##maf version=1 scoring=roast.v3.3 a score=68513.000000 s hg38.chr1_KI270707v1_random 0 751 + 32032 AGGGGTCTGCTTAGAGAGGGTCTCATTAGTGGGGTCTAGTAGTGG-GGTTTTGGTGAGTGGGGACCTATTGGCTGCCAGTTGTTTGGTGTCTGGTCAGTGCAAACCTGGGCTGTGGGGCTTGATCAGTGGAGACCTGGTCAGCTGGGGCTTAGTGCTGGCCTGGTCAGCATGGGCTGGGGCACTGGTGACCAGGTCAAGGGGTGCTATTCAGTGGAGGAGTGGGCACATGGGACCTAGTCAGCAGACCCTGGTGGGCGTGTcctcatcagtgaggtccttgtcagtggggccctggtcagggcagccttgtcagcgggacctaatctgtagcgtcctggtcagagaggacttggtcagtgGTGACTTTTGCAGTACTAGTCTACAGGGTGACCTGGTCAGCGGGGATCTCAGCATTTGGTGCCAGTTCAGTGGGGTCTACTCACTAGGGTCCCAGTCAGGGGCATCTGGTGATCTTAGGCCTGGTTATTAGGGGCCTGATCAGTGGCAACCTGTTCCCTGGaggtctggtcagtggggcctcatctttggggccagggaatgaggtcatgatcagtggaacctgatcagtgaggccttgtcaataatgacatagtcagtgaggacttgtcagtaaggacttggtccatgaggccttgtcagtgaggccttgtcagtaaggtcctggtcagtggagtccttgtcattgTGTGCCTGGCAGTGGGGCccttgttagtggggcctggtcatgagg s panTro4.chr4_GL389940_random 20146 750 - 103824 aggggtctgcttagagagggtctcattagtgGGGTCTAGTAGTGGCGGTTTTGGTGAGTGGGGACCTATTGGCTGCCAGTTGTTTGGTGTCTGGTCAGTGCAAACCTGGGCTGTGGGGCTTGATCAGTGGAGACCTGGTCAGCTGGGGCTTAGTGCTGGCCTGGTCATCATGGGCTGGGGCACTGGTGACCAGGTCAAGGGGTGCTATTCAGTGGAGGACTGGGCACATGGGACCTAGTCAGCAGACCCTGGTGGGCGTGTcctcatcagtgaggcccttgtcagtggggccctggtcagggcagccttgtcagcgggacctaatctgtagcgtcctggtcagag--gacttggtcagtgGTGACTTTTGTAGCACTGGTCTACAGGGTGACCTGGTCAGCGGGGATCTCAGCATTTGGTGCCAGTGCAGTGGGGTCTACTCACTAGGGTCCCAGTCAGGGGCATCTGGTGACCTTAGGCCTGGTTATTAGGGGCCTGATCAGTGGCAACCTGTTCCCTGGaggcctggtcagtggggcctcaaggttggggccagggaatgaggtcatgatcagtggaacctgatcagtgaggccttgtcaataatgacctagtcagtgaggacttgtcagtaaggacttggtccgtgaggccttgtcagtgaggccttgtcagtaaggtcctggtcagtggagtccttgtcattgTGTGCCTGGCAGTGGGggccttgttagtggggcctggtcatgagg i panTro4.chr4_GL389940_random N 0 C 0 a score=-1034.000000 s hg38.chr1_KI270707v1_random 751 1 + 32032 -t s panTro4.chr4_GL389940_random 20896 1 - 103824 -g i panTro4.chr4_GL389940_random C 0 C 0 s rhiRox1.KN298784v1 29488 1 + 95067 A- i rhiRox1.KN298784v1 N 0 N 0 a score=328188.000000 s hg38.chr1_KI270707v1_random 752 3605 + 32032 tctaatcagtgagggtttcatcagggaggacctgatgtgcggggtctggtcagcagggacctggtcaatgTGGGCTGCTGAGCACTGCTTGGATAAGCCAGGTGCAATGTGCATTATTGAAGGCCTTGTGGACAGCTGGGATAGCCCAGTGATGCCCAAGGGCCTAGTCAAAAGTGGACAAAGCACGTATTTGGATGGACCTGGGAGATCCTGCTCAGAGATCCTGACAGGACAAAGGTAAAGGAAGGGCCAGAGTGACTGGAGAGATGGTCACAGTCTATGGGCTGCACAGGATGGAGGAGGCCAGGGAAAAGGCAGGGTGGGCAGTTGGGGTTCAGGGAGAGGCAGGTGCATGCTGGGAGGTCAGACCCTGTGAAGGCTTTGGGGGCGTCAGGTTGGGTAGGCTCCAGGCACTCtcgctcacataggattccagaacactgctacaaggctctgagtgtttgtccctcacataggattccagaacactgctgccattgtctgaatgtttgtcccccacataggattccagaagcctgctgctggggtctgaatgtttgtcccccatctaggattccagaacactgctgcgagggtctgtatgtctttccctcacatatgattctagaacattgatgctagggtctgtatgtttgcccttaacatatgatttcaaaacactgctcctggattctgaatgtttgtccttcacataggaatacagaacactgttgctggagtctgaatggctgtcactcacatagaattccagaacactgctgtgaggatctgaaagtttgaccctcacatgggattccagaacactgctgcgagtgtctaaatgtctgtccctcacacaggattcccgaacaatgttacgaggttctgaatgtttgtccctaacataggattccagagcactcctgctgtgctctgaatgcttctccctcacataggattccagaacactgctatgagggtctgaatgcttatccctcatataggattccagaacacttctgctgtggtctgaatgtttgttcctcacataggattccagaatactcctgccatggtctgaatgtttgtccctcacataggattccagaacattcatgctggggtctcaatatttcccttaacataggatttcagaacactgctcttggggtctgaatgtttgtcgctcacataggattacagaacactgctgctggagtctgaatgtttgtcagtcacatagaattccagaacactgctacaagggtgtgaatatttctccctcacctagtattccagaacactgttgcaagggtctgaatgttggtccgtcatatatgattccagaacactgatgctttggtctgaatgtttgtccctcccatagaattccggaacactgctacaagggtctgaatgtttgtccttcacataccattccagaacactgctgccgtggtctgaatgtatgtccctcacataggattccagaacactgctactaggttctgaatgtttttcccacacctaggattccagaacacttttgctggtgtctgaatggttgttcctcacatatgattccaggacactgctacgagagtcttaatgtttgtccttcacattggattctagaacactgctcccgtggtctgaatgtttgtccttcacatagcattccagaacactgctgctggggtctgaatgtctgcccctcaaatcagattccagagcactgctgctggggtttgaatgtctttccctcacatagaattccagaacacggctgggagtgtctgaatgtttgt---------------ccagaacactgttgcgagggtctaaatgtctctccctcacataagatttcaggacactgctacgaggttctgaatg------------------------------------------------tttgtccctcacataggattccagaatactgccacgtgggtctgaatgtttgccctcacataggattccagaacactactgctggggtctgaatgtttgaccctcacataggattccagaacactcctgctgtggtctgaaagtttgttcatcacataggactccagaacactgctaagagggtatgaatgtccctcacatagtattccagaacactccttctgtggtctgaatgtttgttcctcacataggattcgagaacactcctgctgtggtctgaatgtttgtcccttacctaggattcgagaacattcacgctgggatgtaaatgcttgcccttaacataggatttcagaacactgctcctggggtctgaaagtttgtccctcacataggattccagaactctcctgctgtggtctgaaagtttgtaccgcacataggattccagaacactgctgctgtggtcggaatgtttttctgtcacataggattccagaacactgcggctgggttctgaatgtttgtccctcacataggatttcagaacgctgctacgagggtatgattgttggtccctcacataggattcctgaacactgctgctgggctctgaatgtttgtccctcacattggattgcagaacactactgctatggtctgaacgtttgtccgtcacataggattccagaacgctcctgctgtggtctgaatgtttgtctgtcacataggattccagaacactgcggctgggctctgaatgtccctgacataggattccagaacattgctatgagggtctgaatggttgcctttcccatagcattccagaacactgctgtgagggtctgaatgttggtccctcacacaggattccagaaccctccagctggggtctgaatgtttgtccctcacaaaggattccagaacactgctatgagggtctgaatatttgtccctcacataggattccagaacacacctgctgtggtctgaatggttgtccctcacaaaggattccagaacactcctgctgtgatctgaatggttgtccctcacataagattccggaacacttctgctgtggtacgaatgtttgtgtctcacgtaggattccagaacactgctacgagggtctcaatgtttgcccctcacataagattccagaacactgctgctggggtctgaatgcttgtccctcacatacgattacagaacactgttgctggggtgtgaatgtttgtccctcacaaaggattccagaacactgccatgagggtctgaatatttgtccctcacataggattccagaacacacctgctgtggtctgaatggttgtccctcacataggattccagaacactcctgctgtggtctgaatggttgtccctcacataagattccagaacacttctgctgtggtacgaatgtttgtgtctcatgtaggattccagaacactgctacgagggtctcaatgtttgtccctcacataagattccagaacactgctgctggggtctgaatgcttgtccctcacatatgattacagaacactgttgctggggagtgaatgtttgtccctcacataggataccagaccactgctgctgaggtctcaatgtctgtccctcaaaaaggattccagagcactgttacgagggtctgaatttttgtccctcacttaagactgcagaacactgcttcgagggtctaaatgtc s panTro4.chr4_GL389940_random 20897 3666 - 103824 tctaatcagtgagggtgtcatcagggaggacctgatgtgcggggtcttgtcagcagggacctggtcaatgTGGGCTGCTGAGCACTGCTTGGATAAGCCAGGTGCAATGTGCATTATTGAAGGCCCTGTGGACAGCTGGGATAGCCCAGTGATGCCCAAGGGCCTAGTCAAAAGTGGACAAAGCACGTGTTTGGATGGACCTGGGAGATCCTGCTCAGAGATTCTGACAGGACAAAGGTAAAGGAAGGGCCAGAGTGGCTGCAGAGATGGTCACAGTCTATGGGCTGCACAGGATGAAGGAGGCCAGGGAACAGGCAGGGTGGGCAGTTGGGGTTCAGGGAGAGGCAGGTGCATGCTGGGAGGTCAGACCCTGTGAGGGCTTTGGGGGCGTCAGGTTGGGTAGGCTCCAGGCACTCtcactcacataggattccagaacactgctacaaggctctgagtgtttgtccctcacgtaggattccagaacactgctgccattgtctgaatgtttgtcccccacataggattccagaagcctgctgctggggtctgaatgtttgtcctccatctaggattccagaacactgctgcgagggtctgaatgtgtgtccctcacatatgattctagaacattgatgctagggtctgtatgtttgcccttaacatatgatttcaaaacactgctcctggattctgaatgtttgtccttcacataggaatacagaacactgctgctggagtctgaatggttgtcactcacacagaattccagaacactgctgtgaggatctgaatgttcgaccctcacatgggattccagaacactgctgcgagggtctaaatgtctgt-cctcacataggtttccagcacaatgttacaaggttctgaatgtttgtccctaacttaggattccagagcactcctgctgtgctctgaatgcttctccctcacataggattccagaacactgctacgaggatctgaatgcttgtccctcatataggattccagaacacttctgctgtggtctgtatgtttgttcctcacataggattccagaatactcctgccatggtctgaatgtttgtccctcacataggattccagaacattcatgctggggtctcaatgtttcccttaacata-gatttcagaacactgctcttggggtctgaatgtttgtcgctcacatagaattacagaacactgctgctggagtctgaatgtttgtcagtcacatagaattccagaacactgctacaagggtgtgaatatttctccctcacctagtattccagaacactgttgcaagggtctgaatgttggtccgtcatataggattccagaacactgatgctgtggtctgaatgtttgtccctcacatagaattccggaacactgctacaagggtctgaatgtttgtccttcacataccattccagaacactgctgccgtggtctgaaagtatgtccctcacataggattccagaacactgctactaggttctgaatgtttttcccacacctaggattccagaacacttctgctggtgtctgaatggttgttcctcacgtatgattccaggacactgctacgagagtcttaatgtttgtccttcacataggattctagaacactgctcccgtggtctgaatgtttgtccttcacatagcattccagaacactgctgctggggtctgaatgtctgcccctcaaatcagatttcagagcactgctgctggggtttgaatgtctttccctcacatagaattccagaatatggctgggagggtctgaatgtttgtccctcacatgggataccagaacactgctgcgagggtctaaatgtctctccctcacataagatttcaggacactgctacgaggttctgaatgtttgtccctcacaaaggattccagagcactcctgctgtggtctgaatatttgtccctcacataggattccagaacactgccacgtgggtctgaatgtttgccctcacataggattccagaacactactgctggggtctgaatgtttgacactcacataggattccagaacactcctgctgtggtctgaaagtttgttcatcacataggactccacaacactgctaagagggtatgaatgtccctcacatagtattccagaacactccttctgtggtctgaatgtttgttcctcacataggattcgagaacactcctgctgtggtctgaatgtttgtcccttacctaggattcgagaacattcacgctgggatgtaaatgcttgcccttaacataggatttcagaacactgctcctggggtctgaaagtttgtccctcacataggattccacaactctcctgctgtggtctgaaagtttgtaccgcacataggattccagaacactgctgctgtggtcggaatgtttttctgtcacataggattccagaacactgcggctggtttctgaatgtttgtccctcacataggatttcagaacactgctacgagggtctgattgttggtccctcacataggattcctgaacactgctgctgggctctgaatgtttgtccctcacattggattgcagaacactactgctatggtctgaacgtttgtccgtcacataggattccagaacgctcctgctgtggtctgaatgtttgtctgtcacataggattccagaacactgcggctggggtctgaatgtccctgacataggattccagaacattgctatgagggtctgaatggttgtctttcacatagcattccagaacactgctacgagggtctgaatgttggtccctcacacaggattccagaaccctcctgctggggtctgaatgtttgtccctcacaaaggattccagaacactgctatgagggtctgaatatttgtccctcacataggattccagaacacacctgctgtggtctgaatggttgtccctcacaaaggattccagaacactcctgctgtgatctgaatggttgtccctcacataagattctggaacacttctgctgtggtacgaatgtttgtgtctcacgtaggattccagaacactgctacgacggactcaatgtttgtccctcacataagattccagaacactgctgctggggtctgaatgcttgtccctcacatacgattacagaacactgttgctggggtgtgaatgtttgtccctcacaaaggattccagaacactgctatgagggtctgaatatttgtccctcacataggattccagaacactcctgctgtggtctgaatggttgtccctcacataggattccagaacactcctgctgtggtctgaatggttgtccctcacataagattccagaacacttctgctgtggtacgaatgtttgtgtctcacgtaggattccagaacactgctaccagggtctcaatgtttgtccctcacataagattccagaacactgctgctggggtctgaatgcttgtccctcacatacgattacagaacactgttgctggggagtgaatgtttgtccctcacataggataccagaccactgctgctggggtctcaatgtctgtccctcaaaaaggattccagaacactgttacgagggtctgaatttttgtccctcacttaagactgcagaacactgcttcgagggtctaaatgtc i panTro4.chr4_GL389940_random C 0 I 715 a score=657025.000000 s hg38.chr1_KI270707v1_random 4357 7442 + 32032 tgtccttcacataggattccagaacactccttctggtgtctgaatgtttgtccctcacataggattccagagcactcctgctgtggactcaatgtttgttaatcacataggattccagaacactgctacaagggtctgaatgtttgtccctcacataggattccagaatactcctgctatggtcttaatgcttgtccctcacataggattccaaaacattcatgttggggtctgaatgtttgcccttatcataggatttcagaacagtgttcctggggtctgaatgtttgtccttcatataggatttaagaacacacctgcttttgtctgaaagtttgtccctcacataggattccagaactctcctgctgtggtctgaaagtttgtccttcacataggattccagaacactgctgctgtggtttgaatatttgtccctcacataagattccagaacactgctaggagggtctgaatgtttgtccctcacataggattcctgagcattgttgtcgtggtctgaatttttgccattcacataggattccagaacagtgctacgagtgtctgaatgtttgtccctcacataggattccagaacacttctgctggtatctgaatgtttgtacctcacataggattccagaacactgctgctggggtctgaacgtctgtccctcacataggattctagaacactgctgttggggtttgaatgtccctcacatagaattccagaacactgctgcgagtgtctgaatgtttgtcctgcagatgagattctagaacactgctgtgagggtctaaatgtctgtccctgacataacattccagcacactgctacgaggttttgaaatgtttgtccctcacataggattccagaacactcctgctgtggtctgaatgtttgcccctcacataggattccagaacattcctgctgtggtctgattgttcctcacataggattccagaacactgctacgaggttctgaatttttgtccctcacataggattgcagaacactgctacaagggtttgaaagtttttccctcacataggattccacaacactactgctggggtctgaatgtttgtccctcacataggattctggaacactccagctggcttctgagtgtttgtccctcacataggattcctgaagactgctgatgtcactatagtcgttgcgagtgtctgaatgtttgaccttcaccaaacactaaatatcctgcccttttagtcttggactttccagcctccagatctgtgagcaata-tctctgttgtttatgaattactcagtctaaagtattttgttatagtagcctaaagagactaagaGAgcatcacctgccctgtcacctcatcaccgcattactaaagctatactaacagcagtcaattttagtgggtgcttcatgcatgagaataaagggaaaaaattgcaaggcatactaaaatccaaaaaaagaaaaaaatataatttgtgtcaacagagcaagcttcagaagcagacaaagatatgattttggaattttttttaaacctctggagaatatgctaagggcctaatgaatgaagtagacagcattcaagtatagatgggtaatgtaatcagaaagacagacatcgtaagaaccttcaacataatgtagtggtaaaaaatgtggtaaataactgaagaatacctctgatggcttattagtagactggactcagctgagtaaagaatctctgagcttgaggatttatcatcagaaacttcgaaaactaaagaaaagaaacactgaaaataacagaagatgatatccaagactgtgggacaactacaaaaggtgaaacagagtaatgagaataccaggaggagaagaaatagaagaaagttctgcaacaaccatgtctgagaacttccagtattaatgtcagacaccaaaccaaagatccaggaagctccaagaacaccaggcagaataaatgccaacaacgtacacttggacatataattttcaaactatatgaaataaaagataaaggaaaactctgaaagaaaccagaggtggggcagaaaacaccttacctacagagacacaaagataagaactgcattcaacattgcagaaactgtgaaagcaagaagacagtgaaatgaaaaattcaaaatgttgacagaaaaaaacccaccaacctaagtttctgtacccactgaaaacacccttcaaaagtgaaggagaattaaggccttcctcagaaaaataaaaattcaagaaacttgttgccaggagacctgtcttgcaagaaatgttaaatgaaattctttagagggaaacaaaagatatataactgaaacctggatcaacatttttttaaaaagagcattaaagaattgtggtacaataaaaacctatgtatttattcttaattgatctgaccaagaagttcatagacaataacaaatacacacagatagattatgtatgcttaaacacaagtgaaatgagtaacactaatacaaggaatggaatggaaggatGGGAGGGAGGAATTGTggtacaataaaaacatgtatttattcataattgatctgaccaataagtttgtagataataataaatacacacagatagattatgtatgcttatacacaagtcaaataaggaacaataatacaaggaatggaatggaaggatgggagggaggaatcaggtgttttctttgttaagcaggtagtcacccgtgaagtgggatagtgttatctgaaagtggacttgaattggttgtaaatgtatattgaggaattaggtgtgttctttgttaagcaggtagtcttatttgtgggatagtgggatagtgttatttgaaagtggacttgaattggttgtaaatgtTACTgaggaattaggtgttttgtttgttaagcaggtagtcttatttgtgggatagtgggatagtgttatttgaaagtggacttgaatttgttgtaaatgtatatcgcaaattctgtggcaactagttaaaaaaagttttaaaaagagaagtacatgctaagaaagacagggaaaatgtagtcatctaaaatcatcaatgaaaactgcaaaaggcagaaaaagagtggtagacaaaagaatggagactgaggagaatgaatagaaaacagtaacaaatatagtagatattaatccaatgatatcaataatcactttgaatgctaatggtatgaatgtaccaattcaaagatagagattgtcagagtctatcaaaagacagacacatcttgattcactgcactttgctttattgtgttttgtgaccatgtgttttacatattgaaggtttgtggccaccctgcaatacgcaggtctgactggcaccattgtccctacagcacgtgctaacttcacgtctctgtgtcacatttcggtcattctcgcagtattttaagatttttattattgaatc-gttatggtgatctgtaatgagtggtctttaatgctactgttgtcattgttttgggaaccacaaatcacaccaggataagacagcaaacaattgacaaatgcgtttgttctgactgccccaccaacgggccatttctctttctctctctttttctcaggcttctttttattaatattaaaatgtggccaattaataaccctacaatagcctctgtatgttcaagtgaaagaagagttgtatgtctgtcactttaaaccaaaagaaagaaataattaagcttagtgaggaaggcatgctgtaagcaagacaggccagtagctagacctcatgcaacaaacacttagccaagttgtgaatgcaaaagaagtgttctggaaagaaatttaaagtactactccagtgaatacatgaatgataaaaagctaaacaatcttgctgctgttatgaagaaagtttaattgatctagatagaagataaaaaaaaa-----------ttccattaagcctaagcctaactctctttttacttttttctttgtttttgagacagagtttcatttttcttgcccaagctggagtacaatggcatgatcttggctcatcgcaacctctgcctcccaagttcaagc---tctcctgcctcagcatcccgagtagctgggattacaggcatgcaccaccacacctggctaattttttgtatttttagtagagacggggtttctccacgttggtcagactggtgtcgaactcccgacctcaggtgatctgcccgcctcggcctcccaaagtgctaggattgcaggtgtgacagccaccacacccggcctctcttcaattctatgaagacttagagaggtgaggcagctgcagaagaagagtctgaagctagaagagcttgtttcttgaggtttaaggaaaaaagtcatctccataacataaaagcgcaagataaagcagcaagtactgatggaaaagctgcagaaagctatctagaagataattgattaagacggctacactaaacagatttgcaatggagacaaaacagcattctactagaaggagatgccatccaggatgttcccagctagagaggagttgattcctggctttaaggcttcgaaggacatgctgactcttttgttaagacctaatgcagttggtgatgttaacatgaaaccaatgatgatttactattctgaaaatccgagggccctgaagaattatgataaaacacagctctgcctgtactctacaaatgggaacaaagcctggatgacagactatcggtttacaaatacggtttactgaatatcttaagcccactgtcgacaactactgctcaagaaataagattcctttcaaagtattaccactcactgacaatgccgctggtactcaagggcttttacagagatgtataaagagctgaatattgttttcatgcctactaacccaacattcattctggtgcccttggatcaaagaataatttcaactttcaagtcttatcacttaaaaaatatatttcataaagctatagcttctctagaaagtgattcctttgatggatctgggcaaaataattgaaaacctactggaaaggattcaccattctagatgccattgagaacattcatgatttaaaaaagaagatcaaaatagcaacattaggagaagttggggctgggcttggtggctcacgcctgtaatcccagcactttgggaggccaaggcacgcagatcatgaggtcaggaatttgagaccagcctggccaacatagtgaaatcctgtctatactataaacaaaaaaaaaaattagctgggcctggtcgggggtgactctaatcccaaacacttgggaggctgaggcaggagaattgcttgaacacgggaggtggaggttgcagtgagctgagatcgcatcactgcactccagcccaggcaagacttcatctcaaaaaaataaaagagagagagagaagttgggaagattattccaaccctcactgatgacagaggggttcaccacttctgtggaggaagtaactgcagatatggtggaaataacaagagcactagaatcagagacagagcctgaagatctggcgagactgcagcatcctctggagaaaacgtgagaggatgagttgcttgcacggatgagcaaagaaagtggtttcttcagatgaaatctactcgtggtgaagacagtgtaaacaatgttgagatgacaacagatttagaataaacttggtacagcagaaggaaggcttgacaggattgaacccaatgatttaaaataatacgtaaacttagttggtacagcagtacgaaggtttgacagcattgaatccaattttgaaagttctactgtgggtaaaaagctatcatcgtatgctacagataattcttttgtgaaagggagagtcaattgacacagcaaacttcaatattgtctttttttaagaaattgccacagccaccccaacgctcagcaaccaccaccttacattaaggtaagaccctccatcagcaagaagactgaaacttggccaggtgcagtggctcacacctgtcatcccaacaccttgggaggccaaggtgggtggatttcttgagcccaggaagtcgaggcaacatggcaaaaccccatctctacaaaaaaaaatacaaaaattagctgcacacggtggcatgcacctgtagtcccagctagtcaggagtctgaggtgggggtttgattgagcatgaggttgaggctgcaattactccagcctgagccacagagtaaaaccctgtcacgcacacaaaaaaagattgcagctttctgaaggctcagatgactgttagcacttgttaacaataaagtatttgtaaattaaagtgtgtatactttgtagacaaatgctattgcacactttatacagcacagtataaacatacttttacatgcactgggaaaccgaaagaaattgtataaaactttattgcagtggtctggaaccaaacccacatatatctctgatgcatggctgTCctgtattgtacacttaaaaaaa-tacttaagagggtatattttatgtgaaatggtcatctcatttttttt---gagacggagtcacactctgttgcccaggctggagtgcagtggtacgatctcggctcactgcaagctctgcctcccgagttcacaccattatcctgcctcagtctcccgagtagctgggactacaggtgcccgccatcaagcatggctaattttctgtatttttagtagaaacggggtttcactgtgttagccaggatggtcttgatctcctgacctcgtgatccacctgccttggcctcccaaattgctgggattacaggtatgagccgccactcccggtctcattttttaaaaagggtgagaatgagaaatatatggggagtgattgtcaagtttacggcattatttgttgtgatgagtcctggggcgaatacttatctctatactcattaagatgtatatattcggtgtcacacgcctgtaatcccagcactttgggaggccgaggcaggtggatcatctgcggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctactaaaaaaatacaaaaattagccaggcgtgggggcgcatgcctgtgatcccagctactgaggaggctgaggcaggagaattgcttgaacccgggaggcggaggttgcagttagctgagatcgtgtcactgcactccagcctggacaacaagagtaaaacctccgtAacacacacacaaacacacacacacacacacacacacacacacacacacacacggtatatattaaatatgtgtaatttttgtgtgtcaaccacaccttaGCtttattttattttatttttttgagacagagtcttgctctgtcacccaggctggagtccagtggcgcaatctcagctcactacaagctccacctcccag s panTro4.chr4_GL389940_random 25278 7378 - 103824 tgtccttcacataggattccagaacactccttctggggtctgaatgtttgtccctcacataggattccagagcactcctgctgtggtctcaatgtttgttaatcacatcagattccagaacactgctacaagggtctgaatgtttgtccctcacataggattccagaatactcctgctatggtcttaatgcttatccctcacataggattccagaacattcatgttggggtctgaatgtttgcccttatcataggatttcagaacagtgctcctgaggtctgaatgtttgtccttcatataggatttaagaacactcctgctttggtctgaaagtttgtccctcacataggattcccgagcactcctgctgtgttctgaa------------------------------------------------tgtttttccctcacataggattccagaacactgctacgagggtctgaatgtttgtcccttacataggattcctgagcattgtttccgtggtctgaatttttgccactcacataggattccagaacagtgctacgagggtctgaatgtttgtccctcacataggattccagaacacttctgctggtatctgaatgtttgtacctcacataggatcccagaacactgctgctgaggtctgaacgtctgtccctcacataggattctagaacactgctgttggggtttgaatgtgcctcacttacaattccagaacactgctgcgagtgtctgaatgtttgtcctgcagatgggattctagaacactgctgcgagggtctaaatgtctgtccctgacataacattccagcacactgctacgaggttttgaaatgtttgtccctcacataggattccagaacactcctgctgtggtctgaatgtttgcccctcacataggattccagaacattcctgctgtggtctgattgttcctcacataggattccagaacactgctacgaggttctgaatttttgtccctcacataggattgcagaacactgctacaagggtttgaaagttttcccctcacataggattccacaacactactgctggggtctgaatgtttgtccctcacataggattcccgagcactcctgctgtggtctgaatgtttttccctcacataggattcctgaagactgctgcTGTCACTATAGTCGTTGCGAGTGTCTGAATGGTTgaccttcaccaaacactaaatatcctgcccctttagtcttggactttccagcctccagatctgtgagcaataatctctgttgtttatgaattactcattctaaagtattttgttatagtagcctaaagagactaagaGAgcatcacctgtcctgtcacctcatcaccgcattactaaagctatactaacagcagtcacctttagtgggtgcttcatgcatgagaataaagggaaaaaaatgcaaggcatactaaaatccaaaaaaagaaaaaaatacaatttgtgtcaacagagcaagcttcagaagcagacaaagatatgattttggaattttttttaaacctctggagaatatgctaagggcctaatgaatgaagtagacagcattcaagtgtagatgggtaatgtaatcagaaagacagacatcgtaagaaccttcaacataatgtagtggtaaaaaatgtggtaaataactgaagaatacctccgatgccttattagtagactggactctgctgagtaaagaatctctgagcttgaggatttatcatcagaaacttcgaagactacagaaaagaaacactgaaaagaacagaagatgatatccaagactgtgggacaactacaaaaggtgaaacagagtaatgagaataccaggaggagaagaaatagaagaaagttctgcaacaaccatgtctgagaacttccagtattaatgtcagacaccaaaccaaagatccaggaagctccgagaacaccaggcagaataaatgccaacaacctacacttggacatataattttcaaactatatgaaataaaagataaaggaaaactctgaaagaaaccagaggtggggcagaaaacaccttacctacagagacacaaagataagaactgcattcaacattgcagaaactgtgaaagcaagaagacagtgaaatgaaaaattcaaaatgttgacagaaaaaaaaccaccaaccttagtttctgtacccactgaaaacacccttcaaaagtgaaggagaattaaggccttcctcagaaaaataaaaattcaagaaacttgttgccaggagacctgtcttgcaagaaatgttaaatgaaattctttagagggaaacaaaagatatataactgaaacctggatcaacatttttttaaaaagagcattaaagaattgtggtacaataaaaacctatgtatttattcttaattgatctgaccaagaagttcatagacaataagaaatacacacagatagattatgtatgcttatacacaagttaaatgagtaacactaatacaaggaatggaatggaaggatgggagggaggaattgtggtacaataaaaacatgtatttattcataattgatctgaccaataagtttgtatataataataaatacacacagatagattatgtatgcttatacacaagtgaaataaggaataataatacaaggaatggaatggaaggatgggagggaggaatcaggtgttttctttgttaagcaggtagtcaaccgtgaagtgggatagtgttatctgaaagtggacttgaattggttgtaaatgtatattgaggaattaggtgtgttctttgttaagcaggtagtcttatttgtgggatagtgggatagcgttatttgaaagtggacttgaatttgttgtaaatgtTACTgaggaattaggtgttttatttgttaagcaggtagtcttatttgtggaatagtgggatagtgttatttgaaagtggacttgaattggttgtaaatgtatattgcaaattctgtggcaactagttaaaaaaagttttaaaaagagaagtacatgctaagaaagacagggaaaatgtagtcatctaaaatcatcaatgaaaaatgcaaaaggcagaaaaagagtggtagacaaaagaatggagactgaggagaatgaatagaaaacagtaacaaatatagtagatattaatccaatgatatcaataatcactttgaatgctaatggtatgaatgtaccaattcaaatatagagattgtcagagtctatcaaaagacagacacatcttgtttcactgcactttgctttattgtgttttgtgaccatgtgttttacatattgaaggtttgtggccaccctgcaataagcaggtctcactggcaccattgttcctacagcacgtgctcacttcacgtctctgtgtcacatttcggtcattctcacagtattttaagctttttattattgaatctgttatagtgatctgtaatcagtgatctttaatgctactgttgtcattgttttaggaaccacaaatcacaccaggataagacagcaaacaattgacaaatgcgtttgttctgactgccccaccaatgggccatttctctttctctctctttttctcaggcttctctttattaatattaaaatgtggccaattaataaccctacaatagcctctatatgttcaagtgaaagaagagttgtatgtctgtcactttaaaccaaaaggaagaaataattaagcttagtgaggaaggcatgctgtaagcaagacaggccagtagctagacctcatgcaacaaacacttagccaagttgtgaatgcaaaggaagtgtcctggaaagaaatttaaagtactactccagtgaacacatgaatgataaaaagctaaacaatcttgctgctgttacgaagaaagtttaattggtctagatagaagataaaaaaaaaaaacaaaaaaagtccattaagcctaagcctaactctctttttactttttt---tctttttgagacagagtttcattcttcttgcccaagctggagtacaatggcgtgatcttggctcatcgcaacctctgcctcccaagttcaagccattctcctgcctcagcatcccgagtagctgggattacaggcatgcaccaccacgcctggctaattttttgtatttttagtagagacggggtttctccacgttggtcagacaggtgtcgaactcccgacctcaggtgatctgcccgcctcggcctcccaaagtgctaggattacaggtgtgacagccaccgcacccggcctcccttcaattctatgaagacttagagaggtgaggcagctgcagaagaaaagtctgaagctagaagagcttgtttcttgaggtttaaggaaaaaagtcatctccataacttaaaagcgcaagataaagcagcaagtactgatggaaaagctgcggaaagctatctagaagttaattgattaagatggctacactaaacagatttgcaatggagacaaaacagccttctactagaaggagatgccatccaggatgttcccagctagagaggagttgatgcctggatttaaggcttcaaagaacatgctgactcttttgttaaggcctaatgcagttggtgatgttaacttgaaaccaatgatgatttactattctgaaaatccaagggccctgaagaattatgaaaaaacacagctctgcctgtaccctacaaatgggaacaaagcctggatgacagactatcagtttacaaatatggtttactgaatatcttaagcccactgtcgacaactactgctcaagaaataagattcctttcaaagtattaccactcactgacaatgccgctggtagtcaagggcttttacagagatgtataaagagctgaatattgttttcatgcctactaacccaacattcattctggtgcccttggatcaaataataatttcaactttcaagtcttatcacttaaaaaatatatttcataaagctatagcttctctagaaagtgattcctttgatggatctggacaaaataattgaaaacctactggaaacgattcaccattctagatgccattgagagcattcatgatttaaaaaagaagatcaaaatagcaacattaggagaagttggggctgggcttggtggctcacgcctgtaatcccagcactttgggaggcaaaggcacgtggatcatgaggtcaggaatttgagaccagcttggccaacatagtgaaatcctgtctatactataaacacaaaaaaaa-ttagctgggcctggtcgggggtgactgtaatcccaaacacttgggaggctgaggcaggagaattgcttgaacacgggaggtggaggttgcagtgagctgagatcacatcactgcactccagcccaggcaagacttcatctcaaaaaaataaaagagagagagagaagttgggaagattattccaaccctcactgatgacacaggggttcacgacttctgtggaggaagtaactgcagatatggtggaaataggaagagcactagaatcagagacagagcctgaagatctggtgagactgcagcagcctctggagaaaacgtgagaggatgagttgcttccacggatgagcaaagaaagtggtttcttgagatgaaatctactcgtggtgaagacagtgtaaacaatgttgagatgacaacagatttagaataaacttggtacagcagaaggaaggcttgataggattgaacccagtgatttacaataatacataaacttagttggtacagcagtatgaaggtttgacagcattgaatccaattttgaaagttctactgtgggtaaaaagctatcatcgtatgctacagataattcttttgtgaaagggagagtcaattgacacagcaaacttcaatgttgtcttattttaagaaattgccacagccaccccaacgctcagcagccaccaccttacattaaggtaagaccctccatcagcaagaagactgaaacttggccaggtgtagtggctcacacctgtcatcccaacaccttgggaggccaaggtgggtggattgcttgagcccaggacatcaaggcaacatggcaaaaccccatctctacaaaaaaaa-tacaaaaattagctggacacagtggcatgcacctgtagttccagctagtcaggagtctgaggtgagggtttgattgagcatgaggttgaggctgcaattactccagcctgagccacagagtaaaaccctgtcacacacacaaaaaaagattgcagccttctgaaggctcagatgactgttagcacttgttaacaataaagtatttgtaaattaaagtgtgcatactttgtagacatatgctattgcacactttatacagcacagtataaacatacttttacatgcactgggaaaccaaaagaaattgtataaaactttattgcagtggtctggaaccaaacccacatatatctctgatgcatgGCCGTCctgtattgtacacttaaaaaaaatacttaagagggtatattttatgtgaaatggtcatctcatttttttttttgagacggagtcacactctgttgcccagggtggagtgcagtggcacaatctcggctcactgcaagctcttcctcctgagttcacaccattatcatgccttagtctcccgagtagctgggactacaggtgcctgccatcacgcctggttaattttctgtatttttagtagaaacggggtttcactgtgttagccaggatggtcttgatctcctgacctcgtgatccacctgccttggcctcccaaagtgctgggattacaggcatgagccgccactcccggtctcattttttaaaaagggtgagaatgagaaatatatggggagtgattgtgaagtttacggcattatttgttgtgatgagtcctggggcgaatatttatctctatactcattaagatgtatatatttggtgtcacacgcctgtaatcccagcactttgggaggccgaggcaggtggatcatctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctactaaaaaaatacaaaaattagccaggcgtgggggcgcacgcctgtgatcccagctactcaggaggctgaggcaggagaattgcttgaacctgggaggcggaggttgcagttagctgagatcgtgtcactgcactccagcctgggcaacaagagtaaaacctccgtAacacacacaca--------------------------cacacacacacacaaggtatatattaaatatgtgtaatttttgtgtgtcaaccacaccttaGCtttattttatttt-----tttgagacagagtctcgctctgtcacccaggctggagtccagtggcgtaatctcggctcactgcaagccccacctcccag i panTro4.chr4_GL389940_random I 715 C 0 a score=18862.000000 s hg38.chr1_KI270707v1_random 11799 79 + 32032 gttcacaccattctcctgcctcaacttccggagtagctggaactacaggcacccgccaccacgcctggctaattttttg s panTro4.chr4_GL389940_random 32656 79 - 103824 gttaacaccattctcctgcctcaagctccggagtagctggaactacaggcactcgccaccacgcccggctaattttttg i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42318272 78 + 202140232 gttcacaccattctcctgcctcagcctcc-tagtagctggaactacaggcacctgccaccatgcccggctaattttttg i ponAbe2.chr3 N 0 C 0 a score=61341.000000 s hg38.chr1_KI270707v1_random 11878 123 + 32032 tatttttagtagagatggcgtttcactgtgttagcccggatggtttcgatctcctgacgtgatctgcctgcctcagcttcccaaagtgctgctattacaggtgtgagccaccgcgcccagACA s panTro4.chr4_GL389940_random 32735 123 - 103824 tatttttagtagagatggcgtttcacagtgttagcccggatgatctcgatctcctgacgtgatctgcctgccttagcttcccaaagtgctgcgattacaggtgtgagccacggcgcccagACA i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42318350 123 + 202140232 tatttttagtagagacggcgtttcactgtgttagcccggatggtctcaatctcctcacatgatctgcctgcctcagcctcccaaagtgctgctattacaggtgtgagccactgtgcccagGCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr24 1213986 123 + 28733288 tatttttagtagagacggcgtttcaccatgttagcccggatggtctcgatatcctgacatgatctgcctgcctcagcctcccaaagtgctgggattacaggtgtgagccaccacgcccagGCA i nomLeu3.chr24 N 0 C 0 a score=239571.000000 s hg38.chr1_KI270707v1_random 12001 302 + 32032 Atttttatttttttgagacagagcct---cactctgtcacccaggctggagtgcagtggcactatcttggctcactgcaacctctgcttcccatgttcaagcaattctcctgcctcagtctcccgagtagctgggaatacagatgcatgctatcacgcctggctaattttttc-atttttaatagagatgaggtttcaccatgttggccaagctggtctcaaactcctgacctcatgtgatctgcccacctcagcctcccaaagtgctgggattacaggtgtaagccactgcacccggcAATTTTT s panTro4.chr4_GL389940_random 32858 302 - 103824 Atttttatttttttgagacagatcct---cactctgtcacccaggctggagtgcagtggcactatcttggctcactgcaacctctgcctcccatgttcaagcaattctcctgcctcagtctcccgagtagctgggaatacagatgcatgctatcacgcctggctaattttttg-atttttaatagagatgaggtttcaccatgttggccaggctggtctcaaactcctgacctcatgtgatctgcccacctcagcctcccaaagtgctgggattacaggtgtaagctactgcacccggcaattttt i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42318473 302 + 202140232 Atttttatttttttgagacagagtct---cactctgtcacccaggctgcagtgcagtggcactatcttggctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcaggctcccgagtagctgggactacagatgcatgctatcacacctggctaattttttg-atttttaatagaaatgaggtttcaccatgttggccaggctggtctcaaactcctgacctcatgtgatctgcccacctcagcatctcaaaatgctgggattacaggcataagccactgcacccagcaattttt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr24 1214109 299 + 28733288 Atttttatttttttgacacagagtct---cactctgtcacccaggctggagtgcagtggaactatcttggctcactgcaacctctgcctcccaggttcaagcaatt---ctgccttaggctcccaagtagctgggactatagatgcatgctatcacacctggctaattttttg-atttttaatagagatggggtttcaccatgttgaccaggctggtctcaaactcctgacctcatgtgatctgcccaactcagcctcccaaagtgctgggattacaggcgtaagccactgcacctggcAATTGTT i nomLeu3.chr24 C 0 C 0 s calJac3.chr7 35345827 306 + 155834243 atttttacttttttgagacagagtctcaccactctgtcaccaaggccagagcgccgtggcactatctttgctcactgcaacctcttccctctaggttcaagtgagtttcctgcctcagtctcttaagtagctgggactacggacgcatgccaccacacctggctagttttttgtctttttagtagagacagggtttcaccatgttggccaggctggtctcaaactcctgaagtcatatgatctgcccatcttggcctcccaaagtgctgggattacaggcatgagccaccgcagccagcaattttt i calJac3.chr7 N 0 C 0 a score=1216.000000 s hg38.chr1_KI270707v1_random 12303 5 + 32032 TAATA--- s panTro4.chr4_GL389940_random 33160 5 - 103824 aaata--- i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42318775 5 + 202140232 aaata--- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr24 1214408 5 + 28733288 AAATA--- i nomLeu3.chr24 C 0 C 0 s calJac3.chr7 35346133 5 + 155834243 aagta--- i calJac3.chr7 C 0 C 0 s tarSyr2.KE941085v1 90341 5 - 1133132 ---TAGAA i tarSyr2.KE941085v1 N 0 N 0 a score=509299.000000 s hg38.chr1_KI270707v1_random 12308 673 + 32032 