtca--------------------------------------------------------------------------------------------------cttcccaaaccccaagcccaagacagccacaaatctgctttgtgtccacatagatttccctgttgtggacattt-catgtacctggaatc--atagttt------------------------------------gtggtcttttgtggctggtttctttcattggctgtcatgtttttgaagttcatccacactatagcatggatcagtactgcattccttgttatgctgaata---atattccattgtatgga-tagatcacattttatttatccattcatcagtcagtagacctttgggttgttatcg-gttttgg-----gctgctatgaatattcacacctcaagtttctgtgtggacgtatattttcagttctcctgggtgcacacctaggagtgtcgctgggaggtcacctgttagc--tctgttt-----agttttttgaggaatcactaggctgcctttcacagtggctgtatca--tttattcccacccacaat---gtatgctggtcc---caatttct--acatcctGGATGAGGCAGATTTAAACCCAGATTTGACAGGATTAGAATAATATCATTAACGACCACA-ACACTGACTGAGCGCCTCATACACACGGGCACGCAGCGCCAGTGCCTTCTACGCAGTGT--------CT-------TCATGACAGCCATACAGGCCAATTCTGCTACACTG--AGATGTGCCAACCTCATGCTTTCTAGCAAGGCTGTGGGGCTTCCCTTGGACTGAGGTGGAGCCACATACACCTCTGAAATGATGACTCTCTCAAGGAAGTATAGAATCCAAACTAAAACCCAAGGCAAAAGGTTACCTG-GCCAAGTGTAGACCAAGAAGAACAAACTGCCGGCAGGCAAAACAGCAAGAAAACAAAGCACACAGCAGGGCACAGGTGAAGGCCGGGAGAGGCCGCCTGCCCTCAGGTGGGGGAAGTTAC--CACGCACCCCAGGGCAGAGAAGGGGCTCAAACCCTTAG--AGGGCCATCCC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35071181 1142 + 104879549 TTTATGACAAGGTG-AAATTCTGAGTCTTTTTTTTTTTTCCTCTCtgagttataatttacataccacataaagtgtgcaat-----------tcagt--gttt---aatatattcacaagggtatgaatcc--acaaagttgtgcagccactaccactatccaattccagaacatttttatcac---cccaaaaacaaaccagtacccatcagcagtca--------------------------------------------------------------------------------------------------cttcccaaaccccaagcccaagacaaccacaaatctgctttgtgtctacatagatttccctgttgtggacattt-cttgtacctggaatc--atagttt------------------------------------gcggtcttttgtggctggtttctttcattggctgtcatgtttttgaagttcatccacattatagcatggatcagtactgcattccttgttatgctgaata---atattccattgaatgga-tagatcacattttatttatccattcatcagtcagtggacctttgggttgttactg-gtttggg-----gctgctatgaatattcacacctcaagtttctgtgtggatgtatattttcagttctcctgggtgcacacctaggagtgtcgctgggaggtcacctgttagc--tctgtttgaaacagttttttgaggaatcactcggctgcctttcacagtggctgtatca--tttattcccacccacaat---gtatgcaggttc---caatttctacacatcctGGATGAGGCAGATTTAAACCCAGACTTGACAGGATTAGAATAATATCATTAACGACCACA-ACACTGACTGAGCGCCTCATACACACGGGCATGCGGCGCCAGTGCCTTCCAGGCAGTGT--------CT-------TCATGACAGCCATATAGGCCAATTCTGCTGCACTG--AGATGTGCCAACCTCACACTTTCTAGCAAGGCTGTGGGGCTTCCCTTGGACCGAGGTGGAGCCACATACACCTCTGAAATGATGACTATCTCAAGGAAGTATAGAATCCAAACTAAACCCCAAGGCAAAAGGTTACCTCAGCCAAGTGTAGACCAAGAAGAACAAACTGCCAGCAGGCAAAACAGCAAGAAAACAAAGCACACGGCAGGGTGCAGGGGAAGGCCGGGAGGGGCCGCCTGCCCTCAGGTGGGGGAAGTTAC--CACGCGCCCCAGGGCAGATAAGGGGCTCGAACCCTTAG--AGGGCCATCCC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73864503 1162 - 130959383 CTTATGACAAGGTG-AACTTCTGAGTC--TTTTTTTTTTCCTCTCtgagttataatttacataccacacaaagtgtacaat-----------tca----gttt---aatatattcacgaggttatgaatcc--acaaagttgtgaagccactaccactatctaattccagaacatttttatcac---ccccaaaataaaccagtacccatcagcagtca--------------------------------------------------------------------------------------------------cttcccaaaccccaagcccaagacaaccacaaatctgctttgtgtccacatagattttcctgttgtggacattt-catgtacctggaatc--atagtttgtggtcttttgtggctggtttctttcactggctgccgtggtcttttgtggctggtttctttcattggctgtcatgtttttgaagttcattcacattatagcatggatcagtattgcattccttgttatgctgaata---atattccattgtatgga-tagatcacattttatttatccattcatcagtcagtggacctttgg---gttaccg-gttttgg-----gctgctatgaatattcacacctcaagtttctgtgcggacatatattttcagttctcctgggtgcacacctacgcgtgtcgctgggaggtcagctgttagc--tctgttt-----agttttttgagggatcactaggctgcctttcacagtggctgtatca--tttcttcccacccacaat---gtatgcaggttc---caatttctacacatcctGGATGAGGCAGATTTAAACCCAGACTTGACAGGATTAGAACAGTATCATTAATGACCACA-ACACTGACTGAGCGCCTCATACACACGGGCACACGGCGCCAGCGCCTTCCACGCAGTGT--------CT-------TCGTGACAGTCATATAAGACAATTCTGCTACACTG--AGATGCTCCAACCTCACACTTTCTAGCAAGGCTGTGGGGCTTCCCGTGGACCGAGGTGGAGTCATATACACTTCTGAAATGATGACTCTCTCAAGGAAGAATAGAATCCAAACTAAACCCCAAGGCAAAAGGTTACCTGAGCCAAGTGTAGACCAAGAAGAACAAACTGCT----GGCAAAAGAGCAAGAAAACAAAGCACACAGCAGGGTGCAGGTGAAGGCTGGGAGGGGCCGCCTGCCCACAGGTCGGGGAAGTTAC--CACACACCCCAGGGCAGAGAAGGGGCTCGAACCCTTAG--AGGCCCATCCC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75425546 1126 - 133195287 CTTATGACAAGGTG-AACTTCTGAGTC--TTTTTTTTTTCCTCTCtgagttataatttacataccacacaaagtgtacaat-----------tca----gttt---aatatattcacgaggttatgaatcc--acaaagttgtgaagccactaccactatctaattccagaacatttttatcac---ccccaaaataaaccagtacccatcagcagtca--------------------------------------------------------------------------------------------------cttcccaaaccccaagcccaagacaaccacaaatctgctttgtgtccacatagattttcctgttgtggacattt-catgtacctggaatc--atagttt------------------------------------gtggtcttttgtggctggtttctttcattggctgtcatgtttttgaagttcattcacattatagcatggatcagtattgcattccttgttatgctgaata---atattccattgtatgga-tagatcacattttatttatccattcatcagtcagtggacctttgg---gttaccg-gttttgg-----gctgctatgaatattcacacctcaagtttctgtgcggacatatattttcagttctcctgggtgcacacctacgcgtgtcgctgggaggtcagctgttagc--tctgttt-----agttttttgaggaatcactaggctgcctttcacagtggctgtatca--tttcttcccacccacaat---gtatgcaggttc---caatttctacacatcctGGATGAGGCAGATTTAAACCCAGACTTGACAGGATTAGAACAGTATCATTAATGACCACA-ACACTGACTGAGCGCCTCATACACACGGGCACACGGCGCCAGCGCCTTCCACGCAGTGT--------CT-------TCGTGACAGTCATATAAGACAATTCTGCTACACTG--AGATGCTCCAACCTCACACTTTCTAGCAAGGCTGTGGGGCTTCCCGTGGACCGAGGTGGAGTCATATACACTTCTGAAATGATGACTCTCTCAAGGAAGAATAGAATCCAAACTAAACCCCAAGGCAAAAGGTTACCTGAGCCAAGTGTAGACCAAGAAGAACAAACTGCT----GGCAAAAGAGCAAGAAAACAAAGCACACAGCAGGGTGCAGGTGAAGGCTGGGAGGGGCCGCCTGCCCACAGGTCGGGGAAGTTAC--CACACACCCCAGGGCAGAGAAGGGGCTCGAACCCTTAG--AGGCCCATCCC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73289705 1129 - 125196307 CTTATGACAAGGTG-Aacttctgagtc--ttttttttttcctctctgagttataatttacataccacacaaagtgtacaat-----------tca----gttt---AATATATTCACGAGGTTATGAATCC--ACAAAGTTGTGAAGCCACtatcactatctaattccagaacatttttatcac---ccccaaaATAAACCAGTACCCATCAGCAGTCA--------------------------------------------------------------------------------------------------CTTCCCAAACCCCAAGCCCAAGACAACCACAAATCTGCTTTGTGTCCACATAGATTTCCCTGTTGTGGACATTT-CATGTACCTGGAATC--ATAGTTT------------------------------------GTGGTCTTTTGTGGCTGGTTTCTTTCATTGGCTGTCatgtttttgaagttcatccaCATTATAGCATGGATCAGTATTGCATTCCTTGttatgctgaata---atattccattgtatgga-tagatcacattttatttatccattcatcagtcagTGGACCTTTGGGTTGTTACCG-GTTTTgg-----gctgctatgaatattcacacctcaagtttctgtgtggacatatattttcagttCTCCTGGGTGCACACCTAGGCGTGTCGCTGGGAGGTCAGATGTTAGC--tctgttt-----agttttttgaggaatcactagGCTGCCTTTCACAGTGGCTATATCA--TTTCTTCCCACCCACAAT---GTATGCAGGTTC---TAATTTCTACACATCCTGGATGAGACAGATTTAAACCTAGACTTGACAGGATTAGAACAATATCATTAATGACCACA-ACACTGACTGAGCGCCTCATACACATGGGCACACGGCGCCAGCACCTTCCACGCAGTGT--------CT-------TCGTGACAGTCATATAAGACAATTCTGCTACACTG--AGATGCTCCAACCTCACACTTTCTAGCAAGGCTGTGGGGCTTCCTATGGACCGAGGTGGAGTCATATACACTTTTGAAATGATGACTCTCTCAAGGAAGAATAGAATCCAAACTAAACCCCAAGGCAAAAGGTTACCTGAGCCAAGTGTAGACCAAGAAAAGCAAACTGCt----ggcaaaagagcaagaaaacaaaGCACACAGCAGGGTGCAGGTGAAGGCTGGGAGGGGCCGCCTGCCCACAGGTGGGGGAAGTTAC--CACACACCCCAGGGCAGAGAAGGGGCTCGAACCCTTAG--AGGCCCATCCC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72122437 1129 - 125710982 CTTATGACAAGGTG-AAATTCTGAGTC--TTTTTTTTTTCCTCTCtgagttataatttacataccacacaaagtgtacaat-----------tca----gttt---aatatattcacgaggttatgaatcc--acaaagttgtgaagccactaccactatctaattccagaacatttttatcac---ccccaaaataaaccagtacccatcagcagtca--------------------------------------------------------------------------------------------------cttcccaaaccccaagcccaagacaaccaccaatctgctttgtgtccacatagatttccctgttgtggacattt-catgtacctggaatc--acagttt------------------------------------gtggtcttttgtggctggtttctttcactggctgtcatgtttttgaagttcatccacattatagcatggatcagtattgcattccttgttatgctgaata---atattccattgtatgga-tagatcacattttatttatccattcatcagtcagtggacctttgggttgttaccg-gttttgg-----gctgctatgaatattcacacctcaagtttctgtgtggacatatattttcagttctcctgggtgcacacctaggcgtgtcgctgggaggtcacctgttagc--tctgttt-----agttttttgaggaatcactaggctgcctttcacagtggctgtatca--tttcttcccacccacaat---gtatgcaggttc---taatttctacacatcctGGATGAGGCAGATTTAAACCCAGACTTGACAGGATTAGAACAATATCATTAATGACCATA-ACACTGACTGAGCGCCTCATACACACGGGCACACAGCGCCAGTGCCTTCCACACAGTGT--------CT-------TCGTGACAGTCATATAAGACAATTCTGCTACACTG--AGATGCTCCAACCTCACACTTTCTAGCAAGGCTGTGGGGCTTCCCGTGGACCGAGGTGGAGTCATATACACTTCTGAAATGATGACTCTCTCAAGGAAGAATAGAATCCAAACTAAACCCCAAGGCAAAAGGTTACCTGAGCCAAGTGTAGAACAAGAAGAACAAACTGCT----GGCAAAAGAGCAAGAAAACAAAGCACACAGCAGGGTGCAGGTGAAGGCTGGGAGGGGCCGCCTGCCCACAGGTGGGGGAAGTTAC--CACACACCCCAGGGCAGAGAAGGGGCTAGAACCCTTAG--AGGCCCATCCC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75581075 1123 - 121768101 TTTATGACAAGGTGAAAAATCGGAGTC----TTTTTTTTTCCCCCtgagttataatttacataccacacaaagtgtgcaat-----------tcagt-ggtttttaaatatattcacaaggttatgaatcc--acagagtcgtgcagccgtcaccactatctaattccagaacatttttatcac---------------------cccatcatcagtca--------------------------------------------------------------------------------------------------cttcccaaacgcccagcccaggacaaccacaaatctgctttgtgtctatacagatgtccctgctgt-gctaatt-cacgtaactggaatc--acagttt------------------------------------gtggtcttttgcggctggtttccttcatttgctgtcatgttttttaagttcatccatattatagcatggatcggtcctgcattctttgttatgctgaata---atattccatcatatgga-gagaccacgttttatttatctattcatcagtcggtggacctttgggt-gttacca-gcttggg-----gctgctatgaatattcacaccccaagtttctgtgtggacatagattttcaattcccttgggtgcacacctaagagagtcactgggaggtcaactgttagc--catgctt-----agttttttgaggaatcactaggctgcctttcacagtagctgtatca--tttattcccacccacaat---gtatgcaggttc---caatttttacacatcctGGATGAGGCAGATTTTAACCCAGACTTGACAGGGCTGGAATAACATCAATCATGACCACA-ACAGGGACCAAGCACCTCACACACA--GGCACGTGATGTCAGTGCCTTCCACGCAGTGT--------CTTTCAGCCTCATGACAGCCATA-GAGCCAGTTCTGCTACACTG--AGAAGCACCAACCTCACACCTTCTAGCAAGGCTGTGGGGCTTCCCTTGGACTGCCATGGAGCCACATACACATCTGAAATGATGACTCTCTCAAGGAAGAACAGAATCCAAACTAAACCCCGAGGCAAAAGGTTCCTTGAGCCAAGTGTAGATCAAAAAGAGAAAACTGCCAACAGGCAAAAGTACAAGAAAACAAAGCACAAAGCAGGGTGCAGCTGAA-GCCAGGAGGGGTAGCCTGCCCTCAGGTGGGGTAGGTCACTGCAAGCACCTCAGGGCAGAGAAGGGGCTCCAACTCTTAG--AGGGCTGTCCC i calJac3.chr12 C 0 C 0 s canFam3.chr4 27740334 1201 + 88276631 TTGATGAAAAGGTG-GTAATTGGAGTT--------------TTTCTGAGATAGAAGTCACGCACTGTACGATTCACCCAATCAAGGCCCCAGTCAGTGGAGCC---GGCACACTTACCAGGCTGTAAATCCTGGTAAGGTTGTGCGGTAACCACCACTACGTAATCGCGGCACATTGTCATCCCCAGCCCTCAAGGACACCCGTGCCCATCAGCACTCCCCCTCCCTCCAGAATAAACAGGATtttgtttattattatttattattttgtttattatttattatttgtttatttattattattttgtttattATTatcccccccacccctctgccccaaacaacc-cctgtctctctcctgtctctgtggaatcccctgttccggaagtttccatacaaatgcaatcagacaccgt------------------------------------gtggtcctttgtgactggcttct---atttagcaccaggttttccaggttaatccagatagcggcaagtgtcaatgcgtcacctgtttttatgctgaatgttcatattccgccatttagagcagaccaca-----------------------gctggacc--------gtttccatgttctgaatgctgctgctatg-acactgacactacagctgtttctgtggatgtgtgtttgcaattctcttgggactacacctcgacgtgcaattgccgggtcatctgggaactgtatgttt-----acctgtctgtggaactgccaaaccg-atcgcagagtggctgccccaccttccaccccacccccagcagggcatgggggctatggcaaccactccacatccCTAGGAGGGCAGATTATAGCCCAGCCTTGAGAGGCCTAGGACAAAAGCAAGAAGGACAGCAGACACTTATGGAGTTCTTCACACTGGTGGGCACACGGTGCCACTGCTTTATATGCAACATCATCTAACCT-------CCAGGGCGACATAAGAGACCATGACTGCTACCCTGAAAAAAGTCCCACTCTGCCACTTTCTGGCAAGGCCATGGAACTTTCTTTAGGCTGAGACGGAGCCAGGAATACATCTGAAATGAGAAATCACTCAAAGAA-AATAAAATCCAAGCTAAA-TCCAAGTCAAAAGG----CTGAGCCAAATTTGGA-CAGGGGGA--AAAATGCCCATAAATAAAGGAGCAAGGA----------ACTGGTGGGTAAAGGTAAAGACAGGGAGGTGTGGCCAGC------------------AC--TCCCGGCCCCAGGGCAGAGAAGGCACACAAACACTCAGCTGGGGCTATCCC i canFam3.chr4 C 0 I 2580 e mm10.chr14 24186222 795 + 124902244 I a score=853274.000000 s hg38.chr10_KI270825v1_alt 89831 283 + 188315 CTCGGGCAGCTTCCTGGGAGCTTTGTTTTGACACAGCACCGCCATCCTTACCTGCTTCACACGCAAGATTCCTCCACAGGATTTCTTTTGAGGTTAAAAATATTTTTGCCTCTTTAGAAACTGAAAACCTACAGTCTTTAAATCTG-TTTGCTCCAGGAAGCTCCACTGACATGCACAAGGAAGGGTCCCTGCAGGGGGAATGGGTTGTGGGCAGTACTGACCAGAGCTAGCACGGCACTTTCTACTCTCTCATTTCATCCTTAGAGAAATGCTCCAAGAGCAC s panTro4.chr10 76467763 283 + 133524379 CTCGGGCAGCTTCCTGGGAGCTTTGTTTCGACACAGCACCGCCATCCTTACCTGCTTCACACGCAAGATTCCTCCAAAGGATTTCTTTTGAGGTTAAAAATATTTTTGCCTCTTTAGAAACTGAAAACCTACAGTCTTTAAATCTG-TTTGCTCCAGGAAGCTCCACTGACATGCACAAGGAAGGGTCCCTGCAGGGGGAATGGGTTGTGGGCAGTACTGACCAGAGCTAGCACGGCACTTTCTACTCTCTCATTTCATCCTTAGAGAAATGCTCCAAGAGCAC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76130775 283 - 133410057 CTCGGGCAGCTTCCTGGGAGCTTTGTTTCGACACAGCACCGCCATCCTTACCTGCTTCACACGCAAGATTCCTCCAAAGGATTTCTTTTGAGGTTAAAAATATTTTTGCCTCTTTAGAAACTGAAAACCTACAGTCTTTAAATCTG-TTTGCTCTAGGAAGCTCCACTGACATGCACAAGGAAGGGTCCCTGCAGGGGGAATGGGTTGTGGGCAGTACTGACCAGAACTAGCACGGTACTTTCTACTCTCTCATTTCATCCTTAGAGAAATTCTCCAAGAGCAC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35072323 283 + 104879549 CTCGGGCAGCTTCCTGGGAGCTTTGTTTCGAAACAGTACCGCCATCCTTACCTGCTTCACATGCAAGATGCCTCCAAAGGATTTCTTCTGAGGTTAAAAATATTTTTGCCTCTTTAGAAACTGAAAACCTACAGTCTTTAAATCTG-TTTGCTCTACGAAGCTCCACTGACATGCACAAGGAACGGTCCCTGCAGGGGGAATGGGTTGTGGGCAGTACTGACCAGAGCTAGCACGGCACTTTCTACTCTCTCATTTCATCCTTAGAGAAATGCTCTAAGAGGAC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73865665 279 - 130959383 CTCGGGCAGCTTCCCGGGAGCTTTGTTTCGACACAGCACCGCCATCCTTACCTGCTTCACACGCAAGATT--TCCAAAGGATTTCTTTTGAGGTTAAAAATATTTTTGCCTTTTTAGAAACTGAAAACCTACAGTCTTTAAATCTG-TTTGCTCTAGGAAGCTCCACTGACATGCACAAGGAAGGGTCCCTGCAGGGGGAACGGGTTGTGGGCAGTACTAACCAGAGCTAGCAAGGCACCTTCTA--CTCTCATTTCATCCTTAGAGAAATGCTCCAAGAGCAC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75426672 281 - 133195287 CTCGGGCAGCTTCCCGGGAGCTTTGTTTCGACACAGCACCGCCATCCTTACCTGCTTCACACGCAAGATTTCTCCAAAGGATTTCTTTTGAGGTTAAAAATATTTTTGCCTTTTTAGAAACTGAAAACCTACAGTCTTTAAATCTG-TTTGCTCTAGGAAGCTCCACTGACATGCACAAGGAAGGGTCCCTGCAGGGGGAACGGGTTGTGGGCAGTACTAACCAGAGCTAGCAAGGCACCTTCTA--CTCTCATTTCATCCTTAGAGAAATGCTCCAAGAGCAC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73290834 281 - 125196307 CTCGGGCAGCTTCCCAGGAGCTTTGTTTCGACACAGCACTGCCATCCTTACCTGCTTCACACGCAAGATTTCTCCAAAGGATTTCTTTTgaggttaaaaatatttttgcctttttagaaaCTGAAAACCTACAGTCTTTAAATCTG-TTTGCTCTAGGAAGCTCCACTGACATGCACAAGGAAGGGTCCCTGCAGGGGGAACGGGTTGTGGGCAGTACTAACCAGAGCTAGCAAGGCACCTTCTA--CTCTCATTTCATCCTTAGAGAAATGCTCCAAGAgcac i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72123566 281 - 125710982 CTCGGGCAGCTTCCCGGGAGCTTTGTTTCGACACAGCACCACCATCCTTACCTGCTTCACACTCAAGATTTCTCCAAAGGATTTCTTTTGAGGTTAAAAATATTTTTGCCTTTTTAGAAACTGAAAACCTACAGTCTTTAAATCTG-TTTGCTCTAGGAAGCTCCACTGACATGCACAAGGAAGGGTCCCTGCAGGGGGAACGGGCTGTGGGCAGTACTAACCAGAGCTAGCAAGGCACCTTCTA--CTCTCATTTCATCTTTAGAGAAATGCTCCAAGAGCAC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75582198 271 - 121768101 CTCAGGCAGCTTCCCAGGAGCTTTGTTTCACCACAGC------------ACCTGCTTCACAGGCAGGATTCCGCCAAAGGATTTCTTTTGAGGTTAAAAATATTTTTGCCTCCTTAGAAACGGAAAACCTGCAGTCTTTAAATCTGTTTTTCTCCAGGAAGCTTCACTGACTTGTACAAGGAAGCATCCCCACAGGGGGAATGGGTTGTGGGCAGTACTGACCAGTGCAAGCACGGCACTTTCTCCTCTCTCATTTCATCCTTAGAGAAATG-TCCAAGAGCAC i calJac3.chr12 C 0 C 0 e canFam3.chr4 27741535 2580 + 88276631 I e mm10.chr14 24186222 795 + 124902244 I a score=988034.000000 s hg38.chr10_KI270825v1_alt 90114 345 + 188315 CACCCCCACCTCCTGAATCTATAAAGG---GTGGGAAGCATG--TTGTCACAGCTTCTCTGTGCCATGCAGCAGGTGCGAGAAGGGA-----CAGTCTTCCTGCTGCC-----GGCTTTCCATTACC-----------------------AAGGCTCAGTCAAGACCTATGGGCTAAATACCAACTTTTGCCCCAGCCACTGGGCCTGACCTCACACGACCAATTCCCCTAATCAGA---GGGCACATAAAAAATACTTCTAATAGCTCCAAG--------TATATCCATCTTAGGGTCTCTTGCTGAGCCTGCCCTGGTTACTCCACATAAAACCTCAATCAATATCGGAGAAAGGAAAATAAACAGCAACTTTTTCAACAGAAGCAAGTTTT s panTro4.chr10 76468046 345 + 133524379 CACCCCCACCTCCTGAATCTATAAAGG---GTGGGAAGCGTG--TTGTCACAGCTTCTCTGTGCCATGCAGCAGGTGCGAGAAGGGA-----CAGTCTTCCTGCTGCC-----GGCTTTCCATTACC-----------------------AAGGCTCAGTCAAGACCTATGGGCTAAATACCAACCTTTGCCCCAGCCACTGGGCCTGACCTCACACGACCAATTCCCCTAATCAGA---GGGCACACAAAAAATACTTCTAATAGCTCCAAG--------TATATCCATCTTAGGGTCTCTTGCTGAGCCTGCCCTGGTTACTCCACATAAAACCTCAATCAATATCGGAGAAAGGAAAATAAACAGCAACTTTTTCAACAGAAGCAAGTTTT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76131058 339 - 133410057 CACCCCCACCTC------CTATAAAGG---GTGGGAAGGGTG--TTGTTGCAGCTTCTCTGAGCCATGCAGCAGGTGCGAGAAGGGA-----CAGTCTTCCTGCTGCC-----GGCTTTCCATTACC-----------------------AAGGCTCGGTCAAGACCTACGGGCTAAATACCAACCTCTGCCCCAGCCACTGGGCCTGACCTCACACAACCAATTCCCCTAATGAGA---GGGCACACAAAAAATACCTCTAATAGCTCCAAG--------TATATCCATCTTAGGGTCTCTTGCTGAGCCTGCCCTGGTTACTCCACATGAAACCTCAATCAATATCGGAGAAAGGAAAATAAACAGCAAGTTTTTCAACAGAAGCAAGTTTT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35072606 345 + 104879549 CACCCCCACCTCCTGAACCTATAAAGT---GTGGGAAGGGTG--TTGTCGCAGCTTCTCTGAGCCATGCAGCAGGTGCGAGAAGGGA-----CAGCCTTCCTGCTGCC-----GGCTTTCCATTACC-----------------------AAGGCTCAGTCAAGACCTATGGGCTAAATACCAACCTCTGCCCCAGTCACTGGGCCTGACCTCACACAACCGATTCCCCTAATCAGA---GGGCACACAAAAAATACCTCTAATAGCTCCAAG--------TATATCCATCTTAGGGTCCCTTGCTGAGCCTGCCCTGGTTACTCCACATAAAACCTCAGTCAATATCGGAGAAAGGAAAATAAACAGCAAGTTTTTCAACAGAAGCAAGTTTT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73865944 333 - 130959383 CACCCCCACCTCCTGAACCTATAAAGG---GTGGAAAGGGTG--CCGTCGCAGCTTCTCTGAGCCATGCAGCAGGTGCGAGAA-GGA-----CAATCTTCCTGTTGCC-----GGCTTTCCATTACC-----------------------AAGGCTCAGTCAAGACCTATGGGCTAAACACCAACCTCTGCCCCAGCC----------ACCTCACACAACCAATTCCCCTAATCAGA---GGGCACACAAAAAATAC-TCTAATAGCTCCAAG--------TATATCCATCTTAGGGTCCCTTGCTGAGCCTGCCCTGGTTACTCCACATAAAACCTCAATCAATACCGGAGAAAAGAAAATTAACAGCAAGTTTTTCAAGAGAAGCAAGTTTT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75426953 333 - 133195287 CACCCCCACCTCCTGAACCTATAAAGG---GTGGAAAGGGTG--CCGTCGCAGCTTCTCTGAGCCATGCAGCAGGTGCGAGAA-GGA-----CAATCTTCCTGTTGCC-----GGCTTTCCATTACC-----------------------AAGGCTCAGTCAAGACCTATGGGCTAAACACCAACCTCTGCCCCAGCC----------ACCTCACACAACCAATTCCCCTAATCAGA---GGGCACACAAAAAATAC-TCTAATAGCTCCAAG--------TATATCCATCTTAGGGTCCCTTGCTGAGCCTGCCCTGGTTACTCCACATAAAATCTCAATCAATACCGGAGAAAAGAAAATTAACAGCAAGTTTTTCAAGAGAAGCAAGTTTT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73291115 333 - 125196307 cacccccacctcctgaACCTATAAAGG---GTGGAAAGGGTG--CCGTCGCAGCTTCTCTGAGCCATGCAGCAGGTGCAAGAA-GGA-----CAATCTTCCTGTTGCC-----GGCTTTCCATTACC-----------------------AAGGCTCAGTCAAGACCTATGGGCTAAACACCAACCTCTGCCCCAGCC----------ACCTTACACAACCAATTCCCCTAATCAGA---GGGCACACAAAAAATAC-TCTAATAGCTCCAAG--------TATATCCATCTTAGGGTCCCTTGCTGAGCCTGCCCTGGTTACTCCACATAAAACCTCAATCAATAccggagaaaagaaaataaacagcaagtgTTTCAAGAGAAGCAAGTTTT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72123847 333 - 125710982 CACCCCCACCTCCTGAACCTATAAAGG---GTGGAAAGGGTG--CCGTTGCAGCTTCTCTGAGCCATGCAGCAGGTGTGAGAA-GGA-----CAATCTTCCTGTTGCC-----AGCTTTCCATTACC-----------------------AAGGCTCAGTCAAGACCTATGGGCTAAACACCAACCTCTGCCCCAGCC----------ACCTCACACAACCAATTCCCCTAATCAGA---GGGCACACAAAAAATAC-TCTAATAGCTCCAAG--------TATATCCATCTTAGGGTCCCTTGCTGAGCCTGCCCTGGTTACTCCACATAAAACCTCAATCAATACCGGAGAAAAGAAAATAAACAGCAAGTTTTTCAAGAGAAGCAAGTTTT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75582469 339 - 121768101 CACCCCCACCTCCTGAATCTATAAAGT---GTGGGAAGGGTA--TTGCCCCAGCTTCTCTGGGTCAAGCAGCAGGTGCGAGGAAGCAGTCTTCCTTCTTCCTGCTGCC-----AGCTTTCCATTACC-----------------------AAGGCTCTGTCAAGACCTATGGGCTAAATACCAACCTCTGCACCAGCCATTGGACCTGACCTCACACAACCAATTCCCGGAATCAGAGGGGGGCACCAAAAAGATCTCTATAATAGCTCCAAG--------TATAGCCATCTTAGAGTCCCTTGCTGAGCCTGCAT-------------TAAGACCTCAATCAGTATCAGAGAAA-GAAAATAAACAGCAAGTTTTTCAACAGAAGCaagtttt i calJac3.chr12 C 0 C 0 s mm10.chr14 24187017 341 + 124902244 cacatatacCTCCTGAACCCAGAAGGGCCAAGGAAAAGCCTGGTTTGCTACAGCCCCTT----CTCTACATCAGGGG-GAGGTGGTG-----GGTCCTCCCTGCTGTCTACAAGGCTTTTATTTCCCCTTTCAGGAAACCATTTCGTCAGGAGGCTCACTGATG--CTACAGG--AAGTTACAACCTCTGCA-CAGCT---AAACTGTATCACACAAGA-------CCCTAAGGAGG--CCGGCTCCAAGCAAGGCCTCCTGACAACTTCGATGCACATCCTAGCTCCCTCCTAGCTCCCTGCACTGAGCCTACCCTGGGTTCTCCACAGACAA--------------AGTGGATAGAAAATAA------------TCCATAGAAGCACATTTT i mm10.chr14 I 795 I 2914 e canFam3.chr4 27741535 2580 + 88276631 I a score=46175.000000 s hg38.chr10_KI270825v1_alt 90459 17 + 188315 TCAATGGAATACAGTTT s panTro4.chr10 76468391 17 + 133524379 TCAATGGAATACAGTTT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76131397 17 - 133410057 TCAATGCAATACGGTTT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35072951 17 + 104879549 TCAACGGAATACGGTTT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73866277 17 - 130959383 TCAATGGAATACAGTTT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75427286 17 - 133195287 TCAATGGAATACAGTTT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73291448 17 - 125196307 TCAATGGAATACAGTTT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72124180 17 - 125710982 TCAATGGAATACAGTTT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75582808 16 - 121768101 cc-atggaatatggttt i calJac3.chr12 C 0 I 1356 e canFam3.chr4 27741535 2580 + 88276631 I e mm10.chr14 24187358 2914 + 124902244 I a score=44372.000000 s hg38.chr10_KI270825v1_alt 90476 18 + 188315 CATTGGAATATGGAATAC s panTro4.chr10 76468408 18 + 133524379 CATTGGAATATGGAATAC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76131414 18 - 133410057 CACTGGAATATGGAATAC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35072968 18 + 104879549 CATTGGAATATGGAATAC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73866294 18 - 130959383 CATTGGAATATGGAATAT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75427303 18 - 133195287 CATTGGAATATGGAATAT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73291465 18 - 125196307 CATTGGAATATGGAATAT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72124197 18 - 125710982 CATTGGAATATGGAATAT i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27741535 2580 + 88276631 I e mm10.chr14 24187358 2914 + 124902244 I e calJac3.chr12 75582824 1356 - 121768101 I a score=1173506.000000 s hg38.chr10_KI270825v1_alt 90494 402 + 188315 TCCTTTTATCTAAACAATTAAACCTTAAAGCCATTAGGCAAAGCAGAGCAAGACAAGGACCTACACTAGGGCAGGTCGCCCCAGAGGGGATATCACAGCTGGCATGGAAAGAGGAGTGGGTCCTGGCATGGCATGAGGAGACCAGGCCTGACAGAGAGAAGGCATGGGGTGGAAGAGCCCACAAAGGGTCAGGAGGAGATGGGAACAGGATGGGGGACTGCAGAGGGCATGGGAGGCAGCTACACATGGGggattgaccaagtaaacaaattaagaataacaggaattggctgggtgtgatgactcacacctgtaatcccagcactttgggaggcca--aggtgggtggatcatgaggtcaggagatcgagaccatcctggacaacatg--gtgaaaccctctctc s panTro4.chr10 76468426 402 + 133524379 TCCTTTTATCTAAACAATTAAACCTTAAAGCCATTAGGCAAAGCAGAGCAAGACAAGGACCTACACTAGGGCAGGTCGCCCCAGAGGGGATATCACAGCTGGCATGGAAAGAGGAGTGGGTCCTGGCATGGCATGAGGAGACCAGGCCTGACAGAGAGAAGGCATGGGGTGGAAGAGCCCACAAAGGGTCAGGAGGAGATGGGAACGGGATGGGGGACTGCAGAGGGCATGGGAGGCAGCTACACATGGGggattgaccaagtaaacaaattaagaataacaggaattggctgggtgtgatggctcacacctgtaatcccagcactttgggaggcca--aggtgggtggatcatgaggtcaggagatcaagaccatcctggacaacatg--gtgaaaccctctctc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76131432 401 - 133410057 TCCTTTTATCTAAACAATTAAACTTTAAAGCCATTAGGCAAAGCAGAGCAAGACAAGGACTTACACTGGGGCAGGTCGCCCCAGAGGGAATATCACAGCTGGCATGGAATGAGGAGTGGGTCCTGGCATGGCATGAGGAGACCAGGCCTGACAGAGAGAAGGCATGGGGTGGAAGAGGCCACAAAGGGTCAGGAGGGGATGGGAATGGGATGGGGGACTGCAGAGGGCATGGGAGGCAGCTACACATGGGGGATTGACCAAGTAAACAAATTAAGAATAACAGGAATCggctgggtgtgatggctcacacctgtaatcccagcactttgggaggcca--aggt-ggtggatcatgaggtcaggagatcgagaccatcctgaccaacatg--gtgaaaccctgtctc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35072986 402 + 104879549 TCCTTTGATCTAAACAATTAAACCTTAAAGCCATTAGGCAAAGCAGAGCAAGACAAGGACCTACACTGAGGCAGGTCGCCCCAGAGGGGATATCATAGCTGGCATGGAATGAGGAGTGGGTCCTGGCATGGCATGAGGAGACCAGGCCTGACAGAGAGAAGACATGGGGTGGAAGAGCCCACAAAGGGTCAGGAGGGGATGGGAACGGGATGGGGGACTGCAGAGGGTATGGGAGGCAGCTACACATGGGGGATTGACCAAGTAAACAAATTAAGAATAACAGGAATCgactgggcatgatggctcacacctgtaatcctagcactttgggaggcca--aggtgggtggatcatgaggtcaggagatcgagaccatcctggccaacatg--gtgaaaccctgtctc i nomLeu3.chr18 C 0 M 100 s rheMac3.chr9 73866312 401 - 130959383 TCCTTTTTTCTAAACAATTAAACCTTAAAGCCATTAGGCAAAGTAGAGCAAGACAGGGACCTACACTGGGGCAGGTCACCCCAGAGGGGATATCACGGCTGGCATGGAATGAGGAGGGGGTCCTGGCATCACATGAGGAGACCAGGCCTAGCAGAGAGAAGGCATGGGGTGGGAGAGCCCACAAAGGGTCAGGAGGGGATGGGAACGGGATGGGGGACTGCAGAGGGCATGGGAGGCAGCTACACATGGGGGATTGACCAAGTAAACAAATTAAGAATAACAGGAATCggcagggcacagtggctcacgcctgcaatctcagcactttgggaggcca--acgtgggtggatcatgaggtcaggagatcaagaccatcctggccaacgtg--gtg-aaccccgtctc i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75427321 401 - 133195287 TCCTTTTTTCTAAACAATTAAACCTTAAAGCCATTAGGCAAAGTAGAGCAAGACAGGGACCTACACTGGGGCAGGTCACCCCAGAGGGGATATCACGGCTGGCATGGAATGAGGAGGGGGTCCTGGCATCACATGAGGAGACCAGGCCTAGCAGAGAGAAGGCATGGGGTGGGAGAGCCCACAAAGGGTCAGGAGGGGATGGGAACGGGATGGGGGACTGCAGAGGGCATGGGAGGCAGCTACACATGGGGGATTGACCAAGTAAACAAATTAAGAATAACAGGAATCggcagggcacagtggctcacgcctgcaatctcagcactttgggaggcca--acgtgggtggatcatgaggtcaggagatcaagaccatcctggccaacgtg--gtg-aaccccgtctc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73291483 403 - 125196307 TCCTTTTTTCTAAACAATTAAACCTTAAAGCCATTAGGCAAAGTAGAGCAAGACAGGGACCTACACTGGGGCAGGTCGCCCCAGAGGGGATATCACAGCTGGCATGGAATGAGGAGGGGGTCCTGGCATCACATGAGGAGACCAGGCCTAGCAGAGAGAAGGCATGGGGTGGGAGAGCCCACAAAGGGACAGGAGGGGATGGGAACGGGATGGGGGACTGCAGAGGGCATGGGAGGCAGCTACACATGGGGGATTGACCAAGTAAACAAATTAAGAATAACAGGAAtcggcagggcacggtggctcacgcctgcaatcccagcactttgggatcccagcacgtgggtggatcatgaggtcaggagatcaagaccatcctggccaacgtg--gtg-aaccccgtctc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72124215 403 - 125710982 TCCTTTTTTCTAAACAATTAAACCTTAAAGCCATTAGGCAAAGTAGAGCAAGACAGGGACCTACACTGGGGCAGGTCACCCCAGAGGGGATATCACAGCTGGCACGGAATGAGGAGGGGGTCCTGGCATCACATGAGGAGACCAGGCCTAGCAGAGAGAAGGCATGGGGTGGGAGAGCCCACAAAGGGTCAGGAGGGGATGGGAACGGGATGGGGGACTGCAGAGGGCATGGGAGGCAGCTACACATGGGGGATTGACCAAGTAAACAAATTAAGAATAACAGGAATCggcagggcacggtggctcacgcctgcaatcccagcactttgggaggcca--acgtgggtggatcatgaggtcaggagatcaagaccatcctggccaacgtggtgtg-aaccccgtctc i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75584180 382 - 121768101 TCCTTTTTTCTGAACAATTAAGCCTTAAATCCATTAGGCAAGACAGAGCAAGACAGGGACCTACACTCTGGCAGTTCGCTCTAGAGGGGATATCACAGCTAGCACAGAATAAGGAGGAGGTGTTGGCATGGCAT-------------------AAGAGAAGGCATGGGGTGGGAGAACCCACAAAGGGTCTGG-GGAGATGCGAGTGGGAAGGAGGACTGCAGAGGGCATAGGAGGTGGCTACACAAGGTGGGCTGACCAAGTAAACAGACTAAGAATAACAGGAATCAgctgggcgtggcggctcacgcctgtaatcccagcactttgggaggctg--aagcaggtgtatcacgaggtcaggggatggggaccatactggccaacaca--gtgaaaccccaccta i calJac3.chr12 I 1356 C 0 e canFam3.chr4 27741535 2580 + 88276631 I e mm10.chr14 24187358 2914 + 124902244 I a score=282458.000000 s hg38.chr10_KI270825v1_alt 90896 121 + 188315 tactaaaaatacaaaaatcagccgggtatggtggcatgtgcctgtagtcccagctactaaggaggctgaggcaggagaatcacttgaacccaggacgcagaggttgcagtgagccaaaatc s panTro4.chr10 76468828 121 + 133524379 tactaaaaatacaaaaatcagccgggtatggtggcatgtgcctgtagtcccagctgctaaggaggctgaggcaggagaatcgcttgaacccaggacgcagaggttgcagtgagccaaaatc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76131833 121 - 133410057 tactaaaaatacaaaaattggccgggtatggtggcatgtgcctgtagtcccagctactaaggaggctgaggcaggagaatcgcttgaacccaggacacagaagttgcagtgagccaaaatc i ponAbe2.chr10 C 0 I 10 s rheMac3.chr9 73866713 121 - 130959383 tactaaaaacacaaaaattagctgggtgtggtggcgggcgcctgtagtcccagctactcaggagactgaggcagaagaatcgcttgaacccaggaggcagaggttgcagtgagccaaaatc i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75427722 121 - 133195287 tactaaaaacacaaaaattagctgggtgtggtggcgggcgcctgtagtcccagctactcaggagactgaggcagaagaatcgcttgaacccaggaggcagaggttgcagtgagccaaaatc i macFas5.chr9 C 0 M 780 s papAnu2.chr9 73291886 121 - 125196307 tactaaaaacacaaaaattagctgggtgtggtggcgggcgcctgtagtcccagctactcaggagactgaggcagaagaatcgcttgaacccaggaggcagaggttacagtgagccaaaatc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72124618 121 - 125710982 tactaaaaacacaaaaattagctgggtgtggtggcgggcgcctgtagtcccagctactcaggagattgaggcagaagaatcgcttgaacccaggaggcagaggttgcagtgagccaaaatc i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75584562 121 - 121768101 tactaaaaatacaataattagctgggtgtggtgacatgtgcctgtagtcccagctgctcagaaggctgaggcaggagaatcacctgaacccagaaggcggaggttgcagtgagctgagatc i calJac3.chr12 C 0 C 0 e canFam3.chr4 27741535 2580 + 88276631 I e mm10.chr14 24187358 2914 + 124902244 I e nomLeu3.chr18 35073388 100 + 104879549 M a score=86518.000000 s hg38.chr10_KI270825v1_alt 91017 90 + 188315 acactactgcactccagcctgggcgacagagcga-actctgtctcaaaa---aaaataaataaataaaataacaggaatcacatttgtcactgt s panTro4.chr10 76468949 87 + 133524379 acactactgcactccagcctgggcgacagagcga-actctgtctcaaaa---aaaataaataaataaaataacaggaatcacatttgtcac--- i panTro4.chr10 C 0 C 0 s rheMac3.chr9 73866834 94 - 130959383 ataccactgcactccagcctgggcgacacagcaagactccatctcaaaaacaaaaaaacaaaaacaaaaaCACAGGAATTACGTTTGTCACTGT i rheMac3.chr9 C 0 C 0 s papAnu2.chr9 73292007 93 - 125196307 ataccactgcactccagcctgggcgacagagcaagactccatctcaaaaac-aaaaaacaaaaacaaaagcacaggaATTACgtttgtcactgt i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72124739 94 - 125710982 ataccactgcactccagcctgggcgacagagcaagactccgtctcaaaaacaaaaaaacaaaaacaaaaaCACAGGAATTATGGTTGTCACtgt i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75584683 88 - 121768101 gcaccactgcactccagcctggccaacagtgcgagactccatctcaaaaaa-aaaataaaTgaata-----acaggaatcacgtttgtcactgc i calJac3.chr12 C 0 C 0 e canFam3.chr4 27741535 2580 + 88276631 I e mm10.chr14 24187358 2914 + 124902244 I e ponAbe2.chr10 76131954 10 - 133410057 I e nomLeu3.chr18 35073388 100 + 104879549 M e macFas5.chr9 75427843 780 - 133195287 M a score=66769.000000 s hg38.chr10_KI270825v1_alt 91107 91 + 188315 ttgtttg---tttgtttgtttg---------------------------------aggcagaatcttgctctgtcacccaggctggagtgcagtggcgcaatcttggctcaccgcatgctctgcctg s panTro4.chr10 76469036 90 + 133524379 -tgtttg---tttgtttgtttg---------------------------------aggcggagaatcgctctgtcacccaggctggagtgcagtggcgcaatcttggctcactgcatgctccgcctg i panTro4.chr10 C 0 C 0 s rheMac3.chr9 73866928 123 - 130959383 TTGTTTG----TTGTTTCATTGGAttttttttttttttttttttttttttttttgaggcagagtctcgctctgtcacccagactggaatgcagtggtgcaatcctggctcactgcatgctctgcttc i rheMac3.chr9 C 0 C 0 s papAnu2.chr9 73292100 126 - 125196307 ttgtttgttgtttgtttgattggatttttttttttttttttttttttttttgtt-aggcagagtctcgctctgtcacccagactggaatgcagtggtgcaatcctggctcactgcatgctctgcttc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72124833 115 - 125710982 ttgtttgttgtttgcttgattggattttttttttttttttttg------------aggcagagtctcgctctgtcacccagactggaatgcagtggtgcaatcctggctcactgcatgccctgcttc i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27741535 2580 + 88276631 I e mm10.chr14 24187358 2914 + 124902244 I e ponAbe2.chr10 76131954 10 - 133410057 I e nomLeu3.chr18 35073388 100 + 104879549 M e calJac3.chr12 75584771 0 - 121768101 C e macFas5.chr9 75427843 780 - 133195287 M a score=91978.000000 s hg38.chr10_KI270825v1_alt 91198 67 + 188315 ccgggttcacgccattctcctgcctcagcctcccaagtagctgggactacaggtgcccaccaccacg s panTro4.chr10 76469126 67 + 133524379 ccgggttcacgccattctcctgcctcagcctcccaagtagctgggactacaggtgcccaccactacg i panTro4.chr10 C 0 C 0 s rheMac3.chr9 73867051 67 - 130959383 ccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccatg i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75428623 67 - 133195287 ccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccatg i macFas5.chr9 M 780 C 0 s papAnu2.chr9 73292226 67 - 125196307 ccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccatg i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72124948 67 - 125710982 ccaggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccacg i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27741535 2580 + 88276631 I e mm10.chr14 24187358 2914 + 124902244 I e ponAbe2.chr10 76131954 10 - 133410057 I e nomLeu3.chr18 35073388 100 + 104879549 M e calJac3.chr12 75584771 0 - 121768101 C a score=245959.000000 s hg38.chr10_KI270825v1_alt 91265 147 + 188315 cccggctaattttttgta-tttttagtagagatggggtttcgccatgtta----ggatggtctcgatctcctgacctcgtgatctgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcacccagccttgtcactga s panTro4.chr10 76469193 147 + 133524379 cccggctaattttttgta-tttttagtagagatggggtttcgccatgtta----ggatggtctcgatctcctgacctcgtgatctgcctgcctcggcctcccaaagtgctgggactacaggcgtgagccaccgcacccggccttgtcactga i panTro4.chr10 C 0 C 0 s nomLeu3.chr18 35073490 145 + 104879549 cccgggtaa-ttttagta-tttctcgtagagacagggtttcaccatgtta-----gatggtctcgatctcctgacctcgtgatctgcctgcctcggcctcccaaagggctgggattacaggtgtgagctaccacgcccagccTTGTCACTGA i nomLeu3.chr18 M 100 C 0 s rheMac3.chr9 73867118 151 - 130959383 cccggctaattttttgta-tttttagtaaagaaggggtttcaccgtgttagtcaggatggtctcgatctcctgacctcatgttccgcccacttcagcctcccaaagggctgggattacaggtgtgagccgctgcacccggccTTGTCACTGA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75428690 151 - 133195287 cccggctaattttttgta-tttttagtagagaaggggtttcaccgtgttagtcaggatggtctcgatctcctgacctcatgttccgcccacttcagcctcccaaagggctgggattacaggtgtgagccgctgcacccggccTTGTCACTGA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73292293 152 - 125196307 cccggctaattttttgtgttttttagtagagaaggggtttcaccgtgttagtcaggatggtctcgatctcctgacctcatgatccgcccacttcggcctcccaaagtgctgggattacaggtgtgagccactgcacccggccttgtcactga i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72125015 152 - 125710982 cccggctaattttttgttttttttagtagagacggggtttcaccgtgttagtcaggatggtctcgatctcctgacctcatgatccgcccacgtcagcctcccaaagtgctgggattacaggtgtgagccactgcacccggccTTGTCACTGA i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27741535 2580 + 88276631 I e mm10.chr14 24187358 2914 + 124902244 I e ponAbe2.chr10 76131954 10 - 133410057 I e calJac3.chr12 75584771 0 - 121768101 C a score=53355.000000 s hg38.chr10_KI270825v1_alt 91412 23 + 188315 tgtttttaaaggaagttacaaaa s panTro4.chr10 76469340 23 + 133524379 tgtttttaaaggaagttacaaaa i panTro4.chr10 C 0 C 0 s nomLeu3.chr18 35073635 23 + 104879549 TGTTTTTAaaggaagttacaaaa i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73867269 23 - 130959383 TGTTTTTAaaggaagttacacaa i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75428841 23 - 133195287 TGTTTTTAaaggaagttacacaa i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73292445 23 - 125196307 tgtttttaaaggaagttaCACAA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72125167 23 - 125710982 TGTTTTTAaaggaagttacacaa i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75584771 23 - 121768101 tgtttttaaagcaggctacaaaa i calJac3.chr12 C 0 C 0 e canFam3.chr4 27741535 2580 + 88276631 I e mm10.chr14 24187358 2914 + 124902244 I e ponAbe2.chr10 76131954 10 - 133410057 I a score=1548881.000000 s hg38.chr10_KI270825v1_alt 91435 558 + 188315 ataaaagaggtggaaaccaaaatgaacctgtggtcttggattagaattgaaaatgtcaatgcgaactcatggctttcaatctacctgtctgatatagaaatacagatatacatatgtgtatgtatgtatgtatatgtgcctgtgtgtatgtgtacacttagctactccctacttctttccactaagagggccgggaaacagtgccaacccaagctacaagcacatccagcaattggttggctgtgtttttttta------tcagagacagcgtctcactccttcgcccaagctggggtgcagtggcatgatcatagctcactataacctcagattcctgggctccaatgatcctcctgcctcaacctcctgagtagctaggactacaggtgtgccaccatgtccagctaa-------ttttttt-------------------------------tttttttttgtagagatgggatcttgccatgttgcccaggctcatctcaagcaatc--------------------------------tctcaccttggtcttccaaagcgctgggatcacagatgtgagccaacgtgcccggcccagcatttacttctcaatactattctccattaaa s panTro4.chr10 76469363 557 + 133524379 ataaaagaggtggaaaccaaaatgaacctgtggtcttggattagaattgaaagtgtcaatgcgaactcatggctttcaatctacctgtctgatatagaaatacagatatacatatgtgtatgtatgtatgtatatgtgcctgtgtgtatgtgtacacttagctactccctacttctttccactaagagggccgagaaacagtgccaacccaagctacaagcacatccagcaattggttggctgtgtttttttca------tcagagacagtgtctcactccttcgcccaagctggggtgcagtggcatgatcatagctcactataacctcagattcctgggctccaatgatcctcctgcctcaacctcctgagtagctaggactacaggtgtgccaccatgtccagctaa--------tttttt-------------------------------tttttttttgtagagatgggatcttgccatgttgcccaggctcatctcaagcaatc--------------------------------tctcaccttggtcttccaaagcactgggatcacagatgtgagccaacgtgcccggcccagcatttacttctcaatactattctccattaaa i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76131964 541 - 133410057 ataaaagaggtggaaaccaaaatgaacctgtggtcttggattagaattgaaagtgtcagtgcgaactcatggctttccatctacatgtctgatatagaaatacagatatacatatgtgtatgtatgtatgtatatgtgcctgtgtgtatgtgtacacttagctactccctacttctttccactgagagggccgggaaacagtgctaacccaagctacaagcacatccagcaattggttggctgtgtttttttaa-------cagagacagcgtctcactccttcgcccaagctggggtgcagtggcatgatcatagctcactataacctcagattcctgggctccagtgat-------------cctcctgagtagctaggactacaggtgtgccaccacgtccagctaa----------tttt-------------------------------tttttttttgtagagatgggatcttgccatgttgcccaggctcatctcaagcaatc--------------------------------tctcaccttggtcttccaaagcgctgggatcacagatgtgagccaacgtgcccagcccagcatttacttctcaatactattctccattaaa i ponAbe2.chr10 I 10 C 0 s nomLeu3.chr18 35073658 563 + 104879549 ataaaagaagtggaaaccaaaatgaacctgtggtcttggattagaactgaaagtgtcaatgtgaactcatggctttcaatctacatgtctgatatagaaataaagatatatatatg--------tgtatgtatatgtgcctgtgtgtatgtgtacacttagctactcccgacttctttccactgagagggccgggaaacagtgctaactgaagctacaagcacatccagcacttggttggctgtttttttttttttttttttagagacagagtctcactccatcgtccaggctggggtgcagtggcgtgatcatagctcactataacctcagattcctgggctccaatgatcctcctgcctcaacctcctgagtagctaggactacaggtgtgccaccatgtccagctaatttttttttttttt-------------------------------tttttttttgtagagatggggtcttgccatgttgcccaggctcatctcaagcaatc--------------------------------tctcaccttggtcttccaaagcgctgggatcacagatgtgagccaacgtgcccggcccagcatttacttctcaatactattctccattaaa i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73867292 585 - 130959383 acaaaaagggtggaaaccacaatgaacctgtggtcttggattagaattgaaagtgtcaatgtgaactcatggctttcaatctacatgtctgatacagaaatacagatatacatatgtgtatgtatgtatgtgtatg-gcct-tgtgtacatgtacacttagctacttcctacttctttccactgagagggccgggaaacagtgctaacccaagctacaagcacatccagcacttggttggctgtgttttttttt-------tagagacagggtctcacgccatcgcccagactagggtacagtggcatgatcatagctcactataacctcagactcctaggttccaacgatcctcctgcctcaacctcctgagtagctaggactacaggtgcaccaccaggtgcagctaa--------tttttc--------------------------------ttttttttgtagagatggagtcttgccatgttgcccaggctcatctcaagcaatctctcatgttgcccaggctcatctcaagcaatgtctcactttggtctcccaaagcgctgagatcacagatatgggccaacgtgcctgacctggcatttacttctcaatattattctccattaaa i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75428864 553 - 133195287 acaaaaagggtggaaaccacaatgaacctgtggtcttggattagaattgaaagtgtcaatgtgaactcatggctttcaatctacatgtctgatacagaaatacagatatacatatgtgtatgtatgtatgtgtatg-gcct-tgtgtacatgtacacttagctacttcctacttctttccactgagagggccgggaaacagtgctaacccaagctacaagcacatccagcacttggttggctgtgttttttttt-------tagagacagggtctcactccatcgcccagactagggtacagtggcatgatcatagctcactataacctcagactcctaggttccaacgatcctcctgcctcaacctcctgagtagctaggactacaggtgcaccaccatgtgcagctaa--------tttttc--------------------------------ttttttttgtagagatggagtcttgccatgttgcccaggctcatctcaagcaatc--------------------------------tctcactttggtctcccaaagcgctgagatcacagatatgggccaacgtgcctgacctggcatttacttctcaatattattctccattaaa i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73292468 553 - 125196307 ACAAAAAGGGTGGAAACCACAATGAACCTGTGGTCTTGGATTAGAATTGAAAGTGTCAATGTGAACTCATGGCTTTCAATCTACATGTCTGATAGagaaatacagatatacatatgtgtatgtatgtatgtgtatg-gcct-tgtgcacatgtacacttAGCTACTTCCTACTTCTTTCCACTGAGAGGGCCGGGAAACAGTGCTAACCCAAGCTATAAGCACATCCAGCACTTGGTtgactgtg-tttttttt-------tagagacagggtctcactccatcgcccagactggggtacagtggcatgatcatagctcactataacctcagactcctaggctccaacgatcctcctgcctcaacctcctgagtagctaggactacaggtgcaccaccatgtgcagctaa--------tttttc-------------------------------tttttttttgtagagatggggtcttgccatgttgcccaggctcatctcaagcAATC--------------------------------TctcactttggtctcccaaagcgctgggatcacagatgtgggCCAACGTGCCTGACCTGGCATTTACTTCTCAATATTATTctccattaaa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72125190 550 - 125710982 acaaaaagggtggaaaccacaatgaacctgtggtcttggattagaattgaaagtgtcaatgtgaactcatggctttcaatctacatgtctgatacagaaatacagatatacatatgtgtatgtatgtatgtgtatg-gcct-ggtgtacatgtacacttagctacttcctacttctttccactgagagggccgggaaacagtgctaacccaagctacaagcacatccagcacttggttggctgtg--ttttttt-------tagagacagggtcttactccatcgcccagactggggtacagtagcatgatcatagctcactataacctcagactcctaggctccaatgatcctcctgcctcaacctcctgagtagctaggactacaggtgcaccaccatgtccagctaa--------tttttc---------------------------------tttttttgtagagatggggtcttgccatgttgcccaggctcatctcaagcaatc--------------------------------tctcactttggtctcccaaagcgctgggatcacagacgtgggccaacgtgcctgacctggcatttacttctcaatattattctccattaaa i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75584794 570 - 121768101 ataaaaagggtaaaaaccaaaatgaacctgtggtcttgaattagaattgaaactatcactgtaaactcatggctttcaatctacatgtctgatatagaaatacagatataaatataaatatgtgtgtttgt------gcctgtgtgtatgtgtacacttagctactctcta-tcctgtccactgagaggaccaggaaacagtgctaacccaagctacaagcacatccagcacatggt----tgtgttttttttt-------cagatacagggtctcactccactgcccaggctgggatgcagtggcatgatcatagctcagtgtaacctcagactcctgggcttcaacgatcctcccacctcaagctcctgagtagctaagactacaggtgtgccatcatgtccagctat--------ttgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcaagacagggtcttaccatgttgctcaggctcagctcaa--------------------------------------gttcaccttggtgtcccaaaacgctgggatcacagatgtgcgccaacatgccttgcccagcatttgcttctcaatactactctccattaaa i calJac3.chr12 C 0 C 0 e canFam3.chr4 27741535 2580 + 88276631 I e mm10.chr14 24187358 2914 + 124902244 I a score=143882.000000 s hg38.chr10_KI270825v1_alt 91993 42 + 188315 aggaatgaggactacttgggagaaatggccagtctccagggg s panTro4.chr10 76469920 42 + 133524379 aggaatgaggactacttgggagaaatggccagtctccagggg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76132505 42 - 133410057 aggaatgaggactacttgggagaaatggccagtctccagggg i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35074221 42 + 104879549 aggaatgaggactacttgggagaaatggccagtctccagggg i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73867877 42 - 130959383 aggaatgaggactacttgggagaaatggccagtctgcaggag i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75429417 42 - 133195287 aggaatgaggactacttgggagaaatggccagtctgcaggag i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73293021 42 - 125196307 aggaatgaggaCTACTTGGGAGAAATGGCCAGTCTGCAGGAG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72125740 42 - 125710982 aggaatgaggactacttgggagaaatggccagtctgcaggag i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75585364 42 - 121768101 aggaatgaggactacttgggagaaatggccagtctccaggag i calJac3.chr12 C 0 C 0 s mm10.chr14 24190272 34 + 124902244 AGGGAGGTGGCCGACTT--------TGGCCTGCCCCCAGCTG i mm10.chr14 I 2914 C 0 e canFam3.chr4 27741535 2580 + 88276631 I a score=5255143.000000 s hg38.chr10_KI270825v1_alt 92035 1341 + 188315 ctggg-CCTACCTGCTGCTGCTGGGCACGGAGGTCACCGATCTCCTTCTGGTCCTCCTCGTGGAGCCGCTTCATGTCCTCCCATGACTGCTGCAGCAGGTTTCGCTCCCGCAGCAGCTGCCCATTCTCCCGCCTCAGCATGTCCACGTCATCCTTCAGCCGAGTCTGGTCACTCAGGAGCCGGCTGTGGAGTGTGCTGAAACACCCGGTACATGCTCAGTGAGCCCCAGCCAGCCCCTCACACCCCGCCCCACCCCAGGGCATCACCAGCCTCAGGTCCCAACACTTCCCGTAGATACAGCGGACAGGAGCCAATGGCAGGTAGGTCTGTAGCACTCAGAGGCAAGCCAAAACCTGCTAACAGCCC-AATTCCAGAAACATCCAAATCACCACTT---ACAAACCTGACACCAAAAAGGGCACATGTAT---CTCCAGGGAAGGGAGACAGGCCCCTCTGGTACAGACCTAGTGCCTCCAAATACTGGGGCCTGG----ACAGATATCAGCAGGTGGGCAGGCAA---AGACC------CTCAGAGGGATGCTGGGAGACCAAAGGGAA--ACACCCCTTG-GGCCTACCCTACAGGAAGAAGCTGCAGTAGGGCCCCTGGACAGAGACCCAGAGGCCT------GCCTGAGCCCTGCTGCAT-GTTCTGAA---TCACTTTCAT------GCCTGCCAGGTCTCTGAAGCTGGCAATAA--GATGT---Gaaggattaatagccttgttttacacttaggaaaactgaggcccaaaggcacaaatccacctgctgtaggcagactgcttgct-cttgcacagggacaggactagaaccagaacccctggctactaagtccagAGA-AAAGAAGGGCA-AAGGCAGCTG-TCTGTGGGTGTTGGAGGCCCTGGCCAAGCAGGCCTCACTCACTGGTAGAAGTCAGTCTCCTTGGCCACCTCCTCACACCTCTTCAAGGCGTTGGTGTGCTGGTTCTGCAGGCTCTGCAGGTCCGACATGGCTCGCACGCACTGGATCTTCAGCCTCTCATAGTCAGGATTCAGCCTGTGGTAGGGCCTGGCCCAGAGAGCGAATGGCCCCATGAACACAGGCCCCAGGATTCACACGGATA--GAGGAACCAGGTCCTGGATTA-GGCCAGCCCAGTGGTTCCCCAGTACTGGTCTTCTATGCACCACACAcacctgggtgtttgttaaactcagatatcctggcctcactcagacccacagaatcagaatcCCTAGGATGGAGGGAGCCGTGGTTGCC-TGAGCTCCCTGCATGGGCCTGGAGAGCTAAGAAGGTGCCAACTTGTTCTGCAGGAGCTTCCAGGAGTCTGTACAACAGGTC-----------TGAGTCCACCAGAAACCTGTGAT s panTro4.chr10 76469962 1342 + 133524379 ctggg-CCTACCTGCTGCTGCTGGGCACGGAGGTCACCGATCTCCTTCTGGTCCTCCTCGTGGAGCCGCTTCATGTCCTCCCACGACTGCTGCAGCAGGTTTCGCTCCCGCAGCAGCTGCCCATTCTCCCGCCTCAGCATGTCCACGTCATCCTTCAGCCGAGTCTGGTCACTCAGGAGCCGGCTGTGGAGTGTGCTGAAACACCCGGTACATGCTCAGTGAGCCCCAGCCAGCCCCTCACACCCTGCCCCACCCCAGGGCATCACCAGCCTCAGGTCCCAACACTTCCCGTAGATACAGCGGACAGGAGCCAATGGCAGGTAGGTCTGTAGCACTCAGAGGCAAGCCAAAACCTGCTAACAGCCC-AATTCCAGAAACATCCAAATCACCACTT---ACAAACCTGACACCAAAAAGGGCACATGTAT---CTCCAGGGAAGGGAGACAGGCCCCTCTGGTACAGACCTAGTGCCTCCAAATACTGGGGCCTGG----ACAGATATCAGCAGGTGGGCAGGCAA---AGACC------CTCAGAGGGATGCTGGGAGACCAAAGGGAA--ACACCTCTTG-GGCCTACCCTACAAGAAGAAGCTGCAGTAGGGCCCCTGGACAGAGACCCAGAGGCCT------GCCTGAGCCCTGCTGCAT-GTTCTGAA---TCACTTTCAT------GCCTGCCAGGTCTCTGAAGCTGGCAATAA--GATGT---GaaggattaatagccttgttttacacttaggaaaactgaggcccaaaggcacaaatccacctgctgtaggcagactgcttgctgcttgcacagggacaggactagaaccagaacccctggctactaagtccagAGA-AAAGAAGGGCA-AAGGCAGCTG-TCTGTGGGTGTTGGAGGCCCTGGCCAAGCAGGCCTCACTCACTGGTAGAAGTCAGTCTCCTTGGCCACCTCCTCACACCTCTTCAAGGCGTTGGTGTGCTGGTTCTGCAGGCTCTGCAGGTCCGACATGGCTCGCACGCACTGGATCTTCAGCCTCTCATAGTCAGGATTCAGCCTGTGGTAGGGCCTGGCCCAGAGAGCGAATGGCCCCATGAACACAGGCCCCAGGATTCACACGGATA--GGGGAGCCAGGTCCTGGATTA-GGCCAGCCCAGTGGTTCCCCAGTACTGGTCTTCTATGCACCACACAcacctgggtgtttgttaaactcagatatcctggcctcactcagacccacagaatcagaatcCCTAGGATGGAGGGAGCCGTGGTTGCC-TGAGCTCCCTGCATGGGCCTGGAGAGCTAAGAAGGTGCCAACTTGTTCTGCAGGAGCTTCCAGGAGTCTGTACAACAGGTC-----------TGAGTCCACCAGAAACCTGTGAT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76132547 1343 - 133410057 ctggg-CCTACCTGCTGCTGCTGGGCACGGAGGTCACCGATCTCCTTCTGGTCCTCCTCGTGGAGCCGCTTCATGTCCTCCCACGACTGCTGCAGCAGGTTTCGCTCCCGCAGCAGCTGCCCATTCTCCCGCCTCAGCATGTCCACGTCATCCTTCAGCCGAGTCTGGTCACTTAGGAGCCGGCTGTGGAGTGTGCTGAAACACCCAGTACATGCTCAGTGAGCCCCAGCCAGCCCCTCACGCCCCGCCCCACCCCAGGGCATCACCAGCCTCAGGTCCCAACACTTCCCGTAGATACAGCGGACAGGAGCCAATGACAGCTAGGTCTGCAGCACTCAGAGGCAAGCCAAAACCTGCTAACAGCCCTAATTCCAGAAACATCCAAATCACCACTT---ACAAACCTGACACCAAAAAGGGCACACGTAT---CTCCAGGGAAGGGAGACAGGCCCCTCTGGTACAGAGCTAGTGCCTCCAAATACTGGGGCCTGG----ACAGATATCAGCAGGTGGGCAGGCAA---AGACC------CTCAGAGGGGTGCTGGGAGACCAAAGGGAA--ACACCCCTTG-GGCCTACCCTACAGGAAGAAGCTGCAGTAGGGCCCCTGGACAGAGACCCAGAGGCCT------GCCTGAGCCCTGCTGCAT-GTTCTGAA---TCACTTTCCT------GCCTGCCAGATCTCTGAAGCTGGCAATAA--GATGT---GaaggattaatagccttgttttacacttaggaaaactggggcccaaaggcacaaatctacctgctgtaggcagactgcttgccgcttgcacagggacaggactagaaccagaacccctggctactaagtccagAGA-AAAGAAGGGCA-AAGGCAGCTG-TCTGTGGGTGTTGGGGGCCCTGGCCAAGCAGGCCTCACTCACTGGTAGAAGTCAGTCTCCTTGGCCACCTCCTCACACCTCTTCAAGGCATTGGTGTGCTGGTTCTGCAGGCTCTGCAGGTCCGACATGGCTCGCACACACTGGATCTTCAGCCTCTCATAGTCAGGATTCAGCCTGTGGTAGGGCCTGGCCCAGAGAGCGAATGGCCCCATGAACACAGGCCCCAGGATTCACACGGATG--GGGGAGCCAGGTCCTGGATTA-GGCCAGCCCAGTGGTTCCCCAATACTGGTCTTCTATGTACCACACAcacctgggtgtttgttaaactcagatatcctggcctcactcagacccacagaatcagaatcCCTAGGATGGAGGGAGCCGTGGTTGCC-TGAGCTCCCTGCATGGGCCTGGAGAGCTGAGAAGGTGCCAACTTGTTCTGCAGGAGCTTCCAGGAGTCTGTACAACAGGTC-----------TGAGTCCACCAGAAACCTGTGAT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35074263 1342 + 104879549 ctggg-CCTACCTGCTGCTGCTGGGCACGGAGGTCACCGATCTCCTTCTGGTCCTCCTCATGGAGCCGCTTCATGTCCTCCCACGACTGCTGCAGCAGGTTTCGCTCCCGCAGTAGCTGCCCATTCTCCCGCCTCAGCATGTCCACGTCATCCTTCAGCCGAGTCTGGTCACTCAGGAGCCGGCTGTGGAGTGTGCTGAAACACCCGGTACATGCTCAGTGAGCCCCAGCCAGCCCCTCACACCTCGCCCCACCCCAGGGCATCACCAGCCTCAGGTCCCAACACTTCCTGTAGATACAGCGGACAGAAGCCAATGGCAGCTAGGTCTGCAGCACTCAGAGGCAAGCCAAAACCTGCTAACAGCCC-AATTTGAGAAACATCCAAATTACCACTT---ACAAACCTGACACCAAAAAGGGCACATGTAT---CTCCAGGGAAGGGAGACAGGCCCCTCTGGTACAGACCTAGTGCCTCCAAATACTGGGGCCTGG----GCAGATATCAGCAGGTGGACAGGCAA---AGACC------CTCAGGGGGGTGCTGGGAGACCAAAGGGAA--ACACCCCTTG-GGCCTATCCTACAGGAAGAAGCTGCAGTAGGGCCCCTAGACAGAGACCCAGAGGCCT------GCCTGACCCCTGCTACAT-GTTCTGAA---TCACTTTCCT------GTCTGCCAGGTCTCTGAAGCTGGCAATAA--GATGT---GaaggattaatagccttgttttacacttaggaaaactggggcccaaaggcacaaatccacttgctgtaggcagactgcttgctgcttgcacagggacgggactagaaccagaaaccctggctactaagtccagAGA-AAAGAAGGGCA-AAGGCAGCTG-TCTGTGGGTGTTGGGGGCCCTGGCCAAGCAGGCCTCACTCACTGGTAGAAGTCAGTCTCCTTGGCCACCTCCTCACACCTCTTCAAGGCATTGGTGTGCTGGTTCTGCAGGCTCTGCAGGTCTGACATGGCTCGCACGCACTGGATCTTCAGCCTCTCATAGTCAGGATTCAGCCTGTGGTAGGGCCTGGCCCAGAGAGAGAATGGCCCCATGAACACAGGCCCCAGGATTCACACGGACG--GGGAAGCCAGGTCCTGGATTA-GGCCAGCCcagtggttccccaatactggtcttctatgcaccacacacacctgggtgtttgttaaactcagataccctggcctcactcagacccacagaatcagaatccccaggATGGAGGGAGCCGTGGTTGCC-TGAGCTCTCTGCATGGGCCTGGAGAGCTGAGAAGGTGCCAACTTGTTCTGTAGGAACTCCCAGGAGTCTGTACAACAGGTC-----------TGAGTCCACCAGAAACCTGTGAT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73867919 1342 - 130959383 ctggg-CCTACCTGCTGCTGCTGGGCACGGAGGTCACCGATCTCCTTCTGGTCTTCCTCGTGGAGCCGCTTCATGTCCTCCCACGACTGCTGCAGCAGGTTTCGCTCCCGCAGCAGCTGCCCATTCTCCCGCCTCAGCATGTCCACGTCATCCTTCAGCCGAGTCTGGTCACTCAGGAGCCGGCTGTGGAGTGTGCTGAAACACCCGGTACATGCTCAATGAGCCCCAGCCAGCCCCTCACACCCTGCCCCACCCCAGGGCATCACCAGCCTCAGGTCCCAACACTTCCCGTAGATACAGCGGACAGGAGCCAATGGCAGCTAGGTCTGTAGCACTCAGAGGCAAGCCAAAACCTGCTAACAGCCC-AATTCCAGAAACATCCAAATCACCACTT---ACAAACCTGACACCAAAAAGGGCACATGTGT---CTCCAGGGAAGGGAGACAGGCCCCTCTGGTACAGACCTAGTGCCTCCAAATACTGGGGCCTGG----GCAGGTATCAGCAGGTGGGCAGGCAA---AGACC------CTCAGAGGGGTACTGGGAGACCAAAGGGAA--ACACCCCTTG-GGCCTATCCTCCAGGAAGAAGCTGCAGTACGGCCCCTGGACAGAGACCCAGAGACCT------GCCTGACTCCTGCTGCAT-GTTCTGAA---TCACTTTCCT------GCCCGCCAGGTCTCTGAAGCTGGCAATAA--GATGT---GagggattaacagccttgttttacacttaggaaaactggggcccaaaggcacaaatacaactgctgtaggcagactgcttgctgcttgcacagggacaggactagaaccagaacccctggctaccaagtccagAGA-AAAGAAGGGCA-AAAGCAGCTG-TCTGTGGATGTTGGGGGCCCTGGCCAAGCAGGCCTCACTCACTGGTAGAAATCAGTCTCCTTGGCCACCTCCTCACACCTCTTCAAGGCGTTGGTGTGCTGGTTCTGCAGGCTCTGCAGGTCCGACATGGCTCGCACGCACTGGATCTTTAGCCTCTCGTAGTCAGGATTCAGCCTGTGGTAGGGCCTGGCCCAGAGAGCAAACGGCCCCATGAACACAGGCCCCAGGATTCACACGGACA--GGGGAGCCAGGTCCTGGATTA-GGCCAGCCcagtggttcccaaatactggtcccctatgcaccacacacacctaagtgtttgttaaactcaggtatcctggcctcactcagatccacagaatcagaatccccaggatggagggagccaTGGTTGCC-TGAGCTCCCTGCATGGGCCTGGAGAGCTGAGATGGTGCCAACTTGTTCTGTAGGAGCTCCCAGGAGTCTCTACAACAGCTC-----------TGAGTCCACCAGAAACCTGTGAT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75429459 1342 - 133195287 ctggg-CCTACCTGCTGCTGCTGGGCACGGAGGTCACCGATCTCCTTCTGGTCTTCCTCGTGGAGCCGCTTCATGTCCTCCCACGACTGCTGCAGCAGGTTTCGCTCCCGCAGCAGCTGCCCATTCTCCCGCCTCAGCATGTCCACGTCATCCTTCAGCCGAGTCTGGTCACTCAGGAGCCGGCTGTGGAGTGTGCTGAAACACCCGGTACATGCTCAGTGAGCCCCAGCCAGCCCCTCACACCCTGCCCCACCCCAGGGCATCACCAGCCTCAGGTCCCAACACTTCCCGTAGATACAGCGGACAGGAGCCAATGGCAGCTAGGTCTGTAGCACTCAGAGGCAAGCCAAAACCTGCTAACAGCCC-AATTCCAGAAACATCCAAATCACCACTT---ACAAACCTGACACCAAAAAGGGCACATGTGT---CTCCAGGGAAGGGAGACAGGCCCCTCTGGTACAGACCTAGTGCCTCCAAATACTGGGGCCTGG----GCAGGTATCAGCAGGTGGGCAGGCAA---AGACC------CTCAGAGGGGTACTGGGAGACCAAAGGGAA--ACACCCCTTG-GGCCTATCCTCCAGGAAGAAGCTGCAGTACGGCCCCTGGACAGAGACCCAGAGACCT------GCCTGACTCCTGCTGCAT-GTTCTGAA---TCACTTTCCT------GCCCGCCAGGTCTCTGAAGCTGGCAATAA--GATGT---GagggattaacagccttgttttacacttaggaaaactggggcccaaaggcacaaatacaactgctgtaggcagactgcttgctgcttgcacagggacaggactagaaccagaacccctggctaccaagtccagAGA-AAAGAAGGGCA-AAAGCAGCTG-TCTGTGGATGTTGGGGGCCCTGGCCAAGCAGGCCTCACTCACTGGTAGAAATCAGTCTCCTTGGCCACCTCCTCACACCTCTTCAAGGCGTTGGTGTGCTGGTTCTGCAGGCTCTGCAGGTCCGACATGGCTCGCACGCACTGGATCTTTAGCCTCTCGTAGTCAGGATTCAGCCTGTGGTAGGGCCTGGCCCAGAGAGCAAACGGCCCCATGAACACAGGCCCCAGGATTCACACGGACA--GGGGAGCCAGGTCCTGGATTA-GGCCAGCCcagtggttcccaaatactggtcccctatgcaccacacacacctaagtgtttgttaaactcaggtatcctggtctcactcagatccacagaatcagaatccccaggatggagggagccaTGGTTGCC-TGAGCTCCCTGCATGGGCCTGGAGAGCTGAGATGGTACCAACTTGTTCTGTAGGAGCTCCCAGGAGTCTCTACAACAGCTC-----------TGAGTCCACCAGAAACCTGTGAT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73293063 1344 - 125196307 CTGGG-CCTACCTGCTGCTGCTGGGCACGGAGGTCACCGATCTCCTTCTGGTCTTCCTCGTGGAGCCGCTTCATGTCCTCCCACGACTGCTGCAGCAGGTTTCGCTCCCGCAGCAGCTgcccattctcccgcctcagcatgTCCACGTCATCCTTCAGCCGAGTCTGGTCACTCAGGAGCCGGCTGTGGAGTGTGCTGAAACACCCGGTACATGCTCAGTGAGCCCCAGCCAGCCCCTCacaccctgccccaccccaggccaTCACCAGCCTCAGGTCCCAACACTTCCCGTAGATACAGCGGACAGGAGCCAACGGCAGCTAGGTCTGTAGCACTCAGAGGCAAGCCAAAACCTGCTAACAGCCC-AATTCCAGAAATATCCAAATCACCACTT---ACAAACCTGACACCAAAAAGGGCACATGTGT---CTCCAGGGAAGGGAGACAGGCCCCTCTGGTACAGACCTAGTGCCTCCAAATACTGGGGCCTGG----GCAGGTATCAGCAGGTGGGCAGGCAA---AGACC------CTCAGAGGGGTACTGGGAGACCAAAGGGAATCACTCTCCTTG-GGCCTATCCTCCAGGAAGAAGCTGCAGTACGGCCCctggacagagacccagagacct------GCCTGACTCCTGCTGCAT-GTTCTGAA---TCACTTTCCT------GCCCGCCAGGTCTCTGAAGCTGGCAATAA--GATGT---GAGGGATTAACAGCCTTGTTTTACACTTAGGAAAACTGGGGCCCAAAGGCACAAATACAACTGCTGTAGGCAGACTGCTTGCTGCTTGCACAGGGACAGGACTAGAACCAGAACCCCTGGCTACCAAGTCCAGAGA-AAAGAAGGGCA-AAAGCAGCTG-TCTGTGGGTGTTGGGGGCCCTGGCCAAGCAGGCCTCACTCACTGGTAGAAGTCAGTCTCCTTGGCCACCTCCTCACACCTCTTCAAGGCGTTGGTGTGCTGGTTCTGCAGGCTCTGCAGGTCCGACATGGCTCGCACGCACTGGATCTTCAGCCTCTCGTAGTCAGGATTCAGCCTGTGGTAGGGCCTGGCCCAGAGAGCAAACGGCCCCATGAACACAGGCCCCAGGATTCACACGGACA--GGGGAGCCAGGTCCTGGATTA-GGCCAGCCCAGTGGTTCCCAAATACTGGTCCCCTATGAACCACACACATCTAAGTGTTCGTTAAACTCAGGTATCCTGGCCTCACTCAGATCCACAGAATCAGAATCCCCAGGATGGAGGGAGCCATGGTTGCC-TGAGCTCCCTGCATGGGCATGgagagctgagatggtgccaacTTGTTCTGTAGGAGCTCCCAGGAGTCTCTACAACAGCTC-----------TGAGTCCACCATAAACCTGTGAT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72125782 1342 - 125710982 ctggg-CCTACCTGCTGCTGCTGGGCACGGAGGTCACCGATCTCCTTCTGGTCCTCCTCGTGGAGCCGCTTCATGTCCTCCCACGACTGCTGCAGCAGGTTTCGCTCCCGCAGCAGCTGCCCATTCTCCCGCCTCAGCATGTCCACGTCATCCTTCAGCCGAGTCTGGTCACTCAGGAGCCGGCTGTGGAGTGTGCTGAAACACCCGGTACATGCTCAGTGAGCCCCAGCCAGCCCCTCACACCCTGCCCCACCCCAGGCCATCACCAGCCTCAGGTCCCAACACTTCCCGTAGATACAGCGGACAGGAGCCAATGGCAGCTAGGTCTGTAGCACTCAGAGGCAAGCCAAAACCTGCTAACAGCCC-AATTCCAGAAACATCCAAATCACCACTT---ACAAACCTGACACCAAAAAGGGCACATGTGT---CTCCAGGGAAGGGAGACAGGCCCCTCTGGTACAGACCTAGTGCCTCCAAATACTGGGGCCTGG----GCAAGTATCAGCAGGTGGGCAGGCAA---AGACC------CTCAGAGGGGTACTGGGAGACCAAAGGGAA--ACACTCCTTG-GGCCTATCCTCCAGGAAGAAGTTGCACTACGGCCCCTGGACAGAGACCCAGAGACCT------GCCTGACTCCTGCTGCAT-GTTCTGAA---TCACTTTCCT------GCCCGCCAGGTCTCTGAAGCTGGCAATAA--GATGT---GagggattaacagccttgctttacacttaggaaaactagggcccaaaggcacaaatacaactgctgtaggcagactgcttgctgcttgcacagggacagaactagaaccagaacccctggctaccaagtccagAGG-AAAGAAGGGCA-AAAGCAGCTG-TCTGTGGATGCTGGGGACCCTGGCCAAGCAGGCCTCACTCACTGGTAGAAGTCAGTCTCCTTGGCCACCTCCTCACACCTCTTCAAGGCGTTGGTGTGCTGGTTCTGCAGGCTCTGCAGGTCCGACATGGCTCGCACGCACTGGATCTTCAGCCTCTCGTAGTCAGGATTCAGCCTATGGTAGGGCCTGGCCCAGAGAGCAAACGGCCCCATGAACACAGGCCCCAGGATTCACATGGACA--GGGGAGCCAGGTCCTGGATTA-GGCCAGCCcagtggttcccaaatactggtcccctatgcaccacacacacctaagtgtttgttaaactcaggtatcctggcctcactcagatccacagaatcagaatccccaggatagagggagccaTGGTTGCC-TGAGCTCCCTGCATAGGCCTGGAGAGCTGAGATGGTGCCAACTTGTTCTGTAGGAGCTCCCAGGAGTCTCTACAACAACTC-----------TGAGTCCACCAGAAACCTGTGAT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75585406 1338 - 121768101 ctgag-CCTACCTGCTGCTGCTGGGCACGGAGGTCACCAATCTCCTTCTGGTCTTCCTCGTGGAGCCGCTTCATGTCCTCCCATGATTGCTGCAGCAAGTTTCGCTCCCGCAGCAGCTGCCCGTTCTCCCGCCTCAGCATGTCCACGTCATCCTTCAGCCGAGTCTGGTCACTCAGGAGCCGGCTGTGGAGTGTGCTGAAACACGCCACACATGCTCAGTGAGCCCCGGCCATCCCCTCACACCCCAACCCATCCCAGGGCATCACCAGCCTTAGGTCTCAACACTCTCCGTAGATACAGCAGACAGGAGCCAGTGGCAGCTAGGTCTGCAGCACTCAGAGGCAAGCCAAAACCTGCTAACAGACC-AATTCCAGAAACATCCAAATCACCTTTT---ACAAACCTGACACCAAAAAGGACACATGTGT---CTCCAGGGAAGGGAGGCAGGCACCTTTGGTACAGACCTAGTGCCACCAAATACTGGGACCTAG----GCAGATATCAGCAGGTGGGCAGGCAA---AGACC------CTCAGAGGGGTGCTGGGAAACCAAAGGGAA--ACACCCTGTG-GGCCTATCCTGCAGGAAGAAGCTGCAGTATGGCTCCTGGACAGAGACCCAGAGACCT------GCCTGACTCCTGCTGCAT-GTTCTGAA---TCACTTTCCT------GCCTGCCAGGTCTCTGAAGCTGGCAATAA--AATGT---Gaaggattaacagccttgttttacacttaggaaaactggggcccaaaggcacaaatccacctgctgtaggaagactgcttgctgagtg-ggacgggcagggctagaaccagaacccctggct--caattccCAAGA-AAAGAAGGGCA-AAGGCAGCTG-TCTGTGGGTATTGGGGGCCCTGGCCAAGCAGGCCTCACTCACTGGTAGAAGTCAGTCTCTTTGGCCACCTCCTCACACCTCTTCAAGGCGTTGGTGTGCTGGTTCTGCAGGCTCTGCAGGTCCGACATGGCCCGCACACACTGGATCTTCAGCCTCTCGTAGTCAGGATTCAGCCTGTGGTAGGGCCTGGCCCAGAAAGCAAACGGCCCCATGAACACAGGTTCCAGGATTCACACAGACA--GGGGAACTGGGTCCTGGATTA-GGCCAGCCcagtggttcccaaatactggtctcctgtgtaccacacacacctggttgtttgttaaactcagatatcctggcctcactcagacccacagaatcagaatccccaggatggagggagccaTGGTTGCC-TGAGATGCCTGCATGGGCCTGGAAAGCTGAGAAGGTG-CGACTTGTTCTGCAGGACCTCCCAGGAATCTGTGCAACAGGTC-----------TGAGTCCACCAGAAACCTGTGAT i calJac3.chr12 C 0 C 0 s mm10.chr14 24190306 1278 + 124902244 CGGAGTCCTACCTGCTGCTGCTGGGCCCGGAGGTCACCTATCTCCTTCTGGTCCTCTTCCCGGAGCCGCTTCATGTCCTCCCAGGACTGCTGCAGCAGATTGCGCTCCCTCCGCAGCTTCCCGTTCTCCCGTCTCAGCATGTCCACATCGTCCTTCAGCTGCGTCTGGTCACTCAGGAGCCGGCTGTGGAGGGTGCTAAACCCCACGGAGA-----CACTTAGCCCTGACCAATTTCTCC--CCACACTCCATCCCCAGGTA-------CCCTAGGTCCCCAAA-------GAGATCAA---GACAGTGGCC-GTAGGAGCCAGGCCCACAGTGTTCAGCAGGAGGCCAAACCCAGAGAACAAGCA-AACTCCAAAAAGACTCAA--CCCCAATTCAGAAAACCCCAACACCAAAAGGAATACAAATAC---TCCCAAGGGAAGGAGATCGTCCC----------AACCTCA-GCCTATATGCCCTGGGGCCTAGTACAACAGG-----GCAGGTAAA-GGGCAA---ACACC------CTCTCGGGGAGGTGAGGAAA--------GA--ACACCCCAGGCTGCCTGGCC--CATGAGTAAGCTGTAGTAAAGCCCCAAGCCAGAGATCCAGAGGTCTTGGGCAGGCTGACCCCTGCCTCAT-GTTTTTAAATCTCTCTCTCTTTTCGTAATCTGCCAGCT-TCTAAGACTGATAAGAC--AATGTTGGGAGGGGCTAACCATCTC-TTTCATGCTTAGTAAAACTGAGTCCAAGAGGCACAAGTCCTCTTGCAGAAGGAGGGCCACTTGCTA-------------AGTAAGAGAGCCAGAGCCCTGGACTCTCCTGTCCACAAACAGAGAAGGGCAGAAAGTGGCTACTTCACAAGTGCTGGGGCCTCT--CCCAGCATGA--CACTCACTGATAGAAGTCTGTCTCCTTGGCCACCTCCTCGCACCTCTTCAAGGCGTTGGTGTGCTGGTTCTGTAAGCTCTGCAGGTCCGACATGGCCCGCACACACTGGATCTTTAGCCTCTCATAATCAGGATTCAGCCTGTGGTAGGGCCTGGCCCCAGGAGCAAAGAACCCCATGAACACAGGCCTCGGGGATCACCGGAACT--CAGG--CTGTGTACTGGACTA--CCCAGCCCAGGGGATGGCGCATCCTGG-CTCCTATGTACTGTGACCTCCT-GGTGCTTATGAAACTT-GTTATCCTGGCTGCAGGCAG-----CAGAGGCAGGGGTGCAA--ATGGAGGGAGCCATGGCTTCCTTGAGTTCCCTCAGTATGCCTGGAGGGGCAGACTA--ACTATCTCTCTCTGT------TCCCAGGAGTCTATGCCACAGGTC-----------TGGGCTCATCAGAAA-CTGCGAT i mm10.chr14 C 0 C 0 s canFam3.chr4 27744115 1203 + 88276631 CTGGC-TCTACCTGCTGCTGTTGGGCCCGGAGGTCACCGATCTCCTTCTGGTCCTCCTCATGGAGCCGCTTCATATCCTCCCAAGACTGCTGCAGCAGGTTACGCTCCCGCAGCAGCTGTCCATTCTCCCGCCTCAGCATGTCCACATCGTCCTTCAGCTGGGTCTGGTCGCTCAGGAGCCGGCTGTGGAGTGTGCTACAACCCCC---ATACACACGGTGAAGCCCAGCCAGCCTCCACCCCTCCAGCCCCTCC--------------TCTCCTGCCCCTCCACGTCCC---AATACACCCGATGGGAGCCCACAGCAGTCAGGGCAGCAGCACTCAGAGGCAGGCCAAAGCGTGGTATCAGCCA-AATGCCAGAAAGACCCAAACCATTTTTT---AAAAACTTGAGACCAAGAAGAGCACACATATGAAGGCCAAGGCAAGGTGATGGGCCC---------ATACCTGGCAC------------AGGCCTGG----GCAAACGTCAGCAAGTGGGCGGGTAAGGCAGGCCAGTAAACTCAGAGGGGCCCCAGGAGACCCAGGGGAA--CATGCCCGGC-CACCTCTCCTACA-GCAGGAGCTGCAGCAAAGCCCCTGGACAG----CCA----TCT------GCCTGG--CCTACTGCCTAATTTTCAA---TCCCTTTCCT------ACCTGTTGTGCTTCCGAGTCTGTCACTAGCTGGTGT---AAAGGGTTCACAG-CTCACCCTACACTTAGAAAAACCGAGACCCAAAGACCCAAACTCTCTTGCTGAAGGC------------------------------------------CCACTAGCTGTTATAT---------------GGCA----------G-TCC--------------------------------CACTCACTGGTAGAAGTCGGTCTCCTTGGCCACCTCCTCGCACCTCTTCAAGGCGTTGGTGTGCTGCTTCTGCAGGCTCTGCAGGTCCGACATGGCCCGCACACACTGGATCTTCAGCCTCTCGTAGTCGGGATTCAGCCTGTGGTAGGGCCTGACCCAGACAGCAG------CAGTGAACACAGGCCCCGGGA-TCACTCGGACAACGGGTGTCTCTGCCCCGGGTAGCCTCCAGCCCAGT-GTCCCCGGACACTGGGGTTCTGTGCACCACAACCACCT-GATGCTTGTTCAACTCCCATATCCTGGCATC-CCCAAACCCA------CAGGATCCCTAGGGTGGAGG--GCCCTGGCTGCC-CAGGCTCCCTGGTTGAGCCTGGAGCGCTAAGAAGTTACTGTCTTACTCCCTAGCAGCTCCTGGGAACCTGTGCAGCAGGACTTGACACACAGTGGGCACACCAGAAACCTGTGAT i canFam3.chr4 I 2580 C 0 a score=65805.000000 s hg38.chr10_KI270825v1_alt 93376 20 + 188315 GAAATGTCTCTTCTCTGTAg s panTro4.chr10 76471304 20 + 133524379 GAAATGTCTCTTCTCTGTAg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76133890 20 - 133410057 GAAATGTCTCTTCTCTGTAg i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35075605 20 + 104879549 GAAATGTCTCTTCTCTGTAg i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73869261 20 - 130959383 GAAATGTCTCTTCTCTGTAg i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75430801 20 - 133195287 GAAATGTCTCTTCTCTGTAg i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73294407 20 - 125196307 GAAATGTCTCTTCtctgtag i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72127124 20 - 125710982 GAAATGTCTCTTCTCTGTAg i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75586744 20 - 121768101 GAAATGTCTCCTCTCTTTGG i calJac3.chr12 C 0 C 0 s mm10.chr14 24191584 20 + 124902244 GCTGCTTCGCCTGTCTTCAG i mm10.chr14 C 0 I 380 e canFam3.chr4 27745318 0 + 88276631 C a score=321177.000000 s hg38.chr10_KI270825v1_alt 93396 106 + 188315 gctcggcgtgacagctcgtgcctgtaatcccagcactttgggaggctgaggcaggtggatcacttgaagccaggggtttgagaccagcctgagcaacatggtgaaa s panTro4.chr10 76471324 106 + 133524379 gctcggcgtgacagctcgtgcctgtaatcccagcactttgggaggctgaggcaggtggatcacttgaagccaggggtttgagaccagcctgagcaacatggtgaaa i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76133910 104 - 133410057 gctcggcgtggcggcttgtgcctgtaatcccagcactttgggaggctgaggc--gtggatcacttgaagccaggggtttgagaccagcctgagcaacatggtgaaa i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35075625 106 + 104879549 gctcggcgtggtggctcgcacctgtaatcccagcactttgggaggccgaggcaggtgcatcacttgaagccaggggtttgagaccagcctgagcaacatggtgaaa i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73869281 106 - 130959383 gctgggcatggtggctcacacctgtaatcccagcactttgggaggccgaggcgggtggatcgcttgaagccaggggtttgagaccagcctgagcaacatggtgaaa i rheMac3.chr9 C 0 I 1067 s macFas5.chr9 75430821 106 - 133195287 gctgggcatggtggctcacacctgtaatcccagcactttgggaggccgaggcgggtggatcgcttgaagccagggatttgagaccagcctgagcaacatggtgaaa i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73294427 106 - 125196307 gctgggcgtggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcacttgaagccaggggttggagaccagcctgagcaacatggtgaaa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72127144 106 - 125710982 gctgggcatggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcgcttgaagccaggggtttgagaccagcctgagcaacatggtgaaa i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75586764 106 - 121768101 ACTTggcatggtggcttatgcctgtaatcccagcactttgggaggccaaggcgggtggatcagtttaagtcaagggtttgagaccagcctgagcaacatggtgaaa i calJac3.chr12 C 0 C 0 e canFam3.chr4 27745318 0 + 88276631 C e mm10.chr14 24191604 380 + 124902244 I a score=431989.000000 s hg38.chr10_KI270825v1_alt 93502 211 + 188315 ccccgcctccacaaaaaaaaatacaaaaattagcctggtgtggtggcatgtgcctgtagtcccagctactcaggaggctaacgtgggaggatcacttgagcccaggaggtcgaggatgcagtgagccgagatcacaccactgcactccagcctgggcaacagagaggatcctgtctcaaaaataattactaaataaataaataaataaata s panTro4.chr10 76471430 206 + 133524379 ccccgcctctac-aaaaaaaatacaaaaattagcctgttgtggtggcatgcgcctgtagtcccagctactcaggaggctaacgtgggaggatcacttgagcccaggaggtcgaggatgcagtgagccgagatcacaccactgcactccagcctgggcaacagagaggatcctgtctcaaaaataaTTAC----taaataaataaataaata i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76134014 210 - 133410057 ccctgcctctac-aaaaaaaatacaaaaattagcctggcgtggtggcatgtgcctgtagtcccagctacgcaggaagctaaggtgggaggatcacttgagcccaggaggtcgaggatacagtgagccgagatcacaccactgcactccagcctgggcaacagagaggatcctgtctcaaaaataataaataaataaataaataaataaata i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35075731 197 + 104879549 ccccacctcta--gaaaaaaatacaaaaattagcctggcgtggtggcatgtgcctgtagtcccagctactcaggaggctaaggtgggaggatcacttgagcccaggaggttgaggatgcagtgagccgagatcacaccactgcactccagcctgggcaacagagaggatcctgtctcaaaaa-----------taaat-aataaataaata i nomLeu3.chr18 C 0 C 0 s macFas5.chr9 75430927 199 - 133195287 ccccgcctcta--caaaaaaataaaaaaattagcctggtgtggtggcatgcgccggtagtcccagctactcaggaggctaaggtgggaggaacacttgagcccagaaggttgaggatgcagtgagtcaagatcacaccactgcattccagcctgggcaacagagatgatcctgtctcaaaaataa--------taaataa--aataaaata i macFas5.chr9 C 0 I 4 s papAnu2.chr9 73294533 199 - 125196307 ccccgcctcta--caaaaaaatttaaaaattagcctggtgtggtggcatgcgccggtagtcccagctactcaggaggctaaggtgggaggaacacttgagcccagaaggttgaggatgcagtgagtcaagatcacaccactgcattccagcctgggcaacagagaggatcctgtctcaaaaataa--------taaataa--aataaaata i papAnu2.chr9 C 0 I 4 s chlSab2.chr9 72127250 199 - 125710982 ccccacctcta--caaaaaaattaaaaaattagcctggtgtggtggcaagcgccggtagtcccagctactcaggaggctaaggtgggaggatcacttgagcccagaaggttgaggatgcagtgagtcaagatcacaccactgcattccagcctgggcaacagagaggatcctgtctcaaaaataa--------taaataa--Cataacata i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75586870 199 - 121768101 cccttcctcta--ccaaaaagtacaaaaattagcctggtgtggtgatatgcacctgcagtcccagctactcagggagctgaggtgggaggatcacttgagcccaggaggtcaaggatgcagtaagccaatatcacaccactgcattccagcctgggcaacagagaggatcctgtctcaaaaataa--------taaataaataaataaa-- i calJac3.chr12 C 0 C 0 e canFam3.chr4 27745318 0 + 88276631 C e mm10.chr14 24191604 380 + 124902244 I e rheMac3.chr9 73869387 1067 - 130959383 I a score=46816.000000 s hg38.chr10_KI270825v1_alt 93713 21 + 188315 aAAGTAAAATATTAAAGAAAA s panTro4.chr10 76471636 21 + 133524379 aaAGTAAAATATTAAAGAAAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76134224 21 - 133410057 aataaaaaatattaaagaaaa i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35075928 16 + 104879549 aaaataaaATATT-----AAA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73870454 21 - 130959383 aaaataaaatattaaataaaa i rheMac3.chr9 I 1067 C 0 s macFas5.chr9 75431130 21 - 133195287 aaaataaaatattaaataaaa i macFas5.chr9 I 4 C 0 s papAnu2.chr9 73294736 21 - 125196307 aaaataaaatattaaataaaa i papAnu2.chr9 I 4 C 0 s chlSab2.chr9 72127449 20 - 125710982 -acataaaatattaaataaaa i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75587069 17 - 121768101 ----taaaatattaaataaaA i calJac3.chr12 C 0 C 0 e canFam3.chr4 27745318 0 + 88276631 C e mm10.chr14 24191604 380 + 124902244 I a score=3009528.000000 s hg38.chr10_KI270825v1_alt 93734 956 + 188315 GAAATTTCTCCTCTCTTTAGAAcaatgactctcaatcttgggtacacattaaaataccaatgccca---ggtcaattacattagcatatctgaggataaaacccaaacgtgaggattttttaaaaactccccagggtattccaatgtgcaaccaaggttaagaacactgGCCATGAGcagtga-tctcagagtggggttcccagacctgcagca-cagtatcacctgggaacttgtcacaaatagacattctcaggcc-tagccccagccccagccctcctgagtcaggtgttctgaagggagggaaagagaggcaatgatctgtgc---attaacaagctctgtggatgattctggtgca--------tgctcaagtttgaggaccCTTTTTCTAGAGcagaggtcagcaaac-------------------tttttttgcaaaaggccacacag-taaatactttaggctttgcacactacatagtttctgttgcaaccactcgactccacctttgtagcaggaaagcagtcatagacactttgtaaccaatgagcatggctgtgttccaataaaacttcatttataaaacaggcagtg----------ggcccgtgggccatagtgtgccaactcTCATGTGC-----TAGCACATCCACGTCTTCACTCATCCTGCCTTCGGGCCAACTGACTGAGGGGCATATCCTCATGAATACAAGCTCAGGGATCAGGCTCTGCAGCTCTGGCATAATCCCAGAGGCACAAAGTGCAGAGGCATAGACCCTTACTCCTGAAGGAAAGAGGTGAA------ACTGAAGTGTTTACACC-AAGCCCCCCTCCCCTCCAGAC--CTCTACCAGCATGGGAGCT----AAAGGATAAACCACTCTCTGGCCCTCCTCCTTCCCAGAAAGTCCTCTTAGATCATGCAGGTAGATAAAGA--CTCTCTCTGCCCCACCCTATGGGCCACCCTTCCCTGGTATCTACCTCTAAATCACAACAAAA---GCAGCAA s panTro4.chr10 76471657 956 + 133524379 GAAATTTCTCCTCTCTTTAGAAcaatgactctcaatcttgggtacacattaaaataccaatgccca---gatcaattacattagcatatctgaggataaaacccaaacgtgaggatttttaaaaaactccccagggtattccaatgtgcaaccaaggttaagaacactgGCCATGAGcagtga-tctcagagtggggttcccagacctgcagca-cagtatcacctgggaacttgtcacaaatagacattctcaagcc-tagccccagccccagccctcctgagtcaggtgttctgaagggagggaaagagaggcaatgatctgtgc---attaacaagctctgtggatgattctggtgca--------tgctcaagtttaaggaccCTTTTTCTAGAGcagaggtcagcaaac-------------------tttttttgcaaaaggccacacag-taaatactttaggctttgcacactacatagtttctgttgcaaccactcgactccacctttgtagcaggaaagcagtcatagacactttgtaaccaatgagcatggctgtgttccaataaaacttcatttataaaacaggcagtg----------ggcccgtgggccatagtgtgccaactcTCATGTGC-----TAGCACATCCACGTCTTCACTCATCCTGCCTTCGGGCCAACTGACTGAGGGGCATATCCTCATGAACACAAGCTCAGGGATCAGGCTCTGCAGCTCTGGCATAATCCCAGAGGCACAAAGTGCAGAGGCATAGACCCTTACTCCTGAAGGAAAGAGGTGAA------ACTGAAGTGTTTACACC-AAGCCCCTCTCCCCTCCAGAC--CTCTACCAGCATGGGAGCT----AAAGGATAAACCACTCTCTGGCCCTCCTCCTTCCCAGAAAGTCCTCTTAGATCATGCAGGTAGATAAAGA--CTCTCTCTGCCCCACCCTATGGGCCACCCTTCCCTGGTATCTACCTCTAAATCACAACAAAA---GCAGCAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76134245 957 - 133410057 gaaaTTTCTCCTCTCTTTAGAAcagtgactctcaatcttgggtacacattaaaataccaatgccca---gctcaattacattagcatatctgaggataagacccaaacgtgaggattttttaaaaactcctcaggggattccaatgtgcaaccaacgttaagaacactgGCCACGAGcagtga-tctcagagtggggttcctagacctgcagca-cagtatctcctgggaacttgtcacaaatagacattctcaggcc-tagccccagccccagccctcgtgagtcaggtgctctgaagggagggaaagagaggcaatgatctgtgc---attagcaagctctgtggatgattctggtgca--------tgctcaagtttgaggaccCTTTTTCTAGAGcagaggtcagcaaac-------------------tttttttgcaaaaggccacacag-taaatactttaggctttgcacactacatagtttctgttgcaatcactcgactccacctttgtagcaggaaagcagtcatagacactttgtaaccaatgagcatggctgtgttccaataaaacttcatttataaaataggcagtg----------ggcccgtgggccatagtgtgccaactcTCATGTGC-----TAGCACATCCATGTCTTCACTCATCCTGCCTTCGGGCCAACTGACTGAGGGGCATATCCTCATGAATACAAGCTCAGGGATCAGGCTCTGCAGCCCTGGCATAATCCCAGAGGCACAAAGTGCAGAGGCATAGACCCTTACTCCTGAAGGAAAGAGGTGAA------ATTCAAGTGTTTACACCAAAGCCCCTCTCCCCTCCAGAC--CTCTACCAGCATGGGAGCT----AAAGGATAAACCACTCTCTGGCCCTCCTCCTTCCCAGAAAGTCCTCTTAGATCATGCAGGTAGATAAAGA--CTCTCTCTGCCCCACCCTATGGGCCACCCTTCCCTGGTATCTACCTCTAAATCACAACAAAA---GCAGCAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35075944 940 + 104879549 GAAATTTCTCCTCTCTTTAGAAcagtgactctcaatcttgggtacacattaaaataccaatgccca---gatcaattacattagcatatctgagggtaagacccaaacgtgaggattttttaaaaactccccaggggattccaatgtgcaaccaaggttaagaacactgGCCATGAGcagtga-tctcagag-ggggttcccagacctgcagca-caatatcacctgggaacttgtcacaaatagacattctcaggcc-tagccccagccccagccctcctgagtcaggtgttctgaagggagggaaagagaggcaatgatctgtgc---attaacaagctctgtggatgattctggtgca--------tgctcaagtttgaggaccCTTTTTCTAGAGcagaggtcagcaaac-------------------tttttttgcaaaaggccacacag-taaatactttaggctttgcacactacatagtttctgttgcaaccactcaattccgcctttgtagcaggaaagcagtcatagacactttgtaaccaatgagcatggctgtgttccaataaaacttcatttataaaacaggcagtg----------ggccggtgggccatagtgtgccaactcTCATGTCC-----TAGCACATCCACGTCTTCACTTATCCTGCCTTCGGGCCAACTGACTGAGGGGCATATCCTCATGAATACAAGCTCAGGGATCAGGCTCTGCAGCCCTAGCATAATCCCAGAGGCAC---------------AGACCCTTGCTCCTGAAGGAAAGAGGTGAA------ATTGAAGTGTTTACACC-AAGCCCCTCTCCCCTCCAGAC--CTCTACCAGCATGGCAGCT----AAAGGATAAACCACTCTCTGGCCCTCCTCCTTCCCAGAAAGTCCTCTTAGATCATGCAGGTAGATAAAGA--CTCCCTCTGCCCCACCCTATGGGCCACCGTTCCCTTTTATCTACCTCTAAATCACAACAAAA---GCAGCAA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73870475 958 - 130959383 gaaaTCTCTCCTCTCTTTAGAAcagtgactgtcaatcttgggtacacattaaaataccaatgccca---gatcaattacattagcatttctaaggataagacccaaacatgagaattttt-aaaaactccccaggg-attccaatgtgcaaccaaggttaagaatactgGCCATGAGcagtga-tctcagagtagggttcccagacttgcaaca-cagtatcatctgggaacttgtcacaaatagacattctcaggcc-tagccccagccccagtcctcctgagtcaggtgttctgaagggagggaaagagaggcaatgatctgtgcattattaacaagctttgtgggtgattctggtgca--------tgctcaagtttgaggaccCTTTTTCTAGAGcagaggtcagcagac-------------------tttttttgcgaaaggccacatag-taaatacttaaggctttgcacactacatggtttctgttgcaaccactcaactctgcctttgtagcaggaaagcagtcatagacactttgtaaccaatgagcatggctgtgttccaataaaacttcatttataaaacaggcagtg----------ggcccgtgggccacagtgtgccaactcTCCTGTGC-----TAGCACATTCACGTCTTCACTCGTCCTGCCTTTGGGCCAAATGACTGAGGGGCAGATCCTCACGAATATAAGCTCAAGGATCAGGCTCTGCAGCCCTGGCATAATCCCAGAGGCACAGAGTGCAGAGGCATAGGCCCTTGCTCCTGAAGGAAAGAGGTGAA------ACTGAAGTGTTTACACC-AAG-CCCTCTTCCCTCCAGAC--CTCTACCAGCATGGGAGCT----AAAGGAGAAACCACTCTGTGGCCCTCCTCCTTCCCAGAACGTCCTCTTAGATCATGCAGGTAGATAAAGACTCTCTCTCTGCCCCACCCTACGGGCCACGCTTCCCTGGTATCTACCTCTAACTCACAACAAAA---GAAGCAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75431151 958 - 133195287 GAAATCTCTCCTCTCTTTAGAAcagtgactgtcaatcttgggtacacattaaaataccaatgccca---gatcaattacattagcatttctaaggataagacccaaacatgagaattttt-taaaactccccaggg-attccaatgtgcaaccaaggttaagaatactgGCCATGAGcagtga-tctcagagtagggttcccagacttgcaaca-cagtatcatctgggaacttgtcacaaatagacattctcaggcc-tagccccagccccagtcctcctgagtcaggtgttctgaagggagggaaagagaggcaatgatctgtgcattattaacaagctctgtgggtgattctggtgca--------tgctcaagtttgaggaccCTTTTTCTAGAGcagaggtcagcagac-------------------tttttttgcgaaaggccacatag-taaatacttaaggctttgcacactacatggtttctgttgcaaccactcaactctgcctttgtagcaggaaagcagtcatagacactttgtaaccaatgagcatggctgtgttccaataaaccttcatttataaaacaggcagtg----------ggcccgtgggccacagtgtgccaactcTCATGTGC-----TAGCACATTCACGTCTTCACTCGTCCTGCCTTTGGGCCAAATGACTGAGGGGCAGATCCTCACGAATATAAGCTCAAGGATCAGGCTCTGCAGCCCTGGCATAATCCCAGAGGCACAGAGTGCAGAGGCATAGGCCCTTGCTCCTGAAGGAAAGAGGTGAA------ACTGAAGTGTTTACACC-AAG-CCCTCTTCCCTCCAGAC--CTCTACCAGCATGGGAGCT----AAAGGAGAAACCACTCTGTGGCCCTCCTCCTTCCCAGAACGTCCTCTTAGATCATGCAGGTAGATAAAGACTCTCTCTCTGCCCCACCCTACGGGCCACGCTTCCCTGGTATCTACCTCTAACTCACAACAAAA---GAAGCAA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73294757 956 - 125196307 gaaatctctCCTCTCTTTAGAACAGTGACTGTCAATCTTGGGTACACATTAAAATACCAATGCCCA---GATCAATTACATTAGCATCTCTAAGGATAAGACCCAAacatgagaattttt-aaaaactccccagGG-ATTCCAATGTGCAACCAAGGTTAAGAACACTGGCCATGAGCAGTGA-TCTCAGAGTAGGGTTCCCAGACTTGCAACA-CAGtatcatctgggaacttgtcACAAATAGACATTCTCAGGCCTTAGCCCCAGCCCCAGTCCTCCTGAGTCAGGTGTTctgaagggagggaaagagaggcaaTGATCTGTGC---ATTAACAAGCTCTGTGGGTGATTCCGGTGCA--------TGCTCGAGTTTGAGGACCCTTTTTCTAGAGCAGAGGTCAGCAGAC-------------------tttttttGCGAAAGGCCACATAG-TAAATACTTAAGTCTTTGCACACTACATGGTTTCTGTTGCAACCACTCAACTCTGCCTTTATAGCAGGAAAGCAGTCATAGACACTTTGTAAccaatgagcatggctgtgttccaataaaacttcatttataaaacaggcagtg----------ggccCGTGGGCCACAGTGTGCCAACTCTCATGTGC-----TAGCACATTCACGTCTTCACTCGTCCTGCCTTTGGGCCAAATGACTGAGGGGCAGATCCTCACGAATATAAGCTCAAGGATCAGGCTCTGCAGCCCTGGCATAATCCCAGAGGCACAGAGTGCAGAGGCATAGACCCTTGCTCCTGAAGGAAAGAGGTGAA------ACTGAAGTGTTTACACC-AAG-CCCTCTTCCCTCCAGAC--CTCTACCAGCATGGGAGCT----AAAGGAGAAACCACTCTGTGGCCCTCGTCCTTCCCAGAACGTCCTCTTAGATCATGCAGGTAGATAAAGACTCTCTCTCTGCCCCACCCTACGGGCCACGCTTCCCTGGTATCTACCTCTAACTCAcaacaaaa---gaagcaa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72127469 948 - 125710982 gaaaTCTCTCCTCTCTTTAGAAcagtgactgtcaatcttgggtacacattaaaataccaatgccca---gatcaattacattagcatctctaaggataagacctaaacatgagaattttt-aaaaactccccaggg-gttccaatgtgcaaccaaggttaagaacactgGCCATGAGcagtga-tctcagagtagggttcccaaacttgcaaca-cagtatcatctgggaacttgtcacaaatagatattctcaagcc-tagccccagccccagtcctcctgagtcaggtgttctgaagggagggaaagagaggcaatgatctgtgc---attaacaagctctgtgggtgattctggtgca--------tgctcaagtttgaggaccCTTTTTCTAGAGcagaggtcagcagac------------------ttttttttgcgaaaggccacatag-taaatacttaaggctttgcacactacatggtttctgttgcaaccactcaactctgcctttgtagcaggaaagcagtcatagacactttgtaaccaatgagcatggctgtgttccaataaaacttcatttataaaacaggca------------------gtgggccACAGTGTGCCAACTCTCATGTGC-----TAGCACATTCACGTCTTCACTCGTCCTGCCTTTGGGCCAAATGGCTGAGGGGCAGATCCTCACGAATATAAGCTCAAGGATCAGGCTCTGCAGCCCTGGCATAATCCCAGAGGCACAGAGTGCAGAGGCATAGACCCTTGCTCCTGAAGGAAAGAGGTGAA------ACTGAAGTGTTTACACC-AAG-CCCTCTTCCCTCCAGAC--CTCTACCAGCATGGGAGCT----AAAGGATACACCACTCTGTGGCCCTCCTCCTTCCCAGAACATCCTCTTAGATCATGCAGGTAGATAAAGACTCTCTCTCTGCCCCACCCTACAGGCCACCCTTCCCTGGTATCTACCTCTAACTCACAACAAAA---GAAGCAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75587086 942 - 121768101 GAAATTTCTCCTATCTTTAGAACAATAACTCTCAATCTTGGGTATGCATTaaaataccaatgcccccctgatcaattacattagcctctctaaggataagcaccaaacatcaggattttttaaaacctccccaggggattccaatttgcaaccaaggttaagaacactgGCCATAAGcagtggttctcagagtagggttcccagacctgcagca-cagtatcacctgggaactcgacagaaatagacattctcgggcc-tagtctcagccccagccctcctgagtcagatgctctgaagggagggaaagagaggtcatgatctgtgc---attaacaagctctgtgggtgattctggtgcagaatctgctgctcaaacttgaggacGCTTTTTACAGAGCGGAGGTCAGCAAACTTTATTTTATTTTATTTTTtttttttgcaaaaggtcatagag-taaatacttcaggcttttcatactatatagtttctgttgcagccactcaaccccacctttgtagcagaaaagcactcatagacactttgtaaccaatgagcatggctgtgttccaatgaaacttcatttataaaacaggcagtgggccacccttggccggtgggccatagtgtgccagctcTCATGTGCTAGCATAGCACATCGATGTCTT----------------------------------------------GAACACAAGCTCGGGAATCAGACTCTGCAGCCCTGGCATAATCCCAGAGGCACAGATTGCAGAGGCACAGACCCTTGCTCCTGAAAGAAACAGGTGAA------ACTAAAGTGTTTGCACC-AGGCCCCTCTCCCCTCCAGACCTCTCTACCAGCATGGGAGCT----AAAGAATAAACCACTCTCTGGCCCTCCTCCTTCCCAGAAAGTCCTCTCAGATCATGCAGGTAGATAAAGA--CTCTCTCTGCCCCACTCTATGGG-------------GTATCTACCTCTAAATC---ACAAAA---GCAACAA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27745318 784 + 88276631 GAAGCTTCTCCTCTTTTTAAGAAAGTGACTGTCAATCTTGGGAACCCAGCAAAATACCAAGGccca---gaccaattacatcagcatccttggggatgtgacccagac-------------aga----caccaggggattctggtgtgtcaccactgttgagaacactgGCCAGGAGCACCGCttctcagagtggggtccccagacctgcagcattagtttcacctgggaatatgcta-gagtgcaaaccctcaggtc--------agccccagaactcctgaatcagacacgtgggagggagggaggcctaagcagcaatctatgc---cttaacaagccctct-gatga-cctggtgca--------cgctcgagtttgagaacccctgCCCTACAGCTGGCGTTCATaact-------------------tttctctgtcaagggccagacaattaaatgctgtaggctctgctagccatagagcctctg-tgtaactactc-cttctgccttgggaccacg--------------------------------------------------------------------aggca-------------ggccc-tggacaata-tgtaCT------------C-----TAGCAC-CCCGTGTCTCCACTGGCCCTGGCTCTGTGC-------------------------------TGAGCTCAGAGAATAGGCTTTGCAGCCCTGCCATCAGCCCAGAGGAAC--------------------CTTCCTC-----AGGATGAGGCACATCCATGCCTGATGCTCCTAAGGC-AAT-CCCCCTCACCTCAGAAG--CCCAACCAGCAT-----CTCCCAGAAGAATGAATCACACTGTATCCCTCCTC--TTCCACGAAGCCCTCCTGGAT-GGGCAAGCGGGTAAAGACTCTCTCTTTGCCCCACCCCGCGGA---------CCTGGTATC-ACCTCTGAATTCCAACAAAAGACGAATCAA i canFam3.chr4 C 0 C 0 e mm10.chr14 24191604 380 + 124902244 I a score=276111.000000 s hg38.chr10_KI270825v1_alt 94690 81 + 188315 ACATTTTCTTCAAAGCAACAAAGACACCAGGTACAATGTGCTCTGTTTAAAACACAT-CATGTGGggccagacactgtggct s panTro4.chr10 76472613 81 + 133524379 ACATTTTCTTCAAAGCAACAAAGACACCAGGTACAATGTGCTCTGTTTAAAACACAT-CATGTGGggccagacactgtggct i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76135202 81 - 133410057 ACATTTTCTTCAAAGCAACAAAGACACCAGGTAGAATGTGCTCTGTTTAAAACACAT-CATGTGGggccagacactgtggct i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35076884 81 + 104879549 AAATTTTCTTCAAAGCAACAAAGACACCAGGTAGAATGTGCTCTGTTTAAAACACAT-CATATGGggccagacactgtggct i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73871433 81 - 130959383 ACATTTTCTTCAAAGCAACAGAGACACCAGGTAGAATGTGGTCTGTTTAAAACACAT-CATGTGGggccagacgctgtggtt i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75432109 81 - 133195287 ACATTTTCTTCAAAGCAACAGAGACACCAGGTAGAATGTGGTCTGTTTAAAACACAT-CATGTGGggccagacgctgtggtt i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73295713 81 - 125196307 aaattttcttcaaagCAACAAAGACACCAGGTAGAATGTGGTCTGTTTAAAACACAT-CATGTGGGGCCAGacgctgtggtt i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72128417 81 - 125710982 AAATTTTCTTCAAAGCAACAAAGACACCAGGTAGAATGTGGTCTGTTTAAAACACAT-CATGTGGggccagacgctgtggtt i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75588028 77 - 121768101 AAATTTTCTTCAAAGCCACAAAGACACCAGGTAGAATGTG--CTGTTT--AATACAT-CATGAGGggccagatgctgtggct i calJac3.chr12 C 0 C 0 s mm10.chr14 24191984 81 + 124902244 ATATTTTCTCCAAAAACAAAAGGATACCAGGTAAAATGTAC-CTTTACAAGACACCTACATGTCAAGAACGACATAGGGGTT i mm10.chr14 I 380 I 704 s canFam3.chr4 27746102 79 + 88276631 AGATTTTCTCCAAAACAGCAAAGAAGCCAGGCGGTATATATCCT-CCAAAAACGCA--CATGCAGCAGGAAGAATTAAGGTG i canFam3.chr4 C 0 C 0 a score=33586.000000 s hg38.chr10_KI270825v1_alt 94771 12 + 188315 cacgcctgtaat s panTro4.chr10 76472694 12 + 133524379 cacgcctgtaat i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76135283 12 - 133410057 catgcctgtaat i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35076965 12 + 104879549 cacgcctgtaat i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73871514 12 - 130959383 cacgcctgtaat i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75432190 12 - 133195287 cacgcctgtaat i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73295794 12 - 125196307 cacgcctgtaat i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72128498 12 - 125710982 cacgcctgtaat i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75588105 11 - 121768101 c-tacctattat i calJac3.chr12 C 0 C 0 s canFam3.chr4 27746181 12 + 88276631 TGCACTTGTCAC i canFam3.chr4 C 0 I 403 e mm10.chr14 24192065 704 + 124902244 I a score=1294014.000000 s hg38.chr10_KI270825v1_alt 94783 455 + 188315 tccagcactctgggaggccaaggcaggaggatcactggagcctagaagcccaagaccagcctgggcaaaaaagaaagaccctgctgctacaaaaa-aatt---aaaaaaaaaaaattagttgggcatggtggcacacacctatagtcccagctacttggaaggctgaggtgggaggttcacttgagccggggaggtcaaaactgcattgaaccatgattgtgccactgcattctagcccaggcaacagagcaagaccccgtctcaaaaaacaaataaaaCACATGTGTGACAGGGAACAATTAATATGTTTACCAACCACATAAAGCTTCACTCAACTTAGGCAGGTCTAGGAGACAGTGGTAGGGac-----------------------------------------acacacacacacacacacacacacGAGCTGACTTTGCACACAAGCACACCACTA-TCAGGGGCCTTGCCACATGTGGGATGGGGACCTGCCC s panTro4.chr10 76472706 452 + 133524379 tccagcactctgggaggccaaggcaggaggatcactggagcctagaagctcaagaccagcctgggcaaaaaagaaagaccctgctgctacaaaaa-aatt--aaaaaaaaaaaaattagttgggcgtggtggcacacacctatagtcccagctacttggaaggctgaggtgggaggttcacttgagccggggaggtcaaaactgcattgaaccatgattgtgccactgccttctagcccaggcaacagagcaagaccccgtctcaaaaaacaaataaaaCACATGTGTGACAGGGAACAATTAATATGTTTACCAACCACATAAAGCTTCACTCAACTTAGGCAGGTCTAGGAGACAGTGGTAGGG---------------------------------------------acacacacacacacacacacacGAGCTGACTTTGCACACAAGCACACCACTA-TCAGGGGCCTCGCCACATATGGGATGGGGACCTGCCC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76135295 448 - 133410057 tccagcactctgagaggccaaggcaggaggatcactggagcctagaagctcaagaccagcctgggcaaaaaagaaagaccctgctgctacaaaaa-aatt--aaaaaaaaaaaaattagttgggcatggtagcacacacctatagtcccagctactcagaaggctgaggtgggaggttcacttgagccggggaggtcaaaactgcattgaaccacgattgtgccacttcattctagcccaggcaacagagcaagaccccgtctcaaaaaacaaataaaaCACATGTGTGACAGGGAACAATTA--ATGTTTACCAACCACATAAAGCTTCACTCAACTTAGGCAGGTCTAGGAGACAGTAGTAGGG-----------------------------------------------acacacacacacacacacacGAGCTGACTTTGCACACAAGCACACCACTA-TCAGGGGCCTCGCCACATGTGGGATGGGGACCTGCCC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35076977 499 + 104879549 tccagcactccgggaggccaaggcaggaggatcactggagcctagaagctcaagaccagcctaggtaacaaagaaagaccctgctgctacaaaaa-aattaaaaaaaaaaaaaaattagttgggcgtggtggcacacacctacagtcctagctacccggaaggctgaggtgggaggttcacttgagccggggaggtcaaaactacattgaaccatgattgtgccactgcattctagcccaggcaacagagcaaaaccccgtctcaaaaaacaaataaaaCACATGCGTGGCAGGGAACAATTAATATGTTTACCAACCACATAAAGCTTCACTCAACTTAGGCAGGTCTAGGAGACAGTGGTAGGGacacacacacacacaaacacacacacaagagagagtggtagggacacacacacacacacacacacacGAGCCGACTTTGCACACAAGCACACCACTA-TCACAGGCCTTGCCACATGTGGGATGGGGACCTGCCC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73871526 466 - 130959383 tccagcactctgggaggccaaggcaggaggatcactggagcctagaagctcaaaaccagcctgggcaacaacaaaagaccctgctgcagcaaaaacaattaaataaaaaaaaaaaatagttgggcgtggtggcacacacctatagtcccagctactcggaaggctaaggtgggaggttcacttgagctgggaaggtcaaaacagcattgaaccatgattgtgccactgcattctagcccaggcaacaaagcaagaccccgtctcagaaaacaaataaaaCACGTATGTGGCAGGGAGCAATTAATATGTTTACCAAGCACATAAAGCTTCACTCAACTTAGGCAGGTCTAGGAGACATTGGTAGGAacacacac-----------------------------------tcacacactctcacacacacacacGAGCCGACTTTGCACACAAGCACACCACTACTAAGGGGCCTCGTCACATGTGGGATGGGGACCTGCCC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75432202 466 - 133195287 tccagcactctgggaggccaaggcaggaggatcactggagcctagaagctcaaaaccagcctgggcaacaacaaaagaccctgctgcagcaaaaacaattaaataaaaaaaaaaaatagttgggcgtggtggcacacacctatagtcccagctactcggaaggctaaggtgggaggttcacttgagctggggaggtcaaaacagcattgaaccatgattgtgccactgcattctagcccaggcaacaaagcaagaccccgtctcagaaaacaaataaaaCACGTATGTGGCAGGGAGCAATTAATATGTTTACCAAGCACATAAAGCTTCACTCAACTTAGGCAGGTCTAGGAGACATTGGTAGGAacacacac-----------------------------------tcacacactctcacacacacacacGAGCCGACTTTGCACACAAGCACACCACTACTAAGGGGCCTCGCCACATGTGGGATGGGGACCTGCCC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73295806 462 - 125196307 tccagcactctgggaggccaaggcaggaggatcactggagcctagaagctcaaaaccagcctgggcaacaacaaaacaccctgctgcagcaaaaaaaattaaataaaaaaaaaaaatagttgggcgtggtggcacacacctatagtcccagctactcggaaggctaaggtgggaggttcacttgagctggggaggtcaaaACAGCattgaaccatgattgtgccactgcattctagcccaggcaacaaagcaagaccccatctcaaaaaacaaataaaacacgtATGTGGCAGGGAACAATTAATATGTTTACCAAGCACATAAAGCTTCACTCAACTT----AGGTCTAGGAGACATTGGTAggaacacacac-----------------------------------tcacacactctcacacacacacacgagccgactttgcacacaagcacaccacTACTAAGGGGCCTCGCCACATGTGGGATGGGGACCTGCCC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72128510 464 - 125710982 tccagcactctgggaggccaaggcaggaggatcactggagcctagaagctcaaaaccagcctgggcaacaacaaaagaccctgctgcagcaaaaaaaaattatataaaaaaaaaaatagttgggcgtggtggcacacacctatagtcccagctactcggaaggctaaggtgggaggttcacttgagctcgggaggtcaaaacagcattgaaccatgattgtgccactgcattctagcccaggcaacaaagcaagaccccgtctcaaaaaacaaataaaaCACGTATGTGGCAGGGAACAATTAATATGTTTACCAAGCACATAAAGCTTCACTCAACTTAGGCAGGTCTAAGAGACATTGGCAGGAacacacac-----------------------------------tcacacactct--cacacacacacGAGCTGACTTTGCACACAAGCACACCACTACTAAGGGGCCTCGCCACATGTGGGATGGGGACCTGCCC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75588116 448 - 121768101 cccaacactttgggacgccacggcaggaggatcactggagcctagaagctcaagaccagcctaggcaacatagaaagaccctgctgctacaaaaa-aatt---aaaaaaaaaaaattagctgggcaaggtggcacaca-ctgtagtcccagctgctcagaaggctgag--gggaggttcacttgagctggggaggtaaaaa---cattgagccaca--tgtgccactgcattctatctcaggcaacagaacaagaccccgtctcaaa----aaataaaaCACATATGTGGCAAGGAACAATTAATGTGTTTACCAACCACAGAAAACTTTACTCAACTTGGGCAGGTCTAGGAGACAGTGGTAGGGATacacac-----------------------------------acacacacacacac-cccacacacGAGCCCACCTTGCAAACAAGCACACCACTA-TCGGGGTCCTCTCCACGTGCATGATGGGGACCTGCTC i calJac3.chr12 C 0 C 0 e canFam3.chr4 27746193 403 + 88276631 I e mm10.chr14 24192065 704 + 124902244 I a score=500013.000000 s hg38.chr10_KI270825v1_alt 95238 161 + 188315 CACAAGAA---GCCTGTGGGTCCTGCCC-------------CTGGGA-AGCATTTCTGGACATGAGGTGGGGGAAAGG-----GGACACTCAGGCAGCGCAGCCTGGACCCCCAGGAGCCA-GGG----GTGTTT--------GGGGGTGACAGCACCA--GC------ATCGGGGTAGTAATCCCAA-CCATGGGGCCTGGGCA s panTro4.chr10 76473158 161 + 133524379 CACAAGAA---GCCTGTGGGTCCTGCCC-------------CTGGGA-AGCATTTCTGGACATGAGGTGGGGGAAAGG-----GGACACTCAGGCAGCGCAGCCTGGACCCCCAGGAGCCA-GGG----GTGTTT--------GGGGGTGACAGCACCA--GC------ATCGGGGTAGTAATCCCAA-CCATGGGGCCTGGGCA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76135743 157 - 133410057 CAC---AA---GCCTGCGGGTCTTGCCC-------------CTGGGA-AGCATTTCTGGACATGAGGTGGGGGAAAGG-----GGACACTCAGGCAGTGCAGCCTGGACCCTCAGGAGCTA--GG----GTGTCT--------GGGGGTGACAGCACCA--GC------ATCGGGGTAGTAACCCCAA-CCAGGGGGCCTGGGCA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35077476 164 + 104879549 CAC---AA---GCCTACGGGTCCTGCCC-------------CTGGGA-AGCATTTCTGGACATGAGGTGGGGGAAAGG-----GGACACTCAGGCAGCGCAGCCTGGACCCCTAGAAGCTA-GGG----GTGTCT--------GCGGGTGACAGCACCA--GCATCAGGATCAGGGTAGTAACCCCAA-CCATGGGGCCTGGGCA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73871992 158 - 130959383 CAG---AA---GCCTGCGGGTCCTGCCC-------------CTGGGA-AGCATTTCTGGACGTGAAGTGGGGAAAAGG-----GGACACTCAGGCAGTGCAGCCTGGACCCCCAGGAGCTA-GGG----GTGTCT--------GGGGGTGACAGCACCA--GC------ATCGGGGTAGTAACCCCAA-CCATGGGGCCTGGGCA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75432668 158 - 133195287 CAG---AA---GCCTGCGGGTCCTGCCC-------------CTGGGA-AGCATTTCTGGACGTGAAGTGGGGAAAAGG-----GGACACTCAGGCAGTGCAGCCTGGACCCCCAGGAGCTA-GGG----GTGTCT--------GGGGGTGACAGCACCA--GC------ATCGGGGTAGTAACCCCAA-CCATGGGGCCTGGGCA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73296268 158 - 125196307 CAG---AA---GCCTGCGGGTCCTGCCC-------------CTGGAA-AGCATTTCTGGACGTGAAGTGGGGAAAAGG-----GGACACTCAGGCAGTGCAGCCTGGACCCCCAGGAGCTA-GGG----GTGTCT--------GGGGGTGACAGCACCA--GC------ATCGGGGTAGTAACCCCAA-CCATGGGGCCTGGGCA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72128974 157 - 125710982 CAG---AA---GCCCGCGGGTCCTGCCC-------------CTGGGA-AGCATTTCTGGACGTGAAGTGGGGAAAAGG-----GGACACTCAGGCAGTGCAGCCTGGACCCCCAGGAGCTA-GGG----GTGTCT--------GGGGGTGACAGCACCA--GC------ATC-GGGTAGTAACCCCAA-CCATGGGGTCTGGGCA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75588564 159 - 121768101 CAC---AA---GCCTGCGGGTCCTGCCT-------------CTGGGA-GATATTCCTGGAAGTGAGGTGGGGGCAAGG-----GGACACTCAGGCAGTACAGCCTGGACCCCCAGGAGCTAGGGG----GTGTCT--------GGTGGTGACAGCACCA--GC------ATCAGGGTAGTAACCCCAG-CCATGGGACGCAGGCA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27746596 193 + 88276631 CAT---AAGCGGCCTGCGCCCCCTCCCCTCATCCAGGGCTGCTGGGAGAGCATTTC--AAAGTGAGGGGGGCAGTGAGCATACAGCCACCTTGGCAGCATAGCACGGACCCCCGGGAGATA-AGGATGAGTGTCTAAGGGGTGAGGGGTGGTGGCGTGATGGC------ATCAGGAGAGCAGCCCTTGTCCATCAGGCCTGGGCA i canFam3.chr4 I 403 C 0 e mm10.chr14 24192065 704 + 124902244 I a score=1282686.000000 s hg38.chr10_KI270825v1_alt 95399 326 + 188315 GGGGAGACGGCGCAATTACTACCTCTTGTCAAAGGCCGTGCCATGCGTAGCAAAGGCCAGGCGCTTGCGGAGCTCGTTTCTCTCCCGGGTCATCAGCCGCAGCTGAATGGAGAGGTTCTCCACCTTCTCATTCACTTGCTGGTCAGTGAGGAGGGGTGGTGGGGACGGCGCCTTCCCGGTAGTGCCTGTGGAAGGGG-----aataataaagtgaacttgtgttcatctgg---cattca--cgaggcgcccggtgctgtcctgagctgttggcttgtgttagctattcgtga----------------------ccc-----------------aac-aagtg------ggtcctcttag----------------cattcc--------------------------cctttcacagatgag s panTro4.chr10 76473319 326 + 133524379 GGGGAGACGGCGCAATTACTACCTCTTGTCAAAGGCCGTGCCATGCGTAGCAAAGGCCAGGCGCTTGCGGAGCTCGTTTCTCTCCCGGGTCATCAGCCGCAGCTGAATGGAGAGGTTCTCCACCTTCTCATTCACTTGCCGGTCAGTGAGGAGGGGTGGTGGGGACGGCGCCTTCCCGGTAGTGCCTGCGGAAGGGG-----aataataaaatgaacttgtgttcatctgg---cattca--cgaggcgcctggtgctgttctgagctgttggcttgtgttagctattcgtga----------------------ccc-----------------aac-aagtg------ggtcctcttag----------------cattcc--------------------------cctttcacagatgag i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76135900 326 - 133410057 GGGGAGACGGCGCGATTACTACCTCTTGTCGAAGGCCGTGCCATGCGTAGCAAAGGCCAGGCGCTTGCGGAGCTCGTTCCTCTCCCGGGTCATCAGCCGCAGCTGAATGGAGAGGTTCTCCACCTTCTCATTCACTTGCCGGTCAGTGAGGAGGGGTGGTGGGGACGGCGCCTTCCCGGTAGTGCCTGTGGAAGGGG-----AATAATAAAGTGaacttgcgttcatctgg---cattca--cgaggcgcccggtgctgttctgagctgttggcttgtgttagctattcgtga----------------------ccc-----------------aat-aagtg------ggtcctcttag----------------cattcc--------------------------gctttcacagatgag i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35077640 329 + 104879549 GGGGAGACGGCGCGATTACTACCTCTTGTCGAAGGCCGTGCCGTGTGTAGCAAAGGCCAGGCGCTTGCGGAGCTCGTTCCTCTCCCGGGTCATCAGCCGCAGCTGAATGGAGAGGTTCTCCACCTTCTCGTTCACTTGCCGGTCAGTGAGGAGTGGTGGTGGGGACGGCGCCTTCCCGGTAGTGCCTGTGGAAGGGG-----aataataaagtgaacttgggttcatctgg---cattca--cgaggctcccggtgctgttctgagctgttggcttgtgttagctattcgtga-------------------cacccc-----------------aaa-aagtg------ggtcctcttag----------------cattcc--------------------------cctttcacagatgag i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73872150 329 - 130959383 GGGGAGACGGCGTGATTACTACCTCTTGTCGAAGGCCGTGCCATGTGTGGCAAAGGCCAGGCGCTTGCGGAGCTCGTTCCTCTCCCTGGTCATCAGCCGCAGCTGGATGGAGAGGTTCTCCACCTTCTCGTTCACCTGCCGGTCAGTGAGGAGGGGTGGTGGGGACGGTGCCTTCCCGGTAGTGCCTGTAGAAGGGG-----AATAATAAAGTGaacttgcattcatctgg---cattca--cgaggcgtccggtgctgttcggagctgttgtcttgtgttagctgttcgtga-------------------catccc-----------------aac-aagtg------ggtcctcttac----------------cattcc--------------------------cctttcatagatgag i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75432826 329 - 133195287 GGGGAGACGGCGTGATTACTACCTCTTGTCGAAGGCCGTGCCATGTGTGGCAAAGGCCAGGCGCTTGCGGAGCTCGTTCCTCTCCCTGGTCATCAGCCGCAGCTGGATGGAGAGGTTCTCCACCTTCTCGTTCACCTGCCGGTCAGTGAGGAGGGGTGGTGGGGACGGTGCCTTCCCGGTAGTGCCTGTAGAAGGGG-----AATAATAAAGTGaacttgcattcatctgg---cattca--cgaggcgtccggtgctgttcggagctgttgtcttgtgttagctgttcgtga-------------------cacccc-----------------aac-aagtg------ggtcctcttac----------------cattcc--------------------------cctttcatagatgag i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73296426 329 - 125196307 GGGGAGACGGCGTGATTACTACCTCTTGTCGAAGGCCGTGCCATGCGTGGCAAAGGCCAGGCGCTTGCGGAGCTCGTTCCTCTCCCTGGTCATCAGCCGCAGCTGGATGGAGAGGTTCTCCACCTTCTCGTTCACCTGCCGGTCAGTGAGGAGGGGTGGTGGGGACGGTGCCTTCCCGGTAGTGCCTGTAGAAGGGG-----AATAATAAAGTGAACTTGCATTCATCTGG---CATTCA--CAAGGCGTCTGGTGCTGTTCGGAGCTGTTGTCTTGTGTTAGCTGTTCGTGA-------------------CACCCC-----------------AAC-AAGTG------GCTCCTCTTAC----------------CATTCC--------------------------CCTTTcatagatgag i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72129131 329 - 125710982 GGGGAGACGGCGTGATTACTACCTCTTGTCGAAGGCCGTGCCATGCGTGGCAAAGGCCAGGCGCTTGCGGAGCTCGTTCCTCTCCCTGGTCATCAGCCGCAGCTGGATGGAGAGGTTCTCCACCTTCTCGTTCACCTGCCGGTCAGTGAGGAGGGGTGGTGGGGACGGCGCCTTCCCGGTAGTGCCTGTGGAAGGGG-----AATAATAAAGTGaacttgcattcatctgg---cattca--cgaggcgtccggtgctgtctggagctgttgtcttgtgttagctgttcgtga-------------------cacccc-----------------aac-aagtg------ggtcctcttac----------------cattcc--------------------------cctttcatagatgag i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75588723 330 - 121768101 GGGGAGACAGCGCAATTACTACCTCTTGTCAAAAGCCGTGCCGTGCGTGGCAAAGGCCAGGCGCTTGCGAAGCTCGTTCCTCTCCCGGGTCATGAGCCGCAGCTGGATGGAGAGGTTCTCCACCTTCTCGTTCACTTGCCGGTCAGTGAGGAGGGGTGGTGGGGACGGCGCCTTCCCGGTGGTGCCTGTGGAAGGGG----Aaataataaagtgaactcgccttcagccgg---cattca--ctaggcacccaacactgttctgagctgttgatttgccttagctatttgtgc-------------------cacccc-----------------aac-aagtg------ggtcctcttag----------------cagtcc--------------------------cctttctcaggtgag i calJac3.chr12 C 0 C 0 s mm10.chr14 24192769 409 + 124902244 GGGGAGTTGGGACAATGCCTACCTTTTGTCAAAGGTGGCTCCATGGGTGGCGAAGGCCAGGCGCTTGCGTAGCTCATTCCTCTCACGGGTCATCAGCCTTAGTTGAATGGAGAGGTTCTCCACCGTGTCATTGGCCTGCTGCTCGGTGAGGAGGGGTGGTGGGGACGGTGCCTTCCCAGTAGTCCCTGTGAGTAGGT-----AAGCACAAGGTGA-----CATGCACTCGGGCACACTCC--CAAGGTG-CCAGCACTGTTCTGACATCATGGCTTGC-CCAGCTACTCATGAACAGTAGTGAGCCCTAGGCCTTCCCACTGCGTACTGCAAGGTACC-AAGTGAGAACAGGCCCTGTCAGCTGCTGCAGGGATACCCACTCCTGCAAAAGCAGGTCTCACCTCAAGCTCTCTTCACAGATGAA i mm10.chr14 I 704 I 207 s canFam3.chr4 27746789 334 + 88276631 GGGAAGCAGGTGTGGTCACTACCTCTTATCAAAGGTCGTCCCGTGGGTCGCGAAGGCCAGGCGCTTCCGCAGTTCATTCCTCTCTCGGGTCATCAGCCGCAACTGAATGGAGAGGTTCTCCACCTTCTCATTCACCTGTCGGTCGGTGAGGAGGGGTGGCGGGGATGGCGCCTTCCCGGTGGTACCTGGCCAGGGGGACATAAATATTAAAGTGaactcacatttagatag---tactcacccaggctgccgggcactgctctgagcccctggcctgcgtcagctgcacccaa-------------------caaccc-----------------tacgaggtg------ggtcctgcagc----------------gactgc--------------------------cctt---cagatgag i canFam3.chr4 C 0 C 0 a score=285757.000000 s hg38.chr10_KI270825v1_alt 95725 99 + 188315 ----aacactgagccacagaCGGTAGCAGGTAGAACTGAAAG-TGAGTGCAGGGCATCTGGCTCCAGCATCCAAGCACTCAACAACCCCCAGTAACCACCCCAG- s panTro4.chr10 76473645 99 + 133524379 ----aacactgagccacagaCGGTAGCAGGTAGAACTGAAAG-TGAGTGCAGGGCATCTGGCTCCAGCATCCAAGCACTCAACAACCCCCAGTAACCGCCCCAG- i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76136226 99 - 133410057 ----aacactgagccacagaCGGTAGCAGGCAGAACTGAAAG-TGAGTGCAGGGCATCTGGCTCCAGCATCCAAGCACTCAACAACCCCCAGTAACCGCCCCAG- i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35077969 99 + 104879549 ----aacactgagccacagagggTAGCAGGTAGAACTGCAAA-TGAGTGCAGGGCATCTGGCTCCAGCATCCAAGCACTCAATAACCCCCAGTAACCGCCCCAG- i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73872479 98 - 130959383 ----aacactgagccggagagggCAGCAGGTAGAACTGAAAG-TGAGTGCAGGGCATCTGGCTCCAGCATCCAAGCACTCAACAA-CCCCAGTAACCACCCCAG- i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75433155 98 - 133195287 ----aacactgagccggagagggTAGCAGGTAGAACTGAAAG-TGAGTGCAGGGCATCTGGCTCCAGCATCCAAGCACTCAACAA-CCCCAGTAACCACCCCAG- i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73296755 96 - 125196307 ----aacactgagcCAGAGAGGGTAGCAGGT--AACTGAAAG-TGAGTGCAGGGCATCTGGCTCCAGCATCCAAGCACTCAACAA-CCCCAGTAACCACCCCAG- i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72129460 98 - 125710982 ----aacactgagccagagagggTAGCAGGTAGAACTGAAAG-TGAGTGCAGGGCATCTGGCTACAGCATTCAAGCACTCAACAA-CCCCAGTAACCACCCCAG- i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75589053 94 - 121768101 ----aacgctgagcc--agagggTAGCAGGTGGAACTGAAAC---AGTCCAGGCCATCTTTCTCCAGCATCCAAGCACTCAACAA-CCCCAGTAACCGCCCCAG- i calJac3.chr12 C 0 C 0 s canFam3.chr4 27747123 97 + 88276631 cccaggtcaggagtaacggggtgggggtgggagggctgagacctgagcccaggccatct-gctccagcccccaagcatc-------atccaccaccctctgctgG i canFam3.chr4 C 0 C 0 e mm10.chr14 24193178 207 + 124902244 I a score=7860.000000 s hg38.chr10_KI270825v1_alt 95824 3 + 188315 -CAA s panTro4.chr10 76473744 3 + 133524379 -CAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76136325 3 - 133410057 -CAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35078068 3 + 104879549 -CAA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73872577 3 - 130959383 -CAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75433253 3 - 133195287 -CAA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73296851 3 - 125196307 -CAA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72129558 3 - 125710982 -CAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75589147 3 - 121768101 -CAA i calJac3.chr12 C 0 C 0 s mm10.chr14 24193385 3 + 124902244 -CAA i mm10.chr14 I 207 C 0 s canFam3.chr4 27747220 3 + 88276631 CCT- i canFam3.chr4 C 0 C 0 a score=130087.000000 s hg38.chr10_KI270825v1_alt 95827 126 + 188315 GGACCCTGAAGACGCGCACTCTCTCCCCAACCTGGCTTTCACACCTCCAGGATGCGACTGTTT-TGGCCGTGATCCTTGCATCCTCCCCTG---GTTTGGAAATATCAGCTGTTACCCACCACTAAGCCT s panTro4.chr10 76473747 126 + 133524379 GGACCCTAAAGACGCGCACTCTCTCCCCAACCTGGCTTTCACACCTCCAGGATGCGACTGTTT-TGGCCGTGATCCTTGCATCCTCCCCTG---GTTTGGAAATATCAGCTGTTACCCACCACTAAGCCT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76136328 126 - 133410057 GGACCCTAAAGACGCGCACTCTCTCCCCAACCTGGCTTTCACACCTCCAGGATGCGACTGTTT-TGGCCGTGATCCTTGCATCCTCCCCTG---GTTCAGAAATACCAGCTGTTACCCACCACTAAGCCT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35078071 126 + 104879549 GGACCCTAAAGACGCACACTCTCTCCCCAACCTGGCTTTCACACCTCCAGGATGCGACTATTT-TGGCCGTGATCCTTCCATCATCCCCTG---GTTCAGAAATACCGGCTGTTACCCACCACTAAGCCC i nomLeu3.chr18 C 0 C 0 s calJac3.chr12 75589150 126 - 121768101 GGACCCTAAAGATGCCCACTCTCTCCTAAATCCGGCTTTCACACCTCCAGGATGCGACTGTTT-TGACCGTAATCTTTGCATCCTCCCGTG---CATCAGAAATGTGGGCTGTTACCCACTACTAGTCAT i calJac3.chr12 C 0 C 0 s mm10.chr14 24193388 118 + 124902244 GGACCCTGAGCATAGCCACTCTCTCCCCAGCCTGGATTTCACATCTCTAGGATGGAGTCACTTATGGCACTAATCCTTA---CCTGCCCTGAACATCTGGACATGCTC-TTATTATCCATAT-------- i mm10.chr14 C 0 C 0 s canFam3.chr4 27747223 116 + 88276631 TGA--CTGGGAACCCCCACTCTCTTCCCAGCC--ACTTTGACAGCTCCACGATGGAACCCTTT-GGGCCCTGATCTGCGCATCTTTGCCTG---GTCTGGAAACAGCAACTATCTGCAACCCCT------ i canFam3.chr4 C 0 C 0 e chlSab2.chr9 72129561 0 - 125710982 C e papAnu2.chr9 73296854 0 - 125196307 C e macFas5.chr9 75433256 0 - 133195287 C e rheMac3.chr9 73872580 0 - 130959383 C a score=1357542.000000 s hg38.chr10_KI270825v1_alt 95953 391 + 188315 GGCACATGGAGCAGGACAGACCA-ACCTGTGCCCTGAGGAGAGTGGAAGGCATGGCTCGAGGAGAAAGGCACACCTGAAATCCAATGACGCTACTAAGGACCAGGGC------------AG--------------CTGGGGCCCAAGGGCCGTGTCCCCGCCC---TCCTCGACCAGGGCTGGACAGTGCACGGCTCCCTTTTTGCAAGCCGTCCACCCGCCTGAAAGACCTG-CCCAA-CCAGCCCAGGCGTGCAGGCTAAGAGGA----------GGGCTGCTGGCTCCCAGCTGAGGTCAGTGTGACGCAATTCAAGTTGGTCCTGATGCCTCCAGGCTACTTAACCCTCACCA-GCCCTCATCAACCAC-CCTAGGACTGAGTGTCCTACA---GGGAGCCCCACACCTTATGCTCCTAGCA--GGCAACAGCCAC s panTro4.chr10 76473873 391 + 133524379 GGCACATGGAGCAGGACAGACCA-ACCTGTGCCCTGACGAGAGTGGAAGGCATGGCTCGAGGAGAAAGGCACACCTGAAATCCAATGACGCTACTAAGGACCAGGGC------------AG--------------CTGGGGCCCAAGGGCCGTGTCCCCGCCC---TCCTCGACCAGGGCTGGACAGTGCACGGCTCCCTTTTTGCAAGCCGTCCACCCGCCTGAAAGACCTG-CCCAA-CCAGCCCAGGCGTGCAGGCTAAGAGGA----------GGGCTGCTGGCTCCCAGCTGAGGTCAGTGTGACGCAATTCAAGTTGGTCCTGATGCCTCCAGGCTACTTAACCCTCACCA-GCCCTCATCACCCAC-CCTAGGACTGAGTGTCCTACA---GGGAGCCCCACACCTTATGCTCCTAGCA--GGCAACAGCCAC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76136454 391 - 133410057 GGCACATGGAGCAGGACAGACCA-ACCTGTGCCCTGAGGAGAGTGGAAGGCATGGCTCGAGGAGGAAGACACACCTGAAATCCAGTGACACTACTAAGGACCAGGGC------------AG--------------CTGGGGCCCACGGGCCGTGTCCCCGCCC---TCCTCGACCAGGGCTGGACAGTGCATGGCTCCCTTTTTGCAAGCCGTCCACCCGCCTGAAAGACCTG-CCCAA-CCAGCCCAGGCGTGCAGGCTAAGAGGA----------GGGCTGCTGGCTCCCAGCTGAGGTCAGTGTGACGCAATTCAAGTTGGTCCTGATGCCTCCAGGCTACTTAACCCTCACCA-GCCCTCATCACTCAC-CCTAGGACTGAGTGTCCTACA---GGGAGCCCCACACCTTATGCTCCTAGCA--GGCAACAGCCAC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35078197 391 + 104879549 GGCACATGGAGCAGGACAGACCA-ACCTGTGCCCTGAGGAGAGTGGAAGGCATGGCTCGAGGAGGAAGGCGCACCTGAAATCGAGTGACGCTACTAAGGACCAGGGC------------AG--------------CTGGGGCCCAAGGGCCGTGTCCCCGCCC---TCCTCGACCAGGGCTGGACACTGCATGGCTCCCTTTTTGCAAGCCGTCCACCCGCCTGACAGACCTG-CCCAA-CCAGCCCGGGCGTGCAGGCTAACAGGA----------GGGCTGCTGGCTCCCAGCTGAGGTCAGTGTGACGCAATTCAAGTTGGTCCTGATGCCTCCAGGCTACTTAACCCTCACCA-GCCCTCATCACCCAC-CCAAGGACTGAGTGTCCTACA---GGGAGCCCCACACCTTATGCTCCTAGCA--GGCAAGAGCCAC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73872580 391 - 130959383 GGCACATGGAGCAGGACAGACCA-AACTGTGCCCTGAGGAGAGTGGAAGGCACGGCTCGAGGAGGAAGGCACACCTGAAATCCAGTGACGCTATTAAGGACCAGGGC------------AG--------------CTGGGGCCCAAGGGTCATGTCCCCACCC---TCCTCAACCAGGGCTGGACACTGCACGGCTCCCTTTTTGCAAGCCATCCACCCACCTGACAGACCTG-CCCAA-CCAGCCCAGGCGTGCAGGCTAAAAGGA----------GGGCTGCTGGCTCCCAGCTTAGGTCAGTGTGACGCCATTCAAGTTGGTCCTGATGCCTCCAGGCTACTTAACCCTCACTA-GCCCTCATCACCCAC-CCTAGGACTGAGTGTCCTGCA---GGGAGCCCCACACCTTATGCTCCTAGCA--GGCAACAGCCAC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75433256 391 - 133195287 GGCACATGGAGCAGGACAGACCA-AACTGTGCCCTGAGGAGAGTGGAAGGCACAGCTCGAGGAGGAAGGCACACCTGAAATCCAGTGACGCTATTAAGGACCAGGGC------------AG--------------CTGGGGCCCAAGGGTCATGTCCCCACCC---TCCTCGACCAGGGCTGGACACTGCACGGCTCCCTTTTTGCAAGCCATCCACCCACCTGACAGACCTG-CCCAA-CCAGCCCAGGCGTGCAGGCTAAAAGGA----------GGGCTGCTGGCTCCCAGCTTAGGTCAGTGTGACGCCATTCAAGTTGGTCCTGATGCCTCCAGGCTACTTAACCCTCACTA-GCCCTCATCACCCAC-CCTAGGACTGAGTGTCCTGCA---GGGAGCCCCACACCTTATGCTCCTAGCA--GGCAACAGCCAC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73296854 391 - 125196307 GGCACATGGAGCAGGACAGACCA-AACTGTGCCCTGAGGAGAGTGGAAGGCACGGCTCGAGGAGGAAGGCACACCTGAAATCCAGTGACGCTATTAAGGACCACGGC------------AG--------------CTGGGGCCCAAGGGCCATGTCCCCGCCC---TCCTCAACCAGGGCTGGACACTGCACGGCTCCCTTTTTGCAAGCCGTCCACCCACCTGACAGACCTG-CCCAA-CCAGCCCAGGCGTGCAGGCTAAAAGGC----------GGGCTGCTGGCTCCCAGCTTAGGTCAGTGTGACGCCATTCAAGTTGGTCCTGATGCCTCCAGGCTACTTAACCCTCACTA-GCCCTCATCACCCAC-CCTAGGACTGAGTGTCCTGCA---GGGAGCCCCACATTTTATGCTCCTAGCA--GGCAACAGCCAC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72129561 391 - 125710982 GGCACATGGAGCAGGATAGACCA-AACTGTGCCCTGAGGAGAGTGGAAGGCACAGCTCGAGGAGGAAGGCACACCTGAAATCCAGTGACGCTATTAAGGACCAGGGC------------AG--------------CTGGGGCCCAAGGGCCATGTCCCCGCCC---TCCTCGACCAGGGCTGGACACTGCACAGCTCCCTTTTTGCAAGCCGTCCACCCACCTGACAGACCTG-CCCAA-CCAGCCCAGGCGTGCAGGCTAAAAGGA----------GGGCTGCTGGCTCCCAGCTTAGGTCAGTGTGACGCCATTCAAGTTGGTCCTGATACCTCCAGGCTACTTAACCCTCACTA-GCCCTTATCACCCAC-CTTAGGACTGAGTGTCCTGCA---GGGAGCCCCACACCTTATGCTCCTAGCA--GGCAACAGCCAC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75589276 391 - 121768101 GGCACATGGAGCAGGACAGACCA-ACCTGTGTCCTGAGGAGAGTGGAAGACCCGGCTCGAGGAGGAAGGCACATCTGAAATCCAGTGACGCTACTAAAGACCAGGGC------------AG--------------CTGGGGCCCAAGGGCCGTGTCCCCGCCC---TCCCTGATCAGGGCTGGACACTGAACAGCTCCC-TTTTGCAAGCCGTCCACCCTCCTGACAGACCTG-CCCAA-CCAGCCCAGGCGTACAGGCTAAGAGGA-----------GGCTGCTGGCTCCCAGCTGAGGTCAGTGTGACGCGATGCAAGCTGGTCCTGATGCCTCTGGG-TGCTTAACCCTCACCA-GCCCTCATCACCCCT-CCTAGGACTGAGCAGTCAATGCGCGGGAGCCCCACACCTTATGCTCCCAGCA--GGCAACAGCCAC i calJac3.chr12 C 0 M 227 s mm10.chr14 24193506 370 + 124902244 GACAAAGGAGTCAGGAGAGACTGCCCCCAAGCCCCAAGCAGAG-----------GCCCGAAGAAGATGGCATGT-TGGAGCAAAGTGACTACTCCAAGGAGCCCGAC------------AACTGCCCTAAGCTGTCTGGGACCCACAAGCCATATCCCCATCC---TCTCTCACCATGGCTAGACATGCAACTTAGTCCTTATTGCAGATCCACTGCC--TCTG---GACCTG-CCCAACCCAGCCTAGGCATGTTGGCTTGGAGAA-----------TGCTGACAGTTCACAGCTTA------TGTGATG-----CAGGTAAATCCTTAGGTATCTG---TGGTTAACTCACACCACACCCTCATCACCTATGCCCAAGACCGGAAG-CATATA---A--------ATGTCTTACTTTTTTACAAAGGACAACAGTCAC i mm10.chr14 C 0 C 0 s canFam3.chr4 27747339 387 + 88276631 --------GGGCACGAAGAGGCA-ACTTACGGCCTGAGCAGAACGGGATCCACAGCCTGAGGAGGAAGGGACAGGTGGGAGCCAGGGAAGCTTCTGAGGCCCAAGGCCGCTGGCTCTGAAG--------------CTGAGCCCCAAGGTCTGAGTTCCCGTCCCCGCCCCCAACCAGGGCTGAACACTACACACCTCCCTTCTC-CAACCTCTCCAAATGCCCGGAGGACCTGCCCCAG-CCAGCCCAGGCGTGTGGGCTTCGGAGAAGGCGCTCAGGGACAGCCGAC-CATGGTTAAGGTCGGTGTGACATGATGTAGGGACATCCTGGGGCTTCTG----------TCTGCCCAG-GCCCTCATCACCTATACCCAAGACTG----TCTCAAA---GGAAAGCCC-------ATGCTATAACTA--AGGAACAGTGAT i canFam3.chr4 C 0 C 0 a score=720221.000000 s hg38.chr10_KI270825v1_alt 96344 242 + 188315 CGCTGCCACCACCACCTCTGATAAGATCCAAATCCATCTCTAGG-----------AAGAAAGCACCTCATCC-------CAGGAGA-AGAGAC-TAATCCATGGTGCTTTTATATTGAACCCTGTCAATATGTCTACCTGATATCTCAATCAACCCTTAGAGACCCTTGTTGGGGTCAGAGGAGCTCACAGCAACCATC-CAATTTG-TGG-----ATGGGATCTGGCAGGCTGACTCGTGTCAGGGGACACAGTGTCTGT-TCCGCACT s panTro4.chr10 76474264 242 + 133524379 CGCTGCCACCACCACCTCTGATAAGATCCAAATCCATCTCTAGG-----------AAGAAAGCACCTCATCC-------CAGGAGA-AGAGAC-TAATCCATGGTGCTTTTATATTGAACCCTGTCAATATGTCTACCTGATATCTCAATCAACCCTTAGAGACCCTTGTTGGGGTCAGAGGAGCTCACAGCAACCATC-CAATTTG-TGG-----ATGGGATCTGGCAGGCTGACTCGTGTCAGGGGACACAGTGTCTGT-TCCGCACT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76136845 242 - 133410057 CGCTGCCACCACCACCTCTGACAAGATCCAAATCTATTTCTAGG-----------AAGAAAGCACCTCATCC-------CAGGAGA-AGAGAC-TAATCCATGGTGCTTTTATATTGAACCCTGTCAATATGTCTACCTGATATCTCAATCAACCCTTAGAGACCCTTGTTGGGGTCAGAGGAGCTCACAGCAACCATC-CAATTTG-TGG-----ATGGGATCTAGCAGGCTGACTCGTGTCAGGGGACACAGTGTCTGT-TCCGCACT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35078588 242 + 104879549 CACTGCCACCACCACCTCTGACAAGATCGAAATCCATTTCTAGG-----------AAGAAAGCACCTCATCC-------CAGGAGA-AGAGAC-TAATCCATGCTGCTTTTATATTGAACCCTGTCAATATGTCTACCTGGTATCTCAACCAACCCTTAGAGACCCTTGGTGGGGTCAGAGGAGCTCACAGCAACCATC-CAATTTA-TGG-----ATGGGATCTGGCAGGCTGACTCGTGTCAGGGGACACAGTGTTTGT-TCCACACT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73872971 241 - 130959383 CGCTGCCACCACCACCTCTGACAAGATCCAAATCCATTTCTAGG-----------AAGAAAGCACCTCATCC-------CAGGAGA-AGAGAC-TAATCCATGGTGCTTTTATATTGAACCCTGTCAATATGTCTACCTGATACCTCAACCAACCC-TAGAGACCCTTGGTGAGGTCAGAGGAGCTCACAGCAAACATC-CAATTTG-TGG-----ATGGGATCTGGCAGGCTGACTCATGTCAGGGGACACAGTGTTTGT-TCTGCAGT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75433647 241 - 133195287 CGCTGCCACCACCACCTCTGACAAGATCCAAATCCATTTCTAGG-----------AAGAAAGCACCTCATCC-------CAGGAGA-AGAGAC-TAATCCATGGTGCTTTTATATTGAACCCTGTCAATATGTCTACCTGATACCTCAACCAACCC-TAGAGACCCTTGGTGAGGTCAGAGGAGCTCACAGCAAACATC-CAATTTG-TGG-----ATGGGATCTGGCAGGCTGACTCATGTCAGGGGACACAGTGTTTGT-TCTGCAGT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73297245 241 - 125196307 CGCTGCCCCCACCACCTCTGGCAAGATCCAAATCCATTTCTAGG-----------AAGAAAGCACCTCATCC-------CAGGAGA-AGAGAC-TAATCCATGGTGCTTTTATATTGAACCCTGTCAATATGTCTACCTGATACCTCAACCAACCC-TAGAGACCCTTGGTGAGGTCAGAGGAGCTCACAGCAAACATC-CAATTTG-TGG-----ATGGGATCTGGCAGGCTGACTCGTATCAGAGGACACAGTGTTTGT-TCTGCAGT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72129952 241 - 125710982 CGCTGCCACCACCACCTCTGACAAGATCCAAATCCATTTCTAGG-----------AAGAAAGCACCTCATCC-------CGGGAGA-AGAGAC-TAATCCATGGTGCTTTTATATTGAACCCTGTCAATATGTCTACCTGGTATCTCAACCAACCC-TAGAGACCCTTGGTGAGGTCAGAGGAGCTCACAGCAAACATC-CAATTTG-TGG-----ATGGGATCTGGCAGGCTGACTCGTGTCAGGGGACACAGTGTGTGT-TCTGCAGT i chlSab2.chr9 C 0 C 0 s mm10.chr14 24193876 242 + 124902244 ---------TGCTGTCTCTAACCAGATCTAAACAGATCTGTAAGAACCCAAAGACAAAAAAATACTTCATCC-----------ATA-AGA-AT-TAGATCATGGCCCTTTTACGGTTAGCCCCATCAGCATGTCCACCTAACACCTCACCTAAGTCTTGGAGATCTGCAGTCGGTTCAGAGGAGCTCAGAGCACCGGTCTCATTTTG-TGAACGTCATGGGG---GGGGGGGTGACTCACCCCTGAGG-TGTGGCACTTGTCTCCCCAGT i mm10.chr14 C 0 C 0 s canFam3.chr4 27747726 250 + 88276631 ---CACCACTAGCACCTCTGACAAGATCTAAATCCTTTTCTAAG-----------AAGAAAGCATCTCACTCAAATGGCCAGGAGGCAGAGACAAAATCTGTGATGCTTTTATATTTAATTCTGTCCACACATTCACCTGGGATATCCGCTAACCCTCGGAGATGCTCGGCAGGGTCCCAGGAACTCACAGCAGCCATC-TCCTTTGATGG-----ACGTAACCTGGGAGGCTGATTCACCCCAGGGAGTACAGTGCCTGTCTCCCCAGC i canFam3.chr4 C 0 C 0 e calJac3.chr12 75589667 227 - 121768101 M a score=995162.000000 s hg38.chr10_KI270825v1_alt 96586 305 + 188315 GGACCCACAACGCAC-AAAGGGCATAGGACATGATA-GGTCTTCTGATTCTCTGTGCTGTCCTG--ACCA--CCCCTGTC-CCACTGATCCTTGTTGGTCAAATGTTCATGCAAACCAAGAGTCCCCCAACCCAAGACAAAAGCA------------GTGGCTTGGGGCCTTCCAGAAGGGCCAGGGAGGATAGGGAGCTC---AGGGCCAGGCATGACAAGCCAGACCACAGT--GGG-AGG--AGGATCCTCAA-CTCCCAGTGCTGTGCTTTTC--AGTCTTTTCAGGTTGTGGAACCCCAACCACTTGACTCCAGCACCCCCTGAAATGCA s panTro4.chr10 76474506 305 + 133524379 GGACCCACAACGCAC-AAAGGGCATAGGACATGATA-GGTCTTCTGATTCTCTGTGCTGTCCTG--ACCA--CCCCTGTC-CCACTGATCCTTGTTGGTCAAATGTTCATGCAAACCAAGAGTCCCCCAACCCAAGACAAAAGCA------------GTGGCTTGGGGCCTTCCAGAAGGGCCAGAGAGGATAGGGAGCTC---AGGGCCAGGCATGACAAGCCAGACCACAGT--GGG-AGG--AGGATCCTCAA-CTCCCAGTGCTGTGCTTTTC--AGTCTTTTCAGGTTGTGGAACCCCAACCACTTGACTCCAGCACCCCCTGAAATGCA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76137087 303 - 133410057 GGACCCACAACGCAC-AAAGGGCATAGGACATGATA-GGTCTTCTGACCCTCTGTGCCGTCCTG--ACCA--CCCCTGTC-CCACTGATCCTTGTTGGTCAAACGTTCATGCAAACCAAGAGTCTCCCAACCCAAGACAAAAGCA------------GTGGCTTGGGGCCTTCCAGAAGAACCAGGGAGGATAGGGAGCTC---AGGGCCAGGCATGAC-AGCCAGACCACAGT--GGG-AGG--AGGATCCTCAA-CTCCCAGTGCTGTGCTTTTC--AGTCTTTTCAGGTTGTGGAA-CCCAACCACTTGACTCCAGCACCCCCTGAAATGCA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35078830 300 + 104879549 GGACACACAATGCAC-AAAGGGCATAGGACATGACA-GGTCTTCTGACTCTCTGTGCTATCCTG--ACCA--CCCCTGTC-CCACCGATCCTTGTTGGCCAAATGTTCATGCAAACCAAGGGTCC-----CCCAAGACAAAAGCA------------GTGGCTTGGGACCTTCCAGAAGGGCCAGGGAGGATAGGGAGCTC---AGGGCCAGGCATGACAAGCCAGACCACAGT--GGG-AGG--AGGATCCTCAA-CTCCCAGTGCTGTGCTTTTC--AGTCTTTTCAGGTTGTGGAACCCTAATCACCTGACTCCAGCACCCCCTGAAACGCA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73873212 300 - 130959383 GGACCCACAACGCAC-AAAGGGCATAGGACATGACA-GGTCTTCTGACTCTCTGTGCCGTCCTG--ACCA--CCCATGTC-CCACTGATCCTTGTTGGCCAAATGTTCATGCAAACCAAGAGTCC-----CCCAAGACAAAAGCT------------GTGGCTTGGGGCCTTCCAGAAGGGCCAGGGAGGATAGGGAGCTC---AGCGCCAGGCATGACAAGCCAGACCACTGT--GGG-AGG--GGGAGCCTCAA-CTCCCAGCGCTGCACTTTTC--AGTGTTTTTTGGTTGTGGAACCCCAACCACCTGACTCCAGCATCCCCTGAAATGCA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75433888 300 - 133195287 GGACCCACAACGCAC-AAAGGGCATAGGACATGACA-GGTCTTCTGACTCTCTGTGCCGTCCTG--ACCA--CCCATGTC-CCACTGATCCTTGTTGGCCAAATGTTCATGCAAACCAAGAGTCC-----CCCAAGACAAAAGCT------------GTGGCTTGGGGCCTTCCAGAAGGGCCAGGGAGGATAGGGAGCTC---AGCGCCAGGCATGACAAGCCAGACCACTGT--GGG-AGG--GGGAGCCTCAA-CTCCCAGCGCTGCACTTTTC--AGTGTTTTTTGGTTGTGGAACCCCAACCACCTGACTCCAGCATCCCCTGAAATGCA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73297486 300 - 125196307 GGACCCACAACGCAC-AAAGGGCATAGGACATGACA-GGTCTTCTGACTCTCTGTGCCGTCCTG--ACCA--CCCATGTC-CCACTGATCCTTGTTGGCCAAATGTTCATGCAAACCAAGAGTCC-----CCCAAGACAAAAGCT------------GTGGCTTGGGGCCCTCCAGAAGGGCCAGGGAGGATAGGGAGCTC---AGCGCCAGGCATGACAAGCCAGACCACTGT--GGG-AGG--GGGAGCCTCAA-CTCCCAGCGCTGCACTTTTC--AGTGTTTTTCGGTTGTGGAACCCCAACCACCTGACTCCAGCATCCCCTGAAATGCA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72130193 300 - 125710982 GGACCCACAACGCAC-AAAGGGCACAGGACATGACA-GGTCTTCTGACTCTCTGTGCCGTCCTG--ACCA--CCCATGTC-CCACTGATCCTTGTTGGCCAAATGTTCATGCAAACCAAGAGTCC-----CCCAAGACAAAAGCT------------GTGGCTTGGGGCCTTCCAGAAGGGCCAGGGAGGATAGGGAGCTC---AGCGCCAGGCATGACAAGCCAGACCACTGT--GGG-AGG--GGGAGCCTCAA-CTCCCAGCGCTGCACTTTTC--AGTGTTTTTCGGTTGTGGAACCCCAACCACCTGACTCCAGCATCCCCTGAAATGCA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75589895 300 - 121768101 GGACCCACAATGCACAAAAGGGCATGAAGCATGACAGGGTTTTTTGACTCTCTGTGGCATCCTG--ACCA--CCCCTGTCTCCACTGATCC---TTGGCCAAATGTTCATGCAAACCAAGAGTAC-----CCCAAGACAAAAGCT------------GGGGCGTGGGGCCTTCCAGGAGGGCCAGGGAGGATGGGGAGCTC---AGCACCGGGCATGACAAGCCAGACCACAGT--GGGAAGG--GAGAGCCTCAA-CTCCCAGTGCTGTACTTTTC--AGTGTTTTCAGGTTGTGGAACCCCAACCACCTGACTCCAGCACCCCC-GAAATGCA i calJac3.chr12 M 227 C 0 s mm10.chr14 24194118 288 + 124902244 GGAACCA-GACATTC-AAAGAG-------TATGACA---TTCACCATTTATCTGTAAGGCCCTG--ACCA--AAC----C-CCTCTGATCCTTGTTATCTGATGGCTCATACAAACCAAATGTCA-----ATTAAATAAAAAGTG--------------AGCCTTGTCTCTTCCAGGGGCCCCAGGGAGGACAGGGAGTCCCATGTGGTCAGAGGTGACTGAATTTGTCATGGTTATGA-GGT--GGAAGCCTCAAGCTCTTATCCCAGGATATGTT--AGCA-TCCCAGCTGGAGATTCCCCAATCGCCTGAATCCAATA-CTCCTAAAATATA i mm10.chr14 C 0 I 327 s canFam3.chr4 27747976 301 + 88276631 AGCCCTAGAATGTGC-GGAGGGCAAGAAGCA------GGTCTTCTGA--CCCTGTGCCATCCTGACACCAGCCCCCCCTC-CAGCTGATCCTTATTGGCTGACTACTTATGCAAGCCAAGTATCC-----CCCAAAAGAAAAGATGGACACTCAGGTGTGGCCCCGCATCCTCCCGGAGTGTCAGGGAAGATGGGGACTTCTGCAGTGCTGGGG--GACGGGCTAGAAGGCGGC--GTG-AGGTAGGAGCCCCCAC-CTCTCAGTTCAGCATTCTCCCAAGTG------------GGGAGCCCAACCAC-TGAATCTAGTCCCCTCAAAAGTGCA i canFam3.chr4 C 0 C 0 a score=964.000000 s hg38.chr10_KI270825v1_alt 96891 2 + 188315 CG s panTro4.chr10 76474811 2 + 133524379 CG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76137390 2 - 133410057 CC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35079130 2 + 104879549 CG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73873512 2 - 130959383 GG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75434188 2 - 133195287 GG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73297786 2 - 125196307 GG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72130493 2 - 125710982 GG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75590195 2 - 121768101 CG i calJac3.chr12 C 0 C 0 s canFam3.chr4 27748277 2 + 88276631 TG i canFam3.chr4 C 0 I 1 e mm10.chr14 24194406 327 + 124902244 I a score=256889.000000 s hg38.chr10_KI270825v1_alt 96893 96 + 188315 Acagtcatgtgccacataacaacgtttcagtcaatgatggtggacc--acatgtaggat-gtggtcccataagattataatagagttagaaaCAAAAGA s panTro4.chr10 76474813 93 + 133524379 Acagtcatgtgccacataacgacgtttcagtcaatga---tggacc--acatgtaggac-gtggtcccataagattataatagagttagaaaCAAAAGA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76137392 93 - 133410057 Acagtcatgtgccacgtaacgatgtttcagtcaatga---tggacc--acatgtaggat-gtggtcccataagactatcatagagttagaaaCAAAAGA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35079132 93 + 104879549 Acagtcatgtgccacataacgacgtttcagtcaatga---tggacc--acatgtaggac-atggtcccataagattataatagagttagaaaCAAAAGA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73873514 91 - 130959383 Acagtcatgtgcca---aaagacgtttcagtcaatga---tggacc--acatgtaggacagtggtcccataagattataatagagttagaaaCAAAAGA i rheMac3.chr9 C 0 I 68 s macFas5.chr9 75434190 91 - 133195287 Acagtcatgtgcca---aaagacgtttcagtcaatga---tggacc--acatgtaggacagtggtcccataagattataatagagttagaaaCAAAAGA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73297788 91 - 125196307 ACAGTCATGTGCCA---AATGacgtttcagtcaatga---tggacc--acatgtaggacagtggtcccataagattataatacagttagaaacaaaaga i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72130495 91 - 125710982 Acagtcatgtgcca---aatgacgtttcagtcaatga---tggacc--acatgtaggacagtggtcccataagattataatagagttagaaaCAAAAGA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75590197 96 - 121768101 GAagttatgtgccaaataacgacatttcagtcaatga---tggacctaacatgttggatggtggtcccacaagattataatggagttagaaaaaaaaaa i calJac3.chr12 C 0 C 0 e canFam3.chr4 27748279 1 + 88276631 I e mm10.chr14 24194406 327 + 124902244 I a score=100786.000000 s hg38.chr10_KI270825v1_alt 96989 53 + 188315 AATATGTATT----------AAAAAAAAAAGATTAAATCACATCTCTAC--AAAAAATACAAAAA s panTro4.chr10 76474906 56 + 133524379 AATATGTATTT-------AAAAAAAAAAAAGATTAAATCACATCTCTAC--AAAAAATACAAAAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76137485 54 - 133410057 AATATGTATT---------AAAAAAAAAAAGATTAAATCACATCTCTAC--AAAAAATACAAAAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35079225 54 + 104879549 AATATGTATT---------AAAAGAAAAAAGATTAAATCACATCTCTAC--AAAAAATACAAAAA i nomLeu3.chr18 C 0 C 0 s macFas5.chr9 75434281 60 - 133195287 AATAAGTGTTT----AAAAAAAAAAAAAAAGATTAAACCACATCTCTAC-AAAAAAATACAAAAA i macFas5.chr9 C 0 I 2 s papAnu2.chr9 73297879 61 - 125196307 aataagtgttt----aaaaaaaaaaaaaaagattaaaccacatctctacaaaaaaaatacaaaaa i papAnu2.chr9 C 0 I 2 s chlSab2.chr9 72130586 64 - 125710982 AATAAGTGTTTaaaaaaaaaaaaaaaaaaaGATTAAACCACATCTCTAC-AAAAAAATACAAAAA i chlSab2.chr9 C 0 I 2 s calJac3.chr12 75590293 54 - 121768101 ---ataaatt-------aaaaaaaaaaaaaGATTAAACCACATCTCTAC-AAAGAAATGCAAAAA i calJac3.chr12 C 0 C 0 e canFam3.chr4 27748279 1 + 88276631 I e mm10.chr14 24194406 327 + 124902244 I e rheMac3.chr9 73873605 68 - 130959383 I a score=1214038.000000 s hg38.chr10_KI270825v1_alt 97042 423 + 188315 TTAgccaagagtggtggctcatgcctgtaatccaagcactctgggaggccaaggcagacgg-atcccttgagctcaggagtttgagaccagcctgggcaacatggcgaaaccccgtctcta-gcaaaaaataccaaaaaattagctg-----ggtgtggtggcacgtgcctagagtcacagctacttgggaggctgaggtgggaggatcgcctgagcccaggacgtcaaggctgcagtgagccgagatcacaccactgtattccagcctgggtgacaaagcaagaacttctctctaaaaaaaataaattaaaagattaccatggagatgaaaaattcctgtcacctaatgacgtcttgttgatcctgaccctctgtagccctaggctaatatatgaatatatttgtgtcttagtttttaaca-aaaaaagt--------- s panTro4.chr10 76474962 422 + 133524379 TTAgccaagagtggtggctcatgcctgtaatccaagcactctgggaggccaaggcagacag-atcccttgagctcaggagtttgagaccagcctgggcaacatggcgaaaccccgtctcta-acaaaaaataccaaaaaattagctg-----ggtgtggtggcacgtgcctagagtcacagctacttgggaggctgaggtgggaggatcgcctgagcccaggacgtcaaggctgcagtgagccgagatcacaccactgtattccagcctgggtgacaaagcaagaacttctctct-aaaaaaataaattaaaagattaccatggagatgaaaaattcctgtcacctaatgacgtcttgttgatcctgaccctctgtagccctaggctaatatatgaatatatttgtgtcttagtttttaaca-aaaaaagt--------- i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76137539 422 - 133410057 TTagccaagagtggtggctcatgcctgtaatccgtgcactctgggaggccaaggcagacgg-atcccttgagctcaggagtttgagaccagcctgggcaacatggcgaaaccccgtctcta-acaaaaaatacaaaaaaattagctg-----ggtatggtgccacatgcctagagtcacagctacttgggaggctgaggtgggaggatcgcctgagcccaggatgtcaaggctgcagtgagccgagatcacaccactgtattccagcctgggtgacagagcaagaacttctctct-aaaaaaataaattaaaagattaccatggagatgaaaaattcctgtcacctaatgacgtcttgctgatcctgaccctctgtagccctaggctaatatatgaatatatttgtgtcttagtttttaaca-aaaaaagt--------- i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35079279 417 + 104879549 TTAgccaagagtggtggctcacgcctgtaatccgagcactctgggaggccaaggcacacag-atcccttgagctcaggagtttgagaccagcctgggcaacacggcaaaaccccgtctcta-acaaaaaatacaaaaaaattagctg-----ggtgtggtggcacgtgcctagagtcacagctacttgggaggctgaggtgggaggatcgcctgagcccaggaggtcaaggctgcagtgagccgagatcacaccactgtattccagcctgggtgacagagcaagaacttctctct-aaaaaaa-----taaaagattaccatggagatgaaaaattcctgtcacctaatgacgtcttgctgatcctgaccctctgtagccctaggctgatatatgaatatatttgtgtcttagtttttaaca-aaaaaagt--------- i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73873673 404 - 130959383 TTAgccaagagtggtggctcatgcctgtaatccaagcactttgggaggccaaggcaggcag-atcccttgggctcaggagtttgagaccagcctggccaacatggcgaaacccagtctcta-acaaaaaatacaaaaaaattagctg-----ggtgtggtggcacgtgcctagagtcacagctacttgggagg------------------ctgagcccaggaggtcaaggctgcagtgagccgagatcactctactgcattccagcctgggtgacagagcaagaatttgtctct-aaaaaaataaattaaaagattacgatagaggtgaaaaattcctgtcacctaatgacgtcttgctgattctgaccctctgtagccctaggctaatatattaatgtatttgtgtcttagtttttaaca-aaaaaagt--------- i rheMac3.chr9 I 68 I 58 s macFas5.chr9 75434343 404 - 133195287 TTAgccaagagtggtggctcatgcctgtaatccaagcactttgggaggccaaggcaggcag-atcccttgggctcaggagtttgagaccagcctggccaacatggcgaaacccagtctcta-acaaaaaatacaaaaaaattagctg-----ggtgtggtggcacgtgcctagagtcacagctacttgggagg------------------ctgagcccaggaggtcaaggctgcagtgagccgagatcactctactgcattccagcctgggtgacagagcaagaatttgtctct-aaaaaaataaattaaaagattacgatagaggtgaaaaattcctgtcacctaatgacgtcttgctgattctgaccctctgtagccctaggctaatatattaatgtatttgtgtcttagtttttaaca-aaaaaagt--------- i macFas5.chr9 I 2 I 9 s papAnu2.chr9 73297942 404 - 125196307 ttagccaagagtggtggctcatgcctgtaatccaagcactttgggaggccaaggcaggcag-atcccttgagctcaggagtttgagaccagcctggccaacatggcgaaaccccgtctcta-acaaaaaatacaaaaaaattagctg-----ggtgcggtggcacgtgcctagagtcacagctacttgggagg------------------ctgagcccaggaggtcaaggctgcagtgagccgagatcactctactgcattccagcctgggtgacagagcaagaacttgtctct-aaaaaaataaattaaaagattacGATAGAGGtgaaaaattcctgtcacctaATGACGTCTTGCTGATTCTGACCCTCTGTAGCCCTAGGctaatatattaatgtatttgtgtcttagtttttaaca-aaaaaagt--------- i papAnu2.chr9 I 2 I 9 s chlSab2.chr9 72130652 404 - 125710982 TTAgccaagagtggtggctcacgcctgtaatccaagcactttgggaggccaaggcaggcgg-atcccttgagctcaggagtttgagaccagcctggccaacatggcgaaaccccgtctcta-acaaaaaatacaaaaaaattagctg-----ggtgtggtggcacgtgcctagagtcacagctacttgggagg------------------ctgagcccaggaggtcaaggctgcagtgagccgagatcactctactgcattccagcctgggtgacagagcaagaacttgtctct-aaaaaaataaattaaaagattacgacagaggtgaaaaattcctgtcacctaatgacgtcttgctgattctgaccctctgtagccctaggctaatatattaatgtatttgtgtcttagtttttaaca-aaaaaagt--------- i chlSab2.chr9 I 2 I 9 s calJac3.chr12 75590347 434 - 121768101 TTAgccaagtgtggtagctcatgcctgtaatgtgaaaactttgagaggccaaggcaagtggaaactcttgagctcaggagtttgagaccagcctgggtaacatggtgaaatcctgtctctatacaaatactacaaaaaaatgagctgggtatggtatggtggcacatacctctagtcacagctacttgggaggctgaggtgggaggatcacctgagcccaggaggtcaaggctgcaatgagctgagatcacaccactacattcctgcctgggctagacaccaagaatttgtctct-aaaaaa-----taaaaagattataatagagatgaaaagtttctgtcacctaatgacatcttgctgatcctgatcctctgtagccctaggctaatatatgaatgtatttgtgtcttagtttttaacacaaaaaagttttaaaagt i calJac3.chr12 C 0 C 0 e canFam3.chr4 27748279 1 + 88276631 I e mm10.chr14 24194406 327 + 124902244 I a score=181378.000000 s hg38.chr10_KI270825v1_alt 97465 151 + 188315 ac--------aaaaaaattaaacatttttaaaatagaaaaagcctatagaataaggatataaagaaagaaaatatt-----cagctgtacaatgtgtttgtgtgtattctttttgtgtg----tgtgtgtttttttgagacagggtcttgttgtcacccaggctggag s panTro4.chr10 76475384 155 + 133524379 ac--------gaaaaaattaaacatttttaaaatagaaaaagcctatagaataaggatataaagaaagaaaatatt-----cagctgtacaatgtgtttgtgtgtattctttttgtgtgtgtttgtttgtttttttgagacagggtcttgttgtcacccaggctggag i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76137961 152 - 133410057 ac-------aaaaaaaaattaacatttttaaaacagaaaaagcctatagaataaggatat----aaagaaaatatt-----cagctgtacaatgtgtttgtgtgtattctttctttgtgtgtttgtttgtttttttgagacagggtcttgttgtcacccaggctggag i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35079696 154 + 104879549 tttaaaagtacaaaaaagttaacagttttaaaatagaaaaagcctgtagaataaggatataaagaaagaaaatatt-----cagctgtacaat-tgtttgtgtgtattctttttt--------tgtttgtttgtttgagacagggtcttgttgtcacccaggctggag i nomLeu3.chr18 C 0 C 0 s macFas5.chr9 75434756 56 - 133195287 -------acaaaaataatttaaaattttttaaatagaaaaagcctataaaataag-------------------------------atacagtg-------------------------------------------------------------------------- i macFas5.chr9 I 9 C 0 s papAnu2.chr9 73298355 140 - 125196307 -------acaaaaataattaaaaatttttaaaatagaaaaagcctataaaataaggatataaagaaagaaaatatt-----cagctgtacaatgtgtttgtgtgtattc----------------tttttttttttgagacagggtcttgttgtcacccaggctggaa i papAnu2.chr9 I 9 C 0 s chlSab2.chr9 72131065 143 - 125710982 -------acaaaaataattaaaaattttttaaatagaaaaagcctataaaataaggataaaaagaaagaaaatatt-----cagctgtaccatgtgtttgtgtgtattcttt-------------tttttttttttgagacagggtcttgtcgtcacccaggctggaa i chlSab2.chr9 I 9 C 0 s calJac3.chr12 75590781 129 - 121768101 --------acaaaaaaattaaacatttttaaaatagaaaaagcctataggat------------aaagaaaatattttttacagctgcacaat--gtttgtgtgtattc----------------cttttttttttgacatagggtctt-tcttcccccaggctgaag i calJac3.chr12 C 0 C 0 e canFam3.chr4 27748279 1 + 88276631 I e mm10.chr14 24194406 327 + 124902244 I e rheMac3.chr9 73874077 58 - 130959383 I a score=2389597.000000 s hg38.chr10_KI270825v1_alt 97616 821 + 188315 tacagtggcgcagtctcagctcactataacctctgcctcctgggctcaagcgatcctctcacctcggcctcctaagtagctgggactacaggcatgtgccaccacacccagctaatttttttgtattttttgttagagacggggtatcgctatgttgcccaggctggtctcaaacttctgagctcaagggatctgcctgccttggcctcccaaagtggtcggattacaggcgtgagccaccacacccggcccaatgtgtttgtgttttaagctaagtgttattacaaaacagtcaaaaagttaaaaaaa----tataaagtttataaagtaaaaaagttacagtaagcaacagtttactattgaagaaggaaaaatattttctgtaagtcgaatatagcctaagtgtacagtgtttacaaagcctacagcggtgtacagtcatgttttaggccctcacattctctctc----cactcactcactgacttacccagagtaacttcaggtcctgcaagctccattcatgtaagtgccctgtacaggtggaccattttttatcttttattctgtactgttgctgcagcttttcttttctatgtatagacacacaaatacttaccattgtgttacaactggctaccgtagccagtacagtaccatgctgtacaggtttgcagctcaggagcaacaggccatatcgtgtagcctaggtatggggta-gataccatctaagtttgtgtaagcacactcatgtttacacaacaactaaattaccaaatgacaacgcatttctcagaatgtgtccctgtcattaagcaacacagactg s panTro4.chr10 76475539 821 + 133524379 tacagtggcacagtctcggctcactataacctctgcctcctgggctcaagcgatcctctcacctcagcctcctaagtagctgggactacaggcatgtgccaccacacccagctaatttttttgtattttttgttagagacggggtttcgctatgttgcccaggctggtctcaaacttctgagctcaagggatctgcctgccttggcctcccaaagtggtcggattacaggcgtgagccaccacacccggcccaatgtgtttgtgttttaagctaagtgttattacaaaacagtcaaaaagttaaaaaaa----tataaagtttataaagtaaaaaagttacagtaagctacagtttactactgaagaaagaaaaatattttctgtaagtcgaatatagcctaagtgtacagtgtttacaaagcctacagcagtgtacagtcatgttttaggccctcacattctctctc----cactcactcactgacttacccagagtaacttcaggtcctgcaagctccattcatgtaagtgccctgtacaggtggaccattttttatcttttattctgtactgttgctgcagcttttcttttctatgtatagacacacaaatacttaccattgtgttacaactggctaccgtagccagtacagtaccatgctgcacaggtttgcagctcaggagcaacaggccatatcgtgtagcctaggtatggggta-gataccatctaagtttgtgtaagcacactcatgtttacacaacaactaaattaccaaatgacaacgcatttctcagaatgtgtccctgtcattaagcaacacagactg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76138113 814 - 133410057 tacagtggcgcaatctcggctcactgtaacctctgcctcctgggctcaagtgatcctcccacctcagcctcctaagtagctgggactacaggcatgtgccaccacacccagctaatttttttgtattttttgttagagacggggtttcgccatgttgcccagcctggtctcaaacttctgagctcaaggaatctgcctgccttggcctcccaaagtggtcggattacaggcgtgagccaccacacccagcccaatgtgtttgtgttttaagctaagtgttattacaaaacagtcaaaaagttaaaaaaa-------aaa----ataaagtaaaaaagttacagtaagctacagtttactattgaagaaggaaaaatactttctgtaagtcgaatacagcctaagtgtacagtgtttacaaagcctacagcagtgtacagtcatgttttaggccctcacattctctccc----cactcactcactgactcacccagagtaacttcaggtcctgcaagctccattcatgtaagtgtcctgtacaggtggaccattttttatcttttattctgtactgttgctgcagcttttcttttctatgtatagacacacaaatacttaccattgtgttacaactggctaccgtagccagtacagtaccatgctgcacaggtttgcagctcaggagcaacaggccatatcgtgtagcctaggtatggggta-gataccatctaagtttgtgtaagcacactcatgtttacacaacgactaaattaccaaatgacaatgcatttctcagaatgtgtccctgtcattcagcaacacagactC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35079850 823 + 104879549 tacagtggtgcaatctcggctcactgtaacctctgcctcctgggctcaagcgatcctc-cacctcagcctcctaagtagctgggactacaggcatatgccaccacatccagctaatttttttgtattttttgttagagacagggtttcaccatgttgcccaggctggtctcaaacttctgagctcaagggatccgcctgccttggcctcccaaagtgctcggattacaggcgtgagccaccacacctggcccaatgtgtttgtgttttaagctaagtgttattacaaaacagtcaaaaagttaaaaaaa----tataaagtttataaagttaaaaag-tacagtaagctatactttactattgaagaaagaaaaatattttctataagtctaatatagcccaagtgtacagtgtttacacagcctacagcactgtacagtcatgttctaggcccttacattctctccccactcactcactcactgactcacccagggtaacttcaggtcctgcaagctccattcatgtaagtgccctgtacaggtggaccattttttatcttttattctgtactgttgctgcggcttttcttttctatgtatagacacacaaatacttaccattgtgttacaactgcctaccgtagccagtacagtaccatgctgcacaggtttgcagcccaggagcaacaggccatacggtgtagcctaggtatggagta-gataccatctaagtttgtgtaagcacactcatgtttacacaacgactaaattaccaaatgacaacgcatttctcagaatgtgtccctgtcattaagcaacacagactg i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73874135 815 - 130959383 tacagtggcacaatctcggctcactgcaacctctgcctcctgggctcaagcgatcctcccacctcagcctcccaagtagccgggagtacaggcatgtgccaccacgcccaactaattcttttgtac----------agacatggttttgccatgtcgcccaggctagtctcaaacttctgagctcaagggatccacctgccttgggtttccaaagtgctcggattacaggcatgagccaccacacctggcccaatgtgtttgtgttttaagctaagtgctattacaaaacagtcaaaaagttaaaaatatatatataaagtttacaaagtaaaaaagttacagcacgctatagtttactattgaagaaggaaaaatattttctataagttgaatacagcctaagtgtacagtgtttacaaagcttacagcagtgtacagtcatgtcctatgccctcacattctctcct----cactcactcactgactcacccagaacaacttcaggtcctgcaagctccattcatgtaagtgccctgtacagctggaccattttttatcttttattctgtacttttgctgcaccttttgttttctatgtatagacacacaaatacttaccattgtgttacaactgcctaccgtagccagtacagtaccatgctgcacaggtttgcagcctaagaacaacaggccatatcatgtaacctaggtatggggta-gataccatctaagtttgtgtaagcacactcatgtttacacaatgactaaattaccaaatgacaacgcatttctcagaatgtgtccctgtcattaagcaacacagattg i rheMac3.chr9 I 58 C 0 s macFas5.chr9 75434812 808 - 133195287 -------gcacaatctcggctcactgcaacctctgcctcctgggctcaagcgatcctcccacctcagcctcccaagtagccgggactacaggcatgtgccaccacgcccaactaatttttttgtac----------agacagggttttgccatgtcgcccaggctagtctcaaacttctgagctcaagggatccacctgccttgggtttccaaagtgctcggattacaggcatgagccaccacacctggcccaatgtgtttgtgttttaagctaagtgctattacaaaacagtcaaaaagttaaaaatatatatataaagtttacaaagtaaaaaagttacagcacgctatagtttactattgaagaaggaaaaatattttctataagttgaatacagcctaagtgtacagtgtttacaaagcttacagcagtgtacagtcatgtcctatgccctcacattctctcct----cactcactcactgactcacccagaacaacttcaggtcctgcaagctccattcatgtaagtgccctgtacagctggaccattttttatcttttattctgtacttttgctgcaccttttgttttctatgtatagacacacaaatacttaccattgtgttacaactgcctaccgtagccagtacagtaccatgctgcacaggtttgcagcctaggaacaacaggccatatcatgtaacctaggtatggggta-gataccatctaagtttgtgtaagcacactcatgtttacacaatgactaaattaccaaatgacaacgcatttctcagaatgtgtccctgtcattaagcaacacagattg i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73298495 816 - 125196307 tacaatggcacaatctcggctcactgcaacctctgcctcctgggctcaagcgatcctcccacctcagcctcccaagtagccgggactacagtcatgtgccaccacgcccagctaatttttttgtac----------agacagggttttgccatgtcgcccaggctagtctcaaacttctgagctcaagggatccacctgccttgggtttccaaagtgctcggattacaggcatgagccaccacacctggcccaatgtgtttgtgttttaagctaagtactattacaaaacagtcaaaaagttaaaaatatatatataaagtttataaagtaaaaaagttacagtaagctatagTTTACtattgaagaaggaaaaatattttctataagttGAATacagcctaagtgtacagtgtttacaaAGCTTACAGCAGTGTACAGTCATGTCCTATGCCTTCACAttctctcct----cactcactcactgactcacccagaacaacttcaggtcctgcaagctccattcacgTAAGTGCCCTGTACAGCTggaccattttttatcttttattctgtacTTTTGCTGCaccttttgttttctatatatagacacacaaatacttaccattgtgttacaactgcctaccgTAGCCAGTACAGTACTATGCTgcacaggtttgcagcctaggaacAACAGGCCATACCATGTAACCTAGGTATGGGGTAGGAtaccatctaagtttgtgtaagCACACTCATGTTTACACAATGACTAAATTACCAAATGACaacgcatttctcagaatgtgtccctgtcattaagcaacacaGATTG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72131208 815 - 125710982 tacagtggcaccatctcggctcactgcaacctctgcctcctgggctcaagcgatcctcccacctcagcctcccaagtagccgggactacaggcatgtgccaccacgcccagctaatttttttgtac----------agacagggttttgccatgttgcccaggctagtctcaaacttctgcgctcaagggatccacctgccttgggtttccaaagtgatcggattacaggcatgagccaccacacctggcccaatgtgtttgtgttttaagctaagtgctattacaaaacagtcaaaaagttaaaaaaatatatataaagtttataaagtaaaaaagttacagtaagctatagtttactattgaagaaggaaaaatattttctataagttgaatacagcctaagtgtacagtgtttacaaagcttacagcagtgtacagtcatgtcctatgtcctcacattctctcct----cactcactcactgactcacccagaacaacttcaggtcctgcaagctccattcatgtaagtgccctgtactgctggaccattttttatctttcattctgtacttttgctgcaccttttgttttctatgtatagacacacaaatacttaccattgtgttacaactgcctaccgtagccagtacagtaccatgctgcacaggtttgcagcctaggaacaacaggccatatcatgtaacctaggtatggggta-gataccatctaagtttgtgtaagcacactcatgtttacacaatgactaaattaccaaatgacaacgcatttctcagaatgtgtccctgtcattaagcaacacagattg i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75590910 796 - 121768101 tacagtggcacaatctcggctcactgcgacctttacctcctgggctccagtgatcctcccacctcagcctcccaagtagctgggactacaggcatgtgctgccacacccagctagtgttttcatattttatgtag-agacagggttttgccatgttgcccaggctggtctcaaactcctgagctcaagggatccacctgccttggcctcccaaagtgcttggactgcaggcatgagccaccacacctggcccaatgtgtttgtattttaagctaagtgttatttcaaaagaattaaaaagttaaaaaaa--------aagtttacaaagtaaaaaag------taagctacagtttattactgaagaaggaaagatgtcttgtataagtggaatatagcctaagtgtggagtgtttacagagtctatagtagtg--cagtcatgtcctaggccctcaccttcactccc----cactcactc--------acccagggtgacttccagtcctgcaagctccattcatggaggtgccccatacaggtggaccattttctatcttttattctgaacttttgcggcaccttttctttgcaatgtacagacacacaaatacttaccactgggttacaattgcctcccatatccagtacagtaccacgctgcacaggttcgcagcctaggggcagcaggccataccatgtagcctaggtatactgga-gataccatc----tttgtgtaagcacactcatgtttacacaacgactaaattaccaaacgaggatgcatttcttagcatgtgtccctgtcattaagcaacacaGACCA i calJac3.chr12 C 0 C 0 e canFam3.chr4 27748279 1 + 88276631 I e mm10.chr14 24194406 327 + 124902244 I a score=700055.000000 s hg38.chr10_KI270825v1_alt 98437 210 + 188315 TGTTTAAAAGCCACCAGCATCATGACAGCCAGGATTTCTCTGCTccaggccgcacctttggggtcaaaatattctttggcggtgaggccaggg------------gtcagcatttcct---ctccccaaaggggtctcctctgcagcTTC-GAAGTCTTCCCACACCTTTCCACCAAAAGACCCT-GAGCTTCACTGCTGCCCCCAGCAGTTTTGTGGGTCAGGTGG s panTro4.chr10 76476360 210 + 133524379 TGTTTAAAAGCCACCAGCACCACGACAGCCAGGATTTCTCTGCTccaggccgcacctttggggtcaaaatattctttggcggtgaggccaggg------------gtcagcatttcct---ctccccaaaggggtctcctctgcagcTTC-GAAGCCTTCCCACACCTTTCCACCAAGAGACCCT-GAGCTTCACTGCTTCCCCCAGCAGTTTTGTGGGTCAGGTGG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76138927 211 - 133410057 TGTTTAAAAGCCACCAGCACCATGACAGCCAGGATTTCTCTGCTCCAGGCCGCACCTTTGGGGTCAAAATATTATTTGGCGGTGAGGCCAGGG------------GTCAGCATTTCCT---CTCCCCAAAGGGGTCTCCTCTACAGCTTCAGAAGCCTTCCCACACCTTTCCACCAAAAGACCCT-CAGCTTCACTGCTACCCCCAGCAGTTTTGTGGGTCAGGCGG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35080673 211 + 104879549 TGTTTAAAAGCCACCAGCACCATGGCAACCAGGATTTCTGTGCTCCAGGCCACACCTTTGGGGTCAAAATATTCTTTGGAGGTGAGGCCAGGG------------GTCAGCATCTCCT---CTCCCCAAAGGGTTCTCCTCTACAGCTTCAGAAGCCTTCCCACACCTTTCCACCAAGAGACCCT-CAGTTTCACTGCTGTTCCCAGCAGTTTTGTGGGTCAGGTGG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73874950 211 - 130959383 TGTTTAAAAGCCACCAGTACCATGACAACCAGGATTTCTGTGCTCCAGGCCACACCTTTGTGGTCAAAATATTCTTTGGAGGTGAGGCCAGGG------------GTCAGCATCTCCC---CTCCCCAAAGGGGTCTCCTCTACAGCTTCAGAAGCCTTCCTACACCTTTCCGCCAAGAGACCCT-CAGCTTCACTGCTGCCCCCAACAGTTTTGCGGGTCAGGTGG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75435620 211 - 133195287 TGTTTAAAAGCCACCAGTACCATGACAACCAGGATTTCTGTGCTCCAGGCCACACCTTTGTGGTCAAAATATTCTTTGGAGGTGAGGCCAGGG------------GTCAGCATCTCCC---CTCCCCAAAGGGGTCTCCTCTACAGCTTCAGAAGCCTTCCTACACCTTTCCGCCAAGAGACCCT-CAGCTTCACTGCTGCCCCCAGCAGTTTTGCGGGTCAGGTGG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73299311 211 - 125196307 TGTTTAAAAGCCACCAGTACCATGACAACCAGGATTTCTGTGCTCCAGGCCATACCTTTGTGGTCAAAATATTCTTTGGAGGTGAGGCCAGGG------------GTCAGCATCTCCC---CTCCCCAAAGGGGTCTCCTCTACAGCTTCAGAAGTCTTCCCACACCTTTCCGCCAAGAGACCCT-CAGCTTCACTGCTGCCCCCAGCAGTTTTGCGGGTCAGGTGG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72132023 211 - 125710982 TGTTTAAAAGCCACCAGTACCATGACAACCAGGATTTCTGTGCTCCAGGCCACACCTCTGTGGTCAAAATATTCTTTGGAGGTGAGGCCAGGG------------GTCAGCATCTCCC---CTCCCCAAAGGGGTCTCCTCTACAGCTTCAGAAGCCTTCCCACACCTTTCCGCCAAGAGACCCT-CAGCTTCACTGCTGCCCCCAGCAGTTTTGTGGGTCAGATGG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75591706 208 - 121768101 TGTT---AAGCTACCAGCACCATGACAACCAAGATTTCTGTGCTCCAGGCTACACCTGTAGGGTCAAAATACTCTTTGGAGGCGAGGCCAGGG------------GTCAGCATATGCT---CTCCCCAAAGGGGTCTCCTCTACAGCTTCAGAAGCCTCCCCACACCTTTGCCTCAAGAGATCCT-CAGCTTCACTGCAGTCCCCAGCAGTATTGTGGGTCAGGCAG i calJac3.chr12 C 0 C 0 s canFam3.chr4 27748280 225 + 88276631 TATTGTAAAACCACCATGACTGTAACAACCAGGATTCCCAGGCTTCAGGCCAGGCCTCTG-GGTCAGAATGCCCTCTGACGAGGGGTCCAGGACCAGCACTGCCCACCAGTATCTCCCCCGCCCCCCACACCGTCCTACTCCACAGCCTGAGAAGCCTTCCCTCACCTTCCCCCCAAAAGACCCTGGACCCTCAGCCCTGCCCCCGG-AGTTCTGGAAAGCAGCTGG i canFam3.chr4 I 1 I 713 e mm10.chr14 24194406 327 + 124902244 I a score=105538.000000 s hg38.chr10_KI270825v1_alt 98647 34 + 188315 GTGATGGTGCTGAGTCATCTGACTGACCATAACC s panTro4.chr10 76476570 34 + 133524379 GTGATGGTGCTGAGTCATCTGACTGACCATAACC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76139138 34 - 133410057 GTGATGGTGCTGAGTCATCTGACTGACCATAACC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35080884 34 + 104879549 GTGATGGTGCTGAGTCATCTGACTGACCATAACC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73875161 34 - 130959383 GTGATGGTGCTGAGTCATCTGACTGACTATAACC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75435831 34 - 133195287 GTGATGGTGCTGAGTCATCTGACTGACTATAACC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73299522 34 - 125196307 GTGATGGTGCTGAGTCATCTGACTGACTATAACC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72132234 34 - 125710982 GTGATGGTGCTAAGTCATCTGACTGACTATAACC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75591914 34 - 121768101 GTGATGATGCTGTGTTATCTGATTCaccgtaacc i calJac3.chr12 C 0 I 581 e canFam3.chr4 27748505 713 + 88276631 I e mm10.chr14 24194406 327 + 124902244 I a score=2956750.000000 s hg38.chr10_KI270825v1_alt 98681 1040 + 188315 TACCTGACTCTCCAACAAGTGGAGCTTCCTTTGAACGTGCCTGCTACTCAACCTCTAACCAAGCCCAGGGGGAGGTTATGTTCCAggcattgatttcaccttcacaacaacctcacaagtgtgtactgataacaTCGtccccatttcacaggtgat-aaactgaggcccagcaaggttaggt-aattgactcaagtgcccagGCAGTCTGGATTCTAAACACATGCACTTCACCCTCATGCCTCGGTGCCTCCCAAATAACAACCACCAGTAGCACACAATGCAAGCCTGGCAGGTTTTGGGtttttttggt----tggttttgtttttttgagacagagtttcactcttgttgcccaggctggagtgcagtggcgcgatctcggctcaccgcaacctccacctcct-gggttcaagcgattctcctgcctctgcctaccaagtagctgggattacaggcatgcgccaccatgcccggctaattttttgtatttagtagagatggagtttcaccatgttggccaggctggtc-tcaaactcctgacttca------ggtgatccacccactcaccttggcctcccaaagtgctgggattacaggcgtgaggcactgcacccggccAtgcctggcagtttttgaaatgcttttcatacattatcccatttcgatcctcataaggtaaatatcactgttatcctcattttgcacatcaggaaacacaatcttaccaaggttaaatagtgtgtccaggtcacagagctaTGGAATATGGAATATGGACCTCTAAATGATCCTAGAACCCAAGGTATTAACCTCAAAACTTGcacatttttggatcttaggacctctgtacttatctggcactccaaagagctcttgttcacagatgttatgtctaataaaatttacaagattagaaattaaaaccaag-aagaatttttaaatatttacttattttttaaaaaatcaaaactccattatatattgacataaga-ttttttatgagacattaaccaccctttccattacaaaacaaagcaatgcggcagg s panTro4.chr10 76476604 1043 + 133524379 TACCTGACTCTCCAACAAGTGGAGCTTCCTTTGAACGTGCCTGCTACTCAACCTCTAACCAAGCCCAGGGGGAGGTTATGttccaggcattgatttcaccttcacaacaacctcacaagtgtgtactgataacatcgtccccatttcacaggtgat-aaactgaggcccagcaaggttaggt-aattgactcaagTGCCCAGGCAGTCTGGATTCTAAACACATGCACTTCACCCTCATGCCTCGCTGCCTCCCAAATAACAACCACCAGTAGCACACAATGCAAGCCTGGCAGGTTTTGGGtttttttgtt----tggttttgtttttttgagacagagtttcactcttgttgcccaggctggagtgcagtggcgcgatctcggctcaccgcaacctccacctcct-gggttcaagcgattgtcctgcctcagcctaccaagtagctgggattataggcatgcgccaccatgcccggctaattttttgtatttagtagagatggaatttcaccatgttggccaggctggtc-tcaaactcctgacctcaggagtgggtgatccacccattcaccttggcctcccaaaatgctgggattacaggcgtgaggcaccgcacccggccAtgcctggcagtttttgaaatgcttttcatacattatcccatttcgagcctcataaggtagatatcactgttatcctcattttgcacatcaggaaacacaatcttaccaaggttaaatagtgtgtccaggtcacagagctaTGGAATATGGAATATGGACCTCTAAATGATCCTAGAACCCAAGGTATTAACCTCAAAACTTGcacatttttggatcttaggacctctgtacttatctggcactccaaagagctcttgttcacagacgttatgtctaataaaatttacaagattagaaattaaaaccaag-aagaatttttaaatatt---ttattttttaaaaaatcaaaactccattatatattgacataaga-ttttttatgagacattaaccaccctttccattacaaaacaaagcaatgcggcagg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76139172 1033 - 133410057 TACTTGATTCTCCAACAACTGGAGCTTCCTTTGAACGTGCCTGCTACTCAACCTCTAACCAAGCCCAGGGGGAGGTTATGttccaggcattgatttcaccttcaaaacaacctcacaagtgtgtactgataacatcgtccccatttcacaggtgat-aaactgaggcccagcaaggttaggtaaattgactcaagTGCCCAGGCAGTCTGGATTCGAAACACATGCACTTCACCCTCATACCTGGGTGCCTCCCAAATAACAACCATCAGTAGCACGCAATGCAAGCCTGGCAGGTTTTGGttttttttgtt----ttgttttgtttttttgagacagagtttcactcttgttgcccaagctggagtgcagtggcgcgatctcagctcaccgcaacctccacctcct-gggttcaagc----ctcctgcctcagcctaccaagtagctgggattacaggcatgcaccaccatgccgggctaattttttgtatttagtagagacggagtttcaccatgttggccaggctggtcttcaaactcctgacctca------ggtgacccacccactcaccttggcctcccaaagtgctgggattacaggcgtgaggcaccacacccggccAtgcctggcagtttttgaaatgcttttcatacattatccca-ttcgatcctcataaggtaggtatcactgttatcctcattttgcacatcaggaaacacaatcttaccaaggttaaatagtgtgtccaggtcacagagctaTGGAATATGGAATATGGTCCTCTAAATGATCCTAGAACCCAAGGTATTAACCTCAAAGCTTGcacatttttggatcttagaacctctgtacttatctggcactccaaagagctcttgttcacagacgttatgtctaataaaatttacaagattagaaattaaaaccaag-aagaatttttaaatat----ttattttttaaaaaatcaaaactccattatatattgacataaga-ttttttatgagacattaaccactctttccattgcaaaacaaagcaatgcagcagg i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35080918 1032 + 104879549 TACCTGACTCTCCAACAAGTGAAGCTTCCTTCGAACCTGCCTGCTACTCAACCTCTAACCAAGCCCAGGGGGAGGTTATAttccaggcattgatttcaccttcacaacaatctcacaagtgtgtactgataacatcgtccccatttcacaggtgat-aaactgaggcccagcaaggttaggt-aattgactcaagTGCCCAGGCAGTCTGGATTCGAAGCACATGCACTTCACCCTCACGCCTCACTGCCTCCCAAATAACAACCATCAGTAGCACGCAATGCAAGCCTGGCAGGtttt---tatttttgtt----ttgttttgtttttttgagacagagtttcactcttgttgcccaggctggagtgcagtggtgcaatctcggctcaccgcaacctccacctcct-gggttcaagcgattctcctgcctcagcctaccaagtagctgggattacaggcatgcgccaccatgcccggctaattttttgtatttagtagagacggagtttcaccatgttggccaggctggtc-tcaaactcctgacctca------ggtgatccacccacccacctcggcctcccaaagtgctgggattacagaagtgaggcaccgcacccagccAtgcgtggcggtttttgaaatgcttttcatacattatccca-ttcgatcctcataaggtagatatcactgttatcctcattttgcacatcaggaaacacaaccttaccaaggttaaatagtgtgtccgggtcacagagctatggaatatggaatataaacctctaaatggtcctagaacccaaggcattaacctcaaagctTGcacatttttggatcttaggacctctgtacttatctggcactccaaagagcttttgttcacagacgttatgtctaataaaatttacaagattagaaattaaaaccaag-aagaatttttaaatat----ttattttttaaaaaatcaaaactccattatatattcacataaga-ttttttatgagacattaaccaccctttccattacaaaacaaagcaatgcggcagg i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73875195 1029 - 130959383 TACCTGACTCTCCAACAAGTGGGGCTTCCTTTGAATGTGCCTGCTACTCAACCTCTAACCAAGCCCAGGGGGAGGTTATGTTCCAAGCattgatttcaccgttgcaacaacctcacaggtgtgtactgataacatcatccccatttcacaggtgag-aaactgaggcccagcaaggttaggt-cgttgactcaagTGCCCAGGCAGTCTGGATTTGAAGCACATGTGCTTCACCCTCATGCCTTGCTGCCTCCCAAATAACAACCATCAGTAACATGCACTTCAAGCCTGGCAGGTTTTGTtttttgttgttgttctgtttttgtttttttgagacagagtttcactcttgttgcccaggctggagtgcagtggtgcaatctcgactcactgcaacctccacctcct-gggttcaagcgattctcctgcctcagcctccagagtagttgggattacaggcatgtgccaccatgcccagctgattttttatatttagtagagatggagtttcaccacgttggccaggctggtc-tcaaactcctgacctca------ggtgatccgcc----cacctcagccttccaaagtgctgggattaca---gtgaggcaccacacccggccAtgcctggcagtttttgaaatgcttttcatacattatcccg-ttcaatcctcataaggtagatatcactgttatcctcattttgcacatcgggaaacacaagcttaccaaggttaaatagtgtgtccaggtcacagaggtaTGGAATATGGA-------CCTCTAAATGATCCTAGAAACCAAGGTATTAACCTCAAAGCTTGcacatttttggatcttaggaccgctatatttatctgacactctgaagagcttttgttcatagacgttatgtctaataaaatttacaagattagaaatcaaaaccaag-aagaatttttaaatatttacttattttttaaaaagtcaaaactccattgtatattcacataaga-ttttttatgggacattaaccaccctttccattacaaaacaaaacaatgcggcagg i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75435865 1029 - 133195287 TACCTGACTCTCCAACAAGTGGGGCTTCCTTTGAATGTGCCTGCTACTCAACCTCTAACCAAGCCCAGGGGGAGGTTATGTTCCAAGCattgatttcaccgtcgcaacaacctcacaggtgtgtactgataacatcatccccatttcacaggtgag-aaactgaggcccagcaaggttaggt-cgttgactcaagTGCCCAGGCAGTCTGGATTTGAAGCACATGTGCTTCACCCTCATGCCTTGCTGCCTCCCAAATAACAACCATCAGTAACATGCACTTCAAGCCTGGCAGGTTTTGTtttttgttgttgttctgtttttgtttttttgagacagagtttcactcttgttgcccaggctggagtgcagtggtgcaatctcgactcactgcaacctccacctcct-gggttcaagcgattctcctgcctcagcctccagagtagttgggattacaggcatgtgccaccatgcccagctgattttttgtatttagtagagatggagtttcaccatgttggccaggctggtc-tcaaactcctgacctca------ggtgatccgcc----cacctcagccttccaaagtgctgggattaca---gtgaggcaccacacccggccAtgcctggcagtttttgaaatgcttttcatacattatcccg-ttcaatcctcataaggtagatatcactgttatcatcattttgcacatcgggaaacacaagcttaccaaggttaaatagtgtgtccaggtcacagaggtaTGGAATATGGA-------CCTCTAAATGATCCTAGAAACCAAGGTATTAACCTCAAAGCTTGcacatttttggatcttaggaccgctatatttatctgacactctaaagagcttttgttcatagacgttatgtctaataaaatttacaagattagaaatcaaaaccaag-aagaatttttaaatatttacttattttttaaaaagtcaaaactccattgtatattcacataaga-ttttttatgggacattaaccaccctttccattacaaaacaaaacaatgcggcagg i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73299556 1029 - 125196307 TATCTGACTCTCCAACAAGTGGAGCTTCCTTTGAATGTGCCTGCTACTCAACCTCTAACCAAGCCCAGGGGGAGGTTATGTTCCAAGCATTGATTTCACCGTCGCAACAACCTCACAGGTGTGTACTGATAacatcatccccatttcacaggtgag-aaactgaggcccagcaaggTTAGGT-CATTGACTCAAGTGCCCAGACAGTCTGGATTTGAAGCACATGTGCATCACCCTCATGCCTTGCTGCCTCCCAAATAACAACCATCAGTAACATGCACTTCAAGCCtggcaggttttgttttttgttgttgttctgtttttgtttttttgagacagagtttcactcttgttgcccaggctggagtgcagtggtgcaatctcggctcactgtaacctctacctcct-gggttcaagcgattctcctgcctcagcctccagagtagctgggattacaggcatgtgccaccatgcccggctgattttttgtatttagtagagatggagtttcaccatgttggccaggctggtc-tcaaactcctgacctca------ggtgatccgcc----cacctcagccttccaaagtgctgggattaca---gtgaggcaccacacccggccatgcCTGGCAGTTTTTGAAATGCTTTTCATACATTACCCTG-TTCAATCCTCATAAGGTAGATATCactgttatcctcattttgcacATCGGGAAACACAAGCTTACCAAGGTTAAATAGTGTGTCCAGGTCACAGAGGTATGGAATATGGA-------CCTCTAAATGATCCTAGAAACCAAGGTATTAACCTCAAAGCTTGCACATTTTTGGATCTTAGGACCGCTATATTTATCTGACACTCTACAGAGCTTTTGTTCATAGATGTTATGTCCAATAAAATTTACAAGATTAGAAATCAAAAccaag-aagaatttttaaatatttacttattttttaaaaagtcaaaactccATTGTATATTCACATAAGA-TTTTTTATGGGACATTAACCACCCTTTccattacaaaacaaaacaatgcggCAGG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72132268 1026 - 125710982 TACCTGACTCTCCAATAAGTGGAGCTTCCTTTGAATGTGCCTGCTACTCAACCTCTAACCAAGCCCAGGGGGAGGTTATGTTCCAAGCattgatttcaccgtcgcaacaacctcacaggtgtgtactgataatatcatccccatttcacaggtgag-aaactgaggcccaccaaggttaggt-cgttgactcaagTGCCCAGGCAGTCTGGATTTGAAGCACATGTGCTTCACCCTCATGCCTTGCTGCCTCCCAAATAACAACCATCAGTAACATGCACTTCAAGCCTGGCAGGTTTTGTtttttgttgttgttctgtttttgtttttttgagacagagtttcactcttgttgcccaggctggagtgcagtagtgcaatctcggctcactgcaacctccacctcct-gggttcaagtgattctcctgcctcagcctccagagtagctgggattacaggcatgtgccaccatgcccggctgattttttgtatttagtagagatggagtttcaccatgttggccaggctggtc-tcaaactcctgacctca------ggtgatccacc----cacctcagccttccaaagtgctgggattaca---gtgaggcaccacacccggccAtgcctggcagtttttgaaatgcttttcatacattatcctg-ttcactcctcataaggtagatatcactgttatcctcattttgcacatcgggaaacacaagcttaccaaggtttaacagtgtgtccaggtcacagaggtaTGGAATATGGA-------CCTCTAAATGATCCTAGAAACCAAGGTATTAACCTCAAAGCTTGcatatttttggatcttaggaccgctatatt----tgacactctaaagagcttttgttcatagacgttatgtctaataaaatttacaagattagaaatcaaaaccaag-aagaatttttaaatatttacttattttttaaaaagtcaaaactccattgtatattcacataagatttttttatgggacattaaccaccctttccattacaaaacaaaacaatgcggcagg i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75592529 961 - 121768101 TACCTGACTCTCCGACAAGTGGAGCATCCTTTGAACACGCCTGCTACTCATCCTCTAACTAAGCCCAGGGGGGAGTTACAttccaagcattgatttcaccggcacaacaaccttgcaggtgtatactaatagcatcatccccatttcacaggtgagaaaactgaggtccagcaaggttaggt-gattgactcaagTACCTAGGCAGCCTGGATTCGGAGCACACATGCTTCACCCTCATGCCTCGCTGCCTCTCAAGTAACAACCATTAGTAGCATGC-------------------------------------------------CCtttagacagagttttgctcttgtcacccaggctggagtgcaatggcacaatctaggctcactgcaacctctgcttcccaggattcaagcgattctcctgcctcaacctcctaagcagctggggttacagaaatgcgccaccatgtccggctaattttttgtatttagtagagacggggtttcaccatgttggccaggctggtc-tcaaactccggatgtca------ggtgacccgcc----aacctcggcctcccaaagttctgggattacgggcatgagccaccacacccagccAtgcctggcagtttttgaaatgcttttcatacattatccca-ttc-atcctcataaggtagacttcgccataatcctcatttttcacatcaggaaacacaatcttatcaaggttaaagagtgtgtctagatcacagagctaTGGAATATGGAATACGGGCCTCTAAATGATCCTAGAACTCAATGTATTA----------------------------TCAGACCTCTGTACTTACCTGGCactccaaagagcttttattcatagatgttatgtctaataaaatttacaagattagaaattaaaaccaagaaagaatttttagatatttacttatttttttaaaaatcaaaactctattataaattcacttaaga-ttttttatgagccattaaccaccctttctattataaaacaaaac---gcagcagg i calJac3.chr12 I 581 C 0 e canFam3.chr4 27748505 713 + 88276631 I e mm10.chr14 24194406 327 + 124902244 I a score=1580584.000000 s hg38.chr10_KI270825v1_alt 99721 486 + 188315 aacagcatcattgctttgcattttgttacacaggctgtttaacatccagcttcacagagacagctggagtctcatctc--tgtaa------tgtcacacacccaggatggaatctttagaaaactagactctaca------cccatgtgaggatggaagcagaaaagaccagtgacatcctagtatcattatgaaaacag-tctcacctcacgagccctctgaaaggacctcagggacatca----ggccacactttcagaatggctATTCTATGCTATAGTCAAGTTCAAGAAATAGCAGAGAAACATCAAATGTCCAGTTTCACAACAGAAAAGCACCACCAGGCCCAGTAACCTGCCTTTGGGGAGACAAGAAATTTTGAATTTTCATCCCCATTGTATAAACGAGGCAACATAAAGATGCA-----GCCCTGGCTTTCAAAGAAGCTGGA---GAGAGGAGAGGAGGCGGCAGGACAGAAGGAGGGGC--TCAGAGCCATCCCAACACACC s panTro4.chr10 76477647 488 + 133524379 aacagcatcattgccttgcattttgttacacaggctgtttaacatccagcttcacagagacagctggagtctcatctctgtgtaa------tgtcacacacccaggatggaacctttagaaaactagactctaca------cccatgtgaggatggaagcagaaaagaccagtgacatcctagtatcattatgaaaacag-tctcacctcacgagccctctgaaaggacctcagggacatca----ggccacactttcagaatggctATTCTATGCTATAGTCAAGTTCAAGAAATAGCAGAGAAACATCAAATGTCCAGTTTCACAACAGAAAAGCACCACCAGGCCCAGTAACCTGCCTTTGGGGAGACAAGAAATTTTGAATTTTCATCCCCATTGTGTAAACGAGGCAACATAAAGATGCA-----GCCCTGGCTTTCAAAGAAGCTGGA---GAGAGGAGAGGAGGCGGCAGGACAGAAGGAGGGGC--CCAGAGCCATCCCAACACACC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76140205 485 - 133410057 aacagcgtcattgctttgcattttgttacacaggctgtttaacatccagcttcac---tacagctggagtctcatctctgtgtaa------tgtcacacacccaggatggaacctttagaaaactagactctata------cccatgtgaggatgggagcataaaagaccagtgacatcctagtatcattatgaaaacag-tctcacctcacgagccctctgaaaggacctcagggacatca----ggtcacactttcagaatggctATTCTATGCTATAGTCAAGTTCAAGAAATAGCAGAGAAACACCAAATGTCCAGTTTCACAACAGAAAAGTACCACCAGCCCCAGTAACCTGCCTCTGGGGAGACAAGAAATCTTGAATTTTCATCCCCATTGTGTAAACGAGGCAACATAAAGATGCA-----GCCCTGGCTTTCAAGGAAGCTGGA---GAGAGGAGAGGAGGCGGCAGGACAGAAGGAGGGGC--TCAGAGCCATCCCAACACACC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35081950 488 + 104879549 aacagcatcattgctttgcattttgttacacagggtgtttaacatccggcttcacggagacagctggagtctcatctctgtgtaa------tatcacacaccgaggatggaacctttagaaaactagactccaaa------cccatgtgaggatgggagcataaaagatcagtgacaacctagtatcattatgaaaacag-tctcacctcacaagccctctgaaaggacctcagggacatcg----ggccacactttcagaatggctATTCCACGCTATAGTCAAGTTCAAGAAATAGCAGAGAAACATCAAATGTCCAGTTTCACAACAGAAAAGCACCACCAGGCCCAGTAACCTGCCTTTGGGGAGACAAGAAATTTTGAATTTTCATCCCCATTGTGTAAACGAGGCAACATAAAGATGCA-----GCCCTGGCTTTCGAGGAAGCTGGA---GAGACGAGAGGAGGCGGCAGGACAGAAGGAGGGGC--TCAGAGCCATCCCAACACATC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73876224 487 - 130959383 aagagtgccattgctttgcattttgttacacaggctgtttaacatccagcttcacagagacagctagagtctcatctctgtgtaa------tgtcacacacccaggatggaacctttagaaaactggactctaca------cccatgtgaggatgagaacataaaagaccagtggcctcctagtatcattatgaaaacag-tctcacctcacgagccctctgaaaggacctcagggacatta----ggccacactttcagaatggctATTATATGCTATAATCAAGTTCAAGAAATAGTAGAGAAACATCAAATGTTCAGTTTCACAACAGAAAAGCATCATCAGGCCCAGTAACCTGCCTTTGGGAAGATAAGAAATTTTGAA-TTTCATCCCCATTTTGTAAATGAGGCAACAGAAAGATGCA-----GCCCTGACTTTCGAGGAAGCTGGA---GAGAGGAGAGGAGGCGGCAGGACAGAAGGAAGGGC--TCAGAACCATCCCAACGCTTC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75436894 