##maf version=1 scoring=roast.v3.3 a score=2497704.000000 s hg38.chr21_KI270874v1_alt 0 9732 + 166743 GAATTCAAAATAGCTGttttttgtttgt---ttttttggcttttttttttttttttttttt----tttttggaaacagagttttgctcttgttgcccaggctggagtgcaatggtgcgatctcagctcaccgcaatctccacctcccgggttcatgtgattctcctgcctcagcctcctgagtacatgggattacaggcatgtgccatcacgcctggctaattttgtatttttagtagagatgaggtttctccatgttggtcaggctagtctcgaactcccgacctcaggtgatctacctgcctcggcctcccaaagtgctgggaatacaggtgtgagccactgcacccagcTGATaatagctgctttgaggaaactcaatgatatctaaaataacacagagaaataattcagaatcctatcagataaatttaacaatgaaatggaaataactaataagaaccaagcaaagattctgaagcagaaaaatgtaattgacatactgaagaatgcatcaaagtctctcaagaacagaattgatcaagcagaataaagaattagtggtcttgaagatgggctatttggaaatgcccagtcagagaaggccaaaaaaaaaagaagaatgaaacacaactacatgatctagaaaacagcctcaaaagggcaaatgtaaaagttattggtcttaaagaggagatagagagagagagatcagggtagaaagtttattcaaagggataataacagaaaacatctcaaacctagaaaaagatatcaatattaaagtacaagaaagttatagaacacaaagcagattttaccaaaataagactacatcaagacatgtgataattaaactcccagaggtcaagaataaagaaaagatcctaaaagtagcaagataaaagaaac----aacatacaaaggagatccaataaatctaccagcaggcttttcagtggaaactttacatgctgggagagagtggtatgac---------------atagttaaagagctgaaggaatt-aaaaaacctatcctagaatagtacaaccagcaaaaatattcttcaaacatgaaggagaaataaaaactctcccagac---aaaaacctgaaggatttaatcaatgccagacctgttctataagcaatgttaaagggaattcttcatccagaaaaaaaaggatattaatgagcaataagaaatcatctgaaggttcaaaactcactggtaatagaaagtacacaaaaaacgaagaataacataacactgtaattctggtgtgtaaactacttatatgttgagtagaaagactaaaatgtgaaccaatcaaaaataataactacaacaatgtttcaaggcataggcagtacaataagatataaatagaaacaatcaaaagtttaaaaacccaggagataaagctgaagtgtggagtttttatttttgttagtttttttctttgtttgtttgttcctgtaatcagtgtca-----tcattagtttaaaataatgagtgataagatattattcacaagtctcagggtaatctcaaattaaaaaacatacaacagatacacaaaatataaaaagcaagacattaaaaccaccagcaaaaatcgctttcactaacaggaagacagaaaataaggaaagaagaaagaaaagatcacaaagcaagcagaaaacaaataacaaaatggcagagttaaattcttacttataaataataatattgaatgtaaatggactaaactctccaatcaaaagacttagagtggctgaatgaattttttaaaaaaaatgcctgatgatatgttggcaacaagaaacaaacttcacctataaagacacacgtagactgaaaataaacagaaaaagatatcacatgcaaatggaaaccaaaaaagagcaagggtcattatacttacatggaacacaatatgtttcaagacaaaaaccataaaaagagacaaagaaggtcattatataatgataagtggccaattcaacaagaatatatacaattgtaaatataatacgcacacaatacggaagcacctagatatataatgctaattggattagagctaaagagagagagagacccaaatacaataatagctagaagtttcaacaccacactttcaacaatggacagattatccagacacaaaatcaacaaagaaatattggacctaatctgcactgtaaaccaaatggacctca-------------------tagatatgcacagaacatttcaaccaatggcagcagaatacacattcttctcctcagcacattgatcattcttgaggctagaccataggttatgccacaaaacaagtcttaaaaatttcaaaaaaattgaagttacatcaagtatcttctttgcccacaaaagagtcaatctagaggtcaataacaagggggattttggagactataccaaaatatagaaattacacaatatgtttctgaatgaccagtgggttaatgaataaataaacagaaaattttaaaacgtttttaagcaaataacaatggaagcacaacatatcaaaatgtgtggcatacagcaacagaagtacaaagagtaatttttttttattatactttaagttttagggtgcaaagagtaaattttaagcctataagtgcctacatcaaaaaagtataaaaacttcaaattaactatctaatggtgcatcttaaagaactagaaaagcaagagcaaattaaaccccaaatttgtagaagaaagcaaataataaagatcaatcagaaataaatgaaattgaaatgaaaaaacaatacaaaaggccaatgcaataaaatattggttttttgaaaagat----aaaactgacaagcctttagcagacaaattaagaaca----gagatggcccaaataaataaagtcagagcaaaatacagagaatctagaatagatagagaaattcttagacatagatgtctgcctaccaagagtaagccatgaagaaatttgaagcataaatagaggctgggcacggtggctcatgcctgtaatcccagcacttttgcgagaccaaggtaggtggatcacttgagggccagagtttgagaccagcctggccaacatagtgaaaccccatctctagtaaaaacacacacaaaaaattagacaagcatggtgacatgcaattgtaatcccagctactcaagaggcggaggcaggagaatctctttcatgtaggaggcagagactgtagtgagctgaatttgcaccactgcactccagcctgggcaacagagtaaaactccatctcaaaaaacaaaacaaaacaaaaaaaacacataaatagaccaataacaaataacagatttaaaccataaaagactgtatcacagcaaagaaaagcctgggacctgatgaattctttgctgaattttagtttgaagttgggtagagtgatgcctccagctttgttcttttagcttaggatgctatattagtctgttttcatgctgctgataaagccatacctgagactgggcaattttcaaaagaaagcaatttaatggacttacaattccatgtagctggggaggcctcacaatcatggtggagggtgaaaggcatgtctcacatggtggcagacaagagaagaaggttgtgcagggaaacacctccttatataattgtcagatctcatgagacttattcactgtcatgagaacagcacaggaaagacctgcccctgtgattcaattacctcccaccaggtccctcccacaatacgtgggaattcaaggtgagattttggtggggacacagccaaaccatatcagatgcattggctattcaggctctcttttggttccatatgaattttaaaatagtttttttctagttctgtgaagactgtcaatggtagtttaatggaagtaccattgaacgtataaattgctttggatagtatggtcattttaatgctattgattcttcccatgcatgagcatggaatgtttttccatttgtttgtatcgtctctgatttcttcaagcagtggtttgtagttcacctctcctgttcactgtattcctaagtattttattatttttgtggcaattgtgaatgcgagtttgttcgtgatttggctcttggcttaactgttgttggtgtataggaatgttagtgattttgcacattgattttgtatcttgagattttgctgaagttgtttatcaccttaagaggcttttgggccaagactacagggttttctacatataggattatgtcatctgcaaacagaaataatttgactgcctctcttcctgtttgactgccttttatttctttctcttgctgactgcctggccagaagttccaatactatgttgaataggagtggtaaaagagggcatccttgtcttgtgctggctttcaaggggagttcttccagcatttgcccagtcagtatggtgctggttgtgggtttgtcacagatgactctcattattttgaggtatgatccatcactacctagtttattgagagtttttaaaatgaaggaatgttaaattttatcaaaacacttttctgcatctattgagataatcatgtggtttttgtcttagttttttg---------------cctttgtttacgtgatgaatcacatttattgatttgcatatgatgaaccaacctagcatctaggggatgaatcctacttactcatagtgaatacactttttgatgctgaatttggtttgccagtatttttttggattttttgaattgatgttcatcaaggatattggcctgaagttttcttattttgttgtatctctgccaggttggtaccaggatgatgctgatctcatagaatgagttatggatgagtcctcttcttcacttctttggaatagtttcagtagagatggtatcagctcttctttgcacttctggtaaatttcagctgtgaatctgtcttaccctgagctttttaaggttagtaggctatttattactacctcaatttgaaaacacacttttggtctgttcaggaattccatttctacctggttcagtattgggaaggtgtatgtgcccgtgaatttattcatttcttctagattttctagtttgtgtctatagaggtatttataatattctccgatggttgtttgtatttctgtggggtcagtagcaatatctcccttatcatttctgattgtgtttatttgaatcttcccctcttctttattagtctagctggtggtctaactctttcacttatttattcaaaaaaaaagaaaacacctcctgaatttgttggggttttgaatggtctttcatgtctctatctcctccagttcagctctgattttggttacttcttgtcttctgctaagtttgaaatttgtttactctttgttctctagttcttttagatatgatgttgggttgttaa-----gatctttctaattttttgatgtgggcacttaatgctataaattttcatcttaacactgccttagctgtgtcccagagattctggtaggttgtatctttttttctcattagtttcaaataacttcttgctttctgccttaatttcattattttcccaaacgttattcaggagcaggttattcaatttccatgtaatcatacggttttgagttaatgtcttagtcttaagtactaatttaattgtgctgtggtctgaaagactgtctgttgtgatttcagctcttttgcatttgctgagtaatggtgtaattctcattatgcgattaattttagagtaagtaatatgtggcaatgagaaaaatgtattttcagttgttctggggtggagagtttggtagatatttatcaggtttattttaatccaaagctgagttcaggtcctgaatatctttcttacatttctgtctcaatgatctaatattgacagtggggtgttaaattcacccacttttat--tgtgtgagtctaagtctctctgaagatctccaagaaattgatttaccaatatgggtgctcctatgttgggtgcatatatatttaagatagttagctcttcttaggttggtaataacaagcttctccaagctaaaggaggatatttgaaaccattgcaaggaagctaaaaacttgaaaaaagattagacaaatggctaactagaataaacagtgtaaagaagaacttaaatgacctgacggagctgaaaaccatggcacaacaacttcgtgacgcatgcacaagcatcactagccaatgggatcaagaggaagaaagggtatcagtgactgaagatcaaattaatgaaataaagt-----gagaagtttagagaaaaaacagtaaaaagaaacaaacaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacatttgatgggtgtacctgaaagtaacagggagaatggaaccaagttggaaaacactcttgaggatattatccaggagaacttccccaacctagcaaggcaggccaacattcaaattcaggaaatacagacaacaccacaaagatactcctcgagaagaacaaccacaagacacataattgtcagatgcaccaaggttaaatgaaggaaaaaatgttaagggcagccacagagaaagggcgggttacccacaaaggaaagcccatcagactaacagcagatctctcagcacaaattctacaagccagaagagagtgggggccaatattcaacattcttaaagaaaagaattttcaacccagaatttcatatccagccaaactaagcttcattagtgaaggagaaataaaattctttacagataagcaaatgctgagagattt-gtcaccaccaggcctgccttacaagagctcctgaaggaagcactaaacatggaaaggaacaaccggtaccagccactgcaaaaacatgccaaactgtaaataccaccaatgctaggaagaaactgcatcaactaacaggcaaaataaccagctaacatcatagtgacaagatcaaattcacacataacaatattaaccttaaatgtaaatgggctaaatgccacagttaaaagacacagactggcaaattggataaagagtcaa-gacccatcagtgtgctgtattcaggagacacatctcacatgcagagacacacataggctcaaaataaaaggatggaggaagatctaccaagaaaatggaaagc-aaaaaaaagcaggggttacaatcctagccgctgataaaataggctttaaaccagtaaagatcaaaagagacaaagaaggccattgcataatggtaaagggatcaattcaacaagaagagctaactatcctaaatattatatgcacccaatacaggagcacccagattcataaagcaagtccttagagacctacaaagagacttagactcccacacaatcataatgggagactttaacaccccactgtcaatattagacaga-taacaagacagaaggttaacaaggatatccaggacttgaactcagctctgcaccaagcagacctaatagacatctactgaactctccacccaaaatcaatggaatattcattcttctcagcaccacatcacacttactttaaaattgaagcaaagcac-tcgttggaagcaaagcactcctcagcaaatgtaaaagaaaagaaatcacaaagaactctctctcagacgatagtgcaatcaaattagaactcaggattaagaaactcattcaaaaccacacaagtacatagaaactgaacaacctgctcctgaatgactactgggtaataacaaaaagaaggcagaaataaaaaagtcctttgaaaccaatgagaacaaagacacaacgtaccagaatctctgagacacatttaaagcagcatgtagagggaaatttgtagcactaaatgccaacaagagaaagcaggaaagatctaaaatcagcaccctaacatcacaattaaaagaactggagaagcaagagcaaacacattcaaaagctagcagaaagcaagaaataactaagatcagagcagaactggaggaaatagagacacaaaaaacccttcaaaaaattaatgaatccaggagctggttttgtgaaaggatcaacaaaattgatagaccactagcaagactaataaagaaaaaaagagagaagaatcaaatacaggcaatcagaaatgataaaggggatatcaccaccaatcccacagaaatacaaactaccatcagagaatactataaacacctctacacaaataaactagaaaatctagaagaaatggataaattcctagacacatacaccctcccaagaataaactaggaagaagttgaatctctgaatagaccaataacaggctctgaaattcaggcaataattaatagcctatcaatcaatcaaaaaaagcccaggacctgatggattcacagccaaatactaccaggggtacaaagaggagctgttaccattccttctgaaactattccaatcaatagaaaaagagggaatccttcctaactcattttatgaggccagcatcatcctgataccaaagcctggcagagacacaacaaaaaaagagaatttcagaccagtatccctgatgaacatcgatgcaaaaatcctcaataaaatactggcaaacagaatctagcagcacatcaaaaagcttatccagcacgatcacgttggcttcatccctgtgatgcaaggctggtttaacatacacaaatcaataaatgtaatctgtcataaaaactgaa-caaaaacaaaaaccacatgattatctcaatagatggtgaaaaggcctttgacaaaattcaacaatgcttcatgctaaaaactctcaataatctaggtattgatgggatgtatctcaaaataataagagctatttatgacaaacccacagccaacagcatactaaatgggcaaaaactggaagcattccctttgaaaactggcacaagacagggatgccctctctcaccactcctgttcaacatagtattggaagttctggccagggcaatcaggcaggagaaagaaataaacggtattcagttaggaaaagaggaagtcaagttgtccctgtttgcagataacatgattgtatatttagaaaaccccattgtctcagcccaaatctccttcagctgataagcaactttagcaaagtctcaggatacaaaatcaatgtgcaaaaatcacaagcattcctatacaccaataacagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttcaaagggaataaaatacctaggaatccaacttacaaaggatgtgaaggacctcttcaaggagaactacaaaccacagcttaacaaaatgaaagaggacacaaacaaatggaagaacattccatgctcatggataggaagaatcaatatcatgaaaatggccatactgcccaaggtaatttatagattcaatgccgtccccatcaagctaccaatgtctttcttcaaagaattggaaaaaaaa-ctactttaaagttcatatggaaccaaaaaagagcctgcattgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacctgacttcaaactatactacaaggctacagtaaccaaaacagtgtggtactggtaccaaaacagagatatagaccaacagaacagcacagagccctcagaaataaaaccacatgtctacaatcatctgatctttgacaaacctgac s panTro4.chr21 3612725 9723 + 32799110 gaattcaaaatagctgttttttgttg-----ttttttggcttttttttttttttttttttt---------ggaaacagagttttgctcttgttgcccaggctggagtgcaatggggcgatctcagctcaccgcaatctccacctcccgggttcatgtgattctcctgcctcagcctcctgagtacatgggattacaggcatgtgccatcacgcctggctaattttgtatttttagtagagatggggtttctccatgttggtcaggctagtctcgaactcccgacctcaggtgatctgcctgcctcggcctcccaaagtgctgggaatacaggtgtgagccactgcacccagctgataatagctgctttgaggaaactcaatgatatctaaaataacacaga-aaataattcagaatcctatcagataaatttaacaatgaaatggaaataactaataagaaccaagcaaagtttctgaagctgaaaaatgtaattgacatactgaagaatgcatcaaagtctctcaagaacagaattgatcaagcagaataa----ttagtggtcttgaagatgggctatttggaaatgcacagtcagagaagac-aaaaaacaaagaagaatgaaacacaactacatgatctagaaaacagcctcaaaaggacaaatgtaaaagttattggtcttaaagaggagatagagagagagagatcagggtacaaagtttattcaaagggataataacagaaaacatctcaaacctagaaaaagatatcaatattaaagtacaagaaagttatagaacacaaagcagattttaccaaaa---gactacatcaagacatgtgataattaaactcccagaggtcaagaataaagaaaagatcctaaaagtagcaagataaaagaaac----aacatacaaaggagatccaataaatctaccagcaggcttttcagtggaaactttacatgctgggagagagtggtatgactctccccactatggtatagtttaagagctgaaggaatttaaaaaacctatcctagaatagtacaaccagcaaaaatattcttcaaacatgaaggagaaataaaaactctcccagac---aaaaacctgaaggatttaatcaatgccagacctgttctataagcaatgttaaagggaattcttcatccagaaaaaaaaggatattaatgagcaataagaaatcatctgaaggttcaaaactcactggtaatagaaagtacacaaaaaacacagaataacataacactgtaattctggtgtgtaaactactcatatgttgagtagaaagactaaaatatgaaccaatcaaaaataataactacaacaatgtttcaaggcataggcagtacaataagatataaatagaaacaataaaaagtttaaaaacccaggagataaagctgaagtgtggagtttttatttttgttagtttttttctttgtttgtttgttcctgtaatcagtgtca-----tcattagtttaaaataatgagtgataagatattattcacaagtctcagggtaatctcaaattaaaaaacatacaacagatacacaaaatataaaaagcaagacattaaaaccaccagcaaaaatcgccttcactaacaggaagacagaaaataaggaaagaagaaagaaaagatcacaaagcaagcagaaaacaaataacaaaatggcagaggtaaattcttacttataaataataacattgaatgtaaatggactaaactctccaatcaaaagatttagagtggctgaatgaattttttttaaaaa-tgcctgatgatatgttggcaacaagaaacaaacttcacctataaagacacacgtagactgaaaataaacagaaaaagatatcacatgcaaatggaaaccaaaaaagagcaggggtcatcatacttacatgggacacaatatatttcaagacaaaaaccataaaaagagacaaagaaggtcattatataatgataagcggccaattcaacaagaatatatacaattgtaaatataatacgcacacaatacggaagcacctagatatataatgctaattggattagagctaaagagagagagagacccaaatacaataatagctagaagtttcaacaccacactttcaacaatggacagattatccagacagaaaatcaacaaagaaatatcggacctaatctgcactgtaaaccaaatggacctca-------------------tagatatgcacagaacatttcaaccaatggcagcagaatacacattcttctcctcagcacattgatcattcttgaggctagaccataggttatgccacaaaacaagtcttaaaaatttcaaaaaatttgaagttatatcaagtatcttctttgcccacaaaagagtcaatctagaagtcaataacaagggggattttggagactataccaaaatatagaaattacacaatatgttcctgaatgaccagtgggttaaggaataaataaacagaaaattttacaacatttttaagcaaataacaatggaaacacaacatatcaaaatgtgtggcatacagcaacgaaagtacaaagagtaatttttttt-attatactttaagttttagggtacaaagagtaaattttaagcctataagcgcctacatcaaaaaagtataaaaacttcaaattaactatctaatggtgcatcttaaagaactagaaaagcaagagcaaattaaaccccaaatttgtagaagaaagcaaataataaagatcaatcagaaataaatgtaattgaaatgaaaaaacaacacaaaagatcaatgaaataaaatatggattttttgaaaagaa----aaaactgacaagcctttagcagacaaattaagaacaaagagagatgacccaaataaataaagtcagagcaaaacacagagaatctagaatagatggagaaattcttagacatagatgtctgcctaccaagagtaaaccatgaagaaatttgaagcataaatagaggctgggcacggtggctcatgcctgt----------cttttgcgagaccaaggtaggtggatcacttgagggccagagtttgagaccagcctggccaacatagtgaaaccccatctctactaaaaactcacacaaaaaattagacaagcatggtgacatgcaattgtaatcccagctactcaagaggtggaggcaagagaatctctttcatgtaggaggcagagactgtagtgagctgaatttgcaccactgcactccagcctgggcaacagagtaaaactccatctcaaaaaacaaaacaaaacaaaaaaa-cacataaatagaccaataacaaataacagatttaaaccataaaagactgtatcacagcaaagaaaagcctgggacctgatgaattctttgctgaattttagtttgaagttgggtagagtgatgcctccagctttgttcttttagcttaggatgctatattagtctgttttcatgctgctgataaagccatacctgagactgggcaatcttcaaaagaaagcaatttaatggacttacaattccatgtagctggggaggcctcacaatcatggtggagggtgaaaggcatgtctcacatggcggcagacaagagaagaaggttgtgcagggaaacacccccttatataattgtcagatctcatgagacttattcactgtcatgagaacagcacaggaaagacctgcccctgtgattcaattacctcccaccaggtccctcccacaatacgtgggaattcaaggtgagatttgggtggggacacagccaaaccatatcagatgcattggctattcaggctctcttttggttccatatgaattttaaaatagtttttttctagttctgtgaagactgtcaatggtagtttaatggaagtaccattgaatgtataaattgctttggatagtatggtcattttaatactattgattcttcctatgcatgagcatggaatgtttttccatttgtttgtatcgtctctgatttcttcaagcagtggtttgtagttcacctctcttgttcactgtattcctaagtattttattatttttgtggcaattgtgaatgcgagtttgttcgtgatttggctcttggcttaactgttgttggtgtataggaatgttagtgattttgcacattgattttgtatcttgagattttgctgaagttgtttatcaccttaagaggcttttgggccaagactacagggttttctagatataggattatgtcatctgcaaacagaaataatttgactgcctctcttcctgtttgactgccttttatttctttctctcgctgattgcctggccagaagttccaatactatgttgaataggagtggtaaaagagggcatccttgtcttgtgctggctttcaaggggagttcttccagcatttgcccagtcagtatggtgctggttgtgggtttgtcacagatgactctcattattttgaggtatgatccatcactacctagtttattgagagtttttaaaatgaaggaatgttaaattttatcaaaacacttttctgcatctattgagataatcatgtggtttttgtcttagttttttg---------------cccttgtttatgtgatgaatcacatttattgatttgcatatgatgaaccaacctagcatctaggggatgaatcctacttactcatagtgaatacactttttgatgctgaatttggtttgccagtatttttttggattttttgaattgatgttcatcaaggatattggcctgaagttttcttattttgttgtatctctgccaggttggtaccaggatgatgctgatctcatagaatgagttatggatgagtcctcttcttcacttctttggaatagtttcagtagagatggtatcagctcttctttgcacttctggtaaatttcagctgtgaatctgtcttaccctgagctttttaaggttagtaggctatttattactacctcaatttgaaaacacacttttggtctgttcaggaattccatttcttcctggttcagtattgggaaggtgtatgtgcccgtgaatttattcatttcttctagattttctagtttgtgtgtatagaggtatttataatattctccgatggttgtttgtatttctgtggggtcagtagcaatatctcccttatcatttctgattgt-tttatttgaatcttcccgtcttctgtattagtctagctggtggtctaactctttcatttatttatttaaaaaaaaagaaaacacctcctgaatttgttggggttttgaatggtctttcatgtctctatctcctccagttcagctctgattttagttacttcttgtcttctgctaagtttgaaatttgtttactctttgttctctagttcttttagatatgatgttgggttgttaacttaagatctttctaattttttgatgtgggcagttaatgctataaattttcatcttaacactgccttagctgtgtcccagagattctggtaggttgtatctttttttctcattagtttcaaataacttcttg-tttctgccttaatttcattattttcccaaacgttattcaggagcagattattcaatttccatgtaatcatacggttttgagttaatgtcttagtcttaagttctaatttaattgtgctgtggtctgaaagactgtctgttgtgatttcagctcttttgcatttgctgagtaatggtgtaattctcattatgcgattaattttagagtaagtaatatgtggcaatgagaaaaatgtattttcagttgttctggggtggagagtttggtagatatttatcaggtttattttaatccaaagctgagttcaggtcctgaatatctttcttacatttctgtctcaatgatctaatattgacagtggggtgttaaattcacccacttttat--tgtgtgagtctaagtctctctgaagatctccaagaaattgatttaccaatatgggtgctcctatgttgggtgcatatatatttaagatagttagctcttcttaggttggtaataacaagcttctccaagctaaaggaggatatttgaaaccattgcaaggaagctaaaaacttgaaaaaagattagacaaatggctaactagaataaacagtgtagagaagaacttaaatgacctgatggagctgaaaaccatggcacaacaacttcgtgacgcatgcacaagcatcactagccaatgggatcaagaggaagaaagggtatcagtgactgaagatcaaattaatgaaataaagt-----gagaagtttagagaaaaaagagtaaaaagaaacaaacaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacatttgatgggtgtacctgaaagtaacagggagaatggaaccaagttggaaaacactcttgaggatattacccaggagaacttccccaacctagcaaggcaggccaacattcaaattcaggaaatacagacaacaccacaaagatactcctcgagaagaacaaccacaagacacataattggcagatgcaccaaggttaaatgaaggaaaaaatgttaagggcagccacagagaaagggcgggttacccacaaaggaaagcccatcagactaacagcagatctctcagcacaaactctacaagccagaagagagtgggggccaatattcaacattcttaaagaaaagatttttcaacccagaatttcatatccagccaaactaagcttcattagtgaaggagaaataaaattctttacagataagcaaatgctgagagattttgtcaccgccaggcctgccttacaagagctcctgaaggaagcactaaacatggaaaggaaaaaccggtaccagccactgcaaaaacatgccaaactgtaaataccaccaatgctaggaagaaactgcatcaactaacaggcaaaataaccagctaacatcatagtgacaagatcaaattcacacataacaatattaaccttaaacgtaaatgggctaaatgccacagttaaaagacacagactggcaaattggataaagagtcaa-gacccatcagtgtgctgtattcaggagacacatctcacatgcagagacacacataggctcaaaataaaaggatggaggaagatctaccaagaaaatggaaagc-aaaaaaaagcaggggttacaatcctagccgctgataaaataggctttaaaccaataaagatcaaaagagacaaagaaggccattgcataatggtaaagggatcaattcaataagaagagctaactatcctaaatattatatgcacccaatacaggaacacccagattcataaagcaagtccttagagacctacaaagagacttagactcccacacaatcataatgggagactttaacaccccactgtcaatattagacaga-taacaagacagaaggttaacaaggatatccaggacttgaactcagctctgcaccaagcagacctaatagacatctactgaaatctccacccaaaatcaatggaatattcattattctcagcaccacatcacacttactttaaaattgaagcaaagcac-tcgttggaagcaaagcactcctcagcaaatgtaaaagaaaagaaatcacaaagaactgtctctcagacaatagtgcaatcaaattagaactcaggattaagaaactcattcaaaaccacacaagtacatagaaactgaacaacctgctcctgaatgactactgggtaataacaaaaagaaggcagaaataaaaatgtcctttgaaaccaatgagaacaaagacacaacgtaccagaatctctgggacacatttaaagcagcatgtagagggaaatttgtagcactaaatgcccacaagagaaagcaggaaagatctaaaatcggcaccctaacatcacaattaaaagaactggagaagcaagagcaaacacattcaaaagctagcagaaagcaagaaataactaagatcagagcagaactggaggaaatagagacacaaaaa-cccttcaaaaaattaatgaatccaggagctggttttttgaaaggatcaacaaaattgatagacctctagcaagactaataaagaaaaaaagagagaagaatcaaatagatgcaataaaaaatgataaaggggatatcaccactgattccacagaaatacaaactaccatcagagaatactataaacacctctacacaaataaactagaaaatctagaagaaatggataaattcctagacacatacaccctcccaagaataaactaggaagaagttgaatctctgaatagaccaataacaggccctgaaattcagacaataattaatagcctatcaatcaa----aaaaagcccaggaccagatggattcacagccaaatactaccaggggtacaaagaggagctgttaccattccttctgaaactattccaatcaacagaaaaagagggaatcctccctaactcattttatgaggccagcatcatcctgataccaaagcctggcagagacacaacaaaaaaagagaatttcagaccagtatccctgatgaagattgatgcaaaaatcctcaataaaatactggcaaaccgaatctagcagcacatcaaaaagcttatccaccacgatcacgttggcttcatccctgtgatgcaaggctggtttaacatacacaaatcaataaatgtaatctgtcataaaaaccgaa-caaaaacaaaaaccacatgattatctcaatagatggtgaaaaggcctttgacaaaattcaacaatgcttcatgctaaaaactctcaataaactaggtattgatgggatgtatttcaaaataataagagctatttatgacaaacccacagccaacagcatactaaatgggcaaaaactggaagcattctctttgaaaactggcacaaggcagggatgccctctctcaccactcctgttcaacatagtattggaagttctggccagggcaatcaggcaggagaaagaaataaagggtattcagttaggaaaagaggaagtcaagttgtccctgtttgcagataacatgactgtatatttagaaaaccccattgtctcagcccaaatctccttaagctgataagcaactttagcaaagtctcaggatacaaaatcaatgtgcaaaaatcactagcattcctatacaccaataacagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaaaggatgtgaaagacctcttcaaggagaactacaaaccacagcttaacaaaataaaagaggacacaaacaaatggaagaacattccatgctcatggataggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatttacagattcaatgccatccccatcaagctaccaatgtctttcttcaaagaattggaaaaaaaaactactttaaagttcatatggaaccaaaaaagagcctgcattgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacctgacttcaaactatactacaaggctacagtaaccaaaacagtgtggtactggtaccaaaacagagatatagaccaacagaacagaacagagccctcagaaataatactacatgtctacaatcatctgatctttgacaaacctgac i panTro4.chr21 N 0 C 0 s nomLeu3.chr25 4378472 9665 + 32716333 gaattcaaaatagctgttttttgtttgtttgttttttggctttttttttttttttttttttttttttttttgagacagagttttgctcttgttgcccaggctggagtgcaatggtgcgatctcagctcaccgcaacctccacctcccgggttcatgtgattctcctgcctcagcctcccgagtatgtgggattacaggcatgtgccatcacgcctggctaattttgtatttttagtagagatggggtttctccatgttggtcaggctagtctcgaactcctgacctcaggtgatctgcctgccttggcctcccacagtgctgggaatacaggcataagcctccacactcagctgaaaatagctgctttgaggaaacccaatggtatctaaaataacacagagaaataattcagaatcctatcagataaatttaacaatgaaa--------------------caggcaaagattctgaagctgaaaaatgtaactgacatactgaagaatgcatcaaagtctctcaagaacagaattgatcaagcagaataaagaattactggtcttgaagatgggctatttggaaatgcacagtcagagaagac-aaaaatcaaagaagaatgaaacacaactacaagatctagaaaacagcctcaaaagggcaaatgtacaagttattggtcttaaagaggagatagagagagagagatcagggtagaacgtttattcaaagggataataacagaaaatatctcaaacctagaaaaagatatcaatattaaagtacaagaaagttatagaacacaaagcagattttacccaaagaagactacatcaagacgtgtgataattgaactcccagaggtcaagaataaagaaaagatcctaaaagtagcaagataaaagaaacaaataacatacaagggagatccaataaatctaccagcaggcttttcagtggaaactttacatgctgggagaaagtggtatgac---------------atagttaaagagctgaaggaatt-aaaaaacctatcctagaatagtacaaccagcaaaaatattcttcaaacatgacagagaaataaagactctcccagacaagaaaaacctgaagaatttcatcaatgccagacctgttctataagcaatgttaaagggaattcttcagtcag-aaaaaaaggatattaatgaacaataagaaatcatctgaagctacaaaactcactggtaatagaaagtacatgaaaaacacagaataacataacactgtaattgtggtgtgtaaactactcatatgttgagtagaaagactaaaatatgaaccaatcaaaaataataactacaacaatgtttcaaggcataggcagtacaataagatatgaaaagaaacaacaaaaagtttaaaaagccaggagataaagctgaagtgtggagtttttgtttttgttagtttttttc----tttgtttgttcctgtaatcagtgttaagttgtcattagtttaaaataatgagtgataagatattattcacaagtctcaaggtaacctcaaattaaaaaccatgcaacagatacacaaaatataaaaagcaagacattaaaaccaccagcaaaaatcaccttcactaacaggaagacagaaagtaaggacagaagaaagaaaagatcacaaagcaagcagaaaacaaataacaaaatggcagaggtaaattcttacttataaataacaacattgaatgtaaatggactaaactctccaatcaaaagacttacagtggctgaatgaattaaaaaaaaaaaatgcctgatgatatcttggcaacaagaaacaagcttcacctataaagacacacgtagactgaaaataaacagaaaaagatatcacatgcaaatggaaaccaaaaaagagcaggggtcattatacttacaagggacacaatatatttcaagaaaaaaaccataaaaagagacaaagaaggtcattatataatgatacgcggccaattcaacaagaatatatacaattgtaaatataatacgcacacaatacggaagcacctagatatataaagctaattggattagagctaaagagagacagagacccaaatacagtaatagctagaagtttcaacaccacacttt-----------------------cagaaaatcaatgaagaaatattggacctaatctgcactataaaccaaatggacctcatagatatgtacagaacatttagatatgtacagaacatttcaaccaatggcagcagaatacacattcttctcctcagcacattgatcattcttgaggctaaac-------------------caagccttaagaatttcaaaaaatttgaagttatatcaagtatcttctttgcccacaaaagagtcaatctagaagtcaataacaagggggattttggagactataccaaaatatagaaattacacaatatgtccctgaatgaccagtgggttgatgaataaataaatagaaaattttaaaacttttttcagcaagtaacaatggaaacacaacatatcaaaatgtgtggcatacagcaacagaagtacaaag--------------attat----------------------------atattaagcctacaagggcctacatcaaaaaagtataaaaacttcaaataaagtatctaatggtgcatcttaaagaactagaaaagcaagagcaaattaaaccccaaattagtagaagaaagcaaataataaagatcaatcagaaataaatgaaattgaaatgaaaaaacaatacaaaatatcaatgaaataaaataatggttttttgaaaagataaacaaaattgacaagccttttgcagacaaattaagaacaaagagagatgacccaaataaataaagtcagagcaaaatacagagaatctagaacagatggagaaattcttagacatagatgtctgcctaccaagagtaaaccatgaagacatttgaaacataaatagaggctgggcacggtggcttatgcctgtaatcccagcacttttgggagcccaaggtaggtggatcacttgaggtccagagtttgagaccagcctggccaacatagtgaaaccccatctctactaaaaacacacacaaaaaattagacaggcatggtgacatgcaattgtaatcccagctactcaagaggcagaggcaggagaatctctttcatgtaggaggcagagactgtagtgagctgaatttgcatcactgcactccagcctgggcaacagagtaaaactccatctcaaaaaacaaaacaaaacaaaaaaa-cacataaatagaccaataacaaataacagatttaaaccataaaagactgtatcacagcaaagaaaagcctgggacctgatgaattctttgctgaattttagtttgaagttgggtagagcaatgcctccagcattattcttttagcttaggatgctatattagtctgttttcatgctgctgataaagacata-ctgagactgggcaattttcaaaagaaagccatttaatggacttacagttccatgtagctggggaggcctcacaatcatggtggagggtgaaaggcttgtctcacatggcagcagacaagagaaggagcttgtgcagggaaacacccccttatataatcatcagacctcatgagacttattcactgtcatgagaacagcacaggaaagacctgcccctatgattcaattacctcccaccaggtccctcccacaatacatgggaattcaaggtgagatttgggtggggacacagctaaaccatatcagatgcattggctattcaggctctcttttggttccatatgaattttaaaatagtttttttctagttctgtgaagactgtcaatggtagcttaatggaaataccattgaatgtataaattgctttggatagtatggtcattttaatactattgatgcttcctatgcatgagcatggaatgtttttccatttgtttgtgtcatctctgatttctccgagcagtggtttttagttcacctctcttgttcactgtattcctaagtattttattatttttgtggcaattgtgaatgcgagtttattcgtgatttggctcttggcttaactgttgttggtgtataggaatgttagtgattttgcacattgattttgtatcttgagactttgctgaagttgtttatcaccttaagaggcttttgggccaagaccatagggttttctagatataggattatgtcatctgaaaacagaaataatttgactgcctctcttcctgttcgactgccctttatttctttctcttgctgattgcctggccagaagttccaatactatgttgaataggagtggtaaaagagggcatccttgtcttgtgctggctttcaaggggagtgcatccagcatttgcccattcagtatggtattggttgtgggtttgtcacagatgactgtcattattttgaggtatgatccgtcactacctagtttattgagagtttttaaaatgaaggaatgttaaactttatcaaaacccttttctgtatctattgagataatcacgtggcttttgtcttagttttttgtctttaggtttttgtcttttgtttatgtgatgaatcacatttattgatttgcatatgatgaaccagcctggcatctaggggatgaatcctacttattcatagtgaatgcactttttgatgctgaatttggtttgccagtattttgttggattttttgcatcaatgttcatcaaggatattggcctgaagttttcttattttgttgtatctctgccaggttcgtatcaggatgatgctggtctcatagaatgagttatggatgagtcctcttcttcacttctttggaatagtttcactagagatggtaccagctcttctttgcacatctggtaaatttcagctgtgaatctgtcttatcccgagctttttaaggttggtaggctatttattactacctcaatttgaaaactcacttttggtctgttcaagaattccatttcttcctgattcagtattgggaaggtgtatatgcccgtgaatttattcatttcttctagattttctagtgtgcgtgtatagaggtatttgtaatattctctgatggttgtttgtatttctgtggggtcagtagcaatatctcccttatcatttctgattgtgtttatttgaatcttcccctcttctttattagtctagctggtggtctaactcttttatttatttattcaaaaaa----aaaacagctcctgaatttgttggggttttgaatggtctttcatgtctctatctccttcagttcagctctgattttagttacttcttgtcttctgctaagtttgaaatttgtttacacttggttctctagttcttttagatgtgatgttaggttgttaatttaagatctttctaattttttgatgtgggcacttaatgctataaactttcatcttaacactgccttagctgtgtcccagagattctggtaggttgtatctttttttctcattagtttcaaataacttcttgctttctgccttaatttcattatttacccaaaagttattcaggagcaggttattcaatttccatgtagtcatatggttttgagttaatgtcttagtcttgagttctaatttaattgtgctgtggtctgaaagactgtctgttgtgatttcagctcttttgcgtttgctgaggaatgttgtaattctcattatgcggttaattttagagtaagtaatatgtggcaatgagaaaaatttatattcagttattctggggtggagagtttggtagatatttatcaggtttattttaatccaaagctgagttcaggtcctgaatatctttcttacatttctgtctcaatgatctaatattgacagtggggtgttaaattctcccactttaattgtgtgtgagtttaagtctctttgaatatctctaagaaattgatttatcaatatggatgctcctgtgttgggtgcatatatatttaagatagttagcttttcttaggtcggtaataacaagcttctccgagctaaaggagaatgtttgaaatcattgcaagtaagctaaaaacttgaaaaaagaatagatgaatggctaactagaataaaaagtgtagagaagaacttaaatgacctgatggagctgaaaaccatggtacaagaacttcgtgatgcatgcacaagcttcaatagccgatgggatcaagtggaagagagggtatcagtgactgaagatcaaattaatgagataaagtgaaaagagaagtttagagaaaaaagagtaaaaag----aaacaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacatttgataggtgtacttgaaagtgacagggagaatggaaccaagttggaaaacactct------------ccaggagaacttccccaacctagcaaggcaggccaacattcaaattcaggaaatacagagaacaccacaaagatactcctcgagaagagcaaccacaagacacataattgtcagatgcaccaaggctaaatgaagg-aaaaatgttaagggcagccagagagaaaggtcgggttacccacaaaggaaagcccatcagactaacagtggatctctcagcagaaactgaacaagccagaagagagtgggagccaatattcaaca-tattaaagaaaagaattttcaacccagaatttcatatccagccaagctaagcttcatatgtgaaggagaaataaaattctttacagacaagcaaatgctgagagattttgtcaccaccaggcctgccctaaaagagctcctgaaggaagcactcaacatggaaatgaacaactggtaccatccactgcaaaaacatgccaaactgtaaagaccactgatgctaggaagaaactgcatcaactaatgggcaaaataaccagctaacatcataatgacaagatcaaattcacacataacaatattaaccttaaatgtaaatgagctaaatgctccagttaaaagacacagactggcaaattggat--agagtcaaggacccatcagtgtgctgtattcaggagacacatctcacatgcagagacacacatagactaaaaataaagggatggaggaagatctaccaagcaaatggaacgcaaaaaaaaagcaggggttacaatcctagtcactgataaaataggctttaaaccaataaagatcaaaagagacaaagaaggccattgcatcatggtaaagggatctattcaacaagaagagctaactatcctaaatattatatgcacccaatacaggagcacccagattcataaagcaagtccttagggacttgcaaagagatttagactcccacacaataataatgggagactttaacaccccactatcaatattagacagattgacaagacagaaagttaacaaggatatccaggacttgaactcacctctgcaccaagcagacctaatagacatctaccgaactctccacccaaaatcaatggaatatacattcttctcagcaccgcatcacacttattttaaaactgac------cacattgttggaagtaaagcactcctcagcaaatgtaaaagaacagaaatcacaacaaactgtctctcagaccacaatgtgatcaaattagaactcaggattaagaaactcactcaaaaccacacaagtacatggaaactgaacaacctgctcctgaatgactactgggtaataacaaaaagaaggcagaaataaagatgctctttgaaaccaatgagaacaaagacataacacaccagaatctctgggacacatttaaagcagtgtgtagagggaaatttatagcactaaatgcccacaagagaaagcagaaaagatctaaaatcaacaccctaacatcacaattaaaagaactagagaagcaagagcaaacatattcaaaagctagcagaaggcaagaaataactaatatcagagcagaactgaaggagatagagacacaaaaaaaccttaaaaaaatcaatgaatccaggagctggttttttgaaaagaccaacaaaattgatagaccactagcaagagtaataaagaagaaaagagagaaaaatcaaagagactcaataaaaaatgataaaggggatatcaccaccaatcccacagaaatacaatctaccaccagagaatactataaacacgtctacacaaataaactagaaaatctagaagaaatggataaattcctggacacatacactctcccaagattaaaccagggagaagtcggatctctgaatagactaataacaggctctgaaattgaggcaataattaatagcctaccaaccaa----aaaaagcccaggaccagatggattcacagctgaattctaccagaggtacaaagaggagctgttaccattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactcattttatgaggccagcatcatcctgataccaaagcctggcagagacacaaccaaaaaagaaaatttcagaccaatatccctgatgaacatcaatgcaaaaatcctcaataaaatactggcaaaccaaatccagcagcacatcaaaaagcttatccaccacaatcaagttggcttcatccctgggatgcaaggctggcttaacatacacacatcaataaatgtaatccatcatataaacagaaccaaaaacaaaaaccacatgattatctcaatagatggtgaaaaggcctttgacaaaattcaacagccctccatgccaaaaactctcaataaactaggtgttgatgggacgtatctcaaaataataagagctatttatgacaaacccacagccaatagcatactaaatgggcaaaaactggaagcattccctttgaaaactggcacaagacagagatgccctctctcaccactcctattcaacatagtgttggaagttctggccagggcaattaggcaggagaaagaaataaagggtactcagttaggaaaagaggaagtcaaattgtccctgtttgcagataacatgattgtatatttagaaaatcccatcgtctcagcccaaatctccataagctgataggcaacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaatcacaagcattcctatacaccaataacagacaaacagagagtcaaatcctgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaaaggatgtgaaggacctcttcaaggagaactacaagccacagctcaacaaaataaaagaggacacaaacaaatagaagaacattccatgctcatggataggaagtatcaatatcatgaaaatggccatattgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatgactttcttcacagaattggaaaaaaaa-ctactttaaagttcatatggaaccaaaaaagagcctgcattgccaagacaatcctaagccaaaggaacaaagctggaggcatcatgctacctgacttcaaactatactacaaggctacagtaaccaaaacagcatgatactggtaccaaaacagagatatagaccaacagaacagaacagagccctcagaaataataccacatgactactaccatctgatctctgacaaacctgac i nomLeu3.chr25 N 0 C 0 a score=7397.000000 s hg38.chr21_KI270874v1_alt 9732 33 + 166743 aaaaac--aagaaatggggaaaggattccctattt s panTro4.chr21 3622448 33 + 32799110 aaaaac--aagcaatggggaaatgattccctattt i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4388137 35 + 32716333 aaaaacaaaagaaatggggaaagggttccctattt i nomLeu3.chr25 C 0 C 0 s papAnu2.chr3 150850539 24 - 180432695 aaaaat--aaaaaataaaaaataaat--------- i papAnu2.chr3 N 0 C 0 a score=1241507.000000 s hg38.chr21_KI270874v1_alt 9765 1017 + 166743 aataaatggtgctgggaaaactggatagccatatgtagaaagctgaaactggatcccttccttaaaccttatacaaaaattaattcaagatggattaaagattcaaatattagacctaaaaacataaaatccctagaagaaaacctaggcattaccattcaggacataggcatgggctaggacttcatgactaaaacactaaaagcaatggcaacgaaagccaaaatagacaaatgggatctaattaaactgaagagcttctgcacagcaaaataaactaaccatcagagtgaacaggcaacctaaagaatgggagaaaatttttgcaatctacccatctgacaaggggctaatatccagaatctacaaagaactgaaacaaatttacaag-aaaaaatcaaacagccccatcaaaaagtgggcaaaggaaatgaacagacacttctcaaaaagaagacctttatgcagccaacagacacatgaaaaaa-tgttcatcatcactggccatcagagaaatgtaaatcaataccaca-tgagataccatctcacaccaattagaatggcgatcattaaaaagtcaggaaacaacaggtgctggagaggatttggagaaataggaacacttttacactgttggcaggagtgtaaactagttcaaccattgtggaagtcagtgtggtgattcctcaaggacctagaaccagaaataccatttgacccagccatcacattactggatatatacccaaaggattacaaatcatgctgctataaagacacatgcacatgtatgtttatcgtggcattattcacaatagcaaagacttggaaccaacccaaatatccatcaatgatagactggattaagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaaaggatgagttcatgtcctttgcagggacatggatgaagctggaaaccatcattctgagcaaactatcacaaggacagaaaaccaaacactatgtgttctcac s panTro4.chr21 3622481 1017 + 32799110 aataaacggtgctgggaaaactggatagccatatgtagaaagctgaaactgtatcccttccttaaaccttatacaaaaattaattcaagatggattaaagatttaaatgttagacctaaaaacataaaatccctataagaaaacctaggcattaccattcaggacataggcatgggcaaggacttcatgactaaaacactaaaagcaatggcaacgaaagccaaaatagacaaatgggatctaattaaaccgaagagcttctgcacagcaaaataaactaaccatcagagtgaacaggcaacctaaagaatgggagaaaatttttgcaatctacccatctgacaaagggctaatatccagaatctgcaaagaactgaaacaaatttacaag-aaaaaatcaaacagccccatcaaaaagtgggcgaaggaaatgaacagacacttctcaaaaagaagacctttatgcagccaacagacacatgaaaaaa-tgctcatcatcactggccatcagagaaatgtaaatcaataccacaatgagataccatctgacaccaattagaatggcgatcattaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaataggaacacttttacactgttggcaggagtgtaaactagttcaaccattgtggaagacagtgtggtgattcctcaaggacctagaaccagaaataccatttgacccagccatcccattactggatatatacccaaaggattataaatcatgctgctataaagacacatgcacatgtatgtttatcgtggcattattcacaatagcaaagacttggaaccaacccaaatatccatcaatgatagactggattaagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaa-ggatgagttcatgtcctttgcagggacatggatgaagctggaaaccatcattctgagcaaactatcacaaggacagaaaaccaaacactatgtgttctcac i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4388172 1009 + 32716333 aataaacggtgctgggaaaactggctagccatatgtagaaagctaaaactggatcccttccttaaaccttatacaaaaattaattcaagatggattaaagattgaaatgttagacctaaaaacataaaatccctagaagcaaacctaggcaatacccttcaggacataggcatgggcaagtacttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaattaacaaatgggatctaattaaactgaagagcttctgcacagcaaaataaactaaccatcagagtgaacaggcaacctacagaatgggagaaaatttttgcacactacccatctgacaaagggctaatatccagaatctacaaagaacttaaacaaatttacaag-aaaaaatcaaacaaccccatcgcaaagtgggcgaaggaaatgaacagacacttctcaaaaagacgacctttatgcagccaacagacacatgaaaaaa-tgctcatcatcactggccatcagagaaatgtaaatcaaaaccacaatgagataccatctcacaccaattagaacggccatcattaaaaagtcaggaaacaacaggtgctggagagcctgtggagaaataggaacatttttacactgttggtgagactctaaactagttcaaccattgtggaagacagtctggcaattcctcaaggatctagaaccagaaacatcatttgacccagccatcccattactgggtatatactcaaaggattataaatcatgct--------gacacatgcacacgtatgcttattgtggcattattcacaatagcaaagacttggaaccaacccaaatgtccatcaatgatagactggattaagaaaatatggcacatatgcaccatggaatactatgcagccataaaaat-ggatgagttcatgtcctttgcagggacatggatgaagctggaaaccatcagtctgagtaaactatcgcaaggacagaaaaccaaacactgcgtgttctcac i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162166154 1002 - 192294377 aataaatggtgctatgaaaactggctagccatatgtagaaagctgaaactggatcccttccttacatcttatacaaaaattaattcaagatgaatt----acttaaatgttagacctaaaaccacaaaaatcctagaagaaaacctaggcaataccattcaggacataggcatgggcaaggacttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattagactaaagagcttctgcacatcaaaagaaact-accatcagagtgaacaggcaacctacagaatgggagaaaatttttgcagtctacccatctgacaaatggctaatatccagaattgacaaagaacttaaacaaatttacaagaaaaaaatcaaacaaccccatcaaaaagtgggcaaaggatatgaacagacattgctc-aaaagaagacatttgtacagccaaccgacacatgaaaaaaatgc---tcatcactggccatcagagaaatgcaaatcaaaaccacaatgagataccatctcacaccagttagaatggcaatcattaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaatagga--------acactgttggtgggactgtaaactagttcaaccgttgtggaagacaatacggcgattcctcaaggatctaaaactagaaacaccgtctgacccagccatcccattactgagtatatacccaaaggattataaatcatgcttctataaagacatatgcacacgtacgtttatcgtggcactattcacaatagcaaagacttggaaccaacccaaatgtccatcagtgacagactggattaagaaaacgtgacacatatacaccatggaatactatgtagccataaaaaa-cgatgacttcttctcctttgtagggacatggatgcagctggaaaccatcattctgagcaaactatcgcaaggacagaaaaccaaacaccgcatgttctcat i macFas5.chr3 N 0 C 0 s papAnu2.chr3 150850563 1013 - 180432695 aataaatggtgctatgaaaactggctagccatatgtagaaagctgaaactggatcccttccttacatcttatacaaaaattaattcaggatgaatt----acttaaatgttagacctaaaaccacaaaaatcctagaagaaaacctaggcaataccattcaggacataggcatgggcaaggacttcatgtctaaaacaccaaaagcagtggcaacaaaagccaaaattgacaaatgggatctaattagactaaagagcttctgcacatcaaaagaaact-accatcagagtgaacaggcaacctacagaatgggagaaaatttttgcagtctacccatctgacaaatggctaatatccagaatttacaaagaacttaaacaaatttacaagaaaaaaatcaaacaaccccatcaaaaagtgggcaaaggatatgaacagacacttctc-aaaagacgacattttTACAGCCAACCGACACATgaaaaaagtgctcatcatcactggccatcagagaaatgcaaatcaaaaccacaatgagataccatctcacaccagttagaatggcaatcattaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaataggaacacttttacactgttggtgggactgtaaactagttcaaccgttgtggaagacaatacggcaattcctcaaggatctaaaactagaaacaccgtctgacccagccatcccattactgagtatatacccaaaggattataaatcatgcttctataaagacatatgcacacgtatgtttattgtggcactcttcacaatagcaaagacttggaaccaacccaaatgtccatcaatgacagactggattaagaaaatgtggcacatatacaccatggaatactatgtagccataaaaaa-cgatgactTCTtctcctttgtagggacatggatgcagctggaaaccatcattctgagcaaactatggcaaggacagaaaaccaaacaccacatgttctcac i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14951623 1013 - 90373283 aataaatggtgctatgaaaactggctagccatatgtagaaagctgaaactggatcccttccttacatcttatacaaaaattaattcaagatgaatt----acttaaatgttagacctaaaaccacaaaaatcctagaagaaaaccgaggcaataccattcaggacataggcatgggcaaggacttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattagactaaagagcttctgcacatcaaaagaaact-accatcagagtgaacaggcaacctacagaatgggagaaaatttttgcagtctactcatctgacaaagggctaatatccagaatttacaaagaacttaaacaaatttacaagaaaaaaatcaaacaaccccatcgaaaagtgggcaaaggatatgaacagacacttctc-aaaagaagacatttgttcagccaactgacacatgaaaaaaatgctcatcatcactggccatcagagaaatgcaaatcaaaaccacaatgagataccatctcacaccagttagaatggggatcattaaaaagtcaggaaacaacaggtgctggagaagatgtggagaaataggaacacttttacactgttggtgggactgtaaactagttcaaccgttgtggaagacaatatcgcgattcctcaaggatctaaaactagaaacaccgtctgacccagccatcccattactgagtatatacccaaaggattataaatcatgctgctataaagacacatgcacacgtatgtttattgcggcactattcacaataggaaagacttggaaccaacccaaatgtccatcaatgacagactggattaagaaaatgtggcacatatacaccatggaatactatgtagccataaaaaa-cgatgacttcctctcctttgtagggacatggatgcagctggaaaccatcattctcagcaaactatcgcaaggacagaaaaccaaacaccgcatgttctcat i chlSab2.chr2 N 0 C 0 a score=388208.000000 s hg38.chr21_KI270874v1_alt 10782 236 + 166743 tcacaggtgggaattgaacaatgagaacacttggacacagggtggggaacaacacacaccggggcctgtcatggggtagggggctgggggagggatagcattaggagaaatacctaatgtaaatgatgagttaatgggtgcagcacaccaacatggc--------------------------------acatgtatacatgtgtaacaaa-ctgcacgttgtgcacatgtaccctagaacttaaagtatag---taagaaaaaagaaaATA s panTro4.chr21 3623498 236 + 32799110 tcacaggtgggaattgaacaatgagaacacttggacacagggtggggaacaacacacaccggggcctgtcatggggtggggggctgggggagggatagcattaggagaaatacctaatgtaaatgatgagttaatgggtgcagcacaccaacatggc--------------------------------acatgtatacatgtgtaacaaa-ctgcacgttgtgcacatgtaccctagaacttaaagtatag---taagaaaaaagaaaATA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16877615 237 + 48394510 tcataggtgggaattgaacaatgtgaacacttggacacagggtggggaacatcacacaccggggcctgtcatggggtggggggctgggggagggatagcattaggagaaatacctaatgtaaatgacgagttaatgggtgcagcacaccaacatggc--------------------------------acatgtacacatgtgtaacaaacctgcatgttgtgcacatgtaccctagaacttaaagtataa---taagaaaaaagaaaAGA i ponAbe2.chr21 N 0 C 0 s nomLeu3.chr25 4389181 236 + 32716333 tcataggtgggaactgaacaatgagaacacttggacatagggtggggaacatcacacaccggggcctgtcatggggca-ggggctgggggagggatagcattaggagaaatacctaatgtaaatgatgagttaatgggtgcagcacaccaacgtggc--------------------------------acatgtatacatgtgtaacaaacctgcacgttgtgcacatgtaccctagaacttaaagtatga---taagaaaaaagaaaATA i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162167156 246 - 192294377 tcataggtgggaactgaacaatgagaacacttggacacaggaaggggaccatcacacactggggcctgtcatggcatggggggcagggggaggtgtagcattagaagaaatacctaatgtaaatgacaagttaatgggtgcagcacaccaacatggc--------------------------atatatatatatatatatatgtaacaaacctgcaccttgtgcacctgtaccctagaatttaaagtataattttaaaaaaagaaaaaCTA i macFas5.chr3 C 0 I 14 s papAnu2.chr3 150851576 272 - 180432695 tcataggtggaaattgaacaatgagatcacttggacacaggaaggggaacatcacacactggggcctgtcatggcatggggggcagggggagggatagcattagaagaaatacctaatgtaaatgacaagttaatgggtgcagcacaccaacatggcatatatatatatatatatatatatatatatatatatatatatatatgtaacaaacctgcaccttgtgcacctgtaccctagaatttaaagtataattttaaaaaaagaaaaacta i papAnu2.chr3 C 0 I 9 s chlSab2.chr2 14952636 240 - 90373283 tcataggtggaaattgaacaatgagaacacttggacacaggaaggggaacatcacacactggggcctgtcatggcatggggagcagggcaagggatagcattatgagaaatacctaatgtaaatgacaagttaatgggtgcagcacaccaacatggc--------------------------------acatatatatatatgtaacaaacctgcaccttgtgcacctgtaccctagaacttaaagtataattttaaaaaaagaaaaaCTA i chlSab2.chr2 C 0 I 14 a score=2548.000000 s hg38.chr21_KI270874v1_alt 11018 1 + 166743 A s panTro4.chr21 3623734 1 + 32799110 A i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16877852 1 + 48394510 A i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4389417 1 + 32716333 A i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168504544 1 - 198365852 A i rheMac3.chr3 N 0 C 0 s macFas5.chr3 162167416 1 - 192294377 A i macFas5.chr3 I 14 C 0 s papAnu2.chr3 150851857 1 - 180432695 a i papAnu2.chr3 I 9 C 0 s chlSab2.chr2 14952890 1 - 90373283 A i chlSab2.chr2 I 14 C 0 a score=14576.000000 s hg38.chr21_KI270874v1_alt 11019 6 + 166743 AATAAA- s panTro4.chr21 3623735 6 + 32799110 AATAAA- i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16877853 6 + 48394510 AAGAAA- i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4389418 6 + 32716333 AATAAA- i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168504545 6 - 198365852 AATAAA- i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162167417 6 - 192294377 AATAAA- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150851858 6 - 180432695 aataaa- i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14952891 6 - 90373283 AATAAA- i chlSab2.chr2 C 0 C 0 s mm10.chr16 78087852 7 + 98207768 AATAAAG i mm10.chr16 N 0 C 0 a score=-3211.000000 s hg38.chr21_KI270874v1_alt 11025 6 + 166743 TCCTT-A s panTro4.chr21 3623741 6 + 32799110 TCCTT-A i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16877859 5 + 48394510 TCCTT-- i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4389424 5 + 32716333 TCTTT-- i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168504551 7 - 198365852 TCCTGAA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162167423 7 - 192294377 TCCTGAA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150851864 7 - 180432695 tcctgaa i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14952897 7 - 90373283 TCCTGAA i chlSab2.chr2 C 0 C 0 s mm10.chr16 78087859 5 + 98207768 TCACT-- i mm10.chr16 C 0 C 0 s canFam3.chr31 13777777 6 + 39895921 TCATGA- i canFam3.chr31 N 0 C 0 a score=586182.000000 s hg38.chr21_KI270874v1_alt 11031 196 + 166743 AAAAAATAAAAACCAAAATATGTATAAGAGAAGTATGGAAATAAATTCCTGTAGGAGAAAAGGTATTGTGTAAACTAACT---GAATTATATTGTGCAACCTAGCTGAATTAAACATTAATTTTTT-GACTAACTGTTACTCTAACTATTGTAGCTCACATATTACAAT---AATTTCTGGCTGCTTTTAA-----ACTACA----TATATG s panTro4.chr21 3623747 196 + 32799110 AAAAAATAAAAACCAAAATATGTATAAGAGAAGTATGGAAATAAATTCCGGTAGGAGAAAAGGTATTGTGTAAGCTAACT---GAATTATATTGTGCAACCTAACTGAATTAAACATTAATTTTTT-GACTAACTGTTACTCTAACTATTGTAGCTCACATATTACAAT---AATTTCTGGCTGCTTTTAA-----ACTACA----TATATG i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16877864 193 + 48394510 AAAAATTAAAAACCAAAATATGTATAAGAGAAGTATGGAAATAAATTCCGGTAGGAGAAAAGGTATTGTGTAAGCTAACT---GAATTACATTATGCAATCTAACTGAATTAAACATTAATTTGTT----TGACTGTTACTCTAACTATTGTAGCTCACAAATTACAAT---AATTTCTGGCTGCTTTTAA-----GCTACA----TATATG i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4389429 191 + 32716333 AAAAATTAAAAACCAAAATATGTATAAGAGAAGCAAGGAAATAAATTCTGGTGGGAGAAAAGGTATTGTGTAAGCTTACT---GAATTACATTGTGTAACCTAACTGAATTAAATATTAATTTTTT----TGACTA--ACTCTAACTATTGTAGCTCACAAATTACAAT---AATTTCTGGCTGCTTTTAA-----ACTACA----TATATG i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168504558 197 - 198365852 AAAAATTAAAATCCAAAATATCTATAAGAGAAGTATGGAAATAAATTCCGGTAGGAAAAAAGCTATTGTGTAAGCTAACT---GAATTATATTGTGTAACCTAAATGAATTAAATATTAATTTTTTTGACTAACTCTTACTCTAACTACTGTAGCTCACAAATTACAAT---AATTTCTGGCTGCTTTTAA-----ACTACA----TATATG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162167430 197 - 192294377 AAAAATTAAAAACCAAAATATCTATAAGAGAAGTATGGAAATAAATTCCGGTAGGAAAAAAGCTATTGTGTAAGCTAACT---GAATTATATTGTGTAACCTAAATGAATTAAATATTAATTTTTTTGACTAACTCTTACTCTAACTACTGTAGCTCACAAATTACAAT---AATTTCTGGCTGCTTTTAA-----ACTACA----TATATG i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150851871 197 - 180432695 aaaaattaaaaaccaaaatatctATAAGAGAAGTATGGAAATAAATTCCGGTAGGAAAAAAGGTATCATGTAAGCTAACT---GAATTATATTGTGTAAcctaaatgaattaaatattaatttttttgactAACTCTTACTCTAACTATTGTAGCTCACAAATTACAAT---aatttctggctgcttttaa-----acTACA----TATATG i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14952904 206 - 90373283 AAAAATTACAAACCAAAATATCTATGAGAGAAGTATGGAAAAAAATTCCAGTAGGAAAAAAGGTATTGTGTAAGCTAACT---GAATGATATTGTGTAACCTAAATGAATTAAATAATAATTTTTTTGACTAACTCTTTCTCTAACTATTGTAGCTCACAAATTACAAT---AATATCTGACTGCTTTTAACTATGATCATATGATTATATG i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21879383 188 + 50472720 aaaaattcaaaaCAACAATATGTATCAGAGCTGTATGGAAATAAATTCTGGTAGGAGAAAAAGCATTGTGTAAGCTAACT---GA-----ATTGTGTAACCTA-CTGGATTAAATATTAATTTTTT-TACTAACTC--AATTTAATTATTGTATCTCACAAATTACAAT---AATTTCTGGCTGCTTTTAG-----ACAATA----TATATG i calJac3.chr21 N 0 C 0 s mm10.chr16 78087864 177 + 98207768 GTAAATtatatatatatatatatataATTGATAACTCCAATAAAATTTCTTTTGGAGGAAAA-TGGTCTACGGGCTAATTAAGGAAATATAT---------------------ATATTAGTTTTCTAGATTAAGTCCTAGT----CTGTTATAGTTTTAAAATAACAATAACAATAACTACTTGCTTCTAA-----AATATA----AATGTA i mm10.chr16 C 0 C 0 s canFam3.chr31 13777783 181 + 39895921 AATACATTAAGACAAAAA----TGTAACTGAAATATTAAAATAAATTCCTGTAGAAGAAAAA-TATTCTGTAAGCCAAGT---GAATTATTTGGATTTACT-------AGTAAATATCAATTCTTTTGACTAACCCCTGCT----CTACTATAGCTGACAAATTATAAT---ACCCTCTTACCACTTTTAA-----AATACA----TGTGTG i canFam3.chr31 C 0 I 234 a score=87251.000000 s hg38.chr21_KI270874v1_alt 11227 24 + 166743 ATTCTGATAGAAGGAGAAACTTTC s panTro4.chr21 3623943 24 + 32799110 ATTCTGATAGAAGGAGAAACTTTC i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16878057 24 + 48394510 ATTCTGATAGAAGGAGAAACTTTC i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4389620 24 + 32716333 ATTCTGATAGAAGGAGAAACTTTC i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168504755 24 - 198365852 ATTCTGATAGAAGGAGAAACTTTC i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162167627 24 - 192294377 ATTCTGATAGAAGGAGAAACTTTC i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150852068 24 - 180432695 ATTCTGATAGAAGGAGAAACTTTC i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14953110 24 - 90373283 ATTCTGATAGAAGGAGAAACTTTC i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21879571 24 + 50472720 ATTCTAATGGAAAAAGAAACtttc i calJac3.chr21 C 0 I 301 s mm10.chr16 78088041 24 + 98207768 CTTCCAATCAAAGAAGATACTTTC i mm10.chr16 C 0 C 0 e canFam3.chr31 13777964 234 + 39895921 I a score=18006.000000 s hg38.chr21_KI270874v1_alt 11251 5 + 166743 TGACA s panTro4.chr21 3623967 5 + 32799110 TGACA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16878081 5 + 48394510 TGACA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4389644 5 + 32716333 TGACA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168504779 5 - 198365852 TAACA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162167651 5 - 192294377 TAACA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150852092 5 - 180432695 TAACA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14953134 5 - 90373283 TAACA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21879896 5 + 50472720 TAACA i calJac3.chr21 I 301 C 0 s mm10.chr16 78088065 5 + 98207768 TAACA i mm10.chr16 C 0 I 14 e canFam3.chr31 13777964 234 + 39895921 I a score=661395.000000 s hg38.chr21_KI270874v1_alt 11256 250 + 166743 TAAATAcaggttacccttaagcaacatgggttttaactgggtgcgtccaattagacatggaattttttttcaaccaaacacagatggaaaatacagccttcgtgggatgtaaaacctgcgca----tacagaaagccaaatttttatatatacagattccacagggccaagtgtgaggcttcaccatgcataggtttgggtatttgtggacgtcctggtaccactgccctgcgtatactgaaggtcgactgTAC-- s panTro4.chr21 3623972 250 + 32799110 TAAATAcaggttacccttaagcaacatgggttttaactgggtgcgtccaattagacacggaattttttttcaaccaaacacagatggaaaatacagccttcatgggatgtaaaacctgcgca----tacagaaagccacctttttatatatacagattccacagggccaagtgagaggcttcaccatgcataggtttgggtatttgtggacgtcctggtaccactgccctgcgtatactgaaggtcaactgTAC-- i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16878086 250 + 48394510 TAAATAcagatgacccttgagtaacatgggttttaactgcgtgtgtccaattagacacggatttttttttcaaccaaacacagatggaaaatacagccttcctgggatgtaaaacctgtgca----tacagaaagccaactttttatatacacagattccacagggccaagtgtgagacttcaccgtgcataggtttgggtatttgtggacgtcctggtaccactgccctgcgtatactgagggtcgactgTAC-- i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4389649 249 + 32716333 TAAATAcagatgacccttgagcaacatgggttttaactgcatgcgtccaattagacacgga-ttttttttcaagcaaacacagatggaaaatacagccatcctgggatgtaaaacctgcgca----tacagaaagccaactttttatatacacagattccacagggccaagtgtgagacttcaccatgcatagatttgggtatttgtggacgtcctggtaccaccgccccgtgtatactgagggtcgactgTAC-- i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168504784 249 - 198365852 TAAATAGagatgacccttgagcaacatgta-tttgactgcacacgtccaattagacatggatttttttttcaaccaaatacagattgcacatacagccttcctggggtgtaaaacctgcaca----tctggaaagccaactttttctatacacagattccacagggccaagtgtgagacttcaccatgtataggtttgggtctacgtggaagtcctggtaccactgccccgcccgtactgagggtcgagtgTAC-- i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162167656 251 - 192294377 TAAATAGagatgacccttgagcaacatgta-tttaactgcacacgtccaattagacatggatttttttttcaaccaaatacagattgcacatacagccttcctggggtgtaaaacctgcaca----tctggaaagccaactttttctatacacagattccatagggccaagtgtgagacttcaccatgtataggtttgggtctacgtggaagtcctggtaccactgccccgcccgtactgagggtcgagtgTACTA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150852097 249 - 180432695 TAAATAGAGATGACCCTTGAGCAACATGGG-TTTAACTGCACATATCCAATTagacatggatttttttttcaaccaaacacaGATCGCAAATACAGCCTTCCTGGGGTGTAAAACCTGCACA----TCTGGAAAGCCAACTTTTTCTATACACAGATTCCACAGGGCCAAGTGTGAGACTTCACCATGTATAGGTTTGGGTCTACGTGGAAGTCCTGGTACCACTGCCCCGCCTGTACTGAGGGTCGAGTGTAC-- i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14953139 249 - 90373283 TATATAGagatgacccttgagcaacatggg-tttaactgcacacatccaattagacacggatttttttttcaaccaaacacagattgcaaatacagccttcctggggtgtaaaacctgcaca----tctggaaagccaactttttctatacacaaattccacatggtcaagtgtgagacttcaccaggtataggtttgggtatacgtggaagtcctggtaccactgcccctcctatactgagggtcgagtgTAC-- i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21879901 252 + 50472720 TAAATATagatgacccttgagcaacatgggttttaactgcatgtgtccaaatagacatgaa--tttttttcaatcaaacacagattgaaaatatgatcttcctgggatgtaaaacctgtacatatttccatattcccaactttttacatacacatattccacacggccaagtgtgggacttcaccaggcatcagtttgggtatacacggaagtcctggtaccaccgccctgtatataccgagggtcgactATAC-- i calJac3.chr21 C 0 C 0 e canFam3.chr31 13777964 234 + 39895921 I e mm10.chr16 78088070 14 + 98207768 I a score=26065.000000 s hg38.chr21_KI270874v1_alt 11506 9 + 166743 TATGCATGA s panTro4.chr21 3624222 9 + 32799110 TATGCATGA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16878336 9 + 48394510 TACGCATGA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4389898 7 + 32716333 TA--CACGA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168505033 9 - 198365852 TATGCATGA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162167907 9 - 192294377 TATGCATGA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150852346 9 - 180432695 TATGCATGA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14953388 9 - 90373283 TATGCATGA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21880153 9 + 50472720 TATGCATGA i calJac3.chr21 C 0 C 0 s canFam3.chr31 13778198 9 + 39895921 TATACTTGG i canFam3.chr31 I 234 C 0 e mm10.chr16 78088070 14 + 98207768 I a score=3340397.000000 s hg38.chr21_KI270874v1_alt 11515 879 + 166743 GAGACTTCCACTTTAAAATGGCA-----------TCTGGTG------------------ATATCCAAATTCCCCACAAAAGCATTTGTAAATACTCTGAAAA-ATGCAAAAATGTACAATGCTACAAAAATTTGGTCTGCAAGAATGTATTTACTTACTTACCTAAGGAAACCAAA---TTGAAAAATGAAATAAG-----------TAGCC--TTCCATGCCCTATTTGCCTG-AAAATATGTCTTTGG--------TTCTCCT-CAAAC--TTCACCCAAGTGCCATGGGAAACAGCACAGGACAACAGCTAAGAGTAAAGACTCTGGAGTGAGGCTGTGCTTGTAAGCATGAATCAGGTGCATTCGAGGTTGACATCCTGGTTTTATGGCAACTTGGTGCAAACACCAATGATACTA-TTTTTACAGAAGGTTAGAGAGGGGAGAAAAGAGAATTCATAGGCCCTTGAATATTTTCTACATATGGAAACAAATGACACATATTGTCTGGCTAACCAAAACCCAAAAGTTAAAAACAAAATATACATCTTTAAGGGTTAGAGAAAAGGAAAC--AGATAGGAATAGCCTTAGGAATTCAAAATTGGAGGAACAATGTAGATCATTGTGAGGTGGCTTCTTTTTTAGCAGTTAATTTGGATACATTAATCATAATCAACTCTCTTTAATCAGAAATT-GGGATTTCCTGAGGAC-TTTTCATTAATTGCAAACCAGAGCAGTAGGCAAATTATTCTTCACTGCAGATCAGAGTATTCCTTTGTGGGTTATGTTCGTAT----CCCACAGAATGAAGTTCAAATAGAATTTTTACTGAATTTTGCTATCATATTACCACACATCCCCCATTAATTCATTACTGCTAATAGAATACATGTGTGTTCCTCAAATGGTAGACCATGAAATGACTGAGCTAATGAGTAAA s panTro4.chr21 3624231 879 + 32799110 GAGACTTCCACTTTAAAATGGCA-----------TCCGGTG------------------ATATCCAAATTCCCCACAAAAGCATCTGTAAATACTCTGAAAA-ATGCAAAAATGTACAATGCTACAAAAATTTGGTCTGCAAGAATGTATTTACTTACTTACCTAAGGAAACCAAA---TTGAAAAATGAAATAAG-----------TAGCC--TTCCATGCCCTATTTGCCTG-AAAATATGTCTTTGG--------TTCTCCT-CAAAC--TTCACCCAAGTGCCGTGGGAAACAGCACAGGACAACAGCTAAGAGTAAAGACTCTGGAGTGAGGCTGTGCTTGTAAGCATGAATCAGGTGCATTCGAGGTTGACATCCTGGTTTTATGGCAACTTGGTGCAAACACCAATGATACTA-TTTTTACAGACGGTTACAGAGGGGAGAAAAGAGAATTCATAGGCCCTTGAATATTTTCTACATATGGAAACAAATGACACATATTGTCTGGCTAACCAAAAGCCAAAAGTTAAAAACAAAATATACATCTTTAAGGGTTAGAGAAAAGGAAAC--AGATAGGAATAGCCTTAGGAATTCAAAATTGGAGGAACAATGTAGATCATTGTGAGGTGTCTTCTTTTTTAGCAGTTAATTTGGATACATTAATCATAATCAACTCTCTTTAATCAGAAATT-GGGATTTCCTGAGGAC-TTTTCATTAATTGCAAACCAGAGCAGTAGGCAAATTATTCTTCACTGTAGATCAGAGTATTCCTTTGTGGGTTATGTTCGTAT----CCCACAGAATGAAGTTCAAATAGAATTTTTACTGAATTTTGCTATCATATTACCACACATCCCCCATTAATTCATTACTGCTAATAGAATACATGTGTGTTCCTCAAATGGTAGACCATGAAATGACTGAGCTAATGAGTAAA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16878345 879 + 48394510 GAGACTTCTACTTTAAAATGGCA-----------TCTAGTG------------------ATATCCAAATTCCCCACAAAAGCATTTGTAAATACTCTGAAAA-ATGCAAAAATGTATAATGTTACAAAAATTTGGTCTGCGAGAATGTATTTACTTACTTACCTAAGGAAACCAAA---TTGAAAAATGAAATGAG-----------CAGGC--TTCCATGCCCTATTTGCCTG-AAAATATGTCTTTGG--------TTCTTCT-CAAAC--CTCACCCAAGTGCCATGGGAAACAGCACGGGACAACAGCTGAGAGTTAAGACTCTGGAGTGAGGCTGTGCTTGTAAGTATGAATCAGGTGCATTCAAGGTTGACATCCTGGTTTTATGGCAACTTGGTGCAAACACCAATGACACTA-TTTTTACAGAAGGTTAGAGAGGGGAGAAAAGAGAATTCATAGGCCCTTGAATATTTTCTACATATGGAAACAAATGACACATATTGTCTGGCTAACCAAAAGCCAAAAGTTAAAAACAAAATATATATCTTTAAGGGTTAGAGAAAAGGAAAC--AGATAGGAATAGCCTTAGGAATTCAAAATTGGAGGAACAATGTAGATCATTGTGAGGTGGCTTCTTTTTTAGCAGTTAATTTGGATACATTAATCATAATCAACTCTCTTTAATCAGAAATT-GGGATTTCCTGAGGAC-TTTTCACTAATTGTAAACCAGAGCAGTAGGCAAATTGTTCTTCACTGTAGATCAGAGTATTCATTTGTGGGTTATGTTTGTAT----CCCACAGAATGAAGTTCAAATAGAATTTTTACTGAATTTTGCTATCATATTACCACACATCCCCTACTAATTCATTCCTGCTAATAGAATACATGTGTGTTCCTCAAATGGTAGACCATGAAATGACTGGGGTAATGAGTAAA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4389905 877 + 32716333 GAGACTTCTACTTTAAAATGGCA-----------TCTAGTG------------------ATATTCAAATTCCTCACAAAAGCATTTGTAAATACTCTGAAAA-ATGCAAAAATGTATAATGCTACAAAAATTTTGTCTGCAAGAATGTATTTACTTACTTACCTAAGGAAACCAAA---TTGAAAAATGACATGAG-----------TAGCC--TTCCATGCCCTATTTGCCTG-AAAACATGTCTTTGG--------TTCTCCT-TAAAC--TTCACCCCAGTGCCATGGGAAacagcacaggacaacagctaagagtaaagactctggagtgaggctgt--ttgTACGTATGAATCAGGTGCATTCGAGGTTGACATCCTGGTTTTATGGCAACTTGGTGCAAACATCAATGATACTA-TTTTTACAGAAGGTTAGAGAGGGGAGAAAAGAGAATTCATAGGCCCTTGAATATTTTCTACATATGGAAACAAATGACACATATTGTCTGGCTAACCAAAAGCCAAAAGTTAAAACCAAAATATACATCTTTAAGGATTAGAGAAAAGGAAAC--AGATAGGAATAGCCTTAGGAATTCAAAATTGGAGGAACAACGTAGATCATTGTGAGGTGGCTTCTTTTTTAGCAGTTAATTTGGATACATTAATCATAATCAACTCTCTTTAATCAGAAATT-GGGATTTCCTGAGGAC-TTTTCATTAATTGCAAACCAGAGCAGTAGGCAAATTATTCTTCACTGTAGATCAGAGTATTCCTTTGTGGGTTATGTTCGTAT----CCCACAGAATGAAGTTCAAATAGAATTTTTACTGAATTTTGCTATCATATTACCACACATCCCCCATTAATTCATTACTGCTAATAGAATACATGTGTGTTCCTCAAATGGTAGACCATGAAATGACTGAGCTAATGGGTAAA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168505042 875 - 198365852 GAGATTTCTGCCTTAAAATGGCA-----------TCTGATG------------------ATTCCCAAATTCCCCACAAAAGCATTTGTAAATACTCTGGAAA-ATGCAAAAATGTATAATGCTACAAAAATTTGGTCTGCACAAATGTATTTACTTAC----CTAAGGAAACCAAA---TTGAAAAATGAAATGAG-----------TAGCC--CTCCATGCAGTATTTGCCTG-AAAATATGTCTTTGG--------TTCTCCT-CAGAC--CTCACCCAAGTGCCATGGGAAATAGCACAGGGGAACGGCTAAGAGCAAAGACCCTGGAGTAAGGCTGTGCTCGTAAGTATGAATCAGATGCATTCGAAGTTGACATCCTGGTTTTATGGCAACTTGGTGCAAACACCAGTGATACTA-TTTTTACAGAAGGTTAGAGGGGGGAGAAAAGAGAATTCATAGGCCCTTGAATATTTTCTACATGTGGAAACAAATGACAAATATTGTCTGGCTAACTAAAAGCCAAAAGTTAAAACCAAAATATACATGGTTAAGGATTAGAGAAAAGGAAAC--AGATAGGAATAGCCTTAGGAATTCAAAATTAGAGGAACAATGTAGATCACTGTGAGGTGGCTTCTTTTTTAGCAGTTAATTTGGATACATTAATCATAATCAACTCTTTTTAATCAGAAATT-GGGATTTCCTGAGGAC-TTTTCATTAATTGCAAACCAGAGCAGTAGGCAAATTATTCTTCACTGTAGATCAGAGTATTCCTTTGTGGGTTATGTTCGTAT----CCCACAGAATGAAGTTCAAATAGAATTTTTACTGAATTTTGCTATCACATTACCACACATCCCCCATTAATTCATTACTGCTAATAGGATACATGTGTGTTCCTCAAATGGTAGCCCATGAAATGACTGAGCTAATGAGTAAA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162167916 875 - 192294377 GAGATTTCTGCCTTAAAATGGCA-----------TCTAATG------------------ATTCCCAAATTCCCCACAAAAGCATTTGTAAATACTCTGGAAA-ATGCAAAAATGTATAATGCTACAAAAATTTGGTCCGCACAAATGTATTTACTTAC----CTAAGGAAACCAAA---TTGAAAAATGAAATGAG-----------TAGCC--CTCCATGCAGTATTTGCCTG-AAAATATGTCTTTGG--------TTCTCCT-CAGAC--CTCACCCAAGTGCCATGGGAAATAGCACAGGGGAACGGCTAAGAGCAAAGACCCTGGAGTAAGGCTGTGCTCGTAAGTATGAATCAGATGCATTCGAAGTTGACATCCTGGTTTTATGGCAACTTGGTGCAAACACCAGTGATACTA-TTTTTACAGAAGGTTAGAGGGGGGAGAAAAGAGAATTCATAGGCCCTTGAATATTTTCTACATGTGGAAACAAATGACAAATATTGTCTGGCTAACTAAAAGCCAAAAGTTAAAACCAAAATATACATGGTTAAGGATTAGAGAAAAGGAAAC--AGATAGGAATAGCCTTAGGAATTCAAAATTAGAGGAACAATGTAGATCACTGTGAGGTGGCTTCTTTTTTGGCAGTTAATTTGGATATATTAATCATAATCAACTCTTTTTAATCAGAAATT-GGGATTTCCTGAGGAC-TTTTCATTAATTGCAAACCAGAGCAGTAGGCAAATTATTCTTCACTGTAGATCAGAGTATTCCTTTGTGGGTTATGTTCGTAT----CCCACAGAATGAAGTTCAAATAGAATTTTTACTGAATTTTGCTATCACATTACCACACATCCCCCATTAATTCATTACTGCTAATAGGATACATGTGTGTTCCTCAAATGGTAGCCCATGAAATGACTGAGCTAATGAGTAAA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150852355 879 - 180432695 GAGATTTCTGCCTTAAAATGGCA-----------TCTAATG------------------ATTCCCCAATTCCCCACAAAAGCATTTGTAAATActctggaaa-atgcaaaaatgtatAATGCTACAAAAATTTGGTCTGCATGAATGTATTTACTTACTTATCTAAGGAAaccaaa---ttgaaaaatgaaatgag-----------taGCC--CTCCATGCAGTATTTGCCTG-AAAATATGTCTTTGG--------TTCTCCT-CAGAC--CTCACCCAAGTGCCATGGGAAATAGCTCAGGGGAACGGCTAAGAGCAAAGACCCTGGAGTAAGGCTGTGCTCGTAAGTATGAATCAGATGCATTCGAAGTTGACATCCTGGTTTTATGGCAACTTGGTGCAAACACCAGTGGTACTA-TTTTTACAGAAGGTTAGAGGGGGGAGAAAAGAGAATTCATAGGCCCTTGAATATTTTCTACATGTGGAAACAAATGACAAATATTGTCTGGCTAACTAAAAGCCAAAAGTTAAAACCAAAATATACAGGGTTAAGgattagagaaaaggaaac--agatagGAATAGCCTTAGGAATTCAAAATTAGAGGAACAATGTAGATCACTGTGAGGTGGCTTCTTTCTTAGCAGTTAATTTGGATACATTAATCATAATCAACTCTTTTTAATCAGAAATT-GGGATTTCCTGAGGAC-TTTTCATTAATTGCAAACCAGAGCAGTAGGCAAATTATTCTTCACTGTAGATCAGAGTATTCCTTTGTGGGTTATGTTCGTAT----CCCACAGAATGAAGTTCAAATAGAATTTTTACTGAATTTTGCTATCACATTACCACACATCCCCCATTAATTCATTACTGCTAATAGGATACATGTGTGTTCCTCAAATGGTAGCCCATGAAATGACTGAGCTAATGAGTAAA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14953397 853 - 90373283 GAGACTTCTACTTTAAAATGGCA-----------TCTAATG------------------ATTTCCGAATTCCCCACAAAAACCTTTGTAAATACTCTGAAAA-ATGCAAAAATGTATAATGCTACAAAAATTTGGTCTGCATGAATGTGTTTACTTAC----CTAAGGAAACCAAA---TTGAAAAATGAAATGA-----------------------------------CCTG-AAAATATGTCTTTGG--------TTCTCCT-CAGAC--CTCACCCAAGTGCCATGGGAAATAGCACAGGAGAACGGCTAAGAGCAAAGACCCTGGAGTAAGGCTGTGCTTGTAAGTATGAACCAGATGCATTCGAAGTTGACATCCTGGTTTTATGGCAACTTGGCGCAAACACCAGTGATACTA-TTTTTACAGAAGGTTAGAGGGGGGAGAAAAGAGAATTCATAGGCCCTTGAATATTTTCTACATGTGGAAACAAATGACAAATATTGTCTGGCTAACTAAAAGCCAAAAGTTAAAACCAAAATATACATGTTTAAGGATTAGAGAAAAGGAAAC--AGATAGGAATAGCCTTAGGAATTCAAAATTAGAAGAACAATGTAGATCACTGTGAGGTGGCTTCTTTTTTAGCAGTTAATTTGGATACATTAATCATAATCAACTCTTTTTAATCAGAAATT-GGGATTTCCTGAGGAC-TTTTCATTAATTGCAAACCAGAGCAGTAGGCAAATTATTCTTCACTGTAGATCAGAGTATTCCTTTGTGGGTTATGTTCGTAT----CCCACAGAATGAAGTTCAAATAGAATTTTTACTGAATTTTGCTATCACATTACCACACATCCCCCATTAATTCATTACTGCTAATAGGATACATGTGTGTTCCTCAAATGGTAGACCATGAAATGACTGAACTCATGAGTAAA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21880162 855 + 50472720 GAGACTCCTACTTTTAAATGGCA-----------TCTACAG------------------ATTTTCAAATTCCCTGCAAAAGCATTTGTAAATACTCTGTAAA-ATACAAAAATGTATAATGCAACAAAAATTTGGTCTGCAAAAA-----TTACTTAT----CTAAGAAAATCAAATTTTTAAAAAATGAAATAAG-----------TAGCT--CTCCATGCCATATTTGCCTGAAAAATATGTCTTTTG--------TTCTCCTCCAAAC--CTCACTCAAGTGCCATGGGAAACAGCACAGGACAACGATGAAGAGTAAAGACTCTGGAATGAGGCTGTGCTTGTAAGTATGGATCAGGTGCATTTGAAATTGACATCCTGGTTTTATAGCAACTTGGTGCAAACACCAGTGATACTA-TTTTTACAGAAGGTTAGAGAGGGGAGAAAAGAGAATTTATAGGCCCTTGAATATTTTGGACATATGGAAACAAATGACAAACATTGTCTAGCTAACCA-------------AAAACCAAAATATATGTCTTTAAGGATTAGAGAAAAGGAAATCAAAATGGG---------AGGAATTCAAAATGGGAGGAACGATGTAGATCATTGTGAGGTGTTTTTTTTTCCAGCAGTTAATTTGGATACATTAATCATAATCAACTCTCTTTCATCAGAAATT-GGGATTTCCTGAGGAC-TTTTCATTAATTGCAAGCCAGAGCAGTAGGCAAATTATTCTTCACTGTAGATCAGAGTATTCCTTTGTGGGTTATGTTCGAAT----CCCACAGAATTAAGTTCAAATAGAATTTTTACTGAATTTTGCTATCATATTGCCACACATCCCCCATTAATTCATTACTGCTAATAGAATACATATGTGTTCCTAAAATGGTAGACCATGAAATGACTGAGCTAATGAGTAAA i calJac3.chr21 C 0 C 0 s mm10.chr16 78088084 860 + 98207768 GAGATTTTCAGTTTAAAATGACAGTTTAGCAAAGTCTGATG---------------AACATTCCTGAATTTTCTATGAATATCTTTGCAAATCCCCTAAAAAGATGTGACTATTTATAACATACCAAAAATCC--CCTACAAAAAGTCACTTCCTCAT-----TAAGGGACTCAAA---TTTAAAAagagagagagagagagagagagagCCATTTCTGTGCCATATCTTCCTA-GAAATATGCCTTTGGATCCACCTTTCCACT-TGAACATTTTAGGTCAGTGCCATGGGCAGAGGCACAGCACAGTGGCCAAGTGCAAAGAC---------GGTCTGGATTTATA---------CAGTCACATTC-------ATATCCGGGGTTCA-------------CAGACAC--ATTATGCTA-ATTTTTGAGATAATTAGAAA--GGAGAAAAGCAAATTATTGAGACCTTGAATAATTCCTACATCCAAAAATAAAGAACTGCCGTTGTCCCAATAGCCAAAAGTCAAATTTTTACACACAAATGTGCATCATTAAGAATAAGAGAGGAGGGCAC--A-----GTGCAGCCTCCGCAGCCTGAG---GGAGGGGCAATGACGCTTGTTCTGAGGTGCATTCAATTTTAGTAGTTAATTTGG-CACATTAATCATAATCAACTCTCCTTAATCAGAAATTGGGGGTTTCCTGGGGACTTTTTCTTTAATTGTAAACTAGAATAGTGTATAAATTATTCTTTACTGTAGATCACAGTACCTCTTTG-GGGTTGTGCTTCTATATACCCCTCCAAATTAAATTCAAATAGAACTGTTATCGAATCTTGCTATTTTATTACCATGCGACACTTGTTAATTAATTGCTGCTAATAGGATA----TGCATAACCTTAACGGCATACCATGAAACAGCTAAGCTAACGAGCACA i mm10.chr16 I 14 I 189 s canFam3.chr31 13778207 877 + 39895921 AAGGcttccagtttaaaacagca-----------tccagttaacagactttgatgcaacatttctaaatttcccacatatatatctgtaagtagcctgaaaa-aTGCAAGAA--CATAATGCTACAAAAATTTGGTCTGCAAGAATTTACTTAGTTAC-----TTAGAGAGCTAAA---TTGAGAAAGGAAA-GAG-----------TAGCC--CTCCATGCCATATCTGCCTG-AGAATATGTCTTTAG--------TTCCAC--CAAAG--TTCAACCAAGTATCAAGGAAAGCAAAACAGTGCAATGGCT--GAGTAAGTACTCTTGAGTGAGGCAGTGCTTGTAAGGTTAGACCAAG-ACATATGAAGTTGACACCCTGGATT-ATGCAAGCTTACTGAAAACACCAGTTACACTATTTTTTAGAGAAGGATGGAAAAGAGAGAAAAGAAAATTCATATGGCCTTGAATATTTTCTACAAGCAGAAACAAAGGACAATTGTTGTCTTGCTAATCA--------AAGTTAAAAACCAAATATACATCTTTAAGAATTAAAGAAAAAAGCAC--AGATATGAATAGCCTTAGGAATTTAAAATTGAAGGAACAATGTAGATAATTATGAGGTGGCTTCCTTTTTGGCAGTTAATTTGGATACATTAATCATAATCAACTCTCTTTAATCAGAAATT-GGGATTTCCTGAGGAC-TTTTCATTAATTGCAAACCAGAGCGGTAGGCAAATTATTCTTCACTGTAGATCAGAGTACTCCTTTGTGGGTTATGTTCATAT----CCCACAGAATTAAGTTCAAATAGAATTTTTACTGAATTTTGCTATCATATTACCACACATTCCCCATTATTTCATTATTGCTAATAGGAAACATATGTATCCTTAAAATGGTATACCATGAAATGACTGAACTAATGAATAAA i canFam3.chr31 C 0 C 0 a score=3713621.000000 s hg38.chr21_KI270874v1_alt 12394 995 + 166743 ACTGA--------------------GCTTCTACAGGTATAGCTGGGAGCATGCAGGGGAATGGTATA-AGGGCTGTTGTTCTATTCAGCACAGAAGCAGTTAAGTCAGCTTCATATTCTCCTCTATTTTGCACTGGCTTTTAATGACATTAAATCAAATTATATTTTCTTAGAAGATTTAATGTTTAGCTTTTCTAATTTTACCTTCATAATGAAATTGTAGTAGGGCTGTGTGCAGTCATTTGGATAAAATTGAAAGTGCCATCAGTTATACACTCTAAACGAAATAGCAGCCT-TTTTGTTTAACTTTAGTTAATGGTCTTATAGTTTCACATAAAAACTTTCTACCTCCTCTGTTGGAATTTGACTACAAGCTTTGAAACTACAAGCAAAGTTGCTTATCACAAATGGAGAATTCCCAGAAACAAAAGCTTA-TCTTAATGCAATTATTCAAATTA----AAATGTTTGCATTTGA--TGACACACATA--TTTGAGGACAATCGCCCACCTTTTTTAT-GTTTACATT---TAGTAATTCATGTCCTTTCTGTTTCAAGG-CAGCTTCACTGGTACAGTGGTTTCCAGAATCACTTCTCACTTCCATTATGAACTTCTTAAAAACTCAGTAAGAGGAGCAGCCTTACG-----------CAGAGAAAGGCACCAGTGTGAAACTCACTGACC--------AAAATG-TTTTTCAGG---TTCTGAAGCTACTAAGCAGACATCATTGCCCAAATTC-TTAAGTTCTCCAAGGCTCTTGTTTCTTCAACTATGAGACTAAGTACCAATAGTAATTATTAGTGATGTTGTTACTGTCATTCTGAAaataatagtaagtagctaatatttactgggtattt-gccatgtgtcacattgtgagctgggcacttgtctctgtaagatctcatttcattaccgtgagagctttatatacagtc--aatgatttcttcattt-tactgatgaagatattgaggttcagagaggtttggaaatttatgtaagctctcacagctagcaaaggtcataaccagaa s panTro4.chr21 3625110 996 + 32799110 ACTGA--------------------GCTTCTACAGGTATAGCTGGGAGCATGCAGGGGAATGGTATA-AGGGCTGTTGTTCTATTCAGCACAGAAACAGTTAAGTCAGCTTCATATTCTCCTCTATTTTGCACTGGCTTTTAATGACATTAAATCAAATTATATTTTCTTAGAAGATTTAATGTTTAGCTTTTCTAATTTTACCTTCATAATGAAATTGTAGTAGGGCTGTGTGCAGTCATTTGGATAAAATTGAAAGTGCCATCAGTTATACACTCTAAACGAAATAGCAGACT-TTTTGTTTAACTTTAGTTAATGGTCTCATAGTTTCACATAAAAACTTTCTACCTCTTCTGTTGGAATTTGACTACAAGCTTTGAAACTACAAGCAAAGTTGCTTATCACAAATGGAGAATTCCCAGAAACAAAAGCTTA-TCTTAATGCAATTATTCAAATTA----AAATGTTTGCATTTGA--TGACACACATA--TTTGAGGACAATCGCCCAACTTTTTTAT-GTTTACATT---TAGTAACTCATATCCTTTCTGTTTCAAGG-CAGCTTCACTGGTACAGTGGTTTCCAGAATCACTTCTCACTTCCATTATGAACTTCTTAAAAACTCAGTAAGAGGAGCAGCCTTACA-----------CAGAGAAAGGCACCAGTGTGAAAGTCACTGACC--------AAAATG-TTTTTCAGG---TTCTGAAGCTACTAAGCAGACATCATTGCCCAAATTCTTTAAGTTCTCCAAGGCTCTTGTTTCTTCAACTATAAGACTAAGTACCAATAGTAATTATTAGTGATGTTGTTACTGTCATTCTGAAaataatagtaagtagctaatatttactgggtattt-gccatgtgtcacattgtgagctgggcacttgtctctgtaagatctcatttcattacggtgagagctttatatacagtc--aatgatttcttcattt-tactgatgaagatattgaggttcagagaggtttggaaatttatgtaagctctcatagctagcaaaggtcataaccagaa i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16879224 995 + 48394510 AGTGA--------------------GCTTCTACAGGTATAGCTGGGAGCATGCGGGGGAATGGTATA-AGGGCTGTTGTTCTATTCAGCACAGAAGCAGTTTAGACAGCTTCATATTCTCCTCTATTTTGCACTGGCTTTTAATGACATTAAATCAAATTATATTTTCTTAGAAGATTTAATGTTTAGCTTTTCTAATTTTACCTTCATAATGAAATTGAAGTAGGGCTGTGTGCAGTCATTTGGATAAAATTGAAAGTGCCATCAGTTATACACTCTAAATGAAATAGCAGCCT-TTTTGTTTAACTTTAGTTAATGGTCTCATAGTTTCACATAAAAACTTTCTACCTCTTTTGTTGGAATTCAACTACAAGCTTTGAAACTACAAGCAAAGTTGCTTATCACAAATGGAGAATTCCCAGAAACAAAAGCTTA-TCTTAATGCAATTATTCAAATTA----AAATGTTTGTATTTGA--TGACACACATA--TTTGAGGACAATCGCCCACCTTTTTTAT-GTTTACATT---TAGTAATTCATGTCCTTTCTGTTTCAAAG-CAGCTTCACTGGTACAGTGGTTTCCAGAATCACTTCTCACTTCCATTATGAACTTCTTAAAAACTGAGTGAGAGGAACAGCCTTACG-----------CAGAGAAAGGCACCA-TGTGAAAGTCACTGACC--------AAAATG-TTTTGCAGG---TTCTGAAGCTACTAAGCAGACATCATTGCCCAAATTCTTTAAGTTCTCCAAGGCTCTTGTTTCTTCAACTATAAGACTAAGTAGCAATAGTAATTATTAGTGATGTTATTACTGTTATTCTGAAAATaacaataagtagctaatatttactgggtattt-gccatgtgtcactttgtgagctgggcacttgtctctataagatctcatttcattaccgtgagagctttatatacggtc--aatgatttcctcattt-tactgatgaagatattgaggttcagagaggtttagaaatttatgtaagctctcacagctagcaaaggtcataaccagaa i ponAbe2.chr21 C 0 I 769 s nomLeu3.chr25 4390782 991 + 32716333 AGTGA--------------------GCTTCTACAGGTATAGCTGGGAGCATGCAGGGGAATGGTATA-AGGGCTGTTGTTCTATTCAGCACAGAAGCAGTTAAGTCAGCTTCATATTCTCCTCTATTTTGCACTGGCTTTTAATGACATTAAATCAAATTACATTTTCTTAGAAGATTTAATGTTTAGCTTTTCTAATTTTACCTTCATAATGAAATTGAAGTAGGGCTGTGTGCAGTCATTTGGATAAAATTGAAAGTGCCAACAGTTATACACTCTAAACGAAATAGTAGCCT-TTTTGTTTAACTTTAGTTAATGGTCTCACAGTTTCACATAAAAACTTTCTACCTCTTTTGTTGGAATTTGACTACAAGCTTTGAAACTACAAGCAAAGTTGCTTATCACAAATGGAGAATTCCCAGAAACAAAAGCTTA-TCTTAATGCAATTATTCAAATTA----AAATGTTTGTATTTGA--TGACACACATA--TTTGAGGACAATCGCCCACCTTTTTTAT-GTTGACATT---TAGTAATTCATGTCCTTTCTGTTTCAAGG-CAGCTTCACTGGTATAGTGGTTTCCAGAATCACTTCTCACTTCCATCATGAACTTCTTAAAAACTCAGTGAGAGGAGCAGCCTTACA-----------CAGAGAAAGACACCAGTGTGAAAGTCACTGACC--------AAAATG-TTTTTCAGG---TTCTGAAGCTACTAAGCAGACATCATTGCCCAAATTCTTTAAGTTCTCCAAGCTTCTTGTTTCTTCAACTATAGGACTAAGTACCAATCGTAATTATTAGTGATGTTATTACTGTTATCCTGAAaataacagtaaatagctaatatttactgagtat------atgtgtcacattgtgagctgggcacttgtctctataagatctcatttcattactgtgacagctttatatacagtc--aaggatttcctcattt-tactgatgaagatactgaggtttagagaggtttagaaatttatgtaagctctcacagctagcaaaggtcataaccagaa i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168505917 993 - 198365852 AGTGA--------------------GCTTCTACAGGTACAGCTGGGAGCATGCAGGGGAATGGTGTA-AGGGCTGTTGTTCTATTCAGCACAGAAGCAGTTAAGCGAGCTTCATATTCTCCTCTATTTTGCACTGGCTTTTAATGACATTAAATCAAATTATATTTTCTTAGAAGATTTAATGTTTAGCTTTTCTAATTTTACCTTCATAATGAAATTGAAGTAGGGCTGTGTGCAGTCATTTGGATGAAATTGAAAGTGCCATCAGTTACACACTCTAAACAAAATAGCAGCCT-TTCTGTTTAACTTTAGTAAATGGTCTCATAGTTTCACATAAAAACTTTCTACCTCTTTTGTTGGAATTTGACTAAAAGCTTTGAAACTACAAGCACAGTTGCTTATCACAAATGGAGAATTCCCAGAAACAAAAGCTTA-TCTTAATGCAGTTATTCAAATTA----AAATGTTTGTATTTGA--TGACACACATA--TTCGAGGACAATCGCCCACCTTTTTTAT-GTTTACATT---TAGTAATTCATGTCCTTTCTGTTTCAAGG-CAGCTTCACTGGTACAGTGGTTTCCAGAGTCACTTCTCACTGTCATCATGAACTTCTTAAAAACTCA--Gagaggagcagccttgcg-----------cagagaaaggcaccagtgtgaaagtcagtgacc--------aaaatg-tttttcagg---ttctgaagctactaagcagacatcattgcccaaattctttaa-ttctccaagcctcctgtttcttcaactataaGGTTAAGTACCAATAGTAATTATTAATGATGTTATTACTGTTATTCTGAAaataacagtaagtagctaatatttactgggtattt-gccacgtggcacattgtgagctgggcactggtctctataagatctcatttcattaccatgaaagctttatatacagtc--aatgacttcctcattt-tgctgatgaagatattgagattcagagaggtttagaaatttatgtaagctctcacagctagcaaaggtcagaaccagaa i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162168791 995 - 192294377 AGTGA--------------------GCTTCTACAGGTACAGCTGGGAGCATGCAGGGGAATGGTGTA-AGGGCTGTTGTTCTATTCAGCACAGAAGCAGTTAAGCGAGCTTCATATTCTCCTCTATTTTGCACTGGCTTTTAATGACATTAAATCAAATTATATTTTCTTAGAAGATTTAATGTTTAGCTTTTCTAATTTTACCTTCGTAATGAAATTGAAGTAGGGCTGTGTGCAGTCATTTGGATGAAATTGAAAGTGCCATCAGTTACACACTCTAAACAAAATAGCAGCCT-TTCTGTTTAACTTTAGTAAATGGTCTCATAGTTTCACATAAAAACTTTCTACCTCTTTTGTTGGAATTTGACTAAAAGCTTTGAAACTACAAGCACAGTTGCTTATCACAAATGGAGAATTCCCAGAAACAAAAGCTTA-TCTTAATGCAGTTATTCAAATTA----AAATGTTTGTATTTGA--TGACACACATA--TTCGAGGACAATCGCCCACCTTTTTTAT-GTTTACATT---TAGTAATTCATGTCCTTTCTGTTTCAAGG-CAGCTTCACTGGTACAGTGGTTTCCAGAGTCACTTCTCACTGTCATCATGAACTCCTTAAAAACTCAGTGAGAGGAGCAGCCTTGCG-----------CAGAGAAAGGTACCAGTGTGAAAGTCAGTGATC--------AAAATG-TTTTTCAGG---TTCTGAAGCTACTAAGCAGACATCATTGCCCAAATTCTTTAA-TTCTCCAAGCCTCCTGTTTCTTCAACTATAAGGTTAAGTACCAATAGTAATTATTAGTGATGTTATTACTGTTATTCTGAAaataacagtaagtagctaatatttactgggtattt-gccacgtggcacattgtgagctgggcactggtctctataagatctcatttcattaccatgaaagctttatatacagtc--aatgatttcctcattt-tgctgatgaagatattgagattcagagaggtttagaaatttatgtaagctctcacagctagcaaaggtcagaaccagaa i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150853234 995 - 180432695 AGTGA--------------------GCTTCTACAGGTACAGCTGGGAGCATGCAGGGGAATGGTGTA-AGGGCTGTTGTTCTATTCGGCACAGAAGCAGTTAAGCGAGCTTCATATTCTCCTCTATTTTGCACTGGCTTTTAATGACATTAAATCgaattatattttcttagaaGATTTAATGTTTAGCTTTTCTAATTTTACCTTCATAATGAAATTGAAGTAGGGCTGTGTGCAGTCATTTGGATGAAATTGAAAGTGCCATCAGTTACACACTCTAAACAAAATAGCAGCCT-TTCTGTTTAACTTTAGTAAATGGTCTCATAGTTTCACATAAAAACTTTCTACCTCTTTTGTTGGAATTTGACTAAAAGCTTTGAAACTACAAGCACAGTTGCTTATCACAAATGGAGAATTCCCAGAAACAAAAGCTTA-TCTTAATGCAgttattcaaatta----aaatgtttgtatttga--TGACACACATA--TTCGAGGACAATCGCCCACcttttttat-gtttacatt---tagTAATTCATGTCCTTTCTGTTTCAAGG-CAGCTTCACTGGTACAGTGGTTTCCAGAGTCACTTCTCACTGTCATCATGAACTTCTTAAAAACTCAGTGAGAGGAGCAGCCTTGCG-----------CAGAGAAAGGCACCAGTGTGAAAGTCAGTGACC--------AAAATG-TTTTTCAGG---TTCTGAAGCTACTAAGCAGACATCATTGCCCAAATTCTTTAA-TTCTCCAAGCCTCCCGTTTCTTCAACTATAAGGTTAAGTACCAATAGTAATTATTAGGGATGTTATTACTGTTATTCTGAAAATAACAGTAAGTAGCTAATATTTACTGGGTATTT-GCCACGTGGCACATTGCGAGCTGGGCACTGGTCTCTATAAGATCTCATTTCATTACCATGAAAGCTTTAGATACAGTC--CATGATTTCCTCATTT-TGCTGATGACGACattgagattcagagaggtttaGAAATTTATGTAAGCTCTCACAGCTAGCAAAGGTCAGAACCAGAA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14954250 996 - 90373283 AGTGA--------------------GCTTCTACAGGTACAGCTGGGAGCATGCAGGGGAATGGTGTA-AGGGCTGTTGTTCTATTCAGCACAGAAGCAGTTAAGCGAGCTTCATATTCTCCTCTATTTTGCACTGGCTTTTAATGACATTAAATCAAATTATATTTTCTTAGAAGATTTAATGTTTAGCTTTTCTAATTTTACCTTCATAATGAAATTGAAGTAGGGCTGTGTGCAGTCATTTAGATGAAATTGAAAGTGCCATCAGTTACACACTCTAAACAAAATAGCAGCCT-TTCTGTTTAACTTTAGTAAATGGTCTCATAGTTTCACATAAAAACTTTCTACCTCTTTTGTTGGAATTTGACTAAAAGCTTTGAAACTACAAGCACAGTTGCTTATCACAAATGGAGAATTCCCAGAAACAAAAGCTTA-TCTTAATGCAGTTATTAAAATTA----AAATGTTTGTATTTGA--TGACACACATA--TTTGAGGACAATCGCCCACCTCTTTTAT-GTTTACATT---TAGTAATTCATGTCCTTTCTGTTTCAAGG-CAGCTTCACTGGTACAGTGGTTTCCAGAGTCACTTCTCACTGTCATCATGAACTTCTTAAAAACTCAGTGAGAGGAGCAGCCTTGCG-----------CAGAGAAAGGCACCAGTGTGAAAGTCAGTGACC--------AAAATG-TTTTTCAGG---TTCTGAAGCTACTAAGCAGACATCATTGCCCAAATTCTTTAAGTTCTCCAAGCCTCTTGTTTCTTCAACTATAAGGTTAAGTACCAATAGTAATTATTAGTGATGTTATTACTGTTATTCTGAAaataacagtaagtagctaatatttactgggtattt-gccacgtgtcatattgtgagctgggcactggtctctataagatctcatttcattaccatgagaactttatatacagtc--aacgatttcctcattt-tgctgatgaagatattgagattcagagaggtttagaaatttatgtaagctctcacagctagcaaaggtcagaaccagaa i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21881017 992 + 50472720 AGTGA--------------------GCTTCTACAGGTACAGCTGGGAGCATGTAGGGGAATAGTGCA-AGAGCTGATGTTCTATTCAGCACAGAAGCAGTTAAGCCAGCTCCATATTCTCCTCTATTTTCCACTGGATTTTAATGGCATTAAATCAAATTATATTTTCTTAGAAGATTTAATGTTTAGCTTTTCTAATTTTACCTTCATAATGAAATTGAAGTAGGGCTGTGTGCAGTGATTTGGATAAAATTGAAAATGCCATCAGCTATACACTCTAAACGAAATAGCAGCCT-TTTTGTTTAACTTTTGTAAGTGGTCTCATACTTTCACATAAAAACTTTCTACTGCTTCTCTTGGAATTTGATTACTAGCTTTGAAACTACAAGCAAAGTTGCTTATCAC-AATGGGGAAGTCCCAGAAACAAAAGTTTA-TCTTAATGCAATTTTTCAAATTA----AAATGTTTGTATTTAA--TGACACACATA--TTTGAGGACAATCGCCAACATTTTTTATAATTTACATT---TAGTAATTTATGTA------ATTTCAAGG-CAGCTTCCCTGGTACAGTGGTTTCCAGAATTACTTCTCACTTTCATCATGAACTTCTTAAAAACTCAGTGagaggagcagccttgca-----------caaagaaaggcaccagtgtgaaagtcagtgacc--------aaaatgttttttcagg---ttctgaagctactaagcatacatcattactcaaattctttaaattctccaagtctcttgcttctgcaactataaggttaagtaacaataTTAATTATTAGTGATGTTATTACTGTTATTCTGAAAATCACAGTtagtacctaatatttactgggtgttt-gccatatctcatattgtgagctgag-acttttccccataggatctcatgtcactaccatgtgggctttatatatagtcagaatgatttcctcattt-tactgatgacaatattaaggtacaggggggtttcaaaatttacataagctctcacagatagcaaaggtcagaaccagaa i calJac3.chr21 C 0 C 0 s mm10.chr16 78089133 975 + 98207768 actgatgtcagacaaggtcatcctcACTTCCATGGGTGCATGTTGGGGCACAGAACTGAATCGTTTCTAGGTCTAATGTTCTACTCAGCACTCCAGCAGTTATGCCTGCCTCATAGTCTTCCCTTCTCTGCAATGGATACTAGTCCCATT-AATCTAATTAAAGTCCTTTATAAGATTTAATGGTCAGCCTTTCTAATGTTACCTTTGTAATGAAACTGAAGTAGGGTAGCATACGGTTGTTGTGATAACATCAAAAACGTCATCAGCGGTGCTCTCTACACTGAACAATAGTCC-TTCTGCTTG---------AGTGATACCAGTATTTTAC--------------TCCCGTTTATTCCAATTTGTCTAC-AGTGTTGAACCTGTAAACGGA-------AACACAGATGGAGAATGTCCAAGCAAGAGAACGTG--------GCAATTATTTGACCCAAGGCAAGTCTTTGGACTTAAAGTGGTCCGATTGC-CTTTAGACTGACCGGCCACTCTTCCCTT-ACCTATGCTTAGTAGTAATTGCTGTCGTTTCCGTTTCAAGGACATCTT--GTGGTGATGTGATGTCCAGCATCTCTCTTCAGTCTCCTTGGTATTTTCTTGAAAACTCAGCGAGATG---------------------------GGAACTAACTGGTGTGAAATTCAAGGGCTAAAAAAAAAAAATC-TTTTTCGAT---TTCTGAAGCCGC--AGCACATATCATTGTCAGGGTTC-CCAGGTTCCCTAGTGCCACTGTTTCTCTGACTGTAAGATGAAGCAGTGACAGTAATTAGTAATTATGTTATCAATGTTAATATGAAaataacagtaaacagctagcatttattgggtgctc-gccatatgttgcacagtaagttgggcacttttccctgtaagatctcatttaatcagcacagaggtttcacctagtaag--aatcactaccctgtttatcctcagg--gtcgctgagatacatagagctctaagaacattcccgagccttcatagctaacaatgtgcagggccCCAA i mm10.chr16 I 189 C 0 s canFam3.chr31 13779084 981 + 39895921 AGTGA--------------------GTCTCAACAGGTACAGCTGGGAGCGTGTAGGTGAATGGTTTA-AGGGCTGATGTTTTATTCAGCATGGAAGCAGTTAAGCCAGCTCCACGA--TTCTCTATTTTACACTGGCTTCTAATGACATTGAATCAAATTATATTTCTTTATAAGATTTAATGTTTAGCTTTTCTAATTTTACTTTTATAACGAAATTGAAGTAGGGCCGTGTGCAGTCATTTGGATAAAATTGAAAGTGCCAACAGCTACGTTCTTTAAACTAAATAGCAGCCTCTTTTGTTTAACTTTAGTAAGGGGTCCAATA-TCTTATGTGAAAATCTTCTACCTCTTTTGTTGGAATTTGACCAAAAGCTTTGAAACTGCAAGTGAAAATGCTTATTATAAGTGGAGAATTCCCAGAAAGAAAAGTTTAATTATAATGCAATTATTTGAATTA--------GTGTGTGTTTGA--TTACATATATACATTTGGGGACAATTACCAATCCCTTTGAT-ATCTACATT---TAGTCATTCATGTCTTTTCAGTTTAGAGG-CAGTTTCACCAGGGTGGTGGTTTTCCGAATCACTCTTCACCTTCTCCACAAACATCTTGAAAACTTGGTGTGAGGGGCAGCCTcagagaagagcttttcagggaaaagcacta-catgggagtcattgacc--------aaaatc-tctttcagattcttctgactctgctaagcgtacatctttgtgcaagtcccgtaagctctccaggcctcttgtttcttcaaccataagattaactaacaacagtaattattagttatgttattatggtgattatgaaaataacagt----agctaacatttattaggtgcttaggcacagagcatgttg---------------------taagatctcatttagttgccgcaaggactctacatccagtaagaactgtttccccgttt-taccagtgaggacactcaggtacagagagggttagaaatttgcccaagttcacatagct---aaacagcaggaccaTAA i canFam3.chr31 C 0 C 0 a score=551523.000000 s hg38.chr21_KI270874v1_alt 13389 188 + 166743 aactaaataaggtctgAATTAAGAATAAAAGACATTGAAAGACGCTTTAAGTCCTAAAATTCAGAGTAAAATAGGAGTCACTGA------------------------------------------------------CTGAATTTTAACTTTACGTAAA----------------------------------ATATGAAAATTATACTTATGAAACATCCATATTT---------CTAAAAATAATTTCCTGTTGGAACATCTTTATAATTATATACAACATA s panTro4.chr21 3626106 214 + 32799110 aactaaataaggtctgAATTAAGAATAAAAGACATTGAAAGACGCTTTAAGTCCTAAAATTCAGAGTAAAATAGGAGTCACTGA------------------------------------------------------CTGAATTTTAACTTTACGTAAACACAAGGCTTCTTTTTAAAAAGTATC--------ATATGAAAATTATACTCATGAAACATCCATATTT---------CTAAAAATAATTTCCTGTTGGAACATCTTTATAATGATATACAACATA i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4391773 214 + 32716333 aattaaataaggtctgAATTAAGAATAAAAGACATTGAAAGACCCTTTAAGTTCTAAAATTCAGAGTAAAATAGGAGTCACTGA------------------------------------------------------CTGATTTTTAACTTTACATAAACACAAGACTTCTTTTTAAAAAGTATC--------ATATGAAAATTATACTTATGAAACATCCATATTT---------CTAAAAATAATTTCCTGTTGGAatatctttataattatatctaacata i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168506910 214 - 198365852 agttaaataaggtctgAATTAAGAATAAAAGACATTAAAAGACCCTTTAAGTTCCAAATTTCACAGTAAAATAGGAGTCACTGA------------------------------------------------------CTGAATTTTAACTTTACATAAACACAAGACTTCCTTTCAAAAAGTATC--------ATATGAAAATTATACTTATGAAACATCCATATTT---------CTAAAACTAATTTCCTGTTGGAATATCTTTATAATTATATCGAACATA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162169786 214 - 192294377 agttaaataaggtctgAATTAAGAATAAAAGACATTAAAAGACCCTTTAAGTTCCAAATTTCACAGTAAAATAGGAGTCACTGA------------------------------------------------------CTGAATTTTAACTTTACATAAACACAAGACTTCTTTTCAAAAAGTATC--------ATATGAAAATTATACTTATGAAACATCCATATTT---------CTAAAACTAATTTCCTGTTGGAATATCTTTATAATTATATCGAACGTA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150854229 214 - 180432695 AGTTAAATAAGGTCTGAATTAagaataaaagacattaaaagacCCTTTAAGTTCCAAATTTCACAGTAAAATAGGAGTCACTGA------------------------------------------------------CTGAATTTTAACTTTACATAAACACAAGACTTCTTTTCAAAAAGTATC--------ACATGAAAATTATACTTATGAAACATCCATATTT---------CTAAAACTAATTTCCTGTTGGAATATCTTTATAATTATATCGAACata i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14955246 211 - 90373283 aattaaataaggtctgAATTAAGAATAAAAGACATTGAAAGACCCTTTAAGTTCCAAATTTCAGAGTAAAATAGGAGTCACTGA------------------------------------------------------CTGAATTTTAACCTTACATAAATACAAGGCTTCTTTTTAAAAAGTAT-----------ATGAAAATTATATTTATGAAACATCCATATTT---------CTAAAACTAATTTCCTGTTGGAATATCTTTATAATTATATCAAACATA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21882009 212 + 50472720 aataaaataaggtctGAACTAAGAATAAAAGACATTGAAAGACCCTTTCAGTTCTAAAATTCAGAGTAAAATAGGAATCACTGA------------------------------------------------------CTGAATTATAACTTTATATAAACAT--GCCTCCTTTTTAAAAAGTATC--------ATATGAAAGTTATAGTTATGAAACATATATATTT---------CTAAAAATAATTTCCTGTTGGGATATTTTTATAATTATGTCTAATATA i calJac3.chr21 C 0 C 0 s mm10.chr16 78090108 220 + 98207768 AAGTAACAAAAGTCCAAATTAGGAATAAAGGGTACTGAAATACCCTCTCAGTTATAAAATTGAGGTTAAAATGGGAATCCTGCA------------------------------------------------------CTCAAATATAAGTGTA--TGGGGGTAAGGCTCGCTTTAAGTAAAAACCTTTCCTCGGTGTGGAAGCT------AAGAAACAAACATATCTCT---GTTGCTAAAAATCATTTCTCACTGGAATTTCCTTAGAACTGTGTGTTACACA i mm10.chr16 C 0 I 374 s canFam3.chr31 13780065 270 + 39895921 ----AATTAGGGTCTAAATTAGCAACAGAAGATGCTCAAAGACCCCTTCAGTTCTAAAATTAAAGTTAAAATAGGAATCATTTAAAAAAAAGAAGAAAACCAGTTAACCGGAAAAAAAAAAAAAAAAGGAATCATTTGCCAAATTATAGCTCTGCATAAA-GTAAGACTGGCTTT--AAAAGTATT--------ATAGGAAAATTTTACCTATGAAACAAACACATTACCCAAAGGGCTAAAAATTGTTCCCTGTTAGTATAACTTTATAATGCTATGTAACATA i canFam3.chr31 C 0 C 0 e ponAbe2.chr21 16880219 769 + 48394510 I a score=81670.000000 s hg38.chr21_KI270874v1_alt 13577 35 + 166743 GTTTAATTTATAAACTTATTTTAGATGTACAGCTA s panTro4.chr21 3626320 35 + 32799110 GTTTAATTTATAAACTTATTTTAGATGTACAGCTA i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4391987 35 + 32716333 gtttaatttataaacttatTTTAGATGCACAGCTA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168507124 35 - 198365852 GTTTAATTTATAAAGTTATTTTAGATGCACAGCTA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162170000 35 - 192294377 GTTTAATTTATAAAGTTATTTTAGATGCACAGCTA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150854443 35 - 180432695 gtttaatttataaagttattttagaTGCACAGCTA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14955457 35 - 90373283 GTTTAATTTATAAAGTTATTTTAGATGCGCAGCTA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21882221 34 + 50472720 GTTTGATTTGTAAACTT-TTTTAGATGCACAGGTA i calJac3.chr21 C 0 C 0 s canFam3.chr31 13780335 26 + 39895921 --ATTACTTACAAACTTTTTTAA-------AGCTA i canFam3.chr31 C 0 C 0 e mm10.chr16 78090328 374 + 98207768 I e ponAbe2.chr21 16880219 769 + 48394510 I a score=1682186.000000 s hg38.chr21_KI270874v1_alt 13612 581 + 166743 CCATTTGAAAGGAGAACGACCTC-TAATTTTTATATGAAATACCATGCAGTATAATATTACT-TCTTGTTAATTTTCAATTAACAATT-TTCCTTTTTTAAATCATGTCTCCA----ATTATTGTCTGTGCCCTTTTTCGGCTGTGCAACTGAAATCTTTGACTGAAGTGTAATTTCATTATTTGTAAAGGCAGAAACAATG-GAACTGTCTGTG----CTCATATTAATTTTAGTAGAGCGTGCACTCTAAAATATTTAGCCAGAGCAACAAAGTTTATGTCAATCCTAGTTATTATCAGCCTAGAAATCTCTTGGAACTAGAATCCATTGTAAAGTCAAATTAAAGGTTTCTGTCTCTTGGTAAAGCAGGActctctcacttattacatttcaaagaacaataaactgcttatataattttcttcacaccatgttggaacttatccttatgcctttgctcacactgag-ttgggcttaaaatattt-cctcctcctttgtaaagtcttagatatcctttcatttattctttaagactcatctttgtgtca---ccttctaagacatcttctttattgccctaCTAAAAACCACATA s panTro4.chr21 3626355 581 + 32799110 CCATTTGAAAGGAGAATGACCTC-TAATTTTTATATGAAATACCATGCAGTATAATATTACT-TCTTGTTAATTTTCAATTAACAATT-TTCCTTTTTTAAATCATGTCTCCA----ATTACTGTCTGTGCCCTTTTTTGGCTGTGCAACTAAAATCTTTGACTGAAGTGTAATTTCATTATTTGTAAAGGCAGAAACAATG-GAACTGTCTGTG----CTCATATTAATTTTAGTAGAGCGTGCACTCTAAAATGTTTAGCCAGAGCAACAAAGTTTATGTCAATCCTAGTTATTATCAGCCTAGAAATCTCTTGGAACTAGAATCCATTGTAAAGTCAAATTAAAGGTTTCTGTCTCTTGGTAAAGCAGGACTCTCTCACTTATTACATTTCAAAGAACAATAAACTGCTTATATAATTTTCTTCACCCCATGTTGGAACTTATCCTTATGCCTTTGCTCACACTGAG-TTGGGCGTAAAATATTT-CCTCCTCCTTTGTAAAGTCTTAGATATCCTTTCATTTATTCTTTAAGACTCATCTTTGTGTCA---CCTTCTAAGACATCTTCTTTATTGCCCTACTAAAAACCACACA i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4392022 579 + 32716333 CCATTTGAAAGGAGAACGACCTC-TAATTTTTATATAAAATACCATGCAATGTAATATTACT-TCTTGTTAATTTTCAATTAACAATT-TTCCTTTTTTAAATCATGTCTCCA----ATTACTGTCTGTGCCCTTTCTCGGCTGTGCAACTGAAATTTTTGACTGAAGTATAATTTCATTATTTGTAAAGGCAGAAACAATG-GAACTGTCTGTG----CTCATATTAATTTTAGTAGAGCATGCACTCTAAAATGTTTAGCCAGAGCAACAAAGTTTATGTCAATCCTAGTTATTGTCAGCCTAGAAATCTCTTGGAATTAGAATCCATTGTAAAGCCAAATTAAAGGTTTCTGTCTCTTGGTAAAGCAGGACTCTCTCACTTATTACATTTCAAAGAACAATAAACTGTTTATATGGTTTTCTTCACACCA--TTAGAATTTATCCTTATGCCTTTGCTCACACTGAG-TTGGGCTTAAAATATTT-CCTCCTCCTTTGTAAAGTCTTAGATATCCTTTCATTTGTTCTCTAAGACTCATCTTTGTGTCA---CCTTCTAAAACATCTTCTTTATTGCCCTACTAAAAACCACACA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168507159 580 - 198365852 CCATTTGAAAGGAGAATGACCTG-TAATTTTTATATAAAATACCATGCAGTGTAATATTAC--TCTCGTTAATTTTCAATTAACAATT-TGCCTTTTTTAAATCATGTCTCCA----ATTACTGTGTGTGCCCTTTTTCAGCTGTGCAACTGCAATCTTTGACTGAAGTGTAATTTCATTATTTGTAAAGGCAGAAACAATG-GAACTGTCTGTG----CTCATATTAATTTTAGTAGAGCATGCACTCTAAAATGTTTAGCCAGAGCAACAAAGTTTATGTCAATCCTGGTTATTATCAGCCTAGAAATCTCTTGGACTTAGAATCCATTGCAAAGCCAAATTAAAGGTTTGTGTCTCTTGGTAAAGCAGGACTCTCTCACTTATTACATTTCAGAGAAAAATATACTGCTTATCTAGTTTTCTTCACAACATGTTGGAACTTATCCTTATGCCTTTGCTCACACTGAG-TTGGGCTTAAAATATTT-CCTCCTCCTTTGCAAAGTTTTAGATATCCTTTTATTTATTCTTTAAGACTAATGTTTGTGTCA---CCTTCTAAAACATCTTCTTTATTGCCCTACTAAAATCCACACA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162170035 580 - 192294377 CCATTTGAAAGGAGAATGACCTG-TAATTTTTATATAAAATACCATGCAGTGTAATATTAC--TCTCGTTAATTTTCAATTAACAATT-TGCCTTTTTTAAATCATGTCTCCA----ATTACTGTGTGTGCCCTTTTTCAGCTGTGCAACTGCAATCTTTGACTGAAGTGTAATTTCATTATTTGTAAAGGCAGAAACAATG-GAACTGTCTGTG----CTCATATTAATTTTAGTAGAGCATGCACTCTAAAATGTTTAGCCAGAGCAACAAAGTTTATGTCAATCCTGGTTATTATCAGCCTAGAAATCTCTTGGACTTAGAATCCATTGCAAAGCCAAATTAAAGGTTTGTGTCTCTTGGTAAAGCAGGACTCTCTCACTTATTACATTTCAGAGAAAAATATACTGCTTATCTAGTTTTCTTCACAACATGTTGGAACTTATCCTTATGCCTTTGCTCACACTGAG-TTGGGCTTAAAATATTT-CCTCCTCCTTTGCAAAGTTTTAGATATCCTTTTATTTATTCTTTAAGACTAATGTTTGTGTCA---CCTTCTAAAACATCTTCTTTATTGCCCTACTAAAATCCACACA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150854478 580 - 180432695 CCATTTGAAAGGAGAATGAcctg-taatttttatataaaataccatGCAGTGTAATATTAC--TCTCGTTAATTTTCAATTAACAATT-TGCCTTTTTTAAATCATGTCTCCA----ATTACTGTGTGTGCCCTTTTTCAGCTGTGCAACTGCAATCTTTGACTGAAGtgtaatttcattatttgtaaaGGCAGAAACAATG-GAACTGTCTGTG----CTCATATTAATTTTAGTAGAGCATGCACTCTAAAATGTTTAGCCAGAGCAACAAAGTTTATGTCAATCCTGGTTATTATCAGCCTAGAAATCTCTAGGACTTAGAATCCATTGCAAAGCCAAATTAAAGGTTTGTGTCTCTTGGTAAAGCAGGACTCTCTCACTTAttacatttcagagaaaaataaactgctTATATAGTTTTCTTCACAACATGTTGGAACTTATCCTTATGCCTCTGCTCACACTGAG-ttgggcttaaaatattt-cctCCTCCTTTGTAAAGTTTTAGatatccttttatttattctttaagacTAATGTTTGTGTCA---CCTTCTAAAACTTCTTCTTTATTGCCCTACTAAAATCCACACA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14955492 577 - 90373283 CCATTTGAAAGGAGAATGACCTG-TAATTCTTATATAAAATATCATGCAGTGTAATATTAC--TCTCGTTAATTTTCAATTAACAATT-TGCCTTTTTTAAATCATGTCTCCA----ATTACTGTGTGTGCCCTTTTTCAGCTGTGCAACTGCAATCTTTGACTGAAGTGTAATTTCATTATTTGTAAAGGCAGAAACAATG-GAACTGTCTGTG----CTCATATTAATTTTAGTAGAGCATGCACTCTAAAATGTTTAGCCAGAGCAACAAAGTTTATGTCAATCCTGGTTATTATCAGCCTAGAAATCTCTTGGACTTAGAATCCATTGCAAAGCCAAATTAAAGGTTTGTGTCTCTTGGTAAAGCAGGACTCTCTCACTTATTACATTTCAGAGAACAATAAACTGCTTATATAGTTTTCTTCACACCATGTTTGAACTTACTCTTATGCCTTTGCTCACACTGAG-TTGGGCTTAAAATATTT-CCTCCTCCTTTGTAAAGTTTTAGATATCCTTTTATTTATTCTTTAAGACTAATGTTTGTGTCA---CCTTCTAAAACA---TCTTTATTGCCCTACTAAAATCCACACA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21882255 572 + 50472720 CCATTTCAAAAGAGAACAACCTG-CAATTTTTATATAAAATAACATGCAGTGGAATATTATTACTTCGTTAATTTTCATTTAAC-ATT-TTCCTTTTTTAAATCATGTCTACA----ATTACTGTCTGTGCCCTTTTCTGATTGCACAACTGAAATCT----CTGAAGTGTAATTTCATTATTTGTAAAGGCAGAAACAATG-GAGTTGTCTATG----CTCATTTTAATTTTAGTAGGACATGTGTTCTAAAATGTTTAGTGGGAGCAAGAAAATTTATGCCATTCCTAGTTATTATCAGCCTAGAAATCTCTTGGACTTAGAATCCATTGCAAATCCAAATTAAAGGTTTGTGTCTCTTGGTAAAGCAGGACTCTCTCACTTATTTCATTTCCAAGAACAATAAACTGCTTCTTTAGTTTTCTTCCTACCATGTTAAAACTTATCCTTATGCCTTTGCTCACACTGAG-TTGGGCTTAAAATATTT-CCTCCTCCTTTGT--AGTCATACATATCCTTTCATTTATCCTTTAAGATTCATCTTTGTGTCA---CCTTCTAAAACA---TCTTTTTTGCCCTACTCAAAACCACACA i calJac3.chr21 C 0 C 0 s mm10.chr16 78090702 545 + 98207768 CTATTTGAAAGGAAGATCGCCTG-GAATTTTTACACAAAATACTGTGCAGTACAATATTACT-TTATCTTGACATTCAATTAACCGTTATTATTTTTTTAAATCATGATCAAACGTGATGGCTCTTCGTG-CCTTTTTCAGCTGCGCAACTGAAATCTTCGATGGAGCAGTCATGCCATCA-TTGTAAAGGCAGCAACAATGAAAACTGCTTGTGACGTTTCATCTCAACTTCATTAAGGCATACATGCTAAACAG-CCACCCTGAGCAAAGACAGCCGTGCCAGCTCTGGATATTACCCACTTAGAAG--TCTAGGAGTTGGAACACATGGCAAAACTCAGCCCAAGATTTCCATTTCTTAGTTAAGCAGAACTGGCCCATTCATTCCATACCCAGGAACAATGAACTACTCACA----CTTCTTTGTATCATGTTGGAGCT----------------------------TTTAGATTATAATATTTATCCCCTCCTTGGTATACTCTTACACATCCTTTA-----------AAGACTCAGTTTTGTGTCT---GCTCCTAGAACCATTTCCGCTTTGTTCTACTAAACCTCATGTA i mm10.chr16 I 374 I 172 s canFam3.chr31 13780361 532 + 39895921 CCATTTGAAAAGAAGACTACCCCATAATTTTTATATAAAATACCA---GAAGTAATGTCAC----TTGTTAATATTCAATTGGCCATT-TTCCTCTTTTAAGTCATACCTACC----ATTAACATCTGTG-CCTCTTTTGACTGTGCATTTGAAATATTTGACTAAAATGTAATTTCATTTTTTATAAAGGCAGAAACAATG-AAA----CCATA----CTCATATTAATTTTAGTAGAGCATGTACTATAAAATGTTTAGTCAGAGTAACATAGTTCATGTCAATCCTAGTAATTAGCAGCTTATAAATCTCT------TAGAATCCATTGCAAAGCCAATTTAAGGGTTTGAGTCTCTTCGTAA-------------CAGTT---------------ACAATGAACTGCTTTTATAGTTTTCTTCTCACCATGTTGGAGCTTACCC-CATCCCTTCGCTAGCACTGAATTTTGGCCTGCAATATTT-TCTTCTCCTTGGTGAACTCATATATCCCCCCT-------TCTTTAAGACTCAGCATTGTGTCACCTCCTTCTAGAACATCATCTTCA-TGCCCCATGAACACCCACACA i canFam3.chr31 C 0 C 0 e ponAbe2.chr21 16880219 769 + 48394510 I a score=804192.000000 s hg38.chr21_KI270874v1_alt 14193 346 + 166743 TACCTACTCCCAGGCAAAA--------TGATGCCCCTTTATAAAGATCTTTATTGCTGCACATATGGTATTACGGTACAATTAACAGTTTATATGTCATTCTTCCTTACAAGACAGAATA----TTGTTTCAGGAAGGttttttg-ttttttaagtgacagcctctctatgcacctaggctggactgcagtggttactcatgggg--acaattatgggacattatattcttcacatcctgagcaaactgatgctcctgccttggcctctggagtagctagaactgcagacatggatcaccatgactggTTTCAGGTAGCTTTTGAGTGTAGAAGAATAACCCAATAGTTGCCTGATCTAGG s panTro4.chr21 3626936 346 + 32799110 TACCTACTCCCAGGCAAAA--------TGATGCCCCTTTATAAAGATCTTTATTGCTGCACATATGGTATTACGGTACAATTAACAGTTTATATGTCATTCTTCCTTACAAGACAGAATA----TTGTTTCAGGAAGGttttttg-ttttttaagtgacagcctctctatgcacctaggctggactgcagtggttactcatgggg--acaattatgggacattatattcttcacatcctgagcaaactgatgctcctgccttggcctctggagtagctagaactgcagacatggatcaccatgactggTTTCAGGTAGCTTTTGAGTGTAGAAGAATAACCCAGTAGTTGCCTGATCTAGG i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4392601 346 + 32716333 TACCTACTCCCAGGCAAAG--------TGATGCCCCTTTATAAAGATCTTTATTGCTGCACATATGGCATTATGGTACAATTAATAGTTTATATGTCATTCTTCCTTACAAGACAGAATA----TTGTTTCAGGAAGGtttttca-ttttttaagtgacagcctctctatgcacctaggctggactgcagtggttactcataggg--acaattatgggacattatactcttgaaatcctgagcaaagtgatgctcctgccttggcctctggagtagctggaactacagacatggatcatcatgactggctTCAGGTAGCTTTTGAGTGTAGAAGAATAACCCAGTAGTTGCCTGATCTAGG i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168507739 347 - 198365852 TACCTAGTCCCAGGCAAAA--------TGATGTTCCTTTATAAAGATCTTTATTGCTGCACATATGGCATTATGGTACAATTAATAGTTTATATGTCATTCTTCCTTACAAGACAGAATA----TTGCTTCAGGAAGGTTTTGCGtttttttaagtgacagcctctctatgcacctaggctggactgcagtggttactcatgggc--acaattatgggacattatattcttgaaatcctgagcaaagtgatcctcctaccttggcctctggagtagctggaactacagcgatgcatcaccatgATTAGCTTCAGGCAGCTTTTGAGTGTAGAAGAATAACCCAGTAGTTGCCTGATCTAGG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162170615 347 - 192294377 TACCTAGTCCCAGGCAAAA--------TGATGTTCCTTTATAAAGATCTTGATTGCTGCACATATGGCATTATGGTACAATTAATAGTTTATATGTCATTCTTCCTTACAAGACAGAATA----TTGCTTCAGGAAGGtttttcgtttttttaagtgacagcctctctatgcacctaggctggactgcagtggttactcatgggc--acaattatgggacattatattcttgaaatcctgagcaaagtgatcctcctaccttggcctctggagtagctggaactacagcgatgcatcaccatgATTAGCTTCAGGCAGCTTTTGAGTGTAGAAGAATAACCCAGTAGTTGCCTGATCTAGG i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150855058 347 - 180432695 TACCTAGTCCCAGGCAAAA--------TGATGTTCCTTTATAAAGATCTTTATTGCTACACATATGGCATTATGGTACAATTAATAGTTTATATGTCATTCTTCCTTACAAGACAGAATA----TTGCTTCAGGAAGGtttttcgtttttttAAGTGACAGCCTCTCTATgcacctaggctggactgcagtggttaCTCATGGGC--ACAATTATGGGACATTATATTCTTGAAATCCTGAgcaaagtgatcctcctaccttggcctctggagtagctggaactacagcgaTGCATCACCATGATTAGCTTCAGGCAGCTTTTGAGTGTAGAAGAATAACCCAGTAGTTGCCTGATCTAGG i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14956069 347 - 90373283 TACCTAGTCCCAGGCAAAA--------TGATGTTCCTTTATAAAGATCTTTATTGCTGCATGAATGGCATTATGGTACAATTAATAGTTTATATGTCATTCTTCCTTACAAGACAGAATA----TTGCTTCAGGAAGGtttttcgtttttttaagtgacagcctctctatgcacctaggctggactgcagtggttactcatgggc--acaattatgggacattatattcttgaaatcctgagcaaagtgatcctgctaccttggcctctggagtagctggaactacagcgatgcatcaccatgATTAGCTTCAGGCAGCTTTTGAGTGTAGAAGAATAACCCAGTAGTTGCCTGATCTAGG i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21882827 341 + 50472720 TACATACTCCCAGGCAAAA--------TGATGCCCCTTTATAAAGGTCTTAATGG-TACACATATGGCATTACAGTACAATTAATTGTTTATATGTCATTCTTCTTTAAAAGACAGAATA----TTGTTTCTGGAAGCttt-----ttttttaagtgacagcctctctatgcacctaggctggactgcagtggttactcatgggt--acaattatgggacattatatttttgaaatgctaggcaaaggaatcctcctgcctcggcctctggagtaggtggaactacagacatgcatcaccatgactggTTTCAAGCAGCTTTTGAGTGTAGAAGAACAACCCAGTAGCTACCTGATCTAGG i calJac3.chr21 C 0 C 0 s canFam3.chr31 13780893 226 + 39895921 ------TTCCCAGAAAAAAAATGGAATCAGTGCCCTTCTAC-AAGATCTCTTATG-TACATGTACTGCATTGTAGTATAATTCTCTGTT--TATGTCTTTCTTCCCTACAAGATGACATGTTATTtgtttcaggcagcttttg---tatataaaaaaacaaccac---------------------------aacactcaaaggcatacaacaata----atcacgtttctcaca---------------------------gatctgtgggtctgctgg----------------------------------------------------------------tagtcaactgATGGAAA i canFam3.chr31 C 0 C 0 e mm10.chr16 78091247 172 + 98207768 I e ponAbe2.chr21 16880219 769 + 48394510 I a score=191842.000000 s hg38.chr21_KI270874v1_alt 14539 72 + 166743 -CTGCCTTTTTGGCCTATTCTTCATCAAGCTGTGGGTCAGAGTGGGCATGAGTCCTTGCTTAGATCTCTATGT s panTro4.chr21 3627282 72 + 32799110 -CTGCCTTTTTGGCCTATTCTTCATCAAGCTGTGGGTCAGAGTGGGCATGAGTCCTTGCTTAGATCTGTATGC i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4392947 72 + 32716333 -CTGCCTTTTTGGCCTATTCTTCATCAAGCTGTGGGTCAGACTGGACATGAGTCCTTGCTTAGATCTGTATGT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168508086 72 - 198365852 -CTGCCTTTTTGGCCTGTTCTGCATCACGCTGTGGGTCAGACCGGATATGAGTCCTTGCTTAGATCTGTCTGT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162170962 72 - 192294377 -CTGCCTTTTTGGCCTGTTCTGCATCACGCTGTGGGTCAGACCGGATATGAGTCCTTGCTTAGATCTGTCTGT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150855405 72 - 180432695 -CTGCCTTTTTGGCCTGTTCTGCATCACGCTGTGGGTCAGACTGGATATGAGTCCTTGCTTAGATCTGTCTGT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14956416 72 - 90373283 -CTGCCTTTTTGGCCTGTTCTGCATCACGCTGTGGGTCAGACTGGACATGAGTCCTTGCTTAGATCTGTCTGT i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21883168 71 + 50472720 -CTGGCTTTTTGGTCAGTTCTTCATCAAGCTGTGTGTCAGACTGGACACGAGTCCTTGCTTAGATCT-TACGT i calJac3.chr21 C 0 C 0 s mm10.chr16 78091419 72 + 98207768 -CTGCTTTTAGGGCCAGTTGTGCATCCTGCTATGGGTTGGGCTCTTCTCATCTCCTTGCTAAGAGCTGCATGT i mm10.chr16 I 172 I 552 s canFam3.chr31 13781119 71 + 39895921 CTGGCTTTCCTAGCTAGTTCTGCCTCAAGCCCTGGATTCAGCTGGGCTTTAATCCTTGCTTTGGTATATGC-- i canFam3.chr31 C 0 C 0 e ponAbe2.chr21 16880219 769 + 48394510 I a score=2165190.000000 s hg38.chr21_KI270874v1_alt 14611 861 + 166743 GTATTACTTCTGGGGCACAG-TTCTACTTATGGTGACGGAGGAACAATCAATAAATCAACCTGCACTGCACAAGCACATTTTGTACAACTGCTTTCATCACATCTGCTAACATTGTTTTGGC-AAAGCAAATCATATGAACAAACACAACATCAGGGTG-------------------------CAGCCCCAGAGGAGGCTGTGAGTGCATATTATCATGACAAGGAAGTGAAGAGTTGTGACCAATAGGTCAAATACTATagaataacaaccagttctcatttatctttatgtgtatatccagtgcctgggactatacttga-ccattgtgagtcctcaagacatgtatgaagaatgaatg-CTCTGACACTGCTGATAGTGTTCCCACACTCATTCGTTCTGTGAGGCATACTCCAAACCACATCAAACTACCAAAGATTTGAAACACAGGATGTTGAACTCCCCAATTATATTTAT-------CGAGACATTCAACAGCTTCCAAACAGAAATACAAAGATAGAGATTTTCATACAGTAAACTGTTAGGTTATAATTTGGGCAGAAGAACATAAAGTTGTAGCCTTAGACATGGAATTTATTCATTTCCGTTtgtggtatattgttttccaaaatgcctacaacgatacctcctttcccatgtgtgcctttgcaataggaccatgccacccatcccagcaaggggtacagtctgtttctaccttccttcaatctaggatatccttgcgacttgcttgaccagtagaatgtggtggaagtgaccctatgcagttatgggtc--tacgtcttaa---gaggtcttgcaatatttttctaagaggtctt-gcaatatttttcttagtttctgcagaattttatcttttacataaagaaacaca s panTro4.chr21 3627354 862 + 32799110 GTATTACTTCTGGGGCACAG-TTCTACTTATGGTGATGGAGGAACAATCAATAAATCAACCTGCACTGCACAAGCACATTTTGTACAACTGCTTTCATCACATCTGCTAACATTGTTTTGGCAAAAGCAAATCATATGAACAAACACAACATCAGGGTG-------------------------CAGCCCCAGAGGAGGCTGTGAGTGCATATTATCATGACAAGGAAGTGAAGAGTTATGACCAATAGGTCAAATACTATAGAATAACAACCAGTTCTCATTTATCTTTAtgcgtatatccagtgcctgggactatacttga-ccattgtgagtcctcaagacatgtaagaagaatgaatg-CTCTGACACTGCTGATAGTGTTCCCACACTCATTCGTTCTGTGAGGCATACTCCAAACCACATCAAACTACCAAAGATTTGAAACACAGGATGTTGAACTCCCCAATTATATTTAT-------CGAGACATTCAACAGCTTCCAAACAGAAATACAAAGATAGAGATTTTCATACAGTAAACTGTTAGGTTATAATTTGGGCAGAAGAACATAAAGTTGTAGACTTAGACATGGAATTTATTCATTTCCGTTtgtggtatattgttttccaaaatggctacaacgatacctcctttcccatgtgtgcctttgcaataggaccatgccacccatcccagcaaggggtacagtctgtttctaccttccttcaatctaggaaatccttgtgacttgcttgaccagtagaatgtggtggaagtgaccctatgcagttatgggtc--tacgtcttaa---gaggtcttgcaatatttttctaagaggtctt-gcaatatttttcttagtttctgcagaattttatcttttacataaagaaacaca i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4393019 823 + 32716333 GTATTACTTCTGGGGCCCAGTTTCTACTTATGGTGATGGAGGAACAATCAATAACTCAACCTGCACTGCACAAGCACATTTTGTACAACTGCTTTCATCATATCTGCTAACATTGTTTTGGCAAAAGCAAATCATATGAACAAACCCAACATTGGGG-G-------------------------CAGCCCCAGAGGAGGCTGTGAATGCATATTATCATGACAAGGAAGGGAAGAGTTGTGACCAATAGGTCAAATACTATAGAATAAC-ACCACTTCTCATTTATCTTTATTtgtgtatccagtgcctgggactatacttga-ctattgtgagtcctcaagatatgtatgaagaatgaatg-CTCTGATACTGCTGATAGTGTTCCCACACTCATTCGTTTTGTGAGGCATACTCCAAACCACATCAAACTACCAAAGATTTGAAACACAGGATGTTGAACTCTTCAATTATATTTAT-------CGAGACATTCAACAGCTTCCAAACAGAAACACAAAGATAGAGATTTTCATACAGTAAACTGTTAGGTTATAATTTGGGCAGAAGAACATAAAGTTGTAGCCTTAGACATGGAATTTATTCATTTCTGTTtgtagtatattgttttccaaaatggctacaacaatacctcctttc---------------caataggaccatgccacccatcccagcaaagggtacagtctatttctaccttccttcaatctaggatatccttgcgacttgcttgaccagtagaatgtggtggaagtgaccctatgcagatatgggtc--tacgtct--------------------------taacaggtctt-gcaatatttttcttagtttctgcagaatgttatcttttacataaagaaacatg i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168508158 840 - 198365852 GTATTACTTCTGGGGCCCAGCTTCTACTTATGGTGATgggggaacaatcaataaatcaacctgcactacacaagcacatcttgtgcaactgctttcatcacatctgctaacattgttttggcaaaagcaaatcatatgagcaaacccgacatcaggggg-------------------------cagcccaagatgaggccgtgaatgcATATTATCACGACAAGGAAGTGAACAGTTGTAAccaataggtcaaatactagagaataacaaccacttctcatttatctttatttgtatatccagtgcctgggactatacttga-ccattgtgagtcctcaagacatgtttgaagaatgaatg-CTCTGATACTGCTGATAGGGTTCCCACACTCATTCGTGTTGTGAGGCATACTCCAAACCACATCAAACTACCAAAGATTTGAAACACAGGATGTTGAACTCTTCATTTCTATTTAT-------TGAGACACTCAACAGCTTCCAAACAGAAATACAAAGATAGAGATTTTCATACAGTAAACTGTTAGGTTATAATTTGGGCAGAAGAACATAAAGTTGTAGCCTTAGACATGGAATTTATTCATTTCCATTTGGGGCCTattgttttccaaaatggctacaacaatacctcctttcccacacgcccctttgcaataggaccatgccacccatcccagcaagggatacagtctatttctacatttctccaatctaggatatccttgcaacttgcttgaccagtagcatatggtggaagtgaccctatgcagttatgggtc--tacaata--------------------------taagaggtctt-gcaatatttttcttagtttctgcagaattttatcttttacataaagaaacatg i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162171034 840 - 192294377 GTATTACTTCTGGGGCCCAGCTTCTACTTATGGTGATGGGGGAACAATCAATAAATCAACCTGCACTACACAAGCACATCTTGTGCAACTGCTTTCATCACATCTGCTAACATTGTTTTGGCAAAAGCAAATCATATGAGCAAACCCGACATCAGGGGG-------------------------CAGCCCAAGATGAGGCCGTGAATGCATATTATCACGACAAGGAAGTGAACAGTTGTAACCAATAGGTCAAATActagagaataacaaccacttctcatttatctttatttgtatatccagtgcctgggactatacttga-ccattgtgagtcctcaagacatgtttgaagaatgaatg-CTCTGATACTGCTGATAGGGTTCCCACACTCATTCGTGTTGTGAGGCATACTCCAAACCACATCAAACTACCAAAGATTTGAAACACAGGATGTCGAACTCTTCATTTCTATTTAT-------TGAGACACTCAACAGCTTCCAAACAGAAATACAAAGATAGAGATTTTCATACAGTAAACTGTTAGGTTATAATTTGGGCAGAAGAACATAAAGTTGTAGCCTTAGACATGGAATTTATTCATTTCCATTTGGGGCCTattgttttccaaaatggctacaacaatacctcctttcccacacgcccctttgcaataggaccatgccacccatcccagcaagggatacagtctatttctacatttctccaatctaggatatccttgcaacttgcttgaccagtagcatatggtggaagtgaccctatgcagttatgggtc--tacaata--------------------------taagaggtctt-gcaatatttttcttagtttctgcagaattttatcttttacataaagaaacatg i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150855477 839 - 180432695 GTATTACTTCTGGGGCCCAGTTTCTACTTATGGTGATGGGGGAACAATCAGTAAATCAACCTGCACTACACAAGCACATTTTGTGCAACTGCTTTCATCACATCTGCTAACATTGTTTTGGCAAAAGCAAATCATATGAGCAAACCCGACATC-GGGGG-------------------------CAGCCCAAGATGAGGCCGTGAATGCATATTATCACAACAAGGAAGTGAACAGTTGTGACCAATAGGTCAAATACTACAGAATAACAACCACttctcatttatctttatttGTATATCCAGTGCCTGGGACTATACTTGA-CCATTGTGAGTCCTCAAGACATGTTTGAAGACTGAATG-CTCTGATACTGCTGATAGGGTTCCCACACTCATTCGTGTTGTGAGGCATACTCCAAACCACATCAAACTACCAAAGATTTGAAACACAGGATGTTGAActcttcatttctatttat-------tgagACACTCAACAGCTTccaaacagaaatacaaagatagaGATTTTCATACAGTAAACTGTTAGGTTATAATTTGGGCAGAAGAACATAAAGTTGTAGCCTTAGACatggaatttattcatttccatttGGGGcctattgttttccaaaatggctacaACAATACCTCCTTTCCCACGTGCCCCTTTGCAATAGGACCATGCCACCCATCCCAGCAAGGGATACAGTCTCTTTCTACATTTCTTCAATCTAGGATATCCTTGCAACTTGCTTGACCAGTAGCATATGGTGGAAGTGACCCTATGCAGTTATGGGTC--TACAATT--------------------------TAAGAGGTCtt-gcaatatttttcttagtttctgcAGAATTTTATCTTTTACGTAAAGAAACATG i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14956488 840 - 90373283 GTATTACTTCTGGGGCCCAGTTTCTACTTATGGTGATGGGGGAACAATCAATAAATCAACCTGCACTACACAAGCACATCTTGTGCAACTGCTTTCATCACATCTGCTAACATTGTTTTGGCAAAAGCAAATCATATGAGCAAACCTGACATCAGGGGG-------------------------TAGCCCAAGATGAGGCCGTGAATGCATATTATCACGACAAGGAAGTGAACAGTTGTGACCAATAGGTCAAATActagagaataacaaccacttctcatttatctttatttgtatatccagtgcctgggactatacttga-ccattgtgagtcctcaagacatgtctgaagaatgaatg-CTCTGATACTGCTGATAGGGTTCCAACACTCATTCGTGTTGTGAGGCATACTCCAAACCACATCAAACTACCAAAGATTTGAAACACAGGATGTTGAACTCTTCAATTCTATTTAT-------TGAGACATTCAACAGCTTCCAAACAGAAATACAAAGATAGAGATTTTCATACAGTAAACTGTTAGGTTATAATTTGGGCAGAAGAACACAAAGTTGTAGCCTTAGACATGGAATTTATTCATTTCCATTtgtggcctattgttttccaaaatggctacaacaatacctcctttcccacatgcccctttgcaataggaccatgccacccatcccagcaagggatacagtctatttctacatttcttcaatctaggatatccttgcaacttgcttgaccagtagcatatggtggaagtgaccctatgcagttatgggtc--tacaatt--------------------------taagaggtctt-gcaatatttttcttagtttctgcagaattttatcttttacataaagaaacatg i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21883239 834 + 50472720 GTGTTGCTTCTGGGGCCCAGTTTCTACTGA-GGTGATGGAGGGACAATAAATAAATCAAGCTGCACTACACAAGCACATTTTGTGCAACTGCTCACATCACATCTTCTAACATCCCTTTGGCAAAAGCAAATCATATGAACAAACCCAGCATCAGGGGG-------------------------CAGCCTGAGACGAGG-TGTGAATGCATGTTATCATGACAAGGAGGTGAAGAGCTGTGATCAATAAGTCAAATGCTATagaataacaaccatttcccatttatctttatttgtctatccagtgcctggaac-aaacttaa-ccatagtgagtcctcaagacgtgtttgaagaatgaatg-CTCTGATACTGCTAATAGTGTTCCCACACTCATTTGTTTCATGAGGCATACTCCAAACAACATCAAATTACAAAACATTTGGAAGACAGGATGATGAACTCTTCAATTCTATTTAT-------TGAGACATTCTACAGCTTCCAAACAGAAATACAAAGATATAGATTTTCATATAGTAAACTGTTAGTTTATAATTTGGGCAGAAAAGCATAAAGTTGTAGCCTTAGACATGCAATTTATTCATTTCTGTTtgtggtatattgttttccaaaatggctacaataatacctgctttcccatgtgctcctttgcaatagaattgtggcacccattctagcaaggggtacagtctacttttac-ttccttcaatctaggatatccttgcaacttgcttgaccagtagaata---tggaagtgaccctatgcagttacacatc--tgtgtct--------------------------taagaggtcttAACAATATTTTTGTTAGTTTCTGCAGAATTTTATCTTTTACATAAAGAAACTCA i calJac3.chr21 C 0 I 163 s canFam3.chr31 13781190 831 + 39895921 ATATTACTTCTGAGGCCCAGTTTCTACTCATAGTGATGGAA----AAGGAATAAGTCAAGCCCCACTAGATAAGCACATTTTGTGCTACTAC-----------------------------CAAAAGAAAGCC--ATGGACAAACTCAAATTCAGAGGGTCAGGGAAATACATTCTACCCGTATCACCTCTAGACAAGGCTTTGAAAGCACAGAATCAATTCAAGGGAGTGACAAGTTGTGACTAATAAGTCAAATGCCATGGAATAAAAACCA-TCTTTACTCATCTTTACTTATACATAcaatgtctggaattgtacttaacccatagaaagtactcaaaatatacttggtgaatgaatgTCTCTGATACTGCTAACCATGTTCCTGCATTCATTCATTTTATAAAGCATACTCCAAATCACATGAAACTGACAAAGATTTGAAAGAGAGAATGATGAAGTATTCACTTA-ATTTACTGAGACATGAGACATTCAATAGATCCCAAACAG-------------TATGTATTCATACAGTGAACTGCCAGGTTATAATTTGGGCAAAGGAGTATATAGTAGTGGCCTTAAAAATGTAACTCATTCATTTGTGTTtgtagtatattgttttccaacatggccacaacaattgttcccttcctatgtgttccttagcaatgtgactataccactcctcctatcaaag-----agtgtatgtttac--tctttggatgtaggatatcttcatgatttgtttaaccagtaaaatatggcacaagtgagccagtgcacaagtgagccagtgcaattaagagtaaggcct-------------taaaaagtctt-gtaactttggcttttgttccttcagaat-tcatctttcatgtaaagaaactca i canFam3.chr31 C 0 C 0 e mm10.chr16 78091491 552 + 98207768 I e ponAbe2.chr21 16880219 769 + 48394510 I a score=405186.000000 s hg38.chr21_KI270874v1_alt 15472 153 + 166743 ggcaagacaactgaataatgagcaaccatgtga--agagagccaagacacatggaggaggaccaaaagaccctaccagcattcaccaccag------------------tagaccatcttggatcccttggccccagttgaactttttcagccaataccaggtgaaacagaga s panTro4.chr21 3628216 153 + 32799110 ggcaagacaactgaataatgagcaaccatgtga--agagagccaagacacatggaggaggaccaaaagaccctgccagcattcaccaccag------------------tagaccatcttggatcccttggccccagttgaactttttcagccaataccaggtgaaacagaga i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4393842 153 + 32716333 ggcaagacaactgaatgatgagcaaccatgtga--agagagccaagacacatggaggaggacaaaaagaccctgccaacattcaccaccag------------------tagaccatcttggatcccttgaccccagttgaactttttcagccaataccaggtgaaacagaga i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168508998 153 - 198365852 ggtgagacaactgaatgatgagcgaccatgtga--agagagccaagacacttggaggaggaccaaaagacactgccaacattcaccaccag------------------cagaccatcctggatcccttggtcccagttgaaatttctcagccaataccaggtgaaacagaga i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162171874 153 - 192294377 ggtgagacaactgaatgatgagcgaccatgtga--agagagccaagacacttggaggaggaccaaaagacactgccaacattcaccaccag------------------cagaccatcctggatcccttggtcccagttgaaatttctcagccaataccaggtgaaacagaga i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150856316 153 - 180432695 GGTGAGACAACTGAATGATGAGCGACCATGTGA--AGAGAGCCAAGACACTTGGAGGAGGACCAAAAGACACTGCCAACATTCACCACCAG------------------CAGACCATCCTGGATCCCTTGGTCCCATTTGAAATTTCTCAGCCAATACCAGGTGAAACAGAGA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14957328 153 - 90373283 ggtgagacaactgaatgatgagcgaccatgtga--agagagccaagacacttggaggaggaccaaaagacactggcaacattcactaccag------------------cagaccatcctggatcccttggtctcagttgaaatttctcagccaataccaggtgaaacagaga i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21884236 155 + 50472720 ggcaacacaactgaatgatgggcgaccacatgaagagagagccaagacacgtggaggaggaccggaagaccctggcaacattaatcaccag------------------tggactgtcttggatcccttggccccagttgaactttctcagtcaataccacgtgaaacagaga i calJac3.chr21 I 163 C 0 s canFam3.chr31 13782021 170 + 39895921 ggcaaaagaactaaa-aatgagagactacccaa--aaagaggcaagacatctggaaaagaatcaagatgccctgccaacattcagaaccaaggtcccagacacataagtgaggccatctttgattcttcagcccaagttaaaccaccccagccaacaccaggtaaaacagaga i canFam3.chr31 C 0 C 0 e mm10.chr16 78091491 552 + 98207768 I e ponAbe2.chr21 16880219 769 + 48394510 I a score=346754.000000 s hg38.chr21_KI270874v1_alt 15625 97 + 166743 caagccgtcccctctgagcactgcctgaattcctcacccacagaatcatgagtaataaaaca---gttattttaagtttctaagttttggagtggtttat s panTro4.chr21 3628369 97 + 32799110 caagccgtcccctctgagcactgcctgaattcctcacccacagaatcatgagtaataaaaca---gttattttaagtttctaagttttggagtggtttat i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16880988 95 + 48394510 caagccgtcccct-tgagca-tgcctgaattcctgacccacagaatcatgagtaataaaaca---gttattttaagtttctaagttttggagtggtttat i ponAbe2.chr21 I 769 C 0 s nomLeu3.chr25 4393995 97 + 32716333 caagccttccgctctgagcactgcctgaattcctgacccacagaatcatgagtaatagaaca---gttattttaagtttctaagttttggagtggtttat i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168509151 97 - 198365852 caagccataccctctgcgcactgcctgaattcctgacccacagaatcatgagtaataaaaca---gttattttaagtttctaagttttggagtggttcat i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162172027 97 - 192294377 caaaccataccctctgcgcactgcctgaattcctgacccacagaatcatgagtaataaaaca---gttattttaagtttctaagttttggagtggttcat i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150856469 97 - 180432695 CAAGCCATACCCTCTGCACActgcctgaattcctgacccacagaatcatgagtaataaaaca---gttattttaagTTTCTAAGTTTTGGAGTGGTTCAT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14957481 97 - 90373283 caagccataccctctgcgcactgcctgaattcctgacccacagaatcatgagtaataaaaca---gttattttaagtttctaagttttggagtggttcat i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21884391 97 + 50472720 caagccatcccatctgagcactgcctgaattcctgacccacagaattatgagtaaaaaaaca---gttattttaagttccaaagttttggagtggtttat i calJac3.chr21 C 0 C 0 s canFam3.chr31 13782191 100 + 39895921 caagccatccccactgggctctgcttgaattcctgatccacagaatcataaataataaaatgtttgttattttaagccactaagttttagggtggtttat i canFam3.chr31 C 0 C 0 e mm10.chr16 78091491 552 + 98207768 I a score=1583453.000000 s hg38.chr21_KI270874v1_alt 15722 431 + 166743 aatacagcaataggtaactaaAAGA-----GCTCAAAACTACTCCTAAAAGAACAGAGAAAATTGATACTGAGAACTCTGACATAAACCAGCTGGAATCATTTTAAAAATAAC-----TGTTACAGAATTGCCACATCTGAAATAATGAACATTTTGAATTGATTCCTAAA-AAAATAAGCACAGAAAATTTCAGACTAAAAGATAGCCAACCTCCAAGTATTTCTTGTCTAAACATGAATATATGGATATAAATATTGTTCACTTAGACTTTTTTAGAAAAATCATCAAAATGTCAAAGCATTTTAAACATTAATAAATATGATATAAATAATATATTTAAGTATATTATAATTTAAAGTGTTTTCACTTTTGT----ATAATCTTTGT--TCCATT-AAAAAAAAC-CTTCAATTTCTATAAACATTT---------------AAACTCATATAAA-AATAGTT s panTro4.chr21 3628466 429 + 32799110 aatacagcaataggtaactaaAAGA-----GCTCAAAACTACTCCTAAAAGAACAGAGAAAATTGATACTGAGAACTCTGACATAAACCAGCTGGAATCATTTTAAAAATAAC-----TGTTACAGAATTGCCACATCTGAAATAATGAACATTTTGAATTGATACCTAAA-AAAATAAGCACAGAAAATTTCAGACTAAAAGATAGCCAACCTCCAAGTATTTCTTGTCTAAACATGAATATATGGATATAAATATTGTTCACTTAGACTTTTTTAGAAAAATCATCAAAATGTCAAAGCattttaaacattaataaatatgatacaaataatagatttaagtatattataattttaaGTGTTTTCACTTTTGT----ATAATCTTTGT--TCCATT-AAAAAAAAC-CTTCAATTTC--TAAACATTT---------------AAACTCATATAAA-AATAGTT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16881083 430 + 48394510 aatacagcaatagataactaaaata-----ACCCAAAACTACTCCTAAAAGAACAGAGAAAATTGATACTGAGAACTCTGACATAAACCAGCTGGAATCATTCTAAAAATAAC-----TGTTACAGAATTGCCACATCTGAAATAATGAACATTTTGAATTGACACCTAAA-AAAATAAGCACAGAAAATTTCAGACTAAAAGATAGCCAACCTCCAAGTATTTCCTGTTTAAACATGAATATAAGGATATAAATACTGTTCACTTAGACTTTTTTAGAAAAATCATCAAAATGTCAAAACATTTTAAACATTAATAAATATGATACAAATAATAGATTTAAGTATATTATAATTTCAAGTATTTTCACTTTTGT----ATAATCTTTGT--TCCATT--AAAAAAAC-CTTCAATTTCTATAAACATTT---------------AAACTCATATAAA-AATAGTT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4394092 430 + 32716333 aatacagcaataggtaactaaAAGA-----GCCCAAAACTACTCCTAAAAGAACAGAGAAAATTGATACTGAGGACTCTGACATAAACCAGCTGGAATCATTTTAAAAATAAC-----TGTTACAGAATTGCCACATCTGAAATAATGAACATTTTGAATTGATACCTAAA-AAAATAAGCACAGAAAATTTCAGACTAAAAGATAGCCGACCTCCAAGTATTTCTTGTCTAAACATGAATACATGGATATAAATATTGTTCACTTAGACTTTTTTAGAAAAATCATCAAAATGTCAAAGCATTTTAAACATTAATAAATATGATACAAATAATAGATTTAAGTATATTATAATTTTAAGTGTTTTCACTTTTGT----ATAATCTTTGT--TCCATT--AAAAAAAC-CTTCAATTTCTATAAACATTT---------------AAACTCATATAAA-AATAGTT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168509248 434 - 198365852 aatacagcaatagataactaaAGGA-----GTTCAAAGCTACTCCTAAAAGAAGGGAGAAAATTGATACCGAGAACTCTGACATAAACCAGCTGGAATCATTTTAAAAATAAC-----CGTTACAGAAATGCTACATCTGAAATAATGAACACTTTGAATTGATACCTAAA-AAAATAAGCACAGAAAATTTCAGACTAAAAGATAGCCAACCTCCAAATATTTCTTGTCTAAACATG-ATATGTGGATACAAATATTGTTCACTTCGACTTTTTTAGAAAAATCATCAAAATGTCAAAGCATTTTAAACATTTATAAATATGATACAAATAATAGATTTAAGTATATTATAACTTTAAGTGTTTTCACTTTTATATAAATAATCTTTGT--TCCATT-AAAAAAAAA-CTTCAATTTCTATAAACATTT---------------AAACTCATATAAA-AATAGTT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162172124 434 - 192294377 aatacagcaatagataactaaAGGA-----GTTCAAAGCTACTCCTAAAAGAAGGGAGAAAATTGATACCGAGAACTCTGACATAAACCAGCTGGAATCATTTTAAAAATAAC-----CGTTACAGAAATGCTACATCTGAAATAATGAACACTTTGAATTGATACCTAAA-AAAATAAGCACAGAAAATTTCAGACTAAAAGATAGCCAACCTCCAAATATTTCTTGTCTAAACATG-ATATGTGGATACAAATATTGTTCACTTCGACTTTTTTAGAAAAATCATCAAAATGTCAAAGCATTTTAAACATTTATAAATATGATACAAATAATAGATTTAAGTATATTATAACTTTAAGTGTTTTCACTTTTATATAAATAATCTTTGT--TCCATT-AAAAAAAAA-CTTCAATTTCTATAAACATTT---------------AAACTCATATAAA-AATAGTT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150856566 433 - 180432695 aatacagcaatagataactaaagGA-----GTTCAAAGCTACtcctaaaagaagagagaaaattgatATCGAGAACTCTGACATAAACCAGCtggaatcattttaaaaataac-----cgtTACAGAAATGCTACATCTGAAATAATGAACACTTTGAATTGATACCTaaa-aaaataagcacagaaaaTTTCAGACTAAAAGATAGCCAACCTCCAAATATTTCTTGTCTAAACATG-ATATGTGGATACAAATATTGTTCACTTCGACTTTTTTAGAAAAATCATCAAAATGTCaaagcattttaaacatttataaatatgatACAAATAATAGATTTAAGTATCTTATAACTTTAAGTGTTTtcacttttatataaataatctttgt--tccatt--aaaaaaaa-cttcaatttCTATAAACATTT---------------AAACTCATATAAA-AATAGTT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14957578 437 - 90373283 aatacagcaatggataaATAAAGGA-----GCTCAAAGCTACTCCTAAAAGAAGAGAGAAAATTGATACAGAGAACTCTGACATAAACCAGCTGGAATCATTTTAAAAATAACAGAAAAGTTACAGAAATGCTACATCTGAAATAATGAACACTTTGAATTGATACCTAAA-AAAATAAGCACAGAAAATTTCAGACTAAAAGATAGCCAACCTCCAAATATTTCTTGTCTAAACATG-ATATGTGGATACAAATATTGTTCACTTCGACTTTTTTAGAAAA---ATCAAAATGTCAAAGCATTTTAAACATTTATAAATATGATACAAATAATAGATTTAAGTATATTATAACTTTAAGTGTTTTCACTTTTATATAAATAATCTTCGT--TCCATT-AAAAAAAAACCTTCAATTTCTATAAACATTT---------------AAACTCATATAAA-AATAGTT i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21884488 433 + 50472720 agtactgcaatacttaactaaaaGA-----GCTTGAAACTACTTCTAAAAGAACAGAGAAAATTGATACTAAGAACTTTGACACAAACCAACTGGAATCATTTTATGAATAAC-----TGTTACAAAATTGCTACATCTGAAATAATGAACATTTTGAATTG---CTTTAA-AAAATAAGCACATAATATTTCAGACTAAAAGACAGCAGACCTCCAAGTGGTTCTTGTCTAAACACAAATATATGGATATAAATATTGATCAGTTAGACTTTTTTAGAAAGATCATCAAGATGTCAAGGCATTTTAAACATTAATAAGTGTGATACAAATAAAAAATTTAAGTATATTACAATTTTCAGTGTTTTTACTTTTATATAAATAATCTTTGT--TCCATTTAAAAAAAAC-CTTCAATTTCTATAAACATTT---------------AAACTCACATAAA-AATAGTA i calJac3.chr21 C 0 C 0 s mm10.chr16 78092043 422 + 98207768 AATAGAGCAAAAAGTAACTAAAAGAAAGGGGAAAAAATCTGCTTCTAAAAGTACTAAAAAAAATTATGTTGAATACTATGAAAT-----GGCTATAATCGTGGTATGGATCAC-----TATTCAAAAACTACTCCATC-------ATGAACATACGGCCCTAACGTCTAAAGAAAATAAGCACC-AAAGTTTCAAAGGAAAGGAGAGCAGACCTCCCAGCACGTCTTGTCTAAACCAGAGTACATGGGTATAAATATTGTTCCGTTTAATGTTGTTAGAAAAATCATCAAGATGTCAGAGCA-GTTAAACATTAATAAGTGTGATAAAAATGATAGGCTTGAGTGAGT-----ATCTATGTCTGTGCATGCTTGTATAAACAACCTCTGT--AGCGTT-TTTACAAAT-CTCCCATTTCTATCAACATTC----------------AGCTCACATAAAGAATAGTT i mm10.chr16 I 552 I 286 s canFam3.chr31 13782291 451 + 39895921 agcatagcaatatataactaaaaGAAT---GCTCAAAACAGATCTTGAAAGAACAGAGAAACCTGATGCTATGTACTCTGAAATAGACCAAATGGAATCATTTTACCAAAAGC-----TTTTACAAAA-TGCTTCATCTATAGTAAAGTACATTTTATATTAACATATAA--AAAATAAGCACAGAAGTTTTCAGACAAAAAGAAAGCAGACCTCCCACTATTTCTTGTCTAAACTTGAATGTATGGATATAAATATTATTCAGTTTAACTTTGTTAGAAAAATCAGCAAGATGTCAGAGCAATTTAAACATGAATAAGTGTGATACAAACGATATGCTTGAGTATATTACAATTTTAAATGTCTCTACTTTTATCTAAAGAATCTAAATAAACCATT--AAAAAAAT-CTCCAATTTCTATAAACATTTAAGAATTAAACACTTAAACTCATGTAAA-AATAGTA i canFam3.chr31 C 0 C 0 a score=126891.000000 s hg38.chr21_KI270874v1_alt 16153 41 + 166743 ATTAGTAAGTAAGTCAACTAGGAGA--TGGATTCCCAGCAAAA s panTro4.chr21 3628895 41 + 32799110 ATTAGTAAGTAAGTCAACTAGGAGA--TGGATTCCCAGCAAAA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16881513 41 + 48394510 CTTAGTAAGTAAGTAAACTAGGAGA--TGGATTCCCAGCAAAA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4394522 41 + 32716333 ATTAGTAAGTAAGTAAACTAGGAGA--TGGATTCCCAGCAAAA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168509682 41 - 198365852 ATTAGTAAGTAAGTAAACCAGGAGA--TGAATTCCCAGCAAAA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162172558 41 - 192294377 ATTAGTAAGTAAGTAAACCAGGAGA--TGAATTCCCAGCATAA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150856999 41 - 180432695 ATTAGTAAGTAAGTAAACCAGGAGA--TGAATTCCCAGCAAAA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14958015 41 - 90373283 ATTAGTAAGTAAGTAAACCAGGAGA--TGAATTCCCAGCAAAA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21884921 42 + 50472720 ATTGGTGAGTAATTAAACTAGGAGA-CTTCATTCCCAGAAAAA i calJac3.chr21 C 0 C 0 s canFam3.chr31 13782742 42 + 39895921 ATCAGTAAGTAAGTAAATTAAAAAGATTTAATTCTTAGTAAA- i canFam3.chr31 C 0 C 0 e mm10.chr16 78092465 286 + 98207768 I a score=1665210.000000 s hg38.chr21_KI270874v1_alt 16194 437 + 166743 TTCAACTAGCTATTTCTGGGACA--------------------------------------------GTCCACTG-ATAATATGAACTTAAGATCAACTGATCTTCTGAAAGGTACAATTTC-AAATCAAGCAGAAGAGGTAA-CAGTTTTTAGGAATTC-TTTTTTTTCCAATTTAGTGAGA--TAAAAATGCGCTCATTTAGATGCCAAA-ATCATTTAAAGCTTGTGTAATG------AATGTAAAAATAAATACACTCTAAGACTGAATTCAATTCCACCTGAATATATTACAGGGAGAATATGTCACATCCAATATTGAGGGAAACACGAAGCTTCTTAGGAAATGTAAATATTTCTACTTTAGCAAGTCTAATCTCATTCATCATCATCAGT--GTGTCCCCTCCACCCCAACC------Aaaa---aagaagaagaagaagaaATAGTTTGGAAAGAGTCCAAAGATCATTCAAAGTGAACC-AAAAAAAATCCTATTA s panTro4.chr21 3628936 440 + 32799110 TTCAACTAGCTATTTCTGGGACA--------------------------------------------GTCCACTG-ATAATATGAACTTAAGATCAACTGATCTTCTGACAGGTACAATTTC-AAATCAAGCAGAAGAGGTAA-CAGTTTTTAGGAATTC-TTTTTTTTCCATTTTAGTGAGA--TAAAAATGCACTCATTTAGATGCCAAA-ATCATTTAAAGCTTGTGTAATG------AATGTAAAAATAAATACACTCTAAGATTGAATTCAATTCCACCTGAATATATTACAGGGAGAATATGTCACATCCAATATTGAGGGAAACATGAAGCTTCTTAGGAAATGTAAACATTTCTACTTTAGCAAGTCTAATCTAATTCATCATCATCAGT--GTGTCCCCTCCACCCCAACC------AaaaaagaagaagaagaagaagaaATAGTTTGGAAAGAGTCCAAAGATCATTAAAAGTGAACC-AAAAAAAATCCTATTA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16881554 437 + 48394510 TTCAACTAGCTATTTTTGGGACA--------------------------------------------GTCCACTG-ATAATATGAACTTAAGATCAACTGATCTTCGGAAAGGTACAATTTC-AAATCAAGCAGAAAAGGTAA-CAGTTTTTAGGAATTCTTTTTTTTTCCATTTTAGTGAGA--TAAAAATGCACTCATTTAGATGCCAAA-ATCATTTAAAGCTTGTGTAATG------AATGTAAAAATAAATACACTTTAAGACGGAATTCAATTCCACCTGAATATATTACAGGGAGAATATGTCACAACCAATATTGAGGGAAACACGAAGCTTCTTAGGAAATGTAAACATTTCTACTTTAGCAAGTCTAATCTGATTCATCATCATCAGT--GTTTCCCCTCCACCCCGACC------AAAA---AAAAAGAAGAAGAAGAAATAGTTTGGAAAGAGTCCAAAGATCATTAAAAGTGAACC--AAAAAAATCCTATTA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4394563 438 + 32716333 TTCAACTAGCTATTTTTGGGACA--------------------------------------------GTCCACTG-ATAATATGAACTTAAGATCAACTGATCTTCTGAAAGGTACAATTTC-AAATCAAGCAGAAGAGGTAA-CAGTTTTTAGGAATTC-TTTTTTTTCCATTTTAGTGAGA--GAAAAATGCACTCATTTAGATGCCAAA-ATCATTTAAAGCTTGTGTAATG------AATGTAAAAATAAATACACTTTAAGATTGAATTCAATTCCACCTGAATATATTACAGGGAGAATATGTCACATCCAATATTGAGGGAAACACGAAGCTTCTTAGGAAATGTAAACATTTCTACTTTAGCAAGTCTAATCTGATTCATCATCATCAGT--GTGTCCCCTCCACCCCGACC------AAAA---AAAAGGAAGAAGAAGAAATAGTTTGGAAAGAGTCCAAAGATCATTAAAAGTGAACCAAAAAAAAATCCTATTA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168509723 447 - 198365852 TTCAACTAGCTATTTTTGGGAAA--------------------------------------------GTCCACTG-ATAATATGAACTTAAGATTAACTGATCTCCTGAAAGGTGCAATTTC-AAATCAAGCAGAAGAGGTAA-CATTTTTTAGGAATTC--TTTTTTTCCATTTTAGTGAGA--TAAAAACTCACTCATTTAGATGCCAAA-ATCATTTAAAGCTTGTGTAATGATTATAAATGTAAAAATAAATATACTTTAAGATTGAATTCAATTCCACCTGAATATATTATAGGGAGAATATGTCACATCCAATATTGAGGGAAACATGAAGCTTCTTAGGAAATGTAAACGTTTCTACTTTAGCAAGTCTAATCTGATTCATCATCATCAGT--GTGTCCCCTCCACCGCGACC--AAAAAAAA---AAAAAGAAGAAGAAGAAATAGTTTGGAAAGAGTCCAAAGATCATTAAAAGTGAACCAAAAAAAAAGCCTGTTA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162172599 443 - 192294377 TTCAACTAGCTATTTTTGGGAAA--------------------------------------------GTCCACTG-ATAATATGAACTTAAGATTAACTGATCTTCTGAAAGGTGCAATTTC-AAATCAAGCAGAAGAGGTAA-CATTTTTTAGGAATTC--TTTTTTTCCATTTTAGTGAGA--TAAAAACTCACTCATTTAGATGCCAAA-ATCATTTAAAGCTTGTGTAATG------AATGTAAAAATAAATATACTTTAAGATTGAATTCAATTCCACCTGAATATATTATAGGGAGAATATGTCACATCCAATATTGAGGGAAACATGAAGCTTCTTAGGAAATGTAAACGTTTCTACTTTAGCAAGTCTAATCTGATTCATCATCATCAGT--GTGTCCCCTCCACCGCGACCaaaaaaaaaa---aaaaagaagaagaagaaaTAGTTTGGAAAGAGTCCAAAGATCATTAAAAGTGAACCAAAAAAAAAGCCTGTTA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150857040 437 - 180432695 TTCAACTAGCTATTTTTGGGAAA--------------------------------------------GTCCACTG-ATAATATGAACTTAAGATTAACTGATCTTCTGAAAGGTGCAATTTC-AAATCAAGCAGAAGAGGTAA-CATTttttaggaattc--tttttttccattttagtgAGA--TAAAAACTCACTCATTTAGATGCCAAA-ATCATTTAAAGCTTGTGtaatg------aatgtaaaaataaatatactttaagaTTGAATTCAATTCCACCTGAATATATTATAGGGAGAATATGTCACATCCAATACTGAGGGAAACATGAAGCTTCTTAGGAAATGTAAACGTTTCTACTTTAGCAAGTCTAATCTGATTCATCATCATCAGT--GTGTCCCCTCCAccgagacc------aaaa---aaaaaaaagaagaagaaatagtttggaaagagtccaaagatcattaaaagtgaaccaaaaaaaaaccctgtta i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14958056 440 - 90373283 TTCAACTAGCTATTTTTGGGAAA--------------------------------------------GTCCACTG-ATAATATGAACTTAAGATTAACTGATCTTCTGAAAGGTGCAATTTC-AAATCAAGCAGAAGAGGTAA-CATTTTTTAGGAATTC--TTTTTTTCCATTTTAGTGAGA--TAAAAACTCACTCATTTAGATGCCAAA-ATCATTTAAAGCTTGTGTAATG------AATGTAAAAATAAATATACTTTAAGATTGAATTCAATTCCACCTGAATATATTATAGGGAGAATATGTCACATCCAATATTGAGGGAAACATGAAGCTTCTTAGGAAATGTAAACGTTTCTACTTTAGCAAGTCTAATCTGATTCATCATCATCAGT--GTGTCCCCTCCACTGTGACC---AAAAAAA---AAAAAGAAGAAGAAGAAATAGTTTGGAAAGAGTCCAAAGATCATTAAAAGTGAACCAAAAAAAAAGCCTGTTA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21884963 442 + 50472720 TTTAACTGGCTATTTTTGGGAAA--------------------------------------------GTCCACTG-ATAGTATGAACTTAAGATTAACTGATCTTCTACAAGGTGCAATTTC-AAATCAAGCAGAAGAGGTAAGTTTTTTTTAGGAATTC-CTTCTTTTTCATTTTAGTGAGA--TAAAAATGCACTCATTTAGATGTCAAA-ATTGTTTAAAACTTGTGTAATG------AATGTAAAAATAAATACACTTCAAGGTTGAATTCAATTCAACCTCAATATATTACAAGGAGAATATGTCACATCCAGT-TAGAGGGAAACATGAAACTTCTAAGGAAATGTAAACATTTCTACTTTAGCAAGTCTAATCTGATTCATCATCATCCGTCAGTGTCCTC-CCACCTCAACC--AAAAAAAA---AAAAAAAAGAAGAAGAAATAGTTTGGAAAGTGTCCAAAGATCATTAAAAGTGAACC-CAAAAAAATCCTATTG i calJac3.chr21 C 0 C 0 s mm10.chr16 78092751 411 + 98207768 cTCAACTGGCTGTTTTT-AAAAG--------------------------------------------GTCCACAGAATAATATGAATCTA-----AACTGAT----TGAAGGTCACAATATC-AAATCAATTAGAATGAATCC-CCTTTTT-----------TTATTTTCCATTTTACTGAAATTTTAGAAAGCTCTCATTTTTATGTCAGATTTCCTTGAAAGCTGATGTAATG------AGTGTAAAAATAAACACATTTGAAGTTCAAATTCAATTTCACCTGAATATATTATGGAGCAAGCCTGTCACATCCAATGCTGAGGGAAACAGGAGGCTTCTTCAGAAATGTAAACGTTTCTACTTTAGCAAGTCTAACCTGATTATCCATCATCCAT--GAGT------------aaaa--aaaaaaaa---aaaaaaaaaaaaaaagaaTATTTTAGAAAGCATCCAAGTATCATCAAAACTAAC---AATAGAGATGCTCTGG i mm10.chr16 I 286 C 0 s canFam3.chr31 13782784 448 + 39895921 CTCAACTGGCAATTTTTTAAAAGACTACtatttttttaattttaagaattttttaagataaaaatCTATCTACTG-ATAATATGAACTTA-----AACTGAACTTCTGAAAGGTGTGATTTCAAAATCAAGCAGAGGAAGTAA-CATGTTTTAGAAATAC--TTTTTCCCCA-TCTAGCGAGA--TGAAAATGCACTCTTGTAGATGCCAAA-CTTCTTTAGAGCTTGTGTAATG------AATATAAAAGTAAACACATTTCAAGTTTGAATTCAATTCCACCTGAATATATTACAGGGCAAGTATGTCACATCCAATATTGAAGGAAACATACGGCTTCTTAAGAAATGTAAACATTTCTACTTTAGCAAGTCTAATCTGATTCATCATCATCAGT--AAGT-------------ACA------AAAA---AA--------------AATAGTTTGGAAAGATTCCAAAAATCATTAAAAGTGACAG-GGAAAAAATGCTATTA