CATATAATTAAAAATTAATAAAAAACAGGTATTTGCAAGTTTCTGTTTTGTTATATGCTTATTATTCTTTATCTTTATGTCAGGTTGCTGTGTCAATACACTTAGGAGATCATAGTTTCTGAATTGAAATACAAATAAATATGTCTGAAAtttt-ttcttttttc--tttttttttgagacggactctcattctgtcacccaggctggagtgcagtggtgcaatcacagttcactgcaaactccgcctcccagattcaagtgattctcctgcctcagcctccagagtagctgggattacaggcacccgccatgacaagcagctaacttttatatattttttt-ctatttttagtaaa---agggtttcaccatgttggccagggtggtctccaactcctgacctcagatgatcctcccgcctcagcctcctcaagtgctgggattacaggtgtgagccactgtgcctggccTGGAATTTTTTTCTAAAATTTACATTTCTGAGTTAAGAATGCTTAAAATATTATAAAAACAGAAGCACAATTCATTATGTGTTTCATTAATTACCTTTATTAAAAACAACacaattatattacaataggacaaaaaa--tgtttaagcaaatgaaaacgaaaccatgacatacccaaactcaggaggaggcaacaaaggcagtgctaaagg s panTro4.chr4_GL389940_random 33165 677 - 103824 tatataattaaaaattaataaaaaaCAGGTATTTGCAAGTTTCTGTTTTGTTATATGCTTATTATTCTTTATCTTTATGTCAGGTTGCTGTGTCAATACACTTAGAAGATCATAGTTTCTAAATTGAAATACAAATAAATATGTCTGAAAtttt-ttcttttttc--ttttttttcgagatggattctcattctgtcacccaggctggagtgcagtggtgcaatctcagctcactgcaacctctgcctcccagattcaagtgattctcctgcctcagccttcagcgtagctgggattacaggcacctgccatgacacgcagctaacttttatattttttttttctatttttagtaaagacagggtttcaccatgttggtcagggtggtctccaactcctgacctcagatgatcctcccgcctcagcctcctcaagtgctgggattacaggtgtgagccactgtgcctggccTGGAATTTTTTTCTAAAATTTACATTTCTGAGTTAAGAATGCTTAAAATATTATAAAAACAGAAGCACAATTCATTATGTGTTTCATTAATTACCTTTATTAAAAACAACacaattatattacaataggacaaaaaa--tgtttaagcaaatgaaaacgaaaccatgacatacccaaactcaggaggaggcaacaaaggcagtgctaaagg i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42318780 667 + 202140232 tatataattaaaaattaataaaaaaCAGGTATTTGCAAGTTTCCGTTTTGGTATATGTTTATTATTCTTTATCTTTATGTCAGGTTGCTGTGTCAATACACTTAGGAGATCATAGTTTCTAAATTGAAATACATATAAATGTGTCTGAAATGtt-ttcttttttc-ttttttttttgagatggagtctca--ctgtcgcccaggctggagtgcagtagtgcaatctcagctcactgcaaactctgcctcccagattcaagtgattctcctgcctcagcctccagagtagctgggattacaggcacccgccaccacacccag----cttttatattttttttt-ctatttttagtaaagacagggtttcaccatgttggccagactggtctccaactcctgacctcagatgatctgcctacctcagcctcccaaagtgctgggattacaggtgtgaaccactgtgcctggccTGGAATTTTTTTCTAAAGTTTACATTTCTGAGTTAAGAATGCTTAAAATATTATAAAAAGAGAAGCACGATCCATTATGTGTTTCATTAATCATCTTTATTAAAAACAATGCAATTATattacaataggacaaaaaa------taagcaaatgaaaacaaaaccatgacatacccaaactcagaaggaggcaacaaaggcagtgctaaagg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr24 1214413 672 + 28733288 TAGGTAATTAAAAATTAATAAAAAACAGGTATTTGCAAGTTTCTGTTTTGGTATATGTTTATTAT------TCTTTATGTCAGGTTGCTGTGTTAATACACTTAGGAGATCATAGTTTCTAAATTGAAATACATATAAATATGTCTGAAATGtt-ttcttttttctttttttttttgagacagagtcttactctgtcacccaggctggagtgcagtggtgcaatctcagctcactgcaacctccgcctcccagattgaagtgattctcctgcctaagcctccagagtagctgggattacaggcgcctgccaccacaccaagctaacttttaaaaattttttttccatttttagtaaagacagcgtttcaccatgttagcaaggctggtctccaactcctgacctcaggtgatctgcccgcctcggcctcccaaagtgctgggattacaggtgtgagccactgtgcctggACTGGAA--TTTTTCTAAAGTTTACATTTCTGAGTTAAGAATGCTTAAAATATTATAAAAACAGAAGCACAATTCATTATGTGTTTCATTAATCACCTTTATTAAAAATAATACAATTATattacaataggacaaaaaa-atgtttaagcaaatgaaaacaaaaccatgacatacccaaactcaggaggaggcaacaaacatggtgataaagg i nomLeu3.chr24 C 0 C 0 s calJac3.chr7 35346138 642 + 155834243 tatgtaataaaaaattaataaaaaCCAGATATTTGCAAGTTTCTGATTTGGTATATGTTTATTAT------TCTTTATGTCAGGTTGCTGTGTCAATACACT-------------TTTCTAAATTGAAATACATATAAATATGTCTGAAAttttgttcttttttc----------tgagacaaagtctcactctgtcacccaggctggagtgcagtggtacaatctcagctcactgcaacctccgcctcccaggttcaattgattctcctgcctcaggctccagagtagctgggattacaggtacccaccaccacacccatataacttttgtatttttttgt---atttttagtaaagacaggatt--------ttggtcaggctggtctcaaactcctgacctcaggtgatccacccatctcagcctcccaaagtgctgggattacaggtgtgagccactgctcctggcATGGAATATTTTTCTAAAGTTTACATTTCTGAGTTAAAAATGCTTAAAATATTATAAAAAACAAAGCACAATTCATTATGTGTTTCATTAATCACCTTTGTTAAAAACAATGCAATTATattacaggaagacaaaaaaaatgtttaagcaaatgaaaacaaaaccatgacatacccaaactcacagggaggcaacaaaagcagtgctaaagg i calJac3.chr7 C 0 C 0 a score=-138.000000 s hg38.chr1_KI270707v1_random 12981 1 + 32032 c s panTro4.chr4_GL389940_random 33842 1 - 103824 g i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42319447 1 + 202140232 g i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr24 1215085 1 + 28733288 g i nomLeu3.chr24 C 0 C 0 s calJac3.chr7 35346780 1 + 155834243 g i calJac3.chr7 C 0 C 0 s micMur1.scaffold_5252 23839 1 + 100118 a i micMur1.scaffold_5252 N 0 N 0 a score=41262.000000 s hg38.chr1_KI270707v1_random 12982 50 + 32032 aagcttacagctgcagatgcttaaactaaaaagaagaaagatctcaaacc s panTro4.chr4_GL389940_random 33843 50 - 103824 aagcttacagctgcagatgcttaaattaaaaagaagaaagatctcaaacc i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42319448 50 + 202140232 aggcttacagctgcagatgcttaaattaaaaagaagaaagatctcaaacc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr24 1215086 50 + 28733288 aagcttacaggtgcagatgctcaaattaaaaagaagaaagatctcaaacc i nomLeu3.chr24 C 0 C 0 s calJac3.chr7 35346781 50 + 155834243 aaacttacagctgtaggtgcttaaattaaaaagaagaacaatctcaaatc i calJac3.chr7 C 0 I 2550 a score=1146.000000 s hg38.chr1_KI270707v1_random 13032 2 + 32032 ca s panTro4.chr4_GL389940_random 33893 2 - 103824 ca i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42319498 2 + 202140232 ca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr24 1215136 2 + 28733288 ca i nomLeu3.chr24 C 0 C 0 e calJac3.chr7 35346831 2550 + 155834243 I a score=15610.000000 s hg38.chr1_KI270707v1_random 13034 124 + 32032 tgctaaagggaagcttacagctgcagatccttaaattaaaaagaagaaagatctcaaacccgtgctaaagggaagcttacagctgcagatgcttaaattaaaaagaagaaagatctcaTACCCT s panTro4.chr4_GL389940_random 33895 62 - 103824 tgttaaagggaagcttacagctgcagatgcttaaattaaaaagaagaaagatctcaaaccC--------------------------------------------------------------T i panTro4.chr4_GL389940_random C 0 C 0 s nomLeu3.chr24 1215138 123 + 28733288 tgctaaagggaagcttatagctgcagatgcttaagttaaaaagaagaaagatctcaaactcatgctaaa-ggaagcttacagctgcagatgctcaaattaaaaagaagaaagatctcaaaccca i nomLeu3.chr24 C 0 C 0 e calJac3.chr7 35346831 2550 + 155834243 I e ponAbe2.chr3 42319500 0 + 202140232 C a score=372705.000000 s hg38.chr1_KI270707v1_random 13158 763 + 32032 TGCtaaag--------------------------------------------------------ggaagcttatagctgcaggtgcttaaattaaaaagaagatagatctcaaatcaataacctaatattacacctgaaggaggaaaaaaaaaactaatgacaaaccaagcaaaaggaagaaaataacagattagagcagagataagcagaataagaccagaaaaaaa---ggaaaaaaaaacagtgagtttgtttttttaaagatcaataaaaattttaaaatttttattttaagctatattaagaaaaaaagagaaatctcaaatactaaaatcataaataaaagagttgacagtacaacagatgccacagaaatgaaaaagattacaagacactaatgtgagcaaccatatgccacaaaactgggcaacctagaataaatttataaattcctagaaacacaaaccaccatactgcatcacggagaaataaaaaatccaaagagacctgtaactagtatgaagattcaaccagtaatcaaaaaccccaccaaaatgaaaattccaggtccagataactttactggaaaattttaccaaacatttcaagaagaattaatgccaatcctctgcaaaatcttccaaaaatgttcaaaaaccagaaggggacattccaatccattctatcaggtcaacatttatctgattccagagccagatgaacaccttttgtaataaaaacactcaaagaattagtaatatatggaatctcctcagtaaataaagattatacatgaaaagctcacagctaacatcatactc s panTro4.chr4_GL389940_random 33957 754 - 103824 tgctaaag--------------------------------------------------------ggaagcttatagctgcaggtgcttaaattaaaaagaagaaagatctcaaatcaataacctaacattacacctgaaggaggaaaaaaaaa-ctaatgacataccaagcaaaaggaagaaaataacagattagagcagagataagcagaataagaccagaaaaaaa---ggaaaaaaaa-cactgagtttgtttttttaaagatcaataaaaattttaaaactcaca------gctatattaagaaaaaa-gagaaatctcaaataataaaatcataaataaaagaggtgacagtacaacagatgccacagaaatgaaaaagattacaagagactaatgtgagcaagcatatgccacaaaactgggcaacctagaataaatttataaattcctagaaacacaaaccactatactgcatcacggagaaataaaaaatccaaagagacctgtaactagtaagaagattcaaccagtaatcaaaaaccccaccaaaaagaaaattccaggtccagataacttcactggagaattttaccaaacatttcaagaagaattaatgccaatcctctgcaaaatcttccaaaaatgttcagaaaccagaaggggacattccaatccattctatcaggtcaacatttatctggttccagagcctgatgaacaccttttgtaataaaaacactcaaagaattagtaacatatggaatctcctcagtaaataaagattatacatgaaaagctcacagctaacatcatactc i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42319500 754 + 202140232 tgctaaag--------------------------------------------------------ggaagcttatagctgcaggtgcttaaattaaaaagaagaaagatctcaaatcaataatctaacattacacctgaag--ggaaaaaaaaaactaatgacaaaccaagcaaaaggaagaaaataacagattagagcagagataagcagaataagaccagaaaaaaaaaggaaaaagaaaacactgaggttgtttttttaaagatcaataaaaattttaaaactcaca------gctatatttagaaaa---gagaaatctcaaatactaaaatcataaataaaagaggtgacagtacaacagatgccacagaaatgaaaaagattacaagagactaatgtgagcaaccatatgccacaaaactgcgcaacctaaaataaatttataaattcctagaaacacaaaccaccatactgcatcatggagaaataaaaaatccaaagagacctgtaactagtaagaagattcaaccagtaatc-aaaaccccccaaaaaagaaaattccaggtccacataacttcactggagaattttaccaaatatttcaagaagaattaatgccaatcctctgcaaaatattccaaaaatgttcaaaaaacaggaggggacattccaatccattctatcaggtcaacatttatctggttccagagccagatgaaCtcctttcataataaaaacactcaaagaattagtaatagatggaaactcctcagtaaataaagatcgtacatggaaagttcacagctaacatcacactc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr24 1215261 811 + 28733288 tgctaaagggaagcttacagctgcagatacttaaaaagaagaaagatctcaaacccatgctaaaggaagcttacagctgcaggtgcttaaattaaaaagaaagaagatctcaaatcaataacctaacattacacttgaag--ggaaaaaaaa--ctaatgacaaaccaagcaaaaggaagaaaataacagattagagcagagataagcagtataagaccaggaaaaaaaggaaaaaaaaaaccactgagtttgtttttttaaagatcaataaaaattttaaaactcaca------gctatattaagaaaaaa-gagaaatttcaaatactaaaatcataaataaaagaagtgacagtaaaacagatgccacagaaatgaaaaagattacaagagactaatgtgagcaaccatatgccacaaaactgggcaacctagaataaatttataaattcctagaaacacaaaccaccatattgcatcacggagaaataaaaaatccaaagagacctgtaactagtaagaagattcaaccaataatcaaaaaccccccaaaaaagaaaattccaggtccagataacttcactggagaattttaccaaacatttcaagaagaattaatgccagtcctctgcaaaatattccaaaaatgttcaaaaaacaggagggaacattccaatccattctatcaggtcaacatttatctggttccagagccagatgaacacctttcataataaaaacactcaaagaattagtaatagatggaaactcctcagtaaataaagatcgtacatgaaaagttcacagctaacatcatactc i nomLeu3.chr24 C 0 I 332 e calJac3.chr7 35346831 2550 + 155834243 I a score=409415.000000 s hg38.chr1_KI270707v1_random 13921 823 + 32032 aatggtgaaaaactaaaatcttttcctctaggatcaggaataagatagcaacttctcttcctgccacttctattcaccacagcactggaatttctacttagaataattaggcaagagaaattaataaaaagcatgcaaattggaaaggaaaaagtacaaaattt-gttcacagacaacatgatgtaatgtgtaaaaattctgaaattccacaaaatactggtagaataatgaaattcaac-aaagtttcaggatatagtaacacactcaagtcagttgcattcctctaaactaacaatgaacaatctgcaaataaaattttaaaa--agaggccaggtgcagtggctcacagttgtaatcccagcactttgggaggccaaggcgggtggaccacctgaggtcaggagttcgtgaccagctgggccaaccccatctctaatataaatagtaaaactctatctctattaaaaatacaaaaattagctgggcatagtggcagacacctgtagtcccagctacttgggagtctgaggcaggagaattgcttgaacttgggaattggaggttgcagtcagctgagattgtgccactgtgctgcagcttaggaaacagagtgagacgcggtctcaaaaaaaaagaaagaaaggaaagaaagagagagaaagaaaaga---------aaagaaagagaaaac-----aaaagaaatttttaaaaagaatgacatttggccgggtgcggtggttcatgctagcaatcccagcagttt-gggaggccaaggcgggcagatcacctgaggtcacaagttcaagactagcctggtcaacatggagaaaccctg s panTro4.chr4_GL389940_random 34711 823 - 103824 aatggtgaaaaactaaaatattttcctctaggatcaggaataagatagcaacttctcttcctgccacttctattcaccacagcactggaatttctacttagaataattaggcaagagaaagtaataaaaagcatgcaaattggaaaggaaaaagtacaaaattttgttcacagacaacaggatgtaatgtgtaaaaattctgaaattccacaaaatactggtagaataatgaaattcaac-aaagtttcaggatatagtaacacactcaagtcagtttcatttctataaactaacaatgaacaatctgcaaataaaattttaaaa--agaggccatgtgcagtggctcacagttttaatcccagcactttgggaggccaaggcgggtggaccacctgaggtcaggagttcgtgaccagctgggccaaccccatctctaatataaatagtaaaactctatctctattaaaaatacaaaaattagctgggcatggtggcagacacctgtagtcccagctacttgggaggctgaggcaggagaattgcttgaacttggaagttggaggttgcagtcagctgagattgtgccactgtgctccagcttaggaaacagagtgagacgcagtctcaaaaaaaa-gaaagaaaggaaagaaagagagagaaggaaaaga---------aaagaaagagaaaac-----aaaagaaatttttaaaaagaatgacatttggccgggtgcggtggttcatgccagcaatcccagcaggtt-gggaggccgaggcgggcagatcacctgaggtcacaagttcaagactagcctggtcaacatggagaaaccctg i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42320254 837 + 202140232 aatggtgaaaaactaaaagcttttcctctaggatcaggaacaagataccaaaatctcctcctgccacttctattcaccacagtactggaatttctactaagaataattaggcaagagaaataaataaaaagcatgcaaattggaaaggaagaagtacaaaattttgttcacagacaacaggatgtaatgtgtaaaaatcctgaaattccacaaaatactggtagaataatgaaattcaacaaaagtttcaggatacagtaacacacacaagtcagttgcatttctataaactaacaataaacaatctgcaaataaaattttaaaaagagaggccaggtgcggcggctcacgcttgtaatcccagcactttgggaggccaaggtgggtggatcaccagaggtcaggagttcatgaccagctgggccaatcccatctctaatataaatagtaaaactctgtctctattaaaaatacaaaaattagctgggcatactggcaaacacctgtagtcccagctacctgggagactgaggcaggagaattgcttgaacttggaaggtggaggttgcagtcagctgagattgtgccactgtgctccagcctaggaaagagagtgagatgctgtctcaaaaaaaaaggaagaaaggaaagaaagagagagaaagaaaata-----aaacaaagaaaaagaaaacaaaagaaaagaaatttttagaaagaattacatttggccaggcatggtggctcatgcctgcaatcccagcactttgggggggccaaggcgggcagatcacctgaggtcacaagttcaagactagcctggtcaacatagaaaaaccctg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr24 1216404 836 + 28733288 aatggtgaaaaactaaaaacttttcctctaggatcaggaacaagatagcaacatctcctcctgccacttctattcaccacagtactggaatttctacttagaataattaggcaagaaaaataaattaagagcatgcaaattggaaagg---aagtacaaaattttgttcacagacaacaggatgtaatgtgtaaaaatcctgaaattccacaaaatactggtagaataatgaaattcaac-aaagtttcaggatacagtaacacacacaagtcagttgcatttctataaactaacaaggaacaatctgcaaataaaattttaaaaagagaggccaggtgcagtggctcacgtttgtaatcccagcactttgggaggccaaggcgggtggatcacctgagggcaggagtttgtgaccagctgggccaaccccatctctaatataaatagtaaaactctgtctctattaaaaatacaaaaattagctgggcgtagtggcagacacctgtagtcccagctacttgggaggctgaggcaggagaattgcttgaacttggaaggtggaggttgcagtcagctgagattgtgccactgcactccagcctaggaaacagagtgagatgcagtctcaaaaaaaa-gaaacaaaagaaagagagagaaagaaaagaaaaaaaagaaaagaaagaaaaagaaaacaaaagaaaagaaatatttaaaaagagttacatttggccaggcgcggtggctcatgcctgcaatcccagcacttt-gggaggccaaggcgggcagatcacctgaggtcacaagttcaagactagcctggtcaacatggaaaaaccctg i nomLeu3.chr24 I 332 C 0 e calJac3.chr7 35346831 2550 + 155834243 I a score=2434109.000000 s hg38.chr1_KI270707v1_random 14744 3294 + 32032 