487 - 133195287 aagagtgccattgctttgcattttgttacacaggctgtttaacatccagcttcacagagacagctagagtctcatctctgtgtaa------tgtcacacacccaggatggaacctttagaaaactggactctaca------cccatgtgaggatgagaacataaaagaccagtggcctcctagtatcattatgaaaacag-tctcacctcacgagccctctgaaaggacctcagggacatta----ggccacactttcagaatggctATTATATGCTATAATCAAGTTCAAGAAATAGTAGAGAAACATCAAATGTTCAGTTTCACAACAGAAAAGCATCATCAGGCCCAGTAACCTGCCTTTGGGAAGATAAGAAATTTTGAA-TTTCATCCCCATTTTGTAAATGAGGCAACAGAAAGATGCA-----GCCCTGACTTTCgaggaagctgga---gagaggagaggaggcggcaggacagaaggaAGGGC--TCAGAACCAGCCCAACGCTTC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73300585 487 - 125196307 AAGAGTGTCATTGCTTTGCATTTTGTTACACAGGCTGTTTAACATCCAGCTTCACAGAGACAGCCAGAGTCTCATCTCTGTGTAA------TGTCACACACCCAGGATGGAACCTTTAGAAAACTGGACTCTACA------CCCATGTGAGGATGAGAACATAAAAGACCAGTGGCATCCTAGTATCATTATGAAAACAG-TCTCACCTCACGAGCCCTCTGAAAGGACCTCAGGGACATTA----GGCCACActttcagaatggctattatatgCTAGAATCAAGTTCAAGAAATGGTAGAGAAACATCAAATGTTCAGTTTCACAACAGAAAAGCATCATCAGGCCCAGTAACCTGCCTTTGGGAAGATAAGAAATTTTGCA-TTTCATCCCCATTTTGTAAACGAGGCAACAGAAAGATGCA-----GCCCTGACTTTCGAGGAagctgga---gagaggagaggaggcagcAGGACAGAAGGAAGGGC--TCAGAACCATCCCAACGCTTC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72133294 487 - 125710982 aagagtgtcattgctttgcattttgttacacaggctgtttaacatccagcttcacagagacaggtggagtctcatctctgtgtaa------tgtcacacacccaggatagaacctttagaaaactggactctaca------cccatgtgaggatgagaacataaaagaccagtggcatcctagtatcattatgaaaacag-tctcacctcacgagccctctgaaaggacctcagggacatca----ggccacactttcagaatggctATTATATGCTATAATCAAGTTCAAGAAATAGTAGAGAAACATCAAATGTTCAGTTTCACAACAGAAAAGCACCATCAGGCCCAGTAACCTGCCTTTGGGAAGATAAGAAATTTTGCA-TTTCATCCCCATTTTGTAAATGAGGCAACAGAAAGATGCA-----GCCCTGACTTTCAAGGAAGCTGGA---GAGAGGAGAGGAGGCGGCAGGACAGAAGGAAGGGC--TCAGAACCATCCCAACGCTTC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75593490 477 - 121768101 aagagtgacattgctttgcattttgtcatgcaggctgtttaacgtcctgcttcacagagacagctggagcctcatctctgtgtaatgtcactgtcacacacccaggatggaacctttggaaaactccactctaca-------ccatgtgaggaggagcgtataaaagaccagtgacat-------------------cag-tctcacctcgagagccctctgaaaggacctcagggacatca----agccacactttgagaatggctATTCTATGCTATAATCAAGTTCAAGAAATAGCAGAAAAACATCAAATGACCAGTTTCACAACAGAAAAGCACCACCAGGCCCCGCAACCTGCCTTTGGGGAGATAAAAAATTTTGAATTTTCACCTGCATTTTGTAAACGAGGCAACAGAAAGTTGCA-----GCCCTGGCTTTTGAGGAAGCCAGAGAGGAGAGGAGAGGAGGTGGCAGGACAGAAGGAGGGGC--TCAGAGCTAACCCAACACATC i calJac3.chr12 C 0 C 0 s canFam3.chr4 27749218 466 + 88276631 aaaagtggcatcactttgcatct--ttaca-atgctg-ttgacttctggcttaagagagatagctagagtctccac-ctgtgcag------catcacacatgatgggt-gaacctgtagaaaagtctgctctacagcaaagtctgtgagaggatgatagtggaaaaggcaagcggcatctcagtatcattatgataacagctttgacctcaccagccccctgaaagggcctcagggacagcacgtgagccgtgctttgagagcAGGTGCTCT-TGCTATAATCAAGCCC-AGAAGTATTACAGAAACATCAGCTTGAGAGTTTCAGAAATGAAAAGCACCACCAG---------------------------AGAAA----GAA-TTTTCCCCCTATTTTGCGAACAAGGCAACAGGAAGATGCATCCGTTCCTTGGCTGTTAAGGAAGCTGAA---GGGAGAAGGAGAAGGAGCAGGACAGAAACTGGGCTCATCAGATCTGTCACCACACACA i canFam3.chr4 I 713 C 0 e mm10.chr14 24194406 327 + 124902244 I a score=1797208.000000 s hg38.chr10_KI270825v1_alt 100207 568 + 188315 -CCA--TCTCTGTCTCCAGA------CGTCT--CAG---------------TCTACAGCCATGAGGACCTGGGCGTGGCTGGC---CACAC-AGATAAagt-agcaacgacatgtgccaagcactgcccaagcactggg-ttctgtgctaaagacactctaccttcaactcattaatctccacagctccctactggggttgtgctaggattgctccTTGAGAAAC--ACGT-CAGAAAGACTACATGGCTAGGAAAATGG-GATTCCCATGCACACTCAGCTCTGACGCCAAAGCCAAC----ACCTCAACCA-CTCCACAACAATGCCTCCTAATAGGGAAGGATTCTC-----------GTTCCACTTCT----------------------CTTGGCCCAAAGGCTTGAGCATACAGGACACATACAGAAAGTAAGGTCAACCAGACCCAAGA-TCCATCACACATCAGGCTCTCAGACCCAGCAGAAAGTGCAGCCGATGCCTCCGGCCTTTTGTAATTGGGGGATGGGGAGGGCCAAGGAGGGCCACAGGGGACCTCATGACCAATCTCAAGA----TGTGCTACGCCCAGAAGTTCCAAAAGAACAGCAAGGGTTGCAGAAAATCCTCTCAATCCCCATTC----------------------------------------------------------------------------- s panTro4.chr10 76478135 561 + 133524379 -CCA--TCTCTGTCTCCAGA------CGTCT--CAG---------------TCTATAGCCATGAGGACCTGGGGGTGGCTGGC---CACAC-AGATAAAGT-AGCAATGacatgtgccaagcactgcccaagcactggg-ttctgtgctaaagacactctaccttcaactcattaatcttcacagctccctactggggttgtgctagga-------ttGAGAAAC--ACGT-CAGAAAGACTACATGGCTAGGAAAATGG-GATTCCCATGCACACTCAGCTCTGACGCCAGAGCCAAC----ACCTCAACCA-CTCCACAACAATGCCTCCTAATAGGGAAGGATTCTT-----------GTTCCACTTCT----------------------CTTGGCCCAAAGGCTTGAGCATACAGGACACATACAGAAAGTAAGGTCAACCAGACCCAAGA-TCCATCACACACCAGGCTCTCAGACCCAGCAGAAAGTGCAGCCGATGCCTCCGGCCTTTTGTAATTGGGGGATGGGGAGGGCCAAGGAGGGCCACAGGGGACCTCATGACCAATCTCAAGA----TGTGCTACGCCCAGAAGTTCCAAAAGAACAGCAAGGGTTGCAGAAAATCCTCTCAATCCCCATTC----------------------------------------------------------------------------- i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76140690 565 - 133410057 -CCA--TCTCTGTCTCCAGA------CGTCT--CAG---------------TCTACAGGCATGAGGACCTGGGGGTGGCTGGC---CACAC-AGATAAAGT-AGCAATGACATGTGCCAAGCACTGCCCAAGCACTGGG-TTCTGTGCTAAAGACACTCTACCTTCAACTCATTATTCTCCGCAGCTCCCTACTGGGGTTGTGCTAGGATTGC---TCGAGAAAC--ACGT-CAGAAAGACTACATGGCTAGGAAAATGG-GATTCCCATGCACACTCAGCTCTGACACCAGAGCCAAC----ACCTCAACCA-CTCCACAACAATGCCTCCTAATAGGGAAGGATTCTT-----------GTTCCACTTCT----------------------CCTGGCCCAAAGGCTTGAGCATACAGGACACATACAGAAAGTAAGGTCAACCAGACCCAAGA-TCCATCACACAGCAGGCTCTCTGACCCAGGAGAAAGTGCAGCCGATGCCTCCGGCCTTTTGTAATTGGGGGATGGGGAGAGCCAAGGAGGGCCACAGGGGACCTCACGACCAATCTCAAGA----TGTGCTACGCCCAGAAGTTCCAAAAGAACAGCAAGGGTTGCAGAAAATCCTCTCAATCCCCTTTC----------------------------------------------------------------------------- i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35082438 568 + 104879549 -CCA--TCTCTGTATCCAGA------CGTCT--CAG---------------TCTACAGCCATGAGGACCTGGGGGTGGCTGGC---CACAC-AGATAAAGT-AGCAATGACATGTGCCAAGCACTGCCCAAGCACTGGG-TTCTGTGCTAAAGACACTCCACCTTCAACTCATTAATCTCCACAGCTCCCTACTGGGGTTGTGCTAGGATCGCTCTTTGAGAAAC--ATGT-CAGAAAGACTATATGGCTAGGAAAATGG-GATTCCCATGCACATTCGGCTCTGACGCCAGAGCCAAC----ACCTCAACCA-CTCTACAACGATGCCTCCTAATAGGGAAGGATTCCT-----------GTTCCACTTCT----------------------CCTGGCCCAAAGGCTTGAGCAAACAGGACACATACAGAAAGTAAGATCAACCAGACCCGAGA-TCCATCACACAGCAGGCTCTCTGACCCAGCAGAAAGTGCAGCCAATGCCTCCAGCCTTTTGTAACTGGGGGATGGGGAGGGCCAAGGAGGGCCACAGGGGACCTCACGACCAATCTCAAGA----TGTGCTATGCCCAGAAGTTCCAAAAGAACAGCAAGGGTTGCAGAAAATCCTCTCAGTCCCCATTC----------------------------------------------------------------------------- i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73876711 570 - 130959383 -CCA--TCTCTGTCTCCAGA------CGTCT--CAG---------------TCTACAGCCATGAGGACCTGGGGGTGGCTGGC---CACAC-AGATAAAGT-AGCAATGACATGTGCCAAGCACTGCCCAAGCACTGGG-TTCTGTGCTAAAGACACTCCACCTTCAACTCATTAATCTCCGCAGCTCCCTACGGGTGTAGTGCTAGGATCGCTCCTCGAGAATC--ACGTCCAGAAAGACTACATGGCTAGGAAAATGG-GATTCCCATGCAGACTCAGATCTGACATCAGAGCCAGC----ACCTCAACCACCCCCACAATACTGCCTCCTAATAGGGAAGGATTCCT-----------GTTCCATTTCT----------------------CCTGGCCCAAAGGCTTGAGCATACAGGACATATACAGAAAGTAAGGTCAACCAGACCCGAGA-TCCATCACACAGCAGGCTCTCTGACCCAGCAGAAAGTGCAGCCCATGCCTCTGGCCTTTTGTAGTTGGGGGCTGAGGAGGGCCAAGGAGGGCCACAGGGGACCTCATGACCAATCTCAAGA----TGTGCTACACCCAGAAGTTCCAAAAGAACAGCAAGGGTTGCAGAAAATCCTCTCGATCCCCATTC----------------------------------------------------------------------------- i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75437381 570 - 133195287 -CCA--TCTCTGTCTCCAGA------CGTCT--CAG---------------TCTACAGCCATGAGGACCTGGGGGTGGCTGGC---CACAC-AGATAAAGT-AGCAATGACATGTGCCAAGCACTGCCCAAGCACTGGG-TTCTGTGCTAAAGACACTCCACCTTCAACTCATTAATCTCCACAGCTCCCTACGGGTGTTGTGCTAGGATCGCTCCTCGAGAATC--ACGTCCAGAAAGACTACATGGCTAGGAAAATGG-GATTCCCATGCAGACTCAGATCTGACATCAGAGCCAGC----ACCTCAACCACCCCCACAATACTGCCTCCTAATAGGGAAGGATTCCT-----------GTTCCATTTCT----------------------CCTGGCCCAAAGGCTTGAGCATACAGGACATATACAGAAAGTAAGGTCAACCAGACCCGAGA-TCCATCACACAGCAGGCTCTCTGACCCAGCAGAAAGTGCAGCCCATGCCTCTGGCCTTTTGTAGTTGGGGGCTGAGGAGGGCCAAGGAGGGCCACAGGGGACCTCATGACCAATCTCAAGA----TGTGCTACACCCAGAAGTTCCAAAAGAACAGCAAGGGTTGCAGAAAATCCTCTCGATCCCCATTC----------------------------------------------------------------------------- i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73301072 571 - 125196307 -CCA--TCTCTGTCTCCAGA------CGTCT--CAG---------------TCTACAGCCATGAGGACCTGGGGGTGGCTGGC---CACAC-AGATAAAGT-AGCAATgacatgtgccaagcactgcccAAGCACTGGGTTTCTGTGCTAAAGACACTCCACCTTCAACTCATTAATCTCCGCAGCTCCCTACTGGTGCTGTGCTAGGATCGCTCCTCGAGAATC--ACGTCCAGAAAGACTACATGGCTAGGAAAATGG-GATTCCCATGCAGTCTCAGATCTGACATCAGAGCCAGC----ACCTCAACCACCCCCACAATACTGCCTCCTAATAGGGAAGGATTCCT-----------GTTCCATTTCT----------------------CCTGGCCCAAAGGCTTGAGCATACAGGACATATACAGAAAGTAAGGTCAACCAGACCCGAGA-TCCATCACACAGCAGGCTCTCTGACCCAGCAGAAAGTGCAGCCCATGCCTCTGGCCTTTTGTAGTTGGGGGCTGAGGAGGGCCAAGGAGGGCCACAGGGGACCTTATGACCAATCTCAAGA----TGTGCTACACCCAGAAGTTCCAAAAGAACAGCAAGGGTTGCAGAAAATCCTCTCGATCCCCATTC----------------------------------------------------------------------------- i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72133781 574 - 125710982 -CCA--TCTCTGTCTCCAGA------CGTCT--CAG---------------TCTACAGCCATGAGGACCTGGGGGTGGCTGGC---CACAC-AGATAAAGT-AGCAATGACATGTGCCAAGCACTGCCCAAGCACTGGG-TTCTGTGCTAAAGACACTCCACCTTCAACTCATTAATCTCCGCAGCTCCCTACTGGTGTTGTGCTAGGATCGCTCCTCGAGACTC--ACGTCCAGAAAGACTACATGGCTAGGAAAATGG-GATTCCCATGCAGTCTCAGATCTGACATCAGAGCCAAC----ACCTCAACCACCCCCACAATACTGCCTCCTACTAGGGAAGGATTCCT-----------GTTTCATTTCT----------------------CCTGGCCCAAAGGCTTGAGCATACAGGACATATACAGAAAGTAAGGTCAACCAGATCCGAGA-TCCATCACACAGCAGGCTCTCTGACCCAGCAGAAAGTGCAGCCCATGCCTCTGGCCTTTTGTAGTTGGGGGCTGAGGAGGGCCAAGGAGGGCCACAGGGGACCTCATGACCAATCTCAAGATGTGTGTGCTACACCGAGAAGTTCCAAAAGAACAGCAAGGGTTGCAGAAAATCCTCTCGATCCCCATTC----------------------------------------------------------------------------- i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75593967 545 - 121768101 -CCA--TCTCTGTCTCCAGC------TGTCT--CAG---------------TCCACAGCCATGAAGACCTGGGGGTGGCCAGC---CACAC-AGATAAAGT-AGCAGTGacatgtgccaagcactgcccaagcaccggg-ttctgtgctaaacacattccatcttcaactcattcatctccacagctcccttgagggattgtgctaggatcactccttgagaagctgatgtccagaaagactacgtggctAGGGAGAT---GATTCCCATGCAGACTCAGCCCTGATGCCAGAGCCAAC----GCCTCAACCA-CTCCACAAGAGT-CCTCCTAATAGGGGGG---------------------------CT----------------------CCTGGGCCAAAGGCTTGAGC-------ACATATACAGAAAGTAAGGTCAACGAGACCCGAGA-TCCATCACACAGCTGGCTCTCTGACCCAGCAGGAAGCGCAGCTGATGCCTTCAGGCTTTTGTAATTGGGGGATGTGGAGGGCCAGGGAGGGCCACAGGGAACCTCACAACCAATCTCAAAA----CGTGCTATATCCAGAAGTTCCCAGAGAAGAGCAAGAGTTGTAGAAAATCCTCTCAATCCCCATTC----------------------------------------------------------------------------- i calJac3.chr12 C 0 C 0 s mm10.chr14 24194733 550 + 124902244 -cca--tctttgtgaccagagcatctggtct--cag---------------ggactagttgggaggacctgagc-cagctggc---tacccgACACAAAGTGGGTACTGACGTCTAGGGAATGCAGCCAAGGTGTTCGG-GTCTGTACT----GCACCCCATCCTCATCTCATTAGTCCCC-CAACTGCCCACCAGGGTTATCTTAGCATTA-TCCATGAGCACCTGACACCCACAAA------ACAGACAGTAA----------CACATGGGTCCTTACCCCTAGCCCCAGACTCAGCTCAGACCTAGGTC--TTAAGCTACATTGCTTCCCAATGAGACTAGACTCCTTGGGACTCTACACTCCACTTTCAACCCCACTGTCTCCCCCATTACCTATACCAAATACAGAAGCACAGGGGGAACATA-ACTAGGTGAGGTCGGTCAGGTCTGAGACCCCAGCAAGAAGCAACCTTTCTGAGTTAGC----------TCTGATGACTACAGCAATTCCTAGC-------------------------------AGAGACCTCAAGATGAAGTCCACGA----TGTGCTCAGCCAGGAAATTCTAAAGTAA-ACCAAGTGGTAT-GAAAATCCTCTCTGGCACCATTT----------------------------------------------------------------------------- i mm10.chr14 I 327 C 0 s canFam3.chr4 27749684 606 + 88276631 GCCAGGGCCTTGTGTCCCAG------CCTCTGGCAGGATGAGGACACTGGCTCTGCAGGTATGAGGACCTGGGGGAGCCTAGCATTCAGAC-AATGAAAGG-AGTGCGGACAT-TGCCCAGCATAACCCAGGTGCTGGT-TTCTGAGCTAAGTGCACTCTGT----ACCTGATGAACGCCCACAGCACCCTCCCAGGTACGTGCTCTGACCATCCCGTGAGAAACTGACATCGAAAAGGATGGCACAGCCAAGAAAATGGTGCACCCCAAGCACACATGGCTCCAGTTCCAAAGCCAGG----GCCTCAACCA-CGACGTTACGCCGCCTCCCGTTAGG------------------------------TCT--------------------------------------GAACATGCCTGAGACATACAAAG---AAGGCCGCCCAGGTCTGAGAAGCCATCACACAGCAGACTGTCTGA---AGTAGGAAATGCCAC---------------------AGTTAGGAAGGTGGGGGGCAGAGCAGGACCACAGGGCACCTCAAGAAGAATCCCAAGA----TGAGCTAAGCCTGGACATTCCAGATTAATGATAAGTGTTGCAGAGAATCCTCTCCATTCCCTGTCAGTTAAAAATAAAGCTTTTCTgggcgcctgggtggctcagtcggttaagcatctggcttccatccaggtcgtgattc i canFam3.chr4 C 0 I 125 a score=35411.000000 s hg38.chr10_KI270825v1_alt 100775 9 + 188315 AACTGAAGT s panTro4.chr10 76478696 9 + 133524379 AACTGAAGT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76141255 9 - 133410057 AACTGAAGT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35083006 9 + 104879549 AACTGAGGT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73877281 9 - 130959383 AACTGAAGT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75437951 9 - 133195287 AACTGAAGT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73301643 9 - 125196307 AACtgaagt i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72134355 9 - 125710982 AACTGAAGT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75594512 9 - 121768101 AACAAAAGT i calJac3.chr12 C 0 C 0 s mm10.chr14 24195283 9 + 124902244 AAGTGAAAT i mm10.chr14 C 0 I 2599 s canFam3.chr4 27750415 9 + 88276631 aaataaAGT i canFam3.chr4 I 125 C 0 a score=331297.000000 s hg38.chr10_KI270825v1_alt 100784 97 + 188315 TTTTGTCTTTTTACTTGCatctagaggttgacagatattctgaaaatgatgcagtcctaccatccaaa-tggttgtcaggatccctc-aaatggccacc s panTro4.chr10 76478705 97 + 133524379 TTTTGTCTTTTTACCTGCatctagaggttgacagatattctgaaaatgatgcagtcctaccatccaaa-tggttgtcaggatccctc-aaatggccacc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76141264 97 - 133410057 TTTTGTCTTTTTACTTGCatctaggggttgacagatattctgaaaatgatgcagtcctaccatccaaa-tcgttgtcaggatccctc-aaatggccacc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35083015 97 + 104879549 TTTTGTCTTTTTACTTGCatctaggggttgacagatattctgaaaatgatgcagtcctaccatccaaa-tggttgtcaggatccctc-aaatggctacc i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73877290 97 - 130959383 TTTTGTCTTTTTACTTGCATCTAGAGGTTGACAGATATTCTGAAAATGATGCAGCCCTACCATACAAA-TGGTTGTCAGGatccctc-aaatggccact i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75437960 97 - 133195287 TTTTGTCTTTTTACTTGCATCTAGAGGTTGACAGATATTCTGAAAATGATGCAGCCCTACCATACAAA-TGGTTGTCAGGATCCCTC-AAATGGCCACT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73301652 97 - 125196307 ttttgtctttttacttgCATCTAGAGGTTGACAGATATTCTGAAAATGATGCAGCCCTACCATACAAA-TGGTTGTCAGGATCCGTC-AAATGGCCACT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72134364 98 - 125710982 TTTTGTCTTTTTACTTGCATCTAAAGGTTGACAGATATTCTGAAAATGACGCAGCCCTACCATACAAA-TGGTTGTCAGGATCCCTCAAAATGGCCACT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75594521 94 - 121768101 TTTTGTC---TTAATTGCATCTAGAGGTTGACAGATACTCTGAAGATGATACAGTCCTACCATCCAAA-TGGTCATCAGGATCCCTC-AAACGGCCACC i calJac3.chr12 C 0 C 0 s canFam3.chr4 27750424 98 + 88276631 TATTCTTTTTTTGCTTGCacctcaagactgaaagacgttttgaaggtgatgtggccctcccatccaaactggttgctagaatgcccc-acaaggcggcc i canFam3.chr4 C 0 C 0 e mm10.chr14 24195292 2599 + 124902244 I a score=1006301.000000 s hg38.chr10_KI270825v1_alt 100881 365 + 188315 aagacc----aaatt---ctacagcaaaggagctcactacttcccagcagagcccatcttatctctctccctaaaattatgccctctactgagtt--aatctgtccctggacattccctccactgacccttgatctaacccctaagggccacaggga----acaactgga-------tttcttgtatgcaatagacctgcaagcatttgaagacaaccatgaagttcctttaccaccatatgcccatcagaat-ggctaaaat-aaaaagcaatgccaccaaatgctggcaaggatacagctggattctcaaaactggaattctcaaacactgctgatgagaatacaaagtcatgcagccacttcagaaaacagtttgacagtttct s panTro4.chr10 76478802 365 + 133524379 aagacc----aaatt---ctacagcaaaggagctcactacttcccagcagagcccatcttatctctctccctaaaattatgccctctactgagtt--aatctgtccctggacattccctccactgacccttgatctaacccctaagggccacaggga----acaaCTGGA-------TTTCTTGTATGCAATagacctgcaagcatttgaagacaaccatgaagttcctttaccaccatatgcccatcagaat-ggctaaaat-aaaaagcaatgccaccaaatgctggcaaggatacagctggattctcaaaactggaattctcaaacactgctgatgagaatacaaagtcatgcagccacttcagaaaacagtttgacagtttct i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76141361 365 - 133410057 aagacc----aaatt---ctacagcaaaggagctcactacttcccagcagagcccgtcttatctctctccctaaaattatgccctctaccgagtt--agtctgtccctggacattccctccactgacccttgatctaacccctaagggccacaggga----acaaCTGGA-------TTTCTTGTATGCAATagacctgcaagcatttgaagacaaccatgaagttcctttaccaccatatgcccatcagaat-ggctaaaat-aaaaagcaatgccaccaaatgctggcaaggatacagctggattctcaaaactggaattctcaaacactggtgatgagaatacaaagtcatgcagccacttcagaaaacagtttgacagtttct i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35083112 365 + 104879549 aagacc----aaatt---ctacagcgaaggagctcactacttcccagcagagcccatcttatctctctccctaaaattatgccctctactgagtt--aatctgtccctggacattccctccactgacccttgatctaacccctaagggctacaggga----acaaCTGGA-------TTTCTTATATACAATAgacttgcaagcatttgaagacaaccctgaagttcctttaccaccatatgcccatcagaat-ggctaaaat-aaaaagcaatgccaccaaatgctggcaaggatacagctggattctcaaaactggaattctcaaacactgctgatgagaatacaaagtcatgcagccacttcagaaaacagtttgacagtttct i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73877387 365 - 130959383 aagacc----aaact---ccacagtgaaggagctcactacttcccagcagcacccatcttatctctccccctaaaatgatgccctctactgaatt--aatctgtctctggatattccctccactgacccttgatctaacccctaaagcccacaagga----acaactgga-------tttcgtgtatgcaatagacctgtaagcatttgaagacaaccatgaagttcctttaccaccatatgcccatcagaat-ggccaaaat-aaaaagcagtgccaccaaatgctggcaaggatacagctggattctcaaaactggaattctcaaacactgctgatgggaatacaaagtcatgcagccacttcagaaaacagtttgacagtttct i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75438057 365 - 133195287 AAGACC----AAACT---CCACAGTGAAGGAGCTCACTACTTCCCAGCAGCACCCATCTTATCTCTCCCCCTAAAATGATGCCCTCTACTGAATT--AATCTGTCTCTGGATATTCCCTCCACTGACCCTTGATCTAACCCCTAAAGCCCACAAGGA----ACAACTGGA-------TTTcttgtatgcaatagacctgtaagcatttgaagacaaccatgaagttcctttaccaccatatgcccatcagaat-ggccaaaat-aaaaagcagtgccaccaaatgctggcaaggatacagctggattctcaaaactggaattctcaaacactgctgatgggaatacaaagtcatgcagccacttcagaaaacagtttgacagtttct i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73301749 365 - 125196307 AAGACC----AAACT---CCACAGTGAAGGAGCTCACTACTTCCCAGCAGCACCCATCTTATCTCTCCCCCTAAAATGATGCCCTCTACTGAATT--AATCTGTCTCTGGATATTCCCTCCACTGACCCTTGATCTAACCCCTAAAGCCCACAAGGA----ACAACTGGA-------TTTCTTGTATGCAATAGACCTGTAAGCATTTGAAGACAACCATGAAGTTCCTTTACCACCATATgcccatcagaat-ggctaaaat-aaaaagcaatgccaccaaatgctggcaaggatacagCTGGATTCTCAAAACTGGAATTCTcaaacactgctgatgggaatacaAAGTCATGCAGCCACTtcagaaaacagtttgacagtttct i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72134462 365 - 125710982 AAGACC----AAACT---CCACAGTGAAGAAGCTCACTACTCCCCAGCAGCACCCATCTTATCTCTCCCCCTAAAACGATGCCCTCTACTGAGTT--AATCTGTCTCTGGATATTCCTTCCACTGACCCTTGATCTAACCCCTAAAGTCCACAAGGA----ACAACTGGA-------TTTcttgtacgcaatagatctgtaagcatttgaagacaaccatgaagttcctttaccaccatatgcccatcagaat-ggctaaaat-aaaaagcaatgccaccaaatgctggcaaggatacagctggattctcaaaactggaattctcaaacactgctgatgggaatacaaagtcatgcagccacttcagaaaacagtttgacagtttct i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27750522 372 + 88276631 gaggctgctggaactccgccacagggagggagctcactactttacagcaaagcccagctaatccctccccatcaagtcattctctgtacagagttagaatccatctcccgcaacttcctccactgacc--tagatgggctcccaagggccacaaggctcctacacctgtaactaactcctcttctatacaacagacctgaaagtatttgaagaccattgtcaagtccctttaTCACTACGAG----TGagaataagctaagatgaaaaggcgacaactctaaatgttggcaagggaa-----gga----agaaactcgaattcctaaatgtcgcaggtggaaatgtggaatgacacggccactttagaaagcactttggcagtcttt i canFam3.chr4 C 0 I 131 e mm10.chr14 24195292 2599 + 124902244 I e calJac3.chr12 75594615 0 - 121768101 C a score=927622.000000 s hg38.chr10_KI270825v1_alt 101246 353 + 188315 tataaagctaaacatgcaattgccataccacccagcaatcccattcttaggtattttacccaggagaaatgagaatttatgttcaaacaaaaaccagcacacagctgtttagagcagctagggaatgaataaacaactgtgttatgtccttatgatggagtattactcagcaatgaaaagggatgaatgactaatacaactgcggacac------acacagggtgtgggggaagctggaatgccctgcgttaatcaaaagaagcctgactctaaaagctacatactacacaa--cca-ttcat-atgacattctgggaagggcaacactacagggacagaaaagagatgagtggctgccaagg s panTro4.chr10 76479167 353 + 133524379 tataaagctaaacatgcaattgccataccacccagcaatcccattcttaggtattttacccaggagaaacgagaatttatgttcaaacaaaaaccagcacacagctgtttagagcagctagggaatgaataaacaactgtgttatgtccttatgatggagtattactcagcaatgaaaagggatgaatgactaatacaactgcggacgc------acacagggtgtgggggaagctggaatgccctgcgttaatcaaaagaagcctgactctaaaagctacatactacacaa--cca-ttcat-atgacattctgggaagggcaacactacagggacagaaaagagatgagtggctgccaagg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76141726 354 - 133410057 tataaagctaaacacgcaattgccataccacccagcaatcccattcttaggtattttacccaggagaaatgagaatttatgttcacacaaaaaccagcacacagctgtttagagcagctagggaatgaataaacaactgtgttatatccttatgatggagtattactcagcaatgaaaagggatgaatgactgatacaactgcagatgc------acacagggtgtgggggaagctggaatgccctgcattaatcaaaagaagcccgactctaaaagctacatactacacaa--ccatttcat-atgacattctgggaagggcaacactacatggatagaaaacagatgagtggctgccaggg i ponAbe2.chr10 C 0 I 1 s nomLeu3.chr18 35083477 353 + 104879549 tataaagctaaacacccaattgccataccacccagcaatcccattcttaggtattttacccaggagaaatgaaaatttatgttcacacaaaaaccagcacacagctgtttagagcatctagggaatgaataaacaactgtgttatgtccttatgatggagtatcactcagcaattaaaagggatgaatgaccgatacaactgtggacgc------acacagggtgtgggggaagctggaatgccctgcattaagcaaaagaagcccgactctaaaagttacatactacacaa--cca-ttcat-acgacactgtgggaagggcaacactacagggacagaaaagagatgagtggctgccaggg i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73877752 349 - 130959383 tataaagctaaacatgcaattgccataccacccagcaatcccatgcttaggtattttacccaggagaaatgagaatttatgtgcatacaaaaaccagcacacagctgttcagagcagctagggaatgaataaacaacggtgttatgtccttatgatggagtattactcagcaatgaaaagcgatgaatg----atacaactgtggatgc------acgcagggtgtgggggaagctggagtgccctgcgttaagcaaaagaagcccaactctaaaaggtacagaccacacga--cca-ctgat-atgacattctgggaagggcaacactacaggaacagaaaagagatgagtggctgccaggg i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75438422 349 - 133195287 tataaagctaaacatgcaattgccataccacccagcaatcccatgcttaggtattttacccaggagaaatgagaatttatgtgcatacaaaaaccagcacacagctgttcagagcagctagggaatgaataaacaacggtgttatgtccttatgatggagtattactcagcaatgaaaagggatgaatg----atacaactgtggatgc------acgcagggtgtgggggaagctggagtgccctgcgttaagcaaaagaagcccaactctaaaaggtacagaccacacga--cca-ctgat-atgacattctgggaagggcaacactacaggaacagaaaagagatgagtggctgccaggg i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73302114 349 - 125196307 tataaagctaaacaTGCAATTGCCATaccacccagcaatcccatgctTAGGTATTTTACCCAGGAGAAATGAGAATTTATGTGCATACAAAAACCAGCACACAGCTGTTCAGAGCAGCTAGGGAATGAATAAACAACGGTGTTATGTCCTTATGATGGAGTATTACTCAGCAAGGAAAAGGGATGAATG----ATACAACTGTGGATGC------ACGCAGGGTGTGGGGGAAGCTGGAGTGCCCTGCGTTAAGCGAAAGAAGCCCAACTCTAAAAGGTACAGACTACACGA--CCA-Ctgat-atgacattctgggaagGGCAACactacaggaacagaaaagagatGAGTGGCTGCCAGGG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72134827 350 - 125710982 tataaagctaaacatgcaattgccataccacccagcaatcccatgcttaggtattttacccaggagaaatgagaatttatgtgcatacaaaaaccagcacacagctgttcagagcagctagggaatgaataaacaacggtgttatgtccttatgatggagtattactcagcaatgaaaagggatgaatg----atacaactgtggatgc------acacagggtgtgggggaagctggagtgccctgcgttaagcaaaagaagcccaactctaaaaggtacagactacacga--cca-ctgataatgacattctgggaagggcaacactataggaacagaaaagagatgagtggctgccaggg i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27751025 345 + 88276631 tataaagttaaacatgcatttacactaccacccagtaatcccactcctgggtactg---acacgagaaaagaaaagctacgtgcccacaaacactagcacacaagcacttaaagcagagggcgaatggataaatggcaacgtccccttcctccaaaggaatactactcagcaggggaagggaatggccg----------ctgacgaagcaccaggaccccgagagctggggagtctgaaa-gccctctgctgagtgaaggcagccagacacaaaaggctataaa-tatacgattcca-tttgt-aggacatctgagaaagggcggaaacataggg-cagaaaagagatgaatggttgctgggg i canFam3.chr4 I 131 C 0 e mm10.chr14 24195292 2599 + 124902244 I e calJac3.chr12 75594615 0 - 121768101 C a score=859088.000000 s hg38.chr10_KI270825v1_alt 101599 302 + 188315 actgaagg--tgggg----------aaagggcagattgcaaaagtgca-ga-gggaatttttaagatacagagggcagtgttttgcatcttaaaagtagcaatggttgcatgacta------tttgtcaaaact---tgaactgtatactta-caaaaaatacattttactgtatgtaaattataTCTCAATGAACATAAC--CTTAACAA-----------AAAAAAA-----tttcttttttg----agacagggtcttgctctgtcacccaggctagagtgcagtgacacaatcaaggctcactacaacctccacctcctgggctcaagcaatcctcccacctca s panTro4.chr10 76479520 302 + 133524379 actgaagg--tgggg----------aaagggcagattgcaaaagtgca-ga-gggaatttttaagatacagagggcagtgttttgcatcttaaaagtagcaatggttgcatgacta------tttgtcaaaact---tgaactgtatactta-caaaaaatacattttactgtatgtaaattatatctcaatgaacataac--cttaacaa-----------aAAAAAA-----tttcttttttg----agacagggtcttgctctgtcacccaggctagagtgcagtgacacaatcaaggctcactgcaacctccacctcctgggctcaagcaatcctcccacctca i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76142081 296 - 133410057 actgaggggtggggg----------aaagggc----------nnnnnn-nn-nngaatttttaagatacagaaagcagtgttttgcatcttaaaagtagcaatggttgcatgac--------tttgtcaaaact---taaactgtatactta--aaaaaatacattttactgtatgtaaattatatctcaatgaacataac--cttaaCCA-----------AAAAAAAAAAAtttttttttttg----agacagggtcttgctctgtcacccaggctggagtgcagtgacacaatcaaggcccactgcaacttccacctcctgggctcaagcaatcctcccacctca i ponAbe2.chr10 I 1 C 0 s nomLeu3.chr18 35083830 308 + 104879549 actgaggg--tgggg----------aaagggcagactgcaaaggtaca-ga-gggaatttttaagatacagaacgcagtgttctgcatcttaaaagtagcaatggttgcatgacta------tttgtcaaaact---tgaactgtatacttaaaaaaagatacattttactgtatgtaaagtatATCTCAATGAACATAAC--CTTAACAA-----------AAAAAAAAACttttttttttttg----agacagggtcttgctctgtcacccaggctggagtgcagtggcacaatcaaggctcactgcaacctcgacctcctgggctcaagcaatcctcccacctca i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73878101 301 - 130959383 actgaggg--tgggg---------aaaagggcagactgcaaaggtgca-ga-gggaatttttaagatacagaaggaagtgttctgcatcttaaaagtagcaatggttgcatgacta------tttgtcaaaact---tgaactgtatacttt-aaaaaaatacactttagtgtatgtaaattatatctcaatgaacataac--cttaacaa-----------aACAAAA-------ttttttttg----agacagggtcttgctctgtcacccaggttggagtgcagtggcacaatcatgactcactgcaacctcgacctcctgggctcaagcaatcctcccacctca i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75438771 301 - 133195287 actgaggg--tgggg---------aaaagggcagactgcaaaggtgca-ga-gggaatttttaagatacagaaggaagtgttctgcatcttaaaagtagcaatggttgcatgacta------tttgtcaaaact---tgaactgtatacttt-aaaaaaatacactttagtgtatgtaaattatatctcaatgaacataac--cttaacaa-----------aACAAAA-------ttttttttg----agacagggtcttgctctgtcacccaggttggagtgcagtggcacaatcatgactcactgcaacctcgacctcctgggctcaagcaatcctcccacctca i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73302463 299 - 125196307 ACTGAGGG--TGGGG---------AAAAGGGCAGACTGCAAAGGTGCA-GA-GGGAATTTTTAAGATACAGAAGGAAGTGTTCTGCATCTTAAAAGTAGCAATGGTTGCATGACTA------TTTGTCAAAACT---TGAACTGTATACTTC-aaaaaaaTACACTTTagtgtatgtaaattatatctcaatgaacataac--cttaacaa-----------aaaaaaa---------ttttttg----agacagagtcttgctctgtcacccaggttggagtgcagtggcacaatcatgactcactgcaacctcgacctcctgggatcaagcaatcctcccacctca i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72135177 301 - 125710982 actgaggg--tgggg---------aaaagggcagactgcaaaggtgca-ga-gggaatttttaagatacagaaggaagtgttctgcatcttaaaagtagcaatggttgcatgacta------tttgtcaaaact---tgaactgtatactta-aaaaaaatacactttagtatatgtaaattatatctcaataaacataac--cttaacaa-----------aAAAAAA-------ttttttttg----agacagggtcttgctctgtcacccaggttggagtgcagtggcacaatcatgactcactgcaacctcgacctcctgggctcaagcaatcctcccacctca i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75594615 300 - 121768101 Actgaggg--cagg-----------aaagggcagactacaaaggtgcagga-gggaatttttaggatacagaaggaagtgttctgcatcctcaaagtaacaactgttacatgacta------tttgtcaaaact---tgaactgcatacttt---aaaaatacattttgctatatgtaaattatatctccatcaacataac--cttaacaa--CAA--CAACAACAAAA-----------ttctg----agacagggtcttgctctgtcaccgaggct-gagtgcagtggcataatcaaggctcactgcaacctcaacctcctgggctcaagtaatcctcccatctca i calJac3.chr12 C 0 C 0 s canFam3.chr4 27751370 299 + 88276631 gctgggag--tgggggtggagggaagaaaggctgagtgcaaagtcaca-gaggggaatgtcttgg--gctgagggagatgctctgtatcttt-ctgtggcggtggttacacgaccatgtgagtttgtcagaagtcactgaactataca-----taaaggagaagttttactaaatgcaatttatacctcgatg-acatgacttcttaaaaaaTTAAGCTAACAATAAAA-------CCTGTGGTGCCCCAAACAGAAGC---CACCAT--CCCAGG---------AGTGGTGTGGTCG----TCGGTGGAGCTTGGACCGCC------------AGCCTCCCACCCCA i canFam3.chr4 C 0 I 153 e mm10.chr14 24195292 2599 + 124902244 I a score=818505.000000 s hg38.chr10_KI270825v1_alt 101901 277 + 188315 gcctcccaagcagctgggactacaggggtgtgctaccatgcctggctaattattattatttt---tatttattgtagcgacagggccccactatgttgcccaggctagtctcaaactcctgggctcaagcaatccttctgccttggcctcccaaagtgctgggattataggtttgagcaaccacacctagccTA---------TTTTTTTAAGAAAACCAAACTGTGATGCCCTGAATGAAGCCATCATCCTAAGAGTGATGTTGACAGGTAAAGAGATGAGGACCAAC s panTro4.chr10 76479822 277 + 133524379 gcctcccaagcagctgggactacaggggtgtgctaccatgcctggctaattattattatttt---tatttattgtagcgacagggccccactatgttgcccaggctagtctcaaactcctgggctcaagcaatcctcctgccttggcctcccaaagtgctgggattataggtttgagcaaccacatctagccTA---------TTTTTTTAAGAAAACCAAACTGTGATGCCCTGAATGAAGCCATCATCCTAAGAGTGATGTTGACAGGTAAAGAGATGAGGACCAAC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76142377 279 - 133410057 gcctcccaagcagctgggactacaggggtgtgctaccatgcctggctaattatttttttttt---tatttattgtagcgacagggccccactatgttgcccaggctggtctcaaactcctgggctcaagcaatcctcctggcttggcctcccaaagtgccgggattataggtttgagcaaccacacttagccTA-------CTTTTTTTTAAGAAAACCAAACTGTGATGCCCTGAATGAAGCCACCATCCTAAGAGTAATGTTGACAGGTAAAGAGATGAGGACCAAC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35084138 280 + 104879549 gcctcccaagcagctgggactacaggggtgtgctaccatgcctggctaagtat--ttgtttt---tacttattgtagcgacagggccccactatgttgcccaggctggtctcaaactcctgggctcaagcaatcctcctgccttggcctcccaaagtgctgggattataggtttgaacaaccacacctagccTAA----ACATTTTTTCTAAGAAAACCAAACTGTGATCCCCTGAATGAAGCCATTATCCTAAGAGTGATGCTGACAAGTAAAGAGATGAGGACCAAC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73878402 285 - 130959383 gcctcccaagcagctgggactacaggggtgtgctaccatgcctggctaattattattattt----tactttttgtagcaacagggccccactatgttgcccaggctggtcccaaactcctgggctcaagccatcctcctaccttggcctcctgaagtgctgggattataggtgtgagcaaccacacccagccTCACAACATTTTTTTTTTAAGAAAACCAAACTGTGATGCCCTGAATGCAGCCATCATCCTACGAGTGATGTTGACAGGTAAAGAGATGAGGACTAAC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75439072 285 - 133195287 gcctcccaagcagctgggactacaggggtgtgctaccatgcctggctaattattattattt----tactttttgtagcaacagggccccgctatgttgcccaggctggtcccaaactcctgggctcaagccatcctcctaccttggcctcctgaagtgctgggattataggtgtgagcaaccacacccagccTCACAACATTTTTTTTTTAAGAAAACCAAACTGTGATGCCCTGAATGCAGCCATCATCCTACGAGTGATGTTGACAGGTAAAGAGATGAGGACTAAC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73302762 288 - 125196307 gactcccaagcagctgggactacaggggtgtgctaccatgcctggctaattattattattttttctactttttgtagcaacagggccccactatgttgcccaggctggtcccaaactcctgggctcaagccatcctcctaccttggcctcctgaagtgctgggattataggtgtgagcaaccacacctaGCCTCacaaca-cttttttttaagaaaaccaaaCTGTGATGCCCTGAATGAAGCCATCATCCTACGAGTGATGTTGACAGGTAAAGAGATGAGGACTAAC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72135478 286 - 125710982 gcctcccaagcagctgggactacaggggtgtgctaccatgcctggctaattattattattttttttactttttgtagcaacagggccccactatgttgcccaggctggtcccaaactcctgggctcaagccatcctcctaccttgacctcctgaagtgctgggattataggtgtgagcaaccacacctagccTC---ACATTTTTTTTTTAAGAAAACCAAACTGTGATGCCCTGAATGAAGCCATCATCCTACGAGTGATGTTGACAGGTAAAGAGATGAGGACCAAC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75594915 285 - 121768101 gcttcccaagcagctgggactagaagggtgtgcgaccatgcctggctaattttttctttttt---aacttgttgtagcgacagagccccactatgttgcccaggctggtctcaaactcctgggctcaagcaatcctcctgccttggcctcccacagtgctcggataacaggtgtgagcaaccataccGAACCTAAAAAAA-TTTTAAGTTAAGAAAACCAAACTGTGATGCCCTGAATGAAGCCATCATCCTAAGAGTGATGTTGACAGGTAAAGAGATGAGGACCAAC i calJac3.chr12 C 0 C 0 e canFam3.chr4 27751669 153 + 88276631 I e mm10.chr14 24195292 2599 + 124902244 I a score=2626921.000000 s hg38.chr10_KI270825v1_alt 102178 941 + 188315 CTCCTCTGCTGTCACT-GTGGTTATTTACAGTAAAC---TTTTTAAA-----AACAGGCAAAACAGAAACTAACATAAAGCTGGGTTGTCAACAAAAGCCTCCAAAGTAGCTGCCAACAAAAGCTTCCAATGCAGTTCTAACCTTGTGCAGTTGTTCTTCTGGACTCAAATGCAAAGCTGTCAACTCTCCCGTGACCTCAGGCTTTCCTTACCCAAGTCTGGCAACCACTGGAGAAGGAGGCAGATTGTCCTTTTCCTTTTGGTGTTCAGGATCAGATTTCAGAGGTAAGGGATTTGGTTTGGACTAAAATG-----GCCCAAAACAGGAAGACACCAGATCAGGAGCAGGCTCTGGATGG-AGACAAAGAGCAGCCAGCCCTGCGCTGCTCTTTTCACCCCCATTTTGTAAAGGAGGCAACAGGAAGACACAGCCCTGCCTT-ACGaggaagctgga-agaggagagaaggaagcaggacagaaggaagGGGCTCAGAGCCGTCCCAACACAACCCATCTCAGTCTCCAGCCATGAGGACCTTGGGGCGGCCAGCCTCCCTCTGACCTGGGTGTAAGAAGGAGGGCAGAAGGG---AGTGTCCCCATCACAGGAATCCTCAGCTCCT----TCAGTTGCCCTGGCTGCTATGGTCACC-------ACCACCGAGGCTCAGCAAATGAACTGGCAGCTGGGTGGATTTCTCAGCCACCGCCCTTTGTCCTGGGCTCCCTCACTGTCATGCTCCCACTGACCCTGGAGGCGCATCCTTGGTC----TTACAGCTGGGCAGGTCTCACCTTTGCTTCCAGGCCCTGTATGCCTGTGCTTCCAGGAGCCAGAGAG---------------------------------------ATGTCCAGGTAAACTTCCTGGCCACCTCCAGGCCCTGGCT-GCCCGGGAGAGGCAAAGCAGTGGCAGAGCACAGTCATCA-GAGCACCACGTCATCCTCACCTACAACTCAGGACACCCAGAGCCA s panTro4.chr10 76480099 937 + 133524379 CTCCTCTGCTGTCACT-GTGGTTATTTACAGTAAAC---TTTTTAAA-----AACAGGCAAAACAAAAACTAACATAAAGCTGGGTTGTCAACAAAAGCCTCCAAAGTAGCTGCCAACAAAAGCTTCCAATGCAGTTCTAACCTCGTGCAGTTGTTCTTCTGGACTCAAACGCAAAGCTGTCAACTCTCCCGTGACCTCAGGCTTTCCTTACCCAAGTCTGGCAACCACTGGAGAAGGAGGCAGATTGTCCTTTTCCTTTTGGTGTTCAGGATCAGATTTCAGAGGTAAGGGATTTGGTTTGGACTAAAATG-----GCCCAAAACAGGAAGACACCAGATCAGGAGCAGGCTCTGGATGG-AGACAAAGAGCAGCCAGCCCTGCACTGCTCTTTTCACCCCCATTTTGTAAAGGAGGCAACAGGAAGACACAGCCCTGGCTT-ACGAGGAAGCTGGA-AGAGGAGAGAAGGAAGCAGGACAGAAGGAAGGGGCTCAGAGCCGTCCCAACACAACCCATCTCAGTCTCCAGCCATGAGGACCTTGGGGCGGCCAGCCTCTCTCTGACCTGGGTGTAAGAAGGAGGGCAGAAGGG---AGTGTCCCCATCACAGGAATCCTCAGCTCCT----TCAGTTGCCCTGGCTGCTACAGTCACC-------ACCACCGAGGCTCAGCAAATGGACTGGCAGCTGGGTGGATTTCTCAGCCACCGCCCTTTGTCCTGGGCTCC----CTGTCATGCTCCCACTGATCCTGGAGGCGCATCCTTGGTC----TTACAGCTGGGCAGGTCTCACCTTTGCTTCCAGGCCCTGTATGCCTGTGCTTCCAGGAGCCAGAGAG---------------------------------------ATGTCCAGGTAAACTTCCTGGCCACCTCCAGGCCCTGGCT-GCCCGGGAGAGGCAAAGCAGTGGCACAGCACAGTCATCA-GAGCACCACGTCATCCTCACCTACAACTCAGGACACCCAGAGCCA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76142656 888 - 133410057 CTCCTCTGCTGTCACT-GTGGTTATTTACAGTAAAC---TTTTTAAA-----AACAGGCAAAACAAAAACTAACATAAAGCTGGGTTGTCAACAAAAGCCTCCAAAGTAGCTGCCAACATAAGCTTCCAATGCAGTTCTAACCTTGTGCAGTTGTTCTTCTGGACTCAAATGCAAAGCTGTCAACTCTCCCGTGACCTCAGGCTTTCCTTATCCAAGTCTGGCAACCACTGGAGAAGGAGGCAGATTGTCCTTTTCCTTTTGGTGTTCAGAATCAGATTTCAGAGGTAAGAGATTTGGTTTGGACTAAAATG-----GCCCAAAACAGGAAGACACTAGACCAGGAGCAGGCTCTGGATGGTGGACAAAGAGCAGCCAGCCCTGGGCTGCTCTTTTCACCCCCATTTTGTAAAGGAGGCAACAGAAAGACACAGCCCTGGCTT-ACAAGGAAGCTGGA-AGAGGAGAGAAGGAAGCAGGACAAAAGGAAGGGGCTCAGAGCCATCCCAACACAACCCAGCTCAGTCTCTAACCATGAGGACCTTGGGGCGACCAGCCTCCCTCTGACCTGGGTGTAAGAAGGCGGGCAGAAAGG---AGTGTCCCCATCACAGGAATCCTCAGCTCCT----TCAGTTGCCCTGGCTGCTACGGTCACC-------ACCACCGAGGCTCAGCAAATGGACTGGCGGCTGGGTGGATTTCTCAGCCACCGCCCTTTGTCCTGGGCTCCCTCACTGTCATGCTCCCACTGACCCTGGAGGCGCATCCTTGGTC----TTACAGCTGGGCAGGTCTCACCTTTGCTTCCAGGCCCTGTATGCCTGTGCTTCCAGGAGCCAGAGAG---------------------------------------ATGTCCAGGTAAACTTCCTGGCCACCTCCAGGCCCTGGCT-GCCTGGGAGAGGCAAAGCAGTGGCAGAG-------------------------------------------------------CA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35084418 925 + 104879549 CTCCTCTGCTGTCACT-GTGGTTATTTACAGTAAAC---TTTTTAAA-----AACAGGCAAAACAAAAACTAACATAAAGCTGGGTTGTCAACAAAAGCCTCCAAAGTAGCTGCCAACAAAAGCTTCCAATGCAGTTCTAACCTTGTGCAGTTGTTCTTCTGGACTCAAATGCAAAGCTGTCAACTCTCCCGTGACCTCAGGCTTTCCTTACCCAAGTCTGGCAACCACTGGAGAAGGAGGCAGATTGTCCTTTTCCTTTTGGTGTTCAGGATCAGATTTCAGAGGTAAGGGATTTGGTTTGGACTAAAATG-----GCCCAAAACAGGAAGACACCAGACCAGGAGCAGGCTCTGCATGGTGGACAAAGAGCAGCCAGCCCTGGGCTGCTCTTTTCACCCCCATTTTGTAAAGGAGGCAACAGAAAGACGCAGCCCTGGCCT-GCGaggaagctgga-agaggagagaaggaagcaggacagaaggaagGGGCTCAGAGCTGTCCCAGCACAACTCATCTCAGTCTCCAGCCATGAG---------------CGCCCCCCTCTGACCT-GGTGTAAGAAGGAGGGCAGAAGGG---AGTGTCCCCATCACAGGAATCCTCAGCTCCT----TCAGTTGCCCTGGCTGCTGCAGTCACC-------ACCACCGAGGCTCAGCAAATGGACTGGCGGATGGGTGGGTTTCTCAGCCACCGCCCTTTGTCCTGGGCTCCCTCACTGTCATGCTCCCACTGACCCTGGAGGTACCTCCTTGGTC----TTACAGCTGGGCAGGTCTCACCTTTGCTTCCAGGCCTTGTATGCCTGTGCTTCCAGGAGCCAGAGAG---------------------------------------ATGTCCAGGTAAACCTCCTGGACACCTCCAGG-CCTGGCT-GCCCGGGAGAGGCAAAGCAGTGGCAGAGCACAGTCATCA-GAGCACCACATCATCCTCACCTACAACTCAGGACACCCAGAGACA i nomLeu3.chr18 C 0 T 54 s rheMac3.chr9 73878687 887 - 130959383 CTCCTCTGCTGTCACT-GTGGTTATTTACAGTAAAC---TTTTTAAA-----AACAGGCAAAACAAAAACTAACATCAAGCTGGGTTGTCAACAAAAGCCTCCAAAGTAGCTGTCAACAAAAGCTTCCAATGCAGTTCTAACCTTGTGCAGTTGTTCTTCTGGACTCAAAAGCAAAGCTGTCAACTCTCCCATGACCTCAGGCTTTCCTTACCCAAGTCTGGCAACCCCTGGAGAAGGAGGCAGATTTTCCTTTTCCTTTT-GTGTTCAGGATCAGATTTCAGAGGTAAAGGATTTGGTTTGGACTAAAATG-----GCCCAAAAGAGGAAGACACCAGACCAGGAACAGGCTCTGGATGGTGGACAAAGAGCAGCTggt----ggctgctcttttcatccccattttataaaggaggcaacagcaagacgcag-CCTGGCTT-AGAAGGAAGCTGGAGAAAGGAGAGAAGGAAACAGGACAGAAGGAAGGGGCTCAGAGCCATGCCAACACAACCCATCACAGTCTCCAGCCATGAAGACCTCAGGGCAGCCAGCCTCCTTCTGACCTGGGTGTAAGAAGGAGGACAGAAGGG---AGTGTCCCCATCACAGGAATCCTCAGCTCCTTGTGTCAGTTGCCCTGGCTGCTACTGTCACT-------ACCACCGAGGCTCAGCAAATGGACTGGCGGGTAGGTGGATTTCTCAGCTGTCACCCTTTGTCCTGGGCTCCCTCACTGTCATGCTCCCACTGACCCTGGAGGCGCCTCCTTGGTC----TTACAGCTGGGCAGGTCTCATCTTTGCTTCTAGGCCCTGTAGGCCTGTGCTTCCAGGAGCCAGAGAG---------------------------------------ATGTCCAGGTAAAATTCCTAGCCACTTCCAGGCCCTGGCT-ACCAGGGAGAGGCAAAGCAGTGACAGAGCA------------------------------------------------------- i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75439357 887 - 133195287 GTCCTCTGCTGTCACT-GTGGTTATTTACAGTAAAC---TTTTTAAA-----AACAGGCAAAACAAAAACTAACATCAAGCTGGGTTGTCAACAAAAGCCTCCAAAGTAGCTGTCAACAAAAGCTTCCAATGCAGTTCTAACCTTGTGCAGTTGTTCTTCTGGACTCAAAAGCAAAGCTGTCAACTCTCCCATGACCTCAGGCTTTCCTTACCCAAGTCTGGCAACCCCTGGAGAAGGAGGCAGATTTTCCTTTTCCTTTT-GTGTTCAGGATCAGATTTCAGAGGTAAAGGATTTGGTTTGGACTAAAATG-----GCCCAAAAGAGGAAGACACCAGACCAGGAACAGGCTCTGGATGGTGGACAAAGAGCAGCTggt----ggctgctcttttcatccccattttataaaggaggcaacagcaagacgcag-CCTGGCTT-aggaggaagctggagaaaggagagaaggaaacaggacagaaggaAGGGGCTCAGAGCCATGCCAACACAACCCATCACAGTCTCCAGCCATGAAGACCTCGGGGCAGCCAGCCTCCTTCTGACCTGGGTGTAAGAAGGAGGACAGAAGGG---AGTGTCCCCATCACAGGAATCCTCAGCTCCTTGTGTCAGTTGCCCTGGCTGCTACTGTCACT-------ACCACCGAGGCTCAGCAAATGGACTGGCGGGTAGGTGGATTTCTCAGCTGCCACCCTTTGTCCTGGGCTCCCTCACTGTCATGCTCCCACTGACCCTGGAGGCGCCTCCTTGGTC----TTACAGCTGGGCAGGTCTCATCTTTGCTTCTAGGCCCTGTAGGCCTGTGCTTCCAGGAGCCAGAGAG---------------------------------------ATGTCCAGGTAAAATTCCTAGCCACTTCCAGGCCCTGGCT-ACCAGGGAGAGGCAAAGCAGTGGCAGAGCA------------------------------------------------------- i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73303050 880 - 125196307 CTCCTCTACTGTCACT-GTGGTTATTTacagtaaac---tttttaaa-----aacaggcaaaacaaaaactaacatcAAGCTGGGTTGTCAACAaaagcctccaaagtagctgtcAACAAAAGCTTCCAATGCAGTTCTAACCTTGTGCAGTTGTTCTTCTGGACTCAAAAGCAAAGCTGTCAACTCTCCCGTGACCTCAGGCTTTCCTTACCCAAGTCTGGCAACCCCTGGAGAAGGAGGcagattttccttttcctttt-gtgttcAGGATCAGATTTCAGAGGTAAAGGATTTGGTTTGGACTAAAATG-----CCCCAAAAGAGGAAGACACCAGACCAGGAACAGGCTCTGGATGGTGGACAAAGAGCAGCCGGT----GGCTGCTCTTTTCACCCCCATTTTATAAAGGAGGCAACAGCAAGACGCAG-CCTGGCTT-AGGAGGAAgctggagaaaggagagaaggaaacaggACAGAAGGAAGGGGCTCAGAGCCATGCCAACACAACCCATCACAGTCTCCAGCCATGAAGACCTCGGGGCAGCCAGCCTCCTTTTGATCTGGGTGTAAGAAGGAGGACAGAAGGG---AGTGTCCCCATCACAGGAATCCTCAGCTCCTTGTGTCAGTTGCCCTAGCTGCTACTGTCACT-------ACCACCGAGGCTCAGCAAATGGACTGGCAGCTAGGTGGATTTCTCAGCCACCACCCTTTGTCCTGGGCTCCCTCACTGTCATGCTCCCACT-------GAGGTGCCTCCTTGGTC----TTACAGCTGGGCAGGTCTCATCTTTGCTTCTAGGCCCTGTAGGCCTGTGCTTCCAGGAGCCAGAGAC---------------------------------------ATGTCCAGGTAAACTTCCTAGCCACTTCCAGGCCCTGGCT-ACCAGGGAGAGGCAAAGCAGTGGCAGAGCA------------------------------------------------------- i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72135764 872 - 125710982 CTCCTCTGCTGTCACT-GTGGTTATTTACAGTAAAC---TTTTTAAA-----AACAGGCAAAACAAAAACAAACGTCAAGCTGGGTTGTCAACAAAAGCCTCCAAAGCAGCTGTCAACAAAAGCTTCCAATGCAGTTCTAACCTTGTGCAGTTGTTCTTCTGGACTCAAAAGCAAAGCTGTCAACTCTCCCATGACCTCAGGCTTTCCTTACCCAAGTCTGGCAACCCCTGGAGGAGGAAGCAGATTTTCTTTTTCCTTTT-GTGTTCAGGATCAGATTTCAGAGGTAAAGGATTTGGTTTGGACTAAAATG-----GCCCAAAATAGGAAGACACCAGACCAGGAGCTGGCTCTGGATGGTGGACAAAGAGCAGC--------------------CACCCCCATTTTATAAAGGAGGCAACAGCAAGACGCAGCCCTGGCTT-aggaggaagctggagaaaggagagaaggaaacaggacagaaggaAGGGGCTCAGAGCCATGCCAACACAACCCATCACAGTCTCTAGCCATGAAGACCTCGGGGCAGCCAGCCTCCTTCTGACCTGGGTGTAAGAAGGAGGACAGAAGGG---AGTGTCCCCATCACATGAATCCTCAGCTCCTTGTGTCAGTTGCCCTGGCTGCTACTGTCACT-------ACCACCAAGGCTCAGCAAATGGACTGGCGGCTAGGTGGATTTCTCAGCCACCACCCTTTGTCCTGGGCTCCCTCACTGTCATGCTCCCACTGACCCTGGAGGCTTCTCCTTGGTC----TTACAGCTGGGCAGGTCTCATCTTTGCTTCTAGGCCCTGTAGGCCTGTGCTTCCAGGAGCCAGAGAG---------------------------------------ATGTCCAGGTAAACTTCCTAGCCACTTCCAGGCCCTGGCT-ACCAGGGAGAGGCAAAGCAGTGGCAGAGCA------------------------------------------------------- i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75595200 913 - 121768101 CTCCTCT-CTCTCACT-GTGGTTATTTACAGTAAACATTTTTTTAAA-----AACAGGCAAAAC-------------AAGCTGGGTTGCCAACAAAAGCC-------------------------TCCAATGCAGTTCTAACCT-GTGCAGTAGCTCTTCTGGACTCTAATGCAAAGCTGTCAACTCTCCTGTGACCTCAGCCTTTCCTCTCCCAAGTCTGGCAGCCACTGAAGAAGAAGGCAGATTGTCCTTCTCCTTGTGGTGTTCAGGATGAAATTTCAGAGGTAAGGAATTTGGTTTGGACTTAAATG-----GCCCAAAATAGGAAGACTCCAGACCAGGAGCAGGCTCTGGATGGTGAACAAAGAGCAGCCACCACTGGGCTGCTGTTTTCACCCTGATTTTGTAAAGAAGGCAACAGAAAGATGCAGCCCTGGCTTAACAAAGAAGCTGGAGAAAGGAAAGAAGGAAGCAGGATAGAAGGAAGAGGCTCAGAGCCATCCCAACACAACCTATCTCAGTCTCCAGCCATGAGGACCTGAAGGCAGCCAGCCTCTCTCTCACCTGAGTGTGAGAAGGAGGGCAGAAGAATCCTGGGTCTCCATCACAGGAATCCTCAGCTCCTTGTGCCAGTTGCCCTGGCTGCTACGGTCACC-------AGCACCGAGGCTCAGCAAACGGCCTGGCAGCTGGGTGGACTTCTCAGCCACCACCCTTTGTCCTGGGCACC-TCACTGCCATGCTCCTGCTGACCCTGGAGGTACCTCCTCCATC----TTACAGCTGAGCAGCTCTCAGCTTTGCTTCCAAGCCCTGTAGACCTGTGCTTCCAGAAGCCAGAGAG---------------------------------------ATGTCTCTGTAAACTTCCTGGCCACCTCCAGGCTCTAGCT-GCCAGGGAGAGGCGAAGCAGTGGCAGAGCACAGCCATCA-GAGCACTAAGTCATCCTCACCTACAACCCAGGACAGCCAGAGTGA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27751822 781 + 88276631 cctctctg-tgtctctcatgcataaata-aataaaa---tctttaaaaaaaTAACAAGCAAAATAATAACTAAGCCCAAG-TGAGTTGTCCACAGGAACCTCAGACGTCCTTCCCTCCAC---TCTCCAAT----------CCCTGCACAGCTGTACTTTGGGAATCAAAAGCAAAACTGTCCACTCGCCC-TGACTTCACTCCTTCCTCTTTCCACTCTGGAACCCACTCCA--AGAAGGCAGATTCTTTCTTCCTTTCT-GTGTCCAGGATGGGG-CTCATGGGTAAGGGACTTAGATGGTACAAAAATGGGGGTGCCTTAGA---GATGCCAGGAGAGCAGCCACGGGCCCGGGGTTTTGGGCA---AAGAGCCATC-------------TGTCACT---------------GGGC----------------CTCGGCGT-------------GA-----GAGTGTCGGCAGCAG-------------------------------CAGAATCC------------------------------------------------------------GCAGGGAGACAGGGCAG---GCCCCTTTCTCCACAGGAGTCCT-GGCTCTGCCTCCCGGTCACCAGGGCTGGTGCGGCCACCTCCACAGACCACTGAGGCTTAGTGAGCTGCTTGACAGCTGGGT---CATCTTGGCCGGAAACCCGTGTCCTTAGCTCCCTCGCCACCGCACTCCAGCTCA-----AGGCCGCCCCCGCTGTCTTATTTACAGCTGGACAAATCACAGCTCTGCTCCGGAGCCCTGTGGGCCCATG--TGCCAGAGCCGAGGAGGAAACTGGTACCGGTCAGACGTGGGCAGGTGGAGGGGCCGTGCCCAGGTAAGCTCCCTGGCTCCCTCCAGGCCCTGGCTCGCAGGGGAGGAGCAAAGCAGCGGCAGGACACGGTCGTCAGGAGCAG--------------------------------------- i canFam3.chr4 I 153 C 0 e mm10.chr14 24195292 2599 + 124902244 I a score=142310.000000 s hg38.chr10_KI270825v1_alt 103119 51 + 188315 CAGTCATCAGAGCACCACGTCATCCTCACCTACAACTCAGGACACCCAGAG s panTro4.chr10 76481036 51 + 133524379 CAGTCATCAGAGCACCACGTCATCCTCACCTACAACTCAGGACACCCAGAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76143544 51 - 133410057 CAGTCATCAGAGCACCACGTCATCCTCACCTACAACTCAGGACACCCAGAG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35085289 51 + 104879549 CAGTCATCAGAGCACCACATCATCCTCACCTACAACTCAGGACACCCAGAG i nomLeu3.chr18 T 54 I 3 s rheMac3.chr9 73879574 51 - 130959383 CAGTCATCAGAGCACCAAGTCATCCTCACCTACAACTCAGGACACCCACAG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75440244 51 - 133195287 CAGTCATCAGAGCACCAAGTCATCCTCACCTACAACTCAGGACACCCACAG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73303930 51 - 125196307 CAGTCATCAGAGCACCAAGTCATCCTCACCTACAACTCAGGACACCCACAG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72136636 51 - 125710982 CAGTCATCAGAGCACCAAGTCATCCTCACCTACAACTCAGGACACCCACAG i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27752603 49 + 88276631 CAGCAAGCAAA--ACCAAGCCCCCCTCATCTGCAGCCCAAGAGAGCCAGAG i canFam3.chr4 C 0 C 0 e mm10.chr14 24195292 2599 + 124902244 I e calJac3.chr12 75596113 0 - 121768101 C a score=7483.000000 s hg38.chr10_KI270825v1_alt 103170 3 + 188315 CCG s panTro4.chr10 76481087 3 + 133524379 CCG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76143595 3 - 133410057 CCG i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73879625 3 - 130959383 CCG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75440295 3 - 133195287 CCG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73303981 3 - 125196307 CCG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72136687 3 - 125710982 CCG i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27752652 3 + 88276631 CCA i canFam3.chr4 C 0 C 0 e mm10.chr14 24195292 2599 + 124902244 I e nomLeu3.chr18 35085340 3 + 104879549 I e calJac3.chr12 75596113 0 - 121768101 C a score=1675188.000000 s hg38.chr10_KI270825v1_alt 103173 515 + 188315 TCCAGGAAAGACCCAGGCCCTGCCTGGGGTGAACGAGTGCTTCTTAAagcacctaagcttcactagagaacctgct--------------aggcaaaatttcaggtcccacccagacccactgaatcagaaaccctgggagtaagtccctgcagcactccgtgtggtaaaagccctccgggtgattccgatgcctgctagagtttgagaacctctgTTCCAGACCAAAGTTGCATTTG--------------CATATTTCTCCTTTGTTTTACTGGCTATCCAGCAGCCACTGCCTTTAAAGAAATCCCCCACTGATG--------------------TCCTTGACAATGAAGGCCTAAG----GGGGACACCCCT-CTTAGTCAATGAGTACATGACTCCAGTTCAG-CGTTTCCCCAGCTTGGAGTGAAAGGAGGTTAGATTCCAATGCTGGAAGCCCAGGCCCCAgatctccagccagatcaaagacttgctttcga-----acccttgactcagggtctg----gttttcag-aacccaaaccaCCATAAGCAG---CCATGGCCAACTACTTCCCAG s panTro4.chr10 76481090 515 + 133524379 TCCAGGAAAGACCCAGGCCCTGCCTGGGGTGAACGAGTGCTTCTTAAagcacctaagcttcactagagaacctgct--------------aggcaaaatttcaggtcccacccagatccactgaatcagaaaccctgggagtaagtccctgcagcactccgtgtggtaaaagccctccgggtgattccgatgcctgctagagtttgagaacctctgTTCCAGACCAAAGTTGCATTTG--------------CATATTTCTCCTTTGTTTTACTGGCTATCCAGCAGCCACTGCCTCTAAAGAAATCCCCCACTGATG--------------------TCCTTGACAATGAAGGCCTAAG----GGGGACACCCCT-CTTAGTCAATGAGTACATGACTCCAGTTCAG-CGTTTCCCCAGCTTGGAGTGAAAGGAGGTTAGATTCCAATGCTGGAAGCCCAGGCCCCAgatctccagccagatcaaagacttgctttcga-----acccttgactcagggtctg----gttttcag-aacccaaaccaCCATAAGCAG---CCATGGCCAACTACTTCCCAG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76143598 529 - 133410057 TCCAGTAAAGACCCAGGCCCTGCCTGGGGTGAACGAGTGCTTCTTAAagcacctaagcttcactacagaacctgct--------------aggcaaaatttcaggtcccacccggacccactgaatcagaaaccctgggagtaagtccctgcagcactccgtgtcgtaaaagccctccgggtgattccgatgcctggtagagtttgagaacctctgTTCCAGACCAAAGTTGCATTTGCTGGCCAGAGTGGACTTATTTCTCCCTTGTTTTACTGGCTATCCAGCAGCCACTGCCTTTAAAGGAATCCCCCGTTGATG--------------------TCCTCAACAATGAAGGCCTAAG----GGGGACACCCCT-CTTAGTCAATGAGTACATGACTCCAGTTCAG-CGTCTCACCAGCTTGGAGTGAAAGGAGGTTAGATTCCAATGCTGCAAGCCCAGGCCCCAGATCTCTAGccagatcaaagacttgctttcga-----acccttgactcagggtctg----gttttcag-aacccaaaccaCCATAAGCAG---CCATGGCCAACTACTTCCCAG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35085343 529 + 104879549 TCCAGGAAAGACCCAGGCCCTGCCTGGGGTGAATGAGTGCTTCTTAAagcacctaagcttcactagagaacctgct--------------aggcaaaatttcaggtcctacctggacccactgaatcagaaaccctgggagtaagtccctgcagcactctgtgtcgtaaaagccctccgggtgattccgatgcctggtagggtttgagaacctctgTTCCAGACGAAAGTTGCATTTGCTGACCAGAGTGGACTTATTTCTCCCTTGTTTTACTGGCTATCCAGCAGCCATTGCCTTTAAAGGAATCCCCCGTTCATG--------------------TCCTCAACAATGAAGGCCTAAG----GAGGGCACCCCT-CTTAGTCAATGAGTACGTGACTCCAGATCAG-TGTTTCCCCAGCTTGGAGTGAAAGGAGGTTAGATTCCAATGCTGCAAGCCCAGGCCCCAgatctccagccagatcaaagacttgctttcga-----acccttgactcagggtctg----gttttcag-aacccaaaccaCCATAAGCAG---CCATGGCCAACTACTTCCCAG i nomLeu3.chr18 I 3 C 0 s rheMac3.chr9 73879628 530 - 130959383 TCCAGGAAAGACCCAGGCCTTGCCTGGGGTGAACGAGTGCTTCTTAAagcacctaagtttcactagagaacctgct--------------aggcaaaatttcaggtcccacctggacccactgaatcagaaaccctggcagtaagtccctgcagcactccgtgttgtaaaagccctccgggtgattctgatgcctggtacagtttgagaacctctgTTCCCGGCCAAAGTTGCATTTGCTGGCCAGAATGGACTTATTTCTCCCTTGTTTTACTGGCTATCCAGCAGCCACTGCCTTTAAAGGAATCCCCCATTGATG--------------------TCATCAACAATGAAGGCCAAAG----GGGGACACTCCTCCTTAGTCAATGAGTACGTGACTCCAGATCAG-TGTTTCCCCAGCTTGGAGTGAAAGGAGGTTAGATTCCATTGCTGCAAGTCCAGGCCCCAgatctccagccagatcaaagacttgctttcga-----acccttgactcagggtctg----cttttcag-aacccaaaccaCCATAAGCAG---CCATGGCCAGCTACTTCCCAG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75440298 530 - 133195287 TCCAGGAAAGACCCAGGCCTTGCCTGGGGTGAACGAGTGCTTCTTAAagcacctaagtttcactagagaacctgct--------------aggcaaaatttcaggtcccacctggacccactgaatcagaaaccctggcagtaagtccctgcagcactccgtgttgtaaaagccctccgggtgattctgatgcctggtacagtttgagaacctctgTTCCCGACCAAAGTTGCATTTGCTGGCCAGAATGGACTTATTTCTCCCTTGTTTTACTGGCTATCCAGCAGCCACTGCCTTTAAAGGAATCCCCCATTGATG--------------------TCATCAACAATGAAGGCCAAAG----GGGGACACTCCTCCTTAGTCAATGAGTACGTGACTCCAGATCAG-TGTTTCCCCAGCTTGGAGTGAAAGGAGGTTAGATTCCAATGCTGCAAGTCCAGGCCCCAgatctccagccagatcaaagacttgctttcga-----acccttgactcagggtctg----cttttcag-aacccaaaccaCCATAAGCAG---CCATGGCCAGCTACTTCCCAG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73303984 530 - 125196307 TCCAGGAAAGACCCAGGCCTTGCCTGGGGTGAACGAGTGCTTCTTAAAGCACCTAAGTTTCACTAGAGAACCTGCT--------------AGGCAAAATTTCAGGTCCCACCtggacccactgaatcagaaaccctgGCAGTAAGTCCCTGCAGCACTCCGTGTTGTAAAAGCCCTCCGGGTGATTCTGATGCCTGGTACAGTTTGAGAACCTCTGTTCCCGACCAAAGTTGCATTTGCTGGCCAGAATGGACTTATTTCTCCCTTGTTTTACTGGCTATCCAGCAGCCACTGCCTTTAAAGGAATCCCCCGTTGATG--------------------TCATCAACAATGAAGGCCAAAG----GGGGACACCCCTCCTTAGTCAATGAGTATGTGACTCCAGATCAG-TGTTTCCCCAGCTTGGAGTGAAAGGAGGTTAGATTCCAATGCTGCAAGTCCAGGCCCCAGATCTCCAGCCAGATCAAAGACTCGCTTTCAA-----ACCCTTGACTCAGGGTCTG----CTTTTCAG-AACCCAAACCACCATAAGCAG---CCATGGCCAACTACTTCCCAG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72136690 530 - 125710982 TCCAGGAAAGACCCAGGCCTTGCCTGGGGTGAACGAGTGCTTCTTAAagcacctaagtttcactagagaacctgct--------------aggcaaaatttcaggtcccacctggacccactgaatcagaaaccctggcagtaagtccctgcagcactccatgttgtaaaagccctccgggtgattctgacgcctggtacagtttgagaacctctgTTCCCGACCAAAGTTGCGTTTGCTGGCCAGAATGGACTTATTTCTCCCTTGTTTTACTGGCTATCCAGCAGCCACTGCCTTTAAAGGAATCCCCCGTTGATG--------------------TCATCAACAATGAAGGCCAAAG----GGGGACACCCCTCCTTAGTCAATGAGTATGTGACTCCAGATCAG-TGTTTCCCCAGCTTGGAGTGAAAGGAGGTTAGATTCCAATGCTTCAAGTCCAGGCCCCAGATCTCTAGccagatcaaagacttgctttcga-----acccttgactcaggctctg----cttttcag-aacccaaaccaCCATAAGCAG---CCATGGCCAATTACTTCCCAG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75596113 539 - 121768101 TCCAGGAAAGACCCAGTCCCTGCCTGGGGTGAACCAGTACTTCTTAAAGCACCTAAGCTTCACTAGAGAACCTAATTTTGctttctaataaagcaaaatttcaggtcccacatggacccactgaaccagaaattctgggcgtgaggccttgcagcactctgcattgtaaaagccctccaggtgattctgatgcttggtaaagtttgaaaacctctgTTCCAGACCAAAGTTGCATTTGCTGGCCAGAGTGGACTTATTTCTCCCTTGTTTTACTGGCTATCCAGCAGCCACTGCCTTTAAAGGAATCCCCCACTGATG--------------------TCCTCAATGATGAAGG-----G----GAGGACACCTCCCCTTAGTCAATGAGTACATGACTCCAGCTCAGCTCTTTCCCCAGCTTGGAGTGAAAGGAGATGAGATTCCAATGCAGCAGGCCCAGGCACCAGCTCTCCAGCCGGATCAAAGacttgctttcga-----acccttgactcagggtctg----cttttcagaaacccaaaccaaCATAAGCAG---CAATGGCCAActgcttcc--a i calJac3.chr12 C 0 C 0 s canFam3.chr4 27752655 486 + 88276631 -TCGGGAGAGACACAGTTCCT---CGTCGTAAACCAGTGCTTCTGAAAGCACCGTAGTGTCAC----GAACTTGTT--------------AG---AAAC-----GTCCCTCTCGGG---GCTAATTCCGAAACCCAGGAAGTGGAGT----CAGCACTC-------------CTGtccaggtgattctgatgcctgctcgagtctgagaacctctgGCCCTGGCCAGAG--------------------GGGCTTTTTCCTCCCCCGTTTTACTGGCTGGCCTGCAGCCACTACAGCTAAGGGCACTGCCCACAGACGACACGCAGGGAGGGCCCCTTCCCCTAACTGTGGAAGCCCGGGGGGTGGGGATGGCCCC-CCAGGTCAGTCAGTACAGGACGGAGGCCCAG-CTCCTCCC--------------AGGA---------CTGACGGTGCAGGCTGCGGCCAC-GCCCCGCGTccaggtaaagcacttgccctcaaatcagatccttgactcaaggtctgctcactctgcagaaaccggaaccaagaGAGGCGGTGATGATGGCCTATCGCCTCCTCA i canFam3.chr4 C 0 I 187 e mm10.chr14 24195292 2599 + 124902244 I a score=580720.000000 s hg38.chr10_KI270825v1_alt 103688 181 + 188315 CTGCATCT-AGTCCAGAGCacttttcctggaaggcccagtccaagggcca-cttcctccaggaagctttctgtgattccccTCATCAGAACTAACTGCTTCTTCCCTTGAGTTACTTCTTTCTTTCTGCTCTACACAGAACAGAATAGCCAGTCGTGCCAGACAGTGCCTGTCTCCCTGGCAG s panTro4.chr10 76481605 181 + 133524379 CTGCATCT-AGTCCAGAGCACCTTtcctggaaggcccagtccaagggcca-cttcctccaggaagctttctgtgattccccTCATCAGAACTAACTGCTTCTTCCCTTGAGTTACTTCTTTCTTTCTGCTCTACACAGAACAGAATAGCCAGTCGTGCCAGACAGTGCCTGTCTCCCTGGCAG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76144127 182 - 133410057 CTGCGTCTGAGTCCAGAGCACCTTtcctggaaggcccaattcaagggcca-cttcctccaggaagctttctgtgattccccTCATCAGAACTAACTGCTTCTTCCCTTGAGTTACTTCTTTCTTTCTGCTCTACACAGAGCAGAATAGCCAGTCATGCCAGACAGTGCCTGCCTCCCTGGCAG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35085872 182 + 104879549 CTGCGTCTGAGTCCAGAGCACCTTtcctggaaggcccaattcaagggcta-cttcctcgaggaagctttctctgattccccTCATTAGAACTAACTGCTTCTTCCCTTGAGTTACTTCTTTCTTTCTGCTCTACACAGAGCAGAATAGCCAGTCGTGCCAGACAGTGCCTGTCTCCCTGGCAG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73880158 180 - 130959383 CTGCGTCTGAGTCCAGAGCACCTTtcctagaaggcccaactcaagggcca-cttcctccaggaaactttctctgattcaccTCATCAGAACTAACTGCTTCTTCCC--GGGTTACTTCTTTCTTTCTGCTCTACACAGAGCAGAACAGCCAGTCGTGCCAGACAGTACCTGTCTCCCTGGCAG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75440828 180 - 133195287 CTGCGTCTGAGTCCAGAGCACCTTtcctagaaggcccaactcaagggcca-cttcctccaggaaactttctctgattcaccTCATCAGAACTAACTGCTTCTTCCC--GGGTTACTTCTTTCTTTCTGCTCCACACAGAGCAGAACAGCCAGTCGTGCCAGACAGTACCTGTCTCCCTGGCAG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73304514 180 - 125196307 CTGCGTCTGAGTCCAGAGCACCTTTCCTAGAAGGCCCAATTCAAGGgcca-cttcctccaggaaactTTCTCTGATTCACCTCATCAGAACTAACTGCTTCTTCCC--GAGTTACTGCTTTCTTTCTGCTCTACACAGAGCAGAATAGCCAGTCGTGCCAGACAGTACCTGTCTCCCTGGCAG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72137220 179 - 125710982 CTGCGTCTGAGTCCAGAGCACCTTtcctagaaggcccaattcaagggcca-cttcctccagg-aactttctctgattcaccTCATCAGAACTAACTGCTTCTTCCC--GAGTTACTTCTTTCTTTCTGCTCTACACAGAGCAGAATAGCCAGTCGTGCCAGACAGTACTTGTCTCCCCGGCAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75596652 182 - 121768101 ttgtgtctgagtccaaagcacctcttctggaaggcctatttcaaaggtca-cttcctccaggaagttttctctgattcccctcatcagaactaactgttccttcccctgagttACTTCTTTCCTTCTGCTGTACACAGGGCAGAAAGGCAAGTCATGCCAGACAGGACCTGTCTCCCTGGCAG i calJac3.chr12 C 0 C 0 s canFam3.chr4 27753328 171 + 88276631 CTGCTCCTACTTCTGAAGCAACATATCTAGAAGGCTCA-CACAAGGACCACCTCCCTCCTTGAAACTTACTGTCA--CCCCGCATCAGAAATAGCTGCCTCCTCCCCTGAGCTATTTGGTTCCTTCTGTTTTATATTCGGCACAAAGGCCGGTCGT---------CGCTTTCCTCTCTGGtgc i canFam3.chr4 I 187 I 365 e mm10.chr14 24195292 2599 + 124902244 I a score=394447.000000 s hg38.chr10_KI270825v1_alt 103869 129 + 188315 TGTGATAACATTTGGGGCCGTG-TTCACCGTGATCCCTATGAGTACCAAACACCTGCCCCACAAGGAGGAGGCATTCCCAT--CTCTGATAAATTGGCTTTGCAAAGGATTACCCCTGACCCAAAAGTCTGG s panTro4.chr10 76481786 129 + 133524379 TGTGATAACATTTGGGGCCGTG-TTCACCATGATCCCTATGAGTACCAAACACCTGCCCCACAAGGAGGAGGCATTCCCAT--CTCTGATAAATTGGCTTTGCAAAGGATTACCCCTGACCCAAAAGTCTGG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76144309 129 - 133410057 TATGATAACATTTGGGGCTATG-TTCACCGTGATCCCTATGAGTACCAAACACCTGCCCCACAAGGAGGAGGCATTCCCAT--CTCTGATAAATTGGCTTTGCAAAGCGTTACCCCTGATCCAAAAGTCTGG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35086054 128 + 104879549 TGTGATAACATTCAGGGCCACA-TTCACCGTGATCCCTATGAGTACCAAACACCTGCCCCACAAGGAGGAGGCATTCCCAT--CTCTGATAAATTGGCTTTGCAAAGGGTTA-CCCTGATCCAAAAGTCTGG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73880338 129 - 130959383 TGTGATAACATGAGGGGCCATG-CTCACCGCGATCCTTATAAGTACCAAACACCTGCCCCACGAGGAGGAGGCATTCCCAT--CTCTGTTAAATTGGCTTTGCAAACAGTTATCCCTGATCCAAAAGTCTGG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75441008 129 - 133195287 TGTGATAACATGAGGGGCCATG-CTCACCGCGATCCTTATAAGTACCAAACACCTGCCCCACGAGGAGGAGGCATTCCCAT--CTCTGATAAATTGGCTTTGCAAACAGTTATCCCTGATCCAAAAGTCTGG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73304694 129 - 125196307 TGTGATAACATTAGGGGCCATG-CTCACCGCGATCCCTATGAGTACCAAACACCTGCCCCACGAGGAGGAGGCATTCCCAT--CTCTGATAAATTGGCTTTGCAAACGGTTATCCCTGATCCAAAAGTCTGG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72137399 129 - 125710982 TGTGATAACATTAGGGGCCATG-CTCACTGCGATCCCTATGAGTACCAAACACCTGCCCCACGAGGAAGAGGCATTCCCAT--CTCTGATAAATTGGCTTTGCAAACAGTTATCCCTGATCCAAAAGTCTGG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75596834 130 - 121768101 TGTGATAACATTAGGGGCCGTGCCTCACCGTGATCCCTAAGAACACCAAAAACCTGCCCCACCAGTAGGAGGCATTCCCAC--TTCTGAAAAACTGATTTTGCAAAGGGTTACCCCTGATTCAAAAGTCTGG i calJac3.chr12 C 0 C 0 s canFam3.chr4 27753864 120 + 88276631 TGTGAGAGCA---GGGGCCAGGGCTCTCTGTGA-CCCTGCACGCA-CAAGCACATG-CCCAAGAGAAGAAGGTGCTCCCATTGTTTGGAAGAACTGA----GAAAACAG--GCCCCTGATCCAAAGGCCCAG i canFam3.chr4 I 365 C 0 e mm10.chr14 24195292 2599 + 124902244 I a score=1826798.000000 s hg38.chr10_KI270825v1_alt 103998 528 + 188315 GCCAGGAATGAAGGATCAGAGGTCACAGGGCGTCAGT-GGCAGCCCCCACTTCCCTGATGGCTCACCCCACCTTCCCCTGTCAACCAGAAGAAGCACTTTCAAGGAATCTTCCCTGGGATATGAGAGAAGCCCTCCAGCAATTTCTCCTGCCGATAAG-CCTGGA---GACCTCTCCATTTAATAAGAAA--TCTTCTGCTATTTCAATCTTCATGGAATTTAAGGCTGGCTTTATAAGTGCTGCCCAAGAATGTCTCTTCTCCTCCTTAAAACCTCCCCAGTTTTCCAAGATGAGAAATAAAAGGCTACTGAGAAATTAGGTCAGGATGAATGGGGAGG-AAAAAAGTACTGATTGCCTGAAACGAGTGTGCAGTCCCCAGGCAGATCCACCAGGTAGGGTCGGGGGCAGGTCA-------CAACAACAGGC-GCAGGAAGCGGG---GGAGGGCCTCGGGGAAGCTGTGTGTGCTTAGCTG----------ATGAAAACTG--CCCGAGGAGGCCT-TGGCACAAAGACCTGCTGCCTTTAAGGCTGTTGGCAAAGGT s panTro4.chr10 76481915 529 + 133524379 GCCAGGAATGAAGGATCAGAGGTCACAGGGCATCAGT-GGCAGCCCCCACTTCCCTGATGGCTCACCCCACCTTCCCCTGCCAACCAGAAGAAGCACTTTCAAGGAATCTTCCCTGGGATATGAGAGAAGCCCTCCAGCAATATCTCCTGCCGATAAG-CCTGGA---GAACTCTCCATTTAATAAGAAA--TCTCCTGCTATTTCAATCTTCATGGAATTTAAGGCTGGCTTTATAAGTGCTGCCCAAGAATGTCTCTTCTCCTCCTTAAAACCTCCCCAGTTTTCCAAGATGAGAAATAAAAGGCTACTGAGAAATTAGGTCAGGATGAATGGGGAGGAAAAAAAGTATTGATTGCCTGAAACGAGTGTGCAGTCCCCAGGCAGATCCACCAGGTAGGGTCGGGGGCAGGTCA-------CAGCAACAGGC-GCAGGAGGCGGG---GGAGGGCCTCGGGGAAGCTGTGTGTGCTTAGCTG----------ATGAAAACTG--CCCGAGGAGGCCT-TGGCACAAAGACCTGCTGCCTTTAAGGCTGTTGGCAAAGGT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76144438 538 - 133410057 GCCAGGAATGAAGGATCAGAGGTCACAGGGTGTCAGTGGGCAGCCCCCGCTTCCCTGATGGCTCACCCCACCTTCCCCTGTCAACCAGAAGAAGCACTTTCAAGGAATCTTCCCTGGGATACGAGGGAAGCCCTCCAGCAATTTCTCCTGCCGATAAG-CCTGGA---GACCTCTCCATTTAATAAGAAA--TCTCCTGCTATTTCAATCTTCATGGAATTTAAGGCTGGCTTCACAAGTGCTGCCCAAGAATGTCTCTTCTCCTCCTTAAAACCTCCCCAGTTTTCCAAGATGAGAAATAAAAGGCTACTGAGAAATTAGGTCAGGATGAATGGGAAGG-AAAAAAGTATTGATTGCCTGAAACGAGTGTGCAGTCCCCAGGCAGATCCACT-GGTAGGGTCCGGGGCAGGTCA-------CAACAACAGGC-GCAGGAGGCGGG---GGAGGGCCTCGGGGAAGCTGTGTGTGCTTAGCTGATGAAAACCCATGAAAACTG--CCCGAGGAGGCCT-TGGCACAAAGACCTGCCGCCTTTAAGGCTGTTGGCAAAGGT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35086182 535 + 104879549 GCCAGGAATGAAGGATCAAAGGTCACAGGGCGTCAGTGGGCAGCCCCCACTTCCCTGATGGCTCACCCCACCTTCCCCGGTCAACCAGAAGAAACACTTTCAAGGAATCTTCCCTGAGATACGAGGGAAGCCCTCCAGCTCTTTCTCCTGCCAATAAG-CCTGGA---GACCTCTCCATTTAATAAGAAA--TCTCCTGCTATTTCAATCTTCATGGAATTTAAGGCTTGCTTTACAAGTGCTGCCCAAGAATGTCTCTT---CTCCTTAAAATCTCCCCAGTTTTCCAAGATGAGAAATAAAAGGCTACTGAGAAA-TAGGTCAGGATGAATGGGGAGG-AAAAAAGTATTGATTGCCTGAAACGAGTGTGCAGTCCCCAGGCAGATCCACCGGGTAGGGTCGGGGGCAGGTCA-------CAACAACAGGT-GCAGGAGGCGGG---GGAGGGCCTCGGGGAAGCTGTGTGTGCTTAGCTGATGAAAACCCATGAAAACCG--CCCGAGGAGGCCT-TGGCACAAAGACCTGCCGCCTTTAAGGCTGTTGGTAAAGGT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73880467 538 - 130959383 GCCAGGAATGAAGGATCAGAGGTCACAGGGCGTCAGTGGGCAGCCCCCACTTCCCTGATGGCTCACCCCACCTTCCCCTGTCAACCAGCAGAAGCACTTTCAAGGAATCTTCCCTGGGATACGAGAGAAGCCCTCCAGCTCTTTCTCCTGCCAATAAG-CCTGGA---GACCTCTCCATTTAGTAAGACA--TCTCCTGCTATTTCAATCTTCATGGAATTTAAGGCTCGCTTTACAAGAGATGCCCAAGAATGTCTCTTCTCCTCCTTAAAACCTCCCCAGTTTTCCAAGATGAGAAATAAAAGGCTACTGAGAAATTAGGTCAGGATGAATGGGGAGG-AAAACAGTATTGATTGCCTGAAACTAGTGCGCAGT-CCCAGGCAGATCCACAGGGTAGGGTCGGGGGCAGGTC----------ACAACAGGC-GCAGGAGGCGGGGGAGGAGGGCCTCAGGGAAGCTGTGTGTGCTTAGCTGATGAAAACCCATGAAAACTG--CCCGAGGAGGCCT-TGGCACAAAGACCTGCCACCCTCAAGGCTGTTGGCAAAGGT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75441137 541 - 133195287 GCCAGGAATGAAGGATCAGAGGTCACAGGGCATCAGTGGGCAGCCCCCACTTCCCTGATGGCTCACCCCACCTTCCCCTGTCAACCAGCAGAAGCACTTTCAAGGAATCTTCCCTGGGATACGAGAGAAGCCCTCCAGCTCTTTCTCCTGCCAATAAG-CCTGGA---GACCTCTCCATTTAGTAAGACA--TCTCCTGCTATTTCAATCTTCATGGAATTTAAGGCTCGCTTTACAAGAGATGCCCAAGAATGTCTCTTCTCCTCCTTAAAACCTCCCCAGTTTTCCAAGATGAGAAATAAAAGGCTACTGAGAAATTAGGTCAGGATGAATGGGGAGG-AAAACAGTATTGATTGCCTGAAACTAGTGCGCAGT-CCCGGGCAGATCCACAGGGTAGGGTCGGGGGCAGGTCA-------CAACAACAGGC-GCAGGAGGCAGGGGAGGAGGGCCTCAGGGAAGCTGTGTGTGCTTAGCTGATGAAAACCCATGAAAACTG--CCCGAGGAGGCCT-TGGCACAAAGACCTGCCGCCCTCAAGGCTGTTGGCAAAGGT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73304823 541 - 125196307 GCCAGGAATGAAGGATCAGAGGTCACAGGGCGTCAGTGGGCAGCCCCCACTTCCCTGATGGCTCACCCCACCTTCCTCTGTCAACCAGCAGAAGCACTTTCAAGGAATCTTCCCTGGGATACGAGGGAAGCCCTCCAGCTCTTTCTCCTGCCAATAAG-CCTGGA---GACCTCTCCATTTAATAAGAAA--TCTCCTGCTATTTCAATCTTCATGGAATTTAAGGCTCGCTTTACAAGAGATGCCCAagaatgtctcttctcctccttAAAACCTCCCCAGTTTTCCAAGATGAGAAATAAAAGGCTACTGAGAAATTAGGTCAGGATGAATGGGGAGG-AAAAAAGTATTGATTGCCTAAAACTAGTGCGCAGT-CCCGGGCAGATCCACAGGGTAGGGTCGGGGGCAGGTCA-------CAACAACAGGC-GCAGGAGGCGGGGGAGGAGGGCCTCAGGGAAGCTGTGTGTGCTTAGCTGATGAAAACCCATGAAAACTG--CCCGAGGAGGCCT-TGGCACAAAGACCTGCCGCCCTTAAGGCTGTTGGCAAAGGT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72137528 541 - 125710982 GCCAGGAATGAAGGATCAGAGGTCACAGGGCGTCAGTGGGCAGCCCCCACTTCCCTGATGGCTCTCCCCACCTTCCCCTGTCAACCAGAAGAAGCACTTTCAAGGAATCTTCCCTGGGATACGAGGGAAGCCCTCCAGCTCTTTCTCCTGCCAATAAG-CCTGGA---GACCTCTCCATTTAATAAGAAA--TCTCCTGCTATTTCAATCTTCATGGAATTTAAGGCTCGCTTTACAAGAGATGCCCAAGAATGTTTCTTCTCCTCCTTAAAACCTCCCCAGTTTTCCAAGATGAGAAATAAAAGGCTACTGAGAAATTAGGTCAGGATGAATGGGGAGG-AAAAAAGTATTGATTGCCTGAAACTAGTGCGCTGT-CCCGGGCAGATCCACAGGGTAGGGTCGGGGGCAGGTCA-------CAACAACAGGC-GCAGGAGGCGGGGGAGGAGGGCCTCAGGGAAGCTGTGTGTGCTTAGCTGATGAAAACCCATGAAAACTG--CCCGAGGAGGCCT-TGGCACAAAGACCTGCCGCCCTTAAGGCTGTTGGCAAAGGT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75596964 519 - 121768101 GCCAGGAAGGAAGAATCAGAGGTCATGGGGCATCAGTGGGCAGCCCCTGTTTCCCTGATGGCTCATCCCACCTTGCCCTGTCAACTAGAAGGAGCACTTTCAAGGAATCTTCCCTGGGATACAAGGGAAGCCCTCCAGCTCTTTCTCCTGCCAGTAAGTCCTGGA---GACCTCTC--------------------CTGCTATTTCAATGTTCATGGACTATAAGGCTCACTTTACAAGGGCTGCCCAAGAATGTCTCTTCTCCTGCTTAAAACCTCCCAAGTCATCCAAGATGAAAAATAAAAGGCCACTGAGAAATTAAGTCAGGATGAATGGAGA---AAAAAAATATCCATTGCCTGAAATGAGCGTGCAGTCCCCAGGCAGACCCACAGGGCAGGGTCGGGGGCAGGTCA-------CAATAACAGGC-TCAGGAGGCTGG---GGAGGGCCTCA-GGAAGCTCTATGTGCTTAGCTGATGAAAACCCATGAAAACTG--GCCGAGGAGGCCT-TGGCACAAAGACCTGCAGCCTTTAAGGCTGTTGGCAAAGGT i calJac3.chr12 C 0 C 0 s mm10.chr14 24197891 440 + 124902244 GTTGGGGAAGAAACTACTGAGGTCACAGGG--------ACTATTCCCTGCCTCCCTGCTGACTTGGCTCCTCCCCCAACGGAAGCCACATTA--CCCTTTCCAGGAACCTTCCCTGGAACACAAGGAAATCCCACCG--CACCAGTCCTTCCCACGAG-CCAAGGCTCCATCTCTCTGGTACATGAGCAG--CCTCCCACTACTTCCATCTGCAGGGAGCTGAAGG----CTTCCAAAACAGTGACTAGGAGTGTCTC----------------CTCCCGACTCTCTCAAGATGAGAAACAAGAGACTTCTGCAGAATTGGGTCAG---------------AA-------------GCCTAAGA-----GTGCA---CTAGGAGAGCTCTTCC------------GCACAGCTGA-------CAATAGGAT------------------GGGGGTCCTCAGAGAAGC--CATGTGACAAGCTG----------ATGAAAGCTATCCCCCAAGAGGCCTCCAGCAGAAGGACACCGTGGCTACCGTGATGCTGACAAAGAT i mm10.chr14 I 2599 I 730 s canFam3.chr4 27753984 512 + 88276631 ----GAAAGGAAGGGTGAGAGGGCACAAGGAGTCCGGGAGCAGAACCTGCTTCCATGATGACTCACCCCACCTTCCTGTGCCAACCAGAAGCCGTGCTTTCAAGGAATCTTCGCTGGGATACAGAGGAAGCCCTTCAGCTGCTTCTCCTGCCAACAAG-CCAAGA---GACCTCTTAGTTTAGTAAGAAACCTCTCTGGTTGCTTCAATTTGCATAAAATTTGAAGCTCATTTTATAAATGCTACTCAAGGATGTCTGTT---CTCCTTAAAACTTCCCCAGTTGTCCCAGGTGGGAGATAAAACGCACCTGAGAAATCAGGTCAGGATGAATGGGGA---AGAAAAATATCAACTGCCTGAAACGAGTGTGTGTTCCTGGGGCAGATCC----GGGAGGGCTACGCACAGGCCAGGTTACCTACGGACGGGCTGCATGGGATGGG---GGAGG-CCTCCAAGAAGCCTCA-GCACTCAGCTG----------ATGAAAAGTG--CCAGAAAAGGTGT-CAGCAGAAAGAC---------TCTAGGTTAGCTCCAGC--- i canFam3.chr4 C 0 C 0 a score=139389.000000 s hg38.chr10_KI270825v1_alt 104526 48 + 188315 GTGGCGAGTTGTGAGTAGGGCCAGGCTGGAGATCCGAGACCCGACAGA s panTro4.chr10 76482444 48 + 133524379 GTGGCAAGTTGTGAGTAGGGCCAGGCTGGAGATCTGAGACCGGACAGA i panTro4.chr10 C 0 I 341 s ponAbe2.chr10 76144976 48 - 133410057 GTGGTGAGTTGTGAGTAGGGCCAGGCTGGAGATCTGAGACCAGACAGA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35086717 48 + 104879549 GTGGCGAGTTGTGAGTAGGGCCAGGCTGGAGATCTGAGACCCAACAGA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73881005 43 - 130959383 G-----AGTTGAGAGTAGGGCCAGGCTGGAGATCTGAGACCGGACAGA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75441678 43 - 133195287 G-----AGTTGTGAGTAGGGCCAGGCTGGAGATCTGAGACCGGACAGA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73305364 43 - 125196307 G-----AGTTGTGAATAGGGCCAGGCTGGAGATCTGAGACCGGACAGA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72138069 43 - 125710982 G-----AGTTGTGAGTAGGGCCAGGCTGGAGATCTGAGACCGGACAGA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75597483 48 - 121768101 ATGGCAAATTATGAGTAGGGCCGGGTTGGAGATCTGAGACCGGACAGC i calJac3.chr12 C 0 C 0 s canFam3.chr4 27754496 47 + 88276631 GTGGTGAGCTGTTAGCAGCATCAAGCT-GAGAGCTGAGAGGGGACAGG i canFam3.chr4 C 0 C 0 e mm10.chr14 24198331 730 + 124902244 I a score=34252.000000 s hg38.chr10_KI270825v1_alt 104574 10 + 188315 CCGCCTGAGA s panTro4.chr10 76482833 10 + 133524379 CCGCCTGAGA i panTro4.chr10 I 341 C 0 s ponAbe2.chr10 76145024 10 - 133410057 CCGCCTGAGA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35086765 10 + 104879549 CCGCCTGAGA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73881048 10 - 130959383 CCGCCTGAGA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75441721 10 - 133195287 CCGCCTGAGA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73305407 10 - 125196307 CCGCCTGAGA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72138112 10 - 125710982 CCGCCTGAGA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75597531 9 - 121768101 -CCCCTAAGA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27754543 10 + 88276631 CCACCTGCAG i canFam3.chr4 C 0 C 0 e mm10.chr14 24198331 730 + 124902244 I a score=3535673.000000 s hg38.chr10_KI270825v1_alt 104584 1065 + 188315 ---GAACGCTGTCTAC--------------------------------------ACGCCCCAGGCTTCAGCCTCCAATTTCTTCTCATGCTGAATACAACCTGCCATTGTTTTCCCAGCCGTTTCCATTTAGGGAGATGTAAATGGAAAAGTGGAAGTGATGTTTTTATTATAAGGATCTTGCTCTTGCCTTTTCTCAGGTTCCT-----AAGATCA------------------------CCATGTGACCTTACCAGCGG--CCCCTCCTGCCAGGG----CGGTGTGTGCTTGCAAAGACTTCTGCCTCTCATCAGGTGTGGCTGAGCCAGCAGGAACTCCCTGGCAGGTGCTAGAGTGCTCCCAGCCAGGGCCAGCCCCACCAGGCACTCCACCCCGAGGGACTGGTACAAGCCTGGTACAGACATTCTGGTTCCCTTCTCAGGGATGAGGTTGGGCCAGCCCATCTCAAACTGGAGGGCTATTAAGCTGTAGA----------Aaccctcagcgtttctgatgcagcaggggtgggaggaggctca--aacctgcatctctaataagtgccc--------------------------cag------tggtCCAGCGACCAGGCTTTGTGAGCCACTGGTTTCGGCACAAACAAGCAGC-CAACTGTGG---TCAATGAAAGGAGGCCATACTGATGGA-CTCTGGAACAGGTTCCTTTGCTCATAAGAACCCCGC----------------CTTCTTCTTCTg----------------------------------------------ccactcaccgcagatggctacagagcacttgaaatgtggtggatttgcctg-agaaactagaaatttaaat-----ttcattttaattcatttaaatttaagtagccacctgtgtttagtggcgcccatactggacac----tgcagACctggacactgtcaggtctggatgtgatggctggagctgctgctacagacaccccgccatgagactgtgtgaagacaccacacagaggagggcagagcTGCATCCCCATGTACTGG--CTGACCTCAGCACAGCCTCA-TATGGGAGCTCATACATTTCCTGATTGGTTAAGGTGGTATGAGTGGGTGTTCCCTGCTGC----------------------------------------CTG---------------CACCCAAAGGACAATGGCAATCTCAAGCAGAAGAGCAAGAGAAGCAAAACTCGGTTCCCTGTGAACTCAAGAGGCTTTGCCCAGAAGGGATGCAACCAGTT s panTro4.chr10 76482843 1065 + 133524379 ---GAACGCTGTCTAC--------------------------------------ACGCCCCAGGCTTCAGCCTCCGATTTCTTCTCATGCTGAATACAACCTGCCATTGTTTTCCCAGCCGTTTCCATTTAGGGAGATGTAAATGGGAAAGTGGAAGTGATGTTTTTATTATAAGGATCTTGCTCTTGCCTTTTCTCAGGTTCCT-----AAGATCA------------------------CCATGTGACCTTACCAGTGG--CCCCTCCTGCCAGGG----CGGTGTGTGCTTGCAAAGACTTCTGCCTCTCATCAGGTGTGGCTGAGCCAGCAGGAACTCCCTGGCAGGTGCTAGAGTGCTCCCAGCCAGGGCCAGCCCCACCAGGCACTCCACCCCGAGGGACTGGTACAAGCCTGGTACAGACATTCTGGTTCCCTTCTCAGGGATGAGGTTGGGCCAGCCCATCTCAAACTGGAGGGCTATTACGCTGTAGA----------Aaccctcagcgtttctgatgcagcaggggtgggaggaggctca--aacctgcatctctaataagtgccc--------------------------cag------tggtCCAGCGACCAGGCTTTGTGAGCCACTGGTTTCGGCACAAACAAGCAGC-CAACTGTGG---TCAATGAAAGGAGGCCATACTGATGGA-CTCTGGAACAGGTTCCTTTGCTCATAAGAACCCCGC----------------CTTCTTCTTCTg----------------------------------------------ccagtcaccgcagatggctacagagcacttgaaatgtggtggatttgcctg-agaaactagaaatttaaat-----ttcattttaattcatttaaatttaagtagccacctgtgtttagtggcgcccatactggacac----tgcagACctggacactgtcaggtctggatgtgatggctggagctgctgctacagacaccccgccatgagactgtgtgaagacaccacacaaaggagggcagagcTGCATCCCCATGTACTGG--CTGACCTCAGCACAGCCTCA-TATGGGAGCTCATACATTTCCTGATTGGTTAAGGTGGTATGAGTGGGTGTTCCCTGCTGC----------------------------------------CTG---------------CACCCAAAGGACAATGGCAATCTCAAGCAGAAGAGCAAGAGAAGCAAAACTCGGTTCCCTGTGAACTCAAGAGGCTTTGCCCAGAAGGGATGCAACCAGTT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76145034 1063 - 133410057 ---GAACACTATCTAA--------------------------------------ACGCCCAAGGCTTCAGCCTCCGATTTCTTCTCATGCTGAATACAACCTGCCATTGTTTTCCCAGCCGTTTCCATTTAGGGAGATGTAAATGGGAAAGTGGAAGTGATGTTTTTATTATAAGGATCTTGCTCTTGCCTTTCCTCAGGTTCCT-----AAGATCG------------------------CCATGTGACCTTACCAGTGG--CCCCTCTTGCCAGGG----TGGTGTGTGCTTGCAAAGACTTCTGCCTCTCATCAGGTGTGGCTGAGCCAGCAGGAACTCCCTGGCAGGTGCTAGAGTGCTCTCAGCCAGGGCCAGCCCCACCAGGCACTCCACCCCAAGGGACTGGTGCAAGCCTGGTACAGACATTCTGGTTCCCTTCTCAGGGATGAGGTTGGGCCAGCCCATCTCAAActggagggctattaagctgtaga----------aaccctcagcctttctgatgcagcaggggtgcgaggaggctca--aacctgcctctctaatgagtgtcc--------------------------cag------tggtccagcgaccaggctttgtgagccactgGTTTCCACACGAACAAGCAGC-CAGCTGTGG---TCAATGAGAGGAGTCCATACTGACGGA-CTCTGGAACAGGTTCCTTTGCTCATAAGCAAAGGGA----------------C--CTTCTTCTg----------------------------------------------ccactcaccgcagatggctacagagcacttggaatgtggtggatttgcctg-agtaaccagaaatttaaat-----ttcattttaattcatttaaatttaagtagccacctgtggttagtggcgcccatactggacac----tgcagACCTGGACACTGTCAGGTCTGGACGCGATGGCTGGAGCTGCTGCTACAGACACCCCGCCATGAGACTGTGCGAAGACACCGCACAGAGGAGGGCAGAGCTGCATCCCCATGTACTGG--CTGACCTCAGCACAGCCTCA-TATGGGAGCTCATACATTTCCTGATTGGTTAAGGTGGTATGAGTGGGTGTTCCCTGATGC----------------------------------------CTG---------------CACCCAAAGGACAATGGCAATCTCAAGCAGAACAGCAAGAGAAGCAAAACTCGGTTCCCTGTGAACTCAAGAGGCTTTGCCCAGAAGGGATGCAAACAGTT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35086775 1065 + 104879549 ---GAACGCTGTCTAC--------------------------------------ACGCCCAAGGCTTCAGCCTCCGATTTCTTCTCATGCTGAACACAACCTGCCATTGTTTTCCCAGCCGTTTCCATTTAGGGAGATGTAAATGGGAAAGTGGAAGTGATGTTCTTATTATAAGGATCTTGCTCTTGCCTTTCCTCAGGTTCCT-----AAGATCA------------------------CCATATGACCTTACCAGTGG--CCCTTCCTGCCAGGG----CAGTGTGTGCTTGCAAAGACTTCTGCCTCTCATCAGGTGTGGCTGAGCCAGCAGGAACTCCCTGGCAGGTGCTAGAGTGCTCCCAGCCAGGGCCAGCCCCACCAGGCACTCCACCCCAAGGGACTGGTGCAAGCCTGGTACAGACATTCCGGTTCCCTTCTCAGGGATGAGGTTGGGCCAGCCCATCTCAAACTGGAGGGCTATTAAGCTGTAGA----------Aaccctcagcatttctgatgcagcagggatgagaggaggctca--aatctgcacctctaatgagtgccc--------------------------cag------tggtCCAGCGACCAGGccttgtgagccactggtttcggcacaaacaagcagc-caactgtgg---tcaatgagaggaggccatactgatgga-ctctggaacaggttcctttgctcataagaaCCCCGC----------------CTTCTTCTTCTg----------------------------------------------ccactcaccgcagatggctacagagcacttggaatgtggtggatttgcctg-agaaactagaaatttaaat-----ttcattttaattgacttaaatttaagtagccacctgtggttagtggcacccatactggacac----tgcagACctggacactgtcaggtctgaatgtgatggctggagctgctgctacagacaccccgccatgagactgtgtgaagacaccgcacagaggagggcacagcTGCATCCCCATGTACTGG--CTGACCTCAGCATAGCCTCA-TATGGGAGCTCATACATTTCCTGATTGGTTAAGGTGGTATGAGTGGGTGTTCCCTGCTGC----------------------------------------CTG---------------CACCCAAAGGACAATGGCAACCTCAAGCAGAAGAGCAAGAGAAGCAAAACTCGGTTCCCTGTGAACTCGAGAGGCTTTGCCCAGAAGGGATGCAACCAGTT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73881058 1060 - 130959383 ---GAATGCTGTCTAC--------------------------------------ACGCCCAAGGCTTCAGCCTCCGATTTCCTCTCATGCCGAATACAACCTGCCATTCTTTTCCCAGCCATTTCCATTTAGGGAGATGTAAATGGGAAAGTGGAGGTGATTTTTTTTTTAGAAGGATCTTGCTCTTGCCTTTCCTCAGGTTCCT-----AAGATCA------------------------CCATGTGACCTTACCAGTGG--CCCCTCCTGCCAGGGCAGTCAGTGTGTGCTTGT--AGAATTCTGCGTCTCATCAGGTGTGGCTGAGCCAGCAGGAACTCCCTGGCAGGTGCTGGAGTGCTC----CCAGGGCCAGCCCCACCAGGCATTCCGCCCCGAGGGACTGGTGCAAGCCTGGTACAGACATTCCGGTTCTCTTCCCAGAGATGAGGTTGGGCCAGTCCATCTCAAACTGGAGGGCTAGTAAGCTGTAGA----------Aaccctcagagtttctgatgcagcaggaatgggacgaagctca--aacctgcatctctaatgagtgtcc--------------------------cCG------TGGTCCAGGGACCAGGCTTTGTGAGCCACTGGTTTCGACACGAACAAGCAGC-CAACTGTGG---TCACTGAGAGGAGGCCATACTGAGGGA-CTCTGGAACAGGTTCCTTTGCTCATAAAAACCCCAC-------------------CTTCTCCTg----------------------------------------------ccactcaccgcagatggctacagagcacttggaatgtggtggatctgcctg-agaaactagacatttaaat-----ttcattttaattcatttaaatttaagtagccacttgtggttagtggcgcccatactggacac----tgcagACccggacactgtcaggtctggatgtgatggctggagctgccgctacagacaccccgccatgagaccgtgggaagacaacgcacagaggaggacagagTTGCATCCCCCTGTACTGG--CTGACCTCAGCACAGCCTCA-TATGGGAGCTCATACATTTCCTGATTGGTTAAGCTGGTATGAGTGGGTGTTCCCTGATGC----------------------------------------CTG---------------CACCCAAAGGACAATGGCAACCTCAAGAAGAAAAGCAAGAGAAGCAAAAATCGGTTCCCTGTGAACTCAAGAGGCTCTGCCCAGAAGGGATGCAACCACTT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75441731 1060 - 133195287 ---GAATGCTGTCTAC--------------------------------------ACGCCCAAGGCTTCAGCCTCCGATTTCCTCTCATGCCGAATACAACCTGCCATTCTTTTCCCAGCCATTTCCATTTAGGGAGATGTAAATGGGAAAGTGGAGGTGATTTTTTTTTTAGAAGGATCTTGCTCTTGCCTTTCCTCAGGTTCCT-----AAGATCA------------------------CCATGTGACCTTACCAGTGG--CCCCTCCTGCCAGGGCAGTCAGTGTGTGCTTGT--AGAATTCTGCGTCTCATCAGGTGTGGCTGAGCCAGCAGGAACTCCCTGGCAGGTGCTGGAGTGCTC----CCAGGGCCAGCCCCACCAGGCATTCCGCCCCGAGGGACTGGTGCAAGCCTGGTACAGACATTCCGGTTCTCTTCCCAGAGATGAGGTTGGGCCAGTCCATCTCAAACTGGAGGGCTAGTAAGCTGTAGA----------Aaccctcagagtttctgatgcagcaggaatgggacgaagctca--aacctgcatctctaatgagtgtcc--------------------------ccg------tggtccagggaccaggctttgtgagccactgGTTTCGGCACGAACAAGCAGC-CAACTGTGG---TCACTGAGAGGAGGCCATACTGAGGGA-CTCTGGAACAGGTTCCTTTGCTCATAAAAACCCCAC-------------------CTTCTTCTg----------------------------------------------ccactcaccgcagatggctacagagcacttggaatgtggtggatctgcctg-agaaactagacatttaaat-----ttcattttaattcatttaaatttaagtagccacttgtggttagtggcgcccatactggacac----tgcagACCCGGACACTGTCAGGTCTGGATGTGATGGCTGGAGCTGCCGCTACAGACACCCCGCCATGAGACCGTGGGAAGACAACGCACAGAGGAGGACAGAGTTGCATCCCCCTGTACTGG--CTGACCTCAGCACAGCCTCA-TATGGGAGCTCATACATTTCCTGATTGGTTAAGCTGGTATGAGTGGGTGTTCCCTGATGC----------------------------------------CTG---------------CACCCAAAGGACAATGGCAACCTCAAGAAGAAAAGCAAGAGAAGCAAAAATCGGTTCCCTGTGAACTCAAGAGGCTCTGCCCAGAAGGGATGCAACCACTT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73305417 1046 - 125196307 ---GAATGCTGTCTAC--------------------------------------ACGCCCAAGGCTTCAGCCTCCGATTTCCTCTCATGCCGAATACAACCTGCCATTCTTTTCCCAGCCATTTCCATTTAGGGAGATGTAAATGGGAAAgtggaggtgatttttttttaagaaggatcTTGCTCTTGCCTTTCCTCAGGTTCCT-----AAGCTCA------------------------CCATGTGACCTTACCAGTGG--CCCCTCCTGCCAGGG----CAGTGTGTGCTTGC--AGACTTCTGCGTCTCATCAGGTGTGGCTGAGCCAGCAGGAACTCCCTGGCAGGTGCTGGAGTGCTC----CCAGGGCCAGCCCCACCAGGCATCCCACCCCGAGGGACTGGTGCAAGCCTGGTACAGACATTCCGGTTCTCTTCCCAGAGATGAGGTTGGGCCAGCCCATCTCAAACTGGAGGGCTAGTAAGCTGTAGA----------AaccctcagagtttctgatgCACCAGGGATGGGAGGAAGCTCA--AACCTGCATCTCTAATGAGTGTCC--------------------------CCG------TGGTCCAGGGACCAGGCTTTGTGAGCCACTGGTTTCAGCACGAACAAGCAGC-CAACTGTGG---TCACTGAGAGGAGGCCATACTGAGGGA-CTCTGGAACAGGTTCCTTTGCTCATAAAAA-CCCAC-------------------CTTCTTCTG----------------------------------------------CCACTCACCGCAGATGGCTACAGAGCACTTGGAATGTGGTGGATTTGCCTG-AGAAACTAgacatttaaat-----ttcattttaattcatttaaatttaagtagccaCTTGTGGTTAGTGGCGCCCATACTGGACAC----TGCAGACCCGGACACTGTCAGGTCTggatgtgatggctggagctgCTGCCACAGACACCCCGCCATGAGACTGTGGGAAGACAACGCACAGAGGAGGACAGAGTTGCATCCCCCTGTACTAG--CTGTCCTCAGCACAGCCTCA-TATGCGAGCTCATACATTTCCTGATTGGTTAAGCTGGTATGAGTGGGTGTTCCCTGATGC----------------------------------------CTG---------------CACCCAAAGGACAATGGCAACCTcaagaagaaaagcaagagaagcAAAAATCGGTTCCCTGTGAA---------CTCTGCCCAGAAGGGATGCAAccactt i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72138122 1055 - 125710982 ---GAATGCTGTCTAC--------------------------------------ACGCCCAAGGTTTCAGCCTCCGATTTCCTCTCATGCCGAATACAACCTGCCATTCTTTTCCCAGCCATTTCCATTTAGGGAGATGTAAATGGGAAAGTGGAGGTGA-TTTTTTTTAAGAAGTATTTTGCTCTTGCCTTTCCTCAGGTTCCT-----AAGATCA------------------------CCATGTGACCTTACCAGTGG--CCCCTCCTGCCAGGG----CAATGTGTGCTTGT--AGACTTCTGCGTCTCATCAGGTGTGGCTGAGCCAGCAGGAACTCCCTGGCAGGTGCTGGAGTGCTC----CCAGGGCCAGCCCCACCAGGCATTCCACTCCGAGGGACTGGTGCAAGTCTGGTACAGACATTCTGGTTCTCTTCCCAGAGATGAGGTTGGGCCAGTCCATCTCAAACTGGAGGGCTAGTAAGCTGTAGA----------Aaccctcagagtttctgatgcagcagggatgggaggaagctca--aacctgcatctctaatgagtgtcc--------------------------ccg------tggtccagggaccaggctttgtgagccactgGTTTCGGCATGAACAAGCAGC-CAACTGTGG---TCACTGAGAGGAGGCCATACTGAGGGA-CTCTGCAACAGGTTCCTTTGCTCATAAAAACCCCAC-------------------CTTCTTCTg----------------------------------------------ccactcaccacagatggctacagagcacttggaatgtggtggatttgcctg-agaaactagacatttaaat-----ttcattttaattcatttaaatttaagcagccacttgtggttagtggtgcccatactggacac----tgcagACctggacactgtcaggtctggatgtgatggctggagttgctgctacagacaccccgccatgagactgtgggaagacaacgcacagaggaggacagagTTGCATCCCCCTATACTGG--CTGACCTCAGCACAGCCTCA-TATGGGAGCTCATACATTTCCTGATTGGTTAAGGTGGTATGAGTGGGTGTTCCCTGATGC----------------------------------------CTG---------------CACCCAAAGGACAATGGTAACCTCAAGCAGAAAAGCAAGAGAAGCAAAACTCAGTTCCCTGTGAACTCAAGAGGCTCTGCCCAGAAGGGATGCAACCACTT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75597540 1080 - 121768101 ---GAAGGCTGTCTAC--------------------------------------ACGCTCAAGGCTTTAGCCTCCAATTTCCTCTCATGCTGAAGACAACCTGCCATTC-TTTCCCAGCCATTTCCATTTAGGAAGATGTAAATGGGAAGGTGGAGGTGATGTTTTTATTATAAGGATCTTACTCTTCCCTTTCCTCACGTTCCT-----AAGGTCA------------------------CCATGTGACCTTACCAGTGACCCCCCTCCTGCCAGGG----TGCTGTGTGCTTGCAAGGACTTCTGCCTCTCATCAGGTGTGGCTGAGCCAGCAGGAACTCCCTGGCAGATGCTGGAGTGTTC----CCCGGGCCAACCCCACCAGGCATTCCACCCCAAGGGACTGGTGCAAGCCTAGCACAGACATTCCAG-TCCCTTCCCAGGGATGAGGTTAGGCCGGTCCATCTCAAACTAGAGGACTATTAAGCTGTAGG----------Aaccctcagagtttctgatgcagcaggtatggaaggaagctca--aacctgcctctct-atgagtgcccgtggtctagggtcacatatcagagatgag------tggtctagggaccaggctttgtgagccactgTTTTCAGTGCAAACAAGCTGC-CAGTTGTGG---TCAATGAGGGGAGGCCATGCTGAGGGACCTCTGGAACAGATTCTTTTGCTCATAAGGAGCTGGC-------------------CTTCTTCTg----------------------------------------------ccactcaccggagatggctacagagcacttggaatgtggtgaatttgcctg-agaaactagaaattgaaat-----ttcattttaattcatttaaatttaagt----acctgtggctaatagggcccatactggacac----tgcagCCCTGGGCACTCTCGGGTCTGGATGTGACGGCTGGAGCTGCTGCTACAGGCATCCCACCATGAGCATGCAGGAAGACACCGCACCAAGGAGGGCAGAGCCGCATCCCCACATACTGG--CTGACCTTAGCACAGCCTTA-TGTGGGAGCTCATATGTTTCCCAATTGGTTAAGGCGGCGTGAGTGGGTGTTCTCTGCTGC----------------------------------------CTG---------------CACCCAAAGGACAATGGCAACCTCAAGCAGAAGAGCAAGAGAAGCAAAAATCAGTTCTCTGTGAACTCAAGAGGCTTTGCCCGGAAGGGATGCAACCAGTT i calJac3.chr12 C 0 I 309 s mm10.chr14 24199061 991 + 124902244 ---GAAAGCGCTCTAC-----------------------------------------CTCCAGTCTTAACGTACCAAGGCCTCCTC--GGTGAATACAGCTTGCC-----CTTCACCGCTGTTT-CATCT--GGAGATG-AAGCAGGAAAGTGGAGGTGACCTCTCTATTCTAAGGACCTT-TTCTTACCTTTCCTAAGGCACACATAGAAAGACCA---------ACTAAAAGTGGGTATCCATCTGGCCTTATGGGCAC--CACCACCC-----------CACTGTGCCAATGG--CAAGCTCTGCTTCTCACTGGAAGGCACTGGCCCAGCAAGAACTGTCTAG---------------------CCATGAGGAG---AATTAGCCTGGTCTCCTCAATGGACTAAATGTAGCCCATCACAGACATTTCGCCTCTC-ACCCAAGTATGG---TGGACT-----------AACTGCAGA--TGGTCAGCCCTA---------------CCGCAGAGTTTCAGAT-CATTA----------GATGGTCAGGAACCTGGACACCTGGTGAGTACCC----------------------AGGCAGG------TGGCACAGGG-TTGGGCT---TGTGCCACAGGCATAGGGCCACATCAGTGAC---ACTGTTGCCCTCAATGAGAAAAGATCCTCCCCAGGGC-TCCTGGGGAAGGTATCTCTGATCATATGGAACCATTACAGGAACTAGTTG-TCTTGTTCATCTG---GAT--------TGTC-----acctgtgacatccaagatggaaacccctggccataggtggctacagaatcaattccatgtgactcgggtaaacg-agaaactagaaatgt-cac-----tacatttaaaggcatttatacgtaaagagccacttgg---cagtagc-tccatattggacct----cacagCTCTGGGTGCTGTCAGGTCTGGCTGTGACAGCT-AAATTGCTGTTGTAGGCAGCTCGCCATAGGCTCGAGGTCA-------------------CAAAGCCCCATCCTCAAGTAC-----CCAGCCTGATCAT-GCCTAC-TATATGAGGTCACACATTTCCTTACTGGTTAAGGGAGTGGGCGTGGGTGTTC------------------------------------------------------------------------------------AGCTGTGAACAGAAGAGAAAGAAAAGCAAATCTTGGTTC-CTGGGAGCTTGAGAGGATTGACC--ACAGGAATACGACCAGCT i mm10.chr14 I 730 C 0 s canFam3.chr4 27754553 1262 + 88276631 ACCTAACACTAGCCAGGGCAGCCCATCAGGCACCAGCCTCGCAGAAAGCACACAACACCCAAGACTTCCCCTACCAA----CTGTCATGCAGACCGTAACTTGCCATTCTTTCCCCAAATGGTGTTTGTTAAGGAGACATACGTGGGAGAGCGGAGGTGATCTTTTTATTGTAAG-ACGTTGCTCTTGCTTTGCCTTCGCTTCGTGCAGAAAGACCGTGAACCAACAGGAACAGCCAGTCTCCATCTGAC--TACAGGC----CCCCTCCCGCCAGGA----CCGCG-GTGCAGGGAAAGGGCATCACCTGTCATCAGGTGAGGCTGAGCCAGGAGGAATTCCCCAGGACGCGCCACAGTGGTCC---CCGTGGCTGACCCCACCGCTCATTCCATGCCAAGGGACAGGCCCACACCAGCCACAGACGTTCCAGTGCCCTCACCAAGGATGAAGTCAGGCCAGCCCACCTCAGAccgggaggcctgttaaatgtagatgctggaccctgctctcagagcttctgatgtaacaggtatggggtgaggctcaggaacctgcatctccaacaggtgcct--------------------------gagtgttgctggtccagagaccatgccgcgtgagccactgCTTTGGGCACAGACCTGTGACGCAGCTGTGG---TCAGCGTGGGGAG-CCCTGCCAAGGGATTTCTGCGGAAGGCTGCTTTGCTGCCAAGGAGACGCT---------AGAGGACCCTCTTCATCCTtgcgataacagagatgtccttgtatgtgctctgtccaatatagcagccacgagccacaggtggccagagagcccttgaaatgttgtgcgtgttattgttgaaactagacattttcattttagttcattttaatcaatttgaaaataaacagccacctgtggctggtggtgctcataagggacCCTGCATGCAGCCCCCGACACCGCCAGATCTTGATGTGACAGCTGGAAGTGCTGCTACAGAGGCCCTGCCAGCAGCCTGAGGGGAAGACACACGCAGACGCTCGCAGAGCCACATCCCAGTGTACTCGgcccaacctcagcagcttcttactatgtgagatcacatgtttctttcttgttgaaggcggtgtgagcaggtattcccagctgcgacagccaaaggtctcctggctggtacaGCCACAAGGACACTGAGAAGTGGGGCCGCTCACCCCCAGGACGATGACAACCACTGGCATAAGAACAAGAGAAGCAAGACTTGGGTCCTGGTGAGCTGAAGAGGGTCTGACCTGAAGGGGAGCACCCAGAC i canFam3.chr4 C 0 C 0 a score=14048.000000 s hg38.chr10_KI270825v1_alt 105649 6 + 188315 ATTTCA s panTro4.chr10 76483908 6 + 133524379 ATTTCA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76146097 6 - 133410057 ATTTCA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35087840 6 + 104879549 ATTTCA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73882118 6 - 130959383 ATTTCA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75442791 6 - 133195287 ATTTCA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73306463 6 - 125196307 atttca i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72139177 6 - 125710982 ATTTCA i chlSab2.chr9 C 0 C 0 s mm10.chr14 24200052 3 + 124902244 -CTT-- i mm10.chr14 C 0 C 0 s canFam3.chr4 27755815 5 + 88276631 -CCTCA i canFam3.chr4 C 0 C 0 e calJac3.chr12 75598620 309 - 121768101 I a score=1311662.000000 s hg38.chr10_KI270825v1_alt 105655 372 + 188315 GCATTAAATATCCAGACACAGACAGTACAGACCCATCCTGCTCCAAGAAACACATCAGAGCACTG-CACTCTGCCTGCCTGTGATGCCCAGGAAGAGCACAGAGATACTGTTGACGGCTCCATCGCAAGGACTGAGTCAGCTTCAGGT---GAGTGCAGAACCAA--CTGGTGGGTCACGGCCATGACGCTTCTT-CCAGAATATGC--------------------------TGGGGTCCAGctg-----------------cccaagaaa--------tatcttcctactcaggctgggaattccaccatcagcagtaattgc-tatgggttaggcaaatacccct--ctc-tggaatccccttttagaatgcacatgtgcctaggaaaggt----------aacgatttaacccttgaaatgccgatgggaatgagtttac s panTro4.chr10 76483914 372 + 133524379 GCATTAAATATCCAGACACAGACAGTACAGACCCATCCTGCTCCAAGAAACACATCAGAGCACTG-CACTCTGCCTGCCTGTGATGCCCAGGAAGAGCACAGAGATACTGTTGATGGCTCCATCGCAAGTACTGAGTCAGCTTCAGGT---GAGTGCAGAACCAA--CTGGTGGGTCACGGCCATGACGCTTCTT-CCAGAGTATGC--------------------------TGGGGTCCAGTtg-----------------cccaagaaa--------tatcttcctactcaggctgggaattccaccatcagcagtaattgc-tatgggttaggcaaatacccct--ctc-tggaatccccttttagaatgcacatgtgcctaggaaaggt----------aacgatttaacccttgaaatgccgatgggaatgagtttac i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76146103 372 - 133410057 GCATTAAATATCCAGACACAGACAGTACAGACCCATCCTGCTCCAAGAAACACATCAGAGCACTG-CACTCTGCCTGTCTGTGATGCCCAGGAAGAGCACAGGGATACTGTTGACGGCTCCATCGCAAGGACTGAGTCAGCTTCAAGT---GAGTGCAGAACCAA--CTGGTGGGTCACGGCCATGATGCTTCTTCCCAGAGTATGC--------------------------TGGGGTCCAGTTG-----------------CCCAAGAAA--------TATCTTCCTACTCAGGCTGGGAATTCCACCATCAGCAGTAATTGC-TATGGGTTAGGC-AATACCCCT--CTC-TGGAATCCCCTTTTAGAATGCACATGTGCCTAGGAAAGGT----------AACGATTTAACCCTTGAAATGCCGATGGGAATGAGTTTGC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35087846 371 + 104879549 GCATTAAATATCCAGACACAGACAGCACAGACCCATCCTGCTCCGAGAAACACATCAGAGCACTG-CCCTCTGCCTGCCTGTGATGCCCAGGAAGAGCACAGGGATACTGCTGACAGCTCCATCGCAAGGACTGAGTCAGCTTCAGGT---GAGTGCAGAACCAA--CTGGTGGGTCACGGCCATGAAGCTTCTT-CCAGAGTATGC--------------------------TGGGGTCCAGctg-----------------cccaagaaa--------taccttcctactcaggctgggaattccaccatcagcagtaattgc-tatgggttaggc-aatacccct--ctc-tggaatccccttttagaatgcacatgtgcctaggaaaggt----------aaccatttaacccTTGAAATGCCGATGGGAATGAGTTTGC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73882124 371 - 130959383 GCATTAAATATCCAGACACAGACAGTACAGACCCAGCCTGCTCCAAGAAACACATCAGAGCCCTG-CCCTCTGCCTGCCTGTGATGCCCAGGAAGAGCATGGGGATACTGTTGACGGCTCCATCGCAAGGACTGAGCCAGCTTCAGGT---GAGTGCAGAACCAA--CTGGTGGGTCACGGCCACGACGCTTCTT-CCAGAGTAGGC--------------------------TGGGGTCCAGctg-----------------cccaagaaa--------tatcttcctactcaggctaggaattccgccatcagcagtaattgc-tatgggttaggc-aatacccat--ctc-tagaattcccttttagaatgcacatgtgcctaggaaaggt----------aacgatttaacccTTGAAATGCCGATGGGAATGAGTTTGC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75442797 371 - 133195287 GCATTAAATATCCAGACACAGACAGTACAGACCCAGCCTGCTCCAAGAAACACATCAGAGCCCTG-CCCTCTGCCTGCCTGTGATGCCCAGGAAGAGCATGGGGATACTGTTGACGGCTCCATCGCAAGGACTGAGCCAGCTTCAGGT---GAGTGCAGAACCAA--CTGGTGGGTCACGGCCACGACGCTTCTT-CCAGAGTAGGC--------------------------TGGGGTCCAGctg-----------------cccaagaaa--------tatcttcctactcaggctaggaattccgccatcagcagtaattgc-tatgggttaggc-aatacccat--ctc-tagaattcccttttagaatgcacatgtgcctaggaaaggt----------aacgatttaacccTTGAAATGCCGATGGGAATGAGTTTGC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73306469 371 - 125196307 gcattaaataTCCAGACACAGACAGTACAGACCCAGCCTGCTCCAAGAAACACATCAGAGCCCTG-CCCTCTGCCTGCCTGTGATGCCCAGGAAGAGCATGGGGATACTGTTGATGGCTCCATCGCAAGGACTGAGCCAGCTTCAGGT---GAGTGCAGAACCAA--CTGGTGGGTCACGGCCATGACACTTCTT-CCAGAGTACGC--------------------------TGGGGTCCAGCTG-----------------CCCAAGAAA--------TATCTTCCTACTCAGGCTAGGAATTCCACCATCAGCAGTAATTGC-TATGGGTTAGGC-AATACCCAT--CTC-TAGAATTCCCTTTTAGAATGCACATGTGCCTAGGAAAGGT----------AACGATTTAACCCTTGAAATGCCGATGGGAATGAGTTTGC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72139183 371 - 125710982 GCATTAAATATCCAGACACAGACAGTACAGACCCAGCCTGCTCCAAGAAACACATCAGAGCCCTG-CCCTCTGCCTGCCTGTGTTGCCCAGGAAGAGCATGGGGATACTGTTGACGGCTCCATCGCAAGGACTGAGCCAGCTTCAGGT---GAGTGCAGAACCAA--CTGGTGGGTCACGGCCATGACGCTTCtt-tcagagtacgc--------------------------tggggtccagctg-----------------cccaagaaa--------tatcttcctactcaggctgggaattccgccatcagcagtaattgc-tatgggttaggc-aatacccct--ctc-tagaattcccttttagaatgcacatgtgcctagtaaaggt----------aacgatttaacccCTGAAATGCCGATGGGAATGAGTTTGC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75598929 373 - 121768101 gcATTTAAGATCCAGACACAGACAGTACAGACCCAGCCTGCTCCAAGAAACACATCAGAGCACTGCCCCTCTGCCTGCCTGTGACTCCCAGGAAGAATATGGGGACATTGTTGATAGCTCCATTGCAAGGACTGAACCAGCTTCAGGT---GCGTGCAGAACCAA--CTGGTGGGTCACAACCATGACTCTTCTT-CCAGAGTATGC--------------------------TGGGGTCCAGTTG-----------------CCCAAGAAA--------CATCCTCCTACTCAGGCTAGGAATTCCACCATCAGCAGTAATTGC-TGTGGGTTAGGC-AATACCCCT--CTCGGGGAATCCTCTTTCAGAATGCACATGTGTCTAGAAAAGGT----------AACCATTTAACCCCTGAAGTGCCGATGGGAATGAGTTTGC i calJac3.chr12 I 309 C 0 s mm10.chr14 24200055 418 + 124902244 GCGTGAAAGAACTGGGCACAGCCAGTGCAGGCTGAGCTCATGATAGGACAAACATCAAAGGTTTG-CTCTCAGCCTGTTCATGACTCTCAAGAAGTATCTGGGGACAATGCTGA---CCCCAGCACAAGG-CTAACTTGCCTTCAAGTTCAGCCCACTGagctaggcatggtggttcat-gcctggactccttct-actcaggaagcagtagcaggaagaccaaccaagagtttgtagtcagcctgtgctacatagagaccctcacaggaaaatagaaATTCACCTCCTGCTCATTCTCAAACTGCTGCCATGAGCAGTAAATGCATGCAGG---AGC-AGAGCCTGT--CTC-TGGAG-CCCCTGCGAGATCACACATGTTCCTTGGAAAGCT----------GTCACTGCCA-GCTCAGAACGACAATGTGAATGTGTCTAC i mm10.chr14 C 0 I 1148 s canFam3.chr4 27755820 368 + 88276631 GCATTCAACATCTGGGCACCGACACCTGAGGCCCAGCCTACTCCAGGACGTGCAGCGCTACACTG-CTGTCTGCCTGC------TGGCCGACAGGTGTGTGGGGACGCTGCTGACCACTCCACCCCAAAGACTGAGCCAGCTTCAGGT---ATGGGTTGAACGAA--ATGGTGGGTCGTTGACATGAAGCTTCTT-CCAGAAAGTGC--------------------------GGAGGTCCAGCTG-----------------CATAAAAAA--------TACCTTCCTACTCCTGCTTAAAATTCCACTGGTAACAATAGTTGC-TGTGGTTTAAGTTAATACCTCTCACTT-TGGAGAGACT------AATGCAAAGTTTCCTAAGAAAGGTTCCTCAAAGAAAGACGGTAAGCCCTGAAGTGTTGAAATGAG-GAATT--- i canFam3.chr4 C 0 C 0 a score=60014.000000 s hg38.chr10_KI270825v1_alt 106027 25 + 188315 tgattgctATCTGTTAGACAGATAT s panTro4.chr10 76484286 25 + 133524379 tgattgctATCTGTTAGACAGATAT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76146475 25 - 133410057 TGACTGCTATCTGTTAGACAGATAT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35088217 25 + 104879549 TGATTGCTATCTGTTAGACAGATAT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73882495 25 - 130959383 TGATCGCGATCTGTCAGACAGATAC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75443168 25 - 133195287 TGATCGCGATCTGTCAGACAGATAC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73306840 25 - 125196307 TGATCGCGATCTGTCAGACAGATAC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72139554 25 - 125710982 TGATTGCGATCTGTCAGACAGATAC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75599302 11 - 121768101 TGATTGCTATC-------------- i calJac3.chr12 C 0 C 0 s canFam3.chr4 27756188 25 + 88276631 TGTCAGATACCTATTAGATAATTGT i canFam3.chr4 C 0 I 320 e mm10.chr14 24200473 1148 + 124902244 I a score=305048.000000 s hg38.chr10_KI270825v1_alt 106052 96 + 188315 TGGTGAAGGGTGAAAAACTAGACAGGTCAGAGGAGTATGCTCAGGGCTTACCCAGTCC---ACCTTA-AAAAGCCTCACCTTCCCCATCTACTGATCCTG s panTro4.chr10 76484311 96 + 133524379 TGGTGAAGGGTGAAAAACTAGACAGGTCAGAGGAGTATGCTCAGGGCTTACCCAGTCC---ACCTTA-AAAAGCCTCACCTTCCCCATCTACTGATCCTG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76146500 96 - 133410057 TGGTGAAGGGTGAAAAACTAGACGGGTCAGAGGAGTATGCTCAGGGCTTACCCAGTCC---ACCTTA-AAAAGCCTCACCTTCCCCATCTACTGATCCTG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35088242 96 + 104879549 TGATGAAGAGTGAAAAACTAGACAGGTCAGAGTAGTATGCTCAGGGCTTACCCAGTCC---ACCTTA-AAAAGCCTCACCTTCCCCATCTACTGATCCTG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73882520 96 - 130959383 TGGTGAAGGGTGAAAAACCAGACAGGTCAGAGGAGTATGCTCAGGGCTTAGCCAGTCC---ACCTTA-AAAAGCCTCACCTTCCCCATCTACAGATCCTG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75443193 96 - 133195287 TGGTGAAGAGTGAAAAACCAGACAGGTCAGAGGAGTATGCTCAGGGCTTACCCAGTCC---ACCTTA-AAAAGCCTCACCTTCCCCATCTACAGATCCTG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73306865 96 - 125196307 TGGTGAAGGGTGAAAAACTAGACAGGTCAGAGGAGTATGCTCAGGGCTTACCCAGTCC---ACCTTA-AAAAGCCTCACCTTCCCCATCTACTAATCCTG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72139579 96 - 125710982 TGGCGAAGGGTGAAAAACCAGACAGGTCAGAGGAGTATGCTCAGGGCTTACCCAGTCC---ACCTTA-AAAAGTCTCGCCTTCCCCATCTACTGATCCTG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75599313 100 - 121768101 TGGTGAAGGGTGAAAAACTAGACAGGTCAGAGGAGTATGCTCAGGGCTTACCCAGTCCACAACCTTACAAAAGCCTCACCTTCCTCATCTACTGATCCTG i calJac3.chr12 C 0 C 0 e canFam3.chr4 27756213 320 + 88276631 I e mm10.chr14 24200473 1148 + 124902244 I a score=1353068.000000 s hg38.chr10_KI270825v1_alt 106148 447 + 188315 ACTGCCCCACTCCATGCACTTCCTGAAGGGTGAGTCCCACATTCCAAATTCCAACAATCCCATCATTCCATTGATATGTCTCCGGGCACCAAAAGCAGGCAGAACAAAGTAATAGGATACCGTTGGGAGCTTTGAATTGCAGTCCCAGAAGGGCCTGCCCTGAGCCCTAAACAGGATGAGGGTTATGGGAGGAACTGTGTTTttatgggtggagttgtggccccc-caaaagatgctaaagt---------------cccaatccagt-aaatgtgaatgtgaaccttatttggaaaGGtcaaagcgttatctttccgaggcgcatttgcattctaaaaggggagtcccgagagggacactgctcagcccacagcagt---tattgctgatggtgaaatagtctttacagatgatcaatttaagatgaggtcttgctgcc-gtaaggcaggctcctaggccaatctga s panTro4.chr10 76484407 447 + 133524379 ACTGCCCCACTCCATGCACTTCCTGAAGGGTGAGTCCCACATTCCAAATTCCAACAATCCCATCATTCCATTGATATGTCTCCGGGCACCAAAAGCAGGCAGAACAAAGTAATAGGATACCGTTGGGAGCTTTGAATTGCAGTCCCAGAAGGGCCTGCCCTGAGCCCTAAACAGGATGAGGGTTATGGGAGGAACTGTGTTTttatgggtggagttgtggccccc-caaaagatgctaaagt---------------cccaatccagt-aaatgtgaatgtgaaccttatttggaaaGGtcaaagcgttatcttcccgaggcgcatttgcattctaaaaggggagtcccgAGAGGGACACTGCTCAGCCCACAGCAGT---TATTGCTGATGGTgaaacagtctttacagatgatcaatttaagatgaggtcttgctgcc-gtaaggcaggctcctaggccaatctga i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76146596 447 - 133410057 ACTGCCCCACTCCATGCACTTCCTGAAGGGTGAGTCCCACATTCCAAATTCCAACAATCCCATCATTCCATTGATATGTCTCCAGTCACCAAAAGCAGGCAGAACAAAGTAATAGGATACCGTTGGGAGCTTTGAATTGCAGTCCCAGAAGGGCCTGCCCTGAGCCCTAAACAGGATGAGGGTTATGGAAGGAACTGTGTTTttatgggtggaattgtggccccc-caaaatatgctaaaat---------------cccaatccagt-aaatgtgaatgtgaaccttatttggaaaGGTCAAAGCGTTATCTTTCCCAGGCGCATTTGCACTCTAAAAGGGGAGCCCCGAGAGGGACGCTGCTCAGCCCACGGCAGT---TATTGCTGATGGTgaaacagtctttacagatgatcaatttaagatgaggtcttgctgcc-ataaggcaggctcctaggccaatctga i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35088338 448 + 104879549 ACTGCCCCACTCCATGCACTTCCTGAAGGGTGAGTCCCACATTCCAAATTCCAACAATCCCATCATTCCATTGATATGTCTCCGGACACCAAAAGCAGGCAGAACAAAGTAATAGGATACCGTTGGGAGCTTTGAATTGCAGTCCCAGAAGGGCCCGCCCTGAGCCCTAAACAGGATGAGGGTTATGGGAGGAACTGTGTTTttatgggtggaattgtggccccctcaaaagatgctaaagt---------------cccaatccagt-aaatgtgaatgtgaaccttatttggaaaGGTGaaagcattatctttccgaggcgcatttgcattctaaaaggggagtcccgAGAGGGACGCTGCTCAGCCCACGGCAGT---TATTGCTGATGGTgaaatagtctttacagatgatcaatttaagatgaggtcttgctgcc-gtaaggcaggctcctaggccaatctga i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73882616 436 - 130959383 ACTGTCCCACTCCATGCACTTCCTGAAGGGTGAGTCCTATCTTCCAAATTCCAACAATCCCATCATTCCATTGATGTGTCTCCGGGCACCAAAAGCAGGCAGAACAAAGTAATAGGATACCGTTAGGAGCTTTGAATTGCGGTCCCAGAAGGGCCCGCCCTGAGTCCTAAACAGGATGAGGGTTATAGGGGGAACTGTGTTTttatgggtggaattgtggccccc-caaaagatgctaaagt---------------cccaatccagt-aaatgtgaacgtgaaccttatttggaaaGGtcaaagcattacctttccgaggcacatctgcattctaaaaggggagtcctgagaggcG------------CACAGCAGT---TATTGCTGATGGTgaaacagtctttacagattatcaatttaagatgaggtcttgctacctgtaaggcaggctcctaggccaatctga i rheMac3.chr9 C 0 I 322 s macFas5.chr9 75443289 436 - 133195287 ACTGTCCCACTCCATGCACTTCCTGAAGGGTGAGTCCTATCTTCCAAATTCCAACAATCCCATCATTCCATTGATGTGTCTCCGGGCACCAAAAGCAGGCAGAACAAAGTAATAGGATACCGTTAGGAGCTTTGAATTGCGGTCCCAGAAGGGCCCGCCCTGAGTCCTAAACAGGATGAGGGTTATAGGGGGAACTGTGTTTttatgggtggaattgtggccccc-caaaagatgctaaagt---------------cccaatccagt-aaatgtgaacgtgaaccttatttggaaaGGtcaaagcattacctttccgaggcacatctgcattctaaaaggggagtcctgagaggcG------------CACAGCAGT---TATTGCTGATGGTgaaacagtctttacagattatcaatttaagatgaggtcttgctacctgtaaggcaggctcctaggccaatctga i macFas5.chr9 C 0 I 322 s papAnu2.chr9 73306961 448 - 125196307 ACTGTCCCACTCCATGCACttcctgaagggtgagtcctaCCTTCCAAATTCCAACAATCCCATCATTCCATTGATGTGTCTCCAGGCACCAAAAGCAGGCAGAACAAAGTAATAGGATACCGTTAGGAGCTTTGAATTGCAGTCCCAGAAGGGCCCGCCCTGAGTCCTAAACAGGATGAGGGTTATAGGGGGAACTGTGTTTTTATGGGTGGAATTGTGGCCCCC-TAAAAGATGCTAAAGT---------------CCCAATCCAGT-AAATGTGAATGTGAACCTTATTTGGAAAGGTCAAAGCATTACCGTTCCGAGGTACATCTGCATTCTAAAAGGGGAGTCCCGAGAGGCGCGCTGCTCAGCCCACGGCAGT---TATTGCTGATGGTGAAACAATCTTTACAGATTATCAAtttaagatgaggtcttgctgctGGTAAGGCAGGCTCCTAGGCCAATGTGA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72139675 436 - 125710982 ACTGTCCCACTCCATGCACTTCCTGAAGGGTGAGTCCTATCTTCCAAATTCCAACAATCCCATCATTCCATTGATGTGTCTCCGGGCACCAAAAGCAGGCAGAACAAAGTAACAGGATACCGTTAGGAGCTTTGAACTGCAGTCCCAGAAGGGCCCGCCCTGAGTCCTAAACAGGATGAGGGTTATGGGGGGAACTGTGTTTttatgggtggaattgtggccccc-caaaagatgctaaagt---------------cccaatccagt-aaatgtgaacgtgaaccttatttggaaaGGtcaaagcattacgtttccgaggcgcatctgcattctaaaaggggagtcctgagaggcGCGCTGCTCAGCCCACGGCAGT---TATTGCTGATGGTgaaacagtctttacagattatcaatttaagatgag------------gtaaggcaggctcctaggccaatctga i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75599413 435 - 121768101 ACTGCCCCACTCCATGCACTTCCTGAAGAGTAAGTCCCACATTCCAAATTCCAACAATCCCATCATTCCATTGATGTGTCTCAGGGCACCAAAAGCAGACAGAACAAAGTGACAGGACACCGTTAGGAGCTTTGAATTGCAGTCCCAGAAGAGCCCACCCTGAGCCCTAAACAGGATGAGGATTCTGGGAGGAACTGTGTTTttatgggtggaattgtgggcccc-caacagatgctgaagt---------------cccaatccagtaaaatgtgaatatgaaccttatctggaaaGGT--AAGTGTTACCTTTCCTAGGCGCATCTTCATTCTAAAAGGGGATTCCCAAGAGGGGCGCTGCTCAGCCCACAGCAGTTACTATTGCTGATGGTGGAACAGTCTTTAC--------------agatgaggttgcggtagc-gtaaggcaggctcctaggccaatctga i calJac3.chr12 C 0 C 0 s canFam3.chr4 27756533 290 + 88276631 ACTGCTCCACTCCCAAGGGTTTCCCGGGAGCCAGTCTCATGTTTGAAATTCCAACAACCCCACCATT--------------------------------------GGGGTGATGGACTCACAACTGAAGCTCTGAGCTGTGGTCCCAGAAGAGTCCTCCCTGAACCCTGGACAGGG--------ATGACGGAACCtgtgat------ggctgcaccatgtcctcc-caaaag-tcctgaaatcctcacaccgcacacccccaccctat-aaatgtgaatgtga--------------------------------------------------------------------------------------------------cctcgc---tggagatacagtctttgccggtgatcaggtgaagacgaggtcatcctgga-gtagga--------------------- i canFam3.chr4 I 320 C 0 e mm10.chr14 24200473 1148 + 124902244 I a score=1565170.000000 s hg38.chr10_KI270825v1_alt 106595 477 + 188315 ccagtgtccttattaa--aaggggaaatttggagacagacacacatggacggagaacatcatgtgaacacaaaggcagagatcagtgtgatgtcggcaaaccaaggagcaccaaggattaccagcaagccaccagaagcgaggagagaggcccgggacagatctctccctagcgccttcagcctgcg-tggcctcactgacactttgatcttgggcttctgtcctccagaactgtgagacaatcaatttctgctgtgtaagccacctggtctgcggcactttgttatagcagccctagaaaact-aaGATGGAACTCGCCGGCTGGTCActgtcttccctcttatcacactaccttcc-cttactgcagctacttatttaactgtttcccaccaaaag-----------------------------------accctaacatccaggagtgtggggcccacatctgcctaattcgccactacggcccaagcccacctctggcacactggaggtgtt s panTro4.chr10 76484854 477 + 133524379 ccagtgtccttattaa--aaggggaaatttggagacagacacacacggagggagaacatcatgtgaacacaaaggcagagatcagtgtgatgtcggcaaaccaaggagcaccaaggattaccagcaagccaccagaagcgaggagagaggcccgggacagatctctccctagcgccttcagcctgcg-tggcctcactgacactttggtcttgggcttctgtcctccagaactgtgagacaatcaatttctgctgtgtaagccacctggtctgcggcactttgttatagcagccctagaaaact-aaGAGGGAACTCCCTGGCTGGTCACTGTCTTCCCTCTTATCACACTGCCTTCC-CTTACTGCAGctacttatttaactgtttcccaccaaaag-----------------------------------accctaacatccagaagtgcggggcccacatctgcctaattcgccactacggcccaagccgacctctggcacactggaggtgtt i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76147043 477 - 133410057 ccagtgtccttattaa--aaggggaaatttggagacagacacacagggagggagaacatcatgtgaacacaaaggcagagatcagtgtgatgtcagcaaaccaaggagcaccaaggattaccagcaagccaccagaagcgaggagagaggcccgggacagatctctccctagcgccttcagcctgcg-tagcctcgctgacactttgatcttgggcttctgtcctccagaactgtgagacaatcaatttctgctgtgtaagccacctggtctgtggcactttgttacagcagccctagaaaact-aaGATGGAACTCCCCCGCTGGTCActgtcttccctctcatcacaccgccttcc-cttactgtagctacttatttaactgtttcccaccaaaag-----------------------------------accctaacatccaggagtgcggggcccacatctgcctaattcgctactatggcccaagcccacctctggcacactggaggtgtt i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35088786 478 + 104879549 ccagtgtccttattaa--aaggggaaatttggagacagacacacagggagggagaacatcatgtgaacacaaaggcagagatcagtgtgatgtcggcaaaccaaggagcaccaaggattaccagcaagccaccagaagcgaggagagaggcccgggacagatctctccctagcgccttcaacctgcgttggcctcgctgacactttgatcttgggcttctgtcctccagaactgtgagacaatcaatttctgctgtgtaagccacctggtctgcagcactttgttatagcagccctagaaaact-aaGATGGAACTCCCCCGCTGGTccctgtcttccctctcatcgcactgccttcc-catactgtaactacttatttaactgtttcccaccaaaag-----------------------------------accctaacatccaggagtgcggggcccacatctgcctaattcgccactacggcccaagcccacctctggcacactggaggtgtt i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73883374 477 - 130959383 ccagtatccttattaa--aaggggaaatttggagacagacacacacggagggagagtatcatgtgaacacaaaggcagagatcagtgtgatgttggcaaaccaaggagcaccaaggattaccagcaagccaccagaagcgaggagagaggcccaggacagatccctccctagcaccttcagcccgcg-tggcctcactaacactttgatcttgggcttctgtcctccaaaactgtgagacaatcaatttctgctgtgtaagccacctggtctgtggcacttcattatagcagtcccagaaaact-aaGATGGAACTCCCCCGCTGGTCACTGTCTTCCCTCCCTTCACACTGCCTTCC-CTTACTGCGGctacttatttaactgtttcccaccaaaag-----------------------------------accctaacatccaggagtgtggggcccacatctgcctaattcgccactacagcccaagcccacctctggcacactggaggtgtt i rheMac3.chr9 I 322 C 0 s macFas5.chr9 75444047 477 - 133195287 ccagtatccttattaa--aaggggaaatttggagacagacacacacggagggagagtatcatgtgaacacaaaggcagagatcagtgtgatgttggcaaaccaaggagcaccaaggattaccagcaagccaccagaagcgaggagagaggcccaggacagatccctccctagcaccttcagcccgcg-tggcctcactaacactttgatcttgggcttctgtcctccaaaactgtgagacaatcaatttctgctgtgtaagccacctggtctgtggcacttcattatagcagtcccagaaaact-aaGATGGAACTCCCCCGCTGGTCACTGTCTTCCCTCCCTTCACACTGCCTTCC-CTTACTGCGGctacttatttaactgtttcccaccaaaag-----------------------------------accctaacatccaggagtgtggggcccacatctgcctaattcgccactacagcccaagcccacctctggcacactggaggtgtt i macFas5.chr9 I 322 C 0 s papAnu2.chr9 73307409 464 - 125196307 CCAGTATCCTTattaa--aaggggaaatttggagacagacacacacgGAGGGAGAGTATCATGTGAACACAAAGGCAGAGATCAGTGTAATGTTGGCAAACCAAGGAGCACCAAGGATTACCAGCAAGCCACCAGAAGCGAGGAGAGAGGCCCAGGACAGATCCCTCCCTAGCACCTTCAGCCCCCG-TGGCCTCACTAACACTTTGATCTTGGGCTTCTGaactccaaaactgtgagacaatcAATTTCTGCTGTGTAAGCCACCTGGTCTGTGGCACTTTATTATAGCAGTCCTAGAAAACT-AAGATGGAACTCCCCCGCTGGTCACTGTCTTCCCTCTCTTCACACTGCCTGCC--------------CTTATTTAACTGTTTCCCACCAAAAG-----------------------------------ACCCCAACATCCAGGAGTGTGGGGCCCACATCTGCCTAATTCGCCACTACAGCCCAAGCCCACCTCTGGCACACTGGAGGTGTT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72140111 477 - 125710982 ccagtatccttattaa--aaggggaaatttggagacagacacacacggagggagagtatcatgtgaacacaaaggcagagatcagtgtgatactggcaaaccaaggagcaccaaggattaccagcaggccaccagaagtgaggagagaggcccaggacagatccctccctagcaccttcagcccgcg-tggcctcactaacactttgatcttgggcttctgtcctccaaaactgtgagacaatcaatttctgctgtgtaagccacctggtctatggcactttattatagcagtcccagaaaact-aaGATGGAACTCCCCCGCTGGTCACTGTCTTCCCTCTCTTCACACTGCCTTCC-CTTACTGtggctacttatttaactgtttcccaccaaaag-----------------------------------accctaacatccaggagtgtggggcccacatctgcctaattcgccactacagcccaagcccacctctggcatactggaggtgtt i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75599848 481 - 121768101 ccagtgtccttccttattaaagtgaaatctggagacagacacacgcagagggagaacatcatgtgaacacaaaggcggagatcaatgtgatgtctgcagaccacgacgtgccaaggattgccagcaagccaccagaagcgaggagagaggcctaggacagatccctccctagcgccttcagtgcgca-tggcctcattgacactttcatcttgggcttctgtcctccagaactgtgagacaataaatttctgttgtgtaagccacctggtctgcggcactctgctatagcagtcctagaaaactCAAGACGGAACTCCCCCGCTGGCCACTGTCTTCCTTCTCATCACACTGCCCTCCCCTTACTACAGctgcttattcaactgttccccaccaaaag-----------------------------------accctaacatccagaagtgtggggcccacatccgcctgatttgtcactatggcactagcccacctctggcatactgaaggtgtt i calJac3.chr12 C 0 C 0 s canFam3.chr4 27756823 456 + 88276631 ctggtgtcccttttta--aagaggagacgtgcagacagacacgcacacagggacaccacaacgtgaagacaaaggcagagactggggtgatacacaaaagccgaggaccacccaggattgccaacaccccaccggaggag-ggagaggaacctgggacagaccctgccctgaggccatcag-atgtg-tggc-------------------------------ctccagaactgtgtgcgaatgcagttgtgttgtgtaag--------------gcgcttcgtaacggcagccctgggaaac--AGCACGGCACCCCCT--------ACCGGTACCTCCCTGACTGCACTGACCTCA-CGCACCGTGTTTGCTTAGAAAACCATCTCCCaaaaaaagaaaaaagaaaaaaaagaaaaCCATCTCCCCCGTGTACCCCAAGGCCCACAAGCCCTGACACCACATCTGCCCTACTCCCCACTGCGTTCCAAACCCACTTCCAGCGCAGCAGAGGTGCT i canFam3.chr4 C 0 C 0 e mm10.chr14 24200473 1148 + 124902244 I a score=602224.000000 s hg38.chr10_KI270825v1_alt 107072 184 + 188315 --caagatgt-----gagctgacatatgaaagaGctgtcct-gactagttctagaatctcaggcatgtgactccccctcccagaatgtcaatttccccatctctctgcagagggaaaagaaaataattgga-gtagatgacctctgtgagtccttcgggctcAAAAGATGGCCGGGACTC-ACCACTGAAGGTG s panTro4.chr10 76485331 184 + 133524379 --caagatgt-----gagctgacatatgaaagaGctgtcct-gactagttctagaatctcaggcatgtgacttcccctcccagaatgtcaatttccccatctctctgcagagggaaaagaaaataatcgga-gtagatgacctctgtgagtccttcgggctcAAAAGATGGCCGGGACTC-ACCACTGAAGGTG i panTro4.chr10 C 0 M 96 s ponAbe2.chr10 76147520 183 - 133410057 --caagatgt-----gagctgatatatgaaAGAGctgtcct-gactagttctagaatctcaggcatgtgacttcccctcccagaatgtcaatttccccatctctctgcagggggaaaagaaaataattgga-gtagatgacctctgtgagtccttcgggctcAAAAGAT-GCCGGGACTC-ACCACTGAAGGTG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35089264 183 + 104879549 --caagatgt-----gagctgaCATACGGAAGAGctgtcct-gactagttctagaatctcaggcatgtgacttcccctcccagaatgtcaatttccccatctctctgcagggagaaaagaaaataattgga-gtagatgacctctgtgagtccttcgggctcAAAAGAT-GCCAGGACTC-ACCACTGAAGGTG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73883851 182 - 130959383 --cagGATTT-----GAACTGACATACTAAAGAGCCGTCct-gactagtcctagaatctcaggcatgtgacttcccctcccagaatgtcagtttccccatctctctgcagggtgaaaagaaaatagtcgga-gtagatgacttctgtgagtccttcaggct-caaatac-gctggaactc-ACCACTGAAGGTG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75444524 182 - 133195287 --cagGATTT-----GAACTGACATACGAAAGAGCCGTCct-gactagtcctagaatctcaggcatgtgacttcccctcccagaatgtcagtttccccatctctctgcagggtgaaaagaaaatagtcgga-gtagatgacttctgtgagtccttcaggct-caaatac-gctggaactc-ACCACTGAAGGTG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73307873 182 - 125196307 --CAGGATGT-----GAACTGACATATGAAAGAGCCGTCCT-GACTAGTCCTAGAATCTCAGGCATGTGACTTCCCCTCCCAGAAtatcagtttccccatctctctgcagagggaaaagaaaatagtCGGA-GTAGATGACTTCTGTGAGTCCTTCAGGCT-CAAATAC-GCTGGAACTC-ACCACTGAAGGTG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72140588 183 - 125710982 --cagGATTT-----GAACTGACATACGGAAGAGCCGTCct-gactagtcctagaatctcaggcatgtgacttcctctcccagaatgtcagtttccccatctctctgcagggggaaaagaaaatagtcgga-gtagatgacttctgtgagtccttcaggctccaaAGAT-GCTGGAACTT-CCCACTGAAGGTC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75600329 184 - 121768101 --caggatgt-----gaactgacatatgaaagaGctgtcct-gactagttcgagaatctcaggcatgtgacttcccctcccagaatgtcaatttccccatctctctacaggaggaaaagaaaataattgga-gtagatggcctcggtgagtccttcgggctcAAAAGAT-GCCGGGACTCAACCACTGAAGGTg i calJac3.chr12 C 0 C 0 s mm10.chr14 24201621 175 + 124902244 --caGAACGT-----GAACTGACAGAGGGA--TGTCAGCTC-AACTGGTTCAGGAAACTACGTCATGGTACTTCC-CTCTGTGGATGTCACCTTTCCCATCTCTCTGTAGCAGGGAAGCGCAGTGACTAGACCTAGAT--CTCCTGTGC-TCCTTCAAGTT-CATAAAC-TCCATGGCCA---CACTAAAGGAG i mm10.chr14 I 1148 C 0 s canFam3.chr4 27757279 162 + 88276631 CCCTAAGTGTTCCTCGAGTTAACACATGAAAGGTCAGCCCCGGACTGGGCCTGGAGTCCCCGGCAt----------------gagtgtcagtctccccctctgtctatacagaggagataaaataactgga-ccggatggcctctgggggcccttccgactacagaaac-tccacgaccc-------------- i canFam3.chr4 C 0 C 0 a score=729979.000000 s hg38.chr10_KI270825v1_alt 107256 304 + 188315 TCTGCATCCATCATGGTCAGATCAGGCCATGAGAAACCCCACTAGAGGTGCT-AAACAG--------------AGG------------GAATGGGTCACAGAGGTGTGGGAAGCCTGAGAAACCACTGCGGCCTTCCTGCTGGA----CT---------TCAGAGAAGGGCTGGCCTCATTTTATGGGCTTTCTGAAACCCATATTCAGAGAAACACACCCAATTCAGCATGGACTGGCAATGCCTATCCCCAAGGA--------AAC---------------------------------------TCCAAAAGGGGTG-AGTCT-CCTGGGCAGTGGTCACTGAGTTACTACAAGGCCTTTGGGGTTGGGGTGGGGATGGTGGGTCAACAG s ponAbe2.chr10 76147703 304 - 133410057 TCTGCATCCATCATGGTCATATCAAGCCATGAGAAACCCCACTAGAGGTGCT-AAACAG--------------AGG------------GAATGGGTCACAGAGGTGTGGGAAGGCTGAGAGACCACTGCGGCCTTCCTGCTGGA----CT---------TCAGGGAAGGGCTGGCCTCATTTTATGGGCTTTCTGAAACCCATGTTCAGAGAAACGTACCCAATTCAGCATGGACTGGCAATGCCTATCTCCAAGGA--------AAC---------------------------------------TCCAAAAGGGGTG-AGTCT-CCTGGGCAGTGGTCACTGAGTTACTACAAGGCCTTTGGGGTTGGGGTGGGGATGGTGGGACAACAG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35089447 303 + 104879549 TCtgcatccatcatggtcagatcaggccatgagaaaccccactagaggtgct-aaacag--------------agg------------gaatgggtcacagaggtgtgggaaggctgagagaccaCTGTGGTCTTCCTGCTGGA----CT---------TCAGAGAAGGGCTGGCCTCATTTTATGGGCTTTCTGAAACCCATGTTCAGAGAAACACACCCAATTCAGCATGGACTAGCCATGCCTATCCCCACGGA--------AAC---------------------------------------TCCAAA--GGGTG-AGTCTCCCTGGGCAGTGGTCACTGAGTTACTACAAGGCCTTTGGGGTTGGGGTGGGGATGGTGGGACAACAG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73884033 312 - 130959383 TCTGCATCCATCACAGTCAGATCAGGCAATGAGAAACCCCACTAGAGGTGCTAAAACAG--------------AGG------------GAATGGGTCACAGAGGTGTGGGAAGGCTGAG--ACTACTGCGGCCTTCCTGCTGGA----CTTCAGTGAACTCAGAGAAGGGCTGGCCTCATTTTATGGGCTTTCTGAAACCCATGTTCAGAGAAACATATCCAATTCAGCGTGGACTGGCAATGCCTATCCCCAAGGA--------AAC---------------------------------------TCCAAAAGGGGTG-AGTCT-CCTGGGCAGTGGCCACTGAGTTACTACGAGGCCTGTAGAGTGGAGGTGGGGATAGTGGGACAACAG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75444706 312 - 133195287 TCTGGATCCATCACGGTCAGATCAGGCAATGAGAAACCCCACTAGAGGTGCTAAAACAG--------------AGG------------GAATGGGTCACAGAGGTGTGGGAAGGCTGAG--ACTACTGCGGCCTTCCTGCTGGA----CTTCAGTGAACTCAGAGAAGGGCTGGCCTCATTTTATGGGCTTTCTGAAACCCATGTTCAGAGAAACATATCCAATTCAGCGTGGACTGGCAATGCCTATCCCCAAGGA--------AAC---------------------------------------TCCAAAAGGGGTG-AGTCT-CCTGGGCAGTGGCCACTGAGTTACTACGAGGCCTGTAGAGTGGAGGTGGGGATAGTGGGACAACAG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73308055 312 - 125196307 TCTGCATCCATCACGGTCAGATCAGGCAATGAGAAACCCCACTAGAGGTGCTAAAACAG--------------AGG------------GAATGGGTCACAGAGGTGTGGGAAGGCTGAG--ACTACTGCGGCCTTCCTGCTGGA----CTTCAGTGAACTCAGAGAAGGGCTGGCCTCATTTTATGGGTTTTCTGAAACCCATGTTCAGAGAAACATATCCAATTCAGCATGGACTGGCAATGCCTATCCCCAAGGA--------AAC---------------------------------------TCCAAAAGGGGTG-AGTCT-CCTGGGCAGTGGCCACTGAGTTACTACGAGGCCTGTAGAGTGGAGGTGGGGATAGTGGGACAACAG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72140771 312 - 125710982 TCTGCATCCATCATGGTCAGATCAGGCAATGAGAAACCCCACCAGAGGTGCTAAAACAG--------------AGG------------GAATGGGTCACAGAGGTGTGGGAAGGCTGAG--ACTACTGTGGCCTTCCTGCTGGA----CTTCAGTGAACTCAGAAAAGGGCTGGCCTCATTTTATGGCCTTTCTGAAACCCATGTTCAGAGAAACATATCCAATTCAGCGTGGACTGGCAATGCCTATCCCCAAGGA--------AAC---------------------------------------TCCAAAAGGGGTG-AGTCT-CCTGGGCAGTGGCCACTGAGTTACTACGAGGCCTGTAGAGTGGAGGTGGGGATAGTGGGACAACAG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75600513 317 - 121768101 tctgcatcc-----------atcaggctatgaaaaaccccactagaggtgtt-aaacagagggcacatcatgcagg------------gaatgggtcacggaggtgggggaaggctgagagactaCTGCGGCCTTCCTGCTGGA----TTTCAGGGAACTCGGAGAAGGGCTGGCCTCATTGTGTGGGCTTTCTGGAACCCATGTTCAGAGAAACATATCCAATTCAGCATAGACTGGCAATGCCTGTTCCCAAGGC--------AAC---------------------------------------TCCAAAAGGGGTGAAGTCT-CCTGGGTAGTGGTCACTGAGCTACTATGAGGCCTTTGGGGTGGGGGTGGGGGTGATGGGACAGCAG i calJac3.chr12 C 0 C 0 s mm10.chr14 24201796 265 + 124902244 --TCCATACATCACAATTATATAAAAC-ATCGGGGCTTCCAATAGAGGGGTG-CAACTC--------------AGG------------GCAAAGGTCACA------TGAGAAGCTCAGGAAGAGCATATGGCC-TCTTGCCAGC----ACACAG---ACCTGAGTCAGGCCTGGTCTCACTCT---------------CCAAGGCTCAGGAAA---CATCCATTTCAGCATGGACTA-----GCCTCTTTCCTAGGACAGCACATGAC---------------------------------------TCCTACTGCAGAG-GACAA-GCAGG--AGGGGTCA--AGCTTAACAAGCAGCTTTTGGGG-------------GGCTGGACAG--- i mm10.chr14 C 0 C 0 s canFam3.chr4 27757441 311 + 88276631 tCtg--tccatcagggtcagatctggatgtgagaaaccacgcaag-ggtgtt-aaacag--------------aaggcacctgacgcaggatgggtgacagaggtgtgggagggctgggagaccGGGATAACCTTCCTGTCGGGACGTCTCCAGTGAAGGGAGGGCAGGACCG-------TTGATGGGCTTCTGGAAAC----------------------------ACATGGACAGGCAACTCCTGTCCCCAAGGC--------AACACGCGGCCCAGGGGGCTGTTCCCACTTACAACAGACAGTCCCAAGAGGGGCC-ATTCT-CATGGACAGTGGTCACGGAGGCAC------------AAGGTTGGGGTTGGGG----GGGACAA--- i canFam3.chr4 C 0 C 0 e panTro4.chr10 76485515 96 + 133524379 M a score=2088334.000000 s hg38.chr10_KI270825v1_alt 107560 592 + 188315 GCTCCCCTAGAAGCCCTGTGCCCTGACAAAGTAA-ACAATGGCAAAACAT-GTGCTTCCCAGCACTCACCTCCCCACCT-CCTTCTAACATCAGAACTGGGT--------------------------TTCTGATGATGGGAGAAAATGTAAATGAAATCAACGGAAGGATGATCCTGTGA-GTAATCTGACAAGGGAGAACCAGCTTCCTCTCCCATGAACCCC------AGCTGCCTTGGCTTTCACCCAGACCCCTGGCCCACCCGGTGTCCTCCCCAGA------------CAGTGGTACTCACCCACACTG-CTGAGGGAGCTGCTGCTTTCTGAGTCTGAGGGCATGGTGGACAGGACGCTGTAGGTAGAACCTGGGGAAAGAGGGG-AGACC-A--TGTTACTAACCCCAAGGGGTCACTCGTCTTCACCCCAAG-----------CCAGCTGATCATCAGTCAATGCCAGGCCATGAGAGCT-ACATG-CACCAGGCACTAGAAATCCACATCCACGGGCCAAGCAGAGGAGGCGCGCTCAGCA-GATCTGG-ACTTCGGTGTTTCTGCCAGGCCTCCCACCTCACTTTATCGGCCCCTCCTGCTCTGGG-------CAGGCGGGCAGAGGGGAACTTGGAGTCAGTCAGCTGGCTTCT s panTro4.chr10 76485615 592 + 133524379 GCTCCCCTAGAAGCCCTGTGCCCTGACAAAGTAA-ACAATGGCAAAACAT-GTGCTTCCCAGCACTCACCTCCCCACCT-CCTTCTAACATCAGAACTGGGT--------------------------TTCTGATGATGGGAGAACATGTAAATGAAATCAACAGAAGGATGATCCTGTGA-GTAATCTGACAAGGGAGAACCAGCTTCCTCTCCCATGAACCCC------AGCTGCCTTGGCTTCCACCCAGACCCCTGGCCCACCCGGTGTCCTCCCCAGA------------CGGTGGTACTCACCCACACTG-CTGAGGGAGCTGCTGCTTTCTGAGTCTGAGGGCATGGTGGACAGGACGCTGTAGGTAGAACCTGGGGAAAGAGGGG-AGACC-A--TGTTACTAACCCCAAGGGGTCACTCGTCTTCACCCCAAG-----------CCAGCTGATCATCAGTCAATGCCAGGCCATGAGAGCT-ACATG-CACCAGGCACTAGAAATCCACATCCAGGGGCCAAGCAGAGGAGGCGCGCTCAGCA-GATCTGG-ACTTTGGTGTTTCTGCCAGGCCTCCCACCTCACTTTATCGGCCCCTCCTGCTCTGGG-------CAGGCGGGCAGAGGGAAACTTGGAGTCAGTCAGCTGGCTTCT i panTro4.chr10 M 96 C 0 s ponAbe2.chr10 76148007 604 - 133410057 GCTCCCCTAGAAGCCCTGTGTCCTGACAAAGTAA-ACAATGGCAAAACAT-GTGCTTCCCAGCACTCACCTCCCCACCT-CCTTCTAACATCAGAACTGGGT--------------------------TTTTGATGATGGGAGAAAATGTAAATGAAATCAACAGAAGGATGATCCTGTGA-GTAATCTGACAAGGGAGAACCAGTTTCCTCTCCCATGAACCCC------AGCTGCCTTGGCTTTCACCCAGACCCCTGGCCCACCTGGTGTCCTCCCCAGA------------CGGCGGTACTCACCCACACTGCCTGAGGGAGCTGCTGCTTTCTGAGTCTGAGGGCATGGTGGACAGGACGCTGTAGGTAGAACCTGGGGAAAGAGGGG-AGACC-G--TGTTACTAACCCCAAGGGGTCACTCATCTTCACCCCAAGCCACTGTCAGACCAGCTGATCATCAGTCAATGCCAGGCCATGAGAGCT-ACATG-CACCAGGCACTAGAAATGCACATCCAGGGGCCAAGCAGAGGAGGCGCGCTCAGCA-GATCTGG-ACTTCGGTGTTTCTGCCAGGCCTCCCACCTCACTTTATCGGCCCCTCCTGCTCTGGG-------CAGGCAGGCAGAGGGGAACTTGGAGTCAGTCAGCTGGCTTTT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35089750 603 + 104879549 GCTCCCCTAGAAGTCCTGTGCCCTGACAAAGTAA-ACAATGGCAAAACAT-GTGCTTCTCAGCACTCACCTCCCCACCT-CCTTCTAACATCAGAACTGGGT--------------------------TTTTGCTGATGGGAGAAAATGTAAATGAAATCAACAGAAGGATGATCCTGTGA-GTAATCTGACAAGGGAGAACCAGCTTCCTCTCCCATGAACCCC------AGCTGCCCTGGCTTCCACCCAGACCCCTGGCCCACCCAGTGTCCTCCCCAGA------------AGGTGGTACTCACCCACACTG-CTGAGGGAGCTGCTGCTTTCTGAGTCTGAGGGCATGGTGGACAGGACGCTGTAGGTAGAACCTGGGGAAAGAGGGG-AGACA-G--TGTTACTAACTCCAAGGGGTCACTTGTGTTCACCCCAAGCCACTGTCAGACCAGCTGATCATCAGTCAATGCCAGGCCATGAAAGCC-ACATG-CACCAGGCACTAGAAATCCACATCCAGGGGCCAAGCAGAGGAGGCGTGCTCAACA-GATCTGG-ACTTCGGTGTTTCTGCCAGGCCTCCCACCTCACTTTATCGGCCCCTCCTGCTCTGGG-------CAGGCGGACAGAGAGGAACTTGGAGTCAGTCAGCTGGCTTCT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73884345 602 - 130959383 GCTCCCCTAGAAGCCCTGTGCCTGGACAAAGTGA-ACAATGGCAAAACAT-GTGCCTCCCAGCACTCACCTCCCCACCTCCCTTCTAACATCAGAAATGGGT--------------------------TTTTGCTGAT-GGAGACAATGTAAATGAAATCAACAGAA-GATGATCCTGTGA-GTAATCTGACAAGGGAGAACCAGCTTCCTCTCCCATGAACCCC------GGCTGTCTCGGCTTCCACCCAGACCCCTGGCCTACCAGGTGTCCTCCCTAGA------------AGGCAGTACTCACCCACACTG-CTGAGGGAGCTGCTGCTTTCTGAGTCTGAAGGCATGGTGGACAGGACGCTGTAGGTAGAACCTGGGGAAAGAGGGG-AGACC-G--TGTTACTAATCCCAAGGGGTCACTCGTCTTCACCCCAAGCCACTGTCAGACCAGTTGATCATCAGTCAATGCCAGGCCATGAGAGCC-ACATG-CACCAGGCACTAGAAATACACATCCAGGGGCCAAGCAGAGGAGGCACGCTCAGCA-GATCTGG-ACTTCGGTGTTTCTGCCAGGCCTCCCACCTCACTTTATACACCCCTCCTGCTCTGGG-------CAGGCGCGCAGAGGGGAACTTGGAGTCAGTCAGCTGGCTTCT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75445018 602 - 133195287 GCTCCCCTAGAAGCCCTGTGCCTGGACAAAGTGA-ACAATGGCAAAACAT-GTGCCTCCCAGCACTCACCTCCCCACCTCCCTTCTAACATCAGAAATGGGT--------------------------TTTTGCTGAT-GGAGACAATGTAAATGAAATCAACAGAA-GATGATCCTGTGA-GTAATCTGACAAGGGAGAACCAGCTTCCTCTCCCATGAACCCC------GGCTGTCTCGGCTTCCACCCAGACCCCTGGCCTACCGGGTGTCCTCCCTAGA------------AGGCAGTACTCACCCACACTG-CTGAGGGAGCTGCTGCTTTCTGAGTCTGAAGGCATGGTGGACAGGACGCTGTAGGTAGAACCTGGGGAAAGAGGGG-AGACC-G--TGTTACTAATCCCAAGGGGTCACTCGTCTTCACCCCAAGCCACTGTCAGACCAGTTGATCATCAGTCAATGCCAGGCCATGAGAGCC-ACATG-CACCAGGCACTAGAAATACACATCCAGGGGCCAAGCAGAGGAGGCACGCTCAGCA-GATCTGG-ACTTCGGTGTTTCTGCCAGGCCTCCCACCTCACTTTATACACCCCTCCTGCTCTGGG-------CAGGCGCGCAGAGGGGAACTTGGAGTCAGTCAGCTGGCTTCT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73308367 596 - 125196307 GCTCCCCTAGAAGCTCTGTGCCCGGACAAAGTGA-ACAATGGCAAAACAT-GTGCCTCCCAGCActcacctccccacctcccttctAACATCAGAAATGGGT--------------------------TTTTGCTGAt-ggagaaaatgtaaatgaaatcaaCAGAA-GATGATCCTGTGA-GTAATCTGACAAGGGAGAACCAGCTTCCTCTCCCATGAACCCC------AGCTGTCTCAGCTTCCACCCAGACCCCTGGCCTACCCAGTGTCCTCCCTAGA------------AGGCAGTACTCACCCACACTG-CTGAGGGAGCTGCTGCTTTCTGAGTCTGAAGGCATGGTGGACAGGACGCTGTAGGTAGAACCTGGGGAAAGAGAGG-AGACC-A--TGTTACTAATCCCAAGGGGTCACTCGTCTTCACCCCAAGCCACTGTCAGACCAGTTGATCATCAGTCAATGCCAGGCCATGAGAGTC-ACATG-CACCAGGCACTAGAAATACACATCCAGGGGCCAAGCAGAGGAGGCACGCTCAGCA-GATCTGG-ACTTCGGTGTTTCTGCCAGGCCTCCCACCTCACTTTATACGCCC------CTCTGgg-------caggcaggcagaggggaACTTGGAGTCAGTCAGCTGGCTTCT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72141083 602 - 125710982 GCTCCCCTAGAAGCTCTGTGCCCAGACAAAGTGA-ACAATGGCAAAACAT-GTGCCTCCCAGCACTCACCTCCCCACCTCCCTTCTAACATCAGAAATGGGT--------------------------TTTTGCTGAT-GGAGAAAATGTAAATGAAATCAACAGAA-GATGATCCTGTGA-GTAATCTGACAAGGGAGAACTAGCTTCCTCTCCCATGAACCCC------AGCTGTCTTGGCTTCCACCCAGACCCCTGGCCTACCCGGTGTCCTCCCTAGA------------AGGCAGTACTCACCCACACTG-CTGAGGGAGCTGCTGCTTTCTGAGTCTGAAGGCATGGTGGACAGGACGCTGTAGGTAGAACCTGGGGAAAGAGGGG-AGACC-G--TGTTACTAATCCCAAGGGGTCACTCGTCTTCACCCCAAGCCACTGTCAGACCAGTTGATCATCAGTCAATGCCAGGCCATGAGAGCC-ACATG-CACCAGGCACTAGAAATACACATCCAGGGGCCAAGCAGAGGAGGCACGCTCAGCA-GATCTGG-ACTTCGGTGTTTCTGCCAGGCCTCCCACCTCACTTTATACGCCCCTCCTGCTCTGGG-------CAGGCGGGCAGAGGGGAACTTGGAGTCAGTCAGCTGGCTTCT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75600830 588 - 121768101 GCTCCTCTAGAAGCCCTGTACCCTGACAAAGTAA-ACAATGGCAAAACAT-GTACCTCCCAGCACTCACCTCCCCACCTCCCTTCTAACATCAGAACTG----------------------------------------GGAAAAAGTGTAAATGAAATCAACAGAA-GATGATCCTGTGAGGTACTCTGACAAGGGAGGGCCACCTTCCTCTCCCATGAACCCC------AGCTGCCCTGGCTCCCACCCTGACCCCTGGCCCACCCAGTGTCCTCCCCAGA------------AGGCGGTACTCACCCACACTG-CTGAGGGAGCTGCTGCTTTCTGAGTCTGAGGGCATGGTGGATAGGACGCTATAGGTAGAACCTGGGAAAAGAGGGG-AGACC-A--TGTTACTAACCCCAAGGGGTCACTCATCTTCACCCAAAGCCACTGTCAGGCCAGCTGATCATCAGTCAATGCCAGGCCATGAGAGCC-ACATG-CACCAGGCACTAGAAATCCACATGT-GGGGCCCAGCAGAGGCGGCGCACTCAGCA-GATCTGG-A-GTCGGTGTTTCTGCCCAGCCTCACACCTCACTTTATTGGCCCCTCCTCCTCTGGG-------TGGGTGGGCAGAGGGGAACTTGGAATCAGTCAGCTGGCTTCT i calJac3.chr12 C 0 C 0 s mm10.chr14 24202061 529 + 124902244 ACTCACTG------CTCACACCCTAAAGAAGTG--ATAAGGAAGGCAGAC-GTGTCTCCCA-CACCCACCTC-----------TCTAATACCAAACCCTGAC--------------------------TGTTGTTGACAAAAGAAAACGAGAACTGTACCATCAGAG-GAGGACTTCACAC-ATAATCAGATA---GAGGACTGCTGACCCGTGCCAGGGACCTCCTCCCAGGCCATCCCTGCTCAAGATCCAAGCCACAGCCT------TGTC--CCCAGGA------------AGGAAGCACTCACCCACACTG-CTGAGGGAGCTGCTGCTCTCCGAGTCTGAGGGCATGATGGACAGGACGCTGTAGGTGGACCCTGGGGACAGAAAGG-GAACCAA--TGTCACTAA-CCAGACAGGCCACTCTGCCACAGCCCACTCTGCT------------------------ATGTCAGCCCGC-----------TA-CACCAGGC-CTGGGAACCTGTAGCCA--GGTCAAG--AGGGAGATGTGGTGGGCA-GACTTGGCACCTTG-------TGCCCACCTTTTTTCTTCACAC--TCACACCCTGCTGCTCTGAG-------CAGTTG-GTAGAGGGAAGTCC--AGGCTGCCagctgccttct i mm10.chr14 C 0 I 564 s canFam3.chr4 27757752 596 + 88276631 GCTCACTGAGAAGTCCCATGCCCTGACCAAGAGAGGGAAGGGGGAGACACAGCCTCCCCCAGCACCTGCCTC--------CCTGCTAACACCAGAACCAGATTCCTGCCCTCCACCGTCACGAGGACGTCCTGCTGATGGGAGAAGGTGTGAATGGCATCAACAGAA-GATGGCCCCACAA-ATGATCTGACAGGGGAGTCCGACTTCCCACCCCCCAGACTCGG------GGCCACGTCGGCTCGCACCCAGCTGCCCGACCCGCCCGGTGCCCTCCAGGAAGGAGGGGTGCCCAGGTGGTACTCACCCACACTG-CTGAGGGAGCTGCTGCTTTCTGAGTCTGAGGGCATGATGGATAAGACGCTGTAGGTGGAGCCTGGGGACAGAAGGACAGACC-GTTTGTTACTAA-----------------------CCCCAAACTACTGTCAGGCCAGCTGATCTTCGGTCAACACCACAC--TGAGAACCAACACGACGTCAGTGACCAGAAGTCGGACGTAAGGGGCCAGGCAGGGGTGG-----TCAGCAGGGTCTAG-TCTGTGGTATTTCTGCGGGGCCTCTCACCTCAC--------------CTGCCCTGGAGACTTATCTAACGCACAG--------TCGGAGCCAATCAGTTGGCTTCT i canFam3.chr4 C 0 C 0 a score=135388.000000 s hg38.chr10_KI270825v1_alt 108152 41 + 188315 TG--TTGGGACATCTGGGGAAAGGCTTAGCAAGGGAGTGACAT s panTro4.chr10 76486207 41 + 133524379 TG--TTGGGACATCTGGGGAAAGGCTTAGCAAGGGAGTGACAT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76148611 42 - 133410057 TGA-ATGGGACATCTGGGGAAAGGCTTAGCAAGGGAGTCACAT i ponAbe2.chr10 C 0 I 9 s nomLeu3.chr18 35090353 41 + 104879549 TG--TTGGGACATCTGGGGAAAGGCTTAGCAAGGGAGTGACAT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73884947 41 - 130959383 TG--TTGGGACATCTGGGGAAAGGTTTAGCAAGGCAGTGACAT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75445620 41 - 133195287 TG--TTGGGACATCTGGGGAAAGGTTTAGCAAGGCAGTGACAT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73308963 41 - 125196307 TG--TTGGGATATCTGGGGAAAGGTTTAGCAAGGCAGTGACAT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72141685 41 - 125710982 TG--TTGGGGCATCTGGGGAAACGTTTAGCAAGGCAGTGACAT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75601418 41 - 121768101 TG--TTGGGACATCTGGAGAAAGGCTTAGCAAGGGAGGGACAA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27758348 41 + 88276631 --CCTTAGGATGACTGGGGAAGAGCTTAGCAAGGGAGCAACAT i canFam3.chr4 C 0 C 0 e mm10.chr14 24202590 564 + 124902244 I a score=23828.000000 s hg38.chr10_KI270825v1_alt 108193 7 + 188315 GCCCCAG s panTro4.chr10 76486248 7 + 133524379 GCCCCAG i panTro4.chr10 C 0 C 0 s nomLeu3.chr18 35090394 7 + 104879549 GCCCCAG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73884988 7 - 130959383 GCCCCAG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75445661 7 - 133195287 GCCCCAG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73309004 7 - 125196307 GCCCCAG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72141726 7 - 125710982 GCCCCAG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75601459 7 - 121768101 GTCCCAG i calJac3.chr12 C 0 C 0 s canFam3.chr4 27758389 7 + 88276631 GCCCCAG i canFam3.chr4 C 0 C 0 e mm10.chr14 24202590 564 + 124902244 I e ponAbe2.chr10 76148653 9 - 133410057 I a score=151696.000000 s hg38.chr10_KI270825v1_alt 108200 46 + 188315 GTAAACATGGGGTGTGGGGGTTTCCTCCACATCTCTAGCAATATGA s panTro4.chr10 76486255 46 + 133524379 GTAAACATGGGGTGTGGGGGTTTCCTCCACATCTCTATCAATATGA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76148662 46 - 133410057 GTAAACATGGGGTGTGGGGATTTCCTCCACATCTCTATCAATATGA i ponAbe2.chr10 I 9 I 434 s nomLeu3.chr18 35090401 46 + 104879549 GTAAACATGGGGTGTGGGGGTTTCCTCCAGATTTCTATCAATGTGA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73884995 46 - 130959383 GTAAACATGGGATGTGAGGGTTTCCTACAGATCTCTATCAATATGA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75445668 46 - 133195287 GTAAACATGGGATGTGAGGGTTTCCTACAGATCTCTATCAATATGA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73309011 46 - 125196307 GTAAACATGGGGTGTGAGGGTTTCCTAAAGATCTCTATCAATATGA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72141733 46 - 125710982 GTAAACATGGGGTGTGAGGGTTTCCTACAGATCTCTATTAATATGA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75601466 46 - 121768101 GTAAGGATAGGGTATGGGAGTTTCCTACAGATCTCTATCAATATGA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27758396 46 + 88276631 GTTAAAACAGGGTCTGGGGATTTCCTCCGGGTCTTTATCAGTTTGA i canFam3.chr4 C 0 C 0 e mm10.chr14 24202590 564 + 124902244 I a score=177774.000000 s hg38.chr10_KI270825v1_alt 108246 72 + 188315 TTCTGGCTTCCATGCAGAGGGTAACAGAGCAGAAATTAAAGAACAACT--GAACTATCTGTTCTTTCT--CTGACT s panTro4.chr10 76486301 72 + 133524379 TTCTGGCTTCCATGCAGACGGTAACAGAGCAGAAATTAAAGAACAACT--GAACTATCTGTTCTTTCT--CTGACT i panTro4.chr10 C 0 C 0 s nomLeu3.chr18 35090447 72 + 104879549 TTCTGGCTTCCATGCAGAGGGTAACAGAGCAGAAATTAAACAACAACT--GAACTATCTGTTCTTTCT--CTGACT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73885041 68 - 130959383 TTCTGGCTTCCATGC-GGGGGTAACAGAGCAGAAATTA---AACAACT--GAACTATCTGTTCTTTCT--CTGACT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75445714 69 - 133195287 TTCTGGCTTCCATGCAGGGGGTAACAGAGCAGAAATTA---AACAACT--GAACTATCTGTTCTTTCT--CTGACT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73309057 69 - 125196307 TTCTGGCTTCCATGCAGGGGGTAAcagaacagaaatta---aacaact--gAACTATCTGTTCTTTCT--CTGACT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72141779 69 - 125710982 TTCTGGCTTCCATGCAGGGGGTAACAGAGCAGAAATTA---AACAACT--GAACTATCTGTTCTTTCT--CTGACT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75601512 69 - 121768101 TTCTGACTTCCACGAGGAGGGTAACAGAGCAGAAGTTAAACAACAACT--GAACTATCTTTTCTTTTT--CTG--- i calJac3.chr12 C 0 C 0 s canFam3.chr4 27758442 73 + 88276631 TGCCAGCATCCATGCAGAGAGCGACAGAGCAGAAGTTA---CACATCTACGAACTATGTGTTCTTTTTGCTCGACT i canFam3.chr4 C 0 C 0 e mm10.chr14 24202590 564 + 124902244 I e ponAbe2.chr10 76148708 434 - 133410057 I a score=205312.000000 s hg38.chr10_KI270825v1_alt 108318 74 + 188315 GTTCTGCTCTTTAGGTTCTAACTGTATTCAAGCTCAGTTCTTAATAATTTACTTAGTATCTGCCCCCTTATTAA s panTro4.chr10 76486373 74 + 133524379 GTTCTGCTCTTTAGGTTCTAACTGTATTCAAGCTCAGTTCTTAATAATTTAGTTAGTATCTGCCCCCTTATTAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76149142 71 - 133410057 GTTCGGCTCTTTAAGCTTCAACTGTATTAAAGTTCAGTTC-TAATAATTTA-TTAGTATCTG-CCCCTTATAAA i ponAbe2.chr10 I 434 C 0 s nomLeu3.chr18 35090519 74 + 104879549 GTTCTGCTCTTTATGTTCTAACTGTATTCAAGCTCAGTTCTTAATAATTTAGTTAGTATCTGCCCCCTTATTAA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73885109 72 - 130959383 GCTCTGCTC-TTAGGTTCTAACTGTATTCAAGCTCAGTTCTTAACAATTTAGTTAGCATCT-CCCCCATATTAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75445783 72 - 133195287 GCTCTGCTC-TTAGGTTCTAACTGTATTCAAGCTCAGTTCTTAACAATTTAGTTAGCATCT-CCCCCATATTAA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73309126 73 - 125196307 GCTCTGCTC-TTAGGTTCTAACTGTATTCAAGCTCAGTTCTTAACAATTTAGTTAGCATCTGCCCCTTTATTAA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72141848 73 - 125710982 GCTCTGCTC-TTAGGTTCTAACTGTATTCAAGCTCAGTTCTTAACAATTTAGTTAGCATCTGCCCCCTTATTAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75601581 71 - 121768101 -TTTTGCTC-TTAGGCTCTAACTGTATT-AAGTTCAGTTCTCAATAATTTAGTTAGTAACTGTCCCCTTATTAA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27758515 69 + 88276631 GTTCTGCTC--TCGGGTCTGAATGTATTCCAGCTCGGTCCTTACTAATGTGGTCAGGGACTGCCCCCTTAT--- i canFam3.chr4 C 0 C 0 e mm10.chr14 24202590 564 + 124902244 I a score=255235.000000 s hg38.chr10_KI270825v1_alt 108392 85 + 188315 AAGTTACTCCTAAAATGATGAGCAATTGTACCATCACCAAAGCCAGAGGGTAGCA------CTTTTTTTT------GTCCACACTT-----------------------------------AATGTTAATT-C s panTro4.chr10 76486447 85 + 133524379 AAGTTACTCCTAAAATGATGAGCAATTATACCATCACCAAAGCCAGAGGGTAGCA------CTTTTTTTT------GTCCACACTT-----------------------------------AATGTTAATT-C i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76149213 84 - 133410057 AAG-TACTCCTAAAATGATGAGCAATTATCCCATCACCAAAGCTAGAGGGTAGCA------CTTTTTTTG------GTCCACACTT------------------------------------ATGTTAATTCC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35090593 85 + 104879549 AAGTTACTCCTAAAATGATGAGCAATTATACCATCGCCAAAGCCAGAGGGTAGCA------CTTTTTTTT------GTCCACACTT-----------------------------------AATGTTAATC-C i nomLeu3.chr18 C 0 M 151 s rheMac3.chr9 73885181 87 - 130959383 AAGTTACTCCTAAAATGATAAGCAATTATACCATCAGCAAAGTCAGAGGGTAGCA------CTTTTTTTT----TTGTTCACACTT-----------------------------------AATGTTAATT-C i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75445855 87 - 133195287 AAGTTACTCCTAAAATGATAAGCAATTATACCATCAGCAAAGTCAGAGGGTAGCA------CTTTTTTTT----TTGTTCACACTT-----------------------------------AATGTTAATT-C i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73309199 87 - 125196307 AAGTTACTCCTAAAATGATAAGCAATTATACCATCAGCAAAGTCAGAgggtagca------ctttttttt----ttgtccacaCTT-----------------------------------AATGTTAATT-C i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72141921 87 - 125710982 AAGTTACTCCTAAAATGATAAGCAATTATACCATCAGCAAAGTCAGAGGGTAGCA------CTTTTTTTT----TGGTCCACACTT-----------------------------------AATGTTAATT-C i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75601652 85 - 121768101 AAGTTACTCCTAAAATGATGAGCAATTATACCATCACCAAAGCCACAAGGTAGCA------CTTTTTTTG------GTCCACACTT-----------------------------------AACATTAATT-C i calJac3.chr12 C 0 C 0 s mm10.chr14 24203154 125 + 124902244 AAGTTACCTAAAAACTGAAGAGCAATCACAACGCTGCCCAAACT-GAGAGTAGAC------ATTTTGTTTGATGTGATTCCCACCTGGGGGAGGGTAGGAGCAGGGGGTGCGCAGGCCCCCAACGTCGTTC-A i mm10.chr14 I 564 I 1 s canFam3.chr4 27758584 63 + 88276631 ----------------------------TACTGTCACCAAAGCCAAGGAGCAGCACGTGCCCCTTTTCTG------GCCGACACTT-----------------------------------AATGTTAACT-C i canFam3.chr4 C 0 C 0 a score=658074.000000 s hg38.chr10_KI270825v1_alt 108477 292 + 188315 CTGGTTGTGGACACACAAC-------CACTGTGGTTTGGTTTGAATTCAAATAT-CTTCAAAACCA-GATGTTACCCTCCC-AGCACcgg-----------------gaagcccagtttctgaacctagc-----tctatgt--aggtgcc-------catagctgggtcgtgctgagcaa-gtagcttttgttttctggaactctgtttcctggtctgcaaaatgaaggagttcaaccagatggcttataaggtccctaccccatcccccatcccccatcccccatcccatttcagcaa------tttccatgattAATGGAAACAGAAGGTACACTTT s panTro4.chr10 76486532 285 + 133524379 CTGGTTGTGGACACACAAC-------CACTGTGGTTTGGTTTGAATTCAAATAT-CTTCAAAACCA-GATGTTACCCTCCC-AGCACcgg-----------------gaagcccagtttctgaacctagc-----tctatgt--aggtgcc-------catagctgggtcgtgctgagcaa-gtagcttttgttttctggaactctgtttcctggtctgcaaaatgaaggagttcaaccagatggcttataaggtccc-------tcccCCATCCTCCATCccccatcccatttcagcaa------tttccatgattaatggaaacagaaggtacacttt i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76149297 286 - 133410057 CTGGGTGTGGACACACAAC-------CACTGTGGTTT-GTTTGAATTCAAATAT-CTTCAAAACCA-GATGTTACCCTCCC-AGCACcgg-----------------gaagcccagtttctgaacctagc-----tctatgt--aggtgcc-------catagctgggtcgtgctgagcaatttagcttttgttttctggaactctgtttcctggtctgcaaaatgaaggagttcaactagatggcttataaggtccct------cccCCCATCCCCCATCccccatcccatttcagcaa------tttccatgattaacggaaacagaaggtacacttc i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73885268 276 - 130959383 CTGGTAGTGGACACACAAC-------CACTGTGGTTTGGTTTGAATTCAAATAT-TTTCAAAACCA-GATGTTACCCTCCC-AGCAAcag-----------------gaagcccagtttctgaacctagc-----tctatgt--aggtgcc-------catagctgggtcgtgctgagcaa-gtagcttttgttttctggaactctgtttcctggtctgcaaaatgaaggagttcaaccagatggcttataaggtccc---------------------tctcccatcccatttcagcaat-tacgtttccatgattaacagaaacagaaggtatgcttt i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75445942 276 - 133195287 CTGGTAGTGGACACACAAC-------CACTGTGGTTTGGTTTGAATTCAAATAT-TTTCAAAACCA-GATGTTACCCTCCC-AGCACcag-----------------gaagcccagtttctgaacctagc-----tctatgt--aggtgcc-------catagctgggtcgtgctgagcaa-gtagcttttgttttctggaactctgtttcctggtctgcaaaatgaaggagttcaaccagatggcttataaggtccc---------------------tctcccatcccatttcagcaat-tacgtttccatgattaacagaaacagaaggtatgcttt i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73309286 276 - 125196307 CTGGTTGTGGACACACAAC-------CACTGTGGTTTGGTttgaattcaaatat-tttcaaaacca-gATGTTACCCTCCC-AGCACCAG-----------------GAAGCCCAGTTTCTGAACCTAGC-----TCTATGT--AGGTGCC-------CATAGCTGGGTCGTGCTGAGCAA-GTAGCTTTTGTTTTCTGGAACTCTGTTTCCTGGTCTGCAAAATGAAGGAGTTCAACCAGATGGCTTATAAGGTCCC---------------------TCTCCCATCCCATTTCAGCAAT-TACGTTTCCATGATTAACAGAAACAGAAGGTATGCTTT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72142008 274 - 125710982 CTGGTTGTGGACACACAAC-------CACTGTGGTTTGGTTTGAATTCAAATAT-TTTCAAAACCA-GATGTTACCCTCCC-AGCACcag-----------------gaagcccagtttctgaacctagc-----tctatgt--aggtgcc-------catagctgggtcgtgctgagcaa-gtagc--ttgttttctggaactctgtttcctggtctgcaaaatgaaggagttcaaccaaatggcttataaggtccc---------------------tctcccaccccatttcagcaat-tatatttccatgattAACAGAAACAGAAGGTATGCTTT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75601737 261 - 121768101 CTAGTTGTGGACACACAAC-------CATTGTGGTTTGGTTTGAATTCAAATAT-TTTCAAAACCA-GATGTTACCCGTCC-AGCACGGT-----------------GAAGCCCGGTTTCTGAACCTAGC-----TCTATGT--AGGTGCC-------CACAGCTGGGACATGCTGAGCAA-GTCgct---------------tctgtttcctggtttgcaaaacgaaggagttcagccaggcaacttataaggcccc---------------------tcccCCATCCTATTTCAGTAAT-TATATTTTCATGATTAACGGAAACCGAAGGTGCGTTTT i calJac3.chr12 C 0 C 0 s mm10.chr14 24203280 253 + 124902244 CTA-CTGTGTGCATACCGC-------CATCAGGGTTTAGT-----CTCAACTATCTTTCAATACTA-GGTG-CAGCCTGCC-AGCTTCAG-----------------GAA-----------TAAATAAGC-----TATGTGTTGAGATGCTGGGTCAGCAGCACTCGG-CATACTAAGCAA---AGCACCTGGCCTCCTGGACCCTGGGTCC-ACCCTGTGTGAGGAGGAGGCTGGGCCTCACG------AAAGCTCC---------------------TGCCCCCTTGCA--TCAGTGA--CATGTCACACTGAT--GTGAAAACCAAGTGTGCATATT i mm10.chr14 I 1 C 0 s canFam3.chr4 27758647 282 + 88276631 CTGGTGTTAGAGGCACAACCGTACCACACCACAGTTCAGTCTGAACATGAGCAT-TTTCTAAGCCAGGAGGCTACCCACCTGGGCACCAGTGTAACCTCTGGGTGAAGAAACCCCATTTCCAAACC-AGCTCTCGTCTACGC--AGG-----------AGGAGCTGGGTCACACTGAGCAG-GTCGT--TTGCTTTCCGGAGCTCTGCTCCCTGGCCTGT------ACGGAGCTTCAGCCGACGGCTTGTAAGGTCCTC--------------------TCTCCCGTCTTATTTTAGGGTCACACTCTCCCCTGAT--------------GGCATGTTTT i canFam3.chr4 C 0 C 0 e nomLeu3.chr18 35090678 151 + 104879549 M a score=968174.000000 s hg38.chr10_KI270825v1_alt 108769 273 + 188315 GCTCATCAAGACTATGGATGACATAAAATTAAAAGGGAGGGCAAACTG---------ACTCAGAGACTAAATTGGGAGTGG--ACAA-AGCATAACACACAGAGATGGCAGGTCAGATAAAACAAGGAC-------AAATCCAGTGTTTTGTTCTTGGAGCCAAAAGAACTATACAATGAAGAGCGGTATGTACCAGGCCAAGTGGGTGAGCTGGAGATGGAATTTTTGCAATAAGGGCTTTGAACAAGCCTTAGGGCTCTGGCATCAGAAAGCTGCCAAGAACTAATGAGA s panTro4.chr10 76486817 273 + 133524379 gctcatcaagactatggatgacataaaattaaaagggagggcaaactg---------actcagagactaaattgggagtgg--acaa-agcataacacacagagatggcaggtcagataaaacaaggac-------aaatccagtgttttgttcttggagccaaaagaactatacaatgaagagcggtatgtaccaggccaagtgggtgagctggagatggaatttttgcaataagggctttgaacaagccttagggctctggcgtcagaaagctgccaagaactaatgaga i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76149583 273 - 133410057 gctcatcaagactatggatgacataaaattaaaagggagggcaaactg---------actcagagactaaattgggagtgg--acaa-agcataacacacagagatggcaggtcagataaaacaaggac-------gaatccagtgttttgctcttggagccaaaagaactatacaatgaagagcggtatgtaccaggccaagtgggtgagctggagatggaatttttgcaataagggctttgaacaagccttagggctctggcgtcagaaagctgccaagaactaatgaga i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35090832 269 + 104879549 GCTCTTCTAGACTATGGATGACATAAAATTAAAAGGGAGGGCAAACTG---------ACTCAGATACTAAATTGGGAGTGG--ACAA-ATTATAACACGCAGAGATGGCAGGCCAAATAAAACAAGGAC-------GAATCCAGTGTTTTGTTCTTGGAGCCAAAAGAACTATACAATGAAGAGCGGTATGTACCACGCCAAGTGGGTGAGCTGGAGATGGAATTTTTGCAATAAGAGCTTTAAACAAGCCTTAAGGCTCTGGCATC----ACCTGCCAAAAACTAATGAAA i nomLeu3.chr18 M 151 C 0 s rheMac3.chr9 73885544 270 - 130959383 gc---tcaagactatggatgacataaaattaaaagggagggcaaactg---------actcagagactaaattgggagtgg--acaa-agcataacacacagagatggcaggtcaaataaaacaaggac-------gaatccagtgttttgttcttggagccaaaataactatacaatgaagagcagtatgtaccaggccaagtgggtgagttggagacggaatttttgcaataagggctttgaacaagccttagggctcttgtgtcagaaagctgccaagaactaatgaga i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75446218 270 - 133195287 gc---tcaagactatggatgacataaaattaaaagggagggcaaactg---------actcagagactaaattgggagtgg--acaa-agcataacacacagagatggcaggtcaaataaaacaaggac-------gaatccagtgttttgttcttggagccaaaataactatacaatgaagagcagtatgtaccaggccaagtgggtgagttggagacggaatttttgcaataagggctttgaacaagccttagggctctagtgtcagaaagctgccaagaactaatgaga i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73309562 270 - 125196307 GC---TCAAGACTATGGATGACATAAAATTAAAAGGGAGGGCAAACTG---------ACTCAGAGACTAAATTGGGAGTGG--ACAA-AGCATAACACACAGAGATGGCAAGTCAAATAAAACAAGGAC-------GAATCCAGTGTTTTGTTCTTGGAGCCAAAATAACTATACAATGAAGAGCAGTATGTACCAGGCCAAGTGGGTGAGTTGGAGACGGAATTTTTGCAATAAGGGCTTTGAACAAGCCTTAGGGCTCTAGTGTCAGAAAGCTGCCAAGAACTAATGAGA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72142282 269 - 125710982 GC---TCAAGACTATGGATGACAT-AAATTAAAAGGGAGGGCAAACTG---------ACTCAGAGACTAAATTGGGAGTGG--ACAA-AGTATAACACACAGAGATGGCAGGTCAAATAAAACAAGGAC-------GAATCCAGTGTTTTGTTCTTGGAGCCAAAATAACTATACAATGAAGAGCAGTATGTACCAGGCCAAGTGGGTGAGTTGGAGACGGAATTTTTGCAATAAGGGCTTTGAACAAGCCTTAGGGCTCTAGCGTCAGAAAGCTGCCAAGAACTAATGAGA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75601998 272 - 121768101 GCTCATCAAGACCATGGATGACACAAAATTAAAAGAGAGGGCAAACTG---------ACTCAGAGACTAAATTGGGAGGGG--ACAA-AGCATAATATGCAGAGATGGCAGGTCAAAGAAAACAAGGAC-------GAATACAGTGTTTTGTTCCTGGAGCCAAAAGAACTATACAATGAAGAGCGGTATGTACCAGGCCAAGTGGGTGAGCTGGAGATGGAA-TTTTGCAATAAGGGCTTTGAACAAGCCTTAGGGCTCTGGCATCAGAAAGCTGCCAAGAACTAATGAGA i calJac3.chr12 C 0 C 0 s mm10.chr14 24203533 244 + 124902244 GCTCTCTGAGGCCATAGCTGATGCAAAGTTAAAGAAGAAGTCAAAGCAATGCCAGCCACTGGGAGACGGCACGGTGGGCTGCAGAAA-AGCATGCCAGGCAGGGGTGGCAGGTTACCCAACACAGCACC-------AAGGGGAATGTCTTGTTCCTAGA--------------------------------------ACCAGGTGGCTGAGC--ACAGCTAAGGTTTTGCTGTAGGGCCCCTGAACAAGCCTTGGGGCTCTGACATTAGAATGCTGTGGAGAATTACCCAGA i mm10.chr14 C 0 I 1447 s canFam3.chr4 27758929 270 + 88276631 GC---TTGTGACTACAGGTGACACCAAGTTA-----GAGGGAGAACCG---------CCTCCAAGACTACCTCAGGAGCTG--AGAAGAGCACCACGTGCACAGGTGG-AGGTCAAGGAAATCCAGGCAACGGCCGGAATGCAGTATTTTGCCCTTGGAACCGAAAGCCCTACAGAGTGAAGAGGTGTGTGCAGCGGGCAGAGTGG-TGA-CTAGAGATGGGGTTTTTGCAGGAAAGCCTTTGAACGAGCCTCGGGGCCCTGATGTGGAAAAGCAGCCAAGAACTCATGAGC i canFam3.chr4 C 0 C 0 a score=228050.000000 s hg38.chr10_KI270825v1_alt 109042 70 + 188315 TCCTGGGCTCCACAACAAGAAATGTGGAGGACCACATTTAAGG---AGCTCCCAgcagggcacggtggctcac s panTro4.chr10 76487090 70 + 133524379 tcctgggctccacaaccagaaatgtgggggaccacatttaagg---agCTCCCAgcagggcacggtggctcac i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76149856 69 - 133410057 tcctgggctccacaaccagaaatgtgg-ggaccaaatttaagg---agCTCCCagcagggcacggtggctcac i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35091101 69 + 104879549 TCCTGGGCTCCACAACCAGAAATGTGG-GGACCAAATTTAAGG---AGCTCCCAACATggtgcggtggctcac i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73885814 69 - 130959383 tcctgggctccacaaccagaaatgtgg-ggaccaaatttaagg---agCTCCCAgtcgggcgcagtggctcac i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75446488 69 - 133195287 tcctgggctccacaaccagaaatgtgg-ggaccaaatttaagg---agCTCCCAgtcgggcgcagtggctcac i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73309832 69 - 125196307 TCCTGGGCTCCACAACCAGAAATGTGG-GGACCAAATTTAAGG---AGCTCccagtcgggcgcagtggctcac i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72142551 69 - 125710982 TCCTGGGCTCCACAGCCAGAAATGTGG-GGACCAAATTTAAGG---AGCTCCCAGTTgggcacagtggctcac i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75602270 69 - 121768101 TCCTGGACTCCGGAACCAGAAATGTAG-GGACCAAATTTAAGG---AGCTCCCAgctgggcacagtggctcac i calJac3.chr12 C 0 C 0 s canFam3.chr4 27759199 72 + 88276631 TCTAGGGCTCCGGGACCAGAAACGTGG-GGGCCAGATTGAAGGTTTCTCTCCTACCACAACTCAGCTGCTTAC i canFam3.chr4 C 0 I 24 e mm10.chr14 24203777 1447 + 124902244 I a score=1333481.000000 s hg38.chr10_KI270825v1_alt 109112 469 + 188315 acctataatcccagtgctttgggaggccaaggtgggcagattgcttcagctcaggagtttgagaccagcctgggcaacatagtgaaactccatctctataaaaaatacaaaaaattagctgggcgtggtggcacgcacctgtaatcccagctacctgggagtctgaggtgggaggatcacctaagcccagggaagtcaaggctgcagtgagccatgatcatgccactgcacttcagcctgggcaacaaagtgagatcctgtctc-------------------agaaaaaaaaaacaaaaaaCACTCTTCCACTGCAATTCTTGACTAGCCACCCTACACGCATCTTTGGACGGGAAAGAGGAGAAATGAAGAAATGGGGGTAAATGGGGGAGCGGGGCAGGGGAGGGAGATGCACTGTAGGTGGGAGGCCCCTGGGGGACAGGAGAGACCTTGAGGGGAAAGCAGGGAGACTTTGCTGGGGAGGTGA s panTro4.chr10 76487160 470 + 133524379 acctataatcccagtgctttgggaggccgaggtgggcagattgcttcagctcaggagtttgagaccagcctgggcaacacagtgaaactccatctctataaaaaatacaaaaaattagctgggcgtggtggcacgcacctgtaatcccagctacctgggagtctgaggtgggaggatcacctaagcccagggaagtcaaggctgcagtgagccatgatcatgccactgcacttcagcctgggcaacaaagtgagatcctgtctc------------------aaaaaaaaaaaaaaaaaaaaCACTCTTCCACTGCAATTCTTGACTAGCCACCCTACACGCATCTTTGGACGGGAAAGAGGAGAAATGAAGAAATGGGGGTAAATGGGGGAGCGGGGCAGGGGAGGGAGATGCACAGTAGGTGGGAGGCCCCTGGGGGACAGGAGAGACCTTGAGGGGAAAGCAGGGAGACTTTGCTGGGGAGGTGA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76149925 463 - 133410057 accgataatctcagtgctttgggaggccgaggtgggcagattgcttcagctcaggagtttgagaccagcctgggcaacatagtgaaactccatctctacaaaaaatacaaaaaattagctgggcgtggtggcacacatctgtagtcccagctacctgggagtctgagatgggaggatcacctgagcccagggaagtcaaggctgcagtgagccatgatcatgccactgcacttcagcctgggcaacaaagtgagatcctgtctc------------------------aaaaaaaaaaaaaaCACTCTTCCACTGCAATTCTTGACTAGCCACCCTACACGCATCTTTGGATGGGAAAGAGG-GAAACGAAGAAATGGGAGTAAATGGGGGAGCGGGGTGGGGGAGGGAGACGCACAGTAGGTGGGAGGCCCCTGGGGGACAGGAGAGACCTTGAGGGGAAAGCAGGGAGACTTTGCTGGGGAGGTGA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35091170 462 + 104879549 acctataatcccagtgctttgggaggccaaggtgggcagattgcttcagctcaggagtttgagaccatcctgggcaacatggtgaaactccatctctacaaaaaatacaaaaaattagctgggcatggtggcacgcacctgtagtcccagctacctgggagtctgaagtgggaggatcacctgagcccagggaagtcaaggctgcagtgagccatgatcatgtcactgcacttcagcctgggcaacaaagtgagatcctgtctc--------------------------aaaaaaaaaaaaCACTCTTCCACTGCAATTCTTGACTAGCCACCCTACATGCATCTTTGGACGGGAAAGAGGAGAAATGAAGAAATGGGGGTAAATGGGGGAGCGGGGCAGGGGAGGGAGATGCACAGTAGGTGGGAGGCCCCTGGGGGACAGGAGAGACCTTGAGGGGAAAGCAGGGAGACTTTGCTGGGGAGGCGA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73885883 467 - 130959383 atctataatcccagtgctttgggaggcagagataggcagattgcttcagctcaggagttcgagaccagcctgggcaacatggtgaaactccatctctacaaaaaatacaaaaaattagctgggcgtggtggcagtcacctctagtcccagctacctgggagtctgaggtgggaggatcacctgagcccggggaggtcaaggctgcagtgggccatgatcatgccact-cacttcagcctgggcaacgaggtgagatcccatctc-------------aaaaaaaaaaaaaaaaaaaaaaaaCCACTCTTCCACTGCAATTCTTGACTAGCCACCCTACACGCATCTTTGAACGGAAAAGAGGAGAAATGAAGAAATGGGGGTAAAC--GGGAGCAG----GGGGAGGGAGATGCACGGTAGGTGGGAGGCCCCT-GGGGACAGAAGAGACCTTGAGGGGAAAGCAGGGAGACTTTGCTGGGGAGGTGA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75446557 461 - 133195287 atctataatcccagtgctttgggaggcagagatgggcagattgcttcagctcaggagtttgagaccagcctgggcaacatggtgaaacttcatctctacaaaaaatacaaaaaattagctgggcgtggtggcagtcacctctagtcccagctacctgggagtctgaggtgggaggatcacctgagcccggggaggtcaaggctgcagtgggccatgatcatgccact-cacttcagcctgggcaacgaagtgagatcccatctc-------------------aaaaaaaaaaaaaaaaaaCCACTCTTCCACTGCAATTCTTGACTAGCCACCCTACACGCATCTTTGAACGGAAAAGAGGAGAAATGAAGAAATGGGGGTAAAC--GGGAGCAG----GGGGAGGGAGATGCACGGTAGGTGGGAGGCCCCT-GGGGACAGAAGAGACCTTGAGGGGAAAGCAGGGAGACTTTGCTGGGGAGGTGA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73309901 462 - 125196307 atctataatcccagtgctttgggaggcagagatgggcagattgcttcagctcaggagtttgagaccagcctgggcaacatggtgaaactccatctctacaaaaaatacaaaaaattagctgggcgtggtggcactcacctctagtcccagctacctgggagtctgaggtgggaggatcacctgagcccggggaggtcaaggctgcagtgggccatgatcatgccact-cacttcagcctgggcaacgaagtgagatcccatctc------------------aaaaaaaagaaaaaaaaaaccactcttcCACTGCAATTCTTGACAAGCCACCCTACACGCATCTTTGAACGGAAaagaggagaaatgaagaaatggggGTAaac--gggagcag----gaggagggagatgCAGGGTAGGTGGGAGGCCCCT-GGGGACAGGAGAgaccttgaggggaaagcagggaGACTTTGCTGGGGAGGTGA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72142620 480 - 125710982 gcctataatcccagtgctttgagaggctgagatgggcagattgcttcagctcaggagtttgagaccagcctgggcaacatggtgaaactccatctctacaaaaaatacaaaaaattagctgggtgtggtggcactcacctctagttccagctacctgggagtctgaggtgggatgatcacctgagccctgggaggtcaaggctgcagtgggccatgatcatgccact-cacttcagcctgggcaacgaagtgagatcccatctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaCACTCTTCCACTGCAATTCTTGACTAGCCACCCTACACGCATCTTTGAACAGAAAAGAGGAGAAATGAAGAAATGGGGGTAAAC--GGGAGCAG----GGGGAGGGAGAGGCATGGTAGGTGGGAGGCCCCT-GGGGACAGGAGAGACCTTGAGAGGAAAGCAGGGAGACTCTGCTGGGGAGATGA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75602339 444 - 121768101 gcctataattacagtgctttgggaggctgaggtgggcagattgcctcagctcaggggttcaagaccagccttaggaacatggcgaaactccatctctacaaaaaatacagaaacttagctgggaatggtaacacgcacctatagtcccggctacctgggag------gaaggagaatcacctgagcccggggaggtcaaagctgcaatgagtcatgatcatgccactgcatttcagcctgggcaacagagaaagatcccgtctc-----------------------caaaaaaaaaaaaa----TCTTCCACTGCAACTCTTGACTAG-CACCCCACACACATCTTTGGAAGGGAAAGAGGAGAAATTAAGAAATTGGGGTAA----GGCAG--G----GGAGAGGAAGATGCACAGTAGGTGGGAAGCCCATGGGGGACAGGAGAGACCTTGAGGGGAAAGTGGGGAGACTTTGCTGGGGAGGTGA i calJac3.chr12 C 0 C 0 e canFam3.chr4 27759271 24 + 88276631 I e mm10.chr14 24203777 1447 + 124902244 I a score=671493.000000 s hg38.chr10_KI270825v1_alt 109581 189 + 188315 GGACCATGCAGGAGGGCAGAGAGATAGACTGCAGGCAGGCGAGCTAGCAGGCGTGTCCATCAGAAAAAGAGATGAAGGGGGAGAGAAAAAAGAGA-AAGCAAGCAAAAAGCAACTTTGGTAATGGCAAGCACTAGGACAGGCGTGACCGGCAATGACCAGTAGCCTCATTATCACATTTTCAGAGA--CTCt s panTro4.chr10 76487630 191 + 133524379 GGACCATGCAGGAGGGCAGAGAGATAGACTGCAGGCAGGCGAGCTAACAGGCGTGTCCATCAGAAAAAGAGATGAAGGGGGAGAGAAAAAAGAGA-AAGCAAGCAAAAAGCAACTTTGGTAATGGCAAGCACTAGGACAGGCGTGACCGGCAATGACCAGTAGCCTCATTATCACATTTTCAGAGACTCTCt i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76150388 191 - 133410057 GGACCATGCAGGAGGGCAGAGAGATAGACTGCAGGCAGATGAGCTAGCAGGCATGTCCATCAGAAAAAGAGATGAAGGGGGAGAGAAAAAAGAGA-AAGCAAGCAaaaagcgactttggtaatggcaagcactaggacaggcgtaaccggcaatgaccagtagcctcattatcacattttcagagactctct i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35091632 191 + 104879549 GGACCATGCAGGAGGGCAGAGAGATAGACTGCAGGCAGGTGAGCTAGCAAGCGTGTCCATCAGAAAAAGAGATGAAGGGGGAGAGAAAAAAGAGA-GAGCAAGCAAAAAGCAACTTTGGTAATGGCAAGCACTAGGACAGGCATGACCGGCAATGACCAGTAGCCTCATTATCACATTTTCAGAGACTCTCt i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73886350 192 - 130959383 GGACCATGCAGGAGGGCAGAGAGACAGACTGCAGGCAGGTGAGCTAGCAGGTGTGTCCATCAGAAAAAGAGATGAAGTGGGAGAGAAAAAAGAGACAAGCAAGCAAAAAGCAACTTTGGTAATGGCAAGCACTAGGACAGGCATGACTGGCAATGACCAGTAGCCTCATTATCACATTTTCAGAGACTCTCt i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75447018 192 - 133195287 GGACCATGCAGGAGGGCAGAGAGACAGACTGCAGGCAGGTGAGCTAGCAGGTGTGTCCATCAGAAAAAGAGATGAAGTGGGAGAGAAAAAAGAGACAAGCAAGCAAAAAGCAACTTTGGTAATGGCAAGCACTAGGACAGGCGTGACTGGCAATGACCAGTAGCCTCATTATCACATTTTCAGAGACTCTCt i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73310363 192 - 125196307 GGACCATGCAGGAGGGCAGAGAGACAGACTGCAGGCAGGTGAGCTAGCAGGTGTGTCCATCagaaaaagagatgaagtgggagagaaaaaagagacaagcaagcaaaaagcaaCTTTGGTAATGGCAAGCACTAGGACAGGTGTGACTGGCAATGACCAGTAGCCTCATTATCACATTTTCAGAGACTCTCT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72143100 192 - 125710982 GGACCATGCAGGAGGGCAGAGACACCGACTGCAGGCAGGTGAGCTAGCAGGTGTGTCCATCAGAAAAAGAGATGAAGTGGGAGAGAAAAAAGAGACAAGCAAGCAAAAAGCAACTTTGGTAATGGCAAGCACTAGGACAGGCGTGACTGGCAATGACCAGTAGCCTCATTATCACATTTTCAGAGACTCTCt i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75602783 190 - 121768101 GGATCATGCAGGAGGGCAGAGAGACAGACTGCAGGCAGGTGAGCTAGCTGGCGTGTCCATCAGAAAAAGAGATGAAAGAGGAGAGAAAAAAGAAA-AAGCAAGCAAAAAGCAACTTTGGTAATGGCAAGAACTAGGACAGGAGAGACTGGCAATGACTGGTAGCCTCATTACCACATTTTCAGAGACT-TCt i calJac3.chr12 C 0 C 0 s canFam3.chr4 27759295 182 + 88276631 GGACGGTGAAGGGATGAAGAGATGGGG---GTGTGCAGGGGAGCCAGCAGGCATGCCCACCAGAAAAAGAGATGAAAGCAGAGAACAAAAAGAAA-AACCAAG-GAAAAGGGACTTTGGTAACGGCGAGAACTAGGACAG---TGGCCAGGCATGACTGGTGGCCTCATTATCAAATTTTCTGAGACTCT-- i canFam3.chr4 I 24 I 271 e mm10.chr14 24203777 1447 + 124902244 I a score=6876.000000 s hg38.chr10_KI270825v1_alt 109770 2 + 188315 ga s panTro4.chr10 76487821 2 + 133524379 ga i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76150579 2 - 133410057 ga i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35091823 2 + 104879549 ga i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73886542 2 - 130959383 ga i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75447210 2 - 133195287 ga i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73310555 2 - 125196307 GA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72143292 2 - 125710982 ga i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75602973 2 - 121768101 ga i calJac3.chr12 C 0 C 0 e canFam3.chr4 27759477 271 + 88276631 I e mm10.chr14 24203777 1447 + 124902244 I a score=868541.000000 s hg38.chr10_KI270825v1_alt 109772 277 + 188315 agaatctgaaggcgttgagcatgggctgaagagaatgac-tggggaatgggtaggtgtcttgtctctcaatacgactgtcagaagggattagatttgttcttgatggcctccagcagccaaaccaggagcagcgggtggatgctggagaaagctgcatctctaaacaggtctggatggcc-acggtcagcact-gccaggtatgaaaagcctgagggtgaggggg-------tgagaca-------------gtgagggaggcccagcactc-agtggcatggatgtcatggggaag-tctg s panTro4.chr10 76487823 277 + 133524379 agaatctgaaggcgttgagcatgggctgaagagaatgac-tggggaatgggtaggtgtcttgtctctcaatgcgactgtcagaagggattagatttgttcttgatggcctccagcagccaaaccaggagcagcgggtggatgctggagaaagctgcatctctaaacaggtctggatggcc-acggtcagcact-gccaggtatgaaaagcctgagggtgaggggg-------tgagaga-------------gtgagggaggcccagcactc-agtggcatggatgtcatggggaag-tctg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76150581 277 - 133410057 agaatctgaaggtgttgagcatgggctgaagaggatgac-tggggaatgggtaggtgtcttgtctctcaatacgactgtcggaagggattagatttgttcttgatggcctccagcagccaaaccaggagcagcgggtggatgctggagaaagctgcatctctaaacaggtctggatggcc-acggtcagcact-gccaggtatgaaaagcctaagggtgaggagg-------tgagaga-------------gtgagggaggcccagcactc-agtggcatggatgtcatgaggaag-tctg i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35091825 277 + 104879549 agaatctgaaggcattgagcatgggctgaagaggatgac-tggggaatgggtaggtgtcttgtctctcaatacgactgtcagaagggattagatttgttcttgatggcctccagcagccaaaccaggagcagcaggtggatgctggagaaagCTGCATCTCTAAACAGGTCTGGATGGCC-ACGGTCAGCACT-GCCAGGTGTGAAAAGCCTGAGGGTGAGGGGG-------TGAGAGA-------------GTGAGGGAGACCCAGCACTC-AGAGGCATGGATGTCATGGGGAAG-TCTG i nomLeu3.chr18 C 0 M 198 s rheMac3.chr9 73886544 278 - 130959383 agaatctgaaggcgttgagcatgggctgaagaggatgac-tagggagtgggtagatgtcttgtccctcaatacgactgtcagaagggattaaatttgttcttgatggcctcctgcagccaaaccaggagcagcaggtatatgctggagaaagctgcacctccacacaggtctggatggcc-acagtcagcact-gccaggtatgaaaagcctgggagtgagaggg-------tgaggga-------------gtgagggaggcccagcactcaagtggcatggatgtcatggggaag-tctg i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75447212 