i canFam3.chr31 C 0 C 0 a score=2278.000000 s hg38.chr21_KI270874v1_alt 16631 10 + 166743 ATTTTGCATT s panTro4.chr21 3629376 10 + 32799110 ATTTTGCATT i panTro4.chr21 C 0 C 0 s mm10.chr16 78093162 10 + 98207768 ATTTCACATT i mm10.chr16 C 0 I 9 e calJac3.chr21 21885405 0 + 50472720 C e canFam3.chr31 13783232 0 + 39895921 C e rheMac3.chr3 168510170 0 - 198365852 C e ponAbe2.chr21 16881991 0 + 48394510 C e chlSab2.chr2 14958496 0 - 90373283 C e macFas5.chr3 162173042 0 - 192294377 C e papAnu2.chr3 150857477 0 - 180432695 C e nomLeu3.chr25 4395001 0 + 32716333 C a score=502274.000000 s hg38.chr21_KI270874v1_alt 16641 5539 + 166743 TTGCAAAAAGgagggaagagccaagatggccgaataggaacagctccggtctacagttctcagtgtgagcgacgcagaagacgggtgatttctgcatttccatccgagctttgaagagagcagtggttctcccagcacgcagctggagatctgagaacgggcagactgcctcctcaagtgggtccctgacccctgacccccgagcagcctaactgggaggcaccccccagtaggggcagactgacacctcacacggccgggtactccaacagacctgcagctgaaggtcctgtctgttagaaggaaaactaacaaacagaaaggacatccacaccaaaaacccatctgtacatcaccatcatcaaagaccaaaagtagataaaaccaccaagatggggaaaaaacaaagcagaaaaactggaaactttaaaaagcagagcgcctctcctcctccaaaggaacacagctcctcaccagcaacggaacaaagctggatggagaatgactttgacgagctgagagaagaagacttcagacgatcaaattactccgagctatgggaggacattcaaaccaaaggcaaagaagttgaaaactttgaaaaaaatttagaagaatgtataactagaataaccaatacagagaagtgcttaaaggagctgatggagctgaaaaccaaggctcgagaactacgtgaagaatgcagaagcctcaggagctgatgcaaccaactggaagaaagggtatcagtggtggaagatgaaatgaatgaaatgaagcgagaaggaagtttagagaaaaaagaataaaaagaaatgagcaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctgattggtgtacctgaaagtgacggggagaatggaaccaagttggaaaacactctgcaggatattatccaggagaacttccccaacctatcaagacaggccaacgttcagattcaggaaatacagagaacgccacaaagatattactcaagaagagcaactccaagacacataattgtcagattcaccaaagttgaaatgaaggaaaaaatgttaaggacagccagagagaaaggtcgggttaccctcaaagggaagcccatcagactaacagcggatctctcggcagaaaccctacaagccagaagagagtgggggccaatattcaacattcttaaaggaaagaattttcaacccagaatttcatatccagccaaactaagcttcataagtgaaggagaaataaaatactttacagataagcaaatgctgagagattttgtcaccaccaggcctgccctaaaagagctcctgaaggaagagctaaacatggaaaggaaccaccggtaccagccactgcaaaatcatgccaaaatgtaaagaccatcaagactaggaagaaactgcatcaactaacgagcaaaatcaccagctaacatcatagtgacaggattaaattcacacataacaatattaactttaaatgtaaatggactaaatgctccaattaaaagacacagactggcaaattggataaagagtcaagacccatcagtgtgctgtattcaggagacacatctcacgtgcagagacacacataggctaaaataaaaggatggaggaagatctatcaagcaaatggaaaacaaaaaaaggcaggggttgcaatcctagtctcggataaaatagactttaaaccaacaaagatcaaaagagacaaagaaggccattacataatggtaaagggatcaattcaacaagaagagctaactatcctaaatatatatgcacccaatacaggagcacccagattcataaagcaagtccttagagacctacaaagagacttagactcccacacaatcataatgggagactttaacaccccactgtcaacattacacagatcaacgagacagaaagtcaacaagaatacccaggaattgaactcagccctgcaccaagtggacctaatagacatctacagaactctccaccccaaatcaacagaatataca-tttttttcagcaccacaccacacctattccaaaattaaccacatacttggaagtaaagctctcctcagcaaatgtaaaagaacagaaattataacaaactatctctcagaccacagtgcaatcaaactagaactcaggattaagaatctcactcaaaactgatcaactacatagaaactgaacaacctgctcctgaatgactactgggtacataacgaaatgaaggcagaaataaagatgttctttgaaaccaatgagaacaaagacacaacataccagaaactctgggacacattcaaagcagtgtgtagagggaaatttatagcactaaatgcccacaagagaaagcaggaaagatccaaaattgacaccctaacatcacaattcaaagaactagaaaagcaagagcaaaacacattcaaaagctagcagaaggcaagaaataactaaaatcagagcagaactgaaggaaatagagacacaaaaaacccttcaaaaattaatgaatccaggagctggttttttgaaaggatcaacaaaattgatagaccgctagcaagactaataaagaaaaaaagaagaatcaaatagatgcaataaaaaatgataaaggggatatcaccaccgatcccacagaaatacaaactaccatcagagaatactataaacacctctatgcaaataaactagaaaatcaagaataaatggataaattccttgacacatacaccctcccaagactaaaccaggaagaagttgaatctctgaatagcccaataataggatctgaaattgtggcaataatcaatagcttaccaaccaaaaagagtccaggaccagatggattcacagccgaattctaccataggtacaaggaggaactggaatcattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactcattttatgagaccagcatcatcctgataccaaagccgggcagagacacaaccaaaaaagacaaatatccttgatgaacattgatgcaaaaatcctcaataaaatactggcaaaatgaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcactatatgcaaatcaataaatgtaatccagcatataaacagaaccaaagacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaattcaacaacccttcatgctaaaaactctcaataaattaggtattaatgggacgtacttcaaaataataagagctatctatgacaaacccacagccaatatcataccgaatgggcaaaaactggaagcattccctttgaaaactggcacaagacagggatgccctctctcaccactcctattcaacatagtgttggaagttctggccagggcaattaggcaggagaaagaaataaagggtattcaataaggaaaagaggaagtcaaattgtccctgtttgcagacgacatgattgtatatctagaaaaccccattgtctcaggccaaaatctccttaagctgataagcaacttcagc--agtctcaggatacaaaatcaatgtacgaaaatcacaagcattcttatacacaaacaacagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatacttaggaatccaacttacaagggacatgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaagaggatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatttacagattcaatgccatccccatcaagctaccaatgactttcatcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcctgcatcaccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaatagagatatagatcaatggaacagaacagagccctcagaaataacgcagcatatctacaactatctgatctttgacaaacctgagaaaaacaagcaatggggaaaggattccctatttaataaatggtgctgggaaaactggctagccatatggagaaagctgaaactagatcccttccttacaccttatacaaaaatcaattcaagatggattaaagacttaaacgttagacctaaaaccataaaaacccaagaagaaaacctaggcattaccattcaggacataggtatgggcaaggacttcatgtctgaaacaccaaaagcaatggcaacaaaagacaaaattgacaaatgggatctaattaaactaaagagcttctacacagcaaaataaactaccatcagagtgaacaggcaacctacaaaatgggagaaaattttcgcaacttactcatctgacaaagggctaatatccagaatctagaatgaactcaaacaaatttacaagaaaaaaaaaaacaaccccatcaaaaagtggccaaaggacatgaacagacaattctcaaaagaagacatttatgcagccgaaaaacacatgaaaaaatgctcaccatcactggccatcagagaaatgcaaatcaaaaccacaatgagataccatctcacaccagttagaatggcaatcattaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaataggaatacttttacactgttggtgagactgtaaactagttcaacccttgtggaagtcagtgtggtgattcctcagggatctagaactagaaataccatttgacccagccatcccattactgggtatatacccaaaggactataaatcatgctgctttaaagacacatgcacatgtatgtttattgcagcactattcacaatagcaaagacttggaaccaacccaaatgtccaacaatgatagactggattaagaaaatgtggcacatatacaccacgggatactatgcagccat-aaaaaatgatgagttcacgtcctttgtagggacatggatgaaattggaaatcatcattctcaataaactatcgcaagaacaaaaaaccaaacaccgcatattctcactcataggtgggaattgaacaatgagaacacatggacacaggaaggggaaaatcacactctggggactgtt-tggggtggggggaggctggagggatggcattgggagatatacctaatgctagatgatgagttagtgggtgcagcgcaccagcaaggcacatgtatacatatgtaactaacctgtacattgtgcacatgtaccctaaaacttaaagtataataataaaaaataaa-TTTAAAAAATAAAGGTGAAAAAGACACAAAGGAAAAAAAT s panTro4.chr21 3629386 5515 + 32799110 TTGGAAAAAGgagggaagagccaagatggccgaataggaacagctccggtctacagttcccagtgtgagcgacgcagaagacgggtgatttctgcatttccatctgagctttgaagagagcagtggttctcccagcacgcagctggagatctgagaacgggcagactgcctcctcaagtgggtccctgacccctgacccccgagcagcctaactgggaggcaccccccagtaggggcagactgacacctcacacggccaggtactccaacagacctgcagctgagggtcctgtctgttagaaggaaaactaacaaacagaaaggacatccacaccaaaaacccatctgtacatcaccatcatcaaagaccaaaagtagataaaaccacaaagatggggaaaaaaccaagcagaaaaactggaaactttaaaaagcagagcgcctctcctcctccaaaggaacacagttcctcaccagcaacggaacaaagctggacggagaatgactttgacgagctgagagaagaaggcttcagacgatcaaattactccgagctacgggaggacattcaaaccaaaggcaaagaagttgaaaactttgaaaaaaatttagaagaatgtataactagaataaccaatacagagaagtgcttaaaggagctgatggagctgaaaaccaaggctcgagaactacgtgaagaatgcagaagcctcaggagctgatgcgaccaactggaagaaagggtatcagcgatggaagatgaaatgaatgaaatgaagcaagaaggaagtttagagaaaaaagaataaaaagaaatgagcaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctgattggtgtacctgaaaatgacggggagaatggaaccaagttggaaaacactctgcaggatattatccaggagaacttccccaacctagcaaggcaggccaacgttcagattcaggaaatacagagaatgccacaaagatattactcaagaagagcaactccaagacacataattgtcagattcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaaggtcgggttaccctcaaagggaagcccatcagactaacagtggatctctcggcagaaaccctacaagccagaagagagtgggggccaatattcaacattcttaaaggaaagaattttcaacccagaatttcatatccagccaaactaagcttcataagtgaaggagaaataaaatactttacagacaagcaaatgctgagagattttgtcaccaccaggcctgccctaaaagagctcctgaaggaagagctaaacatggaaaggaaccactggtaccagccactgcaaaatcatgccaaaatgtaaagaccatcaagactaggaagaaactgcatcaactaatgagcaaaataaccagctaacatcatagtgacaggattaaattcacacataacaatattaactttaaatgtaaatggactaaatgctccaattaaaagacacagactggcaaattggataaagagtcaagacccatcagtgtgctgtattcaggagacacatctcacgtgcagagacacacataggctaaaataaaaggaaggaggaagatctaccaagcaaatggaaaacaaaaaaaggcaggggttgcaatcctagtctctgataaaatagactttaaaccaacaaagatcaaaagagacaaagaaggccattacataatggtaaagggatcaattcaacaagaagaactaactatcctaaatatatatgcacccaatacaggagcacccagattcataaagcaagtccttagagacctacaaagagacttagactcccacacaatcataatgggagactttaacaccccactgtcaatattagacagatcaatgagacagaaagtcaacaagaatacccaggaattgaactcagccctgcaccaagtggacctaatagacatctacagaactctccaccccaaatcaacagaatatacattttttttcagcaccacaccacacctattccaaaattaaccacatacttggaagtaaagctctcctcagcaaatgtaaaagaacagaaattataacaaactatctctcagaccacagtgcaatcaaactagaactcaggattaagaatctcactcaaaactgatcaactacatagaaactgaacaacctgctcctgaatgactactgggtacataacgaaatgaaggcagaaataaagatgttctttgaaaccaatgagaacaaagacacaacataccagaatctctgggacacattcaaagcagtgtgtagagggaaatttatagcactaaatgcccacaagagaaagcaggaaagatccaaaattgacaccctaacatcacaattaaaagaactagaaaagcaagagcaaaacacattcaaaagctagcagaaggcaagaaataactaaaatcagagcagaactgaaggaaatag-gacacaaaacaccttcaaaaaattaatgaatccaggagctggttttttgaaaggatcaacaaaattgatagaccgctagcaagactaataaagaaaaaaagaagaatcaaatagatgcaataaaaaatgataaaggggatatcaccaccgatcccacagaaatacaaactaccatcagagaatactataaacacctctatgcaaataaactagaaaatctagaataaatggataaattccttgacacatacaccctcccaagactaaaccaggaagaagttgaatctctgaatagaccaataataggatctgaaattgtggcaataatcaatagcttaccaaccaaaaagagtccaggaccagatggattcacagccgaactctaccagaggtacaaggaggaactgggaccattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactcatttt--------------------------aagccgtgcagagacacaaccaaaaaagacaaatatccttgatgaacattgatgcagaaatcctcaataaaatactggcaaaacgaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcaatatacgcaaatcaataaatgtaatccagcatataaacagaaccaaagacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaattcaacaacccttcatgctaaaaactctcaataaattaggtattaatgggacgtacttcaaaataataagagctatctatgacaaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaaactggtacaagacagggatgccctctctcaccactcctattcaacatagtgttggaagttctggccagggcaattaggcaggagaaagaaataaagggtattcaataaggaaaagaggaagtcaaattgtccctgtttgcagatgacatgattgtatatctagaaaaccccattgtctcaggccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtacgaaaatcacaagcattcttatacaccaacaacagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagggacgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaagaggatacaaacaaatggaagaacgttccatgctcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatttacagattcaatgccatccccatcaagctaccaatgactttcatcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcccacatcgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtacttgtaccaaaacagagatatagatcaatggaacagaacagagccctcagaaatactgccgcatatctacaac-atctgatctttgacaaacctgagaaaaacaagcaatggggaaaggattccctatttaataaatggttctgggaaaactggctagccatatggagaaagctgaaactagatcccttccttacaccttata-aaaaatcaattcaagatggattaaagacttaaacgttagacctaaaatgataaaaaccctagaagaaaacctaggcattaccattcaggacataggtatgggcaaggatttcatgtctgaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctacacagcaaaagaaactaccatcagagtgaacaggcaacctacaaaatgggagaaaattttcgcaacctactcatctgacaaagggctaatatccagaatctataatgaactcaaacaaatttacaag-aaaaaaaaaacaaccccattaaaaagtggccaaaggacatgaacagacaattctcaaaagaagacatttatgcagccaaaaaacacatgaaaagatgctcaccatcactggccatcagagaaatgcaaatcaaaaccacaatgagataccatctcacaccagttagaatggcaatcattaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaataggaatacttttacactgttggtgggactgtaaactagttcaacccttgtggaagtcagtgtggtgattcctcagggatctagaactagaaataccatttgacccagccatcccattactgggtatatacccaaaggactataaatcatgctgctataaagacacatgcacacgtaggtttattgcggcactattcacaatagcaaagacttggaaccaacccaaatgtccaacaatgatagattggattaagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaaatgatgagttcacgtcctttgtagggacatggatgaaattggaaatcatcattctcaataaactatcgcaagaacaaaaaaccaaacaccacatattctcactcataggtgggaagtgaacaatgagaacacatggacacaggaaggggaacatcacactctggggactgttgtggggtggggggaggctggagggatggcattgggagatatacctaatgctagatgacgagttagtgggtgcagcgcaccagcaaggcacatgtatacatatgtaactaacctgtacattgtgcacatgtaccctaaaacttaaagtataataataaaaaataaaTTTTAAAAAATAAAGGTGAAAAAGACACAAAGGAAAAAAAT i panTro4.chr21 C 0 C 0 e calJac3.chr21 21885405 0 + 50472720 C e canFam3.chr31 13783232 0 + 39895921 C e mm10.chr16 78093172 9 + 98207768 I e rheMac3.chr3 168510170 0 - 198365852 C e ponAbe2.chr21 16881991 0 + 48394510 C e chlSab2.chr2 14958496 0 - 90373283 C e macFas5.chr3 162173042 0 - 192294377 C e papAnu2.chr3 150857477 0 - 180432695 C e nomLeu3.chr25 4395001 0 + 32716333 C a score=49950.000000 s hg38.chr21_KI270874v1_alt 22180 12 + 166743 ATTTTGCATTTT s panTro4.chr21 3634901 12 + 32799110 ATTTTGCATTTT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16881991 12 + 48394510 ATTTTGCATTTT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4395001 12 + 32716333 ATTTTGCATTTT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168510170 12 - 198365852 ATTTTGCATTTT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162173042 12 - 192294377 ATTTTGCATTTT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150857477 12 - 180432695 attttgcatttt i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14958496 12 - 90373283 ATTTTGCATTTT i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21885405 12 + 50472720 ATTTTGCATTTT i calJac3.chr21 C 0 C 0 s canFam3.chr31 13783232 12 + 39895921 ATTTTGCATTTT i canFam3.chr31 C 0 C 0 e mm10.chr16 78093172 9 + 98207768 I a score=820970.000000 s hg38.chr21_KI270874v1_alt 22192 209 + 166743 GACTATAGAATTAGCAACAGGAAGGCA-TTTTAATTAAGGTTACACTCATTTCATATTATATTTTCTAATCTGTTATTGTTATGAGGCATATGTGCTCCTGGCAATATGGTGAAGAGAATCTCTCTGAATATTGATCTTTCTTCCTGAGGGAAAGTGC------TCATGATTTCTATGGCGAGACTAGTG---GGGGCCATGGAGTGAAGTGGCACAAC s panTro4.chr21 3634913 209 + 32799110 GACTATAGAATTAGCAACAGGAAGGCA-TTTTAATTAAGGTTACACTCATTTCATATTATATTTTCTAATCTGTTATTGTTATGAGGCATATGTGCTCCTGGCAACATGGTGAAGAGAATCTCTCTGAATATTGATCTTTCTTCCTGAGGGAAAGTGC------TCATGATTTCTATGGCGAGACTAGTG---GGGGCCATGGAGTGAAGTGGCACAAC i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16882003 209 + 48394510 GACTATAGAATTAGCAACAGGAAGGCA-TTTTAATTAAGGTTACACTCATTTCATATTATATTTTCTAATCTGTTATTGTTATGAGGCATATGTGCTCCTGGCAACGTGATGAAGAGAATCTCTCTGAATATTGATCTTTCTTCCTGAGGGAAAATGC------TCATGATTTCTATGGAGGGACTAGTG---GGGGCCATGGAGTGAAGTGGCATAAC i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4395013 209 + 32716333 GACTATAGAATTAGCAACAGGAAGGCA-TTTTAATTAAGGTTACACTCATTTCATATTATATTTTCTCATCTGTTATTGTTATGAGGCATATGTGCTCCTGGCAACATGATGAAGAGAATCTCTCTGAATATTGATCTTTCTTCCTGAGGGAAAATGC------TCATGATTTCTATGGCGGGACTAGTG---GGGGCCATGGAGTGAAGTGGCATAAC i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168510182 209 - 198365852 GACTATAGAATTAGCAACAGGATGGCA-TTTTAATTAAGGTTACACTCATTTTATATTATATTTTCTAATCTGTTATTGTTATGACGCATATGTGCTTCTGGCAACATGATGAAGAGGATCTCTCTGAATATTCATCTTTCCTCCTGAGTGAAAATGC------TCATGATTTCTATGGCAGGACTAGTG---GGGGCCATGGAGTGAAGTGGCATAAC i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162173054 209 - 192294377 GACTATAGAATTAGCAACAGGATGGCA-TTTTAATTAAGGTTACACTCATTTTATATTATATTTTCTAATCTGTTATTGTTATGACGCATATGTGCTTCTGGCAACATGATGAAGAGAATCTCTCTGAATATTCATCTTTCCTCCTGAGTGAAAATGC------TCATGATTTCTATGGCAGGACTAGTG---GGGGCCATGGAGTGAAGTGGCATAAC i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150857489 209 - 180432695 gacTATAGAATTAGCAACAGGATGGCA-TTTTAATTAAGGTTACactcattttatattatattttctaatctgTTATTGTTATGAGGCATATGTGCTTCTGGCAACATGATGAAGAGAATCTCTCTGAATATTCATCTTTCCTCCTGAGTGAAAATGC------TCATGATTTCTATGGCAGGACTAGTG---GGGGCCATGGAGTGAAGTGGTATAAC i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14958508 209 - 90373283 GACTATAGAATTAGCAACAGGATGGCA-TTTTAATTAAGGTTACACTCATTTTATATTATATTTTCTAATCTGTTATTGTTATGAGGCATATGTGCTTCTGGCAACATGATGAAGAGAATCTCTCTGAATATTCATCTTTCCTCCTGAGTGAAAATGC------TCATGATTTCTATGGCAGGACTAGTG---GAGGCCACGGAGTGAAGTGGCATAAC i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21885417 209 + 50472720 GACTATAGAATTAGCAACAGGAAGGCATTTTTAATTAAGGTTACACTCATTTCATATTATATTTTATAATCTTTTATTGTTATGAGGATCATGTGCTCCTGGCAACATGATGAAGAGAAGCTCTCTGAATATTGATCTTTCTTCCTGAGGGAAAATGC------TCATGATTCCAAT-GTGAGACTAGAG---GGGGCCATGGAGTGAAGTGGCATAAT i calJac3.chr21 C 0 C 0 s mm10.chr16 78093181 207 + 98207768 GACTATAGCATAAGCACAGGGAGATCA-TTTTAATTAAGGCTACATTCATTTTACATTATACCTTCTAATGCTTTATTGGCGTGAGGAGTTTGTACCCCTG---ACATATTAAGGAGACCCTTTCTGCCTGGGGATCATTTCTCCTGCAGGAAACTAT------TGGGAGTGACTGCTGACAGACTCATGTTCGGGGC--TCAGATGAAGGGGCTCAGC i mm10.chr16 I 9 I 3140 s canFam3.chr31 13783244 214 + 39895921 AACTATAGAATTAACAACAGGAAAGGA-TTTTAATTAAGGTTACACTCATTTTACATTCTATTTTCTAATGCTTTATTGTTATGAGGAATGTGTGCTCCTGGCAACATGTTGAAGACAGCCTCTCTAAATTGTGATCCTTCTTCCTCAGGGAAAATGCCACTGTTCCTGATTACTGTGGAGGGACCAGT----GGGGCCACGGAGAAAAGAGGCATAAC i canFam3.chr31 C 0 C 0 a score=22629.000000 s hg38.chr21_KI270874v1_alt 22401 9 + 166743 GAAGAGTT---A s panTro4.chr21 3635122 9 + 32799110 GAAGAGTT---A i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16882212 12 + 48394510 GAAGAGTTAGAA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4395222 12 + 32716333 GAAGAGTTAGAA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168510391 12 - 198365852 CAAGAGTTGGAA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162173263 12 - 192294377 CAAGAGTTGGAA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150857698 12 - 180432695 CAAGAGTTGGAA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14958717 12 - 90373283 CAAGAGTTGGAA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21885626 12 + 50472720 CAAGAATTAGAA i calJac3.chr21 C 0 C 0 s canFam3.chr31 13783458 9 + 39895921 AAAGAGTTA--- i canFam3.chr31 C 0 I 1324 e mm10.chr16 78093388 3140 + 98207768 I a score=1268849.000000 s hg38.chr21_KI270874v1_alt 22410 374 + 166743 GAACCGTATACAGAAAAAAAATTACAACTTTCATAGCAGATAAGACATCTAAAGCCTAGTGACAGTAAACAACATATTCAAGATCACCCAATATTAGTAATTAAGTCAGCAACAATGACAAGACGGGAACTTGAAAGAAAATTTATCATG--ACATAACTCACACACCTCTTAACTGAAGT-GGCCTTATaaaggattagagctaaatagccacctgttgtttgagcagtgagttaaaggagagcagtactttgctgaaacaatggcttaaggaagcagtgatgt------acatcttcaaataacatgctgtggctgtgtctggcaggga-aacaagcgaatgataggctggcttgcacactacattcaaggatgagtggatc s panTro4.chr21 3635131 374 + 32799110 GAACCGTATACAGAAAAAAAATTACAACTTTCATAGCAGATAAGACATCTAAAGCCTAGTGACAGTAAACAACATATTCAAGATCACCCAATATTAGTAATTAAGTCAGCAACAATGACAAGACAGGAACTTGAAAGAAAATTTATCATG--ACATAACTCACACACCTCTTAACTGAAGT-GGCCTTATAAAGGATTAGAGCTAAATAGCCACCTGTTGTTTGAGCAGTGAGTGAAAGGAGAGCAGTACTTTgctgaaacaatggcttaaggaagcagtgatgt------acatcttcaaataacatgctgtggctgtgtctggcaggga-aacaagcgaatgataggctggcttgcaCACTACATTCAAGGATGAGTGGATC i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16882224 374 + 48394510 GAACCGTATACAGAAAAAAAATTACAACTTTCATAGCAGATAAGACATCTAAAGCCTAGTGACAGTAAACAACATATTCAAGATCACCCAATATTAGTAATTAAGTCAGCAACAATGACAAGACAGGAACTTGAAAGAAAATTTATCATG--ACATAACTCACATACCTCTTAACTGAAGT-GGCCTTATAAAGGATTAGAGCCAAATAGCCACCTGTTGTTTGAGCAGTGAGTTAAAGGAGAGCAGTACTTTGCTGAAACAATGGCTTAAGGAAGCAGTGATGT------ACATCTTCAAGTAACATGCTGTGGCTGTGTCTGGCAGGGA-AACAAGTGAATGATAGGCTGGCTTGAACACTACATTCAAGGATGAGTGGATC i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4395234 373 + 32716333 GAACCGTATACAGAAAAAAAATTACAACTTTCATAGCAGATAAGACATCTAAAGCCTAGTGACAGTAAACAACATATTCAAGATCACCCAATATTAGTAATTAAGTCAGCAAC-ATGACAAGACAGGAACTTTAAAGAAAATTTATCATG--ACATAACTCACATACCTCTTAACTGAAGT-GGCCTTATAAAGGATTAGAGCCAAATAGCCACCTGTTGTTTGAGCAGTGAGTTAAAGGAGAGCAGTACTTTGCTGAAACAATGACTTAAGGAAGCAGTGATGT------ACATCTTCAAATAACATGCTGTGGCTGTGTCCGGCACGGA-AACAAGCGAATGATAGGCTGGCTTGCACACTACATTCAAGGATGAGTGGATC i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168510403 374 - 198365852 GAACCACACACAGAAAAAAAATTCCAACTTTCATAGCAGATAAGACATCTAAAGCCTAGTGACAGTAAACAACATATTCAAGATCACCCAATATTACTAATTAAGTCAGCAACAATGACAAGACAAGACCTTAAAAGAAAATTTATCATG--ACATAATTCACACACCTCTTAACTGAAGT-GGCCTTATAAAGGATTAGAACCGAATAGCCACATGTTGTTTGAATAGTGAGTTAAAAGAGAGCAGTACTTTgctgaaacaatggcttaaggaagcagtgaggc------acatcttcaaacaacatgctgtggctgtgactggcaggga-aacaagtgactgatagactggcttgcacactacattcaaagatgagtggatc i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162173275 374 - 192294377 GAACCACACACAGAAAAAAAATTCCAACTTTCATAGCAGATAAGACATCTAAAGCCTAGTGACAGTAAACAACATATTCAAGATCCCCCAATATTACTAATTAAGTCAGCAACAATGACAAGACAAGACCTTAAAAGAAAATTTATCATG--ACATAATTCACACACCTCTTAACTGAAGT-GGCCTTATAAAGGATTAGAACCGAATAGCCACATGTTGTTTGAATAGTGAGTTAAAAGACAGCAGTACTTTgctgaaacaatggcttaaggaagcagtgaggc------acatcttcaaacaacatgctgtggctgtgactggcaggga-aacaagtgactgatagactggcttgcacactacattcaaagatgagtggatc i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150857710 374 - 180432695 GaaccacacacagaaaaaaaattccaactttcATAGCAGATAAGACATCTAAAGCCTAGTGACAGTAAACAACATATTCAAGATCACCCAATATTACTAATTAAGTCAGCAACAATGACAAGACAAGaccttaaaagaaaatttatcatG--ACATAATTCACACACCTCTTAACTGAAGT-GGCCTTATAAAGGATTAGAACCGAATAGCCACATGTTGTTTGAATAGTGAGTTAAAAGAGAGCAGTACTTTGCTGAAACAATGGCTTAAGGAAGCAGTGAGGC------ACATCTTCAAACAACATGCTGTGGCTGTGACTGGCAGGGA-AACAAGTGACTGATAGACTGGCTTGCACACTACATTCAAAGATGAGTGGATC i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14958729 372 - 90373283 GAACCACACACAGAAAAAAAATTCCAATTTTCATAGCAGATAAGACATCTAAAGCCTAGTGACAGTAAACAACATATTCAAGATCACCCAATATTACTAATTAAGTCAGCAACAATGACAAGACAAGACCTTAAAAGAAAATTTATCATG--ACATAATTCACACACCTCTTAACTGAAGT-GGCCTTATaaaggattagaaccgaatagccacatgttgttcgaatagtgagttaaaagagagcagtactttgctgaaacaatggcttaaggaagcagtgaggc------acatcttcaaacaacatgctgtggctgtgactggcaggga-cacaagtgactgat--actggcttgcacactacattcaaagatgagtggatc i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21885638 374 + 50472720 GAACCATATACAGAAAAAAATTTACAACTTTCATAGCAGGTAAGACATATAAAGCCTAGTGAGAGTAAACAACATATTCAAGATCACCCAGTTTTACTAATTAAGTCAGCAACAATGCCAAGACAGGATCTTGAAAGAAATTTTTTTGT---ACGTAACTCACATACCTCTTAACTGAAGA-GGCCTTATAAAAGATTAGAGCCAAATAGCCACATGTTGCTtgagcagtgagttaattgagaacagtattttgctgaaacaatggcttaaggaagcagtgatgc------acatcttcagataacattttgtgactgtgcctggcagggagaacaagtgactgataggctggcttacacactacattcaaggatgagtggatc i calJac3.chr21 C 0 C 0 s canFam3.chr31 26111960 371 - 39895921 gaaccagaCACAGCAAAAA--TTACAACTTTAATAGCAGATAAGAGATCTAAA-CCTAGTCAGGGTAAACAATATATTCAGTATCATCCAACTATATTAATTATTTCAGCAACAATGACAAGATTGGATATTGAATTAAAATTTATCATGGTGCACAACTCATGTATTTCTTGACTGAAATGGGTCTGATAAAGAATCAG--------GGTTATATGCTTCTTAAGtggtaagctgaaggagaataatagcaacccaaaacagtagttcaaggatgcagtgatactcagtaacatagccagataacatgttataactgtggcttgctggga-aacaagtagcagataggctag-ttgtacacagtacccaaagatgagtagata i canFam3.chr31 n 1324 C 0 e mm10.chr16 78093388 3140 + 98207768 I a score=700.000000 s hg38.chr21_KI270874v1_alt 22784 1 + 166743 t s panTro4.chr21 3635505 1 + 32799110 t i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16882598 1 + 48394510 T i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4395607 1 + 32716333 T i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168510777 1 - 198365852 c i rheMac3.chr3 C 0 C 0 s chlSab2.chr2 14959101 1 - 90373283 c i chlSab2.chr2 C 0 C 0 s canFam3.chr31 26112331 1 - 39895921 t i canFam3.chr31 C 0 C 0 e calJac3.chr21 21886012 0 + 50472720 C e mm10.chr16 78093388 3140 + 98207768 I e macFas5.chr3 162173649 0 - 192294377 C e papAnu2.chr3 150858084 0 - 180432695 C a score=1602.000000 s hg38.chr21_KI270874v1_alt 22785 5 + 166743 ttctg s panTro4.chr21 3635506 3 + 32799110 ttc-- i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16882599 5 + 48394510 TTCTG i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4395608 5 + 32716333 TTCTG i nomLeu3.chr25 C 0 C 0 s canFam3.chr31 26112332 5 - 39895921 ttttg i canFam3.chr31 C 0 T 57565 e calJac3.chr21 21886012 0 + 50472720 C e mm10.chr16 78093388 3140 + 98207768 I e rheMac3.chr3 168510778 0 - 198365852 C e chlSab2.chr2 14959102 0 - 90373283 C e macFas5.chr3 162173649 0 - 192294377 C e papAnu2.chr3 150858084 0 - 180432695 C a score=159588.000000 s hg38.chr21_KI270874v1_alt 22790 315 + 166743 tttttg--------tttttgtttttttgagatggagtctcgctctgtcgcccaggctggagtgcagtggcacaatttctgctcactgcaagctctgcctcccgggttcacgccattctcccgcctcagcctcccgagtagctgggactacaggcgcccgccaccacgcccggctaattttttgtatttttagtagagacagggtttcatcatgttagccaggatggtctcgatctcctaacctcatgatctgcccgcctcggcctcccaaagtactgggattacaggcgtgagccaccgcaccaggccggatgagttgaaagt s panTro4.chr21 3635509 311 + 32799110 ----tg--------tttttgtttttttgagacagagtctcgctctgtcgcccaggctggagtgcagtggcacaatttctgctcactgcaagctccgcctcccgggttcacgccattctcccgcctcagcctcccgagtagctgggactacaggcgcccgccaccacacccggctaattttttgtatttttagtagagacagggtttcatcatgttagccaggatggtctcgatctcctaacctcatgatccgcccgcctcggcctcccaaagtactgggattacaggcgtgagccaccgcaccgggccGGATGAGTTGAAAGC i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16882604 323 + 48394510 tttttgttttcgtttttttgtttttttgagatgaagccttgctctgtcgcccaggctggagtgtggtggcacaatttctgctcactgcaagctctgcctcctggattcacaccattctcccacctcagcctcctgagtagctgggactacaggtgcccgccaccacgcctggctaattttttgtatttttagtagagatggggtttcaccgtgttagccaggatggtctcgatctcctgacttcgtgatccgcctgcctcggcctcccaaaatgctgggattacagtcatgagccactgcgccaggccGAATGAGTTGAAAGC i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4395613 323 + 32716333 tttttgtttttgttttcttgtttttttgagatggagtcttgctctgtcgcccaggctagagtgcggtggcacaatttctgctcactgcaagctccacctcctgggttcatgccattctcctgcctcagcctcccaagtagctgggactacaggtgcccgccaccacacccggctaattttttgtatttttagtagagatggggtttcaccatgttagccaggatggtctcgatctcctaaccttgtgatccgcccgcctcggcttcccaaagtgctgggattacaggcgtgagccaccgcgccgggccAGATGAGTTGAAAGC i nomLeu3.chr25 C 0 C 0 e calJac3.chr21 21886012 0 + 50472720 C e canFam3.chr31 26112337 57565 - 39895921 T e mm10.chr16 78093388 3140 + 98207768 I e rheMac3.chr3 168510778 0 - 198365852 C e chlSab2.chr2 14959102 0 - 90373283 C e macFas5.chr3 162173649 0 - 192294377 C e papAnu2.chr3 150858084 0 - 180432695 C a score=700.000000 s hg38.chr21_KI270874v1_alt 23105 1 + 166743 t s panTro4.chr21 3635820 1 + 32799110 T i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16882927 1 + 48394510 T i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4395936 1 + 32716333 T i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162173649 1 - 192294377 c i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150858084 1 - 180432695 C i papAnu2.chr3 C 0 C 0 s calJac3.chr21 21886012 1 + 50472720 t i calJac3.chr21 C 0 C 0 e canFam3.chr31 26112337 57565 - 39895921 T e mm10.chr16 78093388 3140 + 98207768 I e rheMac3.chr3 168510778 0 - 198365852 C e chlSab2.chr2 14959102 0 - 90373283 C a score=746963.000000 s hg38.chr21_KI270874v1_alt 23106 267 + 166743 ttctaagcaaagctttcaactatccacagcaactaaacagagaagtcaagacacaaccacgcactacaaaaagccaatatcgttgaccatcatgaaatcattgttatatgagtaccaaatatggaaagactctagggcgtgcTTTCTactttcttgctcctttagatgaggtgtgaccatgtgactggcattcaccaagaaatacaaatagaagtggcatgaaatactttggggcagaaattttaagtgtcagtatgcagtttgcAT s panTro4.chr21 3635821 267 + 32799110 TTCTAAGCAAAGCTTTCAACTATCCACAGCACCTAAACAGAGAAGTCAAGACACAACCACGCACTACAAAAAGCCAATATCGTTGACCATCATGAAATCATTGTTATATGAGTACCTAATATGGAAAGACTCTAGGGCATGCTTTCTactttcttgctcctttagatgaggtgtgaccatgtgactggcattcaccaagaaatacaaatagaagtggcatgaaatactttggggcagaaattttaagtgtcagtatgcagtttgcAT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16882928 267 + 48394510 TTCTAAGCAAAGCTTTCAACTATCCACAGGACCTAAACAGAGAAGTCAAGACACAACCACGCACTACAAAAAGCCAATATCGTTGACCATCATGAAATCATTGTTATATGAGAACCAAATATGGAAAGACTCTAGGGCATGCTTTCTGcttccttgatcctatagatgaggtgtgaccgtgtgactggcattcaccaagaaatacaaatagaagtggcatgaaatactttggggcagaaattttaagtgttagtaggcagtttgcAT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4395937 267 + 32716333 TTCTAAGCAAAGCTTTCAACTCTCCACAGTACCTAAAGAGAGAAGTCAAGACACAACCACGCACTACCAAAAGCCAATATCGTTGACCATCATGAAATCATTGTTATATGAGTACCAAATATGGAAAGATTCTAGGGCATGCTTTCTGCTTTCTTGCACCTTTAGATGAGGTATGACCGTGTGGCTGGCATTCACCAAGAAATACAAATAGAAGTGGCATGAAATACTTTGGGGCAGAAATTTTAAGTGTCAGTAGGCAGTTTGCAT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168510778 265 - 198365852 ttctaaacaaagctttcaactgTCCATAGTACCCAAAGAGAGAAGTCAAGACACAA-CACGCACTACAAAAAGCCCACATCACTGACCATCAGGAAATCATTGTTATCTGAGTACCAAATAAGGAAAGACTCTAAGGCATGCTTTCTactttcttgctcctttagatgaggtgtgaccgtgtgactggcattcaccaag-aatacaaatagaagtggcatgagatactttggggtggaaattttaagtgtgagtaggcagtttgcAT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162173650 265 - 192294377 ttctaaacaaagctttcaactgtccatagtacccaaagagagaagtcaagacacaa-cacgcactacaaaaagcCCACATCACTGACCATCAGGAAATCATTGTTATCTGAGTACCAAATAAGGAAAGACTCTAAGGCATGCTTTCTACTTTCTTGCTCCTTTAGATGAGGTGTGACCGTGTGACTGGCATTCACCAAG-AATACAAATAGAAGTGGCATGAGATACTTTGGGGTGGAAATTTTAAGTGTGAGTAGGCAGTTTGCAT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150858085 265 - 180432695 TTCTAAACAAAGCTTTCAACTGTCCATAGTACCCAAAGAGAGAAGTCAAGACACAA-CACGCACTACAAAAAGCCCACATCACTGACCATCAGGAAATCATTGTTATCTGAGTACCAAATAAGGAAAGACTCTAAGGCATGCTTTCTACTTTCTTGCTCCTTTAGATGAGGTGTGACCGTGTGACTGGCATTCACCAAG-AATACAAATAGAAGTGGCATGAAATACTTTGGGGTGGAAATTTTAAGTGTGAGTAGGCAGTTTGCAT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14959102 265 - 90373283 ttctaaacaaagctttcaactgtccacagtacccaaagagagaagtcaagacacaa-cacgcactacaaaaagcCCACATCACTGACCATTAGGAAATCATTGTTATCTGAGTACCAAATAAGGAAAGACTCTAAGGCATGCTTTCTactttcttgctcctttagatgaggtgtgaccatgtgactggcattcaccaag-aatacaaatagaagtggcacgaaatactttggggtggaaattttaagtgtgagtaggcagtttgcAT i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21886013 260 + 50472720 ttctaagcaaagcttccaactgTCCACAGTATCCAAAGACAGAAACCAAGACATAA-CACACA--GCATAAAGCCAATAGAGTGGACCATCATGAA---ATTATTATATGAGTAGCAAATATGGAAAAATTCTAAGGCATGCTTTCTACTGACTCGCTCCTTTATATGAGGTATGACCATGTGACTGGCACTTATCAAGAAACACAAATAGAAG-GGTATGAAATACTTTGGGACAGAAATTTTAACTGTCACAGGGCAGTGTGCAT i calJac3.chr21 C 0 C 0 e canFam3.chr31 26112337 57565 - 39895921 T e mm10.chr16 78093388 3140 + 98207768 I a score=1170738.000000 s hg38.chr21_KI270874v1_alt 23373 361 + 166743 AAGAGAATGAATTCACTTTGATAATGCATA---AAAATAGCAAGAATTCTAGCAACCCGAGAGGAAAAGTCAATGATCTCTAACTATT-----GAGTGATAAAAGCTGTACTTGATGCAAGCCTATTAATAGAGGGTGAGAATTAGAAGACAGGTACACAAATATGACATCGAACTACAGAAGGCAGTGGGACAAGAACACTATAGAATGAAAAAGTGAATCAG--GAGAACAAAGGGAACAGGTATTCAAACAAAACCAGATTCAAAGTTTGAGAAAA----TTGTGTCTCTTTATAAGATGAAATACAAATTTTATTAGAGCTCCA--AGAT-TATTAATTATACTTGTTTACAATTAGGC-----TTCATCACATAATGT s panTro4.chr21 3636088 361 + 32799110 AAGAGAATAAATTCACTTTGATAATGCATA---AAAACAGCAAGAATTCTAGCAACCCGAGAGGAAAAGTCAATGATCTCTAACTATT-----GAGTGATAAAGGCTGTACTTGGTGCAAGCCTATTAATAGAGGGTGAGAATTAGAAGACAGGTACACAAATATGACATCGAACTACAGAAGGCAGTGGGACAAGAACACTATAGAATGAAAAAGTGAATCAG--GAGAACAAAGGGAACAGGTATTCAAACAAAATCAGATTCAAAGTTTGAGAAAA----TTGTGTCTCTTTATAAGATGAAATACAAATTTTATTAGAGCTCCA--AGAT-TATTAATTATACTTGTTTACAATTAGGC-----TTCATCACATAATGT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16883195 366 + 48394510 AAGAGAATAAATTCACTTTGATAATGCATA---AAAACAGCAAGAATTCTAGCAACCTGAGAGGAAAAGTCAATCCTCTCTAACTATT-----GAGTGATAAAGGCTGTACTTGGAGCAAGCCTATTAACAGAGGGTGAGAATTAGAAGATGGGTACACAAATATGACATCAAACTACAGAAGGCAGTGGGACAAGAACACTTTAGAATGAAAAAGTGAATCAG--GAGAACAAAGGGAACAGGTATTCAAACAAAACCAGATTCAAAGTTTGAGAAAA----TTGTGTCTCTTTATAAGATGAAATAAAAATTTTATTAGAACTCCA--AGAT-TATTAATTATACTTGTTTACAATTAGGCTTCATTTCATCACATAATGT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4396204 366 + 32716333 AAAAGAATAAATTCACTTTGATAATGCATA---AAAACAGCAAGAATTCTAGCAACCTGAGAGGAAAAGTCAATCATCTCTAACTATT-----GAGTGATAAAGGCTGTACTTGGAGCAAGCCTATTAATAGAGGGTGAGAATTAGAAGACAGGTGCACAAATATGACACCGAACTACAGAAGGCAGTGGGACAAGAACACTTTAGAATGAAAAAGTGAATCAG--GAGAACAAAGGGAACAGGTATTCAAACAAAACCAGATTCAAAGTTTGAGAAAA----TTGTGTCTCTTTATAACATGAAATAAAAATTTTATTAGAACTCCA--AGAT-TATTAATTATACTTGTTTACAATTAGGCTTTATTTCATCACATAATGC i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168511043 374 - 198365852 AAGAGAATAAATTCAGTTTGATAATGCATA---AAAACAGCAAGAATTCTAGCAACCTGAGAGGAAAAGTCAATCATCTCTAACTATT-----GAGTGATAAAGGCTGTACTTTGAGTAAGACTATTAATAGCGGGTGAGAAGTAGAAGCCAGGTACACAAACATGACATCAAACTACAGAAGGCAGTGGGACAAGAATACTTCACAATGAAAAGGTGAATCAGGAGAGAACAAAGGGAACAGGTATTCAAACAAAACCAGATTCAAAATTTGAGAAAATAGTTTGTGTCCCTCTACACGATAAAATAAAAATTTTATTAGAACTTTATTAGCT-TATTAATTATACTTGCCTACAATTAGGCTTCATTTCATCACATAATGT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162173915 374 - 192294377 AAGAGAATAAATTCAGTTTGATAATGCATA---AAAACAGCAAGAATTCTAGCAACCTGAGAGGAAAAGTCAATCATCTCTAACTATT-----GAGTGATAAAGGCTGTACTTTGAGTAAGACTATTAATAGCGGGTGAGAAGTAGAAGCCAGGTACACAAACATGACATCAAACTACAGAAGGCAGTGGGACAAGAATACTTCACAATGAAAAGGTGAATCAGGAGAGAACAAAGGGAACAGGTATTCAAACAAAACCAGATTCAAAATTTGAGAAAATAGTTTGTGTCCCTCTACACGATAAAATAAAAATTTTATTAGAACTTTATTAGCT-TATTAATTATACTTGCCTACAATTAGGCTTCATTTCATCACATAATGT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150858350 374 - 180432695 AAGAGAATAAATTCAGTTTGATAATGCATA---AAAACAGCAAGAATTCTAGCAACCTGAGAGGAAAAGTCAACCATCTCTAACTATT-----GAGTGATAAAGGCTGTACTTTGAGTAAGACTATTAATAGAGGGTGAGAAGTAGAAGCCAGGTACACAAACATGACATCGAACTACAGAAGGCAGTGGGACAAGAATACTTCACAATGAAAAGGTGAATCAGGAGAGAACAAAGGGAACAGGTATTCAAACAAAACCAGAttcaaaatttgagaaaatagtTTGTGTCTCTCTACacgataaaataaaaattttattagaactTTATTAGCT-TATTAATTATACTTGCCTACAATTAGGCTTCATTTCATCACATAAtgt i papAnu2.chr3 C 0 I 321 s chlSab2.chr2 14959367 374 - 90373283 AAGAGAATAAATTCAGTTTGATAATGCATA---AAAACAGCAAGAATTCTAGCAACCTGAGAGGAAAAGTCAATCATCTCTAACTACT-----GAGTGATAAAGGCTGTACTTTGAGTAAGACTATTAATAGAGGGTGAGAAGTAGAAGCCAGGTACACAAACATGACATCGAACTACAGAAGGCAGTGGGACAAGAACACTTCACAATGAAAAGGTGAATCAGAAGAGAACAAAGGGAACAGGTATTCAAACAAAACCAGATTCAAAATTTGAGAAAATAGTTTGTGTCTCTTTACACGATAAAATAAAAATTTTATTAGAACTTTATTAGCG-TATTAATTATACTTGCCTACAATTAGGCTTCATTTCATCACATAATGT i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21886273 364 + 50472720 AAGAGAATAAAT--ACTTTGATAATGCATA---AAAACAGCAAGAATTCTAGCAACCTAAGAGAAAAAGTCAATCATCTCTAACTATT-----GAGTGATAAAGTCTGTAATTTGAGCAAGCCTACTAACAGAGGGTGAGAATTAGAAGCCAAGTACACAAATAAGACATTGAACTTTGAAAGGCAGTGGGACAAGAACACTTTAGAATGAAAAAGTGAATCAG--GAAAACAAAGGGAACAGGTATTCAAACAAAACCAGATTCAAACTCTGAGAAAATAATTTGTG----TTTATGAGATGAAATAAAAATTTTATTAGAGCTCCA--AGAT-TATTAATTTTACTTGTTTACATTTAGGCATCATTTTATCACATAATGT i calJac3.chr21 C 0 C 0 s canFam3.chr31 13784791 363 + 39895921 AAGAGAGGAAATTCACTTTGAAAATATATATACTAAGAAATGAGAATTCTAGCAATATTAGAGAAGAAAGCACTCATCTCTAACAATTCACAAAAGTGATAAAAGGTGCACTCTGAGTACATCCATT-GTAGAGGCTGAAAATTAGAGCCCAGGTAAAAAATTGTGACATCACAGTATAGCAGGGAGTAGAAAAAAAACAGTTTAGAAGCTAA-----AATCAA--GAGAACAAAA-----ATGTATTTAAACAAGACCAGAATCAAATTTT-AGAAAATGGTTTTTATGTCTCT-TAAAATAAATTAGAAGTTTTATCAGAACCCTA--AGATATACTAATTATA---GTTCACCATTAGGCTTCATTCTATCACATAATAC i canFam3.chr31 I 1324 C 0 e mm10.chr16 78093388 3140 + 98207768 I a score=189354.000000 s hg38.chr21_KI270874v1_alt 23734 68 + 166743 AGGATTTCCTTT-------TTAAAAAttatttgtagaaatttatagggtacaagtgcaattttcttacatgggta s panTro4.chr21 3636449 68 + 32799110 AGGATTTCCTTT-------TTAAAAAttatttgtagaaatttatagggtacaagtgcaattttcttacatgggta i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16883561 68 + 48394510 AGGATTTCCTTT-------TTAAAAAttatttgtagaaatttatggggtacaagtgaaattttcttacatgggta i ponAbe2.chr21 C 0 I 1012 s nomLeu3.chr25 4396570 68 + 32716333 AGGATTTCCTTT-------TTAAAAAttatttgtagaaatttctggggtacaagtgcaattttcttacatgagta i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168511417 68 - 198365852 AGGATTTCCTTT-------TTAAAAAttatttgtataaatcaatggggtacaagtgcaattttcttacatgtgta i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162174289 68 - 192294377 AGGATTTCCTTT-------TTAAAAAttatttgtataaatcaatggggtacaagtgcaattttcttacatgtgta i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150859045 68 - 180432695 aggatttccttt-------ttaaaaattatttgtataaatcaatggggtacaagtgcaattttctTACATGTGta i papAnu2.chr3 I 321 C 0 s chlSab2.chr2 14959741 68 - 90373283 AGGATTTCCTTT-------TTTAAAAttatttgtataaatcaatggggtacaagtgcaattttcttacatgtgta i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21886637 68 + 50472720 AGGAtttccttt-------tttaaaagtatttatataaatttatggggtccaagtgcaattttcttatctgtgta i calJac3.chr21 C 0 C 0 s canFam3.chr31 13785154 41 + 39895921 AGAACTTCTTTTGCCATCCTGAAAAAGT-----CACAAATTAAGGA----------------------------- i canFam3.chr31 C 0 C 0 e mm10.chr16 78093388 3140 + 98207768 I a score=312177.000000 s hg38.chr21_KI270874v1_alt 23802 145 + 166743 gattatgtagtggtgaagttagagcttttactgtatccatcacccaaatagtgtacattgtatccattaagtaatctctcatcatccaccctcctttcatcccttcgcctttccaagtatccattgtctatcatccATCACATCA s panTro4.chr21 3636517 145 + 32799110 gatcatgtagtggtgaagttagagcttttactgtatccatcacccaaatagtgtacattgtatccattaagtaatctctcatcatccaccctcctttcatcccctcgcctttccaagtatccattgtctatcatccATCACATCA i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4396638 145 + 32716333 gattgtgtagtggtgaagttagagcttttagtgtatgcatcacccaaataatatacattgtatccattaagtaatctctcatcatccaccctcctttcatcccctcacctttccaagtatccattgtctatcatccATCACATCA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168511485 145 - 198365852 gattgtgtagtggtgaagttagagcttttagtgtatccatcacccaaataatgtacattgtatccattaagcaatttctcatcatccaccctcatttcatcccctcacccttccaagtatccattgtctatcatccATCACATCA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162174357 145 - 192294377 gattgtgtagtggtgaagttagagcttttagtgtatccatcacccaaataatgtacattgtatccattaagcaatttctcatcaaccaccctcatttcatcccctcacccttccaagtatccattgtctatcatccATCACATCA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150859113 145 - 180432695 gattgtgtagtggtgaagttagagcttttagtgtatccatcacccaaataaggTACATTGCATCCATTAAGcaatttctcatcatccacccTCATTTCATCCCCTCACCCTTCCAAGTATCCATTGTCTATCATCCATCACATCA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14959809 145 - 90373283 gattgtgtagtgatgaagttagagcttttagtgtatccgtcacccaaataatgtacattgtatccattaagtaatttctcatcatccaccctcatttcatcccctcacccttccaagtatccattgtctatcatccATCACATCA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21886705 144 + 50472720 gattgtgtagtggtgaa-ttaaagattttagtatatccatcacccaaataaagtacgttgtatccatgaagtaatttctcatcatccaccctccttttatccccttaaccttccaagtctccattatctatcatccatcccatcA i calJac3.chr21 C 0 I 319 s canFam3.chr31 13785195 18 + 39895921 GACCTTGTAGT-------------------------------------------------------TTAAGTA------------------------------------------------------------------------ i canFam3.chr31 C 0 C 0 e mm10.chr16 78093388 3140 + 98207768 I e ponAbe2.chr21 16883629 1012 + 48394510 I a score=423158.000000 s hg38.chr21_KI270874v1_alt 23947 209 + 166743 CACAATGTAGGATTTCTCTTGCTACCGTTAAAGTCCACTCCAGAGCAAGACCCTGACAC-Taaaaaaaaaaaaagtcagaaaagaaataaaaaag------------------------------aaaa-------GTTACAAATATTTATCCACTTTCCAATGGCT-GTTCAAAGTTATACTGCCCAGAGTAAGCAAACC--AGAAAAACAGCATCAGGTATATGGTGTTGCTCTGCCCAAATTTGTTT s panTro4.chr21 3636662 209 + 32799110 CACAATGTAGGATTTCTCTTGCTACCATTAAAGTCCACTCCAGAGCAAGACCCTGACAC-Taaaaaaaaaaaaagtcagaaaagaaataaaaaag------------------------------aaaa-------GTTACAAATATTTATCCACTTTCCAACTGCT-GTTCAAAGTTATACCGCCCAGAGTAAGCAAACC--AGAAAAACAGCATCATGTATATGGTGTTGCTCTGCCCAAATTTGTTT i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4396783 208 + 32716333 CATAATGTTGGATTTCTTTTGCTACCGTTAAAGTCCACTCCAGAGCAAGACCCTGACGC-Taaaaaaaaagaaattcagaaaagaaataaaaaag------------------------------aaaa-------gTTACGAATATTTATACACTTTCTAACTGTT-GTTC-AAGTTATACTGCCCAGAGTAAGCAAACC--AGAAAAACAGCATCAGGTATACGGTGTTGCTCTGCCCAAATTTGTTT i nomLeu3.chr25 C 0 I 1015 s rheMac3.chr3 168511630 225 - 198365852 CATAATGCAGGATTTCTTTTGCCACCCTTAAAGTCCACTCCAGAGGAAGACCCTGACACaaaaaaaaaaaaaaaaaaagaaaagaaaaaaaaaaGTCAGA---------------AAAGAAATTAAAAA-------GTTACAAATATTTATACACTTTCTAATTGTT-ATTCAAAGTTATACTCCCCAGAGTAAGCAAACC--AGAAAAACAGCATCAAGTATATGGTGTTGTTCTGCCCAATTTAGTTT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162174502 223 - 192294377 CATAATGCAGGATTTCTTTTGCCACCCTTAAAGTCCACTCCAGAGCAAGACCCTGACAC--aaaaaaaaaaaaaaaaagaaaagaaaaaaaaaagtcaga---------------aaagaaattaaaaa-------GTTACAAATATTTATACACTTTCTAATTGTT-ATTCAAAGTTATACTCCCCAGAGTAAGCAAACC--AGAAAAACAGCATCAAGTATATGGTGTTGTTCTGCCCAATTTAGTTT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150859258 215 - 180432695 CATAATGCAGGATTTCTTTTGCCACCATTAAAGTCcactccagagcaagaccctgacac----------aaaaaaaaaaaaaagaaaaaaaaaagtcaga---------------aaagaaattaaaaa-------gttacaaatattTATACACTTTCTAACTGTT-ATTCAAAGTTATACTCCCCAGAGTAAGCAAACC--AGAAAAACAGCATCAAGTATATGGTGTTGTTCTGCCCAATTTAGTTT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14959954 224 - 90373283 CATAATGCAGAATTTCTTTTGCCACCATTAAAGTCCACTCCAGAGCAAGACTCTGACAC-ACAAaaaaaagaaaaaggaaaaaagagaaaaaaagtcaga---------------aaagaaatttaaaa-------attacaaatATTTATACACTTTCTAACTGTT-ATTCAAAGTTATACTCCCCAGAGTAAGCAAACC--AGAAAAACAGCATCAAGTATATGGTGTTGTTCTGCCCAATTTAGTTT i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21887168 242 + 50472720 cATAATGTAGGATTTCTTTTGCCACCATTAAAGTCCACTCCAGAGCAAGACCCTGACga-gagagagagagagagagagagagagagagagagagagagagagagagagagagagagagaaaggagagagagaTTGGTTACAAATATTTATATACTTTC----TGTT-ATTCCAAATTATACTGCCCAGAGTAAGCAAAGC--AGAAAAACAGCATCAGGTATATGGTGTTACTGTGCCCAATTTTGTTT i calJac3.chr21 I 319 C 0 s canFam3.chr31 13785213 129 + 39895921 ---------------------CTATCGATAA---CCATCCTTGAACAGGATC--------------------------------------------------------------------------------------------TATGTACCTACCTTCTAATGGTTAAATCAAGGTTATACTGCCCAGAGTAAGCAAACCATAAAAAAACAGCACCAGGTAAACAG-----CTCTATCTGGTTTTATTT i canFam3.chr31 C 0 C 0 e mm10.chr16 78093388 3140 + 98207768 I e ponAbe2.chr21 16883629 1012 + 48394510 I a score=498653.000000 s hg38.chr21_KI270874v1_alt 24156 243 + 166743 CTGTTGGTGTGGTGCACCTCATGAAATAGATGGCCTCTAGAGCACTTGTCAGTTTTAG--------AACATGATGGATCTAGATTTCACTAATGAGGTATTCCAGAAGCTGAATATATCAGGAGTCTTATCTCACAGATATGTATATATTTATAATTGctttagtttgatctagtgcttactatcatgttggctactatgtactgtctgctagctttcAAGTTCTGTATTCACTTG-AAATGCCCATCTTAT------ s panTro4.chr21 3636871 243 + 32799110 CTGTTGGTGTGGTGCACCTCATGAAATAGATGGCCTCTAGAGCACTTGTCAGTTTTAG--------AACATGATGGATCTAGATTTCACTAATGAGGTATTCCAGAAGCTGAATATATCAGGAGTCTTATCTCACAGATATGTATATATTTATAATTGCTTTAGTTTGATCTAGTGCTTACTATCATGTTGGCTACTATGTACTGTCTGCTAGCTTTCAAGTTCTGTATTCACTTG-AAATGCCCATCTTAT------ i panTro4.chr21 C 0 C 0 s rheMac3.chr3 168511855 243 - 198365852 CTGTTGGTGTGGTACATCTCATGAAATAGATGGCCTCTAAAGTGCTTGTCAGTTTTAG--------AATATGACAAATCTAGATTTCACTAATGAAGTATTCCAGAAGCTGAATATACCAGGAGTCTCACCTCACAGATATGTATATATTTACAATTGCTTTAGTTTGATCTACTGCTTACTATCATGTTGGCTACTATGTACTCTCTGCTAGCTTTAAAGTTCTGTATTCACTTG-AAATGCCCGTCTTAT------ i rheMac3.chr3 C 0 I 1 s macFas5.chr3 162174725 243 - 192294377 CTGTTGGTGTGGTACATCTCATGAAATAGATGGCCTCTAAAGTGCTTGTCAGTTTTAG--------AATATGACAAATCTAGATTTCACTAATGAAGTATTCCAGAAGCTGAATATACCAGGAGTCTCACCTCACAGATATGTATATATTTACAATTGctttagtttgatctactgcttactatcatgttggctactatgtactctctgctagcttTAAAGTTCTGTATTCACTTG-AAATGGCCGTCTTAT------ i macFas5.chr3 C 0 I 1 s papAnu2.chr3 150859473 243 - 180432695 CTGTTGGTGTGGTACATCTCATGAAATAGATGGCCTCTAAAGTGCTTGTCAGTTTTAG--------AATATGATGAATCTAGATTTCAATAATGAAGTATTCCAGAAGCTGAATATACCAGGAGTCTCACCTCacagatatgtatatatttacaattgcttTAGTTTGATCTAGTGCTTACTATCATGTTGGCTACTATGTACTCTCTGCTAGCTTTAAAGTTCTGTATTCACTTG-AAATGCCCGTCTTAT------ i papAnu2.chr3 C 0 I 1 s chlSab2.chr2 14960178 243 - 90373283 CTGTTGGTGTGGTACATCTCATGAAATAGATGGCCTCTAAAGTGCTTGTCAGTTTTAG--------AATATGATGAATCTAGATTTCACTAACAAAGTATTCCAGAAGCTGAATATACCAGGAGTCTCACCTCACAGATATGTATATATTTACAATTGctttagtttgatctagtgcttactatcatgttggctactatgtactgtctgctagcttTAAAGTTCTGTATTCACTTG-AAATGCCTGTCTTAT------ i chlSab2.chr2 C 0 I 1 s calJac3.chr21 21887410 243 + 50472720 CTGTCGGTGTGGTGCATCTCATAAAATAGATGGCCTCTAACACACTTGTCAGTTTTAG--------AAAATGAAAAATCTAGATTTCATTAATGAAGTATTCCAGCAGCTGAATATATCAGGAGTCTTACCTCACAGATATGGATGTATTTACAATTGCTTTAGTTTGATCTAGTGCTTACTATCATGTTGGCTACCATGTATTGTCTGCTAGCTTAAACCCTCTATATTCACTTG-AAATGCCAGTCTTAT------ i calJac3.chr21 C 0 I 7 s canFam3.chr31 13785342 251 + 39895921 CTGCCTATACAGTACATGTCATGAAATCAATGGCCTCTAAAGCACTTGTCAAAGTGAGATGAATACAGTGAGATGAATCAAGATCCCACT-ATGAACTATTCCTGAAACAAGATATTTCAGGAGTCTTTCTTCACAGAT----ATATATTTACAATTGTTTTAGCTTGGTCTAGTGTCTAATGCCTTATTGG-TACTACATTCTGTCTGCTAGCCACAAAGCTC-GTATTCACTTGAAAATGCCAACCTTGTTATTAT i canFam3.chr31 C 0 C 0 e mm10.chr16 78093388 3140 + 98207768 I e ponAbe2.chr21 16883629 1012 + 48394510 I e nomLeu3.chr25 4396991 1015 + 32716333 I a score=156324.000000 s hg38.chr21_KI270874v1_alt 24399 66 + 166743 -----------AAAAGCAG----------TGGTATATTATGACATACAATGATTTTAGGAAACTCCACTGAAGAAAT----------------AAATTTAGAA s panTro4.chr21 3637114 66 + 32799110 -----------AAAAGCAG----------TGGTATATTATGACATACAATGATTTTAGGAAACTCCACTGAAGAAAT----------------AAATTTAGAA i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4398006 66 + 32716333 -----------aaaaGCAG----------TGGTGTATTATGACATACAGTGATTTTAGGAAACTCCACTGAACAAAT----------------AAATTTAGAA i nomLeu3.chr25 I 1015 C 0 s rheMac3.chr3 168512099 66 - 198365852 -----------AAAAGTAG----------TGGTATATTATGACATACAGTGATTTTAGGGAACTCCACTGAAGAAAT----------------AAATTTAAAA i rheMac3.chr3 I 1 C 0 s macFas5.chr3 162174969 66 - 192294377 -----------AAAAGTAG----------TGGTATATTATGACATACAGTGATTTTAGGGAACTCCACTGAAGAAAT----------------AAATTTAAAA i macFas5.chr3 I 1 C 0 s papAnu2.chr3 150859717 66 - 180432695 -----------AAAAGTAG----------TGGTATATTATGACATACAGTGATTTTAGGGAACTccactgaagaaat----------------aaatttaaaa i papAnu2.chr3 I 1 C 0 s chlSab2.chr2 14960422 76 - 90373283 -----------AAAAGTAGTGGTATATTATGGTATATTATGACATACAGTGATTTTAGGGAACTCCACTGAAGAAAT----------------AAATTTAAAA i chlSab2.chr2 I 1 C 0 s calJac3.chr21 21887660 65 + 50472720 -----------AAAAGCAG----------TGGCATATTATGACATACAGTGATTTTAGGGAACTCCACTGAAGAGTT----------------CTG-TTAGAA i calJac3.chr21 I 7 C 0 s canFam3.chr31 13785593 92 + 39895921 AAAACAACAACAACAACAGAG--------CAATATATTATGACACAGA---ACTCCAGTGAACTCCACTTAAAAAATGTGGAACTCTTTATAGAATTTTAAAA i canFam3.chr31 C 0 I 144 e mm10.chr16 78093388 3140 + 98207768 I e ponAbe2.chr21 16883629 1012 + 48394510 I a score=182845.000000 s hg38.chr21_KI270874v1_alt 24465 73 + 166743 TTCTGTCATG----------TAAGATTT----------------------TAAAAATCAAAAACTACTGGGGCTTTTCCTAGAGATTATCATTATTCCTTTTTAT s panTro4.chr21 3637180 73 + 32799110 TTCTGTCATG----------TACGATTT----------------------TAAAAATCAAAAACTACTGGGGCTTTTCCTAGAGATTATCATTATTCCTTTTTAT i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4398072 73 + 32716333 TTCTGTTATG----------TAAGATTT----------------------TAAAAATCAAAAACTACTGGGGCTTTTCCTGGAGATTATCATTATTCCTTTTTAT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168512165 73 - 198365852 TTCTGTTATG----------TACGATTT----------------------TAAAAATCAAAAACTACTGGGACTTTTCCCAGAGATTATCATTATTCCTTTTTAC i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162175035 73 - 192294377 TTCTGTTATG----------TACGATTT----------------------TAAAAATCAAAAACTACTGGGACTTTTCCCAGAGATTATCATTATTCCTTTTTAC i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150859783 72 - 180432695 ttctgttatg----------taagattt----------------------taaaaatc-aaaactactgGGACTTTTCCCAGAGATTATCATTATTCCTTTTTAC i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14960498 73 - 90373283 TTCTGTTATG----------TAAGATTT----------------------TAAAAATCAAAAACTACTGGGACTTTTCCCAGAGATTATCATTATTCCTTTTTAC i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21887725 73 + 50472720 ATCTGTTATG----------TGGGACTT----------------------TAAAAATCAAAAACTACTGGGGCTTTTCCTAGAGATTATCATTATTCCTTTTTAT i calJac3.chr21 C 0 C 0 s canFam3.chr31 13785829 105 + 39895921 gtctctcatgaataaataaataaaatattctaaaaaaaaCAAATAAAAAATAAAAATCAAGGACTACCAGTACTTGCTTAGAAAATGGTCATTATTCCTTTTCTT i canFam3.chr31 I 144 C 0 e mm10.chr16 78093388 3140 + 98207768 I e ponAbe2.chr21 16883629 1012 + 48394510 I a score=479868.000000 s hg38.chr21_KI270874v1_alt 24538 158 + 166743 TAATAATAACTTCTAGCCCTTATGGACTGTATTACTATGTTCATGTTC----AGCTAGACAATGGTGAGGTTGAAATCTAAAGACATTTTTCAAAGGAAGACTGTGCTCTTTTCTTTATAGCACACTGCCTCTATTTTATTAAGCAAGGGTAACTAAAAGGT s panTro4.chr21 3637253 158 + 32799110 TAATAATAACTTCTAGCCCTTATGGACTGTATTACTATGTTCATGTTC----AGCTGGACAATGGTGAGGTTGAAATCTAAAGACATTTTTCAAAGGAAGACTGTACTCTTTTCTTTATAGCACACTGCCTCTATTTTATTAAGCAAGGGTAACTAAAAGGT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16884641 155 + 48394510 TAATAATAACTTCTA-CCCTTATGGACTGTA-TACTACGTTCATGCTC----AGCTAGACAATGGTGAGGTTGAAATCTAAAGACA-TTTTCAAAGGAGGACTGTACCCTTTTCTTTATGGCCCACTGCCTCTATTTTATTAAGCAAGGGTAACTAAAAGGT i ponAbe2.chr21 I 1012 C 0 s nomLeu3.chr25 4398145 156 + 32716333 TAATAATAACTTCTACCCCTTATAGACTGTATTACTATGTGCATGTTC----AGCTAGACAATGGTGAGGTTGAAATCTAAAGACATTTTTCAAAGGAAGAC--TACTCTTTTCTTTATAGCACACTGCCTGTATTTTATTAAGCAAGGGTAACTAAAAGGT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168512238 155 - 198365852 TAATAATAATTTCTACCCCTTATGGACTGTATCACTATGTTCATGTTC----AGCTAGACAATGGTGAGGTTGAAATCTAAAGACATTTTTCAAAGGAAGACTGTACTCTTTTCTTTGTGGCACACTGCCTTTATTTTATTAAGCAAGGGTAACTAAAA--- i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162175108 155 - 192294377 TAATAATAATTTCTACCCCTTATGGACTGTATCACTATGTTCATGTTC----AGCTAGACAATGGTGAGGTTGAAATCTAAAGACATTTTTCAAAGGAAGACTGTACTCTTTTCTTTGTGGCACACTGCCTTTATTTTATTAAGCAAGGGTAACTAAAA--- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150859855 158 - 180432695 TAATAATAATTTCTACCCCTTATGGACTGTATCACTATGTTCACGTTC----AACTAGACAATGGTGAGGTTGAAAtctaaagacatttttcaaaggaagactgTACTCTTTTCTTTGTGGCACACTGCCTCTATTTTATTAAGCAAGGGTAACTAAAAGGT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14960571 158 - 90373283 TAATAATAATTTCTACCCCTTATAGACTGTAGCACTATGTTCATGTCC----AGCTAGACAACGGTGAGGTTGAAATCTAAAGACATTTTTCAAAGGAAGACTGTACTCTTTTCTTTGTAGCATACTGCCTCTATTTTATTAAGCAAGGGTAACTAAAAGGT i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21887798 135 + 50472720 -----------TTTA-TTTTTATGGACTGTATTACTATGTTCACGTTC----TGCT-----------AGGCTGAAATCTAAAGACATTTATGAAAAGAAGACTGTATTCTTTTCTTTATACCATACGGCCTCCATTTAATTAAGCAAAGATAACTAAAAAGT i calJac3.chr21 C 0 C 0 s canFam3.chr31 13785934 157 + 39895921 ----AATAATTGCTGTCTCTTATTGAGTGTgttactatgtccgtgatcaaatagctagaaaatggcaaggctgaaatttaaagactttttaacaaaaaagactat-ccctcttctttatcccacactgattctATTTAATTAATCAAGAGTCATTAAggggt i canFam3.chr31 C 0 I 125 e mm10.chr16 78093388 3140 + 98207768 I a score=2651907.000000 s hg38.chr21_KI270874v1_alt 24696 814 + 166743 TGTCTTAC-----------------------------------------AATCTT-------------------ACAAAAGATGGTCTG-------------TCAGATTCCTTCCCTTATTCTTAGCCAATTCTAA---TTGTGGTAGATTTGTTTTTGTCTGGTGGGTTTTATGTTTTTTATTTACACCTCTTTGTTCTTGGTTTCATTATCAATAATTTCTTAAA-----TTTGGAGGA-----GGTCAGACAGTTATCTAGCCTCTGGGGACTCAACTATGGTCCCTTCTCTCAATGATTTTAAGATGTGGTGAACAAA--TTCACTACCTGGTGAAGCTAAAGTGCAGGATTTCTTCACTGTTCTCTGAGTATGCATGATTGTCAGATATATCAACTTTCA-GATAATGAACACATGGCACCATTGTTGTCTCTGAGACTTGA-GGATGAGGTGAGGAAAACCATCAATAGTGGTTGAATTTCTACGATTCCAGGATTCCTATAAACCATGGACGAGATGTCGTAGAGAGGGTATAAGTGGAGGGCAGGATGTAGAGTTCCACTTGTATGTGAAACTC--TGAG-CTTTTGACTCCTGATACATAATTGGATATAAACAGCTTTTCTATTTGTAAAGGGGAAGGCATTAGGAGCTTTTCAGTAAAGACTTGCATGTCTAAAAAAGAAAATGGGGGAAGTATTTTTTG--GTCCAAAACACCACAAAAAATAAAAGTAATAACTTTCAAACAGGATTAATATGAGTTATGTCTACAGAAGAAGAGAGGTGACTAATAAATTTTACACCTCA-------ATGTA--CTCTCTTATTTTAATATGAATGTGTAGTATATATGGCTTTCTCACAGGATTCTCACAACACATCTTCAATGTTCACTGAGGACTTCTTGC s panTro4.chr21 3637411 812 + 32799110 TGTCTTAC-----------------------------------------AATCTT-------------------ACAAAAGATGGTCTG-------------TCAGATTCCTTCCCTTATTCTTAGCCAATTCTAA---TTGTGGTAGATTTGTTTTTGTCTGGTGTGTTTTATGTTTTTTATTTACACCTCTTTGTTCTTGGTTTCATTATCAATAATTTCTTAAA-----TTTGGAGGG-----GGTCAGACAGTTATCTAGCCTCTGGGGACTCAACTATGGTCCCTTCTCTCAATGATTTTAAGATGTGGTGAAAAAA--TTCACCACCTGGTGAAGCTAAAGTGCAGGCTTTCTTCACTGTTCTCTGAGTATGCATGATTGTCAGATATATCAACTTTCA-GATAATGAACACATGGCACCATTGTTGTCTCTGAGACTTGA-GGATGAGGTGAGGAAAACCATCAATAGTGGTTGAATTTCTACGATTCCAGGATTCCTATAAACCATGGACAAGATGTCGTAGAGAGGGTATAAGTGGAGGGCAGGATGTAGAGTTCCACTTGTATATGAAACTC--TGAG-CTTTTAACTCTTGATACATAATTGGATATAAACAGCTTTTCTATTTGTAAAGGGGAAGGCATTAGGAGCTTTTCAGTAAAGACTTGCATGTCTAAAAAAGAAAATGGGGGAAGTATTTTTTG--GTCCAAAACACCACAAAAAATAAAAGTAATAACTTTCAAACAGGATTAATATGAGTTATGTCTACAGAAGAAGAGAGGTGACTAATAAATTTTACACCTCA-------ATGTA--CTCTCTTATTTTAATATGAATGTGTAG--TATATGGCTTTCTTACAGGATTCTCACAACACATCTTCAATGTTCACTGAGGACTTCTTGA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16884796 815 + 48394510 TGTCTTAC-----------------------------------------AATCTT-------------------ACAAAAGATGGTCTG-------------TCAGATTCCTTCCTTTATTCTTAGCCAATTCTAATTGTTGTGGTAGATTTGTTTTTGACTCATGGGTTTTATGTTTTTTATTTACACCTCTTTGTTCTTGTTTTCATTATCAATAATTTCTTAAA-----TTTGGAGGG-----GGTCAGACAGTTAGCTAGCCTCTGGGGATTCAACTATGGTCCCTTCTCTCAATAATTTTAAGATGTGGTGAAAAAA--TTCACTACCTGGTAAAGCTAAAGTGCAGGCTTTCTTCACTGTTCTCTGAGTATGCATGATTGTCAGATATATCAACTTTCA-GATAATGAACACATGGCACCATTGTTGTCTCTGAGAGTTGA-GGATGAGGTGAGGAAAACCATCAATAGTGGTTGAATTTCTACAATTCCAGGATTCCTATAAACCATGTATGAGATATCGTAGAGAGGGTATAAGTGGAGGGCAGGATGTAGAGTTCCACTTGTATGTGAGACTC--TGAG-CTTTTGACTCCCGACACATAATTGGGTATAAACAGCTTTTCTATTTGTAAAGGGGAAGGCATTAGGAGCTTTTCAGTAAAGCCTTGGATGTCTAAAAAAGAAAATGGGGGAGGTATTTTTTG--GTCCAAAACACCACAAAAAATAAAAGTAATAACTTTCAAACAGGATTAATATGAGTTATGTCTACAGAAGAAGAGAGGTGACTAATAAATTTTACACCTTA-------ATGTA--CTCTCTTATTTTAATATGAATGTGTAG--TATATGGCTTTCTCACAGGATTCTCACAACACATCTTCAGTGTTCACTGAGGACTTCTTGC i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4398301 815 + 32716333 TGTCTTAC-----------------------------------------AATCTT-------------------ACAAAAGATGGTCTG-------------TCAGATTCCTTCCCTTATTCTTAGCCAATTCTAATTGTTGTAGTAGATTTGTTTTTGTTTCGTGGGTTTTATGTTTTTTATTTACACCTCTTTGTTCTTGGTTTCATTATCAATAATTTCTTAAA-----TTTGGAGGG-----GGTCAGACAGTTATCTAGCCTCTGGGGACCCAACTATGCTCCCTTCTCTCAATGATTTTAAGATCTGGTGAAAAAA--TTCACTACCTGGTAAAGCTAAAATGCAGGCTTTCTTCACTGATCTCTGAGTATGTGTGATTGTCAGATATATCAACGTTCA-GATAATGAACACATGGCACCATTGTTGTCTCTGAGAGTTGA-GGATGAGGTGAGGAAAACCATCAACAGTGGTTGAATTTCTACAATTCCAGGATTCCTATAAACCATGGACGAGATGTCGTAGAGAGGGTATAAGTAGAGGGCAGGATGTAGAGTTCCACTTGTATGTGAAACTC--TGAG-CTTTTGACTCCCGAAACATAATTCGATATAAACAGCTTTTCTATTTGTAAAGGGGAAGGCATTAGGAGCTTTTCAGTATAGCCTTGCATGTCTGAAAAAGAAAATGGGGGAGGTATCTTTTG--GTCCAAAACACCACAAAAAATAAAAGTAATAACTTTCAAACAGGATTAATATGAGTTATGTCTACAGAAGAAGAGAGGCGACTAATAAATTTTACACCTCA-------ATGTA--CTCTGTTATTTTAATATGAATGTGTAG--CATATGGCTTTCTCACAGGATTCTCACAACACATCTTCAATGTTCTCTGAGGACTTCTTGC i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168512393 818 - 198365852 TGTCTTAC-----------------------------------------AATCTT-------------------ACAAAAGGTGATCTG-------------TCAGATTCCTTCCCTTATTCTTAGCTGATTTTAATTGTTGTAGTAGATTTGTTTTTGTTTCATGGGTTTTATGTTTTTTCTTTACACCTGTTTGTTCTTGGTTTCATTATCAATAATTTCTTAAA-----TTTGGAGGGGGGTTGGTCAGACAGTTATCTAGCCTCTGGAGACTCAACTATGGTCCCTTTTCTCAATGATTTTAACATCTGGTGAAAAAA--TTCACTACCTGGTAAAGCTAAAGTACAGGCTTTCTTCACTGTTCTCTGAGTATGCGTGATTGTCAGATATATCAACTTTCA-GATAATGAAAGCATGGCACCATTGTTTTCTCTAAGAGTTGA-GGATGAGATGAGGAAAATCATCAATGTCAGCTGAATTTCTACGATTCCAGGATTCCTATAAAGCATGGACAAGGTGTCATAGATAGGGTATAAGTGGAGGGCAGGATGTAGAGTTCCACTTGTACGTGAAACTC--TGAG-CTTTTGATTCCTGACACATAATTGGATATAAACAGCTTTACTGTTTGTAAAGGGGAAGGCATTAGGAGCTTTTCAGTATACCCTTCCATGTCTAAAAATGAAAATGGGGGAGGTATCTTTTG--GTCCAAAACACCAAGAAAAACAAAACTAATAACTTCCAAACAGGATTAATAT--GTTATGTCTACAGAAGAAGAGAGGTGACTAATAAATTTTACATCTCA-------ATGTA--CTCTCTTATTTTAATATGAATGTGTAG--TATATGGCTTTCTCACAGGATTCTCAGAACACATTTTCAATGTTCTCTGAGGACTTCTTGC i rheMac3.chr3 C 0 I 3 s macFas5.chr3 162175263 818 - 192294377 TGTCTTAC-----------------------------------------AATCTT-------------------ACAAAAGGTGGTCTG-------------TCAGATTCCTTCCCTTATTCTTAGCTGATTTTAATTGTTGTAGTAGATTTGTTTTTGTTTCATGGGTTTTATGTTTTTTCTTTACACCTGTTTGTTCTTGGTTTCATTATCAATAATTTCTTAAA-----TTTGGAGGGGGGTTGGTCAGACAGTTATCTAGCCTCTGGAGACTCAACTATGGTCCCTTTTCTCAATGATTTTAACATCTGGTGAAAAAA--TTCACTACCTGGTAAAGCTAAAGTACAGGCTTTCTTCACTGTTCTCTGAGTATGCGTGATTGTCAGATATATCAACTTTCA-GATAATGAAAGCATGGCACCATTGTTTTCTCTAAGAGTTGA-GGATGAGATGAGGAAAATCATCAATGTCGGCTGAATTTCTACGATTCCAGGATTCCTATAAAGCATGGACAAGGTGTCATAGATAGGGTATAAGTGGAGGGCAGGATGTAGAGTTCCACTTGTACGTGAAACTC--TGAG-CTTTTGATTCCTGACACATAATTGGATATAAACAGCTTTACTGTTTGTAAAGGGGAAGGCATTAGGAGCTTTTCAGTATACCCTTCCATGTCTAAAAATGAAAATGGGGGAGGTATCTTTTG--GTCCAAAACACCAAGAAAAACAAAACTAATAACTTCCAAACAGGATTAATAT--GTTATGTCTACAGAAGAAGAGAGGTGACTAATAAATTTTACATCTCA-------ATGTA--CTCTCTTATTTTAATATGAATGTGTAG--TATATGGCTTTCTCACAGGATTCTCAGAACACATTTTCAATGTTCTCTGAGGACTTCTTGC i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150860013 817 - 180432695 TGTCTTAC-----------------------------------------AATCTT-------------------ACAAAAGGTGGTCTG-------------TCAGATTCCTTCCCTTATTCTTAGCTGAttttaattgttgtagtagatttgtttttgtttcatgggttttatg-tttttctttacacctgtttgttcttggtttcATTATCAGTAATTTCTTAAA-----TTTGGAGGGGGGTTGGTCAGACAGTTATCTAGCCTCTGGAGACTCAACTATGGTCCCTTCTCTCAATGATTTTAAGATCTAGTGaaaaaa--aTCACTACCTGGTAAAGCTAAAGTACAGGCTTTCTTCACTGTTCTCTGAGTATGCGTGATTGTCAGATATATCAACTTTCA-AATAATGAAAGCATGGCACCATTGTTTTCTCTAAGAGTTGA-GGATGAGGTGAGGAAAATCATCAATATCGGCTGAATTTCTACGATTCCAGGATTCCTATAAAGCATGGACAAGGTGTCATAGATAGGGTATAAGTGGAAGGCAGGATGTAGAGTTCCACTTGTACGTGAAACTC--TGAG-CTTTTGATTCCTGACACATAATTGGATATAAACAGCTTTTCTATTTGTAAAGGGGAAGGCATTAGGAGCTTTTCAGTATACCCTTCCatgtctaaaaatgaaaatggggGAGGTATCTTTTG--GTCCAAAacaccaagaaaaacaaaactaataacTTCCAAACAGGATTAATAT--GTTATGTCTACAGAAGAAGAGAGGTGACTAATAAATTTTACATCTCA-------ATGTA--CTCTCTTATTTTAATATGAATGTGTAG--TATATGGCTTTCTCACAGGATTCTCAGAACACATTTTCAATGTTCTCTGAGGACTTCTTGC i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14960729 817 - 90373283 TGTCTTGC-----------------------------------------AATCTT-------------------ACAAAAGATGGTCTG-------------TCAGATTCCTTCCCTTATTCTTAGCCGATTTTATTTGTTGTAGTAGATTTGTTTTTGTTTCATGGGTTTTATGTTTTTTCTTTACACCTGTTTGTTCTTGGTTTCATTATCAATAATTTCTTACA-----TTTGGAGGGGGGTTGGTCAGACAGTTATCTAGCCTCTGGAGACTCAACTATGGTCCCTTCTCTCAGTGATTTTAAGATCTGGTGAAAAAA--ATCACTACCTGGTAAAGCTAAAGTACGGGCTTTCTTCACTGTTCTCTGAGTAGGCGTGATTGTCAGATATATCAACTTTCA-GACAATGAAAGCACAGCACCATTG-TTTCTCTAAGAGTTGA-GGATGAGGTGAGGAAAACCATCAATATCGGTTGAATTTCTACAATTCCAGGATTCCTATAAAGCATGGACAAGGTGTCGTAGATAGGGTATAAGTGGAGGGCAGGATGTAGAGTTCCACTTGTATGTGAAACTC--TGAG-CTTTTGATTCCTGACACATAATTGGATATAAACAGCTTTTCTATTTGTAAAGGGGAAGGCATTAGGAGCTTTTCAGTACACCCTTCCATGTCTAAAAGAGAAAACGGGGGAGGTATATTTTG--GTCCAAAACACCACGAAAAATAAAAGTAATAACTTCCAAACAGGATTAATAT--GTTATGTCTACAGAAGAAGAGAGGTGACTAATAAATTTTACATCTCA-------ATGTA--CTCTCTTATTTTAATATGAATGTGTAG--TATATGGCTTTCTCACAGGATTCTCAGAACACATTTTCAATGTTCTCTGAGGACTTCTTGC i chlSab2.chr2 C 0 I 3 s calJac3.chr21 21887933 811 + 50472720 TGTCTTAC-----------------------------------------AA-CTT-------------------ACAAAAGATGATATG-------------TCAGATTCCTTCTCTTATTTGTAGCCAATTCTAATTGTTGTAGTAGATTTGTTTTTGTTTCATGGGTTTTATGCTTTTTCTTTATACGTCTTTGTTCTTGGTTTCATTATCAATAATTTCTTAAA-----TTTGGGGTGGG---GGTCAGACAATTATCTAGCCTCTGGAGACTCAATTATTGTCCCTTCTCTCAATGATTTTAAGATTTGTTAAAAAAAATTTCACTACCTGGTAAAGCTGAAGTGCAGGCTTTCTTCACTGCTTTCTGAGTGTGCAGGATTGTCAGAAATATCACCTTTCA-GTTAATAAAAATGTGACACCATTGTTCTCTGTGAAAGTTGA-TGACGAGGAAGGGAAAAGCATCAATATTGGTTGAATTTCTAGGATTCCAGGATTTCTATAAACCATGGACAAGGTGTCATAGAGAGGGTGTAAGTGGAGGGCAGGATGTGGAGTTCCACTTGCAGGTGAAACTCTTTGTG-TTTTTGACTCCTGACACATAATTGCATATAAACAGCTTTTTTATTTTTAAAGGGAAAGGCATTGGGAGCTTTTCAGTATAGCTTTCCACGGCTAAAAACAAAAATGAGGGAGGTATGTTTTG--ATCCAAAACACCATGAAAGAAAAAA-----ACCTTTCAAAGAGGATTGA-----GTTATGTCTACACAAGAAGAGAAGTGACTAATAAATTTTACACCTCA-------ATTTACTCTCTCTCATTTTAGTATGAATGTGTAG--TATATGGATTTCTCACAGGATTCTCTGAACACATTTTCAACG-TCTCTGAGGACTTCTTGC i calJac3.chr21 C 0 I 1 s canFam3.chr31 13786216 876 + 39895921 tgccttgctccccttgcttgtgctctctctctatcaagtaaataaataaaatctttTTTAAAAATCAAAGGTCATTAAAAGATTGTCTTGCATTCTTGTATCTCATATCCCTTCCCTTATTCTCAGCCAATTCTAACTGTTGCAGTAGATT---------------GGTTTTAGGCTTTTTACTCACAGCCTTCAATTCTTGGTTTCATCAACAATAATTTTTTAAATATCCTTTTTA--------GATCAGACATCTGTCTAACCTCTGGAGCCTTAAA---GGCCTCTAGTCTCAATAATTTTAGAATCCAGTGAAAATA--TTCGCTATCTGGTAAAGCTAAAATATGGGCTTCCTTCACTATTTTCCAAGTGTGTGTAATCGTGAGAAGGATCCACTTTCATTTTCATACAGCCATGAGACCACTGGAATCTCTGAGAATTGAGGGACCAGGTAAGGAAATTCACCAATATTGGTTGAATTTGCAGGATTCCAGAGTTCCCATAAACCATGAAGAATGTGTGGTAGAGAAAGTAAAAGTAGAGGGTAGGACATGAAATTCCACTTATAGGTAAAGGTC--TATGAATTTTGACTTCTGATATATAACTGAATATAAATACCTTTTCCACTTGTAAAGAGA---GTAATGGGTGATTTTCAGTATAGCTTTCCAAGACTAAAAA-GAAAATTACAGAGATATATTGTGTATATAAAAAAATTATGAGAGAGAAAAGTAATAACTTTCAAATAGGATTAATATGAGTTATACCTGT----GAGGAGGAATGACTAATAAATTTTATGCCTCAGTGAAACATGCG--CTCCCTTATTTTACTATGGATATCTAG--TATATGAGTTTCTCTCAAGGTTCTCAGAACACATTTCCAATAATCTCTGAGGTCTTCTGGG i canFam3.chr31 I 125 C 0 e mm10.chr16 78093388 3140 + 98207768 I a score=-414.000000 s hg38.chr21_KI270874v1_alt 25510 1 + 166743 T s panTro4.chr21 3638223 1 + 32799110 G i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16885611 1 + 48394510 A i ponAbe2.chr21 C 0 C 0 s canFam3.chr31 13787092 1 + 39895921 T i canFam3.chr31 C 0 C 0 e calJac3.chr21 21888744 1 + 50472720 I e mm10.chr16 78093388 3140 + 98207768 I e rheMac3.chr3 168513211 3 - 198365852 I e chlSab2.chr2 14961546 3 - 90373283 I e macFas5.chr3 162176081 0 - 192294377 C e papAnu2.chr3 150860830 0 - 180432695 C e nomLeu3.chr25 4399116 0 + 32716333 C a score=180.000000 s hg38.chr21_KI270874v1_alt 25511 1 + 166743 T s panTro4.chr21 3638224 1 + 32799110 T i panTro4.chr21 C 0 C 0 s calJac3.chr21 21888745 1 + 50472720 T i calJac3.chr21 I 1 C 0 s canFam3.chr31 13787093 1 + 39895921 C i canFam3.chr31 C 0 C 0 e mm10.chr16 78093388 3140 + 98207768 I e rheMac3.chr3 168513211 3 - 198365852 I e ponAbe2.chr21 16885612 0 + 48394510 C e chlSab2.chr2 14961546 3 - 90373283 I e macFas5.chr3 162176081 0 - 192294377 C e papAnu2.chr3 150860830 0 - 180432695 C e nomLeu3.chr25 4399116 0 + 32716333 C a score=-828.000000 s hg38.chr21_KI270874v1_alt 25512 5 + 166743 GTtt-----t- s panTro4.chr21 3638225 10 + 32799110 GTTttattat- i panTro4.chr21 C 0 C 0 s canFam3.chr31 13787094 5 + 39895921 -TTT-----TT i canFam3.chr31 C 0 C 0 e calJac3.chr21 21888746 0 + 50472720 C e mm10.chr16 78093388 3140 + 98207768 I e rheMac3.chr3 168513211 3 - 198365852 I e ponAbe2.chr21 16885612 0 + 48394510 C e chlSab2.chr2 14961546 3 - 90373283 I e macFas5.chr3 162176081 0 - 192294377 C e papAnu2.chr3 150860830 0 - 180432695 C e nomLeu3.chr25 4399116 0 + 32716333 C a score=89943.000000 s hg38.chr21_KI270874v1_alt 25517 999 + 166743 tattattattattatactttaagttttacggtacatgtgcacaatgtgccagttagttacatatgtatacatgtgccatgctggtgtgctgcacccattaactcgtcatttagcattaggtatatctcccaatgccatccctcccccct-------ccccacaacagtccccagagtgtgatgttccccttcctgtgtccatgtgttctcattgttcaattcctacctatgagtgagaatatgtggtgtttggttttttgttcttgcgatagtttactgagaatgatgatttccaatttcatccatgtccctacaaaggacatgaactcatcattttttatggctgcataggattccatggtgtatatgtgccacattttcttaatccagtctatcattgttggacatttgggttggttccaagtctttgctattgtgaatagtgccacaataaacatacgtgtgcatgtgtctttatagcagcatgatttatagtcctttgggtatatacccagtaatgggatggctgggtcaaatggtatttctagttctagatccctgaggaatcgccacactgacttccacaagggttgaactagtttacagtctcaccaacagtgtaaaagtattcctatttctccacatcctctccagcacctgttgtttcctgactttttaatgattgccattctaactggtgtgagatggtatctcattgtggttttgatttgcatttctctgatggccagttgatggtgagcattttttcatgtgttttttggctgcataaatatcttcttttgagaagtgtctgttcatgtccttcacccactttttgattggttgtttgttttttttcttgtaaatacagacaagcaaatgctgagagattttgtcagcaccaggcctgccctaaaagagcgcctgaaggaagcactaaacatggaaaggaacaaccggtaccagccactgcaaaatcatgccaaattgtaaagaccaccgagGT s panTro4.chr21 3638235 1005 + 32799110 tattattattattatactttaagttttagggtacatgtgcacaatgtacaggttagttacatatgtatacatgtgccatgctggtgtgctgcacccattaactcgtcatttagcattaggtatatctcccaatgccatccctcccccctccccccaccccacaacagtccccagagtgtgatgttccccttcctgtgtccatgtgttctcattattcaattcccacctatgagtgagaatatgtggtgtttggttttttgttcttgcgatagtttattgagaatgatgatttccaatttcatccatgtccctacaaaggacatgaactcatcattttttatggctgcatagtgttccatggtgtatatgtgccacattttcttaatccaatctatcattgttggacatttgggttggttccaagtctttgctattgtgaatagtgccgcaataaacctacgtgtgcatgtgtctttatagcagcatgatttatagtcctttgggtatatacccagtaatgggatggctgggtcaaatgctatttctagttctagatccctgaggaatcgcctcactgacttccacaagggttgaactagtttacagtcccaccaacagtgtaaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgactttttaatgattgccattctaactggtgtgagatggtatctcactgtggttttgatttgcatttctctgatggccag-tgatgatgagcattttttcatgtgttttttggctgcataaatatcttcttttgagaagtgtctgttcatgtccttcacccactttttgattggttgtttgttttttttcttgtaaataccgacaagcaaatgctgagagattttgtcaccaccaggcctgccctaaaagagcgcctgaaggaagcactaaacatggaaaggaacaaccggtaccagccactgcaaaatcatgccaaattgtaaaggccatcgaGGT i panTro4.chr21 C 0 C 0 e calJac3.chr21 21888746 0 + 50472720 C e canFam3.chr31 13787099 0 + 39895921 C e mm10.chr16 78093388 3140 + 98207768 I e rheMac3.chr3 168513211 3 - 198365852 I e ponAbe2.chr21 16885612 0 + 48394510 C e chlSab2.chr2 14961546 3 - 90373283 I e macFas5.chr3 162176081 0 - 192294377 C e papAnu2.chr3 150860830 0 - 180432695 C e nomLeu3.chr25 4399116 0 + 32716333 C a score=1000.000000 s hg38.chr21_KI270874v1_alt 26516 1 + 166743 G s panTro4.chr21 3639240 1 + 32799110 G i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4399116 1 + 32716333 G i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162176081 1 - 192294377 G i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150860830 1 - 180432695 G i papAnu2.chr3 C 0 C 0 e calJac3.chr21 21888746 0 + 50472720 C e canFam3.chr31 13787099 0 + 39895921 C e mm10.chr16 78093388 3140 + 98207768 I e rheMac3.chr3 168513211 3 - 198365852 I e ponAbe2.chr21 16885612 0 + 48394510 C e chlSab2.chr2 14961546 3 - 90373283 I a score=-1624.000000 s hg38.chr21_KI270874v1_alt 26517 2 + 166743 -TG s panTro4.chr21 3639241 2 + 32799110 -TG i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16885612 2 + 48394510 -TG i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4399117 2 + 32716333 -TG i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162176082 2 - 192294377 TT- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150860831 2 - 180432695 tt- i papAnu2.chr3 C 0 C 0 e calJac3.chr21 21888746 0 + 50472720 C e canFam3.chr31 13787099 0 + 39895921 C e mm10.chr16 78093388 3140 + 98207768 I e rheMac3.chr3 168513211 3 - 198365852 I e chlSab2.chr2 14961546 3 - 90373283 I a score=9828.000000 s hg38.chr21_KI270874v1_alt 26519 3 + 166743 TTT s panTro4.chr21 3639243 3 + 32799110 TTT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16885614 3 + 48394510 TTT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4399119 3 + 32716333 TTT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168513214 3 - 198365852 TTT i rheMac3.chr3 I 3 C 0 s macFas5.chr3 162176084 3 - 192294377 TTT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150860833 3 - 180432695 ttt i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14961549 3 - 90373283 TTT i chlSab2.chr2 I 3 C 0 s calJac3.chr21 21888746 3 + 50472720 TTT i calJac3.chr21 C 0 C 0 e canFam3.chr31 13787099 0 + 39895921 C e mm10.chr16 78093388 3140 + 98207768 I a score=572556.000000 s hg38.chr21_KI270874v1_alt 26522 187 + 166743 TTAATTGATGGGATAAAGTAGGTACAGAGAACGAATAAGCACATGGAATTGCAAAGGTTGCTT--TGAAGCATGCTCTATTAACTGCCTATTATATATAATTTCAAATGGAGTTGGAGGGCCATAAAATCCTATAAGCAACTtttaattaaatttaatctataattaattcataatttaattcatattt s panTro4.chr21 3639246 186 + 32799110 TTAATTGATGGGATAAAGTAGGTACAGAGAACGAATAAGCACATGGAATTTCAAAGGTTGCTT--TGAAGCATGCTCTATTAAGTGCCTATTATATATAATTT-AAATGGAGTTGGAGGGCCATAAAATCCTATAAGCACCttttaattaaatttaatctataattaattcataatttaattcatattt i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16885617 187 + 48394510 TTAATTGATGGGATAAAGTGGGTACAGAGAACGAATAAGCATATGGAATTTCAAAGGTTGCTT--TGAAGCATGCTCTATTAAGTGCCTATGATATATAATCTCAAATGGAGTTGGAGGGCCATAAAATCCTATAAGCACCTtttaatttaatttaatccataattaattcataatttaattcatattt i ponAbe2.chr21 C 0 I 11020 s nomLeu3.chr25 4399122 187 + 32716333 TTAATTGAAGGGATAAAGTAGGTACAGAGAATGAATAAGCACATGGAATTTCAAAGGTTGCTT--TGAAGCATGCTCTATTAAGTGCCTATTATATATAATTTCAAATGGAGTTGGAGGGCCATAAAATCCTATAAGGACCTtttaatttaatttaatccataattatttcataatttaattcatattt i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168513217 181 - 198365852 TTAATTGATGGGATAAAGTGGGTACAGAGAACAAATAAGCACATGGAGTTTCAAAGGCTGCTT--TGAAGCATGCTCCATTAAGTGCCTATTATATGTAATTTCAAA------TGGAGGGCCATGAAATCCTATAAGCACCTTTTAATTtaatttagtccataattaattcataatttaattcatattt i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162176087 181 - 192294377 TTAATTGATGGGATAAAGTGGGTACAGAGAACAAATAAGCACATGGAGTTTCAAAGGCTGCTT--TGAAGCATGCTCCATTAAGTGCCTATTATATGTAATTTCAAA------TGGAGGGCCATGAAATCCTATAAGCACCTtttaatttaatttagtccataattaattcataatttaattcatattt i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150860836 181 - 180432695 ttAATTGATGGGATAAAGTGGGTACAGAGAACAAATAAGCACATGGAGTTTCAAAGGCTGCTT--TGAAGCATACTCCATTAAGTGCCTATTATATGTAATTTCAAA------TGGAGGGCCATAAAATCCTATAAGcaccttttaatttaatttagtccataattaattcataatttaattcatattt i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14961552 181 - 90373283 TTAATTGATGGGATAAAGTGGGTACAGAGAACAAATAAGCACATGGAGTTTCAAAGGCTGCTT--TGAAGCATGTTCCATTAAGTGCCTATTATATATAATTTCAAA------TGGAGGGCCATAAAATCCTATAAGCACCTTTCAATTTAATTTAGTCCATAATTAATTCATAATTTAATTTATATTT i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21888749 187 + 50472720 TTAATTAATGGGATAAAGTGGGTACAGAGAATAAATAAGCACATTGAGTTTCAAAGTTTGCTT--TAAAGCATGGTCTATTAAGTGCCTATTATATATAACTTCAAATGTGGTTGGATGGCCATAAAATCCTGTAAGGACCTTTTAATTGAATTTACACCATAGATACTTCATAATTTAATTCATATTT i calJac3.chr21 C 0 C 0 s canFam3.chr31 13787099 168 + 39895921 TTAACTGAAAGCATAAAGTGAAGGCAGAGAAAGAACAAGTACATGGAGTTTCAAGAGTTACAGAACGATGCATGCTCTGTCAAGCGTCTATT-TTTATAGTTGTCAATGGGG-TTCAGGGACAGGAAATCTCATAAACACCTTTTGAGT-------GCCCctgcttaaaccac--ttta---------- i canFam3.chr31 C 0 C 0 e mm10.chr16 78093388 3140 + 98207768 I a score=1575949.000000 s hg38.chr21_KI270874v1_alt 26709 692 + 166743 taatAGGACTGATTTTAGGCTTCATATTTATAGAAAACAATAAAAATTGTGATTAATATAG-GGAAAAAATGATCAGA--AGAAGGCCAAAGATAACATCCATTGCAAAGGCATTTTTGAGAAGAAGACTGTATAACATCCA-TGCAAAAGAGCTCATAAACACTAACTGCATAACTAGTGTTTAAAATAAGAGGTTTAGAGAAGCCAAATAAATAATTTCCAAGTAGAAGGGGCGGAAAAACTTCATTTATAGGGTGCCAGGATATTAGTCTGGAATCAACATGTAGAAAATCCCAGACAAGGATATGAAGAAGATTGTTAACACGAGGCTATTTAAGAATGGAGAAAAA------------------AAAAAAAAAAGAACTCCCTGTTAGGT-AAAAATTTT---------------------CCTTTCCTTAGGGTATT----AGAGTGGCCAGTTAATTATCTGCCCTCTTCATCAACTTTATAAAAca--ttttttgagtccttactaggacc--------agcacttatg------ctatgataggatcacattgattgtgtcatttagtattaacaatagcacttgcagatcgtaactgtcattatctctccatttttcccggtgaggaaactaaagctttaagatattTCTAAATACTCAAGCTTGATAATGTATTTTtataattttat-gacaataatagcacaaaaaaa---gtgtcaggaaatggagctatagtgaaacaaatttttt-- s panTro4.chr21 3639432 689 + 32799110 taataGGACTGGTTTTAGGCTTCATATTTATAGAAAACAATAAAAATTGTGATTAATATAA-GGAAAAAATGATCACA--AGAAGGCCAAAGATAACATCCATTGCAAAGGCATTTTTGAGAAGAAGACTGTATAACATCCA-TGCAAAAGAGTTCATAAACACTAACTGCATAACTAGTGTTTAAAATAAGAGGTTTAGAGAAGCCAAATAAATAATTTCCAAGTAGAAGGGGTGGAAAAACTTCATTTATAGGGTCCCAGGATATTAATCTGGAATCAACATGTAGAAAATCCCAGACAAGGATATGAAGAAGATTGTTAACACGAGGCTATTTAAGAATGGAGGAAAA------------------AAAAAAAAAAGAACTCCCTGTTGGGT-AAAAATTTT---------------------CCTTTCCTTAGGGTATT----AGAGTGGCCAGTTAATTATCTGCCCTCTTCATCAACTTTATAAAAca--ttttttgagtccttactaggacc--------agcacttatg------ctatcataggatcacattgattgtgtcatttagtattaacaatagcacttgcagatcgtaactgtcgttatctctccatttttcccggtgaggaaactaaagctttaagatattTCTAAGTACTCAAGTTTGATAATGTATTTTtataattttat-gacaataatagcacaaaaaaa---gtgtcagaaaatggagctatagtgaaacaaa---ttt-- i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4399309 686 + 32716333 taatAGGACTAGTTTTAGGCTTCATATTTATAGAAAACAATAAAAATTGTGATTAATATAG-GGAAAAAATGATCAGA--AGAAGGCCAAAGATAACATCCATTGTAAAGGCATTTTTGAGAAGAAGACTGTATAACATCCATTGCAAAAGAGCTCATAAAAACTAACTGTATAACTAGTGTTTAAAATAAGAGGTTTAGGGAAGCCAAATAAATAATTTCCAAGTAGAAGGAGCAGAAAAACTTCATTTATAGGGTGCTAGGATATTAGTCTGGAATCAACATGTAGAAAATCCCAGACAAGGATATGAAGAAGATTGTTAAGACGAGGCTATTTAAGAATGGAGAAAAA------------------AAAAAAAAAA-----CTCTGTTAGGTAAAAAATTTT---------------------CCTTTCCTTAGGGTATT----AGAGTGGCCAATTAATTATCTGCCCTCTTCATCAACTTTATAAAAca--ttttttgagtccttagtaggacc--------agcacttatg------ctatgataggatcacactgattgtgtcatttagtattaacaatagcacttgcagatcataactgtcattatctctccatttttcctggtgaggaaactaaaactttaagatattTCTAAATACTCAAGTTTGATAATGTATTTTtataattttat-gacaataagagcac-aaaaaa---gtgtcaggaaatgtagctacagtgaaacaaa--attt-- i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168513398 676 - 198365852 taatAGGGGTAGTTTTAGGCTTCATATTTATAGAAAACAATAAAAATTGTGATTAATATCA-GGAAAAAA--ATCAGA--AGAAGGCCAAAGATAACATCCATTGCAAAGGCATTTTTGAGAAAAAGAGTGTATAATACCCATTGCAAAAGAGCTCGTAAACACTAACTCTATAACTAGTGTTTAAAATAAGAGGTTTCGAGGAGCCAAATAAATAATTTCCAAGTAGAAGGAGCAGAAAAACTTCATTTATACAGTGCCAGGATATTAGTCTGGAATCAACATGTAGAAAATCCCAGACAAGGATATGAAGAAGATTGTTAAAACAAGGCTATTTAAGAATGGAAAAACA------------------AAA----------CTCCCTGTTAGGCAAAAAATTTT---------------------CCTTTCCTTAGGGAATT----AGAGGGGTCAATTAATTATCTGCCCCCTTCATCAACTTTATAAAACA-Tttttttgagtccttactaggacc--------agcacttacg------ctatgatagcatcccattgatcgtgtcatttagtattaacaatagcacttgcagatcataactgtcattatctctccatttttcctggtgaggaaactaaagctttaagatattTCTAAATACTCAAGTTTGAGAATATATTTTtataattttat-gacaataatagaac-aaaaaa---gtgtcaggaaatggagctatagtgaaacaat-------- i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162176268 676 - 192294377 taatAGGGGTAGTTTTAGGCTTCATATTTATAGAAAACAATAAAAATTGTGATTAATATCA-GGAAAAAA--ATCAGA--AGAAGGCCAAAGATAACATCCATTGCAAAGGCATTTTTGAGAAGAAGAGTGTATAATACCCATTGCAAAAGAGCTCGTAAACACTAACTCTATAACTAGTGTTTAAAATAAGAGGTTTCGAGGAGCCAAATAAATAATTTCCAAGTAGAAGGAGCAGAAAAACTTCATTTATACAGTGCCAGGATATTAGTCTGGAATCAACATGTAGAAAATCCCAGACAAGGATATGAAGAAGATTGTTAAAACAAGGCTATTTAAGAATGGAAAAACA------------------AAA----------CTCCCTGTTAGGCAAAAAATTTT---------------------CCTTTCCTTAGGGAATT----AGAGGGGTCAATTAATTATCTGCCCTCTTCATCAACTTTATAAAACA-Tttttttgagtccttactaggacc--------agcacttacg------ctatgatagcatcccattgatcgtgtcatttagtattaacaatagcacttgcagatcataactgtcattatctctccatttttcctggtgaggaaactaaagctttaagatattTCTAAATACTCAAGTTTGAGAATATATTTTtataattttat-gacaataatagaac-aaaaaa---gtgtcaggaaatggagctatagtgaaacaat-------- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150861017 677 - 180432695 taataggGCTAGTTTTAGGCTTCATatttatagaaaacaataaaaattgtgATTAATATcg-ggaaaaaa--atcaga--agaaggCCAAAGATAACATCCATTGCAAAGGCATTTTTGAGAAGAAGAGTGTATAACACCCATTGCAAAAGAGCTCATAAACACTAACTCTATAACTAGTGTTTAAAATAAGAGGTTTAGAGAAGCCAAATAAATAATTTCCAAGTAGAAGGAGCAGAAAAACTTCATTTATACAGTGCCAGGATATTAGTCTGGAATCAACATGTAGAAAATCCCAGACAAGGATATGAAGAAGATTGTTAAAACAAGGCTATttaagaatggaaaaaca------------------aaa----------ctccCTGTTAGGCaaaaaatttt---------------------cctttccttaGGGAATT----AGAGGGGTCAATTAATTATCTGCCCTCTTCATcaactttataaaaca-tttttttgagtcCTTACTAGGACC--------AGCACTTACG------CTATGATAGCATCCCATTGATCGTGTCATTTAGTATTAACAATAGCACTTGCAGATCGTAACTGTCATTATCTCTCCATTTTTCCTggtgaggaaactaaagctttaagatatttctaaatactcaagtttgagaatatatttttataattttat-gacaATAATAGAAC-AAAAAA--GGTGTCAGGAAATGGAGCTATAgtgaaacaat-------- i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14961733 680 - 90373283 TAATAGGACTAGTTTTAGGATTCATATTTATAGAAAACAATAAAAATTGTGATTAATATAG-GGAAAAAA--A-AAGATCAGAAGGCCAAAGATAACATCCATTGCAAAAGCATTTTTGAGAAGAAGAGTGTATAATACCCATTGCAAAAGAGCTCATAAACACTAACTGTATAACTAATGTTTAAAATAAGAGGTTTAGAGAAGCCAAATAAATAATTTCCAAGTAGAAGGAGCAGAAAAACTTAATTTATACAGTGCCAGGATATTACTCTGGAATCAACATGTAGAAAATCCCAGACAAGGATATGAAGAAGATTGTTAAAATAAGGCTGTTTAAGAATGGAAAAACA------------------AAA----------CTCCCTGTTAGGCAAAAAATTTT---------------------GCTTTTCTTAGGGTATT----AGAGGGGTCAATTAATTATCTGCCCTCTTCATCAACTTTATAAAACA-Tttttttgagtccttactaggacc--------agcacttatg------ctatgatagcatcccattgatcgtgtcatttagtattaacaatagcacttgcagatcgtaactgtcattatctctccatttttcctggtgaggaaactaaagctttaagatattTCTAAATACTCAAGTTTGAGAATATATTTTtataattttat-gacaataatagaac-aaaaaaaaggtgtcagaaaatggagctatagtgaaacaat-------- i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21888936 677 + 50472720 TAATAAGACTAGTTTTAGGCTTTATATTTATAAAAAGCAATAAAAATTATGATTAGTATAG-AGAAAAAA--ACAATC--AGAAGGCCAAAGATAACATCCATGGCGATGGCATTTTTGAAAAGAAGACTGTGTAATATTCATGGCAAAAGAGCTCATAAACACTAACTGTATAACTAGTGTTTAAAATAAGTGATTTAGAGAAGCCAAATCAAGAATTTTCAAGTAGAAGTGGCAGAAAAACTTTATT---------CCAGGAGATTAGTCTGGAATCAACATGCAGAAAATCCCAGACAAGGATATAGAGAG---CTTTAAAACAAGACTGCTTTTAAATGGGAAAAGA------------------GAAAT--------CTCCCTGTTAGGCAAAAAATTTT---------------------CCTTCCCTTAGGGTATC----AGAGTGGCCAATTAATTATCTGCCATCTTCATCAATGTTATAAAACA--TGTCTTGAGTCCTTACTAAGACCTTGCTAATAGCAGTCACGATTCGTCCTTACTA--ATAACAATGACTAAGTTATT--GTTATAacaatagcactttcagatcataactgtcattacttctccatttttccaggtgaggaaactaaagttttaagatattTCTAAATACTCAAGTTTCATAatgtatttttataattttat-gataataatagcac-aaaaaa--ggtgtcagagaatggagctatatagtaaaaga-----t-- i calJac3.chr21 C 0 C 0 s canFam3.chr31 13787267 608 + 39895921 taatagaactagtgttaagcttcatatttataggagacattgaaaattttgatcaacatagaagaaaata--atcagg--agagagagaaatctaataactat----------------------------------gtccactgtggaagagttgataagc----------tgaatattttt-----------GTTTACAGATAACAAACAAAGCATTGCTAGGTAGCAGGGGCAGGAAAAC----TTTATACTATTCCAGGAGATTAGTCTAGAATTAACATGTAGAAAAT-----ACAAGGATCTGAATAAGATTCTGAAAATAAGGC--------AATGGAAAAAAAACTTTCTCTTAGATGGGGAAA----------CACCCT-TCAGGTAGAGTATTTTAAAAAGTATACAACAAGTGGCCCTTCACTTGGAGAATTCTAAAAAGTGGTAAAT-------------ACCTCACCAAATTTAGAAATCATTtttgttgagtat------ggatc--------aggaactgtg------ctatgttagcataatatagattatgtcatttagtactaacaataacaccttgggatcaaaattactgttatatct--atttttccaggtaagtaaa---------------------------tcaaggtttaaaaaATATTTTTATAATGTTTTAgataatattaacac-aaagaa--ggagccaaggaacagaactacattggtacaaa--gtttct i canFam3.chr31 C 0 I 90 e mm10.chr16 78093388 3140 + 98207768 I e ponAbe2.chr21 16885804 11020 + 48394510 I a score=915617.000000 s hg38.chr21_KI270874v1_alt 27401 417 + 166743 tttttt-ttttttttgagttggagtctcactctgtcacccaggctggagtgcagtggtgagatctcagctcactgcaacctctgcctaccaggtccaagcgattttcctgcctcagcctcccaagtagctgggagtacaggcgcgtgccaccacacctggccaattttttgtatttttagtagagagggagtttcactgtgttacccaggatggtctcgatctcccgaccttgtgatctgcccgcctcatcctcccaaagtgctgggattataggtgtgagccatgtcgcctggcctagtgaaacaaaatttttgtacaattttgaaatgaagtttgtattaatccaaactgggtatttgaaagttataattattaaatataagctctagggcaactaataacaaaatatcttttaaa s panTro4.chr21 3640121 417 + 32799110 tttttt-ttttttttgagttggaatctcactctgtcacccaggctggagtgcaggggcgtgatctcagctcactgcaacatctgcctaccaagtccaagcgattttcctgcctcagcctcccaagtagctgggagtacaggcgcgtgccactacacctggccaattttttgtatttttagtagagagggagtttcaccgtgttacccaggatggtctcgatctcccgaccttgtgatctgcccgcctcatcctcccaaagtgctgggattataggtgtgagccatgtcgcctggcctagtgaaacaaaatttttgtacaattttgaaatgaagtttgtattaatccaaactgggtatttgaaagttataattattaaatataagctctagggcaactaataacaaaatatcttttaaa i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4399995 417 + 32716333 tttttt-ttttttttgagttggagtctcgctctgtcacccaggctagagtgcagtggcgcgatctcagctcactgcaacctccgcctaccaggtccaagcgatttctctgcctcagcctcctgagtagctgggagtacaggcatgtgccattacacctggccaattttttgtatttttagtagacagggagtttcgccatgttacccaggatggtctcgatctcctgaccttgtgatctgcccgcctcggcctcccaaagtgctgggattataggtgtgagccacgtcgcctggcctagtgaaataaaatttgtgtacaattttgaaatcaagtttgtattaatccaaactggatatttcaaagttgtaattattaaatataagctctagggcaactaataacaaaatatcttttaaa i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168514074 413 - 198365852 --tttt-tttttcttgaggtggagtctcactctgtcacccaggctggagtgcagggacgtgatctcggctcactgcaacctcttcctcccaggtccaagcgttttccctgccgcagcctcccaagtagctgggattacaggcacgtgccactacacctggccaattttttgtatttttagtagagaaggagtttcaccgtgttacccaggatggtcttgatcttctgaccttgtgatctgcctgccttggcctcccaaagtgctgggattacaggtgtgagccacctcgcctggcttagtgaaacacaatttttgtacagttttgaaatcaagtttgtattaatccaaaccgg--atttcaaagttataattattaactataatctctagggcaactaataacaaaatatcttttaaa i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162176944 415 - 192294377 --tttt-tttttcttgaggtggagtctcactctgtcacccaggctggagtgcagggacgtgatctcggctcactgccacctcttcctcccaggtccaagcgattttcctgccgcagcctcccaagtagctgggattacaggcacgtgccactacacctggccaattttttgtatttttagtagagaaggagtttcaccgtgttacccaggatggtcttgatcttctgaccttgtgatctgcctgccttggcctcccaaagtgctgggattacaggtgtgagccacctcgcctggcttagtgaaacacaatttttgtacagttttgaaatcaagtttgtattaatccaaaccgggtatttcaaagttataattattaactataatctctagggcaactaataacaaaatatcttttaaa i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150861694 416 - 180432695 --ttttatttttcttgaggtggagtctcactctgtcacccaggctggagtgcagggacgtgatctcggctcactgcaacctcttcctcccaggtccaagcaattttcctgccgcagcctcccaagtagctgggattacaggcacgtgccactacacctggccaattttttgtatttttagtagagaaggagtttcaccatgttacccaggatggtcttgatcttctgaccttgtgatctgcctgccttggcctcccaaagtgctgggattacaggtgtgagccacctcgcctggcttagTGAAACACAATTTTTGTACAGTTTTGAAATCAAGTTTGTATTAATCCAAACTGGGTATTTCAAAGTtataattattaactataatctcTAGGGCAACTAataacaaaatatcttttaaa i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14962413 415 - 90373283 --tttt-tttttcttgaggtggagtctcactctgtcacccaggctggagtgcagggacgtgatctcggctcactgcaacctcttcctcccaggtccaagcgattttcctgcctcagcctcccaagtagctgggattacaggcacgtgccactacacctggccaattttttgtatttttagtggagaaggagtttcaccgtgttacccaggatggtctcgatcttctgaccttgtgatctgcctgccttggcctcccaaagtgctgggattacaggtgtgagccacctcgcctggcctagtgaaacaaaatttttgtacaattttgaaatcaagtttgtattaatccaaactgggtatttcaaagttataattatggactataatctctagggcaactaataacaaaatatcttttaaa i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21889613 401 + 50472720 attttt-atttttttgagatggagtctccctctgtcacccaggctggagggcagtgatgcactctcggctcactacaaccttcgcctcctagattcaagctattcttc-acttcagcctcccaagtggctggaactatagacacgtgcaactacaactggtcaattttttgtatttttagtagatacagggtttcaccgtgctagccagaatggtctggatctcctgacctcatgatcagcccacttcagcctcccaaagtgctgggattacaggcatgacccactgcactgagtctagtgaaactaaatttttgtacaattttga---------------aacccaaactgggtatttcaaagttgtaatgactaagtatagtctctagggcaactaataataaaagaccttttaaa i calJac3.chr21 C 0 C 0 e canFam3.chr31 13787875 90 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e ponAbe2.chr21 16885804 11020 + 48394510 I a score=285560.000000 s hg38.chr21_KI270874v1_alt 27818 110 + 166743 atatagtaaaagaggcaataaggaaattgaagtgatatactagaaaatgtctattttt-aaaaaataaggc---------------agcaatggaggaatcgaggaacaaaa--------aagacatgaaacac s panTro4.chr21 3640538 110 + 32799110 atatagtaaaagaggcaataaagaaattgaagtgatatactagaaaatgtctattttt-aaaaaataaggc---------------agcaatggaggaatcgaggaacaaaa--------aagacatgaaacac i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4400412 110 + 32716333 atacagtaaaagaggcaataaggaaattagagtgatatactagaaaatgtctatttta-aaaaaataaggc---------------agtaatggaggaatcaaggaacaaaa--------aagacatgaaacac i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168514487 111 - 198365852 atatagtaaaagtggcaataaggaaattaaagtgacacactagaaaatgtctattttttaaaaaatagggc---------------agaaatggaggaatcaaggaacaaaa--------aagacatgaaacac i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162177359 111 - 192294377 atatagtaaaagtggcaataaggaaattaaagtgacacactagaaaatgtctattttttaaaaaatagggc---------------agaaatggaggaatcaaggaacaaaa--------aagacatgaaacac i macFas5.chr3 C 0 I 465 s papAnu2.chr3 150862110 111 - 180432695 atatagtaaaagtGGCAATAAGGAAATTACAGTGACACACtagaaaatgtctattttttaaaaaatagggc---------------aGAAATGGAGGAATCAAGgaacaaaa--------aagacatgaaaCAC i papAnu2.chr3 C 0 I 465 s chlSab2.chr2 14962828 111 - 90373283 atatagtaaaagtggcaataaggaaatttaagtgatacactagaaaatgtctatttttaaaaaaatagggc---------------agaaatggaggaatcaaggaacaaaa--------aagacatgaaacac i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21890014 110 + 50472720 atatagtaaaagaagcaacaaggaaattcaagtgatatactagataatgtctattttt-taaaaataaggc---------------agtaatagaggaattaaggaataaaa--------aatacaagaaacac i calJac3.chr21 C 0 C 0 s canFam3.chr31 13787965 133 + 39895921 atacaataaaagaagcaataagaaaattaaacttatatactagaaaatgtctttttaa-aaagaataaagcaaaaaaaaagaataaagcaatagggaaatagaggaataaaataaaacacaagacataagacgt i canFam3.chr31 I 90 I 5 e mm10.chr16 78093388 3140 + 98207768 I e ponAbe2.chr21 16885804 11020 + 48394510 I a score=13428.000000 s hg38.chr21_KI270874v1_alt 27928 4 + 166743 aaac s panTro4.chr21 3640648 4 + 32799110 aaac i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4400522 4 + 32716333 aaac i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168514598 4 - 198365852 aaac i rheMac3.chr3 C 0 I 16250 s macFas5.chr3 162177935 4 - 192294377 aaac i macFas5.chr3 I 465 C 0 s papAnu2.chr3 150862686 4 - 180432695 AAAC i papAnu2.chr3 I 465 C 0 s chlSab2.chr2 14962939 4 - 90373283 aaac i chlSab2.chr2 C 0 I 2345 s calJac3.chr21 21890124 4 + 50472720 aaac i calJac3.chr21 C 0 C 0 s canFam3.chr31 13788103 4 + 39895921 aaac i canFam3.chr31 I 5 C 0 e mm10.chr16 78093388 3140 + 98207768 I e ponAbe2.chr21 16885804 11020 + 48394510 I a score=403893.000000 s hg38.chr21_KI270874v1_alt 27932 280 + 166743 caataccaacatggtgaacataaatccaacctttccagtaaaagcattaaatgcaaatggatgaaacacttcattcaaaggacagagactgacaaaacaaataaaagcaaaaatgatctaattatatactatctacaagagacacacattagattcaaagacatataaattgaaattaaaggatgaaacagtgtatatcatgcaaatagtacacaaaagagaactcaagtagctatatcaacataaatcattcacacactcttcc-aaaaaaa----agatgaga s panTro4.chr21 3640652 280 + 32799110 caataccaacatggtgaacataaatccaacctttccagtaaaagcattaaatgcaaatggatgaaacacttcattcaaaggacaaagactgacaaaacaaataaaaggaaaaatgatctaattatatactatctacaagagacacacattagattcaaagacatataaattgaaattaaaggatgaaacagtgtatatcatgcaaatagtaaacaaaagggaactcaagtagctatatcaacataaatcattcacacactcttcc-aaaaaaa----agatgaga i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4400526 281 + 32716333 caataccaacatggtggacataaatccaaccttttcagtaaaagcattaaatgcaaatggatgaaacacttcattcaaaggacagagattgacaaaacaaataaaaggaaaaatgatataattatatactatctacaagagacacacattagattcaaagacatacaaattgatattaaaagatgaaccagtgtatatcatgcaaagagtaaacaaaagagaactcaagtagctatatcaacataaatcattcacaaactcttcc-aaaaaaat---agatgaga i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162177939 285 - 192294377 caataccaacatggtgaacataaatccaaccttttcagtaaaagcattaaatgcaaatggatgaaacacttcattcaaatgacggagattaatgaaataaataaaaggaaaaataattgaattatatactatctacaagagacacacattagattcaaagatgtataaggtaaaattcaaggatgaaacagtgtatatcatgcaaatagtaaataaaagagaactaaagtagctatatcaatataaatcattcacaaactcttccaaaaaaaatagaagatgaga i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150862690 284 - 180432695 CAATACCAACATGGTGAACATAAATCCAACCTTTTCAGTAAAAGCATTAAATGCAAATGGATGAAACACTTCATTCAAATGACAgagattaatgaaataaataaaaggaaaaataattgaattatatACTATCTACAAGAGACACACATTAGATTCAAAGATGTATAAGTTAAAATTCAAGGATGAAACAGTGTATATCATGCAAATAGTAAATAAAAGAGAACTAAAGTAGCTATATCAATGTAAATcattcacaaactcttcc-aaaaaaatagaagatgaga i papAnu2.chr3 C 0 C 0 s calJac3.chr21 21890128 284 + 50472720 caataccaacatggtgaacataaatcctacttttttagtataaacattaaatgcaaatggatgaaacactttattcgaaggacagagattgacaaaacaatgaaaagggaaaatgatctaattatatgccatctacaagaggcgtacattagattcaaaaatatataaattgaaattaaaggatgaaacaatgtatatcatgcaaatagtaagcaaaagagaactcaagtagctatatcaatataaatcctccacaaattgttcc-aaaaaaatagaagatgaga i calJac3.chr21 C 0 C 0 s canFam3.chr31 13788107 267 + 39895921 aaataccaacatggtggacataaatccaactttaccattaatgacattaaatacaaatgtaatacacactccaatcaaaagatagagtttggcaaaataaataaaaagaaaaattatccaactatatact-tctacaagagac--attttaaattcaaagacaaataaatcaaga---aataatgaacaaagacataccgtgtagacagtaaac--aagagagctggaatgaccatattaatataagaca-----aaatgcttaa-gagaaaa----aaatgaaa i canFam3.chr31 C 0 I 5522 e mm10.chr16 78093388 3140 + 98207768 I e rheMac3.chr3 168514602 16250 - 198365852 I e ponAbe2.chr21 16885804 11020 + 48394510 I e chlSab2.chr2 14962943 2345 - 90373283 I a score=1456249.000000 s hg38.chr21_KI270874v1_alt 28212 1266 + 166743 aacacttcccagt-----ttatttgaccagtattaccataataccagtccaaagaaatcataacccaaaaaaataaataaaatagactgtaaaagaaaaagtgaaaccagagacaaaaatgggcatattgtaatgat-aaacaggcaagccatctggaagacaaagcaattaaaaacatgtatgcactaatgaaagcacctcaaatacatgaag----------------------caaaaaaaaaaaccagtattgaatggagaaatgaacaattcaacaaaacaatttatgactttaatacctcactttcagtaatgggtagaaaaactaggcaaaatatcagccaggaaacagatgcttgaacaatactgtaaaccaactatatctaacagaaatatatagaatattgcccaacaacggcagaatacacattctacttaaatgtgcatggaacattctctgttataaaccacatgttaggtcataatcaagcctcaataaatataaaatgattaaaatcacacaaagtgtgtttctcaaccatgatggaatgaaattagaaaccacctaccaaaataaatttgggaaattcacaaatatgtagaaattaaacaacatccttgtaaaagaagggtcaaagaagaaatctc-aggcaaattacaaatattctgagatgaatgaaaacaaaaacaaaacatcaccaaaatttacaaatgctgctaaagtagtccttagaggaaaatttacagttgtaaatgcctgtgttataaagaaaagttcttaaatcaata--acagtcttctaccataggaaaccaaaa-aaaatata-----tataaaaaagagtaaactaaaaccaaagcaagcagaaggaaggaaataataaagatgcaagcagaaacaagtaaaatagataatacaaaaa---acaactttaaaaataaacaaaatcatatttgcttttttgaaaaagccaacgttggctgggtgtggtggctcatgcctgtaatcccaacactttggcaggcaaaagtgggtggatcacttgaggccaggagttcaagatcaacctggccaacatggtgaaaccccatctctactaaaatacaaaaattagctgggcgtggtggcacatg-cctgtaatcccagctattgggaaggctaaagcaggagaatcgcttgaaccagggaggcggaggttgcagtgagccaagattgcaccactgcactccagcctgggtgatacaatgaaactctgtcttggaaaa----------aaaaaaaaaaaaagaaaaagtcaacactggcaaac s panTro4.chr21 3640932 1280 + 32799110 aacacttcccagt-----ttatttgaccagtattaccataataccagtccaaagaaatcatatcccaaaaaaataaataaaatagactgtaaaagaaaaagtgaaaccagag--aaaaatgggcttattgtaatgat-aaacaggcaagccatctggaagacaaagcaattaaaaacatgtatgcactaacgaaaggacctcaaatccatgaagcaaaaaaaaaaaaaaaaaacaacaaaaaaaaaaaacagtattgaatggagaaatggacaattcaacaaaacaatttatgactttaatacctcactttcagtaatgggtagaaaaactaggcaaaatatcagccaggaaacagatgcttgaacaatactgtaaaccaactatatctaacagaaatatatagaatattgcccaacaacggcagaatacacattctacttaagtgtgcatggaacattctctgttatagaccacatgttaggtcataatcaagcctcaataaatataaaatgattaaaatcacacaaagtgtgtttctcaaccacgatggaatgaaattagaaaccagctaccaaaataaatttgggaaattcacaaatatgtagaaattaaacaacatccttgtaaaagaagggtcaaagaagaaatctc-aggcaaattacaaatattctgagatgaatgaaaacaa----aaaacatcaccaaaatttacaaatgctgctaaagtagtccttagaggaaaatttacagttgtaaatgcctgtgttataaagaaaagttcttaaatcaata--acagtcttctaccacaggaaaccaaaataaaaaata------aaaaaaaagagtaaactaaaaccaaagcaagcagaaggaaggaaataataaagatgcaagcagaaacaagtaaaatagataatacaaaaa---acaactttaaaaataaacaaaatcatatttgcttttttgaaaaagccaacattggctgggtgtggtggctcacgcctgtaatcccaacactttggcaggcaaaagtgtgtggatcacttgaggccaggagttcaagatcaacctggccaacatggtgaaaccccatctctactaaaatacaaaaattagctgggcgtggtggcacatg-cctgtaatcccagctatttggaaggctaaagcaggagaatcgcttgaaccagggaggcggaggttgcagtgagccaatattgcaccactgcactccagcctgggtgatacaatgaaactctgtcttg--aaa----------aaaaaaaaaaaaagaaaaagtcaacactggcaaac i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4400807 1255 + 32716333 aacacttcccagt-----ttatctgaccagtattaccataacaccagtccaaagaaatcataaccccaaaaaataaataaaacagactgtaaaagaaaaagtgaaaccagagacaaaaatgggcatattgtaatgataaaacaggcaagccatcaggaagacaaagcaattaaaaacatgtatgcactaacgaaagaacctcaaatacatgaagcc--------------------aaaaaaaaaaaaacagtattgaatggagaaatggacaattcaacaaaacaatttatgactttaatacctcactttcagtaatgggtagaaaaactaggcaaaatatcagccaggaaacagatgcttgaacaatactgtaaaccaactatatctaacagaaatatatagaatattgcccaacaatggcagaatacacattctacttaagtatgcatggaacattctctattatagaccacatgttaggtcataatcaagcctcaataaatataaaatgattaaaatcatacaaagtgtgtttctcaaccatgatgaaatgaaattagaaaccagctaccaaaataaatttgggaaatttacaaatatgtagaaattaaacaacatccttgtaaaagaagggtcaaagaagaaatctc-aggcaaattgtaaatattttgagatgaatgaaaacaaaaacaaaacatcatcaaaatttacaaatgctgctgaagcagtccttagaggaaaatttatagttgtaaatgcctgtattataaagaaaagttcttaaatcaataacacagtattctaccataggaaaccaa---agaaaata--------aaaaaagagtaaactaaaaccaaagcaagcagaaggaaggaaataataaagattcaagcagaaacaagtaaaatagataatacaaaaa---acaactttaaaaataaacaaaatcatatttgcttatttgaaaaagtcaacagtggttgggtgtggtggctcatgcctgtaatcccaacattttggcaggccaaggtgggtggatcacttgaggccaggagttcaagaccaacctggccaacatggtgaaaccccatctctactaaaatacaaaaattagctgggcatggtggcatatg-cctgtaatcccagctatttggaaggctaaagcaggagaattgcttgaaccagggaggaggaggttgcagtgagccaagattgcgccaccgcactccagcctgggtgatacaatgaaactctgtcttg--------------------aaaaaaaaaaaaaagtcaaca-tgacaaac i nomLeu3.chr25 C 0 I 304 s macFas5.chr3 162178224 1256 - 192294377 aacacttcccagtttatcttatttgaccagtattaccataataccagtccaaagaaatcataaCCCCAAAAAAT--ataaaatagattgtaaaagaaaaagtgaaaccagagaccaaaatgggcatactgtagtgataaaacagacaagccatcaggaagacaaaacaattaaaaacatgtatgcactaacaaaaggacctcaaatacatgaag----------------------caaaaaaacaa--cagtattgaatggagaaatggacaattcaacaaaacaatttatgactttaatacctcactttcagtaatgggtagaaaaactaggaaaaatatcagccaggaaacagatgcttgaacaatactgtaaaccaactatatctaacagaaatatgtagaatattgcccaacgatggcagaatacacgttctacttaagtatgtctggaacatgctctattatagaccacatgttaggtcatagtcaagcctcaataaatataaaatgattaaaatcatacaaagtgtgtttctcaaccacaatggaatgaaatttaaaaccacctaccaaaataaatttgggaaatttacaaatatgtaaaaattaaacaacatgcttgtaaaagaagggtcaaagaataaatctc-aggcaaattataaatatttttagatgaatgaaagcaaaaacaaaacatcaccaaaatttacaaatgctgctaaagcagtccttagaggaaaatttacagttgtaaatgcctgtgttataaaggaaagttcttaaatcaaaagcacagtcttctaccataggaaaccaa---agaaaataaaaagagagagagagaggaaactaaaaccaaagcaagcagaatgaaggaaataataaagattcaagcataaacaagtaaaatagataatacaaaaa---acaactttaaaaataaacaaaatcatatttgcttatttgaaaaagtcagcattgtctggctgtggtggctcctgcctgtaatctcaacactttggcaggccaagataggtggatcacttgaggccaggagtttgagaccaaactggccaatata---------catctctactaaaatacaaaaattagctgggcgtggtggcacgtg-cctataatcccagctatttggaaggctgaagcaggagaatcgcttgaaccagggaggtggaagttgcagtgagccaagattgcaccactgcactccagcctgggtgacacaatgaaactctgtcctg------------------taaaaataaaggaaaagtcaacaatggcaaac i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150862974 1257 - 180432695 AACACTTCCCAGTTTATCTTATTTGACCAGTATTACCATAATACCAGTCCAAagaaatcataacccccaaaaat--ataaaatagactgtaaaagaaaaagtgaaaccagagacaaaaaTGGGCATACTGTAATGATAAAACAGACAAGCCATCAGGaagacaaaacaattaaaaacatgtaTGCACTAACAAAAGGACCtcaaatacatgaag----------------------caaaaaaacAA--CAGTATTGAATAGAGAAATGGACAATTCAACAAAACAATTTATGACTTTAATACCTCACTTTCAGTAATGGGtagaaaaactaggaaaaatatCAGCCAGGAAACAGATGCTTGAACAATAATGTAAACCAACTATATCTAACAGAAATATATAGAATATTGCCCAACGatggcagaatacacattctactTAAGTATGCCTGGAACATTCTCTATTATAGACCACATGTTAGGTCATAGTCAAgcctcaataaatataaaatgattaaaatcatACGAAGTGTGTTTCtcaaccacaatggaatgaaattaaaaatcacctaccaaaataaatttgggaaatttacaaatatgtaaaaattaaacaacatgcttgtAAAAGAAGGGTCAAAGAATAAATCTC-AggcaaattataaatatgtttagatgaatgaaagcaaaaacaaaacatcgCCAAAATTTACAAATGCTGCTAAAGCAGtccttagaggaaaatttacagtTGTAAATGCCTGTGTTATAAAGGAAAGTTCTTAAATCAAAAGCACAGTCTTCTACCATaggaaaccaa---agaaaataaaaagagagagagagaggaaactaaaaccaaagcaagcagaatgaaggaaataataaagattcaagcataaacaagtaaaatagataatacaaaaa---acaactttaaaaataaacaaaatcatatttgcttatttgaaaaaGTCAGCATTGTCTGgctgtggtggctcctgcctgtaatctcaacactttggcaggccaagataggtggatcacttgaggccaggagttcgagaccaaactggccaatata---------catctctactaaaatacaaaaattagctgggcgtggtggcacgtgccctataatcccacctatttggaaggctgaagcaggagaatcgcttgaaccagggaggtggaagttgcagtgagccaagattgcaccactgcactccagcctgggtgacacaatgaaaCTCTGTCctg------------------taaaaataaaggaaaagtcaACAAtggcaaac i papAnu2.chr3 C 0 C 0 s calJac3.chr21 21890412 1261 + 50472720 aacacttcccagtttattttatttgaccaatatt---ataataccagtccaaagaaaccataatccaaaaaaatagataggatagactttaaaagaagaagtgaaaccagagacaaaaatgggcatattataatgatgaaacaggcaagccatcaggaaaacaaagcaagtaaaaatacatatgcactgatgaaggcacctcaaatacatgaag----------------------caaaaaacaa---tagtattgggtggagaaatggacaattcaacaaaacaatttatgactttaatacctcactttcagtaacaggtagaaa-------------atcagccaagaaacagatgcttgaacaatactgtaaaacaactatgtctaatagaaatatatagaatatttcccaacactggcagaatacacattatacttaagtgtgcatagaacattctccattataa---tcacgttaggtcataatgaagcctcaataaatataaaatgattaaaatcacacaaagtgtgtttctcaaccatgaaagaatgaaattagaaaacagctaccaaaagaaatttgagaaatttacaaatttgtagaaatta---aacatccttgtaaaagaagggccaaagaagaaatctcaaggcaaattataaatattttgagatgagtgaaaacaaaaacaaagcatcaccaaaatttataaatgctgctaaagcagtacttagagaaaaatttatagttgtaaatgcctgtattataaaggaaagttcttaaatcaataatacagtcttccaccataggaaacca----aaaaaagagagagagagaaaaagagtatactaaaaccaaaacaagcag-aggaaggaaataataaagattggagcagaagcaagtaaaatagataatacaaaaaaagaaaactttaaaaataaacaaaaccatatttgcttctttgaaaaatgcaacattaggcaggcacagtggctcacacctgtgatcccagcacgttggcaggtcaaggtg---ggatcacttgaggccaggagttcaagaccagcctggccaacacggttaaaccccttctctactaaaatacaaaaattagcctggcatggtggcaccta-cctataaacctagctatttggaaagctaaggcaggagactcacttgaacctgggaggcggaggttgcagtgagctgggatcaccccactgcactccagcctgagtgacagaatgagactctgtcttgaaaaaaaaaaaagagaaagaaagaaagagaaaaagtcaacactggcaaac i calJac3.chr21 C 0 C 0 e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e rheMac3.chr3 168514602 16250 - 198365852 I e ponAbe2.chr21 16885804 11020 + 48394510 I e chlSab2.chr2 14962943 2345 - 90373283 I a score=147765.000000 s hg38.chr21_KI270874v1_alt 29478 194 + 166743 ctttagctagagtgaccatgagaaaaata---gaagattcaagttattaaaatcaggagtg-aaaaagggacttc--------actgccaaacttatagaacttttatttttaaagattataagagaatgatttgaacaattgtaagctaaaaaaaatttgataacctagacgaaatggacaaatttctgaaaagatgcaaaattg s panTro4.chr21 3642212 194 + 32799110 ctttagctatagtgaccatgagaaaaata---gaagattcaagttattaaaatcaggagtg-aaaaagggacttc--------actgccaaacttatagaacttttatttttaaagattatacgagaatgatttgaacaattgtaagctaaaaaaaatttgataacctagacgaaatggacaaatttctgaaaagatgcaaaattg i panTro4.chr21 C 0 C 0 s macFas5.chr3 162179480 192 - 192294377 ctttagctagagtgacaatgagaaaaata---gaagattcaagttattaaaatcaggagtgaaaaaagggacatc--------actgccaaacttatagaactttcattttgaaagattataagaaaatgatttgaacaattgtatgc---aaaaattttgacaacctagatgaaatggacaaatttctgaaaagatgcaaaactg i macFas5.chr3 C 0 I 68 s papAnu2.chr3 150864231 192 - 180432695 ctttagctagagtgacaatgagaaaaata---gaagatTCAAGTTATTAAAATCAGGAGTGAAAAAAGGGACATC--------ACTGCCAAACTTATAGAACTTTCATTTTGAAAGATTATAAGAAAATGATTTGAACAATTGTATGC---AAAAATTTTgacaacctagatgaaatggacaaatttctgaAAAGATGCAAAACTG i papAnu2.chr3 C 0 I 68 s calJac3.chr21 21891673 205 + 50472720 ctttagctagattgacaatgaggaaaaaaaatgaagattcaaattattaaaatcaaaagtg-aaaaagggacatctttttatttttgacaaacttacagaacttttattttgaaagaatataagagaatgatttgaacaatcgtatgcaaaaaaaaattggataacctagatgaaatggacaaactcctgaaaagatgcaaaactg i calJac3.chr21 C 0 C 0 e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e rheMac3.chr3 168514602 16250 - 198365852 I e ponAbe2.chr21 16885804 11020 + 48394510 I e chlSab2.chr2 14962943 2345 - 90373283 I e nomLeu3.chr25 4402062 304 + 32716333 I a score=13001.000000 s hg38.chr21_KI270874v1_alt 29672 13 + 166743 attctaaaagaaa s panTro4.chr21 3642406 13 + 32799110 attctaaaagaaa i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4402366 13 + 32716333 attttaaaatgaa i nomLeu3.chr25 I 304 C 0 s macFas5.chr3 162179740 13 - 192294377 attccataagaaa i macFas5.chr3 I 68 I 66 s papAnu2.chr3 150864491 13 - 180432695 attccataagaAA i papAnu2.chr3 I 68 I 66 s calJac3.chr21 21891878 13 + 50472720 attctaaaagaaa i calJac3.chr21 C 0 C 0 e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e rheMac3.chr3 168514602 16250 - 198365852 I e ponAbe2.chr21 16885804 11020 + 48394510 I e chlSab2.chr2 14962943 2345 - 90373283 I a score=1400.000000 s hg38.chr21_KI270874v1_alt 29685 12 + 166743 cagaaatctgag s panTro4.chr21 3642419 12 + 32799110 cagaaatctgag i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4402379 8 + 32716333 ttaacatc---- i nomLeu3.chr25 C 0 C 0 s calJac3.chr21 21891891 12 + 50472720 gaaaaatctgag i calJac3.chr21 C 0 I 10705 e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e rheMac3.chr3 168514602 16250 - 198365852 I e ponAbe2.chr21 16885804 11020 + 48394510 I e chlSab2.chr2 14962943 2345 - 90373283 I e macFas5.chr3 162179753 66 - 192294377 I e papAnu2.chr3 150864504 66 - 180432695 I a score=646.000000 s hg38.chr21_KI270874v1_alt 29697 5 + 166743 tagat s panTro4.chr21 3642431 5 + 32799110 tagat i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4402387 3 + 32716333 --aat i nomLeu3.chr25 C 0 C 0 e calJac3.chr21 21891903 10705 + 50472720 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e rheMac3.chr3 168514602 16250 - 198365852 I e ponAbe2.chr21 16885804 11020 + 48394510 I e chlSab2.chr2 14962943 2345 - 90373283 I e macFas5.chr3 162179753 66 - 192294377 I e papAnu2.chr3 150864504 66 - 180432695 I a score=1910.000000 s hg38.chr21_KI270874v1_alt 29702 2 + 166743 ct s panTro4.chr21 3642436 2 + 32799110 ct i panTro4.chr21 C 0 I 118 s nomLeu3.chr25 4402390 2 + 32716333 ct i nomLeu3.chr25 C 0 I 1 s macFas5.chr3 162179819 2 - 192294377 ct i macFas5.chr3 I 66 C 0 s papAnu2.chr3 150864570 2 - 180432695 ct i papAnu2.chr3 I 66 C 0 e calJac3.chr21 21891903 10705 + 50472720 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e rheMac3.chr3 168514602 16250 - 198365852 I e ponAbe2.chr21 16885804 11020 + 48394510 I e chlSab2.chr2 14962943 2345 - 90373283 I a score=180.000000 s hg38.chr21_KI270874v1_alt 29704 1 + 166743 c s nomLeu3.chr25 4402393 1 + 32716333 t i nomLeu3.chr25 I 1 C 0 s macFas5.chr3 162179821 1 - 192294377 t i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150864572 1 - 180432695 t i papAnu2.chr3 C 0 C 0 e calJac3.chr21 21891903 10705 + 50472720 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e rheMac3.chr3 168514602 16250 - 198365852 I e ponAbe2.chr21 16885804 11020 + 48394510 I e chlSab2.chr2 14962943 2345 - 90373283 I e panTro4.chr21 3642438 118 + 32799110 I a score=5328146.000000 s hg38.chr21_KI270874v1_alt 29705 4231 + 166743 cacaaactcttccaaaaaaaaa----agatgagaaaacacttcccattttattttatttgaccagtattaccataatactaaaccaaagaaatcacaacaacaaagaaacccacagaccaatgtttcttatgaacattaatgcaaaatcttcaaatgccagcaaaccaaagtgacacttaaaaaaagttatataccatgactaactgggatttagctcaacggtacaaatttgccctaatatatgaaaatcaactaatgtgatacaccgtattaacacgatgaaaactaaaagcacatgatcatttctatagataaagtaaaatcctctgacataatgtaacattgctttgtgataaaaacactcattaaactagaaacagaaggaaactttttcaactgcataaaggccatctacaaaataacaacagctaaaattatatctaattgtgaaagattgaatgctttccttctaaaatcaagaaatagaaataaaatcatccctattcaggatcttgcatttagaaaatgctaagaaattgacgcaaaaaattattaaaactagtaagtatagcaaagttgcagaatacaagctcaatatacaaagattaattgtacttttgtacatcactaatatataatctgaataagaaattaagaaaacaattatatttacaaaagtatcagaataaaataggaataaatttaacaaaaaacatggatcatttgtacaccagaaactatacaacataactgag-aaaacatatggaagacaggaggcaggactcacttgtagctcccactcagattaacagaaccacatgtggagactcacattatgaacttttgctccaagacatactgcaggaacatactgggaaaacaaacaaacaaac--------aaaagattacagaccttttgaaagaagcagcttcctgctgcaaattctgtgatgtgagacagttgaaaaactcagcgcccaaagtgtgagagggagaaagcccacatctgaacacagattctccctggggaacctgaaaatcaagatcacaggagaaagacttaaccttacctaaagctgaaacaaatttagagagccaagtgaaatataaaagcagaagaagcagtgagaagagctggtccaacaggactcttggtccccagggaagctatttctgacttcatctcacagggttcctttgggaggactgccagtagacctggggaaggaccacaggaagcagaaaacttcccggtgaactctttaataattttgaactagcacgaaatttccagggcagaattggtgggg-ggtgggggcggtgaatgtgaagagcaggtacaagcacaaaagacatggcaggcagggatggaaaaggcctgaaagcccagcttgctttctcagtggggaggtttgtagtctgggacaataactcagccctgctcactggccgtctggatgtaaactcggtgctgttgttggggcatggtgaaagtgagcttttctggctacataagagctgggagaggcagatcactgctggcattcccccacttctctggtgacctgtatgatgcagcagaggaagccataatctcccCATATTACCTCTCTgaagaaagaacttaagagctcaaagacaaagcattcaaattaacctaatccaacaaagacaaagaaaa-aaagtttgaaaaacatgaacaaagcctccaagaagtttgggattatgttaaacaaccaaaccta--aataattggtgctcatgagaaagatgataaatctaaaaatttggaaaacatatttgagagaataatcaaggaatacttccctggcctttctagagatctagacatacaagtacaagaagctcaaagaacacctggggaattcatcacaaagagatctttacctaggtacatagtcatcaggtaatctaaagtcaaaacaaaagaaacaatcttgagagctgtgaggcaaaagcatcaggtagcctgtaaaggaaaacctatcagacaaacaacaga-ttttttagcagaaaccctacaagctagaagtgattggggtcctatctttatcctcctt-----------------taaaaaaaaaa-------attatcagccaagaatattgtatccagcaaaattaagcttcattaatgagtaaaagataaagtc-tttttcaaacaaacaaatgctgacagcatttgtcactgccaaatgaatactaaaagaattactaaaaggggttccaaattttgaaacaaattctcaaaatacaccaaaatagaaacttcttaaggttcttaaagcacaaatctcacagggcctgtaaaacaataacacaata---aaaaaaaaaaaaaaaaaacaaggtattcaggcaacaaatggcatgatgaatagaaaagtacctcacatctcaataccaacattgaatataaatggtctaatcgctcaacttaagagatacagaatggcagaatggataaaaattcaccaagcaagattctgctgtcttcaagaaactcacctaacataaaaggatttacataaacttaaggttaaagggtagaaaaatatattccatgcaaatgaacaccaagagccaacagaagtatctattcttatattagacaaaacagactttaaagaaagagtagttaaaaagacaaagatgtatattatgtaatgataacaggactagtccaacagaaaaatatcataattctaaatatatatgcaccttacagtggagattccaaatgtgaaaaacaattactactagacccaagaaatgagatagatagcatataata--------atagtgggga-ctttagtaccccactgactgaactctcatcaagacagaaagtcaacaaagaaacaatggacttaaactatatccttcaacaaatggacttaacagatatttatagaacattgtatacccaatgattgcagaatatacattctattcattagcacacagaacattctccaagatagaccatacgatacaccacaaaacaagtctcaataaatttaagaaaatcaaaattataccaagaactctttcagaccacagtggaataaaattggaaatcaactccaaagggaaccctcaaaaacatgcaaatacaaggaaattaaatagtctgctcctaaatgatccttgggtcaacaatacaatcaagacagaaattaaaaatttgtttgaactgaatgataataatgacacaacctaacaaaacctcagggatagagcaaaagaggtgctaaaaggaaagttcatagcattaaatgtctacatcaaaaagtctgaaagaacacacatatgccatctaaggtcatgccttgaggaactatagaaacaagaacaagc------caaacccaaacccaaaccctacagaagaaaagaaataacaaagatcagagcagaactaaatgaaactgaaacaaaaataaatacaaaagataaatgaaagaaaaacctggttcattgaaaagataaac-aaaactaatagaacattagtgagattaaccaagacaagaagagagaagatccaaataagctcaattagaaacaaaacagaaaataccacagaaatacaaaagatcattcaaggctactataaacacttttatgtgcatgaactgaaaaacctagaggaaatggataaattcctagaaatataaaaccctcctagattaaaacagg----aatagaaactctgaacagaccaaaaacaaatagcaagattgaaatggtaatttaaaaattgccaacaaaaa--aaaaatctaggaccagatggattcacagctgaattctatcagacattca---aagatttgataccaatcctattgaaactatttcaaacgatagagaaagagggactctccct-aattatgttatggagccagtgtcaccctactaccaaaaccaggaaataacataacaaaaaaagaaaactagagacaaacgtctctgatgaatgttaatgcaaaaattctcaacaaaatattagctaaccaaatccaacagcatatcaaaaagataatccaccatg-atcaagttggtttcataccagcgattcaaagatggtttaatatacctaaatcaataaacatgatacaccacataaacagaatcaaaaag--aaaaatcacatgatcatctcaatagattcagaaaagcatttgataaaatccaacattgctttatgattaaaactctcagtaaaactggtgtagaagggacataccttaaagtaataaca s panTro4.chr21 3642556 4233 + 32799110 cacaaactcttccaaaaaaaaatagaagatgagaaaacacttcccattttattttatttgaccagtattaccataatactaaaccaaagaaatcacaacaacaaagaaacccacagaccaatgtttcttatgaacattaatgcaaaatcttcaaatgccagcaaaccaaagtgacgcttaaaaaaagttatataccatgactaactgggatttagctcaacggtacaaatttgccctaatatatgaaaatcaactaatgtgatacaccgtattaacacaatgaaaactaaaagcacatgatcatttctatagataaagtaaaatcctctgacataacgtaacattgcttcgtgataaaaacactcattaaactagaaacagaaggaaactttttcaactgcataaaggccatctacaaaataacaacagctaaaattatatctaattgtgaaagattgaatgctttccttctaaaatcaagaaatagaaataaaatcatccctattcaggttcttgcatttagaaaatgctaagaaattgacgcaaaaaattattaaaactagtaagtatagcaaagttgcagaatacaagctcaatacacaaagattaattgtatttttgtacattactaatatataatctgaataagaaattaagaaaacaattatatttacaaaagtatcggaataaaataggaataaatttaacaaaaaacatggatcatttgtacaccagaaactatacaacataactgag-aaaacatatggaagacaggaggcaggactcacttgtagctcccactcagattaacagaaccacatgtggagactcacattatgaacttttgctccaagacatactgcaggaacatactgggaaaacaaacaaacaaac--------aaaagattacagaccctttgaaagaagcagcttcctgctgcaaattctgtgatgtgagacagttgaaaaactcagcgcccaaagtgtgagagggagaaagcccacatctgaacacagattctccctggggaacctgaaaatcaagatcacaggagaaagacttaaccttacctaaagctgaaacaaatttagagagccaagtgaaatataaaagcagaagaagcagtgagaagagctggtccaacaggactcttggtccccagggaagctatttctgacttcatctcacggggttcctttgggaggactgccagtagacctggggaaggaccacaggaagcagaaaacttcccggtgaactctttaataattttgaactagcacgaaatttccagggcagaattggtggggaggtgggggcggtgaatgcgaagagcaggtacaagcacaaaagacatggcaggcagggatggaaaaggcctgaaagcccagcttgctttctcagtggggaggtttgtagtctgggacaataactcagccctgctcactgaccgtctggatgtaaactcgttgctgttgttggggcatggtgaaagtgagcttttctggctacataagagctgggagaggcagatcactgctggcattcccccacttctctggtgacctgtatgatgcagcagaggaagccataatctcccCATATTCCCTCTCTgaagaaagaacttaagagctcaaagacaaagcattcaaattaacctaatccaacaaagacaaagaaaa-aaagtttgaaaaacatgaacaaagcctccaagaagtttgggattatgttaaacaaccaaaccta--aataattggtgctcatgagaaagatgataaatctaaaagtttggaaaacatatttgagagaataatcaaggaatacttccctggcctttctagagatctagacatacaagtacaagaagctcaaagaacacctggggaattcatcacaaagagatctttacctaggtacatagtcatcaggtaatctaaagtcaaaacaaaagaaacaatcttgagagctgtgaggcaaaagcatcaggtagcctgtaaaggaaaacctatcagacaaaaaacaga-ttttttagcagaaaccctacaagctagaagtgattggggtcctatctttatcctcctt-----------------taaaaaaaaaa--------ttatcagccaagaatattgtatccagcaaaattaagcttcattaatgagtaaaagataaagtc-tttttcaaacaaacaaatgctgagagcatttgtcactgccaaatgaatactaaaagaattactaaaaggagttccaaattttgaaacaaattctcaaaatacaccaaaatagaaacttcttaaggttcttaaagcacaaatctcacagggcctgtaaaacaataacacaatg---aaaaaaaaaaaaaa----caaggtattcaggcaacaaatggcatgatgaatagaaaagtatctcacatctcaataccaacattgaatataaatggtctaattgctcaatttaagagacacagaatggcagaatggataaaaattcaccaagcaagattctgctgtcttcaagaaactcacctaacataaaaggatttacataaacttaaggttaaagggtagaaaaatatattccatgcaaatgaacaccaagagccaacagaagtatctattcttatattagacaaaacagactttaaagaaagagtagttaaaaagacaaagatgtatattatgtaatgataacaggactagtccaacagaaaaatatcataattctaaatatatatgcaccttacagtggagattccaaatgtgaaaaacaattactactagacccaagaaatgagatagatagcatataata--------atagtgggga-ctttagtaccccactgactgaactctcatcaagacagaaagtcaacaaagaaacaatggacttaaactatatccttcaacaaatggacttaacagatattgacagaacattgtatacccaatgattgcagaatatacattctattcattagcacatagaacattctccaagatagaccatacgatacaccacaaaacaagtctcaataaatttaagaaaatcaaaattataccaagtactctttcagaccacagtggaataaaattggaaatcaactccaaagggaaccctcaaaaacatgcaaatacaaggaaattaaatagtctgctcctaaatgatccttgggtcaacaatacaatcaagacagaaattaaaaatttgtttgaactgaatgataataatgacacaacctaacaaaacctcagggatagagcaaaagaggtgctaaaaggaaagttcatagcattaaatgtctacatcaaaaagtctgaaagaacacacatatgcaatctaaggtcatgccttgaggaactatagaaacaagaactaac------caaacccaaacccaaaccctacagaagaaaagaaataacaaagatcagagcagaactaaatgaaactgaaacaaaaataaatacaaaagataaatgaaagaaaaagctggttcattgaaaagataaac-aaaactaatagaacattaatgagattaaccaagacaagaagagagaagatccaaataagctcaattagaaacaaaacaggaaataccacagaaatacaaaagatcgttcaaggctactataaacacttttatgtgcatgaactgaaaaacctagaggaaatggataaattcctggaaatataaaaccctcctagattaaaacagg----aatagaaactctgaacagaccaaaaacaaatagcaagattgaaatggtaatttaaaaattgccaacaacaacaaaaaatctaggaccagatggattcacagctgaattctatcagacattca---aagattcgataccaatcctattgaaactattccaaacgatagagaaagagggactctccct-aattatgttatagagccagtgtcaccctactaccaaaaccaggaaagaacataacaaaaaaagaaaactaaagacaaacgtctctgatgaatgttaatgcaaaaattctcaacaaaatattagctaaccaaatccaacagcatatcaaaaagataatccaccatg-atcaagttggtttcataccagggattcaaagatggtttaatatacataaatcaataaacatgatacaccacataaaccgaatcaaaaag--aaaaatcacatgatcatctcaatagattcagaaaagcatttgataaaatccaacattgctttatgattaaaactctcagtaaaactggtgtagaagggacataccttaaagtaataaca i panTro4.chr21 I 118 C 0 s nomLeu3.chr25 4402394 4222 + 32716333 cacaaactcttccaaaaaaaaatagaagatgagaaaacacttcccattttattttatttgaccagtattaccataataccaaaccaaagaaatcacaaaaacaaagaaacccacagaccaatgtttcttatgaacattaatgcaaaatcttcaaatgccagcaaaccaaagtgacacttacaaaaagttacataacatgactaactggaatttatctcaacagtacaaatttggcttaataaatgaaaatcaactaatgtgatacaccatactaacacgatcaaaacaaaaagcacgtgatcatttct----ataaagtaaaatcctctgacataacctaacattgcttcatgataaaaacactcattaaactagaaacagaaggaaactttttcaactgcataaaggccatctgcaaaacaacaacagctaaaattatgtctaattgtgaaagattgaatgctttcgttctaaaatcaagaaatagaaa-aaaatcattcctattcaggatcttgtatttagaaaatactaagaaattgacac-aaaaattattaaaacaaataagtacagcaaagttgcagaatacaagctcaatatacaaagattaattgtatttttgtacattacgaacatataatctgaataagaaattaaggaaacaattatatttacaaaagtatcagaataaaataggaataaatttaacaaaaaacatggatcacttgtacaccagaaactataaaacataactgag-acaacatatggaagacaggaggcaggactcacttgcagctcccactcagattaacagaacaacatgtggacactcacattatgaacttttgctccaagacctactgcaggaacatactggga----aaacaaacaaac--------aaaaaattacagaccctttgaaagaagaatcttcctgctgcaaattc-----tgtgagacagttgaaaaactgagtgcccaaagtgtgagacggagaaagtccatatctgaacacaaattctccctggggaacctgaaaaacaagatcacaggagaaagatttaaccttacctaaagctgaaacaaatttagagagccaagtgaaatataaaagtagaagaagcagtgggaagagctggtccagcaggactcctggtccccagggaagctatttctgacttcatctcacaggggtcctttgggaggactgccagtagaattggggaaggaccacaggatgaagaaaacttccggatgaactttttaataattttgacctggcacaaaatttctggggcagaattggtgggg-ggtggggacggtgcatgcaaagagcaggtacaagcacagaagacatggcaggcagggatggaaaaggcctgaaagcctggcttgctttctcagtggggaggtttgtagcctggggcaataactcagccctgctcactggctgtctggatgtaaactcagtgctgttggtggggcatggtgaaagtgagtctttctggctacataagagctgggagaggcaggccactgctggcattcccccacttccctggtgacctgtacgatgcagcagaggaagccataatctcccCATATTCCCTCTCTgaagaaagaacttaagagctcaaagacaaagcattcaaattaacctaatccaacaaagacaaagaaaa-aaagtttgaaaaacatgaacaaagcctccaagaagtttgggattatgttaaacaaccaaaccta--aataattggtgttcatgagaaacatgataaatctaaaagtttggaaaacatatttgagagaataatcaaggaatacttccctggcctttctagagatctaaacatacaagtacaagaagctcaaagaacacccagatgattcatcacaaaaagatctttacctaggcacatagtcatcaggtaatctaaagtcaaaacgaaagaaacaatcttgagagctgtgaggcaaaagcatcaggtagcctgtaaaggaaaacctatcagacaaacagcaga-ttttttagcagaaaccctacaagctagaggggattgagatcctatctttatcctcctt-----------------taaaaaaaaaaaaaacaaattatcagccaagaatattgtatccagcaaaactaagcttcattaatgagtgaaagataaagtc-tttttcaaacaaacaaatgctgagaggatttgtcactaccaaatgaatactaaaagaattactaaaaggagttccaaattttgaaaaaaattctcaaaatacaccaaaatagaaactttttaaggttcttaaagcacaaatctcacagggcctataaaacaataacacaatg---aaaaaaaaa---------caaggtgttcaggcaacaaatggcatgatgaatagaaaagtacctcacatctcaataccaacattgaatataaatggcctaattgctcaacttaagagacacagaatggcagaatggataaaaattcaccaagcaaggttctgctgtcttcaagaaactcacctaacataaaaggatttacataaacttaaggttaaagggtagaaaaatatattccatgcaaatgaacaccaagagccaatagaagtatctattcttatattagacaaaacagactttaaagaaagagtagttaaaaagacaaagatgtacattatgtaatgataacaggactagtccaacaggaaaatatcataattctaaatatatatgcaccttacagtggagattccaaatgtgaaaaacaattactactagacccaagaaatgagataaatagcatataata--------atactgggga-ctttagtaccccactgactgaactctcatcaagacagaaagtcaacaaagaaacaatggacttaaactatatccttcaacaaatggacttaacagatatttacagaacattctatgtgcaatgattgcagaatatacattctattcgtcagcacatagaacattctccaagatagaccacatgatacaccacaaaacaagtctcaataaatttaagaaaatcaaaattttaccaagtactctttcagaccacagtggaataaaattggaaatcaactccaaagggaaccctcaaaaacatgcaaatacaagaaaattaaatagtctgctcctaaatgatccttgggtcaacaatacaatcaagacggaaattaaaaatttgtttgaactgaatgatagtaatgacacaacctaacaaaacctcagggatagagcaaaagaggtgctaaaaggaaagttcatagcattaaatgtctacatcaaaaagtctgaaagaacacacatatgcaatctaaggtcatgccttgaggaactatggaaacaagaacaaat------caaacccaaacccaaaccctacagaagaaaagaaataacaaagatcagagcagaactaaatgaaattgaaacaaaaataaatacaaaagataaatgaaagaaaaagctggttcattgaaaagataaac-aaaactaacagaacattagtgagattaaccaagac-agaagagagcagatccaaataagctcaattagaaacaaaacagg-aacaccacagaaatacaaaagatcactcaaggctactataaacacttttatgtgcatgaactgaaaaacctagaggaaatggataaattcctggaaatataaaaccctcctagattaacacaggaagaaatagaaactctgaacagaccaataacaaatagcaagattgaaatggtaatttaaaaattgccaacaaaa---aaaagtctacgaccagatggattcacagctgaattctatcagacattcaaagaagatttgataccaattctactgaaactattccaaaagatagagaaagagggactctccct-aattatgttatggagccagtgtcaccctactaccaaaaccaggaaagaacataacaaaaaaagaaaactagagacaaacgtctctgatgaacgttaatgcgaaaattctcaacaaaatattagctaaccaaatccaacagcatatcaaaaagacaatccaccatg-atcaagttggtttcataccagggattcaaaaatggtttaaaatacataaatcaataaacatgatacaccacataaatagaatcaaaaag--aaaaatcacatgatcatctcaatagacgcagaaaagcattcgataaaatccaacattgctttatgattaaaactctcagtaaaactggtgtagaagggacataccttaaagtaataaaa i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162179822 4235 - 192294377 cacaaactcttccaaaaaaaaatagaagatgagaaaacacttcccattttattttatttgaccagtattaccataataccaaaccaaagaaatcataacaacaaagaaacccacaaaccaatgtttcttatgtatattaatgcaaaatcttcaaatgtcagcaaaccaaagtgacactttaaaaaaattatataccatgactaactgggatttatctcaatagtacaaatttgacttgatatatgaaaatcagctaatgtgatacaccatattagcgcaatgaaaactaaaagcacatgatcatttctatagataaagtaaaatcctctgacataacccaacactgcttcatgataaaaacactcatcaaactagaaacagaaggaaactttttcaactacgtaaaggccatctgcaaaataacagcagctaaaattatatctaattgtgaaaaattgaatgctttccttctaaaatcaggaaATagaaataaaatcatccctattcatgatcttctatttagaaaatactaagaaattgacac-aaaaaatgttaaaactaataagtacagcaaagttgcagaatacaagctcaatatacaaagattaattgtatttttgtacattactaacatataatccaaataagaaattaagaaaacaattatatttacaaaagcatcagaataaaatagaaataaatttaacaaaaaacatggatcacttgtacactggaaactataaaacataattgagaaaaaaatatggaagataggaggcaagactcacttgcagctcctactcagattaacagaacaagatgtggagactcacattatgaacttttgctccaagacatattgcaggaacatactgggaaaacaaacaaacaaaaa-------aaaaaattacagactttttgaaagaaggagcttcctgctgcaaattc-----tgtgagatagtt-aaaaactgactgcccaaagtttgagagggagaaagtccgcatctgaatacagattctccctggggaacctgaaaatcaagattacaggagaaagatttaacgttacctaaagctgaaacaaatttagagagccaagtgaagtataaaagtaaaagaagcagtgagaagagctggtccagcaggactcctggtccccagggaagccatttctgacttcatctcacaggggtcctttgagaggactgccagcagaattgtagaaggaccaaaggaacaagaaaacttccaggtgaactttttaataattttgacctaacgtgaaatttccggggcagaatcggttggggagtgggggcggtgaatgcgaagagcaggtgcaagcacagaacacatggcaggcagggatggaaaaggcctgaaagcccggcttgctttctcagggggaaggtttgtagcctgggtcaagaactccaccctgctcactggctgtctgggtgtaaacttagtgctgttggtggggcatggtgaaagtgagcctttctggctacataagagctgggagaggcaggtca-tgctggcattcccctacttccctggtgacctgtatgatgcagcagaggaagtcataatctcccCAGATTCCCTCTCTgaagaaagaacttaagaacttaaaaacaaagcattcaaattaacctaatacaacaaagacaaagaaaataaagtttgaaaaacatgaacaaagactccacgaagttttggattatgttaagcaaccaaacctaagaataattggtgttcatgagaaagatgatacatctaaaagtttggaaaacatatttgagagaataatcaaggaatacttccctagcctttctagagatctagacatacaagtacaagaagctcaaagaacacccgaggaattcatcacaaaaagatctttacctaggcacatggccatcaggtaatctaaagtcaaaacaaaagaaacgatcttgagagctgtgaggcaaaagcatcaggtagcctgtaaaggaaaacctatgagacaaacagcagatttttttagcagaaaccctacaagctagaaggcattgaggt-ctatctttattctcctt------------------aaaaaaaaaa-------attatcagccaagaatattgtatccagcaaaactaagcttcattaatgagcaaaagataaaatcttttttcaaacaaacaaatgctgagaggatttgtcactaccaaatgaatactaaaagaattactaaaaggagctccaaattttggaagaaattctcaaaatacaccaaaatagaaccttcttaaggttcctaaagcacaaatctcacagggcctataaaacaataacacaatg---aaaaaaaaa---------aaaggtattcaggcaacaaatggcatgatgaataaaaaagtacctcacatgtcaataccaacattgaatataaatggtctaattgctcaacttaagagatacagaatggcagaatggataaaaattcaccaagcaaggttctgctgtcttcaagagactcacctaacataaaaggatttacataaacttaaggttaaagggtagaaaaatatattccatgcaaataaacaccaagagccaacacaagtatctatttttatattagataaaacagactttaaagaaacagtagttaaaaagacaaagaagtacattatgtaatgataaaaggactagtccaacaggaaaatatcacaattctaaatatatatgcacctaacaccggagattccaaatttataaaacaattactactagacctaagaaatgagatagacagcatataata--------atagtgggga-ctttaataccccactgactgaactcgcatcaagacagaaagtcaacaaagaaacaatggacttaaactata-ccttcaacaaacggacttaacagatatttacagaacattcta--cccaatgattgcagaatatacattctattcatcagcacatagaacattctccaagatagaccatatgatagaccacaaaacaagtctcaataaatttaagaaaatcaaaattataccaagtactccttcagaccacagtggaataaaattggaaatcaactccaaagggaaccctcaaaaacatgcaaatacacggaaattaaatagtctgctcctaaatggtccttggagaaacaataaaatcaagatggatattaaaaatttgtttgaactgaatgataataatgacacaacctaacaaaacctcaggtatagagcaaaagcagtgctaaaaggaaagttcatagcattaaatgtctacatcaaaaagtcagaaagagcacacataggcaatctaaggtcataccttgaggagctacagaaacaagaacaaatcaaacccaaacccaaacccaaaccctacagaagaaaagaaataacaaagatcagagcaaaactaagtgaaattgaaacaaaaataaatacaaaagataaatgaaagaaaaaactggttcattgaaaagataaactaaaactaatagaacatgagtgaaattaaccaagacaagaagagagaagttccaaataagctcagttataaacaaaacaggaaataccacagaaatacagaagatcattcaaggctactataaacacttttatgtgcatgaact-aaaatcctagaggaaatggataaattcctggaaatataaaaccctcctagattaaaacaggaagaaatagaaactctgaatagaccaataacaaatagcaagattgaaatggtaatttaaaaattgccaacaaaaa--aaaagtctaggaccagatggattcacagctgaattctatcagacattca---aagatttgataccaatcctattgaaactattccaaacgatagagaaagagggactctccctaaattattttatggaaccagtgtcaccctactaccaaaaccaggaaagaacatgacaaaaaaagaaaactagagacatacgtctctgatgaacattaatgcaaaaattctcaacaaaacattagctaaccaaatccaacagcatatcaaaaagataatccaccatgaatcaagttggtttcataccgaggatttaaagatagtttaatatacataaatcaataaacatgatgcaccacataagcagaatcaaaaagaaaaaaatcacatgatcatctcaatacacacagaaaagcatttgataaaatccaatatggctttatgattaaaactctcagtaaaactggtatagaagggacataccttaaagtaatagaa i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150864573 4240 - 180432695 cacaaactcttccaaaaaaaaatagaagatgagaaaatacttcccattttattttatttgaccaGTATTACCATAATACCAAACCAAAGAAATCATAACAACAAAGAAACCCACAAACCAATGTTTCTTATGTATATTAATGCAAAATCTTCAAATGTCAGCAAACCAAagtgacactttaaaaaaattatataccatgACTAACTGGGATTTATCTCAATAGTACAAATTTGACTTGATATATGAAAATCAACtaatgtgatacaccatattaGCGCAATGAAAACTAAAAGCACATGATCATTTCTATAGATAAAGTAAAATCCTCTGACATAAGCCAACActgcttcatgataaaaacactcatcaaactagaaacagaaggaaactttttcAACTACGTAAAGGCCATCTGCAAAATAACAGCAGCTAAAATTATATCTAATTGTGAAAAATTGAATGCTTTCCTTCTAAAAtcaggaaatagaaataaaatcatcCCTATTCATGATCTTCTATTTAGAAAATACTAAGAAATTgacac-aaaaaatgttaaaactaatAAGTAcagcaaagttgcagaatacaagcTCAATATACAAagattaattgtatttttgtacattaCTAACATATAATCcaaataagaaattaagaaaacaattatatttacaaaagcatcagaataaaatagaaataaatttaacaaaaaacatGGATGACTTGTACactggaaactataaaacataattgagaaaaaaatatggaagatAGGAGGCAAGACTCACTTGCAGCTCCTACTCAGATTAACAGAACAAGATATGGAGACTCACAttatgaacttttgctccaagacaTATTGCAGGAACATACTGggaaaacaaacgaacaaaca-------aaaaaattacagactTTTTGAAAGAAGCAGGTTCCTGCTGCAAATTC-----TGTGAGATAGTT-AAAAACTGAGTGCCCAAAGTTTGAGAGGGAGAAAGTCCGCATCTGAATACAGATTCTCCCTGGGGAACCTGAAAATCAAGATTACAGGAGAAAGATTTAACCTTACCTAAAGCTGAAACAAATTTAGAGAGCCAAGTGaagtataaaagtaaaagaagcaGTG---AGAGCTGGTCCAGCAGGACTCCTggtccccagggaagccatttctgacttcATCTCACAGCGGTCCTTTGGGAGGACTGCCAGCAGAATTGTAGAAGGACCACAGGAACAAGAAAACTTCCAGGtgaactttttaataattttgaccTAACATGAAATTTCCACGGCAGAATtggttggggagtgggggtggtgAATGTGAAGAGCAGGTGCAAGCACAGAACACATGGCAGGCAGGGATGGAAAAGGCCTGAAAGCCCGGCTTGCTTTCTCAGGGGGAAGGTTTGTAGCCTGGGTCAAGAACTCCACCCTGCTCACTGGCTGTCTGGGTGTAAACTTAGTGCTGTTGGTGGGGCATGGTGAAAGTGAGCCTTTCTGGCTACATaagagctgggagaggcaggtca-TGCTGGCATTCCCctacttccctggtgacctgtatgaTACAGCAGAGGAAGTCATAATCTCCCCATATTCCCTCTCTGAAGAAAGAACTTAGGAACTC-AAGACAAAGCATTCAAATTAACCTAatacaacaaagacaaagaaaataaagtttgaaaaacatgaacaaagcctccaggaagtttgggattatgttaaacaaccaaacctaagaataattggtgttcatGAGAAAGATGATacatctaaaagtttggaaaacatatttgagagaataatCAAGGAATACTTCCCTGGCCTTTCTAGAGATCTAGACATACAagtacaagaagctcaaagaacacccgaggaattcatcacaaaaagatctttACCTAGGCACATAGCCATCAAGTAATCTAAagtcaaaacaaaagaaatgatctTGAGAGctatgaggcaaaagcatcaagtagcctgtaaaggaaaacctatGAGACAAACAGCAGA-TTTtttagcagaaaccctacaagctagaagggattgaggT-CTATCTTTatcctccttaaaaaaaaaaaaaaaaaaaaaaaaaaaa-------attatcagccaagaatactgtatccagcaaaactaagcttcattaaTGAGCAAAagataaaatc-tttttcaaacaaacaaatgctgagaggaTTTGTAACTACCAAATGAATACTAAAAGAATTAGTAAAAGGAGCTccaaattttggaagaaattctcaaaatacaccaaaatagaaccttctTAAGGTTCTTAAAGCAcaaatctcacagggcctataaaacaataacacaatg----aaaaaaaa---------aaaggtattaaggCAAAAAATGGCATGATGAATAAAAAAGTACCTCACATGTCAATACcgacattgaatataaatggtctaATTGCTCAACTTAagagatacagaatggcagaatggataaaaattcacCAAGGAAGgttctgctgtcttcaagagactcacctaacaaaAAAGGATTTACATCAACTTAAGGTTAAAgggtagaaaaatatattccacgCAAATAAACACCAAAAGCCAACAGAAGTATCTATtcttatattagacaaaacagactttaaagaaaCAGtagttaaaaagacaaagaagtacattatgtaatgataaaaggattagtccaacaggaaaatatcacaattctaaatatatatgcacctaacactggagattccaaatttatgaaacaattactactagacctaagaaatgagatagacagcataTAATA--------ATAGTGGGGACCTTTAATACCCCACTGACTGAATtctcatcaagacagaaagtcaacaaagaaacaatggacttaaccTATA-CCTtcaacaaatggacttaacagctatttacagaacattcta--cccaatgattgcagaatatacattctattcatcagcacatagaacattctccaagatagaccatacgatagaccacaaaacaagtctcaataaatttaagaaaatcaaaattataccaaATACTCCttcagactacagtggaataaaattggaaatcaactccaaagggAACCCTCAAAAACATGCACatacaaggaaattaaatagTCTGCTCCTAAATGGTCCTTGGAGAAACAATAAAACCAAGATGGATATTAAAAATTtgtttgaactgaatgataataatgacacaacctcACAAAACCTCAGGTAtagagcaaaagcagtgctaaaaggaaagttcatagcattaaatgtctACATCTAAAAGTCAGAAAGAGCACACATAGGCAATCTAAAGTCACACCTTTAGGGACTATAGAAACAtgagcaaat------caaacccaaacccaaaccctacagaagaaaagaaataacaaagatcagagcaaaactaagtgaaattgaaacaaaaataaatacaaaagataaatgaaagaaaaaacttgttcattgaaaaggtaaactaaaaCTAGTAGAACactagtgagattaaccaagacaAGAAGAGAGAAGTTCCAAATAAGCTCAGTTATAAACAAAACAggaaataccacagaaatacagaagatcattcaaggctactataaaCACTTTTATGTGCATGAACT-AAAatcctagaggaaatggataaattcctggaaatataaaaccctcctagattaaaacaggaagaaatggaaactctgaatagaccaataacaaatagcaagattgaaatggtaatttaaaaattgccaacaaaaa--aaaagtctaggaccagatggattcacagctgaattctatcagacattca---aagatttgataccaatcctattgaaactattccaaatgatagagaaagagggactcTCCCTAAATTATGTTATGGAACCAGTGTCACCCTactaccaaaaccaggaaagaacataacaaaaaaagaaaactagagacaAACGTCTctgatgaacattaatgcaaaaattctcaacaaaacattagctaaccaaatccaacagcatatcaaaaagataatccaccatgaatCAAGTTGGTTTCATACCAAGGATTTAAAGACAGtttaatatacataaatcaataaacatgatgcACATCATAAgcagaatcaaaaag-aaaaaatcacatgatcatctcaatagacacagaaaagcatttgataaaatccaatatggctttatgattaaaactcccAGTAAAACTGgtatagaagggacataccttaaagTAATAGAA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14965288 