tctctactaaaaataccaaaaagttagctgggcgtggtggcgtgcacctgtgatcccaggtacttgagaggctgacgttggagaattgcttgaataaggaaggtgcaggttgcagtgacctgagatagtgccactgcactccagcctggaagacagagcaagactccatctcaaaaaaaaaagt-at---tacatttacaacagcattataaaaattataaataagcttaaccaagagggcaaaagatttgaacacagaaaactacaaaacactgttgaaagaaattaaacacaaatacatgaaaagaaaagctgggtttgcagattagatgatttcatcttggaatgatgtcaacactactcgaagtgacctagattcaatacaatccttataaagattccaatgacatttttgataaacagaaaaacctatcctaaaattcatatggaatccccagggcccatgaataggcaaatcgatcttgaaacagaacaaaattaaaggtctcaaaa-caattacaaaactgc--aataagcc--------aaaaaaaatgtggtcatggcataaagacactcttgacacacttatggaccaacacaacagagaccttagaaaccaaccctggcatatatggtccaatgaccttccacaaggatgccaagaccactcaatggtgaaggacagtttctgcaacaaattgtgttgggaaaattgtatatctacatgcaaaacagtgaagttggactcttaccttacaccacgttaaaattaattcaaagtgaattataaacctaaatgtaaaactagaactatcaaactcctagggaaaacaaatttggaaaatgctttatgacgatgaatttgtgaataatttttaggatatgacattaaaagctcaggcagtaaaagcaaaa----atatatcaaacctaaaaacttctgtacctcaaaggtcacaaccaacagggtaaaaggcaaactgtagaataaaagaaaataccagttgagtgtcccttatttgaaatgcttgggatgtgtttcagattttgtaatatttgcactattcttactggttgagcatctcgaattcaaacacctgagtctgagatgctccaataagcatttcctttgaatgtcatgttggcactcaaaaagtttcagactttggagcatttgggatttcagatttttggatcagagacattcaatctatagttgctcatcatgtatctcataagaagtgaacatacagaatacgtaaagaactcctacaGAGAGACTACCAGAAGCAGAGAGGAGCAAACACACTTTCACACTAGGGCACCTCCTATCTCTCCTGGATTCCAATTAGGGCAGAGTAAGTGCTAGTTCTCTGCCAACATAGGATTAGGCCCTGCAGCTGCAGTGAAAATAATCACAGAAGAAAACTAAGAAATAAAAAATGGAGAAAGTGAGACATCAAACTAGAATTACTAGAATCCCCTAGGAAGAAGGaaaaaaaaa--aacaaaacagaaaaaCAGTCAAA-CCAGATAATTAAACCTTGGTGTGACCAGAAGATCAGGGTTTCCTAAAGGAGTGGAAATTTATTGACTTGAAGATGATTTATTGATTACTGATTTGAAGAGGAAGAAAAACCATGAATGGTCTAAAGCAAAAGCCTAGTGTCTGAAGAAGTCAGTAGGGTGAAAACAAGAGCTGGCCAGAATGTCCACAGATGGTGACAAGTTTGCAAAGCCTTTACTAGACTACTTGTGAGGCTAACTAGAGGCCAAGGAGCCAACACTGCCCCTGTCCTTACAGAGAGACCCTACACAGGATTCCCAGATATACATGGAAGGACAACATCTTATCAGGTCCTCTCTGTGCAGATGTGGTTATCATTCCAAATAATGAGCTCCAGCACCAAGACTGTTCCATCCTCAATTGCTTTGAGTGGGCAATGTAGGCTTTCCACACACGAGCTACATGTAGGTTCCTTGGGTACCCAGATGGGAGCCGTGAAACACAAACCTTCCATGGTCAGGTCCGTATCTGTTTCCTGCCTTTTCCCCAGCAATCCCCAGGCCTCAGCAGCAGTGGTCTACCTCTGCTGATTCTCATTCAGAATCTAAACTTAGAAACAATTAGAACCTAGACCCCAATTCTACCTGAAAGTAACAGAATAACATAATCTATACCCTGAAGCATGACTGTTT-----GCCCAACGTAATGAGGATGAACTGAGAGATAATGAATGACCATGACCCTGGCCCAAGTAACAAGAATGAACTGTGAGATAAATGAATGATCATGACCAAAAAACCCCActacaaca---caacaacaaaataaagtgatt-aaaaaatggacaaagaacatttatccaaagatgcaaagatgatataaaaatagccaacagatacatgagatatatgagaagatgtgtaacatcactagtcattaaagaaatgcaaatagaaaccacaatgggacatcacttctaacccaacagatagtaacaagtgcaggtgaaactgaaacccttgaacactgttggtggaaatatgaactggctcctcaaaaaaaaataaaataaaatgaccatatgatccagccatccaacttctac--agagacagaataactagtagcaggaactcaaacagatatgtgcacacctatgttcacaggagcattacacagccacaa-gtggaagaaa---ccaaaacgtccatccaggaatagatggataaacaaaaggatatatatatatagagagagagagagagaaaaaaatatatatatatatatgaagaaatattattcagcaatagaaaggaagaaaatcctgacacttctgacacataacatggaacctactta-caaaacaacaaatattatataaccctaggtatataagccaaagttttagaaacacaaagtagaatagtacttgccaggaggtggaaggaacgggaaattaatagttgttgaatgagtatagagttttccaaga-t------aaaaaaacatctagaaatctgctacacaacactgtaaatattcttaactctacaaaactgtacacttacaactggttatgatggtaaattttaaggtatgtgtttgttaccaaaattcaaaaTAATaaattatttataaaaaatgatcttttttgacacaggatcttactctgttgccctggcaggagtgcaatggcatgatcacagctcattgcagcctcaaactcccaggctcaagcaacccttccacctgagcctcccaaatagttgggactacagatgcacaccaagatgtcaggctaaagtttg-----------------------gtttggtttttttg s panTro4.chr4_GL389940_random 35534 3281 - 103824 tctctactaaaaataccaaaaagttagctgggcgtggtggcacgcacctgtgatcccaggtacttgagaggctgtcattggagaattgcttgaataaggaaggtgcaggttgcagtgacctgagatagtgccactgcactccagcctgggagacagaacaagactccatctcaaaaaaaaaata-ataattacatttacaaca---ttaaaaaaattagaaattagcttaaccaagagggcaaaagatttgaacacagaaaactacaaaacactattgaaagaaattaaacacaaataaatgaaaagaaaagctgggtttgcagattagatgatttcatcttggaatgatgtcaacactactcgaagtgacctagattcaatacaatccttataaggattccaatgacatttttgataaacagaaaaacctatcctaaaattcatatggaatctccagggcccatgaataggcaaatcgatcttgaaacagaacaaaattaaaggtctcaaaa-caattacaaaactgc--aataagcc--------aaaaaaaatgtggtcatggcataaagacactcttgacacacttatggaccaacacaatagagacctcagaaaccaaccctggtatatatggtccgatgatcttccacaaggatgccaagaccactcaatggcaaagcacagtttcttcaacaaatggtgttgggaaaattgtatatctacatgcaaaacagtgaagttggactcttaccttacaccacgttaaaattaattcaaagtgaattataaacctaaatgtaaaactagaactatcaatctcctagggaaaacaaatttggaaaatgctttatgacgatgaatttgtcaataatttttaggatatgacattaaaagctcaggcagtaaaagcaaaa----atatatcaaacctaaaaacttctgtacctcaaaggtcacaaccaacagggtaaaaggcaaactgtagaataaaagaaaataccagttgagtgtcccttatttgaaatgcttgggatgtgtttcagattttgtaatatttgcattattcttactggttgagcatctcgaattcaaacacctgagtctgcgatgctccaataagcatttcctttgagtgtcatgttggcactcaaaaagtttcagactttggagcatttgggatttcagatttttggatcagagacattcaacctatagttgctcatcatgtatctcataagaagtgaacatacagaatacgtaaagaactcctacaGAGAGACCACCAGAAGCAGAGAGGAGCAAACAGATTTTCACACTAGGGCACCTCCTATCTCTCCTGGATTCCAATTAGGGCAGAGTAAGTGCTAGTTCTCTGCCAACCTAGGATTAGGCCCTGCAGCTGCAGTGAAAGTAATCACAGAAGAAAACTAAGAAATAAAAAATGGAGAAAGTGAGACATCAAACTAGAATTACTAGAAACCCCTAGGAAGAAGGAAAAAACAA--AACAAAACAGAAAAACAATCAAA-CCAGTTAATTAAACCTTGGTGTGACCAGAAGATCAGGGTTTCCTAAAGGAGTGGAAATTTATTGACTTGAAGAGGATTTATTGATTACTGATTTGAAGAGGAAGAAAAACCATGAATGGTCTAAAGCAAAAGCCTAGTGTCTGAAGAAGTCAGTAGGGTGAAAACAAGAGCTGGCCAGAATGTCCACAGATGGTGACAAGTTTGCAAAGCCTTTACTAGACTACTTGTGAGGCTAACTAGAGGCCAAAGAGCCAACACTGCCCCTGTCCTTACAGAGAGACCCTACACAGGATTCCCAGATATACATGGAAGGACAACATCTTATCAGGTCCTCTCTGTGCAGATGTGGTTATCATTCCAAATAATGAGCTCCAGCACCAAGACTGTTCCATCCTCAATTGCTTTGAGTGGGCAATGTAGGCTCTCCACACACGAGGTACATGTAGGTTCCTTTGGTACCCAGATGGGAGCCGTGAAACACAAACCTTCCATGGTCAGGTCCGTATCTGTTTCCTGCCTTTTCCCCAGCAATCCCCAGGCCTCAGCAGCAGTGGTCTACCTCTGCTGATTCTCATTCAGAATCTAAACTTAGAAACAATTAGAACCTAGACCCCAATTCTACCTGAAAGTAACAGAATAACATAATCTATACCCTGCAGCATGACTGTTT-----GCCCAACGTAATGAGGATGAACTGAGAGATAATGAAAGACCATGACCCTGGCCCAAGTAACAAGAATGAACTGTGAGATAAATGAATGATCATGACCAAAAATCCCCActacaaca---caacaacaaaataaagtgatt-aaaaaatggacaaagaacatttatccaaagatgcaaagatgatatacaaatagccagcagatacatgagatatatgagaagatgtgtaacatcactagtcattaaagaaatgcaaatagaaaccacaatgggacatcacttctaacccaacagaaagtgacaagtgcaggtgaaactgaaacccttgaacactgttgttggaaatatgaactggctcctcaaaaaaaaat-aaataaaatgaccatatgatccagccatccaacttctac--agagacagaataactagtagcaggacctccaacagatatgtgcacacctgtgttcacaggagcattacacagccacaaggtggaagaaa---ccaaaacgtccatccaggaatagatggataaacaaaaggatatatatatatagagagagagaga---aaaa------atatatatatatgaagaaatattattcagccat----aggaagaaaatcctgacacatctgacacataacatggaacctactta-caaaacaacaaatattatataaccctaggtatataagccaaagttttagaaacacaaagtagaatagtacttgccaggaggtggaaggaaggggaaattaatagttgttgaatgggtatagagttttccaaga-t------aaaaaaaaatctagaaatctgctacacaacactgtaaatattcttaactctacaaaactgtacacttacaactggttatgatggtaaattttaaggtatgtgtttgttaccaaaatttgaaaTAATAAATTATTTATaaaaaatgaacttttttgacacaggatcttactctgttgccctggcaggagtgcaatggcatgatcacagctcattgcagcctcaacctcccaggctcaagcaaccctcccacctgagcctcccgaatagttgggactacaggtgcacaccaagatgtcaggctaaagtttg-----------------------gtttggtttttttg i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42321091 3204 + 202140232 tctctactcaaaat-ccaaaaaattagctgggtgtggtggcgcacacctgtgattccagctacttgagaggctgaggttgaagaatcgcttgaataaggaaggcagaggttgcagtgagctaagatagtgccactgcactccagcctgggagacagagcaagactccatctcaaaaaaaagaaa------tacttttacaacagcattttaaaaattagaaataagcttaaccaagagggcaaaagatttgaacacagaaaactacaaaacactgttgaaagaaattaaacacaaataaatgaaaagaaaagctgggtttgcagatcagatgatttcatcttggaatgatgtcaacactactggaagtgacctagattcaatacaatccttataaagattccaatgactttttttataaacagaaaaacccatcctaaaattcatatggaatctccagggcccatgaataggcaaatcaatcttgaaacagaacaaaatt-aaggtctcaaaa-caattacaaaactgc--aataagcc-------aaaaaaaaatgtggtcatggcataaagacacacttgacacacttatggactaacacaacagagacctcagaaaccaaccctggcatatatggtccaatgatcttccacaaggatgccaaggccactcaatgttgaaggatagtttcttcaacaaatggtgctgggaaaattgtacatccacatgcaaaacaatgaagttggactcttaccttacaccatgttaaaattaattcaaagtgaattataaacctaaatgtaaaactagaactatcaaactcctagggaaaacaaattttgaaaatgctttatgacaatgaatttgtcaataatttttaggatatgacattaaaagctcaggcagtaaaagcaaaa----atagatcaaacctaaaagcttctgtacctcaaaggtcacaaccaacagagtaaaaggcaaa--gtagaataaaagaaaataccagttgagtgtcccttatttgaaatgcttgggatgtgtttcagattttgtaatatttgcattattcttactggttgagcatctcgaattcaaacacctgagtctgagatgctccaataagcatttcctttgagtgtcatgttggcactcaaaaaatttcagactttggagtatttgggatttcagatttttggatcagagacattcaacctatagttgcacatcatgtgtctcataagaagtgaacatccagaatacataaagaactcctacaGAGAGACTACCAGAAGCAGAGAGGAGCAAACATACTTTCGCACTAGGGTACCTCCTATCTCTCCTGGATTCCAATTAGGGCACAGTAAATGCTAGTTCTCTGCCAACCCAGGATTAGGCCCTGCAGCTGCAGTGAAAATAATCACAGAAGAAAACTAAGAAATAAAAAATGGAGAAAGTGAGACATCAAACTAAAATTACTAGAAACCCCTAGGAAGAAGGAAAAAGAAACCAAGAAACCAGAAAAACAATCAAA-CCAGGTAATTAAACCTTGGAGTGACCAGAAGATCAGAGTTTCCTAAAGGAGTGAAAATTTATTGATTTGAAGAGGATGTATTGATTATTGATTTGAAGAGGAAGAAAAACCATGAATAGTCTAAAGCAACAGCCTAGTGTCTGAAGAAGTCAGTAGGGTGAAAACAAGAGCTGGCCAGAATGTCCACAGATGGTGACAAGTTTGCAAAACCTTTATTAGACTACTCATGAGGCTAACTAGAGGCCAAGGGGCCAACCCTGCCCCTGTCCTTACAGAGAGACCCTACACAGGATTCCCAGATATAGATGGAAGGATAACATCTTATCAGGTCCTCTCTGTGCAGATGTGGTTATCATTCCAAATAATGGGCTCCAGCCCCAAGCCTGTTCCATCCTCAATTGCTTTGAGTGGCCAGCGTGGGCTCTCCACACACGAGCTACATGTAGGTTCCTTGGGTACCCAGATGGGAGCCATGAAACACAAACCCTCCATGGTCAGGTCCGTATCTGTTTCCTGCCTTTTTCCCAGCAGTGCCCAGGCCTCAGCAGCAGTGGTCTACCTCTGCTGATTCTCATTCAGAACCTAAACTTAGAGACAATTAGAACCTGGACCCCAATTCTACCTGAAAGTAACAGAATAACATAATCTATACCCTGCAGCATGACTGTTT-----GCCCAACATAATGAGGATGAACTGTGAGAT--------------------------------------------------AATGAATGATCATGACCaaaaaaccctgctacaacc---caacaacaaaataaagtgatt-aaaaagtggacaaagaacatttatccaaagatgcaaagatgatatacaaatagccaacagatacatgagatatatgagaagatgtgtaacatcactaatcattagagaaacgcaaatagaaaccacaatgggacatcacttcaaacccaacagaaagtaatgagtgcaggtgaaactgaaacccttgtacactgttggtggaaatatgaactggctcctcaaaaaaaaataaaataaaatgaccatgtgatccagcaatccaacttctacagagagacagaataactagtagcaggacctcaaacagatatatgcacacctatgttcacagcagcattacacagccataaggtggaagaaa---caaaaacgtctatccaggaatggatggataaatgaaagg--------------------------------------atatatatatacaaagaaatattattcagccatagaaaggaagaaaatcctgacacatctgacacacaacatggaacctactta-caaaacgacaaatattatataactccaggtatataagtcaaatttttagaaacacaaagtagaatagtacttgccaggaggtgaaagg-aggggaaattaatagttgttgaatgcgtatagagttttccaagatt------aaaaaaaaatc--gatatctgctacacaacactgtcaatattcttaactctacaaaactgtatacttacaactggttatgacggtaaattttaaggtacgtgtttgtcaccaaaatttgaaaTAGTAAATTATTTATAAAAAATGAttttttttgacacagggtcttactctgttgccctggcaggagtgcaatggcatgatcacagctcactgcagcctcaacctcccaggctcaagcaaccctcccacctcagcctcccgaatagttgtgactacagatgcacaccacgatgtcaggctaatttttg-----------------------gtttggtttttttg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr24 1217240 3199 + 28733288 tctctactaaaaataccaaaaaatcagctaggcgtggtggcgcacacctgtgatcccagctacttgagaggctgaggttggagaattgcttgagtaaggaaggcagaggttgcagtgagctgagatagtgccactgcactccagcctgggagacagagcaagactccatctcaaaaaaaaagaa--t---tacatttacaacagcattttaaaaattagaaatacgcttaaccaagagggcaaaagatttgaacacagaaaactacaaaacactgttgaaagaaattaaacacaaataaatgaaaagaaaagctgggtttgcagattagatgatttcatcttggaatgatatcagcactattcgaagtgacctagattcaatacaatccttataaagattccaatgacatttttgataagcagaaaaacccatcctaaaattcatatggactctccagggcccatgaataggcaaatcaatcttgaaacagaacaaaattaaaggtctcaaaa-caatt-----actgc--actaagccaaaaaaaaaaaaaaaatgtggtcatggcataaagacacacttgacacacttatggaccaacacaacagagacctcagaaaccaaccctggcatatatggtccgatgatcttccacaaggatgccaagaccactcaatggtgaaggacagtttcttcaacaaatggtgttgggaaaattgtatatccacatgcaaaacaatgaagttggactcttaccttacaccacgttaaaattaattcaaagtgaattataaacctaaatgtaaaactagaactatcaaactcctagggaaaacaaatttggaaaatgctttatgacaatgaatttgtcaataatttttaggatatgatattaaaagctcaggcagtaaaagcaaaa----atagatcaaacctaaaagcttctgtacctcaaaggtcacaaccaacagagtaaaagacaaactgtagaataaaagaaaatgccagttgagtgtcccttatttgaaatgcttgggatgtgtttcagattttgtaatatttgcattattcttactggtagagcatctcgaattcaaacacctgagtctgagatgctccaataagcatttcctttgagtgtcatgttggcactcaaaaagtttcagactttggagcatttcggatttcagatttttggatcagagacattcaacctatagttgcacatcatgtatctcataagaagtgaacatccagaatacataaagaactcctacaGAGAGACTACCAGAAGCAGAGAGGAGCAAACACGTTTTCACACTAGGGTACCTCCTATCTCTCCTGGATTCCAATTAGGGCAGAGTAAATGCTAGTTCTCTGCCAACCCAGGATTAGGCCCTGCAGCTGCAGTGAAAATAATCACAGAAGAAAACTAAGAAATAAAAAATGGAGAAAGTGAGACATCAAACTAAAATTACTAGAAACCCC-AGGAAGAAGGAAAAAGAAACCAAGAAACCAGAAAAACAATCAAA-CCAGTTAATTAAACCTTGGAGTGACC---AGATCAGAGTTTCCTAAAGGAGTGGAAATTTATTGATTTGAAGAGGATTTACTGATTATTGATTTGAAGAGGAAGAAAAACCACGAATGGTCTAAAGCAACAGCCTAGTGTCTGAAGAAGTCAGTAGGGTGAAAACAAGAGCTGGCCAGAATGTCCACAGATGGTGACAAGTTTGCAAAACCTCTACTAGACTACTCGTGAGGCTAACTAGAGGCCAAGGAGCCAACCCTGCCCCTGTCCTTACAGAGAGACCCTACACAGGATTCCCAGATATAGACAGAAGGACAACATCTTATCAGGTCCTCTCTGTGCAGATGTGGTTATCATTCCAAATAATGAGCTCCAGCCCCAAGCCTGTTCCATCCTCAATTGCTCTGAGTGGCCAATGTGGGCTCTCCACACATGAGCTACATGTAGGTTCCTTGGGTACCCAGATGGGAGCCGTGAAACACAAACCCTCCATGGCCAGGTCCCTATCTGTTTCCTGCCTTTTTCCCAGCAGTCCCCAGGCCTCAGCAGCAGTGGTCTACCTCTGCTGATTCTCATTCAGAACCTAAACTTAGAGACAATTAGAACCTGGACCCCAATTCTACCTGAAAGTAACAGAATAACATAATCTATACCCTGCAGCATGACTGTTT-----GCCCAACGTAATGAGGATGAACTGTGAGAT--------------------------------------------------AATGAATGATCATGACCAAAAAACCCCGctacaacc---caacaacaaaataaagtgatt-aaaaaatggacaaagaacatttatccaaagatgcaaagatgatatacaaatagccaacagatacatgagatatatgagaagatgtgtaacatcactaatcattaaagaaatacaaatagaaaccacaatgggacatcacttcaaacccaacagaaagtaacaagcgcaggtgaaagtgaaacccttgtacactgttggtggaaatatgaactggctcctc-aaaaaaaataaaataaaatgaccatatgatccagccacccaacttctatagagagacagaataattagtagcaggacct----cagatatgtgcacacctatgttcacagcagcattacacagccacaaggtggaagaaa---ccaaaacgtctatccaggaatggatggataaacaaaaggat------------------------------------gtatacatatacaaagaaatattattcagccatagaaaggaagaaaatcctgacacatctgacacataacatggaacctacttatcaaaacgacaaatatcatataaccccaggtatataagtcaaatttttagaaacacaaagcagaatagtactttccaggaggtggaagg-agaggaaattaatagttgttgaatgcgtatagaattttccaaga-t------taaaaaaaatc--gatatctgctacacaacactgtcagta--cttaactctacaaaactgtatacttacaactggttattatggtaaattttaaggtatgcgtttgtcaccaaaattcgaaaTAATAA---ATTTATAAAAAATGATCTCttttgacacagggtcttactctgttgccctgacaggagcgcaatggcatgatcacagctcactgcagcctcaacctcccaggctcaagcaaccctcccacctcagcctcctgaatagttgcgactacaggtgcacaccacgacgtcaggctaatttttg-----------------------GTTTGGTTTTTTTG i nomLeu3.chr24 C 0 M 100 s calJac3.chr7 35349381 3106 + 155834243 tctctcctaaaaattcaaaaaaattagccaggcatggtggcacctgcctgtgatcctagctacttgagaggctgagattggaggatcacttgaacctgggaggcagaggtttcagtaagccgagacagcgccactacactccagcctgggagacagagcaagactccatcgcaaaaaaaaaaaaaaT---TAcacttacaacagcattttaaaaattagaaataagctgaaccaagagagcaaaagatttgtacacaaaaaactacaaaatattgctgacataaattaaacactaacaaatggaaagaaaagctgggtttgtagattagattatttcatcttggaatgttgacaacactattcaaagtgacccagattcaatacaatccttataaagattccaataacattttcaaaaaacagaaaaacccatcctaaaatgcatatggcatctccagggcccatgaacaggcaaatcaatcttgaaacagaacaaagta-aaggtctcaaaaccaattacaaagctgcataacaaaaa--------aaaaatagtgtggcagcggcataaa---------gacacacttatggaccaacagaatagagatctc-taaatcaaccctggcatatatggtctgatgatcttccac-agggtgtccagaccactcaatggtgaaagacagtttcttcaacaaatggtgttgggaagactggatatccacatgcagagcaatgtagtcagactcttaccttataccgtgttaaaaccaactcacagttaattataaacctaaatgtaagagtagaac-ataaaactcctagggaaaaaaaa-ttggaaaatgttttacgacaataaatttttcaataaattttaggctatgacattaaaagctcaggcagtaaaaacaaaaatagatagatcaaacctaaaagcttctg-acctcaaaggtcacaatcaacacaataaaaggcaaactgtggaataaaaaaaaataccagttgagtgtcctttatttgaaatgcgtgggatgtgtttcagattttgtaatatttgcattattcttactgattgagcatcttgaattcaaa-acttgagtctaaaatgctccaataagcatttcctttgagtgtcatgttggcactcaaaatgtttcagactttggagtatttgggatttcagatttttagatatgagacactcaacctatagttgcacgtcacgtatctcataagaagtgtgcatccaggagacataaagaactcccacaGGGAGACCACCAGAAGCAGAAAGGAGCAAACACATCTTCACACCAGGGCACCTTCCATCTCTCCTGGATTCCAATTAGAGCAGAGTAAGTGCTAGTTCTCTGCCAACCCAGGATTAGGCCCTGTAGCTGCAGTGAAAATAATCACAGGAGAAAACTAAGAAATAAAAAATGTAGAAAGGGAGACATCAAACTAAAATTACTAGAAACCCCAAGGAAGAAGTAAA--------AAGAAACCAGAAAAACAATCAAACCCAGTTAATTAAACCTTGGGGTGACCAGGAGATCAGAGTTTCCTAAAGGAGTGGAAATGTATTGATTTGAAGA---------------------GCTGAGGAAGAAAAATCATGAATGGTCTAAAGCAACAGCCGAGTGTCTGAAGAAGTCACTAGGGTGAAAAGAAGAGCTGGCCAGAACATTCACACATGGTGACAAGTTTGCAAAACCTTTACTAGACCACTCATGAGGCTAACTAG-GGCCAAGGAGCTAACCCTGGCCCTGTGCTTATAGAGAGACCCTACACAGAATTCCTAGACAGAGATGGAAGGACAACATCTTATCAGGTCCTATTTGTGCAGATGTGGTTATCTTTCCAAATAATGAGCTCCAGCCCCAAGCCTGTTCCATCCTCAATTGCTCTGAGTGGCCAGTGTGGACTCCCCACATATGAGCTACATGTGGGTTCC-TGGGTACCCAAATGGGAGCCGTG-AACACAACCCCTCTATGGTCAGGTCTGTATCTGTTTCCTGCCTTTTTCCCAGCAGCCCTGAGGCCTCAGCAGCAGCGGTTTACCTCTGCTAATTCTCATTCAGAACCTGAACTTAGAGGCCATTAGAACCTGGACCCCAATTCTACCTGAAAGTACCAGAATAACATAACCTATACAATGCTGCATGACTGTTTGCCTGGCCCAATGTAATGAGAATAAACTGTGAAAT-------------------------------------------------AAACAAACAATCATGACCCaaaaacct--ctgtaacccaacaacaacaaaataaagtgattaaaaaaatggacaaagaacatttatccaaagacacaaagatgatatacaaatagccaacagatacatgagacatatgaaaagatgtataacatcactcatcattaaagaaatgcaaatagaaaccac-atgagatatcacttcatacccgacagaaaataacaagtgcaggtgaaagtgaaacccttgtgcactgttggtggaaatataaactggctcctcaaaaagaaatgacataaaattaccatatga---gtctatccagaatggatggataaacaaa------------aggaagt-------atatataca----------caaagaaatattactcagccaaagaaaggaagaaaatcccgacacgttataacagggagccttg----------agg--------------------------------------acat---tatgcaaagtaaaatatgctacttacaaaa----------------------tgacaaata-------------tta-tataactcca-----------------ggcatatgagtccaa-ttgtagaaacacaaagtagaatagtagttgccagaaggtggaaggagggggaaatcaatagttgttgaatggctacagagttttccaaga-ttaaaaaaaaaaaaaacctagatatctgctacacaacattgtaaatattcttaatgctacaaaactgtatactgaatactggttatgatagtaaattttaaggtatgtgtttatcaccaaaattcgaaaTAGta----atttattaaaaattat-ttatttgacaaagggtcttactctgttgccccagcaggagtggaaaggcatgatcacagctcactgcagcctcaacctcccaagttcaagcaactctcctacct--gtctcccagatagttgggactgtacctatacaccacaacatcaggctaatttttgttttgttttgggtttttgtttttgttaggtttttttg