278 - 133195287 agaatctgaaggcgttgagcatgggctgaagaggatgac-tagggagtgggtagatgtcttgtccctcaatacgactgtcagaagggattaaatttgttcttgatggcctcctgcagccaaaccaggagcagcaggtatatgctggagaaagCTGCACCTCCACACAGGTCTGGATGGCC-ACAATCAGCACT-GCCAGGTATGAAAAGCCTGGGGGTGAGGGGG-------TGAGGGA-------------GTGAGGGAGGCCCAGCACTCAAGTGGCATGGATGTCATGGGGAAG-TCTG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73310557 278 - 125196307 AGAATCTGAAGGCGTTGAGCATGGGCTGAAAAGGATGAC-TGGGGAGTGGGTAGATGTCTTGTCCCTCAATACAACTGTCAGAAGGGATTAAATTTGTTCTTGATGGCCTCCTGCAGCCAAACCAGGAGCAGCAGGTGGATGCTGGAGAAAGCTGCACCTCCACACAGGTCTGGATGGCC-ACAGTCAGCACT-GCCAGGTATGAAAAgcctgggggtgaggggg-------tgaggga-------------gtgagggaggccCAGCACTCAAGTGGCATGGATGTCATGGGGAAG-TCTG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72143294 270 - 125710982 agaatctgaaggcgttgagcatgggctgaagaggatgac-tggggagtgggtagatgtcttgtcccttaatacgactgtcagaagggattaaatttgttcttgatggcctcctgcagccaaatcaggagcagcaggtggatgctggagaaagCTGCACCTCCACAGAGGTCTGGATGGCC-ATAGTCAGCACT-GCCAGGTATGAAAAGCCTGGGGGTGAGGGG----------------------------GTGAGGGAGGCCCAGCACTCAAGTGGCATGGATGTCATGGGGAAG-TCTG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75602975 269 - 121768101 aggatctgaaggtgttgagcatggactgaggaggatgac-tggggagtgggtaggtgtcttgtccatcagcaggaccaccagaaaggattagatttactcttgatggcctccagcagccaaaccaggagcagtgggtagatgctggagaaagctgcctctctaaacaggtcaggatgacc-acagtcagccgt-gccaagtatgaaaagcctgggggtgag---------------aga-------------gtgagggaggcccagcactc-aggggcatggatgtcatggggaag-tcag i calJac3.chr12 C 0 C 0 s canFam3.chr4 27759748 290 + 88276631 aaaacctgtggatgtttagcatggactgaagaggatgacttagggcgtagacagctgctcggtcttcagatggggctgtca-aagggatcc-atttgtgccatacagcctctggcagcaggactggacatggcaggcaggtgttctagaaagcctc----------gggtgggggcacccaacggtcagggctggctaggtctcaagagagctggggagggcggggccccctcaacacacgccctcactcacttcacggaggccccacgcccacctggcagggaggcctcaggagggttctg i canFam3.chr4 I 271 C 0 e mm10.chr14 24203777 1447 + 124902244 I a score=310745.000000 s hg38.chr10_KI270825v1_alt 110049 118 + 188315 tgcatc---tgaagggagatgaaaccagaaaacccagttcagccttaaaattctatgatcctGCT---AATAATGAATAAC------CCATGCTCCACCTCCCATATCTGAAGTCCAACCCACACTATTA s panTro4.chr10 76488100 118 + 133524379 cgcatc---tgaagggagatgaaaccagaaaacccagttcagccttgaaattctatgatcctGCT---AATAATGAATAAC------CCATGCTCCACCTCCCATATCTGAAGTCCAACCCACACTATTA i panTro4.chr10 C 0 M 1408 s ponAbe2.chr10 76150858 118 - 133410057 cccatc---tgaagggagatgaaaccagaaaacccagttcagccttgaaattctatgatcctGCT---AATAATGAATAAC------CCATGCTCCACCTCCCATATCTGAAGTCCAACCCACACTATTA i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73886822 119 - 130959383 cacatc---tgaagggagatgaaaccagaaaacccagttcagtcttgaaattctacgatcctGCT--AAAAAATGAATAAC------CCATGCTCCACCTCCCATATTTGAAGTCCAACCCACACTATTA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75447490 119 - 133195287 CACATC---TGAAGGGAGATGAAACCAGAAAACCCAGTTCAGTCTTGAAATTCTACGATCCTGCT--AAAAAATGAATAAC------CCATGCTCCACCTCCCATATTTGAAGTCCAACCCACACTATTA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73310835 119 - 125196307 CACATC---TGAAGGGAGATGAAACCAGAAAACCCAGTTCAGTCTTCAAATTCTACGATCCTGCT--AAAAAATGAATAAC------CCATGCTCCACCTCCCATATTTGAAGTCCAACCCACACTACTA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72143564 119 - 125710982 CACATC---TGAAGGGAGATGAAACCAGAAAACCCAGTTCAGTCTTGAATTTCTACGATCCTGCT--AAAAAATGAATAAC------CCAAGCTCCACCTCCCATATTTGAAGTCCAACCCACACTATTA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75603244 120 - 121768101 tgcatt---taaagggagatgaaaccagaaaaccgggttcagccttgaaattctatgattctGCT-AAAAAAATGAATAAC------CCATGCTCCACCTCCCATATCTGCAGTCCAACCCACACTATGA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27760038 130 + 88276631 cccatcactccaagggagaaggaaccagaaaatcccatgcagccctgaaattccttgatcccaccAAAAAAAATGAATAGCAACATTCAACGAAATACCTCCTGTATTTCATGTTCGGCCCACACGATTC i canFam3.chr4 C 0 C 0 e mm10.chr14 24203777 1447 + 124902244 I e nomLeu3.chr18 35092102 198 + 104879549 M a score=130570.000000 s hg38.chr10_KI270825v1_alt 110167 61 + 188315 GTTTTGCTGTACATTCAATATCTCTGCATTTTTGTCTCAACAAAAACAATAAGCATCACAC s ponAbe2.chr10 76150976 60 - 133410057 GTTTTGCTGTACATTCAATATCTCTGCATTTTTGTCTCAAC-AAAGCAATAAGCATCACAC i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73886941 60 - 130959383 GTTTTGCTGTACAATCAATATCTCTGCATTTTTGTCTCAAC-AAAACAATAAGCATCACAC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75447609 60 - 133195287 GTTTTGCTGTACAATCAATATCTCTGCATTTTTGTCTCAAC-AAAACAATAAGCATCACAC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73310954 60 - 125196307 GTTTTGCTGTACAATCAATATCTCTGCATTTTtgtctcaac-aaaacaataaGCAtcacac i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72143683 60 - 125710982 GTTTTGCTGTACAATCGATATCTCTGCATTTTTGTATCAAC-AAAACAATAAGCATCACAC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75603364 60 - 121768101 GCTTTGCTGTGCATTCAGTATCGTTGCATTTTTGTCTCAAC-AAAACAATGAGCATCACAC i calJac3.chr12 C 0 C 0 s canFam3.chr4 27760168 60 + 88276631 ATTGTGCTGTCCATTCAACATTTCTGCATTTTTGTCTCAAT-AAAACAATGAGTGCCACGA i canFam3.chr4 C 0 C 0 e mm10.chr14 24203777 1447 + 124902244 I e nomLeu3.chr18 35092102 198 + 104879549 M e panTro4.chr10 76488218 1408 + 133524379 M a score=-6209.000000 s hg38.chr10_KI270825v1_alt 110228 6 + 188315 ttt---ttt--- s rheMac3.chr9 73887001 9 - 130959383 CCCttcttt--- i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75447669 3 - 133195287 CCC--------- i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73311014 3 - 125196307 cct--------- i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72143743 3 - 125710982 CCt--------- i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75603424 6 - 121768101 ATT------TTT i calJac3.chr12 C 0 C 0 e canFam3.chr4 27760228 0 + 88276631 C e mm10.chr14 24203777 1447 + 124902244 I e ponAbe2.chr10 76151036 0 - 133410057 C e nomLeu3.chr18 35092102 198 + 104879549 M e panTro4.chr10 76488218 1408 + 133524379 M a score=33044.000000 s hg38.chr10_KI270825v1_alt 110234 26 + 188315 ttttttttttttttttttgagacaga s ponAbe2.chr10 76151036 26 - 133410057 ttttttttttttttttttgagacaga i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73887010 26 - 130959383 ttttttttttttttttttgagacgga i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75447672 26 - 133195287 ttttttttttttttttttgagacgga i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73311017 24 - 125196307 --ttttttttttttttttgagacgga i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72143746 25 - 125710982 -tttttttttttttttttgagacgga i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27760228 0 + 88276631 C e mm10.chr14 24203777 1447 + 124902244 I e nomLeu3.chr18 35092102 198 + 104879549 M e calJac3.chr12 75603430 0 - 121768101 C e panTro4.chr10 76488218 1408 + 133524379 M a score=515690.000000 s hg38.chr10_KI270825v1_alt 110260 284 + 188315 gtctt-gcactgtcgcctgggctgg-agtgcaatggcgcgatctcggctcactgcaacctccacctcctgggttcaagcgattctcctgccccagcctcctgagtagctgggattacaggtgcccaccaccatgcctgcctaattttttctatttttagtagagacagggttttgctatgttggccaggctggtcttgaactcctgacctcgggatccaccaggcctcagcctcccaaagtgctagga-ttacaggcatgagccaccatgtctggccTGCATCACAT s ponAbe2.chr10 76151062 286 - 133410057 gtcttggcactgtcgcctgggcgggaagtgcaatggcgcgatctcggctcactgcaacctctacctcctgggttcaagtgattctcctgccccagcctcctgagtagctgggattacaggcgcccaccaccatgcctgcctaattttttctatttttagtagagacggggttttgctatgttggccaggctggtcttgaactcctgacctcgggatccaccaggcctcagcctcccaaagtgctagga-ttacaggcatgagccaccgtgtctggccTGCATCACAC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35092300 281 + 104879549 gtctt-gctctgtcgcccaggctgg-agtgcaatggcgtgatctcggctcaccgcaacctccacctcttgggttcaagcaattcttctgccccagcctcctgagtagctgggattacaggcgcccaccac---gcctgcctaattttttctatttttagtagagacggggttttgctatgttggccaggtcggtcttgaactcctgacctcgggatccaccaggcctcagcctcccaaagtgctagga-ttacaggcatgagccaccatgtctggccTGCATCACAC i nomLeu3.chr18 M 198 C 0 s rheMac3.chr9 73887036 285 - 130959383 gtctt-gcattgtcgcctggtttgg-agtacaatggcgtgatctcggctcactgcaacctccacctcctgggttcaagcaattctcctgccccagcctcctgagtagctgggatcacaggtgcccaccaccacgcccgcctaatttcttctatttttagtagagatggggttttgctatgttggccagactggtcttgaactcctgatctcgggatccaccaggcctcagcctcccaaagtgctaggagttacaggcatgagccaccacatctggccTGCATCACAC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75447698 285 - 133195287 gtctt-gcattgtcgcccggtttgg-agtacaatggcgtgatctcggctcactgcaacctccacctcctgggttcaagcaattctcctgccccagcctcctgagtagctgggatcacaggtgcccaccaccacgcccgcctaatttcttctatttttagtagagatggggttttgctatgttggccagactggtctcgaactcctgatctcgggatccaccaggcctcagcctcccaaagtgctaggagttacaggcatgagccaccacatctggccTGCATCACAC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73311041 285 - 125196307 gtctt-gcattgtcgcccgggttgg-agtacaatggcgtgatctcggctcactgcaacctctgcctcctgggttcaagcaattctcctgccccagcctcctgagtagctgggattacaggtgcccaccaccacgcccgcctaatttcttctatttttagtagagatggggttttgctatgttggccagactggtctcgaactcctgatctcgggatccaccaggcctcagcctcccaaagtgctaggagttacaggcatgagccaccacatctggcctgcaTCACAC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72143771 285 - 125710982 gtctt-gcattgtcgcctgggttgg-agtacaatggcgtgatctcggctcactgcaacctccacctcctgggttcaagcaattctcctgccccagcctcctgagtagctgggattacaggcgcccaccaccacgcctgcctaatttcttctatttttagtagagatggggttttgttacgttggccaggctggtctccaactcctgatctcaggatccaccaggcctcagcctcccaaagtgctaggagttacaggcatgagccaccacatctggccTGCATCACAC i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27760228 0 + 88276631 C e mm10.chr14 24203777 1447 + 124902244 I e calJac3.chr12 75603430 0 - 121768101 C e panTro4.chr10 76488218 1408 + 133524379 M a score=13731.000000 s hg38.chr10_KI270825v1_alt 110544 8 + 188315 GTTTTTTT s ponAbe2.chr10 76151348 8 - 133410057 GTTTTTTT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35092581 8 + 104879549 GTTTTTTT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73887321 8 - 130959383 GTTTGTTT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75447983 8 - 133195287 GTTTGTTT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73311326 8 - 125196307 GTTTGTTT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72144056 8 - 125710982 GTTTGTTT i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27760228 8 + 88276631 ATTTCTCA i canFam3.chr4 C 0 C 0 e mm10.chr14 24203777 1447 + 124902244 I e calJac3.chr12 75603430 0 - 121768101 C e panTro4.chr10 76488218 1408 + 133524379 M a score=27791.000000 s hg38.chr10_KI270825v1_alt 110552 10 + 188315 AACCCATCTC s ponAbe2.chr10 76151356 10 - 133410057 AACCCATCTC i ponAbe2.chr10 C 0 M 666 s nomLeu3.chr18 35092589 10 + 104879549 AACCCATCTC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73887329 10 - 130959383 AACCCATCTC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75447991 10 - 133195287 AACCCATCTC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73311334 10 - 125196307 AACCCATCTC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72144064 10 - 125710982 AACCCATCTC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75603430 10 - 121768101 AACCCCTCTC i calJac3.chr12 C 0 C 0 s canFam3.chr4 27760236 9 + 88276631 -AATCCTCTC i canFam3.chr4 C 0 C 0 e mm10.chr14 24203777 1447 + 124902244 I e panTro4.chr10 76488218 1408 + 133524379 M a score=286912.000000 s hg38.chr10_KI270825v1_alt 110562 142 + 188315 TCTTTCTATATCATACACATTACATGTTGCTTCAATATCTGTGAAATAAAGTCAAATGCAATTCGGGCAATCCATTGATATCTTCAAAGAACAAGAACCCAACACAATGCCTATTTTCTAAACTCAACTACCATTTTTTAAA s nomLeu3.chr18 35092599 142 + 104879549 TCTTTCTACATCATACACATTAGGTGTTGCTTCAATATCTGTGAAATAAAGTCAAATGCAATTCGGGCAATCCATTGATATCTTCAAAGAACAAGAACCCAACACAATGTCTATTTTCTAAACTCAACTACCATTTTTTAAA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73887339 142 - 130959383 TCTTTCTGTATCACACACTTTACACATTGCTTCATTATCTGTGAAATAAAGTCAAATGCAATTTGGGCAATGCATTGATATCTTCAAAGAAAAAGAACCCAACACAATGTCTATTTTCTAAACTCAACTGCCATTTTTTAAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75448001 142 - 133195287 TCTTTCTGTATCACACACTTTACACATTGCTTCATTATCTGTGAAATAAAGTCAAATGCAATTTGGGCAATGCATTGATATCTTCAAAGAAAAAGAACCCAACACAATGTCTATTTTCTAAACTCAACTGCCATTTTTTAAA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73311344 142 - 125196307 TCTTTCTGTATCACACACTTTACACATTGCTTCATTATCTGTGAAATAAAGTCAAATGCAATTTGAGCAATGCATTGATATCTTCAAAGAAAAAGAACCCAACACAATGTCTATTTTCTAAACTcaactgccattttttaaa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72144074 142 - 125710982 TCTTTCTGTATCACACACTTTACACATTGCTTCATTATCTGTGAAATAAAGTCAAATGCAATTGGGGCAATGCATTGATATCTTCAAAGAAAAAGAACCCAACACAATGTCTATTTTCTAAACTCAACTGCCATTTTTTAAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75603440 142 - 121768101 TCTTTCTGTATCATACACATTTTGTGTGGCTTCAGTATCTGTGAAATAAAGTCAAATGCAATTCCGGCAATCCACTGATATCTTCAAAGAACAAGAACCCAACACGATGTCTATTTTCTAAACTCAACTGTCATTTTTTAAA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27760245 142 + 88276631 TCTTCCCATACCATAAACAGTAAGCATTGCATAAGGACCCGTGAAGTAAGGTCGGATACGATTCAGGCACTCCGTTGGTGTCTTCAAGGACAAACACGTCAACGCAACGCCGATTTCCTCAATTCAATGGACGGTTTCTTAA i canFam3.chr4 C 0 C 0 e mm10.chr14 24203777 1447 + 124902244 I e ponAbe2.chr10 76151366 666 - 133410057 M e panTro4.chr10 76488218 1408 + 133524379 M a score=2120294.000000 s hg38.chr10_KI270825v1_alt 110704 908 + 188315 TAGTATTTTTTCTTTATGGGGGCAAGGAAGGCTAGCC-ACTGACATGTTGGTGGATTGTTTTTG-GAAGACGTCTACTCAGGAAAGCAGGCACAAATAAATTTCCCCACTCTCACCTCCAGAAATCTCTATGCTCAACCCATCCCA-GCTTACGACACTGGCAGCCTGCGCTCCAG--ATGCCTCTGC-----TGGAACGCTCC-CCTCTTTCTTACTCTTGGCATCAGCAGTGCCCCTTCTTCCAGTAAA-----CTGCCCCTCCTCTT---------------------------------------------------------CAAATCG-TCTCTCTCCTCCCCTGTGGCAAGTTTCCACTGTTAATTAAGCTTGGCAGATGCCCTTCCCTCTCTCCG-CCCACCTACCTCCCTGGCTGGGGGAGTCCA----------CAGGCCAAGCGACACGTTCTGTTCCTCTTCCCTGTCCCTGCAGTCCTGACTGGCCTCTGGGGCCTAACC--AGGGCAGCGTGACATCTTTGTGTGCATCTCTGGGCATCACTCCCACCCC-CAACCCAGGGAGCTGGCAGGGCTCCTAGGAGCTGGTGG-----GGGGAGTGGTTAAAATTGGACAGGACCCAGTTTTTACAATGTTCCCAGAGCCTTGGACGTCATT---AA--GGGGGAAAAAAGGCCCAAAGACGACA-TTGTCTCGGTCATGCTTTGTCTCTGCGGTTATTGTTGTCCT-AAAGGCCTGTGTGGTCAGGACAGTCAGGAAAAGGCAAAAGAAG------CCACTGT--CC-CCCA---------------AAGTCACACGGTGTCCTTTCAAGGCCGGTTGCTTCCATGGGGCGGAGGGGCAGGTGTC-GGCGTCATCTACCTCTGGGGTTTCGCCATCAAATTTGGA-GTCA--------------------------AATTTGGTGCTC-------CTCATCT-TCTGCCATGGCCCAATCCAGGAGGAGACAATTT-CCCCAGGTTCTCCTGAAGGCACCTCCACCCAACCTG-CCCTGAAACCTAGGA s nomLeu3.chr18 35092741 934 + 104879549 TAGTATTTTTTCTTTATGGGGGCAAGGAAGGCTAGCT-GCTGGCATGTTGGTGGATTGTTTTTG-GAAGACGTCTACTCAGGAAAGCAGGCACAAATAAATTCCCCCACTCTCACCTCCAGAAATCTCTATGCTCAACCCATCCCA-GCTTACGACACTGGCAGCCTGCGCTCCGG--ATGCCTCTGC-----TGGAACGCTCC-CCTCTTTCTTACTGTTGGCATCGGCAGCGCCCCATCTTCCAGTAAA-----CTTTCCCTCCTCTT---------------------------------------------------------CAAATCG-TCTCTCTCCTCCCCTGTGGCAAGTTTCCACTGTTAATTAAGCTTGGCAGATGCCCTTCCCTCTCTCTG-CCCACCTACCTCCCTGGCTGGGGGAGTCCG----------CGGGCCAAGTGACACGTTCTGTTCCTCTTCCCTGTCCCTGCAGTCCTGACTGGCCTCTGGGGCCTAACC--AGGGCAGCGTGACATCTTTGCATGCATCTCTGGGCATCATTCCCACCCC-CATCCCAGGGAGCTGGCAGGGCTCCTAGGAGCTGGTGG-----GGGGAGTGGTTAAAATTGGACAGGACCCAGTTTTTACAATGTTCCCAGAGCCTTGGACGTCATT---AA--GGGGGAAAAAAGGCCCAAAGACGACA-TTGTCTCGGTCATGCTTTGTCTCTGCGGTTATTGTTGTCCT-AAAGGCCTGTGTGGTCAGGACTGTCAGGAAAAGGCAAAACAAG------CCACTGT--CC-CCCA---------------AAGCCACACAGTGTCCTTTCAAGGCCGGTTGCTTCCATGGGGCTGAGGGGCAGGTGTC-GGCATCATCTACCTCTGGGGTTTCGCCATCAAATTTGGA-GTCAACAGAAGTCCCATCTAGGCCGAGCACACTTTGGTGCTC-------CTCATCC-TCTGTCACGGCCCAATCCAGGAGGAGACAATTT-CCCCAGGTTCTCCTGAAGGCACCTCCACCCAACCTG-CCCTGAAACCTAGGA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73887481 934 - 130959383 CAGTAATTTTTCTTTATGGGGGCAAGGAAGGCTAACC-ACTGGCAGGTTGGTAGATTGTTTCTG-GAAGACGTCTACTCAGGAAAGCAGGCATAAATAAATTCCCCCACTCTCACCTCCAGAAATCTCTATGCTCAACCCATCCCG-GCTTACGACACTGGCAGCCTGCACTCCGG--ATGCCGCTGC-----TGGAATGCTCC-CCTCTTTCTTACTGTTGGCATCGGCAGCGCCCCATCTTCCAGTAAA-----CTACCCCTCCTCTT---------------------------------------------------------CAAATCG-TCTCTCTCCTCCCCCGTGGCGAGTTTCCACTGTTAATTAAGCTTGGCAGACACCCTTCCTTCTCTCCG-CCCACCTACCTCCCTGGCTAGGGGAGTCTG----------CGGGCCAAGCAACCCGTTCTGTTCCTCTTCCCTGTCCCTGCAGCCCTGACTGGCCTCTGGGGCCTAACC--AGGGCAGCGTGACATCTTTATGTGCATCTCTGGGCATCACTCCCACCCC-CATCCCAGGGAGCTGGCAGGGCTCCTAGGAGCTGGTGG-----GGGGAGTGGTTAAAATTGGACAGGACCCAGTTTTTACAATGTTCCCAGAGCCTTGGACGTCATT---AA--GGGGGAAAAAAGGCCCAAAGACGACA-TTGTCTCAGTCATGCTTTGTCTCTGCGGTTATTGTTGTCCT-AAAGTCCTGTGTGATCAGAACTGTCAGGAAAAGGCAAAAGAAG------CCACTAT--CC-TCCA---------------AAGTCACACAGTGTCCTTTCAAGGCCAGTTGCTTCCATGGGGCTGAGGGGCAGGTGTC-GGCGTCATCTACCTCTGGGGTTTCGCCATCAAATTTGGA-GTCAACAGGAGTCCCATCTAGGCCAAGCATACTTTGGTGCTC-------CTCATCT-TCTGCCACAGCCCAATCCAGGAGGAGACAATTT-CCCCAGGTTCTCCTGAAGGCACCTCCACCCAACCTG-CTCTGAAACCTAGGA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75448143 934 - 133195287 CAGTAATTTTTCTTTATGGGGGCAAGGAAGGCTAACC-ACTGGCAGGTTGGTAGATTGTTTCTG-GAAGACGTCTACTCAGGAAAGCAGGCATAAATAAATTCCCCCACTCTCACCTCCAGAAATCTCTATGCTCAACCCATCCCG-GCTTACAACACTGGCAGCCTGCACTCCGG--ATGCCGCTGC-----TGGAATGCTCC-CCTCTTTCTTACTGTTGGCATCGGCAGCGCCCCATCTTCCAGTAAA-----CTGCCCCTCCTCTT---------------------------------------------------------CAAATCG-TCTCTCTCCTCCCCCGTGGCGAGTTTCCACTGTTAATTAAGCTTGGCAGACACCCTTCCTTCTCTCCG-CCCACCTACCTCCCTGGCTAGGGGAGTCTG----------CGGGCCAAGCGACCCGTTCTGTTCCTCTTCCCTGTCCCTGCAGCCCTGACTGGCCTCTGGGGCCTAACC--AGGGCAGCGTGACATCTTTATGTGCATCTCTGGGCATCACTCCCACCCC-CATCCCAGGGAGCTGGCAGGGCTCCTAGGAGCTGGTGG-----GGGGAGTGGTTAAAATTGGACAGGACCCAGTTTTTACAATGTTCCCAGAGCCTTGGACGTCATT---AA--GGGGGAAAAAAGGCCCAAAGACGACA-TTGTCTCAGTCATGCTTTGTCTCTGCGGTTATTGTTGTCCT-AAAGTCCTGTGTGATCAGAACTGTCAGGAAAAGGCAAAAGAAG------CCACTAT--CC-TCCA---------------AAGTCACACAGTGTCCTTTCAAGGCCAGTTGCTTCCATGGGGCTGAGGGGCAGGTGTC-GGCGTCATCTACCTCTGGGGTTTCGCCATCAAATTTGGA-GTCAACAGGAGTCCCATCTAGGCCAAGCACACTTTGGTGCTC-------CTCATCT-TCTGCCACAGCCCAATCCAGGAGGAGACAATTT-CCCCAGGTTCTCCTGAAGGCACCTCCACCCAACCTG-CTCTGAAACCTAGGA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73311486 934 - 125196307 tagtaatttttctttatggGGGCAAGGAAGGCTAACC-ACTGGCAGGTTGGTAGATTGTTTCTG-GAAGACGTCTACTCAGGAAAGCAGGCATAAATAAACTCCCCCACTCTCACCTCCAGAAATCTCTATGCTCAACCCATCCCG-GCTTACGACACTGGCAGCCTGCACTCCGG--ATGCCGCTGC-----TGGAATGCTCC-CCTCTTTCTTACTGCTGGCATCGGCAGCGCCCCATCTTCCAGTAAA-----CTGCCCCTCCTCTT---------------------------------------------------------CAAATCG-TCTCTCTCCTCCCCCGTGGCGAGTTTCCACTGTTAATTAAGCTTGGCAGACACCCTTCCCTCTCTCCG-CCCACCTACCTCCCTGGCTGGGGGAGTCCG----------CGGGCCAAGCGATACGTTCTGTTCCTCTTCCCTGTCCCTGCAGCCCTGACTGGCCTCTGGGGCCTAACC--AGGGCAGCGTGACATCTTTATGTGCATCTCTGGGCAtcactcccacccc-catcccagggAGCTGGCAGGGCTCCTAGGACCTGGTGG-----GGGGAGTGGTTAAAATTGGACAGGACCCAGTTTTTACAATGTTCCCAGAGCCTTGGACGTcatt---aa--gggggaaaaaaggccCAAAGACGACA-TTGTCTCAGTCATGCTTTGTCTCTGCGGTTATTGTTGTCCT-AAAGGCCTGTGTGGTCAGAACTGtcaggaaaaggcaaaagaaG------CCACTAt--cc-ccca---------------aagtcacacagtgtcCTTTCAAGGCCAGTTGCTTCCATGGGGCTGAGGGGCAGGTGTC-GGCGTCATCTACCTCTGGGGTTTCGCCATCAAATTTGGA-GTCAACAGGAGTCCCATCTAGGCCAAGCACACTTTGGTGCTC-------CTCATCT-TCTGCCACAGCCCAATCCAGGAGGAGACAATTT-CCCCAGGTTCTCCTGAAGGCACCTCCACCCAACCTG-CTCTGAAACCTAGGA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72144216 932 - 125710982 TAGTAATTTTTCTTTATGGGGGCAAGGAAGGCTAACC-ACTGGCAGGTTGGTAGATTGTTTCTG-GAAGATGTCTACTCAGGAAAGCAGGCATAAATAAATTCCCCCACTCTCACCTCCAGAAATCTCTATGCTCAACCCATCCCG-GCTTATGACACTGGTAGCCTGCACTCCGG--ATGCTGCTGC-----TGGAATGCTCC-C--CTTTCTTACTGTTGGCATCGGCAGCGCCCCATCTTCCAGTAAA-----CTGCCCCTCCTCTT---------------------------------------------------------CAAATCG-TCTCTCTCCTCCCCCGTGGCGAGTTTCCACTGTTAATTAAGCTTGGCAGACACCCTTCCCTCTCTCCG-CCCACCTACCTCCCTGGCTGGGGGAGTCCG----------CGGGCCAAGCGACACGTTCTGTTCCTCTTCCCTGTCCCTGCAGCCCTGACTGGCCTCTGGGGCCTAACC--AGGGCAGCGTGACATCTTTATGTGCATCTCTGGGCATCACTCCCACCCC-CATCCCAGGGAGCTGGCAGGGCTCCTAGGAGCTGGTGG-----GGGGAGTGGTTAAAATTGGACAGGACCCAGTTTTTACAATGTTCCCAGAGCCTTGGACGTCATT---AA--GGGGGAAAAAAGGCCCAAAGACGACA-TTGTCTCAGTCATGCTTTGTCTCTGTGGTTATTGTTGTCCT-AAAGGCCTGTGTGGTCAGAACTGTCAGGAAAAGGCAAAAGAAG------CCACTAT--CC-CCCA---------------AAGTCACACAGTGTCCTTTCAAGGCCAGTTGCTTCCATGGGGCTGAGGGGCAGGTGTT-GGCGTCATCTACCTCTGGGGTTTCGCCATCAAATTTGGA-GTCAACGGGAGTCCCATCTAGGCCAAGCATACTTTGGTGCTC-------CTCATCT-TCTGCTACAGCCCAGTCCAGGAGGAGACAATTT-CCCCAGGTTCTCCTGAAGGCACCTCCACCCAACTTG-CTCTGAAACCTAGGA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75603582 849 - 121768101 TAGTATTTCTTCTTTATGGGGGCAAGGAAGGCTAGCCAACTGATACCTGAGCAGATTGTTTTTG-GAAGACACCTACTCAGGAAAGCAGGCACAAATAAAT--------TCTTACCTCCAGAAATCTCTATGCTCAACCCACCCCG-GCTGACGACACCGGCAGCCTGTGCTCCGG--ATGCCGCTGC-----AGGAACGCTCC-CCTCTTTCTTACTGTTGGCATCAGCGGCGCCCCATCTTCCAGTAAA-----CTGCCCCTCCTCTT---------------------------------------------------------CAGATTG-TCTCTCTCCTCCCCCGTGGCGAGTTTCCACTGTTAATTAAGCTTGGCAGACACCCTTCCCTCTCTCCG-ACCACCTCCCGCCCTGGCTGGGGGAGTCCA----------CAGGCCAACCGACACGTTCTGTTCCTCTTCCCTGTCCCTGCAGCCCTGACTGGGCTCTGGGGCCTGACC--AGGGCAGCGTGACATCTTTACGTGCATCTCTGGGCATCACCCCCACCCC-CTCCCCAGGAAGCTGGCAGGGATCCTAGGAGCTGGTGG-----GGGCAGTGGTTAAAATTGGACAAGACCCAGTTTTTACAATGTTCCCAGAGCCTTGGACGTCATT---AAAGGGGGGAAAAAAGGCCCAAAGACGACA-TTGTCTCGGTCACGCTTTGTCTCTGCGGTTATTGTTGTCCT-AAAGGCCTGTGTGGTCAGGACTGTCAGAAAAAGGCAAAAGAAG------CCACTGTTCCC-CCTA---------------ATGTCACATGGTGTCCTTTCAAGGCCAGTGGCTTCCATGGGGCTGAGGGACAGGTG---------------------------------------------------------------------------------------------GCATCC-TCTGCCACGACCCGATCCAGGAGGAGACAATTTCCCCCAGATACTCCTGAAGGAACCTCCACCCCACCTGCCCCTGAAACCTAGGA i calJac3.chr12 C 0 C 0 s mm10.chr14 24205224 991 + 124902244 TAGTTCCTTTTCTCTATGGGATC-AGGAAGGCTGGCC-AGCTGCTATATGGTGGATTGTTTTGGAAAAGACACCTACCTGGGAAAGCAGGCACAAATATATGCTCCCAGTCACACCCCCACAAA--TCTGTGCTCAACTCAACCCA-GCCT--GGCACT-TCTGCCTGTGCTCTGGAAATGCCACTGCCAGAATGGAAGGCTCA-CTTCTTTCTC-TTACTGGCATCAGCACTGTCCCATCTTCCAGTAAAGCAGcctgcccccacccccaccccatcaccacccccaccacacacacacacacacacacacacacacacacacacacacatcgctacctcctcctccCCATGGCGAATTTCCACTGTTAATTAAGCTTGGCAGATGCACTTTCTCCTCCCTG-CCTAGTGTCCTCCCTAGCTGGGGGAGTACATTTCACATTTCTG--CAACCAATACATTCTGTTCCTCTTTCCTGTCCCCAAAGTCCTGACTGGGGTATGAGGCCTTCCC-GGGGGCAGAGTGACATCTTTATTTGAATCTCTGGGCATCATCCTGGCCCCTCAGCACAGGCAGCTGGCAGGGTTC-------CTGGCCT-----GTGAATTGATTAAGACTGAACAAGGCCCGATTTTAACGATGTTCTTAGAGCCCTGGACGTCATT---AG--GGGG---AAAGGACCCAAAGAAGACA-CTGTCTGAGCAGTGTTTTGTCTTTGTAACTATTGTCTT--T-AAGGCCCTGTGTGCTCAGGACTGTTAGCAGAAGGCTGAAGAGGTAGCCCCCTCCCC--CT-CCCACACACACACACATACAAATTATACCGTATCTTTTCAAAGCTGATAGCTTC-------CTGAGGGGCAATTGTCTGGTGTCTTCTCCCTCTGGGGTTTT--------------------ACAAGAGTCCCACCTCAGCCCAGTATACTCAGATGTCCTGTCTAGCCTGTCTGTCTACAATGGCCATA---AGAATGTGACAATTT-CTCAAA--TCCCCAGAAGGGACTACTGC---AGGTA--ACTGAAGCCTAAGG i mm10.chr14 I 1447 I 88 s canFam3.chr4 27760387 852 + 88276631 ---TTATTTTTTTCTTTACGTTAATGGAAGGCTAGCCAGCCGGTATGTTGGTGGATTATTTTCG-AAAGATGCCTCCTTGGAAAAGGAGACACAACTAAACCCTCCCACTCACACCCCCAGA----TCCGAGCCGGGCCCCGATCGCGCTGGCGGCACCG------------CCGT-----TCCCTGC-----GGGAACGCCCTGCTTCTCCCTCACTACTGGCACCAGCAGAGCCCCATCTTCCAGTAAA-----GCACCCCTCCTCAT---------------------------------------------------------CAAGTCG-TCTCTCTCCTCCCCCATGGCCAGTTTCCACTGTTAATTAAACTTGGCAGACATCCTTGTCTCTCTCCGCCCCATCTCCCTCCCTGGCTGGGGGAGTCAA----------CTGGCCAACC---ACACACTGTTC----TTCCAGTCCCCGAAGTCCTGCCGAGGTTCTGGGGCATGACCTGGGGGCGGCGTGACATCTCTATCTGCATCTCTGGGCATC---TCCGCCCC-CG----AGTCGGCTGGCAGGGCTCCTAGGCGCTGGGGAATGGCAGGGAGGGATCAAAATTGGATGGGGCCCAGTTTTTACAACGTTCCCAGGGCCTCAGACGTCATTCAGAG--GAGGAGAAAAAGGCCCAAAGACGACGTTTGTCTTGGTCATGCTTTGTCTCTGCTACTATTGTTGTCTTAAAAAGCCTATGTGGTCAGGA-TGTCGGGAAAAGGCAAGAGGAG------TCACTCT--CCTCCCA---------------GAGTCACGCGGTGTCCTTTCAAAGCCGGTGGCTT--------CTGAAGGGCGGGTGTCGGGCGTCATCTACCTCTGGGGTTTCACAATCGAATCTGGAGGCCAACAGGAGT-------------------------------------CTCATCT-----CAAAGGCACCACTCAG--------------CCC------CCCATGAAGGCACCTGCACCCCATGTG-CCCTGAAGCCTA--- i canFam3.chr4 C 0 C 0 e ponAbe2.chr10 76151366 666 - 133410057 M e panTro4.chr10 76488218 1408 + 133524379 M a score=182560.000000 s hg38.chr10_KI270825v1_alt 111612 101 + 188315 TGGGCTGCTGTGGAAGGAGAAACAGTGTGGAGGGACATTCTCTACCTCACAGAGTGCCCAGGGCTAAGGGGGACTGTAGGATCAGC------CTCCTGAtgtgtgtg---- s nomLeu3.chr18 35093675 101 + 104879549 TGGGCTGCTGTGGAAGGAGAAACAGTGTGGAGGGACATTCTCTACCTCGCAGAGTGCCCAGGGCTAAGGGGGACTGTAGGATCAGC------CACCTGATGTGTGTG---- i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73888415 101 - 130959383 TGGGCTGCTGTGGAAGGATAAACAGTGTGGAGGGACATTCTCTACCTCGCAGAGTGCCCAAGGCTAAGGGGAACTGTAGGATCAGC------CTCCTGTTGTGTGTG---- i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75449077 101 - 133195287 TGGGCTGCTGTGGAAGGATAAACAGTGTGGAGGGACATTCTCTACCTCGCAGAGTGCCCAGGGCTAAGGGGAACTGTAGGATCAGC------CTCCTGTTGTGTGTG---- i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73312420 101 - 125196307 TGGGCTGCTGTGGAAGGAGAAACAGTGTGGAGGGACATTTTCTACCTCGCAGAGTGCCCAGGGCTAAGGGGAACTGGAGGATCAGC------Ctcctgttgtgtgtg---- i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72145148 101 - 125710982 TGGGCTGCTGTGGAAGGAGAAACAGTGTGGAGGGACATTCTCTACCTCACAGCGTGCCCAGGGCTAAGGGGAACTGTAGGATCAGC------CTCCTGTTGTGTGTG---- i chlSab2.chr9 C 0 I 26 s calJac3.chr12 75604431 101 - 121768101 TAGGCTGCTGAGGAAGGAGAAATGGTGTGGAGGGACATTCTCTACCTCGCAGAGTGGCCAGGGCTAACACGGACTATAGGATCAGC------CTCCTGATGTGTATa---- i calJac3.chr12 C 0 C 0 s canFam3.chr4 27761239 81 + 88276631 ------------------------------AGGCACATGCTCCACCTGGCGGAGAGGCCCAGACTGCCGAGGCCTGTAGAATCGGCGCGGCTCCCCTTCTGGCACTGCCCA i canFam3.chr4 C 0 C 0 e mm10.chr14 24206215 88 + 124902244 I e ponAbe2.chr10 76151366 666 - 133410057 M e panTro4.chr10 76488218 1408 + 133524379 M a score=4410.000000 s hg38.chr10_KI270825v1_alt 111713 19 + 188315 tgtgtgtgtgcacacacac---- s nomLeu3.chr18 35093776 12 + 104879549 TGCGCGCG-------ACAC---- i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73888516 17 - 130959383 --TGTGTGTACACACGCAC---- i rheMac3.chr9 C 0 I 14 s macFas5.chr9 75449178 17 - 133195287 --TGTGTGTACACATGCAC---- i macFas5.chr9 C 0 I 14 s papAnu2.chr9 73312521 17 - 125196307 --tgtgtgtacacacgcac---- i papAnu2.chr9 C 0 I 14 s calJac3.chr12 75604532 17 - 121768101 --cacacacacacacacac---- i calJac3.chr12 C 0 I 2 s canFam3.chr4 27761320 19 + 88276631 ----CGCCCCCATGGGCCCTCCC i canFam3.chr4 C 0 C 0 e mm10.chr14 24206215 88 + 124902244 I e ponAbe2.chr10 76151366 666 - 133410057 M e chlSab2.chr9 72145249 26 - 125710982 I e panTro4.chr10 76488218 1408 + 133524379 M a score=122293.000000 s hg38.chr10_KI270825v1_alt 111732 67 + 188315 a--------cacacacacacGAGAGGAGGGCAC--------------CAACCACAAACTTGTGCAAGCTACCAAGTACCATGCAGAGGT s nomLeu3.chr18 35093788 67 + 104879549 A--------CGCACACACACGAGAGGAGGGCAC--------------CAACCACAAACTCGTGCAAGCTACCAAGTACCGTGCAGAGGT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73888547 67 - 130959383 G--------CACACACACACGAGAGGAGGGCAC--------------CCACCACAAACTCATGCAAGCTACCAAGTACCGTGCAGAGGT i rheMac3.chr9 I 14 C 0 s macFas5.chr9 75449209 67 - 133195287 G--------CACACACACACGAGAGGAGGGCAC--------------CCACCACAAACTCATGCAAGCTACCAAGTACCGTGCAGAGGT i macFas5.chr9 I 14 C 0 s papAnu2.chr9 73312552 75 - 125196307 gcgcacacacacacacacacgagaggaAGGCAC--------------CCACCACAAACTCATGCAAGCTACCAAGTACCGTGCAGAGGT i papAnu2.chr9 I 14 C 0 s chlSab2.chr9 72145275 67 - 125710982 G--------CGCACACACACGAGAGGAGGGCAC--------------CGACCACAAACTCATGCAAGCTACCAAGTACCATGCAGAGGT i chlSab2.chr9 I 26 C 0 s calJac3.chr12 75604551 65 - 121768101 ----------acacacacacacGAGCAGGGCAC--------------CGACCACAAACTCATACAAACTACCAAGTACCGTGCAGAGGT i calJac3.chr12 I 2 C 0 s canFam3.chr4 27761339 72 + 88276631 --------ACACCCCCACAGGACAGCAGGGCGCTGCCACTCAGGGCGCTCCCACAAACTCAGGCAAGC---------CTGTGCACAGGT i canFam3.chr4 C 0 C 0 e mm10.chr14 24206215 88 + 124902244 I e ponAbe2.chr10 76151366 666 - 133410057 M e panTro4.chr10 76488218 1408 + 133524379 M a score=723681.000000 s hg38.chr10_KI270825v1_alt 111799 388 + 188315 GCTGATGAGATCCAGAGAAAGTTGGATGATGTGGAAACATTTCCAGAAAAGGGGAGCTTGAGGCCAAGTTTAGACGTGGACATGTGGGCCAGAGCGTGATATAAGGAGATTctttactatcaaaggaactacctgggcaac-----------gtaaactcttat-tcagcagatgagggtggggtttcagaatgcatttctcacaagcccccaggGCACATGCTCTACACACTGG-----------CCCAGAGCTGGA---------------------GTCCACAGGTGGGATGCACATGGAAGCTGCAGCCAAAACCCTGGGAGAGGTGGAAGGAAGCCACTGGGAGGAAGCCAGCCTGGTGACCCTCTGGGACTG-----------------------------------------------------GC-----CCACGGGCACTGTCTGTGTCCTTTCCAAGAGCCCAGCCCCTGATAATTCTGT s nomLeu3.chr18 35093855 377 + 104879549 GCTGATGAGACCCAGGGAAAGTTGGATG----------ATTTCCAGAAAAGGGGAGCTTGAGGCCAAGTTTAGACGTGGACATGT-GGCCAGAGCGTGATATAAGGAGATTctttactatcaaaggaattacctgggcaac-----------gtaagctcttat-tcagcagatgagggtggggtttcagaatgcatttctcacaagcccccaggGCACATGCTCTACACACTGG-----------CCCAGAGCTGGA---------------------GTCCGCAGGTGGGATGCACATGGAAGCTGCAGCCAAAACCCTGGGAGAGGTGGAAGGAAGCCATTGGGAGGAAGCCAGCCTGGTGACTCTCTGGGATTG-----------------------------------------------------GC-----CCACGGGCACTGTCTGTGTCCTTTCCAAGGGCTCAGCCCCTGCTAATTCTGT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73888614 388 - 130959383 GCTGATGAGACCCAGGGAGAGTTGGATGATGTGGAAACATTTCCAGAAAAGCGGAGCTTGAGGCCAAGTTTAGATGTGGACATGTGGACCAGAGCATGATATAAGGAGATTCTTTACTATCAAAGGAACTATCTGGGCAAC-----------GTAAGCGcttat-tcagcagacaagggtggggtttcagaacgcatttctcacaagcccctaggGCACATGCTCTATACACTGG-----------CCCAGAGCTGGA---------------------GTCCACAGGTGGGATGCACATGGAAGCTGCAGCCAAAACCCTGGGAGAGGTGGAAGAAAGCCACTGGGAGGAAGCCAGCCTGGTGACCCTCTGGGATTG-----------------------------------------------------GC-----CCACAGGCACTGTCTGTGTCCTTTCCAAGAGCCCGGCCCCTGCTAATTCTGT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75449276 388 - 133195287 GCTGATGAGACCCAGGGAGAGTTGGATGATGTGGAAACATTTCCAGAAAAGCGGAGCTTGAGGCCAAGTTTAGATGTGGACATGTGGACCAGAGCATGATATAAGGAGATTCTTTACTATCAAAGGAACTATCTGGGCAAC-----------GTAAGCGcttat-tcagcagacaagggtggggtttcagaacgcatttctcacaagcccctaggGCACATGCTCTACACACTGG-----------CCCAGAGCTGGA---------------------GTCCACAGGTGGGATGCACATGGAAGCTGCAGCCAAAACCCTGGGAGAGGTGGAAGAAAGCCACTGGGAGGAAGCCAGCCTGGTGACCCTCTGGGATTG-----------------------------------------------------GC-----CCACAGGCACTGTCTGTGTCCTTTCCAAGAGCCCGGCCCCTGCTAATTCTGT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73312627 388 - 125196307 GCTGATGAGACCCAGGGAGAGTCGGATGATGTGGAAACATTTCCAGAAAAGCGGAGCTTGAGGCCAAGTTTAGATGTGGACATGTGGACCAGAGCATGATATAAGGAGATTCTTTACTATCAAAGGAACTATCTGGGCAAC-----------GTAAGCGCTTCT-TCAGCAGACAAGGGTGGGGTTTCAGAACGCATTTCTCACAAGCCCCTAGGGCACATGCTCTACACACTGG-----------CCCAGAGCTGGA---------------------GTCCACAGGTGGGATGCACATGGAAGCTGCAGCCAAAACCCTGGGAGAGGTGGAAGAAAGCCACTGGGAGGAAGCCAGCCTGGTGACCCTCTGGGATTG-----------------------------------------------------GC-----CCACAGGCACTGTCTGTGTCCTTTCCAAGAGCCCGGCCCCTGCTAATTCTGT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72145342 388 - 125710982 GCTGATAAGACCCAGGGAGAGTTGGATGATGTGGAAACATTTCCAGAAAAGCGGAGCTTGAGGCCAAGTTTAGATGTGGACATGTGGACCAGAGCATGATATAAGGAGATTCTTTACTATCAAAGGAACCATCTGGGCAAT-----------GTAAGCGcttat-tcagcagacaagggtggggtttcagaacgcatttctcacaagcccctaggGCACATGCACTACACACTGG-----------CCCAGAGCTGGA---------------------GTCCACAGGTGGGATGCACATGGAAGCTGCAGCCAAAACCCTGGGAGAGGTGGAAGAAAGCCACTGGGAGGAAGCCAGCCTGGTGACCCTCTGGGATTG-----------------------------------------------------GC-----CCACAGGCACTGTCTGTGTCCTTTCCAAGAGCCCGGCCCCTGCTAATTCTGT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75604616 380 - 121768101 CCTGATGAGACCCAGAGAGAGT-GGATGAAGTGGGAACATTTCCAGAA-----------GAGGCCAAGTTTAGATGTGAACATATGGGCCAGAGCGTGATATCAGGAGATTC-TTGCTATCAAAGGAACTACCTGGGCaat-----------gcaagctcttat-ttggcaggtgagggtggggtttcagaatgcatttctcacaagcccccaagGCAAGTGCTCCACACACTGG-----------CCCAGAGCTGGA---------------------GTCAGCAGGTGAGATGCACACGGACGCTGCAGCTGAAACCCTGGGAGGGGCAGAAGGAAACCTCTGGGAGGAAGCCAGCCTGGTGACCCTCTGGGATTG-----------------------------------------------------GCCTGGGCCACAGGCACTGTCTGTGTCCTTTCCAAGAGCCCGGCCCCTGCTAATTCTAT i calJac3.chr12 C 0 C 0 s mm10.chr14 24206303 439 + 124902244 GCCTGTGAGATCCTAAGCAGACCGGA-----------CATTCCCACAGGAGACAAGCTTGTGGTCAGCTTCAGAT-----------GGCTTGACTGTCACCTATGTGGGTTGTCTGCCCTCTGAGGAATTGCTTGAGGACC----------------TGGTTAA-ATGGTAAATCAAGAGAGGACCTGTCACCACATTCCTAAGAAGGCCCAGGGACTTGTGGAC-ACAGACTAGTAGTGCAGGCACCAAGGACAGGAAGCACGGCTAGCAGGGAGACGAGCCAGAGTGGGGCTGTGGATGGAAGTTTCCACAGAAGCCCTGGGGGAGTAGGTA-----CCTCTGAGAGACAGCTGACCTAGAGACACGAGGTAACTgacccccccccgacccccccccgatcccccccccgaccccccccccccGCCGCTGC-----CCCCAAGCATAATCTACATCCTTTAGAAGAGCTCAG-GCCTGCTAATTCTGT i mm10.chr14 I 88 C 0 s canFam3.chr4 27761411 346 + 88276631 CCTCAGAGGACCCAG---AAGTCAGATGATCTGGAAACACGTCCAGGAAAGGAGAGC---AGAGCA----------TGGACGCGT-AACCAGAGAGGGACACGAGGGAGGCCTCTACTGGCACAGGGACTACCGGGGAGACCCGAGCAGAGGATGGGTTCCGATGTGGGCAGGCGAGG--GGGGCCTGGGACTCTGCCGCTCTAACGCCCCAG------------CACACAGAGG--------------AGACGTGGG---------------------G-CAGCAGGCAGG----GCCCGAAGGCTGCCG--GGAGCTGTGGGAGCCAGTGCAGGCGACGGCAGGG---------GCCCCGAGAGCCAC--AAACAG-----------------------------------------------------AC-----CCAC--GCAAGCTCTACATCCTTCCCAAGAGCCCAGCCCCTGCTAATTGCGT i canFam3.chr4 C 0 C 0 e ponAbe2.chr10 76151366 666 - 133410057 M e panTro4.chr10 76488218 1408 + 133524379 M a score=416727.000000 s hg38.chr10_KI270825v1_alt 112187 141 + 188315 TTACCCCGTGACTCAGTGCCACTGGGTCACGAAGACCACTTCAAAAGAAATTCCAGGAAAAACCACCCGAACAATAA-TGGAATGCCCCAGCCCTCCCAGGCCCCCTCCCATAGACCATGAGGCCCAAGAGAGATGGAAGCA s panTro4.chr10 76489626 141 + 133524379 TTACCCTGTGACTCAGTGCCATTGGGTCACGAAGAC-ACTTCAAAAGAAATTCCAGGAAAAATCACCCGAACAATAAATGGAATGCCCCAGCCCTCCCAGGCCCCCTCCCATAGACCATGGGGCCCAAGAGAGATGGAAGCA i panTro4.chr10 M 1408 C 0 s nomLeu3.chr18 35094232 141 + 104879549 TTACCCTGTGACTCAGTGCCATTGGGTCAAGAAGACCACTTCAAAAGAAATTCCAGTAAAAATCACCCGAACAATAA-TGGAATGCCCCAGCCCTCCCAGGCCACCTCCCATAGCTCATGGGGCCCAAAAGGGATGGAAGCA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73889002 141 - 130959383 TTACCCTGTGACTCAGCGCCATTGGGTCACAAAGACCACTTCAAAAGAACTTCCAGTAAAAATCACCCGAACAATAA-TGGAATGCGCCAGCCCTCCCAGGCCCCCTCCCACAGCCCATGGGGCCCAAGAGAGATGGAAGCG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75449664 141 - 133195287 TTACCCTGTGACTCAGCGCCATTGGGTCACAAAGACCACTTCAAAAGAACTTCCAGTAAAAATCACCCGAACAATAA-TGGAATGCGCCAGCCCTCCCAGGCCCCCTCCCACAGCCCATGGGGCCCAAGAGAGATGGAAGCG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73313015 141 - 125196307 TTACCCTGTGACTCAGCGCCATTGGGTCACAAAGACCACTTCAAAAGAACTTCCAGTAAAAATCACCCGAACAATAA-TGGAATGCGCCAGCCCTCCCAGGCCCCCTCCCACAGCCCATGGGGCCCAAGAGAGATGGAAGCG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72145730 141 - 125710982 TTACCCTGTGACTCATCACCATTGGGTCACAAAGACCACTTCAAAAGAACTTCCAGTAAAACTCACCCGAACAATAA-TGGAATGCGCCAGCCCTCCCAGGCCCCCTCCCACAGCCCATGGGGCCCAAGAGAGATGGAAGCG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75604996 141 - 121768101 TTACTCTGTGACTCAGCGCCATTGGTTCACGAAGACCACTTCAAAAGAACTTCCAGTAAAAATCACCCGAACAATAA-TGAAATGCCCCAGCCCTCCCAGATCCCCTCCCACAGCCCGTGGGGCCCAAGAGAGATGGAAGTG i calJac3.chr12 C 0 C 0 s mm10.chr14 24206742 121 + 124902244 TTACTGTGTGACTCAGTCCTCCTGGGTCACCAAG---ACTTCAAAAGAAGTTCCAGA-------ACTCTGGTGATAA-GGGAACAACCCAG-ACTCCCAGGCCCCTTTCAGCAGCCTGCAAGGCCAGGGAGTG--------- i mm10.chr14 C 0 C 0 s canFam3.chr4 27761757 114 + 88276631 TTACTCTGTGACTCAGCCCCAGTGGGTCACCGAGACCACTTCAAAAGAACTTCCAGT-AAAATCACCCGAGCAATAG-CGGAATGGCCCAGTCCTCCAAGGCCGCCTCCCGCAGCC-------------------------- i canFam3.chr4 C 0 C 0 e ponAbe2.chr10 76151366 666 - 133410057 M a score=2403361.000000 s hg38.chr10_KI270825v1_alt 112328 738 + 188315 CGCCCCCAACACAC-CCCTTCCATTCACCTGGAGCTTGTAAAGGCCCTGGTGACTCACGCTTCCTCTTCGTGAAGCTCACAGTGGCTGAAGGAACTTGTTCCAGCCTTGAACCAGCACACAGAGTTCTCCCTGTCCTCCAGAAGGGCCCAGGCAGAAAGGCAGAGAGCTGACGGCTCACGGTCACAGGGAGGCCAGCACCCCCTACCTCAATCCCCAGGGAAAGGAGAGGGAGACACCAAGCTGCTACTCTCTGGAGCTCTGGGGTCCCTGAAGACAGAGCAGGAAGTGCTGCCTGGGCCCCAGGAGGACAGTCACTTTCAGGGCACCTGCCACATCCTG------CCGCCCTCCTCCAGCTCACA-CTGAGGAACCACAGCCTGACGAACCACAGCAGAATGACCGAAGGTGCCCAATCGCTCCC-GGACTCACACGTGTCAGCCAGGTTTCCAACACGTGCCCCCCGCCTAGCATGGCACT--GGGCCAGGTTCGGGAGAAAGAATGGCAAGCCAGGGGCTCAAGAGCCTGGAGGTTACTCATCTGCTGTGAGTAGCCTTCAGAAGAAGGCCCT-TC---------TCTCTGAGCCA---------AACA----at-aatgattgcagcacagctggggccaaactgcttggagttaa-ct---cccagcccagccccttatgagctgtgtgctgttaggtaagtcactctgcctctctgtgcttccacatacttatcagtaaaatgggatgatagaagtgcttatctct-tagag s panTro4.chr10 76489767 738 + 133524379 CGCCCCCAACACAC-CCCTTCCATTCACCTGGAGCTTGTAAAGGCCCTGGTGACTCACGCTTCCTCTTCGTGAAGCTCACAGTGGCTGAAGGAACTTGTTCCAGCCTTGAACCAGCACACAGAGTTCTCCCTGTCCTCCAGAAGGGCCCAGGCAGAAAGGCAGAGAGCTGACGGCTCACGGTCACAGGGAGGCCAGCACCCCCTACCTCAATCCCCAGGGAAAGGAGAGGGAGACACCAAGCTGCTACTCTCTGGAGCTCTGGGGTCCCTGAAGACAGAGCAGGAAGTGCTGCCTGGGCCCCAGGAGGACAGTCACTTTCAGGGCACCTGCCACATCCTG------CCGCCCTCCTCCAGCTCACA-CTGAGGAACCACAGCCTGAGGAACCACAGCAGAATGACCGAAGGTGCCCAATCGCTCCC-GGACTCACACGTGTCAGCCAGGTTTCCAACACGTGCCCCCCACCTAGCATGGCACT--GGGCCAGGTTCGGGAGAAAGAATGGCAAGCCAGGGGCTCAAGAGCCTGGAGGTTACTCATCTGCTGTGAGTAGCCTTCAGAAGAAGGCCCT-TC---------TCTCTGAGCCA---------AACA----at-aatgattgcagcacagctggggccaaactgcttggagttaa-ct---cccagcccagccccttatgagctgtgtgctgttaggtaagtcactctgcctctctgtgcttccacatacttatcagcaaaatgggatgatagaagtgcttatctct-tagag i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76152032 720 - 133410057 CGCCCCCCACACAC-CGCTTCCATTCACCTGGAGCTTGTAAAGGCCCTGGTGACTCACGCTTCCTCTTTGTGAAGCCCACAGTGGCTGAAGGAACTTGTTCCAGCCTTGAACCAGCACACAGAGTTCTCCCTGTCCTCCAGAAGGGCCCAGGCAGAAAGGCAGAGAGCTGACAGCTCACGGTCACGGGGAGGCCAGCACCCCCTACCTCAATCCCCAGGGAAAGGAGAGGGAGAAACCAAGCTGCTACTCTTTGGAGGTCTGGGGTCCCTGAAGACAGAGCAGGAAGTGCTGCCTGGGCCCCAGGAGGACAGTCACTTTCAGGGCACCTGCCA----------------CCCTCCTCCAGCTCACA-CTGAGGAACCACAGCCT--------ACAGCAGAATGACTGAAGGTGCCCAATCGCTCCC-GGACTCGCACGTGTCAGCCAGGTTTCCAACACGTGCCCCCCGCCTAGCATGGCACT--GGGCCAGGTTCGAGAGAAAGAATGGCAAGCCAGGGGCTCAAGAGCCTGGAGGTTACTCATCTGCTGTCAGCAGCCTTCAGAAGAAGGCCCT-TC---------TCTCTGAGCCA---------AACA----Gt-aatgattgcaacacagctggggtcaacctgcctggagtcaa-ct---cccagcccagccccttatgagctgtgtgctgttagggaagtcactctgcctctctgtgcttccacatacttatcagtaaaatgggatgatagaagtgcttatctct-tagag i ponAbe2.chr10 M 666 C 0 s nomLeu3.chr18 35094373 726 + 104879549 CGCCCCCAACACAC-CCCTTCCATTCACCTGGAGCTTGTAAAGGCCCTGGTGACTCACGCTTCCTCTTCGTGAAGCCCGCAGTGGCTGAAGGAACTTGTTCCAGCCTTGAACCAG--CACAGAGTTCTCCCTGTCCTCCAGAAGAGCCCAGGCAGAAAGGCAGAGAGCTGACAGCTCACGGTCACGGGGAGGCCAGCACCCCCTACCTCAATCCCCAGGGAAAGGAGAGGGAGAAAGCAAGCTGCTACTCTCTGGAGCGCTGGGGTCCCTGAAGACAGAGCAGGAAGTGCTGCCTGGGCCCCAGGAGAACAGTCACTTTCAGGGCACCTGCCACATCCTG------CCACCCTCCTCCAGCTCACA-CTGAGGAACCACAGCCT--------ACAGCAGAATGACAGAAGGTGTCCAATCGCTCCC-AGACTCGCACGTGTCAGCCAGGTTTCCAACACGTGCCCCCCGCCTAGCATGGCACT--GGGCCAGGTTCGGGAGAAAGAATGGCAAGCCAGGGGCTCAAGAGCCTGGAGGTTACTCATCTGCTGTGAGTAGCCTTCAGAAGAAGGCCCT-TC---------TCTCTGAGCCA---------AACA----Gt-aatgattgcaacacagctggggccaacctgcctggagtcaa-ct---cccagcccagccccttattagctgtgtgctgttaaggaagtcactctgcctctctgtacttccac--acttatcagtaaaatgggatgatagaagtgcttatctct-tagag i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73889143 729 - 130959383 CACCCCCAACACAC-CCCTTCCATTCACCTGGAGCTTGTAAAGGCCCTGGTGATTCACGCTTCCTCTTCGTGAAGCCCACAGTGGCTGAAGGAACTTGTTCCAGCCTTGAACCAGCACACAGAGTTCTCCCTGTCCTCCAGAAGGGCCCAGGCAGAAAGGCAGAGAGCTGACAGCTCATGGTCATGGGGAGGCCAGCACCCCCTACCTCAATCCCCAGGGAAAGGGGAGGTAGAAAGCAAGCTGCTACTCTCGGGA-CTCTGGGGTCCCTGAAGACAGAGCAGGAAGTGCTGCCTGGGCCCCAGGAGGACAGTCACTTTCAGGGCACCTGCCACATCCTG------CCACCCTCCTCCAGTTCACA-CTGAGGAACCACAGCCT--------ACAGCAGAATGACCAAAGGTGCCCAATCGCTTCC-GGACTCGCACGTGTCAGCCAGGTTTCTAACACGTGCCCCCAGCCTAGCATGGCACT--GAGCCAGGTTCGGGAGAAAGAATGGCAAGCCAGGGGCTCAAGAGCCTGGAGGCTACTCATCTGCTGTGAGTAACCTTCAGAAGAAGGCCCT-TC---------TCTCTGAGCCA---------AACA----GT-AATGACTGCaacacagctggggccaacctgcctggagtcag-ct---cccagcccagccccttattagctgtgtgccattagggaagtcactctgcctctctgtgcttccacatacttatcagtaaaatgggatgatagaagtgcttatctct-tagag i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75449805 729 - 133195287 CACCCCCAACACAC-CCCTTCCATTCACCTGGAGCTTGTAAAGGCCCTGGTGACTCACGCTTCGTCTTCGTGAAGCCCACAGTGGCTGAAGGAACTTGTTCCAGCCTTGAACCAGCACACAGAGTTCTCCCTGTCCTCCAGAAGGGCCCAGGCAGAAAGGCAGAGAGCTGACAGCTCATGGTCATGGGGAGGCCAGCACCCCCTACCTCAATCCCCAGGGAAAGGGGAGGGAGAAAGCAAGCTGCTACTCTCTGGA-CTCTGGGGTCCCTGAAGACAGAGCAGGAAGTGCTGCCTGGGCCCCAGGAGGACAGTCACTTTCAGGGCACCTGCCACATCCTG------CCACCCTCCTCCAGTTCACA-CTGAGGAACCACAGCCT--------ACAGCAGAATGACCAAAGGTGCCCAATCGCTCCC-GGACTCGCACGTGTCAGCCAGGTTTCTAACACGTGCCCCCAGCCTAGCATGGCACT--GAGCCAGGTTCGGGAGAAAGAATGGCAAGCCAGGGGCTCAAGAGCCTGGAGGCTACTCATCTGCTGTGAGTAACCTTCAGAAGAAGGCCCT-TC---------TCTCTGAGCCA---------AACA----GT-AATGACTGCAACACAGctggggccaacctgcctggagtcag-ct---cccagcccagccccttattagctgtgtgccattagggaagtcactctgcctctctgtgcttccacatacttatcagtaaaatgggatgatagaagtgcttatctct-tagag i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73313156 729 - 125196307 CACCCCCAACACAC-CCCTTCCATTCACCTGGAACTTGTAAAGGCCCTGGTGACTCACGCTTCCTCTTCGTGAAGCCCACAGTGGCTGAAGGAACTTGTTCCAGCCTTGAACCAGCACACAGAGTTCTCCCTGTCCTCCAGAAGGGCCCAGGCAGAAAGGCAGAGAGCTGACAGCTCATGGTCACGGGGAGGCCAGCACCCCCTACCTCAATCcccagggaaaggggagggagaaagcAAGTTGCTACTCTCTGGA-CTCTGGGGTCCCTGAAGACAGATCAGGAAGTGCTGCCTGGGCCCCAGGAGGACAGTCACTTTCAGGGCACCTGCCACATCCTG------CCACCCTCCTCCAGTTCACA-CTGAGGAACCACAGCCT--------ACAGCAGAATGACCAAAGGTGCCCAATCGCTCCC-GGACTCGCACGTATCAGCCAGGTTTCTAACACGTGCCCCCAGCCTAGCATGGCACG--GAGCCAGGTTCGGGAGAAAGAATGGCAAGCCAGGGGCTCAAGAGCCTGGAGGCTACTCATCTGCTGTGAGTAACCTTCAGAAGAAGACCCT-TC---------TCTCTGAGCCA---------AACA----GT-AATGACTGCAACACAGCTGGGGCCAACCTGCCTGGAGTCag-ct---cccagcccagccccttaTTAGCTGTGTGCCATTAGGGAAGTCACTCTGCCTCTCTGTGCTTCCACATacttatcagtaaaatgggatGATAGAAGTGCTTATCTCT-TAGAG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72145871 725 - 125710982 CACCCCCAACACAC-CCCTTCCATTCACCTGGAGCTTGTAAAGGCCCTGGTGACTCACGCTTCCTCTTCGTGAAGCCCACAGTGGCTGAAGGAACTTGTTCCAGCCTTGAACCAGCACACAGAGTTCTCCCTGTCCTCCAGAAGGGCCCAGGCAGAAAGGCAGAGAGCTGACAGCTCACGGTCACAGGGAGGCCAGCACCCCCTACCTCAATCCCCAGGGAAAGGGGAGGGAGAAAGC----TGCTACTCTCTGGA-CTCTGGGGTCCCTGAAGACAGAGCAGGAAGTGCTGCCTGGGCCCCAGGAGGACAGTCACTTTCAGGGCACCTGCCACATCCTG------CCACCCTCCTCCAGTTCACA-CTGAGGAACCACAGCCT--------ACAGCAGAATGACCAAAGGTGCCCAGTCGCTCCC-GGACTCGCATGTGTCAGCCAGGTTTCTAACACGTGCCCCCAGCCTAGCATGGCACT--GGGCCAGGTTCGGGAGAAAGAATGGCAAGCCAGGGGCTCAAGAGCCTGGAGGCTACTCATCTGCTGTGAGTAACCTTCAGAAGAAGGCCCT-TC---------TCTCTGAGCCA---------AACA----GT-AATGACTGCAACACAGctggggccaacctgcctggagtcag-ct---cccagcccagacccttattagctgtgtgccattagggaagtcactctgcctctctgtgcttccacatacttatcagtaaaatgggatgatagaagtgcttatctct-tagag i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75605137 729 - 121768101 CACCCCCAACACAC-CCCTTCCATTCACCTGGAGCTTGTAAAGGCTCTGGTGACTCACACTTCCTCTTTGTGAAACCCACAATGGCTGAAGGAACTTGTTCTAGCCTTGAATCAGCACACAGAGTTCTCCCTGTCCTCCAGAAGGGCCCAGGCAGAAAGGCAGAGAGCTGACAGCTCGGGGTCAC-GGGAGGCCAGCACCCCCTACCTCAATCCCCGGGGAAAGGGGAGGGAGAAGGCAAGCTGCTACTCCCTGGGGCTCTGGGGTCCCTGGAAACAGAGCAGGAAATACTGCCTGGGCCCCAGGACGACAGTCACTTCCAGGGCACCTGGCCCACCTTG------CCACCCTCCGCTAGCTCACA-CTCAGAAACCACAGCCT--------ACAGAAGAATGACCAAAGGTGCCCAGTCGCTCCC-GAACCCACATGTGTCAGCCAAGTTCCCAACACGTGCCCTGCACCCAGCATGGCACT--GGGTCAGGTTCAGGAGAAAGAATGGCAAGCCAGGGGCTCAGGAACCTCGAGGCTACTCACCTGGTATGAGCAGCCTTCAGAAGAAGGCCCT-TC---------TCAATGAGCTA---------AACA----Gt-aatgattacagcacagttagggccaacctgcctggagtcag-ct---cccagcccagccccttatcagctgtgtgtccttagggaagtcactctgcctctctgtgcttccacatacttgtcagtaaaatgggatgacagaagtacttatgtct-tagag i calJac3.chr12 C 0 C 0 s mm10.chr14 24206863 533 + 124902244 ---TCTCATCACCCACCCCTCCAGTCACCTGGAA-TTGTAAAGGGCTGGGTGACTCACGCTTGCACCATG-GAAACTCAAAACAGC---------------------TGAACTAGCATGCCGAGG--TCCGTGGTCACCAGGCATCCTGAGACAG---------------------CACGGCCGCAGACAGGCTAGCCCCTACCA-CTCAACCACCGGCAAGTGGG-------------------------------CTCCAAGGCCC---AAGACAG----------------CAGGTATCAGCAGCA-------------GATGCCTGCCCCACCCTG------CTCTCCTCCTCCCACTCACACCTGAGGAACTACAACCC--------ACA----------------CGTCTGATGACTCCC-AGACTCACACGTGTC-------TCTTCAG---------------------GGCACT--GGGTCAGGT--GAGAGGAA------CCAGGCTGGGACGC-----TCCAGAGGCTGCACACCTGCTCGGAG--GCTT----AAGAGAGTCCT-TCCCATCTGAGCCTCTAGGCCA---------AAGGGGATGG-AGTGACTGGAGCTCC-CTGGGGCTTATCTCCCCAAATCCAC-CCGTACCTCGCCCATACCCTCA------------------------------GGCTCTCTGTGTGTCTATATGTTTACT---------GTATCGTGGGGATGCTTTCCTCGAGAAAG i mm10.chr14 C 0 C 0 s canFam3.chr4 27761871 625 + 88276631 TGCGCTTGGCTCCC-C--------TCACCTGGAGCTCGTACGGGCCCCGCTGGCTCACGCTTCCTCCCAGGGA----CACTAGGATCCAGGGCACCTCTGCCAGCCTAGGGCCTGCCCACGGGCCTCCTCCC-------------------------------AGCGCTGCCCGC-----------------CGCGCCCACCCCGCTCCGCTCACCGGGCACCTGCGAAGG------CCGGCGGCTGTGCCCGGGGGCTCTGG----------------TCGGGAGGCGCT--------------------GTCACCACTAAGCTACCTGCCCCGCCCTGGAGCCCACCCCCCCCCCCAGCTCACCCCTGAGGAACCACGGCCG--------GGCACAG-ATGGCTGACAGCACCCCAGCGCTCCCTTGACCTGCATGTGCCCATCAGGCTCCTGACACGAG-CCTGAGCCCCACGAGGCCCCCGGGGCCAGGCCTGGGAAAA-----GGCCAGCCAGGGGCTCAA-------GAGGCTCCCCAGCTGCT--GGGCAACCT-CGGCAGTAGTCCCTGCC---------CCTCTGAGCCAGGGTCGCTCAGCT----GTCAAGGGAGGCGGTGACGACGAGGACAGCCACATGGGCGCCAGCCT---Gcccactctgccccttg---gccaggtgct-tcaggtgagtcactcggcccctccttgcctccacatacct----gtgtaatgggctcggaggagtgcttacctaa-tagag i canFam3.chr4 C 0 I 16 a score=99428.000000 s hg38.chr10_KI270825v1_alt 113066 28 + 188315 ctgtttgaggataaactgatttaatgca s panTro4.chr10 76490505 28 + 133524379 ctgtttgaggataaactgatttaatgca i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76152752 28 - 133410057 ctgtttgaggataaactgacttaatgca i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35095099 28 + 104879549 ctgtttgaggataaactgatttaatgca i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73889872 28 - 130959383 ctgtttgaggataaactgatttaatgca i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75450534 28 - 133195287 ctgtttgaggataaactgatttaatgca i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73313885 28 - 125196307 CTGTTTGAGGATAAACTGATTTAATGCA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72146596 28 - 125710982 ctgtttgaggataaactgatttaatgca i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75605866 28 - 121768101 ctgtttgaggataaactgatttaaagca i calJac3.chr12 C 0 C 0 s mm10.chr14 24207396 28 + 124902244 TCCTGCGAGGATCAACTGAATTGCTCCA i mm10.chr14 C 0 I 579 e canFam3.chr4 27762496 16 + 88276631 I a score=1042465.000000 s hg38.chr10_KI270825v1_alt 113094 343 + 188315 ggttgagtatccct---------------aatccaaaaatctccaaaatct---gaaactttttgagcaccaacatgacaccac-agcagaaaattccacacctgacctcatgtgatgggccagtcaaaatgcaggcgcaggatacagtttattctgcttcctcaaaggaaaaacaaaattatcttcaggctatgtgtatataaggtgtatatgaaatga-gaatacgtttcacatctagacttgggtcctatccccaagatatctcattatgtatatgcaaatattccagaatctagagaaatccaaaccccaaaaacacttctggttccaaggatttcagataagggatattctgcctgtt s panTro4.chr10 76490533 343 + 133524379 ggttgagtatccct---------------aatccaaaaatctccaaaatct---gaaactttttgagcaccaacatgacaccac-agcagaaaattccacacctgacctcatgtgatgggccagtcaaaacgcaggcgcaggatacagtttattctgcttcctcaaaggaaaaacaaaattatcttcaggctatgtgtatataaggtgtatatgaaatgc-gaatacgtttcacatctagacttgggtcctatccccaagatatctcattatgtatatgcaaatattccagaatctagagaaatccaaaccccaaaaacacttctggttccaaggatttcagataagggatattctgcctgtt i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76152780 358 - 133410057 ggttgagtatccctaatccaaaaatctgaaatccaaaaatctccaaaatct---gaaactttttgagcaccaacacgacaccac-agcagaaaattccacacctgacctcatgtgatgagccggtcaaaacgcaggtgcaggatacagtttattctgcttcctcaaaggaaaaacaaaattatcttcaggctatgtgtatataaggtgtatatgaaatgc-gaatacatttcacatctagacttgggtcccatccccaagatatctcattatgtatatgcaaatattccagaatctggagaaattcaaaccccaaaaacacttctggttccaaggatttcagataagggatattctgcctgtt i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35095127 358 + 104879549 ggttgagtatccctaatccaaaaatctgaaacccaaaaatctccaaaatct---gaaactttttgagcaccaacatgacaccac-agcagaaaattccacacctgacctcatgtgatgggccagtcaaaacacaggcacaggatacagtttattctgcttcctcaaaggaaaaacaaaattatcttcaggctatgtgtatataaggtatatatgaaacac-gaatacatttcacatctagacttgggtcccatccccaagatatctcattatgtatatgcaaatattccagaatctggagaaatccaaaccccaaaaacacttctggttccaaggatttcagataagggatattctgcctgtc i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73889900 357 - 130959383 ggctgagtatccctaatccaaaaatctgaaatccaaaaatctccaaaatct---gaaactttttgagtactaacatgacaccac-tgcagaaaattccacacctgacctcatgtgatgggccagtcaaaatgcaggcacacgatacagtttattctgcttcctcaaaggaaaaacaaaattatcttcacgctatgtgtatataaggtgtatatgaaacgc-gaatacatttcccatctagacttgggtcccactcccaagatatctcattatgtatatgaaaatattccaaaatctggagaaatccaagacccaaaaacacttctggttccaaggatttcagat-agggatattctgcctgtt i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75450562 358 - 133195287 ggctgagtatccctaatccaaaaatctgaaatccaaaaatctccaaaatct---gaaactttttgagtactaacatgacaccac-tgcagaaaattccacacctgacctcatgtgatgggccagtcaaaatgcaggcacacgatacagtttattctgcttcctcaaaggaaaaacaaaattatcttcacgctatgtgtatataaggtgtatatgaaacgc-gaatacatttcccatctagacttgggtcccactcccaagatatctcattatgtatatgaaaatattccaaaatctggagaaatccaagacccaaaaacacttctggttccaaggatttcagataagggatattctgcctgtt i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73313913 358 - 125196307 Ggctgagtatccctaatccaaaaatctgaaatccaaaaatctccaaaatct---gaaactttttgagtactAACATGACACCAC-TGcagaaaattccacacctgacctcatgtgatgggcCAGTCAAAATGCAGGCACACAATACAGTTTATTCTGCTtcctcaaaggaaaaacaaaattatcttcaCGCTATGTgtatataaggtatatatgaaacgC-GAATACATTTCCCACCTAGACTTGGGTCCCActcccaagatatctcattatgtatatgaaaatattccaaaatctggagAAATCCAAGACCCAaaaacacttctggttccaaggatttcagataagggatattcTGCCTGTT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72146624 358 - 125710982 ggctgagtatccctaatccaaaaatctgaaatccaaaaatctccaaaatct---gaaactttttgagtactaacatgacaccac-tgcagaaaattccacagctaacctcatgtgatgggccagtcaaaatgcaggcacaggatacagtttattctgcttcctcaaaggaaaaacaaaattatcttcacgctatgtgtatataaggtgtatatgaaacac-gaatacatttcccatctagacttgggtcccactcccaagatatctcattatgtatatgaaaatattccaaaatctggagaaatccaagacccaaaaacacttctggttccaaggatttcagataagggatattctgcctgtt i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75605894 343 - 121768101 ggttgagtatccct---------------aacccaaaaatctccaaaatctccaaaaactttttgagcactgacatgacaccacaagcagaaaattccacacctgacctcatgggatgggtcagtcaacatgcaggcacaggatac-----atgctgcttcctcaaggaaaaaacaaagttatcctcaggctatgtgtatataaggtgcgtatgaaacactaaatacatttcacatctagatttacgtcacgtccccaagataattcattatgtatatgcaaatattccaaaatctggagaaatccgaaatgcaacaacacttctggttccaaggatttcagataagggatattccgcctgta i calJac3.chr12 C 0 C 0 e canFam3.chr4 27762496 16 + 88276631 I e mm10.chr14 24207424 579 + 124902244 I a score=3430528.000000 s hg38.chr10_KI270825v1_alt 113437 1086 + 188315 tgtgaaaagtgactgaaacagtacctcgcatagccggtactc-taagtgttagctggtgttATTATGGTCAGTCCAGACCTGCAGAGGGCCCTTCCAACTCTGCTGTT--CAATTCCTCAATTACCTACATGGAAAGCTGTACTAGAGTGACAA-GTCACACAATCTA--CAAGCAAACTGCTGCACTGTATATGGCACTCTC-------------------------------AAGAAAAATaatagcagctaataggtactaagcactactaagtactgggactgtgctaagcac-tttgcatgtattgcctccattaatttccataacaacccaaaggttgtcattattagtcccatttcacagaggaagaaactaagagttag-aaaaatt----aatttgctgaaggtcgtg--ctagggctactaagagcacaaacaggatacaaacccaggcagtctaccccagcgcctgtgctctcaaatcctacacacaatactgCTGCCCGGCTCCACAG--GGAAGAGCAGTCAGAGAGGACTTCATGGAGGCAGGGGCCTGGAGCTGGCCCTGAAAGGTGGTGGCCTTGGATAAGCACATGAGAAGCCCGATCAGCTTGCAGGAGACAACAGGCGGAACCCATTTCTCTGGAAGGGTAAGAAGTCTCAGAGCAGGGCTGGCTTGGGCCAAGGCCCCCCAGCCTCTATT-------CCCTGGGAATGGGCTCACCTCCTCCCTGCCCACCTCCCCACACCGAGACAACACTCAATAGGCATT-CTGAGCTGAGCCACTTCC-ACCCAAG---------------TGGGAAGAAAG-----AGAAGGAGCTGTGGCTTCATGGCCC------------------CCATTCC------ATACCCATGCCTGTGCTGCCTGCAGAGGGGAGTCGCAGTGTGTGGGCAAGCCTGCACTCAAGAGCCACTCAATTCTGTGAACTGCAGAGATGAGGAAGGAGGTGAC--CGTGAAAGTTGCGGAGTGCTATCACCTTTGGCAGAGCCCACCTTCTCTGTTTTAAAGACCTCCTGGGATGCTGGGGGGACAGAGGGCTCATATCCTACTATTAGGCTACTAGGAAGCCTGCTTGCAGAACCATGCTCAGTTCTCAGGAGGGAAGAAAGGTGGCAGGGaaaaaaa--aaagaaaag s panTro4.chr10 76490876 1068 + 133524379 tgtgaaaagtgactgaaacagtacctcgcatagccagtactc-taagtgttagctggtgttATTATGGTCAGTCCAGACCTGCAGAGGGCCCTTCCAACTCTGCTGTT--CAATTCCTCAATTACCTACATGGAAAGCTGTACTAGAGTGACAA-GTCACACAATCCA--CAAGCAAACTGCTGCACTGTATATGGCACTCTC-------------------------------AAGAAAAATaatagcagctaataggtactaagcactactaagtgctgggactgtgctaagcac-tttgcatgtattgcctccattaatttccataacaacccaaaggttgtcattattagtcccatttcacagaggaagaaactaagagttag-aaaaatt----aatttgctgaaggtcgtg--ctagggctactaagagcaccaacaggatacaaacccaggcagtctaccacagcgcctgtgctctcaaatcctacacacaatactgCTGCCCGGCTCCACAG--GGAAGAGCAGTCAGAGAGGACTTCATGGAGGCAGGGGCCTGGAGCTGGCCCTGAAAGGTGGTGGCCTTGGATAAGCACATGAGAAGCCCGATCAGCTTGCAGGAGACAACAGGCGGAACCCATTTCTCTGGAAGGGTAAGAAGTCTCAGAGCAGGGCTGGCTTGGGC------------------ATT-------CCCTGGGAATGGGCTCACCTCCTCTCTGCCCACCTCCCCACACCGAGACAACACTCAATAGGCATG-CTGAGCTGAGCCACTTCC-ACCCAAG---------------TGGGAAGAAAG-----AGAAGGAGCTGTGGCTTCATGGCCC------------------CCATTCC------ATACCCATGCCTGTGCTGGCTGCAGAGGGGAGTCGCAGTGTGTGGGCAAGCCTGCACTCAAGAGCCACTCAATTCTGTGAACTGCAGAGATGAGGAAGGAGGTGAC--CGTGAAAGTTGCGGAGTGCTATCACCTTTGGCAGAGCCCACCTTCTCTGTTTTAAAGACCTCCTGGGATGCTGGGGGGACAGAGGGCTCATATCCTACTATTAGGCTACTAGGAAGCCTGCTTGCAGAACCATGCTCAGTTCTCAGAAGGGAAGATAGGTGGCAGGGAAAAAAA--AAAGAAAAG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76153138 1088 - 133410057 tgtgaaaagtgattgaaacagtaccttgcatagccggtactc-taagtgttagctgctgttATTATGGTCAGTCCAGACCTGCAGAGGGCCCTTCCAACTCTGCTGTT--CAATTCCTCAATTACCTATATGGAAAGCTGTACTCGAATGACAA-GTCACACAATCCA--CAAGCAAACTGCTGCACTGTATATGGCACTCTC-------------------------------AAGAAAaataatagcagctaataggtactaagcactactaagtgctgggactgtgctaagcac-tttacatgtattgcctccattaatttccataacaacccagaggttgtcattattagtcccatttcacagaggaagaaactaagagttag-aaaaatt----aatttgcttaagttcatg--ctagggctactaaaagtgcaaacaggatacaaacccaggcagtctaccccagcgcctgtgctctcaaatcctacacacaatactgcTGCCCGGCTCCACAG--GGAAGAGCAGTCAGAGAGGACTTCACGGAGGCAGGGGCCTGCAGCTGGCCTTGGAAGGTGGTGGCCTTGGATAAGCACATGAGAAGCCCGATCAGCTTGCAGGAGACAATAGGCAGAACCCATTTCTCTGGAAGGGTAAGCAGTCTCAGAGCAGGGCTGGCTTGGGCCAAGGCCTCCCAGCCTCTATT-------CCCTGGGAATGGGCTCATCTCCTCCCTGCCCACCTCCCCACACCGAGACAACACTCAACAGGCATT-CTGAGCTGAGCCACTTCC-ACCCAAG---------------TGGGAAGAAAG-----AGAAGGAGCTGTGGCTTCATGGCCC------------------CCATTCC------ATACCCACGCCTGTGCTGGCTGCAGAGGGGAGTCGCAGGGTATGGGCAAGCCTGCACTCAAGAGCCACTCAATTCTGTGAACTGCAGAGATGAGGAAGGAGATGACAATGTGAAAGTTGTGGAATGCTATCACCTTTGGCAGAGCCCACCTTCTCTGTTTTAAAGACCTCCTGGGATGCTGGGGGGACAGAGGGCTCAGATCCTACTATCGGGCTACTAGGAAGCCTGCTTACAGAACCATGCTCAGTTCTCAGGAGGGAAGAAAGGTGGCAGGGAAAAAAA--AAAGAAAAG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35095485 1088 + 104879549 tgtgaaaagtgattgaaacactacctcgcatagccggtactc-taagtgttagctgctgttATTATGGTCAGTCCAGACCTGCAGAGGGCCCTTCCAACTCTGCTGTT--CAGTTCCTCAATTACCTACATGGAAAGCTGTAATCAAATGACAA-GTCACACAATCCA--CAAGCAAACTGCTGCACTGTATAAGGCACTCTC-------------------------------AAGAAAaataatagcagctaataggtactaagcactactaagtgctgggactatgctaagcac-tttgcatgtattgcctccattaatttccataacaacccagaggttgtcattattagtcccatttcacagaggaaaaaactaagagttag-aaaaatt----aatttgctgaaggttgtg--ctagggctactaagagtgcaaacaggatagaaacccaggcagtctaccctagcacctgtgctctcaaatcctacacacagtactgcTGCCTGGCTCCACAG--GGAAGAGCAGTCAGAGAGGACTTCATGGATGCAGGGGCCTGGAGCTGGCCCTGGAAGGTGGTGGCCTTGGATAAGCACATGAGAAGCCCGATCAGCTTGCAGGAGACAATAGGCAGAACCCATTTCTCTGGAAGGGTAAGAAGTCTCAGAGCAGGGCTGGCTTGGGCCAAGGCCTCCCAGCCTCTATT-------CCCTGGGAATGGGCTCATCTCCTCCCTGCCCACCTCCCCACACCGAGACAACACTCAACAGGCATT-CTGAGCTGAGCCACTTCC-ACCCAAG---------------TGGGAAGAA-------AGAAGGAGCTGTGGCTTCATGGCCC------------------CCATCCC------ATACTCATGCCTGTGCTGGCTGCAGAGGGGAGTCGCAGGGTGTGGGCAAGCCTGCACTCAAAAGCCACTCAATTCTGTGAACTGCAGAGATGAGGAAGGAGGTGACAGCGTGAAAGTTGCGGAGTGCTATCACCTTTGGCAGAGCCCACCTTCTCTGTTTTAAAGACCTCCTGGGATGCTGGGGGGACAGAGGGCTCAGATCCTACTATGGGGCTACTAGGAAGCCTGCTTGCAGAACCATGCTCAGTTCTCaggaaggaagaaaggtggcagggaaaaaaaagaaaaaaaga i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73890257 1089 - 130959383 tgtgaaaagtgattgaaacagcacctcaaatagctggtactcttaagtgttcgctgctgttATTATGGTCAGTCCAGACCTGCAGAGGGCCCTTCCAATTCTGCTGTT--CAATTCCTCAATTACCTACATAGAAAGCTGTACTAGAGTGACAA-GTCACACAATCTA--CAAGCAAACCGCTGCACTGTATATGGCACTCTC-------------------------------AAGAAAaataatagcagctaataggtactaagcactactaagtgctgtgactgtgctaagtac-tttgcatgtattgcctccattaatttccataacaacccagaggttgtc---attagtgccatttcacagaggaagaaactaagagttag-aaaaatt----aatttgcttaaggtcgtg--ctagggctactaagagtgcaaacaggatacaaacccaggcagtctaccccagcgcctgtgctctcaaatcctacacacaatactgcTGCCTGGCTCCACAG--GGAAGAGCAGTCAGAGAGGACTTCATGGAGGCAGGGGCCTGGAGCTGGCCCTGGAAGGTGGTGGCCTTGGATAAGCACATGAGAAGCCAGATTGGCTTGCAGGAGACAAGAGGCAGAACCCATTTCTCTGGAAGGGTAAGAAGTCTCAGAGCAGGGCTGGCTTGGGCCAAGGCTTCCCAGCCTCTATT-------CCCTGGGAATGGGCTCATCTCCTCCCTGCCTACCTCCCCACACCAAGACAGCACTCAACAGGCATT-CTGAGCTGAGCCACTTCC-ACCCAAG---------------TGGGAGGAAAGAG--AAGAAGGAGCTGTGGCTTCATAGACC------------------CCATTCC------ATACCCATGCCTGTGCTGGCTGCAGAGGGAAGTCGCAGGGTATGGGCAAGCCTGCACTTGAGAGCCACTCAATTCTGTGAACTGCAGAGATGAGGAAGGAGGTGACAGCGTGAAAGTTGCGGAGTGCTGTCACCTTTGGCAGAGACCACCCTCTCTGTTTTAAAGACCTCCTGGGATGCTGGGGAAACAGAGGGCTCAGATCCTACTAGTGGGCTACTAGGAAGCCCGCTTACGGAACCATGCTCAGTTCTCAGGTGGGAAGAAAGGTGGCAGaaaaacaaa--aaacaaaaa i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75450920 1089 - 133195287 tgtgaaaagtgattgaaacagcacctcaaatagctggtactcttaagtgttcgctgctgttATTATGGTCAGTCCAGACCTGCAGAGGGCCCTTCCAATTCTGCTGTT--CAATTCCTCAATTACCTACATAGAAAGCTGTACTAGAGTGACAA-GTCACACAATCTA--CAAGCAAACCGCTGCACTGTATATGGCACTCTC-------------------------------AAGAAAaataatagcagctaataggtactaagcactactaagtgctgtgactgtgctaagtac-tttgcatgtattgcctccattaatttccataacaacccagaggttgtc---attagtgccatttcacagaggaagaaactaagagttag-aaaaatt----aatttgcttaaggtcgtg--ctagggctactaagagtgcaaacaggatacaaacccaggcagtctaccccagcgcctgtgctctcaaatcctacacacaatactgcTGCCTGGCTCCACAG--GGAAGAGCAGTCAGAGAGGACTTCATGGAGGCAGGGGCCTGGAGCTGGCCCTGGAAGGTGGTGGCCTTGGATAAGCACATGAGAAGCCAGATTGGCTTGCAGGAGACAAGAGGCAGAACCCATTTCTCTGGAAGGGTAAGAAGTCTCAGAGCAGGGCTGGCTTGGGCCAAGGCTTCCCAGCCTCTATT-------CCCTGGGAATGGGCTCATCTCCTCCCTGCCTACCTCCCCACACCAAGACAGCACTCAACAGGCATT-CTGAGCTGAGCCACTTCC-ACCCAAG---------------TGGGAAGAAAGAG--AAGAAGGAGCTGTGGCTTCATAGACC------------------CCATTCC------ATACCCATGCCTGTGCTGGCTGCAGAGGGAAGTCGCAGGGTATGGGCAAGCCTGCACTTGAGAGCCACTCAATTCTGTGAACTGCAGAGATGAGGAAGGAGGTGACAGCGTGAAAGTTGCGGAGTGCTGTCACCTTTGGCAGAGCCCACCCTCTCTGTTTTAAAGACCTCCTGGGATGCTGGGGAAACAGAGGGCTCAGATCCTACTAGTGGGCTACTAGGAAGCCCGCTTACGGAACCATGCTCAGTTCTCAGGTGGGAAGAAAGGTGGCAGaaaaacaaa--aaacaaaaa i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73314271 1062 - 125196307 TGTGAAAAGTGATTGAAACAGCACCTCAAATAGCTGGTACTCTTAAGTGTTAGCTGCTGTTATTATGGTCAGTCCAGACCTGCAGAGGGCCCTTCCAATTCTGCTGTT--CAATTCCTCAATTACCTACATAGAAAGCTGTACTAGAGTGACAA-GTCACACAATCCA--CAAGCAAACCGCTGCACTGTATATGGcactctc------------------------------aaagaaaaataatagcagcTAATAGGTACTAAGCACTACTAAGTGCTGtgactgtgctaagtacttttgCATGTATTGCCTCCATTAATTTCCATAACAACCCAGAGGTTGTC---ATtagtcccatttcacagaggaagaaactaagagttagaaaaaatt----aatttgcttaAGGTCGTG--CTACGGCTACTAAGAGTGCAAACAGGATACAAACGCAGGCAGTCTACCCCAGCGCCTGTGCTCTCAAATCCTACACACAATACTGCTGCCTGGCTCCACAG--GGAAGAGCAGTCAGAGAGGACTTCATGGAGGCAGGGGCCTGGAGCTGGCCCTGGAAGGTGGTGGCCTTGGATAAGCACATGAGAAGCCAGATTGGCTTGCAGGAGACAAGAGGCAGAACCCATTTCTCTGGAAGGGTAAGAAGTCTCAGAGCAGGGCTGGCTTGGGCCAAGGCTTCCCAGCCTCTATT-------CCCTGGGAATGGGCTCATCTCCTCCCTGCCTACCTCCCCACACCGAGACAGCACTCAACAGGCATT-CTGAGCTGAGCCACTTCC-ACCCAag---------------tgggaagaaagag--aagaaggagctGTGGCTTCATAGACC------------------CCATTCC------ATACCCATGCCTGTGCTGGCTGCAGAGGGAAGTTGCAGGGTGTGGGCAAGC------------------------------CTGCAGAGATGAGGAAGGAGGTGACAGCGTGAAAGTTGCGGAGTGCTATCACCTTTGGCAGAGCCCACCTTCTCTGTTTTAAAGACTTCCTGGGATGCTGGGGGAACAGAGGGCTCAGATCCTACTAGTGGGCTACTAGGAAGCCCGCTTACAGAACCATGCTCAGTTCTCAGGTGGGAAGAAAGgtggcagaaaaacaaa--aaacaaaaa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72146982 1086 - 125710982 tgtgaaaagtgattaaaacagcacctcaaatagctggtactcttaagtgttagctgctgttATTATGGGCAGTCCAGACCTGCAGAGGGCCCTTCCAATTCTGCTGTT--CAATTCCTCAATCACCTACATAGAAAGCTGTACTAGAGTGACAA-GTCGCACAATCCA--CAAGCAAACCGCCGCACTGTATATGGCACTCTC-------------------------------AAGAAAaataatagcagctaataggtactaagcactactaagtgctgtgactgtgctaagtac-tttgcgtgtattgcctccattaatttccataacaacccagaggatgtc---attagtcccatttcacagaggaagaaactaagagttag-aaaaatt----aatttgcttaaggtcgtg--ctagggctactaagagtgcaaacagcatacaaacccaggcagtctaccccagcgcctgtgctctcaaatcctgcacacaatactgcTGTCTGGCTCCACAG--GGAAGAGCAGTCAGAGAGGACTTCATGGAGGCAGGGGCCTGGAGCTGGCCCTGGAAGGTGGTGGCCTTGGATAAGCACATGAGAAGCCAGATTGGCTCGCAGGAGACAAGAGGCAGAACCCATTTCTCTGGAAGGGTAAGAAGTCTCAGAGCAGGGCTAGCTTGGGCCAAGGCTTCCCAGCCTCTATT-------CCCTGGGAATGGGCTCATCTCCTCCCTGCCTACCTCCCCACACCGAGACAGCACTCAACAGGCATT-CTGAGCTGAGCCACTTGC-ACCCAAG---------------TGGGAAGAAAG-----AGAAGGAGCTGTGGCTTCATAGACC------------------CCATTCC------ATACCCATGCCTGTGCTGGCTGCAGAGGGAAGTCGCAGGGTGTGGGCAAGCCTGCACTCGAGAGCCATTCAATTCTGTGAACTGCAGAGATGAGGAAGGAGGTGACAGCGTGAAAGTTGCGGAGTGCTATCACCTTTGGCAGAGCCCACCTTCTCTGTTTTAAAGACCTCCTGGGATGCTGGGGGAACAGAGGGCTCAGACCCTACTAGTGGGCTACTAGGAAGCCCGCTTACAGAACCATGCCCAGTTCTCAGGTGGGAAGAAAGGTGGCAGaaaaacaaa--aaacaaaaa i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75606237 1008 - 121768101 tgtgaaaagtgattcaaacagcac-----------------------------ctgCTGTTATCATGGTCAGACCAGACCTGCAGAGGGCCCTTGCAACTCTGCTCTT--CAATTCTTCAACTACATACATAGAAAGCTGTACTAGAGTGACAG-GTCACACAGTCCA--CAAGCAAACTGCTGCACTGTAT--GGCACT----------------------------------AAGAAAAATaatagcagctaataggtactaagcactattaagtgctaggactgtgctaagcac-tttgcatgtagtgcctccattaatttccatgacaacccagaggttgtc---attaggcccattt--cagaggaataaactaagagttag-aaaaatt----aatctgcttaaggtcatg--ctagagctactaagaacgcaaacaggatacagacccaggcagtctagcccagcacctgtgcgctc-aatcctacatacaatactgCTGCCTGGCTCCACAG--GGAAGAGCAGTCAGAGAAGACTTCATGGAGGAAGGGGCCTGGAGCTGGCCCTGGAAGGTGGTGGCCTTGGATAAGTACAGGAGAAGCCAGATTGGCTTGCAGGAGACAATAGGCAGAA-CTATTTCTCTGGGAGGGTGAGAACTCTCAGAGCAGGGCCAGCT---------------------CTATT-------CCCTGGGAGTGGGCTCATCCCCTCCCTGACCAGCTCTCCACACCAAGACAACACTCAACAGGCATT-CTGAGCTGACCCACTTCT-ATCCAAG---------------TGGGAAGAAAGAG--GAGGAGGAGCTGTGGCTTCATGGTCC------------------CCATTCC------ATACCCATGCCTGTGATGGCT-------------GCAGGGTGTGGGCCAGCCCTCACTTGAAAGCCACTCAATTCTGTGAACTGCAGAGACAAGGAAGGAGGTGACAGAGTGAAAGTTGCAGAGTGCTATCACCTTTTGCAG-GCTCACCTTCCCTGATCTAAAGCCCTCCCGGGATGCTGGGGGAAC--AGGGCTCAGATCCTACTGGCCGGCTCCTAGGAAGCTGGCTTGCAGAACCATTCTCAGTAATCAGGTGAGAAGTAAGATGACAGGGGAAAAAA--AAA------ i calJac3.chr12 C 0 C 0 s canFam3.chr4 27762512 1086 + 88276631 tgtgaacagggcctgaaacagcacct-gcacagccagtgctc-caagtgctagctGCTGCCACTATTGGCAAACCGGA------------CCTTCCAACACTGCCATTCCCAATCCTCTGACTAGCGAAACTGACAGCTGCACTACAGTGACAAGGCCAAGCGGTACAGGCTGACAGGCTGCCAGAC--TACAGGGAACTCACtaataataataataataataataataataacaacaataacaataGCAGCTCATAGACactgagcactactaagtgtcaag-ttgtgctaagcac-ttggcatgcattgtctcagtaaactcctaaaacaaccctgaggctgtc---aacaggcccattttacagaggagaaaactaagggttag-gataattaagaaacttgcttaaggtcttgatatagaaccagtaagggaat-gacaagatacaagcc----cagtttaacccaaaggctgcactcttgatccctaggcccaacactgctgcccggctctgAAGAAGGAAGGACAGTCAGGGGAGGCTTCATGGAGGAAGCAGCCTGGCACTGGCCCTGGAGGATAGTGACCTT-GACAAGCACCTGAGAAGCCAACTCAGCCTGGAAGAAAC-ACAGGCAGAGCCTGTCCCCCTGTGCAAGTGGAAAGTCTCAGAACAGAGCCAGCCCTGCCCGGGGCCCTCCAGCCTGGATCCCTCCCACCCCCAGAAGGGGCTTGATCCCTCTCTGCCCTCCTTCCCCCACCAAGAGGACACTCATCTGGCATTGTTGAGATGG--CACTGCTGAGCCAGGGATGGGGGCTAAACCTGGGAAAAAAGAGAAAGAGAGGAGCCACAGCTCCATGACCCTGACATACACTGCTGCTTCCAGCCCGCCCCAACACCCATGCCCATGCCCAGGGCAGAGGCAGGTCCCAGGGCTCAGGGA--CCCTCATGCAAGAGGCAC-CGACTCTGGGAGTTGGAGACATGAGGAAGGAGGCAAGAGTGTGAGGAGTGCAGTGTGCTGT--------GCAGAGA--ACCTCCCCGTTTCTGAGGACCACAGGAGCTGCTGG-----CAGGGTACCC---CCCCACCCCCCCGCTGCTGAGAC-CCCTCTTGCAAAATCACA--------------------------------------------------- i canFam3.chr4 I 16 C 0 e mm10.chr14 24207424 579 + 124902244 I a score=178060.000000 s hg38.chr10_KI270825v1_alt 114523 59 + 188315 a-aaaaaCTACACTCAGGGCAGCCCCAGCCCCTCCCTAGGGGCTCGGCCTCCTACCCTTT s panTro4.chr10 76491944 59 + 133524379 A-AAAAACTACATTCAGGGCATCCCTAGCCCCTCCCTAGGGGCTCATCCTCCTACCCTTT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76154226 59 - 133410057 A-AAAAACTACATTCAGGGCAGCCCTAGCCCCTCCCTAGGGGCTCAGCCTCCTACCCTTT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35096573 59 + 104879549 a-aaaaaCTACACTCAGTGCAGCCCTAGCCCCTCCCTAGGGGCTCAGCCTCCTACCCTTT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73891346 59 - 130959383 acaaaaaCTACATTCAGGGCAGCCCTAG-CCCTCCCTAGGGGCTCAGCCTCCTACCCTTT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75452009 59 - 133195287 acaaaaaCTACATTCAGGGCAGCCCTAG-CCCTCCCTAGGGGCTCAGCCTCCTACCCTTT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73315333 59 - 125196307 acaaaaactacattcaGGGCAGCCCTAG-CCCTCCCTAGGGGCCCAGCCTCCTACCCTTT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72148068 59 - 125710982 acaaaaaCTATATTCAGGGCAGCCCTAG-CCCTCCCTAGGGGCTCAGCCTCCTACCCTTT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75607245 58 - 121768101 --AAGAACTACATTCAGGGTAGCCCTAGGCCCTCCCTAGGGACTCAGCCTCCTATCCCTT i calJac3.chr12 C 0 I 184 s mm10.chr14 24208003 31 + 124902244 -AAAGCACTGTACTGAGGGCAGCCCCTGTTCC---------------------------- i mm10.chr14 I 579 C 0 s canFam3.chr4 27763598 48 + 88276631 -----------AGTCAGTGCAGTCACGC-CCCTCCCCAGGGCCTCAGCTGCCTTCCCTTT i canFam3.chr4 C 0 C 0 a score=613553.000000 s hg38.chr10_KI270825v1_alt 114582 177 + 188315 AAAAGCACGGCCCAAGGCTACAGACACTGAAACCCAAACTGGGAAGCGGACAAGGCCCA-GTATTTCAGGG-AGGTATAGGTTGACCATGGCCCT-GGAATGGAGCAACCA-CAGACACTGGCATGTCA-----TCAAGGAAGTCCTG-----CTGATGC--GCCTTATATG-CC-ACCCGAGGGTGGGAAAAT------------------------------------C s panTro4.chr10 76492003 178 + 133524379 AAAAGCATGGCCCAAGGCTACAGACACTGAAACCCAAACTGGGAAGCGGACAAGGCCCA-ATATTTCAGGG-AGGTATAGGGTGACCATGGCCCTTGGAATGGAGCAACCA-CGGACACTGGCTTGTCA-----TCAAGGAAGTCCTG-----CTCATGC--ACCTTATATG-CC-ACCCGAGGGTGGGAAAAT------------------------------------C i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76154285 177 - 133410057 AAAAGCATGGCCCAAGGCTGCAGACACTGAAACCCAAACTTGGAAGCAGACAAGTCCCA-GTATTTCAGGG-AGGTATAGGGTGAACATGGCCCT-GGAATGGAGCAACCA-CAGACACTGGCATGTCA-----TCAAGGAAGTCCTG-----CTCATGC--GCCTTATATG-CC-ACCCGAGGGTGGGAAAAT------------------------------------C i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35096632 168 + 104879549 AAAAGCATGGCCCAAGGCTGCAGACACTGAAACCCAAACTTGGACGCGGACAAGGCCCA-GTATTTCAGGG-AGGTATAGGGTGACCATGGCCCT-GGAATGGAGCA----------ACTGGCATGTCA-----TCAAGGAAGTCCTG-----CTCATGC--GCCTTATATG-CC-ACCCGAGGGTGGGAAAAT------------------------------------C i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73891405 177 - 130959383 AAAAGCATGGCCCAAGGCTGCAGACACTGAAACCCAAACTTGGAAGCAGACAAGGCCCA-GTATTTCAGGG-AGGTATAGGGTGACCATGGCCCT-GGAATGGAGCAGCCA-CAGACACTGGCATGTCA-----TCAAGGAAGTCCTG-----CTCATGT--GCCTTATACG-CC-ACCCAAGGGTGGGAAAAC------------------------------------C i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75452068 177 - 133195287 AAAAGCATGGCCCAAGGCTGCAGACACTGAAACCCAAACTTGGAAGCAGACAAGGCCCA-GTATTTCAGGG-AGGTATAGGGTGACCATGGCCCT-GGAATGGAGCAGCCA-CAGACACTGGCATGTCA-----TCAAGGAAGTCCTG-----CTCATGT--GCCTTATACG-CC-ACCCAAGGGTGGGAAAAC------------------------------------C i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73315392 177 - 125196307 AAAAGCATGGCCCAAGGCTGCAGACACTGAAACCCAAACTTGGAAGCAGACAAGGCCCA-GTATTTCAGGG-AGGTATAGGGTGACCATGGCCCT-GGAATGGAGCAGCCA-CAGACACTGGCATGTCA-----TCAAGGAAGTCCTG-----CTCATGT--GTCTTATACG-CC-ACCCAAGGGTGGGAAAAC------------------------------------C i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72148127 177 - 125710982 AAAAGCATGGTCCAAGGCTGCAGACACTGAAACCCAAACTTGGAAGCAGACAAGGCCCA-GTATTTCAGGG-AGGTATAGGGTGACCACGGCCCT-GGAATGGAGCAGCCA-CAGACACTGGCATGTCA-----TCAAGGAAGTCTTG-----CTCATGT--GTCTTATACG-CC-ACCCAAGGGTGGGAAAAC------------------------------------C i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75607487 180 - 121768101 AAAAGCATGGCCCAAGGCTGCAGACACTGAAACCCAAACTTGGAAGCTGACATGCCCCA-CTATTTCAGGGAAGGTATAGGGTGACCATGGCCCC-AGAATGGAGCAACCA-CAGACACTGGCATGTCA-----ACAAGGAAGTCCTG-----CTCACACATGCCTTATATG-CC-ACCTCAGGGTGGGAAAAT------------------------------------C i calJac3.chr12 I 184 C 0 s mm10.chr14 24208034 206 + 124902244 --------------AAGTTGTACATACTGAGACCCAACACTGTAGGCGGACAAAGCTCAGGCATTTCAGCA-AACAAGAGAG-----GTGGCCAC-AGGATGCAGTACACA-CAGACTAAGGCATGTCAGTCAGTCAAGGGAGCCCTACCTGCCCCACAC--AGCTTAGGGGTTC-CTCTGAGGGTGCAAAGATGCTGACCACCTCTGTGCACAGCAGCTGGTGATTCAGA i mm10.chr14 C 0 C 0 s canFam3.chr4 27763646 180 + 88276631 AAAAATATGGCCCAAGGCTGTGGACACTGAGACCCAAACTAGGAGGCTGTCAAGCCCCA-GCCTGTCAGAG-AGGTATGGGGTGACCACGGTCCC-GGAACGGAGCAGCAGCCAGAGCCCGGCATAGCA----GTGAAGGAAGTCCTG-----CTTCCTG--CACCCGCATG-CCTGCCTCAGGACAGGGGAAT------------------------------------C i canFam3.chr4 C 0 I 561 a score=508649.000000 s hg38.chr10_KI270825v1_alt 114759 192 + 188315 CTACTCTT---------------------------------------------------------------------------------------------------------GGTTTGTAAGTTAAGATTTAATATTTGTTTTCC-TCAACTGAGATAATGCTATAGTATTTTCCACCAAGTTTTGGAACAAGCAGCATCACTGCGCTAA-------AAAAAAAAAAAATCA---TAATGATGTGGAT-TCCCCCTATTTCTGGTCGTTATAAGAACTGCTCAcctatctttaaaaggtaa-aggtggc s panTro4.chr10 76492181 192 + 133524379 CTACTCTT---------------------------------------------------------------------------------------------------------GGTTTGTAAGTTAAGATTTAATATTTGTTTTCC-TCAACTGAGATAATGCTATAGTATTCTCCACCAAGTTTTGGAACAAGCAGCATCACTGCGCTAA-------AAAAAAAAAAAATCA---TAATGATGTGGAT-TCAGCCTATTTCTGGTCGTTATAAGAACTGCTCACCTATCTTTAAAAGGTAA-AGGTggc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76154462 189 - 133410057 CCGCTCTT---------------------------------------------------------------------------------------------------------GGTTTGTAAGTTAAGATTTAATATTTGTTTTCC-TCAGCTGAGATAATGCTATAGTATTCTCCACCAAGTTTTGGAACAAGCAGCATCACTGTGCT----------AAAAAAAAAAATCA---TAATGATGTGGAT-TCCCCCTATTTCTGGTCGTTATAAGAACTGCTTACCTATCTTTAAAAGGTAA-AGGTggc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35096800 187 + 104879549 CTGCTCTT---------------------------------------------------------------------------------------------------------TGTTTGTAAGTTAAGACGTAATATTTGTTTTCC-TCATCTGAGATAATGCTATAGTATTCTCCACCAAGTTTTGGAACAAGCAGCATCACTGTGCT------------AAAAAAAAATCA---TAATGATGTGGAT-TCCCCCTATTTCTGGTCATTATAAGAACTGCTCACCTATCTTTAAAAGGTAA-AGGTggc i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73891582 193 - 130959383 CCACTCTC---------------------------------------------------------------------------------------------------------GGTTTGTAAGTTAAGATTTAATATTTGTTTTCC-TCAACTGAGATAATGCTACAGTATTCTCCACCAAGTTTTAGAACAAGCAGCATCACTGTACTAC-------AAAAAAAAAAAATTAGAGTAATGATGTGGAT-TC--CCTGTTTCTGGTCATTATAAGAACTGCTCATCCATCTTTAAAAGGTAA-AGGTggc i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75452245 193 - 133195287 CCACTCTC---------------------------------------------------------------------------------------------------------GGTTTGTAAGTTAAGATTTAATATTTGTTTTCC-TCAACTGAGATAAAGCTACAGTATTCTCCACCAAGTTTTAGAACAAGCAGCATCACTGTACTAC-------AAAAAAAAAAAATTAGAGTAATGATGTGGAT-TC--CCCGTTTCTGGTCATTATAAGAACTGCTCATccatctttaaaaggtaa-aggtggc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73315569 193 - 125196307 CCACTCTC---------------------------------------------------------------------------------------------------------GGTTTGTAAGTTaagatttaatatttgttttcc-tcaACTGAGATAATGCTACAGTATTCTCCACCAAGTTTTAGAACAAGCAGCATCACtgtgctac-------aaaaaaaaaaaattagagtaatGATGTGGAT-TC--CCCGTTTCTGGTCATTGTAAGAACTGCTCATCCATCTTTAAAAGGTAA-Aggtggc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72148304 194 - 125710982 CCACTCTC---------------------------------------------------------------------------------------------------------GGTTTGTAAGTTAAGATTTAATATTTGTTTTCC-TCAACTGAGATAATGCTACAGTATTCTCCACCAAGTTTTAGAACAAGCAGCATCACTGTGCTAC------AAAAAAAAAAAAATTAGAGTAATGATGTGGAT-TC--CCCGTTTCTGGTCATTATAAGAACTGCTCATccatctttaaaaggtaa-aggtggc i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75607667 303 - 121768101 CCGTTCTCCTGACATGCAGAGGGTGGGTGGTAACTCGGGCAACACCCGCTGTTACCTTTGAGTTAAGCAAGATTCACCCTTCATGTGCACAGCCCGCTC----CAAAGTACCAGGTTTGTAAGTTAAGATTTGATATTCGTTTTCC-CCAGCTGAGATATTGCTCTAGTATCCTCCACCAAGTTTTAGAGCAAGCAACATCATTATGGTTAAAAGAAAAAAAAAAAAAAAACATAGTAATGACACTGGT-TCTCCAAATTTCTGGTCATTATAAGAACTGCTCATCCATCTCTAAAATGTAA-AGGTTgc i calJac3.chr12 C 0 C 0 s mm10.chr14 24208240 230 + 124902244 CCACACTT--------------------------------------------------------------GATTTGTCCTCTATGTGCACAACTCACCCAAAACAACACATGAGGCTAGCACATGAGGATTTGATGCAGGTTCTCCACCCTCAGAGGTGACACTATAGTGTTCTTTGCAAAGTCTGAGGACAGGTACCTTCAACTTG-----------GATAAGCAAAG-------CAACAGTGCTTATCTCTCCCCTTTTGGGGTCATCAAAAGGACAACAAATCTAACTTGCAAAGGTGGTAGGTAGC i mm10.chr14 C 0 I 2502 e canFam3.chr4 27763826 561 + 88276631 I a score=1118898.000000 s hg38.chr10_KI270825v1_alt 114951 395 + 188315 caggtgaggtggctc-atgcctgtaatcccagcactttgggaggctgaagcaggaggatcactt-aggtcaggagttcaagaccagcctgggcaatatagcaagacccc-atctctcttttttttttttttttttt-----gaaagagagtctcactctgttgcccaggctggagtgcagtggcacaatcttagctcactgtaacctccacctcccaggttcaagctattctcgagcctcagcctcctgagtagctgggactacaggcat----gcaccaccatgcctggcta--ttttgtattttttagtaaagacggggtttcaccacgttggccaggccggtctcgaactcctgacttcaggtgatccaccccaaaatgctggaattacaggcatgagccaccaca s panTro4.chr10 76492373 392 + 133524379 caggtgaggtggctc-atgcctgtaatcccagcactttgggaggctgaagcaggaggatcactt-aggtcaggagttcaagaccagcctgggcaatatagcaagaccccCAtctctcttttttttttttttt---------gaaagagagtctcactctgttgcccaggctggagtgcagtggcgcaatcttagctcactgtaacctccacctcccaggttcaagctattctcgagcctcagcctcctgagtagctgggactacaggcat----gcaccaccatgcctggcta--ttttgtattttttagtaaagacggggtttcaccacgttggccaggccggtctcgaactcctgacttcaggtgatccaccccaaaatgctggaattacaggcatgagccaccaca i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76154651 382 - 133410057 caggtgaggtggctc-atgcctgtaatcccagcactttgggaggctgaagcaggaggatcactt-aggtcaggagttcaagaccagcctgggcaatatagcaagacccc-atc---------tttttttttt---------gaaagagagtcttgctctgttgcccaggcaggagtgtagtagcacaatcttagctcactgtaacctccacctcccaggttcaagctattctcgagcctcagcctcctgagtagctgggactacaggcac----gcaccaccaggcctgacta--ttttgtattttttagtaaagacagggtttcaccacgttggccaggctggtctcgaactccggacttcaggtgatccaccccaaaatgctggaattacaggcatgagccaccaca i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35096987 393 + 104879549 caggtgaggtggctc-atgcctgtaatcccagtactttgggaggctgaagcaggaggatcactt-aggtcaggagttcaagaccagcctgggcaatatagcaagacccc-atcttttttttttttttttttt--tt-----gaaagagagtctcactctgttgcccaggctggagtgcagtggcgcaatcttagctcactgtaacgtctacctcccaggttcaagttattctcgagcctcagcctcctgagtagctgggactacaggcac----gcaccactacgcctggcta--ttttgtattttttagtaaagatggggtttcaccacattggccaggctggtctcgaactcctgactttaggtgatccaccccaaaatgctggaattacagatataagccaccaca i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73891775 396 - 130959383 caggtgaggtggctctctgcctgtaatcccagcactgtgggaggctgaagcagaaggatcactt-aggtcaggagttcaagaccaccctgggcaatatagcaagaaccc-Atcttttttttttttttttttttttt-----taaacagagtctcgctgtgtcgcccaggctggagtggagtggtgcaatctcagctcactgtaacctctacctcccaggttcaagctattctcgagcctcagcctcctgagtagctgggactacaggcac----gcaccaccatgcctggcta--ttttgtattttttagtagagacggggtttcaccatgttggccaggctggtctcgaactccctccctcaactgatccaccccaaaatgttggaattataggcatgagccaccacA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75452438 396 - 133195287 caggtgaggtggctctctgcctgtaatcccagcactgtgggaggctgaagcagaaggatcactt-aggtcaggagttcaagaccaccctgggcaatatagcaagaaccc-Atcttttttttttttttttttttttt-----taaacagagtctcgctgtgtcgcccaggctggagtggagtggtgcaatctcagctcactgtaacctctacctcccaggttcaagctattctcgagcctcagcctcctgagtagctgggactacaggcac----gcaccaccatgcctggcta--ttttgtattttttagtagagacggggtttcaccatgttggccaggctggtctcgaactccctccctcaactgatccaccccaaaatgttggaattataggcatgagccaccacA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73315762 402 - 125196307 caggtgaggtggctctctgcctgtaatcccagcactgtgggaggctgaagcagaaggatcactt-aggtcaggagttcaagaccaccctgggcaatatagcaagaaccc-atcttttttttttttttttttttttt---aaaaaacagagtctcgctctgtcgcccaggctggagtggagtggcgcaatctcagctcactgtaacctctacctcccaggttcaagctattctcgagcctcagcctcctgagtagctgggactacaggcactcatgcaccaccatgcctggcta--ttttgtattttttagtagagacggggtttcaccatgttggccaggcttgtctcgaactccttacctcaactgatccaccccaaaatgttggaattataggcatgagccaccaca i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72148498 401 - 125710982 caggtgaggtggctctctgcctgtaatcccagcactttgggaggctgaagcggaaggatcactt-aggtcaggagttcaagactaccctgggcaatacagcaagacccc-Atctttttttttttttttttttttttttttttaaacagagtctcgctctgtcgcccaggctggagtggagtggcgcaatctcagctcactgtaacctctacctcccaggttcaagctattctcgagcctcagcctcctgagtagccgggactacaggcac----gcaccaccatgcctggcta--ttttgtattttttagtagagacggggtttcaccatgttggccaggctggtctcgaactccctacctcaactgatccaccccaaaatgttggaattataggcatgagccaccacA i chlSab2.chr9 C 0 I 40 s calJac3.chr12 75607970 386 - 121768101 caggtgaggtggctc-atgcctgtaatcccagcactct-aaaagctaaactgggaggatcacttaaggtcaggagttcaagactggcctgggcaacagagcaagacccccatctcttttttttt-----------------gaaacagagtctcactctgtcatggaggctggagtgcaatggcacaatcttggctcactgtaacctccacctcccaggttcaagccattcttgtggctcagcctcctgagtaactaggactacaggctc----atgccaccaagcccggctaatttttgtattttttagtaaagacagagtttcaccaggttggccaggctgaccttaaactcctgaccttaggtgatccaccccaaagcatcagaattacaggtgtgagccaccaca i calJac3.chr12 C 0 C 0 e canFam3.chr4 27763826 561 + 88276631 I e mm10.chr14 24208470 2502 + 124902244 I a score=42520.000000 s hg38.chr10_KI270825v1_alt 115346 53 + 188315 cccagccaatcccatcttttttttctaagaggaaggaaggaaggaaggaagga s panTro4.chr10 76492765 53 + 133524379 cccagccAATCCCATCTTTTTTTTCTAAgaggaaggaaggaagggagggaggg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76155033 44 - 133410057 cccagccgatcccatcttttttttctaagagggaggaaggaagg--------- i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35097380 52 + 104879549 cccagccgatcccatcttttttttctaagaggaaggaaggaagg-aggaagga i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73892171 34 - 130959383 -GCAGCTGACCCCATATTTTTTTTCAGAAAgaggg------------------ i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75452834 34 - 133195287 -GCAGCTGACCCCATATTTTTTTTCAgaaagaggg------------------ i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73316164 34 - 125196307 -gcagcTGACCccatattttttttcagaaagagag------------------ i papAnu2.chr9 C 0 C 0 s calJac3.chr12 75608356 21 - 121768101 cacagccaaccccatctcttt-------------------------------- i calJac3.chr12 C 0 C 0 e canFam3.chr4 27763826 561 + 88276631 I e mm10.chr14 24208470 2502 + 124902244 I e chlSab2.chr9 72148899 40 - 125710982 I a score=827110.000000 s hg38.chr10_KI270825v1_alt 115399 333 + 188315 ag-------ggagggaggga-gggagggaaggaagggaaggaaggaag----gaaAAAAAAAAAGTAAAGGGGAAGGGGCATTGCCCAGATAATTGGAGATTTAACCTCAGGTATGCAGTGAGATCTGTGTGGGGTGGCAGGAAGGAAGATGATGGCTGCCGAGCTCTCTGTCCAT---TCTTTtttttttt--tttaaactttatattttaaaataaatagagacagg-gtctctctttgttgcccaggctggtctcaaacttctaggctcaagcaatctgctcgcctcagcctcccaaagtgctgggattacaggtgtgcgccaccacacctggcTTTTGTGTCCATTC s panTro4.chr10 76492818 332 + 133524379 ag-------ggagggagggaagggagggagggaagg-aaggaaggaA------AAAAAAAAAAAGTAAAGGGGAAGGGGCATTGCCCAGATAATTGGAGATTTAACCTCAGGTATGCAGTGAGATCTGTGTGGGGTGGCAGGAAGGAAGATGATGGCTGCCGAGCTCTCTGTCCAT---TCttttttttttt-ctttaaactttatattttaaaataaatagagacagg-gtctctctttgttgcccaggctggtctcaaacttctaggctcaagcaatccgctcgcctcagcctcccaaagtgctgggattacaggtgtgcgccaccacacctggcTTTTGTGTCCATTC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76155077 304 - 133410057 -------------------------------------aaggaaggaa------aaaaaaaaaaaGTAAAGGGGAGGGAGCATTGCCCAGATAATTAGAGATTTAACCTCAGGTATGCAGTGAGATCTGTGTGGGGTGGCAGGAAGGAAGATGATGGCTGCCCAGCTCTCCGTCCAT---TCTtttttttttttttttaaactttatattttaaaataaatagagacagg-gtctctctctgttgctcaggctggtctcaaacttctaggctcaagcaatccgctcgcctcagcctcccaaagtgctgggattacaggtgtgcaccaccacacctggctTTTGTGTCCATTC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35097432 341 + 104879549 agcaagcaaggaaggaagga-aggaaggaaggaagg-aaggaaggaaga-aaaaaaaaaaaaaAGTAAAGGGGAGGGGGCATTGCCCAGATGATTGGAGATTTCATCTCAGGTATGCAGTGAGATCTGTGTGGGGTGGCAGGAAGGAAGATGATGGCTGCCGAGCTCTCTGTCCAT---TCTTTtttttttt---tttaactttatattttaaaataaatagagacagg-gtctctctttgttgcccaggctggtctcaaacttctaggctcaagcaatccgctcgcctcagcctcccaaagcactgggattacaggtgtgcaccaccacacctggcTTTTGTGTCCATTC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73892205 328 - 130959383 -----------agggaggga-gggag----ggaagg-aaggaaggaAAATAGAGAAAAAAAAAGGTAAAGGGGAGGGGGCATTGCCCAGACAATTGGAGATTTAACCTCAGGTATGCAGTGAGATCTGTGTGGAGTGGCAGGAAGGAAGATGATGCTTGCTGAGCTCTCTGTCCAT---TCTTTTTTTTTTT-TCTTCAATTCTATATTTTAAAATAAAtagagacagg-gtctctctttgttgcccaggctggtcttgaacttctgggctcaagcaatctgctcacctcagcctcccaaagtgctgggatta-aggtttgcgccactgcatctggcTTTTGTGTCTATTC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75452868 332 - 133195287 -----------agggaggga-gggagggaaggaagg-aaggaaggaaAATAGAGAAAAAAAAAGGTAAAGGGGAGGGGGCATTGCCCAGACAATTGGAGATTTAACCTCAGGTATGCAGTGAGATCTGTGTGGAGTGGCAGGAAGGAAGATGATGCTTGCTGAGCTCTCTGTCCAT---TCTTTTTTTTTTT-TCTTCAATTCTATATTTTAAAATAAAtagagacagg-gtctctctttgttgcccaggctggtcttgaacttctgggctcaagcaatctgctcacctcagcctcccaaagtgctgggatta-aggtttgcgccactgcatctggcTTTTGTGTCTATTC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73316198 321 - 125196307 -----------agggag-------------ggaagg-aaggaaggaaaatagagaaaaaaaaaggtaaaggggAGGGGGCATTGCCCAGACAATTGGAGATTTAACCTCAGGTATGCAGTGAGATCTGTGTGGAGTGGCAGGAAGGAAGATGATGCTTGCTGAGCTCTctgtccat--cttttttttttttt-tcttcaattctatattttaaaataaatagagacagg-gtctctctttgttgcccaggctggtcttgaacttctgggctcaagcaatctgctcgcctcagcctcccaaagtgctgggatta-aggtttgcgccactgcacctggcttttgtGTCTATTC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72148939 331 - 125710982 -----------agggaggga-gggag----tgaggg-aaggaaggaaAATAGAGAAAAAAAAAGGTAAAGGGGAGGGGGCATTGCCCAGACAATTGGAGATTTAACCTCAGGTATGCAGTGAGATCTGTGTGGAGTGGCGGGAAGGAAGATGATGCTTGCCGAGCTCTCTGTCCATTCTTTTTTTTTTTTTT-TCTTCAATTCTATGTTTTAAAATAAAtagagacagg-gtctctctttgttgcccaggctggtcttgaacttctgggctcaagcaatctgctcgcctcagcctcccgaagtgctgggatta-aggtttgcgccactgcacctggcTTTTGTGTCTATTC i chlSab2.chr9 I 40 C 0 s calJac3.chr12 75608377 281 - 121768101 ----------------------------------------------aaaaaaaaaaaaaaaaAAGTAAAGGCAAGGGGGCATTACCCAGATAATTTAA---------TCAGGCGTGCAGTGAGATCTGTGTGGG--GACAGGAAGGAAGATGATGCCTGCTGAGCTCTCTGTCCAt---tttcttcttttta--------ctttgtattttaaaataaatagagacaagtatctctctctgtttcccaggctggtctcaaacttctgagctcaaatgatccacccacctcgaccttccaaagtgctgggatgacacgtatgTGT--GTGCACCTGGCTTGTGTGTCCATTC i calJac3.chr12 C 0 C 0 e canFam3.chr4 27763826 561 + 88276631 I e mm10.chr14 24208470 2502 + 124902244 I a score=4425395.000000 s hg38.chr10_KI270825v1_alt 115732 1388 + 188315 CTTAACACATTCCCTAACCCCTTCCCACTGGACTTTTGAGGCCATTTATAAAATAATGAACTAAATTGCCTGAACCTGAGAAAACTCTCGTA---TCAATTTTGCCATCTGTGACTCCC--CTCCCTTCCCCACCCAAAATGCCCC-AAGGCAAAAATATGTAAAG-----------------------------AGAGGGAAAACAAAACATGTGCAC-CCCAGAATTAAATCATTCAGTACCATGCAAGACCCTTCACTCGCTAACTACAGGACTGGTTTTGGTCTTTTTCTTT---AC----TTTTTTTTTTTT---CCTCTTTTAAGTGGCAAGTGACAGGGACTA-----AAAAAAAATAAAATAAAACTAGCACAT---AAAGGAAAGATGGAAGTTTGTTGAATTTCGAGGGATGAAAAGAGTCCACAGTTGGATAGCCTGCTTGTCTTCATCAGCGAAGCAAAGGCTCCTGGAGGCTTTGGGATGAGCACAAAGCCTGTGTCTGATGAAAGCCACCCTCTTTGTTCTGCCTCCCTTCAGAGCTGCCGGGCTGCAGGTTGGGGATGGGAGCAGGGAGGGAGGGAAGGCAGTGGGAGGACCTAAGACCATCA-AACCTGACACCAGGTGGGACCACCTCTCGGTTCCTGCTTTCCATCACCAAAACCAAGCCCTGCTCCCTGCTGTCA-CTTCTGGCCAGACTAAG--ACAGTTCTGCACCTAAAAGGCACAGGAGGAGGCCCAAAG-AGGGTCTGATTA-------AGGAGGAGGATGGGGCCATCGTGCTAT------------------------------GCCCTG-----------GAAGGTGGGGGTGGAGGGGGGACAACGAACATAGCCAAGCCTGACAGCACCCAC--AAGGCGAGGTG------TGAAGGAGTGGAGCAG------------CGCCTCTGCCC--CGCCACCCTGACAGCACATGTCACACCAA--------ACCCAG---------ACAGGAAATCTGAGCAGCAGGGGCACCCAAGAGGCAGCCAAGCCTCCATTATGCTCCAGCCGGACATCCCCCGGGGGCCATGTCTGCCCTAGAATAAACTTCTGATAAGCCCCAGAAGTCACAACAGGCAGGAAGCAGCTCTCTGAAAGGCACCGGGCACCCCCGGCTCCCTCCTGCTCTGGCCCGGTGCTCAATTTCCACTAG-----TCAGTAAATGGAGAAGAGGCTGCCTCCCTCCCACACAGGATGGAGCGCATACCTTGCAGAGTACACTGCCCTCCACC-CTCCCAGGGCAACTGTAGCAAG------Gcag--gctctgcgtcagaccggctggctcaggcctgccactcaccagctgtgtgacctcaaataagttgcttctactttctgtg---catttcctcatttataaa-ataggaagaatagtaggtgatgagaacagaatgagcaacgagagggaaagcccttagaacagagccaggcgcacagcaagcgatccacaaaCACCAGCTCTCGTTACTGTTACCGTC s panTro4.chr10 76493150 1409 + 133524379 CTTAACACATTCCCTAACCCCTTCCCACTGGACTTTTGAGGCCATTTATAAAATAATGAACTAAATTGCCTGAACCTGAGAAAACTCTCGTA---TCAATTTTGCCATCTGTGACTCCC--CTCCCTTCCCCACCCAAAATGCCCC-AAGGCAAAAATATGTAAAG-----------------------------AGAGGGAAAACAAAACATGTGCAC-CCCAGAATTAAATCATTCAGTACCATGCAAGACCCTTCACTCGCTAACTACAGGACTGGTTTTGGTCTTTTTCTTT---AC----TTTTTTTTTTTT--TCCTCTTTTAAGTGGCAAGTGACAGGGACTA-----AAAAAAAATAAAATAAAACTAGCACAT---AAAGGAAAGATGGAAGTTTGTTGAATTTCGAGGGATGAAAAGAGTCCACAGTTGGATAGCCTGCTTGTCTTCATCAGCGAAGCAAAGGCTCCTGGAGGCTTTGGGATGAGCACAAAGCCTGTGTCTGATGAAAGCCACCCTCTTTGTTCTGCCTCCCTTCAGAGCTGCCGGGCTGCAGGTTGGGGATGGGAGCAGGGAGGGAGGGAAGGCAGTGGGAGGACCTAAGACCATCA-AACCTGACACCAGGTGGGACCACCTCTCGGTTCCTGCTTTCCATCACCAAAACCAAGCCCTGCTCCCTGCTGTCA-CTTCTGGCCAGACTAAG--ACAGTTCTGCACCTAAAAGGCACAGGAGGAGGCCCAAAG-AGGGTCTGATTA-------AGGAGGAGGATGGGGCCATCATGCTAT------------------------------GCCCTG-----------GAAGGTGGGGGTGGAGGGGGGACAACGAACATAGCCAAGCCTGACAGCACCCAC--AAGGCGAGGTG------TGAAGGAGTGGAGCAGGGCCGGCCGCAGCGCCTCTGCCC--CGCCACCCTGACAGCACATGTCACACCAA--------ACCCAG---------ACAGGAAATCTGAGCAGCAGGGGCACCCAAGAGGCAGCCAAGCCTCCATTATGCTCCAGCCGGACATCCCCCGGGGGCCATGTCTGCCCTAGAATAAACTTCTGATAAGCCCCAGAAGTCACAACAGGCAGGAAGCAGCTCTCTGAAAGGCACCGGGCACCCCCGGCTCCCTCCTGCTCTGGCCCGGTGCTCAATTTCCACTAG-----TCAGTAAATGGAGAAGAGGCTGCCTCCCTCCCACACAGGATGGAGCGCATACCTTGCAGAGTACACTGCCCTCCACC-CTCCCAGGGCAACTGTAGCAGGTCTGATGCAGCTGGTCTGCATCAGACCAGCTGGctcaggcctgccactcaccagctgtgtgacctcaaataagttgcttctactttctgtg---catttcctcatttataaa-ataggaagaatagtaggtgatgagaacagaatgagcaacgagagggaaagcccttagaacagagccaggcgcacagcaagcgatccacaaaCACCAGCTCTCGTTACTGTTACCGTC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76155381 1407 - 133410057 CTTAACAC--TCCCTAACCCCTTCCCACTGGACTTTTGAGGCCATTTATAAAATAATGAACTAAATTGCCTGGACCTGAGAAAACTCTCACA---TCAATTTTGCCACCTGTGACTCCC--CTCCCTTCCCCACCCAAAATGCCCC-AAGGCAAAAATATGAAAAG-----------------------------AGAGGGAAAACAAAACATGTGCAC-CCCAGAATT-AACCATTCAGTACCATGCAAGACCCTTCACTCGCTAACTACTGGACTGGTTTTGGT-TTTTTCTTT---AC----TTTTTTCTTTTTTTTCCTCTTTTAAGTGGCAAGTGACAGGGACTA-----AAAAAAAAAAAAAC--ACCTGGCACAT---AAAGGAAAGATGGAAGTTTGTTGAATTTCGAGGGATGAAAAGAGTCCACAGTTGGACAGCCTGCTTGTCTTCATCAGTGAAGCAAAGGCTCCTGGAGGTTTTGGGATGAGCACAAAGCCTGTGTCTGATGAAAGCCACCCTCTTTGTTCTGCCTCCCTTCAGAGCTGCCGGGCTGCAGGTTGGGGATGGGACCAGGGAGGGAGGGAAGGCAGTGGGAGGACCTAAGACCATCA-AACCTGACACCAGGTGGGACCACCTCTCGGTTCCTGCTTTCCATCACCAAAACCAAGCCCTGCACCCTGCTGTCA-CTCCTGGCCAGACTAAG--ACAGTTCTGCACCTAAAAGGCACAGGAGGAGGCCCAAAG-AGGGTCTGATTA-------AGGAGGAGGACGGGGCCATCATGCTAT------------------------------GCCCTG-----------AAAGGTGGGGGTGGAGGGGGGACAACAAACATAGCCAAGCCTGACAGCACCCGC--AAAGCGAGGAGCATAGCTGAAGGAGTGGAGCAGGGCCGGCCGCAGCACCTCTGCCC--CGCCACCCTGACAGCACATGTCACACCAA--------ACCCAG---------ACAGGAAATCTGAGCAGCACGGGCACCCAAGGGGCAGCCAAGCCTCCATTATGCTCCAGCCGGACATCCCCCGGGGGCCACGTCTGCCCTGGAATAAACTTCTGATAAGCCCCAGAAGTCACAACAGGCAGGAAGCAGCTCTCTGAAAGGCACCGGGCACCCCCGGCTCCCTCCTGCTCTGGCCCGGTGCTCAATTTCCACCGGGAAATCGAGTAAATGGAGAAGAGGCTGCCTCCCTCCCACACAGGATGGAGCGCATACCTTGCAGAGTACACTGCCCCCCACC-CTCCCAGGGCAACTGTAGCAAG------Gcag--gctctgagtcagaccggctggctcaggcctgccactcaccagctgtgtgacctc-aataagttgcttctactttctgtg---catttcctcatttataaa-ataggaagaatagtaggtgataagaacagaatgagcaaagagagggaaagcccttagaacagagccaggcgcacagcaagcgatccacaaaCACCAGCTCTCGTTACTGTTACCGTC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35097773 1403 + 104879549 CTTAACACATTCCCTAACCCCTTCCCACTGGACTTTTGAGGCCATTTATAAAATAATGAACTAAATTGCCTGAACCTGCGAAAACTCTCACA---TCAATTTTGCCATCTGTGACTCCC--CTCCCTTCCCCACCCAAAATGCCCC-AAGGCAAAAATATGAAAAG-----------------------------AGAGGGAAAACAAGACATGTGCA--CCCAGAATT-AATCATTCAGTACCACGCAAGACCCTTCACTCGCTAACTACTGGACTGGTTTTGGTCTTTTTCTTT---AT----GTTTTTTTTTTT-TTCCTCTTTTAAGTGGCAAGTGACAGGGACTT-----aaaaaaaaaaaaaaaaaaCTGGCCCAT---AAAGGAAAGATGGAAGTTTGTTGAATTTCGAAGGATGAAAAGAGTCCACAGTTGGATAGCCTGCTTGTCTTCATCAGCGAAGCAAAGGCTCCTGGAGGCTTTGGGATGAGCACAAAGCCTGTGTCTGATGAAAGCCACCCTC--TGTTCTGCCTCCCTTCAGAGCTGCCGGGCTGCAGGTTGGGGATGGGAGCAGGGAGGGAGGGAAGGCAGTGGGAGGACCTAAGACCATCA-AACCGGACACCAGGTGGGACCACCTCTCGGTTCCTGCTTTCCAACACCAAAACCAAGCCCTGCTCCCTGCTGTCA-CTCCCGGCCAGACTAAG--ACAGTTCTGCACCTAAAAGGCACAGGAGGAGGCCCAAAG-AGGGTCTGATGA-------AGGAGGAGGAC-GGGTCATCGTGCTAT------------------------------GCCCTG-----------GAAGGTGGGGGTGGAGGGGGGACAACGAACATAGCCAAGCCTGACAGCACCCGC--AAGGCAAGGAGCATAGCTGAAGGAGTGGAGCAGGGCCGGCCGCAGTGCCTCTGCCC--CGCCATCCTGACAGCACATGTCACACCAA--------ACCCAG---------ACAGGAAATCTGAGCAGCACGGGCACCCAAGGGGCAGCCAAGCCTCCATTATGCTCCAGCCGGACATCCCCCAGGGACCATGTCTGCCCCGGAATAAACTTCTGATAAGCCCCAGAAGTCACAACAGGCAGGAAGCAGCTCTCTGAAAGGCACCAGGCACCCCCGGCTCCCTCCTGCTCTGGCCCGGTGCTCAATTTCCACTAG-----TCAGTAAATGGAGAAGAGGCTGCCTCCCTCCCACACAGGATGGAGCACATACCTTGCAGAGTTCACTGCCCTCCCCA-CTCCCAGGGCAACTGTAGCAAG------Gcag--gctctgcgtcagaccagctggctcaggcctgccactcaccagctgtgtgacctcaaataagttgcttctactttctgtg---catttcctcatttataaa-ataggaagaatagtaggtgatgagaacagaatgagcaaagagagggaaagcccttagaacagagccaggcgcacagcaagcgatccacaaaCACCAGCTCTCGTTCCTGTTACCGTC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73892533 1440 - 130959383 CTTAACACATTCCCTAATCCCTTCCCACTGGACTTTTGAGGCCATTTATAAAATAATGAACTAAATTGCCTGAACCTGAGAAAACTCTCACA---TCAATTTTGCCATCTGTGACTCCC--CTCCCTTCCCCACCCAAAATGCCCC-AAGGCAAAAATATGAAA-------------------------------AGAGGGAAAACAAAACATGTGCA--CCCAGAATT-AATCATTCAGTACCATGCAAGACCCCTCACTCGCTAACTACTGGACTGGTTTTGGTCTTTTTCTGT---AC-------TTTTTTTTT---CCTCTTTTAAGTGACAAGTGACAGGGATTT-aaaaaaaaaaaaaaaaaaaaaaCTGGCACAT---GAAGGAAAGATGGAAGTTTGTTAAATTTCGAGGGATGAAAAGAGTCCACAGTCGGATAGCCTGCTTGTCCTCATCAGCAAAGCAAAGGCTCCTGGAGGCTTTGGGATGAGCACAAAGCCTGTGTCTGATGAAAGCCACCCTCTTTGTTCTGCCTCCCTTCAGAGCTGCCTGGCTGCAGGCTGGGGATGGAAGCAGGTAGGGAGGGAAAGCAGTGGGGAGACCTAAGACCATCA-AACCTGACACCAGGTGGGAACACCTCTCAGTTCTTGCTTTCCATCACCAAAACCAAGCCCTGCTCCCTGCTGTCA-CTCCTAGCCAGGCTGAG--ACAGTTCTGCACCAAAAAGGCACAGGAGGAGGCCCAAAG-AGGGTCTGATGAACTCGGCAGGAGGACGACGGGGCCATCGTGCTATGTCTGATGAACTCGGCAGGAGGACGACGAGGCCCTG-----------GAAGGTGTGGGTGGAGGGGGCACAATGAACATAGCCAAGCCTGACAGCACCCGC--AAGGCAAGGAGCACAGCTGAAGGAGCGGAGCAGGGCCGGTCGCAGCACCTCTGCCC--CACCACCCTGACAGCACATGCCACACCAA--------ACCCAG---------ACACGAAATCTGAGCAGCACAGGCACCCAAGGGGCAGCCAAGCCTCCATTATGCTCCAGCCGGACATCCCCCGGGGGCCATGTCTGCCCTGGAATAAACTTCCAATAAGCCCCAGAAGTCA-GACAGGCAGGAAGCAGCTCTCTGAAATGCACCAGGCACCCCCGGCTCCCTCCTGCTCTGGCCCGGCACTCAGTTTCCACCAG-----TCAGTAAATGGAGAAGAGGCTGCCTCCCTCCCACACTGGATGGAGCGCATACCTTGCAGAGTACACTGCCCTCCACC-CTCTCAGGGCAACTGTACCAag------gcag--gctctgcgtcggaccagctggctcaggcctgccactcgccagttgtgtgacctcaaataagttgcttctactttctgtg---catctcctcatttataaacataagaagaataataggtgatgagaacagaatgagcaaagagagggaaagcccttagaacagagccaggcacacagcaagcaatccacaaacaccagctctCGTTACTGTTATCCTC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75453200 1410 - 133195287 CTTAACACATTCCCTAATCCCTTCCCACTGGACTTTTGAGGCCATTTATAAAATAATGAACTAAATTGCCTGAACCTGAGAAAATTCTCACA---TCAATTTTGCCATCTGTGACTCCC--CTCCCTTCCCCACCCAAAATGCCCC-AAGGCAAAAATATGAAA-------------------------------AGAGGGAAAACAAAACATGTGTA--CCCAGAATT-AATCATTCAGTACCATGCAAGACCCCTCACTCGCTAACTACTGGACTGGTTTTGGTCTTTTTCTGT---AC------TTTTTTTTTT---CCTCTTTTAAGTGACAAGTGACAGGGATTT--aaaaaaaaaaaaaaaaaaaaaCTGGCACAT---GAAGGAAAGATGGAAGTTTGTTAAATTTCGAGGGATGAAAAGAGTCCACAGTCGGATAGCCTGCTTGTCCTCATCAGCAAAGCAAAGGCTCCTGGAGGCTTTGGGATGAGCACAAAGCCTGTGTCTGATGAAAGCCACCCTCTTTGTTCTGCCTCCCTTCAGAGCTGCCTGGCTGCAGGCTGGGGATGGAAGCAGGTAGGGAGGGAAAGCAGTGGGGAGACCTAAGACCATCA-AACCTGACACCAGGTGGGAACACCTCTCAGTTCTTGCTTTCCATCACCAAAACCAAGCCCTGCTCCCTGCTGTCA-CTCCTAGCCAGGCTGAG--ACAGTTCTGCACCAAAAAGGCACAGGAGGAGGCCCAAAG-AGGGTCTGATGAACTCGGCAGGAGGACGACGGGGCCATCGTGCTAT------------------------------GCCCTG-----------GAAGGTGTGGGTGGAGGGGGCACAATGAACATAGCCAAGCCTGACAGCACCCGC--AAGGCAAGGAGCACAGCTGAAGGAGCGGAGCAGGGCCGGTCGCAGCACCTCTGCCC--CACCACCCTGACAGCACATGCCACACCAA--------ACCCAG---------ACACGAAATCTGAGCAGCACAGGCACCCAAGGGGCAGCCAAGCCTCCATTATGCTCCAGCCGGACATCCCCCGGGGGCCATGTCTGCCCTGGAATAAACTTCCAATAAGCCCCAGAAGTCA-GACAGGCAGGAAGCAGCTCTCTGAAATGCACCAGGCACCCCCGGCTCCCTCCTGCTCTGGCCCGGCACTCAGTTTCCACCAG-----TCAGTAAATGGAGAAGAGGCTGCCTCCCTCCCACACTGGATGGAGCGCATACCTTGCAGAGTACACTGCCCTCCACC-CTCTCAGGGCAACTGTACCAag------gcag--gctctgcgtcggaccagctggctcaggcctgccactcgccagttgtgtgacctcaaataagttgcttctactttctgtg---catctcctcatttataaacataagaagaataataggtgatgagaacagaatgagcaaagagagggaaagcccttagaacagagccaggcacacagcaagcaatccacaaacaccagctctCGTTACTGTTATCCTC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73316519 1411 - 125196307 CTTAACACATTCCCTAACCTCTTCCCACTGGACTTTTGAGGCCgtttataaaataatgaactaAATTGCCTGAACCTGAGAAAACTCTCACA---TCAATTTTGCCATCTGTgactccc--ctcccttccccacccaaaATGCCCC-AAGGCAAAGataagaaa-------------------------------agagggaaaacaaaacatGTGCA--CCCAGAATT-AATCATTCAGTACCATGCAAGACCCCTCACTCGCTAACTACTGGACTGGTTTTGgtctttttctgt---ac----tttttttttttt---cctcttttaagtgACAAGTgacagggattt---aaaaaaaaaacaaaaaaaaaccggCACAT---GAAGGAAAGATGGAAGTTTGTTAAATTTCGAGGGATGAAAAGAGTCCACAGTCGGATAGCCTGCTTGTCCTCATCAGCAAAGCAAAGGCTCCTGGAGGCTTTGGGATGAGCACAAAGCCTGTGTCTGATGAAAGCCACCCTCTTTGTTCTGCCTCCCTTCAGAGCTGCCTGGCTGCAGGCTGGGGATGGGAGCAGGTAGGGAGGGAAAGCAGTGGGGAGACCTAAGACCATCA-AACCTGACACCAGGTGGGAACACCTCTCAGTTCTTGCTTTCCATCACCAAAACCAAGCCCTGCTCCCTGCTGTCA-TTCCTGGCCAGGCTGAG--ACAGTTCTGCACCAAAAAGGCACAAGAGGAGGCCCAAAG-AGGGTCTGATGAACTCGGCAGGAGGACGACGGGGCCATCGTGCTAT------------------------------GCCCTG-----------GAAGGTGTGGGTGGAGGGGGGACAATGAACATAGCCAAGCCTGACAGCACCCGC--AAGGCGAGGAGCACAGCTGAAGGAGCGGAGCAGGGCCGGTCGCAGCACCTCTGCCC--CACCACCCTGACAGCACATGCCACACCAA--------ACCCAG---------ACACGAAATCTGAGCAGCACGGGCACCCAAGGGGCAGCCAAGCCTCCATTATGCTCCAGCCGGACATCCCCCGGGGGCCATGTCTGCCCTGGAATAAACTTCCAATAAGCCCCAGAAGTCA-GACAGGCAGGAAGCAGCTCTCTGAAATGCACCAGGCACCCCCGGctccctcctgctctggcccGGCACTCAGTTTCCACCAG-----TCAGTAAACGGAGAAGAGGCTGCCTCCCTCCCACACTGGATGGAGCGCATACCTTGCAGAGTACAGTACCCTCCACC-CTCTCAGGGCAACTGTACCAAG------GCAG--GCTCTGCATCAGACCGGCTGGCTCAGGCCTGCCACTCGCCAGTTGTGAGACCTCAAATAAGTTGCTTCTACTTTCTGTG---TATCTCCTCATTTATAAACATAGGAAGAATAATAGGTGATGAGAACAGAATGAGCAAAGAGAGGGAAAGCCCTTAGAACAGAGCCAGGCACACAGCAAGCAATCCACAAACACCAGCTCTCGTTACTGTTATCCTC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72149270 1420 - 125710982 CTTAACACATTCCCTAACCCCTTCCCACTGGACTTTTGAGGCCATTTATAAAATAATGAACTAAATTGCCTGAACCTGAGAAAACTCTCACA---TCAATTTTGCCATCTGTGACTCCC--CTCCCTTCCCCACCCAAAATGCCCC-AAGGCAAAAATATGAAA-------------------------------AGAGGGAAAACAAAACATGTGCA--CCCAGAATT-AATCATTCAGTACCATGCAAGACCCCTCACTTGCTAACTACTGGACTGGttttggtctttttctgt---actttttttttttttttt---cctcttttAAGTGACAAGTGACAGGGATTTaaaaaaaaaaaaaaaaaaaaaaaCTGGCACAT---GAAGGAAAGATGGAAGTTTGTTAAATTTCAAGGGATGAAAAGAGTCCACAGTCGGATAGCCTGCTTGTCCTCATCAGCAAAGCAAAGGCTCCTGGAGGCTTTGGGATGAGCACAAAGCCTGTGTCTGATGAAAGCCACCCTCTTTGTTCTGCCTCCCTTCAGAGCTGCCGGGCTGCAGGCTGGGGATAGGAGCAGGTAGGGAGGGAAAGCAGTGGGGAGACCTAAGACCATCA-AACCTGACACCAGGTGGGAACACCTCTCGGTTCTTGCTTTCCATCACCAAAACCAAGCCCTGCTCCCTGCTGTCA-CTCCTGGCCAGGCTGAG--ACAGTTCTGCACCAAAAAGGCACAGGAGGAGGCCCAAAG-AGGGTCTGATGAACTCGGCAGGAGGACGACGGGGCCATCGTGCTAT------------------------------GCCCTG-----------GAAGGTGTGGGTGGAGGGGGGACAATGAACATAGCCAAGCCTGACAGCACCCGC--AAGGCAAGGAGCACAGCTGAAGGAGCAGAGCAGGGCCAGTCGCAGCGCCTCTGTCCCACACCACCCTGAAAGCACATGCCACACCAA--------ACCCAG---------ACACGAAATCTGAGCAGCACGGGCACCCAAGGGGCAGCCAAGCCTCCATTATGCTCCAGTCGGACATCCCCCGGGGGCCATGTCTGCCCTGGAATAAACTTCCAATAAGCCCCAGAAGTCATGACAGGCAGGAAGCAGCTCTCTGAAATGCACCAGGCACCCCCGGCTCCCTCCTGCTCTGGCCCGGCACTCAGTTTCCACCAG-----TCAGTAAATGGAGAAGAGGCTGCCTCCCTCCCACACCGGATGGAGCACATACCTTGCAGAGTACACTGCCCTCCACC-CTCTCAGGGCAACTGTACCAag------gcag--gctctgcgtcggacc-gctggctcaggcctgccactcgccagttgtgtgacctcaaataagttgcttctactttctgtg---catctcctcatttataaacataggaagaataataggtgatgagaacagaatgagcaaagagagggaaagcccttagaacacagccaggcacacagcaagcaatccacaaacaccagctctCGTTACTGTTATCCTC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75608658 1403 - 121768101 CTTAATACATTCCCTAA------CCCACTGGACTTTTGAGGCCATTTATAAAATAATGAACTAAACTGCCTGAACCTGAGAAAACTCTCACA---TCAATTTTGCCATCTATGACTCCC--CTCCCTTCCCCACCCTAAATGCCCC-AAGGCAAAAATATGAAAAG-----------------------------AGAGGGAAAACACAGCATGTGCA--CCCAGAATC-AATCATTCAATACCATGCAAGACCCTTCGCTCGCTAACTACTGGACTGGTTTTGGTCTTTTTCTT----------GTTTCTTTTTTT---CCTCTTTTAAGAGGCAAGTGACAGCCATTT-----AAAAAAAAAA---------TGGCACATCAAGAAGGAAAGATGGAAGTTTATTGAATTTCAAGGGATGAAAAAAGTCCACAGTCAGATAGCATGCTTGTCCTCATCAGCGAAGCAAAGGCTCCTGGAGGCTTTGGGACGATCACAAAGCCTGTGTCTGATGAAAGCCGCTCTCTTTGTCCTGTCTCCCTTCAGAGTTTCTGGGCTGCAGGTTGGAGATGGGAGCAGGGAGGGAGGGAGAGCAGTGGGGGGACCTGGGACCATC--AACCTGACACCAGGTGGGAACACCTCTTGGTTCTGGCTTTCCATCACCAAAACCAAGCCCTGCTTCCTGCTGTCA-CTCCTGGCCGGGCTGAG--ACAGTTCTGCACCTAAAAGGCACAGGAGGAGACCCAAAG-AGAGTCTGATGAACTCAGCAGGA-GAGGAGGGGACCATTACGCTAT------------------------------GCCCTAGCATAGCATGTGAAGGTGAGGGTGGAGGGGGAACAAGGAACACAGCCAAGCCTGACAGTACCTGA--AAAGTGAGGAGCACAGCTGAAGGAGTGGAGCAGGATAGGCCACAGTGCCTCTGCCC--CGCCACCCTGACAGCACATGCCACACCAA--------GCCCAG---------ACAGGAAATCCGAGCAGAATGGGCACCCAAGGGGCAGCCAAGCCTCCATTATGCTCCAGCCGGACATCCCCCAGGGGGCATGTCTGCCCTGAAATAAACTTCTGATAAGCCCCAGAAGTCACGAGAGGCAGGAAGCAGCTCTCTGAAAGGCACCGGGCA-CCCAGGCTTCCTCCTGCTCCAGCCCAGCATTCAATTTCCACTAC-----TCAGTAAACGGAGAAGAGGCTGCCTCCCTCCCACACTGGATAGAACAAATATCTTGCAGAGTACAGTGCCCTCCACC-CTCCCAGGGCACCCATACCAAT------Gcag--gctctgcatcagactggctggctcaggcctgccactcaccggcagtgtgacctcaaaaaagttgcttctactttctgtg---tatttcctcatttataaa-ataggaagaagaatagctaaggagaacagaatgagcaaagagagggaaagcccttagaacagagccaggtgcacagcaagtgatccacaatcaccagctctcattactGTTACC-TC i calJac3.chr12 C 0 C 0 s canFam3.chr4 27764387 1220 + 88276631 CTCAGCTCATTCCTTGACCCCCTCCCACTGGACTCTGGA-ATCATCTGTGAGATGATGAACTGAGCTAC---ACCCTGAGGAAGCTCCCAGACTGTCAGTGCTGTCATCTGTGATCCACAGCCCCATCTCCCACCACAACTGCCCCAAAAGCTAAAGTCAGAAAAGGTAGGCAAAACAACACACGCaaaaaaaaaaaaaaaaaaaaaaaaCACACGCATGCCGGGAACC-GATCACTCAGTAAGATTAAGGATCCTT----------------------------TCTCTCCCTGTCAGGC----CCTGAGTCCTCC---CCGCCCCCAAGGCGCAAG------------------------------------------AT-----------GATGGAAGTTTGCTGAGTTTCCAGAGATTAAAAA---CAGCCGTCAGAGAGCTTGTTTCCCCTCATCAGCTGGG-AAAGGCTCCTGGAGG---------------------------------------CCTTCTTCGTCAT-CCTGCTGTCAGAG--GTTAAGCTCCAGGATGGGAAT-----------------------ACTGGGAGGAACTGGGACCATCACAACCTGGCACCAGGTGGGAACACCTCTCACTTCTGGCTTTCTGTCACTAAAA-CAAGCC--GTTTTCTTCTGTCATCACCCAAAGGGGCTGGGTTACAGTTCTGCACCG---------AGGACGTGGCCCGAAGCAGGGTCTGCTGGGCTCCCTGGGAG-----------------GCTAG------------------------------TCTTTA----------------TGGGGCCAGGGGGAGGATCAGGACAGGTGTTAAGAGT-----CTCCTACTAAATGCAATGATTCCACCAACAAGCGTGACGGAGCCCAATCAGCATCCCCTAAACCA--CAGC-TCGTGGC----CTTGTCATAGCAACAGGGAGGACCCAGCAAGAGGGCACAGGAAACCAGAGCAGC----TCACCCGTGGGGCAGCCGAGCCCCCACGGTGCCGCAGATGGACAGCTCGCTGCGG-CACATCTGCCCTGGAATAAACTTCTAGCCAGCACCACGAGTCCCAACGGGCACGAAGCAGCTCTCTGCAAGGCCCGGGGCACAGCCAGTTCCCTCCCACTCTCGACTGGGACTCCGTCTCCACTTC-----TCAGTAAAGGGAGAAGAGGCTCCCTCCTC-----------TAGAGACCACACCT---GGAGCGCGCTGCCCTGCACCACTGCCGGGGT--------CGAC------ACAA--GC---------------------------------------gctgtgtggtcctgggcaagtggtttccactttttgtgcctcatatctcggtttataaa-gcaggaagaatgatgggt-atgag--ccaaatgagtaaagagaggtaacgccccgagggcagagccgggcacagggcaagcactccataaaccctagctctcattACTGCTGCCTCC i canFam3.chr4 I 561 I 268 e mm10.chr14 24208470 2502 + 124902244 I a score=760768.000000 s hg38.chr10_KI270825v1_alt 117120 252 + 188315 TCACAGGCTCCTAAGGAAGGCAGGGCATGGGGTGGCCTCTGCAGTGTACACAGACAGCAGATGCTATGGAAGGGACCTGGAGGACAGTCACGCAGCCTTCCCTTGACTTCTGGAGTGTTTTGCTGGTTAGAAGCTCTGCATTGAGTACTCTGTATACTTCCCATCACCATCTCCCTCAGGAGCTAATGCTTCCCCCTCAACCCAGCCATGAGTGTCGCCTCTCAATACCTGAATACAGCTCTATCTATGCCT s panTro4.chr10 76494559 252 + 133524379 TCGCAGGCTCCTAAGGAAGGCAGGGCATGGGGTGGCCTCTGCAGTGTACACAGACAGCAGATGCTATGGATGGGACCTGGAGGACAGTCACGCAGCCTTCCCTTGACTTCTGGAGTGTTTTGCTGGTTAGAAGCTCTGCATTGAGTACTCTGTATACCTCCCATCACCATCTCCCTCAGGAGCTAATGCTTCCCCCTCAACCCAGCCATGAGTGTCGCCTCTCAATACCTGAATACAGCTCTATCTATGCCT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76156788 252 - 133410057 TCGCAGGCTCCTAAGGAAGGCAGGGCATGGGGTGGCCTCTGCAGTGTACACAGACAGCAGATGCTATGGATGGGACCTGGAGGACAGTCACGCAGCCTTCCCTTGACTTCTGGAATGTTTTGCTGGTTAGAAGCTCTGCACTGAGTACTCTGTGTACCTCCCATCACCATCTCCCTCAGGAGCTAATGCTTCCCCCTCACCCTAGCCATGAGTGTCACCTCTCAATACCTGAATACAGCCCTATCTATGCCT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35099176 252 + 104879549 TCGCAGGCTCCTAAGGAAGGCAGGGCATGGGGTGGCCTCTGCAGTGTACACAGACAGCAGATGCTATGGATGGGACCTGGAGGACAGTCACACAGCCTTCCCTTGACTTCTGGAATGTTTTGCTGGTTAGAAGCTCTGCACTGAATACTCTGTGTACCTCCCATCACCATCTCCCTCAGGAGCTAATGCTTCCCCCTCACCCCAGCCATGAGTGTCGCCTCTCAATACCTGAATACAGCCCTATCTATGCCT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73893973 251 - 130959383 TCACAGGCTCTTAAGGAAGGCAGGGCATAGGGTGGCCTCTGCAGTGTACACAGACGGCAGATGCTATGGACGGGACCTGGAGGACAGTCACCCAGCCTTCCCTTGACTTCTGGAATGTTTTGCTCA-TAGAAGCTCTGCACTGAGTACTCTGTGTACCTCCCATAACCATCTCCCTCAAGAGCTAATGCCTCCCCCTCATGCCAGCCATGAGTGTCGCCTCTCAATACCTGAATACAGCCCTATCTATGCCT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75454610 251 - 133195287 TCACAGGCTCTTAAGGAAGGCAGGGCATAGGGTGGCCTCTGCAGTGTACACAGACGGCAGATGCTATGGACGGGACCTGGAGGACAGTCACCCAGCCTTCCCTTGACTTCTGGAATGTTTTGCTCA-TAGAAGCTCTGCACTGAGTACTCTGTGTACCTCCCATAACCATCTCCCTCAAGAGCTAATGCCTCCCCCTCATGCCAGCCATGAGTGTCGCCTCTCAATACCTGAATACAGCCCTATCTATGCCT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73317930 251 - 125196307 TTGCAGGCTCCTAAGGAAGGCAGGGCATAGGGTGGCCTCTGCAGTGTACACAGACGGCAGATGCTATGGACGGGACCTGGAGGACAGTCACCCAGCCTTCCCTTGACTTCTGGAATGTTTTGCTCA-TAGAAGCTCTGCACTGAGTACTCTGTGTACCTCCCATAACCATCTCCCTCAAGAGCTAATGCCTCCCCCTCACGCCAGCCATGAGTGTCGCCTCTCAATACCTGAATACAGCCCTATCTATGCCT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72150690 251 - 125710982 TCACAGGCTCCTAAGGAAGGCAGGGCATAGGGTGGCCTCTGCAGTATACACGGATGGCAGATGCTATGGACGGGACATGGAGGACAGTCACCCAGCCTTCCCTTGACTTCTGGAATGTTTTGCTCG-TAGAAGCTCTGCACTGAGTACTCTGTGTACCTCCCATAACCATCTCCCTCAAGAGCTAATGCCTCCCCCTCACGCCAGCCATGAGTGTCGCCCCTCAATACCTGAATACAGCCCTATCTATGCCT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75610061 251 - 121768101 TTGCAGGCTCCTAAGGAAGGAAGGGCATGGAGTGGCCTCTGCAGTGTACACAGATGTCAGGTGCTACGGACAGGACCTGGAGGACAGTCACCTGGCCTTCCCTTGACCTGTAGAATGTTTTGCTGG-TCGAAGCTCTGTACTGAATACTCTATGTGCCTCCCATTACCATCTCCCTCAAGACCTAATGCCTCCCCGTCACCCCAACTATCAGTGTCATCGCTCAGTATCTGAATATAGTCCTATCTATGCTT i calJac3.chr12 C 0 C 0 e canFam3.chr4 27765607 268 + 88276631 I e mm10.chr14 24208470 2502 + 124902244 I a score=1945321.000000 s hg38.chr10_KI270825v1_alt 117372 579 + 188315 GT----------------GGATAAGGAGGCTTCCTCTCCCCTC--CCACCATTCCACGTGGCCATGG-CAATTCCAAGCCATCCCCAGCATCCCTTATGATTTCTGGTTCTCTGGTTCACAAAGAAAAAACCAGAGCGCTCACAGTGTGCCTGGAATCATACCAGGCTTGCACCTCCACTCATCCAG--TCCTGGCTCCCACC-ACCTACATACAGACATCAGTCAGTGCCCTGTAAAAGATG-------------------------CTACGCATTGGTGGGCATGTCTGTCCC-CGGAAACACAAGGCCcactcattcgccaaac-----------gctgggttaatgctgggt---gaagtact-gggatgcagcaggaagcaagatggaca-aatccctgccctcatggagctcacatgaa-cagggtgacaggggcgggggaga--aataaacaaacataaactgtattgggtagtaagtgctatgaagaaaaatgttgc-agagttaaatggtaggtggtgg---gggtggagaggagatgtggctatt---gtacagcggtggcagggg--tctctctgggcaggtcatctttccccagagacctagaggaagcgtggagtgccagagga----------------gggaatagcaagtgc-aaa s panTro4.chr10 76494811 579 + 133524379 GT----------------GGATAAGGAGGCTTCCTCTCCCCTC--CCACCATTCCACGTGGCCATGG-CAATTCCAAGCCATCCCCAGCATCCCTTATGATTTCTGGTTCTCTGGTTCACAAAGAACAAACCAGAGCGCTCACAGTGTGCCTGGAATCATACCAGGCTTGCACCTCCACTCATCCAG--TCCTGGCTCCCACC-ACCTACATACAGACATCAGTCAGTGCCCTGTAAAAGATG-------------------------CTACGCATTGGTGGGCATGTCTGTCCC-CGGAAACACAAGgcccactcattcgccaaac-----------actgggttaatgctgggt---gaagtact-gggatgcagcaggaagcaagatggaca-aatccctgccctcatggagctcacatgaa-cagggtgacaggggcgggcgaga--aataaacaaacataaactgtattgggtagtaagtgctatgaagaaaaatgtggc-agagttaaatggtaggtggtgg---gggtggagaggagatgtggctatt---gtacagcggtggcagggg--tctctctgggcaggtcatctttccccagagacctagaggaagcgtggagtgccagagga----------------gggaatagcaagtgc-aaa i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76157040 579 - 133410057 GT----------------GGATAAGGAGGCTTCCTCTCCCCTC--CCACCATTCCACGTGGCCATGG-CAATTCCAAGCCATCCCCAGCATCCCTTATGATTTCTGGTTCTCTGGTTCACAAAGAACAAACCAGAGCGCTCACGGTGTGCCTGGAATCACACCAGGCTTGCACCTCCACTCATCCAG--TCCTGGCTCCCACC-ACCTACACACAGACATCAGTCAGTGCCCTGTAAAAGATG-------------------------CTGCTCATTGGTGGGCATGTCTGTCCC-CGGAAACACCAGGcccactcattcaccaaac-----------gctgggttaatgctgggt---gaagtact-gggatgcagcaggaagcaagatggaca-aatccctgccctcatggagctcacatgaa-cagggtgacaggggtgggggaga--aataaacaaacataaactgtattgggtagtaagtgctatgaagaaaaatgtggc-agagttaaatggtaggtggtgg---gagtggagaggagatgtggctatt---gtagagtggtggcagggg--tctctctgggcaggtcatctttccccagagacctagaggaagcgtagagtgccagagga----------------aggaatagcaagtgc-aaa i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35099428 579 + 104879549 GT----------------GGATAAGGAGGATTCCTCTCCCCTC--CCACCATTCCATGTG---ATGG-CAATTCCAAGCCATCCCCAGCATCCCTTATGATTTCTGGTTCTCTGGTTCACAAAGAACAAACCAGAGTGCTCACAGTGTGCCTGGAATCACACCAGGCTTGCACCTCCACTCATCCAG--TCCTGACTTCCACC-ACCTACACACAGACATCAGTCAGCGCCCTGTAAAAGATG-------------------------CTACTCATTGATGGGCATGTCTGTCCC-CGGAAACACAAGGCCcactcattcaccaaac-----------gctgggttaatgctgggt---gaagtact-gggatgcagcaggaagcaagatggaca-aatccctgccctcatggagctcacatgaa-cagggtgacaggggtgggggaga--aattaacaaacataaattgtattgggtagtaaatgctatgaagaaaaatgtagc-agagttaaatggtaggtggtgg---gggtagagaggagatgtggctatt---gtacagtggtggcaggggtctctctctgggcaggtcatctttcctcagagacctagaggaagcgtggagtgccagagga----------------aggaatagcaagtgcaaaa i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73894224 580 - 130959383 GT----------------GGATAAGGAGGCTTCCTCTCCCCTC--CCACCATTCCACGTGGCCATGG-CAATTTCAAGCCATCCCCAGTATGCCTTGTGATTTCCGGTTCTCTGGTTCACAAAGAACAAACCAGAATGCTCACGGTGTGCCTGGAATCACACCAGGCTTGCACCTTCACTCATCCAG--TCCTGGGTCCCACC-ACCCACACACAGACATCAGTCAGTGCCCTGTAAAAGATG-------------------------CTACTCATTGGTAGGCATGTCTGTCCC-CGGAAACACAAGGCCcattcattcgccaaac-----------gctgggtgaatgctgggt---gaagtact-gggatgcagcaggaagcaagatggaca-aatccctgccctcatggagctcacatgaa-cagggtgacaggggtgggggaga--aataaacaaacataaactgtattgggtagtaagtgctatgaagaaaaatgtggcaagagttaaatggtaggtggtcg---gggtggagaggagatgtggctact---gtacagtggtggcagggg--tctctctgggcaggtcatctttccccagagacctagagaaagtgtggagtgccagagga----------------aggaatagcaagtgc-aaa i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75454861 580 - 133195287 GT----------------GGATAAGGAGGCTTCCTCTCCCCTC--CCACCATTCCACGTGGCCATGG-CAATTTCAAGCCATCCCCAGTATGCCTTGTGATTTCTGGTTCTCTGGTTCACAAAGAACAAACCAGAATGCTCACGGTGTGCCTGGAATCACACCAGGCTTGCACCTTCACTCATCCAG--TCCTGGGTCCCACC-ACCCACACACAGACATCAGTCAGTGCCCTGTAAAAGATG-------------------------CTACTCATTGGTAGGCATGTCTGTCCC-CGGAAACACAAGGCCcattcattcgccaaac-----------gctgggtgaatgctgggt---gaagtact-gggatgcagcaggaagcaagatggaca-aatccctgccctcatggagctcacatgaa-cagggtgacaggggtgggggaga--aataaacaaacataaactgtattgggtagtaagtgctatgaagaaaaatgtggcaagagttaaatggtaggtggtcg---gggtggagaggagatgtggctact---gtacagtggtggcagggg--tctctctgggcaggtcatctttccccagagacctagagaaagtgtggagtgccagagga----------------aggaatagcaagtgc-aaa i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73318181 590 - 125196307 GT----------------GGATAAGAAggcttcctctcccctc--ccaccaTTCCACATGGCCATGG-CAATTTCAAGCCATCCCCAGTATGCCTTGTGATTTCCGTTTCTCTGGTTCACAAAGAACAAACCAGAATGCTCACAGTGTGCCTGGAATCACACCAGGCTTGCACCTCCACTCATCCAG--TCCTGGCTCCCACC-ACCCACACACAGACATCAGTCAGTGCCCTGTAAAAGATG-------------------------CTACTCATTGGTGGGCATGTCTGTCCC-CGGAAACACAAGGCCCATTCATTCACCAAACgctgggtgaatgctgggtgaatgctgggt---gaaGTACT-GGGATGCAGCAGGAAGCAAGATGGaca-aatccctgccctcatggagctcacatgAA-CAGGGTGACAGGGGTGggggaga--aataaataaacataaactgTATTGGGtagtaagtgctatgaagaaaaatgtggC-AGAGTTAAATGGTaggtggtgg---gggtggagaggagaTGTGGCTACT---GTACAGTGGTGGCAGGGG--TCTCTCTGGGCAGGTCATCTTTCCCCAGAGACCTAGAGGAAGTGTGGAGTGCTAGAGGA----------------Aggaatagcaagtgc-aaa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72150941 579 - 125710982 GT----------------GGATAAGGAGGCTTCCTCTCCCCTC--CCACCATTCCACGTGGCCATGG-CAATTTCAAGCCATCCCCAGTATGCCTTGTGATTTCCGGTTCTCTGGTTCACAAAGAACAAACCAGAATGCTCACGGTGTGCCTGGAATCACACCAGGCTTGCACCTCCACTCATCCAG--TCCTGGCTCCCACC-ACCCACACACAGACATCCGTCAGTGCCCTGTAAAAGGTG-------------------------CTACTCATTGGTGGGCATGTCTGTCCC-CGGAAACACAAGGCCcatccatttgccaaac-----------gctggatgaatgctgggt---gaagtact-gggatgcatcaggaagcaagatggaca-aatccctgccctcatggagctcacatgaa-cagggtgacaggggtgggggaga--aacaaacaaacataaactgtattgggtagtaagtgctatgaagaaaaatgtggc-agagttaaatggtaggtggtgg---gggtggagaggagatgtggctact---gtacagtggtggcagggg--tctctctgggcaggtcatctttccccagagacctagaggaagtgtggagtgctagagga----------------aggaatagcaagtgc-aaa i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75610312 602 - 121768101 GTGTATTATACTCCATTAGGACAAGGAAGCCTCCTCTCCCCTC--CCACCATTCCACGTGGCCATGG-CAATTCCAAGCCATTCCCAGTAACCCTTGTGATTTCCGGTTCTCTGATTCACAAAGAACAAGCCAGAGTGCTCACTGTGTGCCTGGAATCACACCAGGCTCGCCCCTCCACTCACCCAG--TTCCGG-TCTCACC-ACGTACACACAGACATGAGTCAGCGCCCTGTAAAAGATG-------------------------CTATTTGTTGGTGGGTGTGTCTGTCCC-CAGAAACACAAGgcccattcattcaccaaac----------------------gctgggt---gaagtact-gggatgcagcagaaagcaagatggaca-aatccctgccctcatgcagctcacatgaa-cagggcaatgggattgggggaga--aataaacaatcataaactgtattgggtagtaagtgctatgaaaaaaaatgcggc-agggttaaatggtaggtggtgg---gggtggagaggagatgtggctgtcgtggtacagtggtggcagggg--tctctctgggcaggtcatctttccacagagacctggaggaagtgtggagtgctagagaaagactgctctaggcagaggaatagcaagtgc-aaa i calJac3.chr12 C 0 C 0 s canFam3.chr4 27765875 631 + 88276631 ----------------AAAAAAAAAAAGGCCCCCTTTGCCCTCTTCCATCATTCTGTCTGGCCATGGCCAACTCCCATCCATCGCTGGCCTTCCTTGC-AGGTCTCATGTTCTGAGTCACATGGAACAAGCCAGAGCACTTGCTGTGTGCCTGGCACACCTCCAGCC---CGCCCCGACCTCCTCAGCATCCTCACTACCACCTACCTACACACGGGCACCAGTCAGCACACCTCAAGAGATGGAGCGAGGGCGCTCCGCACTAGGCACCACCCCTTGGTAGGCATGTCTGCCCTGGGGAAACACAGAGCCAattcattcaccagcc-----------tctcagcgagcgctgtgctaggaggtcctgggggtgcagcagaggatgaga--gacagagtcccggctctcatggagctcacaggagccagggtggaagaagaggactaaaccaataaacaaatgcaaactacatcaagtcagaaatgctatgaagaaaaatacagc-atagtaaaacagagggcgggtgacagggtggggtggagaggtggctattgtggtacaat-gtgggggggc--tctctctg---aggtgacatttgaacagagacctgaaggaagtgcagagtgctgaaaaaagattgtttcagggagaggaagagcaagtgc-aaa i canFam3.chr4 I 268 C 0 e mm10.chr14 24208470 2502 + 124902244 I a score=3960931.000000 s hg38.chr10_KI270825v1_alt 117951 1335 + 188315 ggccctggggccaccccatgcggggagacctgtctgctgtgggtggagggacctggaggag-----------------gatgcagatgaggtcacaggggcaataggacagctccaggcagaaccttatgggccacacagaggatgcagggctttattcagagtgagacgggaaaactctggaaggttctgagtagaggaaagccatgatctgacttacatctacttaggctcattagatgatttgttgaatgttgtccacaagcagggaagcatagaaacaagtcagacagcaaactcgcaagtccaggggagcaatgctgggggtctggaccagagtgacaagaatggtgttggtgagaagtagctggatttgagggatattttggagcttttctttctttcctattccacatttggcttggagcagagctgaaaggatctgctcataggcccaatgtggaataggaaagaaagaaaagtcaaggatgactccagggttcttggcctggaaactggaaggatgatgttggtccttgctgaaagggggaagcctgcaggaaaaacagatgggggagggagttggggaatcatgagttcccgcggggcctggtcatgcgtgaggtgcctacagacacacaagggaggtgtcaggcaggcagatggatgtacaggcctcaagttcactgacaaggtcatggctagagatgtaatctgagaattgtcagc------------------------------------------------------------atatgcttagtatttaaagtgatgagccttgataaaatcacccaaggaaggagtacagacagcaagggcagtggagaggtccaaggaatgaacctgagcatgcaggggctaagggaagagaagagaaatcaaccaa---gaagacagaggagaagtgg---gtagtgagatgggagAGTCGACCACACAAGTAAAGAAACTGAACACAgccgggtgcagtggctcacacctgtaatcctagcactttgggaggccaagacgggtggatcacctgaggtcagggtttcaggacc------agcctggccaacaca-gtgaaaccccgcctctactaaaaatacaaaaa-----------------------------------------------ttagccggccatggtggcgcatgcctgtaatcccagctactcaggaggctggggcaagagaattgcttgaaccca------ggaggcggaggttgcagtgagctgagattgcaccactgcactccaacctgggcaacagagtgagactccatctcaaaaaataaataa----aaacaaacaaacaaaCAAACTGAACACAACTGCATGTGGTCAGGTCTTAAGAGAGGTGCTCAGATATGCCCATGTTGCTTAATGGTGAAGGTAAGACAGACACACAATCCTCCCGACTCCTGATCAAG s panTro4.chr10 76495390 1341 + 133524379 ggccctggggccaccccatgcggggagacctgtctgctgtgggtggagggacctggaggag-----------------gatgcagatgaggtcacaggggcaataggacagctccaggcagaaccttatgggccacacagaggatacagggctttattcagagtgagatgggaaacctctggaaggttctgagtagaggaaagccatgatctgacttacatctacttaggctcattagatgatttgttgaatgttgtccacaagcagggaagcatagaaacaagtcagacagcaaactcgcaagtccaggggagcaatgctgggggtctggaccagagtgacaagaatggtgttggtgagaagtagctggatttgagggatattttggagcttttctttctttcctattccacatttggcttggagcagagctgaaaggatctgctcataggcccaatgtggaataggaaagaaagaaaagtcaaggatgactccagggttcttggcctggaaactgcaaggatgatgttggtccttgctgaaagggggaagcctgcaggaaaaacagatgggggagggagttggggaatcatgagttcccgcggggcctggtcatgcgtgaggtgcctatagacacacaaaggaggtgtcaggcaggcagatggatgtacaggcctcaagttcactgacaaggtcatggctagagatgtaatctgagaattgtcagc------------------------------------------------------------atatgcttagtatttaaagtgatgagccttgataaaatcacccaaggaaggagtacagacagcaagggcagtggagaggtccaaggaattaacctgagcatgcaggggctaagggatgagaagagaaatcaaccaa---gaagacagaggagaagtgg---gtagtgagatgggagAGTCGACCACACAAGTAAAGAAACTGAACACAgccgggtgcagtggctcacacctgtaatcctagcactttgggaggccaagacgggtggatcacctgaggtcagggtttcaggacctggccaggcctggccaacacaagtgaaaccccgcctctactaaaaatacaaaaa-----------------------------------------------ttagctggccatggtggcgcatgcctgtaatcccagctactcaggaggctggggcaagagaattgcttgaaccca------ggaagcggaggttgcagtgagctgagattgcaccactgcactccaacctgggcaacagagtgagactccgtctcaaaaaataaataa----aaacaaacaaacaaacaaacTGAACACAACTGCATGTGGTCAGGTCTTA-GAGAGGTGCTCAGATAGGCCCATGTTGCTTAATGGTGAAGGTAAGACAGACACACAATCCTCCCGACTCCTGATCAAG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76157619 1331 - 133410057 ggccttggggccaccccatgcggggagacctgtctgctgtgggtggagggacctgcaggag-----------------gatgcagatgaggtcacaggggcaacaggacagctccaggcaggaccttatgggccacagagaggatgcagggctttactcagagtgagatgggaaacctctggaaggttctgagtagaggaaagccatgatctgacttacatctacttaggctcattagatgatttgtcgaatgttgtccataagcagggaagcatagaaacaagtcagacagcaaactcgcaagtccacgggagcaatgctgggggtctggaccagggtgacaagaatggcgttggtgagaagtagctggatttgagggatattttggagcttttctttctttcctattccacatttggcttggagcagagctgaaaggatctgttcacaggcccaatgtggaataggaaagaaagaaaagtcaaggatgactccagggttcttggcctggaaactggaaggatgatattggtccttgctgaaagggggaagcctgcaggagaaacagatgggggagggagttggggaatcacgagttcccgcggggcctggtcatgcgtgaggtgcctacagacacacaagggaggtgtcaggcaggcagatggatgtacaggcctcaagttcagtgacaaggtcatggctagagatgtaatctgagaattgtcagc------------------------------------------------------------atatgcttagtatttaaagtgatgagccttgataaaatcacccaaggaaggagtacagacaggaaaggcagtggagaggtccaaggaatgaacctgagcatgcaggggctaagggatgagaagaggaatcaaccaa---gaagaca---gagaagtgg---gtcgtgagatgggagAGTCGACCACACAAGTAAAGAAACTGAACACagccgagtgcggtggctcacacctgtaatcctagcactttgggaggccaagacgggtggatcacctaaggtcagggtttcaggacc------agcctagccaacaca-gtgaaaccccgcctctactaaaaatacaaaaa-----------------------------------------------ttagccggccatggtggcacatgcctataatcccagctactcaggaggctggggcaggacaattgcttaaaccca------ggaggcggaggttgcagtgagctgagattgcaccactgcactccaacctgggcaacagagcgagaatctgtctcaaaaaataaataa----aaacaaacaaacaaacaaacTGAACACAACTGCATGTGGTCAGGTCTTA-GACAGGTGCTCAGATATGCCCATGTTGCTTAATGGTGAAGGTAAGACAGACACACAATCCTCCCGACTCCTGATCAAG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35100007 1347 + 104879549 ggccctggggccaccccatgcagggagatctgtctgctgtgggtggagggacctgcaccagagacagtactggtcacaggggcagatgaggtcacaggggcaacaggacagctccaggcagaaccttatgggccacacagaggatgcagggctttactcagagtgagatgggaaacctctggaagattctgagtagaggaaagccatgatctgacttacatctacttaggctcattagatgatttgctgagtgttgtccataagcggggaagcacagaaacaagtcagacagcaaactcgcaagtccagggaagcaatgctgggggtctggaccagggtgacaagaatggcatcggtgagaagtagctggatttgagggatattttggagctcttctttctttcctattccacatttggcttggagcagagctgaaaggatctgctcacaggcccaatgtggaataggaaagaaagaaaagtcaaggacgactccagggttcttggcctggaaactggaaggatgatgttggtccttgctgaaagggggaagcctgcaggagaaacagatgggggagggagttaaggaatcacgagttcccgcggggcctggtcatgcgtgaggtgcctacagacacacaagggagatgtcaggcaggcagatggatgtacaggcctcaagttcagtgacaaggtcatggctagagatgtaatctgagaattgtcagc------------------------------------------------------------atatgctttgtatttgaagtgatgagccttgataaaatcacccaagggaggagtacagacaggaagggcagtggagaggtccaaggaacgaatctgagcatgcaggggctaagggatgagaagagaaatcaaccaa---gacgacagaggagaagtgg---gtagtgagatgggagAGTTGACCACACAAGTAAAGAAACTGAACACAgccaggtgcggtagctcacacctgtaatcctagcactttgggaggccaagacgggcagatcacctgaggtcagggtttcaggacc------agcctggtcaacacg-gtgaaaccccgcctctactaaaaatacaaaaa-----------------------------------------------ttagccggccatggtggtgcatgcctgtaatcccagctactcaggaggctggagcaagagaattgcttgaaccca------ggaggcagaggttgcagtgagccgagattgcaccactgcactccaacctgggcaacagagcaagactccgtctcaaaaaataaataa--------aaataaacaaacaaaCTGAACACAACTGCATGTGGCCAGGTCTTA-GAGAGGTGCTCAGATATGCCCATGTTTCTTAATGGTGAAGGTAAGACAGACACACCATCCTCCCGACTCCTGATGAAG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73894804 1340 - 130959383 ggccctggggccaccccatgcggggagacctgtctgctgcgggtggagggacctgcaggaa-----------------gatacagatgaggtcagaggggcaacgggacagctccaggcaggaccttatgggccacagagaggaagcagggctttactcagagtgagatgggaaacctctggaagattctgagtagaggacagccatgatctgacttacatctacctaggctcattagatgctttgttgaatgttgtccataagcagggaagcatagaaacaactcagacagcaaactcacaagtccaggggagcaatgctgggggcttggaccagggtgacaagaatggtgttggtgacaagtagctggatttgagggatattgtggagcttttctttctttcctactccacatttggcttggagcagagctgaaaggatctgctcacaggcccaatgtggaatcggtaagaaagaaaagtcaaggatgactccaggattcttggcctggaaactggaagaatgaagttggtccttgctgaaagggggaagcctgcaagaggaacggat-ggggagggagttggggaatcacgagttcccgccgggcctggttacacgtgaggtgcctacagacacacaagggaggcgtcaggaaggcagatggatgtacaggcctcaagttcagtgacaaggtcatgactaaagatataatctgagaattgtcagc------------------------------------------------------------atatgcttagtatttcaagtgatgggtcttgataaaatcacccaaggaagaagtacggacaggaagggcagtggagaggtccaaggaatgaacctgagcatccaggggctaaaggatgggaagagaaatcaaccaa---gaagacagaggagaagtgggtagtagtgaggtgggagAGTCGACCACACAAGTAAAGAAACTGAACACAgccgggtgcagtggctcacgcctgtaatcctagcactctgggaggccaaggcgggcggatcacctgaggtcagggtttcagtacc------agcctagtcaacatg-gtaaaactccacctctactaaaaatacaaaaa-----------------------------------------------ttagccgggcatggtggtgcatgcctgtaatcccagctacttgggaggctggggcaggagaactgcttgaaccca------ggaggtggaggttgcagtgagccgagattgcaccactgcactccaacgtgggcaacagaatgagactccatctcaaaaaataaataaaaataaataaacaaaCAAACAAACTGAACACAACTGCATGTGGTCAGGGCTCG-GAGAGGTGCTCAGATATGTCCATGTTGCTTAATGGTGAAAGTAAGAGAGAGACACAATCCTCCCGACTCCTGATCAAG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75455441 1336 - 133195287 ggccctggggccaccccatgcggggagacctgtctgctgcgggtggagggacctgcaggaa-----------------gatacagatgaggtcagaggggcaacgggacagctccaggcaggaccttatgggccacagagaggaagcagggctttactcagagtgagatgggaaacctctggaagattctgagtagaggacagccatgatctgacttacatctacctaggctcattagatgctttgttgaatgttgtccataagcagggaagcatagaaacaactcagacagcaaactcacaagtccaggggagcaatgctgggggcttggaccagggtgacaagaatggtgttggtgacaagtagctggatttgagggatattgtggagcttttctttctttcctactccacatttggcttggagcagagctgaaaggatctgctcacaggcccaatgtggaatcggtaagaaagaaaagtcaaggatgactccaggattcttggcctggaaactggaagaatgaagttggtccttgctgaaagggggaagcctgcaagaggaacggat-ggggagggagttggggaatcacgagttcccgccgggcctggttacacgtgaggtgcctacagacacacaagggaggcgtcaggaaggcagatggatgtacaggcctcaagttcagtgacaaggtcatgactagagatataatctgagaattgtcagc------------------------------------------------------------atatgcttagtatttcaagtgatgggtcttgataaaatcacccaaggaagaagtacggacaggaagggcagtggagaggtccaaggaatgaacctgagcatccaggggctaaaggatgggaagagaaatcaaccaa---gaagacagaggagaagtgggtagtagtgaggtgggagagtcgaccacacaagtaaagaaactgaacacagccgggtgcagtggctcacgcctgtaatcctagcactctgggaggccaaggcgggcagatcacctgaggtcagggtttcaggacc------agcctggtcaacatg-gtaaaactccacctctactaaaaatacaaaaa-----------------------------------------------ttagccgggcatggtggtgcatgcctgtaatcccagctacttgggaggctggggcaggagaactgcttgaaccca------ggaggtggaggttgcagtgagccgagattgcaccactgcactccaacgtgggcaacagaacgagactccatctcaaaaaataaataa----aaataaacaaacaaacaaactgaacacaactgcatgtggtcagggctca-gagaggtgctcagatatgtccatgttgcttaatggtgaaagtaagagagagacACAATCCTCCCGACTCCTGATCAAG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73318771 1342 - 125196307 ggccctggggccaCCCCATGCGGGGAGACCTGTCTGCTGTGGGTGGAAGGACCTGCAGGAA-----------------GATGCAGATGAGGTCAGAGGGGCAACGGGACAGCTCCAGGCAGGACCTTATGGGCCACAGAGAGGAAGCAGGGCTTTACTCAGAGTGAGATGGGAAACCTCTGGAAGATTCTGAGTAGAGGAAAGCCATGATCTGACTTACATCTACCTAGGCTCATTAGATGCTTTGTTGAATGTTGTCCATAAGCAGGGAAGCATAGAAACAACTCAGACAGCAAACTCACAAGTCCAGAGGAGCAATGCTGGGGGCTTGGACCAGGGTGACAAGAATGGTGTTGGTGACAAGTAGCTGGATTTGAGGGATATTGtggagcttttctttctttcctactccACATTTGGCTTGGAGCAGAGCTGAAAGGATCTGCTCACAGGCCCAATGTGGAAtcggaaagaaagaaaagtcaaggatgactccaggATTCTTGGCCTGGAAACTGGAAGGATGAAGTTGGTCCTTGCTGAAAGGGGGAAGCCTGCAAGAGGAACGGAT-GGGGAGGGAGTTGGGGAATCACGAGTTCCCGCCGGGCCTGGTTACACGTGAGGTGCCTACAGACACACAAGGGAGGCGTCAGGAAGGCAGATGGATGTACAGGCCTCAAGTTCAGTGACAAGGTCATGACTAGAGATATAATCTGAGAATTGTTAGC------------------------------------------------------------ATATGCTTAGTATTTCAAGTGATGGGCCTTGATAAAATCACCCAAGGAAGAAGTACGGACAGGAAGGGCAGTGGAGAGGTCCAAGGAATGAACCTGAGCATCCAGGGGCTAAGGGATGAGAAGAGAAATCAACCAA---GAAGACAGAGGAGAAGTGGGTAGTAGTGAGGTGGGAGAGTCGACCACACAAGTAAAGAAACTGAacacagccgggtgcagtggctcacgcctataatcctagcactctgggaggccaaggcgggcggatcacctgaggtcagggtttcaggacc------agcctggtcaacatg-gtaaaactccacctctactaaaaatacaaaaa-----------------------------------------------ttagccgggcatggtggtgcatgcctgtaatcccagctacttgggaggctggggcaggagaactgcttgaacccaggaggtggaggtggaggttgcagtgagccaagattgcaccactgcactcccatgtgggcaacagaacgagactccatctcaaaaaataaataa----aaataaataaacaaacaaactgaacACAACTGCATGTGGTCAGGGCTCA-GAGAGGTGCTCAGATATGTCCATGTTGCTTAATGGTGAAGGTAAGAGAGAGACACAATCCTCCCGACTCCTGATCAAG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72151520 1337 - 125710982 ggccctggggccaccccatgcggggagacctgtctgctgcaggtggagggacctgcaggaa-----------------gatgcagatgaggtcagaggggcaacgggacagctccaggcaggaccttatgggccacagagaggaagcagggctttactcagagtgagatgggaaacctctggaagattctgagtagaggaaagccatgatctgacttacatctacctaggttcattagatgctttgttgaatgttgtccataagcagggaagcatagaaacaactcagacagcaaactcacaagtccaggggagcaatgctgggggcttggaccagggtgacaagaatggtgttggtgacaagtagctggatttgagggatattgtggagcttttctttctttcctactccacatttggcttggagcagagctgaa---atctgctcacaggcccaatgtggaatcggaaagaaagaaaagtcaaggatgactccaggattcttggcctggaaactggaaggatgaagttggtccttgctgaaagggggaagcctgcaagaggaacggat-ggggagggagttggggaatcacgagttcccgccgggcctggtcacacgtgaggtgcctacagacacacaagggaggcgtcaggaaggcagatggatgtacaggcctcaagttcagtgacaaggtcatgactagagatataatctgagaattgtcagc------------------------------------------------------------atatgcttagtatttcaagtgatgggccttgataaaatcacccaaggaagaagttcggacaggaagagcagtggagagttccaaggaatgaacctgagcatccaggggctaagggatgagaagagaaatcaaccaa---gaagacagaggagaagtgggtagtagtgaggtgggagAGTCGACCACACAAGTAAAGAAACTGAACACAgccgggtgcagtggctcacgcctgtaatcctagcactctgggaggccaaagcgggcggatcacctgaggtcagggtttcaggacc------agcctggtcaacatg-gaaaaactccgcctctactaaaaatacaaaaa-----------------------------------------------ttagccgggcatggtggtgcatgcctataatcccagctacttgggaggctggggcaggagaactgcttgaaccca------ggaggtggaggttgcagtgagtcgagattgcaccactgcactccaacgtgggcaacagaacgagactccatctcaaaaaataaataaaaataaataaacaaaCAAACAAACTGAACACAACTGCATGTGGTCAGGGCTCA-GAGAGGTGCTCAGATATGTCCATGTTGCTTAATGGTGAAGGTAAGAGAGAGACACAATCCTCCCGACTCCTGATCAAG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75610914 1417 - 121768101 ggccctggggcctgcccatgca-ggaggcctgcatgctgtgggtggagtgacctgcaggaa-----------------aatgcagatgaggtcagaggagcaacatgacagctccaggcaggagtgtagcggccacagagaggattcagggcttta-tcagagtgagatgggaaacctctagaag-ctctgaatagaggaaacacatggt----cttacatctacccaggctcattagatgctttgttgaaagctgtccataagcagggaagcatggaaacaaatcagacagcaaactcccaagtccaggggagcaatggtgagggcttggaccagggtggcaagaatggtgctggtgagaagtggctggatttgagggatattttggagattttctttctttcctattccacatttggcttggagcagagctgaaaggatttgctcacaggccaaatgtggaataggaaaaaaagaaaagtcaaggatgactccagggttcttggcctggaaagcggcaggatgaagttggtccctgctgaaagggagaagcctgcaggaggaacagatgggggagggagggagggaatcacgagttcccattgggcctgctcacgagtgaggtgcctacagacacacaagggaggtgtcaggcaggcagat-gatgtacaggcctcaagttcagagacaaggtcatggctagagatataatctgagaattgtcagcatatgcttagtatttattcttatttttatttttttattttgctacaaagacatgtccaaaatatgcttagtatttaaagtgatgagccttgataggatcacccaaggaaggagtacagataggaagggcagtggagaggtccaaggaaagaacctgagcatccaggggctgagggaaaagatgagaaatcaaccaagacgacgacagaggatacgtgg---gtagtgaggtaggagAGTCGATCCCTTGAGTAAAGAAACTGAACACggccgggcatggtggctcacgcctgtaatcctagcactttgggatgccaaggcaggcagatcacctgaggtcaggggttcgggatc------agcctagccaacatg-gagaaaccccatttctactaaaagtacaaaaattctccagtaacagtttgaacgtaaaattaaaaatatatatacaaatttagacaggcatggtggtgtatgcctataatcccagctactcaggaggctgaggcaggaaaatcacttgaaccca------ggaggtggaggttgcagtgagccaagctcgcaccactgcactcccacctgggcacc--------actccatctcaaaacataaataa----at-----------aagaaACTGAACACAACTGCATGTGGCCAGGGATGA-GGGAGGTGCGCAGATATGCCCACATTGCTTAACAGTGAAGGTAAGACAGACATACAATCCTCTTGACTCCTGATCAAG i calJac3.chr12 C 0 C 0 e canFam3.chr4 27766506 0 + 88276631 C e mm10.chr14 24208470 2502 + 124902244 I a score=957264.000000 s hg38.chr10_KI270825v1_alt 119286 296 + 188315 CTGAATCTGCACTCCACCTACCCCCTGAACTTCCCCAGTTATCAAGGAGGCTGATGGAAATGAGGCAGAGCATTAGGGAGACCCTTCAGTGTATACTAGGCATCCTACATGGCACAGCTCATGTTTTTGTTG-------------TTACACT----CTACTCATATCaggtaacatttattgagtacttgttgcaagaaaggcactatttgtatggattatttcatttaattctcccaacaatcctacaaggtgggccactatcaactcaccttctagatgaagaaatgta--------------ggctcagagaagccaagtaact s panTro4.chr10 76496731 296 + 133524379 CTGAATCTGCACTCCACCTACCCCCTGAACTTCTCCAGTTATCAAGGAGGCTGATGGAAATGAGGCAGAGCATTAGGGAGACCCTTCAGTGTATACTAGGCATCCCACATGGCACAGCTCATGTTTTTGTTG-------------TTACACT----CTACTCATATCaggtaacatttattgagtacttgttgcaagaaaggtactatttgtatggattatttcatttaattctcccaacaatcctacaaggtgggccactatcaactcaccttctagatgaagaaatgta--------------ggctcagagaagccaagtaact i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76158950 296 - 133410057 CTGAATCTGCACTCCACCTACCCCCTGAACTTCCCCAGTTATCAAGGAGGCTGATGGAAATGAGGCAGAGCATTAGGGAGACCCTTCAATGTATACTAGGCATCCTACATGGCACAGCTTATGTTTTTGTTG-------------TTACACT----CTACTCATATCaggtaacatttattgagtacttgttgcaggaaaggcactatttgtatggattatttcatttaattctcctaacaatcctacaagatgggccactatcaactcaccttctagatgaagaaatgta--------------ggctcagagaagccaagtaact i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35101354 290 + 104879549 CTGAATCTGCACTCCACCTA-CCCCTGAACTTCCCCAGTTATCAAGGAGGCTGATGGAAATGAGGCAGAGCATTAGGGAGACCCTTCAATGTATACTAGGCATCCTACATGGCACAACTCATGTTTTTGTTG-------------TTAC---------ACTCATATCAGGTaacatttattgagtacttgttgcaggaaaggcactatttgtatggattacttcatttaattctcctaacaatcctacaagatgggccactatcaactcaccttctagatgaagaaatgta--------------ggctcagagaagccaagtaact i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73896144 302 - 130959383 CTGAATCTGCACTCCACCTACCCCCTGAACTTCCCCAGTTATCAAGGAGGCTGACGGAAATGAGGCAAAGCATTAGGGAGAGCCTTCAATGTCTACTAGGCATCCTACATGTCACAGCTCATGTTTTTGTTGAATGTACC----AGTACACT----CTACTCACATCAGGTaacgtttattgagcacttgttacaggaaaggcactatttgtatggattatttcatttaattctcctagcaatcctacaagatgggccactatcaactcaccttctagat---gaaatgta--------------ggctcagagaagccaagtaact i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75456777 302 - 133195287 CTGAATCTGCACTCCACCTACCCCCTGAACTTCCCCAGTTATCAAGGAGGCTGACGGAAATGAGGCAAAGCATTAGGGAGAGCCTTCAATGTCTACTAGGCATCCTACATGTCACAGCTCATGTTTTTGTTGAATGTACC----AGTACACT----CTACTCACATCAGGTaacgtttattgagcacttgttacaggaaaggcactatttgtatggattatttcatttaattctcctagcaatcctacaagatgggccactatcaactcaccttctagat---gaaatgta--------------ggctcagagaagccaagtaact i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73320113 302 - 125196307 CTGAATCTGCACTCCACCTACCCCCTGAACTTCCCCAGTTATCAAGGAGGCTGACGGAAATGAGGCAGAGCATTAGGGAGAGCCTTCAATGTCTACTAGGCATCCTACATGTCACAGCTCATGTTTTTGTTGAATGTACC----AGTACACT----CTACTCACATCAGGTaacgtttattgagcacttgttgCAGGAAAGGCACGATTtgtatggattatttcatttaattctcctaGCAATCCTACAAGATGGGCCACTATCAACTCACCTTCTAGAT---GAAATGTA--------------GGCTCAGAGAAgccaagtaact i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72152857 302 - 125710982 CTGAATCTGCACTCCACCTACCCCCTGAACTTCCCCAGTTATCAAGGAGGCTGACGGAAATGAGGCAGAGCATTAGGGAGAGCCTTCAATGTCTACTAGGCATCCTACATGTCACAGCTCATGTTTTTGTTGAATGTACC----AGTACACT----CTACTCACATCaggtaacgtttattgagcacttgttgcaggaaaggcacgatttgtatggattatttcatttaattctcctagcaatcctacaagatgggccactatcaactcaccttctagat---gaaatgta--------------ggctcagagaagccaagtaact i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75612331 298 - 121768101 CTGAATCTGCACTCCACCTACCCCC-GAACGTCCCCAGTTATCAAGGAGGCTGATGGAAACGAGGCAGAGC-TTACGGAGAGCCTTCAATGTATACTAGGCATCCTACATGTCACAGCTCATGTTTCTGTTGAATGTAC---------CACT----ATACTAACATCaggtaacatttattgagtacttgttgcaggaaaggcattattaatatggactatttcatttaattctcctaacagcccttcaagatgggccactatcaactcatcttctagaggaagaaatgta--------------ggctcagataagccaaccaact i calJac3.chr12 C 0 C 0 s canFam3.chr4 27766506 312 + 88276631 CTGTACCTGCACTCCACCTCCTCCCTG----------GGGATCAAAGGGACTGATGGAAACATGTCAGAGGGACAGGGAAAGCCACCAAGAAGCACGAGGCACCTTACAGGTTTGGGCTCAAGCTTTTCTTGAGAGTACTAACAACCACACTCTGACTGCTCatagcggctaatatttattaagtacttgtcacgacgaaggtactatttatatggcttgtttcatttaatcatcccaacact-gtgaaaaatgg---attcttaacttgttttctaaatggtgagaTGCATggggcacctgggtggcccagat-ggttaagtatct i canFam3.chr4 C 0 I 224 e mm10.chr14 24208470 2502 + 124902244 I a score=810105.000000 s hg38.chr10_KI270825v1_alt 119582 294 + 188315 tgcccaaggccacaaagctagtaagcagagggtcccaactcaagCAGGACTCTCATCCACTAACCCTAGACCtttt-----------------------------tttttttttttttttttt-----ttttttgagacaaagtctcactctgtcacccaggctggagtgcagtggtgtgatctcagctcactgcaaccttcatctcccgggtccaagtgatt---ctcctgcctcagcctcctgagtagctggggttacaggcatgtgcctctgtgcctggctaatttttgtatttttagtggagatgggatttcaccatgttggccagg s panTro4.chr10 76497027 289 + 133524379 tgcccaaggccacaaagctagtaagcagagggtcccaactcaagCAGGACTCTCATCCACTAACCCTAGACCtttt-----------------------------tttttttttttttttttt-----t-----gagacaaagtctcactctgtcacccaggctggagtgcagtggtgtgatctcagctcactgcaaccttcatctcctgggtccaagtgatt---ctcctgcctcagcctcctgagtagctggggttacaggcatgtgcctctgagcctggctaatttttgtatttttagtagagatgggatttcaccatgttggccagg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76159246 277 - 133410057 tgcccaaggccacaaagctagtaagcagagggtcccaactcaagCAGGACTCTCATCCACTAACCCTAGACCTCCt-----------------------------ttttttt----------------------gagacaaagtcttgctctgtcacccaggctggagtgcagtggtgtgatctcagctcactgcaaccttcatctcctgggtccaagtgatt---ctcctgcctcagcctcctgagtagctggggttacaggcatgtgcctctgtgcctggctaatttttgtatttttagtagagatgggatttcaccacgttggccagg i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35101644 285 + 104879549 tgcccaaggccacaaagctagtaagcagagggtcccaactcaagcagGACTCTCATCCACTAACCCTAGACCTCCt-----------------------------tcttttttttttttt--------------gagacaaagtctcgctctgtcacccaggctgaagtgcagtgttgtgatctcagctcactgcaaccttcatctcccgggttcaagtgatt---ctcctgcctcagcctcctgtgcagctggggttacaggcatgtgcctctacgcctggctcatttttgtatttttagtagagatgggatttcaccacgttggccagg i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73896446 288 - 130959383 tgcccaaggccacaaagctagtaagcagagggtcccaactcaagcagGACTCTCATCCACTAACCCTAGACCTCCt-----------------------------tttttgttgttgttttttg----ttttttgagacagggtctcgctctgtcacccaggctggagtgca------tgatttcgggtcactgcaaccttcatctcccgggttcaagtgatt---ctcctgcctcagcctcctgagtagctggggttacaggcatgtgcctctgcgcctggctaatttttgta-ttttagtagagatgggatttcaccatgttggtcagg i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75457079 288 - 133195287 tgcccaaggccacaaagctagtaagcagagggtcccaactcaagcagGACTCTCATCCACTAACCCTAGACCTCCt-----------------------------tttttgttgttgttttttg----ttttttgagacagggtctcgctctgtcacccaggctggagtgca------tgatttcggctcactgcaaccttcatctcccgggttcaagtgatt---ctcctgcctcagcctcctgagtagctggggttacaggcatgtgcctctgcgcctggctaatttttgta-ttttagtagagatgggatttcaccatgttggtcagg i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73320415 288 - 125196307 tgcccaagaccacaaaGCTAGTAAGCAGAAGGTTCCAACTCAAGCAGGACTCTCATCCACTAACCCTAGacctcct-----------------------------tttttgttgttgttttttg----ttttttgagacagggtcttgctctgtcacccaggctggagtgca------tgatttcggctcactgcaaccttcatctcctgggttcaagtgatt---cttctgcctcagcctcctgagtagctggggttataggtatgtgcctctgcgcctggctaatttttgta-ttttagtagagatgggatttcaccatgttggtcagg i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72153159 288 - 125710982 tgcccaagaccacaaagctagtaagcagagggtctcaactcaagcAGGACTCTCATCCACTAACCCTAGACCTCCt-----------------------------tttttgttgttgttttttg----ttttttgagacagggtctcgctctgtcacccaggctggagtgca------tgatttcggctcactgcaaccttcatctcccgggttcaagtgatt---ctcctgcctcagcctcctgagtagctagggttacaggcatgtgcctctgcgcctggctaatttttgta-ttttagtagagatgggatttcaccatgttggtcagg i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75612629 328 - 121768101 tgccccaggccacaaagctaataagcagagggtcccaattcaagcaggactctca-ccgctaaccctagagctcctctggtggtttttccttgttgttgttgttgttgttcttgttgttgttTGGGttttttttgagacaaagtatcactctttcacccaggctggagtgcagtggcgtgatctcagctcactgcaaccttcatctcctggattcaagcgattctcctcctgcctcagcctcccaagtagctgggaatataggcacgtgccactgcccctggctaattttcgtatttttagtagagac--gattccaccatgttagccaga i calJac3.chr12 C 0 C 0 e canFam3.chr4 27766818 224 + 88276631 I e mm10.chr14 24208470 2502 + 124902244 I a score=1254017.000000 s hg38.chr10_KI270825v1_alt 119876 358 + 188315 ctagtcttgaactcctgaccAGACCTCCTCCTTTCTGACAAGATCAGAAAAAGTGATACTCACT---AGTTCCTTCTCCCACTGGATAGAAAAAGATGCAAGCAGGCATCCCTCGCCCAGTGTCAACACTCAGGGAAC-----------------AGGAG-----ATACCTAGTAATCACTACTGGCAGGTCAGGAGCTCTTCTCCAA-GCAGGCATGCTATCTCGTGGCCAGCATGCAGCACTGTGGCCAAGGCCATCTTTCCAACAGAAGGA---AAAAAGGGAAGCATGAGAAAGAAGGGTTCCAGTCACCTCTGTCACAGCTCAGCTGCCAGCCTTGTCCTCTAGTCCTGGCTTCAACCTCTCTGGCCTTGTCACTCCTCTGG s panTro4.chr10 76497316 358 + 133524379 ctagtcttgaactcctgaccAGACCTCCTCCTTTCTGACAAGATCAGAAAAAGTGATACTCACT---AGTTCCTTGTCCCACTGGATAGAAAAAGATGCAAGCAGGCATCCCTCACCCAGTGTCAACACTCAGGGAAC-----------------AGGAG-----ATACCTAGTAATCACTACTGGCAGGTCAGTAGCTCTTCTCCAA-GCAGGCATGCTATCTCGTGGCCAGCATGCAGCACTGTGGCCAAGGCCATCTTTCCAACAGAAGGA---AAAAAGGGAAGCATGAGAAAGAAGGGTTCCAGTCACCTCTGTCACAGCTCAGCTGCCAGCCTTGTCCTCTAGTCCTGGCTTCAACCTCTCTGGCCTTGTCACTCCTCTGG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76159523 358 - 133410057 ctagtcttgaactcctgaccAGACCTCCTCCTTTCTGACAAGATCAGAAAAAGTGATACTCACT---AGTTCCTTGTCCCACTGGATAGAAAAAGATGCAAGCAGGCATCCCTCACCCAGTGTCAACACTCAGGGAAC-----------------AGGAG-----GTACCTAGTAATCACTACTGGCAGGTCAGTAGCTCTTCTCCAA-GCAGGCATGCTATCTCGTGGCCAGCATTCAGCACTGTGGCCAAGGCCATCTTTCCAACAGAAGGA---AAAAAGGGAAGCATGAGAAAGAAGGGTTCCAGTCACCTCTGTCACAGCTCAGCTGCCAGCCTTGTCCTCTAGTCCTGGCTTCAACCTCTCTGGCCCTGTCACTCCTCTGG i ponAbe2.chr10 C 0 I 5813 s nomLeu3.chr18 35101929 358 + 104879549 ctagtcttgaactcctgaccAGACCTCCTCCTTTCTGACAAGATCAGAAAAAGTGATACTCACT---AGTTCCTTGTCCCACTGGATAGAAAAAGATGCAAGCAGGCATCCCTCGCCCAGTGTCAACACTCAGGGAAC-----------------AGGAG-----GTACCTAGTAATCACTACTGGCAGGTCAGTAGCTCTTCTCCAA-GCAGGCGTGCTATCTCGTGGCCAGCATTCAGCACTGTGGCCAAGGCCATCTTTCCAACAGAAGGA---AAAAAGGGAAGCATGAGAAAGAAGGGTTCCAGTCACCTCTGTCACAGCTCAGCTGCCAGCCTTGTCCTCTAGTCCTGGCTTCAACCTCTCTGGCCTTGTCACTCCTCTGG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73896734 374 - 130959383 ctagtcttgaactcctgaccAGACCTCCTCCTTTCTGACAAGATCAGAAAAAGTGATACTCACT---AGTTCCTTGTCCCACTGGATAG-AAAAGATGCAAGCAGGCACCCCTCGCCCAGTGTCAACACTCAGTAATCAACAACTAGTGATTACTAGGAG-----GTACCTAGTAATCACTACTGGCAGGTCAGTAGCTCTTCTCCAA-GCAGGCGTGCTATCTCGTGGCCAGCATTCAGCACTGTGGCCAAGGCCATCTTTCCAACAGAAGGA---AAAAAGGGAAGCATGAGAAAGAAGGGTTCCAGTCACCTCTGTCACAGCTCAGCTGCCAGCCTTGTCCTCTGGTCCTGGCTTCAACCTCTCTGGTCTTGTCACTCCTCTGG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75457367 374 - 133195287 ctagtcttgaactcctgaccAGACCTCCTCCTTTCTGACAAGATCAGAAAAAGTGATACTCACT---AGTTCCTTGTCCCACTGGATAG-AAAAGATGCAAGCAGGCACCCCTCGCCCAGTGTCAACACTCAGTAATCAACAACTAGTGATTACTAGGAG-----GTACCTAGTAATCACTACTGGCAGGTCAGTAGCTCTTCTCCAA-GCAGGCGTGCTATCTCGTGGCCAGCATTCAGCACTGTGGCCAAGGCCATCTTTCCAACAGAAGGA---AAAAAGGGAAGCATGAGAAAGAAGGGTTCCAGTCACCTCTGTCACAGCTCAGCTGCCAGCCTTGTCCTCTGGTCCTGGCTTCAACCTCTCTGGTCTTGTCACTCCTCTGG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73320703 358 - 125196307 ctagtcttgaactcctgaccagaCCTCCTCCTTTCTGACAAGATCAGAAAAAGTGATACTCACT---AGTTCCTTGTCCCACTGGATAGAAAAAGATGCAAGCAGGCACCCCTCGCCCAGTGTCAACACTCAGGGAAC-----------------AGGAG-----GTACCTAGTAATCACTACTGGCAGGTCAGTAGCTCTTCTCCAA-GCAGGCGTGCTATCTCGTGGCCAGCATTCAGCACTGTGGCCAAGGCCATCTTTccaacagaagga---aaaaagggaagcaTGAGAAAGAAGGGTTCCAGTCACCTCTGTCACAGCTCAGCTGCCAGCCTTGTCCTCTGGTCCTGGCTTCAACCTCTCTGGTCTTGTCACTCCTCTGG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72153447 358 - 125710982 ctagtcttgaactcctgaccAGACCTCCTCCTTTCTGACAAGATCAGAAAAAGTGATACTCACT---AGTTCCTTGTCCCACTGGATAGAAAAAGATGCAAGCAGGCACTCCTCGCCCAGTGTCAACACTCAGGGAAC-----------------AGGAG-----GTACCTCGTAATCACTACTGGCAAGTCAGTAGCTCTTCTCCAA-ACAGGCGTGCTATCTCGTGGCCAGCATTCAGCACTGTGGCCAAGGCCATCTTTCCAACAGAAGGA---AAAAAGGGAAGCATGAGAAAGAAGGGTTCCAGTCACCTCTGTCACAGCTCAGCTGCCAGCCTTGTCCTCTGGTCCTGGCTTCAACCTCTCTGGTCTTGTCACTCCTCTGG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75612957 365 - 121768101 ctggtcttcaactcctgatcacaCCTCCTCCTTTCTGACAAAAACAGAAAAAGTGACACTCACTAGCAGTTCCTTGTCCCACTGGATAGAAAAGGATGCAAGCAGGCATCCCTTGCCCAGTGTCAACACTCAGGGAAC-----------------AGGAAGTACTGTACCTAGTAATCAATACTAGCAGGTCA-TAGCTCTTCTCCAA-GCAGGCGTGCCATCTCATGGCCAGCATTCGGCACTGTGGCCAAAGCCATCTTTCCAACAGAAGGA---AGAAAGGAAAGCATGAGAAAGAAGGGTTCCAGTTACCTCTGTCACAGCTCAGCTGCCAGCCTTCTCCTCTGGTCCTAGCTTCAAACCCTCTGCCCTTCTCACTCCTCTGG i calJac3.chr12 C 0 C 0 s canFam3.chr4 27767042 326 + 88276631 CTAGCCCTGGATTACT------------TCCTTTCCACCAAGATCAGAAGAGACAAAACTCACC---AGTTCCTTGATCCAGTGGACAGCAGAGGGTGTGAGCAGCCAACCCCTG----------------------------------------ACAAC-----ACACCTAGGAGTCACAACTGACAAGTCAGAAACTGGGGGGCAATGCCAGAGAGCAGCGTATCAGCCAGCATCTGGCACTGTGGCCAAGGTTATCCTTACAACAGCAGGAGGGAAGAAGAGAAGTAAGAGAAAT-ATGGTTCCAGTCATCTCTGCCACACCTCAGCTGCCAGCCTTGTCCTCTGCTCCTGGCTTCAACGCCCCCAACCTGGTCACTCCTCTGG i canFam3.chr4 I 224 C 0 e mm10.chr14 24208470 2502 + 124902244 I a score=3211706.000000 s hg38.chr10_KI270825v1_alt 120234 954 + 188315 CCGTGGATTTCTCTGGTCCCCCTCAGAAGAGACTAGTACTGTCTCTGGAACAAGCTAGATAAATATCTCCATCCTGGGTCTTTAGAAGGCAGCAAGAAATGGAG----TGGGCCAATGGAGTTTCAGGAAGCTGTTTATGATTCTGATGCTTAGACCAAATGCAAAAGAACTGTAAAGGTGTCCCTCCCCCACTGT-CCCTTCGTGCCACACCATCCCAT-AATGG-CATGTTCCATTAATCTCAGCTCAAGGTAAGCTGAGTCATCAGCCAGAGAAAATGATGGCTCTGGGAACTGCCCAAGTCACATGGCATGAGCTGGGCATTAGGCAAGGACATGG--CATCCCAGGCTTCACAGGTCGGGGACATTCTGTCCACAAAGGCCAAAGAGGGCAACTACAAAGGAAAAGTCTTA-TCTAAGACATCAGCAAACGGGTGCTGTTTCTGCCCCCTCTTTCTTCAATGTCATCTACACTGCCCTCCTCATCTACTTCGTGGGCTGCATTGAGAATCACTGACCACCAAGGCAACTCAGCCTGGGTCTGTAGTAGCAGCAACTAGGGCTCCTGAGGTCATGGAGAACCCCTTGCCCAC-------CACAATATTCCTGCTGAGTTTGAACTCGTCAGGACCCCTGCCATAGGGCGGGAGGCACAAAGTGACCCCAtactgtggaaagggcccaggatcaggagctggatggacatgggctccctctgctttggccacctcctaatcagtgaccaggagcaaatactttttctgagcctcggtg---tcatttgcacactgaggct---aaaagtctttatacagtcagtatttcacaggctgtcgtgcagagcaaatgaaatactggatgctgaaagtgcttcgt-aaC-----------TGCTAATAAATGATCCATTTTTCACCTCCTCAGGAGGCTCAGGTCTATCTCTGTCCCCGACTC-----CACTGCAAATCTTTCCCAGTCTTCCTTC s panTro4.chr10 76497674 954 + 133524379 CCGTGGATTTCTCTGGTCCCCCTCAGAAGAGACCAGTACTGTCTCTGGAACAAGCTACATAAATATCTCCATCCTGGGTCTTTAGAAGGCAGCAAGAAATGGAG----TGGGCCAATGGAGTTTCAGGAAGCTGTTTATGATTCTGATGCTTAGACCAAATGCAAAAGAACTGTAAAGGTGTCCCTCCCCCACTGT-CCCTTAGTGCCACACCATCCCAT-AATGG-CATGTTCCATTAATCTCAGCTCAAGGTAAGCTGAGTCATCAGCCAGAGAAAATGATGGCTCTGGGAACTGCCCAAGTCACATGGCATGAGCTGGGCATTAGGCAAGGACATGG--CATCCCAGGCTTCACAGGACGGGGACATTCTGTCCACAAAGGCCAAAGAGGGCAACTACAAAGGAAAAGTCTTA-TCTAAGACATCAGCAAACGGGTGCTGTTTCTGCCCCCTCTTTCTTCAATGTCATCTACACTGCCCTCCTCATCTACTTTGTGGGCTGCATTGAGAATCACGGACCACCAAGGCAACTCAGCCTGGGTCTGTAGTAGCAGCAACTAGGGCTCCTGAGGTCATGGAGAACCCCTTGCCCAC-------CACAATATTCCTGCTGAGTTTGAACTCGTCAGGACCCCTGCCATTGGGCGGGAGGCACAAAGTGACCCCAtactgtggaaagggcccaggatcaggagctggatggacatgggctccctctgctttggccacctcctaatcagtgaccaggagcaaagactttttctgagcctcggtg---tcatttgcacactgaggct---aaaagtctttatacagtcagtatttcacaggctgtcgtgcagagtaaatgaaatactggatgctgaaagtgcttcgt-aaC-----------TGCTAATAAATGATCCATTTTTCACCTCCTCAGGAGGCTCAGGTCTCTCTCTGTCCCCGACTC-----CACTGCAAATCTTTCCCAGTCTTCCTTC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76165694 953 - 133410057 CCATGGACTTCTCTGGTCCCCCTCAGAAGAGATCAGTACTGTCTCTGGAACAAGCTAGATAAATATCTCCATCCTGGGTCTTTAGAAGGCAGCAGGAAATGGAG----TGGGCCAATGGAGTTTCAGGAAGCTGTTTATGATTCTGATGCTTAGACCAAATGCAAAGGAACTGTAAAGGTGTCCCTCCCCCACTGT-CCCTTAGTGCCACACCATCCCAT-AATGG-CATGTTCCATTAATCTCAGTTCAAGGTAAGCTGAGTCATCAGCCAGAGAAAATGATGGCTCTGGGAACTGCCCAAGTCACATGGCATGAGCTGGGCATTAGGCAAGGACATGG--CATCCCAGGCTTCACAGGTCGGGGACATTCTGTCCACAAAGGCCAAAGAGGGCAACTACAAAGGAAAGGTCTTA-TCTAAGACATCAGCAAACGGGTGCTGTTTCTGCCCCCTCTTTCTTCAATGTCATCTACACTGCCTTCCTCATCTACTTTGTGGGCTGCATTGAGAATCACTGACCACCAAGGCAACTCAGCCTGGGTCTGTAGTAGCAGCAACTAGGGCT-CTGAGGTCATGGAGAACCCCCTGCCCAC-------CACAGTATTCCTGCTGAGTTTGAACTCGTCAGGACCCCTGCCATAGGGCAGGAGGCACAAAGTGACCCCAtactgtggaaagggcacaggatcaggagctggatggacatgggctccctctgctttggccacctcctaatcagtgaccaggagcaaatactttttctgagcctcggtg---tcatttgcacactgaggct---aaaagtctttatacagtcagtatttcacaggctgtcgtgcagagcaaatgaaatagtggatgctgaaagctcttcgt-aaC-----------TGCTAATAAATGATCCATTTTTCACCTCCTCAGGAGGCTCAGGTCTATCTCTGTCCCTGACTC-----CACTGCAAATCTTTCCCAGTCTTCCTTC i ponAbe2.chr10 I 5813 C 0 s nomLeu3.chr18 35102287 953 + 104879549 CCATGGACTTCTCTGGTCCCCCTCAGAAGAGACCAGTACTGTCTCTGAAACAAGCTAGATAAATATCTCCATCCTGGGTCTTTAGAAGGCAGCAGGAAATGGAG----TGGGCCAATGTAGTTTCAGGAAGCTGTTTATGATTCTGATGCTTAGACCAAATGCAAAAGAACTGTAAAGGTGTCCCTCCCCCACTGT-CCCTTAGTGCCACACCATCCCAT-AATGG-CATGTTCCATTAATCTCAGTTCAAGGTAAGCTGAGTCATCAGCCAGAGAAAATGATGGCTCTGGGAACTGCCCAAGTCACATGGCATAAGCTGGGCATTAGGCAAGGACATGG--CATCCCAGGCTTCACAGGTCGGGGACATTCTGTCCACAAAGGCCAAAGAGGGCAACTACAAAGGAAAGGTCTTA-TCTAAGACATCAGCAAACGGGTGCTGTTTCTGCCCCCTCTTTCTTCAGTGTCATCTACACTGCCCTCCTCATCTACTTTGTGGGCTGCATTGAGAATCACTGACCACCAAGGCAACTCAGCCTGAGTCTGTAGTAGCAGCAACTAGGGCT-CTGAGGTCATGGAGAACCCCTTGCCCAC-------CACAATATTCCTGCTGAGTTTGAACTTGTCAGGACCCCTGCCATAGGGCGGGAGGCACAAAGTGACCCCAtactgtggaaagggcacaggatcaggagctggatggacatgggctccctctgctttggccacctcctaatcagtgaccaggagcaaatactttttctgagcctcagtg---tcatttgcacactgagact---aaaagtctttatacagtcagtatttcacaggctgtcgtgcagagcaaatgaaatactggatgctgaaagcgcttcgt-aaC-----------TGCTAATAAATGATCCATTTTTCACCTTCTCAGGAGGCTCAGGTCTATCTCTGTCCCCGACTC-----CACTGCAAATCTTTCCCAGTCTTCCTTC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73897108 962 - 130959383 CTATGGACTTCTCTGAT-CCCCTCAGAAGAGACCAGTACTGCCTCTGAAATAAGCTAGATAAGTATCTCCATCCTGGGTCTTTAGAAGGCAGCAGGAAACGGAG----TGGGCCAATGGAGTTTCAGAAAGCTGTTTATGATTCTGATGCTTAGACTAAACGCAAAAAAACTGTAAAGGTGTCCCTCCCCCACTGT-CCCTTAGTGCCACACCATCCCAC-AATGG-CATGTTCCATTAATCTCAGTTCAACGTAAGCTGAGTCATCAGCCAGAGAAAATGATGGCTCTGGGAACTGCCCAAGTCTCATGGCATGAACTGGGCATTAGGCAAGGACATGG--CATCCCAGGCTTCACAGGTCAGGGACGCTCTGTCCACAGAGGCCAAAGAGGGCAACTACAAAGGAAAGGTCTTA-TCTAAGACATCAGCAAACGGGTGCTGTTTCTGCCCCCTCTTTCTTCAATGCCATCTACACTTCCCTCCTCATCTACTTTGTGGGCTGCCTTGAGAATCACTGACCACCAAGGCAACTCAGCCTGGGTCTGTAGTAGCAGCAACTAGGGCT-CTGAGGTCATGGAGAACCCCTTGCCCAC-------CACAATGTTCCTGCTGAGTTTCAACTCGTCAAGACCCCTGGCATAGGGTGGGAGGCACAAAGCGACCCCAtactgtggaaaggacacaggatcaggagctggatggacatgggctccctctgctttggccacctcctaatcagtgaccaggagcaaatactttttctgagcctt-gtg---tcatttgtacactgaggct---aaaagtctttatatagtcagtatttcacaggctgttctgcagagcaaatgaagtactggatgctgaaagtgcttcgt-aactataaaggaagtgctaataaatgATCCATTTTTCGCCTCCTCAGGAGGCTCAGGTCTATCTCCGTCCCCAACTC-----CACTGCAAATCTTTCCCAGTCTTCCTTC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75457741 961 - 133195287 CTATGGACTTCTCTGAT-CCCCTCAGAAGAGACCAGTACTGCCTCTGAAATAAGCTAGATAAGTATCTCCATCCTGGGTCTTTAGAAGGCAGCAGGAAACGGAG----TGGGCCAATGGAGTTTCAGAAAGCTGTTTATGATTCTGATGCTTAGACGAAACGCAAAAGAACTGTAAAGGTGTCCCTCCCCCACTGT-CCCTTAGTGCCACACCATCCCAC-AATGG-CATGTTCCATTAATCTCAGTTCAACGTAAGCTGAGTCATCAGCCAGAGAAAATGATGGCTCTGGGAACTGCCCAAGTCTCATGGCATGAACTGGGCATTAGGCAAGGACATGG--CATCCCAGGCTTCACAGGTCAGGGACACTCTGTCCACAGAGGCCAAAGAGGGCAACTACAAAGGAAAGGTCTTA-TCTAAGACATCAGCAAACGGGTGCTGTTTCTGCCCCCTCTTTCTTCAATGCCATCTACACTTCCCTCCTCATCTACTTTGTGGGCTGCCTTGAGAATCACTGACCACCAAGGCAACTCAGCCTGGGTCTGTAGTAGCAGCAACTAGGGCT-CTGAGGTCATGGAGAACCCCTTGCCCAC-------CACAATGTTCCTGCTGAGTTTCAACTCGTCAAGACCCCTGGCATAGGGTGGGAGGCACAAAGCGACCCCAtactgtggaaaggacacaggatcaggagctggatggacatgggctccctctgctttggccacctcctaatcagtgaccaggagcaaatactttttctgagcctt-gtg---tcatttgtacactgaggct---aaaagtctttatatagtcagtatttcacaggctgttctgcagagcaaatgaagtactggatgctgaaagtgc-tcgt-aactataaaggaagtgctaataaatgATCCATTTTTCGCCTCCTCAGGAGGCTCAGGTCTATCTCCGTCCCCAACTC-----CACTGCAAATCTTTCCCAGtcttccttc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73321061 963 - 125196307 CTATGGACTTCTCTGAT-CCCCTCAGAAGAGACCAGTACTGCCTCTGAAACAAGCTAGATAAGTATCTCCATCCTGGGTCTTTAGAAGGCAGCAGGAAATGGAG----TGGGCCAATGGAGTTTCAGGAAGCTGTTTATGATTCTGATGCTTAGactaaatgcaaaagaactgtaAAGGTGTCCCTCCCCTACTGT-CCCTCAGTGACACACCATCCCAC-AATGG-CATGTTCCATTAATCTCAGTTCAAGGTAAGCTGCGTCATCAGCCAGAGAAAATGATGGCTCTGGGAACTGCCCAAGTCTCATGGCATGAACTGGGTATTAGGCAAGGACATGG--CATCCCAGGCTTCACAGGTCAGGGACACTCTGTCCACAGAGGCCAAAGAGGGCAACTACAAAGGAAAGGTCTTA-TCTAAGACATCAGCAAACGGGTGCTGTTTCTGCCCCCTCTTTCTTCAATGCCATCTACACTTCCCTCCTCATCTACTTTGTGGGCTGCCTTGAGAATCACTGACCACCAAGGCAACTCAGCCTGGGTCTGTAGTAGCAGCAACTAGGGCT-CTGAGGTCATGGAGAACCCCTTGCCCAC-------CACAATGTTCCTGCTGAGTTTGAACTCGTCAAGACCCCTGGCATAGGGTGGGAGGCACAAAGCGACCCCATACTGTGGAAAGGACACAGGATCAGGAGCTGGATGGACATGGGCTCCCTCTGCTTTGGCCACCTCCTAATCAGTGACCAGGAGCAAATACTTTTTCTGAGCCTTGGTG---TCATTTGTACACTGAGGCT---AAAAGTCTTTATATAGTCAGTATTTCACAGGCTGTTTTGCAGAGCAAATGAAGTACTGGATGCCGAAAGTGCTTCGT-AACTATAAAGGAAATGCTAATAAATGATCCATTTTTCGCCTCCTCAGGAGGCTCAGGTCTATCTCCATCCCCAACTC-----CACTGCAAATCTTTCCCAGTCTTCCTTC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72153805 962 - 125710982 CTATGGAC-TCTCTGAT-CCCCTCAGAAGAGACCAGTACTGCCTCTGAAACAAGCTAGATAAGTATCTCCATCCTGGGTCTTTAGAAGGCAGCAGGAAATGGAG----CGGGCCAATGGAGTTTCAGGAAGCTGTTTATGATTCTGATGCTTAGACTAAAGGCAAAAGAACTGTAAAGGTGTCCCTCCCCCACTGT-CCCTTAGTGCCACACCATCCCAC-AATGG-CATGTTCCATTAATCTCAGTTCAACGTAAGCTGAGTCATCAGCCAGAGAAAACGATGGCTCTGGGAACTGCCCAAGTCTCATGGCATGAACTGGGCATTAGGCAAGGACATGG--CATCCCAGGCTTCACAGGTCAGGGACACTCTGTCCACAAAGACCAAAGAGGGCAACTACAAAGGAAAGGTCTTA-TCTAAGACATCAGCAAACGGGTGCTGTTTCTGCCCCCTCTTTCTTCAATGCCATCTACACTTCCCTCCTCATCTACTTTGTGGGCTGCCTTGAGAATCACTGACCACCAAGGCAACTCAGCCTGGGTCTGTAGTAGCAGCAACTAGGGCT-CTGAGGTCATGGAGAACCCCTTGCCCAC-------CACAATGTTCCTGCTGAGTTTGAACTCGTCAAGACCCCTGGCATAGGGTGGGAGGCACAAAGCGACCCCAtactgtggaaaggacacaggatcagaagctggatggacatgggctccctctgctttggccacctcctaatcagtgaccaggagcaaatactttttctgagcctcggtg---tcatttgtacactgaggct---aaaagcctttatatagtcagtatttcacaggctgttttgcagagcaaatgaagtactggatgctgaaagtgcttcgt-aactataaaggaaatgctaataaatgATCCATTTTTCGCCTCCTCAGGAGGCTCAGGTCTATCTCCGTCCCCAACTC-----CACTGCAAATCTTTCCCAGTCTTCCTTC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75613322 950 - 121768101 ------------------CCCCTCAGAAGAGACCAGTACAGTCTCTAAAATAAGCTAGAGAAATATCTCCATCCTGGATCTTTATAAGGCAGCAGG-AACGGAGTGGATGGACCAATGGAGTTTCAGAAACCTGTTCATGATTCTGCTGCTTAGACCGCATGAAAAAGAACTGTAAAGGCGTCCCTCCCCTGCTGC-CCCATAGTGCCACGCCATCCCAC-AGTGG-CGTGTTCCATTAACCTCAGTTCAAGGTAAGCTGAGTCATCAACCAGAGAAAATAATGGCTCTGGGAATTGCCCAAGTTTCATGGCATGAGCTGGGCATTAGGCAAGGACATGGTATATCCCAGGCTTGACAGGTTGGGGACATTCTGTACACAAAGGCCAAAGAGGGCAACTACAAAGGAAAGGTCTTA-ACTAAGACATCAGCAACTGGGAGCTGTTTCTGCCTCCTCGTCCTTCAATGCCATCCACACTGCCCTCCTCATCTACTTTGTGGGATGCCTTGAGAATCACTGACCACCAAGGCATCTCAGGCTGGGTCTCCCGGAGCAGCAACTGGGGCT-CTGAGGTCATGGAGAACCCTTCACCCAC-------CACAATATTCCTGCTGAGTTTGAACTTGTCAAGACCCCTGCCATACGGCAGGAGGCACGAAGTGACCGCAtactgtggaaggggcacaggatcaggagctggatggacacagtctccctctgctttggccacctcttgatcagtggccagaagc-agtactttttctgagcctcgttg---tcacttgtacactgaggct---gaaagtctttatgcagtcagtatttcacaggctgttgtgaagagcaaatgaaatactagatgttgaaagcgctttgt-aactataaaagaactgctaataaatgATCCATTCCTCGCCTCCTCAGGAGGCCCAGGTCTATCTCTGTCCCTGACTC-----CACTGCAACTTTTTCCCAGTCTTCCTTC i calJac3.chr12 C 0 C 0 s canFam3.chr4 27767368 875 + 88276631 ------------------CCACCCAAGGGAGACCACCACCATCTCTGGAATGAGCCAGATAGACATTTCCATCCTGA---CTTAGAAGGCAGCA---AACAGTA----TGAACCAGCGGGGTTTGGGGAACCTGCTCAAGGCTCTAGTGCTCACACTGAATGCCAAAG--TCGGCAAAATGTCTCCCTCCCACCGTCCCCTTCATCCCACGTCATCCTCCAAATGGCCATTGCCCATTAATCTCAGATCAGGGTACACAGAAGAGTCAGCCAGAGGGAATGATGGCTCTGGGAAGAGCCCAGGTCTCA-GGCACAAGTGGCAGAGTAGGCAAGGGCGTGA--CA-CCCAGGCCGCACAGCTCAGGGACACTCAGCCCACAAAGGCCAGAG-------------AGGAAACGTCTTGCTCT----CACCAGCGACGAGCTGCTGCCTCTGCCTCCT-TCCCTTCAGCAGCATCAACAGCACCCTCCCTGTCGGCTTTGCATGGTGCCTTGAAAACTACTGACCAGCAAG----------CTGGGTCC-------------CCAGGACT-CGGAGACCATGGAGAACCGCTTACCTCCCCCTCCACACAACATTCCTGCTGAGTTTGAACCTACCAAGATCCCTGCCAC---GTTGAGTGCACAgtgc--------accggacaaagggcacagggtcaggagctggatggatctgggctctccctgggttggtcacctactaa---------agggtcaaattatcttcctgagcctcagtatcttcatctatacaccggagctgtaagaagtcttta-----tctgtatctcacagattgttgtgcc-agcaaataaaataaaagacactgaaagtgctttgtaaactggaaagaaactgctcacaaatg--------CGAACCTGCCCCAGAGACCCAAG---------GTCCCCTGCTCCCTGACATTGTGCATTGTTCCCCAGTCGCCTTC i canFam3.chr4 C 0 C 0 e mm10.chr14 24208470 2502 + 124902244 I a score=395865.000000 s hg38.chr10_KI270825v1_alt 121188 115 + 188315 ATGC--TTCTCTCTACTTTCCACTGTCAGCCTCT-TCTCTTCCACAAACTCCTTCTTCCTTCTACTCTTATTCAAAACACAA----ACAACAAAAAC------AACAAACATGCATACAAAAGGAAAA s panTro4.chr10 76498628 115 + 133524379 