4243 - 90373283 cacaaactcttccaaaaaaaaatagaagatgagaaaacacttgccattttattttatttgaccagtattaccataataccaaaccaaagaaatcacaacaacaaagaaacccacaaaccaatgtttcttatgtatattaaagcaaaatcttcaaatgccagcaaaccaaactgacactttaaaaaaattatataccatgactaactgggatttatctcaatagtacaaatttgacttaatatatgaaaatcaactaatgtgatacaccatattagcacaatgaaaactaaaagcacatgatcatttctatagataaagtaaaatcctctgacataatccaacactgcttcatgataaaaacactcatcaaactagaaacagaaggaaactttttcaactgcataaaggccatctgcaaaataacaacagctaaaattatatctaattgtgaaaaattgaatgctttccttctaaaatcaggaaATagaaataaaatcatccctattcatgatcttttatttagaaaatactaagaaattgacac-aaaaaatgttaaaactaataagtacagcaaagttgcagaatacaagctcaatatacaaagattaattgtatttttgtacattactaacatataatccaaataagaaattaagaaaacaattatatttacaaaagcatcagaataaaataggaataaatttaacaaaaaacatggatcatttgtacactggaaactataaaacataattgagaaaaaaatatggaagataggaggcaagactcacttgcagcttccactcagattaacagaacaagatgtggagactctcattatgaacttttgctccaagacatattgcaggaacatactgggaaaacaaacaaacaaacaaacaaacaaaaaattacagactctttgaaagaagcagcttcctgctgcaaattc-----tgtgagatagtt-aaaaactcagtgcccaaagtttgagagggagaaagtccacatctgaatacagattctccctggggaacctgaaaatcaagattacaggagaaagatttaaccttacctaaagctgaaacaaatttagagagccaagtgaagtataaaagtaaaagaagcagtgagaagagctggtccagcaggactcctagtccccagggaagccatttatgacttcatctcacaggggtcctttgggaggactgccagtagaattgtagaaggaccacaggaacaagaaaacttccaggtgaactttttaataattttgacctaacatgaaatttccagggcagaatcggttggggagtgggggcggtgaatgtgaagagcaggtgcaagcacagaagacatggcaggcagggacggaaaaggcctgaaagcccagcttgctttctcagtgggaaggtttgtagcctgggtcaagaactccaccctgctcactggctgtctgggtgtaaacatagtgctgttggtggggcatggtgaaagtgagcctttctggctacataagagctgggagaggcaggtcactgctggcattcccctacttccctggtgacctgtatgatgcagcagaggaagtcataatctcccCAGACTCCTTCTCTgaagaaagaacttaagaacttaaaaacaaagcattcaaattaacctaatacaacaaagacaaagaaaataaagtttgaaaaacatgaacaaagactccacgaagttttggattatgttaaacaaccaaacctaagaataattggtgttcatgagaaagatgatacatctaaaagtttggaaaacatatttgagagaataatcaaggaatacttccctggcctttctagagatctagacatacaagtacaagaagctcaaagaacacctgaggaattcatcacaaaaagatctttacctaggcacacagccatcaggtaatctaaagtcaaaacaaaagaaacgatcttgagagctgtgaggcaaaagcatcaggtagcctgtaaaggaaaacctatgagacaaacagcaga-ttttttagcagaaaccctacaagctagaagggattgaggt-ctatctttatcttcctt-----------------aaaaaaaaaaa-------attatcagccaagaatattgtatccagcaaaactaagcttcattaatgaacaaaagataaaaccttttttcaaacaaacaaatgctgagaggatttgtcactaccaaatgaatactaaaagaattactaaaaggagctccaaattttggaagaaattctcaaaatacaccaaaatagaaccttcttaaggttcctaaagcacaaatctcacagggcctataaaacaataacacaatgaaaaaaaaaaaa---------aaaggtatacaggcaacaaatggcatgatgaataaaaaagtacctcacatgtcaataccaacattgaatataaatggtctaattgctcaacttaagagatacagaat-gcagaatggataaaaattcaccaagcaaggctctgctgtcttcaagagactcacctaacataaaaggatttacataaacttaagattaaagggtagaaaaatatattccatgcaaataaacaccaaaagccaacagaagtatctatttttatattagacaaaacagactttaaagaaacagtagttaaaaagacaaagaagtacattatgtaatgataaaaggactagtccaacaggaaaatatcacaattctaaatatatatgcacctaacactggagattccaaatttataaaacaattactactagacctaagaaatgagataaacagcatataataatagtgggatagtgggga-ctttaataccccactgactgaactcacatcaagacagaaagtcaacaaagaaacaatggacttaaactata-ccttcaacaaatggacttaacagatatttacagaacattcta--cccaatgattgcagaatatacattctattcatcagcacattgaacattctccaagatagaccatatgatagaccacaaaacaagtctcaataaatttaagaaaatcaaaattataccaagtactccttcagaccacagtggaataaaattggaaatcaactccaaagggaaccctcaaaaacatgcaaatacaaggaaattaaatagtctgctcctaaatggtccttggagaaacaataaaatcaagatggatattaaaaatttgtttgaactgaatgataataatgacacaacctaacaaaacctcaggtatagagcaaaagcagtgctaaaaggaaagttcatagcattaaatgtctacatcaaaaagtcagaaagagcacacataggcaatctaaggtcataccttgaggagctacagaaacaagaacaaat------caaacccaaacccaaaccctacagaagaaaagaaataacaaagatcagagcaaaactaagtgaaattgaaacaaaaataaatacaaaagataaatgaaagaaaaaactggttcattgaaaagataaactaaaactaatagaacattagtgagattaaccaagacaagaagagagaagttccaaataagctcagttataaacaaaacaggaaataccacagaaatacagaagatcattcaaggctactataa--acttttatgtacatgaact-aaaatcctagaggaaatggataaattcctggaaatataaaaccctcctagattaaaacaggaagaaatagaaactctgaatagaccaataacaaatagcaagattgaaatggtaattttaaaattgccaac-aaaa--aaaagtctaggaccagatggattcacagctgaattctatcagacattca---aagatttgataccaatcctattgaaactattccaaatgatagagaaagagggactctccctaaattattttatggaaccagtgtcaccctactaccaaaaccaggaaataatgtaacaaaaaaagaaaactagagacaaacgtctctgatgaacattaatgcaaaaattctcaacaaaacattagctaatgaaatccaacagcatatcaaaaagataatccaccatgaatcaagttggtttcataccgaggatttaaagatagtttaatatacataaatcaataaacatgatgcaccacataagcagaatcaaaaagaaaaaaatcacatgatcatctcaatagacacagaaaagcatttgataaaatccaatatggctttatgattaaaactctcagtaaaactggtatagaaggg-tataccttaaagtaatagaa i chlSab2.chr2 I 2345 C 0 e calJac3.chr21 21891903 10705 + 50472720 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e rheMac3.chr3 168514602 16250 - 198365852 I e ponAbe2.chr21 16885804 11020 + 48394510 I a score=4419299.000000 s hg38.chr21_KI270874v1_alt 33936 2456 + 166743 gatatctatgacagactcacagccaacattatactgaatgtgatagtgttaaaagcattcccctgagaacttcgacaagccaagaatgcccactttcaccacttctattcaacatagtattggaagtcctacccaaggcaatcagagaagagaaaaataaagggtatccaaatcggtaaagatgaagtcaaactgttgctgttcaccaatgatattatcatataactagaaaaccccaaagactcatccaaagagctcctaggtctgataaatg--------aaagtttcaggatacaaaatcaatgtacataaatcagtagcactgctatacaccaagggcaaccaagctgagaatcaaCtgatagggacaggaggcagggaaattctgggtagaagagggcaggtgcccagtgagggcccTGCTgattctcatcaaatccctggtctatcatggatagcttggtataattgagaggcttaattctagtcctccattatgcacacctgaaagtgtctcctcttccattctcccatctcatcattgggatcccatttagggtcatccaatggtactgtttctcttccagttggataaagtttgaccccttccctgacactatatgtgatacaaagctcaatcctttctggaaaggctaagaagggctttgataaagcacacctctctatctcctgattcagttgagggacacttaatccctaaatgtatttaaaaatccatgtattactaaaaaa-taagtgg-attactcaggtatcccctgatatcaggaggaagctgcagaaatgggccctgagaccagatagtactttagagaacctcctgaaattgaccacttccatcttttataatagagatagggaaacccaagagagagagaggagacacaggaaagaggcagaggcttcaatggccaccatgcaagcccacaaacccagaatccctgaggtgcacctcttaactgctacagatgtggtaagccaggaaattttaggaagaattccccaggcagcatgaggaacccaccttgaccctgtccaatctgcaaaggggaccactggaaggtggactgtcaccagggacactggtaactgggttcagagccaatcgcccaaatggtccagcaggactgatggctcccagggttcctctttccagctccagtggtccagaccaccactaccatccaggagctccagataattttggaaactgaatagagaaaagtggatctccctctgcacaccatggctggtctctcagttctcctctccaatctgag-----------------------ctc----cctctactctcttagcataac-tagtgaggggtgtctcaggaagtcctttaatccaatattcttcccaacccgttaattgtagt---tcaggagacctcttgttcacccatgcctttctaattatccctgaaagcaccaactcctctgttgggtaggaatattctgacccatatggggaccaccatcctgatggccacaggacaaactctttctctctccctagtggagactaatattaacccagaagtttgggcaattcaagggaaaattggctgagccacaaccaccataccgg-ctgggtc------caccttaaggctctcacctcctttcctaaccagaaacaatagcccctgaaaccagaagttaagaaaggactagaagccattattgataacttaaggttgcaaggcctcctcaaaccctggaacagccctttaataccccaatattcagggcacaaaaa-cccagtt-gggaatggagactagttcagtacctccacctcgttaatgaggctgtggttccaattcacctggtggttcccaatccacattccctactagctcaaatacctaaggaaactaaatagttcacagtcccagacctaaaggatgccttcttctgcctaccattgcaccccaactcccaatatttgtttgcatttgaggatccctccaaataaaccacccagttaacctgaatgatgttacctcagggactctgagatggcccccacgtgtttggacaggcattgtcaagagaaccctctgagttactttatcctcaggtgaaagttttacagtatgtagatgacatacttctctgaacttcaactgaggaaatctctcaggagggcagtaaggctcttcttaatttcctggctaacagagaatacaaggtttcaaaatctaaagctcagctctgtcagacttaagtgaagtacctaggtctggtcttggcagagtggaccagggcattgagcaaagaaaggattaatcccatttcctcctttcctttccccaaaacactcaagcaac-tgaggggattcttaggcattacaggattctgcagactatggatacctgggtacagtgaatagctcatcccttatatcacctaataaaggagatttggatagctaaaactcactaatttgggaaccagaggcta s panTro4.chr21 3646789 2457 + 32799110 gatatctatgacagactcacagccaacattatactgaatgggatagtgttaaaagcattcccctgagaacttcgacaagccaagaatgcccactttcaccacttctattcaacatagtgttggaagtcctacccaaggcaatcagagaagagaaaaataaagggtatccaaatcggtaaagatgaagtcaaactgttgctgttcaccagtgatatcatcatataactagaaaaccccaaagactcatccaaagagctcctaggtctgataaatg--------aaagtttcgggatacaaaatcaatgtacataaatcagtagcactgctatacaccaagggcaaccaagctgagaatcaaCtgatagggacaggaggcagggaaattctgggtagaagagggcaggtgcccagtgagggcccTGCTgattctcatcaaatccctggtctatcatggatagcttggtataattgagaggcttaattctagtcctccattatgcacacctgaaagtgtctcctcttccattctcccatctcatcattgggatcccatttagggtcatccaatggtactgtttctcttccagttgaataaagtttgaccccttccctgacactatatgtgatacaaagctcaatcctttctggaaaggctaagaagggctttgataaagcacacctctctatctcctgattcagttgagggacacttaatccctaaatgtatttaaaaatccatgtattactaaaaaaataagtgt-attactcaggtatcccctgatatcaggaggaagctgcagaaatgggccctgagaccagatagtactttagagaacctcctgaaagtgaccacctccatcttttataatagagatagggaaacccaagagagagagaggagacacaggaaagaggcagaggcttcaatggccaccatgcaagcccacaaacccagaatccctgaggtgcacctcttaactgctacagatgtggtaagccaggaaattttaggaagaattccccaggcagcatgaggaacccaccttgaccctgtccaatctgcaaaggggaccactggaaggtggactgtcaccagggacactggtaactgggttcagagccaatcgcccaaatggtccagcaggactgatggctcccagggttcctctttccagctccagtggtccagaccaccattaccatccaggagctcaagataattttggaaactgaatagagaaaagtggatctccctctgcacaccatggctggtctctcagttctcctctccaatctgag-----------------------ccc----cctctactctcttaacataac-tagtgaggggtgtctcaggaagtcctttaatccaatattcttcccaaccccttaattgtagt---tcaggagacctcttgttcacccatgcctttctaattacccctgaaagtgccaactcctctgttgggcaggaatattctgacccatatggggaccaccatcctgatggccacaggacaaactctttctctctccctagtggagactaatattaacccagaagtttgggcaattcaagggaaaattggctgagccacaaccaccataccgg-ctgggtc------caccttaaggctctcacctcctttcctaaccagaaacaatagcccctgaaaccagaagttaagagaggactagaagccattattgataacttaaggttgcaaggcctcctcaaaccctggaacagccctttaataccccaatattcagggcacaaaaa-cccagtt-gggaatggagactagttcagtacctccacctcgttaatgaggctgtggttccaattcgcctggtggttcccaatccacattccctactagctcaaatacctaaggaaactaaatagttcacagtcccagacctaaaggatgccttcttctgcctaccattgcaccccaactcccaatatttgtttgcatttgaggatccctccaaataaaccacccagttaacctgaatgatgttacctcagagactctgagatggcccccacatgtttggacaggcattgtcaagagaaccctctgagttactttacccccaggtgaaagttttacagtatgtagatgacatacttctctgaacttcaactgaggaaatctctcaggagggcagtaaggctcttcttaattttctggctaacagagaatacaaggtttcaaaatctaaagctcagctctgtcagacttaagtgaagtacctaggtctggtcttggcagagtggaccagggcattgagcaaagaaaggattaatcccatttcctcctttcctttccccaaaacactcaagcaac-tgaggggattcttaggcattacaggattctgcagactatggatacctgggtacagtgaatagctcatcccttatatcacctaataaaggagacttggatagctaaaactcactaatttgggaaccagaggcta i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16896824 2456 + 48394510 gatagctatgacaaactcacagccaacattatactgaatgggataatgttaaaagcattcccgtgagaacttcgacaagccaagaatacccactttcaccacttctgttcaacatagtattggaagtcctacccaaggcaattggagaagagaaaaataaagggtatccaaatcggtaaagatgaagtcaaactgttgctgttcaccaatgatatcatcatataactagaaaaccctaaagactcatccaaagaactcctaggtctgataaatg--------aaagtttcaggatacaaaatcaatgtacataaatcagtagcactgctatacaccaagggcaaccaggctgagaatcaaCtgatagggacaggaggcagggaaattctgggtagaagagagcaggtccccagtgagggcACTGCTgattctcatcaaatccctggtctatcatggatagcttggtataattgagaggcttagttctagtcctccattatgcacacccgaaagtgtctcctcttccattctcccatctcatcattgggatcccatttagggtcatccaatggtactgtttctcttccagttggataaagttcaaccccttccctgacactatatgtgatacaaagctcaatcctttctggaaaggctaagaagggctttgataaagtacacctctctatctcctgattcagttgaggagCACTTAATCCCTAAATGTATTTAAAAATACATGTATTACTAAAAAAataagtgt-attactcaggtatcccctgatatcaggaggaagctgcagaaatgggccctgagaccagatagtactttagagaacctcttgaaagtgacgacctccatcttttataatagagatagggaaacccaagagagagagaggagacacaggaaagaggcagaggcttcagtggccaccatgcaagcccacaaacccagaatccctgaggtgcaccatttaactgctacagatgtggtaagccaggaaattttaggaagaattccccaggtagcatgaggaacccaccttgaccctgtccagtctgcaaaggggaccactggaaggtggactgtcaccgaggacactggtaactgggttcagagccaatcacccaaatggtccagcaggactggtggctcccagggttcttctttccagctccagtggtccagaccaccattaccatccaggagccccagataattttggaaactaaatagaggaaagtggatctccctctgcacagcatggctggtctctccattctcctctccaatctgag-----------------------ccc----tctctactctcttagcataac-tagtgaggggtgtctcaggaagtcctttaatccaatatttttcccaaccccttaattgtagt---tcgggagacctcttgttcacccatgcctttcttattatgcctataagca-caactcttctgttgggcaggaatattctgacccatatggggaccaccatcctgatggccacaggacaaactctttgtctcttcctagtggagactaatattaacccagaagtttgggcaattcaagggaaaattggctgagccacaaccaccataccag-ctgggtc------caccttaaggctctcacctcctttcctaaccagaaaaaatatcccctgaaaacagaagttaagaaaggactagaagccatcattgataacttaaggttgcgaggcctcctcaaaccctgcaatagccctttaataccccaatattcagggcacaaaaa-cccagtg-gggaatggagactagttcaggacctccacctcgttaatgaggctgtggttccaattcacctggtggttcccaatccacattccctactagctcaaatacctaaggaaactgaatagttcacagtcccagacctaaaggatgccttcttctgcataccattgccctccaactcccaatatttgtttgcatttgaggatctctccaaccaaaccacccagttaacctgaatgatgttacctcagggcctctgagatggcccccacgtgtttggacaggcattttcaagagaaccctctgagttactttatcctcaggtgaaagttttacagtatatagatgacattcttctctgaacttcaactgaggaaatctctcaggagggcagtaaggctcttcttaattttctggctaacagagaatacaaggtttcaaaatctaaagctcaactctgtcagacttaagtgaagtacctaggtctggtcttggcagagtggaccagggcattgagcaaagaaaggattaatcccatttcctcctttcctttccccaaaacactcaagcaac-tgaggggattcttaggcattacaggattctgcagactatggatacctgggtacagtgaatagctcatcccttataccacctaataaaggagacttggatagctaaaactcactaatttgggaaccagaggcta i ponAbe2.chr21 I 11020 C 0 s nomLeu3.chr25 4406616 2484 + 32716333 gatatctatgacaaactcacagccaacattatactaaatgggataatgttaaaagcaatcccctgagaacttcgacaagccaagaatgcccactttcaccacttctattcaacatagtattggaagtcctacccaaggcaatcagagaagagaaaaataaagggtatccaaatcggtaaagatgaagtcaaactgttgctgttcaccaatgatatcatcatataactagaaaaccctaaagactcatccaaaaagctcctaggtctgataaatg--------aaagtttcaggatacaaaagcaatgtacacaaatcagtagcactgctatacaccaagggcaaccaaggtgagaatcaaCtgatagggacaggaggcagggaaattctgagtggaagagggcaggttcccattgagggccctactgattctcaccaaatccctggtctatcatggatagcttgctataattgagaggcttagttctagtcctccattatgcacacccgaaagtgtctcctcttccattctcccatcccatcattgggatcccatttagggtcatccagtggtactgtctctcttccagttggataaagttcgaccccttccctgacaccatatgtgatacaaagctcaatcctttctggaaaggctaagaaggcctttgataaagcacacctctctatctcctgattcagttgagggacacttaatccctaaatgtatttaaaaatacatgtatgactaaaaaa-taagtgtaattactcaggtatcccatgatatcaggatgaagctgcagaaatgggccctgagaccagatagtacttcagagaacctcctgaaagtgaccacctccatctttcataatagagatagggaaacccaagagagagagaggagacacaggaaagaggcaggggcttcaatggccaccatgcaagcccacaaacccagaatccctgacgtgcacctcttaactgctacagatgtggtaagccaggaaattttaggaagaattccccaggcagcatgaggaatccaccttgaccctgtccaatctgcaaaggggaccactggaaggtggactgtcaccagggacactggtaactgggttcagagccaattgcccaaatggtccagcaggactgatggctcccagggttcctctttccagctccagtggtccagaccaccattaccatccaggagtcccacataattttggaaactgaatagaggaaagtggatctccctctgcacaccatagctggtctctcagttctcctctccaatctgagaggatctccaatctgagatccttccctagacctctactctcttagcatgac-tagtgaggggtgtctcaggaagtcctttaatccaatatttttcccaaccccttaattgtagtagctcaggagacctcttgttcacccatgcctttctaattatgcctgaaagca-caactcctctcttgggaaggaatattctgacccatacggggaccaccatcctgatggccacaggacaaactttttgtctctccctagtggaaactaatattaacccagaagtttgggcaattcaagggaaaattggctgagccacaaccaccctacc-g-ctgggtc------caccttaaggctctcacctcctttcctaaccagaaacaatatcccctgaaaccagaagttaagaaaggactagaagccatca-tgataacttaaggttgcaaggcctcctcaaaccctggaacagccctttaataccccaata-tcagggcacaaaaaccccagttggggaatggagactagtttaggacctccacctcgttaatgaggctggggctccagttcacctggtgattcccaatccacattccttactagctcaaatacctaaggaaactaaatagttcacagtcccagacctaaaggatgccttcttctgcataccattgcaccccaactcccaatatttgtttgcatttgaggatccctccaaccgaaccacccagttaa-ctgaatgatgttacctcagggactctgagatggcccccacatgtttggacagccattgtcaagagaaccctctgagttattttatcctcaggtgaaagttttacagtatatagatgacattattctctgaactccaactgaggaaatccctcaggagggcagtaaggctcttcttaattttctggctaacaaagaatacaaggtttcaaaatctaaatctcagctctgtcagacttaagtgaagtacctaggtctggtcttggcagagtggaccagggcattgagcaaagaaaggattaatcccatttcctcctttcctttccccaaaacactcaagcaac-tgaggggattcttaggcattacaggattctgcaggctatgggtacctgggtacagtgaatagctcatcccttatatcacctaataaaggagacttggatagctaaaactcactaatttgggaaccagaggcta i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162184057 2467 - 192294377 gatatctatgacaaactcacagccaacattgtactgaatgggataatgttgaaagcattcccctgagaactttgacaagccaagaatgcccactttcaccacatctattcaacataatattggaagtcctaaccgaagcaatcagagaagaaaaatataaaggatatctaaatcggtaaagatgaagtcaaactgttgctgttcaccaatgataccatcatataactagaaaactctgaagactcatccaaaaagctcctaggtctgataaatgaattcagtaaagtttcaggatacaaaatcaatgtacacaaatcagtagcactgctatacaccaagggcaaccaagctgagaatcaattgacagggacaggaggcagggaaattctgggtagaagagtgcaggtctccagtgagggccctgctgattctcaccaaatccttggtctatcatggatagcttggtataattgagaggcttagttctagtcctccattatgcacacccgaaagtgtctcctcttccattctcccatctcatcattaggatctcatttagggtcatccagtggtactgtttctcttccacttggataaagtttgaccccctccctgacactatatgtgatacaaagctcgatccttcctggaaaggctaagaagggctttgataaagcacaactctctatctcctgattcagttgagggacaattaatccctaaatgtatttaaaagtagatgtattactaaaaaa-taagtgt-gttagtcaggcagccccttatagcaggaggaagttgcagaattgggccctgagaccagatagtactttagagaacctccttaaagtgaccaccttcatcttttataatagagatagggaaacccaagagagagagaggagacaaaggaaagaggcaggggatttaatggccaccgtgcaagcccacaaacccagaatccctgaggtgcacctcttaactgctacagatgtgctaagccaggaaattttaggaagaactccccaggcagcataaggaacccaccttgaccctgtccaatccataaaggggaccactggaaggtagactgtcaccggggacactagtaactgagtccagagtcaatcacccaaacgttccagcaggactgatggctcccagggttcctctttccagctccagtggtctggaccactattaccatccaggagccccaggtaattctggaaactgaagggaggaaagtggatctccctctgcacaccacggccggtctctcagttctcctctccaatctgag-----------------------ccc----tctctactctcttagcatgacttagtaaggagtgtctcaggaagtcctttaatccaatatttttctcaactccttaattgtagt---ttaggagacctcttgttcacccatgcctttctaattatgcctgaaagca-caaatcttctgttgggcaggaatattctgacctatatggggaccaccatcctgatggccacaggacaaactctttgtctttccctagtgaagactaatattatcccagaagtttgggcaattcaagggaaaattggctgagccacaaccaccatactggtctgggtattacagtaccttaaggctctcacctcctttcctaaccagaaacaatatcccctgaaaccagaaattaggaaaggactagaagccgtcattgataac--aaagttgcagggccttctcaaaccctggaacagtcctttaataccccaatattgagggcacaaaaa-cccaatg-gggaatggagactagttcaggacctccacctcattaatgaggctgtggtttcagttcacctggtggttcccaatccacattccctactagctcaaatacctgagggaactaaatggttcacagtcccagacctaaaggatgccttcttctgcataccattgcaccccaactcccaatatttgtttgcatttgaggatccctccaagcaaaccacccagttaacctgaatgatgttacctcagggaccctgagatggcccccacgtgtttggacaggcactgtcaagagaaccctctgagttactttatcctcaggttaaagttttacagtttatagatgacattcttctctgcacttcaactgaggaaacctctcaggagggcagtaaagctcttcttaattttctggctaacagagaatacaaattttcaaaatctaaagctcagctctgtcagacttaagtgaagtacctaggtctggtcttggcagagtggaccagggcattgagcaaagaaaggattaatcccatttcctcctttcctttctccaaaacactcaagaaacattacagga---ttaggcattacaggattctgcagactacggatacctgggtacagtgaataactcatcccttatatcaactaataaaggagacttggctagctaaaactcactaatttgggaaccagaggcta i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150868813 2467 - 180432695 GatatctatgacaaactcacagccaacattgtACTGAATGGGATaatgttgaaagcattcccctgagAACTTTGACAAgccaagaatgcccactttcaccacttctattcaacataatattggaagtcctaACCGaagcaatcagagaagagaaaaataaaggatatccaaatcggtaaagatgaagtcaaactgttgctgttcacCAATGATATCATCATATaactagaaaaccctgaagactcatccaaaaagctcctaggtctgataaatgaattcagtaaagtttcaggatacaaaatcaatgtacacaaatcagtagcactgctatacaccaagggcaaccaagctgagaatcaattgatagggacaggaggcagggaaattctgggTAGAAGAGTGTGGGTCCCCAGTGAGGGCCCTGCTGATTCTCACCAAATACTTGGTCTATCATGGATAGCTTGGTATAATTGAGAGGCTTAATTCTAGTCCTCCATTATGCACAGCCGAAAGTGTCTCCTCTTCCATTCTCCCATCTCATCATTGGGATCCCATTTAGGGTCATCCAGTGGTACTGTTTCTCTTCCAGTTGGATAAAGTTTGACCCCCTCCCTGACACTATATGTGATACAAAGCTCGATCCTTCCTGGAAAGGCTAAGAAGGGCTTTGATAAAGCACAACTCTCTATCTCCTGATTCAGTTGAGGGACAATTAATCCCTAAACGTATTTAAAAGTAGATGTATTACTAAAAAA-TAAGTGT-GTTAGTCAGGCAGCCCCTTATAGCAGGAGGAAGTTGCAGAAATGGGCCCTGAGACCAGATAGTACTTTAGAGAACCTCCTGAAAGTGACCACCTTCATCTTTTATAATAGAGATAGGGAAAcccaagagagagagaggagacaaagGAAAGAGGCAGGGGATTTAACGGCCACCGTGCAAGCCCACAAACCCAGAATCCCTGAGGTGCACCTCTTAACTGCTACAGATGTGGTAAGCCAGGAAATTTTAGGAAGAATTCCCCAGGCAGCATAAGGAACCCACCTTGACCCTGTCCAATCCATAAAGGGGACCACTGGAAGGTGGACTGTCACCGGGGACACTAGTAACTGAGTCCAGAGTCAATCGTCCAAACGTTCCAGCAGGACTGATGGCTCCCAGGGTTCCTCTTCCCAGCTCCAGTGGTCTGGACCACTATTACCATCCAGGAGCCCCAGGTAATTCTGGAAACTGAAGGGAGGAAAGTGGATCTCCCTCTGCACACCACGGCTGGTCTCTCGGTTCTCCTCTCCAATCTGAG-----------------------CCC----CCTCTACTCTCTTAGCATGACTTAGTAAGGGGTGTCTCAGGAAGTCCTTTAATCTAATATTTTTCTCAACTCCTTAATTGTAGT---TTAGGAGACCTCTTGTTCACCTATGcctttctaattatgcctgaaagtA-CAAATCCTCTGTTGGGCAGGAATATTCTGACCTATATGGGGACCACCATCCTGATGGCCACAGGACAAACTCTTTGTCTTTCCCTAGTGGAGACTAATATTATCCCAGAAGTTTGGGCAATTCAAGGTAAAATTGGCTGAGCCACAACCACCATACTGATCTGGGTATTACAGTACCTTAAGGCTCTCACCTCCTTTCCTAACCAGAAACAATATCCTCTGAAACCAGAAATTAGGAAAGGACTAGAAGCCATCATTGGTAAC--AAAGTTGCAGGGCCTTCTCAAACCCTGGAACAGTCCTTTAATACCCCAATATTGAGGGCACAAAAA-CCCAGTG-GGGAATGGAGACTAGTTCAGGACCTCCACCTCATTAATGAAGCTGTGGTTTCAGTTCACCTGGTGGTTCCCAATCCACATTCCCTACTAGCTCAAATACCTGAGGGAACTAAATGGTTCACAGTCCCAGACCTAAAGGATGCCTTCTTCTGCATACCATTGCACCCCAACTCCCAATATTTGTTTGCATTTGAGGATCCCTCCAAGCAAACCACCCAGTTAACCTGAATGATGTTACCTCAGGGACCCTGAGATGGCCCCCACGTGTTTGGACAGGCACTGTCAAGAGAACCCTCTGAGTTACTTTATCCTCAGGTTAAAGTTTTACAGTTTATAGATGACATTCTTCTCTGCACTTCAACTGAGGAAACCTCTCAGGAGAGCAGTAAAGCTCTTCTTAATTTTCTGGCTAACAGAGAatacaaattttcaaaatctAAAGCTCAGCTCTGTCAGACTTAAGTGAAGTACCTAGGTCTGGTCTTGGCAGAGTGGACCAGGGCATTGAGCAAAGAAAGGATTAATcccatttcctcctttcctttctccaaaACACTCAAGCAACATTACAGGA---TTAGGCATTACAGGATTCTGCAGACTACGGATACCTGGGTACAGTGAATAACTCATCCCTTATATCAACTAATAAAGGAGACTTGGGTAGCTAAAACTCACTAATTTGGGAACCagaggcta i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14969531 2467 - 90373283 gatatctatgacaaactcacagccaacattgtactgaatggaataatgttgaaagcattcccctgagaactttgacaagccaagaatgcccactttcaccacttctattcaacataatattggaagtcctaaccgaagcaatcagagaagagaaaaataaaggatatccaaatcagtaaagatgaagtcaaactgttgctgttcaccaatgatatcatcatataactagaaaaccctgaagactcatccaaaaagctcctaggtctgataaatgaattcagtaaagtttcaggatacaaaatcaatgtacacaaatcagtagcactgctatacaccaagggcaaccaagctgagaatcaaTtgatagggacaggaggcagggaaattctgggtagaagagtgcaggtctccattgagggcccTGCTgattctcaccaaatacttggtctatcatggatagcttggtataattgagaggcttagttctagccctccattatgcacagcggaaagtgtctcctcttccattctcccatctcatcattgggatcccatttagggtcatccagtggtactgtttctcttccagttggataaagtttgaccccctccctgacactatacgtgatacaaagctcgatccttcctggaaaggctaagaagggctttgataaagcacaactctctatctcctgattcagttgagggacaattaatccctaaatgtatttaaaagtagatgtattactaaaaaa-taagtgt-gttagtcaggcagccccttatagcaggaggaagttgcagaaatgggccctgagaccagatagtactttagagaacctcctgaaagtgaccaccttcatcttttataatagagatagggaaacccaagagagagagaggagacaaaggaaagaggcaggggatttaatggccactgtgcaagcccacaaacccagaatccctgaggtgcacctcttaactgctacagatgtggtaagccaggaaattttaggaagaactccccaggcagcataaggaacccacattgaccctgtccaatccataaaggggacccctggaaggtagactgtcaccggggacactagtaactgagtccagagtcaattgcccaaatgttccagcaggactgatggctcccagggttcctctttccagcttcagtggtccggaccactattaccatccaggagccccaggtaattctggaaactgaagggaggaaagtggatctccctctgcacaccacagctggtctctcggttctcctctccaatctgag-----------------------ccc----cctctactctcttagcatgacttagtaaggggtgtcgcaggaagtcctttaatccaatatttttctcaaccccttaattgtagt---ttaggagacctcttgttcacccatgcctttctaatta-gcctgaaagca-caaatcctctgttgggcaggaatattctgacctatatggggaccaccatcctgctggccacaggacaacctctttgtctctccctagcggagactaatattatcccagaagtttgggcaattcaagggaaaattggctgagccacaatcaccatactggtctgggtattacggtaccttaaggctgtcacctcctttcctaaccagaaaaaatatcccctgaaaccagaagttaggaaaggactagaagccatcattgataacttaaagttgcagggccttctcaaaccctggaacagtcctttaacaccccaatattgagggcac-aaaa-cccaatg-gggaatggagactagttcaggacctccacctcattaatgaggctgtggtttcaattcacctggtggttcccaatccacattccctactagcttaaatacctgagggaactaaatggttcacagtcccagacctaaaggatgccttcttctgcataccattgcaccccaactcccaatatttttttgcatttgaggatccctccaagcaaaccacccagttaacccgaatgatgttacctcagcgaccctgagaaggcccccacgtgtttggacaggcattgtcaagagaaccctctgagttactttatcctcaggttaaagttttacagtttatagatggcattcttctctgcacttcaactgaggaaacctctcaggagggcagtaaagctcttcttaattttctggctaacagagaatacaaattttcaaaatctaaagctcagctctgtcagacttaagtgaagtacctaggtctggtcttggcagagtggaccagggcactgagcaaagaaaggattaatcccatttcctcctttcctttctccaaaacactcaagcaacattacagga---ttaggcattacaggattctgcagactacggatacctgggtacagtgaataactcatcccttatattaactaataaaggagacttgggtggctaaaactcactaatttgggaaccagGggcta i chlSab2.chr2 C 0 I 42 e calJac3.chr21 21891903 10705 + 50472720 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e rheMac3.chr3 168514602 16250 - 198365852 I a score=44796.000000 s hg38.chr21_KI270874v1_alt 36392 104 + 166743 gaaaagcctttgaccaactgaaacaagccttgcttaaggcaatactccttagtcttccca-tagggaagatgtttaatctttatacctcagaaggaaagggaatg s panTro4.chr21 3649246 104 + 32799110 gaaaagcctttgaccaactgaaacaagccttgcttaaggcaatactccttagtcttccca-tagggaagatgtttaaactttatacctcagaaggaaagggaatg i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16899280 103 + 48394510 g-aaatcctttgaccaactgaaacaagccttgcttaagggaatactccttagtcttccca-tagggaagatgtttaatctttatacctcagaaggaaagggaatg i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4409100 104 + 32716333 gaaaagcctttgaccaactgaaacaagccttgcttaaggcaatactccttagtcttccca-tagggaagatgtttaatctttatacctcagaaggaaagggaatg i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162186524 42 - 192294377 -------------------------------------------atttttttgtatttttagtagagacggggtttcaccatgtta-------------------- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150871280 42 - 180432695 -------------------------------------------atttttttgtatttttagtagagatggggtttcaccatgtta-------------------- i papAnu2.chr3 C 0 C 0 e calJac3.chr21 21891903 10705 + 50472720 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e rheMac3.chr3 168514602 16250 - 198365852 I e chlSab2.chr2 14971998 42 - 90373283 I a score=218794.000000 s hg38.chr21_KI270874v1_alt 36496 116 + 166743 gccttgggagttctaacccacatctggggtccagcccagaaacctgtaggctacctaggtaaggagcttgattttgtagccaaaggagagctggcttgcctccaggcagttgcagc s panTro4.chr21 3649350 116 + 32799110 gccttgggagttctaacccacatctggggtccagcccagaaacctgtaggctacctaagtaaggagcttgattttgtagccaaaggagagctggcttgcctccaggcagttgcagc i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16899383 116 + 48394510 gccttgggagttctaacccacatctggggtccagcccagaagcctgtaggctacctaagtaaagagcttgattttgtagccaaaggagagctggcctgactccaggcagttgcagc i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4409204 116 + 32716333 gccttgggagttctaacccccatctggggtccagcccagaagcctgtaggctacctaagtaaggagcttgattttgtagccaaaggagagctcgcctgcctccaggcagttgcagc i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162186566 116 - 192294377 gccTtgggagttctaacccacatctgtggtccagcccagaagcctgtaggctacctaagtaaggagcttgattttgtagccaaaggacagctggcctgcctccaggcagttgcagc i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150871322 116 - 180432695 gccttgGGAGTTCTAACCCACATCTGTGGTCCAGCCCAGAAGCCTATAGGCTACCTAAGTAAGGAGCTTGATTTTGTAGCCAAAGGACAGCTGGCGTGCCTCCAGGCAGTTGCAGC i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14972040 116 - 90373283 gccTtgggagttctaacccacatctgtggtccagcccagaagcctgtaggctacctaagtaaggagcttgattttgtagccaaaggacagctggcctgcctccaggcagttgcagc i chlSab2.chr2 I 42 I 25 e calJac3.chr21 21891903 10705 + 50472720 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e rheMac3.chr3 168514602 16250 - 198365852 I a score=2194.000000 s hg38.chr21_KI270874v1_alt 36612 8 + 166743 ---------agtagcct------- s panTro4.chr21 3649466 8 + 32799110 ---------agtagcct------- i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16899499 8 + 48394510 ---------agtagcct------- i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4409320 8 + 32716333 ---------agtagcct------- i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162186682 24 - 192294377 tggtaccagaatgtcctgaatgat i macFas5.chr3 C 0 I 1 s papAnu2.chr3 150871438 24 - 180432695 TGGTACCAGAATGTCCTGAATGAT i papAnu2.chr3 C 0 I 1 e calJac3.chr21 21891903 10705 + 50472720 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e rheMac3.chr3 168514602 16250 - 198365852 I e chlSab2.chr2 14972156 25 - 90373283 I a score=2878638.000000 s hg38.chr21_KI270874v1_alt 36620 1606 + 166743 ttctggttaccagaggttactgagttaaccatagggaataacttaaccatctatactctgcataatgtggcaggactttggttttctaaggggagtctctggctaatgaataactgcctcctcaggtatcaagctctgctattagagggatctgcagtccaaacaaggacctgtccatccctaaattcagccaccttcctcccaggggaagctgagagcttgaacatgactgtgaacagatagtagtatccagccagagagggcctctaggaaacccccttagagaacccagacaaaattctctttatgagtggaaattcttttgtaaaacaagagatccataaagcatggtatgctatagttattctgactgatatttttgagagctcgtctctctcctcgggaacaagagctcaactagctgagctcattgccctcacgagggcactcaaattaagcaaagggaaagcagttaacatttacgctgattctaagtatcctttcctagacctccatgcccatgctgctatctggaaagagagaaactttctcacagctaatgggtctcccattaaataccaacaggaaattaattgactatcatcctcagttttcatcccataggaagtagcagtaacacaatgtgaaggcccccaaaaggaatggataaagtaactgagggaaataggttggaagactaagcagctaagtcagcagagagagggcctcagatttctgatccacttgaagccccactggtctgggagggcctcataggagaaataaaacttcagtattctcctatggaaatagaatggggcacctcttggggttacatctttcagtcctcaggatggccacaattggaggatgccaagcttcatctactggctgccaaacaatggaaagttcttaaaagccttcaccaggcctttcacctgggtaaagataaaacctttcaaatggttcagagattgttctcaggtaaaaacctgacacaaatagttaaacaggttgttaatgcttgcaagatttgccttaaaaatcatcccttcagctgaccacttctgcacccaggaactcaaaggacagcagg----ctgagggaaaactagcaaatggatttcacccatatgtcaaaggtaaggggcatccagtaccttctagaatgaacagataccttcactaactgggtagagccatttccatgtgggacaaagaaagcctccaaggtggtaaaagtactgattaatgagataattccttgccctggcctgcctaagcaacttcagagagataatggcctctcattcaaggcagctgtgaccca-g--ggggggtcacaaaggcactaggaatacactaccatcttcattgtgcttggagaccacgatgctcaggaaagatagaaaagacaaatgatattataaaaaaggcacctcagaaaactatctccctcagactaatcttccctagactaaccttctcaccatagctctactacatatttaaaacagccctttaaagctaggtttgagtccttttgaaatgatgtatggacagccttttctcaccaatgatttcttgctagacaaataaatctctgatttgct s panTro4.chr21 3649474 1608 + 32799110 ttctggttaccagaggttactgagttaaccatagggaataacttaaccatctatactctgcataatgtggcaggactttggttttctaaggggagtctctggctaatggataactgcctcctcaggtatcaagctctgctattagagggatctgcagtccaaacaaggacctgtccatccctaaattcagccaccttcctcccaggggaagctgggagcttgaacatgactgtgaacagatagtagtatccagccagagagggcctctaggaaacccccttagagaacccagacaaaattctctttatgagtggaaattcttttgtaaagcaagagatccataaagcatggtatgctatagttactctgactgatatttttgagagctcgtctctctcctcgggaacaagagctcaactagctgagctcattgccctcacgagggcactcaaattaagcaaagggaaagcagttaacatttacgctgattctaagtatcctttcctagacctccatgcccatgctgctatctggaaagagagaaactttctcacagctaatgggtctcccattaaataccaacaggaaattaattgactatcatcctcagttttcatcccataggaagtagcagtaacacaatgtgaaggcccccaaaaggaatggataaagtaactgagggaaataggttggaagactaagcagctaagtcagcagagagagggcctcagatttctgatccacttgaagccccactggtctgggagggcctcgtaggagaaataaaacttcagtattctcctatggaaatagaatggggcacctcttggggttacatctttcagtcctcaggatggccacaattggaggatgccaagcttcatctactggctgccaaacaatggaaagttcttaaaagccttcaccaggcctttcacctgggtaaagataaaacctttcaaatggttcagagattgttctcaggtaaaaacctgacacaaatagttaaacaggttgttaatgcttgcaagatttgccttaaaaatcatcccctcagctgaccacttctgcacccaggaactcaaaggacagcagg----ctgagggaaaactagcaaatagatttcacccatatgtcaaaggtaaggggcatccagtaccttctagaatgaacagataccttcactaactgggtagagccatttccatgtgggacaaagaaagcctccgaggtgataaaagtactgattaatgagataattcctttccctggcctgcctaagcaacttcagagagataatggcctctcattcaaggcagctgtgaccca-gcgggggggtcacaaagacactaggaatacactaccatcttcattgtgcttggagaccacaatactcaggaaagatagaaaagacaaatgatattataaaaaaagcacctcagaaaactatctccctcagactaatcttccctagactaaccttctcaccatagctctactacatatttaaaacagccctttaaagctaggtttgagtccttttgaaatgatgtatggacagccttttctcaccaatgatttcttgctagacaaataaatctctgatttgct i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16899507 1601 + 48394510 ttctggttaccagaggttactgagttaaccatagggaataacttaaccatctatactctgcataatgtgtcaggactttggttttctaaggaaagtctctggctaatggataagtgcctcctcaggtatgaagctctgctattagagggatctgcagtccaaacaagaacctgtccatccctaaattcagccaccttcctcccaggggaagctgagagcttgaacatgactgtgaacagatactagtatccagccagagagggcctctaggaaacccccttagagaacccagacaaaattatctttacaaatggaaattcttttgtaaaacaagagatccataaagcatggtatgctatagttactctgattgatatttttgagagctcggctctcttcttgggcacaagagctcaactagctgagctcattgccttcacgacagcactcaaattaagcaaagggaaaacagttaacatttacactgattctaagtatccttccctatacctccatgcccatgctgctatctggaaagagaggaactttctcatagctaatgggtctcccattaaataccaacaggaaattaattgactatcatcctcagttttcatcccataggaagtggcagtaacacaatgtaaaggcccccaaaaggaatggataaagtaactgagggaaatatgttggaagactaagcagctaagtcagcagagagagggcctcagatttctgatccacttgaagccccactgatctgggagggcctcataggagaaataaaacttcagtattctcctttggaaatagaatggggcacctcttggggttacatctttcagtcctcaggatggctacaattggaggatgccaagcttcatctactggctgccaaacaatggaaagttcttaaaagccttccccaggcctttcacctgggtaaggataaaacctttcaaatggttcagagattgttctcaggtaaaaacctgacacaaatggttaaacaggttgttaatacttgcaagatttgcctt-aaaatcatcccctcaactgaccacttctgcacccaggaacccaaaggacagcagg----ctgaggtaaaactagcaaatagatttcacccatatgtcaaaggtaagtggcatccagtaccttctagaatgaacagataccttcactaactgggtagagccatatccatgtgggacaaag--agcctctgaggtgataaaagtactgattaatgagataattccttgccttggcctgcctaagcaccttcagagagataatggcccgtcattcaaggcagctgtgaccca-g----ggggtcacaaagacactaggaatacactaccatcttcattgtgcttggagaccacaatgctcaggaaagatagaaaagacaaatgatattataaaaaaggcacctcagaaaactatctccctcagactaatcttccctagactacccttctcaccatagctctactacatatttaaaacagccctttaaagctaggtttgagtccttttgaaatgatgtatggacagccttttctcaccaatgatttcttgctagacaaataaatctctgatttgct i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4409328 1603 + 32716333 ttctggtcagcagaggttactgagttaaccatagggaataacataaccatctatactctgcataatgtggcaggactttggtcttctaaggggagtctctggctaatggataactgcctcctcaggtatcaagctctgctattagagggatctgcagtccaaacgagaagctgtccatccctaaattcagccaccttcctcccaggggaagctaagagcttgaacatgactgtgaacagatagtagtatccagccagagagggcatctaggaaacccccttagagaacccagacaaaattctctttacgaatggaaattcatttgtaaaacaagagatccataaaacatggtatgctatagttactctgattgatatttttgaaagcttgtctctctcctcgggcacaagagctcaactagctgagctcgttgccctcacgagggcactcaaattaagcaaagtgaaagcagttaacatttacactgattctaagtatccttccctagacctcaatgcccatgctgctatctggaaagagaggaactttctcacagctaatgggtctcccattaaataccaacaggaaattaattgactatcatcctcagttttcatcccataggaagtggcagtaacacaatgtaaaggcccccaaaaggaatggataaagtaactgagggaaatgggttggaagactaagcagctaagtcagcagagagagggcctcagatttctgatccacttgaagccccactgatctgggaggacctcataggagaaataaaacttcagtattctcctatggaaatagaatggggcacctcttggggatacatctttcagtcctcaggatggctacaagtggaggatgccaagcttcatctactgactgccaaacaatggaaagttcttaaaagccttcaccaggcctttcacatgggtaaggataaaacctttcaaatggtttagagattgttctcaggcaaaaacctgacacaaatggttaaacaggttgttaatgcttgcaagatttgccttaaaaatcatcccctcaactgaccacttctgcacccaggaacccaaaggacagcagg----ctgagggaaaactagcaaa-aaatttcacccatatgttaaaggtaaggggcatccagtatcttctagaatgaacagataccttcactaactgggtagagccatttccatgtgggacaaagaaagcctctgagttgataaaagtactgattaatgagagaattccttgctttggcctccctaagtaccttcagagagataatggcccctcattcaaggcagctgtgaccca-g----gaggtcacaaagacactaggaatacactaccatcttcattgtgcttggagaccacaatgctcaggaaagatagaaaagacaaatgatattattaaaaaggcacctcagaaaactatctccctcagactaatcttccctagactacccttctcaccatagctctactacatatttaaaacagccctttaaagctaggtttgagtccttttgaaatgatgtatggacagccttttctcaccaatgatttcttgctagacaaataaatctctgatttgct i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162186707 1603 - 192294377 tcctggt-accagaggttactgagttaaccacagggaataacttaaccatctatactctgcataatgttgcaggactttggtcttctaaggggagtctctggctaagggataacggcctcctcaggtatcaaactctgctattagagggatctgcagtccaaacaagaacctgtccctccctaaattctgccaccttcctcccaggggaagctgagagctggaacatgattgtgaagagatagtagtatccagccagagagggc--ctaggaaacccccttagagaaccaagacaaaattctctttacagatggaaattcttctgtaaaacaagagatccataaagctgggtgcactacagttactctgaatgacatttttgagagcacgtttctctcctagggcacaagagctcaactaactgagctcattgccctcaggagggcactcaaattaagcaaagggaaagcagttaacatttacactgattctaagtatccttccctagacctccatgcccatgctgctatctggaaagacaggacctttcccacagctaatggatctcccattaaataccatcaggaaattaattgactatcatccttggtttttatcccatgggaagtggcagtaacacaatgtaaaggcccccaaaagggatggataaagtaactgagggaaataggttggaagactaagcagctaagtcagcagagagagggcctcaggtttctgatccacttgaagccccactgatctgggagggcctcataggagaaataaaacttcaatattcccctacggaaatagaatggggcacttcttggggatacatctttcggtcctcaggatggctacaattggaggatgccaagctttacctactggctgccaaacaatggaaagttcttaaaagccttcaccaggcctttcacctgggtaaggataaaacctttcaaatggctcagagattgttctcaggtaaaaacctgacacaaatggttaaacaggttgttaatgctttcaagacttgccttaaaaatcatcccctcaactgaccgctcctgcacccaggaacccaaaggacagcagactacctgagggaaaactgacaaatagatttcacccatatgtcaaaggtaagggacatccagtaccttctagaatgaatagataccttcactaactgagtagagccat-tccatgtgggacaaagaaagcctctgaggtgataaaagtactaattaacgagataattccttgccttggcctgcctaagtaccttcagagagataatcacccctcattgaaggcagctgtcaccca-g----ggggtcacaaaggcactaggaatacactaccatcttcattgtgcttggagaccgcaatgctcaggaaagacagaaaagacaaatgatattat-aaaaaggcacatcaggaaactatctccctcagactcaccttccctagactacccttctcaccatagccttactacatgtttaaaacacccctttagcgataggtttgagtccttttgaaatgatgtatggacagccttttctcaccaatgatttcttgcaagacaaataaatctctgatttgat i macFas5.chr3 I 1 C 0 s papAnu2.chr3 150871463 1603 - 180432695 TCCTGGT-ACCAGAGGTTACTGAGTTAACCACAGGGAATAACTTAACCATCTATACTCTGCATAATGTTGCAGGACTTTGGTCTTCTAAGGGGAGTCTCTGGCTAAGGGATAACTGCCTCCTCAGGTATCAAACTCTGCTATTAGAGGGATCTGCAGTCCAAACAAGAACCTGTCCCTCCCCAAATTCAGCCACCTTCCTCCCACGGGAAGCTGAGAGCTTGAACATGATTGTGAAGAGATAGTAGTATCCAGCCAGAGAGGGC--CTAGGAAACCCCCTTAGAGAACCAAGACAAAATTCTCTTTACAGATGGAAATTCTTCTGTAAAACAAGGAATCCATAAAGCTGGGTACACTACAGTTACTCTGAATGATATTTTTGAGAGCACGTTTCTCTCCTAGGGCACAAGAGCTCAACTAACTGAGCTCATTGCCCTCACGAGGGCACTCAAATTAAGCAAAGGGAAAGCAGTTAACATTTACACTGATTCTAAGTATCCTTCCCTAGACCTCCATGCCCATGCTGCTATCTGGAAAGATAGGACCTTTCCCACAGCTAATGGATCTCCCATTAAATACCATTAGGAAATTAATTGACCATCATCCTTGGTTTTTATCCCATGGGAAGTGGCAGTAACACAATGTAAAGGCCCCCAAAAGGGATGGATAAAGTAACTGAGGGAAATAGGTTGGAAGACTAAGCAGCTAAGTCAGCAGAGAGAGGGCCTCAGGTTTCTGATCCACTTGAAGCCCCACTGATCTGGGAAGGCCTcataggagaaataaaatttcaatattcCCCTACGGAAATAGAATGGGGCACTTCTTGGGGATACATCTTTCAGTCCTCAGGATGGCTACAATTGGAGGATGCCAAGCTTTACCTACTGGCTGCCAAACAATGGAAAGTTCTTAAAAGCCTTCACCAGGCCTTTCGCCTGGGTAAGGATAAAACCTTTCAAATGGCTCAGAGATTGTTCTCAGGCAAAAACCTGACACAAATGGTTAAACAGGTTGTTAATGCTTTCAAGACTTGCCTTAAAAATCATCCCCTCAACTGACCGCTCCTGCACCCAGGAACCCAAAGGACAGCAGACTACCTGAGGAAAAACTGACAAATAGATTTCACCCATATGTCAAAGGTAAGGGACATCCAGTACCTTCTAGAATGAATAGATACCTTCACTAACTGAGTAGAGCCAT-TCCATGTGGAACAAAGAAAGCCTCTGAGGTGATAAAAGTACTAATTAACGAGATAAttccttgccttggcctccctatgTACCTTCAGAGAGATAATCACCCCTCATTCAAGGCAGCTGTCACCCA-G----GGGGTCACAAAGGCACTAGGAATACACTACCATCTTCATTGTGCTTGGAGACCACAATGCTCAGGAACGacagaaaagacaaatgatattAT-AAAAAGGCACCTCAGGAAACTATCTCCCTCGGACTCACCTTCCCTAGACTACCCTTCTCACCATAGCCTTACTACATGTTTAAAACACCCCTTTAGCGATAGGTTTGAGTCCTTTTGAAATGATGTATGGACAGCCTTTTCTCACCAATGATTTCTTGCAAGACAAACAAATCTCTGATTTGAT i papAnu2.chr3 I 1 C 0 s chlSab2.chr2 14972181 1604 - 90373283 tcctggt-accagaggttactgagttaaccacagggaataacttaaccatctatactctgcataatgttgcaggactttggtcttccaaggggagtctctggctaagggataactgcctcctcaggtatccaactctgctattagagggatctgcagtccaaacaagaacctgtccctccctatattcaaccaccttcctcccaggggaagctgagagcttgaacatgattgtgaagagatagtagtatccagccagagagggc--ctaggaaacccccttagagaaccaagacaaaattctctttacagatggaaattcttcggtaaaacaagggatccataaagctgggtacactacagttactctgaatgctatttctgagagcacgtttctctcctagggcacaagagctcaactaactgagctcattgccctcacgagggcactcaaattaagcaaagggaaagcagttaacatttacactgattctaagtatccttccctagacctccatgcccatgctgctatctggaaagacaggacctttcccacagctaatggatctcccattaaataccatcaggaaattaattgactatcatccttggttttcatcccatgagaagtggcagtaacacaatataaaggcccccaaaagggatggataaagtaactgagggaaataggttggaagactaagcagctaagtcagcagagagagggcctcaggtttctgatccacttgaagccccactgatctgggagggcctcataggagaaataaaacttcaatattcccctatggaaatagaatggggcacttcttggggatacatctttcagtcctcaggatggctacaagtggaggatgccaagctttacctactggctgccaaacaatggaaagttcttaaaagccttcaccaggcctttcgcctgggtaaggataaaacctttcaaatggctcagagattgttctcaggtaaaaacctgacacaaatggttaaacaggttgctaatacttgcaagacttgccttaaaaatcatcccctcaactgaccgctcctgcacccaggaacccaaaggacagcagactacctgagggaaaactggcaaatagatttcacccatatgtcaaaggtaagggacatccagtaccttctagaatgaatagataccttcactaactgagtagagccat-tccatgtgggacaaagaaagcctctgaggggataaaagtactaattaacgagataattccttgccttggcctctctaagtaccttcagagagataatcacccctcattcaaggcagctgtcacccagg----ggggtcacaaaggcactaggaatacactaccatctccattgtgcttggagaccgcaatgctcaggaaagacagaaaagacaaatgatattat-aaaaaggcacgtcaggaaactatctccctcggactcaccttccctagactacccttctcaccatagccttactacatgtttaaaacacccctttagcgataggtttgagtccttttgaaatgatgtatggacagccttttctcaccaatgatttcttgcaagataaataaatctctgatttgat i chlSab2.chr2 I 25 I 13 e calJac3.chr21 21891903 10705 + 50472720 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e rheMac3.chr3 168514602 16250 - 198365852 I a score=9451.000000 s hg38.chr21_KI270874v1_alt 38226 18 + 166743 agacaaataaatctctga s panTro4.chr21 3651082 18 + 32799110 agacaaataaatctctga i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16901108 18 + 48394510 agacaaataaatctctga i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4410931 18 + 32716333 agacaaataaatcaccga i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162188310 13 - 192294377 ---taaatgtatatct-- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150873066 13 - 180432695 ---Taaatgtatatct-- i papAnu2.chr3 C 0 C 0 e calJac3.chr21 21891903 10705 + 50472720 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e rheMac3.chr3 168514602 16250 - 198365852 I e chlSab2.chr2 14973785 13 - 90373283 I a score=1191151.000000 s hg38.chr21_KI270874v1_alt 38244 681 + 166743 tctttggcccatttccaacaggaactggagcaactgtcagaggcccaatcccatgaatttgggccacttctattcaacccaggggacctagtactgatgaaggtacttccttcccttcctccctctataaacccagattggaagggactttacgctgtacttgtttccactcctacagcactgaaagtcactgga-------atat-------gttcttggatttattatacccaagtaaaggcctggaaagctcacagagttacctccatcaacccagaagaccaccgaaagtaacaatgtgaagagatcagagatctcaagttaataattttttaa-aaagtgttaataattagcctttcaggtatattctctttatagtcttgcctatgcttgctgttgttaccttcgttctattgtataccacaggTTAAAAATGGtgatttcagaatgattagtatatttcacttatttctgtaatctttggcacaaaattctttccttttaactcctctttgtgtaatacacatatttgatccacacatacttaactttgtaaaacttgttttttcttgcctagaggccatcaaactccaagctatc-aaacaaccggagcctcagacaatggttcccttttgctggggacctctgggaggaatctgactgctgttctgcctaaaa-caaCaccccctgtca s panTro4.chr21 3651100 682 + 32799110 tctttggcccatttccaacaggaactggagcaactgtcagaggcccaatcccatgaatttgggccacttctattcaacccaggggacctagttctgatgaaggtacttccttcccttcctccctctataaacccagattggaagggactttacgctgtacttgtttccactcctacagcactgaaagtcactgga-------ctat-------gttcttggatttattatacccaagtaaaggcctggaaagctgacagagttacctccatcaacccagaagaccaccgaaagtaccaatgtgaagagatcagagatctcaagttaacaattttttaa-aaagtgttaataattagcctttcaggtatattctctttatagtcttgcctatgcttgctgttgttaccttcgttctattgtataccacaggttacaaatggtgatttcagaatgattagtatatttcacttatttctgtaatctttggcacaaaattctttccttttaactcctctttgtataatacacatatctgatccacacatacttaactttgtaaaacttgttttttcttgcctagaggccatcaaactccaagctatc-aaacaaccggagccgcagacaatggttcccttttgctggggacctctgggaggaatctgactgctgttctgcctaaaaACAACaccccctgtca i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16901126 680 + 48394510 tctttggcccatttccaacaggaactggagcaactgtcagaggcccaatcccatgaatttgggccacttctattcaacccaggggaccaagtactgatgaaggtacttccttcccttcctccctctataaacccagattggaagggactttatgctgtacttgtttccactcctacagcactgaagttcactgga-------gtat-------gttcttggatttattatacccaagtaaaggcctagaaagctgacagagttacctccatcaacccagaagaccacccaaagtaccaatgtgaagaggtcacagatctcaagctaataattttttaa-aaagtgttaataattagcctttcaggtatattctctttatagtcttgcctatgcttgctgttgttaccttcattctattttataccacaggTTACAAATGGtgctttcagaatgattagtatatttcacttatttctgtaatctttggcacaagattctttccttttaactcctctttgtataatacacatatttgatccacacatagttaactttgtaaaacttgttttttcttgcctagaggccatcaaactccaagctatc-aaacaaccagagcctcagaaaatggttcccttttgctggggacctctgggaggaatctgactgctgttctgcctaaaa-caacaccccc-gtca i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4410949 674 + 32716333 tctttggcccatttccaacaggaactggagcaatggtcagaggcccaatcccatgaatttgggccacttctattcaacccaaa-----tagtactgatgaaggtacttgcttcccttcctccctctataaacccagattggaagggattttatgctgtacttgtttctactcctacagcactgaaggtcactgga-------atat-------gttcttggatttattatacccaagtaaaggcctggaaagctgacagagttacctccgtcaacccagaagaccacccaaagtaccaatgtgaagagaacagagatctcaagctaaaaa-ttaaaaa-aaagtgttaataattagcctttcagctatattctctttatagtcttgcctatgcttgctgttgttaccttcgttGTACTGTATACGACAGGTTACAAATGGtgctttcagaatgattagtatatttcacttatttctgcaatctttggcacaagattctttccttttaactcctctttgtataatacacatatttgatccacacatacttaacttggtaaaacttgtttcttcttgcctagaggccatcaaactccaagctgtc-aaacaaccagagcctcagccaatggttcccttttgctggggacctctgggaggaatctgactgctgctctgcctaaaa-caacaccccc-gtca i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162188323 695 - 192294377 tctttggcccacttccaacaggaactggagcaactgtcggaggcctaatcccattcacttgggccacttctattcaacccaggggacctagtactgatgaaggttcttcctttccttcctccctctataaacccagataggaagggactttatgctgtacttatttctactcctacagccctgaaggtcactggatttggttatataaatctagctcttggatttattatatccaagtaaaggcctggaaagctgacagagttacctccatcaacccagaagaccacccaaagtaccaacgtgaagagatcagagatctcaagctaaaaattttaaaactaagtgttaataattagcctttcaggtatattctctttggagtcttgcctatgcttgctgttgttaccttcattctattgtataccacagggTA-Aaatgttgctttcagaatgattagtatatttcacttatttctgcattctttggcacaagattctttccttttaactcctctttgtataatacacatatttgatccacacatacttaactttgtaaaagttgtttcttcttgcctagaggtcatcaaactccaagttgtc-aaacaaccggagcctcagacaatggtttccttttgctggggacctctgggaggaatctgactgctgttctccctaaaa-caacatcccctgtca i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150873079 697 - 180432695 tctttggccCACTTCCAACAGGAACTGGAGCAACTGTCGGAGGCCTCATCCCATTAACTTGGGCCACTTCTATTCAACCCAGGGGACCTAGTACTGATGAAggttcttcctttccttcctctctctataAACCCAGATAGGAAGGGACTTTATGCTGTACTTATTTCTACTCCTACAGCACTGAAGGTCACTGGATTTGGTTATATAAATCTAGCTCTTGGATTTATTATATCCAAGTAAAGGCCTGGAAAGCTGACAGAGTTACCTCCATCAACCCAGAAGACCACCCAAAGCACCAACGTGAAGAGATCAGAGATCTCaagctaaaaattttaaaacgaaGTGTTAATAATTAGCGTTTCAGGTATATTCTCTTTAGAGTCTTGCCTATGCTTGCTGTTGTTACCTTCATTCTATTGTATACCACAGGGTACAAATGTTGCTTTCAGAATGATTAgtatatttcacttatttctgtattctttggcacaagattctttccttttaacTCCTCTTTGTATAATACACATATTTGATCCACACATACTTAACTTTGTAAAAGTTGTTTCTTCTTGCCTAGAGGTCATCAAACTCCAAGTTGTCAAAACAACCGGAGCCTCAGACAATGGTTTCCTTTTGCTGGGGACCTCTGGGAGGAATCTGACTGCTGTTCTCCCTAAAA-CAACATCCCCTGTCA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14973798 695 - 90373283 tctttggcccacttccaacaggaactggagcaactgttggaggcctaatcccattaacttgggccacttctattcaactcagggga-ctagtactgatgaaggttcttcctttccttcctctctctataaacccagataggaagggagtttatgctgtacttatttctacttctacagcactgaaggtcactggatttgtttatataaatccagctcttggatttattatatccaagtaaaggcctggaaagctgacagagttacctccatcaacccagaagaccacccaaagtactaacgtgaagagatcagagatctcaagctaaaaatttaaaaactaagtgttaataattagcctttcaggtatattctctttatagtcttgcctatgcttgctgttgttaccttcattctattgtataccacagggTACAaatgttgctttcagaatgattagtatatttcacttatttctgtattctttggcacaagattctttccttttaactcctctttgtataatacacatatttgatccacacatacttaactttgtaaaagttgtttcttcttgcctagaggtcatcaaactccaagttgtc-aaacaaccggagcctcagacaatggttcccttttgctggggacctctgggaggaatctgactgctgttctccctaaaa-caacatcccttgtca i chlSab2.chr2 I 13 C 0 e calJac3.chr21 21891903 10705 + 50472720 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e rheMac3.chr3 168514602 16250 - 198365852 I a score=11102986.000000 s hg38.chr21_KI270874v1_alt 38925 4853 + 166743 ccaaaaagcctgacaccatgacccaaagtgagaacttatatcattgttttcctgctctaatgttgccttttccaaaaccactcatgttctgtcccacccccatcctgtacagataaaaatcccaggctcagccaacaaaagaggagaagcagctggacgtcagagactatggttgcatgtcggagagaagcagcttaactttaaagagagagcttgatggtgtcacttcagagaggagtctggccagggatggtcagacttcaagggaggattgcctccccaccctgtccccttttcaact-cccatcccactaagagtgactttcatcagcaatataatcc---cctgcatttaccatcttcaattcattcatgcaacctcatgtttcctggatgccagaaaagagctcagagccacaaatgt-ggtgcaaaaggctgtc-acactgaccctccattgagctgttaacactaaagccatccacagatggcaaagctaaaagtc-----------------------------------cactgtaacagtcattctggggcttcaggggttgtgagcacccttcaagatggtgccatg------------agtttttctcctattggtgcccaaaagcactcaccctggtttctgcacccactcacctgcatactccctcttgtgaggggttgagaactgtgggatgagtaagtgaggcactcctgtcatgaggcccatgaaggggtcagagaaatatcctgcttcaaaattaataactcaacatcttttacagtagttgcaaaaaaaaaa-gaaaaaag-aaaaaaaaa-cttaagaatacatctaaccaaagaggtgaaagaccactacaaggaaaactacaaaacactgctgaaagaattcatagatgacacaaacaaatggaaacatatcccatgttcatggatgggtagaatcaatattgtgaaaatgatcatactgtcaaaagcaatctagaaattcaatgcaattctcataaaaataccatcatcattcttcacacaactagaaaaagcaatcctaaaattcacatggaaccaaaaaagagttcacatactcaaag----agtaagcaaaaagaacaagtccggaggcatcacattacatgacttcaaactataatgtaatgccatagtcaccaaaacagcaaggtactggtataaaagtaggcacaaagaccaatggaacaggatagagaggacagaaataaagcaaaatacatatagccaaccaatctttgacaaagcaaacaaaaacataaagtggggaaaggacaccctattcaacaaatggtgctgggataattggcaagccacatgtag-agaatgaaactggatcctcatctctcaccttatgcaaaatcaactcaagatggatcaaacacttaaatctaagacctcaaaccataaagattctagaagataacattggaagaacccttctatacattggcttaggcaaagacttcctgacttagaacacaaaagcaaatgcaacaaaaacaaagataaatagaaggagc----ttaaactaaaaatcttcttcacagcaaaagaaataatcctcagagtaaacagacaacccacagagtgggaaaaattctttgcaaactgtgcatctgacaaagaactaat-tccagaatctacaaagaactcaaacgaatcagaaagaaaaaaaa-caa---acaatcccatcaaaaagtgggcaattgacatgaatagataattctcaattttggccatatacaatggtcatat-----------------acatataaaaaatgctcaacatcactaattttcaggaaaatgcaaatcaaaaccacattgccataccataccaccttactcctacaagaatggccataatttaaaattc-aaaaattgtaaattttggtatagatgtggtgaaaagcaaacacttttacactgctgttgggaatgtaaactagcacaaccactatggaatacagtatggaaagcccctgaagaactaaaaatagatctaccacttgatacagcaattctactactgggtatctactcagaggaaaagaagtcatgatatcaacaagacacttgcacacacctgtttgtgacagcacattcacaattgcaaaaatatggaaccagcccaaatgcccatcgatcaacaagtggtaaagaaaatgtggtatgtatatatcatggaatactactcagtcatataatggaataaaataatggcatttgcagcaacctggatatagttggagaccattattctaagtgaattaactcaggaatggaaaactaaacatcatatgttctcacttgtatgtgggagctaagctatgaggatgcaaaggcatatgaaagatacaatggactttggggactc---aggaagggagagggggtgagggataaaagactacacattgggtgcagtgtacactgcttggatgatgagtgcaccaaaatctcagaaatcaccactaaagaacttgtttacataaccagacaccacctgttccccaaaaacctatttgaaataaaaaTAATACttgaaataaacttaaaaaggaataaatggaagggcattaatgtatggattggaagacttagtactgttgcaatagcaatactccccaaattgatctatagattcaatgcaattcttatgaaagtgtcagctgccttttt-tagaaattggcaaaaagatcttaagattcacatggatgcaagggacccagaatagctaaaacaatctctaaaaggaaggacaaagttggaggactcccatttccaatttccaaacttaatacaaagtgcccataatcaatatagtatggtacttgcataaggacagacatacaggtcaatggaatgaaattttgaatccaaaaatgcacccttctatttatggtgaattgattttcacaagggtaccaaagaagttcaatgagcaaaaatacatctttaaaaaaagacactaagacaactggatataatgcacaagaatgaaattgggctcctatctcacacaatatataagcattaatttttt-taagaagagcagagtatgaagtatgagagttaaaactataaaactcttagaagtcaacatagtagtaaatctttgtgaccttgaattaggcaatgattttctagttatgaaaccaaaagcaataataaacagataaaattacactttatcaaagtatttttgcatttcaaaggaaaacatgaagaaagtgaaaaaacccacagaatgggagcattatttgcaaattgtatatctgataggagatttgtatccagaatatttaaagaattcttgtaactcaacaacaaaaagacaaataacccaatttaaaaatagacaaagaatttcaatagctatttctgcaatatacaagtggtcaataagcacatgaaaagatacttaacatcattaatcattagggaaatgcaaattaaaacaacaatgagatacaaatttgcacatactaagatggttataatcaaaaggacagacagtgacaagaattagtgaggataattgaaaccttcatacaatgctggtggaaattttaaattatgcagccacttttgaaaacaatgtgtcagctcctt--aaaaaaagttaaacacaaagttaccatttgatcaagcagtttcactccta-agtatataatcaagagaattaaaagcacatgtctacacaaaatcttgcagagaaatgtcatagcagcattattcataatagaccacaagtggaaacaatccaaatgtccatcaactgatgaatggataaataaaatgtgtcagatccatacaatgaaatattattcagcaatgaaaagaaatgaaatgtaatacatgttataacatggatgacctttaaaacattatgctaagtaaaagaggccagaaacaaaaaggccacatattgtatgaatccttttatatacaaggtagagtaggtaaatccataaagacaaaaagtcattcagtggttgccaggacctaggaggtatgggagaatggagagaattgctaaagggcatgagctttcctttgggatgataaaaatattctTTT-------AAAAAAACTGtatgag----gtacaagttcaattttattacatgcataaattatgttgtggtgaagtcaaggctttcagggtattcatcacccaaataatgtacattgtatccattaggtaatttctcatcatccacccttctctt-accctttcacccttccaaggcaccattgtctatcatcccccactctacgtccatgtatacacattatttaactc-----------ccacttataagtgagaacatgcaatatttgtctttctatatctgacttgtttcacttaaggaaatgacctccagtcctatccatgttgctgcaaatgacgtaatttttttaatggatgagtagtattccattgtgtatatataccacattttttatccaatcatctgttgat-agacacatagattgattccatatctttgctattgtgaatagtgccacaataaacatacaagtgcaagtatctttttgatatcattacttattttctcttgagtatatacccagtattgcaattgctgaatccaatggtagctttgtatttagttctttgagaaatcttcatactgttttctatagaggttgaactaatttatattcccaccaacaacatataagagttcccttatctccacatactcaccaacatctatta---ttttttgactttttaatagtaaccattctgactagaataagatgatatcttgttgtagctataattt-gatttct-tgctaattagcgaAgggatgataaaaatattctaaaattagatactgatgatgcttgcacaaccctgtgaatatacactgcaaaagg s panTro4.chr21 3651782 4857 + 32799110 ccaaaaagcctgacaccatggcccaaagtgagaacttatatcattgttttcctgctctaatgttgccttttccaaaaccactcatgttctgtcccacccccatcctgtacagataaaaatcccaggctcagccaacaaaagaggagaagcagctggacgtcagagactatggttgcatgtcggagagaagcagcttaactttaaagagagagcttgatggtgtcacttcagagaggagtctggccagggatggtcagacttcaagggaggattgccttcccaccctgtccccttttcaact-cccatcccactaagagtgactttcatcagcaatataatcc---cctgcatttaccatcttcaattcattcatgcaacctcatgtttcctggatgccagaaaagagctcagagccacaaatgt-ggtgcaaaaggctgtc-acactgaccctccattgagctgttaacacttaagccatccacagatggcaaagctaaaagtc-----------------------------------cactgtaacagtcattctggggcttcaggggttgtgagcacccttcaagatggtgccatg------------agttttgctcctattggtgcccaaaagcactcaccctggtttctgcacccactcacctgcatactccctcttgtgaggggttgagaactgtgggatgagtaagtgaggcactcctgtcatgaggcccatgaaggggtcagagaaatatcctgcttcaaaattaataactcaacatcttttacagtagttgcaaaaaaaaaaagaaaaaag-aaaaaaaaaacttaagaatacatctaaccaaagaggtgaaagaccactacaaggaaaactacaaaacactgctgaaagaattcatagatgacacaaacaaatggaaacatatcccatgttcatggatgggtagaatcaatattgtgcaaatgatcatactgtcaaaagcaatctagaaattcaatgcaattctcataaaaataccatcatcgttcttcacacaactagaaaaagcaatcctaaaattcacatggaaccaaaaaagagctcacatactcaaagtaagagtaagcaaaaagaacaagtccggaggcatcacattacatgacttcaaactataatataatgccatagtcaccaaaacagcaaggtactggtataaaagtaggcacaaagaccaatggaacaggatagagaagacagaaataaagcaaaatacatatagccaaccaatctttgacaaagcaaacaaaaacataaagtggggaaaggacaccctattcaacaaatggtgctgggataattggcaagccacatgtag-agaatgaaactggatcctcatctctcaccttatgcaaaatcaactcaagatggatcaaacacttaaatctaagacctcaaaccataaagattctagaagataacattggaagaacccttctatacattggcttaggcaaagacttcctgacttagaacacaaaagcaaatgcaacaaaaacaaagataaatagaaggagc----ttaaactaaaaatcttcttcacagcaaaagaaataatcctcagagtaaacagacaacccacagagtgggaaaaattctttgcaaactgtgcatctgacaaagaactaat-tccagaatctacaaagaactcaaacgaatcagaaagaaaaaaaaacaa---acaatcccatcaaaaagtgggcaattgacatgaatagataattctcaattttggccatatacaatggtcatat-----------------acatataaaaaatgctcaacatcactaattttcaggaaaatgcaaatcaaaaccacattgccataccataccaccttactcctacaagaatggccataatttaaaattc-aaaaattgtaaattttggtatagatgtggtgaaaaggaaacacttttacactgctgttgggaatgtaaactagcacaaccactatggaatacagtatggaaagtccctgaagaactaaaaatagatctaccacttgatacagcaattctactactgggtatctactcagaggaaaagaagtcatgatatcaacaagacacttgcacacacctgtttgtggcagcacattcacaattgcaaaaatatggaaccagcccaaatgcccatcgatcaacaagtggtaaagaaaatgtggtatgtatatatcatggaatactactcagtcatataatggaataaaataatggcatttgcagcaacctggatatagttggagaccattattctaagtgaattaactcaggaatggaaaactaaacatcatatgttctcacttgtatgtgggagctaagctatgaggatgcaaaggcatatgaaagatacaatggactttggggactc---aggaagggagagggggtgagggataaaagactacacattgggtgcagtgtacactgcttggatgatgagtgcaccaaaatctcagaaatcaccactaaagaacttgtttacataaccagacaccacctgttccccaaaaacctatttgaaataaaaaTAATACttgaaataaacttaaaaaggaataaatggaagggcattaatgtgtggattggaagacttagtattgttgcaatagcaatactccccaaattgatctatagattcaatgcaattcttatgaaagtgtcagctgccttttt-tagaaattggcaaaaagatcttaagattcacatggatgcaagggacccagaatagctaaaacaatctctaaaaggaaggacaaagttggaggactcccacttccaatttccaaacttaatacaaagtgcccataatcaatatagtatggtacttgcataaggacagacatacaggtcaatggaatgaaaatttgaatccaaaaatgcacccttctatttatggtgaattgattttcacaagggtaccaaagaagttcaatgagcaaaaatacatctttaaaaaaagacgctaagacaactggatataatgcacaagaatgaaattgggctcctatctcacactatatataagcattaatttttt-taaaaagagcagagtatgaagtatgagagttaaaactataaaactcttagaagtcaacatagtagtaaatctttgtgaccttgaattaggcaatgattttctagttatgaaaccaaaagcaataataaacagataaaattacaatttatcaaagtatttttgcatttcaaaggaaaacatgaagaaagtgaaaaaacccacagaatgggagcattatttgcaaattgtatatctgataggagatttgtatccagaatatttaaagaattcttgtaactcaacaacaaaaagacaaataacccaatttaaaaatagacaaagaatttcaatagctatttctgcaatatacaagtggtcaataagcacatgaaaagatacttaacatcattaatcattagggaaatgcaaattaaaacaacaatgagatacaaatttgcacatactaagatggttataatcaaaaggacagacaatgacaagcattagtgaggataattgaaaccttcatacaatgctggtggaaattttaaattatgcagccacttttgaaaacaatgtgtcagctcctt--aaaaaaagttaaacacaaagttaccatttgatcaagcagtttcactccta-agtatataatcaagagaattaaaagcatatgtctacacaaaatcttgcagagaaatctcatagcagcattattcataatagaccacaagtggaaacaatccaaatgtccatcaactgatgaatggataaataaaatgtgtcagatccatacaatgaaatattattcagcaatgaaaagaaatgaaacataatacatgttataacatggatgacctttaaaacattatgctaagtaaaagaagccagaaacaaaaaggccacatattgtatgaatccttttatatacaaggtagagtaggtaaatccataaagacaaaaagtcgttcagtggttgccaggacctagaaggtatgggagaatggagagaattgctaaagggcatgagctttcctttgggatgataaaaatattctTTT-------AAAAAAACTGtatgag----gtacaagttcaattttattacatgcataaattatgttgtggtgaagtcaaggctttcagggtattcatcacccaaataatgtacattgtatccattaggtaatttctcatcatccacccttctctt-accctttcacccttccaaggcaccattgtctatcatcccccactctacgtccatgtatacacattatttaactc-----------ccacttataagtgagaacatgcaatatttgtctttctatatctgacttgtttcacttaaggaaatgacctccagtcctatccatgttgctgcaaatgacataatttttttaatggatgaatagtattccattgtgtacatataccacattttttatccaatcatctgttgat-agacacatagattgattccatatctttgctattgtgaatagtgccacaataaacatacaagtgcaagtatctttttgatatcattacttattttctcttgagtatatatccagtattgcaattgctgaatccaatggtagctttgtatttagttctttgagaaatcttcatactgttttctatagaggttgaactaatttatattcccaccaacaacatataagagttcccttatctccacatactcaccaacatctatta---ttttttgactttttaatagtaaccattctgactagaataagatgatatcttgt---agctataattt-gatttct-tgctaattagtgaAgggatgataaaaatattctaaaattagatactgatgatgcttgcacaaccctgtgaatatacactgcaaaagg i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16901806 4871 + 48394510 ccaaaaagcctgacaccatggcccaaagtgagaatttatatcattgttttcctgctctaatgttgccttttccaaaaccactcatgttctgtcccacccacatcctgtacagataaaaatcccaggctcagccaacaaaagaggagaagcagctggacgtcagagactatggttgcatgttggagagaagcagcttaacttcaaagagagagcttgatggtgtcacttccaacaggagtctggccagggatggtcagacttcaagggaggattgttttcccaccctgtccccttttcaactccccatcccactaagagtgactttcatcagcaatataatcc---cctgcatttaccatcttcaattcattcatgcaacctca--tttcctggatgccagaaaagagctcagagccacaaatgt-ggtgcaaaaggctgtc-acactgaccctccattgagctgttaacacttaagccatccacagatggcaaagctaaaagtc-----------------------------------cactgtaacagtcattctggggcttcaggggttgtgagcacccttcaagatggtgccatg------------agttttgctcctgctggtgcccaaaagcactcaccctggtttctgcacccactcatctgcatgctccctcttgtgagaggttgagaactgtgggatgagtaagtgaggcactcctgtcatgaggcccatgaaggggtcagagaaatatcctgcttcaAAATTTATAAACcaacatcttttacagtagttgcaaaaaaaaaa----aaaag-aaaaaaaaa-cttaggaatacatctaaccaaagaggtgaaagaccactataaggaaaactacaaaacactgctgaaagaattcatagatgacacaaacaaatggaaacatatcacatgttcatgaatgggtagaatcaatattttgaaaatgatcatactgtcaaaagcaatctagaaattcaatgcaattctcataaaaataccatcatcattcatcacacaactagaaaaagcaatcctaaaattcacatggaaccaaaaaagagctcacatactcaaagtaagactaagcaaaaagaacaaatctggaggcatcacattacatgacttcaaactatactataatgccatagtcaccaaaacagcaagctactggtataaaaataagcacaaagcccaatggaactggatagagaagacagaaataaagcaaaatacatatagccaaccaatctttgacaaagcaaacaaaaacataaagtggggaaaggacaccctattcaacaaatggtgctgggataattggcaagccacatgtagaagaatgaaactggatcctcatctctcaccttatacaaaatcaactcaagatggatcaaacacttaaatctaagacttcaaaccataaaggttctagaagataacattggaagcacccttgtatacattggcttaggcaaagacttcctgacttagaacacaaaagcaaatgcaacaaaaacaaagataaatagaaggagc----ttaaactaaaaaccttcttcacagcaaaagaaataatcatcagagtaaacagacaacccacagagtgggaaaaattctttgcaaactgtgcatctgacaaagaactaat-tccagaatctacaaagaactcaaacaaatcagaaagaaaaaaaa-caa---aaaatcccatcaaaaagtgggcaattgacatgaataggtaattctcaattttggccatatacaatggccatatacaaatggcc--aaaaaacatataaaaaatgttcaacatcactaattttcaggaaaatgcaaatcaaaaccacaatgccgtaccataccaccttactcctacaagaatggccataattaaaaattc-aaaaattttaaattttggtatagatgtggtgaaaagggaacacttttacagtgctgttgggaatgtaaactagcacaaccactatggaatacagtatggaaagtccctaaagaactaaaaatagatctaccgtttgatacagcaattccactactgggtatctactcagaggaaaagaagtcatgatatcaacaagacacttgcacacacctgtttatggcagaacattcacaattgcaaaaatatggaaccagcccaaatgcccatcaatcaacaagtggtaaagaaaatgtggtatgtatatatcatggaatactactcagtcatataatggaataaaataatggcatttgcagcaacctggatatagttggagaccattattctaagtgaattaactcaggaatggaaaactaaacattgtatgttctcacttgtaagtgggagctaagatatgaggatgcaaaggcacatgaaagatacaatggactttggggactc---gggaagggagagggggtgagggataaaagactgaacattgggtgcagtgtacgctgcttggatgatgagtgcaccaaaatctcagaaatcaccactaaagaacttgttcacataaacagacaccacctgttccccaaaaacctatttgaaataaaaagaataattgaaataaacttaaaaaggaataaatggaagggcattaatgtatggattggaagacttagtattgttgcaatagcgatactccccaaattgatctatagattcaatgtaattcttatgaaagtgtcagctgccttttt-tagaaattggcaaaaagatcttaagattcatatggatgcaagggacccagaatagctaaaacaatctctaaaaggaaggacaaagttggagaactcccatttccaatttccaaacttaatacaaagtgcccataatcaatatagtatggtacttgcataaggacagacatacaagtcaatggaatgaaattttgaatccaaaaatgcacccttctatttatggggaattgattttca-aagggtaccaaagatgttcaatgagcaaaaattcatctttaaaaaaagacactgagacaactggatataatgcacaagaatgaaattgggatcctatctcacactatatataagcattaa-ttttt-taaaaagagcagagtatgaagtatgagagttaaaactataaaactgttagaagtcaacatagtagtaaatctttgtgaccttgaattaggcaatgattttctagttatgaaaccaaaagcaataataaacagataaaattacactttatcaaagt-cttttgcatttcaaaggaaaacatgaagaaagtgaaaaagcccacagaatgggagcattatttgcaaattgtatatctgataggagatttatatccagaatatttaaagaattcttgtaactcaaaaacaaaaagacaaataacccaatttaaaaatagacaaagaatttcaatagctatttctgcaatatacaagtggtcaataagcacatgaaaagatatttaacatcattaatcattagggaaatgcaaattaaaacaacaatgagatacaaatttgcacatactaagatggttataatcaaaaggacagacaatgacaagcattggtgaggataattgaaaccttcatgcaaagctggtggaaattttaaattatgcagccacttttgaaaacaatgtgtcagttcctt--aaaaaaagttaaacacaaagttaccatttgatc-agcagtttcactcctagagtatataaccaagagaatgaaaagcatatgtgtacacaaaatcttgcagagaaatgtcatagcagcattattcataacagaccacaagtggaaacaatccaaatgtccatcaattgatgaatggataaataaaatgtgtcagatccatacaatgaaatattattcagcaatgaaaagaaatgaaatgtaatacatgttataacatggatgacctttaaaacattatgctaagtaaaagaggccagaaacaaaaaggccacatattgtatgaatccttttatatacaaggtagagtaggtaaatccataaagacaaaaagtcaatcagtggttgccaggacctaggaggtatgggagaatggagagaattgctaaagggcatgaactttcctttgggatgataaaaatattcttta-------aaaaaaaatgtatgag----gtacaagttcaattttattacatgcataaattatgttgtggtgaagtcaaggctttcaggttattcatcatccaaataatgtacattgtatccattaggtaatttctcatcatccacccttctctt-accctttcatccttccaaggcaccattgtctatcatcccacactctacatccacgtgtacacgttatttaactcccacttataagccacttataagtgagaacatgtaatatttgtctttctatatctgacttgtttcacttaaggaaatgacct-cagttctatccatgttgctgcaaatgacataatttttttaatggatgaatagtattccatt-tgtatatataccacattttttatccaatcatctgttgat-agacacatagattgattccatatctttgctattgtgaatagtgccataataaacacacaagtgcaaatatctttttgatatcattacttattttctcttgagaatatacccagtattgcaattgctgaatccaatggtagctttgtatttagttctttgagaaatcttcatactgttttctatagaggctgaactaatttatactcctgccaacaacatataagagttcccttatctccacatgctcaccaacatctatta---ttttttgacttttaaatagtaaccattctgattagaataagatgatatcttgttgtagctataattt-gatttct-tgc----tagtgaagggatgataaaaatatcctaaaattagatactgatgatgcttgcacaaacctgtgaatatatactgcaaaagg i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4411623 4854 + 32716333 ccaaaaagcctgacaccatggcccaaagtgagaacttatatcattgttttcctgctctaatgttgccttttccaaaaccactcatgttctgtcccacccccatcctgtacagataaaaatccccggctcagccaacaaaagaggagaaacagctggacgtctgagactatggttgcatgtcagagagaagcagcttaacttcaaagacagagcttgatggtgtcacttcagagaggagtctggccagggatggtcagacttcaagggaggattgccttcccaccctgtcccctttccaactccccatctcactaagagcgactttcatcagcaatataatcc---cctgcatttaccatcttcaattcattcatgcaacctcatgtttcctggatgccagaaaagagctcagagacacaaatgt-ggtgcaaaaggctgtc-acactgaccctccattgagctattaacacttaagccatccacagatggcaaagctaaaagtc-----------------------------------cactgtaacagtcattctggagcttcaggggttgtgagcacccttcaagatggtgccatg------------agttttcctcctgctggtgcccaaaagcactcaccctggtttctgcacccactcacctgcatgctccctcttgtgaggggttgagaactgtgggatgagtaagtgaggcactcctgtcatgaggcccatgaaggggtcagagaaatatcctgcttcaaaattaataa--caacatcttttacagtagtcgcaaaaagaaaa------aag-aaaaaaaaaacttaggaatacatctaaccaaagaggtgaaagaccactacaaggaaaactacaaaacactgctgaaagaattcatagatgacacaaacaaatggaaacatatcccatgttcatggatgggtagaatcaatattgtgaaaatgatcatactgtcaaaagcaatctagaaattcaatgcaattctcataaaaataccatcatcattcttcacacaactagaaaaagcaatcttaaaattcacatagaaccaaaaaagagctcacatactcaaagtaagactaagcaaaaagaacaaatccggaggcatcacattacatgacttcaaactatactctaatgccatagtcaccaaaacagcaaggtattggtataaaaataggcacaaagaccaatggaacaggatagagaagacagaaataaagcaaaatacataaagccaaccaatctttgacaaagcaaacaaaaacataaagtggggaaaggacaccctattcaacaaatggtgctgggataattggcaagccacatgtggaagaatgaaactggatcctcatctctcaccttatacaatatcaactcaagatggatcaaacacttaaatctaagacctcgaaccataaagattctagaagataacattgggag-acccttctatacattggtttaggcaaagacttcctgacttagaacacaaaagcaaatgcaacaaaaacaaaaataagtagaaggagc----ttaaactaaaaaccttctttacagcaaaagaaataatcatcagagtaaacagacaactcacagagtgggaaaaattctttgcaaac--tgcatctgacaaagaactaatatccagaatctacaaagaactcaaacaaatcagaaagaaaaaaa--caa---acaatcccatcaaaaattgggcaatggacgtaaatagataattctcaattttggccatatacaagggccatatacaaatggcc-aaaaaaacatataaaaaatgctcaacatcactaattttcaggaaaatgcaaatcaaaaccacaatgccataccataccaccttactcctacaaggatggtcataattaaaaattc-aaaaattataaattttggtatagatgtggtgaaaagggaacacttttacactgctgttgggaatgtaaactagcacaaccactatggaatacagtatggaaagtccctaaagaactaaaaatagatctaccatttgatacagcaattctactactgggtatctactcagaggaaaagaagtcatgatatgaacaagacacttgcacacacctgtttatggcaacacattcacaattgaaaaaatatggaaccagcccaaatgcctattaatcaacaagcggtaaagaaaatgtggtatgtatatatcatggaatactactcagtcatataatggaataaaataatggcatttgcagcaacccggatgtagttggagaccattattctaagtgaattaactcaggaatggaaaactaaacatcatatgttctcacttgtaaatgggagctatgctatgaggatgcaaaggcatacgaaagatacaatggaccttggggactc---gggaagggagagggggtaagggataaaagactacacattgggtgcagtgtacactgcttggatgacaagtgcaccaaaatctcagaaatcaccactaaagatcttgttcacataaccagacacaacctgttccccaaaaacctatttgaaataaaaaTAATACttgaaataaacttaaaaaggaacaaatggaagggcattaatgtatggattagaagacttagtattgttgcaatagcagtactccccaaattgatctatagattcaatgcaattcttatgaaagtgtcagctgccttttt-tagaaattggcaaaaagatcttaagattcacgtggatgcaagggatccagaatagctaaaacaatctctaaaaggaaggacaaagttggaggactcccatttccaatttccaaacttcatacaaagtgctcataatcaatatagtatggtacttgcataaggacagacatacaggtcaatggaatgaaattttgaatccagaaatgcatgcttctatttatggtgaattgattttcacaagggtaccaaagaagttcaatgagcaaaaattcatctttaaaaaaagacactgagacaaccggatataatgtacaagaatgaaattgggctcctatctcacactatatatacgcattaa-ttttt-taaaaagagcagagtatgaattatgagagttaaaactataaaactctaagaagtcaacatagtagtaaatctttgtgaccttgaattaggcaatgattttctagttatgaaaccaaaagcaataataaacagataaaattacactttatcaaagtatttttgcatttcaaaggaaaacatgaagaaagtgaaaaaacccacagaatgggagcattatttgcaaattgtatatctgataggagatttgtatccagaatatttaaagaattcttgtaactcaac-acaaaaagacaaataacccaatttaaaaatagacaaagaatttcaatagctatttctgcaatatacaagtggtcaataagcacatgaaaagatacttaacatcattaatcattagggaaatgcaaattaaaacaacaatgagatacaaatttgcacatactaagatggttataatcaaaacgacagacaatgacaagcattagtgaggataattgaaaccttcatacaatgctggtggaaattttaaattattcagccacttttgaaaacaatgtgtcaggtcctt--aaaaaaagttaaacacaaagttaccatttgatcaagcagtttcactccta-agtacataaccaagagcattaaaa-cctatgtctacacaaaatcttgcagagaaatgtcatagcagcattattcataatagaccacaagtggaaacaatccaaatgtccatcaattgatgaatggataaataaaatgtgtcagatccatacaatgaaatattattcagcaatgaaaagaaatgaaatgcaatacatgttata---------acctttaaaacattatgctaagtaaaagaggccagaaacaaaaaggccacatattgtatgaatccttttatatacaaggtagcgtaggtaaatccataaagacaaaaagtcaatcagtggtttccaggtcctaggaggtatgggagaatggagagaattgctaaagggcgggagctttcctttgggatgataaaaatattctTTT-------TAAAAaaatgtatgag----gtacaagttcaattttattatatgcataaattatgttgtggtgaagtcaaggctttcagg-tattcatcacccaaataatgtacattgtatccattaggtaatttctcatcatcaacccttctcttaaccctttcacccttccaaggcaccattgtctatcatcccacactctacgtccatgtgtacacattatttaactc-----------ccacttataagtgagaacattcaatatttgtctttctatatctgacttgtttcacttaaggaaatgacctccagttctacccatgttgctgcaaatgacataatttttttaatggatgaatagtattccattgtgtatatatgccacattttttatccaatcatctgttgat-agacacatatgttgattccatatctttgctattgtgaatagtgccacaataaacatacaagtgtaagtatctttttgatatcattacttattttctcttgagtatacacacagtattgcaactgctgaatccaatggtagctttgtatttagttctttgagaaatcttcatactgttttctatagaagttgaacaaatttatattcccaccaacaacatataagagttcccttatctccacatcatcaccaacatctatta---ttttttgactttttaatagtaaccattctgactagaacaagatgatatcttgttgtagctataattt-gatttct-tgctaattagtgaAgggatgataaaaatattctaaaatgagatactggtgatgcttgaacaaccctgtgaatatacactgcaaaagg i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162189018 4855 - 192294377 ccaAAaaacctgataccatggccc-aagtgaggatttatatcattgtcttcctgcttaaatgttgccttttccaaaaccactcatgttctgccctgcccacatcctgtacagacaaaaatcccatgctcagccaacaaaagaggagaagcaactggacgtcagagactgtggttgcacgtggcagagaagcagcttaacttcaaagagacagcttgatgatgttgcttcagagaggagtctggctagggatggtcagacttcaagggagggtttccttcccactctatccccttttcaactccccatcccactaagagccactttcatcagcaatataatcc---cctgcatttaccatcttcaattcattcatgcaacttcatgtttcctggataccagaaaagagcttagagccacaaatgt-ggtgcaaaaggctgtc-acactgactctccattgagctgttaacactgaagccat-cacagatggcaaaggtaaaagtg-----------------------------------cactgtaaccctcattctggggcttcagggattgtgagcacccttcaagatggtgccatg------------agttttgttcctgctggtgcccaaaagcactcaccctggtttctgcacctactcacctgcatgctccctcttgtgatgggttgagaactgtgggattagtaagtgaggcactcctttcatgaggcctatgaaggggtcagagaaatatcctgcttcaaaattaataactcaacatcttttacggtagctgcaaaaagaaaa------aagaaaaaaaaaaccttaggaatacatctaaccaaggaggtgaaagaccactacaaagaaaactacaaaacatttctgaaagaattcatagatgacacaaacaaatggaaacatatcccatgttcatggatgggtagaatcaatatagtgaaaatgatcatactgtcaaaagcaatctagacattcaatgcaattctcataaaaatgccatcatccgtcttcacacaactagaaaacgcaatccccaaattcac--ggaacccaaaaagagctcacatactcaaagcaagactaaacaaaaagaacaaatctggaggcatcacattacatgacttcaaactatactataatgccatagtcaccaaaacagcaaggtactggtataaaaacaggcacaaagaccaatggaacaggatagagaacacagaaataaagcaaaatacatacagccaaccagtctttgacaaagcaaacaaaaacataaagtggggaaaggacaccctattcaacaaatggtgctgggataattgaaaagccacacatagaaaaatgaaactggattctcatctctcaccttatgcaaaatctactcaagatggatcaaacacttaaatctaagacctaaaaccataacaattctagaagataacatcagaagaacccttctatacattggcataggcaaagacttcctgacttagaacagaaaagcaaatgcaacaaaaacaaagataaatagatggagt----ttaaactaaaaagcttctgcacagcaaaataaataatcatcagaataaacagacaacccacagagtgggaaaaattttttgcaaactatgcatctgacaaagaactaatatccagactctacaaagaactcaaacaaatcagaaagaaaaaaa--aaa---acaatcccatcaaaaagtgggcaatggacataaatagataattctcagtttg-------------ggccatatacaaatggcc-aaaaaaacatat-aaaaatgctcaacatcactaattttcaggaaaatgcaaatcaaaaccacaatgccataccatgccaccttattcctacaagaatggccataattaaaaattcaaaaaataataaatgttggtatagatgtgatgaaaagggaacacttttacactgctattgggaacgtaaactagcacaaccactgtggaatacagtttggaaagtctctaaagaactaaaaatagatctaccatttgatacagcaattctactactgggtatctactcagaggaaaataag---ttatatgaacaagacacttgcacacacctatttatggcagcacattcacaattgcaaaaatatggaaccagcccaaatgcccatcgatcaacaagtggtaaagaaaatgtggtatgtatatatcatggaaaactactcagtcatataaaggaataaaataatggcatttgcaaccacctggatgtagttggtgaccattattctaagtgaattaactgaggaatggaaaaccaaacattgtacgttctcacttgtaagtgggagttaagctatgaggatgcaaagacatacaaatgatacagtagactttggggacttggggggaagggaagggggatgaggaataaaagactacacattgggtgcagtgtacactgctcagataatgagtgcacc-aaatctcagaaatcaccactaaagaacttgttcacgtaaccagacaccacctgtt-cccaaaaacccattagaaataaaaaTAATACttgaaataaactaaaaaggaggtgaatggaagggcattaatgtatggattggaagacttagtattgttgcaatagcaatactccccaaattgatctatagatttgatgcaattttaatgaaagtgtcagctgccttttt-tagaaattcacaaaatgatcttaaaattcacgtggatgcaagggacccagaatagataaaacaacctctaaaaggaaggacaaagttggaggactcccatttccaatttccaaatttaatacaaagtgcccacaatcaatatagcatggtacttgcataaggacagacatacaggccaatggaatgaaattttgaatccaaaaatgcacccttctatttttggtgaattgattttcacaagggtaccaaagaagttcaatgagcaaaaattcatctttaaagaatgacacagagacaactggatataatgcacaagaatgaaattaggcccctatcccacactgtatataagcattaa-tttttaaaaaaagagcagagtactaagtatgagagttaaaactataaaactcttagaagtcaacatagtagtaaatctttgtgaccttgaattaggcaatgattttctagttatgaaaccaaaagcaataataaacagataaaattacacctcatcaaagtatttttgcatttcaaaggaaaacatcaagaaagtgaaaaaacccacataatgggagcattatttgcaaattgtatatctgatgggagatttgtatccagaatgtttaaagaattctcgtaactcaccaacaaaaagacaaataacccaatttaaaaatagacaaagaatttcaatagctatttctgcaatatacaagtggtcaataagcacatgaaaagatacttaacatcattaatcattagggaaatgcaaattaaaacaacaatgagatacaaatttgcacatactaagatggttataatcaaaaggacaggcaatgacaagcattagtgagaataattggaaccttcatacaatgctggtggaaattttaaattatgcagccacttttgaaaacaacgtgtcagctcctttaaaaaaaagttaaacataaagttaccatttgatcaagcaatttcactccta-agtatataaccaagagaattaaaagcatatgtctacacaaaatcttgcagagaaatgtcatagcagcattattcataatagatcacaagtggaaacaatccaaatgtccatcaattgatgaatggataaataaaatgtgtcagatccatacaatgaaatattattcagcaatgaaaagaaatgaaatgtaatacatgttataatgtggatgacctttaaaactttatgctaagtaaaagaggccagaaacaaaaaggccacatattgtatggatccttttatatacgaggtagagtagttaaatctataaagacaaaaagtcagtcagtggttgccaggacttaggaagtatgggagaaaggagagaattgccaaagggcatgagctttcctttgggatgataaaaatactctTTT-------AAAAGaaatgtatgag----gtacaagtgcaattttattacatgcatagattatgttgtagcgaagtcaaggctttcagggtatccatcacccaaataatgtacattgtttccataaggtaatttctcatcattcacccttctttt-accctttcacccttccagggcaccattatctatcatcccacactctacgtccatgtgtacacattatttaactc-----------ccacttataagtgagaacatgcaatatttgtctttctgtatctgacttgtttcacttaaggaaatgacctccagttctatccatgttgctgcaaatgacataa-ttttttaatggatgaatagtattccattgtgtatatgtaccacattttttatccaatcatctgttgataagacacatgggttgattccatatctttgctatcgtgaatagtgccacaataaatatacaagtgtaagtatctttttgatatcatgacttattttcttttgagtatataccaagtagtacaattgctggatccaatggtagctttgtatttagttctctgagaaatctttatactgttttctatagaggttgaactaatttatattcccaccaacaacatataagagttcccttatctccacatcctcagaaacatctatta---tttttttactttttaatagtaaccattctgactagaataagatgatatcttgttgtagctataattt-gatttat-tgctaattagtgaAgggatgataaaaatattctaaaattagatactgatgatgcttacacaaccctgtgaatatacactgcaaaagg i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150873776 4904 - 180432695 CCAAAAAACCTGATACCATGGCCC-AAGTGAGGATTTATATCATTGTTTTCCTGcttaaatgttgccttttccaaaaccactcATGTTCTGCCCTGCCCACATCCTGTACAGACAAAAATCCCATGCTCAGCCAACAAAAGAGGAGAAGCAACTGGACGTCAGAGACTGTGGTTGCATGTGGCAGAGAAGCAGCTTAACTTCAAAGAGACAGCTTGATGATGTTGCTTCAGAGAGGAGTCTGGCTAGGGATGGTCAGACTTCAAGGGAGGGTTTCCTTCCCACTCTATCCCCTTTTCAACTCCCCATCCCACTAAGAgccactttcatcagcaataTAATCC---CCTGCATTTACCATCTTCAATTCATTCATGCAACTTCATGTTTCCTGGATACCAGAAAAGAGCTTAGAGCCACAAATGT-ggtgcaaaaggctgtc-acactgactctCCATTGAGCTGTTAACACTGAAGCCAT-CACAGATGGCAAAGGTAAAAGTAACTGTAACAACAATTACAACTGTAACAACAAAACCCACTGTAACACTCATTCTGGGGCTTCAGGGATTGTGAGCATCCTTCAAGATGGTGCCATG------------AGTTTTGCTCCTGCTGGTGCCCAAAAGCACTCACCCTGGTTTCTGCACCTACTCACCTGCATGCTCCCTCTTGTGATGGGTTGAGAACTGTGGGATTAGTAAGTGAGGCACTCCTTTCATGAGGCCTATGAAGGGGTCAGAGAAATATCCTGCTTCAAAATTAATAACTCAACATCTTTTATGGtagctgcaaaaagaaaa------aag-aaaaaaaaaccttaggaatacatctaaccaaggaggtgaaagaccactacaaagaaaactacaaaacatttctgaaagaattcatagatgacacaaacaaatggaaacatatcccatgttcatggatgggtagaatcaatatagtgaaaatgatcatactgtcaaaagcaatctagacattcaatgcaattctcataAAAATGCCATCATCAGTCTTCACACAACTAGAAAACGCAATCCCCAAATTCacatggaacccaaaaagagctcACATActcaaagcaagactaaacaaaaagaacaaatctggcgGCATCACattacatgacttcaaactatactataatgccatagtcaccaaaacagcaaggtactggtataaaaacaggcacaaagaccaatggaacaggatagagaacacagaaataaagcaaaatacatACAGCCAACCagtctttgacaaagcaaacaaaaacataaagtgaggaaaggacaccctattcaacaaatggtgctgggataattgaaaAGCCAcacatagaaaaatgaaactggattctcatctctcaccttatgcaaaatctattcaagatggatcaaacacttaaatctaagacctaaaaccataacgattctagaagataacatcggaAGAACCCTTCTATACattggcataggcaaagacttcctgacttagaacagaaaagcaaacgcaacaaaaacaaagataaatagatggagt----ttaaactaaaaagcttctgcacagcaaaataaataatcatcagagtaaacagacaacccacagagtgggaaaaattttttgcaaactatgcatctgacaaagaactaatatccagactctacaaagaactcaaacaaatcagaaagaaaaaaa--aaa-----aatcccatcaaaaagtggacaatgGACATAAATAGATAATTCTCAGTTTGGGTCATATACAATGGccatatacaaatggcc-aaaaaaaaatat-aaaaatgctcaacatcactaattttcaggaaaatgcaaatcaaaaccacaatgccatACCATGCCACCTTAttcctacaagaatggccataattaaaaattcaaaaaataataaatgttggtatagatgtgatgaaaagggaacacttttacactgctatTGGGAACGTAAACTAGCACAACCACTGTGGAATACAGTATGGAAAGTCtctaaagaactaaaaatagatctaccatttgatacagcaattctactactgggtatctactcagaggaaaataagttattatatgaacaagacacttgcacacacctATTTATGGCAGcacattcacaattgcaaaaatatggaaccagcccaaatgcccatcgatcaACAAGtggcaaagaaaatgtggtatatatatatcatggaaaACTACTCAGTcatacaaaggaataaaataatggcatttgcaaccACCTGGATGTAGTTGgtgaccattattctaagtgaattaactgaggaatggaaaaccaaacattgtatgttctcacttgtaagtgggagttaagctatgaggatgcaaagacatacaaatgatacagtagactttggggacttggggggaaggaaagggggatgaggaataaaagactacacattgggtgcagtgtacactgctcagatAATGAGTGcacc-aaatctcagaaatcaccactaaagaacttgttCACGTAACCAGacaccacctgtt-cccaaaaacccattagaaataaaaataatacttgaaataaactaaaaaagaagTGAATGGAAGGGCATTAAtgtatggattggaagacttagtATTGTTGCAATagcaatactccccaaattgatctatagatctGATGCAATTTTAATGAAAGTGTCAGCTGCCTTTTT-TAGAAATTCACAAAATGATCTTAAAATTCACGTGGAcgcaagggacccagaatagctaaaacaatctcTAAAAGGAaggacaaagttggaggactcccATTTTCAATTTCCAAATTTAATACAAAGTGCCTGCAATCAATATAGCATGGTACTTgcataaggacagacatacaGGCCAATGGAATGAAATTTTGAATCCAAAAATGCACCCTTCTATTTTTGGTGAATTGATTTTCACAAGGGTACCAAAGAAGTTCAATGAGCAAAAATTCATCTTTAAAGAATGACACAGAGACAACTGGATGTAATGCACAAGAATGAAATTAGGCCCCTATCCCACACTGTATAtaagcattaa-ttttt-aaaaaagagcagaGTATTAAGTGTgagagttaaaactataaaactcttagaagtcAACATAGtagtaaatctttgtgaccttgaattAGGCAATGATTTTCTAGTTATGAAACCAAAAGCaataataaacagataaaattacACCTCATCAAAGTATTTTTGCATTTCAAAGGAAaacatcaagaaagtgaaaaaacccACATAATGGGAGCATTATTTGCAAATTGTATATCTGATGGGAGATCTGTatccagaatatttaaagaattctcgtaactcaacaacaaaaagacaaataacccaatttaaaaatagacaaagaatttCAATAGCTATTTCTGCAATATACAagtggtcaataagcacatgaaaagatacttaacatcattaatcattagggaaatgcaaattaaaacaacaatgagatacaaATTTGCACATACTAAGATGGTTATAATCAAAAGGACAGGCAATGACAAGCATTAGTGAGGATAATTGGAACCTTCATACAATGCTGgtggaaattttaaattatgcagCCACTTTTGAAAACAATGTGtcagctcctttaaaaaaaagttaaacacaaagTTACCATTTGATCaagcaatttcactccta-agtATATAACCAAGAGAATTAAAggcatatgtctacacaaaatcTTGCAGAGAAAtgtcatagcagcattattcataatagatcacaagtggaaacaatccaaatgtctatcaattgatgaatggataaataaaatgtgtcagatccatacaatgaaatattattcagcaatgaaaagaaatgaaatgtaataCATGTTATAATGTGGATGACCTTTAAAActttatgctaagtaaaagaggCCAGAAACAAAAAGGCCACATGTTGTATGGATCCTTTTATATACAAGGTAGAGTAGTTAAATCTATAAAGACAAAAAGTCagtcagtggttgccaggactTAGGAAgtgtgggagaaaggagagaattgCTAAAGGGCATGAGCTTTCCTTTGGGATGataaaaatactctttt-------aaaagaaatgtatgag----gtacaagtgcaattttatTACATGCATAGATTATGTTGTAGCGAAGTCAAGGCTTTcagggtatccatcacccaaataacatACATTGTTTCCATAAGGTAATTTCTCATCATTCACCCTTCTTTT-ACCCTTTCACCCTTCCAGGGCACCATTATCTATCATCCCACACTCTacgtccatgtgtacacattatttaactt-----------ccacttataagtgagaacatgcaatatttgtctttctgtatctgacttgtttcacttaaggaaatgacctccagttctatccatgttgctgcaaatgacataattttttttatggatgaatagtattccattgtgtatatgtaccacattttttatccaatcatctgttgat-agacacatgggttgattccatatctttgctatcgtgaatagtgccacaataaatatacaactgtaagtatctttttgatatcatgacttattttcttttgagtatataccaagTAGTACAATTGCTGGATCCAATGGTAGCTTTGTAtttagttctctgagaaatctttatactgttttctatagaggttgaactaatttatattcccaccaacaacatATAAGAGTTCCCTTATCTCCACATCCTCagaaacatctatta---tttttttactttttaatagtaacCATTCTGACTAGAATAAGATGATATCTTGTTGTAGCTATAATTT-GATTTAT-TGCTAATTAGTGAagggatgataaaaatattctaaaattagatactGATGATGCTTGCACAACCCTGTGAATATATACTgcaaaagg i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14974493 4875 - 90373283 ccaAAaaccctgataccatggccc-aagtgaggatttatatcattgttttcctgcttaaatgttgccttttccaaaactactcatgttctgccctgcccgcatcctgtacagacaaaaatcccatgctcagccaacaaaagaggagaagcaactggacgtcagagactgtggttgcatgtggcagagaagcagcttaacttcaaagagacagcttgatgatgttgcttcagagaggagtctggctagggatggtcagacttcaagggagggtttccttcccactctatccccttttcaactccccatcccactaagagccactttcatcagcaatataatcc---cctgcatttaccatcttcaattcattcatgcaacttcatgtttcctggataccagaaaagagcttagagccacaaatgt-ggtgcaaaaggctgtc-acactgactctccattgagctgttaacactgaagccat-cacagatggcaaaggtaaaagtg-----------------------------------cactgtaacactcattctggggcttcagggattgtgagcacccttcaagatggtgccatg------------agttttgttcctgctggtgcccaaaagcactcaccctggtttctgcacctactcacctgcatgctccctcttgtgatgggttgagaactgtgggaatagtaagtgaggcactcctttcatgaggcctatgaaggggtcagagaaatatcctgcttcaaaattaataactcaacatcttttacggtagctgcaaaaagaaaa------aagaaaaaaaaaaccttaggaatacatctaaccaaggaggtgaaagaccactacaaagaaaactacaaaacatttctgaaagaattcatagatgacacaaacaaatggaaacatatcccatcttcatggatgggtagaatcaatatagtgaaaatgatcatactgtcaaaagcaatctagacattcaatgcaattctcataaaaatgccatcatcagtcttcacacaactagaaaatacaatcccaaaattcacatggaacccaaaaagagctcacatactcaaagcaagactaaacaaaaagaacaaatctggaggcatcacattacatgacttcaaactatactataatgccatagtcaccaaaacagcaaggtactggtataaaaacaggcacaaagaccaatggaacaggatagagaacacagaaataaagcaaaatacatacagccaaccagtctttgacaaagcaaacaaaaacataaagtgaggaaaggacaccctattcaacaaatggtgctgggataattgacaagccacacatagaaaaatgaaactggattctcatctctcaccttatgcaaaatctactcaagatggatcaaacacttaaatctaagacctaaaaccataacgattctagaagataacatcggaagaacccttctatacattggcataggcaaagacttcctgacttagaacagaaaagcaaatgcaacgaaaacaaagataaatggatggagt----ttaaactaaaaagcttctgcacagcaaaataaataatcatcagagtaaacagacaacccacagagtgggaaaaattttttgcaaactatgcatctgacaaagaactaatatccagactctacaaagaactcaaacaaatcagaaagaaaaaaa--aaaaaaacaatcccatcaaaaagtgggcaatggacataaatagataattctcagtttgggccatatacaatggccatatacaaatggtcaaaaaaaacatat-aaaaatgctcaacatcactaattttcaggaaaatgcaaatcaaaaccacaatgccataccatgccaccttattcctacaagaatggccataattaaaaattcaaaaaataataaatgttggtatagatgtgatgaaaagggaacacttttacactgctattgggaacgtaaactagcacaaccactgtggaatacagtatggaaagtctctgaagaactaaaaatagatctaccattcgatacagcaattctactactgggtatctactcagaggaaaataagttattatatgaacaagacacttgcacacacctatttatggcagcacattcacaattgcaaaaatatggaaccagcccaaatgcccatcgatcaacaagtggtaaagaaaatgtggtatgtatatatcatggaaaagtactcagtcatataaaggaataaaataatggcatttgcagccacctggatgtagttggtgaccattattctaagtgaattaactgaggaatggaaaaccaaacattgtatgttctcacttgtaagtgggagttaagctatgaggatgcaaagacatacaaatgatacagtagactttggggacttggggggaagggaaggaggatgaggaataaaagactacacattgggtgcagtgtacactgctcagataatgagtgcacc-aaatctcagaaatcaccactaaagaacttgttcatgtaaccaggcaccacctgtt-cccaaaaacccattagaaataaaaaTAATACttgaaataaactaaaaaagaagtgaatagaagggcattaatgtatggattggaagacttagtattgttgcaataccaatactccccaaattgatctatagatttgatgcaattttaatgaaagtgtcagctgccttttt-tagaaattcacaaaatgatcttaaaattcacgtggatgcaagggacccagaatagctaaaacaatctctaaaaggaaggacaaagttggaggactcccatttccaatttccaaatttaatacaaagtgcccacaatcaatatagcatggtacttgcataaggacagacatacaggccaacagaatgaaattttgaatccaaaaatgcacccttctatttatggtgaattgattttcacaagggtaccaaagaagttcaatgagcaaaaattcatctttaaagaatgacacagagacaactggatataatgcacaagaatgaaattaggcccctatcccacactgtatataagcattaa-ttttt-aaaaaagagcagagtattaagtatgagagttaaaactataaaactcttagaagtcaacatagtagtaaatctttgtgaccttgaattaggcaatgattttctagttatgaaaccaaaagcaataataaacagataaaattacacctcatcaaagtatttttgcatttcaaaggaaaacatcaagaaagtgaaaaaacccacagaatgggagcattatttgcaaattgtatatctgatgggagatttgtatccagaatatttaaagaattctcataactcaacaacaaaaagacaaataacccaatttaaaaatagataaagaatttcaatagctatttctgcaatatacaagtggtcaataagcacatgaaaagatacttaacaccattaatcattagggaaatgcaaattaaaacaacaatgagatacaaatttgcacatactaagatggttataatcaaaaggacagacaatgacaagcattagtgaggataattggaaccttcatacaatgctggtggaaattttaaattatgcagccacttttgaaaacaatgtgtcagctccttttaaaaaaagttaaacacaaagttaccatttgatcaagcaatttcactccta-agtatataaccaagagaattaaaagcatatgtctacacaaaatcttgcagagaaatgtcatagcagcattattcataatagaccacaagtggaaacaatccaaatgtccatcaattgatgaatggataaataaaatgtgtcagatccatacaatgaaatattattcagcaatgaaaagaaatgaaatgtaatacatgttacaatgtggatgacctttaaaactttatgctaagtaaaagagaccagaaacaaaaaggccatatattgtatgaatccttttatatacaaggtagagtagttacatccataaagacaaaaagtcagtcagtggttgccaggacctaggaggtatgggagaaagaagagaattgctaaaaggcatgaactttcctttgggatgatgaaaatactctttt-------aaaagaaatgtatgag----gtacaagtgcaattttattacatgcatagattatcttgtagcaaagtcaaggctttcagggtatccatcacccaaataatgtacattgtatccataaggtaatttctcatcatccacccttctttt-accctttcacccttccaaggcaccattgtctatcatcccacactctacgtccatgtgtacacattatttaactc-----------ccacttataagtgagaacatgcaatatttgtctttctctatctgacttgtttcacttaaggaaatgacctccagttctatccatgttgctgcaaatgacataa-ttttttaatggatgaatagtattccattgtgtatatgtaccacattttttatccaatcatctgttgat-agacacatgggttgattccatatctttgctattgtgaatagtgccacaataaatatccaagtgtaagtatctttttgatatcatgacttattttcttttgagtatataccaagtagtataattgctggatccaatggtatctttgtatttagttctctgagaaatcttcatactattttctatagaggttgaactaatttatattcccaccaacaacatgtaagagttcccttatctccacatcctcaccaacatctatta---tttttttactttttaatagtaaccattctgactagaataagatggtatcttgttgtagctataattt-gatttat-tgctaattagcaaagggatgataaaaatattctaaaattagatactgatgatgcttgcacaaccctgtgaatatacactgcaaaagg i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21902608 4807 + 50472720 ccaaaatgcctgataccatggcccaaagtgagaacttacatcattgatttcccgcttgaatgttgccttttccaaaactactcaagtccttccccagccccatcctgtacagataaaaatcccatgctcagccaacaaaa---gagaagcagctgttcctcagagactatggttgcatgtcaaagaggaacagcttaacttcaaaaagacaac-tgatggtgtagcttcagagaagaatccggccagagatggccagacttggagggaggattgccttcccaccctgtccccttttcaactccccatcccactaacagccaatttcatatgcaataacacccccgcctgcatttatcatcttcaattcattcatgcaacctcatgtttcctggatgccagacaagagctcggagccacaaatgtgggtgtaaaaggctgtcaacactgaccttctattgagctgttaacacttaaaccgt-cacagatggcaagggtgaaagtg-----------------------------------cactgtaacactcattctggggtgtcaggggttgtgagcaccccctgagatgctgccatgaggcctgcacaaagttttgctcctgccattacccaaaagcactcgccctggcttctgcacccagctacctgcatgcttcctcttgtaaggggttgagaaccatgggatgaataagtgaggcactcctgtcatgaggctcatgaaggggtcagagaaatatcctgcttcaaaattaataactcaac-------acagtagctgcaaaaaaaaaa----------------------taggaatacatgtaacaaagaaggtgaaag--tgctacaaggaaaactataaaatactactgaaaaaattcatagatgacacaaacaaatggaaatacacccaatgctcatggatgggtagaatcaacattgtgaaaatgcaagtactgtcaaaagcaatctagaaattcaatataattctagtaatagtatcatcattattcttcacagaactagaaaaagcaatcctaaaatttacatggaattaaaaaagagctcaaataccaaaagcaagactaaacaaaaggaacaaatctggaggcgtcacattacataaatttaaactatactataatgccatagccaccaaaacagcaaggtactggtgtaaaaataggcacatagactgatggaacagaatagagaacccagaaataaagccaaacacatacagccaaccaatccttgacaatgcaaacaaaaacataaagtggagaaaggatatcttagtcaacaaatggtgctggaataattggcaagccacatgtaaaaaaatgaaactggactctcatctctcaccttacgcaaaatcaactcaagacagatcaagcattttaatttgagacctaaaaccatgaagattctagaagataacatcagaagaacccttctagactttggcttaggcaaagacttcataccttagaacacaaaaggaaatgcaacaaaaacaaagataaatggatggagcttaattaaactaaaaaacttctgcacagcaaaagaaataatcagcagggtaaacagacaagccacaaagtgggaaaaaatatttgcaaactatgcatctgacaaagaactagtatccagaatctacagaaaactca----aatcatcaagaaaaaaa--taa-----aatctcatcaaaaagtgggcaatggacatgaatagacaattctcaa------------aatatgtatatatacaaatggca-aaaaaaatattttaaaaatgctcaacatcactaattatcaggaaaacacaaatcaaaaccacaatgccatatcatgccaccttactcctgcaagaatggccataattaaaaattcaaaaaataataaattttggtgtcaatacggtaaaaagaaaacacttttacactgctgttgggaatgtaaactagcacaaccactatggaatactgtatggagacttcctaaaaatctaaaaatagatctaccatttggtacagcaattttactactggttgtctactcagaagaaaagaagtcattatatggacaagacacttgcacacacctgtttgtggcagtatattcccaactgcaaaaatatggaaccagctcaaaagaccattgatcaacaaattgtaaagaaaatgtggtatgtatatatcatggaatactactcattcataaaaagtaataaaataatggcatttccagcaacct-gatgtagttggagacttttattctaagtgaactaacacaggaatggaaaaccaaatatcatatgttctcacttgtaagtgggagttaaactaggaggatgcaaaggcatacaaatgatacaatggatgttggggactcaaggggaaggtaggg-----gaggaatgaaagactatacattggatacagtgtacactactcagatgattggtgcaccaaaatctcagaaatcaccactaaagaacttgttcatgcaaccagacaccacctgttccccaaaaacctatt-gaaataaaaaTAatcattgaaataaactaaaaaagaaataaatggaagggcattaatgtatggattggaagacttaatattgttacaatagcaatactccccaaattgatctacagatttgatgcaattcctatgaaagggtcagctgcttttttctagaaattggcaaaatactcttaaaattcacatggatgcaagggatccaaagtagctaaaacaatctctaaaa-gaaggacaaaattgtaggattcccatttccaatttccaaatttaatacaaagttcccataatcaatacagtatggcacttccataagaacagacatataggtcaatgaaatggaattttgaatcaaaaaatgcacccttccacttatggtgaattgattttcacaagggtaccaaagaagttcagtaagcaaaaatgcatctttaaaaaatgacactgagacaactggacataatgcacaagaatgtaactgggtacctatctcacactatatataagcattcatttttt-aaaaaggaacagagtattaaatatgagagttaaaactttaaaactcttttaagttaacatagtagtaaatctttgtggccttgaattaggcaatg------tagttatgaaaccaaaagcaataaaaaatagataaaattatacttcatcagagtatttttgcatttcaaaggacaacatcaagaaagtgaaaacacccacagaatgggagcattatttgcaaattgtatatctgataggggattcatatccagaatctttaaagaattcttgtaattcaataacaaaaagacaaataatccaatttaaaaatagacaaagaatttcaatagccatttctgcaatatacaagtagtcaataagcacatgaaaagatacttatcatcattaatcattagggaaatgcaaattaaaac------gagatacaaatttgcacatactatgatggctataatcaagaggacagacaatgacaagcattagtgaggataattggaacctttgtacaatgccagtggaaattttaaatcatgcagccacttttgaaagcaatgtgtcaggtcctt--aaaaaaagttaaatacaaagttatcatttgatcaagcaatttcactccta-agtatataaccaagagaattaaaagcatatgtccacacaaaatcttgcagagaaatgtcacagcagcattattcataatagaccacaaatggaaacaatccagttgtccatcaactgatgaatggataaataaaatgtgtcacatccatacaatgaaatattattcagcaatgaaaagaaacaaaatgtaatacatgttttg-------------------ctttatgctaagcaaaagaggtcagaaacaaaaaggccacatattgtgtgaatccctttatatacaatgtagagtaggtaaatccataaagatagaaagtcaatcagtggttgccaggacctgagaggtatgggagaatggagagaattgctaaagagcatgagctttccattggaatgataaaaatgttctTTTTTAAAAAAAAATAAatgtatgagatacatacaaatccaattttattacatgcatagattatgttgtagtgaagtcatggctttcagggtatccatcaccccaaaagcct----------------ttaatttctcatcatccacccctttcgt-accctttcacccttccaaggcataattgtctatcatcccatgctctgtgtccatgtgtacacattatttaactg-----------ccacttataagtaagaacatgcaatatttctctttctacatctgacttgtttcacttaaggaaacgacctccagttctatccatattgctgtaaaagatgc---ttttttaatgaatgaatagtatttcattatgtatatataccacatttttaatacaatcatctgttgat-agacacatgggttgattccatatctttgctattgtgaatagtgccacaataaacatacaagtacaagtatctttttgatatcatgacttattttcttctgagtgtttacccagtagtgtaatttttggatcctatggtagttttgtatttagttctttgagaaatcttcatactgttttctatagaggttgaactaattaatattcccaccaacagcatataagagttctcttatctccacatcctcaccaatatctattgttttttttttactttttaatagtaaccattctgactagaataagatggtatcttattgtggctataatttggatttctctgcttattagtgaAAgaatgat-aaaatattccaaaattagatactgatgatgcttgcacaatcctgtgaatatacactgaaaaaga i calJac3.chr21 I 10705 C 0 e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e rheMac3.chr3 168514602 16250 - 198365852 I a score=108604.000000 s hg38.chr21_KI270874v1_alt 43778 42 + 166743 gtgaattttatgtgtgaattatatctcaataaaATATAAAAC s panTro4.chr21 3656639 42 + 32799110 gtgaattttatgtgtgaattatatctcaataaaatataaaac i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16906677 42 + 48394510 gtgaattttatgtgtgaattatatctcaataaaATATAAAAC i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4416477 40 + 32716333 gtgaattt--tgtgtgaattatatctcaataaaATATAAAAC i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162193873 41 - 192294377 gtgaattttatgtgtgaattatatctcaataaCATATAAAA- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150878680 41 - 180432695 gtgaattttatgtgtgaattatatctcaataaaatataaaa- i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14979368 41 - 90373283 gtgaattttatgtgtgaattatatctcaataaaATATAAAA- i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21907415 42 + 50472720 gtgaattttatgcgtgaagtatatctcaataaaATAGaaaat i calJac3.chr21 C 0 C 0 s canFam3.chr31 13793896 39 + 39895921 GTGGATTTTACATGTGAATTATATCTCAACAAAATATTA--- i canFam3.chr31 I 5522 C 0 e mm10.chr16 78093388 3140 + 98207768 I e rheMac3.chr3 168514602 16250 - 198365852 I a score=208901.000000 s hg38.chr21_KI270874v1_alt 43820 75 + 166743 AATATTTTAA----TTAATAAATAAAATACATCTGTTTACCCCCC--CCCAAAAA---AAA----ACCCAGA-TCAATGGCTAGAAGGC s panTro4.chr21 3656681 76 + 32799110 aatattttaa----ttaataaataaaataCATCTGTTTACCCCCC--CCAAAAAA---AAA---TACCCAGA-TCAATGGCTAGAAGGC i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16906719 79 + 48394510 AGtattttaa----ttaataaataaaatatatCTGTTTACCCTCC--CCCAAAAA---AAAAAATACCCAGA-TCAATGTCTAGAAGGC i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4416517 77 + 32716333 AATATTTTAA----TTAATAAATAAAATACATCTGTTTACCACCC--CCCCAAAA---AAA--TTACCCAGA-TCAATGGCTAGAAGGC i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168530852 78 - 198365852 aatattttaa----ttaataaataaaataCATCTGTTTACCACCCCTCCCCCAAA---AAA---TACCCAGA-TCAATGGCTAGAAGGC i rheMac3.chr3 I 16250 C 0 s macFas5.chr3 162193914 76 - 192294377 --TATTTTAA----TTAATAAATAAAATACATCTGTTTACCACCCCTCCCCCCAA---AAA---TACCCAGA-TCAATGGCTAGAAGGC i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150878721 76 - 180432695 --tattttaa----ttaataaataaaatacatctgtttaccacccctcccccaaa---aaa---TACCCAGA-TCAATGGCTAGAAGGC i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14979409 76 - 90373283 --TATTTTAA----TTAATAAATAAAATACATCTGTTTACCACCCCTCCCCCAAA---AAT---TACCCAGA-TCATTAGCTAGAAGGC i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21907457 75 + 50472720 aatattttaa----ttaataaatGAAATACCTCTGTATACC------CCCAAAGAAGCAAA---TACCCAGA-TCAATGGCTAGAAGGC i calJac3.chr21 C 0 C 0 s canFam3.chr31 13793935 75 + 39895921 --TGTTTTAAGTTTTTAATAAATAAAAGACAGCTAGATTTC------CAAAAAAT---AAA---TGCCCAAAGTCATCAGTTAAAAGGC i canFam3.chr31 C 0 C 0 e mm10.chr16 78093388 3140 + 98207768 I a score=422064.000000 s hg38.chr21_KI270874v1_alt 43895 116 + 166743 AAAGAAGCTAGAAAATACACTATTCCTATTCTA-----AAG-----CTGATAATCA-TTTTACCATGTTGTAGATATCTCTAAGTAAGAAGTTGACA--AAGATCAACAAAAAGATGTGTTCCATTCCA s panTro4.chr21 3656757 116 + 32799110 AAAGAAGCTAGAAAATACGCTATTCCTATTCTA-----AAG-----CTGATAATCA-TTTTACCATGTTGTAGATATCTCTAAGTAAGAAGTTGACA--AAGATCAACAAAAAGATGTGTTCCATTCCA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16906798 116 + 48394510 AAAGAAGCTAGAAAATACACTATTCCTATTCTA-----AGG-----CTGATAATCA-TTTTACCATGTTGTAGATATCTCTAAATAAGAAGTTGACA--ATGATCAACAAAAAGATGTGTTTCATTCCA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4416594 117 + 32716333 AAAGAAGCTAAAAAATACACTATTCCTATTCTA-----AGG-----CTGATAATTATTTTTACCATGTTGTAGATATCTCTAAGTAAGAAGTTGACA--AAGATCAACAAAAAGATGTGTTCCATTCCA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168530930 116 - 198365852 AAAGAAGCTAGAAAATACACTATTCCTATTCTA-----AGA-----CTGATAATCA-TTTTACCATGTTGTAGATATCTCTAAGTAAGAAGTTAAAA--AAGATCAACAAAAATATGTGTTCCATTCCA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162193990 116 - 192294377 AAAGAAGCTAGAAAATACACTATTCCTATTCTA-----AGA-----CTGATATTCA-TTTTACCATGTTGTAGATATCTCTAAGTAAGAAGTTGAAA--AAGATCAACAAAAATATGTGTTCCATTCCA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150878797 116 - 180432695 AAAGAAGCTAGAAAATATACTATTCCTATTCTA-----AGA-----CTGATAATCA-TTTTACCATGTTGTAGATATCTCTAAGTAAGAAGttgaaa--aagatcaacaaaaagaTGTGTTCCATTCCA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14979485 116 - 90373283 AAAGAAGCTAGAAAATACACTATTCCTATTCTA-----AGG-----CTGATAATCA-TTGTACCATGTTGTAGATATCTCTAAGTAAGAAGTTGAAA--AAGATCAACAAAAAGATGTGCTCCATTCCA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21907532 115 + 50472720 AAGGGAGCTAGAAAATATACGATTCCTATTCTA-----AGG-----CTGATAATCA-TTTTACCATGTTGTAGATATCTCTAAGTAAGAAGTTGAAA--AA-ATCAACAAAAAGATATATTCCATTCCA i calJac3.chr21 C 0 C 0 s mm10.chr16 78096528 113 + 98207768 aaaGAAACTAG-AAATGCACTTTCCATGGCACAACTACAGC-----TTAACAACTA-TTTTACTATGTTCTAGCTATTTTCAAGT-ATATGTTG-----GAGAGCAACAATAAGATGTA---CATTCTA i mm10.chr16 I 3140 I 555 s canFam3.chr31 13794010 123 + 39895921 AAAGCATCTGAGAAATACAATATTTTTATTCTA-----AGCCCACTCTAATAATCA-CTTTACTATGCTGTAGCCATCTCCAAATAGTAAATTGGGGATAAAATCACTAATAAGATGTACTCCATCCCT i canFam3.chr31 C 0 C 0 a score=285658.000000 s hg38.chr21_KI270874v1_alt 44011 90 + 166743 AAAATTTCTCGATTCTATGATTCAGCGCAGAAAGATTGTGCAAGTTTATACTTTAGTAATACAGAACAAAGTGAGTACTGGtgatagcag s panTro4.chr21 3656873 90 + 32799110 AAAATTTCTCGATTCTATGATTCAGCGCAGAAAGATTGTGCAAGTTTATACTTCAGTAATACAGAACAAAGTGGGTACTGGtgatagcag i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16906914 90 + 48394510 GAAATTTCTCGATTCTATGATTTAGCGCAGAAAGATTGTGCAAGTTTATACTTTAGTAATACAGAATAAAGtgggtactggtgatagtgg i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4416711 90 + 32716333 AAAATTTCTCGATTCTATAAATTAGTGCAGAAAAATTGTTCAAGTTCATACTTTAGTAACACAGAACAAAGTGGGTACTGGtgatagcgg i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168531046 89 - 198365852 AAAAGTTCTCGATTCTATAATTTAGTGCAGAAAGATTGTGCAAGTTTATACTTTAGTAATAT-GAACAAAGTTGGTACTGGtgatagagg i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162194106 89 - 192294377 AAAAGTTCTCGATTCTATAATTTAGTGCAGAAAGATTGTGCAAGTTTATACTTTAGTAATAT-GAACAAAGTTGGTACTGGtgatagagg i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150878913 89 - 180432695 AAAAGTTCTCGATTCTATAATTTAGTGCAGAAAGATTGTGCAAGTTTATACTTTAGTAATAT-GAATAAAGTTGGTACTggtgatagagg i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14979601 89 - 90373283 AAAAGTTCTCGATTCTATAATTTAGTGCAGAAAGATTGTGCAAGTTTATACTTTAGTAAGAT-GAACAAAGTGGGTACTGGtgatagagg i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21907647 90 + 50472720 AACATTCCTCAATTCTATGATTTAGTGCAGAAAGACTGTGCAGGTTTATACCTTAGTAATACAGAACAAAGTTGGTACTTGAgatagcag i calJac3.chr21 C 0 C 0 s canFam3.chr31 13794133 90 + 39895921 AAAATTCCTCAGGTCTATGGTTTAGTGCAGAGAGGCTGTATAGGTTTATACCCTACTAATTCAGAACAAATTGGGTACTAGAAAGAACAG i canFam3.chr31 C 0 C 0 e mm10.chr16 78096641 555 + 98207768 I a score=1870837.000000 s hg38.chr21_KI270874v1_alt 44101 641 + 166743 cagaaggcagacacatttctaggcagacaggggtgagtccccagtaaaactagaccttcaaaccaagcacagcttaaagcctgaaaactgagttaccagcgtccacaaccagagtgagaacttcctcag----tgccttttagccaatttaatggtgctttgtccaggcccacttatggaccaatcagcacacactcccccattctgatcccataaaaaccctggactcagccacatattggg---actacatgctttcaggtaggggctacccacttcaggtcccctcttgtgtcaagagctgttctgttgt-ctcttctctgccttgcttattctccagttgtccatgtaacctcattcttcttggacatgggacaagaacccagtacccaccaaatggcaggtgcaaaaaatgctgtaaca-ctgtagccctccaaccctctgctggcaccaggctgttgcttcatgtaacaggaagcagtggcaatggggccaggccagccaagaagctatgagctggaatgtgggcagcaggactgaacaagctgtaaaacaaatgagctgaaacttgctgccctc----------ccacccccattcactgtgctgcaggcagtggaaagaagagagagatgtatcactccttgagggctcaga s panTro4.chr21 3656963 642 + 32799110 cagaaggcagacacatttctaggcagacaggggtgagtccccagtaaaactagaccttcaaaccaagcacagcttaaagcctgaaaactgagttaccagcgtccacaaccagagtgagaacttcctcag----tgccttttagccaatttaatggtgctttgtccaggcccacttatggaccaatcagcacacactcccccattctgatcccataaaaaccctggactcagccacatattggg---actacatgctttcaggtaggggctacccacttcaggtcccctcttgtgtcaagagctgttctgttgttctcttctctgccttgcttattctccagttgtccatgtaacctcattcttcttggacatgggacaagaacccagtacccaccaaatggcaggtgcaaaaaatgctgtaaca-ctgtagccctccaaccctccgctggcaccaggctgttgctccatgtaacaggaagcagtggcaatggggccaggccaaccaagaagctatgagctggaatgtgggcagcaggactgaacaagctgtaaaacaaatgagctgaaacttgctgccctc----------ccaccccctttcactgtgctgcaggcagtggaaagaagagagagatgtatcactccttgagggttcaga i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16907004 642 + 48394510 cagaaggcagacacatttctaggcagacaggggtgagtccccagtaaaactagaccttcaaaccaagcacagcttaaagcctgaaaactgagctcccagagtccacaaccagagtgagaacttcctccg----tgccttttagccaatttaatggtgctttgtccaggcccacttatggaccaatcagcacacactcccccattctgatcccataaaaaccctggactcagccacatattggg---actacatgctttcaggtagcagctacccacttcaggtcccctctcgtgtcaagagctgttctgttgttctcttctctgccttgcttattctccagttggccatgtgacctcattcttcttggacatgggacaagaacccagtacccaccaaatggcaggtgcaaaaaatgctgtaaca-ctgcagccctcccatcctccgctggcaccaggcagttgctccatgtaacaggaagcagtggcagtggggccaggccagccaagaaactatgagctggagtgtgggcagcaggactgaacaagttgtaaaacaaatgagttgaaacttgctgccctc----------ccacccccattcactgcgctgcaggcagtggaaagaagagagagatgtatcactccttgagggctcaga i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4416801 640 + 32716333 aagaaggcagacacatttctaggcagat--gggtgagtccccagtaaaactggaccttcaaaccaagcacagcttaaagcctgaaaattgggctgccagagtccacaaccagagtgagaacttcctcag----tgccttttagccaatttaatggtgctttgtccaggcccacttatggaccaatgagcacatacttccccgttctgatcccataaaaatcctggactcagccacatattggg---actacatgctttcaggtaggggctaccaacttcaggtcccctctcatgtcaagagctgttctgttgttctcttgtctgccttgcttattctccagttgtccatgtaacctcattcttcttggacacgggacaagaacccagtactcgccaaatggtgggtgcaaaaaatgctgtaaca-ctgtagccctcccacactctgctggcaccaggcagttgctccatgtaacaggaagcagtggcagtggggccaggccagccaagaagctatgagacggactgtgggcagcaggactgaacaagctgtgaaacaaatgagctgaaacttgctgccctc----------ccacccccattcactgtactgcaggcagtggaaagaagagagagatgtatcactccttgagggctcaga i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168531135 644 - 198365852 caggaggcagacacatttctaggcagataggggtgggtccccagtaaaactgaaccttcaaaccaagcacaggttaaagcctgaaaacggagctggcagaatccacaaccagagtgagaacttcctcag----tgccttttagcgaatttaatggtgctttgtctaggcccacttatggaccaatcagcacacactctcccattctgatcccatataaaccctggactcagccacatattgggactactacatgctttcaggtagacgctaaccacttcaggtcccctctcgtgtcaagagctgttctgttgttctcttctctgccttgcttattctctagttgtccatgtaacctcattcttcttggacatgggacaagaacccagtacctgccaaatggcaggtacaaaaaatgctgtaaca-ctgtaaccctcccaccctccgctggtgccaggcagctgctccacataacagaaagcagtagcagtggggccaggtcagcccagaagctacgagctggagtg-gagcagcaggactgaacaagctgtaaaacaaatgagctgaaacttgctgccctc----------ccacccccattcactgtgccacaggcagtggacaggagacagagacgtaacactccttgagggctcaga i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162194195 644 - 192294377 caggaggcagacacatttctaggcagataggggtgggtccccagtaaaactgaaccttcaaaccaagcacaggttaaagcctgaaaacggagctggcagaatccacaaccagagtgagaacttcctcag----tgccttttagcgaatttaatggtgctttgtctaggcccacttatggaccaatcagcacacactctcccattctgatcccatataaaccctggactcagccacatattgggactactacatgctttcaggtagacgctaactacttcaggtcccctctcatgtcaagagctgttctgttgttctcttctctgccttgcttattctctagttgtccatgtaacctcattcttcttggacatgggacaagaacccagtacctgccaaatggcaggtacaaaaaatgctgtaaca-ctgtaaccctcccaccctccgctggtgccaggcagctgctccacataacagaaagcagtagcagtggggccaggtcagcccagaagctacgagctggagtg-gagcagcaggactgaacaagctgtaaaacaaatgagctgaaacttgctgccctc----------ccacccccattcactgtgccacaggcagtggacaggagacagagacgtaacactccttgagggctcaga i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150879002 640 - 180432695 caggaggcagacacaTTTCTAGGCAGATAGGGGTGGGTCCCCAGTAAAACTGAACCTTCAAACCAAGCACAGGTTAAAGCCTGAAAATGGAGCTGCCAGAATCCAcaaccagagtgagaacttcctcAG----TGCCTTTTAGCGAATTTAATGGTGCTTTGTCCAGGCCCACttatggaccaatcagcacacactctCCCATTCTGATCCCATAtaaaccctggactcagccacaTATTGGG---ACTACATGCTTTCAGGTAGACGCTAACCACTGCAGGTCCCCTCTCGTGTCAAGAGCTGTTCTGTTGttctcttctctgccttgctTATTCTCCAGTTGTCCatgtaacctcattcttcttggacatggGACAAGAACCCAGTACCTGCCAAATGGCAGGTACAAAAAATGCTG-AACA-CTGTAAACCTCCCACCCTCCGCTGGTGCCAGGCAGCTGCTCCACAGAACAGAAAGCAGTAGCAGTGGGGCCAGGTCAGCCCAGAAGCTACAAGCTGGAGTG-GGGCAGCAGGACTGAACAAGCTGTAAAACAAATGAGCTGAAACTTgctgccctc----------ccacccccattcACTGTGCCACAGGCAGTGGACAGGAGACAGAGACGTAACACTCCTTGAGGGCTCAGA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14979690 641 - 90373283 caggaggcagacacatttctaggcagacaggggtgggtccccagtaaaactgaaccttcaaaccaagcacaggttaaagcctgaaaacggagctgccagaatccacaaccagagtgagaacttcttcag----tgccttttagccaatttaatggtgctttgtccaggcccacttatggaccaatcaacacacactctcccattctgatcccatataaaccctggactcagccacatattggg---actacatgctttcaggtagaggctaaccacttaaggtcccatctcgggtcaagagctgttctgttgttctcttctctgccttgcttattctccagttgtccatgtaacctcattcttcttggacatgggacaagaacccagtacctgccaaatggcaggtacaaaaaatgctgtaaca-ctgcaaccctcccaccctctgctggtgccaggcagctgctccacgtaacaggaagcagtagcagtggggccaggtcagcccagaagttactagctggagcg-gggcagcaggactgaacaagctgtaaaacaaatgagctgaaacttgctgccctc----------ccacccccattcactgtgctgcaggcagcagataggagacagagatgtaacactccttgagggctcaga i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21907737 651 + 50472720 cagaaggcagacaaatttctaggcagacaggggtatggccccagtaaaactggatcttcaaacaaaacacagcttaaagcctgaaaactgagctgccagagtccacaacaagagtgcgaacttcctcaatggctggcttttagccaatttaatggt--tttttccaggtccatttatggacagatcagcacacagtcccccattctgatcccataaaaaccctggactcagccacacatcagg---actacacacattcaggtaggagctatctactttaggtcccctcttgtgtcaagagctgttctgttgttctcttctctgccttgctcattctccagttgtccatgtaacctcattctttttggatttgggacaagagcccagtacccaccaaagggcaggtgcaaaaggagctgtaatacctgtagccctcccaccctctgctggtgccaggcagctgctccgtgtaacaggaagcagaggcagcaaggcaaggccagcccaggagctgtgagctggagtg-gggcaggaggactgaatgagctgtaacacaaatgagctgaatcacactgtccccaccagtcccgcaacccatcttcactgtagtgcaggcagtgg---ggagagagagccgtaacagtcctttggggctcaga i calJac3.chr21 C 0 C 0 e canFam3.chr31 13794223 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I a score=563946.000000 s hg38.chr21_KI270874v1_alt 44742 236 + 166743 cctcaggactccccaagcaa----ctgtaacacccctt-gggctccacagttgctggcatctctgagttttcagaagccactgcagcctccttgtccagacactggcacccaagcagaaatgattcaagacagcacacccggaccagtcatggactgagcacagagttggcaggcactggatccaggcccatagcacaagctgagtgcaatcactgggctgagtgagaggagtaagcctag s panTro4.chr21 3657605 240 + 32799110 actcaggactccccaagcaaaagactgtaacacccctt-gggctccacagttgctggcatctctgagttttcagaagccactgcagcctccttgtccagacactggcacccaagcaaaaatgattcaagacagcacacccggaccagtcatggactgagcacagagttggcaggcactggatccaggcccatagcacaagctgagtgcaaccactgggctgagtgacaggcgtaagcctag i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16907646 240 + 48394510 cctcaggactccccaagcaaaagactgtaacacccctt-gggctccacagttgctggcatctctgagttttcaggagccactgcagcctccttgtccagacactggcacccaagcagaaatgattcaagacagcacacccggactagtcatggactgagtgcagagtcggcaggcactggatccaggcccatagcacaagctgagtgcaaccactgggctgagtgagaggagtgagcctag i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4417441 236 + 32716333 cctcaggactccccaaccaa-agactgtaacacccctt-gggctccacagttgctggcatttctgagttttcaggagccactgcagcctctttgtccagacactggcactcaagcagaaatgattcaaga---cacacccggaccagtcatggactgagtgcagagtcggcaggcactggatccaggcccatagcacaagctgagcgcaaccactgggctgagtgagaggagtgagcctag i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168531779 239 - 198365852 cctcaggactccccaagcaa--gactgtaacaccccctggggctccacagttgctggcatctctgagttttcaggagccactgaagcccccttgtccagacactggcacccaagcagaagtgattcaagacagcacacctggaccagtcatggactgagcacagagctggcaggcaccggatccaggtccatagcacaagctgagtgcaactgctgggctgaatgagaggagtgagcctag i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162194839 239 - 192294377 cctcaggactccccaagcaa--gactgtaacaccccctggggctccacagttgctggcatctctgagttttcaggagccactgcagcccccttgtccagacactggcacccaagcagaagtgagtcaagacagcacacctggaccagtcatggactgagcacagagctggcaggcaccggatccaggtccatagcacaagctgagtgcaactgctgggctgaatgagaggagtgagcctag i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150879642 239 - 180432695 CCTCAGGACTCCCCAAGCAA--GACTGTAACACCCCCTGGGGCTCCACAGTTGCTGGCATCTCTGAGTTTTCAAGAGCCACCGCAGCCCCCTTGTCCAGACGCTGGCACCCAAGCAGAAGTGATTCAAGACAGCACACCTGGACCAGTCATGGACTGAGCACAGAGCTGGCAGGCACCGGATCCAGGTCCATAGCACAAGCTGAGTGCAACTGCTGGGCTAAATGAGAGGAGTGAGCCTAG i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14980331 237 - 90373283 cctcaggactccccaagtaa--gactgtaacaccccctggggctccacagttgctggcatctc--agttttcaggagccaccgcagcccccttgtccagacactggcacccaagcagaagtgattcaagacagcacacccggaccagtcatggactgagtgcagagctggcaggcaccggatccaggtccatagcataagctgagtgcaactgctgggctgaatgagaggagtgagcctag i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21908388 0 + 50472720 C e canFam3.chr31 13794223 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I a score=2172119.000000 s hg38.chr21_KI270874v1_alt 44978 756 + 166743 cagaaaacccagtgccaagcaaagcctgagcaaaggcaccactagccacagagctttcctgctggcaaaggagcaccaaaagaatcctgtgtcatttctgggg-gtcatctgagatctgcaaaagggtaagtaaaagtggacctctttcactttcatttc-gaggcttcttgtcctcagttttttttt-ctgaaaacagataaagcgctaggcctgtagcagccagttaagaacaaatggcatggctgcagaggatagatttgtt---ggggaggactttcacaacgcaccctcttgtccccatcacccccaggtatcgagaatattggctttgttccaatccagtctcccttcacagaagtctagttatcatgtgggatcaaaataaggtcctggggcaactgaaagtatctggccaagggtacatctctgcattacctgaagcttcctgggccagccctcaatccctgacagcccattcgggtgtcagccaagaccttcaatctttcttatgg-atttttttttcctttgcagaggtcatagctcctatctcttctttatatacaatgctaagggtgttgttgcaaaccacagagataatatgactgggtagaatgagcatttggctcagtcatcaggagtataattcagaacaatgtggtatgtgtccattcttagaaactaagaggat-gtaacaattgagagttttctgtcccctgttaaaggaatcaatttgcatagggcaagagcctatttcccccc s panTro4.chr21 3657845 758 + 32799110 cagaaaacccagtgccaagcaaagcctgagcaaaggcaccactagccacagagctttcctgctggcaaaggagcatcaaaagaatactgtgtcatttctgggg-gtcatctgagatctgcaaaagggtaagtaaaagtggacctctttcactttcatttc-gaggcttcttgtcctcagttttttttttctgaaaacagataaagcgctaggcctgtagcagccagttaagaacaaatggcatggctgcagaggatagatttgtt---ggggaggactttcacaacgcaccctcttgtccccatcacccccaggtatcgagaatattggctttgttccaatccagtctcccttcacagaagtctagttatcacgtggtatcaaaataaggtcctggggcaactgaaagtatctggccaagggtacatctctgcattaccttaagcttcctgggccagccctcaatccctgacagcccattcgggtgtcagccaagaccttcaatctttcttatggcatttttttttccttcgcagaggtcatagctcctatctcttctttatatacaatgttaagggtgttgttgcaaaccacagagataatatgactgggtagaatgagcatttggctcagtcatcaggagtataattcagaacaatgtggtatctgtccattcttagaaactaagaggat-gtaacaattgagagttttctttcccctgttaaaggaatcaatttgcatagggcaagagcctatttcccccc i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16907886 758 + 48394510 gagaaaacccagtgccaagcaaagcctgagcaaaggcaccactggccacagaggtttcctgctggcaaaggagcaccaaaaggaccctgtgtcatttctggggcctcatctgagatctgcgacagggtgagtaaaagtggacctctttcactttcatttt-gaggcttcttatcctcagttttttttttctgaaaactgataaagcactaggcctgtagcagccagttaagagtgaatggcatggctgcagaggatagatttgct---ggggaagactttcacaacgtaccctcttgtccccattgcccccaggtattgagaatattggccttgttccaatccagtctcccttcacagaagtctagttatcacatgggatcaaaataaggtcctggggcaactgaaagtatctggccaagggtacatctctgcattacctgaagcttcctgggtcagccctcaatccctgacagcccattcaggtgtcagccaagaccttcaatcttccttatggcatttttttttccttcgcagcggtcatagctcc-atctcttctttatatacaatgttaagggtgttgttgcaaaccacagagataatatgactgggtagagtgagcatttggctcagtcatcaggagtataattcagaacaatgtggtatctgcccattcttagaaactaagaggat-gtaacaattgagagttttcttaccactgttaaaggaatcaatttgcatagggtaagagcctatttcccccc i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4417677 758 + 32716333 cagcaaacccagtgccaagcaaaggctgagcaaaggcaccactggccacagaggtttcctgctggcaaaggagcaccaaaagaatcctgtgtcatttctgggggctcatctgagatccgcgaaagggtgagtaaaagtggacctctttcactttcatttc-aaggcttcttgtcctcagttttttttttctgaaaacagataaagcactaggcctgtagcagccagttaagagcgaatggcgtggctgcagaggatagatttgct---ggggaggactttcacaacgcaccctcttgt-cccatcgcccccaggtattgagagtattggctttgttccaatccagtctcccttcacagaagtctagttatcacgtgggatcaaaataaggtcctggggcaactgaaagtatctggccaagggtacatctctgcattatctgaagcttcctgggccagccctcaatccctgacagcccattcaggtgtcagccaagacctttaatctttcttatgtcatttttttttcctttgcagtggtcatagctcctatctcttctttatatacaatgttaaggctgttgttgcaaaccacagagataagatgactgggtagaatgagcatttggctcagtcatcaggagtataattcagaagaatgtggtatctgtccattcttagaaactaagaggat-gtaacaattgggagttttctttcccctgtttaaggaatcgatttgcacagggcaagagcctatttcccccc i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168532018 758 - 198365852 cagcaagcccagtgccaagcaaagcctaagcaaagacaccactggccacagaggtctcctgctggcaaaggagcaccaaaagaatcctgtgtcatttctggggactcatctgagatctgcaaaagggtgagtaaaagtggacctctttcactttcatttt-gaggcttcttgtcctcagacttttttt-ctgaaaacagataaagcactaggcctctagcagccagttaagagctcatagaatggctgcagaggacagatttgct---gggggggactttgacaacgcatcctcttgcccccatcaccctcaggtattgagaatattggcttttttctaatccagtctcccttcacagaagtctagtcatcacgtgggatcaaaataaggtcctggggcaactgaaagtatctggccaaggctaaacctctgcattacctgaagcttcctgggccagccaccaatccctgacagcccattcgagtgtcagtcaagaccttcaatctttcttatggcctttttttttcttttgcagcagtcacagctcctatctcttccttatatacaatgttacgggtgttgttgcaaactacagagataatatgactgggtagcatgagcatttggctcaggcatcaggagtataattcagaacaatgtagtatctgtctaatcttagaaactaggaggat-gtaaacattgagagctttctttcccctgttaaaggaatctatttgcttaggggaagagcctatttcccccc i rheMac3.chr3 C 0 I 56 s macFas5.chr3 162195078 759 - 192294377 cagcaagcccagtgccaagcaaagcctaagcaaagacaccactggccacagaggtctcctgctggcaaaggagcaccaaaagaatcctgtgtcatttctggggactcatctgagatctgcaaaagggtgagtaaaagtggacctctttcactttcatttt-gaggcttcttgtcctcagacttttttt-ctgaaaacagataaagcactaggcctctagcagccagttaagagctcatagaatggctgcagaggacagatttgct--ggggggggactttgacaacgcatcctcttgcccccatcaccctcaggtattgagaatattggcttttttctaatccagtctcccttcacagaagtctagtcatcacgtgggatcaaaataaggtcctggggcaactgaaagtatctggccaaggctaaacctctgcattacctgaagcttcctgggccagccaccaatccctgacagcccattcgagtgtcagtcaagaccttcaatctttcttatggcctttttttttcttttgcagcagtcacagctcctatctcttccttatatacaatgttacaggtgttgttgcaagctacagagataatatgactgggtagcatgagcatttggctcaggcatcaggagtataattcagaacaatgtagtatctgtctaatcttagaaactaggaggat-gtaaacattgagagctttctttcccctgttaaaggaatctatttgcttaggggaagagcctatttcccccc i macFas5.chr3 C 0 I 1 s papAnu2.chr3 150879881 761 - 180432695 CGGCAAGCCCAGTGCCAAGCAAAGCCTAAGCAAAGacaccactggccacagaggtctCCTGCTGGCAAAGGAGCACCAAAAGAATGCTGTGTCATTTCTGGGGACTCATCTGAGATCTGCAAAAGGGTGAGTAAAAGTGGACCTCTTTCACTTTCATTTT-GAGGCTTCTTGTCCTcagacttttttt-ctgaaaacagatAAAGCACTAGGCCTCTAGCAGCCAGTTAAGAGCTCATAGAATGGCTGCAGAGGACAGATTTGCTggggggggggACTTTGACAACGCATCCTCTTGCCCCCATCACCCTCAGGTATTGAGAATATTGGCTTTTTTCTAATCCAGTCTCCCTTCACAGAAGTCTAGTCATCACGTGGGATCAAAATAAGGTCCTGGGGCAACTGAAAGTATCTGGCCAAGGCTAAACCTCTGCATTACCTGAAGCTTCCTGGGCCAGCCACCAATCCCTGACAGCCCATTCGAGTGTCAGTCAAGACCTTCAATCTTTcttatggcatttttttttcttttgcagcagCCACAGCTCCTATCTCTTCCTTATATACAATGTTACGGGTGTTGTTGCAAACTACAGAGATAATATGACTGGATAGCATGAGCATTTGGCTCAGGCATCAGGAGTATAATTCAGAACAATGTAGTATCTGTCTAATCTTAGAAACTAGGAGGAT-GTAAACATTGAGAGCTTTCTTTCCCCTGTTAAAGGAATCTATTTGCTTAGGGGAAGAGCCTATTTcccccc i papAnu2.chr3 C 0 I 1 s chlSab2.chr2 14980568 756 - 90373283 cagcaagcccagtgccaagcaaagcctgagcaaagacaccactggccacagaggtctcctgctggcaaaggagcaccaaaagaatcctgtgtcatttctggggactcatctgagatctgcaaaagggtgagtaaaagtggacctctttcactttcatttt-gaggcttcttgtcctcagacaattttt-ctgaaaacagataaagcactaggcctctagcagccagttaagagctaatagaatggctgcagaggacagttttgct---ggggggaactttgacaacacatccttttgcccccatcaccctcaggtattgagaatattga-ttttttctaatccagtctcccttcacagaagtctagtcatcacatgggatcaaaataaggtcctggggcaactgaaagtatctggccaaggctacacctctgcattacctgaagcttcctgggccagccgccaatccctgacagcccattcgactgtcagtcaagaccttcaatctttctcatggcattcttttttcttttgcagcagtcacagctcctatctcttctttatatacaatgttaagggtgttgttggaaactacagagataatatgactgggtaacatgagcatttggctcaggcatcaggagtataattcagaacaatgtagtatctgtctaatcttagaaactaggaggat-gtaaacattgagagctttctttcccctgttaaaggaatctatttgcttagggcaagagcc-atttcccccc i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21908388 742 + 50472720 cggcaaaccaagagccaaacaaagcctgagcaaaggtaccactggccaccaaggtttcctgccaggcaagcggcatcaaaagaattttgtgtcatttctggtggctcatctgagatctgcaaaagggtcagtaaaagtggacctttttcacttttattttcaaggcttcttgtcctcagattttttt--ctgaaaatagagaaagcactgggcctctagcagccagttaagagcgaatggcatgactgcagaggacagatttcct---tgagaagactttgacagcacctcctcctgtccccgttgcccccagatattaagaatattggctttgttccaatccagtctcccttcacagaagactagccatcatatggcatcagaataaggtcctggaataactgaagatatctggccaaggctacgcctctgcattacctgaagcttcctgggccagcc-ccaatccctgacagcccattagggtattggccaagacctccaatctttcttatggcagtttttttccttctgcacctgtcatggctcctaactcttctttacacacaatgttatgggtgttgctgcaaaccacagagataatatgactgggtagaatgagcatttggctcagtcctcaggagtataattcagaacaatgtggtatctgtctattcttagaaactaggaggatcataacaattgagagttttgttacccctgttaaaggtatccatttgcacagggcaC---------------- i calJac3.chr21 C 0 C 0 e canFam3.chr31 13794223 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I a score=54270.000000 s hg38.chr21_KI270874v1_alt 45734 45 + 166743 agccaccttccccttccctgcatttaaggg-----tt--------cctcccactgccc s panTro4.chr21 3658603 45 + 32799110 agccaccttccccttccctgcatttaaggg-----tt--------cccctcactgccc i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16908644 53 + 48394510 aggcaccttccccttccctgcatttaaggg-----ttccctcccaccccccacccccc i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4418435 46 + 32716333 aggcaccttccccttccctgcatttaaggg-----ttc-------ctcccctccaccc i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162195838 50 - 192294377 aagcaccttaccctcccctgcatttaagggttgtttt--------ttttttgtttgtt i macFas5.chr3 I 1 I 7 s papAnu2.chr3 150880643 45 - 180432695 AAgcaccttcccctcccctgcaTTTAAggg-----tt--------ttttgggtttgtt i papAnu2.chr3 I 1 I 9 s chlSab2.chr2 14981324 45 - 90373283 aagcaccttcccctcccctgcatttaaggg-----tt--------tttttgttttttt i chlSab2.chr2 C 0 I 2 s calJac3.chr21 21909130 38 + 50472720 -------TGTCACCTCCCTGCATTTAAGGT-----GT--------ttttgttttgttt i calJac3.chr21 C 0 C 0 e canFam3.chr31 13794223 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I e rheMac3.chr3 168532776 56 - 198365852 I a score=908726.000000 s hg38.chr21_KI270874v1_alt 45779 312 + 166743 ------------------------------------------cccgcaccttgtcaggagtcaacagcttcaccttagcattgtgcttatgatagagaagcaaccgaggagctgccctactggttgttggctgcaatttgctgaggaccacctgggactagtttaatgggtctgtgtacactcctgaggcacctttttgtcccaaattcaattccaagcttcaggttgaaggcctaaagagggaaaattagatctgagggacccagaggcagtcagagtggaaggctagggcacagcccgagtgagcatgactatccttgctaattaggccttcccacttcactgggaagaACT s panTro4.chr21 3658648 312 + 32799110 ------------------------------------------cccgcaccttgtcaggagtcaacagcttcaccttagcattgtgcttatgatagagaagcaaccgaggagctgccctactggttgttggctgcaatttgctgaggaccacctgggactagtttaatgggtctgtgtacactcctgaggcacctttttgtcccaaattcaattccaagcttcaggttgaaggcctaaaaagggaaaactagatctgagggacccagaggcagtcagagtggaaggctagggcacagcccgagtgagcatgactatctttgctaattaggccttcccacttcactgggAAGAACT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16908697 312 + 48394510 ------------------------------------------cacacaccttgtcaggaatcaacagcttcaccttagcattgtggttatgatagagaagcaaccaaggagctgccctactggttgttggctgcaatttgctgagggccacctgggactagtttaatgggtctgtgtacactcctgaggcacctttttgtcccaaattcaattccaaacttcaggttgaagacctaaaaagagaaaactagatctgagggacccagaggcagtcagagtggaaggctggggcacagccccagtgaacatgactattcctgctaattaggcctacccacttcactgggAAGAATT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4418481 312 + 32716333 ------------------------------------------cccacaccttgtcaggagtcaacagcttcaccttagcattgtgcttacgatagagaagcaaccgaggagctgccctactggttgttggctgcaatttgctgagggccacctgggactagtttaatgggtctgtgtacactcctgaggcacctttttgtcccaaattcaattcccagcttcaggttgaaggcctaaaaagggaaaactagatctgagggacccagaagcagtcagagcggaaggctagggcacagccggagtgagcatgactatccctgctaattaggccttcccacttcactgggaagaATT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168532832 311 - 198365852 ------------------------------------------tctccaccttgtcaagagtcaacGACTTCACCTTAGCATTGtgcttatgatggagaagcaacagaggagttgccctactggttgttggctgcaatttggtgagggccacctgggactagtttaatgggtctgtgtacactcctgaggcaccttattgtcccaaattc-attccaagcttcaagttgaaggcctaaaaagggaaaactagatctgagggacccagaggcagttacagcggaaggctagcgcacagcccaagtgagcatgactctccctgctaattaggccttcccacttcactgggAAGAATT i rheMac3.chr3 I 56 C 0 s macFas5.chr3 162195895 312 - 192294377 ------------------------------------------tctccaccttgtcaagagtcaacgacttcaccttagcattgtgcttatgatggagaagcaacagaggagttgccctactggttgttggctgcaatttggtgagggccacctgggactagtttaatgggtctgtgtacactcctgaggcaccttattgtcccaaattcaattccaagcttcaagttgaaggcctaaaaagggaaaactagatctgagggacccagaggcagttacagcggaaggctagcgcacagcccaagtgagcatgactctccctgctaattcggccttcccacttcactgggaagaATT i macFas5.chr3 I 7 C 0 s papAnu2.chr3 150880697 312 - 180432695 ------------------------------------------tctccatcttgtCAGGAGTCAACGACTTCACCTTAGCATTGTGCTTATGATGGAGAAGCAACAGAGGAGTTGCCCTACTGGTTGTTGGCTGCAATTTGGTGAGGGCCACCTGGGACTACTTTAATGGGTCTGTGTACACTCCTGAGGCACCTTATTGTCCCAAATTCAATTCCAAGCTTCAGGTTGAAGGCCTAAAAAGGGAAAACTAGATCTGAGGGACCCAGAAGCAGTTACAGCGGAAGGCTAGTGCACAGCCCAAGTGAGCATGACTATCCCTGCTAATTAGGCCTTCCCACTTCACTGGGAAGAATT i papAnu2.chr3 I 9 C 0 s chlSab2.chr2 14981371 312 - 90373283 ------------------------------------------tctccaccttgtcaggagtcaacgacttcaccttagcattgtgcttatgatggagaagcaacagaggagttgccctactggttgttggctgcaatttggtgagggccacctgggactagtttaatcggtctgtgtacattcctgaggcaccttattgtcccaaattcaattccaagcttcaggttgaaggcctaaaaagggaaaactagatctgagggacctagaggcagttacagcggaaagctagcgcacagcccaagtgagcatgactatacctgctaattaggccttcccacttcactgggaagaATT i chlSab2.chr2 I 2 C 0 s calJac3.chr21 21909168 348 + 50472720 tgttttgttttgttttgttttgttttgttttgttttgttttgttCCCACCATGTGAGGAGTCAacagcttcacctgagcattctgcttatgac-----agcaacagaggagcttctctactggttgttggctacaatttggtgagggtcacctggaactaatttaatgggtctatacacactcttgaggcacctttttgtcccaaattcaattcaaagcttcaggttgacgccttcaaaag-gaatactagatctgagggacccagagtcagctacagtggaaggctaaggcacagcccaagtgaccatgactgtccctgctaattcactcttcccacttcactgggAAGAACT i calJac3.chr21 C 0 C 0 e canFam3.chr31 13794223 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I a score=1026381.000000 s hg38.chr21_KI270874v1_alt 46091 302 + 166743 ATCATCA-TGACTTTGATGTGAAATCAGAATTAAGAACTAATTCTCTGAACTTACAGTGTGAAGATTACATCTGCAGAGCAGACACGCAAGTGGTTCTC--------AGGAACCATTCAGTTTTT------AAAATACAATTTCTGGCAGTATGTAAGATTGGTCATTACAAACCCTGCTCCTCTCTCCCTACCTTAATAACCAGGACCCCACTTTTCAACATTCTGAATATCACCAGTCTTAGGGAACCAAGTCCTCCACTCCATCAAACACTTCTAGAAACTGCTTCGTAAAAGTATCACTTGTGAATCCAGAAG s panTro4.chr21 3658960 302 + 32799110 ATCATCA-TGACTTTGATGTGAAATCAGAATTAAGAACTAATTCTCTGAACTTACAGTGTGAAGATTACATCTGCAGAGCAGACAGGCAAGTGGTTCTC--------AGAAACCATTCAGTTTTT------AAAATACAATTTCTGGCAGTATGTAAGATTGGTCATTACAAACCCTGCTCCTCTCTCCCTACCTTAATAACCAGGACCCCACTTTTCAACATTCTGAATATCACCAGTCTTAGGGAACCAAGTCCTCCACTCCATCAAACACTTCTAGAAACTGCTTCATAAAAGTATCACTTGTGAATCCAGAAG i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16909009 302 + 48394510 TTCATCT-TGACTTTCATGTGAAATCAGAATTAAGAACTAATTCTCTGAACTTGCAGTGTGAGGATTACATCTGCAGAGCAGACAGGCAAGTGGTTCTC--------AGAAACCATTCAGTTTTT------AAAATACAATTTCTGGCAGTATGTAAGATTGGTCATTACCAACCCTGCTCCTCTGTCCCTACCTTAATAACCAGGACCCCACTTTTCAACATTCTGAATATCACCAGTCTTAGGGAACCAAGTCCTCCACTCCATCAAACACTTCTAGAAACTGCTTTGTAAAAGTATCACTTGTGAATCCAGAAG i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4418793 293 + 32716333 