i calJac3.chr7 I 2550 C 0 a score=60926.000000 s hg38.chr1_KI270707v1_random 18038 133 + 32032 --tagagagggttttcccatgttgcccaggctggtctcaaactcctgggctcaagcaatccacctcccttggactcccacagagctgagattatgagcataagccaacatgcccagcctataaaaaattatttca s panTro4.chr4_GL389940_random 38815 133 - 103824 --tagagagggttttcccatgttgcccaggctggtctcaaactcctaggctcaagcaatccacctcccttggactcccacacagctgagattacgagcataagccaacatgcccagcctataaaaaattatttca i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42324295 133 + 202140232 --tagacagggttttgccatgttgcccaggctgatctcaacctcctgggctcaaccaatccacctgccttggcctcccacagagctgagattacaagcatgagccaccatgctcagccTATAAAAAATTATTTCA i ponAbe2.chr3 C 0 M 268 s calJac3.chr7 35352487 135 + 155834243 taaagacagggttttgccatgttgcccaggctggtctcaacctgctgggctcaagcaatcaacctgccttggcctcccaaagtgttaagattacaagcatgagccaccatgcccagcatataaaaatttttttCa i calJac3.chr7 C 0 C 0 e nomLeu3.chr24 1220439 100 + 28733288 M a score=5430.000000 s hg38.chr1_KI270707v1_random 18171 24 + 32032 aaaagccaaaagattaatcaaact s panTro4.chr4_GL389940_random 38948 24 - 103824 aaaagccaaaagattaatcaaact i panTro4.chr4_GL389940_random C 0 C 0 s calJac3.chr7 35352622 24 + 155834243 aaaagccaatagataaataaaact i calJac3.chr7 C 0 C 0 e nomLeu3.chr24 1220439 100 + 28733288 M e ponAbe2.chr3 42324428 268 + 202140232 M a score=600.000000 s hg38.chr1_KI270707v1_random 18195 1 + 32032 g s panTro4.chr4_GL389940_random 38972 1 - 103824 g i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42324703 1 + 202140232 g i ponAbe2.chr3 M 268 C 0 s calJac3.chr7 35352646 1 + 155834243 g i calJac3.chr7 C 0 C 0 e nomLeu3.chr24 1220439 100 + 28733288 M a score=82369.000000 s hg38.chr1_KI270707v1_random 18196 107 + 32032 gaatatttagaaatat----ttaacccaaaagaagttaggaaagaatatatagaagatcaaaagacagacgaaggccaggcatggtggctcatgcctgtaatctgaacaat s panTro4.chr4_GL389940_random 38973 107 - 103824 gaatatttagaaatat----ttaacccaaaagaagttaggaaagaatatatagaagatcaaaagacagacgaaggccaggcatggtggctcgtgcctgtaatctgaacact i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42324704 107 + 202140232 gaatatttaaaaatatttaattaacccaaaagaagttgggaaagaatatatagaagatcaaaagaca----aaggccaggcatggtggctcacacctgtaatcccaacact i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr24 1220539 111 + 28733288 GAATATTtagaaatatttaattaacccaaaagaagttaggaaagaatatatagaaaatcaaaagacagacgaaggccaggcatggtggctcacgcctgtaatcccaacact i nomLeu3.chr24 M 100 C 0 s calJac3.chr7 35352647 111 + 155834243 gaatatttagaaatgtttaattaactcaaaagaagttagaaaacaaaatagagaagatcaaaagacaggtgaaggccaggaatggtggctcacacctgtaatccaaacaat i calJac3.chr7 C 0 I 1896 a score=1026081.000000 s hg38.chr1_KI270707v1_random 18303 2087 + 32032 ttgggatgccaaggtgggtaggttgcttgagctcaggagttcaagatcagcctgtgcaacatggcaaaactctatctctacaaaaaatataaaaattagccaggtgtgttgccatgcacctgtagtcccagctactcagggggctcaagtgaggattggttgggcctgggaggcagaggttgcagtgagccaagattgcaccattgcactacagtctgggtgacagagtaagaccctgtcttaa----aaaaataaacaaacaaatagaaaataagtagaaaaatggcagacctaaatccaaccttagcagtgattagttacaatgtaactggacaaatactctacttaagacagagactgccagacctgagaggaaggcaagacccaacaatatggcatccacagagacaaaatttaaacacaaagacacaaacaaagtatgagaaaaaatatgctatgcagacactaatcttaaaaatatgctatccagacactaatcataaaaagcttcaacagagatgttaacactagatgaaagaggcttcagagcaaaatatatcaccagaaataaacagggtaatttaataaaaataaaataatcagagaggatgatgttacaattataaattgtgcctcaaagtgcacacaaatt--acacacacacacagagcctcaaa-tatgtgaatcaaaaacaacag-acaaaagcaggaaattgacaatccaaaattatagctggtgaattaatactgctctctcagtaactgatggaacaaccagataaaaatataggaaaaatatggatctaaatgacaaaatcctgacccaaatggtactt----------------ggcagtaccaagataaactgtatgtcgatcgattgagaaaaggttcaagcctgaaatagtatacaaagtatgttgtctgaacacttgaaattaaattagaaaccaacaacaaattgatatccagaaaagcctcaaatgtctgaaaaccaagtaataaactttgaaataccctgtgagtc-----aaaaagtattcacaaggggaactggaatgtatttggaacaaacttgttataaaaatCTCATTTCtggtagactagaggtgacaacttctttcctgctcctctctctgtgaggaccaattccccttaaaccttgaccagactactgacttatttggccaacagaaggtgacaaaggtggtatttggggacttcagaagccaggctgagaaaacagaacacttatccaggagaaagccagtcaccaggcaggaaatcccactcccctgaga-cctcatgatggaaaccacacggccagtccatgactagctacatgcattgacat-ccccactgagcctccagcaacaccgactcccaacaactagtgagcctccagcaacatccactcccaaccactagtgagccaccctgcacacaaccccactgtgctttcacacaatccaacttg-----------gctgcaacggtg--tgtgagatgagctgaccaccaagactctctaagccaaaaaac--aagtaataatgagttgttttaagctgccaagttttggggatggtttcttcagaatagaaaactggaacaGAATATGACCGctggaaatgagctgctgtggtaatcagaagctacaatatgtgacacgactgtgaggctgacctgtaactgggcctcaaggaga-----ccattcatgcaacctggaagagcatcaagactcttggtcagggcctgaaggatggtgagaaaatgtcattggaaactggagaaaaggcctgagagttacgtgctgagggactgtgggaaaactatggccacaacatggaaactgaaagggcactgcaccatctcagggatctgcctaaggagacatctgggaagaacatggaaagtgctaccagcctcccctaactgtcactgaataaatatgacaggagagggacatgatctaaacaaggaggttcagttttcaaacagaatttagagaaaatataaagaaATAATTTCTTGTCTCAAAAGGCCAAAGT------AGaaaaaagaaagaaaagaaaaggaaaaaaaatgaaaaagaaGCCATTGAATACCCTATTGACCCTAAGAAAAAGG s panTro4.chr4_GL389940_random 39080 2097 - 103824 ttgggaggccaaggtgggtaggtttcttgagctcaggagttcaagaccagcctgtgcaacacggcaaaactctatctctacaaaaaatataaaaattagccaggtgtggtgccatgcacctgtagtcccagctactcagggggctcaagtgaggattggttgggcctgggaggcagagtttgcagtgagccaagattgcaccattgcactacagtctgggtgacagagcaagaccctgtcttaa---gaaaaataaacaaacaaatagaaaataagtagaaaaatggcagacctaaatccaaccttagcaatgattagttacaatgtaactggacaaatactctacttaagacagagactgccagacctgagaggaaggcaagacccaacaatatggcatccacagagacataatttaaacataaagacacaaac-aagtatgagaaaaaatatgctatgcagacactaatcataaaaatatgctatccagacactgatcataaaaagcttcaacagagatgttaacactagatgaaagaggcttcagagc-aaatatatcaccagaaataaacacggtaatttaataaaaataaaagaatcagagaggatgatgttacaattttaaattgtgcctcaaagtgcacacaaattacacacacacacacagagcctcaaagtatgtgaatcaaaaacaacagaacaaaagcaggaaattgacaatccaaaattatagctggtgaattaatactgctctctcagtaactgacggaacaaccagataaaaatataggaaaaatatggatctaaacgacaaaatcctgacccaaatggtactt----------------ggcagtaccaagatagactgtatgtcgatcgattgagaaaaggttcaagcctgaaatagtatacaaagtatgttgtctgaacacttgaaattaaattagaaaccaacaacaaattgatatccagaaaagcctcaaatgtctgaaaaccaagtaataaactttgaaataccctgtgagtc-----aaaaagtattcacaaggggaactggaatgtatttggaacaaacttgttataaaaatCTCATTTCtggtagactaaaggtgacaacttctttcctgctcctctctctgtgaggaccaattccccttaaaccttgaccagactactgacttatttggccaacagaaggtgacaaaggtggtatttggggacttcagaaaccaggctgagaaaacagaacacttatccaggagaaagccagtcaccaggcaggaaatcccactcccctgaga-cctcatgatggaaaccacatggccagtccatgactagctacatgcattgacatcccccactgagcctccagcaacaccgactcccaacaactagtgagcctccagcaacatccactcccaaccactagtgagccaccctgcacaccaccccactgtgctttcacacaatccagcttg-----------gctgcaactgtg--tgtgagatgagctgaccaccaagactctctaagccaaaaaac--aagtaataacgagttgttttaagctgccaagttttggggatggtttcttcagaatagataactggaacaGAATATGACAGGtggaaatgagctgctgtggtaatcagaagctacaatatgtgacacgactgtgaggctgacctgtaactgggcctcaaggaga-----ccattcatgcaacctggaagagcatcaagactcttggtcagggcctgaaggacggtgagaaaatgtcattggaaactggagaaaaggcctgagagttacgtgctgagggactgtgggaaaactacggccacaacatggaaactgaaagggcactgcaccatctcagggatctgcctaaggagacatctgggaagaacatggaaagtgctaccagcctcccctaactgtcactgaataaatatgacaggagagggacatgatctaaacaaggaggttcaggtttcaaacagaatttagagaaaatataaagaaATAATTTCTTGTCTCAAAAGGCCaaagtaaaaaaaaaaaaaaaaaagaaaagaaaaggaaaaaaaatgaaaaagaagccattgaataccctattgaccgtaagaaaaagg i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42324811 2115 + 202140232 ttgggaggccaaggtgggtagattgcttgagctcaggagttcaagaccagcctctgcaacatggcaaaaccctatctctacaaaaaatataaaaattagccaggtgtggtgccatgcacctgtagtcccagctactcagggggctgaagtgaggattggttgggcctgggaggcagaggttgcagtgagccaagattgcaccattgcactacagtctgggtgacagagcaagaccctgtcttaa---aaaagaaaattaaacaaacagaaaataagtagaaaaatggcagacctaaatccaaccttagtaatgattagttacaatgtaactggacaaatactctacttaagacagagactgccagacctgagaggaaagcaagacccaacaatatggcatccacagagacacaatttaaacacaaagacaca----aagtatgagaaaaaatatgctatgcagacactaatcataaaaatatgctatccagacactaatcacaaaaagcatcaacggagatgttaacactagatgaaagaggcttcagaacaaaatatatcaccagaaataaaca-ggtactttcataaatataaaagaatcagagaggatgatattacagttataaattgtgcctcaaagtgctcataaagt--acacacacacacagagcctcaaagtacgtgaatcaaaaacaacagaacaaaagcaggaaattgacaatccacaattatagctggtgaattaatactgctctctcagtaactgatggaacaaccagataaaaaaataggaaaaatacggatctaaatgacaaaatcctgacccaaatggtatttatgaagcacacagttgagcactaccaagacagactgtatgtccatctattgagaaaaggttcaagcctgaaatagtataaaagata-gttgtctgaacacttgacattaaattagaaaccaacaacaaatagatatccagaaaaggctcaaatgtctgaaaaccaaataataaactttgaaataccctgtgagtcaaaaaaaaaagtattcacaaggggaactggaacatatttggaACAAACTTGTTATAAAAATCACATTTCtggtagactaaatgtgacaacttctttcctgctcctctctctgtcagaaccaattccccttgaaccttgcctagactactgacttatttggccaacagaaggtgacaaaggtggtatttggggacttcagaagccaggctgagagaacggaacacttatccaggagaaagccagtcaccaggcaggaaatccccctcccctggga-ccccatgatggaaaccacacggccagtccatgactagctacacacattgacagcccccactgagcctccagcaacacc--ctccaaaccactagtgagcctccagcaacgcccgctcccaaccactagtgagccaccctgcacaccaccccgctgtgctttcacacaatccagctcagctgctgccctgctgcaactgtg--tgtgagacaagctggccaccaagactctctaagccaaaaaacaaaagtaataatgagttgctttaagctgccaagttttggggatggtttcttcaaaatagataactggaacaGAATACGGCAGCTGGAAATGAGCCGCTGTGGT-ATCAGAAGCTACAACATGTGCCACGACTGTGAGGCTGAGCTGTAACTGGGCCTCAAGGAGACCATTCCATTCACGCaagctggaagggcatcaagactcttggtgagggcctgaaggacagtgagaaaatgtcattggaaactggagaaaaggcctgggaattacgtgcggagggactgtgggaaaactacagccacagcatggaaactgaaagggcactgcatcatctcagggatctgcctaaggagacatctgggaagaatgtggaaagtgctaccagcctcccctaactgtcactgaataaatatgacaggagagggacatgatctaaagaaggaggttcagttttcaaacagaatttagagaaaatataaagaaATAATTTCTTGTCTCAAAAGATCAAAGT------CAAAAAAAAAAAGAAAA------GGAAAaaaatgaaaaagaagccattgaataccccattgaccataagaaaaagg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr24 1220650 2049 + 28733288 ttgggaggccaaggtgggtagattgcttgagctcaggagttcaagaccagcctgtgcaacatggcaaaaccctatctctacaaaaaatataaaaattagccaggtgtggtgccatgcacctgtagtcccagctactcagggggctgaagtgaggattggttgggcctgggaggcagaggttgcagtgagccaagattgcaccactgcactacagtctgggtgacagagcaagaccctgtcttaaaaaaaaaaaaaattaaacaaatagaaaataagtagaaaaatggcagacctaaatccaaccttagtaatgattagttacaatgtaactggacaaatactc----taagacagagactgccagacctgagaggaaagcaagacccaacaatatggcatccacagagacacaatttaaacacaaagacaca----aagtatgagaaaaaatatgccatgcagacactaaccataaaaatatgctatccagacactaatcataaaaagcttcaacggagatgttaacactagatgaaagaggcttcagaacaaaatatatcagcagaaataaacaggggactttcataaaaataaaagaatcagagag---gatattacaattataaattgtgcctcaaagtgtacacaaagt----acacacacacagagcatcaaagtacatgaatcaaaaacaacagaacaaaagcaggaaattgacaatccacaattatagccggtgaattaatactgctctctcagtaactgacggaacaaccagataaaaaaataggaaaaatacagatctaaatgacaaaatcctgacccaaatggtatttatgaagcacacagttgagcactaccaagacagactgtatgtcgatctactgagaaaagattcaagcctgaaatagtatacaaaatatgttgtctgaaaacttgaaattaaattagaaaccaacaata----gataccccgaaaagcctcatatgtctgaaaaccaagtaataaactttgaaatatcctgtgagtc-----aaaaaatattcacaaggggaactggaatatatttgg----aactTGTTATAAAAATCACATTTCtggtagactaaaggtgacaacttctttcctgctcctctctctgtgagaaccaattccccttgaatcttgctcagactactgacttatttggccaacagaaggtgacaaaggtggtatctgggaacttcagaagccaggctgagagaacggaacacttatccaggagaaagccagtcaccaggcaggaaataccactcccctgagacccccatgatggaaaccacacagccagtccatgactagctccacgcattgacagcccccactgagcctccagcaacacc----------------------------------cactcccaaccactagtgagccaccctgcacaccaccccgctgtgctttcacacaatccagctcggctgctgccctgctgcaactgtgtctgtgagatgagctggccaccaagactttctaagccaaaaaac-------agaatgagttgttttaagctgccaagttttggggcttgtttcttcagaatagataactggaacaGAATACGGCAGCTGGAAATGAGCCGCTGTGGT-GGTAGAAGCTACAACATGTGCCACGACTGTGAGGCTGAGCTGTAACTGGGCCTCAAGGAGA-----CCATTCATGCaagctggaagggcatcaagactctcggtgagggcctgaaggacggtgagataatgtcattggaaactggagaaaaggcctgggagttacgtgctgagggactgtgggaaaactacggccacaacatggaaactgaaagggcactgcaccatctcagggatctgcctaaggacacatctgggaagaacgtggaaagtgctactggcctccc----ctgtcactgaataaatatgacaggagacagacatgatctaaaaaaggaggttcagttttcaaacagaatttagagaaaatataaagaaATAATTTCTTGTCTCAAAAGGCCa----------aaaaaaaaaaaagaaaa------agaaaaaaatgaaaaagaaGCCATTGAATACCCTACTGACCATAAGAAAAAGG i nomLeu3.chr24 C 0 C 0 e calJac3.chr7 35352758 1896 + 155834243 I a score=1229.000000 s hg38.chr1_KI270707v1_random 20390 4 + 32032 CAGG s panTro4.chr4_GL389940_random 41177 4 - 103824 cagg i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42326926 4 + 202140232 caga i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr24 1222699 4 + 28733288 CATA i nomLeu3.chr24 C 0 C 0 s otoGar3.GL873804 960088 4 - 1077187 tgga i otoGar3.GL873804 N 0 I 52 e calJac3.chr7 35352758 1896 + 155834243 I a score=14042.000000 s hg38.chr1_KI270707v1_random 20394 29 + 32032 GAAACTTGGTCAAAGGCAAGCCAGGCACT s panTro4.chr4_GL389940_random 41181 29 - 103824 gaaagttggtcaatggcaacccaggcact i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42326930 29 + 202140232 gaaagttggtcaacggcaacccaggcact i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr24 1222703 29 + 28733288 GAAAGTTGGTCAACGGTAACCCAGGCACT i nomLeu3.chr24 C 0 C 0 e otoGar3.GL873804 960092 52 - 1077187 I e calJac3.chr7 35352758 1896 + 155834243 I a score=2772.000000 s hg38.chr1_KI270707v1_random 20423 4 + 32032 GAAG s panTro4.chr4_GL389940_random 41210 4 - 103824 gaag i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42326959 4 + 202140232 gaag i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr24 1222732 4 + 28733288 GAAG i nomLeu3.chr24 C 0 C 0 s tarSyr2.KE941085v1 1028969 4 + 1133132 aaaa i tarSyr2.KE941085v1 N 