ATGC--TTCTCTCTACTTTCCACTGTCAGCCTCT-TCTCTTCCACAAACTCCTTCTTCCTTCTACTCTTATTCAAAACACAA----ACAACAAAAAC------AACAAACATGCATACAAAAGGAAAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76166647 115 - 133410057 ATGC--TGCTCTCTACTCTCCACTGTCAGCCTCT-TCTCTTCCAGAAACTCCTTCTTCCTTCTACTCTTATTCAAAACACAA----ACAACGAAAAC------AACAAACATGCATACAAAAGGAAAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35103240 113 + 104879549 ATGC--TTCTCTCTGCTCTCCACTGTCAGA--CT-TCTCTTCCAGAAACTCCTTCTTCCTTCTACTCTTATTCAAAACACAA----ACAACAAAAAC------AACAACCATGCATACAAAAGGAAAA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73898070 115 - 130959383 ATGC--TTCTCTCTACTCTCTACTGTCAACCTCT-TCTCTTCCAGAAACTCCTTCCTCCTTCTACTCTTATTCAAAACACAA----ACAACAAAAAC------AACAAACATGCATACAAAAGGAAAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75458702 115 - 133195287 atgc--ttctctctactctctactgtcaacctct-tctcttccagaaactccttcttccttctactcttattcAAAACACAA----ACAACAAAAAC------AACAAACATGCATACAAAAGGAAAA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73322024 115 - 125196307 ATGc--ttctctctactctctactgtcaacctct-tctcttccagaaactccttcttccttctactcttattcaaaacacaa----acaacaaaaac------aacaaacatgcatacaaaaggaaaa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72154767 115 - 125710982 ATGC--TTCTCTCTACTCTCTACTGTTAACCTCT-TCTCTTCCAGAAACTCCTTCTTCCTTCTACTCTTATTCAAAACACAA----ACAACAAAAAC------AACAAACATGCATACAAAAGGAAAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75614272 107 - 121768101 ATGCCTCTCTCTCTACTCTCTATCGTCAGCCTCT-TCTCCTCCA-AAACTCCTTCTTCCTTCTACTCTTATTCAAAACA-------------AAAAC------AACAAACATACATACACAAGGAAAA i calJac3.chr12 C 0 C 0 s mm10.chr14 24210972 120 + 124902244 ATGT--ATTTCTGTATTTTTTTCTTTTTTTCTCTCCCTCTTCTAGTAACCCCTTCTATTTTCTATACTTATTCAAAACACGA------AACAAAACCCCTCCTCCCATACATGTGCACAGAAGGAAAA i mm10.chr14 I 2502 I 595 s canFam3.chr4 27768243 112 + 88276631 --------ACTCCTTCTCTTCACTGCCAGCCTCT-TCTCTTCCAGAAAGTCCTCCTT-TTCCAGTACTTACTCAAAACACCACACTGCAACAACAAA------CACAAGGAAATGAATAAAAAGTAAG i canFam3.chr4 C 0 C 0 a score=60947.000000 s hg38.chr10_KI270825v1_alt 121303 24 + 188315 GGAATTAAAACGCAAGAAggccag s panTro4.chr10 76498743 14 + 133524379 GGAATTAAAAc----------cag i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76166762 24 - 133410057 GGAATTAAAAAGCAAGAAggccag i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35103353 24 + 104879549 GGAATTAAAAAGCAAGAAggccag i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73898185 24 - 130959383 GGAATTAAAAAGCAAGAAGTccag i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75458817 24 - 133195287 GGAATTAAAAAGCAAGAAGTccag i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73322139 24 - 125196307 ggaattaaaaagcaagaaggccag i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72154882 24 - 125710982 GGAATTAAAAAGCAAGAAggccag i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75614379 24 - 121768101 GGAATTAAAAAACAAGAAggctgg i calJac3.chr12 C 0 C 0 s canFam3.chr4 27768355 19 + 88276631 GGCTtt-----gtcagaatgccag i canFam3.chr4 C 0 I 2560 e mm10.chr14 24211092 595 + 124902244 I a score=327767.000000 s hg38.chr10_KI270825v1_alt 121327 105 + 188315 gtgcagtggctcacgcctgtaatcccagcactctgggaggctgaggcaggtggatcacttgaggccaggagttggagaccagcctggccaacatggtgaaacctc s panTro4.chr10 76498757 105 + 133524379 gtgcagtggctcacgcctgtaatcccagcactctgggaggctgaggcaggtggatcacttgaggccaggagttggagaccagcctggccaacatggtgaaacctc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76166786 105 - 133410057 gtgcagtagctcacgcctgtaatcccagcactctgggaggctgttgcaggtggatcacttgaggccaggagctggagaccagcctggccaacatggtgaaacttc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35103377 105 + 104879549 gtgcagtggctcacgcctgtaatcccagcactctgggaggctgaggcaggtggatcacttgaggccaggagttggagaccaacctagccaacatggtgaaatctc i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73898209 105 - 130959383 gtgcagtggctcacgcctgtaaccccagcattctgggaggctgaggcaggtggatcacttgaggcctggagttggagaccagcctggccaacatggtgaaacctc i rheMac3.chr9 C 0 I 329 s macFas5.chr9 75458841 105 - 133195287 gtgcagtggctcacgcctgtaaccccagcattctgggaggctgaggcaggtggatcacttgaggcctggagttggagaccagcctggccaacatggtgaaacctc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73322163 104 - 125196307 gtgcagtggctcacgcctgtaatcccagcattctgggaggctgaggcaggtggatcacttgaggcctggagttggagaccagcctggccaacatggtgaaacct- i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72154906 102 - 125710982 gtgcagtggctcacgcctgtaaccccagcattctgggaggctgaggcaggtggatcacttgaggccaggagttggagaccagcctggccaacatggtgaaac--- i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75614403 105 - 121768101 gcgcagtggctcacgcctgtaatcctagcattctgggaggctgaggtaggtggatcacttgaggccaggagctggagatcagcctggacaatatggtgaaacccc i calJac3.chr12 C 0 C 0 e canFam3.chr4 27768374 2560 + 88276631 I e mm10.chr14 24211092 595 + 124902244 I a score=8989.000000 s hg38.chr10_KI270825v1_alt 121432 29 + 188315 gtctctactaaaaaaa----taca--------aaaaaaaaa s panTro4.chr10 76498862 34 + 133524379 gtctctactaaaaaaaatactaaa-------taaaaaaaaa i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76166891 37 - 133410057 gtctctactaaaaaaa----tacaaaaaaaaaaaaaaaaaa i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35103482 27 + 104879549 gtctctactaaaaa------taaa--------taaataaat i nomLeu3.chr18 C 0 C 0 s macFas5.chr9 75458946 25 - 133195287 ----ctatttaaaaaa----aaaa--------aaaaaaaaa i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73322267 16 - 125196307 ----atttttaaaaaa----aaaa----------------- i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72155008 19 - 125710982 ----ctatttaaaaaa----aaaa--------aaa------ i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75614508 36 - 121768101 atctatactaaaaaaa----aaaaacacacacacacaaaa- i calJac3.chr12 C 0 C 0 e canFam3.chr4 27768374 2560 + 88276631 I e mm10.chr14 24211092 595 + 124902244 I e rheMac3.chr9 73898314 329 - 130959383 I a score=296502.000000 s hg38.chr10_KI270825v1_alt 121461 109 + 188315 aaagtcagcctggtgtggtggtgcacgtctgtaatgccagctactcgg-gagggtgaggcacgagaacctgggaaacagaggttgcagtgggcc--------gagatcactccactgc s panTro4.chr10 76498896 110 + 133524379 aaagtcaacctggtgtggtggtgcacacctgtaatgccatctacttggagagggtgaggcacgagaacctgggaaacagaggttgcagtgggcc--------gagatcactccactgc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76166928 109 - 133410057 aaaatcagcctggtgtggtggtgcacgcctgtaatgccagctactcgg-gagggtgaggcacgagaacctgggaagcagaggttgcagtgggcc--------gagatcactccactgc i ponAbe2.chr10 C 0 I 1714 s nomLeu3.chr18 35103509 109 + 104879549 aaaatcaacctagtgtggtggtacacgcctgtaatgccagctactcag-gagtgtgaggcacgagaacctgggaagcagaggttgcagtgagcc--------gagatcactccactgc i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73898643 117 - 130959383 aaaatcagccaggtgtggtggtacacacctgtaatcccagctactcag-gagggtgaggcacgagaacctgggatgcagagattgcagtgagccaagatcaggagatcacaccactac i rheMac3.chr9 I 329 C 0 s macFas5.chr9 75458971 117 - 133195287 aaaatcagccaggtgtggtggtacacacctgtaatcccagctactcag-gagggtgaggcacgagaacctgggatgcagagattgcagtgagccaagatcaggagatcacgccactac i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73322283 117 - 125196307 aaaatcagccaggtgtggtggtacacacctataatcccagctactcgg-gagggtgaggcacgagaatctgggatgcagagattgcagtgagccaagatcaggagatcacaccactac i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72155027 117 - 125710982 aaaatcagccaggtgtggtggtacacacctgtaatcccagctactcgg-gagggtgaggcacgagaacctgggatgcagagatcgcagtgagccaagatcaggagatcacgccactac i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75614544 102 - 121768101 aaaatctgccaggtatagtggcacacacatgtaatcccagctactcgg-gaggct-------gagaacccgggaagcagaggttgcagtgagcc--------aagattacaccactgc i calJac3.chr12 C 0 C 0 e canFam3.chr4 27768374 2560 + 88276631 I e mm10.chr14 24211092 595 + 124902244 I a score=127254.000000 s hg38.chr10_KI270825v1_alt 121570 55 + 188315 actccagcctgggtgcactccagcgaaacaatgtctc--------aaagaaaaaaaaaaaaa---a s panTro4.chr10 76499006 54 + 133524379 actccagcctgggtgcactccagcgaaacaatgtctc--------aaagaaaaaaaaaaaaa---- i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76168751 58 - 133410057 actccagcctgggtgcactccagtgaaacaatgtctc--------aaagaaaaaaaaaaaaaaaaa i ponAbe2.chr10 I 1714 C 0 s nomLeu3.chr18 35103618 58 + 104879549 actccagcctgggtgcactccagcgaaacaatgtctc--------aaagaaaaaaaaaaaaaaaaa i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73898760 61 - 130959383 actccagcctgggtgcattccagtgaaacaatgtgtcaaaaaaaaaaaaaaaaaaaaaaaa----- i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75459088 53 - 133195287 actccagcctgggtgcattccagtgaaacaatgtgtc--------aaaaaaaaaaaaaaaa----- i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73322400 51 - 125196307 actccagcctgggtgcattCCAGTGAAAcaatgtgtc----------aaaaaaaaaaaaac----- i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72155144 58 - 125710982 actccagcctgggtgcattccagtgaaacaatgtgtc---aaaaaaaaaaaaaaaaaaaaa----- i chlSab2.chr9 C 0 I 122 s calJac3.chr12 75614646 56 - 121768101 actcaaggctgggtgcactccagtgagacaatgtctt--------taaaaaaacaacaacaaca-- i calJac3.chr12 C 0 C 0 e canFam3.chr4 27768374 2560 + 88276631 I e mm10.chr14 24211092 595 + 124902244 I a score=938526.000000 s hg38.chr10_KI270825v1_alt 121625 314 + 188315 CACCCAAGAGCTTCACCTCCATTTCTCTCCATTAGAGGTGTCCAAAATCTCTGGGCCCTCA--GGGTGGACCACACCTCACCTAGTTTCACGCAA-TTCTACGCTGACTTTCATTACTATGGGTGAAAGCTCCAGCTTCTGGGCCTTGGAGTTCAAGAATGCCCAGGGTTTTTGAACACAGGAATAAGCAAGCAGGTATGAGCTTCAGGAA---------CCTGTCTCC---AGCAACTGTGAACTGGAAGGATGGAAGCAGGGAGAGCCTGGAAGCTGAGAGAACAGTTAGGATGTTCCCACAAGAGCTGCCCTTAACT-----ACTGGTCAT s panTro4.chr10 76499060 314 + 133524379 CACCCAAGAGCTTCACCTCCATTTCTCTCCATTAGAGGTGTCCAAAATCTCTGGGCCCTCA--GGGTGGACCACACCTCACCTAGTTTCACGCAA-TTCTACGCTGACTTTCATTACTATGGGTGAAAGCTCCAGCTTCTGGGCCTTGGAGTGCAAGAATGCCCAGGGTTTTTGAACACAGGAATAAGCAAGCAGGTATGAGCTTCAGGAA---------CCTGTCTCC---AGCAACTGTGAACTGGAAGGATGGAAACAGGGAGAGCCTGGAAGCCGAGAGAACAGTTAGGATGTTCCCACAAGAGCTGCCCTTAACT-----ACTGGTCAT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76168809 314 - 133410057 CACCCAAGAGCTTCACCTCCATTTCTCTCCATTAGAGGTGTCCAAAATCTCTGGGCCCTCA--GGGTGGACCACACCTCACCTAGTTTCACACAA-TTCTATGCTGACTTTCATTACTATGGGTGAAAGCTCCAGCTTCTGGGCCTTGGAGCTCAAGAATGCCCAGGGTTTTTGAACACAGGAATAAGCAAGCAGGTATGAGCTTCGGGAA---------CCTGTCTCC---AGCAACTGTGAACTGGAAGGATGGAAGCAGGGAGAGCCTGGAAGCAGAGAGAACAGTTACGATGTTCCCACAAGAGCTGTCCTTAACT-----ACTGGTCAT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35103676 314 + 104879549 CACCCAAGAGCTTCACCTCCATTTCTCCCCATTAGAGGTGTCCAAAATCTCTGGGCCCTCA--GGGTGGACCACACCTCACCTAGTTTCACACAA-TTCTACGCTGACTTTCATTACTATGGGTGAAAGCTCCAGCTTTTGGGCCTTGTAGTTCAAGAATGCCCGGGGTTTTTGAACCCAGGAATAAGCAAGCAGGTATAAGCTTCAGGAA---------CCTGTCTCC---AGCAACTGTGAACTGGAAGGATGGAAGCAGGGAGAGCCTGGAAGCAGACAGAACAGTTAGGATGTTCCCACAAGAGCTGCCCTTAACT-----ACTGGTCAT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73898821 315 - 130959383 CACCCAAGAGCTTCACCTCCATTTCACTCCATTAGAGGTGTCCAAAATCTCTGGGCCCTCA--GGGTGGACCACATCTCACCTAGTTTCACACAATTTCTACTCTGACTTTCATTACTATGGGTGAAAGCTCCAGCTTCTGCGCCTTGGAGTTCAAGAATGCCCAGGGTTTTTGAACACAGGAATCAGCAAGCAGGTATGAGCTTCGGGAA---------CCTGTCTCC---AGCAACTGGGAACTGGAAGGATGGAAGCAGGGAGAGCCTGGAAGTAGAGAGAACAGTTAGGATGTTCCCACAAGAGCCGTCCTTAACT-----ACTGGTCAT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75459141 315 - 133195287 CACCCAAGAGCTTCACCTCCATCTCTCTCCATTAGAGGTGTCCAAAATCTCTGGGCCCTCA--GGGTGGACCACATCTCACCTAGTTTCACACAATTTCTACTCTGACTTTCATTACTATGGGTGAAAGCTCCAGCTTCTGCGCCTTGGAGTTCAAGAATGCCCAGGGTTTTTGAACACAGGAATCAGCAAGCAGGTATGAGCTTCGGGAA---------CCTGTCTCC---AGCAACTGGGAACTGGAAGGATGGAAGCAGGGAGAGCCTGGAAGTAGAGAGAACAGTTAGGATGTTCCCACAAGAGCCGTCCTTAACT-----ACTGGTCAT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73322451 315 - 125196307 cacccaagAGCTTCACCTCCATTTCTCTCCATTAGAGGTGTCCAAAATCTCTGGGCCCTCA--GGGTGGACCACATCTCACCTAGTTTCACACAATTTCTACTCTGACTTTCATTACTATGGGTGAAAGCTCCAGCTTCTGCGCCTTGGAGTTCAAGAATGCCCAGAGTTTTTGAACACAGGAATCAGCAAGCAGGTATGAGCTTCGGGAA---------CCTGTCTCC---AGCAACTGGGAACTGGAAGGATGGAAGCAGGGAGAGCCTGGAAGTAGAGAGAACAGTTAGGATGTTCCCACAAGAGCTGTCCTTAACT-----ACTGGTCAT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72155324 315 - 125710982 CACCCAAGAGCTTCACCTCCATTTCTCTCCATTAGAGGTGTCCAAAATCTCTGGGCCCTCA--GGGTGGACCACATCTCACCTAGTTTCACACAATTTCTACTCTGACTTTCATTACTAAGGGTGAAAGCTCCAGCTTCTGGGCCTTGGAGTTCAAGAATGCCCAGGGTTTTTGAACACAGGAATCAGCAAGCAGGTATGAGCTTTGGGAA---------CCTGTCTCC---AGCAACTGGGGACTGCAAGGATGGAAGCAGGGAGAGCCTGGAAGCAGAGAGAACAGTTAGGATGTTCCCACAAGAGCTGTCCTTAACT-----ACTGGTCAT i chlSab2.chr9 I 122 C 0 s calJac3.chr12 75614702 315 - 121768101 aaaCCAAGCGCTTCACCTCCATTTCTCTCCATTAGAGATGTCCAAAATCTCTGGGCCCTCAGGGGGTGGACCACACCTCACCTAGTTTCACACAA-TTCTACACTGACTTTTGTTCCTATGAGTGAAAGCTCCAGCTTCTGAGCTTTGGAGCTCAAGAATGCCCAGGGTTTTTGAACACAGGAATAAGCAAGCAGAGATGAGCTTCAGGAAACATCTGATCTGGTCACTTGGAGGAACTGTGACCTGGAAGGATGGAAGCAGGG-----------------AGAATGGTGAGGATGTT-CTGCAAGAGCTGCCCTGAACTCTCAAGCTGGTCAT i calJac3.chr12 C 0 C 0 e canFam3.chr4 27768374 2560 + 88276631 I e mm10.chr14 24211092 595 + 124902244 I a score=689160.000000 s hg38.chr10_KI270825v1_alt 121939 221 + 188315 GGGGTACGGGTAGGGAGAGGGCCCAAGACCACAGGTAGGGAAGAATGGAGG---ATGGTGCTGAGGTTTGTGGTTGGGGCATCCCAGAAGGTGACACAGTTAACAGAGGCAGAGGATTAAAGGAGGAGGA-----------ATGAGATCGTTGAAATCCATCAGGTAGAATGCACTAAAGAAAA--------------------------------TCC----CTGTGAAG-----------ACAGC------CTGCTGACACT------CAGAAACTGGAATGTGGCACCACA s panTro4.chr10 76499374 221 + 133524379 GGGGTATGGGTAGGGAGAGGGCCCAAGACCACGGGTAGGGAAGAATGGAGG---ATGGTGCTGAGGTTTGTGGTTGGGGCATCCCAGAAAGTGACACAGTTAACAGAGGCAGAGGATTGAAGGAGGAGCA-----------ATGAGATCGTTGAAATCCATCAGGTAGAATACACTAAAAAAAA--------------------------------TCC----CTGTGAAG-----------ACAGC------CTGCTCACACT------CAGAAACTGGAATGTGGCACCACA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76169123 221 - 133410057 GGGGTATGGGTAGGGAGAGGGCCCAAGACCACGGGTAGGGAAGAATGGAGG---ATGGTGCTGAGGTTTGTGGTTGGGGCATCCCAGAAGGTGACACAGTTAACAGAGGCAGAGGATTGAAGAAGGAGGA-----------ATGAGATCGTTGAAATCCATCGGGTAGAATGCACTAAAGAAAA--------------------------------TCC----CTGTGAAG-----------ACAGC------CTGCTGATACT------CAGAAACTGGAATGTGGCACCACA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35103990 221 + 104879549 GGGGTACGGGTAGGGAGAGGGCCCAAGACCACGGGTAGGGAAGAATGGAGG---ATGGTGCTGAGGTTTGTGGTTGGGGCATCCCAGAAGGTGACACAGTTAACAGAGGCAGAGGATTGAAGAAGGAGGA-----------ATGAGATCGTTGAAATCCATCAGGTAGAATGCACTAAAGAAAA--------------------------------TCC----CTGTGAAC-----------ACAGC------CTGCTGACACT------CAGAAACTGGAATGTGGCACCACG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73899136 221 - 130959383 GGGGTATGGGTGGGGAGAGGGCCCAAGATCACGGGTAGGGAAGAATGGAGG---ATGGTGCTAAGGTTTGTGGTTGGGGCATCCTAGAAGGTAACACAGTTAACAAAGGCAGAGGATTGAAGAAAGAGGA-----------ATGAGATCATTGAAATCCATCAGGTGAAATGCACGAAAGAAAA--------------------------------TCC----TTGTGAAG-----------ACAGC------CTGCTGACACT------CAGAAACTGGAATGTGGCACCACG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75459456 221 - 133195287 GGGGTATGGGTGGGGAGAGGGCCCAAGATCACGGGTAGGGAAGAATGGAGG---ATGGTGCTGAGGTTTGTGGTTGGGGCATCCTAGAAGGTAACACAGTTAACAAAGGCAGAGGATTGAAGAAAGAGGA-----------ATGAGATCATTGAAATCCATCAGGTGAAATGCACGAAAGAAAA--------------------------------TCC----TTGTGAAG-----------ACAGC------CTGCTGACACT------CAGAAACTGGAATGTGGCACCACG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73322766 221 - 125196307 GGGGTATGGGTGGGGAGAGGGCCCAAGATCACAGGTAGGGAAGAATGGAGG---ATGGTGCTGAGGTTTGTGGTTGGGGCATCCTAGAAGGTAACACAGTTAACAGAGGCAGTGGACTGAAGAAAGAGGA-----------ATGAGATCGTTGAAATCCATCAGATGGAATGCATGAAAGAAAA--------------------------------TCC----TTGTGAAG-----------ACAGC------CTGCTGACACT------CAGAAACTGGAATGTGGCACCACG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72155639 221 - 125710982 GGGGTATGGGTGGGGAGAGGGCCCAAGATCACAGGTAGGGAAGAATGGAGG---ATGGTGCTGAGGTTTGTGGTTGGGGCATCCTAGAAGGTAACACAGTTAACAGGGGCAGTGGACTGAAGAAAGAGGA-----------ATGAGATCGTTGAAATCCATCAGGTAGAATGCATGAAAGAAAA--------------------------------TCC----TTGTGAAG-----------ACAGC------CTGCTGACACT------CAGAAACTGGAATGTGGCAGCACG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75615017 219 - 121768101 GGGGTAT-GGTAGGGAGAGGGCCCAAGACCATGGGTAGGG-AGAATGGAGG---ATGGTGCTGAGGTTTGTGGTTGGGGCATCCCAGAAAGTGACAGAGTTAATAGGGGCAGAGGACTAAAGAAGGAGGA-----------GTGAGATAGGAGAAATGCATCAGGTGGAATGCACCAAAGACAA--------------------------------TCC----CTGTGAAG-----------ACAGC------CTGCTGATACT------CAGAAACTGCAATGTGGTGCCACA i calJac3.chr12 C 0 C 0 s mm10.chr14 24211687 274 + 124902244 gggagagggagagggagaggg---------agagggagagggagagggagagCTATGGGCATCAGGCTGAGGGGTTTGGTGTCCAAGAAGGATACACTGTTAGCAGGGGCAGAGAACTGAAGAGGCTGAATCCGCCCAATGATAAAATCACCAAAATGCACCAGTCTGGATACACTAAAGAAAAAGTCTCCAtggttcagggctgaagcgcttgcctcccatgctgtgaggccctgctttccacagctcagcactacaaacaaCTCATAGCAGAGACC-----------CCAGG i mm10.chr14 I 595 C 0 e canFam3.chr4 27768374 2560 + 88276631 I a score=414062.000000 s hg38.chr10_KI270825v1_alt 122160 116 + 188315 GAGAAAGTTTCAGGCTAACA--CAGTCCACTCCAGAGTCACACCATTGAG-CCTGC-----AGGATGTGAGTGACAAGCCCAGAGTCACTAATTGGTAATGTGAAGCCCCTGGGTTAGAAAAAA s panTro4.chr10 76499595 116 + 133524379 GAGAAAGTTTCAGGCTAACA--CAGTCCACTCCAGAGTCACACCATTGAG-CCTGC-----AGGATGTGAGTGACAAGCCCAGAGTCACTAATTGGTAATGTGAAGCCCCTGGGTTAGAAAAAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76169344 116 - 133410057 GAGAAAGTTTCAGGCTAACA--CAGTCCACTCCAGAGTCACACCATTGAG-CCTGC-----AGGATGTGAGTGACAAGCCCAGAGTCACTAATTGGTAATGTGAAGCCCCTGGGTTAGAAAAAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35104211 116 + 104879549 GAGAAAGCTTCAGGCTAACA--CAGTCCACTCCAGAGTCACACCATTGAG-CCTGC-----AGAATGTGAGTGACAAGCCCAGAGTCACTAATTGGTAATGTAAAGCCCTTGGGTTAGAAAAAA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73899357 116 - 130959383 GAGAAAGTTTCAGGCTAACA--CAGTCCACTCCAGAGTCACACCATTGAG-CCTGC-----AGGATGTGAGTGACAAGCCCAGAGTCACTCATTGGTAATGGGAAGCCCTTGGGTTAGAAAAAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75459677 116 - 133195287 GAGAAAGTTTCAGGTTAACA--CAGTCCACTCCAGAGTCACACCATTGAG-CCTGC-----AGGATGTGAGTGACAAGCCCAGAGTCACTCATTGGTAATGGGAAGCCCTTGGGTTAGAAAAAA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73322987 115 - 125196307 GAGAAAGTTTCAGGCTAACA--CAGTCCACTCCAGAGTCACACCATTGAG-CCTGC-----AGGATGTGAGTGACAAGCCCAGAGTCACTAATTGGTAATGGGAAGCCCTTGGGTTAG-AAGAA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72155860 115 - 125710982 GAGAAAGTTTCAGGCTAACA--CAGTCCACTCCAGAGGCACACCATTGAG-CCTGC-----AGGATGTGAGTGGCAAGCCCAGAGTCACTAATTGGTAATGGGAAGCCCTTGGGTTAG-AAAAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75615236 116 - 121768101 GAGAAAGTTTCAGGCTAACA--CAGTCCACTCCAGAGTCACGCCACGGAG-CCTGC-----AGGATGTGAGTGACAGGCCCAGCATTACTAACTGGTAACGTGAAGCCCTTAAGTTAAAAAAAC i calJac3.chr12 C 0 C 0 s mm10.chr14 24211961 107 + 124902244 AAGACAGCCT---GCTGACAGTCACTCAAGTCCAGAG-----CTAGTGAGACCTACTGAGGAGGCTGTGCAACACAAGTCCAGGACCTCGAGCTGCTGATGTGATGCCCTTTGGT--------- i mm10.chr14 C 0 C 0 s canFam3.chr4 27770934 114 + 88276631 GGGACAGTTTCAGACTAATA--CAGTCCCCATGGGAATCATCCCATCATG-CCTGG-----AGAACGTG--TGACCAGCTCACAGTCCCTACCTGGTAATATGAAGCCCTTGGCTAAGAAAGAA i canFam3.chr4 I 2560 I 237 a score=304154.000000 s hg38.chr10_KI270825v1_alt 122276 104 + 188315 ACATAAGACTCAATTTGAACAATGTCATTGGGAAAGAAAAAGAAAAAACAGAGGAGAG---GGCTGGATCTATGGACCCCCTAAACAGTGACTATGAAGTAACAttg s panTro4.chr10 76499711 104 + 133524379 ACATAAGACTCAATTTGAACAATGTCATTGGGAAAGAAAAAGAAAAAACAGAGGAGAG---GGCTGGATCTATGGACCCCCTAAACAGTGACTATGAAGTAACAttg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76169460 104 - 133410057 ACGTAAGACTCAATTTGAACAATGTCATTGGGAAAGAAAAAGAAAAAACAGAGGAGAG---GGCTGGATCTATGGACCCCCTAAACAATGACTATGAAGTAACAttg i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35104327 104 + 104879549 ACGTAGGACTCAATTTGAACAATGTCATTGGGAAAGAAAAAGAAAAAACAGAGGAGAG---GGCTGGATCTATGGACCCCCTAAACAGTGACTATGAAGTAACAttg i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73899473 104 - 130959383 ACATAAGACACAATTTGAACAATGTCACTGGGAAAGAAAAAGAAAAAACAGAGGAGAG---GCCTGGATCTATGGACCTCCTCAACAGTGACTATGAAGTAACATTG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75459793 104 - 133195287 ACATAAGACACAATTTGAACAATGTCACTGGGAAAGAAAAAGAAAAAACAGAGGAGAG---GCCTGGATCTATGGACCTCCTAAACAGTGACTATGAAGTAACAttg i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73323102 104 - 125196307 ACATAAGACTCAATTCGAACTATGTcactgggaaagaaaaagaaaaaacagaggagAG---GCCTGGATCTATGGACCTCCTAAACAGTGACTATGAAgtaacactg i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72155975 104 - 125710982 ACATAAGACTCAATTTGAACAATGTCACTGGGAAAGAAAAAGAAAAAACAGAGGAGAG---GCCTGGATCTATGGACCTCCTAAACAGTGACTATGAAGTAACAttg i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75615352 81 - 121768101 ACATAAGACTCAATTTGAACAACGTCACTGGGAAA-ACAAAGAAAAAACAGAGGAGAG---GGCTGGATCTATGGACCTCCCAAA---------------------- i calJac3.chr12 C 0 C 0 s mm10.chr14 24212068 66 + 124902244 ---------------------------------------AAGTACAAGCAGAGGTGGGAGAGGCCAGATGTA-GGACTTCCTAAACACTGA-TGGGCAGTGACACTG i mm10.chr14 C 0 I 15 e canFam3.chr4 27771048 237 + 88276631 I a score=852094.000000 s hg38.chr10_KI270825v1_alt 122380 316 + 188315 ttctttttttttttttttttttttttgagacggagtctccctctgttgcccaggctggagtgcagtggtgtgatctcagctcactgcaacctcccccttctgggttcaagcaattctcctgactcagcctcccaagtaactgggattacaggtacctgccaccagaagttggctaattttttgtatttttaggagagacagtgttttgccatgtaggccaggctggtctcaaactcctgacctcaggggattcacccacctcagcctcccaaagttctgggattacaggcgtgagccatcacgcctggccTGAAGT s panTro4.chr10 76499815 309 + 133524379 tt------tcttttttttttttttttgagacggagtctccctctgttgcccagcctggagtgcagtggtgtgatctcagctcactgcaacctcccccttctgggttcaagcaattctcctgactcagcctctcaagtaactgggattacaggtgcctgccaccagaagc-agctaattttttgtatttttagGagagacagtgttttgccatgtaggccaggctggtctcaaactcctgacctcaggggattcacccacctcagcctcccaaagttctgggattacaggcgtgagccatcacgcctggccTGAAGT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76169564 314 - 133410057 ttctttt-ttttttttttttttttttgagacggagtctccctctgttgcccaggctggagtgcagtggtgtgatctcagctcactgcaacctctgccttctggattcaagcaattctcctgactcagcctcccaagtaactgggattacaggtgcctgccaccaggagt-ggctaattttttgtatttttaggagagacagtgttttgccatgtaggccaggctggtctcaaactcctgacctcaggagatccacccacctcagcctcccaaagttctgggattacaggcatgagccaccatgcctggccTGAAGT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35104431 310 + 104879549 ttc-----ttttttttttttttttttgagacggagtctccctctgttgcccaggctggagtgcagtggtgtgatctcagctcactgcaacctccgccttctgggttcaagcaattctcctgactcagcctcccaagtaactgggattacaggtgcctgacactaggagc-ggctaattttttgtatttttaggagagacaatgttttgccatgtaggccaggctggtctcaaactcctgacctcaggggatccacccacctcagccacccaaagttctgggattacaggcgtgagccaccacgcccagccTGAAGT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73899577 306 - 130959383 TTC---------Attttttttcctttgagaaggagtctccctctgttgcccaggcttgaatgcagtggtgcaatctcagctcactgcaacctctgccttctgggttcaagctattctcctgactcagcctctcaagtaactgagattacaggtgcctgccaccaggagc-agctaattttttgtatttttaggacagacagtgttttgtcatgtaggccaggctggtctcaaactcctgacctcaggggatccacccacctcagcctcccaaagttcagggattacaggcacaagccaccacacccagccTGAAGT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75459897 306 - 133195287 ttc---------tttttttttcctttgagaaggagtctccctctgttgcccaggcttgaatgaagtggtgcaatctcagctcactgcaacctctgccttctgggttcaagctattctcctgactcagcctctcaagtaactgagattacaggtgcctgccaccaggagc-agctaattttttgtatttttaggagagacagtgttttgtcatgtaggccaggctggtctcaaactcctgacctcaggggatccacccacctcagcctcccaaagttcagggattacaggcacaagccaccacacccagccTGAAGT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73323206 307 - 125196307 ttc--------tttttttttttctttgagaagaagtctccctctgttgcccaggcttgagtgtagtggtgcaatctcagctcactgcaacctccgccttctgggttcaagcgattctcctcactcagcctctcaagtaactgagattacaggtgcctgccaccaggagc-agctaattttttgtatttttaggaaagacagtgttttgccatgtaggccaggctggtctcaaactcctgacctcaggggatccacccacctcagcctcccaaagttcagggattacaggcacaagccaccacacccggcctgaagt i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72156079 307 - 125710982 ttc--------tttttttttttctttgagaaggagtctccctctgttgcccaggcttgagtgtagtggtgcaatctcagctcactgcaacctccgccttctgggttcaagcgattctcctgactcagcctctcaagtaactgagattacaggtgcctgccaccaggagc-agctaattttttgtatttttaggaaagacagtgttttgccatgtaggccaggctggtctcaaactcctgacctcaggggatccacccacctcagcctcccaaagttcagggattacaggcacaagccaccacgcccggccTGAAGT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75615433 263 - 121768101 --------------------------------------------------caggctggagtacagtggcacaatctcagctcactgtaacccatgcc-tctgggttcaagcgattctcccaccttagccttccaagtagctcggattacaggaacctgccacaacgggc-agctaattttttacattttgaatagagacag-ggttcgctatataggccagtctggtctcaaactcctgacttcaagggatccacccactttggcctcccaaagtgctgggattacaggtataagccaccatgcctggccTAAAGT i calJac3.chr12 C 0 C 0 e canFam3.chr4 27771048 237 + 88276631 I e mm10.chr14 24212134 15 + 124902244 I a score=72201.000000 s hg38.chr10_KI270825v1_alt 122696 27 + 188315 AACATTGTTCTAAGTGTATATAAAGTT s panTro4.chr10 76500124 27 + 133524379 AACATTGTTCTAAGTGTATATACAGTT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76169878 25 - 133410057 AACATTGTTCTAAGCG--TAAACAGTT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35104741 25 + 104879549 AACATTGTTCTAAGTG--TATACAGTT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73899883 25 - 130959383 AACATTGTTCTAAGTG--TATACAGTT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75460203 25 - 133195287 AACATTGTTCTAAGTG--TATACAGTT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73323513 25 - 125196307 AACATTGTTCTAAGTG--TATACAGTT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72156386 25 - 125710982 AACATTGTTCTAAGTG--TATACAGTT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75615696 25 - 121768101 AATATTGTTCTAAGCA--TACACAGGA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27771285 24 + 88276631 AGTACTGTTCTAGGCA--CATACAGA- i canFam3.chr4 I 237 C 0 e mm10.chr14 24212134 15 + 124902244 I a score=1453142.000000 s hg38.chr10_KI270825v1_alt 122723 446 + 188315 CAGAATCTGGGGAAATACTTCCTGTGAAGACAGGAGGAAAAAAT--GAGTTTCTGGAAAAGACATAGAAAGATCACTTGGAGCAGGG---------GTAGGAGGAGCAAGAGAA-------------TGATGCATCCTAG-------AAGGCAATG--GGGTGGAGGGA-GCCT-GGAGGGGTTGGTCTGCCACACCA-------------AATGCTAG------GG-AGGACTCGGAA-GCAAAGAAACTTCTGATCTGGTC---------------------------------------ATTTGGAGGTCAAAGATGCTAT-GCATGGAGTCAATTAAGC-AGGCAATTGATTGGCCCT-GTTTCTCCATCTGAGAATTGAAGGGCTTGGAT--AAGACCAG-AAAAGG-CACAAGGTGCATCTTGAAAGAGCAGCCATGCATCACACCGCCTGCCTG-AGTACTGT---------GCCTAAAGCCATACCTCAGCTCAC-TGGGAAAGGACCCCACAGTG-GATCAGCAACGTCTGCCTTGGGCAAGTCGGGCAAG s panTro4.chr10 76500151 446 + 133524379 CAGAATCTGGGGAAATACTTCCTGTGAAGACAGGAGAAAAAAAT--GAGTTTCTGGAAAAGACATAGAAAGATCACTTGGAGCAGGG---------GTAGGAGGAGCAAGAGAA-------------TGATGCATCCTAG-------AAGGCAATG--GGGTGGAGGGA-GCCT-GGAGGGGTTGGTCTGCCACACCA-------------AATGCTAG------GG-AGGACTCGGAA-GCAATGAAACTTCTGATCTGGTC---------------------------------------ATTTGGAGGTCAAAGATGCTAT-GCATGGAGTCAATTAAGC-AGGCAATTGATTGGCCCT-GTTTCTCCATCTGAGAATTGAAGGGCTTGGAT--AAGACCAG-AAAAGG-CACAAGGTGCATCTTGAAAGAGCAGCCATGCATCACACCGCCTGCCTG-AGTACTGT---------GCCTAAAGCCATACCTCAGCTCAC-TGGGAAAGGACCCCACAGTG-GATCAGCAACGTCTGCCTTGGGCAAGTCGGGCAAG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76169903 424 - 133410057 CAGAATCTGGGGAAATACTTCCTGTGAAGACAGGAGAAAAAAATAAGAGTTTCTGGAAAGGACATAGAAAGATCACTTGGAGCAGGG---------GTAGGAGGAGCAAGAGAA-------------TGACGCATCCTAG-------AAGGCAATG--GGGTGGAGGGA-GCCT-GGAGGGGCTGGTCTGCCACACCA-------------AATGCTAG------GG-AGGACTCGGAA-GCAAAGAAACTTCTGACCTGGTC---------------------------------------ATTTGGAGGTCAAAGATGCTAT-GCATGGAGTCAATTAAGC-AGGCAACTGATTGGCCCT-GTTTCTCCATCTGAGAATTGAAGGGCTTGGAT--AAGACCAG-AAAAGG-CACAAGGTGCATCTTGAAAGAGCAGCCATGCA--------------------NNNNN---------NNNNNAAGCCATACCTCAGCTCAC-TGGAAAAGA--CCCCCAGTG-GATCAGCAATGTCTAAC-TGGGC-AGTC-GGCAAG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35104766 446 + 104879549 CAGAATCTGGGGAAATACTTCCTGTGAAGACAGGAGAAAAAAATGAGAGTTTCTGGAAGAGACGTAGAAAGATCACTTGGAGCAGGG---------GTAGAAGGAGAAAGAGAA-------------TGACACATCCTAG-------AAGGCAGTG--GGGTGGAGGGA-GCCT-GGAGGGGCTGGTCTGCCACACCA-------------AATGCTAG------GG-AGGACTCGGAA-GCAAAGAAACATCTGATCTGGT----------------------------------------ATTTGGAGGCCAAAGATACCAT-GCATGGAGTCAATTAAGC-AGGCAACTGATTGGCCCT-GTTTCTCCATCTGAGAATTGAAGGGCTTGGAT--AAGACCAGAAAAAGG-CACAAGGTGCATCTTGAAAGAGCAGCCATGCATCACGCCGCCTGCCTG-AGTACGGT---------GCCTAAAGCTATACCTCAGCTCAC-TGGGAAAGGCCTCCACAATG-GATCAGCAACGTCTGCCTTGGGCAAAA--GGCAAG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73899908 445 - 130959383 CAGAATCTGGGGAAATACTTCCTGTGAAGACAGGAGAAAAAAAT--GAGTTTCTGGAAGAGACACAGAAAGATCACTCGGAGCAGGG---------GTAGGAGGAGCAAGAGAA-------------TGATGCATCCTAG-------AAGGCAATG--GGGTGGAGGGA-GCCT-GGAGGGGCTGGTCTGCCACACCA-------------AATGCCAG------GG-AGGACTTGGAA-GCAAAGAAACATCTGATCTGGTC---------------------------------------ATTTGGAGGTCAAAGATGCTAT-GCATGGAGTCAACTAAGT-AAGCAACTGATTGGCCCT-GTTTCTCCATCTGAGAATTGAAGGACTTGGAT--AAGACCAG-AAAAGG-CATAAGGTGCATCTTGAAAGAGCAGCCATGCATCGCACCCCCTGCCTG-AGTACTGT---------GCCTAAAGCCATACCTCAGCTCAC-TGGGAAAGGA-CCCACAATG-GATTAGCAACTTCTGCCTTGGGCAAGTCAGGCAAG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75460228 445 - 133195287 CAGAATCTGGGGAAATACTTCCTGTGAAGACAGGAGAAAAAAAT--GAGTTTCTGGAAGAGACACAGAAAGATCACTCGGAGCAGGG---------GTAGGAGGAGCAAGAGAA-------------TGATGCATCCTAG-------AAGGCAATG--GGGTGGAGGGA-GCCT-GGAGGGGCTGGTCTGCCACACCA-------------AATGCCAG------GG-AGGACTTGGAA-GCAAAGAAACATCTGATCTGGTC---------------------------------------ATTTGGAGGTCAAAGATGCTAT-GCATGGAGTCAACTAAGT-AAGCAACTGATTGGCCCT-GTTTCTCCATCTGAGAATTGAAGGACTTGGAT--AAGACCAG-AAAAGG-CATAAGGTGCATCTTGAAAGAGCAGCCATGCATCGCACCCCCTGCCTG-AGTACTGT---------GCCTAAAGCCATACCTCAGCTCAC-TGGGAAAGGA-CCCACAATG-GATTAGCAACTTCTGCCTTGGGCAAGTCAGGCAAG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73323538 445 - 125196307 CAGAATCTGGGGAAATACTTTCTGTgaagacaggagaaaaaaat--gagtttctggaagagacacagaaagatcACTCGGAGCAGGG---------GTAGGAGGACCAAGAGAA-------------TGATGCATCCTAG-------AAGGCAATG--GGGTGGAGGGA-GCCT-GGAGGGGCTGGTCTGCCACACCA-------------AATGCCAG------GG-AGGACTCGGAA-GCAAAGAAACATCTGATCTGGTC---------------------------------------ATTTGGAGGTCAAAGATGCTAT-GCATGGAGTCAACTAAGT-AGGCAACTGATTGGCCCT-GTTTCTCCATCTGAGAATTGAAGGACTTGGAT--AAGACCAG-AAAAGG-CATAAGGTGCATCTTGAAAGAGCAGCCATGCATCGCACCCCCTGCCTG-AGTACTGT---------GCCTAAAGCCATACCTCAGCTCAT-TGGGAAAGGA-CCCACAATG-GATTAGCAACTTCTGCCTTGGGCAAGTCAGGCAAG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72156411 444 - 125710982 CAGAATCTGGGGAAATACTTCCTGTGAAGACAGGAGAAAAAAAT--GAGTTTCTGGAAGAGACACAGAAAGATCACTTGGAGCAGGA---------CTAGGAGGAGCAAGAGAA-------------TGATGCATCCTAG-------AAGGCAATG--GGGTGGAGGGA-GCCT-GGAGGGGCTGGTCTGCCACACCA-------------AATGCCAG------GG-AGGACTCGGAA-GCAAAGAAACATCTGATCTGGTC---------------------------------------ATTTGGAGGTCAAAGATGCTAT-GCATGGAGTCAACTAAGT-AGGCAACTGATTGGCCCT-GTTTCTCCATCTGAGAATTGAAGGGCTTGGAT--AAGACCAG-AAAAGG-CATAAGGTGCATCTTGAAAGAGCAGCCTTGCATCGCACCCCCTGCCTG-AGTACTGT---------GCCTAAAGCCATACCTCAGCTCAT-TGGGAAAGGA-CCCACAATG-GATTAGCAACTTCTGCCTTGGGC-AGTCAGGCAAG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75615721 426 - 121768101 CAGAATCCAGGGAAATGCCTCCTATGAAGACAGGAGAAAAAAATGAGAGTTTCTGGAATAGACACAGGAAGATCATTCAGAGCAGGG---------GTAGGAGGAGCAAGACAA-------------TGATGCATCCTAG-------AAGGCAACA--GGATGGATGGA-GGCT-GGAGGGGCTGGTGTGCCACACCA-------------AATGCTAG------GG-AGAACTCAGAA-GGAAAGAAACATCTGATCTGGTC---------------------------------------ATT-----------------------TGGAGTCGATTAAGT-AGGCAACTGATTGGCCCC-GTTTCTCCATCTGAGAATTGAAGGGCTTGGAT--AACACCAG-AAAAGC-CACAAGGTGCATCTTGAAGGAGCAGCTAGGCCTCGAGCTGCCTGCCTG-AGTACTGT---------GCCTAAAGTCATACCTGAGCTCAC-TGGGATAGGAGCCCACAATG-GAGCAGCAACGTCTGCCTTGGTCAAGTCAGGCAAG i calJac3.chr12 C 0 C 0 s mm10.chr14 24212149 519 + 124902244 CAGACTTCCAGGAAATAC-GCCTATGAAGGCAGGAGAAAGAC----GACTTTCTGGAAGAGGCATAGAAAGA--------AGGAGAGCGAAATGTTCTAGAAGGCACCAGAGAGAGCTTGAGAGGgctgat-catcccagtgctagagaagcagagacaggtggatggatgcctgggactcactggccagccagtccaccctactcaagccaactccaggccactga-gagaccctctc-tcacaggagcttgtcctcgggcctccacgcccacacacatgtgcaAAAGATGCTTGAGTTAGACCCGAAAGTCAGAGATGCTCTCCCAAAGACGCAGTTAAGT-AGATGATTAATTGGCTTTCATTTTCCCACCAGGGACAGAAAGAGTTTATATTAAAAACTAG-AAACCA-AA-AGGGGGCATCTAGAAAGAACCGCTATGC--------CCCTGTCTGAAGCGCTAT---------GCTCAAAACGA---CTGAGCACACATCTGAAAGGG-AGCCCGGTGCTATTAGTGATCTCTATCGTGGGCAAGATGGAGAAC i mm10.chr14 I 15 C 0 s canFam3.chr4 27771309 448 + 88276631 CAAAATTCTGGGATGGACACCCTGTGAGAACAGGAGAAGGAA-TAAAAATATCTGGAAGAGACACAG--AGGCCATTCAG---GAGG---------ACAGGAGGAACAAGAGAA-------------TGAAATCTTCTAG-------ACGGCAACG--GGGAGGAAAGT-GGCC-AGAGGGGCTGGTCTGCCAAACCA-------------AACACTGG------GGTAGGGCAGGGAAGGCAAAGAAACGTCTGGTGTGGTC---------------------------------------ATCCGGAGGTCAACAACGCTCT-GC-------CAATTAAGTAAGGCCATTGATTGGCTCTGGTTTCTCCATC--AGAATTGATGAGCTTGGAT--TAGACCAG-ATAAGGCCAAGAGGTTCATCGCAGAGGAACTGCCCTGTCTCGTGACAActgcccagagtaccgtgttaaaagagcttgaggccacacctgcgcttgt-cgggaaaggagcccatgatg-gattagctgcgtctgctgagggcatgatgggaagg i canFam3.chr4 C 0 I 878 a score=288473.000000 s hg38.chr10_KI270825v1_alt 123169 92 + 188315 AGTATCTCATCCCCGGAGCACATTGTTTCTACAGACCTG-TCCACCTCCAGAGACATGGTTCATGGTGGTCGGCACTTAGCAGGCTTCCCGTA s panTro4.chr10 76500597 92 + 133524379 AGTATCTCATCCCCGGAGCACATGGTTTCTACAGACCTG-TCCACCTCCAGAGACATGGTTCATGGTGGTCGGCACTTAGCAGGCTTCCCGTA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76170327 91 - 133410057 AGTACCTCATCCCTGGAGCACAT-GTTTCTACAGGCCGG-TCCACCTCCAGAGACATGGTTCATGGTGGTCGGCACTTAGCAGGCTTCCTGTA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35105212 92 + 104879549 AGTACCTCATCCCTGGAGCACATGGTTTCTACAGGCCGG-TCCACCTCCAGAGACATGGTTCATGGTGGTCGGTGCTTAGCAGGCTTCCTGTA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73900353 92 - 130959383 AGTACCTCATCCCTGGAGCGCATGGTTTCTACAGGCCGG-TCCACCTCCAGAGACATGGTTCACAGTGTTCGGCGCTTAGCAGGCTTCCTGTA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75460673 92 - 133195287 AGTACCTCATCCCTGGAGCGCATGGTTTCTACAGGCCGG-TCCACCTCCAGAGACATGGTTCACAGTGGTCGGCGCTTAGCAGGCTTCCTGTA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73323983 92 - 125196307 AGTACCTCATCCCTGGAGCGCATGGTTTCTACAGGCCGG-TCCACCTCCAGAGACATGGTTCACAGTGGTCAGCGCTTAGCAGGCTTCCTGTA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72156855 92 - 125710982 AGTACCTCATCCCTGGAGCGCGTGGTTTCTACAGGCCGG-TCCACCTCCAGAGACATGGTTCACAGTGCTCGGCGCTTAGCAGGCTTCCTGTA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75616147 91 - 121768101 TGCACCTCAT-CCTGGAGCGTGTGGTTTCCACAGGCCGG-TCCACCTCCAGAGACATGGCTCACAGTGGCCGGTGCTTAGCAGGCTTCCCATG i calJac3.chr12 C 0 C 0 s mm10.chr14 24212668 84 + 124902244 TGAGTGTCACTCCTGG--------GTTTCTATGGGCTGGCCCCGCCTCCAGAAGC-TATTTTAAAGTATATAGTGCTCAGTAGGCTCACTATA i mm10.chr14 C 0 C 0 e canFam3.chr4 27771757 878 + 88276631 I a score=199613.000000 s hg38.chr10_KI270825v1_alt 123261 49 + 188315 ATTAATTACTGATTGGAATTAAACTCTGCAATCTAATCTGTGTCTCTGA s panTro4.chr10 76500689 49 + 133524379 ATTAATTACTGATTGGAATTAAACTCTGCAATCTAATCTGTGTCTCTGA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76170418 49 - 133410057 ATTAATTACTGATTGGAATTAAACTCTGCAATCTAATCTGTGTCTCTGA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35105304 49 + 104879549 ATTAATTACTCATTGGAATTAAACTCTGCAATCTAATCTGTGTCTCTGA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73900445 49 - 130959383 ATTAATTACTGGTTGGAATTAAACTCTGCAATCTAATCTGTGTCTCTGA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75460765 49 - 133195287 ATTAATTACTGATTGGAATTAAACTCTGCAATCTAATCTGTGTCTCTGA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73324075 49 - 125196307 ATTAATTACTGATTGGAATTAAACTCTGCAATCTAATCTGTGTCTCTGA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72156947 49 - 125710982 ATTAATTACTGATTGGAATTAAACTCTGCAATCTAATCTGTGTCTCTGA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75616238 49 - 121768101 ATTAATCACTGATTGGAATTAAACTCTGCAATCTAATCTGTGTCTCTGA i calJac3.chr12 C 0 C 0 s mm10.chr14 24212752 48 + 124902244 ATTAATTGCTAATTGGAATTAAACTCCAAAATCCAATCTGT-TCTCCAA i mm10.chr14 C 0 I 180 s canFam3.chr4 27772635 46 + 88276631 atgaataaataaatgaaatc---ttttaagaTCCAATCTGTTTCTTCAA i canFam3.chr4 I 878 C 0 a score=607665.000000 s hg38.chr10_KI270825v1_alt 123310 182 + 188315 CATCCTTTAAATGACTGTGACTCAAGGAGCGCTCAGGGAAAAATAAAAGGACAATTATCTTTTTTCCATCGACTTCTTTTGAGGCCCCGAGAAACAGAAAGTCT----GAGAGTTTGGCTATCAGAGGCGCTCTGGGCAGCCCTGCCCAAAGCAGATGATCCTCCAAT-CCAAGACGGGCCCTCAGA s panTro4.chr10 76500738 182 + 133524379 CATCCTTTAAATGACTGTGATTCAAAGAGCGCTCAGGGAAAAATAAAAGGGCAATTATCGTTTTTCCATCGACTTCTTTTGAGGCCCCGAGAAACAGAAAGTCT----GAGAGTTTGGCTATCAGAGGCGCTCTGGGCAGCCCTGCCCAAAGCAGATGATCCTCCAAT-CCAAGACGGGCCCTCAGA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76170467 182 - 133410057 CATCCTTTAAATGACTGTGATTCAAAGAGCACTCAGGGAAAAATAAAAGGGCAATTATCTTTTTTCCATCGACTTCTTTTGAGGCCCCGAGAAACAGAAAGTCT----GAGAGTTTGGCTATCAGAGGCGCTCTGGGCGGCCCTGCCCAAAGCAGATGATCTTCCAAT-CCAAGACGGGCCCTCAGA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35105353 183 + 104879549 CATCCTTTAAATGACTGTGATTCAAAGAGCGCTCAGGGAAAAATAAAAGGGCAATTATCTTTTTTCCATCGACTTCTTTTGAGGCCCCGAGAAACAGAAAGTCT----GAGAGTTTGGCTATCAGAGGCGCTCTGGGAGGCCCTGCCCAAAGCAGATGATCCTCCAATCCCAAGACGGGCCCTCAGA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73900494 182 - 130959383 CATCTTTTAAATGACTGTGATTCAAAGAGCGCTCGGGGAAAAATAAAAGGGCAATTATCTTTTTTCCATCGACTTCTTTTGAGGCCCCGAGAAAGAGAAAGCCT----TAGAGTTTGGCTATCAGAGGCTCTCTGGGAGGCCCTGCCTGAAGCAGATGATCCTCCAAT-CCAAGATGGGCCCTCAGA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75460814 182 - 133195287 CATCTTTTAAATGACTGTGATTCAAAGAGCGCTCGGGGAAAAATAAAAGGGCAATTATCTTTTTTCCATCGACTTCTTTTGAGGCCCCGAGAAAGAGAAAGCCT----TAGAGTTTGGCTATCAGAGGCTCTCTGGGAGGCCCTGCCTGAAGCAGATGATCCTCCAAT-CCAAGATGGGCCCTCAGA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73324124 180 - 125196307 CATCCTTTAAATGACTGTGATTCAAAGAGTgctcagggaaaaataaaagggcaATTATCTTTTTTCCATTGACTTCTTTTGAGGCCCCGAGAA--ACAAAGTCT----TAGAGTTTCGCTATCAGAGGCTCTCTGGGAGGCCCTGCCTGAAGCAGATTATCCTCCAAT-CCAAGATGGGCCCTCAGA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72156996 182 - 125710982 CATCTTTTAAATGACTGTGATTCAAAGAGCGCTCAGGGAAAAATAAAAGGGCAATTATCTTTTTTCCATCGACTTCTTTTGAGGCCCCGAGAAAGAGAAAGCCT----TAGAGTTTGGCTATCAGAGGCTCTCTGGGGGGCCCTGCCTGAAGCAGATGATCCTCCAAT-CCAAGATGGGCCCTCAGA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75616287 182 - 121768101 CATCCTTTAAATGACTGGGATTGAAAGAGTGCTCAGGGAAAATTAAAAGGACAATTCCCCTTTTTCTACTGACTTCTTTTAAGGCCCCACGAAACAGAAAGTCT----GAGAGCTTGACTATCAGAGGTGCCCTGGGATGCCCTGCCCAAAGCAGATGATCCTTCAGT-CAGAGATGGGCCCTCAGA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27772681 186 + 88276631 CATTCTTTAAAGGACCAGGACCGAAAGGGCCCTCAGAGGTAAATAAAAGAACAGTGATCTCCCACGTATTCTTTTCTTTTGAGGCTCTGAGAAACAGAGAATGTAAAGAAGGGTTTGGCCCTTCAGGGGGTTCTGGGAGGCCCAGACCAGAGCAGATGGTTTTCCTAt-ccaaggagagccctagga i canFam3.chr4 C 0 I 158 e mm10.chr14 24212800 180 + 124902244 I a score=153167.000000 s hg38.chr10_KI270825v1_alt 123492 50 + 188315 TGTTCCAA------------------------------------------------------------------ACATGCTTCCTCTCCGATAAAGTAACACCGTCCAGGAGGGTT s panTro4.chr10 76500920 50 + 133524379 TGTTCCAA------------------------------------------------------------------ACATGCTTCCTCTCCGATAAAGTAACACCATCCAGGAGGGTT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76170649 50 - 133410057 TGTTCCAA------------------------------------------------------------------ACATGCTTCCTCTCCGATAAAGTAACACCGTCCAGGAGGGTT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35105536 50 + 104879549 CGTTCCAA------------------------------------------------------------------ACATGCTTCCTCTCTGATAAAGTAACACCGTCCAGGAGGGTT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73900676 50 - 130959383 TGTTCCAA------------------------------------------------------------------ACATGCTTCCTCTCCGATAAAGAAACACCGTCCAGGAGGGTC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75460996 50 - 133195287 TGTTCCAA------------------------------------------------------------------ACATGCTTCCTCTCCGATAAAGAAACACCGTCCAGGAGGGTC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73324304 50 - 125196307 TGTTCCAA------------------------------------------------------------------ACATGCTTCCTCTCCGATAAAGAAACACCGTCCAGGAGGGTC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72157178 50 - 125710982 TGTTCCAA------------------------------------------------------------------ACATGCTTCCTCTCCGATAAAGAAACACCGTCCAGGAGGGTC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75616469 50 - 121768101 TGTTCCAA------------------------------------------------------------------ACATGCCTCCTCTCCGATACGGTAACACCATGCAGAAGGGTT i calJac3.chr12 C 0 C 0 s canFam3.chr4 27773025 116 + 88276631 cgctctaataaacaaataaaatcttaaaaaaaaaaaaaaaaaagaAGAAGAAGAAGAGCCCTAGAACACTTTATGCACCCTTCCTCTAGAATAAGGGGACACCAGACAGGAAGGTT i canFam3.chr4 I 158 C 0 e mm10.chr14 24212800 180 + 124902244 I a score=2534461.000000 s hg38.chr10_KI270825v1_alt 123542 742 + 188315 -CACCCTCATTTTCACAGTACTCGGTGTGCATTTTGG-AAATGGCGGACTTCAGAA------GT-------------CCATTCCTGAAACTGCTGGGACTCTTTCCAATGTTTTACAGAAAGGAC-GCTGCACACACTTACCTGCAGACATCCACTGAGGTAT----CCAACGCTCACCTTTGTCACACCCAGAGCAGGAGT--------GAGCTTTTAAATGAGACTTTGG--------------GTACT-ATACACTCAGGC------------------TGTCA----------------CCTCCTATCCCCCCACAAATAAAGATAAAACAGCACAAGCATTCTTCGCCCTAAAA--CCCTATAGC-AAG-----CTTTCATCATGACCCA-TTCCACACCTG-----TCATCTCAGTACATTCAAGTGCTCACATGGGCCCTCAGCTAGAGCATGAGCCCATTCTTAGATGCCTACGCTCAGAAAACAGGCCCATGCTACTCTTTGT-TTAAATGCAGAAAGAGGAGCTCCCCCTAAAACACTCC----AAGC-AAAATCTGGACACACAATGCCTTCAAATTGCCCCAAGTCAACCACAGAAAATGGAAGAGGAGATCACAG-AAGGATTTCAAATGCATAAAGGGATGTAGATTATCTTTCACACGTGGGCAATGCT----CAGAAAAG-----TTGATCTTGAGTAACGAGGGAAAATATTTCATTCACTATCTTGTGCAAAGAGAAAAAAACC-------AAAATCCACATCCACGACCCTGGAGTACAGCAAATGGAATCAAAGTGTGCCAGCCCCCAAAGAT---TCCAGCC--TCCTGC-AGCTC-------CTGACCCTCTG s panTro4.chr10 76500970 742 + 133524379 -CACCCTCATTTTCACAGTACTCGGTGTGCATTTTGG-AAATGGCGGACTTCAGAA------GT-------------CCATTCCTGAAACTGCTGGGACTCTTTCCAATGTTTTACAGAAAGGAC-GCTGCACACACTTACCTGCAGACATCCACTGAGGTAT----CCAACGCTCACCTTTGTCACACCCAGAGCAGGAGT--------GAGCTTTTAAATGAGACTTTGG--------------GTACT-ATACACTCAGGC------------------TGTCA----------------CCTCCTATCCCCCCACAAATAAAGATAAAACAGCACAAGCATTCTTCGCCCTAAAA--CCCTACAGC-AAG-----CTTTCATCATGACCCA-TTCCACACCTG-----TCATCTCAGTACATTCAAGTGCTCACATGGGCCCTCAGCTAGAGCATGAGCCCATTCTTAGATACCTACGCTCAGAAAACAGGCCCATGCTACTCTTTGT-TTAAATGCAGAAAGAGGAGCTCCCCCTAAAACACTCC----AAGC-AAAATCTGGACACACAATGCCTTCAAATTGCCCCAAGTCAACCACAGAAAATGGAAGAGGAGATCACAG-AAGGATTTCAAATGCATAAAGGGATGTAGATTATCTTTCACATGTGGGCAACGCT----CAGAAAAG-----TTGATCTTGAGTAACGAGGGAAAATATTTCACTCACTATCTTGTGCAAAGAGAAAAAAACC-------AAAATCCACATCCAAGACCCTGGAGTACAGCAAATGGAATCAAAGTGTGCCAGCCCCCAAAGAT---TCCAGCC--TCCTGC-AGCTC-------CTGACCCTCTG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76170699 745 - 133410057 -CACCCTCATTTTCACAGTACTCGGTGTGCATTTTGG-AAATGGTGGCCTTCAGAA------GT-------------CCATTCCTGAAACTGCTGGGACTCTTTCCAATGTTTTACAGAAAGGAC-GCTGCACACACTTACCTGCAGACATCCACTGAGGTAT----CCAACACTCACCTTTGTCACACCCAGAGCAGGAGT-----GAGGAGCTTTTAAATGAGACTTTGG--------------GTACT-ATACACTCAGGC------------------TGTCA----------------CCTCCTATCCCCCCGCAAATAAAGATAAAACAGCACAAGCATTCTTCGCCCTAAAA--CCCTACAGC-AAG-----CTTTCATCATGACCCA-TTCCACACCTG-----TCATCTCAGTACATTCAAGTGCTCATATGGGCCCGCAGCTAGAGCATGAGCCCATTCTTAGATACCTATGCTCAGAAAACAGGCCCATGCTACTCTTTGT-TTAAATGCAGAAAGAGGAGCTCCCCCTAAAACACTCC----AAGC-AAAATCTGGACACACAATGCCTTCAAATTGCCCCAAATCAACCATAGAAAATGGAAGAGGAGATCACAG-AAGCATTTCAAATGCATAAAAGGATATAGATTATCTTTCACACGTGGGCAACCCT----CAGAAAAG-----TTGATCTTGAGTAACAAGGGAAAATATTTCATTCACTCTCTTGTGCAAAGAGAAAAAAACC-------AAAATCCACATCCACAACCCTGGAGTACAGCAAATGGAATCAAAGTGTGCCAGCCCCCAAAGAT---TCCAGCC--TTCTGC-AGCTC-------CTGACCCTCTG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35105586 734 + 104879549 -CACCCTCATTTTCACAGTACTCGGTGTGCATTTTGG-AAACGGTGGCCTTCAGAA------GG-------------CCATTCCTGAAACTGCTGGGACTCTTTCCAATGTTTTACAGAAATG-------------TTTACCTGCAGACATGCACTGAGGTAT----CCAACGCTCACCTTTGTCACACCCAGAGCAGAAGT-----GAAGAGCTTTTAAATGAGACTTTGG--------------GTACTAATACACTCAGGC------------------TGTCA----------------CCTCCTATCCCCCCGCAAATAAAGATAAAACAGCACAACCATTCTTCGCCCTAAAA--CCCTACAGC-AAG-----CTTTCATCATGACCCA-TTCCACACCTG-----TCATCTCAGTACATTCAAGTGCTCACATGGGCCCTCAGCTAGAGCATGAACCCATTCTTAGATACCTACGCTCAGAAAACAGGCCCATGCTACTCTTTGT-TTAAATGCAGAAAGAGGAGCTCCCTCTAAAACACTCC----AAGC-AAAATCTGGACACACACTGCCTTCAAATTGCCCCAGGTCAACCACAGAAAATGGAAGAGGAGATCACAA-AAGCATTTCAAATGCATAAAAGGATGTAGATTATCTTTCACACATGGGCAACCCT----CAGAAAAG-----TTGATTTTGAGTAACAAGGGAAAATATTTCATTCACTATCTTGTGCAAAGAGAAAAAAATG-------AAAATCCACATCCATGACCCTGGAGTACAGCAAATGGAATCAAAGTGTGCCAGCCCCCAAAGAT---TCCAGCC--TCCTGC-AGCTC-------CTGACCCTCCG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73900726 745 - 130959383 -CACCCTCATTTTCACAGTACTTGGTGTGGATTTTGG-AAACAGTGGCCTTCAGAA------GT-------------CCATTCCTGAAACTGCTAGGACTCTTTACAATGTTTTACAGAAAGGAC-GCTGCACACACTCACCTGCAGACATCCACTGAGGTAT----CCAACGTTCACCTTTGTCATACCCAGAGCAGGAAT-----GAGGAGCTTTTAAATAAGACTTTGG--------------GTACTAATACACTCAGGC------------------TGTCA----------------CCTCCTATCCCCCCGCAAATAAAGATAAAACAGCACAAGCATTCTTCACCCTAAAA--CCCCACAGCAAAG-----CTTTCATCATGACCCA-TTCCACACCTG-----TCATCTCAGTACATTCAAGTGCTCACATGGGCCTTCAG-TTGAGCACAAGCCCATTCTTAGCTACCTGTGCTCAGAAAACAGGCCCATGCTACTCTTTGT-TTAAATGCAGAAACAAGAGCTCCCCCTAAAACACTCC----AAGC-AAAATCTGGACACACAACGCCTTCAAATTGCCCCAAGTCAACCACAGAAAATGGAAGAGGAGATCACAG-AAGCATTTCAAATGCACAAAAGGATGTAGATTATCTTTCACACATGGGTAACCCT----CAGAAAAG-----TTGATCTTGAGTAACAAGGGAAAATATTTCATTCGCTATCTTGTGCAAAGAG-AAAAAACC-------AAAATCCATATCCATGACTCCGGAGTACAGCAAATGGAATCAAAGTGTGCCAGCCCCCAAAGAT---TTCAGCC--TCCTGC-AGCTC-------CTGACCCTCTG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75461046 745 - 133195287 -CACCCTCATTTTCACAGTACTTGGTGTGGATTTTGG-AAACAGTGGCCTTCAGAA------GT-------------CCATTCCTGAAACTGCTAGGACTCTTTACAATGTTTTACAGAAAGGAC-GCTGCACACACTCACCTGCAGACATCCACTGAGGTAT----CCAACGTTCACCTTTGTCATACCCAGAGCAGGAAT-----GAGGAGCTTTTAAATAAGACTTTGG--------------GTACTAATACACTCAGGC------------------TGTCA----------------CCTCCTATCCCCCCGCAAATAAAGATAAAACAGCACAAGCATTCTTCACCCTAAAA--CCCCACAGCAAAG-----CTTTCATCATGACCCA-TTCCACACCTG-----TCATCTCAGTACATTCAAGTGCTCACATGGGCCTTCAG-TTGAGCACAAGCCCATTCTTAGCTACCTGTGCTCAGAAAACAGGCCCATGCTACTCTTTGT-TTAAATGCAGAAACAAGAACTCCCCCTAAAACACTCC----AAGC-AAAATCTGGACACACAACGCCTTCAAATTGCCCCAAGTCAACCACAGAAAATGGAAGAGGAGATCACAG-AAGCATTTCAAATGCACAAAAGGATGTAGATTATCTTTCACACATGGGTAACCCT----CAGAAAAG-----TTGATCTTGAGTAACAAGGGAAAATATTTCATTCGCTATCTTGTGCAAAGAG-AAAAAACC-------AAAATCCATATCCATGACTCCGGAGTACAGCAAATGGAATCAAAGTGTGCCAGCCCCCAAAGAT---TTCAGCC--TCCTGC-AGCTC-------CTGACCCTCTG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73324354 746 - 125196307 -CACCCTCATTTTCACAGTACTTGGTGTGGATTTTGG-AAACAGTGGCCTTCAGAA------AT-------------CCATTCCTGAAACTGCTAGGACTCTTTACAATGTTTTACAGAAAGGAC-GCTGCACACACTCACCTGCAGACATCCACTGAGGTAT----ACAAGGTTCACCTTTGTCACACCCAGAGCAGGAAT-----GAGGAGCTTTTAAATAAGACTTTGG--------------GTACTAATACACTCAGGC------------------TGTCA----------------CCTCCTATCCCCCCGCAAATAAAGATAAAACAGCACAAGCATTCTTCACCCTAAAA--CCCCACAGCAAAG-----CTTTCATCATGACCCA-Ttccacacctg-----tcatctcagtaCATTCAAGTGCTCACATGGGCCTTCAGCTTGAGCACGAGCCCATTCTTAGCTACCTGTGCTCAGAAAGCAGGCCCATGCTACTCTTTGT-TTAAATGCAGAAACTAGAGCTCCCCCTAAAACACTCC----AAGC-AAAATCTGGACACACAACGCCTTCAAATTGCCCCAAGTCAACCACAGAAAATGGAAGAGGAGATCACAG-AAGCATTTCAAATGCACAAAAGGATGTAGATTATCTTTCACACATGGGTAACCCT----CAGAAAAG-----TTGATCTTGAGTAACAAGGGAAAATATTTCATTCACTATCTTGTGCAAAGAG-AAAAAACC-------AAAATCCACATCCATGATTCCGGAGTACAGCAAATGGAATCAAAGTATGCCAGCCCCCAAAGAT---TTCAGCC--TCCTGC-AGCTC-------CTGACCCTCTG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72157228 746 - 125710982 -AACCCTCATTTTCACAGTACTTGGTGTGGATTTTGG-AAACAGTGGCCTTCAGAA------GT-------------CCATTCCTGAAACCGCTAGGACTCTTTACAATGTTTTACAGAAAGGAC-ACTGCACACACTCACCTGCAGACATCCACTGAGGTAT----CCAAGGTTCACCTTTGTCATACCCAGAGCAGGAAT-----GAGGAGCTTTTAAATAAGACTTTGG--------------GTACTAATACACTCAGGC------------------TGTCA----------------CCTCCTATCCCCCCGCAAATAAAGATAAAACAGCACAAGCATTCTTCACCCTAAAA--CCCCACAGCAAAG-----CTTTCATCATGACCCA-TTCCACACCTG-----TCATCTCAGTACATTCAAGTGCTCACATGGGCCTTCAG-TTGAGCACGAGCTCATTCTTAGCTACCTGTGCTCAGAAAACAGGCCCATGCTACTCTTTGT-TTAAATGCAGAAACAAGAGCTCCCCCTAAAACACTCC----AAGC-AAAATCTGGACACACAACGCCTTCAAATTGCCCCAAGTCAACCACAGAAAATGGAAGAGGAGATCACAG-AAGCATTTCAAATGCACAAAAGGATGTAGATTATCTTTCACACATGGGTAACCCT----CAGAAAAG-----TTGATCTTGAGTAACAAGGGAAAATATTTCATTCACTATCTTGTGCAAAGAGAAAAAAACC-------AAAATCCACATCCATGATTCTGGAGTACAGCAAATGGAATCAAAGTATGCCAGCCCCCAAAGAT---TTCAGCC--TCCTGC-AGCTC-------CTGACCCTCTG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75616519 692 - 121768101 -CACCCTCATTTCCACAGAACTTGGTGTGGATTTTGGAAAACCATGGCCTTCAGAA------GT-------------CCATTCCTGAAACTGCTGGGACCCCTTATGACGTTTCATAAAAAGGAT-GCTGCACACACTCACCTGCAGGTATCCACTGAGGTATCACACCAACACTCACCTTTGTCACACCCAGAGCTGGAGT-----GAGGACCTTTTAAATGAGGCTTTGG--------------GCACTAACACACTCAGGC------------------TGTCA----------------CCTACCCCCCCC-------------------------AGCGTTCTTTGCCCT-AAA--CATCACATCAAAG-----CTTCCATCACGGCCTG-TTCCACCCCTG-----TCATCTCAGTACATGCAAGTGCTCACA-------------------------------TAGACACCTATACTCAGAAAATAGGCCCATG-----TTTTGC-TTAAAGGCAGAAAGAAGAGCTCCCCCGAAAACACTCC----AAGC-AAAATCTGGACACACAATGCCTTCGAATTGCCCCAACCAGACCACAGAAAATGGAAGAGGAGATCAGAG-AAGCATTTCAAATGCATAGAAGGATGTAGATTACCTTTCACACATGGACAACCCT----CAGAAAAG-----TTGATCTTGAGTAACAAAAGAAAATATTTCATTCCGTATCTTGTGCCAAGAG-AAGAAACC-------AAAATCCACATCCACGACCCCAGAGTACAGCAAATGGAATCAAAGTGTGCCAGCCCCCAAAGATTCCTCCTGCC--TTCTGC-AGCTC-------CTGACCCTCTG i calJac3.chr12 C 0 C 0 s mm10.chr14 24212980 748 + 124902244 -cACTCCCAATTATCTAGCGCCTGGCATGAATTCTC--AAACAGTAGCCTCCAGAGAACAGCAG-------------CCATTCCCAAAACTGC-AGGAC-----ACAATGACTCGTAGAG-------------------CCCTGCACAAATCCACTTAGCTCT----CCCAGGTT---TTCTCTCACAGC---AGCAGGAGTTTCCGGGTGAGCACTGAGCAAGGGGCTGCC--------------ACACCCACACACTCAGGCAGGGGCTAAGGCTATACAGGTCA----------------CCGTCCAGCCCCAC-CAAAGCAGGGTGATACACCGTGAACAACCACCTCCCTAAAG--CCCCG-AGCAAAG-----CTTCTATCAAGTTCCA-ATTT-CACCTAATGATCTATCTCAGTG-GCCCAAGTGCTCACTGTGATCC-------AAGGACATGGCCAATCTCATCCTCCAGGGACCAGCTGACAGGGCCA-GCCACTCCTGGGAAGGAGTACAGAAAACAGAGTGCCTCT--GCCCATCTC----AGGCAAAAATCTGGCCCCACCA-GTCTTCAGATTGCCCAGACAGAACCACAGGAAATGGGGAAGGGGA--GCAG-AAGTATTTCAAATGCGCAAGAGGATGTGGGTTATCTTTTTTACATGGG--GCCCTAGGGAGGGAGGG-----TTGATCTTGTGCAATAAGTGAAAATATT----TCCGTATTTTGTGTAGAAAG-AAAAAATCAAAACCAAAAACCCACATCTGCAACCACAAAGGGCAGCAAATGAAACCACAGTATGCCAGTCCCCAGAGAC---TCAAAGCAATCCTAT-GGCTTGAGCTTATTGGCCCTCTG i mm10.chr14 I 180 I 68 s canFam3.chr4 27773141 752 + 88276631 CACCCCTTACTTACCCAGCACCCTGTGTGGATTTTG--AAAAGGTGGCCTCCAGAA------GTGGGTGGAAAGAACCCATTCCTGAAACCACAGGGACCTTTTACACTGTATTACAAGAAGAACAGCTGCACGTACTCGTCTACAGAAATGCACTCAGGTAT----GACATGCT---------CACAGCCAGGGCAGGGGT-----GGGGAGTTTCTAAACAACACCCAGGGCCACAGACACACTGCACCAGCACACTCAGGC------------------AGTGAGTGTTCCTCTTGGCAGCCACCCCACTCCCACCAAATAAAGA------------AACATCTTTCTTCCTAAAAACCCCTGTAACAAAGGCTTCCTTCCATCATGTTCTAGTTTCACACCTA-----CTATTTCAGC-CAATCTAGTGCTCCCATTTACCTTCAACTTGAGTGCAGAGCCAATCTCACATTCTAACATTCAG-------------GTCATTCTTTCC-TCAAATGCAGCAAGAAGAGCTTCCCC-----CACCCCCCTGAGGC-AAAATCTGGCCACACAGGGTCTTCAAAGTGCCCCAAGTCGACCTCAGGAAACGGGGGAGGAAATCAGAGAAAGTATTTCAAATGCACAAAGGGATGTGGGTTATCTTTTGCACACAGGCAGCCCT----CGGGAGAGAAAGTAAGATCTTGAGTAACGA--GAAAATATTTCA---------------AGGGAG-GAAAAGCC-------AAAATCCACATCCACAACCACAGAGCACAGCAAATGAAACCAGAGCATAGCAGCCCCCAAAGAT---CCCAGCC--TTCTCCTGGCCC-------CTGGTCCACTG i canFam3.chr4 C 0 C 0 a score=959309.000000 s hg38.chr10_KI270825v1_alt 124284 277 + 188315 GCCATTTGCAGGGAGCTCTGCAGG----------CAGTCTCATCTCAATGGACTGGG-ACCCTCCAGCCTG----CACCACTATGGCTGCTCTACTCTCCCTGCCCCCTGAGCAAGGCAAATGCTTAGTGAAAGTGTGAAGAG-TAAGAGTTGAATCTGCATTTTCTAGTCAGACTTCAGCCCTCTCATAGTTTAAGGGGCATCCCCtctaccgtccagccctgacatcctacaggtgttcagagggggcgtgactgagccaggtcacacagcaagctggtgccagtgccagg s panTro4.chr10 76501712 277 + 133524379 GCCATTTGCAGGGAGCTCTCCAGG----------CAGTCTCATCTCAATGGACTGGG-ACCCTCCAGCCTG----CACCACTATGCCTGCTCTACTCTCCCTGCCCCCTGAGCAAGGCAAATGCTTAGTGAAAGTGTGAAGAG-TAAGAGTTGAATCTGCATTTTCTAGTCAGACTTCAGCCCTCTCATAGTTTAAGGGGCATCCTCtctaccgtccagccctgacatcctacaggtgttcagagggggcatgactgagccaggtcacacagcaagctggtgccagtgccagg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76171444 277 - 133410057 GCCATTTGCAGGGAGCTCTGCAGG----------CAGTCTCATCTCAACGGACTGGG-ACCCTCCAGCCTG----CACCACTATGCCTGCTCTACTCTCCCTGCCCCCTGAGCAAGGCAAACGCTTAGTGAAAGTGTGAAGAG-TAAGAGTTGAATCTGCATTTTCTAGTCAGACTTCAGCCCTCTCATAGTTTAAGGGGTATCCCCtctaccgtccagccctgacatcctacaggtgttcagagggggcgtgactgagccaggtcacacagcaagctggtgccagtgccagg i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35106320 277 + 104879549 GCCATTTGCAGGGAGCTCTGCAGG----------CAGTCTCATCTCAATGGACTAGG-ACCCTCCAGCCTG----CACCACTATGCCTGCTCTGTTCTCCCTGCCCCCTGAGCAAGGCAAATGCTTAGTGAAAGTGTGAAGAG-TAAGAGTTGAATCTGCATTTTCTAGTCAGACTTCAGCCCTCTCATAGTTTGAGGGGCATCCCCtctactgtccagccctgacatcctacaggtgttcagagggggcgtgactgagccaggtcacacagcaagctggtgccagtgccagg i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73901471 277 - 130959383 GCCATTTGCAGCGAGCTCTGCAGG----------CAGTCTCATCTCAATGGACTGGG-ACCCTCCAGCCTG----CACCACTATGCCTGCTCTGCTCTCCCTACCCGCTGAGCAAGGCAAATGCTTAGTGAAAGTGTGAAGAG-TAAGAGTTGAATCTGCATTTTCTAGTCAGACTTCAGCCCTCTCATAGTTTAAGAGGCATCCCCTCTACTATCCAGCCCTGACATCCTAGAGGTGTTCAGAGGGGGCCTGACTGAGCCAGGTCACACAGCAAGCTGATGCCAGTGCCAGG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75461791 277 - 133195287 GCCATTTGCAGCGAGCTCTGCAGG----------CAGTCTCATCTCAATGGACTGGG-ACCCTCCAGCCTG----CACCACTATGCCTGCTCTGCTCTCCCTACCCGCTGAGCAAGGCAAATGCTTAGTGAAAGTGTGAAGAG-TAAGAGTTGAATCTGCATTTTCTAGTCAGACTTCAGCCCTCTCATAGTTTAAGAGGCATCCCCTCTACTGTCCAGCCCTGACATCCTACAGGTGTTCAGAGGGGGCCTGACTGAGCCAGGTCACACAGCAAGCTGATGCCAGTGCCAGG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73325100 277 - 125196307 GCCATTTGCAGGGAGCTCTGCAGG----------CAGTCTCATCTCAAAGGACTGGG-ACCCTCCAGCCTG----CACCACTATGCCTGCTCTGCTCTCCCTACCCACTGAGCAAGGCAAATGCTTAGTGAAAGTCTGAAGAG-TAAGAGTTGAATCTGCATTTTCTAGTCAGACTTCAGCCCTCTCATAGTTTAAGAGGCATCCCCTCTACTGTCCAGCCCTGACATCCTACAGGTGTTCAGAGGGGGCCTGACTGagccaggtcacacagcaagctgATGCCAGTGCCAGG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72157974 278 - 125710982 GCCATTTGCAGTGAGCTCTGCAGG----------CAGTTTCATCTCAATGGACTGGG-ACCCTCCAGCCTG----CACCACTATGCCTGCTCTGCTCTCTCTACCCGCTGAGCAAGGCAAATGCTTAGTGAATGTGTGAAGAGTTAAGAGTTGAATCTGCATTTTCTAGTCAGACTTCAGCCCTCTCATAGTTTAAGAGGCATCCCCTCTACTGTCCAGCCCTGACATCCTACAGGTGTTCAGAGGGGGCCTGACTGAGCCAGGTCACACAGCAAGCTGATGCCAGTGCCAGG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75617211 281 - 121768101 GCCATTTGCAGGGAGCTCTGCAGG----------CAGTCTCATCTCAATGGACTGGG-ACCCTCCAGCCTGCACCCACCACTGTGCCTGCTCTGCTCTCCCTGCCCCCTCAGCAGGGCAAATGCTCATTTAAATTGTGAAGAG-TAAGAGTTGAATCTGCATTTTCTAGTCAGACATCAGCCCTCTCATAGGTTAAGGGGCATCCCCTCTACCGTCCAGCCCTGACATCCTACAGGTATTCAGAGGCGGCCTGACTAAGCCAGGTCACACAGCAAGCTGGTGCCAGTGCCAGG i calJac3.chr12 C 0 C 0 s canFam3.chr4 27773893 273 + 88276631 GCCATCTGCTAGCAGCCCTGACAGCGAACACGTCCAGCCCCCTTCCCGTGGACAGGGCACCCCCAGGTCTG----CACCACCGTGCCTGC-----TGTCGCCAACCCTGGCACAAGCCACACAC----GGTAAGTGTGAA----TAAGTGCTCAATCCACATTTTCCAGTTA-CCTTCAGCTGCCTCAGAGCTCACGAGGA--CCCCTGGACTGCCCGGCCCTGACGTGGTACAGATGTCCAGAGGAGGTCTGGTCGAACCAGGTCACAGTGAGAGCTGGAGACGGTGCCAAG i canFam3.chr4 C 0 I 62 e mm10.chr14 24213728 68 + 124902244 I a score=2293703.000000 s hg38.chr10_KI270825v1_alt 124561 803 + 188315 agtgaaacAAGCC----CACAACTCTGATGAGCAGGATGAGAGGAGGAA-GGGGATGAAGGAAGTGCCCTCCAGCGAAGGCAAGAGTGCAGGAATCCCTAGGTAGAGAAAGGTCCCCCC-AGATAAGCACCTGGACACCCTGTGCAGGCTGTGAGAGCCAACAGAGAGGGGCAGTCGGTCAACAGAGCTTCTGGCcaatggctcccagcctggctgttcatcagaatcatccaagctgctctttaaaaatgctgGAAAAAAATAAAAATAAAAACCAAAAAT------GTCTCAGGACCCCTTCCTATCCCCAGGAATCAGCACCTCCAGCATTCCAGGCTTTTAAGATGCTGCTCAGAGTCTCTGGTGAGTGGCTCAGTTGGGGAATACCACCAGGGTCTGCACACGCACCCTGGGCTTCCTGCCCTCTGAGCTTCCTGAACACTGCCACTGACCCTCAGCCAGAAATGCTTGCCCC-CTTAGGGTACCGTTGTCACTAGAGAACCGTGTGAGAGTAGTAATGTTGCt---tttttttttttt-----ggagacagagtctcgctctgtcacccaggcta--------------gatctcagctcactgcaacctccacctcccaggttc-------------gcctcaacctcccgagtagctgggattacaggcacacaccaccaggcctggctaattttttgtatttttagtagagatggggtgtcactatgttggtcagtctggtcttgaactcc------tgacctcaagtgatctgcctgctttggcctcccaaagtgctgggattataggcgtgagccaacgcgccctgccAGTAATGCTGCTCttatg s panTro4.chr10 76501989 808 + 133524379 agtgaaacAAGCC----CACAACTCTGATGAGCAGGATGAGAGGAGGAA-GGGGATGAAGAAAGTGCCCTCCAGCAAAGGCAAGAGTGCTGGAATCCCTAGGTAAAGAAAGGTCCCCTC-AGATAAGCACCTGGACACCCTGTGCAGGCTGTGAGAGCCAACAAGGAGGGGCAGTCGGTCAATGGAGCTTCTGGCcaatggctcccagcctggctgttcatcagaatcatccaagctgctctttaaaaatgctgGAAAAAAATAAAAATAAAAACCAAAAAT------GTCTCAGGACCCCTTCCTATCCCCAGGAATCAGCACCTCCAGCATTCCAGGCTTTTAAGATGCTGCTCAGAGTCTCTGGTGAGTGGCTCAGTTGGGGAATACCACCAGGGTCTGCACACGCACCCTGGGCTTCCTGCCTTCTGAGCTTCCTGAACACTGCCACTGACCCTCAGCCAGAAATGCTTGCCCC-CTTAGGGTACCGTTGTCACTAGAGAACCGTGTAAGAGTAGTAATGTTGCt---tttttttttttttttttggagacagagtctcgctctgtcacccaggcta--------------gatctcagctcactgcaaccaccacctcccaggttt-------------gcctcaacctcccgagtagctgggattacaggcacacaccaccaggcctggctaattttttgtatttttagtagagatggggtgtcactatgttggtcagtctggtcttgaactcc------tgacctcaagtgatctgcctgctttggcctcccaaagtgctgggattataggcgtgagccaacgcgccctgccAGTAATGTTGCTCttatg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76171721 806 - 133410057 agtgaaacAAGCC----GACAACTCTAATGAGCAGGATGAGAGGAGGAA-GGGGATGAAGGAAGTGCCCTCCAGCAAAGGCAAGAGTGCTGGAATCCCTAGGTAAAGAAAGGTCCCCCC-AGATAAGCACCTGGACACCCTGTGCAGGCTGTGAGAGCCAACAGGGAGGGGCAGTCGGTCAACAGAGCTTCTGGCCAATGGCTCCCAGCCTGGCTGTTCATC--AATCATCCAAGCTGCTCTTTAAAAATGCTGGAAAAAAATCAAAATAAAAACCAAAAAT------GTCTCAGGACCCCTTCCTATCCCCAGGAATCAGCACCTCCAGCATTCCAGGCTTTTAAGATGCGGCTCAGAGTCTCTGGTGAGTGGCTCAGTTGGGGAATACCACCAGGGTCTGCACACACACCCCGGACTTCCTGCCCTCTGAGCTTCCTGAACACTGCCACTGACCCTCAGCCAGAAATGCTTGCCCC-CTTAGGGTACTGTTGTCACTAGAGAACCGTGTAAGAGTAGTAATGTTGCt---tttttttttttttttttggagacggagtctcgctctgtcacccaggcta--------------gatctcagctcactgcaacctccacctcccaggttc-------------gcctcaacctcccgagtagctgagattacaggcacacaccaccaggcctggctaattttttgtatttttagtagagacagggtgtcactatgttggtcagtctggtcttgaactcc------tgacctcaagtgatctgcctgcttcggcctcccaaagcgctgggattataagtgtgagccactgcgccctgccAGTAATGTTGCTCttacg i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35106597 799 + 104879549 agtgaaacAAGCC----AACAACTCTGATGAGCAGGATGAGAGGAGGAA-GGGGATGAAGGAAGTGCCTTCCAGCAAAGGCAAAAGCACTGGAATCCCTAGGTAAAGAAAGGTCCCCCC-AGATAAGCACCTGGACACCCTGTGCAGGCTGTGAGAGCCAACAGGGAGGGGCAGTCGGTCAACGGAGCTTCTGGTcagtggctcccagcctggctattcatcagaaccatccaagctgctctttaaaaatgctgGAAAAAAATAAAAATAAAAACCAAAAAT------GTCTCAGGACCCCTTCCTGTGCCCAGGAATCAGCACCTCCAGCATTCCAGGCTTTTAAGATGCTGCTCAGAGTCTCTGGTGAGTGGCTCAGTTGGGGTATACCACCAGGGTCTGCACACACATCCCGGGCTTCCTGCCCTCTGAGCTTCCTGAACACTGCCACTGACCCTTAGCCAGAAATGCTTGCCCC-CTTAGGGTACCGTTGTCACTAGAGAACTGTGTAAGAGTAGTAATGTTGCt---tttttttttttt-----ggagacggagt----ctctgtcacccaggcta--------------gatctcagctcactgcaacctccacctcccaggttc-------------gcctcaatctcccgagtagctgggattacaggcacacaccaccaggcatggctaattttttgtatttttagtagagatggggtgtcactatattggtcagtctggtcttgaactcc------tgacctcaagtgatctgcctgcttcagcctcccaaagtgctgggattataggcgtgagccaccgcgccctgccAGTAATGTTGCTCttatg i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73901748 796 - 130959383 AGTGAAACAAGCC----GACAACTCTGATGAGCACGATGAGAGGAGGAA-GCAGATGAAGGAAGTGACCTTCAGTGAAGGCAAGAGCGCTGGAATCCCCAGGTAAAGAAAGGTCCCCCCAAAACAAGCACCTGGACACCCTGTGCGGGCTGTGAGAGCC-ACAGGGAGGGGCAGTTGGTCAACAGGGCTTCTGGCcaatggctcccagtctggctgttcatcagaatcatccaagctgctctttaaaaatgctgGA-aaaaataaaaataaaaactaaaaat------aTCTCAGGACCCCTTCCTACCCCCAAGAATCAGCACCTCCAGCATTCCAGGCTTTTAAGATGCTGCTCAGAGTCTCTGATGAGTGGCTCAGTTGGGGAATACCACCAGGGTCTGCACACGCACCCTGGGCATCCTGCCCTCTGAGCTTCCTGAACCCTGCCACTGACCCTCAGCCAGAAAT--------------GGGCACCGTCGTCACTAGAGAACAGTGTAAGAGTAGTAATGTTGCC-tttttttttttttt------gagacggagtctcgctctgtcacccaggcta--------------gatctcagctcactgcaacctccacctcccaggttc-------------gcctcaacctcccgagtagctgggattacaggcacacgccaccaggcctggataacttttcgtaattttagtagagacggggtttcactatgttggtcagtctggtcttgaactccctcaagtgacttcaagtgatctgcttgcttcggcctcccaaagtgctgggattacaggcatgagccaccgcaccctgccAGTAATGTTGCTCttatg i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75462068 797 - 133195287 AGTGAAACAAGCC----GACAACTCTGATGAGCACGATGAGAGGAGGAA-GCAGATGAAGGAAGTGACCTTCAGTGAAGGCAAGAGCGCTGGAATCCCCAGGTAAAGAAAGGTCCCCCCAAAACAAGCACCTGGACACCCTGTGCGGGCTGTGAGAGCC-ACAGGGAGGGGCAGTTGGTCAACAGGGCTTCTGGCcaatggctcccagtctggctgttcatcagaatcatccaagctgctctttaaaaatgctgGA-AAAAATAAAAATAAAAACTAAAAAT------GTCTCAGGACCCCTTCCTACCCCCAAGAATCAGCACCTCCAGCATTCCAGGCTTTTAAGACGCTGCTCAGAGTCTCTGATGAGTGGCTCAGTTGGGGAATACCACCAGGGTCTGCACACGCACCCTGGGCATCCTGCCCTCTGAGCTTCCTGAACCCTGCCACTGACCCTCAGCCAGAAAT--------------GGGCACCGTCGTCACTAGAGAACAGTGTAAGAGTAGTAATGTTGCCttttttttttttttt------gagacggagtctcgctctgtcacccaggcta--------------gatctcagctcactgcaacctccacctcccaggttc-------------gcctcaacctcccgagtagctgggattacaggcacacgccaccaggcctggataactttttgtaattttagtagagacggggtttcactatgttggtcagtctggtcttgaactccctcaagtgacttcaagtgatctgcttgcttcggcctcccaaagtgctgggattacaggcatgagccaccgcaccctgccAGTAATGTTGCTCttatg i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73325377 796 - 125196307 AGTGAAACAAGCC----GACAACTCTGATGAACACGATGAGAGGAGGAA-GCAGATGAAGGAAGTGCCCTTCAGCGAAGGCAAGAGCGCTGGAATCCCCAGGTAAAGAAAGGTCCCCCCAAAACAAGCACCTGGACACCCTGTGCAGGCTGCGAGAGCC-ACAGGGAGGGGCAGTTGGTCAACAGGGCTTCTGGCCAATGGCTCCCAGTCTGGCTGTTCATCAGAATCATCCAAGCTGCTCTTTaaaaatgctgga-------aaaaataaaaactaaaaat------gtctcAGGACCCCTTCCTACCCCCAAGAATCAGCACCTCCAGCATTCCAGGCTTTTAAGACGCTGCTCAGAGTCTCTGATGAGTGGCTCAGTTGGGGAATACCACCAGGGTCTGCACACGCACCCTGGGCATCCTGCCCTCTGAGCTTCCTGAACCCTGCCACTGACCCTCAGCCAGAAAT--------------GGGCACAGTCGTCACTAGAGAACAGTGTAAGAGTAGtaatgttgccttttttttttttttt-ttttggagacagagtctcgctctgtcacccaggcta--------------gatctcagctcactgcaacctccacctcccaggttc-------------gcctcaacctcccgagtagctgggattacaggcacacgccaccaggcctggataactttttgtaattttagtagagacggggtttcactatgttggtcagtctggtcttgaactcccttaagtgacttcaaatgatctgcttgcttcggcctcccaaagtgctgggattacaggcatgagccaccgcaccctgccagtAATGTTGCTCTTATG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72158252 781 - 125710982 AGTGAAACAAGCC----GACAACTCTGATGAGCAGGATGAGA--------------GAAGGAAGTGCCCTCCAGCAAAGGCAAGAGCGCTGGAATCCCCAGGTAAAGAAAGGTCCCCCCAAAACAAGCACCTGGACACCCTGTGCGGGCTGTGAGAGCC-ACAGGGAGGGGCAGTTGGTCAACAGGGCTTCTGGCcaatggctcccagtctggctgttcatcagaatcatccaagctgctctttaaaaatgctgGA-AAAAATAAAAATAAAAACTAAAAAT------GTCTCAGGACCCCTTCCTACCCCCAAGAATCAGCACCTTCAGCATTCCAGGCTTTTAAGACGCTGCTCAGAGTCTCTGATGAGTGGCTCAGTTGGGGAATACCACCAGGGTCTGCACACCCACCCTGGGCATCCTGCCCTCTGAGCTTCCTGAACCCTGCCACTGACCCTCAGCCAGAAAT--------------GGGCACCGTCGTCACTAGAGAACAGTGTAAGAGTAGTAATGTTGCC---ttttattttttt------gagacggagtctctctctgtcacccaggcta--------------gatctcagctcactgcaacctccacctcccaggttc-------------gcctcaaactcccgagtagctgggattacaggcgcaagccaccaggcctggataattttttgtaattttagtagagatggggtttcactatattggtcagtctggtcttgaactccctcatgtgacctcaagtgatctgcttgcttcggcctcccgaagtgctgggattacaggcatgagccaccgcaccctgccAGTAATGTTGCTCttatg i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75617492 830 - 121768101 AGTGAAACAAGCCAACGGACAACTCTGATGGGCAGGATGTGAGGAGGAAGGGGGATGAAGGAAGTACCCTTCAGGGAAGGCAGGAGCACTGGAACCCCCAGGTAAAGAAAGGTCCCCTC-AAGCAAGCATCTGGACACCCAGTGCAGGCTGTGAGAGCC-AGAGGGAGAGAGAGTCGATCAATGGAGCTTCTGGCcaacagctcccaacctggctgttcatcagaatcatccaaactgctctttaaaaatgctgGAAAAAAATAAAAATAAAAACTAAAAATGCCGAAGTCTCAGGAACCCTTCCTACCCTCAAGCATCAGCACCTCCAGCATTCCAGGCTTTTAAGACGCTGTTCAGCAACTCTGATGAGTGACTCAGTCAGGGAATGCCACCAGGATCTGTACATGCACCT-----------CTCTCTGAGCTTCCTGAACCCTGCCATTGACCCTCAGCCAGAAATGCCTGCCCCTCCCAGGGTACCATCATCACTACAGAACTGTGTAACAGTAGTAATGTTGCt-tttttttttttttt------gagacagagtcttgctctgtca-ccaggctggagtgcaatggcgcgatctcggctgactgcaacctccacctcccaggttcaagagattctccagcctcagccctctgaatagctgagattacaggtgtgtgccaccaggcccagctcattttttgtatttttagtagagacggggtttcaccatgttggtcagtctggtcttgaactcc------tgacctcaagtgatctgccgccttcagcctctcaaagtgctgagattacaggcatgagccactgtgcccCACCAGTAATGTTGCTCttagg i calJac3.chr12 C 0 C 0 e canFam3.chr4 27774166 62 + 88276631 I e mm10.chr14 24213728 68 + 124902244 I a score=1296686.000000 s hg38.chr10_KI270825v1_alt 125364 401 + 188315 ggctgaagtgtattcc-cccaaaatccatatgttaaagccctaaccccttctgcagttcctcaaaatatgactgtattggaagataaggtctttaaagatgtaataaagttaatatgaggccatgagggtgggccctaa---tccaaaatgactggcatccttataacaagagatcaggacacagacatgcacagaaggagaactgcatgaagaactgcacggagaacatggccatctgcaagctaagg-aaagaagcttcagaag-aaacctgcccatctgacgccctgaccttggacttccagcctccagaactgtgagataatccatgtctgttgtttaagcttcctggtctgtgatactctg-tatggcagccttagcaaactaatacaGTTGCAACCATTTAC s panTro4.chr10 76502797 401 + 133524379 ggctgaagtgtattcc-cccaaaatccatatgttaaagccctaaccccttctgcagttcctcaaaatatgactgtattggaagataaggtctttaaagatgtaataaagttaatatgaggccatgagggtgggccctaa---tccaaaatgactggcatccttataacaagagatcaggacacagacatgcacagaaggagaactgcatgaagaactgcacggagaatatggccatctgcaagctaagg-aaagaagcttcagaag-aaacctgcccatctgacgccttgaccttggacttccagcctccagaactgtgagataatccatgtctgttgtttaagcttcctggtctgtgatactctg-tatggcagccttagcaaactaatacaGTTGCAACCATTTAC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76172527 400 - 133410057 ggctgaaatgtattcc-cacaaaatccatatgttaaagccctaaccccttctgcagttcctcaaaatatgactgtattggaagataaggcctttaaagatgtaataaagttaaaatgaggccatgagggtgggccctaa---tcccaaatgactggcatccttataacaagagatcaggacacagacatgcacagaaggagaactgcatgaagaactgcacggagaacatggccatctgcaagctaagg-aaagaagcttcagaag-aaacctgcccatctgacgccttgaccttggacttccagcctctagaactgtgagataatccatgtctgttgtttaggcctcctggtctgtgatactctg-tatggcagccttagcaaact-atacaGTTGCAACCATTTAC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35107396 400 + 104879549 gactgaagtgtattcc-cctaaaatccgtatgttaaagccctaaccccttctgcagttccccaaaatatgactgtattggaagataaggtctttaaagatgtaacaaagttaaaatgaggccatgagggtgcgccctaa---tccaaaatgactggcatccttataacaagagatcaggacacagacatgcacagaaggagaactgcatgaagaactgcacggagaacatggccatctgcaagctaagg-aaagaagcttcagaag-aaacttgcccatctgacgccttgaccttggacttccagcctctagaactgtgagataatccatgtctgttgtttaagcctcccggtctatgatactctg-tatggcagccttagcaaact-aCACAGTTGCAACCATTTAC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73902544 399 - 130959383 ggctgaagtgtattcc-cccaaaatccatatgttgaagccctaaccccttctgcagttcctcaacatatgactgtattggaagataaagtctttaaagatgtaaagaagttaaaatgaggccatgagggtggg--ctaa---tccaaaatgattggcatccttataacaagagatcaggacacagacatgcacagaaggacaactgcatgaagaactgcatggagaacatggccatctgcaagctaagg-aaagaagcttcagaag-aaacctgcccatctgacaccttgaccttggacttccagcctctagaactgtgagacaatccatgtctgttgtttaagcctcctggtctgtgatactctg-tatggcagccttagcaaactaagataGTTGCAACCATTTAC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75462865 399 - 133195287 ggctgaagtgtattcc-cccaaaatccatatgttgaagccctaaccccttctgcagttcctcaacatatgactgtattggaagataaagtctttaaagatgtaaagaagttaaaatgaggccatgagggtggg--ctaa---tccaaaatgactggcatccttataacaagagatcaggacacagacatgcacagaaggacaactgcatgaagaactgcatggagaacatggccatctgcaagctaagg-aaagaagcttcagaag-aaacctgcccatctgacgccttgaccttggacttccagcctctagaactgtgagacaatccatgtctgttgtttaagcctcctggtctgtgatactctg-tatggcagccttagcaaactaagacaGTTGCAACCATTTAC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73326173 400 - 125196307 GGCTGAAGTGTATTCc-cccaaaatccatatgttgaagccctaaccccttcTGCAGTTCCTCAACATATGACTGTATTGGAAGATAAAGACTTTAAAGATGTAATGAAGTCAAAATGAGGCCATGAggggggg--CTAA---TCCAAAATGATTGGCATCCTTATAACAAGAGAtcaggacacagacatgcacagaaggagaactgcatgaagaactgcatggagaacatggccatctgcaagctaaggTTAAGAAGCTTCAGAAG-AAACCTGCCCATCTGacgccttgaccttggacttccagcctctagaactgtgagacaatccatgtctgttgtttaagcctcctGGTCTGTGATACTCTG-TATggcagccttagcaaactaagACAGCTGCAACCATTTAC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72159033 399 - 125710982 gactgaagtgtattcc-cccaaaatccacatgttgaagccctaaccccttctgcagttcctcaacatatgactgtattggaagataaagtctttaaagatgtaatgaagttaaaatgaggccatgagggtggg--ctaa---tccaaaatgattggcatccttataacaagagatcaggacacagacatgcaaagaaggagaactgcatgaagaactgcatgaagaacatggccatctgcaagctaagg-aaagaagcttcagaag-aaacctgcccatctgacgccttgaccttggacttccagcctctagaactgtgaggtaatccatgtctgttgtttaagcctcctggtctgtgatactctg-tatggcagccttagcaaactaagacaGTTGCAACCATTTAC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75618322 399 - 121768101 ggctgaagtgtattcc-cctaaaatctatatgttgaagccctaaccccttctgcagttcctccaaatatgactgtattggaagataaggtctttaaagatgtgatgaagttaagatgaggccatgagggtgggccctaa---tccaatatgactggcaggcttataacaagagatcagaacacagacatgcacagcaggaaaatcacctgaagaa--acatggagaacacggccatctgcaagctaaga-aaagaagcttcagaag-aaacctgcccatctgacaccctgaccttggacttccagcctctagaactgtgagctaatccatgtctattgtttaagcctcctagtctgtgatactctg-tatggaagccttagcagacgaatacaGTTGTGACCataaac i calJac3.chr12 C 0 C 0 s canFam3.chr4 27774228 340 + 88276631 ggctgaactgtgtcccttccaaaattcaga-gcttaagccctaactc-----gcactacctgagcatgtgactgtgttagagggta--------aaagaggtga-----ttaatgtgaggtccgtagggtgggccctaaaacttctaagtgg----------------aggaaatc--gacacaggtgtg------agcacacacccacgagga----cacagaggagacactcacctac-ggccatgg-agggtggcccaagaaatcaccctgccc-----acaccttgatctgagtcttctagcctccagggctgcgagacaataaacagctgtggtgtgagccgaccagtccggggtactttgttatggc-----------aCCAATACAGTTGCTACTGTG--- i canFam3.chr4 I 62 C 0 e mm10.chr14 24213728 68 + 124902244 I a score=211847.000000 s hg38.chr10_KI270825v1_alt 125765 64 + 188315 CCATGCTCTGTGCAGGCCCTTCCAATACAGACATCACCCac-------------atac---------------actatc---------------tcacttaaaactt s panTro4.chr10 76503198 64 + 133524379 CCATGCTCTGTGCAGGCCCTTCCAATACAGACATCACCCac-------------atac---------------actatc---------------tcacttaaaactt i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76172927 64 - 133410057 CCATGCtctgtgcagccccttccaacacagacatcacccac-------------atac---------------actatc---------------tcacttaaaactt i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35107796 64 + 104879549 CCATGCtctgtgcagccccttccaatacagacatcacccac-------------atac---------------actatc---------------tcacttaaaactt i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73902943 64 - 130959383 CCATGCtctgtgcagccccttccaatacagacatcacccac-------------atac---------------gctatc---------------tcacttaaaacgt i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75463264 64 - 133195287 CCATGCtctgtgcagccccttccaatacagacatcacccac-------------atac---------------gctatc---------------tcacttaaaacgt i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73326573 64 - 125196307 CCATGCTCTCTGCAGCCCCTTCCAAAACAGACATCACCCAC-------------ATAT---------------ACTATC---------------TCACTTAAAACGT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72159432 64 - 125710982 CCATGCtctgtgcagccccttccaatacagacatcacccac-------------atac---------------actatc---------------tcacttaaaactt i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75618721 64 - 121768101 ccatgctctgtgcagccccttccaacacagacatcacctgc-------------atac---------------attacc---------------tcactgaaaactt i calJac3.chr12 C 0 I 320 s mm10.chr14 24213796 79 + 124902244 CCAGGCCACGTGTAGCCCACCCTAGTATAAACGCCCATCAT-------------AAACCAGAAGGCAAGCAGAAGCATT---------------GCCCTTAAGCTTG i mm10.chr14 I 68 C 0 s canFam3.chr4 27774568 92 + 88276631 CCAGACTCTGGGCTACCTTTTCCAGTACAGACACCTAGCACAGCGCCAGCCATGAGAG---------------ACCATCAAATTACTGTAATCTttacttaaatctc i canFam3.chr4 C 0 C 0 a score=2900669.000000 s hg38.chr10_KI270825v1_alt 125829 783 + 188315 -cagccc-cc-ag--gacaaacgtattgctgttagccccattttacagacaagaaccccaaggctctccaagatcaaggaactaacccaagatcattcagctagaaagtCAA---TGACCAGATGCACCCACCTCCCAGCCCTTTG-CCTGTAACTGCtcctgagctgcct---------gagtcctcagtcctctctgccatccgtcctGGGCCCACTCAGCAGCTGCA----------------GTCCTACCCCACCTGGATGAA-----CACTGTCTGAGCCCA-CTGTGCCTTCTTTCCCAGCCTCA-GGCCCCCAGCAGACAC-----TTCAGGGGAACACTGACTTGCTATCAT-CTGTAGTTTTTGAAACTTTTT-----------CTTTCTTTTATTTTTTAAATAAGCAC---TGTTGCTTTGGTAGT---CAG-AAAAAAAAATTAATATTAAAGAGAAAAAAGCTAACACGGTTAAGAGTTTCTATTGAATCTGTAGCCTGTGTGGAAAGAAAG-AAGTGATCAAAAGG--AATATATTTGGAAAGGCTACTAAGAATAAAAACAA-------------ACAAAAAAAATACAAGCTGCCCTTGCCAATGTCCCATCAGCTGAGATGAGATAAGAGATTCATGGGGCAGAAGTAAG--GCTGCTGAGGCCAGAGATCCCAGCCAGGCCATCTCCAGAAAATATCTATTTTTAAAGTCACGTTCCA-TTTCATCACATTTCAGAAAAACAAAG-AAGAGACCTTGAGGGACAGACAAACAGGCTCCAGAGC----CACACGCCTTTGTGTGTGCTCACAGCAGCAGCAGCCGT-GCCTACAGCCAGCCGGCGATTTTCATCTG s panTro4.chr10 76503262 783 + 133524379 -cagccc-cc-gg--gacaaacgtattgctgttagccccattttacagacaagaaccccaaggctctccaagatcaaggaactaacccaagatcattcagctagaaagtCAA---CGACCAGATGCACCCACCTCCCAGCCCTTTG-CCTGTAACTGCTCCTGAGCTGCCT---------GAGTCCTCAGTCCTCTCTGCCATCCGTCCTGGGCCCACTCAGCAGCTGCA----------------GTCCTACCCCACCTGGATGAA-----CACTGTCTGAGCCCA-CTGTGCCTTCTTTCCCAGCCTCA-GGCCCCCAGCAGACAC-----TTCAGGGGAACACTGACTTGCTATCAT-CTGTAGTTTTTGAAACTTTTT-----------CTTTCTTTTATTTTTTAAATAAGCAC---TGTTGCTTTGGTAGT---CAG-AAAAAAAAATTAATATTAAAGAGAAAAAAGCTAACACAGTTAAGAGTTTCTATTGAATCTGTAGCCTGTGTGGAAAGAAAG-AAGTGATCAAAAGG--AATATATTTGGAAAGACTACTAAGAATAAAAACAA-------------ACAAAAAAAATACAAGCTGCCCTTGCCAATGTCCCATCAGCTGAGATGAGATAAGAGATTCATGGGGCAGAAGTAAG--GCTGCTGAGGCCAGAGATCCCAGCCAGGCCATCTCCAGAAAATATCTATTTTTAAAGTCACGTTCCA-TTTCATCACATTTCAGAAAAACAAAG-AAGAGACCTTGAGGGACAGACAAACAGGCTCCAGAGC----CACACGCCTTTGTGTGTGCTCACGGCAGCAGCAGCTGT-GCCTACAGCCAGCCGGCGATTTTCATCTG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76172991 782 - 133410057 -cagccc-ct-gg--gacaaacgtattgctgttagccccattttacagacaagaaccccaaggctctccaagatcaaggaactaacccaagatcattcagctacaaagtCAA---TGACCAGATGCACCCACCTCCCAGCCCTTTG-CCTGTAACTGCTCCTGAGCTGCCT---------GAGTCCTCAGTCCTCTCTGCCATCCGTCCTGGGCCCACTCAGCAGCTGCA----------------GTCCTACCCCACCTGGATGAA-----CACTGTCTGAGCCCA-CTGTGCCTTCTTTCCCAGCCTCA-GGCCCCCAGCAGACAC-----TTCAGGGGAACACTGACTTGCTATCAT-CTGTAGTTCTTGAAACTTTTT-----------CTTTCTTTTATTTTTTAAATAAGCAC---TGTTGCTTTGGTGGT---CAGaaaaaaaaaattaatattaaaGAGAAAAAAGCTAACACCGTTAAGAGATTCTATTCAATCTGTAGCCTGTGTGGAAAGAAAG-AAGTGATCAAACGG--AATATATTTGGAAAGACTACTAAGAATAAAAACAA---------------AAAAAAAATACAAGCTGCCCTTGCCAATGTCCCATCAGCTGAGATGAGATAAGAGACTCATGGGGCAGAAGTAAG--GCTGCTGAGGCCAGAGATCCCAGCCAGGCCATCTCCAGAAAATATCTATTTTTAAAGTCACGTTCCA-TTTCATCACATTTCAGAAAAACAAAG-AAGAGACCTTGAGGGACAGACAAACAGGCTCCAGAGC----CACACGCCTTTGTGTGTGCTCACGGCAGCAGCAGCCGT-GCCTACAGCCAGCCGGTGATTTTCATCTG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35107860 786 + 104879549 -cagccc-cc-gg--gacaagcgtattgctgttagccccattttacagacaagaacaccaaggctctccaagatcagggaactaacccaagatcattcagctagaaagtCAA---TGATCAGATGCACCCACCTCCCAGCCCTTTG-CCTATAACTGCtcctgagctgcct---------gagtcctcagtcctctctgccatccgtcctGGGCCCACTCAGCAGCTGCA----------------GTCCTACCCCACCAGGATGAA-----CACTGTCTGAGCCCA-CTGTGCCTTCTTTCCCAGCCTCA-GACCCCCAGCAGACAC-----TTCAGGGGAACACTGACTTGCTATCAT-CTGTAGTTTTTGAAACTTCTT-----------CTTTCTTTTATTTTTTAAATAAGCAC---TGTTGCTTTGGTAGT---CAG--AAAAAAAATTAATATTAAAGAGAAAAAAGCTAACATGGTTAAGAGATTCTATTGAATCTGTAGCCTGTGTGGAAAGAAAG-AAGTGATCAAAAGC--AATATATTTGGAAAGACTACTAAGAATAAAAACGA-------------AAAAAAAAAATACAAGCTGCCCTTGCCAATGTCCCATCAGCTGAGATGAGATAAGAGACTCATGGGGCAGAAGTAAG--GCTGCTGAGGCCAGAGATCCCAGCCAGGCCATCTCCAGAAAATATCTATTTTTAAAGTCACGTTCCA-TTTCATCACATTTCAGAAAAACAAAG-AAGAGACCTTGAGGGACAGACAAACAGGCTCCAGAGCCACACACACGCCTTTGTGTGTTCTCACGGCAGCAGCAGCCGT-GCCTACAGCCAGCCGGCGATTTTCATCTG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73903007 779 - 130959383 -cagcac-cc-tg--gacaaacgtattgctgttagccccattttacagacaagaaccctgaggctctccaagatcaaggaactaacctaagatcattcagctaggaagtAAA---TGACCAGATGCGCCCACCTCCCAGCCCTGTG-CCTGTAACTGCTCCTGAGCTGCCT---------GAGTCCTCAGTCCTCTCTGCCATCTGTCCTGGGTCCACTTAGCAGCTGCA----------------GGCCTCCCCCTCC-GGATGAA-----CACTGTCTGAGCCCA-CTGTGCCTTCTTTCCCAGCCTCA-AGCCCCCAGCAGACAC-----TTCAGGGGAACACTGGCTTGCTATCAT-CTGTAGTTTTTGAAACTTTTT-----------CTTTCTTTTATTTTTTAAATAAGCAC---TATTGCTTGGGTAGT---CAG-AAAATAAAATTAATATTAAGGAGAAAAAAGCTAACATGGTTAAGAGATTCTATTGAATCTGTAGCCTGTGTGGAAAGAAAG-AAGTGATCAAAAGG--AATATATTTGAAAAGACTACTAAGAATAAAAAGG----------------AAAAAAAATACAAGCTGCCCTTGCCAATGTCCCATCAGCTGAGATGAGAAAAGAGACTCATGGGGCAGAAGTAAG--GCTGCTGAGGCCAGAGATCCCAGCCAGGCCATCTCCAGAAAATATCTATTTTTAAAGTCATGTTCCA-TTTCATCACATTTCAGAAAAACAAAG-AGGAGACCTTGAGGGACAGACAAACAGGCTCCAGAGC----CACACGCCTTTGAGTGTGCTCACGGCAGCAGCAGCCAT-GCCTACAGCCAGCCGGTGATTTTCATCTG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75463328 779 - 133195287 -cagcac-cc-tg--gacaaacgtattgctgttagccccattttacagacgagaaccctgaggctctccaagatcaaggaactaacctaagatcattcagctaggaagtAAA---TGACCAGATGCGCCCACCTCCCAGCCCTGTG-CCTGTAACTGCTCCTGAGCTGCCT---------GAGTCCTCAGTCCTCTCTGCCATCTGTCCTGGGTCCACTTAGCAGCTGCA----------------GGCCTCCCCCTCC-GGATGAA-----CACTGTCTGAGCCCA-CTGTGCCTTCTTTCCCAGCCTCA-AGCCCCCAGCAGACAC-----TTCAGGGGAACACTGGCTTGCTATCAT-CTGTAGTTTTTGAAACTTTTT-----------CTTTCTTTTATTTTTTAAATAAGCAC---TATTGCTTGGGTAGT---CAG-AAAATAAAATTAATATTAAGGAGAAAAAAGCTAACATGGTTAAGAGATTCTATTGAATCTGTAGCCTGTGTGGAAAGAAAG-AAGTGATCAAAAGG--AATATATTTGGAAAGACTACTAAGAATAAAAAGG----------------AAAAAAAATACAAGCTGCCCTTGCCAATGTCCCATCAGCTGAGATGAGATAAGAGACTCATGGGGCAGAAGTAAG--GCTGCTGAGGCCAGAGATCCCAGCCAGGCCATCTCCAGAAAATATCTATTTTTAAAGTCACGTTCCA-TTTCATCACATTTCAGAAAAACAAAG-AGGAGACCTTGAGGGACAGACAAACAGGCTCCAGAGC----CACACGCCTTTGAGTGTGCTCACGGCAGCAGCAGCCAT-GCCTACAGCCAGCCAGTGATTTTCATCTG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73326637 781 - 125196307 -CAGCAC-CC-CG--GACAAACGTATTGctgttagccccattttacagacgagaacCCTGAGGCTCTCCAAGATCAAGGAACTAACCTAAGATCATTCAGCTAGAAAGTAAA---TGACCAGATGCACCCACCTCCCAGCCCTGTG-CCTGTAACTGCTCCTGAGCTGCCT---------GAGTCCTCAGTCCTCTCTGCCATCTGTCCTGGGTCCACTCAGCAGCTGCA----------------GGCCTACCCCACCTGGATGAA-----CACTGTCTGAGCCCA-CTGTGCCTTCTTTCCCAGCCTCA-AGCCCCCAGCAGACAC-----TTCAGGGGAACACTGGCTTGCTATCAT-CTGTAgtttttgaaacttttt-----------ctttcttttattttttaaataagcac---tATTGCTTGGGtagt---cag-aaaataaaattaatattaaggagaaaaaaactaaCATGGTTAAGAGATTCTATTGAATCTGTAGCCTGTGTGGAAATAAAG-AAGTGATCAAAAGG--AATACATTTGGAAAGACTactaagaataaaaagga---------------aaaaaaaatacaagctgCCCTTGCCAATGTCCCATCAGCTGAGATGAGATAAGAGACTCATGGGGCAGAAGTAAG--GCTGCTGAGGCCAGAGATCCCAGCCAGGCCATCTccagaaaatatctatttttaaagtcATGTTCCA-TTTCATcacatttcagaaaaacaaag-aggagACCTTGAGGGACAGACAAACAGGCTCCAGAGC----CACACGCCGTTGAGTGTGCTCATGGCAGCAGCAGCCAT-GCCTACAGCCAGCCGGTGATTTTcacctg i papAnu2.chr9 C 0 I 261 s chlSab2.chr9 72159496 780 - 125710982 -cagcac-cc-cg--gacaaacgtattgctgttagccccattttacagacaagaaccctgaggctctccaagatcaaagaactaacctaagatcattcagctagaaagtAAA---TGACCAGATGCACCCACCTGCCAGCCCTGTG-CCTGTAACTGCTCCTGAGCTGCCT---------GAGTCCTCAGTCCTCTCTGCCATCTGTCCTGGGTCCACTCAGCAGCTGCA----------------GGCCTACCCCACCCGGATGAA-----CACTGTCTGAGCCCA-CTGTGCCTTCTTTCCCAGCCTCA-AGCCCCCAGCAGACAC-----TTCAGGGGAACACTGGATTGCTATCAT-CTGTAGTTTTTGAAACTTTTT-----------CTTTCTTTTATTTTTTAAATAAGCAC---TGTTGCTTGGGTAGT---CAG-AAAATAAAATTAATATTAAGGAGAAAAAAGCTAACATGGTTAAGAGATTCTATTGAATCTGTAGCCTGTGTGGAAAGAAAG-AAGTGATCAAAAGG--AATATATTTGGAAAGACTACTAAGAATAAAAAGG----------------AAAAAAAATACAAGCTGCCCTTGCCAATGTCCCATCAGCTGAGATGAGATAAGAGACTCATGGGGCAGAAGTAAG--GCTGCTGAGGCCAGAGATCCCAGCCAGGCCATCTCCAGAAAATATCTATTTTTAAAGTCACGTTCCA-CTTCATCACATTTCAGAAAAACAAAG-AGGAGACCTTGAGGGACAGACAAACAGGCTCCAGAGC----CACACGCCGTTGAGTGTGCTCATGGCAGCAGCAGCCAT-GCCTACAGCCAGCCGGTGATTTTCATCTG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75619105 784 - 121768101 -aagcac-ccagg--gacaaatgtattgctattagccccattttacagacaagaactccaaggctctccaagatcaagaaactagcccacaatcattcagcgagaaagtgAA---TGACCAGATGCACCCACCTCCCAGCCCTGTG-CCTGTAACTGCTCCTGAGCTGCTT---------GAGTCCTCAGTACTCTCCACCAGCCGTCCTGGGCCCACTCAGCAGCCGCA----------------GTCCTACCCTGCCTGGATGAA-----CAATGTCTGAGCCCA-CTGTGCCTTTTTTCCCAGCCTCA-GCCCCCAAGCAGACCC-----TTCAGGGGAACACTGGCTTGCTACAAT-CTGTAGTTTTTGAGA-TTTTT-----------CTTTCTTTTATTTTTTAAATACGCAC---TATTGCTTTGGTAGT---CAG--AAAAAAAATTAATATTAAAGAGAAAAAAGCTAACACGGTTAAGAGATTCTATTGAATCTGCAGCCTGTGTGGTAAGAAAG-AAGTGATCAAAAGATCAACATATTTGGAAAGACTACTAAGAATAAAAAGGA------------AAAAAATAAAATACAAGCTGCCCTTGCCAATGTCCCATCAGCCGAGATGAGATAAGAGACTCGTGGGGCAGAAGTAAG--GCTGCTGAGGCCAGAGATCCCAGCCGGGCCATCTCCAGAAAATATCTATTTTTAAAGTCACGTTCCA-TTTCATCACATTTCAGAAAAACAAAG-AGGAGACCTTGAGGGACAGACAAACAGGCTCCAGAGC----GACA-GGCTGTGTGTGTGCTCACGGCAGCAACAGCCGT-GCCTACGGCAAGCCAGCGATTTTCATCTG i calJac3.chr12 I 320 C 0 s mm10.chr14 24213875 770 + 124902244 -AAGCAT-GC-TGGAGAGAGAGGTCTTGCC-CCAGGTCCATTCTATAG-TAAGAACCCTGAGGTTCTCAAAGGTTAACAAAATAACCCAGGATTCT-------AAAAGCCAAGAGCCACCAGATGCACCATCCTCCTAGCCCTAAG-TCTAGAAGAACCACCGAGCCGCCTCTATTTTGCAAGCCCCACACTAGCCTTGC---CTGTTCCTCACCCATTAGGCTG--GCA----------------GGCTGTTCCTGAG-GGATGCAGTGTGCACAGACTGAAGCCATCCACTCCACCTCTCCCTGAGTGT-AGCCCCAAGCACACAC-----ATATAGAAAGCTCTTTCCTGTGAACAG-TTATAT--------ACTCTGT-----------CTTTTTTCCTTCTTTTAATTAACAATATATATTGCTTTGGTAATAGAAAG-GGGGAAAAGTCAGT----AGGAAATGTAAACCAACATAATTAAAATATGCTTTTAGATATTCAGTGCCTGTGCAGAGACAGTGGGTGATTAAAAGG--GATGCATCTGGAAAGACTACTAGGAAGAAGAGAG----------------AAAAAAAATCCAAGTCGTCACTGCCAATATCACATCAGCCGAAATGAGATAAAGGA-------AGCAGAGGTATG--GTGGCTGAGGCCAGGAAGCCAGCCTAGGCCATCACCAGAAATAGTCTGTTTTTAAAAGCACGTTCCA-TTTCAACACATTTCAGAAAAACAAAG-AGGAGACCTTGAGGGGAAGACAAACAGGTCCTACAGT----GACAAG-CAGCGGGTGTGCTTGCGGCAAAGGCAGCCA---CCCAGAGCCAGCCAGTGATCTTCATCTG i mm10.chr14 C 0 C 0 s canFam3.chr4 27774660 808 + 88276631 aaagcactcc-ag--caaagaggtattgcaattagccccgagtgacagacaaggaccctgaagctcagaaaaattaaggaacaagccctcgatcattcagc----------------------tGCACCCACCTCCAAGCCCTGCACCCTTTAACTATGGCCGAGCTGCCT---------CTAAACCAAAACCCCTCTGCCC----TTCCACACCCACTCAGCAGTCACAGTATGATCCCCGGAACGGCCTCGCCCACCTACATGAC-----CACTGTCTGAGGCCA-CTGAGCCTTTCTCCCCAGCCTTTCTGCTCCCAGCAGATACTCAGGTTTAAGGGAACTCAGGCTTTCTACCTTGTTACAGTTCTGGGATCTTCCCTCCCCCCTCCACCCCCGCTTTTTTTTTTAATGAGCAT------TGCTTTGATAAT---CAG-AAAAAAAAATTATTCTTAAGGA-AAAAACATTAGTACAGTTAAGGAATTCTACAGAATCTTCAGGCTGTGTGCAAATAAAT-AAGTAATAAAAAGG--AATATATTTGGAAAGACTATTATGAATAAAAAGGGGGTTATAAAACAACAAAAGCAAAAACAAGCAGCCCTTGCCAGCATCCTATCAGCTGAGATAAGATAAAGGACTCACGGGGCAGAAGGGAGAAGACCCCGCAACCAAG--TCCCAGCCAGGTCACCTCTAGAAAATATCTATTTTTAAAAGCACGTTCCATTTTCATCACATTTCAGAAAAACAAAGAAAGAGACCTTGAGGGGCAGACAGGCAGGCTCCTAAAC----CACTCG-CAGCACGCGTGCTCCCAGCTCAGGCGATGGTCGCCCATGGCCAGCCAGTGATTTTCATCGG i canFam3.chr4 C 0 C 0 a score=2001136.000000 s hg38.chr10_KI270825v1_alt 126612 520 + 188315 AAAAACTCAGATCTCTCATGGCAGAG-AGAGTTCCACA-CCGAGCTGCCATCATCATGCAGCCCAACAAAGCAGCAA-TTTTCATATTTCCTAGGGCCTGCTGGGCTCCCAACTTCTTAGTTTAAATGGAAACTGTCAGACAGGATTTTGTGCAAACATGC--GTTTTCCTCGGGGGCAAACATTCTGAGCCTACAACTTGTTCTTTCATTT--TGAGAGC---TTTTTGTCCATGGTGACTACATCAAAGAT--GAGAGGTGGGCGGGGAGGGCTGTTGGGGAGCACCA-GAGAACAGAGCAAATGCAAAGTG----CAGGGAGAGCAGAATGAATTACTAGGAGGCAAAGTGCGGCAGGAACTTATGTGCCTGGCCTCCTCC-TGGGCAGCAGCCTCAGAGGAAAGACCTTGGCTGGCTCTGCTCCCCACCTCTCCTGCAGCCCCTGCGTGGACAGCCCAGTCTGTGTCAGCACCTCTTCCCT-CGGGTGACCT---ACAAGGTCCTGGAGAGGAAAATGGTAGCAAAGAATGTGCAAA-----------------------A s panTro4.chr10 76504045 520 + 133524379 AAAAACTCAGATCTCTCATGGCAGAG-AGAGTTCCACA-CCGAGCTGCCATCATCATGCAGCCCAACAAAGCAGCAA-TTTTCATATTTCCTAGGGCCTGCTGGGCTCCCAACTTCTTAGTTTAAATGGAAACTGTCAGACAGGATTTTGTGCAAACATGC--GTTTTCCTCGGGGGCAAACATTCTGAGCCTACAACTTGTTCTTTCATTT--TGAGAGC---TTTTTGTCCATGGTGACTACATCAAAGAT--GAGAGGTGGGCGGGGAGGGCTGTCGGGGAGCACCA-GAGAACAGAGCAAATGCAAAGTG----CAGGGAGAACAGAATGAATTACTAGGAGGCAAAGTGCGGCAGGAACTTATGTGCCTGGCCTCCTCC-TGGGCAGCAGCCTCAGAGGAAAGACCTTGGCTGGCTCTGCTCCCCACCTCTCCTGCAGCCCCTGCGTGGACAGCCCAGTCTGTGTCAGCACCTCTTCCCT-CGGGTGACCT---ACAAGGTCCTGGAGAGGAAAATGGTAGCAAAGAATGTGCAAA-----------------------A i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76173773 523 - 133410057 AAAAACTCAGATCTCTCATGGCAGAGAAGAGTTCCACA-CTGAGCTGCCATCATCATGCAGCCCAACAAAGCGGCAA-TTTTCATATTTCCTAGGGCCTGCTGGGCTCCCAACTTCTTAGTTTAGATGGAAACTGTCAGACAGGATTTTGTGCAAACATGC--GTTTTCCTCAGGGGCAAACATTCTGAGCCTACAACTTGTTCTTTCATTT--TGAGAGC---TTTTTGTCCATGGTGACTACATCAAAGATGAGAGAGGCGGGTGGGGAGGGCTGTCGGGGAGCACCA-GAGAACAGAGCAAATGCAAAGTG----CAGGGAGAGCAGAATGAATTACTAGGAGGCAAAGTGCGGTAGGAACTTATGTGCCTGGCCTCCTCC-TGGGCAGCAGCCTCAGAGGAAAGACCTTGGCTGGCTCTGCTCCCCACCTCTCCTGAAGCCCCTGCGTGGACAGCCCAGTCTGTGTCAGCACCTCTTCCCT-CGGGTGACCT---ACAAGGTCCTGGAGAGGAAAATGGTAGCAAAGAATGTGCAAA-----------------------A i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35108646 523 + 104879549 AAAAACTCAGATCTCTCATGGCAGAA-AGAGTTCCACA-CCAAGCTGCCATCATCATGCTGCCCAACAAAGCGGCAA-TTTTCATATTTCCTAGGGCCTGCTGGGCTCCCAACTTCTTAGTTTAAATGGAAACTGTCAGACAGGATTTTGTGCAAACATGCAAGTTTTCCTTGGGGGCAAACATTCTGAGCCTACAACTTGTTCTTTCATTT--TGAGAGC---TTTTTGTCCATGGTGACTACATCAAAGATGAGAGAGGCGGGCGGGGAGGGCTGT-GGGGAGCACCA-GAGAACAGAGCAAATGCAAACTG----CAGGGAGAGCAGAATGAATTACTAGGAGGCAAAGTGCGGCAGGAACCTATGTGCCTCGCCTCCTCC-TGGGCAGCAGCCTCAGAGGAAAGACCTTGGCTGGCTCTGCTCCCCACCTTTCCTGCAGCCCCTGCATGGACAGCCCAGTCTGTGTCAGCACCTCTTCCCT-CGGGTGACCT---ACAAGGTCCTGGAGAGGAAAATGGTAGCAAAGAATGTGCAAA-----------------------A i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73903786 523 - 130959383 AAAAACTCAGATCCCTCATGGCAGAC-AGAGTTCCACC-CCAAGCTGCCATCATCACGCAGCCCAACAAAGCGGCAA-TTTTCATATTTCCTAGGGCCTGCTGGGCTCCCAACTTCTTAGTTTAAATGGAAACTGTCAGACAGGATTTTGTGCAAACATGC--GTTTTCCTCGGGGGCAAACATTCTGAGCCTACAACTTGTTCTTTCATTT--TGAGAGC---TTTTTGTCCATGGTGACTACATCAAAGATGAGAGAGGCGGGCGGGGAGGGCTGTCAGGGAGCACCA-GAGAACAGAGCAAATGCAAAGTG----CAGGAAGAGCAGAATGAATTACTAGGAGGCAAAGTACAGCAGGAACCTATGTGCCTCGCCTCCTCCTTGGGCAGCAACCTCAGAAGAAAGACTTTGGCAGGCTCCACTCCGCACCTCTCCTGCAGCCCCCGCGTGGACAGCCCAGTCTGTGTCAGCACCTCTTCCCT-TGGGTGACCT---GCAAGGTCCTGGGGAGGAAAATGGTAGCAAAGAACATGCAAA-----------------------A i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75464107 523 - 133195287 AAAAACTCAGATCCCTCATGGCAGAC-AGAGTTCCACC-CCAAGCTGCCATCATCACGCAGCCCAACAAAGCGGCAA-TTTTCATATTTCCTAGGGCCTGCTGGGCTCCCAACTTCTTAGTTTAAATGGAAACTGTCAGACAGGATTTTGTGCAAACATGC--GTTTTCCTCGGGGGCAAACATTCTGAGCCTACAACTTGTTCTTTCATTT--TGAGAGC---TTTTTGTCCATGGTGACTACATCAAAGATGAGAGAGGCGGGCGGGGAGGGCTGTCAGGGAGCACCA-GAGAACAGAGCAAATGCAAAGTG----CAGGAAGAGCAGAATGAATTACTAGGAGGCAAAGTACAGCAGGAACCTATGTGCCTCGCCTCCTCCTTGGGCAGCAACCTCAGAAGAAAGACTTTGGCAGGCTCCACTCCGCACCTCTCCTGCAGCCCCCGCGTGGACAGCCCAGTCTGTGTCAGCACCTCTTCCCT-TGGGTGACCT---GCAAGGTCCTGGGGAGGAAAATGGTAGCAAAGAACATGCAAA-----------------------A i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73327679 523 - 125196307 aaaaactcagatccCTCATGGCAGAC-AGAGTTCCACC-CCAAGCTGCCATCATCACGCAGCCCAACAAAGCGGCAA-TTTTCGTATTTCCTAGGGCCTGCTGGGCTCCCAACTTCTTAGTTTAAATGGAAACTGTCAGACAGGATTTTGTGCAAACATGC--GTTTTCCTCAGGGGCAAACATTCTGAGCCTACAACTTGTTCTTTCATTT--TGAGAGC---TTTTTGTCCATGGTGACTACATCAAAGATGAGCGAGGCAGGCGGGGAGGGCTGTCAGGGAGCACCA-GAGAACGGAGCAAATGCAAAGTG----CAGGGAGAGCAGAATGAATTACTAGGAGGCAAAGTACGGCAGGAACCTATGTGCCTCGCCTCCTCCTTGGGCAGCAACCTCAGAAGAAAGACTTTGGCAGGCTCCACTCCGCACCTCTCCTGCAGCCCCCGCGTGGACAGCCCAGTCTGTGTCAGCACCTCTTCCCT-TGGGTGACCT---GCAAGGTCCTGGGGAGGAAAATGGTACCAAAGAATGTGCAAA-----------------------A i papAnu2.chr9 I 261 C 0 s chlSab2.chr9 72160276 526 - 125710982 AAAAACTCAGATCCCTCATGGCAGGC-AGAGTTCCACC-CCAAGCTGCCATCATCACGCAGCCCAACAAAGCGGCAATTTTTCATATTTCCTAGGGCCTGCTGGGCTCCCAACTTCTTAGTTTAAATGGAAACTGTCAGACAGGATTTTGTGCAAACATGC--ATTTTCCTCGGGGGCAAACATTCTGAGCCTACAACTTGTTCTTTCATTT--TGAGAGCTTTTTTTTGTCCATGGTGACTACATCAAAGATGAGAGAGGGGGGCGGGGAGGGCTGTCAGGGAGCACCA-GAGAACAGAGCAAATGCAAAGTG----CAGGGAGAGCAGAATGAATTACTAGGAGGCAAAGTACGGCAGGAACCTATGTGCCTCGCCTCCTCCTTGGGCAGCAACCTCAGAAGAAAGACCTTGGCAGGCTCCACTCCGCACCTCTCCTGCAGCCCCCGCGTGGACAGCCCAGTCTGTGTCAGCACCTCTTCCCT-TGGGTGA-CT---GCAAGGTCCTGGGGAGGAAAATGGTAGCAAAGAATGTGCAAA-----------------------A i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75619889 545 - 121768101 AAAAACTCAGATCTCTCATGGCAGAC-AGAGTTCCACC-CCAAGCCACCATCAGTATGCAGCCCAACAAAGCAGCAA-TTTTCATATTTCCTAGGGCCTGCTGGGCTCCCAACTTCTTAGTTTAAATGGAAACTGTCAGACAGGATTTTGTGCAAACATGC--ATTTTCCTCGGGGGCAAACATTCTGAGTCTACAACTTGTTCTTTCATTT--TAAGAGC---TTTTTGTCCATGGTGACTACATCAAAGATGAGAGAGACGGGCAGGGAGGGCTGTCGGGGAGCACCA-GAGAACAGAGCAAATGCAGAGTG----CAGGGAGAGCAGAATGAATTACTAGGAGGTAAAGTGCAGCAGGAACCTATGTGCCTCGCCTCCTCC-TGGGCAGCAACCTCAGAGGAATGACCTTGGCTGGCTCTGCTGCCCACTTCTCCTGTAGCCCCTGCGTGGACAGCCCAGTCCGTGCCAGCACCTCTTCCCT-CAGGTGACCT---GCAAGGTCTTGGAGAGGAAAATGGTGGCAAAGAATGCGCAAAATCCTCAATGATTTATACAGTGCA i calJac3.chr12 C 0 C 0 s mm10.chr14 24214645 482 + 124902244 ACAAATTCAGATCTCTCATGGCAGACGAGACTCCAACA-GCGAATCACCATCGGCA-GCGGCCCCACAAAGTGCCAA-TTTTCATATTTCCTAAGGCCTGTGGGGCTCCGGGATTCTTGGCTTAAATGGAAACTGTCAGATAGGATTTTGTACAAACACGC--AGTTTCCTTGGGGGCAAACACTCTGAAAATACAACTTGCTTTTTCATTTTCTGACAGA---TTTTCATATATGGTGGTTGCATCAAAGATGAGACAGACA-GTAGGAAGGACTTCCGGGATGCC-----AGCACAGAGCAGACAAGGAGTGCATACAGGAGGAGCCGAATACATTGCCTG--GGCTGGGGGTAGGGGGCACAAATA----------------TAGGGGCCACCCCCA-----------------TGCTCTTCTCTTC----CTCCCACAGCCTCCCC----ACCACCC---CTGTAACACCATATCCTCCCTGCTGACGACCTGCAGCAAGGTCTTACAGGAGGAGCTGGAACAAAAGAATGTGAAAA-----------------------A i mm10.chr14 C 0 I 354 s canFam3.chr4 27775468 481 + 88276631 AAAAATTCAGATCTCAAGTGACAGAC-GGGGCTCAGCCAGGGAGCCCCCATCAGCATGCAGCCCAGCGAAGCGCCAA-TGTTCATATTTCCTACAGCCTGCTGGGCCCCCAACGTCTTAGTTAAAATGGAAACTGTCAGACAGGATTTTGTGCAAATATGC--ACTTTCCTTGGGGGCAAACATTCTAAGTCTACAACTTGTTCTTTTATTT--TCCCAGC---TTTCTGTCCACGGCGACAACATCAAAGATGGGAGAGGCGGGTGGGGAGGGCAGTT-GGGAGCACCAGGAGGACGGAGCAAACGCAAAGTG----CAGGAAGAGCCGGCTGAGTTACTAGAAGATAAA---------------ATGTGCTCAGCCCCTCAC---------AGTCCTGGAGAAATGACCTCACGGGGCCCCTC---------CTTTTGCAGCTCCTGCGAGCACGGCCCAA-CTGTGTTAGCACATCTTGCCTCCAGATGACCT-------------GAGAAGGGAAATACTATGAAAGAATATGCAAA-----------------------A i canFam3.chr4 C 0 C 0 a score=273288.000000 s hg38.chr10_KI270825v1_alt 127132 86 + 188315 ----------------------------------AA------CCATGATGACAGAAGACAGCAGAATTCCCATATGAATAGGATTAGGT-AAGAAGGGGTTAAATG-TGTTAATATTCATCAGGCGGA s panTro4.chr10 76504565 86 + 133524379 ----------------------------------AA------CCATGATGACAGAGGACAGCAGAATTCCCATATGAATAGGATTAGGT-AAGAAGGGGTTAAATG-TGTTAATATTCATCAGGCGGA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76174296 86 - 133410057 ----------------------------------AA------CCATGATGACAGAGGACAGCAGAATTCCCATATGAATAGGATTAGGT-AAGAAGGGGTTAAATG-TGTTAATATTCATCAGGCGGA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35109169 86 + 104879549 ----------------------------------AA------CCATGATGACAGAGGACAGCAGAATTCCCATATGAATAGGATTAGGT-AAGAAGGGGTTAAATG-TGTTAATATTCATCAGGCGGA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73904309 86 - 130959383 ----------------------------------AA------CCATGACGACAGAGGACAGCAGAATTCCCATATGAATAGGATTAGGT-AAGAAGGGGTTAAATG-TATTAGTATTCATCAGTCAGA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75464630 86 - 133195287 ----------------------------------AA------CCATGACGACAGAGGACAGCAGAATTCCCATATGAATAGGATTAGGT-AAGAAGGGGTTAAATG-TATTAGTATTCATCAGTCAGA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73328202 86 - 125196307 ----------------------------------AA------CCATGACGACAGAGGACAGCAGAATTCCCATATGAATAGGATTAGGT-AAGAAGGGGTTAAATG-TATTAGTATTCATCAGTCAGA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72160802 86 - 125710982 ----------------------------------AA------CCATGACGACAGAGGACAGCAGAATTCCCATATGAATAGGATTAGGT-AAGAAGGGGTTAAATG-TATTAGTATTCATCAGTCAGA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75620434 93 - 121768101 ----------------------------------AAGAGCTCCCATGATGACAGAGGACAGCAGAATTCCCATATGAAGAGGATTAGGTAAAGAACGGGTCAAATG-TATTAATATTCATTAGGCAGA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27775949 120 + 88276631 AAACAAAAAAGTTTCAAGGGGTGGGGGCAAAAAAAC------CTACAATAACAG-GAAAAGCAGAAGTCCCATCTGAATGGAATCAGAG-GAGCAAGTTCAAACTACTACTAATGTCCATCAAGAAAA i canFam3.chr4 C 0 C 0 e mm10.chr14 24215127 354 + 124902244 I a score=171192.000000 s hg38.chr10_KI270825v1_alt 127218 45 + 188315 GCTTTGCGACATAGTTTTAGGCAATGGTACTGACTCTTCTGGAAT s panTro4.chr10 76504651 45 + 133524379 GCTTTGCGACATAGTTTTAGGCAATGGTACTGACTCTTCTGGAAT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76174382 45 - 133410057 GCTTTGCGACATAGTTTTAGGCAATGGTACTGACTCTTCTGGAAT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35109255 45 + 104879549 GCTTTGCGCCCTAGTTTTAGGCAATGGTACTGACTCTTCTGGAAT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73904395 45 - 130959383 GCTTTGCGACATAGTTTTAGGTAATGGTACTGACTCTTCTGGCAT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75464716 45 - 133195287 GCTTTGCGACATAGTTTTAGGTAATGGTACTGACTCTTCTGGCAT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73328288 45 - 125196307 GCTTTGCGACATAGTTTTAGGTAATGGTACTGACTCTTCTGGCAT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72160888 45 - 125710982 GCTTTGCGACATAGTTTTAGGTAATGGTACTGACTCTTCTGGCAT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75620527 45 - 121768101 CCTTTGCGACATAGTTTTAGATAATAGTACTGACTCTTCTGGAAT i calJac3.chr12 C 0 C 0 s mm10.chr14 24215481 43 + 124902244 GCTTATAGACAAGGTTT--GTCAATGACACCAGTTTTTCTGAAAC i mm10.chr14 I 354 C 0 s canFam3.chr4 27776069 45 + 88276631 ACTGTTGGATGCAGTTTTAGTTAATGATACTGATTCTTCTGGAAC i canFam3.chr4 C 0 I 230 a score=706229.000000 s hg38.chr10_KI270825v1_alt 127263 213 + 188315 CATTTTAAAGGGCC-ACTCGCTT---------------TTTCATTATAAGTCCATTCACTGGAGCCTCTTAAGATAGTCTCAAAAGACAGATAGGAATGCGCCC-------------------------------------------------------------AAATCCACC--TGCGCACCAACACCGTGTGCCAAGCAAATGGAATCCTCGGGAAAGGACACCCATTAAGGACCATCCCAAACCCCGTTAATATGTACATGTTCCTCTCAAGCTTTATG----------CATTAAACC s panTro4.chr10 76504696 213 + 133524379 CATTTTAAAGGGCC-ACTCGCTT---------------TTTCATTATAAGTCCATTCACTGGAGCCTCTTAAGATAGTCTCAAAAGACAGATAGGAATGCACCC-------------------------------------------------------------AAATCCACC--TGCGCACCAACACCGTGTGCCAAGCAAATGGAATCCTCGGGAAAGGACACCCATTAAGGACCATCCCAACCCCTGTTAATATGTACATGTTCCTCTCAAGCTTTATG----------CATTAAACC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76174427 212 - 133410057 CATTTTAAAGGGCC-ACTCGCTT---------------TTTCATTATAAGTCCATTCACTGGAGCCTCTTAAGATAGCCTCAAAAGACAGATAGGAATGCACCC-------------------------------------------------------------AAATCCACC--TGCGCACCAACACCGTGTGCCAAGCAAATGGAATCCTCGGGCAAGGACACCCA-TAAGGACCATCCCAAGCCCCGTTAATACGTACATATTCCTCTCAAGCTTTATG----------CATTAAACC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35109300 212 + 104879549 CATTTTAAAGGGCC-ACTCGCTT---------------TTTCATTATAAGTCCATTCACTGGAGCCTCTTAAGATAGTCTCAAAAGACAGATAGGAATGCGCCC-------------------------------------------------------------AAATCCACC--TGTGCACCAACACCGTGTGCCAAGCAAATGGAATCCTCGGGCAAGGACACCCA-TAAGGACCATCCCAACCCCCGTTAATACGTACATGTTCCTCTCAAGCTTTATG----------CATTAAACC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73904440 222 - 130959383 CATTTTAAAGGGCC-ACTCGCTT---------------TTTCATTCTAAGTCCATTCACTGGAGCCTCTGAAGATAGTCTCAAAAGACAGATAGGAATGCGCCC-------------------------------------------------------------AAATCCACC--TGTGCACCAACACCGTGTGCCAAGCAAATGGAATTCTCAGGCAAGGACACCCG-TAAGGACCATCCCAGCCCCTGTTAATAAGTACATGTTCCTCTCAAGCTTTATACGTTAAACCTCATTAAACC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75464761 222 - 133195287 CATTTTAAAGGGCC-ACTCGCTT---------------TTTCATTCTAAGTCCATTCAGTGGAGCCTCTGATGATAGTCTCAAAAGACAGATAGGAATGCGCCC-------------------------------------------------------------AAATCCACC--TGTGCACCAACACCGTGTGCCAAGCAAATGGAATTCTCAGGCAAGGACACCCG-TAAGGACCATCCCAGCCCCTGTTAATAAGTACATGTTCCTCTCAAGCTTTATACGTTAAACCTCATTAAACC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73328333 222 - 125196307 CATTTTAAAGGGCC-ACTCGCTT---------------TTTCATTCTAAGTCCATTCACTGGAGCCTCTGAAGATAGTCTCAAAAGACAGATAGGAACGCGCCC-------------------------------------------------------------AAATCCACC--TGTGCACTAACACCGTGTGCCAAGCAAATGGAATTCTCAGGCAAGGACACCCG-TAAGGACCATCCCAGCCCCCGTTAATAAGTACATGTTCCTCTCAAGCTTTATACGTTAAACCTCATTAAACC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72160933 222 - 125710982 TATTTTAAAGGGCC-ACTTGCTT---------------TTTCATTCTAAGTCCATTCACTGGAGCCTCTGAAGATAGTCTCAAAAGACAGATAGGAATGCGCCC-------------------------------------------------------------AAATCCACC--TGTGCACTAACACCGTGTGCCAAGCAAATGGAATTCTCAGGCAAGGACACCCG-TAAGGACCATCCCAGCCCCCGTTAATAAGTACATGTTCCTCTCAAGCTTTATACATTAAACCTCATTAAACC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75620572 212 - 121768101 CATTTTAAAGGGCC-ACTCGTTC---------------TTTCATTCTAAGTCCATTCCCCGGAGCCTCTTAAAATAGTCTCAAAAGACAGACAGGAACGCGTCC-------------------------------------------------------------AAATTCACC--AGCGCACCATCACCACATGCCAAGCAAATGGAGTTCTCAGGCAATGACATCCA-TAAGGACCATCCCAGTCCTTGTTAATGAGTATATGTTCCTCTCAAGCAACAAG----------AGCAAAACT i calJac3.chr12 C 0 I 29 s mm10.chr14 24215524 284 + 124902244 CATTTTAAAGAGCCAACTCCCTTTTCTCCTAAGACCCCTTTTCTCCTAAGACCCTTTCCTGGCTCCTCATAAAACTGTCTCAAAGAGCACATTAGAAAGAGCTAAAATAAGGGATATGTGGCAACTGTAACGTCTTGGATTCTCATTGGGAATTCAAATGATCAGAAATCTACT--TCCATGCCAGCACTACACTTGGAGAAAACAG-TTTCTACAGTGAGGACATCTC-TGAGATTCAGCCTGA--CTTGTTAATAAAGACACCTTC--CTCAAGTTTCATG----------TTTTATCCT i mm10.chr14 C 0 C 0 s canFam3.chr4 27776344 207 + 88276631 CCTTTTGAAGAGCC-AGCCACTT---------------TTTCATAGTAAGATCATTCACTGGAGCCTCGTCCGATAGCCTCAAAACACAGCGAGGCGTGTGCCC-------------------------------------------------------------AAATTCACCTTTCTGCATCGGCGCC---TGTGGGGCAAGTGGAGTTCT-----GAGGATGTCCA----------GCCCAGCGCCTGCTACTAAATACATCTTCCCCACAAGTTTCATACTTTCAACCCAGTTAGACC i canFam3.chr4 I 230 C 0 a score=78267.000000 s hg38.chr10_KI270825v1_alt 127476 28 + 188315 AAGTCAACTAATATTTTCCAAGCTCTTT s panTro4.chr10 76504909 28 + 133524379 AAGTCAACTAATATTTTCCAAGCTCTTT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76174639 28 - 133410057 AAGTCAACTAATATTTTCCAAGCTCTTT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35109512 28 + 104879549 AAGTCAACTAGTATTTTCCAAGCTCTTT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73904662 28 - 130959383 AAGTCAACTAATATTTTCCAAGCTCTTT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75464983 28 - 133195287 AAGTCAACTAATATTTTCCAAGCTCTTT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73328555 28 - 125196307 AAGTCAACTAATATTTTCCAAGCTCTTT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72161155 28 - 125710982 AAGTCAACTAATATTTTCCAAGCTCTTT i chlSab2.chr9 C 0 C 0 s mm10.chr14 24215808 17 + 124902244 -----AACTGAAG---TCCATCCTC--- i mm10.chr14 C 0 C 0 s canFam3.chr4 27776551 28 + 88276631 ACGTCACCTCATGTTTACCAAGTTCCCT i canFam3.chr4 C 0 C 0 e calJac3.chr12 75620784 29 - 121768101 I a score=180407.000000 s hg38.chr10_KI270825v1_alt 127504 58 + 188315 TAAGATGTGTGGTCTTTT---ATATGTGG---GTTGT-----GTGTGTGTTTGAGGGGTAGTGACGAAG s panTro4.chr10 76504937 58 + 133524379 TAAGATGTGTGGTCTTTT---ATATGTGG---GTTGT-----GTGTGTGTTTGAGGGGTAGTGACGAAG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76174667 58 - 133410057 TAAGATGTGTGGTCTTTC---ATATGTGG---GTTGT-----GTGTGTGTTTGAGGGGTAGTGACAAAG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35109540 58 + 104879549 TAAGATGTGTGGTCTTTT---ATATGTGG---GTTGT-----TTGTGTGTTTGAGGGGTAGTGACGAAG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73904690 58 - 130959383 TAAGATGTGTGGTCTTTC---ATATGTGG---GGTGT-----GTGTGTGTTTGAGGGGGAGTGACGAAG i rheMac3.chr9 C 0 I 821 s macFas5.chr9 75465011 58 - 133195287 TAAGATGTGTGGTCTTTC---ATATGTGG---GGTGT-----GTGTGTGTTTGAGGGGGAGTGACGAAG i macFas5.chr9 C 0 I 820 s papAnu2.chr9 73328583 58 - 125196307 TAAGATGTGTGGTCTTTt---atatgtgg---ggtgt-----gtgtgtgtttgaggggGAGTGACGAAG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72161183 58 - 125710982 GAAGATGCGTGGTCTTTT---ATATGTGG---GGTGT-----GTGTGTGTTTGACGGGGAGTGACAAAG i chlSab2.chr9 C 0 I 2 s calJac3.chr12 75620813 61 - 121768101 AAAGATGTGTGGTCTTTT---ACATCTGGGTAGGTGG-----GTACGTGTTGGAGGCGGAGTGACAAAG i calJac3.chr12 I 29 C 0 s mm10.chr14 24215825 52 + 124902244 -AGTGTGTGTGCTTTCTT---A---GTGG---GTAAT-----AGTACTGCTTCGGGGG--ATGGTGAAG i mm10.chr14 C 0 C 0 s canFam3.chr4 27776579 66 + 88276631 TGAGGTGTGTGGTCTTTTGAAATGTGTGG---TATGTTTGGGGTTTGCGTTTGGGTGGGGGAGTTTAGA i canFam3.chr4 C 0 C 0 a score=422302.000000 s hg38.chr10_KI270825v1_alt 127562 118 + 188315 ACACCCCCATCAAGATAACTGAAGAAGAACTGCCCAAACTGAAACATTCAAATCTCCAAACGTCTCCATTCCCCCTAGGTGTTTGCATTTC-AGTGGATAAGATGAACACC-TGGCTGTG s panTro4.chr10 76504995 118 + 133524379 ACACCCCCATCAAGATAACTGAAGAAGAACTGCCCAAACTGAAACATTCAAATCTCCAAACGTCTCCATTCCCCCTAGGTGTTTGCATTTC-AGTGGATAAGATGAACACC-TGGCTGTG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76174725 115 - 133410057 ACACCCCCATCAAGATAACT---GAAGAACTGCCCAAACTGAAACATTCAAATCTCCAAATGTCTCCATTCCCCCTAGGTGTTTGCATTTC-AGTGGATAAGATGAACACC-TGGCTGTG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35109598 118 + 104879549 ACACCCCCATCAAGATAACTGAAAAAGAACTGCCCAAACTGAAACATTCAAATCTCCAAACATCTCCCTTCCCCCTAGGTGTTTGCATGCC-AGTGGATAAGATGAACACC-TGGCTGTG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73905569 118 - 130959383 ACACCCCCATCAAGATAACTGAAGAAGAACTGCCCAAACTGAAACATTCAAATCTCCAAATATCTCCATTCCCCTTAGGTGTTTGCATTTC-AGTGGATAAGATGAACACC-TGGCCATG i rheMac3.chr9 I 821 C 0 s macFas5.chr9 75465889 118 - 133195287 ACACCCCCATCAAGATAACTGAAGAAGAACTGCCCAAACTGAAACATTCAAATCTCCAAATATCTCCATTCCCCTTAGGTGTTTGCATTTC-AGTGGATAAGATGAACACC-TGGCCATG i macFas5.chr9 I 820 C 0 s papAnu2.chr9 73328641 118 - 125196307 ACATCCCCACCAAGATAACTGAAGAAGAACTGCCCAAACTGAAACATTCAAATCTCCAAATATCTCCATTCCCCTTAGGTGTTTGCATTTC-AGTGGATAAGATGAACACC-TGGCCGTG i papAnu2.chr9 C 0 I 957 s chlSab2.chr9 72161243 118 - 125710982 ACCCCCCCATCAAGATAACTGAAGAAGAACTGCCCAAACTGAAACATTCAAATCTCCAAATATCTCCATTCCCCTTAGGTGTTTGCATTTC-AGTGGATAAGATGAACACG-TGGCCGTG i chlSab2.chr9 I 2 C 0 s calJac3.chr12 75620874 118 - 121768101 ACACCCCCATCAAGATAACTGAGGAAGAACTGCCCAAACTGAAACATTCAAATCT-CAAATGTCTCCATTACCCCTAGGTGTTTGCATTTC-AGTGGGTAAGATGAACACCTTGGCCATG i calJac3.chr12 C 0 C 0 s mm10.chr14 24215877 103 + 124902244 AGACCCTTG-CAAGAAAA--GAGGAAGTGTTGCCAAAATTGGCACA-GCAAGTTTCCAAAAGTCTCAGCTCCTTT-----------ATCTA-AGGGGACAGAGTAAGCACC-TGACCAGG i mm10.chr14 C 0 C 0 s canFam3.chr4 27776645 116 + 88276631 AAGATTCCTTCAAGATAATTGAGAAAGAATTGCCCAAATTGAAACATTCAACTCTCCTAGAGTCTCATTTCTCCTC---TGTTGACATCTCAAGGAGACATGGTAAAAACC-CTGCCATG i canFam3.chr4 C 0 C 0 a score=8190.000000 s hg38.chr10_KI270825v1_alt 127680 2 + 188315 AA s panTro4.chr10 76505113 2 + 133524379 AA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76174840 2 - 133410057 AA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35109716 2 + 104879549 AA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73905687 2 - 130959383 AA i rheMac3.chr9 C 0 C 0 s papAnu2.chr9 73329716 2 - 125196307 AA i papAnu2.chr9 I 957 C 0 s chlSab2.chr9 72161361 2 - 125710982 AA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75620992 2 - 121768101 AA i calJac3.chr12 C 0 C 0 s mm10.chr14 24215980 2 + 124902244 AA i mm10.chr14 C 0 C 0 s canFam3.chr4 27776761 2 + 88276631 AA i canFam3.chr4 C 0 C 0 e macFas5.chr9 75466007 0 - 133195287 C a score=21735.000000 s hg38.chr10_KI270825v1_alt 127682 13 + 188315 GCCCACAGGTAAC s panTro4.chr10 76505115 13 + 133524379 GCCCACAGGTAAC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76174842 13 - 133410057 GCCCACAGGTAAC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35109718 13 + 104879549 GCCCACAGGTAAC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73905689 13 - 130959383 GCCCACAGGTAAC i rheMac3.chr9 C 0 C 0 s papAnu2.chr9 73329718 13 - 125196307 GCCCACAGGTAAC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72161363 13 - 125710982 GCCCACAGGTAAC i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27776763 1 + 88276631 --------G---- i canFam3.chr4 C 0 C 0 e mm10.chr14 24215982 0 + 124902244 C e calJac3.chr12 75620994 0 - 121768101 C e macFas5.chr9 75466007 0 - 133195287 C a score=3386.000000 s hg38.chr10_KI270825v1_alt 127695 4 + 188315 CTCC s panTro4.chr10 76505128 4 + 133524379 CTCC i panTro4.chr10 C 0 C 0 s nomLeu3.chr18 35109731 4 + 104879549 CTCC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73905702 4 - 130959383 TTCC i rheMac3.chr9 C 0 C 0 s papAnu2.chr9 73329731 4 - 125196307 CTCC i papAnu2.chr9 C 0 C 0 e canFam3.chr4 27776764 0 + 88276631 C e mm10.chr14 24215982 0 + 124902244 C e ponAbe2.chr10 76174855 0 - 133410057 C e calJac3.chr12 75620994 0 - 121768101 C e chlSab2.chr9 72161376 0 - 125710982 C e macFas5.chr9 75466007 0 - 133195287 C a score=8623.000000 s hg38.chr10_KI270825v1_alt 127699 7 + 188315 CAGGCCT s panTro4.chr10 76505132 7 + 133524379 CAGGCCT i panTro4.chr10 C 0 C 0 s nomLeu3.chr18 35109735 7 + 104879549 CAGGCCT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73905706 7 - 130959383 CAGGCCT i rheMac3.chr9 C 0 T 965 s papAnu2.chr9 73329735 7 - 125196307 CAGGCCT i papAnu2.chr9 C 0 T 983 s calJac3.chr12 75620994 7 - 121768101 CAAGGCT i calJac3.chr12 C 0 C 0 s canFam3.chr4 27776764 6 + 88276631 -AAGGGT i canFam3.chr4 C 0 C 0 e mm10.chr14 24215982 0 + 124902244 C e ponAbe2.chr10 76174855 0 - 133410057 C e chlSab2.chr9 72161376 0 - 125710982 C e macFas5.chr9 75466007 0 - 133195287 C a score=12804.000000 s hg38.chr10_KI270825v1_alt 127706 18 + 188315 CACAAGCCCACAGGTAAC s panTro4.chr10 76505139 18 + 133524379 CACAAGCCCACAGGTAAC i panTro4.chr10 C 0 C 0 s nomLeu3.chr18 35109742 18 + 104879549 CACAAGCCCACAGGTAAC i nomLeu3.chr18 C 0 T 44 s calJac3.chr12 75621001 18 - 121768101 CACAAGCCCACAAGTAAC i calJac3.chr12 C 0 C 0 s canFam3.chr4 27776770 17 + 88276631 CACAA-CCTACAGGGGAC i canFam3.chr4 C 0 C 0 e mm10.chr14 24215982 0 + 124902244 C e ponAbe2.chr10 76174855 0 - 133410057 C e chlSab2.chr9 72161376 0 - 125710982 C e papAnu2.chr9 73329742 983 - 125196307 T e macFas5.chr9 75466007 0 - 133195287 C e rheMac3.chr9 73905713 965 - 130959383 T a score=6438.000000 s hg38.chr10_KI270825v1_alt 127724 11 + 188315 CTCCCAGGCCT s panTro4.chr10 76505157 11 + 133524379 CTCCCAGGCCT i panTro4.chr10 C 0 C 0 s calJac3.chr12 75621019 11 - 121768101 CTCCCAGGCCT i calJac3.chr12 C 0 C 0 s canFam3.chr4 27776787 11 + 88276631 CTCCCAGGCCT i canFam3.chr4 C 0 I 51 e mm10.chr14 24215982 0 + 124902244 C e ponAbe2.chr10 76174855 0 - 133410057 C e nomLeu3.chr18 35109760 44 + 104879549 T e chlSab2.chr9 72161376 0 - 125710982 C e papAnu2.chr9 73329742 983 - 125196307 T e macFas5.chr9 75466007 0 - 133195287 C e rheMac3.chr9 73905713 965 - 130959383 T a score=573.000000 s hg38.chr10_KI270825v1_alt 127735 2 + 188315 CA s panTro4.chr10 76505168 2 + 133524379 CA i panTro4.chr10 C 0 C 0 s calJac3.chr12 75621030 2 - 121768101 CA i calJac3.chr12 C 0 T 38 e canFam3.chr4 27776798 51 + 88276631 I e mm10.chr14 24215982 0 + 124902244 C e ponAbe2.chr10 76174855 0 - 133410057 C e nomLeu3.chr18 35109760 44 + 104879549 T e chlSab2.chr9 72161376 0 - 125710982 C e papAnu2.chr9 73329742 983 - 125196307 T e macFas5.chr9 75466007 0 - 133195287 C e rheMac3.chr9 73905713 965 - 130959383 T a score=100.000000 s hg38.chr10_KI270825v1_alt 127737 1 + 188315 C s panTro4.chr10 76505170 1 + 133524379 C i panTro4.chr10 C 0 C 0 e canFam3.chr4 27776798 51 + 88276631 I e mm10.chr14 24215982 0 + 124902244 C e ponAbe2.chr10 76174855 0 - 133410057 C e nomLeu3.chr18 35109760 44 + 104879549 T e calJac3.chr12 75621032 38 - 121768101 T e chlSab2.chr9 72161376 0 - 125710982 C e papAnu2.chr9 73329742 983 - 125196307 T e macFas5.chr9 75466007 0 - 133195287 C e rheMac3.chr9 73905713 965 - 130959383 T a score=4311.000000 s hg38.chr10_KI270825v1_alt 127738 15 + 188315 AAGCCCACAGGTAAC s panTro4.chr10 76505171 15 + 133524379 AAGCCCACAGGTAAC i panTro4.chr10 C 0 I 116 s nomLeu3.chr18 35109716 15 + 104879549 AAGCCCACAGGTAAC i nomLeu3.chr18 T 44 C 0 e canFam3.chr4 27776798 51 + 88276631 I e mm10.chr14 24215982 0 + 124902244 C e ponAbe2.chr10 76174855 0 - 133410057 C e calJac3.chr12 75621032 38 - 121768101 T e chlSab2.chr9 72161376 0 - 125710982 C e papAnu2.chr9 73329742 983 - 125196307 T e macFas5.chr9 75466007 0 - 133195287 C e rheMac3.chr9 73905713 965 - 130959383 T a score=20063.000000 s hg38.chr10_KI270825v1_alt 127753 70 + 188315 CTCCCAGGCCTCACAAGCCCACAGGTAACCTCCCAGGCCTCACAAGCCCACAGGTAACCTCCCAGGCCTC s panTro4.chr10 76505302 70 + 133524379 CTCCCAGGCCTCACAAGCCCACAGGTAACCTCCCAGGCCTCACAAGCCCACAGGTAACCTCCCAGGCCTC i panTro4.chr10 I 116 C 0 s nomLeu3.chr18 35109731 70 + 104879549 CTCCCAGGCCTCACAAGCCCACAGGTAACCTCCCAGGCCTCACAAGCCCACAAGTAACCTCCCAGGCCTC i nomLeu3.chr18 C 0 T 58 e canFam3.chr4 27776798 51 + 88276631 I e mm10.chr14 24215982 0 + 124902244 C e ponAbe2.chr10 76174855 0 - 133410057 C e calJac3.chr12 75621032 38 - 121768101 T e chlSab2.chr9 72161376 0 - 125710982 C e papAnu2.chr9 73329742 983 - 125196307 T e macFas5.chr9 75466007 0 - 133195287 C e rheMac3.chr9 73905713 965 - 130959383 T a score=6930.000000 s hg38.chr10_KI270825v1_alt 127823 24 + 188315 ACAAGCCCACAGGTAACCTCCCAG s panTro4.chr10 76505372 24 + 133524379 ACAAGCCCACAGGTAACCTCCCAG i panTro4.chr10 C 0 C 0 s nomLeu3.chr18 35109743 24 + 104879549 ACAAGCCCACAGGTAACCTCCCAG i nomLeu3.chr18 T 58 C 0 e canFam3.chr4 27776798 51 + 88276631 I e mm10.chr14 24215982 0 + 124902244 C e ponAbe2.chr10 76174855 0 - 133410057 C e calJac3.chr12 75621032 38 - 121768101 T e chlSab2.chr9 72161376 0 - 125710982 C e papAnu2.chr9 73329742 983 - 125196307 T e macFas5.chr9 75466007 0 - 133195287 C e rheMac3.chr9 73905713 965 - 130959383 T a score=9647.000000 s hg38.chr10_KI270825v1_alt 127847 34 + 188315 GCTTCACAAGCCCACAGGTAACCTCCCAGGCCTC s panTro4.chr10 76505396 34 + 133524379 GCTTCCCAAGCCCACAGGTAACCTCCCAGGCCTC i panTro4.chr10 C 0 C 0 s nomLeu3.chr18 35109767 34 + 104879549 GCCTCACAAGCCCACAAGTAACCTCCCAGGCCTC i nomLeu3.chr18 C 0 T 41 s mm10.chr14 24215982 27 + 124902244 GGTTTACAACCCCA---GGTGCCCCCCAGG---- i mm10.chr14 C 0 C 0 e canFam3.chr4 27776798 51 + 88276631 I e ponAbe2.chr10 76174855 0 - 133410057 C e calJac3.chr12 75621032 38 - 121768101 T e chlSab2.chr9 72161376 0 - 125710982 C e papAnu2.chr9 73329742 983 - 125196307 T e macFas5.chr9 75466007 0 - 133195287 C e rheMac3.chr9 73905713 965 - 130959383 T a score=1931.000000 s hg38.chr10_KI270825v1_alt 127881 17 + 188315 ACAAGCCCACAGGTAAA s panTro4.chr10 76505430 17 + 133524379 ACAAGCCCACAGGTAAA i panTro4.chr10 C 0 C 0 s mm10.chr14 24216009 10 + 124902244 -------CAAGGGCAAG i mm10.chr14 C 0 C 0 e canFam3.chr4 27776798 51 + 88276631 I e ponAbe2.chr10 76174855 0 - 133410057 C e nomLeu3.chr18 35109801 41 + 104879549 T e calJac3.chr12 75621032 38 - 121768101 T e chlSab2.chr9 72161376 0 - 125710982 C e papAnu2.chr9 73329742 983 - 125196307 T e macFas5.chr9 75466007 0 - 133195287 C e rheMac3.chr9 73905713 965 - 130959383 T a score=3490.000000 s hg38.chr10_KI270825v1_alt 127898 4 + 188315 CTCC s panTro4.chr10 76505447 4 + 133524379 CTCC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76174855 4 - 133410057 CTCC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35109760 4 + 104879549 CTCC i nomLeu3.chr18 T 41 C 0 s chlSab2.chr9 72161376 4 - 125710982 CTCC i chlSab2.chr9 C 0 C 0 s mm10.chr14 24216019 3 + 124902244 -TAT i mm10.chr14 C 0 C 0 e canFam3.chr4 27776798 51 + 88276631 I e calJac3.chr12 75621032 38 - 121768101 T e papAnu2.chr9 73329742 983 - 125196307 T e macFas5.chr9 75466007 0 - 133195287 C e rheMac3.chr9 73905713 965 - 130959383 T a score=11550.000000 s hg38.chr10_KI270825v1_alt 127902 10 + 188315 CAGGCCTCAC s panTro4.chr10 76505451 10 + 133524379 CAGGCCTCAC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76174859 10 - 133410057 CAGGCCTCAT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35109764 10 + 104879549 CAGGCCTCAC i nomLeu3.chr18 C 0 C 0 s chlSab2.chr9 72161380 10 - 125710982 CAGGCCCCAC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75620994 10 - 121768101 CAAGGCTCAC i calJac3.chr12 T 38 C 0 e canFam3.chr4 27776798 51 + 88276631 I e mm10.chr14 24216022 0 + 124902244 C e papAnu2.chr9 73329742 983 - 125196307 T e macFas5.chr9 75466007 0 - 133195287 C e rheMac3.chr9 73905713 965 - 130959383 T a score=31312.000000 s hg38.chr10_KI270825v1_alt 127912 13 + 188315 AAGCCCACAGGTA s panTro4.chr10 76505461 13 + 133524379 AAGCCCACAGGTA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76174869 13 - 133410057 AAGCCCATAGGTA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35109774 13 + 104879549 AAGCCCACAAGTA i nomLeu3.chr18 C 0 C 0 s macFas5.chr9 75466007 13 - 133195287 AAGCCCACAGGTA i macFas5.chr9 C 0 T 951 s papAnu2.chr9 73328759 13 - 125196307 AAGCCCACAGGTA i papAnu2.chr9 T 983 C 0 s chlSab2.chr9 72161390 13 - 125710982 AAGCCCACAGGTA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75621004 13 - 121768101 AAGCCCACAAGTA i calJac3.chr12 C 0 C 0 s mm10.chr14 24216022 4 + 124902244 ---------GGAA i mm10.chr14 C 0 C 0 e canFam3.chr4 27776798 51 + 88276631 I e rheMac3.chr9 73905713 965 - 130959383 T a score=79414.000000 s hg38.chr10_KI270825v1_alt 127925 25 + 188315 ACCTCCCAGGCCTCTGCCAAGCAGA--- s panTro4.chr10 76505474 25 + 133524379 ACCTCCCAGGCCTCTGCCAAGCAGA--- i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76174882 25 - 133410057 ACCTCCCAGGCCTCTGCCAAGCAGA--- i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35109787 25 + 104879549 ACCTCCCAGGCCTCTGCCAAGCAGA--- i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73904748 25 - 130959383 ACCTCCCAGGCCTGTGCCAAGCAGA--- i rheMac3.chr9 T 965 C 0 s macFas5.chr9 75465069 25 - 133195287 ACCTCCCAGGCCTGTGCCAAGCAGA--- i macFas5.chr9 T 951 C 0 s papAnu2.chr9 73328772 25 - 125196307 ACCTCCCAGGCCTGTGCCAAGCAGA--- i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72161403 25 - 125710982 ACCTCCCAGGCCTGTGCCAAGCAGA--- i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75621017 28 - 121768101 ACCTCCCAGGCCTCAGCTAAGCAGAAGT i calJac3.chr12 C 0 C 0 s mm10.chr14 24216026 22 + 124902244 ACCAGTGAGGTCT---CCAGACAGA--- i mm10.chr14 C 0 C 0 e canFam3.chr4 27776798 51 + 88276631 I a score=1811385.000000 s hg38.chr10_KI270825v1_alt 127950 509 + 188315 ACCAATGA--AGTCTGTTGACACAAGTCACTAGGGAAAAAAAAAAAAAAAAGTCTCTGCAACTCTGTGCTCC----CCATTATCAGAGAAAATGA-GGTCTGTTCTGGGCCTCCCAGCTCTGAGCTGGCTGCCCTGGGTGCAGCCTTCCCCAAAAACTCTGGGTATCCAGC--CCTCACCCGTGCTGACAGCGCACTC-TGTCCACCAGCTCATGACAAAGGCCACTTGTTTCCCATGAGTGTCCAGAACAGTGGCTGAACCAGTCAACCCAGTCGGGGACTGTGGTCCTGCTGGATGGGCGGTGACAAGAGCTCACTGTGACCTCAGCAGACAATTAGCAAGGCGGTGTCGAGTTACTGAGCTCCAGCAGGTCACCTGCTAGGCTGGGAGAATGGACAGAATGCAGGTTCCAGACCCAAGAAGGGGTTAGGCA-GG---GTCACAGGCTACTTCATCTGC--CTCCGTATCTTTATGCTAAGCACTGCACCCTCTGACATTGGAGGGCAAGAAAAGAAAAGGTG- s panTro4.chr10 76505499 509 + 133524379 ACCAATGA--AGTCTGTTGACACAAGTCACTAGGGAAGAAAAAAAAAAAAAGTCTCTGCAACTCTGTGCTTC----CCATTATCAGAGAAAATGA-GGTCTGTTCTGGGCCTCCCAGCTCTGAGCTGGCTGCCCTGGGTGCAGCTTTCCCCAGAAACTCTGGGTATCCAGC--CCTCACCCGTGCTGACAGCGCACTC-TGTCCACCAGCTCATGACAAAGGCCACTTGTTTCCCATGAGTGTCCAGAACAGTGGCTGAACCAGTCAACCCAGTCGGGGACTGTGGTCCTGCTGGATGGGCGGTGACAAGAGCTCACTGTGACCTCAGCAGACAATTAGCAAGGCGGTGTCGAGTTACTGAGCTCCAGCAGGTCACCTGCTAGGCTGGGAGAATGGACAGAATGCAGGTTCCAGACCCAAGAAGGGGTTAGGCA-GG---GTCACAGGCTACTTCATCTGC--CTCCGTATCTTTATGCTAAGCACTGCACCCTCTGACATTGGAGGGCAAGAAAAGAAAAGGTG- i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76174907 486 - 133410057 ACCAATGG--AGTCTGTTGCCACAAGTCACTAG----AAAAAAAAAAAAAAGTCTCTGCAACTCTGTGCTCC----CCATTATCAGAGAAAATGA-GGTCTGTTCTGGGCCTCCCAGCTCTGAGCTGACTGCCCTGGGTGCAGCCTTCCCCAGAAACTCTGGGTATCCAGC--CCTCACCCGTACTGACGGCGCACTC-TGTCCACCAGCTCATGACAAAGGCCACTTGTTTCCCATGAGTGTCCAGAACAGTGGCTGAACCAGTTAGCCCAGTCGGGGACTGTGGTCCTGCTGCATGGGTGGTGACAAGAGCTCACTGTGACCTCAGCAGACAATTAGCAAAGCGGTGTCGAGTTACTGAGCTCCAGCAGGTCACCTGCTAGGCTGGGAGAATGGACAGAATGCAGGTTCTAGACCCAAGAAGGA-----------------------TACTTTGTCTGC--CTCTGTATCTTTGTGCTAAGCACTGCACCCTCTGACATTGGAGGGCAAGAAAAGAAAAGGTG- i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35109812 503 + 104879549 ACCAATGG--AGTCTGTTGACACAAGTCACTAG------AAAAAAAAAAAAGTCTCTGCAACTCTGTGCTCC----CCATTATCAGAGAAAATGA-GGTCTGTTCTGGGCCTCCCAGCTCTGAGCTGGCTGCCCTGGGTGCAGCCTTCCCCAGAAACTCTGGGTTTCCAGC--CATCACGCGTGCTGACAGCGCACTC-TGTCCACCAGCTCATGACAAAGGCCACTTGTTTCCCATGAGTGTCCAGAACAGTGGCTAAACCAGTCAGCCCAGTCGGGGACTGTGGTCCTGCTGGATGGGCGGTGACAAGAGCTCACTGTGATCTCAGCAGACAATTAGTAAGGCGGTGTTGAGTTACTGAGCTCCAGCAGGTCACCTGCTAGGCTGGGAGAATGGACAGAATGCAGGTTCTAGACCCAAGAAGAGGTCAGGCA-GG---GTCACAGGCTACTTCATCTGC--CTCTGTATCTTTATGCTAAGCACTGCACCCTCTGACATTGGAGGGCAAGAAAAGAAAAGGTG- i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73904773 496 - 130959383 ACCAGTGG--AGTCTGTTGACACAAGTCACT---------AAAAAAAAAAAGTCTCTGCAACTCTGTGCTCC----CCATTATCAGAGAAAATGA-GGTCTGTTCTGGGCCTCCCAGCTCTGAGCTGGCTGGCCTGGGTGCTGCCTACCCCAGAAACTCTGGGTATCCAGC--CCTCACCCATGCTGACAGCGTACTC-TGTCCACCAGCTCACCACAAAGGCCACTTGTTTCCCATGAGTGTCCAGAACAGTGGCTGAACCAGTCAGCCCAGTCGGGGACTGTGGTCCTGCTGGATGGGCGGTGACAAGAGCTCACTGTGAGCTCAGCAGACAATTACCAAGGCGGTGTCGAGTTACTGAGTTCCAGCAGGTCACCTGCTAGGCTGGGAGAATGGACAGAATGCGGGTTCTAGACCCAAAAAGGGGTTAAGCAGGG---GTCACAGCCTACTTCATCTGC--CTCTGTATCTTTATGCTAAGCACTGCACCCTCTGACAATGGAGGAC-----AAGAAAAGGAG- i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75465094 495 - 133195287 ACCAGTGG--AGTCTGTTGACACAAGTCACT----------AAAAAAAAAAGTCTCTGCAACTCTGTGCTCC----CCATTATCAGAGAAAATGA-GGTCTGTTCTGGGCCTCCCAGCTCTGAGCTGGCTGGCCTGGGTGCAGCCTACCCCAGAAACTCTGGGTATCCAGC--CCTCACCCATGCTGACAGCGTACTC-TGTCCACCAGCTCACCACAAAGGCCACTTGTTTCCCATGAGTGTCCAGAACAGTGGCTGAACCAGTCAGCCCAGTCGGGGACTGTGGTCCTGCTGGATGGGCGGTGACAAGAGCTCACTGTGAGCTCAGCAGACAATTACCAAGGCGGTGTCGAGTTACTGAGTTCCAGCAGGTCACCTGCTAGGCTGGGAGAATGGACAGAATGCGGGTTCTAGACCCAAAAAGGGGTTAAGCAGGG---GTCACAGGCTACTTCATCTGC--CTCTGTATCTTTATGCTAAGCACTGCACCCTCTGACAATGGAGGAC-----AAGAAAAGGAG- i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73328797 500 - 125196307 ACCAGTGG--AGTCTGTTGCCACAagtcact----------aaaaaaaaaagtctctgcaACTCTGTGCTCC----CCATTATCAGAGAAAATGA-GGTCTGTTCTGGGCCTCCCAGCTCTGAGCTGGCTGGCCTGGGTGCAGCCTACCCCAGAAACTCTGGGTATCCAGC--CCTCACCCATGCTGACAGCGCACTC-CGTCCACCAGCTCACCACAAAGGCCATTTGTTTCCCATGAGTGTCCAGAACAGTGGCTGAACCAGTCAGCCCAGTCGGGGACTGTGGTCCTGCTGGATGGGCGGTGACAagagctcactgtgacctcagcAGACAATTACCAAGGCGGTGTCGAGTTACTGAGTTCCAGCAGGTCACCTGCTAGGCTGGGAGAATGGACAGAATGCGGGTTCTAGACCCAAGAAGGGGTTAAGCAGGG---GTCACAGGCTACTTCATCTGC--CTCTGTATCTTTATGCTAAGCACTGCACCCTCTGACAATGgaggacaagaaaagaaaaggag- i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72161428 500 - 125710982 ACCAGTGG--AGTCTGTTGACACAAGTCACT----------AAAAAAAAAAGTCTCTGCAACTCTGTGCTCC----CCATTATCATAGAAAATGA-GGTCTGTTCTGGGCCTCCCAGCTCTGAGCTGGCTGGCCTGGGTGCAGCCTACCCCAGAAACTCTGGGTATCCAGC--CCTCACCCATGCTGACAGCGCACTC-TGTCCACCAGCTCACCACAAAGGCCACTTGTTTCCCATGAGTGTCCAGAACAGTGGCTGAACCAGTCAGCCCAGTCGGGGACTGTGGTCCTGCTGGATGGGCGGTGACAAGAGCTCACTGTGACCTCAGCAGACAATTACCAAGGCGGTGTCGAGTTACTGAGTTCCAGCAGGTCACCTGCTAGGCTGGGAGAATGGACAGAATGCGGGTTCTAGACCCAAGAAGGGGTTAAGCAGGG---GTCACAGGCTACTTCATCTGC--CTCTGTATCTTCATGCTAAGCACTGCGCCCTCTGACAATGGAGGACAAGAAAAGAAAAGGAG- i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75621045 479 - 121768101 ACCAATGG--AGTCTCTTGACACAAGTCACT----------AGAAGAAAAAGTCTCTGCAACTCTGTGCTCC----CCATTATCAGAGAAAATGA-TGTCTATTGTGCGCCTCTCAGCTCTGAGCTGGCTGCCCTGGGTGCAGCCTACCCCGGAAACTCTAGGTGTCCAGC--CCTCAGCCATGCTGACTGCGCACTC-TGTCCACCAACTCACCACAAAGGCCACTTGTTCCCCATGAGTGCCCAGAACAGTGGCTGAACCAGTTGGCCCAGTCGGGGACTGTGGTCCTGCTGGATGGGTGGTGACCAG----CGCTGTGACCTCAGCAGACAATTAGCAAGGCGGTGTTGAGTTACTGAGCTCCAGCAGGTCATCTGCTAGGCTGGGAGACTGGACAGAATGAGGCTTCTAGACCCAAGAA------------GG---GTCACAGGCTACTTCATCTGC--CTCTGTATCTCTACACCAAGCACTGCACCCTCTGAATCTGGAGGAC-----AAGAAAAGATG- i calJac3.chr12 C 0 C 0 s mm10.chr14 24216048 457 + 124902244 AACAGAAAACAGTCT-----------TCAGTGGCAACAGAAAGGACTGACAATCTCTGAAACACTACACTGC---------ATCACGGAGAAAAACAGTCTGTTCTGGG--TACCTGTTCCCAGCCGGTTGCCCTAAGTGCAG------------ACACATGGT----------------CAAGCTGG-AACACCCTC-CGCCTACC--------ACAAAGGCCATTTGTTTCTCATGAGCGCCTAGAGCATTAGTGGAACCAGTTGGCCCAGTCAGGAACTGTGACCCTGGTGGATGGGTGGTAACAAGGGCACACTGTGACCACACCAGATAATTAGCAAAGTAGCATTAAGTTACACAG-TCTAGCAATTCACCTGCCAGGC-AGGAGGATAGGCAGTATTCTGCTTCCAGATACCAGAAGGGGTCAGGTGGGGTTAATTACAAGCTATCACA----C--CTCTGCTTCCATACACTACACATGGTGCCTTGAGACACTAGAACACAGGAGAAGAAACTGTG- i mm10.chr14 C 0 I 276 s canFam3.chr4 27776849 502 + 88276631 ACCAGAGA--ACACTGTCTTCGACAGCAACC---GGAAGAGGAAAGGAGTGGTCCCTGCAACTCTGTGTCCCACCCCCATCATCA-AGGAAATGA-GGTCCACTGTGGGCTTCCCAGCTCAGACTCGGCTGCCTTGGGCCCCACCCAGCCCCGCAGGCCTGCGTGTGCAGCCACCTCACCCATGCTGACGAC-CACTCTTGTCCACCAGCTCACCACAAAGGCCACTTGTTTCCCATGAGTGCCCAGAACAGTGGCTCAACCAGTTGGCCCAGTCGGGGACCACGGTCCTGGTAGATGGGTGGTGACAAGGGCTCACTGTGGCCTCAAGAGACAATTAGCAGGACAGTGTCAAGTTACCAAG-----------CACCTGCCAGGCTGGGAGACTG--TAGGATTCAGTGTCCAAACCCAGGAAGGG-TCAGGCAGGGTCAGCTGCAGGCTATTTCACCTCCATCTCTGTCCCTCTACAATAAGCATTAGGTCCTCTGACACTGG-GAGCAAAAGAAGAAA-GGTGC i canFam3.chr4 I 51 C 0 a score=1000349.000000 s hg38.chr10_KI270825v1_alt 128459 298 + 188315 TTACAAGGAGGAGGCTAGAACCTATCCCAGGAGTAATCTGAGAAT-TGAGCCAGTGGTTGACAACCATcctaggaagtatttggaaatgtgtggagacatggtacggtggacacaatgatagggaggggcactg-----------taggtgggagccagagatggtgagcatcccaaaagtgca-gaagatcccAAAGCCAAGAGCATCCACTGAGATATACTGAAGTCAGTTCCATCTACCCCAGCTGCTCTGACCATACCTGAACCACTGTACTCAGCACAAAGCCACAACAAATGTGGAAGGCAGGGA s panTro4.chr10 76506008 298 + 133524379 TTACAAGGAGGAGGCTAGAACCTATCCCAGGAGTAATCTGAGAAT-TGAGCCAGTGGTTGACAACCATcctaggaagtatttggaaatgtgtggagacatggtacggtggacacaatgatagggaggggcacta-----------taggtgggagccagagatagtgagcatccCAAAAGTGCA-GAAGATCCCAAAGCCAAGAGCATCCATTGAGATATACTGAAGTCAGTTCCATCTACCCTAGCTGCTCTGACCATACCTGAACCACTGTACTCAGCACAAAGCCACAACAAATGTGGAAGGCAGGGA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76175393 297 - 133410057 TTACGAGGAGGAGGCTAGAACCTGTCCCAGGAGT-ACCTGAGAAT-TGAGCCAGTGGTTGACAACCATcctaggaagtatttggaaatgtgtggagacatggtgcggtggaaacaatgatagggagaggcacta-----------cgggtgggagccagagatggtgagcatcccgaaagtgca-gaagatcccAAAGCCAAGAGCATCCACTGAGATATACTGAAGTCAGTTCCATCTACCCCAGCTGCTCTGACCATACCTGAACCACTATACTCAGCACAAAGCCACAACAAATGTGGAAGGCAGGGA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35110315 298 + 104879549 TTACAAGGAGGAGGCTAGAACCTGTCCCAGGAGTAACCTGAGAAT-TGAACCAGTGGTTGACAACCATcctaggaagtatttggaaatgtgtggaggcatggtgcggtggacacaatgacagggaggggtgcta-----------tgggtgggagccagagatggtgagcatcccaaaagtgca-gaagatcccAAAGCCAAGAGCATCCACTGAGATATACTGAAGTCAGTTCCATCTACCCCAGCTGCTCTGACCATACCTGAACCACTGTACTCAGCACAAAGCCACAACAAATGTGGAATGCAGGGA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73905269 298 - 130959383 TTACAAGGAGGAGGCTAGAACCTGTCCCAGGAGTAACCTGAGAAT-TCAGCCAGTGGTTGACAACCATCCTAGGGAGTTTTTGGAAATGTGTGGAGACACGGTACAGTGGACACAATGATAGACAGGGGCACTA-----------TGGGTGGGAGCCAGAGATGGTGAGCATCCCCGAAGTGCA-GAAGATCCCAAAGCCAAGAGCATCCACTGAGATATACTGAAGTCAGTTCCATCTATCCCAGCTGCTCTGACCATACCTGAACCACTGTACTCAGCACAAAGCCACTACAAATGTGGAAGGCAGGGA i rheMac3.chr9 C 0 I 244 s macFas5.chr9 75465589 298 - 133195287 TTACAAGGAGGAGGCTAGAACCTGTCCCAGGAGTAACCTGAGAAT-TCAGCCAGTGGTTGACAACCATcctagggagtttttggaaatgtgtggagacacggtacagtggacacaatgatagacaggggcacta-----------tgggtgggagccagagatggtgagcatccccaaagtgca-gaagatcccAAAGCCAAGAGCATCCACTGAGATATACTGAAGTCAGTTCCATCTATCCCAGCTGCTCTGACCATACCTGAACCACTGTACTCAGCACAAAGCCACTACAAATGTGGAAGGCAGGGA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73329297 298 - 125196307 ttaCAAGGAGGAGGCTAGAACCTGTCCCAGGAGTAACCTGAGAAT-TCAGCCAATGGTTGACAACCATCCTAGGGAATTTTTGGAAATGTGTGGAGACACGGTGCGGTGGACACAATGACAGGCAGGGGCACTA-----------TGGGTGGGAGCCAGAGATGGTGAGCATCCCCAAAGTGCA-GAAGATCCCAAAGCCAAGAGCATCCACTGAGATATACTGAAGTCAGTTCCATCTATCCCAGCTGCTCTGACCATACCTGAACCACTGTACTCAGCACAAAGCCACTACAAATGTGGAAGGCAGGGA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72161928 298 - 125710982 TTACAAGGAAGAGGCTAGAATCTGTCCCAGGAGTAACCTGAGAAT-TCAGCCAGTGGTTGACAACCATcctagggagtttttggaaatgtgtggagacatggtacggtggacacaatgataggcaggggcacta-----------tgggtgggagccagggatggtgagcatccccaaagtgca-gaaGATCCCAAAGCCAAGAGCATCCACTGAGATATACTGAAGTCAGTTCCATCTATCCCAGCTGCTCTGACCATACCTGAACCACTGTACTCAACACAAAGCCACAACAAATGTGTAAGGCAGGGA i chlSab2.chr9 C 0 I 245 s calJac3.chr12 75621524 276 - 121768101 TTACAAGAAGGAGGCTAGAACCTGTCCCAGGAGTAACCTGAGCAT-TGAGCCAGTGGTTGACAACCATCCTAGGGAGTCTTCGGAAATGTGTGGAGACATGGTGCAGGGGACACAATGACAGGGAGGAGCACTA-----------TA----------------------CATCCCAAAAGTACA-GAAGATCCCAAAGCCAAGAGCATCCACTGAGACATACTGAAGTCAGTTCCATCTATCCCAGCTGTTCTGATCATAACTGAACTACTGTACTCAGCATAAAGCCACAACAAATGTGGAAGGCAGGAA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27777351 299 + 88276631 TCACAAGGAGGAG--------TTGTCACATGAACAATCTTGGGGTGCAAGGTAGAAGAGTAGAGTCTTCCAAGAGGATGCTCGGAAATGTGTAGGGACACAGTCCAGTAGACAT-ATGATGGAGAGGGGCACCACCAGCCCCCAGCAGGTGGAGACCAAAGATAACGAGCATCTGAAAAGTGCAGGAAGATCTGAAAGCCAACGGCGCCTGCTGAGACACGC-AAAGCCAATCCCATCTCTCCCAGCTGT--TAGCCACACCTGAACCACCACACTCAGCATAAAACCAAAGCAAACGGAGGACAGAGGAA i canFam3.chr4 C 0 C 0 e mm10.chr14 24216505 276 + 124902244 I a score=6441.000000 s hg38.chr10_KI270825v1_alt 128757 3 + 188315 AGA s panTro4.chr10 76506306 3 + 133524379 AGA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76175690 3 - 133410057 AGA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35110613 3 + 104879549 AGA i nomLeu3.chr18 C 0 C 0 s macFas5.chr9 75465887 3 - 133195287 GGA i macFas5.chr9 C 0 I 237 s papAnu2.chr9 73329595 3 - 125196307 GGA i papAnu2.chr9 C 0 I 238 s calJac3.chr12 75621800 3 - 121768101 AGA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27777650 3 + 88276631 AGA i canFam3.chr4 C 0 C 0 e mm10.chr14 24216505 276 + 124902244 I e chlSab2.chr9 72162226 245 - 125710982 I e rheMac3.chr9 73905567 244 - 130959383 I a score=4913.000000 s hg38.chr10_KI270825v1_alt 128760 4 + 188315 ACCA s panTro4.chr10 76506309 4 + 133524379 ACGA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76175693 4 - 133410057 ACCA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35110616 4 + 104879549 ACCA i nomLeu3.chr18 C 0 C 0 s macFas5.chr9 75466127 4 - 133195287 ACCC i macFas5.chr9 I 237 C 0 s papAnu2.chr9 73329836 4 - 125196307 ACCC i papAnu2.chr9 I 238 C 0 s calJac3.chr12 75621803 4 - 121768101 ACCA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27777653 4 + 88276631 ACGG i canFam3.chr4 C 0 C 0 e mm10.chr14 24216505 276 + 124902244 I e chlSab2.chr9 72162226 245 - 125710982 I e rheMac3.chr9 73905567 244 - 130959383 I a score=1486505.000000 s hg38.chr10_KI270825v1_alt 128764 450 + 188315 AGAGTTGCAAGAAGAAAAA-AAATACA----------------------------ACATGCCCAAAAGGTGGTGATGAGGAAAAGGGGAAACTTAGAGGCAGATTGGGGCCAAAAACCTATAGACAACAGCTAGCAGGATTTACCAATGAGAACGGCAAGCAGCTTCTCAAAGAGGGATGCCCCTGCCAACACGGATGCTGAGCTGCAGCAGGAT-----------------------GTCTTCAGCTGGAGGGCGCTCTTGAGCCCATCAGCAGCCAAGGTCTACCTGTCCTACCTCCAAGCCTCTTGTGCTCGTCACTTCCTCTCCACTGCCACGATGTGGCCACACCTCTCATAGCTCAACTCATCTCATCCACCCCACGATTCACcttgggtctctagggtcccaggtttgccatttaccaccacgggcaaggtacataatacctctctgcacctctgattcctcctctataaTGGCACACAGAGGATGAGGTCAATA s panTro4.chr10 76506313 450 + 133524379 AGAGTTGCAAGAAGAAAAA-AAATACA----------------------------ACATGCCCAAAAGGTGGTGATGAGGAAAAGGGGAAACTTAGAGGCAGATTGGGGCCAAAAACCTATAGACAACAGCTAGCAGGATTTAACAATGAGAACGGCAAGCAGCTTCTCAAAGAGGGATGCCCCTGCCAACACGGATGCTGAGCTGCAGCAGGAT-----------------------GTCTTCAGCTGGAGGGCGCTCTTGAGCCCATCAGCAGCCAAGGTCTACCTGTCCTACCTCCAAGCCTCTTGTGCTCGTCACTTCCTCTCCACTGCCACGATGTGGCCACACCTCTCATAGCTCAACTCATCTCATCTACCCCACGATTCACcttgggtctctagggtcccaggtttgccatttaccaccacgggcaaggtacataatacttctctgcacctctgattcctcctctataaTGGCACACAGAGGATGAGGTCAATA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76175697 446 - 133410057 AGAGTTGCAAGAAGAAAAA-AAAT-------------------------------ACATGCCCAAAAGGTGATGATGAGGAAAAGGGGAAACTTAGAGGCAGATTGGGGCCAAAAACCTACAGACAACAGCTAGCAGGATTTACCAATGAGAACGGCAAGCAGCTTCTCAAAGAGGGATGCCCCTGCCAACACTGATGCTGAGCTGCAGCAGGAT-----------------------GGCTTCAGCTGGAGGGAGCTCTTGAGCCCATCAGCAGCCAAGGTCTACCTGTCCTACCTCCAAGCCTCTTGTGCTAGTCACTTCCTCTCCACTGCCATGATGTGGCCACACCTCTCATAGCTCAACT-ATCTCATCCACCCCACGATTCACcttgggtctctagggtcccagctttgccatttaccaccatgggcaaggtacataatacctctctgcgcctctgattccccctctgtaaTGGCACATAGAGGATGAGGTCAATA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35110620 449 + 104879549 AGAGTTGCAAGAAGAAAAA-AAATACA----------------------------ACATGCTCAAAAGGTGGTGATGAGGAAAAGGGGAAACTTAGAGGCAAATTGGAGCCAAAAAGCTATAGACAAAAGCTAGCAGGATTTACCAATGAGAATGGCATGCAGCTTCTCAAAGAGGGATGCCCCTGCCAGCACTGATGCTGAGCTGCAGCAGGAT-----------------------GTCTTCAGCTGGAGGGAGCTCTTGAGCACATCAGCAGCCAAGGTCTACCTGTCCTACCTCCAAGCCTCTTGTGCTCATCACTTCCTCTCCACTGCCACGATGTGGCCACACCTCTCATAGCTCAACT-ATCTCATCCACCCCATGATTCACcttgggtctctagggttccagctttgccatttaccaccacgggcaaggtacataatacctctctgcacctctgattcctcctctataaTGGCACACAGAGGATGAGGTCAATA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73905811 447 - 130959383 AGAGTTGCAAGAAGAAAAA-AAATACA----------------------------ACATGCCCAAAGGGTGGTGATGAGGAAAAGGGGGAACTTAGAGGCAGATTGGGG-CAAAAACCTATAGACAACAGCTAGCAGGATTTACCAATGAGAACGGCAAGCAGCTTCTCAAAGAGGGATGTCCCTGCCAGCACTGATGCTGAGCTGCAGCAGGA------------------------GTCTTCAGCTGGAGGGAGCTCTTGAGCCCATCAGCAGCCAAGGTCTACCTGTCCTACCGCCAAGCCTCTCGTGCTGGTCACTTCCTCTCCACTGCCATGATGTGGCCACATCTCTCACAGCTCAACT-ATCTCATCCACCCCACGATTCACcttgggtttctggggtcccagctgtgccatttagcaccacgggcaaggtacatgatacctctctgcacctctgcttcctcctctataaTGGCACACAGAGGATGAGGTCAATA i rheMac3.chr9 I 244 C 0 s macFas5.chr9 75466131 447 - 133195287 AGAGTTGCAAGAAGAAAAA-AAATACA----------------------------ACATGCCCAAAGGGTGGTGATGAGGAAAAGGGGGAACTTAGAGGCAGATTGGGG-CAAAAACCTATAGACAACAGCTAGCAGGATTTACCAATGAGAACGGCAAGCAGCTTCTCAAAGAGGGATGTCCCTGCCAGCACTGATGCTGAGCTGCAGCAGGA------------------------GTCTTCAGCTGGAGGGAGCTCTTGAGCCCATCAGCAGCCAAGGTCTACCTGTCCTACCGCCAAGCCTCTTGTGCTGGTCACTTCCTCTCCACTGCCATGATGTGGCCACATCTCTCACAGCTCAACT-ATCTCATCCACCCCACGATTCACcttgggtttctaaggtcccagctgtgccatttagcaccacgggcaaggtacatgatacctctctgcacctctgcttcctcctctataaTGGCACACAGAGGATGAGGTCAATA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73329840 447 - 125196307 AGAgttgcaagaagaaaaa-aaataca----------------------------acatgccCAAAGGGTGGTGATGAGGAAAAGGGAGAACTTAGAGGCAGATTGGGG-CAAAAACCTATAGACAACAGCTAGCAGGATTTACCAATGAGAACGGCAAGCAGCTTCTCAAAGAGGGATGCCCCTGCCAGCACTGATGCTGAGCTGCAGCAGGA------------------------GTCTTCAGCTGGAGGGAGCTCTTGAGCCCATCAGCAGCCAAGGTTTACCAGTCCTACCGCCAAGCCTCTTGTGCTGGTCACTTCCTCTCCACTGCCATGATGTGGCCACATCTCTCACAGCTCAACT-ATCTCATCCACCCCACGATTCACCTTGGGTTTCTAGGGTCCCAGCTTTGCCATTTAGCACCACGGGCAAGGTACATAATACCTCTCTGcacctctgcttcctcctctatAATGGCACACAGAGGATGAGGTCAATA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72162471 447 - 125710982 AGAGTTGCAAGAAAAAAAA-AAATACA----------------------------ACATCCCCAAAGGGTGGTGATGAGGAAAAGGGGGAACTTAGAGGCAGATTGGGG-CAAAAACCTATAGACAACAGCTAGCAGGACTTACCAATGAGAAGGGCAAGCAGCTTCTCAAAGAGGGATGTCCCTGCCAGCACTGATGCTGAGCTGCAGCAGGA------------------------GTCTTCAGCTGGAGGGAGCTCTTGAGCCCATCAGCAGCCAAGGTCTACCTGTCCTACCGCCAAGCCTCTTGTGCTGGTCACTTCCTCTCCACTGCCACGATGTGGCCACACCTCTCACAGTTCAACT-ACCTCATCCACCCCACGATTCACcttgggtttctagggtcccagctttgccatttagcaccacgggcaaggtacataatacctctctgcacctctgtttcctcctctataaTGGCACACAGAGGATGAGGTCAATA i chlSab2.chr9 I 245 C 0 s calJac3.chr12 75621807 423 - 121768101 AGAGTTGCAAGACGGAAAA-AAACATG----------------------------ACATGCCCAAAGGGTGGTGGCGAGGAAAATGGAAAACTTAGAGGCAGACTGAGGCCAAAAACCTATAGACAACAGCTGGCAGGACTTACCAATGA-------AAGCAGCTTCTCAAAGAGGGATGTCCCTGCCAGCACTGAT-----------------------------------------GTCTTCAGCTGGAGGGAGCTCTTGAGCCCATCAGCAGCCAAGGTCTACC-ATCCTACCTCCAAGCCTCTTGCGTGCATCACTTCCTCTCCACTGCCACAATGTGGCCACACCTCTCACAGCTCAACT-ATCTCATCCGCCCCACCATTCACcttgggtctctaggatcccagctttgccatgtatcaccatgggcaaggtacataatgcctctctgcacctctgcttcctcctctacaaTGGTACACAGAGGATGAGGTCAATA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27777657 457 + 88276631 AAAGTTGCAAAAAAAGGAATAAATAAAAGCTCTGGAGGAACAGACTACCGTCTTTACGTGCCCAAAGTGTGATGAGGAGGAAAAGGAGAAACTCAGAGGCAGACTGGGGCCAAAAACCAGGAGATAACAAGTGGCAGGATCCACCAATGAGAAAGGCAAGCTGCTTCTCAACATGGGGTGCCCCCACCCTTGCTGCCCCTGAGCCACAGCAAGATGCCACCCATCAGGACTGCACAACATCTTCAGCTGCTGGGAACTCCTGACAACGAGAGCCACACAGGTGCCCACATCC-ACCACCCAG-------------------------------------------GCATCGCTCAGAGCTCAAAAGCTTTCACTGGCCCTCAGATTCacctcgagtctctagggtcccagctccaccacctaccaccacgggcaaggtacctaacacctgtctgcacctctacttcctcacctgcaaaGGCCCG-GGAGGATTAAGAGAATA i canFam3.chr4 C 0 I 53 e mm10.chr14 24216505 276 + 124902244 I a score=19004.000000 s hg38.chr10_KI270825v1_alt 129214 6 + 188315 ATTACA s panTro4.chr10 76506763 6 + 133524379 ATTACA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76176143 6 - 133410057 ATTACA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35111069 6 + 104879549 ATTACA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73906258 6 - 130959383 ATTACA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75466578 6 - 133195287 ATTACA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73330287 6 - 125196307 ATTACA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72162918 6 - 125710982 ATTACA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75622230 6 - 121768101 ATCACA i calJac3.chr12 C 0 C 0 e canFam3.chr4 27778114 53 + 88276631 I e mm10.chr14 24216505 276 + 124902244 I a score=417777.000000 s hg38.chr10_KI270825v1_alt 129220 177 + 188315 CTTTACggccgggcacggtggttcacgcctgtaatcccaacactttgggaggccgaggcatgcagatcacctgaggtcgggagttcaataccagcctgaccaacatggagaaacccc-atctctactaaaaatacaaaattagctgggcatagtggcgcatgcctgtaaATAATTATG s panTro4.chr10 76506769 177 + 133524379 CTTTACggccgggcacggtggttcacgcctgtaatcccaacactttggggggccgaggcatgcagatcacctgaggtcgggagttcaagaccagcctgaccaacatggagaaacccc-atctctactaaaaatacaaaattagctgggcatagtggcgcatgcctgtaaATAATTATG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76176149 177 - 133410057 CTTTACggccaggcatggtggttcacgcctgtaatcccaacactttgggaggccgaggcatgcggatcacctgaggtcgggagttcaagaccagcctgaccaacatggagaaacccc-atctctactaaaaatacaaaattagccgggcatagtggcacatgcctgtaaATAATTATG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35111075 177 + 104879549 CTTTATggccgggcatggtggttcacgcctgtaatcccaacactttgggaggccgaggcatgcggatcacctgaggtcggaagttcaagaccagcctgaccaacatggagaaacccc-atctctactaaaaatacaaaattagccgggcatagcggcacatgcctgtaaATAATTATG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73906264 178 - 130959383 CTTTACggccaggcgcggtagttcacgcctgtaatcccaatacttagggtggacgaggcatgtgcaccacctgaggtcgggagttcgagaccagcctgaccaacatggagacaccccagtctccactaaaaagacaaaattagccaggcatagtggcacatacctgtaaATAATTATG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75466584 178 - 133195287 CTTTACggccaggcgcggtagttcacgcctgtaatcccaatactttgggaggacgaggcatgtggaccacctgaggtcgggagttcgagaccagcctgaccaacatggagacacccccgtctccactaaaaagacaaaattagccaggcatagtggcacatacctgtaaATAATTATG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73330293 178 - 125196307 CTTtacggccaggcgcggtagttcacgcctgtaatcccaatactttgggagaacgaggcatgtggaccacctgaggtcgggagttcgagaccagcctgaccaacatggagacacccccgtctctactaaaaagacaaaattagccaggcatagtggcacatacctgtaaatAATTATG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72162924 178 - 125710982 CTTTACggccaggcgcggtagttcacgcctgtaatcccaacactttggaaggacgaggcatgtggaccacctgaggtcgggagttcgagaccagcctgaccaacatggagaaacccctgtctctactaaaaagacaaaattagccaggcatagtggcacatacctgtaaATAATTATG i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27778114 53 + 88276631 I e mm10.chr14 24216505 276 + 124902244 I e calJac3.chr12 75622236 0 - 121768101 C a score=187767.000000 s hg38.chr10_KI270825v1_alt 129397 60 + 188315 CTTTACACTTGGATGTCTCAAGGTAGCGCTGGAGTAGTTATTCTGAGCTACTGGAA-TATC s panTro4.chr10 76506946 60 + 133524379 CTTTACACTTGGATGTCTCAAGGTAGCGCTGGAGTAGTTATTCTGAGCTACTGGAA-TATC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76176326 60 - 133410057 CTTTACACTTGGATGTCTCAAGGTAGCACTGGAGTAGTTATTCTAAGCTACTGGAA-TATC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35111252 60 + 104879549 CTTTACACTTGGATGTCTCAAGGTAGCACTGGAGTAGTTATTCTGAGCTACTGGAA-TATC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73906442 60 - 130959383 CTTTACACTTGGGCGTCTCAAGGTAGCTCTGGAGTAGTTATTCTGAGCTACTGGAA-TATC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75466762 60 - 133195287 CTTTACACTTGGGCGTCTCAAGGTAGCTCTGGAGTAGTTATTCTGAGCTACTGGAA-TATC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73330471 60 - 125196307 CTTTACACTTGGGCGTCTCAAGGTAGCTCTGGAGTAGTTATTCTGAGCTACTGGAA-TATC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72163102 60 - 125710982 CTTTACACTTGGGCGTCTCAAGGTAGCTCTGGAGTAGTTATTCTGAGCTACTGGAA-TATC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75622236 61 - 121768101 CTTTACACTTGGGTGTCTCAAGGTAGCTCTGGAGTAGCTATTCTGAGCTACTGGAGTTATT i calJac3.chr12 C 0 C 0 e canFam3.chr4 27778114 53 + 88276631 I e mm10.chr14 24216505 276 + 124902244 I a score=2651883.000000 s hg38.chr10_KI270825v1_alt 129457 825 + 188315 AGCGAGTGCCACCTCCAGAGGGAGCTTCCCAGAGCCCAGCCCTGTACCATCTCTGAGCTTCCAGGAGTCCCCAGCTCTCC-----AGCCGCAGAATAAAACCTGCCTGGAAGCTGGCACTGGAGGGTCTCCATGGGCCCAGCCTAACCTGTCCACACCCTCCCAGGGCTCCCCCTTCTACCACCCACACTTCTGGCCAGACTATAGTGCCACTTGCTTATCACACCCAGCCCATTCCCAGGTGTTCCCATTCAGTTTTCTGATTCCACCATCACTACTGCCTCTACCAACATCCCAACCGACCCTTCAGGCCCAGC-TCAAATGAGACCTCTCCGAGGAGTTTCCCAGATCCCCCTACCCAGGAATGACCTGCTCCCCTAT---CTCCCTATGCATGCCTCCCTATGGTTCTAGCTGATGTCTACTAGGCCTGGCTTCACCTATGAGGCTG-GGGTcagggtggtttcatggatgtgtgaccttgtgcagtctcacaaggctcacaattggcttcgcactctgctgttgccatcgtgaaatcctcaatgatttatgtgccgcaaggagctcccaattttcattttgcactgggcctgcaaactGCAAACTGCAGATGTGGTCCTGCTGAGGACTTCTCAAGGATGAGGCtttggtttatctct-gcat-ctcacagactgcagcagtgactgggacacagtaaggacttaacaaaGGAGGGAAGGTGGTGAGTCTCCATGTCTCTTTGTTCTGTGAGCAG---------------CTGTCACCTCACACA-GCTCATTATTCATAGGCTGGTGAGCTCACCT-CTGTCCCCCAACAGacacacacacacacaca s panTro4.chr10 76507006 825 + 133524379 AGCGAGTGCCACCTCCAGAGGGAGCTTCCCAGAGCCCAGCCCTGTACCATCTCTGAGCTTCCAGGAGTCCCCAGCTCTCC-----AGCCTCAGAATAAAACCTGCCTGGAAGCTGGCACTGGAGGGTCTCCATGGGCCCAGCCTAACCTGTCCACACCCTCCCAGGGCTCCCCCTTCTACCACCCATACTTCTGGCCAGACTATAGTGCCACTTGCTCATCACACCCAGCCCATTCCCAGGTGTTCCCATTCAGTTTTCTGATTCCACCATCACTACTGCCTCTACCAACATCCCAACTGACCCTTCAGGCCCAGC-TCAAATGAGACCTCTCCGAGGAGTTTCCCAGATCCCCCTACCCAGGAATGACCTGCTCCCCTAT---CTCCCTATGCATGCCTCCCTATGGTTCTAGCTGATGTCTACTAGGCCTGGCTTCACCTATGAGGCTG-GGGTcagggtggtttcatggatgtgtaaccttgtgcagtctcacaaggctcacaattggcttcgcactctgctgttgccatcgtgaaatcctcaatgatttatgtgctgcaaggagctcccaattttcattttgcactgggcctgcaaactGCAAACTGCAGATGTGGTCCTGCTGAGGACTTCTCAAGGATGAGGCtttggtttatctct-gcat-ctcacagcctgcagcagtgactgggacacagtaaggacttaacaaaGGAGGGAAGGTGGTGAGTCTCCATGTCTCTTTGTTCTGTGAGCAG---------------CTGTCACCTCACACA-GCTCATTATTCATAGGCTGGTGAGCTCACCT-CTGTCCCCCAacagacacacacacacacaca i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76176386 825 - 133410057 AGCAAGTGCCACCTCCAGAGGGAGCTTCCCAGAGCCCAGCCCTGTACCATCTCTGAGCTTCCAGGAGTCCCCAGCTCTCC-----AGCCTCAGAATGAAACCTGCCTGGAAGCTGGCACTGGAGGGTCTCCATGGGCCCAGACTAACCTGTCCACACCCTCCCAGGGCTCCCCCTTCTACCACCCACGCCTCTGGCCAGACTATAGTGCCACTTGCTCATCACATCCAGCCCATTCCCAGGTGTTCCCATTCAGTTTTCTGATTCCACCATCACTACTGCCTCTACCAACATCCCAGCCGACCCTTCAGGCCCAGC-TCAAATGAGACCTCTCCGAGGAGTTTCCCAGATCCCCCTACCCAGGAATGACCTGCTCCTCTAT---CTCCCTATGCATGCCTCCCTATGGTTCTAGCTGATGTTTACTAGGCCTGGCTTCACCTATGAAGCTG-GGGTcagggaggtttcttggatatgtgaccttgtgcagtctcacaagactcacaattggcttcacactctgctgttgccatcgtgaaatcctcaatgatttatgtgctgcaaggagctcccaattttcatttttcactgggcctgcaaactGCAAACTGCAGATGTGGTCCTGCTGAGGACTTCTcaaggatgaggttttggtttatctct-gcat-ctcacagcctgcagcagtgactgggacacagtaaggacttaacaaaGGAGGGAAGGTGGTGAGTCTCCATGTCTCTTTGTTCTGTGAGCAG---------------CTGTCACCTCACACA-GCTCATTATTCATAGGCTAGTGAGCTCACCT-CTGTCCCCCAAAAGacacacacacacacaca i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35111312 824 + 104879549 AGCGAGTGCCACCTCCAGAGGGAGCTTCCCAGAGCCCAGCCCTATACCATCTCTGAGCTTCCAGGAGTCCCCAGCTCTCC-----AGCCTCAGAATAAAACCTGCCTGGAAGCTGGCACTGCAGGGTCTCCATGGGCCCAGCCTAACCTGTCCACACCCTCCCAAGGCTCCCCCTTCTACCACCCACGCCTCTGGCCAGACTATAGTGCCACTTGCTCATCACACCCAGCCCATTCCCAGGTGTTCCCATTCAGTTTTCTGATTCCACCATCACTACTGCCTCTACCAACATCCCAGCCGACCCCTCAGGCCTAGA-TCAAATGAGACCTCTCTGAGGAGTTTCCCAGATCCCCCTACCCAGGAATGACCTGCTCCCCTAT---CTCCCTATGCATGCCTCCCTATGGTTCTAGTT-ATGTCTACTAGGCCTAGCTTCACCTATGAGGCTG-GGGTcagggtggtttcatggatgtgtgaccttgcgcagtctcacaaggcccacagttggcttcacactctgctgttgccatcatgaaatcctcagtgatttatgtgctgcaaggagctcccaattttcattttgcgctgggcctgcaaactGCAAACTGCAGATGTGGTCCTGCTGAGGACTTCTCAAGGATGAGGCTTTGGTTTATCTCT-GCAT-CTCACAGGCTGCAACAATGACTGGGACACAGCAAGGACTTAACAAAGGAAGGAAGGTGGTGAGTCTCCATGTCTCTTTGTTCTGTGAGCAG---------------CTGTCACCTCACACA-GCTCATTATTCATAGGCTGGTGAGCTCACCT-CTGTCCCCCAACAGacacacacacacacaca i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73906502 815 - 130959383 AGCAAGTGCCACCTCCAAAGAGAGCTTCCCAGAGCCC-ATCCTGCACAATCTCTGAGCTTCCAGGAGTCCCCAGCTCTTCTCTGTAGCCTCAGAATAAAACCTGCCCAGAAGCTGGCACTGGAGGGTCTCCATGGGCCCAGCCTAACCTGTCCATACCCTCCCAGGGCTCCCCCTTCTACCACCCATACCTCTGGCCAGACTATAGTGCCATGTGCTCATCACACCCAGCCCATTCCCTGGTGTTCCCATTCGGTTTTCTGAttccaccatcactactgcctctaccaacatcccagccgacccttcaagcccagc-tcaaatgagacctctccgaggagtttcccagatccccctactcaggaatgacctgctcccctat---ctccctatgcatgcctc--------tctaactgatgtctactaggtctggcttcacctatgaggctg-ggaccagggtggtttcatggatgtgtgaccttgtgcagtctcacaaggcccacaattggcttcacactctgctgctgccatgatgaaatcctcaatgatttatgtggagaaaggagctcccgattttcattttgcactgggc-------ctgcaaactgcagatgcggtcctgctggggacttctcaaggatgaggctttggtttatctct-gcat-ctcacagcctgcagcagtgattggggcacagtaaggacttaacaaaGGAGGGAAGGTGGTGAGTCTCCACGTCTCTTTGTTCTGTGAGCAG---------------CTGTCACCCCACACAGGCTCGTTATTCATAGGCTGGTGAGCTCACCT-CTGTCCCCCAacacacacacacacgcacaca i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75466822 815 - 133195287 AGCAAGTGCCACCTCCAAAGAGAGCTTCCCAGAGCCC-ATCCTGCACAATCTCTGAGCTTCCAGGAGTCCCCAGCTCTTCTCTGTAGCCTCAGAATAAAACCTGCCCAGAAGCTGGCACTGGAGGGTCTCCATGGGCCCAGCCTAACCTGTCCATACCCTCCCAGGGCTCCCCCTTCTACCACCCATACCTCTGGCCAGACTATAGTGCCATGTGCTCATCACACCCAGCCCATTCCCTGGTGTTCCCATTCGGTTTTCTGAttccaccatcactactgcctctaccaacatcccagccgacccttcaagcccagc-tcaaatgagacctctccgaggagtttcccagatccccctactcaggaatgacctgctcccctat---ctccctatgcatgcctc--------tctaactgatgtctactaggtctggcttcacctatgaggctg-ggaccagggtggtttcatggatgtgtgaccttgtgcagtctcacaaggcccacaattggcttcacactctgctgctgccatgatgaaatcctcaatgatttatgtggagaaaggagctcccgattttcattttgcactgggc-------ctgcaaactgcagatgcggtcctgctggggacttctcaaggatgaggctttggtttatctct-gcat-ctcacagcctgcagcagtgattggggcacagtaaggacttaacaaaGGAGGGAAGGTGGTGAGTCTCCACGTCTCTTTGTTCTGTGAGCAG---------------CTGTCACCTCACACAGGCTCATTATTCATAGGCTGGTGAGCTCACCT-CTGTCCCCCAacacacacacacacacacaca i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73330531 815 - 125196307 AGCAAGTGCCACCTCCAAAGAGAGCTTCCCAGAGCCC-GTCCTGCACAATCTCTGAGCTTCCAGGAGTCCCCAGCTCTTCTCTGTAGCCTCAGAATAAAACCTGCCCAGAAGCTGGCACTGGAGGGTCTCCATGGGCCCAGCCTAACCTGTCCATACCCTCCCAGGGCTCCCCCTTCTACCACCCATACCTCTGGCCAGACTATAGTGCCATGTGCtcatcacacccagcccattcCCTGGTGTTCCCATTCGGTTTTCTGATTCCACCATCACTACTGCCTCTACCAACATCCCAGCCGACCCTTCAAGCCCAGC-TCAAATGAGACCTCTCCGAGGAGTTTCCCAGATCCCCCTACTCAGGAATGACCTGCTCCCCTAT---CTCCCTATGCATGCCTC--------CCTAGCTGATGTCTACTAGTCCTGGCTACACCTATGAGGCTG-GGACCAGGGTAGTTTCATGGATGTGTGACCTTGTGCAGTCTCACAAGGTCCACAATTGGCTTCACACTCTGCTGCTGCCATGGTGAAATCCTCAATGATTTATGTGGAGAAAGGAGCTCCCgattttcattttgtactgggC-------CTGCAAACTGCAGATGCAGTCCTGCTGGGGACTTCTCAAGGATGAGGCTTTGGTTTATCTCT-GCAT-CTCACAGCCTGCAGCAGTGATTGGGGCACAGTAAGGACTTAACAAAGGAGGGAAGGTGGTGAGTCTCCACGTCTCTTTGTTCTGTGAGCAG---------------CTGTCACCTCACACAGGCTCCTTATTCATAGGCTGGTGAGCTCACCT-Ctgtcccccaacacacacacacacacacaca i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72163162 821 - 125710982 AGCAAGTGCCACCTCCAAAGAGAGCTTCCCAGAGCCC-GTCCTGCACAATCTCTGAGCTTCCAGGAGTCCCCAGCTCTTCTCTGTTGCCTCAGAATAAAACCTGCCCAGAAGCTGGCACTGGAGGGTCTCCATGGGCCTAGCCTAACCTGTCCATACCCTCCCAGGGCTCCCCCTTCTACCACCCATACCTCTGGCCAGACTATAGTGCCATGTGCTCATCACACTCAGCCCATTCCCCGGTATTCCCATTCGGTTTTCTAAttccaccatcactactgcctctaccaacatcccagccgacccttcaagcccagc-tcaaatgagacctctccgaggagtttcccagatccccctactcaggaatgacctgctcccctat---ctccctatgcatgcctctctatggttctagctgatgtctactaggcctggcttcacctatgaggctg-ggaccagggtggtttcatggacgtgtgaccttgtgcagtctcacaaggcccacaactggcttcacactctgctgctgccatcgtgaaatcctcaatgatttacgtggaaaaaggagctcctgattttcattttgcactgggc-------ctgcaaactgcagatgcggtcctgctggggacttctcaaggatgaggctttggtttatctct-gcat-ctcacagcctgcagcagtgattggggcacagtaaggacttaacaaaGGAGGGAAGGTGGTGAGTCTCCACGTCTCTTTGTTCTGTGAGCAG---------------CTGTCACCTCACACAGGCTCATTATTCATAGGCTGGTGAGCTCACCT-CTGTCCCCCAacacacacacacacacaca-- i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75622297 820 - 121768101 AGTGAGTGCCACCTCCAGAGGGAGCTTCCCAGAGCCCAGCCTCGCACCATCTCTGAGCTTCTAGGTGT-CCCAGCTCTTCTTTCCAGCCTCAGAATAAACCCTGCTCAGAAGCTGGCACTGAAGGGTCTCCATGGGCCCAGCTCAACCTGTCCTCACCTTCCCAGGACTCCCCCTTCTACCACCTATGCCTCTGGCCAGGCTATAGTGCCACTTGCTCATCACACTCAGCCCATTCACAGGTGTTCCCACTCAGTTTTCTGATTCCACCATCACTACTGCCTCTACCAACAGGCCAGCTGACCCTTCAGGCCCAGC-TCAAATAAGACCTCTCCGAGGGGTTTCCCAGATCCCCCTACCTGGAAATGACCTGCTCCCCTAT---CTCCCTATGCGTGCCTTCCTATGGTTCTAGCTGATGTCTACTAGGCCTGGCTTCACCTATGAGGCTA-AGACcagggtggtttcatagatatgtgaccttgtgcagtctcacaaggcccacaattagcttcaca--ctgctgttgacatcgtgaaatcctcaatgatttatatggtgcaaagagctcccgattttcattttccgctgggc-------ctgcaaactGCAGATGGGGTCCTGCTGAGGACTTTTCAAGGTTGAGGCtttggtttatctct-gcat-ctcacagcctgcagcagtgactgggacacagtaaggacttaacgaaGGAGGCAAAGTGGTGAGTCTCCATGTCTCTCTGTTTTGTGGGCAG---------------CTGTCACCTCACACA-GCTCAATATTCATATGCTGATCAGCTCACCT-CTGTCCCCCAacacacacacacacacacaca i calJac3.chr12 C 0 I 56 s canFam3.chr4 27778167 760 + 88276631 GGCGAGCACCA-ATCCCCAGAGCACTTCCCAGAGCCCAG--CTGTGCCATCTCTAAGCTCCCAGCAACCGCT-------------GGCTGCAGAATAAAGCCTGCCTGCAGGCTGGCATTGGAGAGTCT---TGGACCCAACTG---CTGCCCACCC----------------------CCACCCAGCCCGCCAGCCAGGCTGCGGGCCCACGTGCTCATCACTCCCTGCCC--------GTGGGCACAC------TTCTGCCTCCACCATCACCACCACCTCCACCAGAGCcccagccatccctccaggtccagctttaaaggcgccctctccaaggagccttccccatccctccatctggaaatctcctgtcctaccatgacctgcttgtacttgctt----atggttctaaccaCCGTCTGCCAG-CCAGGCTCTGCCCATGAGGCTGAGGACcagggccggcgtcagggtgcacagcc-cgtgcagcctcacga-acccacacccagcttcatgctccactgtcctcgccttg--gttcttagtgatttatgagc----aggggccctgcatattcaacttgcaccaggc-------cag-aaattaagtatccagtcctgCCGATGACAGCCCAAGGAAGAAGATTTAGCTAACCTCTCTCATCCCCACAGCACCCAGTACTACTTGCGACACCGGAGGGAGTC----AGGGAGGAAAGGAGGGGAGAGTCCGGGTATCTCCACTCTGTGAAGATAGTGAAGGTACATCCTTGCCACCCCGGGCG-GCCCACTCACACAGGGCAAGCTAACTTTCCTACCTTTCTCCTTCCCTCCCGCC---------- i canFam3.chr4 I 53 C 0 e mm10.chr14 24216505 276 + 124902244 I a score=27377.000000 s hg38.chr10_KI270825v1_alt 130282 29 + 188315 cacacacaca------------------------------------------------------------------cacacacacacacacGAGA s panTro4.chr10 76507831 29 + 133524379 cacacacaca------------------------------------------------------------------cacacacacacacacGAGA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76177211 19 - 133410057 cacacacaca------------------------------------------------------------------cacacacac---------- i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35112136 29 + 104879549 cacacacaca------------------------------------------------------------------cacacacacacacacGAGA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73907317 95 - 130959383 cacacacacacacacacacacacacacgcacacacacgcacgcacgcacacacacgcacgcacgcacgcacgcacgcacacacacacacacGTGA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75467637 29 - 133195287 cacacacaca------------------------------------------------------------------cacacacacacGCACGTGA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73331346 23 - 125196307 caca------------------------------------------------------------------------cacacacacacgcacgtga i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72163983 19 - 125710982 ----------------------------------------------------------------------------cacacacacacacacGTGA i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27778927 29 + 88276631 CTCCTGCCCC------------------------------------------------------------------CTAGTGCTCACACAGCAGA i canFam3.chr4 C 0 C 0 e mm10.chr14 24216505 276 + 124902244 I e calJac3.chr12 75623117 56 - 121768101 I a score=372116.000000 s hg38.chr10_KI270825v1_alt 130311 109 + 188315 AGAAAGCAACAATTCAGCTCAGCTCATTCCCAAAAGCCACATTCCCTCCAA--CCCCGCTACACATCACTCCCACAGGACATCACAAAAAAAGGTCGCTGGATCCTACTGA s panTro4.chr10 76507860 109 + 133524379 AGAAAGCAACAATTCAGCTCAGCTCATTCCCAAAAGCCACATTCCCTCCAA--CCCCGCTACACATCACTCCCACAGGACATCACAAAAAAAGGTCGCTGGATCCTACTGA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76177230 108 - 133410057 GAGAAGCAACAATTCAGCTCAGCTCATTCCC-AAAGCCACATTCCCTCCCA--CCCCGCTGCACATCACTCCCACAGGACATCACAAAAAAAGGTCCCTGGATCCTACTGA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35112165 109 + 104879549 AGAAAGCAACAATTCAGCTCAGCTCATTCCCAAAAGCCACATTCCCTCCCA--CCCTGCTACACATCACTCCCACAGGACATCCCAAAAAATGGTCCCTGGATCCTACTGA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73907412 108 - 130959383 AGAAAGCAACAATTCAGCTCAGCTCATTCCCAAAAGCCACATTCCTTCCCA--CCCCGCTACACATCATTCCCACAGGACATCACAAAAAA-GGTCCCTGGATCCTACTGA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75467666 108 - 133195287 