ATCATCA-TGACTTTGATGTGCAATCAGAATTAAGAACTAATTCTCT---------GTGTGAGGATTACATCTGCAGAGCAGACAGGCAAGTGGTTCTC--------AGAAACCATTCAGTTTTT------AAAATACAATTTCTGGCAGTATGTAAGACTGGTCATTACGAACCCTGCTCCTCTGTCCCTACCTTAATAACCAGGACCACACTTTTCAACATTCTGAATATCACCAGTCTTAGGGAACCAAGTCCTCCACTCCATCAAACACTTCTAGAAACTGCTTCGTAAAAGTATCACTTGTGAATCCAGAAG i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168533143 302 - 198365852 ATCATCA-TGACTTTGATGTGAAATCAGAATTAAGAACTAATTCTCTGAACTTACAGTGTGAGGATTACATCTACAGAGCAGACAGGCAAGTGGTTCTC--------AGAAACCATTCAGTTTTT------AAAATACAATTTCTGGCAATATGTAAGATTGCTCATTATGGACCCTGCTCTTCTGTCCCTACCTTAATAACCAGGACCCCACTTTTCAACATTCTGAATATCACCAGTCTTAGGGAACCAAATCCTCCACTCCATCAAACACTTCTAGAAACTTCTTTGTAAAAGTGTCACTTGTGAATCCAGAAG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162196207 302 - 192294377 ATCATCA-TGACTTTGATGTGAAATCAGAATTAAGAACTAATTCTCTGAACTTACAGTGTGAGGATTACATCTACAAAGCAGACAGGCAAGTGGTTCTC--------AGAAACCATTCAGTTTTT------AAAATACAATTTCTGGCAATATGTAAGATTGCTCATTATGGACCCTGCTCTTCTGTCCCTACCTTAATAACCAGGACCCCACTTTTCAACATTCTGAATATCACCAGTCTTAGGGAACCAAATCCTCCACTCCATCAAACACTTCTAGAAACTTCTTTGTAAAAGTGTCACTTGTGAATCCAGAAG i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150881009 302 - 180432695 ATCATCA-TGACTTTGATGTGAAATCAGAATTAAGAACTAATTCTCTGAACTTACAGTGTGAGGATTACATCTACAGAGCAGACAGGCAAGTGGTTCTC--------AGAAaccattcagttttt------aaaatacaagttctGGCAATATGTAAGACTGCTCATTATGGACCCTGCTCCTCTGTCCCTACCTTAATAACCAGGACCCCACTTTTCAACATTCTGAATATCACCAGTCTTAGGGAACCAAATCCTCCACTCCATCAAACActtctagaaacttctttgtaaaagTGTCACTTGTGAATCCAGAAG i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14981683 302 - 90373283 ATCATCA-TGACTTTGATGTGAAATCAGAATTAAGAACTAATTCTCTGAACTTACAGTGTGAGGATTACATCTACAGAGCAGACAGGCAAGTGGTTCCC--------AGAAACCATTCAGTTTTT------AAAATACAATTTCTGGCAGTATGTAAGACTGCTCATTATGAACCCTGCTTCTCTGTCCCTACCTTAATAACCAGGACCCCACTTTTCAACATTCTGAATATTACCAGTCTTAGGGAACCAAATCCTCCACTCCATCAAACACTTCTAGAAACTTCTTTGTAAAAGTGTCACTTGTGAATCCAGAAG i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21909516 299 + 50472720 GTCATCATTGACTTTGATGTAAAACAAA----AAGAGCTAATTCTCTGAACTTACAGTGGGAGGATTACATCTACAGTGCAGACAGGCAAGTGGTTCTC--------AGAAACCACTTAATTTTT------AAAATACAATTTCTGGCAGTATGTAAGATTGGCCATTATGGATCCTGCTCCTCTGTCCCTACCTTAATCACCAGGACCCGACTTTTCAACCTTTTGAATATCACCAGTCTTAGGGAACCAAGTCCTCCACTCCATCAAATACTTCTAGAAACTGCTTCATAAAAGCATTGCTTATGAATCCAGAAG i calJac3.chr21 C 0 C 0 s canFam3.chr31 13794223 313 + 39895921 ATCCCAG-GGACTTTAATGTAAAATCAGAATTAAGACCTAA--CTCTGAATTCCCAGTATGAGGATCATGCCTCCAAAATACATTGGCAAGTAGTTTTCAACTTAAAAGAAAATATCTCTCCTCTGCACCAGAAAAAAAATTCCCTCCAATATGGAAGACTGGCCACTATCAACCTACCCCCTTTACCCCTACCTTGATCACCAGTACCGTACTTCTCAACATTCTGCATATTATCAGCCTTTGCAAACAAAATTCCTTACCCCATCAAACACTTCTACAGTCTTCCTTACAAAAATATCTC-CATGATTCCAGAAA i canFam3.chr31 C 0 C 0 e mm10.chr16 78096641 555 + 98207768 I a score=1170570.000000 s hg38.chr21_KI270874v1_alt 46393 403 + 166743 AACTGACtgacagagcaggagcatcatcatcttggacaagtccctcattctaaagttcaccttaat---aaaaaccacctaaatccaaagggtatcagcctaatggctaaggtcagcatgaccataaaccacaaataacatctccaaccagaaacattccaaactcctccacaaccagggacatgctag-ccccgagataaacaccactccag--------------gcc----------------------agaaggatgtctgccccaagataacctcccctcctcgcaaagagattccaaccctgtcataaacttcccca-acacataaatattccaagttgtaataagccccccctccctaagaccaatatatactcttagtctgtaagagaaaactctcctgactgatatcagccaggagtgcctctcaggttttaact s panTro4.chr21 3659262 403 + 32799110 AACTGACtgacagagcaggagcatcatcatcttggacaagtccctcattctaaagttcaccttaat---aaaaaccacctaaatccaaagggtatcagcctaatggctaaggtcagcatgaccataaaccacaaataacatctccaaccagaaacattccaaactcctccacaaccagggacatgctag-ccctgagataaacaccactccag--------------gcc----------------------agaaggatgtctgccccaagataacctcccctccttgcaaagagattccaaccctgccataaacttctcca-acacataaatattcgaagttgtaataagctccccctccctaagaccaatatatactcttagtctgtaagagaaaactctcctgactgatatcagccaggagtgcctctcaggttttaact i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16909311 402 + 48394510 AACTGACtgacagagcaggagcatcaccatcttggacaagtccctcattctaaagttcaccttaat---aaaaaccacctaaatccaaagggtatcagcctaatggctaaggtcagcttgaccataaaccacaaataacatctccaaccagaaacattccaaactcctccacaactagggacatgctagcccccgagataaaccccactccag--------------gcc----------------------agaaggatgtctgccccaagataacctcccctcctcgcaaagagattccaatcctgccataaacttctcca-acacataaatattccaagttgtaataagccccccctctctaagaccaatatatactcttagtctgtaagagaaaa--ctcctgactgaaatcggccaggagtgcctctcaggttttaact i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4419086 403 + 32716333 AACTGACtgacagagcaggagcatcaccatcttggacaagtctctcattctaaagttccccttaat---aaaaaccacctaaatccaaagggcatcagcctaatggctaaggtcagcatgaccataaaccacaaataacatctctaaccagaaacatcccaaactcctccacagccagggacatgctag-tcccgagataaaccccactccag--------------gcc----------------------agaaggctgtctgccccaagataacctcccctcctcacaaagagattccaaccccgccataaacttttcca-acacataaacattccaagttgtaataagcccccccaccctaagaccaatatatactcttagtctgtaagagaaagctctcctgactgaaatcggccaggagtgcctctcaggttttaact i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168533445 402 - 198365852 AAGTGACtgacagagcaggagcatcaccatcttggacaagtccctcattctgaagttcaccttaac---agaagccacctaaatccaaagggcatcagcctaatggctaagcccagcatgaatataaaccacaaataacatctccaaccagaaacatgccaaactcctccacaaccagggacatgctag-ccccaaggtaaatcccactccag--------------gcc----------------------agaaggatgcctgccccaagacaacc-cccctcctcccagagagattccaaccccgccataaacttctcca-acacataaacattccaggttgtaataagccctcccaccctaaaaccaatatatactcttagtctgtacgagaaagcgctcctgactgaaatcggccagcagcgcctctcaggttttaact i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162196509 402 - 192294377 AAGTGACtgacagagcaggagcatcaccatcttggacaagtccctcattctgaagttcaccttaac---agaagccacctaaatccaaagggcatcagcctaatggctaaggtcagcatgaatataaaccacaaataacatctccaaccagaaacatgccaaactcctccacaaccagggacatgctag-ccccaaggtaaatcccactccag--------------gcc----------------------agaaggatgcctgccccaagacaacc-cccctcctcccagagagattccaaccccgccataaacttctcca-acacataaacattccaggttgtaataagccctcccaccctaaaaccaatatatactcttagtctgtacgagaaagcgctcctgactgaaatcggccagcagcgcctctcaggttttaact i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150881311 402 - 180432695 AAGTGACTGACAGAGCAGAAGCATCATCATCTTGGACAAGTCCCTCATTCTGAAGTTCACCTTAAC---AGAAGCCacctaaatccaaagggcatcagcctaatggctaaggtcagcatgaatataaaccacaaataacatctcCAACCAGAAACTTGCCAAACTCCTCCACAACCAGGGACATGCTAG-CCCCAAGATAAATCCCACTCCAG--------------GCC----------------------AGAAGGATGCCTGCCCCAAGACAACC-TCCCTCCTCCCAGAGAGATTCCAACCCTGCCATAAACTTCTCCA-ACACATAAACATTCCAGGTTGTAATAAGCCCTCCCACCCTAAAACCAATATATACTCTTAGTCTGTACGAGAAAGCGCTCCTGACTGAAATCGGCCAGCAGCGCCTCTCAGGTTTTAACT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14981985 402 - 90373283 AAGTGACtgacagagcaggagcatcaccatcttggacaagtccctcattctgaagttcaccttaac---agaagccacctaaatccaaagggcatcagcctaatggctaaggtcagcatgaatacaaaccacaaataacatctccaaccagaaacatgctaaacatctccacaaccagggacatgctag-ccccgagataaatcccactccag--------------gcc----------------------agaaggatgcctgccccaagacaagc-tccctcctcccagagagattccaaccccgccataaacttctcca-acacataaacattccaggttgtaataagccctcccaccctaaaaccaatatatactcttagtctgtacgagaaagcgctcctgactgaactcagccagcagcgcctctcaggttttaact i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21909815 443 + 50472720 AACTGACtgacagagcaggagcgtcaccatcttggacaagtccatcattctaaaattcaccttattttaaatgaccacctaagtccaaagggcatcagcctaatggccaaggtcagtatgaccataaaccacaagaaacatctccaatcagaaacattccaaactcctcctcaaccagagacatgctaa-ccccaaaataaagccccctccagctaggaagctgctagccccaagataaccccctccaaagtggaaggatgtctgccccaagacaacatcccctcctcctcgagagattccaaccctgccataaacttctccacacctataaacattccaagttgtaataagccccctcaccctaaaactaatttatactctcagtctgtaagagaaagtgctcctgaccaaaattggccagtggcacctctcaggttttaact i calJac3.chr21 C 0 C 0 e canFam3.chr31 13794536 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I a score=250754.000000 s hg38.chr21_KI270874v1_alt 46796 471 + 166743 aaagaaaacctgtcttAgtgttctcattgctcaattcccacctatgagtgagaacatgcggtggttggttttctgtccttgtgatagtttgctcagaatgatggtttccagcttcttccacatccttacaaagtaaatgaactcatccttttttatggctgcatagtattccatggtgtatatgtgccacattttcttaatccagtctatcattgatggacacttgggttggttccaagtctttgctattgtgaatagtgccaaaataaaggacataggatggggaacatcacacaccggga-ctgtcgtagggtcgggggaggcgggagggatagcattaggagatatacctaatgtaaatgatgagttaatgggtgcatcacaccaacatggcacatgtatacatatgtaacaaacctgcatgttgtgcatacgtaccctagaacttaaagtataatttaaaaaaaggaa s panTro4.chr21 3659665 471 + 32799110 aaagaaaacctgtcttAgtgttctcattgctcaattcccacctatgagtgagaacatgcggtgtttggttttctgtccttgtgatagtttgctcagaatgatggtttccagcttcttccacatccttacaaagtacatgaactcatccttttttatggctgcatagtattccatggtgtatatgtgccacattttcttaatccagtctatcattgatggacacttgggttggttccaagtctttgctattgtgaatagtgccacaataaaggacataggatggggaacatcacacaccagga-ctgtcgtagggtcgggggaggcgggagggatagcattaggagatatacctgatgtaaatgatgagttaatgggtgcatcacaccaacatggcacatgtatacatatgtaacaaacctgcatgttgtgcatacgtaccctagaacttaaagtataatttaaaaaaaggaa i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16909713 470 + 48394510 aaagaaaacctgtcttAgtgttctcattgctcaattcccacctatgagtgagaacatgcggtgtttgtttttctgtccttgtgatagtttgctcagaatgatggtttccagcttcatccacatccttacaaagtacatgaactcatccttttttatggctgcatagtattccatggtgtatatgtgccacattttcttaatccagtctatcattgatggacacttgggttggttccaagtctttgctattgtgaatagtgccacaataaaggacacaggatggggaatatcacacaccggga-ctgtcgtagggttgggggaggcaggaaggatagcattaggagatatacctaatgtaaatgatgagttaatgggtgcagcacaccaacatggcacatgtatacatatgtaacaaacctgcacgttgtgcacatgtaccctagaacttaaagtataattttaaaaaagg-a i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4419489 472 + 32716333 aaagaaaacctgccttAgtgttctcattgctcaattcccacctatgagtgagaacatgcagtgtttggttttctgtccttgtgatagtttgctcagaatgatggtttccagcttcatccatgtccttacaaagtacatgaactcatccttttttatggctgcatagtattccatggtgtatatgtgccacattttcttaatccagtctatcattgatggacacttgggttggttccaagtctttgctattgtgaatagtgccacaataaaggacttgggatggggaacatcacacaccggggcctgtcatggggtggggggaggcgggagggatagcattaggagatatacctaatgtaaatgacgagttaatgggtgcagcacaccaacatggcacatgtatacatatgtaacaaacctgcacgttgtgcacatgtaccctagaacttaaagtataatttaaaaaaaagaa i nomLeu3.chr25 C 0 C 0 e calJac3.chr21 21910258 0 + 50472720 C e canFam3.chr31 13794536 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I e rheMac3.chr3 168533847 0 - 198365852 C e chlSab2.chr2 14982387 0 - 90373283 C e macFas5.chr3 162196911 0 - 192294377 C e papAnu2.chr3 150881713 0 - 180432695 C a score=2548.000000 s hg38.chr21_KI270874v1_alt 47267 1 + 166743 a s panTro4.chr21 3660136 1 + 32799110 a i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16910183 1 + 48394510 a i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4419961 1 + 32716333 a i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168533847 1 - 198365852 a i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162196911 1 - 192294377 a i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150881713 1 - 180432695 A i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14982387 1 - 90373283 a i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21910258 0 + 50472720 C e canFam3.chr31 13794536 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I a score=173608.000000 s hg38.chr21_KI270874v1_alt 47268 62 + 166743 aAGAaaacctgtctttaactgccagccacatttcatgtttctttcctctttctttaactctt s panTro4.chr21 3660137 62 + 32799110 aAGAaaacctgtctttaactgccagccacatttcatgtttctttcctctttctttaactctt i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16910184 62 + 48394510 aaGAaaacctgtctttaactgccagctgcatttcatgtttctttcctctttctttaactctt i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4419962 62 + 32716333 aAGAaaacctgtctttaactgccagccgcatttcatgtttctttcctctttctttaactctt i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168533848 62 - 198365852 aaggaaaccagtctttaactgccagccacatttcatgtttctttcctctttctttaactctt i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162196912 62 - 192294377 aaggaaaccagtctttaactgccagccacatttcatgtttctttcctctttctttaactctt i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150881714 62 - 180432695 AAGGAAACCAGTCTTTAACTGCCAGCCACATTTCATGTTTCgttcctctttctttaactctt i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14982388 62 - 90373283 aaggaaacctgtctttaactgccagccgcatttcatgtttccttcctctttctttaactctt i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21910258 47 + 50472720 aagaaaatctgtccttaactgccagccacactttgtgttgctttcct--------------- i calJac3.chr21 C 0 C 0 e canFam3.chr31 13794536 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I a score=15656.000000 s hg38.chr21_KI270874v1_alt 47330 5 + 166743 aAACT s panTro4.chr21 3660199 5 + 32799110 aAACT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16910246 5 + 48394510 aAACT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4420024 5 + 32716333 aAACT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168533910 5 - 198365852 aAACT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162196974 5 - 192294377 aAACT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150881776 5 - 180432695 aaaCT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14982450 5 - 90373283 aAACT i chlSab2.chr2 C 0 C 0 s canFam3.chr31 13794536 5 + 39895921 AAATT i canFam3.chr31 C 0 C 0 e calJac3.chr21 21910305 0 + 50472720 C e mm10.chr16 78096641 555 + 98207768 I a score=2060285.000000 s hg38.chr21_KI270874v1_alt 47335 602 + 166743 GACTATGTTCAATAATAAAGTCAATAAACAGGTCAAATAATATAAAC------ATCCAGTTGATGTTTTCTGAATGTTAAATTTGTAAGACAAAGAGTTCTACAATTCTATGGAAC----A--GGG-------ATATGAAAGATAGTGGGAAGTAGGGAGAACA-TCAAAGATTCAAATGTTCATAGGTCTGTAGGTCTTTGTCAGATATTTATGACATGTT-------CTCAGGACACTGAACAAGAGCCAGTGT-TTGAGTTCTTAGAATAAAGCAAATCCAAAAACAT-TAGTTTtcagagcttgaatagaccttagagatcacc-aaaccaaactccttattttatgaactagaaaactgcagtgctaaga-aaaacaaaaccagatatgattagcttatacagttagttggagatatgggatttgaatgcaggtttcttgattcatggac---cagtcA--TTCTTTGGCAGTTTTAGTT-CTACCTCTTCAGAGCAACCACAAATTATTTGAGAGAG-----------TTGTCCTGTCTTCTTTATCAATACAAAGTATGCAATCTACAGGTAAAGTCCATTTAAGGAAG--TTTAAATTACTCCTCTCGGCCTCTTAAGTTGTTCAGAGACAATCTCGGCACCAT s panTro4.chr21 3660204 602 + 32799110 GACTATGTTCAATAATAAAGTCAATAAACAGGTCAAATAATATAAAC------ATCCAGTTGATGTTTTCTGAATGTTAAATTTGTAAGACAAAGAGTTCTACAATTCTATGGAAC----A--GGG-------ATATGAAAGATAGTGGGAAGTGGGGAGAACA-TCAAAGATTCAAATGTTCATAGGTCTGTAGGTCTTTGTCAGATATTTATGACATGTT-------CTCAGGACACTGAACAAGAGCCAGTGT-TTGAGTTCTTAGAATAAAGCAAATCCAAAAACAT-TAGTTTtcagagcttgaatagaccttagagatcacc-aaaccaaactccttattttatgaactagaaaactgcagtgctaaga-aaaacaaaaccagatatgattagcttatacagttagttggagatatgtgatttgaatgcaggtttcttgattcatggac---cagtcA--TTCTTTGGCAGTTTTAGTT-CTACCTCTTCAGAGCAACCACAAATTATTTGAGAGAG-----------TTGTCCTGTCTTCTTTATCAATACAAAGTATGCAATCTACAGGTAAAGTCCATTTAAGGAAG--TTTAAATTACTCCTCTCAGCCTCTTAAGTTGTTCAGAGACAATCTCAGCACCAT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16910251 601 + 48394510 GACTATGTTCAATAATAAAGTCAATAAACAGGTCAAATAATATAAAC------ATCCAGTTGATGTTTTCTGAATGTTAAATTTGTAAGACAAAGAGTTCTACAATTCTATGGAAC----A--GGG-------ATATGAAAGATAGTGGGAAGTGGGGAGAACA-TCAAAGATTCAAATATTCATAGGTCTATAGGTCTTTGCCAGATATTTATGACATGTT-------CTCAGGACACTGAACAAGAGCCAGTGT-TTGAGTTCTTAGAATAAAGCAAATCCAAAAACAT-TAGTTTtcagagcttgaatagaccttagagatcacc-aaaccaaactccttattttatgaactagaaaact-cagtgctaaga-aaaacaaaaccagatatgattagcttatacagttagttggagatatgggatttgaatgcaagtttcttgattcatggac---cagtcA--TTCTTTGGCAGTTTTAGTT-CTACCTCTTCAGAGCAACCACAAATTATTTGAGAGAG-----------TTGTCCTGTCTTCTTTATCAATACAAAGTATGCAATCTATAGGTAAAGTCCATTTAAGGAAG--TTTAAATTACTCCTCTCAGCCTCTTAAGTTGTTCAGAGACAATCTCAGCACCAT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4420029 600 + 32716333 GACTATGTTCAATAATAAAGTCAATAAACAGGTCAAATAATATAAAC------ATCCAGTTGATGTTTTCTGAATGTTAAATTTGTAAGACAAAGAGTTCTACAATTCTATGGAAC----A--GGG-------ATATGAAAGATAGTGGGAAGTGGGGAGAACA-TCAAAGATTCAAATATTCATAGGTCTCTAGGTCTTTGCCAGATATTTATGACATGTT-------CTCAGGACATGGGACAAGAGCCAGTGT-TTGAGTTCTTAGAATAAAGCAAATCCAAAAACAT-TAGTTTtcagagcttcaatagaccttagagatcacc-aaaccaaactcctaattttatgaactagaaaactgcagtgctaaga-aaagcaaaaccagatatgattagcttatacagttagttggagatatgggatttgaatgcaggtttcttgattcatggac---cagtcA----CTTTGGCAGTTTTAGTT-CTACCTCTTCAGAGCAACCACAAATTATTTGACAGAG-----------TTGTCCTGTCTTCTTTATCAATACAAAGTATGTAATCTATAGGTAAAATCCATTTAAGGAAA--TTTAAATTACTCCTCTCAGCCTCTTAAGTTGTTCAGAGACAATCTCGGCACCAT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168533915 598 - 198365852 GACTATGTTCAATAATAAAGTCAATAAACAGGTCAAATAATATAAAC------ATCCAGTTGATGTTTTCTGAATGTTAAATTTGTAAGACAACAAGTTCTACAATTCTATGGAAC----A--GGG-------ATATGAAAGGTAGTGGGAAGTGGGGAGAACATTCAAAGATTCAAATCTTCA--------TAGGTCTTTGCCAGATATTTATGACATGTT-------CTCAGGACACTGAACAACAGCAAGTGT-TTGAGTTCTTAGAATAAATCACATCCAAAAACAT-TAGTTTtcagagcttgaatagaccttagagatcatcaaaaccaaactccttattttatgaactagaaaactgcagtgctaaga-aaaacaataccagatatgattagcttatacagttagttggagatgggggatttgaatgcaggtttcttgaTGCATGGAC---CAGTCA--TTCTTTGGTAGTTTTAGTT-CCACCTCTTCAGAGAAACCACAAATTATTTGAGAGAG-----------TTGTGCTGTCATCTCTATCAATACAAAGTGTGCAATCTATAGGTAAAGTCTATTTAAGGAAGCTTTTAAATTACTCCTCTCAGCCTCTTAAGTTGTTCAGAGACAATCTCGACTCCAT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162196979 598 - 192294377 GACTATGTTCAATAATAAAGTCAATAAACAGGTCAAATAATATAAAC------ATCCAGTTGATGTTTTCTGAATGTTAAATTTGTAAGACAACAAGTTCTACAATTCTATGGAAC----A--GGG-------ATATGAAAGGTAGTGGGAAGTGGGGAGAACATTCAAAGATTCAAATCTTCA--------TAGGTCTTTGCCAGATATTTATGACATGTT-------CTCAGGACACTGAACAACAGCAAGTGT-TTGAGTTCTTAGAATAAATCACATCCAAAAACAT-TAGTTTtcagagcttgaatagaccttagagatcatcaaaaccaaactccttattttatgaactagaaaactgcagtgctaaga-aaaacaataccagatatgattagcttatacagttagttggagatgggggatttgaatgcaggtttcttgaTGCATGGAC---CAGTCA--TTCTTTGGTAGTTTTAGTT-CCACCTCTTCAGAGAAACCACAAATTATTTGAGAGAG-----------TTGTGCTGTCATCTCTATCAATACAAAGTGTGCAATCTATAGGTAAAGTCTATTTAAGGAAGCTTTTAAATTACTCCTCTCAGCCTCTTAAGTTGTTCAGAGACAATCTTGACTCCAT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150881781 598 - 180432695 GACTCTATTCAATAATAAAGTCAATAAACAGGTCAAATAATATAAAC------ATCCAGTTGATGTTTCCTGAATGTTAAATTTGTAAGACAACAAGTTCTACAATTCTATGGAAC----A--GGG-------ATATGAAAGGTAGTGGGAAGTGGGGAGAACATTCAAAGATTCAAATCTTCA--------TAGGTCTTTGCCAGATATTTACGACATGTT-------CTCAGGACACTGAACAACAGCAAGTGT-TTGAGTTCTTAGAATAAATCACATCCGAAAACAT-TAGTTTTCAGAGCTTGAATAGACCTTAGAGATCATCAAAACCAAACTCCTTATTTTATGAACTAGAAAACTGCAGTGCTAAGA-AAAACAATACCAGATATGATTAGCTTATACAGTTAGTTGGAGATGGGAGATTTGAAGGCAGGTTTCTTGATGCATGAAC---CAGTCA--TTCTTTGGTAGTTTTAGTT-CCACCTCTTCAGAGAAACCACAAATTATTTGAGAGAA-----------TTGTGCTGTCATCTCTATCAATACAAAGTGTGCAATCTATAGGTAAAGTCTATTTAAGGAAGCTTTGAAATTACTCCTCTCAGCCTCTTAAGTTGTTCAGAGACAATCTCGACtccat i papAnu2.chr3 C 0 I 312 s chlSab2.chr2 14982455 596 - 90373283 GACTATATTCAATAATAAAGTCAATAAACAGGTCAAATAATATAAAC------ACCCAGTTGATGTTTTCTGAATGTTAAATTTGTAAGACAACAAGTTCTACAATTCTATGGAAC----A--GGG-------ATATGAAAGATAGTGGGAAGTGGGGAGAACATTCAAAGATTCAAATCTTCA--------TAGGTCTTTGCCAGATATTTACGACATGTT-------CTCAGGACACCGAACAACAGCGAGTGT-TCGAGTTCTTAGAATAAATCACATCCAAAAACAT-TAGTTTtcagagcttgaatagaccttagagatcatcaaaaccaaactccttattttatgaactagaaaactgcagtgctaaga-aaaacaataccagatatgattagcttatacagttagttggagatgggggatttgaatgcaggtttcttgaGGCATGGAC---CAGTCA--TTCTTTGGTAGTTTTAGTT-CCACCTCTTCAGAGAAACCACAAATTATTTGAGAGAG-----------TTGTGCTGTCATCTCTATCAATACAAAGTGTGCAATCTATAGGTAAAGTCTATTTAAGGAAG--TTTAAATTACTCCTCTCAGCCTCTTAAGTTGTTCAGAGACAATCTCGACTCCAT i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21910305 591 + 50472720 --cAATGTTCAGTAATCAAGTCAATAAACAGGTCAAAAAATATAAAC------ATCCAGTTGATGTTTTCCGAATATTAAATTTGTAAGACAAAGAGCTCTACAGTTCTATGGAACAGGGA--GGG-------ATATGAAAGACAGCGGGAAGTGGGGAGAACATTCAAATAGTCAAATGTTTA--------TAGGTCTTTGCCAGATATTTATGACATGTT-------CTCAGGACACTGAATAAGAGCAAGTGT-TTGAGTTCTTAGAATAAAACAAATGCaaaatcat-tagttttcagaacttgaagagaccttagagatcatcaaaaccaaactccttgttttatgaactagaaaactgcagtgataaga-aaaa----aatatatatgattagccaatgccattagtaggagataaggtatttgaatgcaggtttcttgattcacgaac---cagtcA--TTCTTTGGGAGTTTCAGTT-CTACCACTTCAGAGCAACCACAAATTATTTG--AGAG-----------TGGTTCTGTCTTCTTCATCAAT-CAAAGCGTGCAATCTATAGGTAAAGTCCATTTAAGGAAG--CTTAAATTACTCCTCTTGGCCTCCTAAGTTGTTCAGAGACAGTCTTGACACCAT i calJac3.chr21 C 0 C 0 s mm10.chr16 78097196 558 + 98207768 GAATATGAGCAGTGATCAAATCAAT----AGGTGAGATCACACCAACTCAGTTGTCCAAGTGATACCTTCTAAATGTGAAGCTTGTAAGGCACAGATGTCAACAGTTCTATGGATC----ATCTAG-------GAAAGAAACACAAGGAGAAG-AGGAAGAAAG-CC-----TTCAGGTGCCTA--------CAGCCCTGGTCCAGATATCGATTATAC-TT-------CTCTGTACCCTGAATAAGAATGAACATCTTCCTTTCCTAGAGTAAGCCGAACACAGAACCATGGATTTTTCAGAGCATGAAGAG----------------------AACTCCTATTTTGATAGAACAGACAACTGCTGGACAAAGGCGAGGTTGGAGAGGACATGATTCGTGTACAGAACTACGTGAAGGTCAGGTACTCGCGTGCAGGATTTTTGGTTCACAGACGTTCATCCACTCTCTTTGGATTCCTCAGTT-GCAGTCCTTTAAAGCAACTGTAAATTGTTTGTGAGTAAAAATTCACCCCTCTACTTTTTTTTTTAACTCCACAAAGTATGTG--CCACAGGGAAAGCTTGT---ATGAAG--TTTAACTTACTCCCCTTAGC-----------------AGCAGTGT--------- i mm10.chr16 I 555 C 0 s canFam3.chr31 13794541 592 + 39895921 GATTATGTTCAATAATCAAGGCAATCAACAGGTCAAGTAGTATAAACTGAGTTGTCCAATTAATGTTTTCCAAATATAAAACTTAAAGGGCACAGATTTCTACAATTCTATAGAAC----A--GAGAACAGAAATATGAAAAGC--TGGTAAGAGGGGAGGGGC-------ACTCAAATATTCAC-------AAGGTCT--GCCAGATATTTATTACATATTTCTTATATTCAGTACACTGAGATGGCACAGGTGT-TTCAGTTCTTAGAATAAAGCAAACATACAAACCA-CTATTTtcagagtttgaggagaccttaggaatcacccaaaccaacctccatattatacaggctacaaaagtgcagtgctaaga-agaa----aacagatatgactagctcatacagttagctgcagatgtgggaattgaatgcatgt---ttgattcatgggc---cagttg--tccttttccagttatacttccCATGTCTTCACGGCAACTGCAAA----TTGAGAAAT-----------CTATCCT----TTTTTAAAAACACAAAGCACGCAAACTATAAGTACAGCCCAGATGAGGAAG--TTTAAGTTACTCCTTTTGACTTTCTAAATCGTTCCAATATAACCCTAGCACCAT i canFam3.chr31 C 0 C 0 a score=9480248.000000 s hg38.chr21_KI270874v1_alt 47937 2473 + 166743 GAAATATGTTTTCTACTTAGTCTCATAGTATCCTCTTGATTTAATACTATGGAGATAGGTTGAATATCTCA--AAAACATGACTTA--AGAA-GACACCAAGGGTCA----------------CCGGCCAATGTTCCTCC-TACAGAAACAAAGAATTCAATCTTATAGATAACTCAAGAGAAT----------------------------------------------------------------AGAATCTCCTCAT------------GATCATTCCC--TCCCACTTTTC----------------ATTCTGT-TCTTCTTTGCTGCTTTTA--------------------------AACTCCTTTCCATTTCCC----------------------------------CTTTGC-------------------------------------------------------------TTCTTTATATCTCTCTG---------CTCAAATACATACCAGAAACATTGGGACCAAGTCAGAGGTTTGAAGACTGAA-TATTCTTTTCCCTTTGCTCACCACAGGGACTCCACCTATTCATCCTAA-CCAAAATATATGAACAAG-CTGCAACTCACTGCCTACTTTCTATTAGTTCCATTCTCATTTGTTTTAAGGCCTCGGAATATTGCATATGGATAATAACA-TAAAAAGTAATAAGTCCTCTCACAATTCCTTGTGAAATAAAAATCTAGCAA-TGGGGGTGGGGAGGATTGACAGTCTAATCATCTATTATAATAGCAGTATT----T-TGTT---------TTTTGTTTTAAACAAACTGCAGTTTGGA-ATAGCAATCTGTTTTGTTTATCATGTCAAGTTCTTATGAAAGTATTTCAGTTGGATTTCACCCAAAATCTATAACACACCATGTAATACATAATTTTGCTGTCATATGGTTGCAAATTTTGACACTTATTTTGCCAG-AAAATACAGGTATGAATATGAAAGAGGCCCCC-TCAGAGATTTATTGCTTAGTATCCCAGTAGTTCCTCAGTCTTTCTTTGTCGAAGCTCAACCAGC--CAGTATTTTACCAAGCAGATTTTGTTGCCCTTTGTTTCTGTTTAGATTTCCTTAAAAATTACCCTTC--AAAAAATCCATAGGCTAA-T-TTTTTTTATTTTTATTGCTAATTGTTCCTAATTCTTC----AACATTAAATGGTATAAACTGTCTT------------GGATA------TTCATAGCT-AAAATAAATGCAGACAA-TTTTACAATTTCCTT-GAATGGTCATGGT-----TGT--------ACAATGAA------------ACTTTTTGTTACTC------------TTTCAATTGCACATAAAAATTACTCTTTTTCTCTTTGTCTATCTACCTCAAAATTCTTTGTTTCAAGTATAC---AAATGAGTCATTAGTGAAAGCAAAATGGGTACTTTTT----ATCTAAGGAAGGTTAAAA--CTTAACTTA-----CTTTAAAATTCAGCATTTTCTGGGTTAAATTAGAACACTACTTCAATATCTGCAATTCAAATAAGTCCTCTGAGAAATTGGCCTCCATAACCAGTGACGTGCTGCTGAACTGAACAGATCTCCAAAATATCCTAACAGATTTCTTTCTTTCATTGTAGAATTGTTTCCATCTGGTGCTTAGATATTAAACCTGGAATATGTAAAGGCTCTCCTCTCTCACCCTGTTTGACTTCCAAATGCTGGCAAATAATTTGCATTGTCAATGAATTGAGGATTAAAATTTTGAACTTAACTGAGTAGCTGCAAGATGCAAA-ATTTAAAGTGATAGATCTTCAAAGTAGTGAATTTTTC--TCTTTTAATTTTGAGAAATGGAGACTTGAAATGTTACTTGTTTGTAGAACATTCTAATTTGAACTTTATTTGCTT-AAAAAGAATAAAAATTTTCTCAATTTTTATCCCAAGTTCAGGATATCAAAACATGAATTTATGAACAGTATTATAGGCCAAATTTT---------TGAGTACTT-----AAATCAGAATATTAGCATCTAA---------------AAATACTTGCATGCATATATTT-CAAGAGATAAGCAGATAGCTATTTAGACGTATACATGTTGAAGTTTCCAAGACCCTCGGTC-ACTGACAGTGATTTCTTCATGAAAATTTTAAGGAGGCTTCACAGTAATAGAAAATAATGTCTGACTTTTACGATTGGCAACA---TTTTTCATGGCATTTTAACTGGAAAGCACAGAGTTACTTCTGAGAAACATAATTGCTTCCAGAAATGTTTAACCCACTAGGAGAATGTTTACATGAAGTGAGCAATAGTCACAAGAAGTGAATAAACCAATT-CTA-----TGCACACAGCAGTGTAAAAAGCCTGGAAGCAGGCATACAGGGATCTGTAAGAGAACCA-ATGCAGGACATGATCATTCTGTTCAATTGTTTTCTTATTGTCAGTAGTCTGGCAACTTCCACCCATTCCCCTTTAACCCAGCAGTT-----------------GATAGCACATGGCTTCCAGAG--CAAATAGTCAACCAGTTCT-CTTTTCCAAATCTTCACATTT-AAGTCTGTCTTCCCCCTGACCATGCCTTTCTTTCTGACATTCCATTATACTTTCTTCACATTGTGTCTCATTTAATTGCTTCCTTTAATCTCTTTTTCTTAAATTTGATCTGCCTTGA---TCTGGAATATTTTCTGATGCACTGAAGTAAAAC--TGGTCATTC----TCCATTTCATAGCTAGT--TA-AAAAGATAAC-TTTGAGTTCCTACAC-ACACTTGGAACTGCTCACCA-TCTCTG s panTro4.chr21 3660806 2474 + 32799110 GAAATATGTTTTCTACTTAGTCTCATAGTATCCTCTTGATTTAATACTATGGAGATAGGTTGAATATCTCA--AAAACATGACTTA--AGAA-GACACCAAGGGTCA----------------CCGGGCAATGTTCCTCC-TACAGAAACAAAGAATTCAATCTTATAGATAACTCAAGAGAAT----------------------------------------------------------------AGAATCTCCTCAT------------GATCATTCCC--TCCCACTTTTC----------------ATTCTGT-TCTTCTTTGCTGCTTTTA--------------------------AACTCCTTTCCATTTCCC----------------------------------CTTTGC-------------------------------------------------------------TTCTTTATATCTCTCTG---------CTCAAATACATACCAGAAACATTGGGACCAAGTCAGAGGTTTGAAGACTGAA-TATTCTTTTCCCTTTGCTCACCACAGGGACTCCACCTATTCATCCTAA-CCAAAATATATGAACAAG-CTGCAACTCACTGCCTACTTTCTATTAGTTCCATTCTCATTTGTTTTAAGGCCTCGGAATATTGCATATGGATAATAACA-TAAAAAGTAATAAGTCCTCTCACAATTCCTTGTGAAATAAAAATCTAGCAA-TGGGGGTGGGGAGGATTGACAGTCTAATCATCTATTATAATAGCAGTATT----T-TGTT---------TTTTGTTTTAAACAAACTGCAGTTTGGA-ATAGCAATCTGTTTTGTTTATCATGTCAAGTTCTTATGAAAGTATTTCAGTTGGATTTCATCCAAAATCTATAACACACCATGTAATACATAATTTTGCTGTCATATGGTTGCAAATTTTGACACTTATTTTGCCAG-AAAATACAGGTATGAATATGAAAGAGGCCCCCCTCAGAGATTTATTGCTTAGTATCCCAGTAGTTCCTCAGTCTTTCTTTGTCGAAGCTCAACCAGC--CAATATTTTACCAAGCAGATTTTGTTGCCCTTTGTTTCTGTTTAGATTTCCTTAAAAATTACCCTTC--AAAAAATCCATAGGCTAA-T-TTTTTTTATTTTTATTGCTAATTGTTCCTAATTCTTC----AACATTAAATGGCATAAACTGTCTT------------GGATA------TTCATAGCT-AAAATAAATGCAGACAA-TTTTACAATTTCCTT-GAATGGTCATGGT-----TGT--------ACAATGAA------------ACTTTTTGTTACTC------------TTTCAATTGCACATAAAAATTACTCTTTTTCTCTTTGGCTATCTACCTCAAAATTCTTTGTTTCAAGTATAC---AAATGAGTCATTAGTGAAAGCAAAATGGGTACTTTTT----ATCTAAGGAAGGTTAAAA--CTTAACTTA-----CTTTAAAATTCAGCATTTTCTGGGTTAAATTAGAACACTACTTCAATATCTGCAATTCAAATAAGTCCTCTGAGAAATTGGCCTCCATAACCAGTGACGTGCTGCTGAACTGAACAGATCTCCAAAATATCCTAACAGATTTCTTTCTTTCATTGTAGAATTGTTTCCATCTGGTGCTTAGATATTAAACCTGGAATATGTAAAGGCTCTCCTCTCTCACCCTGTTTGACTTCCAAATGCTGGCAAATAATTTGCATTGTCAATGAATTGAGGATTAAAATTTTGAACTTAACTGAGTAGCTGCAAGATGCAAA-ATTTAAAGTGATAGATCTTCGAAGTAGTGAATTTTTC--TCTTTTAATTTTGAGAAATGGAGACTTGAAATGTTACTTGTTTGTAGAACATTCTAATTTGAACCTTATTTGCTT-AAAAAGAATAAAAATTTTCTCAATTTTTATCCCAAGTTCAGGATATCGAAACATGAATTTATGAACAGTATTATAGGCCAAATTTT---------TGAGTACTT-----AAATCAGAATATTAGCATCTAA---------------AAATACTTGTATGCATATATTT-CAAGAGATAAGCAGATAGCTATTTAGACGTATACATGTTGAAGTTTCCAAGACCCTCGGTC-ACTGACAGTGATTTCTTCATGAAAATTTTAAGGAGGCTTCACAGTAATAGAAAATAATGTCTGACTTTTACGATTGGCAACA---TTTTTCATGGCATTTTAACTGGAAAGCACAGAGTTACTTCTGAGAAACATAATTGCTTCCAGAAATGTTTAACCCACTAGGAGAATGTTTACATGAAGTGAGCAATAGTCACAAGAAGTGAATAAACCAATT-CTA-----TGCACACAGCAGTGTAAAAAGCCTGGAAGCAGGCATACAGGGATCTGTAAGAAAACCA-ATGCAGGACACGATCATTCTGTTCAATTGTTTTCTTATTGTCAGTAGTCTGGCAACTTCCACCCATTCCCCTTTAACCCAGCAGTT-----------------GATAGCACATGGCTTCCAGAG--CAAATAGTCAACCAGTTCT-CTTTTCCAAATCTTCACATTT-AAGTCTGTCTTCCCCGTGACCATGCCTTTCTTTCTGACATTCCATTATACTTTCTTCACATTGTGTCTCATTTAACTGCTTCCTTTAATCTCTTTTTCTTAAATTTGATCTGCTTTGA---TCTGGAATATTTTCTGATGCACTGAAGTAAAAC--TGGTCATTC----TCCATTTCATAGCTAGT--TA-AAAAGATAAC-TTTGAGTTCCTACAC-ACACTTGGAACTGCTCACCA-TCTCTG i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16910852 2473 + 48394510 GAAATATATTTTATACTTAGTCTCATAGTATCCTCTTGATTTACTACTATGGAGATAGGTTGAATATCTCA--AAAACATGACTTA--AGAA-GACACCAAGGGTCA----------------CCGGGCAATGTTCTTCC-TACAGAAACAAAGAATTCAATCTTATAGGTAACTCAAGAGAAT----------------------------------------------------------------AGAATCTCCTCAT------------GATCATTCCC--TCCCACTTTTT----------------ATTCTGT-TCTTCTTTGCTGCTTTTA--------------------------AACTCCTTTCCACTTCCC----------------------------------CTTTGC-------------------------------------------------------------TTCTTTATATCTCTCTG---------CTCAAATATATACCAGAAATGTTGGGACCAAGTCAGAGGTTTGAAAACTGAA-TATTCTTTTCCCTCTGCTCACCACAGGGACTCCACCTATTC-TCCTAA-CCAAAATATATGAACAAG-CTGCAACTCACTGCCTACTTTCTATTAATTCCATTCTCATTTGTTTTAAGGCCTCGGAATATTGCATATGGATAATAACA-TAAAAAGTAATAAGTCCTCTCACAATTCCTTGTGAAATAAAAATCTAGTAA-TGGGGGTGGGGAGGATTGACAGTCTAATCATCTATTGTAATAGCGGTATT----T-TGTT---------TTTTGTTTTAAACAAACTGCAGTTTGGA-ATAGCAATGTGTTTTGTTTATCATGTCAAGTTCTTATGAAAGTATTTCAGTTGGATTTCATCCAAAATCTATAACTCACCATGTAATGCATAATTTTACTGTCATATGGTTGCAAATTTTGACACTTATTTTGCCAG-AAAATACAGGTATGAATATGAAAGAGGCCCCC-TCAGAGATTTATTGCTTAGTATCCCACTAGTTCCTCAGTCTTTCTTTGCCAAAGCTCAACCAGC--CAGTATTTTACCAAGTAGATTTTGTTGCCCTTTGTTTCTATTTAGTTTTCCTTAAAAATTACCCTTC--AAAAAATCCATAGGCTAA-T-ATTTTTTATTTTTATTGCTAATTGTTCCTAATTCTTC----AACATTAAATGGCATAAACTGTCTT------------GGATA------TTCATAGCT-AAAATAAATGCAGACAA-TTTTACAATTTCCTT-GAATGGTCATGGT-----AGT--------ACAATGAA------------ACTTTTTGTTACTC------------TTTCAATTGCACATAAAAGTTACTCTTTTTCTTTATGGCTATCTACCTCAAAATTCTTTGTTTCAAGTATAC---AAATGAGTCTTTAGTGAAAGCAAAATGGGTACTTTTT----ATCTAAGAAATGTTAAAA--CTTAGGTTA-----CTTTAAAATTCGGCATTTTCTGGGTTAAATTAGAACACTACTTCAATATCTGCAATTCAAATAAGTCCTCTGAGAAATTGGCCTCCATAACCAGTGACGTGCTGCTGAACTGAACAGATCTCCAAAATATCCTAACAGATTTCTTTCTTTCATTGTAGAATTGTTTCCATCTGGTGCTTAGATATTAAACCTGGAATATGTAAAGGCTCTCCTCTCTCACCCTGTTTGACTTCCAAATGCTGGCAAATAATTTGCATTGTCAATGAATTGAGGATTAAAATTTTGAACTTAACTGAGTAGTTGCAAGATGCAAA-ATTTAAAGTGATAGATCTTCGAAGTAGTGAATTTTTCTTTCTTTTAATTTTGAGAAATTGAGACTTGAAATGTTAGTTGTTTGTAGAACATTCTAATTTGAACCTTATTTGCTT-AAAAAGAATAAAAATTTTCTCAATTTTGATCCCAAGTTCAAGATATTGAAACATGAATTTATGAACAGTATTATAGGCCAAATTTT---------TTTGTACTT-----ATATCAGAATGTTAGCATCTAA---------------AAATACTTGTATGCATATATTT-CAAAAGATAAGCAGATAGCTGTTTAGACGTATGCATGTTGAAGTTTCCAAGACCCTCGGTC-ACTGACAGTGATTTCTTCATGAGAATTTTAAGGAGGCTTCACAGTAGTAGAAAATAATGTCTGACTTTTATGACTGGCAACA---TTTTTCATGGCATTTTAACTGGAAAGCACAGAGTTACTTCTGAGAAACATAATTGCTTCCAGAAATGTTTAACCCACTAGGAGAATGTTTACATGAAGTGAGCAATAGTCACAAGAAGTGAATAAACCAATT-CTA-----TGCACACAGCAGTGT-AAAAGCCTGGGAGCACGCATACAGGGATCTGTAAGAGAACCA-ATGCAGGACACAATCATTCTGTTCAATTGTTTTCTTATTGTCAGTAGTCTGGCAACTTCCACCCATTCCCCTTTAACCCAGCAGTG-----------------GATAGCACATGGCTTCCAGAG--CAAATAGTCAACCAGTTCT-CATTTCCAAATCTTCACATTT-AGGTCTGTCTTCCCCCTCACCATTGCTTTCTTTCTGACATTCCATTATACTTTCTTCACATTGTCTCTCATTTAATTGCTTCCTTTAATCTCTTTTTCTTAAATTTGATCTGCTTTGA---TCTGGAATATTTTCTGATGCACTGAAGTAAAAC--TGGTCATTC----TCCATTTCATAGCTAGT--TA-AAAAGATAAC-TTTGAGTTCCTACAT-ACACTTGGAACTGCTCACCA-TCTCTG i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4420629 2474 + 32716333 GAAATATATTTTCTACTTAGTCTTATAGTGTCCTCTTGATTTAATACTATGGAGATAGATTGAATATCTCA--AAAACATGACTTA--AGAA-GACACCAAGGGTCA----------------CCGGGCAATGTTCTTCC-CACAGAAACAAAGAATTCATTCTTATAGATAACTCAAGAGAAT----------------------------------------------------------------AGAATCTCCTCAT------------GATCATTCCC--TCCCACTTTTT----------------ATTCTGT-TCTTCTTTGCTGCTTTTA--------------------------AACTCCTTTCCATTTCCC----------------------------------CTTTGC-------------------------------------------------------------TTCTTTACGTCTCTCTG---------CTCAAATATAAACCAGAAACGGTGGGACCAAGTCAGAGGTTTGAAGACTGAATTATTCTTTTCCCTTTGCTCACCACAGGGACTCCACCTATTC-TCCTAA-ACAAAATATATGAACAAG-CTGCAACTCACTGCCTACTTTCTATTAGTTCCATTCTCATTTGTTTTAAGGCCTCGGAATATTGCATATGGATAACAACA-TAAAAAGTAATAAGTCCTCTCACAATTCCTTGTGAAATAAAAATCTAGCAA-TGGGGGTGGGGAGGATTGACAGTCTAATCATCTATTATAATAGCAGTATT----T-TGTT---------TTTTGTTTTAAACAAACTGCAGTTTGGA-ATAGCAATGTGTTTTGTTTATCATGTCAAGTTCTTATGAAAGTATTTCAGCTGGATTTCATCCAAAATCTATAACTCGCCATGTAATGCATAATTTTGCTGTCATATGGTTGCAAATTTTGACACTTATTTTGCCAG-AAAACACAGGTATGAATATGAAAGAGGCCCCC-TCAGAGATTTATTGCTTAGTATCCCACTAGTTCCTCAGTCTTTCTTTGTCAAAGCTCAATCAGC--CAGTATTTTACCAAGTAGATTTTGTTGCCCTTTGTTTCTGTTTAGATTTCCTTAAAAATTACCCTTC-AAAAAAATCCATAGGCTAA-TATTTTTTTATTTTTATTGCTAATTGTTCCTAATTCTTC----AACATTAAATGACATAAACTGTCTT------------GGATA------TTCATAGCT-AAAATAAATGCAGACAA-TTTTACAATTTCCTT-GAATGGTCATGGT-----TGTA------CACAATGAA------------ACTTTTTATTACTC------------TTTCAATTGCACATAAAAATTACTCTTTTTCTTTATGGCTATCTACCTCAAAATTCTTTGTTTCAAGTATAC---AAATGAGTCATTAGTGAAAGCAAAATGGGTACTTTTT----ATCTAAGAAATGTTAAAA--CTTAAGTTA-----CTTTAAAATTCGGCATTTTCTGGGTTAAATTAGAACACTACTTCAATATCTGCAATTCAAATAAGTCCTCTGAGAAATTGGCCTCCATAACCAGTGACGTGCTGCTGAACTGAACAGATCTCCAAAATATCCTAACAGATTTCTTTCTTTCATTGTAGAATTGTTTCCATCTGGTGCTTAGATATTAAACCTGGAATATGTAAAGGCTCTCCTCTCTCACCCTGTTTGACTTCCAAATGCTGGCAAATAATTTGCATTGTCAATGAATTGAGGATTAAAATTTTGAACTTAACTGAGTAGTTGTAAGATGTGAA-ATTTAAAGTGATAGATCTTCAAAGTAGTGAATTTTTCTTTCTTTTAATTTTGAGAAATGGAGACTTGAAATGTTAGTTGTTTGTAGAACATTCTAATTCGAACCTTATTTGCTT-AAAAAGAATAAAAATTTTCTCAATTTTTATCCCAAGTTCAGGATATCAAAACATGAATTTGTGAACAGTATTATAGGCCAAATTTT---------TTTGTACTT----------AGAATGTTAGCATCTAA---------------AAATACTTGTATGCATATATTT-CAAGAGATAAGCAGATAGCTATTTAGACATATGCATGTTGAAGTTTCCAAGACCCTCGGTC-ACTGACAGTGATTTCTTCAAGAGAATTTTAAGGAGGCTTCACACTAATAGAAAATAATGTCTGACTTTTACGACAGGCAACA---TTTTTCATGGCATTTTAACTGGAAAGCACAGAGTTACTTCTGAGAAACATAATTGCTTCCAGAAATGTTTAACCCACTAGGAGAATGTTTACATGAAGTGAGCAATAGTCACAAGAAGTGAATAAACCAATT-CTC-----TGCACACAGCAGCGT-AAAAGCCTGGGAGCACGCATACAGGGATCTGTAAGAGAACCA-GTGCAGGACACAATCATTCTGTTCAATTGTTTTCTTATTGTCAGTAGTCTGGCAACTGCCACCCATTCCCCTTTAACCCAGCAGTG-----------------GATAGCACATGGCTTCCAGAG--CAAAGAGTCAACCAGTGCTCCATTTCCAAATCTTCACATTT-AGGTCTGTCTTCCCCCTCACCATTCCTTTCTTTCTGACATTCCATTATACTTTCTTCACATTGTCTCTCATTTAATTGTTTCCTTCAATCTCTTTTTCTTAAATTTAATCTGCTTTGA---TCTGGAATATTTTCTGATGCACTGAAGTAAAAC--TGGTCATTC----TCCATTTCGTTCCTAGT--TA-AAAAGATAAC-TTTGAGTTCCTACAC-ACACTTGGAACTGCTCACCA-TCTCTG i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168534513 2467 - 198365852 GAAATATATTTTCTAGTTAGTCTCATAGTATCCTCTTGATTTAATACTGTGGAGATAGGTTGAATATCTCA--AAAACATGACTTA--AGAATGACAGCAAGGGTCA----------------CCAGGCAATGTCTTTTC-CACAGAAACAAAGAATTCAATCTTATAGATAACTCAAGAGAAC----------------------------------------------------------------AGAATCTCCTCAT------------GATCATTCCC--TCCTACTTTTC---------------TGTTCTGT-TCTTCTTTGCTGCTTTTA--------------------------AACTCCTTTCCATTTCCT----------------------------------CTTTGC-------------------------------------------------------------TTCTTTACATCTCTCTG---------CTCAAATATATACCAGAAACATTGGGACCAAGTCAGAGGTTTGAAGACTGAA-AATTCTTTTCCTTTTGCTCACCACAGTGACTCTACCTATTC-TCCTAACCCAGAATATATGAACAAG-CTGCAACTCACTGCCTACTCTCTATTAGTTCCATTCTCCTTTGTTTTAAGGCCTCGGAATATTGCATATGGATAATAACA-TAAAAAGTAATAAGTCCTCTCACAGTTCCTTGTGAAATAAAAATCTAGCAA-GGGGGGTGGGGAGGATTGACAGTCTAATCATCTATTATAATAGCAGTATT----T-TGTT---------TTTTGTTTTAAACAAACTGCAGTTTGGA-ATAGCAATGTGTTTTGTTTATCATGTCAAGTTCTTATGAAAGTATTTCAGTTGGATTTCATCCAAAATCTATAACTCACCATGTAATGCATAATTTTGCTGTCATATGGTTGCAAATTTTGACACTTATTTTGCCAG-AAAATACAGGTATGAATATGAAAGAGGCCCCC-TCAGAGATGTATTGCTTAGTATCCCACTAGTTCCTCAGCCTTTCTTTGTCAAAGCTTACCCAGC--CAGGATTTTACCAAGTAGATTTTGTTGCCCTTTGTTTCTGTTTAGAGTTCCTTAAAAATTGCCCTTC-AAAAAAATCCATAGGCTAA-T-TTTTTTTATTTTTATTGCTAATTCTTCCTAATTCTTC----AACATTAAATGACATACACTGTCTT------------GGATA------TTCATAGCT-AAAATAATTGCAGACAA-TCTTACAATTTCCTT-GAATGGTCATGGT-----TGT--------ACAAAGAA------------ACTTTTTATTACTC------------TTTCAATTGCACATAAAAATTATTCTTTTTCTTTATGGCTATGTACCTCAAAATTCTTTGTTTCAAGTATAC---ACATAAGTCGTTAGTGAAAGCAAAATGGGTACTCTTT----ATCTAAGAAATGTT-AAA--CTTAAGTTA-----CTTTAAAATTCAGCATTTTCTGGGTTAAATTAGAACACTACTTCAATATCTGCAATTCAAATAAGTCCTCTGAGAAATTGGCCTCCATAACCAGTGACGTGCTGCTGAACTGAACAGATCTCCAAAATATCCTAACAGATTTCTTTCTTTCATTGTAGAATTGTTTCCATCTGGTGCTTAGATATTAAACCTGGAATATGTAAAGGCTCTCCTCTCTCACCCTGTTTGACTTCCAAATGCTGGCAAATAATTTGCATTGTCAATGAATTGAGGATTAAAATTTTGAACTTAACTGAGTAGTTGTAAGATGTGAA-ATTTAAAGTGATAGATCTTCAAAGTAGTGAATTTTTCTTTCTTTTAATTTTGAGAAATGGAGACTTGAAATGTTAGCTGTTTGTAGAACAGTCTAATTTGAATCTTATTTGCTT-AAAAAGAATAAA---------AATTTTTAACCCAGGTTCAGGATATCAAAACATGAATTTATGAACAGTATTATAGGCCAAATTTT---------TGAGTACTT-----ATATCAGAATGTTAGCATCTAA---------------AAATACTTGTATGCATATATTT-CAAGAGATAAGCAGATAGCTATTTAGATGTATGCATGTGGAAGTTTCCAAGACCCTCGGTC-ATTGACAGTGATTTCTTCATGAGAATTTTAAGGAGGCTTCACAGTAATATAAATTAATGTCTGACTTTTACGACTAGCAACA---TTTTTCATGGCATCTTAACTGGAAAGCACAGAGTTACTTCTGAGAAACATAATTGCTTCCAGAAATGTTTAACCCACTAGGAGAATGTTTACATGAAGTGAGCAATAGTCACAAGAAATGAATAAACCAATT-CTA-----TACACACGGCAGTGT-AAAAGGCTGGGAGCACGCATACAGGGATCTATAAGAGAATCA-ATGCAGGACACAATCATTCTGTTCAATTATTTTCTTATTGTCAGTAGTCTGGCAACTTCCACCCATTCCCCTTTAACACAGCGGTG-----------------GATAGCACATGGCTTCCAGAG--CAAATAGTCAACCAGTTCT-CGTTTCCAAACCTTCACACTT-AGGTCTGTCTTCCCCCTCACCATTCATTTCTTTCTTACATTCCATTATACTTTCTTCACATTGTCTCTCATTTAATTGCTTCCTTTAATCTCTTTTTCTTAAATTTGATCTGCTTTGA---TCTGGAATATTCTCTGATACGCTGAAGTAAAAC--TGGTCATTC----TCCATTCCATAGCTAGT--TA-AAAAGATAAC-TTAGAGTTCCTACAC-ACACTTGGAACTGCTCACCA-TCTCTG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162197577 2469 - 192294377 GAAATATATTTTCTAGTTAGTCTCATAGTATCCTCTTGATTTAATACTGTGGAGATAGGTTGAATATCTCA--AAAACATGACTTA--AGAATGACAGCAAGGGTCA----------------CCAGGCAATGTCTTTTC-CACAGAAACAAAGAATTCAATCTTATAGATAACTCAAGAGAAC----------------------------------------------------------------AGAATCTCCTCAT------------GATCATTCCC--TCCTACTTTTC---------------TGTTCTGT-TCTTCTTTGCTGCTTTTA--------------------------AACTCCTTTCCATTTCCT----------------------------------CTTTGC-------------------------------------------------------------TTCTTTACATCTCTCTG---------CTCAAATATATACCAGAAACATTGGGACCAAGTCAGAGGTTTGAAGACTGAA-AATTCTTTTCCTTTTGCTCACCACAGTGACTCTACCTATTC-TCCTAACCCAGAATATATGAACAAG-CTGCAACTCACTGCCTACTCTCTATTAGTTCCATTCTCCTTTGTTTTAAGGCCTCGGAATATTGCATATGGATAATAACA-TAAAAAGTAATAAGTCCTCTCACAGTTCCTTGTGAAATAAAAATCTAGCAAGGGGGGGTGGGGAGGATTGACAGTCTAATCATCTATTATAATAGCAGTATT----T-TGTT---------TTTTGTTTTAAACAAACTGCAGTTTGGA-ATAGCAATGTGTTTTGTTTATCATGTCAAGTTCTTATGAAAGTATTTCGGTTGGATTTCATCCAAAATCTATAACTCACCATGTAATGCATAATTTTGCTGTCATATGGTTGCAAATTTTGACACTTATTTTGCCAG-AAAATACAGGTATGAATATGAAAGAGGCTCCC-TCAGAGATGTATTGCTTAGTATCCCACTAGTTCCTCAGCCTTTCTTTGTCAAAGCTTAACCAGC--CAGTATTTTACCAAGTAGATTTTGTTGCCCTTTGTTTCTGTTTAGAGTTCCTTAAAAATTGCCCTTCAAAAAAAATCCATAGGCTAA-T-TTTTTTTATTTTTATTGCTAATTCTTCCTAATTCTTC----AACATTAAATGACATACACTGTCTT------------GGATA------TTCATAGCT-AAAATAAGTGCAGACAA-TCTTACAATTTCCTT-GAATGGTCATGGT-----TGT--------ACAAAGAA------------ACTTTTTACTACTC------------TTTCAATTGCACATAAAAATTATTCTTTTTCTTTATGGCTATGTACCTCAAAATTCTTTGTTTCAAGTATAC---ACATAAGTCGTTAGTGAAAGCAAAATGGGTACTTTTT----ATCTAAGAAATGTT-AAA--CTTAAGTTA-----CTTTAAAATTCAGCATTTTCTGGGTTAAATTAGAACACTACTTCAATATCTGCAATTCAAATAAGTCCTCTGAGAAATTGGCCTCCATAACCAGTGACGTGCTGCTGAACTGAACAGATCTCCAAAATATCCTAACAGATTTCTTTCTTTCATTGTAGAATTGTTTCCATCTGGTGCTTAGATATTAAACCTGGAATATGTAAAGGCTCTCCTCTCTCACCCTGTTTGACTTCCAAATGCTGGCAAATAATTTGCATTGTCAATGAATTGAGGATTAAAATTTTGAACTTAACTGAGTAGTTGTAAGATGTGAA-ATTTAAAGTGATAGATCTTCAAAGTAGTGAATTTTTCTTTCTTTTAATTTTGAGAAATGGAGACTTGAAATGTTAGCTGTTTGTAGAACAGTCTAATTTGAATCTTATTTGCTT-AAAAAGAATAAA---------AATTTTTAACCCAGGTTCAGGATATCAAAACATGAATTTATGAACAGTATTATAGGCCAAATTTT---------TGAGTACTT-----ATATCAGAATGTTAGCATCTAA---------------AAATACTTGTATGCATATATTT-CAAGAGATAAGCAGATAGCTATTTAGATGTATGCATGTGGAAGTTTCCAAGGCCCTCGGTC-ATTGACAGTGATTTCTTCATGAGAATTTTAAGGAGGCTTCACAGTAATATAAATTAATGTCTGACTTTTACGACTAGCAACA---TTTTTCATGGCATCTTAACTGGAAAGCACAGAGTTACTTCTGAGAAACATAATTGCTTCCAGAAATGTTTAACCCACTAGGAGAATGTTTACATGAAGTGAGCAATAGTCACAAGAAATGAATAAACCAATT-CTA-----TGCACACGGCAGTGT-AAAAGGCTGGGAGCACGCATACAGGGATCTATAAGAGAATCA-ATGCAGGACACAATCATTCTGTTCAATTATTTTCTTATTGTCAGTAGTCTGGCAACTTCCACCCATTCCCCTTTAACACAGCGGTG-----------------GATAGCACATGGCTTCCAGAG--CAAATAGTCAACCAGTTCT-CGTTTCCAAACCTTCACACTT-AGGTCTGTCTTCCCCCTCACCATTCATTTCTTTCTTACATTCCATTATACTTTCTTCACATTGTCTCTCATTTAATTGCTTCCTTTAATCTCTTTTTCTTAAATTTGATCTGCTTTGA---TCTGGAATATTCTCTGATACGCTGAAGTAAAAC--TGGTCATTC----TCCATTCCATAGCTAGT--TA-AAAAGATAAC-TTAGAGTTCCTACAC-ACACTTGGAACTGCTCACCA-TCTCTG i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150882691 2475 - 180432695 gaaatatattttctagttaGTCTCATAGTATCCTCTTGATTTAATACTGTGGAGATAGGTGGAATATCTCA--AAAACATGACTTA--AGAATGACAGCAAGGGTCA----------------CCAGGCAATGTCttttc-cacagaaacaaagaatTCAATCTTATAGATAACTCAAGAGAAC----------------------------------------------------------------AGAATCTCCTCAT------------GATCATTCCC--TCCtacttttc---------------tattctgt-tcttctTTGCTGCTTTTA--------------------------AACTCCTTTCCATCTCCT----------------------------------CTTTGC-------------------------------------------------------------TTCTTTACATCTTTCTG---------CTCAAATATATACCAGAAACATTGGGACCAAGTCAGAGGTTTGAAgactgaa-aattcttttccttttgctcACCACAGTGACTCCACCTATTC-TCCTAACCCAGAATATATGAACAAG-CTGCAACTCACTGCCTACTCTCTATTAGTTCCATTCTCCTTTGTTTTAAGGCCTCGGAATATTGCATATGGATAAtaaca-taaaaaggaataagtcCTCTCACAGTTCCTTGTGAAATAAAAATCTAGCAA-GGGGGGTGGGGAGGATTGACAGTCTAATCATCTATTATAAtagcagtatt----t-tgtt---------ttttgttttaaacaaactGCAGTTTGGA-ATAGCAACGTGTTTTGTTTATCATGTCAAGTTCTTATGAAAGTATTTCAGTTGGATTTCATCCAAAATCTA-AACTCACCATGTAATGCATAATTTTGCTGTCATATGGTTGCAAATTTTGACACTTATTTTGCCAG-AAAATACAGGTATGAATATGAAAGAGGCCCCC-TCAGAGATGTATTGCTTAGTATCCCACTAGTTCCTCAGCCTTTCTTTGTCAAAGCTTAACCAGC--CAGTATTTTACCAAGTAGATTTTGTTGCCCTTTGTTTCTGTTTAGAGTTCCTTAAAAATTGCCCTTC-aaaaaaaTCcataggctaatt-tttttttatttttattgctaattcTTCCTAATTCTTC----AACATTAAATGACATACACTGTCTT------------GGATA------TTCATAGCC-AAAATAATTGCAGACAA-TCTTACAATTTCCTT-GAATGGTCATAGT-----TGT--------ACAAAGAA------------ACTTTTTATTACTC------------TTTCAATTGcacataaaaattattctttttctttatggctATGTACCTCAAAATTCTTTGTTTCAAGTATAC---AAATAAGTCATTAGTGAAAGCAAAATGGGTACTTTTT----ATCTAAGAAATGTT-AAA--Ctaaagtta-----ctttaaaattcaGCATTTTCTGGGTTAAATTAGAACACTACTTCAATATCTGCAATTCAAATAAGTCCTCTGAGAAATTGGCCTCCATAACCAGTGACGTGCTGCTGAACTGAACAGATCTCCAAAATATCCtaacagatttctttctttcattgtagAATTGTTTCCATCTGGTGCTTAGATATTAAACCTGGAATATGTAAAGGCTCTCCTCTCTCACCCTGTTTGACTTCCAAATGCTGGCAAATAATTTGCATTGTCAATGAATTGAGGATTAAAATTTTGAACTTAACTGAGTA-TTGTaagatgtgaa-atttaaagtGATAGATCTTCAAAGtagtgaatttttctttcttttaattttgagaaatggAGACTTGAAATGTTAGCTGTTTGTAGAACAGTCTAATTTGAATCTTATTtgctt-aaaaagaataaaaatttactcAATTTTTAACCCAGGTTCAGGATATCAAAACATGAATTTATGAACAGTATTATAGGCCAAATTTT---------TGAGTACTG-----ATATCAGAATGTTAGCATCTAA---------------AAATACTTGTATGCATATATTT-CAAGAGATAAGCAGATAGCTATTTAGATGTATGCATGTGGAAGTTTCCAAGACCCTCGGTC-ATTGACAGTGATTTCTTCATGAGAATTTTAAGGAGGCTTCACAGTAATATAAATTAATGTCTGACTTTTACGACTAGCAACA---TTTTTCATGGCATCTTAACTGGAAAGCACAGAGTTACTTCTGAGAAACATAATTGCTTCCAGAAATGTTTAACCCACTAGGAGAATGTTTACATGAAGTGAGCAATAGTCACAAGAAATGAATAAACCAATT-CTA-----TGCACACGGCAGTGT-AAAAGGCTGGGAGCACGCATACAGGGATCTGTAAGAGAACCA-ATGCAGGACACAATCATTCTgttcaattattttcatattgtCAGTAGTCTGGCAACTTCCACCCATTCCCCTTTAACACAGCGGTG-----------------GATAGCACATGGCTTCCAGAG--CAAATAGTCAACCAGTTCT-CGTTTCCAAACCTTCACACTT-AGGTCTGTCTTCCCCCTCACCATTCGTTTCTTTCTTACATTCCATTATACTTGCTTCACATTGTCTCTCATTTAATTGCTTCctttaatctctttttcttaaatttgatcTGCTTTGA---TCTGGAATATTTTCTGATACACTGAAGTAAAAC--TGGTCATTC----TTCATTCCACAGCTAGT--TA-AAAAGATAAC-TTAGAGTTCCTACAC-ACACTTGGAACTGCTCACCA-TCTCTG i papAnu2.chr3 I 312 C 0 s chlSab2.chr2 14983051 2474 - 90373283 GAAATATATTTTCTAGTTAGTCTCATAGTATCCTCTTGATTTAATACTGTGGAGATAGGTTGAATATCTCA--AAAACATGACTTA--AGAATGACAGCAAGGGTCA----------------CCAGGCAATGTCTTTCC-CACAGAAACAAAGAATTCAATCTTATAGATAACTCAAGAGAAT----------------------------------------------------------------AGAATCTCCTCAT------------GATCATTCCC--TCCTACTTTTC---------------TATTCTGT-TCTTCTTTGCTGCTTTTA--------------------------AACTCCTTTCCATTTCCC----------------------------------CTTTGC-------------------------------------------------------------TTCTTTACATC--TCTG---------CTCAAACATATACCAGAAACATTGGGACCAAGTCAGAGGTTTGAAGACTGAA-TATTCTTTTCCTTTTGCTCGCCACAGTGACTCCACCTATTC-TCCTAACCCAGAATATATGAACAAG-CTACAACTCACTGCCTACTCTCTATTAGTTCCATTTTCATTTGTTTTAAGGCCTCAGAATATTGCGTATGGATAATAACA-TAAAAAGTAATAAGTCCTCTCACAGTCCCTTGTGAAATAAAAATCTAGCAA-GGGGGGTGGGGAGGATTGACAGTCTAATCATCTATTATAATAGCAGTATT----T-TGTT---------TTTTGTTTTAAACAAACTGCAGTTTGGA-ATAGCAATGTGTTTTGTTTATCATGTCAAGTTCTTATGAAAGTATTTCAGTTGGATTTCATCCAAAATCTATAACTCACCATGTAATGCATAATTTTGCTGTCATATGGTTGCAAATTTTGACACTTATTTTGCCAG-AAAATACAGGTATGAATATGAAAGAGGACCCC-TCAGAGATGTATTGCTTAGTATCCCACTAGTTCCTCAGCCTTTCTTTGTCAAAGCTTAACCAGC--CAGTATTTTACCAAGTAGATTTTGTTGCCCTTTGTTTCTGTTTAGAGTTCCTTAAAAATTGCCCTTC-AAAAAAATCCATAGGCTCA-T-TTTTTTTATTTTTATTGCTAATTCTTCCTAATTCTTC----AACATTAAATGACATAAACTGTCTT------------GGATA------TTCATAGCT-AAAATAATTGCAGACAA-TCTTACAATTTCCTT-GAATGGTCATGGT-----TGT--------ACAATGAA------------ACTTTTTATTACTC------------TTTCAATTGCACATAAAAATTATTCTTTTTCTTTATGGCTATGTACCTCAAAATTCTTTGTTTCAAGTATAC---AAATAAGTCATTAGTGAAAGCAATATGGGTACTTTTT----ATCTAAGAAATGTT-AAA--CTAAAGTTA-----CTTTAAAATTCAGCATTTTCTGGGTTAAATTAGAACACTACTTCAATATCTGCAATTCAAATAAGTCCTCTGAGAAATTGGCCTCCATAACCAGTGACGTGCTGCTGAACTGAACAGATCTCCAAAATATCCTAACAGATTTCTTTCTTTCATTGTAGAATTGTTTCCATCTGGTGCTTAGATATTAAACCTGGAATATGTAAAGGCTCTCCTCTCTCACCCTGTTTGACTTCCAAATGCTGGCAAATAATTTGCATTGTCAATGAATTGAGGATTAAAATTTTGAACTTAACTGAGTAGTTGTAAGATGTGAA-ATTTAAAGTGATAGATCTTCAAAGTAGTGAATTTTTCTTTCTTTTAATTTTGAGAAATGGAGACTTGAAATGTTAGCTGTTTGTAGAACAGTCTAATTTGAATCTTATTTGCTT-AAAAAGAATAAAAATTTACTCAATTTTTAACCCAGGTTCAGGATATCAAAACATGAATTTATGAACAGTATTATAGGCCAAATTTT---------TGAGTACTT-----ATATCAGAATGTTAGCATCTAA---------------AAATACTTGTATGCATATATTT-CAAGAGATAAGCAGATAGCTATTTAGATGTATGCATGTGGAAGTTTCCAAGACCCTCGGTC-ATTGACAGTGATTTCTTCATGAGAATTTTAAGGAGGCTTCACAGTAATATAAATTAATGTCTGACTTTTACGACTAGCAACA---TTTTTCATGGCATCTTAACTGGAAAGCACAGAGTTACTTCTGAGAAGCATAATTGCTTCCAGAAATGTTTAACCCACTAGGAGAATGTTTACATGAAGTGAGCAATAGTCACAAGAAATGAATAAACCAATT-CTA-----TGCACACGGCAGTGT-AAAAGGCTGGGAGCACACATACAGGGATCTGTAAGAGAACCA-ATGCAGGACACAATCATTCTGTTCAATTATTTTCTTATTGTCAGTAGTCTGGCAACTTCCACCGATTCCCCTTTAACCCAGCAGTG-----------------GATAGCACATGCGTTCCAGAA--CAAATAGTCAACCAGTTCT-CGTTTCCAAGCCTTCACACTT-AGGTCTGTCTTCCCCCTCACCATTCGTTTCTTTCTTACATTCCATTATACTTTCTTCACATTGTCTCTCATTTAATTGCTTCCTTTAATCTCTTTTTCTTAAATTTGATCTGCTTTGA---TCTGGAATATTTTCTGATACACTGAAGTAAAAC--TGGTCATTC----TCCATTCCATAGCTAGT--TA-AAAAGATAAC-TTAGAGTTCCTACAC-ACACTTGGAACTGCTCACCA-TCTCTG i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21910896 2467 + 50472720 GAAACATATTTTCTAGTTAGTCTCATAGTATCTTCTTGAGTTAATACCATGGAGATAGGTTGAATATCTCAAGAAAACATGACTTA--ACAA-GACAGCAAGGGTCA----------------CTGGGCAATGTCCTTTC-CACAGAAACAAGTAATTCAGTCTTATAGATGACACCAGAGAAT----------------------------------------------------------------AGCATCTCCTCAT------------CATCATTCCC--TCCTCCATTTC---------------TATTCTGT-TCTTCTTTGCTGCTGTTA--------------------------AACTCGTTTCCATTTCCC----------------------------------CTTTCC-------------------------------------------------------------TTCCTTATATCTCTCTG---------CTCAAATATATACCAGAAAGAGTGGGACCAAGTCAGAGGTGTGAAGACTAAG-TATTCCCTTCCCTCTGCTCACCACAGGGACACCACCTATTC-TCCTAACCCAAAATATATGAAGAAG-CTGAAATTCACTGCCTGCTTTTTACTAGTTCCATTCTCATTTACTTTAAGGCCTCAGCATATTGCATATGGATAACAACATTAAAAAGTAATAAGTCCTCTTACAATTCCTTGTAAAATAAAAATCTAGCAA-CGGGGGTGGGGAGGATTGACAGTCTAA----CTACTATAATAGCAGTATT----T-TGTT---------TTTTATTTTAAACAAACTGCAGTTTGGA-ATAGCAATGTGTTTTGTTTATCATGTCAAGTTCTTATGAAAGTATTTGAGTTGGATTTCATCCAAAATCTATAACTCACCATGTAATGCATAATTTTGCTGTCATATGGTTGCAAATTTTGACACTTATTTTGCCAGAAAAATACAGGTATGAATATGAAAGAGGCCCCC-TCTGAGATTTATTGCTTAGTATCCCATTAGTTCCTCAGTCTTTCTTTGTCAAAGCTCAACCAGC--CAGTGTTTTACCAAGCAGATTTTGTTGCCCTTTGTTTCTGTTTAGATTTCCTTAAAAATCATTCTTC---AAAAATCCATAGG-TGA-T-TTTTTTTATTTTTATTGCTAATTATTCCTAATTCTTC----AGCATTAAATAACATAAACTGTCTT------------GGATA------TTCATAGCT-AAAATAAATGCAGACAA-TTTTACAATTTCCTT-AAATGGTCATGGT-----TGT--------ACAATAAA------------ACTTTTAATTACTC------------TTTCAATTGCACGCAAAAATTATTCTTTTTCTTTATGCTTATCTACCTCCAAATTCTTTTTCTCAAGTATAT---AAATGAGTCATTAGAGAAAGAAAAATTGGTACTTTTT--AAATCTAAGAAATATTAAAA--GTTAAGTTA-----CTTTAAAATTCAGCATTTTCTGGGTTAAATTAGAACACTACTTCAATATCTGCAATTCAAATAAGTTCTCTGAGAAATTGGCCACCATAACCAGTGACGTGCTGCTGAACTGAACAGATCTCCAAAATATCCTAACAGATTTCTTTCTTTCACTGTAGAATTGTTTCCATCTGGTGCTTAGATATTAAACCTGGAATATGTAAAGGCTCTCCTCTCTCACCCTGTTTGACTTCCAAATGCTGGCAAATAATTTGCATTGTCAATGAATTGAGGATTAAAATTTTGAACTTAACTGAGTAGTTGTAACATGCAAA-ATTTAAAGTGATAGATCTTCAAAGTAGTGAATTTTTCTTTCTTTTAATTTTGAGAAATGGAGACTTGAAATGTTAGTTGTTTGTAGAATGCTCTAATTCAAACCTTATTTGCTT-AAAAAGAATAAGACTTTTCTCAATTTTTATCCCAAGGTCAGGATATTGAAACATGAAATTATGAAAAGTATTATAGGCCAAA-TTT---------TGAGTACTT-----ATATCAGAACATTAGCATCTAA---------------AAATACTTATATGAATATATTC-CTGGAGATAAGCAGATAGCTAATCAGACATATGCTTGTAGAAGTTTCCAAGACTCTCAGTC-ATTGACAGTGATTTCTTCATGAGAATTTTAAGGAGACTTCACAATAATAGAAAATAATATCTGACTTTTATGACTGGTGACA---TTTTTCATGGCATCTTAACTGGAAAGCACAGAGTTACTTCTGAGAAACATAATTGCTTCCAGAAATGTTTAACCCACTAAGGGAATATTTACACAAAGTGAGCAGTAGTCTCAAGAAGTGAATAAACCAATT-CTG-----TGCACATTGCAGTGT-AAAAGCCTGGAAGCAGGCATACAGGGATCCATAAAAGAACCA-ATGCAAGGCACAATCATTCTGTTCAATCAATTTCTTATTGTCAGTAGTCTGGCAATTTTCACCCATTCCCCTTTAACACAGCAGTG-----------------GATAGCACATGGCTTCCAGAG--CAAACAGTCAACCATTTCT-CATTTCCAAATCTTCACACTT-AGGTCTGACTTTCTCCTCACCATTACTTTCTTTCTGACATGCCATTATACTTTCTTCACATTGTCTTTCATTTGATTGCTTCCTTTAATCTCTTTTTCCTAAATTTGATCTGCTTTGA---TCTGAACTATTTTCTGATGTACTGAAGTAAAAC--TGGTCATTC----TCCATTTCATAGCTAGT-----------TAAT-TTTGATTTCCTACATAATACATGGAACGGATCACCA-TCTCTG i calJac3.chr21 C 0 C 0 s mm10.chr16 78097754 2703 + 98207768 GAAATATATTTGC-AGTTGCCCTCAGACCATAA-CTTAATTTAATGATATAGAAGCACATTAGTGATTTTA--AAGACTTAATGCC--TGA--GATGACAAGTATCCCGACATCTTCCTTCCTCCCAGTAATGTCCCTCCTCCCAGGAACCCAGAACTCCGCCTTATCAATGACTTACAAGTATCATTCTCTCTGTTTTTTGCTCTTTCTTGTTTCTCTTTGCTGCTTTTTAAAAAAAtttttattggatattttctttatttacatttcaaaagtcatcccctttcctggtttcccttccggaaatgccctattccatcccctccctgctgcttctatgagggtgctcacccacccaaccacccactccctcccacctccctgccctggcattcccctacactggggcatcaagtcttcacaggaccaagggtctctcctcccattgatggtctacaaggccatcctcCAATCCCCCTGGCTTTCCTTCTATTTTTCTG---------CTGAAATATACAAGACAAAGGATGGGACCAACTCAGGGATTTGGACAATGAA-CAAT-TGTTCCTTTTGTTT-CCTCTGAGA----ATTTATTT-TCTCAGCCCCAAATACGTGAACAAG-ACACAAATC-CTTCCTGTTTTCTATTAGAGCCATCCTCATTTATTTCAATCTCTCCACAGACTGTATAGACAGGAGAACA--AATGGCTAATACATTCTCTCACAATTTC-TGTGTTTGAAACATTCAGCAG-TGGGAGAGAGGAAGGTGGACAGCCTGACAGTCTCTCTTAATAATAGTATTACTGT-TGTTTTCCTTTCATTTTATCTTTGAGACACTGAAGCCTGGACATGTTAGTGT-TTTTGTTTATCACGTCAAGTTCTTACCAAAGCATCCGAGCTGGAGTTCATCCAACATCTCTAACTCACCATGTAATGCATAATTTTTCTGTCAGACAGTTGCAAATTTTGACACTTACTTTGCCAG-AAAACACAGGTATGGATATGAAAGCGCCCCCC-TCTGAGATTTACAGCTTCGTCTCTCACTGGTTCCCCAGTTATCTATTGTCAAAACCCTGCCACCTTCCGCATATTCCCAAGCAAATTTCATTACCCTTTGTTTCTGTTCAAATTTGCTTGAAATCGCCCATTG-AAAAGCTTCCATGG--TGA-G-CTTGTTTA-----ATTGTTAATTTATTCTAATCTGTCAAAAAAAATGAAATGCCATAAACTGCCCCCACCCCGACAAAGGAGT------TTCACAACA-AACACACCTGCCAATAA-TCGTACAGTTCTCTT-AAATTGGAATCGTAGACGTGA--------ACAGTAGATATTAAGACCATAATTTTTCTCATTT------------ATCCAACTTGATCTACACAGCACTACTTCTCTTTATACTTGCCTGACTTGATGTTCTTTGTTTCAGGTATATAAAAAACGAGTTACTCACAAAGACAAAAGGTGAATTTTTTTAAAACTAAGGAAATATTAAAATTCTTAATTCAGATATATCTGAAATTCAGCATATCCTGAGTT-AATTCGTGCACTACTTGAGTATCTGCAATTCAAATAAGTCATCGGAGAAATTGGCC-CCATAACCAGTGACGGGCTGCTTAACTGAACAGCTCTCCAAACTATCCTAACAGATTTCTTTCTTTCTTTGTAGAATTATTTCCATCTGGTGCTTCAATATTAAACCTGGAATATGGAAAGGCTCTCCCCTCTCACCCTATTTGACTTCGAAATCCTGGCAAAGAATTTGCATGGTCAATGAATTGAGCGTTAAAATGTTGAACTTAACTGTGTAGTTGTAAGATGAAACTTTTTAAAGCAGTAAATATCTAAAGAAGTGAGTTTCTTT------------------ATGGACTTCTGAAAGCCTCGTTATATACAGAAGATCC---TTGAAACCTGTTGTGTTTGAAAAAGAATAAAATTTTTCTCGATTTTT-CCCCAGGTTATGGATACTGAAACA--AATTTCTGGCGAGTGTCCTAAGCCA---TAC---------TGAACATTTTAAAGATGTTCAAATTTGAGCATCCAAAACTTTGAGGAGCTGAAATATCTGTACACAGACGTTTATATAATAGAAGTAAATGGCTGTTTGCAGGCATCCAAGT--------------------GAC-ACTAATAGTAATTTCTTCCTAAGAAATTAAAGG-----TCACAGTA---------AATTTCTAACTTTTAAGCATGGCAACATTTTTTTTTATAGCATCTTGACTGGAAAGCACAGAGTTACTTCTAAGAAACATAATTGCTTCCAGAAATTTCTAAACCACTAAGAGAATGTTTATATGAAGTAAGCAATAGTCACAAGGACTGAATAAGCCCATTCCTA-----CACACATGGCAGCCC----AGCCCAG--GCACGCATA---AGAACTGCAGGAGACCCATGTGCAGTACAC-ATCACTATGGTCAGCTTCTTCCTGCTTG-CATTACTCTTGCCACCTGCCACCATTCCTCTACCATGCAACACTG-----------------GAGAGCAGAGGCCTTCAATAGCTCAATGAGT---CCGGTTCA-CTCTCCCAAGTCTTCACCCTG-GCATCTGTCCTCCC----AGCCTTCCTTTCATTCCGAAGTCTCA-CATCCTTTCTTCACATTGTCTCTTACTCAATTGCTTCCTTTTATCTC---TTACGGATGCTGATCTTCCTTGATCTTCTGGAATAG--TCTGATGCTATGAAGCAAAACAATACACATTC----TGTACTTCATAGCTGATGATA-AAAAAAGGAT-GCTGAGTTGCTACACAAAACTTGGGACTATTCCTCA-TCTCTG i mm10.chr16 C 0 I 798 s canFam3.chr31 13795133 2461 + 39895921 GAAATCTGTTCTCCTGTTAGTCTCAGATAATTCCCTAAATTTAATACTATGAAGCTAGGTTAAC--TCTCA--AAAACATGACACATTGGAA-GAC------GAACA----------------CTGAATAATGTCCTTTA-CCTAGAAACCAACAACTCAACACTATAGATGATTCAAGAGAAT---------------------------------------------------------------AAGAGTTGCTTCAC------------CATTATTCCC--TCATATATTTC---------------TCTTATGT-TCCTCTTTGCTGTTTTTA--------------------------AATTCCTTTACATTTCCC----------------------------------CTTGCC-------------------------------------------------------------TTATTTCCATCTCTCTGGTCAAAAAATTCAAATATACAGCAGAGAGAGTAGGACCAAATT----------CAATTGAA-TATTCTATCCCCTTTGCTCCTTACAAAGACCCTCCCTTTTG-TCCCCATACAAAGTATATGGAAAAGTTTTTCACTTACTGCCTATTTTCCATTACTTCAGTCCTCATGTATTTTAAGCTCTTGGTTTTTTGTATATAGAT----ACA--------------GTACTCTCACAATTTTTCATAAAATAAAAATCTAGCAA-TGGGGGTGAAAAGCATTGATATTCTGATCATCtattataatagtaatatt----tgtttt---------ttttattttaaaCAAGCTACAGTTTGGA-AAAGCAATGTGTTTTGTTTATCATGTCAAGTTCTTATGAAAGTATTTGAGTTGGATTTCATCCAAAATCTATAATTCACCATGTAATGCATAATTTTGCTGTCATATGGCTGCAAATTTTTACACTTATTTTGCCAG-AAAACACAGGTATGAATATGAAGGAGGCCCCC-TCAGAGATTTATTGCTTAATATCCCACTAGTTCCCTAGTC-------GTCAAAGCTCAACCATC--CATTAT-TTACCAAGTAGATTTTTCTGCCCTTTGTTTCAGCTCAGATTCACTTAAAAATCTCCCTTT--GAAAGATCCATAGGCTAT-T----------TGTAATTGTTAATTGTTTTGAGTCCTTC----AATATTAAATCCCATAAACTGTTCT------------GGATGAAGATTTTCATAGCAGAAAACAAACATAGATGATTTTTATAATTCCCTTAAAATGGCCAGAGC-----TGTAGCTATTAACAGTAAA------------ACtttttattattctaattttattattattaaGTACA-ATAAAAATCACTCCTTCTCTTCCTGCTTATCTGCCTCAAAATTCTTTGTTTCAGGTATAC---AA--GAGTCATTACTGAAAGAAATACAGGTACTGTTC--TGACCTAAAAACTATTAAAA--TTTAAATAA-----ATCCAAAATTCAGCATTTTCTGGGTTAAATTAGTGCACTACTTCAGTATCTGCAATTCAAATAAGTCCTCTGAGAAATTGGCCTCCATAACCAGTGACGTGCTGCTGAACTGAACAGATCTCCAAAATATCCTAACAGATTTCTTTCTTTCATTGTAGAATTGTTTCCATCTGGTGCTTAGATATTAAACCTGGAATATGTAAAGGCTCTCCCCTCTCACCCTGTTTGACTTCCAAATGCTGGCAAATAATTTGCATTGTCAATGAATTGAGGATTAAAATTTTGAACTTAACTGTGTAGTTGTAAAATGTACA-ATTTAAAGCGATAGATCTTTGAAGTAGTGGGGTTTTTTTTC------TTTTGAGAAATGGAGATTTGAAGTGTTTGTTGTTTGCAGAATATTCTAACTCAAACTTACTTTGCTT-GAAAAAAATAAAACTTTTCTTAATTTTCTTCCGAAGTTCAGAATGTTGAAATATGAATTTATGAAGAGCACTATAGGCCAGTTTTTGTAAGTATGTATATATTT-----ATAACCAAATAGGAACATCTAA---------------AAACAC--------ATATATTT-CTTTGTATAGATAGGCAGATATTTAGATGTATACATGTACAAATTTCCAAGATCCTGGGTCTATAGACAATAATTTCTTCATGAGAATTTTAAAGAT-CCTCACAGTAATAA-----AATGTCTGACTTTTAAGACTGGCAACA----TTTTCATAGCATCTTAATTGGAAAGCACAGAGTTACTTCTAAGAAACATAATTGCTTCCAGAAATGTTTAAACCACTAGG-GAATGTTTATATGAAATGAGCAATAGTCAC-AGGAGTGAATAAACCAGTT-CTATGTACTGCATGTTGTAGTGT-AAAAGCCTAGGAGTGC----ACAAAGAGTTATAAGAGAACCATGTGCAAGACACAATCATTTTGTTCAATC----TCTTCTTGTCATTAGTCT-GCAACTTCTACCTATCCCTCTTCAAC-TAATAGTGGATCTCATGTCTTATGAGATAAGACATGGATAACAAAG--CA--CAGTTATCCAGTTCT-CTTGTCCAAAACTTCACACTTCATGCCTGTCCTCCCT----CCACTGTTTTCTTTTTGATGCCCCATCATACTTTCTTCACATTGTCTCTTATTTAATTGCTTCCTTTAATCTCTTTCCCTTAAATTTGATCTGCCTTGATCTCCTGGAATATTTTCTGATGCATT------------TCTCCATTTCACGTCCATTTCATGACTAGT--TACAAAAAATAATAACTGAATTCCTACCCTGCACATGAAACTATTTACCATTTTCTG i canFam3.chr31 C 0 C 0 a score=59062.000000 s hg38.chr21_KI270874v1_alt 50410 17 + 166743 ----CCAGTGTGCTCACATTT s panTro4.chr21 3663280 17 + 32799110 ----CCGGTGTGCTCACATTT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16913325 17 + 48394510 ----CCGGTGTGCTCACATTT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4423103 17 + 32716333 ----CCAGTGTGCTCACATTT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168536980 17 - 198365852 ----CTGGTGTGCTCACATTT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162200046 17 - 192294377 ----CTGGTGTGCTCACATTT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150885166 17 - 180432695 ----CTGGTGTGCTCACAttt i papAnu2.chr3 C 0 M 294 s chlSab2.chr2 14985525 17 - 90373283 ----CTGGTGTGCTCACATTT i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21913363 17 + 50472720 ----CCAGTGTACTCACATTT i calJac3.chr21 C 0 C 0 s canFam3.chr31 13797594 21 + 39895921 TTCACTGTGCTGCTCACATTT i canFam3.chr31 C 0 C 0 e mm10.chr16 78100457 798 + 98207768 I a score=3276.000000 s hg38.chr21_KI270874v1_alt 50427 1 + 166743 A s panTro4.chr21 3663297 1 + 32799110 A i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16913342 1 + 48394510 A i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4423120 1 + 32716333 A i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168536997 1 - 198365852 A i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162200063 1 - 192294377 A i macFas5.chr3 C 0 C 0 s chlSab2.chr2 14985542 1 - 90373283 A i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21913380 1 + 50472720 A i calJac3.chr21 C 0 C 0 s canFam3.chr31 13797615 1 + 39895921 A i canFam3.chr31 C 0 I 717 e mm10.chr16 78100457 798 + 98207768 I e papAnu2.chr3 150885183 294 - 180432695 M a score=-596.000000 s hg38.chr21_KI270874v1_alt 50428 5 + 166743 CTT--AA s panTro4.chr21 3663298 4 + 32799110 CTT---A i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16913343 5 + 48394510 CTT--AA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4423121 7 + 32716333 CTTAAAA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168536998 6 - 198365852 CTTT-AA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162200064 7 - 192294377 CTTTAAA i macFas5.chr3 C 0 C 0 s chlSab2.chr2 14985543 6 - 90373283 CTTT-AA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21913381 4 + 50472720 CTT---A i calJac3.chr21 C 0 C 0 e canFam3.chr31 13797616 717 + 39895921 I e mm10.chr16 78100457 798 + 98207768 I e papAnu2.chr3 150885183 294 - 180432695 M a score=112439.000000 s hg38.chr21_KI270874v1_alt 50433 53 + 166743 AAAAAAAAAAGTCTAAGAAGACTTACGGCAAA-------GCATTACCTTGAGAAGGACAG s panTro4.chr21 3663302 53 + 32799110 AAAAAAAAAAGTCTAAGAAGACTTACGGCAAA-------ACATTACCTTGAGAAGGACAG i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16913348 53 + 48394510 AAAAAAAAAAGTCAAAGAAGACTTACAGCAAA-------ACATTACCTTGGGAAGGACAG i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4423128 53 + 32716333 AAAAAAAAAAGTCTAAGAAGACTTACAACAAA-------ACATTACCTTGAGAAGGACAG i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168537004 60 - 198365852 AAAAAAAAAAGTCTAAGAAGGCTTACAGGAAAGGGATTGACATTACCTTGAGAAGGACAG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162200071 60 - 192294377 AAAAAAAAAAGTCTAAGAAGGCTTACAGGAAAGGGATCGACATTACCTTGAGAAGGACAG i macFas5.chr3 C 0 C 0 s chlSab2.chr2 14985549 60 - 90373283 AAAAAAAAAAGTCTAAGAAGACTTACAGGAAAGGGATCAACATTACCTTGAGAAGGACAG i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21913385 57 + 50472720 AAAAAAAAAAGTTTAAGAAGACTTGCAGGAAAGGGATTGACATGACCTTG---AGGACAG i calJac3.chr21 C 0 C 0 s canFam3.chr31 13798333 48 + 39895921 AAAAAAAAAAACATAAATTGATCTACTT-----------AATTTCTATTCAAAAGAAAA- i canFam3.chr31 I 717 C 0 e mm10.chr16 78100457 798 + 98207768 I e papAnu2.chr3 150885183 294 - 180432695 M a score=1872.000000 s hg38.chr21_KI270874v1_alt 50486 2 + 166743 --TT s panTro4.chr21 3663355 2 + 32799110 --TT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16913401 2 + 48394510 --TT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4423181 2 + 32716333 --TT i nomLeu3.chr25 C 0 I 762 s rheMac3.chr3 168537064 2 - 198365852 --TT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162200131 2 - 192294377 --TT i macFas5.chr3 C 0 C 0 s chlSab2.chr2 14985609 2 - 90373283 --TT i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21913442 2 + 50472720 --TT i calJac3.chr21 C 0 C 0 s mm10.chr16 78101255 2 + 98207768 --TT i mm10.chr16 I 798 C 0 s canFam3.chr31 13798381 2 + 39895921 AA-- i canFam3.chr31 C 0 C 0 e papAnu2.chr3 150885183 294 - 180432695 M a score=1169164.000000 s hg38.chr21_KI270874v1_alt 50488 452 + 166743 AAGAATGTTTTGCTGATAGGCATATAATCA-------CTTGACTGATTTT-CACAAACATTTGTGGGAATCTGT-TAAAGTATCTTAGTCCAGTTCGGTC-TCAGCAGGACCCAACATCTTGACCCAAAGGCCTCCAAACAA-AAAGAT--------TCATT-----------AAA--------------------------------------GT-G-GTGAAAATTTTCCATAAAACTTTAAGACATCAAAGAACTAATTTCTGTAGTTCCCTGCCATGC-AAAATATTACAGTATAAGTTTAGAGCTAATATTGGAACTAGAATAATCTAGAACAGATAGATATTCTCAAAATATTGTACATACTTTAAACTAAAATCTA---AAAAAGATCCAAAAACAC----------------------CCGTTGCAGTTTGCAAC--ATGAGTCTTACAG-AAAATTACAATGTGTACTTCTAGCTAAAAGGAGCAAAC---AAACAAAAATCAACGC---T---AAGTGAATGATGTAACTGTTTTGTATCTTT--TCATCCA s panTro4.chr21 3663357 452 + 32799110 AAGAATGTTTTGCTGATAGGCATATAATCA-------CTTGACTGATTTT-CACAAACATTTGTGGGAATCTTT-TAAAGTATCTTAGTCCAGTTCGGTC-TCAGCAGGACCCAACATCTTGACCCAAAGGCCTCCAAACAA-AAAGAT--------TCATT-----------AAA--------------------------------------GT-G-GTGAAAATTTTCCATAAAACTTTAAGACGTCAAAGAACTAATTTCAGTATTTCCCTGCCATGC-AAAATATTACAGTATAAGTTTAGAGCTAATATTGGAACTAGAATAATCTAGAACAGATAGATATTCTCAAAATATTGTACATACTTTAAACTAAAATCTA---AAAAAGATCCAAAAACAC----------------------CCGTTGCAGTTTGCAAC--ATGAGTCTTACAG-AAAATTACAATGTGTACTTCTAGCTAAAAGGAGCAAAC---AAACAAAAATCAACGC---T---AAGTGAATGATGTAACTGTTTTGTATCTTT--TCATCCA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16913403 448 + 48394510 AAGAATGTTTTGCTGATAGGCATATAATCA-------CTTGGCTGATTCT-CACAAACATTTGTGGGAATCTTT-TAAAGTATCTTAGTCCAGTTTGGTC-TCAGCAGGACCCAACATCTTGACCCAAAGGCCTCCAAACAA-AAAGAT--------TCATT-----------AAA--------------------------------------GT-G-GCAAAAATTTTCCATAAAACTTTAAGATGTCAAAGAATTAATTTCTGTAGTTCCCTGCCAAGC-AAAATATTACAGTATAAGTTTAGAGCTAATATTGGAACTAGAATAATCTAGAACAGATAGATATTCTCAAAATATTGTACATACTTTAAACTAAAATCTA---AAAAAGATCCAAAAACAC----------------------CCATTGCAGTTTGCAAC--ATGAGTCTTACAG-AAAATTACAATGTGTACTTCTAGCTAAAAGAAG----C---AAACAAAAATCAATGC---T---AAGTAAATGATGTAACTGTTTTGTATCTTT--TCATCCA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4423945 448 + 32716333 AAGAATGTTTTGCTGATAGGCATATAATCA-------CTTGACTGATTCT-CACAAACATTTGTGGGAATCTTT-TAAAGTATCTTAGTCCAGTTCGGTC-TCAGCAGGACCCAACATCTTGACCCAAAGGCCTCCAAACAA-AAAGAT--------TCATT-----------AAA--------------------------------------GT-G-GTGAAAATTTTCCATAAAACTTTAAGACATCAAAGAATTAATTTCTGTAGTTCCCTGCCATGC-AAAATATTACAGTGTAAGTTTAGAGCTAATATTGGAACTAGAATAATCTAGAACAGATAGATATTCTCAAAATATTGTACATACTTTAAACTAAAATATA---AGAAAGATCCAAAAACAC----------------------CCATTGCAGTTTGCAAC--ATGAGTCTTACAG-AAAATTACAATGTGTACTTCTAGCTAAAAGGAG----C---AAACAAAAATCAATGC---T---AAGTGAATGATGTAACTGTTTTGTATCTTT--TCATCCA i nomLeu3.chr25 I 762 C 0 s rheMac3.chr3 168537066 490 - 198365852 AAGAATGTTTTGCTGATAGGCATATAATCA-------CTTGACTGATTCT-CACAAACATTTGTGGGAATCTTT-TGAAGTATCTTAGTCCAGTTCGGTC-TCAGCAGGACCCAACATCTTGACCCAAAGGCCTCCAAACAA-AAAGAC-----TTTTTTTTTTTTTTGGTG-AAAAAAAAATGTGAAAATTTTTTTCACATTCAAAAAAAAATGT-G-GTGAAAATTTTCCATAAAACTGTAAGGCGTCAAAGAATGAATTTCTGTAGTTCCCTGTCATGC-AAAATATTACAGTATAAGTTTAGAGCTAATATTGGAACTAGACTAATCTAGAAC----AGATATTCTCAAAATATTGTACA-----TAAACTAAAATCTA-----AAAGATCCAAAAACAC----------------------CCTTTGCAGTTTGCAAC--ATGAGTCTTACAG-AAAATTATAATGTGTACATCTAGCTAAAAGGAGCAAAC---AAAAAAAAATCAATGC---T---AAGTGAATGATGTAACTGTTTTGTGTCTTT--TCA--CA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162200133 495 - 192294377 AAGAATGTTTTGCTGATAGGCATATAATCA-------CTTGACTGATTCT-CACAAACATTTGTGGGAATCTTT-TGAAGTATCTTAGTCCAGTTCGGTC-TCAGCAGGACCCAACATCTTGACCCAAAGGCCTCCAAACAA-AAAGACtttttttttttttttttttGGTG-AAAAAAAAATGTGAAAATTTTTTTCACATTCAAAAAAAAATGT-G-GTGAAAATTTTCCATAAAACTGTAAGGCGTCAAAGAATGAATTTCTGTAGTTCCCTGTCATGC-AAAATATTACAGTATAAGTTTAGAGCTAATATTGGAACTAGACTAATCTAGAAC----AGATATTCTCAAAATATTGTACA-----TAAACTAAAATCTA-----AAAGATCCAAAAACAC----------------------CCTTTGCAGTTTGCAAC--ATGAGTCTTACAG-AAAATTACAATGTGTACATCTAGCTAAAAGGAGCAAAC---AAAAAAAAATCAATGC---T---AAGTGAATGATGTAACTGTTTTGTGTCTTT--TCA--CA i macFas5.chr3 C 0 C 0 s chlSab2.chr2 14985611 494 - 90373283 AAGAATGTTTTGCTGATAGGCATATAATCA-------CTTGACTGATTCT-CACAAACATTTGTGGGAATCTTT-TGAAGTATCTTAGTCCAGTTCGGTC-TCAGCAGGACCCCACATCTTGACCCAAAGGCCTCCAAACAA-AAAGAC--------TCTTTTTTTTTGGTGAAAAAAAAAATGTGAAAATTTTTTTCACATTCAAAAAAAAATGT-G-GTGAAAATTTTCCATAAAACTGTAAGGCATCAAAGAATGAATTTCTGTAGTTCCCTGCCATGC-AAAATATTACAGTATAAGTTTAGAGCTAATATTGGAACTAGACTAATCTAGAAC----AGATATTCTCAAAATGTTGTACATATTTTAAACTAAAATCTA-----AAAGATCCAAAAACAC----------------------CC-TTGCAGTTTGCAAC--ATGAGTCTTACAG-AAAATTACAATGTGTACATCTAGCTAAAAGGAGCAAACAAAAAAAAAAAATCAA-GC---T---AAGTGAATGATGTAACTGTTTTGTGTCTTT--TCA--CA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21913444 448 + 50472720 AAGAATGTTTTGCTGATACGCATATAATCA-------CTTGCCTGATTCT-TACAAACATTTGTAGGGAACTTT-TAAAGTATCTTAGTCCAGTTCAGTC-TCAGCAGGACCCAACATCTTGACCCAAAAGCCTCCAAACAAGAAACAT--------TCATT-----------AAA--------------------------------------GT-G-GTAAATATTTTCCATAAAACTTTAAGACGTCAAAGAACAAATTTCTGTAGTTCTTTGCCATGC-AAAATATTACAGTATAAGTTTAGAGCTAATATTGGAACTAGATTAAGGTAGAACAGATAGATAATCTCAAACTATTGTACATACTT-----TAAAATCTA---AAAAGGATCCAAGAATAC----------------------CCATTGCAGTTTGCAAC--ATGAGTCTTACAG-AAAATTACCATGTGTGCTTCTAGCTAAAAGCAGCAAAC---AAACAAAAATCTATGC---T---AAGTGAATAATGTAACTGTTTTGTACCTTT--TCATGCA i calJac3.chr21 C 0 C 0 s mm10.chr16 78101257 420 + 98207768 AAAAAATATTTACTGATA-GCAGA-AATCACAGTGTCCATGAATCCTGGT-CAGAAATGCCCGAGGAAGTCTGT---AAACCTCTCAGAACAGTT-----------AGAACTCAAC-TCAAGCTCCAAACGTCTCCAAACACGAAAGCT--------CTAAT-----------AAA--------------------------------------ATAA-GTGAGAATCTTCCATAAAACTTTAAGATGCCAAAGAACAGATTTTTATCATTCCCCACCACGC-AAAATGTCACTGTCCAGAATCAGAGCTAGGA--------------------------------------------TGTAAAGGCTTTCGTCTGAAATTTAAGAAAAAAAAAAAAAAAACACACACACACACACACAATAATGACCATTGCAGTGTACAG------------AAAA-AAAATCACAATGTGTGCTTCTGGCTCAGAGCAGCAAAC---AA--AAAGGTCTATGT---TGAGGAGTGATTGATGTAGCTGGTTTGTATCTTTAATACTCCA i mm10.chr16 C 0 C 0 s canFam3.chr31 13798383 440 + 39895921 AAGAATGTTTTGCTGACAAGTATATAACCA-------CTTGACTGATTCTAAACAAACATTTGTGGGAATCTTTTTAAAGCAATTTTTTTCACCTGGATCTTCAGTTGGACCAAGCATCTGAACCCAAAAACCTCCAAACAA-AAAGAT--------T---------------AAA--------------------------------------AT-GCGTGAGAATTTTCCAAAAAACTTCAAGATG-AAAACTTCAAACTTCTATACTTGCCTGCCATGCAAAAATATTGTAGTGCAAATTTAGGGCTAATA---GAACCCATCT--TCTAGGAC----AGACTTTCTAAAAATATTGTATATGCTT-----TAAAATCTG---AGCAATACCCAA-AATAT----------------------TCATTGCAGTTGGCAACATATGAGCATTATAGAAAAATCACAATGTGTTCTTCTGGCTACACACAACAAAC---ACA-AAATATCTATGCAAAT---AAGGAACTGATGTAATGGTTTTGTGTCT----TCATCTA i canFam3.chr31 C 0 C 0 e papAnu2.chr3 150885183 294 - 180432695 M a score=53289.000000 s hg38.chr21_KI270874v1_alt 50940 21 + 166743 CTCAAaaagaagaaagaaaga s panTro4.chr21 3663809 21 + 32799110 CTCAAAAAGAAgaaagaaaga i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16913851 21 + 48394510 CTCAAaaagaagaaagaaaga i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4424393 21 + 32716333 CTCAAaaagaagaaagagaga i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168537556 21 - 198365852 CTCAAAAAGCAGAAAGCagaa i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162200628 21 - 192294377 CTCAAAAAGCagaaagaaaga i macFas5.chr3 C 0 C 0 s chlSab2.chr2 14986105 21 - 90373283 CTCAAaaagaagaaagaaaga i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21913892 21 + 50472720 GTCAAACAGTAGAAAGAAATA i calJac3.chr21 C 0 C 0 s canFam3.chr31 13798823 21 + 39895921 TTCAGATAGCAGAAAGAAAGA i canFam3.chr31 C 0 C 0 e mm10.chr16 78101677 0 + 98207768 C e papAnu2.chr3 150885183 294 - 180432695 M a score=1694.000000 s hg38.chr21_KI270874v1_alt 50961 1 + 166743 a s panTro4.chr21 3663830 1 + 32799110 a i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16913872 1 + 48394510 a i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4424414 1 + 32716333 g i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168537577 1 - 198365852 a i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162200649 1 - 192294377 a i macFas5.chr3 C 0 C 0 s chlSab2.chr2 14986126 1 - 90373283 a i chlSab2.chr2 C 0 I 158 s canFam3.chr31 13798844 1 + 39895921 A i canFam3.chr31 C 0 C 0 e calJac3.chr21 21913913 0 + 50472720 C e mm10.chr16 78101677 0 + 98207768 C e papAnu2.chr3 150885183 294 - 180432695 M a score=8902.000000 s hg38.chr21_KI270874v1_alt 50962 9 + 166743 gaaagagag s panTro4.chr21 3663831 9 + 32799110 gaaagagag i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16913873 8 + 48394510 -agagagag i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4424415 8 + 32716333 -agaggaag i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168537578 9 - 198365852 gaaagaaag i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162200650 9 - 192294377 gaaagaaag i macFas5.chr3 C 0 C 0 e calJac3.chr21 21913913 0 + 50472720 C e canFam3.chr31 13798845 0 + 39895921 C e mm10.chr16 78101677 0 + 98207768 C e chlSab2.chr2 14986127 158 - 90373283 I e papAnu2.chr3 150885183 294 - 180432695 M a score=5885.000000 s hg38.chr21_KI270874v1_alt 50971 5 + 166743 agaga s panTro4.chr21 3663840 5 + 32799110 agaga i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16913881 5 + 48394510 gaagg i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4424423 5 + 32716333 gaagg i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168537587 5 - 198365852 aaaga i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162200659 5 - 192294377 aaaga i macFas5.chr3 C 0 C 0 s chlSab2.chr2 14986285 5 - 90373283 AGAGA i chlSab2.chr2 I 158 C 0 e calJac3.chr21 21913913 0 + 50472720 C e canFam3.chr31 13798845 0 + 39895921 C e mm10.chr16 78101677 0 + 98207768 C e papAnu2.chr3 150885183 294 - 180432695 M a score=21603.000000 s hg38.chr21_KI270874v1_alt 50976 11 + 166743 gaggaaggaag s panTro4.chr21 3663845 11 + 32799110 gaggaaggaag i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16913886 11 + 48394510 aaggaaggaag i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4424428 11 + 32716333 aaggaaggaag i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168537592 11 - 198365852 aagaaagaaag i rheMac3.chr3 C 0 I 292 s macFas5.chr3 162200664 11 - 192294377 aagaaagaaag i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150885481 11 - 180432695 gagggagggag i papAnu2.chr3 M 294 C 0 s chlSab2.chr2 14986290 11 - 90373283 GAAgaaggaag i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21913913 0 + 50472720 C e canFam3.chr31 13798845 0 + 39895921 C e mm10.chr16 78101677 0 + 98207768 C a score=42988.000000 s hg38.chr21_KI270874v1_alt 50987 35 + 166743 ggaggaaggaaggaaggaaggaaggaaggaaggaa s panTro4.chr21 3663856 20 + 32799110 ggaggaaggaaggaaggaag--------------- i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16913897 35 + 48394510 gaaggaaggaaggaaggaaggaaggaaggaaggaa i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4424439 35 + 32716333 gaaggaaggaaggaaggaagggaggcaggaaggaa i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162200675 35 - 192294377 aaagaaagaaagaaagaaagaaagaaagaaagaaa i macFas5.chr3 C 0 M 1240 s papAnu2.chr3 150885492 35 - 180432695 ggagggagggaggaaggaaggaaggaaggaagtaa i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14986301 34 - 90373283 -gaagaaggaaggaaggaaggaaggaaggaaggaa i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21913913 0 + 50472720 C e canFam3.chr31 13798845 0 + 39895921 C e mm10.chr16 78101677 0 + 98207768 C e rheMac3.chr3 168537603 292 - 198365852 I a score=15354.000000 s hg38.chr21_KI270874v1_alt 51022 32 + 166743 agaagg---------------aaggaaggaaggaagcgaagga---aaag s panTro4.chr21 3663876 31 + 32799110 -gaagg---------------aaggaaagaaggaagcgaagga---aaag i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16913932 47 + 48394510 ggaagggaaggaagggaaggaagggaaggaagggaaggaaggg---aagg i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4424474 43 + 32716333 ggaagggagggagg-------gaggcagggagggagggagggaggcaggg i nomLeu3.chr25 C 0 C 0 s papAnu2.chr3 150885527 22 - 180432695 ----gg---------------aaggaaggaaggaagg---------aagg i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14986335 26 - 90373283 ggaagg---------------aaggaaggaaggaagg---------aagg i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21913913 0 + 50472720 C e canFam3.chr31 13798845 0 + 39895921 C e mm10.chr16 78101677 0 + 98207768 C e rheMac3.chr3 168537603 292 - 198365852 I e macFas5.chr3 162200710 1240 - 192294377 M a score=11328.000000 s hg38.chr21_KI270874v1_alt 51054 15 + 166743 aaggaaaggaaggaa s panTro4.chr21 3663907 15 + 32799110 aaggaaaggaaggaa i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16913979 15 + 48394510 aaggaaaggaaggaa i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4424517 15 + 32716333 agggaggggaaggaa i nomLeu3.chr25 C 0 C 0 s papAnu2.chr3 150885549 10 - 180432695 aagga-----aagga i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14986361 13 - 90373283 aaggaagg--aagga i chlSab2.chr2 C 0 C 0 s mm10.chr16 78101677 15 + 98207768 GGGCAACAGAAAGAA i mm10.chr16 C 0 C 0 e calJac3.chr21 21913913 0 + 50472720 C e canFam3.chr31 13798845 0 + 39895921 C e rheMac3.chr3 168537603 292 - 198365852 I e macFas5.chr3 162200710 1240 - 192294377 M a score=6573.000000 s hg38.chr21_KI270874v1_alt 51069 3 + 166743 agg s panTro4.chr21 3663922 3 + 32799110 agg i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16913994 3 + 48394510 agg i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4424532 3 + 32716333 agg i nomLeu3.chr25 C 0 C 0 s papAnu2.chr3 150885559 3 - 180432695 agg i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14986374 3 - 90373283 agg i chlSab2.chr2 C 0 C 0 s mm10.chr16 78101692 3 + 98207768 AGC i mm10.chr16 C 0 C 0 s canFam3.chr31 13798845 3 + 39895921 AGG i canFam3.chr31 C 0 C 0 e calJac3.chr21 21913913 0 + 50472720 C e rheMac3.chr3 168537603 292 - 198365852 I e macFas5.chr3 162200710 1240 - 192294377 M a score=35166.000000 s hg38.chr21_KI270874v1_alt 51072 13 + 166743 aaggaagATTTTA s panTro4.chr21 3663925 13 + 32799110 aaggaagATTTTA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16913997 13 + 48394510 aaggaagATTTTA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4424535 13 + 32716333 aaggaagATTTTA i nomLeu3.chr25 C 0 C 0 s papAnu2.chr3 150885562 13 - 180432695 aaggaaaatttta i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14986377 13 - 90373283 aaggaaAATTTTA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21913913 13 + 50472720 AAGGAAAATTATA i calJac3.chr21 C 0 C 0 s mm10.chr16 78101695 13 + 98207768 AAGGAGAATTTAA i mm10.chr16 C 0 C 0 s canFam3.chr31 13798848 13 + 39895921 AAGGAAAATTTAA i canFam3.chr31 C 0 C 0 e rheMac3.chr3 168537603 292 - 198365852 I e macFas5.chr3 162200710 1240 - 192294377 M a score=29754.000000 s hg38.chr21_KI270874v1_alt 51085 9 + 166743 TTTCCTCCG s panTro4.chr21 3663938 9 + 32799110 TTTCCTCTG i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16914010 9 + 48394510 TTTCCTCTG i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4424548 9 + 32716333 TTTACTCTG i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162201951 9 - 192294377 TTTCCTCTG i macFas5.chr3 M 1240 C 0 s papAnu2.chr3 150885575 9 - 180432695 tttcctctg i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14986390 9 - 90373283 TTTCCTCTT i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21913926 9 + 50472720 TTTCCTCTG i calJac3.chr21 C 0 C 0 s mm10.chr16 78101708 9 + 98207768 TTTCCTCTG i mm10.chr16 C 0 C 0 s canFam3.chr31 13798861 9 + 39895921 TGTCATCTG i canFam3.chr31 C 0 C 0 e rheMac3.chr3 168537603 292 - 198365852 I a score=3083163.000000 s hg38.chr21_KI270874v1_alt 51094 790 + 166743 ATTAAAAGTTGCATTTTCTTTTCTGTCTCCTTTTTTCCTTCCTCTCCCCCATCTGCCCACTGT----T---CCCTC--TTTCC------------------------TTTTCTCCATTTGTATGACAGTGGCACTGATTCAAAGAAGGGGTGGAGTCCGAAATTTTGGGTGGTCTTAGTAAAGCTTTAGTCTTTGGCTAACCTCTCCTTAAATTGGTCAGAAGCCAAAAATTTCCAGTATTAGGGAGAGTCACTTTGAAAAGTTGTATA-TGCATGTCTGTGTGCATGTCAATATATTTGCTCTGGCTTAACAAGAAA-AACTGAAC-----------------------------------------------AA-CATATCCCTGTGTAAGCTGTGGTTCTTATTTGGTTTCAGTGTTCATTTATTTCAGTTTATTGTTTGACATCTCCCACTAGCTAAGCCAGGAAACTCATGGCAGATCTTCAAAAAATAACTCCACTCCCACATTTCTTTTTTTCTTTGTTCTGATTCTTTACTCTCTCTTACCCTCAAAAAGTTTAATGAAACAAGTGTTCAGGGAAAGATAGTATTTGCTTATTGTATCTTATTATAGTTTTAAGAACCAAACATAAAGTCTCCCT-TACAGCTTCTCTGTTTTATTAT-AAAATTATACTTGATTCAGATTTGTTTTGAAAGACCAGTT-TACTT-TTTTTAATTAAAAAGAGGAATACAATGTC----CTTTCCATAAGTAGACTCACAAAGAAGGTAGGAGTCATTTTCTTCCATTAATGTCACAACAAAACAGTCTTACATACTCTGAATTGGAGTGAAAATTAGAGA--AATAAATCACCTGC-ATGATGAGCATACATTAT s panTro4.chr21 3663947 790 + 32799110 ATTAAAAGTTGCATTTTCTTTTCTGTCTCCTTTTTTCCTTCCTCTCCCCCATCTGCCCACTGT----T---CCCTC--TTTCC------------------------TTTTCTCCATTTGTATGACAGTGGCACTGATTCAAAGAAGGGGTGGAGTCCGATATTTTGGGTGGTCTTAGTAAAGCTTTAGTCTTTGGCTAACCTCTCCTTAAATTGGTCAGAAGCCAAGAATTTCCAGTATTAGGGAGAGTCACTTTGAAAAGTTGTATA-TGCATGTCTGTGTGCATGTCAATATATTTGCTCTGGCTTAACAAGAAA-AACTGAAC-----------------------------------------------AA-CATATCCCTGTGTAAGCTGTGGTTCTTATTTGGTTTCAGTGTTCATTTATTTCAGTTTATTGTTTGACATCTCCCACTAGCCAAGCCAGGAAACTCATGGCAGATCTTCAAAAAATAACTCCACTCCCACATTTCTTTTTTTCTTTGTTCTGATTCTTTACTCTCTCTTACCCTCACAAAGTTTAATGAAACAAGTGTTCAGGGAAAGATAGTATTTGCTTATTGTATCTTATTATAGTTTTAAGAACCAAACATAATGTCTCCCT-TACAGCTTCTCTGTTTTATTAT-AAAATTATACTTGATTCAGATTTGTTTTGAAAGACCAGTT-TACTT-TTTTTAATTAAAAAGAGGAATACAATGTC----TTTTCCATAAGTAGACTCACAAAGAAGGTAGGAGTCATTTTCTTCCATTAATGTCTCAACAAAACAGTCTTACATACTCTGAATTGGAGTGAAAATTAGAGA--AAAAAATCACCTGC-ATGATGAGCATACATTAT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16914019 838 + 48394510 ATTAAAAGTTGCATTTTCTTTTCTGTCTCCTTTTTTCCTTCCTCTCCCCCATCTGCCCACTGT----T---CCCTC--TTTCC------------------------TTTTCTCCATTTGTATGACAGTGGCACTGATTAAGAGAAGGGGTGGAGTCCGATATTTTGGGTGGTCTTAGTAAAGCTTTAGTCTTTGGCTAACCTCTCCTTAAATTGGTCAGAAGCCAAGAATTTCCAGTATTAGGGAGAGTCACTTTGAAAAGTTGTATA-TGCATGTCTGTGTGCATGTCAATATATTTGCTCTGGCTTAACAAGAAA-AACTGAACAACAA---CTTGTCAGCCAGAGCAACAACTATTTCTCCCAAACTTAAAA-CATATCCCTGTGTAAGCTGTGGTTCTTATTTGGTTTCAGTGTTCATTTATTTCAGTTTATTGTTTGACATCTCCCACTAGCTAAGCCAGGAAACTCATGGCAGATCTTCAAAAAATAACTCCACTCCCATATTTCTTTTTTTCTTTGTTCTGATTCTTTACTCTCTCTTACCCTCACAAAGTTTAATGAAACAAGTGTTCAGGGAAAGATAGTATTTGCTTATTGTATCTTAGTATAGTTTTAAGAACCAAACATAAAGTCTCCCT-TACAGCTTCTCTGTTTTATTAT-AAAATTATACTTGATTCAGATTTGTTTTGAGAGACCAGTTATACTT-TTTTTAATTAAAAAGAGGAATGCAATGTC-TTTTTTTCCATCAGTAGACTCACAAAGAAGGTAGGAGTCATTTTTTTCCATTAATGTCTCAACAAAACAGTCTTACATACTCTAAATTGGAGTGAAAATTAGAGA--AATAAATCACCTGC-ATGATGAGCATACATTAT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4424557 800 + 32716333 ATTAAAAGTTGCATTTTCTTTTCTGTCTCCTTTTTTCCATCCTCTCCCCCATCTGCCC------------------------------------------------------------------ACAGTGGCACTGATTCAGAGAAGGGGTGGAGTCCGATATTTTGGGTGGTCTTAGTAAAGCTTTAGTCTTTGGCTAACCTCTCCTTAAATTGGTCAGAAGCCAAGAATTTCCAGTATTAGGGAGAGTCACTTTGAAAAGTTGTATA-TGCATGTGTGCGTGCATGTCAATATATTTGCTCTGGCTTAACAAGAAA-AACTGAAC---AA---CTTGTCAGCCAGAGCAACAATTATTTCTCCCAAACTTAAAA-CATATCCCTGTGTAAGCTGTGGTTCTTATTTGGTTTCAGTGTTCATTTATTTCAGTTTATTGTTTGACATCTCCCACTAGCTAAGCCAGGAAACTCATGGCAGATCTTCAAAAAATAACTCCACTCCCACATCTCTTGTTTTCTTTGTTCTGATTCTTTGCTCTCTCTTACCCTCACAAAGTTTAATGAAACAAGTGTTCAGGGAAAGATAGTATTTGCTTATTGTATCTTAGTATAG-TTTAAGAACCAAACATAAAGTCTCCCT-TACAGCTTCTCTGTTTTATTAT-AAAATTATACTTGATTCAGATTTGTTTTGAAAGACCAGTTATAC-T-TTTTTAATTAAAAAGAGGAATACAATGTC-TTTTTTTCCATAAGTAGACTCACAAAGAAGGTAGGAGTTATTTTTTTCCATTAATGCCTTAACAAAACAGTCTTACATACTCTGAATTGGAGTGAAAATTAGAGA--AATAAATCACCTGC-ATGATGAGTATACATTAT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168537895 836 - 198365852 ATTGAAAGTCGCATTttcttttctgtctccttttttccttcctctcccccatcttccctctgt----t---ccctc--tttcc------------------------ttttctccATTTGTATGACAGTGGCACTGATTCAGAGAAGGGGTGGAGTCCGATATTTTGGGTGGTCTTAGTAAAGCTTTAGTCTTTGGCTAACCTCTCCCTAAATTGGTCAGAAGCCAAGAATTTCCAGTTTTAGGGAGAGTCACTTTGAAAAGCTCTATA-TGCACGTCTGTGCGCATGTCAATATATTTGCTCTGGCTTAACAAGAAA-AACTGAACAACAA---CTTGTCAGCCAGAGCAACAACTATTTCTCCCAAACTTAAAA-CATATCCCTGTGTAAGTTGTGGTTCTTCTTTGGTTTCAGTGTTCATTTATTTCAGTTGATTGTTTGACATCTCCTACTAGCTAAGCCAGGAAACTGATGGCAGATCTTCAAAAAATAACTCCACTCCCACATTTATT-TTTTCTTTGTTCTGATTATTTACTCTCTCTTGCCCTCATAAAGTTTAATGAAACAAGTGTTCAGGGAAAGATAGTATTTGCTTATTGTATCTTAGTATGGTTTTAAGAACCACACAAAAAGTCTCCTT-AAAAG-CTCTCCATTTTATTAT-AAAATTATACTTGATTCAGCCTTGTTTTGAAAGACCTTTTACACTA-TTTTTAATTAAAAAGAGGAATACAATGTC-CTTTTTTCCATAAGTAGACTCACAAAGAAGGTAGGAGTTATTTT-TTCCATTAATGTCTTAACAAAACAGTCTTACATCTTCTGAATTAGAGTGAAAATTAGAGG-AAAAAAACCACCTCC-ATGATGAGCATACATTAT i rheMac3.chr3 I 292 C 0 s macFas5.chr3 162201960 823 - 192294377 ATTGAAAGTCGCATTTTCTTTTCTGTCTCCTTTTTTCCTTCCTTTCCCCCATCTTCCCTCTGT----T---CCCTC--TTTCC------------------------TTTTCTCCATTTGTATGACAGTGGCACTGATTCAGAGAAGGGGTGGAGTCCGATATTTTGGGTGGTCTTAGTAAAGCTTTAGTCTTTGGCTAACCTCTCCCTAAATTGGTCAGAAGCCAAGAATTTCCAGTTTTAGGGAGAGTCACTTTGAAAAGCTCTATA-TGCACGTCTGTGCGCATG-------------TCTGGCTTAACAAGAAA-AACTGAACAACAA---CTTGTCAGCCAGAGCAACAACTATTTCTCCCAAACTTAAAA-CATATCCCTGTATAAGTTGTGGTTCTTCTTTGGTTTCAGTGTTCATTTATTTCAGTTGATTGTTTGACATCTCCTACTAGCTAAGCCAGGAAACTGATGGCAGATCTTCAAAAAATAACTCCACTCCCACATTTATT-TTTTCTTTGTTCTGATTATTTACTCTCTCTTGCCCTCATAAAGTTTAATGAAACAAGTGTTCAGGGAAAGATAGTATTTGCTTATTGTATCTTAGTATGGTTTTAAGAACCACACAAAAAGTCTCCTT-AAAAG-CTCTCCATTTTATTAT-AAAATTATACTTGATTCAGCCTTGTTTTGAAAGACCTTTTACACTA-TTTTTAATTAAAAAGAGGAATACAATGTC-CTTTTTTCCATAAGTAGACTCACAAAGAAGGTAGGAGTTATTTT-TTCCATTCATGTCTTAACAAAACAGTCTTACATCTTCTGAATTAGAGTGAAAATTAGAGG-AAAAAAACCACCTCC-ATGATGAGCATACATTAT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150885584 836 - 180432695 attgaaagtcacattttcttttctgtctccttttttccttcctctcctccatcttccctctgt----t---ccctc--tttcc------------------------ttttctccatttgtATGAGAGTGGCACTGATTCAGAGAAGGGGTAGAGTCCGATATTTTGGGTGGTCTTAGTAAAGCTTTAGTCTTTGGCTAACCTCTCCCTAAATTGGTCAGAAGCCAAGAATTTCCAGTTTTAGGGAGAGTCACTTTGAAAAGCTCTATA-TGCACGTCTGGGTACATGTCAATATATTTGCTCTGGCTTAACAAGAAA-AACTGAACAACAA---CTTGTCAGCCAGAGCAACAACTATTTCTCCCAAACTTAAAA-CATATCCCTGTGTAAGTTGTGGTTCTTCTTTGGTTTCAGTGTTCATTTATTTCAGTTGATTGTTTGACATCTCCTACTAGCTAAGCCAGGAAACTCATGGCAGATCTTCAAAAAATAACTCCACtcccacatttatt-ttttctttgttctgattATTTACTCTCTCTTGCCCTCATAAAGTTTAATGAAACAAGTGTTCAGGGAAAGATAGTATTTGCTTATTGTATCTTAGTATGGTTTTAAGAACCACACATAAAGTCTCCCT-TACAGCCTctccattttattat-aaaattatacttgATTCAGCCTTGTTTTGAAAGACCTTTTacacta-tttttaattaaaaagaggaATACAATGTC-CTTTTTTCCATAAGTAGACTCACAAAGAAGGTAGGAgttatttt-ttccattaatgtCTTAACAAAACAGTCTTACATCTTCTGAATTAGAGTGGAAATTAGAGG--aaaaaaccacctcc-atgatGAGCATACATTAT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14986399 835 - 90373283 ATTGAAAGCCGCATTTTCTTTTCTGTCTCCTTTTTTCcttcctctcccccatcttccctctgt----t---ccctc--tttcc------------------------ttttcTCCATTTGTATGACAGTGGCACTGATTCAGAGAAGGGGTGGAGTCCAATATTTTGGGTGGTCTTAGTAAAGCTTTAGTCTTTGGCTAACCTCTCCCTAAATTGGTCAGAAGCCAAGAATTTCCAGTTTTAGGGAGAGTCACTTTGAAAAGCTCTATA-TGCACGTCTGTGTGCATGTCAATATATTTGCTCTGGCTTAACAAGAAA-AACTGAACAACGA---CTTGTCAGCCAGAGCAACAACTATTTCTCCCAAACTTAAAA-CATATCCCTATGTAAGTTGTGGTTCTTATTTGGTTTCAGTGTTCATTTATTTCAGTTTATTGTTTGACGTCTCCTACTAGCTAAGCCAGGAAACTCATGGCAGATCTTCAAAAAATAACTCCACTCCCACATTTATT-TTTTCTTTGTTCTGATTATTTACTTTCTCTTGCCCTCATGAAGTTTAATGAAACAAGTGTTCAGGGAAAGATAGTATTTGCTTATTGTATCTTAGTATGGTTTTAAGAACCACACATAAAGTCTCCCT-TACAG--CCTCCATTTTATTAT-AAAATTATACTTGATTCAGCCTTGTTTTGAAAGACCTTTTACACTA-TTTTTAATTAAAAAGAGGAATACAATGTC-CTTTTTTCCATAAGTAGACTCACAAAGAAGGTAGGAGTTATTTT-TTCCATTAATGTCTTAACAAAACAGTCTTACATCTTCTGAATTAGAGTGAAAATTAGAGA-AAAAAAATCACCTCC-ATGATGAGCATACATTAT i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21913935 836 + 50472720 GTTAAAAGTTGCATTTTCTTT--TGTCTCCTTTTTTCCTTCTTCTCCCTCAGCTGCCCTCTGT----T---CCCTCTTTTTTT------------------------TTTTCTCCATGTATATGACAGTGGCCCTGATTCAAAGAGGAGGTGGAGTCTGATATTTTGGGTGGTCTTAGTAAAGCTTTAGTCTTTGGCTAACCTCTCCTTAAACTGGTAAGAAGCCAAGAATTTCCAGTATTAGGGAGAGTCACTTTGAAAAGCTGTATA-TGTATGTCTGTGTGCGTGTCAATATATTTGCTCTGGCTTCATAAGAAA-AACTGAACAACAA---CTTATCAGCCAAAGCAACAACTATTTCTCCCAAACTTAAAA-CATATCCCTTTGTAAATTGTGGTTCTTATTTGGTTTCAGTGTTCATTTATTTCAGTTTATTGTTTGACATCTTCCACTAGCTATGCCAGGAAACTCATGGCAGATCGTCAAAAAATAACTCCACTCCCACATTTATT-TTTCCTTTGTTCTGATTCTTTACTCTCTC-TACTCTCAGGAAGTTTAATGAAACAAGTCTTCAGGAAAAGATACTATTTGCTTCTTGTATCTTAGTATAGTTTTAGGAACCATACATAAAGTGTCCCT-CCCAGCTTCTCCTTTTTATTAT-AAAATTATGCTTAATTCAGATTTATTTTGAAAGA-CAGTTGTACTT-TTTTTAATTAAAAGACGAAATTTATTGTCTTTTTTTTCCATAAGTAGACTCACAAAGAATGTCGGAGTTATTTC-TTCCATTAATGTCTTAACAAA--AGTCTTACATTCTCTGAATTAGAGTGAAAATTAGAGGGAAAAAAATCACCTACAATAGTGAGCATACATTAA i calJac3.chr21 C 0 I 328 s mm10.chr16 78101717 855 + 98207768 ATTAAAAGTTGCGTTTTCTTTTCTGTCTC--TTTCTTCTTTCTCCCTGCCATCTGTCTTCCACATCGT---CCGTC--GTCCCCACCCCTACCCCTGGCCCCCTGAGTTTTCTCTATTTGTACCCGGGTGGCTGAGATCCAGAAGAAAGGTGGAGTCTCATCGTTTGGGTGGTCCGAGTAAATCTTTAGTCTTTGGCTAACCTCTCCTTAGACTGGAAAGTGGCCAAGAATTTGCAGTGTTAGGGAGAGTCACTTTGAAAGGCTGCAAAGCGTCCATCTGGGTGCATGTCAATACAGTTTCCCTGGTTTAGTAAAAAAGAAGGGAACAGAAA---CTTTCCAGCCAGAGCAACAACTATTTCTCCCAAACTTAAAAGTGCACCCTTGTATAAGCTGTGCTTCTTA-CCAGTTATAATGTCCCTTTATTTCAGTTTACGGCTTGACCCCTCCTGCTAGCTGAGCCAACAAACTCGT----CATTCTAAAGAAACTACTCCAC-CCGACATGTA---TTCTCTTTGTTCAGATTCTCTACTCTCTCTTGCCCTCACAACATTTCATTAAATGCAGGCTCAGG-ACAGATCGGATTTGCTTTTTGTATCTCAGTATAAATTTAGGAACATC----AAAATCTCTCTCCACGGCACCTCCTCTTTATTAT-AACATTAAATTAGGTTCGGGTTCATTCTGAAAGACCAGTTGTATTTCTTTTTAATTAAAAGGAGAAATAAAATCTC-CTTTTTTCTATAAGTAGGTTCACAAAGAATGCAGGAGTTATTTC-TCCCAATAATAACTTAACAAAAGAGATTTAAATCCTCTGAATTAGAGGGAGGATTAGAGA-GGGAAAGTCACCTGC-GTAGTTCGAATACATTAT i mm10.chr16 C 0 C 0 s canFam3.chr31 13798870 837 + 39895921 ATGAAAAATTGCATTTTCTT--CTGCCTCTCTTTCCTGTTCCTCTCTCCCATCTGCCCTCCAC----TTCACCCTC--CATCC-----------------CTTTAAGTTTTCTCCATTTGTATTACAGTGGCACAGATTCAGAGGAGGGGTGGAGTCTGACATTTCGGGTGGTCTTAATAAAGCTTTAGTCTTTGGCTAACCTCTCCTTAGACTGGAGAGTAGCCAAGAATTTCCAATATTAGGAAGAGTCACTTTGAAAAACTGTGTA-TGTATGTCGAAGTGCATGTCAATATATTTGTTCTGATTTAATAAGCAA-AACTGAACAACAGGGCCCTGTCAGCCAAAGCAACAACTATTTCTCCCAAACTTAAAA-CACATCCTTGTGTAAGTTATGGTTCTTATTTGGTTTTTGTGTTCATTTATTTCAGTTTATTGTTTGACATCTCCTACCAGCTGAGCCAGGAAACCCATGGCAGTGCTTCAAAAAATAACTCCAC-CCCACATTTATTTTTTAATTTGCTCTGGTTCTTTACTCTTT--TAAATTCACAAAGTTTCATGGAACAAGTGCCTAAAGA-AGATAGCATTTGCTTTTTA------AGTATAGTTTTAGAAACCATATGTAAAATATCTCT-TGCAGCTCCTCTTTTTTATTAGAAAAATTATATTAGATTCATATTTGTTTTGAAAAGTCAGTTGTAT---ACTTTAATTAAAGGGAGAAATAAAAAGTC--TTCTTTCCTAAAGCAAGCTTACAAAGAATGGAGAAGTTATTTC-TCCTAATAATGACTTAACAAATGAGATTTCAGTTCCCTAAATTGGGGTAAAGATTAGGAA-GAAAAAACTATCTGT-ACTGTGATCATATATTAT i canFam3.chr31 C 0 C 0 a score=1519746.000000 s hg38.chr21_KI270874v1_alt 51884 435 + 166743 CATGGAATTTTTAAAGGCCTCATCTTTTGGGTACCTGGCAATAACTAAGC-AAAAATAACCAACAGGGT-----AAAAAAATGCC---------------------ACCATCATTTCAATGAAAATAA-CCAAACTGCTCCCAGAAAACAAAGTAGCAAATCCATTTAGGCTCACTGGTGCATGTCTGGAACTTTCCAAATGAAACCTTGCATC------AAAGAAAAGTTTAAACACTTTTCTTCAAGATCAGTC----AAAACTAAACTAAAATTG---CATGGCTTAAAGAGTTACAAATTTCCACTC-----------------TTAAAAGCAATCTTATTTTGGTTGCTTGCAGCTGGTCCCAAAGCAAGAAATGAAATATTTAAAATGGAGGAGTT-TGCAATATATTACTGG-ATCCTTTCTTAAGTGGCTATCCCTCCAAAGAATGCCAAAACTTTGTAGACT-TGATTAGGATTGCACTGGAGCCGG- s panTro4.chr21 3664737 434 + 32799110 CAGGGAATTTTAAAAGGCCTCATCTTTTGGGTACCTGGCAATAACTTAGC-AAAAATAACCAACAGGGT-----AAAAAAATGCC---------------------ACCATCATTTCAATGAAAATAA-CCAAACTGCTCCCAGAAAACAAAGTAGCAAATCCATTTAGGCTCACTGGTGCATGTCTGGAACTTTCCAAATGAAACCTTGCATC------AAAGAAAAGTTTGAACACTTTTCTTCAAGATCAGTC----AAAACTAAACTAAAATTG---CA-GGCTTAAAGAGTTACAAATTTCCACTC-----------------TTAAAAGCAATCTTATTTTGTTTGATTGCAGTTGAGTCCAAAGCAAGAAATGAAATATTTAAAATGGAGGA-TT-TGTAATATATTACTGGTATCCTTTCTTAAGTGGCCATCCCTCCAAAGAATGCCAAAACTTTGTAGACT-TGATTGGATTGGTACTGGAAATGG- i panTro4.chr21 C 0 I 1 s ponAbe2.chr21 16914857 434 + 48394510 CATGGAATTTTAAAAGGCCTCATCTTTTGGGTACCTGGCAAT-ACTTAGC-AAAAATAACCAACAGGGT--AAAAAAAAAATGCC---------------------AACATCATTTCAATGAAAATAA-CCAAACTGCTGCCAGAAAACAAAGTAGCAAATCCATTTAGGCTCACTGGTGCATGTCTGGAACTTTCCAAATGAAACCTTGCCTC------AAAGGAAAGTTTGAACACTTTTCTTCAAGATCAATC----AAAACTAAACTAAAATTG---CA-GGCTTTAAGAGTTACAAGTTTCCACTC-----------------TTAAGAGCAATCTTA-TTTGTTTGATTGCAGTTGG-TCCAAAGCAAGAAATGAAATATTTAAAATGGAGGA-TT-TGTAATATACTACTGGTATCCTTTCTTAAGTGGCTATCCCTCCAAAGAATGCCAAAACTTTGTAGACT-TGATTGGATTGGTACTGGAAATGG- i ponAbe2.chr21 C 0 I 1 s nomLeu3.chr25 4425357 439 + 32716333 CATGGAATTTTAAATGGCCTCATCTTTTGGGTACCTGGAAAT-ATTTAGTAAAAAATAACCAACAGGGTAAAAAAAAAAAATGCC---------------------AACATCATTTCAATGAAAATAA-CCAAACTGCTGCCAGAAAACAAAGTAGCAAATCCATTTAGGCTCACTGGTGCATGTCTGGAACTTTCCAAATGAAACCTTGCATC------AAAGGAAAGTTTGAACACTTTTCTTCAAGATCAATC----AAAACTAAACTAAAATTG---CA-GGCTTTAAGAGTTACAAATTTCCACTC-----------------TTAAGAGCAATCTTATTTTGTTTGATTGCAGTTGGATCCAAAGCAAGAAATGAAATATTTAAAATGGAGGA-TT-TGTAATATACTACTGGTATCCTTTCTTAAGTGGCTGTCCCTCCAAAGAATGCCAAAACTTTGTAGACT-TGATTGGATTGGTACTGGAAATGG- i nomLeu3.chr25 C 0 I 1 s rheMac3.chr3 168538731 433 - 198365852 CATGGAATTTTAAAAGGCCTTATCTTTTGGGTACCTGGCAAT-ACTTAGC-AAAAATAACCAACAGGGT----AAAAAAGATGTC---------------------AACATCATTTCAATGAAAATAG-CCAAACTGCTGCCAGAAAACAAAGTAGCAGATCCATTTAGGCTCATTGGTGCATGTCGGGAACTTTCCAAATGAAACCTTGCATC------AAAGGAAAGTTTGAACACTTTTCTTCAAGATCAACC----AAAACTAAACTAAAATTG---CA-GGTTTTAAGAGTTACAAATTTCCATTC-----------------TTAAGAGCAATCTTATTTTGTTTGATTGCAGTTGG-TCCAAAGCAAGAAATGAAATATTTAAAATGGAGGA-TT-TGTAATATACTGCTGGTATCCTTTCTTAAGTGGCTGTCCCTCCAAAGAATGCCAAAACTTTGTAGATT-TGATTGGATTGGTACTGGAAATGG- i rheMac3.chr3 C 0 I 1 s macFas5.chr3 162202783 433 - 192294377 CATGGAATTTTAAAAGGCCTTATCTTTTGGGTACCTGGCAAT-ACTTAGC-AAAAATAACCAACAGGGT----AAAAAAGATGTC---------------------AACATCATTTCAATGAAAATAG-CCAAACTGCTGCCAGAAAACAAAGTAGCAGATCCATTTAGGCTCATTGGTGCATGTCGGGAACTTTCCAAATGAAACCTTGCATC------AAAGGAAAGTTTGAACACTTTTCTTCAAGATCAACC----AAAACTAAACTAAAATTG---CA-GGTTTTAAGAGTTACAAATTTCCATTC-----------------TTAAGAGCAATCTTATTTTGTTTGATTGCAGTTGG-TCCAAAGCAAGAAATGAAATATTTAAAATGGAGGA-TT-TGTAATATACTGCTGGTATCCTTTCTTAAGTGGCTGTCCCTCCAAAGAATGCCAAAACTTTGTAGATT-TGATTGGATTGGTACTGGAAATGG- i macFas5.chr3 C 0 I 1 s papAnu2.chr3 150886420 433 - 180432695 CGTGGAATTTTAAAAGGCCTTATCTTTTGGGTACCTGGCAAT-ACTCAGC-AAAAATAACCAACAGGGT----AAAAAAGATGTC---------------------AACATCATATCAATGAAAATAG-CCAAACTGCTGCCAGAAAACAAAGTGGCAGATCCATTTAGGCTCATTGGTGCATGTCGGGAACTTTCCAAATGAAACCTTGCATC------AAAGGAAAGTTTGAACACTTTTCTTCAAGATCAacc----aaaactaaactaaaattg---CA-GGTTTTAAGAGTTACAAATTTCCATTC-----------------TTAAGAGCAATCTTATTTTGTTTGATTGCAGTTGG-TCCAAagcaagaaatgaaatatttaaaatggaggA-TT-TGTAATATACTGCTGGTATCCTTTCTTAAGTGGCTGTCCCTCCAAAGAATGCCAAAACTTTGTAGATT-TGATTGGATTGGTACTGGAAATGG- i papAnu2.chr3 C 0 I 1 s chlSab2.chr2 14987234 433 - 90373283 CATGGAATTTTAAAAGGCCTTATCTTCTGGGTACCTGGCAAT-ACTTAGC-AAAAATAACTAACAGGGT----AAAAAAGATGTC---------------------AACATCATTTCAATGAAAATAG-CCAAACTGCTGCCAGAAAACAAAGTAGCAGATCCATTTAGGCTCATTGGTGCATGTCGGGAACTTTCCAAATGAAACCTTGCATC------AAAGGAAAGTTTGAACACTTTTCTTCAAGATCAACC----AAAACTAAACTAAAATTG---CA-GGTTTTAAGAGTTACAAATTTCCATTC-----------------TTAAGAGCAATCTTATTTTGTTTGATTGCAATTGG-TCCAAAGCAAGAAATGAAATATTTAAAATGGAGGA-TT-TGTAATATACTACTGGTATCCTTTCTTAAGTGGCTGTCCCTCCAAAGAATGCCAAAACTTTGTAGATT-TGATTAGATTGGTACTGGAATTGG- i chlSab2.chr2 C 0 I 17 s calJac3.chr21 21915099 428 + 50472720 CAAGAAATTTCAAAAGGCCTCATCTTTTGGGTACCTGACAAT-ACTTAGT--AAAATAACCACCAGGGA-----AAAAAGATTCC---------------------AACGTCATTTTAATGCAAATAG-TCAAACGGCTGCCAGAAAACAAAGCAGCAAATCCATTTAGGCTCA-TGGTTCATGTCCGGAACTTTCCAAATGACAC--TGCATC------AAAGGAAAGTTTGAACAC-TTTCTACAGGGTCAATC----AAAACTAAACTAAAAATG---CA-GGTTTCAATAGTTACAAATTTTCACTC-----------------TTAAGAGCAAGCTTACTTTGCTTTATTGCAGTTGGGTCCAAAGCAAAAAACAAAATATTTAAAATGGAGGA-TT-TGTAATGCACTTCTGGTGTCCTTTCTTCAGTGGCTATCCCTCCAAAGAATGCCAAAACTTTATAGGTT-TGATTGAATTTATACTGGAAATGG- i calJac3.chr21 I 328 I 1 s mm10.chr16 78102572 446 + 98207768 CACAATTATTGAAGGGGATGTATCTTTT-GGTACCTGGCAAA-AGTTAAT-AAAAATACCCACAAAGGT----AACAATGATGT----------------------AGTGTCACTTCAGTGAAAATAACCCAAATTGCTGCCATTAGAAAAGGTTCTAAATCTACTTAGGCTCATCAATGCAGGCCTAGAAATTTCT-AATGAAGAACTTCATC------AAAGGAAGGTTTAAACACTTCATGCAAAAATCAAACTTGTAAAATTAAACTCAAACTGATTCA-ATTTTTAAGGGTCTCAAGTTCCCACTATTCTAATCTCTTAGCTGTTGAAATCATTCTTGAATCAAACTATGTCAGGTGGGCTACAAGCAAGGAAATGGATATTAGACATGGAAGA-CTGTGTAA-------CCAGTCTCCACTGTTGGGCAGC--TCCCTCTGAAAA---CCCTAATGCTATAAACTGTGATCAGAATGGTACTGAAAAAGA- i mm10.chr16 C 0 I 1 s canFam3.chr31 13799707 443 + 39895921 CACGGACTTTGAAAATGCCT-ATCTTTTTGGTACTTGGCAAC-ATATAGT-AAGAATAGCCACAAGGGAAAAAAAAAAAAAAgcccggggcgggggggggggggggcACATTATTTCCACAAACATAG-CCCAACTGTTGCCAAACAACAAAATAGCAAAT-TATCTAGGCTCATTGGTACATGTCT-TAACTTTCCAAATGAAACCTTGCATCAAAAAAAAAAAAAAGTTTGAGCACTTTCCTATAAGATCAATC----AAAACTAAACTACAACTGATACA-ACATTTAAGAGTTACAAATTTCCACTT----------------------------------------GATTGCAGTTGAATTAAAAGCAAGAAAGAGGGTATTTAAAATGAAGAG-TT-TGTAATACAACACTGGTTTCTTTTCTTAAGCAATTTTCTCTAAAAAGAATGCCAAAACTTTGTAAACT-TGAACAGACTAGGACTAGAAAATGT i canFam3.chr31 C 0 C 0 a score=50568.000000 s hg38.chr21_KI270874v1_alt 52319 17 + 166743 ACTCAGCACTGCAGATT s panTro4.chr21 3665172 17 + 32799110 AAACAACACTGCAAAAT i panTro4.chr21 I 1 C 0 s ponAbe2.chr21 16915292 17 + 48394510 AAACAACACTGCAAAAT i ponAbe2.chr21 I 1 C 0 s nomLeu3.chr25 4425797 17 + 32716333 AAACAACACTGCAAAAT i nomLeu3.chr25 I 1 C 0 s rheMac3.chr3 168539165 17 - 198365852 AAACAACACTGCAAAAT i rheMac3.chr3 I 1 C 0 s macFas5.chr3 162203217 17 - 192294377 AAACAACACTGCAAAAT i macFas5.chr3 I 1 C 0 s papAnu2.chr3 150886854 17 - 180432695 AAACAACACTGCAAAAT i papAnu2.chr3 I 1 C 0 s calJac3.chr21 21915528 17 + 50472720 AAACAACATTGCAAAAT i calJac3.chr21 I 1 C 0 s mm10.chr16 78103019 17 + 98207768 AAGCAGTACCACACTGT i mm10.chr16 I 1 C 0 s canFam3.chr31 13800150 17 + 39895921 AAACAACACTATAAAAT i canFam3.chr31 C 0 C 0 e chlSab2.chr2 14987667 17 - 90373283 I a score=485205.000000 s hg38.chr21_KI270874v1_alt 52336 126 + 166743 AGTGTAGAGCACGTTTTATCCAAAGCTAGCACGCAATGAATAAGCTTTATTTTT-------AAATGAAAAATTCCAAAGATACTGATTCACATAA----AGAGGGAGCATTTCAAGTTCACATTATGAAAAGTCATT s panTro4.chr21 3665189 123 + 32799110 AATGAAGAGAACATTTTATCC-AAGTTAGCACA-AATGAATAAGCTTTATTTTT-------AAATGAAAAATTCCAAAGATACTGATTCACAAAA----AGAGGGAGCATTTCAAGTTCACATTA-GAAAAGTCATT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16915309 123 + 48394510 AATGAAGAGAACATTTTATCC-AAGTTAGCACA-AATGAATAAGTTTTATTTTT-------AAATGAAAAATTCCAAAGATACTGAGTCACAAAA----AGAGGGAGCATTTCAAGTTCACATTA-GAAAAGTCATT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4425814 123 + 32716333 AATGAAGAGAACATTTTATCC-AAGTTAGCACA-AATGAATAAGCTTTATTTTT-------AAATGAAAAATTCCAAAGATACTGATTCACAAAA----AGAGGGAGCATTTCAAGTTCACATTA-GAAAAGTCATT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168539182 123 - 198365852 AATGAAGAGAACATTTTATCC-AAGTTAGCACA-AATGAATAAGCTTTATTTTT-------AAATGAAAAATTCCAAGGATACTGATTCACAAAA----AGAGGGAGCATTTCAAGTTCACATTA-GAAAAGTCATT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162203234 123 - 192294377 AATGAAGAGAACATTTTATCC-AAGTTAGCACA-AATGAATAAGCTTTATTTTT-------AAATGAAAAATTCCAAGGATACTGATTCACAAAA----AGAGGGAGCATTTCAAGTTCACATTA-GAAAAGTCATT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150886871 123 - 180432695 AATGaagagaacattttatcc-aagTTAGCACA-AATgaataagctttattttt-------aaatgaaaaattccaaggATACTGATTCACAAAA----AGAGGGAGCATTTCAAGTTCACATTA-GAAAAGTCATT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14987684 123 - 90373283 AATGAAGAGAACATTTTATCC-AAGTTAGCACA-AATGAATAAGCTTTATTTTT-------AAATGAAAAATTCCAAGGATACCGATTCACAAAA----AGAGGGAGCATTTCAAGTTCACATTA-GAAAAGTCATT i chlSab2.chr2 I 17 C 0 s calJac3.chr21 21915545 123 + 50472720 AACAAAGAGAACATTTTATCC-AGGTTAGCACA-AATGAATAACCCTTATTTTT-------AAATGAAAAATTCCAAGAATACTGATTCACAAAA----CGAGGGAGCATTTCAAGTTCACATTA-GAAAAGTCATG i calJac3.chr21 C 0 C 0 s mm10.chr16 78103036 134 + 98207768 AATAATGCAAATATGTGACCT-GGGTTAAAATA-ATTAGATAAACCATACttttaaaattaaaaaaaaaaaCTCCAGCAGAAATGATATTCAAAGAAATAAAGGAAACATTTCAAATTCACATTT-GAAGATTTGtt i mm10.chr16 C 0 I 271 s canFam3.chr31 13800167 123 + 39895921 AATAACAAGAACATTTTATCC-AGGTTAGCACA-GATAGGTAAGCCTTGCTTTT-------AAATGAAAAATTCCATGGAAACTGACGTACAAAA----GGAGGGAGCATCTCAAGCTCACACTA-GAAAGGTCATT i canFam3.chr31 C 0 C 0 a score=306876.000000 s hg38.chr21_KI270874v1_alt 52462 92 + 166743 GGTAGG-ACCAACAATACAGTA--TTTAGTGTAGCTGTTCTGGAACACAATGGAGCTAAATTGATTAAGCAGGGATATGAGCTACAAAGTGAATA s panTro4.chr21 3665312 93 + 32799110 GGTAGGAACCAACAATACAGTA--TTTAGTGTAGCTGTTCTGGCACAAAATGGAGCTAAATTGATTAAGCAGGGATTTGAGCTACAAAATGAATA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16915432 95 + 48394510 TGTAGGAACCAACAATACAGTATTTTTAGTGTAGCTGTTATGGAACAAAATGGAGCTAAATTGATTAAGCAGGAATTTGAGCTACAAAATGAATA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4425937 93 + 32716333 GGTAGGAACCAACAATACAGTA--TTTAGTGTAGCTGTTCTGGAACAAAATGGAGCTAAGTTGATTAAGCAGGAATTTGAGCTACAAAATGAATA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168539305 93 - 198365852 GGTAGGAACCAACAATACAGTA--TTTAGTGTAGCTGTTCTGGAACAAAATGGAGCTAAATTGATTAAGCAGGAATTTGAGCTACAAAATGAATA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162203357 93 - 192294377 GGTAGGAACCAACAATACAGTA--TTTAGTGTAGCTGTTCTGGAACAAAATGGAGCTAAATTGATTAAGCAGGAATTTGAGCTACAAAATGAATA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150886994 93 - 180432695 GGTAGGAACCAACAATACAGTA--TTTAGTGTAGCTGTTCTGGAACAAAATGGAGCTAAATTGATTAAGCAGGAATTTGAGCTACAAAATGAATA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14987807 93 - 90373283 GGTAGGAACCAACTATACAGTA--TTTAGTGTAGTTGTTCTGGAACAAAATGGAGCTAAATTGATTATGCAGGAATTTGAGCTACAAAATGAATA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21915668 93 + 50472720 GGTAGGAACCAACAATGTAGGA--TTTAGTGTGGCTCTTCTAGAACAAAATGGAGCTAAATTGATTAAACAGGAATTTGAGCTACAAAATGAGTA i calJac3.chr21 C 0 C 0 s canFam3.chr31 13800290 79 + 39895921 GGCAGAGACCAGCTTCATATTA--TTTAGAGTATCTGTTCTGGAACAAAAGAGGGCTAAGCTGATTGAGCAGGGAGT---------AAGT----- i canFam3.chr31 C 0 C 0 e mm10.chr16 78103170 271 + 98207768 I a score=329779.000000 s hg38.chr21_KI270874v1_alt 52554 93 + 166743 TCAGAT-ATAACAGACTAATGCTTTAAAG-AACTACAAGCTGCTGATTCTCAA--TA---GCCTTATGAGTTTTTAATTCTTACATT----AT-------AGAACTCTATA s panTro4.chr21 3665405 93 + 32799110 TCAGGT-ATAACAGACTAATGCTTTAAAG-AACTACAAGCTGCTGATTCTCAA--TA---GCCTTATGAGTTTTTAATTCTTACATT----AT-------AGAACTCTATA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16915527 93 + 48394510 TCAGGT-ATAACAGACTAATGCTTTAAAG-AACTACAAGCTACTGATTCTCAA--TA---TCCTTATGATTTTTTAATTCTTACATT----AT-------AGAACTCTATA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4426030 93 + 32716333 TCAGCT-ATAACAGACTAATGCTTTAAAG-AACTACCAGCTACTGATTCTCAA--TA---GCCTTATGATTTTTTAACTCTTACATT----AT-------AGAACTCTATA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168539398 93 - 198365852 TCAGGT-AAAACAGACTAAGGTTTTAAAG-AACTACAAGCTACTGATTCTCAA--CA---TCCTTATGATTTTTGAATTCTTATATT----AT-------AGAACTCTATA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162203450 93 - 192294377 TCAGGT-AAAACAGACTAATGTTTTAAAG-AACTATAAGCTACTGATTCTCAA--CA---TCCTTATGATTTTTGAATTCTTATATT----AT-------AGAACTCTATA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150887087 94 - 180432695 TCAGGT-AAAACAGACTAATGTTTTAAAGTAACTACAAGCTACTGATTCTCAA--CA---TCCTTATGATTTTTGAATTCTTATATT----AT-------AGAACTCTATA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14987900 93 - 90373283 TCAGGT-AAAACAGACTAATATTTTAAAG-AACTACGAGCTACTGATTCTCAA--CA---TCCTTATGATTTTTGAATTCTTACATT----AT-------AGAACTCTATA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21915761 93 + 50472720 TCAGGC-ATAACAGACTAATGCTTTAAAG-AGCTACAAGCTATTAACTCTCAA--TA---ACCTTATGATTTTTGAATTCTTAAGTT----AT-------AGAACTCTATA i calJac3.chr21 C 0 C 0 s mm10.chr16 78103441 100 + 98207768 TCAGATAATACCAGACTAATGTTTTAAAG-AACTACAAACTACTTAATTCCAAGTTA---TATCTACATTTTTTGAATCTttttattggaaat-------agatttttata i mm10.chr16 I 271 I 6993 s canFam3.chr31 13800369 100 + 39895921 CCAGGT-ATTACAGATTAATG-TTTAAAG-AATGACA--CTACTTATTTTCAA--CATTCTCTTTATATTTTTTGAGTTCTTGAATT----ACTTATAGAAGAATTCCATA i canFam3.chr31 C 0 C 0 a score=49212.000000 s hg38.chr21_KI270874v1_alt 52647 13 + 166743 AACCAAATCACCT s panTro4.chr21 3665498 13 + 32799110 AACCAAATCACCT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16915620 13 + 48394510 AACCAAATCACCT i ponAbe2.chr21 C 0 I 2140 s nomLeu3.chr25 4426123 13 + 32716333 AACCAAATCACCT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168539491 13 - 198365852 AACCAAATCACCT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162203543 13 - 192294377 AACCAAATCACCT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150887181 13 - 180432695 AACCAAATCACCT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14987993 13 - 90373283 AACCAAATAACCT i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21915854 13 + 50472720 AACCAAATCACCT i calJac3.chr21 C 0 C 0 s canFam3.chr31 13800469 13 + 39895921 ACCCAAACCATCT i canFam3.chr31 C 0 C 0 e mm10.chr16 78103541 6993 + 98207768 I a score=400000.000000 s hg38.chr21_KI270874v1_alt 52660 130 + 166743 TCAAAATGATAATAAATTGAAAAT-CTTCAAAATAATCAATCTTCTTTGAATGTGCTTCTATTCAAAAA-GAATGTGAGAATTGAGTTTTTCCAAAAAGTGACAAACCTAATTTCAGTGATGATGACTTTTT s panTro4.chr21 3665511 130 + 32799110 TCAAAATGATAATAAATTGAAAAT-CTTCAAAATAATCAATCTTCTTTGAATGTGCTTCTATTCAAAAA-GAATGTGAGAATTGAGTTTTTCCAAAAAGTGACAAACCTAATTTCAGTGATGATGACTTTTT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16917773 130 + 48394510 tcaAAATGTTAATAAATTGAAAAT-GTTCAAAATAATCAGT-TTCTTGGAATGTGCTTCTACTCAAAAAGGAATGTGAGAATTGAGTTTTTCCAAAAAGTGACAAAACTAATTTCAATGACGATGAATTTTT i ponAbe2.chr21 I 2140 C 0 s nomLeu3.chr25 4426136 130 + 32716333 ACAAAATGATAATAAATTGAAAAT-CTTCAAAATAATCAATCTTCTTTGAATGTGCTTCTACTCAAAAA-GAATGTGATAATTGAGTTTTTCCAAAAAGTGGCAAACCTAATTTCAATGATGATGACTTTTT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168539504 127 - 198365852 TCAAAA---TAATGAACTGAAAAT-CTTCAAAATAATCAATCTTCTTTGAATGTGCTTCTATTCAAAAA-GAGTGTGAGAATTGAGTTTTTCGAAAAAGTGACAAACCTAATTTCAATGATGATGACTTTTT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162203556 127 - 192294377 TCAAAA---TAATGAACTGAAAAT-CTTCAAAATAATCAATCTTCTTTGAATGTGCTTCTATTCAAAAA-GAGTGTGAGAATTGAGTTTTTCGAAAAAGTGACAAACCTAATTTCAATGATGATGACTTTTT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150887194 127 - 180432695 TCAAAA---TAATGAACtgaaaat-cttcaaaataatcAATCTTCTTTGAATGTGCTTCTATTCAAAAA-GAGTGTGAGAACTGAGTTTTTCGAAAAAGTGACAAACCTAATTTCAATGATGAtgacttttt i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14988006 127 - 90373283 TCAAAA---TAATGAACTGAAAAT-CTTCCAAATAATCAATCTTCTTTGAATGTGCTTCTATTCAAAAA-GAATGTGAGAATTGAGTTTTTCCAAAAAGTGACAAACCTAATTTTAATGATGATGACATTTG i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21915867 130 + 50472720 TCAAACGGATAGTGAACAAAAAAT-CTTCAAAATAATCCATCTTCTTTGAATGTACTTCTACTCAAAAAAGAATTTGAAAACTGAGTTTCTCCAAAAAGCGGCAAACCTAA-TTAAATGATGATGGCTCTTT i calJac3.chr21 C 0 I 3859 s canFam3.chr31 13800482 128 + 39895921 TCAAAATGATAATGCACAAGAAACACTCCCAAATAATCAAACCTTTCTGAATGTGCCTCTGTTTCAGAA-AAATG---AAACTTTTTTTCTTCAAAAAGTGAGAAACCTAATTTCAATGACGATGACttatt i canFam3.chr31 C 0 C 0 e mm10.chr16 78103541 6993 + 98207768 I a score=10440.000000 s hg38.chr21_KI270874v1_alt 52790 3 + 166743 TTA s panTro4.chr21 3665641 3 + 32799110 TTA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16917903 3 + 48394510 TTA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4426266 3 + 32716333 TTA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168539631 3 - 198365852 TTA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162203683 3 - 192294377 TTA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150887321 3 - 180432695 tta i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14988133 3 - 90373283 TTA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21919856 3 + 50472720 TTA i calJac3.chr21 I 3859 C 0 s canFam3.chr31 13800610 3 + 39895921 tga i canFam3.chr31 C 0 I 137 e mm10.chr16 78103541 6993 + 98207768 I a score=774858.000000 s hg38.chr21_KI270874v1_alt 52793 239 + 166743 TTTCCAACTGGAG------------------------------------AAAGAGGCAAAGATCTA-GTTGCTATTT-AAGTTTGACAAAGTCTA---CATTTTGAGGAAATCTTATTATCCTTAGAATATTTAGAATAATGCTAGTAGTT-AAGAGTGAACAATACTGTCTCTGTTTCTATATAGCAGAATGAGCACATGCATCTAATTGCAATATTATCTGACAGTCTACTTAAACTATAGTAAAGTATTTTTT---AAAAGATTTAAACCCACAAAGACAC s panTro4.chr21 3665644 239 + 32799110 TTTCCAACTGGAG------------------------------------AAAGAGGCAAAGATCTA-GTTGCTATTT-AAGTTTGACAAAGTCTA---CATTTTGAGGAAATCTTATTATCCTTAGAATATTTAGAATAATGCTAGTAGTT-AAGAGTGAACAATATTGTCtctgtttcaatatagcagaatgagcacatgcatctaattgcaatattatctgacagtctacttaaactacagtaaagtatttttt---aaaagatttaaacccacaaagacac i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16917906 237 + 48394510 TTTCCAACTGGAG------------------------------------AAAGAGGCAAAAATCTA-GTTGCTATTT-AAGTTTGACAAAGTCTA---CATTTTGAGGAAATCTTATTATCCATAGGATATTTAGAATAATGCTAGTAGTT-ACGAGTGAACAATATCG--Gctgtttcaatacagtagaatgagcacacgtatctaattgtaatattatctgacagcctgcttaaactacagtaaagtatttttt---aaaagatttaaacccacaaagacat i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4426269 239 + 32716333 TTTCCAACTAGAG------------------------------------AAAGAGGCAAAGATCTA-GTTGCTATTT-AAGTTCGACAAAGTCTA---CATTTTGAGGAAATCTTATTATCCTTAGAATATTTAGAATAATGCTAGTAGTT-AAGAGTGAACAATACCAGCtctgtttcaatacagtagaatgagcacatgcatctaattgtaatattatctgatagcctacttaaactacagtaaagtatttttt---aaaagatttaaacccacaaagacat i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168539634 239 - 198365852 TTTCCAGCTGGAG------------------------------------AAAGAGGCAAAGATCTA-GTTGCTATTT-AAGTTTGACAAAGTCTA---CATTTTGAGGAAATCTTGTTATCCTTAGAATATTTAGAATAATGCTAGTAGTT-AAGAGTGAACAATATCGGCTCTGTTTCAATACAGTAGTGtgagcacgtgcatctaattgcaataatatctgacagcctactcaaactacagtaaagtatttttt---aaaagatttaaacccacaaagacac i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162203686 242 - 192294377 TTTCCAGCTGGAG------------------------------------AAAGAGGCAAAGATCTA-GTTGCTATTT-AAGTTTGACAAAGTCTACATCATTTTGAGGAAATCTTGTTATCCTTAGAATATTTAGAATAATGCTAGTAGTT-AAGAGTGAACAATATCGGCTCTGTTTCAATACAGTAGTGtgagcacgtgcatctaattgcaataatatctgacagcctactcaaactacagtaaagtatttttt---aaaagatttaaacccacaaagacac i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150887324 241 - 180432695 tttccagCTGGAG------------------------------------AAAGAGGCAAAGATCTA-GTTGCTATTT-AAGTTTGACAAAGTCTA---CATTTTGAGGAAATCTTGTTATCCTTAGAATATTTAGAATAATGCTAGTAGTTAAAGAGTGAACAATATCGGCTCTGTTTCAATACAGTAGTGTGAGCACGTGCATCTAATTGCAATAATATCTGACAGCCTACTCAAACTAcagtaaagtatttttta--aaaagatttaaacccacaaagacac i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14988136 239 - 90373283 TTTCCAACTGGAG------------------------------------AAAGAGGCAAAGATCTA-GTTGCTATTT-AAGTTTGACAAAGTCTA---CATTTTGAGGAAATCTTGTTATCCTTAGAATATTTAGAACAATGCTAGTAGTT-AAGAGTGAACAATATCGGCTCTGTTTCAATACAGTAGTAtgaacacatgcatctaattgcaataatatctgacagcctacttaaactacagtaaagtatttttt---aaaagatttaaacttacaaagacac i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21919859 238 + 50472720 TTTACAATTGAAG------------------------------------AAAGAGGCAAAGATCCA-GCTGCTATTT-AAGTTTTATATAGTCTA---CATTTGGGGAAAATCTAATTATCCTTAGAATATTTAGAATAATGCTAATAGTT-AAGAGTGAATAACATTGGCtctgtttcaatatagtagaatgagcacatgcatctaattgtaatatcatctgacaatctact-aaacaacagtaaagtattttta---aaaagatttatacccacaaaaatac i calJac3.chr21 C 0 C 0 s canFam3.chr31 13800750 269 + 39895921 taaccaactgaggcacccaggtgcccTGACTTTTCCTTATTTTCAATTTCAAGGGACAAAGAGCTACCTTGGAATTTGAAGTTTTACA-AGTGCA---CACTTTGAAGATATCTTTTTATCCTAAGAATATTTAGAAGAAT-------ATT-AATAGTGACTAACAATGACTCTATttcaatatggtagattgagcacatacatctaattacaatatttcctgaagccctactaaaactatagtaaagtattttttagtaaagTATTTTAA---AAAAaaacac i canFam3.chr31 I 137 I 13813 e mm10.chr16 78103541 6993 + 98207768 I a score=3687952.000000 s hg38.chr21_KI270874v1_alt 53032 1329 + 166743 AAAGAATAAGAATAAAGATAACACTGCATTGTGAGAGTTGAATGacaca--------cacagacacacacacacac----------------------------acagagag--------------------------agaaagagagagaTTGACTAACGGCTATTTCCTCCCACTAGTAGTTATGGGAAACTTAGGGTAAaatctaatttatgtcagagaatactcaaaaggcataggaactaacagcaacaggtgactttataatgagggtttatgggagacaggag------------------------------ataaaataaagaggcccagagaaaagctt-tttgagaaacaagcagatctcaggatcctctacttgattccatgttgctgagcaagtgccctaccagcacac------gtgtagaatgctggaagcttattttctagaaatgattaaaAaaataaataaataaataaataaaAGAGGATACTTTCAtttcctgtggttgtagtaaaagaagtcaccacaaatgggggtttcaaacttcaaaaatgtattctctctcagttctagaggtcagaactctaaaatcagtttcactgaatcaaatgcaaggtgttggcaggacctcatttcctcc---------atgagagagtccctccctgacttcttctagcttTCTCAAATGGCTGTGGCTctccaaactctgcctgtatagtcacaccgtctcctttcctgtgcatgtcaaatctccctctgcctctctttcacaagggtacaagagatctcacccaaataatgcaatacagtcctaccatgtcaagatt----cttagttagatctgc-------aaagacccttatttcttataaggtaat-attttcaggttccagggattaggacttgatgtgttttggtggccattaAAAATAGTGCCCTTGCTCTAATACAAAGAATATGTAATTTGCgaatgccaggcaccgttgagggcataggtaccataaatgactatatgaaaagaaacacaccaacttcttcctcacttagcttccataatgccaaaaaaagtggactcttaccttcccttaaatagatctaaaagctctactgtaaggaacttgattagtccaaaaagaaagttctaaagttagtgcccccaaaatgcccccaccaccagattattctgcagtgaagctcaaagtcaacaaatcagatccacatgatcacagtctccattcagtcttttattcttccactctt-aatcacaggcatacagagattgccagatatctgagagaagcttcaaacatggaagatagactctaaaataaacaaacaaaaagcaaATACCTCTTTGGGGGTAGCAGGCTATTCAAGGAAAGAAGCTTACTTTTTATAGTAGTGATAGCCTCTGAACAAT-AAAAACAGATGG s panTro4.chr21 3665883 1329 + 32799110 aaagaataagaataaagataacactgcattgtgagagttgaatgacaca--------cacagacacacacacacac----------------------------agagagag--------------------------agaaagagagagattgactaacggctatttcctcccactagtagttatgggaaacttagggtaaaatctaatttatgtcagagaatactcaaaaggcataggaactaacagcaacaggtgactttataatgagggttcatgggagacaggag------------------------------ataaaataaagaggcccagagaaaagctt-tttgagaaacaagcagatctcaggatcctctacttgattccatgttgctgagcaagtgccctaccagcacac------gtgtagaatgctggaagcttattttctagaaatggttaaaaaaaataaaaaataaattaaaaaaaGAGGATACTTTCAtttcctgtggttgtagtaaaagaagtcaccacaaatgggggtttcaaacttcaaaaatgtattctctttcagttctagaggtcagagctctaaaatcagtttcactgaatcaaatgcaaggtgttggcaggacctcatttcctcc---------atgagagagtccctccctgatttcttctagcttTCTCAAATGGCTGTGGCTctccaaactctgcctgtatagtcacaccatctcctttcctgtgcatgtcaaatctccctctgcctctctttcacaagggtacaagagatctcacccaaataatgcaatacagtcctaccatgtcaagatt----cttagttagatctgc-------aaagacccttatttcttataaggtaat-attttcaggttccagggattaggacttgatgtgttttggtggccattaAAAATAGTGCCCTTGCTCTAATACAAAGAATATGTAATTTGTgaatgccaggcaccattgagggcataggtaccataaatgactatatgaaaagaaacacaccaacttcttcctcacttagcttccataatgccaaaaaaggtggactcttaccttcccttaaatagatctaaaagctctactgtaaggaacttgattagtccaaaaagaaagttctaaagttggtgcccccaaaatgcccccaccaccagattattctgcagtgaagctcaaagtcaacaaatcagatccacatgatcacagtctccattcagtcttttattcttccactctt-aatcacaggcatacagggattgccagatatctgagagaagcttcaaacatggaagatagactctaaaataaacaaacaaaaagcaaATACCTCTTTGGGGGTAGCAGGCTATTCAAGGAAAGAAGCTTACTTTTTATAGTAGTGATAGCCTCTGAACAAT-AAAAACAGATGG i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16918143 1346 + 48394510 aaagaataagaataaagataacactgcattttgagagttgaatgacaca--------cacagacacacacacagacacacacacacacacacacacacagcgagacagacag--------------------------agagaaagagagattgactaacggctatttcctcccaccagtagttatgggaaacttaggataaaatctaatttatgtcagagaatactcaaaaggcataggaactaacagcaacaggtgactttatactgagggtttatgggagacaggag------------------------------ataaaataaagaggcccagagaaaagctt-tttcagaaacaatgagatctcaggatcctctacttgattccatgttgctgagcaagtgccctaccagcacac------ttgtagaatgctggaagcttattttctagaaagg--taaaaAAAAAAAAAAA---------AAAAGAGGATACGTTCAtttcctacggttgttgtaaaagaagtcaccacaaat-ggggcttcaaacatcaaaaatgtattctctctcagttccagaggtcagaactctaaaatcagtttcactgaatcaaatgcaaagtgttggcaggacctcatttcttcc---------atgagagagtccctccctgatttcttctagcttTCTCAGATGGCTGTGGATctccaaactctgcttgtgtagtcacaccatctcctttcctgtgtatgtcaaatctccctctgcctgtcttttacaagggtacaagagatctcacccaaataatgcaatacagtcctactatgtcaagatt----cttagttagatctgc-------aaagacccttattccttataaggtaagaaatttcaggtcccagggattaggacttgatgtgttttggtggccatGAAGAATAGTAGCATTGCTCTAATACAAAGAATATGTAATTTGCgaatgccaggcaccgttgagggcataggtaccataaatgactatatgaaaagaaacacaccaacttcttcctcacttagcctccataatgccaaaaaaagtggactcttaccttctcttaaatagatctaaaagctcttctgtagggaactggattagtccaaaaagaaagttctaaagttggtgcccccaaaatgcccccaccaccagatcattctgccatgaagctcaaagtcaacaaatcagatccacatgatcacagtctccattcagtcttttattcttccactctt-aatcacaggcatacagggattgccagatatctgagagaagtttcaaacatggaagagaaactctaaaataaacaaacaaaaagcaaATACCTCTTTGGGGGTAGCAGGCTATTCAAGGAAAGAAGCTTACTTTTTATGGTAGAGATAGCCTCTGAACAAT-AAAAATAGATGG i ponAbe2.chr21 C 0 I 1 s nomLeu3.chr25 4426508 1297 + 32716333 aaagaataataataaagataacactgcattttgagagttgaatgacaca--------cacagacacacacacacac------------------acagagagagagagagag--------------------------agagagagagagattgactaatgactatttcctcccaccagtagttatgggaaacttaggataaaatctactttatgtcagagaatactcaaaaggcataggaactaacagcaacaggtgactttataataagggtttatgggagacaggag------------------------------ataaaataaggaggcccagagaaaagctt-tttgagaaacaatgagatctcaggatcctctacttgattccatgttgctgagcaagtgccctaccagcacacattccagtgtagaatgctggaagcttattttctagaaatggttaaaaaaaaaaaaaaa--------aaaaaaaGGAtatgttcatttcctgtggttgttgtaaaagaagtcaccacaaatgggggcttcaaacttcaaaaatgtattctctctcagttctagaggtcagaactctaaaatcagtttcactgaatcaaatgcaaggtgttggcaggacctcatttcctcc---------atgagagagtccctccctgatttcttctagctttctcaaatggctgtggatctccgaactctgcctctatagtcacactgtctcctttcctgtgtgtgtcaaatctccttctgcctctcttttacaagggtacaaaagatctcacccaaataatgcaagacagtcctactatgtcaagatt----cttagttagatctgc-------aaagacccttatttcttataagataat-attttcaggtcccggggattaggacttgatgtgttttggtggccattaAGAATAGTGGCCTTGCTCTAAGACAAAGAATATGTAATGTGCGAATGCCAGGCACCACTGAGGG--------------------------------------CAACTTCTTCCTCACTTAGCTTCCATAATGCCAAAAAAAGTGGACTCTCACCTTCCCTTAAATTGATCTaaaagctcttctgtaaggaacttgattagtccaaaaagaaagttctaaagttggtgcccccaaaatgcccccaccaccagatcattctgcagtgaagctcaa--tcaacaaatcagatccacatgatcacagtcttcattcagtcttttattcttccactctt-aatcacaggcatacagggattgccagatatccgagagaagcttcaaacatggaagagagactctaaaataaacaaacaaaaagcaaattCCTCTTTGGGGGTAGCAGGCTATTCAAGGAAAGAAGCTTACTTTTTATAGTAGTGATAGCCTCTGAACAAT-AAAAATAGATGG i nomLeu3.chr25 C 0 I 1 s rheMac3.chr3 168539873 1303 - 198365852 aaagaaca-----aaagataacactgcattttgagagttgaat--------------cacacacacacacacacac----------------------------acagagag--------------------------agagaaagagagattgactaatggctatttcctccccccagtagttatgggaaatgtaagataaaatctaatttatgtcagagaatactcaaaaggcataggaactaacagcaacaggtgactttataatgagagtttatgggagaatggag------------------------------ataaaataaagaggcccagagaaaagcttaactaagaaacaatgagatctcaggatcctctacttgattccatcttgctgagcaagtgccctaccagcacac------ttgtagaatgctggaagcttattttctagaaatgg--------aaaaaAAAA---------AAAAGAGGAtatgttcatttcctgtggttgttgtaaaagaagtcaccacaaatgggggcttcaaacatcaaaaatgtattctctctcagttctagaggtcagaactctacaatcagtttcactgactcaaatgcaaggtgttggcaggacctcatttcctcc---------atgagagcgtccctccctggtttcttctagcttTCTCAAATGACTGTGGATctccaaactcttcctgtatagtcacaccatctcctttcctgtgtatgtcaaatctccctctgcctctcttttacaaggttacaagagatttcacccaaatgatacaatatagtcctactatgtcaagatt----cttagttagatctgctaactaaaaagactcttatttcttgtaaggtaat-attttcaggtcccaggaattaggacttgatgtgttttggtggccattaAGAATACTAACCTTGCTCGAATACAAAGAATATGTAATTTGTGAATGTcaggcactgttgagggcataggtaccataaatgactatatgaatagaaacacaccaacttcttcctcacttagcttccataatgccaaaaaa-gtggactcttatcttctcttaaatagatttaaaagctctactgtagggaacttgattagtccaaaaagaaagttctaaagttggtgccctcaaaatgccc---ccatcagatcattctgcagtgaagctcaaagtcaacaaat---acccacatgatcacagtctccattcagtcttttattcttccattcttaaatcacaggcatacagggattgccagatagctgagagaagcttcaaacacagaagacagactctaaaataagcaaacaaaaagcaaATACCTCTTTGGGGGTAGTAAACTATCCAAGGAAAGAAGCTTACTTTTTATAGTAGTGATAGCCTCTGAACAAT-AAAAATAGATGG i rheMac3.chr3 C 0 I 36 s macFas5.chr3 162203928 1317 - 192294377 aaagaata-----aaagataacactgcattttgagagttgaatcacacacacacacacacacacacacacacacac----------------------------acacagaa--------------------------agagagagagagattgactaatggctatttcctcccaccagtagttatgggaaatgtaagataaaatctaatttatgtcagagaatactcaaaaggcataggaactaacagcaacaggtgactttataatgagagtttatgggagaatggag------------------------------ataaaataaagaggcccagagaaaagcttttttaagaaacaatgagatctcaggatcctctacttgattccatcttgctgagcaagtgccctaccagcacac------ttgtagaatgctggaagcttattttctagaaatgg--------aaaaaAAAA---------AAAAGAGGCTAAGTTCAtttcctgtggttgttgtaaaagaagtcaccacaaatgggggcttcaaacatcaaaaatgtattctctctcagttctagaggtcagaactctacaatcagtttcactgactcaaatgcaaggtgttggcaggacctcatttcctcc---------atgagagcgtccctccctggtttcttctagctttctcaaatgactgtggatctccaaactcttcctgtatagtcacaccatctcctttcctgtgtatgtcaaatctccctctgcctctcttttacaaggttacaagagatttcacccaaatgatacaatatagtcctactatgtcaagatt----cttagttagatctgctaactaaaaagactcttatttcttgtaaggtaat-attttcaggtcccagggattaggacttgatgtgttttggtggccattaAGAATACTAACCTTGCTCGAATACAAAGAATATGTAATTTGTGAATGTCAGGCACTGTTGAGGGCATAGGTACCATAAATGactatatgaatagaaacacaccaacttcttcctcacttagcttccataatgccaaaaaa-gtggactcttatcttctcttaaatagatttaaaagctctactgtagggaacttgattagtccaaaaagaaagttctaaagttggtgccctcaaaatgccc---ccatcagatcattctgcagtgaagctcaaagtcaacaaat---atccacatgatcacagtctccattcagtcttttattcttccattcttaaatcacaggcatacagggattgccagatagctgagagaagcttcaaacacagaagacagactctaaaataagcaaacaaaaagcaaATACCTCTTTGGGGGTAGTAAACTATCCAAGGAAAGAAGCTTACTTTTTATAGTAGTGATAGCCTCTGAACAAT-AAAAATAGATGG i macFas5.chr3 C 0 I 17 s papAnu2.chr3 150887565 1340 - 180432695 aaagaata-----aaagataacACTGCATTTTGAGAGTtgaatgacacacacacacacacacacacacacacacac----------------------------agagagagagagagagagaaagagagagagaaaaagagagagagagattgactAATGGCTATTTCCTCCCACCAGTAGTTATGGGAAATATAAGATAAAATCTAATTTATGTCAGAGAATACTCAAAAGGCATAGGAACTAACAGCAACAGGTGACTTTATAATGAGAGTTTATGGGAGAATGGAG------------------------------ATAAAATAAAGAGGCCCAGAGAAAAGcttttttaagaaacaatgaGATCTCAGGATCCTCTACTTGATTCCATCTTGCTGAGCAAGTGCCCTACCAGCACAC------TTGTAGAATGCTGGAAGCTTATTTTCTAGAAAcgg-----------aaaaat---------aaaagaggatatgTTCATTTCCTGTGGTTGTTGTAAAAGAAGTCACCACAAATGGGGGCTTCAAACATCAAAAATGTATTCTCTCtcagttctagaggtcagaactctaaaatcagtttcactgactcaaatgcaaggtgttggcaggacctCATTTCCTCC---------ATGAGAGCGTCCCTCCCTGGTTTCTTCTAGCTTTCTCAAATGGCTGTGGATCTCCAAACTCTTCCTATATAGTCACACCATCTCCTTTCCTGCGTATGTCaaatctgcctctgcctctcttttACAAGGTTACAAGAGATTTCACCCAAGTGATACAATATAGTCCTACTATGTCAAGATT----CTTAGTTAGATCTGCTAACTAAAAAGACTCTTATTTCTTGTAAGGTAAT-ATTTTCAGGTCCCAGGGATTAGGACTTGATGTGTTTTGGTGGCCATTAAGAACACTAACCTTGCTCGAATACAAAGAATATGTAATTTGTGAATGTCAGGCACTGTTGAGGGCATAGGTACCATAAATGACTATATGAATAGAAACACACCAACTTCTTCCTCACTTAGCTTCCATAATGCCAAAAAA-GTGGAATCTTATCTTCTCTTAAATAGATTTAAAAGCTCTACTGTAGGGAACTTGATTAGTCCAAAAAGAAAGTTCTAAAGTTGGTGCCCTCAAAATGCCC---CCATCAGATCATTCTGCAGTGAAGCTCAAAGTCAACAAAT---ATCCACATGATCACAGTCTCCATTCAGTCTTTTATTCTTCCATTCTTAAATCACAGGCATACAGGAATTGCCAGATAGCTGAGAGAAGCTTCAAACACAGAAGACAGACTCTAAAATAAGCGAACAAAAAGCAAATACCTCTTTGGGGGTAGTAAACTATCCAAGGAAAGAAGCTTACTTTTTATAGTAGTGATAGCCTCTGAACAAT-AAAAATAGATGG i papAnu2.chr3 C 0 I 17 s chlSab2.chr2 14988375 1317 - 90373283 aaagaata-----aaagaTAACACTGCATTCTGAGAGTTGAATGaca----------cacacacacacacacacac----------------------------agagagagagagaa--------------------agagagagagagaTTGACTAATGGCTATTTCCTCCCAccagtagttatgggaaatgtaagataaaatctaatttgtgtcagagaatactcaaaaggcataggaactaacagcaacaggtgactttataatgagggtttatgggagaatggag------------------------------ataaaataaagaggcccagagaaaagcttttttaagaaacaatgagatctcaggatcctctacttgattccgtcttgctgagcaagtcccctaccagcacgc------ttgtagaatgctggaagcttgttttctagaaatgg----aaaaaAAAAAAAA---------AAAAGAGGAtatgttcatttcctgtggttgttgtaaaagaagtcaccacaaatgggggcttcaaacatcaaaaatgtattctctctcagttctagaggtcagaactctaaaatcagtttcactgactcaaatgcaaggtgttggcaggacctcatttcctcc---------atgagagagtccctccctggtttcttctagctttctcaaatggctgtggatctccaaactcttcctgtatagtcacaccatctcctttcctgtgtatgtcaaatctccctctgcctctcttttacaaggttacaagagatttcacccaaatgatacaatatagtcctactatgtcaagatt----cttagttagatctgctaactaaaaagactcttatttcttgtaaggtaat-attttcaggtcccagggattaggacttgatgtgttttggtggccattaAGAATAGTAACCTTGCTCAAATACAAAGAATATGTAATTTGTGAATGCCAGGCACTGTTGAGAGCATAGGTACCACAAATGACTATATGAATAGAAACAcagcaacttcttcctcacttagcttccataatgccaaaaaa-gtggactcttatcttctcttaaacagatttaaaagctcttctgtagggaacttgattagtccaaaaagaaagttctaaagttggtgccctcaaaatgccc---ccatcagatcattctacagtgaagctcaaagtcaacaaat---agccacatgatcacagtctccattcagtcttttattcttccattctt-aatcacaggcatacagggattgccagatagctgagagaagcttcaaacacagaagacagactctaaaataagcaaacaaaaagcaaATACCTCTTTGGGGGTAGTAGACTATCCAAGGAAAGAAGCTTACTTTTTATAGTAGTGATACCCTCTGAACAATAAAAAATAGATGG i chlSab2.chr2 C 0 I 36 s calJac3.chr21 21920097 1308 + 50472720 