0 I 23 e otoGar3.GL873804 960092 52 - 1077187 I e calJac3.chr7 35352758 1896 + 155834243 I a score=1882.000000 s hg38.chr1_KI270707v1_random 20427 14 + 32032 GA----------------------------------------GAAAGGACACAA s panTro4.chr4_GL389940_random 41214 54 - 103824 gaaaaagaacatggagaatgacaaaagcccagagggaggagtaaaaggacaaaa i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42326963 54 + 202140232 gaaaaagaacatggagaatgacaaaagcccagagggaggagtaaaaaggcacaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr24 1222736 17 + 28733288 GAAAAAGAACATGAAGA------------------------------------- i nomLeu3.chr24 C 0 I 38 e otoGar3.GL873804 960092 52 - 1077187 I e tarSyr2.KE941085v1 1028973 23 + 1133132 I e calJac3.chr7 35352758 1896 + 155834243 I a score=780.000000 s hg38.chr1_KI270707v1_random 20441 2 + 32032 AC s panTro4.chr4_GL389940_random 41268 2 - 103824 ac i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42327017 2 + 202140232 ac i ponAbe2.chr3 C 0 C 0 s otoGar3.GL873804 960144 2 - 1077187 gc i otoGar3.GL873804 I 52 I 1472 e tarSyr2.KE941085v1 1028973 23 + 1133132 I e calJac3.chr7 35352758 1896 + 155834243 I e nomLeu3.chr24 1222753 38 + 28733288 I a score=573.000000 s hg38.chr1_KI270707v1_random 20443 2 + 32032 AC s panTro4.chr4_GL389940_random 41270 2 - 103824 ac i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42327019 2 + 202140232 ac i ponAbe2.chr3 C 0 C 0 e otoGar3.GL873804 960146 1472 - 1077187 I e tarSyr2.KE941085v1 1028973 23 + 1133132 I e calJac3.chr7 35352758 1896 + 155834243 I e nomLeu3.chr24 1222753 38 + 28733288 I a score=780.000000 s hg38.chr1_KI270707v1_random 20445 2 + 32032 CA s panTro4.chr4_GL389940_random 41272 2 - 103824 ca i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42327021 2 + 202140232 cg i ponAbe2.chr3 C 0 C 0 s tarSyr2.KE941085v1 1028996 2 + 1133132 ca i tarSyr2.KE941085v1 I 23 N 0 e otoGar3.GL873804 960146 1472 - 1077187 I e calJac3.chr7 35352758 1896 + 155834243 I e nomLeu3.chr24 1222753 38 + 28733288 I a score=5560.000000 s hg38.chr1_KI270707v1_random 20447 21 + 32032 TTCTCAGGGACCAGGACTGGG s panTro4.chr4_GL389940_random 41274 21 - 103824 ttctcaaggaccaggactggg i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42327023 21 + 202140232 ttctcagggaccaggactgga i ponAbe2.chr3 C 0 C 0 e otoGar3.GL873804 960146 1472 - 1077187 I e calJac3.chr7 35352758 1896 + 155834243 I e nomLeu3.chr24 1222753 38 + 28733288 I a score=70215.000000 s hg38.chr1_KI270707v1_random 20468 170 + 32032 CGCCGTTCTCAGGGACCAGGACTGGGCAGTAATCACAGAACTGTAACAGGCACCCCATGGGAATGACCAACTGTTAGACGGGGCCTGCAGGGCAGCACTTCCCTCTTGCCTCCCACCAACAGCTTCTAAAGGGAAATGCCGACTGTTTTCACACCAGTCCCCTCACTGCG s panTro4.chr4_GL389940_random 41295 170 - 103824 cacagttctcagggaccaggactgggcactaatcacagaacTGTAACAGGCGTCCCATGGGAATGACCAACTGTTAGACGGGGCCTGCAGGGCAGCACTTCCCTCTTGCCTCCCACCAACAGCTTCTAAAGGGAAATGCCGACTGTTTTCACACCAGTCCCCTCACTGCG i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42327044 170 + 202140232 catcattctcagggaccaggactgggcactaatcagagaacTGCAACAGGTGCCCCATGGGAATGACCAACTGTTAGACGGTGCCTGCAGGGCAGCACCTACCTCCTGCCTCCCCCCAACCCCGTCTAAAGAGAAATGCCGACTGTTTTCACACCAGTCCCCACACTGCG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr24 1222791 142 + 28733288 CGCCGTTCTCAGGGACCAGAACTGGGCACTAATCAGATAACTGCCACAGGCGCCCCATGGGAATGACCA------------------------TGCACCTACCT--TGCCTCCCACCAACCCCGTCTAAAGGGAAATGCCGACTG--TTCACACCAGTCCCCTCACTGCG i nomLeu3.chr24 I 38 I 295 e otoGar3.GL873804 960146 1472 - 1077187 I e calJac3.chr7 35352758 1896 + 155834243 I a score=1746.000000 s hg38.chr1_KI270707v1_random 20638 3 + 32032 GCT s panTro4.chr4_GL389940_random 41465 3 - 103824 GCT i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42327214 3 + 202140232 GCT i ponAbe2.chr3 C 0 I 10 s nomLeu3.chr24 1223228 3 + 28733288 GCT i nomLeu3.chr24 I 295 C 0 e otoGar3.GL873804 960146 1472 - 1077187 I e calJac3.chr7 35352758 1896 + 155834243 I a score=9886.000000 s hg38.chr1_KI270707v1_random 20641 128 + 32032 GAGTTTGT---GGGCTCAGATGATAGGTCACCACAACCTGATTCAGTCCCCACTGTGGCTGTGTGT---------------------------------------------------------------GGGGGGTCAGATGACAGGCCACCACAATCTGATTCAGTCCACACTGTTGCTGTGTCGGGGGGGGG s panTro4.chr4_GL389940_random 41468 68 - 103824 GAGTTTGT---GGGCTCAGATGATAGGTCACAACAACCTGATTCAGTCCCCACTGTGGCTATGT---------------------------------------------------------------------------------------------------------------------------GGGGGGG i panTro4.chr4_GL389940_random C 0 C 0 s nomLeu3.chr24 1223231 194 + 28733288 GAGTGTGTGGGGGGGGCAGATGACAGGCCACCACAACCTGATTCAGTCCTCACTGTGGCTGAGTGTGTGGGGGGTGCAGATGACAGGCCACCACAACCTGATTCAGTTCCCACTGCAGCTGAGTGTGTGGGGGGGGCAGATGACAGGCCACCACAACCTGATTCAGTCCTCACTGCGGCTGAGTGTGTCGGGGG i nomLeu3.chr24 C 0 C 0 e otoGar3.GL873804 960146 1472 - 1077187 I e calJac3.chr7 35352758 1896 + 155834243 I e ponAbe2.chr3 42327217 10 + 202140232 I a score=15601.000000 s hg38.chr1_KI270707v1_random 20769 31 + 32032 GCAGATGACAGGTCACCACAACCTGATTCAG s panTro4.chr4_GL389940_random 41536 31 - 103824 TCAGATGACAGGTCACCACAACCTGATTCAG i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42327227 31 + 202140232 GCAGATGACAAGCCAGCACAACCTGATTCAG i ponAbe2.chr3 I 10 C 0 s nomLeu3.chr24 1223425 31 + 28733288 GCAGATGACAGGCCACCACAACCTGATTCAG i nomLeu3.chr24 C 0 C 0 e otoGar3.GL873804 960146 1472 - 1077187 I e calJac3.chr7 35352758 1896 + 155834243 I a score=587971.000000 s hg38.chr1_KI270707v1_random 20800 754 + 32032 TCCTCACTGCG-GCTGAGTGTGTGTG--GGTGCAGATGACAGGCCACCACAacctgattcaggattcagttgggctaccagccagtgccataaggaaaaccattctggggctcttgagaggggcaaagcataatttgcatgtagcagaaatgttaatagtttgtgaccagaggacaagctgtggtttattaaagactgctgcaggttcctactatgcttctcatcaagaggtggaatctaatcaccttccgcccttgaatcatggctggtctc----------------agtgatgagtgcgactgg-gcagtgtggcaggagagatgctctgggacttctgaggggcgatcataagaggccttacagattctgcctgggcctcttggacacgcaccctgggagaaaccagacaaacctgacta-cctgacgctgccagactggaaggaagtccgtgctggccacgaagagagggctgggtgcctgctccgtg-------------------------------------tccccagccatcagagtccttccagatgagaccaaggacatcatgaagcaaccaacccacaccgccctgtccagtgtcttgacccagaaaattgtgacatgtaaaaa-aataaattcctggtttaagccagtaaggttACTGGTACATAGTTACATCTCAGATAATTAAAACCTTGAAAAACTCATGAGAGATCACAAGTAGAACCTTGATCTGAA--ACGGCATGTAGCGATTTATATTGAGTATTAGGTTAAAAATGCAAGAATGGAGCATAGTTACTA-TTTT s panTro4.chr4_GL389940_random 41567 755 - 103824 TCCTCACTGCG-GCTGAGTGTGTGTG--GGTGCAGATGACAGGCCACCACAacctgattcaggattcagttgggctaccagccagtgccatgaggaaaaccattctggggctcttgagtggggcaaagcgtaatttgcatgtaggagaaatgttaatagtttgtggcctgaggacaaactgtggtttattaaagactgctgcaggttcctactatgcttcccatcaagaggtggaatctaatcaccttccccccttgaatcatggctggtctc----------------agtgatgagtgcgactgg-gcagtgtggcaggagagatgctctgggacttctgaggggcgatcatgagaggccttacagcttctgcctgggcctcttggacacacaccctgggagaagccagacaaacctgacta-cctgacgctgccagactgggaggAAGTCCGTGCTGGCCACGAAGAGAGGGCTGGGTGCCTGCTCCATG-------------------------------------TccccagccactagagtccttccagatgagaccaaggacatcatgaagcaaccaacccacaccaccctgtccagtgtcttgacccagaaaattgtgacatgtaaaaagaataaattcctggtttaagccagtaaggttactggtacattgttacatctcagataattaaaacCTTGAAAAACTCATGAGAGATCACAAGTAGAACCTTGATCTGAA--ACGGCATGTGGCGATTTATATTGACTATTAGGTTAAAAATGCAAGAATGGAGCATAGTTAATA-TTTT i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42327258 756 + 202140232 TTCTCACTGCG-GCTGAGTGTGTCGG--GGGGCAGATGACAGGCCACCACAacctgattcaggattcagttgggcttccagtcagtgccataaggaaaaccattctggggctcttgagaggggcaaagcatattttgcatgtgggagaaatgttagtagtttgtggccagaggacaagctgcggtttattaaagactgctgcagattcctactatgcttctcatcaagaggtggaatctaatcatcttccccccttgaatcgtggctggtctc----------------aatgatgagtacgactgg-acagtgtggtaggagagatgctctgggacttctgaggggcgatcatgagaggccttacagcttctgcctgggcctcttggacacacaccctgggagaagccagacaaacctgacta-cctgatgctgccagactgggaggaagtccgtgctggccacaaagagagggctgggtgcctgctccaca-------------------------------------tccccagccactagagtccttccagatgagaccagagacatcatgaagcagccaacccacactgccccatccagtgtcttgacccagaaaattgtgacatgtaaaaagaataaattcctggtttaagccag-aaggttactggtacactgttacatcgcagataattaaaacCTTGAAAAACTCATGAGAGATCACAAGTAGAACCTTGATCTGAAATATGGCATGTGGAGATTTATATTGAGTATTAGGTTAAAAATGCAAGAATGGAGCATAATTAATA-TTTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr24 1223456 811 + 28733288 TCCTCACTGAG-GCTGAGCGTGTGGG--GAGGCAGATGACAGGACACCACAacctgatgcaggattcagttgggcttccagacagtgccataaggaaaagcattctggggctcttgagaggggcaaagcatattttgcatgtgggagaaatgttagtagtttgtggccagaggACAAGCtgtggtttatgaaagactgctgcagattcctactacgcttctcatcaagaggtggaatctaatcaccttccccccttgaatcatggctggtctcagggatgagtatgactagtgatgagtacgactgg-acagtgtggcaggagagatgctctgggacttctgaggggcgatcatgagaggccttacagcttctgcctgggcctcttggacacacaccctgggagaagccagacaaagctgacta-cctgacgctgccagactgggaggaagtccatgctggccacaaagagagggctgggtgcctgctccacgtccccagccactagtccttctgggtgcctgctccacatccccagccactagagtccttccagatgagaccagagacatcatgaagcagccaacccacactgccctgtccagtgtcttgacccagaaaattgtgacatgtaaaaagaataaattcctggtttaagccagtaaggttactggtacgttgttacatcgcagataattaaaacCTTGAAAAACTCATGAGAGATCACAAGTAGAACCTTGATCTGAAACCTGGCATGTGGAGATTTATATTGAATATTAGATTAAAAATGCAAGAATGGAGCATAGTTAATATTTTT i nomLeu3.chr24 C 0 C 0 s calJac3.chr7 35354654 739 + 155834243 tcctcactgtgcactgggtgtgtgtggaggggcagataacAGGCCACCAAACCC--------AATCTGGTtgggctttcagctagcgccataaggaaaacagttctggggctcttgagaggggcaaagtatattttgcatgtgggagaaatgttaatagtttgtgaccagagggcaagctgtggtttattaaagactgctgcagattcttactattcttcttatcaaaaggtggaatctaatcacctt-cgcccttgaattgtggctgctctc----------------agtgaagagtatgactaatacagtgtggcaggagagatgctctcggacttctgaggggcgataatgagaagccttacagcttctgcctgggcctcctgaacacacaccctgggagaagccagacaaatctgactaccctgacactgctaggctgggaggAAGTATGTGCTGGCCACAAAGAGAGGGCTGGGTGCCTGCTCCATG-------------------------------------Tcccctgccact-gagtccatccagctgagaccagagacatcatgaagctgccaacccacactgccctgtccagcgtcatgacccagaaaatTGTAACATGTAAAAAGAATAAATTTCTAGTTTAAGCCAGTAACGTTACTGGTACATAG--------CAGATAATTAAAACCTTGAAAAACTCATGAGAGATCCCAAGTAGTACCCTGATTTGAAATATGGAATGTGGAGATTTGTAT----TATTAGGCTAAAAAGGCAAGAAT-GAGCATATTTCATA-CTTT i calJac3.chr7 I 1896 C 0 e otoGar3.GL873804 960146 1472 - 1077187 I a score=211466.000000 s hg38.chr1_KI270707v1_random 21554 236 + 32032 ACGTTAAAGCTAAAACTATAATTGCCTACTTAAAATTTTCAGTTAATTAGGTTGTCACTTTTTGTTCTTAACCAAGAAATCAACT---------AGTTTTAGTCCATAAAC--AGTTAGAACTGATGCACACATCCGTTTCTCCTTACTTATTTT-AAACAGCTATCTGAAATAGGA----AGTGTAATATAATCTTT-AAAGAATCTGAAAACATGACAGAAATGTTTAAACTATAAACAtat-attgtatat s panTro4.chr4_GL389940_random 42322 236 - 103824 ATGTTAAAGCTAAAATTATAATTGCCTACTTAAAATTTTCAGTTAATTAGGTTGTCACTTTTTGTTCTTAACCAAGAAATCAACT---------AGTTTTAGTCCATAAAG--AGTTAGAACTGATGCACACATCCGTTTCTCCTTACTCACTTT-AAACAGCTATCTGAAATAGGA----AGTGTAATATAATCTTT-AAAGAATCTGAAAACATGACAGAAATGTTTAAACTATAAACATAT-ATTGTATAT i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42328014 234 + 202140232 ATGTTAAAGCTAAAACCATAATTGTCTACTTAAAATTTTCAGTTAATTAGGTTGTCACTTTTTGTTCTTAACCAAGAAATCAACTA-------GAGTTTTAGTCCATAAAC------AGAACTGATGCACACATCCATTTTTCCTTACTCATTTT-AAGCGGCTATCTGAAATAGGA----AGTGTAATATAATCTTT-AAAGAATCTGAAAACATGACAGAAATGTTTAAACCACAAACATAT-ATTGTATAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr24 1224267 232 + 28733288 ACGTTAAAGCTAAAACTATAATTGCCTACTTAAAATTTTCAGTTAATTAGGTTGTCACTTTTTGCTCTTAACCAAGAAATCAACT---------AGTTTTAGTCCATAAAC------AGAACTGATGCACACATCCGTTTTTCCTTACTCATTTT-AAGCGGCTATCTGAAATAGGA----AGCGTAATATAATCTTT-AAAGAACCTGAAAACATGACAGAAATGTTTAAACTACAAACATAT-ATTGTATAT i nomLeu3.chr24 C 0 C 0 s calJac3.chr7 35355393 233 + 155834243 ATATTAGAGCTAAAACTATAA----CTATTTAAAATTTTCCATTAATGAGGTGGTCA-TTTTTGTTC-------AGAAATCAACTACTAACTGCAGTTTGAGTCCATAAACACATTTATAAGTGATGCACACATCCATTTTTCCTTACTCATTTTCAAATGGCTGTCTGAAATAGGA----AAC--AATATAATCTTTAAAAGAACCTGAAAACATGACAGGAATTTTTAAACTATAAAC--AT-ATTATATGT i calJac3.chr7 C 0 C 0 s micMur1.scaffold_743 223360 224 + 461074 ATGTTAGATCTCAAACTATAACTGTGAATTTAAAATGTTCAGTTACTTTGGTTGTTACTTATTAC-----------------------------AGTTCTAATCCATAAACATAGTTATGACTAATACATATGTCTACTT-TCCTTACTAATTTTTAAGTGGTTACCTGAAATAGGAGAAGAATTAAATATAATCTTTAAAGGAGTTTGAAAACATGACAGGTATTTTTGAACTACAAACATACAATTGTATAT i micMur1.scaffold_743 N 0 I 294 e otoGar3.GL873804 960146 1472 - 1077187 I a score=25160.000000 s hg38.chr1_KI270707v1_random 21790 31 + 32032 gttagcatattgtatacattgaatattAACA s panTro4.chr4_GL389940_random 42558 31 - 103824 GTTAGCATATTGTATACATTGCATATTAACA i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42328248 31 + 202140232 GTTAGCATATTGTATACATTGCATATTAACA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr24 1224499 31 + 28733288 GCTAGCATATTGTATACATTGCATATTAACA i nomLeu3.chr24 C 0 C 0 s calJac3.chr7 35355626 31 + 155834243 GTTAGTATATTATACACATTGTATATCAACA i calJac3.chr7 C 0 C 0 e otoGar3.GL873804 960146 1472 - 1077187 I e micMur1.scaffold_743 223584 294 + 461074 I a score=26316.000000 s hg38.chr1_KI270707v1_random 21821 32 + 32032 TAAGC----TAGAATCATTGACATAAATTTATATAA s panTro4.chr4_GL389940_random 42589 32 - 103824 TAAGC----TAGAATCATTGACATAAATTTATATAA i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42328279 36 + 202140232 TAAGCTAGATAGAATCACTGACATAAATTTATATAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr24 1224530 30 + 28733288 TAAAC----TAGAATCATTGAC--AAATTTATATAA i nomLeu3.chr24 C 0 C 0 s calJac3.chr7 35355657 36 + 155834243 TAAACTAGATAGAATCATTGACATAAGTTTATATAA i calJac3.chr7 C 0 C 0 s micMur1.scaffold_743 223878 29 + 461074 tgagctaGGCTGAATCACTGACATAAATT------- i micMur1.scaffold_743 I 294 C 0 e otoGar3.GL873804 960146 1472 - 1077187 I a score=4137.000000 s hg38.chr1_KI270707v1_random 21853 10 + 32032 ACAAAA----GGTG s panTro4.chr4_GL389940_random 42621 10 - 103824 ACAAAA----GGTA i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42328315 10 + 202140232 ACAAAA----GGTA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr24 1224560 10 + 28733288 ACAAAA----GGTA i nomLeu3.chr24 C 0 C 0 s calJac3.chr7 35355693 10 + 155834243 ATGAAA----GGTA i calJac3.chr7 C 0 C 0 s micMur1.scaffold_743 223907 6 + 461074 ACGAAA-------- i micMur1.scaffold_743 C 0 C 0 s otoGar3.GL873804 961618 10 - 1077187 ataaaacttt---- i otoGar3.GL873804 I 1472 I 13 a score=6428.000000 s hg38.chr1_KI270707v1_random 21863 12 + 32032 TAACATATGACA s panTro4.chr4_GL389940_random 42631 12 - 103824 TAAAATATGACA i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42328325 12 + 202140232 CAAAATATGACA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr24 1224570 12 + 28733288 GAAAATACGACA i nomLeu3.chr24 C 0 C 0 s calJac3.chr7 35355703 12 + 155834243 GAAAATATGACA i calJac3.chr7 C 0 C 0 s micMur1.scaffold_743 223913 5 + 461074 ----ATCTG--- i micMur1.scaffold_743 C 0 C 0 e otoGar3.GL873804 961628 13 - 1077187 I a score=7346.000000 s hg38.chr1_KI270707v1_random 