AGAAAGCAACAATTCAGCTCAGCTCATTCCCAAAAGCCACATTCCTTCCCA--CCCCGCTACACATCATTCCCACAGGACATCACAAAAAA-GGTCCCTGGATCCTACTGA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73331369 108 - 125196307 aGAAAGCAACAATTCAGCTCAGCTCATTCCCAAAAGCCACATTCCCTCCCA--CCCCGCTACACATCATTCCCACAGGACATCACAAAAAA-GGTCCCTGGATCCTACTGA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72164002 108 - 125710982 AGAAAGCAACAATTCAGCTCAGCTCATTCCCAAAAGCCACATTCCCTCCCA--CCCTGCTACACATCATTCTCACAGGACATCACAAAAAA-GGTCCCTGGATCCTACTGA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75623173 107 - 121768101 GGAGAGCAACAATTCAGCTCAGCTCATTCCCAAAAGCCACATTCCCTCCCA--CCCCGCTACACATCATTCCCACAGGACATCACAAAAA--GGTCCCTGGATCCTACTGA i calJac3.chr12 I 56 C 0 s canFam3.chr4 27778956 105 + 88276631 GAAAAG----AACTCCCCTCAGCTCATTCTCTATACTCATGTTCCCCTCTGGTCCCCACTACACATCACTC-CACAGGACACCATGAAAAA-GGCCCTTGGACCCAAATGA i canFam3.chr4 C 0 C 0 e mm10.chr14 24216505 276 + 124902244 I a score=4590054.000000 s hg38.chr10_KI270825v1_alt 130420 1386 + 188315 AAATGCAGCCCCTCAGCACTTCATCTCAAACACT-------TTCTCCCA--------CAGCAGGTGGCTGAGGGCtggtgtgctgaaaagctcacattctgc-----------a-tgcgggaacactgactccggagccatc-------cggctctgctgcttgctggctgtataactttgaatgagtcccctagcACAAGGCCCAGAAAGGGGGAACCCTCA-GGGATCTGGCTGTCCCCAG-----CCCTGCCCCTC--TCTCAGACTCGACCCTGCCTCTTTCTGCAGGTTGGCTCAGAGACACAGGCCCCCAGG-GATCACAGCACCCTGCCCTCATCATCTGCATTTATGGTCCCCACAAGTCCCAGACTCGGGAGGACGGACACACCCACAGGCCAAACAAGGCATTAGGAACATGGGATGGCA-CAGCTTCCTGGGATGCCCCAGCTTCCCGGGATGCCCCAGCTAATGG-----AATCGCACCCAGTCCTGGCTCTGAT-CGCAGTAGCACATCTGACACGTGCCCTCAATCCCTCCCTACCTCGTGACCCATAAGCAGCCTTTTGGCACAGGCACACAGCCATTAGTCAAG-CAACCTGTGAGAAAAACACT-----GCCTGGCCATGCAAAACA---AATGTAGGTGGCCCATTAGAAAGTGAGGACTTGTTTGTGAAAAGGTACATGTATGGAATGCAACAGCCTCCTCCCTCTGTATCTGACTTGGGAGCACTTTCATCATAAAATTTTGGTTGACACTAGATGTGTTCTTACTTGTAAGACAGCACAGTTATCAGGAagagtcacagaatgtcaacaacagaaggga----ccc-caaagataaagtagtccagtgc-cc-catttgacagatggggaaactgaggcc------------------------tctgtgttcccagggcc----ccagcctgc--------tccccttgga-cactgcacctgtgtactatattgccaatgactgttt-acaagacacctcgcacaccagacagtgaattcctggagaccagggtggtacc---ttcatc---tctgctgccctagcttccctcacagggccaggcagccaggagacacccaataaaggattgctgaatTTCAAAACAATACG-TGTACATGATAAATATATACAGTATTTGT---------------------CCATTTTAAAGGGTA--------------------------------------------ATCAAGTTTTTA--------------------AAATGAAAAT---AAAGGATTGCTGAATAAATGAACAA-CCAGAGAGGCGGCCAC-CAGCCAAGGACAAACAAAGCTGAATCTGGAACACTGGCTTCCTGCTGTCCTCTCAGACTAAACGCAGTAGGTACTGGGTCACTGGGAGAA------------------TGGCAAGGCC---AGTAT-gctgtgtgt-gcagggacagggcacccccaggttgggagccaagcctagtcccagccctgcctctggcattggcattggcgtgctagccatttgaccaccagagcagcccc---------tctctgaagctcagtttct s panTro4.chr10 76507969 1386 + 133524379 AAATGCAGCCCCTCAGCACTTCATCTCAAACACT-------TTCTCCCA--------CAGCAGGTGGCTGAGGGCtggtgtgctgaaaagctcacattctgc-----------a-tgcgggaacactgactccggagccatc-------cggctctgctgcttgctggctgtataactttgaacgagtcccctagcACAAGGCCCAGAAAGGGGGAACCCTCA-GGGATCTGGCTGTCCCCAG-----CCCTGCCCCTC--TCTCAGACTCGACCCTGCCTCTTTCTGCAGGTTGGCTCAGAGACACAGGCCCCCAGG-GATCACAGCACCCTGCCCTCATCATCTGCATTTATGGTCCCCACAAGTCCCAGACTCGGGAGGACAGACACACCCACAGGCCAAACAAGGCATTAGGAACATGGGATGGCA-CAGCTTCCTGGGGTGCCCCAGCTTCCCGGAATGCCCCAGCTAATGG-----AATCGCACCCAGTCCTGGCTCTGAT-CACAGTAGCACATCTGACACGTGCCCTCAATCCCTCCCTACCTCGTGACCCATAAGCAGCCTGTTGGCACAGGCACACAGCCATTAGTCAAG-CAACCTGTGAGAAAAACACT-----GCCTGGCCATGCAAAACA---AATGTAGGTGGCCCATTAGAAAGTGAGGACTTGTTTGTGAAAAGGTACATGTATGGAATGCAACAGCCTCCTCCCTCTGCATCTGACTTGGGAGCACTTTCATCATAAAATTTTGGTTGACACTAGATGTGTTCTTACTTGTAAGACAGCACAGTTATCAGGAagagtcacagaatgtcaacaacagaaggga----ccc-caaagataaagtagtccagtgc-cc-catttgacagatggggaaactgaggcc------------------------tctgtgttcccagggcc----ccagcctgc--------tccccttgga-cactgcacctgtgtactgtattgccaatgactgttt-acaagacacctcacacaccagacggtgagttcctggagaccagggtggtacc---ttcatc---tctgctgccctagcttccctcacagggccaggcagccaggagacacccaataaaggattgctgaatTTCAAAACAATACG-TGTACATGATAAATATATACAGTATTTGT---------------------CCATTTTAAAGGGTA--------------------------------------------ATCAAGTTTTTA--------------------AAATGAAAAT---AAAGGATTGCTGAATAAATGAACAA-CCAGAGAGGCGGCCAC-CAGCCAAGGACAAACAAAGCTGAATCTGGAACACTGGCTTCCTGCTGTCCTCTCAGACTAAACGCAGTAGGTACTGGGTCACTGGGAGAA------------------TGGCAAGGCC---AGTAT-gctgtgtgt-gcagggacagggcaccccctggttgggagccaagcctagtcccagccctgcctctggcattggcattggcgtgctagccatttgaccaccagagcagcccc---------tctctgaagctcagtttct i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76177338 1368 - 133410057 AAATGCAGCCCCTCAGCACTTCATCTCAAACACT-------TTCTCCCA--------GAGCAGGTGGCTGAGGGCtggtgtgctgaaaagctcacattctgc-----------a-tgcgggaacactgactcgggagccatc-------cggctctgctgctt-ctggctgtataactttgaatgagtcccctagcACAAGGCCCAGAAAGGGGGAACCCTCA-GGGATTTGGCTGTCCCCAG-----CCCTGCCCCTC--TCTCAGACTTGACCCTGCCTCTTTCTGCAGGTTGGCTCAGAGACACAGGCCCTCAGG-GATCACAGCACCCTGCCCTCATCATCTGCATTTATGGTACCCACAAGTCCCAGACTCAGGAGGACGGACACACCCACAGGCCAAACAAGGCATTAGGAACCAGGGATGGCG-CAGCTTCCTGGG------------------ATGCCCCAGCTAATGG-----AATCGCACCCAGTCCTGGCTCTGAT-CGCAGTAGCACATCTGACACGTGCCCTCAATCCCTCCCTACCTCGTGACCCATAAGCAGCCTGTTGGCACGGGCACACAGCCATTAGCCAAG-CAACCTGTGAGAAAAACACT-----GCCTGGCCATGCAAAACA---AATGTAGGTGGCCCATCAGAAAGTGAGGACTTGTTTGTGAAAAGGTACATGTATGGAATGCAACAGCCTCCTCCCTCTGCATCTGACTTGGGAGCACTTTCATCATAAAATTTTGGTTGACACTAGATGTGTTCTTACTTGTAAGAGAGCACAGTTATCAGGAagagtcacagaatgtcaacaacagaaggga----ccc-caaagataaagtagtccagtgc-cc-catttgacagatggggaaactgaggcc------------------------tctgtgttcccagagcc----ccagcctgc--------tccccttgaa-cactgcacctgtgcactgtattgccactgactgttt-acaagccacctcacacaccagacggtgagttcctggaggccagggtggtacc---ttcatc---tctgctgccctagcttccctcacagggccaggcagtcaggaggcacccgataaaggattgctgaatTTCAAAACAATACG-TGTACATGATAAATATATACAGTATTTGT---------------------CCATTTTAAAGGGTA--------------------------------------------ATCAAGTTTTTA--------------------AAATGAAAAT---ACAGGATTGCTGAATAAATGAACAA-CCAGAGAGGCGGCCATGCAGCCAAGGACAAACAAAGCTGAATATGGAACACTGGCTTCCTGCTGTCCTCTCAGACTAAACGCAGTAGGTACTGGGTCACTGGGAGAA------------------TGGCAAGGCC---AGTAT-gctgtgtgt-gcagggacagggcacccccaggctgggagccaagcctggtcccagccctgcctctggcattggcattggcgtgctagccatttgaccaccagagcagccct---------tctctgaagctcagtttct i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35112274 1363 + 104879549 AAATGCAGCCCCTCAGCACTTCGTCTCAAACACT-------TTCTCCCA--------GAGCAGGTGGCTGAGGGCTGGTGTGCTGAAAAGCTCACATTCTGC-----------A-TGCGGGAACACTGACTCCAGGGCCatc-------cggctctgctgcttgctggctgtataactttgaacgagtcccctagcACAAGGCCCAGAAAGGTGGAACCCTCA-GGGACCTGGCTGTCCCCAG-----CCCTGCCCCTC--TCTCAGACTCGACCCTGCCTCTTTCTGTAGGTTGGCTCAGAGACACAGGCCCCCAGG-GATCACAGCACCCTGCCCTCATCATCTGCATTTATGGTCCCCACAAGTGCCAGACTCAGGAGGACGGACACACCCACAGGCCAAACAAGGCATTAGGAACCAGGGATGGTG-CAGCTTCCTGGG------------------ATGCCCCAGCTAATGG-----AATCGCACCCAGTCCTGGCTCTGAT-TGCAGTAG------TGACACGTGCCCTCAATCCCTCCCTACCTCGTGACCCATAAGCAGCCTGTTGGCACGGGCACACAGCCATTAGCCAAG-CAACCTGTGAGAAAAACACT-----GCCTGGCCATGCAAAACA---AATGTAGGTGGCCCATCAGAAAGTGAGGACTTGTTTGTGAAAAGGTACATGCATGGAATGCAACAGCCTCCTCCCTCTGCATCTGACTTGGGAGCACTTTCATCATAAAATTTTGGTTGATACTAGATGTATTCTTACTTGTAAGAGAGCACAGTTATCAGGAagagttacagaatgtcaacaacagaaggga----ccc-caaaaataaagtactccagtgc-cc-catttgacagatggggaaactgaggcc------------------------tctgtgttcccagagcc----ccagcctgc--------tccccttgga-cactgcacctgtgcactgtattgccgctgactgttt-ataagccacctcgcacaccagacagtgagttcctggaggccagggtggtacc---ttcatc---tctgctgccctagcttccctcacagggccagggagccaggaggcacccaataaaggattgctgaatTTCAAAACAATACG-TGTACATGATAAATATATACAGTATTTGT---------------------CCATTTTAAAGGGTA--------------------------------------------ATCGAGTTTTTA--------------------AAATGAAAAT---AAAGGATTGCTGAATAAATGAACAA-CCAGAGAGGCGGCCACGCAGCCAAGGACAAACAAAGCTGAATCTGGAACACTGGCTTCCTGCTCTCCTCTCAGACTAAACGCAGTGGGTACTGGGTCACTGGGAGAA------------------TGGCAAGGCC---AGTAT-gctgtatgt-gcagggacagggcaccctcaggctgggagccaagcctggtcccagccctgcctctggcattggcattgacatgctagccatttgaccaccacagcagcccc---------tctctgaagctcagtttct i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73907520 1341 - 130959383 AAATGCAGCCCCTCAGCACTTCATCTCAAACACT-------TTCTCCCA--------GGGCAGGTGGCTGAGGGCtggtgtgctgaaaagctcacgttctgc-----------a-cgcgagaacactgactccggagccatc-------cagctctgc-gcttgctggctgtataaccttgaatgagtcccttagcACGAGGCCCAGAAAGGGGGAACCCTAA-GGGATCTGGCTGTCCCCAG-----CCCTGCCCCTC--TCTCAGACTCAACCCTGCCTCTTTCTGCAGGTTGGCTCGGAGACA------------------------CCTGCCCTCATCATCTGCATTTATGGTCCCCACAAGTCCCAGACTCGGGAGGACGGACACACCTACAGGCCAAACAAGGCATTAGGAACCAGGGATGGCA-CAGCTTCCTGGG------------------ATACCCCAGCTAATGG-----AATCGCAGCCAGTCCTGGCTCTGAT-TGAAGTAGCACATCTGACACGTGCCCTCAATCCCTCCCTACCTCGTGAGCCATAAGCAGCCCGCTGGCATGGGCACACGGCCATTAGCCAAG-CAACCTGTGAGAAAAACACT-----GCCTGGCCGTGCAAAACA---AATGTAGGTGGCCCATGGGAAAGTGAGGACTTGTTTGTGAAAAGGGAAATGTATGGAATGCAACAGGCTCCTCCCTCTGCATCTGACTTGGGAGCACTTTCATCATAAAATTTTGGCTGACACTAGATGTGTTCTTACTTGTAAGAGAGCACTGTTATCAGGCagagtcacagaatgt---caacagaaggga----ccc-caaagataaagtagtccagtgc-cc-catttgacagacggggaaactgaggcc------------------------tctgtgttcccagagcc----ccagcctgc--------tccccttgga-cactgcacctgtacac-acattgccactgactgttt-acaagccacctcgcacaccagacggtgagttcctggaggccacggtggtacc---ttcatc---tctgctgacctagcctgtctcacagggccaggcagccaggaggcacccaataaaggattgctgaatTTCAAAACAATACA-TGCACGTGATAAATATATACAGTATTTGT---------------------CCATTTTAAAGGATA--------------------------------------------ATCAAGTTTTTA--------------------AAATGAAAAT---AAAGGATTGCTAAATAAATGAACAA-CCAGAGAGGCGGCCACGCAGCCAAGGACAAACAAAACTGAATCTGGAACACTGGCTTCCTGCTGTCCTCTTAGACTAAATGCAGTAGGTACTGAGTCACTGGGAGAA------------------TGGCAAGGCC---AGCAT-gctgtgtgc-gcagggacagggcacccccaggctgggggccaagcctggtcccagccctgcctctggcactggcgttggcgtgctaaccatgtgaccaccagagcagcccc---------tctctgaaactcagtttcc i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75467774 1341 - 133195287 AAATGCAGCCCCTCAGCACTTCATCTCAAACACT-------TTCTCCCA--------GGGCAGGTGGCTGAGGGCtggtgtgctgaaaagctcacgttctgc-----------a-cgcgagaacactgactccggagccatc-------cagctctgc-gcttgctggctgtataaccttgaatgagtcccttagcACGAGGCCCAGAAAGGGGGAACCCTAA-GGGATCTGGCTGTCCCCAG-----CCCTGCCCCTC--TCTCAGACTCAACCCTGCCTCTTTCTGCAGGTTGGCTCGGAGACA------------------------CCTGCCCTCATCATCTGCATTTATGGTCCCCACAAGTCCCAGACTCGGGAGGAAGGACACACCTACAGGCCAAACAAGGCATTAGGAACCAGGGATGGCA-CAGCTTCCTGGG------------------ATACCCCAGCTAATGG-----AATCGCAGCCAGTCCTGGCTCTGAT-TGTAGTAGCACATCTGACACGTGCCCTCAATCCCTCCCTACCTCGTGAGCCATAAGCAGCCCGCTGGCATGGGCACACGGCCATTAGCCAAG-CAACCTGTGAGAAAAACACT-----GCCTGGCCGTGCAAAACA---AATGTAGGTGGCCCATGGGAAAGTGAGGACTTGTTTGTGAAAAGGGAAATGTATGGAATGAAACAGGCTCCTCCCTCTGCATCTGACTTGGGAGCACTTTCATCATAAAATTTTGGCTGACACTAGATGTGTTCTTACTTGTAAGAGAGCACTGTTATCAGGCagagtcacagaatgt---caacagaaggga----ccc-caaagataaagtagtccagtgc-cc-catttgacagacggggaaactgaggcc------------------------tctgtgttcccagagcc----ccagcctgc--------tccccttgga-cactgcacctgtacac-acattgccactgactgttt-acaagccacctcgcacaccagacggtgagttcctggaggccacggtggtacc---ttcatc---tctgctgacctagcctgtctcacagggccaggcagccaggaggcacccaataaaggattgctgaatTTCAAAACAATACA-TGCACGTGATAAATATATACAGTATTTGT---------------------CCATTTTAAAGGATA--------------------------------------------ATCAAGTTTTTA--------------------AAATGAAAAT---AAAGGATTGCTAAATAAATGAACAA-CCAGAGAGGCGGCCACGCAGCCAAGGACAAACAAAACTGAATCTGGAACACTGGCTTCCTGCTGTCCTCTTAGACTAAATGCAGTAGATACTGAGTCACTGGGAGAA------------------TGGCAAGGCC---AGCAT-gctgtgtgc-gcagggacagggcacccccaggctgggggccaagcctggtcccagccctgcctctggcactggcgttggcgtgctaaccatgtgaccaccagagcagcccc---------tttctgaaactcagtttcc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73331477 1341 - 125196307 AAATGCAGCCCCTCAGCACTTCATCTCAAACACT-------TTCTCCCA--------GGGCAGGTGGCTGAGGGCTGGTGTGCTGAAAAGCTCACGTTCTGC-----------A-CGTGAGAACACTGACTCTGGAGCCATG-------CAGCTCTGC-GCTTGCTGGCTGTATAACCTTGAATGAGTCCCCTAGCATGAGGCCCAGAAAGGGGGAACCCTAA-GGGATCTGgctgtccccag-----ccctgcccctc--tctCAGACTCAACCCTGCCTCTTTCTGCAGGTTGGCTCGGAGACA------------------------CCTGCCCTCATCATCTGCATTTATGGTCCCCACAAGTCCCAGACTCGGGAGGACGGACACACCTACAGGCCAAACAAGGCATTAGGAACCAGGGATGGCA-CAGCTTCCTGGG------------------ATACCCCAGCTAATGG-----AATCGCAGCCAGTCCTGGCTCTGAT-TGCAGTAGCACATCTGACACGTGCCCTCAATCCCTCCCTACCTCGTGAGCCATAAGCAGCCCGCTGGCATGGGCACACGGCCATTAGCCAAG-CAACCTGTGAGAAAAACACT-----GCCTGGCCGTGCAAAACA---AATGTAGGTGGCCCATCGGAAAGTGAGGACTTgtttgtgaaaagggaaatgtataGAATGCAACAGGCTCCTCCCTCTGCATCTGACTTGGGAGCACTTTCATCATAAAATTTTGGCTGACACTAGATGTGTTCTTACTTGTAAGAGAGCCCTGTTATCAGGCAGAGTCACAGAATGT---CAACAGAAGGGA----CCC-CAAAGATAAAGTAGTCCAGtgc-cc-catttgacagatggggaaactgaggcc------------------------tctgTGTTCCCAGAGCC----CCAGCCTGC--------TCCCCTTGGA-CACTGCACCTGTACAC-ACATTGCCACTGACTGTTT-ACAAGCCACCTCGCACACCAGACGGTGAGTTCCTGGAGGCCACGGTGGTACC---TTCATC---TCTGCTGACCTAGCCTGTCTCACAGGGCCAGGCAGCCAGGAGGCACCCAATAAAGGATTGCTGAATTTCAAAACAATACA-TGCACgtgataaatatatacagtatttgt---------------------ccattttaaaggata--------------------------------------------atcaagttttta--------------------aaatgaaaat---aaaggatgGCTAAATAAATGAACAA-CCAGAGAGGCGGCCACGCAGCCAAGGACAAACAAAACTGAATCTGGAACACCGGCTTCCTGCTGTCCTCTTAGACTAAATGCAGTAGGTACTGAGTCACTGGGAGAA------------------TGGCAAGGCC---AGCAT-GCTGTGTGC-ACAGGGACAGGGCACCCCCAGGCTGGGGGCCAAGCCTggtcccagccctgcctctggcACTGGCGTTGGTGTGCTAACCATGTGACCACCAGAGCAGCCcc---------tctctgaaactcagtttcc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72164110 1340 - 125710982 AAATGCAGCCCCTCAGCACTTCATCTCAAACACT-------TTCTCCCA--------GGGCAGGTGGCTGAGGGCtggtgtgctgaaaagctcacattctgc-----------a-cgcgggaacactgactccggagccatc-------cggctctgctgcttgctggctgtataaccttgaatgagtcccctagcATGAGGCCCACAAAGGGGGAACCCTCA-GGGATCTAGCTGTCCCCAG-----CCCTGCCCCTC--TCTCAGACTCAACCCTGCCTCTTTCTGCAGGTTGCCTCGGAGACA------------------------CCTGCCCTCATCATCTGCATTTATGGTCCCCACAAGTCCCAGACTCGGGAGGACGGACACACCTACAGACCAAACGAGGCATTAGGAACCAGGGATGGCA-CAGTTTCCTGGG------------------ATACCCCAGCTAATGG-----AATCGCAACCAGTCCTGGCTCTGAT-TGCAGTAGCACATCTGACACGTGCCCTCAATCCCTCCCTACCTCGTGAGCCATAAGCAGTCCGCTGGCATGGGCATACAGCCATTAGCCAAG-CAACCTGTGAGAAAAACACT-----GCCTGGCCGTGCAAAACA---AATGTAGGTGGCCCATCGGAAAGTGAGGACTTGTTTGTGAAAAGGGAAACGTATGGAATGCAACAGGCTCCTCCCTCTGCATCTGACTTGGGAGCACTTTCATCATAAAATTTTGGCTGACACTAGATGTGTTCTTACTTGTAAGAGAGCACTGTTATCAGGCagagtcacagaatgt---caacagaaggga----ccc-caaagataaagtagtccagtgc-cc-catttgacagatggggaaactgaggcc------------------------tctgtgttcccagagcc----ccagcctgc--------tccccttgga-cactgcacctgtacac-acattgccactgactgttt-acaagccacctcgcacaccagacggtgagttcctggaggccacggtggtacc---ttcatc---tctgctgccctagcctgtctcacagggccagacaaccaggaggcacccaataaaggattgctgaatTTCAAAACAATAAG-TGCACATGATAAATATATACAGTATTTGT---------------------CCATTTTAAAGGGTA--------------------------------------------ATCAAGTTTTTA--------------------AAATGAAAAT---GAAGGATTGCTGAATAAATGAACAA-CCAGAGAGGCAGCCATGCAGCCAAGGACAAACAAAACTGAATCTGGAACACTGGCTTCCTGCTGTCCTCTCAGACTAAACGTAGTAGGTACTGGGTCACTGGGAGAA------------------TGGCAAGGCC---AGCAT-gctgtgtgc-gcagggacagggcacccccaggctgggggccaagcctggtcccagccctgtctctggcactggcgttggcgtgctaaccatgtgaccaccaaagcagcccc-----------tccgaaactctgtttcc i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75623280 1402 - 121768101 AAATGCAGTCCCTCAGCACTTCATCTCAAACACT-------TTCTCCCA--------GGGCAGGTAGCTGagtgctggtgtgataaaaagctcacattctac-----------a-cacaggaacactgactctggagccatc-------tggctctgctgcttgctggctgtataaccttgaccgagccccctagcACAAGGCCC-CAAAGAGGTAACCCTCAGGGGATCTGGCTGTCCCCAA-----CCCTGTCCCTC--TCTCAGACTTGACCCTGCCTCTTTCTGCAGGTTGGCTTACAGATGCAGGTCCCCAGG-GACCACAGCACCCTGCCCTCATCGTCTGCATTTATGGTGCCCACAAGTCCCAGACTCAGGAGGACGGACACACGCACAGGCCAAACAAGGCATTAGGAACCAGGGATGGCA-CAGCTTCCTGCGATGCCCCAGCTCCCCAGGATGCCCGAGCTAATGGGAGCTAATCGCACCCAGTCCTGGCTCTGAT-CACAGCAGCACATCTGACACGTGCCCTCAATCCCTCCCTACCTCGTGACCCCTAAGCAGCCCGCTGGCACGGGCACACAGCCATTAGCCAAG-CAACCTGTGAGAAAAACACTGCCTGGCCTGGCCATGCAAAACA---AATGCAGGTGGCCCATCAGAAAGTGAGGCCTTGTTTGTGAAAAGGTAAATGTATGGAATGCAACAGGCTCCTCCCTCTGCATCTGACTTGGGAGCATTTTCATCACAAAATTTTAGTTGACAATAGACGTGTTCTTACTTGTAAGAGAGCACTATTATCAGGAaaagtcacagaatgtgaatgacagaaggga----cccgcaaagacaaagtagtccaatgc-cc-catttgagagttggagaaagtgaggcc------------------------tctgtgttcctagagcc----tcagcctgc--------tccccttgga-cactgcacctgtgcactgtattgccactgactgttt-acaagccgccttgcacactggacactgagttcctggaggccagggcggtacc---ttcatc---tctgcagccctagcctctctcacagggccaggcagccaggaggcacccaagaaaggattgctgaatTTCAAAATTATATGTTGTACATGACAAATATATATAGTATTTGC---------------------CCGTTTTAAAGGTTA--------------------------------------------ATCAAGTTTTTA--------------------AAATGAAAAT---AAAGGACTGCTGAATAAATGAACAACCCAGAGAGGCAGCCACGCAGCCAAGGGCAAACAAAGCTGAATCTGGAACGCTGGCTTCCTGCTGTCCTCTCAGACTAAACGCAGTAGGTACTGGGTCACT-GGAGAA------------------TGGCAAGGCC---AGTAT-GCTGTGTGT-ACAGGGACAGGACACCCCCAGGCTAGAGGCCAAGCCTGGTCCCAGCCCTCCCTCTGGCA------TTGGCGTGTTGGCCATGTGACCACCAGAGCAGCCCCTCTCGGAAGTCTCTGAAGCTCAGttttt i calJac3.chr12 C 0 I 894 s mm10.chr14 24216781 1335 + 124902244 AGACTCAGCAGCCCAGCACTCCATCTGAAACATTGCAAGAGTTCTCCGACAGGGCTGCAGCAGATGG--GGGAGCAGGTATACAG-ACAGTTCACCCCACAC-----------AGCACTAGTGCACAGGCACAGGGCCTAGGAACACGACAGCTCTACCAACTGCTGACAATATGATGAGGACCAAGTCTCCCAGCACAG---CCAGGAAGTAG--ATCCTGA-GAAACAGAACC-------------CTCTGCACCCC--TCT---------------ATCTCCCTTCAGGTTAGCCCCCCATTACGGACCCAAAAGTGTCCAGCTCGCCCTGCCCTCCCTGTCTTTCTTTGTGGTGCCC-CAGGTCCTACACAC----------ATGCATTCATAGGCCA------GCTCTCAGGGGCAGGCACGGCAGCAGCTGCAGGGG-------------------TGCTCCAGCTAATAA-----AACAATATGTACTCCTGCTT-----------------GGCTTACAAGTAC-----------------------------AAGTAACAAGCTGGCATGGG-GCCCAGGCAGAAGTCGAG-GTGCACGGAGCAAAGACACA-----ACCTAGACAAGCAAAGCAAGCAATGTAGCGGACCCACCAGAGCACAGGAGCCTGCTTA-GGGCAGGTCAATGTTTAGAGCACTCCCGGCTCTTCCTTCT---CCTGAATGGGAAGTACCTTCAACAGAAAACTTTA-----------------TCTAACCTCCAAGAGAACACTGTCACCAG--AGAGTCTCAGAATGTTA-AGACAGAAGAGAAGGTCTC-CAAAGACCAAACAATGCAGTGT-ATGTATCTGACAGATAAGAATA--GAGATC------------------------CCAG------CAGGGCCGGATGCTGCCTGCTTCTGGCGTCCTTTTGAATTGCTACACCTGTGCCCCGTATTGCCTCTGACTGCTTAACCAGGCA-CTGTCACGCCAA----TGAGTTCCTAAACATCAGGGCAGTTCCCTATTTAGC---GTTACAGCTCCAGCATCCCTTGCGGGGCCCCG-AGTCTGCAGATACCCAATACAAGGTTGCTGCGGTTCAAAAACTAACA-TGTTGTGTACAATTCTATACATGATTTCTTATCTGCCAGTGTCTTACAAATTACTGAAAAAGGTAAgggctgggagtatagctctacagtacaacgcgtacttagcaagagtaagattctgggctctctccctagcaccacaaaTATAAATTCAAGTAGAGTGCTATGTGAATGGGTGATCCAGACAGCTGGCCAG--TGACACGGGGACCCCAAGCTTGGTCTGGAGCCATGGCTTTCTCCT----CCTCAGTCTAAGCACAGTGGGTACTGAACAAGTGGGTAAA-------------------GAAAAGACCTTGAGAATGGTTGTGTG----------------------GCTCAGGGACCAACCCTGGCTCCCATCCTGCCTCTGACA------CTAAGATGCTGACCATATAGCCACCTGGGA---------------TC----AACCTCAGTGTCT i mm10.chr14 I 276 C 0 s canFam3.chr4 27779061 1217 + 88276631 AGATGTAGCATCTCGGTGCTTTGTCTTAATCAGA-------------CA-------------------------CTGGTTTGCTGAAAAGCTCACTCTCTGAGGAGCTTCAgga-ggcaggaacacagactcaagaggcatc-------tggctccaccacttgctgactgtataaccttggccaagCTTCCAAGGATGAGGCCCAGAAAGAGGAAGCCCTAG-GGAGACAGG--GTCCCTGGAACCTCCCGGTCCTTCAAACCTGGTCCCAGCCCTGCCCCCTGCTGCGGCCTGGTTCAGGGACTCAA----------GGTCACAGTGAGCACCTCTCACAG---------------CCCACGAGCCCCAGAT-------------------------------AAGGCCTTAGGAACCAGGGATGGGA-CA-------------------------------CCCCAGCCAATGG-----AATCACATCCGGTCCTGGCTCAGATCCACAATAGCACATCTGACACGTGCCCTCAATCCCTCTCTACCCGGTGACCCATAAGCAGCCTGCTGGCACCAACACACAGCCATAAGCCAAACCAACTTGTGTGAAAAACATT-----TCCTGGCCATACAAAACA---AATGTATTTGGCCCATCAGGGAATGAGTAATTGTTTGTGAAAAGAGA----TATAGAACCCAAGAGACTCCTCTCT----ATCTGACTTGGGAGCACCTTAAACATAAAATTCTGGTTGACGCTAGGTGGGTCTTCACCTCCAGGATGACACTCCTTtcatgaagagtcacagaatgtaaaagacagaaggga----tgc-caaatatcaagtagtccaatgcacc-catttgacagatggggaaactgaggctccagcagagTCAGGATTGCCTATGTCTGCACTCCCAGAGCC----CCACCCTGC--------TCTGCAGGGA-CACTGCAcctgcccactgtatcagcgcggactcttt-acgagctgccgcccacacaagac--cgagttctctgtgaccagggtgttacc---tttctcgtgtctgctgctccggcatctcccacaggaccaggcaa-------gcatc----------------------------------tgtgctcaataaaca--------atccgt-------------------------------ggaca-----------------------------------------------------------------------------------aat---aaaCGACCCACAGATGTATT------CCAGA------GCCACAGAGC--GGGGCAAACAAAGCTGAATCTGGAGCCCTGGCTTCATGCTCTCTATTCCGACTGAATGCAG----CACTGGGCAACTGGGTGAAGGAACACGAACCATCGAGTGACAAGAGC---AGTGT-GCTGAGTGCGGCAGGGTTAGG----CACCGGTCTGGAGGCCACACCTGCTTCCAGCCCTGCCTCTGACC------CGGGTGTGCGGGTCACGTGACCACACAAACAGCCCA----------CTCTGAA----------- i canFam3.chr4 C 0 C 0 a score=120399.000000 s hg38.chr10_KI270825v1_alt 131806 120 + 188315 tccattcttgattgcaggacaaataaacgtcaccttacctaccc--accagtgtctcagcaaggaaggagagagagaaGGAAACGTCACCTTACCTACCCACCAGTGTCTCAGCAAGGAAGG s panTro4.chr10 76509355 66 + 133524379 tccattcttgattgcaggacaaat--------------------------------------------------------aaacgtcaccttacctaccgaccagtgtctcagcaaggaagg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76178706 66 - 133410057 tccattcttgattgcaggacaaataaacgtcaccttgcctaccc--accag------------------------------------------------------tgtctcagcaaggaatg i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35113637 62 + 104879549 tccattcttgattgcaggataaataaacctcaccttgcct------------------------------------------------------------accagtgtctcagcaaggaatg i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73908861 66 - 130959383 tccattcttgattgcaggataaataaacctcaccttgcctaccc--------------------------------------------------------gccagtgtctcagcaaggaagg i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75469115 66 - 133195287 tccattcttgattgcaggataaataaacctcaccttgcctaccc--------------------------------------------------------gccagtgtctcagcaaggaagg i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73332818 66 - 125196307 tcCATTCTTGATTGCAGGATAAATAAACCTCACCTTGCCTACCC--------------------------------------------------------GCCAGTGTCTCagcaaggaagg i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72165450 66 - 125710982 tccattcttgattgcaggataaataaacctcaccttgcctaccc--------------------------------------------------------gccagtgtctcagcaaggaagg i chlSab2.chr9 C 0 C 0 s mm10.chr14 24218116 97 + 124902244 TGTATTCTTCATCAAAAGATACATGTGCCCCTTCTTGCCCTCAAGGATCAGGGCCAGAAAGGAGAAAGAAGGAAAC------------------------ACAAATGT-TCAGTGAGGAaca i mm10.chr14 C 0 I 73 s canFam3.chr4 27780278 61 + 88276631 ------------TGGAGGATGAACAAATCTCACCTTGCCTGCCT--GCCTGCC-----------------------------------------------TCCAGTACCAGAGCAAGGCGAG i canFam3.chr4 C 0 C 0 e calJac3.chr12 75624682 894 - 121768101 I a score=210827.000000 s hg38.chr10_KI270825v1_alt 131926 109 + 188315 AGAGAGAGAAGG-AGGTGAAAGTGCACTGAAGACCTAATACACAATGTATACTTAAGCGGGACTGTCAGGGGACAAAGGTATTCACTGGGGA-CCCCCTGCCCCCACCCAG s panTro4.chr10 76509421 110 + 133524379 agtgagagaagg-aggtgaaagtgcactgaagacctaatacacaatgcatacttaagcggGACTGTCAGGGGACAAAGGTATTCACTGGGGACCCCCCCGCCCCCACCCAG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76178772 100 - 133410057 agagagagaagg-aggtgaaagtgcactgaagacctaatacacaatgcatacttaagCAGGACTGTCAGGGCACAAAGGTATTCACTGGGGA-CCCC---------CCCAG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35113699 102 + 104879549 agagacagaagg-aggtgaaagtgcactgaagacctaatacacaatgcatacttaagcggGACTGTCAGGGGACAAAGGTATTCACTGGGGA-CTCCCC-------CCCAG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73908927 99 - 130959383 agagagaggaag-aggtgaaagtgcactgaagacctaacacacaatgcatacttaagcggGACTGTCAGGGGACAAAGGTATTCACTGGGGA-ACC----------GGAAG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75469181 99 - 133195287 agagagaggaag-aggtgaaagtgcactgaagacctaacacacaatgcatacttaagcggGACTGTCAGGGGACAAAGGTATTCACTGGGGA-ACC----------GGAAG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73332884 99 - 125196307 agagagaggaag-aggtgaAAGTGCACTGAAGACCTAACACACAATGCATACTTAAGCGGGACTGTCAGGGGACAAAGGTATTCACTGGGGA-ACC----------CGAAG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72165516 99 - 125710982 agagagaggaag-aggtgaaagtgcactaaagacctaacacacaatgcatacttaagcggGACTGTCAGGGGACAAAGGTATTCACTGGGGA-ACC----------CGAAG i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27780339 61 + 88276631 ------AGAAGGAAAGTGCACGCACACTGAGGACAAGGCACCC-------------------CCCCCGTGGGGCTGAGCTCCCCAA------------------------- i canFam3.chr4 C 0 C 0 e mm10.chr14 24218213 73 + 124902244 I e calJac3.chr12 75624682 894 - 121768101 I a score=215672.000000 s hg38.chr10_KI270825v1_alt 132035 80 + 188315 TAATGCTGCCACATTttccttatccaccagcccatttactcctccataaccctgttaggtaatgagaa---------------cagacatc-tcag s panTro4.chr10 76509531 80 + 133524379 TAATGCTGCCACATTttccttatccaccagcccatttactcctccataaccctgttaggtaatgagaa---------------cagacatc-tcag i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76178872 80 - 133410057 TAATGCCACCACATTttccttatccaccagcccatttattcctccataaccctgttaggtaatgagaa---------------cagacatc-tcag i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35113801 80 + 104879549 TAATGCCGCCACATTttccttatccaccagcccatttattcctccataaccctgttaggccatgagaa---------------cagacatc-tcag i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73909026 80 - 130959383 TAATGCCACTGCATTttccttatccactagcccatttattcctccataaccctgttagttaatgagaa---------------cagacatc-tcag i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75469280 80 - 133195287 TAATGCCACTGCATTttccttatccactagcccatttattcctccataaccctgttagttaatgagaa---------------cagacatc-tcag i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73332983 80 - 125196307 TAATGCCGCTGCATTTTCCTTATCCACTAGCCCATTTATTCCTCCATAACCCTGTTAGTTAATGAGAA---------------CAGACATC-TCAG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72165615 80 - 125710982 TAATGCCGCTGCATTTTCCTTACCcactagcccatgtattcctccataaccctgttagttaatgagaa---------------cagacatc-tcag i chlSab2.chr9 C 0 C 0 s mm10.chr14 24218286 73 + 124902244 TAATGCAA-----------------------CCATGTCTTCCTCTCTGATCTTGCTGAGCAGTAAGAATGGACAGACATACACCAGACACCATCAG i mm10.chr14 I 73 C 0 s canFam3.chr4 27780400 77 + 88276631 ---CGATGCTGCATCTCCCTGACGCCCCAGCTCCTTACGCCTCCCATAACCCTGGTAAGCAGCAGGAG---------------CAGAAGCA-TCAG i canFam3.chr4 C 0 C 0 e calJac3.chr12 75624682 894 - 121768101 I a score=1936066.000000 s hg38.chr10_KI270825v1_alt 132115 615 + 188315 ccccactttactgaaga---gaaaacaaggtcgag--------agaggC-CATCGATAGTGTCTGTCCTC----CAGTGGCCCTG--CCAGGCCAAGGGGTTGG------------GGGC----------ACGGCAAAGGGCTCCAGGAGTCCCTGCCCGCCCCAGACAG-CAGCACCTGCCAATCTTGTGTATCAATGGGCAGCAGTGCTGGGCTGTGACTTGCCAAGTCCATAGTCAG-TCCCTGAATGCCATAGGGAAGCATCTGCTCTGGACGGTCCCGTGCTTGGGGGCAGAATGA-CATAAGTCCAAAGTAGTTCAAACGGACCAGCAAAAAGTAACCAAAACATAGCCAACGGCCTGTGGACTAGAAGTCAGTGCAGACACCATTACCTGGTTTTCTAATTCTCCCTGGAGGAAACTGGATCAATGGGGGATGGGGGAAGGGACAGCAGTTTTTGACCC--CCTACTCCCTGGGCCTGAACCCTTCCCAGAGCTGAGTCCTCTTCTCCACTCCCTACTGTCTCCCTACCCGGCG-CGTGGCCCGCATGGGGCCTTCCCACAGGT------------GGACTGATTTTTCTGTCCCTCAG--AACCAGAGCCAGTGGACAAAACCTCCGTTCCCAAACTC---C--------------------AAGC---CACCAATGGAAG-----------------------------------------GCCTCACATAGG s panTro4.chr10 76509611 615 + 133524379 ccccactttactgaaga---gaaaacaaggtcgag--------agaggC-CATCGATAGTGTCTGTCCTC----CAGTGGCCCTG--CCAGGCCAAGGGGTTGG------------GGGC----------ACGGCAAAGGGCTCCAGGAGTCCCTGCCCGCCCCAGACAG-CAGCACCTGCCAATCTTGTGTCTCAATGGGCAGCAGTGCTGGGCTGTGACTTGCCAAGTCCATAGTCAG-TCCCTGAATGCCATAGGGAAGCATCTGCTCTGGACGGTCCCGTGCTTGGGGGCAGAATGA-CATAAGTCCAAAGTAGTTCAAACAGACCAGCAAAAAGTAACCAAAACATAGCCAACAGCCTGTGGACTAGAAGTCAGTGCAGACACCATTACCTGGTTTTCTAATTCTCCCTGGAGGAAACTGGATCAATGGGGGATGGGGGAAGGGACAGCAGTTTTTGACCC--CCTACTCCCTGGGCCTGAACCCTTCCCAGAGCTGAGTCCTCTTCTCCACTCCCTACTGTCTCCCTACCCGGCG-CGTGGCCGGCATGGGGCCTTCCCACTGGT------------GGACTGATTTTTCTGTCCCTCAG--AACCAGAGCCAGTGGACAAAACCTCCGTTCCCAAACTC---C--------------------AAGC---CACCAATGGAAG-----------------------------------------GCCTCACATAGG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76178952 613 - 133410057 ccccactttactgaaga---gaaaacaaggtcgag--------agaggC-CATCGATAGTGTCTGTCCTC----CAGTGGCCCTG--CCAGGCCAAGGGGTTGG------------GGGC----------ACGGCAAAGGGCTCCAGGAGTCCCTGCCCGCCCCAGA----CAGCACCTGCCAATCTTGTGTCTC-ATGGGCAGCAGTGCTGGGCTGTGACTTGCCAAGTCCACAGTCAG-CCCCTGAATGCCATAGGGAAGCATCTGCTCTGGACGGTCCCGTGCTTGGGGGCAGAATGA-CATAAGTCCAAAGTAGTTCAAATGGACCAGCAAAAAGTAACCAAAACATAGCCAACAGCCTGTGGACTAGAAGTCATTGCAGACACCATTACCTAGTTTTCTAATTCTCCCTGGAGGAAACTGGATCAATGGGGGATGGGGGAAGGGACAGCAGTTTTTGACCC--CCTACTCCCTGGGCCTGAACCCTTCCCAGAGCTGAGTCCTCTTCTCCACTCCCTACTGTCTCCCTACTCCGCG-CGTGGCCCGCGTGGGGCCTTCCCACAGGT------------GGGCTGATTTTTCTGTCCCTCAGGCAACCAGAGCCAGTGGACAAAACCTCTGTTCCCAAACTC---C--------------------AAGC---CACCAATGGAAG-----------------------------------------GCCTCACATAGG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35113881 617 + 104879549 ccccactttactgaaga---gaaaacaaggtcgag--------agaggC-CATCGATAGTGTCTGTCCTC----CAGTGGCCCTG--CTAGACCAAGGGGTTGG------------AGGC----------ACGGCAAAGGGCTCCAGGAGTCCCTGCCCGCCCCAGACAG-CAGCACCTGCCAATCTTGTGTCTCAGTGGGCAGCAGTGCTGGGCTGTGACTTGCCAAGTCCACAGTCAG-TCCCTGAATGCCATAGGGAAGCATCTGCTGTGGACGGTCCCGTGCTTGGGGGCAGAACGA-CATAAGTCCAAAGTAGTTCAAATGGACCAGCAAAAAGTAACCAAAACATAGCCAACAGCCTGTGGACTAAAAGTCATTGCAGACACCATTATCTGGTTTTCTAATTCTCCCTGGAGGAAACTGGATCAACGGGGGATGGGGGAAGGGATGGCAGTTTTTGACCC--TGTACTCCCTGGGCCTGAACCCTTCCCAGAGCTGAGTCCTCTTCTCCACTCCCTACTGTCTCCCTACCCCGCA-CATGGCCCGCGTGGGGCCCTCCCACAGGT------------GGGCTGATTTTTCTGTCCCTCAGGCAACCAGAGCCAGTGGACAAAACCTCTGTTCCCAAACTC---C--------------------AAGT---CACCAATGGAAG-----------------------------------------GCCTCACATAGG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73909106 612 - 130959383 tcccactttcttgaaga---gaaaacaaggtcgaa--------ggaggC-CATTGGCAGTGTCTGTCCTC----CAGTGGCCCTG--CCAGGCCAAGGGGCTGG------------GGGC----------ATGGCAAAGGGCTCCAGGAGTCCCTGCCCCCAACAGATAG-----ACTCGCCAATCTTGTGTCTCAATGGGCAGCAGTGCTAGGCTGTGACTTGCCAAGTCCGCAGTCAG-TCCCTGAATGCCACAGGGAAGCATCTGCTGTGGACTGTCCCGTGCTTGGGGGCAGAATGA-CAGAAGCCCAAAGTAGTTCAAATGGACCAGCAAAAAGTAACCAAAACATAGCC-ACAGCCTGCGGACTAGAAGTCATTGCAGACACCATTACCTGGTTTTCTAATTCTCCCTGGAGGAAACTGCATCAATGGGGGATGGGGGAAGGGACAGCAGTTTTTGACCC--CCTACTCCCTGTACCTGAACCCTTCCCAGAGCTGAGTCCTCTTCTCCACTCCCTACTGTCTCCCTGCCCTGCG-TGCAGCCCGTGTGGGGCTGTCCCACCGAT------------GGGCTGATCTTTCTGTCCCTCAGGCAACCAGAGCCAGTGGACAAAACCTCCATTCCCAAACTC---T--------------------AAGC---CACCAATGGAAG-----------------------------------------GCCTCATGTAGG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75469360 612 - 133195287 tcccactttcttgaaga---gaaaacaaggtcgaa--------ggaggC-CATTGGCAGTGTCTGTCCTC----CAGTGGCCCTG--CCAGGCCAAGGGGCTGG------------GGGC----------ATGGCAAAGGGCTCCAGGAGTCCCTGCCCCCCACAGATAG-----ACTCGCCAATCTTGTGTCTCAATGGGCAGCAGTGCTAGGCTGTGACTTGCCAAGTCCGCAGTCAG-TCCCTGAATGCCACAGGGAAGCATCTGCTGTGGACTGTCCCGTGCTTGGGGGCAGAATGA-CAGAAGCCCAAAGTAGTTCAAATGGACCAGCAAAAAGTAACCAAAACATAGCC-ACAGCCTGCGGACTAGAAGTCATTGCAGACACCATTACCTGGTTTTCTAATTCTCCCTGGAGGAAACTGCATCAATGGGGGATGGGGGAAGGGACAGCAGTTTTTGACCC--CCTACTCCCTGTACCTGAACCCTTCCCAGAGCTGAGTCCTCTTCTCCACTCCCTACTGTCTCCCTGCCCTGCG-TGCAGCCCGTGTGGGGCTGTCCCACCGAT------------GGGCTGATCTTTCTGTCCCTCAGGCAACCAGAGCCAGTGGACAAAACCTCCATTCCCAAACTC---T--------------------AAGC---CACCAATGGAAG-----------------------------------------GCCTCATGTAGG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73333063 612 - 125196307 TCCCACTTTCCTGAAGA---GAAAACAAGGTCGAA--------GGAGGC-CATTGGCAGTGTCTGTCCTC----CAGTGGCCCTG--CCAGGCCAAGGGGCTGG------------GGGC----------ATGGCAAAGGGCTCCAGGAGTCCCTGCCCCCCACAGATAG-----ACTCGCCAATCTTGTGTCTCAATGGGCAGCAGTGCTGGGCTGTGACTTGCCAAGTCCGCAGTCAG-TCCCTGAATGCCACAGGGAAGCATCTGCTGTGGACTGTCCCGTGCTTGGGGGCAGAATGA-CAGAAGCCCAAAGTAGTTCAAATGGACCAGCAAAAAGTAACCAAAACATAGCC-ACAGCCTGCGGACTAGAAGTCATTGCAGACACCATTACCTGGTTTTCTAATTCTCCCTGGAGGAAACTGCATCaatgggggatgggggaagggacaGCAGTTTTTGACCC--CCTACTCCCTGTACCTGAACCCTTCCCAGAGCTGAGTCCTCTTCTCCACTCCCTACTGTCTCCCTGCCCTGCG-TGCAGCCCGTGTGGGGCCGTCCCACCGAT------------GGGCTGATCTTTCTGTCCCTCAGGCAACCAGAGCCAGTGGACAAAACCTCCGTTCCCAAACTC---T--------------------AAGC---CACCAATGGAAG-----------------------------------------GCCTCATGTAGG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72165695 615 - 125710982 tcccactttcctgaaga---gaaagcaaggtccaa--------ggaggC-CATTGGCAGTGTCTGTCCTC----CAGTGGCCCTG--CCAGGCCAAGGGGCTGG------------GGGC----------ATGGCAAAGGGCTCCAGGAGTCCCTGCCCCCCACAGATAG-----ACTCGCCAATCTCGTGTCTCAATGGGCAGCAGTGCTGGGCTGTGACTTGCCGAGTCCACAGTAAG-TCCCTGAATGCCACAGGGAAGCATCTGCTGTGGGCTGTCCTGTGCTTGGGGGCAGAATGA-CAGAAGCCCAAAGTAGTTCAAATGGACCAGCAAAAAGTAACCAAAACATAGCC-ACAGCCTGCGGACTAGAAGTCATTGCAGATACCATTACCTGGTTTTCTAATTCTCCCTGGAGGAAACTGCATTAATGGGAGATGGGGGAAGGGACAGCAGTTTTTGACCC--CCTACTCCCTGCACCTGAACCCTTCCCAGTGCTGAGTCCTCTTCTCCACCCCCTACTGTCTCCCTGCCCTGCA-TGCAGCCCGTGTGGGGCCGTCCCACCGAT------------GGGCTGATCTTTCTGTCCCTCAGGCAACCAGAGCCAGTGGACAAAACCTCCGTTCCCAAACTCTAAT--------------------AAGC---CACCAATGGAAG-----------------------------------------GCCTCGTGTAGG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75625576 598 - 121768101 CCCCACTTTACT--------GAAAACAAGGTCAAC--------AGAGG--CATCGGCAGTGTCTGTCCTC----CAGTGGCTCTG--C-AGGCCAAGGGGTGGG------------GGGC------------GGCAAAGATCTCCAAGAGT-CCTGCCCCC--CAGACAG-TAACACACACCAATCTTGTGTCTCAATGGGCAGCAATGCTGGGCTGTGACTTGCCAAGTCCACAGTCAG-CCCCTGAATGCCATATGGAAGTATCTACTGTGGACCATTCCACGCCT-GGGGCAGAATAA-CAGAAATCCAAAGTAGTTCAGATGGACCAGCAAAAAGTAACCAAAACACAGCC-ACAGCCTGTCAACTAGAAG----TGCAGACACCATTACCTGGTTTTCTAATTCTGCCTGGAAGAAACTTGAGCAATGGGGGATGGGGGAAGGGACAACAGTTCCTGACCC--CC-ATTCCCTGGGCCTG-ACCCTTCCCAGAGTTGAGTCCTCTTCCCCACTCCCTACTGTCTCCCCACCCTGTGACGTGGCCCCCACGAGGCCTTCCCACAGAT------------GGGCTGGTTTTTCTGTTCCTCAGGCAACCAGAGCCAGTGGACAAAATCTCTGTTCCCAAACCC---C--------------------AGGC---CATCAATGAAAG-----------------------------------------GCCTCATGTAGG i calJac3.chr12 I 894 C 0 s mm10.chr14 24218359 519 + 124902244 CCCCACTTCACTGAGGATGGGAAAACAGACTCCAATAGGCTTCAGAGGTACAGCTATAGTGTCCCCCGCCCACACACTAACTCTTACCCAAAACCTGGGTCTTA------------GG------------------AGGTGCTCCGGCAGGCCCTGTATGCAACCCGTAG-TGGCCACAGCCA------CGTCTGGCTGGACAGTGATGC--------------------CCACAGCCAGTTTCTTGGATGTAACAGACAAGCA-CAACCATAGATTGTTCCCTGCTTAGAGACAAAAGGACCAGGAACTCAGTGCA----------------AAGGAGCACC-----CATAACC-ACTCCCCATGGGCTGGGGCTC---------------ACCCTGCTCCCTACTTCTCTCTGGAGGGATATGAGTAACTGAGACTGCAGTGAGGGGAAAGCCG---------------------------------CTCTCCTGAGCTGAGTCTACCTGTC---------CCACCACCCCTCCCTAAC-AGCAGCCACCTCAGGGCCTTCTCACACAT-----------GGGGGTCACCTTTCTGTCCCTTGGG-AACTAA----AGTGGTTGAAACACCC-TTCCTAAGCAC---C--------------------AAGT---CACTAGCTCCAG-----------------------------------------GCCTT-TACCGG i mm10.chr14 C 0 C 0 s canFam3.chr4 27780477 659 + 88276631 -CCCACTGCACAGCTGG---GAAAATAAGGCAGCA--------AGAGGC-TG------------GGCCTG----CGGCGCCCCTG--G-AAGCCCGGGTGCTGGCTCCTGCTCTAAGGACTGCCCCAGCGGCGGGGAAGGCTTCCAGGAGTACCTGCCCC---CAGGCAAGCAACATCTGCCAATCCCACATCTCACAGGGCAGCGATTCCTGGCTGTGAAGTGCCAAGTCCATGGCCAG-TCCCTGGAT-----------GTACCAGCTGTGGATGGTCCAG-GCCCTGGGGCAGAAGGA-CAGAAGTCTGAGGAAGCTCAGATGGCCAAGTAAAAAATAACCAAAGAAGAGCC-ACACCCTGTGGCCTAGAAATCACCACAGACACCATTACCTGGTTTACCAATTCTCCCAGGAGAAAACATTATTTCTAGCAGATGGGAGGGGG----ACAGCTTTAGATCCCACCTACCCCCTAGGCCTG------------AGCTGGGGAGCCCCCCCCA---------GTCTCCTCTCCTAACA-CG--GCCATCTTGGATCCAGTCTACCAATCAGAATACCAATAGAGTGATTTCTCTATTTCTCAGGCAACTACAGCAAGCAGGCAAAA--TCTGTTTTAAGACta---tttattagagagagagagagagagcacacacaaatggggggggggagcagggggagaagcagacttcccactgagcagggagccctacatggg i canFam3.chr4 C 0 I 109 a score=21573.000000 s hg38.chr10_KI270825v1_alt 132730 7 + 188315 AAGC---------TGT s panTro4.chr10 76510226 7 + 133524379 AAGC---------TGT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76179565 7 - 133410057 AAGC---------TGT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35114498 7 + 104879549 AAGC---------TAT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73909718 7 - 130959383 AAGC---------TGT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75469972 7 - 133195287 AAGC---------TGT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73333675 7 - 125196307 AAGC---------TGT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72166310 7 - 125710982 AAGC---------TGT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75626174 7 - 121768101 AGGC---------TGT i calJac3.chr12 C 0 C 0 s mm10.chr14 24218878 16 + 124902244 AAGCATGAGACAGTGT i mm10.chr14 C 0 C 0 e canFam3.chr4 27781136 109 + 88276631 I a score=1502242.000000 s hg38.chr10_KI270825v1_alt 132737 429 + 188315 GGGTGGAAGATGGTGCG-----------------TTTCT-----ACTGCCTGGTGGTTTTAGATCTCTATCGCCTACTCAGAATCTGAACCCTAGCCTGTGTGTGTGAGAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCACGTGCACATACAAA---------------AACAGCAAGG----TATCTACAA-----GGGG-------------GG----Tcaggattgcagaggggctacctgtgtgagctctggagcccaactgcctgcctgggaatcccagcttacccactgactagctgtgtgactcagggcaagttctttaaccactctgtgcctctgtctgcacctcactctccttgcccctaaaacaggggtaagcaaagtacccacctcccaggatttttgtgaggctaaaatgagataacacctagcaca---cttgccagacaag---aaaagttctatTTTTCCCCAGCACaatgttaatagggttgcctctgggattttgtgtgctttt- s panTro4.chr10 76510233 429 + 133524379 GGGTGGAAGATGGTGCG-----------------TTTCT-----ACTGCCTGGTGGTTTTGGATCTCTATCACCTACTCAGAATCTGAACCCTAGCCTGTGTGTGTGAGAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCATGTGCACATACAAA---------------AACAGCAAGG----TATCTACAA-----GGGG-------------GG----Tcaggattgcagaggggctacctgtgtgagctctggagcccaactgcctgcctgggaatcccagcttacccactgactagctgtgtgactcagggcaagttctttaaccactctgtgcctctgtctgcacctcactctccttgcccctaaaacaggggtaagcaaagtacccacctcccaggatttttgtgaggctaaaatgagataacacctagcaca---cttgccagacaag---aaaagttctatTTTTCCCCAGCACaatgttaatagggttgcctctgggattttgtgtgctttt- i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76179572 429 - 133410057 GGGTGGAAGATGGTGCG-----------------TGTCT-----ACTGCCTGGTGGTTTTGGATCTCTATCGCCTATTCAGAATCTGAACCCTAGCCTGTGTGTGTGAGAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCATGTGCACATACAAA---------------AACAGCAAGG----TATCTACAA-----GGGG-------------GG----Tcaggattgcagaggggctacctatgtgagctctggagcccaactgcctgcctgggaatcccagctcacccactgactagctgtgtgactcagggcaagttctttaaccactctgtgcctctgtctgcgcctcactctccttgcccctaaaacaggggtaagcaaagtacccacctcccaggatttttgtgaggctaaaatgagataacacctagcaca---cttgccagacaag---aaaagttctatTTTTCCCCAGCACAATGTTAAAAGGGTTGCCTCTGGGATTTTGTGTGCTTTT- i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35114505 423 + 104879549 GGGTGGAAGATGGTGCG-----------------TGTCT-----ACTGCCTGGTGGTTTTGGATCTCTATCGCCTACTCAGAATCTGAACCCTAGCCTGTGTGTGTGAGAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCATGTGCACATACAAA---------------AACAGCAAGG----TATCTATAA-----GGGG-------------GG----Tcaggattgcagaggggctacctgtgtgagctctggagcccaactgccttcctgggaatcccagctcacccactgactagctgtgtgactcagggcaagttccttaaccactc--tgcctctgtctgagcctcactctccttgcccctaaaacaggggtaagc-aagtacccaccccccaggatttttgtgaggct-aaatgagataacacctagcaca---cttgccagaca-----gaaagttctATTTTTCCCCGGCACAATGTTAATAGGGTTGCCTCTGGGATTTTGTGCGCTTTC- i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73909725 429 - 130959383 GGGCAGAAGATGGTGCG-----------------TGTCT-----ACTGCCCGGTGGTTTTGGATCTCTATCGCCTACTCAGAATCTGAATCCTAGCCTGTGTGTGTGAAAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCGTGTGCACATACAAA---------------AACAGTAAGG----AATCTACAA-----GGGG-------------GG----TcaggattgcagaggggctacctgtgtgagctctggagcccaactgcctgcctggggatcccagctcacccactgactagctgtatgactcagggcaagttccttaaccactctgtgcctctgtctgcgcctcactctccttgcccctaaaacagggataagcaaggtacccacctcccaggatttctgtgaggctaaaatgagataacacCTAGCACA---CTTGCCAGACAAG---AGAAGTTCTATTGTTCCCCAGCACAATGTTAACAGGGTTGCCTCTGGGATTTTGTGTGCTTTT- i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75469979 429 - 133195287 GGGCAGAAGATGGTGCG-----------------TGTCT-----ACTGCCCGGTGGTTTTGGATCTCTATCGCCTACTCAGAATCTGAATCCTAGCCTGTGTGTGTGAAAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCGTGTGCACATACAAA---------------AACAGCAAGG----AATCTACAA-----GGGG-------------GG----TcaggattgcagaggggctacctgtgtgagctctggagcccaactgcctgcctggggatcccagctcacccactgactagctgtatgactcagggcaagttccttaaccactctgtgcctctgtctgcgcctcactctccttgcccctaaaacagggataagcaaggtacccacctcccaggatttttgtgaggctaaaatgagataacacCTAGCACA---CTTGCCAGACAAG---AGAAGTTCTATTGTTCCCCAGCACAATGTTAACAGGGTTGCCTCTGGGATTTTGTGTGCTTTT- i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73333682 429 - 125196307 GGGCAGAAGATGGTGCG-----------------TGTCT-----ACTGCCCGGTGGTTTTGGATCTCTATCGCCTACTCAGAATCTGAATCCTAGCCTGTGTGTGTGAAAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCGTGTGCACATACAAA---------------AACAGCAAGG----AATCTACAA-----GGGG-------------GG----TCAGGATTGCAGAGGGGCTACCTGTGTGAGCTCTGGAGCCCAATTGCCTGCCTGGGGATCCCAGCTCACCCACTGACTAGCTGTATGACTCAGGGCAAGTTCcttaaccactctgtgcctcTGTCTGCGCCTCACTCTCCTTGCCCCTAAAACAGGGATAAGCAAGGTACCCACCTCCCAGGATTTTTGTGAGGCTAAAATGAGATAACACCTAGCACA---CTTGCCAGACAAG---AGAAGTTCTATTGTTCCCCAGCACAATGTTAACAGGGTTGCCTCTGGGATtttgtgtgctttt- i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72166317 430 - 125710982 GGGCAGAAGATGGTGCG-----------------TGTCT-----ACTGCCCGGTGGTTTTGGATCTCTATCGCCTACTCAGAATCTGAATCCTAGCCTGTGTGTGTGAAAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCGTGTGCACATACAAA---------------AACAGCAAGG---TTATCTACAA-----GGGG-------------GG----TcaggattgcagaggggctacctgtgtgagctctggagcccaactgcctgcctgggaatcccagctcacccactgactagctgtgggactcagggcaaattccttaaccactctgtgcctctgtctgcgcctcactctccttgcccctaaaacagggataagcaaggtacccacctcccaggatttttgtgaggctaaaatgagataacacCTAGCACA---CTTGCCAGACAAG---AGAAGTTCTATTGTTCCCCAGCACAATGTTAACAGGGTTGCCTCTGGGATTTTGTGTGCTTTT- i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75626181 438 - 121768101 GGGCGGAGGATGGTGCA-----------------TGGCT-----ACTGCCTGGTGGTTTCAGACCTCTATCGCCTACTCAAAATCTGAATTCTAGTCTGTGTGTGTGAGAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTGTGTGCATACACAAA---------------AACAGCAAGG----TATCTACAAGTTGCGGGG-------------GGTGGTTcaggattacagaggggctacctgtgtgagctctggagcccaactgcctggctgggaatcacagctcacccactgactagctgtgtgactcactgcaagttccttaaccactctgtgcctctgtctgcacctcactctccttgcccttaaaacaggggtaaacaaagtacccacctctcagggtttttgtgaggctataatgagataacacttagcaca---cttgccagacaag---aaaagctcTACTTTTCCCCAGCACAATGTTAATAGGGTTGCCTCTGGGATTTTGTGTGCTTTT- i calJac3.chr12 C 0 C 0 s mm10.chr14 24218894 364 + 124902244 AGACCCAGCA-GGCCCA-----------------TGTCT-----AGTGCCTAGTGGTCCACGGGCTCCACCACCTACTTGGAACCAGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTGTAGACATACAA---------------------CAAGG----A---TGCAA------GAT-------------AG----CCAGGATCTTGGGGCTGCTACTGGTGTgagctctggagcccaactacctagtcgggaatcccagttcgtgcgccaaccagct---------caggctcattctttaacca------------gcctgtgctttagtctcgtcacctataacacagggatGCTT-CCGTAGCCACAGCCCGGGACCGCTGGGAAACCA-----AGGCAACAA-TAGCATG----GTGCCTGACATGTGACGAAGTGCCATCCTCTCCAGGCACTATGCAAACA--GCTCCCTCTGGGGTTTCCTGTACTTTG- i mm10.chr14 C 0 I 57 s canFam3.chr4 27781245 642 + 88276631 GGGTAGAAGATGGTGCAGCACTGCCATGCCCATCCGTCTGCACCACTGAATGGTGGT-TAGAGTTTCCATCACAAACTGAGAATCTGGATAGTAGCCTGCATGTGTAGAAGGACACGCTGTgggacgcctcggcggctcaggggttaagcatctgcctttggctcagggcgtgatcctggtcccgagatcgagtcctgcatcgggcctgcttctccctctgcctgtgtctcagcctctctctctctcatgaataaataaaatcttaaaaaaaaaAAAATGAAGGACACGACGTGTGCACATACAAACTGATCAGATGTCCGCACACCAAGGACAGTGTCCCAGA-----GGGGTGGGTGGTCGGGTGG----Tcagtgtcccagaggggtcaccagggtga-ctctgaagcccaccc-cctgcc-gggaatcccagctcaaacac-gtc---ctgtgtgactcagggcaccttctataacctctctgtg------------cctcactttcctctcccatgaaacagggataataaaagtacctacctcccagggtttctgcgaggatgaaacgagataacatttggcacgatgcttggcatacaat---caaagctccatTTTCCCCCAGCACAATGTTAATAGGGTTGCCTCTGGGATTCTGTGTGCCTTTC i canFam3.chr4 I 109 C 0 a score=304386.000000 s hg38.chr10_KI270825v1_alt 133166 95 + 188315 ctttttcttcttcattaattaaattttctacatgaatgtgcatgctttattgtcagcaaagaataaagcttttttttttttTTTTTTTTT----GATGG s panTro4.chr10 76510662 93 + 133524379 ctttttcttcttcattaattaaattttctacatgaatgtgcatgctttattgtcagcaaagaataaagc--ttttttttttttTTTTTTT----GATGG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76180001 90 - 133410057 CTTTTTCTTCTTCATTAATTAAATTTTCTACATGAATGTGCATGCTTTATTGTCAGCGAAGAATAAAGC-----TTTTTTTTTTTTTTTT----GATGG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35114928 90 + 104879549 CTTT---TTCTTCATTAATTAAATTTTCTACATGAATGTGCATGCTTTATTGTCAGCAAAGAATAAAGC--ttttttttttttttctttt----GATGG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73910154 84 - 130959383 CTTTTTCTTC----TTAATTAAATTTTCTACATGAATGTGCATGCTTTATTGTCAGCAAAGAATAAAGC-------TTTTTTTTTTTTTT----AATGG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75470408 83 - 133195287 CTTTTTCTTC----TTAATTAAATTTTCTACATGAATGTGCATGCTTTATTGTCAGCAAAGAATAAAGC--------TTTTTTTTTTTTT----AATGG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73334111 88 - 125196307 ctttttcttc----ttaattaaatTTTCTACATGAATGTGCATGCTTTATTGTCAGCAaagaataaagc---tttttttttttttttttt----aatgg i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72166747 88 - 125710982 CTTTTTCTTC----TTAATTAAATTTTCTACATGAATGTGCATGCTTTATTGTCAGCAAAGAATAAAGC---tttttttttttttttttt----AATGG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75626619 84 - 121768101 CTCTTTCTTCTTCATTAATTAAATTTTCTACATGAATGTGCATGTTTTATTGTCAGCAAAGAATAAAGC-----------TTTTTTTTTT----AATGG i calJac3.chr12 C 0 C 0 s canFam3.chr4 27781887 96 + 88276631 CTTTTTCTTCTTCATTAATTGAATTTTCTACATGAATGTGCATGCTTTATTGTCAGCAAAGAATAAAGC---TTCTTTTTTTTTTTTTTTCTGAGATAG i canFam3.chr4 C 0 C 0 e mm10.chr14 24219258 57 + 124902244 I a score=622613.000000 s hg38.chr10_KI270825v1_alt 133261 184 + 188315 GGTAGGAAGAACAGCTCAGAAT--CCCAAGTAA-CCCTTTCTTTTAAACACAGAGGATGGAAGCAGCC----CT----CTCTCTGCTGGTCTATTTTAGGATCTTCTGGATGGGCAAGGAGTTCTACTGCCCAAAGCAGCCCAACCTTTTCTGCTCCCTGATTCCCAGCGTACCCCTTCCCCACCTC------TGCCCATC s panTro4.chr10 76510755 184 + 133524379 GGTAGGAAGAACAGCTCAAAAT--CCCAAGTAA-CCCTTTCTTTTAAACACAGAGGATGGAAGCAGCC----CT----CTCTCTGCTGGTCTATTTTAGGATCTTCTGGATGGGCAAGGAGTTCTACTGCCCAAAGCAGCCCCACCTTTTCTGCTCCCTGATTCCCAGCGTACCCCTTCTCCCCCTC------TGCCCATC i panTro4.chr10 C 0 M 972 s ponAbe2.chr10 76180091 184 - 133410057 GGTAGGAAGAACAGCTCAGAAT--CCCAAGTAA-CCCTTTCTTTTAAACACAGAGGACGGAAGCAGCC----CT----CTCTCTGCTGGTCTATTTTAGGATCTTCTGGATGGGCAAGGAGTTCTACTGCCCAAAGCAGCCCAACCTTTTCTGCTCCCTGATTCCCAGCGTaccccttctccacctc------tgcccatc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35115018 182 + 104879549 GGTAGGAAGAACAGCTCAAAAT--CCCAAGTAA-CCCTTTGTTTTAA--ACAGAGGACGGAAGCAGCC----CT----CTCTCTGCTGGTCTAGTTTAGGATTACCTGGATGGGCAAGGAGTTCTACTGCCCAAAGCAGCCCAACCTTTTCTGCTCCCTGATTCCCAGTGTACCCCTTCTCCACCTC------TGCCCATC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73910238 184 - 130959383 GGTAGGAAGAACAGCTCGGAAT--CCCAAGTAA-CCCTTTCCTTTAAACACAGAGGACGGAAGCAGCC----CT----CTTTCTGCTGGTCTATTTTAGGATCTTCTGGATGGGTAAGGAGTTCTACTGCCCAAAGCAGCCCAACCTTTTCTACTCCCTGATTGCCAATGTACCCCTTCTCCACCTC------TGCCCATC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75470491 184 - 133195287 GGTAGGAAGAACAGCTCGGAAT--CCCAAGTAA-CCCTTTCCTTTAAACACAGAGGACGGAAGCAGCC----CT----CTTTCTGCTGGTCTATTTTAGGATCTTCTGGATGGGCAAGGAGTTCTACTGCCCAAAGCAGCCCAACCTTTTCTACTCCCTGATTGCCAATGTACCCCTTCTCCACCTC------TGCCCATC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73334199 184 - 125196307 ggtagGAAGAACAGCTCGGAAT--CCCAAGTAA-CCCTTTCCTTTAAACACAGAGGACGGAAGCAGCC----CT----CTTTCTGCTGGTCTATTTTAGGATCTTCTGGATGGGGAAGGAGTTCTACTGCCCAAAGCAGCCCAACCTTTTCTACTCCCTGATTGCCAATGTACCCCTTCTCCACCTC------TGCCCATC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72166835 182 - 125710982 GGTAGGAAGAACAGCTCAGAAT--CCCAAGAAA-CCCTTTCCTTTAAACACAGAGGACGGAAGCAGCC----------CTTTCTACTGGTCTATTTTAGGATCTTCTGGATGGGCAAGGAGTTCTACTGCCCAAAGCAGCCCAACTTTTTCTACTCCCTGATTGCCAACGTACCCCTTCTCCACCTC------TGCCCATC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75626703 189 - 121768101 GGTAGGAAGAACAGCTCAGAATCCCCCAAGTAA-CCCTTTCC-TTAAACACAGAGGACAGAAGCAGTCCTCTCT----CTTTCTGCTGGTCTGTTTTAGGATCTTTCGGAAGGGCAGGGACTTCTACTTCCCAAAGCAGCCCAATCTTTTCTGTTCCCTGATTCCCAGCGTACCCCTTCTCCACCTC------TGCCCATC i calJac3.chr12 C 0 C 0 s mm10.chr14 24219315 179 + 124902244 GTTGAGAAGGAAAAGTCAGAAT--CCCAAACAAGCTTTTTCTTCCAAATAC-----------GCAGCC----CTGTCACTCAGTGCTCATTCCCCTT-GGAACGCCCCGTTAGGCTTTAAGCTCTACAGGCAGAGGCAAGCCTGGC-TCACTGCTCCCTCACT--CAGTG-AGGCCTTCTCTAACCCCCATGACGCCCACC i mm10.chr14 I 57 C 0 s canFam3.chr4 27781983 148 + 88276631 GGTAGAAAGAACAAGTCATAAT--CCCAAGTAA-CCCTTTCCTCGAAACAC--AGTCCTAAAGTGGCC----TT----CTCCTTGCCGGTCTGTTTT-----------------CAGGGGGTCTTCTTG-----------------TTTTCTGCTCCCTGACTCTCGCTATACCTCTTCTCTATCCG------TGTGCATC i canFam3.chr4 C 0 C 0 a score=1396683.000000 s hg38.chr10_KI270825v1_alt 133445 574 + 188315 CAGAAAaactcaaatctcacctcctccaagaagccctcgctgCTAGCTCA----GCACCTCTCTTCCTCCTGGGGAACAAGGCCTTTCCTCACTCT-GCCCTCCCCTAGCTGGCA----------------------CTATCCACTCCAGA-------GGTCTT-GTACCGGTCT----CTGTTCCAGGGGCAAGGGGTTTGCCAAG-------ACCCCAGCACAG-CGGTCTTGAGGGGCAGGGCCACCTTCCTTCCTATGTCCTTTCAAAGCACTCGCTCTGCTTTTCTTCTTGGA---ACTTCGATACAACCTTAT--GAGAGGTGGACATGGGTTCAGGGAAGAAAAGTGATGAGCAGGTCACACTGCTGGACTTAACCCCAGTCTGACCAAGTCC-A--TCAGGGCTCACTCTGCAGCCCCAGGCTGCTTCCCATGGGAGGCTCACAGCAGG-CACTC-AGCTGACAGA-----CC---CTCAC--CCGCAGGGCAG-------------------------CACTGCCCTGGCCCATCATACATCTCT-----------------------------TCCTCCACCC----TGTCCCCGCCAATGCC---------GTTTCACTACTCACG------------------------------------------------CCCCTTCTCCTTCC----TCCCCAGGA----------------TTTCCCTTCTCCTCTGGCTG-TGCTT--TGGTCTGCAGTGACCCTAGCTGA s ponAbe2.chr10 76180275 574 - 133410057 cagaagaactcaaatctcacctcctccaagaagccctcgctgCTAGCTCA----GCACCTCTCTTCCTCCTGGGGAACAAGGCCTTTCCTCACTCT-GCCCTCCCCTAGTTGGCA----------------------CTATCCACTTCAGA-------GGTCTT-GTACCGGTCT----CTGTTCCAGGGGCAAGGGGTTTGCCAAG-------ACCCCAGCACAG-CGGTCTTGAGGGGCAGGGCCACCTTCCTTCCTATGTCCTTTCAAAGCACTCGCTCTGCTTTTCTTCTTGGA---ACTTCGATACAACCTTAT--GAGAGGGGGACATGGGTTCAGGGAAGAAAAGTGATGAGCAGATCACACTGCTGGACTTAATCCCAGTCTGACCAAGTCC-A--TCAGGGCTCACTCTGCAGACCCAGGCTGCTTCCCATGGGAGGCCCACAGCAGG-CACTC-AGCTGACAGA-----CC---CTCAC--CCACAGGGCAG-------------------------CACTGCCCTGGCCCGTCATACATCTCT-----------------------------TCCTCCACCC----TGTCCCCGCCAACGCC---------GTTTCACTACTCACG------------------------------------------------CCCCTTCTCCTTCC----TCCCCAGGA----------------TTTCCCTTCTGCCCTGGCTG-TGCTT--TGGTCTGCAGTGGCCCTGGCTGA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35115200 573 + 104879549 CAGAAAaactcaaatctcacctcctccaagaagccctcgctgCTAGCTCA----GCACCTCTCTTCCTCCTAGGGAACAAGGCCTTTCCTCACTCT-GCCCTCCCCTAGCTGGCA----------------------CTATCCACTCCAGA-------GGTCTT-GTA-CAGTCT----CTGTTCCAGGGGCAAGGGGTTGGCCAAG-------ACCTCAGCACAG-CGGTCTTGAGGGGCAGGGCCACCTTCCTTCCTATGTCCTTTCAAAGCACTCGCTCTGCTTTTTTTCTTGGA---ACTTCGATACAACCTTAT--GAGAGGTGGACATGGGTTCAGGGAAGAAAAGTGATGAGCAGGTCACACCGCTGGACTTAACCCCAGTCTGACCAAGTCC-A--TCAGGGCTCACTCTGCAGCCCCAGGCTGCTTCCCATGGGAGGCCCACAGCAGG-CACTC-AGCTGACAGA-----CC---CTCAC--CCGCAGGGCAG-------------------------CACTGCCCTGGCCCGTCATCCATCTCT-----------------------------TCCTCCACCC----TGTCCCCGCCAACGCC---------GTTTCACTACTCACG------------------------------------------------CCCCTTCTCCTTCC----TCCCCAGGA----------------TTTCCCTTCTCCCCTGGCTG-TGCTT--TGGTCTGCAGTGGCCCTGGCTGA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73910422 574 - 130959383 CAGAAAaactcaaatctcacctcctccaagaagccctcgctgCTAGCTCA----GCACCTCTCTTCCTCCTGGGGAACAAGGCCTTTCCTCACCCT-GCCCTCCCCTAGCTGGCA----------------------CTATCCACTCCAGA-------GGTCTT-GCACCAGTCTCTGACTGTTCCAGGGGCAAGGGGTTTGCCAAG-------ACCCCAGCACAG-CGGTCTT-AAGGGCAGGGCCACTTTCCTTCCTATGTCCTTTCAAAGCACTTGCTCTGCTTTTCTTCTTGGA---ACTTCGATACAACCTT-T--GAGAGCTGGACATGGGTTCAAGGAAGAAAAGTGATGAGCAGGTCACACCACTGGACTTAACCCCAGTCTGACCAAGTCC-A--TCAGTGCTCACTCTGCAGCCCCAGGCTACTTCCCATGGGAGGTCCACAGCAGG-CACTC-AGCTGACAGA-----CC---CTCAC--CTGCAGGGCAG-------------------------CACTGCCCTGGCCCGTCAACCATCTCT-----------------------------TCTTCCACCC----TGTCCCCACCAACGCC---------GTTTCACTACTCGTG--------------------------------------------------CCTTTTCCTTCC----TCCCCAGGA----------------TTTCCCTTCTCCCCTGGCTG-TGCTT--TGGTCTGCAGTGGCCCTGGCTGA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75470675 574 - 133195287 CAGAAAaactcaaatctcacctcctccaagaagccctcgctgCTAGCTCA----GCACCTCTCTTCCTCCTGGGGAACAAGGCCTTTCCTCACCCT-GCCCTCCCCTAGCTGGCA----------------------CTATCCACTCCAGA-------GGTCTT-GCACCAGTCTCTGACTGTTCCAGGGGCAAGGGGTTTGCCAAG-------ACCCCAGCACAG-CGGTCTT-AAGGGCAGGGCCACTTTCCTTCCTATGTCCTTTCAAAGCACTTGCTCTGCTTTTCTTCTTGGA---ACTTCGATACAACCTT-T--GAGAGCTGGACATGGGTTCAAGGAAGAAAAGTGATGAGCAGGTCACACCACTGGACTTAACCCCAGTCTGACCAAGTCC-A--TCAGTGCTCACTCTGCAGCCCCAGGCTACTTCCCATGGGAGGTCCACAGCAGG-CACTC-AGCTGACAGA-----CC---CTCAC--CCGCAGGGCAG-------------------------CACTGCCCTGGCCCGTCAACCATCTCT-----------------------------TCTTCCACCC----TGTCCCCACCAACGCC---------GTTTCACTACTCATG--------------------------------------------------CCTTTTCCTTCC----TCCCCAGGA----------------TTTCCCTTCTCCCCTGGCTG-TGCTT--TGGTCTGCAGTGGCCCTGGCTGA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73334383 574 - 125196307 CAGAAAAACTCAAatctcacctcctccaagaagccctcgCTGCTAGCTCA----GCACCTCTCTTCCTCCTGGGGAACAAGGCCTTTCCTCACCCT-GCCCTCCCCTAGCTGGCA----------------------CTATCCACTCCAGA-------GGTCTT-GCACCAGTCTCTGACTGTTACAGGGGCAAGGGGTTTGCCAAG-------ACCCCAGCACAG-CGGTCTT-AAGGGCAGGGCCACCTTCCTTCCTATGTCCTTTCAAAGCACTTGCTCTGCTTTTCTTCTTGGA---ACTTCGATACAACCTT-T--GAGAGCTGGACATGGGTTCAAGGAAGAAAAGTGATGAGCAGGTCACACCACTGGACTTAACCCCAGTCTGACCAAGTCC-A--TCAGTGCTCACTCTGCAGCCCCAGGCTGCTTCCCATGGGAGGTCCACAGCAGG-CACTC-AGCTGGCAGA-----CC---CTCAC--CCGCAGGGCAG-------------------------CACTGCCCTGGCCCGTCAACCATCTCT-----------------------------TCTTCCACCC----TGTCCCCACCAACGCC---------GTTTCACTACTCgtg--------------------------------------------------ccttttccttcc----tccccaggA----------------TTTCCCTTCTCCCCTGGCTG-TGCTT--TGGTCTGCAGTGGCCCTGACTGA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72167017 573 - 125710982 CA-AAAaactcaaatctcacctcctccaagaagccctcgctgCTAGCTCA----GCACCTCTCTTCCTCCTGGGGAACAAGGCCTTTCCTCACCCT-GCCCTCCCCCAGTTGGCA----------------------CTATCCACTCCAGA-------GGTCTT-GCACCAGTCTCTGACTGTTCCAGGAGCAAGGGGTTTGCCAAG-------ACCCCAGCACAG-CGGTCTT-GGGGGCAGGGCCACCTTCCTTCCTATGTCCTTTCAAAGCACTTGCTCTGCTTTTCTTCTTGGA---ACTTCGATACAACCTT-T--GAGAGCTGGACATGGGTTCAAGGAAGAAAAGTGATGAGCAGGTCACACCACTGGACTTAACCCCAGTCTGACCAAGTCC-A--TCAGTGCTCACTCTGCAGCCCCAGGCTGCTTCCCATGGGAGGTCCACAGCAGG-CACTC-AGCTGACAGA-----CC---CTCAC--CCGCGGGGCAG-------------------------CACTGCCGTGGCCCGTCAACCATCTCT-----------------------------TCTTCCACCC----TGTCCCCACCAACGCC---------GTTTCACTACTCACG--------------------------------------------------CCTTTTCCTTCC----TCCCCAGGA----------------TTTCCCTTCTCCCCTGGCTG-TGCTT--TGGTCTGCAGTGGCCCTGGCTGA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75626892 564 - 121768101 CAGAAAaactcaaatctcacctcctccaagaagccctcgctACTAGCTCA----GCACCTCTCTTCCTCCTGGGGAACAAGGCCTTCCCTCACCCT-GCCCTCCCCTAACCGGCA----------------------CTATCCACTCCAGA-------GGTCTT-GCACCCGTCTCTGACCGTTCCAGGGACAAGGGGTTCATCAAG-------ACTCCTGCAGAG-TGGTCTT-GAAGGCAGGGCCACCTTCCTTCCTGTGCCCTTTCAAAGCATTCACTCTATTTTTCTTCTTGGA---ACTTCGATACAAGCTTAT--GAGAGGTGGACGTGGGTTCAGGGAAGAGAAGTGATGAGCAGGTCACACCACTGAACTT-ACCCCAGTCTGACCAAGTCC-A--TCAGGACTCACTATTTGGCCTCCGGCTGCTTCCCACAGGAGGCCCACAGCAGG-CACTC-AGCTAACAGA-----CC---CTCAC--CCACTGGCCAG-------------------------CACTGCCCTGGCCCATCATGCATCTCT-----------------------------TCCTCCATCCAGTTGGTCCCCTCCAACACT---------GTTTCACTACTCACG------------------------------------------------CCCCTTCTCCTTCC----TCCTCAGGA----------------CTTCCCTCCTCCCCTAGCTG-TGCTT--TCGTCTG---------------- i calJac3.chr12 C 0 C 0 s mm10.chr14 24219494 600 + 124902244 CACAGAGACTCCAGGATCCCCT-CTTCAAGGACCTCTCCTGGCTAGCCTG----GCACCTCTCTTTCTCTTGGTGAACACAATTTCAACTTGCCCC--CGTTCCTCCTGTATGTG----------------------CCTCCCCCCCCCCA-------GGTCAT-GCCCCCTTCTCT--CTGCT----------------------------------------------------------------CTTTCCCACCCAGG-----------------CTCCACTTCTCTTCGTGGGTTCTCCTCAAGGTAGCCTC-TCAGAGAAGTGATCCTGGATTCAGGGAAGGGAAGGGAAACTGAGACAACA--------------CCCAGAATAACCCAGTCCTG--TGATGGCTCACTCCACG-----TGGAGTCTCCACATGACA----CAGGGCAGG-CTCTG-ATC-AACAGA-----CCAGATTCAATGTAGCAGGCCAAGTCTTATGTCCTCCCGTCCTCCCTTCCCTGCCTCGTCCCATCctctctctctctctgtctctctctgtctctctctgtctctctttctctc----tgtctctctctctgtctctctctgtgtgtctctctctgtgtctctctgtgtctctctgtgtctctctctctctctctctctctctctctctctctctctctc----tctTCCAGT----------------CCTTCCTCCACCTCAGGCTG-TGTGTGCTGCTTTGCAAAGGCTCCATCAAG i mm10.chr14 C 0 C 0 s canFam3.chr4 27782131 602 + 88276631 CAGTAAGACTCAAGCCGGGCCTTGTCCCAGAAGCTCCTCCCATGGGCACATACTGCAACCTTCCTGCTCTAGGGCATCA---CCGTTCCCTACTCTTGCCCTCCCCTCTCTGGCATTTGGCCCCCACACTCCCACGCCCCCACTCTCCAGAGCAAGCTGGTCTTAACACCCGTCTCTGACAGTTTCCAGGGGGATGCACTTGCCAGAGCACTCCACCCCGCCATGGACGGTCTC-AAGGGCAGGCCCACC-TCCTTCCATTGCAATTTCAAAGCACTCACTCAACTTCTGCTCTGGAA---ACCTCATGACAACCCTCT--GGATTGTGGATGAAGGGTTCAGGAGGGAAAGGAATGAGACAGGCCCACAGCTGGACTTAAAACCAGTCCAACCGATTCC-AATCGAGGACTCATTCTCGG-------------TTCTAAGGGAGACCTACAGCAGGACCCTCGGGCCAACAGAGAGGCCT---GGCTC--CATAAGGGCAG-------------------------AACCATACTGGCCACCGTGGCACCTCT-----------------------------CCTTGCTCTT----T-------------CC---------CTTTCACCTCCTGGA---------------------------------------------------CTGGGCTTTGCAAAGTCCGGGGGAGGGGAGGCAGATGACCTTCCCCGTCCCTCCCCGCTGCTGCAG--CAATCAGC--------------- i canFam3.chr4 C 0 C 0 e panTro4.chr10 76510939 972 + 133524379 M a score=659024.000000 s hg38.chr10_KI270825v1_alt 134019 163 + 188315 TGTTCTG--AAGGTGTTCAGAGCTAAGGAGGCCAGTGACCCCACATCAAAAGGGGAAAA-GAGAGAAAAAGTTTCTGAGCTTTGTAAAAGATGCTACTGGTTTTTCTCTGTTTTATGTCAAATAACCTGTAACACTCCTGGCAATGGTACATTTGAGCCCTGAGTA s panTro4.chr10 57012125 163 - 133524379 tgtTCTG--AAGGTGTTCAGAGCTAAGGAGGCCAGTGACCCCACATCAAAAGAGGAAAG-GAGAGAAAAAGTTTCTGAGCTTTGTAAAAGATGCTACTGGTTTTTCTCTGTTTTATGTCAAATAACCTGTAACACTCCTGGCAATGGTACATTTGAGCCCTGGgta i panTro4.chr10 n 0 n 0 s ponAbe2.chr10 76180849 163 - 133410057 TGTTCTG--AAGGTGTTCAGAGCTAAGGAGGCCAGTGACCCCACATCAAACAGGGAAAG-GAGAGAAAACATTTCTGAGCTTTGTAAAAGATGCTACTGGTTTTTCTCTGTTTTATGTCAAATAACCTGTAACACTCCTGGCAATGGTACATTTGAGCCCTGGGTA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35115773 163 + 104879549 TGCTCTG--AAGGTGTTCAGAGCTAAGGAGGCCAGTGACCCCACATCAAAAGGGGAAAG-GAGAGAAAAAGTTTCTGAGCTTTGTAAAAGATGCTACTGGTTTTTCTCTGTTTTATGTCAAATAACCTGTAACACTCCTGGCAATGGTACATTTGAGCCCTGGGTA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73910996 163 - 130959383 TGTTCTG--AAGGTGTCCAGAGCTAAGGAGGCCAGTGACCCCACACCAAAAGGGGAAAG-GAGAGAAAAAGTTTCTGAGCTTTGTAAAAGATGCTACTGGGTTTTCTCTGTTTTATGTCAAATAACCTGTAACACTCCTGGCAATGGTACATTTGAGCCCTGGGTA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75471249 163 - 133195287 TGTTCTG--AAGGTGTCCAGAGCTAAGGAGGCCAGTGACCCCACACCAAAAGGGGAAAG-GAGAGAAAAAGTTTCTGAGCTTTGTAAAAGATGCTACTGGGTTTTCTCTGTTTTATGTCAAATAACCTGTAACACTCCTGGCAATGGTACATTTGAGCCCTGGGTA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73334957 163 - 125196307 TGTTCTG--AAGGTGTCCAGAGCTAAGGAGGCCAGTGACCCCACACCaaaaggggaaag-gagagaaaaagtttCTGAGCTTTGTAAAAGATGCTACTGGGTTTTCTCTGTTTTATGTCAAATAACCTGTAACACTCCTGGCAATGGTACATTTGAGCCCTGGGTA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72167590 163 - 125710982 TGTTCTG--AAGGTGTCCAGAGCTAAGGAGGCCAGTGACCCCACACCAAAAGGGGAAAC-AAGAGAAAAAGTTTCTGAGCTTTGTAAAAGATGCTACTGGGTTTTCTCTGTTTTATGTCAAATAACCTGTAACACTCCTGGCAATGGTACATTTGAGCCCTGGGTA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75627456 156 - 121768101 ---------AAGGTGTCCAGAGCTAAGGAGGCCAGTGACCCCACACTAAAAAGGGAAAG-GAGAGAAAAGGTTTCTGAGCTTTGCGGAAGATGCTATTGGCTTTTCTCTGTTTTTTGTCAAATAACCTGTAACATTCCTGGCAATAGTACACTTGAGCCCTGGGTA i calJac3.chr12 C 0 C 0 s mm10.chr14 24220094 144 + 124902244 -GACCAAGCAAGATAACCAGAG--ACTAAGACCAGCTACCCCAACCCCAAAGGCAGAAG--------AAAGCTCCTGA---------AAGATGCTTCTGGCTTT--TCTGTCCTAAGTCACATGACCTTTAATCTTCAAAGCAAGGGTGCATTTCAGCCCTGGGTA i mm10.chr14 C 0 I 1 s canFam3.chr4 27782733 164 + 88276631 CCTTCTG--AGGGTGTCCAGAGCTAAGGAGGCCAGTGACCCCACACTAAAAGGGGAGGGGGGGAGGAGGAGGTTCTGAGCTTTATAGAAGACACCACTAGTTTTTCTCTGTTTTACGTCAAATGACCTATAACACTCCAGGCAATGGTATATTTGAGCCCTGGGTA i canFam3.chr4 C 0 C 0 a score=502027.000000 s hg38.chr10_KI270825v1_alt 134182 173 + 188315 TAGAAAAGAATTTGGCAGGACAGTTTAAAATGTCCAGACTTGAAGGTGTCAGATTTTGTAAGT-GAAGAAATTCAGAACACAGAAGCAAACCTCAATTCAGGGACACTGGAGAAGTCCCTCAGCTGTTCAGACCACAGATTCTGT------------------A-AAAAAAGGATAGCAGATGTCCCCAGATC s ponAbe2.chr10 76181012 173 - 133410057 TAGAAAAGAATTTGGCAGGACAGTTTAAAATGTCCAGACTTGAAGGTGTCAGATTTCGTAAGT-GAAGAAATTCAGAACACAGAAGCAAACCTCAATTCAGGAACACTGGAAAAGTCCCTCAGCTGTTCAGACCACAGATTCTGT------------------A-AAAAGAGGACAGCAGATGTCCCCAGATC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35115936 166 + 104879549 TGGAAAAGAATTTGGCAGGACAGTTTAAAATGTCCAGACTTGAAGGTGTCAGATTTCGTAAGT-GAAGAAATT-------CAGAAGCAAACCTCAATTCAGGGACACTGGAAAAGTCCCTCAGCTGTTCAGACTACAGATTCTGT------------------A-AAAAGAGGATAGCAGATGTCCCCAGATC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73911159 173 - 130959383 TAGAAAAGAATTTGGCAGGACAGTTTAAAATGTCCAGACTTGAAGGTGTCAGATCTCATAAGT-GAAGAAATTCAGAACACAGAAGCAAACCTCAATTCAGGGACACTAGAAAAGTCCTTCAGCTGTTCAGACCACGGATTCTGT------------------A-AAAAGAGGATAGCAGATCTCCCCAGATC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75471412 173 - 133195287 TAGAAAAGAATTTGGCAGGACAGTTTAAAATGTCCAGACTTGAAGGTGTCAGATTTCATAAGT-GAAGAAATTCAGAACACAGAAGCAAACCTCAATTCAGGGACACTAGAAAAGTCCCTCAGCTGTTCAGACCACGGATTCTGT------------------A-AAAAGAGGATAGCAGATCTCCCCAGATC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73335120 173 - 125196307 TAGAAAAGAATTTGGCAGGACAGTTTAAAATGTCCAGACTTGAAGGTGTCAGATTTCGTAAGT-GAAGAAATTCAGAACACAGAAGCAAACCTCAATTCAGGGACACTAGAAAAGTCCCTCAGCTGTTCAGACCACAGATTCTGT------------------A-AAAAGAGGATAGCAGATCTCCCCAGATC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72167753 173 - 125710982 TAGAAAAGAATTTGGCAGGACAGTTTAAAATGTCCAGACTTGAAGGTGTCAGATTTCATAAGT-GAAGAAATTCAGAACACAGAAGCAAACCTCAATTCAGGGACGCTGGAAAAGTCCCTCAGCTGTTCAGACCACGGATTCTGT------------------A-AAAAGAGGATAGCAGATCTCCCCAGATC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75627612 170 - 121768101 TAGAAAAGAATTTAGCAGGACAGTTTAAAATGTCCAGACTTGAATGTGTCAGATTTCATAAGT-GAAG---TTCAGAACACAGAAGCAAACCTCAATTCAGGGAAACTGGAAAAGTCTCTCAGCTGTTCAGACCATGGATGCTGT------------------A-AAAAGAGGATAGCAGATCTCCAAAGATC i calJac3.chr12 C 0 C 0 s mm10.chr14 24220239 155 + 124902244 TTGAA---AATTCAATGTGATAGTTTAAACTGTGCAGGC---------ACACACTTTGTAAATGGAAGAGATTCAGAACACAGAAACCAGCCTC-ATGCAGGCATATTAGAAG---TCTCCAG--AGTCTGACAATAAACTCTCT------------------AGAAGAGAGGAGAGCTGATCTCAGGGGA-- i mm10.chr14 I 1 C 0 s canFam3.chr4 27782897 181 + 88276631 CTTAAAAGAATTTAGCGGGACAGTTTAAAATGTCCAGACTTGGAGGTGTCAAATTTCATAAACCTAAGAAATTCAGAACCCATATGCAGACCTCAA-ACTGGGACACTGGAAAGGTCTCTCCAATGTTCAGACCACAGATCCCATTTAAAAAAAAAAGAAAAGA-AGAAGAAGAAGGCAGATC---------- i canFam3.chr4 C 0 C 0 e panTro4.chr10 57012288 0 - 133524379 I a score=196726.000000 s hg38.chr10_KI270825v1_alt 134355 48 + 188315 TCCCAGTCCCCTCCCAAGTTTCAAGAATTCTAAGGCTATCCT--GGGGAT s panTro4.chr10 76511911 48 + 133524379 TCCCAGTCCCCTCCCAAGTTTCAAGAATTCTAAGGCTATCCT--GGGGAT i panTro4.chr10 M 972 C 0 s ponAbe2.chr10 76181185 48 - 133410057 TCCCAGTCCCCTCCCAAGTTTCAAGAATTCTAAGGCTATCCC--GGGGAT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35116102 48 + 104879549 TCCCAGTCCCCTCCCAAGTTTCAAGAACCTTAAGGCTATCCT--GGGGAT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73911332 48 - 130959383 TCCCAGTCCCCTCTCAAGTTTCAAGAATTCTAAGGTTATCCT--GGGGAT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75471585 48 - 133195287 TCCCAGTCCCCTCTCAAGTTTCAAGAATTCTAAGGTTATCCT--GGGGAT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73335293 48 - 125196307 TCCCAGTCCCCTCTCAAGTTTCAAGAATTCTAAGGCTATCCT--GGGGAT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72167926 48 - 125710982 TCCCAGTCCCCTCTCAAGTTTCAAGAATTCTAAGGCTATCCT--GGGGAT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75627782 48 - 121768101 TCCCAGTCCCCTCCCAAGTTTCAAGAATTCTAAGGCTATCCC--AGGGAT i calJac3.chr12 C 0 C 0 s mm10.chr14 24220394 41 + 124902244 ---------CCTTGCAAGTTTTGAGGATTATAAGACTGCCTGGAGGGGAT i mm10.chr14 C 0 C 0 s canFam3.chr4 27783078 48 + 88276631 TCCCAGGCCCCTCCCAAGTTTCCAGAACTCTAAGACTGCCTA--GGGGAT i canFam3.chr4 C 0 I 7 a score=22275.000000 s hg38.chr10_KI270825v1_alt 134403 6 + 188315 ATCAGT s panTro4.chr10 76511959 6 + 133524379 ATCAGT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76181233 6 - 133410057 ATCAGT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35116150 6 + 104879549 ATCAGT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73911380 6 - 130959383 ATCAGT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75471633 6 - 133195287 ATCAGT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73335341 6 - 125196307 ATCAGT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72167974 6 - 125710982 ATCAGA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75627830 6 - 121768101 ATCAGT i calJac3.chr12 C 0 C 0 s mm10.chr14 24220435 6 + 124902244 ATCAAT i mm10.chr14 C 0 I 3 e canFam3.chr4 27783126 7 + 88276631 I a score=381933.000000 s hg38.chr10_KI270825v1_alt 134409 126 + 188315 AGTCAGCGTAggctgggcgcggtggctcacgcctgtaatcccaacactttgggaggccgaggcaggcggatcacttgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctc s panTro4.chr10 76511965 126 + 133524379 AGTCAGTGTAggctgggcacggtggctcacgcctgtaatcccaacactttgggaggccgaggcaggcggatcacttgaggtcaggagttcaagaccagcctggccaacacggtgaaaccccatctc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76181239 126 - 133410057 AGTCAGTGTAggctgggcgcaatggctcacgcctgtaatcccaacactttgggaggctgaggcaggcggatcacttgaggtcaggagttcaagaccagcctggccaacacggcgaaatcccatctc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35116156 126 + 104879549 AGCCAGTGTAggccgagcgtggtggctcacgcctgtaatcccaacactttgggaggccaaggcaggcggatcacttgaggtcaggagttgaagaccagcctggccaacacggtgaaaccccatctc i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73911386 126 - 130959383 AGTCAGTGTAggccgggcgcagtggctcacacctgtaattccaacactttggaaggccatggcaggaggatcacctgaggtcaggagttcaagaccagcctggccaacacagtgaaaccccgtctc i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75471639 126 - 133195287 AGTCAGTGTAggccgggtgcagtggctcacacctgtaattccaacactttgggaggccatggcaggaggatcacctgaggtcaggagttcaagaccagcctggccaacacagtgaaaccccgtctc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73335347 126 - 125196307 AGTcagtgtaggccgggcgcagtggctcacacctgtaatcccaacactttgggaggccgtggcaggaggatcacctgaggtcaggagttcaagaccagcctggccaacacagtgaaaccccgtctc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72167980 126 - 125710982 AGTCAGTGTAggctgggcgcagtggctcacgcctgtaatcccaacactttgggaggccgaggcaggaggatcacctgaggtcaggagttcaagaccagcctggccaacatagtgaaaccccgtctc i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75627836 126 - 121768101 AGTCAGTATAggctgggcgcagtagctcacacctgtagtcccagcattttgggaggctgaggcaggcagatcccttgaggtcaagagtttgagactagcctggccaacatggtgaaaccccatctc i calJac3.chr12 C 0 C 0 e canFam3.chr4 27783126 7 + 88276631 I e mm10.chr14 24220441 3 + 124902244 I a score=12690.000000 s hg38.chr10_KI270825v1_alt 134535 3 + 188315 tac s panTro4.chr10 76512091 3 + 133524379 tac i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76181365 3 - 133410057 tac i ponAbe2.chr10 C 0 I 7 s nomLeu3.chr18 35116282 3 + 104879549 tac i nomLeu3.chr18 C 0 I 7 s rheMac3.chr9 73911512 3 - 130959383 tac i rheMac3.chr9 C 0 I 8 s macFas5.chr9 75471765 3 - 133195287 tac i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73335473 3 - 125196307 tac i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72168106 3 - 125710982 tac i chlSab2.chr9 C 0 I 8 s calJac3.chr12 75627962 3 - 121768101 tac i calJac3.chr12 C 0 I 7 s canFam3.chr4 60493734 3 - 88276631 TAC i canFam3.chr4 n 7 C 0 e mm10.chr14 24220441 3 + 124902244 I a score=21232.000000 s hg38.chr10_KI270825v1_alt 134538 8 + 188315 CCAGGGCT s panTro4.chr10 76512094 8 + 133524379 CCAGGGCT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 57229048 8 + 133410057 CCAGGGCT i ponAbe2.chr10 n 7 C 0 s nomLeu3.chr18 69763616 8 - 104879549 CCAGGGCT i nomLeu3.chr18 n 7 C 0 s rheMac3.chr9 57048227 8 + 130959383 CCAGGGCT i rheMac3.chr9 n 8 C 0 s macFas5.chr9 75471768 8 - 133195287 taaaaatt i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73335476 8 - 125196307 taaaaatt i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 53543232 8 + 125710982 CCAGGGCT i chlSab2.chr9 n 8 C 0 s calJac3.chr12 46140492 8 + 121768101 CCAGGGCT i calJac3.chr12 n 7 C 0 s canFam3.chr4 60493737 8 - 88276631 CCAGGGCT i canFam3.chr4 C 0 C 0 e mm10.chr14 24220441 3 + 124902244 I a score=570503.000000 s hg38.chr10_KI270825v1_alt 134546 149 + 188315 CAAATGTACCACTGCCAGGAGTGTTACAGGTTATTTGACATAAAACAGAGAAAAACCAGTAGCATCTTTTACAAAGCTCAGAAACTTATTCT-CTCCTTTCCCCTTTTGATGTGGGGTCACTGGCCTCCTTAGCTCTGAACACCTTCAGA s panTro4.chr10 76512102 149 + 133524379 CAAATGTACCATTGCCAGGAGTGTTACAGGTTATTTGACATAAAACAGAGAAAAACCAGTAGCATCTTTTACAAAGCTCAGAAACTTTTTCT-CTCCTTTCCTCTTTTGATGTGGGGTCACTGGCCTCCTTAGCTCTGAACACCTTCAGA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 57229056 149 + 133410057 CAAATGTACCATTGCCAGGAGTGTTACAGGTTATTTGACATAAAACAGAGAAAAACCAGTAGCATCTTTTACAAAGCTCAGAAATGTTTTCT-CTCCTTTCCCTGTTTGATGTGGGGTCACTGGCCTCCTTAGCTCTGAACACCTTCAGA i ponAbe2.chr10 C 0 n 0 s nomLeu3.chr18 69763624 149 - 104879549 CAAATGTACCATTGCCAGGAGTGTTACAGGTTATTTGACATAAAACAGAGAAAAACCAGTAGCATCTTTTACAAAGCTCAGAAACTTTTTCT-CTCCTTTCCCCTTTTGATGTGGGGTCACTGGCCTCCTTAGCTCTGAACACCTTCAGA i nomLeu3.chr18 C 0 n 0 s rheMac3.chr9 57048235 149 + 130959383 CAAATGTACCATTGCCAGGAGTGTTACAGGTTATTTGACATAAAACAGAGAAAACCCAGTAGCATCTTTTACAAAGCTCAGAAACTTTTTCT-CTCCTTTCCCCTTTTGGTGTGGGGTCACTGGCCTCCTTAGCTCTGGACACCTTCAGA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 57723886 149 + 133195287 CAAATGTACCATTGCCAGGAGTGTTACAGGTTATTTGACATAAAACAGAGAAAACCCAGTAGCATCTTTTACAAAGCTCAGAAACTTTTTCT-CTCCTTTCCCCTTTTGGTGTGGGGTCACTGGCCTCCTTAGCTCTGGACACCTTCAGA i macFas5.chr9 n 0 C 0 s papAnu2.chr9 51861198 149 + 125196307 CAAATGTACCATTGCCAGGAGTGTTACAGGTTATTTGACATAAAACAGAGAAAACCCAGTAGCATCTTTTACAAAGCTCAGaaactttttct-ctcctttccccttttGGTGTGGGGTCACTGGCCTCCTTAGCTCTGGACACCTTCAGA i papAnu2.chr9 n 0 C 0 s chlSab2.chr9 53543240 149 + 125710982 CAAATGTACCATTGCCAGGAGTGTTACAGGTTATTTGACATAAAACAGAGAAAACCCAGTAGCATCTTTTACAAAGCTCAGAAACTTTTTCT-CTTGTTTCCCCTTTTGGTGTGGGGTCACTGGCCTCCTTAGCTCTGGACACCTTCAGA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 46140500 149 + 121768101 CAAGTGTACTATTGCCAGGAATGTTACAGGTTATTTGACAAAAAACAGAGAAAAGCCAATAGCATCTTCCGCAAAGCTCAGAAACCTTTTCT-CTCCTTTCCCTTTTTAGTGTGGGGTCACTGGCCTCCTTAGCTCTGGACACCTTCAGA i calJac3.chr12 C 0 n 0 s canFam3.chr4 60493745 150 - 88276631 CAAATATACCATTGCCTGGAGTGTTATAGGTCATTTGACGTAAAACAGAGAAAAACTAGTGGTGTCTTCTATAAAGCTCAGAACCTCCTCCTCCCCCCCTCCCCTTTTAGTGTGGGGTCACTGGCCTCCTTAGCTCTGGACACCCTCAGA i canFam3.chr4 C 0 C 0 e mm10.chr14 24220441 3 + 124902244 I a score=4095.000000 s hg38.chr10_KI270825v1_alt 134695 1 + 188315 a s panTro4.chr10 76512251 1 + 133524379 a i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76181375 1 - 133410057 a i ponAbe2.chr10 I 7 C 0 s nomLeu3.chr18 35116292 1 + 104879549 a i nomLeu3.chr18 I 7 C 0 s rheMac3.chr9 57048384 1 + 130959383 A i rheMac3.chr9 C 0 n 0 s macFas5.chr9 57724035 1 + 133195287 A i macFas5.chr9 C 0 n 0 s papAnu2.chr9 51861347 1 + 125196307 A i papAnu2.chr9 C 0 n 0 s chlSab2.chr9 53543389 1 + 125710982 A i chlSab2.chr9 C 0 n 0 s calJac3.chr12 75627972 1 - 121768101 a i calJac3.chr12 I 7 C 0 s canFam3.chr4 60493895 1 - 88276631 A i canFam3.chr4 C 0 n 0 e mm10.chr14 24220441 3 + 124902244 I a score=429428.000000 s hg38.chr10_KI270825v1_alt 134696 153 + 188315 caaaaattagccaggcgtggtgatgcacgcctgtaatcccagctactcaggaggctgaggcacaagaattgcttgaacccaagaggcaaagtttgcagtgagccaagatcccgccacagcactcc-------------aggagactgtgtctc----------aaaaaaaaaaaa-----T s panTro4.chr10 76512252 154 + 133524379 caaaaattagccaggcatggtgatgcacacctgtaatcccagctactcaggaggctgaggcacaagaatcacttgaacccaagaggcaaagtttgcagtgagccaagatcccaccacagcactcc-------------aggagactgtgtctc----------aaaaaaaaaaaa----aT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76181376 158 - 133410057 caaaaattagccaggcgtggtgatgcatgcctgtaatcccagctactcaggaggctgaggcacaagaatcgcttgaacccgagaggcaaagtttgcagtgagccaagatcccaccacagcactcc-------------aggagactgtgtctc----------aaaaaaaaaaaaaaaaaT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35116293 157 + 104879549 caaaaattagccaggcgtggtgatgcacgcctgtaatcccagctactcaggaggctgaggcacaagaatcgcttgaacccaagaggcaaagtttgtagtgagccaagatcctgccacagcactcc-------------aggagactgtatctc----------aaaaaaaaaaaa-aaaaT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73911523 163 - 130959383 caaaaattagccaggcgtggtgatgcacacctgtaatcccagctactcaggaggctgaggcacaagaatcgctcgaacccgagaggcgaaatttgcagtgagccaagatcccaccacagcactctagcctgggcga--aggagactctgtctc----------aaaaaaaaaaaa------ i rheMac3.chr9 I 8 C 0 s macFas5.chr9 75471776 168 - 133195287 caaaaattagccaggcatggtgatgcacacctgtaatcccagctactcaggaggctgaggcacaagaatcgctcgaacccgagaggcgaaatttgcagtgagccaagatcccaccacagcactctagcctgggcga--aggagactctgtctc-----aaaaaaaaaaaaaaaaa------ i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73335484 171 - 125196307 caaaaattagccaggcgtggtgatgcacacctgtaatcccagctactcaggaggctgaggcacaagaatcgctcgaacccgagAGGCgaaatttgcagtgagccaagatcccaccacagcactctagcctgggcga--aggaga--ctgtctcaaaaaaaaaaaaaaaaaaaaaa------ i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72168117 160 - 125710982 caaaaattagctaggcgtggtgatgcacgcctgtaatcccagctactcaggaggctgaggcacaagaatcgctcgaacccgagaggcaaaatttgcagtgagccaagatcccaccacagcactccagcctgggcaa--aggaga--ctctctc-----------aaaaaaaaaaa------ i chlSab2.chr9 I 8 C 0 s calJac3.chr12 75627973 166 - 121768101 caaaaactagccaggtgtggtggtacacacctgtaatctcagctactcaggaggctgaggcatgagaatcacttcaactcaggaggcaaagtttgcagtgagccaatatcccaccatagcattccagcctgggcaacggtgagactccgtctc----------aaaaaaaaaaaa-----a i calJac3.chr12 C 0 C 0 e canFam3.chr4 60493896 0 - 88276631 I e mm10.chr14 24220441 3 + 124902244 I a score=22128.000000 s hg38.chr10_KI270825v1_alt 134849 8 + 188315 AGTAGTGA s panTro4.chr10 76512406 8 + 133524379 AGTAGTGA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76181534 8 - 133410057 AGTAGTGA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35116450 8 + 104879549 AGTAGTGA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73911686 8 - 130959383 GGTAGTGA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75471944 8 - 133195287 GGTAGTGA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73335655 8 - 125196307 ggtagtga i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72168277 8 - 125710982 GGTAGTGT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75628139 7 - 121768101 aGTAG-AA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27783133 8 + 88276631 AGTAATGA i canFam3.chr4 I 7 C 0 e mm10.chr14 24220441 3 + 124902244 I a score=211792.000000 s hg38.chr10_KI270825v1_alt 134857 51 + 188315 --------GTGTAAATGTCTATATCATAACAACGTGTTCTAACAAAGATCTGTCAACCA s panTro4.chr10 76512414 51 + 133524379 --------GTGTAAATGTCTATATCATAACAACATGTTCTAACAAAGATCTGTCAACCA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76181542 51 - 133410057 --------GTGTAAATGTCTATATCATAACAATGTGTTCTAACAAAGATCTGTCAACCA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35116458 51 + 104879549 --------GTGTAAATGTCTATATCATAACAATGTGTTCTAACAAAGATCTGTCAACCA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73911694 51 - 130959383 --------GTGTAAATGTCTATATCATAACAATGTGTTCTAACAAAGATCTGTCAACCA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75471952 51 - 133195287 --------GTGTAAATGTCTATATCATAACAATGTGTTCTAACAAAGATCTGTCAACCA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73335663 51 - 125196307 --------gTGTAAATGTCTATATCATAACAATGTGTTCTAACAAAGATCTGTCAACCA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72168285 51 - 125710982 --------GTGTAAATGTCTATATCATAACAACGTGTTCTAACAAAGATCTGTCAACCA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75628146 51 - 121768101 --------GTGTAAGTGTCTATATGATAACAATATGTTCTAACAAAGATCTGTCAACCA i calJac3.chr12 C 0 C 0 s mm10.chr14 24220444 51 + 124902244 --------GTATAAAAGTCACTGTCATAACAATGTGTTCTAACACAGACATGGCAATCA i mm10.chr14 I 3 I 1028 s canFam3.chr4 27783141 59 + 88276631 ATGTATATACGTACGCATCTGTGTTACAACACGGCGCCCTAACAAAGATATGTCAATCA i canFam3.chr4 C 0 C 0 a score=1093028.000000 s hg38.chr10_KI270825v1_alt 134908 350 + 188315 TGGATAATCCAGATTTTATTT--GGCT----AGTATAACGTTAGcataacaaccagttgcaacatgtttcttcagagcctagatttttaaaaa-atctataaaaggcaggtatagggc-aattagagagatttaagaagaactatagactagaggatataattgcatcagtgctgaggttcttgggtctaataatggtggtgtgtcatgtaggaatatgtactgg-------tttgtgcatacttcaaggtttaggggtaaactgtcctgatgtccacaa--cttttttccaaatgaatcaggaaaac-aagttttatatggatacatctgcagagtgagaaagtaaaaaagcaaatatggcccaggc s panTro4.chr10 76512465 350 + 133524379 TGGATAATCCAGATTTTATTT--GGCT----AGTATAACATTAGcataacaaccagttgcaacatgtttctttagagcctagatttttaaaaa-atctataaaaggcaggtatagggc-aattagagagatttaagaagaactatagactagaggatataattgcatcagtgctgaggttcttgggtctaataatggtggtgtgtcatgtaggaatatgtactgg-------tttgtgcatacttcaaggtttaggggtaaactgtcctgatgtccacaa--cttttttccaaatgaatcaggaaaac-aagttttatatggatacatctgcagagtgagaaagtaaaaaagcaaatatggcccaggc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76181593 345 - 133410057 TGGATAATCCAGATTTTATTT--GGCT----AGTATAACATTAGcataacaaccagttgcaacatgtttctttagagcctagatttttaaaaa-atctataaaaggcaggtataggac-aattagagagatttaagaagaacta-----tagaggatataattgcatcagtgctgaggttcttgggtctaataatggtggtgtgtcatgtaggaatatgtcctgg-------tttgtgcatacttcaaggtttaggggtaaactgtcctgatgtccacag--cttttttccaaatgaatcaggaaaac-aagttttatgtggatacatctgcagagtgagaaagtaaaaaagcaaatatgggccgggc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35116509 349 + 104879549 TGGATAATCCAGATTTTATTT--GGCT----AGCATAACATTAGcataacaaccagttgcaacatgtttctttagagactagatttttaaaaa-atctataaaaggcaggtataggac-aattacagagatttaagaagaactatagactagaggatataattgcatcattgctgaggttcttgggtctaataatggtggtgtgtcatgtaggaacatgtcct-g-------tttgtgcatacttcaaggtttagggataaactgtccttatgtccacaa--cttttttcc-aatgaatcaggaaaacaaagtttcatgtggatacatctgcagagtgagaaagtaaaaaagcaaatatgggccgggc i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73911745 349 - 130959383 TGGATAATCCAGATTATATTT--GGCT----AGTATAACGTTAGCCtaacaaccagctgcaacatgtttcttcagagcctagatttttaaaaa-atctataaaaggcaggaataggac-aattagagagatttatgaagaaatatagactagaggatataattgcatcagtgttgaggttcttggttctaataatggtggtatgtcatgtatgaatatgtcctgg-------tttgtgcatgcttcaaggtttaggggtaaactgtcctgatgtccacaa--cttttttccaaatggatccagaaaac-aagttttatgtggatacatctgcagagtgagaaagtaaaaaaggaaatatggg-agggc i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75472003 349 - 133195287 TGGATAATCCAGATTATATTT--GGCT----AGTATGACGTTAGCCtaacaaccagctgcaacatgtttcttcagagcctagatttttaaaaa-atctataaaaggcaggaataggac-aattagagagatttatgaagaaatatagactagaggatataattgcatcagtgttgaggttcttggttctaataatggtggtatgtcatgtatgaatatgtcctgg-------tttgtgcatgcttcaaggtttaggggtaaactgtcctgatgtccacaa--cttttttccaaatggatccagaaaac-aagttttatgtggatacatctgcagagtgagaaagtaaaaaaggaaatatggg-agggc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73335714 349 - 125196307 TGGATAATCCAGATTATATTT--GGCT----AGTATAACGTTAGCCTAACAACCAGCTGCAACATGTTTCTTCAGagcctagatttttaaaaa-atctataaaaggCAGGAATAGGAC-AATAAGAGAGATTTATGAAGAAATATAGACTAGAGGATATAATTGCATCAGTGTTGAGGTTCTTGGTTCTAATAATGGTGGTATGTCATGTATGAATATGTCCTGG-------TTTGTGCATGCTTCAAGGTGTAGGGGTAAACTGTCCTGATGTCCACAA--CTTTTTTCCAAATGGATCCAGAAAAC-AAGTTTTATGTGGATACATCTGCAGAGTgagaaagtaaaaaaggaaatatggg-agggc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72168336 349 - 125710982 TGGATAATCCAGATTATATTT--GGCT----AGTATAATATTAGCCTAACAACCAGCTGCAACATGTTTCTTCAGAGCCTAGATTTTTAAAAA-ATctgtaaaaggcaggtttaggac-aattagagagatttatgaagaaatatagactagaggatataattgcatcagtgttgaggttcttggttctaataatggaggtgtgtcatgtatgaatacgtcctgg-------tttgtgcatgcttcaaggtttaggggtaaactgtcctgatgtccacaa--cttttttccaaatggatccggaaaac-aagttttatgtggatacatatgcagagtgagaaagtaaaaaagcaaatatggg-agggc i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75628197 346 - 121768101 TGGATAATCCAGATTATATTT--GGCT----AGTATGACTTTAacataacaagcagttgcaacatgtttctttagagtctggatttttaaaaacatctataaaaggcatatataggac-aattagagaaatttgaaaggaacta-----tagaggatatgattgcatcagtgctgagtttcttgggtctaataatggtagtgtgccatataggaatatgtcctga-------tttgtgcctgcttcgaggtttaggggttaactctcctgatgtccacaa--cttttttccaaatggataaggaaaac-aagttttatgtggacacctctgcagaatgagaaagtaaaaaggcaaatttgggctgggc i calJac3.chr12 C 0 C 0 s canFam3.chr4 27783200 335 + 88276631 CTGATAATCAAGTTTATAATCCAGGTTTTTAAGAATAACATTAGcataacaaccaaatacaacgtgtttatt-agaggctcagtttttaaaaa-a--caataaaggcatgtttaggacaaatcggggagacttgaaaaggactgcatagtagaacat---actggatcagcgtggaattcctcgggtgcgatagcggtggcgtgtcatgtaggagcacgtcctgggccacacgtgacacacgcttcagtgttcaggggtgaggtgtcctcatgtccaccatttttttttccaagcaaatgagtaaaaa-caactgtatatgactatac----------agacagtaaccaggt--------------- i canFam3.chr4 C 0 C 0 e mm10.chr14 24220495 1028 + 124902244 I a score=722824.000000 s hg38.chr10_KI270825v1_alt 135258 257 + 188315 gcagtagctcactcctgtaatcccagcactttgggaggccaagggggg---gtggatca-ctgaggtcaggagttcgagaccagcccagcaaatatggtgaaaccctgtttctactaaaaatac-aaaaaaatttgccgggcatggtga------------------------cgagaggctgaggcaggagaatcgcttgaacccaggaggcagaggttgcagtgagctgagatcacaccattgcactccagcctgggccacaagagtgaaattccatct-caaaa s panTro4.chr10 76512815 256 + 133524379 gcagtagctcacgcctgtaatcccagcactttgggaggccaagggggg----tggatca-ctgaggtcaggagttcgagaccagcccagcaaatatggtgaaaccctgtttctactaaaaatac-aaaaaaatttgccgggcatggtga------------------------cgagaggctgaggcaggagaatcgcttgaacccaggaggcagaggttgcagtgagccgagatcacaccattgcactccagcctgggccacaagagtgaaattccatct-caaaa i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76181938 260 - 133410057 gcagtagctcacgcctgtaatcccagcactttgggaggccaaggggggggggtggatca-ctgaggtcaggagttcgagaccagcccggctaatatggtgaaaccccgtttctactaaaaatac-aaaaaaattagctgggcatggtga------------------------tgagaggctgaggcaggagaatcgcttgaacccaggagggagaggttgcagtgagccgagatcacgccattgcactccagcctgggccacaagagtgaaattccatct-caaaa i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35116858 258 + 104879549 gccgtagctcacgcctgtaatcccagcactttgggaggccaatggggg---gtggatca-ctgaggtcaggagtttgagaccagcccggctaatatggtgaaaccccgtttctactaaaaatacaaaaaaaattagcggggcatggtga------------------------cgagagactgaggcaggagaatcgcttaaacccaggaggcagaggttgcagtgagccgagatcacaccattgcactccagcctgggccacaagagtgaaattccatct-caaaa i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73912094 281 - 130959383 atggtagctcacgcctgtaatcccagcactttgggaagccaaggcagg----tggatca-ccgaggtcaggagttagagaccagcctgggtaatatggtgaaaccccatttctactaaaaatac-aaaaaaattagccgggcatggtggcgcacgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaacccaggaggcagaggttgcagtaagcccagatcacaccattgcactccggtttgggcaacaagagcgaaattccctctccaaaa i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75472352 281 - 133195287 acggtagctcacgcctgtaatcccagcactttgggaggccaaggcagg----tggatca-ccgaggtcaggagttagagaccagcctgggtaatatggtgaaaccccatttctactaaaaatac-aaaaaaattagccgggcatggtggcgcacgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaacccgggaggcagaggttgcagtaagcccagatcacaccattgcactccggtttgggcaacaagagcgaaattccctctccaaaa i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73336063 280 - 125196307 acggtagctcacgcctgtaatcccagcactttgggaggccaaggcagg----tggatca-ccgaggtcaggagttagagaccagcctggctaatatggtgaaaccccatttctactaaaaatac--aaaaaattagccgggcatggtggcgcacgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaacccgggaggcagaggttgcagtaagcccagatcacaccattgcactctggtttgggcaacaagagcgaaattccctctccaaaa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72168685 280 - 125710982 acggtagctcacgcctgtaatcccagcactttgggaggccgaggcagg----tggatca-ctgaggtcaggagttagagaccagcctggctaatatggtgaaaccccatttctactaaaaatac-aaaaaaattagctgggcatggtggcgcatgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaacccgggaggcagaggttacagtgagcccagatcacgccattgcactccagtttgggcaacaagagcgaaattctctct-caaaa i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75628543 280 - 121768101 acagtggctcacgtctgtaatcctagcattttgggaggctaacagggg----cggatcacctgaagtcagaagttgaagaccagcctgactaacatggtaaaataccatttctactaaatatac--aaaaaattagctgggcgtggtggtacatgcctgtagtcccagctacttgggaggctgaggcatgagaagtgcttgaacctgggaggcagaggttgcagtgagccaagactgcaccactgcactccagcttgggcaacgagagtgaaattccattt-taaaa i calJac3.chr12 C 0 C 0 e canFam3.chr4 27783535 0 + 88276631 C e mm10.chr14 24220495 1028 + 124902244 I a score=712670.000000 s hg38.chr10_KI270825v1_alt 135515 236 + 188315 aaaaaa------------gcaaatatggcaagctgttaaccactggtgagtctcggtgacgactaaacaagtgtttatcgtactttcccttccattctttgatggatctgaacattttcaaaacaaaaTGTC---AGAG----AAAGAAAGTATCATTAAAA---TGTTTAAAACAGAAAATTCGAAGAAAAATA------------ATCCCACTGCCCAAAT--AATTCTATAAAATATTTGTTGCTTACTGCA---GG--AAAAAAAAATAGGCA s panTro4.chr10 76513071 244 + 133524379 aaaaaa----aaaaaaaagcaaatatggcaagctgttaaccactggtgagtctcggtgaagactaaacaagtgtttatcgtactttcccttccattctttgatggatctgaacattttcaaaacaaaaTGTC---AGAG----AAAGAGAGTATCATTAAAA---TGTTTAAAACAGAAAATTCGAAGAAAAATA------------ATCCCACTGCCCAAAT--AATTCTATAAAATATTTGTTGCTTACTGCA---GG--AAAAAAAAATAGGCA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76182198 226 - 133410057 aaaaaa-----aaaaaaagcaaatatggtaagctgttaaccactggtgagt--------------------ggtttatcgtactttcccttccattctttgatggatctgaacattttcaaaacaaaaTGTCGAGAAAA----AAAGAGAGTATCATTAAAA---TGTTTAAAACAGAATATTTGAAGAAAAATA------------ATCCCACTGCCCAAAT--AATTCTATAAAATATCTGTTGCTTACTGCA---GG--AAAAAAAAATAGGCA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35117116 240 + 104879549 aaaaaa----------aagcaaatatggtaagctgttaaccactggtgagtctaggtgaagactaaacaagtgtttatcgtactttcccttccattctttgatggatctgagcattttcaaaacaaaatgtc---agag----aaaaaGAGTATCATTAAAA---CGTTTAAAACAGAAAATTTGAAGAAAAATA------------ATCCCACTGCCCAAAT--AATTCTATAAAATATTTGTTGCTTACTGCA---GGAAAAAAAAAAATATGCA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73912375 252 - 130959383 aaaacaaaacaaaaaaaagcaaatatggtaagctgttaaccactggtgagtctaggtgaacactaaacaagtgtttattgtactttcccttccattctttggtggatctgaacattttcaaaacaaaaTGTC---AGAGAAGAAAAGAGAGTATCATTAAAA---TGTTCAAAAC--AAAATTTGAAGAAAAATA------------ATCCCACTGCCCAATT--AATTCTATAAAATATTTGTTGCTTACTGCA---GGGAAAAAAAAAATAGGCA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75472633 252 - 133195287 aaaacaaaacaaaaaaaagcaaatatggtaagctgttaaccactggtgagtctaggtgaacactaaacaagtgtttattgtactttcccttccattctttggtggatctgaacattttcaaaacaaaatgtc---agagaagaaAAGAGAGTATCATTAAAA---TGTTCAAAAC--AAAATTTGAAGAAAAATA------------ATCCCACTGCCCAATT--AATTCTATAAAATATTTGTTGCTTACTGCA---GGGAAAAAAAAAATAGGCA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73336343 255 - 125196307 aaaacaaaacaaaaaaaagcaaatatggtAAGCTGTTAACCACTGGTGAGTCTAGGTGAACACTAAACAAGTGTTTATTGTACTTTCCCTTCCATTCTTTGGTGGATctgaacattttcaaaacaaaatgtc---agagaagaaaagagagtatcattaaaa---tgttcaaaac--aaaatttgaagaaaaata------------atcccACTGCCCAatt--aattctataaaatatttgttgcttactgcaaggggaaaaaaaaaaataggca i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72168965 254 - 125710982 aaaacaaaacaaaaaaaagcaaatatggtaagctgttaaccactggtgagtctaggtgaacactaaacaagtgtttattgtactttcccttccattctttggtggatctgaacattttcaaaacaaaaTGTC---AGAGAAGAAAAGAGAGTATCATTAAAA---TGTTCAAAAC--AGAATTTGAAGAAAAATA------------ATCCCACTGCCCAAAT--AATTCTATAAAATATTTGTTGCTTACTGTA-GGGGAAAAAAAAAAATAGGAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75628823 236 - 121768101 aaaaaa--------aaaagcaaatatggtaagttgttaaccactagtgagtcgaggtgaagactaagcaagtatttattgtattttcccttccattctttggaggagctgaacattttcaaaacaaaaTGTC---AGAGAAG-AAAGAGAGTATCATTAAAA---TATTTAAAACAGAAAATTTGAAG------A------------ATCCCACTGCCCAGAT--AATTCTATAAAATATATATTGCATACTGCA---GG---AAAAAAAATAAGCA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27783535 253 + 88276631 ------------aaaaaagccactgtggcaggctgttatccactgatgaatctaggtgacatctgtacagatgtttactgtactactcttccaacttttctgtgtactagaaaatttacaaaacaaaaTATT---GGGGAG--GGCGGAAATACTGTTAGAAATTTGtttaaaata-aaaatatgaaaaaaaataaaatGATTCAGGATACCACTGCCTAGATCACATTTTTTAAATTAT-TGCCACTTTATTCG---TG--ATTTAAAAATAGGTG i canFam3.chr4 C 0 I 147 e mm10.chr14 24220495 1028 + 124902244 I a score=38116.000000 s hg38.chr10_KI270825v1_alt 135751 14 + 188315 TCAAAAAATTAAAA s panTro4.chr10 76513315 14 + 133524379 TCAAAAAATTAAAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76182424 14 - 133410057 TCGAAAAATTAAAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35117356 14 + 104879549 TCAACAAATTAAAA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73912627 14 - 130959383 TCGAAAACTTAAAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75472885 14 - 133195287 TCGAAAACTTAAAA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73336598 14 - 125196307 tcgAAAACTTAAAA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72169219 14 - 125710982 TCAAAAACTTAAAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75629059 14 - 121768101 TCAAAAAATTAAAA i calJac3.chr12 C 0 C 0 e canFam3.chr4 27783788 147 + 88276631 I e mm10.chr14 24220495 1028 + 124902244 I a score=460883.000000 s hg38.chr10_KI270825v1_alt 135765 138 + 188315 Agccaggcatggtgg---ctcacacctataatcccaacactttgggaggctgaggcgggcagatcac-----ctgaggtcag---------------gagttcaagaccagtctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagc s panTro4.chr10 76513329 138 + 133524379 Agccaggcatggtgg---ctcacacctataatcccaacactttgggaggctgaggcgggcagatcac-----ctgaggtcag---------------gagttcaagaccagtctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76182438 138 - 133410057 agccaggcatggtgg---ctcacacctgtaatcccaacactttgggaggctgaggcaggcagatcac-----ctgaggtcag---------------gagtacaagacgagtctggccaacatggtgaaacctcatctctactaaaaatacaaaaattagc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35117370 138 + 104879549 Agccaggaatggtgg---ctcacacctgtaattccaacactttgggaggctgaggtgggtagatcac-----ctgaggtcag---------------gagttcaagaccagtctgtccaacatggtgaaaccccatctctactaaaaatacaaaaattagc i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73912641 138 - 130959383 Agccaggcaaggtgg---cttacacctgtaaacccaacactttgggaggccaaggcaggtagatcac-----ctgaggtcag---------------gagttcaagacaagcctggccaacatggcgaaaccccacctctactaaaaatacaaaaattagc i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75472899 138 - 133195287 Agccaggcaaggtgg---cttacacctgtaaacccaacactttgggaggccaaggcaggtagatcac-----ctgaggtcag---------------gagttcaagacaagcctggccaacatggcgaaaccccatctctactaaaaatacaaaaattagc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73336612 138 - 125196307 AGCCAGGtaaggtgg---cttacacctgtaaacccaacactttgggaggccaaggcaggtagatcac-----ctgaggtcag---------------gagttcaagacaagcctggccaacatggcgaaaccccatctctactaaaaatacaaaaattagc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72169233 138 - 125710982 Agccaggcatggtgg---cttacacctataatcccaacactttgggaggccaaggcaggtagatcac-----ctgaggtcag---------------gagttcaagacaagcctggccaacatggtaaaaccccatctctactaaaaatacaaaaattagc i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75629073 141 - 121768101 Agccaggcgtggtggtgtcttacacctgtaatcccagcactttgagaggccaaggcaggcagatcac-----ctgaggttag---------------gagttcaagaccagcctggccaacacggtgtaaacccgtctctactgaaaatacaaaaattagc i calJac3.chr12 C 0 C 0 s mm10.chr14 24221523 155 + 124902244 agccaggcatggtgg---cacacacctttaatcccagcac-tcgggaggcagaggcaggtggatttctgagttcaaggtcagcctggtctacagagtgagttccaggacagccaaggctacacagagaaaccctgtctcga--aaaaaaaaaaATgtcagc i mm10.chr14 I 1028 I 183 e canFam3.chr4 27783788 147 + 88276631 I a score=419280.000000 s hg38.chr10_KI270825v1_alt 135903 157 + 188315 tggatgtagtggtgcatgcctgtaaacccagctactcaggaggctgaggcgggagaatagcttgaacctgggaggcgaaggttgcagtgagtggagactgcgccactgcactccagcctgggcaacagagagagactccatct-ccaaaaataaataa s panTro4.chr10 76513467 157 + 133524379 tggatgtagtggtgcatgcctgtaaacccagctactcaggaggctgaggcgggagaatagcttgaacctggaaggcgaaggttgcagtgagtggagactgcgccactgcactccagcctgggcaacagagagagactccatct-ccaaaaataaataa i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76182576 157 - 133410057 tggatgtggtggtgcatgcctgtaatcccagctactcaggaggctgaggcgggagaatagcttgaacctgggaggcgaaggttgcagtgagtggagactgcgccactgccctccagcctgggcaacagagagagactccatct-ccataaataaataa i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35117508 157 + 104879549 tggatgtggtggtgcatggctgtaaccccagctactcaggaggctgaggcaggagaatagcttgaacctgggaggcgaagattgcagtgagtggagactgcaccactgcactccagcctgggcaacagagagggactccatct-cCataaataaataa i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73912779 145 - 130959383 tgaacgcggtggcgcatgcctgtaatcccagctacttgggaggctgaggcaggagaatagcttgagcctgggaggcgaaggtcgcagtgagtggagattgtgccgctgcactccagcctgggcaacagagagagaccccatct-cc------------ i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75473037 145 - 133195287 tgaacgcggtggtgcatgcctgtaatcccagctacttgggaggctgaggcaggagaatagcttgaacctgggaggcgaaggtcgcagtgagtggagattgtgccgctgcactccagcctgggcaacagagagagaccccatct-cc------------ i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73336750 146 - 125196307 tgaacgcggtggtgcatgcctgtaatcccagctacttgggaggctgaggcaggagaatagcttgaacctgggaggcaaaggtcgcagtgagtggagattgtgccgctgcactccagcctgggcaacagagagagaccccatctacc------------ i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72169371 151 - 125710982 tgaacgtggtggtgcatgcctgtaatcccagctactcgggaggctgaggcaggagaatagcttgaacctgggaggcgaaggtcgcagtgagtggagattgcgccactgcactccagcctgggcaacagagagagaccccatct-ccaaaa------aa i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75629214 149 - 121768101 tggacgtggtgatgcacgcctgtaatcccacctactcaggaggctgaggcaggagaatggctcaaacctggcaggcagaggttgtggtgagtagggatcgcgccattgca-tcaagcctgggtaacagaaagaaaccccatct-tcaaa-------aa i calJac3.chr12 C 0 C 0 e canFam3.chr4 27783788 147 + 88276631 I e mm10.chr14 24221678 183 + 124902244 I a score=356970.000000 s hg38.chr10_KI270825v1_alt 136060 128 + 188315 ataaataaataaa------------taaat-aaTTTTTGCTATTTAAC-AATTGATTTAAAAACAAGTGAGTAATGTTGTGCTACTGCTGCCATGTTTCATGTACCCCAAAAGGGAAAATATCCTAAGAGAATCTTTC-----------------------------------------------------------CTCT-- s panTro4.chr10 76513624 136 + 133524379 ataaataaataaa----caaataaataaat-aaTTTTTGCTATTTAAC-AATTGATTTAAAAACAAGTGAGTAATGTTGTGCTACTGCTGCCATGTTTTATGTACCCCAAAAGGGAAAATATCCTAAGAGAATCTTTC-----------------------------------------------------------CTCT-- i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76182733 140 - 133410057 ataaataaataaataaataaataaataaat-aaTTTTTGCTATTTAAC-AATTGATTTAAAAACAAGTGAGTGATGTTGTGCTACTGCTGCCATGTTTTATATACCCCAAAAGGGAAAATATCCTAAGAGAATCTTTC-----------------------------------------------------------CTCT-- i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35117665 196 + 104879549 ataaataaataaa----taaataaataaataaatTTTTGCTATTTAAA-AATTGATTTAAAAAGAAGTAAGTAATGTTGTGCTACTGCTGCCATGTTTTATGTACCCCAAAAGGGAAAATATCCTAAAAGAATCTTTCCTCTTAATAAACTAATGTTTAGGCAAACATAAAAACAACACTTAAAGAAAGAATCTTTCCTCT-- i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73912924 128 - 130959383 --aaaaaaaaaaa----------attaaaa-CATTTTTGCAATTTAAC-AATTGATTTAAAAACAAGTGAGTAATGTTGTGCTACTGCTGCCATGTTTTATATACCCCAAAGGGGAAAATATCCTAAGAGAATCTTTT-----------------------------------------------------------CTCT-- i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75473182 128 - 133195287 --aaaaaaaaaaa----------attaaaa-CATTTTTGCAATTTAAC-AATTGATTTAAAAACAAGTGAGTAATGTTGTGCTACTGCTGCCATGTTTTATATACCCCAAAGGGGAAAATATCCTAAGAGAATCTTTT-----------------------------------------------------------CTCT-- i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73336896 128 - 125196307 --aaaaaaaaaaa----------attaaaa-catttttgcaatttaAC-AATTGATTTAAAAACAAGTGAGTAATGTTGTGCTACTGCTGCCATGTTTTATATACCCCAAAGGGGAAAATATCCTAAGAGAATCTTTT-----------------------------------------------------------CTCT-- i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72169522 127 - 125710982 aaaaaaaaaaaaa----------attaaaa-CATTTTTGCAATTTAAC-AATTGATTTAAAAACAAGTGAGTAA---TGTGCTACTGCTGCCATGTTTTATATACCCCAAAGGGGAAAATATCCTAAGAGAATCTTTT-----------------------------------------------------------CTCT-- i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75629363 129 - 121768101 ataaataaataaa------------taaaa-CATTTTTGCTATTTAACAAATTGATTTTAAAACAGGTGAGTAATGTTGTGCTACTGCTGCCATGTTTTATGTACCTCAAAAGGGAAAACATCTTAAGAGAATCTTTT-----------------------------------------------------------CTCT-- i calJac3.chr12 C 0 C 0 s canFam3.chr4 27783935 114 + 88276631 atgaataaataaa------------taaaa---tctttaaaacaaaAT-AAATAA-ATAAAAATAGGTGAATAATGATG------------CATGTTTTACCTACA-CAAGAGGGAAAATACTCTGAAAATATTTTTT-----------------------------------------------------------TCCTCT i canFam3.chr4 I 147 C 0 e mm10.chr14 24221678 183 + 124902244 I a score=726487.000000 s hg38.chr10_KI270825v1_alt 136188 271 + 188315 TAAT-AAACTAATGTTTAGGCAAACAGATAAAAATAACACTTGAAG-AAA---AAATCTGGTtggctcatgcctgtaagcccagcactttgggagaccgaggtgggtcaataac--ctaagcccaggagttcaagaccagcctgggcaacatagtgagac-cctatttctacaaagagagaaagagaaa------------------------gaGAAGGAGAGGGGGAG-----GGGGGA--------AAGGGAGAGAAGGGG--AAAGGGGGAGATAGGAAAGAGACAAAAGAAAAGAGAGGAA----AAAG-A----------AAAAGAT s panTro4.chr10 76513760 271 + 133524379 TAAT-AAACTAATGTTTAGGCAAACAGATAAAAATAACACTTGAAG-AAA---AAATCTGGTtggctcatgcctgtaatcccagcactttgggagaccgaggtgggtcaataac--ctaagcccaggagttcaagaccagcctgggcaacatagtgagac-cctatttctacaaagagagaaagagaaa------------------------gagaaGgagagggggag-----ggggga--------aagggagagaagggg--aaagggggagataagaaagagacaaaagaaaagagaggaa----aaag-a----------aaaagaT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76182873 272 - 133410057 TAAT-AAACTAATGTTTAGGCAAACAGATAAAAACAACACTTCAAG-AAA---AAATCTGGTtggctcatgcctggaatcccagcactttgggagacggaggtgggtcaataac--ctaagcccaggagttcgagaccagcctgggcaacatagtgagac-cctgtttctacaaagagagaaagagaaa------------------------gagaaggagagggggag----aggggga--------aagggagagaagggg--agagggggagaTAGGAAAGAGACAAAAGAAAAGAGAGGAA----AAAG-A----------AAAAAAT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35117861 273 + 104879549 TAAT-AAACTAATGTTTAGGCAAACAGATAAAAACAACACTTAAAG-AAA---AAATCTGGTtgactcatgcctgtaatcccagcactttgggagactgaagtgggtcaatcac--ctaagcccaggagttcgagaccagcctgggcaacatagtgagac-cctatttctacaaaGACagaaagagaaa------------------------gagagggagagggggag----aggggga--------aagggagaaaagggg--agagggggagataggaaagaaacaaaagaaaagagtggaa----aaagaa----------aaaaaaT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73913052 267 - 130959383 TAAT-AAACTAATATTTAGGCAAACAGATAAAAACAGTACTTCAAG-AAA---AAATCTGATtggctcatgcctgtaatcccagcactttgggagcctgaggtgggtcgatcac--cgaagaccaggaattcaagaccagcctgggcaacatagtgagat-cctgtttctacaaag------agagaaa------------------------gacagggagatggggag----aggggga--------aaggcggagaagggg--agagggggagagagaaaagagacaaaag-aaagagaggaa----aaag-a--------aaaaaaaaT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75473310 267 - 133195287 TAAT-AAACTAATATTTAGGCAAACAGATAAAAACAGTACTTCAAG-AAA---AAATCTGATtggctcatgcctgtaatcccagcactttgggagcctgaggtgggtcgatcac--ctaagcccaggagttcaagaccagcctgggcaacatagtgagat-cctgtttctacaaaG------AGAGAAA------------------------GACAgggagatggggag----aggggga--------aaggcggagaagggg--agagggggaaagagaaaagagacaaaag-aaagagaggaa----aaag-a--------aaaaaaaaT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73337024 267 - 125196307 TAAT-AAACTAATATTTAGGCAAACCGATAAAAACAGTACTTCAAG-AAA---AAATCtgattggctcatgcctgtaatcccagcactttgggagcctgaggtgggtcgatcac--ctaagcccaggagttcgagaccagcct-ggcaacatagtgagat-cctgtttctacaaag------agagaaa------------------------gacagggagatggggag-----ggggga--------aaggcggagaagggggagaggggggagagagaaaagagacaaaag-aaagagaggaa----aaag-a--------aaaaaaaat i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72169649 276 - 125710982 TAAT-AAACTAATATTTAAGCAAACAGATAAAAACAGTACTTAAAGAAAA---AAATCTGATtggctcatgcctgtaatcccagcactttgggagcctgaggtgggtcaatcac--ctaagcccaggagttcaagaccagcctaggcaacatagtgagac-cctgtttctacaaag------aGAGAAA------------------------GACAGGGAGATGGGGAG----AGAGGGA--------AAGGCAGAGAAGGGG--AGAGGGGGAGAGAGAAAAGAGACAAAAG-AAAGAGAAGAA----AGAG-AAGAAAAAGAAAAAAAAT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75629492 264 - 121768101 TAAT-AAATTAATGTTTAGGCAAACAGATAAAAAC---GCTTAAAG-AAA---AAATCTGGTtggttcatgcctgtaatcctagcactttgggaggctgagacgggttgatcacttttaagtccaggagtttgagaccagcctgggcaacatagtgagac-cctgtttctacaaag------agagaaa------------------------ga----gagatggggga----gagggaa--------aagggggagaagggg--agagggggagagaggaaagagacaaaag-aaagagagaAA----AAAA-A------AAGAAAAAAAT i calJac3.chr12 C 0 I 285 s mm10.chr14 24221861 301 + 124902244 tgat-ataataat-ctcaaaaaaatgtaaaaaAGgaaaaattttaa-atgtttaagtcatggtggtatatgcctttaatcccagcactctgagagcacca-gcaggtgaatcac---------tgtgagttcaaggacagcctagtctgcatagcaggttacatgcctcaataacaacaacaacaacaacaagtcccagttacatGTAGTTATGGCATGAACATGGCAAGGTCCAAGGGAAACTTTAACAAGACAAAGCAAGAA--AGAAAAGGAGATGGGAGGGAAGT------GGAGAGGAGAACCCGGAAG-C----------AAACACT i mm10.chr14 I 183 I 8 s canFam3.chr4 27784049 162 + 88276631 -AATGAAACAAATGTTTAGGCAAATAA--------------TAAAG-AAA---AAATTCTATTG-----------------------------------------------TAC-------------AGTTTA--------TTAGTGGGTATAATGACTT----------------------gaaggaa------------------------ggaaggaaggaaggaag-----gaagga---------------aggaagga--aggaaggaaggaaggaaggaaATAAATgggaagggaaggg----aagg-g----------aaggga- i canFam3.chr4 C 0 C 0 a score=381053.000000 s hg38.chr10_KI270825v1_alt 136459 146 + 188315 CTATCATATAATTTCTTAGTGG--TAGAAT-------TAAAG--AAAAAA----AAAAGGATGTGGTTCCCAAAATGAGGGCCTATACAAACACAGGAGACATGATGAAG---TTTGAAAATATTCTATCCAAATA---TTCTGGTCCCCTTGTCTCTGTGTCACTG s panTro4.chr10 76514031 149 + 133524379 CTATCATATAATTTCTTAGTGG--TAGAAT-------TAAAG--AAAAAA----AAAAGGATGTGGTTCCCAAAATGAGGGCCTATACAAACACAGGAGACATGATGAAGAAGTTTGAAAATATTCTATCCAAATA---TTCTGGTCCCCTTGTCTCTGTGTCACTG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76183145 148 - 133410057 CTATCACATAATTTCTTAGTGG--TAGAAT-------TAAAA--AAAAAA----AAAAGGATGTGGTTCCC-AAATGAGGGCCTATACAAACATAGGAGACATGATGAAGAAGTGTGAAAATATTCTATCCAAATA---TTCTGGTCCCCTTGCCTCTGTGTCACTG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35118134 151 + 104879549 CTATCATATAATTTCTTAGTGG--TAGAAT-------TAAAGAAAAAAAA----AAAAGGATGTGGTTCCCAAAATGAGGGCCTATACAAACATAGGAGACATGATGAAGAAGTTTGAAAATATTCTATCCAAATA---TTCTGGTCCCCTTGCCTCTGTGTCACTG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73913319 149 - 130959383 CTACTGTATCATTTCTTAGTGG--TAAAAG------AAAAAA--AAAAAA----AAAAGGATGTGATTCCC-AAATGAGGGCCTATGCAAACATAGGAGACATGGTGAAGAAGTTTAAAAATATTCTATCCAAATA---TTCTGGTCCCTTTGCCTCTGTGTCACTG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75473577 151 - 133195287 CTACTGTATCATTTCTTAGTGG--TAGAAG----Gaaaaaaa--aaaaaa----aaaaGGATGTGATTCCC-AAATGAGGGCCTATGCAAACATAGGAGACATGGTGAAGAAGTTTAAAAATATTCTATCCAAATA---TTCTGGTCCCTTTGCCTCTGTGTCACTG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73337291 150 - 125196307 ctactgtatCATTTCTTagtgg--tagaag-----aaaaaaa--aaaaaa----aaaaggatgtgatTCCC-AAATGAGGGCCTATGCAAATATAGGAGACATGGtgaagaagtttaaaaatattctatccAAATA---TTCAGGTCCCTTTGCCTCTGTGTCACTG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72169925 156 - 125710982 CTATTGTATCATTTCTTAGTGG--TAGAATTaaagaaaaaaa--aaaaaa----aaaaGGATGTGATTCCCAAAATGAGGGCCTATGCAAACATAGGAGACATGGTGAAGAAGTTTAAAAATATTCTATCCAAATA---TTCTGGTCCCTTTGCCTCTGTGTCACTG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75630041 152 - 121768101 CTATCATACCATTTCTCAGTGG--GAGAAT-------TGAAA--AAAAAATTTTTAAAGGCCCTCATTTTGGGAATGAGGGCCTATAC-AACACAGGCGACATAGTGAAGAAGTTTTAAAATATTCTATCCAAATG---TTCTGGTCCTCTTGCCTCTGTGTCGCTG i calJac3.chr12 I 285 I 167 s mm10.chr14 24222170 130 + 124902244 CAGTCAGGCCATTTTACTGTGGGTTAAAGC-------CAGGC--CAGCAA----CACTGCATGTGGGCCAC-----TGTGTTTTGTGTACCCA------------------AATGGAAAACTATTGCATAAAGAAAAACTTCTAGTGC-TATGTCTCAATCACAACA i mm10.chr14 I 8 I 13 s canFam3.chr4 27784211 101 + 88276631 --------------------------------------------------------aggga------TCCCAAAATAAGGGCCTGTCCAATGATGGGCAACATGG-GAAGAAGCTTGGAAATATTTTACCAAACTA---TTCTGGCCCCCCTGCCTGTGGGTCCCCT i canFam3.chr4 C 0 C 0 a score=33188.000000 s hg38.chr10_KI270825v1_alt 136605 14 + 188315 GAGAGTGGTAGAAT s panTro4.chr10 76514180 14 + 133524379 GAGAGTGGTAGAAT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76183293 14 - 133410057 CAGAGTGGCAGAAT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35118285 14 + 104879549 GAGAGTGGTAGAAT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73913468 14 - 130959383 GAGAGTGGTGGAAT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75473728 14 - 133195287 GAGAGTGGTGGAAT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73337441 14 - 125196307 GAGAGTGGTGGAAT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72170081 14 - 125710982 GAGAGTGGTGGAAT i chlSab2.chr9 C 0 C 0 s mm10.chr14 24222313 14 + 124902244 CAAAAAGGCATGGT i mm10.chr14 I 13 C 0 s canFam3.chr4 27784312 14 + 88276631 GAAGGCTCGGGAAC i canFam3.chr4 C 0 C 0 e calJac3.chr12 75630193 167 - 121768101 I a score=3909489.000000 s hg38.chr10_KI270825v1_alt 136619 1155 + 188315 TTCCAGGCAGGTTCT--ATCTCC-TTTCCCATAGATAGC--ATAGCC-CCTGA-----GGCTCCCCAGAGACCCTCCGAAGTCCTGTGATTGCCCATTCAGGAGTGTGGGACCACCAAACACTACTCAAGACCAGCATGGCTTCAAGGAAGCTTTGGCCTCAGGGTAGCTGCTGCTACCACAAGCACCTTCCTCCCAGGAGCCAGAACAGCCTTCTCCATCAGCGCAGGTGACCAAGTGGCACATGGCTCACTTGGCCACCACGCTTAGGCCAAAGCAGCCCTGCATGT-CCCCATCAACCTGGCCTCCCCAAAGACCTGGATTCTGTTTCCACATCTCCACCCTC---TACCA-CACGTGGACTCTG--CAGTTCCCTG-GGACTTCACTTTTCTTGGAGAAGGAGAGAGAAAAAGGGAAGCAAATCCT----GAATTGCTCG-T-AGGATTTAAAAACCTCTCCACAGAGGGGA-GCTGGGGACAA----------GGTAGGGGAGACAGTGCTAGCAGCACAATCTGAGGACGGGTCCCCTGCCAGCCCTCCGGGC----------ACACAGGG-AGCAAAAGGAGAGGCAGAGGCACATGGGAGCAGGGGCTGGGAGATGCTGCATGGCGCAG-GCTGT---GGGCTTGGCTATTAAAGCCAGAAAAGGCCTGCCTCCTCCTGCCAATAGAGTTATCTTTTAATCCGAACCCC-AATGACACCACCTGGCACCAGCGCAGGAGCAGCTCCTGACGGCACACGAGTCACGCGGCTGGGCCCCGCGTCTATCCCTTCAGGTCAGGGCTTGCCCTGAGTGCTCCTGA--GGAAGT-GGGCCCCTGCC-----CCCTCCAT---GGCCTGGCTCCTGACAGGCCTGTGCATGCCTGAGAGGGCCAGGCAGGCGGTAAGGAAGTAGAGGAAGCTCCGTGCTGTGCAAGGTCACCAAATGCTAGATGCAAAGACCCAGAAAGGGAGGGCACTCACCCAAAGTCACCCACGCCGGGACGGGGCAGCAATCCCAGGATTCTCCTC---------------CTACCCAGATGC----GGCAAAGAGGTTTGCAGCCCAGGACAGCTGTTATCAACTAGCCAGTGCTGGAAAACAGCAGGTAGCACCCCAGACCT-----GCCACTCTCCACGTACTCAGACAACTCATGGCC-CAATCTGAAGATGGCTTT---CCTCTGAATTCTCC-----CACATCTGTGCCCTCCTGCAGGG s panTro4.chr10 76514194 1154 + 133524379 TTCCAGGCAGGTTCT--ATCTCC-TTTCCCATAGATAGC--ATAGCC-CCTGA-----GGCTCCCCAGAGACCCTCCGAAGTCCTGTGATTGCCCATTCAGGAGTGTGGGACCACCAAAGACTACTCAAGACCAGCATGGCTTCAAGGAAGCTTTGGCCTCAGGGTAGCTGCTGCTACCACAAGCACCTTCCTCCCAGGAGCCAGAACAGCCTTCTCCATCAGCGCAGGTGACCAAGTGGCACATGGCTCACTTGGCCACCACGCTTAGGCCAAAGCAGCCCTGCATGT-CCCCATCAACCTGGCCTCCCCAAAGACCTGGATTCTGTTTCCACATCTCCACCCTC---TACCA-CACGTGGACTCTG--CAGTTCCCTG-GGACTTCGCTTTTCTTGGAGAAGGAGAGAGAAAAAGGGAAGCAAATCCT----GA-TTGCTCG-T-AGGATTTAAAAACCTCTCCACAGAGGGGA-GCTGGGGACAA----------GGTAGGGGAGACAGTGCTAGCAGCACAATCTGAGGACGGGTCCCCTGCCAGCCCTCCAGGC----------ACACAGGG-AGCAAAAGGAGAGGCAGAGGCACATGGGAGCAGGGGCTGGGAGATGCTGCATGGCGCAG-GCTGT---GGGCTTGGCTATTAAAGCCAGAAAAGGCCTGCCTCCTCCTGCCAATAGAGTTATCTTTTAATCCGAACCCC-GATGACACCACCTGGCACCAGTGCAGGAGCAGCTCCTGACGGCACACGAGTCACGCGGCTGGGCCCCGCGTCTATCCCTTCAGGTCAGGGCTTGCCCTGAGTGCTCCTGA--GGAAGT-GGGCCCCTGCC-----CCCTCCAT---GGCCTGGCTCCTGACAGGCCTGTGCATGCCTGAGAGGGCCAGGCAGGCGGTGAGGAAGTAGAGGAAGCTCCGTGCTGTGCAAGGTCACCAAATGCTAGATGCAAAGACCCAGAAAGGGAGGGCACTCACCCAAAGTCACCCACGCCGGGACGGGGCAGCAATCCCAGGATTCTCCTC---------------CTACCCAGATGC----GGCAAAGAGGTTTGCAGCCCAGGACAGCTGTTATCAACTAGCCAGTGCTGGAAAACAGCAGGTAGCACCCCAGACCT-----GCCACTCTCCACGTACTCAGACAACTCATGGCC-CAATCTGAAGATGGCTTT---CCTCTGAATTCTCC-----CACATCTGTGCCCTCCTGCAGGG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76183307 1155 - 133410057 TTCCAGGCAGGGTCT--ATCTCC-TTTCCCATAAACAGT--ATAACC-CCTGA-----GGCTCCCCAGAGACCCTCCAAAGTCCTGTGATTGCCCATTCAGGAGTGTGGGACCACCAAAGACTATGCAAGACCAGCATGGCTTCAAGGAAGCTTTGGCCTCAGGGTAGCTCCTGCTACCACAAGCACCTTCCTCCCAGGAGCCAGAACAGCCTTCTCCATCAGCGCAGGTGACCAAGTGGCACATGGCTCACTTGGCCACCACGCTTAGGCCAAAGCAGCCCTGCATGT-CCCCATCAACCTGGCCTCCCCGAAGACCTGGATTCTGTTTCCACATCTCCACCCTC---TACCA-CATGTGGACTCTG--CAGTTCCCTG-GGACTTCGCTTTTCTTGGAGAAGGAGAGAGAAAAAGGGAAGCAAATCCT----GAATTGCTCATT-AGGATTTAAAAACCTCTC--CAGAGGGGA-GCTGGGGACAA----------GGCAGGGGAGACAGTGCTAGCAGCACAATCTGAGGACGGGTCCCCTGCCAGCTTCCCGGGC----------ACACAGGA-AGCAAAAGGAGAGGCAGAAGCACATGGGAGCAGGGGCTGGGAGATGCTGCATAGCGCAG-GCTGT---GGGTTTGGCTATTAAAGCCAGAAAAGGCCTGCCTCCTCCTGCCAATAGAGTTATCTTTTAATCCGAACCCCGGATGACACCACCTGGCACCAGCGAAGGAGCAGCTCCTGACGGCACACGAGTCACGCGGCTAGGCCCCGCGTCTATCCCTTCAGGTCAGGGCTTGCCCTGAGTGCTCCTGA--GGAAGT-GGGCCCCTGCC-----CCCTCCAC---GGCCTGGCTCCTGACAGGCCTGTGCATGCCTAAGAGGGCCAGGCAGGCGGTGAGGAAGTGGAGGAAGCTCTGTGCTGTGCAAGGTCACCAAATGCTAGATGCAAAGACCCAGAAAGGCAGGGCACTCACCCAAAGTCACCCACGCTGGGACGGGGCAGCAATCCCAGGATTTTCCTC---------------CTACCCAGATGC----GGCAAAGAGGTTTGCAGCCCAGGACAGCTGTTATCAACTAGCCAGTGCTGGAAAACAGCAGGTAGCACCCCAGACCT-----GCCACTCTCCACGTACTCAGACAACTCATGGCC-CAATCTGAAGATGGCTTT---CCTCTGAATTCTCC-----CAGATCTGTGCCCTCCTGCAAGG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35118299 1150 + 104879549 TTCCAGGCAGGGTCT--ATCTCCTTTTCCCATAGACAGT--ACAG-C-CCTGA-----GGCTCCCCAGAGACCCTCCGAAGT-CTGTGATTGCCCATTCAGGAGTGTGGGACCACCAAGGACTACTCAAGACCAGCATGGCTTCAAGGAAGCTTTGGCCTCAGGGTAGCTCCTGCTACCACAAGCACTTTCCTCCCAGGAGCCAGAACGGTCTTCTCCATCAGCGCAGGTGACCAAGTGGCACATGGCTCACCTGGCCACCATGCTTAGGCCAAAGCAGCCCTGCATGT-CCCCATCAACCTGGCCTCCCCAAAGACCTGGATTCTGTTTCCACATCTCCACCCTC---TACCA-CACGTGGACTCTG--CAGTTCCCTG-GGACTTCGCTTTTCT---AGGAGGAGAGAGAAAAAGGGAAGCGAATCCT----GAAGTGCTCGTT-AGGATTTAAAAACCTCTCCACAGAGGGGA-GCTGGGGAAAA----------GGTAGGGGAGACAGTGGTAGCAGCACAATCTGAGGATGGGTCCCCTGCCAGCCTCCCGGGC----------ACACAGGG-AGCAAAAGGAGAGGCAGAGGCACATGGGAGCAGGGGCTGGGAGATGCTGCATGGTGCAG-GCTGT---GGGCTTGGCTATTAAAGGCAGAAAAGGCCTGCCTCCTCCTGCCAATAGAGTTATCTTTTAATCCGAACCCCGGATGACACCACCTGGCACCAGCGCAGGAGCAGCTCCTGACGGCACACAAGTCACGCGGCTGGGCCCCGCGTCTATCCCTTCAGGTCAGGGCTTGCCCTGAGTGCTCCTGA--GGAAGT-GGGCCCCTGCC-----CCCTCCAT---GGCCTGGCTCCTGACAGGCCTGTGCATGCCTGAGAGGGCCAGGCAGGCGGTGAGGAAGTGGAGGAAGCTCCGTGCTGTGCAAGGTCACCAAATGCTAGATGCAAAGACCCAGAAAGGGAGGGCACTCACCCAAAGTCACCCACGCCGGGACGGGGCAGCAATCCCAGGATTTTCCTC---------------CTACCCAGATGC----GGCAAAGAGATTTGCATCCCACGACAGCTGTTATCAACTAGCCAGTGCTGGAAAACAGCAGGTAGCACCCCAGACCT-----GCCACTCTCCACGTACTCAGACAACTCATGGCC-CAATCTGAAGATGGCTTT---CCTCTGAATTCTCC-----CACATCTGTGC---CCTGCAGAT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73913482 1157 - 130959383 TTCCAGGCAGGGTCT--ATCTCC-TTTCCCATAGACAGT--ACAGCC-CCTGA-----GGCTCCCCAGAGACCCTCCAAAGTCCTGTGATTGCCCATTCAGGAGTGTAGGACCACCAAAGACTACTCAAGACCAACATGGCTTCAAGGAAGCTTTGGCCTCAGGGTAGCTCCTGCTACCACAAGCACCTTCCTCCCAGGAGCCAGAAGAGCCTTCTCCATCAGCGCAGGTGACCAAGTGGCACACGGCTCACCCGGCCACCATGCTTAGGCCAAAGCAGCCCTGCATGTCCCCCATCAACCTGGCCTCCCCAAAGACCTAGATCCTGTTTCCACATCTCCACCCTC---TACCA-CACATGGACTCTG--CAGTTCCCTG-GGACTTTGCTTTTCTTGGAGAAGAAGAGAGAAAAAGGGAAGCAAATCCT----GAATTGCTCGTT-AGGATTTAAAAACCTCTCCACAGACGGGA-GCTGGGGACAA----------GGTAGGGGAGACAGCGGTAGCAGCACAAGCTGAGGATGGGTCCCCTGCCAGCCTTCCGGGC----------ACGCGGGG-AGCAAAAGGAGAAGCAGAGGCACATGGAAGCAGGGGCTGGGAGATGCTGCCTGGCGCAG-GCTGT---GGGCTTGGCTATTAAAGCCAGAAAAGGCCTGCCTCCTCCTGCCAATAGAGTTATCTTTTAATCCGAACCCCGGATGACACCACCTGGCACCAGTGCAGGAGCAGCTCCTGAGGGCACACGAGTCACGCGGCTGGGCCCCGCGTCTATCCCTTCAGGTCAGGGCTTGCCCTGAGTGCTCCTGA--GGAAGT-GGGCCCCTGCC-----CCCTCCAC---GGCCTGGCTCCTGACAGGCCTGTGCATGCCTGAGAGGGGCAGGCGGGCGGTGAGGAAGTGGAGGAAGCTCCGTGCTGTGCAAGGTCATCAAATGCTAGATGCAAAGA-CCAGAAAGGGAGGGCACTCACCCGAAGTCAGCCACGCCGGGATGGGGCAGCAATCCCAGGATTTTCCTC---------------CTAACCAGATGT----GGCAAAGAGGCTTGCAGCCCAGGACAGCTGTCATCAACTAGCCAGTGCTGGAAAACAGCAGGTAGCACCCCAGACCT-----GCCACTCTCCACGTACTTGGACAACTCATAGCC-CAATCTGAAGATAGCTTT---CCTCTGAATTCTCC-----CAGATCTGTGCCCTCCTGCAAGG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75473742 1157 - 133195287 TTCCAGGCAGGGTCT--ATCTCC-TTTCCCATAGACAGT--ACAGCC-CCTGA-----GGCTCCCCAGAGACCCTCCAAAGTCCTGTGATTGCCCATTCAGGAGTGTAGGACCACCAAAGACTACTCAAGACCAACATGGCTTCAAGGAAGCTTTGGCCTCAGGGTAGCTCCTGCTACCACAAGCACCTTCCTCCCAGGAGCCAGAAGAGCCTTCTCCATCAGCGCAGGTGACCAAGTGGCACACGGCTCACCCGGCCACCATGCTTAGGCCAAAGCAGCCCTGCATGTCCCCCATCAACCTGGCCTCCCCAAAGACCTAGATCCTGTTTCCACATCTCCACCCTC---TACCA-CACATGGACTCTG--CAGTTCCCTG-GGACTTTGCTTTTCTTGGAGAAGAAGAGAGAAAAAGGGAAGCAAATCCT----GAATTGCTCGTT-AGGATTTAAAAACCTCTCCACAGACGGGA-GCTGGGGACAA----------GGTAGGGGAGACAGCAGTAGCAGCACAAGCTGAGGATGGGTCCCCTGCCAGCCTTCCGGGC----------ACGCGGGG-AGCAAAAGGAGAAGCAGAGGCACATGGAAGCAGGGGCTGGGAGATGCTGCCTGGCGCAG-GCTGT---GGGCTTGGCTATTAAAGCCAGAAAAGGCCTGCCTCCTCCTGCCAATAGAGTTATCTTTTAATCCGAACCCCGGATGACACCACCTGGCACCAGTGCAGGAGCAGCTCCTGAGGGCACACGAGTCACGCGGCTGGGCCCCGCGTCTATCCCTTCAGGTCAGGGCTTGCCCTGAGTGCTCCTGA--GGAAGT-GGGCCCCTGCC-----CCCTCCAC---GGCCTGGCTCCTGACAGGCCTGTACATGCCTGAGAGGGGCAGGCGGGCGGTGAGGAAGTGGAGGAAGCTCCGTGCTGTGCAAGGTCATCAAATGCTAGATGCAAAGA-CCAGAAAGGGAGGGCACTCACCCGAAGTCAGCCACGCCGGGATGGGGCAGCAATCCCAGGATTTTCCTC---------------CTAACCAGATGT----GGCAAAGAGGCTTGCAGCCCAGGACAGCTGTCATCAACTAGCCAGTGCTGGAAAACAGCAGGTAGCACCCCAGACCT-----GCCACTCTCCACGTACTTGGACAACTCATAGCC-CAATCTGAAGATAGCTTT---CCTCTGAATTCTCC-----CAGATCTGTGCCCTCCTGCAAGG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73337455 1157 - 125196307 TTCCAGGCAGGGTCT--ATCTCC-TTTCCCATAGACAGT--ACAGCC-CCTGA-----GGCTCCCCAGAGACCCTCCAAAGTCCTGTGATTGCCCATTCAGGAGTGTAGGACCACCAAAGACTACTCAAGACCAACACGGCTTCAAGGAAGCTTTGGCCTCAGGGTAGCTCCTGCTACCACAACCACCTTCCTCCCAGGAGCCAGAAGAGCCTTCTCCATCAGCACAGGTGACCAAGTGGCACACGGCTCACCCGGCCACCATGCTTAGGCCAAAGCAGTCCTGCATGTCCCCCATCAACCTGGCCTCCCCAAAGACCTAGATCCTGTTTCCACATCTCCACACTC---TACTA-CACATGGACTCTG--CAGTTCCCTG-GGACTTCGCTTTTCttggagaagaagagagaaaaagggaagcaAATCCT----GAATTGCTCGTT-AGGATTTAAAAACCTCTCCACAGACGGGA-GCTGGGGACAA----------GGTAGGGGAGACAGCGGTAGCAGCACAAGCTGAGGATGGGTCCCCTGCCAGCCTCCCGGGC----------ACGCAGGG-AGCAAAAGGAGAGGCAGAGGCACATGGGAGCAGGGGCTGGGAGATGCTGCCTGGTGCAG-GCTGT---GGGCTTGGCTATTAAAGCCAGAAAAGGCCTGCCTCCTCCTGCCAATAGAGTTATCTTTTAATCCGAACCCCGGATGACACCACCTGGCACCAGTGCAGGAGCAGCTCCTGAGGGCACACGAGTCACGCGGCTGGGCCCCGCGTCTATCCCTTCAGGTCAGGGCTTGCCCTGAGTGCTCCTGA--GGAAGT-GGGCCCCTGCC-----CCCTCCAC---GGCCTGGCTCCTGACAGGCCTGTGCATGCCTGAGAGGGGCAGGCGGGCGGTGAGGAAGTGGAGGAAGCTCCGTGCTGTGCAAGGTCATCAAATGCTAGATGCAAAGA-CCAGAAAGGGAGGGCACTCACCCGAAGTCAGCCACGCCGGGATGGGGCAGCAATCCCAGGATTTTCCTC---------------CTAACCAGATGT----GGCAAAGAGGcttgcagcccaggacagctgtCATCAACTAGCCAGTGCTGGAAAACAGCAGGTAGCACCCCAGACCT-----GCCACTCTCCACGTGCTTGGACAACTCATAGCC-CAGTCTGAAGATAGCTTT---CCTCTGAATTCTCC-----CAGATCTGTGCCCTCCTGCAGGG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72170095 1157 - 125710982 TTCCAGGCAGGGTCT--ATCTCC-TTTCCCATAGACAGT--ACAGCC-TCTGA-----GGCTCCCCGGAGACCCTCCAAAGTCCTGTGATTGCCCATTCAGGAGTGTAGGACCACCAAAGACTACTCAAGACCAACATGGCTTCAAGGAAGCTTTGGCCTCAGGGTAGCTCCTGCTACCACAAGCACCTTCCTCCCAGGAGCCAGAAGAGCCTTCTCCATCAGCGCAGGTGACCAAGTGGCACACAGCTCACTCGGCCACCATGCTTAGGCCAAAGCAACCCTGCATGTCCCCCATCAACCTGGCCTCCCCAAAGACCTAGATCCTGTTTCCACATCTCCACCCTC---TACCA-CACATGGACTCTG--CAGTTCCCTG-GGACTTTGCTTTTCTTGGAGAAGAAGAGAGAAAAAGGGAAGCAAATCCT----GAATTGCTCGTT-AGGATTTAAAAACCTCTCCACAGATGGGA-GCTGGGGACAA----------GGTAGGGGAGACAGTGGTGGCAGCACAAGCTGAGGATGGGTCTCCTGCCAGCCTCCCGGGC----------ACGCGGGG-AGCAAAAGGAGAGGCAGAGGCACATGGGAGCAGGGGCTGGGAGATGCTGCCTGGCGCAG-GCTGT---GGGCTTGGTTATTAAAGCCAGAAAAGGCCTGCCTCCTCCTGCCAATAGAGTTATCTTTTAATCCGAACCCCGGATGACACCACCTGGCACCAGTGTAGGAGCAGCTCCTGAGGGCACACGAGTCACGCGGCTGGGCCCCGCGTCTATCCCTTCAGGTCAGGGCTTGCCCTGAGTGCTCCTGA--GGAAGT-GGGCCCCTGCC-----CCCTCCAC---GGCCTGGCTCCTGACAGGCCTGTGCATGCCTGAGAGGGGCAGGCGGGCGGTGAGGAAGTGGAGGAAGCTCCGTGCTGTGCAAGGTCATCAAATGCTAGATGCAAAGA-CCAGAAAGGGAGGGCACTCACCCGAAGTCAGCCACACTGGGATGGGGCAGCAATCCCAGGATTTTCCTC---------------CTAACCAGATGT----GGCAAAGAGGCTTGCAGCCCAGGACAGCTGTCATCAACTAGCCAGTGCTGGAAAACAGCAGGTAGCACCCCAGACCT-----GCCACTCTCCACGTACTTGGACAACTCATAGCC-CAGTCTGAAGATAGCTTT---CCTCTGAATTCTCC-----CAGATCTGTGCCTTCCTGCAGGG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75630360 1156 - 121768101 TTCCAGGCAGGGTCT--ATCTCC-TTGTCCACAGACAGC--ACAGCC-CCTGA-----GGCTCCCTAGAGACCCTCCAAACTCCCGTGGTTGCCCATTCAGGAGTGTGGGACCACCTAAGACTACTCAAGACCAGTATGGCTTCAAGGAAGCTCTGGCCTCAGGGTAGCTCCTGCTACCACAAGCACCTTCCTCCCAGGAGCCAGAATGGCCTTCTCCATCAGCGCTGGTGACCAAGTGGCACATGGCTCACCCAGCCACCAAGCTTAGGCCAAAGCAGTCCTGCTTGTCCCCCATCAACCTGGCCTCCCCAAAGATCTGGATTACGTTTCCACATCTCCACCCTC---TACTA-CACATGGACTCTG--CAGTTCCCTG-GGACTTTGCTTTTCTTGGAGAAGGAGAGAGAGAAAGGGAAGCAAATCCT----GAATTGCTCATT-AGGATTTAAAAACCTCTCCACAGAGGGGA-GCTGGGGACAA----------ACTAGGGGAGACAGAGGTGGCAGCACAATTTGAGGATGGGTAACCTGCCAGCCTCCCAGGC----------ACGCAGGG-AGCCAAAGGAGAGGCAGAGGCACCTGGGAGCAGGGGCTGGGAGATGCTGCATGGCGAAG-GCTGT---GGGCCTGGCTATTAAAGCCAGAAAAGGCCTGCCTCCTCCTGCCAATAGAGTTATCTTTTAATCCGAACCCCGGATGACACCACCTGGCACCAGTGCAGGAGCAGCTCCTGAGGGCACACGAGTCACGCGGCTGGGCCCCGCGTCTATCCCTTCAGGTCAGGGCTTGCCCTGAGTGCTCCTGA--GGAAGT-GGGCCCCTGCC-----CCCTCCAC---AGCCTGGCTCCTGACAGGCCTGTGCATGCCTGAGAGGGCCAGGTGGGTGGTGAGGAAGTGGA-GAAGCTCCGTTCTGTGCAAGGTCACCAAATGCAAGATGCAAAGACCCAAAAAGGGAGGGCACTCACCCAAAGTCACCCATGCCAGGACGGGGCAGCAATTCCAGGATTTTCCTG---------------CTACCCAGATGC----AGCAAAGAGGTTTGCAGTCCAGGAAAGCTATTATCAATTAGCCAG-GCTGGAAAAAAGCAGGGAGCACACTGGACCT-----GCCACTCTCCACGTACTTAGACAACTCACAGCC-CAACCTGAAGAGAGCTTT---CCTCTGAATTCTCC-----CAGATCTGTGCCCTCCTGCAAGG i calJac3.chr12 I 167 C 0 s mm10.chr14 24222327 1062 + 124902244 TTCCAGA-ATCCTCT--GTCCCC-TTGCTTCTGGGTACCTGATAATG-GCTGAACCACAGCTCCACTG---CCCTCC--AGTCC--TGACTGCCCACTGAAGGTCTAGGAGCCACCCACG---------------CACAACTCCAAGCAG----------CTGCACAGCTGCTGCTGAAACAAGCACCTTCCCTCCCTGA--CAGGAGAGCCTCCTCCACCAG-GGAGGACACTGTCTGCAGCGTG-------TGACCATCAGACCTGGCCTGGCCTAG---TGGAGGTGGCCCA------GGACTTCCCTGCAG--------------CCCACACTGCCATTCTCCATCATCA-CACTTGGAAGGTAGTTAGCTCCCTGTGGCCTTTGCTTTACCTGGA-ATGAAGCGGGAAA---GAATGCCAGTCCTGTTGGAAGTGCTCCCT-AGGATTAAAGAACTCCTCTGCAAAGAGGCTGATAAAaacaacaacaacaacaacaaGGGAGGCAG--GTTGTATCAGCATCTGGAGACGGGCTGGCTTACTGGCTTCTAGGTGGAGCATGGGGGGTGGGG-GGTGGAGGGCAAGGAAGGAGCCAGAGGGAGGGGGAGCAGAACAGGGCTGAACTCTAGAGAGCTGCCCAGGGCTTGCTTACTAAAGCTTGTTTCAGC------CCTCCTGC------AGTTATCTTTTAATCC-AACCCCGGAAGACACCAGCTGGCATCAGTGCAGAAGCAACTCCCCAGGGCACATGAGTCACCAGGCTGGACTCCAGGTCTGTTCCTCGGGGCTGGGGACCTTGCTGTATGTACCTGA--GGATGT-GGTCCCTGG-------CCCTCTAA---GGACTGGCTCCTG--------------------------------------GAGTCACTGGA----------------GCAGGATCACTGGAGGCTAAACACCAAGACCTGAAGATGGAA-----------------ACCCAGGAAGGGTCTGAGTAGCCGTCCTAAGATTGTCCTCTTGGAGGTCCACTGGCTGCTTGGATTTTACAGGCAGACAAGCTTGGCAGGATGGAGAACCCTGACTGACTAGAGAG---AGGGAAGCAGTATGGGTGGCCACTGTCCC-----ACTGAAGTCCCTGCAATTATCCAGGACACAACAGCAACC-----ATCTCTTTGGCTCACTGAGATACCCCTGTTCACATCAGTGGGCTACTACACGG i mm10.chr14 C 0 I 61 s canFam3.chr4 27784326 1029 + 88276631 -GCGGGGCAGGCACTTCATCTCCACTGCCCACAGGCAGT--ACGGCCGTCTGG-----GGTTGCCCAGAGAGCCTCAGGAGCCCTGTGACCACCAACTCAGGG---------CCCCCGAGACCACTCACAGCCATGCCAGCTCGGAAGGAGC--------------AACTACC----CCCCAGACTCACAGCTCCTGAGGAACCGAACAGCCTCCTGCATCAGC----------------TACACCG----------CAGCGCAGCTGGGCTGAGCTGGGCCCGCA----CCCCTCCACCCGCCCCCTCCCACCAGCCTGGACTCCGTTTCCTCGCCTCTACTCTG---CCCCAGCACACTTCACCTG--CAGCTCCAGG-GGACTTTGCCTTCCTCAGACAGGAAGGGAGGAAAAGGAAAACGAATCCT-GTGGAATTGCTCATTGGGGACTTTACAACCTGTCCCCAGAGGAGA--CAGGGGGCGG----------AG-AGGCCATCTGAGGAGGGCAGCCCGGCCGCAGGAGGGA----------------CAGGA----------GCGGAGGGCAGCGAGCGGAGAGGCCGAGGCGCCCAGCAGCAGT-GCTGGGAGCACCTGCCCGGGGCCC-GCCAC----GGCCTGCTGGTTAAAGGCAGCAAAGGGCCG-CTCCTCCTGCCAACGGAGTTATCTTTTAATCCAACCCCCGGATGACACCACCTGGCACGGGCGCAGGAGCAGCTCCCGAGGGCGCACGAGTCACGAGGGCGGGCCCCGGGTCTCTCCTTTCGGGCTGAGGCTTGC-CTGGGCGCCCGCGGGCGGACGCAGGGCCCCTGCCCCGCACCCCCCACTCAGGCCCCGCCGTGGTCAAGCCTGCGCTCGCCTGCGCTCGCCAG--CGGCCGCGGGGAAG-------GGCCACGGG----GAAGGGCCGCCAGGCGCCCCCTGCCAAGG-CCGGG---------------CCTCAGGCC--TCGGGCCAGGGCGAGGCGGCGGCCTGGGGGCTTCT------------------GTGGCCGGACGC----GGC--------------CCCAGGACAGCTGCCATC---------------GGGGGTGGCGGGCGGCAGCC---ACCCTGTGGGCCGCTCTCAGGGCCTGCGGGCA---CTCGGCA-CATGGTGGTGACCCCGGA---CTCACGGGCTCACT-----C------GTGTccccgcgcgagg i canFam3.chr4 C 0 C 0 a score=54850.000000 s hg38.chr10_KI270825v1_alt 137774 22 + 188315 CTTGGTTTCTGAGGTCCCATCC- s panTro4.chr10 76515348 22 + 133524379 CTTGGTTTCTGAGGTCCCATCC- i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76184462 22 - 133410057 CTTGGTTTCTGAGGTCCCGTCG- i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35119449 21 + 104879549 CCC-GTTTCTGAGGTCCCGTCA- i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73914639 22 - 130959383 CTTGGTTTCTGAGGTCCCATCA- i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75474899 22 - 133195287 CTTGGTTTCTGAGGTCCCATCA- i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73338612 22 - 125196307 CTTGGTTTCTGAGGTACCATCA- i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72171252 22 - 125710982 CTTGGTTTCTGAGGTCCCATCA- i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75631516 22 - 121768101 CTTGGTTTCTGAGGTCCTGTCA- i calJac3.chr12 C 0 C 0 s canFam3.chr4 27785355 16 + 88276631 -------gccgaggggccgggcc i canFam3.chr4 C 0 C 0 e mm10.chr14 24223389 61 + 124902244 I a score=757879.000000 s hg38.chr10_KI270825v1_alt 137796 227 + 188315 GCCTTGAAGTTGGCAAGGGCTAGGGTAG-CATGTAACCTATCTCCCTAGTAAGGATGGCACTGACTCTGCTGT------GGcagcatccaggccaggcagccatccaggccctcccagactgggggagctcagcacctccagaggcagccacctcaccacagaccaac--acaccctgc-tgcagcgttcttccttgtgggcaatggaaatctgccAGCAGGAACTGGTAGCAGAAA s panTro4.chr10 76515370 227 + 133524379 GCCTTGAAGTTGGCAAGGGCTAGGGTAG-CATGTAACCTATCTCCCTAGTAAGGATGGCACTGACTCTGCTGT------GGCAGCATCCAGGCCAGGCAGCCATCCAGGCCCTCCCAGACTAGGGGAGCTCAGCACCTCCAGAGGCAGCCACCTCACCACAGACCAAC--ACACCCTGC-TGCAGCGTTCTTCCTTGTGGGCAATGGAAATCTGCCAGCAGGAACTGGTAGCAGAAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76184484 227 - 133410057 GCCTTGAAGTTGGCAAGGGCTAAGATAG-CATGTAACCTGTCTCCCTAGTAAGGATGGCACTGACTCTGCTGT------GGCAGCATCCAGGCCAGGCAGCCATCCAGGCCCTCCCAGACTGGGGGAGCTCAGCACCTCCAGAGGCAGCCACCTCACCGCAGACCAAC--ACACCCTGC-TGCAGCATTCTTCCTTGCGGGCAATGGAAATCTGCCAGCAGGAACTGGTAGCAGAAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35119470 227 + 104879549 GCCTTGAAGTTGGCAAGGGCTAGGGTAG-CATGTAGCCTGTCTCCCTAGTAAGGATGGCACTGACTCTGCTGT------GGCAGCATCCAGGCCAGGCAGCCATCCAGGCCCTCCCAGACTGGGGGAGCTCAGCACCTCCAGAGGCAGCCACCTCACCACAGACCAAC--ACACCCTGC-TGCAGCGTTCTTCCTTGTGGGCAATGGAAATCTGCCAGCAGGAACTGGTAGCAGAAA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73914661 226 - 130959383 CCCTTGAGGTTGGCAAGGGTTAGGATAG-CATGTAACCTGTGTCCCTAGCAAGGATGGCACTGACTCTACTAT------GGcagcacccaggccaggcagccatccaggccctcccagact-ggggagctcagcacctccagaggcagccacctcaccacagaccaac--actccttgc-tgtagcgttcttccttgtgggcaatggaaatctgccAGCAGGAACTGGTAGCAGAAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75474921 226 - 133195287 CCCTTGAGGTTGGCAAGGGTTAGGATAG-CATGTAACCTGTGTCCCTAGCAAGGATGGCACTGACTCTACTAT------GGcagcacccaggccaggcagccatccaggccctcccagact-ggggagctcagcacctccagaggcagccacctcaccacagaccaac--actccttgc-tgtagcgttcttccttgtgggcaatggaaatctgccAGCAGGAACTGGTAGCAGAAA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73338634 226 - 125196307 GCCTTGAGGTTGGCAAGGGTTAGGATAG-CATGTAACCTGTCTCCCTAGCAAGGATGGCACTGACTCTGCTAT------GGCAGCATCCAGGCCAGGCAGCCATCCAGGCCCTCCCAGACT-GGGGAGCTCAGCACCTCCAGAGGCAGCCACCTCACCACAGACCAAC--ACTCCTTGC-TGTAGCGTTCTTCCTTGTGGGCAATGGAAATCTGCCAGCAGGAACTGGTAGCAGAAA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72171274 226 - 125710982 GCCTTGAGGTTGGCAAGGGTTAGGATAG-CATGTAACCTGTCTCCCTAGCAAGGATGGCACTGACTCTGCTAT------GGCAGCACCCAGGCCAGGCAGCCATCTAGGCCCTCCCAGACT-ggggagctcagcacctccagaggcagccacctcaccacagaccaac--actccttgc-tgtagcgttcttccatgtgggcaatggaaatctgccAGCAGGAACTGGTAGCAGAAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75631538 207 - 121768101 GCCTTGAGGTTGCCAAGGGCTAGGGCAG-CATGTAACCTGTTTCCCTAGCAAGGAAGGCACTGACTCTGCTCT------TGCAGCATCCAGGCCAGGCAGCCATCCAGGCCCC--------------------CGTCTCCAGAGGCAGCCACCCCACCGTGGACCAGC--ACTCCCTGC-CGCAGCGTTCTTCCTTGTGGGCAATGGAAATCTGCCAGCAGGAACTGATTACAGAAA i calJac3.chr12 C 0 C 0 s mm10.chr14 24223450 228 + 124902244 GTCTTGAGATTAACAAGGATGCAGTCAG--ATGTAACCCATCACCTTAGCAACACAGCTGCTGGCTCCCCTCTCTAATAGCTAGGA--CAGGACAGAAAGCCACCCAGGCCTTTCCAGCC--GAGGAGCTTGAAACTTCCAGAGGTAGCAGTCCCACCAATGACCAGCTAGCTCCATCA-TGTGTCG--CTGCTTTGCAGGTCACAGAAATCTGCCAGAAGAAACTGGTGGCTAAAA i mm10.chr14 I 61 I 125 s canFam3.chr4 27785371 217 + 88276631 -gcccgggAAGGACGCGGGGAAGGAGGGGCGGGGAGGCGAGCGCCTCAACGGGACTCGC-----CTTCCTTCC------CGCAGCCGCGCACCCAGGCTGCCGTCC-GGCCTCGCCAGGCT--CGGGGCCCGCGGCCTCCAGAGGCAACCGGCCCGCCGCTGACGG----CCTCCGTGCGCCCGGCGCTCTTCCTCGGGGGCAGCCCACG-CGGCGCGGCGGGCCCGAGAGCCAAAA i canFam3.chr4 C 0 C 0 a score=1607585.000000 s hg38.chr10_KI270825v1_alt 138023 463 + 188315 ACTCCCCAAAGC--------------CTG-CTCCAAT--------------------------------------------------------------TCT-CCACCCcagtacaatgggcgtgccctcaggattccaacagccaagggcaaaatcccgact-cactggcttgggactctgggcaagtgacttactctctctatgcctcagttccctcatctgtaaaatgaggagagtagtggcctt-catcttagagttgc-----------tgggatgagat----gatccttgcaacctcccggggca-caca-t---gagtggtcaacaaatgctttctatGGCTA----------------CACTACAATG------CACAGTTCCACAGGCTCAAGGCCCAGCTTTCTGCCCCTCTCCTCATACTCATTCCACTTTCTCATGACCAGACTTGTGCTCAGCAAGTGTCCACTCCTATAGGTTCGCTCAGGGGTAGCTGGCTCACCAGGGACACATTTTAAACCCTGGCCTCTTCCTCCAAAACTTCAGCTCAGAGCCTTGGCAAGCCATCCCTGCCGCC s panTro4.chr10 76515597 463 + 133524379 ACTCCCCAAAGC--------------CTG-CTCCAAT--------------------------------------------------------------TCT-CCACCCcagtacaatgggcgtgccctcaggattccaacagccaagggcaaaatcccgact-cactggcttgggactctgggcaagtgacttattctctctgtgcctcagttccctcatctgtaaaatgaggagagtagtggcctt-catcttagagttgc-----------tgggatgagat----gatccttgcaatctcccggggca-caca-t---gagtggtcaacaaatgctttctatGGCTA----------------CACTACAATG------CACAGTTCCACAGGCTCAAGGCCCAGCTTTCTGCCCCTCTCCTCATACTCATTCCACTTTCTCATGACCAGACTTGTGCTCAGCAAGTGTCCACTCCTATAGGTTCGCTCAGGGGTAGCTGGCTCACCAGGGACACATTTTAAAACCTGGCCTCTTCCTCCAAAACTTCAGCTCAGAGCCTTGGCAAGCCATCCCTGCCGCC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76184711 472 - 133410057 ACTCCCCAAAGC--------------CTG-CTCCAAT--------------------------------------------------------------TCT-CCACCCCagcacagtgggcgtgccctcaggattccaacagccaagggcaaaatcccgact-cactggcttgggactctgggcaagtgagttactctctctgcgcctcagttccctcatctgtaaaatgaggagagtagtggcctt-catcttagagttgctgggatgagggtgggatgagat----gatccttgcaacctcccagggct-caca-c---aagtggtcaacaaatgc-ttctatGGCTA----------------CACTACAACG------CACAGTTCCACAGGCTC-AGGCCCAGCTTTCTGCCCCTCTCCTCACACTCATCCCACTTTCTCATGACCAGACTTGTGCTCAGCAAGTGTCCGATCCTATAGGTTCGCTCAGGGGTAGCTGGCTCACCAGGGACACATTTTAAACCCTGGCCTCTCCCTCCAAAACTTCAGCTCAGAGCCCTGGCAAGCCATCCCTGCCGCC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35119697 473 + 104879549 ACTCCCCAAAGC--------------CTG-CTGCAAT--------------------------------------------------------------TCT-CCACCCCagcacagtgggcgtgccctcaggattccaacagccaagggcaaaatcccgact-cactggcttgggactctgggcaagtgacttattctctctgtgcctcagttccctcatctgtaaaatgaggagagtagtggcctt-catcttagagttgctgggatgagggcgggatgagat----gatccttgcaacctcccggggca-caca-c---gagtggtcaacaaatgctttctatGGCTA----------------CACTACAATG------CACAGTTCCACAGGCTC-GGGCCCAGCTTTCTGCCCCTCTCCTAACACTCATCCCACTTTCTCATGACCAGACTTGTGCTCAGCAAGTGTCCAATCCTATAGGTTTGCTCAGGGGTAGCTGGCTCACCAGGGACACATTTTAAACTCTGGCCTCTTCCTCCAAAACTTCAGCTCAGAGCCCTGGCAAGCCATCCCTGCTGCC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73914887 472 - 130959383 ACTCCCCAAAGC--------------CTG-CTCCAAT--------------------------------------------------------------TCC-CCACCCCagcacagtgggcgtgctctcaggattccaacagccaagggcaaaatcccgact-cactggcttgggactctgggcaagtgacttactctctctgtgcctcatttccctcgtctgtaaaatggggagagtagtggattt-catcttagagttgttgggatgagggtgggatgagat----gatccttgcaacctccca-ggca-ccca-c---aagtggtcaacaaatgctttctatGGCTA----------------CACTACAACA------CACAGTTCCACAGGCCC-AGGCTCAGCTTTCTGCCCCTCTACTAACACTCATCCCACTTTCTTATGACCAGACTTGTGCTCAGCAAGCGTCCAATCCCATAGGTTCGCTCAGGGGTAGCTGGCTCACCAGGGACACATTTTAAACCCTGGCCTCTTCCTCCAAAACTTCAGCTCAGAGCCCTGGCAAGCCATTCCCGCAGCC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75475147 472 - 133195287 ACTCCCCAAAGC--------------CTG-CTCCAAT--------------------------------------------------------------TCC-CCACCCCagcacagtgggcgtgctctcaggattccaacagccaagggcaaaatcccgact-cactggcttgggactctgggcaagtgacttactctctctgtgcctcatttccctcgtctgtaaaatggggagagtagtggattt-catcttagagttgctgggatgagggtgggatgagat----gatccttgcaacctccca-ggca-caca-c---aagtggtcaacaaatgctTTCTATGGCTA----------------CACTACAACA------CACAGTTCCACAGGCTC-AGGTTCAGCTTTCTGCCCCTCTACTAACACTCATCCCACTTTCTCATGACCAGACTTGTGCTCAGCAAGCGTCCAATCCCATAGGTTCGCTCAGGGGTAGCTGGCTCACCAGGGACACATTTTAAACCCTGGCCTCTTCCTCCAAAACTTCAGCTCAGAGCCCTGGCAAGCCATTCCCGCAGCC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73338860 472 - 125196307 ACTCCCCAAAGC--------------CTG-CTCCAAT--------------------------------------------------------------TCC-CCACCCCAGCACAGTGGGCGTGCTCTCAGGATTCCAACAGCCAAGGGCAAAATCCCGACT-CACTGGCTTGGGACTCTGGGCAAGTGACTtactctctctgtgcctcatttccctcgtctgtaaaatggggagagtaGTGGATTT-CATCTTAGGGTTGCTGGGATGAGGGTGGGATGAGAT----GATCCTTGCAACCTCCCA-GGCA-CACA-C---AAGTGGTCAACAAATGCTTTCTATGGCTA----------------CACTACAACA------CACAGTTCCACAGGCTC-AGGCTCAGCTTTCTGCCCCTCTACTAACACTCATCCCACTTTCTCATGACCAGACTTGTGCTCAGCAAGCGTCCAATCCCATAGGTTCGCTCAGGGGTAGCTGGCTCACCAGGGACACATTTTAAACCCTGGCCTCTTCCTCCAAAACTTCAGCTCAGAGCCCTGGCAAGCCATCCCCGCAGCC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72171500 472 - 125710982 ACTCCCCAAAGC--------------CTG-CTCCAAT--------------------------------------------------------------TCC-CCACCCCagcacagtgggcgtgctctcaggattccaacagccaagggcaaaatcccgact-cactggcttgggactctgggcaagtgacttactctctctgtgcctcatttccctcgtctgtaaaatggggagagtagtggattt-catcttagagttgctgggatgagggtgggatgagat----gatccttgcaacctccca-ggca-caca-c---aagtggtcaacaaatgctTTCTATGGCTA----------------CACTACAACA------CATAGTTCCAAAGGCTC-AGGCTCAGCTTTCTGCCCCTCTACTAACACACGTCCCACTTTCTCATGACCAGACTTGTGCTCAGCAAGCGTCCAATCCCATAGGTTCGCTCAGGGGTAGCTGGCTCACCAGGGACACATTTTAAACCCTGGCCTCTTCCTCCAAAACTTCAGCTCAGAGCCCTGGCAAGCCATCCCCGCAGCC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75631745 468 - 121768101 ACTCTCCAAAGC--------------CTG-CTCCAAT--------------------------------------------------------------TCC-CCACCCCAGCACAGTGGGCATGCCCTCAGGATTCCAACAGCTAAAGGCAAAATCCCG-----actggcttgggactctgggcaagtgacttattctctctgtgcctcagttccctcatctgtaaaatggggagagtagtggccgt-catcttagggttgctgggatgaggatgggatgtgat----gatccttgcaaactcccc-agca-caca-c---aagcggtcaacaaacgctttctatGGCTA----------------CACCACAACG------CCTGGTTCCACAGGCCC-AGGCTCAGCTTTCTGCCCCTCTCCTAACACTCCTCCCACTTTCTCATGACCACACTTGTGCTCAGCAAGTGTCCAATCCCATAGGTTCGCTCAGAGGTAGCTGGCTCACCAGGGACACATTTTAAACCCTGGCCTCTTCCTCCAAAACTTCAGCTCAGAGCCCTGGCAAGCCATCCCTGCAGCC i calJac3.chr12 C 0 C 0 s mm10.chr14 24223803 524 + 124902244 acccgccaaagctacaaagtgaggcactgtctccaacaaaAGAAGACAGAAGGGGAAAAAAATCAACTCCAAACTTCACACTACCCCCAAGTAGTTCAATTC-CCACCCCAGCTCAATGGG-GTGCTCTT--GAACCCAGGAGCCAGAAAACAAAGCATGACTCCACCAGCACGGGG---TGAGCAAATGCCTTGG--AGCctggacctcagt--ccccagctgtaaagctggaacagta-cagatat-ctctctagcaacgctag---------gggatttaatATCGGGTCCACATGAGTTCCCT-GGCAGCACAGT---GAGTG------------TTGCCATGATCC----------------AACCATACCAGCATGCCCTAGGTGCACAGGTTC-TGGCCCAGCTTTCTACCCA-CTGATGACATTCGCCTTTCTTTGTCATCGCTGGATTCCCACTCAGCAAGTATCCAGCTCTGTGGGCTACTTCAAGAGGAACTGGCTTACCAGGGATACATATCTAACCCAGG-CTGTCTCACCAAAGCCTCTG-TCAGGGCTCTAGCA---CTCCCCAGCAGCC i mm10.chr14 I 125 I 678 s canFam3.chr4 27785588 456 + 88276631 ------------------------------CCCCAAG--------------------------------------------------------------TCTAACAGCCCCTCTCGGCAGGCGTGCCCCCTGAGCGCCAACCGC-AGGGGTGAAACCCTGact-cgccagcttgggactctgggcaagtaaccc-ccctccccgtgcctccgtcccctctcccataaa-cggggacagtaacagccccgcatctcctggtcgt---gatgagCCC----CGAGAC----G-TCAACATAAGCTCCCT-TGCA-CACA-CCAAAAGTGGTCAGTAAGTGTGCACTAAGGCTGCCGTCACGCCAACCATCGCCATCATG------GCCTGTTCCACAGGCTC-CAGCCCAACCTTTGG-----------ACATGCATCCCCCTTTCTCCTGACCAGACCCGAGCCCCACAAGTATTCAGTTCTGTAGCCTCCCTTAGGGTTAACCAGCTCCCTGGGAGCACATCTCAACATCTACCCTCTCCTGGCAAAACCACTGCCCAGCGCTCAGGCAGGCCATCCCAGCAGCC i canFam3.chr4 C 0 C 0 a score=308049.000000 s hg38.chr10_KI270825v1_alt 138486 95 + 188315 CACTGGAGATGGCTGACGAGAAAACCAGAAAGAGACCATGAAAGAGGAAGGCTCTTCTCACTCCTCAC----TCATCCT----------------TATCTTGGACC---AGTATCCTC s panTro4.chr10 76516060 95 + 133524379 CACCGGAGATGGCTGACGAGAAATCCAGCAAGAGACCATGAAAGAGGAAGGCTCTTCTCACTCCTCAC----TCATCCT----------------TATCTTGGACC---AGTATCCTC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76185183 95 - 133410057 CATCGGAGATGGCTGACGAGAAATCCAGCAAGAGACCGTGAAAGAGGAAGGCTCTTCTCACTCCTCAC----TCATCCT----------------TATCTTGGACC---AGTATCCTC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35120170 95 + 104879549 CACCGGATATGGCTGACGAGAAATCCAGCAAGAGACCATGAAAGAGGAAGGCTCTTCTCACTCCTCAC----TCATCCT----------------TATCTTGGACC---AGTATCCTC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73915359 95 - 130959383 CACCGGAGATGGCTGAGGAGAAATCCAGCAACAGACCATGAAAGAGGAAGGCTCTTCTCACTCCTCAC----TCATCCT----------------CATCTTGGCCT---AGTATCCTC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75475619 95 - 133195287 CACCGGAGATGGCTGAGGAGAAATCCAGCAACAGACCATGAAAGAGGAAGGCTCTTCTCACTCCTCAC----TCATCCT----------------CATCTTGGCCT---AGTATCCTC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73339332 95 - 125196307 CACCAGAGATGGCTGAGGAGAAATCCAGCAAGAGACCATGAAAGAGGAAGGCTCTTCTCACTCCTCAC----TCATCCT----------------CATCTTGGCCT---AGTATCCTC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72171972 95 - 125710982 CACCGGAGATGGCTGAGGAGAAATCCAGCAAGAGACCATGAAAGAGGAAGGCTCTTCTCACTCCTCAC----TCATCCT----------------CGTCTTGGCCT---AGTATCCTC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75632213 95 - 121768101 CACTGGAGATGGCTGGTGAGAAATCCAGCAAGAGACCACGAAAGAGGAAGGCTCTTCTGGCTCCTCAC----TCATCCT----------------AGTCTTGGCCC---AGTATCCTC i calJac3.chr12 C 0 C 0 s canFam3.chr4 27786044 116 + 88276631 CACTGGAGCTGACGGACGCGACATGCAACAGGGGACCATG--TGGGCAGGATCCCTCTCACCCCTCCTGGCGTCAGCCTGTGTCTCTAGCCTCACCACCCCAGACCCCAAGTATCCTT i canFam3.chr4 C 0 I 30 e mm10.chr14 24224327 678 + 124902244 I a score=31085.000000 s hg38.chr10_KI270825v1_alt 138581 11 + 188315 CACACA-AC-------------------------------------------------------ACC s panTro4.chr10 76516155 11 + 133524379 CACACA-AC-------------------------------------------------------ACC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76185278 11 - 133410057 CACACA-AC-------------------------------------------------------ACC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35120265 11 + 104879549 CACACA-AC-------------------------------------------------------ACC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73915454 11 - 130959383 CACACA-AC-------------------------------------------------------ACC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75475714 11 - 133195287 CACACA-AC-------------------------------------------------------ACC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73339427 11 - 125196307 CACACA-AC-------------------------------------------------------ACC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72172067 11 - 125710982 CACACA-AC-------------------------------------------------------ACC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75632308 11 - 121768101 CACACA-AC-------------------------------------------------------ACC i calJac3.chr12 C 0 C 0 s mm10.chr14 24225005 12 + 124902244 cacacacac-------------------------------------------------------aca i mm10.chr14 I 678 C 0 s canFam3.chr4 27786190 66 + 88276631 CACACA-ACTgggacgcctgggtggctcagtcggttaaacatctgccttcagctcagctcatgaacc i canFam3.chr4 I 30 I 120 a score=1968784.000000 s hg38.chr10_KI270825v1_alt 138592 581 + 188315 AACACCCAA--------ACATAACAGCAAATGGATATAATCTTATCAATTTCATCCTCCACAACCTTCTACGGCTCCCTCTGGC------------CTA-------AAGTCAAAAAGCCTTACCCCAGACTTTAAAAGGAagagataaacacttagtgaacatttg---actatgtgtcaagttctctgctctacagtg--ta-------tatatattatatcatttaataactccctctaaaattcgtcttattgcttgcatcttacaggtgaggaagctgaggctccaagacactaggcaactt-acctaagcgtcacagctcagaaa---cagaagcagattt-ggaggccagatctgGGAGGCCACAAGGCTGGGTCCTTGGCACAgcctctacctcctctccaggtcatctcctgcaacccctccctgacccagccactgtccagtcaccacggtgcccatggtcacctggcacacctggctgtgtcctacattaatgcatatcctcacgcttctgcttctc---ctgcctggaacgcacctacctatcacc-taatgaacttctactcagcccagaaagctctgctctcaagttatctccttcaggagacagaccttcacccc s panTro4.chr10 76516166 581 + 133524379 AACACCCAA--------ACATAACAGCAGATGGATATAATCTTATCAATTTCATCCTCCACAACCTTCTATGGCTCCCTCTGGC------------CTA-------AAGTCAAAAAGCCTTACCCCAGACTTTAAAAGGAagagataaacacttagtgaacatttg---actatgtgtcaagttctctgctctacagtg--ta-------tatatattatatcatttaataactccctctaaagttcatcttattgcttgcatcttacaggtgaggaagctgaagctccaagacactaggcaactt-acctaagcgtcacagctcagaaa---cagaagcagattt-ggaggccagatctgGGAGGCCACAAGGCTGGGTCCTTGGCACAgcctctacctcctctccaggtcatctcctgcaacccctccctgacccagccactgtccagtcaccatggtgcccatggtcacctggcacacctggctgtgtcctacattaatgcatatcctcacgcttctgcttctc---ctgcctggaacgcacctacctatcacc-taatgaacttctactcagcccagaaagctctgctctcaagttatctccttcaggagacagaccttcacccc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76185289 581 - 133410057 AACACCCAA--------ACATAACAGCACATGGATATAATCTTATCAATTTCGTCCTTCACAACCTTCTACGGCTCCCTCTGGC------------CTA-------AAGTCAAAAAGCCTTACCCCAGACTTTAAAGGGAagagataaacacttagtgaacatttg---actatgtgtcgagttctctgctctatactg--ta-------tatatattatatcatttaataactccctctaaagttcgtcttattacttgcatcttacaggtgaggaagctgaggctccaagacactaggcaactt-acctaagcgtcacagctcagaag---cagaagcagattt-ggaggccagatctgGGAGGTCACAAGGCTGGGTCCTTGGCACAgcctctacctcctctccagctcatctcctgcaacccctccctgacccagccactgtccagtcaccacggtgcccatggtcacctggcacacctggctgtgtcctacattactgcatatcctcacgcttctgcttctc---ctgcctggaacgcacctacctatcacc-taatgaacttctactaagcccagaaagctctgctctcaagttatctccttcaggagacagaccttcacccc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35120276 579 + 104879549 AACACCCAA--------ACATAACAGCAAATGGATATAATCTTATCAATTTCGTCCTCCGCAACCTTCTACGGCTCCCTCTGGC------------CTA-------AAGTCAAAAAGCCTTATCCCAGACTTTAAAGGGAagagataaacacttggtgaacatctg---actatgtgtcgagttctctgctctatactgtata-------tatatattatatcatttaataactccccctaaagttcgtcttattacttgcatctcacaggtgaggaagctgaggctccaagacactaggcaactt-acctaagcgtcacagctcagaag---cagaagcagattt-ggaggccagatctgggaggccacaaggctgggtccttggcacagcctccacttcctctccagctcatctcctgcaacccatccctgacccagccactgtccagtcaccacggtgcccatggtcgcctggcacacctggctgtgtcctacattactgcatatcctcacactcctgcgtctc---ctgcctgaaacgcacctacctatcatc-taatgaacttctactaagcccagaaagttctgctctcaagttatctccttcaggagacagaccttca---- i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73915465 580 - 130959383 AGCACCCAA--------GCATAACAGCAAATAGATATAATCTTATCAATTTCGTGCTCCACAACCTTCTCTGGCTCCCTCTGGC------------CTA-------AAGTCAAAAAGCCTTACCCCAGCCTTTAAAGGGAGGAGATAAAcactttgtgaacatctg---actatgtgttgagttctctgctctacactg--ta-------tatgtattatatcatttaataactccctcttaagtttgtcttattacttgcatcttacaagtgaggaagctgaggctccaagagactaggcaactt-acctaagcctcacagctcaaaag---cagaagcagattt-ggaggccagatccgGGAGGCCACAAGGCTGGGTCCTTGGCACAgcctccacctcctctccagctcatctcctgcaactcctccctgatccagccact-tccagtcaccacggtgcccatggtcacctggcacacctggctgtgtcctacattactgcatatcctcacgcttctgctcctc---ctgcctggaatgcacctacccgtcccc-taatggacttctactaagcccagaaagctccactctcaagttatctccttcaggagacggaccttcacccc i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75475725 580 - 133195287 AGCACCCAA--------GCATAACAGCAAATAGATATAATCTTATCAATTTCGTGCTCCACAACCTTCTCTGGCTCCCTCTGGC------------CTA-------AAGTCAAAAAGCCTTACCCCAGCCTTTAAAGGGAGGAGATAAAcactttgtgaacatctg---actatgtgttgagttctctgctctacactg--ta-------tatgtattatatcatttaataactccctcttaagtttgtcttattacttgcatcttacaagtgaggaagctgaggctccaagagactaggcaactt-acctaagcctcacagctcaaaag---cagaagcagattt-ggaggccagatccgggaggccacaaggctgggtccttggcacagcctccacctcctctccagctcatctcctgcaactcctccctgatccagccact-tccagtcaccacggtgcccatggtcacctggcacacctggctgtgtcctacattactgcatatcctcacgcttctgctcctc---ctgcctggaatgcacctacccgtcccc-taatggacttctactaagcccagaaagctccattctcaagttatctccttcaggagatggaccttcacccc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73339438 579 - 125196307 AGCACCCAA--------GCATAACAGCAAATAGATATAATCTTATCAATTTCGTGCTCCACAACCTTCTCTGGCTCCCTCTGGC------------CTA-------AAGTCAAAAAGCCTTACCCCAGCCTTTAAAGGGAGGAGATAAACACTTTGTGAACAT-------CTATGTGTCGAGTTCTCTGCTCTACactg--ta-------tatgtattatatcatTTAATAACTCCCTCTTAAGTTTGTCTTACTACTTGCATCTTAcaagtgaggaagctgaggctccaAGAGACTAGGCAACTT-ACCTAAGCCTCACAGCTCAAAAG---CAGAAGCAGATTT-GGAGGCCAGATCCGGGAGGCCACAAGGCTGGGTCCTCggcacagcctccacctcctctccagctCATCTCCTGCAACTCCTCTCTGATCCAGCCACT-TCCAGTTACCACGGTGCCCATGGTCACCTGGCACACCTGGCTGTGTCCTACATTACTGCATATCCTCACGCTTCTGCTCCTTCTGCTGCCTGGAATGCACCTACCCGTCACC-TAATGGACTTCTACTAAGCCCAGAAAGCTCCGTTCTCAAGTTATCTCCTTCAGGAGACGGACCTTCACCCC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72172078 580 - 125710982 AGCACCCAA--------GCATAACAGCAAATAGATATAATCTTATCAATTTCGTGCTCCACAACCTTCTCTGGCTCCCTCTGGC------------CTA-------AAGTCAAAAAGCCTTACCCCAGCCTTTAAAGGGAGGAGATAAAcactttgtgaacatctg---actatgtgtcgagttctctgctctacactg--ta-------tatatattatatcatttaataactccctcttaagttcgtcttattacttgcatattacaagtgaggaagctgaggctccaagagactaggcaactt-acctaagcctcacagctcaaaag---cagaagcagattt-ggaggccagatccgGGAGGCCACAAGGCTGGGTCCTCGGCACAGCctccacctcctctccagctcatctcctgcaactcctccctgacccagccact-tccagtcaccatggtgcccacggtgacctggcacacctggctgtgtcctacattactgcatatcctcacgcttctgctcctc---ctgcctggaatgcacctacccatcacc-taatggacttctactaagcccagaaagctccgttctcaagttatctccttcaggagacggaccttcacccc i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75632319 583 - 121768101 AACACCCAA--------GCTTAACAGCAAATGGATATAATCTTATCAATTTCATGCTCCACAACCTTCTATGGCTCCCTGTGGC------------CTA-------AAGTCAAAAAGTCTTACCCCAGCCTTAAAAGGGATAAGATAAAcacttattgagcatctgtgctcagtaagtcaagttatctgctctatggtg--ta-------tatgtattctatcatttaataattccctctaaagttcattttattacttgcatcttacaggtgaggaagctgaggctccaagacactaggcaacct-gcctaagcctcacagctcagaag---cagaagcagattt-ggagaccagatctgGGAGGCCACAAGGCTGGGTCCTCAGCACAgcctccgcctactctccagctcatctcctgcaacccctctctgacccagctactatccagttatcacggcacccatggtcacctggcacacctggctgtgtcctacattactgcacattctcacacttctgctcc-c---ctgcctagaatacacttacccatcacc-tagcagacttctactcagcccacaaagctctgctctcaagttacctccttcaggagacggaccttcacccc i calJac3.chr12 C 0 C 0 s mm10.chr14 24225017 451 + 124902244 cacacCGAAAAGAGATGGCACAATACGAAAGAGATGGCAAACTATCAAACTCCTCTTCCACAGCCTGCCATAGCTCCCTCTGGAATACTAAGTAGGATA-------AAGTTAACAAGTCTCA-CCAAGCATTTGCAGGCAAAGG-----CACCTGATGAGCATCTG---ACTG------------CCTACTGTGTAGTA--T--------TACCTGCTAAAGTCTTTTA-AATGCCCTCTATAGTCTGTCTTATCACCTGCATCCTACAGGTGAG-----------------------AGCAATGT-GCCTAAGCC-----------ATG---CAGAAACAGC------AGGCCAGATC----------CAAGG---------------------------------------------------CCTCCCTAATCAGGTCAATGTGCTGTCACCTCTGTGCCCGCATTACCC--------------------------ACTGTACACTCAGAAGTTtcctct-------ctgcctgg-atgcacctacctgtcgtcgtgataaccttcaactcaatcctcaaagaccagctctcaagttacctccttcaagaGATTGAGCTTCACTCC i mm10.chr14 C 0 I 630 s canFam3.chr4 27786376 534 + 88276631 AACACACAA--------ACACTCAAGTAAATAGATATAATCTTATTAATCCCAGGCTCCACAACTCTCCATGGCTCCC-ATGGC------------CTATGAGATCAAGTCAGGAAGTCTCACCCTAGTACTGGAAGGAGGGAAACAAATacttatggagcacgtg---atactgtgccaagctctgggctacatacta--cacattttctgtgtgttacaccatttaataacttcctctaaggttggtctggttactt-catcttgcaggggaggaagccaaggctccgaaatattgagcctcgtggcctaagccacacaacggagaagcgtcagaagcagacttgggaggccagggc----------cacggcctgagccctg--------------ccctctccag--------------cccctccctgaccg--------tcCAGTCACCACGGTGCCCACAACGACGCAccacgccaggc----tcttggctcactg------------ctctttcctccc---ttgcctggaaggcacctacccaacacc-tgac-catttctactcagccctcaaagcccagctctccagttacaccctccatgtgatggccctcggccc- i canFam3.chr4 I 120 C 0 a score=50504.000000 s hg38.chr10_KI270825v1_alt 139173 18 + 188315 GG---GGCCCCCTTCCATAAG s panTro4.chr10 76516747 18 + 133524379 AG---GGCCCCCTTCCATAAG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76185870 18 - 133410057 GG---GGCCCCCTTCCATAAG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35120855 14 + 104879549 -------cccccTTCCATAAG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73916045 18 - 130959383 AG---GGCCCCCTTCCACAAG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75476305 18 - 133195287 AG---GGCCCCCTTCCACAAG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73340017 18 - 125196307 AG---GGCCCCCTTccacaag i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72172658 18 - 125710982 AG---GGCCCCCTTCCACAAG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75632902 21 - 121768101 cGCGAGGCCCCCTTCCATAAG i calJac3.chr12 C 0 C 0 s canFam3.chr4 27786910 18 + 88276631 aa---ctctccCTTCTGTCAG i canFam3.chr4 C 0 C 0 e mm10.chr14 24225468 630 + 124902244 I a score=458691.000000 s hg38.chr10_KI270825v1_alt 139191 158 + 188315 AGAAAAACGATCCCCTTTggctgggcatggtggctcacgcctgtaatcctaacactttgggaggccaaggcgggtggatcacttgaggtcaggagtttgagaccagcctggccaacgtggtgaaaccccgtctctactaaaaatacaaaaataaagcc s panTro4.chr10 76516765 158 + 133524379 AGAAAAACGATCCCCTTTggctgggcatggtggctcacgcctgtaatcctaacactttgggaggccaaggcgggtggatcacttgaggtcaggagtttgagaccagcctggccaacgtggtgaaaccccgtctctactaaaaatacaaaaataaagcc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76185888 158 - 133410057 AGAAAAACAAACCCCTTCggctgggcatggtggctcacgcctgtaatcctaacactttgggaggccaaggcgggtggatcacttgaggtcaggagttcgagaccagcctggccaacgtggtgaaaccccgtctctactaaaaatacaaaaataaagcc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35120869 158 + 104879549 AGAAAAACAATCCCCTTTggctgggcatggtggctcacacctgtaatcctaacactttgggaggccaaagcgggcggatcacttgaggtcaggagttcgagaccagcctggccgacgtggtgaaactccatctctactaaaaatacaaaaataaagcc i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73916063 157 - 130959383 AGAAAAACAATCCCCTTT-gctgggcatggtggctcacgcctgtaatcctaacagtttgggaggccaaggcaggcagatgacttgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaagaatAAAGCc i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75476323 157 - 133195287 AGAAAAACAATCCCCTTT-gctgggcatggtggctcacgcctgtaatcctaacagtttgggaggccaaggcaggcagatgacttgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaagaataaagcc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73340035 157 - 125196307 agaaaaacaatccccttt-gctgggcatggtggctcacgcctgtaatcctaacagtttgggaggccaaggcgggcagatgacttgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaagaataaagcc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72172676 157 - 125710982 AGAAAAACAATCCCCTTT-gctgggcatggtggctcacgcctgtaatcctaacagtttgggaggccaaggcgggcagatgacttgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccgtctttactaaaaatacaagaataaagcc i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75632923 146 - 121768101 AGAAAAACAg---------gccgagcacagtggttcacgcctgtaatcccagcactttgggaggccaaggcaggcagatcacttcaggtcaggagttcaagaccagtctggccaacatggtgaaaaccaatctctact-aaaatacaaaaataagc-- i calJac3.chr12 C 0 C 0 e canFam3.chr4 27786928 0 + 88276631 C e mm10.chr14 24225468 630 + 124902244 I a score=576412.000000 s hg38.chr10_KI270825v1_alt 139349 236 + 188315 tgggcacagtggctcacacctgtaatcccagcactttgggaggccgaggcaggcatatcacgaggtcaggagtttgagaccagcctgaccaacatggtaaaaccccatctctactaaaaatataaaaattagccagatgtgatgacatgagcctgtaatcccagctactcaggaggctgaggcaggaggattgcttgaacccgggaggcggaggttgcagtgagccaagatcgtgc s panTro4.chr10 76516923 236 + 133524379 tgggcacagtggctcacacctgtaatcccagcactttgggaggccgaggcgggcatatcacgaggtcaggagtttgagaccagcctgaccaacatggtaaaaccccatctctactaaaaatataaaaattagccagatgtggtgacatgagcctgtaatcccagctactcaggaggctgaggcaggaggattgcttgaacccgggaggcggaggttgcagtgagctaagatcgtgc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76186046 235 - 133410057 tgggcacagtggctcacacctgtaatcccagcactttgggaggccaaggcgggcagatcacgaggtcaggagtttgagaccagcctgaccaacatggtaaaa-cccatctctactaaaaatataaaaattagccagatgtggcagcaagagcctgtaatcccagctactcaggaggctgaggcaggaggattgcttgaacccgggaggcggaggttgcagtgagccaagatcatgc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35121027 236 + 104879549 tgggcacagtggctcacacctgtaaccccagaactttgggaggccgaggcgggcagatcacgaggtcaggagtttgagaccagcctgaccaacatggtaaaaccccatctctactaaaaatataaaaattatccagatgtggtggcacaagcctgtaatcccagctactcaggaggctgaggcaggaggattgcttgaacccgggaggcggaggttgcagtgagccaagattgtgc i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73916220 236 - 130959383 caggcgcagtggctcacacctgtaatcccagcactttgggacgccaaggcgggcagatcacgaggtcaggagtttgagaccagcctgaccaacatggtgaaaccccatctctactaaaaatatgaaaattagccaggcgtggtggcacgtgcctgtaatcccagctactcaggaggctgagataggaggatcgcttgaacccgggaggcagaggttgcagtgagccaagatcatgc i rheMac3.chr9 C 0 I 128 s macFas5.chr9 75476480 236 - 133195287 caggcgcagtggctcacacctgtaatcccagcactttgggacgccaaggcgggcagatcacgaggtcaggagtttgagaccagcctgaccaacatggtgaaaccccatctctactaaaaatatgaaaattagccaggcgtggtggcacgtgcctgtaatcccagctactcaggaggctgagataggaggatcgcttgaacccgggaggcagaggttgcagtgagccaagatcatgc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73340192 236 - 125196307 caggcgcagtggctcacacctgtaatcccagcactttgggacgccaaggcgggcagatcacaaggtcaggagtttgagaccagcctgaccaacatggtgaaaccccatctctactaaaaatatgaaaattagccaggcgtggtggcacgtgcctgtaatcccagctactcaggaggctgagataggaggatcgcttgaacccgggaggcagaggttgcagtgagccaagatcgtgc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72172833 