aaagaataagaaaaaagataacaTTGCATTTTAAGAGTTGAATGGCACA--------CACAGAC----------------------------------------ACATAGAG--------------------------AGAGAGAAAGAGATGGACTAATGGCTATTTACTCCCACCAGGAGTTATAGGAATCTTAAGATAAAATCTAGTTTAT------------------------GGAACTAGCAGCAACAGGTACCTTCATAATGAGAGTTTTTGGAAGAAATAAGAAATATCTTATAAGGTGATATTTGTAAAAAAAAAAATAAAGACGCCCAGAgaaaagctt-tttgagaaacaatgagatctgaggatcccctacttgattccatgttgctaaccaagtaccttaacagcacac------ttgcagaatgctggaggcttattttctagaaatgg-----------taaaga---------aaaagagtATACACTCACttcctgtgg-tgttgtaaaagaagtcaccacagatgggggcttaaaacgtcaaaaatgtattctctttcagttcta-agttcagaaatctaaaatcagcttcaccgaattaaatgcaaggtgttggcaggacctcatttcctccagcggctctataagaaagtccctttcttgtttcgtctagcttTCTCAAATGAC--TGGATctccaaactctgcctgcatagt--cactgtctcctctcctgtgtatgtcaaatctccctctgtctttcttttgcaagggtataagagatctcacccagataatccaatgcagtcctactgtatcaagattcttacttagtcagatctgc-------aaagacccttatttcttataaggtgat-attttccgtttccaggaatgaggatttgatgtgttttggtggccattGAGAATAGTAGCCTCGCTgtaatacaaagaatatatgatttgagaattccaggcacagttgagggcataggtactataaatgactgtatgagtagaaacgcaccaacttcttcctcacttagcttccataatgccaaaaaa-gtagactcttaaccttccttaaatagatttaaaaggtcttctgtagggaacttgattagtccaaaaagaaagttctaaaatcggtgccacccaaacacctccaccaccagatcattctgcagtgaagctcaaaatcaaaaaatcacattcacatgatcacagtctccatccagtcttttattcttccactctt-aatcagagatatacagggattgccagatatctgagagaagtttcaaacatggaagggagactctaaaataaacaaacaagaagcaaACACCTCTTTGGGGATAATAGGCTGTTCAGGGAAAGAAGCTTAC-TTTTACAGTAGTGATAGCCTCTGAACAAT-AAAAATAAATGG i calJac3.chr21 C 0 C 0 e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I a score=12509.000000 s hg38.chr21_KI270874v1_alt 54361 15 + 166743 -AAACATTTAGAGACC- s panTro4.chr21 3667212 15 + 32799110 -AAACATTTAGAGACC- i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16919490 15 + 48394510 -AAACATTTAGAGAAC- i ponAbe2.chr21 I 1 C 0 s nomLeu3.chr25 4427806 15 + 32716333 -AAACATTTAGAGAAC- i nomLeu3.chr25 I 1 C 0 s macFas5.chr3 162205262 15 - 192294377 -AAATATTCAAACATC- i macFas5.chr3 I 17 I 4 s papAnu2.chr3 150888922 15 - 180432695 -aaatattcaaacaTC- i papAnu2.chr3 I 17 I 4 s calJac3.chr21 21921405 13 + 50472720 AAAAC----AGAGAACC i calJac3.chr21 C 0 C 0 e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I e rheMac3.chr3 168541176 36 - 198365852 I e chlSab2.chr2 14989692 36 - 90373283 I a score=7161457.000000 s hg38.chr21_KI270874v1_alt 54376 2486 + 166743 TGAAAGAACAAT---AAAAAAATTTAAGAATTGAAAGACTTaaactaaaattatctacccattcagtccatcaacatataaatagagaaaataagccattttcagatttgcaaaataccaaatttttgattttctcgtaaccttcctcaaaaagttattgaggatgtttactctgaaccaaaatggagtaatagaaactagatttaatctcttccttgatacaaacaaaaaa-agacaaaaataa-tgagaaagccatttgaaagacac--aacatcaggcaacaaaggtaaatcctaatattaccccagtttaccacctt--gagagtttacag-atccaaaatgagtgatgaaaaactcagatggagcccagaggctccctgagttgaggacacagagatgagactccagagagatgaagaacgaagttagagtttctaggaaagagtaccagagaggagagagctcacaggacgaaacccagagaactgcagaatgtgccccacaagtagcgatcagtgctataagtgagaagactacccaaagtaggggggaaaa---------------------cacccaaaagggcagtgttaacagcatctgcttctcacacagggatggtaagaggacctcatctcacccagcaatctgggaaacctctttgtttacaggcattggataggatacacagaaggatctcatctctggag----tacttttccagccctcttaacacatccaagaagcaaaaactcaaaggatcaatctgctttcaagtaacttgactgcatgctcaaaaaaactcaagaatatttataggaaacaaaagtgcaccggacccaaaaaaggaaaatgcataatatcca-tcaaccaatcaaaaa-ttgccagtcagacaaaaagcaggaaaatgtgattcattgtaaagcaatagagcaatcaatattaaactgacccagaactgaaaaagatgttagaattagcagacacatacatttaaaatgttattgttactatattccatatgtccagaaaattgagtagacacatggaagatatcttttttaactcaaatcaaacatctaaagatgaagatactggag-aaaaaatgaacttgaagatataataatagaaactatccaaatatgaaacatagagaaaaaaagaaaatgaatttttaaaaaaccattggtagctgtgagacaacttcaagcagccgaacatatgtgtatttagagtcttccatggaaaagagaaagaggaggaaaaagaacaaatattttaataaataacctcaaaaactatccaaatttgatgaaaactataaatccacagtct-aaaaagttcaatgaaccctgaacacaaaaaatgtgaggaaaactgcataagaatacatcataataaaattgctaaaagccggtgataaacagaaagtcttaaaagcagccaaagtaaaagcaaacactatgttcagatg-aagagacatcaagataagagcata-ttttttgttggaaacaatgcaagtgaaaagacaggagagtaatatatttaaagtactaaaggaagagaaaactgtcaacttaaaaatctatacctgagagataatatctttgaaaatatcaatgaaaataaaagattattttcgaagtcaaaataaagattattttcagacatacaaaagccacaggaatttatctcaaacaTACCaacaaataattaagttgaacaaattcctaatatttgaaaacaaaaaaaatcactttctaaataattcataggcctaaaa-aaattaaaagaacaaattcgagtgtattttaaac----------------------------agaataaaaatgaaagtgtgTtttaaaaagaataaaaatagaagtgcaattgttatgggttaaattgtgccctcaccccaaattatgttcttacccttagtacaccaaaatgtgactttatttgaaaataggatcattacaggtataatcacttaagttaagataaggtcatactgga----------tagggaaggctcttaacccagtttggttggtgcctttgcaagaaaaggagaaaagacacacacagagagaataccaactgatgacagagacagaaattagaatgataaaccaccaagctaaggaataccaaggattgttaccaccaccagaaactaagaaaggacaaggaaagattctgcccagtgactgcaggagaacattttggtgacatttcgactctggacttctagcctccagaactgtgagagaataaattactgttgtgttaagtgatgcagcatgtggtactttgttacagaaaccctagaaactaatataacatatcaaaatgtatgggatgcccttaaaatagtacttaacatttaatttaacctacttaatatttatacttgaaaataaaagtgatcttgtcaatgacattagcttccaAAGCAGGAAGAGGAGAAGG-AAAAAAATAAGTATCTGTGCAGAAATCAATTATCTAGAAATCACGAAACAAGTCAATGAAACCCAAAAC s panTro4.chr21 3667227 2485 + 32799110 TGAAAGAACAAT---AAAAAAATTTAAGAATTGAAAGACTTaaactaaaattatctacccattcagtccatcaacatataaatagagaaaataagccattttcagatttgcaaaataccaaa-ttttgattttcacgtaaccttcctcaaaaagttattgaggatgtttactctgaaccaaaatggagtaatagaaactagatttaatctcttccttgatacaaacaaaaaa-agacaaaaataa-tgagaaagccatttgaaagacac--aacatcaggcaacaaagataaatcctaatattaccccagtttaccacctt--gagagtttacag-atccaaaatgagtgatgaaaaactcagatggagcccagaggctccctgagttgaggacacagagatgagactccagagagatgaagaacgaagttagagtttctaggaaagagtaccagagaggagagagctcacaggacgaaacccagagaactgcagaatgtgccccacaagtagcgatcagtgctataagtgagaagactacccaaagtaggggggaaaa---------------------cacccaaaagggcagtgttaacagcatctgcttctcacacagggatggtaagaggacctcatctcacccagcaatctgggaaacctctttgtttacaggcattggataggatacacagaaggatctcatctctggag----tacttttccagccctcttaacacatcctagaagcaaaaactcaaaggatcaatctgctttcaagtaacttgactccatgcccaaaaaaactcaagaatatttataggaaacaaaagttcaccggacccaaaaaaggaaaatgcataatatcca-tcaaccaatcaaaaa-ttgccagtcagacaaaaagcaggaaaatatgattcattgtaaagcaatagagcaatcaatattaaactgacccagaactgaaaaagatgttagaattagcagacacatacatttaaaatgttattgttactatattccatatgtccagaaaattgagtagacacatggaagatatcttttttaactcaaatcaaacatctaaagatgaagatactggag-aaaaaatgaacttgaagatataataatagaaactatccaaatatgaaacatagagaaaaaaagaaaatgaatttttaaaaaaccattggtagctgtgagacaacttcaagcagccgaacatatgtgtatttagagtcttccatggaaaagagaaagaggaggaaaaagaaaaaatattttaataaataacctccaaaactatccaaatttgatgaaaactataaatccacagtct-aaaaagttcaatgaaccctgagcacaaaaaatgtgaggaaaactgcataagaatacatcataataaaattgctaaaaaccggtgataaacagaaagtcttaaaagcagccaaagtaaaagcaaacactatgttcagatg-aagagacatcaagataagagcata-ttttttgttggaaacaatgcaagtgaaaagacaggagagtaatatatttaaagtactaaaggaagagaaaactgtcaacttcaaaatctatacctgagagataatatctttgaaaatatcaatgaaaataaaagattattttcaaagtcaaaataaagattattttcagacatacaaaagccacaggaatttatctcaaacaTACCaacaaataattaagttgaacaaattcctaatatttgaaaacaaaaaaaatcactttctaaataattcataggcctaaaa-gaattaaaagaacaaattcgagtgtattttaaac----------------------------agaataaaaatgaaagtgtgttttaaaaagaataaaaatagaagtgtaattgttatgggttaaattgtgccctcaccccaaattatgttcttacccttagtacaccaaaatgtgactttatttgaaaataggatcattacaggtataatcacttaagttaagataaggtcatactgga----------tagggaaggctcttaacccagtttggttggtgcctttgcaagaaaaggagaaaagacacacacagagagaataccaactgatgacagagacagaaattagaatgataaaccaccaagctaaggaataccaaggattgttaacaccaccagaaactaagaaaggacaaggaaagattctgcccagtgactgcaggagaacattttggtgacatttcgactctggacttctagcctccagaactgtgagagaataaattactgttgtgttaagtgatgcagcatgtggtactttgttatagaaaccctagaaactaatataacatatcaaaatgtatgggatgcccttaaaatagtacttaacatttaatttaacctacttaatatttatacttgaaaataaaagtgatcttgtcaatgacattagcttccaaagcaggaagaggagaagg-aaaaaaataagtatctgtgcagaaatcaattatctagaaatcacgaaacaagtcaatgaaacccaaaac i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16919505 2494 + 48394510 TGAAAGAACAAT---AAAAACATTTAAGAATTGAAAGACTTaatctaaaattatctacccattcagtccatcaacatataaatagagaaaatgagccattttcagatttgcaaaataccaaa-ttttgattttcacttaaccttcttcaaaaagttattgaggatgtttactctgaaccaaaatggagtaatagaaactagatttaatctcttccttgatacaaacaaaaaacagacaaaaataa-tgagcaagccatttgaaagacactgaacatcaggcaacaaaggtaaatcctaatattaccccagtttaccacctt--gagagtttacag-atccaaaatgagtgatgaaaaactcagatggagcccggaggctccctgagttgaggacacagagataagactccagagagatgaaa---gcaggtagagtttctaggaaagagtaccagagaggagagagctcacaggacgaaacccagagagctgcagaatgtgctccacaagtagcgatcagtgctataagtgagacgattacccaaagtagggggaaaaacacccaaagtagggggaaaatcacccaaaaggacagtgttaacagcatctgcttctcacatagggatggtaagaggacctcatctcacccagcaatctgggaaacctctttgtttacaggcattggataggatacacagaaggatctcatctctagag----tacttttccagccctcttaacacatcctagaagcaaaaactcaaaggatcaatctgctttcaagtaatttgactccatgcccaaaaaagctcaaaaatatttataggaaacaaaagtgcactggacccaaaaaaggaaaatgcataatatcca-tcaaccaatcgaaaatttgccagtcagacaaaaagcaggaaaatatgattcattgtaaagcaatagagcaatcaatattaaactgacccagaaatgaaaaagatgttagaatcagcagacacatacatttaaaatgtta---ttactatattccatatgtccagaaagttgagtagacacatggaagatatcttttttaactcaaatcaaacatctaaa-atgaagatactggag-aaaaaatgaacttgaagatataataatagaaactatccaaatatgaaacatagagaaaaaaagaaaatgaatttttaaaaaaccattggtagctgtgagacaacttcaagcagctgaacatatgtgtatttagagtcttccatggaaaagagacaaaggaggaaaaagaaaaaatattttaataaataacctccaaaactatacaaatttgatgaaaactataaatccacagtct-aaaaaattcaatgaaccctgagcacaaaaaatatgaagaaaactgcataagaatacttcataataaaattgctaaaaaccggtgataaacagaaagtcttaaaagcagccaaagaaaaagcaaacactatgttcagatg-aagagacatcaaggtaagagcata-ttttttgttggaaacaatgcaagtgaaaagacagtagagtaatatatttaaagtactaaaggaagagaaaactgtcaacttcaaaatctatacctgagagataatgtctttgaaaatatcaatgaaaataaaagattatttttgaagtcaaaataaagattattttcagacatacaaaagccacaggaatttatctcaaacaTACCaacaaataattaagttgaacaaattcctaatatttgaaaac-aaaaaaatcaccttataaataattcataggcctaaaacaaattaaaagaacaaatttgagtgtattttaaac----------------------------agaataaaaataaaagtgtgttttaaaaagaataaaaataaaagtgcaattgtta--ggttaaattgtgccctcaccccaaattatgttcttacccttagtacaccaaaatgtgactttatttgaaaataggatcattacaggtataatcacttaagttaagataaggtcatactgga----------tagggaaggctcttaacccagtttggttggtgcctttacaagaaaaggagaaaagacacacacagagagaataccaactgatgacagaggcagaaattagcaggataaaccaccaagctaaggaataccaaggattgttaccaccaccagaaactaagaaaggacaaggaaagattctgcccagtgactgcaggagaaaattttggtgatatttcgactctgggcttctagcctccagaactgtgagagactaaattactgttgtgttaagtgatgcagcatgtagtactttgttatagaaaccctagaaactaatacaacacatcaaaatatatgggatgcccttaaaatagtacttaacatttaatttaacctacttaatatttatacttgaaaataaaaatgatcttgtcactgacattagcttccaaagcaggaagaggagaagg-aaaaaaataagtatcagtgcagaaatcaattatctagaaatcacaaagcaagtcaat-------caaac i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4427821 2471 + 32716333 TGAAAGAACAAT---AAAAAAATTTAAGAATTGAAAGACTTaaactaaaattatctacccattcagtccatcaacatataaatagagaaaataagccattttcagatttgcaaaataacaaa-ttttgattttcacgtaaccttcctcaaaaagtttttgaggatgtttactctgaaccaaaatggagtaatagaaactagacttaatctcttccttgatacaaacataaaacagacaaaaataa-tgagaaagccatttgaaagacactgaacatcaggcaacaaaggtaaatcctaatattaccccagtttaccacctt--gagagtttacag-atccaaaatgagtgatgaaaaa--cagatggagcccggaggctccctgagttgaggacacagagatgaggctccagagagatgaag---gcaggtagaatttctaggaaacagtaccagagaggggagagctcacaggatgaaacccagagagctgcagaatgtgccccacaagtagtgatcagtgctgtaagtgagaagactacccaaagtaggggaggaaa---------------------cacccaaaaggacagtgttaacagcatctgcttctcacacagggatggtaagaggacctcatctcacccagcaatctgggaaacctctttgtttacaggcattggataggatacacagaaggatctcatctctagag----tacttttccagccctcttaacacatcctagaagcaaaaactcaaaggatcaatctgctttcaagtaacttgactccatgcccaaaaaagctcaagaatatttataggaaacaaaagtgcaccagacccaaaaaaggaaaatgcataatatcta-tcaaccaatcaaaaa-ttgccagtcagacaaaaagcaggaaaatacgattcattgtaaagcaatagagcaatcaatattaaactgacccagaactgaaaaagatgttagaattagcagacacatacatttaaaatgttattgttactatattccatatgtccagaaagttgagtagacacatggaagatctcttttttaactcaaatcaaacatgtaaagatgaagatactggag-aaaaaatgaacttgaagatataataatagaaactatccaaataggaaacatagagaaaaaaagaaaatgaatttttaaaaaaccattggtagctgtgagacaacttcaagcagccgaacatatgtgtatttagagtcttcgatggaaaagagaaagaagaggaaaaagaaaaaatattttaataaataacctccaaaactatccaaatttgatgaaaactataaatccacagtct-aaaaagttcaatgaaccctgagcacaaaaaatatgaagaaaactgcataagaatacatcataacaaaattgctaaaaaccggtgataaacagaaagtcttaaaagcagccaaagaaaaagcaaacactatgttcagatg-aagagacatcaagataagagcata-ttttttgttggaaacaatgcaagtgaaaaggcagtagagcaatatattcaaagtactaaaggaagagaaaactgtcaacttcaaaatctatacctaagagataatatctttgaaaatatttatgaaaataaacgattattttcaaagtcaaaataaagattattttcagacatacaaaagccacaggaatttatctcaaacaTACC----AATAATTAAGTTGAACaaattcctaatatttgaaaac-aaaaaaatcactttctaaataattcataggcctaaaaaaagttaaaagaacaaatttgagtgtattttaaac----------------------------agaataaaaataaaagtgtattttaaaaagaataaaaataaaggtgcaattgctatgggttaaattgtgcccttaccccaaattatgttcttacccttagtacaccaaaatgtgactttatttgaaaataggatcattacaggtataatcacttaagttaagataaggtcatactgga----------tagggtaggctcttaacccagtttggttggtgcctttacaagaaaaggagaaaagacacacacacagagaataccaactgatgacagaggcagaaattagaatgataaaccaccaagctaaggaataccaaggattgttgcca-caccagaaactaagaaaggacaaggaaagattctgcccagtgactgcaggagaacattttggtgatatttcgactctggacttccagcctccagaactgtgagagaataaattactgttgtgttaagtgatgcagcatgtggtactttgttatagaaatcctagaaactaatacaacatatcaaaatgtatgggatgcccctaaaatagtacttaacgtttaatttaacctacttaatatttatacttgaaaataaaaatgatcttgtcaatgacattagcttccaaagcaggaagaggagaagg-aaaaaaataagtatcagtgcagaaatcaattatctagaaatcacaaaacaagtcaat-------gaaac i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168541212 2504 - 198365852 TGAAAGAACAACAGAAAAAAAATTTAAGAATTAAAAGACTTAAACTAAAATTGTCTACCCATTCAGTCCATCAACATATCAACAGAGAAAATAAGCCATTTTCTGATTTGCAAAGTACCAAA-TTTTGATTTTCATGTAACCTTCctcaaaaagttattgaggatgtttgctttgaaccaaaatggagtaatagaaactagatttaatctcttccttgatacaaataaaaaacagacaaaaataattgagaaagccatttgaaaaacactgaacatcaggcaacaaaggaaaatccttatattaccccagtttaccacctt--gagagtttacag-atccaaaatgagtgatgaaaaactcagatggagcccggatgctccctgagttgaggacacagagatgagactccagagagatgaag---gcaggtagagtttctaggaaagagtatcagagaggagacagctcacaggacgaaacccagagagctgcagaatgtgccccacaagtaccaatcagtgctataagtgagaagactacccaaagtagggggaaaa----------------------cacccaaaaggacggtgttaacagcatctgcttctcacacaggaatggtaaaaggaccttgtctcacccagaaatctgggaaacctttttgtttacaggcattgggtaggatacacagaaggatttcatctctagca----tacatttccagccctcttaacacaccctagaagcaaaaactcaaaggatcaatctgctttcaagtaacttgactccatgcccaaaaaaactcaagaatgtttataggaaacaaaagtgcaccggacccaaaaaaggaaaatgcataatatcca-tcaaccaatcaaaaa-ttgccagacagacaaaaagcaggaaaatatgactcattatgaagcaatagagcaatcaatattaaactgactcggaactgatacagatgttagaatcagcagacacatacatttaaaatgttattgttactatattccatatgtccagaaagtttggtcgacacatgggagatatcttttttaactcaaatcaaacatctaaagatgaagatactggagaaaaaaatgaacttgaagatataacaatagaaactatccaaatatgaaacatagtgaaaaaaagaaaatgaatttttaaaaaagcattggtagtcgtgagacaacttcaagcagcccaacatatgcgtatttagagtcttgcatggaaaggagaaagaggaggaaaaagaaaaaatatttcaataaataacctccaaaattatccaaatttgatgaaaactataaatacacagtctaaaaaaagtcaatgaaccctgagcacaaaaaaaatgaggaaaactgcctaagaatacattgtactaaaattgctaaaaaccagtgataaacagaaagtcttaaaagcagccaaagaaaaagcaaacaatgtgttctgatg-atgagacatcaagataagagcatatttttttgttggaaacaatgcaagtgaaaagacagtagagcagtatatttaaagtactaaaagaagagaaaactatgaacctcaaaatctatacctgagagata---tttttgaaaatatcaatgaaaataaaagattatttttaaagtcaaaataaagattatttccagacatacaaaagccacaggaatttatctca-----atcaacaaatAATTAAGTTGAATGAATTCCTAATATTTGAAAAC-CAAAAGATCACTTCCTACATAATTCAGAGGTCTAAAA-AAATTAAAAGAACAAATTTGAGTGTATTTTAAACAGAATAAAAATAAAAGTGTACTTTAAAAAGAATAAAAATAAAAGTGtattttaaaaagaataaaaataaaactgcaattgttatgggttaaattgtgccctcaccccaaattatgttcttactgttagcacatcaaaatgtgactttatttgagaataggatcattacaggtataatcacttaagttcagataatgtcatactgga----------tagagtaggctcttaacccagtttggttggtgcctttacaagaaaaggagaaaagacacacacacagagaataccaactgataacagaggcagaaattacaatgatgaaccaccaagctaaggaataccaacgattgctaccaccaccagaaactaagaaaggacaaggaaagattctgcccaatgactggaggagaacattttggtgatatttcggctctggaattttagcctccagaactgtgagagaataaattattgttgtgttaagtgacacagcatgtggtattttgttatagaagccctagaaactaatacaaaatatcaaaatgtatgggatgcctttaaaatagtacttaacgtttgatttaatgtacttaatatctatatttgaaaataaaaatgatcttgtcaatgacattaacttccaaagcaggaagaggaaaaggaaaaaaaataagtatcagtgcagaaatcaattatctagaaatcacaaaaaaaatcaat-------gaaac i rheMac3.chr3 I 36 C 0 s macFas5.chr3 162205281 2504 - 192294377 TGAAAGAACAACAGAAAAAAAATTTAAGAATTAAAAGACTTAAACTAAAATTGTCTACCCATTCAGTCCATCAACATATCAACAGAGAAAATAAGCCATTTTCTGATTTGCAAAGTACCAAA-TTTTGATTTTCATGTAACCTTCctcaaaaagttattgaggatgtttgctttgaaccaaaatggagtaatagaaactagatttaatctcttccttgatacaaataaaaaacagacaaaaataattgagaaagccatttgaaaaacactgaacatcaggcaacaaaggaaaatccttatattaccccagtttaccacctt--gagagtttacag-atccaaaatgagtgatgaaaaactcagatggagcccggatgctccctgagttgaggacacagagatgagactccagagagatgaag---gcaggtagagtttctaggaaagagtatcagagaggagatagctcacaggacgaaacccagagagctgcagaatgtgccccacaagtaccaatcagtgctataagtgagaagactacccaaagtagggggaaaa----------------------cacccaaaaggacggtgttaacagcatctgcttctcacacaggaatggtaaaaggaccttgtctcacccagaaatctgggaaacctttttgtttacaggcattgggtaggatacacagaaggatttcatctctagca----tacatttccagccctcttaacacaccctagaagcaaaaactcaaaggatcaatctgctttcaagtaacttgactccatgcccaaaaaaactcaagaatgtttataggaaacaaaagtgcaccggacccaaaaaaggaaaatgcataatatcca-tcaaccaatcaaaaa-ttgccagacagacaaaaagcaggaaaatatgactcattatgaagcaatagagcaatcaatattaaactgactcggaactgatacagatgttagaatcagcagacacatacatttaaaatgttattgttactatattccatatgtccagaaagtttggtcgacacatgggagatatcttttttaactcaaatcaaacatctaaagatgaagatactggagaaaaaaatgaacttgaagatataataatagaaactatccaaatatgaaacatagtgaaaaaaagaaaatgaatttttaaaaaagcattggtagtcgtgagacaacttcaagcagcccaacatatgcgtatttagagtcttgcatggaaaggagaaagaggaggaaaaagaaaaaatattttaataaataacctccaaaattatccaaatttgatgaaaactataaatacacagtctaaaaaaagtcaatgaaccctgagcacaaaaaaaatgaggaaaactgcctaagaatacattgtactaaaattgctaaaaaccagtgataaacagaaagtcttaaaagcagccaaagaaaaagcaaacaatgtgttctgatg-atgagacatcaagataagggcatatttttttgttggaaacaatgcaagtgaaaagacagtagagcagtatatttaaagtactaaaagaagagaaaactatgaacctcaaaatctatacctgagagata---tttttgaaaatatcaatgaaaataaaagattatttttaaagtcaaaataaagattatttccagacatacaaaagccacaggaatttatctca-----atcaacaaatAATTAAGTTGAATGAATTCCTAATATTTGAAAAC-CAAAAGATCACTTCCTACATAATTCAGAGGTCTAAAA-AAATTAAAAGAACAAATTTGAGTGTATTTTAAACAGAATAAAAATTAAAGTGTACTTTAAAAAGAATAAAAATAAAAGTGtattttaaaaagaataaaaataaaactgcaattgttatgggttaaattgtgccctcaccccaaattatgttcttactgttagcacatcaaaatgtgactttatttgagaataggatcattacaggtataatcacttaagttcagataatgtcatactgga----------tagagtaggctcttaacccagtttggttggtgcttttacaagaaaaggagaaaagacacacacacagagaataccaactgatgacagaggcagaaattacaatgatgaaccaccaagctaaggaataccaacgattgctaccacccccagaaactaagaaaggacaaggaaagattctgcccaatgactggaggagaacattttggtgatatttcggctctggaattttagcctccagaactgtgagagaataaattattgttgtgttaagtgacacagcatgtggtattttgttatagaagccctagaaactaatacaaaatatcaaaatgtatgggatgcctttaaaatagtacttaacgtttgatttaatgtacttaatatctatacttgaaaataaaaatgatcttgtcaatgacattaacttccaaagcaggaagaggaaaaggaaaaaaaataagtatcagtgcagaaatcaattatctagaaatcacaaaacaaatcaat-------gaaac i macFas5.chr3 I 4 C 0 s papAnu2.chr3 150888941 2508 - 180432695 TgaaagaacaacagaaaaaaaaattaagaattaaaagaCTTAAACTAAAATTGTCTACCCATTCAGTCCATCAACATATCAACAGAGAAAATAAGCCATTTTCTGATTTGCAAAGTACCAAA-TTTTGATTTTCATGTAACCTTCCTCAAAAAGTTATTGAGGATGTTTGCTTTGAACCAAAATGGAGTAATAGAAACTAGATTTAATCTCTTCCttgatacaaataaaaaacagacaaaaataattgagaaagTCATTTGAAAAACACTGAACATCAGGCAACAAAGGAAAATCCTTATATTACCCCAGTTTACCACCTT--GAGAGTTTACAG-ATCCAAAATGAGTGATGAAAAACTCAGATGGAGCCCGGATGCTCCCTGAGTTGAGGACACAGAGATGAGACTCCAGAGAGATGAAG---GCAGGTAGAGTTTCTAGGAAAGAGTACCAGAGAGGAGACAGCTCACAGGACGAAACCCAGAGAGCTGCAGAATGTGCCCCACAAGTACCGATCAGTGCTATAAGTGAGAAGACTACCCAAAGTAGGGGGAAAA----------------------CACCCAAAAGGACGGTGTTAATAGCATCTGCTTCTCACACAGGAATGGTAAAAGGACCTTTTCTCACCTAGAAATCTGGGAAACCTTTTTGTTTACAGGCATTGGGTAGGATACACAGAAGGATCTCATCTCTAGCA----TACATTTCCAGCCCTCTTAACACACCCTAGAAGCAAAAACTCAAAGGATCAATCTGCTTTCAAGTAACTTGACTCCATGCCCaaaaaaaCTCAAGAATGTTTATAGGAAACAAAAGTGCACCGGacccaaaaaaggaaaatgcataaTATCCA-TCAACCAATCAAAAA-TTGCCAGACAgacaaaaagcaggaaaatatgacTCATTATGAAGCAATAGAGCAATCAATATTAAACTGACTCGGAACTGATACAGATGTTAGAATCAGCAGacacatacatttaaaatgttattgttaCTATATTCCATATGTCCAGAAAGTTTGGTCGACACATGGGAGATATCTTTTTTAACTCAAATCAAACATCTAAAGATGAAGAtactggagaaaaaaatgaacttgaagatataataatagaaactatccaaataTGAAAcatagtgaaaaaaagaaaatgaatttttaaaaaagcattggTAGTCGTGAGACAACTTCAAGCAGCCCAACATATGCGTATTTAGAGTCTTGcatggaaaggagaaagaggaggaaaaagaaaaaatattttaataaataacctccaaaattatccaaatttgatgaaaactataaatacACAGTCTaaaaaaaGTCAATGAACCCTGAGcacaaaaaaaatgaggaaaactgCCTAAGAATACATTGTACTAAAATTGCTAAAAACCAGTGGTAAACAGAAAGtcttaaaagcagccaaagaaaaagcaaacagtaTGTTCTGATG-ATGAGACATCAAGATAAGAGCATAtttttttGTTGGAAACAATGCAAGTGAAAAGACGGTAGAGCAGTACatttaaagtactaaaagaagagaaaactatgAACCTCAAAATCTATACCTGagagata---tttttgaaaatatcaatgaaaataaaagattatttttaaagtcaaaataaagattatttcCAGACATACAAAAGCCACAGGAATTTATCTCAAACATATCAACAAATAATTAAGTTGAATGAATTCCtaatatttgaaaac-caaaagATCACTTCCTACATAATTCAGaggtctaaaa-aaattaaaagaacaaatttgagtgtattttaaacagaataaaaataaaagtgtactttaaaaagaataaaaataaaagtgtattttaaaaagaataaaaataaaactgcaattgttatgggttaaattgtgCCCTCACCCCAAATTATGTTCTTACTGTTAGCACAtcaaaatgtgactttatttgagAATAGGATCATTACAGGTATAATCACTTAAGTTCAGATAATGTCATACTGGA----------TAGAGTAGGCTCTTAACCCAGTTTGGTTGGTGCCTTtacaagaaaaggagaaaagacatacacacagagaatACCAACtgatgacagaggcagaaatTACAATGATGAACCACCAAGCTAAGGAATACCAACGATTGCTACCACCACCAGAAACTAAGAAAGGACAAGGAAAGATTCTGCCCAATGACTGGAGGAGAACATTTTGGTGATATTTCAGCTCTGGaattttagcctccagaactgtgagagaataaattattGTTGTGTTAAGTGACAcagcatgtggtattttgttatagaagccctagaaactaatacaaaatatcaaaatgtatggGATGCCTTTAAAATAGTACTTAACGTTTGATTTAATGTACTTAATATctatacttgaaaataaaaatgatcttcTCAATGACATTAACTTCCAaagcaggaagaggaaaagg-aaaaaaataagtatcagTGCAGAAATCAATTATCTAGAAATCACAAAACAAATCAAT-------GAAAC i papAnu2.chr3 I 4 C 0 s chlSab2.chr2 14989728 2476 - 90373283 TGAAAGAACAATAGAAAAAAAATTTAAGAATTAAAAGACTTaaactaaaattgtctacccattcagtccatcaacatatcaacagagaaaataagccattttcagatttgcaaagtaccaaa-ttttgattttcatgtaaccttcctcaaaaagttattgaggatgtttactttgaaccaaaatggagtaatagaaactagatttaatctcttccttgacacaaataaaaaacagacaaaaataattgagaaagccatttgaaagacactgaacatcaggcaacaaaggaaaatccttatattaccccagtttaccacctt--gagagtttacag-atctaaaatgagtaatgaaaaactcagatggagcccggatgctccctgagttgaggacacagagatgagactccagagagatgaag---gcaggtagagtttctaggaaagagtaccagagaggagagagctcacagggcgaaacccagagagctgcagaatgtgccccacaagtaccgatcagtgctataagtgagaagactacccaaagtagggggaaaa----------------------cacccaaaaggacggtgttaacagcatctgcttctcacacaggaatggtaaaaggaccttgtctcacccagaaatctgggaaacctttttgtttacaagcattgggtaggatacacagaaggatctcatctctagca----tacatttccagccctcttaacacatcctagaagcaaaaactcaaaggatcaatctgctttcaagtaacttgactccatgcccaaaaaaactcaagaatgtttataggaaacaaaagtgcaccggacccaaaaaaggaaaatgcataatatcca-tcaaccaatcaaaaa-ttcccagacagacaaaaagcaggaaaatatgactcattatgaagaaatagagcaatcaatattaaactgactcggaactgatacagatgttagaatcagcagacacatacatttaaaatattattgttactatattccatatgtccagaaagtttggtcgacacatgggagatatcttttttaactcaaatcaaacatctaaagatgaagatactggag-aaaaaatgaacttgaagatataataatagaaactatccaaatatgaatcatagagaaaaaaagaaaatgaatttttaaaaaagcattggtagtcgtgagacaacttcaagcagcccaacatatgcgtatttagagtcttgcatggaaaggagaaagaggaggaaaaagaaaaaatattttaataaataacctccaaaactatccaaatttgatgaaaaccataaatacacagtctaaaaaaagtcaatgaaccctgagcacaaaaaaaatgaggaaaactgcctaagaatacattgtactaaaattgctaaaaaccagtgataaacagaaagtcttaaaagcagccaaagaaaaagcaaacaatgtgttctgatg-acgagacatcaagataagagcatatttttttgttggaaacaatgcaagtgaaaagacagtagagcagtatatttaaagtactaaaagaagagaaaactatcagcctcaaaatctatacctgagagata---tctttgaaaatatcaatgaaaataaaagataattttcacagtcaaaataaatattatttccagacatacaaaagccacaggaatttatctcaaacatatcAACAAATAATTAAGTTGAATGAATTCCTAATATTTGAAAAC-CAAAAGATCACTTCCTAAATAATTCAGAGGTCTAAAA-AAATTAAAAGAACAAATTTGAGTGTATTTTAAAC----------------------------AGAATAAAAATAAAAGTGtattttaaaaagaataaaaataaaactgcaattgttatgggttaaattgtgccctcaccccaaattttgttcttactgttagcacatcaaaatgtgactttatttgagaataggatcattacaggtataatcacttaagttcagataatgtcatactgga----------tagagtaagctcttaacccagtttggttggtgcctttacaagaaaacaagaaaagacacacacacagagaataccaactgatgacagaggcagaaattataatgatgaaccaccaagataaggaataccaatgattgctaccaccaccagaaactaagaaaggacaaggaaagattctgcccaatgactggaggagaacattttggtgatatttcgactctggaattttagcctccagaactgtgagagaataaatta---ttgtgttaagtgacacagcatgtggtactttgttatagaagccctagaaactaatacaaaatatcaaaatgtatgggatgcccttaaaatagtacttaacatttaatttaatgtacttaatatctatacttgaaaataaaaatgatcttgtcaatgacattagcttccaAAGCAGGAAGAGGAAAACG-AAAAAAATAAGTATCAGGGCAGAAATCAATTATCTAGAAAGTACAAAACAAATCAAT-------GAAAC i chlSab2.chr2 I 36 C 0 s calJac3.chr21 21921418 2397 + 50472720 TGAAAGAAAAATAGAAAAAATTCTTAAG------AAGACTTAAACCAAAATTACCTGCCCATTCAGTTCATCAACATATCAATAGAGAAAAAAAGGCATTTTCATATTTGAAATGTACTAAA-TTTTAGTTTTCATGTAACCTTTCTCAAACAG---TTGAGGATGTTTACATTGAgccaaaatggaataatagaaattagatttactctcttccttgatgccaataaaaagcagaaaaaaataattaagaaagccatttaatagacactgaacatcaggcaataaaggtaaatcctaatattaccccagtttaccaccctgagagagtttacagaacccaaaatgagtgaagaaaaactcagatggag-ctggaggctctctgtgttggggacacagagatgagactccagggagatgaag---gcagct-gaatttctaggaatgagtaccagagaggagagagctcacaggaagaaacccaaagagctgcagagtgtgccccacaactactgatcagtgctataagtgagaagactacccaaagtagcaggaaaaa---------------------cacccaaaagggcagtgttaacagcatatgcttctcacacagggatggtaagagg-cctcttctcacccagcaatctgggaaaccgctttgttt-----ctgttgacagg---cacagaagaatctcatctctagagagtatacttctccagccctcttaacacatcctagaatcaaaaactcaaaggatcaatctgctttcaagtaacttgattccatgcccaaaaaagctagagaatattcataggaaacaaaagtgcaccaaacccaacaaaggaaaatgcataatatccattcaaccaatcaaaaa-ttgccag--aaaaaaaaaacagaaaaatatgactcattatgaagcattagagcaatcaata-taaaccatcccagagctgatacagatgttagaattagcagacacatatatttaaaatgttattgttactatattccatatgtccagaagtttgagtagacacctgggagatgtc-tttgtaacttaaatcaaacatttgaagatgaagatactggag-aaaaaatgaacttgaagatgtaaaaattgaaactatcc-aatataaaacatagaggacaa---aaaatgaa-ttttaaaagagcattaggagctgtgagacaacttcaagcaacccaacctatgtg--tttagagtcttccattgagaagag--------gaaaaaggaaaaaatattttaatagataacctcccaaactatccaaatttgatgaaaactataaatccactttct-aaaaagtacaatgaaccctcagcacaaaaaatatgaagaaaagtgcataagaatacatcataataaaattgctaaaaaccagtaataaacagaaagtcttaaaagcagcca------------------tgtacagatgaaagaaacatcaagctaacagcaca-gtctttgttggtaacaatgcaagtaaaaagacaatagagtaatatatttaaagtactaaaggaagagaaaactgtcaactccaaaagctatgcctgataaataatgtatgtgaaaatatcaaggaaagtaaaagatcattttcaaagtcaaaata------attttcagatatac-aaagccacaggaatttatctcaaacataccagcaAATAATTAAATTCAACAAATTCCTAATATTTGAGAAA-AAAA-----ACTTTCTAAATAATTCATGGCCCTAAAA-TAATTGAAAGAACAAATTAGAGTATATTTTAAAT----------------------------GGAATAAAAATAAAAGtg---------------------------------------ggttgaattgtgccctcaccccaaatcatgttcttacccttcacacaccaaaatgtgactttatttgaaaataggatcattacaggtataatcactgaagtcaagataaggtcatagtggatatggttgggtagcgtaggctcttaattcagtttggttggtgcctttacaagaaaaggagaaaagacacacacagagagaataccaactgacgacagaagcagaaattagaatgttgaaccaccaagctaaggaataccaaggattgctaccaccaccagaaactaagaaagggcaaggaaagattctgctcagcaactgcagaaggacactttgttgatagtttgactctggacttctagcctccagaactgtgagagaataaatttctgctgtattaagccatgcagtgtgtggtactttgttacagaagctctagaaactaatacaacatatcgaaatgtattggatgcccttacaatagtacttaatggttaatttaaagcacttaatatttatatttgaaaataaaaatgatcttgtcaacgacattagcttccaaagcaggaagaggaaaagg-aaaaaaata--tatcagtgcagaaatcaattatctagaaattatgaaacaagccaatgaaacccaaaac i calJac3.chr21 C 0 I 1410 e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I a score=14322.000000 s hg38.chr21_KI270874v1_alt 56862 7 + 166743 CCAAAAC------- s panTro4.chr21 3669712 7 + 32799110 CCAAAAC------- i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16921999 7 + 48394510 ccaaaaC------- i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4430292 7 + 32716333 ccaaaac------- i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168543716 14 - 198365852 ccaaaacTCAAAAC i rheMac3.chr3 C 0 I 4872 s macFas5.chr3 162207785 7 - 192294377 ccaaaac------- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150891449 7 - 180432695 CCAAAac------- i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14992204 7 - 90373283 CCAAAAC------- i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21923815 1410 + 50472720 I e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I a score=4155136.000000 s hg38.chr21_KI270874v1_alt 56869 2358 + 166743 Tcaaaacagcatggtactggtaccaaaacagatatatagaccaatggaacagaacagaggccccagaaataacaccacacatctacaaccatctgatgtttgacaaacctgataaatacaagcaatggggaaaggattccctatttaataaatggtgatgggaaaactggctagccatatgcagaaaactgaaactggatcccttccttaaaccttacacaaaaattaactcaagatggattaaagacttaaatgtaagacgtaaaaccataaaaaccttagaacaaaacctaggcaataccattcaagacataggcatgggcaaggacttcatgtctaaaacaccaaaagcaatggcaacaaaaaccaaaatagacaaatgggatctaattaaactgaagagcttctgcacagcaaaagaaactatcatcagagtgaacaggcaacctagagattgggagaaaacttttgcaatctatccacctaacaaa-ggctaatatccagaatctacaaagaacttaaacaaatttacaagaaaaaaacaaacaact-tcatcaaaaaatgggtgaaggatatgagcagacacctctcaattgaagacatttatgcagccaacaaacttacgaaaaaatgctcatcatcactggtcattagagaaatgcaaatcaaaaccacaatgagataccgtctcacaccagttagaatggcaatcattaaaaagtcaggaaacaacagatactggagaggatgtggagaaataggaatgcttttacactgttggtaggagtgtaaattagttcaaccattgtggaagacagtgtggtgattcctcaaggacctagaataagaaataccatttgacccagcaatcccattactgggtatatacccaaaggattataaatcattctactgcaaggacagatgcacacgtatgattattgcagcactgttc---------acaatagcaaagtcttggaaccaacccaaatgcccatcaatgatagactggattaagaaaatgtggcacatatacatcatggaatactatgcagtcataaaaaaggatgagttcatgtcctttgcagggacatggatgaaactggaaaccatcattctcagcaaagtaacacaggaacagaaaaccaaacaccgcatgttctcactcataagtgacagctgaacaatgagaacacatggacacagggaggggagcatcacacgctggggcctgtcagagggtggggggct-gggggagggatagcattaggagaaatagctaatgtaaatgacgagttgatgggtgcaagaaaccagcacggcacatgtatacctatgtaacaaacctgcatgttatgcatatgtacctcagaatttaaagtataatttaa------aaaagaaGAGGAAAGAAAATTTACATtctagccagactgatcag-aaaaaaaaacaatgaaagagaagacacaagttaccaacataaaaaatgagagaggtagcaccactataaattctatgaatatttaaagaataataagaaaacattgtgaacatatttgtggcaacaaattgaccaatttagatgaaatgaaagattcaatattattgagatgtgtattctccccagtttatagattcaacacaatcccaatcaaaatcctagcaaggctgtagaaacttacaagctgattctaaaatttatatggaaatgcaaataatctaaaatactcaaaacaaccttgaataaaaagccaaaataggagaattgacactacacatgatatgaagattcatgataaagccatagtaatcaagatgatgctattggcatcacacaagataaacatgtagatcaatgaaacaaaaagtgctcagaaataagttcacacgtgtatggacaatgactttcaacaaagatgcaaaggcacaattaattggaaaaggacagtcttttcaaaaagagtactggaaaaatttaatttccatatggaataaacaaactttgatccatatctcacactgtataaaaaattaattcaaaatagattatgcatttaaatgtaaaatctataagaagtataaaaacttctagaatacagcataggagaaaatttaggtgactgagttaaacaaggttttattacttactatacaaaaagaacaatttataaaagaacatgtgttagtccatt-ttcatgctgctgataaagacatacccaagactgggcaatttacaaaagaaagaggtttaattggactcacagttccacatggctggggaggcttcaaaatcatggtggaaggcaaggaggagc-aaattatgtcttatgtggatggcggcaggcatagagagcgagcttgttcagggga s panTro4.chr21 3669719 2358 + 32799110 Tcaaaacagcatggtactggtaccaaaacagatatatagaccaatggaacagaacagaggccccagaaataacaccacacatctacaaccatctgatgtttgacaaacctgataaatacaagcaatggggaaaggattccctatttaataaatggtgacgggaaaactggctagccatatgcagaaaactgaaactggatcccttccttaaaccttacacaaaaattaactcaagatggattaaagacttaaatgtaagacgtaaaaccataaaaaccttagaacaaaacctaggcaataccattcaagacataggcatgggcaaggacttcatgtctaaaacaccaaaagcaatggcaacaaaaaccaaaatagacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactatcatcagagtgaacaggcaacctagagattgggagaaaatttttgcaatctatccacctaacaaa-ggctaatatccagaatctacaaagaacttaaacaaatttacaagaaaaaaacaaacaact-ccatcaaaaaatgggtgaaggatataagcagacacctctcaattgaagacatttatgcagccaacaaacttacgaaaaaatgctcatcatcactggtcattagagaaatgcaaatcaaaaccacaatgagataccgtctcacaccagttagaatggcaatcattaaaaagtcaggaaacaacagatactggagaggatgtggagaaataggaatgcttttacactgttggtaggagtgtaaattagttcaaccattgtggaagacagtgtggtgattcctcaaggacctagaacaagaaataccatttgacccagcaatcccattactgggtatatacccaaaggattataaatcattctactgcaaggacagatgcacacatatgattattgcagcactgttc---------acaatagcaaagtcttggaaccaacccaaatgcccatcaatgatagactggattaagaaaatgtggcacatatacatcatggaatactatgcagtcataaaaaaggatgagttcatgttctttgcagggacatggatgaaactggaaaccatcattctcagcaaagtaacacaggaacagaaaaccaaacaccgcatgttctcactcataagtgacagctgaacaatgagaacacatggacacagtgaggggaacatcacacgctggggcctgtcagagggtggggggct-gggggagggatagcattaggagaaatagctaatgtaaatgacgagttgatgggtgcaacaaaccagcacggcacatgtatacctatgtaacaaacctgcatgttatgcatatgtaccccagaatttaaagtataatttaa------aaaagaaGAGGAAAGAAAATTTACATtctagccagactgatcag-aaaaaaaaacaatgaaagagaagacacaagttaccaacataaaaaataagagaggtagcaccactataaattctatgaatatttaaagaataataagaaaacattgtgaacatatttgtggcaacaaattgaccaatttagatgaaatgaaagattcaatattattgagatgtgtattctccccagtttatagattcaacacaatcccaatcaaaatcctagcaaggttgtagaaacttacaagctgattctaaaatttatatggaaatgcaaataatctataatactcaaaacaaccttaaataaaaagccaaaataggagaattgacactacacatgatatgaagattcatgataaagctatagtaatcaagatgatgctattggcatcacacaagataaacatgtagatcaatgaaacaaaaagtgctcagaaataagttcacacgtgtatggacaatgactttcaacaaagatgcaaaggcacaattaattggaaaaggacagtcttttcaaaaagaatactggaaaaatttaatttccatatggaataaacaaactttgatccatatctcacactgtataaaaaattaattcaaaatagattatacatttaaatgtaaaatctataagaagtataaaaacttctagaatacagcataggagaaaatttaggtgactgagttaaacaaggttttattacttactatacaaaaagaacaatttataaaagaacatgtgttagtccatt-ttcatgctgctgataaagacatacccaagactgggcaatttacaaaagaaagaggtttaattggactcacagttccacatggctggggaggcttcaaaatcatggtggaaggcaaggaggagc-aaattatgtcttatgtggatggcggcaggcatagagagcgagcttgttcagggga i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16922006 2358 + 48394510 Tcaaaacagcatggtactggtaccaaaacagatatatagaccaatggaacagaacagaggcctcagaaataacaccacacatctacaaccatctgatgtttgacaaacctgataaatacaagcaatggggaaagaattccctatttaataaacggtgatgggaaaactggctagccatatgcagaaaactgaaactgcatcctttccttaaaccttatacaaaaattaactcaagatggattaaagacttaaatgtaagacctaaaaccataaaaaccctagaagaaaacctaggcaataccattcaagacataggcatgggcaaggacttcatgtctaaaacaccaaaagcaatggcaacaaaagccaaaatagacaaatgggatctaattaaactgaagagcttctgcacagcaaaagaaactattatcagagtgaacaggcaacctagagactgggagaaaatttttgcaatctatccacttaacaaagggctaatatccagaatctataaagaacttaaacaaatttacaagaaaaaaacaaacaact-ccatcaaaaagtgggtgaaggatatgaacagacacctctcaaatgaagacatttatgcagccaacaaacttacgaaaaagtgcccatcatcactggtcattagagaaatgcaaattaaaaccacaatgagataccgtctcacaccagttagaatggcgatcattaaaaagtcaggaaacaacagatactggagaggatgtggagaaataggaatgcttttacactgttggtaggagtgtaaattagttcaaccattgtgaaagacagtgtggtgattcctcaaggacctagaacaagaaataccatttgacccagcaatcccattactgggtatatacccaaagtattataagtcattctactacaaggacagatgcacacgtatgattattgcagcactgttc---------acaatagcaaagtcgtggaaccaacccaaatgcccatcaatgatagactggattaagaaaatgtggcacatatacagcatggaatactatgcagtcataaaaaaggatgagttcatgtcctttgcagggacatggatgaaactggaaaccattattctcagcaaagtaacacaggaacagaaaaccaaacagcacatgttct--ctcataagtgaaagctgaacaacgagaacacatggacacagggaggggaacatcacacactggggcctgtcagagggtggggggct-gggggagggattgcattaggagaaatacctaatgtaaatgatgagttgatgggtgcaacaaaccagcacggcacatgtatacctatgtaagaaacctgcatgttatgcacatgtactccagaatttaaagtataatttaa------aaaagaaGAGGAAAGAAAATTTACATtctagccagactgatcag-aaaaaaaaacaatgaaagagaagacacaagttaccaatatcaaaaatgagggaggtagcaccactataaattctatgaatatttaaagaataataagaaaacattgtgaacatatttatggcaacaaattgaccaatttagatgaaatgaaagattcagtattattgagatgtgtattctccccagtttatagattcaacacaatcccaatcaaaatcctagcaaggttgtagaaacttacaagctgattctaaaatttatatggaaatgcaaataatctaaaatactccaaacaaccttgaataaaaagccaaagtaggagaattgacactacacatgatatgaagattcatgataaagctacagtaatcaagatgattctactggcatcacacaagatagacatgtagatcaatgaaacaaaaagcattcagaaataagttcacacatgtatggacaatgaatttcaacaaagatggaaaggcagaattaattggaaaaggacagtcttttcaaaaagagtactggaaacatttaatttccatatggaataaacaaactttgatccatatctcacactgtataaaaaattaattcaaaatggattatacatttaaatgtaaaatctataagaagtataaaaacttctagaatacagcataggagaaaatttaggtgactgagttaaacaaggttttattacttactatacaaaaagaacaatttataaaagaacatgtgttagtccatt-ttcatgctgctgataaagacatacccaagcctgagcaatttacaaaagaaagaggtttaattggactcacagttccacttggcttgggaggcttaaaaatcatggtggaaggcaaggatgagcaaaattacatcttatgtggatggcggcaggcatagagagcgagcttgttcagggga i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4430299 2359 + 32716333 Tcaaaacagcatgatactggtgccaaaacagatatatagatcaatggaacagaacagaggcctcagaaataacaccacacatctacaaccatctgatgtttgacaaacctgataaatacaagcaatgggtaaaggattccctatttaataaatggtgatgggaaaactggctagccatatgcagaaaactgaaactggatcccttccttacaccttatacaaaaattaactcaagatggattaaagacttaaatataagacctaaaacaat-aaaaccctagaagaaaacctaggcaatatcattcaagacataggcatgggcaaggacttcctgtctaaaacaccaaaagcaatggcaacaaaagccaaaatagacaaatgggatctaattaaactaaagagcttttgcacagcaaaagaaactatcatcagagtgaacaggcaacctagagattgggagaaaatttttgcaatctatccacctaacaaagggctaatatccagaatctacaaagaacttaaacaaatttacaagaaaa----aaacaact-ccatcaaaaaatgggtgaagggtatgaacagacacctctcaaatgaagacatttatgcagccaacaaacttacgaaaaaatgctcatcgtcactggtcattagagaaatgcaaatcaaaaccacaatgagataccgtcttacaccagttagaatggcgatcattaaaaagtcaggaaacaacagatactggagagcatgtggagaaataggaatgcttttacactgttggtaggagtgtaaattagttcaaccattgtggaagacagtgtggtgactcctcaaggacctagaaccagaaataccatttgacccagcaatctcattactgggtatatacccaaaggattataaatccttctactacaaagacagatgcacacatatgactactgcagcactgccttggaaccaaccaatagcaaagtcttggaaccaacccaaatgcccatcaatgatagactcaattaagaaaatgtggtacatatacaccatggaatactatgcagtcataaaaaaggatgagttcatgtcctttgcagggacatggatgaaactggaaaccatcattctcagcaaagtaacacgggaacagaaaaccaaacactgcatgttctcactcataagtgagaaccgaacaataagaacacatggacacactgaagggaacatcacacactggggcctgtcagagggtgggggcctggggggagggatagcatcaggagaaatacctaatgtaaatgatgagttgatggatgcaacaaaccagcacagcacatgtatacctatgtaacaaacctgcatgttacacacatgtaccccagaatttaaagtataatttaa------aaaagaaGAGGAAAGAAAATTGTCATtctagccacactgatcagaaaaaaaaaacaatgaaagagaagacacaagttaccaatatcaaaaatgagagaggtagcatcactataaattcgatgaatatttaaagaat-ataagaaaacattgtcaacatatttatggcaacaaattgaccaatttagatgaaatgaaagattcaatactgttgagatgtgtattctccccagtttacagattcaacacaatcccagtcaaaatcctagcaaggttgtagaaacttacaagctgattctaaaattcatatggaaatgcaaataatc------actcaaaacaaccttgaataaaaagccaaagtaggagaactgatactatacatcatatgaagactcatgagaaagctatagtaatcaagatgacgctattggcatcatacaagatagacatggagatcaatgaaacaaaaagcgctcagaaataagttcacacatgtatggacaatgagtttcaacaaagacccaaaggcagaattcattggaaaaggacagtcttttcaaaaagagtactggaaaaatttaatttccatatggaataaacaaactttgatccatatctcacactgtataaaaaattaattcaaaatggattatacatttaaatgtaaaatctataagaagtaaaaaaacttctagaatacatcataggagaaaatttaggtgactgagttaaacaaggttttattatttactatacaaaaagaacaacttataaaagaacatgtgttagtccattctccatgctgctaataaagacatacctaagactgggcgatttataaaagaaagaggtttaattggactcacagttccacatggctggggaggcttcaaaatcatggtggaaggcaaggaggagc-aaattacatcttatgtggatggcggcaggcatagagagcgagcttgttcagggga i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162207792 2353 - 192294377 Tcaaaacagtgtggtactggtaccaaaacagatatatggaccaatggaacagaacagaggtctcggaaataacaccacacatctacaaccatctgatctttgacaaacctgacaaaaacaagcagtggggaaaggattccctatttaataaatggtgatgggaaaactggctagccatatgcagaaaactgaaactggatcccttccttaaaccttatacaaaaattaactcaagatggattaaagacttaaatgtaagacctaaaaccataaaaaccctagaagaaaacttaggcaataccattcaagacaaaggcatgggcaaagacttcatgactaaaacatcaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctacagaatgggagaaaatttttgcaacctactcatctgacaaagggctaatatccagaacctacaaagaactcaaacaaatttacaagaaaaaaacaaacaacc-ccatcaaaaagtgggcaaaggacatgaacagacatttctcaaaagaagacattcatacagccaacagacacatgaaaaaatgctcatcatcactggccatcagagaaatgcaaatcaaaaccaccatgagataccatctcacaccagtt----tggtgatcattaaaatgtcaggaaacaacagatgctggagaggatgtggagaaataggaatgcttttacactgttggtgggagtgtaaattagttcaaccattgtggaagacagtgtggtgattcctcaaggacctagaaccagaaatactatctgaccaagcaatcccattactgggaatatacccaaaggaatataaatcattgtactacaaagacagatg--cacttatgattattgcagcactgttc---------acaatagcaaagtcctggaaccaacccaaatgcccatcaatgataagctggattaagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaaagatgagttcatgtactttgcagggacatggatgaagctggaaatcatcattctcagcaaagtaacacgggaacagaaaaccaaacaccacatgttctcactcataagtgagagttgaacaatgagaacacatggacacagggaggggaacatcacacactggggcctgtcagagggtagggggct-ggagaagggatagcattaggaaaaatacctaatgtaaatgacaagttgatgggtgcaacaaaccaacatggcacatgtatacctatgtaacaaactggcatgttgtgcacatgtaccccagaatttaaagtataatttaaaaaaagaaAAGgaaaggaaagaaaactgacattctagccagactggtcag---aaaaaaacaatgaaagagaagacacaagttaccaatatcaaacatgagagaggtaacatcactataaattctatgaatatttaaagaataataataaaacattgtgaacatatttatggcaacaaattgaccaatttagatgaaatgaaagattcaatattattgagatgaggtttcttcccagtttacagattcaacacaatcccaatcaaaatcctagcaaggttgtagaaacttacaagctgattctaaaatttatatggaaatgcaaataatctaaaatactcaaaacaaccttgaataaaaagccaaagtaggagga-taacactacatgtgatatgaagactcatgataaagctatagcaatcaagatgatgctattggcatcacacaagatagacatgtagatcaatgaaacaaaaagagctcaggaataagttcccacatgtatggacaatgagtttcaacaaagatgcaaaggcagaattgattggaaaaggacagtcttttcaaaaagggtactggaaaaattgaatttccatatggaataaacaaactttgatctatatctcacactgtataaaaaactaattcaaaatggattatacatttaaatgtaaaatctat---aagtataaaaacttctagaatacagcataggagaaaatttaggtgactgagttaaaccaggttttattatttactatacaaaaagaacaacttataaaagaacatgtgttagtccatt-ttcatgctactgataaagacatacccaagactgggcaacttacaaaagaaagaggtttaattggactcacagttccagatggctggggaggcttcacaatcatgatggaaggcaagaaggagc-aaattaaattttatgtggatggcagcaggcaaagacagcgagcttgttcagggga i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150891456 2359 - 180432695 tcaaaacagtgtggtactggtaccaaaacagatatatggaccaatggaacagaacagaggtctcggaaataacaccacacatctacaaccatctgatctttgacaaacctgacaaaaacaagcagtggggaaaggattccctatttaatatatggtgatgggaaaactggctagccatatgcagaaaactgaaactggatcccttccttaaaccttatacaaaaattaactcaagatggattaaagacttaaatgtaagacctaaaaccataaaaaccctagaagaaaacttaggcaataccattcaagacaaaggcatgggcaaagacttcatgactaaaacatcaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactatcatcagagtgaacaggcaacctacagattgggagaaaatttttgcaatctattcatctaacaaaggactaatatccagaatctacaaagaacgcaaacaaatttacaagaaaaaaaaaaaaaacctccatcaaaaaatgggtgaaggatatgaacagacacttctcaaatgaagacatttatgcagccaacaaacttacaaaaaaatgctcatcatcactggtcattagaggaatgcaaatcaaaaccaccatgagataccatctcacaccagttagaatggtgatcattaaaatgtcaggaaacaacagatgctggagaggatgtggagaaataggaatgcttttacactgttggtgggagtgtaaattagttcaaccattgtggaaggcagtgtggtgattcctcaaggacctagaaccagaaataccatctgaccaagcaatcccattactgggaatatacccaaaggaatataaatcattgtactacAAAGACAGATG--CACTTATgattattgcagcactgttc---------acaatagcaaagtcttggaaccaacccaaatgcccatcaatgataagctggattaagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaaagatgagttcatgtactttgcagggacatggataaagctggaaatcatcattctcagcaaagtaacacgggaacagaaaaccaaacaccacatgttctcactcataagtgagagttgaacaatgagaacacatggacacagggaggggaacatcacacactagggcctgtcagagggtagggggct-ggagaagggatagcattaggaaaaatacctaatgtaaatgacgagttgatgggtgcaacaaaccaacatggcacgtgtatacctatgtaacaaactggcatgttgtgcacatgtaccccagaatttaaagtataattttaaaaaagaaaaggaaaggaaagaaaaccgaCATTCTAGCCAGACTGgtcag---aaaaaaacaatgaaagagaagacacaaGTTACCAATATCAAACATGAGAGAGGTAACATCACTATAAATTCtatgaatatttaaagaataataataaaacattgtgAACATATTTATGGCAACAAATTGAccaatttagatgaaatgaaaGATTCAATATTATTGAGATGTGGTTTCTTCCCagtttacagattcaacacaatcccaagCAAAATCCTAGCAAGGTTGTAGAAACttacaagctgattctaaaatttacatggaaatgcaaataatCTAAAATACTCAAAACAACCTTGAATAAAaagccaaagtaggaggattAACACTACATGTGATATGAAGACTCGTAATAAAGCTATAGCAATCAAGATGATGCTATTGGCATCACACAAGATAGACAtgtagatcaatgaaacaaaaagagcTCAGGAATAAGTTCCCATATGTATGGACAATGAGTTTCAACAAAGATGCAAAGGCAGAATTGATTGGAAAAGGTCAGTCTTTTCAAAAAGGGTACTGGAAAAATTTAATTTCCGTATGGAATAAATAAACTTTGATCCATATCTCACACTGTATACAAAactaattcaaaatggattatacatttaaatgtaaaatctat---aaGTATAAAAACTTCTAGAATACAGCATAGGAGAAAATTTAGGTGACTGAGTTAAACCaggttttattatttactatacaAAAAGAACAACTTATAAAAGAAcatgtgttagttcatt-ttcatgctactgataaagacatacccaagactgggcaatttacaaaagaaagaggtttaattggactcacagttccagatggctggggaggcttcacaatcatggtggaaggcaagaaggagg-aacttacatcttatgtggatggcagcaggcaaagacagtGAGCTTGTTCAGGGga i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14992211 2336 - 90373283 Tcaaaacagtgtggtactggtaccaaagcagatatatggaccaatggaacagaacagaggtttcggaaacaacaccacacatctacaaccatctgatctttgacaaacctgacaaaaataagcaatggggaaaggattccctatttaataaatggtgatgggaaaactggctagctatatgcagaaagctgaaactggatcccttccttaaaccttatacaaaaattaactcaagatggattaaagacttaaatgtaagacctaaaaccataaaaaccctagaagaaaacttaggcaataccattcaagacataggcatgggcaaagacttcatgactaaaacaccaaaaacaatggcaaccaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaacaatcatcagagtgaacaggcaacctacagattgggagaaaatttttgcaatctgtccatctaacaaaggactaatatccagaatctacaaagaacttaaacaaatttacaagaaaa------------------aaaaaatgggtgaaggatgtgaacagacacttctcaaatgaagacatttatgcagccaacaaacttacaaaaaaatgctcatcatca---gccattagagaaatgcaaatcaaaactacgatgagataccatctcacaccagttagaatggcgatcattaaaatgtcaggaaacaacagatgctggagaggatgtggagaaataggaatgcttttacactgttggtgggagtgtaaattagttcaaccattgtggaagacagtgtggtgattcctcaaggacctagaaccagaaataccatttgacccagcaatcccattactgggaatatacccaaaggattataaatcattgtactacaaagacagatg--caattatgattattgcagcactgttc---------acaatagcaaagtcttggaaccaacccaaatgcccatcaatgataagctggattaagaaaatgtggcacatatacaccatggaatgctatgcagccataaaaaaggatgagttcatgtactttgcagggacatggatgaagctggaaatcatcattctcagcaaagtaacacaggaacagaaaaccaaacactgcatattctcattcataagtgagagctgaacaatgagaacacatggacatagggaggggaacatcatacactggggcctgtcagagggtggggggct-ggggaagggatagcattaggagaaatatctaatgtaaatgacgaattggtaggtgcaacaaaccaacatggcacatgtatacctatgtaacaaactggcatgttgtgcacatgtaccccagaatttaaagtataatttaaaaaaagaaAAGgaaaggaaagaaaatcgacattctagccagactgctcag----aaaaaacaatgaaagagaagacacaagttaccaatatcaaaaatgagagaggtaacatcactataaattctatgaatatttaaagaataataataaaaaattgcgaacatatttgtggcaacaaattgaccaacttagatgaaatgaaagattcaatattattgagatgtgttttcttcccagtttacagattcaacacaatcccaatcaaaatcctagcaaggttgtagaaacttacaagctgattctaaaatttatatggaaatgcaaataatctaaaatactcaaaacaaccttgaataaaaagccaaagtgggaggattaacactacacgtgatatggagactcatgataaagctatagcaatcaagatgatgctatgggcatcacacaagatagacatgtagatcaatgaaacaaaaagagttcaggaataagttcccacatgtatggacaacgaatttcaacaaagatgcaaaggcagaattgattggaaaacgacagtc-tttcaaaaagggtaccgggaaaatttaatttccgtatggaataaacaaactttgatccatatctcacacagtatacaaaactaattcaaaatggattatacatttaaatgtaaaatctgt---aagtataaaaacttctagaatacagcataggagaaaatttaggtgactgagttaaaccaggttttattatttactgtacaaaaagaacaacttataaaagaacatgtgttagtccatt-ttcatgctactgataaagacatacccaagaatgggcaatttacaaaagaaagaggtttaattggactcacagttccagatggctggggaggcttcacaatcatgatggaaggcaagaaggagc-aaatgaaattttatgtggatggcagcaggcaaagacagcaagcttgttcagggga i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21923815 1410 + 50472720 I e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I e rheMac3.chr3 168543730 4872 - 198365852 I a score=843632.000000 s hg38.chr21_KI270874v1_alt 59227 389 + 166743 actcccatttttaaaaaacatcagatctca-gagactcactcaccatcacaggaacaacacaggaaagagccgcccccatgattc-----aaccacctcccgccagtttcctcccatggcatgtgagaattgtggaagttacaattcaagatgagatctgggtggggacacagccaaactatatcataacacatttataatttttacttcatcaaaacttaaaacttctgcacttcaaaaggc-tttttaaaaattttttgagacgg-------------------gactggagtgcagtggcacaatctcagctcactgcagcctccatcttctacaatcctcccaccttagcttcccaagtagctgggactacaggtgtgtaccactacatccagccaacttt------------------------------------------------------ttcttttttt s panTro4.chr21 3672077 389 + 32799110 actcccatttttaaaaaacatcagatctca-gagactcactcaccatcacaggaacagcacaggaaagacccgcccccatgattc-----aaccacctcccgccagtttcctcccatggcatgtgagaattgtggaagttacaattcaagatgagatctgggtggggacacagccaaactatatcataacacatttataatttttactttatcaaaacttaaaacttctgcacttcaaaagac-tttttaaaaaTTTTTTGAGAcag-------------------gactggagtgcagtggcacaatctcagctcactgcagcctccatcttctacaatcctcccaccttagcttcccaagtagctgggactacaggtgtgtaccactacatccagccaacttt------------------------------------------------------ttcttttttt i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16924364 405 + 48394510 actcccatttttaaaaaacatcagatctca-gagactcactcaccatcataggaacagcacaggaaagacccacccgcatgatat-----aaccacctcccaccagtttcctcccatggcatgtgggaattttggacgttacaattcaagatgagatttgggtggggacacagccaaacaatatcataacacatttataatttttactttatcaaaacttaaaacttctgcacttcaaaagac-ttttttaaaattttttgagacaggatctcactctgtcacccagactggagtgcagtggcacaatctcagctcactgcagcctccaacttctacaatcctcccaccttagcttcacaagtagctgggactacaggtgtgtaccactacatccagccaacttt---------------------------------------------------------ttttttt i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4432658 462 + 32716333 actcccatttttaaaaaacatcagatctca-gaggctcactcaccatcacaggaacagcacaggaaagacccgcccccatgattc-----aaccacctcccaccagtttcctcccatggcatgtgggaagtgtggaagttacaattcaagatgagatttgggtgaggacacagccaaacaatatcatgacacatttataatttctcctttatcaaaacttaaaacttctgcacttcaaaatac-ttttttaaaattttttgagacaggatctcactctgtcacccagactgaagtgcagtggcacaatctcagctcactgcagcctccatcttctacaatcctcccaccttagcttcccaagtagctgggactatgggtgtgtaccactacatccagccaactttgggttttttttgtttcgtttttgttttgtttttttgttgttgttgctgtttgtttttttttttt i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162210145 409 - 192294377 attcccattttttaaaaccatcagatctcaagagacccactcaacatcacaggaacagcacaggaaagacctgcccccatgattc-----aaccacctcccaccaggttcctcccatggcatgtgggaacagtgggagctacaattcaagatgagatttgggtggggacacagccaaacagtatcagaacacatttataatttttactttatcaaaacttaaaacttatgcacttcaaaagac-ttttttttaattttgtaagacaggatctcactctgtcacccagactggagtgcagtggcacaatctcagctcactgcagcctccatcttctacaatcctcccaacttagcttcctaagtagctgggactacaggcgtgtaccaccacatccagccaacctt------------------------------------------------------tttttttttt i macFas5.chr3 C 0 I 12 s papAnu2.chr3 150893815 410 - 180432695 attcccattttttaaaaccatcagatctcatgagactcactcaacatcacaggaacagcacaggaaagacctgcccccatgattc-----aaccaccTCCCAACAAGTTCCTCCCATGGCATGTGGGAAcagtgggagctacaattcaagatgagatttgggtggggacacagccaaacagtATCAgaacacatttataatttttactttatcaaaacttaaaacttatgcacttcaaaagactttttttttaattttgtgagataggatctaactctgtcacccagactggagtgcagtggcacaatctcagctcactgcagcctccatcttctacaatcctcccaacttagcttcctaagtagctgggactacaggcgtgtaccactacatccagccaacctc------------------------------------------------------tttttctttt i papAnu2.chr3 C 0 I 2333 s chlSab2.chr2 14994547 403 - 90373283 attcccattttttaaaaccatcagatctcatgagactcactcaacatcacaggaacagcacaggaaagacctg------tgattc-----aaccacctcccaccaggttcctcccatggcatgtgggaacagtgggagctacaattcaagatgagatttgggtagggacacagccaaacagtatcagaacacatttatgatttttactttatcaaaacttaaaacttatgcacttcaaaagac-ttttttttaattttgtaagataggatctcactctgtcacccagactggagtgcaatggcacaatctcagctcactgcagcctccatcttctacaatcctcccaacttagcttcctaagtagctgggactacaggcgtgtaccactacatccagccaacttt------------------------------------------------------tttttttttt i chlSab2.chr2 C 0 I 21 s calJac3.chr21 21925225 402 + 50472720 acccacattT----aaaccatcagatcttatgagactcacagactatcatgggaatagcacaggaaagacc-----ccatgattcctggtaggcacctcctaccaggttcctcctatgacatctgggaattgtgggagttacaattcaagatgagttttggctggggacacagtcaaacaatattaGGACACATTTATAAGTTTTACTTTATCAAAATTTAAAACTTCTGCACTTCAGAATAA-TTTTT---AAGtttttgagacagggtctcactccatcacctagactggagtgtggcagcacagttacagctgactgcagcctccagcttctacaatcctcctaccttagcttcccaagtagctgggactacaggtatgtaccaccatgtccagccaacttt------------------------------------------------------tttttttttt i calJac3.chr21 I 1410 C 0 e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I e rheMac3.chr3 168543730 4872 - 198365852 I a score=513470.000000 s hg38.chr21_KI270874v1_alt 59616 314 + 166743 --------tggtaaagatgaggtctcactatattgcccaggctgatccccaactcctggactcaagcagtcctccacctcagccttgcaaagtgctgggattacaagcatgtgccactgtgcctggccaaaagactattaaagattaaaaatactattaaaataattttaaaaagcag-cttaactaatgaaataaaatatttacaaatcatgtatctgataggggaattttactcagaat-------atataaataactctaaatctcaataattaaaaaa-cataatccactaaaa--atatgggcaaaatattttagtaaacatttaact s panTro4.chr21 3672466 314 + 32799110 --------tggtaaagatgaggtctcactatattgcccaggctgatccccaactcctggactcaagcagtcctccacctcacccttgcaaagtgctgggattacaagcatgtgccactgtgcccggccaaaagactattaaagattaaaaatactattaaaataattttaaaaagcag-cttaactaatgaaataaaatatttacaaatcatgtatctgataggggaattttactcagaat-------atataaataactctaaatctcaataattaaaaaa-cataatccactaaaa--atatgggcaaaatattttagtaaacatttaact i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16924769 304 + 48394510 --------tggtaaagatgaggtctcactatattgcccaggctgatccccaactcctggactcaagcagtcctccacctcagccttgcaaagtgctggg-----tggcatgtgccactgtgcctggccaaaagattattaaagattaacaatacaattaaaataattttaaaaagcag-cttacctaatgaaataaaatatttacaaatcatgtatctgataggggaattttactcagaat-------atataaataactctaaatctcaataattaaaaaa-cataatccactaaaa--atatgggcaaaa-----tagtaaacatttaact i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4433120 304 + 32716333 --------ttgtaaagatgaggtctccctatattgcccaggctgatccccaactcctggactcaagcagtcctccacctcagccttgtaaagtgctggg---------atgtg-cactgtgcccggccaaaagattattaaagattaaaaatactattaaaat-attttaaaaagcag-cttacctaatgaaataaaatatttacaaatcatgtatctgataggggaattttgctcagaat-------atataaataactctaaatctcaataattaaaaaagcataatccactaaaa--atatgggcaaaatattttagtaaacatttaact i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162210566 322 - 192294377 --------tggtaaatacaaggtctcactatattacctaggctgatccccagctcctggactcaagcagtcctccatttcagccttgcaaagtgctgggattacaagcatgtgccactgtgcctggccaaaagattattaaagattaaaaacactgttaaaataattttaaaaagcag-cttacctaatgaaataaaatagttgcaaataatgtatctgataggggaattttactcagaatatataatatataaataactctaaatttcaataattaaaagaacataatccactaaaa--atatgggcaaaatattttagtaaacatttAACt i macFas5.chr3 I 12 I 2064 s chlSab2.chr2 14994971 323 - 90373283 --------tggtaaatacaaggtctcactatattacctaggctgatccccagctcctggactcaagcagtcctccatttcagccttgcaaagtgctgggattacaagcatgtgccactgtgcctggccaaaagattattaaagattaaaaacattgttaaaataattttaaaaagcagccttacctaatgaaataaaatagttacaaataatgtatctgataggggaattttactcagaatatataacatataaataactctaaatttcaataattaaaaaaacataatccactaaaa--gtatgggcaaaatattttagtaaacatttAACt i chlSab2.chr2 I 21 I 2085 s calJac3.chr21 21925627 325 + 50472720 tttttttttggtaaagacaaggtctcagtatattgtgcaggctgctccccaactcctggactcaagcagtcttccacctcgaccttgcaaggtgttgggattacaggcatgagccactatgcctggccAAAAGattatttaaaaataaaaatgctattaaaataatttttaaaagcag-ctgacctaatgaaataaaatatttacaaatcatgtatctgatagagggatgttactcaaaat-------atataaataactctaaatctcaataattaaaaatacagaatcccctaaaaagatatgggcaaaatattttggtaaacatttaact i calJac3.chr21 C 0 C 0 e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I e rheMac3.chr3 168543730 4872 - 198365852 I e papAnu2.chr3 150894225 2333 - 180432695 I a score=504134.000000 s hg38.chr21_KI270874v1_alt 59930 616 + 166743 aaagaaaatatacatgac----aagagaatttttaaaaatcctcaataacattagtcactaagataatgcaattt-aaaatcacaatgagattacaaatacaaacctattaaaatggccaaaatttgaacccctgaacataccaagtgttggaaaggatgtgaaggaattgaaactcttgtttgcagctggtgagactgcaaaatggtgggatgactctgtagagcattttggcagtttcttaaatagttaaaaatacacccaccatatgatccagctattctacgtctagatagttacccaagagaaattttaaaatattttcatacaaagatacatatgaa-----tgtttacagcagctttacttgtaatagccaaaattgagaagcaaccaaaa---tatctactatcagttaagtggataaacaaactctgggatatctaactttaaaaatacaaaacaataaaaaggaatgttctattgatacatattacatgaacgaatctcaaaatatgctgagtaaaatcagccagatttttgtaaagtacatgctacataattctagtcacataaattctaggcagtgcaaagcaaatagcaacaaaa---agaacagtagttgcctaggtg s panTro4.chr21 3672780 623 + 32799110 aaagaaaatatacatgacaagtaagagaatttttaaaaatcctcaataacattagtcactaagataatgcaattt-aaaatcacaatgagattacaaatacaaacctattaaaatggccaaaatttgaacccctgaacataccaagtgttggaaaggatgtgaaggaattgaaactcttgtttgcagctggtgagactgcaaaatggtgggatgactctgtagagcattttggcagtttcttaaatagttaaaaatacacccaccatatgatccagctattctacgtctagatagttacccaagagaaattttaaaatattttcatacaaagatacatatgaa-----tgtttacagcagctttacttgtaatagccaaaatcgagaagcaaccaaaaactgatctactatcagttaagtggataaacaaactctgggatatctaactttaaaaatacaaaacaataaaaaggaatgttctattgatacatactacatgaacgaatctcaaaatatgctgagtaaaatcagccagatttttgtaaagtacatgctacataattctagtcacataaattctaggcagtgcaaagcaaatagcaacaaaa---agaacagtagttgcctaggtg i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16925073 627 + 48394510 aaagaaaatatacatggcaaataagagaatttttaaaaatcctcaataacattagtcactaagataatgcaattt-aaaatcacaatgaga-tgcaaatacaaacctattaaaatggccaaaatttgaacccctgaacataccaagtgctggaaaggatatgaaggaattgaaactcttgtttgcagctggtgagtctgcaaaatggtgggatgactctgtagagcattttggcagtttcttaaatagttaaaaatacacacaccatataatccaggtattctacttccagatagttacccaagagaaattttaaaatattttcatacaaagacacatatgaatgttttgtttacagcagctttacttgtaatagccaaaatcaagaagcaaccaaaa---tatctactgtcagttaaatggataaacaaactctgggatatctaactttaaaaatacaaaacaataaaaaggaatgttctattgatacatattacatgaacgaatcccaaaatatgctgagtaaaatcagccagatttttgtaaagtacatgctacataattctagtcacataaattctaggcagtgcgaagcaaatagcaacaaaaagcagaacagtagttgcctaggta i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4433424 622 + 32716333 aaagaaaatatgcatggcaaataagagaattttttaaaatcctcaataacattagtcactaagataatgcaactt-aaaatcacaatgaga-tgcaaatacaaacctattaaaatggccaaaatttgaacccctgaacataccaagtgttggaaaggatgttaaggaattgaaactcttgtttgcagctggtgagactgcaaaatgctgggatgactctgtagagcattttggcagtttcttaaatagttaaaaatacacccaccatatgatccagctattctacttctagatagttatccaagagaaattttaaaatattttcatacaaagacacatatgaa-----tgtttacagcagctttacttgtaatagccaaaattgagaagcaaccaaaa---tatctactatcagttaaatggataaacaaactctgggatatctaaatttaaaaatacaaaacaataaaaaggaatgttctattgatacatattacatgaacgaacctcaaaatacgctgagtaaaatcagccagatttttttaaactacatgctacataattctagtcacataaattctaggcagtgcaaagcaaatagtaacaaaaagcagaacagtagttgcctaggta i nomLeu3.chr25 C 0 C 0 s calJac3.chr21 21925952 619 + 50472720 aaagaaaatacacgtggcaaataagagcattaaaagaaatcctcaataacattagtcactaagataacacaatttaaaaatcacaatgaga-tgcaaatacaaacctactagaatggccaaaatttgaaaccctgaacataccaagtgttggaaaggatgtgaaggaactgaaactcttgtttgcagctggtgagactgcaaaatggtaggatcactctgtagtgcattttggcagtttcttaaatagttaaaaatacacccaccatatgatccagccactctacttc----tagttacccaagagaaatttaaaaatatatacacacagagacacgcatgaa-----cgtttatagcagctttccttgtaattgccaaaataaagaagcaaccaaaa---tatctactatcagttaaatggataaccaaactccaggatatctagatttaaaaatataaaacaagaaaacagaatgctttattaatacatattacatgaacaaatctcaaaatatgctgagtaaaatcagccagattttttaaaagcacatgctgcgtgattctattcacataaattctaggtattgtgaggtaagtaataacaaaaagcaggtcagtagttgcctaggta i calJac3.chr21 C 0 C 0 e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I e rheMac3.chr3 168543730 4872 - 198365852 I e chlSab2.chr2 14995294 2085 - 90373283 I e macFas5.chr3 162210888 2064 - 192294377 I e papAnu2.chr3 150894225 2333 - 180432695 I a score=236337.000000 s hg38.chr21_KI270874v1_alt 60546 259 + 166743 tggtgttaaaatgattgggacacaaaatgaggaaaatttgagcaccacaataattaatgatagtaatgtattataatac-------ctttttaaatgcatgact--atttaaaaaagaaaaagtgacc-aaaaaattaagaaaaggagaaagaaagcctctactttggaaaagaatgtcaggtagcaaattaaaaataaatgagacaatcagaaaaataacattttgcaaactgcaatataatgactgaatcagg-aaaagtcatcgatg- s panTro4.chr21 3673403 259 + 32799110 tggTGTTAAAATGATTGGGACACAAAATGAggaaaaattgagcaccacaataattaatgatagtaatgtattataatac-------ctttttaaatgcatgact--atttaaaaaagaaaaagtgacc-aaaaaattaagaaaaggagaaagaaaggctctactttggaaaagaatgtcaggtagcaaattaaaaataaatgagacaatcagaaaaataacattttgcaaactgcaatataatgactgaatcagg-aaaagtcatcgatg- i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16925700 260 + 48394510 tggTGTTAAAATGATTGGGATAcaaattgaggaaaatttgagcaccacaataattaatgatagtaatgtactataatac-------ctttttaaatgcatgact--atttaaaaaagaaaaagtgaccaaaaaaattaagaaaaggaaaaagaaaggctctactttggaaaagaatgccagatagcaaatttaaaataaatgagacaatcagaaaaataacattttgcgaactgcaatataatgactgaatcagg-aaaagtcatcaatt- i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4434046 260 + 32716333 tggTGTTAAAATGATTGGGACAcaaattgagaaaaatttgagaaccacaataattaatgatagtaatgtattataatac-------ctttttaaatgcatggct--atttagaaaagaaaaagtgaccaaaaaaattaaggaaaggagaaagaaaggctctactggggaaaagaatgccagatagcaaatttaaaataaatgagacaatcagaaaaataacattttgcaaactacaatataatgactgaatcagc-aaaagtcatcaatt- i nomLeu3.chr25 C 0 C 0 s calJac3.chr21 21926571 252 + 50472720 tggtgttgaaatgattgggacacaaactgaggaaactttgagcaccacaataattactgataataatttattataatac-------attttt-aatgtatgac----tttaaaaaagaaacaatgaca-aaaaaattaagaaaacg----ggaaaggctctactttggaaaataatgccagctaataaatttaaaataaatatgacaatcagaaaaataacattttgcaaactgcaatctaatgaccaaatcagg-aaaagttatcaatt- i calJac3.chr21 C 0 C 0 s canFam3.chr31 13814832 250 + 39895921 TGCTATTAATAGGACTGAGACAcaaactggtgaaaatttgaggactatagtaa----tggtaataatgta-taaaatacactgaatttttttaaatatgtgagttcatctaaaaaggagaaagagaaaaaaaaacttaaaga----------gaagcctctcatttgggaaagaatgccagataaaaaat-----ataaatttgataatcagaaaaatgatcatttacaaacc-taatactataatttaatcaggtgtaaattagcaattg i canFam3.chr31 I 13813 C 0 e mm10.chr16 78103541 6993 + 98207768 I e rheMac3.chr3 168543730 4872 - 198365852 I e chlSab2.chr2 14995294 2085 - 90373283 I e macFas5.chr3 162210888 2064 - 192294377 I e papAnu2.chr3 150894225 2333 - 180432695 I a score=4783.000000 s hg38.chr21_KI270874v1_alt 60805 5 + 166743 aatgt s panTro4.chr21 3673662 5 + 32799110 aatgt i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16925960 5 + 48394510 aatgt i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4434306 5 + 32716333 aatgt i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162212952 5 - 192294377 aaaga i macFas5.chr3 I 2064 C 0 s papAnu2.chr3 150896558 5 - 180432695 aaaga i papAnu2.chr3 I 2333 C 0 s calJac3.chr21 21926823 5 + 50472720 aatgt i calJac3.chr21 C 0 I 1 s canFam3.chr31 13815082 5 + 39895921 attct i canFam3.chr31 C 0 C 0 e mm10.chr16 78103541 6993 + 98207768 I e rheMac3.chr3 168543730 4872 - 198365852 I e chlSab2.chr2 14995294 2085 - 90373283 I a score=147499.000000 s hg38.chr21_KI270874v1_alt 60810 43 + 166743 aaaaaATGATTTATA--CTTCTACATATTTTATA-T-TTTCACACTT s panTro4.chr21 3673667 43 + 32799110 aaaaaATGATTTATA--CTTCTACATATTTTATA-T-TTTCACACTT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16925965 43 + 48394510 aaaaaATGATTTATA--CTTCTACATATTTTATA-T-TTTCACACTT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4434311 43 + 32716333 aaaacATGATTTATA--CTTCTACATGTTTTATA-T-TTTCACACTT i nomLeu3.chr25 C 0 I 2091 s rheMac3.chr3 168548602 43 - 198365852 aaaAAATGATTTATA--CTTCTACATATTTTACA-T-TTTCACACTT i rheMac3.chr3 I 4872 C 0 s macFas5.chr3 162212957 43 - 192294377 aaaAAATGATTTATA--CTTCTACATATTTTACA-T-TTTCACACTT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150896563 43 - 180432695 aaaaaatgatttata--cttctacatattttaca-t-tttcacactT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14997379 43 - 90373283 AAAAAATGATTTCTA--CTTCTACATATTTTACA-T-TTTCACACTT i chlSab2.chr2 I 2085 C 0 s calJac3.chr21 21926829 44 + 50472720 aaaaAATGATTTCTA--CTTCTACATATTTTGTATT-TTTCACACTT i calJac3.chr21 I 1 C 0 s canFam3.chr31 13815087 46 + 39895921 aaaacATGGTTTATACTCTTTTATACACTCTATA-TATTTCACATTT i canFam3.chr31 C 0 C 0 e mm10.chr16 78103541 6993 + 98207768 I a score=96135.000000 s hg38.chr21_KI270874v1_alt 60853 30 + 166743 --GAAAAATGACTAACCTTTGTAAATCTAATA s panTro4.chr21 3673710 30 + 32799110 --GAAAAATGACTAACCTTTGTAAATCTAATA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16926008 30 + 48394510 --GAAAAATGACTAACCTTTGTAAGTCTAATA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4436445 30 + 32716333 --GAAAAATGACTAATTTTTGTAAATCTAACA i nomLeu3.chr25 I 2091 C 0 s rheMac3.chr3 168548645 30 - 198365852 --GAAAAATGACTAACCTTTGTAAGTCTAATA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162213000 30 - 192294377 --GAAAAATGACTAACCTTTGTAAGTCTAATA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150896606 30 - 180432695 --GAAAAATGACTAACCTTTGTAAGTCTAGTA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14997422 30 - 90373283 --GAAAAATGACTAACCTTTGTAAGTCTAATA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21926873 30 + 50472720 --GAAAAATGACTAAACTTCGTAAGTCTAGTA i calJac3.chr21 C 0 C 0 s canFam3.chr31 13815133 31 + 39895921 TATTAAAGCTACTAGCATTCTT-AGTCTAATA i canFam3.chr31 C 0 C 0 e mm10.chr16 78103541 6993 + 98207768 I a score=2699505.000000 s hg38.chr21_KI270874v1_alt 60883 719 + 166743 AGTTTATATTTGTTGATATTTCTTACCCATGTGTAGGTCTTC-----TTTGTTTGAACAAACTTAAACTTGCACATTTCTCTTGTAATACAAAGCAG-TTCTGATAAAGGTATATTAAGCTA-CAAACACATGACAGAATTTTCTAGAGAAGACTTTCTTTGATACAAAT----AATTCTGGCAACAGTAAGCAGGTTATTTATAACTCCTGTTCTAATCTAGAAAATAACTTAGATCTCTGTTTCAAA-CACTTTTACA---TATTGAGATACA----CATT-CACAAGAGTCAATAAAGAAAAATGCTTTTATACTATG----TTTTCTGAGATTTTTGTGCTAATGACAACAATAAGTATAAAATCTTCTT-CAATTTCTATATGTTTG-----CTGAGATTG-----AAGCAAAGAAA-TTGGT-------TGTTTATCTTCTATTCTTCTTGCTATCT---TTGATAGCTGGCATTT---CTTTCTAC---AGAAACAAAAATAAA---GTAG-AAAAAACCCTCAAATGTCATTGACATGTTTTCAGCAGCTAAGTATGAAATTTAAACATTTCACCTCTGGCAATTTCAGTATTATTTTATATCAATTATCTAGGGAATTACTTCTTTATTTAGCTCTAGGTATAAAAAGGAGTAAAATTCCTCCAGTGATTGAAGCTACTGACAGAATTCTGCTAGGAATTTTGAACATACAT--------------CTCTTCCTCTCTCCTTTCAGCAGCAAAGTACGTGGGGAAATTATGTCAATTATG s panTro4.chr21 3673740 724 + 32799110 AGTTTATATTTGTTGATATTTCTTACCCATGTGTAGGTCTTCTTTGATTTGTTTGAACAAACTTAAACTTGCACATTTCTCTTGTAATACAAAGCAG-TTCTGATAAAGGT-TATTAAGCTA-CAAACACATGACAGAATTTTCTAGAGAAGACTTTCTTTGATACAAAT----AATTCTGGCAACAGTAAGCAGGTTATTTATAACTCCTGTTCTAATCTAGAAAATAACTTAGATCTCTGTTTCAAA-CACTTTTACA---TATTGAGATACA----TATT-CACAAGATTCAGTAAAGAAAAATGCTTTTATACTATG----TTTTCTGAGATTTTTGCACTAATGACAACAATAAGTATAAAATCTTCTT-CAATTTCTATATGTTTG-----CTGAGATTG-----AAGCAAAGAAA-TTGGT-------TGTTTATCTTCTATTCTTCTTGCTATCT---TTGATAGCTGGCATTT---CTTTCTAC---AGAAACAAAAATAAA---GTAGAAAAAAACCCTCAAATGTCATTGACATGTTTTCAGCAGCTAAGTATGAAATTTAAACATTTCACCTCTGGCAATTTCAGTATTATTTTATATCAATTATCTAGGGAATTACTTCTTTATTTAGCTCTAGGTATAAAAAGGAGTAAAATTCCTCCAGTGATTGAAGCTACTGACAGAATTCTGCTAGGAATTTTGAACATACAT--------------CTCTTCCTCTCTCCTTTCAGCAGCAAAGTACGTGGGGAAATTATGTCAATTATG i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16926038 725 + 48394510 AGTTTATATTTGTTGATATTTCTTACCCATGTGTAGGTCTTCTTCGATTTGTTTGAAAAAACTTAAACTTGTACGTTTCTCTTGTAATACAAAGCAG-TTCCGATAATGGTATATTAAGCTA-CAAACACATGGCAGAATTTTCTAGAGAAGACTTTCTTTGATACAAAT----AATTCTGGCAACAGTAAACAGGTTATTTATAACTCCTGTTCTAATCTAGAAAATAACTTAGATCTCTGTTTCAAACCACTTTTACA---TATTGAGATACA----TATT-CACAAGAGTCAATAAAGAAAAATGCTTTTATACTATG----TTTTCAGGGATTTTTGTGCTAATGACAACAATAAGTATAAAATCTTCTT-CAATTTCTACATGTTTG-----CTGAGATTG-----AAGCAAAGAAA-TTGGT-------TGTTTATCTTCTATTCTTCTTGCTATCT---TTGATAGCTGGCATTT---CTTTCTAC---AGAAACAAAAATAAA---GTAG-AAAAAAATCTCAAATGTCATTGACATGTTTTCAGCAGCTAAGTATGCAATTTAAACATTTCACCTCTAGCAATTTCAGTATTATTTTATATAAATTATCTAGGGAATTACTTCTTTATTTAGCTCTAGGTATAAAAAGGAGTAAAATTCCTCCAGTGATTGAAGCTACTAACAGAATTCTACTAGGAATTTTGAACATACAT--------------CTCTTCCTCTCTCCTTTCAGCAGCAAAGTACGTGGGGAAATTATGTCAATTATG i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4436475 718 + 32716333 AGTTTATATTTGTTGATATTTCTTACCCATGTGTAGGTCTTCTTCGATTTGTTTGAACAAACTTAAACTTGTACATTTCTCTTGTAATGGGAAGCAG-TTCTGATAATGGTATATTAAGCTA-CAAACACATGGCAGAATTTTCTAGAGAAGACTTTCTTTGATACAAAT----AATTCTGGCAACAGTAAACAGGTTATT--TAACTCCTGTTCTAATCTAGAAAATAACTTAGATCTCTGTTTCAAACCACTTTTACA---TATTGAGATACA----TATT-CACAAGAGCCTATAAAGAAAAATGCTTCTATACTATG----TTTTCTGAGATTTTTGCACTAATG---ACAATAAGTATAAAATCTTCTT-CAATTTCTGTATGTTTG-----CTGAGATTG-----AAGCAAAGAAA-TTGGT-------TGTTTATCTTCTATTCTTCTTGCTATCT---TTGATAGCTGGCATTT---CTTTCTAC---AGAAACAAAAATAAA---GTAG-AAAAAA-TCTCAAATGTCACTGACATGTTTTCAGCAGTTAAGTATGCAATTTAAACATTTCTCC-CTAGCAATTTCAGTATTATTTTATATCAATTATCTAGGGAATTACTCCTTTATTTAGCTCTAGGTATAAAAACGAGTAAAATTCCTCCAGTGATTGAAGCTACTGACAGAATTCTGCTAGGAATTTTGAACATACAT--------------CTCTTCCTCTCTCCTTTCAGCAGCAAAGTACCTGGGGAAATTATGTCAATTATG i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168548675 722 - 198365852 AGTTTATATTCGTTGATATTTCTTACCCATGTGTATGTCTTCTTCAATTTGTTTGAAAAAACTTAAGTTTGTACATTTCTC--GTAATGGGAAGCAG-TTCTGATAAAGGTATATTAAGCTA-CAAACACATGGCAGAATTTTCTAGAGAAGACTTTCTTTGATACAAAT----AATTCTGGCAACAGTAAACAGGTTATTTATAACTCCTGTTCTAATCTAGAAAATAACGTAGATCTCTGTTTCGAACTACTTTTACA---TATAGAGATACA----TATT-CACAAGAGTCAATTAAGAAAAATGCTTTTATACTATG----TTTTCTGAGATTTTTGCACTAATGACAACAATAAGCACAAAATCTTCTT-TGATTTCTATACATTTG-----CTGAGATTG-----AAGCAAAGAAA-TTGGT-------TGTTTATCTTCTGTTTTTCTTACTATCT---TTGATAGCTGGCATTT---CTTTCTAC---AGAAACAAAAATAAA---GTAG-AAAAAA-TCTCAAATATCATTGATATGTTTTCAGCAGCTAAGTATGCAATTTAAACATTTCACCTCTAGCAATTTCAGTGTTAATTTATATCAATTATCTAGGGAATTACTCCTTTATTTAGCTCTAAGTATAAAAAGGAGTAAAATTCCTCCAGTGATTGAAGCTACTGACAGTATTCTGCTAGGAATTTTGAACATACAT--------------CTCTTCCTCTCTCCTTTCAGCAGCAAAGTACCTGGGGAAATTATGTCAATTATG i rheMac3.chr3 C 0 I 1125 s macFas5.chr3 162213030 722 - 192294377 AGTTTATATTTGTTGATATTTCTTACCCATGTGTATGTCTTCTTCAATTTGTTTGAAAAAACTTAAGTTTGTACATTTCTC--GTAATGGGAAGCAG-TTCTGATAAAGGTATATTAAGCTA-CAAACACATGGCAGAATTTTCTAGAGAAGACTTTCTTTGATACAAAT----AATTCTGGCAACAGTAAACAGGTTATTTATAACTCCTGTTCTAATCTAGAAAATAACGTAGATCTCTGTTTCGAACTACTTTTACA---TATAGAGATACA----TATT-CACAAGAGTCAATTAAGAAAAATGCTTTTATACTATG----TTTTCTGAGATTTTTGCACTAATGACAACAATAAGCACAAAATCTTCTT-TGATTTCTATACATTTG-----CTGAGATTG-----AAGCAAAGAAA-TTGGT-------TGTTTATCTTCTGTTTTTCTTACTATCT---TTGATAGCTGGCATTT---CTTTCTAC---AGAAACAAAAATAAA---GTAG-AAAAAA-TCTCAAATATCATTGATATGTTTTCAGCAGCTAAGTATGCAATTTAAACATTTCACCTCTAGCAATTTCAGTGTTAATTTATATCAATTATCTAGGGAATTACTCCTTTATTTAGCTCTAAGTATAAAAAGGAGTAAAATTCCTCCAGTGATTGAAGCTACTGACAGTATTCTGCTAGGAATTTTGAACATACAT--------------CTCTTCCTCTCTCCTTTCAGCAGCAAAGTACCTGGGGAAATTATGTCAATTATG i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150896636 720 - 180432695 AGTTTATATTTGTTGATATTTCTTacccatgtgtatgtcttcttcaaTTTGTTTGAACAAACTTAAGCTTGTACATTTCTC--ATAATGGGAAGCAG-TTCTGATAAAGGTATATTAAGTTA-CAAACACATGGCAGAATTTTCTAAAGAAGACTTTCTTTGATACAAAT----AATTCTGGCAACAGTAAACAGGCTATTTATAACTCCTGTTCTAATCTAGAAAATAACTTAGATCTCTGTTTCAAACCACTTTTACA---TATAGAGATACA----TATT-CACA--AGtcaataaagaaaaatgcttttataCTATG----TTTTCTGAGATTTTTGCACTAATGACAACAATAAGCACAAAATCTTCTT-CGATTTCTATACATTTG-----CTGAGATTG-----AAGCAAAGAAA-TTGGT-------TGTTTATCTTCTATTCTTCTTGCTATCT---TTGATAGCTGGCATTT---CTttctac---agaaacaaaaataaa---gtag-aaaaaa-tctCAAATATCATTGATATGTTTTCAGCAGCTAAGTATGCAATTTAAACATTTCACCTCTAGCAATTTCAGTGTTAATTTATATCAATTATCTAGGGAATTACTCCTTTATTTAGCTCTAGGTATAAAAAGGAGTAAAATTCCTCCAGTGATTGAAGCTACTGACAGTATTCTGCTAGGAATTTTGAACAtacat--------------ctcttcctctctcctttcagCAGCAAAGTACCTGGGGAAATTATGTCAATTATG i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14997452 720 - 90373283 AGTTTATATTTATTGATATTTCTTACCCATGTGTATGTCTTCTTCAATTTGTTTGAACAAACTTAAGTTTGTACATTTCTC--GTAATGGGAAGCAG-TTCTGATAAAGGTATATTAAGCTA-CAAACACACGGCAGAATTTTCTAGAGAAGACTTTCTTTGATACAAAT----AATTCTGGCAACAGTAAACAGGTTATTTATAACTCCTGTTCTAATCTAGAAAATAACTTAGATCTCTGTTTCAAACCACTTTTACA---TATAGAGATACA----TATT-CACAAGAGTCAATAAAGAAAAATGCTTTTATACTATG----TTTTCTGAGATTTTTGCACTAATTAAAACAATAAGCACAAAATCTTCTT-TGATTTCTATACATTTG-----CTGAGATTG-----AAGCAAAGAAA-TTGGT-------TGTTTATCTTCTGTTCTTCTTGCTATCT---TTGATAGCTGACATTT---CTTTCTAC---AGAAACAAAAATAAA---GTAG-AAAAAA-TCTCAAATATCATTG--ATGTTTTCAGCAGCTAAGTATGCAATTTAAACATTTCACCTCTAGCAATTTCAGTGTTAATTTATATCAATTATCTAGGGAATTACTCCTTTATTTAGCTCTAAGTATAAAAAGGAGTAAAATTCCTCCAGTGATTGAAGCTACTGACAGTATTCTGCTAGGAATTTTGAACATACAT--------------CTCTTCCTCTCTCCTTTCAGCAGCAAAGTACCTGGGGAAATTATGTCAATTATG i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21926903 723 + 50472720 AGTTTACATTTATTGATATTTCTTACCCATGTGTATGTCTCTTTCAATTCCTTTACACAAACTCAATCTTGTACATTTCTCTTGTAATGTGAAGCAG-TTCTGATAAAGGCCTATTAAGCTA-CAAAGACATGGCAGAATTTTCTAGAGAAGACTTTCTTTGATGCAAAT----AATTCCAGCAACAGTAAACAGGTTATTTATAACTCCTGTTCTAGTCTAAAAAATAACTTAGATCTCTGTTTCAAACCACTTTTACA---TATAGAGATAGA----TATTCCATAAGAGTCAATAAAT-AAAATGGTTTTTTACTATG----TTTTCTGAGATTTTTGTGCTAATGACAATAGTAACTATAAAATCTTC----AATTTCTATACATTTT-----CTGAGATTG-----AAGCAAATAAG-TTGCT-----TATATTTATCTTATATTCGTCTGGCTGTCT---TTGATAGCTGGCATTT---CTTACTAC---AGAAACAAAAATAAA---GTAG-AAAAAAATTTCAAATGTCATTGATATGTTTCCAGCAGCTAAGTATGCAATTTAAACATTTCACCTCCAGCAATTTCAGTGTTATTTTATATCAATTATCTAGGGAATTACTCCTTTACTTAACTCTAGGTATAAAAAGGAGT-AAATTCCTCCAGTGATTGAAGCTACTGCCAGTATTCTGTTAGGAATTTTGAACATACAT--------------CTTTTCCTCTCTCCTTTCAGCAGCAAAGTACCTGGGGAAATTATGTCAATTATG i calJac3.chr21 C 0 C 0 s mm10.chr16 78110534 715 + 98207768 AGCTAATATTAGCTGAAGATCTGCTCCCAT-----------------TTCTTTTGCATGAATTCAACCTGATACACTTCTCTTGGAATGGGCAGCGA-TTCTGATTAGCATGTGTGAAACTATTAAAGGGATGGTAGTGTTTTC-AGAGAAGACTTTCCATGGTGCAAAT------------CAAGGATAGAGAAGTGATTTATAAGTCCTGTTCTG--CTGGAAAATAACTACAATGTCTGTCTCAAATCGTTCTCACA---AAGAGAGACACAGGCCTATC-CACAAGAGTCAACAAAG----ATGTTTTTATACGGTGCTGCCTGCCTGAGGCTTTTGTGCTAATG---ACAAGGAGTATAAAATGTTCCT-CAATTTCTATACAT--------CTAAAATTGTGTGCAAGCAAAGAGG-TTGATAACATTCTCTCTATTTTTTTTTATTCTTTTTTTCTGTCTTGACAGCTGGCATTTCTCCTTTCTATATAATAAACAAAGACAAATTTGGGG-AAAAAA-ATTCGAACACGGCTGATATGATTTTAGCAGCTAAGTGTGCAATCTGGACACTTCACCTCTAGCAATTTCAGTAAT-TTTTTTTTCAATTAGCTTGGGAGCTACTGCTTTATATACCTCCAGGTGTGCAGAGCAATGGAATCCCTCCAGTGGTTGAAGCTGCTCTCAGTATTCTGCCAGGAG-TCTGAACACATGT--------------CTACTCCTCTCTCCGTT-AGCAGCAAAATACCTGAGG-GATTGTGTAACTCATG i mm10.chr16 I 6993 I 1 s canFam3.chr31 13815164 723 + 39895921 ATTTTAAGTTTGCCGGTATCTCTCACCCAG-----------------TTTCTTTACA-AAACTCAACCTGCTGAATTTCTTTTGTAATGAGCAGCAATTTTTGATAAAGGTATGGTGAACTA-CAAAGTCATGGTAGCATTTTCTAGGGAAGACTT----TGATACAAATGAAAAATTCTGGCAATAGTATAAAGGTTATATATAAGTCCTGATCTAGTCTGAAAAATAACTTAGATCTCTGTTTCAAGTCATTTTCACAAACAACAGAGATACA----TACT-CCCAAAAATCAATAAAG----ATGCTTTTACA--AAG----TTTTCCAAGATTTTTG---TGATGACAAGAATGCATGCAAAATGTTCTTCCAATTTCCCCACATTTTATGACGTGAGATTG-----AAGCAGAGAGACTTGGT-----TGTATGTATCTTCCATCATTCTTGCT-------GTGATAGCAGATATTC-TCTTTACTAT---AGAAATAAAAATAAA---ATAG-AAAAAAATCTCAAATGTTACTGATATGTTTTTAGCAGCAAAGCATGCATTTTGAACATTTCACCTCTGGCAATTTCAGTATTATTTTATTTCAATTAGCTAGGGAACTACTGCTTTATATAGCTGCAGGTGTAAAAGGAAGTGAAATGCCTCTAGTGATTGAGGCTACTGCGAGTATCCTGATAGGAATTTTGAATATACATCCTCTGCATCTCTACTTTTCCTCCTTACTTTTAACATCAAAATATCTGGGGAAATCAAGTTAATTATG i canFam3.chr31 C 0 C 0 a score=56256.000000 s hg38.chr21_KI270874v1_alt 61602 24 + 166743 AATTTTTCTGTTATACTTAAAATA s panTro4.chr21 3674464 24 + 32799110 AATTTTTCTGTTATACTTAAAATA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16926763 24 + 48394510 AATTTTTCTGTTATACTTAAAATA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4437193 24 + 32716333 AATTTTTCTGTTATATTTAAAATA i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162213752 23 - 192294377 CTTTTCTCCGTCA-ACTTAAAATA i macFas5.chr3 C 0 I 4 s papAnu2.chr3 150897356 24 - 180432695 CATTTCTCCGTCAtacttaaaata i papAnu2.chr3 C 0 I 1195 s chlSab2.chr2 14998172 24 - 90373283 CATTTCTCCATCATACTTAAAATA i chlSab2.chr2 C 0 I 1386 s calJac3.chr21 21927626 24 + 50472720 AATTGTTCTGTTATTCTTAAAATA i calJac3.chr21 C 0 C 0 s mm10.chr16 78111250 22 + 98207768 AGAGTTCCTGTTAT--TTAAAATC i mm10.chr16 I 1 C 0 s canFam3.chr31 13815887 24 + 39895921 AACTGTTCTGTTATACTTAGAAAA i canFam3.chr31 C 0 C 0 e rheMac3.chr3 168549397 1125 - 198365852 I a score=14961.000000 s hg38.chr21_KI270874v1_alt 61626 9 + 166743 CATCCTAAG s panTro4.chr21 3674488 9 + 32799110 CATCCTAAG i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16926787 9 + 48394510 CATCCTAAG i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4437217 9 + 32716333 CATCCTAAG i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162213779 9 - 192294377 ttttttaat i macFas5.chr3 I 4 C 0 s calJac3.chr21 21927650 9 + 50472720 CATCCTAAG i calJac3.chr21 C 0 C 0 s mm10.chr16 78111272 9 + 98207768 CATCCTTAG i mm10.chr16 C 0 C 0 s canFam3.chr31 13815911 9 + 39895921 TATCCTTAG i canFam3.chr31 C 0 C 0 e rheMac3.chr3 168549397 1125 - 198365852 I e chlSab2.chr2 14998196 1386 - 90373283 I e papAnu2.chr3 150897380 1195 - 180432695 I a score=2549.000000 s hg38.chr21_KI270874v1_alt 61635 4 + 166743 TTTT- s panTro4.chr21 3674497 4 + 32799110 TTTT- i panTro4.chr21 C 0 I 1 s ponAbe2.chr21 16926796 4 + 48394510 TTTA- i ponAbe2.chr21 C 0 I 1 s nomLeu3.chr25 4437226 4 + 32716333 TTTT- i nomLeu3.chr25 C 0 I 1 s macFas5.chr3 162213788 4 - 192294377 tttt- i macFas5.chr3 C 0 I 1201 s papAnu2.chr3 150898575 4 - 180432695 tttc- i papAnu2.chr3 I 1195 I 1 s calJac3.chr21 21927659 4 + 50472720 TTTA- i calJac3.chr21 C 0 I 283 s mm10.chr16 78111281 4 + 98207768 TATT- i mm10.chr16 C 0 C 0 s canFam3.chr31 13815920 4 + 39895921 -TTAA i canFam3.chr31 C 0 C 0 e rheMac3.chr3 168549397 1125 - 198365852 I e chlSab2.chr2 14998196 1386 - 90373283 I a score=1911.000000 s hg38.chr21_KI270874v1_alt 61639 1 + 166743 A s panTro4.chr21 3674502 1 + 32799110 A i panTro4.chr21 I 1 C 0 s ponAbe2.chr21 16926801 1 + 48394510 A i ponAbe2.chr21 I 1 C 0 s nomLeu3.chr25 4437231 1 + 32716333 A i nomLeu3.chr25 I 1 C 0 s calJac3.chr21 21927946 1 + 50472720 a i calJac3.chr21 I 283 C 0 s mm10.chr16 78111285 1 + 98207768 A i mm10.chr16 C 0 I 3887 s canFam3.chr31 13815924 1 + 39895921 A i canFam3.chr31 C 0 C 0 e rheMac3.chr3 168549397 1125 - 198365852 I e chlSab2.chr2 14998196 1386 - 90373283 I e macFas5.chr3 162213792 1201 - 192294377 I e papAnu2.chr3 150898579 1 - 180432695 I a score=481771.000000 s hg38.chr21_KI270874v1_alt 61640 167 + 166743 ------AAAAAATTAAAGCTTGATGCCGCTGGAAAGTT-TATTAGTTATTATTAAGAGCCTGAAATAAATGAAGAGGCAAGTCCAC---------CAAAAACAAAAAT-CCAAAACACAG------------------------AAAAATAGT---ATAACTCTTAAGAAAACAAAGTAGATTTTAATTATTTTT---------ATTTTTT------ATTTTTAAA s panTro4.chr21 3674503 167 + 32799110 ------AAAAAATTAAAGCTTGATGCCGCTGGAAAGTT-TATTAGTTATTATTAAGAGCCTGAAACAAATGGAGAGGCAAGTCCAC---------CAAAAACAAAAAT-CCAAAACACAG------------------------AAAAATAGT---ATAACTCTTAAGAAAACAAAGTAGattttaattattttt---------atttttt------atttttaaa i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16926802 167 + 48394510 ------AAAAAATTAAAGCTTGATGCCGCTGGAAAGTT-TATTAGTCATTATTAAGAGCCTGAAACAAATGAAGAAGCAAATCCAC---------CAAAAACAAAAAT-CCAAAACACAG------------------------AAAAATAGT---ATAACTCTTAAGAAAGCAAGGTAGaatttaattattttt---------atttttt------atttttaaa i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4437232 165 + 32716333 ------AAAAAAATAAAGCTTGACACTGCTGGAAAGTT-TATTAGTCATTATTAAGAGCCTGAAACAAATGGAGAAGCAAGTCCGC---------CAAAAACAAAAAT-CCGAAACACAG------------------------AAAAATAGT---ATAA--CTTAAGAAAACAAGGTAGATTTTAATTATTTTT---------ATTTTTT------ATTTTTAAA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168550522 166 - 198365852 ------aAAAAATTAAAGCTTTACAATGCTGGAAAGTT-TATTAGTCATTGTTAAGAGCCTGAAACAACTGGAGAAGCAAGTCCAC---------CAAAAACAAAAAT-CCAAAACACAG------------------------AAAAATAGTATGATAACTCTTAAGAAAACAAGGTAGATTTTAATTATGTTG---------ATTT----------TTTTTTAA i rheMac3.chr3 I 1125 C 0 s macFas5.chr3 162214993 165 - 192294377 ------aAAAAATTAAAGCTTTACAATGCTGGAAAGTT-TATTAGTCATTGTTAAGAGCCTGAAACAACTGGAGAAGCAAGTCCAC---------CAAAAACAAAAAT-CCAAAACACAG------------------------AAAAATAGTATGATAACTCTTAAGAAAACAAGGTAGATTTTAATTATGTTG---------A-TT----------TTTTTTAA i macFas5.chr3 I 1201 C 0 s papAnu2.chr3 150898580 170 - 180432695 ------aaaaaattaaagcttTACAATGCTGGAAAGTT-TATCAGTCATTATTAAGAGCCTGAAACAACTGGAGAAGCAAgtccac---------caaaaacaaaaat-ccgAAACACAG------------------------AAAAATAGTATGATAACTCTTAAGAAAACAAGGTAGATTTTAATTAtgttg---------atttttc------attttcaaa i papAnu2.chr3 I 1 C 0 s chlSab2.chr2 14999582 170 - 90373283 ------aAAAAATTAAAGCTTTACAATGCTGGAAAGTT-TATTAGTCATTGTTAAGAGCCTGAAACAACTGGTGAAGCAAGTCCAC---------CAAAAACGAAAAT-CCAAAACACAG------------------------AAAAATAGTATGATAACTCTTAAGAAAACAAGGTAGATTTTAATTATGATG---------ATTTTTT------ATTTTTAAA i chlSab2.chr2 I 1386 C 0 s calJac3.chr21 21927947 189 + 50472720 ------aaaGTATTAAAGCTTTATACGGCTAGAAAGTT-TATTAGTCA---TTAAGAAGCTGAAACAATTGGAGAAGCAAGTCCAC---------CAAAAACAAAAAT-CCAAAACACAGATCATGCTGTGAATTTCTGAA--TAAAAATACTGTGATAACTCTTAAGAAAACAAGGTAGattttaattattttt---------atttttc------atttttaaa i calJac3.chr21 C 0 C 0 s canFam3.chr31 13815925 221 + 39895921 AAAAAAAAAAGAATAAAGTTTTACACTGCTAGAAAGTTGTATTAGCCATTATCAAAAGGCTGAAACA----GAGAAGCAAAACCACACACACACACAAAAAAAAAAATAAAAAAACAAAGATCATAGTACATATTTCTGAATTTGAAAGTAATGCGATAATTCTTAAGGAAAAGAAGTA-ACTTTAATGATTTTTTTTAACAAAACTATTTAAAAAGATTTTTAgg i canFam3.chr31 C 0 I 150 e mm10.chr16 78111286 3887 + 98207768 I a score=602349.000000 s hg38.chr21_KI270874v1_alt 61807 182 + 166743 AGGAATCAATTAAGAA------GAGAGAAGGATTTAGATTGTTTTTCTTTATTTTTCCAATTTTTACTAAGAATATATTTCTCAGTTACTGCTTCCTATGTCTGCCCAACAAAGATAATTGGAAATTTCCTGCCAATTTAATCTAAGGAGATTGTGTACTTGTTCAAT-GTACACCACTCTGTTTCcac s panTro4.chr21 3674670 182 + 32799110 aGGAATCAATTAAGAA------GAGAGAAGGATTTAGATTGTTTTTCTTTATTTTTCCAATTTTTACTAAGAATATATTTCTCAGTTACTGCTTCCTATGTCTGCCCAACAAAGATAATTGGAAATTTCCTGCCAATTTAATCTAAGGAGATGGTGTACTTGTTCAAT-GTACACCACTCTGTTTCcac i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16926969 182 + 48394510 aGGAATCAATTAAGAA------GAGAGAAGGATTTAGATTGTTTTTCTTTATTTTTCCAATTTTTACTAAGAATATATTTCTCAGATACTGCTTCCTATATCTGCCCAACAAAGACAATTGGAAATTTCCTGCCAATTTAATCTAAGGAGATGGTCTATTTGTTCCAT-GTACACTACTCTGTTTCCAC i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4437397 178 + 32716333 AGGAATCAATTAAGAA------GAGAGAAGGATTTAGA----TTTTCTTTATTTTTCCAATTTTTACTAAGAATATATTTCTCAGTTACTGCTTCCTATGTCTGCCCAACAAAGACAACTGGAAATTTCCTGCCAATTTAGTCTAAGGAGATAGTCTATTTGTTCAAT-GTACGCTACTCTGTTTCCAC i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168550688 182 - 198365852 AGCAATCAATAAAGAA------GAGAGAAGGATTTAGATTGTTTTACTTTATTTTTCCAATTTTTGCTAAGGATATATTTCTCAGTTACTGCTTCCTATGTCTGCCCATCAAAGACAACTGGAAATTTCCTGCCAATTCAATCTAAGGAGATGGTCTATTTATTCAGT-GTCCACCACTCTGTTTCcac i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162215158 182 - 192294377 AGCAATCAATAAAGAA------GAGAGAAGGATTTAGATTGTTTTACTTTATTTTTCTAATTTTTGCTAAGGATATATTTCTCAGTTACTGCTTCCTATGTCTGCCCATCAAAGACAACTGGAAATTTCCTGCCAATTCAATCTAAGGAGATGGTCTATTTATTCAGT-GTCCACCACTCTGTTTCcac i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150898750 182 - 180432695 agcaatcaataaagaa------gagagaaggatttagattgttttactttatttttccaatttttgctaAGAATATATTTCTCAGTTATTGCTTCCTATGTCTGCCCATCAAAGACAACTGGAAATTTCCTGCCAATTCAATCTAAGGAGATGGTCTATTTATTCAGT-GTCCACCACTCTGTTTCCAC i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14999752 182 - 90373283 AGTAATCAATAATGAA------GAGAGAAGGATTTAGATTGTTTTACTTTATTTTTCCAATTTTTACTGAGAATATATTTCTCAGTTACTGCTTCCTATGTCTGCCCATCAAAGACAACTGGAAATTTCCTGCCAATTCAATCTAAGGAGATGGTCTATTTATTTAGT-GTCCACTACTCTGTTTCcac i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21928136 182 + 50472720 aGGAATCAATAAAGAA------GAAAGAATGATTTAAACTGTTTTTCTTTATTTTTCCAATTGTTGCTAAGAATATATTTCTCAGTTACTGCTTCCTATGTCTGCCCAACAAAGACCACTGGAAACTTCCTGCCAATTTTATCTAAGGAGATGGTCTATTTGTTCAAT-GTACACTGCTCTGTTTCCAC i calJac3.chr21 C 0 C 0 s canFam3.chr31 13816296 174 + 39895921 atgaataaataaataaaatcttaaaaaaTATATTTA---TGCTTCTCTTTATTTTTCCTATTTTTACTAAGAATATAATTCTCAGTTCCTGCTTTCTATACCC--------AAGGCAGCTGAAAATTTCCTCCCACTTTAATCTGGGGAAAT----TATTCATTCAGTGGTACTCTATTCTGTTTCCAC i canFam3.chr31 I 150 I 423 e mm10.chr16 78111286 3887 + 98207768 I a score=359290.000000 s hg38.chr21_KI270874v1_alt 61989 110 + 166743 accaaatggtctcacatcaattgggcatattgcatttcagttacaacacta----agttatcatcagactccacaggattaagggctgaattttgcacaggattgctctcactg s panTro4.chr21 3674852 110 + 32799110 accaaatggtctcacatcaattgggcatattgcatttcagttacaacacta----agttatcatcagactccacaggattaagggctgaattttgcacaggattgctctcactg i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16927151 110 + 48394510 ACCAAATGGTCTCacatcagttgggcatattgcatttcaattataacacta----agttatcgtcagactccacaggattaagggctgaattttgcacaagattgctctcactg i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4437575 110 + 32716333 ACCAAATGGTCTAacatcaattgggcatattgcatttcaattacaacacta----agttaccatcagactccacaggattaagggctgaattttgcacaagattgctctcactg i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168550870 110 - 198365852 accaaatcgtctaacatcaattgggcatattgcgtttcaattacaacatta----agttatcctcagactccacaggattaagggctgaattttgcacaagattgctctcactg i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162215340 110 - 192294377 accaaatcgtctaacatcaattgggcatattgcgtttcaattacaacatta----agttatcgtcagactccacaggattaagggctgaattttgcacaagattgctctcactg i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150898932 110 - 180432695 ACCAAATCGTCTAACATCAATTGGGCATATTGCGTTTCAATTACAACACTA----AGTTATCGTCAGACTCCACAGGATTAAGGGCTGAATTTTGCACAAGATTGCTCTCACTG i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 14999934 110 - 90373283 accaaatcatctaacatcaattggacatattgcgtttcaattacaacacta----agttatcgtcagactccacaggattaagggctgaattttgcacaagattgttctcactg i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21928318 88 + 50472720 CCCAAATGGTCTAACAT-AACGGGGCATATTGCATTTCAATTACAACACTA----GGTTATCATCAGAC---------------------TTTTGCACAAGATTGCTCTCACTG i calJac3.chr21 C 0 I 18 s canFam3.chr31 13816893 113 + 39895921 acaAAATGGTCTAATACCAAATGAATATATTGTaattcatttatgacacgaagttagttagcatcagacttcacagt-ttaaggactcagttttccacaagactgctctcactt i canFam3.chr31 I 423 C 0 e mm10.chr16 78111286 3887 + 98207768 I a score=118457.000000 s hg38.chr21_KI270874v1_alt 62099 48 + 166743 tagatgccagctgctagactttggggatcctcaagtcacctgcacttc s panTro4.chr21 3674962 48 + 32799110 tagatgccagctgctagactttggggatcctcaagtcacctgcacttc i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16927261 48 + 48394510 tagatgccagctgctagcctttggggatcctcaagtcacctgcacttc i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4437685 48 + 32716333 tagatgccagctgctagcctttggggatcctcaagtcacctgcacctc i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168550980 45 - 198365852 tagatgctagctgctagtctttgggga---tcaagtcacctgcacttc i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162215450 45 - 192294377 tagatgctagctgctagtctttgggga---tcaagtcacctgcacttc i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150899042 48 - 180432695 TAGATGCTAGCTGCTAGTCTTTGGGGATCCTCAAGTCACCTGCACTTC i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15000044 41 - 90373283 taga-------tggtagtctttggggatcctcaagtcacctgcacttc i chlSab2.chr2 C 0 C 0 s canFam3.chr31 13817006 48 + 39895921 caaaggcaagctgcaaatctctgagggtccaccaggcacctgtacttc i canFam3.chr31 C 0 C 0 e calJac3.chr21 21928406 18 + 50472720 I e mm10.chr16 78111286 3887 + 98207768 I a score=1631559.000000 s hg38.chr21_KI270874v1_alt 62147 521 + 166743 tgaccaattggttattaattcaggaagtccccat----------------------------------------------------------------------------------------------------------------------gacATACATAAGAGGACTAGACAAA-GATATTGAAATggcaaggtctggcaggggatacagagcctctatgacatctcccatggagtcagggcacatcaccctcacagcacatc----tatttgccaaccaagcagctcccctgaacttcggcattcagagtttttattagagtttcatgttttt---------------------------aagcgagactgattaaatcattggccatgtgattaaacataattttcaatccccctttcctctcttgaggtcaggctggcc---------------------------------tttctgatggccagcccccatttcgaagctatctaggggcccatcatgtgttgcaccatatcagcataacaaagacattcttatacttcatgaaat------------tgtaagg-------attttaggagctccatgccaagaactcaggacagagaccaaa-------tTCTTTATAATACTACA----------TGTTCTTGGTGCCTTTGATTAACTGTGTGAAACACAACCTGTTCCCACCATTGCCTATTGTCTA s panTro4.chr21 3675010 521 + 32799110 tgaccaattggttattaattcaggaagtccccat----------------------------------------------------------------------------------------------------------------------gacATACATAAGAGGACTAGACAAA-GATATTGAAATggcaagatctggcaggggatacagagcctctatgacatctcccatggagtcagggcacatcaccctcacagcacatc----tatttgccaaccaagcagctcccctgaacttcagcattcagagtttttattagagtttcatgtattt---------------------------aagcgagactgattaaatcattggccatgtgattaaacataattttcaatccccctttcctctcttgaggtcaggctggcc---------------------------------tttctgatggccagcccccattttgaagctatctaggggcccatcctgtgttgcaccatatcagcataacaaagacattcttataattcatgaaat------------tgtaagg-------attttaggagctccatgccaagaactcaggacagagaccaaa-------tTCTTTATAATACTACA----------CGTTCTTGGTGCCTTTGATTAACTGTGTGAAACACAACCTGTTCCCACCATTGCCTATTGTCTA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16927309 517 + 48394510 tgaccaattgtttataaattctggaagtccccat----------------------------------------------------------------------------------------------------------------------gacATACATAAGAGGAccagacaaa-gagatttaaatggcaagatctggcaggggatacagagcctctatgacatctcccatggagtcagggcacaacaccctcacagcacatc----tgtttaccaaccaagcagctcccctgaactttggcattcagagtttttatt--agtttcatgtactt---------------------------aagcgagactgattaaatcattgaccatgtgattaaacataattttcaat-cccctttcctctcttgaggtcaggctggcc---------------------------------tttctgatggccaacccccattttgaagctatctaggggcccatgatgggttgcactatatcagcgtaacaaagacattcctataattcatgaaat------------tgt-agg-------attttaggagctccatgccaagaactcaggacagagaccaaa-------tTCTTTATAATACTACA----------TGGTCTTGGTGCGTTTGATTAACTGTGTGAAACACAAGTTGTTCCCACCATTGCCTATTGTCTG i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4437733 521 + 32716333 tgaccaattggttattaattcaggaagtccccat----------------------------------------------------------------------------------------------------------------------gacATACATAAGAGGACTAGACAaa-gagatttaaatggcaagatctggcaggagatacagagcctctatgacatctcccatggagtcagggcacatcaccctcacagcacatc----tgtttaccaaccaagcagctcccctgaactttggcattcagagtttttattagagtttcacatactt---------------------------aagcaagactgattaaatcattggccatgtgattaagcataattttcaatccccctttcctctcttgaggtcaggctggcc---------------------------------tttctgatggcccacccccatttcaaagctatctaggggcccatgatgagctgcaccatatcagcgtaacaaagacattcctataattcatgaaat------------tgtaagg-------aatttaggagctccatgccaagaactcaggacagagaccaaa-------tTCTTTATAACACTATA----------TGGTCTTGGTGCCTTTGATTAACTGTGTGAAACACAACCTGTTCCCACCATTGCCTATTGTCTA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168551025 521 - 198365852 tgaccaattagttattgattcagaaagtccccat----------------------------------------------------------------------------------------------------------------------gacATACATAAGAGGACTAGACAaa-gagatttaaatggcaaggtctggcaggggatatagagcctctgtgacatctcccatggagtcagggcacatcaccctcacagcacatc----tgtttcccaaccaagcatctcccctgacctttggcattcagagtttttattagaccttcatgtactt---------------------------aagcaagactgattaaatcattggccatgtgattaaacataattttcaatccccctttcctctcttgaggtcaggctggcc---------------------------------tttctgatagccaacccccatttcgaagctatctaggggcccatcatgagtcacaccgtatcagtgtaacaaagacattcctataattcatgaaat------------tgtaagg-------gttttaggagctccgtgccaggaactcaggacagagactaaa-------tTCTTTATACTACTACA----------TGCTCTTGGTGTCTTTGATTAACTGTGTGAAACACAAGCTGTTCCCATCATTGCCTACTGTCTA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162215495 521 - 192294377 tgaccaattagttattgattcagaaagtccccat----------------------------------------------------------------------------------------------------------------------gacATACATAAGAGGACTAGACAaa-gagatttaaatggcaaggtctggcaggggatacagagcctctgtgacatctcccatggagtcagggcacatcaccctcacagcacatc----tgtttcccaaccaagcatctcccctgacctttggcattcagagtttttattagaccttcatgtactt---------------------------aagcaagactgattaaatcattggccatgtgattaaacataattttcaatccccctttcctctcttgaggtcaggctggcc---------------------------------tttctgatagccaacccccatttcgaagctatctaggggcccatcatgagtcacaccatatcagtgtaacaaagacattcctataattcatgaaat------------tgtaagg-------gttttaggagctccgtgccaggaactcaggacagagactaaa-------tTCTTTATACTACTACA----------TGCTCTTGGTGTCTTTGATTAACTGTGTGAAACACAAGCTGTTCCCATCATTGCCTACTGTCTA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150899090 521 - 180432695 TGACCAATTAGTTATTGATTCAGGAAGTCCCCAT----------------------------------------------------------------------------------------------------------------------GACATACATAAGAGGACTAGACAAA-GAGATTTAAATGGCAAGGTCTGGCAGGGGATACAGAGCCTCCATGACATCTCCCATGGAGTCAGGGCACATCACCCTCACAGCACATC----TGTTTCCCAACCAAGCATCTCACCTGACCTTTGGCATTCAGAGTTTTTATTAGACTTTCACGTACTT---------------------------AAGCAAGACTGATGAAATCATTGGCCATGTGATTAAACATAATTTTCAATCCCCCTTTACTCTCTCGAGGTCAGGCTGGCC---------------------------------TTTCTGATAGCCAACCCCCATTTCGAAGCTATCTAGGGGCCCATCATGAGTCACATCATATCAGTGTAACAAAGACATTCCTATAATTCATGAAAT------------Tgtaagg-------gttttaggagctccgTGCCAGGAACTCAGGACAGTGACTAAA-------TTCTTTATAATACTACA----------TGCTCTTGGTGTCTTTGATTAACTGTGTGAAACACAAGCTGTTCCCATTATTGCCTATTGTCTA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15000085 533 - 90373283 tgaccaattagttattgattcaggaagtccccat----------------------------------------------------------------------------------------------------------------------gaccTACATAAGAGGACTAGACAaa-tagatttaaacggcaaggtctggcaggggatacagagcctctatgacatctcccatggagtcagggcacatcaccctcacagcacatc----tgtttcccaaccaagcagctcccctgacctttggcattcagagtttttattagactttcacgtactt---------------------------aagcaagactgattaactcattggtcatgtgattaaacataattttcaatccccctttcctctcttgaggtcaggctggcc---------------------------------tttctgatagccaacccccattttgaagctatctaggggcccatgatgagtcacaccatatcagtttaacaaagacattcctataattcatgaattataatgaattcatgtaaga-------gttttaggagctccgtgccaggaactcaggacagagactaaa-------tTCTTTATAATACTACA----------TGCTCTTGGTGTCTTTGATTAACTGTGTGAAACACAAGCTGTTCCCACCATTGCCTATTGTCTA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21928424 587 + 50472720 TAAACATTTggttactaactcaggaggtccccatgacctcccttaggttctataataaaaactagaacaacacacagaaattagggaagtgctatt------------------------------tttattactaaagttttattttaaaggacatacataaaagaactagacaag-gagatttaaatggcaaggtctggcaagagatacagagcctctatgacatcccccatggagtcagggcacatcaccctcatagcacatc---------------------gctccattgagctttggtattcagg--ttttattagagttttatgtactt----------------------------agcaagacttattaa-tcattggccatgcaattaaacttaatttttaatccccctttcctctcctgaggtcaggcaggcc---------------------------------tttctgatggccaaagcccatttcgaag----ctaagggcccatcatgagtcacaccatatcagtgtaacaaagacattcctataattcatgaaat------------tgtaaga-------gttttaagagctccctgccaggaacccaggacaaagaccaaa-------tTCTTTATAATACTACACATGCCTACCTGGTATTTGTGCCTTTGATTGACC-------ACACAAGCTGCTCCCACCATTGCCTACTGTTTA i calJac3.chr21 I 18 C 0 s canFam3.chr31 13817054 685 + 39895921 tgatcaactggcttccaactcaggaggtccccac--------------------------------gatcccctccctctttaataattcattaaaacaactcacagaacttaggaaagtgctatacttatgattaccattttattaaaaaggatacccatatgagaaccagacaaatgagattcatggagcaaggtctagaagggcatgcagaacttgcatgctatccctcatggaatcagggcatgtcacccttctggcgcatctatgtgttcaccaaccaagaaactccactgggtttcaatattcagagtttttattggggtttctttttttttttttttttattggggtttctttacacaggcatgactgattaaat-attggccacatgactgaacccaatcttcaactatcctctcctcccctgaggtcaggctgacccaaagtcacaaatttctaatcacatagttggttcttctgatgaccagcctgcaacctgaagctatttagggacccatcatgagttacagc--attagcataataaagatattcttatcactcaggagat------------tccaaggggttttagttttaggagctccctgccaggaacaccagacaaaaaccagacaattttttttTTACCTTACTGCACATGCCTAACTGGTTCGGGTGCCTTTGAGTAGCC-------ACACAAGCTACTCTCA-CATTTCCTGTTGTCTA i canFam3.chr31 C 0 I 189 e mm10.chr16 78111286 3887 + 98207768 I a score=24122.000000 s hg38.chr21_KI270874v1_alt 62668 8 + 166743 TTATCTAA s panTro4.chr21 3675531 8 + 32799110 TTATCTAA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16927826 8 + 48394510 TTATCTAA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4438254 8 + 32716333 TTATCTAA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168551546 8 - 198365852 GTATCTAA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162216016 8 - 192294377 GTATCTAA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150899611 8 - 180432695 GCATCTAA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15000618 8 - 90373283 GTATCTAA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21929011 8 + 50472720 CTATCTAA i calJac3.chr21 C 0 C 0 s canFam3.chr31 13817928 8 + 39895921 CCATTTAA i canFam3.chr31 I 189 C 0 e mm10.chr16 78111286 3887 + 98207768 I a score=933956.000000 s hg38.chr21_KI270874v1_alt 62676 285 + 166743 --------------------------------------------------------------------TCAATAAGATCAAG-------------Cata------tgactttactcatgcaggaaattctttcccaataagataaagttgc-------------------------aactaaTACACAGTTCAACTAGCTTCCTCTCAAAATAATAGATTGTTTATCAGTGTAAATGAGTCTTCCTGTGGACAATATACAACTCAAA-AGGCCAAATTACTTGTTTATCAAATGAC----taattatcaagacttactttaaaaccctcaccttgatgtgtcaactaatcctaaactattacatcttgcacattgtccaattccaacaaccgccattattaa s panTro4.chr21 3675539 285 + 32799110 --------------------------------------------------------------------TCAATAAGatcaag-------------cata------ggactttactcgtgcaggaaattctttcccaataagataaagttgc-------------------------aactaaTACACAGTTCAACTAGCTTCCTCTCAAAATAATAGATTGTTTATCAGTGTAAATGACTCTTCCTGTGGACAATATACAACTCAAA-AGGCCAAATTACTTGTTTATCAAATGAC----taattatcaagacttactttaaaaccctcaccttgatgtgtcaactaatcctaaactattacatcttgcacattgtccaattccaacaaccgccattattaa i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16927834 283 + 48394510 --------------------------------------------------------------------TCAACAAGATCAAG-------------Cata------tgactttacttgtgcaggaaactctttcccaataagataaagttgc-------------------------aactaaTACACAGTTCAACTAGCTTCCTCTCAAAATAATAGGTTGCTTATCAGTGTAAATGACTCCTCCTGTGGACACTATACAACTCAAA-AGGCCAAATTACTTGTTTATCAAATGAC----taattatcaagacttactttaaaaccctcacctaatcctat--actaatcctaaactattacatcttgcacattgtccaattccaacaaccgccattattaa i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4438262 285 + 32716333 --------------------------------------------------------------------TCAACAAGatcaag-------------cata------tgactttactcatgcaggaaattctttcccaataagacaaagttgc-------------------------aactaatacacagttcaactggcttcctctcaaaataataggttgcttatcagtgtaaatgactcttcctgtggacaatatacagctcaaa-aggacaaattacttgttcatcaaatgac----taattatcaagacttactttaaaaccttcaccttgatgtgtcaacaaatcctaaactattacatcttgcacattgtccaattccaacaactgccgttattaa i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168551554 289 - 198365852 --------------------------------------------------------------------CGAATAGGATCAAG-------------Cata------tgactttactcatacaggaaattctttcccagtaagataaagctgc-------------------------aactaaTACACAGTTCAACTAGCTTCCTTTCAAAATAATAGGTTGCTTATCAGTGTCAATGACTCCTCCTGTGGACAATACACAGCTCAAA-AGGCCAAATTActtgtttatcaaacgactaattaattatcaagccttactttgaaaccctcaccttgatgtgtcaactaatcctaaactattacatcttgcacactgtccaattccaacaacccccattattaa i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162216024 289 - 192294377 --------------------------------------------------------------------CTAATAGGATCAaa-------------cata------tgactttactcatacaggaaattctttcccagtaagataaagctgc-------------------------aactaatacacagttcaactaacttcctttcaaaataataggttgcttatcagtgtaaatgactcctcctgtggacaatacacagctcaaa-aggccaaattacttgtttatcaaatgactaattaattatcaagccttactttgaaaccctcaccttgatgtgtcaactaatcctaaactattacatcttgcacattgtccaattccaacaacccccattattaa i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150899619 289 - 180432695 --------------------------------------------------------------------CTAATAGGATCAAA-------------CATA------TGACTTTACTCATACAGGAAATTCTTTCCCAGTAAGATAAAGCTGC-------------------------AACTAATACACAGTTCAACTAGCTTCCTTTCGAAATAATAGGTTGCTTATCAGTGTAAATGACTCCTCCTGTGGACAATACACAGCTCAAA-AGGCCAAATTACTTGTTTATCAAATGACTAATTAATTATCAAGCCTTACTTTGAAACCTTCATCTTGATGTATCAACTAATCCTAAACTATTACATCTTGCACATTGTCCAATTCCAACAACCCCCATTATTAA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15000626 285 - 90373283 --------------------------------------------------------------------CTAATAGGATCAAG-------------Cata------tgactttactcatacaggaaattctttcccagtaagataaagctgc-------------------------aactaacACACAGTTCAACTAGCTTCCTCTCAAAATAATAGGTTGCTTATCAGTGTAAATGACTCCTCCTGTGGACAATACACAGCTCAAA-AGGCCAAATTActtgtttatcaaatgac----taattatcaagccttactttaaaaccctcaccttgatgtgtcaactaatcctaaactattacatcttgtacattgtccaattccaacaaccgccattattaa i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21929019 302 + 50472720 --------------------------------------------------------------------CTAATAGGATCAAG-------------CATA------TGACTTTACTCGTGAAGGAAATTCTTTTTCAGTAAGATGAAGTCGCAAAAGTCTTGAAAATCCATTTAGTGAACTAATAAGCTATTCAACTAGCTTCCTCTCAAAATGATAGGTTGCTTATTGGTGTAAATGACTCCTCGGGTGGACAATATACAGCTCAAA-TGACCAAATTACTTGTTTATCAAATGAC----taattatcaagacttactttaaaaccctcaccttgatgtgtcaactaaccctaaactattac-------acattgtccagttccaacaacc-ccatcattaa i calJac3.chr21 C 0 I 2056 s mm10.chr16 78115173 271 + 98207768 --------------------------------------------------------------------TCAACAGGAT-------------------TG------TTATCTTCCTATTGAAGAGAAAATTTACCCAGTAAAAT--CGTTGCAAGCATCTG----------------AAATTCCACGCTATTTAATTAGCTCCTC----AAATACT----------CCCAAGCAAGTAGCTTCTCTTGAGAAGA--GAACAGCTCAAATGGGGTGAATTGCTTGCTTCCCCCAAGGTTTG-TAATGATCAAGATTTACTTCTAAACCTTCACCTTGGTGTAACCACTATTACTAAACTGGGAAATTGTATACATTTCCCTATTCCAACTACACCAACTAT--- i mm10.chr16 I 3887 C 0 s canFam3.chr31 13817936 397 + 39895921 TCAATTAAACAATCTCTGTGGCCTAATGAATTTATGCCTTGAGAGACAAGCTGCCTACAACTAACTTCTTAATGGGATCAAGAACCAAGATTGTTCATATGAACTTGACTTTACTATAGCAGGAAATTTTTGTAAAATTAGGTAAAGTTGTAGAAATCCTGAAAATCCATTCATCCAAATAGCCAACTATTCAACCAGCCTCCTCTCAAAAGAAT----TGTTCATCAGAATAAATAGCTCCTCCTATGGACAACACATAATTCAAA-AGGATCGATTACTTGGCTATTAAATGACTCTCTATGTatctaaacttactgcaaaactctcactttgctatgcttactcatcttaaattattatatcatgagggctgttcaatcccaattaaccccatcaatga i canFam3.chr31 C 0 C 0 a score=195293.000000 s hg38.chr21_KI270874v1_alt 62961 72 + 166743 aagacacacctaaagccatatgccaaaggcttataattacatgtctttaatctccctctttccaagatacga s panTro4.chr21 3675824 72 + 32799110 aagacatacctaaagccatatgccaaaggcttataattacatgtctttaatctccctctttccaagatacga i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16928117 72 + 48394510 aagacatacctaaagccataccccaaaggcttataattacatgtctttaatctccctctttccaagatacaa i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4438547 72 + 32716333 aagacatacctaaagccataccccaaaggcttataattaaatgtctttaatctccctcttttcaagatacaa i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168551843 72 - 198365852 aagacatagctaaagccataccccaaaggcttataattatatgtctttaatcgccctctttccaatatacaa i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162216313 72 - 192294377 aagacatagctaaagccataccccaaaggcttataattatatgtctttaatcgccctctttccaatatacaa i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150899908 72 - 180432695 AAGACATAGCTAAAGCCATACCCCAAAGGCTTATAATTATATGTCTTTAATCGCCCTCTTTccaatatacaa i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15000911 72 - 90373283 aagatgtagctaaagccataccccaaaggcttctaattatatgtctttaatctccctctttccaatatacaa i chlSab2.chr2 C 0 C 0 s mm10.chr16 78115444 64 + 98207768 -------ATATATATCCAGGCTACAAAATGTTGTAAGTCTATGACCTTCATTTCTC-CAACCTAAGATATTA i mm10.chr16 C 0 I 1 s canFam3.chr31 13818333 71 + 39895921 aagacct-cctaaaaccagaccccaaattcttataaacacctgcccttaatctctcctcttttaaaatacta i canFam3.chr31 C 0 I 191 e calJac3.chr21 21929321 2056 + 50472720 I a score=1419645.000000 s hg38.chr21_KI270874v1_alt 63033 481 + 166743 taaaattctttcaagaagatggtctttcttactgcagaataataa-----actttgctaaatcaatttattatttcagtggtcttttcaaggagctggcCATCAATAATAGCCACTGAAACTTTTCTTTCTGTAAAACTC-CAAAAGGGTAGCCCTTC---------TCCCC--------TTGACCTAGCTTTCT-------AGAAAAG----ATTCTGATATGGAATATTGCtgatactcagactactgctatttctgtgatcaggaaactgtcctttctctctgacccaggagtctagtacctactgatg------------aaactgta--ag----------acta---tttaagcttgcaggtaaggtaaaatcttagacccttcacagttcttgataATCTATTATATTAGAAAACAGGAATTAAAAATTTCTAGGTAATTTCATATGAGTGATTCTACTCTTAGGTGTCTATTTTATATGAAAAGACAAAATAGAAAATGGATTTGACACAAATCCATTA---AGCTTAACTTTTAGT s panTro4.chr21 3675896 481 + 32799110 taaaattctttcaagaaggtggtctttcttactgcagaataataa-----actttgctaaatcaatttattatttcagtggtcttttcaaggagttggcCATCAATAATAGCCACTGAAACTTTTCTTTCTGTAAAACTC-CAAAAGGGTAGCCCTTC---------TCCCC--------TTGACCTAGCTTTCT-------AGAAATG----ATTCTGATATGGAATATtgctgatactcagactactgctatttctgtgatcaggaaactgtcctttctctctgacccaggagtctaatacctactgatg------------aaactgta--ag----------acta---tttaagcttgcaggtaaggtaaaatcatagacccttcacagttcttgataATCTACTATATTAGAAAACAGGAATTAAAAATTTCTAGGTAATTTCATATGAGTGATACTACTCTTAGGTGGCTATTTTATATGAAAAGACAAAATAGAAAATGGATTTGACACAAATCCATTA---AGCTTAACTTTTAGT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16928189 481 + 48394510 taaaattctttcaagaaggtggtctttcttactgcagaataataa-----actttgctaaatcaatttattatttcagtggtcttttcaaggagttggcCATCAATAATAGCCACTGAAACTTTTCTTTCTGTAAAACTC-CAAAAGGGTAGCTCTTC---------TCCCC--------TTGACTTAGCTTTCT-------AGAAATG----ATTCTGATATGGAATATtgctgatactcagactactgctatttctgtgatcaggaaactgtcctttctctctgacccaggagtctagtacctactgatg------------aaactgta--ag----------acta---tttaagcttgcaggtaaggtaaaatcttagacccctcacagttcttgataATCTATTATATTAGAAAACAGGAATTAAAAATTTCTAGGTAATTTCATATGAGTGATACTACTCTTAGGTGGCTCTTTTATATGAAAAGACAAAATAGAAAATGGATTTGACACAAATCCATTA---AGCTTAACTTTTAGT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4438619 481 + 32716333 taaaattctttcaagaaggtggtctttcttactgcagaataataa-----actttgctaaatcaatttattatttcagtggtcttttcaaggagttggcCATCAATAATAGCCTCTGAAACTTTTCTTTCTGTAAAACTC-CAAAAGGGTAGCCCTTC---------TCCCC--------TTTACCTAGCTTTAT-------ATAAATG----ATTCTGATATGGAATATtgctgatactcagactactgctatttctgtgagcaggaaactgtcctttctctctgacccaggagtctagtacctactgacg------------aaactgta--ag----------acta---tttaagcttgcaagtaaggtaaaatcttagacccttcacagttcttgataATCTATTATATTCGAAAACAGGAATTAAAAATTTCTAGGTCATTTCATATGAGTGATACTACTCTTAGGTGGCTCTTTTATATGAAAGGACAAAATAGAAAATGTATTTGACACAAATCCATTA---AGCTTACCTTTTAGT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168551915 479 - 198365852 taaaattctttcaagaaggtggtctttcttactgcag-ataataa-----gctttgctaaatcaatttattatttcagtggtcttttcaaggagttggcCATCAATAATAGCCACTGAAACATTTCTTTCTGTAAAACTC-CAAAAGGGTAGCCCTTC---------TCCCC--------TTGACCTAGCTTTCT-------AGAAATG----ATTCTGACATGGAATATtgctaatactcagacgactgctatttctgtgggcaggaaactgtcctttctctctga-ccaggagtctagtacctactgatg------------aaaccata--ag----------acta---tttaagcttgcgagtaaggtaaaatcttagacccttcacagttcttgaTCATCTGTTATATTAGAAAACAGGAACTAAAAATTTCTAAGTGATTTCATATGAGTGATACTACTCTTAGGTGGCTCTTTAATATGAAAGGACAAAATAGAAAATGGATTTGACACAATTCCATTA---AGCTTAACTTTTACT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162216385 479 - 192294377 taaaattctttcaagaaggtggtctttcttactgcag-ataataa-----gctttgctaaatcaatttattatttcagtggtcttttcaaggagttggcCATCAATAATAGCCACTGAAACATTTCTTTCTGTAAAACTC-CAAAAGGGTAGCCCTTC---------TCCCC--------TTGACCTAGCTTTCT-------AGAAATG----ATTCTGACATGGAATATtgctaatactcagacgactgttatttctgtgggcaggaaactgtcctttctctctga-ccaggagtctagtacctactgatg------------aaaccata--ag----------acta---tttaagcttgcgagtaaggtaaaatcttagacccttcacagttcttgaTCATCTGTTATATTAGAAAACAGGAACTAAAAATTTCTAAGTGATTTCATATGAGTGATACTACTCTTAGGTGGCTCTTTAATATGAAAGGACAAAATAGAAAATGGATTTGACACAATTCCATTA---AGCTTAACTTTTACT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150899980 479 - 180432695 taaaattcttTCAAGAAGGTGGTCTTTCTTACTGCAG-ATAATAA-----GCTTTGCTAAACCAATTTATTATTTCAGTGGTCTTTTCAAGGAGTTGGCCATCAATAATAGCCACTGAAACATTTCTTTCTGTAAAACTC-CAAAAGGGTACCCCTTC---------TCCCC--------TCGACCTAGCTTTCT-------AGAAATG----ATTCTGACATGGAATATTGCTCATACTCAGATGACTGCTATTTCTGTGGGCAGGAAACTGTCCTTTCTCTCTGA-CCAGGAGTCTAGTACCTGCTGATG------------AAACCGTA--AG----------ACTA---TTTAAGCTTGCGAGTAAGGTAAAATCTTAGACCCTTCACAGTTCTTGATCATCTGTTATATTAGAAAACAGGAACTAAAAATTTCTAAGTGATTTCATATGAGTGATGCTACTCTTAGGTGGCTCTTTAATATGAAAggacaaaatagaaaatggatTTGACACAATTCCATTA---AGCTTAACTTTTACT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15000983 480 - 90373283 tgaaattatttcaagaaggtggtctttcttactgcagaataataa-----gctttgctaaatcaatttattatttcagtggtcttttcaaggagttggcCATCAGTAATAGCCACTGAAACATTTCTTTCTGTAAAATTC-CAAAAGGGTAGCCCTTC---------TCCCC--------TTGACCTAGCTTTCT-------AGAAATG----ATTctgacatgaaatattgctgatactcagatgactgctatttctgtgcgcaggaaactgtcctttctctctga-ccaggagtctagtacctactgatg------------aaaccata--ag----------acta---ttttagcttgcaagtaaggtaaaatcttagacccttcacatttcttgaTCATCTATTATATTAGAAAACAGGAATTAAAAATTTCTAAGTAATTTTATATGAGTGATACTACTCTTAGGTGGCTCTTTTATATGAAAGGACAAAACAGAAAATGGATTTGACACAATTCCATTA---AGCTTAACTTTTACT i chlSab2.chr2 C 0 C 0 s mm10.chr16 78115509 478 + 98207768 TAAGATTCGTTTAGAAAGCCAATCTCCATTTCTGCAG---AATTC-----AATTTGCTTACTCGGT---TTATTTCAACGGCACTTTGAAGAAAGTGAGCACCACCAGTAGCCTTGGAAACCTCATTCCTTCTAGGATTCTTATCAGGATAAGTTTCCGAATATTGACCAGT--------TTGACCTGGTTTCCCCCCCCAAAAAAATATAATATTCtgatatgttatattgttagtg---ag-------------ctgtgaacaataatctaccctt--tctctgacccaggagtct-gtgtcttcagatgactttaaaaaaaaaattaca--aagttatagtctacca---tcttagcttgcatgaagcataaaaccttaggccctccatagctcttgacaAGCTGTTACATTAGAAATGTAGAA----------------------ATGTGTGTGATAATATTCATAACTGGT--ATTTATCAGGAAGGGCCAAAGAGAAAACTGGCTTGAAAAATATCCATTAATCAGCCTAACTTTTAGT i mm10.chr16 I 1 I 538 s canFam3.chr31 13818595 494 + 39895921 taagattctgtcaaaaagatggcctcccttactggaaaataataaacttcactttgcttaaccaacatatcatttcagtggtcttttcaggaagttggcCATCAGTAATGGCCACTGAAACTTTTCTTTCTGTAAGATTCAGATAAGGGTAGCCCTTC---------CCATCTAGCCAATTTGATCTAGCTGCC--------AGAATTG----ATTCTGATATGGGATGTGGatgatcctcctgccactgctatttctgtgagtaataaa-----------ctttgacccaggagtcttgcatcttctgacagcatttaca---aaactgtggtag----------gctaacttcttatcttgcaagcagggtaaaatcttacaattgtcacagttcttgacaACCTATTATATTAGAGAGTAGAAATAAAGGATTTCTAGATAACGACGGGTGA---ATAATCCTCTGAGGTGGCTCTTTTATAAGAAAGAACAAAATAGAAAGTGAAATTGACAAAAATCCATTA---AACTTAACTTTTAGT i canFam3.chr31 I 191 C 0 e calJac3.chr21 21929321 2056 + 50472720 I a score=30510.000000 s hg38.chr21_KI270874v1_alt 63514 19 + 166743 AGCGTTAGATCTTTTAA-TT s panTro4.chr21 3676377 20 + 32799110 AGCGTTAGATCTTTTAATTT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16928670 19 + 48394510 AGCATTAGATCTTTTAA-TT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4439100 19 + 32716333 AGAGTTAGATCTTTTAA-TT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168552394 17 - 198365852 GGAGTCAGATCTTTTAA--- i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162216864 17 - 192294377 GGAGTCAGATCTTTTAA--- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150900459 17 - 180432695 GGAGTCagatcttttga--- i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15001463 17 - 90373283 GGAGTCAGATCTTTTAA--- i chlSab2.chr2 C 0 C 0 s canFam3.chr31 13819089 19 + 39895921 GGAATTGGATATTTGAT-TT i canFam3.chr31 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78115987 538 + 98207768 I a score=2266923.000000 s hg38.chr21_KI270874v1_alt 63533 970 + 166743 TTTTTTATCCTATGATTCCATTTATCTTGAGCTTATCATTCATTTGGTCCTTGGCTTTTGGTCTTTGTTTAGGGGCTGCAGAGGCTTCACTGGTTCATTTCTTTCCTTGGTGACATTGTCCAAAGACCAGGTGGTAGTCAGGTTTTTAGGTAGATTGCTGGACTCAGTATTATTCTGCAGCCCATAAGAAGAAATACTGTTTTTATCTCCTAGGTCACTAAAGGCATCTAAGTGTCTTGGTTGATTCTTCTGAACTAAGCCACTTAGTTCATTGAGTCTCTCCTTTCTGCAGGTAAGATGTCAATATTTACCCTCCTGATTGTGGCTAGTGACCACACAGTATTACTCATGCATGGTTTCTAGGCATGGCCTTTCAGACTGGCAGGTAACTTCAAGGGACCCATGACTATGGCTTTTGCTTCGAACAAACATTTTTCTTCATTCATTACATACATCCCACAGCCCTTGAACAGTGTGATTGGGGGTGGGTCAC-TCATGATTTCATTCTGTCTTTCTAGAAACCACTATAACAACAGATTTGGATTTAGAGTAATCACTTTTAATGTTATTTTTGGAAAACTTTGTCTTTGTAGCCTTCAAAAACAAGATTTGGTGCTTTACATTAGACTGTTTTGGGATGCTCCTCACAGAGGGTCTTTCTTCAGGACTTCCGTTCTGCACTGTTATTATCAGTTCTGCCAGCTCTGGGCTATAATCTATTGGTATCTCTGGCAGCTTTTCTTCAATAATTTCATAAACTAAAGAATTGGTATTTTTACATTGAAAGTATGCTTTGGGTGACCATTTCACAAACACAGCATCCCAGAGTCCAAACATCAGACTTATAGCTCTAGTGTTTGTTTGAGAATAATTGAGGACTCATGTAGTAAGGTGTGCCAGTGAGGGTACTAACCATGTCACAGTTGCTATAGTGATCCAGGGTGGGGCACTGCCCTCAGACACTTGATTT s panTro4.chr21 3676397 971 + 32799110 TTTTTTATCCTATGATTCCATTTATCTTGAGCTTATCATTCATTTGGTCCTTGGCTTTTGGTCTTTGTTTAAGGGCTGCAGAGGCTTCACTGGTTCATTTCTTTCCTTGGTGACATTGTCCAAAGACCAGGTGGTAGTCAGGTTTTTAGATAGAGTGCTGGACTCAGTATTATTCTGCAGCCCATAAGAAGAAATACTGTTTTTATCTCCTAGGTCACTAAACGCATCTAAGTGTCTTGGTTGATTCTTCTGAACTAAGCCACTTAGTTCATTGAGTCTCTCCTTTCTGCAGGTAAGATGTCAATATTTACCCTCCTGATTGTGGCTAGTGACCACACAGTATTACTCATGCATGGTTTCTAGGCATGGCCTTTCAGACTGGCAGGTAACTTCAAGGGACCCATGACTATGGCTTTTGCTTCGAACAAACATTTTTCTTCATTCATTACATACATCCCACAGCCCTTGAACAGTGTGATTGGGGGTGGGTCACTTCATGATTTCATTCTGTCTTTCTAGAAACCACTATAACAACAGATTTGGATTTAGAGTAATCACTTTTAATGTTATTTTTGGAAAAGTTTGTCTTTGTAGCCTTCAAAAACAAGATTTGGTGCTTTACATTAGACTGTTTTGGGATGCTCCTCACAGAGGGTTTTTCTTCAGGACTTCCGTTCTGCACTGTTATTATCAGTTCTGCCAGCTCTGGGCTATAATCTATTGGTATCTCTGGCAGCTTTTCTTCAATAATTTCATAAACTAAAGAATTGGTATTTTTACATTGAAAGTATGCTTTGGGTGACCATTTCACAAACACAGCATCCCAGAGTCCAAACATCAGACTTATAGCTCTAGTGTTTGTTTGAGAATAATTGAGGACTCATGTAGTAAGGTGTGCCAGTGAGGGTACTAACCATGTCACAGTTGCTATAGTGATCCAGGCTGGGGCACTGCCCTCAGACACTTGATTT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16928689 971 + 48394510 TTTTTTATCCTATGATTCCATTTATCTTGAGCTTATCATTCATTTTGTCCTCGGCTTTTGGTCTTTGTTTAGGAGCTGCAGAGGCTTCACTGGTTCATTTCTTTCCTTGGTGACATTGTCCAAAGACCAGGCGGTAGTCAAGTTTTTAGGTAGAGTGCTGGATTCAGTATTATTCTGCAGCCCATAAGAAGAAATACTGTTTTTATCTCCTAGGTCACTAAAGGCATCTAAGTGTCTTGGTTGATTCTTCTGAACTAAGCCACTTAGTTCATTGAGTCTCTCTTTTCTGCAGGTAAGATGTCAATATTTACCATCCTGATTGTGGCTGGTGACCACACAGTATTACTCATGCATGGTTTCCAGGCATGGCCTTTCCGACTGGCAGGTAACTTCAAGGGAGCCATGACTATGGCTTTTTCCTCAAACAAACATTTTTCTTCATTCATTACATATGTCCCACAGCGCTTGAACAGTGTGGTTGGGGGTGGGTCACTTCATGATTTCATTCTGTCTTTCTAGAAGCTACTATAACAACAGATTTGGATTTAGAGTAATCACTTTTAATGTTATTTTTGGAAAAGTTTGCCTTTGTAGCCTTCAAAAACAAGATTTGGTGCTTTACATTAGGCTGTTTTGGGATGCTCCTCACAGAGGGTCTTTCTTCAGGACTTCCATTCTGCACTGTTATTATCAGTTCTGCCAGCTCTGGGCTATAATCTATTGGTATCTCTGGCAGCTTTTCTTCAATAATCTCATAAACTGAAGAATTGGTATTTTTACATTGAAAGTATGCTTTGGGTGACCATTTCACAAACACAGCATCCCAGAGTCCAAATATCAGACTTATAGCTGTAGTGTTTGTTTGAGAATAATTGAGGACTCATGTAGTAGGGTGTGCCACTGAGGGTACTAACCATGTCACAGTTGCCATAGTGATCCAGGCTGGGCCACTGCCCTCAGACACTTGATTT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4439119 961 + 32716333 TTTTTTATCCTATGATTCCATTTATCTTGAGCTTATCATTCATTTGGT------CTTTTGGTCTTTGTTTAGGGGCTACAGGGGCTTCGTTGGTTCATTTCTTTCCTTGGTGACATTGTCCAAAGATCAGGTGGTAGTCAGGTTTTTAGGGAGAGTGCTGGACTCAGTATTATTCTGCAGCCCATAAGAAGAAATATTGTTTTTATCTCCCAGGTCACTAAAGGCATCTAAGTGTCTTGGTTGATTCTTCTGAACTAAGCCACTTAGTTCATTGAGTCTCTCCTTTCTGCAGGTAAGATGTCAATATTTACCCTCCTGATTGTGGCTAGTGACCACACAGTATTACTCATGCATGGTTTCCAGGCATGGCCTTTCAGACTGGCAGGTAACTTCAAGGGACCTATGACTATGGCTTTTTCCTCAAACAAACATTTTTCTTCATTCATTACATACATCCCACTGCCCTTGAACAGTGTGGTTGGGGGTGGGTCACTTCATGATTTCATTCTGTCTTTCTAGAAACCACTATAACAATAGATTTGGATTTAGAGTAATCACTTTTAATGTTATTTTTGGAAAAGTTTGTCTTTGTAGCCTTCAAAAACAAGATTTGGTGCTTTACATTAGGCTGTTTTGGGATGCTCCTCACAGAGGGTCTTTCTTCAGAACTTCTGTTCTGCACTGTTATTATCAGTTCTGCCAGCTCTGGGCTATAATCTATTGGTATCTCTGGCAGCTTTTCTTCGGTAATCTCATAAACTAAAGAATTGGTATTTTTACATTGAAAGTATGCTTTGGGTGACCGTTTCACAAACACAGCATCCCAGAGTCCAAACATCAGACTTATAGCTGTAG----TGTTTGAGAGTAATTGAGGACTCATGTAGTAGGGTGTGCCAGTGAGGGTACTAACCATGTCACAGTTGCCATAGTGATCCAGGCTGGGGCACTGCCCTCAGACACTTGATTT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168552411 954 - 198365852 TTTTTTATCCTATGATTCCATTTCTCTTGTGCTTATCATGCATTTGTTCCTTGGCTTTTGATCTTTGTTTAGGGGCTGCAGCGGCTTCACTGGTTCATTTCTTTCCTTGGTGACATTGTCCAAAGACCATGTGGTAGTCAGGTTTTTAGGTAGAGCTCTGGAC----TATTCTTCTGCAGCCCATAAGAAGAAATATTGTTTTCATTTCCTAGCTCGCTAAAGGCATCTAAGTGTCTTGGTTGATTCTTCTGAACTAAGCCATTTAGTTCATTGAGTCTCTCCTTTCTGCAGGTAAGATGTCAATATTTATCCTGCTAATTGTGGCT-----------AGTATTACTCATGCATGGTTTCCAGGCATGGCCTTTCAGACTGGTAGGTAACTTCGAGAGATAAATGACCATGGCTTTTTCCTGGGACAAACATTTTTCTTCATTCATTACATATGTCCCAGAGCCCTTGAAGAGTGTGGCTGGCAGTGGGTCACTTCATGATTTCATTCTGTCTTTCTAGAAACTACTATAACA--AGATATGGATTTAGAGTAATCACTTTTAATGTTATTTTTGGAAATGTTTGTCTTTGTAGCCTTCAAAAACAAGATTTGGTGCTTTACATTAGACTGTTTTGGGATGCTCCTCACAGAGGGTCTTTCTTCAGGACTTTTGTTCTGCACTGTTTTTATCAGTTCTGCCAGCTCTGGCCTATAATCTATTGGTATCTCTGGCAGCTTTTCTTCAATAATCTCATACACTAAAGAATTGGTACTTTTACATTGAAAGTATGCTTTGGGTGACCATTTCACAAACACAGCATCCCAGAGCCCAAACATCAGACTTATAGCTGTAGTGTTTGTTTGAGAATAACTGAGGACTCACGTAGTAGGGTGTGCCAGTGAGGGTACTAACCATGTCACAGTTGGCAGAGTGACCCAGGCTGGGGCGCTGTCCTCAGACACTTGATTT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162216881 954 - 192294377 TTTTTTATCCTATGATTCCATTTCTCTTGTGCTTATCATGCATTTGTTCCTTGGCTTTTAATCTTTGTTTAGGGGCTGCAGCGGCTTCACTGGTTCATTTCTTTCCTTGGTGACATTGTCCAAAGACCATGTGGTAGTCAGGTTTTTAGGTAGAGCTCTGGAC----TATTCTTCTGCAGCCCATAAGAAGAAATATTGTTTTCATTTCCTAGCTCGCTAAAGGCATCTAAGTGTCTTGGTTGATTCTTCTGAACTAAGCCATTTAGTTCATTGAGTCTCTCCTTTCTGCAGGTAAGATGTCAATATTTATCCTGCTAATTGTGGCT-----------AGTATTACTCATGCATGGTTTCCAGGCATGGCCTTTCAGACTGGTAGGTAACTTCAAGAGATAAATGACCATGGCTTTTTCCTGGGACAAACATTTTTCTTCATTCATTACATATGTCCCAGAGCCCTTGAAGAGTGTGGCTGGCAGTGGGTCACTTCATGATTTCATTCTGTCTTTCTAGAAACTACTATAACA--AGATATGGATTTAGAGTAATCACTTTTAATGTTATTTTTGGAAATGTTTGTCTTTGTAGCCTTCAAAAACAAGATTTGGTGCTTTACATTAGACTGTTTTGGGATGCTCCTCACAGAGGGTCTTTCTTCAGGACTTTTGTTCTGCACTGTTTTTATCAGTTCTGCCAGCTCTGGCCTATAATCTATTGGTATCTCTGGCAGCTTTTCTTCAATAATCTCATACACTAAAGAATTGGTATTTTTACATTGAAAGTATGCTTTGGGTGACCATTTCACAAACACAGCATCCCAGAGCCCAAACATCAGACTTATAGCTGTAGTGTTTGTTTGAGAATAACTGAGGACTCACGTAGTAGGGTGTGCCAGTGAGGGTACTAACCATGTCACAGTTGGCATAGTGACCCAGGCTGGGGCGCTGTCCTCAGACACTTGATTT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150900476 958 - 180432695 ttttttatcctATGATTCCATTTCTCTTGTGCTTATCATGCATTTGGTCCTTGGCTTTTAATCTTTGTTTAGGGGCTGCAGAGGCTTCACTGGTTCATTTCTTTCCTTGGTGACATTGTCCAAAGACCATGTGGTAGTCAGGTTTTTAGGTAGAGTGCTGGACTCAGTCTTATTCTGCAGCCCATAAGaagaaatattgttttcatttcctaGCTCGCTAAAGGCATCTAAGTGTCTTGGTTGATTCCTCTGAACTAAGCCACTTAGTTCATTGAGTCTCTCCTTTCTGCAGGTAAGATGTCAAGATTTATCCTGCTAATTGTGGCT-----------AGTATTACTCATGCATGGTTTCCAGGCATGGCCTTTCACACTGGTAGGTAACTTCAAGACACAAATGACCATGGCTTTTTCCTGGgacaaacatttttcttcattcattacATATGTCCCAGAGCCTTTGAAGAGTGTGGCTGGCAGTGGGTCACTTCATGATTTCATTCTGTCTTTCTAGAAACTACTATAACA--AGATATGGATTTAGAGTAATcacttttaatgttatttttggaaatgtttgTCTTTGTAGCTTTCAAAAACAAGATTTGGTGCTTTACATTAGACTGTTTTGGGATGCTCCTCACAGAGGGTCTTTCTTCAGGACTTTTGTTTTGCACTGTTTTCATCAGTTCTGCCAGCTCTGGCCTATAATCTATTGGTATCTCTGGCAGCTTTTCTTCAATAATCTCATACACTAAAGAATTGGTATTTTTACATTGAAAGTATGCTTTGGGTGACCATTTCACAAACACAGCATCCCAGAGCCCAAACATCAGACTTATAGCTGTAGTGTTTGTTTGAGAATAACTGAGGACTCACGTAGTAGGGTGTGCCAGTGAGGGTACTAACCATGTCACAGTTGGCATAGTGACCCAGGCTGGGGCGCTGTCCTCAGACACTTGATTT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15001480 946 - 90373283 TTTTTTATCCTATGATTCCATTTCTCTTGAGCTTATCATGCATTTGGTCCTTGGCTTTTAATCTTTGTTTAGGGGCTGCAGAGGCTTCACTGGTTCATTTCTTTCCTTGATGACATTGTCCATAGACCATGTGGTAGTCAGGTTTTTAGGTAGAGCACTGGACTCAGTATTATTCTGCAGCCCATAAGAAGAAATATTGTTTTCATTTCCTAGCTCACTAAAGGCA--------TCTTGGTTGATTCTTCTGAACTAAGCCACTTAGCTCATTGAGTCTCTCCTTTCTGCAGGTAAGATGTCAATATTTATCCTGCTAATTGTGGCT-----------AGTATTACTCATGCATAGTTTCCAGGCATGGCCTTTCAGACTGGTAGGTAACTTCAAGAGACAAATGGCCATGGCTTTTTCCTGGGACAAACATTTTTCTTCATTCATTATATATGTCCCAGAGCCCTTGAAGAGTGTGGCTGGCAGTGGGTCACTTCATGATTTCATTCTGTCTTTCTAGAAACTTCTATAACA--AGATATGGATTTAGAGTAATCACTTTTAATGTTATTTTTGGAAATGTTTGTCTTTGTAGCCTTCAAAAACAAGATTTGGTGCTTTACATTAGACTGTTTTGGGATGCTCCTCACAGAGGG----TCTTCAGGACTTTTGTTCTGCACTGTTTTTATCAGTTCTGCCAGCTCTGGCCTATAATCTATTGGTATCTCTGGCAGCTTTTCTTCAATAATCTCATAAACTAAAGAATTGGTATTTTTACATTGAAAGTATGCTTTGGGTGACCATTTCACAAACACAGCATCCCAGAGCCCAAACATCAGACTTATAGCTGTGGTGTTTGTTTGAGAATAACTGAGGACTCATGTAGTAGGGTGTGCCAGTGAGGGTACTAACCATGTCAGAGTTGGCATAGTGACCCAGGCTGAGGCGCCATCCTCAGATACTTGATTT i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819108 0 + 39895921 C e mm10.chr16 78115987 538 + 98207768 I a score=1140668.000000 s hg38.chr21_KI270874v1_alt 64503 437 + 166743 TAAGTAGTCCATAGAATATCAAAGAAAGAGTTGGTCACCAAATACAGATTTTt-aaaataaatgtaaaccattagcatatatagataaaatataaaaatgaatgcaaataATTTGGTTTTTCT-AGAAAGCATCTAGTATTATGTTATTCAAAATAATATTGTTCACAGTATTTATTGTCTTGATCGAAATGTT---AGTTTTCTTTTGACTTAATTTTAGTTTCTGTTTAATTCCTAGGAAGGCTATTGGTTT--AAAGAAAAAGTCTTACCACTCAAAAATATGAGTTGAT-AAAGACAGTAAAAACCATGTGTTATCATCTTTGTGCAGTTTACAA-----GACACTGTGCCCATAATAATACATTCTCAATAAAGAATAAAGGAAGGAAAAATATAAGAAAGGGAAGAAGAAATGGTGAAAA-----AGAATCATAAAAACAAAGATAAAC s panTro4.chr21 3677368 437 + 32799110 TAAGTAGTCCATAGAATATCAAAGAAAGAGTTGGTCACCACATACAGATTTTT-AAAATAAATGTAAGCCATTTGCATGTATAGATAAAATATAAAAATGAATGCAAATAATTTTGTTTTTCT-AGAAAGCATCTAGTATTATGTTATTCAAAATAATATTGTTCACAGTATTTATTGTCTTGATCAAAATGTT---ACTTTTCTTTTGACTTAATTTTAGTTTCTGTTTAATTCCTAGGAAAGCTATTGGTTT--AAAGAAAAAGTCTTACCACTCAAAAATATGAGTTGAT-AAAGACAGTAAAAACCCTGTGTTATCATCTTTGTGCAGTTTACAA-----GACACTGTGCCCATAATAATACATTCTCaataaagaataaaggaaggaaaaatataagaaagggaagaaaaaatggtgaaaa-----agaatcataaaaacaaagataaac i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16929660 440 + 48394510 TAAGTAGTCCACAGAATATCAAAGAAAGAGTTGGTCACCAAATACAGATTTTT-AAAATAAATGTAAACCATTTGCGTGTATAGATAAAATATAAAAATGAATGCAAATAATTTTGTTTTTCT-AGAAAGCATCTAGTATTATGTTATTCAAAATAATATTGTTCACAGTATTTATTGTCTTGATTGAAATGTTAGAAGTTCTCTTTTGACTTAATTTTTGTTTCTGTTTAATTCCTAGGAAAGCTATTGGTTT--AAAGAAAAAGTCTTACCACTCAAAAATATGAGTTGAT-AAAGACAGTAAGAACCCTGTGTTATCATCTTTGTGCAGTTTACAA-----GACACTGTGCCCATAATAATACATTCTCAATGaagaataaaggaaggagaaatataaggaagggaagaagaaatggtgaaaa-----agaatcataaaaacaaagataaac i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4440080 440 + 32716333 TAAGTAGTCCACAGAATATCAAAGAAAGAATTGGCCACCAAATACAGATTTTT-AAAATAAATGTAAACCATTTGCATGTATAGATAAAATATAAAAATGAATGCAAATAATTTTGTTTTTCT-AGAAAGCATCTAGTATTATGTTATTCAAAATAATATTGTTCACAGTATTTATTGTCTTAATTGAAATGTTAGAAGTTTTCTTTTGACTTAATTTTAGTTTCTGTTTAATTCCTAGGAAAGCTATTGGTTT--AAAGAAAAAGTCTTACCACTCAAAAATGTGAGTTGAT-AAAGACAGTAAAAACCCTGTGTTATCATCTTTGTGCAGTTTACAA-----GACACTGTGCCCATAATAATACATTCTCAATAAAGAATAAAGGAAGGAAAAATATAAGAAAGGGAAGAAGAAATGATGAAAA-----AGAATCATAAAAACAAAGATAAAC i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168553365 446 - 198365852 TAAGTAGTCCACAGAATATCAAAGAAAGCTTTGGTCACCAAGTACAGATTTTTAAAAATAAATGTAAACTATTTGCATGTATAGACAAAATATAAAAATGAATCCACATAATTTTGTTTTTCT-AGAAAGCATCTGGTATTGTATTATTCAAAATAATATTGTTCACAGTATTGATTGTCTTGATAGAAATGTTAGAAGTTTTCTTTTGATTTAATTTTAGTTTCTGTTTAATTCCTAGGAAAGCTATTGGTTT--AAAAAAAAAGTCTTACCACTCAAGAATATGAGTTGAT-AAAGACAGTAAAAACCCTGTGTTATCATCTTTGTGCAGTTTACCA-----GACACTGTGCCCATAATAATACATTCTCaataaagaataaaggaaggaaaaatacaagaaagtgaagaagaaatgatgaaaaaagagagaatcgtaaaagcaaagataaac i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162217835 445 - 192294377 TAAGTAGTCCACAGAATATCAAAGAAAGCTTTGGTCACCAAGTACAGATTTTT-AAAATAAATGTAAACTATTTGCATGTATAGACAAAATATAAAAATGAATCCACATAATTTTGTTTTTCT-AGAAAGCATCTGGTATTGTATTATTCAAAATAATATTGTTCACAGTATTGATTGTCTTGATAGAAATGTTAGAAGTTTTCTTTTGATTTAATTTTAGTTTCTGTTTAATTCCTAGGAAAGCTATTGGTTT--AAAAAAAAAGTCTTACCACTCAAGAATATGAGTTGAT-AAAGACAGTAAAAACGCTGCGTTATCATCTTTGTGCAGTTTACCA-----GACACTGTGCCCATAATAATACATTCTCAATAAAGAATAAAGGAAGGAAAAATACAAGAAAGTGAAGAAGAAATGATGAAAAAAGAGAGAATCGTAAAAGCAAAGATAAAC i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150901434 446 - 180432695 TAAGTAGTCCACAGAATATCAAAGAAAGTTTTGGTCGCCaagtacagattttt-aaaataaatgtaaactattTGCATGtatagacaaaatataaaaatgaatccacataattttgtttttct-agaaagCATCTGGTATtgtattattcaaaataatattgtTCACAGTATTGATTGTCTTGATAGAAATGTTagaagttttcttttgatttaattttagcTTCTGTTTAATTCCTAGGAAAGctattggttt-aaaaaaaaaagtcttaccaCTCAAGAATATGAGTTGAT-AAAGACAGTAAAAACCCTGTGTTATCATCTTTGTGCAGTTTACCA-----GACACTGTGCCCATAATAATACATTCTcaataaagaataaaggaaggaaaaatacaagaaagtgaagaagaaatgatgaaaaaagagagaatcgtaaaagcaaagataaac i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15002426 443 - 90373283 TAAGTAGTCCACAGAATATCAAAGAAAGCGTTGGTCACCAAGTACAGATTTTT-AAAATAAATGTAAACCATTTGCATGTATAGACAAAATATAAGAATGAATCCACATAATTTTGTTTTTCT-AGAAGGCATCTAGTATTATATTATTCAAAATAATATTGTTCACAGTATTTATTGTCTTGATAGAAATGTTAGAAGTGTTCTTCTGATTTAATTTTAGTTTCTGTTTAATTCCTAGGAAAGCTATTGGTTTAAAAAAAAAAAGTCTTACCACTCAAGCATATGAGTTGAT-----ACAGTAAAAACCCTGTGTTATCATCTTTGTGTGGTTTACCA-----GACACTCTGCCCATAAAAATACATTCTCAATAAAGAATAAAGGAAGGAAAAATACAAGAAAATTAAGAACAAATGATGATAAAAGAAAGAACCATAAAAGCAAAGATAAAC i chlSab2.chr2 C 0 C 0 s canFam3.chr31 13819108 404 + 39895921 