21875 10 + 32032 ATGTTCTTCT s panTro4.chr4_GL389940_random 42643 10 - 103824 ATGTTCTTCT i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42328337 10 + 202140232 ATTTGCTTCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr24 1224582 10 + 28733288 ATGtgcttct i nomLeu3.chr24 C 0 C 0 s calJac3.chr7 35355715 10 + 155834243 ATGTGCTTGT i calJac3.chr7 C 0 C 0 s micMur1.scaffold_743 223918 9 + 461074 -TGCTGCTTC i micMur1.scaffold_743 C 0 I 1 s otoGar3.GL873804 961641 10 - 1077187 atatagtttt i otoGar3.GL873804 I 13 I 278 a score=269647.000000 s hg38.chr1_KI270707v1_random 21885 281 + 32032 TGATTTTTGTCTTTGCATATTTCTTTATTGGCCCTTGT-CAAATGTGACCCACTAACTCCTGAATACTTTCTC-CCTCCCCATTGATTCCTAAGGATGTCACCACA-GTGTTGGCCAGATGCACAGGTCACAGGGGACTGAATCTCATCACCCCACAAACATACCATTCAGGTTTTGCCAAGAATGACACTGTAAATGTAACAAAGCTTCCGTGCTTGTTAGTGAACGCCAACT-------CAGCTCCTCTC------------CTGTATTCAGAAATCAGGATGAGATGAAAACAACAAGCA s panTro4.chr4_GL389940_random 42653 281 - 103824 TGATTTTTGTCTTAGCATATTTCTTTATTGGCCCTTGT-CAAATGTGACCCACTAACTCCTGAATGCTTTCTC-TCTCCCCATTGATTCCTAAGGATGTGACCACA-GTGTTGGCCAGATGCACAGGTCACAGGGGACTGAATCTCATCACCCCACAAACATACCATTCAGGTTTTGCCAAGAATGACACTGTAAATGTAACAAAGCTTCCGTGCTTGTTAGTGAACACCAACT-------CAGCTCCTCTC------------CTGTATTCAGAAATCAGGATGAGATGAAAACAACAAGCA i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42328347 281 + 202140232 TG-TTTTTGTCCTTACATATTTCTTTATTGGCCCTTGT-CAAACATGTCCCACTAACTCCTGAATGCTTTCGC-TCTCCCCATGGATTCCTAAGGATGTCACCACACATGCTGGCCAGATGCACAGGTCACAGAGGACTGAACCTCATCACCCCACAAACACACCCTTCAGGTTTTGCCAAGAATGACAACGTGAATGTAACAAAGCTCCTGTGCTTGTTAGTGAACACCAACT-------CAGCTACTCTC------------CTGTATTTGAACATCAGGATGAAATGAAAAGAACAAGCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr24 1224592 281 + 28733288 tgctttttgtctttgcatatttctttattgGCCCTTGT-CAAACGTGTCCCACTAACTCCTGAATGCTTTCTC-TCTCCCCATGGATTCCTAAGGATGTCCCCACA-GTGCTGGCCAGATGCACAAGTCACAGGGGACTGAACCTCATTACCCCACAAACACACCCTTCAGGTTTTGCCAAGAATGACACTGTAAATGTAACAAAGCTTCTATGCTTGTTAGTGAACACCAACT-------CAGCTCCTCTC------------CTGTATTTGGATATCAGGATGAGATGAAAACAATAAGCA i nomLeu3.chr24 C 0 C 0 s calJac3.chr7 35355725 290 + 155834243 ---TTTTTGTCTTTGCATATTTTTTTATTGACCCTTGT-CAAACATGTCCCACTAACTCCTGAATGCTTTCTCTTTTCCCCATGGATCCCTAAGGATGTCAGCACATGTGCTGGCTAGACGCACAGCTTGCAAGGGATTGAACCTCATTACCCTGCAAACACACCCTTCAGGTCTTGCCAAGAATGACAATGTAAATGTAACAAAGCTTCTGTGCTTATAAGTGAGCACCAACT-------GAGCTCCTCCCCTGA--CTGGCACTGTATTCACACATTGAGATGAAATGAAAAGAAAAAGCA i calJac3.chr7 C 0 C 0 s micMur1.scaffold_743 223928 289 + 461074 ---TGCTATTCTTTGTATATCT-TTTATTGACCCCTATCCAAACACGTTCCACTAGCTCCGAAATGCTTTCCC------CTGTGGAATCCTAAGGATGTCAACATATGTGCTGGCTAGAAGCACAGTTCACCAGGGACTGAACTACTTCACCCTACAA----AACCTTTAGGTTTTGCCAAGAATGACATTTCTGATGTAATAAAGTTACCATGTTTGTTTGTGAGCGCCCACTCACAAAACAGCTTCTCCCCCTATGTTGGCACGGTATACAGACATGCGAATAACACAAAAAGAACAAACA i micMur1.scaffold_743 I 1 I 9 e otoGar3.GL873804 961651 278 - 1077187 I a score=210448.000000 s hg38.chr1_KI270707v1_random 22166 275 + 32032 ggccagtcacagtggctcacgcctgtaatcccagcactttgggaggacgaggcaggtggatcacctgaggtcgggagttcgagaccaccctgatcaaaacagagaaaccccatctctactaaacatacaaaatcagccgggcatggtggcaaatgcctgtaataccagctactcagg-agctgaggcaggagaatttcttgaacccgggaggtggaggctgcagggagccgagatcacaccactgtcctctagcctggacaacaagagtgaaactc s panTro4.chr4_GL389940_random 42934 275 - 103824 ggccaggcacagtggctcacgctagtaatcccagcactttgggaggacgaggcaggtggatcacctgaggtcgggagttcgagaccaccctgatcaaaacagagaaaccccatctctactaaacatacaaaattagccgggcatggtggcaaatgcctgtaataccagctattcagg-agctgaggcaggagaattgcttgaacccgggaggtggaggctgcagtgagccgagatcacaccactgcactctagcctggacaacaagagtgaaactc i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42328628 276 + 202140232 ggccgggcacagtggttcatgcctgtaatcccagcactttgggaagctgaggcggggagatcacctgaggtcgggagttcgagaccaccctgaccaacacggagaaaccccatctctactaaaaatacaaaattagccaggcgtggtggcacatgcctgtaatcccagctactcaggaagctgaggcaggagaatcgcttgaacccaggaagcggaggctgcggtgagctgagatcgcaccactgcattccagcctgggcaacgagagcgcaactc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr24 1224873 276 + 28733288 ggccaggcacggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcacctgaggtcaggaattcgagaccaccctgatcaacaaggagaaatcccatctctactaaaaatacaaaattaaccaggcatggtggcacatgcctgtaataccagctactcaggaggctgaggcaggagaattgcttgaatctgggaggcggaggctgcagcgagccgagattgcaccactgcgctccagcctgggcaacaagagcaaaattc i nomLeu3.chr24 C 0 C 0 s calJac3.chr7 35356015 276 + 155834243 ggccgggcacagtgactcacacctgtaatcccagcactttgggaggccaaggcgggtaaatcacctgaggtcgggagtttgagatcagcctgatcaacatggagaaaccctgtttttactaaaaatacaaaatcagctgggcacggtggcgcatgcctgtaattccagctattcgggaggctgagggaggagaactgcttgaacccaggaggtggaggctgcagtgagccaagatcgcgccattgcagtccaggctgggtgacaagagcgaaaccc i calJac3.chr7 C 0 C 0 e otoGar3.GL873804 961651 278 - 1077187 I e micMur1.scaffold_743 224217 9 + 461074 I a score=11305.000000 s hg38.chr1_KI270707v1_random 22441 10 + 32032 tgtctcaaaa s panTro4.chr4_GL389940_random 43209 10 - 103824 tgtctcaaaa i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42328904 10 + 202140232 tgtctcaaaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr24 1225149 10 + 28733288 tgtctcaaaa i nomLeu3.chr24 C 0 C 0 s calJac3.chr7 35356291 10 + 155834243 tgtctcaaaa i calJac3.chr7 C 0 C 0 s otoGar3.GL873804 961929 10 - 1077187 TGTTACAACA i otoGar3.GL873804 I 278 N 0 e micMur1.scaffold_743 224217 9 + 461074 I a score=24907.000000 s hg38.chr1_KI270707v1_random 22451 48 + 32032 gaaaaa-aaattaaaaataaaagaaCAAGG--AAACAAAAGTAACAAGGCT s panTro4.chr4_GL389940_random 43219 47 - 103824 gaaaaa-aa---aaataaaaaagaacaaGGAAAAAAAAAAGTAACAAGGCT i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42328914 48 + 202140232 gaaaaa-aaattaaaaataaaagaaCAAGC--AAACAAAAGTAACAGGACT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr24 1225159 49 + 28733288 gaaaaataaaataaaaattaaagaaCAAGC--AAACAAAAGTAACAGGACT i nomLeu3.chr24 C 0 C 0 s calJac3.chr7 35356301 47 + 155834243 aaaaac-aaaa-acaaaataaagaaCAAGC--AAACAAAAGTAACAGTTCT i calJac3.chr7 C 0 C 0 e micMur1.scaffold_743 224217 9 + 461074 I a score=357014.000000 s hg38.chr1_KI270707v1_random 22499 380 + 32032 TGACACCAGATGAGCCTGAATCTAAGCAAGAAAAG---CCCAGAAGAAATCCCAT--------TTTGGGTCACTGGCTGCATGGTAGTAATACCATACACATAAAGGAAGAGAAGAGGATGTGGCTTTCACTTTGAATTTTTTGAGCTTAAGGTAAATTTTGTGTA------------------------------------------------------------------------------------------------GCTACAAAGA----------------AGCATTCAACAGAGAGTTAAACCTATGATGGAAAGACT---GAAGGGGTCCAAGCTGTAGAGAAACAGGACTG-CAAACCACAAAGGGCTGAATCAGTCAAGGAGAACTGCAGGGCGGGATGAACAGGGACTAA--TGGAACATTTGGATAAGCTGTTGAGAAGAAAGGAGAATTCAGAGAAAAA-GAACTGTCAGTGAGGTCATAATAGGAACtgttacag s panTro4.chr4_GL389940_random 43266 380 - 103824 TGACACCAGATGAGCCTGAATGTAAGCAAGAAAAG---CCCAGAAGAAATCCCAT--------TTTGGGTCACTGGCTGCATGGTAGTAATACCATACACATAAGGGAAGAGAGGAGGATGTGGCTTTCACTTTGAATTTTTTGAGCTTAAGGTAACTTTTGCGTA------------------------------------------------------------------------------------------------GCTACAAAGA----------------AGCATTCAACAGAGAGTTAAACCTATGATGGAAAGACT---GAAGGGGTCCAAGCTGTAGAGAAACAGGACTG-CAAACCACAAAGGTCTGAATCAGTCAAGGAGAACAGCAGGGCGGGATGAACAGGGACTAA--TGGAACATTTGGATAAGCTGTTGAGAAGAAAGGAGAATTCAGAGAAAAA-GAACTGTCAGTGAGGTCATAATAGGAACtgttacag i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42328962 381 + 202140232 TGACACCAGATTAGCCTGGATCTAAGCAAGAAAAG---CCCAGAAGAAATCCTAT--------TTTGGGTCACTGGCTGCAAAGTAGTAATACCATACAAATAAGGGAAGAgaggaggatgtggctttcactttgaattttttgagtttaaggtaacttttggata------------------------------------------------------------------------------------------------gctacaaaga----------------agcattcaacagacagttaaacctacgatggaaagact---gaagaggtccaagctgtagaGAAACAGGACTG-CAAACCACAAAGGGCTGAATCAGTCAAGGAGAACTGCAGGGTGGGATGAACAGGGACCGA--TGGAACATTTGGATAAGCTGTTGAGAAGAAAGGAGAATTCAGAGAAAAAGGAACTGTCAGTCAGGTCATAATAGGAACtgttacag i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr24 1225208 380 + 28733288 TGACACCAGATGAGCCTGGATTTAAGCAAGAAAAG---CCCAGAAGAAATCCCAT--------TTTGGTTCACTGGCTGCACAGTAGTAATGCCATACACATAAGGAAAAAGAGGAGGATGTGGCTTTCACTTTGAATTTTTTGAGCTTAAGGTAACTTTTGGATA------------------------------------------------------------------------------------------------GCTACAAAGA----------------AGCATTCAACAGAGAGTTAAACCTATGATGGAAAGACT---GAAGAGGTCCAAGCTGTAGAGAAACAGGACTG-CAAACTACAAAGGGCTGAATCAGTCAAAGAGAACTGCAGGGCGGGATGAACAGGGACCGA--CGGAACATTTGGATAAGCTGTTGAGAAGAAAGGAGAATTCAGAGAAAAA-GAACTGTCAGTGAGGTCATAATAGGAACtgttacag i nomLeu3.chr24 C 0 C 0 s calJac3.chr7 35356348 378 + 155834243 TGACACCAGATGAGGCTGAATCTAAGCAAGAAAAG---TCCAGAAGAAACCCCATTTTAGTGGTTTGAATCACTGGCTGGATGGTAGTAATACCATACACATAAGGGAAGAGAGGAGAATGTGGCTTTCACTTTGGATGTTTTGAGCTTAAGGTAACTTTTGGATA------------------------------------------------------------------------------------------------GCTACAAAG------------------------------CAGTTAAACATATGATCAAAGGACTGAGGAAGAGGTCCTAGCTGCAGAGAAATGGGACTGCCAGACCATGAAGGGCTGAATCAGTCAAGGAAAACTGCAGAGTCGGATGAACAGGGACTGA--TGGAACATTTGGGTAAGTTGTTGAGAAG-TAGAATAATTCAGAGAAAAGGGAACTGTCAGTGAGGTCACAAGAGGAACtattaaag i calJac3.chr7 C 0 C 0 s micMur1.scaffold_743 224226 501 + 461074 TGACACCAGATGAGATTAGATGTAAGAAAGAGAAAGATTCCATGAGAAATTCCATTTTAGGGCTTTGGGTCACTGGTTATATGGCAATAATACCATAT--ATAAGGGAAGAATGAAGAATGTGGTTTTCATTTTGGATTCACTGACTTTGAGGTGACTTTTAAAAAATTAGTAATTTtacggaacacttcaagaatttgcatgtcatccttgtgcaggggccatgctaatcttccctgtatcggtccaattttagtatatgtgctacggaggcgagcacTGAGGCGCCAGCAGTCAACAGGGAGTCGACCCTATGGCCTAAAGGCTGGGGAAGAGGTCAAAGCTGGAGAG-AACAGGACTGCCCAACCACAGAGGGCTGAATGGGTCGAGGAGAACCGTAGAGCAGGATGTATGGGAAATGGCTTGGAACACTTAGATGAGCTAT-----GGTAAGGAGAAGTAGAAGAGGAG-AATCCATCACTGAGTTCATGATAAAGACTAACACAG i micMur1.scaffold_743 I 9 N 0 a score=2076290.000000 s hg38.chr1_KI270707v1_random 22879 2768 + 32032 tgaactaaatatggcctgggaaggactctgtacttctagatttgagtccctgtggacaaactgcaacctaacttaataggtagaaagactgaaaacctaacttaggagtatccgcctgtaactatagctgagtcctggccaatcccagctgccaaacttctgccactcacacactgctgagtgttcag-ctgtgttcaaataaggcaaatgctgagcactgtaaccagtccagttgtttctggacctcactgctgagaacag-taagggacccagttgcttctggacctcact---------------------------------------------------------------------------tctcacttcagatttctgtacatcacgttccc-tttattgtctataaatcttccaccatgtagctgtgctggagtctcaccaaatctgctgtgattctgggggctgcctgattcgtgaatcattcattgctcaattaagttcctttaaatttaattcagctgaagattttcttttaataGATGGTGTCAGAAGTGGGATCTGTGGGAGCAGGACTGCTAGGGCCTCCGGAGCTATAGTGTGGTGAGCAGTGTTGCTAGGGCTTCTAATGACCCCCAGGAGTGCTGAG-GTACAAGAAAGGCACCTGCAAGGACTGCTCTGtgatggcagcagtggtccacatggagcagttgctacggagacactggctgcagtggggaggagtggctggggctgtgcactcctcgaagctggtgggagccaggaaccggtgggagccccaccctttctaaattggcaagcaggagccccgccctcccaggcacagctgcagccatccagccatgactgcaaacccgggcatctttgcactcttagaggcccagcaag-ccccctgcccccacaggctcagtcgtacctggtcccaccacctggcatctctccactcccagagcccactccaacttcggatccaagttgaggctgaacccaggcacagtcgcaacccggcccggtttgtgcaagctcagggcagtgctgacgtgccagccccctgccacctccgc--cccctccagactttcggcagtgacgagcacaagagggaggttgaggtgggtctaagagtggctcagcactggcctgaaggcactcctcagctcgaacagcctCAGCAATGTGGGCACagctaaccacagtgcgtct-ctctcagctgctgagagctgaacagacgttgggatgacctgccaacagaaaggagttacccactgcagttctcctctgagctgtactgttgctcaataaagcacctcttcaccttgctcaccttctatttgcccacatacctcattcttcctggactcaggaaaagaactcgggacctgccaactagcagggctgaaagaggtgtaacgtaaacagg-------gctgaaacgcaccctttccttgccaaattgcaggcaagaagaagagaagagagaaggagataagagctgtggcccttcagggagcccagacctaggagctccccaagccagggctgtgatgccttctttggggctctgcagttcct-gcatctccaagtttccaggcaccactgcatttcctgatacacacagtggaagctgtttgcagtcggtctggtccagctgcaacctcacagggagctggcacttgtgccggtacctggagctgcccactccactgcagctggcatgcttggctgtgtgcagtggccagatcccatgcttgcttgctcacacacccttcactgctctgtacccagctcatccttggcaggtgtgggatccacaccactagcatgagccgagtggacagaacgaacccagtgggcccgagcaaaacacaggtaaaggcaccaccagc--cagaggtttcaggcag-aaaagtgatgtctcaggattctgtaacacttgtgcactttgacctctcagagcagctggggatcatggtaaattctctctcggatttcatagctccatggatttgtgttttgagctc---tgagtttccttgagcaattttctgttccaaactgctatccagccatgactgactggatgttttagaagttatgacagaaacgggacagggcccaggatcagatttgatccagtagttaactggcttgaatccagttccagttagagacctcctacatctgaatgggtcagaaggaaagtggtagtaaatgataattttgga-gggttgtaaaatttggcttttgaaaattcacagggatttttgtgttctacccctttgtttcattttcctcgcacgcttaggtagga--aaaaaaatcattggctaagtcaatcaagggaacctgggagtaaagacaatatattaggtaacaataggatcattaatttctggaaaacttagttccttctggctaattcattaggcctgggaagcagcaaagtcttacagaaatggcaaaatctttctaaagataacttacagtggaacattccaaatgaataatgccctgaagtgcatttaaaaatgagggctcccaaattagtctcatctagggatgcctattaatatgcagaagcttctaaaaagatttagaggtggcacggcctatctgggagcaagtttgggtcttaccagtttgacactgggtgctaagcaaagtggcacg----tgtc-tatgttttgtcacacgtattttgctctgaacagaatgaaaaatgttaatttggttactccaagcaaccccttgggcagcatcttacaaagctgagtggattcttcctgtggctccatga-ttatcattgtgatgcagctt-tgccccagagctataatatggt s panTro4.chr4_GL389940_random 43646 2768 - 103824 tgaactaaatatggcctgggaaggactctgtacttctagatttgagttcctgtggacaaactgcaacctaacttaataggtagaaagactgaaaacctaacttaggagtatgtgcctgtaactatagctgagtcctggccaatcccaacagccaaacttctgccactcacacactgctgagtgttcag-ctgtgttcaaataaggcaaatgctgatcactgtaaccagtccagttgtttctggacctcactgctgagaacag-taagggacccagttgcttctggacctcact---------------------------------------------------------------------------cctcacttcagatttctgtacatcatgttccc-tttattgtctataaatcttccaccatgtagctgtgctggagtctcaccaaatctgctgtgattctgggggctgcctgattcgtgaatcattcattgctcaattaagttcctttaaatttaattcagctgaagattttcttttaCTAGATGGAGTCAGAAGTGGGATCTGTGGGAGCAGGACTGCTAGGGCCTCCGGAGCTATAGTGTGGTGGGCAGTGTTGCtagggcttctaatgacccccaggagtgctgag-gtacaagaaagacacctgcAAGGACTGCTCTGtgatggcagcagtggcccacgtggagcagttgctacggagacactggctgcagtggggaggagtggctggggctgtgcgctcctcgaagctggtgggagccaggaacgggtgggagccccaccccttctaaattggcaggcaggagccccgccctcccaggcacagctgcagccatccagccatgactgcaaacccgggcatctttgcactctcagaggcccagcaagcccccctgcccccgcaggctcagttgtacctggtcccaccacctggcatctctccactcccagagcccactccaacttcggatccaagttgaggctgaacccaggcacagtcgcaacctggcctggtttgtgcaagctcagggcagtgctgacatgccagccccctgccacctcggc--cccctccagactttgggcagtgacgagcacaagagggaggttgaggtggggctaagagtggctcagcactggcctgaaggcactcctcagctcgaacagccttggCAATGTGGGCACagctaaccacagtgcgtct-ctctcagctgctgagagctgaacagacgttgggatgacctgcctgcagaaaggagttacccactgcagtt---ctctgagctgtactgttgctcaataaagcacctcttcactttgctcaccttctacttgcccacatacctcattcttcctggactcaggagaagaactcgggacctgccaactagcagggctgaaagaggtgtaacataaacaga-------gctgaaacgccccctttgcttgccaaattgcaggcaagaagaagagaagagagaaggagacaagagctgtggcccttcagggagcccagacctaggagctccccaagccaggcctgtgatgccttctttggggctctgcagttcct-gcatctccaagtttccgggcgccactgcattccctgatacccacagtggaagctgtttgcagtcggtctggtccagctgcagcctcacagggagctggcacctgtgccggtacctggagctgcccactccactgcagctggcatgcttggctgtgtgcagtggccagatcccatgcttgcttgctcacacacccctcactgctctgtacccagctcacccttggcaggtgtgagatccacaacactagcatgagccgagtggacagaacgaacccagtgggcccgagcaaaacacaggtaaaggcaccaccagc--cagaggtttcaggcag-aaaagtgacgtctcaggattctgtaacacttgtgccctttgatctctcagagcagctggggatcatggtaaattctctctcggatttcagagctccatggatttgtgttttgagctc---tgagtttctttgagcaaatttctgttccaaactgctatccagccatgactggctggatgttttagaagttatgacacaaacgggactgggtccgggatcagatttcatccagtagttaactggcttgaatccagttccagttacagacctcctacatctgaatgggtcagaaggaaagtggtagtaaatgataattttgga-gggttgtaaaatttggcttttgaaaattcacagggatttttgtgttttacccctttgtttcattttcctcgcacgcttaggtaggaataaaaaaatcattggctaagtcaatcaagggaacctgggagtaaagccaatatattaggtaaaaatagaatccttaatttctggaaaacttagttccttctggctaattcattaggcctgggaagcagcaaagtcttacagaaatggcaagatcttactaaagataacctacagtggaacattccaaatgaataatgccctgaagtgcatttaaaaatgagggcttccaaattagtctcatctagggatgcctattaatatgcagaagcttctaaaaagatttagaggtggcacggcctatctgggagcaagtttgggtcttaccagtttgacactgggtgctaagcaaagtggctcg----tgtc-tacgttttgtcacatgtattttgctctgagcagaatgaaaaatgttaatttggttactccaagcaactccttgggcagcatcttgcaaagctgagtggattcttcctgtggctccatga-tttccattgtgatgcagctt-ggccccagagctataatatggt