236 - 125710982 caggcgcagtggctcacacctgtaatcccagcactttgggacgccaaggcgggcagatcacgaggtcaggagtttgagaccagcctgaccaacatggtgaaaccccatctctactaaaaatatgaaaatgagccaggcgtggtggcatgtgcctgtaatcccagctactcaggaggctgagataggaggatcacttgaacccgggaggcagaggttgcagtgagccaagatcgtgc i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27786928 0 + 88276631 C e mm10.chr14 24225468 630 + 124902244 I e calJac3.chr12 75633069 0 - 121768101 C a score=96794.000000 s hg38.chr10_KI270825v1_alt 139585 77 + 188315 tactgtactccaccctgggtgacagagcgagactccgtctcaagtaaataaataaataaat--------aagcaagcaagcaagc s panTro4.chr10 76517159 77 + 133524379 tactgtactccaccctgggtgacagagcgagactccgtctcaagtaaataaataaataaat--------aagcaagcaagcaagc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76186281 77 - 133410057 tactgtactccagcctgggtgacagagcaagactctgtctcaaataaataaataaataaat--------aagcaagcaagcaagc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35121263 85 + 104879549 tactgtactccagcctgggtgacagagcaagactccgtctcaaataaataaataaataaataagcaagaaagcaagcaagcaagc i nomLeu3.chr18 C 0 C 0 s macFas5.chr9 75476716 61 - 133195287 cactacactccagcctgggtgacagagtgaaacttcatctcaaataaataaat------------------------aagcaagc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73340428 61 - 125196307 cactacactccagcctgggtgacagagtgaaacttcatctcaaataaataaat------------------------aagcaagc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72173069 61 - 125710982 cactacactccagcctgggtgacagagtgaaatttcatctcaaataaataaat------------------------aagcaagc i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27786928 0 + 88276631 C e mm10.chr14 24225468 630 + 124902244 I e calJac3.chr12 75633069 0 - 121768101 C e rheMac3.chr9 73916456 128 - 130959383 I a score=306503.000000 s hg38.chr10_KI270825v1_alt 139662 175 + 188315 cgggcatggtggtgcacgcctatagtcccagctacttgggaggctgaggcaggagaatggcttgaacccgggaggcagaggttgcagtgagccaagatcgcgccattgcactccagcctgggtgacagagtgaaactccatctcaaaaaaaaaaaaaaaaagaaaagagaagaaA s panTro4.chr10 76517236 172 + 133524379 cgggcatggtggcgcacgcctatagtcccagctacttgggaggctgaggcaggagaatggcttgaacccgggaggcagaggttgcagtgagccaagatcgcgccattgcactccagcctgagtgacagagtgaaactccatctcaaaaaaaaaaaaaa---gaaaagagaagaaa i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76186358 167 - 133410057 cgggcatggtggcacatgcctatagtcccagctacttgggaggctgaggcaggagaatggcttgaacccaggaggcggaggtggcagtgagccgagatcgcgccattgcactccagcctgggtgacaaagcgaaactccatctcacaaaaaaa--------gaaaagaaaagaaa i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35121348 174 + 104879549 cgggcatggtggcacatgcctatagttccagctgcttgagaggctgaggcaggagaatggcttgaacccagaagacggaagttgcagtgagccgagatcacgccattgcactccagcctgggtgacagagcgaaactccatctcaaaaaaaaaagaaaaa-gaaaagaaaagaaa i nomLeu3.chr18 C 0 C 0 s macFas5.chr9 75476777 143 - 133195287 cgggcgtggtggtgcacacctgtaatcccagctgcttgggaggctgaggc---agaatggcttgaacctgggaggcagaggtt---------------------attgcactccagcctgggtgacagagcaagactccatctcaaaaaaaaa--------aaaaaaaaaaaaaa i macFas5.chr9 C 0 I 2 s papAnu2.chr9 73340489 146 - 125196307 cgggcgtggtggtgcatgcctgtaatcccagctgcttgggagtatgaggcaggagaatggcttgaacctgggaggcagaggtt---------------------attgcactccagcctgggtgacagagcaagactccatctcaaaaaaaaa--------aaaaaaaaaaaaaa i papAnu2.chr9 C 0 I 4 s chlSab2.chr9 72173130 146 - 125710982 cgggcgtggtggtgcacgcctgtaatcccagctgcttgggaggctgaggcaggagaatggcttgaacctgggaggcagaggtt---------------------attgcactccagcctgggtgacagagcaagaccccatctcaaaaaaaaa--------aaaaaaaaaaaagg i chlSab2.chr9 C 0 I 1 s calJac3.chr12 75633069 161 - 121768101 catgcatggtggcgcatgcctataatcccagtgacttgggaggctgaggcaggagaatgtcttgaacccatgaggaggaggttgcagtgagatgagatcacaccactgcactctagcctgggcaacagagtgagactctgtctcaaaaaaaa---------gaaaagaaa----- i calJac3.chr12 C 0 C 0 e canFam3.chr4 27786928 0 + 88276631 C e mm10.chr14 24225468 630 + 124902244 I e rheMac3.chr9 73916456 128 - 130959383 I a score=5096.000000 s hg38.chr10_KI270825v1_alt 139837 2 + 188315 AA s panTro4.chr10 76517408 2 + 133524379 aa i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76186525 2 - 133410057 aa i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35121522 2 + 104879549 aa i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73916584 2 - 130959383 aa i rheMac3.chr9 I 128 C 0 s macFas5.chr9 75476922 2 - 133195287 aa i macFas5.chr9 I 2 C 0 s papAnu2.chr9 73340639 2 - 125196307 aa i papAnu2.chr9 I 4 C 0 s chlSab2.chr9 72173277 2 - 125710982 aa i chlSab2.chr9 I 1 C 0 e canFam3.chr4 27786928 0 + 88276631 C e mm10.chr14 24225468 630 + 124902244 I e calJac3.chr12 75633230 0 - 121768101 C a score=408621.000000 s hg38.chr10_KI270825v1_alt 139839 117 + 188315 AGAAAAACAATCCCTTTCCTTGGATGTGTTTCCCAAGCGC--------CCACAGCAAGGCACAACTTATCAGTCCCCAAGTCAGCTGTGCTGCCGTCTGCTCCCTAATGTGGACCATTCATCCTG s panTro4.chr10 76517410 117 + 133524379 AGAAAAACAATCCCCTTCCTTGGATGTGTTTCCCAAGCGC--------CCACAGCAAGGCACAACTTACCAGTCCCCAAGTCAGCTGTGCTGCTGTCTGCTCCCTAATGTGGACCATTCATCCTG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76186527 117 - 133410057 aaaaaAACAATCCCCTTCCCTGGATGTGTTTCCCAAGCGC--------CCACAGCAAGGCACAACTTACCAGTCCCCAAGTCAGCTGTGCTGCCGTCGGCTCCCTAAAGTGGATCATTCATCCTG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35121524 117 + 104879549 agaaaaaCAATCCCCTTCCTTGGATGTGTTTCCCAAGAGC--------CCACAGCAAGGCACAACTTACCAGTCCCCAAGTCAGCTATGCTGCCGTCTGCTCCCTAATGTGGATCATTCATCCTG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73916586 117 - 130959383 agaaaaaCAATCCCCTTCCTTGGATGTGTTTCCAAAGTGC--------CCATAGCAGGGCACAACTTACCAGTCCCCAAGTCAGCTGTGCTGCTGTCTGCTCCCTAATATGGATCATTCATCCTG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75476924 117 - 133195287 aGAAAAACAATCCCCTTCCTTGGATGTGTTTCCAAAGTGC--------CCATAGCAGGGCACAACTTACCAGTCCCCAAGTCAGCTGTGCTGCTGTCTGCTCCCTAATATGGATCATTCATCCTG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73340641 117 - 125196307 ataaaaacaatccccTTCCTTGGATGTGTTTCCAAAGCGC--------CCATAGCAGGGCACAACTTACCAGTCCCCAAGTCAGCTGTGCTGCTGTCTGCTCCCTAATGTGGATCATTCATCCTG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72173279 117 - 125710982 agaaAAACAATCCCCTTCCTTGGATGTGTTTCCGAAGCGC--------CCATAGCAGGGCACAACTTACCAGTCCCCAAGTCAGCTGTGCTGCTGTCTGCTCCCTAATGTGGATCATTCATCCTG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75633230 117 - 121768101 agaaaaACAATCCCCTTCCTTGGATGTGTTTCCCAAGAGT--------CCACCGCAGGGTGCAACTTACCAGTCCCCAAGTCAGCTGTGCTGCCATCTGCTCCCTAATGTGGATCATCCATCCTG i calJac3.chr12 C 0 C 0 s canFam3.chr4 27786928 124 + 88276631 AAAACATCAATCCC-TTGCTTGGCTGTGCTTTCTGATGCCGTCTCTAACCACATTAGAGCACAACTTACCAGTCCCCCAGCCAGCGGCACCGCTACCTGCTTCATAACGTAGGTCATTCATCTCA i canFam3.chr4 C 0 C 0 e mm10.chr14 24225468 630 + 124902244 I a score=1083366.000000 s hg38.chr10_KI270825v1_alt 139956 325 + 188315 A--CTACTACAGCACAGTACGTTTACTTGAAGAAGTGAATAAATG-ATGTTCC--TTCT-GACTTACAGA--CCAAGAAACAGGGCCGTCAGA-GCAGACTTGACCTTTACAGGGACAACTGGTAAACAGCCCATCTACAGTAGCATCCTGGAGGTTACACCTGGCAAAGAGTTACCCCTTGGCTGGGTGCACCTGAGCAAACCCATCTGGACTAACGCCGGTGTCAGGAAGTAGCACATCCACACAGTGCAGCTATGGCCCTCTGAGG-AAAGACTGCTGCA---TCGCATCAGAAAGGCAGCAT-CCGTGACTTCTGCGGTCCACGCTG--ACGGGTGG s panTro4.chr10 76517527 325 + 133524379 A--CTACTACAGCACAGTATGTTTACTTGAAGAAGTGAATAAATG-ATGTTCC--TTCT-GACTTACAGA--CCAAGAAACAGGGCCGTCAGA-GCAGACTTGACCTTTACAGGGACAACTGGTAAACAGCCCATCTACAGTACTATCCTGGAGGTTACACCTGGCAAAGAGTTACCCCTTGGCTGGGTGCACCTGAGCAAACCCATCTGGACTAACTGCGGTGTCAGGAAGTAGCACATCCACACAGTGCAGCTATGGCCCTCTGAGG-AAAGACTGCTGCA---TCGCATCAGAAAGGCAGCAT-CAGTGACTTCTGCGGTCCACGCTG--ACGGGCGG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76186644 318 - 133410057 ACTCTACTACAGCACAGTACGTTTACTTGAAGAAGTGAATAAATG-ATGTTAC--TTCT-GACTTACAGA--CCAAGAAACAGGGCCGTCAGA-GCAGACTTGACCTTTACAGGG---------AAACAGCCCATCTACAGTAGCATCCTGGAGGTTACACCTGGCAAAGAGTTACCCCTTGGCTGGGTGCACCTGAGCAAACCCATCTGGACTAACTCCGGTGTCAGGAAGTAGCACATCCACACAGTGCAGCTATGGCCCTCTGAGG-AAAGACTGCTGCA---TCGCATCAGAAAGGCAGCAT-CCGTGACTTCTGCGGTCCACGCTG--ACAGGCGG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35121641 329 + 104879549 ACTCTACTACAGCACAGTATGTTTACTTGAAGAAGTAAATAAATG-ATGTTCC--TTCT-GACTTACGGA--CCAAGAAACAGGGCCATCAGG-GCAGACTTGACCTTTACAGGGACAACTGGTAAACAGCCCATCTATAGCAGCATCCTGGAGGTTACAGCTGGCAAAGAGTTACCCTTTGGCTGGATGCACCTGAGCAAACCCATCTGGACTAACTCTGGTGTCAGGAAGTAGCACATCCACACAGTGCAGCTATGGCCCTCTGAGGAAAAGACTGCTGCA---TCGCATCAGAAAGGCAGCATCCCGTGACTTCTGCGGCCCACGCTG--ATGGGCGG i nomLeu3.chr18 C 0 I 2353 s rheMac3.chr9 73916703 327 - 130959383 ACTCCACCACAGCACAGTACGTTTACTTGAAGAAGTGAATGAATG-ATGTTCC--TTCT-GACTTACAGA--CCAAGAAGCAGGGCCATCAGA-GCAGACTTGACCTTCACAGGGACAACTAGTAAACAGCCCATTTACAGTAGCATCCTGGAGGTTACACCTGGCAAAGAGTTACCCCTTGGCTGGGTGCACCTGAGCAAACCCATCCGGACTAACTCCGGTGTCAGGAAGTAGCACATCCACACAGTGCAGCTGTGGCCCTCCGAGG-GAAGACTGCTGCA---TCGCATCAGAAAGGCAGCAT-GCGCGACTTCTGTGGCCCACGCTT--ATGGGTGG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75477041 327 - 133195287 ACTCCACCACAGCACAGTACGTTTACTTGAAGAAGTGAATGAATG-ATGTTCC--TTCT-GACTTACAGA--CCAAGAAGCAGGGCCATCAGA-GCAGACTTGACCTTCACAGGGACAACTAGTAAACAGCCCATTTACAGTAGCATCCTGGAGGTTACACCTGGCAAAGAGTTACCCCTTGGCTGGGTGCACCTGAGCAAACCCATCCGGACTAACTCCGGTGTCAGGAAGTAGCACATCCACACAGTGCAGCTGTGGCCCTCCGAGG-GAAGACTGCTGCA---TCGCATCAGAAAGGCAGCAT-GCGCGACTTCTGTGGCCCACGCTT--ATGGGTGG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73340758 327 - 125196307 ACTCCACCACAGCACGGTACGTTTACTTGAAGAAGTGAATGAATG-ATGTTCC--TTCT-GACTTACAGA--CCAAGAAGCAGGGCCATCAGA-GCAGACTTGACCTTCACAGGGACAACTAGTAAACAGCCCATTTACAGTAGCATCCTGGAGGTTACACCTGGCAAAGAGTTACCCGTTGGCTGGGTGCACCTGAGCAAACCCATCCGGACTAACTCCGGCGTCAGGAAGTAGCACATCCACACAGTGCAGCTGTGGCCCTCCGAGG-AAAGACTGCTGCA---TCGCATCAGAAAGGCAGCAT-GCGCAACTTCTGTGGCCCACGCTT--ATGGGTGG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72173396 327 - 125710982 ACTCCACCACAGCACAGTACGTTTACTTGAAGAAGTGAACGAATG-ATGTTCC--TTCT-GACTTACAGA--CCAAGAAGCAGGGCCATCAGA-GCCGACTTGACCTTCACAGGGACAACTAGTAAACAGCCCATTTACAGTAGCATCCTGGAGGTTACACCTGGCAAAGAGTTACCCGTTGGCTGGGTGCACCTGAGCAAACCCATCCGGACTAACTCCGGCATCAGGAAGTAGCACATCCACACAGTGCAGCTGTGGCCCTCCGAGG-AAAGACTGCTGCA---TTGCATCAGAAAGGCAGCAT-GCGCGACTTCTGTGGCCCACGCTT--ATGAGTGG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75633347 326 - 121768101 ACTCCACCATAGCACAGTATGTTTACTTGAAGAAGTGAATGAATG-ATGTTCC--TTCT-GACTTACAGA--CCAAGAAACAGGGCCGTCAGA-GCAGGCTTGACCTTTAAAGGGACAACTGGTAAACAGCCCATCTACAGTAGCATCCTGGATGTTACACCTGGCAAAGAGTTACCCCTTGACTAGGTGCACCTGAGCAAACCCATCCAGACTAACTCCAGTGTCCGGAACTAGCGCAGCCACACAGTGCAGCTATGGCCTCCCG-GG-AAAGACTGCTGCA---TCGCGTAGGAAAGGCAGCAT-GCGTGACTTCTGGGGCCCACGCTG--ACAGGCAG i calJac3.chr12 C 0 C 0 s mm10.chr14 24226098 295 + 124902244 --aCCACCGCCATGCACTCTGTTGTAGTGAATAAGTAAATAAACATATGCCCCCATCTA-GACGTACAAACCCCAGCACACAGGGCAGGCACA-GCAGACCTGACATTCACTGGGACAAC-ATTAAACAGAGTG-----ACTGGTCTTCCAGAAGTTAC-CCTGGC--AGAGTTCAGCACTGGCAG-----------GCTAAACCATTGGA--------TAGCAACAGCAGG------GTCCATGTGATGAAGCTGTAGCCA-CCAAGG-AA--ACCCCTACA---CACCAGGAGAAAAGTGGTCC-CAGTGAACTGTGGGAGCTGTGCCTGAAAGGGTGC i mm10.chr14 I 630 C 0 s canFam3.chr4 27787052 287 + 88276631 ACACCATCCCAGCTCAGGGTGGTGGCGTGAGTAAGGGAATGAATG-ATCTCCC--TTCTAGACTTACAGA--CCAGGAAACAGGACAGTCAGAGGCGGACCTGACCTTTGCAGGGACAACTGGTAAACAGCCTGTCTAGAGTAACCTGCTGGAGATTACACACGGCGAGCAGTTCTTCCTTAGCTGGGGACACCTGAGC------------------TCCAGGGTTAGGACGTAGCTCAGCCACAGGGTG-----ATGGC--------G-AAAGGCAGCCACAGGGTGATGGCAAAAGGCCCCCAC-CCG-----GCTGGGGGCCGAGCT----------- i canFam3.chr4 C 0 C 0 a score=90204.000000 s hg38.chr10_KI270825v1_alt 140281 42 + 188315 GGAGGCACCTTGGGGCCTCCTTCCCGCACTGCAGACAATGGC s panTro4.chr10 76517852 42 + 133524379 GGAGGCACCTTGGGGCCTCCTTCCCGCACTGCAGACAATGGC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76186962 42 - 133410057 GGAGGCATCTTGGGGCCTCCTTCCCGCACTGCGGACATTGGC i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73917030 42 - 130959383 GGAGGCACCTTGGGGCCTCCTCTCCGCACTGCGGACATTGGC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75477368 42 - 133195287 GGAGGCACCTTGGGGCCTCCTCTCCGCACTGCGGACATTGGC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73341085 42 - 125196307 GGAGGCACCTTGGGGCCTCCTCTCCGCACTGCGGACATTGGC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72173723 42 - 125710982 GGAGGCACCTTGGGGCCTCCTCTCTGCACTGCGGACATTGGC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75633673 41 - 121768101 GGAGGCACCTTGGGGCCTCCTC-CCGCACTGCAGACATTGGC i calJac3.chr12 C 0 C 0 s mm10.chr14 24226393 22 + 124902244 -----------AGAGCTTCCTCTGCACCCTCCT--------- i mm10.chr14 C 0 C 0 s canFam3.chr4 27787339 20 + 88276631 -----CCCC-----GCCTTCTC----CACTGCCC-------- i canFam3.chr4 C 0 C 0 e nomLeu3.chr18 35121970 2353 + 104879549 I a score=2187076.000000 s hg38.chr10_KI270825v1_alt 140323 631 + 188315 TGGGAAGCCCACACCCC-AGCCTCCTGGCACTCTCACTTCTAGGCACAGGATGCAGCAACCCCTGGCAAAAGCAGCTCCTCTTTGCTGAC-CTGGACATAAGGACGCCAGGACCCACAGTGGGCCTGAGCCAACAGCACCCGGCTCCAACGGTGGAGCAGCCCAAGGTCCCCCTGGGG-AAGGGCTGGAAAGACGAGCTCTCTGTCCTGACCCACTTCTCCCTGCACACTCTTCCCAGATCTGGCCTGGCCCAGCCAGAAAGCCAACTATGAGATCCTTCTCATCTTATGACATTAGTAAGAGAAATACTCACTCGTATGCTGGTAT---TAGCACA-TTAGACTCCCCAAGGCCACTC--------CCACTTTACAG--------AGGAACAAAGTGACACCCAGAGCCAAGTCCCTAAACTGAGCTCCTCTCACTCGCT--GCCACCGAGCTGCACTCACACCACAGCTCTCCCTTAGAGGGAACAGACAGGTGTGG--TCTCTGTCTCCCTTC-CAGGACAGGCTTGGACACTGAGGAGATGC------------------------------------------------------------------CGTGC-CTA----------------------TTTCCCAAACACC---------------------GAGTAAAAGGAACCCCTG---------------------GGGTCCAGcccacacccaggttctgattcacagacctag-ggtgaggccaaggggtttaatctttcagaagcttc s panTro4.chr10 76517894 631 + 133524379 TGGGAAGCCCACACCCC-AGCCTCCTGGCACTCTCACTTCTAGGCACAGGATGCAGCAACCCCCGGCAAAAGCAGCTCCTCTTTGCTGAC-CTGGACATAAGGACGCCAGGACCCACAGTGGGCCTGAGCCAATAGCACCTGGCTCCAACAGTGGAGCAGCCCAGGGTCCCCCTGGGG-AAGGGCTGGAAAGACGAGCTCTCCGTCCTGACCCACTTCTCCCTGCACACTCTTCCCAGATCTGGCCTGGCCCAGCCAGAAAGCCAACTATGAGATCCTTCTCATCTTATGACATTAGTAAGAGAAATACTCACTCATATGCTGGTAT---TAGCACA-TTAGACTCCCCAAGGCCACTC--------CCACTTTACAG--------AGGAACAAAGTGACACCCAGAGCCAAGTCCCTAAACTGAGCTCCTCTCACTCGCT--GCCACCGAGCTGCACTCACACCACAGCTCTCCCTTAGAGGGAACAGACAGGTGTGG--TCTCTGTCTCCCTTC-CAGGACAGGCTTGGACACTGAGGAGATGC------------------------------------------------------------------CGTGC-CTA----------------------TTTCCCAAACACC---------------------GAGTAAAAGGACCCCCTG---------------------GGGACCAGcccacacccaggttctgattcacagacctag-ggtgaggccaaggggtttaatctttcagaagcttc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76187004 636 - 133410057 TGGGAAGCCCACACCCC-AGCCTCGTGGCACTCTCACTTCTAGGCACAGGATGCAGCAACCACGGGCAAAAGCAGCTCCTCTTTGCTGAC-CTGGACATAAGGACGCCAGGACCCACAGTGGGCCTGAGCCAACAGCACCCCACTCCAACGGTGGAGCAGCCCAAGGTCCCCCTGGGG-AAGGGCTGTAAAGACGAGCTCTCCGTCCTGACCTACTTCTCCCTGCACACTCTTCCCAGATCTGGCCTGGCCCAGCCAGAAAGCCAACTATGAGATCCTTCTCATCTTATGACATTAGTAAGAGAAATACTCACTCGTATGCTGGTAT---TAGCACA-TTAGACTCCCCAAGGCCACTC--------CCACTTTACAG--------AGATACAAAGTGACACCCAGAGCCAAGTCCCTAAACTGAGCTCCTCTCACTCGCT--GCCACCGAGCTGCACTCACACCACAGCTCTCCCTTAGAGGGAACAGACAGGTGTGGTCTCTCTGTCTCCCTTC-CAGGACAGGCTTGGACACTGAGGAGATGC------------------------------------------------------------------CATGC-Cta----------------------tttcccaaacaccaa------------------tgagtaaaaggaccccctg---------------------gggaccagcccacacccaggttctgattcacggacctag-ggtgaggccaaggggtttaatctttcagaagcttc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35124323 636 + 104879549 TGGGAAGCCCACACCCC-AGCCTCCTCGCACTCTCACTTCTAGGCACAGGATGCAGCAACCACGAGCAAAAGCAGCTCCTCTTTGCTGAC-CTAGACATAAGGACGCCAGGACCCACAGTGGGCCTGAGCCAACAGCACCCTGCTCCAACGGTGGAGCAGCCCAAGGTCCCCCTGGGG-AAGGGCTGGAAAGACGAGCTCTCCGTCCTGACCCACTTCTCCCTGCACACTCTTCCCAGATCTGGCCTGGACCAGCCAGAAAGCCAACTATGAGATCCTTCTCATCTTATGACATTAGTAAGAGAAATACTCACTGGTATGCTGGTAT---TAGCACA-TTAGACTCCCCAAGGCCACTC--------CCACTTTACAG--------AGGAACAAAGTGACACCCAGAGCCAAGTCCCTAAACTGAGCTCCTCTCACTCGCT--GCCACCGAGCTGCACTCACACCACAGCTCTCCCTTAGAGGGAACAGACAGGTGTGGTCTCTCTCTCTCCCTTC-CAGGACAGGCTTGGACACTGAGGAGATGC------------------------------------------------------------------TATGC-Cta----------------------tttcccaaacaccac------------------ggagtaaaaggatcccctg---------------------gggaccagcccacatccaggttctgatttacagatctag-ggtgaggccgagaggtttaatctttcagaagcttc i nomLeu3.chr18 I 2353 C 0 s rheMac3.chr9 73917072 636 - 130959383 TGGGAAGCCCACACCCC-AGCTTCCTGGCACTCTCACTTCTAGGCACAGGATGCAGCAACCAAGGGCAGAAGCAGCTCCTCTTTGCTGAC-CTGGACATAAGGATACCAGGGCCCACCGCGGGCCTGAGCCAACAGCACCCTGCTCCAAAGGTGGAGCAACCCAAGGTCCCCCTGGGG-AAGGGCTGGAAAGACGAGCTCTCTGTCCTGACCCACTTCTCCCTGCACACTCTTCCCAGATCTGGCCTGGCCCAGCCAGAAAGCCAACCATGAGATCCTTCTCCTCTTATGACATTAGTAAGAGAAATACTCACTCGTATGCTGGTAT---TAGCACA-TTAGACTCCCCAAGGCAACTC--------TCACTCTACAG--------AGGAGCAAAGTGGCACCCAGAGCCAAGTCCCTAAACTGAGCTCCTCTCACTCGCT--GCCGCCGAGCTGCACTCACACCACAGCTCTCCCTTAGAGGGAACAGACAGGTGTGGTCTCTCTGTCTCCCTCC-CAGGGCAGGCTTGGACACTGAGGAGATGC------------------------------------------------------------------CATGC-CTA----------------------TTTCCCAAACACCAC------------------TGAGTAAAAGGACCCCCTG---------------------GGGACCAGcccatgcccaggttctgattcacagacctag-ggtgaggccaagaggtttaatctttcagaagtttc i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75477410 636 - 133195287 TGGGAAGCCCACACCCC-AGCTTCCTGGCACTCTCACTTCTAGGCACAGGATGCAGCAACCAAGGGCAGAAGCAGCTCCTCTTTGCTGAC-CTGGACATAAGGACACCAGGGCCCACCGCGGGCCTGAGCCAACAGCACCCTGCTCCAAAGGTGGAGCAACCCAAGGTCCCCCTGGGG-AAGGGCTGGAAAGACGAGCTCTCTGTCCTGACCCACTTCTCCCTGCACACTCTTCCCAGATCTGGCCTGGCCCAGCCAGAAAGCCAACCATGAGATCCTTCTCCTCTTATGACATTAGTAAGAGAAATACTCACTCGTATGCTGGTAT---TAGCACA-TTAGACTCCCCAAGGCAACTC--------TCACTCTACAG--------AGGAGCAAAGTGGCACCCAGAGCCAAGTCCCTAAACTGAGCTCCTCTCACTCGCT--GCCGCCGAGCTGCACTCACACCACAGCTCTCCCTTAGAGGGAACAGACAGGTGTGGTCTCTCTGTCTCCCTCC-CAGGGCAGGCTTGGACACTGAGGAGATGC------------------------------------------------------------------CATGC-CTA----------------------TTTCCCAAACACCAC------------------TGAGTAAAAGGACCCCCTG---------------------GGGACCAGcccatgcccaggttctgattcacagacctag-ggtgaggccaagaggtttaatctttcagaagtttc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73341127 623 - 125196307 TGGGAAGCCCACACCCC-AGCTTCCTGGCACTCTCACTTCTAGGCACAGGATGCAGCAACCAAGGGCAGAAGCAGCTCCTCTTTGCTGAC-CTGGACATAAGGACACCAGGGCCCACCGTGGGCCTGAGCCAACAGCACCCCGCTCCAAAGGTGGAACAACCCAAGGTCCCCCCGGGG-AAGGGCTGGAAAGACGAGCTCTCTGTCCTGACCCACTTCTCCCTGCACACTCTTCCCAGATCTGGCCTGGCCCAGCCA-------------GAGATCCTTCTCCTCCTATGACATTAGTAAGAGAAATCCTCACTCGTATGCTGGTAT---TAGCACA-TTAGACTCCCCAAGGCCACTC--------TCACTCTACAG--------AGGAGCAAAGTGGCACCCAGAGCCAAGTCCCTAAACTGAGCTCCTCTCACTCGCT--GCCGCCGAGCTGCACTCACACCACAGCTCTCCCTTAGAGGGAACAGACAGGTgtggtctctctgtctccctcc-caggGCAGGCTTGGACACTGAGGAGATGC------------------------------------------------------------------CATGC-CTA----------------------TTTCCCAAACACCAC------------------TGAGTAAAAGGACCCCCTG---------------------GGGACCAGCCCACACCCAGGTTCTGATTCACAGACCTAG-GGTGAGGCCGAGAGGTTTAATCTTTCAGAAGTTTC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72173765 636 - 125710982 TGGGAAGCCCACACCCC-AGCTTCCTGGCACTCTCACTTCTAGGCACAGGATGCAGCAACCAAGGGCAGAAGCAGCTCCTCTTTGCTGAC-CTGGACATAAGGACACCAGGGCCCACCGTGGGCCTGAGCCAACAGCACCCCGCTCCAAAGGTGGAGCAACCCAAGGTCCCCCTGGGG-AAGGGCTGGAAAGATGAGCTCTCTGTCCTGACCCACTTCTCCCTGCACACTCTTCCCAGATCTGGCCCGGCCCAGCCAGAAAGCCAACCATGAGATCCTTCTCCTCTTATGACATTAGTAAGAGAAATACTCACTCGTATGCTGGTAT---TAGCACA-TTAGACTCCCCAAAGCCACTC--------CCATTCTACAG--------AGGAGCAAAGTGGCACCCAGAGCCAAGTCCCTAAACTGAGCTCCTCTCACTCGCT--GCCGCCGAGCTGCACTCACACCACAGCTCTCCCTTAGAGGGAACAGACAGGTGTGGTCTCTCTGTCTCCCTTC-CAGGGCAGGCTTGGACACTGAGGAGATGC------------------------------------------------------------------CATGC-CTA----------------------TTTCCCAAACACCAC------------------TGAGTAAAAGGACCCCCTG---------------------AGGACCAGcccacacccaggttctgattcacagacctag-ggtgaggccgagaggtttaatctttcagaagtttc i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75633714 645 - 121768101 TGGGAAGCCCACACCCC-AGCCTCCTAGCACTCTCACTTCTAGGCACAGGATGCAGCAACCAAGGGCAGAAGCACCTCCTCTTTGCTGAC-CTAGACAGAAGAACGCCGGGGCCCACAGTGGGCCTGAGCCAACAGCACCCCGCTCCAACAGTGGAGCAGCCTGAGGTCCCCCTGGGG-AAGGGCTGGAAAGACGAGCTCTCCGTTGTGACCCACTTCTTCCTGCACACTCTTCCCAGATCTGGCCTGGCCCAGCCGGAAAGCCAACCATGAGATCCTCCTCATCTTATGACATTAGTAAGAGAAATACTTACTCTTGTGCTGGTAT---TAGCACA-TTAGACTCCCCAAGGCCACTC--------CCACTTTACAGAGGAGCAAAGGAGCAAAGTGGCACCCAGAGCCAAGTCCCTAAATGGAGCTCCTCCCACGCGCT--GCCGCCGAGCTGCACTCACACCACAGCTCTCCCTTAGAGGAAACAGACAGGTGTGGTCTCTCTGTCTCCTTTC-CAGGGCAGGCTTGGACACTGAGGAGACGC------------------------------------------------------------------CATGCACCA----------------------Tttcccaaataccac------------------tgagtaaagggaccccctg---------------------gggaccggcccacacacaggttctgattcactgacctag-ggtgaggcccagaggtttcatctttcagaatcttc i calJac3.chr12 C 0 C 0 s mm10.chr14 24226415 679 + 124902244 ------------ACTCT-GGTGCCCTGCCATCCTCACTCCTAAG-ACAGAATATGACAA---GGTGTAGAGGCAGCCACT-----CTGACGCTGGAGGGACAGAGGCCAGGGTGGGCAGT---CCTAGGGC-ACGGTGCCTGGCTCCAGTGGTGTATAAGCCAGAGATCCCTTTGGGGAAAGAGGAAGAAAGAGGAGCCCTCTGTCCTGACCCACTTCTCTCTGAGCTCAATTCCCAGAGCTGGC--AGCACAGCCCCAAAG-CAACTGTGACATCCT------------GTGTCAATGAAAGAAACTC--------ATGTTTACCT---TAGAGCACTCAGACTGACCAAAGCCACTCTAAAACTTCCAGTTCCCAG--------ATGGG-------------AGAGCTGTGTCCCCAAACTGGGCAGGCCTCATCCACTCAGCCTGGGACTGGCACTCAAACCAAGGCTCT-CATGAGCATGAGAGAACACATGTAA--CTTCTACATCCCTTC-TTAGATGGGTGCAGGCGCTGAGCAGATGCGGCACATCTTCAAATCCCAACCAGGGCTAGAGATTGgggggggggggggtgctcagtagtagagcacttgt-ctagcacacccaagacctaggttctgtcccccaacatcaccgcaaataaaTAATCAAATAGGCAAAATGGCTTCCTG---------------------AGGGCCAACCTACTCCTGGGTTCTGATTC---------G-AGAAAGCTGGACAGGATGA--CGTTCAGAAG-TTC i mm10.chr14 C 0 C 0 s canFam3.chr4 27787359 589 + 88276631 CCTGGTGCTCAGGCCCCGGGCCTCCCGGCTCTCTC-CCCCTGGACATGGGAGGCAGCAGTCCACGGCAAAAGCAGCTCCTCTCCGCTGAC-CTGGACAGAAAGACGCCGGGGCCTGGAGGGGACCTCAGCCACCAGCACCCTGCTCCCAC----------------GTCGCCTAGGGG-AAGAG--GCCAAGAGGAGCTCTGCGTCCTGACCCACTTTTCCCAGGGCTCCCTTCCCAGATCTGGCCTGGCCC--------------CAGTGAGATCCTTCTCACCTCGTGACATCA--------------CACACGTAT--TGGTACAGAGAGGATG-CT-GCCTCATCGAAACCACGCTAAGACT-CCACCTGACAG---------TAAGGAAAATGGTGCCTGGAGGTAGGTCCCTGGGCTGTGCTCCTC-----CGGC--GCC---------CACCAACATCACAGGTGGCCCTCAG---GATGGGATAGATG-GGCCGCTCTGCTTCCCTTCTCCCAGCAGGCTCACATACGGAGGACACAC-------------------------------------------------------------------ATGC-ATA-----------------------------GATATCCC------------------TGAG--GTGGGGTCTCCTGCATGCTGGAAATGTGGATACAGAGACCAACCCACCCCCAGG--CTGTCTCAGGACCCCCGTGGTGAGGCCCAGGAGGCCCATTTTTCAGGAGCTTC i canFam3.chr4 C 0 I 17 a score=19060.000000 s hg38.chr10_KI270825v1_alt 140954 6 + 188315 cccagt s panTro4.chr10 76518525 6 + 133524379 cccagt i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76187640 6 - 133410057 cccagt i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35124959 6 + 104879549 cccagt i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73917708 6 - 130959383 ccccgt i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75478046 6 - 133195287 ccccgt i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73341750 6 - 125196307 CCCAGT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72174401 6 - 125710982 cccagt i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75634359 6 - 121768101 cctggt i calJac3.chr12 C 0 C 0 s mm10.chr14 24227094 6 + 124902244 CCAAGT i mm10.chr14 C 0 C 0 e canFam3.chr4 27787948 17 + 88276631 I a score=539558.000000 s hg38.chr10_KI270825v1_alt 140960 154 + 188315 gactctgaaaaagccaatccaaagac----tgcacccggggaaccCCAAGCG----TGAACCCAGG---ACTGCTGTTTCAGCCCAgcaatttgtatcaacagccgtt-caaagtccacaccctttgacccaacagcaccacttctaggaattcatcctgagaaaa s panTro4.chr10 76518531 154 + 133524379 gactctgaaaaagccaatccaaagac----tgcacctggggaaccCCAAGCG----TGAACCCAGG---ACTGCTGTTTCAGCCCAgcaatttgtatcaacagccgtt-caaagtccacaccctttgacccaacagcaccacttctaggaattcatcctgagaaaa i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76187646 154 - 133410057 gactctgaaaatgccaatccaaaaac----cgcacctggggaaccCCAAGTG----TGAACCCAGG---ACTGCTGTTTCAGCCtagcaatttgtatcaacagccgtt-caaagtccacaccctttgacccaacagcactacttctaggaattcatcctgagaaaa i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35124965 154 + 104879549 gactctgaaaaagccaatccaaagac----tgcacctggggaaccCCAAGCG----TGAACCCAGG---ACTGCTGTTTCAGCCtagcaatttgtatcaacagccgtt-caaagtccacaccctttgacccaacagcaccacttttaggaattcatcctgagaaaa i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73917714 154 - 130959383 gactctgaaaaagccaatccaaagac----tgcacctggggaaccCCAAGCG----TGAACCCAGG---ACTGCTGTTTCAGCCtagcactttgtatcgatagccatt-cgaagtccacaccctttgacccaacagcaccacttccaggaattcatcctgagaaaa i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75478052 154 - 133195287 gactctgaaaaagccaatccaaagac----tgcacctggggaaccCCAAGCG----TGAACCCAGG---ACTGCTGTTTCAGCCtagcactttgtatcgatagccatt-cgaagtccacaccctttgacccaacagcaccacttccaggaattcatcctgagaaaa i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73341756 154 - 125196307 GACTCTGAAAAAGCCAATCCAAAGAC----TGCACCTGGGGAACCCCAAGCG----TGAACCCAGG---ACGGCTGTTTCAGCCTAGCACTTTGTATCGATAGCCATT-CGAAGTCCACACCCTTTGACCCAACAGCACCACTTCCAGGAATTCATCctgagaaaa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72174407 154 - 125710982 gactctgaaaaagccaatccaaagac----tgcacctggggaaccCCAAGCG----TGAACCCAGG---ACTGCTGTTTCAGCCtagcactttgtatcgatagccatt-cgaagtccacaccctttgacccaacagcaccacttccaggaattcatcctgagaaaa i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75634365 154 - 121768101 gactctgaaaaagccaatccaaagac----tgcacctggggaaccCCAAGCA----TGAACCCAGGATCACTGCTGTTTCAGCCtagcaatttgtatgaacagcctttaaaaagtccacacccttcaacccaacaacaccactttcaa----tcatcctgagaaaa i calJac3.chr12 C 0 C 0 s mm10.chr14 24227100 150 + 124902244 GATTCCGGAGGAGTCAGTCCAAAGACTGAGTGAGCCTGGAGAGGCTGCAGAGACAATGAGCCCCCG---------------GCGCAGCAATCTATCCCTACAGCCTTGACAACACGCACACAAACTGACCTCACAGCACTGCTTCCAGGGCTT-ATCAGGAGGAAA i mm10.chr14 C 0 I 1245 s canFam3.chr4 27787965 151 + 88276631 GGTTCTCAAGAAGACTGCCT--AGGC----CACACCTGGAGAAACCTAGGAG----C-AACTCAGT----CAGAAGCGTCAGCCtggcaacgtgcatcaaaagccccaaagatgcacatgccctttgacccagtggcagcactttcaggaattccccctgaagata i canFam3.chr4 I 17 C 0 a score=91825.000000 s hg38.chr10_KI270825v1_alt 141114 31 + 188315 taaagaagcatacaaagatctatagcatgag s panTro4.chr10 76518685 31 + 133524379 taaagaagcatacaaagatctatagcatgag i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76187800 27 - 133410057 t----aagcatacaaagatctatagcacgag i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35125119 31 + 104879549 taaagaaccatacaaagatctatggcatgag i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73917868 31 - 130959383 taaagaagcacacaaagatctacggcatgag i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75478206 31 - 133195287 taaagaagcacacaaagatctacggcatgag i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73341910 31 - 125196307 taaagaagcaCACAAAGATCTACAGCATGAG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72174561 31 - 125710982 taaagaagcacacaaagatctacagcatgag i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75634519 30 - 121768101 taaagacgtgcacaaagatctgt-gcatgag i calJac3.chr12 C 0 C 0 s canFam3.chr4 27788116 30 + 88276631 taaagaaacccacaaatacctat-gcatggg i canFam3.chr4 C 0 I 724 e mm10.chr14 24227250 1245 + 124902244 I a score=308391.000000 s hg38.chr10_KI270825v1_alt 141145 110 + 188315 gtgatgcac------------cgcagcattgtaagtacag-aaaaaatgggaaatctctacatctccaatcaagaagaactggtgacataaatctcaatcaggcaagactgtgctcccattaa s panTro4.chr10 76518716 110 + 133524379 gcgatgcac------------cgcagcattgtaagtacag-aaaaaatgggaaatctctacatctccaatcaaggagaactggtgacataaatctcaatcaggcaagactgtgctcccattaa i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76187827 122 - 133410057 gatctatacaaagatctatagcacagcattgtgagtacag-aaaaaatgggaaatctctacatctccaatcaaggagaactggtgacataaatCTCAATCGGGCAAGACTGTGCTCCCATTAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35125150 110 + 104879549 gagatgcac------------cgcagcactgtgagtacag-aaaaaatgggaaatctctacatctccaatcaaggagaactggtgacataaatCTCAATCGGGCAAGACTGTGCTCCCATTAA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73917899 110 - 130959383 gagatgcac------------cgcagcattgtgagtacagaaaaaaacgggaaatctctgcatctccaatcaaggggaactggtgacataaatccc-atagggcaagactgtgctcccattaa i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75478237 110 - 133195287 gagatgcac------------cgcagcattgtgagtacagaaaaaaacgggaaatctctgcatctccaatcaaggggaactggtgacataaatccc-atagagcaagactgtgctcccattaa i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73341941 110 - 125196307 GAGATGCAC------------CGCAGCATTGCGAGTACAGaaaaaaaCGGGAAATCTCTGCATCTCCAATCAAGGGGAACTGGTGACATAAATCCC-ATAGGGCAAGACTGTGCTCCCATTAA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72174592 110 - 125710982 gagatgcac------------cgcagcattgcgagtacagaaaaaaacgggaaatctctgcatctccaatcaaggggaactggtgacataaatccc-atagggcaagactgtgctcccattaa i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75634549 108 - 121768101 gagatgcac------------cacagcatcatgagtacag-aaaaaatgggaaatctctacatctccagtcaaagggaactggtgacataaatCT--ACAGGGCAAGACTGTGCTCCCATTTA i calJac3.chr12 C 0 C 0 e canFam3.chr4 27788146 724 + 88276631 I e mm10.chr14 24227250 1245 + 124902244 I a score=36980.000000 s hg38.chr10_KI270825v1_alt 141255 15 + 188315 aaacgaGCCATTGAG s panTro4.chr10 76518826 15 + 133524379 aaacgaGCCATTGAG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76187949 15 - 133410057 AAACGAGCCATTGAG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35125260 15 + 104879549 AAACGAGCCATTGAG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73918009 15 - 130959383 aaatgaGCCAttgag i rheMac3.chr9 C 0 I 759 s macFas5.chr9 75478347 15 - 133195287 aaatgaGCCAttgag i macFas5.chr9 C 0 I 908 s chlSab2.chr9 72174702 15 - 125710982 aaatgaGCCAttgag i chlSab2.chr9 C 0 I 127 s calJac3.chr12 75634657 15 - 121768101 AAATGAGCCACtgag i calJac3.chr12 C 0 I 611 e canFam3.chr4 27788146 724 + 88276631 I e mm10.chr14 24227250 1245 + 124902244 I e papAnu2.chr9 73342051 0 - 125196307 C a score=146624.000000 s hg38.chr10_KI270825v1_alt 141270 396 + 188315 ggccgggcgcggtggctcatacctgtaatcccagcactttgggaggccgaggtgggcggatcatgaggtcaggagatcgagaccatcctggctaacatggtgaaaccccatctctactaaaaatacaaaaaattagctaggcgtggtggcatgcgcttgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccagcaggcggagcttgcagtgagccgagatcgtaccactgcactccagtctgggcgacagagcgagactccatctcaaaaaataaataaaaaaataaataaataaataaataaataaataaacgagccattgagcatccctcattctgggcgacagagcgagactccgtctcaaaaaataaataaataaaT s panTro4.chr10 76518841 324 + 133524379 ggccgggcgcggtggctcatacctgtaatcccagcactttgggaggccgaggtgggcggatcacgaggtcaggagatcgagaccatcctggctaacatggtgaaaccccatctctactaaaaatacaaaaaattagctaggcgtggtggcatgcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccaacaggcggagcttgcagtgagccgagatcgtaccactgcactccagtctgggcgacagagcgagactccgtctc----------------aataaataaataaataaataaataaataa--------------------------------------------------------ataaataaataaat i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76187964 312 - 133410057 ggccgggcacggtggctcacacttgtaattccagcactttaggaggccgaggtaggcagatcatgaggtcaggagatcgagaccgtcctgactaacatggtgaaaccccatctctactaaaaatacaaaaaattagccgggcatggtggcatgtgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccggcaggcggagcttgcagtgagccgagatcataccactgcactctagtctgggcgacagagcgagactccgtctc----------------------------aataaataaataaataa--------------------------------------------------------ataaataaataaat i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35125275 309 + 104879549 ggccaggcgcagtggctcacgcctgtaatcccagcactttgggaggccgaggtgtgcggatcacgagatcaggagatcgagaccatcctggataacacggtgaaaccccgtctctactaaaaatacaaaaaattagccgggcgtggtggcatgcgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccgggaggcggaacttgcagtgagctgagatcgtaccactgcattccagtctggatgacaaagcgagactccatctc----------------aaaaaac-----aaaaagcaaacaaacaa------------------------------------------------------------------aaaa i nomLeu3.chr18 C 0 C 0 e canFam3.chr4 27788146 724 + 88276631 I e mm10.chr14 24227250 1245 + 124902244 I e calJac3.chr12 75634672 611 - 121768101 I e chlSab2.chr9 72174717 127 - 125710982 I e papAnu2.chr9 73342051 0 - 125196307 C e macFas5.chr9 75478362 908 - 133195287 I e rheMac3.chr9 73918024 759 - 130959383 I a score=149967.000000 s hg38.chr10_KI270825v1_alt 141666 213 + 188315 AAACGAGCCAttgagcatccctcattcaaaaatccaaaatgctccagaatcccaaactttcagagcatcaacatgagatagtaacacctttgcattctgatggttcaatgtacatacactttgtttcatacacacaattatttaaaatagtgtataaaatcaccattaagcAgccgggcgcagcggctcacgcctgtaatcccagcactttgg s panTro4.chr10 76519165 213 + 133524379 aaaCGAGCCAttgagcatccctcattcaaaaatccaaaatgctccagaatcccaaactttcagagcatcaacatgagatagtaacacctttgcattctgatggttcaatgtacatacacttcgtttcatacacacaattatttaaaatagtgtataaaatcaccattaagcAgccgggcgcagcggctcacgcctgtaattccagcactttgg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76188276 213 - 133410057 aCATGAACCAttgcgcatccctcattcaaaactccaaaatgctccagaatcccaaacttttagagcgtcaacatgggatagtaatacctttgcattctgatggttcaatgtacatacactttgtttcatacacacaattatttaaaatagtgtataaaatcaccattaagcagccgggcgcagcggctcacacctgtaatcccagcactttgg i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35125584 213 + 104879549 aaACGAGCCAttgagcatccctcattcaaaaatccaaaatgctccagaatcccaaacttttagagcatcaacatgggatagtaatacctttgcattctgaaggttcaatgtacgtacactttgtttcatacacacaagtatttaaaatagtgtataaaatcaccattaagcagccgggcacagcggctcacgcctgtaatcccagcactttgg i nomLeu3.chr18 C 0 C 0 s papAnu2.chr9 73342051 142 - 125196307 AAATGAGCCATTGAGCATCCCTCATTCAAAAATCCAAAACGCTCCAGAATCCAAAACTTTTACAGCATCAACATGGGATAGTAATACCTTTGCATTCTGATGGCTCAATGTACATACACTTTGTTTCATACACACAGTTCTT----------------------------------------------------------------------- i papAnu2.chr9 C 0 C 0 e canFam3.chr4 27788146 724 + 88276631 I e mm10.chr14 24227250 1245 + 124902244 I e calJac3.chr12 75634672 611 - 121768101 I e chlSab2.chr9 72174717 127 - 125710982 I e macFas5.chr9 75478362 908 - 133195287 I e rheMac3.chr9 73918024 759 - 130959383 I a score=777202.000000 s hg38.chr10_KI270825v1_alt 141879 645 + 188315 gaggccgaggcaggcggattgcttgaggtcaggagttcgaggccagcctggccaatatggagaacccccgtctctactaaaaatacaaaaattagccgggcgtggtggcacgtgcctgtagtcccagctactcgggaggctgaggcaggaggactgcttgaactc-gggaggcagaggttgcagtgagctgagattgcaccactgcactccagcctgggtgatagagtgagactctgtctc--aaaaaaaaaaataa--aaaagaaaaataaaaTtaaaaataca---attagccgggcatggtggtgggcacctgtaatcccagctactggggaagctgaggcaggagaatcgcttgaacctgggaggcagaggttgcggtgagccgagatcgtgacactgcacttcagcctgggcaacagagtgagactctgttttgaaactccatctc------aaaaaaaaaaaaaaaaaaaatcacttttaagctatatgtagaaggtatatatgaaacataaatgaatttcatgtttagacttcggtcccatccccaggatatctcattatgtatatgggaatattccaaaatccaaaaataatcaaaaatcggaaatacttctggtcctaagtattttggataagggatattctgcctgTTA s panTro4.chr10 76519378 646 + 133524379 gaggccgaggcaagcagattgcttgaggtcaggagttcgaggccagcctggccaatatggagaacccccgtctctactaaaaatacaaaaattagccgggcgtggtggcacgtgcctgtagtcccagctactcgggaggctgaggcaggaggactgcttgaactc-gggaggcagaggttgcagtgagctgagattgcaccactgcactccagcctgggtgatagagtgagactctgtctc--aaaaaaaataataa--aaaagaaaaataaaaTtaaaaataca---attagccgggcatggtggtgggcacctgtaatcctagctactggggaagctgaggcaggagaatcgcttgaacctgggaggcagaggttgcggtgagccgagatcgcgacactgcacttcagcctgggcaacagagtgagactctgttttgaaactccatctc-----aaaaaaaaaaaaaaaaaaaaatcacttttaagctatatgtagaaggtatatatgaaacataaatgaatttcatgtttagacttcggtcccatccccaggatatctcattatgtatatgggaatattccaaaatccaaaaataatccaaaatctgaaatacttctggtcctaagtattttggataagggatattctgcctgTTA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76188489 656 - 133410057 gaggccgaggcaggcggatcgcttgaggtcgggaattcgaggccagcctggccaacatggagaaaccccatctctactaaaaatacaaaaattagccgggcgtggtggcatgtgcctgtagtcccagctactcgggagactgaggcaggaggactgcttgaactc-gggaagcagaggttgcagtgagctgagactgcgccactgcactccagcctgggtgatagagtgagactctgtctcaaaaaaaaaataataa--aaaataaaaataaaattaaaaatacaaatattagccgggcatggtggtgggcacctgtaatcccagctactggggaagctgaggcaggagaatcgcttgaacctgggaggcagaggttgcagtgagccgagatcgcgacactggacttcagcctgggcaacagagtgagactctgttttgaaactccatctcaaaaaaaaaaaaaaaaaaaaaaaaaatcacttttaagctatatgtagaaggtatacatgaaacataaatgaatttcacgtttagacttcggtcccatccccaggatatctcattatgtatatgggaatattccaaaatccaaaaataatccaaaatctgaaatacttctggtcctaagtattttggataagggatattctgcctgTTA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35125797 643 + 104879549 gaggccgaggcaggcggattgcttgaggtcaggagtttgaggccagcctggccaacatggagaaaccccatctctactaaaaatacaaaaattagccgggcgtggtggcatgtgcctgtagtcccagctactcaggaggctgaggc---aggactgcttgaacccagggaggcagaggttgcagtgagctgagattgcgccactgcactccagcctgggtaatagagtgagactctca-----aaaacaaataataa--aaaataaaaataaaatcaaaaatacaaatattagccgggcatggtggtgggcacctgtaatctcagctactggggaagctgaggcaggagaattgcttaaacctgggaggcagaggttgcagcgagccaagatcgtgacactgcacttcagcctgggcaacagagtgagactctgttttgaaactccatctc------aaaaaaaaaaaaaaaaaaaatcacttttaagctatatgtagaaggtatatatgaaacataaatgaatttcatgtttagacttcggtcccatccccaagatatctcattacgtatatgggaatattccaaaatccaaaaataatccaaaatctgaaatacttctggtcctaagtattttggataagggatattctgcctgTTA i nomLeu3.chr18 C 0 C 0 s papAnu2.chr9 73342193 630 - 125196307 GAGGCCGAGGcacgcggatcacctgaggtcaggagtttgaggccaggctggccaacatggagaaaccccgtctccactaaaaatagaaaaattagccaggcgttgtggcatgcgtctgtagtccctgctactcggaaggctgaggcaggaggactccttaaaccc-aggaggcggaggttgcagtgaactgagattgtgccactgtactccagcctgggtgatagagtgagactctgtctc------aaataaataaataaataaataataaaatcaaaaatacaaatattagctgggcatggtgctgggcacctgcaatcccaactaatcaggaagctgaggcaggagaactgcttgaacctgggaggcagaggttgcagtgagacaagatcgcggcactgcactttagcctgggcaacagagtaagactctgttttgaaactccatctc-----------aaaaaaaaaaaaaaatcacttttaagcTATGTGTaaaaggtatatatgaaacataaatgaatttcatgtttagacttcgGTCCCATCCCCAAggtatctcattatgtatatgggaatattccaa-----------aatccaaaatctgaaatatttctggTCCTAagtattttggataagggatatcCTGCCTGTTA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72174844 631 - 125710982 gaggccgaggcaggtggatcacctgaggtcaggagtttgaggccaggctggccaacatggagaaaccctgtctccactaaaaatacaaaacttagccaggcgttgtggcatgcgcctgtagtccctgctactcggaaggctgaggcaggaggactgcttaaaccc-aggaggcggaggttgcagtgaactgagattgtgccactgtactccagcctgggtgatagactaagactctgtctc--aaaaaaataaataaataaatgaataataaaatcaaaaatacaaatattagctgggcatgatgctgggcacctgcaatcccaactgctcaggaagctgaggcacgagaactgcttgaacctgggaggcagaggttgcagtgagacaagatcacggcactgcactttagcctgggcaacagagtgagactctgttttgaaactccatctc-------aaaaaaaaaaaaaaaaaaatcacttttaagctatgtgtaaaaggtatatatgaaacataaatgaacttcatgtttagacttcggtcccatccccaaggtatctcattatgtatatgggaatat------------------tccaaaatctgaaatatttctggtcttaagtattttggataagggatatcctgcctgTTA i chlSab2.chr9 I 127 C 0 e canFam3.chr4 27788146 724 + 88276631 I e mm10.chr14 24227250 1245 + 124902244 I e calJac3.chr12 75634672 611 - 121768101 I e macFas5.chr9 75478362 908 - 133195287 I e rheMac3.chr9 73918024 759 - 130959383 I a score=288163.000000 s hg38.chr10_KI270825v1_alt 142524 180 + 188315 CAGCATCAGACCTAAAACTTGGAGCCCACTTCAATTAGTGCAGGAAGGACTGCAGATGGCATCTACATACACCATGAAGGTGATAGA---ACTCCTTCCCTGACATGGCTGAGGTTCTACTTGAATATTCCCAGAAAACAAGAGCTCTCGCAATTCCTTAA--CAGTGGTTTCTGGCAATTAAAA s panTro4.chr10 76520024 180 + 133524379 CAGCATCAGACCTAAAACTTGGAGCCCACTTCAATTAGTGCAGGAAGGACTGCAGATGGCATCTACATACACCATGAAGATGATAGA---ACTCCTTCCCTGACATGGCTGAGGTTCTACTTGAATATTCCCAGAAAACAAGAGCTCTCGCAATTCCTTAA--CAGTGGTTTCTGGCAATTAAAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76189145 180 - 133410057 CAGCATTAGACCTAAAACTTGGAGCCCACTTCAATTAGTGCAGGAAGGACTGCAGATGGCATCTACATACACCATGAAGATGGTAGA---ACTCCTTCCCTGACATGGCTGAGGTTCTACTTGAATATTGTCAGAAAACAAGAGCTCTCACAATTCCTTAA--CAGTGGTTTCTGGCAATTAAAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35126440 180 + 104879549 CAGCATCAGACCTAAAACTTGGAGCCCACTTCAATTAGTGCAGGAAGGACTGCAGATGGCATCTACATACACCATGAATATGACAGA---ACTCCTTCCCTGACATGGCTGAGGTTCTACTTGAATATTCCCAGAAAACAAGAGCTCTCACAATTCCTTAA--CAGTGGTTTCTGGCAATTAAAA i nomLeu3.chr18 C 0 C 0 s papAnu2.chr9 73342823 180 - 125196307 TAGCCTCAGACCTAAAACTTGGAGTCCACTTCAATTAGTGCAGGAAGGACCGCAGATGGCATCTACCTCAACCATGAAGATGACAAA---ACTCCTCCCCTGACATGGCTGAGGTTCTACCTGAATATTCCCAGAAAACAAGAGCTCTCGCAATTCCTTAA--CAGTGGTTTCTGGCAATTAAAA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72175475 180 - 125710982 TAGCCTCAGACCTAAAACTTGGAGCCCACTTCAATTAGTGCAGGAAGGACCGCAGATGGCATCTACCTCAACCATGAAGATGACAGA---ACTCCTCCCCTGACATGGCTGAGGTTCTACCTGAATATTCCCGGAAAACAAGAGCTCTCGCAATTCCTTAA--CAGTGGTTTCTGGCAATTAAAA i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27788870 185 + 88276631 CAGCATCAGGCCTAAAACTTGAAGCCCCATTCAGGcagaacaggaaggatcacagggagcatctattccaaccatgaacgtgatagaaggactccttccctgccatgcttgaagttctacttgaatacctccagcagccagaagctcattcccttccctaaagcaatactttccaGCAATAAAAA i canFam3.chr4 I 724 I 43 e mm10.chr14 24227250 1245 + 124902244 I e calJac3.chr12 75634672 611 - 121768101 I e macFas5.chr9 75478362 908 - 133195287 I e rheMac3.chr9 73918024 759 - 130959383 I a score=239603.000000 s hg38.chr10_KI270825v1_alt 142704 195 + 188315 GGCTGCTCTAAgtcaagtgtggtggtgtgcacctgtatctcagctactcaggaggctgcagtgggaggatcagtgggaggataacttgagtccaagagtttgaggctgtagtgcacaatgatcacgcctatgaatggccactgcacttcagcctgggcaacatggcaaaacccccatctcaacaaaaggaaaaag s panTro4.chr10 76520204 183 + 133524379 GGCTGCTCTAAgtcaagtgtggtggtgtgcacctgtatctcagctactcaggaggctg------------cagtgggaggataacttgagtccaggagtttgaggctgtagtgcacaatgatcacgcctatgaatggccactgcacttcagcctgggcaacatggcaaaacccccatctcaacaaaaggaaaaag i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76189325 183 - 133410057 GGCTGCTCTAAgtcaagtgtagtgatgtgcacctgtacctcagctactcaggaggctg------------cagtgggaggataacttgagtccaggagtttgaggctgtagtgcacaatgatcacacctatgaatggccactgcacttcagcctgggcaacatggtaaaacccccatctcaacaaaaagaaaaag i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35126620 183 + 104879549 GGCTGCTCTAAgtcaagtgtggtggtgtgcacctgtatctcagctactcaggaggctg------------cggtgggaggataacttgagtccaggagtttgaggctgtagtgcacaatgatcacgcctatgaatggccactgcacttcagcctgggcaacatggcaaaacccccatctcaacaaaaagaacaag i nomLeu3.chr18 C 0 C 0 s papAnu2.chr9 73343003 183 - 125196307 GGTTGCCCTaagtcaagtgtggtggtgtgcacccatatcccagctactcaggaggctg------------cagtgggaggataccttgagttcaggagtttgaggctgtagtgcacAATGATCACACCTATGAAtgaccactgcccttcagcctgggcaatatggcaaaacccccatctcaacaaaaagaaaaag i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72175655 183 - 125710982 GGTTGCCCTAAgtcaagtgtggtggtgtgcacccgtatcccagctactcaggaggctg------------cggtgggaggataccttgagttcaggagtttgaggctgtagtgcacaatgatcacgtctatgaatgaccactgcccttcagcctgggcaatatggcaaaacccccatctcaacaaaaagaaaaag i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27789055 43 + 88276631 I e mm10.chr14 24227250 1245 + 124902244 I e calJac3.chr12 75634672 611 - 121768101 I e macFas5.chr9 75478362 908 - 133195287 I e rheMac3.chr9 73918024 759 - 130959383 I a score=2296.000000 s hg38.chr10_KI270825v1_alt 142899 3 + 188315 aaC s panTro4.chr10 76520387 3 + 133524379 aaC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76189508 3 - 133410057 aaC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35126803 3 + 104879549 aaC i nomLeu3.chr18 C 0 C 0 s chlSab2.chr9 72175838 3 - 125710982 aaT i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27789055 43 + 88276631 I e mm10.chr14 24227250 1245 + 124902244 I e calJac3.chr12 75634672 611 - 121768101 I e papAnu2.chr9 73343186 0 - 125196307 C e macFas5.chr9 75478362 908 - 133195287 I e rheMac3.chr9 73918024 759 - 130959383 I a score=31692.000000 s hg38.chr10_KI270825v1_alt 142902 58 + 188315 ATGttgctcctctcattctgtcttgctgccaccatgttagaagtgccttttgccctcc s panTro4.chr10 76520390 58 + 133524379 ATGttgctcctctcattctgtcttgctgccaccatgtaagaagtgccttttgccctcc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76189511 58 - 133410057 ATGttgctcctctcattctctcttgctgccaccatgtaagaagtgccttttgccctcc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35126806 58 + 104879549 ATGttgctcctctcattctctcttgctgccaccatgtaagaagtgccttttgccctcc i nomLeu3.chr18 C 0 C 0 e canFam3.chr4 27789055 43 + 88276631 I e mm10.chr14 24227250 1245 + 124902244 I e calJac3.chr12 75634672 611 - 121768101 I e chlSab2.chr9 72175841 0 - 125710982 C e papAnu2.chr9 73343186 0 - 125196307 C e macFas5.chr9 75478362 908 - 133195287 I e rheMac3.chr9 73918024 759 - 130959383 I a score=118770.000000 s hg38.chr10_KI270825v1_alt 142960 433 + 188315 accacgattatgagacctccccagccatgtggaactgttcataggcggaagggacttgccttgtctcagatgagactttggactgtggacttttggattaattctgaaatgagttaagactttgggggactgttgggagggcatgattggttttgaaatgtgaggacctgagatttggaggggccaggggtggaatgataatgatttggctgtgtccctattcaaatctcaactgaattatatgtcccagaattctcacgtgttgtgggagggacttacggggaggtaactgaatcataagggccggtctttcccatgctattcttgtgatagtaagtctcgggagatctgatgggtttatcaggggtttccgcctttgcttcttcctcattctttcttgctgccacattgtaagcagtgccttttgccctct s panTro4.chr10 76520448 433 + 133524379 accatgattatgagacctccccagccatatggaactgttcataggcggaagggacttgccttgtctcagatgagactttggactgtggacttttggattaattctgaaatgagttaagactttgggggactgttgggagggcatgattggttttgaaatgtgaggacctgagatttggaggggccaggggcggaatgataatgatttggctgtgtccctattcaaatctcaactgaattatatgtcccagaattctcacgtgttgtgggagggacttacggggaggtaactgaatcataaggaccggtctttcccatgctattcttgtgatagtaagtctcacgagatctgatgggtttatcaggggtttccgcctttgcttcttcctcattctttcttgctgccacattgtaagcagtgccttttgccctct i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76189569 433 - 133410057 accatgattatgaggcctccccagccatggggaactgttcataggcggaagggacttgccttgtctcagatgagactttggactgtggacttttggattaattctgaaatgagttaagactttgggggactgttgggagggcatgactggttttgaaatgtgaggacctgagatttggaggggccaggggtggaatgataatgatttggctgtgtccctattcaaatctcaactgaattatatctcccagaattcttacatgttgtgggagggacttaccgggaggtaactgaatcataagggccggtctttcccatgctattcttgtgatagtaagtctcacgagatctgatgggtttatcaggggtttccgcctttgcttcttcctcattctttcttgctgccaccatgtaagcagtgccttttgccctct i ponAbe2.chr10 C 0 C 0 e canFam3.chr4 27789055 43 + 88276631 I e mm10.chr14 24227250 1245 + 124902244 I e nomLeu3.chr18 35126864 0 + 104879549 C e calJac3.chr12 75634672 611 - 121768101 I e chlSab2.chr9 72175841 0 - 125710982 C e papAnu2.chr9 73343186 0 - 125196307 C e macFas5.chr9 75478362 908 - 133195287 I e rheMac3.chr9 73918024 759 - 130959383 I a score=37002.000000 s hg38.chr10_KI270825v1_alt 143393 65 + 188315 gccatgattatgagacctcccagccatgtggaactgtaagtcaaattaaacatcctgttcttcca s panTro4.chr10 76520881 65 + 133524379 gccatgattatgagacctcccagccatgtggaactgtaagtcaaattaaacatcctgttcttcca i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76190002 65 - 133410057 gccatgattatgagacctcccagccatgtggaactgtaagtcaaattaaacatcctgttcttcca i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35126864 65 + 104879549 gccatgattatgagacctcccagccatgtggaactgtaagtcaaattaaacatcctgttcttccA i nomLeu3.chr18 C 0 C 0 e canFam3.chr4 27789055 43 + 88276631 I e mm10.chr14 24227250 1245 + 124902244 I e calJac3.chr12 75634672 611 - 121768101 I e chlSab2.chr9 72175841 0 - 125710982 C e papAnu2.chr9 73343186 0 - 125196307 C e macFas5.chr9 75478362 908 - 133195287 I e rheMac3.chr9 73918024 759 - 130959383 I a score=3930.000000 s hg38.chr10_KI270825v1_alt 143458 18 + 188315 aatAAAAAA----AAAAACAAA s panTro4.chr10 76520946 17 + 133524379 aat-AAAAA----AAAAACAAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76190067 22 - 133410057 aataaaaaaaattaaaaaaata i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35126929 11 + 104879549 AAAAAAAAA----AA------- i nomLeu3.chr18 C 0 C 0 s calJac3.chr12 75635283 18 - 121768101 aacaaaaag----aaaaagaaa i calJac3.chr12 I 611 C 0 e canFam3.chr4 27789055 43 + 88276631 I e mm10.chr14 24227250 1245 + 124902244 I e chlSab2.chr9 72175841 0 - 125710982 C e papAnu2.chr9 73343186 0 - 125196307 C e macFas5.chr9 75478362 908 - 133195287 I e rheMac3.chr9 73918024 759 - 130959383 I a score=216.000000 s hg38.chr10_KI270825v1_alt 143476 3 + 188315 AAC s panTro4.chr10 76520963 3 + 133524379 AAC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76190089 3 - 133410057 aaC i ponAbe2.chr10 C 0 C 0 s papAnu2.chr9 73343186 3 - 125196307 aac i papAnu2.chr9 C 0 C 0 s calJac3.chr12 75635301 1 - 121768101 -a- i calJac3.chr12 C 0 C 0 e canFam3.chr4 27789055 43 + 88276631 I e mm10.chr14 24227250 1245 + 124902244 I e nomLeu3.chr18 35126940 0 + 104879549 C e chlSab2.chr9 72175841 0 - 125710982 C e macFas5.chr9 75478362 908 - 133195287 I e rheMac3.chr9 73918024 759 - 130959383 I a score=99837.000000 s hg38.chr10_KI270825v1_alt 143479 59 + 188315 ATGTTGCTCCTAATCCTGAGCAGAGTTTTACTTTCCTGAAGGT-AAAATCTCCTGGCTCC s panTro4.chr10 76520966 59 + 133524379 ATGTTGCTCCTAATCCTGAGCAGAGTTTAACTTTCCTGAAGGT-AAAATCTCCTGGCTCC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76190092 59 - 133410057 ATGTTGCTCCTAATCCTGAGCAGAGTTTTACTTTCCTGAAGGT-AAAATCTCCTGGCTCC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35126940 59 + 104879549 ATGTTGCTCCTAATCCTGAGCAGAGTTTTACTTTCCTGAAGGT-AAAATCTCCTGGCTCT i nomLeu3.chr18 C 0 C 0 s papAnu2.chr9 73343189 60 - 125196307 atgttGCTCCTGATCCTCAGCAGAGTTTTACCTTCCTGAAGATAAAAATCTCCTggctgc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72175841 60 - 125710982 ATGTTGCTCCTGATCCTCAGCAGAGTTTTACTTTCCTGAAGGTAAAAATCTCCTGGCTGC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75635302 58 - 121768101 -TGCTGCTCCTGATCCTGAGCAGACTTTTACTTTCCTGAAGGT-AAAATCTCCTGTCTCC i calJac3.chr12 C 0 T 375 e canFam3.chr4 27789055 43 + 88276631 I e mm10.chr14 24227250 1245 + 124902244 I e macFas5.chr9 75478362 908 - 133195287 I e rheMac3.chr9 73918024 759 - 130959383 I a score=25456.000000 s hg38.chr10_KI270825v1_alt 143538 21 + 188315 ggccgggcgcggtggctcagg s panTro4.chr10 76521025 21 + 133524379 ggccgggcgcggtggctcagg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76190151 21 - 133410057 ggccgggcgtggtggctcatg i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35126999 21 + 104879549 ggccgggcgtggtggctcatc i nomLeu3.chr18 C 0 C 0 s papAnu2.chr9 73343249 21 - 125196307 ggccgggcgcggtggctcaca i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72175901 21 - 125710982 ggccaggcgcggtggctcacg i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27789055 43 + 88276631 I e mm10.chr14 24227250 1245 + 124902244 I e calJac3.chr12 75635360 375 - 121768101 T e macFas5.chr9 75478362 908 - 133195287 I e rheMac3.chr9 73918024 759 - 130959383 I a score=304834.000000 s hg38.chr10_KI270825v1_alt 143559 207 + 188315 cctgtaatcccaacactttgagaggctgaggcgggtggattgcctgaggtcag------gagtttgagaccagcc------------------------tgaccaacatggtgaaaccccatctctactaaaaatacaaaaatt-------agccgggtgtggtggcaggtgcctgtaatcccagctactcgggaggctgaggaaggagaatcacttgaacccgggaggcagaagttgcagtga s panTro4.chr10 76521046 207 + 133524379 cctgtaatcccaacactttgagaggctgaggcgggtggattgcctgaggtcag------gagtttgagaccagcc------------------------tgaccaacatggtgaaaccccatctctactaaaaatacaaaaatt-------agccgggtgtggtggcaggtgcctgtaatcccagctactcgggaggctgaggaaggagaatcacttgaacccgggaggcagaagttgcagtga i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76190172 207 - 133410057 cctgtaatcccaacactttgagaggctgaggcgggtggattgcctgaggtcag------gagtttgagaccagcc------------------------tgaccaacatggtgaaaccccatctccactaaaaatagaaaaatt-------agccaggtgtggtggcaggtgcctgtaatcccagctactcgggaggttgaggaaggagaatcactagaacccggcaggcagaagttgcagtga i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35127020 207 + 104879549 cctgtaatcccaacactttgagaggctgaggggggtggattgcctgaggtcag------gagtttgagaccagcc------------------------tgaccaacatggtggaaccccatctctactaaaaatacaaaaatt-------agctgggtgtggtggcagatgcctgtaatcccagctactcgggaggctgaggaaggagaatcacttgaacccaggaggcagaagttgcagtga i nomLeu3.chr18 C 0 C 0 s papAnu2.chr9 73343270 206 - 125196307 cctgtaatcccagcactttgggaggctgaggtgggtagattgcctgaggtca-------gagttcgagaccagcc------------------------tgaccaatatggtgaaaccccatctctactaaaaatacgaaaatt-------agctgggtgtggtggcagatgcctgtaatcccagctactcaggaggctgaggaaggagaatcacttgaacccgggaggcacaggttgcagtga i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72175922 206 - 125710982 cctgtaatcccagcactttgggaggctgaggtggggagattgcctgaggtca-------gagttcgagaccagcc------------------------tgaccaacatggtgaaaccccatctctacaaaaaatacgaaaatt-------agctgggtgtggtggcagatgcctgtaatcccagctactccggaggctgaggaaggagaatcacttgaacccgggaggcacaggttgcagtga i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75634985 232 - 121768101 cctgtaatcccagctactcaggaggcttaggcaggagaactgcttgaacccaggaggcaggggttgcagcgagccaagatcatgccattgtgctccagttgggcaacaggagcaaactccatctcaa--aaaaacaaaaaaaGTTGCTCTAAgttgagtgtggtggtgtgcacctgt-atcccagctattcaggaggctgaggtgggagcatcact---------gagtttaaagctgtagtac i calJac3.chr12 T 375 C 0 e canFam3.chr4 27789055 43 + 88276631 I e mm10.chr14 24227250 1245 + 124902244 I e macFas5.chr9 75478362 908 - 133195287 I e rheMac3.chr9 73918024 759 - 130959383 I a score=84820.000000 s hg38.chr10_KI270825v1_alt 143766 54 + 188315 gccgagatcgc-----------gcca-ctgcactc---tagcctgggcgacaagag-cgaga-cttcatct s panTro4.chr10 76521253 54 + 133524379 gccgagatcgc-----------gcca-ctgcactc---cagcctgggcgacaagag-tgaga-ctccatct i panTro4.chr10 C 0 I 446 s ponAbe2.chr10 76190379 54 - 133410057 gccgagatcgc-----------acca-tcgcactc---cagcctgggcgacaagag-cgaga-cttcatct i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35127227 54 + 104879549 accgagatcgc-----------gcca-ctgcactc---cagcctgggcgacaagag-cgaga-cttcatct i nomLeu3.chr18 C 0 C 0 s macFas5.chr9 75479270 53 - 133195287 gccgagatcgc-----------gcca-ctgcactc---cagcttgggcgacagag--cgaga-ctccgtct i macFas5.chr9 I 908 C 0 s papAnu2.chr9 73343476 59 - 125196307 gccgagatcgt-----------accatttgcactccagcagcctgggcaacaagagccaaga-ctttgtct i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72176128 58 - 125710982 gccgagatcgc-----------acca-ttgcactccagcagcctgggcaacaagagccaaga-ctttgtct i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75635217 65 - 121768101 aaaatgatcacatctatgaatggcca-ctgcattt---cagtctgggtaacatgg--caagacccccatct i calJac3.chr12 C 0 C 0 e canFam3.chr4 27789055 43 + 88276631 I e mm10.chr14 24227250 1245 + 124902244 I e rheMac3.chr9 73918024 759 - 130959383 I a score=2100.000000 s hg38.chr10_KI270825v1_alt 143820 1 + 188315 c s ponAbe2.chr10 76190433 1 - 133410057 c i ponAbe2.chr10 C 0 I 8 s nomLeu3.chr18 35127281 1 + 104879549 c i nomLeu3.chr18 C 0 I 8 s macFas5.chr9 75479323 1 - 133195287 c i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73343535 1 - 125196307 c i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72176186 1 - 125710982 c i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75635282 1 - 121768101 c i calJac3.chr12 C 0 C 0 e canFam3.chr4 27789055 43 + 88276631 I e mm10.chr14 24227250 1245 + 124902244 I e rheMac3.chr9 73918024 759 - 130959383 I e panTro4.chr10 76521307 446 + 133524379 I a score=43229.000000 s hg38.chr10_KI270825v1_alt 143821 41 + 188315 ------aaaaaaaa-------aaaaa------------------------------------------aaaCTCTCCTGGCTCCTTGTCATTTTTA s panTro4.chr10 76521753 41 + 133524379 ------aaaaaaaa-------aaaaa------------------------------------------aaaaTCTCCTGGCTCCTTGTCATTTTTT i panTro4.chr10 I 446 C 0 s ponAbe2.chr10 76190442 41 - 133410057 ------aaaaaaaa-------aaaaa------------------------------------------aaaaTCTCCTGGCTCCTTGTCATTTTTA i ponAbe2.chr10 I 8 C 0 s nomLeu3.chr18 35127290 41 + 104879549 ------aaaaaaaa-------aaaaa------------------------------------------aaaTTCTCCTGGCTCCTTGTCATTTTTT i nomLeu3.chr18 I 8 C 0 s macFas5.chr9 75479324 24 - 133195287 -------aaaaaaataaaaataaaaa------------------------------------------taaat----------------------- i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73343536 40 - 125196307 -------aaaaaaa-------aaaaa------------------------------------------aaaatctgctggctccttgtcattttta i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72176187 44 - 125710982 -------aaaaaaa---aaaaaaaaa------------------------------------------aaaaTCTGCTGGCTCCTTGTCATTTTTT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75635283 89 - 121768101 aacaaaaagaaaaa-------gaaaaTGCTGCTCCTGATCCTGAGCAGACTTTTACTTTCCTGAAGGTAAAATCTCCTGTCTCCCTGTCATTTTAA i calJac3.chr12 C 0 C 0 e canFam3.chr4 27789055 43 + 88276631 I e mm10.chr14 24227250 1245 + 124902244 I e rheMac3.chr9 73918024 759 - 130959383 I a score=402563.000000 s hg38.chr10_KI270825v1_alt 143862 128 + 188315 AAAATAttttcatagagatgagttgtcactgtgttgcccgggctggtctcaaactcctgggctcaatcgatcctcccacctcggcctccaaaagtgctgggattacaggcatgagtcacctcatccag s panTro4.chr10 76521794 128 + 133524379 AAAATAttttcatagagatgagttgtcactgtgttgcccgggctggtctcaaactcctgggctcaatcgatcctcccacctcggcctccaaaagtgctgggattacaggcatgagtcacctcacccag i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76190483 128 - 133410057 AAAATAttttcatagagatgagttctcactgtgctgcccgggctggtctcaaactcctgggctcaatcgatcctcccacctcggcctccaaaagtgctgggattacaggcatgagtcacttgacccag i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35127331 128 + 104879549 AAAATAttttcatagagatgagttctcactgtgttgcccaggctggtctcaaactcctgggctcaattgatcctcccaccttggcttccgaaagtgctgggattacaggcatgagtcacctcacccag i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73918783 128 - 130959383 aaaatattttcatagagatgagttctcactgtgttgcccaggctggtctcaaactcctgggctcaatcgatcctcccacctcggcctcccaaagtgctaggattacaggcatgagccacctcacccag i rheMac3.chr9 I 759 C 0 s macFas5.chr9 75479348 128 - 133195287 aaaaTAttttcatagagatgagttctcactgtgttgcccaggctggtctcaaactcctgggctcaatcgatcctcccacctcggcctcccaaagtgctaggattacaggcatgagccacctcacccag i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73343576 128 - 125196307 aaaatattttcatagagatgagttctcactgtgttgcccaggctggtctcaaactcctgggctcaatcgatcctcccacctcggcctcccaaagtgctaggattacaggcatgagccacctcacccag i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72176231 128 - 125710982 AAAATAttttcatagagatgagttctcactgtgttgcccaggctggtctcaaactcctgggctcaatcgatcctcccacctcggcctcccaaagtgctaggattacaggcatgagccacctcacccag i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75635372 127 - 121768101 AAAATAttttcatagagatgagttatcactatctggcccaggctggtctcaaattcctgggctcaagcg-tcctcccaccttggcctcccaaagtgctgggattacacgcatgagccacctcacccag i calJac3.chr12 C 0 C 0 e canFam3.chr4 27789055 43 + 88276631 I e mm10.chr14 24227250 1245 + 124902244 I a score=277465.000000 s hg38.chr10_KI270825v1_alt 143990 83 + 188315 ccCATCTTCCTGTC---------TTATGTAGTATCACAAGCTCAATAAACACGTGGAATGGAGTGGTTGTTTT----------CCTA------GACCATTCATACTTT s panTro4.chr10 76521922 83 + 133524379 ccCATCTTCCTGTC---------TTATGTAGTATCACAAGCTCAATAAACACGTGGAATGGAGTGGTTGTTTT----------CCTA------GACCATTCATACTTT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76190611 83 - 133410057 ccCATCTTCCTATC---------TTATGTAGTATCATAAGCTCAATAAACACGTGGAACGGAGTGGTTGTTTT----------TCTA------GACCATTCATACTTT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35127459 83 + 104879549 ccCATCTTCCTGTC---------TTATGCAGTATCATAAGCTCAATAAACATGTGGAACGGAGTGGTTGTTTT----------TCTA------GACCATTCATACTTT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73918911 83 - 130959383 ccCATCTTCCTGTC---------TTATGTGGTATCATAAGCTCAATAAACACAAGGAATGGAGTGGTGGTTTT----------TCTA------GACCATTCATACTTT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75479476 83 - 133195287 ccCATCTTCCTGTC---------TTATGTGGTATCATAAGCTCAATAAACACAAGGAATGGAGTGGTGGTTTT----------TCTA------GACCATTCATACTTT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73343704 83 - 125196307 cccatcTTCCTGTC---------TTATGTGGTATCATAAGCTCAATAAACACAAGGAATGGAGTGGTTGTTTT----------TCTA------GACCATTCATACTTT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72176359 83 - 125710982 ccCATCTTCCTGTC---------TTATGTGGTATCATAAGCTCAGTAAACACAAGGAATGGAGTGGTTGTTTT----------TCTA------GACCATTCATACTTT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75635499 83 - 121768101 ccCATCTTCCTGTC---------TTATATGGTATCAAAAGCTCAATAAACACAAGGAATGGAGTGGCTGTTTT----------TCTT------GACCATTCATACCTT i calJac3.chr12 C 0 C 0 s canFam3.chr4 27789098 108 + 88276631 CCCATCTCCCCATTCAGTTCACACTACACGGCATCACATGATCAATGAACACATGGAACAGAGCTGTTTTCTTAATGAACTGACCTACAAGGTGACCACCCATACTTT i canFam3.chr4 I 43 C 0 e mm10.chr14 24227250 1245 + 124902244 I a score=1855817.000000 s hg38.chr10_KI270825v1_alt 144073 534 + 188315 TTCCACTATGGCCAAGATGAGAATATGGGTTTTTACAAGCACTGCTGATGCATATTCACAATGCCATCTTTAAATCA--AGTGTTTGCGCACCTCTT-CCT---TCCACAATCACCTAGCTAATCATCCTTGTCCCTACGTTAAAAACACCCTTGTCCCTGCTGTGTCAACTATCACATGACCTGAAGTTGTCCCTCCC--CACCTGGTGACCTTAACAGCTATGTAACAGCATGGGTAACTCTTTACCAAGACCATTTCTGGGTGAACGACCTGCCTGAGGTTGCCAGCTCAGCCAAGGCACA-AGGTGCCA------C-------AGAGTTGAGTGATGGAGCACAGCCAAGACCCTCCCCTCAAAGACAGCACTAGGATGGGAAAGAGATGtatttatttcctcttctctctctcgtcttatttatttccttttattcccatttccc------tcccct-------ca-cccacagtcaaccattctcttgtgttaatctgttcatattcttgcaagatgggtattgttctatatcagcaatct-acataatagc--actgcaccatcca s panTro4.chr10 76522005 534 + 133524379 TTCCACTATGGCCAAGATGAGAATATGGGTTTTTACAAGCACTGCTGATGCATATTCACAATGCCATCTTTAAATCA--AGTGTTTGCGCACCTCTT-CCT---TCCACAATCACCTAGCTAATCATCCTTGTCCCTATGTTAAAAACACCCTTGTCCCTGCTGTGTCAACTATCACATGACCTGAAGTTGTCCCTCCC--CACCTGGTGACCTTAACAGCTATGTAACAGCATGGGTAACTCTTTACCAAAACCATTTCTGGGTGAACGACCTGCCTGAGGTTGCCAGCTCAGCCAAGGCACA-AGGTGCCA------C-------AGAGTTGAGTGATGGAGCACAGCCGAGACCCTCCCCTCAAAGACAGCACTAGGATGGGAAAGAGATGtatttatttcctcttctctctctcgtcttatttatttccttttattcccatttccc------tcccct-------ca-cccacagtcaaccattctcttgtgtttatctgttcatattcttgcaagatgggtattgttctatatcagcaatct-acataatagc--actgcaccatcca i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76190694 534 - 133410057 TTCCACTATGGCCAAGATGAGAATATGGGTTTTTGCAAGCACTGCTGATGCATACTCACAATGCCATCTTTAAATCA--AGTGTTTGTGCACCTCTT-CCT---TCCACAATCACCTAGCTAATCATCCTTGTCCCTACATTAAAAACACCCTTGTCCCTGCTGTGTCAACTATCACATGAGCTGAAGTTGTCCCTCCC--CACCTGGTGACCTTAACAGCTACGTAACAGCATGGGTAACTCTTCACCAAGACCATTTCTGGGTGAACGACCTGCCTGAGGTTGCCAGCTCAGCCAAGGCACA-AGGTGCCA------C-------AGAGCTGAGTGATGGAGCACAGCCGAGACCCTCCCCTCAAAGGCAGCACTAGGATGGGAAAGAGATGtatttatttcctcttctctctctcatcttatttatttccttttattcccatttccc------ttccct-------ca-cccacagtcaaccattctcttgtgtttatctgttcgtgttcttgcaagatggatattgttctatatcagcaatct-acataatagc--actgcaccatcca i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35127542 534 + 104879549 TTCCACTATGGCCAAGATGAGAACATGGGTTTTTGCAAGCACTGCTGATGCATATTCACAATGTCATCTTTAAATCA--AGTGTTTTCGCACCTCTT-CCT---TCCACAATCACCTAGCTAATCATCTTTGTCCCTACATTAAAAACACCCTTGTCCCTGCTGTGTTAACTATCACATGACCTGAAGTTGTCCCTCCC--CACCTGGTGACTTTAACAGCTACGTAACAGCATGGGTAACTCTTTACCAAGACCATTTCTGGGTGAACGACCTGCCTGAGGTTGCCAGCTCAGCCAAGGCACG-AGGTGCCA------C-------AGAGCTGAGTGATGGAGCACAGCCAAGATCCTCCCCTCAAAGACATCACTAGGATAGGAAAGAGATGtatttatttcctcttctctctctcgtcttatttatttccttttattcccatttccc------ttctct-------ca-cccacagtcaaccattctcttgtgtttatctgttcgtgttcttgcaagacgggtattgttctatatcagcaatct-acataatagc--actgcaccatcca i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73918994 529 - 130959383 TTTCACTATGGCCAAGATGAGAACATGGGTTTCTGCAAGCACTGCTGATGCATATTTCCAATGCCATCTTTAAATCA--AGTGTTTGCGCACCTCTT-CCT---TCCACAATCAC----CTAATCATCCTTGTCCCTACATTAAAAACA-CCTTGTCCCTACTGTGTCAACTGTCACATGACCCGAAGTTGTCCCTCCC--CACCTGGTGACTTTAACAGCTACGTAACGGCATGGTTAACTCTTTACCAAGACCATTTCTGGGTGAACGACCTGCCTGAGGTTGCCAGCTCAGCCAAGGCACA-AGGTGCCA------C-------AGAACTGAGTGATGGAGCACAGCCGAGGCCCTCCCCTCAAAGACAGCTCTAGGATGGGAAAGAGATGCATTTCTTTCCTCTTccctctctcgtcttatttatttccttttattcccatttccc------ttccct-------ca-cccacagtcaaccattctcgtgtgtttatcttttcgtgttcttgcaagatgggtattgttctatatcagcaatct-acataatagc--actgcaccatcca i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75479559 529 - 133195287 TTTCACTATGGCCAAGATGAGAACATGGGTTTCTGCAagcactgctgatgcatatttccaatgccatctttaaatca--agtgtttgcgcacctctt-cct---tccacaaTCAC----CTAATCATCCTTGTCCCTACATTAAAAACA-CCTTGTCCCTACTGTGTCAACTGTCACATGACCCGAAGTTGTCCCTCCC--CACCTGGTGACTTTAACAGCTACGTAACGGCATGGTTAACTCTTTACCAAGACCATTTCTGGGTGAACGACCTGCCTGAGGTTGCCAGCTCAGCCAAGGCACA-AGGTGCCA------C-------AGAACTGAGTGATGGAGCACAGCCGAGGCCCTCCCCTCAAAGACAGCTCTAGGATGGGAAAGAGATGCATTTCTTTCCTCTTccctctctcgtcttatttatttccttttattcccatttccc------ttccct-------ca-cccacagtcaaccattctcgtgtgtttatcttttcgtgttcttgcaagatgggtattgttctatatcagcaatct-acataatagc--actgcaccatcca i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73343787 523 - 125196307 TTTCACTATGGCCAAGATGAGAACATGGGTTTTCGCATGCACAGCTGATGCATATTCCCAATGCTATCTTTAAATCA--AGTGTTTGTGCACCTCTT-CCT---TCCACAATCAC----CTAATCATCCTTGTCCCTACATTAAAAACA-CCTTGTCCCTACTGTGTCAACTGTCACATGACCCGAAGTTGTCCCTCCC--CACCTGGTGACTTTAACAGCTATGTAACAGCATGGTTAACTCTTTACCAAGACCATTTCTGGGTGAACGACCTGCCTGAGGTTGCCAGCTCAGCCAAGGCACA-AGGTGCCA------C-------AGAACTGAGTGACGGAGCACAGCCGAGGCCCTCCCCTCAAAGACAGCTCTAGGATGGGAAAGAGAtgcatttctttcctcttccctctctcgtcttatatatttcctttaattcccatttccc------ttcccc-------ca-cccacaaTCAACCATTCTCGTGTGTTTATCTTTTCGTGTTCTTGCAAGACGG-----GTTCTATATCAGC-ATCT-ACATAATAGC--ACTGCACCATCCA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72176442 523 - 125710982 TTTCACTATGGCCAAGATGAGAACATGGGTTTTTGCATGCACAGCTGATGCATATTCCCAATGCTATCTTTAAATCA--AGTGTTTGCGCACCTCTT-CCT---TCCACAATCAC----CTAATCATCCTTGTCCCTACATTAAAAACA-CCTTGTTCCTACTGTGTCAACTGTCACATGACCCGAAGTTGTCCCTCCC--CACCTGGTGACTTTAACAGCTACGTAACAGCATGGTTAACTCTTTATCAAGACCATTTCTGGGTGAACAACCTGCCTGAGGTTGCCAGCTCAGCCAAGGCACA-AGGTGCCA------C-------AGAACTGAGTGATGGAGCACAGCCGAGGCCCTCCCCTCAAAGACAGCTCTAGGATGGGAAAGAGATGCATTTCTTTCCTCTTCCCTCTCTCATCttatttatttcctttaattcccatttccc------ttccct-------ca-cccacagtcaaccattctcgtgtgtttatcttttcgtgttcttgcaagacgg-----gttctatatcagc-atct-acataatagc--acttcaccattca i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75635582 532 - 121768101 TTCCACTATAACCAAGATGTGGACATGGGTTTTTACAAGCACTGCTGATGCATATTTACAATGCCATGTTTAAATAA--AGTGTTGGCGCACCTCTT-CCC---TCCACATTCACCTAGGTAACCATTCTTGTTCCTATGTTAAAAACACCCTTGTCCCTACTGTGTCAACTGTCACATGACTCGAAGTTGTCCCTCCC--TACCTGGTGACTTTAACAGCTCCATAACCACATGGGTAACTCTTTACCAAGGCCATTTCTGGGTGAACGACCTGCCTGAGGTTGCCAGCTCAGCCAAGGCACC-AGGTGCCA------C-------AGAACTGAGTGACGGAGCACAGCCAAGGCCCTTCCCTCAATGACGGCACTAGGACAGGAAAGAGATATGTTTCTTTCCTCTTCC--CTCCCATCTTACttatttccttttattcctgtttctt------ttccct-------ca-cccacagtcaaccattttcttgtgttcatcttttcatgttcttgcaaaatgggtattattttatatcagcaatct-acataacagc--actgccccatcca i calJac3.chr12 C 0 C 0 s mm10.chr14 24228495 484 + 124902244 TTCCATTATGGCCTCCATGAGAACTCGGGTTT-TGTAAGACCAGGTGACGCATGTTCACAGTGCCAGGTTTAAAGTG--A-CACTGGTTCACTTCTC-GCTAGATCTATAGTCACCTGGATGATTATCT---------------AAACGCTTTTGTTGCCATTGCATCTAATGTCCGGCAAACCACAGCCACTCCACCCATCTTCTGGGAGGCTTAAT----------CAGCATGGCCAGCACT--AGTGAGGCCCCTTTGGTATGAGCAATCTGCCTGAGGTTGCCAGCCCAGCCCAGCCCCACAGACGCCACGGGGTC-------AGAGGCTAGTAACAGGGCAAAGCTGAGGCCCT-CTCTGGAAGACAGCAAC------TGAAAGCAATGTGTTTCTTTCCCCTTGCTT-----------TTTATTTCCTCTTCTGCCCAGTTCCC------TGCCTA-------CAGCACAGATGCAA-------------------GGCTTGTGTCCTTGCAAGGTAGGCGGTGTTTGTTATCAGACATCTCACCCGATTGCTTACTGCATCACCCA i mm10.chr14 I 1245 I 199 s canFam3.chr4 27789206 506 + 88276631 -CCCAATATGACCAAGATGAGAACGTGGGGTTTTGCAAGCATTGCTGACGCCTCTTCACAACACGCGGTTTAAGTCAGCACTGTT----CACCTCTTACCT---ACCACAATTACCTAGATGCTTATT---------------AAAACACCTGCATCCCTACCGAGTCCACTGTTCCGTGAAC---AGCTGCCCCTGCC--C-------------AGTGGCGCAGTACCAGTATGGGTAACTCTTCTCTGAGGCCACTTTTGGGTGAACCATCTGCTTGAGGTTGCCAGCTTGGCCAAGACACACAGATGCCA------CACCACCAAAAGCTGAGCAATCAAGAACA---AAGGCCCTTCCCTCAAAGACAGCAGCCTG-TAGGAAAAAG-TGAGGTTCTTTCCTC---CCCCTCTCAT----Tttatttccttttattcccatttccctgaccattctcttcctgcaca-tccataggcaaccattcctttgtgtttat---gttgtgttcttgcgaaatgggtatta-tctgtatgattaattt-acataatagc--actgtattatcca i canFam3.chr4 C 0 C 0 a score=120980.000000 s hg38.chr10_KI270825v1_alt 144607 35 + 188315 tgctctatttcttatgttttcactgagcactgtgc s panTro4.chr10 76522539 35 + 133524379 tgctctatttcttatgttttcactgagcactgtgc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76191228 35 - 133410057 tgctctatttcttatgttttcactgagcactgtgc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35128076 35 + 104879549 tgctctatttcttatgttttcactgagcactgtgc i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73919523 35 - 130959383 tgctctatttcttacattttcactgagcactgtgc i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75480088 35 - 133195287 tgctctatttcttacattttcactgagcactgtgc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73344310 35 - 125196307 TGCTCTATTTCTTACGTTTTCACTGAGCACTGTGC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72176965 35 - 125710982 tgctctatttcttacgttttcactgagcactgtgc i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75636114 35 - 121768101 tgctctatttcttgcgttgtcactgagcactgtcc i calJac3.chr12 C 0 C 0 s canFam3.chr4 27789712 31 + 88276631 -tctcggt---ttactttgtcactgggcactgtac i canFam3.chr4 C 0 C 0 e mm10.chr14 24228979 199 + 124902244 I a score=1060323.000000 s hg38.chr10_KI270825v1_alt 144642 306 + 188315 atttaaatacatc-atgctgcctgccacgtgtgcttctcaccagtcacttggaattgctgca--agggactacagactcatacccacccattatacccatt-tgctctgca-ggaatggacatcca---gctctacctcaccacc-acaaacaacactgcagtgaacaccctggaccttcccctta-ggacctgcatgagaacct----ggggaactgacacccatgggaggggcttctgggtcagggctttgct---ggtaccctg----------ccagagg---ctccaggacagctgcaactgcaaaggcaagagttcctgcatccccacac s panTro4.chr10 76522574 306 + 133524379 atttaaatacatc-atgctgcctgccacgtgtgcttctcaccagtcacttggaattgctgca--agggactacagactcatacccacccattatacccatt-tgctctgca-ggaatggacatcca---gctctacctcaccacc-acaaacaacactgcagtgaacaccctggaccttcccctta-ggacctgcatgagaacct----ggggaactgacacccatgggaggggcttctgggtcagggctttgct---ggtaccctg----------ccagagg---ctccaggacagctgcaactgcaaaggcaagagttcctgcatccccacac i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76191263 306 - 133410057 atttaaatacatc-atgctgcctgccacgtgtgcttctcaccagtcacttggaattgctgca--agggactacagactcatactcacccattatacccatt-tgctctgca-ggaatggacatcca---gctctacctcaccacc-acaaacaacactgcagtgaacaacctggaccttcccctta-ggacctgcatgagaacct----ggggaactgacacccacgggaggggcttctgggtcagggctttgct---ggtaccctg----------ccagagg---ctccaggacagctgcacctgcaaaggcaagagttcctgcatccccacac i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35128111 305 + 104879549 atttaaatacatc-atgctgcctgccacgtgtgcttctcaccagtcacttggaattgctgcg--aggaactacagactcatacccacccattatacccatt-tgctctgca-ggaatggacatcca---gctctacctcaccacc-acaaacaacactgcagtgaacaccctggacctt-ccctta-ggacctgcatgagaacct----ggggaattgacacccacgggaggggcttctgggtcggggctttgct---ggtaccctg----------ccagagg---ctccaggacagctgcacctgcaaaggcaagagttcctgcatccccacac i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73919558 306 - 130959383 atttaaatccatc-acactgcctgccacgtgtgcttctcaccagtcactgggaattgctgcg--agggactatggactcatacccacccattatacccatt-agctctgca-ggaatggacatcca---gctctacctcaccacc-acaagcaacactgcagtgaacaccctggaccttcccctta-ggacctgcatgagaacct----ggggaactgacacccacaagaggggcttctgggtcggggctttgct---ggtaccctg----------ccagagg---ctccaggacagctgcacctgcaaaggcaagagtttctgcatccccacac i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75480123 306 - 133195287 atttaaatccatc-acactgcctgccacgtgtgcttctcaccagtcactgggaattgctgcg--agggactatggactcatacccacccattatacccatt-agctctgca-ggaatggacatcca---gctctacctcaccacc-acaagcaacactgcagtgaacaccctggaccttcccctta-ggacctgcatgagaacct----ggggaactgacacccacaagaggggcttctgggtcggggctttgct---ggtaccctg----------ccagagg---ctccaggacagctgcacctgcaaaggcaagagtttctgcatccccacac i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73344345 306 - 125196307 ATTTAAATCCATC-ACACTGCCTGCCACGTGTGCTTCTCACCAGTCACTGGGAATTGCTGCG--AGGGACTATGGACTCATAACCACCCATTATACCCATT-AGCTCTGCA-GGAATGGACATCCA---GCTCTACCTCACCACC-ACAAGCAACACTGCAGTGAACACCCTGGACCTTCCCCTTA-GGACCTGTATGAGAACCT----GGGGAATTGACACCCACAAGAGGGGCTTCTGGGTCGGGGCTTTGCT---GGTACCCTG----------CCAGAGG---CTCCAGGACAGCTGCACCTGCAAAGGCAAGAGTTCCTGCATCCCCACAC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72177000 306 - 125710982 atttaaatccatc-acactgcctgccacgtgtgcttctcaccaggcgctgggcattgctgca--agggactatggactcatacccacccattatacccatt-agctctgca-ggaatggacatcca---gctctacctcaccacc-acaagcaacactgcagtgaacaccctggaccttcccctta-ggacctgcatgagaacct----gggaaactgacacccacaagaggggcttctgggtcggggctttgcc---ggtaccctg----------ccagagg---ctccaggacagctgcacctgcaaaggcaagagttcctgcatccccacac i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75636149 307 - 121768101 acttaaatgcatcaacgctgcctgccacgtgtgcttcttgccagtcacttggaactgctgca--agggactatgggctcgcacccgcccatcatacccatt-tgctctgca-ggaatggacatcca---gctctacctcatcacc-aaatacaacattgcagtgaacaccctggaccttctcctga-ggacctgcaagagaacct----ggggaattcacacccacaagaggggcttctgggtcagagctttgct---ggtacccta----------ccagacg---ctccagaagagctacaccagcaaggacaagagttcctgcatccccacac i calJac3.chr12 C 0 C 0 s mm10.chr14 24229178 328 + 124902244 ATTTTAAGGGACA-CTGTCGCCTATCATGTATGCATCTCACCTGTCCCATGGTGCTACCACCTTGGTGACCAGAAGCTCAAACTCATCCATC-TGCATATTCCACTCTGGA-GGGATGGACACCCACCCACCCTGCCTCCTCTCCAACACAGCACATGGCAATG--TACCCCGTATCTTCCCCTCC-AGA-CTGCAGGAGAGCCCGGTGGGGGCACTGAATTTCAGGACAGAAACCTTTGGG-CAAAGCTTTGGTGAAGGCATTCTGAGGCAGTAATTCTGAAGTAATTCTGGGGCTGCCCCAGTAGCTGAGGCAGGAATTTCTATAGCCCTATTG i mm10.chr14 I 199 C 0 s canFam3.chr4 27789743 271 + 88276631 tttaagatctatc-------cctgggccacgagcgtctcctcagtcatttcaa----ctgct--gtggattgtgggtccgggccca-ccgctgctcgcatc-agctctccctagaatggaca-cTA-----------------CC-CTGTAAGGCACTGCAGTGAAC--------CTGTCCCCTCAGGGACCTGTGTGAGAGGCT----GGGCGATCTCCGCCCAGGAG-GAGGCTACAGGGTCAGGGCTTTGTG---GGGACCCTG----------GCAGAGG---CTCCAGGATGGCTGCACCAGCAGGGCTAAG--TTTCTGTACCCCAACGC i canFam3.chr4 C 0 I 215 a score=46639.000000 s hg38.chr10_KI270825v1_alt 144948 14 + 188315 ccactgctgatagg s panTro4.chr10 76522880 14 + 133524379 ccactgctgatagg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76191569 14 - 133410057 ccactgctgataga i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35128416 14 + 104879549 ccactgctgataga i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73919864 14 - 130959383 ccactgctgataga i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75480429 14 - 133195287 ccactgctgataga i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73344651 14 - 125196307 CCACTGCTGATAGA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72177306 14 - 125710982 ccactgctgataga i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75636456 14 - 121768101 ccactgctgataga i calJac3.chr12 C 0 C 0 s mm10.chr14 24229506 13 + 124902244 CCACGG-TCACCGA i mm10.chr14 C 0 C 0 e canFam3.chr4 27790014 215 + 88276631 I a score=698243.000000 s hg38.chr10_KI270825v1_alt 144962 199 + 188315 cagcatccagctttctagttcccaccagtctaagaggtgaaacaggatc-gagctcaaggttgtgttCCAGTATGGATTCTTACCAAACCTGACTGAACCGTACCTGCTAAGGGAATGGCAGGAAAAGCACTTGT-ACCGTAAGCATCACTG---GTGTGAAATGGAAACAACTGCTCATTGAT--AAGTCTCCACTGTGAGGCCT s panTro4.chr10 76522894 198 + 133524379 cagcatccagctttctagttcccaccagtctaagaggtgaaacaggatc-gagctcaaggttgtgttCCAGTATGGATTCTTACCAAACCTGACTGAACCGTACCTGCTAAGGGAATGGCAGGAAA-GCACTTGT-ACCCTAAGCATCACTG---GTGTGAAATGGAAACAACTGCTCATTGAT--AAGTTTCCACTGTGAGGCCT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76191583 199 - 133410057 cagcatccagctttctagttcccaccagtctaagaggtgaaacaggatc-gagctcaaggttgtgttCCAGTATGGATTCTTACCAAACCCGACTGAACCGTACCTGCTAAGGGAATGGCAGGAAAAGCATTTGC-ACAGTAAGCATCACTG---GTGTGAAATGGAAACAACTGCTCATTGAT--AAGTCTCCACTGTGAGGCCT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35128430 198 + 104879549 cagcatccagctttctagttcccaccagtctaagaggtgaaacaggatc-aagctcaaggttgtgttCCAGTATGGATTCTTACCAAACCTGACTGAACCGTACCTGCTAAGGGAATGGCAGGAAAAGCATTTGC-ACAGTAAGCATCACTG---GTGTGAAATGGAAACAACTGCTCATTG-T--AAGTCTCCACTGTGAGGCCT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73919878 198 - 130959383 cagcatccagctttctagttctcaccagtctaagaggtgaaacaggat--gagctcaaggttgtgttCCAGTATGGATTCTTACCAAACCTGGCTGAACCATACCTGCTAAGGGAATCGTAGGAAAAGCATTTGC-ACAGTAAGCGTCACTG---GTGTGAAATGGAAACAACTGCTCATTGAT--AAGTCTCCACTGTGAGGCCT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75480443 198 - 133195287 cagcatccagctttctagttctcaccagtctaagaggtgaaacaggat--gagctcaaggttgtgttCCAGTATGGATTCTTACCAAACCTGGCTGAACCATACCTGCTAAGGGAATCGTAGGAAAAGCATTTGC-ACAGTAAGCGTCACTG---GTGTGAAATGGAAACAACTGCTCATTGAT--AAGTCTCCACTGTGAGGCCT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73344665 198 - 125196307 CAGCATCCAGCTTTCTAGTTCTCAGCAGTCTAAGAGGTGAAACAGGAT--GAGCTCAAGGTTGTGTTCCTGTATGGACTCTTACCAAACCTGGCTAAACCATACCTGCTAAGGGAATGGTAGGAAAAGCATTTGC-ACAGTAAGCATCACTG---GTGTGAAATGGAAACAACTGCTCATTGAT--AAGTCTCCACTGTGAGGCCT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72177320 198 - 125710982 cagcatccagctttctagttctcaccagtctaagaggtgaaacaggat--gagctcaaggttgtgttCCAGTATGGACTCTTACCAAACCTGGCTGAACCATACCTGCTAAGGGAATGGTAGGAAAAGCATTTGC-ACAGTAAGCATCACTG---GTGTGAAATGGAAACAACTGCTCATTGAT--AAGTCTCCACTGTGAGGTCT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75636470 199 - 121768101 caccttccagctttctagttcccaaaaatctaagaggtgaaacaggatc-gagctcaaggttgtgttccaatatggattCTTACCAAACCTGCCTGAACCATGCCTGCTAGAGGAATGGCAAGAAAAGCATTAGC-ACATTATGCATCTATG---GTGTGAAACAGAAACAACTGCTCATTGAT--AAGTCTCCACTGTGAGGCCT i calJac3.chr12 C 0 C 0 s mm10.chr14 24229519 173 + 124902244 CAATTTCCA----TCCATTCCCTGCCAGTTTCAGTGACAGGAAAGGGCCAGAGCTCAAGGCTTAAGTTCAGTGTTGCTCCTCACCACACC------GACC----------AGAGGACAGCAAGAGAGGCATCTGT--CATGGAGAAGCTCGGGCAGCACAGAGCGGAAGCCACAG-----------AAGCCTCCATTGTTGGGCCT i mm10.chr14 C 0 I 1030 s canFam3.chr4 27790229 189 + 88276631 cAGCATCCAGCTTTCTCGTTGCTGCCAGCCCAAGAGGTGGAAAGGAAGA-GAGTTCACAG-------------TGGATTCTTCACAAACCTGTGAGAACCACACCTGCTAGGAGAACAGCTGGCAAGGCATTTGCTACAGTGAGCGTCAATG---GCACTGACTGGAAACAATTGCTCATGAATACAAATCTCCACTGGGAGACCT i canFam3.chr4 I 215 C 0 a score=771829.000000 s hg38.chr10_KI270825v1_alt 145161 296 + 188315 CACTTTCTTGAATCGTCAGGGACTTCTGGAACACAAATGTCATGCACTGGCCTACAAAATGCCATCAA---TCCCACCTTCTCCCACTGGCTGAGGCTCCTCCCAAGGAGGTCGACTGT-TCAGGATGGGCAGCAACAGTGCTGCGCTCCACttttt---------------tttttttttttttttttcctgaga-tggagtctcactctgttgcccaggctggagtgcagtggcacaatcttggctcactccaccatccacctccccagttcaagcgactctcctatctcagcctcccgagcagctggaagtac s panTro4.chr10 76523092 263 + 133524379 CACTTTTTTGAATCGTCAGGGACTTTTGGAACACAAATGTCATGCACTGGCCTACAAAATGCCATCAA---TCCCACCTTTTCCCACTGGCTGAGGCTCCTCCCAAGGAGGTCGACTGT-TCAGGATGGGCAGCAACAGTGCTGCGCTCCACttttt---------------tttttttttttt-----cctgaga-tggagtctcactctgttgcccaggctggagtgcagtggcacgatcttggctcactccaccatccacctccccannnnnnnnnn----------------------------ggatgtac i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76191782 291 - 133410057 CACTTTCTTGAATCGTCAGGGACTACTGGAACACAAATGTCATGCACTGGCCTACAAAATGCCATCAA---TCCCACCTTTTCCTACCGGCTGAGGCTCTTCCCAAGGAGGTCGACTGT-TTAGGATGGGCAGCAACAGTGCTGCGCTCCACttttt---------------tttttttttttt-----tttgaga-tagagtctcactctgttgcccaggctggagtgcagtggcgcaatcttggctcactccaccatccacctccccagttcaagcgactctcctgtctcagcctctcgagcagctgggagtac i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35128628 287 + 104879549 CACTTTCTTGAACTGTCAGGGACTACTGGAACACAAATGTCATGCACTGGCCTATAAAATGCCATCAA---TCCCACCTTCTCCCACTGGCTGAGGCTCCTCCCGAGGAGGTCGACTGT-TCAGGATGGGCAGCAACGGTGCTACGCTCCACttttt---------------tttttttt---------tttgaga-tggagtctcactctgttgcccaggctggagtgcagtggcgcgatcttggctcactccaccatccacctccccagttcaagcgactctcctgtctcagcctcccgagcagctgggagtac i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73920076 306 - 130959383 CACTTTCTTGAATCGTCAGGGACTGCTGGAACACAAATGTCATGCACTGGCCTGCAAAATGCCATCAA---TCCCACCTTCTCCCACTGGCTGAGGTTCCTCCCAAGGAAGTCGACTGT-TAGGGGTGGGCAGCAACAGTGCTGCACTCCACTTTGTtttttgtttttttgttttttttttttg-----cctgata-tggagtctccctcggttgcccaggctggagtgcagcggcacaatcttggctcactccaacatccaccgccccagttcaagcaactctcctgtctcagcctcctgagtagctgggagtac i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75480641 305 - 133195287 CACTTTCTTGAATCGTCAGGGACTGCTGGAACACAAATGTCATGCACTGGCCTGCAAAATGCCATCAA---TCCCACCTTCTCCCACTGGCTGAGGTTCCTCCCAAGGAAGTTGACTGT-TAGGGGTGGGCAGCAACAGTGCTGCACTCCACTTTGttttttgtttttttg-tttttttttttg-----tctgaga-tggagtctccctcggttgcccaggctggagtgcagcggcacaatcttggctcactccaacatccaccgccccagttcaagcaactctcctgtctcagcctcctgagtagctgggagtac i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73344863 288 - 125196307 CACTTTCTTGAATCGTCAGGGACTGCTGGAACACAAATGTCATGCACTGGCCTGCAAAATGCCATCAA---TCCCACCTTCTCCCACTGGCTAAGGTTCTTCCCAAGGAAGTCGACTGT-TCGGGGTGGGCAGCAACAGTGCTGCActccactt------------------ttttgttttttg-----tctgaga-tggagtctccctcggttgcccaggctggagtacagcggcacaatcttggctcactccaacatCCACCGCCccagttcaagcaactctcctgtctcagcctcctgagtagctgggagtac i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72177518 298 - 125710982 CACTTTCTTGAATCGTCAGGGACTGCTGGAACACAAATGTCATGCACTGGCCTGCAAAATGCCATCAA---TCTCACCTTCTCCCACTGGCTGAGGTTCCTCCCAAGGAAGTCGACTGT-TCGGGGTGAGCAGCAACAGTGTTGCACTTCACtttgttttgtt---------ttgttttttttg-----tctgagattggagtctccctcggttgcccaggctggagtgcagtggcgtaatcttggctcactccaacatccaccgctccagttcaagtgactctcctgtctcagcctcccgagtagctgggagtac i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75636669 293 - 121768101 CACTTTCTTGAATTGTCAGGGACTGCT-GAACACAAACGTCATGCACCGGCCTGCAAAATGCCGTCAA---TCCCACCTCCTCC-ACTGGCTGAGGCTCCTCCCAAGAAGGTCAACTGT-GCAGGGTGGGCAGCA---GTGCAAAGCTCCACtttctttctttc--------tcttttttttct-----tttgaga-tgaagtctcactctgttgccctggctggagtgcagtggtgcaatcttggttcattgcaacatccatctccccagttcaaatgactctcctgactcagcctcccaagtagctgggagtac i calJac3.chr12 C 0 C 0 s canFam3.chr4 27790418 136 + 88276631 CGCTGCCCTGAGCTGTCACAGCCTGCTGGAGCATAAACATCATGCACCGGCTTGCAAAATGCCATGGAATTGCCTGCTCTGCTCGGTTGGCAGAGGGTCCTCCCGAGGGAGCCTACTGTGGAGGGGTGGGAAGCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ i canFam3.chr4 C 0 C 0 e mm10.chr14 24229692 1030 + 124902244 I a score=347577.000000 s hg38.chr10_KI270825v1_alt 145457 119 + 188315 aggcacgtaccaccatgcccagctaatttttatatttttcagtagacatggggtttcactatgttggccaggttggccttgaactcccgacctcaggtgatccacctgactcaggctcc s panTro4.chr10 76523355 117 + 133524379 aggcacgtaccaccatgcccagataattattatattttttagtagacatggggtttcact--gttggccaggttggccttgaactcccgacctcaggtgatccacctgactcaggctcc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76192073 119 - 133410057 aggcacgtaccaccatgcccagctaatttttctattttttagtagacatggggtttcactatgttggccaggttggccttgaactcctgacctcaggtgatccacctgactcaggctcc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35128915 119 + 104879549 aggcacgtaccaccatgcccagctaatttttatattttttagtagacatggggtttcactatgttggccaggttggccttgaactcctgacctcaggtgatccacctgactcaggctcc i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73920382 119 - 130959383 aggcacgtaccaccacgcgcagctaatttttatattttttagcagacatagggtttcacgacgtgggcctggttggccctgaactcctgccctcaggtgatccccccgactcgggctcc i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75480946 119 - 133195287 aggcacgtaccaccacgcccagctaatttttatattttttagcagacatagggtttcactacgttggcctggttggccctgaactcctgacctcaggtgatccacccgactcgggctcc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73345151 119 - 125196307 aggcatgtaccaccacgcccagctaatttttacattttttagtagacatggggtttcactacgttggcctggttggccttgaactcctgacctcaggtgatccacccgactcgggcccc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72177816 119 - 125710982 aggcacgtaccaccacgcccagctaatttttacattttttagtagacatggggtttcactacgttggcctggttggccttgaactcctgacctcaggtgatccacccgactcgggctcc i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75636962 119 - 121768101 aggtacccaccaccacgcccagctaatttttatattttttagtagagatggagtttcaccatgttggccaggttggccttaaactcctgacttcaggtgatcctcccaccttgacctcc i calJac3.chr12 C 0 C 0 e canFam3.chr4 27790554 0 + 88276631 C e mm10.chr14 24229692 1030 + 124902244 I a score=745495.000000 s hg38.chr10_KI270825v1_alt 145576 226 + 188315 cagagtgctgggattacaggtatgagccaccgcgcctggccCAGAGCTC-CACTTTTTTATTTGCAATCACATCATCCttctattgatgac----------ttacctgcagctcacactacacaccactcaccacgtgatctgacaaca-ctgaagcagtctatacctgttcaatgagTACTAGCAAGGTCAAGTTGCTCTAAAGGTTGCTAAACACT-----CAATCTCTGTGCTTGcttac s panTro4.chr10 76523472 225 + 133524379 cagagtgctgggattacaggtatgagccaccgcgcctggccCAGAGCTC-CACTTTTTTATTTGCAATCACATC-CCCttctattgatgac----------ttacctgcagctcacactacacaccactcaccacatgatctgacaaca-ctgaagcagtctatacctgttcaatgagtactagcaaggtcaagttgctctaaaggttgctaaacact-----caatctctgtgcttgcttac i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76192192 226 - 133410057 cagagtgctgggattataggcatgagccaccgcgcctggccCAGAGCTC-CACTTTTTTATTTGCAATCACATCATCCttctattgatgac----------ttacctgcagctcacactacacaccattcaccacatgatctgacaaca-ctgaagcagtctatacctattcaatgagtaccagcaaggtcaagttgctctaaaggttgctaaacact-----caatcgctgtgcttgcttac i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35129034 226 + 104879549 cagagtgctgggattacaggcatgagccaccgcacctggccCAGAGCTC-CACTTTTTTATTTGCAATCACATCATCCttctattgatgac----------ttacctgcagctcacactacacaccactcaccacgtgatcggacaaca-ctgaagcagtctatacctgttcaatgagtaccagcaaggccaagttgctctaaaggttgccaaacact-----caatctctgtgcttgcttac i nomLeu3.chr18 C 0 I 254 s rheMac3.chr9 73920501 222 - 130959383 tagagttctgggtttacaggcatgagccaccacacttgaccCAGAGCTC-CACTGTTTTATTTGCAATCACATCATCCttctattgatgac----------ttacctgcagctcacactacacaccactcaccaagtgatctgacaaca-ctgaagcagtctatacctgttcaatgagtaccaacaaggtcaagctgctctaaaggttgctaaacact-----caatctctgtgcttac---- i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75481065 222 - 133195287 tagagtgctgggattacaggcatgagccaccacacttgaccCAGAGCTC-CACTGTTTTATTTGCAATCACATCATCCttctattgatgac----------ttacctgcagctcacactacacaccactcaccaagtgatctgacaaca-ctgaagcagtctatacctgttcaatgagtaccaacaaggtcaagctgctctaaaggttgctaaacact-----caatctctgtgcttac---- i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73345270 222 - 125196307 tagagtgctgggattacaggcatgagccaccgcacttgacCCAGAGCTC-CACTTTTTTATTTGCAATCACATCATCCTTCTATTGATGAC----------TTACCTGCAGCTCACACTACACACCACTCACCAAGTGATCTGACAACA-CTGAAGCAGTCTATACCTGTTCAATGAGTACCAACAAGGTCAAGCTGCTCTAAAGGTTGCTAAACACT-----CAATCTCTGTGCTTAC---- i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72177935 222 - 125710982 tagagtgctgggattacaggcatgagccaccgcacctgaccCAGAGCTC-CACTTTTTTATTTGCAATCACATCgtccttctattgatgac----------ttacctgcagctcacactacacaccactcaccaagtgatctgacaaca-ctgaagcagtctatacctgttcaatgagtaccaacaaggtcaagctgctctaaaggttgctaaacact-----caatctctgtgcttac---- i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75637081 236 - 121768101 cagagtaatgggattacaggcataagccaccgtgcccagccCAGAGCTC-TACTTTTTTATTTGCAATCACATCATCCTACTACTGGTGACCTGatgactattacctgcagctcacaccacacaccactcaccatgtgatctgacaaca-ctgaagcagtctatacctgttcagtgagtaccagcaaggtcaagttgctctacaggttgctaaacact-----caatctctgtgcttacttac i calJac3.chr12 C 0 C 0 s canFam3.chr4 27790554 195 + 88276631 CAGAGTGC------------------------------------AGCTCTCATTTTTTTATCTGCAGTCACACGGTCCTCCtcctgctgct--------ggttactcacggctccgggcacatgtgactccccatgtgattggacagcacctgaagcagcctatacctgctcaatgagTTCCGGCAAGGTCAAACTGCTCTGAAGGTTGCCAAACCCTAACTGTAACCTCCATGCTAAC---- i canFam3.chr4 C 0 C 0 e mm10.chr14 24229692 1030 + 124902244 I a score=984381.000000 s hg38.chr10_KI270825v1_alt 145802 325 + 188315 ttcatcacagaccaggaaccagaagattgcaaaccagcactggtctgtagaccacaccctgagtTGGGGGTAGAGTAGGGAGAAACAAACC-AACCAACCCGCCCTGGATGTCATGGCTGGGCTCCTGC----CCCCCTATGCCACTTAAACAGCCATGGAACTGGGACAATCATAAGAATGAAAATAACTGggccggcgcggtgactcatgcctgttatctcagcactttgggaggccaaggcaggcagatcactttagcccagaagttcaagaccagcctgagcaacatggtgaaaccctgtctctataaaaaatacaaaaagtagcc s panTro4.chr10 76523697 325 + 133524379 ttcatcacagaccaggaaccaggagattgcaaaccagcactggtctgtagaccacaccctgagtTGGGGGTAGAGTAGGGAGAAACAAACC-AACCAACCCGCCCTGGATGTCATGGCTGGGCTCCTGC----CCCCCTATGCCACTTAAACAGCCATGGAACTGGGACAATCATAAGAATGAAAATAACCGggccggcgcggtgactcatgcctgttatctcagcactttgggaggccaaggcaggcagatcactttagcccagaagttcaagaccagcctgagcaacatggtgaaaccctgtctctataaaaaatacaaaaagtagcc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76192418 325 - 133410057 ttcatcatagaccaggaaccaggagattgcaaaccagcactggtctgtagaacacaccctgagtTGGGGGTAGAGTAGGGAGAAACAAACC-AACCGAACCACCCTGGATGTCATGGCTGGGCTCCTGC----CCCCCTATGGCACTTAAACAGCCATGGAACTGGGACAATCATAAGAATAAAAATAACCAggccggcacagtgactcatgcctgtaatctcagcactttgggaggccaaggcaggcagattacttaagcccagaagttcaagaccagcctgggcaacatggtgaaatcctgtctctataaaaaatacaaaaagtagcc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35129514 325 + 104879549 ttcatcacagaccaggaaccaggagattgcaaaccagcaccggtctgtagaccacaccctgagGTGGGGGTAGAGTAGGGAGAAACAAACC-AACCAACCCACCCTGGATGTCATGGCTGGGCTCCTGC----CCCCATATGCCATTTAAATAGCCACGGGACTGGGACAATCATAGGAATAAAAATAACCAggccggtgtggtgactcatgcctgtaatctcagcactttgggaggccaaggcaggcagatcacttgagcccagaagttcaagaccagcccgagcaacatggcgaaaccccgtctctataaaaaatagaaaaagtagcc i nomLeu3.chr18 I 254 C 0 s rheMac3.chr9 73920723 320 - 130959383 ttcatcacagaccaggaaccaggagattgcaaaccagcactggtctgcagaccacaccctgagtTGGGGGTAGAGTAGGG----ACAAACC-AACCAACCCGCCCTGGATGTTATGGCTGGGCTCCTGC----CTCCC-ATGCCACTTAAACAGCCATGGGACTGGGACAATCATAAGAATAAAAATAACCGggccagtgtggtgactcatgcctgtaatctcagcactttgggaggccaaggcaggcagatcacttgagcccagaagttcaagaccagcttgggaaacagggtgaaacctcgtctctataaaaaatataaaaagtagcc i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75481287 320 - 133195287 ttcatcacagaccaggaaccaggagattgcaaaccagcactggtctgcagaccacaccctgagtTGGGGGTAGAGTAGGG----ACAAACC-AACCAACCCGCCCTGGATGTTATGGCTGGGCTCCTGC----CTCCC-ATGCCACTTAAACAGCCATGGGACTGGGACAATCATAAGAATAAAAATAACCGGGCCAgtgtggtgactcatgcctgtaatctcagcactttgggaggccaaggcaggcagatcacttgagcccagaagttcaagaccagcttgggaaacagggtgaaacctcgtctctataaaaaatataaaaagtagcc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73345492 322 - 125196307 TTCATCACAGACCAGGAACCAGGAGATTGCAAACCAGCACTGGTCTGCAGACCACACCCTGAGTTGGGGGTAGAGTAGTGagaaacaaacc-aaccaacccgCCTTGGATGTTATGGCTGGGCTCCTGC----CTCCC-ATGCCACTTAAACAGCCATGGGACTGGGACAatcataagaataaaaataaccgggccagtgtggtgactcatgcctgtaatctcagcactttgggaggccaaggcaggcagatcacttgagcccagaagttcaagaccagcctgggaaac--ggtgaaacctcgtctctataaaaaatataaaaagtagcc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72178157 323 - 125710982 ttcatcacagaccaggaaccaggagattgcaaaccagcactggtctgcagaccacaccctgagtTGGGGGTAGAGTAGGGAGAAACAAACC-AGCCAACCCGCCCTGGATGTCATGGCTGGGCTCCTGC----CTCCC-ATGCCACTTAAACAGCCATGGGACTGGGACAATCATAAGAATAAAAA-AACCGGGCCAgtgtggtgactcatgcctgtaatctcagcactttgggaggccaaggcaggcaggtcacttgagcccagaagttcaagaccagcctgggaaacatggtgaaacctcgtctctataaaaaatataaaaagtagcc i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75637317 329 - 121768101 ttcatcatggaccaggaaccaggagaccacaaaccagcactggtctgcagaccacaccccgagAATAGGATCGTGTAGAGGGAAGCAAACC-AACCAACCCCCACTGGATGTCACAGCTGGGCTCCTGCCCCGCCCCCCATGCCACTGAAACAGCCATGGGACTGGGACAATCACAACAATAAAAATAACAGggccggagcagtggctcatgcctgtgatcccagcactttgggaggccaaagcaggcagatcacttgagcccagaagttcaagactaacctgggcaacatcgtgaaaccccgtctctacaaaaaatacaaaaactagcc i calJac3.chr12 C 0 C 0 s canFam3.chr4 27790749 181 + 88276631 ---ATCACAGATCAGGAGCCTGGAGCTCACAGACCAGCACCAGTCTGTAGACCACACCGTGAGTGTGGAATAGAGTGGGG--GAACAAGCCAAACCCACCCAGCCTGGATCTCACAG----------------TTTCAGGTGGCACTTACACAGCCGGGAGA---------------------------------CGGCGGGG----------------------------GGGGGGCC-------------------------------------------------------------------CTAATAACAACataaagaacagtc i canFam3.chr4 C 0 C 0 e mm10.chr14 24229692 1030 + 124902244 I a score=383310.000000 s hg38.chr10_KI270825v1_alt 146127 122 + 188315 aggcacagtggcatgcacctatagttgcagctactcaggaggc----taaggtaggataatcaattgagcctgtgaggtggaggtggccatgagctgagatcatgccactgcactccagcctgggc s panTro4.chr10 76524022 122 + 133524379 aggcacagtggcatgcacctatagttgcagctactcaggaggc----taaggtaggataatcaattgagcctgtgaggtggaggtggccattagctgagatcatgccactgcactccagcctgggc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76192743 122 - 133410057 aggcacagtggcatgcacctacagttgcagctactcaggaggc----taaggtaggataatcaattgagcctgtgaggtggaggtggccatgagctgagatcatgccactgcactccagcctgggc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35129839 122 + 104879549 aggcacagtggtacacacctatagttgcagctactcaggaggc----taaggtaggataatcaattgagcctgtgaggtggaggtggcaatgagctgagaccgtgtcactgcactccagcctggga i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73921043 122 - 130959383 aggcatagtggcatgcacctatagttgcagctgctcaggaggc----taaggtaggataatcaattgagcctgtgaggtggaggtggcaataagctgagatcatgccactgcactccagcctgggc i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75481607 122 - 133195287 aggcatagtggcatgcacctatagttgcagctgctcaggaggc----taaggtaggataatcaattgagcctgtgaggtggaggtggcaataagctgagatcatgccactgcactccagcctgggc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73345814 122 - 125196307 aggcatagtggcatgcacctatagttgcagctgctcaggaggc----taaggtaggataATCAATTgagcctgtgaggtggaggtggcaatgagctgagatcatgccactgcactccagcctgggc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72178480 126 - 125710982 aggcatagtggcatgcacctatagttgcagctgctcaggaggctaagtaaggtaggataatcaattgagcctgtgaggtggaggtggcaatgagctgagatcatgccactgcactccagcctgggc i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75637646 122 - 121768101 aggcacagtggcctgtgcctatagttggagctactcaggaggc----taaggtgggacaatcacttgagcctgtgaggtggaggctgcaatgagctgagatcatgccactgcactccagcttgggc i calJac3.chr12 C 0 C 0 e canFam3.chr4 27790930 0 + 88276631 C e mm10.chr14 24229692 1030 + 124902244 I a score=75503.000000 s hg38.chr10_KI270825v1_alt 146249 31 + 188315 aacagagttataccctgtctcaaaTACACAC s panTro4.chr10 76524144 31 + 133524379 aacagagttataccttgtctcaaaTACACAC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76192865 31 - 133410057 aacagagtgataccctgtctcaaaTACAGAC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35129961 31 + 104879549 aacagagtgataccctgtctcaaaTACATAC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73921165 31 - 130959383 aacagagtgataccctgtctcaaaTACACAC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75481729 31 - 133195287 aacagagtgataccctgtctcaaaTACACAC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73345936 31 - 125196307 aatagagtgataccctgtctcaaatacacac i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72178606 31 - 125710982 aacagagtgataccctgtctcaaaTACACAC i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27790930 0 + 88276631 C e mm10.chr14 24229692 1030 + 124902244 I e calJac3.chr12 75637768 0 - 121768101 C a score=39442.000000 s hg38.chr10_KI270825v1_alt 146280 15 + 188315 ATAAATatagcagct s panTro4.chr10 76524175 15 + 133524379 ATAAATatagcagct i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76192896 15 - 133410057 ataaatatagcagct i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35129992 15 + 104879549 ATAAATatagcagct i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73921196 15 - 130959383 ACAaatataggagct i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75481760 15 - 133195287 ACAAATATAGGAGCT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73345967 15 - 125196307 acaaatataggAGCT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72178637 15 - 125710982 ACAaatacaggagct i chlSab2.chr9 C 0 C 0 s mm10.chr14 24230722 15 + 124902244 ACAAAGATAAAAGCT i mm10.chr14 I 1030 C 0 e canFam3.chr4 27790930 0 + 88276631 C e calJac3.chr12 75637768 0 - 121768101 C a score=323094.000000 s hg38.chr10_KI270825v1_alt 146295 110 + 188315 tacgcttacacagtacttaccatgtgccacacactgctgtcaacactt-------actaacttatttaaccctcacaatacaaggtcctgttattatccccattccacagatgagga s panTro4.chr10 76524190 110 + 133524379 tatgcttacacagtacttaccatgtgccacacactgctgtcaacactt-------actaacttatttaaccctcacaatacaaggtcctgttattatccccattccacagatgagga i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76192911 109 - 133410057 tatgcttacacagtacttaccatgtgccacaca-tgctgtcaacactt-------actaacttatttaatcctcacaatacaaggtcctattattatccccattccacagatgagga i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35130007 110 + 104879549 tatgcttacacagtacttaccatgtgccacgcactgctctcaacactt-------aataacttatttaatcctcacaatacaaggtcctattattatccccattccacagatgagga i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73921211 110 - 130959383 tatgcttacacagtacttaccatgtgccacgcactgctctcaacactt-------agtaacttctttaatcctcacaatacaaggtcctattattatccccattccatagatgagga i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75481775 110 - 133195287 TATGCTTACACagtacttaccatgtgccacgcactgctctcaacactt-------agtaacttctttaatcctcacaatacaaggtcctattattatccccattccatagatgagga i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73345982 110 - 125196307 TATGCTTACACAGTACTTACCATGTGCCACACACTGCTCTCAACACTT-------AGTAActtctttaatcctcacaatacaaggtcctattattatccccattccatagatgagga i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72178652 110 - 125710982 tatgcttacacagtacttaccatgtgccacgcactgctctcaacactc-------agtaacttctttaatcctcacagtacaaggtcctattattatccccattccatagatgagga i chlSab2.chr9 C 0 C 0 s mm10.chr14 24230737 115 + 124902244 GG-ACTTCCCTACTATTTA-CGTTTGCCAGGCACCGCTTGCAAAACCTCATAGACAGGAACTCTCCCAATTCTCACAATATCAAATTCCATAACTCTTTCCACTTCGCCAATACAGA i mm10.chr14 C 0 C 0 s canFam3.chr4 27790930 105 + 88276631 tatgcttacaca-----------gtgccaggcactgctctaaacaatt-tcaaacagtaattcctttaatccctgcagtacaaagtcctactactaccctcgtttcacagatgggga i canFam3.chr4 C 0 C 0 e calJac3.chr12 75637768 0 - 121768101 C a score=1291161.000000 s hg38.chr10_KI270825v1_alt 146405 384 + 188315 aaccaaggcacagagagagaaagcaatttggccatggtcacggtaagtggcagattcaggattcaaacccagtatcttggctcaggtacaggctcttaattactctc------cta---aactgACTCCT-Gagtaacccggcc-ttccttacctgtttcctcacttgtaaggtcaggtaaggacccctaaaaggttgctggtgagatcaaatgag--aaaataaatacaaaAATAAT----AAAGTA------------TCCTATGCAACAC-AACACCTACCACCTACACAGCATACAACCACCCA----TGTGTGGCCATGAACC-TGCAGCAGCCACCTACCTTTCACACAAGCCACAAGAGGGCGAGGGAGTCACGGATCCCACTGCAGAGGTGAGGACA-TGAGGCCTGGAA--AG s panTro4.chr10 76524300 384 + 133524379 aaccaaggcacagagagagaaaacaatttggccatggtcacggtaagtggcagattcaggattcaaatccagtatcttggctcaggtacaggctcttaattactctc------cta---aactgACTCCT-Gagtaacccggcc-ttccttacctgtttcctcacttgtaaggtcaggtaaggacccctaaaaggttgctggtgagatcaaatgag--aaaataaatacaaaAATAAT----AAAGCA------------TCTTATGCAACAC-AACACCTACCACCTACACAGCATACAACCACCCA----TGTGTGGCCATGAACC-TGCAGCAGCCACCTACCTTTCACACAAGCCACGAGAGGGCGGGGGAGTCACGGATCCCATTGCAGAGGTGAGGACA-TGAGGCCTGGAA--AG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76193020 388 - 133410057 aactaaggcacagagagagaaagcaatttggccagggtcacagtaagtggcagattcaggattcaaacccagtatcttggctcaggtacaggctcttaattactctc------cta---aactgactcct-gagtaacccggcc-ttccccacctgcttcctcacttgtaaggtcaggtaaggacccctaaatggttgctggtgagatcaaatgag--aaaataaatacaaaAATAATAAACAAAGTA------------TCCTATGCAACAC-AACATCTACCACCTACACAACATACGACCACCCA----TGTGTGGCCATGAACC-TGCAGCAGCCACCTACCTTTCACACAAGCCACGTGAGGTGGGGGGAGTCACAGATCCCACTGGAGAGGTGAGGACA-TGAGGCCTGGAA--AG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35130117 388 + 104879549 aactaaggcacagagagagaaagcaatttggccagggtcacagtaagtggcaaattcaggattcaaacccagtatcttggctcaggtacaggctcttaattactctc------cta---aactgACTCCc-gagtaacctggcc-ttccccacctgcttcctcacttgtaaggtcaagtaaggaaccctaaagggttgctggtgagatcaaatgag--aaaataaatacaaaAATAATAAACAAAGTA------------TCCTATGCAACAC-AACGCCTACCACCTACACAGCATACAACCACCCA----TGTGTGGCCATGAACC-TGCAGCAGCCACCTACCTTTCACACGAGCCACGTGAGGGCGGGGGAGTCACAGATCCCACTGGAGAGGTGAGGACA-TGAGGCCTGGAA--AG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73921321 384 - 130959383 aactaaggcacagagagagaaagcaatttggccagggtcatagtaagtggcagattcaggattcaaacccagtatcttggctcaggtacagattcttaattactctc------cta---aactgACTCCC-GAGTAACCCAGGC-TTCCCCACCTgcttcctcacttgtaaggtcatgtaaggatccctaaagggttgctggtgagatcaaatgag--aaaataaatacaaaAATAAT----AAAGTA------------TCCTATGCAACAC-AACGCCTACCACCTACACAGCATACAACCACCCA----TGTGTGGCCATGAACC-TGCAGCAGCCACCTACCTTTCACACCAGCCACGTGAGGGCGGGGCAGTCACAGATCTCATCGGAGAGGTGAGGACA-TGAGGCCTGGAA--AG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75481885 384 - 133195287 aactaaggcacagagagagaaagcaatttggccagggtcatagtaagtggcagattcaggattcaaacccagtatcttggctcaggtacagattcttaattactctc------cta---aactgACTCCC-GAGTAACCCAGGC-TTCCCCACCTgcttcctcacttgtaaggtcaagtaaggatccctaaagggttgctggtgagatcaaatgag--aaaataaatacaaaAATAAT----AAAGTA------------TCCTATGCAACAC-AACGCCTACCACCTACACAGCATACAACCACCCA----TGTGTGGCCATGAACC-TGCAGCAGCCACCTACCTTTCACACCAGCCACGTGAGGGCGGGGCAGTCACGGATCTCATCGGAGAGGTGAGGACA-TGAGGCCTGGAA--AG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73346092 384 - 125196307 aactaaggcacagagagagaaagcaatttGGCCAGGGTCATAGTAAGTGGCAGATTCAGGATTCAAACCCCGTATCTTGGCTCAGGTACAGATTCTTAATTACTCTC------CTA---AACTGACTCCC-GAGTAACCCAGGC-TTCCCCACCTGCTTCCTCACTTGTAAGGTCAAGTAAGGACCCCTAAAGGGTTGCTGGTgagatcaaatgag--aaaataaatacaaaaataat----aaagga------------tcCTATGCAACAC-AACGCCTACCACCTACACAGCATACAACCACCCA----TGTGTGGCCATGAACC-TGCCGCAGCCACCTACCTTTCACACCAGCCACGTGAGGGCGGGGCAGTCACGGATCCCATCGGAGAGGTGAGGACG-TGAGGCCTGGAA--AG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72178762 384 - 125710982 aactaaggcacagagagagaaagcaatttggccagggtcatagaaagtggcagattcaggattcaaacccagtatcttggctcaggtacagattcttaattactctc------cta---aactgACTCCC-GAGTAACCCAGGC-TTCCCCACCTgcttcctcacttgtaaggtcaagtaaggacccctaaagggttgctggtgagatcaaatgag--aaaataaatacaaaAATAAT----AAAGTA------------TCCTATGCAACAC-AACGCCTACCACCTACACAGCATACAACCACCCA----TGTGTGGCCATGAACC-TGCAGCAGCCACCTACCTTTCACACCAGCCACGTGAGGGCGGGGCAGTCACGGATCCCATCGGAGAGGTGAGGACA-TGAGGCCTGGAA--AG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75637768 377 - 121768101 aactaaggcacagagagagaaagcaacttgaccagggtcacagtaagtagcagatcaaggattcaaacccagtatcttggctcaggtacaagctcttaatgactCCTGACTGACTGAGTAACTGACTCCT-GAGTAACCTGGCC-TTCCCCACCTGCTTCCTCACTTGTAAGGCCAGGTACGGACCCCTAGAGGGTTGCAGGTGAGATCAAATGAG--A----AAATACAAAAATAACAGACAAAGCA------------TCCTGTGCAACAC-AATGCCTACCAGCAACATAGCATACAACCACCCA----TGTGCG--------------TGTGGCCACAAACCTTTCACACCAGCCAC---AGGGGGCAGGGGTCACAGATCCCATTGGAGAGGTGAGAACA-TGAGGTCTGGAA--AG i calJac3.chr12 C 0 C 0 s mm10.chr14 24230852 337 + 124902244 --------AACAGAGAGAGAAAACAGTTTACACTT-----------GTACCAGACCCTCAGCTCAAATCCA------------------------------------------TCA---AACTGCCTCCA-GAGCACCCCGGGCATCCCTCATCTGTGACTCCACTTCTAAGTCTGGGTAAAGAATCCTGCTGGGTTGCTGGAGGGTCTGAAGGAGGAAAAAGGAATGCAAAAGTAAC----TGAGCAGGCACCCCGCCTCCCCATGAAGCACTAATGCATAC---CTGCTCAGCACCCAGCCACCGAGAGGCATGGGGTCACTTCCTATGAGGAACCCTTCTACCTTTC---CTAGC----TGAAGGTAGG------CTAGATTCCATTTCCAGCATCAGCACACCAAGACCTAGAAAGAG i mm10.chr14 C 0 C 0 s canFam3.chr4 27791035 366 + 88276631 agctgagacacagagaaggaaggtgactttgcccagg------------------------TTTGAGCCCAATA-CTTGGCTCAGATACAGACTCTTAACCATTCCA------CTG---AACTGACTCCCAAAGTGACAGGGCC-TCCTCAAGCTGTTCCCTCACTTGTCAGGTGGAGTAAGGACCCCCAAAGGGTTGCTAATGAGAGGAAACGAG--ACAATGAACACAAAAATAATAGACCAAGCA------------TCCTGCGCAATAGAAACATGTACCATCTACACAGCACACAATCATCTGCATGCATGGGATCGTTTCCC-TGCACCGTCCACCT-CCTTTCACACGGGCTCTGGGAAGGAGGTGGTGTCACAGACCCCATCAAACAAACCAGGA---TAAGGTCCGGAG--AG i canFam3.chr4 C 0 I 8 a score=23603.000000 s hg38.chr10_KI270825v1_alt 146789 8 + 188315 CAGAGGTA s panTro4.chr10 76524684 8 + 133524379 CAGAGGTA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76193408 8 - 133410057 CAGAGGTA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35130505 8 + 104879549 CAGTGGTA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73921705 8 - 130959383 CAGCGGTA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75482269 8 - 133195287 CAGCGGTA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73346476 8 - 125196307 CAGCGGTA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72179146 8 - 125710982 CAGCGGTA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75638145 8 - 121768101 CAGCAGCC i calJac3.chr12 C 0 C 0 s mm10.chr14 24231189 8 + 124902244 TAGAGGTA i mm10.chr14 C 0 I 27 e canFam3.chr4 27791401 8 + 88276631 I a score=62901.000000 s hg38.chr10_KI270825v1_alt 146797 20 + 188315 CCCTCAGCCCCCTCTCTCCT s panTro4.chr10 76524692 20 + 133524379 CCCTCAGCCCCCTCTCTCCT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76193416 20 - 133410057 CCCTCAGCCCCCTCTCACCT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35130513 20 + 104879549 CCCTCAGCCCCCTCTCTGCT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73921713 20 - 130959383 CCCTCAGCCCCCTCTCTCCT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75482277 20 - 133195287 CCCTCAGCCCCCTCTCTCCT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73346484 20 - 125196307 CCCTCAGGCCCCTCTCTCCT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72179154 20 - 125710982 CCCTCAGCCTCCTCTCTCCT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75638153 20 - 121768101 CCCTCAGCCTCCTCTCTCCT i calJac3.chr12 C 0 C 0 e canFam3.chr4 27791401 8 + 88276631 I e mm10.chr14 24231197 27 + 124902244 I a score=73480.000000 s hg38.chr10_KI270825v1_alt 146817 22 + 188315 TAGCCATGCTCTTCTCCTC--CCC s panTro4.chr10 76524712 22 + 133524379 TAGCCATGCTCTTCTCCTC--CCC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76193436 22 - 133410057 CAGTCATGCTCTTCTCCTC--CCC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35130533 22 + 104879549 TAGCCATGCTCTTCTCCTC--CCC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73921733 22 - 130959383 TAGCCATACTCTTCTCCTC--CCC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75482297 22 - 133195287 TAGCCATACTCTTCTCCTC--CCC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73346504 22 - 125196307 TAGCCATACTCTTCTCCTC--CCC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72179174 22 - 125710982 TAGCCATGCTCTTCTCCTC--CCC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75638173 22 - 121768101 CAGTCATGCTCTCCTCCTC--CCC i calJac3.chr12 C 0 C 0 s mm10.chr14 24231224 24 + 124902244 TGGTCACTCACTTCCCTTTGGCCC i mm10.chr14 I 27 C 0 e canFam3.chr4 27791401 8 + 88276631 I a score=3512053.000000 s hg38.chr10_KI270825v1_alt 146839 1092 + 188315 AAAGAGACAGCCACAACACAGGAACATGTCCCACACTCCCCAGAGGACACACCAACTCT-ATTTCCAAACATCCCCACTGTAACTCTCAGAGTTGAAACTGGGGAGAACGCTGGCTTTCCAATCCTCCTAGCAACTCACAGACAGCCAGTCAGACACCTCAGGGGATCCTGGGAAGGCCAGCCAGTCTACAT-CCTCACCTACCCACCTGCGGCCACCGGGTCCTCCTTCACACATCACAGACCACCCATCAGCCTCCCACCCAATGCCAACC-CAACCCATTCCCCTCTCCAGCCCC-------AGCAGCCTCACAAGAGAACCAGCC-CAGAGAGAATGACTGGAAGG--A-----CAG-----------------CAGAGGCTGGTTGGCCTGGCCTCATTTTTCCAGCACCTGCTGAGCGAATGCTCCAATCAGAAGCCCTGAATTACCAGACAAACCCGCCAGTCACAGAATGGA-TTC------TCT--------------------CCCAAGTCCTGCTCTGTGCTCTCCCCTCGCCAGGTCTACCTCCCTCCTTC---------------------------CAGCC-----GCCTGCCTATGC-------CCAGCTCACCATACACCCT-CCTTCCTTAGGCACTGAAACTTCAAGCAGCCTCACCTGTCTGGCACTATCTGTACTACTAGATACCCACTT----------GTTCA-----AGTTTTCCAACAAGACAATAAACTCCTGGGGGGTGGGGGGAGAGAAGCCATCTTCTTTGTTGCCCTTCTGAGAATCTGATGGATTTTTAGACACAAAAACACTTGCCATGTGCTATAAAGCACAAAATGGAAGGTGAGAAGGAGGAAGTCAGTATAAGCTAGGCTGATTATTTTCTGGTATTTCTAAAAGCTCCACAATAGAGCAATTAAAAAGGAAAACCTTT---GAAACACAACAGCAGGATATATATGTTCCAGCTAAAAGAACG----AATCC------AGGT-TGGAATATTGTTCATGGTAG------ATATCT-TT-CCATCTTTGCATGCTCAGCACTTAGCCGAGCCTGGTAAAGAGTAGTGACCAGGTACTTGC-------------------------------TGGAGAGATAGACAGAT-AAACTCT-TGTC-AGAATCTGGGC-TCCACCCTAAAGCTTGTGTTATCTCATGCAAGGAGAAGACAC-TGTGACCAGCTCCAC-TGAGTTCTCATGAGAAG-CCT s panTro4.chr10 76524734 1092 + 133524379 AAAGAGACAGCCACAACACAGGAGCATGTCCCACACTCCCCAGAGGACACACCAACTCT-ATTTCCAAACATCCCCACTGTAACTCTCAGAGTTGAAACTGGGGAGAACGCTGGCTTTCCAATCCTCCTAGCAACTCACAGACAGCCAGTCAGACACCTCAGGGGATCCTGGGAAGGCCAGCCAGTCTACAT-CCTCACCTACCCACCTGCGGCCACCGGGTCCTCCTTCACACATCACAGACTACCCATCAGCCTCCCACCCAATGCCAACC-CAACCCATTCCCCTCTCCAGCCCC-------AGCAGCCTCACAAGAGAACCAGCC-CAGAGAGAATGACTGGAAGG--A-----CAA-----------------CAGAGGCTGGTTGGCCTGGCCTCATTTTTCCAGCACCTGCCGAGCGAATGCTCCAATCAGAAGCCCCGAATTACCAGACAAACCCGCCAGTCACAGAATGGA-TTC------TCT--------------------CCCAAGTCCTGCTCTGTGCTCTCCCCTCGCCAGGTCTACCTCCCTCCTTC---------------------------CAGCC-----GCCTGCCTATGC-------CCAGCTCACCATACACCCT-CCTTCCTTAGGCACTGAAACTTCAAGCAGCCTCACCTGTCTGGCACTATCTGTACTACTAGATACCCACTC----------GTTCA-----AGTTTTCCAACAAGACAATAAACTCCTGGGGGGTGGGGGGACAGAAGCCATCTTCTTTGTTGCCCTTCTGAGAATCTGATGGATTTTTAGACACAAAAACACTTGCCATGTGCTATAAAGCACAAAATGGAAGGTGAGAAGGAGGAAGTCAGTATAAGCTAGGCTGATTATTTTCTGGTATTTCTAAAAGCTCCACAATAGAGCAATTAAAAAGGAAAACCTTT---GAAACACAACAGCAGGATATATATGTTCCAGCTAAAAGAACA----AATCC------AGGT-TGGAATATTGTTCATGGTAG------ATATCT-TT-CCATCTTTGCATGCTCAGCACTTAGCCGAGCCTGGGAAAGAGTAGTGACCAGGTACTTGC-------------------------------TGGAGAGATGGACAGAT-AAACTCT-TGTC-AGAATCTGGGC-TCCACCCTAAAGCTTGTGTTATCTCATGCAAGGAGAAGACAC-TGTGACCAGCTCCAC-TGAGTTCTCATGAGAAG-CCT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76193458 1100 - 133410057 AAAGAGACAGCCACAACACAGGAGCATGTCCCACACTCCCCAGAGGACACACCAACTCT-ATTTCCAAACATCCCCACTGTAACTCTCAGAGTTGAAACTGGGGAGAACGCTGGCTTTCCAATCCTCCTAGCAACTCACAGAAAGCCAGTCAGACACCTCAGGGGATCCTGGGAAGGCCAGCCAGTCTACAT-CCTCACCTACCCACCTGCGGCCACCAGGTCCTCCTTCACACATCACAGACCATCCATCAGCCTCCCACCCCATGCCAACC-CAACCCATTCCTCTCTCCAGCCCC-------AGCAGCCTCACAAGAGAACCAGCC-CAGAGAGAATGACTGGAAGG--A-----CAG-----------------CAGAGGCTGGTTGGCCTGGCCTCATTTTTCCAGCACCTGCTGAGCGAATGCTCCAATCAGAAGCCCCGAATTACCAGACAGACCCGCCAGTCACAGAATGGA-TTC------TCT--------------------CCCAAGTCCTGCTCTGTGCTCTCCCCTCGCCAGGCCTGCCTCCCTCCTTC---------------------------CAGCCGCCTGGCCTGCCTATGC-------CCAGCTCACCATACACCCT-CCTTCCTTAGGCACCGAAACTTCAAGCAGCCTCACCTGTCCGGCACTATCTGTACTACTAGATACCCACTC----------ATTCA-----AGTTTTCCAACGAGACGATAAACTCCTGGGGGGTGGGGGGGCAGAAGCCATCTTCTTTGTTGCCCTTCTGAGAATCTGATGGATTTTTAGACACAAAAACATTTGCCATGTGCTATAAAGCACAAAATGGAAGGTGAGAAGGAGGAAGTCAGTATAAGCTAGGCTGATTATTTTCTGGTATTTCTAAAAGCTCCACAATAGAGCAATTAAAAAGGAAAACCTTT---GAAACACAACAGCAGGATATATATGTTCCAGCTAAAAGAACA----AATCC------AGGT-AGGAATATTGTTCATGGTAG------ATATCT-TT-CCATCTTTGCATG-TCAGCACTTAGCCGAGCCTGGTAAAGAGTAGTGACCAGGTACTTGC-------------------------------TGGAGAGATGGACAGATAAAACTCT-TGTC-GGAATCTGGGCTTCCACCCTAAAGCTTGTGTTATCTCATGCAAGGAGAAGACAC-TGTGACCAGTTCCACTTGAGTTCTCATGAGAAGCCCC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35130555 1090 + 104879549 AAAGAGACAGCCACAACACAGTAGCATGTCCCACACTCCCCAGAGGACACACCAACTCT-ATTTCCAAACATCCCCACTATAACTCTCAGACTTGAAACTGGGGAGAACGCTGGCTTTCCAATCCTCCTAGTAACTCACAGAAAGCCAGTCAGACACCTCAGGGGATCCTGGGAAGGCCAGCCAGTCTACAT-CCTCACCTACCCACCTGCGGCCACCGGGTCCTCCTTCACAcatcacagaccacccaccagcctcccaccccatgccaacc-caacccattccTCTCTCCAGCCCC-------AGAAGCCTCACAAGAGAACCAGCC-AAGAGAAAATGACTGGAAGG--A-----CAG-----------------CAGAGGCTGGCTGGCCTGGCCTCATTTTTCCAGCACCTGCTGAGTGAATGCTCCAATCAGAAGCCCCGAATTACCAGACAGACCCGCCAGTCACAGAATGGA-TTC------TCT--------------------CCCAAGTCCTGCTGTGTGCTGTCCCCTCGCCAGgcctgcctccctccttc---------------------------cagcc-----gcctgcctATGC-------CCAGCTCACCATACACCCT-CCTTCCTTAGGCACCGAAACTTCAAGCAGCCTCACCTGTCCGGCGTGATCTGTACTACTAGATACCCACTC----------GTTCA-----AGTTTTCTAACGAGACAATAAACTCCTGGGGGGTCAGGGGGCAGAAGCCATATTCTTTGTTGCCCTTCTGAGAATCTGACAGATTTTTAGACACAAGAACACTTGCCATGTGCTATAAAGCACAAAATGGAAGGTGAGAAGGAGGCAGTCAG--TAAGCCAGGCTGATTATTTTCTGGCATTTCCAAAAGCTCTACAATAGAGCAATTAAAAAGGAAAACCTTT---GAAACACAACAGCAGGATATATATGTTCCAGCTAAAAGAACA----AATCC------AGGT-TGGAATATTGTTCATGGTAG------GTATCT-TT-TCATCTTTGCATGCTCGGCACTTAGCCGAGCCTGGTAAAGAGCAGTAACCAGGTACTTGC-------------------------------TGGAGAGATGGACAGAT-AAACTCT-TGTC-GGAATCTGGGC-TCCACCCTAAAGCTTGTGTTATCTCATGCAAGGAGAAGACAC-TGTGGCCAGCTCCAC-TGAGTTCTCATGAGAAG-CCT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73921755 1041 - 130959383 AAAGAGACAGCCACAACACAGGAGCATGTCCCACACTCCCCAGAGGACACATGAACTCG-ATTTCCAAACATCCCCACTGTAACGCTCAGACTTGAAACTGGGAAGAACGTTGGCTTTCCAATCCTCCTAGCAACTCATAGAAAGCCAGTCAGACACCTCAGGGGATCCTGGGAAGGCCAGCCGGTCTACAT-CCTCACCTACCCACCTGCGGCCAGCGGGTCCTCCTTCACACATCACAGACCACCCATCAGCCTCTCACCCCATGCCAACC-CAACCCATTCCTGTCTCCAGCCCC-------AGAAGCCTCACAAGACAACCAGCC-CAGAGAGAATGACTGGAAGG--A-----CAG-----------------CAGAAGCTGGTTGGCCTGGCTTCACTGTTCCAGCACCTGCTGAGCGAAGGCTCCAATCAGAATGCCTGAATTACC-GACAGACCCGCCAGTTATAGAATGGA-TTC------TCT--------------------CCCAAGT---------------------------CCTGCCTCCCTCCTTC---------------------------CAGCC-----GCCTGCCTATGC-------CCAGCTCACCGTACACCCT-CCTTCCTTAGGCACCGAAACTTCAAGCAGCCTCATCTGTCCGGCACAATCTGTACCGCTAGACA--------------------CA-----AGTTTTCCAAAGAGACAATAAACTCCTGGGGGTAAGGGGGGCAGAAGGCATCTTCTTTGTTGCCCTTCTGAGAATCTG-CTGATTTTTAGACACAAAAACACTAGCCATGTGCTATAAAGCACAAAATGGAAGGTGAGAAGGAGGAAGTCAG--TAAGCTAGACTGA-TATTTTCT---------AAAAGCTCCACGATAGAGCAATTGAAAAGGAAAACTTCT---GAAACACAACAGCAGGATATACATGTTCCAGCTAAAAGAACA----AATCC------AGGT-TGGGATATTGTTCATGGTAG------ATATCT-TT-TCATCTTTGCATGCTCGGCACTTAGCCAAGCCTGGTAAAGAGCAGTGACCGGGTACTTGC-------------------------------TGGAGAGATGAACAGAT-AAACTCT-TGTC-AGAATCTGGGC-TCCACCCTAAAGCTTGTGTTATCTCATGCAAGGAGAAGACAC-TGTGACCAGTTCCAC-TGAGTTCTCATGAGAAA-ACT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75482319 1041 - 133195287 AAAGAGACAGCCACAACACAGGAGCATGTCCCACACTCCCCAGAGGACACATGAACTCG-ATTTCCAAACATCCCCACTGTAACGCTCAGACTTGAAACTGGGAAGAACGTTGGCTTTCCAATCCTCCTAGCAACTCATAGAAAGCCAGTCAGACACCTCAGGGGATCCTGGGAAGGCCAGCCGGTCTACAT-CCTCACCTACCCACCTGCGGCCAGCGGGTCCTCCTTCACACATCACAGACCACCCATCAGCCTCTCACCCCATGCCAACC-CAACCCATTCCTGTCTCCAGCCCC-------AGAAGCCTCACAAGACAACCAGCC-CAGAGAGAATGACTGGAAGG--A-----CAG-----------------CAGAAGCTGGTTGGCCTGGCTTCACTGTTCCAGCACCTGCTGAGCGAAGGCTCCAATCAGAATGCCTGAATTACC-GACAGACCCGCCAGTTATAGAATGGA-TTC------TCT--------------------CCCAAGT---------------------------CCTGCCTCCCTCCTTC---------------------------CAGCC-----GCCTGCCTATGC-------CCAGCTCACCGTACACCCT-CCTTCCTTAGGCACCGATACTTCAAGCAGCCTCATCTGTCCGGCACAATCTGTACCGCTAGACA--------------------CA-----AGTTTTCCAAAGAGACAATAAACTCCTGGGGGTAAGGGGGGCAGAAGGCATCTTCTTTGTTGCCCTTCTGAGAATCTG-CTGATTTTTAGACACAAAAACACTAGCCATGTGCTATAAAGCACAAAATGGAAGGTGAGAAGGAGGAAGTCAG--TAAGCTAGACTGA-TATTTTCT---------AAAAGCTCCACGATAGAGCAATTGAAAAGGAAAACTTCT---GAAACACAACAGCAGGATATATATGTTCCAGCTAAAAGAACA----AATCC------AGGT-TGGGATATTGTTCATGGTAG------ATATCT-TT-TCATCTTTGCATGCTCGGCACTTAGCCAAGCCTGGTAAAGAGCAGTGACCGGGTACTTGC-------------------------------TGGAGAGATGAACAGAT-AAACTCT-TGTC-AGAATCTGGGC-TCCACCCTAAAGCTTGTGTTATCTCATGCAAGGAGAAGACAC-TGTGACCAGTTCCAC-TGAGTTCTCATGAGAAA-ACT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73346526 1069 - 125196307 AAAGAGACAGCCACAACACAGGAGCATGTCCCACACTCCCCAGAGGACACATGAACTCG-ATTTCCAAACATCCCCACTGTAACGCTCAGACTTGAAACTGGGAAGAACGTTGGCTTTCCAATCCTCCTAGCAACTCATAGGAAGCCAGTCAGACACCTCAGGGGATCCTGGGAAGGCCAGCCGGTCTACAT-CCTCACCTATCCACCTGCGGCCACCGGGTCCTccttcacacatcacagaccacCCATCAGCCTCCCACCCCATGCCAACC-CAACCCATTCCTGTCTCCAGCCCC-------AGCAGCCTCACAAGAGAACCAGCC-CAGAGAGAATGACTGGAAGG--A-----CAG-----------------CAGAGGCTGGTTGGCCTGGCCTCATTGTTCCAGCACCTGCTGAGCGAAGGTTCCAATCAGAAGCCCCGAATTACT-GACAGACCCGCCAGTTATAGAATGGA-TTC------TCT--------------------CCCAAGTCCTGCTCTGTGCTCTCCCCTTGCAaggcctgcctccctccttc---------------------------cagcC-----GCCTGCCTATGC-------CCAGCTCACCGTACACCCT-CCTTCCTTAGGCACCGAAACTTCAAGCAGCCTCATCTGTCCGGCACAATCTGTACCGCTAGACA--------------------CA-----AGTTTTCCAAAGAGACAATAAACTCCTGGGGGTAAGAGGGGCAGAAGGCATCTTCTTTGTTGCCCTTCTGAGAATCTGACTGATTTTTAGACACAAAAACACTAGCCATGTGCTGTAAAGCACAAAATGGAAGGTGAGAAGGAGGAAGTCAG--TAAGCTAGACTGA-TATTTTCT---------AAAAGCTCCACGATAGAgcaattgaaaaagaaaacttct---gaaaCACAACAGCAGGATATATATGTTCCAGCTAAAAGAACA----AATCC------AGGT-TGGGATATTGTTCATGGTAG------ATATCT-TT-TCATCTTTGCATGCTCGGCACTTAGCCAAGCCTGGTAAAGAGCAGTGACCGGGTACTTGC-------------------------------TGGAGAGATGAACAGAT-AAACTCT-TGTC-GGAATCTGGGC-TCCACCCTAAAGCTTGTGTTATCTCATGCAAGGAGAAGACAC-TGTGACCAGTTccac-tgagttctcatgagaag-ACT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72179196 1068 - 125710982 AAAGAGACAGCCACAACACAGGAGCATGTCCCACACTCCCCAGAGGACACATGAACTTG-ATTTCCAAACATCCCCACTGTAATGCTCAGACTTGAAACTGGGAAGAACGTTGGTTTTCCAATCCTCCTAGCAACTCATAGAAAGCCAGTCAGACACCTCAGGGGATCCTGGGAAGGCCAGCCGGTCTACAT-CCTCACCTACCCACCTGCGGCCACCGGGTCCTCCTTCACACATCACAGACCACCCATCAGCCTCCCACCCCACGCCAACC-CAACCCATTCCTGTCTCCAGCCCC-------AGCAGCCTCACAAGAGAACCAGCC-CAGAGAGAATGACTGGAAGG--A-----CAG-----------------CAGAAGCTGGTTGGCCTGGCCTCACTGTTCCAGCACCCGCTGAGCGAAGGCTCCAATCAGAATGCCCGAATTACC-GACAGACCCGCCAGTTATAGAATGGA-TTC------TCT--------------------CCCAAGTCCTGCTCTGTGTTCTCCCCTTGCAAGGCCTGCCTCCCCCCTTC---------------------------CAGCC-----GCCTGCCTATGC-------CCAGCTCACCGTACACCCT-CCTTCCTTAGGCACCGAAACTTCAAGCAGCCTCATCTGTCCAGCACAATCTGCACCACTAGACA--------------------CA-----AGTTTTCCAAAGAGACAATAAACTCCTGGGGGGAAGGGGGGCAGAAGCCATCTTCTTTGTGGCCCTTCTGAGAATCTG-CTGATTTTTAGACACAAAAACACTAGCCATGTGCTATAAAGCACAAAATGGAAGGTGAGAAGGAGGAAGTCAG--TAAGCTAGACTGA-TATTTTCT---------AAAAGCTCCACGATAGAGCAATTGAAAAGGAAAACTTCT---GAAACACAACAGCAGGATATATATGTTCCAGCTAAAAGAACA----AATCC------AGGT-TGGGATATTGTTCATGGTAG------ATATCT-TT-TCATCTTTGCATGCTCGGCGCTTAGCCAAGCCTGGTAAAGAGCAGTGACCGGGTACTTGC-------------------------------TGGAGAGATGAACAGAT-AAACCCT-TGTC-GGAATCTGGGC-TCCACCCTAAAGCTTGTGTTATCTCATGCAAGGAGAAGACAC-TGTGACCAGTTCCAC-TGAGTTCTCATGAGAAG-ACT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75638195 1076 - 121768101 AAAGAAAAGGCCACAACATAGGAGCACATCCCACGCTCCCCAGAGGACACAAGGACTCT---------------------TAACTCTCAGGCTTGAAACTG---AGAATGCTGGCTTTTCAATCCTCCTAGCAACTCACAGGAAGCCAGTCAGACCCCTCGGGGGATCCTGGGAAGGCTAGTAGGTCTACATCCCTCATCTACCCACCTGCGGCCACCGGGTCCTCCTTCACACATCACAAACCACCCAACAGTCTCCCATCCCATGCCAACC-CAGCCCACTCCTCTCTCCGGACCC-------AGCAGCCTCACAAGAGAACCAGCC-CAGAGAGAATGATTGGAAAG--A-----CAA-----------------CAGAGGCTGGTTGGCCTGGCCTCACTTTCCCAGCACCTGCTGAGCTAATGCTCCAATCAGAAGCCCTGAATTCCAAGACAGACCCGCCAGTCACAGAATGGATTTT------TCT--------------------CCCAAGTCCTCCTCTGTGCTCTCCCCTCACCAGGCCTGCCTCCCTCCTTC---------------------------CAGCC-----GTCTGCCTATGC-------CCAGCTCACCATACACCCT-CCTTCCTTAGGCGCCGAAACTTCGAGCACTGTCACCTGTCCTGCACGATCTGTACTGCTAGATATCCACTCGAACATTCAAGTTTG-----GGTTTTCCAAAGACACAATAAACTCCTGGGGGGTAGGGGAGCAGAAGCCATCTTCTTTGTTGCCCTTCTGAGAATCTGACAGATTTTTAGACACAGAACCACTTGCCATGTGCTATAAACCACAAAACGGAAGGTGAGAAGCAGGAAGCCAA--TAAGCTAGGCTGATTATTTTCTGGCACTTATAAAAGCTCCACAATAGAGCAATTAAAAAGGAAAACCTTT---GAAA---AACAGCAGGATATATATGTTCCAGCTAAAAGAGCA----AATGC------AGGT-TGGGATATTGTTCATGGT-G------GTATCT-TTCTCATCTTTGCATGCTCAGCGCTTAGCCAAGCCTGGTATGGA-CAGTGACCAGGTACTTGC-------------------------------TGGAGAGATGGACAGAT-AAACTCT-TGTCTGGAACCTGGGC-TCCACCCTAAAGTTTGTGTTATCTCATTCAAGGAGAAGACGC-TGTGACCAGCTCCAC-TGAGTTCTCATGAGAAG-CCT i calJac3.chr12 C 0 C 0 s mm10.chr14 24231248 1037 + 124902244 AGAGAGAAGATCTTCACGTGGGA-------CCAGTCCCCACAGAGGATTCATAGATACTCACATCCCAACACTGCAACCAGCATTCTCAGGCTTGAAGTTTCGGAAAA-GCTGCTGTTTCAATCC-ACTCCCAACTCACAGATGGCCAGTAAGACCCCTCGGAAGA--CTGGGAA-ACCGGTTGGTGTTCCT-----------------------------------TTCCCATAACACAGACCAC-------------------TGTCAACTGCAATCCTTCCCCA--TCCAGCCCC---TGAGAATGGCTAGACATGGTGACCGGAC-CTGCCTGCATCTCCCACCAGCTA-----CAG----------------CCAGAGGCTGGTGAGCCTGGCCTCATTATCCCCAAGTCTGCC-AGTAAATGCCCTGTTCAGAAGCCCAGGATTCCCATACAGACTT-CTAGTCACAGAAAGAA-AGC------TCTCTGTCGCGTCTCCAAAAACACCCAGCCTTTGCCTTGAGCGCCAACCTTACCACACCTGCCTCCTTCCTTCCTCCTCTCCAGCA---------CCCTGCAGCC-----TTCAGGCCCTGCATCTAGTTCAGCTTAGTGCACATGCTCCCTTGCTTAAGTACCTGGCC----AGGAGTCCAAGGTGCTC------ATCAGTATTGCTAGACA-CAACTC----------ATTCACTTGGGGCTATCCAATGAGATGATAAACTCCACAGGGGAGGGAGGTCAAGAGCCTTC--------------------------------TTTTACACACAAAAGCACTTCCCATAGCCTAAAAACTACAAAAC---AGGTGAGAAGCAAGAAGACAA--TAAGCAAGGCTGG-AGCTTCCAGATGCTTCTACAAGC--------AGAGAGCCTGAACAAGAGAACCCTTTGCGAAA--------CAGAACTTATACGC-----CTATGAGAACA----GACCCGCACTTAGTA-TGGGTCATGGGTGGTGCTGG------AAACTT-TC-TTATGCTCACAGCCTCAGCACGCCGAGGTGTCTACTACCAAGTAGTGGTGAGAAGCAGGC--------TGACAGATGGAG----GGAGGCATGGATAGACAGACAGAT-AAAATCT-GATA-TGGG--TAGGC-TTTACTCTAAAGC--GTGGGATCCAGTGCAAGAGGCCAACACAGGAGAGCAGTTCGAC-TTAG-TCTCATGAGAAG-CTT i mm10.chr14 C 0 C 0 s canFam3.chr4 27791409 1068 + 88276631 AAGGGGCCAG----------GGGACACGGCCCAGAGCTCTCACAGG----------CTG-ACTTCTACACACCCCGGCTAGAACTCACACACTCGGACCTTAGGAAAAACTTAGCTTTTCAATCCACCTAACAAATCAGAGAAAGCCAAGCGGGCATCTCCGAGGACTGTGGGAAGGCCGTTCAGCCTACAC-CCCTCCC----------------------CCTCCTCCTC------------------CAACCCAGCACCCCATGCCAGCA-CTGCCGGTTCC---CTCCGGCTGCACGCTCAAGGCGCCTCACA-GACAACCAATCATAGGGAGAATGACTGGAAGC--AGCAACCAGACCTACCCTGTGCCTCCCGGGGCCGGGTTAGCCTGGCCTCATCTTCCCAGCACCTGCTGAGTGCACATCCCAAGCAGAAGCCTGGGACTCCCGTAAAGACCCACTACTCACAGGATGGA-TTCCGCGAGTCT--------------------CCT-GCTCTCGCCCTGTGTACCGCCTTCACCAGGCCTGCCTTCCCCCTTGCGTGTCTCCTGCACCCACCTAGCCCGTCAGCC-----CTCTGCCCCTGC-------CCAGCGCACAGTACACTCC-AGTCTC-------------CTTAAAGCAACCTCATCTGCTCCGGGGCATCTGTACGGCTGGACAGCTGCTC----CTTTGGGTTGG-----GGCTTTCCAATGAGACAATAAACTCCT--------AGTGGGCAGGGCCCATCTTTTTTGTTG---TTCTGAG------------------------AAACACATACCATTTGCTTTAAACCACCAAACGGAAGGCGAGGAGTAGCAGGTCAA--TAAGCTGGGCTGATTACTTTCTGGCATTTCTAAAAGCTCCAGGATAGAGCAACC-AAGAGAAAAAACTCT---GATGAACA-----AGGGGCTATATACTCCAGCTAAAAGAACGTTTTGGTGC------GGGTCTCTGGTGCTGTTCACAGGTGATGCTAATGTCTGTC-TCACCTTTTCATGCTCCATACTTGGC------------AGAGCAATGACCAGGGACATGCTGCTCGTGTGACAGGTGGGGAGACAGATGAATGGACAGATCGACAGGT-AAAATCTGGGTC-TGAATCTAGGC-TCCACCCTAAAGTCAG-GTAAACTCATGCAA---GAAGACAC-TGTGGTCAGCTCCAG-TGAGTGTTCATGAGAAG-CCT i canFam3.chr4 I 8 C 0 a score=40407.000000 s hg38.chr10_KI270825v1_alt 147931 12 + 188315 GAAGATGAGGGA s panTro4.chr10 76525826 12 + 133524379 GAAGATGAGGGA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76194558 12 - 133410057 TAAGATGAGAGA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35131645 12 + 104879549 TAAGATGAGGGA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73922796 12 - 130959383 TAAGATGAAGGA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75483360 12 - 133195287 TAAGATGAAGGA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73347595 12 - 125196307 TAAGATGAGGGA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72180264 12 - 125710982 TAAGATGAGGGA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75639271 12 - 121768101 TAAGAGGAGGGA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27792477 12 + 88276631 TAAAATGAGGAA i canFam3.chr4 C 0 C 0 e mm10.chr14 24232285 0 + 124902244 C a score=27030.000000 s hg38.chr10_KI270825v1_alt 147943 10 + 188315 GGTTacagaa s panTro4.chr10 76525838 10 + 133524379 GGTTacagaa i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76194570 10 - 133410057 GGTTACAGAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35131657 10 + 104879549 GGTTacagaa i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73922808 10 - 130959383 GGTCacagaa i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75483372 10 - 133195287 GGTCacagaa i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73347607 10 - 125196307 Ggtcacagaa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72180276 10 - 125710982 GGTCacagaa i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27792489 10 + 88276631 GGTTGAggga i canFam3.chr4 C 0 I 182 e mm10.chr14 24232285 0 + 124902244 C e calJac3.chr12 75639283 0 - 121768101 C a score=451383.000000 s hg38.chr10_KI270825v1_alt 147953 209 + 188315 aaccaaatactgcatgttc-tcactcctaagtgagagttga-----------------------------------------------------------------------------------acaatgagaacac-atggacacaaggagg-ggaacatcacacaccagggcctgtcaggggtgggggtctaggagagggatagcaacagaagaaatacctaatgtagatgacgggttgatgggtgcagcaaaccaccatggcacgtgtatacctatgtaacaagcctgcgtg s panTro4.chr10 76525848 209 + 133524379 aaccaaatactgcatgttc-tcactcctaagtgagagttga-----------------------------------------------------------------------------------acaatgagaacac-atggacacaaggagg-ggaacatcacacaccagggcctgtcaggggtgggggtctaggagagggatagcaacagaagaaatacctaatgtagatgacgggttgatgggtgcagcaaaccaccatggcacatgtatacctatgtaacaagcctgcgtg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76194580 285 - 133410057 AACCAAACACTGCATGTTCTTCACTTC----------CTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcaatgagaacactttggacacaggtaggagaaacatcacacaccagggcctgtcagagtttgtggtctaggagagggatagcaatagaagaaacacctaatgtagatgacgggttgatgggtgcagcaaaccaccatggcaggtgtatacctatgtaacaagcctgcgtg i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35131667 200 + 104879549 aaccaaacaccgcatgttc-tcactcctaagtgggagttta--------------------------------------------------------------------------------------------acac-atagacacagggagg-ggaacatcacacaccgggaactgtcaggggtgggggtctaggagagggacagcaataggagaaacacctaatgtagatgacaggttgatgggtgcagcaaaccaccatagcacgtgtatacctatgtaacaagcctgcgtg i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73922818 209 - 130959383 aaccaaataccgcatgttc-tcactcctaagtgggagttga-----------------------------------------------------------------------------------acaatgagagcac-atggacacagggagg-ggaacatcgcacaccagggccggtcaggggtgggggtctaggagaggaatagcaataggaaaaatacctaatgtagatgacgggttgatgggtgcagcaaaccaccatggcacgtgtatacctatgtaacaagcctgcgtg i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75483382 209 - 133195287 aaccaaataccgcatgttc-tcactcctaagtgggagttga-----------------------------------------------------------------------------------acaatgagagcac-atggacacagggagg-ggaacatcgcacaccagggccggtcaggggtgggggtctaggagaggaatagcaataggaaaaatacctaatgtagatgacgggttgatgggtgcagcaaaccaccatggcacgtgtatacctatgtaacaagcctgcgtg i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73347617 209 - 125196307 aaccaaataccgcatgttc-tcactcctaagtgggagttga-----------------------------------------------------------------------------------acaatgagagcac-atggacacagggagg-ggaacctgGCACACCAGGGCTGGTCAGGGGTGGGGGTCTAGGAGAGGAATAGCaataggaaaaatacctaatgtagatgacgggttgatggatgcagcaaaccaccatggcacgtgtatacctatgtaacaagcctgcatg i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72180286 209 - 125710982 aaccaaataccacatgttc-tcactcctaagtgggagttga-----------------------------------------------------------------------------------acaatgagagcac-atggacacagggagg-ggaacatcgcacgccagggccagtcaggggtgggggtctaggagaggaatagcaataggaaaaatacctaacgtagatgacgggttgatgggtgcagcaaaccaccacagcacgtgtatacctatgtaacaagcctgcgtg i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27792499 182 + 88276631 I e mm10.chr14 24232285 0 + 124902244 C e calJac3.chr12 75639283 0 - 121768101 C a score=60977.000000 s hg38.chr10_KI270825v1_alt 148162 24 + 188315 ttctgcacatgtaccccagaactt s panTro4.chr10 76526057 24 + 133524379 ttctgcacatgtaccccagaactt i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76194865 24 - 133410057 ttctgcacatgtaccccagaactt i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35131867 24 + 104879549 ttctgcacgtgtaccccagaactt i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73923027 24 - 130959383 ttctgcacatgtaccccagaactt i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75483591 24 - 133195287 ttctgcacatgtaccccagaactt i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73347826 24 - 125196307 ttctgcacatgtaccccagaactt i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72180495 24 - 125710982 ttctgcacatgtaccccagaactt i chlSab2.chr9 C 0 C 0 s mm10.chr14 24232285 14 + 124902244 TTCTGTATGTG-------GGA--- i mm10.chr14 C 0 C 0 e canFam3.chr4 27792499 182 + 88276631 I e calJac3.chr12 75639283 0 - 121768101 C a score=43669.000000 s hg38.chr10_KI270825v1_alt 148186 26 + 188315 aaaggtatt----------aaaaaaaaaa----TGAGGGT s panTro4.chr10 76526081 28 + 133524379 aaaggtatt--------aaaaaaaaaaaa----TGAGGGT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76194889 26 - 133410057 aaaagtatt----------aaaaaaaaaa----TGAGGGA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35131891 30 + 104879549 aaaagtatt----------taaaaaaaaaaTTTTGAGGGA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73923051 27 - 130959383 aaa-gtatt--------aaaaaaaaaaaa----TGAGGGA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75483615 29 - 133195287 aaa-gtattta------aaaaaaaaaaaa----TGAGGGA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73347850 25 - 125196307 aaa-gtatt----------aaaaaaaaaa----tgaggga i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72180519 27 - 125710982 aaa-gtatt--------aaaaaaaaaaaa----TGAGGGA i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27792681 26 + 88276631 ----------aaaaaaaaaGAAAAAAAAA----TGAGGGA i canFam3.chr4 I 182 C 0 e mm10.chr14 24232299 0 + 124902244 C e calJac3.chr12 75639283 0 - 121768101 C a score=3960637.000000 s hg38.chr10_KI270825v1_alt 148212 1061 + 188315 GGCTGAGGACAAAAGATCAAGACTACATGAAATTTCACAACTTCCCACAGAAA-CAAGGACAGCTGGTCACCGTTTTGTTCTCTCTCCCTGGGCTCACAAAATCG-GGGGAAATGCAACAAGATACAGAAAGGTGGTTTGCCATTTTCTAGCAAAAATGAGT-GGGGGGATACATAGGCGCATATATACTCACACCCACAGCCCCTAAACTCTAAACCGCCATGGGTTTAGCTCCGTTTTTTTCAGGAGAAGGACTCAAAACCAGCACATTTTGGT-TTTGTTTACTTTCCTGCTTTTTCTTGGATCCAGCTCCTACTGAGATTGGCTATCAGGGTGGGTCCCAACTCAGTGTCCACGGGGCCTTATCCTCTTATCTTTATAAAAGGCTTTTTTCCCTGGGACAAGAGGCCCGGTGGCCTCATTTTCCTGCCTGAACTCTGCCCTGTGACTAAGCAAGAAGAAGCCACGGCAGCCAGCACCCAGAGTTTCTGCTGTGTCACAAA--AAGGAGTC----ATGG----GTCTCCCTGCCAGCATCAGACCCATTCCCCGACTCAGCACTCAATTTAGATATCACGTCCTACGTCTACATCCAGAAAGCCC-CCAGTGTGACAGATGCTCAGAACACATCTGCTGAATGAATGGACGAATGCTGTGACGAAGAGAGGTGGAGAGGTAGGCAAGGCTCAGACCACAGA------AAT--------GG------TCACAGGGTGGCCTGCAGTACCGAGTAAAGGTAGTCATTAtcaaaaaactgacaaggactccagggcttgcctagcctctcagcagctgatggccctgagcaggctaccaaac-tc----tactggccgagtgtgcccatctgtaaaagataaatatcaattgcagaggctgataaaagattTTTTTCATTGATCAGGAATTAAAGGCTGTAGCTCAAGTCCAGAAACTGGGATGCTGTGTCACTTGCTCACCCTCACTGTAAAGGCTGGTGCCCACAAAGCCAGGAGAATGTCAGGAAAAACTAGCCACGGAT--------CTGAGACTTCCCACCCAGCCTGCTCCTGGTAAAGAAGTCTTGGAAGGAACCCCAGCCT s panTro4.chr10 76526109 1060 + 133524379 GGCTGAGGACAAAAGATCAAGACCACATGAAATTTCACAACTTCCCACAGAAA-CAAGGACAGCTGGTCACCATTTTGTTCTCTCTCCCTGGGCTCACAAAATCG-GGGGAAATGCAACAAGATACAGAAAGGTGGTTTGCCATTTTCTAGCAAAAATGAGT-GGGGGGATACATAGGCGTATATATACTCACACCCACAGCCCCTAAACTCTAAACCGCCATGGGTTTAGCTCCGTTTTTTTCAGGAGAAGGACTCAAAACCAGCACATTTTGGT-TTTGTTTACTTTCCTGCTTTTTCTTGGATCCAGCTCCTACTGAGATTGGCTATCAGGGTGGGTCCCAACTCAGTGTCCACAGGGCCTTATCCTCTTATCTTTATAAAAGGCTTTTTTCCCTGGGACAAGAGGCCCGGTGGCCTCATTTTCCTGCCTGAACTCTGCCCTGTGACTAAGCAAGAAGAAGCCACGGCAGCCAGCACCCAGAGTTTCTGCTGTGTCACAAA--AAGGAGTC----ATGG----GTCTCCCTGCCAGCATCAGACCCATTCCCCGACTCAGCACTCAATTTAGATACCACGTCCTACGTCTACATCCAGAAAGCCC-CCAGTGTGACAGATGCTCAGAACACATCTGCTGAATGAATGGACGAATGCTGTGACGAAGAGAGGTGGAGAGGTAGGCAAGGCTCAGACCACAGA------AAT--------GG------TCACAGGGTGGCCTGCAGTACCGAGTAAAGGTAGTCATTATCAAAAAACTGACAAGGATTCCAGGGCTTGCCTAG-CTctcagcagctgatggccctgagcaggctaccaaac-tc----tactggccgagtgtgcccatctgtaaaagataaatatcaattgcagaggctgataaaagattTTTTTCATTGATCAGGAATGAAAGGCTGTAGCTCAAGTCCAGAAACTGGGATGCTGTGTCACTTGCTCACCCTCACTGTAAAGGCTGGTGCCCACAAAGCCAGGAGAATGTCAGGAAAAACCAGCCACGGAT--------CTGAGACTTCCCACCCAGCCTGCCCCTGGTAAAGAAGTCTTGGAaggaaccccagcct i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76194915 1061 - 133410057 GGCTGAGGACAAAAGATCAAGACTACATGAAATTTCACAACTCCTCAAAGAAA-CAAGGACAGCTGGTCACCATCTTGTTCTCTCTCCCTGGGCTCACAAAATCG-GGGGAAATGCAACAAGATACAGAAAGGCGGTTTGCCATTTTGTAGCAAAAATGAGT-GGGGGGATACATAGGCGTATATACACTCACACCCACAGCCCCTAAACTCTAAACTGCCATGGGTTTAGCTCTGTTTTTTTCAGGAGAAGGACTCAAAACCAGCACATTTTGGT-TTTGTTTACTTTCCTGCTTTTTCTTGGATCCAACTCCTACTGAGGTTGGCTATCAGGGTGGGTCCCAACTCAGTGTCCATGGGGCCTTATCCTCTTATCTTTATAAAAGGCTTTTTTCCCTGGGACAAGAGGCCCGGTGGCCTCATTTTCCTGCCTGAACTCTGCTCTGTGACTAAGCAAGAAGAAGCCACGGCAGCCAGCACCCAGAGTTTCTGCTGTGTCACAAA--AAGGAGTC----ATGG----GTCTCCCTGCCAGCATCAGACCCATTCCCCGACTCAGCACTCAATTTAGATATCACGTCCTACGTCTGCATCCAGAAAGCCC-CCAGTGTGACAGATGCTCAGAACACATCTGCTGAATGAATGGACGAATGCTGTGACGAAGAGAGGTGGAGAGGTAGGCAAGGCTCAGACCACAGA------AAT--------GG------TCACAGGGTGGCCTGCAGTACCGAGTAAATGTAGTCATTAtcaaaaaactgacaaggactccagggcttgcctagcctctcagcagctgatggccctgagcaggctaccaaac-tc----tactggccgagtatgcccatctgtaaaagataaatatcaattgcagaggctgataaaagattTTTTTCATTGATCAGGAATGAAAGGCTGTAGCTCAAGTCCAGAAACTGCGATGCTGTGTCACTTGTTCACCCTCACTGTAAAGGTTGGTGCCCACAAAGCCAGGAGAATGTCAGGAAAAACCAGCCACAGAT--------CTGAGACTTCCCACCCAGCCTGGTCCTGGTAAAGAAGTCTTGGAaggaaccccagcct i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35131921 1059 + 104879549 GGCTGAGGACAAAAGATCAAGACTACATGAAATTTCACAACTTCCCACAGAAA-CAAGGACAGCTGGTCACCGTTTTGTCCTCTCTCCCTGGGCTCACAAAATCG-GGGGAAATGCGACAAGATACAGAAAGGTGGTTTGCCATTTTCTAGCGAAAGTGAGT-GGGGGAATACATAGGTGTATATATACTCACATCCACAGCCCCTAAACTCTAAACCGCCATGGGTTTAGCTCTGTGTTTTTCAGGAGAAGGACTCAAAACCAGCATATTTTAGT-TTTGTTTACTTTCCTGCTTTTTCTTGGATCCAGCTCCTACTGAGGTTGGCTATCAGGGTGGGTCCCAACTCAGTGTCCATGGGGCCTTATCCTCTTATCTTTATAAAAGGCTTTTTTCCCTGGGACAAGAGGCCGGGTGACCTCATTTTCCTGCCTGAACTCTGCCCTGTGACTAAGCAAGAAGAAGCCACGGCAGCCAGCACCCAGAGTTTCCGCTGTGTCACATA--AAGGAGTC----ATGG----GTCT-CCTGCCAGCATCGGACCCATTCCCTGACTCAGCACTCAGTTTAGATATCACGTCCTACGTCTGCATCCAGAAAGCCC-CCAGTGTGACAGATGCTCATAACACATCTGCTGAATGAATGGACGAATGCTGTGACAAGGAGA---GGAGAGGTAGGCAAGGCTCAGACCACAGA------AAT------GGGG------TCACAGGGTGGCCTGCAGTACCGAGTACATGCAGTCATTATCAAGAAGCTGACAAGGACTCCAGGGCTTGCCTAGCCTCTCAGCAGCTGATGGCCCTGAGCAGGCTACCAAAC-TC----TACTGGCAGAGTACGCCCATCTGTAAAAGATAAATATCAATTGCAGAGGCTGATAAAAGACTTTTTTCATTGATCAGGAATGAAAGGCTGTAGCCCAAGTCCAGAAACTGGGATGCTGTGTCACTTGCTCACCCTCACTGCAAAGGCTGGTGCCCACAAAGCCAGGAGAAGGTCAGAAAAAACCAGCCACGAAT--------CTGAGACTTCCCACCCAGCCTGCTCCTGGTAAAGAAGTCTTGGAAGGAACCCCAGCCT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73923078 1055 - 130959383 GGCTGAGGACAAAAGATCAAGATTACATGAAATTTCACAACTTCCCACAGAAA-CAAGGACAGCTGGTCACTGTTTTGTTCTCTCTCCCTGGGCTCACAAAATTG-GGGGGAACATGACAAGATACAGAAAGGTGGTTTGCCATTTTCTAGCGAAAATGAGT-GGGGGAATACATAGGCATATATATACTCACACCCACAGCCCCTAAACTCTAAATCGCTGCGGGTTTAGCTCTGTTTTATTCAGGAGGAGGACTCAAAACGAGCACATTTTGGT-TTTGTTTACTTTCCTGTTTTTTCTTGGATCCAGCTCCTACTGAGGTTGGCTATCAGGGTGGGTCCCAACTCAGTGTCCATGGGGCTTTATTGTCTTATCTTTATAAAAGGCTTTTCTCCCTGGGACAAGAGGCCCGGTGGCCTCATTTTCCTGCCTGAACTCTGCCCTGTGACTAAGCAAGAAGAAGCCACAGCAGTCAGCACCCAGAGTTTCCACTGTGTCATAAA--AAGGAGAC----GTGG----GTCT-CCTGCCAGCATCAGACCCATTCCCTGACTCAGCACTCAATTTAGATATCACGTCCTACGTCTGCATCCAGAAAGCCC-CCAGTGTGACGGATGCTCAGAATACATCTGCTGAATGAATGGACGAATGCTGTGATGATGAGA---GGAGAGGTAGGCAAGGCTCAGACCACAGA------AAT--------GA------TCACAGGGTGGCCTGCAGTACTGAGTAAATGCAGTCATTATCAAGAACCTGACAAGGACTCCAGGGCTTGCCTAGCCTCTCAGCAGCGGATGGCCCTGAGCAGGCTGCCAAAC-TC----TACTGGCCAAGTGTGCCCATCTGTAAAAGACAAATATCAATTGCAGAGGCTGA-AAAAGATTTTTTTCATTG-TTAGGAATGAAAGGCTGTAGCCCAAGTCCAGAAACTGGGATGCTGTGTCACTTGCTCACCCTCACTGTAAAGGCTGGTGCCCACAAAGCCAGGAAAAGGTCAGGAAAAACCAGCCACGGAT--------CTGAGACTTCCCACCCAGCCTGCTCctggcaaagaagtcttagaaggaaccccagcct i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75483644 1055 - 133195287 GGCTGAGGACAAAAGATCAAGATTACATGAAATTTCACAACTTCCCACGGAAA-CAAGGACAGCTGGTCACTGTTTTGTTCTCTCTCCCTGGGCTCACAAAATTG-GGGGGAACATGACAAGATACAGAAAGGTGGTTTGCCATTTTCTAGCGAAAATGAGT-GGGGGAATACATAGGCATATATATACTCACACCCACAGCCCCTAAACTCTAAATCGCTGCGGGTTTAGCTCTGTTTTATTCAGGAGGAGGACTCAAAACGAGCACATTTTGGT-TTTGTTTACTTTCCTGTTTTTTCTTGGATCCAGCTCCTACTGAGGTTGGCTATCAGGGTGGGTCCCAACTCAGTGTCCATGGGGCTTTATTGTCTTATCTTTATAAAAGGCTTTTCTCCCTGGGACAAGAGGCCCGGTGGCCTCATTTTCCTGCCTGAACTCTGCCCTGTGACTAAGCAAGAAGAAGCCACAGCAGTCAGCACCCAGAGTTTCCACTGTGTCATAAA--AAGGAGAC----GTGG----GTCT-CCTGCCAGCATCAGACCCATTCCCTGACTCAGCACTCAATTTAGATATCACGTCCTACGTCTGCATCCAGAAAGCCC-CCAGTGTGACGGATGCTCAGAATACATCTGCCGAATGAATGGACGAATGCTGTGATGATGAGA---GGAGAGGTAGGCAAGGCTCAGAACACAGA------AAT--------GA------TCACAGGGTGGCCTGCAGTACTGAGTAAATGCAGTCATTATCAAGAACCTGACAAGGACTCCAGGGCTTGCCTAGCCTCTCAGCAGCGGATGGCCCTGAGCAGGCTGCCAAAC-TC----TACTGGCCAAGTGTGCCCATCTGTAAAAGATAAATATCAATTGCAGAGGCTGA-AAAAGATTTTTTTCATTG-TTAGGAATGAAAGGCTGTAGCCCAAGTCCAGAAACTGGGATGCTGTGTCACTTGCTCACCCTCACTGTAAAGGCTGGTGCCCACAAAGCCAGGAAAAGGTCAGGAAAAACCAGCCACGGAT--------CTGAGACTTCCCACCCAGCCTGCTCctggcaaagaagtcttagaaggaaccccagcct i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73347875 1055 - 125196307 ggctgaggacaaAAGATCAAGATTACATGAAATTTCACAACTTCCCACAGAAA-CAAGGACAGCTGGTCACTGTTTTGTTCTCTCTCCCGGGGCTCACAAAATCG-GGGGGAATACGACAAGACACAGAAAGGTGGTTTGCCATTTTCTAGCGAAAATGAGG-GGGAGAATACATAGGCATATATATACTCACACCCACAGCCCCTAAACTCTAAATTGCCACGGGTTTAGCTCTGTTTTATTCAGGAGAAGGACTCAAAACAAgcacattttggt-tttgtttacttTCCTGTTTTTTCCTGGATCCAGCTCCTACTGAGGTTGGCTATCAGGGTGGGTCCCAACTCAGTGTCCATGGGGCTTTATTGTCTTATCTCTATAAAAGGCTTTTCTCCCTGGGACAAGAGGCCCGGTGGCCTCATTTTCCTGCCTGAACTCTGCCCTGTGACTAAGCAAGAAGAAGCCACAGCAGTCAGCACCCAGAGTTTCCACTGTGTCATAAA--AAGGAGAC----ATGG----GTCT-CCTGCCAGCATCAGACCCATTCCCTGACTCAGCACTCAATTTAGATATCACGTCCTACGTCTGCATCCAGAAAGCCC-CCAGTGTGACGGATGCTCAGAATAcatctgctgaatgaatggacGAATGCTGTGATGATGAGA---GGAGAGGTAGGCAAGGCTCAGACCACAGA------AAT--------GA------TCAGAGGGTGGCCTGCAGTACTGAGTAAATGCAGTCATTATCAAGAACCTGACATGGACTCCAGGGCTTGCCTGGCCTCTCAGCAGCGGATGGCCCTGAGCAGGCTGCCAAAC-TC----TACTGGCCAAGTGTGCCCATCTGTAAAAGATAAATATCAATTGCAGAGgctga-aaaagatttttttcattg-ttaggAATGAAAGGCTGTAGCCCAAGTCCAGAAACTGGGATGCTGTGTCACTTGCTCACCCTCACTGTAAAGGCTGGTGCCCACAAAGCCAGGAAAAGGTCAGGAAAAACCAGCCACGGAT--------CTGAGACTTCCCACCCAGCCTGCTCCTGGCAAAGAAGTCTTAGAAGGAACCCCAGCCT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72180546 1055 - 125710982 GGCTGAGGACAAAAGATCAAGATTACATGAAATTTCACAACTTCCCACAGAAA-CAAGGACAGCTGGTCACTGTTTTGTTCTCTCTCCCTGGGCTCACAAAATCG-GGGGGAATACGACAAGATACAGAAAGGTGGTTTGCCATTTTCTAGCGAAAATGAGG-GGGGGAATACATAGGCATATATATATTCACACCCACAGCCCCTAAACTCTAAACCGCCACGGGTTTAGCTCTGTTTTATTCAGGAGGAGGACTCAAAATGAGCACATTTTGGT-TTTGTTTACTTTCCTGTTTTTTCTTGGATCCAGTTCCTACTGAGGTTGGCTATCAGGGTGGGTCCCAACTCAGTGTCCACGGGGCTTTATTGTCTTATCTTTATAAAAGGCTTTTCTCCCTGGGACAAGAGTCCTGGTGGCCTCATTTTCCTGCCTGAACTCTGCCCTGTGACTAAGCAAGATGAAGCCACAGCAGTCAGCACCCAGAGTTTCCACTGTGTCATAAA--AAGGAGAC----GTGG----GTCT-CCTGCCAGCATCAGACCCATCCCCTGACTCAGCACTCAATTTAGATATCACGTCCTACGTCTGCATCCAGAAAGCCC-CCAGTGTGACAGATGCTCAGAACACATCTGCTGAATGAATGGACGAATGCTGTGATGACGAGA---GGAGAGGTAGGCAAGGCTCAGACCACAGA------AAT--------GA------TCACAGGGTGGCTGGCAGTACTCAGTAAATGCAGTCATTATCAAGAACCTGACAAGGACTCCAGGGCTTGCCTAGCCTCTCAGCAGCGGATGGCCCTGAGCGGGCTGCCAAAC-TC----TACTGGCCAAGTGTGCCCATCTGTAAAAGATAAATATCAATTGCAGAGGCTGA-AAAAGATTTTTTTCATTG-TTAGGAATGAAAGGCTGTAGCCCAAGTCCAGAAACTGGGATGCTGTGTCACTTGCTCACCCTCACTGTAAAGGCTGGTGCCCACAAAGCCGGGAAAAGGTCAAGAAAAACCAGTCACGGAT--------CTGAGACTTCCTACCCAGCCTGCTTTTggcaaagaagtcttggaaggaaccccaggct i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75639283 1054 - 121768101 GGCTGAGGACAAAAGATCAAGATTACATGAAATTTCACAACTTCCCATGGAAA-CAAGGACAGCTGGTCACTGTTTTGTTCTCTCTCCCTGGGATCACAAAATCGAGGGAAAATATGACAAGATACAGAAAGGTGGTTTGCCATTTTCTAGCAAAAATGAGT-GGAAGAATACATAGGCATATATATATTCTCACTCACAGTCCCTAACCTCTAAACCACCACGGGTTTAGCACAATTTTTTTC---AGAAGGACTCAAAACCAACACATTTTGGT-TTTGCTTACTTTCCTGCTTTTTCTTGGATCCAGCTCCTACTGAGGCTGGCTATCAGGGTGGGCCCCAACTCAGTGTCCATAGGCCCTTATCCTCTTATCTTTATAAAAGGCTTTTTTCCCTGGGACAAGATGCCCAGTGGCCTCATTTTCCTGCCTGAACTCTGCCCTGTGACTAAGCAAGCAGCAGCCAGGGCAGTCAGCACCCAGAACTTCTGCTGTATCACAAA--AAGGAGAC----ATGG----GTCT-CCTGCCAGCATCAGACCCGTTCTCTGACTCAACACTCAATTTAGATCTCACATCCTGTGTCGGCATCCAGAAAGCCC-CCAGTGTGACAGATGCACAGAACACATCTGCTGAATGAATGAACGAATGCTGTGATGAGAAGA---GGAGAGGTATGCAAGGCTCAGGACACAGA------AAT--------GG------TCACAGGATGGCCTGCAGTACAGACTGAACGCAGTCATTAtcaagaaactgacaaggactccagggcttgcctagcctttcaacagctggtggccctgagccagctgccaaac-tc----tcctagccaagtttgcccatctgtaaaacgtaaatgtcaatTGCAGAGGCTGATAAAAGATTATTTTCATTGATCAGGAATGAAAGGCTGCAGCACAAGTCCAGAAACTAGGATGCTGTGTCGCTTGTTCACCCTCACGGTAAAGGCTGGTGCCTGCAAAGCCAGGCAAAGGTCAGGAAAAACCAGCCATGGCT--------CTGAGACTTCC-ACCCAGCCTGCTCctggcagagaagtcttggaaggagccccagcct i calJac3.chr12 C 0 C 0 s mm10.chr14 24232299 1031 + 124902244 AGCTGGAGGCAGGAGAGTTAG-TTATACGAGACTTGACCACTTCCCACAGAAT-C-AGGGTGGCTGAT-ACTACTCTGTTCCCCCTCCCTGAGTCCGTAGAACAGAGCAGGCCAATGACAAGATGTATACAGGTCACCTACCATTTTCTATCAGCAATGAGG-GGA-----ACATAGACTTGGGAGCATTCACA--CAAAGCCCCTGAAAATTGGGTTCCCCCAGATCTAACATTGTT---TTCAGGGGAGGGGGTACAGAACCCCAAGTTAGGGT-TCTATATAATTTCTCCCTTTCTTCTGGATCCAG-TCCCCCTAAAGCTAGCCACCCGGGTGGACTCTGACTCAGGCTCTGTGGGCCTCTAACATGTTATTTTTGGGAAAAG-TTTTTCCTCTGAGACAGAGACTCAGGAAAGC----ATTCCTGCTTGAACTTTGACCTGTGACTAAGCACCAAGGAGTCAGGAGCATCAGTAAC--GGGGTTTTGCTGTGTCACAGG--AAGAAAGCCACACAGA----GGCT-CCTGCCAAAGTCAGGCCCATTCTCTGACTCAGCACCAAATTTAGACTTCATGTTCTAGGACT--ATCCAAAAGCCCC-ATCTGGCAACAGGTGCTCAGAACCCAAATGCTAAAGGCAT----CAGTGATGGGATGCAAAGG---GGAGGGGTACCCCAGGCTCAGGACCCAGA------AATCTCAATGGGG--ACTTTCACAGGAAGGCCTGCGGGAGAGAACAAACACAGCCTTTATGAAGGAAGGGACAAGGACTCCAGCGCTTGCC-AGCCTCAGAGCAGCTGGTGG-CCTGAGAGAGCAGTGAAAC-ACTCAATACTGGCCTACTTTACCCAACTGTAGAACACAAATATCAACCACATGGGCTGGTAAAGGATTGGGTTCAATGCCTGGGACT--AAAGCTGGAGTGCAGCTTAGCACACTGGGGTATCCTGTTACTTGCCCATGCTTACGG----------------CTACGCCAGGCCTACATGAGGAAAACGCAGCCCAGACTTTCAGACACCAAGACACCCCAGCCAAGCTACTCC--------AAGTCTGAAAGGGGATCCTAGCTC i mm10.chr14 C 0 C 0 s canFam3.chr4 27792707 1058 + 88276631 GGTTGAGAGCAGAAGAACGACCTTACACGAAATTCCCCAACTTGGCACAGAAAGTAAAGACAACTGCTCACTGCTTTGTTTCCTCTCCCTGGGCTCATAAACTGGAGAGAAAATAGGACAGGATTTATAAAGGTGGTCTGACATTTTCTATCAGAAACAAGTCAGGAGAATAGACAGGCTTGTATGCTCTCATACACGTAGACCCTAAATTCTAAGCTGCCTCAGGTTCAGCTGTACTCTTTCCAT-AGAAGGACCCAGAAGCACTACATTTTAGTCTTTCATTACTTTTTTGCTTTTTCCTAGATCCTGTTCCCACCAAG-TTAACCATGGAGGTGGGTCCCAACTCAGGATCCACGGGCCTTTACCCTCTTATCTTTGTTCAATGCTTTCTCCTCTGGAGCAAGAGGCTCCATGGCATCATTTTCCTGTCTGAACTCTGTCCTGTGACTAAGCAATAAGAAGCCACGGCAGGCAGCTCTGGATGTTTCTGCTGTGTCACAAAAGAATGAGAC----AAGGAGGTACCT-CCTGCCAATATCAAACCCATCCTCTGACTCAGCACTAAATTTAGATGTCACATCCTATGTCTACATCCAGAGAGTCCGTCGGTTTGACAGGTGC-------------------TGAATGAATGAACGCTGTGACAAGGAGG---GGAGGGGTGTCCAAGGCTAGGGAC-CAGACGTCTCAAT--------GGGGACCTTCATCGGATGGGCCAGAGTCCAgaacaaatgcagtctttataaagaaactgacaaggactccaaagcctgcccagcctcttagcagctggtggccctgagcaggccgacaagcgtc----tcttggctcagtgtgcccatgtgcagaacgtaaataccaactgcacagactga-taaagatttttctcaatggtcaggcatgagaagctaccgtacagccccatgaacagagatgcc-tgtcatttgctcagcctcactggaaaggctggGACCTGCAGAGCCAGGCCCAGATCAGGAAAAACCAGCCAAGGTTC-------CCGAGACTCCCCACCCAGCTTGTGGCTGGCACAGACACCTTGGAAGGAGCCTCAACCT i canFam3.chr4 C 0 C 0 a score=-2683.000000 s hg38.chr10_KI270825v1_alt 149273 13 + 188315 ---GGGAAGAGAC-------------------------------------------------------------------------CTG s panTro4.chr10 76527169 86 + 133524379 ---gggaagagacctggatcctgtatccacctctgccagtggcatgccatgaaatcctggtcaagtcactttgtgtctcaggactactg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76195976 86 - 133410057 ---gggaagagacctggatcctgtatccagctctgccagtggcatgccatgaaatcctggtcaagtcactttgtgtctcaggactactg i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73924133 13 - 130959383 ---gggaagagac-------------------------------------------------------------------------ctg i rheMac3.chr9 C 0 I 71 s macFas5.chr9 75484699 13 - 133195287 ---gggaagagac-------------------------------------------------------------------------ctg i macFas5.chr9 C 0 I 71 s papAnu2.chr9 73348930 13 - 125196307 ---GGGAAGAGAC-------------------------------------------------------------------------CTG i papAnu2.chr9 C 0 I 71 s chlSab2.chr9 72181601 13 - 125710982 ---gggaagagac-------------------------------------------------------------------------ctg i chlSab2.chr9 C 0 I 467 s calJac3.chr12 75640337 86 - 121768101 ---gggaagagacctagatcctgtgtccagctctgacaatggcagacaatgagatcctggtcaagtcactttgtgtcttaggactgctg i calJac3.chr12 C 0 C 0 s mm10.chr14 24233330 32 + 124902244 ---------------------------------------------------------CAGATCTGCCTctttgtgtccttagactgcta i mm10.chr14 C 0 C 0 s canFam3.chr4 27793765 86 + 88276631 GCGAAGaagatacctgggtcctgtgccca-ctctgccaaagacgtgctctaagagcccggtggagt--ctctgtgtctgtggactgctg i canFam3.chr4 C 0 C 0 e nomLeu3.chr18 35132980 0 + 104879549 C a score=197297.000000 s hg38.chr10_KI270825v1_alt 149286 85 + 188315 tttctcatttgtaa-aataaggagtttgggcaaagtggtttctaagatcccttccagccatggcattcaacaatcataGGCTCCTT s panTro4.chr10 76527255 85 + 133524379 tttctcatttgtaa-aataaggagtttgggcaaagtggtttctaagatcccttccagccatggcattcaacaatcataGGCTGCTT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76196062 85 - 133410057 tttctcatttgtaa-aataaggagtttgggcgaagtggtttctaagatcccttccagccatggcattcaacaatCATAGGCTGCTT i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73924217 85 - 130959383 tttctcattcgtaa-aagaaggagtttgggcgaagtggtttctaagatcccttccagccatggcacccaacaatcataGGCTGCTT i rheMac3.chr9 I 71 C 0 s macFas5.chr9 75484783 85 - 133195287 tttctcattcgtaa-aagaaggagtttgggcgaagtggtttctaagatcccttccagccatggcaCCTAACAATCATAGGCTGCTT i macFas5.chr9 I 71 C 0 s papAnu2.chr9 73349014 82 - 125196307 TTTCTCATTCGTAA----AAGGTGTTTGggcaaagtggtttctcagatccCTTCCAGCCATGGCACCCAACAATCATAGGCTGCTT i papAnu2.chr9 I 71 C 0 s calJac3.chr12 75640423 85 - 121768101 tttctcatttgtaa-aataaagagtttgggcaaggtggtctctaagatcccttccagccatggcactctacaatCACAGGCTGCTT i calJac3.chr12 C 0 C 0 s mm10.chr14 24233362 79 + 124902244 gttttcctgtgtag-aat-gggagcttggac----tagtctctgagatcctttccaacCGTGTC-TTCAACAGCTGAGGCCCGCTT i mm10.chr14 C 0 C 0 s canFam3.chr4 27793851 86 + 88276631 ttgctcatttacaaaaataagctgtttgggcaaagtggtctctaagaccccttccaaccttgatactccacaatgttaAGCTGCTT i canFam3.chr4 C 0 C 0 e nomLeu3.chr18 35132980 0 + 104879549 C e chlSab2.chr9 72181614 467 - 125710982 I a score=15606.000000 s hg38.chr10_KI270825v1_alt 149371 4 + 188315 AAGA s panTro4.chr10 76527340 4 + 133524379 AAGA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76196147 4 - 133410057 AAGA i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73924302 4 - 130959383 AAGA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75484868 4 - 133195287 AAGA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73349096 4 - 125196307 AAga i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72182081 4 - 125710982 aaga i chlSab2.chr9 I 467 C 0 s calJac3.chr12 75640508 4 - 121768101 AAAA i calJac3.chr12 C 0 C 0 s mm10.chr14 24233441 4 + 124902244 AAGA i mm10.chr14 C 0 I 595 s canFam3.chr4 27793937 4 + 88276631 AAGA i canFam3.chr4 C 0 C 0 e nomLeu3.chr18 35132980 0 + 104879549 C a score=6552.000000 s hg38.chr10_KI270825v1_alt 149375 2 + 188315 AA s panTro4.chr10 76527344 2 + 133524379 AA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76196151 2 - 133410057 AA i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73924306 2 - 130959383 AA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75484872 2 - 133195287 AA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73349100 2 - 125196307 aa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72182085 2 - 125710982 aa i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75640512 2 - 121768101 AA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27793941 2 + 88276631 AA i canFam3.chr4 C 0 I 277 e mm10.chr14 24233445 595 + 124902244 I e nomLeu3.chr18 35132980 0 + 104879549 C a score=1004791.000000 s hg38.chr10_KI270825v1_alt 149377 469 + 188315 TGTAggccgggcgtcgtggttcacatctgtaatcccagcactttggggggccaaggcaggtggatcacctgaagtc-agagtttgagatcagcccgaccaacatgataaaacgccgtctctactaaaaataccaaaaattacctgggtgtgatggcacacgcctgtaatcccagctactggggaggctgagacacaagaatctcttgaacctggaagtcagaggttgcagtgagctgagactgcacc-------actgcactctagtctggagtgcagcctgtgtgacagagcgagattctgtctgaaggaaaaaaaaaaaaaaaaaaaaaaCATAAACAGGAAAAGAAGTTCTGGTCAGATGAGAAGAAAGGTTACTTGGAATGAGAATAGAGGTTACCATGAATACTGAAAAGGCCACTATATAT----TTTTTTTAAGAATTAAAGtgtttt--------attgattg----attgattgattgagacag s panTro4.chr10 76527346 468 + 133524379 TGTAggccaggcgtcgtggctcacatctgtaatcccagcactttggggggccaaggcaggtggatcacctgaagtc-agagtttgagatcagcctgaccaacatgataaaaccccgtctctactaaaaataccaaaaatgacctgggtgtgatggcacacgcctgtaatcccagctactggggaggctgagacacaagaatctcttgaacccggaagtcagaggttgcagtgagctgagactgcacc-------actgcactccagtctggagtgcagcctgtgtgacagagcgagattctgtctgaagg-----gaaaaaaaaaaaaaaaacataaaCAGGAAAAGAAGTTCTGGTCAGATGAGAAGAAAGGTTACTTGGAATGAGAATAGAGGTTACCATGAATACTGAAAAGGCCACTATATAT----TTTTTTTAAGAATTAAAGTGTTTT----attgattgattg----attgattgattgagacag i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76196153 472 - 133410057 TGTAggccgggcgtggtggctcacacctgtaatcccagcactttggggggccaaggcaggtggaccacctgaagtcaagagtttgagatcagcctgaccaacatgatgaaacaccgtctctactaaaaataccaaaaattacctaggtgtgatggcgcacgcctgtaatcccagctactggggaggctgagacacaagaatctcttgaacccggaagtcagaggttgcagttagctgagactgcacc-------actgcactccagtctggagtgcagcctgtgtgacagagcgagattctgtctgaagg------aaaaaaaaaaaaaaaacataaaCAGGAAAAGAAGTTCTGGTTAGATGAGAAGAAAGGTTACTTGGAATGAGAATAGAGGTTACCATGAATACTGAAAAGGCCACTATATAT----TTTTTTTAAGAATTAAAGTGTTTTattgattgatcgattg----attgattgattaagacag i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73924308 464 - 130959383 TGTAggccgggcgtggtggctcaggcctgtaatcccagcactttggggggccaaggtgggtggatcacctgaagtcaggagtttgagatcagcctgaccaacatgatgaaaccccgtctctactaaaaataccaaaaatgacctgagtgtgatggcgcacgcctgtaatcccagctcctgaggcggctgagacacaagaatctcttgaacccggaaggcagaggttgaagtgagctgagactgcgcc-------gctgcactccaccctggagtgcagcctgggtgacagagcgagattctgtctgaagg------gaaaaaaaaaaaaaaacataaaCAGGAAAAGAAGTTCTGGCCAGATGAGAAGAAAGGTTAGTTGGAGTGAGAATAGAGGTTACCATGAATACTGAAAAGGCCACTATATATATATTTTTTTTAAGAATTGA----TTTT--------ATTGAGTG----ATCGATTGAttgagacag i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75484874 466 - 133195287 TGTAggccgggcgtggtggctcaggcctgtaatcccagcactttggggggccaaggtgggtggatcacctgaagtcaggagtttgagatcagcctgaccaacatgatgaaaccccgtctctactaaaaataccaaaaatgacctgagtgtgatggcgcacgcctgtaatcccagctcctgaggcggctgagacacaagaatctcttgaacccggaaggcagaggttgaagtgagctgagactgcgcc-------gctgcactccaccctggagtgcagcctgggtgacagagcgagattctgtctgaagg---aaaaaaaaaaaaaaaaaaacataaaCAGGAAAAGAAGTTCTGGCCAGATGAGAAGAAAGGTTAGTTGGAGTGAGAATAGAGGTTACCATGAATACTGAAAAGGCCACTATATATATA-TTTTTTTAAGAATTGA----TTTT--------ATTGAGTG----ATCGATTGAttgagacag