TAAGCAGTCCACAGAATTTCAAATAGTGTAAT--------AATTCAG-TTTTT-AAAATGGACTTAAACCATTTTCATGTATAGATATA--TTAAAAACAAACACAAATGATTTTGCTTTTCTAAAAAAGTATCTAGTA-----TTATTGAAAATAATACCATT-----TATTTGTTGTCCAGGTAGAAAGGTTAGAAATTTTCTCTTGACTTAATTCTATTT----TTTAATTTCAAAGAAAGCTATTGGT--------AAAAAGTGTTAccattcaagaatatgagttggttgagggcagt---aatccttttttgtcatctttgtgtaccTTACAATATATAACAGTGTCCTACGTATGATACACACTTAA--------GAAGAAAAAGAAAATACGAAAAAATGTAAAAGAGATTATGAAAA-----TGGAGCATAAAA-TAAAGGTAAGC i canFam3.chr31 C 0 I 175 e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78115987 538 + 98207768 I a score=466259.000000 s hg38.chr21_KI270874v1_alt 64940 185 + 166743 TCATG------------AATCAATAAaagaga-------gaagaaaagggaaaagtaa----------aagaagaaaaacataaagag---------ggaggggaagatcatgaaagacaagaaaaaagacgaaagaTAA---TTTTTTTCTATAACACAACAGTAACATGGCAAGGAATTCTCAACTCTCAAGATTTACTGAAATTTTGACAGAACTCAGAGAGA s panTro4.chr21 3677805 185 + 32799110 tcatg------------aatcaataaaagaga-------gaagaaaagggaaaagtaa----------aagaacaaaaacataaagag---------ggaggggaagatcatgaaagacaagaaaaaagacgaaagaTAA---TTTTTTTCTATAACACAACAGTAACATGGCAAGGAATTCTCAACTCTCAAGATTTATTGAAATTTTGACAGAACTCATAGAGA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16930100 184 + 48394510 ccatg------------aatcaataaaagaga-------gaagaaaagggaaaagtaa----------aagaagaaaaacataaagaa---------ggaggggaagatcatgaaagacaagaaaaaagacaaaaGATAA----TTTTTTCTATAACACAACAGTAACATGGCAAGGAATTCTCAACTCTCAAGACTTACTGAAATTTTGACAGAACTCATAGAGA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4440520 184 + 32716333 TCATG------------AATCAATAAAAGAGA-------GAAGAAAAGGGAAAGGTAA----------AAGAAGAAAAACATAAAGAA---------GGAGGGGAAGATCATGAAAGACAAGAAAAAAGACAAAACATAA----TTTTTTCTATAACACAACAGTAACATGGCAAGGAATTCTCAACTCTCAAGATTTACTGAAATTTTGACAGAACTCATAGAGA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168553811 183 - 198365852 tcatg------------aatcaataaaagaga-------gaagaaaagggaaaggtac----------aagaagaaaaacataaagaa---------ggaggggaagttcatgaaggacaagaaaaaagacaaaaGATAA-----TTTTTTTATAGCACAACACTAACATGGCAAGGAATTCTCAATTCTCGAGATTTACTCAAATTTTGACAGAACTCATAGAGA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162218280 183 - 192294377 TCATG------------AATCAATAAAAGAGA-------GAAGAAAAGGGAAAGGTAC----------AAGAAGAAAAACATAAAGAA---------GGAGGGGAAGTTCATGAAGGACAAGAAAAAAGACAAAAGATAA-----TTTTTTTATAACACAACACTAACATGGCAAGGAATTCTCAATTCTCAAGATTTACTCAAATTTTGACAGAACTCATAGAGA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150901880 182 - 180432695 tcatg------------aatcaataaaagaga-------gaagaaaagggaaaggtac----------aagaagaaaaacataaagaa---------ggaggggaagttcatgaaggacaagaaaaatgacaaaagataa-----tttttttataacaCAACACTAACATGGCAAGGAATTCTCAATTCTCAAGATTTA-TCAAATTTTGACAGAACTCATAGAGA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15002869 183 - 90373283 TCATG------------AATCAATAAAAGAGA-------GAAGAAAAGGGAAAGGTAC----------AAGAAGAAAAACATAAAGAA---------GGAGGGGAAGTTCATGAAGGACCAGACAAAAGACAAAAGATAA-----TTTTTTTGTAACACAACACTAACATGGCAAGGAATTCTCAATTCTCAAGATTTACTCAAATTTTGACAGAACTCATAGAGA i chlSab2.chr2 C 0 C 0 s canFam3.chr31 13819687 215 + 39895921 tcatgcactgtctctcaaataagtaaataaaatctttttaaaaaaTAAATAAGGGTAAGCTTATAACGAAGAATAAGGAGACAAAAAAGAGATCTGTGAAGGAGAAGGGAAAGGTGGGGAAGAAAAGAGACAAAATAAAAGAATTCTTTTGTATCACACAACAGTAACATGG-----------CAATTCTCAAGGCTTAGTAAAGTTTTGGCAGAAGCTATAGAGA i canFam3.chr31 I 175 I 453 e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78115987 538 + 98207768 I a score=559890.000000 s hg38.chr21_KI270874v1_alt 65125 250 + 166743 CTGTAGAATGTGTGCTTGAAACGTGAATGAAGAAAAGAGAAACAAATCAGATAATGGGCATAAGGTAGACTCTTATCCGAATGTACAAAAGTGAGTGGGTATATTTTTTTAAAAATAAAGACAGTTTtatggtatgaatgtgtctcccaaaattcatatgatagaacttaatcaccaatgtgattttaccaagatgtggagactttagggagttattaagtcatgaaagcagagtcatcatggatgagat s panTro4.chr21 3677990 250 + 32799110 CTGTAGAATGTGTGCTTGAAACGTGAATGAAGAAAAGAGAAACAAATCAGATAATGGGCATAAGGTAGACTCTTATCAGAATGTACAAAAGTGAGTGGGTATATATTTTAAAAAATAAAGACAGTTTtatagtatgaatgtgtctcccaaaattcatatgatagaacttaatcaccaatgtgattttatcaagatgtggagactttagggagttattaagtcatgaaagcagagtcatcatggatgagat i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16930284 248 + 48394510 CTGTAGAATGTGTGCTTGAAATGTGAATGAAGAAAAGAGAAACAAATCAGATAATGGGCATAAGGTAGACTC--ATCAGAATGTACAAAAGTGAGTGGatatattttttttaaaataaaGACAGtgttatggtatgaatgcgtctgccaaaattcatatgatagaacttaatcaccaatatgattttatcaagatgtggagactttagggagttattaagtcatgaaagcagagtcatcatggatgagat i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4440704 248 + 32716333 CTGTAGAATGTGTGCTTGAAACGTGAATGAAGAAAAGAGAAACAAATCAGATAATGGGCATAAAGTAGACTCTTATCAGAATGTACAAAAGTGAGCGGATATATCTTTTTAAAAATAAAG--AGtgttatggtatgaatgtgtcccccaaaattcatgtgatagaacttcatcaccaatgtgattttatcaagatgtggagactttagggagttattaagtcatgaaagcagagtcatcatggatgagat i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168553994 244 - 198365852 CTGTAGAATGTGTGCTTGAAACATGAATGAAGAAAAGAGAAACAAATCAGA----GGGTGTAAAGTAGACTCTTAACAGAATGTACAAAAGTGAGTGGAAATATTTTTTTT-AAATAGAGACAGtgttatggtatgaatgtgtccccaaaaattcatatgatagaacttaatcaccaatgtgattttatcaagatgt-gagactttagggagttattaagtcataaaagcagagtcatcagggatgagat i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162218463 244 - 192294377 CTGTAGAATGTGTGCTTGAAACATGAATGAAGAAAAGAGAAACAAATCAGA----GGGTGTAAAGTAGACTCTTAACAGAATGTACAAAAGTGAGTGGAAATATTTTTTTT-AAATAGAGACAGtgttatggtatgaatgtgtccccaaaaattcatatgatagaacttaatcaccaatgtgattttatcaagatgt-gagactttagggagttattaagtcataaaagcagagtcatcagggatgagat i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150902062 245 - 180432695 CTGTAGAATGTGTGCTTGAAAcatgaatgaagaaaagagaaacaaatcagA----GGGTGTAAAGTAGACTCTTAACAGAATGTACAAAAGTgagtggaaatattttttttaaaatagagacagtgtTATGGTATGAATGTgtccccaaaaattcatatgatagaacttaatcaccaatgtgattTTATCAAGATGT-GAGACTTTAGGGAGTTATTAAGTCATAAAAGCAGAGTCATCGGGGATGAGAT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15003052 244 - 90373283 CTGTAGAATGTGTGCTTGAAACATGAATGAAGAAAAGAGAAACAAATCAGA----GGGCATAAAGTAGATTCTTAACAGAATGTATAAAAGTGAGTGGAAATATTTTTTTT-ACATAGAGACAGTATtatggtatgaatgtgtccccaaaaattcatatgatagaacttaatcaccaatgtgattttatcaagatgt-gagactttaaggagttattaagtcataaaagcagagtcatcggggatgagat i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78115987 538 + 98207768 I a score=152942.000000 s hg38.chr21_KI270874v1_alt 65375 281 + 166743 tagagccattaaaaaagggcttgaaggagtaggttctttctcttcccctcttctgcgatgtgaggacactgctttcaaggcagttccaagtttcatcttggaagcagaggctggagccctcaccagacactaacctgcagccactttgatcttggacttcactgtttccagaaccatgaggaaataaatttctttataaattacacagtctcaggtatttgttataacagtacagataaactaagaAAGACAATGATTTTGCATCTATATCTTGAAGAAAA s panTro4.chr21 3678240 281 + 32799110 tagagccattaaaaaagggcttgaaggagtaggttctttctcttcccctcttctgcgatgtgaggacactgctttcaaggcagttccaagtttcatcttggaagcagaggctggagccctcaccagacactaacctgcagccactttgatcttggacttcactgtttccagaaccatgaggaaataaatttatttataaattacacagtctcaggtatttgttataacagtacagataagctaagaAAGACAATGATTTTGCATCTATATCTTGAAGAAAA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16930532 281 + 48394510 tagagccattaaaaaagggcttgaaggagtaggttctttctcttcccctcttctgcgatgtgaggacactgctttcaaggtagttccaagtttcatcttggaagtagaggctggagccctcaccagacactaacctgcagccactttgatcttggacttcactgtttccagaaccatgaggaaataaatttctttataaattacacagtctcaggtatttgttataatagtacaaataaactaagaAAGACCATGATTTTGCATCTATATCTTGAAGAAAA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4440952 281 + 32716333 tcgagccattaaaaaagagcttgaaggagtaggttctttctcttcccctcttctccgatgtgaggacgctgctttcaaggcatttccaagtttcatcttggaagcagaggctggagccctcaccagacactaacctgcagccactttgatcttggacttcactgtttccagaaccatgaggaaataaatttctttataaattacacagtctcaggtattcgttataatagtacaaataaactaagaAAGACAATGATTTTGCATCTATATCTTGAAGAAAA i nomLeu3.chr25 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78115987 538 + 98207768 I e rheMac3.chr3 168554238 0 - 198365852 C e chlSab2.chr2 15003296 0 - 90373283 C e macFas5.chr3 162218707 0 - 192294377 C e papAnu2.chr3 150902307 0 - 180432695 C a score=20888.000000 s hg38.chr21_KI270874v1_alt 65656 8 + 166743 TAAGGAAT s panTro4.chr21 3678521 8 + 32799110 TAAGGAAT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16930813 8 + 48394510 TAAGGAAT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4441233 8 + 32716333 TAAGGAAT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168554238 8 - 198365852 taAGGAAT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162218707 8 - 192294377 taAGGAAT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150902307 8 - 180432695 TAAGGAAT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15003296 8 - 90373283 taAGGAAT i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78115987 538 + 98207768 I a score=422541.000000 s hg38.chr21_KI270874v1_alt 65664 164 + 166743 AGTATGTAAACAACTGTTTAAAGTGTTTAAAACAGTCTATTCCATTGAAACACTGTTACACATTAGAATATATTTTTATATTAA--------TTTTTTCTCTTTTCTAAGAACAGGATCCTCACTTTGCATGGCCTAAAACCTCAATTTGCAGGAAGCAGTGTGGAGAGTGG s panTro4.chr21 3678529 164 + 32799110 AGTATGTAAACAACTGTTTAAAGTGTTTAAAACAGTCTATTCCATTGAAACACTGTTACACATTAGaatatatttttatattaa--------ttttttCTCTTTTCTAAGAACAGGATCCTCACTTTGCATAGCCTAAAACCTCAATTTGCAGCAAGCAGTGTGGAGAGTGG i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16930821 164 + 48394510 AGTATGTAAACAACTGTTTAAAGTGTTTAAAACAGTCTATTCCATTGAAACACTGTTACACATTAGaatatatttttatattaa--------ttttttCTCTTTTCTAAGAACACGATCCTCACTTTGCATGGCCTAAAACCTCAATTTGCAGCAAGCAGTGTGGAGAGTGG i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4441241 163 + 32716333 AGTAGGTAAACAACTGTTTAAAGTGTTTAAAACAGTCTACTCCATTGAAACACTGTTACACATTAGAATATA-TTTTATATCAA--------TTTTTTCTCTCTTCTAAGAACACGATCCTCACTTTGCATGGCCTAAAACCTCAATTTGCAGCAAGCAGTGTGGAGAGTGG i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168554246 165 - 198365852 AGTATGTAAACAACTATTTAAAATGTTTTAAAAAGTCTATTCCATTGAAACACTGTTACACATTAGAATATATTTTCGTATTAA-------TTTTTTTCTCTTTTCTAAGAACACAATCCTCACTTTACATGACCTAAAACCTTGATTTGCAGTAAGCAGTGTAGAGAGTGG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162218715 165 - 192294377 AGTATGTAAACAACTATTTAAAATGTTTTAAAAAGTCTATTCCATTGAAACACTGTTACACATTAGAATATATTTTCGTATTAA-------TTTTTTTCTCTTTTCTAAGAACACAATCCTCACTTTACATGACCTAAAACCTTGATTTGCAGTAAGCAGTGTAGAGAGTGG i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150902315 165 - 180432695 AGTATGTAAAcaactatttaaaatgttttaaaaagtctattcCATTGAAACACTGTTACacattagaatatatttttgtattaa-------tttttttctcttttctaagaaCACAATCCTCACTTTACATGACCTAAAACCTTGATTTGCAGCAAGCAGTGTAGAGAGTGG i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15003304 165 - 90373283 AGTATGTAAACAATTGTTTAAAGTGTTTAAAAAAGTCTATTCCATTGAAACACTGTTACACATTAGAATATATTTTTGTATTAA-------TTTTTTTCTCTTTTCTAAGAACACGATCCTCACTTTACATGGCCTAAAACCTCAATTTGCAGCAAGCAGTGTAGAGAGTGG i chlSab2.chr2 C 0 C 0 s mm10.chr16 78116525 169 + 98207768 aatatttaaatatacaatTAAAGTATGTAAAACACTGTATCACCCTGATGTCTTACTATATGTAAGAATATA-TTTTATACTACGTTACATTTCTATTTTCTTTCCTACAAAAATGAACTTGACATTACATTGTCTAGAACTTTAATTTGCAGCAG--AATGGGGAAAGTGG i mm10.chr16 I 538 I 9034 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I a score=3293459.000000 s hg38.chr21_KI270874v1_alt 65828 1472 + 166743 TAGAGcagcagtccccaacctttttggcacagagaccggtttcatggaagtcaatttttccatgaatggagggggtagacactcacatcatcagacattagttagattctcataaggagcaggcaacctagatccctcacatacacagttcacaatagggttcatgctcctataagaatctaatgccaccactgatctgacaggaggcagagttcaggcagcagtgctcactggcctgccactcacctcttgctgtgcagcccagttcctaacaggccCAGGGTTTGGGAACCTCTGTGGTAGTGTCTGAGAAAGTAGATTTATGATGCTGTAGAAGAAATGCCAATATAAAAGCTGAGATGATACTTAACTCCTAACAAGTAACCAGAATTTTGCAGCCAAACCATTGCCTTATAAGTCCTTGGTTTCTACATGGCCAAAAACAGAATCCAAAACTTAGGTAGAGTTTAGCTGGAGGGACTCACACAGAGTGACCATATAGCTACAGAAGAGCTCTGCAGTGAGAGCTGTTGAGTGCAGAGTCACAGTCATTACTCAGAGCCCATCCTTTTATCTCTTCATTCATTTAGtgactgtgcatgctctttgccacttgc-ttttacccaggcaacattgtatagtcttgaaaattcaccaactgtcatctcatatgtaagctc--------------------------------------------------------------------ttttctgattcatcacactgatttagaagactcttgtctgtacttccacggcaccatgtgaaaaatatctattatattccatattataccatgttttaactcttcttttaaagctgtgcatcttcctcaatgactgtaaattttttaagagaacacaccatttataattTCATGGC---------atatacatatatatatgtatatatatatgtatatatatctatgtatatatatatatatgtatatatatCTCCATGTATATCTCATTAAATGTTGAGTGAATAAAATCAGGCTATAATTCTGGCAAAGTATATTAATGTTTTTAAGAC---------------TTCAACAATA----TGGCTTTTTAAACTTAAGCTGGTTTGACTGAG-TTTTTTATATCCTTCAGAAGCTTAAAGTCTCACCATCTAGAGTTAAAAGGAAATGCTTTGTGATGGAATCTCCATTTTTTTCATGTAAATTCAACCAAATAATTTTAATTTTACACATAAGAGATA-------------------------------------TTTTGGTCTTCTAAAATGTATC-TTTATTATTATGGAAGTGA---TTTTTTTCCTTTACTGATTTTCTGGTTGGGAAATATGGGCATTTTCTTTTGTTTTGAACTTACTTCCTTTTCTTTACGTGGTGGATTCAGCCTAAACATAAAATAAAAGTTAAGAGAGATAGAATCAATCATCAGGGAATAAAACAGAGAAAGAAATCAACAAACATGTCCTTCC-TTTTTTTTCTATGAATGATATAGTGAACAGAAATCAGGACAATAACAAGCAAAATGACTTAATGAATCCAAGTAGTTCTCTTATG s panTro4.chr21 3678693 1438 + 32799110 TAGAGcagcagttcccaacctttttggcacagagaccggtttcatggaagtcaatttttccatgaatggagggggtagagactcacatcatcagacattagttagattctcataaggagcaggcaacctagatccctcacatacacagttcacgattgggttcatgctcctataagaatctaatgccaccactgatctgacaggaggcagagttcaggcagcagtgctcactggcctgccactcacctcttgctgtgcagcccagttcctaacaggccCAGGGTTTGGGAACCTCTGTGGTAGTGTCTGAGAAAGTAGATTTATGATGCTGTAGAAGAAATGCCAATATAAAAGCTGAGATGATACTTAACTCCTAACAAGTAACCAGAATTTTGCAGCCAAACCATTGCCTTATAAGTCCTTGGTTTCTACATGGCCAAAAACAGAATCCAAAAATTAGGCAGAGTTTAGCTGGAGGGACTCACACAGAGTGACCATATAGCTACAGAAGAGCTCTGCAGTGAGAGCTGTTGAGTGCAGAGTCACAGTCATTACTCAGAGCCCATCCTTTTATCTCTTCATTCATTTAGtgactgtgcatgctctttgccacttgc-ttttacccaggcaacattgtatagtcttgaaaattcaccaactgtcatgtcatatgtaagctc--------------------------------------------------------------------ttttctgattcatcacactgatttagaagactcttgtctgtacttccacggcaccatgtgaaaaatatctattatattccatattataccatgttttaactcttcttttaaagctgtgcatcttcctcaatgactgtaaattttttaagagaacacaccatttataattTCATGGC---------atatacatatatatatgtatata------------------------------------tatatatatCTCCATGTATATCTCATTAAATGTTGAGTGAATAAAATCAGGCTATAATTCTGGCAAAGTATATTAATGTTTTTAAGAC---------------TTCAACAATA----TGGCTTTTTAAACTTAAGCTGGTTTGACTGAG-TTTTTTATATCCTTCAAAAGCTTAAAGTCTCACCATCTAGAGTTAAAAGGAAATGCTTTGTGATGGAATCTCCATTTTTTTCATGTAAATTCAACCAAATAATTTTAATTTTACACATAAGAGATA-------------------------------------TTTTGGTCTTCTAAAATGTATC-TTTATTATTATGGAAGCGA--TTTTTTTTCCTTTACTGATTTTCTGGTTGGGAAGTATGGGCATTTTCTTTTGTTTTGAACTTACTTCCTTTTCTTTACGTGGTGGATTCAGCCTAAACATAAAATAAAAGTTAAGAGAGATAGAATCAATCATCAGGGAATAAAACAGAGAAAGGAATCAACAAACATGTCCTTCCTTTTTTTTTCTATGAATGATATAGTGAACAGAAATCAGGACAATAACAAGCAAAATGACTTAATGAATCCAAGTAGTTCTCTTATG i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16930985 1430 + 48394510 TACAGcagcagtccccaacctttttggcacagagaccggtttcatggaagtcaatttttccatgaatgga-ggggtagagactcacatcatcagacatcagttagattctcataaggagcatgcaacctagatccctcacatacacagttcacaatagggttcatgctcctataagaatctaatgctgccactgatctgacaggaggcagagttcaggcagcagtgctcactggcctgccactcacctcttgctgtgcagcccagttcctaaca--------------gAACCTCTGTGGTAGTGTCTGAGAAAGTAGATTTATGATGCTGTAGAAGAAATGCCAATATAAAAGCAGACATGACACTTAACTCCTAACAAGTAACCAGAATTTTGCAGCCAAACCATTGCCTTATAAGTCCTTGGTTTCTACATGGCCAAAAACAGAATCCAAAAATTAGGTAGAGTTTAGCTGGAGGGACTCACACAGAGTGACCATATAGCTACAGAAGAGCTCTGCAGTGAGAGCTGTTGAGTGCAGCGTCACAGTCATTACTCAGAGCCCACCCTTTTTTCTCTTCATTCATTTAGtgactgtgcatgctctttgccacttgc-ttttacccaggcaacattg--tagtcttgaaaattcagcaactgtcatctcatatgtaagctc--------------------------------------------------------------------ttttctgattcatcacactgatttagaagactcttgtctgtagttccacagtaccatgtgaaaaatatctattataatccatattatatcatgttttaactcttcttttaaagctgtgcatcttcctcaatgactgtaaattttttaagagaacacaccatTTACAATTTGATGGC---------atatacatatatatatatatata----------------------------------------------tccatgtatatCTCATTAAATGTTGAGTAAATAAAATCAGGCTATAATTCTGGCAAAGTATATTAATGTTTTTAAGACTTCAGAATCCAAGTTTTCAACAATATGTCTGTCTTTTTAAACTTAAGCTGGTTTGACTGAG-TTTTTTATATCCTTCAAAAGCTTAAAGTCTCACCATCTAGAATTAAAAGGAAATGCTTTCTGATGGAATCTCAATTTTTTTCATGTAAATTCAACCAAATAATTTTAATTTTACACATAAGAGATA-------------------------------------TTTTGGCCTTCTAAAGTGTATCTTTTATTATTATGGAAATGA--TTTTTTTTCCTTTACTGATTTTCCGGTTGGGAAATATGGGCATTTTCTTTTGTTTTGAACTTACTTCCTTTTCTTTATGTGGTGGATTCAGCCTAAACCTAAAATAAAAGTTAAGAGAGATAGAATCAATCATCAGGGAATAAAATAGAGAAAGTAATCAACAAACATGTCCTTCT-TTTTTTTTCTATGAATGATATAGTGAACAGAAATCAGGACAATAACAAGCAAAATGACTTAATGAATCCAAGTAGTTCTCTTATG i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4441404 1445 + 32716333 TAGAGcagcagtctccaacctttttggcacagagactggtttcatggaagtcaatttttccatgaatggagggggtagagactcacatcatcagacattagttagattctcataaggagcatgcaacctagatccctcacatacacagttcacaatagggttcatgctcctataagaatctaatgccgccactgatctgacaggaggcagagttcaggcagcagtgttcactggcctgccactcacctcttgctgtgtagcccagttcctaacaggtccacggtttgggaacctctgtggTAGTGTCTGAGAAAGTAGATTTATGATGCTGTAGAAGAAATGCCAATATAAAAGCAAAGATGATACTTAACTCCTAACAAGTAACCAGAATTTTGCAGCCAAACCATTGCCTTATAAGTCCTTGGTTTCTACGTGGCCAAAAACAGAACCCAAAAATTAGGTAGAGTTTAGCTGGAGGGACTCACACAGAGTGACCATATAGCTACAGAAGAGCTCTGCAGTGAGAGCTGTTGAGTGCAGAGTCACAGTCATTACCCAGAGCCCATCCTTTTTTCTTTTCATTCATTTAGtgactgtgcatgctctctgccacttgctttttacccaggcaacattgtatagtcttgaaaattcagcaactgtcatctcatatgtaagctc--------------------------------------------------------------------ttttgtgattcatcacactgatttagaagactcttgtctgtagttccacagtaccatgtgaaaaatatctattatattccatattatactatgttttaactc-----ttaaagctgtgcatcttcctcaatgactgtaaattttttaagagaacacaccatttataattTGATGGC---------atatacatatatatatatatata------------------------------------ta--------tCCGTGTATATCTCATTAAACGTTGAGTGAATAAAATCAGGCTATAATTCTGGCAAAGTATATTAATGTTTTTAAGACTTCAGAATTCAAATTTTCAACAATATGGCTGTCTTTTTAAACTTAAGCTGGTTTGACTGAG-TTTTTTATATCCTTCAAAAGCTTAAAGTCTCACCATCTAGAGTTAAAAGGAAATGCTTTCCGATGGAATCTCAATTTTTTTCATGTAAATTCAACCAAATAATTTTAATTTTACACATAAGAGATA-------------------------------------TTTTGGTCTCCCAAAATGTATC-TTTATTATTATGGAAATGA--TTTTTTTCCCTTTACTGATTTTCTGATTGGGAAATATGGGCATTTTCTTTTGTTTTGAACTTACTTCCTTTTCTTTATATGGTGGATTCATCCTAAACATAAAATAAAAGTTAAGAGAGATAGAATCAATCATCAGGGAATAAAATAGAGAAAGTAATCAACAAACATGTCCTTCCTTTTTTTTTCTATGAATGATATAGTGAACAGAAATCAGGACAATAACAAGCAAAATGACTTAATGAATCCAAGTAGTTCTCTTATG i nomLeu3.chr25 C 0 I 1563 s rheMac3.chr3 168554411 1463 - 198365852 GAGAGcagcagtccccgacttttttggcacagagaccagtttcatggaagtcaatttttccatgaatgga-ggggtagagactcacatcatcagacattagttagattctcataaggagcatgcaacctagatccctcacatacgcagttcacaatagagttcatgctcctataagaatctaatgccgccactgatctgacaggaggcagagttcaggcagtagtgctcactggcctgctactcacctcttgctgctcagcccagttcctaacacgccCAGGGTTTGGGAACCACTGTGGTAGTGTACGAGAAAGTAGATTTACGATGCTGTAGAAGAAATGCCAATATAAAAGCAGAGATAATACTTAACTCCTAACAAGTAACCATAATTTTGCAACCAAACCATTGCCTTACAAGTCCTTGGTTCCTACATGGGCAAAAATGGAACCC-AAAATCAGGTAGAGTTTAGCTAGAGGGACTCACACAGAGTGACC--ATAGCTACAGAAGAGCTCTGCAGTGAGAGCTGTTGAGTGCAGAGTCACAGTCATTGCTCAGAGCCCATCCTTT--TCTCTTCTTTCATTTAGtgactgtacatgctctttgccacttgc-ttttacccagacaacgttgtatagtcttgaaaattcagcaactgtcatctcatatgtaagctc--------------------------------------------------------------------ttttctgattcaccacactgatttagaacactcttgtctgtagttccacagtaccatgtgaaaaatatctattatattccatattataccatgttttaacacttcttttaaagctgtgcatcctcctcaatgactgtaaattttttaagagAACACACTATTTATAATTTGATGGC-----------atatatatatatatacacaca--------------------------------cacatatatatatattcatgtatatCTCATTAAATGTTCAGTAAATAAAATCAGGCTATAAGTCTGGCACAGTATATTAATGTTTTTAAGACTTCAGAGTTCAAGTTTTCAACAGTATACCTGTCTTTTTTAACTTAAGCTGGTTTGACTGAG-TTTTTTATATCTTTCAAAAGCTTAAAGTCTCACCATCTAGAGTTAAAAGGAAATGTTTTCTGATGGGTTCTCAATTTTTTTCATGTAAATTCAACCAAATAATTTTAATTTTACACATAAGAGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN---------------------------TTATTATGGAAAGGA-TTTTTTTTTCCTTTACTGATCTTGTGGTTGGGAAATATGGGCATTTTCTTTTGTTTTGAACTTACTTCCTTTTCTTTAAGTGGTAGATTCAACCTAAACCTAAAATAAAAGTTAAAAGAGATAGAATCAACCATCAGGGAATAAAATAGAGAAAGTAATCAACAAACATGTCCTCCC--TTTTTTTCTATGAATGATATTGTGAACAGAAATCAGGCCAATAACAAGGAAAAAGACTTAATGAATCAAAGTAGTTCTCTTAAG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162218880 1454 - 192294377 GAGAGcagcagtccccaacttttttggcacagagaccagtttcatggaagtcaatttttccatgaatgga-ggggtagagactcacatcatcagacattagttagattctcataaggagcatgcaacctagatccctcacatacgcagttcacaatagagttcatgctcctataagaatctaatgccgccactgatctgacaggaggcagagttcaggcagtagtgctcactggcctgctactcacctcttgctgctcagcccagttcctaacacgccCAGGGTTTGGGAACCACTGTGGTAGTGTACGAGAAAGTAGATTTACGATGCTGTAGAAGAAATGCCAATATAAAAGCAGAGATAATACTTAACTCCTAACAAGTAACCAGAATTTTGCAACCAAACCATTGCCTTACAAGTCCTTGGTTTCTACATGGGCAAAAATGGAACCC-AAAATCAGGTAGAGTTTAGCTAGAGGGACTCACACAGAGTGACC--ATAGCTACAGAAGAGCTCTGCAGTGAGAGCTGTTGAGTGCAGAGTCACAGTCATTGCTCAGAGCCCATCCTTT--TCTCTTCTTTCATTTAGtgactgtacatgctctttgccacttgc-ttttacccagacaacgttgtatagtcttgaaaattcagcaactgtcatctcatatgtaagctc--------------------------------------------------------------------ttttctgattcaccacactgatttagaacactcttgtctgtagttccacagtaccatgtgaaaaatatctattatattccatattataccatgttttaacacttcttttaaagctgtgcatcctcctcaatgactgtaaattttttaagagAACACACTATTTATAATTTGATGGC---------atatatatatatatatacacaca--------------------------------cacatatatatatattcatgtatatCTCATTAAATGTTCAGTAAATAAAATCAGGCTATAAGTCTGGCACAGTATATTAATGTTTTTAAGACTTCAGAGTTCAAGTTTTCAACAGTATACCTGTCTTTTTTAACTTAAGCTGGTTTGACTGAG-TTTTTTATATCTTTCAAAAGCTTAAAGTCTCACCATCTAGAGTTAAAAGGAAATGTTTTCTGATGGGATCTCAATTTTTTTCATGTAAATTCAACCAAATAATTTTAATTTTACACATAAGAGATA-------------------------------------TTTTGGTCTTCTACAATGAATC-TTTATTATTATGGAAAGGA-TTTTTTTTTCCTTTACTGATCTTGTGGTTGGGAAATATGGGCATTTTCTTTTGTTTTGCACTTACTTCCTTTTCTTTAAGTGGTAGATTCAGCCTAAACCTAAAATAAAAGTTAAAAGAGATAGAATCAACCATCAGGGAATAAAATAGAGAAAGTAATCAACAAACATGTCCTCCC--TTTTTTTCTATGAATGATATTGTGAACAGAAATCAGGCCAATAACAAGCAAAAAGACTTAATGAATCAAAGTAGTTCTCTTAAG i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150902480 1486 - 180432695 gagagcagcagtccccaacttttttggcacagagaccagtttcatggaagtcAATTTTTCCATGAATGGA-GGGGTAGAGACTCACATCATCAgacattagttagattctcataaggagcatgcaacctagatccctcacatatgcagttcacaatagagttcatgctcctataagaatctaatgccgccactgatctgacaggaggcagagttcaggcAGTAGTGCTCACTGGCCTGCTACTCACCTCTTGCTGctcagcccagttcctaacacgCCCAGGGTTTGGGAACCGCTGTGGTAGTGTACGAGAAAGTAGATTTACGATGCTGTAGAAGAAATGCCAATATAAAAGCAGAGATAATACTTAACTCCTAACAAGTAACCAGAATTTTGCAACCAAACCATTGCCTTACAAGTCCTTGGTTTCTACATGGGCAAAAATGGAACCC-AAAATCAGGTAGAGTTTAGCTAGAGGGACTCACACAGAGTGACC--ATAGCTACAGAAGAGCTCTGCAGTGAGAGCTGTTGAGTGCAGAGTCACAGTCATTGCTCAGAGCccatccttt--tctcttctttcatttagtgACTGTACATGCTCTTTGCCACTTGC-TTTTACCCAGGCAACGTTGTATAGTCTTGAAAATTCAGCAACTGTCATCTCATATGTAAGCTCTTTTCTGATTCATCACACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttttCTGATTCATCACACTGATTTAGAAGACTCTTGTCTGTAGTTCCACAGTACCATGtgaaaaatatctattatatTCCATATTATACCATGTTTTAACTCTTCTTTTAAAGCTGTGCATCCTCCTCAATGACTGTAAATTTTTTAAGAGAACACACTATTTATAATTTGATGGC-----------------------------------------------------------------------ATATATATCCATGTATATCTCATTAAATGTTGAGTAAATAAAATCAGGCTATAAGTCTGGCACAGtatattaatgtttttaagaCTTCAGAATTCAAGTTTTCAACAGTATGCCTGTCTTTTTAAACTTAAGCTTGTTTGACTGAG-TTTTTTATATCCTTCAAAAGCTTAAAGTCTCACCATCTAGAGTTAAAAGGAAATGCTTTCTGATGGGAtctcaatttttttcatgtaaattcaacaaaataattttaattttacacatAAGAGATA-------------------------------------TTTTGGTCTTCTACAATGAATC-TTTATTATTatggaaagga-tttttttttcctttactgatCTTGTGGTTGGGAAATATGGGCATTTTCTTT--GTTTGAACTTACTTC--TTTCTTTAAGTGGTAGATTCagct--aaactaaaataaaagttaaaagagatAGAATCAACCACCagggaataaaatagagaaagtaaTCAACAAAcatgtccttcc--tttttttctatgaATGATATCGTGAACAGAAATCAGGCCAAAAACAAGCGAAATGACTTAATGAATCAAAGTAGTTCTCTTAAG i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15003469 1464 - 90373283 GAGAGcagcagtccccaacttttttggcacagagaccagtttcatggaagtcaatttttccatgaatgga-ggggtagagactcacatcatcagacattagttagattctcataaggagcatgcaacctagatccctcacatatgcagttcacaatagggttcatgcgcctataagaatctaatgccgccactgatctgacaggaggcagagttcaggcagtagtgctcactggcctgctactcacctcttgctgctcagcccagttcctaacacgccCAGGGTTTGGGAACCGCTGTGGTAGTGTACGAGAAAGTAGATTTACAATGCTGTA-AAGAAATGCCAATATAAAAGCAGAGATAATACTTAACTCCTAACAAGTAACCAGAATTTTGCAGCCAAACCATTGCCTTACAAGTCCTTGGTTTCTACATGGCCAAAAACAGAACCCAAAAATCAGGTAGAGTTTAGCTGGAGGGACTCGCACAGAGTGACC--ATAGCTACAGAAGAGCTCTGCAGTGAGAGCTGTTGAGTGCAGAGTCACAGTCATTGCTCAGAGCCCATCCTTT--TCTCTTCATTCATTTAGTGACTGTACATGCTCTTTGCCACTTGC-TTTTACCCAGGCAACGTTGTATAGTCTTGAAAATTCAGCAACTGTCATCTCATATGTAAGCTC--------------------------------------------------------------------TTTTCTGATTCATCACACTGATTTAGAAGACTCTTATCTGTAGTTCCACAGTACCATGTGAAAAATATCTATTATATTCCATATTATACCATGTTTTAACTCTTCTTTTAAAGCTGTGCATCCTCCTCAATGACTGTACA-TTTTTAAGAGAACACACCATTTAAAATTTGATGGCatatattatatatatatatttatatatatata--------------------------------tatatatatatatatCCATGTATATCTCATTCAATGTTGAGTAAATAAAATCAGGCTATAAGTCTGGCACAGTATACTAATGTTTTTAAGACTTCAGAATTCAAGTTTTCAACAGTATGCCTGTCTTTTTAAACTTAAGCTGGTTTGACTGAGTTTTTTTATATCCTTCAAAAGCTTAAAATCCCACCATCTAGAGTTAAAAGGAAATGCTTTCTGATGGGATCTCAATTTTTTTCATGTAAATTCAAGCAAATAATTTTAATTTTACACATAAGAGATA-------------------------------------TTTTGGTCTTCTACAATGAATC-TTTATTATTATGGAAAGGATTTTTTTTTTCCTTTACTGATCTTCTGGTTGGGAAATATGGGCATTTTCTTTTGTTTTGAACTTACTTCCTTTTCTTTAAGTGGTAGATTCAGCCTAAACCTAAAATAAAAGTTAAAAGAGATAGAATCAACCACCAGGGAATAAAATAGAGAAAGTAATCAACAAACATGTCCTTCC--TTTTTTTCTATGAATGATATAGTGAACAGAAATCAGGCCAAAAACAAGCGAAATGACTTAATGAATCAAAGTAGTTCTCTTAAG i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I a score=1694284.000000 s hg38.chr21_KI270874v1_alt 67300 955 + 166743 TTGGCTTAGAATTATAGCATGTTGAATCCAATGAGTGATTAATATTCAATACAGTTGTGAACGCTCCATGTATGAAAAATTGTGTATGGTATAATTCAGAAATAAAGGCCAAAGCTCCACTAAGTTAAAATTGGCTAGAGTTGCACTAGATTTAAACTA-TTAAAAAATTCACAAAACTTAACCCAGTTTTATATATGACACCCAAACTTTGCACTGGTCAAATTTTGTCTTAAAAATGTGAGGGTTGGAGCTGTTTCTTACAACTTAAGCTATATGTAGACAAATAGCTTCATCAGTCCACATAATATTCCCATTGTTTTAATGTTGTGGGCTACATCTGGAGCTATCAGAATAAATCTGAATACTGCTTCAAGCTGGGGGTGTAAGCTAACACCACAAAGAATCTGGCTCACTGTAGGAAGGCCAGGACTCGCAAAAGGCCAGGTGACAGTGAAGCAGGCTTGAAAGCATAAGAGTGTCATGTTCCTTGTTCATTTCATACCCTACTAATGTTTCCATTCATGTGTGAGCCCCAGCAGCAGAAAATCTAGTAGAACATAGAGATAGAGAGTGCCAACATTTCATCAGGTGAGCAGCAGTCATATTCAGATACCTTTCCAGTATAAGCGGGATCGGCCAGCATTCTGTAAGGAGAGGAGGAAAGAATAGGCCCTGATGCAGAGATCAGAAAGATCTAAGAAGATTCCCAGCCAAGAAATCAACAGCCACTTAGGGCCTTTGCTGAAAAGGAGGACAAGGGAATTGCTGAATTGTCCCCAATAGGATGTTTATGTTAGAGATTCTGAAAAAGAGCCAAGGCTGACTTATGGCAAGAAAGTCTTCCTACTGGACTCTAGTGAATAATGTTGTGTATGtgagaactctgcagcaactgcatcacagaacggtatctccctctcccaattctgcttccttcaccagcctacagagctgt s panTro4.chr21 3680131 955 + 32799110 TTGGCTTAGAATTATAGCATGTTGAATCCAATGAGTGATTAATTTTCAATACAGTTGTGAACGCTCCATGTATGAAAAATTGTGTATGGTATAATTCAGAAATAAAGGCCAAAGCTCCACTAAGTTAAACTTGGCTAGAGTTGCACTAGATTTAAACTA-TTAAAAAATTCACAAAACTTAACCCAGTTTTATATATGACACCCAAACTTTGCACTGGTCAAATTTTGTCTTAAAAATGTGAGGGCTGGAGCTGTTTCTTACAACTTAAGCTATATGTAGACAAATAGCTTCATCAGTCCACATAATATTCCCATTGTTTTAATGTTGTGGGTTACATCTGGAGCTATCAGAATAAATCTGAATACTGCTTCAAGCTGGGGGTGTAAGCTAACACTGCAAAGAATCTGGCTCACTGTAGGAAGGCCAGGACTCGCAAAAGGCCAGGTGACAGTGAAGCAGGCTTGAAAGCATAACAGTGTCATGTTCCTTGTTCATTTCATACCCTACTAATGTTTCCATTCATGTGTGAGCCCCAGTAGCAGAAAATCTAGTAGAACATAGAGATAGAGAGTGCCAACATTTCATCAGGTGAGCAGCAGTCATATTCAGATACCTTTCCAGTATAAGCAGGATCAGCCAGCATTCTGTAAGGAGAGGAGGGAAGAATAGGCCTTGATGCAGAGATCAGAAAGATCTAAGAAGATTCCCAGCCAAGAAATCAACAGCCACTTAGGGCCTTTGCTGAAAAGGAGGACAAGGGAATTGCTGAATTGTCTCCAATAGGATGTTTATGTTAGAGATTCTGAAAAACAGCCAAGGCTGACTTATGGCAAGAAAGTCTTCCTACTGGACTCCAGTGAATAATGTCGTGTATGtgagaactctgcagcaactgcatcacagaacggtatctccctctcccaattctgcttccttcaccagcctacagagctgt i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16932415 955 + 48394510 TTGGCTTAGAATTATAGCATGTTGAATCCAATGAGTGATTAATTTTCAATACAGTTGTGAACACTCCATGTAAGAAAAATTGTGTATAGTATAATTCAGAAATAAAAGCAAAAGCTCCACTAAGTTCAACTTGGCTAGAGTTGCACTAGATTTAAACTA-TTAAAAAATTCACAAAACCTCACCCAGTTTTATATATGACACCCAAACTTTGTACTGGTCAAATTTTGTCTTAAAAATGTGAGGGCTGGAGCTGTTTCTTACAACTTAAGCTATAGGTAGACAAATAGCTTCATCAGTCCACAGAATATTCCCATTGTTTTAATGTTGTGGGCTACATCTGGGGCTATCAGAATAAATCTGAATACTGCTTCAAGCTGGGGGAGTAAGCTAAGGCCACAAAGAATCTGGCTCACTGCAGGAAGGCCAGGACTCGCAAAAGGCCAGGTGACAGTGAAGCAGGCTTGAAAGCATAAGAGTGCCATGTTCCTTATTCGTTTCATACCCTACTAATGTTTCCATTCCTGTGTGAGCCCCAGTAGCAGAAAATCTAGTAGAACATAGAGATAGAGAGTGCCAACATTTCATCAGGTGAGCAGCAGTCATATTCAGATACCTTTCCGGTATAAGCAGGATCAGCCAGCATTCTATAAGGAGAGCAGAGAAGAATAGGCCCTGAGGCAGAGATCAGAAAGATCTAAGAAAATTCCCAGCCAAGAAACCAATAGCCACTTAGTGCCTTTGCTGAAAAGGAGGACAAGGGAATTGCTGAATTGTCTCCAATAGGATGTTTATGTTAGAGATTCTGAAAAAGAGCCAAGGCTGACTTATGGCAAGAAAGTCCTCCTACTGGACTCTAGTGAATAATGTTGTGTATGtgagaactctgcagcaactgcatcacagaacggtatctccctttcccaattctgcttccttcaccagcctacagagttgt i ponAbe2.chr21 C 0 C 0 s rheMac3.chr3 168555874 953 - 198365852 TTGGCTTAGAATTATAGCATGTTGAATCCAATGAGTGATTAATTTTCAATACAGTTATGAACCCTCCATGTATAAAAAATTGTGTACAGTGTAATTCAGAAATAAAGACCAAAGTTCCACTAACTTCAACTTGGCTAGAGTTGCACTAGATTTAAACTATTTAAAAAATTCATAAAATTTCACCCAGTTTTGTATATGACACCCAAACTTTGCACTGGTCAAATTTCATCTTTAAAATGTGAGGGCTGAACCTCTTTCTTACAACTGAAGCTATAGGTAGAC-AATAGCTTCATCGGTCCACAGAACATTCCCATTGTTTTAATGCTGTGGGCTACCTCTGGGGCTGTCAGAATAAATCTGAATACTGCTTCAAGCTGGGGGAGTAAGCTAAGGCCGCAAAGAATTTGGCTCACTGTAGGAAGGCCAGGACTCACAAAAGGCCAGGTGACAGTGGAGCAGGCTTGAAGGCCTAGAAGTCTCATGTTCCTTATTCGTTTCATACCCTACTAATGTATCCATTCATGTGTGAGCCTCAGTAGCAGAAAATCTAGAAGAACATAGAGATAGAGAGTGCCAACATTTCCTCAAGTGAGCAGCAGTCATATTCAGATAACTTCCCAGTATAAGT-GGATTGGCCAGCATT-TACAAGCAGAGGAAGGAAGAATAGGCCCTGAGGCAGAGATCAGAAAGCTCTAAGAAGATTCCCAGCCAAGGAACCAATAGCCACTTAGGGCCTTTGCGGAAAAGGAGGACAGGGGAATTACTGAATTGTCTCCAATAGGATGTTTATGTTAGAGATTCTGAAAAAGAACCAAGGCTGACTTATGGCAAGAAAGTCTTCCTATTGGACTCTAGTGAATAATGTTGTGTATGtgagaactctgcagcaactgcatcacagagcaatgtctccctctcccaattctgcttccttcaccagcctacagagttgt i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162220334 953 - 192294377 TTGGCTTAGAATTATAGCATGTTGAATCCAATGAGTGATTAATTTTCAATACAGTTATGAACCCTCCATGTATAAAAAATTGTGTACAGTGTAATTCAGAAATAAAGACCAAAGTTCCACTAACTTCAACTTGGCTAGAGTTGCACTAGATTTAAACTATTTAAAAAATTCATAAAATTTCACCCAGTTTTGTATATGACACCCAAACTTTGCACTGGTCAAATTTCATCTTTAAAATGTGAGGGCTGAACCTCTTTCTTACAACTGAAGCTATAGGTAGAC-AATAGCTTCATCGGTCCACAGAACATTCCCATTGTTTTAATGCTGTGGGCTACCTCTGGGGCTGTCAGAATAAATCTGAATACTGCTTCAAGCTGGGGGAGTAAGCTAAGGCAGCAAAGAATTTGGCTCACTGTAGGAAGGCCAGGACTCACAAAAGGCCAGGTGACAGTGGAGCAGGCTTGAAGGCCTAGGAGTCTCATGTTCCTTATTCGTTTCATACCCTACTAATGTATCCATTCATGTGTGAGCCTCAGTAGCAGAAAATCTAGAAGAACATAGAGATAGAGAGTGCCAACATTTCCTCAAGTGAGCAGCAGTCATATTCAGATAACTTCCCAGTATAAGC-GGATTGGCCAGCATT-TACAAGCAGAGGAGGGAAGAATAGGCCCTGAGGCAGAGATCAGAAAGCTCTAAGAAGATTCCCAGCCAAGGAACCAATAGCCACTTAGGGCCTTTGCGGAAAAGGAGGACAGGGGAATTACTGAATTGTCTCCAATAGGATGTTTATGTTAGAGATTCTGAAAAAGAACCAAGGCTGACTTATGGCAAGAAAGTCTTCCTATTGGACTCTAGTGAATAATGTTGTGTATGtgagaactctgcagcaactgcatcacagagcaatgtctccctctcccaattctgcttccttcaccagcctatagagttgt i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150903966 951 - 180432695 TTGGCTTAGAATTATAGCATATTGAATCCAATGAGTGATTAATTTTCAATACAGTTGTGAACACTCCATGTATGAAAAATTGTGTACAGTGTAATTCAGAAATAAAGACCAAAGCTCCACTAACTTCAACTTGGCTAGAGTTGCACTAgatttaaactatttaaaaaattcataaaacttCACCCAGTTTTGTATATGACACCCAAACTTTGCACTGGTcaaatttcatcttaaaaatgTGAGGACTGAACCTCTTTCTTACAACTTAAGCTATAGGTAAACAAATGACTTCATCAGTCCGCAGAACATTCCCATTGTTTTAATGCTGTGGGCTACCTCTGGGGCTGTCAGAATAAATCTGAATACTGCTTCAAGCTGGGGGAGTAAGCTAAGGCTGCAAAGAATTTGGCTCACTGTAGGAAGGCCAGGACTCACAAAAGGCCAGGTGACAGTGGAGCAGGCTTGAAGGCCTAGGAGTCTCATGTTCCTTATTCGTTTCATACCCTACTAATGTATCCATTCATGTGTGAGCCTCAGTAGCAGAAAATCT---AGaacatagagatagaaagtgCCAACATTTCCTCAAGTGAGCAGCAGTCATATTCAGATAACTTCCCAGTATAAGC-GGATTGGCCAGCATT-TACAAGCAGAGGAGGGAAGAATAGGCCCTGAGGCAGAGATCAGAAAGATCTAAGAAGATTCCCAGCCAAGGAACCAATAGCCACTTAGGGCCTTTGCTGAAAAGGAGGACAGGGGAATTACTGAATTGTCTCCAATAGGACGTTTATGTTAGAGATTCTGAAAAACAGCCAAGGCTGACTTATGGCAAGAAAGCCTTCCTACTGGACTCTAGTGAATAATGTTGTGTATGTGAGAACTCTGCAGCAACTGCAACCCAGAGCAATGTCTCCCTCTCCCAATTCTGCTTCCTTCACCAGCCTACAGAGTTGT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15004933 954 - 90373283 TTGGCTTAGAATTATAGCATGTTGAATCCAATGAGTGATTAATTTTCAATACAGTTATGAACCCTCCATGTATGAAAAATTGTGTACAGTATAATTCAGAAACAAAGACCAAAGCTCCACTAACTTCAACTTGACTAGAGTTGCACTAGATTTAAACTATTTTTAAAATTCATAAAACTTCACCCAGTTTTGTATATGACACCCAAACTTTGCACTGGTCAAATTTCATCTTAAAAATATGCGGGCCGAACCTCTTTCTTACTACTTAAGCTATAGGTAAACAAATAACTTCATCAGTCCACAGAACATTCCCATTGTTTTAATGCTATGGGCTACCTCTGGGGCTGCCAGAATAAATCTGAATACTGCTTCAAGCTGGGGGAGTAAGCTAAGGCCGCAAAGAATTTGGCTCACTGTAGGAAGGCCAGGACTCGCAAAAGGCCAGGTGACAGTGGAGCAGGCTTGAAGGCCTAGGAGTCTCATGTTCCTTATTCGTTTCATACCCTACTAATGTATCCATTCATGTGTGAGCCTCAGTAGCAGAAAATCTAGAAGAACATAGAGATAGAGAGTGCCAACATTTCCTCAAGTGAGCAGCAGTCATATTCAGATAACTTCCCAGTATAAGC-AGATCGGTCAGCATT-TACAAGCAGAGGAGGGAAGAATAGGCCCTGAGGCAGAGATCAGAAAGATCTAAGAAGATTCCCAGCCAAGAAACCAATAGCCACTTAGGGCCTTTGCTGAAAAGAAGGACAGGTGAATTACTGAATTGTCTCCAATAGGACGTTTATGTTAGAGATTCTGAAAAAGAGCCAAGGCTGACTTATGGCAAGAAAGTCTTCCTACTGGACTCTAGTGAATAATGTTGTGTATGtgagaactctgcagcaactgcatcacagagcaatgtctccttctcccaattctgcttccttcaccagcctacagagttgt i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=1147173.000000 s hg38.chr21_KI270874v1_alt 68255 565 + 166743 ttctgaaaacactccTGTAGACTATCAAGTCAGTGTGTGAGAAGTTCTGTTATAGCACATTTATGTATTTTCCCTTTTCTT----CCTTTCTTCTTTCTAATTAGACAAACCTACAAAGGATTCGAAGTAGCTATGGAACACCATATAGGAAATTAAATACCAGCAGTTAGAAAAATCTTTCTTCCTTACTTACAACAAAACAATGTTAATGTTAGCTACAGTTTTATTCTAAAGAAAAAAAAAGAATGCAAATTTTATTTATTTTTGATCATTCAAAACATTTAAATCTATAACTGGTATGGTCTCTGGAATCTAGACTTAGAA-TTTAAATTAGCTTAAAACATTATTTCTGCTAACTCTGCAGTATCAACATAATTACTAAGGAAAATTTAAATTTTCTATTACACTGTAATTTCTCCTCCATTCTACAGTGAGATAAACTGCAGCCTCTTAAGCTTTCAAATACACTAAACTTTCTAAAGTGAATTTT-AAAAAGGAAAAACTGGATTATTTTAGCAAATCAATAATTATTTACAAGtagattcatagatcagat-------tagactagattc s panTro4.chr21 3681086 560 + 32799110 ttctgaaaacactccTGTAGACTATCAAGTCAGTGTGTGAGAAGTTCAGTTATAGCACATTTATGTATTTTCCCTTTTCTT----CCTTTCTTCTTTCTAATTAGACAAACCTTCAAAGGATTTGAGGTAGCTATGGAACACCATATAGGAAATTAAATACCAGCAGTTAGAAATATCTTTCTTCCTTACTTACAACAAAACAATGTTAACGTTAGCTACAGTTTTATTCTAAAGAAAAAAAAAGAATGCAAATTTTATTTATTTTTGATCATTCAAAACATTTCAATCTATAACTGGTATGGTCTCTGAGATCTAGACTTAGAATTTTAAATTAGCTTAAAACATTATTTCTGCTAACTCTACAGTATCAACATAATTACTAAGGAAAATTTAAATTTTCTATTACACTGTAATTTCTCCTCCATTCTACAGTGAGATAAACTGCAGCCTCTTAAGCTTTCAAATACACTAAACTTTCT-AAGTGAATTTT-AAAAAGGAAAAACTGGATTATTTTAGCAAATCAATAATTATTTACAAGTAGATTCATAGATC------------AGACTAGATTC i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16933370 562 + 48394510 ttctgaaaacactccTGTAGACTATCAAGTCAGTGTGTGAGAAGTTCTGTTATAGCACATTTATGTATTTTCCCTTTTCTT----CCTTTCTTCTTTCTAATTAAACAAACCTACAAAGGATTTGAGGTAGCTATGGAACACCATATAGGAAACCAAATACCAGCAGTTAGAAAAA----TCTTCCTTACTTACAACAAAACAATGTTAATGTTAGCTACAGTTTTATTCTAAAG-AAAAAAAAGAATGCAAATTTTATTTATTTTTGATCATTCAAAACATTTCAATCTATAACTGGTATGGTCTCTGGAATCTAGACTTAGAATTTTAAATTAGCTTAAAACATTATTTCTACTAACTATACAATATCAACGTAATTACTAAGGAAAATTTAAATTTTCTATTACACTGTAATTTCTCCTCCATTCTACAGTGAGATAAACTGCAGCCTCTTAAGCTTTCAAATACACTAAACTTTCTGAAGTGAATTTTAAAAAAGGAAAAATTGGATTATTTTAGCAAATCAATAATTATTTACAAGTAGATTCATAGATCAGAT-------TAGACTAGATTG i ponAbe2.chr21 C 0 C 0 s rheMac3.chr3 168556827 555 - 198365852 ttctgaaaacactccTGTAGACCACCAAGTCAGTGTGTG---AGTTTTGTTATAGCATATTTATGTATTTTTCATTTTCTT----CCTTTCTTCTTTCTAATTTGACAAACCTACAAAGGATTTGAGGTAGCTATGGTACACCTTATAGGAAATTAAATACCACCAGTTAGATAAATCTTTCTTCCTTCCTTACAACAAAACAATGTTAATGTTAGCTACAGTTTTATTCTAAAG-AAAAAAAAGAATGCAAATTTTATTCATTTTTGATCATTCAAAACATTTCAATCTATAACTGGTATGGTCTCTGGAATCTAGACTTAGAATTTTAAATTAGCTTAAAACATTATTTCTGCTAGCTTTACAGTATCAACATAATTACTAAGGAAAATTTATATTTTCTATTACACTGTAATTTTTTTTTT---------TGAGATAAACCACAGCCTCTTAAGCTTTCAAATACACTAAACTTTCTAAAGTGAATTTT-AAAAAGGAAAAATTGAATTATTTTAGCAAATCAATAATTATTTACAAGTAGATTCATAGATCAGATA-----ATAGACTAGATTC i rheMac3.chr3 C 0 M 304 s macFas5.chr3 162221287 564 - 192294377 ttctgaaaacactccTGTAGACCACCAAGTCAGTGTGTG---AGTTTTGTTATAGCATATTTATGTATTTTTCATTTTCTT----CCTTTCTTCTTTCTAATTTGACAAACCTACAAAGGATTTGAGGTAGCTATGGTACACCTTATAGGAAATTAAATACCACCAGTTAGATAAATCTTTCTTCCTTCCTTACAACAAAACAATGTTAATGTTAGCTACAGTTTTATTCTAAAG-AAAAAAAAGAATGCAAATTTTATTCATTTTTGATCATTCAAAACATTTCAATCTATAACTGGTATGGTCTCTGGAATCTAGACTTAGAATTTTAAATTAGCTTAAAACATTATTTCTGCTAGCTTTACAGTATCAACATAATTACTAAGGAAAATTTAAATTTTCTATTACACTGTAATTTCTCCTCCATTCTGCAGTGAGATAAACCACAGCCTCTTAAGCTTTCAAATACACTAAACTTTCTAAAGTGAATTTT-AAAAAGGAAAAATTGAATTATTTTAGCAAATCAATAATTATTTACAAGTAGATTCATAGATCAGATA-----ATAGACTAGATTC i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150904917 562 - 180432695 TTCTGAAAACACTCCTGTAGACCACCAAGTCAGTGTGTG---AGTTTTGTTATagcatatttatgtatttttcattttctt----cctttcttctttctaatttgaCAAACCTACAAAGGATTTGAGGTAGCTATGGTACACCTTATAGGAAATTAAATACCACCagttagataaatctttcttccttccttacaACAAAACAATGTTAATGTTAGCTACAGttttattctaaag-aaaaaaaagaatgcaaattttattcatttttgatcATTCAAAACATTTCAATCTATAACTGGTATGGTCTCTGGAATCTAGacttagaattttaaattagcttaaaacattatttctgctAGCTTTACAGTATCAACATAATTACtaaggaaaatttaaattttctattacaCTGTAATTTCTCCTCCATTCTGCAGTGAGATAAACCGCAGCCTCTTAAGCTTTCAAATACACTAAACTTTctaaagtgaatttt-aaaaaggaaaaattgaattattttagcaaatcaataattatttacaaGTAGATTCATAGATCAGAT-------TAGACTAGATTC i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15005887 560 - 90373283 ttctgaaaacactcccGTAGACTATCAAGTCAGTGTGT-----GTTTTGTTATAGCATATTTATGTATTTTTCATTTTCTT----CCTTTCTTCTTTCTAATTTGACAAACCTGCAAAGGATTTGAGGCAGCTATGGTACACCTTATAGGAAATTAAATACCACCAGTTAGATAAATCTTTCTTCCTTCCTTACATCAAAACAATGTTAACATTAGCTACAGTTTTATTCTAAAG-AAAAAAAAGAATGCAAATTTTATTCATTTTTGATCATTCAAAACATTTCAATCTATAACTGGTATGGTCTCTGGAATCTAGACTTAGAATTTTAAATTAGCTTAAAACATTATTTCTGCTAGCTTTACAGTATCAACATAATTACTAAGGAAAATTTAAATTTTCTATTATACTGTAATTTCTCCTCCATTCCACAGTGAGATAAACTGCAGCCTCTTAAGCTTTCAAATACACTAAACTTTCTAAAGTGAATTTT-AAAAAGGAAAAATTGAATTATTTTAGCAAATCAATAATTATTTACAAGtagattcatagatcagat-------tagactagattt i chlSab2.chr2 C 0 C 0 s canFam3.chr31 13820355 550 + 39895921 TTTTTAAAGCACTCCTGTGGAAAATCAAGTCACTCTGAG---AGGTTTACTATAGCATATTTAAGAGTTTTTCCATTCCTTCCTACCTTCCTTTCTTCTAATTAGAGAAATCCACAAAGGATTTGAAGCAGCAGCAGTATGCCATATAGGAAAAC-----TCAGTAGTCAGCCATAAATTTTTTCCTTCCTTAT-----GACAGTGTTCACTTTAATTAC-TTATTATTCTGAAG-AAAAAAAAG-ACATAAATTGTATTTAGTTTGGATCATTCAAAACATTTTAATCTATAATTGACATGGTCTATCACAGCTAGACTCATAATTTT------GCTTTAAAA---GTTTCTGTTAGTTCAATAGTATCAACCTAAACCCTAAGGAAAATCTGAA-TTTCTATTAGAATGTAACTTCTCTTCTATTTTATATGGAGATATACTGAGGTCTCTTATGATTTCAAACTCACTAAACTTTCTGAAGTGAATTTT-AAAGAGTAAAACTTGGATTGTTTCAACAAATCAACTACTATTTAAAGATAGGTTTAAAAAAAAGATAGGTTTATAGAAAAGATG- i canFam3.chr31 I 453 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=109087.000000 s hg38.chr21_KI270874v1_alt 68820 90 + 166743 ---------------gactgatagatATAACACATTCATAAGAAACCAAAATTGTTGGATTCAAATAGTAAAAGTAACTAAGTAGATAAATTCAGACTTCCAGAT s panTro4.chr21 3681646 90 + 32799110 ---------------GATTGATAGATATAACACATTCATAAGAAAACAAAATTGTTGGATTCAAATGGTAAAAGTAACTAAGTAGATAAATTCAGACTTCCAGAT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16933932 90 + 48394510 ---------------GTTTGATAGATATAACACATTCATAAGAAAACAAAATTGTTGGATTCAAATGGTAAAAGTAACTAAGTAGATAAATTCAGACTTCCAGAT i ponAbe2.chr21 C 0 I 4259 s macFas5.chr3 162221851 85 - 192294377 ---------------GATTGATATATATAACACATTCCTAAGAAAA-AAAATTATTGGATTCAAATGGTAAAAGTAACTAAG----TAAATTGAGACTTCCAGAT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150905479 85 - 180432695 ---------------GATTGATAGATATAACACattcctaagaaaa-aaaattgttggatTCAAATGGTAAAAGTAACTAAG----TAAATTGAGACTTCCAGAT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15006447 85 - 90373283 ---------------gattgatagatACAACACATTCCTAAGAAAA-AAAATTGTTGGATTCAAATAGTAAAAGTAACTAAG----TAAAATGAGACTTCCAGAT i chlSab2.chr2 C 0 C 0 s canFam3.chr31 13820905 83 + 39895921 GACTGATGGATAGATAAATGACAGATATAACACATTCATGAAAAAT--AAATGGTT-AATTTAGATGATAAAAACA-------------------ACTCTTAGAT i canFam3.chr31 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78116694 9034 + 98207768 I e rheMac3.chr3 168557382 304 - 198365852 M e nomLeu3.chr25 4442849 1563 + 32716333 I a score=46677.000000 s hg38.chr21_KI270874v1_alt 68910 27 + 166743 GAAATATGAATTCTTTATGAAATAATA s panTro4.chr21 3681736 27 + 32799110 GAAATATGAATTCTTTATGAAATAATA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16938281 27 + 48394510 GAAATATGAATTCTTTATGAAATAATA i ponAbe2.chr21 I 4259 C 0 s macFas5.chr3 162221936 27 - 192294377 GAAATATGAATTCTTTATGAAATAATA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150905564 27 - 180432695 GAAATATGAATTCTTTATGAAATAATA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15006532 27 - 90373283 GAAATACGAATTCTTTATGAAATAATA i chlSab2.chr2 C 0 C 0 s canFam3.chr31 13820988 27 + 39895921 GAAAGGTGAACCCTTCATAAAATAATA i canFam3.chr31 C 0 I 378 e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78116694 9034 + 98207768 I e rheMac3.chr3 168557382 304 - 198365852 M e nomLeu3.chr25 4442849 1563 + 32716333 I a score=82746.000000 s hg38.chr21_KI270874v1_alt 68937 52 + 166743 AGATATCGCTATTTGTGGCAATAAAATTTGGATGCTAATAGCGCAAAGGAAG s panTro4.chr21 3681763 52 + 32799110 TGATATAGCTATCTGTGGCAATAAAATTTGGATGCTAATAGCACAAAGGAAG i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16938308 52 + 48394510 CGATATAGCTATTTATGGCAATAAAATTTGGATGCTAATAGCACAAGGGAAG i ponAbe2.chr21 C 0 I 813 s macFas5.chr3 162221963 52 - 192294377 TGATATAGCTATTTGTGGTAATAAAATTTGGATGCTAATAGCACAAAGGAAA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150905591 52 - 180432695 TGATATAGCTATTTGTGGTAATAAAATTTGGATGCTAATAGCACAAaggaaa i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15006559 52 - 90373283 TGATATAGCTATTTGTGGTAATAAAATTTGGATGCTAATAGCACAAAGGAAA i chlSab2.chr2 C 0 C 0 s canFam3.chr31 13821393 52 + 39895921 aAATATTGCTATTTGTGGTTTAAAAAATTTGATACTAATAGCACAAAAGAAA i canFam3.chr31 I 378 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78116694 9034 + 98207768 I e rheMac3.chr3 168557382 304 - 198365852 M e nomLeu3.chr25 4442849 1563 + 32716333 I a score=251335.000000 s hg38.chr21_KI270874v1_alt 68989 155 + 166743 TTTTATAAATGAAATAAGCATGGTCAAAATTAGTCTAACACCTCTGACCACAACTCTTGTTTTTGTTGAAACACAATATAATTAAGC-CAA-TACTGACCTGGAAATTTTATAGCTTGCCATTCATCTTCTCCAAAATAAATTGATTAATGCCTGAA s panTro4.chr21 3681815 155 + 32799110 TTTTATAAATGAAATAAGCATGGTCAAAATTAGTCTAACACCTCCGACCACAACTCTTGTTTTTGTTGAAACACAATATAATTAAGC-CAA-TATTGACCTGGAAATTTTATAGCTTGCCATTCATCTTCTCCAAAATAAATTGATTAATACCTGTA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16939173 155 + 48394510 TTTTATAAGTAAAATAGGCATGGTCAAAATTAGTCTAACACCTCCGACCACAACTCTTGTTTTTGTTGAAACACAATATAATTAAGC-CAA-TATTGACCTGGAAATTTTATAGCTTGCCATTCATCTTCTCCAAAATAAATTGATTAATGCCGGAA i ponAbe2.chr21 I 813 C 0 s macFas5.chr3 162222015 155 - 192294377 TTTTATAAATGAAATAAGCATGGTCAAAATTATTCTAACACCTCTGACCACAACTCTTGTTTGTGTTGAAACACAATATAATTGAGC-CAA-TATTGACCTGGAAATTTTATAGCTTGCCATTCATCTTCTCCAAAATAAATTTATTAATGCCTGTA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150905643 155 - 180432695 ttttataaatgaaataagcaTGGTCAGAATTATTCTAACACCTCTGACCACAACTCTTGTTTGTGTTGAAACACAATATAATTGAGC-CAA-TATTGACCTGGAAATTTTATAGCTTGCCATTCATCTtctccaaaataaatttattaatgcCTGTA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15006611 155 - 90373283 TTTTATAAATGAAATAAGCATGGTCAAAATTATTCTAACACCTCTGACCACAACTCTTGTTTGTGTTGAAACACAATATAATTGAGC-CAA-TATTGACCTGGAAATTTTATAGCTTGCCATTCATCTTCTCCAAAATAAATTTATTAATGCCTGCA i chlSab2.chr2 C 0 C 0 s canFam3.chr31 13821445 154 + 39895921 GTTCATAAATGAAATAAGCACAATTAAAGTTATTCTAACACCTCTGACCATAACTCTTGTTATTG-TAAAAAGCAATGTAATTGAACACAACTCTTGAACTAGAAATGTTATAGCTTGCCATTCATCT--TCCAAAACAAATTATTTAATGGCAGTT i canFam3.chr31 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78116694 9034 + 98207768 I e rheMac3.chr3 168557382 304 - 198365852 M e nomLeu3.chr25 4442849 1563 + 32716333 I a score=1219650.000000 s hg38.chr21_KI270874v1_alt 69144 574 + 166743 CATATGGTGATACGACAGAAGAAAGAAATCTATTATCACTGTAGTTACAATTCAGGTTTATTATTAAAACTGTCTGCATTGGAAAAATATGTATTTTTGGGTAATTGTTTCATGGATTATATCAATGTAGGTAAGGTATTAG-GTTTTTAAAGATTTCGCTTAAACCTTATGCGATTCATTATTGGCAATT-----TAAATTACCTCGATAATCAG-TTTTCAATTACTAAATTAAGATCATTATAACATAGTCCAAAAAATGACAATTTAGTTTTAATAG-----GAAAGAAATAAACTGTCAACTAGGCATGTCTGGAGATATGATCAATTACGTTAAGTGATTTGACCAATATGGCTGCATGGGAAGAACATTTCTGACCCTTTTTGGTCAGGCCAAGTATTTTTTTGTCAATAGTTGTCAGTAGTTGATCTAAACACTTAAGAAAAGTGACATTTTACTCTGAAGATAATCAGCAAAATACAGAACAAATTATGGAGATAAATGTAAGTATATGTGTGCAGGAATACATCCTGAATATACCAAAACAGGGCACATATTTGCCTTTTTATAACTTTTTTTAAA---- s panTro4.chr21 3681970 574 + 32799110 CATATGGTGATACGACAGAAGAAAGAAATCTATTATTACTGTAGTTACAATTCAGGTTTATTATAAAAACCATCTGCATTGGAAAAATATGTATTTTTGGGTAATTGTTTCATGGATTATATCAATATAGGTAAGGTATTAG-GTTTTTAAAGATTTCGCTTAAACCTTATGCGATTCATTATTGGCAATT-----TAAATTACCTCGATAATCAG-TTTTCAATTACTAAATTAAGATCATTACAACATAGTCCAAAAAATGACAATTTAGTTTTAATAG-----GAAAGAAATAAACTGTCAACTAGGCATGTCTGGAGATATAATCAATTACGTTCAGTGATTTGACCAATATGGCTGCATGGGAAGAACATTTCCGACCCTTTTTGGTCAGGCCAAATATTTTTTTGTCAATAGTTGTCAGTAGTTGATATAAACACTTAAGAAAAGTGACATTTTGCTCTGAAGATAATCAGCAAAATACAGAACAAATTATGGAGATAAATGTAAGTATATGTGTGTAGGAATACATCCTGAATATACCAAAACAGGGCACATATTTGCCTTTTTATAACTTTTTTTAAA---- i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16939328 574 + 48394510 CATATGGTGATATGACAGAAGAAAGAAATCTATTATCACTGTAGTTACAATTCAGGTTTATTATAAAAACTGTCTGCATTGGAAATATATGTATTGTTGGGTAATTGTTTCATGGATTATATCAATGTAGGTAAGGTATTAG-GTTTTTAAAGATTTCACTTAAACCTTATGCGATTCATTATTGGCAATT-----TAAATTACCTCGATAATCAG-TTTTCAATTACTAAATCAAGATCATTACAACATAGTCCAAAAAATGACAATTTAGTTTTAATAG-----GAAAGAAATAAACTGTCAACTACGCATGTCTGGAGATATGATCAATTACGTTCAGTGATTTGACCAATATGGCTGCATGGGAAGAATATTTCTGAACCTTTTTGGTCAGGCCAAGTATTTTTTTGTCAATAGTTGTCAGTAGTTGATCTAAACATTTAAGAAAAGTGACGTTTTGCTCTGAAGATAATCAGCAAAATACACAACAAATTATGGAGATAAATGTAAGTATATGTGCATAGGAATACATCCTGAATATACCAAAACAGGGCACATATTTGCCTTTTTATAACTTTTTTTAAA---- i ponAbe2.chr21 C 0 C 0 s rheMac3.chr3 168557698 574 - 198365852 CATATGGTGACATGACAGAAGAAAGAAATCTATTATCACTGTAGTTACAATTCAGGTTTATTATAACAACTGTCTGCATTGGAAAAATGTGTATTGTTGAGTAATTGTTTCATGGATTATATCAATGTAGGTAAGGTATTAG-GTTTTTAAAGATTTCACTTAAACCTTATGCAATTCATTATTGGCAATT-----TAAATTACCTCGATAGTCAG-TTTTCAATCACTAAATTAAGATCATTACAGTGTAGTCCCCAAAATGACAATTTAGTTTTAATAG-----GAAAGAAAAAAACTGTCAGCTAGGCATATTTGGAGATCTGATCAATTACGTTCAGTGATTAGACCACTATGGCTGCATGGGAAGAACATTTCTGACTCTTTTTGGTCAGGCCAAGTATTTTTTTGTCAATAGTTGTCAGTAGTTGATCTAAACCCTTAAGAAAAGTGACATTTTGCTCTGAAGATAATCAGCAAAATACAGAACAAATTATGGAGATAAATGGAAGTATATGTGTGTAGAAATACCACCTGAATATACCAAAACAGGGTATATATTTGCTTTTTTATAACTTTTTTTAAA---- i rheMac3.chr3 M 304 C 0 s macFas5.chr3 162222170 574 - 192294377 CATATGGTGACATGACAGAAGAAAGAAATCTATTATCACTGTAGTTACAATTCAGGTTTATTATAACAACTGTCTGCATTGGAAAAATGTGTATTGTTGAGTAATTGTTTCATGGATTATATCAATGTAGGTAAGGTATTAG-GTTTTTAAAGATTTCACTTAAACCTTATGCAATTCATTATTGGCAATT-----TAAATTACCTCGATAGTCAG-TTTTCAATCACTAAATTAAGATCATTACAGTGTAGTCCCCAAAATGACAATTTAGTTTTAATAG-----GAAAGAAAAAAACTGTCAGCTAGGCATATTTGGAGATCTGATCAATTACGTTCAGTGATTAGACCACTATGGCTGCATGGGAAGAACATTTCTGACTCTTTTTGGTCAGGCCAAGTATTTTTTTGTCAATAGTTGTCAGTAGTTGATCTAAACCCTTAAGAAAAGTGACATTTTGCTCTGAAGATAATCAGCAAAATACAGAACAAATTATGGAGATAAATGGAAGTATATGTGTGTAGAAATACCACCTGAATATACCAAAACAGGGTATATATTTGCTTTTTTATAACTTTTTTTAAA---- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150905798 574 - 180432695 CATATGGTGAcatgacagaagaaagaaacctATTATCACTGTAGTTACAATTCAGGTTTATTATAACAACTGTCTGCATTGGAAAAATGTGTATTGTTGAGTACTTGTTTCATGGATTATATCAATGTAGGTAAGGTATTAG-GTTTTTAAAGATTTCACTTAAACCTTATGCAATTCATTATTGGCAATT-----TAAATTATCTCGATAGTCAG-TTTTCAATCACTAAATTAAGATCATTACAGTGTAGTCCCCAAAATGACAATTTAGTtttaatag-----gaaagaaaaaaactgtcaactaGGCATATCTGGAGATCTGATCAATTACGTTCAGTGATTAGACCACTATGGCTGCATGGGAAGAACATTTCTGACTCTTTTTGGTCAGGCCAAGTAtttttttGTCAATAGTTGTCAGTAGTTGATCTAAACCCTTAAGAAAAGTGACATTTTGCTCTGAAGATAATCAGCAAAATACAGAACAAATTATGGAGATAAATGGAAGTATATGTGTGTAGAAATACCTCCTGAATATACCAAAACAGggcatatatttgcttttttataactttttttaaa---- i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15006766 574 - 90373283 CATATGGTGACATGACAGAAGAAAGAAATCTATTATCACTCTAGTTACAATTCAGGTTTATTATAACAACTGTCTGCATTGGAAAAATGTGTGTTGTTGAGTAATTGTTTCATGGATTATATCAATGTAGGTAAGGTATTAG-GTGTTTAAAGATTTTGCTTAAACCTTATGCAATTCATTATTGGCAATT-----TAAATTACCTCGATAGTCAG-TTTTCAATCACTAAATTAAGATCATTACAGTGTAGTCCCAAAAATGACAATTTAGTTTTAATAG-----GAAAGAAAAAAACTGTCAACTAGGCATGTCTGGAGATCTGATCAATTACATTCAGTGATTTGACCAATATGGCTGCATGGGAAGAAGATTTCTGACTCTTTTTGATCAGGCCAAGTATTTTTTTATCAATAGTTGTCAGTAGTTGATCTAAACCCTTAAGAAAAGTGACATTTTGCTCTGAAGATAATCAGCAAAATACAGAACAAATTATGGAGATAAATGTAAGTATATGTGTGTAGGAATACCTCCTGAATATACCAAAACAGGGCATATATTTGCTTTTTTATAACTTTTTTTAAA---- i chlSab2.chr2 C 0 C 0 s canFam3.chr31 13821599 563 + 39895921 TATATGGAGATACGACAGATAAAAGAAATCTATTATCACTGCAGTTATAATTTACATTTATTATAAAGACAATATAGA-CAAAATAATGGGTATGGTTCAGTAGTTG----ATTGACTATACTAATGCAGGTAAAATATTAGTTTTTTTTAAGATTTCACTTAAACCTCATGTCATTCACTAAAGGCAATTTTACCTAAATTATTTCATTAATCAGTTTTTCAATGATTAAATTAAGGTCAATACAACAAAGTGCC-AAAATAACAATTAAGTTCTACTAGTATTAAAGAAAAAAAAAGTGTCAACTAGGTGTGTTTGGAGAAATGATCAATCATTTTCAGTGATTTTGTT-------------------AACATTCCTGACCCTTTTTGATTGATCCAAGTATTGTTTTGTCAATAGCTACCAATAGTTGCCTCAAACAC--AGGGAGAGTGCTACTTTGATCTGAAAATCATCAGCAAAATATGTGACTAATTATGGAGACAAATATAAGTCTATGTGAGTAGGAATACATCCTGATAATACCAGAATAGTGCACAGATATGCCTTTTTATAACCTTTTTTTTTTATT i canFam3.chr31 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=1026014.000000 s hg38.chr21_KI270874v1_alt 69718 560 + 166743 AAAAGGAAAGTTGGGGATTaagatggcagataggaggcaggactagcttgcagcttccgcttggacagac--agagcagcatgtggagattcacatcatgaactt---ctccaaaaactacggcaggagcataaccaggaaagccaagagaatccacagaccctttgaaggaactgaatcaccaatgcaggctccctgagatgctgaaaaactgtgagtccacttgctttctcaatggggaggctcgtggtctggggcaagttcttagtcctggtctccggctgcctgaaaatcgattcggtgctgtttggggaacacagtgaaagtgagaccagtctttaggactgcaggctgtgtgagagcagggtgaggcctgtgactgccggctttt-ccccactttcctggcaacctgtataactcagcagaggcagccataatccctccaggaatataactccactggactgggaatcacactcccatcccccacagcagccacagcaagcctcacccaaggagaggctgagttcagacacccctaaccctgcccccacctggtggtctt s panTro4.chr21 3682544 561 + 32799110 AAAAGAAAAGTTGGGGATTaagatggcagataggaggcaggactagcttgcagcttccgcttggacagac--agagcagcatgtggagattcacatcatgaactt---ctccaaaaactactgcaggagcataaccaggaaagccaagagaatccacagaccctttgaaggaactgaatcaccactgcaggctccctgagatgctgaaaaactgtgagtccacttgctttctcaatggggaggctcatggtctggggcaagttcttagtcctggtctccgactgcctgaaaatcgattcggtgccgtttggggaacacagtgaaagtgagaccagtctttaggactgcaggctgtgtgagagcagggtgaggcctgtgactgccggcttttcccccactttcctggcaacctgtataactcagcagaggcagccataatccctccaggaatataactccactggactgggaatcacacctccatcccccacagcagccacagcaagcctcacccaaggagaggctgagttcagacatccctaaccctgcccccacctggtggtctt i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16939902 560 + 48394510 AAAAGAAAAGTTGGGGATTaagatggcagataggaggcaggactagcttgcagcttccgcttggacagac--agagcagcatgtggagattcacatcatgaactt---ctccaaaaactactgcaggagcataaccaggaaagccgagagaatccacagaccctttgaaggaactgaataaccactgcagtctccctgagatgctgaaaaactgtgagtccacttgctttctcaatggggaggctcatggtctggggcaagttctcagtcttggtctccagctgcctgaaaatagattcggtgctgtttggggaacacagtgaaagtgagaccagtctttaggattgcaggctgtgtgagagcagggtgaggcctgtgactgacggctttt-ccccactttcctggcaacctgtataactcagcagaagcagccataatccctcaaggaatataactccattggactgggaatcacacccccattccccacagcagccacagcaagcctcacccaaggagacgctgagttcagacatacctaaacttgcccccacctggtggtctt i ponAbe2.chr21 C 0 C 0 s rheMac3.chr3 168558272 564 - 198365852 ACAAGAAAAGTTGGGGATTaagatggcagataggaggcaggactagctt-caccttccacttggacagacagagagcagcatgtggagattcacatcatgaacttctgctccaaaaactactgccagagcataaccaggaaagccgagagaatccacagaccctttgaaggaactgaatcaccactgctggctcccagagatgctgaaaaaccgtgagtccggttgctttcttaatggggaggctcatggtctggggcaagttctcagtcctggtctccagctgcctgaaaatcgattcggtgctgtttggggaacacagtggaagcgagaccagtctttaggactgcaggttgtgtgagagcagggtgaggcctgtgactgctggctttt-ccccactttcctggcaacctgtataacttggcagaggcagccataatccctccaggaatataactctattggactgggaaccacacccccatcccccacagcagccacagcaagcctcacccaaagagaggctgagttcagacatccctaaccctgcccccacctggtggtctt i rheMac3.chr3 C 0 I 5499 s macFas5.chr3 162222744 564 - 192294377 ACAAGAAAAGTTGGGGATTaagatggcagataggaggcaggactagctt-caccttccacttggacagacagagagcagcatgtggagattcacatcatgaacttctgctccaaaaactactgccagagcataaccaggaaagccgagagaatccacagaccctttgaaggaactgaatcaccactgctggctcccagagatgctgaaaaaccgtgagtccagttgctttcttaatggggaggctcatggtctggggcaagttctcagtcctggtctccagctgcctgaaaatcgattcggtgctgtttggggaacacagtggaagcgagaccagtctttaggactgcaggttgtgtgagagcagggtgaggcctgtgactgctggctttt-ccccactttcctggcaacctgtataacttggcagaggcagccataatccctccaggaatataactctattggactgggaatcacacccccatcccccacagcagccacagcaagcctcacccaaagagaggctgagttcagacatccctaaccctgcccccacctggtggtctt i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150906372 564 - 180432695 acaagaaaagttgGGGATTaagatggcagataggaggcaggactagctt-cACCTTCCACTTGGACAGACagagagcagcatgtggagattCACACCATGAACTTCTGCTCCAAAAACTACTGCCAGAGCATAACCAGGAAAGccgagagaatccacagaccctttgaaggaactgAATCACCACTGCTGGCTCCCAGAGATGCTGAAAAACCGTGAGTCCACTTGCTTTCTTAATGGGGAGGCTCAtggtctggggcaagttctcagtcCTGGTCTCCAGCTGCCTGAAAATCGCTTCGGTGCTGTTTGGGGAACACAGTGGAAGCGAGACCAGTCTTTAGGACTGCAGGTTGTGTGAGAgcagggtgaggcctgtgactgctggctttt-ccCCACTTTCCTGGCAACCTGTAtaactcagcagaggcagccataatccctcCAGGAATATAACTCTATTGGACTGGGAAtcacacccccatcccccacagcagccacagcaagcctcACCCAAAGAGAGGCTGAGTTCAGACATccctaaccctgcccccacctggtggtctt i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15007340 553 - 90373283 ACAAGAAAAGTTGGGGATTaagatggcagataggaggcaggactagctt-caccttccgcttg----gacagagagcagcatgtggagattcacatcatgaacttctgctccaaaaactactgccagagcataaccaggaa-------agaatccacagaccctttgaaggaactgaatcaccactgctggctcccagaaatgctgaaaaaccatgagtccacttgctttcttaatggggaggctcatggtctggggcaagttctcaatcctggtctccagctgcctgaaaatcaattcggtgctgtttggggaacacagtggaagcgagaccagtctttaggactgcaggttgtatgagagcagggtgaggcctgtgactgctggctttt-ccccactttcctggcaacctgtataacttggcagaggcagccataatccctccaggaatataactccattggactgggaatcacacccccatcccccacagcagccacagcaagcctcacccaaagagaggctgagttcagacatccctaaccctgctcccacctggtggtctt i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13822162 0 + 39895921 C e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=1164218.000000 s hg38.chr21_KI270874v1_alt 70278 947 + 166743 tctctacctaccctggtagccaaagacaaaggtcataatctttcggaagctctatagccctgtccactgcctgagagacctgaatacttaaccaggggtccctagagcaactttgcgtcctccctatagg---------gaggcagttttgaaagtgccacctcctggctggaggccaaccaacacaacaccagtgcactaaac-aaaaatacaaccaagggccctcacagaattcacttcactcccttgcta---cctccactggggaaggtgtggatatcatggctgcaagacctgaagatggatcacatcacaggactcttcacagacactccccagtaccagcccggagcctgggagctctgctgggtggctagacacagaatatcaaaaacagtcactaaagttaggctctcaggaagccccatgtctaggggaagggggataacactacatcaagagagcaccctgtgatagaaaagaacctgagcagcagcccttgaattccagatattccctctgacatagtctacccaagtgacaaggaaccagaaaaacaattttagtaatatgacaaaacaagatttgttaacacctgcaaaagatcatatcagctcaccagcaatgaacccaaaccaagatgaaatctctgaattgccagaaaaagaattcagaaggtcaattattaagctaatcaaggaggcaccagaaaaaggtgaaatccaacttaaagaaatcaaaaacatgatgcaggattagaaagcaaatttcttcagtgaaatagatagcataaat-aaaaaacaattacaacttctggaaatcaaggacac----agagaaatacaaaatgcactggaaagtctcagcaatagaatcaaacaagcagaagaaagatcttcagagctcaaagaaaagtctttcaaattaacctaatccaacagagacaaagaaaaaagagtttt--t s panTro4.chr21 3683105 949 + 32799110 tctctacctaccctggtagccaaagacaaaggtcgtaatcttttggaagctctatagccctgtccactgcctgagagacctgaatacttaaccaggggtccctagggcaagtttgcatcctccctatagg---------gaggcacttttgaaagtgccacctcctggctggaggccaaccaacacaacaccagtgcactaaac-aaaaacacaaccaagggccctcacagagttcacttcactcccctgcta---cctccactggggaaggtgtggatatcatggctgcaagacctgaagatggatcacatcacaggactcttcacagacactccccagtaccagcccggagcctgggagctctgctgggtggctacacacagaatatcaaaaacagtcactaaagttaggctctcaggaagccccatgtctaggggaagggggataacactacatcaagaaagcaccttctgatagaaaagaacctgagcagcag-ccttgaattccagatattccctctgacatagtctacccaaatgacaaggaaccagaaaaacaattttagtaatatgacaaaataagatttgttaacacctgcaaaagatcatatcagctcaccagcaatgaacccaaaccaagatgaaatctctgaattgccagaaaaagaattcagaaggtcgcttattaagctaatcaaggaggcaccagaaaaaggtgaaatccaacttaaagaaatcaaaaacatgatgcaggattagaaagaaaatttcttcagtgaaatagatagcataaat-aaaaaacaattacaacttctggaaatcaaggacacacttagagaaatacaaaatgcgctggaaagtctcagcaatagaatcaaacaagcagaagaaagatcttcagagctcaaagaaaagtctttcaaattaacctaatccaacaaagacaaagaaaaaagag-ttt--t i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16940462 941 + 48394510 tctctacctaccctggtagacaaagacaaaggtcataatcttttggaagctctatggccctgtccactgcctgagagaactgaatacttaaccaggggtccctagggcaagtttgcatcctccctatagg---------gaggcatttttgaaagtgccacctcctggctggaggccaaccaacacaacaccagtgcactaaac-aaaaacacaaccaagggccctcacagagttcacatcactcccctgcta---cctccactggggaaggtgtggatatcatggctgcaagacctgaagatggatcacatcacaggactcttcacggacactccccagtaccagcccagagcctggtagctctgctgggtggctagacacagaatgtcaaaaacaatcactaaagttaggctctcaggaagccccatgtctaggggaagggggataacactacatcaagagagcaccctgtgatagaaaagaatct--atcacagcccttgaattccagatattccctctgacatagtctacccaaatgacaaggaaccagaaaaacaattttagtaataagacaaa--cagatttgttaacaccggcaaaaaatcatatcagcttaccaacaatgaacccaaaccaagatgaaatctctgaattgccagaaaaagaattcagaagggcgattattaagctaatcaaagaggcaccagaaaaaggtgaaatccaacttaaagaaatcaaaaacatgatgcaggattagaaagaaaatttcttcagtgaa----atagcataaat-aaaaaa-aatgacaacttctggaaatcaaggacacacttagagaaatacaaaatgcactggaaagtcccagcaatagaatcagtcaagcagaagaaagatcttcagagctcaaagaaaagtctttcaaattaacctaatccaacaaagacaaagaaaaaagag-ttt--t i ponAbe2.chr21 C 0 C 0 s macFas5.chr3 162223308 949 - 192294377 tctctacctaccctggtagccaaagacaaaggtcacaatctttcggaagctctatggccctgtccactgcctgagagacctgaagacttaacca-ggatgcctagggcaagtttgtgtcctctctataggaccatagctgacgcacttttgaaagcaccacctcctggctggaggccaaccaacacaacaccagtgcactaaac-aaaaacataaccaaggacccacacggagttcacttcactcccctgcta---cctccactggggaagatgtggatatcatggctgcaagacctgaagacggatcacatcacaggactcttcacagacactccccaataccagcccggagcctggtacctctgctgggtggcaggacgcagaatatcaaaaacaatcactgaagttaggcactcaggaagccccatgtctaggggaaggtggataacaccgcatcaagggagcaccctgtgatagaaaagaatctcagcagcagcccttgaattccagatattccctctgacatagtctacccaagtgacagggaacaagaaaagcaatttttgc---------aagcaagatttgttaacccctgcaaaagatcataccagctcaccagcaatgaatccaaaccaagatgaaatatctgaattgtcagaaaaagaattcagaaggtcgattattaagctaatcaaggagccaccagagaaaggtgaaatccaacttaaagaaatcaaaaacatgatgcaggattagaaagaaaaaatcctcagtgaaatagatagcataaat-aaaaaacaattacaacttctggaaatcaaggacacgcttagagaaatacaaaatgcattgggaagtctcagcaatagaatcaaacaagcagaagaaagaacttcagagctcaaagaaag-gttttcaaattaacctaatccaacaaagacaaagaagaaagag-tgtaa- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150906936 959 - 180432695 tctctacctaccctggtagccaaagacaaaggtcATAATCTTTCGGAAGCTCTATGGCCCTGTCCACTGcctgagagacctgaagacttAACCA-GGATGCCTAGGGCAAGTTTGTGTCCTCTCTATAGGACCACAGCTGACGCATttttgaaagcaccacctcctggctggaggccaaccaac---acaccagtgcactaaac-aaaaacacaaccaaggacCCACACGGAGttcacttcactcccctgctacctcctcCACTGGGGAAGATGTGGATATCATGGCTgcaagacctgaagatggatcacatcacaggactcttcaCAGACACTCCCCAATACCAGCCCGGAGCTTGGTAcctctgctgggtggctagacgcAGAATATCAAAAACAATCACTGAAGTtaggctctcaggaagccccatgtCTACGGGAAGGTGGAtaacaccacatcaagggagcaccctgtgATAGAAAAGAATCTCAGCAGCAGCCCTTGAATTCCAGAtattccctctgacatagtctacccaagtgacaaggaaccagaaaagcaatTTTAGTAACATGACAAAACAAGATTTGTTAACCCCTGCAAAAGATCATACCAActcaccagcaatgaatccaaaccaagatgaaatatctgaattgccagaaaaagaattcagaaggtcgattattaagctaatcaaggagccaccagagaaaggtgaaatccaacttaaagaaatcaaaaacatgatgcaggattagaaagaaaaattcctcagtgaaatagatagcataaataaaaaaacaattacaacttctggaaatcaaggacacacttagagaaatacaaaatgcactgggaagtctcagcaatagaatcaaacaagcagaagaaagaacttcagagctcaaagaaaaCGTTTTCAAATTAACctaatccaacaaagacaaagaaaaacgag-tgt-a- i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15007893 943 - 90373283 tctctacctaccctggtagccaaaaacaaaggtcataatctttcggaagctctgtggccctgtccactgcctgagagacctgaagacttaacca-ggatgcctagggcaagtttgtgtcctctctataggaccacagctgatgcacttttgaaagcaccacctcctggctggaggccaaccaac---ataccagtgcactaaacaaaaaacacaaccaaggacccacacggagttcacttca---------------ctccactggggaagatgtggatatcatggctgcaagacctgaagatggatcacatcacaggactcttcacagacactccccaataccagcctggagcttggtacctctgctaggtggctagacgcagaatatcaaaaacaatcactgaagttaggctctcaggaagccccatgtctaggggaaggcagataacaccacatcaagggagcaccctgtgatagaaaagaatctcagcagtagcccttgaattccagatattccctctgacatagtctacccaagtgacaaggaaccagaaaagcaattttagtaacatgacaaaacaagatttgttaacccctgcaaaagatcataccagctcaccagcaatgaatccaaaccaagatgaaatatctgaattgccagaaaaagaattcagaaggtcgattattaagctaatcaaggagccaccagagaaaggtgaaatccaacttaaagaaatcaaaaacatgatgcaggattagaaagaaaaattcctcagtgaaatagatagcataaat-aaaaaacaattacaacttctggaaatcaaggacacacttagagaaatacaaaatgcactgggaagtctcagcaatagaatcaaacaagcagaagaaagaacttcagagctcaaagaaaaggttttcaaattaacctaatccaacaaagacaaagaaaaaagag-tgt--- i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13822162 0 + 39895921 C e mm10.chr16 78116694 9034 + 98207768 I e rheMac3.chr3 168558836 5499 - 198365852 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=2026290.000000 s hg38.chr21_KI270874v1_alt 71225 1150 + 166743 aa--aaaaaatgaagaagaactccaagaagttcggaactatgtgaaacatccaaccctaagaataattggtgttcctagggaagaagagaatctaaaagtttgcaaaacatatttgagggaataatctaggaaatattccctgcccttgctagtgatctagacatccaataaaagtagctcaaagaacaccttggaaatttatcac-aaaaagattgacacctaggcacatagtcatcaggttatctaaagtcaaaataaaggaaacaatcttaaaagcagtgaggcaaaaggatccagtaacctataaaggaaaacctaccagacaaacagcagatttctcagcagaaaccctataaactagaaa-------------------------------------------------------------ggattggggtcctatttttaggcaccttaaacaaaataattatcagccaagaaatttgtatccagagaaactaagctgcataaatgaaggaaaaatggtcttttccagacaaacaagtgcttagagaattcaccactaccaagctagcactacaaaaactgctaaaaggagctcaaaatcttgaaacaaatcctcaaaatacaccaaaatagaacttccttaaagcataaatctcagaggacctatataaaaacaatacaatgaaaaatggacttaaactacacccttcaacaagtggatttaacagatatttacagaacattctactcaacagctgcagaatatacgttctactcatcagcacatgaaacactttccaagatagaccatgtgataggccacaaaacaagtctcagtaaatttaagaaaattgaaattatatcaagtattctctcagaccacagtggaatataattggaaaccaactccaaagggaaccttcaaaaccatacaaatacatggaaattaaataacctgctcctgagtgatacttgggtcaacaatgaaatcaagacataaatttaaaaattctttgaactgaataataatagtgacacaacctatcaaaacctctgggatacagcaaaa-atggtgctaagagaaa-agttcatagcattaaatgcctacatcgaaacatctaaaagagcacacatagactatcaaaggtcaaacctcatggaactagagaaacaagaacaatccaaacctaaacccagcagaagaaaag s panTro4.chr21 3684054 1150 + 32799110 aa--aaaaaatgaacaagaactccaagaagttcggaactatgtgaaacatccaaccctaagaataattggtgttcctagggaagaagagaatctaaaagtttgcaaaacatatttgagggaataatctaggaaatattccctgcccttgctagtgatctagacatccagtaaaagtagctcaaagaacaccttggaaatttatcac-aaaaagattgacacctaggcacatagtcatcaggttatctaaagtcaaaataaaggaaacaatcttaaaagcagtgaggcaaaaggatccagtaacctataaaggaaaacctaccagacaaacagcagatttctcagcagaaaccctataaactagaaa-------------------------------------------------------------ggattggggtcctatttttaggcaccttaaacaaaataattatcagccaagaaatttgtatccagagaaactaagcttcataaatgaagtaaaaatggtcttttccagacaaacaagtgcttagagaattcaccactaccaagctagcactacaaaaactgctaaaaggagctcaaaatcttgaaacaaatcctcaaaatacaccaaaatagaacttccttaaagcataaatctcagaggacctatataaaaacaatacaatgaaaaatggacttaaaccacacccttcaacaagtagatttaacagatatttacagaacattctactcaacagctgcagaatacacattctactcatcagcacatgaaacactttccaagatagaccatgtgataggccacaaaacaagtctcagtaaatttaagaaaattgaaattatatcaagtattctctcagaccacagtggaatataattggaaaccaactccaaagggaaccttcaaaaccatacaaatacatggaaattaaataacctgctcctgagtgatacttgggtcaacaatgaaatcaagacataaatttaaaaattatttgaactgaataataatagtgacacaacctatcaaaaccccagggatacagcaaaa-gtggtgctaagagaaa-agttcatagcattaaatgcctacatcaaaatgtctaaaagagcacacatagactatcaaaggtcaaacctcatggaactagagaaacaagaacaatccaaacctaaacccagcagaagaaaag i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16941403 1153 + 48394510 aaagaaaaaatgaacaaagactccaagaagttcggaactatgtaaaacatccaaccctaagaataactggtgttcctaggaaagaagagaatctaaaagtttgcaaaacatatttgagggaataatctaggaaatattccctgcccttgctggtgatctagacatccaataaaagtaactcaaagaacaccttggaaatttatcac-aaaaagattaacacctaggcacatagtcatcaggttatctaaagtcaaaataaaggaaacaatcttaaaagcagtgaggtaaaaggatccagtaatctataaaggaaaacctatcagacaaacagcagatttctcagcacaaaccctatgaactagaaa-------------------------------------------------------------ggattggggtcctatttgtaggcaccttaaacaaaataattatcagccaagaaatttgtatccagagaaactaagcttcataaatgaaggaaaaatagtcttttccagacaaacaagtgcttagagaattcaccactaccaagctagcactacaaaagctgctaaaaggagctccaaatcttgaaacaaatcctcaaaatacaccaaaatagaacctccttaaagcataaatctcagaggacctatacaaaaacagtacaatgaaaaatagacttaaactacactcttcaacaagtggatttaacagatatttacagaacattctactcaacagctgcagaatatacattctactcatcagcacatgaaacactttccaagatagaccatgtgataggccacaaaacaagtctcagtaattttaagaaaattgaaattatatcaagtattctctcagaccgcagtggaataaaattggaaaccaactccaaagggaaccttcaaaaacacacaaatacatggaaattaaataacctgctcctgagtgatactagggtcaacaatgaaatcaagacataaatttaaaaattctttgaactgaataataatagtgacacaacctatcaaaacttcaaggatacagcaaaatatggtgctaagagaaa-agttcatagcattaaatgcctacatcaaaatgtctaaaagagcacacatagactatcaaaggtcatacctcatggaactagagaaacaagaacaatccaaacctaaacccagcagaagaaaag i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4444412 1149 + 32716333 aa--aaaaaaaaaaaaaagactccaagaagttcggaactatgtgaaacatccaaccctaagaataattggtgttcctagggaagaagagaatctaaaagtttgcaaaacatatttgagggaataacctaggaaatattccctgcccttgctagtgatctagacatccaataaaagtagctcaaaaaacaccttgg-aatttatcac-aaaaagatgaacacctaggtgcacagtcatcaggttatctaaagtcaaaataaaggaaacaatcttaaaagcagtgaggcaaaaggatccagtaacctataaaggaaaacctatcagacaaacagcagatttctctgcagaaaccctataaactagaaa-------------------------------------------------------------ggattggggtcctatttttaggcaccttaaac-aaataatcatcagccaagaaatttgtatccagagaaactaagctttataaatgaaggaaaaatagtcttttccagacaaacaagtgcttagagaattcaccactaccaagctagcactacaaaaactgctaaaaggagctcaaaatcttgaaacaaatcctcaaaatacaccaaaatagaacctccttaaagcataaatctcagaggacctatataaaaacaatacaacgaaaaatggacttaaactacacccttcaacaagtggatttaacagatatttacagaacattctactcaacagctacagaatatatattctactcgtcagcacatgaaacattttccaagatagaccatgtgataggccacaaaacaagtctcagtaaatttaagaaaattgaaattatatcaagtattctctcagaccacagtggaataaaattggaaaccaactccaaagggaaccttcaaaaccatacaaatacatggaaattaaataacctgctcctgagtgatacttgggtcaacaatgaaatcaagacataaatttaaaaattctttgaactgaataataatagtgacaaaacctatcaaaacctcagggatacagcaaaa-gtggtgctaagaggaatagttcatagtattaaatgcctacatcaaaatgtctaaaagagcacacatagactatcaaaggtcatacctcatggaactagagaaacaagaacaatccaaacctaaacccagcagaagaaaag i nomLeu3.chr25 I 1563 C 0 s macFas5.chr3 162224257 1143 - 192294377 aa--aaaaaatgaacaaagactccaagaagtttagaactatgtaaaacatccaaccctaagaataattggtgttcctaaggaagaagataatctaaaaatttgcaaaacatatttgagggaataatataggaaatattccctggccgtgctagtgatctatccatccaataaaagtagctcaaagaatacctgggaaatttatcacaaaaaagatttacacctaagcacacagtcgtcaggttatctaaagtcaaaataaaggaaacaatcttaaaagcagtgaagcaaaagaatccagtgacctatgaaggaaaacctatcagacaaacaccagatttctcagcagaaaccctataaactagaaa-------------------------------------------------------------ggattagggtcctatttttaggcaccttaagcaaaataactatcagccaagaaatttgcatccagagaaagtaaacttcataaatgaaggaaaaatagtcttttccagacaaacaaacgcttagagaattcaccactaccaagctagcactacaaaaactgctaaaa-gagctcaaaatcttgaaacaaatccttgaaatacaccaaaatagaacctccttaaagcataaatctcagaggacctatataaaaacaatacaccgaaaaatggacttaaactacacccctcaacaagtgga-ttaacagatatttacagaacattctactcaacagctacagaatatacattatattcatcagcacatgaaacattctctaagatagaccatgtgataggccacaaaacaagtctcagcaaatttaagaaaattgaaattatatcaagtattctctcagaccacagtggaataaaattggaaaccaactctaaagggaaccctcaaaaccatacgaatacatggaaattaaataacctgctcctgagtgatacttgggtcaataatgagatcaagacataaatttaaaaattctttgaactgaataataatagtgacacaacctgtcaaaacctcagggatacagcaaaa-gcggtgctaagagaaa-agttcatagcattaaatgcctacatcaaaatgtctaaaagagcacacatagactatcaaaggtcacacctcatggaactagagaaacaagaac------aacccaaacccagcagaagaaaag i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150907895 1137 - 180432695 aa--aaaaaatgaacaaagactccaagaagtTTAGAACTATGTAAAACATCCAaccctaagaataattggtgttcctaaGGAAGAAGATAATCTAAAAATTTgcaaaacatatttgagggaataatatAGGAAATATTCCCTGGCCGTGCTAGTGATCTAGACATCCAATAAAAGTAGCTCAAAGAATACCTGGGAAATTTATCACAAAAAAGATTTACACCTAAGCAcacagtcatcaggttatctaaagtcaaaataaaggaaacaatctTAAAAGCAGTGAAGCAAAAGGATCCAGTAACCTatgaaggaaaacctatcagacaAACaccagatttctcagcagaaaccctataaacTAGAAA-------------------------------------------------------------GGATTAGGGTCCTATTTTTAGGAACCTTAAGCAAAATAACTATCAGCCAAGAAATTTGCATCCAGAGAAAGtaaacttcataaatgaaggagaaatagtcttttccagacaaacaaacgcttagagaattcaccactaccaagctaGCACTACaaaaactgctaaaaggagctcaaaatcttgaaacaaatccttgaaatacaccaaaatagaacctccttaaagcataaatctcagaGGACCTATATAAAAACAATACACTGAAAAATGGACTTAAACTACACCCCTGAACAATTGga-ttaacagatatttacagaacattctactcaacagctacagaatatacattatattcatcagcacatgaaacattctccaagatggACCAtgtgataggccacaaaacaagtctcagcaaatttaagaaaattgaaattatatcaagtattctctcagaccacagtggaataagaTTGGAAACCAACTCTAAagggaaccctcaaaaccatatgaatacatggaaattaaataacctggtCCTGAGTGATacttgggtcaacaatgaaatcaagacataaatttaaaaattctttgaactgaataataatagtgacacaacctatcaaaacctcagGGATACAGCAAAA-GCGGTGCTAAGAG-AC-AGTTCATAGCACTAAATCCCTACATCAAAATGTCTAAAAGAGCACACATAGACTATCAAAGGTCACACCTCATGGAACTAAAGA------Aac------aacccaaacccagcagaagaaaag i papAnu2.chr3 C 0 I 334 s chlSab2.chr2 15008836 1198 - 90373283 aa--aaaaaatgaacaaagattccaagaactttagaactatgtaaaacatccaaccctaagaataattggttttcctaaggaagaagataatctaaaaatttgcaaaacatatttgagggactaatataggaaatattccctggccgtgctagtgatctagacattcaataaaagtatctcaaagaatacctgggaaatttatcacaaaaaagatttacacctaagcacacagtcatcaggttatctaaagtcaaaataaaggaaacaatcttaaaagcagtgaagcaaaaggatccagtaacctatgaaagaaaacctatcagacaaacaccagatttctcagcagaaaccctgtaaactagaaaggattagggtcctatttttaggcaccttaagcaaaataactatcagccaagaaatttgcagggattagggtcctatttttaggcaccttaagcaaaataactatcagccaagaaatttgcatccagagaaagtaaacttcataaatgaaggagaaatagtcttttccagacaaacaaacgctcagagaattcaccactaccaagctagcactacaaaaactgctaaaaggagctcaaaatcttgaaacaaatccttgaaatacaccaaaatagaacctccttaaagcataaatctcagaggacctatataaaaacaatacactgaaaaatggacttaaactacacccctgaacaattgga-ttaacagatatttacagaacattctactcaacagctacagaatatacattatattcatcagcacatgaaacattctccaagatggaccatgtgataggccacaaaacaagtctcagcaaatttaagaaaattgaaattatatcaagtattctctcagaccacagtggaataaaattggaaaccaactctaaagggaaccctcaaaaccatacgaatacatggaaattaaacaacctcctcctgagtgatacttgggtcaacaatgaaatcaagacataaatttaaaaattctttgaactaaataataatagtgacacaacctatcaaaacctcagggatacagcaaaa-gcggtgctaagag-ac-agttcatagcactaaatgcctacatcaaaatgtctaaaagagcacacatacactatcaaaggtcacaccttatggaactaaaga------aac------aacccaaacccagcagaagaaaag i chlSab2.chr2 C 0 I 338 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13822162 0 + 39895921 C e mm10.chr16 78116694 9034 + 98207768 I e rheMac3.chr3 168558836 5499 - 198365852 I a score=4718561.000000 s hg38.chr21_KI270874v1_alt 72375 2675 + 166743 aaataacaaagaccagtgcagagctaaatgaaattgaaac-caaaaaaatacaaaagatatatgaaacaaaaagctggttctttgaaaagaaaagcactattgatagaccattagcaagattaaccaagaaaagaagagagaagatccaaataagctcaattagaaacaaaaaaggagatattacaaatggtaacaaagtaatacaaaagattattcaaggctactatgaacacctttatgtgcacaaactagaaaacctagaggagatggataaattcctggaaacatacaaccctcctaaattaaaccagaaagatacagaatctctgaacagaccagtaaaaagcagtgagattgaaatggtaaccaaaa-aaatgccaacaacaaaa-----aaaatagtaccagatggattcacagctgaattctatc-aacattcaaagaagaattggtaccaatcctatggaaaccatttcaaaagataaagaaagagggaatcctccctaaatcattctatgaagccagtatcaccttaataccaaaaccagaaaagaacataacaaaaaaagaagactacagaccaatatccctgatgaatatagaggtaaaaatcctcaacaaaatactagtgaaacaaatccaacagcatatcaaaaagataattcaccatgatcaagtgggtttcaaca--gggatgcaaggatagtttaacatctgcaaggcaataaatgtgatacactacataaacagaattaaaaacaaaaattacataatcatctcaatagatgcaggaaagcatttgacaaaatccaacaccacttttgattaaagccctcagcaaaattggcatacatgggacacaccttaaggtaataaaagctagtaatatctatgacaaactcacagccaatgttatattgaatggggaaaagttgaaagcattttctgtgagaactggaacaagacaagggtgcccactttcaccacttctatt-aacata--ctattggaagtcctagccagaacaatcagacaaagagaaagaaataaagggcatccaaatcagtaaagatgaagtcaaactgttgctgtttgcagatgatatgatcatatacctagaaaaccctaaagactcatgcaaaaagctcctagtactgaataatgaattcagcaaagtttcaggatacaaaatcaaggtacacaaatcagtaggtctgctacaccaacagcgacaagatgagaatcaaatcaagaactcaacccctttcacaacagctgcaaaaa-atatatatatatttaggaatatacctaaccaaggaggtgaaagaccactacaaggaaaactacaaaatactgctgaaagaaatcatagatgacataaacaaatggaaacatatcccatgctcatggatgggtagaatcaatattgtgaaaatgaccatactgccaaaatcaatctagaaattcagcgcaattcccatcaaaataccaccatcattcttcacagaactaggaaaaacaattctagaagtcatatggaaccaaaaaagagcccatatatccaaagcaagactaagcaaaaagaacaaatctgtaggcatcacattacctgacttcaggcaatactataagaccatagtcaccaaaatagcatggtactggtataaaaataggcacacagaccaacggaaaagaatagaaaacccagaaataaacccaaatacttagcgccaactgatcttcaacaaagcaaacaaaaacttaaagtggggaaaggacaacctattcaacaaatggtgttgggataatcggcaagccacatgtagaagattgaaactggatcctcatctctcaccttatacaaaaatcaattcaaaatggatcaaacacttaaatctaagacctgaaaccataaagattctagaagataacattggaagaacccctctatacattgtcttaggcaaagacttcatgacttagaatccaaaagcagatgcaacaaaaataaagataaataaataggacttaaactaaaaagcttctgcacagcaaaagaaataatcagcagagttaacagaaaacccacagagtgagagaaaaccttcgcaatctatacatccaacaaaggactaatatccggaatctacaaagaactgaaacaaatcagcaagataaaaagaagcaatcccatcaaaaagtgggctaaggacatgaatagacaattgtcaaaacaagatatacaaatggccaacaaacacatggaaaaatgctcaacatcactaatgatcagggagatgcaaatcaaaactgcagtgtaataccacctcactcctacaagaatggccataatcaaaatagatgctggcacagatatagctaaaacggaacacttttacattgttggtgggaatgtaaactagtacaaccactatgggaaacagtgtggaaattctttaaagaactaaaagtagatctactgtttgatccagcaattccactactaggtatctagccagaggaaaagaagtcattatac--aaaaaaagatacttgcacacacat-----------------------atttatagcagcacattttgaaatggc-aaaaaatatgaaaatagcccaaatgcccatcaatcaatgagtagataaaaaaaa--ttgtgtgtgtgtgtgtgtatatatacatatatatat-------------------------------aaagaa s panTro4.chr21 3685204 2666 + 32799110 aaataacaaagaccagtgcagagctaaatgaaattgaaacaaaaaaaaatacaaaagatatatgaaacaaaaagctggttctttgaaaagaaaagcaatattgatagaccattagcaagattaaccaagaaaagaagagagaagatccaaataagctcaattagaaacaaaaaaggagatattacaaatggtaacaaagaaatacaaaagattattcaaggctactatgaacagctttatgtgcacaaactagaaaacctagaggagatggataaattcctggaaacatacaaccctcctaaattaaaccagaaagatatagaatctctgaacagaccagtaaaaagcagtgagattgaaatggtaacaaaaa-aaatgccaacaacaaca-----aaaa-attacc-gatggatccacagctgaattctatc-aacattcaaagaagaattggtaccaatcttatggaaaccatttcaaaagataaagaaagagggaatcctccctaaatcattctatgaagccagtatcaccttaa-accaaaaccagaaaagaacataacaaaaaaagaagactacagaccaatatccctgatgaatatagaggtaaaaatcctcaacaaaatactagtgaaacaaatccaacagcatatcaaaaagataattcaccatgatcaagtgggtttcaaca--gggatgcaacgatagtttgccatctgcaaggcaataaatgtgatacactacataaacagaattaaaaacaaaaatcacataatcatctcaatagatgcaggaaagcacttgacaaaatccaacaccacttttgattaaagccctcagcaaaattggcatacatgggacacaccttaaggtaataaaagctagtaatatctatgacaaactcacagccaatgttatattgaatggggaaaagttgaaagcattttctgtgagaactggaacaagacaaggatgcccactttcaccacttctatt-aacata--ctattggaagtcctagccagaacaatcagacaaagagaaagaaataaagggcatccaaatcagtaaagatgaagtcaaactgttgctgtttgcagatgatatgatcatatacctagaaaaccctaaagactcatgcaaaaagctcctagtactgaataatgaattcagcacagtttcaggatacaaaatcaaggtacacaaatcagtaggtctgttacaccaacagcgacaagatgagaatcaaatcaagaactcaacccctttcacaacagctgccaaag-atatatatatatttaggaatatacctaaccaaggaggtgaaagaccactacaaggaaaactacaaaatactgctgaaagaaatcatagatgacataaacaaatggaaacatatcccatgctcatggatgggtagaatcaatattgtgaaaatgaccatactgccaaaatcaatctagaaattcaacgcaattcccatcaaaataccaccatcattcttcacagaactaggaaaaacaattctagaagtcatatggaaccaaaaaagagcccatatatccaaagcaagactaagcaaaaagaacaaatctggaggcatcacattacctgacttcagacaatactataagaccatagtcaccaaaatagcatggtactggtataaaaataggcacacagaccaacggaaaagaatagaaatcccagaaataaaaccaaatacttagcgccaactgatcttcaacaaagcaaacaaaaacttaaagtggggaaaggacaacctattcaacaaatggtgttgggataatcggcaagccacatgtagaagattgaaactggatcctcatctctcaccttatacaaaaatcaattcaaaatggatcaaacacttaaatctaagacctgaaaccataaagattctagaagataacattggaagaacccctctatacattgtcttaggcaaagacttcatgacttagaatccaaaagcagatgcaacaaaaacaaagataaataaataggacttaaactaaaaagcttccgcacagcaaaagaaataatcagcagagttaacagataacccacagagtgagagaaaatcttcgcaatctatacatccaacaaaggactaatatccggaatctacaaagaactgaaacaaatcagcaagataaaaagaagcaatcccatcaaaaagtgggctaaggacatgaatagacaattgtcaaaagaagatatacaaatggccaacaaacacatggaaaaatgctcaacatcactaatgatcagggagatgcaaatcaaaactgcagtgtaataccacctcactcctacaagaatggccataatcaaaatagatgctggcacagatgcagctaaaagggaacacttttacactgttggtgggaatgtaaactagtacaaccactatgggaaacagtgtggagattctttaaagaactaaaagtagatctactgtttgatccagcaattccactactaggtatctagccagaggaaaagaagtcattacac--aaaaaaagatacttgcacacacat-----------------------atttatagcagcacattttgaaatggc-aaaaaatatgaaaacagcccaaatgcccatcaatcaatgagtagat-aaaaaaa--ctgtgtgtgtgtgtg------tatacatatatatat-------------------------------aaagaa i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16942556 2693 + 48394510 aaataacaaagaccagtgcagagctaaatgaaattgaaacaaaaaaaaatacaaaagatttatgaaacaaaaagcttattctttgaaaagaaaagcactattgacagaccattagcaagattaaccaagaaaagaagagagaagatccaaataagctcaattagaaacaaaacaggagatattacaaatgataacaaagaaatacaaaagattattcaaggctactatgaacacctttatatgcacaaactagaaaacctagaggagatggataaattcctggaaacatacaaccctcctagattaaaccagaaagatatagaatctctgaacagacaa--aaaaagcagtgagattgaaatggtaacaaaaa-aaatgccaacaacaaaa-----aaaataggaccagatggattcacagctgaattctatcaaacattcaaagaagaattggtaccaatcctatggaaaccatttcaaaagataaagaaagagggaatcctccctaaatcattctatgaagccagtatcaccttaataccaaaaccagaaaagaacataacaaaaa---aagattacagaccaatatccctgatgaatatagaggtaaaaatcctcaacaaaatactagtgaaacaaatccaacagcatatcaaaaagataattcaccatgatcaagtgggtttcaaca--gggatgcaaggatagtttaacatctgcaagccaataaatgtgatacactacataaacagaattaaaaacaaaaatcacataatcatctcaatacatgcaggaaagcatttgacaaaatccaacaccccttttgattaaagccctcagcaaaattggcatacatgggacacaccttaaggtaataaaagctagtaatatctatgacaaactcacagccaatgttatattgaatggggaaaagttgaaagcattttctgtgagaactggaacaagacaaggatgcccactttcaccacttctattgaacata--ctgttggaagtcctagccagaacaat----caaagagaaagaaataaagggcatccaaatcagtaaagatgaagtcaaactgttgctgtttgcagatgatatcatcatatacctagaaaaccctaaagactcatgcaaaaagctcctagtactgaaaaatgaattcagcaaagtttcaggatacagaatcaaggtacacaaatcagtaggtctgctacaccaacagcgacaagatgagaatcaaatcaagaactcaacccctttcacaatagctgcaaaaa-atatatatatatttagga--atacctaaccaaggaggtgaaagaccactacaaggaaaactacaaaattctgctgaaagaaatcatagatgacataaacaaatggaaacatatcccatgctcatggatgggtagaatcaatattgtgaaaatgaccatactgccaaaatcaatctagaaattcaatgcaattcccaccaaaataccaccatcattcttcacagaattaggaaaaacaattctagaagtcatatggaaccaaaaaagagcccacatatccaaagcaagactaagcaaaaacaacaaatcaggaggcatcacattacctgacttcagacaatactataagaccataatcaccaaaatagcatggtactggtataaaaataggcacacagaccaacggaacagaatagaaaacccagaaataaacccaaatacttacagccaactgatcttcaacaaagcaaacaaaaacataaagtggggaaaggacaacctattcaacaaatggtgttgggataatcggcaagccacatgtagaagattgaaactggatcctcatctctcaccttatacaaaaatcaattcaaaatggatcaaacacttaaatctaagacctgaaaccataaagattctagaagataacattggaagaacccttctatacattgtcttaggcaaagacttcatgacttagaatccaaaagcagatgcaacaaaaacaaagataaataaataggacttaaactaaaaagcttttgcacagcaaaagcaataatcagcagagttaacagataacccacagagtgagagaaaatcttcgcaatctatacatccaacaaaggactaatatccggaatctacaaagaactgaaacaaatcagcaagataaaaacaagcaatcccatcaaaaagtgggctaaggacatgaatagacaattctcaaaagaagatatacaaatggccatcaaacatatggaaaaatgctcaacatcactaatgatcagggaaatgcaaatcaaaactgcagtgtaataccaccccactcctacaagaagggccataatcaaaatagatgctggcacagatgcagctaaaagggaacacttttacactgttggtgggaatgtaaactagtacaaccactatgggaaacattgtggagattctttaaagaactaaaagtagatctactgtttgatccagcaattccactactaggtatctagccagaggaaaagaagtcattattt-aaaaaaaagatacttgcacacacatactgaatgcacattttgaatggcattgaatgcagcacattttgaaatggcaaaaaaatatgaaaatagtgcaaatgcccctcaatcaatgagtagat-aaagaaattttgtgtgtgtgtgtgtgtgtgtatacatatatatat-------------------------------aaagaa i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4445561 2671 + 32716333 aaataacaaagaccagtgcagagctaaatgaaactgaaac-caaaaaaatacaaaagatatatgaaacaaaaagctggttctttgaaaagaaaagcactattgatagaccattagcaagattaaccaagaaaagaagagagaagatccaaataagctcaattagaaataaaacaggagatattacaaacgataacaaggaaatacaaaagactattcaaggctactatgaacacctttatgtgcacaaactaggaaacctagaggagatggatgaattcctggaaacatacaaccctcctagattaaaccagaaagatatagaatctctgaacagatcagtaaaaagcagtgagattgaaacggtaac-aaaa-aaatgccaacaacaaaa-----aaaa-agtaccagacggattcacagctgaattctatcaaatattcaaagaagaattggtaccaatcctatagaaaccatttcaaaagataaagaaagagggaatcctccctaaatcattctatgaagccagtatcaccttaataccaatactagaaaagaacataacaaaaaaagaagactacagaccagtatccctgatgaatatagaggtaaaaatcctcaacaaaatactagtgaaacaaatccaacagcatatcaaaaagataattcaccatgatcaagtgggcttcaaca--gggatgcaaggatagtttaacatctgcaagccaataaatgtgatacactacataaacagaattaaaagcaaaaatcacataatcatctcaatagatgcaggaaagcatttgacaaaatccaacaccccttttgattaaagtcctcagcaaaattggcatacacgggacacaccttaaggtaataaaaactagtaatatctatgacaaactcacagccaacgttatattgaatggggaaaagttgaaagcattttctgtgagaactggaacgagacaaggatgcccactttcaccacttctattgaacata--ctattggaagtcctagccagaacaatcagacgaagagaaagaaataaagggcatccaaatcagtaaagatgaagtcaaactgttgctgtttgcagatgatatgatcatatacctagaaaaccctaaagactcatgcaaaaagctcctagtactgaataatgaattcagcaaagtttcaggataaaaaattaaggtacacaaatcagtaggtctgctacaccaacagcaacaagatgagaatcaaatcaagaactcaacccctttcacaatagctgcaaaaatatatacatatatttaggaatatacctaaccaaggaggtgaaagaccactacaaggaaaactacaaaatactcgtgaaagaaatcatagatggcataaacaaatggaaacatatcccatgctcatgaatgggtagaatcaatattgtgaaaatgaccatactgccaaaatcaatctagaaattcaatgcaattcccatcaaaataccaccatcattcttcacagaactaggaaaaacaattctagaagccatatggaaccaaaaaagagcccacatatccaaagcaagactaagcaaaaagaacaaatctggaggcatcacattacctgacttcagacaatactataagaccatagtcaccaaaatagcatggtactggtataaaaataggcacacagaccaatggaacagaatagaaaacccagaaataaacccaaatacttacagacaactgatcttcgacaaagcaaacaaaaacatagagtggggaaaggacaacctattcaacaaatggtattgggataatcggcaagccatatgtagaagattgaaactggatcctcatctctca-ctcattcaaaaatcaattcaagatggatcaaacacttaaatctaagacctgaaaccataaagattctagaagataacattggaagaacgcttctatacattgtcttaggcaaagacttcatgacttagaatccaaaagcagatgcaacaaaaacaaagataaataaataggacttaaactaaaaagcttctgcacagcaaaagaaataatcagcagagttaacagataacccacagagtgagagaaaatctttgcaatctatacatccaacaaaggactaatatccggaatctacaaagaactgaaacaaatcagcaagataaaaacaagcaatcccatcaaaaagtgggctaaggacataaatagacaattctcaaaagaagatatacaaatggccaacaagcatgtggaaaaatgctcaacattactaatgatcagggaaatgcaaatcaaaactgcaatgcaataccacctcactcctacaagaatggccataatcaaaatagatgctggcacagatgcagctaaaagagaacacttttatactgttgatgggaatgtaaactagtaccaccactatgggaaacagtgtggagattctttaaagaactaaaagtagatctactgtttgatccagcaatcccaccactaggtatctagccagaagaaaagaagtcattatac--aaaaaaagatacttgcacacacat-----------------------atttatagcagcatattttgaaatggc--aaaaatatgaaaacagcccaaatgcccatcaaacaatgagtagat-aaagaaa--ttgtgtgtgtgtgtgtgtg--tatatacatatatat-------------------------------aaagaa i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162225400 2668 - 192294377 aaataacaaagaccagtgcagagctaaatgaaattgaaacaaaaacaaatacaaaaaatatatgaaacaaaaagctggttctttgaaaagaaaagcactattgatagaccattagcaagattaaccaagaaaagaagagagaagatccaaataagctcaattagaaacaaaacaggagatattaccaatgataacaaagaaatacaaaagattattcaaggctactatgaacacctttatgtgcacaaactagaaaacctagaggagatggataaattcctggaaacatacaaccctactagattaaatcagaaacatatagaatctctgaacagaccaataaaaagcagtggaatttaaatggtaataaaaacaaatgccaacaacaacaacaacaaaataggaccaaatggattcacagcttaattctatcagacattcaaggaagaattggtaccaatcctatggaaaccatttcaaaagataaagaaagagggaatcctccctaaatcattctatgaagccagtatcaccttaataccaaaaccagaaaagaacataac----aaagaaaactacagaccaatatccctgatgaatatagatg-aaaaatcctcaacaaaatactagtgaaacaaatccaacagcatatcaaaaagataattcaccatgatcaagtgggtttcaaca--gggatgcagggatagtttaacatctgcaagtcaataaatgtgatacactccatagacagaattaaaaacaaaaatcacataatcatctcaatagatacaggaaagcatttgacaaaatccaataccccttttgattaaagccctcagcaaaatcggcatacatgggacataccttaaggtaataaaagctagtaatatctatgacaaactcccagccaatgttatatggaatggggagaagttaaaagcattttctctgagaactggaacaagacaaggatgcctactttaatcacttctattgaacataatctactggaagtcctagccagaacaatcagac-aagagaaagaaataaagggcatccaaatcagtaaagaggaagtcaaactgttgctgtttgcagatgatatgatcatatatctagaaaaccctaaagattcatgcaaaaagctcctagtactgaataatgaattcatccaagtttcaggataccaaattaaggtacacaaatcagtagatctgctacaccaacagtgacaagatgagaatcaaatcaagaactcaacccttttcacaatagctgcaaaaa-----caaaatacttaggaatatacctaaccaaggaggtgaaagaccactacaaggaaaactac-aaattctgctgaaagaaatcatagatgacgtaaacaaatagaaacacatcccatactcatggatgggtagaatcaatattgtgaaaatgaccacactgccaaaagcaatctaccaattcaatgcaattcccatcaaaataccaccatcattcttcacagaactaggaaaaacaattctggaattcacatggaaccaaaaaagagcccacatatcaaaagcaagactaagcaaaaagaacaaatctggaggcatcacattacctgacttcagataacactgtaagaccatagtcaccaaaacagcatggcactggtataaaaataggcacatagaccaatggaacagaatagaaaacctggaaataaacccaaatacttacagctaactgatcttcgacaaagcaaacaaaagcataaagtgggaaaaggacagcctattcaacaaatgatgttgggataatcggcaagccacaagtagaagactgaagctggatcctcatctctcaccttatacaaaaatcaattcaagatggaccaaacacttaaatctaagacctgaaaccataaagattctaggagataacatcggaaggccccttctatacatcgtcttaggcaaagacttcatgacttagaatcaaaacgcagatgcaacaaaaacaaagataaataaataggacttaaactaaaaagcttctgcactgcaaaagaaataatcagcagagttaacagacaacccgcagagtgagagaaaatcttcacaatctatacatccaacaaaggactaatatccgcaatctacaaagaactgaaacaaatcagcaagataaaaacaagcaattccatcaaaaagtgggcaaaggacatgaatagacaatgctcaaaagaagatatacaaatggccagcaagcatatggaaagatgctcaacataactaatgatcagggaaatgcaaatcaaaaccgcaatgtaatactacctcactcctacaagaatggcaataatcaaaatagatgctggcacagatgcggctaaaagggaacatttttacactgttggtgggaatgcaaactagtacaaccactatgggaaacagtgtggagattctttaaagaactaaaagtagatctactgtttgatccagcaatcccactactaggtatctagccagaggaaaagaagtcattatac-aaaaaaaaaatacttgcacacacat-----------------------atttatagcaacacattttgtaattgc--aaaaatttgaaaacagcccaaatgcccatcagtcaatgagtagat-aaagaaa--ttgtgtgtgcgtgtgagtatatatatacacacacat------------------------------------- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150909366 2668 - 180432695 aaataacaaAGACCAGTGCagagctaaatgaaattgaaacaaaaacaaatacaaaagatatataaaacaaaaagctggttctttgaaaagaaaagcactattgatagaccattagcaagattaaccaagaaaagaagagagaagatccaaataagctcaattagaaacaaaacaggagatattacaaatgataacaaagaaatataaaagattattcaaggctactatgaacacctttatgtgcacaaactagaaagcctagaggagatggataaattcctggaaacatacaaccctcctagattaaaccagaaagatatagaatctctgaacagaccaataaaaagcagtgagattgaaatggtaataaaaacaaatgccaacaacaacaacaacaaaataggatcaaatggattcacagttgaattctat----caTTCaaggaagaattggtaccaatcctatggAAACCatttcaaaagataaagaaagagggaatcctccctaaatcattctaggaagccagtatcaccttaataccaaaaccagaaaagaacataacaaaaaaagaaaactacagaccaatatccctgatgaatatagatg-aaaaatcctcaacaaaatactagtgaaacaaatccaacagcatatcaaaaagataattcaccatgatcaagtgggtttcaaca--aggatgcagggatagtttaacatctgcaagtcaataaatgtgatacactccatagacagaattaaaaacaaaaatcacataatcatctcaatagatacaggaaagcatttgacaaaatccaacaccccttTTGATTAAAGCcttcagcaaaatcggcatacatgggacataccttaaggtaataaaaggtAGTAATATCTATGACAAACTACCAGCCAATGTTACatggaatggggaaaagttgaaagcattttctctgagaactggaacaagacaaggatgcctactttaaTCACTTCTATTGAACATAAtctactggaagtcctagccagaacaagcagac-aagagaaagaaataaagggcatccaaatcagtaaagaggaaatcaaactgttgttgtttgcagatgatatgatcacatacctagaaaaccctaaagactcatgcAAAAAGCTCCTAGTACTGAATAATGAATTCatcaaagtttcaggatacaaaattaaggGGCACAAATCAGTAGGTCTGCTACACCAACAGCGACAAgatgagaatcaaatcaagaactcaacccttttcacaatagctgcaaaac-----caaaatacttaggaatatacctaaccaaggaggtgaaagacctctacaaggaaaactac-aaattctgctgaaagaaatcatagatgacgtaaacaaatagaaacacatcccatactcatggatgggtagaatcaatattgtgaaaatgaccacactgccaaaagcaatctaccaATTCAATGCAAtacccatcaaaataccaccatcattcttcacagagctaggaaaaacaattctacaattcacatggaaccaaaaaagagcccacatatcaaaagcaagactaagcaaaaagaacaaatctggaggcatcacattacctgacttcagatAACACTGTaagaccatagtcaccaaaacagcatggcactggtataaaaataggcacatagaccaatggaacagaatagaaaacccggaaataaacccaaatacttacagctaactgatcttcgacaaagcaaacaaaagcataaagtgggaaaaggacaacctattcaacaaatgatgttgggatAATCGGCAAGCCACAAGTAGAAGACTGaagctggatcctcatctctcaccttatacaaaaatcaattcaagatggatcaaacacttaaatttaagacctgaaaccataaagattctaggAGATAACATCGGAAGGCCCCTTCTATACATTGTCTTAGGCAAACACTTCATGACTTAGAATCAAAACGCAgatgtaacaaaaacaaagataaataaataggacttaaactaaaaagcttctgcaccgcaaaagaaataatcagcagagttaacagacaacccacagagtgagagaaaatcttcacaatctatatatccaacaaaggactaatatccgcaatctacaaagaactgaaacaaatcagcaagataaaaacaagcaattccatcaaaaagtgggcaaaggacatgaatagacaatgctcaaaagaagatatacaaatggccagcaagcatatggaaagatgctcaacataactaatgatcagggaaatgcaaatcaaaaccgcaatgtaATACTACCTCACTCCTACACGAATGGCAATAATCAAAATAGACGCTGGCACAGATGCGGctaaaagggaacatttttacactgttggtaggaatgtaaactagtacaaccactatgggaaacagtgtggagattctttaaagaactaaaagtagatctactgtttgatccagcaatcccactactaggtatctagccagaggaaaagaagtcattatac-aaaaaaaagatacttgcacacacat-----------------------atttatagcaacacattttgtaattgc--aaaaatttgaaaacagcccaaatgcccatcagtcaatgagtagat-aaagaaa--ttgtgtgtgcgtgtgtgtatatatatacacacacat------------------------------------- i papAnu2.chr3 I 334 C 0 s chlSab2.chr2 15010372 2702 - 90373283 aaATAACAAAgaccagtgcagagctaaatgaaattgaaacaaaaacaaatacaaaagatatataaaacaaaaagctggttctttgaaaagaaaagcactattgatagacaattagcaagattaaccaagaaaagaatagagaagatccaaataagctcaattagaaacaaaacaggagatattacaaatgataacaaataaatataaaagattattcaaggctactatgaacatctttatgtgcacaaactagaaaacctagaggagatggataaattcctggaaacatacaaccctcctagattgaaccagaaagatatagaatctctgaacagaccaataaaaagcagtgagattgaaatggtaataaaaacaaatgccaacaacaacaacaacaaaataggatcaaatggattcacagttgaattctat----cattcaaggaagaattggtaccaatcctatggaaaccatttcaaaagataaagaaagagggaatcctccctaaatcattctaggaagccagtatcaccttaataccaaaaccagaaaagaacataacaaaaaaagaaaactacagaccaatatccctgatgaatatagatg-aaaaatcctcaacaaaatactagtgaaacaaatccaacagcatatcaaaaagataattcaccatgatcaagtgggtttcaacagggggatgcagggatagtttaacatctgcaagtcaataaatgtgatacactccaaagacagaattaaaaacaaaaatcacataatcatctcaatagatacaggaaagcatttgacaaaatccaacaccccctttgattaaagccctcagcaaaatcggcatacatgggacataccttaaggtaataaaaggtagtaatatctatgacaaactaccagccaatgttatatggaatggggaaaagttgaaagcattttctctgagaactggaacaagacaaggatgcctactttaatcacttctattgaacatattctactggaagtcctagccagaacaagcagac-aagagaaagaaataaagggcatccaaatcagtaaagaggaaatcaaactgttgttgtttgcagatgatatgatcacatacctagaaaaccctaaagactcatgcaaaaagctcctagtactgaataatgaattcatcaaagtttcaggatacaaaattaaggtacacaaatcagtaggtctgctacaccaacagcgacaagatgagaatcaaatcaagaactcaacccttttcacaatagctgcaaaaa-----caaaatacttaggaatatacctaaccaaggaggtgaaagaccactacaaggaaaactac-aaattctgctgaaagaaatcatagatgacgtaaacaaatagaaacacatcccatacttatggatgggtagaatcaatattgtgaaaatgaccacactgccaaaagcaatctaccaattcaatgcaattcccatcaaaataccaccatcattcttcacagaactaggaaaaacaattctagaattcacatggaaccaaaaaagagcctacatatcaaaagcaagactaagcaaaaagaacaaatctggaggcatcacattacctgacttcagacaacactgtaagaccatagtcaccaaaatagcatggcactggtataaaaataggcacatcgaccaatggaacagaatagaaaacccagaaataaacccaaatacttacagctaactgatcttcgacaaagcaaacaaaagcataaagtggggaaaggacaacctattcaacaaatggtgtcgggataatcggcaagccacaggtagaagattaaagctggatcctcatctcccaccttatacaaaaatcaattcaagatggatcaaacacttaaatctaagacctgaaaccataaagattctaggagataacattggaaggacccttctatacattgtcttaggcaaagacttcatgacttagaatccaaaagcagatgcaacaaaaacaaagataaataaataggacttaaactaaaaagcttctgcacagcaaaagaaataatcagcagagttaacagacaacccacagagtgagagaaaatcttcacaatctatacatccaacaaaggactaatatccacaatctacaaagaactgaaacaaatcagcaagataaaaacaagcaattccatcaaaaagtgggtgaaggacatgaatagacaatgctcaaaagaagatatacaaacggccagtaagcatatggaaagatgctcaacattactaatgatcagggaaatgcaaatcaaaactgcaacgtaataccacctcactcctacaagaatggcaataatcaaaatagatgctggcacagacgcagctaaaagggaacatttttacaccgttggtgggaatgttaactagtacaaccactatgggaaacagtgtggagattctttaaagaactaaaagtagatctactgtttgatccagcaatcccactactaggtatctagccagaggaaaagaagtcatcatacaaaaaaaaagatacttgcacacacat-----------------------atttatagcagcacattttgcaattgc--aaaaatttgaaaacagcccaaatgcccatcagtcaatgagtagat-aaagaaa--ttgtgTGTGCGTGTGTGTGtatatatatacacacacacattctatatatatatatatatatatagta------ i chlSab2.chr2 I 338 I 31 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13822162 0 + 39895921 C e mm10.chr16 78116694 9034 + 98207768 I e rheMac3.chr3 168558836 5499 - 198365852 I a score=22932.000000 s hg38.chr21_KI270874v1_alt 75050 23 + 166743 attgtgtgtgtatgtatatatat s panTro4.chr21 3687870 23 + 32799110 attgtgtgtgtgtgtatatatat i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16945249 23 + 48394510 attgtgtgtgtgtgtatatatat i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4448232 23 + 32716333 attgtgtgtgtgtgtatatatat i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162228068 23 - 192294377 tatatatatatatatatatatat i macFas5.chr3 C 0 I 27 s papAnu2.chr3 150912034 23 - 180432695 tttatatatatatatatatatat i papAnu2.chr3 C 0 I 37 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13822162 0 + 39895921 C e mm10.chr16 78116694 9034 + 98207768 I e rheMac3.chr3 168558836 5499 - 198365852 I e chlSab2.chr2 15013074 31 - 90373283 I a score=879915.000000 s hg38.chr21_KI270874v1_alt 75073 375 + 166743 at----atatacaccatggactactactaagccacaaaaaggaacaaaataatggtattagcagcaacttggatggaattggagacttattctaagtgaacaaactcaggaatggaaaacctaacattgtattttctcactcatatgtggaagctaagctatgagtgcacaaagacatgagaataatagactggactttggagactcaggggtaagggtgggaatggcaaaagataaaagactgcatattgggtacagtatacactgctcgggtgatgggtgcacccaaatctcagaaatcaccactaaagaacttatccatgtaaccaaacactacctattccccaaaaccctgttggaataaa----aaataaataaataa s panTro4.chr21 3687893 375 + 32799110 at----atacacaccatggactactactaagccacaaaaaggaacaaaataatggtattagcagcaacttggatggaattggagacttattctaagtgaacaaactcaggaatggaaaacctaacattgtattttctcactcatatgtggaaactaagctatgagtgcacaaagacataagaataatagactggactttggggactcaggggtaagggtgggaatggcaaaaaataaaagactacatattgggtacagtgtacactgctcgggtgatgggtgcacccaaatctcagaaatcaccactaaagaacttatccatgtaaccaaacactacctattccccaaaaccctgctggaataaa----aaataaataaataa i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16945272 368 + 48394510 at--------acatcatggactactactaagccacaaaaaggaacaaaataatggtattagcagcaacttggatggaattggagacttactctaagtgaacaaactcaggaatggaaaacctaacattgtattttctcactcatatgtggaaactaagctacgagtgcataaagacataagaataatagactggactttggggactcaggggtaagggtgggaatggcaaaagataaaagactccacattgggtacagtgtacactgctcgggtgatgagtgcaccaaaatctcagaaat---cactaaagaacttatccatgtaaccaaacactacctattccccaaaaccctgttggaataaa----aaaTAAATAAATAA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4448255 379 + 32716333 atatatatatacaccagggactactactaagccacaaaaaggaacaaaataatggtattagcagcaacttggatggaattggagacttattctaagtgaacaaactcaggaatggaaaacctaacattgtattttctcactcatatgtggaagctaagctatgagtgcacaaagacataagaataatagactggactttggggactcaggagtaagggagggaatggcaaaagataaaagactacgcattgggtacagtatacactgctcgggtgatgggtgcaccaaaatctcagaaatcaccactaaagaacttatccatgtaaccaaacaccacctattccccaaaaccctgttggaataaa----aaaTAAATAAATAA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168564335 375 - 198365852 at----atatatattatggaatactactcagccacaaaaaggaacaaaacaatggtattagcagcaatttggatggaattggagacttattctaagtgaacaaactcaggaatggaaaactaaacattgtatgttctcactcctatgtggaagctaagctatgagggtacaaagacataagaatgatagactggactttggggactcaggggtaagggcgggaatggcaaaagataaaagactacacattgtgtacagtgtacactgctcgggtgatgggtgcaccaaaatctcagaaatcaccactaaagaacttactcacataaccaaataccacctattccccaaaaccctgttgaaatgaa----aaaTAAATAAATAA i rheMac3.chr3 I 5499 C 0 s macFas5.chr3 162228118 375 - 192294377 at----atatatattatggaatactactcagccacaaaaaggaacaaaacaatggtattagcagcaatttggatggaattggagacttattctaagtgaacaaactcgggaatggaaaactaaacattgtatgttctcactcctatgtggaagctaagctatgagggtacaaagacataagaatgatagactggactttggggactcaggggtaagggcgggaatggcaaaagataaaagactacacattgtgtacagtgtacactgctcgggtgatgggtgcaccaaaatctcagaaatcaccactaaagaacttactcacataaccaaataccacctattccccaaaaccctgttgaaatgaa----aaaTAAATAAATAA i macFas5.chr3 I 27 C 0 s papAnu2.chr3 150912094 379 - 180432695 at----atatatattatggaatactactcagccacaaaaaggaacaaaataatggtattagcagcaacttggatggaattggagacttattctaagtgaacaaactcaggaatggaaaactaaacattgtatgttctcacttatatgtagaagctaagctatgagggtacaaagacataagaatgatagactggactttggggactcaggggtaAGGGCGGGAATGGCaaaagataaaagactacacattgtgtacagtgtacactgctcgggtgatgggtgcaccaaaatctcagaaatcaccactaaagaacttactcacataaccaaataccacctattccccaaaaccctgttgaaataaaaaataaataaataaataa i papAnu2.chr3 I 37 C 0 s chlSab2.chr2 15013105 373 - 90373283 at----atatatattatggaatactactcagccacaaaaaggaacaaaataatggtattagcagcaacttggatggaattggagacttattctaagtgaacaaactcaggaatggaaaactaaacattgtatgttctcactcctatgtggaagctaagctatgggggtacaaaaacataagaatgatagactggactttggggactcaggggtaaaggggggaatggcaaaagataaaagactacacattacgtgcagtgtacactgctcgggtgatgggtgcacc-aaatctcagaaatcaccactaaagaacttactcacataaccaaataccacctattcccc-aaaccctgttgaaataaa----aaataaataaataA i chlSab2.chr2 I 31 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13822162 0 + 39895921 C e mm10.chr16 78116694 9034 + 98207768 I a score=117975.000000 s hg38.chr21_KI270874v1_alt 75448 41 + 166743 aaaGGGAAAAATTAATATGACTTATAGCACACAACTGAAGT s panTro4.chr21 3688268 41 + 32799110 aaaGGGAAAAATTAATATGACTTATAGCACACAACTGAAGT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16945640 41 + 48394510 AAAGGGAAAAAATAATATTACTTATAGCAAACAACTGAAGT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4448634 41 + 32716333 AAAGGGAAAAATTAATATGACTTATAGTGCACAACTGAAGT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168564710 41 - 198365852 AAAGGGAAAAATTAGTATGACTTATAGCACACAACTGAAGT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162228493 41 - 192294377 AAAGGGAAAAATTAGTATGACTTATAGCACACAACTGAAGT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150912473 41 - 180432695 aaagggaaaaattagtATGACTTATAGCACACAACTGAAGT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15013478 41 - 90373283 AAAGGGAAAAATTAGTATGACTTATAGCACACAACTGAAGT i chlSab2.chr2 C 0 C 0 s canFam3.chr31 13822162 41 + 39895921 AGAGAGAAAATTTAATGCTGGTTATAGCATACAACTGAAGT i canFam3.chr31 C 0 I 2 e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78116694 9034 + 98207768 I a score=888400.000000 s hg38.chr21_KI270874v1_alt 75489 307 + 166743 AAAAATATGAGTTTTATCCTTAAGCACAGAACAGTAATAGGAAATTTaggcctgtattgaatccatact-ggtgacttattttttccgtattattaaacaagctgttaaactctctgaaaatccattattattttcctctgtacaataaaaaaaaattacctctaccttgaagagttgtgaaaatttggaagaatgtatac-aaatg-actagaggcactaccaggcacatagaatgcactcTTTAT--ATTTACTTC----CTTCCCTC--CCTACTTCCCATTCTGTTACTAGTACACTATGAAGTTTTTAACCAA s panTro4.chr21 3688309 307 + 32799110 AAAAATATGAGTTTTATCCTTAAGCACAGAACAGTAATAAGAAATTTaggcctgtattgaattcatact-ggtgacttatttgttctgtattattaaacaaggtgttaaactctctgaaaatccattattattttcctctgtacaataaaaaaaaattacctctaccttgaagagttgtgaaaatttggaagaatgtacac-aaatg-actagaggcactaccaggcacatagaatgcactcTCTAT--ATTTACTTC----TTTCCCTC--CCTACTCCCAATTCTGTTACTAGTACACTATGAAGTTTTTAACCAA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16945681 306 + 48394510 AAAAATATGAGTTTTATCCTTAAGCACAGAACAGTAATAAGAAATTTagacctgtattgaatccatact-ggtgacttatttgttgtgtattattaaacaagctgttaaactccctgaaaatccattattatcttcctctgcacaat-aaaaaatattacctctaccttgaagagttgtaaaaatttggaagaatgtatac-aaatg-actagaggtactaccaggcatatagaatgcactcTCTAT--ATTTACTTC----CTTCCCTC--Cctactccccattctgttactagtacactatgaagtttttaacaag i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4448675 306 + 32716333 AAAAATATGAGTCTTATCCTTAAGCATAGCACAGTAATAAAAAATTTagacctatattgaatccatact-ggtgacttatttgttgtatgttattaaacacgctgttaaactccctgaaaatccattattattttcctctgtacaat-aaaaaaaattacctctaccttgaagagttgtgaaaatttggaagaatgtatac-aaatg-actagaggcactaccaggcacatagaatgcactcTCTAT--ATTTACTTC----CTTCCTTC--Cctactccccattctgctactagtacactacgaagtttttaacaag i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168564751 304 - 198365852 TAAAATATGAGTTTTATCCTTAAGCACAGCACAGTAATAAGAAATTTagacctgtattgaatccatact-ggtgacttatttgttatgtattattaaataaactgttaaactctctgaaagtccattattattttcctctgtacaat--aaaaaactttcctctatcttgaagagttgtgaaaatttggaagaatgtatac-aaatg-actaga-acaccaccaggcacatagaatgctctcTCTAT--ATTTACTTC----CTTCCCTC--CCTACTCCCCATTCTGTTATTAGTGTACTATGAAGTTTTTAACAAG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162228534 304 - 192294377 TAAAATATGAGTTTTATCCTTAAGCACAGCACAGTAATAAGAAATTTagacctgtattgaatccatact-ggtgacttatttgttatgtattattaaataaactgttaaactctctgaaagtccattattattttcctctgtacaat--aaaaaactttcctctatcttgaagagttgtgaaaatttggaagaatgtatac-aaatg-actaga-acaccaccaggcacatagaatgctctcTCTAT--ATTTCCTTC----CTTCCCTC--CCTACTCCCCATTCTGTTATTAGTGTACTATGAAGTTTTTAACAAG i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150912514 304 - 180432695 TAAAATATGAGTTTTATCCTTAAGCACAGCACAGTAATAAGAAATTTAGACCTGTATTGAATCTGTACT-GGTGACTTATTTGTTATGTATTATTAAATAAGCTGTTAAACTCTCTGAAAATCTATTATCCTTTTCCTctgtacaat--aaaaaaatttcctCTACCTTGAAGAGTTGTGAAAATTTGGAAGAATGTATAC-GAATG-ACTAGA-ATACCACCAGGTACATAGAATGCACTCTCTAT--Atttacttc----cttccctc--cctactCCCCATTCTGTTATTAGTGTACTATGAAGTTTTTAACAAG i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15013519 304 - 90373283 TAACATATGAGTTTTATCCTTAAGCACAGCACAGTAATAGGAAATTTagacctgcattgaatccatact-ggtgacttgtttgttatgtattattaaataagctgttaaactctctgaaaatccattattcttttcctctgtacagt--aaaaaatattcctctaccttgaagagttgtgaaaatttggaagaatgtatac-aaatg-actaga-ataccaccaggcacatagaatgcactcTCTAT--ATTTACTTC----CTTCCCTC--CCTACTCCCCATTCTGTTATTAGTGTACTATGAAGTTTTTAACAAG i chlSab2.chr2 C 0 C 0 s mm10.chr16 78125728 290 + 98207768 AAAGATATGGGTTTTATCTTTAAGTACAATGGAGTAA---GAGGTTTAGG--TGTGGTTAACCCCTGCTGGGTGATATATTTGATTCATAATATTAAACAGCCTTTCAAATTCTCTGGGAATCCATTGTCA----CATCACCACAAT--GAGAAAAT------TAACATGAAGATTTGTAGAAATTTGGAACAAGGTGCAG-AAAAGCATTAGG-ATGGCATCAAGTACGTAGACAGTTTTCTTggt--attca-tca----cttccttg--tctagtctcaatattgttataatggcactgtgagattgttaaacaA i mm10.chr16 I 9034 I 193 s canFam3.chr31 13822205 311 + 39895921 AGAGACATGGGTTCTATTTTTAAGCACAGCAGCATAATAGAAGATTTagacctgtgttaaatccctgctgggtgacttatctgctgtatgttattaaacaagctgttaaactgtctgagaatctattatc----tccactgcacagt-gaaaaaattaacatctactttgaagagttgtgaaaattggggagaatgtatagaaaatg-cctagg-acaacaccaggtgcatagtatgcactccataTTGATTTATTTCTCCACTTCCCCCAGCccagtcccagtcctgttattagtagaccatgaggtcttaagtaaa i canFam3.chr31 I 2 C 0 e calJac3.chr21 21929321 2056 + 50472720 I a score=1167120.000000 s hg38.chr21_KI270874v1_alt 75796 434 + 166743 TCACTTTTGGGGTCTCAGTTTT-ACCTCTATAAACAAGCAAGGCCAAGCTATTTTGACAATTTATAGTCCCAATGTTATGACACATTGTTAGGTCATGAGTAAGTGGGCAATGTGTCACAAGTAGTCCAACCTAATATTAATAATAATTAAATTACCAAAATTTACAAATAAGTTTCTTTTAAAA-TGTACA------------------ATTATAACATCAAAATAAGTCATTAGTACTTCCACTTGCTTTTGAGATGGAGCA-TATGAAGT--AGTTTCGGATGATAAAGATGGAATTGCTC-TAATGCATAGGCTACTTTGTCTCACATAATAGCATTGATGTACCCTTAATAGTTGGATGATTATAAGTTA---CAGCTCTCATATATTATACTTTTCTTAACTGAATATTTCTTACTTATTTTATTTATGTATATGTTTCTAAAAGGAAAAAGATA s panTro4.chr21 3688616 436 + 32799110 TCATTTTTGGGGTCTCAGTTTT-AACTCTATAAACAAGCAAGGCCAAGCTATTTTGACAATTTATAGTCCcaatgttatgacacattgttaggtgatgagtaagtgggcaatgtgtcacaaatagtccaacctaatattaataataattaaattaccaaaatttacaaataagtttcttctAAAA-TGTACA------------------ATTATAACATCAAAATAAGTTATCAGTACTGCCACTTGCTTTTGAGGTGGAGCA-TATGAAGTAGAGTTTCGGATGATAAAGATGGAATTGCTC-TAATGCATAGGCTACTTTGTCTCACATAATAGCATTGATGTACCCTTAATAGTTTGATGATTATAAGTTA---CAGCTCTCATATATTATACTTTTCTTAACTGAACATTTCTTACTTATTTTATTTATGTATATGTTTCTAAAAGGAAAAAGATA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16945987 437 + 48394510 tcactttttgggtctcagtttt-acctctataaaCAAGCAAGGCCAAGCTATTTTGACAATTTATAGTCCCAATGTTATGACACATTGTTAGGTCATGAGTAAGTGGGCAATGTGTCACAAGTAGTCCAACCtaatattaataataattaaattaCCAAAATTTACAAATACGTTTCTTTTAAAG-TGTACA------------------ATTATAACATCAAAATAAGCCATCAGTACTTCCACTTGCTTTTGAGGTGGAGCATTTTGAAGTAGAGTTTCAGATGATAAAGATGGAATTGCTC-TAATGCATAGGCTACTTTGTTTCACATAATAGCATTGATGTACCCTTAATAGTTTGATGATTATAAGTTT---CAGCTCTCATATATTATACTTTTCTTAACTGAACATTTCTTACTTATTTTATGTACGTATATGTTTCTAAAAGGAAAAAGATA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4448981 432 + 32716333 tcacttttggggtctcagtttt-acctctataaaCAAGCAAAGCCAAGCTATTTTGACAATTTATAGTCCCAATGTTATGACACATTGTTAGGTCATCAGTAAGTGGGCAATGTATCACAAGTAGTCCAACCTAATATTAATAATAATTAAATTACCAAAATTTACAAATAAGTTTATTTTAAAA-TGTACA------------------ATTATAACATCAAAATAAGTCATCAGTACTTCCACTTGCTTTTGAGGTGGAGCA-TATGAAGTAGAATTTCAGATGATAAAGATGGAATTGTTC-TAATGCATAGGCTACTTTGTCTCACATAATAGT-TTGATGTACCCTTAA---TTTGATGATTATAAGTTA---CAGCTCTCATATATTATACTTTTCTTAACTGAACATTTCTTACTTATTTTATTTATGTATATGTTTCTAAAAGGAAAAAGATA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168565055 435 - 198365852 TCACTTTTGGGGTCTCAGTTTT-ACCTCTCTAAACAAGCAGAGCCAAGCCAGTTTGACAATTTATAGTCCcagtgttatgacacattgttaggtcatgagtaagtgggcaatgtatcacaagtactccaacctaatattaataatagttaaattaccaacatttacaaataagtttctt-tAAAA-TGTACA------------------ATTATAACGTCAAAATAAGTCATCAGTACTTCCACTTGCTTTTCAGGTGGAGTA-TATGAAGTAGAGTTTCAGATGACAAAGATAGAATTGCTC-TAATGCATGGACTACTTTGTCTCACATAATAGCTTTGAGGTACCCTTAATAGTTGGATGATTATAAGTTA---CAACTGTCATAGATTATACTTTTCTTAACTGAACATTTCTTACTTATTTTATTTATGCATATGTTTCTAAAAGGAAAAAGATA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162228838 435 - 192294377 TCACTTTGGGGGTCTCAGTTTT-ACCTCTCTAAACAAGCAGAGCCAAGCCAGTTTGACAATTTATAGTCCcagtgttatgacacattgttaggtcatgagtaagtgggcaatgtatcacaagtactccaacctaatattaataatagttaaattaccaacatttacaaataagtttctt-tAAAA-TGTACA------------------ATTATAACGTCAAAATAAGTCATCAGTACTTCCACTTGCTTTTCAGGTGGAGTA-TATGAAGTAGAGTTTCAGATGACAAAGATAGAATTGCTC-TAATGCATGGACTACTTTGTCTCACATAATAGCTTTGAGGTACCCTTAATAGTTGGATGATTATAAGTTA---CAACTGTCATAGATTATACTTTTCTTAACTGAACATTTCTTACTTATTTTATTTATGCATATGTTTCTAAAAGGAAAAAGATA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150912818 435 - 180432695 TGACTTTTGGGGTCTCAGTTTT-ACCTCTATAAACAAGCAGAGCCAAGCTAGTTTGACAATTTATAGTCCCAATGTTATGACACATTGTCAGGGCATGAGTAAGTGGGCAATGTATCACAAGTACTCCAAcctaatattaataatagttaaattaccaaaatttacaaataagtttctt-taaaa-tgtaca------------------attataacATCAAAATAAGTCATCAGTACTTCCACTTGCTTTTGAGGTGGAGTA-TATGAAGTAGAGTTTCAGATGACAAAGATAGAATTGCTC-TAATGCATGGACTACTTTGTTTCACATAATAGCTTTGAGGTACCCTTAATAGTTGGATGATTATAAGTTA---CAACTGTCATATATTATACTTTTCTTAACTGAACatttcttacttattttatttatgcatatgtttctaaaaggaaaaagata i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15013823 435 - 90373283 TCACTTTTGGGGTCTCAGTTTT-ACCTCTATAAACAAGCAGAGCCAAGCTAGTTTGACAATTTATAGTCCcaatgttatgacacattgtcaggtcatgagtaagtgggcaatgtatcacaagtactgcaacctaatattaataatagttaaattaccaaaatttacaaataagtttctt-tAAGA-TGTACA------------------ATTATAACATCAAAATAAGTCATCAGTACTTCCACTTGCTTTTGAGGTGGAGTA-TATGAAGTAGAGTTTCAGATGACAAAGATAGAATTGCTC-TAATGCATGGACTACTTTGTCTCACATAATAGCTTTGAGGTACCCTTAATAGTTGGATGATTATAAGTTA---CAACTGtcatatattatacttttcttaactgaacatttcttacttattttatttatgcatatgtttctAAAAGGAAAAAGATA i chlSab2.chr2 C 0 C 0 s canFam3.chr31 13822516 441 + 39895921 ttactctttaggtctcagttttaatctctgaaaaaagacagagctgaactagTGcaacaattagcaaccccaatttcatgacac--tgttataacaaaagcaactgggccatgtgtcacaagtagttcaacc------taataataattaaattaccaagattcacagataattttgttttaaaactgtatagctgttccagttatctccactataaaatcaagatcaggcactggtactt-cacttgctttAG-GGTGAAATA-AATGAAGT--AGTTTCAAATAACAAAGATGAAGTTGCTCATCACACACAGTCTACTTT-----ATATAATAGCCTTTATTTACTCTTAAGAATTGGGTGATTATGAATTATTGTAATTCTCATAAATTATATTTTTC-TAACTGAAAATTTCTTAGTGACCTTATCTATGTACATATTTTT-AAAGGAAAAAGATA i canFam3.chr31 C 0 I 231 e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78126018 193 + 98207768 I a score=23869.000000 s hg38.chr21_KI270874v1_alt 76230 15 + 166743 ACACCAA-------TTTTTTTT s panTro4.chr21 3689052 16 + 32799110 ACACCAA------CTTTTTTTT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16946424 17 + 48394510 ACACTAA-----TTTTTTTTTT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4449413 16 + 32716333 ACACTAA------TTTTTTTTT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168565490 22 - 198365852 ACATTAATTGTTTTTTTGTTTT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162229273 22 - 192294377 ACATTAATTGTTTTTTTTTTTT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150913253 18 - 180432695 acattaa----ttttttttttt i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15014258 17 - 90373283 ACATTAA-----TTTTTTTTTT i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13822957 231 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I a score=440647.000000 s hg38.chr21_KI270874v1_alt 76245 154 + 166743 AAGTCTGTAGTT-CTATACACTTTACTTCCCTGCAAAACCCTTTGTCATTTCTCAAATCAGAGTGTGCTGATGAGAGTG-TCTGAAGCAAACCATGATCATCCTTAGCGCTTGTCTCAGTGAAGACAATGTTGGAAACCACTGAATTTCATCACTA s panTro4.chr21 3689068 154 + 32799110 AAGTCTGTAGTT-CTATACACTTTACTTCCCTGCAAAACCCTTTGGCATTTCTCAAATCAGAGTGTGCTGATGAGAGTG-TCTGAAGCAAACCATGATCATCCTTAGTGCTTGTCTCAGTGAAGACAGTGTTGGAAACCACTGAATTTCATCTCTA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16946441 154 + 48394510 AAGTCTGTAGTT-CTATACACTTTACTTCCCTGCAAAACCCTTTGGCACTTCTCAAATCAGAGTGTGCTGATGAGAGTG-TCTGAAGCCAACCATGATCATCCTTAGTGCTTGTCTCAGTGAAGACAATGTTGGAAACCACTGAATTTCATCTCTA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4449429 154 + 32716333 AAGTCTGTAGTT-CTATATACTTTACTTCCCTGCAAAACCCTTTGGCATTTCTCAAATCAGAGTGTGCTGATGAGAGTG-TCTGAAGCAAACCATGATCATCCTTAGTGTTTGTCTCAGTGAAGACAATGTTGGAAACCACTGAATTTCATCTCTA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168565512 154 - 198365852 AAGTCTGTAGTT-CTCTACACTGTACTTCCCTGCAAAACCCTTTGGCATTTCTCAAATCAGAGTACGCTGATGAGAATG-TCTGAAGTAAACCATGATCATCCTTGGTGCTTGTCTCAGTGAAGACAATGTTGGAAACCACTGAATTTCACCTCTA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162229295 154 - 192294377 AAGTCTGTAGTT-CTCTACACTGTACTTCCCTGCAAAACCCTTTGGCATTTCTCAAATCAGAGTACGCTGATGAGAATG-TCTGAAGTAAACCATGATCATCCTTGGTGCTTGTCTCAGTGAAGACAATGTTGGAAACCACTGAATTTCACCTCTA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150913271 154 - 180432695 aagtctgtagTT-CTATACACTTTACTTCCCTGCAAAACCCTTTGGCATTTCTCAAATCAGAGTATGCTGATGAGAATG-TCTGAAGTAAACCATGATCATCCTTGGTGCTTGTCTCAGTGAAGACAATGTTGGAAACCACTGAATTTCACctcta i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15014275 155 - 90373283 AAGTCTGTAGTTACTCTACACTGTACTTCCCTGCAAAACCCTTTGGCATTTCTCAAATCAGAGTATGCTGATGAGAATG-TCTGAAGTAAACCATGATCATCCTTGGTGCTTGTCTCAGTGAAGACAATGTTGGAAACCACTGAATTTCACCTCTA i chlSab2.chr2 C 0 C 0 s canFam3.chr31 13823188 154 + 39895921 AAGTCTGTAGCT-CTATAGGCTTTACTT-GCTATGAAACTCTCCAGCATTTCTCAAATCAGAGTATATTGATGACAGTGTTCTGAATACAAACATAATCATCCTTGATGTTTGTTCCAATGGAGAAAATGTTGGGGATCGCTGGATTACATCATCA i canFam3.chr31 I 231 I 5 e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78126018 193 + 98207768 I a score=1571959.000000 s hg38.chr21_KI270874v1_alt 76399 668 + 166743 AGGA--TTTTTTCTTTTAGTGTTGGTATCGTTTGATGTCTTTCTATTTATTTTTAttttt------------------------------------------------tat-tttagatatagggagtgcacagtcttgtttgttacatgtattacatgtgtaatggtggggattgggtttctagtctacctataatccaaatattgaacatcattatacctaataggtaattttcaaccctcactcctccctaccttccccgctttcagagttttcagtgtctattatctccacctttacatttatgtgtactcactgtttagctcccacttgtaagtgagaacatgtgatatttgatcttgtgcttctaagttagtctcaggatCTTTTTATCTGCAAACCATCTATGTTATCCCCCAACAAGTCTAGACATGCAAACATGTTTGCAAGTAAATGCTCTTTGATAAAAGAAACCCTTTAAGAAATTCTTGGGAAAACTTTGTAATAACTGTAAACATTTCAAAGTATTATGCCATAATTTTGGTGTATTATAGGAGCAATAGAAAAAAAAGGATTCTTTAGTTAAAATGGCAAAACCCACTTTAGAAAGAACATGTCTAAAACATGATGTAACTCAGAAAAAGAATTATTGGATCTTAAACAAAGAAAAGGATTATCAAAGCATTTGACTAGATTGTACAGTACCTCTGATTATCTG s panTro4.chr21 3689222 665 + 32799110 AGGA-TTTTTTTCTTTTAGTGTTGGTATCATTTGATGTCTTTCTATTTATTTTTAttttt------------------------------------------------tat-tttagatatagggagtgcacagtc----ttgttacatgtattacatgtgtaatggtggggattgggtttctagtctatccataatccaaatattgaacatcattatacctaataggtaattttcaaccctcactcctccctaccctcccccctttcagagttttcagtgtctattatctccatctttacatttatgtgtactcactgtttagctcccatttgtaagtgagaacatgtgatatttgatcttgtgcttctaagttagtctcaggatCTTTTTATCTGCAAACCATCTATGTTATCCCCCAACAAGTCTAGACATGCAAACATGTTTGCAAGTAAATGCTCTTTGATAAAAGAAACCCTTTAAGAAATTCTTGGGAAAACTTTGTAATAACTGTAAACATTTCAAAGTATTATGCCATAATTTTGGTGTATTATAGGAGCAATAGAAAAAAAAGGATTCTTTAGTTAAAATGGCAAAACCCGCTTTAGAAAGAACATGTCTAAAACATGATGTAACTCAGAAAAAGAATAACTGGATCTTAAACAAAGAAAAGGATTATCAAAGCATTTGACTTGATTGTACAGTACCTCTGATTATCTG i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16946595 717 + 48394510 AGGA-TTTTTTTCTTTTAGTGTTGGTATCATTTGATGTCTTTCTAtttatttttatttttatttttatttAGATATAGATATTCTATTTATTTAtttttatttttatctatatttagatatagggagtgcacagtcttgtttgttacatgtattacatgtgtaatggtggggattgggtttctagtctacccataatccaaatattgaacatcattatacctaataggtaattttcaa-cctcactcctccctaccctctcccctttcagagttttcagtgtctattatctccatctttacatttatgtgtactcactgtttagcttccacttgtaagtgagaacatgtgatatttgatcttgtgcttctaagttagtctcaggatCTTTTTATCTGCAAACCATCTATGTTATCCCCCAACTAGTCTAGACATGCAAATATGTTTGCAAGTAAATGCTCTTTGAAAAAAGAAACCCTTTAAGAAATTCTTGGGAAAACTTTGTAATAACTGTAAACATTTCAAAGTATTATGCCATAATTTTGGTGTATTATAGGAGCAATAGAAAAAAAAGCATTCTCTAGTTAAAATGGCAAAACCTGCTTTAGAAAGAACATGTCTAAAACATGATGTAACTCAGAAAAAGAATTATTGGATCTTAAACAAAGAAAAGGATTATCAAAGCATTTGACTTGATTGTACAGTACCTCTGATTATCTG i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4449583 667 + 32716333 AGGA-TTTTTTTCTTTTAGCGTTGGTATAATTTGATGTCTTTCTAtttatttttatttt-------------------------------------------------tat-tttagatacaaggagtgcacaatcttgtttgttacgtgtattacatgtgtaatggtggggattgggtttctagtctacccataatccaaatattgaacatcattatacctaataggtaattttcaaccctcagtcc-ccccaccctcccccctttcagagttttcagtgtctattatctccatctttacatttatgtgtactcactgtttagctcccacttgtgagtgagaatatgtgatatttggtcttctgcttctaagttagtctcaggatCTTTTTATCTGCAAACCATCTATGTTATCCCCCAACAAGTCTAGACATGCAAACATGTTTGCAAGTAAATGCTCTTTGATAAAAGAAACTCTTTAAGAAATTTCTGGGAAAACTTTGTAATAACTGTAAACATTTCAAAGTATTATGCCATAATTTTGGTGTATTATAGGAGCAATAGAAAAAAAAGGATTCTTTAGTTAAAATGGCAAAACCCACTTTAGAAAGAACATGTCTAAAACATGATGTAACTCAGAGAAAGAATTATTGGATCTTAAACAAAGAAAAGGATTATCAAAGCATTTGACTTGATTGTACAGTACCTCTGATTATCTG i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168565666 662 - 198365852 AGGATTTTTTTTCTTTTAGTGTTGGTATCATTTGATGTCTTTCTAtttatttt-------------------------------------------------------tat-tttagatttagcaagtgcacagtcttgtttgttacatgtattacatgtgtaatggtggggattgggtttctagtctacccataatccaaatagtgaacatcattttgcctaataggtaattttcaaccctcactct-ctccaccctccccccttccagagttttccgtggctattatctccatctttacattcatgtgtactcattgtttagctcccacttgtaagtgaaaacatgtggtatttgatcttctgcttctaagttagtctcaggatCTTTTTAACTGCAAACCATCTATGTTATCCCCCAACAAGTTTAGACAAGCAAACACGTTTGCAAGTAAATGCCCTTTGATAAAAGAAACCCTTTCAGAAATTCTTGGCAAAACTTTGTAATAACTGTAAACATTTCAAAGTACTATGCCATAATTTTGGTGTATTATAGGAGCAATTGAAAATAAAGGATTCTTTAGTTCAAATGGCAAAACCCACTTTAGAAAGAACATGTCTAAAACATGATGTAACTCAGAGAAAGAATTACTGGATCTTAAACAAAGAAAAGGATTATCAAAGCATTTGACTTGATTTTACAGTACCTCTGATTATCTG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162229449 662 - 192294377 AGGATTTTTTTTCTTTTAGTGTTGGTATCATTTGATGTCTTTCTAtttatttt-------------------------------------------------------tat-tttagatttagcaagtgcacagtcttgtttgttacatgtattacatgtgtaatggtggggattgggtttctagtctacccataatccaaatagtgaacatcattttgcctaataggtaatgttcaaccctcactct-ccccaccctccccccttccagagttttccgtggctattatctccatctttacattcatgtgtactcattgtttagctcccacttgtaagtgaaaacatgtggtatttgatcttctgcttctaagttagtctcaggatCTTTTTAACTGCAAACCATCTATGTTATCCCCCAACAAGTTTAGACAAGCAAACACGTTTGCAAGTAAATGCTCTTTGATAAAAGAAACCCTTTCAGAAATTCTTGGCAAAACTTTGTAATAACTGTAAACATTTCAAAGTACTATGCCATAATTTTGGTGTATTATAGGAGCAATTGAAAATAAAGGATTCTTTAGTTCAAATGGCAAAACCCACTTTAGAAAGAACATGTCTAAAACATGATGTAACTCAGGGAAAGAATTACTGGATCTTAAACAAAGAAAAGGATTATCAAAGCATTTGACTTGATTTTACAGTACCTCTGATTATCTG i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150913425 662 - 180432695 aggattttttttcttttactgttggtatcatttgatgtctttctatttatttt-------------------------------------------------------tat-tttagatttagcaAGTGCACAGTCTTGTTTGTTACATGTATTACATGTGTAATGGTGGGGATTGGGTTTCTAGTCTACCCATAATCCAAATAGCGAACATCATTATGCCTAATAGGTAATTTTCAACCCTcactct-ccccaccctcccccctTCCAGAGTTTTCCGTGGCTATTATCTCCATCTTTACATTcatgtgtactcattgtttagctcccacttgtaagtgaaaacatgtggtatttgatctTCTGCTTCTAAGTTAGTCACAGGATCTTTTTAACTGCAAACCATCTATGTTATCCCCCAACAAGTTTAGACAAGCAAACACGTTTGCAAGTAAATGCTCTTTGATAAAAGAAACCCTTTCAGAAATTCTTGGCAAAACTTTGTAATAACTGTAAACATTTCAAAGTACTATGCCATAATTTTGGTGTATTATAGGAGCAATTGAAAATAAAGGATTCTTTAGTTCAAATGGCAAAACCCACTTTAGAAAGAACATGTCTAAAACATGATGTAACTCAGAGAAAGAATTACTGGAtcttaaacaaagaaaaggaTTATCAAAGCATTTGACTTGATTTTACAGTACCTCTGATTATCTG i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15014430 662 - 90373283 AGGATTTTTTTTCTTTTAGTGTTGGTATCATTTGATGTCTTTCTAtttatttt-------------------------------------------------------tat-tttagatttagcaagtgcacagtcttgtttgttacatgtattacatgtgtaatggtggggattgggtttctagtctacccataatccaaatagtgaacatcattatgcctaataggtaattttcaaccctcactct-ccccaccctcccccgttccagagttttcagtggctattatctccatctttacaatcatgtgtactcattgtttagctcccacttgtaagtgaaaacatgtggtatttgatcttctgcttctaagttagtctcaggatCTTTTTAACTGCAAACCATCTATGTTATCCCCCAACAAGTTTAGACAAGCAAACACGTTTGCAAGTAAATGCTCTTTGATAAAAGAAACCCTTTCAGAAATTCTTGGGAAAACTTTGTAATAACTGTAAACATTTCAAAGTACTATGCCATAATTTTGGTGTATTATAGGAGCAATTGAAAATAAAGGATTCTTTAGTTCAAATGGCAAAACCCACTTTAGAAAGAACATGTCTAAAACATGATGTAACTCAGAGAAAGAATTACTGGATCTTAAACAAAGAAAAGGATTATCAAAGCATTTGACTTGATTTTACAGTACCTCTGATTATCTG i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13823342 5 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I a score=361591.000000 s hg38.chr21_KI270874v1_alt 77067 130 + 166743 CCGATTCACAACCCTTTAATATCTTATATTTATTCCAATATGGAAAATATAGTGCACCTGGTAAAATTAGGCAATATTTAAATTCCATGCTCAACCTATTTAAAATATCAACTCAAAAATATTATAGCAC s panTro4.chr21 3689887 130 + 32799110 CCAATTCACAACCCTTTAATACCTTATATTTATTCTAATATGGAAAATATAGTGCACCTGGTAAAATTAGGCAATATTTAAATTCCATGCTCAACGTATTTAAAATATCAACTCAAAAATATTATAGCAC i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16947312 130 + 48394510 CCGATTCACAACCCTTTAATATCTTATATTTATTCTAATATGGAAAATATAGTGCACCTGGTAAAATTAGGCAATATTTAAATTCCATGCTCAACCTATTTAAAATATCAACTCAAAAATATTATAGTAC i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4450250 130 + 32716333 CCCATTCACAACCCTTTAATATCTTATATTTATTCTAACATGGAAAATATAGTACACCTGGTAAAATTAGGCAATATTAAAATTCCATGCTCAACCTATTTAAAATATCAACTCAAAAATATTATAGTAC i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168566328 130 - 198365852 CCTGTTCACAACCCTTTAATATCTTATATTTATTCTAATATGGAAAATATAGTACACCTGGTAAAATTAGGCAATATTTAAATTCCGTGCTCAACCTATTTAAAATATCAACTCAAAAATATTATAGTAT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162230111 130 - 192294377 CCTGTTCACAACCCTTTAATATCTTATATTTATTCTAATATGGAAAATATAGTACACCTGGTAAAATTAGGCAATATTTAAATTCCGTGCTCAACCTATTTAAAATATCAACTCAAAAATATTATAGTAT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150914087 120 - 180432695 CCTGTTCACAACCCTTTAATATCTTATATTTATTCTAATATGGAAAATATAGTACATCTGGTAAAATTAGGCAATATTTAAATTCCATGCTCAACCTATTTAAAATATCAACTCAAAA----------AT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15015092 130 - 90373283 CCTGTTCACGACCCTTTCATATCTTATATTTATTCTAATATGGAAAATATAGTACACCTGGTAAAATTAGGCAATATTTAAATTCCGTGCTCAACCTATTTAAAATATCAACTCAAAAATATTATAGTAT i chlSab2.chr2 C 0 C 0 s canFam3.chr31 13823347 125 + 39895921 CCCATTCACAACTCTTTAATATCATAGATTTCTTCCAATATGGAAAGTATAGCACTCCTGGTAAAATAAGTC----TTTTAATTCCATTCTTAACTTACTTGACATGTCAACTCAAAAATA-CATAGTAT i canFam3.chr31 I 5 I 1632 e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78126018 193 + 98207768 I a score=26200.000000 s hg38.chr21_KI270874v1_alt 77197 9 + 166743 ATATCTTGG s panTro4.chr21 3690017 9 + 32799110 ATATCTTGG i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16947442 9 + 48394510 ATATCTTGG i ponAbe2.chr21 C 0 I 822 s nomLeu3.chr25 4450380 9 + 32716333 CTCTCTTGG i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168566458 9 - 198365852 ATATCTTGG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162230241 9 - 192294377 ATATCTTGG i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150914207 9 - 180432695 ATATCTTGG i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15015222 9 - 90373283 ATATCTTGG i chlSab2.chr2 C 0 C 0 s canFam3.chr31 13825104 9 + 39895921 ATACCTTGG i canFam3.chr31 I 1632 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78126018 193 + 98207768 I a score=173051.000000 s hg38.chr21_KI270874v1_alt 77206 70 + 166743 AAGGCAAAATATGACTA--TTTTATCTTTTGGGAATATACACTGTATCAGCTGCCTAGGTTTGCAAAACAAA s panTro4.chr21 3690026 70 + 32799110 AAGGCAAAATATGAGTA--TTTTATCTTTTGGGAATATACACTGTGTCAGCTGCCTAGGTTTGCAAAACAAA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16948273 70 + 48394510 AAGGCAAAATATGAGTA--TTTTGTCTTTTGGGAATATACACTGCATCAGCTGCCTAGGTTTGCAAAACAAA i ponAbe2.chr21 I 822 C 0 s nomLeu3.chr25 4450389 53 + 32716333 AAGGCAAAATATGAGT---TTTTTTTTTTTGGGAATATACACTGTAT----------------CAAAACAAA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168566467 71 - 198365852 AAGGCAAAATATGAGTA-TTTTTTTCTTTTGGGAATATACACTGTATCAGTTCCCTAGGGTTGCAAAACAAA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162230250 71 - 192294377 AAGGCAAAATATGAGTA-TTTTTTTCTTTTGGGAATATACACTGTATCAGTTCCCTAGGGTTGCAAAACAAA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150914216 71 - 180432695 AAGGCAAAAtatgagta-tttttttcttttgggaatatACACTGTATCAGTTCCCTAGGGTTGCAAAACAAA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15015231 72 - 90373283 AAGGCAAAATATGAGTGTTTTTTTTCTTTTGGGAATATACACTGTATCAGTTCCCTAGGGTTGCAAAACAAA i chlSab2.chr2 C 0 C 0 s canFam3.chr31 13825113 69 + 39895921 -GAGCAAAATATGAATA--CTTTATCTTTTTGGAACATACACtgtattagttttctggggttgcataacaaa i canFam3.chr31 C 0 I 3116 e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78126018 193 + 98207768 I a score=300088.000000 s hg38.chr21_KI270874v1_alt 77276 125 + 166743 TTATGACaatgaacaatgaatcaaaacaatgaatatcacaatgaatcaaagaaatgaaaatggaaatatgatatacaaacacctatgaggtacagcaaaagcagtatgatttggaaagtatattg s panTro4.chr21 3690096 125 + 32799110 TTATGACAATGAACAATGAATCAAAAAAATGAATATCACAATGAATCaaagaaatgaaaatggaaatatgatgtacaaacacctatgagatacagcaaaagcagtatgatttggaaagtatattg i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16948343 125 + 48394510 TTATCACAATGAACAATGAATCAAAAAAATGAATATCACAATGAATCAAAGaaatgaaaatggaaatgtgatatacaaacacctatgagatacagcaaaagcagtatgatttggaaagtatattg i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4450442 124 + 32716333 TTATCACaataaacaatgaat-aaaaaaatgaatatcacaatgaatcaaagaaacgaaaatggaaatatgatatacaaacacctatgagatacagcaaaagcagtatgatttggaaagtatattg i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168566538 125 - 198365852 TTATCACCATGAACAATGAATCAAAAAAATGAATATCACAATGAATCaaacaaatgaaaatggaaatatgttatacaaacacctatgaaatacagcaaaagcagtataatttggaaagtatattg i rheMac3.chr3 C 0 I 14 s macFas5.chr3 162230321 125 - 192294377 TTATCACCATGAACAATGAATCAAAAAAATGAATATCACAATGAATCaaacaaatgaaaatggaaatatgttatacaaacacctatgaaatacagcaaaagcagtataatttggaaagtatattg i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150914287 125 - 180432695 TTATCACCatgaacaatgaatcaaaaaaatgaatatcacaatgaatcaaacaaatgaaaatggaaatatgttaTACAAACACCTatgaaatacagcaaaagcagtataaTTTGGAAAGTATATTG i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15015303 125 - 90373283 TTATCACCATGAACAATGAATCAAAAAAATGAATATCACAATGAATCaaacaaatgaaaatggaaatatgttatacaaacacctatgaaatacagcaaaagcagtataatttggaaagtatattg i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I a score=16980.000000 s hg38.chr21_KI270874v1_alt 77401 9 + 166743 catacacat s panTro4.chr21 3690221 9 + 32799110 catacacat i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16948468 9 + 48394510 catatacat i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4450566 9 + 32716333 catacacat i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162230446 9 - 192294377 catacacat i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150914412 9 - 180432695 CATACACAT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15015428 