i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42329343 2811 + 202140232 tgaactaaatatggcctgggaaggactctgtacttctagatttgagtccctgtggacaaactgcaacctaacttaataggtagaaatactgaaaacctaacttaggagtatgcacctgtaacaatagctgagtcctggccaatcccaacagccaaacttctgccactcacacactgctgagtgttcag-ctgtgttc-aataaggcaaatgctgagaactataaccagtccagttgtttctggacctcactgctgagcactg-taacagacccagttgcttctggacctcactgctgagaactgtagccagtccagttgtttctggacctcactgctgagaactgtaacgaacccagttgtttctggacctcacttcagatttctgtacatcacgttccc-tttattgtctataaatcttccaccatgtggctgtgctggagtctcacagcatctgctgtgattctgggggctgcctgattcgtgaatcattcattgctcaattaagctcctttaaatttaatttggctgaaga-----ttttattAAATGGTGTCAGAAGTGGGATCTGTGGGAGCAGGACTGCTAGGGCCTCCGGAGCTATAGTGTGGCGAGCAGGGTTGCTAGGGCTTCTAATAACCCCCAAGAGTGCTGAG-GTACAAGCAAGGCACCTGCAAGGACCCCTTTGtgatggcagcagtggcccacgtggagcagtcgctaaggagacactggttgcagtggggaggagtggctggggctgtgcgctcctcaaagctggtgggagccaggaacgggtgggagccccgccccttctaaattggcaggcaggagccccgccctcccaggcacagcggcagccgtccagccatgactgcagacccgggcatctctgcactgtcagaggcccagcaagcccccctgcccctgccggctcagacgtacctggtcccgtcacctggcgtctccctgctcccagagcccactccaactttggatcaaagttgaggccgaacccaggcgctgtcgcaacccagccgggtatgtgcaagctcagggcagtgctgacctgccagctccctgccacctcggc--cccctccagactttgggcactgacaagtacaggagggaggttgaggtggggctaagggtggctcagcactggcctgcaggcgcccctcagctcaaacagcctgggcgctgtgggcactgTTACCCAGCATTggtctcctctcagctgctgagagctgaacagacatcaggatgacctgcctgtagaaaggagctacccactgcaggtctcctctgagctgtactgttgctcaataaagcacctcttcaccttgctcaccttctacttgcccacatacctcattcttcctggacacaggacaagaactcaggacccgccaaccagcagggttgaaagaggtgtaacataaacagggccccttgctgaaacacgccccttgtttgccaaattgcaggcaagaaggagag---------------aagagctgtggcccttcagggagcccagacctaggagctccccaagccagggctgtgacatcttctttggggctctgcagttcct-gcatctccaagcttccaggcgccactgcattccctgataatcgcagtggaagctgtttgcagtctgcctggtccagctgcagcctcacagggagctggcacctgtgccggtgcctggagctgcccaccccaccacagctagcatgcttggctgtgtgcagtggccagatcccacactcgcttgctcacacaaccctcacttctctgagcccagctcacccttggcaggtgtgggatccagaccattagcatgagccgagtggacagaacgaacccagtgggcccgagcaaaacacaggtaaaggcgccaccagc--cagaggtttcaggcag-aaaagtgacaccccaggattctgtaacacttgtgccctttgacttctcggagcagatggggaccatggtaaattctctctcagatttcagagctccatggatttgtgttttgagctc---tgagtttctttgagcaaatttctgttccaaactg------------------------ggtttagaagttatgacagaaacgggacccagtccaggatcagatctgatccagtagttaactggcttgaatccagttccagttagaggcctcctacatctgactgggtaagaatggaagtggtagtaaatgataatattggaggggttgtaaaatttggcttttgaaaattcacagagatttttgtgttctacccctttgtttcatttttctcacacacttaggtaggaa-aaaaaaatcattggctaagttaatcaagggaacctaagagcaaagccaatattttaggtaaaaataggatccttaatttctggaaaactaagttccttctggctaatacattaggcctgggaagcagcaaagtcttacagaaatggcaaaatcttactaaagataacttacagtggaacattccaaatgaataatgccctgaagtgcatttaaaaatgagggctcccaaattagtctcatctagggatgcctattaatatgcagaagcttctaaaaagatttagagatggctcagcccatctgggagcaagtttgagtcttaccagtttgatactgggtgctaagcaaagtggctca----tgtc-tatgttttgtcacatgtattttgctctgggcagaatgaaaaatgttaatttggttactgcaagcaaccccttgggcagcaccgtgcaaagctgagtggattcttcctgtggttccatgattttccattgtgatgcagcttgggccccagagctatagtgtggt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr24 1225588 2737 + 28733288 tgaactaaatatggcctggaaaggactctgtacttctagatttgagtccctgtggacaaactgcaacctaacttaataggtagaaagaatgaaaac----cttaggagtatgtgcctgtaacaatagctgagccctggccaatcccaacagccaaacttctgccactcacacactgctgagtgttcaa-ctgtgttcaaataaggcaaatgctgagcactgtaaccagtccagttgtttctggacctcactgctgagaactgttaacggacccagttgcttctggacctcact---------------------------------------------------------------------------cctcacttcagatttctgtacatcatgttccc-tttattgtgtataaatcttccaccatgtggctgtgctggagtctcaccgaatctgctgtgattctgggggctgcctgattcgtgagccattcattgctcaattaagctcctttaaatttaattcggctgaagattttcttttaataGATGGTGTCAGAAGTGGGATCTGTGGGAGCAGGACTGCAAGGGCCTCCGGAGCTATAGTGTGGCGAGCAGGGTTGCTAGGGCTTCTAATGACCCCCAAGAGTGCTGAG-GTACAAGCAAGGCACCTGCAAGGACCCCTTTAtgatggcagcagtggcccacgtggagcagtcgctagggagacactggctgcagtggggaggagtggctggggctgtgcgctcctcgaagctggtgggagccaggaacgggtgggaaccctgccccttctaaattggcaggtaggagccccgccctcccaggcacagctgcagccgtccagccatgactgcagacccgggcatctctgcactctcagaggcccagcaagctcccctgcccccacaggctcagtcgtacctggtcccgccacctggtgtctctctcctcccagagcccactctaactttggatccaagttgaggccaaaccagggtactgtcacaacccggcctggggtgtgcaagctctgggcagtgctgacatgccagccccctgccactttggc--cccctccagactttgggcactgacaagcacaggagggaggttgaggtggggctaagggtggctcagcactggcctgcaggcacccctcagctcgaacagcctgggcgctgtgggcacagctacccaccatgggtctcctctcagctgctgagagctgaacagacgtcaggatgacctgcctgcagaaaggagctacccactgcaggtctcctatgagctgtactgttgctcaataaagcacctcttcaccttg-tcaccttctacttgcccacatacctcattcttcctggacgcaggacaagaactcaggacccgctaaccagcagggctgaaagaggtgtaac--aaacagg-------gctgaaatgcgccccttgcttgccaaattgcaggcaagaagaagagaagagagaaggagagaagagctgtggcccttcagggagcccagacctaggagctccccaagccagggctgtgacaccttctttggggctctgcagttccc-gcacctccaagcttccaggtgccactgcattccctgatacccgcagtggaggctgtttgcagtcagcctggtccagctgcagcctcacagggagctggcacctgtgccggtgcctggagctgcctgccccaccgcagctggcatgcttggctgtgtgcagtggccagatcccatgctcgcttgctcacacacccctcactgctctgtacccagctcgcccttggcaggtgtgggatccagaccattagcatgagctgagtggacagaacgagcccagtgggcccgagcaaaacacaggtaaaggtgccaccagc--cagaggtttcaggcagaaaaagtgacaccccaggattctgtaacacttgtgccctttgacctctcggagcagctggggattgtggcaaattctctctcggatttcagagctccatggatttgtgttttgagctc---tgagtttctttgagcaaatttctgttccaaactg------------------------------------ggaacagaaacgggaccgggtccaggatcagatttgatccagtagttaactggcttgaattcagttccagttagaggcctcctacatctgactgggttagaaggaaagtggtagtaaatgataatattggaggggttgtaaaatgtggcttttgaaaattcacagggatttttgtgttctacccctttgtttcatttttctcacacacttacacaggaa-gaaaaaatcactggctaagttaatcaagggaagctaggagtaaagccaatattttaggtaaaaacaggatccttaatttctggaaaactaagttccttctggctaatacattaggcctgggaagcaggaaagtcttacagaaatggcaaaatcttactaaagataacttacagtggaacactccaaatgaataatgccctgaagtgcatttaaaaataagggctcccaaattagtctcatctaacgatgcctattaatatgcaaaagcttctaaaaagatttagagatggcacggcccatctgggagcaagtttgagtcttaccagtttgatactgggtgctaagcaaagtggcttgtgtctgtc-tatgttttgtcacatatattttgctctgggcagaatgaaaaatgttaatttggttactccaagcaaccccttgggcagcatcttgcaaagctgagtggattcttcctgtggttccatgattttccattgtgatgcaacttggcccccagagctataatgtggt i nomLeu3.chr24 C 0 C 0 s calJac3.chr7 35356726 2650 + 155834243 tgaactgaatctagtctggca--gactctgtacttctgtatttgagt-cttgtggacaaactgcaactcaacttaataggcagaaacactgaaaacccaacttaggagtatgcacctgtaacagtagctgaatcttacccaatcccaaccaccaaacttcagccactcatacactgccgagtgttcagactgcgttcaaataagggaaatgctgagaactgtaaccaatccagttgtttctg---------------------ta-------------------------------------------------------------------------------------------------------cctcacttcagatttctgtacatcactttccctttttttgcctgtaattcttccaccatttggctgtgctggagtctctcagaatctgctgtgattctgggggctgcctgatttgtgaatcatttattgctcagttaagctttgttaaatttaatttggctaaaggttttcttttaataGATGGTGTCATAAGTGGGATCTGTGGGAGCAGGACTCCTAGGGCCCCCGGAGCTATAGCATGGTGAGCAGGGTTGCtagggcttctaacgacctccaagagtgctaagcgaacaagcaaatttcaagcaaggacccacttgtgATGGCAGCAGCGGCCCCTGTGAAGCAGCCATTGCAGAGACACTggctgcagtgaggaggagtggctgggactgtgtgctccacgaagctggtgatagccaggtacaggtggtagccccgccccttctgagttggcaggtggaagccctgccctcccaggcacagctgcagctgtccagccatgactgtagacctaggcacctgtgctctctcaggggtctggcaagcccccctacccctacaggctcagacatacctgatcctaccacctggcctctccctgctcccagagcccactccaactttggatcaaagtcgaggctgaacctgggcactgtcacaacctggctgggtgtgtgcactctca-ggcagtgctaacgtgccagtcccctgccacatcagccacccccccagactctgggcactgacaaacacaggaagga-gtcaaggtggggctaagggtggctcagccctggcctgcaggcacccctcaacacaaataacctgggcac--tgggcatagctacccactgtgggtctcctct---ctactgagagctgaacaaatgtctggatgacctgcctgtggagaggagctacccattccatgtctcctctgagctgtactgttgctcaataaagcatcccttcaccttgctcac---ctacttgtccacatacctaattcttcctggatgtatgacaagaacttgggacccatcaaatggcagggctgaaagaggtgtaacacaaacagg-------gctgaaacataccacttgcctgccaaattgcaggcaatgagaagagggaagag--------aagagctgtggtccttcagaaagcccagaactaggagctccctgagccagggctgtgacaccttctttggggctctggagttcctggcatctccaagcttccaggcaccactgtgttccctgataccagcagtgggagctgcttgcagtatgcctcgtacagctgcaacctcacagggagctggcacctatgccagttcctggagctacctgccccattgcagttgccatgctt-gctatgtgcaatggccagatcccatgctcacttgctcacatacccctccctgctctgtgcctggcttgacctttgcaggtgtgggatctaggctattagcatgagccaagtagacagagcaaacccagtgtgcccaagcaaaactcaggtaaaggcgccaacagccacagtggtttcaggcag-aaaaataacattccaggatcctataacacttgtgcccttt-atctttcggagcagctaggcatcatggtaaattctctcttggatttcagagctccatggatttgtgttttgagctctcttgagtttctttgagcaaa-ttctgtcccaaactg------------------------ggtttagaagttatgacagaaacgggactggacccaggctcagctttgatccagtagttaactggcttgaa------cctagtaagaggcctcctacatctgaatgggtcagaagaaaagtggtagtaaatggtagtattgtaggggttgtacaattcggcttttggaaattcacagcgatttttgtgttctacccctttgtttcatttttcttgcacacttaggga-----aaaaaaatcactggc----ccaattaaagcaacctaggagtaaagccagtattttaggtaaaaatgggatcctcaatttctggaaaactgagttccttctggctaatacattaggcctgggaaacagcaaagtcttacagaaatggcaaaatcttactaaggataacttacagtggaacatttgaaatgaataataccccaaagtgcatttaaaaatgagagctcccaaattagtctcacctagggatgcctatcaatatgca------------------------tagcatggcccagctgggggcaagtttaagtcttgccagtttgatattgggtgctaagcaaagtggctca----ggtcttatgttttctcacatgtagtttgttctggccagaat-aaaaatgttaatttggttactctaagcaacccccggggcagcatcttgcaaagctgagaggaat-tttctgtggttccatggttttccattgtgttgcaccttggaccccagagtaagaaaagggt i calJac3.chr7 C 0 N 0 a score=2817.000000 s hg38.chr1_KI270707v1_random 25647 6 + 32032 gaggag s panTro4.chr4_GL389940_random 46414 6 - 103824 gaggag i panTro4.chr4_GL389940_random C 0 C 0 s ponAbe2.chr3 42332154 6 + 202140232 gagGAG i ponAbe2.chr3 C 0 N 0 s nomLeu3.chr24 1228325 6 + 28733288 gagGAC i nomLeu3.chr24 C 0 C 0 a score=103925.000000 s hg38.chr1_KI270707v1_random 25653 432 + 32032 ggtgacagagcAAGACGTTATCTTT---AAAAAAAAATggccaggggcagtggctcacgcctgtaatcccaacacttggggaggctgaggcaggtggatcacctgaggtcaggagttcagggccagcctgaccaacaaggaaaaaccccgtctctactaaaaacacaaaattagctgggcatggtgtgacatgtctctaatcccagctactcaggaggctggggctggagaattgcttgaacctgggaggcagggggttgcagtaaaccgagatcgcatcattgcactccagcctgggcaacaagagggaaaatccacctcaaaaaaagaaaagaaTAatagatttgcctataaggttttatgaaaaagtgggtgacatttggctttctctctttaaagaagattttcagaaaatattaaaaaataatgggaaga s panTro4.chr4_GL389940_random 46420 426 - 103824 ggtgacagagcAAGACGTTACCTTT---AAAAAAAAATggccaggggcagtg------gcctgtaatcccaacacttggggagactgaggcaggtggatcacctgaggtcaggagttcagggccagcctgaccaacaaggaaaaaccccgtctctactaaaaacacaaaattagctgggcatggtgtggcatgcctctaatcccagttactcaggaggctggggcgggagaatcgcttgaacctgggaggcagggggttgcagtaaaccgagatcacatcattgcactccagcctgggcaacaagagggaaaatccacctcaaaaaaataaaagaaTAGtagatttgcctataaggttttatgaaaaagtgggtgacatttggctttctctctttaaagaagattttcagaaaatattaaaaaataatgggagaa i panTro4.chr4_GL389940_random C 0 C 0 s nomLeu3.chr24 1228331 434 + 28733288 GGCGACAGAGCAAGACACTGTCTTTAAAAAAAAAAAATggctgggcgcagtggctcacacctgtaatcccaacacttggggaggccgaggcaggtggatcacctgaggtcaggagttcggggtcagcctgaccaacaaggaaaaacaccgtgtctactaaaaacacaaaattagctgggcgtggtgc-acaggcctctaatcccagctgctcaggaggctggggcaggagaatcacttgaacccgagaggcagggggttgcagtgaaccgcggtcgcaccattgcactccagcctggacaacaagagggaaaatccatctcaaaaaataataataataatagatttgtctataaggttttatgaaaaattggatgacattcagctttctctctttaaagaagattttcaggtaatattaaaaaataatgaaaaaa i nomLeu3.chr24 C 0 N 0 a score=107245.000000 s hg38.chr1_KI270707v1_random 26085 1198 + 32032 ggagccaagatggccgaataggaacagctcgagtctacagctcccagcatgagcgacgcagaagacgggtgatttccgcatttccttttgaggtactgggttcatctcactagggagtgccagacagtgggtgcaggacagtgggtgaagtgcactgtgcactagctgaagcagggcaagtcattgcctcactcgggaagtgcaaggggtcagggagttagttccctttcctggtcaaagaacggggtgacagacggcacctggaaaatcgggccactcccaccctaacactgtgcttttccgacgggcttaggaaacggcaccccaggagattatatccggcacctggctcggagggtcctacgcacacggagtctcgctgattgctaacacagcagtctgagatcaaactgcaaggcagcagcaaggctgggggaggggcaccggctattgcccaggctctcttaggtaaacaaagcagccaggaagctcgaactgggtggagcccaccacagctcaaggaggccgtcctgcctctgcaggctccacctctgggggcagggcacagacaaacaaaaagacagcagtaacctctgcagacttaaatgtccctgtctgacagctttgaggagagcagtggttctcccagcatgcagctggagatctgagaatgggcagactgcctcctcaagtgggtccctgacccctggcccccaagcagcctaattgggaggcgccccccagtaggggcagactgacacctcacacgaccgggtactcctctgagacaaaacttccagaggaacgatcagacagcagcattcgcggatcacgaaaatccacggttttgcagacaccactgctgatacccaggcaaacagggtctggaatgggcctctagcaaactccaacagacctgaagctgagggtcatgtcttttagaaggaaaactaacaaacagaaaggacatccacaccaaaaacccatctgtacatcaccatgatcaaagaccaaacgtagataaaaccacaaagatggggaaaaaacagaacagaaaaactggaaactctaaaaagcagagcgcctctcctcctccaaaggaatgcagttcctcaacagcaacggaacaaagctggatggagaatgactttgacgagctgagagaagaaggcttcagacgatcaaattactctgagct s panTro4.chr4_GL389940_random 46846 1197 - 103824 ggagccaagatggccgaataggaacagcttgagtctacagctcccagcatgagtgatgcagaagatgggtgatttctgcatttccatttgaggtactgggttcatctcactagggagtgccagacagtgggcgcaggacagtgggtgaagtgcactgtgcactagctgaagcagggcgagtcattgcctcacttgggaagtgcaaggggtcagggagttagttccctttcctggtcaaggaaaggggtgacagacggcacctggaaaattgggtcactcccaccctaacactgtgcttttccgaccggcttaggaaacggcacaccaggagattatatctggcacatggctcggagggtcctaagcacacggagtctcgctgattgctaacacagcagtctgagatcaaactgcaaggcagcagcaagtctgggggaggggcactggctattgcccaggctctcttaggtaaacaaagcagccaggaagctcaaactgggt-gagcccaccacagctcaaggaggccgtcctgcctctgcaggctccacctctgggggcagggcacagacaaacaaaaagacagcagtaacctctgcagacttaaatgtccctgtctgacagctttgaggagagcagtggttctcccagcatgcagctggagatcagagaatgggcagactgcctcctcaagtgggtccctgacccctgacccccaagcagcctaactgggaggcaccccccagtaggggcagactgacacctcacacgaccgggtactcctctgagacaaaagttccagaggaacgatcagacagcagcattcgcggatcacaaaaatccacggttttgcagacaccactgctgatacccaggcaaacagggtctggaatgggcctctagcaaactccaacagacctgaagctgagggtcatgtctgttagaaggaaaactaacaaacagaaaggacatccacaccaaaaacccatctgtacatcaccatcatcaaagaccaaaagtagataaaaccacaaagatggggaaaaaacagagcagaaaaactggaaactctaaaaagcagaggacctctcctccgccaaaggaacgcagttcctcaccagcaatggaacaaagctggacagagaatgactttgacgagttgacagaagagggcctcagacgatcaaactactctgagct i panTro4.chr4_GL389940_random C 0 N 0