i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73349102 474 - 125196307 tgtaggccgggcgtggtggctcaggcctgtaatctcagcactttggggggccaaggtgggtggatcacctgaagtcaggagtttgagatcagcctgaccaacatgatgaaaccccgtctctactaaaaataccaaaaatgacCTGagtgtgatggcgcacacctgtaatcccagctcctgaggaggctgagacacaagaatctcttgaacccggaaggcagaggttgaagtgagctgagactgcgttgaagtgagctgagacccagcctggagtgcagcctgggtgacagagcgagattctgtttgaagg--aaaaaaaaaaaaaaaaaaaacataaacaggAAAAGAAGTTCTGGCCAGATGAGAAGAAAGGTTAGTTGGAGTGAGAATAGAGGTTACCATGAATACTGAAAAggccactatatatata-tttttttaagaattga----tTTT--------ATTGAGTG----Atcgattgattgagacag i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72182087 471 - 125710982 TGTAggccgggcgtggtggctcaggcctgtcatcccagcactttggggggccaaggtgggtggatcacctgaagtcaggagtttgagatcagcctgaccaacatgatgaaaccctgtctctactaaaaataccaaaaatgacctgggtgtgatggcgcacgcctgtaatcccagcttctgaggaggctgagacacaagaatctcttgaacccggaaggcagaggttgaagtgagccaagactgcgcc-------gctgcactccaggctgcagtgcagcctgggtgacagagcgagattctgtctgaagg-ggggaaaaaaaaaaaaaaaaaCATAAACAGGAAAAGAAGTTCTGGCCAGATGAGAGGAAAGGTTAGTTGGAGTGAGTATAGAGGTTACCATGAATACTGAAAAGGCCACTATATATAT--TTTTTTTAAGAATTGA----TTTT--------ATTGAGTGAGCAATTGATTGAttgagacag i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75640514 454 - 121768101 GGTAggccaggcgtggtggctcacaccagtaatcctagcactttaggaggccaaggcaggaggatcacctgaagtcaggagttccagaccagcctgaccaacatgatgaaaccccgtctctactaaatatactaaaagttagccgggcatggtggtgcatgcctgtaatcccagctactcagaaggctagggcacaagaatcgcttgaaccccggaggcagaggttgcagtgaactgagatcgcgcc-------actgtactc------------caacctgggtgacagagtgagattctgtctgaaag--gaaaaaaaaaaaaaaaaaaaCGTAAACAGGAAAAGAAGTTCTGGCCAGATGAG----AAAGTTACCTGGAATGAGAATAGAGGTTACCATGGATACAGAAAAGGCCACTGTAT------TTTCTTTACTAATTAAAGTGTTCG----ATTGATTGATTG----ACTGGCTGACtgagataa i calJac3.chr12 C 0 C 0 e canFam3.chr4 27793943 277 + 88276631 I e mm10.chr14 24233445 595 + 124902244 I e nomLeu3.chr18 35132980 0 + 104879549 C a score=794442.000000 s hg38.chr10_KI270825v1_alt 149846 268 + 188315 ggtcttactgtccacccaggttggagtgcactggcccaatctcagctcatgcaac--ctctacctgtcaggttcaagggatcctcccacctcagtctcccaagcaactgggaccacaggcatgcgcca-------cagctaatttttgtattttttgtacagatggggtctccctatgttgctcaggctggtctcgaactcctgggctcaagcaatccgcctgcctcccaaagtgctggaattacaggtgtaagctaccacacctagccAGAATTAA s panTro4.chr10 76527814 268 + 133524379 ggtcttactgtccacccaggttggagtgcactggcccaatctcagctcatgcaac--ctctacctgtcaggttcaagggatcctcccacctcagtctcccaagcaactgggaccacaggcatgcgcca-------cagctaatttttgtattttttgtacagatggggtctccctatgttgctcaggctggtctcgaactcctgggctcaagcaatccgcctgcctcccaaagtactggaattacaggtgtaagctaccacacccagccAGAATTAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76196625 268 - 133410057 ggtcttactgtccacccaggttggagtgcagtggcccaatctcagctcatgcaac--ctctacctctcagcttcaagggatcctcccacctcagcctcccaagcaactgggaccacaggcatgtgcca-------cggctaatttttgtattttttgtacagatggggtctccctatgttgctcaggctggtctcgaactcttgggctcaagcaatctgcctgcttcccaaagtgctggaattacaggtgtaagccaccacacccagccCGAATTAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35132980 277 + 104879549 GGCCTTACTGGCcacccaggttggagtgcagtggcccaatctcagctcatgcaacctctctacctctcaggttcaagggatcctcccacctcagcctcccaagtaactgggaccacaggcatgtaccaccacgcccggctaatttttgtattttttgtagagatggggtctccctatgttgcttaggctggtctcaaactcctgggctcaagcaatctgcctgcctcccaaagtgctggaattataggtgtgagctaccacgcccagccAGAATTAA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73924772 275 - 130959383 ggtcttactgtccacccaggttggagggcagtggcctgatctcagctcatgcaag--ctatacctcccaggttcaagggatcctcccacctcagcctcccaagtaactgggaccacaggcatgcaccactacgcccagctaatttttgaattttttgtagagatggggtctccctatgtggctcaggcaggtctcgaactcctgggctcaagcaattcgcctgcctcccaaagtgctgggattataggtgtgagctaccatgcccagccAGAATTAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75485340 275 - 133195287 ggtcttactgtccacccaggttggagggcagtggcctgatctcagctcatgcaag--ctatacctcccaggttcaagggatcctcccacctcagcctcccaagtaactgggaccacaggcatgcaccactacgcccagctaatttttgaattttttgtagagatggggtctccctatgtggctcaggcaggtctcgaactcctgggctcaagcaattcgcctgcctcccaaagtgctgggattataggtgtgagctaccatgcccagccAGAATTAA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73349576 275 - 125196307 ggtctcactgtccacccaggttggagggcagtggcctgatctcagctcatgcaag--ctatacctcccaggttcaagggatcctcccacctcagcctcccaagtaactgggaccacaggcatgcaccactacgcccagctaatttttgaattttttgtagagatggggtctccctatgtggctcaggcaggtctcgaactcctgggctcaagcaatttgcctgcctcccaaagtgctgggattataggtgtgagctaccatgcccagccagaattaa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72182558 275 - 125710982 ggtcttactgtccacccaggttggagggcagtggcctgatctcagctcatgcaag--ctatacctcccaggttcaagggatcctcccacctcagcctcccaagtaactgggatcacaggcatgcaccaccatgcccagctaatttttgaattttttgtagagatggggtctccctatgtggctcaggcaggtctcgaactcctgggctcaagcaattcacctgcctcccaaagtgctgagattataggtgtgagctaccatgcccagccAGAATTAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75640968 273 - 121768101 ggtcttactgt-cacccaggttggagtgcagtggctcaatctcagctcatgcaac--ctctacccaccaggctcaagggatcctgccaccgcagcctcccaagcaagtgggaccacaggtatgctccaccatgcctggctagtttttgtattttttgtagacacagggtctccctatgttgctcaagctggtctcaaactcccaggctcaagcaatccacccgcctcccaaagtgctgg-attataggtgtgagctaccacacACAGACAGAATTAA i calJac3.chr12 C 0 C 0 e canFam3.chr4 27793943 277 + 88276631 I e mm10.chr14 24233445 595 + 124902244 I a score=164859.000000 s hg38.chr10_KI270825v1_alt 150114 59 + 188315 AGTATTTTAAAGTATTACTTCTTACGTTAAAATATGTAAATAGAATTAGATTTTGTTTC s panTro4.chr10 76528082 59 + 133524379 AGTATTTTAAAGTATTACTTCTTACATTAAAAtatgtaaatagaattagattttgtttc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76196893 59 - 133410057 AGTATTTTAAAGTATTACTTCTTACGTTAAAAtatgtaaatagaattagattttgtttc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35133257 59 + 104879549 AGTATTTTAAAGTATTACTTCTTACGTTAAAATATGTAAATAGAATTAGATTTTGTTTC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73925047 48 - 130959383 A-----------TATTACTTCTTACGTTAAAATATGTAAATAGAATTAGATTTTGTTTC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75485615 48 - 133195287 A-----------TATTACTTCTTACGTTAAAATATGTAAATAGAATTAGATTTTGTTTC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73349851 48 - 125196307 a-----------tattacttcttacgttaaaatatgtaaatagaattagattttgtttc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72182833 59 - 125710982 AGTATTTTAAATTATTACTTCTTACGTTAAAAtatgtaaatagaattagattttgtttc i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75641241 58 - 121768101 G-TATTTTAAAGTATTGCTTATTACATGAAACTATGTAAATAGAATTAGGTTTCATTTC i calJac3.chr12 C 0 C 0 s canFam3.chr4 27794220 58 + 88276631 AATTTTTTTAAGCATGACTTCTTATATCACAAtataaaaacaaaattaagttt-atttc i canFam3.chr4 I 277 C 0 e mm10.chr14 24233445 595 + 124902244 I a score=498390.000000 s hg38.chr10_KI270825v1_alt 150173 160 + 188315 CTTTGTTTTGCTATCACCTTCCTCAATATTGGCTGGAAAGATCTTTACTACATTTGGATAGCAGATTGGCAATGGTCAAAT--ATGT----GCAGATTTAATTTGGGGACTCAGGGGTCATCTT--AGAGCCAGGGAGGTACCATTCAGACAAGCAAACTGGGGTGGA s panTro4.chr10 76528141 160 + 133524379 ctttgttttgctatcaccttcctcaatattggctggaaagatctttactacattcggatagcagattggcaatggtcAAAT--ATGT----GCAGATTTAATTTGGGGACTCAGGGGTCATCTT--ACAGCCAGGGAGGTACCATTCAGACAAGCAAACTGGGGTGGA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76196952 161 - 133410057 ctttgttttgctatcaccttcctcaatattggctggaaagatctttactacatttggatagcagattggcaatggtcAAAT-GATGT----GCAGATTTAATTTGGGCACTCAGGGGCCATCTT--AGAGCCAGGGAGGTACCATTCAGACAAGCAAACTGGCATGGA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35133316 161 + 104879549 CTTTGTTTTGCTATCACCTTCCTCAATATTGGCTGGAAAGATCTTTACTACATTTGGATAGCAGATTGGCAATGGTCAAAT-GATGT----GCAGATTTAATTTGGGGACTCAGGGGCCATCTT--AGAGCCAGGGAGATACCATTCAGACAAGCAAACTAGCGTGGA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73925095 155 - 130959383 CTTTGTTTTGCTATCACCTTCCTCAGTATTGGCTGGAAAGATCTTTACTAC------ATAGCAGATTGGCAATGGTCAAAT-GATGT----ACGGATTTAATCTGGGGACTCAGGGGCCATCTT--AGAGCCCGGGAGGGACCATTCAGACAAGCAAACTGGCGTGGA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75485663 155 - 133195287 CTTTGTTTTGCTATCACCTTCCTCAGTATTGGCTGGAAAGATCTTTACTAC------ATAGCAGATTGGCAATGGTCAAAT-GATGT----ACGGATTTAATCTGGGGACTCAGGGGCCATCTT--AGAGCCCGGGAGGGACCATTCAGACAAGCAAACTGGCGTGGA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73349899 155 - 125196307 ctttgttttgctATCACCTTCCTCAGTATTGGCTGGAAAGATCTTTACTAC------ATAGCAGATTGGCAATGGTCAAAT-GATGT----GCGGATTTAATCTGGGGACTCAGGGGCCATCTT--AGAGCCCGGGAGGGACCATTCAGACAAGCAAACTGGCGTGGA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72182892 161 - 125710982 ctttgttttgctatcaccttcctcaatattggctggaaagatctttactacatttcgatagcagattggcaatggtcaaat-gatgt----gaggatttaatctggggactcaggggccatctt--agagcccgggagggaccattcagacaagcaaactggcgtgga i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75641299 153 - 121768101 CTTTGTTTTGGTATCATTTTCC-CAATATTGGCTGGACAGATCTTTA----ATTTGGATAGCAGATTGGCAATGGTCAAAACAATAT----GCAGA-TTGATTTGGGAACTAGGGGGTCATCTT--AGAGTCAGGGAGGT---ATTCAGACAAGCAAGCTGGCGTGGA i calJac3.chr12 C 0 C 0 s mm10.chr14 24234040 149 + 124902244 CTCTGCTATGCGGTCATTTTTT---AAAATGGCGAGAGAGATTTTCAGCATGTGTGAAAAGCAT--------TTGTCAAAA-GA-AA----ACAGATTTG-TTTGCAGGTCTAGGGG-CATCTTAAAGAGTCAGACATGTGCCATGCAGACATGTAAACTGAGAGAGA i mm10.chr14 I 595 I 1789 s canFam3.chr4 27794278 154 + 88276631 ----catttggtatcacatcactccctactggccagacagattttca---cacgtggacagaagattcacaatggtcaaaatgaggtctaaggagattcccttgggggtccca--ggccatttt--aaag---gacatataccattcagacaagtaacccgaagttaa i canFam3.chr4 C 0 C 0 a score=826710.000000 s hg38.chr10_KI270825v1_alt 150333 268 + 188315 CTCTGAAGAAGAG-----------GTTTGAGAGGCATGCCACATCTATAAAAATCCTGTTGGCAGGGAAAACACACCCTGGCTTGAGGTGGCCACCAGGGCAGCAGCTCTGAGTCAGAGATGGCCATCTCTAATGGCACCGCTTTCCACACGGGCAGCCCTGCAGCCCCCACG-GCAGGCTGCATGTTAGCAGGAGCTTGTTTACGCAT-----AAAAACGAACAGTTCTCTTATGCAATAGAGGGGTAAGGCAAACAAGTGATAACATTTTCTT------AAAAAAAAAA s panTro4.chr10 76528301 274 + 133524379 CTCTGAAGAAGAG-----------GTTTgagaggcatgccacatctataaaaatcctgttggcagggaaaacacaccctggcttgaggtggccaccagggcagcagctctgagtcagagatggccatctctaatggcaccgctttccacacgggcagccctacagcccccacg-gcaggctgcatgttagcaggagcttgtttaCGCAT-----AAAAACGAACAGTTCTCTTATGCAATAGAGGGGTAAGGCAAACAAGTGATAACATTTTCTTaaaaaaaaaaaaaaaa i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76197113 272 - 133410057 CTCTGAGGAAGAG-----------GTTTgagaggcatgccacatctataaaaatcctgttggcagggaaaacacaccctggcttgaggtagccaccagggcagcagctctgagtcagaggtggccatctctaatggcaccgctttccacacgggcagccctgcagcccccacg-gcaggctgcatgttagcaggagcttgtttatGCAT-----AAAAACGAACAGTTCTCTTATGCCATAGAGGGGTAAGGCAAACAAGTGATAACATTTTCTT--AAAAAAAAAAATAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35133477 270 + 104879549 CTCTGAGGAAGAG-----------GTTTgagaggcatgccacatctataaaaatcctgtgggcagggaaaacacaccctggcttgaggtggctaccagggcagcagctctgagtcagaggtggccatccctaatggcactgctttccacatgggcagccctgcagcccccacg-gcaggccgcatgttagcaggagcttgtttacgcat-----aaaaacgaacagttctctcatgcaacagaggggtaaggcaaactagTGATAACATTTTTCT----TAAAATAAATAA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73925250 284 - 130959383 CTCTGAGGAAGAGGTCTGGGAACTGTCTGAGAGGCATGCCACATCTATAAAAATCCTGCGGGTGGGGAAAACACACCCTGGCTTGAGGCAGCCACCAGGGCAGCAGCTCTGAGTCAGAGGGGGCCATCTCAAATGGCACTGCTTTCCACCTGGGCAGCCTTGCAGCCCCCACG-GTAGGCTGCATGTTAGCAGGAGCTTGTTTACGCAT-----AAAAACGAATAGTTCTCTTATGCAATAGAGGGGTAAGGCAAACTAGTGATAACATTTTCTT-TAAAAAAATACATAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75485818 284 - 133195287 CTCTGAGGAAGAGGTCTGGGAACTGTCTGAGAGGCATGCCACATCTATAAAAATCCTGCGGGTGGGGAAAACACACCCTGGCTTGAGGCAGCCACCAGGGCAGCAGCTCTGAGTCAGAGGGGGCCATCTCAAATGGCACTGCTTTCCACCTGGGCAGCCTTGCAGCCCCCACG-GTAGGCTGCATGTTAGCAGGAGCTTGTTTACGCAT-----AAAAACGAATAGTTCTCTTATGCAATAGAGGGGTAAGGCAAACTAGTGATAACATTTTCTT-TAAAAAAATACATAA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73350054 284 - 125196307 CTCTGAGGAAGAGGTCTGGGAACTGTCTGAGAGGCATGCCACATCTATAAAAATCCTGTGGGCGGGGAAAACACACCCTGGCTTGAGGCAGCCACCAGGGCAGCAGCTCTGAGTCAGAGGGGGCCATCTCTAATGGCACCGCTTTCCACCTGGGCAGCCTTGCAGCCCCCACG-GTAGGCTGCATGTTAGCAGGAGCTTGTTTACGCAT-----AAAAACTAATAGTTCTCTTATGCAATAGAGGGGTAAGGCAAACTAgtgataacattttctt-taaaaaaataaataa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72183053 276 - 125710982 ctctgaggaagaggtctgagaactgtctgagaggcatgccacatctataaaaatcctgtgggcggggaaaacacaccctggcttgaggcagccaccagggcagcagctctgagtcagaggggaccatctctaatggcaccgctttccacccaggcagccttgcagcccccacg-gtaggctgcatgttagcaggagcttgtttacgcat-----aaaaacgaatagttctcttatgcaacagaggggtaaggcaaactagTGATAACATTTTCTT-AAAAA--------AA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75641452 282 - 121768101 CTCTGAGGAAGAGGTCTGAGAACTGTCTGAGAAACGTGCCACACCTATAAAAATCCTGTGGGCAGGGAAAACATACCCTGGCTAGAGGAGGCCACCAGGGCAGCAGCTCTGAGTCAGAGGTAGTCATCTCTAATGACACGGCTTTCCACAC-GACAGCCCTGCGGCCCCCACT-GCAGGCTGCATGTTAGCAGGAGCTTGCTTACACAT-----AAAAACTAATAGTTCTCTTATGCAATGTAGATGTAAGGCAAACCACTGACAACATTTTCTT-aaaaaaaaaaaaaa- i calJac3.chr12 C 0 I 266 s canFam3.chr4 27794432 224 + 88276631 --cacagaaagag-----------gcccgAGA-ACACTGCACAT------------------------GGGCACAC-------TGAGCCA---ACTCTGGCAGCAGCTCAGAGTTGTGGGGGACCACCAC--------CTGCTTCCCACACAGGCAGCTTCTGGGGCTCCACGTGCAGGCTACGCATCAGCAGGGCCTGATTTATGCATGCGGCAATGGCTAACAGTTCTTTTATGCAATGTAGGGGTCATGCCGGTTAGTGACAATATT------AAAAAAAGAA----- i canFam3.chr4 C 0 I 353 e mm10.chr14 24234189 1789 + 124902244 I a score=6178.000000 s hg38.chr10_KI270825v1_alt 150601 4 + 188315 AAAA s panTro4.chr10 76528575 4 + 133524379 aaaa i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76197385 4 - 133410057 ACAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35133747 4 + 104879549 GTAA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73925534 4 - 130959383 ATAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75486102 4 - 133195287 ATAA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73350338 4 - 125196307 ataa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72183329 4 - 125710982 ATAA i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27794656 353 + 88276631 I e mm10.chr14 24234189 1789 + 124902244 I e calJac3.chr12 75641734 266 - 121768101 I a score=848700.000000 s hg38.chr10_KI270825v1_alt 150605 275 + 188315 ACAggctgggtgtggcaactcatgcctgtgatcccaacactttgggaggctgaggagggaggatcacttaaggccaggagttcaagaccagcctgggcaacacagcgagaccccatctctatgaatttttttttttaattagctcagcatgatggtgggtacctgttgtcctagctactcagggaggctgaggcaggaggatcgcctgagcccaggagttcaagattacattgagctaggatcatgccatcaatcatgacagcatgggcaacagg s panTro4.chr10 76528579 273 + 133524379 aCAggctgggtgtggcaactcatgcctgtgatcccaacactttgggaggctgaggagggaggatcacttaaggccaggagttcaagaccagcctgggcaacacagcgagaccccatctctatgaa--tttttttttaattagctcagcatgatggtgggtacctgttgtcctagctactcagggaggctgaggcaggaggatcacctgagcccaggagttcaagattacattgagctaggatcatgccatcaatcatgacagcatgggcaacagg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76197389 274 - 133410057 ACAggctgggtgtggcggctcatgcctgtgatcccaacactttgggaggctgaggagggaggatcacttaaggccaggagttcaagaccagcctgggcaacacagcaagaccccatctctatgaa-atttttttttaattagctcagcatgatgatgggtacctgttgtcctagctactcagggaggctgaggcaggaggatcacctgagcccaggagttcaagattacattaagctaggatcatgccatcaatcatgacagcatgggcaacaga i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35133751 274 + 104879549 ACAggctgggtgtggcagctcatgcctgtgatcccaacactttgggaggctgaggagggaggatcacttaaggccaggagttcaagaccagcctgggcaacacagcgagaccccatctttatgaa-atttttttttaattagctcagcatgacggtgggtacctgttgtcctagctactcagggaggctgaggcaggaggatcgcctgagcccaggagttcaagattacactgagctaggatcatgccatcggtcatgacagcatgggcaacaga i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73925538 275 - 130959383 ACAggttgggtgtggcagctcacgtctgtgatcccaacactttaggaggctgaggagggaggatcacttaaggccaggagttcaagaccagcctgggcaacacagcaagaccccatctccatgaaaaaaattttttaattagctaatcatgatggtgggtacctgttgtcctagctactcagagaggctgaggcaggaggatcacctgagcccaggagttcgagattacaatgagctaggatcatgccatcgatcatgacagcatgggcaacaga i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75486106 275 - 133195287 ACAggttgggtgtggcagctcacgtctgtgatcccaacactttaggaggctgaggagggaggatcacttaaggccaggagttcaagaccagcctgggcaacacagcaagaccccatctccatgaaaaaatttttttaattagctaatcatgatggtgggtacctgttgtcctagctactcagagaggctgaggcaggaggatcacctgagcccaggagttcgagattacaatgagctaggatcatgccatcgatcatgacagcatgggcaacaga i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73350342 275 - 125196307 acaggttgggtgtggcagctcatgtctgtgatcccaacactttaggaggctgaggagggaggatcacttaaggccaggagttcaagaccagcctgggcaacacagcaagaccccatctccatgaaaaaatttttttaattagctaatcatgatggtgggtacctgttgtcctagctactcagagaggttgaggcaggaggatcacctgagcccaggagttcgagattacaatgagctaggatcatgccatcGATCATgacagcatgggcaacaga i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72183333 275 - 125710982 ACAggttgggtgtggcagctcacgtctgtgatcccaacactttaggaggctgaggagggaggatcacttaaggccaggagttcaagaccagcctgggcaacacagcaagaccccatctccatgaaaaaatttttttaattagctaatcatgatggtgggtacctgttgtcctagctactcagagaggctgaggcaggaggatcacctgagcccaggagttcgagattacaatgagctaggatcatgccatcgatcatgacagcatgggcaacaga i chlSab2.chr9 C 0 I 7 s calJac3.chr12 75642000 274 - 121768101 ACAggctgggtgtggcagctcatacctgtgaccccaacactttgggaggctgaaaagggaggattgc-taaggccaggagttcaagaccagcctgggcaatacagcaagaccccatctctatgaaaaaatttttttaattagctgagcatgacggtgggcacctgttttcctagctactcagggaggctgaggcaggaggatggcctgagcccaggagtttgaggttacaatgagctaagatcaggccattaatcatgactgcatgggcaacagg i calJac3.chr12 I 266 C 0 e canFam3.chr4 27794656 353 + 88276631 I e mm10.chr14 24234189 1789 + 124902244 I a score=25823.000000 s hg38.chr10_KI270825v1_alt 150880 10 + 188315 gtaagaccct s panTro4.chr10 76528852 10 + 133524379 gtaagaccct i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76197663 10 - 133410057 gtaagacctt i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35134025 10 + 104879549 gtaagaccct i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73925813 10 - 130959383 gtaagaccct i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75486381 10 - 133195287 gtaagaccct i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73350617 10 - 125196307 gtaagaccct i papAnu2.chr9 C 0 C 0 s calJac3.chr12 75642274 10 - 121768101 gtaagaccct i calJac3.chr12 C 0 C 0 e canFam3.chr4 27794656 353 + 88276631 I e mm10.chr14 24234189 1789 + 124902244 I e chlSab2.chr9 72183608 7 - 125710982 I a score=156342.000000 s hg38.chr10_KI270825v1_alt 150890 73 + 188315 gtctcttt----aaaaaaaaaaaaaaaaaaaGGTTAATTTT----TCTATTTATATCTATCT----ATCAAtttatttatagaga s panTro4.chr10 76528862 70 + 133524379 gtctcttt-------aaaaaaaaaaaaaaaaGGATAATTTT----ACAATTAATATCTATCT----ATCAATTTATTTATAGAGA i panTro4.chr10 C 0 M 404 s ponAbe2.chr10 76197673 82 - 133410057 gtctcttta---aaaaaaaaaaaaaaaaaaaGGATAATTTTTCTGTCTATTCATATCTATCTATTAATCAAtttatttatagaga i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35134035 69 + 104879549 gtctctc--------aaaaaaaaaaaaaaaaagataaTTTT----TCTATTTATATCTATCA----ATCAAtttatttatagaga i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73925823 83 - 130959383 gtctctt--aaaaaaaaaaaaaaaaaaaaaaaGATACTTTTTCTATCTATTTATATCTATCTATCTATCAAtttatttatagaga i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75486391 77 - 133195287 gtctctt--------aaaaaaaaaaaaaaaaaGATACTTTTtctatctatttatatctatctatctatcAAtttatttatagaga i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73350627 80 - 125196307 gtctctt-----taaaaaaaaaaaaaaaaaaagatattttttctatctatttatatctatctatctatcaatttatttatagaga i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72183615 85 - 125710982 gtctctttaaaaaaaaaaaaaaaaaaaaaaaaGATCCTTTTtctatctgtttatatctatctatctatcAAtttatttttagaga i chlSab2.chr9 I 7 C 0 s calJac3.chr12 75642284 67 - 121768101 gtctcttaaattaaaaaaataaataaaTAGAGGATAATTTT--------------TCTATCT----ATCTATTTATTTATAGAGA i calJac3.chr12 C 0 C 0 e canFam3.chr4 27794656 353 + 88276631 I e mm10.chr14 24234189 1789 + 124902244 I a score=529276.000000 s hg38.chr10_KI270825v1_alt 150963 237 + 188315 tggggt-agggtctcactatgttgcccaggttggagtgcagtagctattcacaggcatgaccccaccactgatcagcatgagag-ttttaacc----------------tgctccatttctgacctccttaggcaacctggtggtctcctgctcccag--ggtcaccatattgatgccaaactggccacctgattagcatagca--------cactacagcccagaactcttgggctcaag---------cgatcctccctcctcagcctccca s ponAbe2.chr10 76197755 239 - 133410057 tggggt-ggggtctcactatgttgcccaggctggagtgcaatagctattcacaggcatgaccccaccactgatcagcatgagag-tttttacc----------------tgctccatttctgacctccttaggcaacctggtggtcccccgctcccaggaggtcaccatattgatgccgaactggccatccgattagcatagca--------cactacagcccagaactcttgggctcaag---------cgatcctccctcctcagcctccca i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35134104 239 + 104879549 tggggt-ggggtctcactatgttgcccaggctggagtgcagtagctattcacaggcatgaccccaccactgatcagcatgagag-ttttgaca----------------tgctccatttcggacctccttaggcaacctggtggtcccccgctcccaggaggtcaccatattgatgccaaactggccacccgattagcatagcg--------cattacagcccagaactcttgggctcaag---------cgatcctccctcctcagcctccca i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73925906 264 - 130959383 tggggt-ggggtctcactacgttgcccacgctacagtacagtagctattcaaaggcatgatcccaccactgatcagcatgagagtttttgacatgctccatttctgacctgctccatttctgacttccttaggcaacctggtggtcccctgctcccaggaggtcaccatactgatgccgaaccggccacctgattagcatagcagcatagcgcactacagcccagaactcctgggctcaag---------cgatcctcccgcctcagcctccca i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75486468 264 - 133195287 tggggt-ggggtctcactacgttgcccacgctagagtacagtagctattcaaaggcatgatcccaccactgatcagcatgagagtttttgacatgctccatttctgacctgctccatttctgacttccttaggcaacctggtggtcccctgctcccaggaggtcaccatactgatgccgaaccggccacctgattagcatagcagcatagcgcactacagcccagaactcctgggctcaag---------cgatcctcccgcctcagcctccca i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73350707 272 - 125196307 tggggt-ggggtctcactacattgcccaggctagagtacagtagctATTCAAAGGCATGATCCCACCACTGATCAGCATGAGAG-TTTTGACATGCTCCATTTCTGACCTGCTCCATTTCTGActtccttaggcaacctggtggtcccctgCTCCCAGGAGGTCACCATACTGATGCCGAACCGGCCACCTGATTAGCATAGCAGCATAGCgcactacagcccagaactcctgggctcaagctatcctcccgatcctcccgcctcagcctccca i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72183700 244 - 125710982 tggggt-ggggtctcactacgttgcccaggctggagtacggtagccactcaaaggcatgaccccaccactgatcagaatgagag-ttttgaca----------------tgctccatttctgacttccttaggcaacctggtggtcccctgctccc---aggtcaccatactgatgccgaaccggccagctgattagcatagcagcatagcgcactacagtccacaactcctgggctcaag---------tgatcctcccgcctcagcctccca i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75642351 240 - 121768101 TGGGGTGggggtctcactatggtgcccaggctggagtgcagtggctatttacagccatgaccccaccactgatcagcatgggag-ttctgacc----------------tgctccatttctgacctccttaggcaacttgctggtacccctctcccaggaggtcaccctattgatgccaaacctgccatctggttggcatagtg--------cactacagcccagaactcctgggctcaag---------ggatcctcccgcctcagcctcctg i calJac3.chr12 C 0 C 0 e canFam3.chr4 27794656 353 + 88276631 I e mm10.chr14 24234189 1789 + 124902244 I e panTro4.chr10 76528932 404 + 133524379 M a score=114006.000000 s hg38.chr10_KI270825v1_alt 151200 37 + 188315 agtagctaggactacaggaacatgccagcatgcccAC s panTro4.chr10 76529336 37 + 133524379 AGTAGCTAGGACTACAGGAACATGCCAGCATGCCCAC i panTro4.chr10 M 404 C 0 s ponAbe2.chr10 76197994 37 - 133410057 agtagctaggactacaggaacatgccaacatgccGAC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35134343 37 + 104879549 agtagctaagactacaggaacatgccagcatgcccAC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73926170 37 - 130959383 agtagctaggactacaggaacatgccagcacgcccAC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75486732 37 - 133195287 agtagctaggactacaggaacatgccagcacgcccAC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73350979 37 - 125196307 agtagctaggactacaggaacatgccagcACGCCCAC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72183944 37 - 125710982 agtagctaggactacaggaacatgccagcacgcccAC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75642591 37 - 121768101 agtagctatgactacaggaacatgccactacatccAT i calJac3.chr12 C 0 C 0 e canFam3.chr4 27794656 353 + 88276631 I e mm10.chr14 24234189 1789 + 124902244 I a score=3015299.000000 s hg38.chr10_KI270825v1_alt 151237 909 + 188315 AAGAATAATTTTTC-AAAAAAAAAAAGTAACCACTGCTCACTGCAATTGACCTT--CTGATGGGATTTTCACTCTGCTCCTCCCCACATCACTGTCCTGGTTAACAGAGAGTGG----TTTTTACTCGCCACAAAGTGGCTATGTGTCTTTTTTAAAAGCACAGTTCATCCCAAGAGGAAACCT----------ACAAAGGAAGCAGGTGAAGACAAGAGTACCCAGTGAAAA---------CACCATCTGCAGCCTCTGGCTCCAGCAGTGGCTCACCACCCCAGCTCAGCTCACGCAAAGCAAGGTGAGGCTTTCAGGTGGTGCTTCCCTCTCCCA-CATGGGGAGCATCTTAAACCAAAAGCAAGCAGACcagtggttttcaaactgggttct-gtgaactgtggagaaccccagggaaacctgtggaggagcctcaagaaggccacaagctcaagggacaagctccaagcccata----ctccccat-----cagtgcctctctcgtctaatttacagatctggctctcacctaagagtgcagttaacaaaaaagacctcatggctaaaaaaaaTAAAAATAAAAAACTTAAGTCATAAAAGACATTTACACTTTGTACGTGTTATTTCATTTAATTGTTTGCATCAGCCCTCTGAGGAAACCATGGCTAAACAGTTTCAGGATTG-------------------CAAGTCGCCA-----------------------------------------CCTAGAACAGTCCACTCCAGAGCTGGATAGCACCAATCATTTTTAAAAGTTCTTCCTGAAACAACCGGCCTGggcaaggggagctgccagggattataaaacagacttcagagacaa-catcaactaaatgcagtgggtggcccttgct-aaaatcctgattttaataagccaccaataaaatgacatctttgagacaagcaaaactgagcatcacccgggcaacttgataacattaagaaattatta s panTro4.chr10 76529373 909 + 133524379 AAGAATAATTTTTC-AAAAAAAAAAAGTAACCACTGCTCACTGCAATTGACCTT--CTGATGGGATTTTCACTCTGCTCCTCCCCACATCACTGTCCTGGTTAACAGAGAGTAG----TTTTTACTCGCCACAAAGTGGCTATTTGTCTTTTTTAAAAGCACAGTTCATCCCAAGAGGAAACCT----------ACAAAGGAAGCAGGTGAAGACAAGAGTACCCAGTGAAAA---------CACCATCCGCAGCCTCTGGCTCCAGCAGTGGCTCACCACCCCAGCTCAGCTCACGCAAAGCAAGGTGAGGCTTTCAGGTGGTGCTTCCCTCTCCCA-CATGGGGAGCATCTTAAACCAAAAGCAAGCAGACcagtggttttcaaactgggttct-gtgaactgtggagaaccccagggaaacctgtggaggagcctcaagaaggccacaagctcaagggacaagctccaagcccata----ctccccat-----cagtgcctctctcgtctaatttacagatctggctctcacctaagagtgcagttaacaaaaaagatctcatggctaaaaaaaaTAAAAATAAAAAACTTAAGTCATAAAAGACATTTAcactttgtacgtgttatttcatttaattgtttgcatcagccctgtgaggAAACCATGGCTAAACAGTTTCAGGATTG-------------------CAAGTCGCCA-----------------------------------------CCTAGAACAGTCCACTCCAGAGCTGGATAGCACCAATCATTTTTAAAAGTTCTTCCTGAAACAACCGGCCTGGGCAAGGGGAGCTGCCAGGGATTAtaaaacagacttcagagacaa-catcaactaaatgcggtgggtggcccttgct-aaaatcctgattttaataagccaccaataaaatgacatctttgagacaagcaaaactgagcatcacccgggcaacttgataacattaagaaattatta i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76198031 907 - 133410057 AAGAATAATTTTTC--AAAAAAAAAAGTAACCACTTCTCACTGCAATTGACCTT--CTGATGGGATTTTCACTCTGTTCCTCCCCACATCACTGTCCTGATTAACAGAGAGTGG----TTTTTACTCGCCACAAAGTGGCTATTTGTCTTTTTTAAAAGCACAGTTCATCCCAAGAGGAAACCT----------ACAAAGGAAGCAGGTGAAGACAAGAGTACCCAGTGAAAA---------CACCATCCGCAGCCTCTGGCTCTAGCGGTGGCTCACCACCCCAGCTCAGCTCACACAAAGCAAGGTGAGGCTTTCAGGTGGTGCTTCGCTCTCCCA-CATGGGGAGCATCTTAAACCGAAAGCAAGCAGACcagtggttttcaaactgcgttct-gtgaattgtggagaaccccagggaaccctgtggaggagcctcaagaaggccacaagctcaagggacaagctccaagcccata----ctccccat-----cagtgcctccctcatctattttacagatctggctttcacctaagagtccagttaacaaaaaagatctcatggct-aaaaaaaTAAAAATAAAAAACTTAGGTCATAAAAGACATTTAcactttgtatgtgttatttcatttaattgtttgcatcagccccgtgaggAAACCATGGCtaaacagtttcaggattg-------------------caagtcgcca-----------------------------------------cctagaacagtccactccagagctggatagcaccaatcatttttaaaagttcttcctGAAACAACCGGCCTGGGCAAGGGGAGCTGCCAGGGATTAtaaaacagacttcaaagacaa-catcaactaaatgcagtgggtggcccttgct-aaaatcctgattttaataagccaccaataaaatgacatctttgagacaagcaaaactgagcatcacccaggcaacttgataacattaagaaattatta i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35134380 908 + 104879549 AAGAATAATTTTTC--AAAAAAAAAAGTAACCACTTCTCACTGCAATTGACCTT--CTGATGGGATTTTCACTCTGCTCCTCCCCACATCACTGTCCTGGTTAACAGAGAGTGG----TTTTTACTCACCACAGAGTGGCTATTTGTCTTTTTTAAAAGCACAGTTCATCCCAAGAGGAAACCT----------ACAAAGGAAGCAGGTGAAGACAAGAGCACCCAGTGAAAA---------CACCATCCGCAGCCTCTGGCTCCAGTGGTGACTCACCACCCCAGCTCAGTTCATGCAAAGCAAGGTGAGGCTTTCAGATGGTGCTTCCCTCTCCCA-CATGGGGAGCATCTTAAACCAAAAGCAAGCAGACcagtggttttcaaactgcgttct-gtgaaatgtggagaaccccagggaaccccgtggaggagcctcaagaaggccacaagctcaagggacaagctccaagcctata----ctccccat-----cagtgcctctcttgtctattttacagatctggctttcacctaagagtccagttaacaaaaaagacctcatagctaaaaaaaaTAAAAATAAAAAACTTAGGTCATAAAAGACATTTACACTTTGTACGTGTTATTTCTTTTAATTGTTTGTAACAGCCCTGTGGGGAAACCATGGCTAAACAGTTTTAGGATTG-------------------CAAGTAGCCA-----------------------------------------CCTAGAACAGTCCATTCCAGAGCTGGATAGCACCAATCATTTTTAAAAGTTCTTCCTGAAACAACCGGCCTGggcaaggggagcttccagggattataaaacagacttcaaagacaa-catcaactaaatgcagtgggtggcccttgct-aaaatcctgattttaataagccaccaataaaatgacatctttgagacaaacaaaagtgagcatcacccaggcaacttggtaacattaagaaactatta i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73926207 909 - 130959383 AAGAATAATTTTTC--AAAAAAAAAAGTAACCACTTCTCACTGCAATTGACTTT--CTGATGGGATTTTCATTCTATTCCTCCCCACGTCACTGTCCAGAGTAACAGAGAGTGG----TTTTTGCTCGCCACAAAGTGGCTATTTGTCTTTTTTAAAAGCACAGTTCATCCCAAGAGGAAACTT----------ACAAAGGAAGCAGGTGAAGACAAGAGTACCCAGTGAAAA---------CACCATTAGCAGCCTCTGGCTCCAGCGGTGGCTCACCACCCCAGCTCAGCTCACACAAAGCAAGGTGAGGCTTTCAGGTGGTGCTTCCCTCTCCCA-CGTGGGGAGTATCTTAAATCAAAAGCAAGCAGACcagtggttttcaaactgtgttct-tggaactgtgaagaacccgagggaaccttgtggaggagtctcaagaaggccacaagctcaagggacaagctccaagcctatactccctccccat-----cagtgcctctctcatctattttacagatctggctttcacctaagagtccaattaacaaaaaagatctcatggctaaaaaaaaT-AAAAT-AAAAACTTaggtcataaaggacatttacactttgtacgtgctatttcatttaattgtttgcaacagccctgtgaggaaaccatggcTAAACAGTTTTAGGATTG-------------------CAAGTGGCTA-----------------------------------------CCTAGAACAGTCCATTCCAGAGCTGGATAGCACCAATCATTTTTCAAAGTTCTTCCTGAAACAACCGGCCTGGGCAAGGGGAGCAGCCAGGGATTttaaaacagacttcaaagacaa-catcaactatatgcagtgtgaggcccttgct-aaaaccctgattttaacaagccaccaataaaatga-atctttgagacaagcaaaactgagcatcacccgggcaacttgataacattaagaaattatta i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75486769 909 - 133195287 AAGAATAATTTTTC--AAAAAAAAAAGTAACCACTTCTCACTGCAATTGACTTT--CTGATGGGATTTTCATTCTATTCCTCCCCACGTCACTGTCCAGAGTAACAGAGAGTGG----TTTTTGCTCGCCACAAAGTGGCTATTTGTCTTTTTTAAAAGCACAGTTCATCCCAAGAGGAAACTT----------ACAAAGGAAGCAGGTGAAGACAAGAGTACCCAGTGAAAA---------CACCATTAGCAGCCTCTGGCTCCAGCGGTGGCTCACCACCCCAGCTCAGCTCACACAAAGCAAGGTGAGGCTTTCAGGTGGTGCTTCCCTCTCCCA-CGTGGGGAGTATCTTAAATCAAAAGCAAGCAGACcagtggttttcaaactgtgttct-tggaactgtgaagaacccgagggaaccttgtggaggagtctcaagaaggccacaagctcaagggacaagctccaagcctatactccctccccat-----cagtgcctctctcatctattttacagatctggctttcacctaagagtccaattaacaaaaaagatctcatggctaaaaaaaaT-AAAAT-AAAAACTTaggtcataaaggacatttacactttgtacgtgctatttcatttaattgtttgcaacagccctgtgaggaaaccatggcTAAACAGTTTTAGGATTG-------------------CAAGTGGCTA-----------------------------------------CCTAGAACAGTCCATTCCAGAGCTGGATAGCACCAATCATTTTTCAAAGTTCTTCCTGAAACAACCGGCCTGGGCAAGGGGAGCAGCCAGGGATTTTAAAACAGACTTCAAAGACAA-CATCAACTATATGCAGTGTGAGGCCCTTGCT-AAAACCCTGATTTTAACAAGCCACCAATAAAATGA-ATCTTTGAGACAAGCAAAACTGAGCATCACCCGGGCAACTTGATAACATTAAGAAATTATTA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73351016 910 - 125196307 Aagaataatttttc--caaaaaaaaagtaaccactTCTCACTGCAATTGACTTT--CTGATGGGATTTTCATTCTGCTCCTCCCCACGTCACTGTCCAGAGTAACAGAGAGTGG----TTTTTGCTCGCCACAAAGtggctatttgtcttttttaaaagcacagtttATCCCAAGAGGAAACTT----------ACAAAGGAAGCAGGTGAAGACAAGAGTACCCAGTGAAAA---------CACCATTGGCAGCCTCTGGCTCCAGCGGTGGCTCACCACCTCAGCTCAGCTCACACAAAGCAAGGTGAGGCTTTCAGGTGGTGCTTCCCTCTCCCA-CGTGGGGAGTATCttaaatcaaaagcaagcagaccagtggttttcaaactgtgttct-TGGAACTGTGAGGAACCCGAGGGAACCCTGTGGAGGAGCCTCAAGAAGGCCACAAGCTCAAGGGACAAGCTCCAAGCCTATACTCCCTCCCCAT-----CCGTGCCTCTCTCATCTATTTTACAGATCTGGCTTTCACCTAAGAGTCCAATTAACAAAAAAGATCTCAtggctaaaaaaaat-aaaataaaaaacttaggtCATAAAGGACATTTACACTTTGTACGTGctatttcatttaattgtttGCCACAGCCCTGTGAGGAAACCATGGCTAAACAGTTTTAGGATTG-------------------CAAGTGGCCA-----------------------------------------CCTAGAACAGTCCATTCCAGAGCTGGATAGCACCAATCATTTTTCAAAGTTCTTCCTGAAACAACCGGCCTGGGCAAGGGGAGCAGCCAGGGATTTTAAAACAGACTTCAAAGACAA-CATCAACTATATGCAGTGGGAGGCCCTTGCT-TAAACCCTGATTTTAACAAGCCACCAATAAAATGA-ATCTTTGAGACATGCAAAACTGAGCATCACCCGGGCAACTTGATAacattaagaaattatta i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72183981 912 - 125710982 AAGAATAATTTTTCAAAAAAAAAAAAGTAACCACTTCTCACTGCAATTGACTTT--CTGATAGGATTTTCACTCTGCTCCTCCCCACATCACTGTCCAGAGTAACAGAGAGTGG----TTTTGACTCACCACAAAGTGGCTATTTGTCTTTTTTAAAAGCACAGTTCATCCCAAGAGGAAACCT----------ACAAAGGAAGCAGGTGAAGACAAGAGTACCCAGTGAAAA---------CACCATTGGCAGCCTCTGGCTCCAGCGGTGGCTCACCACCTCAGCTCAGCTCACACAAAGCAAGGTGAGGCTTTCAGGTGGTGCTTCCCTCCCCCA-CGTGGGGAGTATCTTAAATCAAAAGCAAGCAGACcagtggttttcaaactgtgttctgtggaactgtgaagaacccgtgggaaccctgtggaggagcctcaagaaggccacaagctcaagggacaagctccaagcctatattccctccccat-----cagtacctctctcatctattttatagatctggctttcacctaagagtccagttaacaaaaaagatctcatggtt-aaaaaaat-aaaataaaaaacTTaggtcataaaggacatttacactttgtacgtgctatttcatttaattgtttgcaacagccctgtgaggaaaccatggcTAAACAGTTTTAGGATTA-------------------CAAGTGGCCA-----------------------------------------CCTAGAACAGTCCATTCCAGAGCTGGATAGCACCAATCATTTTTCAAAGTTCTTCCTGAAACAACTGGCCTGGGCAAGGGGAGCAGCCAGGGATTTTAAAACAGACTTCAAAGACAA-CATCAACTAAATGCAGTGGGAAGCCCTTGCT-AAAATTCTGATTTTAACAAGCCACCAATAAAATGA-ATCTTTGAGACAAGCAAAACTGAGCATCACCCGGGCAACTTGATAACATTAAGAAATTATTA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75642628 909 - 121768101 CAGAATAATTTTTCAAAAAAAAAAACATAACCACTTCTCACTGCAATTGACCTT--CTCATGGGATTTTCACTCTGCTCCTCCCCACATCACTGTCCTGGGTAAAAGAGAGTGG----TTTTTACTCACCACAATGTCACTATTTGTCATTTTTAAAAGCACAGTTCATTCCAAGAGGAAACCT----------ACAGAGGAAGCAAGTGAAGACAAGAGTACCCAGTGAAAA---------CACCATCAGCAGCCTCTGGGTCCAGCTGTGACTCGCCACACCAGCTCAACTCATGCAAAGACAGGTGAGGCTTTCAGGTGGTACTTCCCTCTCCCA-CATGGGGAGCATCTTAAATCAAACGCAACCAGATcagtggttctcaaactgtgttctgtagaactgtggagaaccccagggaaccctgtggaggagccttgagaaggccacatgctaaagaggcaagctccaagcctatt----ctcccaat-----cagtgcctctctcgtctattttacagatcttgctttcacttaagagtccagttaacaaaaaggaactcatggct--aaaaaataaaaataaaaaacTTAGGTCATAAAGGACATTTACCTTTTGCATGTGTTATTTCACTTAATTGTTTCCAACAGCCCTGAGAGGAAACCGTGGGTAAACAGTTTTAGGATTG-------------------CAACTGGCCA-----------------------------------------CCAAGAACAGTCCATCCCAGAGCTGGATAGCACCAATCATTTTTAAAAGTTCTTCCTGAAACAATAGGCCTGGGCAAGGGGAGCTGCCAGGGATTAtaaaacagacttcaaagacaa-catcaactaaatgcagtgggtggcccttgct-gaaatcctgatttgaataagcccccaataaaatgacatctttgagaaaagcaaaactgagcatcacccaggcaactggataacattaggaaattatta i calJac3.chr12 C 0 C 0 s canFam3.chr4 27795009 961 + 88276631 aagaaaAAATTTTC-----AAAAAAGGTAACCACTTCCCACTCCAAGGGCCCCCAACAGATGGGG-CTGCACTCTGCT------CACAGAACTGTCTTGGATAGCAGACAGTGGGGACTTTTTAGTGGCCACATTGTGATCATCTGTCATTTCTGAGAGCATGGGTCATCCCAAAAGGAAACCTACGAAGGTAAACAGAGGAAGCAGACAAAGACAAGAGTATCTGGTGGAGACACGGCTGTCACCGATGGCAGCCTCTATGTCCAGCTATGACTCACCAACTCAGCTCCACTGAGTCAGAGGAAGGTGAGGCTTGTGGGTGGCTCCTCTCTCTCTCAGCATGGGGAGCATCTTGAAACAAAAGCACCCGAACAagcggttttcagactgtgttcc-gtgaaccctggagagccccgcggatctctgcaggggggcctcggggaggccacgaggaaaacagatgggctccaggcctcca----cacccagtcaccacagcacctttct-gtctgcttgacacatctgcctttcatatacaagtctgctcaatgaaaagagccctacaacttaaaTCAATCAA-----------TCAATCATAGAAAACATTTACACTTCCCATGT----TTTCATTTAATTGTTTGTAACAGCTCCATGAGGAAACAGAGGCTGAAGAGGCTTATGGCTGGACTCCACAGCCCCTTCTCCGGGTAACCACCCTGTGCACACCTGTCACCTAGGTGAACTCTCGGGAAGGCCCTACAAGAGTCCACGCCATGGCTGGCTGGCACTGA---------GAAGTCCTTCCATAAGCaaaagaccaggggaagggtagctgccagggattataaaagacactcagaagggagtcatcaactaaatgcaatgtgtgagccttactaaaaatcctgatttgaacaaaccatctataaaaagtcatttctgagaa----aaCATAGAGTATCAAGTAAG-AAGGAGAAGACATGAAATAAGCATGA i canFam3.chr4 I 353 I 400 e mm10.chr14 24234189 1789 + 124902244 I a score=1309757.000000 s hg38.chr10_KI270825v1_alt 152146 435 + 188315 ttaatgcctcatctcttagagacacatctttaagtatttataagaaaaatgacatgctgcctgggatttggttGGGAGAGATGGGTGATTGTTACATTATCCTCTCTGTTCTTCCACATGTGTGAATGtctttttca-ttttttacttttttagagctggggtctggctctgtctcccaggctggagtgcagtggtacactcagagctcactgcaacctcaaactcttgggctcaaccaatcctcccgcctcagcctcccgaatagctggggatacaggcagtgtccccttgctcagctaa---tttttttttatttttgtagacatggggttttgccgtgttgcccaggctggtctcaaactcctgggctcaaggaatcctcctgtctcgacctcctaaagcgctgggattacaggtataagccaccatgcctggcTC s panTro4.chr10 76530282 435 + 133524379 ttaatgcctcatctcttagagacacatctttaagtatttataagaaaaatgacatgctgcctgggatttggttGGGAGAGATGGGTGATTGTTACATTATCCTCTCTGTTCTTCCACATGTGTGAATGTCtttttca-ttttttacttttttagagctggggtctggctctgtctcccaggctggagtgcagtggtacactcagagctcactgcaacctcaaactcttgggctcaaccaatcctcccgcctcagcctcccgaatagctggggatacaggcagggtccccttgctcagctaa---tttttttttatttttgtagacatggggttttgccgtgttgcccaggctggtctcaaactcctgggctcaaggaatcctcctgtctcgacctcctaaagcgctgggattacaggtataagccaccatgcctggcTC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76198938 437 - 133410057 ttaatgcctcatctcttagagacacatctttaagtatttataagaaaaatgacatgctgcctgggatttggttGGGAGAGATGGGTGATCGTTACATTATCCTCTCTGTTCTTCCACATGTGTGAATGTCtttttca-ttttttacttttttagagctggggtctggttctgtctcccaggctggagtgcagtggtacactcatagctcactgcaacctcaaacccttgggctcaaccaatcctcccgcctcagcctcccaaatagctggggatacaggcagtgtccccttgctcagctaa-tttttttttttatttctgtagacatggggttttgccgtgttgcccaggctggtctcaaactcctgggctcaagggatcctcctgtctcgacctcctaaagcactgggattacaggtataagccaccatgcctggctC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35135288 437 + 104879549 ttaatgcctcatctcttagagacacatctttaagtatttataagaaaaatgacatgctgcctgggatttggttGGGAGAGACAGGTGATCATTACATTATCCTCTCTGTTCTTCCACATGTGTGAATGTCtttttca-ttttttacttttttagagctggggtctggttctgtctcccaggctggagtgcagtggtacactcatagctcactgcaacctcaaactcttggactcaaccaatcctcctgcctcagcctcccgaatagctggggctacaggcagtgtccccttgctcagctaa-tttttttttttatttttgtagacatggggttttgccgtgttgaccagtctggtctcaaactcctgggctcaagggatcctcctgtcttgacctcctaaagcgccaggattacacgtataagctcccatgcccggcTC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73927116 437 - 130959383 ttaatgcctcatctcttagagacacatttttaagtatttataagaaaaatgacatgctgcctgggatttTGTTGGGAGAGATGGGTGATCATTACATTATCCTCCCTGTTCTTCCACATGTGTGAAAGCCtttttca-tttttcacttttttagagct-gggtctggttctgtctcccaggctggagcacagtggtacactcatagctcactgcaacctcaaactcttgggctcaaccaatcctcccgcctcagcctcccgaatagctggggctacaggtagtgtccctttgcccagctaatttttttttttaatttttgtagacacgtggttttgccgtgttgcccaggctggtctcgaactcctgggctcaagggatcctcctgcctcggcctcctaaagagctgggattacaggtataagccaccatgcctagcTC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75487678 436 - 133195287 TTAATGcctcatctcttagagacacatttttaagtatttataagaaaaatgacatgctgcctgggatttTGTTGGGAGAGATGGGTGATCATTACATTATCCTCCCTGTTCTTCCACATGTGTGAAAGCCtttttca-tttttcacttttttagagct-gggtctggttctgtctcccaggctggagcacagtggtacactcatagctcactgcaacctcaaactcttgggctcaaccaatcctcccgcctcagcctcccgaatagctggggctaaaggtagtgtccctttgcccagctaa-ttttttttttaatttttgtagacacgtggttttgccgtgttgcccaggctggtctcgaactcctgggctcaagggatcctcctgcctcgacctcctaaagagctgggattacaggtataagccaccatgcctagcTC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73351926 436 - 125196307 ttaataccTCATCTCTTAGAGacacatttttaagtatttacaagaaaaatgacATGCTGCCTGGGATTTTGTTGGGAGAGATGGGTGATCATTGCATTATCCTCTCTGTTCTTCTACATGTGTGAAagcctttttca-tttttcacttttttagagCT-GGGTCtggttctgtctcccaggctagagcacagcggtacactcatagctcactgcaacctcaaactcttgggctcaaccaatcctcccgcctcagcctcccgaatagctggggctacaggtagtGTCCCttagtccagctaa-ttttttttttaatttttgtagacacgtggttttgccgtgttgcccaggctggtctcgaactcctgggctcaagggatcctcctgcctcgacctcctaaagagctgggattacaggtataagccaccatgcctagctc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72184893 436 - 125710982 TTAATGcctcatctcttagagacacatttttaagtatttataagaaaaatgacatgctgcctgggatttTGTTGGGAGAGATGGGTGATGATTATATTATCCTCTCTGTTCTTCCACATGTGTGAAAGCCtttttca-tttttcgctttttcagagctggggtctggttctgtctcccaggctggagcgcagtggtacactcatagctcactgcaacctcaaactcttgggctcaaccaatcctcccgcctcagcctcccaaatagctggggctacaggtagtgtccctttgcccagctaa-tttttttttt-atttttgtagacacgtggttttgccatgttgcccaggctggtctcgaactcctgggctcaagggatcctcctgcctcgacctcctgaagagctgggattacaggtataagccaccatgcctagcTC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75643537 430 - 121768101 ttaattCCTCATCTCTTAGAGACACAGCTTTAAGTATCTGTAAGAAAAATGGCACGCTGCCTTGGATTTTGTTGGGAGAGATGGGTGATAGTTACATTATCCTCTCTGTTATTCCACATGTGTGAAAGTCtttttcatttttttatgtttttagagttggggtctggttctgtctcccaggctggagtacagtggtacactc------cactgtaccatgaaactcttagactcaagcaatcttcccacctcagcctcccgaatagctgagactacaggcagtgtacccttgcccagctaa---tttttttttatctttgtagacatggggttttgccatgttacccaggctggtcttgaactcctgggctcaagggatcctcctgtcttgacctcctaaagcactgggattacaggtgtaagccaccacgtctggcTT i calJac3.chr12 C 0 C 0 e canFam3.chr4 27795970 400 + 88276631 I e mm10.chr14 24234189 1789 + 124902244 I a score=728006.000000 s hg38.chr10_KI270825v1_alt 152581 217 + 188315 TTGAAAGTC-TTTAAT-A-GAATTTTAAAAGGAAGAAAGACAGGGAGGGagaatggttcttccttaaaatgaactcaattctacctccaag-taccttctggcaatcagaccatgttcagctttctgggatcaaagagaatcaggtcttatcacataccctgca-ccatctgaaaatgagcagcatctaagtccctctaagtatcctttcctcaaaaacaag s panTro4.chr10 76530717 217 + 133524379 TTGAAAGTC-TTTAAT-A-GAATTTTAAAAGGAAGAAAGACAGGGAGGGagaatggttcttccttaaaatgaactcaattctacctccaag-taccttctggcaatcagaccatgttcagctttctgggatcaaagagaatcaggtcttattacataccctgca-ccatctgaaaatgagcagcatctaagtccctctaagtatcctttcctcaaaaacaag i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76199375 217 - 133410057 TTGAAAGTC-TTTAAT-A-GAATTTTAAAAGGAAGAAAGACAGGGAGGGagaatggttcttccttaaaatgaactcaattctacctccaag-taccttctggcactcagaccatgttcagctttctgggatcaaagagaatcaggtcttatcacgttccctgta-ccaactgaaaacgggcagcatctaagtccctctaagtgtcctttcctcaaaaacaag i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35135725 217 + 104879549 TTGAAAGTC-TTTAAT-A-GAATTTTAAAAGGAAGAAAGACAGGGAGAGagaatggttattccttaaaatgaactcaattctacctccaag-taacttctggcaatcagcccatgttcagctttctgggatcaaagagaatcaggtcttatcacgtgccctgca-ccatctgaaaacgggtagcatctaagtccctctaagtgtcctttcctcaaaaacaag i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73927553 217 - 130959383 TTGAAAGTC-TTTAAT-A-GAATTTTAAAAGGAAGAAAGACAGGGAGGCagaatggttcttccttaaaatgaactcaattccacctccaag-taacttctggcaatcagcccatgttcagctttctgggatcaaaaagaatcaggtcttatcacatgccctgca-ccatctgaaaatgggcagcacctaagtccctctaagtctcctttcctcaaaaacaaa i rheMac3.chr9 C 0 I 316 s macFas5.chr9 75488114 217 - 133195287 TTGAAAGTC-TTTAAT-A-GAATTTTAAAAGGAAGAAAGACAGGGAGGCagaatggttcttccttaaaatgaactcaattccacctccaag-taacttctggcaatcagcccatgttcagctttctgggatcaaaaagaatcaggtcttatcacatgccctgca-ccatctgaaaatgggcagcacctaagtccctctaagtctcctttcctcaaaaacaaa i macFas5.chr9 C 0 I 316 s papAnu2.chr9 73352362 217 - 125196307 ttGAAAGTc-tttaat-a-gaattttaaaaggaagaaagacagggaGGCAGAATGGTTCTTCCTTAAAATGAACTCAATTCCACCTCCAAG-TAACTTCTGGCAATCAGCCCATGTTCAGCTTTCTGGGATCAAAAACAATCAGGTCTTATCACATGCCCTGCA-CCATCTGAAAACGGGCAGCACCTAAGTCCCTCTAAGTCTCCTTTCCTCAAAAACAAA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72185329 217 - 125710982 TTGAAAGTC-TTTAAT-A-GAATTTTAAAAGGAAGAAAGACAGGGAGGCagaatggttcttccttaaaatgaactcaattctacctccaag-taacttctggcaatcagcccatgttcagcgttctgggatcaaaaacaatcagatcttatcacatgccctgca-ccatctgaaaatgggcagcatctaagtccctctaagtctcctttcttcaaaaacaaa i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75643967 217 - 121768101 TTG-AAGTC-TTTAATAA-GAAGCTTAAAAGGAAAAAAGACAAGGAGGGAGAATGGGtcttccttaaactgaactcaattcgacctcaaag-taacttctggcaatcagcccatgtccagccttccttgatcaaaaagaatcagatcttatcacatgccttgta-ccatctgaaaatggacatcatctaagtccctctaagtctcctttcctcaaaaacaaa i calJac3.chr12 C 0 C 0 s canFam3.chr4 27796370 211 + 88276631 TTGAAAGTCGTGTGAT-ATAAAGTCTAAGAAGAAAGGAAGGAGGGAGGCa----ggtccctccttaagtcgaattcagttgtacctcccagttatctttcacctgtcagcc--tgtttagctctctggggtccaagaaaatcgggtctcatcac-tgccctgtgtccttctgaaaacagg---catccaagcccctctaagtcttcttttctacaaaataag i canFam3.chr4 I 400 C 0 e mm10.chr14 24234189 1789 + 124902244 I a score=24687.000000 s hg38.chr10_KI270825v1_alt 152798 6 + 188315 ctcttc s panTro4.chr10 76530934 6 + 133524379 ctcttc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76199592 6 - 133410057 ctcttc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35135942 6 + 104879549 ctcttc i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73928086 6 - 130959383 ctcttc i rheMac3.chr9 I 316 C 0 s macFas5.chr9 75488647 6 - 133195287 ctcttc i macFas5.chr9 I 316 C 0 s papAnu2.chr9 73352579 6 - 125196307 CTcttc i papAnu2.chr9 C 0 I 1223 s chlSab2.chr9 72185546 6 - 125710982 ctcttc i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75644184 6 - 121768101 ctcttc i calJac3.chr12 C 0 C 0 s canFam3.chr4 27796581 6 + 88276631 ctcctc i canFam3.chr4 C 0 I 2 e mm10.chr14 24234189 1789 + 124902244 I a score=281916.000000 s hg38.chr10_KI270825v1_alt 152804 114 + 188315 aaggtccttTTGGAACTGAACTC---ACAGGTCACAGcaatgccctccttaaaaatgtgggcttcaggaccaaagaattgtgaaggtgtcttt-tgagcagcccagagAAGCATGGGC s panTro4.chr10 76530940 117 + 133524379 aaggtccttttggaactgaactcctcacaggtcacagCAATGCCCTCCTTAAAAATGTGGGCTTCAGGACCAAAGAATTGTGAAGGTGTCTTT-TGAGCAGCCCAGAGAAGCATGGGC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76199598 116 - 133410057 aaggtccttttggaactgaactcctcacaggtcacagcaatgtcctcctt-aaaatgtgggcttcaggaccaaagaattgtgaaggtgtcttt-tgagcagcccagagAAGCATGGGC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35135948 117 + 104879549 aaggtccttTTGGAAATGAACTCCTCACAGGTCACAGcaatgccctccttaaaaatgtgggcttcaggaccaaagaattgtgaaggtgtgttt-tgagcagcccagagAAGCATGGGC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73928092 117 - 130959383 aaggtccttttggaactgaactcctcacaggtcacagcaatgccctccttaaaaatgtgggctccaggacaaaaggattgtgaaggtgtgttt-tgagcagcccagagAAGCATGGGC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75488653 117 - 133195287 aaggtccttttggaactgaactcctcacaggtcacagcaatgccctccttaaaaatgtgggctccaggacaaaaggattgtgaaggtgtgttt-tgagcagcccagagAAGCATGGGC i macFas5.chr9 C 0 C 0 s chlSab2.chr9 72185552 105 - 125710982 aaggtccttttggaact-aactcctcacaggtcacag-----------tCAAAAACGTGGGCTCTAGGACAAAAGGATTGTGAAGGTGTGTTT-TAAGCAGCCCAGAGAAGCATGGGC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75644190 106 - 121768101 aaggtccttTTAGAACTAAACTCCTCACAGGTCACAGCAATACCCTCCTTAAAAATGTGGGTTCCAGAACCAAAGGA-----------TGTTC-TGAGCAGCCCAGAGAAGCATGGGC i calJac3.chr12 C 0 C 0 s canFam3.chr4 27796589 101 + 88276631 gaggtccttcCTGAGCC---------------CATGACAACTCCCTCCTT-AAAATGTGGGCTACAGGACGAAAATACTGTGAAAGCGTGTTTCTGAGCAGCCCCAGGAGGCA-GGGC i canFam3.chr4 I 2 C 0 e mm10.chr14 24234189 1789 + 124902244 I e papAnu2.chr9 73352585 1223 - 125196307 I a score=2141920.000000 s hg38.chr10_KI270825v1_alt 152918 806 + 188315 CTCCTCGTC------CACTGCAGGCCTCTGCCTTGGGCATCTCCCATTTGAACTCC-AAGTATGGCCTATGCCCTGGGATGCCTCCTGATTCCATGCACAGGCTGGGAGCTTGTTCTCTACTCAGGGACAAGCTACCCCCAGTAGCTCCAGAGGCGGCAGCAGCAGCTTGCTCCTgtctcacctaaatcatctccaccctcaccaaagccctgggtgaatattattagcccctcttctacagatggggaagagaaagcaggcccaggaggttaagcgac-ttgaagtcacacagcttagga-gtaaagagctaagatttaagccccagtctgTGGGGGT-----CCCCAAGAGTGGACTCATGACATTCAGATGTCTCCAGTCCCGCAGCCTTGCTCCCTGGCTCCAAACCCACCAAGAATGCCC------CCTGGGTCATTCATCCAT--GTCCTTC----------TCCTCCCAGGAGTAACATAACACTCTGAAAGCAGAGACCACCTTCCCCACCTCCTAGCCCAGAACCTCCCAGGGGCTCAGCAAAGAGTTGCCCAAAACTTAACCAGTCCCAGACCTGCAGCCGCCAAACCACCAGGATGGCTCTCCACAAATCTTTCCAAGGCTCTCCCAGAAACCCCAACTGT---GG-CCCAAAGCCCAGTTCTCTTCACTCATTTCTAGTCTCTAG---AGCAATTCAAAGAATAATGATCACAAAACCAGGCTTCATTCTTGGCGAACTCCATAGGGGAAACAGGACCAGAGAAGACACACATCTATAAAATAATGACTACTAGCCCCAGAATCACATGTGACTATTTCAGCTGGTATCAGAA- s panTro4.chr10 76531057 806 + 133524379 CTCCTCGTC------CACTGCAGGCCTCTGCCTTGGGCATCTCCCATTTGAACTCC-AAGTATGGCCTATGCCCTGGGATGCCTCCTGATTCCATGCACAGGCTGGGAGCTTGTTCTCTACTCAGGGACAAGCTACCCCGAGTAGCTCCAGAGGCGGCAGCAGCAGCTTGCTCCTgtctcacctaaatcatctccaccctcaccaaagccctgggtgaatactattagcccctcttctacagatggggaagagaaagcaggcccaggaggttaagcgac-ttgaagtcacacagcttagga-gtaaagagccaagatttaagccccagtctgTGGGGGT-----CCCCAAGAGTGGACTCATGACATTCAGATGTCTCCAGTCCCGCAGCCTTGCTCCCTGGCTCCAAACCCACCAAGAATGCCC------CCTGGGTCATTCATCCAT--GTCCTTC----------TCCTCCCAAGAGTAACATAACACTCTGAAAGCAGAGACCACCTTCCCCACCTCCTAGCCCAGCACCTCCCAGGGGCTCAGCAAAGAGTTGCCCAAAACTTAACCAGTCCCAGACCTGCAGCCGCCAAACCACCAGGATGGCTCTCCACAAATCTTTCCAAGGCTCTCCCAGAAACCCCAACTGT---GG-CCCAAAGCCCAGTTCTCTTCACTCATTTCTAGTCTCTAG---AGCAATTCAAAGAATAATGATCACAAAACCAGGCTTCATTCTTGGCGAACTCCATAGGGGAAACAGGACCAGAGAAGACACACATCTATAAAATAATGACTACTGGCCCCAGAATCACATGTGACTATTTCAGCTGGTATCAGAA- i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76199714 803 - 133410057 CTCCTCGTC------CACTGCAGGCCTCTGCCTTGGGCACCTCCCATTTGAACTCC-AAGTATGGCCTATGCCCTGGGATGCCTCCTGATTCCATGCACAGGCTGGGAGTTTGTTCTCTACTCAGGGACAAGCTACCCCCAGTAGCTCCAGAGGCGACAGCAGCAGCTTGCTCCTCTCtcacttaaatcatctccatcctcaccaaagccctgggtgaatactattagcccctcttctacagatggggaagagaaagcaggcccaggaagttaagcgac-ttgaagtcacacagcttagga-gtaaagagccaagatttaaaccccagtctgTGGGGGT-----CCCCAAGAGTGGATTCATGACATTCAGATGTCTCTAGTCCCGCAGCCTTGCTCCCTGGCTCCAAACCCACCAAGAATGCCC------CCTGGGTCACTCATCCAT--GTCCTT-------------CTCCCAGGAGTAACATAACACTCTGAAAGCAGAGACCACCTTCCCTGCCTCCTAGCCCAGCACCTCCCAGGGGGTCAGCAAAGACTTGCCCAAAACTTAACCAGTCCCAGACCTGCAGCCGCCAAACCACCAGGATGGCTCTCCACAAATCCTTCCAAGGCTCTCCCAGAAACCCCAACTGT---GG-CCCAAAGCCCAGTTCTCTTCACTCATTTCTAGTCTCTAG---AGCAATTCAAAGACCAATGATCACAAAACCAGGCTTCATTCTTGGCGAACTCCATAGGGGAAACAGGACCAGAGAAGACACACATCTATAAAACAATGACTACTGGCCCCAGAATCACATGTGACTATTTCAGCTGGTATCAGAA- i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35136065 806 + 104879549 CTCCTCGTC------CACTGCAGGCCTCTGCCTTGGGCATCTCTCATTTGAACTCC-AAGTATGGCCTATGCCCTGGGATGCCTCCTGATTCCATGCACAGGCTGGGAGTTTGTTCTCTACTCAGGGACAAGCTACCCCCAGTAGCTCCAGAGGCGGCAGCAGCAGCTTGCTCCTgtctcacctaaatcatctccagcctcaccaaagccctgggcaaatactattagcccctcttctacagatggggaagacaaagcaggcccaggaggttaagcgac-ttgaagtcacacagcttagga-gtaaagagccaagatttaaaccccagtctgTGGGGGT-----CCCCAAGAGTGGACTCATGACCTTCAGATGTCTCTAGTCCCGCAGCCTTGCTCCCTGGCTCCAAACCCACCAAGAATGCCC------CCTGGGTCACTCATCCAT--GTCCTTC----------TCCTCCCAGGAGTAACATAACACTCTGAAAGCAGAGACCACCTTCCCCGCCTCCTAGTCCAGCACCTCCCAGGGGCTCAGCAAAGACTTGCCCAAAACTTAACCAGTCCCAGACCTGCAGCCGCCAAAACACCAGGATGGCTCTCCACAAATCCTTCCAAGACTCTCCCAGAAACCCCAACTGT---GG-CCCAAAGCCCAGTTCTCTTCACTCATTTCTAGTCTCTAG---AGCAACTCAAAGAACAATGATCACAAAACCAGACTTCATTCTTGGCGAACTCCATAGGGGAAACAGGACCAGAGAAGACACACATCTATAAAACAATGACTACTGGCCCCAGAATCACATGTGACTATTTCAGCTGGTATCAGAA- i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73928209 806 - 130959383 CTCCTCGTC------CACTACAGGCCTCTGCCGTGGGCATCTCTCACTTGAACTCC-AAGTATGGCCTATGCCCTGGGATGCCTCCTGATTCCATGCACGGGCTGTGAGTTTGTTCTCTACTCAGGGACAAGCTACCCCCAATTGCTCCAGAGGCGGCAGCAGCAGCTTGCTCCTgtctcacctaaatcatctccatcctcaccaaagccctggtagaatactattagccattcttctacagatggggaagagaaatcaggcccaggaggttaagcaac-ttaaagtcacagagcttagga-gtaaagagcaaagatttaaatcccagtctgTGGGGGT-----CCCCAAGAATAGACTCATGACATTCAGATGTCTCTAGTCCTGCAGCCTTGCTCCCTGGCTCCAAACCCACCAAGAATGCCC------CCTGGGTCACTCATCCAT--GTCCTTC----------TCCTCCCAGGAGTAACGTAACACTCTGAAAGCAGAGGTCACCTTCCCCGCCTCCCAGCCCAGCACCTTTCAGGGGCTCAGCAAAGACTTGCCCAAAACTTAACCAGTCCCAGATCTGCAGCCGCCAAAGCACCAGGATGGCTCTCCACACATCCTTCCAAGGCTCTCCCAGAAACCCCAACTGT---GG-CCCAAAGCCCAGTTCTCTTCACTCATTTCTAGTCTCTAG---AGCAACTAAAAGAACAATAAGCACAAAACCAGACTTCACTATTGGCAAACCCCATAGGGGAAACGGGACCAGAGAAGACACACATCTATAAAACAATGACTACTGGCCCCAGAATCACATGTGACTATTTCAGCTGGTATCAGAA- i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75488770 806 - 133195287 CTCCTCGTC------CACTACAGGCCTCTGCCGTGGGCATCTCTCACTTGAACTCC-AAGTATGGCCTATGCCCTGGGATGCCTCCTGATTCCATGCACGGGCTGTGAGTTTGTTCTCTACTCAGGGACAAGCTACCCCCAATTGCTCCAGAGGCGGCAGCAGCAGCTTGCTCCTgtctcacctaaatcatctccatcctcaccaaagccctggtagaatactattagccactcttctacagatggggaagagaaatcaggcccaggaggttaagcaac-ttaaagtcacagagcttagga-gtaaagagcaaagatttaaatcccagtctgTGGGGGT-----CCCCAAGAATAGACTCATGACATTCAGATGTCTCTAGTCCTGCAGCCTTGCTCCCTGGCTCCAAACCCACCAAGAATGCCC------CCTGGGTCACTCATCCAT--GTCCTTC----------TCCTCCCAGGAGTAACGTAACACTCTGAAAGCAGAGGTCACCTTCCCCGCCTCCCAGCCCAGCACCTTTCAGGGGCTCAGCAAAGACTTGCCCAAAACTTAACCAGTCCCAGATCTGCAGCCGCCAAACCACCAGGATGGCTCTCCACACATCCTTCCAAGGCTCTCCCAGAAACCCCAACTGT---GG-CCCAAAGCCCAGTTCTCTTCACTCATTTCTAGTCTCTAG---AGCAACTAAAAGAACAATAAGCACAAAACCAGACTTCACTATTGGCAAACCCCATAGGGGAAACGGGACCAGAGAAGACACACATCTATAAAACAATGACTACTGGCCCCAGAATCACATGTGACTATTTCAGCTGGTATCAGAA- i macFas5.chr9 C 0 C 0 s chlSab2.chr9 72185657 806 - 125710982 CTCCTCGTC------CACTGCAGGCCTCTGCCTTGGGCATCTCTCACTTGAACTCC-AAGTATGGCCTATGCCCTGGGATGCCTCCTGATTCCATGCACAGGCTGGGAGTTTGTTCTCTACTCAGGGACAAGCTACCCCCAATTGCTCCAGAGGCGGCAGCAGCGGCTTGCTCCTgtctcacctaaatcatctccatcctcaccaaagccctgggagaatactattagccactcttctacagatggggaagagaaatcaggtccaggaggttaagcgac-ttaaagtcacacagcttagga-gtaaagagcaaagatttaaatcccagtctgTGGGGGT-----CCCCAAGAATAGACTCATGATATTCAGATGTCTCTAGTCCTGCAGCCTTGCTCCCTGGCTCCAAATCCACCAAGAATGCCC------CCTGGGTCACTCATCCAT--GTCCTTC----------TCCTCCCAGGAGTAACATAACACTCTGAAAGCAGAGATCACCTTCCCCGCCTCCCAGCCCAGCACCTTCCAGGGGCTCAGCAAAGACTTGCCCAAAACCTAACCATTCCCAGACCTGCAGCCGCCAAACCACCAGGATGGCTCTCCACACATCCTTCCAAGGATCTCCCAGAAACCCCAACTGT---GG-CCCAAAGCCCAGTTCTCTTCACTCATTTCTAGTCTCTAG---AGCAACTCAAAAAACAATAATCACAAAACCAGACTTCATTATTGGCGAACCCCATAGGGGAAACAGGACCAGAGAAGACACACATCTATAAAACAATGACTACTGGCCCCAGAATTACATGTGACTATTTCAGCTGGTATCAGAA- i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75644296 799 - 121768101 CTCCTCGTC------CACTCCAGACCTCTGCCTTGGGCATCTCTCGCTTTAACTCCAAAGTATAGCCCATGCCCTGGGATGCTTCCTGATTCCATGCATAGGCTG-GAGTTTGCTCTCTACTCAGGGACAAGCTGCCCC-AATAGCTGCAGTGGTGGCAGCAGCAACTTGCTCCTGTCTCACCCAAatcatctccatccttaccaaagccctgggagaatactattcgcccctcttctagagatggaaaagagaaagcaggcccaggaggtttagcgac-ttgaagtcacacagcttagga-tggaagagccaagatttaaaccccagtctgAGGGGGT-----CCCCAAGAGTGGACTCATGACACTCCGATGTCTCTGATCCTGCAGCCTTGCTCCCTGGCTCCAAATCCACCACAAATGCCC------GCTATGTCACTCATCCAT--GTTACCC----------TCCTCCCAGGAGTAAC--AACACTCTGAGAGCAGAGACCACCTTCCCCACCTCCCAG-CCAGCACCTCCCAGGGGATCAGCAAAGACTTGCCCAAAACTTAACCAGTCCCAGACCTGCAGCCACCACACCACCAGGAGAGCTCTCCACGCATCCTTCCAAGGCTGTCCCAGAAACCCCAACTGT---GGCCCCAAAGCCTAGTTCTCTTCGCTCATTTCTAGTCTCTGG---AGCAACTCAAAGAACAATGATCACAAAACCAGACTTCAATCTCGGCAAACCCCATGGAGGAAAGAGGACCAGAGAAGACACACATCTGTAAAAC---GACTAC-GGCCCCAGAATCACTTGTGACTATTTCAGCTGGTGTCAGGA- i calJac3.chr12 C 0 C 0 s mm10.chr14 24235978 671 + 124902244 CTCCTCATTGGTAGACACCGCAGA-TTCGCCTCTCAGCTTCTGTCATACCAACCCC-ATTCATGGCCTGTGTCCTGTGATGCTT--TGAGTCCACATACAGTCTGAG-GCTACTGTTCCTCTTAAGGATAAGCCACTCTCAGCGAGCACAGAGGCAGCAG------------------------------------GTCTCACCAAAGCCACAG-AGAGCACTACTAATCCCTGT----CAAATGAGGAAGAGGAA----GTCATGAAGGTTAGGCTCTGCTAGAGACACAGAATTCAGGATGGAAACACTTAAGATGTAAACCTAAATTGCT--AGGC-----CTTCAAGTGTATGCTCATGGCACTCAACTGCCTCTAATCCTAGAGCCTTGCTCCCCAGCACCAATCTCACCTACAATATCCAAGACACCTGGAccatccatccatccatccatccattcattcatcctc----------catGACATTCTCAGAACAGAAACCATCTT----------------------------------------------------------------------CTGCAGCAGTCAAGCCACCAGAGCAGTCCCCTCC--ATCCTCCCGAG-CACCCTTAGAACCCCTGACTTCTAAGG-CCCAAGACCCAATCCTGCT-----GCTTTAATCCTCAAGAAAAGCACCTCAAATGTCCATGA-----------------ACTCCAGTTAAGCTCCATA---------GGCCCAGCGAGAACACAAACCTAAAATCTGACAGCTACTGGCCCCAGAACCGCATGT--CTAGTTCGACTGGCATCAGAA- i mm10.chr14 I 1789 C 0 s canFam3.chr4 27796690 681 + 88276631 CTCCTAGTC------TGCTGCA-----CAGTCTAGACAGACTCT------GACTCC-AGGTATGGCCTGGGCCCTACGATAC----TGATTCCCGGCACAGGTGGGACACTGGCTCTCCATTCAAGGGCAGG---------ACGGTTAGAAGAGCAGCAACA-------GCTCTcacctcacataagtcacctcggtcctcaccaaagcccttggaggagaatgctattcgcctttttacagat---aaggagaaagaaaagccagaagg-gaaggaag-ttgaagtcccacagcctaaga-cagaagagccaggatttaaaccccagtctgTGGAGGGGGGCATCCCAAGACTGG-TTTATGATACTCAGCAGTCTCTAGCCTTGTGGCCTCTCTCCCTGGCTCCAAACCTACCAATGACGTTCAAGCCACCTGGCTTGTTCCTCCAG--GTCAACCAGTCGACC--ACCTTCC----------TAGCACTCTGGGGGTAGAGACTATCTT-CCTGCTCCCCAGCCCAGCA---------------------------CCAACAGTTAGCCAGTCCCAGACCAGCAGTTGTCCAATCACATG------TCTCCAC----------AAGGCACCCCTGGAAACCCTAACTGG---GG-ACCAAAGCCCAGTCCTGCTCACTC------------------AG--ACCTAAAGAAGACTG---------CAAGACGCAGCAcctggctggctcagttggtggagcatg-----------------------------tgactcttggtttcagggtcatgagttcaagccccatctggggcATAGAG i canFam3.chr4 C 0 C 0 e papAnu2.chr9 73352585 1223 - 125196307 I a score=16795.000000 s hg38.chr10_KI270825v1_alt 153724 8 + 188315 TTTAAAAG-- s panTro4.chr10 76531863 8 + 133524379 TTTAAAAG-- i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76200517 8 - 133410057 TTTAAAAG-- i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35136871 8 + 104879549 TTTAAAAG-- i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73929015 8 - 130959383 TTCAAAAG-- i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75489576 8 - 133195287 TTCAAAAG-- i macFas5.chr9 C 0 C 0 s chlSab2.chr9 72186463 8 - 125710982 TTCAAAAG-- i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75645095 8 - 121768101 TTTAAAAG-- i calJac3.chr12 C 0 C 0 s canFam3.chr4 27797371 8 + 88276631 --Tagaggag i canFam3.chr4 C 0 C 0 e mm10.chr14 24236649 0 + 124902244 C e papAnu2.chr9 73352585 1223 - 125196307 I a score=216711.000000 s hg38.chr10_KI270825v1_alt 153732 126 + 188315 ACTAGGggctgggcacggtggcttgcacctgtaatcccagcactttgggaggctaaggtaggtggatcacgaggtcaggag-------------ttcaagaccagcctggccaagagagtgaaaccccatctctactaa s panTro4.chr10 76531871 126 + 133524379 ACTAGGggctgggcacggtggctcgcacctgtaatcccagcactttgggaggctaaggtaggtggatcacgaggtcaggag-------------ttcaagaccagcctggccaagaaagtgaaaccccatctctactaa i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76200525 126 - 133410057 ACTAGGggctgggcacagtggctcacacctgtaatcccagcactttgggaggctaaggtaggtggatcatgaggtcaggag-------------ttcaaggtcagcctggccaagatagtgaaaccccatctctactaa i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35136879 126 + 104879549 ACTAGGggctgggcccagtggctcacacctgtaatcccaccactttgggaggcttaggcaggtggatcacgaggtcaggag-------------ttcaagactagcctggccaagatagtgaaaccccatctctactaa i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73929023 126 - 130959383 GCTAGGggctgagcacagtgactcacacctgtaaacgcagcactttgggaggctgaagcaggtggatcacgaggtcaggag-------------ttcaagaccagcctggccaagatagtgaaaccccatttctcctaa i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75489584 126 - 133195287 GCTAGGggctgagcacagtgactcacacctgtaaacgcagcactttgggaggctgaagcaggtggatcacgaggtcaggag-------------ttcaagaccagcctggccaagatagtgaaaccccatctctcctaa i macFas5.chr9 C 0 C 0 s chlSab2.chr9 72186471 126 - 125710982 GCTAGGggctgggcacagtggctcacacctgtaaacgtggcactttgggaggctgaagcaggtggatcacgaggtcaggag-------------ttcaagaccagcctggccaagatagtgaaaccccttctctcctaa i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27797379 110 + 88276631 gggaggggaggggaggggag--------------------------gggaggggaAGAAAGAAAAAGGAGAAAACTGCGAGAGACTTAACCATCTCCAAGAACAGCCATCGCAA---AATCAGACCTCATTCTTATCAA i canFam3.chr4 C 0 I 170 e mm10.chr14 24236649 0 + 124902244 C e calJac3.chr12 75645103 0 - 121768101 C e papAnu2.chr9 73352585 1223 - 125196307 I a score=11655.000000 s hg38.chr10_KI270825v1_alt 153858 6 + 188315 aaatac s panTro4.chr10 76531997 6 + 133524379 aaatac i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76200651 6 - 133410057 aaatac i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35137005 6 + 104879549 aaatac i nomLeu3.chr18 C 0 I 14 s rheMac3.chr9 73929149 6 - 130959383 aaatac i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75489710 6 - 133195287 aaatac i macFas5.chr9 C 0 C 0 s chlSab2.chr9 72186597 6 - 125710982 aaatac i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27797489 170 + 88276631 I e mm10.chr14 24236649 0 + 124902244 C e calJac3.chr12 75645103 0 - 121768101 C e papAnu2.chr9 73352585 1223 - 125196307 I a score=75271.000000 s hg38.chr10_KI270825v1_alt 153864 58 + 188315 aaaaattagctgggcgcagtggcaggcacctgtaatcccagctacttggtaggctgag s panTro4.chr10 76532003 58 + 133524379 aaaaattagctgggcgcagtggcaggcacctgtaatcccagctacttggtaggctgag i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76200657 58 - 133410057 aaaaattagctgggcgcagtggcaggcacctgtaatcccagctactcggtaggctgag i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73929155 58 - 130959383 aaaaattagccaggtgcagtggcaggcacctgtaatcccagttacttgggaggctgag i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75489716 58 - 133195287 aaaaattagccaggtgcagtggcaggcacctgtaatcccagttactcgggaggctgag i macFas5.chr9 C 0 C 0 s chlSab2.chr9 72186603 58 - 125710982 aaaaattagccaggtgtagtggcaggcacctgtaatcccagctactcgggaggctgag i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27797489 170 + 88276631 I e mm10.chr14 24236649 0 + 124902244 C e nomLeu3.chr18 35137011 14 + 104879549 I e calJac3.chr12 75645103 0 - 121768101 C e papAnu2.chr9 73352585 1223 - 125196307 I a score=107805.000000 s hg38.chr10_KI270825v1_alt 153922 105 + 188315 gcaggagaattgcttgaacccgggggacgaaggttgcagtgaaccaagattgcaccactgcac----tccagcctgagcgacagagtgagatgccgtttc-----aaaaaaaaa s panTro4.chr10 76532061 105 + 133524379 gcaggagaattgcttgaacccgggggacgaaggttgcagtgaaccaagattgcaccactgcac----tccagcctgagcgacagagtgagatgccgtttc-----aaaaaaaaa i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76200715 114 - 133410057 gcaggagaattgcttgaaccggggggacgaaggttgcagtgcaccaagattgcaccactgcactccatccagcctgagcgacacagtgagatgccgtctcaaaaaaaaaaaaaa i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73929213 102 - 130959383 gcaggagaattgcttgaacccggggaacgaaggttgcactgaactgagattacaccactgcac----tccagcctgagcaacagagtgagatgccgtctc--------aaaaaa i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75489774 104 - 133195287 gcaggagaattgcttgaacccggggaacgaaggttgcactgaactgagattacaccactgcac----tccagcctgagcaacagagtgagatgccgtctc------aaaaaaaa i macFas5.chr9 C 0 C 0 s chlSab2.chr9 72186661 98 - 125710982 gcaggagaattgcttgaacccggggaacgaaggttgcagtgaactgagattacaccactgcgc----ttcagcctgagcaacagagtgagatgccacctc------------aa i chlSab2.chr9 C 0 C 0 s mm10.chr14 24236649 27 + 124902244 GTAAGAGAAATGTT-----------------------------------------------------TATGGCTTGGGCG---------------------------------- i mm10.chr14 C 0 C 0 e canFam3.chr4 27797489 170 + 88276631 I e nomLeu3.chr18 35137011 14 + 104879549 I e calJac3.chr12 75645103 0 - 121768101 C e papAnu2.chr9 73352585 1223 - 125196307 I a score=6912.000000 s hg38.chr10_KI270825v1_alt 154027 4 + 188315 aaaa s panTro4.chr10 76532166 4 + 133524379 aaaa i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76200829 4 - 133410057 aaaa i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73929315 4 - 130959383 aaaa i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75489878 4 - 133195287 aaaa i macFas5.chr9 C 0 C 0 s chlSab2.chr9 72186759 4 - 125710982 aaaa i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27797659 4 + 88276631 AGAA i canFam3.chr4 I 170 C 0 e mm10.chr14 24236676 0 + 124902244 C e nomLeu3.chr18 35137011 14 + 104879549 I e calJac3.chr12 75645103 0 - 121768101 C e papAnu2.chr9 73352585 1223 - 125196307 I a score=251824.000000 s hg38.chr10_KI270825v1_alt 154031 126 + 188315 aaTAGGAACGTTTAGTGTTTTGGTACTCTGAATGAGAGGGCTAGGGGAAACG-------------TAAAAAAATGATGGTATACGTTGATGCTCCAGTTTCACACATTAATGTTTTAAtttcccaaaaatgcattcctc s panTro4.chr10 76532170 126 + 133524379 aataggaaaGTTTAGTGTTTTGGTACTCTGAATGAGAGGGCTAGGGGAAACG-------------TAAAAAAATGATGGTATACGTTGATGCTCCAGTTTCACACATTAATGTTTTAAtttcccaaaaatgcattcctc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76200833 126 - 133410057 aaaaggaaaGTTTAGTGTTTGGGTACTCTGAATGAGAGGGCTAGGGGAAACA-------------TAAAAAAAAGATGGTATACGTTGATGCTCCAGTTTCATACATCAATGTCTTAATTTCCCAAAAATGCATTCCTC i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73929319 126 - 130959383 aaaaggaaaGTTTAGGGTTTTGGTGCTCTGAATGAGAGGGCTAGGGGAAATG-------------TAAAAAAATGATGGTATATGTTGATGTTCCAGTTTCATACATTAATGTTTTAAtttcccaaaaatgtattcctc i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75489882 126 - 133195287 aaaaggaaaGTTTAGGGTTTTGGTGCTCTGAATGAGAGGGCTAGGGGAAACG-------------TAAAAAAATGATGGTATATGTTGATGTTCCAGTTTCATACATTAATGTTTTAAtttcccaaaaatgtattcctc i macFas5.chr9 C 0 C 0 s chlSab2.chr9 72186763 126 - 125710982 aaaaggaaaGTTTAGGGTTTTGGTACTCTGAATGAGAGGGCTAGGGGAAACG-------------TAAAAAAATGATGGTATATGTTGATGTTCCAGTTTCATACATTAATGTTTTAAtttcccaaaaatgcattcctc i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75645103 126 - 121768101 AATAGGAACGTTTACTGTTCTGGTGCTCTGAATGGGAGAGCTAGAGGAAACA-------------TAAAAAAATTATGGTATACGTTGATGTTCCAGTTCCGTACATTAACATCTTAAtttccaaaaaacgcattcctc i calJac3.chr12 C 0 I 285 s mm10.chr14 24236676 62 + 124902244 -------------------------CTCCAAATGAGAGGACTAGGGGACATG-------------AAATAA----GTGATACGTGCTG-TGTCCCAGGACCACGT---------------------------------- i mm10.chr14 C 0 C 0 s canFam3.chr4 27797663 138 + 88276631 GATGGGAAAGGTCAGGG-TCTGGTACCCCGAGAGAAAGAGCGAGAGCAAGCGCTGGGAGAAAGTCTGAAGAAACGATGGTATACGTTGATGCTCCAGTTGCATGCACTGATGTTAAAgtttcccgaaagtgcacttctc i canFam3.chr4 C 0 C 0 e nomLeu3.chr18 35137011 14 + 104879549 I e papAnu2.chr9 73352585 1223 - 125196307 I a score=1199970.000000 s hg38.chr10_KI270825v1_alt 154157 492 + 188315 agaacactgatgtcgcaagatgctccatgataaaggactctgtggttaaatcagtttgggaaacactgcctaataaagccactctagtgaagccccaaagcacactgg---ctt---agccctctcaaggggcctgcagaaaagaacct---------------agcactgcctggatgcatttgaccacagaacccttttagggc-atagcaacactaa----catcccagcaaactagcagttagaagatgtttctt-tgggaaatgctgATCTAGGCCTTTTGAAAGAAAGTCTCAATAGCCTTGTTATCCCGGATTTGAGACTGAAAAACCAAACCAATCCTAAACGGGATAAGGAGGAAGTATCCAAAGAGCAAAAATAACGAACATGCTTCAAGGCCTTTAGGGATGAAGATGTAAGTACTGAAAACACAAAGAAAATGTGTGAACATTCCTTGGCTGCCAGATATGAATGCCACTAGGATTGTTTGGTTAATGTCTGGCCTCCAAAGAGTCA s panTro4.chr10 76532296 492 + 133524379 agaacactgatgtcgcaagatgctccatgataaaggactctgtggttaaatcagtttgggaaacactgcctaataaagccactctagtgaagccccaaagcacactgg---ctt---agccctctcaagtggcctgcagaaaagaacct---------------agcactgcctggatgcatttgaccacagaacccttttagggc-atagcaacactaa----catcccagcaaactagcagttagaagatgtttctt-tgggaaatgctgATCTAGGCCTTTTGAAAGAAAGTCTCAATAGCCTTGTTATCCCGGATTTGAGACTGAAAAACCAAACCAATCCTAAATGGGATAAGGAGGAAGTATCCAAAGAGCAAAAATAACGAACATACTTCAAGGCCTTTAGGGATGAAGATGTAAGTACTGAAAACACAAAGAAAATGTGTGAACATTCCTTGGCTGCCAGATATGAATGCCACTAGGATTGTTTGGTTAATGTCTGGCCTCCAAAGAGTCA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76200959 492 - 133410057 AGAACACTGATGTCGCAAGATGCTCCATGATAAAGGACtctgtggttaaatcagtttgggaaacactgcctaataaagccactctagtaaagccccaaagcacactgg---ctt---agccctctcaaggggcctgcagaaaagaaCCT---------------AACACTGCCTGGATGCATTTGACCGCAGAACCCTTTTAGGGC-ATAGCAACACTAA----CATCCCAGCAAACTAGCAGTTAGAAGATGTTTCTT-TGGGAAATGCTGATCTAGGCCTTTTGAAAGAAAGTCTCAATAGCCTTGTTATCCCGGATTTGAGACTGAAAAACCAAACCAATCCTAAACGGGATAAGGAGGAAGTATCCAAAGAGCAAAAATAACGAACATACTTCAAGGCCTTTAGGGATGAAGATATAAGTACTGAAAACACAAAGAAAATGTGTGAACATTCCTTGGCTGCCAGATATGAATGCCACTAGGATTGTTTGGTTAATGTCTGGCCTCCAAAGAGTCA i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73929445 492 - 130959383 agaacactgatgtcacaagatgctccgtgataaaggactctgtggttaaatcagtttgggaaacactgcctaataaagccactctagtagagccccaaagcgcactgg---ctt---agccctctcaaggggcctgcagaaaagaacct---------------agcactgcctggatgcatttgaccacagaacccttttagggc-atagcagcaccaa----catcccagcaaactagcagttagaagatgtttctt-tgggaaatgctgATCTAGGCCTTTTGAAAGAAAGTCTCAATAGCCTTGTTATCCCGGATTTGAGACTGAAAAACCAAACCAATTCTGAACGGGATAAGGAGGAAGTATCCACAGAGCAGAAATAACGAACATACTTCAAGGCCTTTAGGGATGAAGATGTAAGTACTGAAAACACAAAGAAAATGTGTGAACATTCCTTGGCTGCCAGATATGAATACCACTAGGATTGTTTGGTTAACGTCTGGCCTTCAAAGAGTCA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75490008 492 - 133195287 agaacactgatgtcacaagatgctccgtgataaaggactctgtggttaaatcagtttgggaaacactgcctaataaagccactctagtagagccccaaagcacactgg---ctt---agccctctcaaggggcctgcagaaaagaacct---------------agcactgcctggatgcatttgaccacagaacccttttagggc-atagcagcaccaa----catcccagcaaactagcagttagaagatgtttctt-tgggaaatgctgATCTAGGCCTTTTGAAAGAAAGTCTCAATAGCCTTGTTATCCCGGATTTGAGACTGAAAAACCAAACCAATTCTGAACGGGATAAGGAGGAAGTATCCACAGAGCAGAAATAACGAACATACTTCAAGGCCTTTAGGGATGAAGATGTAAGTACTGAAAACACAAAGAAAATGTGTGAACATTCCTTGGCTGCCAGATATGAATACCACTAGGATTGTTTGGTTAACGTCTGGCCTTCAAAGAGTCA i macFas5.chr9 C 0 C 0 s chlSab2.chr9 72186889 492 - 125710982 agaacactgatgtcacaagatgctccatgataaaggactctgtggttaaatcagtttgggaaacactgcctaataaagccactctagtagagccccaaagcacagggg---ctt---agccctctcaaggggcctgcagaaaagaacct---------------agcactgcctggatgcatttgaccacagaacccttttaggcc-acagcagcaccaa----catcctagcaaactagcagttagaagatgtttctt-tgggaaatgctgATCTAGGCCTTTTGAAAGAAAGTCTCAATAGCCTTGTTATCCCGGATTTGAGACTGAAAAACCAAACCAATTCTGAACGGGATAAGGAGGAAGTATCCACAGAGCAGAAATAACGAACATACTTCAAGGCCTTTAGGGATGAAGATGTAAGTACTGAAAACACAAAGAAAATGTGTGAACATTCCTTGGCTGCCAGATATGAATACCACTAGGATTGTTTGGTTAACGTCTGGCCTTCAAAGAGTCA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75645514 486 - 121768101 aaaacactgatgttgcaagatgttccatgagaaaggactctgtggtcaaatcggtttgggaaacactgcctaataaagtcactccagtgaagtcccaaagcacactgg---ctt---agccctctcaaggggcctgcagaaaagatcct---------------agcactgcctggatgcatttgaccacagaacccttttagggc-atagcaacactaa----catcccagcaaactaCCAGTT---AGATGTTTCTC-TGAGAAATGCTGATCTAGGCCTTTTGAAAGAAAGTCCTGACAGCCTTCTTATCCCGGATTTGAGACTGAAAAACCAAACCAACCCTGCATGAGATAGGAAGAAAGTATCTACAGAGCAGCAATAACGAACATACTTCAAGGCCTGTAGGGATGAAGACAGAAGTACTG-AAACACAAAGAGAACATGTGAACATTCCTTGGCTGCCAGATATGAATGCTACTGGGATTGTGTGGTTAACGTCTGGCCTCC--AGAGTCA i calJac3.chr12 I 285 C 0 s mm10.chr14 24236738 465 + 124902244 -GAACATGGATGCTTTAAGATGTCCCAAAGAAAAGGACTTTGTGGTCAAATCAGTCT---------------CTGAAGCCATTCTAGCAAAGCCCCAAAGCGCACTGG---CCCACAATTGTTCTCAAG-AGCCTAATGATAAGAAGTTAGGCCTGCTCAAAGCAGCACTACCTGCATGCACTGGACCACAGAGCTGGGCCAAGGCAAAAACAGCATCCATGTGCATCCCATCAGGCCAGTGCTCAGAACATGTTTCCTGGGGGAAATGCTGACCCAGGCCTTTTGAAAGGACATCTTGATAGAGCTGGTACCCTGGATGCGAAA-TGAGAAAGCGAACCAAGCCTGAGTGG---------------TCTGTGAAGCAGAAATGCCGAGCATACTTCAAGGCCTTT-GGGGTGAAGCTGTTAGCACTGCAAAGGAGTGGAAAA----------------GACTGCCTGGTCTGAATTCTGCTGTGATGGGATGGTTAAGGTCT-GCCTCAAAGGAGGCA i mm10.chr14 C 0 I 678 s canFam3.chr4 27797801 501 + 88276631 agaactctgatgtcgcaagatgctcaatgaaaaaagatattgtggtcaaatccatttgggaaacgctgcctggtgcacccactccagtgaaatcccgaagcacactggggtatt---agggctctcaagaggctcccagtaaataagtc----ctgttcaaaccagcactgttcagatgc-tttgaccacagaacccttttgtcaa-gctacgccactaa----catcccaccggaccagtgatgagaagatgtttcct-tgggaaatgctgACCTAGGCCTTCTGAAAGAAAATCTTGATAGCC--ATTACCCTGGATCCAAGACTGAAAAACAAAACCAACCCAGAATGGGAAAAGGAGGAAGTGTGTACAGAGCAGAAATAACTAACATACTTCAGGGCCTTTGGGGATGGAGATATTAGTATTGGAAACAAGATGGAAATGTGTGAACACCCCTCGATGGCCAGATATGAACACTGCTGGGATTGTACAGTTAACTTTGGTCCTC--AAGCGTCC i canFam3.chr4 C 0 C 0 e nomLeu3.chr18 35137011 14 + 104879549 I e papAnu2.chr9 73352585 1223 - 125196307 I a score=9394.000000 s hg38.chr10_KI270825v1_alt 154649 5 + 188315 CATGT s panTro4.chr10 76532788 5 + 133524379 CATGT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76201451 5 - 133410057 CATGT i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73929937 5 - 130959383 CATGT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75490500 5 - 133195287 CATGT i macFas5.chr9 C 0 C 0 s chlSab2.chr9 72187381 5 - 125710982 CATGT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75646000 5 - 121768101 CATAA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27798302 5 + 88276631 CAGGT i canFam3.chr4 C 0 I 81 e mm10.chr14 24237203 678 + 124902244 I e nomLeu3.chr18 35137011 14 + 104879549 I e papAnu2.chr9 73352585 1223 - 125196307 I a score=76978.000000 s hg38.chr10_KI270825v1_alt 154654 47 + 188315 AGGACAGGTGTGGTGGCTTAT-TCAATAATggattgtttgaggccagg s panTro4.chr10 76532793 47 + 133524379 AGGATGGGTGTGGTGGCTTAT-TCAATAATggattgtttgaggccagg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76201456 47 - 133410057 AGGACGGGTGTGGTGGCTCAT-TCAATAATggattgtttgaggccagg i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73929942 48 - 130959383 AGGATGGGTGCGGTAGCTCATGTCAATAATggattgtttgaggccagg i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75490505 48 - 133195287 AGGATGGGTGCGGTAGCTCATGTCAATAATggattgtttgaggccagg i macFas5.chr9 C 0 C 0 s chlSab2.chr9 72187386 48 - 125710982 AGGACGGGTGCGGTAGCTCATGTCAATAATggattgtttgaggccagg i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75646005 48 - 121768101 Aggacgggcgtggtagctcatgcctataatggatagcttgaggacagg i calJac3.chr12 C 0 C 0 e canFam3.chr4 27798307 81 + 88276631 I e mm10.chr14 24237203 678 + 124902244 I e nomLeu3.chr18 35137011 14 + 104879549 I e papAnu2.chr9 73352585 1223 - 125196307 I a score=133027.000000 s hg38.chr10_KI270825v1_alt 154701 69 + 188315 agttcgagaccagcctgggcaatatagtgagaccttgtctctactaaaaa-taaaaaaaaaattagctgg s panTro4.chr10 76532840 69 + 133524379 agttcgagaccagcctgggcaatatagtgagaccttgtctctactaaaaa-taaaaaaaaaattagctgg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76201503 70 - 133410057 agttcaagaccagcctgggcaatataatgagaccttgtctctactaaaaattaaaaaaaaaattagctgg i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35137025 58 + 104879549 agttcaagaccagcctggccaagatagtgaaaccccatctctactaaaaa------------ttagctgg i nomLeu3.chr18 I 14 C 0 s rheMac3.chr9 73929990 68 - 130959383 agttcgagaccagcctgggcaatatagtgagaccttgtctctactaaaaa-t-aaaaagaaattagctgg i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75490553 68 - 133195287 agttcgagaccagcctgggcaatatagtgagaccttgtctctactaaaaa-t-aaaaagaaattagctgg i macFas5.chr9 C 0 C 0 s chlSab2.chr9 72187434 69 - 125710982 agttcgagaccagcctgggcaatatagtgagcccttgtctctactaaaaa-taaaaaaaaaattagctgg i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75646053 57 - 121768101 agttcgagtccagcctgggcaat----------cttgtctctactaaaaa-t--caaaaaaattagctgg i calJac3.chr12 C 0 C 0 e canFam3.chr4 27798307 81 + 88276631 I e mm10.chr14 24237203 678 + 124902244 I e papAnu2.chr9 73352585 1223 - 125196307 I a score=754235.000000 s hg38.chr10_KI270825v1_alt 154770 255 + 188315 gcatggtggcacacgcctgtagtaccaactactcaggaggctgaggcaggaggattgcttgagcccaggaggttgaggccacagtaagccatgatcatgccactgcact-cagcccaaacaacagagcaagaccctgtctcaaaaaagaaaagaGTCACAGATAACTACTGAACTGTCCTAAGACTTTCCAAACCATATCTGAAGGAAGAAAAAAAA--------------tttttttttttgtaagacagagtttcgctcttgttgccc s panTro4.chr10 76532909 255 + 133524379 gcatggtggcacatgcctgtagtaccaactactcaggaggctgaggcaggaggattgcttgagcccaggaggttgaggccacagtaagccatgatcacgccactgcact-cagcccaaacaacagagcaagaccctgtctcaaaaaagaaaaGAGTCACAGATAACTACTGAACTGTCCTAAGACTTTCCAAACCATATCTGAAGGAAGAAAAAAAA--------------tttttttttttgtaagacagagtttcgctcttgttgccc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76201573 257 - 133410057 gcatggtggcacatgcctgtagtaccaactattcaggaggctgaggcaggaggattgcttgagcccaggaggttgaggccgcagtaagccatgatcatgccactgca-t-cagcccaaacaacagagcaagaccctgtctcaaaaaagaaaaGAGTCACAGATAACTACTGAACTGTCCTAAGACTTTCCAAACCATATCTGAAGGAAGAAAAAAAA-----------AAttttttttttttgtgagacagagtttcactcttgttgccc i ponAbe2.chr10 C 0 I 136 s nomLeu3.chr18 35137083 269 + 104879549 gcgcagtggcaggcacctgtaatcccagctactcaggaagctgaggcaggaggattgcttgagcccaggagattgaggctgcagtaagccataatcatgccactgcact-cagcccaaacaacagagcaagaccctgtctcaaaaaagaaaagaGTCACAGATAACTACTGAACTGTCCTAAGACTTTCCAAACCATATCTGAAGAAAGAAAAAAAttttttttttttttttttttttttttgggagacagagtttcgctcttgttgccc i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73930058 256 - 130959383 gcatggtggcacatgcctgtagtaccaactactcaggaggctgaggtaggaggattgcttgagcccaggaggttgaggctgcagtaagccatgatcacgccactgcact-cagcccaaacaacaaagcaagaccctgtctcaaaaaGTAAGAGAGTCACAGATAACTACTGAACTGTCCTAAGACTTTCCAAACCATATCTGAAGGAAGAAAAAAAA-----------Atttttttttttttgtgag--agagtttcgctcttgctgccc i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75490621 256 - 133195287 gcatggtggcacatgcctgtagtaccaactactcaggaggctgaggtaggaggattgcttgagcccaggaggttgaggctgcagtaagccatgatcacgccactgcact-cagcccaaacaacaaagcaagaccctgtctcaaaaaGTAAGAGAGTCACAGATAACTACTGAACTGTCCTAAGACTTTCCAAACCATATCTGAAGGAAGAAAAAAAA-----------Atttttttttttttgtgag--agagtttcgctcttgctgccc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73353808 255 - 125196307 gcatggtggcacatgcctgtagtaccaactactcaggaggctgaggtaggaggattgcttgagcccaggaggttgaggctgcagtaagccatgatcacaccactgcact-cagcccaaacaacaaagcaagaccctgtctcaaaaagtaagaGAGTCACAGATAACTACTGAACTGTCCTAAGACTTTCCAAACCAtatctgaaggaagaaaaaaaa-----------a-ttttttttttttgtgag--agagtttcgctcttgctgccc i papAnu2.chr9 I 1223 C 0 s chlSab2.chr9 72187503 256 - 125710982 gcatggtggcacatgcctgtagtaccaactactcaggagcctgaggcaggaggattgcttgagcccaggaggttgaggctacagtaagccatgatcacgccaccgcact-cagcccaaacaacaaagcaagaccctgtctcaaaaaGTAAGAGAGTCACAGATAACTAGTGAACTGTCCTAAGACTTTCCAAACCATATCTGAAGGAAGAAAAAAAA-----------Atttttttttttttgtgag--agagtttcgctcttgctgccc i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75646110 251 - 121768101 gaatggtggcacaggcctgtagtaccaactactaaggaggctgaggcaggaggactgcttgagcccaggaggttgaggctgcagtaagccatgatcatgccactgcactccagcctagacaatagagcaagaccctgtgtcaaaaa-----agaGTCACAGATAACTACTAAATTGTCCTAAGACTTTCCAAACCGTATCTGAAGGAAGAAAAAATA-----------ACttttttttttt---gagacagagtttcactctcattgctc i calJac3.chr12 C 0 C 0 e canFam3.chr4 27798307 81 + 88276631 I e mm10.chr14 24237203 678 + 124902244 I a score=183927.000000 s hg38.chr10_KI270825v1_alt 155025 81 + 188315 aggctggagtgaaatggcacgatctcagctaactgcagcctctgcctcatgggttcaagcacttctcctgcctcagcctcc s panTro4.chr10 76533164 81 + 133524379 aggctggagtgaaatggcacgatctcagctaactgcagcctctgcctcatgggttcaagcacttctcctgcctcagcctcc i panTro4.chr10 C 0 C 0 s nomLeu3.chr18 35137352 81 + 104879549 aggctggagtgcaatggcacgatctcagctaaccgcagcctctgcctcatgggttcaagcaattctcctgcctcagcctcc i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73930314 81 - 130959383 aggctagagtgcaatggcacaatctcagctaactgcagcctctgcctcatggattcaagcaattctcctgcctcagcctcc i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75490877 81 - 133195287 aggctagagtgcaatggcacaatctcagctaactgcagcctctgcctcatggattcaagcaattctcctgcctcagcctcc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73354063 81 - 125196307 aggctagagtgcaatggcgcaatctcagctaactgcagcctctgcctcatggattcaagcaattctcctgcctcagcctcc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72187759 81 - 125710982 aggctagagtgcaatggcgcaatctcagctaactgcagcctctgcctcatggattcaagcaattctcctgcctcagcctcc i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75646361 79 - 121768101 aggctggagcgcagtggcgcagtgtcagctcactgcagcctctgcctcccaggtttaag--attctgttgcctccatctcc i calJac3.chr12 C 0 C 0 e canFam3.chr4 27798307 81 + 88276631 I e mm10.chr14 24237203 678 + 124902244 I e ponAbe2.chr10 76201830 136 - 133410057 I a score=527516.000000 s hg38.chr10_KI270825v1_alt 155106 181 + 188315 caagtagctgggattacaggcacacaaccaccacgcccggctaaatttttgtatttttagtagagatggggtttcatcatgttggcca-gctagtctcgaactcctagcctcagatgatccacccgcctcagcctcccaaaatgctgggattacaggcatgagccaccacgcccggccAAAA s panTro4.chr10 76533245 181 + 133524379 caagtagctgggattacaggcacagaaccaccacgcccggctaaatttttgtatttttagtagagatggggtttcatcatgttggcca-gctagtctcgaactcctggcctcagatgatccacccgcctcagcctcccaaagtgctgggattacaggcatgagccaccacacccggccAAAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76201966 182 - 133410057 caagtagctgggattacaggcacacaaccaccatgcccggctaaatttttgtatttttagtagagatggggtctcatcatgttggccaggctagtcttgaactcctggcctcagatgatccacccgcctcagcctcccaaagtgttgggattacaggcatcagccaccacgcctggccAAAA i ponAbe2.chr10 I 136 C 0 s nomLeu3.chr18 35137433 181 + 104879549 caagtagctgggattacaggcacac-accaccatgcccggctaattttttgtatttttagtaaagatgggatttcatcatgttagccaggctagtctcgaactcctggcctcaggtgatccacccacctcagcctcccaaagtgctgggattacaggcatgagccaccacgcctggccAAAA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73930395 180 - 130959383 caagtagctgggattgcaggcacac-accaccacacccagct-attttttgtatttttagtagagatggggtttcatcatgttggccaggctggtctcaaactcctggcctcaggtgatccacccgcctcggcctcccaaagtgctgggattacagacatgagccactgcgcctggtcAAAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75490958 180 - 133195287 caagtagctgggattgcaggcacac-accaccacacccagct-attttttgtatttttagtagagatggggtttcatcatgttggccaggctggtctcaaactcctggcctcaggtgatccacccgcctcggcctcccaaagtgctgggattacagacatgagccactgcgcctggtcAAAA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73354144 180 - 125196307 caagtagctgggattacaggcacac-accaccacacccagct-attttttgtatttttagtagagatggggtttcgtcatgttggccaggctggtctcaaactcctggcctcaggtgatccacccgcctcggcctcccaaagtgctgggattacaggcatgagccaccgcgcctggtcaaaa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72187840 180 - 125710982 caagtagctgggattacaggcacac-accaccacacccagcc-attttttgtatttttagtagagatggggtttcgtcatgttggccaggctggtctcaaactcccggcctcaggtgatccacccgcctcggcctcccaaagtgctgggattacaggcatgagccaccgcgcctggtcAAAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75646440 181 - 121768101 caagtagctgggattacaggcatgg-accaccacacctggctaattttttgtatttttagtagagttggggtttcgtcatgttgaccaggctggtcttgaactcctggcctcaggtgatccacctgtctcggcctcccaaacctatgggattacaggcgtgagccactgcacccagccAAAA i calJac3.chr12 C 0 C 0 e canFam3.chr4 27798307 81 + 88276631 I e mm10.chr14 24237203 678 + 124902244 I a score=338653.000000 s hg38.chr10_KI270825v1_alt 155287 107 + 188315 ACAATTTTTAGAAGA-----------------------------------------------------------AAAAAAGGAAAGAAAAT-----------------------GCTATCCACCCCCATGTCAGGGTGCTGTGAACAGTATGGATTTCCTTAATTAAAACTCAGAGTaaac--agtatggt s panTro4.chr10 76533426 107 + 133524379 ACAATTTTTAGAAGA-----------------------------------------------------------AAAAAAGGAAAGAAAAT-----------------------GCTATCCACCCCCATGTCAGGGTGCTGTGAACAGTATGGATTTCCTTAATTAAAACTCAGAGTaaac--agtatggt i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76202148 106 - 133410057 ATAATTTTTAGAAGA-----------------------------------------------------------AAAAAAGGAAAGAAAAT-----------------------GCTATCCACTCCCATGTCAGGGTGCTGTGAACAGTATGGATTTCCTTAATTAAAACTCAg-gtaaac--agtatggt i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35137614 106 + 104879549 ACAATTTTTAGAAGA-----------------------------------------------------------AAAAAC-GAAAGAAAAT-----------------------GCTATCCACCCCCATGTCAGGGTGCTGTGAACAGTATGGATTTCCTTAATTAAAACTCAGAGTaaac--agtatggt i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73930575 107 - 130959383 ACAATTTTCAGAAGA-----------------------------------------------------------AAAAAAGGAAAGAAAAT-----------------------GCTATCCACCCCCATGTCAGGGTGCTGTGAACAGTGTGGATTTTCTTAATTAAAACTCAAAGTaagc--agtatggt i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75491138 107 - 133195287 ACAATTTTCAGAAGA-----------------------------------------------------------AAAAAAGGAAAGAAAAT-----------------------GCTATCCACCCCCATGTCAGGGTGCTGTGAACAGTGTGGATTTTCTTAATTAAAACTCAAAGTaagc--agtatggt i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73354324 107 - 125196307 acaattttcagaaga-----------------------------------------------------------aaaaaaggaaagaaaat-----------------------gctatCCACCCCCATGTCAGGGTGCTGTGAACAGTGTGgattttcttaattaaaactcAAAGTAAGC--AGTATGGT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72188020 107 - 125710982 ACAATTTTCAGAAGA-----------------------------------------------------------AAAAAAGGAAAGAAAAT-----------------------GCTATCCACCCCCAGGTCAGGGTGCTATGAACAGCGTGGATTTTCTTAATTAAAACTCAAAGTaagc--agtatggt i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75646621 168 - 121768101 ATAATTTTTAGAAGAATAAAGAATGTTGTAGCAACAGaaaaaaaaaagaaaaataataaataaataaataacagaaaaaagaaaagaaaaT-----------------------GCTACCCACCCCCATGTCAGGGTGCTATGAACAGTACAGATTTCCTTAATTAAAACTCAAAGTAggccaggcatggt i calJac3.chr12 C 0 I 567 s canFam3.chr4 27798388 127 + 88276631 ACAGGTGTTAGAAG------------------------------------------------------------AAAAAAGGAAAGAAAATGTTGGAATCAGGACTCCAGCCAGGCCATTCACCCTTGAGTCAAGATGCTGTGGATAGTATGGATTT-CATAATTAAAACTCAA-GCACAC--CACatgat i canFam3.chr4 I 81 C 0 e mm10.chr14 24237203 678 + 124902244 I a score=990380.000000 s hg38.chr10_KI270825v1_alt 155394 384 + 188315 accttctcaaaaaattgaacacagaattaccatatgacccagcaagttcacttctgggtataa-acccaaaagaagagaaagcagggactcgaagagatatttgtacacccatggtgtcatagcagcattattcacaatggctaaaaggtgaaaacaacccaaatgtgtccatcaacaggtaaagaaacaaataaaatatagaatat-atatatatatatatatatgaatattattcggcctaaaaaagg-----aattttgacatatactaaaatatggatgaaccttgaggactttatgcttagagaagtaagccagtcacaaaaagacaaatctgtattgacttcacttataaaagatacctaaagtagtcaaattcct-agaaacgga s panTro4.chr10 76533533 382 + 133524379 accttctcaaaaaattgaacacagaattaccatatgacccagcaagttcacttctgggtataa-acccaaaagaagagaaagcagggactcgaagagatatttgtacacccatggtgtcatagcagcattattcacaatggctaaaaggtgaaaacaacccaaatgtgtccatcaacaggtaaagaaacaaataaaatatagaatat-atatatatatatatat--gaatattattcggcctaaaaaagg-----aattttgacatatactaaaatatggatgaaccttgaggactttatgcttagagaagtaagccagtcacaaaaagacaaatctgtattgacttcacttataaaaggtaactaaagtagtcaaattcct-agaaaccga i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76202254 372 - 133410057 actttctcaaaaaattgaacacagaattaccatatgacccagcaagttcacttctgggtataa-acccaaaagaagagaaagcagggcctcgaagagatatttgtacacccatggtgtcacagcagcattattctcaatggccaaaaggtgaaaacaacccaagtgtgtccatcaacaggtaaagaaacaaataaaatatagaatat-atatatatag--------gaatattattcggcctaaaaaagg-----aattttgacacatactaaaacatggatgaaccttgaggactttatgcttagag----aagccagtcacaaaaagacaaatctgtattgacttcacttataaaagatacctaaagtagtcaaattctt-agaaacaaa i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35137720 374 + 104879549 accttctcaaaaaattgaacacagaattaccatatgacccagcaagttcacttctgggtataa-acccaaaagaagagaaagcagggactcgaagagatatttgtacagccatggtgtcatagcagcattattcacaatggccaaaaggtgaaaacaacccaagtgtgtccatcaacaggtaaagaaacaaataaaatatagaatat-atatatag----------gaatattatttggcctaaaaaagg-----aattttgacacatactaaaatatggatgaaccttgatgactttatgcttagagaggtaagccagtcacaaaaagacaaatctgtattgacttcacttataaaagatatctaaagtagtcaaattctt-agaaacaga i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73930682 374 - 130959383 accttctcaaaaaattgaacatagaattaccatatgacccagcaagttcacttctgggtataa-acccaa---aagagaaagcaggaactcaaagagatatttgtacacccatggtgtcatagcagcattattcacaatggccaaaagatgaagacaactcaagtatatccatcaacaggtaaagaaagaaataaaatatagaatataaaatatatag--------gaatattatttggcctaaaaaacg-----aattttgacacatactacaacatggatgaaccttgaggactttatgcttagagaagtaagccagtcacaaaaagacaaatctgtattgacttcactcataaaagatatctaaagtagtcaaattctt-agaaacaga i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75491245 374 - 133195287 accttctcaaaaaattgaacatagaattaccatatgacccagcaagttcacttctgggtataa-acccaa---aagagaaagcaggaactcaaagagatatttgtacacccatggtgtcatagcagcattattcacaatggccaaaagatgaagacaactcaagtatatccatcaacaggtaaagaaagaaataaaatatagaatataatatatatag--------gaatattatttggcctaataaagg-----aattttgacacatactacaacatggatgaaccttgaggactttatgcttagagaagtaagccagtcacaaaaagacaaatctgtattgacttcactcataaaagatatctaaagtagtcaaattctt-agaaacaga i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73354431 373 - 125196307 ACCTTCTCAAAAAATtgaacatagaattaccatatgacccagcaagttcacttctgggtataa-acccaa---aagagaaagcaggaactcaaagagatatttgtacacccatggtgtcatagcagcattattcacaatggccaaaaggTGAAGACAACTCAAGTATATCCATCAAcaggtaaagaaagaaataaaatatagaatat-atatatatag--------gaatattatttggcctaaaaaagg-----aattttgacacatactacaacatggatgaaccttgaggacttTATGCTTAGAGAAGtaagccagtcataaaaagacaaatctgTATTGACTTCACTCATAAAagatatctaaagtagtcaaattctt-agaaacaga i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72188127 368 - 125710982 accttctcaaaaaattgaacatagaattaccatatgacccagcaagttcacttctgggtataa-acccaa---aagagaaagcaggaactcaaagagatatttgtacacccatggtgtcatagcagcattattcacaatggccaaaaggtgaagacaactcaagtatatccatcaacaggtaaagaaag-----aaatatagaatat-atatatatag--------gaatattatttggcctaaaaaagg-----aattttgacacatactacaacatggatgaaccttgaggactttatgcttagagaagtaagccagtcacaaaaagacaaatctgtattaacttcactcataaaagatatctaaagtagtcaaattctt-agaaacaga i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27798515 349 + 88276631 ggttcctcaaaaaattaaacatagaattacca---------------------------ataattcccaaaagaaccgaaagcagagactcgaagaggtatttgtataccaattgtg--acagcagttttattcacaagagttaaaaggtagaagccgcccaag--tgtccactgacagataaaaaaaaaa---aaatgtggtctgc-acatgcaatg--------gaatattatccagtctcacaaagggaggaaattcagacatttgctacaacgtggatgaatcttaaaaacattatgctcagtgaagtaagacaattacaaagggataaatattatataatcccacttacatgccatacctagaacagtcaaattcgtaagagacaga i canFam3.chr4 C 0 I 589 e mm10.chr14 24237203 678 + 124902244 I e calJac3.chr12 75646789 567 - 121768101 I a score=489000.000000 s hg38.chr10_KI270825v1_alt 155778 203 + 188315 CAACttgagaggccaaggcggccagatcgcttgaatccaggagttcaagaccagcctgggcaacatggcaaagccccgtctctta-------------aaaaaatacaaaaacaaaaaatcagtcgggcatggtggcgggcgcctgtagtcccagctactcaggaggctgaggtgggagaatggcgtgaacccgggaggcagagcttgcagtgagc s panTro4.chr10 76533915 203 + 133524379 CAACttgagaggccaagtcggccagattgcttgaatccaggagttcaagaccagcctgggcaacatggcaaagccccgtctctta-------------aaaaaatacaaaaacaaaaaatcagtcgggcatggtggcgggcgcctgtagtcccagctactcaggaggctgaggtgggagaatggcgtgaacccgggaggcagagcttgcagtgagc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76202626 212 - 133410057 CAACttgagaggccaaggcggccagatcgcttgaacccaggagttcaagaccagcctgggcaacatggcaaagccccgtctctta----aaaaaaaacaaaaaatacaaaaacaaaaaatcagtcgggcatggtggcgggcgcctgtagtcccagctactcaggaggctgaggtgggagaatggcatgaacccgggaggcggagcttgcagtgagc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35138094 216 + 104879549 CAAAttgagaggccaaggcggccagatggcttgaatccaggagttcaagaccagcctgggcaacatggcaaagccccgttttttaaaaaaaaaaaaaaaaaaaatacaaaaacaaaaaattagtcaggcatggtggcgggtgcctgtagtcccagctattcaggaggctggtgtgggagaatggcgtgaacgcgggaggcggagcttgcagtgagc i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73931056 216 - 130959383 CAACttgtgaggccaaggcggccagatggcttgaacccaggagttcaagactagcctgggcaacatggcaaagccccatctctgaaaaaaaaaaatgcaaaaaatacaaaaacaaaaaattagctgggcatggtggcgggtgcctgtagtcccagctactcgggaggctgagactggagaatggcatgaacccaggaggcggaacttgcagtgagc i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75491619 216 - 133195287 CAACttgtgaggccaaggcggccagatggcttgaacccaggagttcaagactagcctgggcaacatggcaaagccccatctctgaaaaaaaaaaatgcaaaaaatacaaaaacaaaaaattagctgggcatggtggcgggtgcctgtagtcccagctactcgggaggctgagactggagaatggcgtgaacctgggaggcggagcttgcagtgagc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73354804 214 - 125196307 caacttgtgaggccaaggcggccagatcgcttgaacccaggagttcaagactagcctgggcaacatggcaaagccccatctctgaaaaaaaaaaatgc--aaaatacaaaaacaaaaaattagccgggcatggtggcgggcgcctgtagtcccagctactcgggaggctgagactggagaatggcgtgaacctgggaggcggagcttgcagtgagc i papAnu2.chr9 C 0 M 1701 s chlSab2.chr9 72188495 216 - 125710982 caacttgtgaggccaaggcggccagatcacttgaacccaggagttcaagactagcctgggaaacatggcaaagccccatctctgaaaaaaaaaaatgcaaaaaatacaaaaacaaaaaattagccgggcatggtggcgggcgcctgtagtcccagctactcaggaggctgagactggagaatggcgtgaacccgggaggcggagcttgcagtgagc i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27798864 589 + 88276631 I e mm10.chr14 24237203 678 + 124902244 I e calJac3.chr12 75646789 567 - 121768101 I a score=32881.000000 s hg38.chr10_KI270825v1_alt 155981 20 + 188315 cgagatcgcgccactgcact s panTro4.chr10 76534118 20 + 133524379 cgagatcgcgccactgcact i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76202838 20 - 133410057 cgagatcgtgccaccgcact i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35138310 20 + 104879549 cgagattgcgccactgcact i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73931272 20 - 130959383 cgagactgtgccactgcact i rheMac3.chr9 C 0 I 643 s macFas5.chr9 75491835 20 - 133195287 cgagatcgctccactgcact i macFas5.chr9 C 0 C 0 s chlSab2.chr9 72188711 20 - 125710982 cgagactgctccactgtact i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27798864 589 + 88276631 I e mm10.chr14 24237203 678 + 124902244 I e calJac3.chr12 75646789 567 - 121768101 I e papAnu2.chr9 73355018 1701 - 125196307 M a score=257879.000000 s hg38.chr10_KI270825v1_alt 156001 215 + 188315 gcagcctgggcaagagaacgagactccatctc--aaaaaaaaacaaacaaac--aaaaaaaGGagctgggtgtggtggcatgtgcctatagtccctgctactcgggaggctgaggtgggaggatcaattgagcatgggaggttgaagctgcagtgagccatga--gtaccaccgcactccatgcattccagcctgagcaacagagtgagactccatctcca s panTro4.chr10 76534138 213 + 133524379 gcagcctgggcaagagaacaagactccatctc--aaaaaaaaataaacaaa------aaaaGGagctgggtgtggtggcatgtgcctatagtccctgctactcgggaggctgaggtgggaggatcaattgagcatgggaggttgaagctgcagtgagccatgactgtaccaccgcactccatgcattccagcctgagcaacagagtgagactccatctcca i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76202858 220 - 133410057 ccagcctgggcaagagagcaagactccatctcaaaaaaaaaaacaaaaaaaca-aaaaaaaGGagctgggtgtggtggcatgtgcctatagtccctgctactcgggaagctgaggtgggaggatcaactgagcatggaaggtcgaagctgcagtgagccatgactgtaccaccgcactccatgcattccatcctgagcaacagagtgagaccccacctcca i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35138330 219 + 104879549 gcaacctgggcaacagagcgagactctattta--aaaaaaaaaaaaaaaaaaatacaaaaaGGagctgggtgtggtggcaggtgcctatagtccctgctactcacgaggctgaggtgggaggatcgattgagcatgggaggtcgaggctgcagtaagccatgactgtaccactgcactccatgcattccagcctgagcaacagagtgagaccccatctcca i nomLeu3.chr18 C 0 C 0 s macFas5.chr9 75491855 217 - 133195287 gcagcctggaccacagaatgagactccatctc--aaaaaataaaaaataaat--acaaaaaGGagctgggtgtggtggcatgtgcctgtagtccctgctactcaggaggctgaggtgggaagattgattgagcatgggaggtcgaggctgcagtgaaccatgactgtaccactgcactccatgcactccagcctgagcaacagagtgagaccccatctcca i macFas5.chr9 C 0 C 0 s chlSab2.chr9 72188731 217 - 125710982 gcagcctggacgacagaacgagactccatctc--aaaaaataaaaaataaat--acaaaaaGGagctgggtgtggtggcatgtgcctgtagtccctgctactcaggaggctgaggtgggaagattgattgagcatgggaggtcgaggctgcagtgaaccatgactgtaccactgcactccatgcactccagcctaagcaacagagtgagaccccatctcca i chlSab2.chr9 C 0 I 25 e canFam3.chr4 27798864 589 + 88276631 I e mm10.chr14 24237203 678 + 124902244 I e calJac3.chr12 75646789 567 - 121768101 I e papAnu2.chr9 73355018 1701 - 125196307 M e rheMac3.chr9 73931292 643 - 130959383 I a score=158362.000000 s hg38.chr10_KI270825v1_alt 156216 224 + 188315 -aaaaaaaaaaaa--gaagaa---------agagagagaGagaaagacagcaagaaagaaagaaa----------------------------gaaaaaaagaGACagacaggaaatattcatataatggtgactgtcaaggtctagggggccatgt--agttattattcaataggtacagagtttcgattttgcaagatgaaaaatttctagagatggatgg------tgctgatgtttgcacagcagtgtacaaatacttaatgctggct s panTro4.chr10 76534351 226 + 133524379 -aaaaaaaaaaaaaagaagaa---------aGagagagagagaaagacagcaagaaagaaagaaa----------------------------gaaaaaaagaGACagacaggaaatattcatataatggtgactgtcaaggtctagggggccatgt--agttattattcaataggtacagagtttcgattttgcaagatgaaaaatttctagagatggatgg------tgctgatgtttgcacagcagtgtacaaatacttaatgctggct i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76203078 242 - 133410057 -aaaaaaaaaaaaaagaagaagaaggaaagagagagagagagaaacacagcaagaaagaaagaaa-----------------------------aaaaaaaGAGACagacaggaagtattcatataatggtgactgtcaaggtataggggcccatgtagagttattattcaataggtactgagtttcgattttgcaagatgaaaaacttctagagatggatggtgttgatgttgatgtttgcacggcagtgtaaaaatacttaatgctgccc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35138549 222 + 104879549 -aaaaaaaaaaaaaaaaagaa------------gagagagacaaagacagcaagaaagcaagcaa------------------------gcaagaaagaaaCAGACagacaggaagtattcatataatggtgactgtcaaggtctagggggccatgtagagttattattcaataggtacagactttcgattttgcaagatgaaaaacttctagagatggatgg------tg-------ttgcacaacagtgtaaaaatacttaatgccggcc i nomLeu3.chr18 C 0 C 0 s macFas5.chr9 75492072 255 - 133195287 aaaaaaaaaaaaaaaGgagag---------agagagagagagaAAgaaggaaggaaggaaggaaggaaggaaggaaggaaagaaggaaagaaggaaACGAACGAACagacagaaagtattcatataatggtgactgtcaaggcctaggaggccatgtagagttattattcaaaaggta--gagtttcgattttgcaagatgaaaaacttctagggatggatgg------tgttgatgtttgcacaacagtgtaaaaatacttaatgctagcc i macFas5.chr9 C 0 C 0 e canFam3.chr4 27798864 589 + 88276631 I e mm10.chr14 24237203 678 + 124902244 I e calJac3.chr12 75646789 567 - 121768101 I e chlSab2.chr9 72188948 25 - 125710982 I e papAnu2.chr9 73355018 1701 - 125196307 M e rheMac3.chr9 73931292 643 - 130959383 I a score=197347.000000 s hg38.chr10_KI270825v1_alt 156440 385 + 188315 gggcgcagtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcacctgaggtacggagttcgagaccagcctggccaacgtggtgaaaccccgtctctactaaaaatacaaaaattagccaggcgtggtggtgggcacctg-taatctcagctacccgggagactgaggcaggagaacccaggaggcggaggttgtg--gtgagccgagatcatgccattgtactccagcctgggcaacaagagcaaaactctgtctcaaaaaaaaaaa-caaaaaacaaaaaacttaatgctactgaatttgtacacttaaaaagttattaaaatagtaaatgttatatatatttttccacaataaaaaaTGGTTCAAggccg s panTro4.chr10 76534577 386 + 133524379 gggcgcagtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcacctgaggtacggagttcgagaccagcctggccaacgtggtgaaaccccgtctctactaaaaatacaaaaattagccaggcgtggtggtgggcacctg-taatctcagctacccaggagactgaggcaggagaacccgggaggcggaggttgtg--gtgagccgagatcatgccattgtactccagcctgggcaacaagagcaaaactccgtctcaaaaaaaaaaaacaaaaaacaaaaaacttaatgctactgaatttgtacacttaaaaagttattaaaatagtaaatgttatatatatttttccacaataaaaaaTGGTTCAAggccg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76203320 386 - 133410057 gggcgcggtggctcacggctgtaatcccagcactttgggaggccgaggcgggtggatcacctgaggtagggagttcgagaccagcctggccaacgtggtgaaaccctgtctctactaaaaatacaaaaattagccaggcgtggtggcgggcgcctgttaatcccagctaccctggagactgaggcaggagaacccaggaggcggaggttgtg--gtgagccgagatcatgccattgtactccagcctgggcaacaagagcaaaattctgtctcaccaaaaaaaa-aaaaaaaaaaaaaacttaatgcaactgaacttgtacacttaaaaagttattaaaatagtaaatgttatatatatttttccacaataaaaaaTGGTTCAAggccg i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35138771 376 + 104879549 aggcatggtggctcacgcctgtaatcccagcactctgggaggccgaggcgggtggatcacctgaggtagggagttcgagaccagcctggccaacgtggtgaaaccctgtgtctactaaaaatacaaaaattagccaggcgtggtggtggacacctg-taatcccagctacccaggtgactgaggcaggagaacccaggaggcggaggttgtggtgtgagccgagatcacgccattgcactccagcctgggcaacaagagcaaaactccgtctcaaaaaaaaaaa------------aaacttaatgctactgaacttgtacacttcaaaagttattaaaatagtaaatgttatatatatttttccacaataaaaaaTGGTTCAAggccg i nomLeu3.chr18 C 0 C 0 e canFam3.chr4 27798864 589 + 88276631 I e mm10.chr14 24237203 678 + 124902244 I e calJac3.chr12 75646789 567 - 121768101 I e chlSab2.chr9 72188948 25 - 125710982 I e papAnu2.chr9 73355018 1701 - 125196307 M e macFas5.chr9 75492327 0 - 133195287 C e rheMac3.chr9 73931292 643 - 130959383 I a score=159784.000000 s hg38.chr10_KI270825v1_alt 156825 185 + 188315 ggtgcggtggctcacgcctgtaatcccagcactttgagaggccaaggtgggcggaccatttgaggtcaggagttcaagaccagcctggccaacatggggaaaccttgtctctactaaaaatacaaaaaaattagccaggtgtggtggcacatgcctgtagtcccagctacttgggaggctgaagg s panTro4.chr10 76534963 185 + 133524379 ggtgcggtggctcacgcctgtaatcccagcactttgagaggccaaggtgggcggatcatttgaggtcaggagttcaagaccagcctggccaacatggggaaaccttgtctctactaaaaatacaaaaaaattagccacgtgtggtggcacatgcctgtagtcccagctacttgggaggctgaagg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76203706 185 - 133410057 ggtgcagtagctcacgcctgtaatcccagcactttgagaggccaaggtgggtggatcatttgaggtcaggagttcaagaccagcctggccaacatggggaaaccttgtctctactaaaaatacaaaaaaattagccaggtgtggtggcgcatgcctgtagtcccagctacttgggaggctgaggg i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35139147 185 + 104879549 ggtgtggtggctcacgcctgtaatcccagcactttgagaggccaaggcaggcggatcatttgaggtcaggagttcaagacccgcctggccaacatggggaaaccttgtctctattaaaaatacaaaaaaatcagccaggcatggtggcgcatgcctgtagtcccagctactcaggaggctgaggc i nomLeu3.chr18 C 0 C 0 s macFas5.chr9 75492327 185 - 133195287 ggtgcagtggctcacgcctgtaatcccagcactttgggaggccaaggcgggcagatcatttgaagagaggagttcaagatcagcccggccaacatggggaaaccttgtctctactaaaaatacaaaaaaattagccaggcgtggtggcacatgcccgtagtcccagccactcgggaggctgaggc i macFas5.chr9 C 0 C 0 e canFam3.chr4 27798864 589 + 88276631 I e mm10.chr14 24237203 678 + 124902244 I e calJac3.chr12 75646789 567 - 121768101 I e chlSab2.chr9 72188948 25 - 125710982 I e papAnu2.chr9 73355018 1701 - 125196307 M e rheMac3.chr9 73931292 643 - 130959383 I a score=102794.000000 s hg38.chr10_KI270825v1_alt 157010 92 + 188315 aggagaattgctgcaactggggaggcgaaggttgca-tgagccgagatcgcaccattgcactccagcctaggtgacagagtgagactctgtat s panTro4.chr10 76535148 92 + 133524379 aggagaattgctgcaactggggaggcggaggttgca-tgagccgagatcgcgccattgcactccagcctaggtgacagagtgagactctgtat i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76203891 93 - 133410057 aggagaattgctgcaactgaggaggcggaggttgcagtgagccgagatcgcgccattgcactccagcctgggtgacagagtgagactccgtat i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35139332 93 + 104879549 agaagaattgctgcaactcgggaggctgaggttgcagtgagccgagatcgcgccactgcactccagcctgggcgacagagtgagactccgtat i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73931935 92 - 130959383 aggagaattgcttgaacccgggaggcggaggttgcagtgagctgagattgcacctcttcactccagcct-ggcaacaaaatgatactccgtat i rheMac3.chr9 I 643 C 0 s macFas5.chr9 75492512 93 - 133195287 aggagaattgctgaaactggggaggcagagcttgcagtgagccgagatcacgctactgtactccagcctgggcgccagagtgagactccgtat i macFas5.chr9 C 0 C 0 e canFam3.chr4 27798864 589 + 88276631 I e mm10.chr14 24237203 678 + 124902244 I e calJac3.chr12 75646789 567 - 121768101 I e chlSab2.chr9 72188948 25 - 125710982 I e papAnu2.chr9 73355018 1701 - 125196307 M a score=2100.000000 s hg38.chr10_KI270825v1_alt 157102 1 + 188315 c s panTro4.chr10 76535240 1 + 133524379 c i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76203984 1 - 133410057 c i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35139425 1 + 104879549 c i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73932027 1 - 130959383 c i rheMac3.chr9 C 0 I 1 s macFas5.chr9 75492605 1 - 133195287 c i macFas5.chr9 C 0 I 2 s canFam3.chr4 27799453 1 + 88276631 C i canFam3.chr4 I 589 C 0 e mm10.chr14 24237203 678 + 124902244 I e calJac3.chr12 75646789 567 - 121768101 I e chlSab2.chr9 72188948 25 - 125710982 I e papAnu2.chr9 73355018 1701 - 125196307 M a score=6790.000000 s hg38.chr10_KI270825v1_alt 157103 3 + 188315 aaa s panTro4.chr10 76535241 3 + 133524379 aaa i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76203985 3 - 133410057 aaa i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35139426 3 + 104879549 aaa i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73932029 3 - 130959383 aaa i rheMac3.chr9 I 1 C 0 s macFas5.chr9 75492608 3 - 133195287 aaa i macFas5.chr9 I 2 C 0 s chlSab2.chr9 72188973 3 - 125710982 aaa i chlSab2.chr9 I 25 C 0 s canFam3.chr4 27799454 3 + 88276631 AGA i canFam3.chr4 C 0 C 0 e mm10.chr14 24237203 678 + 124902244 I e calJac3.chr12 75646789 567 - 121768101 I e papAnu2.chr9 73355018 1701 - 125196307 M a score=28579.000000 s hg38.chr10_KI270825v1_alt 157106 18 + 188315 aaaaaaaaa------------ggttcaaat s panTro4.chr10 76535244 19 + 133524379 aaaaaaaaa-----------aggttcaaat i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76203988 30 - 133410057 aaaaaaaaaaaaaaaaaaaaaggttcaaat i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35139429 21 + 104879549 aaaaaaaaa---------aaaggttcaaat i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73932032 18 - 130959383 aaaaaaaaa------------GGTTTCAAT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75492611 18 - 133195287 aaaaaaaaa------------ggtttcaat i macFas5.chr9 C 0 C 0 s chlSab2.chr9 72188976 18 - 125710982 aaaaaaaaa------------ggtttcaat i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75647356 18 - 121768101 aaaaaaaAT------------AGTTCAAAT i calJac3.chr12 I 567 C 0 s canFam3.chr4 27799457 17 + 88276631 GGGGAAAAT------------GGTTCAAT- i canFam3.chr4 C 0 C 0 e mm10.chr14 24237203 678 + 124902244 I e papAnu2.chr9 73355018 1701 - 125196307 M a score=478964.000000 s hg38.chr10_KI270825v1_alt 157124 176 + 188315 ggtaaa--tttcatgttatgtaaa--ttattatcacaa-ttTTGTTTAAATCCTCAAAGCAAATGGGTTATGAGCCTT-----AGTGTGAAATGAACGTCAAGGTCAAC--------AGGAATTATCTACCAAGGGTTTAGAGGGATAGACTGCCAACATGGGACGCTCCAAACATCTCTATTTGGTTTAAAAT s panTro4.chr10 76535263 176 + 133524379 ggtaaa--tttcatgttatgtaaa--ttattatcacaa-ttTTGTTTAAATCCTCAAAGCAAATGGGTTATGAGCCTT-----AGTGTGAAATGAACGTCAAGGTCAAC--------AGGAATTATCCACCAAGGGTTTAGAGGGATAGACTGCCAACATGGGACACTCCAAACATCTCTATTTGGTTTAAAAT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76204018 184 - 133410057 ggtaaa--tttcatgttatgtaaa--ttatcatcacaa-ttTCCTTTAAATCCTCAAAGCAAATGGGTTATGAGCCTT-----AGTGTGAAATGAATGTCAAAGTCAACAGTCAACTAGGAATTATCCACCAAGGGTTTAGAGGGATAGACTGCCAACATGGGACACTCCGAACATCTCTATTTGGTTTAAAAT i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35139450 169 + 104879549 ggtaaa--tttcatgttatgtaaa--ttattatcacaa-ttTTGTTTAAATCCTCAAAGCAAATGGGTTATGAGCCTT-----AGTGTGAAATGAACGTCAAGGTGAAC--------AG-------TCAACTAGGAATTAGAGGGATAGACTGCCAACATGGGACACTCCAAACATCTCTGTTTGGTTTAAAAT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73932050 189 - 130959383 GGTAAA--TTTCATGTTATGTAAA--TTATTATCACAA-TTTTGTTTAAATCCTCAAAGTAAATGGGTTATGAGCCTTTTTGAAGTGTGAAATGAACGTCAAGGTCAACAGTCAACTAGGAATTATCCACCAAGGGTTTAGAGGGATAGACTGCCAACATGGGACACTCCAACCATCTCTGTTTGGTTTAAAAT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75492629 189 - 133195287 ggtaaa--tttcatgttatgtaaa--ttattatcacaa-ttTTGTTTAAATCCTCAAAGTAAATGGGTTATGAGCCTTTTTGAAGTGTGAAATGAACGTCAAGGTCAACAGTCAACTAGGAATTATCCACCAAGGGTTTAGAGGGATAGACTGCCAACATGGGACACTCCAACCATCTCTGTTTGGTTTAAAAT i macFas5.chr9 C 0 C 0 s chlSab2.chr9 72188994 187 - 125710982 ggtaaa--tttcatgttatgtaaa--ttattatcacaa-ttTTGTTTAAATCCTCAAAGCAAATGGGTTATGAGCCTTTTTGAAGTGTGAAATGAACGTCAAGGTCAACAGTCAACTAGGAATTATCCACCAAGGGTTTAGAGGGATAGACTGCCAACATGGGACACTCCAACCA--TCTGTTTGGTTTAAAAT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75647374 185 - 121768101 TGTAAA--TTTCATGTTCTGTGAA--TTCTTATTGTAATTTTTGTTTAAATCCTCAAAGTAAATGGGTTATGACCCTT-----AGTGTGAAATAAATGTCAAGGTCAACAGTCAACTAGGAATTATCCACCAAGGGTTTAAAGGGATAGACTGCCAATGTGGGACACTCCGAACGTCTCTGTTTGGTTTAAAAT i calJac3.chr12 C 0 I 301 s mm10.chr14 24237881 161 + 124902244 GGTACA--TCTTACGGTGTGTAAGTCTTACTACTAAAA-----ATATAACAGCTCAGAGCAGACGAGTTCCGCCCCCT-----AGGCCGAAGTGAACGTCA--GTCAGC---------------ATCCTTCCCAGGAT--AAAGGTTGGATAGTCTACATGGGATACTCCAAATA--CTTGTTCAGGCAAAAAT i mm10.chr14 I 678 C 0 s canFam3.chr4 27799474 182 + 88276631 GGTAAGTTTTTTATGTTTCATATA--TT-TTATCAAAA-TAAAAAACAAAA-CTCAAAGCGAAGGGGTTATGACCCTT-----AGTGTGAGATGGACGTCACGGTGAACCGTCGCCTCTCGATTATCCATCAAGGGGTTAGA--GTTGGATGGCCAACGTGGGGTGCTCCAAACATCTCCGTTTAGTTTTAAAT i canFam3.chr4 C 0 C 0 e papAnu2.chr9 73355018 1701 - 125196307 M a score=478133.000000 s hg38.chr10_KI270825v1_alt 157300 165 + 188315 GTTTCTGTAGCACTTTTGTGGAACGCAGTCTCAAAAAGATCAATAGAGATACACCGTTCAGAGGAATGCAGTCTATCCCAGGTAAAAGGCGAAAAAAA--------------------AATCCA--ATTTCCCCCCAGCGCAATCCCATTTAAGATTCTTCCCTGCTGAACACACATAGCATCCCTA s panTro4.chr10 76535439 165 + 133524379 GTTTCTGTAGCACTTTTGTGGAACGCAGTCTCAAAAAGATCAATAGAGATACACCGTTCAGAGGAATGCAGTCTATCCCAGGTAAAAGGCGAAAAAAA--------------------AATCCA--ATTTCCCCCCAGCGCAATCCCATTTAAGATTCTTCCCTGCTGAACACACATAGCATCCCTA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76204202 165 - 133410057 GTTTCTGTAGCACTTCTGTGGAACACAGTCTCAAAATGATCAATAGAGATACACAGTTCAGAGGTATGCAGTCTATCCCAGGTAAAAGGCGAAAAAAA--------------------AATCCA--ATTTCCCCCCAGCGCAATCCCATTTAAGATTCTTCCCTGCTGAACACACATAGCATCCCTA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35139619 185 + 104879549 GTTTCTGTAGCACTTTTGTGGAACGCAGTCTCAAAACGATCAATAGAGATACACAGTTCAGAGGTATGCAGTCTATCCCAGGTAAAAGGCGAAAAAAAATCCAATTTCCCCCCAGCGCAATCCA--ATTTCCCCCTAGCGCAATCCCATTTAAGATTCTTCCCTGGTGAACACAAATAGCATCCCTA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73932239 164 - 130959383 GCTTCTGTAGCTCTTTTGTGGAATGCAGTCTCAAAAAGATCAATAGAGATATACAGTTCAGAGGTATGCAATCTATCCCAGGTAAAAGGCGAAAAAA---------------------AATCCA--ATTTCCCCCCAGCACAATCCCATTTAAGATTCTTCCCTGCTGAACACACATAGCATCCCTA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75492818 164 - 133195287 GCTTCTGTAGCTCTTTTGTGGAATGCAGTCTCAAAAAGATCAATAGAGATATACAGTTCAGAGGTATGCAATCTATCCCAGGTAAAAGGCGAAAAAA---------------------AATCCA--ATTTCCCCCCAGCACAATCCCATTTAAGATTCTTCCCTGCTGAACACACATAGCATCCCTA i macFas5.chr9 C 0 C 0 s chlSab2.chr9 72189181 164 - 125710982 GCTTCTGTAGCTCTTTTGTGGAATGCAGTCTCAAAAAGATCAATAGAGATATACAGTTCAGAGGTATGCAATCTATGCCAGGTAAAAGGCGAAAAAA---------------------AATCCA--ATTTCCCCCCAGCGCAATCCCATTTAAGATTCTTCCCTGCTGAACACACACAGCATCCCTA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75647860 164 - 121768101 GTTTCTGTAGCACTTTTCTGGAATACAGTCTCAAAAAGATCAATAGAGATACACAGTTCAGAGGTATGCAATCTACCCCAGGTAAAAGGCGAAAAAA---------------------GATCCA--ATTTCCCCCCAGCACAACCCCATTTAAAATTCTTCCCTGCTGAACGTACATATCATCCCTA i calJac3.chr12 I 301 I 2 s mm10.chr14 24238042 158 + 124902244 GTTTCTGCCGTCCTTTTGTGGAACTCCACCTCAAAAATAACA--------ACACAGCGTAAAGATTTACAACTCGTTCTAGGAAAATGGGGAAGGAAAAAAA----------------ATTCCC--GGTTATTTCTGGTTCTATCCCATTTAAAA---TGCCCTGCTAAACACACCAGGCAGCCCCA i mm10.chr14 C 0 C 0 s canFam3.chr4 27799656 168 + 88276631 GTTTCTGTAGCACTTTCATGGAATTCTGTCTCAAAAAGG----TAGAGGCACAAAATTCAGGGACATGCTACTTGGCCCAGGGAAATGTGAGAAACAGTGTAA---------------CACCCATCACCCACCCCCAGCTCAATCCCATTTAAAAGTCTTCTCTGCTGAACACACTCTGCATCCCTA i canFam3.chr4 C 0 C 0 e papAnu2.chr9 73355018 1701 - 125196307 M a score=341061.000000 s hg38.chr10_KI270825v1_alt 157465 149 + 188315 CTGTCCAGGCCAACAC--GCAGCTCAGCCCTCTTTCTCTA----TGTTTGCTACCTCTGTGGCTCACATCTTCCCAGGGTTTCAGGAAACGACTATAGAGC-CCCCTCGCATGGG---GCAGAACATACAGGTGGTTGGAATGAGGTGGGACAAAAAAA s panTro4.chr10 76535604 149 + 133524379 CTGTCCAGGCCAACAC--GCAGCTCAGCCCTCTTTCTCTA----TGTTTGCTACCTCTGTGGCTCACATCTTCCCAGGGTTTCAGGAAACGACTATAGAGC-CCCCTCACATGGG---GCAGAACATACAGGTGGTTGGAATGAGGTGGGACAAAAAAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76204367 149 - 133410057 CTGCCCAGGCCAACAC--GCAGCTCAGCCCTCTTTCTCTA----TGTTTGCCACCTCTGTGGCTCACGTCTTCCCAGGGTTTCAGGAAACGACTCTAGAGC-CCCCTCGCATGGG---GCAGAACATACAGGTGGTTGGAATGAGGTGGGACAAAAAAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35139804 149 + 104879549 CTGCCCAGGCCAACGT--GCAGCTCAGCCCTCTTTCTCTA----CATTTGCTACCTCTGTGGCTCACATCTTGCCAGGGTTTCAGGAAATGACTGTAGAGC-CCCCTCGCGTGGG---GCAGAACATACAGGTGGTTGGAATGAGGTGGGACAAAAAAA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73932403 149 - 130959383 CTGCCCAGGCCAACAC--GCAGCTCAGCCCTCTTTCTCTA----CGTCTGCTACTTCTGTGGCTCACACCTTCCCAGGGTTTCAGGAAATGACTGTAGAGC-CCCCTCACACAAG---GCGGAACATACAGGTGGTTGAAATGAGGTGGGACAAAAAAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75492982 149 - 133195287 CTGCCCAGGCCAACAC--GCAGCTCAGCCCTCTTTCTCTA----CGTCTGCTACTTCTGTGGCTCACACCTTCCCAGGGTTTCAGGAAATGACTGTAGAGC-CCCCTCACACAAG---GCAGAACATACAGGTGGTTGAAATGAGGTGGGACAAAAAAA i macFas5.chr9 C 0 C 0 s chlSab2.chr9 72189345 149 - 125710982 CTGCCCAGGCCAACAC--ACAGCTCAGCCCTCTTTCTCTA----CGTCTGCTACTTCTGTGGCTCACATCTTCCCAGGGTTTCAGGAAATGACTGTAGAGC-CCCCTCGCACAAG---GCAGAACATACAGGTGGTTGGAATGAGGTGGGACAAAAAAA i chlSab2.chr9 C 0 C 0 s mm10.chr14 24238200 149 + 124902244 --GCTCCAGCCAGCAATGGCAACTCAGCGCTGCTGCTCTGGGCCCGATTGCTGTCCCTCCAGCCCACATCTTCC--------CAGGAAATCACCGCAGAGCTCCCCTCCCACTGGGCTGCAGAAGGTACAGGTGCTTCATATGAGGTAGGGGTAAAAAA i mm10.chr14 C 0 C 0 s canFam3.chr4 27799824 132 + 88276631 CTGCACAGACTGAGAA--GCAGCTCAGCCCTCTTGCTCTA----TGCCTAATGTTCCTGAGGCTCGTGTCTTCCCAAGGTTACA-AAAATTACTGAAGA-C-CCCCTGGCACTGGCCTGCAGAATATACAGGTGGCTGGAA------------------ i canFam3.chr4 C 0 C 0 e calJac3.chr12 75648024 2 - 121768101 I e papAnu2.chr9 73355018 1701 - 125196307 M a score=100268.000000 s hg38.chr10_KI270825v1_alt 157614 67 + 188315 AA-TGAGACAACggccgagagtggtggctcatgcctataatcacagcactctgggaggctgaggtagg s panTro4.chr10 76535753 67 + 133524379 AA-TGAGACAACAgccgagagtggtggctcatgcctgtaatcacagcactctgggaggctgagggagg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76204516 67 - 133410057 AA-TGAGACAACggccaagaacggtggctcatgcctgtaatcccagcactctgggaggctgaggcagg i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35139953 68 + 104879549 AACTGAGACAACAgccgggagcagtggctcatgcctgtaatcccagcactctgggaggctgaggcagg i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73932552 67 - 130959383 AC-TGAGACAATggccagcagcggtggctcatgcctataatctcagcattctgggaggctgaggcagg i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75493131 67 - 133195287 AC-TGAGACAATggccagcagcggtggctcatgcctataatctcagcattctgggaggctgaggcagg i macFas5.chr9 C 0 C 0 s chlSab2.chr9 72189494 67 - 125710982 AC-TGAGACAATggccaggagcggtggctcatgcctataatcccagcattctgggaggctaaggcagg i chlSab2.chr9 C 0 C 0 s canFam3.chr4 27799956 9 + 88276631 -----------------------------------------------------------TGAGATAGG i canFam3.chr4 C 0 I 9 e mm10.chr14 24238349 0 + 124902244 C e calJac3.chr12 75648024 2 - 121768101 I e papAnu2.chr9 73355018 1701 - 125196307 M a score=98034.000000 s hg38.chr10_KI270825v1_alt 157681 57 + 188315 cggatcacctgaggtcaggaattcgagaccagcctggccaagatggcaaaatcccgt s panTro4.chr10 76535820 57 + 133524379 cggatcacctgaggtcacgaattcgagaccagcctggccaagatggcaaaatcccgt i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76204583 57 - 133410057 cggatcacctgaggtcaggaattcgaaaccagcctggccaagatggcaaaatcctgt i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35140021 57 + 104879549 tggatcacctgaggtcaggaatttgagaccagcctggccaagatggcaaaaccccgt i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73932619 57 - 130959383 cggatcacctgaggtcaggagttccgaaccggcctggcaaagatggcaaaaccccgc i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75493198 57 - 133195287 cggatcacctgaggtcaggagttccggaccagcctggccaagatggcaaaaccccgc i macFas5.chr9 C 0 C 0 s chlSab2.chr9 72189561 57 - 125710982 cggatcacctgaggtcaggagttccagaccagcctggctaagacggcaaaaccctgt i chlSab2.chr9 C 0 C 0 e canFam3.chr4 27799965 9 + 88276631 I e mm10.chr14 24238349 0 + 124902244 C e calJac3.chr12 75648024 2 - 121768101 I e papAnu2.chr9 73355018 1701 - 125196307 M a score=11669.000000 s hg38.chr10_KI270825v1_alt 157738 5 + 188315 ctcta s panTro4.chr10 76535877 5 + 133524379 ctcta i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76204640 5 - 133410057 ctcta i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35140078 5 + 104879549 ctgta i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73932676 5 - 130959383 ctcta i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75493255 5 - 133195287 ctcta i macFas5.chr9 C 0 C 0 s chlSab2.chr9 72189618 5 - 125710982 ctcta i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75648026 5 - 121768101 ctcta i calJac3.chr12 I 2 C 0 e canFam3.chr4 27799965 9 + 88276631 I e mm10.chr14 24238349 0 + 124902244 C e papAnu2.chr9 73355018 1701 - 125196307 M a score=81350.000000 s hg38.chr10_KI270825v1_alt 157743 39 + 188315 ctaaaaatataaaaattagccgggggtgatggcacacac s panTro4.chr10 76535882 39 + 133524379 ctaaaaatataaaaattagccgggggtgatggcacacac i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76204645 39 - 133410057 ctaaaaatataaaaattagccgggggtgatggcgcacac i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35140083 39 + 104879549 ctaaaaatataaaaattagctgggggtggtggcgcacac i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73932681 39 - 130959383 cgaaaaatacaaaaattagctgggggtggtggtgcggac i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75493260 39 - 133195287 ctaaaaatacaaaaattagctgggggtggtggtgcgtac i macFas5.chr9 C 0 C 0 s chlSab2.chr9 72189623 39 - 125710982 ctaaaaatacaaaaattagctgggggtggtggtgcgcac i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75648031 38 - 121768101 ctaaaaatac-aaaattagccaggggtggtggcacgcac i calJac3.chr12 C 0 C 0 s mm10.chr14 24238349 16 + 124902244 Ccacaaacaca-----------------------cacac i mm10.chr14 C 0 C 0 e canFam3.chr4 27799965 9 + 88276631 I e papAnu2.chr9 73355018 1701 - 125196307 M a score=283183.000000 s hg38.chr10_KI270825v1_alt 157782 126 + 188315 ctgtaatcccagccactcggaaggctgagacaagagaatcacttgaacctgggaggcagagggtgcagtaagctgagattgcaccactgcactccagcctgggcgacagagcaaggctccatctc--a s panTro4.chr10 76535921 126 + 133524379 ctgtaatcccagccactcggaaggctgagacaagagaatcacttgaacctgggaggcagaggttgcagtaagctgagattgcaccactgcactccagcctgggcgacagagcaaggctccatctc--a i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76204684 126 - 133410057 tggtaatcccagccactcggaaggctgagacaagagaatcacttgaatctgggaggcagaggttgcaataaactgagattgcgccactgcactccaccctgggtgacaaagcaaggctccgtctc--a i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35140122 125 + 104879549 ctgtaatcccagctactcgggaggctgagacaagagaatcacttgaacctgggaggcagaggttgcactgagctgagattgcgccactgcactccagcctgggcaacagagcaaggctccatctc--- i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73932720 125 - 130959383 ctgtaatcccagctactcaggaagctgagacaagagaatcacttgaacctgggaggcagaggtttcagtgagctgagattgcatcactgcactccagcctgggtgacagagtaaggctccatctc--- i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75493299 125 - 133195287 ctgtaatcccagctactcaggaagctgagacaagagaatcacttgaacctgggaggcagaggtttcagtgagctgagattgcatcactgcactccagcctgggtgacagagtaaggctccatctc--- i macFas5.chr9 C 0 C 0 s chlSab2.chr9 72189662 128 - 125710982 ctgtaatctcagctactcaggaagctgagacaagagaatcacttgaacctgggaggcagaggtttcagtgagctgagattgcaccattgcactccagcctgagtgacagagtaaggctccatctcaaa i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75648069 125 - 121768101 ccgtaatcccagctgcttgggaggctgagataagagaagcacttgaacccgggagacagaggttgcagtgaactgagattgtgccactgcactccagcctgggcgacagagcaaggctctgtctc--- i calJac3.chr12 C 0 C 0 e canFam3.chr4 27799965 9 + 88276631 I e mm10.chr14 24238365 0 + 124902244 C e papAnu2.chr9 73355018 1701 - 125196307 M a score=5916.000000 s hg38.chr10_KI270825v1_alt 157908 15 + 188315 aaacaaacaaacaaa s panTro4.chr10 76536047 15 + 133524379 aaacaaacaaacaaa i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76204810 15 - 133410057 aaaaaaaaaaaaaaa i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35140247 2 + 104879549 -------------aa i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73932845 10 - 130959383 -----aaaaaaaaaa i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75493424 8 - 133195287 -------aaaaaaaa i macFas5.chr9 C 0 C 0 s chlSab2.chr9 72189790 15 - 125710982 aaaaaaaaaaaaaaa i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75648194 14 - 121768101 -aaaaagaaaaagaa i calJac3.chr12 C 0 C 0 s mm10.chr14 24238365 12 + 124902244 ---agacacacacac i mm10.chr14 C 0 C 0 e canFam3.chr4 27799965 9 + 88276631 I e papAnu2.chr9 73355018 1701 - 125196307 M a score=1250905.000000 s hg38.chr10_KI270825v1_alt 157923 485 + 188315 aaaaa-----------aaCTGAAACAAAATATTTATCCTACTCTGCTTACTTTTTCAGGAAATGGAAAACCAGAGTATCA------------AAAACCACTCAACACTAACATTAAATCAGATTAACAGCAATCCTGATGTAGAGCTGGAAGGGCCCCCA-AAATCGAGTCCAACCCAATCACC-CAACCTCCTTGGACCAAATGCCACCTGGGAAGTGCTCAAAACCCCACAGGAATGAGCAAGTCTCCCGTCAATGCTCAACCT---CTTCTGTTTTGACTGT-TGAACTGGGG--GA-----AAAAAAAAAAA--------CAAGCACCAGGAAGCTAAAAGGCTCTGCCAAGGTCAAGATTTTG--CAGTTAGGAACAGATCTCCAGTTCAGGGC--ttttttttttttttttttttttttttttAAAGAAAAGTTCCTCAGTATTCTTTTGAGGACATCAAGTTGACATTCAAATTCTATGTGTAGAAAGGGAATGACTTTCTACTCTT-----AGACAGCGTGGGTGCTCCA s panTro4.chr10 76536062 492 + 133524379 aaaaacaaaaaaaaAAAACTGAAACAAAATATTTATCCTACTCTGCTTACTTTTTCAGGAAATGGAAAACCAGAGTATCA------------AAAACCACTCAACACTAACATTAAATCAGATTAACAGCAATCCTGATGTAGAGCTGGAAGGGCCCCCA-AAATCAAGTCCAACCCAATCACC-CAACCTCCTTGGACCAAATGCCACCTGGTAAGTGCTCAAAACCCCACAGGAATGAGCAAGTCTCCCGTCAATGCTCAACCT---CTTCTGTTTTGACTGT-TGAACTGGGG--GA-----AAAAAAAAAAA-------ACAAGCACCAGGAAGCTAAAAGGCTCTGCCAAGGTCAAGATTTTG--CAGTTAGGAGCAGATCTCCAGTTCAGGGC--ttttttttttttttttttttttt-----AAAGAAAAGTTCCTCAGTATTCTTTTGAGGACATCAAGTTGACATTCAAATTCTATGTGTAGAAAGGGAATGACTTTCTACTCTT-----AGACAGTGTGGGTGCTCCA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76204825 488 - 133410057 aaaaa-------aaaaaaCTGAGACAAAATATTTATCCTACTCTGCTTACTTTTTCAGGAAATGGAAAGCCAGAGTATCA------------AAAACCACTCAACACTAACATTAAATCAGATTAACAGCAATCCTGATGTAGAGCTGGAAAGGCCCCCA-AAATCGAGTCCAACCCAATCACC-CAACCTCCTTGGACCAAATGCCACCTGGGAAGTGCTCAAAACCCCACAGGAATGAGCAAGTCCCCCATCAATGCTCAACCT---CTTCTGTTTTGACTGT-TGAACTGGGG--AA-----AAAAAAAAAAA---AAAAACAAGCACCAGGAAGCTAAAAGGCTCTGCCATGGTGAAGATTTTG--CAGTTAGGAGCAGACCTCCAGTTCAGGAC--TTTTTTTTTTTTTTTTTTTCCT------AAAGAAAAGTTCCTCAGTATTCTTTTGAGGACATCAAGTTGACATTCAAAATCTATGTGTAGAAAGGGAATGACTCTCTACTCTT-----AGACAGTGTGGGTGCTCCA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35140249 487 + 104879549 aaaaa-----------aaCTGAGACAAAATATTTATCCTACTCTGCTTACTTTTTCAGGAAATGGAAAGCCAGAGTATCA------------AAAACCACTCAACACTAACATTAAATCAGATTAACAGCAATCCTGATGTAGAGCTGGAAGGGGCCCAA-AAATCAAGTCCAACCCAATCACC-CAACCTCCTTGGACCAAATGCCACCTGGGAAGTGCTCAAAACCCCACAGGAATGAGCAAGTCCCCCGTCAATGCTCAACCT---CTTCTGTTTTGACTGT-TGAACTGGGa--aa-----aaaaaacaaaaacaaaaaacaaGCACCAGGAAGCTAAAAGGCTCTGCCAAGGTCAAGATTTTG--CAGTTAGGAGCAGATCTCTAGTTCGGGGC--ttttttttttttttttt-----------AAAGAAAAGTTCCTCAGTATTCTTTTGAGGACATCAAGTTGACATTCAAATTCTATGTGTAGAAAGGGAATGACTCTCTACTCTTACAACAGACAGTGTGGGTGCTCCA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73932855 483 - 130959383 aaaaa-----------aaCTGAGACAAAATATTTATCCTACTCTGCTTACTTTTCCAGGAAATGGAAAGCCAGAGTATCA------------AAAACCACTCAACACTAACATTAAATCAGATTAACAGCAATCCTGATGTAGAGCTGGAAGGGCCCCCA-AAATCGAGTCCAACCCAATCACC-CAACCTCCTTGGACCAAATGGCACCTGGGAAGTGTTCAAAACCCCACAGGAATGAGCAAGTCCCTCGTCAATGCTCAACCT---CTTCTGTTTTGACTGT-TGAACTGGGG-------------AAAAAAA---AAAAACAAGCACCAGGAAGCTAAAAGGCTCTGCCAAGGTCAAGATTTTG--CAGTTACGAGCAGATCTCCAGTTCAGGGC--tttttttttttttttttttttt------tAAGAAAAGTTCCTCAGTATTCTTTTGAGGGCATCAAGTTGACATTCAAATTCTATGTGTAGAAAGGGAATGACTCTCTACTCTTACAACAGCCAGTGTGGGTGCTCCA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75493432 493 - 133195287 aaaaa-----------aaCTGGGACAAAAAATTTATCCTACTCTGCTTACTTTTCCAGGAAATGGAAAGCCAGAGTATCA------------AAAACCACTCAACACTAACATTAAATCAGATTAACAGCAATCCTGATGTAGAGCTGGAAGGGCCCCCA-AAATCGAGTCCAACCCAATCACC-CAACCTCCTTGGACCAAATGGCACCTGGGAAGTGTTCAAAACCCCACAGGAATGAGCAAGTCCCCCGTCAATGCTCAACCT---CTTCTGTTTTGACTGT-TGAACTGGGGaaaa-----aaaaaaaaaaa---aaaaacaaGCACCAGGAAGCTAAAAGGCTCTGCCAAGGTCAAGATTTTG--CAGTTACGAGCAGATCTCCAGTTCAGGGCtttttttttttttttttttttttt------tAAGAAAAGTTCCTCAGTATTCTTTTGAGGGCATCAAGTTGACATTCAAATTCTATGTGTAGAAAGGGAATGACTCTCTACTCTTACAACAGCCAGTGTGGGTGCTCCA i macFas5.chr9 C 0 C 0 s chlSab2.chr9 72189805 470 - 125710982 aaaaa-----------aaCTGAGACAAAATATTTATCCTACTCTGCTTACTTTTCCAGGAAATGGAAAGTCAGAGTATCA------------AAAACCACTCAACACTAACATTAAATCAGATTAACAGCAATCCTGATGTAGAGCTGGAAGGGCCCCCA-AAATCGAGTCCAACCCAATCACC-CAACCTCCTTGGACCAAATGGCACCTGGAAAGTGCTCAAAACCCCACAGGAATGAGCAAGTCCCCCGTCAATGCTCAACCT---CTTCTGTTTTAACTGT-TGAACTGGGG--aa-----aaaaaaaaaaa---aaaaacaaGCACCAGGAAGCTAAAAGGCTCTGCCAAGGTCAAGATTTTG--CAGTTATGAGCAGATATCCAGTTTAGGGC------------TTTTTCTTCTTT------AAAGAAAAGTTCCTCAGTATTCTTTTGAGGACATCAAGTTGACATTCAAATTCTATGTGTAAAAAGGGAATG---------TCTTACAACAGCCAGTGTGGGTGCTCCA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75648208 454 - 121768101 aaaaa-----------aaCTGAGACAAAATATTTATCCCACTCTGCTTACTTTT-CAGGAAATGGAAC-CCAACATATCA------------AAAACCACTCAACACTAACATTAAATCAGATTAACAGCAATCATGATGCAGC----------CCTCCA-AAATTGAGTCCAACCCAATCATT-CAACCTTCTTGGGCCAAATGC--CCTGGGAAGTGCTCAAAATCCCACAGGAATGAGCAAGTCCCCCGTCAATGCTCAACCT---CTTCTGTTTTGACTAC-TGAATGGGGG---------------CGGGA----------AGTACCAGGAAGCTAAGAGGCTCTGCCAAGGTCAAGATTTTG--CAGTTAGGAGCAGATCTCCAGTTCAGGAC--TTTTTTTTTATTCTTT------------AAAGAAAGGCTCCTTAGTATTCTTTTGAGGATGCTATGTTGACATTCAAATTCTATGGGTAGAAAGAGAACGACTCTCTACTCTTACAACAGGCAGTGTGGGTGCTCCA i calJac3.chr12 C 0 C 0 s mm10.chr14 24238377 377 + 124902244 acaca-----------AACTGAGACAAAATACTT---CTACTCTACTCCCTTTTTCAGGAAGTGGAGG--TAGAGAATC-------------GAAACCACCTCACACTAGCATTAAAGCAGAGTAGGA-TAACCACAGTGCAGAGCTGGAACCACCCCCAGAAATCCACTCCAACACGACTGCCACACACCCCTGGGACTAAAAGCCATCTGGGGAGTGCTCAGAACCCCACCGGACTGAGAAACTCCCCATTCAGTGCCTCCCTA---ATTCTGTTT--GCTGT-TGAACAAGGG----------------------------------CCAGAAAGCTAAGAGGCTCAGCCAGGGTCAGA--CCCA--CACTTAGAAACAGATC-CCACATGGAGGC--------------------------------------------------TCCTTCAAGGACAGTTGGCTGGTATTAGAATC-------TGAAAAGGAAACG----TTGTCTCG------------------------- i mm10.chr14 C 0 C 0 s canFam3.chr4 27799974 457 + 88276631 AAAAC-----------ACCCAACACAAAATATTTCTCCTATGTGGCTTACTTTTTCAGGAAAAAGAAAGCCAGAGtataaaaataaaaaaataaaaCCACTCAACCCTAACACTGAATCAGAA-AACAGTAACCATGGTACAAAGCTAGAAG---TCTCA-GAATCACGCCCAAATC-----CC-GAGCTTCCCTGGACAGAACGCCACCTTGGCAGCGCTGAGAATCCCATAGGACTGAGCAAGCCCTTGCT---TACTCAAGCTACACTTCTAGTTTGACCATAAGTACTGGAA--AAACAACAACAACAACAA---AAACCCAAGCACCAGGTGGCTAAGAAGCTCATCCAAGGTCAAGATATTGCACAGTTAGGAGCAGATCCCCA-TCCAGGTC--------------------------------------------------TCTTTCGAGGACACCAAGCTGACATTCAAATTCTGAGAGTGAAAAGGAAAGGTGTCTCCAACCCCGTAACAGACAATGTGGGCACCCCA i canFam3.chr4 I 9 C 0 e papAnu2.chr9 73355018 1701 - 125196307 M a score=604908.000000 s hg38.chr10_KI270825v1_alt 158408 143 + 188315 CATGGCTCCTGGCAGCCAGCTCCACACCACCAGTACCTGATGGGCAACCTTGGGAACTTCAGACATCAATGTCACACCACCTGCTTCCATCACAGACATACCGTGGGCGGTGATATCCCTGTGTACATCTGGGGCTTGCTC-AA s panTro4.chr10 76536554 143 + 133524379 CATGGCTCCTGGCAGCCAGCTCCACACCACCAGTACCTGATGGGCAACCTTGGGAACTTCAGACATCAATGTCACACCACCTGCTTCCATCACAGACATACCGTGGGCGGTGATATCCCTGTGTACATCTGGGGCTTGCTC-AA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76205313 143 - 133410057 CATGGCTCCTGGCAGCCAGCTCCACACCACCAGTACCTGATGGGCAACCTTGGGAACTTCAGACATCAATGTCACACCACCTGCTTCCATCACAGACATACCGTGGGCGGTGATATCCCTGTGTATATCTGGGGCTTGCTC-AA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35140736 143 + 104879549 CATGGCTCCTGGCAGCCAGCTCCACACCACCAGTACCTTATGGGCAACCTTGGGGACTTCAGACATCAATGTCACACCACCTGCTTCCATCACAGACATACCATGGGCAGTGATATCCGTGTGTACATCTGGGGCTTCCTC-AA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73933338 143 - 130959383 CATGGCTCCTGGCAGCCAGCCCCACACCGCCAGTACCTGATGGGCAACCTTGGGGACTTCAGACATCAATGTCACACCACCTGCTTCCATCACAGACATACCGTGGGCGGTGATATCCATGTGTACATCTGGGGCTTGCTC-AA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75493925 143 - 133195287 CATGGCTCCTGGCAGCCAGCCCCACACCGCCAGTACCTGATGGGCAACCTTGGGGACTTCAGACATCAATGTCACACCACCTGCTTCCATCACAGACATACCGTGGGCGGTGATATCCATGTGTACATCTGGGGCTTGCTC-AA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73356719 143 - 125196307 CATGGCTCCTGGCAGCCAGCCCCACACCGCCAGTACCTGATGGGCAACCTTGGGGACTTCAGACATCAATGTCACACCACCTGCTTCCATCACAGACATACCGTGGGCGGTGATATCCATGTGTACATCTGGGGCTTGCTC-AA i papAnu2.chr9 M 1701 C 0 s chlSab2.chr9 72190275 143 - 125710982 CATGGCTCCTGGCAGCCAGCCCCACACCGCCAGTACCTGATGGGCAACCTTGGGGACTTCAGACATCAATGTCACACCACCTGCTTCCATCACAGACATACCGTGGGCGGTGATATCCATGTGTACATCTGGGGCTTGCTC-AA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75648662 143 - 121768101 CAGGGCTCCTGGCAGCCAGCCTGACACCACCAGTACCTGATGGGCAACCTTGGGAACTTCAGACATCAATGTCACACCACCTG-TTCAGTCACAGACATACCGTGGGCAGTGATATCCATGTGTACATCTGGGGCTTGCTCTAA i calJac3.chr12 C 0 C 0 s mm10.chr14 24238754 125 + 124902244 CAGGACT-AGAGCAGCCAGCCCTCCACAGCTGGTACCTGGTGGGTGACCTTGAAGACTTGAGACGCCAATGTCATGCCACCAGCTTCCATCACAGACATA---------GTGAGA--------CGCATCTGAGAGCTGCTC-AA i mm10.chr14 C 0 I 1524 s canFam3.chr4 27800431 143 + 88276631 CATGGCTCCTGGCAGCCAGCCCCAGCACACTGGTACCTGATGGATAACCTTGGGAACTTGGCACATCAATGTCACACCACCTGCTTCCGTTACAGACATACTGTGGGTGGTGACATCCGTGTGTGCATCTGGGACTCACTC-TA i canFam3.chr4 C 0 C 0 a score=2410182.000000 s hg38.chr10_KI270825v1_alt 158551 729 + 188315 GCCTTCCTCCTCTCCCACAGCCT-CTGCCACCATGAGGTCACCACTTAGGAATCTGCATGTATATTTGAAGATGATCTGGAC-----AAGGATACATCATTCACTCTACACACAGCTGACTattcattcgttcaacaaaaaattatcgaacacctatcttgtactaggctctattctggg---catgaggactata-------acagcaaaTTCAG---CTCAGGGAGGACAGCTCTGACACCTGCTTGGCATAGTATACAAGGAGCTCCCACAGAACCCTCAGAAACACCAGGAGATTCCCAGTTTTCTGGTTCTAAGGCTAGTTGCTGTCTACTACTGCCACTGTTG---TGCTATATTACT---CAGGGTAacaaaatgctcttccatttttcctaccatggattgtcaaatagcacagtgaagtagttagtgttttaattactttgtag---aggagataagctcagaaggg-ttaaaaaccttgctcaaggtctaaaaccttgtaagGTCTGATCATTACTACCTAGACCCACCATCCCACTCCAGCAATGACCGCCTGTGCTAACTGTATTATCGCACAAAGGTGGTAATGCTTGGAGTGGACATTCATCTGCTCTTTTACCTGCG-TGACATCGCTGCTGCTTGTCTTCCTTTAGACAACTGCTCTGCCTCCCTC----------TAAAAACCCACATAGTGTTGGAATGGGCTGCCAATCACAGTAGCCCATCa------ccttaccctggggttccactgctgggc s panTro4.chr10 76536697 729 + 133524379 GCCTTCCTCCTCTCCCACAGCCT-CTGCCACCATGAGGTCACCACTTAGGAATCTGCATGTATATTTGAAGAGGATCTGGAC-----AAGGATACATCATTCACTCTACACACAGCTGACTattcattcgttcaacaaaaaattatcgaacacctatcttgtactaggctctattctggg---catgaggactata-------acagcaaaTTCAG---CTCAGGGAGGACAGCTCTGACACCTGCTTGGCATAGTATACAAGGAGCTCCCACAGAACCCTCAGAAACACCAGGAGATTCCCAGTTTTCTGGCTCTAAGGCTAGTTGCTGTCTACTACTGCCACTGTTG---TGCTATATTACT---CAGGGTAacaaaatgctcttccatttttcctaccatggattgtcaaatagcacagtgaagtagttagtgttttaattactttgtag---aggagataagctcagaaggg-ttaaaaaccttgctcaaggtctaaaaccttgtaagGTCTGATCATTACTACCTAGACCCACCATCCCACTCCAGCAATGACCGCCTGTGCTAACTGTATTATCGCACAAAGGTGGTAATGCTTGGAGTGGACATTCATCTGCTCTTTTACCTGCG-TGACATCGCTGCTGCTTGTCTTCCTTTAGACAACTGCTCTGCTGCCCTC----------CAAAAACCCACATAGTGTTGGAATGGGCTGCCAATCACAGTAGCCCATCa------ccttaccctggggttccactgctgggc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76205456 739 - 133410057 GCCTTCCTCCTCTCCCACAGCCT-CTGCCACCATGAGGTCACCACTTAGGAATCTTCATGTATATTTGAAGAGGATATGGAC-----AAGGATACATCATTCACTCTATACACAGCTGACTattcattcgttcaacaaaaaattatcgaacacctatcttgtactaggctctattctgga---catgaagactata-------acagcaaaTTCGG---CTCAGGGAGGACAGCTCTGACACCTGCTTGGCGTAGTATACAAGGAGCTCCCACAGAACCCTCAGAAACACCAGGAGATTCCCAGTTTTCTGGCTCTAAGGCTAGTTGCTGTCTACTGCTGCCACTGTTGTGCTGCTATATTACT---CAGGGTAacaaaatgctcttccatttttcctaccatggattgtcaaatagcacagtgaggtagttagtgttttaattactttgtag---aggagaaaagctcagaagggtttaaaaaccttgctcaaggtctaaaaccttgtaagGTCTGATCATTACTACCTAGACCCACCATCCCACTCCAGCAATGACCGCCTGTGCTAACTGTATTATCGCACAAAGGTGGTAATGCTTGGAGTGGACATTCATCTGCTCTTTTACCTGCG-TGCCATCGCTGCTGCTTGTCTTCCTTTAGACAACTGCTCTGCCTCACTC----------TAAAAACCCACATAGTGTTGGAATGGGCTGCCAATCACAGTAGCCCATCACCTTACccttaccctgtggttccactgctgggc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35140879 729 + 104879549 GCCTTCCTCCTCTCCCACAGCCT-CTGCCACCATGAGGTCACCACTTAGGAATCTGCATGTGTATCTGAAGAGGATCTGGAC-----AAGGATACATCATTCACTGTACACACAGCTGACTattcattcgttcaacgaaaagttattgaacacctatcttgtactaggctctattctggg---catgaggactata-------acagcaaaTTCGG---CTCAGGGAGGACAGCTCTGACACCTGCTTGGCATAGTATACAAGGAGCTCCCACAGAACCCTCAGAAACAGGAGAAGACTCCCAGTTTTCTGGCTCTAAGGCTAGTTGCTGTCTACTACTGCCACTGTTG---TGCTATATTGCT---CAGGGTAacaaaatgctcttccatttttcctaccgtggattgtcaaatagcacagtgaagtagttagtgttttaattactttgtag---acgagataagctcggaaggc-ttaaaaaccttgctcaaggtctaaaaccttgtaagGTCTGATCATTACTACCTAGACCCACCATCCCACTCCAGCAATGACCGCCTGTGCTAACTGTATTATCACACAAAGGTGGCAATGCTTGGAGTGGACATTCATCTGCTCTTTTACCTGCG-TGACATCACTGCTGCTTGTCTTCCTTTAGACAATTGCTCTGCCTCACTC----------TAAAAACCCACACAGGGTTGGAATGGGCTGCCAATCACAGTAGCCCATCa------ccttaccctgtggttccactgctgggc i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73933481 727 - 130959383 GCCTTCCTCCTCTCCCACAGCCT-CTGCCACCATGAGGTCACCACTTAGGAATCTGTATGTATATTTGAAGAGGATCTGGAC-----AAGGATACATCATTCACTTTACACAGAGCTGACTattcattcgttcaacaaaaagttattgcacacccatcttgtaccaggctctattctggg---aatgaggactata-------atagcaaaTTTGG---TTCAGGGAGGACAGCTCTGACACCTGCTTGGCATAGTATACAAGGAGCTCCCACAGAA-CCTCAGAAACACCAGGAGATTCCCAGTTTTCTGGCTCTAAGGTTAGTTGCTGTCTACTACTCTCACTGTTG---TGCTATATTGCT---CAGGGTAacaaaatgctcttccacttttcttaccatggattgtcaaacagcacagtgaagtagttagtgttttcattactttgtag---aggagataagctcacaagga-ttaaaaaccttgctcaaggtctaaaaccttgtaaAGTCTGACCATCACTACCTAGACCCACCGTCCCACTCCAGCAATGACGGCGTGTGCTAACTGTATTATCGCACAAAGGTGGCAATGCTTGGAGTGGACGTTCATCTGCTCTTTTACCTGCG-CAACATCGCTCCTGCTTGTCTTCCTTTACACAACTGCTCTGCCTCACTA-----------AAAAACCCACATAGTATTGGAATGGGCTGCCAATCATAGTAGCCCATCa------tcttaccctgtggttccactgctgggc i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75494068 727 - 133195287 GCCTTCCTCCTCTCCCACAGCCT-CTGCCACCATGAGGTCACCACTTAGGAATCTGCATGTATATTTGAAGAGGATCTGGAC-----AAGGATACATCATTCACTTTACACACAGCTGACTattcattcgttcaacaaaaagttattgcacacccatcttgtaccaggctctattctggg---aatgaggactata-------atagcaaaTTTGG---TTCAGGGAGGACAGCTCTGACACCTGCTTGGCATAGTATACAAGGAGCTCCCACAGAA-CCTCAGAAACACCAGGAGATTCCCAGTTTTCTGGCTCTAAGGTTAGTTGCTGTCTACTACTCTCACTGTTG---TGCTATATTGCT---CAGGGTAacaaaatgctcttccacttttcttaccatggattgtcaaacagcacagtgaagtagttagtgttttcattactttgtag---aggagataagctcacaagga-ttaaaaaccttgctcaaggtctaaaaccttgtaaAGTCTGATCATCACTACCTAGACCCACCGTCCCACTCCAGCAATGACGGCGTGTGCTAACTGTATTATCGCACAAAGGTGGCAATGCTTGGAGTGGACATTCATCTGCTCTTTTACCTGCG-CAACATCGCTCCTGCTTGTCTTCCTTTACACAACTGCTCTGCCTCACTA-----------AAAAACCCACATAGTATTGGAATGGGCTGCCAATCATAGTAGCCCATCA------TCTTACCCTGTGGTTCCACTGCTGGGC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73356862 727 - 125196307 GCCTTCCTCCTCTCCCACAGCCT-CTGCCACCATGAGGTCACCACTTAGGAATCTGCATGTATATTTGAAGAGGATCTGGAC-----AAGGATACATCATTCACTTTACACACAGCTGACTATTCATTCGTTCAACAAAAAGTTATTGCACACCCATCTTGTACCAGGCTCTATTCTGGG---AATGAGGACTATA-------ATAGCAAATTTGG---TTCAGGGAGGACAGCTCTGACACCTGCTTGGCATAGTATACAAGGAGCTCCCACAGAA-CCTCAGAAACACCAGGAGATTCCCAGTTTTCTGGCTCTAAGGTTAGTTGCTGTCTACTACTGTCACTGTTG---TGCTATATTGCT---CAGGGTAACAAAATGCTCTTCCACTTTTCTTACCATAGATTGTCAAACAGCACAGTGAAGTAGTTAGTGTTTTCATTACTTTGTAG---AGGAGATAAGCTCACAAGGA-TTAAAAACCTTGCTCAAAGTCTAAAACCTTGTAAAGTCTGATCATCACTACCTAGACCCACCGTCCCACTCCAGCAATGACGGCGTGTGCTAACTGTATTATCGCACAAAGGTGGCAATGCTTGGAGTGGACATTCATCTGCTCTTTTACCTGCG-CAACATCGCTCCTGCTTGTCTTCCTTTACACAACTGCTCTGCCTCACTA-----------AAAAACCCACATAGTATTGGAATGGGCTGCCAATCATAGTAGCCCATCA------TCTTACCCTGTGGTTCCACTGCTGGGC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72190418 723 - 125710982 GCCTTCCTCCTCTCCCACAGCCT-CTGCCACCATGAGGTCACCACTTAGGAATCTGCATGTATATTTGAAGAGGATCTGGAC-----AAGGATACATCATTCACTTTACACACAGCTGAC----cattcgttcaacaaaaagttattgcacacccatcttgtaccaggctctattctggg---aatgaggactata-------atagcaaaTTTGG---TTCAGGGAGGACAGCTCTGACACCTGCTTGGCATAGTATACAAGGAGCTCCCACAGAA-CCTCAGAAACACCAGGAGATTCCCAGTTTTCTGGCTCTAAGGCTAGTTGCTGTCTACTACTGTCACTGTTG---TGCTATATTGCT---cagtgtaacaaaatgctcttccatttttcttaccatggattgtcaaacagcacagcgaagtagttagtgttttaatcactttgtag---aggagataagctcagaagga-ttaaaaaccttgctcaaggtcTAAAACTTTGTAAAGTCTGATCATCACTACCTAGACCCACCATCCCACTCCAGCAATGACCGCGTGTGCTAACTGTATTATCGCACAAAGGTGGCAATGCTTGGAGTGGACATTCATCTGCTCTTTTACCTGCG-CAACATCGCTCCTGCTTGTCTTCCTTTAGACAACTGCTCTGCCTCACTA-----------AAAAACCCACATAGTATTGGAATGGGCTGCCAATCACAGCAGCCCATCa------tcttaccctgtggtttcactgctgggc i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75648805 719 - 121768101 GCCTTCCTCCTCTCCCACAGCCT-CTGCAACCATGAGGTCACCACTTAGGAATCTGCATGTATATTTGAAGAGGATCTGGAC-----AAGGACATATCATTCACTCTACACACAGCT----attcattcgctcaacaaaatgttactgaacacctatcttgtaccactctctattctggg---catgagaactgta-------acagcaaaTTTGG---CTCAGGAAGGACAGGTCTGACACCTGCTTGGCATAGTGTATAAGGAACTCCCATAGAACCCTCAGAAACATCAGGAGATTCCCAGTTTTCTGGTTCTAAGCCTAGCTGCCATCTACTACTGCCACTGTCA---TGATATACCGCT---CATTAGAACAAAATGCTCTTCCATTTTTCTTACCATGGATTGTCAAATAACACAGTGAAGTGGTCATGCTTTTAATTACTTTGTAG---AGGAGATAAGCTCAGAAGAG-TTAAAATCCTTGC------TCTAAAACCTTGTAAGGTCTGATCATCACTACCTAGACCCACCATCCCACTCCAGCAATGACCTCCTGTGCTACCTGTATGACAGCACAAAGGTTGCAATGCTTGGAGTGGACATTCATCTGCTGTTTTACCTCTG-CAACATTGCTCCTGCTTGTCTTCCTGTAGATAACTGCTCTGTTTCACTC----------TAAAAACCCACGTGGTACTGGAATGGGCTACCAATCACAGTATCCCATCa------ctttaccctgtggttccactgttgggc i calJac3.chr12 C 0 C 0 s canFam3.chr4 27800574 715 + 88276631 GCCTTCCCACACTCCCACAACCTCCTGTCACTGTGAAGTCACCACTTAGGA------ACATATTTCTGAAGAGAATCTGGACTTACACGGGACACACCACTCATTCTACACATAGTGGACAAGtcatccattcaacagaaacttactgaacacctatcttgggccaggctcCAACAGTGAATTCATGGAGATTATATTTTACTCTAGGTGACCCAGGGCCACAAGAACAGTAGCCCTAACATCTGTTCAGCGTAGTTTCCAAGGAGCCCTGACATAACCCTCAGAAATATCAGGAGAATCCCAGGTTCCTAGTGAGAGGGCCGGTTG--------------------GA---TGCTGCGTTGCTCACCACAGTAACAAAATACTTCTCC----Ctcttactactgattgtcaaatagcacagtcaagtagttactgtcatagctactatgcagagtagaagataagctcagaaggc-ttaacttcctcgctcaaagtctaaaacttggtaaaggatgagc-------cCGTGTCCTACCACCCCACTCCAGTAAGGACTTGGTTTGCAAACTG-AGCATCACACAAAGATGGGACCACATCTAGTGGACACT-GCTTGCTGTTTTAGCTGCACCAACATCCTTTCTGCTCACCATGCTTTGGAGAACGGCTC--CCTCACCCCACCCCCACCTCAAGAACCATATGACACTGT-CCAGGCTGCCAGCCACAGCATCCCATCA------CCTTACCCT--------ATTCATGGGG i canFam3.chr4 C 0 C 0 e mm10.chr14 24238879 1524 + 124902244 I a score=492119.000000 s hg38.chr10_KI270825v1_alt 159280 136 + 188315 acagtgccaaagctgagccagtcttagtcctctagccctggccacagtgaccgggcctcatgtggacacataacactggccagaccaatcagaatcctaccatgaggtttgtctgcctgggctgattggatagagc s panTro4.chr10 76537426 136 + 133524379 acagtgccaaagctgagccagtcttagtcctctagccctggccacagtgaccgggcctcatgtggacacataacactggccagaccaatcagaatcctaccatgaggtttgtctgcctgggctgattggatagagc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76206195 136 - 133410057 acagtgccaaagctgagccagtcttcgtcctctagccctggccacagtgaccgggcctcatgtggacacataacgctggccagaccaatcagaatcCTACCATGAGGTTTGTCTGCCTGGGCTGATTGGATAGAGC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35141608 136 + 104879549 acagtgccaaagctgagccagtcttagtcctctagccctggccacagtgaccgggcctcatgtggacacataacactggccagaccaatcagaatcctaccatgaggtttgtctgcctgggctgattggatagagc i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73934208 132 - 130959383 acagggccaaagctgagccagtcttagtcctctagccctggccacagtcaccgggactcacacagacacataacgctggccagaccaatcagaatcctcccatgaggtt----ttcctgggctgactggatagagc i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75494795 132 - 133195287 ACAGGGCCAAAGCTGAGCCAGTCTTAGTCCTCTAGCCCTGGCCACAGTCACCGGGACTCACACAGACACATAACGCTGGCCAGACCAATCAGAATCCTCCCATGAGGTT----TTCCTGGGCTGACTGGATAGAGC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73357589 132 - 125196307 ACAGGGCCAAAGCTGAGCCAGTCTTAGTCCTCTAGCCCTGGCCACAGTCACCGGGACTCACACAGACACATAACGCTGGCCAGACCAATCAGAATCCTCCCATGAGGTT----TCCCTGGGCTGACTAGATAGAGC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72191141 132 - 125710982 acagggccaaagctgagccagtcttagtcctctagccctggccacagtcaccaggcctcacgcagacacgtaacgctggccagaccaatcagaatcctcccatgaggtt----ttcctgggctgattagatagagc i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75649524 136 - 121768101 acagggccaaagctgagccagccttagtcctccagtcctggccacagtgattgggcctcacatagacacataacactggtcagaccaatcagaatcctcccatgaggtctttctgcctgggctgactggatagagc i calJac3.chr12 C 0 C 0 s mm10.chr14 24240403 134 + 124902244 ATGGGGACAAAGCCAAACCAACCTTAGCCTTCTAACCTCAGCTACAGCCACTCTGCCTCAAATGGGTGCACAGCCC--ATCAAGACAATCAGAATCCTTCCAGAAGATTTTTCTGCCGGGTCTGACTGGCTAGAGC i mm10.chr14 I 1524 C 0 s canFam3.chr4 27801289 129 + 88276631 -----TCAATTGCTGAGACAATCTCAGTCCTTTAGcccttgccacagtggttgggcctgatgtggacaca-gactcaagtcaagcgaagcagagatctgccctgggaTC-TCCCCCCTGGGCTCATTAAATGGAGC i canFam3.chr4 C 0 I 178 a score=542355.000000 s hg38.chr10_KI270825v1_alt 159416 146 + 188315 tccctttcttccctggtcaggggctgtgaacctgaa---cagaggggcctgaggtcatgtt-cagacccgtgggaaaagccCACAGCATCGATCCAAGAGGTCAAACGTCCCAAAGGCCAGTTT-------CCACCATCCATCCAAAGGTTGTGGAA s panTro4.chr10 76537562 146 + 133524379 tccctttcTTCCCTGGTCAGGGGCTGTGAACATGAA---CAGAGGGGCCTGAGGTCATGTT-CAGACCCGTGGGAAAAGCCCACAGCATCGATCCAAGAGGTCAAACGTCCCAAAGGCCAGTTT-------CCACCATCCATCCAAAGGTTGTGGAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76206331 146 - 133410057 TCCCTCTCTTCCCTGGTCAGGGGCTGTGAACATGAA---CAGAGGGGCCTGAGGTCATGTT-CAGACCCGTGGGAAAAGCCCACAGCATTGATCCAAGAGGTCAAACGTCCCAAAGGCCAGTTT-------CCACCATCCATCCAAAGGTTGTGGAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35141744 146 + 104879549 tccctttcTTCCCTGGTCAGGGGCTGTGAACATGAA---CAGAGGGGCCTGAGGTCATGTT-CAGACCCATGGGAAAAGCCCACAGCATCGATCCAAGCGGTCAAACGTCCCAAAGGCCAGTTT-------CCACCATCCATCCAAAGGTTGTGGAA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73934340 146 - 130959383 tccctttcTTCCCTGGTCAGGGGCTGTGAACACGAA---CAGAGGGGCCTGAAGTCATGTT-CAGACCCGTGGGAAAAGCCCACAGCATCGATCCAAGAGGTCAAATGTCCCAAAGGCCAGTTT-------CCACCATCCATCCAAAGGTTGTGGAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75494927 146 - 133195287 TCCCTTTCTTCCCTGGTCAGGGGCTGTGAACACGAA---CAGAGGGGCCTGAAGTCATGTT-CAGACCCGTGGGAAAAGCCCACAGCATCGATCCAAGAGGTCAAATGTCCCAAAGGCCAGTTT-------CCACCATCCATCCAAAGGTTGTGGAA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73357721 146 - 125196307 TCCCTTTCTTCCCTGGTCAGGGGCTGTGAACACGAA---CAGAGGGGCCTGAAGTCATGTT-CAGACCCGTGGGAAAAGCCCATAGCATCGATCCAAGAGGTCAAATGTCCCAAAGGCCAGTTT-------CCACCATCCATGCAAAGGTTGTGGAA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72191273 146 - 125710982 tccctttcTTCCCTGGTCAGGGGCTGTGAACACGAA---CAGAGGGGCCTGAAGTCATGTT-CAGACCCGTGGGAAAAGCCCACAGCATCGATCCAAGAGGTCAAATGTCCCAAAGGCCAGTTT-------CCACCATCCATCCAAAGGTTGTGGAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75649660 154 - 121768101 tccctttcttctCTGGTCAGGGGCTGTCAACACAAA---CAGAGGGAACTGAGACCATGTTCCAGACCCGTGGGAAAAGCCCACAGCATCGATCCAAGAGGTCAAGCGTCCCAAAGGCCAGTTTCCACCACCCACCATCCATCCAAAGGTTGTGGAA i calJac3.chr12 C 0 C 0 s mm10.chr14 24240537 111 + 124902244 TGCCTTCCTTCCCTGCCCAGGGCCAGTTAACTTCAAGCCCACAGAGACCCGAGGCTA-----C---------GGAAAAGCTCACA----CGATTCAGGAGG----------CAAGGGTCA---T---------------CATGCTAAGGTTTTAGAA i mm10.chr14 C 0 I 136 s canFam3.chr4 27801596 138 + 88276631 TCCCTTTATTCTCTGGCCAGGGACCATGAAGATGAAGTCCATAAGGTCCTGAGGCCATGCT-C-----CATGGAAAAAGCCCACAGCATTCA-----GGGATCAATCATC-CAAAGGCCGGGTT-------CTCCCATCCACCCCAAGCTTTTGGAA i canFam3.chr4 I 178 C 0 a score=541766.000000 s hg38.chr10_KI270825v1_alt 159562 154 + 188315 TATTCTAAGTCAATACATTTCTCTTTTTCTACCTAAGATGATCTGAGCTAAGTTTCTGTCATTTTGCAATAAAGGTACCCTGAAATGATAC----------ACAGATAAAATCTGCCCTTCACT-------TAAAAACCTCTTCTCAACCATTAATTTCAAATGACTCTGC s panTro4.chr10 76537708 154 + 133524379 TATTCTAAGTCAATACATTTCTCTTTTTCTACCTAAGATGATCTGAGCTAAGTTTCTGTCATTTTGCAATAAAGGTACCCTGAAATGATAC----------ACAGATAAAATCTGCCCTTTACT-------TAAAAACCTCTTCTCAACCATTAATTTCAAATGACTCTGC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76206477 154 - 133410057 TATTCTAAGTCAATACATTTCTCTTTTTCTACCTAAGATGATCTGAGCTAAGTTTCTGTCATTTTGTTATAAAGGTACCCTGAAATGATAC----------ACAGATAAAATCTGCCTTTCACT-------TAAAAACCTCTTCTCAACCATTAATTTCAAATGCCTCTGC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35141890 141 + 104879549 TATTCCAAGTCAATACATTTCTCTTTTTCTACCTAAGATGAT-----CTAAGTTTCTGTCATTTTGCAATAAAGGTACCCTGAAATGATAC----------ACAGATAAAATCTGCCCTTCACT---------------TCTTCTCAACCATTAATTTCAAACGCCTCTGC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73934486 152 - 130959383 TATTCTAAGTCAATACATTTCTCTTTTTCTACCTAAGATGGTCTGAGCTAAGTTTCTATCATTTTGCAATAAAGGTACCCTGAAATGAT------------ACAGATAAAATCTGCCCTTCACT-------TAGAAATCTCTTCTCACCCATTAATTTCAAATGCCTCTGC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75495073 152 - 133195287 TATTCTAAGTCAATACATTTCTCTTTTTCTACCTAAGATGGTCTGAGCTAAGTTTCTATCATTTTGCAATAAAGGTACCCTGAAATGAT------------ACAGATAAAATCTGCCCTTCACT-------TAGAAATCTCTTCTCACCCATTAATTTCAAATGCCTCTGC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73357867 152 - 125196307 TATTCTAAGtcaatatatttctctttttctacctaAGATGGTCTGAGCTAAGTTTCTATCATTTTGCAATAAAGGTTCCCTGAAATGAT------------ACAGATAAAATCTGCGCTTCACT-------TAGAAATCTCTTCTCACCCATTAATTTCAAATGCCTCTGC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72191419 152 - 125710982 TATTCTAAGTCAATACATTTCTCTTTTTCTACCTAAGATGGTCTGAACTAAGTTTCTATCATTTTGCAATAAAGGTACCCTGAAATGAT------------ACAGATAAAATCTGTCCTTCACT-------TAGAAATATCTTCTCACCCATTAATTTCAAATGCCTTTGC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75649814 154 - 121768101 TAGTCtaagtcaatacatttctctttttctgcctaagatggtctgagctaagtttctgtcattttgcaataaaggtgccctgaaatgatac----------aCAGATAAAATCTGCCCTTCACT-------TAGAAACCTCTTCTCAACCATTAATTTCAAATGCTTCCTC i calJac3.chr12 C 0 C 0 s mm10.chr14 24240784 143 + 124902244 TATTATATATCAATAAGTTGTCCTTTT--TGCCTAAGATGGTTTGAGCTAGGT---TGTCAT-----------GGTGTCCTGAACAGAG------------AGAATTACGACCTGCCCCCCCCTCCCCCGTTAGAAACCTCTCTGCAACCACGGTCTTCAGGTTCCTCTGC i mm10.chr14 I 136 I 16 s canFam3.chr4 27801734 159 + 88276631 TACTATA---Taataaattcctccttt-ctgcctactacactttgagctaagtttccatcac-ttgcaataaaggtgccctgaactaatacaCGTAGAGGGATAAATAAAATCTGCCCTTCTCT-------TAGAAACTTTTTTTTAACCATTACTTGCAAGTGTCTCCAT i canFam3.chr4 C 0 C 0 a score=68782.000000 s hg38.chr10_KI270825v1_alt 159716 18 + 188315 CACTTCCTCTTAAATAAC s panTro4.chr10 76537862 18 + 133524379 CACTTCCTCTTAAATAAC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76206631 18 - 133410057 CACTTCCTCTCAAATAAC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35142031 18 + 104879549 CACTTCCTCTCAAATAAC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73934638 18 - 130959383 CACTTCCTCTCAAGTAAC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75495225 18 - 133195287 CACTTCCTCTCAAGTAAC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73358019 18 - 125196307 CACTTCCTCTCAAGTAAC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72191571 18 - 125710982 CACTTCCTCTCAAATAAC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75649968 18 - 121768101 CACTTCCTCTCAAATAAC i calJac3.chr12 C 0 C 0 s canFam3.chr4 27801893 18 + 88276631 GGCTTCCTCTCAAATAAC i canFam3.chr4 C 0 C 0 e mm10.chr14 24240927 16 + 124902244 I a score=455966.000000 s hg38.chr10_KI270825v1_alt 159734 153 + 188315 ACAATTaaaaccacctaaattagccatgcagggtggcatgcgcctgtaatcttagctactaaggaggctgaggcaggaggatggcttgagcccaggagtttgaggctgcagtgagctatgattgcaccactgcactccactgtctctaaaaaa s panTro4.chr10 76537880 153 + 133524379 ACAATTAAAACCACCTaaattagccatgcagggtggcatgcgcctgtaatctcagctactaaggaggctgaggcaggaggatggcttgagcccaggagtttgaggctgcagtgagctatgattgcaccactgcactccaCTGTCTCTAAAAAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76206649 153 - 133410057 ACAATTAAAACAACCTaaattagccatgcagggtggcatgcgcctgtaatctcagctactaaggaggctgaggcaggaggatggcttgagcgcaggagtttgaggctgcagtgagctatgattgcaccactgcactccaCTGTCTCTAAAAAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35142049 153 + 104879549 ACAATTAAAACAACCTaaattagccacgcaggggggcatgtgcctataatctcagctactaaggaggctgaggcaggaggatggcttgagccaaggagtttgaggctgcagtgagctatgattgcaccactgcactccaCTGTCTCTAAAAAA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73934656 149 - 130959383 AC----AAAACAACCTAAATTAgccatgcagggtggcgtgtacctgtaatctcagctgctaaggaggctgaggcaggaggatggcttgagctcaggagtttgaggctgcagtgagctatgattgcaccactgcactccaCTGTGTCTAAAAAA i rheMac3.chr9 C 0 I 1 s macFas5.chr9 75495243 149 - 133195287 ac----aaaacaacctaaattagccatgcagggtggcgtgtacctgtaatctcagctgctaaggaggctgaggcaggaggatggcttgagctcaggagtttgaggctgcagtgagctatgattgcaccactgcactccactgtgtctaaaaaa i macFas5.chr9 C 0 I 1 s papAnu2.chr9 73358037 149 - 125196307 AC----AAAACCACCTAAATTAGCCATGCagggtggcgtgtacctgtaatctcagctgctaaggaggctgaggcaggaggatggcttgagctcaggagtttgaggctgcagtgagctatgattgcaccactgcactccactgtgtctaaaaaa i papAnu2.chr9 C 0 I 317 s chlSab2.chr9 72191589 149 - 125710982 ac----aaaacaacctaaattagccatgcaggctggcatgcacctgtaatctcagctactaaggaggctgaggcaggaggatggcttgagctcaggagtttgaggctgcagtgagctatgattgcaccactgcactccaCTGTGTCTAAGAAA i chlSab2.chr9 C 0 I 2 s calJac3.chr12 75649986 153 - 121768101 ACAATTAGAACAACCAGAATTAGCCACGGAGggtggcatgcacctgtaatctcagctactaaggaggctgaggcaagaggatgccttcagcccaggaatctgaggccacactgagctatggttgcaccactgcactccaCTATCTCTAAAAAA i calJac3.chr12 C 0 C 0 e canFam3.chr4 27801911 0 + 88276631 C e mm10.chr14 24240927 16 + 124902244 I a score=31224.000000 s hg38.chr10_KI270825v1_alt 159887 11 + 188315 taagtaaataa s panTro4.chr10 76538033 11 + 133524379 TAAGTAAATAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76206802 11 - 133410057 TAAGTAAATAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35142202 9 + 104879549 TAAGTAAAT-- i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73934806 11 - 130959383 TAAGTAAATAA i rheMac3.chr9 I 1 C 0 s macFas5.chr9 75495393 11 - 133195287 taagtaaataa i macFas5.chr9 I 1 C 0 s papAnu2.chr9 73358503 11 - 125196307 taagtaaataa i papAnu2.chr9 I 317 C 0 s chlSab2.chr9 72191740 11 - 125710982 TAAGTAAATAA i chlSab2.chr9 I 2 C 0 s calJac3.chr12 75650139 11 - 121768101 TAAGTAAATAA i calJac3.chr12 C 0 C 0 e canFam3.chr4 27801911 0 + 88276631 C e mm10.chr14 24240927 16 + 124902244 I a score=51012.000000 s hg38.chr10_KI270825v1_alt 159898 13 + 188315 acaaacaaaagaa s panTro4.chr10 76538044 13 + 133524379 ACAAACAAAAGAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76206813 13 - 133410057 ACAAACAAAAGAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35142211 11 + 104879549 --AAACAAAAGAA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73934817 13 - 130959383 ACAAACAAAAGAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75495404 13 - 133195287 acaaacaaaagaa i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73358514 13 - 125196307 acaaacaaaagaa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72191751 13 - 125710982 ACAAACAAAAGAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75650150 13 - 121768101 ACAAACAAAAGAA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27801911 13 + 88276631 ACAAATAAAAGAA i canFam3.chr4 C 0 C 0 e mm10.chr14 24240927 16 + 124902244 I a score=13475.000000 s hg38.chr10_KI270825v1_alt 159911 3 + 188315 cca s panTro4.chr10 76538057 3 + 133524379 CCA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76206826 3 - 133410057 CCA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35142222 3 + 104879549 CCA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73934830 3 - 130959383 CCA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75495417 3 - 133195287 CCA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73358527 3 - 125196307 cca i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72191764 3 - 125710982 CCA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75650163 3 - 121768101 CCA i calJac3.chr12 C 0 I 610 s mm10.chr14 24240943 3 + 124902244 CTG i mm10.chr14 I 16 C 0 s canFam3.chr4 27801924 3 + 88276631 CCA i canFam3.chr4 C 0 C 0 a score=876901.000000 s hg38.chr10_KI270825v1_alt 159914 221 + 188315 aaagaaaaaCCACAACAGCTGGAGCTTTT-ACTTATGTCCCTTGCCCTGCTGACCCTCCAGGGCAGAGGGGATGAAGAAAAGGTGGCTGGTACCCGAAGGAAGTGGAGAGAGAACAAAAGGCC-AGGCAACCTCTGCTGAATAATAAATAACCCACACCTGACAATCAGCACCCATCTGCATTAGTCCCACTAGAAAAGCCTGGCAGGGTTATTCCCTTGGGG s panTro4.chr10 76538060 222 + 133524379 AAAGAAAAACTACAACAGCTGGAGCTTTT-ACTTATGTCCCTTGCCCTGCTGACCCTCCAGGGCAGAGGGGATGAAGAAAAGGTGGCTGGTACCCGAAGGAAGTAGAGAGAGAACAAAAGGCCCAGGCAACCTCTGCTGAATAATAAATAACCCACACCTGACAATCAGCACCCATCTGCATTAGTCCCACTAGAAAAGCCTGGCAGGGTTATTCCCTTGGGG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76206829 222 - 133410057 AAAGAAAAACTACAACAGCTGGAGCTTTT-ACTTATGTCCCTTGCCCTGCTGACCCTCCAGGGCAGAGGGGATGAAGAAAAGGTGGCTGGTACTCAAAGGAAGTAGAGAGAGAACAAAAGGCCCAGGCAACCTCTACTGAATAATAAATAACCCTCACCTGACAATCAGCACCCAACTGCATTAGTCCCACTGGAAAAGCCTGGCAGGGTTATTCCCTTGGGG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35142225 