9 - 90373283 catacacat i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I e rheMac3.chr3 168566663 14 - 198365852 I a score=734162.000000 s hg38.chr21_KI270874v1_alt 77410 344 + 166743 ctacacctaaaaagtagaaaaacttgaaataaacaaccaaatgatgcatcttaaagaactaggaaaggaaaagcaaaccaaacctaaaatgagtagaagaaaaaaaaataaagatcagagcagaaataatattgaaatggagaaaacaatataaaatgttaacaaaacaaaaagttaatttttttaagagataaacaaaattgatatacctttagccagacttattaag-g-aaaaaaagaccaaaataaataaaatcagagattaaaagggacacattacaatggataccatggaaattcaaaggatcactagaggctataatgagcaac----tatatatatatatat s panTro4.chr21 3690230 348 + 32799110 ctacacctaaaaagtagaaaaacttcaaataaacaaccaaaggatgcatcttaaagaactaggaaaggaaaagcaaaccaaacctaaaatgagtagaagaaaaaaaaataaagatcagagcagaaataatattgaaatggagaaaacaatataaaatattaacaaaacaaaaagttga-ttttttaagagataaacaaaattgatatacctttagccagacttattaag-gaaaaaaaagaccaaaataaataaaatcatagattaaaaaggacacattacaatggataccatggaaattcaaaggatcactagaggctacaatgagcaactatatatatatatatatat i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16948477 332 + 48394510 ttacacctaaaaagtagaaaaacttcaaataaacaaccaaatgatgaatcttaaagaactaggaaagcaaaagcaaaccaaacctaaaatgagtagaagaaaaaataataaagatcagagcagaaataatattgaaatggagaaaacaatataaaatattaacaaaacaaaaagttga-ttttttaagagataaacaaaattgatatacctttagccagacttattaag-g-aaaaaaagaccaaaataaataaaatcagagattaaaaaggacacattacaatggatacaatggaaattcaaaggatcactagaggctacaatgagaggc----taca----------- i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4450575 305 + 32716333 ctacacctaaaaagtagaaaaacttcaaataaacaacctaatgatgcatcttaaagaactaggaaagcaaaagcaaaccaaacctaaaatgagtagaggaaaaaa-aataaagatcagagcagaaataatattgaaatggagaaaacaatataaaata---------------------------aagagatgaacaaaattgatatacttttagccagacttattaag-a-aaaaaaggaccaaaataaataaaatcagagattaaaaaggacacattacaatggataccatggaaattcaaaggttcactagaggctacaatgagcaac----tata----------- i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168566677 340 - 198365852 ctacatcaaaaaagaagaaaaacttcaaataaacaacctaatgatgtatcttacagaactaggaaag-aaaagtaaaccaaacctaaaatgagtagaagaaaaaaagacaaagatcagagcagaaataatactgaaatggagaaaacaatacaaaatattaacaaaacaaaaagttga-ttttttaagagataaacaaaattgatatacctttagcca-acttattaag-a-aaaaaaagaccaaaataaataaaatcagagattaaaaaggacacgttacaatggatacctcggaaattcaaaggatcac-agaggctacagtgagccgc----tatatatatatatat i rheMac3.chr3 I 14 I 5439 s macFas5.chr3 162230455 340 - 192294377 ctacacttaaaaagtagaaaaacttcaaataaacaacctaatgatgtatcttacagaactaggaaag-aaaagtaaaccaaacctaaaatgagtagaagaaaaaaagacaaagatcagagcagaaataatactgaaatggagaaaacaatacaaaatattaacaaaacaaaaagttga-ttttttaagagataaacaaaattgatatacctttagcca-acttattaag-a-aaaaaaagaccaaaataaataaaatcagagattaaaaaggacacgttacaatggatacctcggaaattcaaaggatcac-agaggctacagtgagccgc----tatatatatatatat i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150914421 340 - 180432695 CTAcacttaaaaagtagaaaaacttcaaataaacaacctaatgatgtaTCTTACAGAACTAGGAAAG-AAAAGTAAACCAAACCTAAaatgagtagaagaaaaaaagacaaagatcagagcagaaataatactgaaatggagaaaacaatacaaaatattaacaaaacaaaaagttga-ttttttaagagataaacaaaattgatatacCTTTAGCCa-acttattaagaa-aaaaaaagaccaaaataaataaaatcagagattaaaaaGGACACGTTACAA-GGATACCTCGGAAATTCAAAGGATcac-agaggctacagtgagccgc----tatatatatatatat i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15015437 340 - 90373283 ctacacttaaaaagtagaaaaacttcaaataaacaacctaatgatgtatcttacagaactaggaaag-aaaagtaaaccaaacctaaaatgagtagaagaaaaaaagacaaaggtcagagcagaaataatactgaaatggagaaaacaatacaaaatattaacaaaacaaaaagttga-ttttttaagagataaacaaaattgatatccctttagccg-acttattaag-a-aaaaaaagaccaaaataaataaaatcagagactaaaaaggacacattacaatggatacctcggaaattcaaaggatcac-agaggctacaatgagccac----tatatatctatatat i chlSab2.chr2 C 0 I 5418 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I a score=363.000000 s hg38.chr21_KI270874v1_alt 77754 2 + 166743 at s panTro4.chr21 3690578 2 + 32799110 at i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16948809 2 + 48394510 at i ponAbe2.chr21 C 0 C 0 s macFas5.chr3 162230795 1 - 192294377 -c i macFas5.chr3 C 0 I 1 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I e rheMac3.chr3 168567017 5439 - 198365852 I e chlSab2.chr2 15015777 5418 - 90373283 I e papAnu2.chr3 150914761 0 - 180432695 C e nomLeu3.chr25 4450880 0 + 32716333 C a score=2049.000000 s hg38.chr21_KI270874v1_alt 77756 6 + 166743 atatat s panTro4.chr21 3690580 6 + 32799110 atatat i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16948811 6 + 48394510 gagcaa i ponAbe2.chr21 C 0 C 0 s macFas5.chr3 162230797 6 - 192294377 atacat i macFas5.chr3 I 1 I 5407 s papAnu2.chr3 150914761 6 - 180432695 atatat i papAnu2.chr3 C 0 I 2 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I e rheMac3.chr3 168567017 5439 - 198365852 I e chlSab2.chr2 15015777 5418 - 90373283 I e nomLeu3.chr25 4450880 0 + 32716333 C a score=4641.000000 s hg38.chr21_KI270874v1_alt 77762 8 + 166743 atatatat s panTro4.chr21 3690586 8 + 32799110 atatatat i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16948817 8 + 48394510 ctatatat i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4450880 7 + 32716333 -tatatat i nomLeu3.chr25 C 0 C 0 s papAnu2.chr3 150914769 8 - 180432695 caatacAT i papAnu2.chr3 I 2 I 12377 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I e rheMac3.chr3 168567017 5439 - 198365852 I e chlSab2.chr2 15015777 5418 - 90373283 I e macFas5.chr3 162230803 5407 - 192294377 I a score=526952.000000 s hg38.chr21_KI270874v1_alt 77770 1031 + 166743 atatatatatgagtattttgtcttttgggaatatacactgtatcagttccctagggttgcaaaacaaattatcacaatgaacagtgaatc-aaaaagatgaatatcacaatgaatcaaacaagtgaaaatatatat-atatatatcaatacattgaaaagcctagaaaaagcagataaatttctagccacatttaacctaccaagactgaaccattaagaaatctaaaacctgaaaagaacaataacaagtaatgagatcaaagccacaataagacttccagtaaagaaaagcccaggaattgatgacttcactgctgaattttaccaaacatttaaggaaaagcaaatgccgatc---ctacacaaactgttccaaaaaatagaggagcatggatacctccaaactcattctgcaatgccagcattaccctgataccaaaaccaaagactcatcaagaaaagaaaactatacatcaatatcactgatgaacataggcgcaaaaatcctcaacagcatactagcaaaccaagttctgcaacatgtttaaaagattatttattatgaccaagggggatttattccaaggatgcaaggatgattcaacacacccaagtcaattagtataatacataatatcaacggactaaaggacaaaaaccatgtaatcctttcaattgatgcat-aaaaa--catttgacaaaactcaacatctcttcgtgattaaaacaattaaaaaactggatacagaagaaacataactc---aaaaaaaataaaagccatatacaacagacccacagctagtatcatactgaatgaggaaaaactgatggcttttcatctaagatctggaacaagacaagaatgcctacgttcaccactattattcaacataatattggaagtcctagctagagcaatcagacaagagaaaaaaataaagggcacccaactgggaaagaagaagtcagattatctttgtttgcagatgttatgaccttatatttggaaaaacctaaggactccag-aaaaaatatatt s panTro4.chr21 3690594 1031 + 32799110 atatatatatgagtattttgtcttttgggaatatacactgtatcagttccctagggttgcaaaacaaatgatcacaaggaacagtgaatc-aaaaagatgaatatcacaatgaatcaaacaagtgaaaatatatat-atatatctgaatacattgaaaagcctagaaaaagcagataaatttctagccacatttaacctaccaagactgaaccattaagaaatctaaaacctgaaaagaacaataacaagtaatgagatcaaagcaacaataagacttccagtaaagaaaagcccaggaactgatgacttcactgctgaattttaccaaacatttaaggaaaagctaatgccgatc---ctacacaaactgttccaaaaaatagaggagcatggatacctccaaactcattctgcaaggccagcattaccctcataccaaaaccaaagactcttcaagaaaagaaaactatacatcaatatcactgatgaacataggcgcaaaaatcctcaacagcatactagcaaaccaagttctgcaacatgtttaaaagattatttattatgaccaagggggatttattccaaggatgcaaggatgattcaacacacccaagtcaattagtataatacataatatcaacggactaaaggacaaaaaccatgtaatcctttcaattgatgcataaaaaa--catttgacaaaactcaacatctcttcatgattaaaacaattaaaaaactggatacagaagaaacataactc---aaaaaaaataaaagccatatacaacagacccacagctagtatcatactgaatgaggaaaaactgatggcttttcatctaagatctggaacaagacaagaatgcctacgttcaccactattattcaatataatattggaagtcctagctagagcaatcagac--gagaaaaaaataaagggcatccaaccgggaaagaagaagtcaaattatctttgtttgcagatgttatgaccttatatttggaaaaacctaaggactccagaaaaaaatatatt i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16948825 1032 + 48394510 atatatatctgagtattttgtcttttgggaatatacactgtgtcagttccctagggttgcaaaacaaattatcacaatgaacagtgaatc-aaaaaaatgaatatcacaatgaatcaaacaaatgaaa--atatat-atatatctcaatacattgaaaagcctagaaaaagcagataaatttctagccacatttaacctacctagactgaaccattaagaaatctaaaacctgaaaagaacaataacaagtaatgagatcaaagccacaataaaacttccaggaaagaaaagcccaggaattgatgacttcactgctgaattttacggaacatttaaggaaaagctaatgctgatcctactactcaaactgttccaaaaaatagaggagcatggatacctccaaactcattttacaaggccagcattaaccggatatcaaaaccaaagactcatcaagaaaagaaaactatacatcaatatcactgatgaacataggtgtaaaaatcctcaacagcatactagcaaaccaagttctgcaacatgtttaaaagattatttattatgaccaagtgggatttattccaaggatgcaaggatgattcaacacacccaagtcaattagtataatacataatatcaacagactaaaggacaaaaaccatgtgatcctttcaattgatgcat-aaaaa--aatttgacaaaactcaacatctcttcgtcatcaaaaaaattaaaaaactggatacagaagaaacataactc----aaaaaaataaaagccatatacaacagacccacagctagtatcatactgaatgaggaaaacctgatggcctttcatctaagatctggaacaagacaagaatgcctacattcaccactattattcaacataatattggaagtcctagctagagcaatcagacaagagaaaaaaataaagggcatccaactgggaaagaagaagtcaaattatctttgtttgcagatgttatgaccatatatttggaaaaacctaaggactccagaaaaaaatatatt i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4450887 1034 + 32716333 atatatatataagtattttgtcttttgggaatatacactgtatcagttccctagggttgcaaaacaaactatcacaatgaacaatgaatcaaaaaaaatgaacatcacaatgaatcaaa----tgaaaatatatataaaatatatcaatacattgaaaagcctagaaaaagtagataaatttctagccacgtttaacctaccaagactgaaccattaagaaatctaaaacctgaaaagaacaacaacaagtaatgagatcaaagccacagtaagacttccagtaaagaaaagcccagtaattgatgacttcactgctgaatcttaccaaacatttaaggaaaagctaatgccaatc---ctactcaaactgttccaaaaaatagaggagcatggatacctccaaacttattctacaaggccagcattacccggataccaaaaccaaaggcacatcaa-aaaggaaaactatacatcaatataactgatgaacataggtgcaaaaatcctcaacagcatactagcaaaacaagttctgcaacatgtttaaaagattatttattatgaccaagtcagatttattccaaggatgcaaggatgattcaacacacccaagtcacttagtataatacataatatcaacagactaaaggacaaaaaccacgtgatcctttcaattgatgcag-aaaaaatcatttgacaaaactcaacatctcttcgtgattaaaaaaattaaaaaactggatacagaagaaacataactcaaaaaaaaaaataaaaaccatatacaacagacccacagctagtatcatactgaatgaggaaaaactgatggcctttcatctaagatctggaacaagacaagaatacctacattcaccactattattcaacataatattggaagtcctagctagagcaatcagacaagagaaaaaaataaagggcatccaactgggaaagaagaagtcaaattatctttgtttgcagatgttatgaccttatatttggaaaaacctaaggactccagaaaaaaatatatt i nomLeu3.chr25 C 0 I 259 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I e rheMac3.chr3 168567017 5439 - 198365852 I e chlSab2.chr2 15015777 5418 - 90373283 I e macFas5.chr3 162230803 5407 - 192294377 I e papAnu2.chr3 150914777 12377 - 180432695 I a score=1166478.000000 s hg38.chr21_KI270874v1_alt 78801 2227 + 166743 agaatcaataaattcagtaatatttcaggttacaaaattaacatacaaaaaatcagtagcatttccatatgctagcagtgaacaatctgaaaaggatatcaagaaagtaatccaattataatagctataagtaaaattaaatacctactaataaacttaagcgaaaaaagtaaaagttctctacaatgaaaactataaaacattgattaaagaaattgaagaggacacaaaataatagaaagatattgcacgttcatgaattagaagactcaatattgttaaaatgttcatactatccaaagcaatctacagattcaatgcaatccctcaaaataccagtaacatccttcacagcaatagagaagaaaaaaattccaaaatttatatggaaccacgaaaatcaagaacagccaaagctatcctaagcaaaaagaacaaaactggaggaatcacatcacctgacttcaaattacaccacagagctatagtaaccaaaacagtatggtactggcattaaagcagacacatagaccaatggaaaagaatagagaacccagaaatgaatttatatatctacagtggactcattttcaacaaaggtgtcaagaacatactttggggaatgacagtctcttcaatcaatgctgctgggaaaactggatatccatatacagcacaatgaatctcgacccctatctctcatcatacacaaaaatc---------------aaataaaaatgggttaaaaatttaaatctaaagaaactagtaaaagacttcaatcttatacttgcaaactgctataagaagcatgaggaaaactcttcaggacattggtctgagcaaagttttcttgagtaataccatacaagcacaggaaaccaaagcaaaaatgaacgaatgggattacatcaagttggaaaagcttctgaacagctacagaaacaatcaacaaagtgagaagacactccacagaatgggagaaaatatttgtaaactacccatctgacaagggattcataaccagaatatataaggagctcaaacgactcaatagtaaaaaacctaatacgctgatttttaaattggcaaaagatctgaatagacatgtttcaaaagataacacacaaatggcaaacaggtatatgaaaaggtgttcagcatcattgatcatcagataaaaggaaatcaaagctataatgagatatcttctcactccagttaaaatggctctcatccagaaccaccactcaatccagcaatctcattgctggatatatagaggaaaataaatctttctaccataaagacatatgcacacaaatgtccattgcagcactattcacaatagcaaagacatggaatcaacatgaatgcccatcaatgacagattggataaggaaaatgtggtacatatacaccatggaatactatgcagccataaaaaaatgagatgatgtcatttgtgtgaacatggataaagctggacgttattattattagaaaactaacacaggaacagaaaactgaatgccacatgttctcacttataagtggaagctaaatgataagaacttatgaatacaaaggaaaaacaacagacactggggcctacttgagggggagagggaaaggaaagagaggagcaaaaaagataactattaggtacttggcttaatacttgggtaatgaaataatatgtacagcaaacctctgtgacatgtgtttacctatataaaaaaccttcacgtgtacccccaaacctaaaaaaaaaggtaaataaatatacaaataaataaaattacttttatcaaaatacaggcaacgacaaatgctggcaaggatgtgaaggaaagggaaccctcatacactgttgatgggaatgtaaattaataatacaaccactataaaggatggtttaaagtttcctcaaaaaactaaaaatacaactactatctgatccaacaatcccatttctaggtatctacccaaaagaaagaaaattagtatattgaaaagatatctccactcccatgtttattgtagcactattcacaatagccaaggtttgaagcaacctaagtgtccatcaacagatgaatagataaagaaaatgtgatacatatacatgatgaagtactattcagccataaaaaataatgaactcctgtcattttcactaacatggatggaactagagg-tcat-tatgttaagtgaaataagccaggcacataaagac s panTro4.chr21 3691625 2219 + 32799110 agaatcaataaattcagtaatatttcaggttacaaaattaacacacaaaaaatcagtagcatttctatatgctagcagtaaacaatctgaaaaggatatcaagaaagtaatccaattataatagctataagtaaaattaaatacctactaataaacttaagtgaaaaaagtaaaaattctctacaatgaaaactataaaacattgattaaat---ttgaagagtacacaaaataatagaaagatattgcacgttcatgaattagaagactcaatattgttaaaatgttcatactatccaaagcaatctacagattcaatgcaatccctcaaaataccagtaacatccttcacagcaatagagaagaaaaaaattccaaaatttatatagaaccacgaaaatcaagaacagccaaagctatcctaagcaaaaagagcaaaactggatgaatcacattacctgacttcaaattacaccacagagttatagtaaccaaaacagtatggtactggcattaaagcagacacatagaccaatggaaaagaatagagaacccggaaatgaatttatatatctacagccgactcattttcaacaaaggtgtcaagaacatactttggggaatgacagtctcttcaatcaatgctgctgggaaaactggatatccatatacagcacaatgaatctcgacccctatctctcatcatatacaaaaatc---------------aaataaaaatgggttaaaaatttaaatctaaagaaactagtaaaagacttcaatcttatacttgcaaactactataagaagcatggggaaaactcttcagaacattggtctgggcaaagttttcttgagtaataccacacaagcacaggaaaccgaagcaaaaatgaacgaatgggattacatcaagttagaaaagcttctgaacagctacagaaacaatcaacaaagtgagaagacactccacagaatgggagaacatatttgcaaactacccatctgacaagggattcataaccagaatatataaggagctcaaacgactcaatagtaaaaaacctaataacctgatttttaaattggcaaaagatctgaatagacatgtttcaaaagataacacacaaatggcaaacaggtatatgaaaaggtgttcaacatcattgaccatcagataaaaggaaatcaaagctataatgagatatcctctcactccagttaaaatggctctcatccagaactaccactcaatccagcaatctcattgctgggtatatagaggaaaataaatctttctaccataaagacacatgcacacaaatgtccattgcagcactattcacaatagcaaagacatggaatcaacatgaatgcccatcaatgacagattggataaggaaaatgtggtacatatacaccatggaatactatgcagccat-aaaaaatgagatgatgtcatttgtgtgaatatggatgaagctggacactattgttattagaaaactaacacaggaacagaaaactgaatgccacatgttctcacttataagtggaagctaaatgataagaacttatgaacacaaaggaaaaacaacagacactggggtctacttgagggggagagggaaaggaaagagaggagcaaaaaagataactattaggtacttggcttaatacttgggtaatgaaataatatgtacagcaaaccgctgtgacatgtgtttacctatataaaaaaccttcacgtgaaaccccaaacct-aaaaaaaaggtaaataaatatacaaataaataaaattacttttatcaaaatacaggcaacgacaaatgctggcaaggatgtgaaggaaagggaaccctcatacactgttgatgggaatgtaaat---taatacaaccactataaaggatggtttaaagtttcctcgaaaaactaaaaatacagctactatctgatccaacaatcccatttctaggtatctacccaaaagaaagaaaattagtatattgaagagatatctccactcccatgtttattgtagcactattcacaatagccaaggtttgaagcaacctaagtgtccatcaacagatgaatagataaataaaatgtgatacatatacatgatgaagtactattcagccataaaaaataatgaactcctgtcattttcactaacatggatggaactagagg-tcat-tatgttaagtgaaataagccaggcacataaagac i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16949857 2235 + 48394510 agaatcaataaattcagtaatatttcaggttacaaaattaacatacaaaaaatcagtagcatttctatatgctagcggtgaacaatctgaaaaggatactgagaaagtaatccaattataatagctataagtaaaattaaatacctactaataaacttatgtgaaaaaagtaaaagttctctacaatgaaaaccataaaacattgattaaagaaattgaagaggacacaaaataatagaaagatattgcacgttcatgaattagaagattcaatattgttaaaatgttcatactatccaaagcaatctacagattcaatgcaatccctcaaaataccactaacatccttcacagcaatagagaagaaaaaaattccaaaatttacataaaaccacaaaaatcaagaacagccaaagctatcctaaacaaaaagaacaaaactggaggaatcacattacctgacttcaaattacaccacagagctatagtaaccaaaacagtatggtactggcattaaagcagacacatagaccaatggaaaagaatagagaacctggaaatgaatttatgtatctacagtgaactcattttca--aaaggtgtcaagaacatactttggggaatgacagtctcttcaatcaatgctgctgggaaaactggatatccatgtacagcacaatgaatctcaacccctatctctcatcatatacaaaaatcaaataaaaatgggttaaataaaaatgggttaaaaatttaaatctaaagaaactagtaaaagacttcaatcttatacttgcaaactactataagaagcatggggaaaactcttcaggacattggtctgggcaaaattttcttgagtaataccacacaagcacaggaaaccaaaacaaaaatgaacgaatgggattacatcaagttagaaaagcttctgaacagcaacagaaacaatcaacaaagtgagaagacactccacagaatgggagaaaatatttgcaaactacccatctgacaagggattcataaccagaatatataaggagctcaaacaactcaatagtaaaaaacctaataacctgattattaaacgggcaaaagatctgaatagacatgtttcaaaagataacacacaaatggcaaacaggtatatgaaaaggtgttcagcatcattgatcatcagataaaaggaaatcaaagctataatgagatatcctctcactccggttaaaatggctgtcatccagaactaccactcaatccagcaatctcattgctgggtatatagaggaaaataaatctttctaccataaagacacatgcacaccaatgtccactgcagcactattcacaatagcaaagacatggaatcaacatgaatgcccatcaatgacagattggataaggaaaatgtggtacatatacaccatggaatactatgcagccat-aaaacatgagatgatgtcatttgtgtgaacatggatgaaactgggcactattattattagaaaactaacacaggaacagaaaactgaatgccacatgttctcacttataagtggaagctaaacgataagaacttatgaacacaaaggaaaaacaacagatgctggggtctacttgagggggagagggaaaggaaagagaggagcaaaaaagataactattaggtacttggcttaatacttaggtaatgaaataatatgtacaacaaacccctgtgacatgtgtttacctatataaaaaaccttcacttgtacccccaaacctaaaataaaaggtaaataaatatataaataaataaaattacttttatcaaaatataggcaacaacaaatgctggcaaggatgtgaaggaaagggaaccgtcatacactgttgatgggaatgtaaat---tagtacaaccactataaaggatggcttaaagtttcctcaaaaaactaaaaataga---actatctgatccaacaatcccatttctaggtatctacccaaaagaaagaaaactagtatattgaagagctatctccactcccatgtttattgtagcactattcacaatagccaaggtttgaagcaacctaagtgtccatcaacagatgaatagataaagaaaatgtgatacatatacatgatgaagtactattcagccgtaaaaaataatgaactcctgtcattttcactaatgtggatggaactagaggctcatgtatgttaagtgaaataagccaggcacataaagac i ponAbe2.chr21 C 0 I 4747 s nomLeu3.chr25 4452180 2213 + 32716333 agaatcaataaattcagtaatatttcaggttacaaaattaacatacaaaaaatcagtagcatttctacatgccagcagtgaacaatctgaaaaggatatcaagaaagtaatccaattataatagctataagtaaaattaaatacctactaataaacttaagtgaaaaaagtaaaagttctcaacaatgaaaactataaaacattgattaaagaaattgaagaggacacaaaataatagaaagatattgcacgttcatgaattagaagactcaatattgttaaaatgttcatactatccaaagcaatctacagattcaatgcaatccctcaaaataccagtaacatccttcacagcaatagagaag-aaaaaattccaaaatttacatagaaccacaaaaatcaagaagagccaaaactaccctactcaaaaagaacaaaactggatgaatcacattacctgacttcaaattacaccacagagctatagtaaccaaaacagtatggtactggcattaaagc--------agaccaatggaaaagaatagagaacccagaaatgaatttatatatctacagtggactcattttcaacaaaggtgtcaagaacatactttgaggaatgacagtctcttcaatcaatgctgctgggaaaactggatatccatatacagcacaatcaatctcgacccctatctctcatcatatacaaaaatc---------------aaataaaaatgggttaaaattttaaatctaaagaaactagtaaaagacttaaatcttatacttgcaaactactataagaagcatggggaaaactctttaggacattggtctgggcaaagttttcttgagtaataccacacaagcacaggaaaacaaagcaaaaatgaacgaatgggattacatcaagttagaaaagcttctgaacagctacagagacaatcaacaaagtgagaagacacgccacagaatgggagaaaatatttgcaaactacccatctgacaagggattcataaccagaatatataaggagctcaaacaactcaatagtaaaaaacctaataacctgatttttaaatgggcaaaagatctgaatagacatgtttcaaaagataacacacaaatggcaaacaggtatatgaaaaggtattcagcatcattgatcatcagataaaaggaaatcaaagctataatgagatatcctctcactccagttaaaatggctttCCTCcagaactactactcaatccagcaatctcattgctgggtatatagaggaaaataaatctttctaccataaagacacatgcacacaaatgtccactgcagcactattcacaatagcaaagacatggaatcaacataaatgcccatcaatgacagaatggataaggaaaatgtggtacatatacaccatggaatactatgcagccat-aaaaaatgagatgatatcatttgtgtgaacataaatgaagctggatgctattattattagaaaactaacacaggaacagaaaactgaatgccacatgttctcacttataagtggaagctaaatgataagaacttacgaacacaaaggaaaaacaacagacactggggtctacttgagggggagaggcaaaggaaagaggggagcaaaaaagataactattaggtacttggcttaatacttgggtaatgaaataatatgtacaacaaacccctgtgacatacgtttacctatataaaaaaccttcacgtgtacccccaaacctaaaataaaaggtaaataaaTATATAAATAAAtaaaattacttttatcaaaatacaggcaacaacaaatgctggcaaggatgtgaaggaaagggaaccctcatacactgttgatgggaatgtaaat---tagtacaaccattacaaaggatggtttaaagtttcctcaaaaaactaaaaatagaaccactgtctgatcc-acaatcccatttctaggtatctacccaaaagaaagaaaatgagtaaattgaagagatatctgcactcccatgtttattgtagcactattcacaatagccaaggtttgaagcaacctaagtgtccatcaacagataaatagataaagaaaatgtgatacatatacatgataaagtactattcagccataaaaaataatgaactcctgtcattttcactaacatggatggaactagagg-tcat-tatgttaagtgaaataagccaggcacataaagac i nomLeu3.chr25 I 259 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I e rheMac3.chr3 168567017 5439 - 198365852 I e chlSab2.chr2 15015777 5418 - 90373283 I e macFas5.chr3 162230803 5407 - 192294377 I e papAnu2.chr3 150914777 12377 - 180432695 I a score=21185.000000 s hg38.chr21_KI270874v1_alt 81028 79 + 166743 aaactttgcatgttctcacttattaatgtgagttaaaaattaagacgatggaactcatgaagatagagagtagaaatat s panTro4.chr21 3693844 79 + 32799110 aaactttgcatgttctcacttattaatgtgagttaaaaattaaaacgatggaactcatgaagatagagagtagaaatat i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4454393 79 + 32716333 aaactttgcatgttctcacttattagtgtgagttaaaaattaaaacgatgggactcatgaagatagagagtagaagtat i nomLeu3.chr25 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I e rheMac3.chr3 168567017 5439 - 198365852 I e ponAbe2.chr21 16952092 4747 + 48394510 I e chlSab2.chr2 15015777 5418 - 90373283 I e macFas5.chr3 162230803 5407 - 192294377 I e papAnu2.chr3 150914777 12377 - 180432695 I a score=1016034.000000 s hg38.chr21_KI270874v1_alt 81107 1924 + 166743 ggttaccagaggttaggaagggcaggaggggagtggggcaaaagtggggatggttaataggtatgaaaatatagttagatacactgaataatatctagtatttgatagcacaacagggtgactacagtcatcaataacttattgtacatttcaaaataactaaaagagtataattggattgtttgttacataaggaaaggataaatgcttccagtgatttataccccatttaccctcatgtgattattatgtacaacatgcctgtatcaaaatatctcatgtaccccataaatatatgtacctactatgtacccacaaaaaatattttaaaataatagaAAATTTTAAAATTAgttgcttaaagcaccagaaattaatcatctcacagttctataaatcagaaatgatag-ttttggcaaagttagttacttctggaggctctgaaggaaaatctgtttcatgtctctctcctagcttctggtgactatcaaagtaattggccatttcttgacctgtagacacattatttcaattgctgcctgtatctttacatggcctttccctctgtgggttctcttttgtatctgtgtgtctcaaacctgccttccttttccctcttataagggcaccagtaactgaatttaaggcctaatccagaatgatctcatcctaaggtccttagttatgtctgcaaaaaccctatttccaaataagttcacattcacaaatactagagattaggtatcatgcatatctttttgaggaacaccattcaaccACTGTAgcctgccctcagccccctaaaatttacatctgtcctaaatggaaaatggggaatcacaccattccagcatcactcaaagttttccaattacagcatcaactctaaatccaaaatcttatctaaaagtcatctgctcaaaaagtcccaaatctaatattttaattatctaaatcaggtattggcaagactctccatatgatccatcttgggggaaaattcctcaccatctgtggacctataaaactataaaacgagttgtctgcttccaaaatacaaaggtgggataagcatagaaaaaacattctcattccaaaggagaaaactggaagaaataaaggggtcgctggtctccagtaagtttgaagccctacaggaaaaattctgttaggtttcaaaacctgagaaaattctccatagctcaaagctctgtccactgggcccatgaaggctctcctctccggacttaaacagaacccatcctctgctcccaggaaggctc-gttggccactgcctctgcattcaaaatactgccctcagaattattactcttttttattgtaaaggggcacatatttgcaggcaaattactctattatcctttttctgcttgtagaattttgggagttcagaaacattcttttattttatccaattcctttcagccaaaactgttagaatttctcttggtataacattctcaaaaatgttgtgagtctcctttgtaattcatagggttccacatgattagacaagaggatactcaacagatccttccttgaacacttcatctctattgctggattctcctgagacattttattggctccataagt--cacacccaatctcttcaggaaaaggttgtccagccacacatttggccctgtccccagagaatgcttttctagcagcaaattttctaactttggcatcctttacaatgtgaatagaccaagaactgtccaaattatcaagtgctcattgcttttttgcatgagttccttcttccatttatctttttcctctggaattgtactataagctgcaacttcaacactttgcttggaaatttcctcagctaaatatccaagtttattgcttacaagttcccctctctcccaacagtagaccacaattcaaaca s panTro4.chr21 3693923 1923 + 32799110 ggttaccagaggttaggaagggcaggaggggagtggggcaaaagtggggatggttaataggtatgaaaatatagttagatacactgaataatatctagtatttgatagcacaacagggtgactacagtcatcaataacctattgtacatttcaaaataactaaaagagtataattggattgtttgttacataaggaaaggataaatgcttccagtgatttataccccatttaccctcatgtgattattatgtacaacatgcctgtatcaaaatatctcatgtaccccataaatatatgtacctactatgtacccacaaaaaatattttaaaataatagaAAATTTTaaaattagttgcttaaagcaccacaaattaatcatctcacagttctataaatcagaaatgatgg-ttttggcaaagttagttacttctggaggctctgaaggaaaatttgtttcatgtctctctcctagcttctggtgactatcaaagtaattggccatttcttgacctgcagacacattatttcaattgctgcctgtatctttacatggcctttccctctgtgggttctcttttgtatctgtgtgtctcaaacctgccttccttttccctcttataagggcacaagtaactgaatttaaggcctaatccagaatgatctcatcctaaggtccttagttatgtctgcaaaaaccctatttccaaataagttcacattcacaaatactagaggttaggtatcatgcatatctttttgaggaacaccattcaaccACTATAgcctgccctcagccccctaaaatttacatctgtcctaaatggaaaatggggaatcacaccattccagcatcactcaaagatttccaattacagcatcaactttaaatccaaaatcttatctaaaagtcatctgctcaaaaagtcccaaatctaatattttaattatctaaatcaggtattggcaagactctccatatgatccatcttgggggaaaattcctcaccatctgtggaccta-aaaactataaaacaagttgtctgcttccaaaatacaaaggtgggataagcatagaaaaaacattctcattccaaaggagaaaactggaagaaataaaggggtctctggtctccagtaagtttgaagcactacaggaaaaattctgttaggtttcaaaacctgagaaaattctccatagctcaaagctctgtccactgggcccatgaaggctcccctctccggacttaaatagaatccatcctctgctcccaggaaggctc-gttggccactgcctctgcattcaaaatactgccctcagaattattactcttttttattgtaaaggggtatatgtttgcaggcaaattactctattatcctttttctgcttgtagaattttgggagttcagaaacattcttttattttatccaattcctttcagcaaaaactgttagaatttctcttggtataacattctcaaaaatattgtgagtctcctttgtaattcatagggttccacatgattagacaagaggatactcaacagatccttccttgaacacttcatctctattgctggattctcctgagacattttattggctccataagt--cacacccaatctcttcagtaaaaggttgtccagccacacatttggccctgtccccagagaatgcttttctagcagcaaattttctaactttggcatcatttacaatgtgaatagaccaagaactgtccaaattatcaagtgctttttgcttttttgcatgagttccttcttccatttatctttttcctctggaattgtactataagctgcaacttcaacactttgcttggaaatttcctcagctaaatatccaagtttattgcttacaagttcccctctctcccaacagtagatcacaattcaaaca i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16956839 1926 + 48394510 ggttaccagaggctgggaaggccaggaggggagtggggcaaaagtgcagatggttaataggtatgaaaatatagttagatacactgaataatatctagtatttgatagcacaacagggtgactacagtcatcaataacttattgtacatttcaaaataactaaaagagtataattggattgtttgttacataaggaaaggataaatgcttccagtgatttataccccatttaccctcatgtgattattatgtaccacatgcctgtatcaaaatatctcatgtaccccataaatatatgtacctactatgtacccacaaaaaATATTTTTAAATAATAGAAAATTTTaaaattagttgcttaaagcaccagaaattaatcatctcacagttctataaatcagaaatgatggtttttggcaaggttagttacttctggaggctctgaaggaaaatctgtttcatgtctctctcctagcttctggagactatcaaagtaattggccatttcttgacctgtagacacattatttcaattgctgcctgtatttttacacagccttcccctctgtgggttctcttttgtatctgtgtgtctcaaatcttccttccttttccctcttataagggcaccagtaactgaatttaaggcctaatccagaatgatctcatcctaaggtccttagttatgtctgcaaaaaccctatttccaaataagttcacattcacaaatactagaggttaggtatcatgcatatctttttgaggaacaccattcaatcACTGTAgcctgccctaagccccctaaaatttacatctgtcctaaatggaaaatggggaatcacaccattccagcatcactcaaagttttccaattacagcatcaactctaaatctaaaatcttatctaaaattcatctgctcaaaaagtcccaaatctaatattttaattatctaaatcaggtattggcaagactctccatatgatccatcttgggggaaaattcctcaccatctgtggacctataaaactataaaacaagttgtctgcttccaaaatacaaaggtgggataagcatagaaaaaacattctcgttccaaaggagaaaactggaagaaataaaggggtcactggtctccagtaagtttgaagccctacgggaaaaa--ctgttaggtttcaaaacctgagaaaattctccatagctcaaagctctgtccactgggcccacgaaagctctcctctccggacttaaagagaatccatcctctgctcccaggaaggctctgttggccactgcctctgcattcaaaatactgccctcagaattattactcttttttattgaaaaggggcacatgtttgcaggcaaattactctattatcctttttctgcttgtagaattttgggagttcagaaacattcttttattttatccaatttctttcagccaaaactgttagaatttctgttggtataacattctcaaaaatgttgtgagtctcctttgtaattcacaggggtccacatgattagacaagaggatactcaacagattcttccttgaacacttcatctctattgctgaattctcctaagacattttattggctccataagtcacacacccaatctcttcagtaaaaggttgtccagccacacatttggccctgtccccagagaatgcttttctagcagcaaattttctaactttggcatcctttacaatgtgaatagaccaagaactgtccaaattatcaagtgctggttgctttcttgcatgagttccttcttccatttatctttttcctctggaattgtactataagctgcaacttcaacactttgcttggaaatttcctcagctaaatatccaagtttattgcttacaagttctcctctctcccaacagtagatcacaattcaaaca i ponAbe2.chr21 I 4747 C 0 s nomLeu3.chr25 4454472 1917 + 32716333 ggttatcagaggctgggaagggcaggaggggagtggggcaaaa--ggggatggttaataggtatgaaaatatagttagatacactgaataatatctagtatttgatagcataacagggtgattacagtcatcaataacttattgtacatttccaaataactaaaagagtataattggattgtttgttacctaaggaaaggataaatgcttccagtcatttataccccatttaccctcatgtgattattatgtaccacatgcctgtatcaaaatatctcatgtaccccataaatatatgtacctactatgtacccacaaaaaatattttaaaaaAATAGAAAATTTTAAAATTAgttgcttaaagcaccagaaattaatcatctcacagttctataaatcagaaatgatgg-ttttggcaaggttagttacttctggaggctctgaaggaaaatgtgtttcatg----tctcctagcttctggtgactatcaaagtaattggccatttcttgacctgtagacacgttatttcaattgctgcctgtatctttacatggccttcccctctgtgggttctcttttgtatctctgtgtctcaaaccttccttccttttccctcttataagggcaccagtaactgaatttaaggcctaatccagaatgatctcatcctaaggtccttagttatgtctgcaaaaaccctatttctaagtaagttcacattcacaaatactagaggttaggtatcatgcatatctttttgaggaacaccattcaaccACTGTAgcctgccctcagccccctaaaatttacatctgtcccaaatggaaaatggggaatcacaccattccagcatcattcatagttttccaattacagcatcaactctaactccaaaatcttacctaaaagtcttctgctcaaaaagtcccaaatctaatattttaattatctaaatcaggtattggcaagactcttcatatgagccgtcttgggggaaaattcctcaccatctgtggatctataaaacgataaaacaagctgtctgcttccaaaatacaaaggtgggataagcatagaaaaaacattctcattccaaaggggaaaactggaagaaataaaggggtcgctgttctccggaaagtttgaagccctacaggaaaaattctcttaggtttcaaaacctgagaaaattctccatagctcaaagctctgtcccctgggcccatgaaggctctcctctccggacttacagagaatccatcctctgctcccaggaaggctctgttggccactgcctctgcattcaaaatactgccctcagaatta-tactctttcttattgaaaatgggcacatgtttgcaggcaaattactctattatcttttttctgcttgtataattttgggagttcagaaacactctttgattttatccaatttctttcagccaaaactgttagaatttctgttggtataacattctcaaaaatgttgtgagtctcctttgtaattcataggggtccacatgattagacaaaaggatactcaatagatccttccttgaacacttcacctctgttgctggattatcctaagacattttattggctccatgagtcacacacccaatctcttcagtagaaggttgtccagccacacgtttggccctgtctccagagaatgcttttctagcagcaaattttctaactttggcatgctttacaatgtgaatagaccaagaactgtccaaataatcaagtgctggttgctttcttgcatgagttccttcttccatttatctttttcctctggaattgtactataagctgcaacttcaacactttgcttggaaaattcctcagctaaatatccaagtttattgcttaccagtt---ctctctccctacagtagatcacaattcaaaca i nomLeu3.chr25 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I e rheMac3.chr3 168567017 5439 - 198365852 I e chlSab2.chr2 15015777 5418 - 90373283 I e macFas5.chr3 162230803 5407 - 192294377 I e papAnu2.chr3 150914777 12377 - 180432695 I a score=2886773.000000 s hg38.chr21_KI270874v1_alt 83031 1213 + 166743 agttttctgccattttgtaataagaatcacctttcttccagtttccaataaaatgctcctcatttcttcctgagatctcactagaaatacctttaatattcacatttctatcaaccatgtcttcaaggcaatttaggctttttctattatacacctaaaaattctttcagccacttgcacatt-tttaggtatttcttacagcagatcccactctcagtaccaaaTCTGTATCAGTCAGGATTCCATCAG-AAAAACAGAACCAGTGGGATGTTCACGGTatgtgacacatccccattatgaagggtaatcttctttatgtaaagtcagttgTCTTCTgccaggcagtgttgctcatgcctgtaaccccagcactttgggaggctgaggcaagaggatttcttgaggctaggagttagagaccagcctgggcaacatagtgagccccttctcaaaaaaaaaaaaaaaaagaattgattagttgagtgtggtagtatgcccctgtagtcccagctacttgggaggctgaggtgaaaagatggcttgagctcaagagttcaaggctgcagtgagctatgattgcaccactgcactccagcctgggcaacacactgatatcctgtttAGTGTGAGATCCTCT--------AAACGAACAAACAAACAAAACACAGAGTTTATTGCctcatagaagcagagagtagaatagtggttaccacaggctgaggtgaaagagaaattggggtgatgttggtcaaggatacaatattttagt----taggaggaataagttcaagagatctattgtactgtacaacctggtgactatagctaataataatgcattgtatacttaaaaattgttaaaagagtatattttaagtgtgctcatcacaagtaaatgatatgttcatgaagcaatgtatatgttaattatcttgatttagccattctacaatgtatacacatttcaaaacatcatattgtgcaccataagtatgtacaa-tttttTGAGTCAAATGGGCAAATAAGTAAGTTTTTTTTAATGTCCACATAAAGATGGGCCGTATGAAAATAGTTTGTTATATAATAGATG---CTCCCCAAAGTTCCAGATCTCCAGAAAAGAAATAAATGGCATATTGCATGAGACTAATAAAATTTAAAACGGTCCAAAGAAAGATGGCAATTTAATAGATAGAAACCATAACAAc-aggcactgagctagaca s panTro4.chr21 3695846 1213 + 32799110 agttttctgccattttgtaataagaatcacctttcttccagtttccaataaaatgctcctcatttcttcctgagatctcactagaaatacctttaatattcacatttctatcaaccatgtcttcaaggcaatttaggctttttctattatacacctaaaaattctttcagccacttgcacatt-tttaggtatttgttacagcagatcccactctcagtaccaaaTCtgtatcagtcaggattccatcag-aaaaacagaaccagtgggatgtTCATGGTatgtgacacatccccattatgaagggtaatcttctttatgttaagtcaattgTCTTCTgccaggcagtgttgctcatgcctgtaaccccagcactttgggaggcagaggcaagaggatctcttgaggctaggagttacagaccagcctgggcaacatagtgagccccttctcaaaaaaaaaaaaaaaaggaattgattagttgagtgtggtagtatgcccctgtagtcccagctacttgggaggctgaggggaaaagatggcttgagctcaagagttcaaggctgcagtgagctatgattgcaccactgcactccagcctgggcaacacactgatattctgtttAGTGTGAGATCCTCT--------AAACAAACAAACAAACAAAACACAGAGTTTATTGCctcatagaagcagagagtagaatagtggttaccacaggctgaggtgaaagagaaattggggtgatgttggtcaaggatacaatattttagt----taggaggaataagttcaagagatctattgtattgtacaacctggtgactatagctaataataatgcattgtatacttaaaaattgttaaaagagtatattttaagtatgctcatcacaagtaaatgatatgttcatgaagcaatgtatatgttaattatcttgatttagccattctacaatgtatacacatttcaaaacatcatattgtgcaccataagtatgtacaa-tttttTGAGTCAAATGGGCAAATAAGTAAGTTTTTTTTAATGTCCACATAAAGATGGGCCATATGAAAATAGTTTGTTATATAATAGATG---CTCCCCAAAGTTCCCGATCTCCAGAAAAGAAATAAATGGCATATTGCATGAGACTAATAAAATTTAAAACGGTCCAAAGAAAGATGGCAATTTAATAGATAGAAACCATAACAAc-aggcactgagctagaca i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16958765 1205 + 48394510 agttttctgcaattttgtaacaggaatcacctttcttccagtttccaataaaatgctcctcatttcttcctgagatctcactagaaatacctttaatattcacatttctatcaaccatgtcttcaaggcaatttaggttttttctattatgcacctaaaaattctttcagccacttgcacatt-tttaggcatttgttacagcagatcccactctcagtaccaaaTCtgtatcagtcaggattccatcag-aaaaatagaaccagtgggatgtTCATGGTatgtgacacatccccattatgaagggtaatcttctttatgtaaagtcaattgTCTTCTgccaggcactgttgcccatgcctgtaaccccagcactttgggaggctgaggcaagaggatctcttgaggctaggatttagagaccagcctaggcaacatagtgagccccttctcaaaaaaaaaaaaaaaa-gaattgattagttgagtgtggtagtatgcccctgtagtcccagctacttgtgaggctgaggtgagaagacggcttgagctcaagagttcaaggctgcagtgagctatgattgcaccactgcactccagcctgggcaacacactgatatcctgtttAGAGTGAGATCCTCT--------AAACAAACAAACAAACAAAACACAGAGTTTATTGCctcatagaagcagagagtagaatagtggttaccacaggctgaggtgaaagagaaattggggtgatgttggtcaaggatacaatattttagttagataggaggaataagttcgagagatctattgtactatacaacctggtgactacagctaataataatgcattgtatacttaaaaattgttaaaagagtagattttacgtgtgctcatcacaagtaaatgatatgttcatgaagcaatgtatatgttaattatcttgatttagccattctacaatgtatacacatttcaaaacatcatattgtgcac---aagtatgtacaa-tttttTGAGTTAAATGGGCAAA----TAAGTTTTTTTAAATGTCCACATAAAGATGGGCCATATGAAAATAGTTTGTTACATAATAGATG---CTCCCCAAAGTTCCAGATCTCCAGGAAAGAAATAAATGGCATATTGCATGAGACTAATAAAATTTAAAACAGTCCAAAGAAAGATGGCAATTTA----ATAGAAACCATAACAAC-AGGCACTGAGCTAGACA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4456389 1201 + 32716333 agttttctgccattttgtaacaagaatcacc-ttcttccagtttccaataaaatg---ctcatttcttcctgagatctcactagaaatacctttaatattcacatttctatcaaccatgtcttcaaggcaatttaggctttttctattatgcacct-aaaattctttcagccacttgcacatt-tttaggtatttgttacagcagaccccactctcagtaccaaaTCTGTATCAGTCAGGATTCCATCAG-AAAAACAGAACCGGTGGGATGTTCATGGTatgtgacacatccccattatgaagggtaatcttctttatgtaaagtcaattgTCTTCTgccaggcactgttgctcatgcctgtaaccccagcactttgggaggctgaggcacgagggtctcttgaggctaggagttagagaccagcctgggcaacataatgagccccttctcaaaaaaaaaa-------gaattgattagttgagtgtggtagtatgcccctgtagtcccagctacttgggaggctgaggtgagaagatggcttgagctcaagagttcaaggctgcagtgagctatgattgaaccactacactccagcctgggcaatgcactgatatcctgtttAGAGTGAGATCCTCT--------AAACAAACAAACAAACAAAACACAGAGTTTATTGCcttatagaagcagagagtagaatagtggttaccacaggctgaggtgaaaaagaaattggggtgatgttggtcaaggatacaatatattaga----taggaggaataagttcaagagatctattgtactgtacaacatggtgactatagctaataataatgcattgtacacttaaaaattgttaaaagagtagattttaagtgtgctcatcacaagtaaatgatatattcatgaagcaatgtatatgttaattatcttgatttagccattctacaatgtatacacatttcaaaacatcatattgtgcgccataagtatgtacaa-tttttTGAGTTAAATGGGCAAATAAGTAAGTTTTTTTAAATGTCCACATAAAGATGGGCCATATGAAAATAGTTTGTTATATAATAGATG---CTCTCCAAAGTTCCAGATCTCCAGAAAAGAAATAAATGGCATATTGCATGAGACTAATAAAATTTAAAACAGTCCAAAGAAAGATGGCAATTTAATAGATAGAAATCATAACAAC-AGGCACTGAGCTAGACA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168572456 1216 - 198365852 agttttctaccattttgtaacaagaatcacctttcttccagtttccaataaaatgctcctcattccttcctgagatctcactagaaatacctttaatattcacatttctatcaatcatgtcttcaaggcaatttaggctttttctattatgcacctaaaaattcttccagccacttccacattgttcagatatttgttacagcagattccactctcagtaccaaaTCTGTATCAGTCAGGATTCCATCAG-AAAAACCGAACCAGTGGGATGTTCATGGTatgtgacacttccccattatgaaaggtaatcttctttatgtaaagtcagttgTCTGCTGGcaggcacagttgctcatgcctgtaaccccagcactttgggaggctgaggcaagaggacctcttgaggctaggagttagagaccagcctggacaatgtagagagccccttctcaacaacaaaagaaaaa-taattgagtagttgagtgtggtagtatgtccctgtagtcccagctacttgggaggctgaggtgagaagacggcttgagctcaagagttcaaggctgcagtgtgctatgattgcaccactgcactccagcctgggcaacacactgataccctgtttAGAGTGAGATCCTGT----aaacaaacaaacaaacaaacaGAACACGGAGTTTATTGCAtcatagaagcagagagtagaatagtgattaccacaggctgggatgaaagagaaattggggtgacgttggtcaaggatacaaaattttagt----taggaggaacaagttcaagagatctattgtactgtacaacatggtgactatagctaataataatgcattgtatacttaaaaattgtttaaaaattagattttaagtgttctcatcacaagtaaatgatatgttcatgaagcaatgtatatgttaattatcttgatttagccattctacaatgtatacacatttcaaaacatcatactgtgtaccataagtatgcacaatttttTTGAGTTAAATAGGCAAATAAG-----TTTTTTAAATGTCCATGTAAAGATGGGTCGTATGAAAAGAGTTTGTTATATAATAGATGCCCCCCCCCAAAGTTCCAGATCTCCAGAAAGGAAATAAATGGCATATTGCATGAGACTAATAAAATTTAAAACAGTCCAAAGAAAGATGGCAATTTAGTAGATAGAAACCATAACAAC-AGGCACTGAGCTAGACA i rheMac3.chr3 I 5439 C 0 s macFas5.chr3 162236210 1216 - 192294377 agttttctaccattttgtaacaagaatcacctttcttccagtttccaataaaatgctcctcattccttcctgagatctcactagaaatacctttaatattcacatttctatcaatcatgtcttcaaggcaatttaggctttttctattatgcacctaaaaattcttccagccacttccacattgttcagatatttgttacagcagattccactctcagtaccaaaTCTGTATCAGTCAGGATTCCATCAGAAAAAACCGAACCAGTGGGATGTTCATGGTatgtgacacttccccattatgaaaggtaatcttctttatgtaaagtcagttgTCTGCTGGcaggcacagttgctcatgcctgtaaccccagcactttgggaggctgaggcaagaggacctcttgaggctaggagttagagaccagcctggacaatgtagagagccccttctcaacaacaaaagaaaaa-taattgagtagttgagtgtggtagtatgtccctgtagtcccagctacttgggaggctgaggtgagaagacggcttgagctcaagagttcaaggctgcagtgtgctatgattacaccactgcactccagtctgggcaacacactgataccctgtttAGAGTGAGATCCTGT----aaacaaacaaacaaacaaacagaacaCGGAGTTTATTGCAtcatagaagcagagagtagaatagtgattaccacaggctgggatgaaagagaaattggggtgacgttggtcaaggatacaaaattttagt----taggaggaacaagttcaagagatctattgtactgtacaacatggtgactatagctaataataatgcattgtatacttaaaaattgtttaaaaattagattttaagtgttctcatcacaagtaaatgatatgttcatgaagcaatgtatatgttaattatcttgatttagccattctacaatgtatacacatttcaaaacatcatactgtgtaccataagtatgcacaatttttTTGAGTTAAATAGGCAAATAAG-----TTTTTTAAATGTCCATGTAAAGATGGGTCGTATGAAAAGAGTTTGTTATATAATAGATG-CCCCCCCCAAAGTTCCAGATCTCCAGAAAGGAAATAAATGGCATATTGCATGAGACTAATAAAATTTAAAACAGTCCAAAGAAAGATGGCAATTTAGTAGATAGAAACCATAACAAC-AGGCACTGAGCTAGACA i macFas5.chr3 I 5407 C 0 s papAnu2.chr3 150927154 1217 - 180432695 agttttctaCCATTTTGtaacaagaatcacctttctTCCAGTTTCCAATAAAATGCTCCTCATTCCTTCCTGAGATCTCACTAGAAATACCTTTAATATTCACATTTCTATCAATCATGTCTTCAAGGCAATTTAGGCTTTTTCTATTATGCACCTAAAAATTCTTCCAGCCACTTCCACATTGTTCAGATATTTGTTACAGCAGATTCCACTCTCAGTACCAaatctgtatcagtcaggattcCATCAG-AAAAACCGAACCGGTGGGATGTTCATGGTATGTGACACTTCCCCATTATGAAAGGTAATCTTCTTTATGTAAAGTCAGTTGTCTGCTggcaggcacagttgctcatgcctgtaaccccagcactttgggaggctgaggcaagaggacctcttgaggctaggagttagagaccagcctgggcaatgtagagagCCCCTtctcaacaacaaaagaaaaa-taattgagtaGTTGAGTGTGGTAgtatgtccctgtagtcccagctacttgggaggctgaggtgagaagacgGCTTGAGCTcgagagttcaaggctgcagtgtgctatgattgcaccactgcactccagcctgggcaacacactgaTACCCTGTTTAGAGTGAGAtcctgtaaacaaacaaacaaacaaacaaacagaacacgGAGTTTATTGcatcatagaagcagagagtagaatagtgattaccaCAGGCTGGGATGAAAGAGAAATTGGGGTGACGTTGGTCaaggatacaaaattttagt----taggcggaacaagttcaagagatctattgtactgtacaacatggtgactatagctaataataatgcattgtatacttaaaaattgttaaaaaattagattttaagtgttctcatcacaagtAAATGACATGTTCATGAAGCAATGTatatgttaattatcttgatttagccattctacaatgtatacacatttcaaaacatcataCTGTGTACCATAAGTATGCACAAtttttttGAGTTAAATAGgcaaataag-----ttttttaaatgtccatgtaAAGATGGGTCGTATGAAAAGAGTTTGTTATATAATAGATG---CCCCCCAAAGTTCCAGATCTccagaaaggaaataaatggcaTATTGCATGAgactaataaaatttaaaacagtccAAAGAAAGATGGCAATTTAGTAGATAGAAACCATAACAAC-AGGCACTGAGCTAGACA i papAnu2.chr3 I 12377 C 0 s chlSab2.chr2 15021195 1210 - 90373283 agttttctaccattttgtaacaagaatcacctttcttccagtttccaaaaaaatgctcctcattccttcctgagatctcactagaaatacctttaatattcacatttctatcaatcatgtcttcaaggcaatttaggctttttctattatgcacctaaaaattcttccagccacttccacattgttcagatatttgttacagcagattccactctcagtaccaaaTCTGTATCTGTCAGGATTCCATCAG-AAAAACCGAACCAGTGGGATGTTCATGGTATGTGACACTTCCCTATTATGAAAGGTAATCTTCTTTATGTAAAGTCAGTTGTCTGCTGGcaggcacagttgctcatgcctataaccccagcactttgggaggctgaggcaagaggacctcttgaggctaggagttagagaccagcctgggcaatgtagagagcctcttctcaacaacaaaagaaaaa-taattgagtagttgagtgtggtagtatgtccctgtagtcccagctacttgggaggctgaggtgagaagacggcttgagctcaagagttcaaggctgcagtgcgctatgattgcaccactgcactccagcctgggcaacacactgataccctgtttAGAGTGAGATCCTGT--------aaacaaacaaacaaacagaacaCGGAGTTTATTGCAtcatagaagcagagagtagaatagtgattaccacaggctgggatgaaagagaaattggggtgacgttggtcaaggatacaaaattttagt----taggaggaacaagttcaagagatctattgtactgtacaacatggtgactatagctaataataatgcattgtatacttaaaaattgttaaaaaattagattttaagtgttctcatcacaagtaaatgatatgttcatgaagcaatgtatatgttaattatcttgatttagccattctacaatgtatacgcatttcaaaacatcatactgtgtaccataagtatgcacaatttttTTGAGTTAAATAGGCAAATAAG-----TTTTTTAAATGTCCATGTAAAGATGGGTCGTATGAAAAGAGTTTGTTATATAATAGATG---CACCCCAAAGTTCCAGATCTCCAGAAAGGAAATAAATGGCATATTGCATGAGACTAATAAAATTTAAAACAGTCCAAAGAAAGATGGCAATTTAGTAGATAGAAACCATAACAACAAGGCACTGAGCTAGACA i chlSab2.chr2 I 5418 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I a score=316166.000000 s hg38.chr21_KI270874v1_alt 84244 247 + 166743 cttccttaatactaatacacaagataagaattatttccattttataaatggggaagtcatggttcagctgtatgaagtcaatcgctactaataaaagtcaacatttaaatatgtgctacttgaaatctaccctatatcaaagtccatgcattctccactgctcccagtggcctctttTAGAAATGCTCATAATGTTTATGAGAATGGACAGATAGTGCACGCAAAAGGAAATCTCTTCCTTGCACCC s panTro4.chr21 3697059 247 + 32799110 cttccttaatactaatacacaagataagaattatttccattttataaatggggaagtcatggttcagctgtatgaagtcaatcgctactaataaaagtcaacatttaaacatgtgctacttgaaatctaccctatatcaaagtccatgcattctccactgctcccagtggcctctttTAGAAATGCTCATAATGTTTATGAGAATGGACAGATAGTGCACACAAAAGGAAATCTCTTCCTTGCACCC i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16959970 244 + 48394510 CTTCCTTAATACTAATACAGAAGATAAGAattatttccattttataaatggagaagtcatggttcagctatatgaagtcaatcgctactaataaaagtcaacatttaaacatgtgctacttgaaatctactctatgtcaaagtccatgcattctccacttctcccagtggcctctttTAGAAATGCTC---ATGTTTATGAGAATGGACAGATAGTGCACACAAAAGGAAATCTCTTCCTTGCACCC i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4457590 243 + 32716333 GTTCCTTAATACTAATACAGAA-ATAAGAattatttccattttataaatggggaagtcacggttcagctatatgaagtcaatcgctactaataaaagtcaacatttaaacatgtgctacttgaaatctactctatatcaaagtccatgcattctccactgctcccagtggcctctttTAGAAATGCTC---ATGTTTATGAGAAGGGACAGATAGTGCACACAAAAGGAAATCTCTTCCTTGCACCC i nomLeu3.chr25 C 0 C 0 s papAnu2.chr3 150928371 244 - 180432695 CTTCCTTAATACTAATACAGAa---aagaattatttccattttacaaatggggaagtCATGGTTCAACTGTATGAAGTCAATCGCTGCTAATAAAAGTCAACGTTTAAACATGTGCTACTTGAAATCTACTCTATATCAAAGTCCATGCATTCTCCACTGCTCCCAGTGGCCTCTTTTAGAAATGCTCATAATGTTTATGGGAATGGACAGACAGTGTATacaaaaggaaatctcttccttGTACCC i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15022405 247 - 90373283 CTTCCTTAATACTAATACAGAAGAGAAGAATTATTTCCATTTTACAAATGGGGAAGTCATGGTTCAACTGTATGAAGTCAATCGCTGCTAATAAAAGTCAACGTTTAAACATGTGCTACTTGAAATCTACTCCATATCAAAGTCCATGCATTCTCCACTGCTCCCAGTGGCCTCTTTTAGAAATGCTCATAATGTTTATGGGAATGGACAGACAGTGTATACAAAAGGAAATCTCTTCCTTGTACCC i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I e rheMac3.chr3 168573672 0 - 198365852 C e macFas5.chr3 162237426 0 - 192294377 C a score=318248.000000 s hg38.chr21_KI270874v1_alt 84491 145 + 166743 AGCTCAACCACAACACCAAATTGACTTTGTCATAGTCTAGCTAAC-----------TTTTTTTTTTACAAAATAATAACCCCATAGAACACACAGACAAAAACATACACACCATTCAAAAAGTTTATACAATAAAAAGTAAGTTTTATTGCCAACC s panTro4.chr21 3697306 144 + 32799110 AGCTCAACCACAACACCAAATTGACTTTGTCATAGTCTAGCTAAC------------TTTTTTTTTACAAAATAATAACCCCATAGAACACACAGATAAAAACATACACACCATTCAAAAAGTTTATACAATAAAAAGTAAGTTTTATTGCCAACC i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16960214 146 + 48394510 AGCTCAACCACAACACCAAATTGACTTTATCATGGTCTAGCTAAC-------TTTTTTTTTTTTTTACAGAATAATA--CCCATAGAACATACAGACAAAAACATACACAAC-TTCAAAAAGTTTGTACAATAAAAAGTAAGTTTTATTTccaacc i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4457833 156 + 32716333 AGCTCAACCACAGCACCAAATTGACTTTGTCATGGTCTAGCTAACTTTCTTTTTTTTCTTTTTTTTACAAAATAATAACCCCATAGAACATACAGACAAAAACATACACACCATCCAAAAAGTTTATACAACAAAAAGTAAGTTTTATTTCCAAcc i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168573672 149 - 198365852 AGCTCAACCACAACACCAAATTGTCTTTGTCATGGTCTAGCTAAC-------TTTTTTTTTTTTTTACATAATAATAACCCTGTAGAACATACACACAAAAACATACGCACCATTCAAAAAGTATATACAATAAAAAGTAAATTTTATTATCTACC i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162237426 150 - 192294377 AGCTCAACCACAACACCAAATTGTCTTTGTCATGGTCTAGCTAAC------TTTTTTTTTTTTTTTACATAATAATAACCCTGTAGAACATACACACAAAAACATACGCACCATTCAAAAAGTATATACAATAAAAAGTAAATTTTATTACCTACC i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150928615 148 - 180432695 AGCTCAACCACAACACCAAATTGTCTTTGTCATGgtctagctaac--------ttttttttttttaacataataatAACCCTGtagaacatacacacaaaaacatacgCACCATTCAAAAAGTTTATACaataaaaagtaagttttatttCCAACC i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15022652 147 - 90373283 AGCTCAACTACAACACCAAATTGTCTTTGTCATGGTCTAGCTAAC---------TTTTTTTTTTTTACATAATAGTAACCCTGTAGAACATACATACAAAAGCATACACACCATTCAAAAAGTTTATACAATAAAAAGTAAGTTTTATTTCCAACC i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I a score=3780903.000000 s hg38.chr21_KI270874v1_alt 84636 1571 + 166743 CAGATACCTAATCTCATTCTTCACAGGTAAGCTTCATCAATATTTCTTA--------------CATATCTTTTTAAAAAATTCCCAGGCCCATCTAttcttctacatctttttaaagacaaaaaggagtaatatatttgacactttgttctgtaccttgcttttgtttccttttttctttcttttttcttgtaaattagg-tattttctcctcagcacatagaggattacaccatttattttaatgggtagtttattt---------tatgtctatacaataatacatttaaccagttctctgtcagtgtgcttttagggttttcttgctttttgatgttccaacaaagctgAACTCAACTTTTTCACACATGTGGGTGTTGTTTTCTTTTGCTCTCCTTCTTATTCAGCCCAGCTGTTCATCTCTGAGAGTCACATGGCCCTTGGTGTTTGCTATCTACTGTTCTTGTGCAGTGCCGAAACTCCCTTGCAAAAG-AAAAAT--CTCTAGGGAGATTCTTGCATTTGTTCTCTACAGAGCTTTAAGAGCAATACGGGTAAGCAAGTG--TCACAATTTAGAT---GTTATTGAAAACAGATCTTCA------TAGGTTAACTTCTAACCTTAAATATTATACAACGTTGTAATAAGAAACATGGCAAGGAAATTTAAAAATGCTTGCCAAAGTTAAA-AGAAAC-------CAATCACATTTTTATTATACTTCCTAAAAATTCATTTAGCTCTATTTGGAAACCCCTACCAGTCTGAAGAGTCATACATTATTTCCTTGCC--------CTTATGCACTTTTTCACTTGACAGGCAGAAACCTAGTTTTCATTTTATTAAATGAAAATGAATACTCAGCAATACCTATCGTTTTTATTTATATTTTTAGAATACCAAACATCAAATAAC--AACTTCTGATGACACTGAGGCATGATTAATCATTATTATAACTCTATTGTGTCATCTCTGCAAATACTTTTCATTTGTCTTTATTTGTAGCAGATGAGGACTGCTCC------tttttttttttttt------ttttttttttt---tacagagtctcacactgtctcccaggctggagtgcaatggcagtgatctcg-----gctcactgcaacctccgcctcccgggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggca-cctgccactacacctggctaatttttttgtatttttggtagagagagggtttcactatgttggccaggctgatctcgaactcctgaccttgtgatccactcacctcagcatcctgaagtgctgggattacagccatgagccaccacacccggccTGATGAGGACTGTTTTCATTTCAAAAACAACTATTCAATTCAACTTCTTCAATAAAAAGTGAATTTAGTAATGGAATGAGCTGGTAAAATGCTTAACAACTTTTTGCTAATAGTACAATAAAAAGAATTTTTAAATG-----AACTATTATTTGAGCCAGAATAGCCCAAATATCCCCTAAATGACCATAACTTTTCACTTTTTTA-TATTGATTTGTTATAGGACAGATCAGCACCTTATAAAATGCTGTCCCACAGAACGATGTTCCATGATTGTTAATAGTTATA s panTro4.chr21 3697450 1573 + 32799110 CAGATACCTAATCTCATTCTTCACAGGTAAGCTTCATCAATATTTCTTA--------------CATATCTTTTTAAAAAATTCCCAGGCCCATCTAttcttctacatctttttaaagacaaaaagaagtaatatatttgacactttgttctgtaccttgcttttgtttccttttttctttcttttttcttgtaaattggg-tattttctcctcagcacatagaggattacaccatttattttaatgggtagtttattt---------tatgtctatacaataatacatttaaccagttctctgtcagtgtgcttttagggttttcttgctttttgatgttccaacaaagctgAACTCAACTTTTTCACACGTGTGGGTGTTGTTTTCTTTTGCTCTCCTTCTTATTCAGCCCAGCTGTTCATCTCTGAGAGTCACATGGCCCTTGGTGTTTGCTATCTACTGTTCTTGTGCAGTGCAGAAACTCCCTCACAAAAG-AAAAAT--CTCTAGGGAGATTCTTGCATTTGTTCTCTACAGAGCTTTAAGAGCAATATGGGTAAGCAAGTG--TCACAATTTAGAT---GTTATTGAAAACAGATCTTCA------TAGGTTAACTTCTAACCTTAAATATTAT---ACGTTGTAATAAGAAACATGGCAAAGAAATTTAAAAATGCTTGCCAAAGTTAAA-AGAAAC-------CAATCACATTTTTATTATACTTCCTAAAAATTCATTTAGCTCTATTTGGAAACCCCTACCAGTCTGAAGAGTCATACATTATTTCCTTGCC--------CTTATGCACTTTTTCACTTGACAGGCAGAAACCTAGTTTTCATTTTATTAAATGAAAATGAATACTTAGCAATACCTATCGTTTTTATTTATATTTTTAGAATACCAAACATCAAATAAC--AACTTCTGATGACACTGAGGCATGATTAATCATTATTATAACTCTATTGTGTCATCTCTGCAAATACTTTTCATTTGTCTTTATTTGTAGCAGATGAGGACTGCTCCtttttttttttttttttttt------ttttttttttt---tacagagtctcacactgtctcccaggctggagtgcaatggcagtgatctcg-----gctcactgcaacctccgcctcccgggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggca-cctgccactacacctggctaa-ttttttgtatttttggtagagagagggtttcactatgttggccaggctggtctcgaactcctgaccttgtgatccactcgcctcagcatcctgaagtgctgggattacagccatgagccaccacacccggccTGATGAGGACTGTTTTCATTTCAAAAACAACTATTCAATTCAACTTATTCAATAAAAAGTGAATTCAGTAATGGAATGAGCTGGTAAAATGCTTAATAACTTTTTGCTAATAGTACAATAAAAAGAATTTTTAAATG-----AACTATTATTTGAGCCAGAATAGCCCAAATATCCCCTAAATGACCATAACTTTTCACTTTTTTA-TATTGTTTTGTTATAGGACAGATCAGCACCTTATAAAATGCTGTCCCACAGAACGATGCTCCATGAATGTTAATAGTTATA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16960360 1559 + 48394510 cagatacctaatctcattcttcacaggtaagcttcatcaatatttctta--------------catatctttttaaaaaattcccaggcccatctattcctctacatctttttaaggacaaaaaggagtaacatatttgacactttgttctgtaccttgcttttgtttctgtttttctttcttttttcttgtaaatcggg-tattttttcctcagcacatagaggtctacaccatttattttaatgggtagtttgttt---------tatgtctatacaataatacatttaaccagttctctgtcagtgtgcttttagggttttcttgctttttgatgttccaacaaagctgaattcaactttttcacacatgtGGATGTTGTTTTCTTTTGCTCTCCTTTTTATTCAGTCCAGCTGTTAATCTCTGAGTGTCACACGGCCCTTGGTGTTTGCTATCTACTGTTCTTGTGCAGTTCAGAAACTCCCTTGCAAAAGAAAAAAT--CTCTAGGGAGATTCTTGCATTTGTTCTCTACAGAGCTTTAAGAGCAATATGGGTAAGCAAGTG--TCACAATTTAGAT---GTTATTGAAAACAGATCTTCA------TAGGTTAACTTCTAACCTTAAATATTATACAACGTCATAATAAGAAACATGGCAAAGAAATTTAAAAGTGCTTACCAAAGTTAAA-AGAAAC-------CAATCACTTTTTTATTATACTTCCTAAAAATTCATTTAGCTCTATTTGGAAACCCCTACCAGTCTGAAGAGTCATACATTATTTCCTTGCC--------CTTATGCACTTTTTCACTTGACAGGCAGAAACCTAGTTTTCATTTTATTAAATGAAAATGAATACTCAGCAATACCTATCATTTTTATTTATATTTTTAGAATACCAAATATCAAAT-----AACTTCTGATGACACTGAGAAACAATTAATCATTATTATAACTCTATTGTGTCATATCTGCAAATACTTTTCATTTG--TTTATTTGTAGCAGATGAGGACTGTTCC-----------ttttttttt------ttttttttttt---aatagag--tcacactgtctcctgggctggagtgcaatggcagtgatctcg-----gctcactgcaacctccgcctcccaggttcaagcaattctcctgcctcagcctcctgagtagctgggattacagaca-cctgccactacacgtggctaa-ctttttgtatttttagtagagagagagtttcactatgttggccaggttggtctcaaactcctgaccttgtgatccactcgcctcagcgtcctaaagtgctgggattacagccgtgagccaccgcacccggccTGATGAGGACTGTTTTCATTTGAAAAACAACTATTCAATTCAACTTCTTCAATAAAAAGTGAATTCAGTAATGGAATGAGCTGGTAAAATGCTTAATAACTTTTTGCTAATATTACAATAAAAAGAATTTTTAAATG-----AACTATTATTTGAGCTGGAATAGCCCAAATATCCCCTAAATGACCATAACTTTTCACTTTTTTA-TATTGTTTTGTTATAGGACAGATCAGCACCTTATAAAATGCTGTCCCATAGAACAATGCTCCATGAATGTTAATAGTTATA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4457989 1559 + 32716333 cagatacctaatctcattcttcacaggtaagcttcatcagtatttctta--------------catatcttttttaaaaattcccaggcacatctattcttctacatctttttaaagacaaaaaggagtaatatatttgacatgttgttctgtaccttgcttttgtttccttttttctttcttttttcttgtaagtcggg-tattttttcctcagcacatagaggtctacgccatttattttaatgggtagtttattt---------tatgtctatacaataatacatttaaccagttctctgtcagtgtgctttcagggttttcttgctttttgatgttccaacaaagctgAATTCAACTTTTTCACACATGTGGGTGTTGTTTTCTTTTGCTCTCCTTCTTATTCAGCCCAGCTGTTCATCTCTGAGTGTCACACGGCCCTTGGTGTTTGCTATCTACTGTTCTTGTGCAGTTCAGAAACTCCCTTGCAAAAGAAAAAAC--CTGTAGGGAGATTCTTGCATTTGTTCTCTACAGAGCTTTAAGAGCAATATGGGTAAGCAAGTG--TCACAATTTAGAT---GTTATTGAAAACAGATCTTCA------TAGGTTAACTTCTAACCTTAAATATTATACAACGTGGTAATAAGAAACATGGCAAAGAAATTTAAAAGTGCTTGCCAAAGTTAAA-AGAAAC-------CAATCACTTTTTTATTACACTTCCTAAAAATTCATTTAGCTCTATTTGGAAACCCCTACCAGTCTGAAGAGTCATAGATTATTTCCTTGCC--------CTTATACACTTTTTCACTTGACAGGCAGAAACCTAGTTTTCATTTTATTAAATTAAAATGAATACTCAGCAATACCTATCATTTTTATTTATATTTTTAGAATACCAAACATCAAATAAC--AACTTCTGATGACACTGAGGCACAATTAATCATTATTATAACTCTATTGTGTCATCTCTGCAAATACTTTTCATTTGTCTTTATTTTTAGCAGATGAGGACTGTTCC------------------tt------ttttttttttc---cacagagtctcacactatctcccaggctggagcgcagtggcagtgatctcg-----gctcactgcaacctctgcctcctgggttcaagcaattctcctgcctcagcttcctgagtagctgggattacaggca-cccgctactacacctggctga-ttttttgtgtttttagtagagagagggtttcactatgttggccagactggtcttaaactcctgaccttgtgatccactcgcctcagcgtcctaaagtgctgggattacagccatgagccaccgcacccggccTGATGAGGACTGTTTTCATTTCAAAAACAACTATTCAATTCAACTTCTTCAATAAAAAGTGAATTCAGTAATGGAATGAGCTGGTAAAATGCTTAATAAGTTTTTGCTAATAGTACAATAAAAAGAATTTTTAAATG-----AACTATTATTTGAGCCAGAACAGCCTACATATCCCCTAAATGACCATAACTTTTCACTTTTTTA-TGTTGTTTTGTTATAGGACAGATCAGCATCTTATAAAATGCTGTCCCACAGAACAATGCTCCATGAATGTTAATAGTTATA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168573821 1577 - 198365852 CAGATACCTAATCTCATTTTTCACAGCTAAGTTTCATCAATATTTCTTA--------------CATGTCTTTAAAAAAAATCCCCAGGCCCATCTATTCTTCTACATATTTTTAAAGAGAAAAAGGAGTAATATATTTGACACTTTGTTCTGCAGCTTGCCTTTGTTTCCTTTTTTCTTTCTTTTTTCTTGTAAAAAAGGGTTTTTTTTCCTCAGCACATCAAGGTCTACACCATTTATTTTAATGGGTAGTTTATTT---------TATATCTATACAATAATACATGTAACCAGTTCTCTGTCAGGGTGCTTTTAGGATTTTCTTGTTTTTTAATGTTCCAACAAAGCTGAATTCAACTTTTTCACAAGTGTGGGTGTTGGTTTCTTTCGCTCTGCTTCTTATGCAGCCCAGCTGTTCATCTCTGAGTGTCACACGGCCCTTGGTGTTTGCTATCTACTATTCTTGTGCAGTTCAGAAACTCCCTTGCAAAAGAAAAAAT--TTCAAGGGAGATTCTTGCATTTGTTCTCTACAGAACTTTAAGAGCAATATGGGTAAGCAAGTG--TCACAATTTAGAT---GTTATTAAAAACAGATCTTCA------TAGGTTAACTTCTAACCTTAAATATTATACAATGTTATAATAAGAAACATGGCAAAGGCATTTAAAAGTGCTTTCCAAAGTTAAA-AGAAAC-------CAATCACTTTTTTATTATACTCCCTAAAAATTCATTTAGCTCTATTTGGAAACCCCTACCAGTCTGAAGAGTCATACATTATTTCCTTGCC--------CTTATGCACTTTTTCCCTTGACAGGCAAAAACCTAGTTTTCATTTTATTAAATGAAAATGAATACTGAGCAATACCTATCATTTTTATTTATATTTTTAGACTACCAAACATCAAATAAC--AACTTCTAATAACACTGAGGCAAAATTAGTCATTATTCTAACTGTATTGCATCATCTCTGCAAATACTTTTCATTTGTCTTCATTTGCAGCAGATGAGGACTGTTCC--------tttttttttatt------tttttatttttggagacagagtctcacactgtctcctgggctgaagtgcaatggcaatgatctcggctcggctcactgcaacctccgcctcccaggttcaagcaattatcctgcctcagcctcctgagtagctggga-tacaggca-cccaccactgcacctggctaa-ttttttatatttttagtagagacagggtttcactatgttggccaggctggtctgaaactcctgacctcatgatctgctcgcctcagtgtcctaaagtgctgggattatagccgtgagccaccacacccagccTGATGAGGAATGTTTTCATTTCAAAAACAACTATTCAATTCAACTTCTTCAATAAAAAGTGAATTCAGTAATAGAATGAGCCGATAAAATGCTTAATAAGTTTTTGCTAATAGTAAAATAAAAAGAATTTTTAAATG-----AACTATTATTTGAGCCGGGATAGCCCAAATACCCCCTAAATGACCATAACTTTTCACTTTTTTA-TATTGTGTTGTTATAGGACAGATCAGCACATTATAAAATGCTGTTACACAGAACAATGCTCCATGAATGTTAATGGTTATA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162237576 1578 - 192294377 CAGATACCTAATCTCATTTTTCACAGCTAAGTTTCATCAATATTTCTTA--------------CATGTCTTTAAAAAAAATCCCCAGGCCCATCTATTCTTCTACATATTTTTAAAGAGAAAAAGGAGTAATATATTTGACACTTTGTTCTGCAGCTTGCctttgtttccttttttctttcttttttcttGTAAAAAAGGTTTTTTTTTCCTCAGCACATCAAGGTCTACACCATTTATTTTAATGGGTAGTTTATTT---------TATATCTATACAATAATACATGTAACCAGTTCTCTGTCAGGGTGCTTTTAGGATTTTCTTGTTTTTTAATGTTCCAACAAAGCTGAATTCAACTTTTTCACAAGTGTGGGTGTTGGTTTCTTTCGCTCTGCTTCTTATGCAGCCCAGCTGTTCATCTCTGAGTGTCACACGGCCCTTGGTGTTTGCTATCTACTATTCTTGTGCAGTTCAGAAACTCCCTTGCAAAAGAAAAAAT--TTCAAGGGAGATTCTTGCATTTGTTCTCTACAGAACTTTAAGAGCAATATGGGTAAGCAAGTG--TCACAATTTAGAT---GTTATTAAAAACAGATCTTCA------TAGGTTAACTTCTAACCTTAAATATTATACAATGTTATAATAAGAAACATGGCAAAGACATTTAAAAGTGCTTTCCAAAGTTAAA-AGAAAC-------CAATCACTTTTTTATTATACTCCCTAAAAATTCATTTAGCTCTATTTGGAAACCCCTACCAGTCTGAAGAGTCATACATTATTTCCTTGCC--------CTTATGCACTTTTTCACTTGACAGGCAAAAACCTAGTTTTCATTTTATTAAATGAAAATGAATACTGAGCAATACCTATCATTTTTATTTATATTTTTAGAATACCAAACATCAAATAAC--AACTTCTAACAACACTGAGGCAAAATTAGTCATTATTCTAACTGTATTGCGTCATCTCTGCAAATACTTTTCATTTGTCTTCATTTGCAGCAGATGAGGACTGTTCC-------ttttttttttatt------tttttatttttggagacagagtctcacactgtctcctgggctgaagtgcaatggcaatgatcttggcttggctcactgcaacctctgcctcccaggttcaagcaattatcctgcctcagcctcctgagtagctggga-tacaggca-cccaccactgcacctggctaa-ttttttatatttttagtagagacagggtttcactatgttggccaggctggtctgaaactcctgacctcatgatctgctcgcctcagtgtcctaaagtgctgggattatagctgtgagccaccacacccagccTGATGAGGAATGTTTTCATTTCAAAAACAACTATTCAATTCAACTTCTTCAATAAAAAGTGAATTCAGTTATAGAATGAGCCGATAAAATGCTTAATAAGTTTTTGCTAATAGTAAAATAAAAAGAATTTTTAAATG-----AACTATTATTTGAGCCGGGATAGCCCAAATACCCCCTAAATGACCATAACTTTTCACTTTTTTA-TATTGTGTTGTTATAGGACAGATCAGCACATTATAAAATGCTGTTACACAGAACAATGCTCCATGAATGTTAATGGTTATA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150928763 1575 - 180432695 CAGATACCTAATCTCATTTTTCACAGCTAAGTTTCATCAATATTTctta--------------catatctttaaaaaaaatccccaggCCCATCTATtcttctacatatttttaaagagaaaaaggagtaatATATTTGACACTTTGTTCTGCAGCttgcctttgtttccttttttctttctttttccttgtaaaaaagg-ttttttttcctcagcacatCAAGGTCTACACCATTTATTTTAATGGGTAGTTTATTT---------TACATCTATACAATAATACATGTAACCAGTTCTCTGTCAGGGTGCTTTTagagttttcttgttttttaatgttcCAACAAAGCTGAATTCAACTTTTTCACACGTGTGGGTGTTGGTTTCTTTCGCTCTGCTTCTTATGCAGCCCAGCTGTTCATCTCTGAGTGTCACACGGCCCTTGGTGTTTGCTATCTACTATTCTTGTGCAGTTCAGAAACTCccttgcaaaagaaaaaat--ttcgaGGGAGATTCTTGCATTTGTTCTCTACAGAACTTTAAGAGCAATATGGGTAAGCAAGTG--TCACAATTTAGAT---GTTATTAAAAACAGATCTTCA------TAGGTTAACTTCTAACCTTAAATATTATACAATGTTATAATAAGAAACATGGCAAAGACATTTAAAAGTGCTTTCCAAAGTTAAA-AGAAAC-------CAAtcacttttttattatacttcctAAAAATTCATTTAGCTCTATTTGGAAACCCCTACCAGTCTGAAGAGTCATACATTATTTCCTTGCC--------CTTATGCACTTTTTCACTTGACAGGCAAAAACCTAGTtttc-----attaaatgaaaatgaatactGAGCAATacctatcatttttatttatatatttagaataccAAACATCAAATAAC--AACTTCTAATAACACTGAGGCAAAATTAGTCATTATTCTAACTGTATTGTGTCATCTCTGCAAAtacttttcatttgtctttatttgcagCAGATGAggactgttcc----tttttttttttttttt------tttttttttttggagacagagtctcacactgtctcccgggctgaagtgcaatggcaatGATCtcggctcggctcactgcaacttccgcctcccaggttcaagcaattatcctgcctcagcctcctgagtagctggga-tacaggca-cccaccactgcacctggctaa-ttttttgtatttttagtagagacagggtttcactatgttggccaggctggtctgaaactcctgacctcatgatctgctcgcctcagtgtcctaaagtgctgggattatagccgtgagccaccacacccagcctgatgaggaatgttttcatttcaaaaacaacTATTCAATTCAACTTCTTCAATAAAAAGTGAATTCAGTAATAGAATGAGCCGATAAAATGCTTAATAAGTTTTTGCTAATAGtagaataaaaagattttttaaatg-----aactattaTTTGAGCCGGGATAGCCCAAATACCCCCTAAATGACCAtaacttttcactttttta-tattGTGTTGTTATAGGACAGATCAGCACGTTATAAAATGCTGTTACACAGAACAATGCTCCATGAATGTTAATGGTTATA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15022799 1585 - 90373283 CAGATACCTAATCTCATTTTTCACAGGTAAGTTTCATCAATATTTCTTA--------------CATATCTTTAAAAAAAATCCCCAGGCCCATCTATTCTTCTACATATTTTTAAAGAGAAAAAGGAGTAATATATTTGACACTTTGTTCTGCAGCTTGCctttgtttccttttttctttcttttttcttGTAAAAAAGG-TTTTTTTTCCTCAGCACATCAAGGTCTACACCATTTATTTTAATGGATAGTTTATTT---------TATATCTATACAATAATACATGTAACCAGTTCTCTGTCAGGGTGCTTTTAGGGTTTTCTTGTTTTTTAATGTTCCAACAAAGCTGAATTCAACTTTTTCACACGTGTGGGTGTTGGTTTCTTTCGCTCTGCTTCTTATGCAGCCCAGCTGTTCATCTCTGAGTGTCACACGGCCCTTGGTGTTTGCTATCTACTATTCTTGTGCAGTTCAGAAACTCCCTTGCAAAAGAAAAAAT--TTCGAGGGAGATTCTTGCATTTGTTCTCTACAGAACTTTAAGAGCAATATGGGTAAGCAAGTA--TCACAATTTAGAT---GTTACTAAAAACAGATCTTCA------TAGGTTAACTTCTAACCTTAAATATTATACAGTGTTATAATAAGAAACATGGCAAAGACATTTAAAAGTGCTTTCCAAAGTTAAA-AGAAAC-------CAATCACTTTTTTATTACACTTCCTAAAAATTCATTTAGCTCTATTTGGAAACCCCTACCAGTCTGAAGAGTCATACATTATTTCCTTGCC--------CTTATGCACTTTTTCACTTGACAGGCAAAAACCTAGTTTTCATTTTATTAAACGAAAATGAATACTGAGCAATACCTATCATTTTTATTTATATTTTTAGAATACCAAACATCACATAAC--AACTTCTAATAACACTGAGGCAAAATTAGTCATTATTCTAACTGTATTGCGTCATCTCTGCAAATACTTTTCATTTGTCTTTATTTGCAGCAGATGAGGACTGTTCC------TTtttttatttatttatttatttttttttttggagacagagtctcacactgtctcccgggctgaagtgcgatggcaatgatctcggctcagctcactgcaacctcagcctcccaggttcaagcaattatcctgcctcagcctcctgagtagctggga-tacaggcaccccaccactgcacctggctaa-ttttttgtatttttagtagagacagggtttcactatgttggccaggctggtctgaaactcctgacctcatgatctgctcacctcagtgtcctaaagtgctgggattatagccgtgagccaccacacccagccTGATGAGGAATGTTTTCATTTCAAAAACAACTATTCAATTCAACTTCTTCAATAAAAAGTGAATTCAGTAATAGAATGAGCCGATAAAATGCTTAATAAGTTTTTGCTAACAGTAGAATAAAAAGAATTTTTAAATG-----AACTATTATTTGAGCCGGGATAGCCCAAATACCCCCTAAATGACCATAACTTTTCACTTTTTTA-TATTGTATTGTTATAGGACAGATCAGCACATTATAAAATGCTGTTACACAGAACAATGCTCCATGAATGTTAATGGTTATA i chlSab2.chr2 C 0 C 0 s mm10.chr16 78126211 1195 + 98207768 CAGGTACCCATTCCTAGTCCTAGTGGATCA--TTCACCAACAtttttaagggttttttaagggttttttTTTTTCAGAAACTTC---------CTATTCTCCCGCATCTTTCTAAGCATAAAGAGGAGAGTTATAT--------TTGTTCTGTAC--------TGTTAAC-TGTTTCTCCTTTCTGTCTGACTAATGGAA-TTCATTTTTCTTCACATACC--------------TGCTTTCAGTGAACAGTTTGGCTGAGAGTAACTATTTGTCCCTATTGATGCACTTAAACATTTCTTCATCCATATG------------TCATATTTT---ATACTCAAGCAAAGATGAAGGTGAGTTTTCCATACACCTGAG------TTGCCTCTGCTCT-----------AGCCTGAAATCCCCACCCCATGTGTCAGTCAGTGCTCAGTTTTGGCTGTCTACTCTTCCTGTGCAAACCAGAGACTTCTTCATAAAAGAAAAGGTGACTATAGACAAACAGTTGAA-TAATTCTATATGGAGCTTCAGGAACACTACCATTTTGCAAGTGTCTCATAGTTTAGATTTGGCCCTTATTGACCAATCTGCACTACTGTAAATTAACTTCCAAC-----------TCCAGGGTTCTAACAATTGACAAGATGAAGACA-TCAAAAATGCTTGTAAAAGTTAAATATGTATGTTGTTGTGATTGTTGCTGTTTTATTCATCCT-AAATTTCATTTAGCTATTTTCAGAAGCTTCTACCAGCCTGAAAACTCATACATTATTTCAAGGCTGATTCTAATTTACACACACTATCATTTGACAGGCAGAAATGTACTTTTCATTTCAT----------TGATTATCCAATAATTCATATC-TTTTTATTTATATGTTTGTAATGCCAATCATCTAATAACGTGCCTTCCAGCAGCACTGAAGCATGACTGATC--TGTCATAAC------------------------------------------------------------ACTCC----------------------------------------TACACAGTCT---------------------------------------------------------------------------------------TGCTTTACTCTC---------------------CG---------------TGGGTAA---------------------------------------------GGCTG--------------------TGATCATTCAGAACCAGCATT----ACTGCTGGAAT------------------------------------------------------------TTTAACTGGACCTCTTTAGTTAGAAGTCACTTCAGTAATAGAGC-AACTGGTGAGACACTTAAT-GCCTTTTGGTAATAGCAAAAGGAAAGGAAAGAACAAAAAGTAGTGGCTCTTGTTGAGGTCAAGATGGCTCAAAGAGCCCCTAGATGACTATGACTCTACATTTTCCAATTATGATTTTGTTATAAAACTGATGAGCACTTTATCAGCTGCTGTTCTATAGAACATT--CTCAAAGATGTTTATAGTTAT- i mm10.chr16 I 193 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I a score=698776.000000 s hg38.chr21_KI270874v1_alt 86207 273 + 166743 AGAACAAAAGGGTGG-GAAAGGGAACATTTAATGTATAAATGTTCATTAAGAAACTTCGA------AACAATGTACAGGATGAATCTTTTCAC-TTTTTT-TCCCTTTGTCCTACTAGTCAGCATTCTCTGGTATTCTAGAAATCACCAGAAAGACCAGCATG-----------CAAACTTAATCATGAATAGCTATGAAACAATGATTCTCCTTTTTAAAATCCTTAGAATAATGCAACTTAGAATGAA-TTATCTTCAGCATTATGAGGAACATTGTTTTTTAAACGTTATC-- s panTro4.chr21 3699023 274 + 32799110 AGAACAAAAGGGTGG-GAAAGGAAACATTTAATGTATAAATGTTCATTATGAAACTTCGA------AACAATGTACAGGATGAATCATTTCACTTTTTTT-TCCCTTTGTCCTACTAGTCAGCATTCTCTGGTATTCTAGAAATCACCAGAAAGACCAGCATG-----------CAAACTTAATCATGAATAGCTACGAAACAATGATTCTCCTTTTTAAAATCCTTAGAATAATGCAACTTAGAATGAA-TTATCTTCAGCATTATGAGGAACATTGTTTTTTAAACGTTATC-- i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16961919 273 + 48394510 AGAACAAAAGGGTGGAAAAAGGGAATATTTAACGTATAAATATTCATTATGAAACTTCAA------AACAATGTACAGGATGAATCATTTCACTTTTTTT-TCCCTTTGTCCTACTAGTCAGCATTCTCTGGTATTCTAGAAATCACCACAAAGACCAGCATG-----------CAAACTTAATCATGAATAGCTATGAAAC--TGATTCTCCCTCTTGAAATCCTTAGAATAATGCAACTTAGAATGAA-TTATCTTCACCATTATGAGGAATATTGTTTTTTAAACGTTATC-- i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4459548 276 + 32716333 AGAATAAAAGGGTGGGAAAAGGGAACATTTAATGTATAAATGTTCATTATGAAACTTCAA------AACAATGTACAGGATGAATCATTTCACTTTTTTT-TCCCTTTGTCCTACTAGTCAGCATTCTCTGGTATTCTAGAAATCACCAGAAAGACCGGCATG-----------CAAACTTAATCATGAATAGCTATGAAACAAGGATTCTCCTTTTTAAAACCCTTGGAATAATGCAACTTAGAATGAATTTATCTTCAGCATTATGAGGAACATTGTTTTTTAAACGTTATC-- i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168575398 267 - 198365852 AGAACAAAATGGTGGGAAAAGGGAACATTTAATGTGTAACTCTTCATTCTGAAACTTCAA------AACAATGTATGGGATGAATCATTTCACTTTTTTTCCCCCTTTGTCCTCCTAGTTAGCATTCTCTGGTATTCTAGAAATCACCAGAAAGACCAGTATG-----------CAAACTTAATCATGAATAGCTATGAAACAA---------TTTTTAAAATCCTTAAAATAGTGCAACTTAGAATGAA-TTATCTTCAGCATTATGAGGAACATTGTTTTTTAAACGTTACC-- i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162239154 267 - 192294377 AGAACAAAATGGTGGGAAAAGAGAACATTTAATGTGTAACTCTTCATTCTGAAACTTCAA------AACAATGTATGGGATGAATCATTTCACTTTTTTTCCCCCTTTGTCCTACTAGTTAGCATTCTCTGGTATTCTAGAAATCACCAGAAAGACCAGTATG-----------CAAATTTAATCATGAATAGCTATGAAACAA---------TTTTTAAAAACCTTAAAATAGTGCAACTTAGAATGAA-TTATCTTCAGCATTATGAGGAACATTGTTTTTTAAACGTTACC-- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150930338 266 - 180432695 AGAACAAAATGGtgggaaaagggaacatttaatGTGTAACTCTTCATTATGAAACTTCAA------AACAATGTATGGGATgaatcatttcacttttttt-cccctttgtcctACTAGTTAGCATTCTCTGGTATTCTAGAAATCACCAGAAAGACCAGTATG-----------CAAACTTAATCATGAATAGctatgaaacaa---------tttttaaaatccttaaaatagCGCAACTTAGAATGAA-TTATCTTCAGCATGATGAGGAACATTGTTTTTTAAACGTTACC-- i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15024384 266 - 90373283 AGAACAAAATGGTGGGAAAAGGGAACATTTAATGTGTAACTCTTCATTATGAAACTTCAA------AACAATGTATAAGATGCATCATTTCACTTTTTTT-CCCCTTTGTCCTACTAGTTAGCATTCTCTGGTATTCTAGAAATCACCAGAAAGACCAGTATG-----------CAAACTTAATCATGAATAGCTATGAAACAA---------TTTTTAAAATCCTTAAAATAGTGCAACTTAGAATGAA-TTATCTTCAGCATTATGAGGAACATTGTTTTTTAAACGTTACC-- i chlSab2.chr2 C 0 C 0 s mm10.chr16 78127406 225 + 98207768 TGAATAAAACAGAGGGAAAGGGG---TCTTGAAATGTAA------ATTATGAA--CTCAA------AATAG--------------CACTTCA--TTGACT-CCC----------ATAGCTAGTGTTTATTATTATTCTAAAA---ACCAAAAAGATCAATATTTTATTATGAACCTACTTTAAATATGAATAGCTATGGAAATA--------------------TTTAGAATAATGTGACACAGAGTGAA-AGTTTCCCAGC-TAATGTGAAATGCTATTTTTTTGATGTTTTC-- i mm10.chr16 C 0 I 2221 s canFam3.chr31 13828298 254 + 39895921 AAAACAAAAAAAGGGGCAAAAGG-GCATTTAGTGTGTA------CATTATAAAACTCCAAAAAGGTAACAGTACACAGGATGTATCATTTCTCTCTTTTT-TCCCTTAAGCC-AGTAGTTAACATATCCTGATATT----------CCAGAAAGACCACtatt-----------taatattaattataaa----tacagaacaaaaata----tttttaaaaatcttagaataatataaCCTAGAATGAA-TTATCCCTAGCATTATGAGAAAAAC---TTTTTAAAAATTGTACT i canFam3.chr31 I 3116 C 0 e calJac3.chr21 21929321 2056 + 50472720 I a score=379011.000000 s hg38.chr21_KI270874v1_alt 86480 155 + 166743 AACCTTAATGGATGTAACAAGTAGAAATGTTTCTATACATATAAGTCTCTTGTTAAAATTCTCTTTTTAAAAAAATCACTGTGTGACC---TAATTTTCAAAATATCTGCTTTCTGTCTACCTTTCCCAACCTACTATTTCCCAT-TCAGCAAAACCAT s panTro4.chr21 3699297 155 + 32799110 AACCTTAATGGATGTAACAAGTAGAAATGTTTCTATACATATAAGTCTCTTGTTAAAATTCTCTTTTTAAAAAAATCACTGTGTGACC---TAATTTTCAAAATATCTGCTTTCTGCCTACCTTTCCCAACCTACTATTTCCCAT-TCAGCAAAACCAT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16962192 150 + 48394510 AACCTTAATGGATGTAACAAGTAGAAATGTTTCTATACATATG----TCTCATTAAAATTCTCTTTTAAAAAAAATCACTGTGTGACT---TAA-TTTCAAAATATCTGCTTTCTGTCTACCTTTCCCAACCTACTATTTCCCAT-TCAGCAAAACCAT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4459824 155 + 32716333 AACCTTAATGGATGTAACAAATAGAAATGTTTCTATAAGTATAAGTCTCTTGTTAAAATTCTCTTTTAAAAAAAATCACTGTGTGCCC---TAATTTTCAAAATATCTGCTTTCTGTCTACCTTTCCCAACCTACTATTTCCCAT-TCAGCAAAACCAT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168575665 153 - 198365852 AACCTTAATGGATGTAACAAGTAGAAATGTTTCTATACATATAAGTCTCTTGTTAAAATTCTCTTTTTAAAAAAATCACTATGTGACC---TAATTTTCAAA--ACCTGCTTTCTGTCTACCTTTCCCAACCTACTATTTCCCAT-TCAGCAAAACTAT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162239421 153 - 192294377 AACCTTAATGGATGTAACAAGTAGAAATGTTTCTATACATATAAGTCTCTTGTTAAAATTCTCTTTTTAAAAAAATCACTATGTGACC---TAATTTTCAAA--ACCTGCTTTCTGTCTACCTTTCCCAACCTACTATTTCCCAT-TCAGCAAAACTAT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150930604 153 - 180432695 AACCTTAATGGATGTAACAACTAGAAATGTTTCTATACATATAAGTCTCttgttaaaattctttttttaaaaaaatcactatgtGACC---TAATTTTCAAA--ACCTGCTTTCTGTCGACCTTTCCCAACCTACTATTTCCCAT-TCAGCAAaactat i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15024650 134 - 90373283 AACCTTAATGGATGTAACAAGTAGAAATGTTTCTATACATATAAGTCTCTTGTTAAAATTCTCTTTTTAAAAAAATCACTATGTGACC---TAATTTTCAAA--ACCTGCTGTCTACC-------------------TTTCCCAT-TCAGCAAAACTAT i chlSab2.chr2 C 0 C 0 s canFam3.chr31 13828552 135 + 39895921 AAGCTTAATAGATGTAAC------AAATGTTTCTAAACATGTGAATCTC----------------TTTAAAAATATGACTGCTTGACCTGTTGATTTTCAAA--ATCTGTTTCCTGTCTACCTTTCCGAAACTTTTCTTTCCCACATTCCCAAGTCCAC i canFam3.chr31 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78127631 2221 + 98207768 I a score=1148552.000000 s hg38.chr21_KI270874v1_alt 86635 406 + 166743 AAATTTCCTTTTTGAGATTTAAGCAAGAGGTTAACTCTTTTGTTAAGCACTGAGCC---CTCATGT-GTCACCCATCCCCTCTTCTGTGT-----------------------TCCCAGGCCCTCTAGAAACCTACCACTTATTTTCTTTTATCACATAGTACTATAATTTGGCATGTATTTTTCTGCCGGTTTTACTAGGCCCAAAGAACCTAAGGATCAGAGACAAATtattagtatcagtattagtgttagtgctagcattagtatcagtattTACAGGCATGgtacctacacgggaacctggaactctccaagcattcaataaatgtgtgttaaataaataaatGAGCAAAAGTGTCTCCAGAGCCTCCATGTTATCAATGTTTTTGTCAATAATTTAAATCAGGAAGAGAATCAGGTCTGTAGAAAAT s panTro4.chr21 3699452 406 + 32799110 AAATTCCCTTTTTGAGATTTAAGCAAGAGGTTAACTCTTTTGTTAAGCACTGAGCC---CTCATGT-GTCACCCATCCCCTCTTCTGTGT-----------------------TCCCAGGCCCTCTAGAAACCTACCACTTATTTTCTTTTATCACATAGTACTATAATTTGGCATGTATTTTTCTGCCGGTTTTACTAGGCCCAAAGAACCTAAGGATCAGAGACAAATTATTAGTATCAGTATTAGTGTTAGTGCTAGCATTAGTATCAGTATTTACAGGCATGgtacctacacgggaacctggaactctccaagcattcaataaatgtgtgttaaataaataaatGAGCAAAAGTGTCTCTAGAGCCTCCATGTTATCAATGTTTTTGTCGATAATTTAAATCAGGAAGAGAATCAGGTCTGTAGAAAAt i panTro4.chr21 C 0 I 802 s ponAbe2.chr21 16962342 406 + 48394510 AAATTTCCTTTCTGAGATTTAAGCAAGAGGTTAACTCTTTTGTTAAGCACTGAGCC---CTCAGGT-GTCACCCATCCCCTCTTCTGTGT-----------------------TCCCAGGCCCTCTAGAAACCTACCACTTATTTTCTCTTATCACATAGTACTATAATTTGGCATTTATTTTTCTGCCAGTTTTACTAGGCCCAAAGAACCTAGGGATCAGAGACAAATTACTAGTATCAGTATTAGTGTTAGTGCTAGTATTAGTATCAGTATTTACAGGCATGGTACCTATATGGGAacctagaactctgcaagcattcaataaatgtgtgttaaataaataaatGAGCAAAAGTATCTCTAGAGCCTCCATGTTATCAATGCTTTTGTCGATAATTTAAATCAGGAAGAGAATCAGGTCTGTAGACAAT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4459979 405 + 32716333 AAATTTCCTTTTTGAGATTTAAGCAAGAGGTTAACTCTTTTGTTAAGCACTGAGCC---CTCAGGT-ATCACCCATCCCCTCTTCTGTGT-----------------------TCCCAGGCCCTCTAGAAACCTACCACTTATTTTCTTTTATCACATAGTGCTAT-ATTTGGCATTTATCTTTCTGCCGGTTTTACTAGGCCCAAAGAACCTAGGGATCAGAGACAAATtattagtaccagtattagtgttagtgctagtattagtatcagtattTACAGGCATAATAcctatacaggaacctggaattctgcaagcattcaataaatgtgtgttaaataaataaatGAGCAAAAGTGTCTCTAGAGCCTCTGTGTTATCAATGTTTTTGTCTATAATTTAAATCAGGAAGAGAATCAGGTCTGCAGACAAT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168575818 402 - 198365852 AAATTTCCTTTTTGCGATTTAAATGAGAGGTTAACTCTTTTGTTAAGCACTGAGCCCC-CTCAGGT-GTCACCCATTCCCTCTTCTGTGT-----------------------TCCCAGGCCCTCTGGAAACCTACTACTTATTTTCTTTCGTCACATAGTACTATAATTTGGCATTTATTTTTCTGCCTGTTTTACTAGGCCCAGAGAACCTAGGGATCAGAGACAAATtattagtatcagtattagtattagt------attaatatcagtattTACAGGCATGGTACCTATATGGGAacctggaactctgcaagcattcaataaatgtgtttttaataaataaatGAGCAAAAGTGTCTCTAAAGCCTCCACGTTATTAATGTTTTTGTCAATAATTTAAATCAGGAAGAGAATCAGGTCTGTAGACAAT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162239574 402 - 192294377 AAATTTCCTTTTTGCgatttaaatgagaggttaactcttttgttaagcactgagcccc-ctcaggt-gtcacccattccctcttctgtgt-----------------------tcccaggccctctggaaacctactacttattttctttcgtcacatagtactataatttggcatttatttttctgcctgttttactaggcccagagaacctagggatcagagacaaattattagtatcagtattagtattagt------attaatatcagtatttacaggcatggtacctatatgggaacctggaactctgcaagcattcaataaatgtgtttttaataaataaatGAGCAAAAGTGTCTCTAAAGCCTCCACGTTATTAATGTTTTTGTCAATAATTTAAATCAGGAAGAGAATCAGGTCTGTAGACAAT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150930757 403 - 180432695 aaatttcctttttgagatTTAAATGAGAGGTTAACTCTTTTGTTAAGCACTGAGCCCCACTCAGGT-GTCACCCATTCCCTCTTCTATGT-----------------------TCCCAGGCCCTCTGGAAACCTACCACTTATTTTCTTTCGTCACATAGTACTATAatttggcatttatttttctgcctgttttactAGGCCCAGAGAACCTAGGGATCAGAGACAAATtattagtatcagtattagtattagt------attaatatcagtattTACAGGCATGGTACCTATATGGGAACCTGGAACTCtgcaagcattcaataaatgtgtttttaataaataaatgagcaaaagtGTCTCTAAAGCCTCCACGTTATTAATGTTTTTGTCAATAATTTAAATCAGGAAGAGAATCAGGTCTgtagacaat i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15024784 402 - 90373283 AAATTTCCTTtttgagatttaaatgagaggttaactcttttgttaagcactgagcccc-ctcaggt-gtcacccattccctcttctgtgt-----------------------tcccaggccctctggaaacctactacttattttctttcgtcacatagtactataatttggcatttatttttctgcctgttttactaggcccagagaacctagggatcagagacaaattattagtatcagtattagtattagt------attaatatcagtatttacaggcatggtacctatatgggaacctggaacactgcaagcattcaataaatgtgtttttaacaaataaatGAGCAAAAGTGTCTCTAAAGCCTCCACGTTATTAATGTTTTTGTCAATAATTTAAATCAGGAAGAGAATCAGGTCTGTAGACAAT i chlSab2.chr2 C 0 C 0 s mm10.chr16 78129852 390 + 98207768 AATTTCTCTTTTTGAGTTTTAAT---GAAGTTAAGAACTTTGTTAGGTCTTGAAT----CTCAAGTGGTCCCTCCTCCTCTGTTCAATCTCAAGCACCCCTCTGCCTCTTCTATCCCAAGCAGTATGCTAGCAGACACCTCACTGAC-ATCACCACCTAGTACTATAAATAGACATTTAATTTCCTGCCAACTTTA-TAAGCTC---------------CAGTGACAAATTACTGCTATTGGT-----TATCAGC------GTTCACATATATACTCTGAGGTCCAATAACT------GCACCTGGAACTCTGTTAGTATTTAGCACATGAGACTTCA--TGATAAACCATCAAAGGTGTCATTAGATTCTCCATGTTATTCATGAATTTGTCAAAAGTTTAAATCAGAATCAAAATCAAACCAAAAGACAGT i mm10.chr16 I 2221 C 0 s canFam3.chr31 13828687 348 + 39895921 TAATATATTTTTTGAGATTTAAGCAAGAGATTAGCTCTTATGTTAAGGATCGTGTC---CTCAAAT-GTCACCCACCCCC---------------------------------TCC----------GGAAACCCAC-----------------CACATAGTTCTATAATTAGACATTCATTTTTCCACCTGTTTTACTAGAGCCAGAAA-------GGTTAAAGATATATTCTTAGTATCAGTATTTGTGTTAGT------------ATTTCTATTTAGAGGTGcaacacctaaatggatgcctggaattctgc-agcattcaataaacatttacaaaatgaataaatGAGCAAGAATATCAATAGAGCCTCCATATTATT-ATGTTTTTGTCAGTGATTTAAATCAGAGACTGAGTTAGGCCTGTAGACAAC i canFam3.chr31 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I a score=771.000000 s hg38.chr21_KI270874v1_alt 87041 1 + 166743 G s ponAbe2.chr21 16962748 1 + 48394510 T i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4460384 1 + 32716333 T i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168576220 1 - 198365852 T i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162239976 1 - 192294377 T i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150931160 1 - 180432695 t i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15025186 1 - 90373283 T i chlSab2.chr2 C 0 C 0 s mm10.chr16 78130242 1 + 98207768 C i mm10.chr16 C 0 C 0 s canFam3.chr31 13829035 1 + 39895921 T i canFam3.chr31 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e panTro4.chr21 3699858 802 + 32799110 I a score=127282.000000 s hg38.chr21_KI270874v1_alt 87042 41 + 166743 TTTAAATTGATTTTTGCCAGAGAAG--------TG-------TTTTAAGTTAAATT s panTro4.chr21 3700660 41 + 32799110 tttaaattgATTTTTGCCAGAGAAG--------TG-------TTTTAAGTTAAATT i panTro4.chr21 I 802 C 0 s ponAbe2.chr21 16962749 41 + 48394510 TTTAAATTGATTTTTGCCAGAGAAG--------TG-------TTTTAAGTTAAATT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4460385 41 + 32716333 TTTAAATTGCTTTTTGCAAGAGAAG--------TG-------TTTTAAGTTAAATT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168576221 41 - 198365852 TTTAAATTGATTTTTGCCAAAGAAG--------TG-------TTTTAAGTTAAATT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162239977 41 - 192294377 TTTAAATTGATTTTTGCCAAAGAAG--------TG-------TTTTAAGTTAAATT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150931161 41 - 180432695 tttaaattgatttttgccAAAGAAG--------TG-------TTTTAAGTTAAATT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15025187 41 - 90373283 TTTAAATTGATTTTTGCCAAAGAAG--------TG-------TTTTAAGTTAAATT i chlSab2.chr2 C 0 C 0 s mm10.chr16 78130243 49 + 98207768 TGTAAACTAACTTTGTCAAAAACCGATCACATTAT-------TTTTAAGCTAAATT i mm10.chr16 C 0 I 762 s canFam3.chr31 13829036 48 + 39895921 TTTAAATTAATTTTTTCCAGAGAAG--------CATTTTTGTTTTTAAGTCAAATT i canFam3.chr31 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I a score=1246991.000000 s hg38.chr21_KI270874v1_alt 87083 444 + 166743 GTAATACCTTCAGTTGAAGCATGCATTCCTCTTTCTACAGTCCTGACATC-ACTCTATTTTCTTCTATCTGGCAGTTTCA---AACTCTACTCTTACCTAGACTCTCACAGCAACTGAGTTTTCTACTTCTGGTCTAGATATTACATGAGAAAAAATATCCATTACGTTTACAGGTATAAAATGGGTTGTACATA------GAGAAAAGATATA-TTTTAATAAAAAT-GAAAATAGATATGTACACTTAAGTGGGAAAAGAAGTGAG-AAAAATAGATAAGAAATAATACAGTGTGATCAATTTGTAAAGTAAGTTCTATAACATGATAGTGACATGGTAGCCATTAGAGCATATACTCACTCCACATCTTTAATGAGCATTTAGGCAACAAGCAGAGGCTGACATGGAAAATGGGGAAAGGGTTCCCAGGATGGCCACCAAGATGATTCAAGGTT s panTro4.chr21 3700701 444 + 32799110 GTAATACCTTCCGGCAAAGCATGCATTCCTCTTTCTACAGTCCTGACATC-ACTCAATTTTCTTCTATCTGGCAGTTTCA---AACTCTACTCTTACCTAGACTCTCACAGCAACTGAGTTTTCTACTTCTGGTCTAGATATTACATGAGAAAAAATATCCATTATGTTTACAGGTATAAAATGGGTTGTACATA------GAGAAAAGATATA-TTTTAATAAAAAT-GAAAATAGATATGTACACTTAAGTGGGAAAAGAAGTGAG-AAAAATAGATAAGAAATAATACAGTATGATCAATTTGTAAAGTAAGTTCTATAACATGATAGTGACATGGTAGCCATTAGAGCATATACTCACTCCACATCTTTAATGAGCATTTAGGCAACAAGCAGAGGCTGACATGGAAAATGGGGAAAGGGTTCCCAGGATGGCCACCAAGATGATTCAAGGTT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16962790 445 + 48394510 GTAATACCTTCAGGTGAAGCATGCATTCCTCTTTCTACAGTCCTGACATC-ATTCTATTTTCATCTATCTGGCAGTTTCA---AACTCTACTCTTACCTAGACTCTCACAGCAACTGAGTTTTCTACTTCTGGTCTACTTATTACATGAGAAAAAATATCCATTATGTTTACAGTTATAAAATGGGTTGTACATA------GAGAAAAGatatatttttaataaaaat-taaaataGATATGTACACTTAAGTGGGAAAAGAAGTGAG-AAAAATAGATAAGAAATAATACAGTATGATCAATTTGTAAAGTAAGTTCTATAACATGATAGTGACATGGTAGCCATTAGAACATATACTGACTCCACATCTTTAATGAGCACCTAGGCAACAAGCAGAGGCTgacatggaaaatggggaaagagttcccaggatggccaccaagatgattcaaggtt i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4460426 444 + 32716333 GTAATACCTTAAGGTGAAGCATGCATTCCTCTTTCTACAGTCCTGACATC-ACTCTATTTTCTTCTATCTGGCAGTTTCA---AACTCTACTCTTACCTAGACCCTCACAGCAACTGAGTTTTCTACTTCTGGTCTAGATATTACATGAGAAAAAATATCCATTATGTTTACAGGTATAAAATGGGTTGTACATA------GAGAAAAGATATA-CTTTAATAAAAAT-GAAAATAGATACGTACACTTAAGTGGGAAAAGAAGTGAG-AAAAATAGATAAGAAATAATACAGTATGATCAATTTGTAAAGTAAGTTCTATAACATGATAGTGACATGGTAGCCACTAGAGCATATACTCACTCCACATCTTTAGTGAGCATCTAGGCAACAAGCAGAGGCTGACATGGAAAATGGGGAAAGGGTTCCCAGGGTGGCCACCAAGATGATTCAAGGTT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168576262 445 - 198365852 GTAATGCCTTCAGGTGAAGCACGCCTTCCTCTTTCTACAGTCCTGACATC-ACTCTATTTGCTTCTATCTGGCAGCTTCA---AACTTTACTCTCACTTAGACTCTCACAGCAACTGAGTTTTCTACTTCTGGTCTAGATATTACATGAGGAAGAATATCCATTATGTTTACAGGTATAAAATGGGTTGTACATA------GAGAAAAGATATA-CTTTAATAAAAAT-GAAAATAGATATGCACACTTAAGTGGGAAAAGAAATGAGAAAAAATAGATAAGAAATAATACAGTATGATCAATTTGTAAAGCAAGTTCTATAACATGATAGTGACATGGTAGCCATTAGAGCATATACTCACTCCACATCTTTAATGAGCATCTAGGTAACAAGCAGAGGCTgacatggaaaatggggaaagggttcctaggatggccaccgagatgattcaaggtt i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162240018 444 - 192294377 GTAATGCCTTCAGGTGAAGCACGCCTTCCTCTTTCTACAGTCCTGACATC-ACTCTATTTGCTTCTATCTGGCAGCTTCA---AACTTTACTCTCACTTAGACTCTCACAGCAACTGAGTTTTCTACTTCTGGTCTAGATATTACATGAGGAAGAATATCCATTATGTTTACAGGTATAAAATGGGTTGTACATA------GAGAAAAGATATA-CTTTaataaaaat-gaaaatagatatgcacacttaagtgggaaaagaaatgag-aaaaatagataagaaataATACAGTATGATCAATTTGTAAAGCAAGTTCTATAACATGATAGTGACATGGTAGCCATTAGAGCATATACTCACTCCACATCTTTAATGAGCATCTAGGTAACAAGCAGAGGCTgacatggaaaatggggaaagggttcctaggatggccaccgagatgattcaaggtt i macFas5.chr3 C 0 I 302 s papAnu2.chr3 150931202 444 - 180432695 GTAATGCCTTCAGGTGAAGCATGCATTCCTCTTTCTACAGTCCTGACATC-ACTCTATTTGCTTCTATCTGGCAGCTTCA---AACTCTACTCTTACTTAGACTCTCACAGCAACTGAGTTTTCTACTTCTGGTCTAGATATTACATGAGGAAGAATATCCATTATGTTTGCAGGTATAAAATGGGTTGTACATA------GAGAAAAgatata-ctttaataaaaat-gaaaatagatatgCACACTTAAGtgggaaaagaaatgag-aaaaatagataagaaataatacagtaCGATCAATTTGTAAAGCAAGTTCTATAACATGATAGTGACATGGTAGCCAATAGAGCATATACTCACTCCACATCTTTAATGAGCATCTAGGTAACAAGCAGAGGCTGACATggaaaatggggaaagggttcctAGGATGGCCACCGAGATGATtcaaggtt i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15025228 444 - 90373283 GTAATGCCTTCAGGTGAAGCATGCATTCCTCTTTCAACAGTCCTGACATC-ACTCTATTTGCTTCTATCTGGCAGCTTCA---AACTCTACTCTTACTTAGACTCTCACAGCAACTGAGTTTTCTACTTCTGGTCTAGATATTACATGAGGAAGACTATCCATTATGTTTACAGGTATAAAATGGGTTGTACATA------CATAAAAGATATA-CTTTaataaaaat-gaaaatagatatgcacacttaagtgggaaaagaaatgag-aaaaatagataagaaataatatagTATGATCAATTTGTAAAGCAAGTTCTATAACATGATAGTGACATGGTAGCCATTAGAGCATATACTCACTCCACATCTTTAATGAGCATCTAGGTAACAAGCAGAGGCTgacatggaaaatggggaaagggttcctaggatggccaccgagatgattcaaggtt i chlSab2.chr2 C 0 C 0 s canFam3.chr31 13829084 446 + 39895921 TAAATACCTTTAGGTAAAGTACACACTCCTATTTCCAGAGTCC-AATATCAACTCTATTTTCTCTGATCTGGCAGTTTCACACAATTGTTACCTTACT--GCCCCTCACAGTAACTGAGTTTGCTGCTCCTGGAGTATATTTTATAGAAGAAATAAT----ATTACGTTTACAGGTTTAAAATAAGTGGTACACATAGTTTGAAATGAGATGTA-TTTTAATAAAAATCTTAAAAAGATTTGTACACTTATGTGAGGAAAGAAATGAG-AAAAATATACTAGAAATAACATCCCATGATAGATTTTTAAAGTAAGCTTTATAATACAATAGCTATGGAATAGGCAGTAGAGCATATAATCATCCCACATCCTTATTACCCATCTAGACCAAAAAC--AGGCTGACATGGAAAATGTGAGGATGGTTCCCAGGATGGCTGCCAAGATCAGTAGAGGTT i canFam3.chr31 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78130292 762 + 98207768 I a score=2548.000000 s hg38.chr21_KI270874v1_alt 87527 1 + 166743 A s panTro4.chr21 3701145 1 + 32799110 A i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16963235 1 + 48394510 a i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4460870 1 + 32716333 A i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168576707 1 - 198365852 a i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162240764 1 - 192294377 a i macFas5.chr3 I 302 C 0 s papAnu2.chr3 150931646 1 - 180432695 a i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15025672 1 - 90373283 a i chlSab2.chr2 C 0 I 311 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13829530 0 + 39895921 C e mm10.chr16 78130292 762 + 98207768 I a score=2548.000000 s hg38.chr21_KI270874v1_alt 87528 1 + 166743 A s panTro4.chr21 3701146 1 + 32799110 A i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16963236 1 + 48394510 a i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4460871 1 + 32716333 A i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168576708 1 - 198365852 a i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162240765 1 - 192294377 a i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150931647 1 - 180432695 a i papAnu2.chr3 C 0 I 312 s chlSab2.chr2 15025984 1 - 90373283 a i chlSab2.chr2 I 311 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13829530 0 + 39895921 C e mm10.chr16 78130292 762 + 98207768 I a score=31332.000000 s hg38.chr21_KI270874v1_alt 87529 12 + 166743 AAAAGAAAACCT s panTro4.chr21 3701147 12 + 32799110 AAAAGAAAACCT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16963237 12 + 48394510 aaaagaaaacct i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4460872 12 + 32716333 AAAAGAAAACCT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168576709 12 - 198365852 aaaagaaaacct i rheMac3.chr3 C 0 I 1732 s macFas5.chr3 162240766 12 - 192294377 aaaagaaaaCCT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150931960 12 - 180432695 aaaagaaaacct i papAnu2.chr3 I 312 C 0 s chlSab2.chr2 15025985 12 - 90373283 aaaagaaaaCCT i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13829530 0 + 39895921 C e mm10.chr16 78130292 762 + 98207768 I a score=2422645.000000 s hg38.chr21_KI270874v1_alt 87541 1402 + 166743 GGtccaaataggaagagaggaagtcaaattgtccctgtttgcaggtgacatgattgtatgtttagaaaaccccatcatcccagcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtccaaaaatcacaaacattcctatacaccaataatagacaaacagagaaccaaatcatgagtgaactcccattcacaattgctactaagagaataaaatacctagggataaaatttacaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaagaaaataagagaggacacaaacaaatggaaaaaca-ttctatgctcacagataggaagaagcaatatcatgaaaatggtcatactgcccaaagtaatttatagatcaatgctatccctgtcaagctaccactgactttcttcacagaattggaaaaaactactttaaacttcatatggaaccaaaaaagagcccccatagccaagacaatactaag-aaaaagaacaaagctggaggcgtcatgctatctgacttcaaattatactacaaggctacagtaaccaaaacagcaatggtactggtaccaaaacagatatatagatcaatggaacacaacagagccctcagaaataatgccacacatctacaaccatctgatctttgacaaacctgacaaaaacaagcaatggggaaaagattccctacttaataaatgttggaaaaactggctagccctatgcagaaaactgaaactggaccccttccttacactttatacaaaaatcaactcaagatggatcaaagacttaaatgtaagacctaggaccataaatatcctagaagaaaacctgggcaataccattcaggacataggcatgggcgaggacttcatgactaaaacaccaaaagcaatggcaacaaaggccaaaattgacaaatgggatctaattaaactaaagagattctacacagcaaaagaaaccaccatcagagtgaacaggcaacctacagaatgggagaaaaattttgcaatctatccatctgacaaagggctaat----agaatctacaattaacttaagcaaatttacaagaaaaaaaaa----caaacaaccccatcaaaaagtgggcaaaggatatgaacagacacttctcaaaagaagacatttatgcagccaacagacacatgaaaaaatgctcatcatcactggtcatcagagaaatgcaaatcaaaaccccagtgagataccatctcacaccagttagaatggcgatcatt-aaaaagtcaggaaacaacagatgatggagaggatgtggagaaataggagcacttttacactgttggtgggagtgtaaactagttcaaccattgtggaagaca s panTro4.chr21 3701159 1406 + 32799110 GGtccaaataggaagagaggaagtcaaattgtctctgtttgcaggtgacatgattgtatatttagaaaaccccatcatcccagcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtccaaaaatcacaagcattcctaaacaccaataatagacaaacagagaaccaaatcatgagtgaactcccattcacaattgctactaagagaataaaatacctagggataaaatttacaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaagaaaataagagaggacacaaacaaatggaaaaaca-ttctatgctcacagataggaagaagcaatatcatgaaaatggtcatactgcccaaagtaatttatagatcaatgctatccctgtcaagctaccactgactttcttcacagaattggaaaaaactactttaaacttcatatggaaccaaaaaagagcccccatagccaagacaatactaag-aaaaagaacaaagctggaggcatcacgctatctgacttcaaattatactacaaggctacagtaaccaaaacagcaatggtactggtaccaaaacagatatatagatcaatggaacacaacagagccctcagaaataatgccacacatctacaaccatctgatctttgacaaacctgacaaaaacaagcaatggggaaaagattccctatttaataaatgttggataaactggctagccctatgcagaaaactgaaactggaccccttccttacactttatacaaaaatcaactcaagatggatcaaagacttaaatgtaagacgtaggaccataaatatcctagaagaaaacctgggcaataccattcaggatgtaggcacgggcaaagacttcatgactaaaacaccaaaagcaacagcaacaaaggccaaaattgacaaatgggatctaattaaactaaagagattctacacagcaaaagaaactatcatcagaatgaacaggaaacctacagaatgggagaaaatttttgcaatctatccatctgacaaagggctaat----agaatctacaattaacttaagcaaatttacaagaaaaaaaaaaaaacaaacaaccccatcaaaaagtgggcaaaggatatgaacagacacttctcaaaagaagacatttatgcagccaacagacacatgaaaaaatgctcatcatcactggtcatcagagaaatgccaatcaaaaccccagtgagataccatctcacaccagttagaatggcgatcatt-aaaaagtcaggaaacaacagatgatggagaggatgtggagaaataggagcacttttacactgttggtgggagtgtaaactagttcaaccattgtggaagaca i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16963249 1395 + 48394510 GGtccaaataggaagagaagaagtcaaattgtctctgtttgcaggtgacatgattgtatatttagaaaaccccatcgtcccagcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaatcacaagcattcctatacaccaataatagacaaacagagaaccaaatcatgagtgaactcccactcaaaattgctactaagagaataaaatacctagggatacaatttacaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaagaaaataag-gaggacacaaacaaatggaaaaaca-ttctatgctcacagataggaagaagcaatatcatgaaaatagtcatactgcccaaagtaatttatagatcaatgctatccccatcaagctaccactgattttcttcacagaattggaaaaaactactttaaacttcatatgaaaccaaaaaagagcccccatagccaagataatactaag-aaaaagaacaaagctggaggcatcatgctatctgacttcaaattatactacaagggtacagtaaccaaaacagcaatggtactggtaccaaaacagacatgtagatcaatggaacacaacagagccctcagaaataatgccacacatctacaaccaactgatctttgacaaacctaacaaaaacaagcaatggggaaaagattccctatttaataaatgttggaaaaactggctagccctatgcagaaaagtgaaactggaccccttccttacaccttatacaaaaatcaactcaagatgaatcaaagacttaaatgtaagacctaggaccataaaaatcctagaagaaaacctgggcaataccattcaggatgtaggcatgggcaaagacttcatcactaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgagatctaat-----taaagagattctacacagcaaaagaaactatcatcagagtgaacaggaaacctacagaatgggagaaaatttttgcaatctatccatctgacaaagggctaatatccagaatctacaaataacttaagcaaatttacaagaaaaaaaag-------acaaccccatcaaaaagtgggcaaaggatatgaacagacacttctcaaaagaagacatttatgcagccaacagacacatgaaaacatgctcatcatcactggtcatcagagaaatgcaaatcaaaaccacaatgagataccatctcacaccagttagaatggcgatgatt-aaaaagt--ggaaacaacagatgctggagaggatgtggagaaataggagtgcttttacactgttggtgggagtgtaaatgagttcaaccattgtggaagaca i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4460884 1405 + 32716333 GGtccaaataggaagagaggaagtcaaattgtctctgtttgcaggtgacatgattgtatatttagaaaacgccatcatcccagcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgttcaaaaatcacaagcattccaatacaccaataacagacaaacagagaaccaaatcatgagtgaactcccattcacaattgctactaaaagaataaaatacctagggatacaatttacaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaaggaaataagagaggacacaaacaaatggaaaaaca-ttctatcctcatggataggaagaagcaatatcttgaaaatggccatactgcccaaagtaatttatagatcaatgctatccccatcaagctaccactgactttcttcacagaattggagaaaactactttaaacttcatatggaaccaaaaaagagcccacatagccaagacaatactaagccaaaagaacgaagctggaggcatcacgctatctgacttcaaattatactacaaggccacagtaaccaaaacagcaatggtactggtaccaaaacagatatatagaccaatggaacacaacagagccctcagaaataacgccacacatctacaaccatctgatctttgacaaacctgacaaaaacaagcaatggggaaaagattccctatttaataaatgttggaaaaactggctagccctatgcagaaaactgaaactggaccccttccttacaccttatacaaaaatcaactcaagatggatcaaagacttaaatgtaagacctagaaccataaaaatcctagaagaaaacctatgcaataccattca-gacgtaggcatggccaaagacttcatgactaaaacaccaaaagcaatggcaacaaaggccaaaattgacaaatgggatctaattaaactaaagagattctacacagcaaaagaaactatcatcagagtgaacaggaaacctacagaatgggagaaaatttttgcaatctatccatctgacaaagggctaatatccagaatctacaaataacttaagcaaatttacaagaaaaaaaaa----caaacaaccccatcaaaaagtgggcaaaggatatgaacagacaattctcaaaagaagacatttatgcagacaacagacatatgaaaaaatgctcatcatcactggtcatcagagaaatgcaaatcaagaacataatgagataccatctcgtgccaattagaatggcaatcatt--aaaagtcaggaaacaacagatgctggagaagatgtggagaaataggaaggcttttacactgttggtgggactgtaaactagttcaaccattgtggaagaca i nomLeu3.chr25 C 0 I 141 s macFas5.chr3 162240778 1377 - 192294377 AGtccaaataggaagagaggaagtcaaatcatctctgtttgcaggtgacatgattgtatatttagaaaaccccatcgtcccagccccaaatcttgttaagctgacaagcaacttcagtaaagtctcaggatacaaaatcaatgtccaaaaatcacaaccattcctatacaccaataatagacaaacagagagccaaatcatgagtgaactcccattcgcaattgctactaagagaataaaatacctaggtatacaatttacaagggatgtgaaggacctcttcaaggagaactacaaatcactgctcaagaaaataaaagaggacacaaacaaatggaaaaacatttccatgctcatggataggaagaagcaatatcgtgaaaatgtccataccgcccaaagtaatttatagatcaatgctatccccatcaagctaccaatgacttgcttcacagaattggaaaaaaatactttaaacttcatatggaaccaaaaaagagcctgcatagccaagacaatactaagcaaaaagaacaaaactggaggcatcatgctatctgacttcaacttatactacaaggctacagtaaccaaaacagc-atggtactggtaccaaaacagagttatagaccaatggaatagaacagaggcctcagaaataataccacacatctacaaccatctgatctttgacaaacctggca-----aagcaatggggaaaagattccctatttaataaatgttggaaaaactggccagccttatgcagaaaa------------------cttataccttatataaaaatcaactcaagatggatcaaagactt-gatctaggaactaggaccataaaaatcctagaagaaaacctgggcaataccattcaggatgtaggcatgggcaaagacttcatgactaaaacaccaacagcaatggcaacaaaggccaaaattgacaaatgagatctaactaaactaaagagcctctgcacagcaaaagaaactatcatcagagtgaacagacaacctacagaatgggagaaaatttttgcaatctatccatctgacaaaggactaatatccagaatctagaaataacttaggcaaatttacaagaaaaaaaaa-----------acacatcaaaaagtgggcaaaggatatgaatagacacttttcaaaggaagatatttatgcagccaacagacatatgaaaaaatgctcatcatcactggtcatcagagaaatgcagatcaaaaacacaatgagatacaatctcatgccagttagaatggcgatcattaaaaaagtcagggaacaacagatgctggagaagatgtggagaaataagaaggcttttacactgttggtgggactgtaaactagttcaaccattgtggaatata i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150931972 1374 - 180432695 agtccaaataggaagagaggaagtcaaatcatctctgtttgcaggtgacatgattgtatatttagaaaaccccatcatcccAGCCCCAAATCTtgttaagctgacaagcaacttcagtaaagtctcaggatacaaaatcaatgtccaaaaatcacaaccattcctatacaccaacaatagacaaacagagagccaaatcatgagtgaactcccattcacaattgctactaaaagaataaaatacctaggtatacaatttacaagggatgtgaaggacctcttcaaggagaactacaaatcactgctcaagaaaataaaagaggacacaaacaaatggaaaaacatttccatgctcatggataggaagaatcaatatcgtgaaaatgtccatactgcccaaagtaatttatagatcaatgctatccccatcaagctaccaatgacttgcttcacagaattggaaaaaaatactttaaacttcatatggaaccaaaaaagagcccgcatagccaagacaatactaagcaaaaagaacaaaactggaggcatcatgctatctgacttcaacttatactacaaggctacagtaaccaaaacagc-atggtactggtaccaaaacagagttatagaccaatggaatagaacagaggcctcagaaataataccacacatctacaaccatctgatctttgacaaacctggca-----aagcaatggggaaaagattccctatttaataaatgttggaaaaactggctagccttaTGCAGAAAA------------------Cttataccttatataaaaatcaactcaagatggatcaaagactt-gaTCTAGGAactaggaccataaaaatcctagaagaaaacctgggcaataccattcaggatgtaggcatgggcaaagacttcatgactaaaacaccaacagcaatggcaacaaaggccaaaattgacaaatgagatctaactaaactaaagagcctctgcacagcaaaagaaactatcatcagagtgaacagacaacctacagaatgggagaaaatttttgcaatctatccatctgacaaaagactaatatccagaatctagaaaTAACTTaggcaaatttacaagaaaaaaaa--------------acatcaaaaagtgggcaaaggatatgaatagacacttttcaaaagaagatatttatgcagccaacagatatatgaaaaaatgctcatcatcactggtcatcagagaaatgcagatcaaaaacacaatgagatacaatctcatgccagttagaatggtgatcattaaaaaagtcagggaacaacagatgctggagaagatgtggagaaataagaaggcttttacactgttggtgggagtgtaaattagttcaaccattgtggaatata i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15025997 1381 - 90373283 AGtccaaataggaagagaggaagccaaatcatctctgtttgcaggtgacatgattgtatatttagaaaaccccatcgtctcagccccaaatcttgttaagctgacaagcaacttcagtaaagtctcaggatacaaaatcaatgtccaaaaatcacaagcattcctatacaccaataatagatcaacagagagccaaatcatgagtgaactcccattcacaattgctactaagagaataaaatacctaggtatacaatttacaagggatgtgaaggacctcttcaaggagaactacaaatcactgctcaagaaaataaaagaggacacaaacaaatggaaaaacatttccatgctcatggataggaagaagcaatatcgtgaaaatgtccatactgcccaaagtaatttatagatcaatgctatccccatcaagctaccaatgacttgcctcacagaattggaaaaaaatactttaaacttcatatggaaccaaaaaagagcccacatagccaagacaatactaagaaaaaggaacaaaactggaggcatcatgctatctgacttcaacttatactacaaggctacagtaaccaaaacagc-atggtactggtaccaaaacagagatacagaccaatggaatagaacagaggcctcagaaataataccacacatctacaaccatctgatctttgacaaacctggca-----aagcaatggggaaaagattccctatttaataaatgttggaaaaactggctagccttatgcagaaaa------------------cttataccttatataaaaatcaactcaagatggatcaaagactt-gatctaggaactaggaccataaaaatcctagaagaaaacctgggcaataccattcaggatgtaggcatgggcaaagacttcatgactaaaacaccaacagcaatggcaacaaaggccaaaattgacaaatgggatctagttaaactaaagaggttctgcgcagcaaaagaaactatcatcagagtgaacagacaacctacagaatgggagaaaatttttgcaatctatccatctgacaaaggactaatatccagaatctagaaataacttaggcaaatttacaagaaaaaaaaa-------acacacacatcaaaaagtggacaaaggatatgaatagacacttctcaaaagaagatatttatgcagccaacagacatatgaaaaaatgctcatcatcactggccatcagagaaatgcagatcaaaaacacaatgagatacaatctcatgccagttagaatggcaatcattaaaaaagtcagggaacaacagatgctggagaagatgtggagaaataagaaggcttttacactgttggtgggagtgtaaattagttcaaccattgtggaatata i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13829530 0 + 39895921 C e mm10.chr16 78130292 762 + 98207768 I e rheMac3.chr3 168576721 1732 - 198365852 I a score=301982.000000 s hg38.chr21_KI270874v1_alt 88943 192 + 166743 gtgtggtgattcctcaaggatctagagctagaaataccatttgacacagt---gatcccattactgggtatatacccaaaggattataaaacatgctactacaaagacacattcatgtatatgtttattgcggcactattcacaatagcaaagacttggaaccaacccaaatgtccatcagtgatagactagatt s panTro4.chr21 3702565 192 + 32799110 gtgtggtgattcctcaaggatctagagctagaaataccatttgacacagt---gatcccattactgggtatatacccaaaggattataaatcatgctactacaaagacacattcatgtatatgtttattgcagcactattcacaatagcaaagacttggaaccaacccaaatgtccatcagtgatagactagatt i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16964644 192 + 48394510 gtgtggtgattcctcaaggatctagagctagaaataccatttgacccagt---gatcccattactgggtatatacccaaaggattataaatcatgctactacaaagacacattcatgtatatgtttattgcggcactattcacaatagcaaagacttggaaccaacccaaatgtccatcagtgatagactagatt i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4462430 191 + 32716333 ctgtggcgattccgcgggtatatagagggtcgaatactatttgggccggcttgggta----tactgggtatatacccaaatggtttggggtcattctactgtaaagacacatgcacacatatgtttattgtggcactattcacagcagcaaagacgtggaaccaacccaaatgtccttcaataatagactggata i nomLeu3.chr25 I 141 C 0 s macFas5.chr3 162242155 192 - 192294377 gtgtggtgattcctcaaggatctagaacaagaaataccatttggcccagc---aatctcattactgggtatatacccaaaagattataagtcattctactataaagacacatgcacacgtatgtttattgtggcactattcacaatagcaaagacgtggaaccaacccaaatgtccatcaataatagactgaata i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150933346 192 - 180432695 gtgtggtgattcctcaaggatctagaacaagaaataccatttggcccagc---aatctcattactgggtatatacccaaaagattataagtcattctactataaagacacatgcacacgtatgtttattgtggcactattcacaatagcaaagacgtggaaccaacccaaatgtccatcaataatagaccgaata i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15027378 192 - 90373283 gtgtggtgattcctcaaggatctagaactagaaataccatttggcccagc---aatctcattactgggtatatacccaaaagattaaaagtcattctactataaagacacatgcacatgtatgtttattgtggcactattcacaatagcaaagacatggaaccaacccaaatgtccatcaataatagactggata i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13829530 0 + 39895921 C e mm10.chr16 78130292 762 + 98207768 I e rheMac3.chr3 168576721 1732 - 198365852 I a score=886000.000000 s hg38.chr21_KI270874v1_alt 89135 377 + 166743 aagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaaggataagttcatgtccttttcagggacatgaatgtagctggaaaccatcactctcagcacactaacacaagaacagaaaaccaaacactgcgtgttctcacaagtgggaggtgaacaatgagaacacatggacatagggagaggaacatcacacaccagggcttgttggggagtggggggctaggggagggataacattagcagaaatacctaatgtagatgatgggttgatgggtgcagcaaactaccatggcacgtgtatacctatgtaacaaaactgcacattctgcacatgtacccctgaacttaaagtataat------aaaaattaa s panTro4.chr21 3702757 377 + 32799110 aagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaaggataagttcatgtccttttcagggacatgaatgtagctggaaaccatcattctcagcacactaacacaagaacagaaaaccaaacactgcgtgttctcacaagtgggaggtgaacaatgagaacacatggacatagggagaggaacatcacacaccagggcttgttggggagtggggggctaggggagggataacattagcagaaatacctaatgtagatgatgggttgatgggtgcagcaaactaccatggcacgtgtatacctatgtaacaaaactgcacattctgcacatgtacccctgaacttaaagtataat------aaaaattaa i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16964836 376 + 48394510 aagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaaggataagttcatgtcatttgcagggacatgaatgtagctggaaaccatcattctcagcacactaacacaagaacagaaaaccaaacactgcatgttctcataagtgggaggtgaacaatgagaacacatggacatagggagaggaacatcacacaccagggcttgttggggggt-gggggctaggggagggataacattaggagaaatacctaatgtagatgatgggttgatgggtacaccaaaccaccatggcacgtgtataactatgtaacaaaactgcacgttctgcacatgtacccctgaacttaaagtataat------aaaaattaa i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4462621 378 + 32716333 aaggaaatgtggcacatatacaccatggaatactatgcagccat-aaaaaggataagttcatgtcctttgcagggacatggatatagttggaaaccatcattctcagcaaactaacacaagaacaaaaaaccaaacaccgcatgttctcataagtgggaggtgaacaatgagaacacatggacatagagagaggaacatcacacaccacggcttgtt-gggagtggggggctaggggagggataacattaggagaaatacctaatgtagatgatgggttgatgaatgcagcaaaccaccatggcaagtgtatacctgtataacaaaactgcatgttctgcacatgtacctctgaacttaaagtataat---aaaaaaaaTGTA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168578453 380 - 198365852 aagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaaggacaagttcatgtcctttgcagggatgtggatgtagctggaaaccatcattctcagcaaactaacacaagaacagaaaaccaaacatcgcatgttctcataaatgggaggtgaaaaatgagagcacatggacatagggagaggaacatcacacaccagggcttatt-gggggtagggggctaggggagggataacattaggagaaatacctaatgtagatgatgggttgatgggtgcagcaaaccaccatggcacgtgtatacctacataacaaaactgcacattctgcacatgtacccctgaacttaaagtataat--aaagaaaaaTTTT i rheMac3.chr3 I 1732 C 0 s macFas5.chr3 162242347 382 - 192294377 aaggaaatgtggcacatatacaccatggaatactatgcagccataaaaaaggacaagttcatgtcctttgcagggatgtggatgtagctggaaaccatcattctcagcaaactaacacaagaacagaaaaccaaacatcgcatgttctcataaatgggaggtgaaaaatgagagcacatggacatagggagaggaacatcacacaccagggcttatt-gggggtagggggctaggggagggataacattaggagaaatacctaatgtagatgatgggttgatgggtgcagcaaaccaccatggcacatgtatacctacgtaacaaaactgcacattctgcacatgtacccctgaacttaaagtataataaaaaaaaaaaTTTT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150933538 379 - 180432695 aaggaaatgtggcacatatacaccatggaatactatgcagccataaaaaaggataagttcatgtcctttgcagggatgtggatgtaactggaaaccatcattctcagcaaactaacacaagaacagaaaaccaaacatcgcatgttctcataAATGGGAGGTGAaaaatgagagcacatggacatagggagaggaacatcacacaccagggcttatt-gggggtagggggctaggggagggataacattagaagaaatacctcatgtagatgatgggttgatgggtgcagcaaaccaccatggcacgtgtatacctacgtaacaaaactgcacattctgcacatgtacccctgaacttaaagtataat--aaaaaaaaa-ttt i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15027570 379 - 90373283 aaggaaatgtggcacatatacaccatggaatactatgcagccataaaaaaggataagttcatgtcccttgcagggatgtggatgtagctggaaaccatcattctcagcaaactaacacaagaacagaaaaccaaacatcgcatgttctcataaatggaaggtgaaaaatgagagcacatggatatagggagaggaacatcacacaccagggcttatt-gggggtagggggctaggggaaggataacattaggagaaatacctgacgtagatgatgggttgatgggtgcagcaaaccaccatggcatgtgtatacctgtgtaacaaacctgcacattctgcacatgtatcccagaacttaaagtataat--aaaaaaaaa-TTT i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13829530 0 + 39895921 C e mm10.chr16 78130292 762 + 98207768 I a score=1001201.000000 s hg38.chr21_KI270874v1_alt 89512 373 + 166743 aaaaGAGAAAACCTGGTCATGAAGAGTTTCTCCAAGGAAGACC--AGAGAATCATGTGATGTGGCTATTTCTAAAGATGGACCAGGTTGAGCAGAAGTGGTATCACTGTTCACTTTAGA--------CAGAGCTCTGAACACAGGAGGGGAAGAAAATTTTTAAAAGAAAAAGATCCAAAATTTTTTAAAAGAAGAA-TTGTAAATTGGCAAACTCTGTTAAAGAAAGAACCAAAAGAAGGTGAGTTTTTGGGAGCATTCTAAAGACAGTCCTC--TAATTAAATAAGCCATCAGATTCTTTCAGTGAGGATAATCATGGCTGAGAGGAGAGTTCCAATAGTCCCCACCCCAGTTTAGAGATCACATTCAAATAAGCAAACTCTGT s panTro4.chr21 3703134 373 + 32799110 aaaaGAGAAAACCTGGTCATGAAGAGTTTCTCCAAGGAAGACC--AGAGAATCATGTGATGTGGCTATTTCTAAAGATGGACCAGGTTGAGCAGAAGTGGTATCACTGTTCACTTTAGA--------CAGAGCTCTGAACACAGGAGGGGAAGAAAATTTTTAAAAGAAAGAGATCCAAAATTTTTTAAAAGAAGAA-TTGTAAATTGGAAAACTCTGTTAAAGAAAGAACCAAAAGAAGGTGAGTTTTTGGGAGCATTCTAAAGACACTCCTC--TAATTAAATAAGCCATCAGATTCTTTCAGTGAGGATAATCATGGCTGAGAGGAGAGTTCCAATAGTCCCCACCCCAGTTTAGAGATCACATTCAAATAAGCAAACTCTGT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16965212 373 + 48394510 aaaaGAGAAAACCTGGTCATGAAGAGTTTCTCCAAGGAAGACC--AGAGAATAACGTGACGTGGCTGTTTCTAAAGATGGACCAGGTTGAGCAGAAGTTGTATCACTGTTCACTTTAGA--------CAGAGCTCTGAACACAGGAGGGGAAGAAAATTTTTAAAAGAAAAAGATCCAAAAATTTTTAAAAGAAGAA-TTGTAAATCGGCAAACTCTGTTAAAGAAAGAACTGAAAGAAGGTGAGTTTTTGGGAGCATTCTGAAGTCACTCCTC--TAATTAAATAAGCCATCAGATTCTTTCAGTGAGGATAATCATGGCTGAGAGGAGAGTTCCAATAGTACCCACCCCAGTTTAGAGATCACATTCAAATAAGCAAACTGTGT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4462999 373 + 32716333 AAAAGAGAAAACCTGGTCATGAAGAGTTTCTCCAAGGAAGACC--AGAGAATCATGTGATGTGGCTATTTCTAAAGATGGACCAGGATGAGCAGAAGTGGTATCACTGTTCACTTTAGA--------CAGAGCTCCGAATGCAGGAGGGGAAGAAAATTTTTAAAAGAAAAAGATCCAAAAATTTTTAAAAGAAGAA-TTGTAAATTGGCAAACTCTGTTAAGGAAGGAACCGAAAGAAGGTGAGTTTTTGGGAGCACTCTGAAGACACTCCTC--TAATTAAGTAAGCCATCAGATTCTTTCAGTGAGGATAATCATGGCTGAGAGGAGAGTTCCAGTAGTCCCCACCCCAGTTTAGAGATCACATTGAAATAAGCAAACTGTGT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168578833 373 - 198365852 TAAAGAGAAAACCTGGTCATGAAGAGTTTCTCCAAGGAAGACC--AGAGAATCACGTGATGTAGCTATTTCTAAAGATGGACCAGGATAAGCAGAAGTGGTATCACTGTTCCCTTTAGA--------CACAGCTCTGAACAAAGGAGGGGAAGAAAATTTTTAAAAGAAAAAGATCCAAAAATTTTTAAAAGTAGTA-TTGTAAACTGACAAACTCTGTTAAAGAAAGAATCAAAAGAAGGTGAGCTTTTGGGAGAGTTCTGAAGACACTTCTC--AAATTAAATAAGCCATAAGATTATTCCAGTAAGGATAATCATGGCTGAGAGGAGAGTTCCAATGGTCTCCACTCCCGTTTAGAGATCACATTCAAATAGGCAAACTGTGT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162242729 373 - 192294377 TAAAGAGAAAACCTGGTCATGAAGAGTTTCTCCAAGGAAGACC--AGAGAATCACGTGATGTGGCTATTTCTAAAGATGGACCAGGATAAGCAGAAGTGGTATCACTGTTCCCTTTAGA--------CACAGCTCTGAACAAAGGAGGGGAAGAAAATTTTTAAAAGAAAAAGATCCAAAAATTTTTAAAAGTAGTA-TTGTAAACTGACAAACTCTGTTAAAGAAAGAATCAAAAGAAGGTGAGCTTTTGGGAGCGTTCTGAAGACACTTCTC--AAATTACATAAGCCATAAGATTATTCCAGTAAGGATAATCATGGCTGAGAGGAGAGTTCCAATGGTCTCCACTCCCGTTTAGAGATCACATTCAAATAGGCAAACTGTGT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150933917 373 - 180432695 taaagagaaaacctGGTCATGAAGAGTTTCTCCAAGGAAGACC--GGAGAATCACGTGATGTAGCTATTTCTAAAGATGGACCAGGATAAGCAGAAGTGGTATCACTGTTCCCTTTAGA--------CACAGCTCTGAACAAAGGAggggaagaaaatttttaaaagaaaaagatccaaaaatttttaaaaatagta-ttgtaAACTGACAAACTCTGttaaagaaagaatcaaaagaaggTGAGCTTTTGGGAGCGTTCTGAAGACACTTCTC--TAATTAAATAAGCCATAAGATTATTCCAGTAAGGATAATCATGGCTGAGAGGAGAGTTCCAATGGTCTCCACTCCCGTTTAGAGATCACATTCAAATAGACAAACTGTGT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15027949 373 - 90373283 TAAAGAGAAAACCTGGTCATGAAGAGTTTCTCCAAGGAAGACG--AGAGAATCACGTGATGTAGCTATTTCTAAAGATGGACCAGGATAAGCAGAAGTGGTATCACTGTTCCCTTTAGA--------CAGAGCTCTGAACAAAGGAGAGGAAGAAAAATTTTAAAAGAAAAAGATCCAAAAATTTTTAAAAGTAGAA-TTGTAAACTGACAAACTCTGTTAAAGAAAGAATCAAAAGAAGGTGAGCTTTTGGGAGCATTCTGAAGACACTTCTC--TAATTAAATAAGCCATAAGATTATTTCAGTAAGGATAATCATGGCTGAGAGGAGAGTTCCAATGGTCTCCACTCCCGTTTAGAGATCACATTCAAATAGGCAAACTGTGT i chlSab2.chr2 C 0 C 0 s canFam3.chr31 13829530 374 + 39895921 AGAAGAGAAAGCCTGATCATGAAGATTATCTCCAACGAAGACTAAAGAGGATTGCATCA------TATTTCTAAAGACGGTAAAGGATGAACAAAAGCAGTGTCACTGTTCATTTAAGACAGCTGGGCAGAGCTCTAGAAACAGGAGGGGTGGAAATTTTTTAAAACAAAA-----CAAAATTGTGAAAAAAAAATAGTTGTAAATAGACGAATTCTGCTAAAGAAAGAACAAAGAAAAGGCACGTTGTAGGCGACATTCTGAGGACACTCCTCTTTGACTAAATAAGTAATCAAGTTATTTGAAC-AGGATAATCACTGCCAAAAGAGGAGTTCCAATAACCATCTGTCCAATTTAGAGAACACGTTCAACTAACGAAACTGTGC i canFam3.chr31 C 0 I 487 e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78130292 762 + 98207768 I a score=777258.000000 s hg38.chr21_KI270874v1_alt 89885 280 + 166743 AAACACATCCTGAGTTCAGGTTTGTTTCCCCAGTACAAAAACAGAGCCAAGGAACAACAAATAAATACTTACTGAATG--TCCTCTACGCTGGGTACCACAATTGATGCTGAAGGACAAGAATTACAAAGAACAAGTTAGAGTCCTTTCTAAGTCAAGTGATCCTGTTTGGTGGTCTCAGACTTTTCTTTTTTACAGCACACAGGTTACATGTAAAACAACTGTTCCATCAGTAATGAGTCTCTTTACAGTAAATGATTTCTGTGAGTCTT-CCCTACTCCCC s panTro4.chr21 3703507 280 + 32799110 AAACACATCCTGAGTTCAGGTTTGTTTCCCCAGTACAAAAACAGAGCCAAGGAACAACAAACAAATACTTACTGAATG--TCCTCTACGCTGGGTACCACAATTGATGCTGAAGGACAAGAATTACAAAGAACAAGTTAGAGTCCTTCCTAAGTCAAGTGATCCTGTTTGGTGGTCTCAGACTTTTCTTTTTTACAGCACACAGTTTACATGTAAAACAACTGTTCCATCAGTAATGAGTCTCTTTACAGTAAATGATTTCTGTGAGTCTT-CCCTACTCCCC i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16965585 280 + 48394510 AAACACAGCCTGAGTTCAGTTCTGTTTCCCCAGTACAAAAACAGAGCCAAGGAACAACAAATAAATACTTACTGGATG--TCCTCTATGCTGGGTACCACAATTGATGCTGAAAGATAAGAATTACAAAGAACAAGTTAGAGTCCTTTCTAAGTCACGTGATCCTGTATGGTGGTCTCAGCCTTTTCTTTTTTACAGCACACAGTTTACATGTAAAACAACTGTTCCATCAGTAATGAGTCTCTTTACAGTAAATGATTTCTGTGAGTCTT-CCCTATTCTCC i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4463372 277 + 32716333 AAACACATCCTGAGTTCAGGTTTGTTTCCCCAGTACAAAAACAGAGCCAAGGAACAACAAATAAATACTTACTGAATG--CCCTCTACACTGGGTACCACAATTGATGCTGAAGG---AGAATTACAAAGAACAAGTTAGAATCCTTTCTAAGTCAAGTGATCCCATATGGTGGTCTCAGCCTTTTCTTTTTTACAGCACACAGTTTACATGTAAAACAACTGTTCCATCAGTAATGAGTCTCTTTACAGTAAATGATTTCTGTGAGTCTT-CCCTACTCCCC i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168579206 280 - 198365852 AAACACACCCTGAGTTCAGGTTTGTTTCCCCAGTACAAAAATAGAGCCAAAGAACAACAAATAAATACTTACTGAATG--TCCTCTATGCTGGATACCACAATTGATGCTGAAGGAGAAGAATTACAAAGAACAAGTTAGAATCCTTTCTAAGACAAGTGATTCTATGTGGTGGTCTCAGCCTTTTCTTTTTTACAGCACATAGTTTATATGTAAAAGAGCTGTTCCATCAGTAATGAATCTCTTTACAGTAAATGATTTCTGCGAGTCTT-CCCTACTCCCC i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162243102 280 - 192294377 AAACACATCCTGAGTTCAGGTTTGTTTCCCCAGTACAAAAATAGAGCCAAAGAACAACAAATAAATACTTACTGAATG--TCCTCTATGCTGGATACCACAATTGATGCTGAAGGAGAAGAATTACAAAGAACAAGTTAGAATCCTTTCTAAGACAAGTGATTCTATGTGGTGGTCTCAGCCTTTTCTTTTTTACAGCACATAGTTTATATGTAAAAGAGCTGTTCCATCAGTAATGAATCTCTTTACAGTAAATGATTTCTGCGAGTCTT-CCCTACTCCCC i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150934290 280 - 180432695 AAACACATCCTGAGTTCAGGTTTGTTTCCCCAGTACAAAAATAGAGCCAAAGAACAAcaaataaatacttactgaatg--tCCTCTATGCTGGGTACCACAATTGATGCTGAAGGAGAAGAATTACAAAGAACAAGTTAGAATCCTTTCTAAGACAAGTGATTCTATGTGGTGGtctcagccttttcttttttacagcACACAGTTTATATGTAAAAGAGCTGTTCCATCAGTAATGAATCTCTTTATAGTAAATGATTTCTGTGAGTCTT-CCCTACTCCCC i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15028322 280 - 90373283 AAACACATCCTGAGTTCAGGTTTGTTTCCCCAGTACAAAAATAGAGCCAAAGAACAACAAATAAATACTTACTGAATG--TCCTCTATGCTGGGTACCACAATTGATGCTGAAGGAGAAGAATTCCAAAGAACAAGTTAGAATCCTTTCTCAGACAAGTGATTCTATGCAGTGGTCTCAGCCTTTTCTTTTTTACAGCACACAGTTTATATGTAAAACAGCTGTTCCATCAGTAATGAAGCTCTTTACAGTAAATGATTTCTGTGAGTCTT-CCCTACTCCCC i chlSab2.chr2 C 0 C 0 s canFam3.chr31 13830391 268 + 39895921 AACCACACCCTGACTTCAGATTTGTTTCCCTAGTACAAAAAGA------------CATTAATAAATAATTACTGAATAGTTCATCTGTGCTAGCTACCAAGACTGGTGCTGAAACA-AAGAACTACAAAGGACAAGCTATAGTCCCCACACAGCTATATGATTCTGTGTAGAGGCCTCAGACTTTTCTTTCTTACAACATATAACTTACATGTAAAACAACTGTTCCATTGGTAAC--ATTTCTTTGCAGTCAATGATTTCCATGAACATTCCCCTACTCctc i canFam3.chr31 I 487 I 304 e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78130292 762 + 98207768 I a score=1297782.000000 s hg38.chr21_KI270874v1_alt 90165 549 + 166743 AAGGGTTCATATCAGAATCTTTGAGAAATCATAATATTTGGGGTATTTTGAAAAGTTTCCACTTTGAGATTCTAATATGTGTCCCTTCTCCAAGGATATACTATCCCTAGTTGAGAATTACGGGTTTGGTGAGGCTTGGCGATGCTTGGGGACTGGAAAACAGAGAAAGAAGTAGAGACTGATATAGCAACTTGTATACTAGATTTAATTACAAAATCATAGCACACAACAAAAACTTGTATACAACAAAGTCATGTATAAAAATCCCTTAAACTTCTGTGAAATACACTATAAATGGTTTCATATATAAAACTATATCCTATAACATCTGTATGTAAATGTGCTATGTATTCAAAGTTAAAGATCATCTATTCCCTTAGACAGTTTATATTCATAAATTATAGCACAAGATTTGACAACTTGAAAAGCTTTAGCAAATGTATGAAAATATCAACTTACTAGGTATTTCTATTTCTTATAATCATTTTTATCTTATGGAAAAAAAAA-TTATCTCTTTCTATAACTCTTCTAGTCAATGTTCTGCATTGT s panTro4.chr21 3703787 550 + 32799110 AAGGGTTCATATCAGAATCTTTGAGAAATCATAATATTTGGGGTATTTTGAAAAGTTTCCACTTTGAGATTCTAATATGTGCCCCTTCTCCAAGGATATACTATCCCTAGTTGAGAATTACGGGTTTGGTGAGGCTTGGTGATGCTTGGGGACTGGAAAACAGAGAAAGAAGTAGAGACTGATATAGCAACTTGTATACTAGATTTAATTACAAAATCATAGCACACAACAAAAACTTGTATACAACAAAGTCATCTATAAAAATCCCTTAAACTTCTGTGAAATACAGTATAAATGGTTTCATATATGAAACTATATTCTACAACATCTGTATGTAAATGTGCTATGTATTCAAAGATAAAGATCATCTATTCCCTTAGACAGTTTATATTCATAAATTATAGCACAAGATTTGACAACTTGAAAAGCTTTAGCAAATGTATGAAAATATCAACTTACTAGGTATTTCTATTTCTTATAATCATTTTTATCTTATGGCAAAAAAAATTTATCTCTTTCTATAACTCTTCTAGTCAATGTTCTGAATTGT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16965865 548 + 48394510 AAGGGTTCATATCAGAATCTTTGAGAAATCATAATATTTGGGGTATTTTGAAAAGTTTCCACTTTGAGATTCTAATACGTGCCCCTTCTCCAAGGATATACTATCCCTAGTTGAGAATTACAGGTTTGGTGAGGCTTGGTGATGCTTGGAGACTGGAAAACAGAGAAAGAAGTAGAGACTGATATAGCAACTTGTATACTAGATTTAATTACAAAATCATAGCACACAAC-AAAACTTGTATACAACAAAGTTATCTATAAAAATCCCTTAAACTTCTGTGAAATACAGTATAAATGGTTTCATATATAAAACTATATTCTATAACATCTGTACGTAAATGTGCTGTATATTCAAAGATAAAGATCATCTATTTCCTTGGACAGTTTATATTCATAAATTATAGCACATGCTTTGACAACTTGAAAAGCTTTAGCAAATGTATGAAAATATCAACTTACTAGATATTTCTATTTCTTATAATCATTTTTATCTTATGGCAAAAAAAT-TTATCTCTTTCTATAACTCTTCTAGTCAATGTTCTGAATTGT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4463649 549 + 32716333 AAGAGTTCATATCAGAATCTTTGAGAAAACATAATATTTGGGGTATTTTGAAAAGTTTTGACTTTGAGATTCTAATATGTGCCCCTTCTCCAAGGATATACTATCCCTAGTTGAGAATTACAGGTTTGGTGAGGCTCGTTGATGCTTGGGGACTGGAAAACAGAGAAAGAAGTAGAGACTGATACAGCAACTTGCATACTAGATTTAATTACAAAGTCATAGCACACAACAAAAACTTGTATACAACAAAGTCATCTATAAAAATCCCTTAAACTTCTGTGAAATACAGTATAAATGGTTTCACATATAAAACTATATTCTATAACATCTGTACATAAATGTGCTATGTATTCAAAGATAAAGATCATCTATTTCCTTCGACAGTTTATATTCATAAATTATAGCACATGCTTTGACAACTTGAAAGGCTTTAGCAAATGTATGAAAATATCAACTTACTAGGTATTTCTATTTCTTATAATCATTTTTATCTTATGGCAAAAAAAT-TTGTCTCTTTCTATAACTCTTCTAGTCAATGTTCTGAATTGT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168579486 545 - 198365852 AAGGGTTCATATCAGAATCTTTGAGAGATGATAATATTGGGGGTATTTTGAAAAGTTTCCACCTTGAGATTCTAATATGTGCCCCTTCTCCAAGGATATACTATCCCTAGGTGAGAATTACAGGTTTGGTGAGGCTTGGTGACGCTTGGGGACTGGAAAATAGAGAAAGAAGTAGAGACTGTTATAGCAACTTGCATACTAGATTTAATTACAAAGTCGTAGCACACAACAAAAACTTGTACATGACAAAGACTTCTATGAAAATCCCTTAAACTTCTGTGAAATACAGTATAAGT-GTTTCATATCTAAAACTATATTCTATAACATCTGTAAGTAAATGTGCTGTGTATTCAAAGACAAAAATCATCTATTTCCTTAGACAGTTTGTATTCATAAATTATAGCACATGCTTTGACAACTTGAAAAGCTTTAGCAAATGCATGAAAATATCAACTTACTAGGTATTTCTATTTCTTATAATCATTTTTATCTTATGG--AAAAAAT-TTCTCTCTTTCTATCACTCTTCTC-TCAATGTTCTGAATTGT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162243382 546 - 192294377 AAGGGTTCATATCAGAATCTTTGAGAGATGATAATATTGGGGGTATTTTGAAAAGTTTCCACCTTGAGATTCTAATATGTGCCCCTTCTCCAAGGATATACTATCCCTAGGTGAGAATTACAGGTTTGGTGAGGCTTGGTGACGCTTGGGGACTGGAAAATAGAGAAAGAAGTAGAGACTGTTATAGCAACTTGCATACTAGATTTAATTACAAAGTCGTAGCACACAACAAAAACTTGTACATGACAAAGTCTTCTATGAAAATCCCTTAAACTTCTGTGAAATACAGTATAAGT-GTTTCATATCTAAAACTATATTCTATAACATCTGTAAGTAAATGTGCTATGTATTCAAAGACAAAAATCATCTATTTCCTTAGACAGTTTGTATTCATAAATTATAGCACATGCTTTGACAACTTGAAAAGCTTTAGCAAATGCATGAAAATATCAACTTACTAGGTATTTCTAATTCTTATAATCATTTTTATCTTATGG--AAAAAAT-TTCTCTCTTTCTATCACTCTTCTAGTCAATGTTCTGAATTGT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150934570 546 - 180432695 AAGGGTTCATATCAGAATCTTTGAGAAATGATAATATTGGGGGTATTTTGAAAAGTTTCCACCTTGAGATTCTAATATGTGCCCCTTCTCCAAGGATATACTATCCCTAGGTGAGAATTACAGCTTTGGTGAGGCTTGGTGACGCTTGGGGActggaaaatagagaaagaagtaGAGACTGTTATAGCAACTTGCATACTAGATTTAATTACAAAGTCGTAGCACacaacaaaaacttgtacatgacaAAGTCTTCTATGAAAATCCCTTAAACTTCTGTGAAATACAGTATAAGT-GTTTCATATCTAAAACTATATTCTATAACATCTGTAAGTAAATGTGCTGTGtattcaaagacaaaaatcatctATTTCCTTAGACAGTTTATATTCATAAATTACAGCACATGCTTTGACAACTTGAAAAGCTTTAGCAAATGCATGAAAATATCAACTTACTaggtatttctatttcttataatcatttttatcttatgg--aaaaaat-ttctctctttctatcaCTCTTCTAGTCAATGTTCTGAATTGT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15028602 546 - 90373283 AAGGGTTCATATCAGAATCTTTGAGAAATGATAATATTGGGGGTATTTTGAAAAGTTTCCACCTTGAGATTCTAATATGTGCCCCTTCTCCAAGGATATACTATCCCTAGGTGAGAATTACAGGTTTGGTGAGGCTTGGTGACGCTTGGGGACTGCAAAATAGAGAAAGAAGTAGAGACTGTTATAGCAACTTGCATACTAGATTTAATTACAAAGTCGTAGCACACAACAAAAACTTGTACATGACAAAGTCTTCTATGAAAATCCCTTAAACTTCTGTGAAATACAGTATAAAT-GTTTCATATCTAAAACTATATTCTATAACATCTGTAAGTAAATGTGCTGTGTATTCAAAGACAAAAATCACCTATTTCCTTAGACAGTTTATATTCATAAATTATAGCACATGCTTTGACAACTTGAAAAGCTTTAGCAAATGCATGAAAATATCAACTTACTAGGTATTTCTATTTCTTATAATCATTTTTATCTTATGG--AAAAAAT-TTATCTCTTTCTATCACTCTTCTAGTCAATGTTCTGAATTGT i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I e mm10.chr16 78130292 762 + 98207768 I a score=900108.000000 s hg38.chr21_KI270874v1_alt 90714 348 + 166743 TCTCAGTGCAATATTTACTCCTGAACTGCTTTTATAAAGCCAGTATTATCTACCTGTCTAGCTGTGTAAACACTACAGTTCTCCTCTTTGCCAAAGATCTAAAAAAAGAAAATCCTTAATATAGTTCACAATTGTCTTTCGGCATGCATACTGTTTCAGGCTTAAGTATATCCACAGCCTGAACACTTTTGCCCCACCTTTTAAATTATTCTTCTCATTGGCAAGTAGATGTAGTCGAATGTGTATAAGTTATATGCCTATCTGATGCTATTCCACTGTGATTACAAGATAAATTAATGGTGCCTACAACAAAGGCACGTAGAATATGCTTAGA--TGCACAGAGGACAA s panTro4.chr21 3704337 348 + 32799110 TCTCAGTGCAATATTTACTCCTGAACTGCTTTTATAAAGCCAGTATTATCTACCTGTCTAGCTGTGTAAACACTACAGTTCTCCTCTTTGCCAAAGATCTAAAAAAAGAAAATCCTTAATATAGTTCACAATTGTCTTTAGGCATGCATACTGTTTCGGGCTTAAGTATATCCACAGCCTGAACACTTttgccccaccttttaaattattcttctcattggcaagtagatgtagttgaatgtgtataagttaaatgcctatctgatgctattccactgTGATTACAAGATAAATTAATGGTGCCTACAACAAAGGCACGTAGAATATGCTTAGA--TGCACAGAGGACAA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16966413 348 + 48394510 TCTCAGTACAATATTTACTCCTGAACTGCTTTTATAAAGCCAGTATTATCTACCTGTCTAGCTGTGTAAACACTACAGTTCTCCTCTTTGCCAAAGATCTAAAAAAAGAAAATCTTCAATATAGTTCACAATTGTCTTTAGGCATGCATACTGTTTCAGGCTTAAGTATATCCACAGCCTGAACACTTTTGCCCCACCTTTTAAATTATTCTTCTCACTGGCAAGTAGATGTTGTTGAATGTCTATAAGTTAAATGCCTATCTGATGCTATTCCACTGTGATTACAAGATAAATTAATGTTGCCTACAACAAAGGCACGTAGAATATGCTTAGA--TGCACAGAGGACAA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4464198 348 + 32716333 TCTCAGTACAATATTTACTCCTGAACTGCTTTTATAAAGCCAGTATTATCTACCTGTCTAGCTGTGTAAACACTACAGTTCTCCTCTTTGCCAAAGGTCTAAAAAAAGAAAATCCTCAATATAGTTCACAATTGTTTTTCAGCATGCATACTGTTTCGGGCTTAAGTATATCCACAGCCTGAACACTTTTGCCCCACCTTTTAAATTATTCTTCTCATTGGCAAGTAGAtgtagttgaatgtgtataagttaaatgcctatctgatgctattccactgTGATTACAAGATAAATTAATAGTGCCTACAACAAAGGCACGTAGAATATGCTTAGA--TGCACAGAGGACAA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168580031 345 - 198365852 TCTCAGTACTATATTTACCCCAGAAGTGCTTTTAGAAAACCAGCATTATCCACCTGTCTAGCTGTGTAAACACTACAGTT---CTCTTTGCCAAAGATTTAAAAAAAGAAAATCCTCAATACAGTTCACAATTGTCTTTAGGCATGCATACTGTTTCAGGCTTAAGTATATACATAGCCTAAACACTTttgccccaccttttaaattattcttctcgttggcaagtagatgtagttgaatgtgtataagttaaatacctatctgatgctattccactgTGATTACAAGATAAATTAATGGTGCCTACAACAAAGGCCTGTAGAATGTGCTTAGA--TACACAGAGGACAA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162243928 345 - 192294377 TCTCAGTACTATATTTACCCCAGAAGTGCTTTTAGAAAACCAGCATTATCCACCTGTCTAGCTGTGTAAACACTACAGTT---CTCTTTGCCAAAGATTTAAAAAAAGAAAATCCTCAATACAGTTCACAATTGTCTTTAGGCATGCATACTGTTTCAGGCTTAAGTATATACATAGCCTAAACACTTTTGCCCCACCTTTTAAATTATTCTTCTCGTTGGCAAGTAGATGTAGTTGAATGTGTATAAGTTAAATACCTATCTGATGCTATTCCACTGTGATTACAAGATAAATTAATGGTGCCTACAACAAAGGCCTGTAGAATGTGCTTAGA--TACACAGAGGACAA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150935116 345 - 180432695 TCTCAGTACAATATTTACCCCAGAACTGCTTTTAGAAAACCAGCATTATCCACCTGTCTAGCTGTGTAAACACTACAGTT---CTCTTtgccaaagatttaaaaaaagaaaatcctcaataCAGTTCACAATTGTCCTTAGGCATGCATACTGTTTCAGGCTTAAGTATATCCACAGCCTAAACACTTTTGCCCCACCTTTTAAATTATTCTTCTCATTGGCAAGTAGATGTAGTTGAATGTGTATAAGTTAAATACCTATCTGATGCTATTCCACTGTGATTACAAGATAAATTAATGGTGCCTACAACAAAGGCCTGTAGAATGTGCTTAGA--TACACAGAGGACAA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15029148 345 - 90373283 TCTCAGTACAATATTTACCCCAGAACTGCTTTTAGAAAGCCAGCATTATCCACCTGTCTAGCTGTGTAAACACTACAGTT---CTCTTTGCCAAATATTTAAAAAAAGAAAATCCTCAATACAGTTCACAATTGTCTTTAGGCATGCATACTGTTTCAGGCTTAAGTATATCCACAGCCTAAACACTTTTGCCCCACCTTTTAAATTATTCTTCTTGTTGGCAAGTAGATGTAGTTGAATGTGTATAAGTTAAATACCTATCTGATGCTATTCCACTGTGATTACAAGATAAATTAATGGTGCCTACAACAAAGGCCTGTAGAATGTGCTTAGA--TACACAGAGGACAA i chlSab2.chr2 C 0 C 0 s mm10.chr16 78131054 288 + 98207768 TTTCAGTAGAACATTTATGCCTAGACCACTTTCAAAAGGCCATTATCAGCCACCTGCCTCAATGCTCAAACACTG--------CCCTTGACC---------------------------------TTAGAACTGCCCTTGA--------ACTGTTTCAAGCCTAAGTGTATCCACAG-TTAAACACTTTTACCCCACCACTTAAATTATTCTTAATAATAGC----AGGTTTAGTTTAATTTG--TGAGTTTAAGACTTAGTATGAGTTGTTCTTCTGTAATGAC-AGATAAACTTATAAGATCTACAACAAAAA-----AGAATAATTTTACAACTACACAAAGAATAA i mm10.chr16 I 762 I 288 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I a score=182419.000000 s hg38.chr21_KI270874v1_alt 91062 81 + 166743 AGCCACTAGATCTTTGAAGAAGAAATTGAAAAAAGCATCACCATGGAGATAATATTTGGAACAGTGAAGAAACTAACAGTT s panTro4.chr21 3704685 81 + 32799110 AGCCACTAGATCTTTAAAGAAGAAATTGAAAAAAGCATCACCAAGGAGATAATACTTGGAACAGTGAAGAAACTAACAGTT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16966761 81 + 48394510 AGCTACTAGACCTCTAAAGAAGAAATTGAAAAAAGCATCACCAAGGAGATAATGTTTAGAATAGTGAAGAAACTAACAGTT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4464546 81 + 32716333 AGCCGCCAGATCTTTAAAGAAGAAATTGAAAAAAGCATCACCAAGGAGATAATATTTGGAATAGTGAAGAAACTAACAGTT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168580376 81 - 198365852 AGTGACTAGCTCCTTAAAGAAGAGATTGAAAAAAGCATCACCAAGGAGGTAACATTTGGAATAGTGAAGAAACTGACAGTT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162244273 81 - 192294377 AGTGACTAGCTCCTTAAAGAAGAGATTGAAAAAAGCATCACCAAGGAGGTAACATTTGGAATAGTGAAGAAACTGACAGTT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150935461 81 - 180432695 ACTGACTAGCTCTTTAAAGAAGAGATTGAAAAAAGCATCACCAAGGAGGTAATATTTGGAATAGTGAAGAAACTGACAGTT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15029493 81 - 90373283 AGTGACTAGCTCTTTAAAGAAGAGATTGAAAAAAGTATCACCAAGGAGGTAATATTTGGAATAGTGAAGAAACTGACAGTT i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I e mm10.chr16 78131342 288 + 98207768 I a score=160983.000000 s hg38.chr21_KI270874v1_alt 91143 323 + 166743 AAAGATGTC-AATGGAAggccgggtgcagtggttcacacctgtaatcccagcactttgggaggctgaggcaggtggatcacctgaggtcaggagttcgagaccagcctgaccaacatggtgaaaccccatctctactaaaaaattacaaaaattatctgggtatggtgg--tatgcacctataatccgagctacttgggatgctgaggcaggaggatggcttgagccctggaggcagagattgcagtgagccgagatcacaccattgcactccagcctgtgcaactagagcaaaactcttctcaaaaaaaaaaaaaaaaaaaaaaa s panTro4.chr21 3704766 316 + 32799110 AAAGATGTC-AATGGAAggccgggtgcagcggctcacacctgtaatcccagcactttgggaggctgaggcaggtggatcacctgaggtcaggagttcgagaccagcctgaccaacatggtgaaaccccatctctactaaaaaattacaaaaattatctgagtatggtggtatatgcacctataatccgagctacttgggatgctgaggcaggagaatggcttgagccctggaggcagagattgcagtgagccgagatcacaccattgcactccagcctgtgcaactagagcaaaactcctctc---------aaaaaaaaaaaaaa i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16966842 316 + 48394510 AAAGATGTCAAATGGAAggccgggtgcagtggctcacacctgtaatcccagcactttgggaggctgaggcaggtggatcacctgaggtcaggagttcgagaccagcctgaccaacatgatgaaaccccatctctactaaaaaattacaaaaattatctgggtatggtgg--tatgcacctataatccaagctacttgggaggttgaggcaggagaatggcttgagccctggaggcagagattgcagtgagccgagatcacaccattgaactccagcctgtgcaactacagaaaaactcctctc--------aaaaaaaaaaaaaaa i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4464627 322 + 32716333 AAAGATGCC-AATGGAAggtcaggcacggtggctcacgcctgtaatcccagcactttgggaggctgaggcaggcggatcacctgaggtcaggagttcgagaccaacctgaacaacatggtgaaaccccatctctactaaaaaattacaaaaactatctgggtatggtgg--tatgtgcctataatccgagctacttgggaggctgaggcaggagaattgcttgagccctggaggcagagattgcagtgagccgagatcacaccattgcactccagcctgtgcaactagagcaatactcctcta-aaaaaaaaaaaaaaaaataaaa i nomLeu3.chr25 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I e mm10.chr16 78131342 288 + 98207768 I e rheMac3.chr3 168580457 0 - 198365852 C e chlSab2.chr2 15029574 0 - 90373283 C e macFas5.chr3 162244354 0 - 192294377 C e papAnu2.chr3 150935542 0 - 180432695 C a score=456941.000000 s hg38.chr21_KI270874v1_alt 91466 193 + 166743 aaaGATGTCAATGGAGGTAGGTCAGATACTCTAGCAAAAACATAAATAAATATAAGAGGCATAAAAGAATATAGTACGTTTAGGAAATGGTGATAAGTTTGAATCATTAAAG-GAAAGTATGTTGGTccaggctctgtggctcatgcctgtaatccaagcactttgggaggctaaggtgggcagatcacttgag s panTro4.chr21 3705082 193 + 32799110 aaaGATGTAAATGGAGGTAGGTCAGATACTCTAGCAAAAACATAAATAAATATAAGAGGCATAAAAGAATATAGTATGTTTAGGAAATGGTGATAAGTTTGAATCATTAAAG-GAAAGTATGTTGGTccaggctctgtggctcatgcctgtaatccaagcactttgggaggctaaggtgggcagatcacttgag i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16967158 193 + 48394510 aaaGATGTCAATGGAAGTAGGTCAGATACTCTAGCAAAAACATAAATAAATATAAGAGGCATAAAATAATATAGTATGTTTAGGAAATGGTGATAAGTTTGAATCATTAAAG-GAAAGTATGTTGGTccaggctctgtggctcatgcctgtaatccaagcactttgggaggctgaggtgggcggatcacttgag i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4464949 189 + 32716333 aaaGATGTCAATGGAGGTAGATCAGATACTCTAGCAAAAAC--AAATAAATATAAGAGGCATAAAAG-ATATAGTATGTTTAGGAAATGATGATAAGTTTGAATCATTAAAG-GAAAGTATGTTAGTccaggctctgtggctcatgcctgt-atccaagcactttgggacgctgaggtgggcggatcacttgag i nomLeu3.chr25 C 0 I 126 s rheMac3.chr3 168580457 192 - 198365852 AAAGATGTCAATGGAGACAGGTCAGATACTCTAGCAAAAACATAAATAAATATAAAAGGCATAAAAGAATATCGTATGTTTAGG-AATGATGATAAGTTTGAATCATTAAAG-AAAAGTATGTTGGTccaggctctgtggctcatgcctgtaatcccagcactttgggaggctgaggtgggcagatcacttgag i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162244354 192 - 192294377 AAAGATGTCAATGGAGACAGGTCAGATACTCTAGCAAAAACATAAATAAATATAAAAGGCATAAAAGAATATCGTATGTTTAGG-AATGATGATAAGTTTGAATCATTAAAG-AAAAGTATGTTGGTccaggctctgtggctcatgcctgtaatcccagcactttgggaggctgaggtgggcagatcacttgag i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150935542 193 - 180432695 AAAGATGTCAATGGAGACAGGTCAGATACTCtagcaaaaacataaataaatataaaaggcatAAAAGAATATAGTATGTTTAGG-AATGATGATAAGTTTGaatcattaaagaaaaagtatGTTGGTCCAGGCtctgtagctcatgcctgtaatcccagcactttgggagactgagatgggcagatcacttgag i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15029574 192 - 90373283 AAAGATGTCAATGGAGACAGGTCAGATACTCTAGCAAAAACATAAATAAATATAAAAGGCATAAAAGAATATAGTATGTTTAGG-AATGATGATAAGTTTGAATCATTAAAG-AAAAGTATGTTGGTccaggctctgtggctcatgcctgtaatcccagcactttgggaggctgaggtgggcagatcacttgag i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I e mm10.chr16 78131342 288 + 98207768 I a score=138790.000000 s hg38.chr21_KI270874v1_alt 91659 89 + 166743 gtcaggagttcaagatcagcctggcaaacacgatgaaaccctgtctctact----------aaaaaaaaataaaattagccaagcatgctggcggtcac s panTro4.chr21 3705275 90 + 32799110 gtcaggagttcaagatcagcctggcaaacatggtgaaaccctgtctctact---------aaaaaaaaaataaaattagccaggcatgctggcggtcac i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16967351 94 + 48394510 