223 + 104879549 AAAGAAAAACTACAACAGCTGGAGCTTTTAACTTATGTCCCTTGCCCTGCTGACCCTCCAGGGCAGAGGGGATAAAGAAAAGGTGGCTGGTACCCAAAGGAAGTAGAGAGAGAACAAAATGCCCAGGTAACCTCCACTGAATAATAAATAACCCACACCTGACAATCGGCACCCAACTGCACTAGTCCCAGTGGAAAAGCCTGGCAGGGTTATTCCCTTGGGG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73934833 222 - 130959383 AAAGAAAAACTACAACAGCTGGAGCTTTT-ACTTATATCCCTTGCCCTGCTGACCCTCCAGGGTAGAGGGGATGAAGAAAAGGTGGCTGGTACCTGAAGGAAGTAGAGAGAGAACAAAAGGCCCAGGCAACCTCTACTGAATAATAAATAACCTACACCTGACAATCAGCACCCAACTGCACTAGTCCCACTGGAAAAGCCTGGCAGGGTTATTTCCTTGGGA i rheMac3.chr9 C 0 I 7 s macFas5.chr9 75495420 222 - 133195287 AAAGAAAAACTACAACAGCTGGAGCTTTT-ACTTATATCCCTTGCCCTGCTGACCCTCCAGGGTAGAGGGGATGAAGAAAAGGTGGCTGGTACCTGAAGGAAGTAGAGAGAGAACAAAAGGCCCAGGCAACCTCTACTGAATAATAAATAACCTACACCTGACAATCAGCACCCAACTGCACTAGTCCCACTGGAAAAGCCTGGCAGGGTTATTTCCTTGGGA i macFas5.chr9 C 0 I 6 s papAnu2.chr9 73358530 222 - 125196307 aaagaaaaactacaacaGCTGGAGCTTTT-ACTTATATCCCTTGCCCTGCTGACCCTCCAGGGTAGAGGGGATGAAGAAAAGGTGTCTGGTACCTGAAGGAAGTAGAGAGAGAACAAAAGGCCCAGGCAACCTCTACTGAATAATAAATAACCTACACCTGACAATCAGCACCCAACTGCACTAGTCCCACTGGAAAAGCCTGGCAGGGTTATTtccttggga i papAnu2.chr9 C 0 I 605 s chlSab2.chr9 72191767 222 - 125710982 AAAGAAAAACTACAACAGCTGGAGCTTTT-ACTTATATCCCTTGCCCTGCTGACCCTCCAGGGCAGAGGGGATGAAGAAAAGGTGGCTGGTACCTGAAGGAAGTAGAGAGAGAACAAAAGGCCCAGGCAACCTCTACTGAATAATAAATAACCTACACCTGACAATCAGCACCCACCTGCACTAGTCCCACTGGAAAAGCCTGGCAGGGTTATTTCCTTGGGG i chlSab2.chr9 C 0 I 7 s calJac3.chr12 75650776 221 - 121768101 aaagaaaaaCTACAACAGTTGAAGCTTTT-ACTTATGTCCCTTGCCCTGCTGACCCTCCAGGGCAGAGGGGATGAAGAAAAGGTGGTTGGTATCCTAAGGAAGTAGAGAGAGAACAAAAGGCCCAGGCAGCCTCTACTGAATAATAGATAACCC-CACCTGACAATCAGCAGCCACCTGCGCTAGTCCCACTGGAAAAGCCTGACAGGGTTATCCACTTGGGG i calJac3.chr12 I 610 C 0 s mm10.chr14 24240946 206 + 124902244 AGAGACAA---ATGTTGGCTTGAGCTGT--ACTTATGTCTCTTAACCTACTGATCC-CCAGGGCAGAGTACACCAAGCAAAAATAGCTGGTGCCCAAAGGCAGC--AGAGGAAACAAAAGACCCTGGCAGTCACCAGGGAATAATAAATACCCAACACCTGGCAGCACAGGGCCACCCGCACTA---------GAAGAGCCTGGCAGGGTTGTTCCCTTTTAA i mm10.chr14 C 0 I 3 s canFam3.chr4 27801927 215 + 88276631 GAAGAAAAACTACAATGGCTGGAAATTTT-ACTCATGTCCCTGTCCCTGCTGACCCTCCAGGCTGGAGTAGACAAAGATGATGTAGCTGGTACCTAAAGAGAGT----AGAGAACAAAGGGAC-AGGCAACCTCCAATGAATAATAAATAATCCACACCTGACAATCAGCAGCCAACTGTACTCATCCTGCTGGAAAAGCCTGGTA-GGTTATTCCTTAAAA- i canFam3.chr4 C 0 C 0 a score=39865.000000 s hg38.chr10_KI270825v1_alt 160135 12 + 188315 AAA-AAAAACAAA- s panTro4.chr10 76538282 12 + 133524379 AAA-AAAAACAAA- i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76207051 12 - 133410057 AAA-AAAAACAAA- i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35142448 13 + 104879549 AAATAAAAACAAA- i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73935062 12 - 130959383 AAA-AAAAAAAAA- i rheMac3.chr9 I 7 C 0 s macFas5.chr9 75495648 12 - 133195287 aaa-aaaaaaaaa- i macFas5.chr9 I 6 C 0 s papAnu2.chr9 73359357 12 - 125196307 aaa-aaaaaaaaa- i papAnu2.chr9 I 605 C 0 s chlSab2.chr9 72191996 12 - 125710982 AAA-AAAAAAAAA- i chlSab2.chr9 I 7 C 0 s calJac3.chr12 75650997 12 - 121768101 AAA-AAAAACAAA- i calJac3.chr12 C 0 C 0 s mm10.chr14 24241155 12 + 124902244 AAA-AGAGAGAAA- i mm10.chr14 I 3 I 768 s canFam3.chr4 27802142 12 + 88276631 -AA-AAAAAAAAGT i canFam3.chr4 C 0 C 0 a score=716055.000000 s hg38.chr10_KI270825v1_alt 160147 238 + 188315 CTTCCAGCTCTAATTTCTGAC-AGTGTACAATGCCTAAATT------------CAAACCTCCCACTCAGCCTAGCCATTAAGGTCCTCCAGATTACCTCTGCATCCCCAATTCCCTTCCACCCAGAGCCAAGGCCAAACCCCTGCTCTGCTCAGGCTGGGTAAACACATGGCTCCTCTCTATGGCTCAGCCTGTGCGGTCCAGCCTACGCAGCCCACACGTCCTCCCTCCATGGCTCCATGCATTCA-GAGC s panTro4.chr10 76538294 238 + 133524379 CTTCCAGCTCTAACTTCTGAC-AGTGTACAATGCCTAAATT------------CAAACCTCCCACTCAGCCTAGCCATTAAGGTCCTCCAGATTACCTCTGCATCCCCAATTCCCTTCCACCCAGAGCCAAGGCCAATCCCCTGCTCTGCTCAGGCTGGGTAAACACATGGCTCCTCTCTATGGCTCAGCCTGTGCGGTCCAGCCTACGCGGCCCACATGTCCTCCCTCCATGGCTCCATGCATTCA-GAGC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76207063 238 - 133410057 CTTCCAGCTCTAACTTCTGAC-AGTGTACAATGCCTAAATT------------CAAACCTCCCACTCAGCCTAGCCATCAAGGTCCTCCAGATTACCTCTGCATCCCCAATTCCCTTCCACCCAGAGCCAAGGCCAATCCCCTGCTCTGCTCAGGCTGGGTAAACACATGGCTCCTCTCTACAGCTCAGCCTCTGCGGCCCAGCCTCCGCGGCCCACACGTCCTCCCTCCATCGCTCCATGCATTCA-GAGC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35142461 238 + 104879549 CTTCCAGCTCTAACTTCTGAC-AGTGTACAATGCCTAAATT------------CAAACCCCCCACTCAGCCTAGCTATCAAGGTCCTCCAGATTACCTCTGCATCCCCAGTTCCCTTCCACCCAGAGCCAAGGCCAATCCCCTGCTCTGCTCAGGCTGGGTAAACACATGGCTCCTCTCTACGGCTCAGCCTCTGCGGCCCAGCATCTACGGCCCACAAGTCCTCCCTCCATCCCTCCATGCATTCA-GAGC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73935074 223 - 130959383 CTTCCAGCTCTAACTTCTGAC-AGTGTACAATGCCTAAATT------------CAAACCCCTC-CTCAGCCTAGCCATCAAGGTCCTCCAGATTACCTCTGCATCCCCATCTCCGTTCCACCCAGAGCCAAGGCCAATGCCCTGCTCTGCTCAGGCTGGGTAAACACACGGCTCCTCTCTACAGCTCAGCCTCTGCT--------------GCCCACACGTCCTCCCTCCATCCCTCCAGGCATTCA-GAGC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75495660 223 - 133195287 CTTCCAGCTCTAACTTCTGAC-AGTGTACAATGCCTAAATT------------CAAACCCCTC-CTCAGCCTAGCCATCAAGGTCCTCCAGATTACCTCTGCATCCCCATCTCCATTCCACCCAGAGCCAAGGCCAATGCCCTGCTCTGCTCAGGCTGGGTAAACACACGGCTCCTCTCTACAGCTCAGCCTCTGCT--------------GCCCACACGTCCTCCCTCCATCCCTCCAGGCATTCA-GAGC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73359369 223 - 125196307 cttccagcTCTAACTTCTGAC-AGTGTACAATGCCTAAATT------------CAAAcccccc-cTCAGCCTAGCCATCAAGGTCCTCCAGATTACCTCTGCATCCCCATCTCCGTTCCACCCAGAGCCAAGGCCAATGCCCTGCTCTGCTCAGGCTGGGTAAACACACGGCTCCTCTCTACAGCTCAGCCTCTGCT--------------GCCCACAcgtcctccctccatccctccaggcATTCA-GAGC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72192008 224 - 125710982 CTTCCAGCTCTAACTTCTGAT-AGTGTACAATGCCTAAATT------------CAAACCCCCCACTCAGCCTAGCCATCAAGGTCCTCCAGATTACCTCTGCATCCCCATCTCCCTTCCACCCAGAGCCAAGGCCAATGCCCTGCTCTGCTCAGGCTGGGTAAACACACAGCTCCTCTCTACAGCTCAGCCTCTGCT--------------GCCCACACGTCCTCCCTCCATCCCTCCAGGCATTCA-GAGC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75651009 223 - 121768101 CTCCCAACTCTAACTTCTGAC-AGTGTACAATGCCTAAATT------------CAAACCCCCA-CTCAGCCTAGCCATCATGGTCCTCCAGATTACCTCTGCATCCCCATCTCCCTTCCACCCAGAGCCAAGGCCAATCCCCTGCCCTGCTCAGGCTGGGTAAACACATAGCTCCTCTCTACCACTCATCCTCTGCT--------------GCCCACATGTCCTCCCTCCATCCCGCCAGGCACTCA-GAGC i calJac3.chr12 C 0 C 0 s canFam3.chr4 27802154 201 + 88276631 CTTCCAGCTTTAACTTGTGACAAGTGGACAGTGTCCCCATTGCCAGTGCCTCCCAACGCCCTCGCTCAGCCTAGCCATCATGGTCACTCCAGCAAACTTTGCA----------------ACCCGGAGCCCATGCCAACG-CCTGCTCTGCTCACACTGG-----------TCTCATTTCTGCAACCCGA----------------------ACCAGAATGTCCTCCTCCTTTGCCTGTGCACATTCACGCG- i canFam3.chr4 C 0 C 0 e mm10.chr14 24241167 768 + 124902244 I a score=2013853.000000 s hg38.chr10_KI270825v1_alt 160385 629 + 188315 TTCACTTCAACACCAAGT---CCCAGCACATTCGTGAAGCTCTCCTCGGCTTCTCCAGCGGACGCTGCTGGCTCCATTCTCTTAAGTTTGATGA-AG-CAAGCCAGCCAGTTCACTAGGAAAGTAAAGAGGAGGCACAGGAGGTGT--GGGGAGTGGGAACGAGAAGGAAACATCAGGCAA-TGAGCACGCGAGAGGTCCAGC----------CAAGTTCTGCCATTTCTGCCTCCCAATagaggcctggtg-gga-atgacttgag---gagtccc--acatttagatggtaatg----agagccactaaaggt--gaatgagagtatctggggaaagt-gtgtagCATACCGAGTT-TTTTATAAAAGAAAAAGCCTGTTTGTGCATCTCTA----TCAGTT--------GACCTGTCTCATAATGTCACTC--------TCATGAGCGTCCCATTCCCCCAACAAGGCGGCAAGCTACGGACTAGAATTACATCCTG-----TGCACCCCGGCCCCTGTCT---------ACACCCCAGCCCCACCT-----------GGGCCAGGCACTTCA--ATGCTCCC----GGTGACAgaggcaggcagtgcagcaccattagccccatcttacagatgaagatactgagg--------------------ctcaCCCCAGG-----GGCAGGGAGTTGAGAATCCTCAAGGG--AAAAAACTCAGGTGTT-----------------------------------------------------------------------------------TCCCCAAATC s panTro4.chr10 76538532 628 + 133524379 TTCACTTCAACACCAAGT---CCCAGCACATTCGCGAAGCTCTCCTCGGCTTCTCCAGCGGATGCTGCTGGCTCCATTCTCTTAAGTTTGATGA-AG-CAAGTCAGCCAGTTCACTAGGAAAGTAAAGAGGAGGCACGGGAGGTGT--GGGGAGTGGGAATGAGAAGGAAACATCAGGCAA-TGAGCACGCGAGAGGTCCAGC-----------AAGTTCTGCCATTTCTGCCTCCCAATagaggcctggtg-gga-atgacttgag---gagtccc--acatttagatggtaatg----agagccactagaggt--gaatgagagtatctggggaaagt-gtgtagCATACCGAGTT-TTTTATAAAAGAAAAAGCCTGTTTGTGCATCTCTA----TCAGTT--------GACCTGTCTCATAATGTCACTC--------TCATGAGCGTCCCATTCCCCCAACAAGGCGGCAAGCTACGGACTAGAATTACATCCTG-----TGCACGCCGGCCCCTGTCT---------ACACCCCAGCCCCACCT-----------GGGCCAGGCACTTCA--ATGCTCCC----GGTGACAgaggcaggcggtgcagcaccattagccccatcttacagatgaagatactgagg--------------------ctcaCCCCAGG-----GGCAGGGAGTTGAGAATCCTCAAGGG--AAAAAACTCAGGTGTT-----------------------------------------------------------------------------------TCCCCGAATC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76207301 639 - 133410057 TTCACTTCAACACCAAGT---CCTAGCACATTCGCAAAGCTCTCCTCGGCTTCTCCAGCGGATGCTGCCGGCTCCATTCTCTTAAGTTTGATGA-AG-CAAGTCAGCCAGTTCACTAGGAAAGTAAAGAGGAGGCACAGGAGGTGT--GGGGAGTGGGAACGAGAAGGAAACATCAGGCAC-TGAGCATGTGAGAGGTCCAGCGGGCACTCACCGAGTTCTGCCATTTCTGCCTCCCAAgagaggcctggtg-gga-atgacttgag---gagtccc--acatttagatggtaatg----agagccactagaggt--gaatgagagtatctggggaaagt-atgtagCATACCAAGTT-TTTTATAAAAGAAAAAGCCTGTTTGTGCATCTGTA----TCAGTT--------GATCTGTCTCATAATGTCACTC--------TCATGAGTGTCCCATTCCCCCAACAAGGCGGCAAGCTACGGACTAGAATTACATCCTG-----TGCACCCCAGCCCCTGTCT---------ACACCCCAGCCCCACCT-----------GGGCCAGGCACttca--atgctccc----ggtgacacaggcaggcagtgcagcaccattagccccatcttacagatgaagatactaagt--------------------ctcaCCCCAGG-----GGCAGGGAGTTGAGAATCCTCAAGGG--AAAAAACCCAGGTGTT-----------------------------------------------------------------------------------TCCCTGAATC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35142699 640 + 104879549 TTCGCTTCAACACCAAGT---CCCAGCACATTCACGAAGCTCTCCTCAGCTTCTCCAGCAGATGCTGCTGGCTCCATTCTCTTAAGTTTGATGA-AG-CAAGTCAGCCAGTTCACTAGTAAAGTAAAGAGGAGGCACGGGAGGTGT--GGGGAGTGGGAATGAGAAGGAAACATTAGGCAC-TGAGCACTCGAAAGGTCCAGCGGGCACTCACCAAGTTCTGCCATTTCTGCCTCCCAAgagaggcctggtg-gga-atgacttgag---gagtccc--acatttagatggtaatg----agagccactagaggt--gaatgagagtatctggggaaagt-acgtagCATACCGAGTTCTTTTATAAAAGAAAAAGCCTGTTTGTGCATCTGTA----TCAGTT--------GATCTGTCTCATAATGTCACTC--------TCATGAGTGTCCCATTCCCCCAACAAGGCGGCAAGCTACGGACTAGAATTACATCCTG-----TGTACCCCAGCCCCTGTCT---------ACACCCCAGTCCCACCT-----------GGGCCAGGCACTTCA--ATGCTCGC----GGTGACAgaggcaggcagtgcagcaccattagccccatcttacagatgaagatactgaga--------------------ctcaCCCCAGG-----GGCAGGGAGTTGAGAATCCTCAAGGG--AAAAAACCCAGGTGTT-----------------------------------------------------------------------------------TCTCTGAATC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73935297 615 - 130959383 TTCGCTTCAACACCAAGT---CCCAGCACATTCGCGAAGCTCTCCTCAGCTTCTGCAGCAGATGCTGCGGGCTCCACTCTCTTAAGTTTGATGA-AG-CAAGTGAGTCAGTTCACTAAGAAAGTAAAGAGGAGGCACGGGAGGTGT--GGGGAGTGGGAACGATAAGGAAACATTAGGCAC-TGAGCACGGGAGAGGTCCAGCGGGCACTCACCGAGTTCTGCCATTTCTGCCTCCCAAgagaggcctggtg-gga-atgacttgag---gagtccc--acatttagatggtaatg----aaagccactagaggt--gaatgagagtatctggggaaagt-atgtagCATATTGAGTT-TTTAATACAAGAAAAAGCCTATTTGTGCATCTGTA----TCAGTT--------GATCTGTCTCATAATGTCACTC--------TCATGAGTGTCCCATTCCCCCAACAAGGTGGCAAGCTACGGGCTAGAATTACATCCTG-----TGTACCCCGGCCCCTATCT---------ATACCCCAGCCCCACCT----------------------------------------GGTGACAgaggcaggcagtgtagcaccattag-cccatcttacagatgaagatactgagg--------------------ctcaCTCCAGG-----GGCATGGAGTTGAGAATCCTCAAGGG--AAAAAACCCAGGTGTT-----------------------------------------------------------------------------------TCCCTGAATC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75495883 615 - 133195287 TTCGCTTCAACACCAAGT---CCCAGCACATTCGCGAAGCTCTCCTCAGCTTCTGCAGCAGATGCTGCGGGCTCCACTCTCTTAAGTTTGATGA-AG-CAAGTGAGTCAGTTCACCAAGAAAGTAAAGAGGAGGCACGGGAGGTGT--GGGGAGTGGGAACGATAAGGAAACATTAGGCAC-TGAGCACGGGAGAGGTCCAGCGGGCACTCACCGAGTTCTGCCATTTCTGCCTCCCAAgagaggcctggtg-gga-atgacttgag---gagtccc--acatttagatggtaatg----aaagccactagaggt--gaatgagagtatctggggaaagt-atgtagCATATTGAGTT-TTTAATACAAGAAAAAGCCTATTTGTGCATCTGTA----TCAGTT--------GATCTGTCTCATAATGTCACTC--------TCATGAGTGTCCCATTCCCCCAACAAGGTGGCAAGCTACGGGCTAGAATTACATCCTG-----TGTACCCCGGCCCCTATCT---------ATACCCCAGCCCCACCT----------------------------------------GGTGACAgaggcaggcagtgtagcaccattag-cccatcttacagatgaagatactgagg--------------------ctcaCTCCAGG-----GGCATGGAGTTGAGAATCCTCAAGGG--AAAAAACCCAGGTGTT-----------------------------------------------------------------------------------TCCCTGAATC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73359592 614 - 125196307 TTCGCTTCAACACCAAGT---CCCAGCACA-TCGCGAAGCTCTCCTCAGCTTCTCCAGCAGATGCTGCAGGCTCCACTCTCTTAAGTTTGATGA-AG-CAAGTGAGTCAGTTCACTAAGAAAGTAAAGAGGAGGCACAGGAGGTGT--GGGGAGTGGGAACGAGAAGGAAACATTAGGCAC-TGAGCACGGGAGAGGTCCAGCGGGCACTCACCGAGTTCTGCCATTTCTGCCTCCCAAGAGAGGCCTGGTG-GGA-ATGACTTGAG---GAGTCCC--ACATTTAGATGGTAATG----AAAGCCACTAGAGGT--GAATGAGAGTATCTGGGGAAAGT-ATGTAGCATATCGAGTT-TTTAATACAAGAAAAAGCCTATTTGTGCATCTGTA----TCAGTT--------GATCTGTCTCATAATGTCACTC--------TCATGAGTGTCCCATTCCCCCAACAAGGTGGCAAGCTACGGGCTAGAATTACATCCTG-----TGTACCCCGGCCCCTATCT---------ATACCCCAGCCCCACCT----------------------------------------GGTGACAGAGGCAGGCAGTGTAGCACCATTag-cccatcttacagatgaagataCTGAGG--------------------CTCACTCCAGG-----GGCATGGAGTTGAGAATCCTCAAGGG--AAAAAACCCAGGTGTT-----------------------------------------------------------------------------------TCCctgaatc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72192232 623 - 125710982 TTCGCTTCAACACCAAGT---CCCAGCACATTCGCGAAGCTCTCCTCGGCTTCTCCAACAGACGCTGCGGGCTCCATTCTCTTAAGTTTGATAA-AG-CAAGTGAGTCAGTTCACTAAGAAAGTAAAGAGGAGGCACGGGACATGT--GGGGAGTGGGAACGAGAAGGAAACATTAGGCAG-TGAGCACACGAGAGGTCCAGCAGGCACTCACCGAGTTCTGCCGTTTCTGCCTCCCAAgagaggcctggtg-gga-atgacttgag---gagcccc--acatttagatggtaatg----aaagccactagaggt--gaatgagagtatctggggaaagt-atgtagCATACCGAGTT-TTTAATACAAGAAAAAGCCTGTTTGTGCACCTGTA----TCAGTT--------GATCTGTCTCATAATGTCACTCTCATGAGTTCATGAGTGTCCCATTCCCTCAACAAGGTGGCAAGCTACGGGCTAGAATTACATCCTG-----TGTACCCCAGCCCCTATCT---------ACACCCCAGCCCCACCT----------------------------------------GGTGACAgaggcaggcagtgtagcaccattag-cccatcttacagatgaagatactgagg--------------------ctcaCTCCAGG-----GGCATGGAGTTGAGAATCCTCAAGGG--AAAAAACCCAGGTGTT-----------------------------------------------------------------------------------TCCCTGAATC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75651232 629 - 121768101 TTCACTTCAACACCAAAT---CCCAACACTTTTGCAAACCT-TTCTCACCTTCTCTAGCAGATGCTGCTGGCTCCATTCTCTTAAGTCTGGTAA-AG-CAAGTCAGCCAGCTCACTAGGACAGTAAAGAGGAGGCACAGGAGGTGT--GGGGAGTGGGAACGAGAAGGAAACATTAGGCGC-TGAGCACAAGAGAGGTCCAGCGGGCACTCACCGAGTTCTGCCATTTCTGCCTCCCAAGAGACGCCTGGTG-GGA-ATGACTTGA-----CCCTCC--ACATTTA------CAAG----AGAGCCACTAGAGGT--GAATGAGAGTATCTGAGGAAAGC-ATGAGGCACACAGAGTT-TTTTTAAAAAGAAAAAGCCTGTCTGTGCATCTGTA----TCAGTT--------GATCTGTCTC---ATGTCACTC--------TCATGACTGTCCCATTCCCCAAACAAGCTCACAGGCTATGGGCTAGAATTACATCCTG-----TGCACCCTGGCCGCTGTGT---------ACACCCCAGTCCTACCT-----------GGGCCAGGCACTTCA--ATGCTCCC----AGTGACAgaggcaggcagtgtagcaccattagccccatctcacagatgaagatactgagg--------------------ctcaCTCCAGG-----AGCAGGTAGTTGAGAATCCTCAAGGGAAAAAAAATGCAGGTGTT-----------------------------------------------------------------------------------TCCCTGAATC i calJac3.chr12 C 0 C 0 s mm10.chr14 24241935 623 + 124902244 TTCAGCTCCATCTCAAGT---GCCACTTTCTCCTCCAATTTTCCCTCCACTTCTTCAGCAGATGATCCT-ATGATAGTCTCTTTGTGTTAGTGACAG-CATCTCGCTCCCTCTCTGCAGGAAATGAAGAAAAGGCACAGGAGGAGGAAAGGGACAGGAAGAGACAAGACAATTCTAAGCACATGGGTG---GTGAGATCCAGCAGGAAGCCA------------GTTTCTGTCTTCCAAGAGAAGCCTGGCACAAA-ACCATTTAAG---AAGCCCTTGACATTTAGATGGTAATTAGTCAGAGCCACACTAGGTCCAAGCGAAAGTG-CTGGAGAAAGTCATACAGTACAC--AGTT-TGTAAGAAAGCAAAAAGCCTGTGTCTGTTCTTGTA----TCTGTCACTCAACAGATCCATCTC---------CCC--------TCA--AGTGTCCCACTAATC---CAAGGCCTTAAGATACAT----GGACAGCCTCCTGGCTGCCTCACTCCAGCCCATTCCCTGGAGCTGGACATCTCATCCCTCCCT--------------GAAGACATTTCGCCCTACTCC-----AAGGACTAAGGCAGGAGGCAGGGTACCCTGGGCCCCAC------ACTGTAGACCCTGAGG--------------------CCCTACGCAGA-----AGGA-GAATCCAAGGATCTCTGTGAG--AGAAA--TCAGAAAAT-----------------------------------------------------------------------------------GC----AATT i mm10.chr14 I 768 C 0 s canFam3.chr4 27802355 737 + 88276631 GCCTCTTAGACATCAGCTCAACCCAGTCCCTCCTCGAAGCCTTCCTC--------CAGCAGCCACTGCCGGGTCTGCTCCCACGCCGCTGGTGA-AGCCAAGTGAG-CAGCGCGTGAGGACACTGACCAGGAGGCACA------GT--GATG---------GAGAGGGGAGCTTTCACCTC-CGAGCACACAGG----------GGCAACCACCAGG-TCTGCCACTTATGTCTTGTACGAGAGGCCCGGGG-TAACATGATTTGGGGGAGACCTTC--ACGTTTAGGTGGTAATT----CGAGCCACTAGAGGT--GGATGAGAATGTTGGGGCAAAGT-ATGTGATATACGGAGTT-TTAAAAGGAGGAAAAAGCCTGCTTGT--ATCTGTATCACTCAATT--------GATCTATCTCATCATGTCACTC--------TCCTGAGTGTCCCATTCCCCCAACTAGGTGGCAAGCTGCGAGCTGGAATTACATCCTC-----CTCACCTCTGTCTCCGTGC---------GCATGGCAGACCCACTGGACTGAGCACAGGACCAGGCACTTCC--GCCCTCCCCCTGAGTTGCTGGGACAGGCAGCCTTGCACCCttagtttcatctcacaggtaaagaaactgaggctcCCAGCCAGGAAGGGGCCCTCACTGCAGGGAGACGGCAGGCAGTCAAGGATCTTCAAGTG--AGAAAACTCAGATGTTAGTAACTGAATCAGAGAGAAGAGACTAGACACTgggacgcctgggttgaacgtctgtcctcggcccagggcgtgatcctggggtcctcagatc i canFam3.chr4 C 0 I 102 a score=1555661.000000 s hg38.chr10_KI270825v1_alt 161014 522 + 188315 AAAG---GGAAAAAACAAAGGACTGCATGGGGCTCCAAGTGACCAAGCTAGACTTGGTT---AC---------TGGGAAAAAC--AAGAGACCCAACTGAGCCACTCAGAAGTA---AACAATTCTGTCTTCTCCCTACCACCAGCTGGGGC-AAAGGTGTTCGCT-TGTTCCCCGCAGATCCATGTATCAAATCCGGGACAAAAGAAAGCTACATAATTTCAGAGTCCCACAGTGACTGGAAATG-TCCTGAAATTGTAGTGGGAAGGCCTAACCAGGGAACAGGAAAAACCACCCC-AGACAAGGAATCAGGGGCACTGGGCTTGGCCTTGACTCAGGCACCTTTCTGCCCTGCGACTTCTTCCT-------------TAC-----AGACAGGGCCCTGGAACC---------AAAGATCATAAGACACCACTC-ATCTCCCTGGGGCTGCCACAGAGTTAA-TGAGATATGAAGATA-------GGACACAAAATCCTGAATGACAATGCCCTATCAATACCGGAATAAGA---GCCACACCTCCAACAA----AAAAACCACAACACAGTGTGTCTCCTAGTCAC- s panTro4.chr10 76539160 520 + 133524379 AAAG---GGAAAAAACAAAGGACTGCATGGGGCTCCAAGTGACCAAGCTAGACTTGGCT---AC---------TGGGAAAAAC--AAGAGACCCAACTGAGCCACTCA--AGTA---AACAATTCTGTCTTCTCCCTACCACCAGCTGGGGC-AAAGGTGTTCACT-TGTTCCCGGCAGATCCATGTATCAAATCCGGGACAAGAGAAAGCTACATAATTTCAGAGTCCCACAGTGACTGGAAATG-TCCTGAAATTGTAGTGGGAAGGCCTAACCAGGGAACAGGAAAAACCACCCC-AGACAAGGAATCAGGGGCACTGGGCTTGGCCTTGACTCAGGCACCTTTCTGCCCTGCGACTTCTTCCT-------------TAC-----AGACAGGGCCCTGGAACC---------AAAGATCATAAGACACCACTC-ATCTCCCTGGGGCTGCCACAGAGTTAA-TGAGATATGAAGATA-------GGACACAAAATCCTGAATGACAATGCCCTATCAATACCGGAATAAGA---GCCACACCTCCAACAA----AAAAACCACAACACAGTGTGTCTCCTAGTCAC- i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76207940 522 - 133410057 AAAG---GGAAAAAACAAAGGACTGCATGGGGCTCCAAGTGACCAAGCTAGACTCGGTT---AC---------TGGGAAAAAC--AAGAGACCCAACTGAGCCACTCAGAAGTA---AACAAGTCTGTCCTCTCCCTACCACCAGCTGGGGC-AAAGGTGTTCACT-TGTTCCCTGCAGATCCATGTATCAAATCCGGGACAAGAGAAAGCTACATAATTTCAGAGTCCCACAGTGACTGGAAATG-TCCTGAAATTGCAGTGGGAAGGCCTAACCAGGGAACAGAAAAAACCACCCC-AGACAAAGAATCAGGGGCACTGGGCTTGGCCTTGACTTGGGCACCTTTCTGCCCTGCGACTTCTTCCT-------------TAC-----AGACAGGGCCCTGGAACC---------GAAGATCATAAGACACCACTC-ATCTCCCTGGGGCTGCCACAGAGTTAA-TGAGATATGAAGACA-------GGACACAAACTCCTGAATGACAATGCCCTATCAATACCGGAATAAGA---GCCACACTTCCAACAA----AAAAACCACAACACAGTGTGTCTCCTAGTCAC- i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35143339 531 + 104879549 AAAG---GGAAAAAACAAAGGACTGCATGGGGCTCCAAGTGACCAAGCTAGACTCAGTT---AC---------TGGGAAAAAC--AAGAGACCCAACTGAGCCACTCGGAAGTA---AACAATTCTGTCGTCTACCTACCACCAGCTGGGGTGAAAGGTGTTTTCT-TGTTCCCTACAGATCCATGTATCAAATCCGGGACAAGAGAAAGCTACATAATTTCAGAGTCCCCCAGTGACCGGAAATG-TCCTGAAATTGTAGTGGGAAGGCCTAACCA-GGAACAGGAAAAACCACCCCTAGACAAGGAATCAGGGGCACTGGGCTTGGCCTTGACTCGGGCACCTTTCTGCCCTGCGGCTTCTTCCT-------------TA------AGACAGGGCCCTGGAACCGAATGACAGGAAGATCATAAGACACCACTC-ATCTCCCTGGGGCTGCCACAGAGTTAA-TGAGACATGAAGATA-------GGACACAAAATCCTGAATGACAATGCCCTATCAATACTGGAATAAGA---GCCACACTTCCAACAA----AAAAACCACAACACTCTGTGTCTCCTAGCCAC- i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73935912 472 - 130959383 AAAG---AGAAAAAACAAAGGACTGCATGGGGCTCCAAGTGACCACGCTAGACTCGGTT---AC---------TGGGAAAAAC--AAGAGACCCAACTGAGCCACTCAGAAGTA---AACAATTCTGTCCTCCCCCTACCACCAGCTGGGGC-AAAGGTGTTCACT-TGTTCCCTACAGATCTACATATCAAATCCAGGACAAGACAAAGC--------TTCAGAGTCCCCCAGTGACTGGAAATG-TCCTGAAGTTGTAGTGGGAAGGCCTAACCAGGGAACAGGAAAAACCACCCCTAGACAAGGAATCAGGAGCACTGGGCTTGGCCTTGACTCCAGCACTTTTCTGCACTGTGACTTCTTCCT-------------TAC-----AGACAGGGCCCTGGAACTAAATGACATGAAGATCATAAGACACCACTC-ATCTCCCTGGGGCTGCCACGGAGTCAA-TGAGATATGAAGATA-------GGACACAAAATCCTG-----------------------------------------------------------ACCACAACACTGTGTGCCTCCTAGTTGC- i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75496498 480 - 133195287 AAAG---AGAAAAAACAAAGGACTGCATGGGGCTCCAAGTGACCACGCTAGACTCGGTT---AC---------TGGGAAAAAC--AAGAGACCCAACTGAGCCACTCAGAAGTA---AACAATTCTGTCCTCCCCCTACCACCAGCTGGGGC-AAAGGTGTTCACT-TGTTCCCTACAGATCTACATATCAAATCCAGGACAAGACAAAGCTACGTAATTTCAGAGTCCCCCAGTGACTGGAAATG-TCCTGAAGTTGTAGTGGGAAGGCCTAACCAGGGAACAggaaaaaccacccctagacaaggaatcaggagcactgggcttggccttgactccagcacttttctgcactgtgacttCTTCCT-------------TAC-----AGACAGGGCCCTGGAACTAAATGACATGAAGATCATAAGACACCACTC-ATCTCCCTGGGGCTGCCACGGAGTCAA-TGAGATATGAAGATA-------GGACACAAAATCCTG-----------------------------------------------------------ACCACAACACTGTGTGCCTCCTAGTTGC- i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73360206 480 - 125196307 aaag---agaaaaaacaaaggacTGCATGGGGCTCCAAGTGACCACGCTAGACTCGGTT---AC---------TGGGAAAAAC--AAGAGACCCAACTGAGCCACTCAGAAGTA---AACAATTCTGTCCTCCCCCTACCACCAGCTTGGGC-AAAGGTGTTCACT-TGTTCCCTACAGATCTACATATCAAATCCAGGACAAGAGAAAGCTACGTAATTTCAGAGTCCCCCAGTGACTGGAAATG-TCCTGAAGTTGTAGTGGGAAGGCCTAACCAGGGAACAGGAAAAACCACCCCTAGACAAGGAATCAGGAGCACTGGGCTTGGCCTTGACTCCGGCACTTTTCTGCACTGTGACTTCTTCCT-------------TAC-----AGACAGGGCCCTGGAACTAAATGACATGAAGATCATAAGACACCACTC-ATCTCCCTAGGGCTGCCACGGAGTCAA-TGAGATATGAAGATA-------GGACACAAAATCCTG-----------------------------------------------------------ACCACAACACTGTGTGCCTCCTAGTTGC- i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72192855 483 - 125710982 AAAG---AGAAAAAACAAAGGACTGCATGGGGCTCCAAGTGACCACGCTAGACTCCGTT---AC---------TGGGAAAAAC--AAGAGACCCAACTGAGCCACTCAGAAGTAAACAACAATTCTGTCCTCCCCCTACCACCAGCTGGGGA-GAAGGTGTTCACT-TGTTCCCTACAGATCTACATATCAAATCCAGGACAAGAGAAAGCTACGTAATTTCAGAGTCCCCCAGTGACTGGAAATG-TCCTGAAGTTGTAGTGGGAAGGCCTAACCAGGGAACAGGAAAAACCACCCCTAGACAAGGAATCAGGAGCACTGGGCTTGGCCTTGACTCCGGCACCTTTCTGCACTGTGACTTCTTCCT-------------TAC-----AGACAGGGCCCTGGAACTAAATGACATGAAGATCATAGGACACCACTC-ATCTCCCTGGGGCTGCCACGGAGTCAA-TGAGATATGAAGATA-------GGACACAAAATCGTG-----------------------------------------------------------ACCACAACACTGTGTGCCTCCTAGTCGC- i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75651861 530 - 121768101 AAAG---GGAAAAAACAAAGGACTGCCTGGGGATCCAAGTGACCAAGCTAGACTCGGGTAAAAC---------TGGGAAAAACA-AAGAGACCCAACTGAGACGCTCAGAAGTAAAAAACAACTCTGTCCTCTCCCTACCACCAGCTAGAGT-GAAGATGTTCACT-TGTTCCCTACAGATCCATGTATCAAATCCGGGACAAGAGAAAGCTACATAATTTCTGAGTCCCCCAATGACAAAAAATGTTTCTGAAATTGTAGTGGGAAGGCCTAACCAGGGAACAGGAAAAACCACCCCTAGACAAGGAATCAGAAGCACTGGGCTTGGCCT---CTCCGGCACCTTTCTGCCCTGCAGCTTCTTCCT-------------CAC-----AGACAGGGCCCTGGAACCGAGTGACATGAA---CATAAGACACCACTC-ATCTCCCT-GGGTTGCCACGGAATCGA-T--GATATGAA------------GACACAAAACCCTGAATGGCAATGCCCTATCAATACTGGAATAAGA---ACTACACCCTCAACAACAACAACAAAAACAACACTGTGTGTTTCCTAGTCAC- i calJac3.chr12 C 0 C 0 s mm10.chr14 24242558 476 + 124902244 AAAGCATAAGAAAAACA---------CTGAAGC----AATAACCAAATTCAACTCTGAC---AC---------AGTTAAAGACACAAGAGACCCCA-TCATCCAGTCAAGGGCA------GTTTCTA---CCTCTCTGTCACCAGCTGGGGC-AAAGAAATTCACTCCCTTCCCTACAAATCCATGTGT--------GAGCAAGATAG-------------CAGAGTTCTTTAAC-ACCAATAATC-TCTTGAAATGGCAGTgagaaggcctggtcagcttacaggaggaactgccca-agacaagaaataagagaga---ggct---cctggtgtctgtcaccttcctgtcctctga--tcttcct-------------agtgcctgacactggccctgggaactcaATGTAATGAAGATGTTAAGACACTCCTCTGTGACACTGGGGTGGCCACAG----------GTGGTGAAGATA-------AGTTACAATATGCTC---AACAACAGCATGTCAGGCCCAGGAGAGGA---GCCCCTGCTCCCCCCT--------AACTCAACCCCATGTTCCTCC-AGTCAC- i mm10.chr14 C 0 I 24 s canFam3.chr4 27803194 534 + 88276631 aaaa---AAAAAAGACTAGGGACAGAGTG-GGTTCTGAATGACCAAACAAGATCCTGGT---TCACCTGCAGAAAAGAAAGAC--ATGAGACAC--CTGAGCCCCTCGAGAGAA--CAGGAGTTCTGCCCTCTTAGTACCACCAGCAGAGGC-AAAGGTGCTCATT-TCTTCCTTACAGATCCATGTAT--------------------GCTAGAAAATTCCAGAGTTTCTCAATG-CAGGAAACA-GCCTGAAATTGTACTGAGGGGGCCTAATCAGGTAACAGAAGAAAACATCCC--AACACGGAATCAGGAGCAGGGGCCTTAGCCTCACCTCGGGCCCCTTCCTGTCCTGTGACTCCTGCCCTGTCCTCACACCATAC-----AGATGTGAGTGTGGAACCCAGTGCAATGCGGA---CAAGACACCCCTC-ATCTCCCTGGGGCGGCTACAGAATTAAGTGAGATGTAAAAGTATGCCGTGAGATTCAAAATGCTGAGCAGCAATGTAGCATCACCCCTGGAACAGGAATGGCCCTGGCCCCCAAAT--------AAAACAACACTGTATGTTCCTTAGTCATC i canFam3.chr4 I 102 C 0 a score=796090.000000 s hg38.chr10_KI270825v1_alt 161536 246 + 188315 TCCACACCCCCAGGCCTGAGCGTGGTAGGTT-TAAATGTCTGGGGATC--TAACTCAGCAAGAGTTGCCCCGATGGGTTGGGTTTGCTCACCTGCCCACCAACACCCAGGCACATGTCCTCCCCAGTTTC-CTTCCAGTTCCAGGCCCCACGTGGTAGG----------------CTGCTGCCGATGCAG-ACTCCCTCAGCACCCAAGTGCCAG-TGGGGGATGGGCATTCTGGATCAGGAGCCCACACAGGGTGTGGAATCCATCA s panTro4.chr10 76539680 246 + 133524379 TCCACACCCCCAGGCCTGAGCGTGGTAGGTT-TAAATGTCTGGGGATC--TAACTCAGCAAGAGTTGCCCCGATGGGTTGGGTTTGCTCACCTGCCCACCAACACCCAGGCACGTGTCCTCCCCAGTTTC-CTTCCAGTTCCAGGCCCCACGTGGTAGG----------------CTGCTGCCAATGCAG-ACTCCCTCAGCACCCAAGTGCCAG-TGGGGGATGGGCATTCTGGATCAGGAGCCCACACAGGGTGTGGAATCCATCA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76208462 248 - 133410057 TCCACACCCCCAGGCCTGAGCGTGGTAGGTT-TAAATGTCTGGGGATCTATAACTCAGCAAGAGTTGCCCCGATGGGTTGGGTTTGCTCACCTGCCCACCAACACCCAGGCACATGTCCTCCCCAGTTTC-CTTTCAGTTCCAGGCCCCACGTGGTAGG----------------CTGCTGCCGATGCAG-ACTCCCTCAGCACCCAAGTGCCAG-TGGGGGATGGGCATTCTGGATCAGGAGCCCACACAGGATGTGGAATTCATCA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35143870 245 + 104879549 TCCACACCCCCAGGCCTGAGCGTGGTGGGTT-TAAATATCTGGGGATC--TAACTCAGCAAGAGTTGCCCCAATGGGTTGGGTTTGCTCACCAGCCCACCAACACCCAGGCCCATGTCCTCCCCAGTTGC-CTTCCAGTTCCAGGCCCCACGTGGTAGG----------------CTGCTGCCGATGCAG-A-TCCCTCAGCACCCAAGTGCCAG-TGGGGGATGGGCATTCTGGATCAGGAGCCCACACAGGGTGTGGAATCCATCA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73936384 242 - 130959383 TCCACACCCCCAGGCCTGAGCATGGTGGGTTATGAATGTTTGGGGATC--TAACTCAGTAAGAGTTGCCCCGATGGGTTGGGTTTGCTCACCTGCCCACCAGCACCCAGGCATGTGTCCTCCCCAGTTTC-CTTCCAGTTCCAGGCCCCACGTGGTAGG----------------CTGCTGCCAATGCAG-ACTCCCTCAGCACCCAAGTGCCAG-TGGGGGATGGGCACTCTGGACCAGGAGCCCACACAAGGTG-----TCCATCA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75496978 242 - 133195287 TCCACACCCCCAGGCCTGAGCATGGTGGGTTATGAATGTTTGGGGATC--TAACTCAGTAAGAGTTGCCCCGATGGGTTGGGTTTGCTCACCTGCCCACCAGCACCCAGGCATGTGTCCTCCCCAGTTTC-CTTCCAGTTCCAGGCCCCACGTGGTAGG----------------CTGCTGCCAATGCAG-ACTCCCTCAGCACCCAAGTGCCAG-TGGGGGATGGGCACTCTGGACCAGGAGCCCACACAAGGTG-----TCCATCA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73360686 242 - 125196307 TCCACACCCCCAGGCCTGAGCATGGTGGGTTATGAATGTTTGGGGATC--TAACTCAGCAAGAGTTGCCCCGATGGGTTGGGTTTGCTCACCTGCCCAACAGCACCCAGGCATGTGTCCTCCCCAGTTTC-CTTCCAGTTCCAGGCCCCACGTGGTAGG----------------CTGCTGCCAATGCAG-ACTCCCTCAGCACCCGAGTGCCAG-TGGGGGATGGGCACTCTGGACCAGGAGCCCACACAAGGTG-----TCCATCA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72193338 242 - 125710982 TCCACACCCCCAGGCCTGAGCATGGTGGGTTATGAATGTTTGGGGATC--GAACTCAGCAAGAGTGGCCCCGATGGGTTGGGTTTGCTCACCTGCCCACCAGCACCCAGGCATGTGTCCTCCCCAGTTTC-CTTCCAGTTCCAGGCCCCACGTGGTAGG----------------CTGCTGCCAATGCAG-ACTCCCTCAGCACCCAAGTGCCAG-TGGGGGATGGGCACTCTGGACCAGGAGCCCACACAAGGTG-----TCCATCA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75652391 243 - 121768101 TCCACAACCCCAGGCCTGAGCGTGGTAGGTTATAAATATGTGGGGATC--TAAC----CGAGTGTTGCCCGGATGGGTTGGGTTTGCTCACCTGCCCACCTACAGCCAGGCACATGTCCTCCCCAGCTTC-CTTGTGGTTCCAGGCCCCACGTGGTGGG----------------CTGCTGCAGATGCAG-ACTCTGTCAGCACCCAAGTGCCAG-TGGGGGATGGGCATTCCGGACCAGGGGCCCACCTAGGGTGTGGAATCCATCA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27803728 248 + 88276631 TTCATA-CCCTAGGCCTGAATCTGGTGGGTTATAAATGTCTGCAGCTC--TGA----GCATGAGCACAGCAGATGGATTTAGTTTGCTCATCTGCCCAAGACCACCCAGG------------CCAGTTTCGCCCTCAGCTACAGG-CCCGCGTGGGGGGTGCTGCTGGGCATCACCTGCCTCCAGCACAGCAAAATCCCAGTGCCACAGTGCCAGCCAGGGGATGGGCGCTCCGGACCAGCGGCCCACGAGGGGTATGGAAGCCACCA i canFam3.chr4 C 0 I 202 e mm10.chr14 24243034 24 + 124902244 I a score=1127463.000000 s hg38.chr10_KI270825v1_alt 161782 375 + 188315 AGGAAGCTCCTAGGTGGGTGATGGCATCATCTCCA--ACAGAGAATCGGTGCCAAAGCAGCCACCCCTTGACGCTAAGGATCCCAG-GGAGCCAGCTGGTTCCTCTCTCAGGCTC--CGCAATGGCCTCGAACTGAGGCCAATTCAAACCCAGAGCTGCTGCCCAGAGCACAGAGTGGAAATCACTCAGGAGTGGAAGGAGGCAGGACCAAGTGCTGGGTTTTCCTGACTATGGCTCCTCAAGGAAGAAGACTTCCATTCCTTCAGCCAGAGCCGCTCTCTTATGCACTGAGCTTTG-ACCATAAGGAATACTTCCTGGCTAAAAG-----AAAAAAAAGCAAAAAAGTGGAGACCTACAACACAGCAATTTACCCTTCACAAAGG s panTro4.chr10 76539926 375 + 133524379 AGGAAGCTCCTAGGTGGGTGATGGCATCATCTCCA--ACAGAGAATCGGTGCCAAAGCAGCCACCCCTTGACGCTAAGGATCCCAG-GGAGCCAGCTGGTTCCTCTCTCAGGCTC--CGCAATGGCCTCGAACTGAGGCCAATTCATACCCAGAGCTGCTGCCCAGAGCACAGAGTGGAAATCACTCAGGAGTGGAAGGAGGCAGGACCAAGTGCTGGGTTTTCCTGACTATGGCTCCTCAAGGAAGAAGACTTCCATTCCTTCAGCCAGAGCTGCTCTCTTATGCACTGAGCTTTG-ACCATAAGGAATACTTCCTGGCTAAAAG-----AAAAAAAAGCAAAAAACTGGAGACCTACAACACAGCAATTTACCCTTCACAAAGG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76208710 375 - 133410057 AGGAAGCTCCTAGGTAGGTGATGGCATCACCTCCA--ACAGAGAGACAGTGCCAAAGCAGCCACCCCTTGATGCTAAGGATCCCAG-GGAGCCAGCTGGTTCCTCTCTCAGGCTC--CGCAACGGCTTTGAACTGAGGCCAGTTCACACCCAGAGCTGCTGCCCAGAGCACAGAGTGGAAATCACTCAGGAGTGGAAGGAGGCAGGAGCAAGTGCTGGGTTTTCCTGACTATGGCTCCTCAAGGAAGAAGACTTCCATTCCTTCAGCCAGAGCCGCTCTCTTATGCACTGAGCTTTG-ACCATAAGGAACACTTCCTGGCTAAAAG-----AAAAAAAAGCAAAAAACTGGAGACCTACAACACAGCAATTCACCCTTCACAAAGG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35144115 362 + 104879549 AGGAAGCTCCTAGGTGGGTGATGGCATCACCTCCA--ACAGAGAGACGGTGCCAAAGCAGCCACCCCTTGACGCTAAGGATCCCAG-GGAGCCAGCTAGTTCCTCTCTCAGGCTC--CGCAATGGCCTCAAACTGAGGCCAATTCACA-------------CCCAGAGCATGGAGTGGAAATCACTCAGGAGTGGAAGGAGGCAGGACCAAGTGCTGGGTTTTCCTGACTATAGCTCCTCAAGGAAGAAGACTTCCATTCCTTCAGCCAGAGCTGCTCTCTTATGCACTGAGCTTTG-ACCATAAGGAACACTTTCTGGCTAAAAG-----AAAAAAAAGCAAAAAACTGGAGACCTACAACACAGCAATTCACCCTTCACAAAGG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73936626 344 - 130959383 AGGAAGCTC-----------------------------CAGAGAGACGGTGCCAAAGCAG-CACCCATTGATGCTAAGGATCCTAG-GGAGCCAGCTGGTTCCTCTCTCAGGCTC--CGCAATGGCCTCGAACTGAGGCCAATTCACACCCAGAGCTGCCGCCCAGAGCACAGAGTGGAAATCACTCAGGAGTGGAAGGAAGCAGGACCAAGTGCTGGATTTTCCTGACTATGACTCCTCAAGGAAGAAGACTTCCATTCCTTCAGCCAGAGCCACTCTC--ATGCACTGAGCTTTG-ACCATAAGAAACACTTCCTAGCTAAAAG------AAAAAAAGCAAAAAACTGGAGACCTGTAACACAGCAATTCACCCTTCACAAAGG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75497220 345 - 133195287 AGGAAGCTC-----------------------------CAGAGAGACGGTGCCAAAGCAG-CACCCATTGATGCTAAGGATCCTAG-GGAGCCAGCTGGTTCCTCTCTCAGGCTC--CGCAATGGCCTCGAACTGAGGCCAATTCACACCCAGAGCTGCCGCCCAGAGCACAGAGTGGAAATCACTCAGGAGTGGAAGGAGGCAGGACCAAGTGCTGGATTTTCCTGACTATGACTCCTCAAGGAAGAAGACTTCCATTCCTTCAGCCAGAGCCACTCTC--ATGCACTGAGCTTTG-ACCATAAGAAACACTTCCTAGCTAAAAG-----AAAAAAAAGCGAAAAACTGGAGACCTGTAACACAGCAATTCACCCTTCACAAAGG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73360928 342 - 125196307 AGGAAGCTC-----------------------------CAGAGAGACGGTGCCAAAGCAG-CACCCATTGATGCTAAGGATCCTAG-GGAGCCAGCTGGTTCCTCTCTCAGGCTC--CGCAATGGCCTCGAACTGAGGCCAATTCACACCCAGAGCTGCCGCCCACAGCACAGAGTGGAAATCACTCAGGAGTGGAAGGAGGCAGGACCAAGTGCTGGATTTTC----CTATGACTCCTCAAGGAAGAAGGCTTCCATTCCTTCAGCCAGAGCCACTCTC--ATGCACTGAGCTTTG-ACCATAAGAAACACTTCctagctaaaag----aaaaaaaaagcgaaaaaCTGGAGACCTGTAACACAGCAATTCACCCTTCACAAAGg i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72193580 372 - 125710982 AGGAAGCTCCTAGGTGGGTGATGGCATCACCTCCA--ACAGAGAGAGGGTGCCAAAGCAG-CACCCCTTGATGCTAAGGATCCTAG-GGAGCCAGCTGGTTCCTCTCTCAGGCTC--CGCAATGGCCTCGAACTGAGGCCAATTCACACCCAGAGCTGCCGCCCAGAGCACAGAGTGGAAATCACTCAGGAGTGGAAGGAGGCAGGACCAAGTGCTGGATTTTCCTGACTATGACTCCTCAAGGAAGAAGACTTCCATTCCTTCAGCCAGAGCCACTCTC--ATGCACTGAGCTTTG-ACCATAAGAAACACTTCCTGGCTAAAAG-----AAAAAAAAGCGAAAAACTGGAGACCTGTAACACAGCAATTCACCCTTCACAAAGG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75652634 380 - 121768101 AGGAAGCCCCTAGGAGGGTTAGGGCATCACCTCCAACATAGAGAGATGGTGACAAAGCAGACACCCCTTGACGCTAAGGATCCTGG-GGATCCAGCTGGTTCCTCTCTCAGGCTC--CACAAGGGCCTCTAACTGAGGCCAATTCACACACAGAGCTGCCAGCCAGAGCACAGAGTGGAAATCACTTGGGAGTGGAAGGAGGCAAGACCAAGTGCTAGGTTTCCCTGACTATGGCTCCTCAAGGAAGAAGACCTCCATTCCTTCAACCAGAGTTGCTCTCTTACGCACTGAGCTTTG-ACCATAAGAA--ACTTCCTGGCTAAAAGAAAAAAAAAAAAAGCAAAAAACTTGGGACCTACAACACAGCAATTCACCCTTCACAAAGG i calJac3.chr12 C 0 C 0 s canFam3.chr4 27804178 308 + 88276631 ATAAAGCCCCTAACTGGGTGATGGCTGCACCAGTA--ACACAGACACAGTGACAAAGGGGCTGCCCCTTGATGCTAGGGATCCCCGCGAAGCCAGCTGGTTCCTCTCTCAGGCTCCTCACAAAAGCTTTGCA-TGGAGCTGACT-ACAAGCAGGGTGGCGGACCTGTGTGCAAAG-------------------------------------------------------------------GGAAGAGTGCCTCCCTCCCTGCAACCAGAGCAGCTCTCTTACGCACTGAGCTTTGCCCCATAAGAAGGGCTCGCTGGCCAAAAG-----AGAAAAAA--AGAAAGTTGGGAAACCACTGCACAATAACTCATCCTTTACAAAGG i canFam3.chr4 I 202 I 80 e mm10.chr14 24243034 24 + 124902244 I a score=838754.000000 s hg38.chr10_KI270825v1_alt 162157 287 + 188315 AGCCTCCCCTGCgcc-------ggggcagtggctcacgcctgtaatcccaacacttttgggaggctgaggcaagcagatcgcttgagctcaggagttcgagaccatcctagacaacatggagaaatgccatctctacacaatatacaaaaattagctggtgtggtggcatgtgcctgtggtcccagctacttgcgggg-ctgaggcaggaggatggcttgagaccaggaggcggaggctgcagtgagccgagattgtgccactgcactccagcctgggtgacacagtgagaccct s panTro4.chr10 76540301 287 + 133524379 AGCCTCCCCTGCAcc-------ggggcagtggctcacgcctgtaatcccaacacttttgggaggctgaggcaagcagatcgcttgagctcaggagttcaagaccatcctagacaacatggagaaatgccatctctacacaatatacaaaaattagctggtgtggtggcatgtgcctgtggtcccagctacttgcgggg-ctgaggcaggaggatggcttgagaccgggaggcggaggctgcagtgagccgagattgtgccactgcactccagcctgggtgacacagtgagaccct i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76209085 287 - 133410057 AGCCTCCCCCGCgcc-------ggggcagtggctcacacctgtaatcccaacacttttgggaggctgcagcaagcagaccgcttgagctcaggagttcgagaccatcctagacaacatgaagaaaccccatctctacaaaatatacaaaaattagctggtgtggtggcatgtgcctgtggtcccagctacttgggggg-ctgaggcaggaggatggcttcagaccgggaggcggaggtggcagtgagctgagattgtgccactgcactccagcctggctgacacagtgagaccct i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35144477 286 + 104879549 AGCCTCCCCGCCACT-------ggggcagtggctcacgcctgtaatcccaacacttttgggaggctgagacacgcagattgcttgagctcaggagttcgagaccatcctggacaacatggataaac-ccatttctacaaaatatacaaaaattagctggtgtggtggcaaatgcctgtggtcccaggtacttgggggg-ctgaggcaggagaatggcttgagacagggaggcggaggctgcagtaagccgagattgtgccgctgcactccagcctgggtgacacagtgagaccct i nomLeu3.chr18 C 0 M 1527 s rheMac3.chr9 73936970 295 - 130959383 AGCCCCCCCCACCCCCACCCCAAGGgcagtggctcactcctgtagtcccaacacttttgggaggcagaggcaaacagatcgcttgaactcaggagttcgagaccatcctggacaacatggagaaaccccatctctgcaaaatatacaaaaattagctggtgtggtggcatgttcctgtggtcccagctacttgggggggctgaggcaggaggatggcttgagactgggaggcggaggctgcagtgagccgagactgtgccactgcactccagcctgggtgacacagagagaccct i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75497565 295 - 133195287 AGCCCCCCCCACCCCCACCccaggggcagtggctcactcctgtagtcccaacacttttgggaggcagaggcaagcagatcgcttgaactcaggagttcgagaccatcctggacaacatggagaaaccccatctctgcaaaatatacaaaaattagctggtgtggtggcatgttcctgtggtcccagctacttgggggggctgaggcaggaggatggcttgagactgggaggcggaggctgcggtgagccgagactgtgccactgcactccagcctgggtgacacagagagaccct i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73361270 295 - 125196307 agccccccccacccccaccccaggggcagtggctcactcctgtagtcccaacacttttgggaggcagaggcaagcagatcgcttgaactcaggagttcgagaccatcctggacaacatggagaaaccccatctctgcaaaatatacaaaaattagctggtgtggtggcatgttcctgtggtcccagctacttggggggcctgaggcaggaggatggcttgagactgggaggcggaggctgcagtgagccgagactgtgccactgcactccagcctgggtgacacagtgagaccct i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72193952 295 - 125710982 AGCCCCCCCCCACCCCACCccaggggcagtggctcactcctgtagtcccaacacttttgggaggcagaggcaagcagatcgcttgaactcaggagttcgagaccatcctggacaacatggagaaaccccatctctgcaaaatatacaaaaattagctggtgtagtggcatgttcctgtggtcccagctacttgggagggctgaggcaggaggatggcttgagactgggaggcggaggctgcagtgagccgagactgtgccactgcactccagcctgggtgacacagtgagactct i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75653014 288 - 121768101 ----CCCCATACACAGAAGCC-ggcgcagtggctcacacctataatcccaacac-tttgggaggccgaggcaagcaggtaacttgagctcaggagttccagaccatcctggacaacatggagaaaccccatctctacaaaatatacaaaaattagccggtgtggtggcatgtgcctgtggtcccagctacttgggggg-ctgaggtgagaggatcgcttgagcccaggaagcagaggctgcagtgagccaagattgcgctactgcactccagcctgggcgacacagtgagaacct i calJac3.chr12 C 0 C 0 e canFam3.chr4 27804486 80 + 88276631 I e mm10.chr14 24243034 24 + 124902244 I a score=13496.000000 s hg38.chr10_KI270825v1_alt 162444 5 + 188315 gtctc s panTro4.chr10 76540588 5 + 133524379 gtctc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76209372 5 - 133410057 gtctc i ponAbe2.chr10 C 0 M 222 s rheMac3.chr9 73937265 5 - 130959383 gtctc i rheMac3.chr9 C 0 I 2 s macFas5.chr9 75497860 5 - 133195287 gtctc i macFas5.chr9 C 0 I 2 s papAnu2.chr9 73361565 5 - 125196307 gtctc i papAnu2.chr9 C 0 I 2 s chlSab2.chr9 72194247 5 - 125710982 gtctc i chlSab2.chr9 C 0 I 2 s calJac3.chr12 75653302 5 - 121768101 gtctc i calJac3.chr12 C 0 C 0 e canFam3.chr4 27804486 80 + 88276631 I e mm10.chr14 24243034 24 + 124902244 I e nomLeu3.chr18 35144763 1527 + 104879549 M a score=13536.000000 s hg38.chr10_KI270825v1_alt 162449 9 + 188315 aaaaaaaca s panTro4.chr10 76540593 9 + 133524379 aaaaaaaca i panTro4.chr10 C 0 C 0 s rheMac3.chr9 73937272 9 - 130959383 aaaaaaaaa i rheMac3.chr9 I 2 C 0 s macFas5.chr9 75497867 9 - 133195287 aaaaaaaaa i macFas5.chr9 I 2 C 0 s papAnu2.chr9 73361572 9 - 125196307 aaaaaaaaa i papAnu2.chr9 I 2 C 0 s chlSab2.chr9 72194254 9 - 125710982 aaaaaaaaa i chlSab2.chr9 I 2 C 0 s calJac3.chr12 75653307 9 - 121768101 aaacaaaca i calJac3.chr12 C 0 I 243 e canFam3.chr4 27804486 80 + 88276631 I e mm10.chr14 24243034 24 + 124902244 I e ponAbe2.chr10 76209377 222 - 133410057 M e nomLeu3.chr18 35144763 1527 + 104879549 M a score=21140.000000 s hg38.chr10_KI270825v1_alt 162458 15 + 188315 aaa---GCCCCCAACACG s panTro4.chr10 76540602 15 + 133524379 aaa---GCCCCCAACACC i panTro4.chr10 C 0 C 0 s rheMac3.chr9 73937281 15 - 130959383 aaa---GCCCCCAACACG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75497876 15 - 133195287 aaa---GCCCCCAACACG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73361581 13 - 125196307 aag-----ccccaacaCG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72194263 18 - 125710982 aaaaaGGCCCCCAACACG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75653559 15 - 121768101 AAA---GCCCCCAACACA i calJac3.chr12 I 243 C 0 e canFam3.chr4 27804486 80 + 88276631 I e mm10.chr14 24243034 24 + 124902244 I e ponAbe2.chr10 76209377 222 - 133410057 M e nomLeu3.chr18 35144763 1527 + 104879549 M a score=33454.000000 s hg38.chr10_KI270825v1_alt 162473 19 + 188315 CCACTGTTTGCTGACACAC-- s panTro4.chr10 76540617 19 + 133524379 CCACAGTTTGGTGACACAC-- i panTro4.chr10 C 0 M 578 s rheMac3.chr9 73937296 19 - 130959383 CCACTGTTTGCTGACACAC-- i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75497891 19 - 133195287 CCACTGTTTGCTGACACAC-- i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73361594 19 - 125196307 CTACTGTTTGCTGACACAC-- i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72194281 19 - 125710982 CCACTGTTTGCTGACACAC-- i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75653574 19 - 121768101 CCACTGTTTGCTGACACAC-- i calJac3.chr12 C 0 C 0 s mm10.chr14 24243058 16 + 124902244 CCACTGACT-----CACATCA i mm10.chr14 I 24 C 0 e canFam3.chr4 27804486 80 + 88276631 I e ponAbe2.chr10 76209377 222 - 133410057 M e nomLeu3.chr18 35144763 1527 + 104879549 M a score=92265.000000 s hg38.chr10_KI270825v1_alt 162492 61 + 188315 CATGTCACCCTCTTCCCCAGGGGCTTCAGGTGGCATCTTGCCATACCAAATGCTGTCCTAA s rheMac3.chr9 73937315 61 - 130959383 CATGTCACCCTCTCCGCCAGGGGCTTCAGGTGGCATCTTGCCATACCAAATGCTGTCCTAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75497910 61 - 133195287 CATGTCACCTTCTCCGCCAGGGGCTTCAGGTGGCATCTTGCCATACCAAATGCTGTCCTAA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73361613 61 - 125196307 CATGTCACCCTCTCCCCCAGGGGCTTCAGGTGGCATCTTGCCATACCAAATGCTGtcctaa i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72194300 61 - 125710982 CATGTTACCCTCTCCCCCAGGGGCTTCAGGTGGCATCTTGTCATACCAAATGCTGTCCTAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75653593 59 - 121768101 CATTTCACCCTCTCCCCTAGGGGCTCCAGGTGGCATCCTGCCATACCAAATGCTGTCCt-- i calJac3.chr12 C 0 C 0 s mm10.chr14 24243074 61 + 124902244 CACGTCACACTAGTCACCAAAGCCTCCGGATGTTGTCTTGCCGTATCAAGTGCTACCCCAA i mm10.chr14 C 0 C 0 e canFam3.chr4 27804486 80 + 88276631 I e ponAbe2.chr10 76209377 222 - 133410057 M e nomLeu3.chr18 35144763 1527 + 104879549 M e panTro4.chr10 76540636 578 + 133524379 M a score=1314.000000 s hg38.chr10_KI270825v1_alt 162553 1 + 188315 C s ponAbe2.chr10 76209599 1 - 133410057 C i ponAbe2.chr10 M 222 C 0 s rheMac3.chr9 73937376 1 - 130959383 C i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75497971 1 - 133195287 C i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73361674 1 - 125196307 c i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72194361 1 - 125710982 C i chlSab2.chr9 C 0 C 0 s mm10.chr14 24243135 1 + 124902244 T i mm10.chr14 C 0 C 0 e canFam3.chr4 27804486 80 + 88276631 I e nomLeu3.chr18 35144763 1527 + 104879549 M e calJac3.chr12 75653652 0 - 121768101 C e panTro4.chr10 76540636 578 + 133524379 M a score=233386.000000 s hg38.chr10_KI270825v1_alt 162554 140 + 188315 ttttttctttcttttttttt--gagaaggagtcttgctctgtcacctaggctggaatccaagggcaccatgtcaactcactgtaacctccac-ttcccagattcaagtgattctcctgcctcagcctcccaagtagctgggac s ponAbe2.chr10 76209600 142 - 133410057 ttttttctttcttttttttttcgagaaggagtcttgctctgtcacctaggctggaatgcaagggcaccatgtcaactcactgcaacgtccac-ttcccagattcaagtgattctcctgcctcagcctcccaagtagctgggac i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73937377 139 - 130959383 ttttttctttctttttctt---gagacggagtcttgctctgtcacccaggctggaatgcagtggcaccatgtcggctcactgcaacctccac-ttcccagagtcaagtgattctcctgcttcagcctcccaagtagctgggac i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75497972 139 - 133195287 ttttttctttctttttctt---gagacggagtcttgctctgtcacccaggctggaatgcagtggcaccatgtcggctcactgcaacctccac-ttcccagagtcaagtgattctcctgcttcagcctcccaagtagctgggac i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73361675 140 - 125196307 ttttttctttctttttctt---gagacggagtcttgctctgtcacccaggctggaatgcagtggcaccatgtcggctcactgcaacctccactttcccagagtcaagtgattctcctgcttcagcctcccaagtagctgggac i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72194362 139 - 125710982 ttttttctttcttttcctt---gagacggagtcttgctctgtcacccaggctggaatgcagtggcaccatgtcggctcactgcaacctccac-ttcccagagtcaagtgattctcctgcttcagcctcccaagtagctgggac i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75653652 135 - 121768101 -tttttctttattttttt----aagacagagtcttgctttgtcacccaggctgaaatgcagcggcacagtgtcagctcact--aacctccaa-ttcccagattcaagcaattttcctgcctcagcctcccaagtagctgggaa i calJac3.chr12 C 0 C 0 e canFam3.chr4 27804486 80 + 88276631 I e mm10.chr14 24243136 0 + 124902244 C e nomLeu3.chr18 35144763 1527 + 104879549 M e panTro4.chr10 76540636 578 + 133524379 M a score=388277.000000 s hg38.chr10_KI270825v1_alt 162694 166 + 188315 tacaggcgcccacaaccacgcccagttaatttttgtatttttattagagacggggtttcaccatgttggccaggctggtctcgaactcctggccttaagagatctgcccgcctcggcctcccaaagtgctgggattacaggcatgagccaccacacccaaccAGC-G s panTro4.chr10 76541214 165 + 133524379 tacaggcgcccacaaccacgcccaggtaattgttgtatttttattagggacggggtttcaccatgttggccagggtggttttgaactcctggccttaagagatctgcccgcctcggcctcccaaagtgctggaattacaggcatgagccaccacacccaaccAG--G i panTro4.chr10 M 578 C 0 s ponAbe2.chr10 76209742 165 - 133410057 tacaggcacctacaaccacgcccagcta--ttttgtatttttagtagagacggggtttcaccatgttggccaggctggtctcgaactcctggccttaagagatctgcccgcctcggcctcccaaagtgctgggattacaggcatgagccaccatacccagccAACTT i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73937516 166 - 130959383 tacaggcgcccaccaccacgcccagctaatttttgtatttttagtacaaacggggtttcaccatgttggccaggctggtctcgaactcctggccttaagtgatctgcctgcctcagcctcccaaagtgctgggattacaggcatgagccaccacatccagccAAC-T i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75498111 166 - 133195287 tacaggcgcccaccaccacgcccagctaatttttgtatttttagtacaaacggggtttcaccatgttggccaggctggtctcgaactcctggccttaagtgatctgcctgcctcagcctcccaaagtgctgagattacaggcatgagccaccacatccagccAAC-T i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73361815 166 - 125196307 tacaggcgcccaccaccacgcccagctaatttttgtatttttagtacaaacggggtttcaccatgttggccaggctggtctcgaactcctggccttaagtgatctgcctgcctcagcctcccaaagtgctgggattacaggcatgagccaccacatccagccaac-t i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72194501 166 - 125710982 tacaggcgcccgccaccacgcccagctaatttttgtatttttagtacaaacggggtttcaccatgttggccaggctggtctcgaactcctggccttaagtgatctgcccgcctcagcttcccaaagtgctgggattacaggcatgagccaccacatccagccAAC-T i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75653787 166 - 121768101 tacaggcgcccatcaccacacccagctaatttttgtatttttagtagagacagggtttcaccatattggccaggctggtctcgaactcctggcctcaagtgatctgcctgcctcagcctcccaaagtgctgggattacaggcatgagccactgcacccagccAAC-T i calJac3.chr12 C 0 C 0 e canFam3.chr4 27804486 80 + 88276631 I e mm10.chr14 24243136 0 + 124902244 C e nomLeu3.chr18 35144763 1527 + 104879549 M a score=3276.000000 s hg38.chr10_KI270825v1_alt 162860 1 + 188315 T s panTro4.chr10 76541379 1 + 133524379 T i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76209907 1 - 133410057 T i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73937682 1 - 130959383 T i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75498277 1 - 133195287 T i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73361981 1 - 125196307 t i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72194667 1 - 125710982 T i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75653953 1 - 121768101 T i calJac3.chr12 C 0 C 0 s mm10.chr14 24243136 1 + 124902244 T i mm10.chr14 C 0 C 0 e canFam3.chr4 27804486 80 + 88276631 I e nomLeu3.chr18 35144763 1527 + 104879549 M a score=1041536.000000 s hg38.chr10_KI270825v1_alt 162861 364 + 188315 TTTTCTAATGCAttaagtaaaatgaacttaacttctccttgaaaagtatttttctaaggatttcatgaccctctccaaagtcacataactctgcattgtggtaaaactggggtctgaaatcaatgccctaGGGG------ATAAAATCCAAACCCTAATCTCTGCC-TT-CCTTAGAGGTCAAGACTAGCTCCTAGAACTTCAGCCCCATGAGGCCCCACA------TTCTCCACCAGACACGGAAAGGGTGAGACCTAATTAATGGCAATTGATCC----ATCAATCAAT----TTTCAGAGATTAAGGCGAGCGTTGATTCACATGCTTCCCAACGC---AGACTTCCAGTCTGTAC---TAAGTTCTGTGCTT--TACGAAAGACTTTCAG s panTro4.chr10 76541380 364 + 133524379 TTTTCTAATGCATTAAATAAAATGAACTTAACTTCTCCTTGAAAAGTATTTTTCTAAGGATTTCATGACCCTCTCCAAAGTCACATAACTCTGCATTGTGGTAAAACTGGGGTATGAAATCAATGCCCTAGGGG------ATAAAATCCAAACCCTAATCTCTGCC-TT-CCTTAGAGGTCAAGACTAGCTCCTAGAACTTCAGCCCCATGAGGCCCCACA------TTCTCCACCAGACACGGAAAGGGTGAGACCTAATTAATGGCAATTGATCC----ATCAATCAAT----TTTCAGAGATTAAGGCAAGCGTTGATTCACATGCTTCCCAATGC---AGACTTCCAGTCTGTAC---TAAGTTCTGTGCTT--TACGAAAGACTTTCAG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76209908 364 - 133410057 TTTTCTAATGCATTAAATAAAATGAACTTAACTTCTCCTTGAAAAGTATTTTTCTAAGGATTTCATGACCCTCTCCAAAGTCACATAACTCTGCATTGTGGTAAAACTGGGGTCTGAAATCAATGCCCTAGGGG------ATAAAATCCAAATCCTAATCTCTGCC-TT-CCTTAGAGGTCAAGACTAGCTCCTAGAACTTCAGCCCCATGAGGACCCACA------TTCTCCACCAGGCACGCAAAGGGTGAGACCTAATTAATGGCAATTGATCC----ATCAATCAAT----CTTCAGAGATTAAGGCGAGCGTTGATTCACATGCTTCCCAACGC---AGACTTCCAGTCTGTAC---TAACTTCTGTGCTT--TAGGAAAGACTTTCAG i ponAbe2.chr10 C 0 C 0 s rheMac3.chr9 73937683 373 - 130959383 TTTTTTAATGTATTAAATAAAATGAACTTAACTTCTCCTTGAAAATTATTTTTCTAAGGATTTCATGACCCTCTCCAAAGTCACAGAACTCTGCATTGTGGTAAAACTGGGGTCTGAAATCAATGCCTGAGGGG------ATAAAATCCAAACCCTAATCTCTGCC-TT-CCTTAGAGGTCACAACTAGCTCCTGGAACTTCAGCCCCATGAGGCCCCACA------TTCTCCACCAGGCACGGAAAGGATGAGACCTAATTAATGGCAATTGATCCATCAATCAATCTAT----TCTCAGAGATTAAGGTGAGCATTGATTCACATGCTTCCAAACGC---AGACTTCTAGCCTGTACTCTTAACTTCTGTGCTTCCTAGGAAAGACTTCCAG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75498278 373 - 133195287 TTTTTTAATGTAttaaataaaatgaacttaacttctccttgaaaattatttttctaaggatttcatgaccctctccaaagtcacagaactctgcattgtggtaaaactggggtctgaaatcaatgcCTGAGGGG------ATAAAATCCAAACCCTAATCTCTGCC-TT-CCTTAGAGGTCACAACTAGCTCCTGGAACTTCAGCCCCATGAGGCCCCACA------TTCTCCACCAGGCACGGAAAGGATGAGACCTAATTAATGGCAATTGATCCATCAATCAATCTAT----TCTCAGAGATTAAGGTGAGCATTGATTCACATGCTTCCAAACGC---AGACTTCTAGCCTGTACTCTTAACTTCTGTGCTTCCTAGGAAAGACTTCCAG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73361982 373 - 125196307 ttttttaatgtattaaataaaatgaacttaACTTCtccttgaaaattatttttctaaggaTTTCATGACCCTCTCCAAAGTCACAGAACTCTGCATTGTGGTAAAACTGGGGTCTGAAATCAATGCCTGAGGGG------ATAAAATCCAAACCCTAATCTCTGCC-TT-CCTTAGAGGTCACGACTAGCTCCTAGAACTTCAGCCCCATGAGGCCCCACA------TTCTCCACCAGGCACGGAAAGGATGAGACCTAATTAATGGCAATTGATCCATCAATCAATCTAT----CCTCAGAGATTAAGGTGAGCATTGATTCACATGCTTCCAAACGC---AGACTTCTAGCCTGTACTCTTAACTTCTGTGCTTCCTAGGAAAGACTTCCAG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72194668 369 - 125710982 TTTTCTAATGTAttaaataaaatgaacttaacttctccttgaaaattatttttctaaggatttcatgaccctctccaaagtcacagaactctgcattgtggtaaaactggggtctgaaatcaatgcCTGAGGGG------ATAAAATCCAAACCCTAATCTCTGCC-TT-CCTTAGAGGTCACGACTAGCTCCTAGAACTTCAGCCCCATGAGGCCCCACA------TTCTCCACCAGGCATGGAAAGGATGAGACCTAATTAATGGCAATTGACCC----ATCAATCTAT----TCTCAGAGATTAAGGTGAGCATTGATTCACATGCTTCCCAACGC---AGACTTCTAGCCTGTACTCTTAACTTCTGTGCTTCCTAGGAAAGACTTCCAG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75653954 365 - 121768101 TTTTCTAATGTATTAAATAATATG-----AACTTCTCCCTGAAAATTATTTTTCTAAGGATTTCATGACCCTCTCCAAAGCCACAGAACTCTGCACTGTGGTAAAACTGGGGTCTGAAATCAATGCCCTAGGTG------ATAAAATCCAAACCCTAACCTCTGCC-TTCCCTTAGAGGTCTAGATTAGTTCCTAGAACTTCAGCCCCAGGAGGCCTTATA------TTCTCCAGCAGGCACAGAAAAGGCAAGACCTAATTAATGGCAATTGATCC----AATAATCAAT----TTCCAGAAATTAAAGCCAGTGTTGATTCATATGCTTCCCAAAGT---AGACTTCTAGTCTGTACTCTTAACTTTTGTGCTTCCTAGAAAAGACTTCCAG i calJac3.chr12 C 0 C 0 s mm10.chr14 24243137 364 + 124902244 TCTTCTAACCTATTAAATAAAACAAACTTAAC--CTCCTTGACAAGTATTTTTCTAAGGATTTCATGAGCCTCTTTGAAGCAATAAAATTCTGAAGTGTGGGGAAATGGATTTTAAAAATCACAGCCCTAGGGA--------TAAATCTCAGCCTTATGGTATCCCATT-CCTTAGAGGGCAAGAGACGAACCTTAAAGATCAGACC--AGAGGTCCCACC------TTCTCTACAGGGCATG---AGGGATGTACTTAACACATGGCCATCTGTCC----TCTAGTTTGTGGTAGTCTAGATATTAATCCTAGGGCTGATACTAGCACATCCCCGTGA---GGACTTCTTGGCTGCCCTC-TAACTTCTGTGCTTCCTCAGACGGACTTCTAG i mm10.chr14 C 0 C 0 s canFam3.chr4 27804566 362 + 88276631 TTCTCTAAAGCGTTAACTAAAATGAACGTAACTCCCCCCTAACAACTGTTTTTCTGAGGATTTCATGAGCCCTTGCAAAGCCACAGAATTCTGCTTTGTGGTAACATTAGCGTCTTAAATCACTGCCCTGGGTGGGGGGTGGGGAATCCCAACCCTACCCCATCTC-TT-CCTTGGAGGTCAAGACCAGCTCCTACAACCTCAGCCCCAGTGAGCCCCCCGCCCCCCTTCTCTGCCAGGCACGGAGAAGGAGAG----AATTAATGGCAATTCATCC----TTCTA---------TTCCAGATATTAAAGCCAGTGCTGATTCCAACACATCCCAAGGAGGGAGGACGTGGGTCTGCACTC-TAATGTCTGCACTTCCTCGA------------ i canFam3.chr4 I 80 C 0 e nomLeu3.chr18 35144763 1527 + 104879549 M a score=5329988.000000 s hg38.chr10_KI270825v1_alt 163225 1510 + 188315 AAACAGATCTT-----AACTTCTTCATTCAGagatagattagatagatacatagataCAATTAAAAAG-AAAAAAATTACTTTGTTGAGATC-CCCTCTGTCCTTATCCTC-ATGGCCACATCTGACAGTCCCTTCCTAGCATCTCCCAAAGCACTATCCCAGGAAAGGACTAGGTTTGCCCAGTAACTCTGACATGACCACAACTG---------------GGGGGAAAGAATGCAGGTTTGAGGGACAGAGATGC--AAGTCAGA-AGCTCAAAGTGGAGACGGGAGGGCCACCAATGAAATGACCTgctgtgtggccagcaatttagtctctctg----tcagtttcctgcagctacaaaaattgaggttaagatggccaac--gtaag--agagctgttaccaggaATGCCTTATAAAATCATTCCCTTAATAAGTGGGGCTTTTAACAGCCAAATAAATGGGTCCCATCAGCCTTTGACCTTCAGGTTGCTAAGGGCAG------TTTCTCAGCCCTCTCGGTTCACTTGTTTTTCTTTTATACATATATCCTTATTTATTTTTACTGTACCTATCGATTCACTGTTAAAACAGGG---ACAAGACCTAG-AAAGATGGCACTT--TGTTT---CCTGGCTCTGAACAAGT---TAAATCAAACAATAGGTTATAATTCAAAATTCCTGGTGCCCAATACTTTCTGAGCATTttaaccactccaagccagagttttctctctggcaaa----g----aataacagaaagctcacatagtggcaacgacaactgaacgtgataaagcagagcgcctgccacaacagtagatgcccaataaatgctagttc-tCCTCCTCCCTCAGTGCCATGTCTTCTTCCTCCAGCTGCCTTGTCTAAAAAGGCTGGCT-TCCACACTCCACGGCCAGGCCAGGACAAGCCTACCACTTGTCAGAAACTCCCGCCAGTATCCGTTCCTGCACCCAGACACACACTTACAAATCAGTCATCCCCAAGACCAAAGACACAGGGGTTCCAAAAGGCACCCTCAAGGGAACCAGTCACCAGCCTTCCTCGTTAAGCAGCTCTGTGCTCTCAGGGAGAGAACTTAGCCCCAGCAGCCACTACTAGGATTTTCCCATGGTGCAATGCAACTTCCCCAACTTTTCCGGGCC--CAGTTTCCAAAGAAACCCAGGCAGGCGTTGTGCACAATCAGCCACCAGTCTGGGAGAG-ACTGGGCTCTGAG----CAGAGAA----AAAGGAGCTGGGACAGCCAGAAAATGAAAAAGCAGTTGTGGCCC----CGGCACAGGATGGCAGCGACCAAAACTTAAGAGTAGGGGTCCTGGCCCAAGTCCCATTCTTCTGGACGGTACCCTTGGTTAAAGGCTAGCACAGGGTGCCAAA--GCTAGCGGACGGTGAGGAGCCTCAGAAAAGGGACTGATGGACATCC-TCCGAGGT--------ACCCCCTACCCGCTACTGGACCTGGTGGCCCCC-GG-GGACCCTGTCGTCGAGGCACCTGAGAGTG-------AAGGCCTTCAGC-GGGGGG--CATTGTTCACAGCGAACGGCGGGACTGGGGGA- s panTro4.chr10 76541744 1510 + 133524379 AAACAGATCTT-----AACTTCTTCATTCAGAGATAGATTAGATAGATACATAGATACAATTAAAAAG-AAAAAAATTACTTTGTTGAGATC-CCCTCTGTCCTTATCCTC-ATGGCCACATCTGACAGTCCCTTCCTAGCATCTCCCAAAGCACTATCCCAGGAAAGGACTAGGTTTGCCCAGTAACTCTGACATGACCACAACTA---------------GGGGGAAAGAATGCAGGTTTGAGGGACAGAGATGC--AAGTCAGA-AGCTCAAAGTGGAGACGGGAGGGCCACCAATGAAATGACCTgctgtgtggccagcaatttagtctctctg----tcagtttcctgcagctacaaaaattgaggttaagatggccaac--ataag--agagctgttaccaggaATGCCTTATAAAATCATTCCCTTAATAAGTGGGGCTTTTAACAGCCAAATAAATGGGTCCCATCAGCCTTTGACCTTCAGGTTGCTAAGGGCAG------TTTCTCAGCCCTCTCGGTTCACTTGTTTTTCTTTTATACATATATCCTTATTTATTTTTACTGTACCTATCGATTCACTGTTAAAACAGGG---ACAAGACCTAG-AAAGATGGCACTT--TGTTT---CCTGGCTCTGAACAAGT---TAAATCAAACAATAGGTTATAATTCAAAATTCCTGGTGCCCAATACTTTCTGAGCATTttaaccactccaagccagagttttctctctggcaaa----g----aataacagaaagctcacatagtggcaacgacaactgaacgtgataaagcagagcgcctgccacaacagtagatgcccaataaatgctagttc-tCCTCCTCCCTCAGTGCCATGTCTTCTTCCTCCAGCTGCCTTGTCTAAAAAGGCTGGCT-TCCACACTCCACGGCCAGGCCAGGACAAGCCTACCACTTGTCAGAAACTCCCGCCAGTATCCGTTCCTGCACCCAGACACACACTTACAAATCAGTCATCCCCAAGACCAAAGACACAGGGGTTCCAAAAGGCACCCTCAAGGGAACCAGTCACCAGCCTTCCTCGTTAAGCAGCTCTGCGCTCTCAGGGAGAGAACTTAGCCCCAGCAGCCACTACTAGGATTTTCCCATGGTGCAATGCAACTTCCCCAACTTTTCCGGGCC--CAGTTTCCAAAGAAACCCAGGCAGGCATTGTGCACAATCAGCCACCAGTCTGGGAGAG-ACTGGGCTCTGAG----CAGAGGA----AAAGGAGCTGGGACAGCCAGAAAATGAAAAAGCAGCTGTGGCCC----CGGCACAGGATGGCAGCGACCAAAACTTAAGAGTAGGGGTCCTGGCCCAAGTCCCATTCTTCTGGACGGTACCCTTGGTTAAAGGCTAGCACAGGGTGCCAAA--GCTAGCGGACGGTGAGGAGCCTCAGAAAAGGGACTGATGGACATCC-TCCGAGGT--------ACCCCCTACCCGCTACTGGACCTGGTGGCCCCC-GG-GGACCCTGTCGTCGAGGCACCTGAGAGTG-------AAGGCCTTCAGC-GGGGGG--CATTGTTCACAGCGAACGGCGGGACTGGGGGA- i panTro4.chr10 C 0 I 488 s ponAbe2.chr10 76210272 1510 - 133410057 AAACAGATCTT-----AACTTCTTCATTCAGAGATAGATTAGATAGATACATAGATACAATTAAAAAG-AAAAAAA-TACTTTGTTGAGATT-CCCTCTGTCCTTATCCTC-ATGGCCACATCTGACAGTCCCTTACTAGCATCTCCCAAAGCACTATAACAGGAAAGGACTAGGTTTGCCCAGTAACTCTGACATGACCACAACTG---------------GGAGGAAAGAATGCAGGTTTGAGGGACAGAGATGC--AAGTCAGA-AGCTCAAAGTGGAGACAGGAGGGCCACCAATGAAATGACctgctgtgtggccagcaatttagtctctctg----tcagtttcctgcagctacaaaaattgaggttaagatggccaat--ataag--agagctgttaccaggaATGCCTTATAAAATCATTCCCTTAATAAGTGGGGCTTTTAACAGCCAAATAAATGGGTCCCATCAGCCTTTGACCTTCAAGTTGCTAAGGGCAG------TTTCTCAGCCCTCTCGGTTCACTTGTTTTTCTTTTATACATATGTCCTTATTTATTTTTACTGTACCTATCGATTCACTGTTAAAACAGGG---ACAAGACCTAG-AAAGATGGCACTT--TGTTT---CCTGGCTCTGAACAAGT---TAAATCAAACAATAGGTTATAATTCAAAATTCCTGGTGCCCAATACTTTCTGAGCATTttaaccactccaagccagagttttctctctggcaaa----g----aataacagaaagctcacatagtggcaacgacaaatgaacgtgataaagcagagcgcctgccacaatagtagatgcccaataaatgctagttc-tactCCTCCCTCAGTGCCATGTCTTCTTCCTCCAGCTGCCTTGTCT-AAAAGGCTGGCT-TCCACACTCCGCGGCCAGGCCAGGACAAGCCTACCACTTGTCACAAACTCCCGCCAGTATCCGTTCCTGCACCCAGACACACACTTACAAATCAGTCATCCCCAAGACCAAAGACACAGGGGTTCCAAAAGGCACCCTCAAGGGAACCAGTCACCAGCCTTCCTCGTTAAGCAGCTCTGTGCTCTCAGGGAGAGAACTTAGCCCCAACAGCCGCTACTAGGATTTTCCCATGGTGCAATGCAACTTCCCCAACTTTTCCGGGCC--CAGTTTTCAAAGAAACCCAGGCAGGCATTGTGCACAATCAGCCACAAGTCTAGGAGAG-ACTGGGCTCTGAG----CAGAGGA----AAAGGAACTGGGACAGCCAGAAAATGAAAAGGCAGCGGTGGCCC----CGGCACACGATGGCAGCGACCAAAATTTAAGAGTAGGGGTCCTAGCCCAGGTCCCATTCTTCTAGACGGTACCCTTGGTTAAAGGCTAGCACAGGGTCCCAAAGGGCTAGCGGATGGTGAGAAGCCTCAGAAAAGGGACTGATGGACATCC-TCCGAGGT--------ACCCCCTACCCGCTACTGGACCTGGTGGCCCCC-GG-GGACCCTGTCGCCGAGGCACCTGAGAGTG-------AAGGCCTTCAGC-GGAGGG--CATTGTTCACAGCGAACGGCGGGACTGGGGGA- i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35146290 1508 + 104879549 AAACAGATCTT-----AACTTCTTCATTCAGagatagattagatagatacatagataCAATTAAAAAG-AAAAAAATTACTTTGTTGAGATC-CCCTCTGTCCTTATCCTC-ATGGCCACATCTGACAGTCCCTTCCTAGCATCTCCCAAAGCACTATCCCAGGAAAGGACTAGGTTTGCCCAGCAACTCTGACATGACCACAACTG---------------GGGGGAAAGAACGCAGGTTTGAGGGACAGAGATGC--AAGTCAGA-AGCTCAAAGTGGAGACAGGAGGGCCACCAATGAAATGACCTgctgtgtggccagcagtttagtctctctg----tcagtttcctgcagctataaaaagtgaggttaagatggccaat--ataag--agagctgttaccaggaATGCCTTATAAAATCATTCCCTTAATAAGTGGGGCTTTTAACAGCCAAATAAATGGGTTCCATCAGCCTTTGACCTTCAAGTTGCTAAGGGCAG------TTTCTCAGCCCTCTCGGTTCACTTGTTTTTCTTTCATACATATATCTTTATTTATTTTTACTATACCTATCGATTCACTGTTAAAACAAGG---ACAAGACCTAG-AAAGATGGCACTT--TGTTT---CCTGGCTCTGAACAAGT---TAAATCCAAAAATAGGTTATAATTCAAAATTCCTGGTGCTCAATACTTTCTGAGCATTttaaccactccaagccagagttttctccctggcaaa----g----aacaacagaaagctcacacagtggcaacgacaattgaacgtgataaagcagagcgcctgccacaatagtagctgcccaataaatgctagttc-tCCTCCTCCCTTAGTGCCATGTCTTCTTCCTCCACCTGCCTTGTCT-AAAAGGTTGGCT-TCCACACTCCGCGGCCAGGCCAGGACAAGCCTACCACTTGTCAGAAACTCCCGCCAGTATCCGTTCTCGCACCCAGACACACACTTACAAATCAGTCATCCCCAAGACCAAAGACACA-GGGTTCCAAAAGACACCCTCAAGGGAACCAGTCACCAGCCTTCCTCCTTAAGCAGCTCGGTGCTCTCAGGGAGAGAACTTAGCCCCAGCAGCCACTACTAGGATTTTCCCATGGTGCAATGCAACTTCCCCAACTTTTCCGGGCCCACAGTTTCCAAAGAAACCCGGGCAGGCACTGTGCACAATCAGCCACAAGTCTGGGCGAG-ACTGGGCTCTGAA----CAGAGGA----AAGGGAGCTGGGACAGCCAGAAAATGAAAAGGCAGCGGCGGCCC----CGGCACAGGAGGGCAGGGACCAAAATTTAAGAGTAGGGGTCCTGGCCCAGGTCCCATTCTTTTAGGCGGTACCCTTGGTTAAAGGCTAGCAGAGGGTCCCAAAGGACTAGCGGATGGTGAGGAGCCTCAGAAAAGGGACTGATGGGCATCC-TCCGAGGT--------ACCCCCTACCCGCTACTGGACCTGGTGGCCCCC-GG-GGACCCTGCC-----GGCACCTGAGAGTG-------AAGGCCTTCAGCGGGGGGG--CATTGTTCACAGCGCACGGCGGGACTGGAGGA- i nomLeu3.chr18 M 1527 I 18 s rheMac3.chr9 73938056 1497 - 130959383 AAACAGATCTT-----AACTTCTTCCTTCAGAGATAGAT----TAGATACACAGATACAATTAAAAA---AAAAAATTACTTTGTTGGGATC-CCCTCTGTCCTTGTCCTC-ATGGCCACATCTGACAGTCCCTTCCTAGCATCTCCCAAAGCACTATCCCAGGAAAGGATTAGGTTTGCCCAGCAACTCTGACATGACCACAACTG---------------GGGGGAAAGAATGCAGGTTTGACGGACAGAGATGC--AAGTCAGA-AGCTCAAAGTGGAGACAGGAGGACCACCAATGAAATGACCTGCTGTGTGGCCAGCAGTTTAGTCTCTCTG----CCAGTTTCCTGCAGCTATAAAAAGTGAGGTTAAGATGGCC-------AAG--AGAGCTGTTACCAGGAACGGCTTATAAAATCATTCCCTTAATAAGTGGAGCTTTTAACAGCCAAATAAACGGGTCCCATCAGCCTTTGACCTTCAAGTTGCTAAGGGCAA------TTTCTCAGCCCTCTCGGTTCACTTGTTTTTCTTTTATACATATATCTTTATTTATTTTTACTGTACCTATCGATTCACTGTTAAAACAAGG---ACAAGACCTAG-AAAGATGGCACTT--TGTTT---CCTGGCTCTGAACAAGT-------TCAAACAATAGGTTATAATTCAAAATTCCTGGTCCCCAATACTTTCTGGGCATTttaaccactccaagtcagagtcttctctctggcaaa----g----aataacagaaagctcacatagtggcaacgacaattgaacgtgacaaggcagagtgcctgccacaataatagatgcccaataaatgcttgttc-tcttCCTCCCTCAGTGCCATGTCTTCTTCCTCCAGCTGCCTTGTCT-GAAAGGCTGGC--TCCACACTCCGCGACCAGACCAGGACAAGCCTACCACTTGTCAGAAACTCCCGCCAGTATCCGTTCTTGCCCCGAAACACACACTTACAAATCAGTCATCCCCAAGACCAAGGACACAGGGGTTCCAAAAGGCACCCCCAAGGGAACCAGTCACCAGCCTTCCTCCTTAAGCAGCTCGGTGCTCTCAGGGAGGGAACTTAGCCCCAACAGCCACTACTAGGATTTTCCCATGGTGCAATGCAACTTCCCCAACTTTTCAGGGCCCACAGTTTCCAAAGAAACCCAGGCAGGCATTGTGCACAATCAGCCACAAGTCCGGGCGAG-ACTGGGCTCTGAG----CAGAGAA----AAGGGAGCTGGGACAGCCAGAAAATGAAAAGGCAGCGGTGGCCC----CGGCACAGGATGGCAGGCACCAAAATTTAAGAGTATGGGTCCTGGCCCAGGTCCCATTCTTTTAGACGTTATCCTTGGTTAAAGGCTAGCACAGGGTCCCAAAAGACTAGCGGGTGGTTAGGAGCCTCACAAAAGGGACTGATGAACATCC-TTCGAGGT--------ACCCCCTACCCGCTACTGGACCTGGTGGCCTCC-GG-GGACCCTGCCGCCGAGGCACCTGAGGGTG-------AAGGCCTTCAGC-TGGGGG--CATTGTTCACAGCGAACGGCGGGACTTGGGGA- i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75498651 1502 - 133195287 AAACAGATCTT-----AACTTCTTCCTTCAGAGATAGAT----TAGATACACAGATACAATTAAAAA---AAAAAATTACTTTGTTGGGATC-CCCTCTGTCCTTGTCCTC-ATGGCCACATCTGACAGTCCCTTCCTAGCATCTCCCAAAGCACTATCCCAGGAAAGGATTAGGTTTGCCCAGCAACTCTGACATGACCACAACTG---------------GGGGGAAAGAATGCAGGTTTGACGGACAGAGATGC--AAGTCAGA-AGCTCGAAGTGGAGACAGGAGGACCACCAATGAAATGACCTGCTGTGTGGCCAGCAGTTTAGTCTCTCTG----CCAGTTTCCTGCAGCTATAAAAAGTGAGGTTAAGATGGCCAAT--ATAAG--AGAGCTGTTACCAGGAACGGCTTATAAAATCATTCCCTTAATAAGTGGAGCTTTTAACAGCCAAATAAACGGGTCCCATCAGCCTTTGACCTTCAAGTTGCTAAGGGCAA------TTTCTCAGCCCTCTCGGTTCACTTGTTTTTCTTTTATACATATATCTTTATTTATTTTTACTGTACCTATCGATTCACTGTTAAAACAAGG---ACAAGACCTAG-AAAGATGGCACTT--TGTTT---CCTGGCTCTGAACAAGT-------TCAAACAATAGGTTATAATTCAAAATTCCTGGTCCCCAATACTTTCTGGGCATTttaaccactccaagtcagagttttctctctggcaaa----g----aataacagaaagctcacatagtggcaacgacaattgaacgtgacaaggcagagtgcctgccacaataatagatgcccaataaatgcttgttc-tcttCCTCCCTCAGTGCCATGTCTTCTTCCTCCAGCTGCCTTGTCT-GAAAGGCTGGC--TCCACACTCCGCGACCAGACCAGGACAAGCCTACCACTTGTCAGAAACTCCCGCCAGTATCCGTTCTTGCCCCGAAACACACACTTACAAATCAGTCATCCCCAAGACCAAGGACACAGGGGTTCCAAAAGGCACCCCCAAGGGAACCAGTCACCAGCCTTCCTCCTTAAGCAGCTCGGTGCTCTCAGGGAGGGAACTTAGCCCCAACAGCCACTACTAGGATTTTCCCATGGTGCAATGCAACTTCCCCAACTTTTCAGGGCCCACAGTTTCCAAAGAAACCCAGGCAGGCATTGTGCACAATCAGCCACAAGTCCGGGCGAG-ACTGGGCTCTGAG----CAGAGGA----AAGGGAGCTGGGACAGCCAGAAAATGAAAAGGCAGCGGTGGCCC----CGGCACAGGATGGCAGGCACCAAAATTTAAGAGTATGGGTCCTGGCCCAGGTCCCATTCTTTTAGACGTTATCCTTGGTTAAAGGCTAGCACAGGGTCCCAAAAGACTAGCGGGTGGTTAGGAGCCTCACAAAAGGGACTGATGAACATCT-TTCGAGGT--------ACCCCCTACCCGCTACTGGACCTGGTGGCCCCC-GG-GGACCCTGCCGCCGAGGCACCTGAGGGTG-------AAGGCCTTCAGC-TGGGGG--CATTGTTCACAGCGAACGGCGGGACTTGGGGA- i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73362355 1504 - 125196307 AAACAGATCTT-----AACTTCTTCCTTCAGAGATAGAT----TAGATACACAgatacaattaaaaag--aaaaaattactttgttGGGATC-CCCTCTGTCCTTGTCCTC-ATGGCCACATCTGACAGTCCCTTCCTAGCATCTCCCAAAACACTATCCCAGGAAAGGATTAGGTTTGCCCAGCAACTCTGACATGACCACAACTG---------------GGGGGAAAGAATGCAGGTTTGACGGACAGAGATGC--AAGTCAGA-AGCTCAGAGTGGAGACAGGAGGACCACCAATGAAATGACCTGCTGTGTGGCCAGCAGTTTAGTCTCTTTG----CCAGTTTCCTGCAGCTATAAAAAGTGAGGTTAAGATGGCCAAT--ATAAG--AGAGCTGTTACCAGGAACGGCTTATAAAATCATTCCCTTAATAAGTGGAGCTTTTAACAGCCAAATAAACGGGTCCCATCAGCCTTTGACCTTCAAGTTGCTAAGGGCAA------TTTCTCAGCCCTCTCGgttcacttgtttttcttttatacatatatctttatttatttttactgtacctatCGATTCACTGTTAAAACAAGG---ACAAGACCTAG-AAAGATGGCACTT--TGTTT---CCTGGCTCTGAACAAGT-------TCAAACAATAGGTTATAATTCAAAATTCCTGGTCCCCAATACTTTCTGGGCATTTTAACCACTCCAAGTCAGAGTTTTCTCTCTGGCAAA----G----AATAACAGAAAGCTCACATAGTGGCAACGACAATTGAACGTGACAAGGCAGAGTGCCTGCCACAATAATAGATGCCCAATAAATGCTTGTTC-TCTTCCTCCCTCAGTGCCATGTCTTCTTCCTCCAGCTGCCTTGTCT-GAAAGGCTGGCT-TCCACACTCCGCGACCAGACCAGGACAAGCCTACCACTTGTCAGAAACTCCCGCCAGTATCCGTTCTTGCCCCGAAACACACACTTACAAATCAGTCATCCCCAAGACCAAGGACACAGGGGTTCCAAAAGGCACCCCCAAGGGAACCAGTCACCAGCCTTCCTCCTTAAGCAGCTCGGTGCTCTCAGGGAGGGAACTTAGCCCCAACAGCCACTACTAGGATTTTCCCATGGTGCAATGCAACTTCCCCAACTTTTCAGGGCCCACAGTTTCCAAAGAAACCTAGGCAGGCATTGTGCACAATCAGCCACAAGTCCGGGCGAG-ACTGGGCTCTGA-----CAGAGGA----AAGGGAGCTGGGACAgccagaaaatgaaaaggcagcgGTGGCCC----CGGCACAGGATGGCAGGCACCAAAATTTAAGAGTATGGGTCCTGGCCCAGGTCCCATTCTTTTAGACGTTATCCTTGGTTAAAGGCTAGTACAGGGTCCCAAAAGACTAGCGGGTGGTTAGGAGCCTCAGAAAAGGGACTGATGAACATCC-TTCGAGGT--------ACCCCCTACCCGCTACTGGACCTGGTGGCCCCCGGG-GGACCCTGCCGCCGAGGCACCTGAGGGTG-------AAGGCCTTCAGC-TGGGGG--CATTGTTCACAGCGAACGGCGGGACTTGGGGA- i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72195037 1501 - 125710982 AAACAGATGTT-----AACTTCTTCCTTCAGAGATAGAT----TAGATACACAGATACAATTAAAAAG-AAAAAAATTACTTTGTTGGGATC-CCCTCTGTCCTTGTCCTC-ATGGCCACATCTGACAGTCCCTTCCTAGCATCTCCCAAAGCACTATCCCAGGAAAGGATTAGGTTTGCCCAGCAACTCTGACATGACCACAACTG---------------GGGGGAAAGAATGCAGGTTT----GACAGAGATGC--AAGTCAGA-AGCTCAAAGTGGAGACAGGAGGGCCACCAATGAAATGACCCGCTGTGTGGCCAGCAGTTTAGTCTCTCTG----CCAGTTTCCTGCAGCTATAAAAAGTGAGGTTAAGATGGCCAAT--ATAAG--AGAGCTGTTACCAGGAACGGCTTATAAAATCATTCCCTTAATAAGTGGAGCTTTTAACAGCCAAATAAACGGGTCCCATCAGCCTCTGACCTTCAAGTTGCTAAGGGCAA------TTTCTCAGCCCTCTCGGTTCACTTGTTTTTCTTTTATACATACATCTTTATTTATTTTTACTGTACCTATCGATCCACTGTTAAAACAAGG---ACAAGACCTAG-AAAGATGGCACTT--TGTTT---CCTGGCTCTGAACAAGT-------TCAAACAATAGGTTATAATTCAAAATTCCTGGTCCCCAATACTTTCTGGGCATTttaaccactccaagtcagagttttctctctggcaaa----g----aataacagaaagctcacatagtggcaacgacaattgaacgtgacaaggcagagtgcctgccacaatagtagatgcccaataaatgcttgttc-tcttCCTCCCTCAGTGCCATGTCTTCTTCCTCCAGCTGCCTTGTCT-GAAGGGCTGGCT-TCCACACTCCGCGACCAGACCAGGACAAGCCTACCACTTGTCAGAAACTCCCGCCAGTATCCGTTCTTGCCCCGAAACACACACTTAAAAATCAGTCATCCCCAAGACCAAGGACACAGGGGTTCCAAAAGGCACCCCCAAGGGAACCAGTCACCAGCCTTCCTCCTTAAGCAGCTCGGTGCTGTCCGGGAGGGAACTTAGCCCCAACAGCCACTACTAGGATTTTCCCATGGTGCAATGCAACTTCCCCAACTTTTCAGGGCCCACAGTTTCCAAAGAAACCCAGGCAGGCATTGTGCACAATCAGCCACAAGTCCGGGGGAG-ACTGGGCTCTGAG----CAGAGGA----AAGGGAGCTGGGACAGCCAGAAAATAAAAAGGCAACGGCGGCCC----CGGCACAGGATGGCAGGCACCAAAATTTAAGAGTATGGGTCCTGGCCCAGGTCCCATTCTTTTAGACGTTATCCTTGGTTAAAGGCTAGCACAGGGTCCCAAAAGACTAGCGGGTGGTTAGGAGCCTCAGAAAAGGGACTGATGAACATCC-TTCGAGGT--------ACCCCCTACCCGCTACTGGACCTGGTGGCCCCC-GG-GCACCCTGCCGCCGAGGCACCTGAGGGTG-------AAGGCCTTCAGC-GGGGGG--CATTGTTCACAGCAAACGGCGGGACTTGCGGA- i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75654319 1489 - 121768101 AAATAGACCTT-----AACTTCTTCCTTCAGAGATAGAT----TAGATACATAGATACAATTAAAAAGAAAAAAAATTACGTTGTTGAGATC-CCCTCTGTCCTTAACCTC-ATGGCCACAT----------CTTCCTAGCATCTCCCAAAGCACCATCCCAGGAAAGGACTAGGTTTGCCCAGCAACTCTGACATGACCACAGTTGGGGGCATTGGGGGGCGGGGGGAAGAACGCAGGTTTGAGGGACAGAGATGT--AAGTCAGA-AGCCCAAAATGGAGACAAGAGGGCCACCAGTGAAATGACCCGCTGTGTGGCCAGCAGTTTAATC----TG----TCAGTTTCCTTCAGCTATAAAAAGTGAGGTTGAGATGGCCAAT--ATAAG--ACAGCTGTTACCAGGAACCCTTTATAAAATCATTCCCCTAATAAGTGAGGATTTTAACAGCCAAACAAATGGGTCCCATCAGCCTTTGACATTCAAGTTGCTAAGGGCAG------TTTCTCAGCCCTC-----TCACTTGTTTTTCTTTTATGCATACATCTTTACTTATTTTTACTGTACCTATCGATTCACTGTTAAAACAAGG---ACAAGACCTAA-AAAGATGGCACTT--TGTTT---CCTGGGTCTGAACAAGT---TAAATCAAACAATGGGTCATCATTCAAAATTCCTGGTGCCCAACACTTTCTGAGCATTTTAAAAACTCCAACCCAGAGTTTTCTCTCTGGCAAA----G----AGTAACAGAAAGCTCACGTAGAGGCAACG----------GTGAtaaagcaga--gcctgccgcaatagtag-tgcccaataaatggtagttc-tcttCCTCCCTAAGTGCCATGTCTTATTCCTCCAGCTGCATTGTCT-AAAATGCTGGCT-TCCACACTCCGCGGCCAGGCCAGGACAAGCCTACCACTTGTCAGAGACTCCTGCCAGTATCCATTCTTGCCCCCAG--ACACACTTACAAATCAGTCATCCAGAAGACCAAGGACACAGGGGTTCCAAAAGGCACCCCCAAGGGAACCAGCCTCCAGCCTTCCTCCTTATTCAGCTCCGTGCGCTCAGGGAGGGAACTCAGCCCCAGCAGCCACTACTAGGATTTTCCCATGGTGCAATGCAACTTCCCCAACTTTTCCGGGCCCACAGTTTCCAAAGAAACCCAGGCAGGCATTGTGCACAATCAGCCCCAAGTCCGAGCGAG-ATTGGGCTCTGGG----CAGAGGA----AAGGGAGCTGGGACTGCCAGAAAATGAAAAGGCAGCGGCGGCCG----TGGCACA-GATGGCAGGAACCAAAATTTAAGAGTACGGGTCCTGGCCCAGGTCCCATTCTTCCGGACGGTACCCTTGGTTAATGGCTAGCACAGGCTCCCAAAGGACTAGCGGATGGTGAGGAGTCTCAGAAAAGGGACTGACGGACATCC-TCAGAGGT--------GCCCCCTGCCCGCTACTGGACCTGGTGGCCCCC-GG-GGACCCTGCCGCCGAGGCACCTGAGGGTG-------AAGGCCTTCAGT-GGGGGG--CATTGTTCACAGCGAACCGCGGGCCCAGAGA-- i calJac3.chr12 C 0 C 0 s mm10.chr14 24243501 1459 + 124902244 AAGCAAATCTTTGACAAACTTCTTTCTTCAAAGATATAT-------------AGAAGTAGTTAGAATG--AAAAAGGTA-TCTGACGAGGTC---------CTTTATTCTC-TCAGCTGCATTCGAGAGCCTCTTCTAAGCAACT-TCGAGTCAT--TCAAAAGAGACTACTGGCTTTGCCCAGGAACTCCATTA-AACCATACTTG---------------TAGGGACAGCATGAAGGTCTGGGAGACAGA-ATAC--------GA-AAGTCCAAGGGAAGACAGAAGGG-CATCCATGAAGTGCTCTGTTGTGGGG-CAGCAGTTTAGCCTCTCTGTATATCAGTTCCCTTCAGCTAGAGAAAACAGGGTTGAAAGGACTCATGGAGATG--AGGACTGCTACCAGAGACACCTAATAAAACCACTCCCTTTATAAGGATAGCTTTTAACAGTCCCATAAACGGGTCTCCTCAACCTCTGGCCCGCACGTTGCTAAGGGCAGTTTTATTTTTCCAGCTCGCTTCATTCACTGGTCTTT------TACATGTGTCTTGATTGA-TTTTATTATGTATATTGATTCAAC-TTAAAACAAGG---GCAAGAC------------ACACTTGCTGTCT---CCAGGCTCTGAATATGTTTTTTTTTTAAGCAATAGACAATAATTCAAAACTCTTAGCATTCAATCCGT--TAAACATTttaacctctgcaggcc--agttttctctctggcaaagcagg----aatactggatagttcacatgctgttaacagcgattaaatgtgataaggtaGAGTTCCTGCCACAACAG-----ACACCATACATGCCAGCCC-TCATCCTTTCTCTGTACTATGCCTTCTTCC----------TTGTCG-AGGAGGCTGGCT-TCT-CTCTCCACAGCCCAGTCAGGACAAGCCTACCACTAGTCGCAAACTCCAG-CAGCACCCCT------CCCCCTACACACACTTACAACTCAGTCACTTCCAAGAGCAAGAACACAGGGGTTCCAAAGGGCACCACTCAGAG-----GTGCTCAGCTCTCCTCCACCGGGAACTCAGAACTCTCCGGGAGGGAACCGAGCCACAGCAACCACTACTAAGATTTTCCCATGGTGCAATGCAACTTCCTCAACTTTTCCGGGCCCACAATTTCCAAAGAAACCGGGGAAGGCGGTGTGCATAATTCACAGCAAATCTGGGCGAG-TTAGGAGACTGAGGTC-CAGGGGACGAGAAGGAAACGGGCACGGACACAAAGTGAAAAGACACGAGTGACCT------AAAGAGGGTTGCAGGGATCAGAACTTAGGGGATCTTCCCCTGGCCTATATTCCCTTCCTGCGGATTGCAACCCAG----------------GGCTCCCGAAGGGCTAGCCGACCGTGAGAAG-CTTAGAAAGGGGGCTGACCGACATCCTTCCGAGGTGTCTTCCGACCTCCGCCCCGCCACCAGACCTGGTGGCTTCC-GGAGGACTCTGCAGCAGTAGCAACAAGGAGAGGAAAGACAAGGCTTTCGGT-GAGGGGGTTATTGTTCCCAGAAAACCGCAGAACAGAGGCA- i mm10.chr14 C 0 C 0 s canFam3.chr4 27804928 1255 + 88276631 ---------TC-----AACTTCCTCCTTCAAAAATAGAT-------------ATAAACAATTGAGGGGAAAAAAAATTACCCCAATGACATTTCCCTGTGTCTTTATCCTCAATGGGCACATCTGACAG-CCATTCTTAGCATCCTCCAAAGCACCAGCCCAGGAGAGGACCGGGCCTGCCCATCACCTCAAATATGACCATAACTG---------------GGAG--ACTGAAGCAGGTCTAAGGGACGTAAATGCTGGAGTCAGATATCCCAAAGTGGAGACAGT-GGGCCACCAAGGAAATGAAGTGCTGTGGGGACAACAGCTTATTCTGTGTG--TCTCAGTTTCCTCCA-CTATAAAAAGTGAGGCTGAGAGGGCCAAC--ATACACCGCAGCTCTTCCCGGGAACAGCTTATAAAATCACCCCCTTAATAAGTGAGGCTTTTAACAACCAAATAAACGGGTCTCATCAGCCTCTGGCCTACA-GTTACTCCCGGCTC------CTTGTCAGCCGTCTCAGTTTGCTC--------------------------------------------------------TTCCAACCAGGACAACAAGACACAGAAAAGGTGGCAGCC--AGACTCACCCTGGCTCTGAGCGTGT---CAAACAGAACTCTGGGTCCTAATTGAAAACTCCTGGAGCCCAACGC--TCTGCGCCTCTCAA-CACTCCAAACCGCAGTTTTCTCCCTGGTAAA----GTAGTAAGTACACACAGCTCGCGGAGCGGCAACCA----TCAATGCCATAGAGCAGAGGGCCTGCCACAACAGTAGGCGCCTAATAAGCGCAGGTTCAACCTCCTCCCTCGGTGCTACGCCTTCTTCCTCCAGCCTCCCCGTCT-AAAAGGCTGGCTGTGCGCGCTGCGGGCCCAGGC--GGGCCGGCCT-----CTGTCCAACGTCCCCGCCG-----------CCCCCCCAGGCACGC-------------------------------ACGCAGGGTGCTCGGAGCCCGCCCCCA---------GCCACCGG----CCTCCTCGGGCAGCTCG-----CGCCGGGCAGGGTCTGGGCCCCGGCGGCCGCCACCAGGATTTTCCCATGGTGCAATGCAACTTCCCCAACTTTTCCAGGCC--CAGTTTCCAAAG-AGCCGAAGCAGGCATTGTGC--gggcgggcgcgggtcccggcgagcggcgggcgcagggggcgcagggggcg--cagggggcgggcacggccgggaagggcagaggcacccgcggccgggcgaggcccggggcggcggGGCCCAAACCTC--GGGGCGCAGCCCTGGGCCGGGCTC--GTCTTCCGGCCG-----------------------------------------------GGTCACGGGTCGCAGTTGAG-----------------TGCGGGCT--------CCC-----------------------GGGCGCC-GG-GCGC-------------------AGGATG-------CGGAGTTTTGGT-cggggg-------------------ggcggg----gggggc i canFam3.chr4 C 0 C 0 a score=748084.000000 s hg38.chr10_KI270825v1_alt 164735 259 + 188315 GGCGGCGGGACTTCGGGATCCGCGCACCGCCGCCTCCCCAACTGGGCCAGAGGAGCGAGT-CCACCGAGGCCATCGCCAGGTGGAGCGGCGGCCCCGGC--GAGGT--------------ACCCTCGGCCAGCAGGAGGG-AGAAG-------CGGAGGGCGCGTCCCAGAGGCGGGGGC-CAAGGG--TCTGCCACTCACCCGCGCCTTCGGCGGGCTGCGGCGGCCCGACGACGCCGTTCAGGTAGAGAATGGGCAGCAGGTGAGGCTGCGTCTTCTCCAGCGCC s ponAbe2.chr10 76211782 260 - 133410057 GGCAGCGGGACTTCGGGGTCCGCGCACCGCCGCCTCCCCAGCTGGGCCAGAAGAGCGAGT-CCACCGAGGCCATCGCCAGGTGGAGCGGCGGCCCCGGC--GAAGT-------------CCCCCTCGGCCAGCAAGAGGG-AGAAG-------CTGAGGGCGCGTCCCAGAGGCAGGGGC-CGAGGG--TCTGCCACTCACCCGCGCCTTCGGCGGGCTGCGGCGGCCCGACGACGCCATTCAGGTAGAGAATGGGCAGCAGGTGAGGCTGCGTCTTCTCCAGCGCC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35147816 260 + 104879549 GGCGGCGGGACTTCGGGGTCCGCGCATCACCGCCTCCCCAACTGGGCCAGAGAAGCGAGT-CAACCGAGGCCATCGCCGGGTGGAGCGGCGGCCCCGGC--GAGGT-------------CCCCCTCGGCCAGCAGGAGGG-AGAAG-------CGGAGGGCGCGTCCCAGAGGCGGGGGC-CGAGGG--TCTGCCACTCACCCGCGCCTTCGGCGGGCTGCGGCGGCCCGACGACGCCGTTCAGGTAGAGAATGGGCAGCAGGTGAGGCTGCGTCTTCTCCAGCGCC i nomLeu3.chr18 I 18 C 0 s rheMac3.chr9 73939553 260 - 130959383 GGCGGCGGGACTTTGGGGTCCGCGCACCGCCGCCTCCCCAGCTGGGCTAGAGGAACGAGT-CCACCAAGGCCATCGCCAGGTGGAGCGGCGGCCCCGGC--GAGGT-------------CCCCCTCCGCCAGCAGGAGGG-AGAAG-------CGGAGGGCGCGTCCCAGAGGCGGGGGC-CGAGGG--TCTGCCACTCACCCGCTCCTTCCGCGGGCTGCGGCGGCCCGACGACGCCGTTCAGGTAGAGAATGGGCAGCAGGTGAGGCTGCGTCTTCTCCAGCGCC i rheMac3.chr9 C 0 M 877 s macFas5.chr9 75500153 260 - 133195287 GGCGGCGGGACTTTGGGGTCCGCGCACCGCCGCCTCCCCAGCTGGGCTAGAGGAACGAGT-CCACCAAGGCCATCGCCAGGTGGAGCGGCGGCCCCGGC--GAGGT-------------CCCCCTCCGCCAGCAGGAGGG-AGAAG-------CGGAGGGCGCGTCCCAGAGGCGGGGGC-CGAGGG--TCTGCCACTCACCCGCTCCTTCCGCGGGCTGCGGCGGCCCGACGACGCCGTTCAGGTAGAGAATGGGCAGCAGGTGAGGCTGCGTCTTCTCCAGCGCC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73363859 260 - 125196307 GGCGGCGGGACTTTGGGGTCCGCGCACCGCCGcccccccAGCTGGGCTAGAGGAACGAGT-CCACCAAGGCCATCGCCAGGTGGAGCGGCGGCCCCGGC--GAGGT-------------CCCCCACCGCCAGCAGGAGGG-AGAAG-------CGGAGGGCGCGTCCCAGAGGCGGGGGC-CGAGGG--TCTGCCACTCACCAGCTCCTTCCGCGGGCTGCGGCGGCCCGACGACGCCGTTCAGGTAGAGAATGGGCAGCAGGTGAGGCTGCGTCTTCTCCAGCGCC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72196538 262 - 125710982 GGCGGCAGGACTTTGGGGTCCGCGCACCGCCGCCTCCCCAGCTGGGCTAGAGGAACGAGT-CCACCAAGGCCATGGCCAGGTGGAGCGGCGGCCCCGGC--GAGGT-------------CCCCCTCCGCCAGCAGGAGGG-AGAAG-------CGGAGGGCGCGTCCCAGAGGCGGGGGT-CGAGGGTCTCTGCCACTCACCCGCTCCTTCCGCGGGCTGCGGCGGCCCGACGACGCCGTTCAGGTAGAGAATGGGCAGCAGGTGAGGCTGCGTCTTCTCCAGCGCC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75655808 259 - 121768101 GGCGGCGGGTC-TCAGGGTCCTCACACTGTCGCCTCCCCACCCAGGCTAGAGGATCGGGT-CCGCCGCGGCCATCGCCAGGTGGAGCGACGGCCCCGGC--GAGGT-------------CCCCCTCGGCCAGCAGGAGGG-AGAAG-------CGGGGGGCGCGTCCCAGAGGCGGGGGC-CGGGGT--TCTGCTACTCACCCGCGCCCTCGGCGGGCTGCGGCGGCCCGACAACGCCGTTCAGGTAAAGAATGGGCAGCAGGTGAGGCTGCGTCTTCTCCATCGCC i calJac3.chr12 C 0 I 1 s mm10.chr14 24244960 272 + 124902244 GGAGGTGTGAA-TGAGGTTCCAGGCATCCGTCCCTCCCCGGGTAGGATAAGAGAGAAGGTGTCACCCGCGCCATA--CAGGTAGAGCGGTGGCTGCGACCTGAGCCTCGGCCCCCCCAACCCCCTTGGTGAGCTGCAGAG-AGAAGGGGTGGCCGGAGGGC---------AGGAGGGGCCGCGCGGG--ACTGCCACTCACCCGCGCCCTCTGTAGACTGCGGCGGCCCGACGACGCCGTTCAGGTAGAGAATAGGCAGCAGGTGAGGCTGAGTCTTCTCCAGGGCG i mm10.chr14 C 0 C 0 s canFam3.chr4 27806183 187 + 88276631 ggcggtg-----tcggggcgcccg--------------------------------ggac-tcgccgagg--------aggtg------------cggc--cgggc-------------c-----------gcgggagggcagggg-------c----gccccgacccgggggctgcggg-gggggg----gggcACTTACCGGGGCCCTCCGAGGGGTGTGGCGGCCCGACGACCCCGTTCAGGTTAAGGATGGGCAACAGGTGGGGCTTCGTCTTTTCCAACGCC i canFam3.chr4 C 0 C 0 e panTro4.chr10 76543254 488 + 133524379 I a score=9385.000000 s hg38.chr10_KI270825v1_alt 164994 5 + 188315 GCCCG--- s ponAbe2.chr10 76212042 5 - 133410057 GCCCG--- i ponAbe2.chr10 C 0 M 778 s nomLeu3.chr18 35148076 5 + 104879549 GCCCG--- i nomLeu3.chr18 C 0 C 0 s macFas5.chr9 75500413 5 - 133195287 GCCCG--- i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73364119 5 - 125196307 GCCCG--- i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72196800 5 - 125710982 GCCCG--- i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75656068 5 - 121768101 GCCCG--- i calJac3.chr12 I 1 C 0 s mm10.chr14 24245232 5 + 124902244 GCGCG--- i mm10.chr14 C 0 C 0 s canFam3.chr4 27806370 5 + 88276631 ---CGGCG i canFam3.chr4 C 0 C 0 e rheMac3.chr9 73939813 877 - 130959383 M e panTro4.chr10 76543254 488 + 133524379 I a score=131174.000000 s hg38.chr10_KI270825v1_alt 164999 60 + 188315 CAGGTCCTGGAAGTGGTCCC--GCTCCTTGGCCAAGAGCAGCTT-GAGCAGCAGCTCCGCCTT s nomLeu3.chr18 35148081 60 + 104879549 CAGGTCCTGGAAGTGGTCCC--GCTCCTTGGCCAGGAGCAGCTT-GAGCAGCAGCTCCGCCTT i nomLeu3.chr18 C 0 C 0 s macFas5.chr9 75500418 60 - 133195287 CAGGTCCTGGAAGTGGTCCC--GCTCCTTGGCCAGGAGCAGCTT-GAGCAGCAGCTCCGCCTT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73364124 60 - 125196307 CAGGTCCTGGAAGTGGTCCC--GCTCCTTGGCCAGGAGCAGCTT-GAGCAGCAGCTCCGCCTT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72196805 60 - 125710982 CAGGTCCTGGAAGTGGTCCC--GCTCCTTGGCCAGGAGCAGCTT-GAGCAGCAGCTCCGCCTT i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75656073 62 - 121768101 CACGTCCTGAAAGTGGTCCCCGCTTCTTTGGCCAGGAGCAGCTTGGAGCAGCA-CTCCGCCCT i calJac3.chr12 C 0 I 1 s mm10.chr14 24245237 60 + 124902244 CAGGTCCTGGAAGTGGTCCT--GCTCCTTGGCCAGGAGGAGCTG-GAGCAGCAGCTCCGCCTT i mm10.chr14 C 0 C 0 s canFam3.chr4 27806375 60 + 88276631 CAGGTCCTGGAAGTGGGCCC--CCTCCTTGGCCAGCAACAACTG-GAGCAGCCGCTCGGCCTT i canFam3.chr4 C 0 C 0 e ponAbe2.chr10 76212047 778 - 133410057 M e rheMac3.chr9 73939813 877 - 130959383 M e panTro4.chr10 76543254 488 + 133524379 I a score=70800.000000 s hg38.chr10_KI270825v1_alt 165059 22 + 188315 GGCGCCTCCCGCCTCCTCGTCC s panTro4.chr10 76543742 22 + 133524379 GGCGCCTCCCGCCTCCTCGTCC i panTro4.chr10 I 488 C 0 s nomLeu3.chr18 35148141 22 + 104879549 GGCGCCTCCCGCCTCCTCGTCC i nomLeu3.chr18 C 0 C 0 s macFas5.chr9 75500478 22 - 133195287 GGCGCCTCCCGCCTCCTCGTCC i macFas5.chr9 C 0 M 459 s papAnu2.chr9 73364184 22 - 125196307 GGCGCCTCCCGCCTCCTCGTCC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72196865 22 - 125710982 GGCGCCTCCCGCCTCCTCGTCC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75656136 22 - 121768101 GGCGCCTCCCGCCTCCTCCGTC i calJac3.chr12 I 1 I 1 s mm10.chr14 24245297 22 + 124902244 GGCGCCTCCCGCCTCCTCGTCC i mm10.chr14 C 0 C 0 s canFam3.chr4 27806435 22 + 88276631 GGCGCCCCCCGCCTCCGCGTCC i canFam3.chr4 C 0 C 0 e ponAbe2.chr10 76212047 778 - 133410057 M e rheMac3.chr9 73939813 877 - 130959383 M a score=89661.000000 s hg38.chr10_KI270825v1_alt 165081 41 + 188315 AGCTGCCGCC-GCTCGCCGGGA--CTGAGCGCTCCCGCGGCCTC s panTro4.chr10 76543764 41 + 133524379 AGCTGCCGCC-GCTCGCCGGGA--CTGAGCGCTCCCGCGGCCTC i panTro4.chr10 C 0 C 0 s nomLeu3.chr18 35148163 41 + 104879549 AGCTGCCGCC-GCTCGCCGGGA--CTGAGCGCTCCCGCGGCCTC i nomLeu3.chr18 C 0 C 0 s papAnu2.chr9 73364206 41 - 125196307 AGCTGCCGCC-GCTCGCCGGGA--CTGAGCGCTCCCGCGGCCTC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72196887 41 - 125710982 AGCTGCCGCC-GCTCGCCGGGA--CTGAGCGCTCCCGCGGCCTC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75656159 44 - 121768101 AGCTGCCGCCGGCTCGCCGGGGGCTGGAGCGCTTCCGCGGGCTC i calJac3.chr12 I 1 I 323 s mm10.chr14 24245319 41 + 124902244 AGCTGCCGCC-GCTCGCCGGGG--CTCAGCGCTCCTGCTGCCTC i mm10.chr14 C 0 C 0 s canFam3.chr4 27806457 41 + 88276631 AGCCGCCGCC-GCTCGCCCGGG--CTCAGCGCGCCCGCCGCCTC i canFam3.chr4 C 0 C 0 e ponAbe2.chr10 76212047 778 - 133410057 M e macFas5.chr9 75500500 459 - 133195287 M e rheMac3.chr9 73939813 877 - 130959383 M a score=253148.000000 s hg38.chr10_KI270825v1_alt 165122 149 + 188315 GAGCAGCCCGAGCACGGCTTCCACCTCCGTCATGGCCTGGGCCAGGCTCTGCTGACACTGGGCGAGCAGCTCCCGGCGCTGGGGCTCCATGGTGGCGG-----GCCGCGCCGCCCCGCCCCGCCGGACGCCTCCCGGGCCCCCCGAGGCCGGCG s panTro4.chr10 76543805 149 + 133524379 GAGCAGCCCGAGCACGGCTTCCACCTCCGTCATGGCCTGGGCCAGGCTCTGCTGACACTGGGCGAGCAGCTCCCGGCGCTGGGGCTCCATGGTggcgg-----gccgcgccgccccgccccgccggACGCCTCCCTGGTCCCCCGAGGCCGGCG i panTro4.chr10 C 0 C 0 s nomLeu3.chr18 35148204 149 + 104879549 GAGCAGCCCGAGCACGGCTTCCACCTCCGTCATGGCCTGGGCCAGGCTCTGCTGACACTGGGCGAGCAGCTCCCGGCGCTGGGGCTCCATGGTGGCGG-----GCCGCGCCGCCCCGCCCCGCCGGACGCCTCCCGGTCCCCCCGAggccggcg i nomLeu3.chr18 C 0 C 0 s papAnu2.chr9 73364247 149 - 125196307 GAGCAGCCCGAGCACGGCTTCCACCTCCGTCATGGCCTGGGCCAGGCTCTGCTGACACTGGGCGAGCAGCTCCCGGCGCTGGGGCTCCATGGTggcgg-----gctgcgccgccccgccccgccggacgcctcccgggccccccgaggccggcg i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72196928 149 - 125710982 GAGCAGCCCGAGCACGGCTTCCACCTCCGTCATGGCCTGGGCCAGGCTCTGCTGACACTGGGCGAGCAGCTCCCGGCGCTGGGGATCCATGGTGGCGG-----GCTGCGCCGCCCCGCCCCGCCGGACGCCTCCCGGGCCCCCAGAggccggcg i chlSab2.chr9 C 0 C 0 s mm10.chr14 24245360 154 + 124902244 CAGCAGCCCAAGCACGGCCTCCACCTCGGTCATGGCCTGGGCCAGGCTCTGCTGACACTGGGCGAGCAGCTCCCGGCGCTGCGGCTCCATGGTGGCGGcccgcgccgccccgccccgccccgccGGACGGCGCCGGGGCTTCCCGAGGCCGGCG i mm10.chr14 C 0 C 0 s canFam3.chr4 27806498 143 + 88276631 CAGCAGCCCGAGCACCGCCTCCACCTCGGTCATGGCCTGCGCCAGGCTCTGCTGACACCGGGCGAGCAGCTCGCGGCGCCCCGGCTCCATGGTGGCG------Gccgccccgccccgtcccggc-----ccgccccggctcggcccggcccgcG i canFam3.chr4 C 0 C 0 e ponAbe2.chr10 76212047 778 - 133410057 M e calJac3.chr12 75656203 323 - 121768101 I e macFas5.chr9 75500500 459 - 133195287 M e rheMac3.chr9 73939813 877 - 130959383 M a score=171549.000000 s hg38.chr10_KI270825v1_alt 165271 127 + 188315 GGCGGGCAGGCGAGCACCTCGGCAGC-AGCCCTAGGGCGCCGGGAGCCG-----TGAGGCGGCGGGAGCCAT------------GGGCCGGGGCCTGGGCGGGCTGGGGGCCCGGGGCGG-CG-GGCGGCGCTCAGCAGCGGCCGCC s panTro4.chr10 76543954 127 + 133524379 GGCGGGCAGGCGAGCGCCTCGGCAGC-AGCCCTAGGGCGCCGGGAGCCG-----TGAGGCGGCGGGAGCCAT------------gggccggggcctgggcgggctgggggcccggggcgg-cg-ggcggcgcTCAGCAGCGGCCGCC i panTro4.chr10 C 0 C 0 s nomLeu3.chr18 35148353 139 + 104879549 ggcgggcaggcgagcgCCTCGGCAGC-AGCTCTAGCGCGCCGGGAGCCG-----CGAGGCGGCGGTAGCCATgggccggggctggggccggggcctgggcgggctaggggcccggggcgg-CA-GGCGGCGCTCAGCAGCGGCCGCC i nomLeu3.chr18 C 0 C 0 s papAnu2.chr9 73364396 133 - 125196307 ggcgggcgggcgagcgcctcggcagc-agccctagcgcgccgggagccg-----cgaggcggcgggagccatgggctg------gggccggggcctgggcgggctgggggcccggggcgg-cg-ggcggcgctcagcagcggccgcc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72197077 133 - 125710982 ggcgggcgggcgagcgCCTCGGCAGC-AGCCCTAGCGCgccgggagccg-----cgaggcggcgggagccatgggccg------gggccggggcctgggcgggctgggggcccggggcgg-cg-ggcggcgcTCAGCAGCGGCCGCC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75656526 130 - 121768101 GGCGAGCAAGCGA---CTTCGGAGGCAAGCCTAAGCGCACAGGAGTCAG-----CGAGGCAGCGGG-TCCATGGACAG------GGACCAGGTCCGGGGGTTGGCTGGGGCCCAGGACGG-CG-GGCGACGCTCAACAGCGGCCGCC i calJac3.chr12 I 323 C 0 s mm10.chr14 24245514 119 + 124902244 GGCTGCACGCCGA---ACTGGGCGGC-AGC-CTAGCGCGCCGGGAGTCG-----CGAGGCGGCGGGGCCCAT------------GGGCCGGGGCCT--GCGAGCCTCGGGGCCGGGACGATCG-GGCAGCTCTCAA---CGGCCGCC i mm10.chr14 C 0 C 0 s canFam3.chr4 27806641 103 + 88276631 -----------GA------CGGCATC-TCCCCTAGG----CGGGGGCGGCTCCCCGAGACGGGGG-------------------CGGCAGGGGCCTGGCTCGGCCTAGCCCGCGGGGCTG-CGTGGCGG--CCGGACGGCGGGCGCC i canFam3.chr4 C 0 M 1414 e ponAbe2.chr10 76212047 778 - 133410057 M e macFas5.chr9 75500500 459 - 133195287 M e rheMac3.chr9 73939813 877 - 130959383 M a score=226620.000000 s hg38.chr10_KI270825v1_alt 165398 122 + 188315 TCCCGGGCTCCGGAGCGCA-GCCATGTTGGCTG-CCGCGGCGGCGGGACTggaagaggaggaggaggagacggaggaggagaaggaggaggcggaggtggggaCGGCGGCCGGGGCGCGCCCCG s panTro4.chr10 76544081 122 + 133524379 TCCCGGGCTCCGGAGCGCA-GCCATGTTGGCTG-CCGCGGCGGCGGGACTggaagaggaggaggaggagacggaggaggagaaggaggaggcggaggTGGGGAcggcggccggggcgcgccccg i panTro4.chr10 C 0 C 0 s nomLeu3.chr18 35148492 122 + 104879549 TCCCGGGCTCCGGAGCGCA-GCCATGTTGGCTG-CCGCGGCGGCGGGACTGGAAAaggaggaggaggagacggaggaggagaaggaggaggcggaggTGGGGACGGCGGCCGGGGCGCGCCCCG i nomLeu3.chr18 C 0 C 0 s papAnu2.chr9 73364529 122 - 125196307 tcccgggctccggAGCGCA-GCCATGTTGGCTG-CCGCGGCGGCGGgactggaagaggaggaggaggagacgcaggaggagaaggaggaggcggaggtggggaCGGCGGCCGGGGCGCGCCCCG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72197210 119 - 125710982 TCCCGGGCTCCGGAGCGCA-GCCATGTTGGCTG-CCgcggcggcgggactggaa---gaggaggaggagacgcaggaggagaaggaggaggcggaggtggggacggcggccggggcgCGCCCCG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75656656 123 - 121768101 TCCCGGACTCCGGAGCGCAGGCCATG-TGGCTGCCCGCGGCTGCGGGACTggaagaggaggaggaggagacggaggaggagaaggaggaggcggaggTGGGGAcggcggccggggcgcgccccg i calJac3.chr12 C 0 C 0 s mm10.chr14 24245633 119 + 124902244 TCCCGGGCTCCGGGGCGCA-GCCATGTTGGCTA-CGGCGGCGGCGGGACTggaa---gaggaggaggagacggaggaggagaaggaggaggcggaggTGGGGAcggcggccggggcgcgccccg i mm10.chr14 C 0 C 0 e canFam3.chr4 27806744 1414 + 88276631 M e ponAbe2.chr10 76212047 778 - 133410057 M e macFas5.chr9 75500500 459 - 133195287 M e rheMac3.chr9 73939813 877 - 130959383 M a score=164811.000000 s hg38.chr10_KI270825v1_alt 165520 87 + 188315 AGGCCGGGCTCCAGCCGGGCATGCTCCCCCTCCCCCTCAGCCTCCGCGCGCGCCGCCCGCCCC-GCGAGAAAACTCGCCCCGAAAGCC s panTro4.chr10 76544203 87 + 133524379 aggccgggcTCCAGCCGGGCATGCTCCCCCTCCCCCTCAGCCTccgcgcgcgccgcccgcccc-gcgAGAAAACTCTCCCCGAAAgcc i panTro4.chr10 C 0 C 0 s nomLeu3.chr18 35148614 88 + 104879549 AGGCCGGGCTCCAGCCGGGCATGCTCCCCCTCCCCCTCAGCCTCCGCGCGCGCCGCCCGCCCCGGCGAGAAAACTCGCCCCGAAAGCC i nomLeu3.chr18 C 0 M 100 s macFas5.chr9 75500959 87 - 133195287 AGGCCGGGCTCCAGCCGGGCATGctccccctccccctcagcctccgcgcgcgccgcccgcccc-gcGAGAAAACTCGCCCCGAAAGCC i macFas5.chr9 M 459 C 0 s papAnu2.chr9 73364651 87 - 125196307 AGGCCGGGCTCCAGCCGGGCATGctccccctccccctcagcctccgcgcgcgccgcccgcccc-gcgagaaaactcgccccgaaagcc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72197329 87 - 125710982 AGGCCGGGCTCCAGCCGGGCATGctccccctccccctcagcctccgcgcgcgccgcccgcccc-gcGAGAAAACTCGCCCCGAAAGCC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75656779 66 - 121768101 aggccgggcTCCAGCCGGGCATGCTCCCCCTCCCCCTCAGCCTccgcgcgcgccgcc--cccc-gcgAG------------------- i calJac3.chr12 C 0 C 0 s mm10.chr14 24245752 56 + 124902244 AGGCCTCGCAGCAGCCAGGCATG--CCCCCTCCAGCTCCGCCTCCGCGCCCACCGCCC------------------------------ i mm10.chr14 C 0 C 0 e canFam3.chr4 27806744 1414 + 88276631 M e ponAbe2.chr10 76212047 778 - 133410057 M e rheMac3.chr9 73939813 877 - 130959383 M a score=17591.000000 s hg38.chr10_KI270825v1_alt 165607 25 + 188315 GGGCCGCGCGCCGCCCCCAGAGCAA s panTro4.chr10 76544290 25 + 133524379 gggccgcgcgccgcccccAGAGCAA i panTro4.chr10 C 0 C 0 s macFas5.chr9 75501046 25 - 133195287 GGGCCGCGCGCCGCCCCCGGAGCGA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73364738 25 - 125196307 gggccgcgcgccgccccccgAGCGA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72197416 25 - 125710982 GGGCCGCGCGCCGCCCCCCGAGCGA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75656845 3 - 121768101 ----------------------CGA i calJac3.chr12 C 0 C 0 s mm10.chr14 24245808 8 + 124902244 --------CGCCGCAC--------- i mm10.chr14 C 0 C 0 e canFam3.chr4 27806744 1414 + 88276631 M e ponAbe2.chr10 76212047 778 - 133410057 M e nomLeu3.chr18 35148702 100 + 104879549 M e rheMac3.chr9 73939813 877 - 130959383 M a score=192563.000000 s hg38.chr10_KI270825v1_alt 165632 102 + 188315 GACTACAACTCCCG-GGAGAAAGTCGCCTGGGCCGTGTTTCCCAGGCTCCCGACAGCTCCGGCCCGGCTCGGAGGCCGCCTCGGCCCCCGTGCACCCCGGCCC s panTro4.chr10 76544315 102 + 133524379 GACTACAACTCCCG-GGAGAAAGTCGCCTGGGCCGTGTTTCCCAGGCTCCCGACGGCTCCGGCCCGGCTCGGAGGCCGCCTCGGCCCCCGTGCACCCCGGCCC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76212825 102 - 133410057 GACTACAACTCCCG-GGAGAAAGTCGCTTGGGCCGTGTTTCCCGGGCTCCCGACGGCTccggcccggctcggaggccgcctcggcccccgtgcaccccggccc i ponAbe2.chr10 M 778 C 0 s macFas5.chr9 75501071 102 - 133195287 GACTACAACTCCCG-GGAGAAAGTCGCCTGGGCAGTGTTCCCTGGGCCCCCGACGGCTCCGACCCGGCTCGGAGGCTGCCTCGGCCCCCGTGCACCCCGGTCC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73364763 102 - 125196307 GACTACAACTCCCG-GGAGAAAGTCGCCTGGGCAGTGTTCCCCGGGCCCCCGACGGCTCCGACCCGGCTCGGAGGCTGCCTCGGCCCCCGTGCACCCCGGTCC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72197441 102 - 125710982 GACTACAACTCCCG-GGAGAAAGTCGCCTGGGCAGTGTTCCCCGGGCCCCCGACGGCTCCGACCCGGCTCGGAGGCTGCCTCGGCCCCCGTGCACCCCGGTCC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75656848 101 - 121768101 GACTACAACTCCCG-GGGGAAAGTCGCCTGGACCGTGTTCCCTGGGCCCTCGACGGCTCCGGCCCGGCTCAGAGGccgcctcggcccccttgcg-cccggccc i calJac3.chr12 C 0 C 0 s mm10.chr14 24245816 57 + 124902244 -ACTGCGATCGCCGCGGGGGGAATTG------------TCGCCGGGCGCCCGACGGCTCCGGCCCGGCTC--------------------------------- i mm10.chr14 C 0 C 0 e canFam3.chr4 27806744 1414 + 88276631 M e nomLeu3.chr18 35148702 100 + 104879549 M e rheMac3.chr9 73939813 877 - 130959383 M a score=76918.000000 s hg38.chr10_KI270825v1_alt 165734 33 + 188315 GGCTCACCGGGGCCCCGCGGCCGCCACCCGCTC s panTro4.chr10 76544417 33 + 133524379 GGCTCACCGGGGCCccgcggccgccacccgctc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76212927 33 - 133410057 ggctcaccggggccccgcggccgccacccgctc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35148802 33 + 104879549 GGCTCACCGGGGCCCGAGGgccgccacccgctc i nomLeu3.chr18 M 100 C 0 s macFas5.chr9 75501173 33 - 133195287 GGCTCACCGGGGCCCCGCAGCCGCCGTCCGCTC i macFas5.chr9 C 0 M 705 s papAnu2.chr9 73364865 33 - 125196307 GGCTCAccggggccccgcagccgccgtccgctc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72197543 33 - 125710982 GGCTCACCGGCGCCCCGCAGCCGCAGTCCGCTC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75656949 33 - 121768101 ggctcaccgctgccccgcggccgccgcccgctc i calJac3.chr12 C 0 C 0 s mm10.chr14 24245873 25 + 124902244 ----CCCCGAGCTCCCACA-CCGCCGCCTG--- i mm10.chr14 C 0 C 0 e canFam3.chr4 27806744 1414 + 88276631 M e rheMac3.chr9 73939813 877 - 130959383 M a score=43437.000000 s hg38.chr10_KI270825v1_alt 165767 27 + 188315 CCCCGTGGCCACAGCCCCGCCGCCGCC s panTro4.chr10 76544450 27 + 133524379 cgccgtggccacagccccgccgccgcc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76212960 27 - 133410057 cgccgtggccacagccccgccgccgcc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35148835 27 + 104879549 cgccgaggtcacagccccgccgccgcc i nomLeu3.chr18 C 0 C 0 s papAnu2.chr9 73364898 27 - 125196307 cgccatagccccagccccgccgccgcc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72197576 27 - 125710982 CGCCATAGCCCCAGCCCCGCCGCCGCC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75656982 27 - 121768101 cgccatggcccccgccccgccgccgcc i calJac3.chr12 C 0 C 0 s mm10.chr14 24245898 9 + 124902244 -----------------CACAGCCGC- i mm10.chr14 C 0 C 0 e canFam3.chr4 27806744 1414 + 88276631 M e macFas5.chr9 75501206 705 - 133195287 M e rheMac3.chr9 73939813 877 - 130959383 M a score=316769.000000 s hg38.chr10_KI270825v1_alt 165794 130 + 188315 G---GCCCGTCCCTCC--TCTC----TCCCCTCCCCAGGCCGTCCCT--CCGggaggcggcagca-ggggagga----------------ggggacgggcggaggggaggGGT-------------------CCCCGGCCCGCCCGCTAGGCGGGGACGCGGCGCCGGCTGGTTCCC s panTro4.chr10 76544477 133 + 133524379 gccgGCCCGTCCCTCC--TCTC----TCCCCTCCCCAGGCCGTCACT--CCGGGAGGCGGCAGCA-GCGGAGGA----------------GGGGACGGGCGGAGGGGAGGGGT-------------------CCCCGGCCCGCCCGCTAGGCGGGGACGCGGCGCCGGCTGGTTCCC i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76212987 135 - 133410057 g---gcccgTCCCTCC--TCTC----TCCCCTCCCCGGGCCGTCCCT--CCGGGAGGCGGCAGCA-GCGGAGGA----------------GGGGACGGGCGGAGGGGTGGGGT-------------ccccgcccccggcccgcccgcTAGG-GGGGACGCGGCGCCGGCTGGTTCCC i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35148862 136 + 104879549 g---GCCCGTCCCTCC--TCTC----TCCCCTCCCCAGGCCGTCCCT--CCGGGAGGCGGCAGCA-GCGGAGGA----------------GGGGACGGGCAGAGGGGAGGGGT-------------CCCCGCCCCCGGCCCGCCCGCTAGGCGGGGACGCGGCGCCTGCTGGTTACC i nomLeu3.chr18 C 0 C 0 s macFas5.chr9 75501911 152 - 133195287 G---GCCGGTCCCTCC--TCTC----TCCCCTCCCCAGGCCGTCCCT--CCGggaggtggcagca-gcggaggaggggacgggcggagggggggacgggcggaggggaggGGT-------------CCCCGCCCCCGGCCCGCCCGCTAGGCGGGGACGCGGCGCCGGCTGGTTCCC i macFas5.chr9 M 705 C 0 s papAnu2.chr9 73364925 152 - 125196307 g---gccggtccctcc--tctc----tcccctccccaggccgtccct--ccgGGAGGTGGCAGCA-Gcggaggaggggacgggcggagggggggacgggcggaggggaggggt-------------ccccgcccccggcccgcccgctaggcggggacgcggcgccggctggttccc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72197603 152 - 125710982 G---GCCGGTCCCTCC--TCTC----TCCCCTCCCCAGGCCGTCCCT--CCGggaggtggcagca-gcggaggaggggacgggcggagggggggacgggcggaggggaggGGT-------------CCCCGGCCCCGGCCCGCCCGCTAGGCGGGGACGCGGCGCCGGCTGGTTCTC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75657009 153 - 121768101 g---gcccgtccctcc--tctctctttcccctccccaggccgtccct--ccGGGAGGCGGCAGCG-GCGGAGAA----------------AGGGACGGGCGGAGGGGAGGGGAGGGGTCCCCAgccccccgcccccggcccgcccgcTAGGCGGGGACGCGGCGCTGGCTGGTTCCT i calJac3.chr12 C 0 C 0 s mm10.chr14 24245907 92 + 124902244 G---GTCCGCCCCTCTGGCCTC----TCTCCTCCCCGGCCCGCCTTCGGCCTGGAGGAGGTAGCAGGCAACTGA----------------AACACTGGGCGAAGGGGAAGGGT-------------CC------------------------------------------------- i mm10.chr14 C 0 C 0 e canFam3.chr4 27806744 1414 + 88276631 M e rheMac3.chr9 73939813 877 - 130959383 M a score=499424.000000 s hg38.chr10_KI270825v1_alt 165924 159 + 188315 GGTCCCCCGAGGCCCAGGCGCAGCCGGGGGTGGGGGACACGGAGTCAGGCCTGGCACGCGGCCAGCCCACAAGCTGCTG-GAGA--------CCCCCTCATACAAATCTTG-CCCCCAGTCCAGAGGGTCCTAATCTGAGAACTCCAAAATACAGCCTGGAGACAAATG s panTro4.chr10 76544610 159 + 133524379 GGTCCCCCGAGGCCCAGGCGCAGCCGGGGGTGGGGGACACGGAGTCAGGCCTGGCACGCGGCCAGCCCACAAGCTGCTG-GAGA--------CCCCCTCATACAAATCTTG-CCCCCAGTCCAGAGGGTCCTAATCTGAGAACTCCAAAATACAGCCTGGAGACAAATG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76213122 159 - 133410057 GGTCCCCCGAGGCCCAGGCGCAGCCGGGGGTGGGGGACACGGAGTCAGGCCTGGCACGCGGCCAGCCCCCAAGCTGCTG-GAGA--------CCCCCTCATACAAATCTTG-CCCCCAATCCAGTGGGTCCTAATCTGAGAACTCCAAAATACAGCCTGGAAACAAATG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35148998 158 + 104879549 GGTCCCCCGAGGCCCAGGCGCTGCCGGGGGT-GGGGACACGGAGTCAGGCCTGGCACGCGGCCAGCTCACAAGCTGCTG-GAGA--------CCCTCTCATACAAATCTTG-CCCCCAGTCCAGTGGGTCCTAATCTGAGAACTCCAAAATAAAGCCTGGAGACAAGTG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73940690 159 - 130959383 GGTCCCCCGAGGCCCAGGCGCAGCCGGAGGTGGGGGACGCGGAGTCAGGCCGGGCACGCGGCCAGCCCACAAGCTGCTG-GAGA--------CCCCCTCATACAAATCTTG-CCCCCAATCCAGTGGGTCCTAAACTGAGAACTCCAAATTAAAGCCTGGAGACGAATG i rheMac3.chr9 M 877 C 0 s macFas5.chr9 75502063 159 - 133195287 CGTCCCCCGAGGCCCAGGCGCAGCCGGAGGTGGGGGACGCGGAGTCAGGCCGGGCACGCGGCCAGCCCACAAGCTGCTG-GAGA--------CCCCCTCATACAAATCTTG-CCCCCAATCCAGTGGGTCCTAAACTGAGAACTCCAAATTAAAGCCTGGAGACGAATG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73365077 159 - 125196307 ggtcccccgAGGCCCAGGCGCAGCCGGAGGTGGGGGACGCGGAATCAGGCCGGGCACGCGGCCAGCCCACAAGCTGCTG-GAGA--------CCCCCTCATACAAATCTTG-CCCCCAATCCAGTGGGTCCTAAACTGAGAACTCCAAATTAAAGCCTGGAGACAAATG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72197755 159 - 125710982 GGTCCCCCGAGGCCCAGGCGCAGCCGGAGGTGGGGGACGCGGAGTCAGGCCGGGCACGCGGCCAGCCCACAAGCTGCTG-GAGA--------CCCCCTCATACAAATCTTG-CCCCCAATCCAGTGGGTCCTAAACTGAGAACTCCAAATTAAAGCCTGGAGACAAATG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75657162 160 - 121768101 GGTCCCCCGAGGCCCAGGCGCAGTCGGGGGTGGGGGCCGAGGAGTCAGGCCGGGCACGCAGCCAGCCCACAAACTGCTG-GAGA--------CCCCCTCATACAAATCCTGCCCCCCAATCCAGTGTCTCCTAATCCGAGAATTCCAAAATAAAGCCTGGAGACAAATG i calJac3.chr12 C 0 C 0 s mm10.chr14 24245999 114 + 124902244 GGACCCCACCGGCCC----------------------------------------------TTAGTCCACAAGGTACTGAGAGAAACTGCTCCTACCCTGTTCACATACTG-CCCCTAGTCCAGAGTCTTCTA-----AGAATTCTAAAACAAACCAAGGACACAA--- i mm10.chr14 C 0 C 0 e canFam3.chr4 27806744 1414 + 88276631 M a score=1316550.000000 s hg38.chr10_KI270825v1_alt 166083 396 + 188315 GTGGGGAGGGTTTCCCCTAAATTTGGACATCTCCAGATT-AAGACCTCCGCCGAATCCGTGAGGCTTTCCCTCTCCAAGGAGCTCCTA---AGAGAATTTCCCAGTAAAATCGCCTCAACTG-----CGGTAAATAGG-CTGTTCCCCGCGCCAGCATTTGAGAAGAGCTGGTCCCCAGAGTGTAAAGGAGTTAGGATGTTGGCAGGAGGA--AGGATGTGTCGCCGGATGAGGAAAAGAAAGGTGGGTGTCTGCGGTG--CAGTCCTTGGTCTTTCTGGCAAGTGAGGCGCTCTCCCCCTAAA----------------------TGTCTC----AGAGGGAGACAAATCAGCGGACT-------ACCTTGCTTCCTTTGATG-ACTTGGAAAGGATCTGCAGTCCC-CCTTAAAGCCCAAGAATGTCTTCTCTTCCACGACAG s panTro4.chr10 76544769 396 + 133524379 GTGGGGAGGGTTTCCCCTAAATTTGGACATCTCCAGATT-AAGACCTCTGCCGAATCCGTGAGGCTTTCCCTCTCCAAGGAGCTCCTA---AGAGAATTTCCCAGTAAAATCGCCTCAACTG-----CGGTAAATAGG-CTGTTCCCCGCGCCAGCATTTGAGAAGAGCTGGTCCCCAGAGTGTAAAGGAGTTGGGATGTTGGCAGGAGGA--AGGATGTGTCGCCGGATGAGGAAAAGAAAGGTGGGTGTCTGCGGTG--CAGTCCTTGGTCTTTCTGGCAAGTGAGGCGCTCTCCCCCTAAA----------------------TGTCTC----AGAGGGAGACAAATCAGCGGACT-------ACCTTGCTTCCTTTGATG-ACTTGGAAAGGATCTGCAGTCCC-CCTTAAAGCCCAAGAATGTCTTCTCTTCCACGACAG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76213281 399 - 133410057 GTGGGGAGGGTTTCCCGTAAATTTGGACATCTCCAGATT-AAGACCTCCGCCGAATCCGTGAGGCTTTCCCTCTCCAAGGAGCTCCTAAGTAGAGAATTTCCCAGTAAAATCGCCTCAACTG-----CGGTAAATAGG-CTGTTCCCCGCGCCAGCATTTGAGAAGAGCTGGTCCCCAGAGTGTACAGGAGTTGGGATGTTGGCAGGAGGA--AGGGTGTGTCGCCGGATGAGGAAGAGAAAGGTGGGCGTCTGCGGTG--CAGTCCTTGGTCTTTCTGGCAAGTGAGGCGCTCTCCCCCTAAA----------------------TGTCTC----AGAGGGAGACAAATCAGCGGACT-------ACCTTGCTTCCTTTGATG-ACCTGGAAAGGATCTGCAGTCCC-CCTTAAAGCCCAAGAATGTCTTCTCTTCCACGACAG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35149156 399 + 104879549 GTGGAGAGGGTTTCCCCTAAATTTGGATATCTCCAGATT-AAGACCTCCGCCGAATCCGTGAGGCTTTCCCTCTCCAAGGAGCTCCTAAGTAGAGAATTTCCCAGTAAAATCGCCTCAACTG-----CGGTAAATAGG-CTGTTTCCCGCGCCAGCATTTGAGAAGAGCTGGTCCCCAGAGTGTAAAGGAGTTGGGATGTTGGCAGGAGGA--AGGGTGTGTCGTCGGATGAGGAAGAGAAAGGTGGGCGTCTGCGGTG--CAGGCCTTGGTCTTTCTGGCAAGTGAGGCGCTCTCCCCCTAAA----------------------TGTCTC----TGAGGGAGACAAATCAACGGACT-------ACCTTGCTTCCTTTGATG-ACCTGGAAAGAATCTGCAGTCCC-CCTTAAAGCCCAAGAATGTCTTCTCTTCTACGACAG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73940849 394 - 130959383 GTGGGGAAGGTTTCCCCTAAATTTGGACATCTTCAGATT-ACCACCTTCGCCGAATCCATGAGGCTTTTCCTCTCCAAGGAGCACCTAAGTGGAGAATTTCCCAATAAAATCGCCTCAACTG-----CGGTAAATAGG-CTGTTCCCCGCGCCAGCATTTGAGAAGAGCTGCT-CCCAAAGTCTAAAGGAGTTGGGATGTTGGCAGG------AGGGTGTGTCGCTGCATGAGGAAGAGAAAGGTGGGCATCTGCGGTG--CAGTCCTTGGTCTTTCTGGCAAGTGGGGCGCTCTCCCCCTAAA----------------------TGTCTC----AGAGGGAGACAAATCAGCGGACT-------ACCTTGCTTCCTTTGATG-ACCTGGAAAGGGTCTGCAGTCCC-CCTTAAAGCCCAAGAATGTCTCCTCTTCCACGACAG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75502222 394 - 133195287 GTGGGGAAGGTTTCCCCTAAATTTGGACATCTCCAGATT-ACCACCTCCGCCGAATCCATGAGGCTTTTCCTCTCCAAGGAGCACCTAAGTGGAGAATTTCCCAATAAAATCGCCTCAACTG-----CGGTAAATAGG-CTGTTCCCCGCGCCAGCATTTGAGAAGAGCTGCT-CCCAAAGTCTAAAGGAGTTGGGATGTTGGCAGG------AGGGTGTGTCGCTGGATGAGGAAGAGAAAGGTGGGCATCTGCGGTG--CAGTCCTTGGTCTTTCTGGCAAGTGGGGCGCTCTCCCCCTAAA----------------------TGTCTC----AGAGGGAGACAAATCAGCGGACT-------ACCTTGCTTCCTTTGATG-ACCTGGAAAGGGTCTGCAGTCCC-CCTTAAAGCCCAAGAATGTCTCCTCTTCCACGACAG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73365236 394 - 125196307 GTGGGGAAGGTTTCCCCTAAATTTGGACATCTCCACATT-ACCACCTCCGCCGAATCCATGAGGCTTTTCCTCTCCAAGGAGCACCTAAGTGGAGAATTTCCCAATAAAATCGCCTCAACTG-----CGGTAAATAGG-CTGTTCCCCGCGCCAGCATTTGAGAAGAGCTGCT-CCCAGAGTCTAAAGGAGTTGGGATGTTGGCAGG------AGGGTGTGTCGCTggatgaggaagagaaaggtgGGCATCTGCGGTG--CAGTCCTTGGTCTTTCTGGCAAGTGGGGCGCTCTCCCCCTAAA----------------------TGTCTC----AGAGGGAGACAAATCAGCGGACT-------ACCTTGCTTCCTTTGATG-ACCTGGAAAGGGTCTGCAGTCCC-CCTTAAAGCCCAAGAATGTCTCCTCTTCCACGACAG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72197914 394 - 125710982 GTGGGGAAGGTTTCCCCTAAATTTGGACATCTCCAGATT-ACCACCTCCGCCGAATCCATGAGGCTTTTCCTCTCCAAGGAGCACCTAAGTAGAGAATTTCCCAATTAAATCGCCTCAACTG-----CGGTAAATAGG-CTATTCCCCGCGCCAGCATTTGAGAAGAGCTGCT-CCCAGAGTCTAAAGGAGTTGGGATGTTGGCAGG------AGGGTGTGTCGCTGGATAAGGAAGAGAAAGGTGGGCATCTGCGGTG--CAGTCCTTGGTCTTTCTGGCAAGTGGGGCGCTCTCCCCCTAAA----------------------TGTCTC----AGAGGGAGACAAATCAGCGGACT-------ACCTTGCTTCCTTTGATG-ACCTGGAAAGGGTCTGCAGTCCC-CCTTAAAGCCCAAGAATGTCTCCTCTTCCACGACAG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75657322 405 - 121768101 GGGGGGAGGGCTTCCCCTAAATTTGGACATCTCCAGATT-ACGACCTCCGCCGAAAACGTGAGGCTTTCCCTCTCCAAAGAGGTTCTAAGTAGAGAATTTCCCAATAAAATCGCCTCAACTGAGACTCATCGAATGGG-CTGGTCCCCGCGCCAGCATTTGAGAAT-GCTGGTCCCCAGAGTCTAAAGGAGTTGGGATGTTGGCAGGAAGA--AGGACGAGCCACTGGATGAGGAAGAGAAAGGTGGGCGTCTACGGTGCACAGTCCTTGGTCTTT-TGGCAAGTGAGGCGCTCTCCTTCTAAA----------------------TGTCTC----AAAGGGAGACAAATCAGCGGGCT-------ACCTTGCTTCCTTCGACG-ACCTGGAAAGGCGCTGCAGTCCCACCTTAAAGCCCAAGAACGTCTTCTCTTACACGACAG i calJac3.chr12 C 0 C 0 s mm10.chr14 24246113 331 + 124902244 -TGCAAAACCCTCCCCC---ACTTGGTCATTTCCAATTTAAAGACCTCTCCAGAACTTG-------TCCCCATTCCAAGATTTTCTTA----GAAAATCTCCCAATAAAACCCCCTAACCTGCCTCACAGTTAATAG---CATCCTGCACACCTGTATCAGAGC----------TCCAGAGTCAAAGGCAGT--GGATGTTTGCAGGACC---TGGGTGTGC------ATAAGGA------------GTGTTTGCTGTG--GGCTCTTGGAGATTTCTGTCAAGAAAAGTGCTC-----CTTGG----------------------TGTCGCCCCAAGATCATAGCAAATCACAGAGTT-------ACCTTGCTTCCCATAATG-ACTT--------------------C-----AGCTCAAGACCGTCTAC-CTTCTCCGACAG i mm10.chr14 C 0 I 295 s canFam3.chr4 27808171 416 + 88276631 GCGGGGGCAGAGTCCCCTAAACTTGGACATCGGCACGTT-AAGACCTCCTCCGAATTGGTGAGGG----CCACTCCGAGGAACCTCTA----GAGAGTTTCCCAATGGACTC-CCCAGTCTC-----TGTTCATTAGGACCTCTGCGCTCACCCCCATTTGAGATGGCTTGGTCCCCAGAGTCTAGAGGGGTTTGGATGTTGGGAGGAAAAAGGGGATGTGTTGCTAGATGAAGAAGTGG-----GGGAGGTTGCAGTG--GAGGCCTTGATCTTTTGGGCAAGAGAGGTGCCCCCGCCCCAGGTGTCACCATGAGACTACCACCTTGTCTC----AGAG-AAGGCAAATCAATGGGACCACAGAAACCTCG--TACCCCGACGCACTAACGGAGGATCCACACTCCCACTCCAGAGCCAAGAACTATTCTGCCTTCCTTTATAG i canFam3.chr4 M 1414 C 0 a score=421018.000000 s hg38.chr10_KI270825v1_alt 166479 154 + 188315 CC-----GTTTGTGGACACATACTGCTTACCTCCCTGACTGCAGGACAAGGTCCTTCAAAGCTGGAA-----CTCTGACTGCGCTCAGTGA-TCCCGCAGTGCTCCTCTGTAGAGTGGGAACCCAGGTCCATTTCAAATATCTACGTTGGAATGAGTGGATCTCG s panTro4.chr10 76545165 154 + 133524379 CC-----GTGTGTGGACACATACTGCTTACCTCCCTGACTGCAGGACAAGGTCCTTCAAAGCTGTAA-----CTCTGACTGCGCTCAGTGA-CCCCGCAGTGCTCCTCTGTAGAGTGGGAACCCAGGTCCATTTCAAATATCTACGTTGGAATGAGTGGATCTCG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76213680 154 - 133410057 CC-----GTTTGTGGACACATATTGCTTACCTCCCTGTCTGCAGGACAAGGTCCTTCAAAGCTGGAA-----CCCTGACTGTGCTCAGTGA-CCCCGCAGTGCTCCTCTGTAGAGTGGGAACCCAGGTCCATTTCAAATATCTGCGTTGGAATGAGTGGATCTCG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35149555 154 + 104879549 CC-----GTTTGTGGACACATACTGCTTACCTCCCTGACTGCAGGACAAGGTCCTTCAAAGCTGGAA-----CCCTTACTGCGCTCAGTGA-CCCTGCAGTGCTCCTCTGTAGGGTGGGAACCAAGGTCCATTTCAAATATCTGCGTTGGAATGAGTGGATCTCG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73941243 142 - 130959383 CCCAGCCGTTTGTGGACACATACTGCTTACCTCCCTGACTGCAGGACAAGGTCCTTCAAAGCTAGAA-----CCCTGACTGCGCTCAGTGA-CCCCGCAGTGCTCCTCT-----------------GTCCATTTCAAACATCTGCGATGGAATGAGTGGATCTCG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75502616 142 - 133195287 CCCAGCCGTTTGTGGACACATACTGCTTACCTCCCTGACTGCAGGACAAGGTCCTTCAAAGCTAGAA-----CCCTGACTGCGCTCAGTGA-CCCCGCAGTGCTCCTCT-----------------GTCCATTTCAAACATCTGCGATGGAATGAGTGGATCTCG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73365630 142 - 125196307 CCCAGCCGTTTGTGGACACATACTGCTTACCTCCCTGACTGCAGGACAAGGTCCTTCAAAGCTAGAA-----CCCTGACTGCGCTCAGTGA-CCCCGCAGTGCTCCTCT-----------------GTCCATTTCAAACATCTGCAATGGAATGAGTGGATCTCG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72198308 142 - 125710982 CCCAGCTGTTTGTGGACACATACTGCTTACCTCCCTGACTGCAGGACAAGGTCCTTCAAAGCTAGAA-----CCCTGACTGCGCTCAGTGA-CCCCGCAGTGCTCCTCT-----------------GTCCATTTCAAATATCTGCGATGGAATGAGTGGATCTCG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75657727 140 - 121768101 CT-----GTTTGTGGACACATACAGCTTACCTCCCTGACTGC------AGGTCCTTCAGAGCTGGAG-----CCCGGACTGCACCCCGTGACCCCCTCAGTGCACCTCTGTAGAGTGGGAACCCAGA-----TTGGAATA----AGTTGGAATGAGTGGATCTCT i calJac3.chr12 C 0 C 0 s canFam3.chr4 27808587 155 + 88276631 -----CCTTTTGCGGACACATGCCACTTACCTTCC-ACCTGCAGGAGGTGGTCCTT-AAAACTGGAGCGCCCCACTGTTTGCTCTCAGCAA-CCCCACCCCGCTAGTAT--GAAGTGGGATCTCAGGACCATGGCAAATGTCTGCCTCGGCGTGAATGCATCTCA i canFam3.chr4 C 0 I 209 e mm10.chr14 24246444 295 + 124902244 I a score=217615.000000 s hg38.chr10_KI270825v1_alt 166633 69 + 188315 CTG-------GGGGTGAGAGGCACTTTGTCTACCCACACTGCCAGTCCCAGCCACA-TGCCTCCTCCCTTCCCTCAA s panTro4.chr10 76545319 69 + 133524379 CTG-------GGGGTGGGAGGCACTTTGTCTACCCACACTGCCAGTCCCAGCCACC-TGCCTCCTCTCTTCCCTCAA i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76213834 69 - 133410057 CTG-------GGGGTGGGAGGCACTTTGTCTACCCACACTGCCAGTCCCAGCCACA-TGCCTCCTCTCTTCCCTCAA i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35149709 69 + 104879549 CTG-------GGGGTGGGAGTCACTTTGTCTACCCACACTGCCAGTCCCAGCCACA-TGCCTTCTCTCTTCCCTCAA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73941385 69 - 130959383 CTG-------GGGGTTGGGGCCACTTTGTCTACCCACACTGCCAGTCCCAGCCACA-TGCCTCCCCTCTTCCCTCAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75502758 69 - 133195287 CTG-------GGGGTGGGGGCCACTTTGTCTACCCACACTGCCAGTCCCAGCCACA-TGCCTCCCCTCTTCCCTCAA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73365772 69 - 125196307 CTG-------GGGATGGGGGCCACTTTGTCTACCCACACTGCCAGTCCCAGCCACG-TGCCTCCCCTCTTGCCTCAA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72198450 69 - 125710982 CTG-------GGAGTGGGGGCCACTTTGTCTACCCACACTGCCAGTCCCAGCCACA-TGCCTCCCCTCTTCCCTCAA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75657867 76 - 121768101 CTGAGGACCTGGGGTGGGGGGCGCTTTGTCTACCAACACTGCCAGTCCCAGCCATA-CGCTTCCTCTCTTCCCTCAA i calJac3.chr12 C 0 C 0 s canFam3.chr4 27808951 68 + 88276631 CTA-------GAGGCCAAGGGTGCCTTTTCTCCAGACATT--CACTTCCACCCCCACCACTTCCTTTCCCGCCTCCA i canFam3.chr4 I 209 C 0 e mm10.chr14 24246444 295 + 124902244 I a score=1512006.000000 s hg38.chr10_KI270825v1_alt 166702 428 + 188315 AAAGCAGTGTCTTCTT----AGTCTGCTTCTTCAAGGGG----AGAAGTCGTTTTTATTT-ATGGAAACGAACTCACTATATGGTAGAAAGAACAAGAGTA---TCAGAATTTGCACTTTGGACTTGGACTCCCCTCTAAGCAG--CTGCACAA-GGT-GGAACA-AACCAATAATCCTTGCTGATCTG--TTTTGTCCTTAGGAAAAATGGTGGAGGGAGAA--TATTAGATcaggggttctt--agccttggcttcatgaat-aagctcaaggatgtcaatgaag--------------------cttttgac----atgatctcaacttttttgtgaac------atttatatatttttctggaatgggg----------------tccatagagtt-a-caagttctttaagacctcc--------agatggaccccaaTATGGCAGAAATGAACTATTTAAAGATACCTGCCTGCTCCCGTAGTCTGACCCTCTATGGCTAAG s panTro4.chr10 76545388 429 + 133524379 AAAGCAGTGTCTTCTT----AGTCTGCTTCTTCAAGGGG----AGAAGTCGTTTTTATTT-ATGGAAACGAACTCACTATATGGTAGAAAGAACAAGAGTA---TCAGAATTTGCACTTTGGACTTGGACTCCCCTCTAAGCAG--CTGCACAA-GGT-GGAACA-AACCAATAATCCTTGCTGATCTG--TTTTGTCCTTAGGAGAAATGGTGGAGGGAGAA--TATTAGATcaggggttctt--agccttggcttcatgaat-aagctcaaggatgtcaatgaag--------------------cttttgac----atgatctcaacttttttgtgaac------atttatatatttttctggaatgggg----------------tccatagagtt-atcaagttctttaagacctcc--------agatggaccccaaTATGGCAGAACTGAACTATTTAAAGATACCTGCCTGCTCCCGTAGTCTGACCCTCTATGGCTAAG i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76213903 437 - 133410057 AAAGCAGTGTCTTCTT----AGTCTGCTTCTTCAAGGGG----AGAAGTCGTTTTTATTT-ATGGAAACGAACTCACTATATGGTAGAAAGAACAAGAGTA---TCAGAATTTGCACTTTGGACTTGGACTCCCCTCTAAGCAG--CTGCACAA-GGT-GGAACA-AACCAATAACCCTTGCTGATCTG--TTTTGTCCTCAGGAGAAATGGTGGAGGGAGAATGTATTAGATcaggggttctt--agccttggcttcatgagt-aagctcaaggatgtcaatgaag--------------------cttttgac----atgatctcaacttttttgtgaacataaatatgaatatatttttctgggatgggg----------------tccatagagtt-accaagttctttaaggCCTCC--------AAATGGACCCCAGTATGGCAGAACTGAACTATTTAAAGATACCTGCCTGCTCTGGTAGTCTGACCCTTTATGGCTAAG i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35149778 427 + 104879549 AAAGTAATGTCTTCTT----AGTCTGCTTCTTCAAGGGG----AGAA---GTTTTTATTT-ATGGAAATGAACTCACTATATGGTAGAAAGAACAGGAGTA---TCAGAATTTGCACTTTGGACTTGGACTCCCCTCTAAGCAG--CTGCACAA-GGT-GGAACA-AAGCAATAACCCTTGCTGATCTG---TTTGGCCTCAGGAGAAATGGTGGAGGGATAATGTATTAGATcaggggttctt--agccttggcttcatgaat-aagctcaaggatgtcaatgaag--------------------cttttcac----atgatctcaacttttttgtgaac------atttatatatttttctgggatgggg----------------tccatagagtt-atcaagttctttaaggcctcc--------agatggaccccaaTATGGCAGAACTGAACTATTTAAAGATACCTGCCTGCTCTGGTAGTCTGACCCTCTATGGCTAAG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73941454 431 - 130959383 AAAGCAACGTCTTCTT----AGTCTGCTTCTTCAAGGGG----AGAAGTCGTTTTTATTT-ATGGAAACGAACTCATTATATGGTAGAAAGAACAAGAGTA---TCAGAATTTGCACTTTGGATTTGGACTCCCCTCTGAGCAG--CTGCACAA-GGT-GGAACA-AAGCAATAACCCTTGCCGATGTG--TTTTGTCCTCAGGAGAAATGGTGGAGGGACAATGTATTAGATGaggggttctt--agccttggcttcatgaat-aagcttaaggatgtcaatgaag--------------------cttttgac----atgatctcaacttttttgtgaac------atttatgtattttactgggaagagg----------------tccatagagtt-atcaagttctttaaggcctcc--------agatggaccccaaTATGGCAGAACTGAACTATTTAAAGATACCTTCCTGCTCCGGTAGTCTGACCCTCTATGGCTAAG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75502827 431 - 133195287 AAAGCAACGTCTTCTT----AGTCTGCTTCTTCAAGGGG----AGAAGTCGTTTTTATTT-ATGGAAACGAACTCATTATATGGTAGAAAGAACAAGAGTA---TCAGAATTTGCACTTTGGATTTGGACTCCCCTCTGAGCAG--CTGCACAA-GGT-GGAACA-AAGCAATAACCCTTGCCGATGTG--TTTTGTCCTCAGGAGAAATGGTGGAGGGAGAATGTATTAGATGaggggttctt--agccttggcttcatgaat-aagcttaaggatgtcaatgaag--------------------cttttgac----atgatctcaacttttttgtgaac------atttatgtattttactgggaagagg----------------tccatagagtt-atcaagttctttaaggcctcc--------agatggaccccaaTATGGCAGAACTGAACTATTTAAAGATACCTTCCTGCTCCGGTAGTCTGACCCTCTATGGCTAAG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73365841 431 - 125196307 AAAGCAACGTCTTCTT----AGTCTGCTTCTTCAAGGGG----agaagtcatttttattt-atggaaACGAACTCATTATATGGTAGAAAGAACAAGAGTA---TCAGAATTTGCACTTTGGATTTGGACTCCCCTCTGAGCAG--CTGCACAA-GGT-GGAACA-AAGCAATAACCCTTGCCGATGTG--TTTTGTCCTCAGGAGAAATGGTGGAGGGAGAATGTATTAGATGAGGGGTTCTT--AGCCTTGGCTTCATGAAT-AAGCTTAAGGATGTCAATGAAG--------------------CTTTTGAC----ATGATCTCAACTTTTTTGtgaac------atttatgtattttactGGCAAGAGG----------------TCCATAGAGTT-ATCAAGTTCTTTAAGGCCTCC--------AGATGGACCCCAATATGGCAGAACTGAACTATTTAAAGATACCTTCCTGCTCCGGTAGTCTGACCCTCTATGGCTAAG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72198519 431 - 125710982 AAAGCAACGTCTTCTT----AGTCTGTTTCTTCAAGGGG----AGAAGTCGTTTTTATTT-ATGGAAACGAACTCATAATATGGTAGAAAGAACAACAGTA---TCAGAATTTGCACTTTGGATTTGGACTGCCCTCTGAGCAG--CTGCACAA-GGT-GGAACA-AAGCAATAACCCTTGCCGATCTG--TTTTGTCCTCAGGAGAAATGGTGGAGGGAGAATGTACTAGATGaggggttctt--agccttggcttcatgaat-aagtttaaggatgtcaatgaag--------------------cttttgac----atgatctcaacttttttgtgaac------atttatgtattttactgggatgagg----------------tccatagagtt-atcaagttctttaaggcctcc--------agatggaccccaaTGTGGCAGAACTGAACTATTTAAAGATACCTTCCTGCTCCGGTAGTCTGACCCTCTATGGCTAAG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75657943 454 - 121768101 AAAGCAACCTCTTCTT----AGCCTGCTTCTTCAAGGGG----AGAAGTTGTTTTAATTT-ATGGAAACAAACGCACTCTATAATAGAAAGAACAAGAGTA---TCAGAATTTGCACTTTGGTTTTGGACT-CCCTCTAAACAG--CTGCACAA-GGT-GGAACA-AAGCAATAACCCTTGCTGATCTG--TTTTGTCCTCAGGAGAAATAGTGGAGGAAGAATGTGTTAGATCAGAGGTTCTTAGAGCTTTGGCTTCATGAGT-AAGCTCAAGGATGTCAATGAAGTGACATTCTTGATCTCTTCATTGTTGACATCAATGATCT---CTTTTTTGTGAGC------ATTTGTGTATTTTTCTGGGATGGGG---------------ATCCATAGAGTT-ATGAAGATTTTTAAGGCCTCC--------ACATGGACCCCAATATGGCAGAACTGAACTAGTTAAAGATACCTGCCTGCTTGGGTAATCTGAGGCTCTATGGCTAAG i calJac3.chr12 C 0 C 0 s mm10.chr14 24246739 418 + 124902244 AAAGCAAAGACATCTC---AAATGTCCTTCTTTGACAGAAGCCAGAAGCCATGTTTGTTT-ATAGAAACAAACTC--TGAATAGTGATTAGACCAAGAAGACCCTCAGAA---------TGATGGTGGAC---------GATGT--CAGAATGATGGT-GGAAGAGAACCAATTACATTCCCTCACCTA--GTAT-TTTTCAGGAGAA--GGGGGATGAGAAGAGCATCAAACcaggggttctc--agctgtagcttcatgagc-aagttcagcagggtctgtgtgg--------------------c-gctgaa----acaatctcaacactattgtgaac------gtgtg-----ttttctgggctgggt----------------ttgatagcttt-atca--ttttttaaggcttctataacccAACATGGATTCCAATATGCTGGAGCAAAACCATTTGAAGATCCCTCTCTGATCAGATAGCCTGGGCTTCTGTGACCAAG i mm10.chr14 I 295 I 2116 s canFam3.chr4 27809019 451 + 88276631 AAAGCAAAATTTTCTTCAAGATTCTGCTTCTTTAAGGGG----AGGAGTCACTTTTATTTGATAGAAACGAACTCTATACACAGTGGTTAGAACAAGGGAA---CCAGAATTTGCACTTCGCTTTTGGATTGCCCTTTAAATATACCTGTGCAA-GGTGGGAGCA-AATCAATTACGCTGGCTGGCCTCCCCTTGCTCCTCAGGA-AAACGGTAGA--AAGAGTGTGTTTAATcaggggttatc--agcctcgggtccatgaataaagctagagggtgtcagtgaag--------------------attttgaa----atgatctgaacatttttgtagac------acaggtgtattt--ctgggatggggttggggtggagggtggtctatagctttgattagcttctttaaggcctcc--------at---gactccaaaaTGACAGAGCTAAATTATTTTTAAAAGCCTCCCTGCTCAGATCGTCTGGGCTTCTATAGCTGAG i canFam3.chr4 C 0 C 0 a score=472890.000000 s hg38.chr10_KI270825v1_alt 167130 143 + 188315 CAAGGTTTTAGAGGAGTGGAAGGCTGGCCATTGC-ACAGTATCAGGGTTCCAGACAGGCTCCCTGGCTCTTCCCTCCCA------GTCCTGCTCCTG-AGATATAG---TTCTTTCTGGCCGCCACTTCCCTTAGGGCAACCCCAGAGCTTAAA- s panTro4.chr10 76545817 143 + 133524379 CAGGGTTTTAGGGGAGTGGAAGGCTGGCCATTGC-ACAGTATCAGGGTTCCAGACAGGCTCCCTGGCTCTTCCCTCCCA------GTCCTGCTCCTG-AGATAGAG---TTCTTTCTGGCCGCCACTTCCCTTAGGGCAACCCCAGAGCTTAAA- i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76214340 144 - 133410057 CAAGGTTTTAGGGGAGTGGAAGGCTGGCCATTGC-ATAGTATCA-GGTTCCAGACAGGCTCCCTGGCTCTTCCCTCCCA------CTCCTGCTCATGAAGATATAGT--TTCATTTCTGCCGTCACTTCTCTTACGGCAACCCCAGAGCTTAAA- i ponAbe2.chr10 C 0 M 1310 s nomLeu3.chr18 35150205 147 + 104879549 CAAGGCTTTAGGGGAGTGGAAGGCTGGCCATTGCAACAGTATCAGGGTTCCAGATAGGCTCCCTGGCTCTTCCCTCCCA------CTCTTGCTCCTG-AGATACAGTTCTTCTTTCTGGCCGCCACTTCCCTTAGGGCAACCCCAGAGCTTAAA- i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73941885 146 - 130959383 CAAGGTTTTAAGGGAGTGGAAGGCTGGCCATTGC-ACAGTATCAGGGTTCCAGACAGGCTCCCTGACTCTTCCCTCCCA------CTCCTGCTCCTG-AGATACAGTTCTTCTTTCTGGCTGCCAGTTCCCTTTGGGCAACTCCAGAGCTTAAA- i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75503258 146 - 133195287 CAAGGTTTTAAGGGAGTGGAAGGCTGGCCATTGC-ACAGTATCAGGGTTCCAGACAGGCTCCCTGACTCTTCCCTCCCA------CTCCTGCTCCTG-AGATACAGTTCTTCTTTCTGGCTGCCAGTTCCCTTTGGGCAACTCCAGAGCTTAAA- i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73366272 146 - 125196307 CAAGGGTTTAAGGGAGTGGAAGGCTGGCCATTGC-ACAGTATCAGGGTTCCAGACAGGCTCCCTGACTCTTCCCTCCCA------CTCCTGCTCCTG-AGATACAGTTCTTCTTTCTGGCTGCCAGTTCCCTTTGGGCAACTCCAGAGCTTAAA- i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72198950 146 - 125710982 CAAGGTTTTAAGGGAGTGGAAGGCTGGCCATTGC-ACAGTATCAGGGTTCCAGACAGGCTCCCTGACTCTTCCCTCCCA------CTCCTGCTCCTG-AGATACAGTTCTTCTTTCTGACTGCCAGTTCCCTTTGGGCAACTCCAGAGCTTAAA- i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75658397 146 - 121768101 CAAGATTTTAGGGGAGTGGAAGGCTGGCCATTGC-ACAGTATCAGGGTTCCAGACAGGCTCCCTGGCTCTTCCCTCCCA------CTCCTGCCTCTG-AGATATAGTTCCTCTTTCTGGCTACCACTTTCCTTAAGGCAACCCCAGAGCTTAAA- i calJac3.chr12 C 0 C 0 s canFam3.chr4 27809470 145 + 88276631 CAAGGTTCTAGGGGAAGGGAAAGCTGGTTATTGC-ACA--------GGTCTAAACAGGCTCCCTCTAGCTGTCCCCCCACCCCACCCCCTGCCCCTG-AGACATGGGTCCCCCTTTTGGCCACCACCTCCTCTACAGCAACTGCAGAGCTGGAAA i canFam3.chr4 C 0 C 0 e mm10.chr14 24247157 2116 + 124902244 I a score=332141.000000 s hg38.chr10_KI270825v1_alt 167273 129 + 188315 TCATCTG-CAAGGCAGTCACCTTTCAGG---CACCTTTCATCCGGCACCTGTGTTCTTAGCTGGATTAACTAGAAAGCTAG--------------------TTGGAGGAAGGAAGGTGAAAGTGGAGGAAGGGGAAAAGAGGAAAAGTTGGAG s panTro4.chr10 76545960 129 + 133524379 TCATCTG-CAAGGCAGTCACCTTTCAGG---CACCTTTCATCCGGCACCTGTGTTCTTAGCTGGATTAACTAGAAAGCTAG--------------------TTGGAGGAAGGAAGGTGAAAGTGGAGGAAGGGGAAAAGAGGAAAAGTTGGAG i panTro4.chr10 C 0 C 0 s nomLeu3.chr18 35150352 129 + 104879549 TCATCTG-CAAGGCAGTCACCTTTCAGG---CACCTTTCATCTGGCATCTGTGTTCTTAGCTGGATTAACTAGAAAGCTAA--------------------GCGGAGGAAGGAAGATGAAAGTGGAGGAAGGGGAAAAGAGGAAAAGTTGGAG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73942031 129 - 130959383 TCATCTG-CAAGGCAGTCACCTTTCAGG---CACCTTTCACCTGGCACTTGTATTCTTAGCTGGATGAACTAGAAAGCTAG--------------------GTGAAGGAAGGAAGGCGAAAGTAGAGGAAGGGGAAAAGAGGAAAAGTTGGGG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75503404 129 - 133195287 TCATCTG-CAAGGCAGTCACCTTTCAGG---CACCTTTCACCTGGCACTTGTATTCTTAGCTGGATGAACTAGAAAGCTAG--------------------GTGAAGGAAGGAAGGCGAAAGTAGAGGAAGGGGAAAAGAGGAAAAGTTGGGG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73366418 129 - 125196307 TCATCTG-CAAGGCAGTCACCTTTCAGG---CACCTTTCACCTGGCACTTGTATTCTTAGCTGGATgaactagaaagctag--------------------gtgaaggaaggaaggcgaaagtagaggaaggggaaaagaggaaaagttgGGG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72199096 129 - 125710982 TCATCTG-CAAGGCAGTCACCTTTCAGG---CACCTTTCACCTGGCACTTGTATTCTTAGCTGGATGAACTAGAAAGCTAA--------------------GTGAAGGAAGGAAGGCGAAAGTAGAAGAAGGGGAAAAGAGGAAAAGTTGGGG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75658543 149 - 121768101 TCATCTA-CAAGGCAGTCACCTTTCAGG---CATCTTTCACCTGGCACCTGTGTTCTTAGCTGGATTAACTAGAGAGATAGCTGGAggaaggaaggggaaagtggaggaaggaaggggaaagtggaggaaggggaaaagagaaaaagTTGGAG i calJac3.chr12 C 0 C 0 s canFam3.chr4 27809615 121 + 88276631 TCATCCGACAAGGCATCCATCCTTCAGGACACACCTGAAGGACAGGACCTCTCTTCTTAGCTGGATCTACTATAAATCTAA-------------------------GGGATGAGAACGAA-------GGGGGGGGGAGGAGGAGAAGCTGGGG i canFam3.chr4 C 0 I 274 e mm10.chr14 24247157 2116 + 124902244 I e ponAbe2.chr10 76214484 1310 - 133410057 M a score=1408629.000000 s hg38.chr10_KI270825v1_alt 167402 630 + 188315 ACGAATCTGGCTTATGGTTAGAAGCATATTTTTTggccaggcaaagtggctcacgcctgtaatcccagcactttgggaggctgaggtaggcggattgcctgagctcaggagttggagaccagcctggccaacgt-ggtaaaaccccgtctctaacaaaaatacaaaaatttagccaggcatgatggtgcaagcctgtaatcccagctgttc-aggaggctgaggcatgagaattgcttgaacccaggaggtggaggttgcagtgagctgaaattgcaccactgcact-ccaggctgggtgaccgagcaagactctgtctcaaaaaaaag------------aaaaaaaaaCttattttttgagacagagtctcactctgtcgcccaggctggattgcagtggggcaaacacagttcactgcagcctcaatttcttgggctcaagcaactatcctgcctcagcctcccgaggagtagctgggatcataggtgcttgccaccacacctggctaattttttaaatattttgtagacacagggtcttgccacattgcccaggctggtcttgaactcctgggctcaagttatcctcccgcctcggtctcccaaagttctggaattacagatgttagttaccacCCGGACC s panTro4.chr10 76546089 638 + 133524379 ACGAATCTGGCTTATGGTTAGAAGCATATTTTTTggccaggcaaagtggctcacgcctgtaatcccagcactttgggaggctgaggtaggcggattgcctgagctcaggagttggagaccagcctggccaacgt-ggtaaaatcccgtctctaacaaaaatacaaaaatttagccaggcatgatggtgcaagcctgtaatcc--actgtccaaggaagctgaggcatgagaattgcttgaacccagaaggtggaggttgcagtgagctgaaattgcaccactgcact-ccagcctgggtgaccgagcaagactctgtctcaaaaaaaaa---aaaaaaaacaaaaaaaaaCttattttttgagacagagtctcactctgtcgcccaggctggattgcagtggggcaaacacagctcactgcagcctcaatttcttgggctcaagcaactatcctgcctcagcctcccgaggagtagctgggaccataggtgcttgccaccacacctggctaattttttaaatattttgtagacacagggtcttgccacattgcccaggctggtcttgaactcctgggctcaagttatcctcccgcctcggtctcccaaagttctggaattacagatgttagtcaccacCCGGACC i panTro4.chr10 C 0 C 0 s nomLeu3.chr18 35150481 627 + 104879549 ACTAATTTGGCTTATGGTTAGAAGCATATTTTTTggccaggcgaagtggctcacgcctgtaatcccagcactttgggaggctgaggtaggcggattgcctgagctcaggagttggagaccagcctggccaacatgggtaaaaccccgtctctaacaaaaatacaaaaatttagccaggcatgatggtgcatgactgcaatcccagctgttc-gggaggctgaggcatgagaatttcttgaacccagggggtgaaggttgcagtgagctgagattgcaccactgcagt-ccagcctaggtgacagagcaagactctgtctcaaaaacaa-------------acaaacaaaCttattttctgggacagagtctcactctgtcgcccaggctggattgcaatggggcaaacacagctcactgcagcctcaatttcttgggctcaagcaactatcctgcctcagcctccc---aagtagctgggaccataggtgcttgccaccacacctggctaatttttttaatattttgtagacacagggtcttgccacattgcccaggcaggtcttgaactcctgggctcaagttatcctcccgcctcagtcccccaaatttctagaattacagatacgagtcaccacCCAGACC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73942160 640 - 130959383 ACTAATTTGGCTTATGATTAGAAGCATATTTTTTAgccaggtgaagtggctcacacctgtaatcccagcactttgggaggctgaggtaggcggattgcctgtgctcaggagttggagaccagcctggccaacat-ggtaaaaccctgtctctaccaaaaatataaaaatttagccaggcatgatggtgcatgcctgtaatcccagctattc-gggaggctgaggcaggagaattgcttgaactcgggaggtggaggttgcagtgagctgagactgcaccactgcactcccagcctgggtgacagagcaagactccgtctcaaaaaacaaacaaacaaacaaataaaaaaacaTAttttttaagacagagtctctctctttcacccaggctggattgcaatgaggcaaacacagctcactgcagcctcaatatcttgggctcgggcaactatcctgcctcagcctccc---aagtagctgggaccataggtgcttgacaccacacctggctaatttttctaatattttgtagacacagggtcttgccacattgtccaggctggtcttgaactcctgggctcaagttatcctcccacctttgtcccccaaagttctgggattacagatgttagtcaccacCTGGACC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75503533 639 - 133195287 ACTAATTTGGCTTATGATTAGAAGCATATTTTTTAgccaggtgaagtggctcacacctgtaatcccagcactttgggaggctgaggtaggcggattgcctgtgctcaggagttggagaccagcctggccaacat-ggtaaaaccctgtctctaccaaaaatataaaaatttagccaggcatgatggtgcatgcctgtaatcccagctattc-gggaggctgaggcaggagaattgcttgaactcgggaggtggaggttgcagtgagctgagactgcaccactgcact-ccagcctgggtgacagagcaagactccgtctcaaaaaacaaacaaacaaacaaacaaaaaaacaTAttttttaagacagagtctctctctttcacccaggctggattgcaatgaggcaaacacagctcactgcagcctcaatatcttgggctcgggcaactatcctgcctcagcctccc---aagtagctgggaccataggtgcttgacaccacacctggctaatttttctaatattttgtagacacagggtcttgccacattgtccaggctggtcttgaactcctgggctcaagttatcctcccaccttggtcccccaaagttctgggattacagatgttagtcaccacCTGGACC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73366547 639 - 125196307 ACTAATTTGGCTTATGATTAGAAGCATATTTTTTAGCCAGGTGaactggctcacacctgcaatcccagcactttgggaggctgaggtaggcggattgcctgcgctcaggagttggagaccagcctggccaacat-ggtaaaaccccgtctctaccaaaaatataaaaatttagccaggcatgatggtgcatgcctgtaatcccagctattc-gggaggctgaggcatgagaattgcttgaactcgggaggtggaggttgcagtgagctgagactgcaccactgcact-ccagcctgggtgacagagcaagactctgtctcaaaaaacaaacaaacaaacaaacaaaaaaacatattttttaagacagagtctctctctttcacccaggctggattgcaatgaggcaaacatagctcactgcagcctcaatttcttGGGCTCGGGCaactatcctgcctcagcctccc---aagtagctgggaccataggtgcttgacaccacacctggctaatttttctaatattttgtagacacagggtcttgccacattgtccaggctggtcttgaactcctgggctcaagttatcctcccaccttggtcccccaaagttctgggattacagatgttagtCACCACCTGGACC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72199225 620 - 125710982 ACTAATTTAGCTTATGATTAGAAGCATATTTTTTAGCCACGTGAAgtggctcacacctgtaatcccagcactttgggaggctgaagtaggcggattgcctgcgctcaggagttggagaccagcct-gccaacat-ggtaaaaccccgtccctaccaaaaatataaaaatttagccaggcatgatggtgcatgcctgtaatcccagctattc-gggaggctgaggcatgagaattgcttgaactcgggaggtggaggttgcagcgagctgagactgcaccactgcact-tcagcctgggtgacagagcaagactccgtctcagaaaaaaa--------------aaaacaaCATAttttttaagacagag----tctctttcgcccaggctggattgcaatgaggcaaacacagctcactgcagcctcaatttcttgggctcaggcaactatcctgcctcagcctccc---aagtagctgggaccataggtgcttgacaccacacctggctaatttttctaatattttgtagacatagggtcttgccacattgtccaggctggtcttgaactcctgggctcaagttatcctcccaccttggtcccccaaagttctgggattacagatgttagtcaccacCTGGACC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75658692 611 - 121768101 ACTAATTTGGCTTATGGTAAGAACCATATTTTCTGGTGAGGCAAAgtggctcatgcctgtaatcccaggactttcagaggctgaggagggcggattgcctgagctcaggacttggagatcagcctggccaacat-ggtaaaaccctgtctctaccaaaaatacaaaaatttagccaggcatggtggtgcacacctgtaatctcagctactt-gggagaccgaagcacgaaaattgcttgaacccgggaggtagaggttgcagtgaactgagattgcaccactggact-ccagcctgggcgacagagcaagactctgtc----aaagaaa--------------aaaaaaaC----tttttgagacag------tctctgtcgcccaggctggattgcagtggggcaaacaaagttaactgaagccttaacttcctgggctcaagcaactctcccgcctcagcctcca---gagtggctgggaccataggtgcttgccactatacctggctaattttattactattttgtagagacagggtcttgccacattgcccaggctggtcttgaaatccttggctcaagttatcctcctgcctcagtctcccaaagttctgagattacaggcgagagttaccacCCAGACC i calJac3.chr12 C 0 C 0 e canFam3.chr4 27809736 274 + 88276631 I e mm10.chr14 24247157 2116 + 124902244 I e ponAbe2.chr10 76214484 1310 - 133410057 M a score=666395.000000 s hg38.chr10_KI270825v1_alt 168032 246 + 188315 AATTTTAGGATTCCTTTAGCCAGTGACCTTGGTGTGACCTTGTACTTCTGCAGCA-TTTTATACCTTCTGCGGCACAC-----------------------CCTtgtagtgggtcgaattgtgtt------cccccaaaagatatgttctagtcctaattcccagtacctgtgaatgtga-cttatttagaaatagggtctttgcaga---tgtaatctagttcaaatgaggtcatactggattagggcgggtcctcatccaataactgttgttcttatt s panTro4.chr10 76546727 246 + 133524379 AATTTTAGGATTCCTTTAGCCAGTGACCTTGGTGTGACCTTGTACTTCTGCAGCA-TTTTATACCTTCTGCGGCACAC-----------------------CCTtgtagtgggtcgaattgtgtt------cccccaaaagatatgttctagtcctaattcccagtacctgtgaatgtga-cttatttagaaatagggtctttgcaga---tgtaatctagttcaaatgaggtcatactggattagggcgggtcctcatccaataactggtgttcttatt i panTro4.chr10 C 0 C 0 s nomLeu3.chr18 35151108 248 + 104879549 AATTTTAGGATTCCGTTAG-CAATGACCTTGGTGTGACCTTGTACTTCTGCAGCA-TTTTATACCTTCTGGGGCACAC-----------------------CCTtgtagtgggttgaattgtgtt------cccccaaaagatatgttctagtcctaactcccagtacctgtgaatgtga-cttatttagaaatagggtctttgcagatgttgtaatcaagttcaaatgaggtcatactggattagggcaggtcctcatccaataactggtgttcttatt i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73942800 245 - 130959383 AATTTTAGGATTCCTTTAGCCAGTGACCTTGGTGTGACCTTGTACTTCTGCAGCA-TTTTATACCTTCTGGGGCACAC-----------------------CCTtgtagtggcttgaattgtgtt------tccccaaaagatatgttcaagtcctaactcccagtacctgtgaatgtga-cttatttag-aatagggtctttgcaga---tgtaatcaagttcacatgaggtcatactggattagggcaggtcctcatccggtgactggtgttcttatt i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75504172 245 - 133195287 AATTTTAGGATTCCTTTAGCCAGTGACCTTGGTGTGACCTTGTACTTCTGCAGCA-TTTTATACCTTCTGGGGCACAC-----------------------CCTtgtagtggcttgaattgtgtt------tccccaaaagatatgttcaagtcctaactcccagtacctgtgaatgtga-cttatttag-aatagggtctttgcaga---tgtaatcaagttcacatgaggtcatactggattagggcaggtcctcatccggtgactggtgttcttatt i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73367186 245 - 125196307 AATTTTAGGATTCCTTTAGCCAGTGACCTTGGTGTGACCTTGTACTTCTGCAGCA-TTTTATACCTTCTGGGGCACAC-----------------------CCTTGTAGTGgcttgaattgtgtt------cccccaaaagatatgttcaagtcctaactcccagtacctgtgaatgtga-cttatTTAG-AATAGgctctttgcaga---tgtaatcaagttcacatgaggtcatactggattagggcagGTCCTCATCCGGTGACTGGTGTTCTTATT i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72199845 245 - 125710982 AATTTTAAGATTCCTTGAGCCAATGACCTTGGTGTGACCTTGTACTTCTGCAGCA-TTTTATACCTTCTGGGGCACAC-----------------------CCTtgtagtgggttgaattgtgtt------cccccaaaagatatgttcaagtcctaacactcagtacctgtgaatgtga-cttatttag-aatagggtctttgcaga---tgtaatcaagttcacatgaggtcatactggattagggcaggtcctcatccagtgactggtgttcttatt i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75659303 244 - 121768101 AATTTTAGGATTCCTTCAACCAATGACCTTGGTGTGACCTTGTACTTCTGCAGCA-TTTTATACCCTCTGGGGCACAT-----------------------CCTCATAGtgggttgaattgtatt------cccttaaaagatatgttcaagtcctaactcccagttcctgtgaa--tga-cttacttagaaataaggtctttgcaga---tgtaatcaagttcaaatgagatcatactggattagggtgggtcctcatccaatgactgctgttcttatt i calJac3.chr12 C 0 C 0 s canFam3.chr4 27810010 263 + 88276631 AACTTTAGCATTCCTTGAACCA-----------GTGACCTTATATTTCTGTAGCATTTTTATACCCTTCAGGGCACCTTCTCACACACTATTTCCCTTGTGCCCtgttctgggttgaactgtacccccccacccccaaaagatatgttcaggccctaactcccagtacctgggaatgtgaccttatttggaaataaggtctttgcaga---tataatcaagttaaaataaggtcatccaggattagggtgagccctaa-cagatgactggggttctta-- i canFam3.chr4 I 274 C 0 e mm10.chr14 24247157 2116 + 124902244 I e ponAbe2.chr10 76214484 1310 - 133410057 M a score=1204939.000000 s hg38.chr10_KI270825v1_alt 168278 452 + 188315 agaatagggaaatttggatgcaga----gacaca---g--------agaaaatgccatgt-------------gaagatgg-atcagagacagaagtgatgcggctgcaagccaaggaatgtgaagaatggccagccaccaccggaagctaggggagacgccagcacagattctccctgagagtatccagaag-aaaccaaccctc-caacacctggatttcagacttctgaccttgagaa----gtgtgagc-caataaaacaactgcagtggagtcagtggttcttgttttaagccacccagtttgtggtcattggttatggcagtcctaagaaactCAAACTCACCTCAGCACAGTGG-GGAGGTGAGAAG-GACAAAGACGGGGGTCCCTATTTTACAAATCA-CCCTATCACTTCACTCTTCTACTGCCTAAGGACATC-----------TCTGTAGATTTACCCACCTTTCCTACT-----TTCTTCTGGTCTTAGAAAAA s panTro4.chr10 76546973 452 + 133524379 agaacagggaaatttggatgcaga----gacaca---g--------agaaaatgccatgt-------------gaagatgg-atcagagacagaagtgatgcggctgcaagccgaggaatgtgaagaatggccagccaccaccggaagctaggggagacgccagcacagattctccctgagagtatccagaag-aaaccaaccctc-caacacctggatttcagacttctgaccttgagaa----gtgtgagc-caataaaacaactgcagtggagtcagtggttcttgttttaagccacccagtttgtggtcattggttatggcagtcctaagaaactCAAACTCGCCTCAGCACAGTGG-GGAGGTGAGAAG-GACAAAGACGGGGGTCCCTATTTTACAAATCA-CCCTATCACTTCACTCTTCTACTGCCTAAGGACATC-----------TCTGTAGATTTACCCACCTTTCCTACT-----TTCTTCTGGTCTTAGAAAAA i panTro4.chr10 C 0 C 0 s nomLeu3.chr18 35151356 450 + 104879549 agaatagggaaatttggatgcaga----gacaca---g--------agaaaatgccatgt-------------gaagatgg-atcagagactgaagtgatgcggctgcaagccgaggaatgtg-agaatggccggccaccaccggaagctaggggggacgccggcacagattct-cctgagagcctccagaagaaaaccaaccctc-caacaactagatttcagacttctgaccttgagaa----gtgtgagc-caataaaacaactgcagtggagtcagtggttcttgttttaagccacccagtttgtggtcattggttatggcagtcctaagaaactCAAACTCGCCTCAGCACAGTGG-GCAGGTGAGAAG-GACAAAGAC-TGGGTCCCTATTTTACAAATCA-CCCAATCACTTCACTCTTCTACTGCCTAAGGACATC-----------TCTGTAGATTTACCCACCTTTCCTACT-----TTATTCTGGTCTTAGAAAAA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73943045 452 - 130959383 agaatagggaaatttggatgcaga----gacaca---g--------agaaaatgccacgt-------------gaagatgg-atcagagactgaaatgatgcggccacaagccgaggaatgtgaagaatgggtggccaccaccagaagctaggggagacgccggcacagattctccctgagagcctccagaag-aaaccaaccctg-caacacctggatttcagacttctgaccttcagaa----gtgtgagc-caataaaacaactgcagtggagtcagtggttcttgttttaagccacccagtttgtggtcattggttatggcagtcctaagaaactCAAACTCGAATCATCACAGTGG-GGAGGTGAGAAG-GACAAAGACTGGGGTCTTTATTTTACAAATCA-CCCTATCACTTCACTCTGCTGCTGCCTAAGGACATC-----------TCTGTAGATTTACTCACCTTTCCTACT-----TTCTTCCAGTCTTAGAAAAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75504417 452 - 133195287 agaatagggaaatttggatgcaga----gacaca---g--------agaaaatgccacgt-------------gaagatgg-atcagagactgaaatgatgcggccacaagccgaggaatgtgaagaatgggtggccaccaccagaagctaggggagacgccggcacagattctccctgagagcctccagaag-aaaccaaccctg-caacacctggatttcagacttctgaccttcagaa----gtgtgagc-caataaaacaactgcagtggagtcagtggttcttgttttaagccacccagtttgtggtcattggttatggcagtcctaagaaactCAAACTCGAATCATCACAGTGG-GGAGGTGAGAAG-GACAAAGACTGGGGTCTTTATTTTACAAATCA-CCCTATCACTTCACTCTGCTGCTGCCTAAGGACATC-----------TCTGTAGATTTACTCACCTTTCCTACT-----TTCTTCCAGTCTTAGAAAAA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73367431 452 - 125196307 AGAATAGGGAAATTTGGatgcaga----gacaca---g--------agaaaatgcCACGT-------------GAAGATGG-ATCAGAGACTGAAATGATGCGGCCACAAGCCGAGGAATGTGAAGAATGGGTGgccaccaccagaagctaggggaGACGCCGGCACAGATTCTCCCtgagagcctccagaag-aaaccaaccctg-caacacctggatttcagacttctgaccttcagaa----gtGTGAGC-CAATAAAACAACTGCAGTGGAGTCAGTGgttcttgttttaagccacccagtttgtggtcattGGTTATGGCAGTCCTAAGAAACTCAAACTCGAATCATCACAGTGG-GGAGGTGAGAAG-GACAAAGACTGGggtctttattttacaaatca-cCCTATCACTTCACTCTGCTGCTGCCTAAGGACATC-----------TCTGTAGATTTACCCACCTTTCCTACT-----TTCTTCCAGTCTTAGAAAAA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72200090 446 - 125710982 agaatagggaaatttggatgcaga----gacaca---g--------agaaaatgccatgt-------------gaagttgg-atcagagactgaaatgatgcggccacaagccgaggaatgtgaagaatggggggccaccaccagaagctaggggagacgccggcacagattctccttgagagcctccagaag-aaaccaaccctg-caacacctggatttcagacttctgaccttcagaa----gtttgagc-taataaaacaactgcagtggagtcagtggttcttgttttaagccacccagtttgtggtcattggttatggcagtcctaagaaactCAAACTCGAATCAGCACAGTGG-GGAGGTGAGAAG-GACAAAGACTGGGGTCTTTATTTTACAAATCA-CCCTATCACTTCACTCTTCTGCTGCCTAAGGACATC-----------TCTGTAGATTTACCCACCTTTCCTACT-----TTCTTCCAGTCTT------A i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75659547 456 - 121768101 ggaagaaggaaatttgggtgcaaa----gacacg---g--------agaaaatgccatgt-------------gaagatgg-atcacaggctaaagtgatgtggctgcaagccaaggaatgtgaagaatggctggccaccaccagaagccaggggagataccgacacagattctccctgacagcctccagaag-taaccgaccctgccaacacttggacttcagacttctgaccttgagaagtatgtatgaac-caataaaataactgcagtggagtcagtggttcttgttttaagccacccagtttgtggtcattggttatggcagtcctaagaaactCAAACTCACCTCAGCACACTGG-AGAAGTGAGAAACGACAAAGACTGAGGTCCCTATTTTACAAGTCA-CCCTATCACCTCACTCTTCTACTGCCTAA-GACGTC-----------TCTGTAGATTTACCCACCTTTCCTCCT-----TTCTTCCGGTCTTAGAAA-A i calJac3.chr12 C 0 C 0 s mm10.chr14 24249273 431 + 124902244 aaaaaagggaaatgtgaactcaga----cacccatggg--------ggcagatagcacat-------------gagtgggg-agcagagactggagtgataggtggaccagccagagg------agaagccatgggaagtaccagaggcaggagcaaggcctgggccacattctccctagtggccttcagagg--aaccaacttgg-caagcccttggttttgaactttcccccttaagaa----ctgtgaac-cagtaagcca----------------------ttgttttagac--cctagtttgtgtccagtttttatggaagctctaggaaacctata-------taTCACAAT-G-AGAAGTATGAAG-GA-AAAGAC-GGTGTCTCTATGTTCAAAACCACCCCTATCATCTCACTCTTCAACGGCCTAAATATTTCTTTCTCTCTCTTTTTTGGATTTATCTGCCTTTCTTCCCTTTGATTCCtcttcttttttaaaaa i mm10.chr14 I 2116 I 183 s canFam3.chr4 27810273 407 + 88276631 -gaagagggaaatttggacacaaatttccacaaa---gcagaaagcagagaatactatgtatttcgtctctaagaagatggaaacagagggtagagtgatgggtctaccagccaagtaacaccaaggactgccggcaaccaccagaagccagga---------------------------------cagaag---------cctg-gaatga-tggattccagacttctggcctccagaa----ccatgagcgccactagatttctgcc-------------tcctggttttaagtcctgctgcttatggtaatttgttatggtggccccagaaaacATGGATC-----CATCATGATGGAGGAGGTTTGAGG-GACAACGTGGGACATTCCCATTGTACAAGTCA-CCCGATCGC------CTATGACTGCCTCAGAATTTT-----------TCTGCAGATGCACCTACTTTTCCTTCT-----TTCTTCTGATCTTA------ i canFam3.chr4 C 0 C 0 e ponAbe2.chr10 76214484 1310 - 133410057 M a score=159561.000000 s hg38.chr10_KI270825v1_alt 168730 69 + 188315 GAGAGCTCCTTGTCTTTAAGGAGAGCC----CTTCCATGCTCTGGATATAATCTGTGTA-------------------------TCCCTCTCCT-CCCC s panTro4.chr10 76547425 69 + 133524379 GAGAGCTCCTTGTCTTTAAGGAGAGCC----CTTCCATGCTCTGGATATAATCTGTGTA-------------------------TCCCTCTCCT-CCCC i panTro4.chr10 C 0 C 0 s nomLeu3.chr18 35151806 70 + 104879549 GAGAGCTCCTCATCTTTGAGGAGAACC----CTTCCATGCTCTGGATATAATCTGTGTA-------------------------TCCCTCTCCTCCCCC i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73943497 69 - 130959383 GAGAGCTGCTCGTCTTTGAGGAGAGCC----CTTCCATGCTCTGGATATAATCTGTGTA-------------------------TCCCTCTCCT-CCCC i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75504869 69 - 133195287 GAGAGCTGCTCGTCTTTGAGGAGAGCC----CTTCCATGCTCTGGATATAATCTGTGTA-------------------------TCCCTCTCCT-CCCC i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73367883 69 - 125196307 GAGAGCTGCTCGTCTTTGAGGAGAGCC----CTTCCATGCTCTGGATATAATCTGTGTA-------------------------TCCCTCTCCT-CCCC i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72200536 69 - 125710982 GAGAGCTGCTCGTCTTTGAGGAGAGCC----CTTCCATGCTCTGGATATAATCTGTGTA-------------------------TCCCTCTCCT-CCCC i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75660003 66 - 121768101 GAGGGCCCCTCATC-TTGAGGAGGGCC----CTCCCATGCTCTGGA-ATAATCTGCCT--------------------------TCCCCCTCTC-CCCC i calJac3.chr12 C 0 M 477 s mm10.chr14 24249887 42 + 124902244 GGGAGTCTC---TCCATGAGAGAAACC----CCTTCATGTCCTGCACCT-------------------------------------------------- i mm10.chr14 I 183 C 0 s canFam3.chr4 27810680 98 + 88276631 CAGGGCCCCTCCTCCTTGAGAACAGCCCTTTCTTTCATGCTCTGGGTACAATCCCTGCAGTCTCAGCATAGGCCTGCACATGGTTCCCCCACCC-CCTC i canFam3.chr4 C 0 C 0 e ponAbe2.chr10 76214484 1310 - 133410057 M a score=40056.000000 s hg38.chr10_KI270825v1_alt 168799 22 + 188315 TGC-ACACACG--CACTCACACACA s panTro4.chr10 76547494 22 + 133524379 CGC-ACACACG--CACTCACACACA i panTro4.chr10 C 0 C 0 s nomLeu3.chr18 35151876 23 + 104879549 CGCAACACACG--CACTCACACACA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73943566 22 - 130959383 CCG-ACACATG--CGCTCACATACA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75504938 22 - 133195287 CCG-ACACACG--CGCTCACATACA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73367952 22 - 125196307 CCG-ACACATG--CGCTCACATACA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72200605 22 - 125710982 CCG-ACACATG--CGCTCACACACA i chlSab2.chr9 C 0 C 0 s mm10.chr14 24249929 24 + 124902244 TCC-ACACAGGACCACACACCTTCT i mm10.chr14 C 0 C 0 s canFam3.chr4 27810778 22 + 88276631 cac-acacaca--cacacacacaca i canFam3.chr4 C 0 I 23 e ponAbe2.chr10 76214484 1310 - 133410057 M e calJac3.chr12 75660069 477 - 121768101 M a score=80978.000000 s hg38.chr10_KI270825v1_alt 168821 43 + 188315 GTCTGCTTCTGCTTTGGTTTGGGCTCCTTCTCATTTGTCAAAA s panTro4.chr10 76547516 43 + 133524379 GTCTGCTTCTGCTTTGGTTTGGGCTCCTTCTCGTTTGTCAAAA i panTro4.chr10 C 0 C 0 s nomLeu3.chr18 35151899 43 + 104879549 GTCTGCCTCTGCTTTGGTTTGGGTCCCTTCTCATTTGTCAAAA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73943588 43 - 130959383 GTGGGCTTCTGCTTTGGTTTGGGCCCCTTCTCATTTGTCAAAA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75504960 43 - 133195287 GTGGGCTTCTGCTTTGGTTTGGGCCCCTTCTCATTTGTCAAAA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73367974 43 - 125196307 GTCGGCTTCTGCTTTGGTTTGGGCCCCTTCTCATTTGTCAAAA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72200627 43 - 125710982 GTCGGCTTCTGCTTTGGTTTGGGCCCCTTCTCATTTGTCAAAA i chlSab2.chr9 C 0 C 0 s mm10.chr14 24249953 40 + 124902244 CTCTCCTTGTGCTCT-GTCAGGCCTCCTCCTC--TTGCCTGCA i mm10.chr14 C 0 C 0 e canFam3.chr4 27810800 23 + 88276631 I e ponAbe2.chr10 76214484 1310 - 133410057 M e calJac3.chr12 75660069 477 - 121768101 M a score=9184.000000 s hg38.chr10_KI270825v1_alt 168864 3 + 188315 ACA s panTro4.chr10 76547559 3 + 133524379 ACA i panTro4.chr10 C 0 C 0 s nomLeu3.chr18 35151942 3 + 104879549 ACA i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73943631 3 - 130959383 ACA i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75505003 3 - 133195287 ACA i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73368017 3 - 125196307 ACA i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72200670 3 - 125710982 ACA i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75660550 3 - 121768101 ACA i calJac3.chr12 M 477 C 0 s mm10.chr14 24249993 2 + 124902244 -CA i mm10.chr14 C 0 C 0 e canFam3.chr4 27810800 23 + 88276631 I e ponAbe2.chr10 76214484 1310 - 133410057 M a score=149545.000000 s hg38.chr10_KI270825v1_alt 168867 52 + 188315 GGCTTGAGTCTCCCCATTCTCAAGGGTCCTCCCTT-TCCTCTCATGTTTCCTT s panTro4.chr10 76547562 52 + 133524379 GGCTTGAGTCTCCCCATTCTCAAGGGTCCTCCCTT-TCCTCTCATGTTTCCTT i panTro4.chr10 C 0 C 0 s nomLeu3.chr18 35151945 52 + 104879549 GGCTTGAGTCTCCCCATTCTCAAGGGTCCTCCCTT-TCCTTTCACGTTTCCTT i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73943634 52 - 130959383 GGTTTGAGTCTCCTCATTCTCAAGGGTCCTCCCTT-TCCTCTCACGTCTCCTG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75505006 52 - 133195287 GGTTTGAGTCTCCTCATTCTCAAGGGTCCTCCCTT-TCCTCTCACGTCTCCTG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73368020 52 - 125196307 GGTTTGAGTCTCCTCATTCTCAAGGGTCCTCCCTT-TCCTCTCACGTCTCCTG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72200673 52 - 125710982 GGTTTGAGTCTCCTCATTCTCAAGGGTCCTCCCTT-TCCTCTCACGTCTCCTG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75660553 52 - 121768101 GGCTTGAGTCTCCCCATTCTCAAAGGTCCTCCCTT-TCCTCCCATGTTTCCTC i calJac3.chr12 C 0 C 0 s mm10.chr14 24249995 53 + 124902244 GGATTGGGGCTCCATATTCTCAGAGGCCCTTCTTTGTCCTGTCTTGTTTTTTT i mm10.chr14 C 0 N 0 s canFam3.chr4 27810823 46 + 88276631 GACCCCAGTCTCCCCATTCT--AGGGGCCT-CCTA-CCCTCTCTTATGTC--- i canFam3.chr4 I 23 C 0 e ponAbe2.chr10 76214484 1310 - 133410057 M a score=178155.000000 s hg38.chr10_KI270825v1_alt 168919 63 + 188315 CGGAAACAATCATTGCTTGACATTGGGACCTCCACAT-CTCATAGACTGCTCACCGCTTGGTTG s panTro4.chr10 76547614 63 + 133524379 CGGAAACAATCATTGCTTGACATTGGGACCTCCACAT-CTCATAGACTGCTCACCGCTTGGTTG i panTro4.chr10 C 0 C 0 s nomLeu3.chr18 35151997 63 + 104879549 CGGAAACAATCATTGCTTGACATTGGGACCTCCACAT-CTCATAGACTGCTCACTGCTTGGTTG i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73943686 63 - 130959383 CAGAAACAATCATTGCTTGACATTGGGACCTCCACAT-CTCATAGACTGCCTACTGCTTGGTTG i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75505058 63 - 133195287 CAGAAACAATCATTGCTTGACATTGGGACCTCCACAT-CTCATAGACTGCTTACTGCTTGGTTG i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73368072 63 - 125196307 CAGAAACAATCATTGCTTGACATTGGGACCTCCACAT-CTCATAGACTGCTTACTGCTTGGTTG i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72200725 63 - 125710982 CAGAAACAATCATTGCTTGACATTGGGACCTCCACAT-CTCATAGACTGCTCACTGCTTGGTTG i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75660605 63 - 121768101 CGGAAACAATCATTGTTTAACATTGGGACCTCCACAT-CTTGTAGACTGTTCACTGCTCGGTTG i calJac3.chr12 C 0 C 0 s canFam3.chr4 27810869 64 + 88276631 AGGAAAGAACCACTGCCCGACAGGGCGACCTCCACCCACTCATAGGCCGCTCACTCCTCAGTTG i canFam3.chr4 C 0 C 0 e ponAbe2.chr10 76214484 1310 - 133410057 M a score=41294.000000 s hg38.chr10_KI270825v1_alt 168982 23 + 188315 GTGCTTTACAAT-CAGCTTC------T-------TTT s panTro4.chr10 76547677 24 + 133524379 GTGCTTTACAAT-CAGCTTC-----TT-------TTT i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76215794 23 - 133410057 GTGCTTTACAAT-CAACTTC------T-------TTT i ponAbe2.chr10 M 1310 C 0 s nomLeu3.chr18 35152060 19 + 104879549 GTGCTTTACAAT-CAGCTTT----------------- i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73943749 28 - 130959383 GTGCTTTACAAT-CAGCTTC------TTTTAA--TTT i rheMac3.chr9 C 0 C 0 s macFas5.chr9 75505121 28 - 133195287 GTGCTTTACAAT-CAGCTTC------TTTTAA--TTT i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73368135 36 - 125196307 GTGCTTTACaat-cagcttcttttttttttaattttt i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72200788 35 - 125710982 GTGCTTTACAAT-CAGCttc-ttttttttttattttt i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75660668 23 - 121768101 TTGCTTTATAATCCAGCTTC--------------TTT i calJac3.chr12 C 0 C 0 s canFam3.chr4 27810933 21 + 88276631 GTGCTTTGCAATCCTCCTTC------T---------- i canFam3.chr4 C 0 N 0 a score=304830.000000 s hg38.chr10_KI270825v1_alt 169005 123 + 188315 TTTTTT-----------AATTCTTG----TGTTTGC-----------tttttttaaa----tttattttatttgtttttctggagacagagtcgcactctgtcac------ccaggctggagtgcagtggcgtgattttggctcactgcaacctccacc s panTro4.chr10 76547701 123 + 133524379 TTTTTT-----------GATTCTTG----TGTTTGC-----------tttttttaaa----tttattttatttgtttttctggagacagagtcgcactctgtcac------ccaggctggagtgcagtggcgtgattttggctcactgcaacctccacc i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76215817 124 - 133410057 TTTTTT-----------AATTATTG----TGTTTGC--------t--tttttttaaa----tttattttatttgtttttctggagacagagtcgcactctgtcac------ccaggccagagtgcagtggcatgattttggctcactgcaacctccacc i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35152079 131 + 104879549 ----TTAAAAAAAAAAAAATTCTTG----TGTTTGT--------TCGCtttttttaa----tttattttatttgtttttctggagagagagtctcactc--ttgc------ccgggctggagtgcagtggcgtgattttggctcactggaacctccact i nomLeu3.chr18 C 0 C 0 s rheMac3.chr9 73943777 128 - 130959383 TTTTTT-----------AATTCTTGCATTTGTTTtc--------t--ttttttaaaa----tttattttatttgtttttctggagacagagtctcactttgtcac------ccaggctggagtgtagtggcatgatttcagctcactgcaacctccacc i rheMac3.chr9 C 0 N 0 s macFas5.chr9 75505149 128 - 133195287 TTTTTT-----------AATTCTTGCATTTGTTTGC--------t--ttttttaaaa----tttattttatttgtttttctggagacagagtctcactttgtcac------ccaggctggagtgcagtggcgtgatttcagctcactgcaacctccacc i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73368171 129 - 125196307 tttttt-----------aattcttgcatttgtttgc-------tt--ttttttaaaa----tttattttatttgtttttctggagacagagtctcactttgtcac------ccaggctggagtgcagtggcgtgatttcagctcactgcaaccgccacc i papAnu2.chr9 C 0 C 0 s chlSab2.chr9 72200823 130 - 125710982 tttttt-----------AATTCTTGCATTTGTTTGC------TTt--ttttttttaa----tttattttatttgtttttctggagacagagtctcactttgtcac------ccaggctggagtgcagtggcgtgatttcagctcactgcaacctccacc i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75660691 140 - 121768101 TTTTTT-----------CATTCTTG----TGTTTAGGGGTTTTTT--ATtttttaggtttttttattttttttattttttttcagac--agtctcaatctgtccccaggcaccaggctggagtgcagtggcgccatcttggctcattgcaacctccacc i calJac3.chr12 C 0 C 0 a score=105714.000000 s hg38.chr10_KI270825v1_alt 169128 42 + 188315 tcccgggttcaagcgattctcctgcctcagcctcccgagtag s panTro4.chr10 76547824 42 + 133524379 tcccgggttcaagcgattctcctgcctcagcctcccaagtag i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76215941 42 - 133410057 tcccgggttcaagcgattctcctgcctcagcctcccgagtag i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35152210 42 + 104879549 tccagggttcaagcgattctcctgcctcagcctcccgagtag i nomLeu3.chr18 C 0 C 0 s macFas5.chr9 75505277 42 - 133195287 tcccgggttcaagcgattctcctgcctcagcctcccgagtag i macFas5.chr9 C 0 C 0 s papAnu2.chr9 73368300 42 - 125196307 tcccgggttcaagcgattctcctgcctcagcctcccgagtag i papAnu2.chr9 C 0 N 0 s chlSab2.chr9 72200953 42 - 125710982 tcccgggttcaagcgattctcctgcctcagccttccgagtag i chlSab2.chr9 C 0 C 0 s calJac3.chr12 75660831 42 - 121768101 tcccaggtttaagcaattctcctgtctcagcctcccgagcag i calJac3.chr12 C 0 C 0 a score=239704.000000 s hg38.chr10_KI270825v1_alt 169170 161 + 188315 ctaggactacaggtgcacaccaccaagcccggctaatttttgta-tttttagtagagacgggggtttctccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccgcctcggcctcccaaagtgctgggattacaggcatgagccacca s panTro4.chr10 76547866 161 + 133524379 ctaggactacaggtgcacaccaccaagcccggctaatttttgta-tttttagtagagacaggggtttctccatgttggccaggctggtctcaaactcctgacctcaggtgatccacccgcctcggcctcccaaagtgctgggattacaggcatgaaccacca i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76215983 161 - 133410057 ctaggactacaggtgcacaccaccaaacccggctaatttttgta-tttttagtagacacgggggtttctccatgttggccaggctggtctcgacctcctgacctcaggtgattcacccgcctcgggctcccaaagtgctgggattacaggcatgagccaccg i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35152252 160 + 104879549 ctgggactacaggtgcatgccaccaagctcggataatttttgta-tttttagtagagat-ggggtttcgccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccgccttggcctcccaaaatgctgggattacaggcatgagccacca i nomLeu3.chr18 C 0 C 0 s macFas5.chr9 75505319 160 - 133195287 ctggaactacaggtgcatgccactatgcccagctaatttttgta-tttttagtagagac-ggggtttcgccatgttggccaagctggtctcgaactcctgacctcaggtgatccacccaccttggcctcccaaagtactgggattacaggcatgagccactg i macFas5.chr9 C 0 C 0 s chlSab2.chr9 72200995 160 - 125710982 ctgggactacaggtgcacgccactatgcccggctaatttttata-tttttagtagagac-ggggtttcgccatgttggccaggctggtctcgaactcccgacctcaggtgatccgcccaccctagcctcccaaagtgctgggattataggtgtgagccacca i chlSab2.chr9 C 0 N 0 s calJac3.chr12 75660873 132 - 121768101 ctgggactataggtgtgcaccaccacgctcagctaatttttctattttttagtagagat-gagatttcaccatgttagccaggatggtctctatctcttgacctca--tgatctgcccgccttggcct---------------------------gccaCCA i calJac3.chr12 C 0 C 0 a score=517531.000000 s hg38.chr10_KI270825v1_alt 169331 533 + 188315 agcccagccTAttt-------------atttattttatt---------catttattggagacaagagtcttgctctgtcacccaggctggaatgcagtg---------ggctcactgcaacctctgcctcctaggctcaagtgattctcctgcctcagcctcctgagtagctgggattacaggtgcgtatgaccacacctggctaatttttttttttttttttttttttgagacggaatttcactcttgttgcccaggctggagtgcaatggcatgatctcagctcaccgcaacctccaccttccagattcaagcgattctcctgcttcagcctcctgagtagctgggattacaggcatgtgccaccacacctggctaat---tttgtatttttagtagagacggggtttctccatgttggtcaggctgg-------------------------------tctcgaactcccaacctcaggtgatctgccctcctcggcctcccaaagtgctgggattacaggtgtgagccaccacacctggcc-------ttaatttttgtatt--tttagtagagatgtggtttcaccatgttggccaagctgg s panTro4.chr10 76548027 530 + 133524379 agcccagccTAttt-------------atttattttatt---------catttattggagacaagagtcttgctctgtcacccaggctggaatgcagtg---------ggctcactgcaacctctgcctcctaggctcaagtgattctcctgcctcagcctcctgagtagctgggattacaggtgcgtatgaccacgcctggctaa---ttttttttttttttttttttgagacggaatttcactcttgttgcccaggctggagtgcaatggcatgatctcagctcaccgcaacctccaccttccaggttcaagcgattctcctgcttcagcctcctgagtagctgggattacaggcacgtgccaccacacctggctaat---tttgtatttttagtagagacacggtttctccatgttggtcaggctgg-------------------------------tctcgaactcccaacctcaggtgatctgcccttctcggcctcccaaagtgctgggattacaggtgtgagccaccacacctggcc-------ttaatttttgtatt--tttagtagagatgtggtttcaccatgttggccaagctgg i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76216144 531 - 133410057 cgcccagccTAttt-------------atttattttatt---------catttattggagac-agagtcttgctctgtcgcccaggctggaatgcagtg---------ggctcactgcaacctctgcctcctaggctcaagtgattctcctgcctcagcctcctgagtagctgggattacaggtgcatatgaccacacctggctaa-ttttttttttttttttttttttgagacggagtttcactcttgttgcccaggctggagtgcaatggcatgatctcggctcaccgcaacctccacattccaggttcaagcgattctcctgcttcagcctcctgagtagctgggattacaggcatgtgccaccacacccggctaat---tttgtaattttagtagagacggggtttctccatgttggtcaggctgg-------------------------------tctcgaactcccaacctcaggtgatctgccctccttggcctcccaaagtgctgggattacaggtgtgagccaccacacctggcc-------ttaatttttgtatt--tttagtagagatgtggtttaaccatgttggccaagctgg i ponAbe2.chr10 C 0 C 0 s nomLeu3.chr18 35152412 532 + 104879549 tgcccagccTAttt-------------atttattttatt---------tatttattggagac-agagtcttgctctgttgcccaggctggaatgcagtg---------ggctgactgcaacctctgcctcccgtgctcaagtgattctcctgcctcagcctcctgagtagctgggattacaggtgcatacgaccacacctggctaa---------ttttttttttttttgagatggagtttcactcttgttgcccagggtggagtgcaatggtgtgatctcagctcagggcaacctccaccttccaggtttaagcgattctcctgcttcagcctcctgagtagttgggattacaggcatgtgccaccacacccggctaat---tttgtaattttactagagacggggtttctccatgttggtcaggctgg-------------------------------tctcgaactcccgagctcaggtgatctgccatcctcggcctcccaaagtgctgggattacaggcatgagccaccgcgcccACCCTAtttatttatttattttatttatttattggagacagagtcttgctctgttgcccaggctgg i nomLeu3.chr18 C 0 N 0 s macFas5.chr9 75505479 528 - 133195287 tacccagccTAttt-------------atttattttatt---------tatttattggagac-agggtcttgctctgtcacccaggctggagtgcagtg---------ggctcactgcaacctctgcctcccaggctcaagtgattctcctgcctcagcctcctgagtagctgggattacaggtgtgtatgaccacacctggctac----attttttttttttttttttgagacggagtttcactcttgttgcccaggttggagtgcaatggcatgatcttggctcacggcaacctccacctcccaggttcaagctattctcctgcttcagcctcctcagtagctgggattacaggcatgcaccaccacacccggctaat---tttgtaattttagtagagacagggtttctccatgttggtcaggctgg-------------------------------tcttgaactcccgacctcaggtgatctgccctccttagcctcccaaagtgctgggattataggtgtgagccaccactactggcc-------ttaatttttgtatt--tttagtagaaacatggtttcaccatgttggccaagctgg i macFas5.chr9 C 0 C 0 s calJac3.chr12 75661005 527 - 121768101 CGCCCAGCCTAGTTTGTTTCTTTTTTAAtttattttattattattatatattt-ttggagac-agagtctcactctgtcacccagcctggggtgttttgcatgatctccgctcactgcaacctccgcttcccaggttcaagtgattctcctgcctcagcctcccaagtagctgggactacaggtgtgagccactacgcccgggtaa------tttttgtatttttagtagagatggggtttcac-catgttggccaggctgg-------------------------------tcttgaattcctgacctcaggtgatccacctgtagtggcctcccaaagtgctgggattacaggagtgagtcaccgcgcccagccTAtttatttatttatttatcggagacagagttttgctctgtcacccaggctggagtgcagtggcacgatcttggctcactgcaacctctgcctcccaggctcacgtgattctcctgcctcagcctcccaagtagctaggattaaagatacacaccaccatgcctggct---------aatttttgtatt--tttagtagca----------------------------- i calJac3.chr12 C 0 C 0 a score=40936.000000 s hg38.chr10_KI270825v1_alt 169864 51 + 188315 tcttgaacacctagcctcaagagatccacctcttgggcctcccaaagtgct s panTro4.chr10 76548557 51 + 133524379 tcttgaacacctagcctcaagagatccacctcttgggcctcccaaagtgct i panTro4.chr10 C 0 C 0 s ponAbe2.chr10 76216675 51 - 133410057 tcttgaacaactagcctcaagagatccacctcttgggcctcccaaagtgct i ponAbe2.chr10 C 0 N 0 s macFas5.chr9 75506007 51 - 133195287 tcttgaactcctagcctcaagagatccacctcttgggcctcccacagtgct i macFas5.chr9 C 0 C 0 s calJac3.chr12 75661532 50 - 121768101 -ctcgaactcctaatctcaggacatctgcctcttgggcctcccaaagtact i calJac3.chr12 C 0 C 0 a score=1746.000000 s hg38.chr10_KI270825v1_alt 169915 3 + 188315 gga s panTro4.chr10 76548608 3 + 133524379 gga i panTro4.chr10 C 0 N 0 s macFas5.chr9 75506058 3 - 133195287 gga i macFas5.chr9 C 0 N 0 s calJac3.chr12 75661582 3 - 121768101 gga i calJac3.chr12 C 0 N 0