gtcaggagttcaagatcagcctggccaacatggtgaaaccctgtctctacta-----aaaaaaaaaaaaaaaaaattagccaggcatggtggcagtcac i ponAbe2.chr21 C 0 C 0 s rheMac3.chr3 168580649 99 - 198365852 gtcaggagttcaagaccagcctggtcaatatggtgaaaccctgtctctactttaaaaaaaaaaaaaaaaaaaaaaatagccgggcatggtggtgggcac i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162244546 93 - 192294377 gtcaggagttccagacgagcccggtcaatatggtgaaaccctgtctctactt------aaaaaaaaaaaaaaaaaatagccgggcatggtggtgggcac i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150935735 92 - 180432695 gtcaggagttcaagaccagtctggtcaatatggtgaaaccctgtctctact-------aaaaaaaaaaaaaaaaatttgccgggcatggtggtgggcac i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15029766 90 - 90373283 gtcaggagttcaagaccagcctggtcaatatggtgaaaccctgtctctactt---------aaaaaaaaaaaaaattagccgggcatggtggtgggcac i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I e mm10.chr16 78131342 288 + 98207768 I e nomLeu3.chr25 4465138 126 + 32716333 I a score=265894.000000 s hg38.chr21_KI270874v1_alt 91748 107 + 166743 ctgtaatcccagctactcaggagtctgaggcagggaaagttgcttgaacatgggaggcagatgttgcaatgagccaagaccaggccactgtactccagcctgggcca s panTro4.chr21 3705365 107 + 32799110 ctgtaatcccagctactcaggaggctgaggcagggaaagttgcttgaacatgggaggcagatgttgcaatgagccaagaccaggccactgtactccagcctgggcca i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16967445 104 + 48394510 ctgtaat-ccagctactcagcag-ctgaggcagagaaagttgcttgaacatgggaggcagatgttgcaatgagccaagatcagg-cactgtactccagcctgggcca i ponAbe2.chr21 C 0 I 108 s nomLeu3.chr25 4465264 107 + 32716333 ctgtaatcccagctattcaggaggctgaggcagggaaagttgcttgaacatgggaggcagatgttgcaatgagccaagaccagaccactgtactccagcctgggcca i nomLeu3.chr25 I 126 C 0 s rheMac3.chr3 168580748 107 - 198365852 ctgtaatcccagctactcaggaaactgaggcagggaaagttgcttgaacatgggaggcagatgttgcaatgagccaagaccaggccactgtactccagcctgggcca i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162244639 107 - 192294377 ctgtaatcccagctactcaggaaactgaggcagggaaagttgcttgaacatgggaggcagatgttgcaatgagccaagaccaggccactgtactccagcctgggcca i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150935827 107 - 180432695 ctgtaatcccagctactcaggaaactgaggcagggaaagttgcttgaacatgggaggcagatgttgcaatgagccaagaccaggccactgtactccagcctgggcca i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15029856 107 - 90373283 ctgtaatcccagctactcaggaaactgaggcagggaaagttgcttgaacatgggaggcagatgttgcaatgagccaagaccaggccactgtactccagcctaggcca i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I e mm10.chr16 78131342 288 + 98207768 I a score=23497.000000 s hg38.chr21_KI270874v1_alt 91855 13 + 166743 cagagcaagattg s panTro4.chr21 3705472 13 + 32799110 cagagcaagattc i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4465371 13 + 32716333 cagagcaagactc i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168580855 13 - 198365852 cagagcaagactc i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162244746 13 - 192294377 cagagcaagactc i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150935934 13 - 180432695 cagagcaagactc i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15029963 13 - 90373283 cagagcaagactc i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I e mm10.chr16 78131342 288 + 98207768 I e ponAbe2.chr21 16967549 108 + 48394510 I a score=18592.000000 s hg38.chr21_KI270874v1_alt 91868 7 + 166743 tgtctca s panTro4.chr21 3705485 7 + 32799110 tgtctca i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16967657 7 + 48394510 TGTCTCa i ponAbe2.chr21 I 108 C 0 s nomLeu3.chr25 4465384 7 + 32716333 tgtctca i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168580868 7 - 198365852 tgtctca i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162244759 7 - 192294377 tgtctca i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150935947 7 - 180432695 tgtctca i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15029976 7 - 90373283 tgtctca i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I e mm10.chr16 78131342 288 + 98207768 I a score=559896.000000 s hg38.chr21_KI270874v1_alt 91875 244 + 166743 aaaaata-aaaaaaaaaaaaaagaaagaaaAGAAAAGTATGTTGGTGAGTATATCTGGAG---AGATTTGTC-AAAAACAATGGAACTAATAAAGTACAAATGGAACCAATAAAATAAACTATTCCTAGACTGTGGTAAGTTTCACATGCTCTGAGAAGGCATATAGATATAGACTTTATATTATCATCAAAAGGTAACTAACATGAGGAGTTAATCAAAGAGTAATATGGTTA--TGTTTTGCTTTTTTT s panTro4.chr21 3705492 245 + 32799110 aaaaat---aaaaaaaaagaaagaaagaaaaGAAAAGTATGTTGGTGAGTATATCTGGAGAGAAGATTTGTC-AAAAAAAATGGAACTAATAAAGTACAAATGGAACCAATAAAATAAACTATTCCTAGACTGTGGTAAGTTTCACATGCTCTGAGAAGGCATATAGATATAGACTTTATATTATCATCAAAAGGTAACTAACATGAGGAGTTAATCAAAGAGTAATATGGTTA--TGTTTTGCTTTTTTT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16967664 247 + 48394510 aaaaat--aaaataaaaaaaaagaaagaaaagaaaaGTATCTTGGTGAGTATATCTGGAGAGAAGATTTGTCAAAAAAAAATGGAACTAATAAAGTACAAATGGAAACAATAAAATAAACTATTCCTAGACTGTGGTAAGTTTCACATGCTCTGAGAAGACATATAGATATAGACTTTATATTATCATCAAAAGGTAACTAACATGAGGAGTTAATCAAAGAGTAATATGGTTA--TGTTTTGCTTTTTTT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4465391 240 + 32716333 aaaaat-------aaaaaaaaagaaGGAAAAGAAAAGTATGTTGATGAGTATATCTGGAGAGAAGATTTGTC--AAAAAAATGGAATTAATAGAGTACAAATGGAACAAATAAAATAAACTATTCCTAGACTGTGGTAAGTTTCACATGCTCTGAGAAGGCATATAGATATAGACTTTGTATTATCATCAAAAGGTAACTAACATGAGGAGTTAATCAAAGAGTAATATGGTTA--TGTTTTGCTTTTTTT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168580875 235 - 198365852 aaaaat------------aaaaaaaaagaaagaaaaGTATGTTGATGAGTATATCTGGAGAGAAGATTTGTC-CAAAAAA-TGGAACTAATAAAGTACAAATGGAACCAATAAAATAAACTGTTCCTAGACTATGGTAAGTTTCACATGCTCTGAGAAGACATATAGATATGGACTTTATATTATCATCAAAAGGTAACTAACATGAGGAGTTAATCAATGAGCAACAAGGTAA--TGTTTTGCTTTTTTT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162244766 236 - 192294377 aaaaat-----------aaaaaaaaaagaaagaaaaGTATGTTGATGAGTATATCTGGAGAGAAGATTTGTC-CAAAAAA-TGGAACTAATAAAGTACAAATGGAACCAATAAAATAAACTGTTCCTAGACTATGGTAAGTTTCACATGCTCTGAGAAGACATATAGATATGGACTTTATATTATCATCAAAAGGTAACTAACATGAGGAGTTAATCAATGAGCAACAAGGTAA--TGTTTTGCTTTTTTT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150935954 235 - 180432695 aaaaat-------------aaaaaaaagaaagaaaagtatgttGATGAGTAtatctggagagaagatttgtC-aaaaaaaGTGGAACTAATGAAGTACAAATGGAACCAATAAAATAAACTGTTCCTAGACTATGGTAAGTTTCACATGCTCTGAGAAGACATATAGATATAGACTTTATATTATCATCAAAAGGTAACCAACATGAGGAGTTAATCAATGAGCAACAAggtta--tgttttgcttttttt i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15029983 235 - 90373283 aaaaat-------------aaaaaaaagaaagaaaaGTATGTTGATGACTATATCTGGAGAGAAGATTTGTC-AAAAAAAGTGGAACTAATAAAGTACAAATGGAACCAATAAAATAAACTGTTCCTAGACTATGGTAAGTTTCACATGCTCTGAGAAGACATATAGATATGGACTTTATATTATCATCAAAAGGTAACTAACATGAGGAGTTAATCAATGAGCAACAAGGTTA--TGTTTTGCTTTTTTT i chlSab2.chr2 C 0 C 0 s mm10.chr16 78131630 218 + 98207768 ------agagagagagagagagagagagacagagagacagagagacagagagacagagagagaga--------gagagaTTTGGGATGAAT-AATTACA-----AACCAGTAAAACAG--TGATCTCACAGCATAGCAAGTCTCATATGCTTTGAGAAGACTTGTACAT------TTCATCTTACTATAAA-----AATTAACAGTGGGAATTAAGCAAAGAACATTAGGCTTAACTATTTTGCTTATTTG i mm10.chr16 I 288 C 0 e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I a score=1881755.000000 s hg38.chr21_KI270874v1_alt 92119 629 + 166743 CTTTCAGTAACATAACTTTAATAGCAGTAAGGAGTTATGGATTAGAGACAGAAAAAGAGTAGATATGTGTATATCCATTAGGAAAACTTTGCTTAAGCCGAGAAGGGAATGAAGAGATGATAATAAAGTCAACATTTGAACTTAGCAATTGGTTCT-TTGcaatacactgtggagattaacaattcaggctttaaactagacttctagggtctacagctacttctgctattataaaaccacgaagaaactaactcctctaaacttcagttatgtgtcagttaaatagtacttcctggataagattatgcttgacataatgcatgtaaaagtactcagcgccatttgtggtacacagtaagaattcactgttaagtatcattACTAGCTATGGTGAGGAGATAAAAGTAGAGAAAGAGAAATCCAGAATGATTCTCCGATTTCCTGCTTGAATAATGAAGTAC-TAGGTAATGTTGGAAGAAAAATAGGTTTTGCAAAAAGGTAGGtc-------------tctctctctctctttctct----------------------TTTAGAATTATTATCTGCCTCTTTTTTCAATCCTAGTAT-TCTCCTTAAC-CTAGACCAGGAAGCTGAACCTGCTGGATATCTTCCA-TTTTCCCTTCAGATCAATTT s panTro4.chr21 3705737 630 + 32799110 CTTTCAGTAACATAACTTTAATAGCAGTAAGGAGTTATGGATTAGAGACAGAAAAAGAGTAGATATGTGTATATCCATTAGGAAAACTTTGCTTAAGCCGAGAAGGGAATGAAGAGATGATAATAAAGTCAATATTTGAACTTAGCAATTGGTTCT-TTGcaatacactgtggagattaataattcaggctttgaactagacttctagtgtctacagctacttctgccattataaaaccatgaagaaactaactcctctaaacttcagttatgtgtcagttaaatagtacttcctggataagattatgcttgacataatgcatgtaaaagtactcagtgccatttctggtacacagtaagaattcactgttaagtatcattACTAGCTATGGTGAGGAGATAAAAGTagggaaagagaaatcaagaatgattctcagatttcctgcttgaataatgaagTAC-TAGATAATGTTGGAAGAAAAATAGGTTTTGCAAAAAGGTAGGTC-------------TCTCTCTCTCTCTTTCTCT----------------------TTTAGAATTATTATCTGCCTCTTTTTTCAATCCTAGTAT-TCTCCTTAACACTAGACCAGGAAGCTGAACCTGCTGGATATCTTCCA-TTTTCCCTTCAGATCAATTT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16967911 628 + 48394510 CTTTTAGTAACATAACTTTAATAGCAGTAAGGAGTTATGAATTAGAGACAGAAAAAGAGTAGATATGTGTATATCCATTAGGAAAACTTTGCTTAAGCCGAGAAGGGAATGAAGAGATGATAATAAAGTCAACATTTGAACTTAGCAATTGGTTCT-TTGcaatacactgtggagattaataattcaggctttaaactagacttctagggtctacagctacttctaccattataaaaccatgaagaaactaactcctctaaacttcagttatgtgtcagttaaatagtacttcctggataagattatgcttgacataatgcatgtaaaagtactcagtgccatttctggtacacagtaagaattcaCTGTTAAGTATGATTACTAGCTATGGCGAGGAGATAAAAGTAGGGAAAGAGAAATCAAGAATGATTTTCAGATTTCCTGCTTGAATAATGAAGTAC-TAGATAATGTCGGAAGAAAAATAGGTTTTGCAAAAATGTAGGtc-------------tctctctctctctctctct----------------------TTTAGAATTATTTTCTGCCTC--TTTTCAATCCTAGTAT-TCTCCTTAACCCTAGACCAGGAAGCTGAACCTGCTGGATATCTTCCA-TTTTCCCTTCAGATCAATTT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4465631 622 + 32716333 CTTTTAGTTACATAACTTTAATAGTAGTAAGGAGTTATGGGTTAGAGACAGAAAAAGAGTAGACATGTGTATATCCATTAGGAAAACTTTGCTTAAGCCGAGAAGGGAATGAAGAGACGATAATAAAGTCAACATTTGAACTTAGCAATTGGTTCT-TTGcaatacactgtggagattaataattcaggctttaaactagacttctagggtctacagctacttctaccattataaaaccacgaagaaactaactcctctaaacttcggttatgtgtcagttaaatagtacttcctggataagattatacttgacacaatgcatgtaaaagtactcagcgccatttctggtacacagtaagaattcactgttaagtatcattACTAGCTATGGTGAGGAGATAAAAGTAGGGAAAGAGAAATCAAGAATGATTCTCAGATTTCCTGCTCGAATAATGAAGTAC-TAGATAATGTTGGAAGAAAAATAGGTTTTGCAAAAAGGTAGGTC-------------TCTCTC--------TCTCT----------------------TTTAGAATTATTATCTGCCTCTTTTTTCAATCCTAGTAT-TCTCCTTAACACTAGACCAGGAAGCTGAATCTGCTGGATATCTTCCA-TTTTCCCTTCAGATCAATTT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168581110 630 - 198365852 CTTTCAGTAACATAACTTTAATAGCAGTAAGGAGTTACGGATTAGAGACACAAAAAGAGTAGATATGTGTATATCCATTAGGAAAACTTTGCCTTAGCCAAGAAGGAAATGAAGAGGATATGATAAAGTCAACATTTGAACTTTGCAATTGGTTCT-TTGCAATACACTGTGGAGATTAATAATGCAGGCTTTAAACTAGACTTCTAAGGTCTATAACTACT------ATTATAAAACCACAAAGAAACGaactcctctaaacttcagttatgtgtcagttaaatagtactttctggataagattgtacttgacataatgcaagtaaaagtactcagcaccatttctgacacacagtaagaactcactgttaagtatcattACTGGCTATGGTGAGGAGATGAAAGTAGGCAAAGAGAAATCAAGAATGATTCTCAGATTTCCTGATTGAATAATGAAGTAC-TGGATAATGTTGGAAGAAAAATAGGTTTTGCAAAAAGGCAGGTCTCctctt------tctctctctctctctctct----------------------ctcAGAATTATTATCTGCCTC-TTTTTCAATCCTAGTAC-TCTCCTTAACACTAGACCAGGAAGCTGAACCTGCTGGATATCTTCAA-TTTTCCCTTCAGATCAATTT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162245002 630 - 192294377 CTTTCAGTAACATAACTTTAATAGCAGTAAGGAGTTACGGATTAGAGACACAAAAAGAGTAGATATGTGTATATCCATTAGGAAAACTTTGCCTTAGCCAAGAAGGAAATGAAGAGGATATGATAAAGTCAACATTTGAACTTTGCAATTGGTTCT-TTGCAATACACTGTGGAGATTAATAATGCAGGCTTTAAACTAGACTTCTAAGGTCTATAACTACT------ATTATAAAACCACAAAGAAACGaactcctctaaacttcagttatgtgtcagttaaatagtactttctggataagattgtacttgacataatgcaagtaaaagtactcagcaccatttctgacacacagtaagaactcactgttaagtatcattACTGGCTATGGTGAGGAGATGAAAGTAGGCAAAGAGAAATCAAGAATGATTCTCAGATTTCCTGATTGAATAATGAAGTAC-TGGATAATGTTGGAAGAAAAATAGGTTTTGCAAAAAGGCAGGtctcctctt------tctctctctctctctctct----------------------ctcAGAATTATTATCTGCCTC-TTTTTCAATCCTAGTAC-TCTCCTTAACACTAGACCAGGAAGCTGAACCTGCTGGATATCTTCAA-TTTTCCCTTCAGATCAATTT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150936189 621 - 180432695 cttttagtaacaTAACTTTAATAGCAGTAAGGAGTTACGGATTAGAGACACAAAAAgaatagatatgtatatatccatTAGGAAAACTTTGCCTTAGCCAAGAAGGGAATGAAGAGGATATGATAAAGTCAACATTTGAACTTTGCAATTGGTTCT-TTGCAATACACTGTGGAGATTAATAATGCAGGCTTTAAACTAGACTTCTAAGGTCTACAACTACT------attataaaaccacaaagaaacgAACTCCTCTAAACTTCAGTTATGTGTCAGTTAAATAGTTCTTTCTGGATAAGATTGTACTTGACATAATGCAAGTAAAGGTACTCAGCACCATTTCTGACACACAGTAAGAACTCACTGTTAAGTATCATTACTGGC---------------AAAGTAGGCAAAGAGAAATCAAGAATGATTCTCAGATTTCCTGATTGAATAATGAAGTAC-TGGATAATGttggaagaaaaataggttttgCAAAAAGGCAggtctcctctttctctctctctctctctctctctct----------------------ctcagaattATTATCTGCCTC-TTTTTCAATCCTAGTAC-TCTCCTTAACACTAGACCAGGAAGCTGAACCTGCTGGATATCTTCAA-TTTTCCCTTCAGATCAATTT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15030218 650 - 90373283 CTTTTAGTAACATAACTTTAATAGCAGTAAGGAGTTACGGATTAGAGACACAAAAAGAGTAGATATGTGTATATCCATTAGGAAAACTTTGCTTTAGCCGAGAAGGGAATGAAGAGGATATGATAAAGTCAACATTTGAACTTTGCAATTGGTTCT-TTGCAATACACTGTGGAGATTAATAATGCAGGCTTTAAACTAGACTTCTAAGGTCTACAAC-ACT------ATTATAAAACCACAAAGAAACGAACTCCTCTAAACTTCAGTTATGTGTCAGTTAAATAGTACTTTCTGGATAAGACTGTACTtgacataatgcaagtaaaagtactcagcaccatttctgacacacagtaagaactcactgttaagtatcattACTGGCTATGGTGAGGAGATCAAAGTAGGCAAAGAGAAATCAAGAATGATTCTCAGATTTCCTGATTGAATAATGAAGTAC-TGGATAATGTTGGAAGAAAAATAGGTTTTGCAAAAAGGCAGGTGt-ctctc------tctctctctctctctctctcacacacacacacacacacacacacaGAATTATTATCTGCCTC-TTTTTCAATCCTAGTAC-TCTCCTTAACACTAGACCAGGAAGCTGAACCTGCGGGATATCTTCAA-TTTTCCCTTCAGATCAATTT i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21931377 614 + 50472720 CTCCCAGAAACATAACTTGAATAGCATTAAGGAGTTATGGATTAGAGACAGATAAAGAGTAGATATGTGTATATCCATTAGGAAAACTTTGCTAAAACCCAAAAAAGAATGAAGAGAAGATGAGAAGGTCAACATTTGAACTCCGCAATTGGTTCT-TTGcaatacactgtggagattaataatgcgggctttaaaccaaactttcaaagtctgcatctacttctaccattataaaatcacaaagaaactaattcctctgaactgcagttatgtgacagttaagtagtacctcctggataagattacacctgatgtaatgcatgtaaaagtactcagcaccaatcctggcacacagtgagaattcaCTGTTCAATATCATAACTGGCTATGGTGAGGAGATGAAAGTAGGGAAA---AAATCAAGAATGATTCTTAGATTTTCTACTTAAATTATGAAGTAC-TAGATAATGTTGGAAGGAAAACAAGTTTTGCAAAAAG---------------------------CTCTCTCTCTCT----------------------CTCAGAATTATTATTTGTCTCTTTTTTCAATCCTAGTAT-TGTCCTTCACACTAGACCAGGAAGCAGAACCAGCTGGATATCTTCCACTTTTCCCTTCAGATCAATTT i calJac3.chr21 I 2056 C 0 s mm10.chr16 78131848 561 + 98207768 -TTCCCAGCACATCA--------------------------TTAGGGACC-----------------TGTAGATCCATTTGGATGACTTTGCTTAAGCCCATAGGGAAACAAAGGCAGAATAATTAGGTCAGAATGTGAACTTGGCAATTCTATCGATTGCAAGGTAGCACGGGTGTT-ATGTGCCAGGGTTTAAACTACACTTCCTGGATCTGTACAAAAATGAATAGTTATAAAACATTGGGATAACTAATT--TCTAAGTGTCAATTGC-TGACAGTCGAATAGCACCTCCCACAT---ATATTACCTGACAC-ATGCATGTGAACGTACCCAATACCTCTTTTGCCATACCCAAAAAATTGACTATTAAGTATTAT---TCAGTCTGGTGAAGAAATCA------GGAGGCAGGAAATAAGGAAAATTCAT---TTTCCTGTCCAAAT-ATGAAGTACACAGACAATGATAGAAGATAAAGATGATTTG-AAAAATATAGG---------------GTTATTTTTTTCCTTTTCT----------------------CACAAAATTATCATCTGCCTCTTATTCTGGTCCTAGTTTGTATCCT-----GCAAAGCAGGAAACTGAGGCTGCTAGAACTCTTCTCCTTGATCCTTCACATCCATTT i mm10.chr16 C 0 C 0 e canFam3.chr31 13830659 304 + 39895921 I a score=51632.000000 s hg38.chr21_KI270874v1_alt 92748 16 + 166743 TC-------------------TGCATCTATGAAGT s panTro4.chr21 3706367 16 + 32799110 TC-------------------TGCATCTACGAAGT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16968539 16 + 48394510 TC-------------------TGCATCTACCAAGT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4466253 16 + 32716333 TC-------------------TGCATCTACCAAGT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168581740 16 - 198365852 TC-------------------TGCATCTACCAAGT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162245632 16 - 192294377 TC-------------------TGCATCTACCAAGT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150936810 16 - 180432695 TC-------------------TGCATCTACCAAGT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15030868 16 - 90373283 TC-------------------TGCATCCACCCAGT i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21931991 16 + 50472720 TC-------------------TACATCAACCAAGT i calJac3.chr21 C 0 C 0 s mm10.chr16 78132409 35 + 98207768 TCCATCTGCTCCCTGATTATATATGTCCATGCAGT i mm10.chr16 C 0 I 150 s canFam3.chr31 13830963 16 + 39895921 tc-------------------tgcatccACCAAGC i canFam3.chr31 I 304 C 0 a score=994047.000000 s hg38.chr21_KI270874v1_alt 92764 316 + 166743 AAGAAACCCAGCTTCTGCCAAGAAATCCTGCTGCTTCTAGCCTGAGTCTTACACTG---CCTGTGGCTTCTTAGTGCCTTAAAaaacaatccctccattaaactctactgaaa--ttgtccaattggattgtgccatctctggttctgcaaa-gacccttactgatacaTGGAAACTGGCATATCCTGGAATCAAGTCTCCTGGAGGGATTGGGAGT-GAC--AAGTATATCTCAATACA----------------------------------TCAGAACTGATTATTTCCTACTCTATGGTGACCTACTCTAAGGAGATTCGAGGCAATTT---------TAAAAATCCAATAAAAGGGGGGTTAG--- s panTro4.chr21 3706383 316 + 32799110 AAGAAACCCAGCTTCTGCCAAGAAATCCTGCTGCTTCTAGCCTGAGTCTTACACTG---CCTGTGGCTTCTTAGTGccttaataaacaatccctccattaaactctactgaaa--ttgtccaattggattgtgccatctctggttctgcaaa-gacccttactgatacaTGGAAACTGGCATATCCTGGAATCAAGTCTCCTGGAGGGATTGGGAGT-GAT--AAGTATATCTCAATACA----------------------------------TCAGAACTGATTATTCCCTACTCTATGGTGACCTACTCTAAGGAGATTCGAGGCAATTT---------AAAAAATCCAATGAAAGGGGGGTTAG--- i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16968555 293 + 48394510 AAGAAACCCAGCTTCTGCCAAGAAATCCTGCTGCTTCTAGCCTGAT---------------------------ATGccttaataaacaatccctccattaaactgtactgaaa--ttgtccagctggattgtgccatctctggttctgcaaacgacccttattgatacaTGGAAACTGGCATATCCTGGAATCAAGTCTCCTGGAGGGATTGGGAGT-GAC--AAATATATCTCAATACA----------------------------------TCAGAACTGATTATTCCCTACTCTATAGCGACCTAATCTAAGGAGATTCGAGGCAATTT---------AAAAAATCCAATAAAAGAGGGGTTAG--- i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4466269 316 + 32716333 AAGAAACCCAGCTTCTGCCAAGAAATCCTGCTGCTTCTAGCCTGAGTCTTAGACTG---CCTGTGGCTTCTTAGTGTcttaataaacaatccctccgttaaactctactgaaa--ttgtccagttggattgtgccatctctggttctgcaaa-gacccttattgatacaTGGAAACTGGCATATCCTGGAATCAAGTCTCCTGGAGGGATTGGGAGT-GAC--AAGTATATCTCAATACA----------------------------------TCAGAACTGATTATTCCCTACTCTATAGTGACCTACTCTAAGGAGATTCAAGGCAATTT---------AAAAAATCCAATAAAAGGGGGGTTAG--- i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168581756 319 - 198365852 AAGAAACCCAGCTTCTGCCAAGAAATCCTGCTGCTTCTAGCCTGAGTCTTACACGG---CCTGTGACTTCTTAGcgccttaataaacattccctccatcaaactctgctgaaa--ttgtccagttggattgtaccatctctggttctgcaaa-gacccttattgatccaTGGAAACTGTCATATCCTGGAATCAAGTCTCCTGGAGGGATTGGGAGT-GAC--CAATACATCTCAATACA----------------------------------TCAGAACTGATTATTCCCTTCTCTATAGGGCTCTACTTTAAGGAGACTCAAGGCAATTT------AAAAAAAAATCCAATAAAGGGGGTGTTAG--- i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162245648 318 - 192294377 AAGAAACCCAGCTTCTGCCAAGAAATCCTGCTGCTTCTAGCCTGAGTCTTACACGG---CCTGTGACTTCTTAGCGCCTTAATAAACATTCCCTCCATCAAACTCTGCTGAAA--TTGTCCAGTTGGATTGTACCATCTCTGGTTCTGCAAA-GACCCTTATTGATCCATGGAAACTGTCATATCCTGGAATCAAGTCTCCTGGAGGGATTGGGAGT-GAC--CAATACATCTCAATACA----------------------------------TCAGAACTGATTATTCCCTTCTCTATAGGGCTCTACTTTAAGGAGACTCAAGGCAATTT-------AAAAAAAATCCAATAAAGGGGGTGTTAG--- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150936826 316 - 180432695 AAGAAACCCAGCTTCTGCCAAGAAATCCTGCTGCTTCTAGCCTGAGTCTTACACGG---CCTGTGACTTCTTAGCGCCTTAATAAACATTCCCTCCATTAAACTCTGCTGAAA--TTGTCCAGTTGGATTGTACCATCTCTGGTTCTGCAAA-GACCCTTATTGATCCATGGAAACTGTCA---CCTGGAATCAAGTCTCCTGGAGGGATTGGGAGT-GAC--CAATACATCTCAATACA----------------------------------TCAGAACTGATTATTCCCTTCTCTATAGGGCTCTACTTTAAGGAGACTcaaggcaattt------aaaaaaaaatccaataaaggGGGTGTTAG--- i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15030884 325 - 90373283 AAGAAACCCAGCTTCTGCCAAGAAATCCTGCTGCTTCTAGCCTGAGTCTTACACTG---CCTGTGACTTCTTAGcgccttaataaacactccctccattaaactctaccgaaa--ttgtccaattggattgtaccatctctggttctgcaaa-gacccttattgatccaTGGAAACTGGCATATCCTGAAATCAAGTCTCCTGGAGGGATTGGGAGT-GAC--AAACACATCTCAATACA----------------------------------TCAGAACTGATTATTCCCTGATCTATAGGGATCTACTTAAAGGAGACTCAACGCAATTAAAAAAAAAAAAAAAATCCAATAAAGGGGGCGTTAG--- i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21932007 315 + 50472720 AAGAAACCCAACTTCTGCCAAAAAGTcctgctgcttttagcctgagtcctacactg---cctgtggtttcttcacaccttagtaaacattccctttgttaaactctactgaaa--ctgttcagttgtattgtgccatctctggttctgcaaa-gccccttattgataAACGGAAACTGGCATATCCTGGAATCAAGTCTCCTGGAGGGATTGGGAGT-GGT--GAACATATCTCAATACA----------------------------------TCCGAACTGATTATTCCCTACTCCATAGGGACTTACTCTAAGGAGACTCAAGGCAATTA---------AGTAAATCCAATAAAAAGGGGG-TAG--- i calJac3.chr21 C 0 C 0 s mm10.chr16 78132594 301 + 98207768 AAGATGCTCAACTTCTGCCTAACAGCCCTACTGATTCTAGCTTAAGTCTTAAATTA---AATTTTATTT-----TGCCCACCTTAAAATTTTCTCTAGTCAACTCTCTTGAAAAGTTTTCCAAATGGAGTATATCTTTTATGGTTCTGCTAA-TATCCTTACTGACCCACAAAGGATAAAATAATCTAGATTTGAACATTCCAAAGGATTCAGAATTAGAG--AAACATACCTTGATAAA----------------------------------CTAAACAGAATTCTTTCCT--------GGGCCCCAT----GGGAAACTTTCAACCAGTT----------AAAAATACTGGAGAGAGATAGTTAG--- i mm10.chr16 I 150 C 0 s canFam3.chr31 13830979 327 + 39895921 --------------ATCCCTAACCATcctgcagtttctagcctgagtcctgcattgtcccctgtggtatcctcacaccttagtaaaaagtccctctaccaaactcttctgaaa--ttgtccgatttccgtatgccatctctggatcttccaa-gaccc----taacACACTGAGACTGAAGTGTCCCGGATCCAAGACCTTTAGGGAGAGCAGGCGT-GATGGAAACATACTTGGATACACTGCAGGGGCAATGAAAGGATAGATTTAAAAATCTTGAATCTGATTCTTTCCT---------GGGCCTGGTCTGGGGAATCATCAGCCA-------------AAGAAACTCAATAAAGAGAGTAGGGGTGg i canFam3.chr31 C 0 I 398 a score=147695.000000 s hg38.chr21_KI270874v1_alt 93080 44 + 166743 AATATCAATCATAGC-ATGGAGGTTAtaaagtagcaattactgag s panTro4.chr21 3706699 44 + 32799110 AATATCAATCATAGC-ATGGAGGTTAtaaagtagcaattactgag i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16968848 44 + 48394510 AATATCAATCATATC-ATGGgagctataaagtagcaattactgag i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4466585 44 + 32716333 AAcatcaatcatagc-atggaggctataaagtagcaattactgag i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168582075 44 - 198365852 AAcatcaatcatagc-atagaggctataaagtagccattactgag i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162245966 44 - 192294377 AAcatcaatcatagc-atggaggctataaagtagccattactgag i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150937142 44 - 180432695 AACATCAATCATAGC-ATGGAGGCTATAAAGTAGCCATTACTGAG i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15031209 44 - 90373283 AATATCAATCATAGC-ATGGAGgctataaagtagccattactgag i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21932322 44 + 50472720 AACATCAATCACAGG-ACGGATgctataaagtagtaattactgag i calJac3.chr21 C 0 C 0 s mm10.chr16 78132895 45 + 98207768 GATAGTGTTCATGCCTATGAGTACTGCAAAGTAGTAATTAATGAG i mm10.chr16 C 0 I 39 s canFam3.chr31 13831704 43 + 39895921 AATATGCAGCACGGT-ATGAATGTTGAAAAA-AAAAATTAGTGGG i canFam3.chr31 I 398 C 0 a score=193448.000000 s hg38.chr21_KI270874v1_alt 93124 59 + 166743 gaagcttaccagacaggaggtcctgagggcagccATGCGAGAGGAGTATAATTCTGCTG s panTro4.chr21 3706743 59 + 32799110 gaagcttaccagacaggaggtcctgagggcagccATGCGAGAGGAGTATAATTCTGCTG i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16968892 59 + 48394510 ggagcttaccagacaggagggcctgacggcagccATGCGAGTGGAGTATAACTCTGCTG i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4466629 59 + 32716333 ggagcttaccagacaggagggcctgaaggcagccacgcaaaTGGAGTATAACTCTGCTG i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168582119 59 - 198365852 ggagtttaccagacaggagggcctgagggcagccATGTGAGTTGAGTATAACTCTGCTG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162246010 59 - 192294377 ggagtttaccggacaggagggcctgagggcagccATGTGAGTTGAGTATAACTCTGCTG i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150937186 59 - 180432695 GGAGTTTACCGGACAGGAGGGCCTGAGGGCAGCCATGTGAGTTGAGTATAACTCTGCTG i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15031253 59 - 90373283 ggagtttaccggacaggagggcctgagggcagccATGTGAATTGAGTATAACTCTGCTG i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21932366 59 + 50472720 ggagtttcccagacaggagggcctgagggcagccatacgagtTGAGTATAACTCTGCTG i calJac3.chr21 C 0 C 0 s canFam3.chr31 13831747 59 + 39895921 GGAGATGCCTAAGCAGGAAAGCCTGAGGGTCGTCATACAAGGTGAGTTTGCCTCTGCAT i canFam3.chr31 C 0 C 0 e mm10.chr16 78132940 39 + 98207768 I a score=303711.000000 s hg38.chr21_KI270874v1_alt 93183 93 + 166743 GGCAGGTGTAGGAAGGATGGACTGTAGAAAAGACCAGGAATTCTGCAGGTCCAG-TCACATAATTAAA--GGCACTGGT-GGGGAAAGAAATCATCA s panTro4.chr21 3706802 93 + 32799110 GGCAGGTGTAGGAAGGATGGACTGTAGAAAAGACCAGGAATTCTGCAGGTCCAG-TCACATCATTAAA--GGCATTGGT-GAGGAAAGAAATCATCA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16968951 93 + 48394510 GGCAGGAGTAGGAAGGATGGACTGTAGAAAAGACCAGGAATTCTGCAGGTCCAG-TCACATAATTAAA--GGCATTGGT-GAGGAAAGAAATCATCA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4466688 93 + 32716333 GGCAAGTGTAGGAAGGATGGACTGTAGAAAAGACCAGGAATTTTGCAGGTCCAG-TCACATAATTAAA--GGCATTGGT-GTGGAAAGAAATCATCA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168582178 93 - 198365852 GGCAGGTGTAGAAAGGATGGGCTGTAG-AAAGACCAGCAATTTTGCAGGTCCAA-TCACATAATTAAA--GGCATTGGTAGAGGAAAGAAATCATCA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162246069 93 - 192294377 GGCAGGTGTAGAAAGGATGGGCTGTAG-AAAGACCAGCAATTTTGCAGGTCCAA-TCACATAATTAAA--GGCATTGGTAGAGGAAAGAAATCATCA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150937245 92 - 180432695 GGCAGGTGTAGAAAGGATGGGCTGTAG-AAAGACCAGCAATTTTGCAGGTCCAA-TCACATAATTAAA--GGCATTGGT-GAGGAAAGAAATCATCA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15031312 93 - 90373283 GGCAGGTATAGAAAGGATGGGCTGTAGAAAAGACCAGCAATTTTGCAGGTCCAA-TCACATAATTAAC--GGCATTGGT-GAGGAAAGACGTCATCA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21932425 90 + 50472720 GGCATGT---GAAAGAATGGGCTATAGAAAAGGCCAGGAATTTTGCAGGTCCAA-CCACATAATTAAA--GGCATTGGT-GAGGAAACAAATCAGCA i calJac3.chr21 C 0 C 0 s mm10.chr16 78132979 87 + 98207768 GACTGGCACAGAAAGAATAGGCTATTGAAGGGTCCAGCTAGTACACAAGGATAACCCACATAATTAGA---------GT-GAGCAATAACTTCACCA i mm10.chr16 I 39 C 0 s canFam3.chr31 13831806 87 + 39895921 GACAGGTGCAGAAAGGGAGGGCCGAAG---AGGCCTGGAATTTTGC-----CAG-CCACACCTTTAGAGAGGCTGTGGT-GGGGAAAGAAGTCATCA i canFam3.chr31 C 0 I 13 a score=16677.000000 s hg38.chr21_KI270874v1_alt 93276 5 + 166743 AGAAT s panTro4.chr21 3706895 5 + 32799110 AGAAT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16969044 5 + 48394510 AGAAT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4466781 5 + 32716333 AGAAT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168582271 5 - 198365852 AGAAT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162246162 5 - 192294377 AGAAT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150937337 5 - 180432695 AGAAT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15031405 5 - 90373283 AGAAT i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21932515 5 + 50472720 AAAAT i calJac3.chr21 C 0 C 0 s mm10.chr16 78133066 5 + 98207768 AGAGA i mm10.chr16 C 0 C 0 e canFam3.chr31 13831893 13 + 39895921 I a score=888602.000000 s hg38.chr21_KI270874v1_alt 93281 310 + 166743 ACATGCAaagtttgtgaaggagtataaaaacacagttagataaaaagaatagagaagttctagtattcataagtagaatataaaaattatagttaacaatgacttattgtagattttaaagtagctaggaaagaaaaattgcaatgttcctaacacaaaggaaagataaatgtctaaggtggtggatatcccaattaccctgatttgatcattacacattgtatacatgtatcaaaataccatatgtaccccaaaaatatgtccagctattatatatcaataaaaGTAAACAAAATAAGAATTTTAACAA s panTro4.chr21 3706900 310 + 32799110 ACATGCAaagtttgtgaaggagtataaaaacacagttagataaaaagaatagagaagttctagtattcataagtagaatataaaaattatagttaacaatgacttattgtagattttaaagtagctaggaaagaaaaattgcaatgttcctaacacaaaggaaagataaatgtctaaggtggtggatatcccaattaccctgatttgatcattacacattgtatacatgtatcaaaataccatatgtaccccaaaaatatgtccagctattatatatcaataaaaGTAAACAAAATAAGAATTTTAACAA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16969049 310 + 48394510 ACATGCAaagtttgtgaaggagtataaaaatacagttagataaaaagaatagagaagttctagtattcataagtagaatataaaaactatagttagcaatgatttattgtagattttaaagtagctaggaaagaaaaattgcaatgttcctaacacaaaggaaagataaatgtttaaggtgatggatatcccagttaccctgatttgatcattacacattgtatacatatatcaaaataccacatgtaccccaaaaatatgtacagctattatatatcaataaaaataaaCAAAATAAGAATTTTAACAA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4466786 310 + 32716333 ACATGCAaagtttgtgaaggagtataaaaatacagttagataaaaagaatagagaagttctagtattcataagtagaatataaaaattatagttaacaatgatttattgtagattttaaagtagctaggaaagaaaaattgcaatgttcctaacacaaaggaaagataaatgtttaaggtgatggatatcccaattaccctgatttgatcattacacattgtatacacgtatcaaaataccacgtgtaccccaaaaacatgtacagctattatatatcaataaaaataaaCAAAATAAGAATTTTAACAA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168582276 306 - 198365852 ACATGCAaagtttgtgaaagagtataaaaatatggttagatagaaggaat----aagttctagtattcataagtacaatagaaaaattatagataacaatgatttattgtagattttaaagtagctcggaaagaaaaattgcaatgttcctaacacaaatgagagataaatgtttaaggcgatggatatcccaattaccctgatttgatcattacacgttgtatacacatatcaaaataccacatgcaccccaaaaatatgtacagctattatctatcaataaaaataaaCAAAATAAGAATTTTAACAA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162246167 306 - 192294377 ACATGCAaagtttgtgaaagagtataaaaatatggttagatagaaggaat----aagttctagtattcataagtacaatagaaaaattatagataacaatgatttattgtagattttaaagtagctcggaaagaaaaattgcaatgttcctaacacaaacgagagataaatgtttaaggcgatggatatcccaattaccctgatttgatcattacacgttgtatacacatatcaaaataccacatgcaccccaaaaatatgtacagctattatctatcaataaaaataaaCAAAATAAGAATTTTAACAA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150937342 306 - 180432695 ACATGCAAAGTTTGTGAAAGAGTATAAAAATAtggttagatagaaggaat----aagttctagtattcataagtacaatagaaaaattatagaTAACAATGATTTATTGTAGATTTTAAAGTAGCTAGGAAAGAAAAATTgcaatgttcctaacacaaaggagagataaatgtttaaggcgatggatatcccaattaccctgatttgatcattacacgttctatacacatatcaaaataccacatgCACCCCAAAAATACGTACAGCTATTatctatcaataaaaataaacaaaataagaattttaacaa i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15031410 306 - 90373283 ACATGCAaagtttgtgaaagagtataaaaatatggttagatagaaggaat----aagttctagtattcataagtacaatagaaaatttatagataacaatgatttattgtagattttaaagtagctaggaaagaaaaattgcaatgttcctaacacaaaggagagataaatgtttaaggtgatggatatcccaattaccctgatttgatcattacatgttgtatacatgtatcaaaataccacatgcaccccaaaaatatgtacagctattatctatcaataaaaataaaCAAAATAAGAATTTTAACAA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21932520 292 + 50472720 ATGTGCAACACTTT-------gtataacaatacagttagatagaaagaat----aagttctagtattcataagtacaatcaaaaaattatagttaacaataatttattatagatttcaaagtagctag---aaaaaaattataattttcccaacacaagggaaagataaatgttcaaggcaatggatatcccaattaccctgattttatcattatacattgtatataggtagcaaaataccacatgtaccccaaaaatatgtacagctattatatatcaataaaaaT----ACAATAAGATTTTTAACAG i calJac3.chr21 C 0 C 0 e canFam3.chr31 13831893 13 + 39895921 I e mm10.chr16 78133071 0 + 98207768 C a score=71744.000000 s hg38.chr21_KI270874v1_alt 93591 24 + 166743 AGTCAATGCAGCACAACACAACAA s panTro4.chr21 3707210 24 + 32799110 AGTCAATGCAGCACAACACAACAA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16969359 24 + 48394510 AGTCAATGCAGCACAACACAACAA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4467096 24 + 32716333 AGTCAATGcagcacaacacaacaa i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168582582 24 - 198365852 AGTCAATGcagcacaacacacaaa i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162246473 24 - 192294377 AGTCAATGCAGCACAACACACAAA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150937648 24 - 180432695 agtcaatgcagcacaacacacaaa i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15031716 24 - 90373283 AGTCAATGCAGCACGACACACAAA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21932812 24 + 50472720 AGTTGATGCAGCAGAACACACCAA i calJac3.chr21 C 0 C 0 s mm10.chr16 78133071 24 + 98207768 AGCCACAGAAGAACAAATCCCGAA i mm10.chr16 C 0 C 0 e canFam3.chr31 13831893 13 + 39895921 I a score=1230633.000000 s hg38.chr21_KI270874v1_alt 93615 390 + 166743 AAATCTGGTGGGACAACTCACACCCCAGTGGAGATCAAC--------------------TCAGGATA-CTGATAGACCATGTGGATTGAGCTACCCTGCAAAAGGCAGAGGCTAGTTCCAAAGACTAGCCGAGGT----------GTCTGGAGGT---------------------------------------------------------TAGTAACAGTG----------------ATGGAAAAAGAGCTCTggcccacatgcccctcccctagtgtcatcaggacaatttaagcttctttttgcactcaaatactgtatt-----agaaggaagagga----gaaaagaacctttgagagtggaaggaaattttgggagactg---------agtagttaccagaa-----aaaaaaaaaaataagactaatatgcagaacagactgata----catgcttaattggcaagatctcatgctatctgccctcgataag--actgtgtgcctgagaacaaa s panTro4.chr21 3707234 390 + 32799110 AAATCTGGTGGGACAACTCACACCCCAGTGGAGATCAAC--------------------TCAGGATA-CTGATAGACCACGTGGATTGAGCTACCCTGCAAAAGGCAGAGGCTAGTTCCAAAGACTAGCCGAGGT----------GTCTGGAGGT---------------------------------------------------------TAGTAACAGTG----------------ATGGAAAAAGAGCTCTggcccacatgcccctcccctagtgtcatcaggacaattaaagtttctttttgcactcaaatactgtatt-----agaaggaagagga----gaaaagaacctttgagagtggaaggaaattttgggagactg---------agtagttaccagaa-----aaaaaaaaaaataagactaatatgcagaacagactgata----catgcttaattggcaagatctcatgctatctgccctcgataag--actgtgtgcctgagaacaaa i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16969383 388 + 48394510 AAATCTGGTGGGACAACTCACACCCCAGTGGAGATCAAC--------------------TCAGGATA-CTGATAGACCATGTGGATTGAGCTACCCTGCAAAAGGCAGAGGCTAGTTCCAAAGACTAGCTGAGGT----------GTCTGGAGGT---------------------------------------------------------TAGTAAGAGTG----------------ATGGAAAAAGAGCTCTGGCCCACATGCCCCTCCTCCAGTGTCATCAGGACAATTAAAGCTTCTTTTTGCACTCAAATACTGTATT-----AGAAGGAAGAGGA----GAAAAGAACCTTTGAGAGTGGAAGGAAATTTTGAGAGACTG---------AGTAGTTACCAG-------AAAAAAAAAAATAAGACTAATGTGGAGAACTGACTGATA----CATGCTTAACTGGCAAGATCTCATGCTATCTGCCCTCAATAGG--ACTGTGTGCCTTAGAACAAA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4467120 387 + 32716333 aaatctggtgggacaactcacaccccactggagatcaac--------------------tcaggata-ctgatagaccatgtggattgagctaccctgcaaaaggcagaggctagttccaaagactagctgaggt----------gtctagaggt---------------------------------------------------------tagtaagagtg----------------atggaaaaagagctctggcccacatgcccctcccacagtgtcatcaggacaattaaagcttatttttgcactcaaatgctgtatt-----agaaggaagagga----gaaaggaacctttgagagtggaaggaaattttgagagactg---------agtagttaccag--------aaaaaaaaaataagactaatatgcagaagagactgata----catgcttaattggcaagatctcatgctatctgccctcaataca--actgtgtgcctgagaacaaa i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168582606 393 - 198365852 aaatctggtgggacaactcacggcccattggagaccaac--------------------tcagaata-ctgatagatcatgtggactgagctaccctgcaaaaggcagaggctagttccaaagactagctgaggt----------gtctggaggt---------------------------------------------------------tagtaagagtg----------------atggaaaaagagctgtggcctacatgcccctcccgcagcgtcatcaggacaattaaagcttctttttgcactcaaatactgtatt-----ggaaggaagagga----gaaaagaacttttgagagtgggaggaaattttgagagactg---------agtagttaccaaaa--aataaataaataaataagactaatatgcagaacagactgata----catgcttaattggcaagATCTCATGATATCTACCCTCAATAGG--ACTGTGTGCCTGCGAACAAA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162246497 393 - 192294377 AAATCTGGTGGGACAACTCATGGCCCATTGGAGACCAAC--------------------TCAGAATA-CTGATAGATCATGTGGACTGAGCTACCCTGCAAAAGGCAGAGGCTAGTTCCAAAGACTAGCTGAGGT----------GTCTGGAGGT---------------------------------------------------------TAGTAAGAGTG----------------ATGGAAAAAGAGCTGTGGCCTACATGcccctcccgcagcgtcatcaggacaattaaagcttctttttgcactcaaatactgtatt-----ggaaggaagagga----gaaaagaacttttgagagtgggaggaaattttgagagactg---------agtagttaccaaaa--aataaataaataaataagactaatatgcagaacagactgata----catgcttaattggcaagATCTCATGATATCTACCCTCAATAGG--ACTGTGTGCCTGCGAACAAA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150937672 393 - 180432695 aaatctgGTGGGACAACTCACGGCCCAGTGGAGACCAAC--------------------TCAGAATA-CTGATAGATCATGTGGACTGAGCTACCCTGCAAAAGGCAGAGGCTAGTTCCAAAGACTAGCTGAGGT----------GTCTGGAGGT---------------------------------------------------------TAGTAAGAGTG----------------ATGGAAAAAGAGCTGTGGCCTACGTGCCCCTCCCGCAGCGTCATCAGGACAATTAAAGCTTCTTTTTGCACTCAAATACTGTatt-----ggaaggaagagga----gaaaagcacTTTTGAGAGTGGGAGGAAATTTTGAGAGACTG---------AGTagttaccaaaa--aataaataaataaataagactaatATGCAGAACAGACTGATA----CATGCTTAATTGGCAAGATCTCATGATATCTACCCTCAATAGG--ACTGTGTGCCTGCGAACAAA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15031740 393 - 90373283 AAATCTGGTGGGACAACTCACGGCCCAGTGGAGACCAAC--------------------TCAGAATA-CTGATAGATCATGTGGACTGAGCTACCCTGCAAAAGGCAGAGGCTAGTTCCAAAGACTAGCTGAGGT----------GTCTGAAGGT---------------------------------------------------------TAGTAAGAGTG----------------ATGGAAAAAGGGCTGTGGCCTACATGCCCCTCCCACAGTGTCATCAGGACAATCAAAGCTTCTTTTTGCACTCAAATACTGTATC-----GGAAGGAAGAGGA----GAAAAGAAACTTTGAGAGTGGGAGGAAATTTTGAGACACTG---------AGCAGTTACCAAAA--AATAAAGAAATAAATAAGACTAATATGCAGAACAGACTGATA----CATGCTTAACTGGCAAGATCTCATGATATCTACCCTCAATAGG--ACTGTGTGCCTGCAAACAAA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21932836 401 + 50472720 AAATCTGGTGGGATAACTCACACTCCAGTAGAGATCAACTCAGGATACTGATCTATCTATCAGGATA-CTGATAGACCACGTGGATTGAGCTACCCTGCAAAAGGCAGAGG-TAGTGCCAAAGACTAGCTGAGGT----------GTCTGGAGGT---------------------------------------------------------TAGCAAGAGTG----------------ACAGAAAAAGAGCTGTGGCCCACATGGCCCCCCTCCAGTGTCATCAGGAC-ATTAAAGCTTCTCTTTGCATTGAAATACTGTATT------GAAAGAAGAGGA----GAAAAGAAAC-TTAATGGTGGAAGGAAATTTTGAGAGACTG---------AGTAGTTAACAG----------CAAAAAAATAAGACTAATATTCAAAACAGACTGATT----CATGCTTAGTTGGCAAGATCTCGTGATATCTGCCCTCAATAGG--ACTGTGTGCCTGAGAATAAA i calJac3.chr21 C 0 C 0 s mm10.chr16 78133095 441 + 98207768 AA--CTGGTGAGACAAATTACACTTAAGTGGAGATCAAA--------------------TCATTATA-TGAACAGAAAATATAGACCAGAATATTGTGCAAATGACAGAGA--GATGCCAAACAC-AGGTGAGGTAAGCATGGGGGGCTGGGTGTCACAGCCAAAATGGTCCTCTTCAAATGGCATAAAAGACATAAGACAGAGGAGTACCATAGCCAAAGTAGCCCCCTTCTAAAGACATAAGAGAAGTACTATGGCCAATGTGGCCCTCTTATGATGCTATGAAGACA--TAAAGTTTCATTCTGCATAAAAATGTCATCTTT----GGTAGGAAAAGGAAGAGGACAAGATCACTTGAGA-----AGAAAATTTAGCAATAAAGCAAAATGACAGTATTTGCTAT-------GAACAAGTGATCTA---TAATATGTAG------------------TGTTTAAATGGCAAACTCTT-----------------TAGGCCACTGGCTACCTGAGAACTCA i mm10.chr16 C 0 C 0 s canFam3.chr31 13831906 400 + 39895921 AACCACCGCGGGACAATGCACACCTCAGCGGAGACCAGC--------------------GCAGGAGAGCTGATGCA-CAGGTGAGCCAGCCTACC-TGCAAAAGACAGAGACGGGCCCCGAAGACCTGGAGAAGC---------GGGCTGCACAA---------------------------------------------------------CAGCGAGAGCG---AGTGGTCGGGGCCACAGGAGAAGGACTGCggtccggatgcccctccc-cacggccccaaggac-acaaaagcttccttctgcccccagatgacccccttgggaaggaggagaggga----gaagagaagccttaaaag----agaaaattttgagagactg---------agaaattaccaaaaaaaacaaacaaaaaaaaaagactgacactaacaacagactgataacgttaagtttAAAAAGCATGAGAATAGACCAACCCCCCTCAA------A-------CCTGAGAACAGA i canFam3.chr31 I 13 I 1557 a score=470075.000000 s hg38.chr21_KI270874v1_alt 94005 132 + 166743 atgagatgttatagaacacaaaCATCTCGTTTATA----ATTTACCTTACATTTCTGTTTCTCAATTAATGATGATTCAAACTGAACTTCACTGTATATATATAGTCATGCAATTTGGGCTAAAATGTGAGAAGCC s panTro4.chr21 3707624 136 + 32799110 atgagatgttatagaacacaaaCACCTCATTTATAATTTATTTACCTTACATTTCTGTTTCTCAATTAATGATGATTCAAACTGAACTTCACTGTATATATATAGTCATGCAATTTGGGCTAAAATGTGAGAAGCC i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16969771 136 + 48394510 ATGAGATGTTATAGAACACAAACATCTCATTTATAATTTATTTCCCTTACATTTCTGTTTCTCAATTAATGATGATTCAAACTGAACTTCACTATATATATATAGTCATGCAATTTGGGCTAAAATATGAGAAGCC i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4467507 136 + 32716333 atgagatgttatagaacacaaaCATCTCGTTTATAATTTATTTACCTTACATTTCTGTTTCTCAATTAATGATGATTCAAACTGAATTTCACTATATATATATAGTCACGCAATTTGGGCTAAAATGAGAGAAGCC i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168582999 134 - 198365852 ATGACATGTTACAGAACACAAACATCTTGTTTATAATTTATTTACCTTACATTTCTGTTTCCCAATTAATGATGATTCAAACTGAACTTCAC--TATATACATAGCCATGCAATTTGGGCTAAAATGTGAGAAGCC i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162246890 134 - 192294377 ATGACATGTTACAGAACACAAACATCTTGTTTATAATTTATTTACCTTACATTTCTGTTTCCCAATTAATGATGATTCAAACTGAACTTCAC--CATATACATAGCCATGCAATTTGGGCTAAAATGTGAGAAGCC i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150938065 134 - 180432695 ATGACATGTTACAGAACACAAACATCTCgtttataatttatttacctTACATTTCTGTTTCCCAATTAATGATGATTCAAACTGAACTTCAC--TATATACATAGCCATGCAATTTGGGCTAAAATGTGAGAAGCC i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15032133 134 - 90373283 ATGAGATGTTACAGAACATAAACATCTCGTTTATAATTTATTTACCTTACATTTCTGCTTCCCAATTAATGATGATTCAAACTGAACTTCAC--TATATACATAGCCATGCAATTTGGGCTACAATGTGAGAAGCC i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21933237 130 + 50472720 ---AGATGTTATTGAGCACAAACATATCATTTATAATTTATTTACCTTACATTTCT-CTTCCCAATTAATGATGATTCAAACTGAACTTCAC--TGTATACATGGTCATGCAATTTGGGGTAAAATATGAGAAGCC i calJac3.chr21 C 0 C 0 s mm10.chr16 78133536 113 + 98207768 GTGAAATATTAGTAGCTATAAACACCTCACTTATA-----------TTGATTTTCTGCTTCCCAGTTTGTGATCATCCAAACCAGTCTTTAC--CATATAGATGTTCACA----------TAGAATATGAGAAGCC i mm10.chr16 C 0 I 315 s canFam3.chr31 13833863 111 + 39895921 ATGAGATATGATAGAACATAGAG-----------------------CTACATTTCTGCTTCCCAACTTGTGACTGTTCAAACTGAACTTCAC--CATGTGCATAGTGATTCAATTTGGGGTAGAATATGAAAGGCC i canFam3.chr31 I 1557 C 0 a score=1917269.000000 s hg38.chr21_KI270874v1_alt 94137 602 + 166743 AATAGGACATCCATGGAAAGATGGCCCAGTATGTctaaagacatagatttggaagttattggcatataggtcatgttggagtcatgtaagtgaatgaattatcaagggcagaaagaagagag------aggaaaaaaggtagaactcctgagtaacaccaatagttatgggatgtagacagagaaattactagaaggaata----aacagagaggttggaaggtaatctagacaccgtggtgcatgcagaaaacctaagaggagagaaaataattctaaagcgggaataatcaatactgccaaattctgcagaaggggaaaaa-taaggataaggacagaaaagtggccaatagagtctgtatcataaaTCCAGAGAGAGAAGAG-AAAAAA----------ACTAAGACTACAGGTCTATTGTGCCAT-CAATGACTTGAGATATTGCCTTAATACTGGCTAACAGAGAT-ATTGTGTCTAACTGAACATCCTAGGAAGTTAATACAGAGGTTACTTCTTC----TTATGCATATTTGAATAATATTAAATATATTCATATAGCTATTAAAAAGTATAAGACAGCTATATAGTAAATTTACACTAGTATTTTATGAGCAGGAGGATATC s panTro4.chr21 3707760 603 + 32799110 AATAGGACATCCATGGAAAGATGGCCCAGTATGTctaaagacatagatttggaagttattggcatacaggtcatgttggagtcatgtaagtgaatgaattatcaagggcagaaagaagagag------aggaaaaaaggtagaactcctgagtaacaccaatagttatgggatgtagacagagaaattactagaaggaata----aacagagaggttggaaggtaatctagacaccgtggtgcatgcagaaaacctaagaggagagaaaataattctaaagcgggaataatcaatactgccaaattctgcagaaggggaaaaa-taaggataaggacagaaaagtggccaatagaGTCTGTTTCATAAATCCAGAGAGAAAAGAGAAAAAAA----------ACTAAGACTACAGGTCTATTGTGCCAT-CAATGACTTGAGATATTGCCTTAATACTGGCTAACAGAGAT-ATTGTGTCTAACTGAACATCCTAGGAAGTTAATACAGAGGTTACTTCTTC----TTATGCATATTTGAATAATATTAAATATATTCATATAGCTATTAAAAAGTATAAGACAGCTATATAGTAAATTTACACTAGTATTTTATGAGCAGGAGGATATC i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16969907 603 + 48394510 AATAGGACATCCATGGAAAGATGGCCCAGTATGTctaaagacatagatttggaagttattggcatacaggtcatgttggagtaatgtaagtgaacaaattatcaagggcagaaagaagagag------aggaaaaaaggtagaactcctgagtaacaccaatagttatgggatgtagacagagaaattactagaaggaata----aacagagaggttggaaggtaatgtagacaccgtggtgcatgcagaaaacctaataggagagaaaataattctaaagagggaataatcaatactgccaaattctgcagaaggggaaaaa-taaggataaggacagaaaattggccaatagaGTCTGTTCCATAAATCCAGAGAGAGAAGAGAAAAAAT----------CCTAAGACTACAGGTCTGTTGTGCCAT-CAGTGACTTGAGATATTGCCTTAATACTGGCTAACAGAGAT-ATTATGTCTAACTGAACATCTTAGGAAGTTAATACAGAGGTTACTTCTTC----TTATGCATATTTGAATAATATCAAATATATTCATATAGCTATTAAAAATTATAAGACAGCAATATCGTAAATTTACATTAGTATTTTATGAGCAGGAGCATATC i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4467643 603 + 32716333 AATAGGACATCCATGGAAAGATGGCCCAGTTTGTctaaagacatagatttggaagttattggcatacaggtcatgttggagtcacgtaagtgaacgaattatcaagggcagaaagaagagag------aggaaaaaaggtagaactcctgagtaacaccaatagttatgggatgtagacagagaaattactagaaggaata----aacagagaggttggaaggtaatctagacaccgtggtgcatgcagaaaacctaagaggagagaaaataattctaaagagggaataatcaatactgccaaattctgcagaaggggaaaaa-taagaataaggacagaaaagtggccaatagaGTCTGTTTCATAAATCCAGAGAGAGAAGAGAAAAAAA----------CCTGAGACTACAGGTCTGTTATGCCAT-CAGTGACTTGAGATATTGCCTTAATACTGGCTAACAGAGAT-ATTATGTCTAACTGAACATCTTAGGAAGTTAATACAGAGGTTACTTCTTC----TTATGCATATTTGAATAATATCAAATATATTCATGTAGCTATTAAAAAGTATAAGACAGCTATATAGTAAATTTACACTAATATTTTATGAGGAGGAGCATATC i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168583133 603 - 198365852 AATAGGACATCCATGGAAAGATGACCTAGTATACctaaagacatagatttgcaagttattggcatacaggtcatgttggagtcatggaagtgaatgaattataaagggtagaaagaagagag------aggaaaaaa-gtagaactcctgagtaataccaaaaattatgggatgtagacagagaaattaccagaaggaata----aacagagaggttggaaggtaaactagacactgtggtgcatgcagaaaacctaacaggagagaaaacaaatctaaagaggaaataatcaatactgtcaaattctgcagaaggaaaaaaactaaggataaggacagaaaagtggccaatagaGTCTGTTTCATAAATCTAGAGAGAGAAGAGGAAAAAG----------CCTAAGATTACAGGTCTGTTCTGCCAT-CAGTGACTTGAGATCTTGCCTGAATACTGGCTAACAGAGAT-ATTATGTCTAACTAAACATCTTAGGAAGTTAACACAGAGGTTACTTCTTC----TTATGCATATTTGAAGAATATCAAATATATTCATATAGCTATTAAAGAGTATAAGACAGCTATATAATAAATTTACACTAGCATTTTATGAGGAAGAGTATCTC i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162247024 603 - 192294377 AATAGGACATCCATGGAAAGATGACCTAGTATACctaaagacatagatttgcaagttattggcatacaggtcatgttggagtcatggaagtgaatgaattataaagggtagaaagaagagag------aggaaaaaa-gtagaactcctgagtaataccaaaaattatgggatgtagacagagaaattaccagaaggaata----aacagagaggttggaaggtaatctagacactgtagtgcatgcagaaaacctaacaggagagaaaacaaatctaaagagggaataatcaatactgccaaattctgcagaaggaaaaaaactaaggataaggacagaaaagtggccaatagaGTCTGTTTCATAAATCTAGAGAGAGAAGAGGAAAAAG----------CCTAAGATTACAGGTCTGTTCTGCCAT-CAGTGACTTGAGATCTTGCCTGAATACTGGCTAACAGAGAT-ATTATGTCTAACTAAACATCTTAGGAAGTTAACACAGAGGTTACTTCTTC----TTATGCATATTTGAAGAATATCAAATATATTCATATAGCTATTAAAGAGTATAAGACAGCTATATAATAAATTTACACTAGCATTTTATGAGGAAGAGTATCTC i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150938199 600 - 180432695 AATAGGACATCCATGGAAAGATGACCTAGTATACCTAAAGACATAGATTTGCAAGTTATTGGCATACAGGTCATGTTGGAGTCATGGAAGTGAATGAATTATAAAgggcagaaagaagagag------aggaaaaaa-gtagAACTCCTGGGTAATACCAATAATTATGGGATATAGACAGAGAAATTACCAGAAGGAATA----AACAGAGAGGTTGGAAAGTAATCTAGACAATGTGGTGCATGCAGAAAACCTAACAGgagagaaaacaattctaaagaGGGAATAATCAATACTGCCAAATTCTGCAGAAGGGAAAAAACTAAGGATAAGGACAGAAAAGTGGCCAATAGAGTCTGTTTCATAAatccagagagagaagaggaaaaag----------ccTAAGACTACAGGATTGTTCTGCCAT-CAGTGACTTGAGATCTTGCCTGAATACTGGCTAACAGAGAT-ATTATGTCTAACTAAACATCTTAGGAAGTTAACACAGAGGTTACTTCTTC----TTATGCATATTTGAAGAATATCAAATATATTCATATAGCTATTAAAAAGTATAAGACAGCTATATAGTAAATTTACACTAGCGTTTTATGAG---GAGTATCTC i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15032267 603 - 90373283 AATAAGACATCCATGGAAAGATGGCCTAGTATACctaaagacatagatttgcaagttattggcatacaggtcatgttggagtcatggaagtgaatgaattataaagggcagaaagaagagag------aggaaaaaa-gtagaactcctgggtaataccaataattatgggatgtagacagagaaattaccagaaggaata----aacagagaggttggaaagtaatctagacaatgtggtgcatgcagaaaacctaacaggagagaaaacaattctaaagagggaataatcaatactgccaaattctgcagaagggaaaaaactaaggataaggacagaaaagtggccaatagaGTCTGTCTCATAAATCCAGAGAGAGAAGAGGAAAAAG----------CCTAAGACTACAGGATTGTTCTGCCAT-CAGTGACTTGAGATCTTGCCTGAATACTGGCTAACAGAGAT-ATTATGTCTAACTAAACATCTTAGGAAGTTAACACAGAGGTTACTTCTTC----TTATGCATATTTGAAGAATATCAAATATATTCATATAGCTATTAAAAAGTATAAGACAGCTATATAGTAAATTTACACTAGCATTTTATGAGGAGGAGTATCTC i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21933367 574 + 50472720 AATAGGACATCCATGAAAAGATGGCTCAGTATGTCT-Aagacacgtacttggaagttattggcaaacaggtcatgttagagtcatggaagtgtata---------------aaagaagagag------aggaaaatg-gtaaaattcctgagtaacaccaatagttataggatatagacagagaaattactagaaggaata----aacagagaggttggaaggtaatccagacattgtgg----tgcagaaaacctagaaggagagaaaatatttctaaacagggaataatcaatactgccaaattattcagaagggaaaaaa-taagggtaaggacagaaaagaggccagt--agTCTGTTTTATAAAGCCGGAAAGAAAAGAG-AAAAAA----------CCTAAGTCTACAGGTCTGTTGTGCTATCCAGTGACTTGAGATCTTGCCT-AATACTGGCTAGCAGAGAA-ATTATGTCTCACTAAACATCTTAGAAAGTTAAT--AGAGGTTA---CTTC----TTATGCATATTTGAATAATGTAAAATATATTCATATAGCTATTAAAAACAATAAGGCAGCTATATATTAAATTTACACTACAATTTTATGAGCAGGAGTATATC i calJac3.chr21 C 0 C 0 s canFam3.chr31 13833974 588 + 39895921 TATAGGATAT------------------ATTTGTCTACAGAAA--GATTTGGAAGTCATTGGTATATATGTCATGCTGGAATAATGGATGTAGATAAAGTAGCAACAGCAGAAGGTGGAGAATAACATAGAAGGAAAAGTCAGAAACATGGGTAACATCCATATTTAAAGGAAAGAGAGGGAGAAATTACTAGAAGAAACAAAGGAACAAACAGATTGGAAAGTAATCCTGAGACTAGGGTA---ACAGAAAAACTGAGAG--GAGGAAATCATTCTAAAAAGAGAACAATTAACACTGGCAAATTCTTCGG--GGAAAACAG-ATAGGATACAGACAGAAAAGAGGCCATTAGAGTATTTTCCCTAAAGGCAAAGGAAGGAAGGAAGGAAAAGGAAAGTGTCCTAAATCAACAAGTCTGTTGTTCTGT-CAATTCCTTAACACCTTGCCT-AATACTGGCTAA-GGAGATAATTGTGTCTA----AACATCCTAGGAACTTATTA-AGAGTTTATATCTTCTATGTTACACATATTTGAATAGCATTAAATATATTTATTCAGCTATTTAAAAAT----GACAGCTAT-TAGTAAA-TTACATTAGTATTTTATGAGCATAAATATATC i canFam3.chr31 C 0 I 189 e mm10.chr16 78133649 315 + 98207768 I a score=536583.000000 s hg38.chr21_KI270874v1_alt 94739 158 + 166743 CAACTGGGT-----------------------------------------------TTCATTTATTCACTTTCATCAAAAAGCTACAAATAAGACACTGTCCATTTGTGTTACAATTCTTTGTATGCCTGTTGGTCCATTCTCTGTACTAGTTATTTGCAAT---TAAATGAGTCAAGAAGAGAGAATGGAAGAAACTGATGAGAAAA s panTro4.chr21 3708363 157 + 32799110 CAACTGGGT-----------------------------------------------TTCATTTATTCACTTTCATCAAAAAGCTACAAATAAGACACTGTCCATTTGTGTTACAATTCTTTGTATGCCTGTTGGTCCATTCTCTGTACTAGTTATTTGCAAT---T-AATGAGTCAAGAAGAGAGAATGGAAGAAACTGATGAGAAAA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16970510 158 + 48394510 CAACTGGGT-----------------------------------------------TTCATTTCTTCACTTTCATCAAAAAGCTACAAATAAGACACTGTCCATTTGTGTTACACTTCTTTGTATGCCTGTTGGTCCATTCTCTGTACTAGTTATTTGCAAT---TAAATGAGTCAAGAAGAGAGAATAGAAGAAACTGATGAGAAAA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4468246 158 + 32716333 CAACTGGGT-----------------------------------------------TTCATTTCTTCACTTTCATCAAAAAGCTACAAATAAGACACTATCCATTTGTGTTACAATTCTTTGTATGCCTGTTGGTCCATTCTCTGTACTAGTTATTTGCAAT---TAAATGAGTCAAGAAGAGAGAATAGAAGAAACTGATGAGAAAA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168583736 158 - 198365852 CAACTGGGT-----------------------------------------------CTCATTTCTTCACTTTCATCAAAAAGCTACAAATAAGACACTGTCCATTTGTGTCACAATTCCTTGTATGCCTGCTGGTCCATTCTCTGTACTAGTTATTTGCAAT---TAAATGAGTCAAGAAGAGAGAATAGAAGAAATTGGTGAGAAAA i rheMac3.chr3 C 0 I 30 s macFas5.chr3 162247627 158 - 192294377 CAACTGGGT-----------------------------------------------CTCATTTCTTCACTTTCATCAAAAAGCTACAAATAAGACACTGTCCATTTGTGTCACAATTCCTTGTATGCCTGCTGGTCCATTCTCTGTACTAGTTATTTGCAAT---TAAATGAGTCAAGAAGAGAGAATAGAAGAAATTGGTGAGAaaa i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150938799 158 - 180432695 CAACTGGGT-----------------------------------------------TTCATTTCTTCACTTTCATCAAAAAGCTACAAATAAGACACTGTCCATTTGTGTCACAATTCCTTGTATGCCTGCTGGTCCATTCTCTGTACTAGTTATTTGCAAT---TAAATGAGTCAAGAAGAGAGAATAGAAGAAATtggtgagaaaa i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15032870 158 - 90373283 CAACTGGGT-----------------------------------------------TTCATTTCTTCACTTTCGTCAGAAAGCTACAAATAAGACACTGTCCATTTGTGTCACAATTCCTTGTATGCCTGCTGGTCCATTCTCTGTACTAGTTATTTGCAAT---TAAATGAGTCAAGAAGAGAGAATAGAAGAAATTGGTGAGAAAA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21933941 158 + 50472720 CAACTGGGT-----------------------------------------------TTCATTTCTTTACTTTCATCAAAAAGCTACAAAAAAGATAGTGTCCATTTGTATTACAATTCCTTGTATGCTTGTCCATCTCTTCTCTGTACTAGGTATTTGCAAT---TAAATGAGCCAGGAAGAGAGGATAGAAGAAACTGATGAAAACA i calJac3.chr21 C 0 I 5 s canFam3.chr31 13834751 204 + 39895921 caactgagccactcaggcgccccTCTATCAGGGTTTAAATGCATGGTTCTTCAGTGTTCATTTCTTCACTTTCATCAAAAAGTTACAAATAGGACTGTGCTCATTTCTGTTACAGTGGATTGTATACC----AGTCCATGCTCTCTAATATCTATTTGCCCTCAATAAATGAGACAGCAAGAAAGGAGAGAAGAAACTTACGCGAGAA i canFam3.chr31 I 189 C 0 e mm10.chr16 78133649 315 + 98207768 I a score=22868.000000 s hg38.chr21_KI270874v1_alt 94897 24 + 166743 ------------AG-----TACACTTTGGTACCAAAGTGTA s panTro4.chr21 3708520 24 + 32799110 ------------AG-----TACACTTTGGTACCAAAGTGTA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16970668 24 + 48394510 ------------AG-----TACACTTTGGTACCAAAGTGTA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4468404 24 + 32716333 ------------AG-----TACACTTTGGTACCAAAGTGTA i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162247785 22 - 192294377 -------------------ttaaatttataatataaatata i macFas5.chr3 C 0 I 2 s papAnu2.chr3 150938957 22 - 180432695 -------------------ttaaatttataatataaatata i papAnu2.chr3 C 0 I 2 s chlSab2.chr2 15033028 29 - 90373283 ------------AGAACAGTACACTTTGGTAGCAAAGTGTA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21934104 24 + 50472720 ------------AG-----CACACTTTGGTACCAAAGTGTT i calJac3.chr21 I 5 C 0 s canFam3.chr31 13834955 33 + 39895921 AAAAAAAAAAACAA-----AACACTTTGGTACTGAGAT--- i canFam3.chr31 C 0 C 0 e mm10.chr16 78133649 315 + 98207768 I e rheMac3.chr3 168583894 30 - 198365852 I a score=287306.000000 s hg38.chr21_KI270874v1_alt 94921 81 + 166743 CCAAATATTTATATTAAATAATTTTCTGTTGGTAACATTCAAATTTCTCACTGTCAGCAAAACTTCAGCAGAAATTTCAGA s panTro4.chr21 3708544 81 + 32799110 CCaaatatttatattaaataattttCTGTTGGTAACATTCAAATTTCTCACTGTCAGCAAAACTTCAGCAGAAATTTCAGA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16970692 81 + 48394510 CCaaatatttatattaaataattttCTGTTGGTAACATTTAAATTTCTCACTGTCAGCAAAACTTCAGCAGAAATTTCAGA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4468428 81 + 32716333 CCAAATATTTATATTAAATAATTTTCTGTTGGTAACATTCAAATTTCTCACTGTCAGCCAAACTTCAGCAGAAATGTCAGA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168583924 81 - 198365852 CCaaatatttatattaaataattttCTATTTGTAACATTCAAATTTCTCACTGTCAGCAAAACTTCAGCAGAAATTTCAGA i rheMac3.chr3 I 30 C 0 s macFas5.chr3 162247809 81 - 192294377 ccaaatatttatattaaataattttctatttgtaacattcaaatttCTCACTGTCAGCAAAACTTCAGCAGAAATTTCAGA i macFas5.chr3 I 2 C 0 s papAnu2.chr3 150938981 81 - 180432695 ccaaatatttatattaaataattttctatttgtaaCATTCAAATTTCTCACTGTCAGCAAAACTTCAGCAGAAATTTCAGA i papAnu2.chr3 I 2 C 0 s chlSab2.chr2 15033057 81 - 90373283 CCAAATATTTATATTAAATAATTTTCTATTTGTAACATTCAAATTTCTCACTGTCAGCAAAACTTCAGCAGAAATGTCAGA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21934128 81 + 50472720 CCaaatatttatattaaataattttCTGTTTGTAACATTCAAATTTCTCACTGTCAGCCAAACTTCAGCAGAAATTTCAGA i calJac3.chr21 C 0 C 0 s canFam3.chr31 13834988 70 + 39895921 -------TTTATGTCAATTACT----TGTTTTTAATATTGAAATTTCTTACTGTCAGCAAACTTGTATCAAAAATTTCAGA i canFam3.chr31 C 0 I 168 e mm10.chr16 78133649 315 + 98207768 I a score=998103.000000 s hg38.chr21_KI270874v1_alt 95002 306 + 166743 TCATG----------------------------------------------------ATGGTTGATGTGACTTGGTGCCCAAAAGTAACTGTGCTTAAGTTACATAAATAACTAAAGCCTGTCACAGA-T---------------------------------------------------------------------GTTTTTATCTA--CTAGCCCATGATCTATTTTATCTTTGAACTTAAGGAGTCCAAAAAGATTTGTCCAGAGACATGTTGTGTTTATAGGTGCAGTCTAGTGGGCATGCTGAGTATCTA-TTTTTCTAAACACACTATGTTGCATCCTGATTAAGTCATTTATATGCAAATGTTACACTGAATGAGATACCTGGTTTTTAAGGCTTCTCCATTGTGCATAACGCCTCCATCAT s panTro4.chr21 3708625 306 + 32799110 TCATG----------------------------------------------------ATGGTTGATGTGACTTGGTGCCCAAAAGTAACTGTGCTTAAGTTACATAAATAACTAAAGCCTGTCACAGA-T---------------------------------------------------------------------GTTTTTATCTA--CTAGCCCATGATCTATTTTATCTTTGAACTTAAGGAGTCCAAAAAGATTTGTCCAGAGACATGTTGTGTTTATAGGCGTAGTCTAGTGGGCATGCTGAGTATCTA-TTTTTCTAAACACACTATGTTGCATCCTGATTAAGTCATTTATATGCAAATGTTACACTGAATGAGATACCTGGTTTTTAAGGCTTCTCCATTGTGCATAACGCCTCCATCAT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16970773 307 + 48394510 TCATG----------------------------------------------------ATGGTTGATGTGACTTGGTATCCAAAAGTAACTGTGCTTAAGTTACATAAATAACTAAAGTCTGTCACAGATT---------------------------------------------------------------------TTTTTTATCTA--CTAGCCCATGATCTAATTTTTCTTTGAACTTAAGGAGTCCACaaagatttgtccagagacatgttgtgtttataggcatagtctagtgggcatgctgagtatcta-tttttctaaacacactatgttgcatcctgattaagtcaTTTATATGCAAATTTTACACTGAATGAGATATCTGGTTTTCAAGCCTTCTCCATTGTGCATAACGCCTCCATCAT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4468509 307 + 32716333 TCATG----------------------------------------------------ACGGTTGATGTGACTTGGTGCCCAAAAGTAACTGTGCTTAAGTTACATAAATAGCTAAAGTCTGTCACAGA-T---------------------------------------------------------------------TTTTTTATCTA--CTAGCCCATGATCTAATTTTTCTTTGAACTTAAGGAGTCCAAAAAGATTTGTCCAGAGACATGTTGTGTTTATAGGCGTAGTCTAGTGGGCATGCTGAGTATCTATTTTTTCTAAACACACTATGTTGCATGTTGATTAAATCATTTATATGCAAATGTTACACTGAATGAGATACCTGGTTTTTAAGCTTTCTCCATTGTGCATAACGCCTCCATCAT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168584005 306 - 198365852 TCATG----------------------------------------------------ATGGTTGATGTGACTTGGTGCCCCAAAGTAACTGTGTTTAAGTTACATAAATAACTAAAGTCTGTCACAGA-T---------------------------------------------------------------------TTTTTTATCTA--CTAGCCTGTGATCAAATTTTTCTTTGAACTTAAGGAGTCCAAAAAGATTTGTCCAGAGACATGTTATGTTTATAGGCGTAGTCTAGTGGGCATGCTGAGTACCTA-TTTTTCTAAACACACTATGTTGCATCCTGATTGAGTCATTTATATGCAAATGTTATACTGAATGAGATACCTGGTTTTTAAGACTTCTCCATTGTGCGTGACGCCTCCATTTT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162247890 306 - 192294377 TCATG----------------------------------------------------ATGGTTGATGTGACTTGGTGCCCCAAAGTAACTGTGTTTAAGTTACATAAATAACTAAAGTCTGTCACAGA-T---------------------------------------------------------------------TTTTTTATCTA--CTAGCCTGTGATCAAATTTTTCTTTGAACTTAAGGAGTCCAAAAAGATTTGTCCAGAGACATGTTATGTTTATAGGCGTAGTCTAGTGGGCATGCTGAGTACCTA-TTTTTCTAAACACACTATGTTGCATCCTGATTGAGTCATTTATATGCAAATGTTATACTGAATGAGATACCTGGTTTTTAAGACTTCTCCATTGTGCGTGACGCCTCCATTAT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150939062 306 - 180432695 TCATG----------------------------------------------------ATGGTTGATGTGACTTGGTGCCCCAAAGTAACTGTGTTTAAGTTACATAACTAACTAAAGTCTGTCACAGA-t---------------------------------------------------------------------ttttttATCTA--CTAGCCTGTGatcaaatttttctttgaacTTAAGGAGTCCAAAAAGATTTGTCCAGAGACATGTTATGTTTATAGGCGTAGTCTAGTGGGCACGCTGAGTACCTA-TTTTTCTAAACACACTATGTTGCATCCTGATTGAGTCATTTATATGCAAATGTTATACTGAATGAGATACCTGGTTTTTAAGACTTCTCCATTGTGCGTGACGCCTCCATTAT i papAnu2.chr3 C 0 I 4778 s chlSab2.chr2 15033138 306 - 90373283 TCATG----------------------------------------------------AAGGCTGATGTGACTTGGTGCCCCAAAGTAACTGTGTTTAAGTTACATAAATAACTAAAGTCTGTCACAGA-T---------------------------------------------------------------------TTTTTTATCTA--CTAGCCTGTGATCAAATTTTTCTTTGAACTTAAGGAGTCCAAAAAGATTTGTCCGGAGACATGTTATGTTTATAGGCGTAGTTTAGTGGGCACGCTGAGTACCTA-TTTTTCTAAACACACTATGTTGCATCCTGATTGAGTCATTTATATGCAAATATTATACTGAATGAGATACCTGGTTTTTAAGACTTCTCCATTGTGCATGACGCCTCCATTAT i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21934209 308 + 50472720 TCATG----------------------------------------------------ATGGCTGCTGTGACCTGGTGCCCAAAAGTAACTGTGTTTAAGATATCTAAATGACTAAAGTCTGTGACAGA-C-------------------------------------------------------------------TATTTTTAATCTA--CTAACCCATGATCTAATTTTTCTTTGAACTTAAAGAGTCCAAAAATATTTGTCCagagacatgttatgtttataggagtagtctagtgggcatgctaggtatctg-tttttctaaacacactatattgtatcttgattaagtcaTTTATATGCAAATATTATACTGAATTGGATACCTGGTCTTGAAGGCTTCTCCATTGTGCATGACGCCTCCATCAT i calJac3.chr21 C 0 C 0 s canFam3.chr31 13835226 418 + 39895921 tcatgaataaataaataaataaataaataaataaataaataaataaatCAGAATTTCATGGTTTATATGGCTTCAAGCCCAAAAGAAATTATACTTCACTTATATAAATGATTAAAGTCTATGACAGA-TGACTACAGCTAAGAAGATCACAAAATGAAGTAGCAGTATTAATCATACAATAAATGGAATCATTTGGTCTCATTTATTTGACCTAGACCATGATCTAATTTTTCTTTGAACTTAAGGAGTT---AATTGTTTGTGCAGAGAGATAGTGTGTTGGTAGGGATAGTCTAATGGGTATGCAGGGTATCTA-TTTCTGTAAATTTACTGTGTT------TGATTAAGTCCTTTATGCACAACTGTTAG--TAAATGGGATGCCTTGTCTATAAGACTTCTATTTTCTGGGTTTTGACCCCATTGT i canFam3.chr31 I 168 C 0 e mm10.chr16 78133649 315 + 98207768 I a score=2502712.000000 s hg38.chr21_KI270874v1_alt 95308 750 + 166743 AAACGTTGCTCACATGTTTAGATATTTATTCCTCACTGAGATATTTTTATCATCGATTGACAGAAATATACCAGTGATTGCTCAGTACTATATACTATGCCAATTTTCAAATAGTCTAATGG---GATAGAGCCTTCATGTCATTAAAGCACAAGTTTAC---AGAAACATAACTGCCCC-GGGATTAGAAGATAATTTTAGTAGTC-TTTGGGAATTTCATCCTTAACATTTAGGTTGGGGAAAGGGATTCCAGACACAAAG----------------------------------------------------TCTGTCCCCTACCTTGAGAACAAAGTCTGAGAGTGTTATCCTGTGCACTCTAACGTTTTGCACAAAAATGTGTTACATTGAAGCAGATCACTCCAAGCCTGGGATCTAAtggagtgggtctgaggtatgccaccccc-aagtacctttcttgaccaatgca--------tcagcttttgggagtattggctgctaatagctcacagctaagtgtttctcctggcatgtggaaaccatctaacccaaagttatgctccgccctaggg-----gcagtttatatccagtggctggttaactggcaaggtggaaagatgagagtaagaaaaccaatc--ctttatgttttaatttgggacaaatctgaagatcc--ataaactccagagcttctttgttgcaatcacaaggcattttcaacctctccctctgcctcatcctgcttctttcaatcctttctaatctaatt-------------tctgagagcattcatccataaaatttctgcaagcaaatctccacctc s panTro4.chr21 3708931 750 + 32799110 AAACGTTGCTCATATGTTTAGATATTTATTCCTCACTGAGATATTTTTATCATCGATTGACAGAAATATACCAGTGATTGCTCAGTACTATATACTATGCCAATTTTCAAATAGTCTAATGG---GATAGAGCCTTCATGTCATTAAAGCACAAGTTTAC---AGAAACATAACCGCCCC-GGGATTAGAAGATAATTTTAGTAGTC-TTTGGGAATTTCATCCTTAACATTTAGGTTGGGGAAAGGGATTCAAGACACAAAG----------------------------------------------------TCTGTCCCCTACCTTGAGAACAATGCCTGAGAGTGTTATCCTGTGCACTCTAATGTTTTGCACAAAAATGTGTTACATTGAAGCAGATCACTCCAAGCCTGGGATCTAAtggagtaggtctgaggtatgccacccac-aagtacctttcttgaccagtgca--------tcagcttttgggagtattggctgctaatagctcacagctaagtgtttctcctggcatgtggaaaccatctaactcaacgttatgctccgccctaggg-----gcagtttacatccagtggctggttaactggcaaggtggaaagatgagagtaagaaaaccaatc--ctttatgttttaatttgggacaaatctgaagatcc--ataaactccagagcttctttgttgcaatcacaaggcattttcaacctctccctctgcctcatcctgcttctttcaatcctttctaatctaatt-------------tctgagagcattcacctataaaatttctgcaagcaaatctccacctc i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16971080 753 + 48394510 AAACGTTGCTCATATGTTTAGATATTTATTCCTCACTGAGATATTTTTATCATCAATTGACAGAAATATACCAGTGATTGCTCAGTACTATACACTATGCCAGTTTTCAAATAGTCTAATGG---GATAGAGCCTTCATGTCATTAAAGCACAAGTTTAC---AGAAACATAACCACCCCTGGGATTAGAAGATAATTTTAGTAGTC-TTTGGGAATTTCATCCTTAACATTTACGTTGGGGAAAGGGGTTCAAGACACAAAG----------------------------------------------------TCTGCCCCCTACCTTGAGAACAAAGGCTGAGAGTGTTATCCTGTGCACTCTAACGTTTTGCACAAAAACGTGTTACATTGAAACAGATCACTCCAAGCCTGGGACCTAATGGAGTGGGTCTGAGGTATGCCACCCAC-AAGTACCCTTCTTGCCCAACACA--------Tcagcttttgggagtattggctgctaatagctcacagctaagtgtttctcctggcatgtggaaatcatctaacccaatgttatgctctgccctaggg-----gcagtttacatccagtggctgcttaactggcaaggtggaaagatgagagtaagaaaaccaatc--ctttatgttttaatttgggacaaatctgaagagccatataaactccagagcttctttgttgcaatcacaaggcattttcaacctctccctctgcctcatcctgcttctttcaatcctttctaatctaatt-------------tctgagagcattcaccaataaaatttctgcaagcaaatctccaccta i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4468816 753 + 32716333 AAACGTTGCTCATATGTTTAGATATTTATTCCTCACTGAGATATTTTTATCATCAATTGACAGAAATATACCACTAATTGCTCAGTACTATATACTATGCCAGTTTTCGAATAGTCTAATGG---GATACAGCCTTCGTGTCATTAAAGCACAAGTTTAC---AGAAACATAACCGCCCCTGGGATTAGAAGATAATTTTAGCAGTC-TTTGGGAATTTCATCCTTAACATTTATGTTGGGGAAAGGGGTTCAAGACACAAAG----------------------------------------------------TCTGCCCCCTACCTTGAGAACAAAGGCTGAGAGTGTTATCCTGTGCCCTCGAACGTTTTGGACAAAAATGTGTTACATTGAAGCAGATCACTCCAAGCCTGGGATCTAAtggagtgggtctgaggtatgctacccac-aagtacccttcttgaccaatgca--------tcagcttttgggagtattggctgctaatagctcacagctaagtgtatctcctggcatgtggaaaccatctaacccagtgttatgctctgccctagaa-----gcagtttacatccagtgactggttaactggcaaggtggaaagatgagagtaagaaaaccaatc--ctttatgttttaatttgggacaaatctgaagagccatataaactccagagcttctttgttgcaatcacaaggcattttcaaactctccttctgcctcatcctgcttctttcaatcctttctaatctaatt-------------tctgagagcattcaccaataaaatttctgcaagcaaaattccacctc i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168584311 752 - 198365852 AAACATTGCTCACATGTTTAGATATGTATTCCTCACTGAGATATTTTTATCATCAATTGACAGAAATGTACCAGTGATTGCTCAGTACTATGTACTATGCCAGTTTTCAAATAGTCTAATGG---AATAGAGCCTTCAGGTCATTAAAGCACAAGCTTAC---AGAAACATAACTGCCCCTGGGATTAAAAGTTAATTTTAGTAGTC-TTTGGGAGTTGCATCCTTAACATTTAGGTTGGGGAAAGGGGTTCAAGACA-AAAG----------------------------------------------------TCTGCCCCCTACCTTGAGAACAAAGGCTGAAAGTGTTATCCTGTGCACTCTAACGTTTTGCACAAAAGTGTGTTACATTGAAGCAGATCACTCCAAGCCTGGGATCTAAtggagtgggtctgaggtatgccacccac-aagtacccttctcgaccaatgca--------tcagcttttgggagtattggctgctaatagctcgcagttaagtgtttctcctggcatgtggaaaccatctaacccaatgttatgctctgtcccaggg-----gcagtttatatccagtggctggttaactggcaaggtggaaagatgagagtaagaaaaccaatc--ctttatgttctaatttggtacaaatctgaagagacatataaactccagagcttctttattgcaatcacaaggcattttcaaccactccctctgcctcatcctgcttctttcaatcctttctaatcgaatt-------------tctgagagcattcaccaataaaatttctgcaggtaaatctccacctc i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162248196 752 - 192294377 AAACATTGCTCATATGTTTAGATATGTATTCCTCACTGAGATATTTTTATCATCAATTGACAGAAATGTACCAGTGATTGCTCAGTACTATGTACTATGCCAGTTTTCAAATAGTCTAATGG---GATAGAGCCTTCAGGTCATTAAAGCACAAGCTTAC---AGAAACATAACTGCCCCTGGGATTAAAAGATAATTTTAGTAGTC-TTTGGGAGTTGCATCCTTAACATTTAGGTTGGGGAAAGGGGTTCAAGACA-AAAG----------------------------------------------------TCTGCCCCCTACCTTGAGAACAAAGGCTGAGAGTGTTATCCTGTGCACTCTAACGTTTTGCACAAAAGTGTGTTACATTGAAGCAGATCACTCCAAGCCTGGGATCTAAtggagtgggtctgaggtatgccacccac-aagtacccttctcgaccaatgca--------tcagcttttgggagtattggctgctaatagctcgcagttaagtgtttctcctggcatgtggaaaccatctaacccaatgttatgctctgtcccaggg-----gcagtttacttccagtggctggttaactggcaaggtggaaagatgagagtaagaaaaccaatc--ctttatgttctaatttggtacaaatctgaagagacatataaactccagagcttctttattgcaatcacaaggcattttcaaccactccctctgcctcatcctgcttctttcaatcctttctaatcgaatt-------------tctgagagcattcaccaataaaatttctgcaggtaaatctccacctc i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150944146 752 - 180432695 aaacgttgctCATATGTTTAGATATTTATTCCTCACTGAGATATTTTTATCATCAATTGACAGAAATGTACCAGTGATTGCTCAGTACTATGTactatgccagttttcaaatagTCTAATGG---GATAGAGCCTTCAGGTCATTAAAGCACAAGCTTAC---AGAAACATAACTGCCCCTGGGATTAAAAGACAATTTTAGTAGTC-TTTGGGAGTTGCATCCTAAACATTTAGGTTGGGGAAAGGGGTTCAAGACA-AAAG----------------------------------------------------TCTGCCCCCTACCTTGAGAACAAAGACTGAGAGTGTTATCCTGTGCACTCTAACGTTTTGCACAAAAGTGTGTTACATTGAAGCAGATCACTCCAAGCCTGGGATCTAATGGAGTGGGTCTGAGGTATGCCACCCAC-AAGTACCCTTCTCGACCAATGCA--------TCAGCTTTTGGGAGTATTGGCTGCTAATAGCTCGCAGTTAAGTGTTTCTCCTGGCATGTGGAAACCATCTAACCCAATGTTATGCTCTGCCCCAGGG-----GCAGTTTACATCCAGTGACTGGTTAACTGGCAAGGTGGAAAGATGAGAGTAAGAAAACCAATC--CTTTATGTTTTAATTTGGGACAAATCTGAAGAGACATATAAACTCCAGGGCTTCTTCATTGCAATCACAAGGCATTTTCAACCACTCCCTCTGCCTCATCCTGCTTCTTTCAATCCTTTCTAATCGAATT-------------TCTGAGAGCATTCACCAATAAAATTTCTGCAAGTAAATCTCCACCTC i papAnu2.chr3 I 4778 C 0 s chlSab2.chr2 15033444 753 - 90373283 AAGCGTTGCTCATATGTTTAGATATTTATTCCTCACTGAGATATTTTTATCATCAATTGACAGAAATATACCAGTGATTCCTCAGTACTATGTACGATGCCAGTTTTCAAATAGTCTCATGG---GATAGGGCCTTCAGGTCATTAAAGCACTAGCTTAC---AGAAACATAACTGCCCCTGGGATTAGAAGATAATTTTAGTAGTC-TTTGGGAGTGTCATCCTTAACATTTAGGTTGGGGAAGGGGGTTCAAGACACAAAG----------------------------------------------------TCTGCCCCCTACCTTGAGAACAAAGGCTGAGAGTGTTATCCTGTGCACTCTAACGTTTTGCACAAAAGTGTGTTACATTGAGGCAGATCACTCCAAGCCTGGGATCTAACGGAGTCGGTctgaggtatgccgctcac-aagtacccttctcgactaatgca--------tcagcttttgggactatcagctgctaatagctcgcagttaagtgtttctcctggcatgtggaaaccatctaacccaatgttatgctctgccccaggg-----gcagtttacatccagtggctggttaactggcaaggtggaaagatgagagtaagaaaaccaatc--ctttgtgttttaatttgggacaaatctgaagagacatataaactccagagtttcttcgtttcaatcacaaggcactttcaacctctccctctgcctcatcctgcttcattcaatcctttctaatcttatt-------------tctgagagcattcaccaataaaatttctgcaagcaaatctccacctc i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21934517 778 + 50472720 AAACGTTGCAAATATGTTTAAACACTTGTTCTCCACTGAGATATTTTTATCATCAATTGACAGAAATACACCAGTGATTGCTCAGTGCTATTCACTATGCCAGTTTTCAAATAGTCTAATGG---GATAAGGTCTTGAGGTTATTAAAGTACAAGATAGC---AGAAACATAACTGCCTCCAGGAATAGAAGAT-ATTTTAGTAATCTTTTGGGAATTTCATCCTTAAAATTTAGGTTGGGGAAAAGGGTTCAAGACACAAAGTCTGAAACTTAACT---------TTCCAGCTGTTGCC----ATCGGAAGTTTTCTGCCCCCTACCTTGAGAACAAAGGCTGAGAGTTTTATCCTGTGTACTCTAATGTTTTGCACATAAATGTGTTGCATTGAAGCAGATTACCCAGAGCCTGGGATCTAAtggagtgggtctgagttatgccacccac-aagtaccctttttgactaatgca--------tcagcttgtgggagtattggc-----atagctcacagctaagtgtttctccaggcatgtgaaaaccatctaacccaatgtcatgctctgtcctaggg-----gtagttcatatccagtggctggttaactggcagggtggaaagatgagagtaagaaaaccaatc--ccttatgttttaatttgggacaaatctgaaaagccatataaattccagagcttctttgttgcaatcacaaggcatttttcacctctccctctgcctcatcctgcttcttacaatcct---------aatt-------------cctgagatcagtcaccaatgaaatctctgcaagcaaatctccatctc i calJac3.chr21 C 0 C 0 s canFam3.chr31 13835644 772 + 39895921 AAATTTTGCACATATGTTTGAATACTTAG-----------------------------------------------------------CATGAACTATGCCAGCCTTCAAGTACTGTAATGGGAAGAAAGAGCC-TCAGGTCATGACAGTGCGAATTTGCAGAAGAAACATAGCTTCCCCTGTGATTAGAAGACAATTTTAGTAATTGTTAGGGAATTTCACCCTTAACATCCAGGTTGAGGAAAGGGGTGCAAGATGCAAAGTTTAGATCTTAATTAGATGCAAAGTCCAGGTGTTCCCTTCAATAGGAGGT--TCCTGCCCCTACCTTGAGAATAATGGCTGAGAGTGTTGTTCTGGGCACTCTAATGTTTTATGTAGAAGTGTTTTACATAGAAGCTTATCAGTCTATGCCTAGGATCTAATGGAGTAGATctggggtgtgccaaccacaaagcagccttctgagccaaggcactcacactccagcttccaggaatataggcaactaatagctcatagctaaaatcctctcctggaatctgggaaccacctaatccaagatttttcctctccccaggggcagtgcagtctacattcaatgactggttaactgggatgggagaa----gggaataaaaggaccagtctgctccatgccttaattagggacaattctaaagagccatataaattccagaccttctctattgcaattacaagacagtgtcaatctctc---ctgcctgattctattcctttcaatgctttcaaatccacttcagcagtataggatttgagagcattcaccagtaaaattcccatatgcaaatctacatctc i canFam3.chr31 C 0 C 0 e mm10.chr16 78133649 315 + 98207768 I a score=1551054.000000 s hg38.chr21_KI270874v1_alt 96058 418 + 166743 aaattctgtttccaggaaTGGTGACCTAAAGCAgttgaagccaggagtggtcctaagaagcagtatataaaatggtattttagagctg---agtcatctgctgatggctagcagtgaggaccccatcactggtg--ataggtagagcatt---attagctccaggcatattagaacaatgaaattgttaagactttcacctgagatgaatgggatCGGAAAAGAAAGCATTGTCTGGGGACAGAATCTCAAGCATTTGAGAAATTTGGGGAAAATAATAATTATAAAAACTAT---GGAAGAAATGACTGTTGCTGAGGGCTGTCATTTCACTGGAGAAAGACAATGGAAAACTGGAGATAATTAATTACCAATTTAAAGT-AAGTGTGAAAACCACAGGGATTGTTTGGCAGCATATGAAGAATCTCTG s panTro4.chr21 3709681 418 + 32799110 aaattctgtttccaggaaTAGTGACCTAAAGCAgttgaagccaggagtggtcctaagaagcagtatataaaatggtattttagagctg---agtcatctgctgatggctagcagtgaggaccccatcactggtg--ataggtagagcgtt---attagctccaggcatattagaacaatgaaattgttaagactttcacctgagatgaatgggatCGGAAAAGAAAGTATTGTCTGGGGACAGAATCTCAAGCATTTGAGAAATTTGGGGAAAATAATAATTATAAAAACTAT---GGAAGAAATGACTGTTGCTGAGGGCTGTCATTTCACTGGAGAAAGACAATGGAAAACTGGAGATAATTAATTACCAATTTAAAGT-AAGTGTAAAAACCACAGGGATTGTTTGGCAGCATATGAAGAATCTCTG i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16971833 418 + 48394510 aaattctgtttccaggAATAGTGACCTAAAGCAgttgaagccaggagtggtcctaagaagcagtatctaaaatagtattttagagctg---agtcatctgctgatggctagcagtgaggaccccatcactgatg--ataggtagagcgtt---attagctccaggcatattagaaaaatgaaattgttaagactttcacctgagatgaatgggatgggaaaagaaagaattgtctggggatagaatctcaagcatttgagaaatctggggaagacaataactataaaaactat---ggaagaaatgactgttgtagatggctatcatttcactggagaaagacaatggaaaactggagataattaattaccaatttaaagt-aagtgtgaaaaccacagggattgtttggcagcatataaagaatctctG i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4469569 418 + 32716333 aaattctgtttccaggaaTAGTGACCTAAAGCAgttgaagccaggagtggtcctaagaagcagaacctaaaatggtattttagagctg---agtcatctgctgatggctagcagtgaggaccccatcactggtg--ataggtagagcgtt---attagctccaggcatattagaactatgaaattgttaagactttcacctgagatgaatgggatgggaaaagaaagcattgtctggggacagaatctcaagcatttgagaaatttgaggaaaataataattacaaaaactat---ggaagaaattactgttgctgaaggctaccatttcactggagaaagacaatggaaaactggagataattaattaccaatttaaagt-aagtgtgaaaaccacagggattgtttggcagcatataaagaatctctG i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168585063 418 - 198365852 aaattctgtttcTAGGAATAGTGACCTAAAGCAgttgaagccaagagtggtcctaagaagcagaatctaaaatggtattttacagctg---agtcatctgctgatggctagcagtaaggatcccatcactggtg--ataggcagaatgtt---attagctccaggcacattagaacaatgaaatcgttaagactgtcacctgagatgaatcggatgggaaaagaaagcactgtctggggacagaatctccagcatttgagaaatttggggaaaataataattataaaaactat---ggaagaaatgactgttgctgggggctatcatttcgctggagaaaagcaatggaaaactggagataattaattaccagtttaaagt-aagtgtgaaaaccacagggattgtttggcagcatataaagaatctctG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162248948 418 - 192294377 aaattctgtttctaggaatagtgacctaaagcagttgaagccaagagtggtcctaagaagcagaatctaaaatggtattttacagctg---agtcatctgctgatggctagcagtaaggatcccatcactggtg--ataggcagaatgtt---attagctccaggcacattagaacaatgaaatcgttaagactgtcacctgagatgaatcggatgggaaaagaaagcactgtctggggacagaatctccagcatttgagaaatttggggaaaataataattataaaaactat---ggaagaaatgactgttgctgggggctatcatttcgctggagaaaggcaatggaaaactggagataattaattaccagtttaaagt-aagtgtgaaaaccacagggattgtttggcagcatataaagaatctctG i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150944898 418 - 180432695 AAATTCTGTTTCTAGGAATAGTGACCTAAAGCAGTTGAATCCAAGAGTGGTCCTAAGAAGCAGAATCTAAAATGGTATTTTACAGCTG---AGTCATCTGCTGATGGCTAGCAGTAAGGATCCCATCACTGGTG--ACAGGCAGAACGTT---ATTAGCTCCAGGCCCATTAGAACAATGAAATTGTTAAGACTGTCACCTGAGATGAATCAGATGGGAAAAGAAAGCACTGCCTGGGGACAGAATCTCCAGCATTTgagaaatttggggaaaataataattataaaaactat---GGAAGAAATGACTGTTGCTGGGGGCTATCATTTCGCTGGAGAAAGGCAATGGAAAACTGGAGATAATTAATTACCAATTTAAAGT-AAGTGTGAAAACCACAGGGATTGTTTGGCAGCATATAAAGAATCTCGG i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15034197 413 - 90373283 aaattctgtttcTAGGAATAGTGACCTAAAGCAgttgaagccaggagtggtcctaagaagcagaatctaaaatggtattttagagctg---agtcatctgctgatggctagcagtgaggatcccatcactggtg--ataggcagaacgtt---attagctccaggcccattagaacaatgaaattgttaagactgtcacctgagatgaatc-gatgggaaaagaaagcactgtctggggacagaatctcaagcatttgagaaatttggggaaaataataattataaaaactat---ggaagaaatgactgttgctgagggctatcatttcgctggagaaaggcaatggaaaactggaga----taattaccaatttaaagt-aagtgtgaaaaccacagggattgtttggcagcatataaagaatctctG i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21935295 420 + 50472720 aatttctgtttccaggaatagtgacctaaagcagttgaagctaggagtggtcctaagaagcagaatcgaaaacggtattttagagatg---agtcatctgctgatggccagcagtgaggaccccatcactggtg--atagatagagggtt---attagctccgggcacactagaacaatgcaattgataagaccttcacctggactgaatg-gatgggaagggaaagaagcatctggggacagaatctcaagcatttgagatatctgggggatttagtaattataaaaactatgaagaaagaaataattgttgctgagggctatcaattcactagagaaagaaaatggaagaccggagataattaattactaatgtaaggt-aagtgtgaaaactacagggattgctcaacagcatataaagaatctctG i calJac3.chr21 C 0 C 0 s mm10.chr16 78133964 350 + 98207768 agaattTATGCCTAAGTCCGCTAATCTAAGGCAGCTGAACTCTAGGGCTCCTCCAAGAAACAGATGCTAGAACTGGACCTTGGAGTTGGTTAGTCTTCTGTCGATGGTTAGTA-------------------------AGGTGGAGTGCC---ACCAGCCCTTGGTGAATGACATCAGTGCA---------------GCCTGTGCTGGACAAGGTGGGAAGTGAACATTCTGT-----------------------------GTTGGAGAAAAATAGCAATCATAAGGAATAA---GCATGGAATG-CTATTGCTAAAGGCTATCAATTCATTAAAGAAAGACAATAAAAATCTGGAAA----TAGCCACCAACTAAAAGTCAAGTATGAAAGCCACGGATATTCCTTGGCAGTATATAAAGAATATCTG i mm10.chr16 I 315 I 752 s canFam3.chr31 13836416 418 + 39895921 aaagtc-gtttctaggAATATTGACCTAAGGCA---GAAGTcaggagtggtcct-agaaggagattctaaaatgggactttgatgcta---aatcacctgctgatggctagcagtgaggactccatcactggtgatataggtggagtggtaacaacagctccaggcaaactgttgcaatgcaattgttaagactttcacctggggtgaactgaatgggaagagaaaacactggctgcaggcaacat-tcaagcatttgagagatttgggggaagtagtaattatagggactgt---ggaaggaatggctgttgctgagggctatcaattcacctgagaaaaacaatgaaaaactagagataattaatcaccaatttaaggtaaagtgtgaaagccagagggatcccttggcagcacataaagaatctctg i canFam3.chr31 C 0 C 0 a score=59118.000000 s hg38.chr21_KI270874v1_alt 96476 19 + 166743 CCCCAGggtggttggcaag s panTro4.chr21 3710099 19 + 32799110 CCCCAGggtggttggcaag i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16972251 19 + 48394510 CCCCAGgatggttggcaag i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4469987 19 + 32716333 CCCCAGggtggttggcaag i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168585481 19 - 198365852 CTCCAGAgtggttgacaag i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162249366 19 - 192294377 CTCCAGAgtggttgacaag i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150945316 19 - 180432695 CTCCAGAGTGgttggcaag i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15034610 19 - 90373283 CTCCAGAgtggttggcaag i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21935715 19 + 50472720 CTCAAGGGTAGCTGGcaag i calJac3.chr21 C 0 C 0 s canFam3.chr31 13836834 19 + 39895921 ctctactgtagctgaaagg i canFam3.chr31 C 0 I 553 e mm10.chr16 78134314 752 + 98207768 I a score=779304.000000 s hg38.chr21_KI270874v1_alt 96495 272 + 166743 atggccaaatagaaacagctccggtctgcagctcccagtgagatcaacgcagaaggcaggtgacttctgcatttccaactgaggtactcggctcatctcaccgggagtgattagacagtaggtgcagcccacagagggcaag-------acaaagcagggtggggtgtcgcctcacctgggaagcacaaggggtcaaagagctcctttccctagccaagggaagcaatgagagactgtgccataaggaacaacgaattctggcccagaaactatgcttt s panTro4.chr21 3710118 272 + 32799110 atggccaaataggaacagctctggtctgcagctcccagtgagatcaacgcagaaggcaggtgacttctgcatttccaactgaggtactcagctcatctcactgggagtgattagacagtaggtgcagcccacagagggcaag-------acaaagcagggtggggtgtcgcctcacctgggaagcacaaggggtcaaagagctcctttccctagccaagggaagcaatgagagactgtgccataaggaacaacgaattctggcccagaaactatgcttt i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16972270 272 + 48394510 atggccaaataggaacagctccggtctgcagctcccagtgagatcaacgcagaaggcaggtgacttctgcatttccaactgaggtacccggctcatctcactgggagtgattagacagtcggtgcagcccacggagggcaag-------gcaaagcaggatggggtgtcacctcacctgggaagcacaaggggtcaaagagctcctttccctagccaagggaagcaacgagggactgtgccataaggaacaatgaattctggcccagaaactatgcttt i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4470006 272 + 32716333 atggccaaataggaaaagctccagtctgcagctcccagtgagatcaacgcagaaggcaggtgacttctgcatttccaactgaggtacccagttcatctcactgggagtgattagacagtaggtgcagcccacggagggcaag-------acaaagcaggatgggatgtcacctcacctgggaagcacaaggggtcaaggagctcctttccctagccaagggaagcaatgagggactgtgccataaggaacaacaaattctagcccagaaactatgcttt i nomLeu3.chr25 C 0 M 100 s rheMac3.chr3 168585500 258 - 198365852 atggccaaataagaacagctccggtttgcagctcccagtgagatcaacgcagaaggcaggtggcttttgtatttccaactgaggtacctggctcatctcactgggagtgattagacagtcggtgcagcccacggagggcaag-------acaaagtagggtggggtgtc--------------gcacaaggggtcaaagagctccttaccctagccaagggaagcaatgagggactgtgccataaggaaaaacaaattctgggccagaaactgtgcttt i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162249385 272 - 192294377 atggccaaataagaacagctccggtttgcagctcccagtgagatcaacgcagaaggcaggtggcttttgtatttccaactgaggtacctggctcatctcactgggagtgattagacagtcggtgcagcccacggagggcaag-------acaaagtagggtggggtgtcgccttacccaggaagcacaaggggtcaaagagctccttaccctagccaagggaagcaatgagggactgtgccgtaaggaaaaacaaattctgggccagaaactgtgcttt i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150945335 272 - 180432695 atggccaaataagaacagctccagtttgcagctcccagtgagatcaacgcAGAAGGCAGGTGGCTTTtgtatttccaactgagatacctggctcatctcactgggagtGATTAGACAGTcagtgcagcccacggagggcaag-------aCAAAGTAGGGTGGGGTGTCGCCttacccaggaagcacaaggggtcaaaGAGCTCCTtaccctagccaagggaagcaatgagggactgtgccataaggaaaaacaaattccGGGCCAGAAACTGTGCTTT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15034629 272 - 90373283 atggccaagtaagaacagctccggtttgcagctcccagtgagatcaacgcagaaggcaggtggcttttgtatttccaactgaggtacctggctcatctcactgggagtgattagacagtcggtgcagcccacagagggcaag-------acaaagcagggtggggtgtcgcctcacctgggaagcacaaggggtcaaagagctccttaccctagccaagggaagcaatgaaggactgtgccgtaaggaaaaacaaattccgggccagaaactgtgcttt i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21935734 279 + 50472720 atggctgaataggaacagctgcagtctgcaatgcgcagtgtgatcaatgctgaaggtggatgatttctgcatttccaacagaagtatccagctagtctcactgggactggttagacagtgggtgcagcccacagagggcaagcaggagcagggagcagggtggggcatcatctcacctgagaacctcaaggggtcaaggaactccctcccctacccaagggaagccatgagggactgtgccctgaggaaccatgcactctggccgagatactatgattt i calJac3.chr21 C 0 C 0 e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I a score=82559.000000 s hg38.chr21_KI270874v1_alt 96767 37 + 166743 ccccacagtcttcacaacctgcagaccaagagattcc s panTro4.chr21 3710390 37 + 32799110 ccccacagtcttcacaacctgcagaccaagagattcc i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16972542 37 + 48394510 ccctacagtcttcacaacctgcagaccaagagattcc i ponAbe2.chr21 C 0 C 0 s rheMac3.chr3 168585758 37 - 198365852 ccccacggtcttcaccatctgcggaccaagagattcc i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162249657 37 - 192294377 ccccacggtcttcaccatctgcggaccaagagattcc i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150945607 37 - 180432695 CCCCATGGTCTTCACAATCTGCGGACCaagagattcc i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15034901 37 - 90373283 ccccacggtcttcacaatctgcagaccaagagattcc i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21936013 37 + 50472720 tcctacagtcttctcaacccataggccaagagattcc i calJac3.chr21 C 0 I 44 e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e nomLeu3.chr25 4470278 100 + 32716333 M a score=16134.000000 s hg38.chr21_KI270874v1_alt 96804 10 + 166743 ctcaagtggc s panTro4.chr21 3710427 10 + 32799110 ctcaagtggc i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16972579 10 + 48394510 ctcaagtggc i ponAbe2.chr21 C 0 C 0 s rheMac3.chr3 168585795 10 - 198365852 ctcaggtgcc i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162249694 10 - 192294377 ctcaggtgcc i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150945644 10 - 180432695 ctcaggtgcc i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15034938 10 - 90373283 ctcaggtgcc i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21936050 44 + 50472720 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e nomLeu3.chr25 4470278 100 + 32716333 M a score=8863.000000 s hg38.chr21_KI270874v1_alt 96814 4 + 166743 taca s panTro4.chr21 3710437 4 + 32799110 taca i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16972589 4 + 48394510 taca i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4470378 4 + 32716333 tata i nomLeu3.chr25 M 100 C 0 s rheMac3.chr3 168585805 4 - 198365852 taca i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162249704 4 - 192294377 taca i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150945654 4 - 180432695 taca i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15034948 4 - 90373283 tata i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21936050 44 + 50472720 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I a score=386711.000000 s hg38.chr21_KI270874v1_alt 96818 135 + 166743 ccatcagggccctaggtttcaagcacaaaactgggtggccatttaggcaggcactgagctagctgcaggagtttttt----tcataccccagtggcacctggaatgccagtgagacagaaccattcattcccctggaaa s panTro4.chr21 3710441 135 + 32799110 ccatcagggccctaggtttcaagcacaaaactgggcggccatttaggcagacactgagctagctgcaggagtttttt----tcataccccagtggcacctggaatgccagtgagacagaaccattcactcccctggaaa i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16972593 135 + 48394510 ccaccagggccctaggtttcaagcacgaaatggggcggccatttaggcagacactgagctagctgcaggagtttttt----tcataccccagtggcacctggaatgccagtgagacagaaccgttcactcccatggaaa i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4470382 134 + 32716333 ccaccaggg-cctgggtttcaagcacaaaactgggcggccatttaggcagacactgagctagctgcaggagtttttt----tcataccccagtggcacctggaatgccagtgagacagaaccgttcactcccctggaaa i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168585809 134 - 198365852 ccaccagggccctgggtttcaagcacaaaactgggtggccatttagtcagatactgagctagctgcaggagtttttt-----cataccccagtggcacctggaacgccagagagacagaactgttcactcccctggaaa i rheMac3.chr3 C 0 I 6042 s macFas5.chr3 162249708 134 - 192294377 ccaccagggccctgggtttcaagcacaaaactgggtggccatttagtcagatactgagctagctgcaggagtttttt-----cataccccagtggcacctggaacgccagagagacagaactgttcactcccctggaaa i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150945658 135 - 180432695 ccaccagtgccccgggtttcaagcacaaaactgggtggccatttagTCAGAtgctgagctagctgcaggagtttttt----ccataccccagtggcacctggaacgccagagagacagaactgttcactcccctggaaa i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15034952 134 - 90373283 ccaccagtgccctgggtttcaagcacaaaactcggtggccatttagtcagatactgagctagctgcaggagtttttt-----cataccccagtggcacctggaatgccagagagacagaactgttcactcccctggaaa i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21936094 139 + 50472720 ccaccagggccctgggtttcaagcacaaaactgggcggctgtttgggcaaacaccaaactagatgcaggaattatatatatatatatcccaatagcacctgcaatgccagtgagaaagaatcgttcactcccctggaaa i calJac3.chr21 I 44 C 0 e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I a score=307570.000000 s hg38.chr21_KI270874v1_alt 96953 134 + 166743 gagggctgaagccaggaagccaagtggtctagctcagtggatcccacccccatggagcccagcaagctaagatccactggcttgaaatgcttgctgccagcacaacagtttgaagtcaacctgggatgctcgag s panTro4.chr21 3710576 134 + 32799110 gagggctgaagccaggaagtcaagtggtctagctcagtggatcccacccccatggagcccagcaagctaagatccactggcttgaaatgcttgctgccagcacaacagtttgaagtcaacctgggatgctcaag i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16972728 134 + 48394510 gagggctgaagccaggaagccaagtggtctagctcagtggatcccacctccatggagcccagcaagctaagatccactggattgaaatgcttgctgccagcacaacagtttgaagccaacctgggatgctcaag i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4470516 134 + 32716333 gggggctgaagccagaaagccaagtggtctagctcagtggatcccacccccatggaggccagcaagctaagatccactggcttgaaatgcttgctgccagcacagcagtttgaagtcaacctgggatgctcaag i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162249842 134 - 192294377 gaaggatgaaggcagggagccaagtggtctagctcaatggatcccacccccatggagcccagcaagctaagatccactggcttgaaatgcctgctgccagcacaacagtttgaagtcaacctgggatgctcgag i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150945793 134 - 180432695 gaaGGATGAAggcagggagccaagtggtctagctcagtggatcccacccccatggagcccagcaagctaagatccactggcttgaaatgcCTGCTGCCATCACAACAGtttgaagtcaacctgggatgcttgag i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15035086 134 - 90373283 gaaggatgaaggcagggagccaagtggtctagcccagtggatcccacccccatggagcccagcaagctaagatccactggcttgaaatgcctgctgccagcacaacagtttgaagtcaacctgggatgctcaag i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21936233 133 + 50472720 gggggctgaagccagggaacccaatgttatagctcagtggatcccaactgcatggagcccagcaagctaagatgcactggctt-aaattctcactgccagcacagcagtctgaagttgacctgggacatttgag i calJac3.chr21 C 0 I 2256 e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e rheMac3.chr3 168585943 6042 - 198365852 I a score=5246781.000000 s hg38.chr21_KI270874v1_alt 97087 3067 + 166743 cttggtggggtaggggtgtccagcattactgagactcgagaaagctgttttccccttacagtgtaaacaaagctgccaggaagttcagactgggcagagcccatcacagcttggcaaagctgctatagccagccttcctctctagatttctcctctctgggcaaggcatctctgaaagaaaggcaccagcccctgttaggggcttatagataaaactcccatctccttgggacagagcacctgggggaaaagagggctgtggacacaggtttagcagacttaaacatgcctgcctgccagctctgaagagagtggcagatctcctagcatagcgctcgagctctgctaagggacagactgcctcctcaagtgggtctctgacccccatgtctcctgactgggagacacctcctagcaggggtcgacagacatgtcatagaggagagctccggctggcatctggtgggtgcccctctgggaagaagcttccagaggcagcaaaaggcagcaatcttagctgctctgcagcctccactggtgatacccaggcaaacagcgtctggagtggacctccaggaaacagggtctggagtggacctccagcaaactccggcagacctgcagcagaggcacctgttagaaggaaaactaataaa-------------catcaatatcaacaaaaaggatgtccaaacataaatcccatccgaaggtcaccaacatcaaagaccaaaggtagataaatccacgaagatgaggaaaaaccagtgaaaaa-ggctgaaaattccaaaaacc---aggcctcttttcctccaaagcatcacaactcctcaccagcaagggaacaaaactggacaaagaataagtttgatgaattgacagaagtagccttcagaaggtaggtaataacaaacacctccaagct----aaaaaaaaa---aaaaaaaaaaaaaaaaaaa-----------------catgctctaacccaatgcaaggaagctaagaacctt-aaaaaaa-----gaggttagagaaataactaactagaataacaagtttagaaaagaacataaatgacc-----------tgatggagcagaaaaacacagcacaagaacttcatgaatcatacacaactatcaatagctgaatcaatcaagtggaagaaaggatatcagagaaattaaagatca------------------------------------------------------t-----------atataaagtgtgaagacaaaattagagaaaaaagaattaaaaggaacaaataaagcctccaagaaatatgggactatgtgaagagaccaaacctgcatttgattggtgtacctgaaagcgatagggagaatggaaccaagttggaaaacactcttcaggatattatccaggagaacttccccagactagcaagacaggccaacattcaaattcaggaaatacagagaacaccacaaagatactccttgagaaaagcaa-cccaagacacaaaattgtcagattcaccaagattgaaatgaaggaaaaaatattaagggcagccagagagaaaggtcaggttacccacaaagtgaagcccatcagactaacagcagatctctctgcagaaaccttacaagccagaagagagtgagggccaatattcaacattctttaagaaaagatttttcaacccagaatttcatatgcagccaaactaagcttcataggcgaagaagaaataaaatcctttacagacaagcaaatgctgaatgattttgtcaccaccaggtctgccttacaggagctcctgaaggaagcactaaatatggaaaggaaaagccagtacctgcccctgcaaaaacataccaaattgtaaagaccattgacactatgaaaaaaactgcatcaaacaacaggcaaaatagccagctaa---cataatgacaggatcaaattcacacataacaatattaaccttaaatgtaaatgggctaaatgccacagttaaaagacacagactggcaaattggataaagagtcaagacccattggtgtgctgtatttaggagactcatctcatgtgcaaagacacacataggttcaatataagagataaaggaagatttaccaagcaaatggaaagc--aa-aaaaagcacgggttgcaatcctagtctcttataaa--agactttaaaccaacaaagatcaaaaaagataaaaggaatcaatgcaacaagaagagctaactatcctaaatatatacgcacccaatacaggagcacccagattcataaagcaagttcttagagacctacaaagagacttagactgccacacaataatagttggagacttcaacaccccactgtcagtattagacagatcaatgagatagagaattaacaaggatattcaagacttgaactcagctctggaccaagtgggcccgatagacatctacagaactctccacccgaaatcaacagaatatacaatcctctcagcatcacatcacacttattctaaaattgaccacataaatggaagtaaaacattcctcagccaatgcaaaataatggaaaacataacagtctctcagaccacagttcaatcaaattagaactcaggattaagaaactcactcaaaacctcaaaacaacatggaaactgagcaacctgcccctgaatgactactgggttaataacaaaattaaggcagaaataaataagtactttgaaaccaatgagaacataggcaaaacataccagaatctctgggacacagctaaagg--agtgtttagagggaaattcataacactagatacccacaggagaaagtgggaaagatctaaaatcaacaccctaacatcacaattaaaagaactagtgaagcaagagaaaacaaattcaaacctagcagaagacaagaaataactaagatcagagcagaactgaaggagatagagacatgaaaaacacttc-aaaaaatcaatgaatccaggagctgattttttgaaaagattaacaaaatagatatactgttagccagactaacaaagaagaaa-agagagaaagaatcaaatagatgcaataaaaaatgataaagggattattgccactgatcccacagaaatacaaactaccatcagagaatactataaacacct s panTro4.chr21 3710710 2985 + 32799110 cttggtggggtaggggtgtccagcattactgagacttcagaaagctgttttccccttacagtgtaaacaaagctgccaggaagttcagactgggcagagcccatcacagcttggcaaagctgctgtagccagccttcctctctagatttctcctctctgggcaaggcatctctgaaagaaaggcaccagcccctgttaggggcttatagataaaactcccatctccttgggacagagcacctgggggaaaagagggctgtggacacagctttagcagacttaaacattcctgcctgccagctctgaagagagtggcagatctcccagcatagcgctcgagctctgctaagggacagactg-----------------------------------------------ccccctagcaggggtcgacagacatgtcatagaggagagctccggctggcatctggtgggtgcccctctgggaagaagcttccagaggcagcaaaaggcagcaatcttagctgctctgcagcctccactggtgatacccaggcaaacagt---------------------------gtctggagtggacctccagcaaactccagcagacctgcagcagaggcgcctgttagaaggaaaactaacaaa-------------catcaatatcaacaaaaaggatgtccaaacataaatcccatccgaaggtcaccaacatcaaagaccaaaggtagataaatccatgaagatgaggaaaaaccagtgaaaaa-ggctgaaaaatccaaaaacc---aggcctcttttcctccaaaacatcacaactcctcaccagcaagggaacaaaactggacaaagaataagtttgatgaattgacagaagtagccttcagaaggtaggtaataacaaacaccaccaagct----aaaaaaaaa---aaaaaaaaaaaa-------------------------atgctctaacccaatgcaaggaagctaagaacctt-aaaaaaa-----gaggttagagaaataactaactagaataacaagtttagagaagaacataaatgacc-----------tgatggagcggaaaaacacagcacaagaacttcatgaatcatacaaaactatcaatagctgaatcaatcaagtggaagaaaggatatcagagagattaaagatca------------------------------------------------------t-----------atataaagtgtgaagacaaaattagagaaaaaagaattaaaaggaacaaataaagcctccaagaaatatgggactatgtgaagagaccaaacctgcatttgattagtgtacctgaaagcaatagggagaatggaaccaagttggaaaacactcttcaggatattatccaggagaacttccccagactagcaagacaggccaacattcaaattcaggaaatacagagaacaccacaaagatactccttgagaaaagcaa-cccaagacacaaaattgtcagattcaccaagattgaaatgaaggaaaaaatgttaaaggcagccagagagaaaggtcaggttacccacaaagtgaagcccatcagactaacagcagatctctctgcagaaaccttacaagccagaagagagtgagggccaatattcaacattctttaagaaaagaattttcaacccagaatttcatatgcagccaaactaagcttcataggcgaagaagaaataaaatcctttacagacaagcaaatgctgaatgattttgtcaccaccaggtctgccttacaggagctcctgaaggaagcactaaatatggaaaggaaaagccagtacctgcccctgcaaaaacataccaaattgtaaagaccattgacactatgaaaaaaactgcatcaaacaacaggcaaaatagccagctaa---cataatgacaggatcaaattcacacataacaatattaaccttaaatgtaaatgggctaaatgccacagttaaaagacacagacttgcaaactggataaagagtcaagacccattggtgtgctgtatttaggagactcatctcatgtgcaaagacacacataggttcaatataagagataaaggaagatttaccaagcaaatggaaagc--aa-aaaaagcacgggttgcaatcctagtctcttataaa--agactttaaaccaacaaagatcaaaaaagataaaaggaatcaatgcaacaagaagagctaactatcctaaatatatacgcacccaatacaggagcacccagattcataaagcaagttcttagagacctacaaagagacttagactgccacacaataatagttggagacttcaacaccccactgtcagtattagacagatcaatgagacagagaattaacaaggatattcaagacttgaactcagctctggaccaagtgggcccaatagacatctacagaactctccacccgaaatcaacagaatatacaatcctctcagcatcacattgtacttattctaaaattgaccacataaatggaagtaaaacattcctcagccaatgcaaaataatggaaaacataacagtctctcagaccacagttcaatcaaattagaactcaggattaagaaactcactcaaaacctcaaaacaacatggaaactgagcaatctgcccctgaatgactactgggttaataacaaaattaaggcagaaataaataagtactttgaaaccaatgagaacaaaggcaaaacataccagaatctctgggacacagctaaatg--agtgtttagagggaaatttataacactagatacccacaggagaaagtgggaaagatctaaaatcaacaccctaacatcacaattaaaagaactagtgaagcaagagaaaacaaattcaaacctagcagaagacaagaaataactaagatcagagcagaactgaaggagatagagacatgaaaaacacttc-aaaaaatcaatgaatccaggagctgattttttgaaaagattaacaaaatagatatactgttagccagactaataaagaagaaa-agagagaaagaatcaaatagatgcagtaaaaaatgataaagggattatcgccactgatcccacagaaatacaaactaccatcagagaatactataaacacct i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16972862 3063 + 48394510 cttggtggggtaggggcgtccagcattactgaggcttgagaaggctgttttcccctcacattgtaaacaaagctgccaggaagttcagactgggtggagcccatcacagcttggcaaagctgctatagccagcctgcctctctagattcctcctctctgggcaaggcatctctgaaagaaagacaccagcccctgttaggagcttatagataaaactcccatctccttgagacagagcacctgggggaaaagagggctgtggacacagctttagcagacttaaatgttcctgcttgccagctctgaagagaatggcagatctcctagcacagcactcgagctctgctaaggtacaggctgcctcctcaagtgggtccctgacccccgtgtctcctgactgggagacacctcctaacaggggtcgacagacatgctgtagaggagagctctggctggcatctggtgggtgcctctctgagaagaagcttccagaggcaggaaaaggcagcaatctttgctgctctgcagcctccactggtgatacccaggcaaacagc---------------------------gtctggagtggacctccagcaaattccagcagacctgcagcagaggcacctgttaaaaggaaaactaacaaacaaaa--gaatagcatcaatatcaacaaaaaggatgtccaaacataaatcccatccgaaggtcaccaacatcaaagaccaaaggtagataaatccatgaagatgaggaaaaaccagtgaaaaa-ggctgaaaattccaaaaaccagaaggcctcttttcctccaaagcatcacaactcctcaccagcaaaggaacaaaactggacaaagaataagtttgatgaattgacagaagtagccttcagaaggtaggtaataacaaactcctccaagct----aaaaaaaaa---aaaaaaaaaaag------------------------catgctctaa-ccaatacaaggaagctaagaaccctaaaaaaaa-----gaggttagagaaataactaacaagagtaaccagtttagagaagaacataaatgacc-----------tgatggagtggaaatacacagcacaagaacttcatgaatcatacacaactatcaatagctgaatcaatcaagtggaagaaaggatatcagagagattaaagatca------------------------------------------------------tatatatatatgatataaagtgtgaagacaaaatgagagaaaaaagaattaaaaggaatgaataaatcctccaagagatatgggactatgtgaagagaccaaacctacatttgattggtgtacctgaaagtgacaggcagaatggaaccaagttggaaaacactcttcaggatattatccagcagaacttccccagactagcaagacaggccaacattcaaattcaggaaatacagagaacaccacaaagatactccttgagaaaagcaa-cccaagacacataattgtcagattcaccaagattgaaatgaaggaaaaaatgttaagggcagccagagagaaaggtcaggttacccacaaagtgaagcccatcagactaacagcagatctctctgcagaaaccttacaagccagaagacagtgagggccaatatttaacattcttaaagaaaagaattttcaacccagaatttcatatccagccaaattaagcttcataggtgaagaagaaataaaatcctttacagacaagcaaatgctgaaagattttgtcaccaccaggtttgcattacaggagctcctgaaggaagcactaaatatggaaaggaaaagccagtacctgccactgcaaaaacataccaaactgtaaagaccattgacactatgaaaaaaactgcatcaattaacagtcaaaatagccagctagcatcataatgacaggatcaaatccacacataacaatattaaccttaaatataaacaggctgaatgccccaactaaaagacacagattggcaaattggataaagagtcaagacccattggtgtgctgtatttaggagactcatctcatgtgcaaagacacacgtaggttcaatataagagataaaggaagatttaccaagcaaatggaaaacaaaa-aaaaagcacaggttgcaatcctagtctcttataaa--agactttaaaccaacaaagatcaaaaaagataaaaggaatcaatgcaacaagaagagctaactatcctaaatatatacgcacccaatacaggagcacccagattcataaagcaagttcttagagacctacaaagagacttagactcccacacaataatagttggagactttaacaccccactgttagtattagacagatcaatgagacagaaaattaacaaggatattcaagacttgaactcagctctggaccaagcgggcccaatagacatctacagaactctccacctgaaatcaacagaatatacaatcctctcagcaccacatcacacgtattctaaaattgaccacacaaatggaagtaaaacatttctcagtcaatgcaaaagaatggaaaacataacagtctctcagaccacagttcaatcaaattagaactcaggattaagaaactcactcaaaaccacaaaacaacatggaaactgagcaatctgcccctgaatgactactgggtaaataacaaaattaaggcagaaataaataagtactttgaaaccaatgagaacaaaggcaaaacataccggaatctctgggacacagctaaagg--agtgtttagagggaaatttataacactaaatgcccacaggagaaagtgggaaagatctaaaatcaacaccctaacatcacaattaaaagaactagtgaagcaagagaaaacaaattcaaacctagcagaagacaagaaataactaagatcagagcagaactgaaggagatagagacatgaaaaacacttc-aaaaaatcaatgaatccaggagctggttttttgaaaagattaacaaaatagctaaactgttagccagactaacaaagaagaaa-agagagaaagaatcaagtagatgcaataaaaaatgataaagggattatcgccactgatcccacagaaatacaaactaccatcagagaatactataaacacct i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4470650 3066 + 32716333 cttggtggggtaggggcatccagcattactgaggtttgagaa-gctgttttcccctcacagtctaaacaaagatgccaggaagttcagcctgggtggagtccatcacagcttggcgaagctgctatagccagcctgcctctctagattcctcctctctgggcaaggcatttctgaaagaaaggcaccagcccctgttaggggcttatagataaaactcccatctccttgggacagagcacctgggggaaaagagggctgtggacacagctttagcagacttcaacattcctgcctgccagctctgaagagaatggcagatctcctagcatagcacttgagctctgctaagggacagactgcctcctcaagtgggtc----------------cctgactgggagacacctcctagcagatgttga-agacatgtcgtagaggagagctccagctggcatctggtgggtgcccctctgggaagaagcttccagaggcaggaaaaggcagcaatctttgctgctctgcagcctccactggtgatacccaggcaaacagg---------------------------gtctggagtggacctccagcaaactccagcagacctgcagcagaggcgcctgttagaaggaaaactaacaaacagaaatgaatagcagcaatatcaacaaaaaggatgtccaaacataaatcccataggaaggtcaccaacatcaaagaccaaaggtagataaatccatgaagatgaggaaaaaccagcaaaaaa-ggctgaaaattccaaaaaccagaaggcctcttttcccccaaagcatcacaactcctcaccagcaaaggaacaaaactggacaaagaataagcttgaagaattgacagaagtagccttcagaaggtaggtaataacaaactcctccaaggt----taaaaaaaa---aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagcatgctctaacccaatgcaaggaagctaagaactt--aaaaaaa-----gaggttagagaaataactaactagaataaccagtttagagaagaacataaatgacc-----------tgatggagcagaaaaacacagcacaagaacttcatgaatcatacagaactatcaatagctgaatcaatcaagtggaagaaaggatatcagagagattaaagatca------------------------------------------------------tatatgtatatgatataaagcgtgaagacaaaattagagaaaaaagaattaaaaggaacgaataaagcctccaagaaatatgggactatgtgaagagaccaaacctacatttgattggtgtacctgaaagtgacagggagaatggaaccaagttggaaaacactcttcaggatattatccaggagaacttccccagactagtgagacaggccaatattcaaattcaggaaatacagagaacaccacaaagatactccttgagaaaagcaa-cccaagacacataattgtcagattcaccaagattgaaatgaaggaaaaaatgttaagggcagccagagagaaagatcaggttacccacaaagtgaagcccatcagactaacagcagacctctctgcagaaaccttacaagccagaagagagtgagggccaatattcaacattcttaaagaaaagaattttcaacccaaaatttcatatccagccaaactaagcttcataagtgaaggagaaataaaatcctttacagacaagcaaatgctgaaagattttgtcaccaccaggtctgccttacagaagctcctgaaggaaccactaaatatggaaaggaaaagccagtacctgccactgcaaaaacataccaaattgtaaagaccattgacactatg-aaaaaactgcatcaattaatgggcaaaataaccagctagcatcataatgacaggaccaaattcacacataacaatattcaccttaaatgtaaatgggctgaatgccccaactaaaagacacagactggcaaattggataaagagtcaagacccattgttgtgctgtatttaggagactcatctcatgtgcaaagacaaacataggttcaatataagagataaaggaagatttaccaagcaaatggaaagc-aaa-aaaaagcacaggttacaatcctagtctcttataaa--agactttaaaccaacaaagatcaaaaaagacaaaaggaatcaatgcaacaagaagagctaactaacctaaatatatacgcacccaatacaggagcacccagattcagaaagcaagtttttagaggcctacaaagagacttagactcccacacaataatagttggagactttaacaccccactgtcagtattagacagattaatgagacagaaaattaacaaggatattcaagacttgaactcagctctggaccaagcaggcccaatggacatctacagaactctccacccaaaatcaacagaatatacaatcctctcatcaccacatcgcatttattctaaaattgactgcataaatggaagtaaaacattcctcagccaatgcaaaaaaatggaaaacataacagtctctcataccacagttcaatcaaattagaactcaggattaagaaactcactcaaaaccacaaaacaacatggaaactgagcaacctgcccctgaatgactactgggtaaataacaaaattaaggcagaaataaataagtactttgaaaccaatgagaacaaaggcaaaacataccagaatctctgggacacagctaaagg--agtgtttagagggaaacttataacactaaatgcccacaggagaaagtgggaaagatctaaaatcaacaccctaacatcacaattaaaagaactagtgaagcaagagaaaacaaattcaagcctagcagaaggcaagaaataactaagatcagagcagaactgaaggagatagagacatgaaaaactattc-aaaaaatcaatgaattcaggagctggttttttgaaaagattaacaaaatagatagatcactagccagactaataaagaagaaa-agggag-aagaataaaat-gacaaaataaaaaatgataaaggggatatcaccactgatcctacagaaatacaaactaccatcagataatactatgaacacct i nomLeu3.chr25 C 0 I 23 s macFas5.chr3 162249976 3058 - 192294377 cttggcggggtaggggcatccagcattactgaggtttgagaaggccatttgcccctcacagtgtaaacaaagctgccaggaaattcagactgggcagagcccatcacagctcggtaaagctgctatcgtcagcctgcctctctagattcctcctctctgggcaaggcatctctgaaagaaaggcaccagcccctcttaggggcttatagataaaactcccatctccttgtgacagagcacctgggggaaaagagggctgtggacacagctttaggagacttaaac-ttcctgcctgccagctctgaagagagtagcagatctcctagcacagcgcttgagctctgctaagggactgactg---cctcaag----------------------------------acacctcccaacaggggtcggcagacacctcatagaggagagctctggctggcatgtggtggatacccctctaggaagaagcttccagagacaggaaaaggcagcaatctttgctgttctgcaacctccactggtgatacccaggcaaacagg---------------------------gtctggagtggacctccagcaaactccagcaaacctgcagccgaggcgcctgttagaacaaaaactaacaaacagaaaggaatagcatcaatatcaacaaaaaggatgtccaaacataaagcccatttgaaggtcaccaacatcaaagaccaaaggtagataaatccatgaagatgaggaaaaaccagtgcaaaatggctgaaaattccaaaaaccagaaggcctcttttcctccaaagcatcacaactgctccccagcaagggaacaaaactggacaaagaataagtttgatgaattgacagaagtagccttcagaaggtgggtaataacaaattcctccaagctaaaaaaaaaaaaaaaaaaaaaaaaaaag------------------------tgcattctaacccaatgcaaggaagctaagaacctt-aaaaaaa--------gttagaggaattgctaactagaataaccagtttagagaagaacataaatgacctgatgatgacaagatggagctgaaaaacacagcacaagaacttcatgaagcgtacacaactatcaataactgaatcaatcaagtggaagaaaggatatcagagagattaaagatcaact-------------------------tttatatatc----------------tatatatatacaatataaagtgtgaagacaaaattagaggaaaaagaatacaaaggaacg-ataaagcctccaagaaatatgggactatgtgaagaagccaaacctacatttgattggtgtacctgaaagtgatgtggagaatcgaaccaagttggaaaacactcttcaggatattatccaggagaacttccccagcctagcaagacaggccaacattcaaattcgggaaatacagagaacatcacaaagatactccttgagaaaagcaaccccaagacacataattgtcagattcaccaaggttgaaatgagcgaaaaaatgttaagggcagccagagagaaaagtcgggttatccacaaagtgaagcccatcagactaacagcaaatatctctgcagaaaccctacaagccagaagagagtgagaaccaatattaaacattcttaaagaaaaaaattttcaacccagaatttcatatccagccaaactacacttcataagtgaagaagaaataaaatcctttacagacaagcaaatgctgaaagattttgtcaccaccaggtctgccttacaggagctcctgaaggaagcactaaatatggaaaggaaaagccagtacctgccagtgcaaaaacataccaaattgtaaagaccatcaacactatg-aaaaaactgcatcaattaacagaaaaaatagccagctagcatcataatgtcaggatcaaattcacacataacaatattaaccttaaatgtaaatgggctgaatgccccaactaaaagacacagactggcaaattggataaagagtcaagacccattggtgtgttgtatttaggagactcatctcatgtgcaaagacacgcataggttcaatataagagatacaggaatatttaccaagcaaatggaaagaaaaa-aaaaagcacaggttgcaaccctagtctcttataaaacagactttaaaccaacaaagatcaaaaaagacaaaaggaatcaatgcaacaagaagagctaactatcctaaatatatatgcacccaatacaggagcacccagattcataaagcaagttcttagagacctaaaaagagacttagactcccacacaataatagttggagactttaacaccccattgtcagtattagacagatcaatgagacagaaaattaacaaggatattcaggactggaactcagctctggaccaagcaggcctgatagacatctacagaactctccacctgaaatcaacagaatatacattcttctcagcaccacatcgcacttactctaaaattgaccacataaatggaagtaaaacactcctcagcaaatgcaaaagaatggaaaacataacagtctctcagaccacagtgcaatcaaattagaactcaggattaagaaactcactcaaaaccacaaaacaatgtggaaactgagcaacctgcccctgaatgactactgggtaaataaagaaattagggcagaaataaatgagttatttgaaaccaatgagaaaaaagacacaacataccagagtctctgggacacagctaaagc--agtgtttagagggaaatttatagcactaaatgcccacaggagaaagtgggaaacatctagaattgacaccctaacatcacaattaaaagaactagtgaagcaagagaaaacaaattcaaacctagcagaagacaagaaattactaagatcagagcagaattgaaggagacagagacacaaaaaacacttcaaaaaaatcaatgaatccaggagctggttttttgaaaacattaacaaaacagatagactgttagccagactaataaagaaaaaa-agagagaaagaatcaaatagacgcaatacaaaataataaagggaatatcaccactgaacccacagaaatacaaactaccatcagagaatactataaacacct i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150945927 3091 - 180432695 cttggcTGGGTAGGGGCGTCCAGCATTACTGAGGTTTGAGAAGGCCGTTtgcccctcacagtgtaaacaaagctgccaggaaatTCAGACTGGGCAGAGCCAATcacagctcagcaaagctgcTATCGCCAgcctgcctctctagattcctcctctatgggcaaggcatctctgaaagaTAGGCACCAGCCCCTGttaggggcttatagataaaactcccatctccttgTGACAGAGCACCTGGAGGAAAAGAGGGCTGTGGACACAGCTTTAGGAGACTTAAac-ttcctgcctgccagctctgaagagagtgGCAGATCTCCTAGCATagcactcgagctctgctaagggactgactg---cctcaagtgagtccctgacccctgtgcctcctgactgggacacacctcccagcaggggtggGCAGGCACCTCATAGAGTAGAGCTCCAGCTgacatctggtgggtgcccctctagGAAGAAGCTTCCAGAGACAGGAaaaggcagcaatctttgctgttctgcaacctccactggtgatacccaggcaaacagg---------------------------gtctggagtggacctccagcaagcttcagcagacctgcagcagaggtgcctgttagaaaaaaaactaacaaacagaaaggaatagcatcaatatcaacaaaaaggatgtccaaaCATAAAGCCCATCCgaaagtcaccaacatcaaagaccaaaggtagataaatccatgaagatgaggaaaaatcagcgcaaaatggctgaaaatttcaaaaaccagaagGCCTCTTTTCCTCTAAAGCATCACAACTGTTccccagcaagggaacaaaactggacaaagaataagtttgatgaattgacagaagtagccttcagaaggtaggtaataacaaattcctccaagct----aaaaaaaaaattaaaaaaaaaaag------------------------cacgttctaacccaatgcaaggaagctaagaacctt-aaaaaaaaaaaaaaggttagagaaataactaactagaataaccagtttagagaagatcATAAATGAcc-----------agatggagctgaaaaacacagcacaagaacttcatgaagcatatacaactatcaatagctgaatcaatcaagtggaagaaaggatatcagagagattaaagatcaactt-----------atttatttatttatttatttatt----------------tatttatttatgatataaagtgtgaagaaaaaattagagaaaacagaATACAAAGGAATg-ctaaagcctccaagaaatatgggactatgtgaagaggccaaacctacatttgattggtgtgcctgaaagtgatgtggagaatggaaccaagttggaaaacactcttcaggatattatccaggagaacttccccagcctagcaagacaggccaacattcaaattcgggaaatacagagaatgccacaaagatactccttgagaaaagcaaccccaagacacataattgtcagattcatcaaggttgaaatgaggGAATAAAtgtcaagggcagccagagagaaaagtcgagttacccacaaagtgaagcccatcacactaacagcaaatatctctgcagaaaccctacaagccagaagagagtgagagccaata------------aaagaaaaaaattttcaacccagaatttcatatccagccaaactacacttcataagtgaagaagaaataaaatcctttacagacaagcaaatgctgaaagattttgtcaccaccaggtctgccttacaggagctcctgaaggaagcactaaatatggaaaggaaaagccagtacctgccactgcaaaaacataccaaattgtaaagaccatcaacactatg-aaaaaactgcatcaattaacagaaaaaatagCCAGTTAGCATCATAATGTCAGgatcgaattcacacataacaatattaaccttaaatgtaaatgggctgaatGCCCCAACTAaaggacacagactggcaaattgggtaaagagtcaagacccattggtgtgttGTATTTAGGAGACTCgactcatgtgcaaagacacacataggttcaataTAAGAGATacaggaatatttaccaagcaaatggaaagaaaaacaaaaagcacaggttgcaatcctagtctcttataaaacagactttaaaccaacaaagatcaaaaaagacaaaaggaatcaatgcaacaggaagagctaactatcctaaatatatatgcacccaatacaggagcacccagattcataaagcaagttcttagagacctaaaaagagacttagactcccacacaataatagttggagactttaacaccccactgtcagtattagacagatcaatgagacagaaaattgacaaggatattcaggactggaactcagctctggaccaagcaggcctgatagacatctacagaactctccacctgaaatcaacagaatatagattcttctcagcaccacatcgcacttactctaaaattgaccacataaatggaagtaaaacactcctcagcaaatgcaaaagaatggaaaacataacagtctctcagaccacagtgcaatcaaattagaactcaggattaagaaactcactcaaaaccgcaaaACAAcgtggaaactgagcaacctgcccctgaatgactactgggtaaataaagaaattagggcagaaataaatgagttatttgaaaccaatgagaacaaagacaaaacataccagagtctctgggacacagctaaagcagagtgtttagagggaaatttatagcactaaatgcccacaggagaaagtgggaaacaTCTagaattgacaccctaacatcacaattaaaagaactagtgaagcaagagaaaacaaattcaaacctagcagaagacaagaaataactaagatcagagcagaattgaaggagacagagacacaaaaaacacttcaaaaaaatcaatgaatccagcagctggttttttgaaaacattaacaaaacagatagactgttagccagactaataaaaaaaaaagagagagaaagaatcaaatagacgcaatacaaaataataaagggaatatcaccactgaacccacagaaatacaaactaccatcagagaatactataaacacct i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15035220 3085 - 90373283 cttggcggggtaggggtgtccagcattactgaggtttgagaaggccatttgccccttacagtataaacaaagctgccaggaaattcagactgggcagagcccatcacagctcggtaaagctgctatcgccagcctgcctctctagattccacctctctgggcaaggcatctccgaaagataggcaccagcccctgttaggggcttatagataaaactcccatctccttgtgacagagcacctgggggaaaagagggctgtggacacagctttaggagacttaaac-ttcccgcctgccagctctgaagagagtagcagatctcctagcacagcgcttgagctctgctaagggactgactg---cctcaag----------------------------------acacctcccagcaggggtcggcagacacctcatagaggagagctccggctggcatctggtggatgcccctctaggaagaagcttccagagacaggaaaaggcagcaatctttgctgttctgcaacctccactggtgatacccaggcaaacagt---------------------------gtctggagtggacctccagcaagctccagcagacctgcagcagaggcgcctgttagaacaaaaacta--aaacagaaaggaatagcatcaatatcaacaaaaagtatgtccaaacataaagcccatctgaaggtcaccaacatcaaagaccaaaggtagataaatccatgaagatgaggaaaaaccagcgcaaaatggctgaaaattccaaaaaccagaaggcctcttttcctccaaagcatcacaactgctccccagcaagggaacaaaactggacaaagaataagtttgatgaattgacagaagtagccttcagaaggtgagtaataacaaattcctccaagct----aaaaaa------aaaaaaaaaaag------------------------tgcgttctaacccaatgcaaggaagctaagaacctt-taaaaaaaaaaaaaggttagagaaataactaactagaataaccagtttagagaagatcataaatgaca-----------agatggagctgaaaaacacagcacaagaatttcatgaagcatacacaactatcaataactgaatcaatcaagtggaagaaaggatatcaaaaagattaaagatcaacttttatatatgtattttatatatatatatatatattatatatgtattttatatatatatatatgatataaagtgtgaagacaaaattagaggaaaaagaatacaaaggaatg-ataaagcctccaagaaatatgggactatgtgaagaagccaaacctacatttgattggtgtacctgaaagtgatgtggagaatcgaaccaagttggaaaacactcttcaggatattttccaggagaacttccccagcctagcaagacaggccaacattcaaattcgggaaatacagagaacaccacaaagatattccttgagaaaagcaaccccaagacacataattgtcagattcaccaaggttgaaatgagcgaaaaaatgttaagggcagccagagagaaaagtcgggttatccacaaagtgaagcccatcagactaacagcaaatatctctgcagaaaccctacaagccagaagagagtgagagccaatattaaacattcttaaagaaaaaaattttcaacccagaatttcatatccagccaaactacgcttcataagtgaagaagaaataaaatcctttacagacaagcaaatgctgaaagattttgtcaccaccaggtctgccttacaggagctcctgaaggaagcactaaatatggaaaggaaaagccagtacctgccactgcaaaaacataccaaattgtaaagaccatcaacactatg-aaaaaactgcatcaattaacagaaaaaatagccagctagcatcataatgtcaggatcaaattcacacataacaatattaaccttaaatgtaaatgggctgaatgccccaactaaaagacacagactggcaaattggataaagagtcaagacccattggtgtgttgtatttaggagacttatctcatgtgcaaagacacgcataggttcaatataagagatacaggaagatttaccaagcaaatggaaagaaaaacaaaaagcacaggttgcaatcctagtctcttataaaacagactttaaaccaacaaagatcaaaaaagacaaaaggaatcaatgcaacaagaagagctaactatcctaaatatatatgcacccaatacaggagcacccagattcataaagcaagttcttagagacctaaaaagagacttagactcccacacaataatagttggagactttaacaccccactgtcagtattagacagatcaatgagacagaaaattaacaaggatattcaggactggaactcagctctggaccaagcaggcctgatagacatctacagaactctccacctgaaatcaacagaatatacattcttctcagcaccacatcgcacttactctaaaattgaccacataaatggaagtaaaacactcctcagcaaatgcaaaagaatggaaaacataacagtctctcagaccacagtgcaatcaaattagaactcaggattaagaaactcactcaaaaccacaaaacaacgtggaaactgagcaacctgcccctgaatgactactgggtaaataaagaaattagggcagaaataaatgagttatttgaaaccaatgagaataaagacaaaacataccagagtctctgggacacagctaaagc--agtgtttagagggaaatttatagcactaaatgcccacaggagaaagtgggaaacatctagaattgacaccctaacatcacaattaaaagaactagtgaagcaagagaaaacaaattcaaacctagcagaagacaagaaataactaagatcagagcagaattgaaggagacagagacacaaaaaacacttcaaaaaaatcaatgaattcaggagctggttttttgaaaacattaacaaaacagataaactgttagccagactaataaagaaaaaa-agagagcaagaatcaaatagacgcaatacaaaataataaagggaatatcaccactgaacccacagaaatacaaactaccatcagagaatactataaacatct i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21936366 2256 + 50472720 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e rheMac3.chr3 168585943 6042 - 198365852 I a score=1165.000000 s hg38.chr21_KI270874v1_alt 100154 6 + 166743 gtacac s panTro4.chr21 3713695 6 + 32799110 gtacac i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16975925 6 + 48394510 gtacgc i ponAbe2.chr21 C 0 I 17 s macFas5.chr3 162253034 6 - 192294377 ctatgc i macFas5.chr3 C 0 I 17 s papAnu2.chr3 150949018 3 - 180432695 cta--- i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15038305 6 - 90373283 ctatgc i chlSab2.chr2 C 0 I 17 e calJac3.chr21 21936366 2256 + 50472720 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e rheMac3.chr3 168585943 6042 - 198365852 I e nomLeu3.chr25 4473716 23 + 32716333 I a score=1332.000000 s hg38.chr21_KI270874v1_alt 100160 10 + 166743 tttatttgca s panTro4.chr21 3713701 10 + 32799110 tttatttgca i panTro4.chr21 C 0 C 0 s papAnu2.chr3 150949021 4 - 180432695 ------tgca i papAnu2.chr3 C 0 I 16 e calJac3.chr21 21936366 2256 + 50472720 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e rheMac3.chr3 168585943 6042 - 198365852 I e ponAbe2.chr21 16975931 17 + 48394510 I e chlSab2.chr2 15038311 17 - 90373283 I e macFas5.chr3 162253040 17 - 192294377 I e nomLeu3.chr25 4473716 23 + 32716333 I a score=2778988.000000 s hg38.chr21_KI270874v1_alt 100170 1585 + 166743 tagaagaaattgataaattcctggacatatacaccctgcctagactaaaccaagaagaagtcaaatccctgaatagaccaataacaagttctgagattgaggcagtaattaatagcctaccaaccaaaaaaaaaa-----------gcccgggaccagatgaattcacagccagattccacgagaggtacaaagaggagctggtaccattccttctgaaactattccaaaccaaagaaaaa---ggattcctctttaactctttttacgaggccaggatcatcctgatatcgaaacctgccatagacacaccaaaaaaaggaagtttcaggccaatatccctgatgaacatcaatgcaaatatcctcaataaaatactgacaaaccgaatccagcagcacgtcaaaaagtttatccaccacgatcaagtcagctccatccctgagatgcaaggctggtccaccatacacaaatcaataaacataatccatcatataaacagaaccaataatgaaaaccacatgattatctcaacagatgcagaaaaggccttcaacaaaattcaacaccccttcaagctaaaaactctcaataaactaggtatcaatggaatgtatctcaaaataataagagctatttatgacaaacccacagccaataacatactaaatgggcaaaatttggaagcattccctttcaaaaccagcacaaggcaagtatgccctctctcaccattcctactcaacatagtattggaagtgctggccagggcaatcaaggaagagaaagaaataaagcttattcaattaggaaaagaggaagtcaaattgtctctgtttgcagatgacatgatcgtatatttagaaaaccccatcgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtccaaaaatcacaagcatccctatacaccaatagtagaaaaacagagagccaaatcatgagtgaattcccactcacaattgctactaagagaataaaatacctaagaatacaacttacaagggatgtgaagtatctgttcaaggagaactgcaaacctctactcaaggaaataagagaggacacaaacaaatgaaaaaatattttatactcatggataggaagacttaatatcttgaaaatggctgtactgcccaaaacaatttatagattcaatactgtccccatcaagctaccactgactttctttacagaattagaaaaaaaactactttaaatttcatatagaaccaaaaaagagcctgtatagccaagacaatcctaagcaaaagaaaacaaaggtggagccatcatggtacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactgttaccaaaacagatatatagactgatggaacagaacagagccctcaggaataatgccacacatctacaaccatcagatctttgataaccctgacaaaaataagcaatggggaaaggatcccctatttaataaatggcattgggaaaactggctagccatatacaggaaactgaaactggacctcttcct s panTro4.chr21 3713711 1583 + 32799110 tagaagaaattgataaattcctggacatatacaccctcccaagactaaaccaggaagaagtcaaatccctgaatagaccaataacaagttctgagattgaggcagtaattaatagcctaccaaccaaaaaaaaaa------------cccgggaccagatgaattcacagccagattctacgagaggtacaaagaggagctggtaccattccttctgaaactattccaaaccaaagaaaaa---ggattcctctttaactctttttacgaggccaggatcatcctgatatcaaaacctgccatagacacaccaaaaaaaggaagtttcaggccaatatccctgatgaacatcaatgcaaatatcctcaataaaatactgacaaacagaatccagcagcacatcaaaaagtttatccaccacgatcaagtcagctccatccctgagatgcaaggctggtccaccatacacaaatcaataaacgtaatccatcatataaacagaaccaataatgaaaaccacatgattatctcaacagatgcagaaaaggccttcaacaaaattcagcaccccttcaagctaaaaactctcaataaactaggtatcaatggaatgtatctcaaaataataagagctatttatgacaaacccacagccaataacatactaaatgggcaaaatttggaagcattccctttcaaaaccagcacaaggcaagtatgccctctctcaccattcctactcaacatagtattggaagtgctggccagggcaatcaaggaagagaaagaaataaagcgtattcaattaggaaaagaggaagtcaaattgtctctgtttgcagatgacatgatcgtatatttagaaaaccccatcgtctcagcccaaaatctccttaagctgataagcaatttcagcaaagtctcaggatacaaaatcaatgtccaaaaatcacaagcatccctatacaccaatagtagaaaaacagagagccaaatcatgagtgaattcccactcacaattgctactacgagaataaaatacctaagaatacaacttacaagggatgtgaagtatctgttcaaggagaactgcaaacctctactcaaggaaataagagaggacacaaacaaatgaaaaaatattttatactcatggataggaagacttaatatcttgaaaatggctgtactgcccaaaacaatttatagattcaatactatccccatcaagctaccactgactttctttacagaattat-aaaaaaactactttaaatttcatatagaaccaaaaaagagcctgtatagccaagacaatcctaagcaaaagaaaacaaaggtggagccatcatggtacctgacttcaaactatactacaaggatacagtaaccaaaacagcatggtactgttaccaaaacagatatatagactgatggaacagaacagagccctcaggaataatgccacacatctacaaccatcagatctttgataaccctgacaaaaataagcaatggggaaaggatcccctatttaataaatggcattgggaaaactggctagccatatacaggaaactgaaactggacctcttcct i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16975948 1595 + 48394510 tagaagacagtgataaattcctggacatatacaccctcccaagactaaaccaggaagaagtcaaatccctgaatagactaataacaagttctgagattgaggcagtaattaatagcctaccaaccaaaaaaaaaaaaaaaaaaaaagcccgggaccagatggattcacagccagattccacgagaggtacaaagaggagctggtaccattccttctgaaactgttccaaaccaaagaaaaa---ggaatcctctttaactctttttatgaggccagcatcatcctgatatcgaaacctgccatagacacaccaaaaaaaggaagtttcaggccaatatccctgatgaacatcaatgcaaaaatcctcgataaaatactgacaaaccgaatccagcagcacatcaaaaagtttatccaacacgatcaagtcagctccatccctgagatgcaaggctggtccaccatacacaaatcaataaacgtaatccatcacataaacagaaccaataatgaaaaccacatgattatctcaatagatgcagaaaaggcctttgataaaattcaacacctgttcaggctaaaaactgtcaataaactaggtatcaatggaatgtatccaaaaataataagagctatttatgacaaacccacagtcaatgacatactaaatgggcaaaatttggaagcattccctttcaaaaccagcacaaggcaagtatgccctctctcaccattcctactcaacatagtattggaagtgctggccagggcaatcaagcaagagaaagaaataacgggtattcagttaggaaaagaggaagtcaaattgtctctgtttgcagatgacatgattgtatatttagaaaaccccattgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtccaaaaatcacaagcatccctatacaccaatagtagaaaaacagagagccaaatcataagtgaactcccactcacaattgctactaagagaataaaatacctaagaatacaacttacaagggatgtgaaggatctgttcaaggagaactaaaaacctctgctcaaggaaataagagaggacacaaacaattgaaaaaacattttatactcatgaataggaagaatcactatattgaaaatggccatactgcccaaagcaatttacagattcaatactatccccatcaagctaccactgactttctttacagaattgg-aaaaaaactactttaaatttcatatagaaccaaaaaacaggctgtatagccaagacaatcctaagcaaaagaaaacaaaggtacagccatcatggtacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggcactggtaccaaagcagatatatagactgatggaacagaacagaggcctcaggaataatgccacacatctacaaccaacagatctttgacaaccctgacaaaaataagcaatggggaaaggatcccctatttcataaatggcattgggaaaactggctagccatacgcaggaaactgaaactggacctcttcct i ponAbe2.chr21 I 17 I 1352 s nomLeu3.chr25 4473739 1551 + 32716333 tagaagaaatggataaattactgcacacatacaccctcccaagactaaaccaggaagaagtcaaatgcctgaatagaccaataacaagttctgagattgaggcagtacttaatagcctaccaaccagaaaaaaag------------cccgggaccagatggattcacagccagattccatgagaggtacaaagaggagctggtaccattgcttctgaaactattccaaaccaaagaaaaa---ggactcctctttaactttttttatgagggcagcatcatcctgataccgaaacctgccatagacacaccaaaaaaaggaagtttcaggccaatatccctaatgaacatcaatgcaaaaatccttaataaaatactgacaaaccgaatccagcaacacatcaaaaagtttatccaccacgatcaagtcagctccatccctgagatgcaaggctggtccaccatacacaaatcaataaatgtaatccatcacataaacagaaccaataacgaaaaccacatgattatctcaatagatgcagaaaaggccttccacaaaattcaacaccccttcaggctaaaaactctcaataaactaggtatcaatggaatgtatctcaaaataataagagctatttatgacaaacccacagccaataacatactaaataggcaaaatttggaagcattccctttcaaaaccagcacaaggcaagtatgctctctgtcaccattcctactcaacatagtattggaagtgctggccagggtaataaagcaaaggaaagaaataaagggtattcaattaggaaaagaggaagtcaagttgtctctgtttgcagatgacatgattgtatatttagaaaa-----------------------tatacaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtccaaaaatcacaagcatccctatacaccaagagtagaaaaacagagagccaaatcatgagtgaactcccactcacaattgctactaagagaataaaatacctaagaatacaacttacaagggatgtgaaggatctgttccaggagaactacaaacctctgctcaaggaaataagagaggacacaaacaaatgaaaaaacattttatactcatggataggaagaatcaatatcttgaaaattgccatactgcccaaagcaatttttagattcaatactatccccatcaagctaccactgactttctttacagaattag-aaaaaaattactttacatttcatatagcaccaaaaaag---------agccaagacaatcctaagcaaaagaaaacaagggtggagccatcatggtacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagatatatagactgatggaacagaacagagtcctcaggaataacaccacacatctacaaccgtcggatctttgacaaccctgacaaaaacaagcaatggggaaaggatcccctatttaataaatggcattgggaaaactggctagccatatgcaggaaactgaaactggacctcttcct i nomLeu3.chr25 I 23 C 0 s macFas5.chr3 162253057 1583 - 192294377 tagatgaaattgataaatttctggacacacacaccctcccaagactaaaccatgaagaagtcaaatccctgaatagaccaataacaagttctgagattgaggcagtaattaatagcctaccaacc-aaaaaaaag------------cccaggatcagatggattcacagccagattccacgagaggtacaaagaggagctggtaccattccttctgaaactattccaaaccaaagaaaaacagggcctcctttttagctctttttatgaggccagcatcatcctgataccaaaacctgccatagacacaccaaaaaaaggaagtttcagacccatatccctgatgaacatcgatgcaaaaatcctcaataaaatactgacaaaccgaatccagcagcacatcaaaaagtttatccaccaccatcaagtcagctctatccctgagatgaaaggctggtccaacatacacaaatcaataaacgtaatccatcacataaacagaatgaataacgaaaaccacacgattatctcaatagatgaagaaaaggcctttgacaaaattcaacaccccttcaggctaaaaactctcaataaactaggtatcaatagaatgtatctcaaaatgataagagctatttatgacaaacccacagccaataacatactaaatgggcaaaaccaggaagcgttccctttcaaaaccagcacaaggcaagaatgccctttctcaccattcctagtcaacatagtattggaagtgctggccagggcaatcaggcaagaggaagaaataaagcgtattcaaataggaagagaggaagtcaaattgtctctgtttgcagatgacgtgattgtatacttagaaaaccccatcgtttcagcccaaaatctccttaagctgataaacaccttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattccgatacaccaatagtagaaaaacagagagccaaatcatgagtgaactcccactcacaattgctacaaagagaataaaatacctaagaatacaacttacaagtgatgtgaaggacctcttcaaggagaactacaaaccactgttcaaggaaataagagaggacacaaacaaatgaaaaaacatttcatactcatggacaggaagaatcaatatcatgaaaatggccatactgcccaaagcaatttatagattcaatactatccccatcaagctataattgactttcttcacagaattag--aaaaaactattttaaatgtcatatggaaccaaaaaatagcccatatagccaagacaatcctaagcaaaagaaaacaaa-gtggagccatcacagtacctgacttcaaactctactacaaggctacagcaaccaaaacagcatggtactggtaccaaaacagatatagagactggtggaacagaacagaggtctcagggataatgccacacatctacaaccattggatctttgacaaatgtaatgaaaacaagcaattgggaaaggatcccctatttaataaatggcattgggaaaactggctagccacatgcaggaaactgaaactggaccttttcct i macFas5.chr3 I 17 C 0 s papAnu2.chr3 150949041 1582 - 180432695 tagatgaaattgataaatttctggacacacacaccctcccaagactaaaccatgaagaagtcaaatccctgaatagaccaataacaagttctgagattgaggcagtaattaatagcctaccaacc-aaaaaaaag------------cccaggatcagatggattcacagccagattccacgagaggtacaaagaggagctggtaccattccttctgaaactattccaaaccaAAGAAAAACAGGGCCTCCTTTTTAGctctttttatgaggccagcatcatcctgataccaaaacctgccatagacacaccaaaaaaaggaagtttcaggcccatatccctgatgaacatcgatgcaaaaatcctcaataaaatactgacaaaccgaatccagcagcacatcaaaaagtttatccaccaccatcaagtCAGCTCTCTCCCTGAGATGAAAGGCTGgtccaacatacacaaatcaataaatgtaatccatcacataaacagaatgaataacgaaaaccacacgattatctcaatagatgaagaaaaggcctttgacaaaattcaacaccccttcaggctaaaaactctcaataaactaggtatcaatagaatgtatctcaaaatgataagagctatttatgacaaacccacagccaataacatactaaatgggcaaaaccAGGAAGCGTCCCCTTTCAAAACCAGCACAAGGCAagaatgccctttctcaccattcctactcaacatagtattggaagtgctggccagggcaatcaggcaagaggaagaaataaagcatattcaaataggaagagaggaagtcaaattgtctctgtttgcagatgacatgattgtatacttagaaaaccccatcgtttcagcccaaaatctccttaagctgataaacaccttcagcaaagtcccaggatacaaaatcaatgtacaaaaatcacaaccattcctatacaccaatagtagaaaaacagagagccaaatcatgagtgaactcccactcacaattgctacaaagagaataaaatacctaagaatacaacttacaagtgatgtgaaggacctcttcaaggagaactacaaaccactgttcaaggaaata--agaggacacaaacaaatgaaaaaacatttcatactcatggataggaagaatcaatatcatgaaaatggccatactgcccaaagcaatttatagattcaatactatccccatcaagctataattgactttcttcacagaattag--aaaaaactattttaaatgtcatatggaaccaaaaaatagcccatatagccaagacaatcctaagcaaaagaaaacaaaggtgaagccatcacagtacctgacttcaaactctactacaaggctacagcaaccaaaacagcatggtactggtaccaaaacagatatagagactggcggaacagaacagaggcctcagggataatgccacacatctacaaccattggATCTTTGacaaatgtaatgaaaacaagcaattgggaaaggatcccctatttaataaatggcattgggaaaactggctagccacatgcaggaaactgaaactggaccttttcct i papAnu2.chr3 I 16 C 0 s chlSab2.chr2 15038328 1585 - 90373283 tagatgaaattgataaatttatggacacacacactctcccaagactaaaccatgaagaagtcaaatccctgaatagaccaataacaagttctgagattgaggcagtaattaatagcctaccaaccaaaaaaaaag------------cccagtatcagatggattcacagccagattccacgagaggtacaaagaggagctggtaccattccttctgaaactattccaaaccaaagaaaaacagggcctcctttttagctctttttatgaggccagcatcatcctgataccaaaacctgccatagacataccaaaaaaaggaagtttcaggcccatatccctgatgaacatcgatgcaaaaatcctcaataaaatactgaaaaaccgaatccagcagcacatcaaaaagtttatccaccaccatcaagtcagctctatccctgagatgcaaggctggtccaacatacacaaatcaataaacgtaatccatcacataaacagaatgaataaccaaaaccacacgattatctcaatagatgaagaaaaggcctttgacaaaattcaacaccccttcaggctaaaaactctcaataaactaggtatcaatagaatgtatctcaaaatgataagagctatttatgacaaacccacagccaataacatactaaatgggcaaaaccaggaagtgttccctttcaaaaccagcacaaggcaagaatgccctttctcaccattcctactcaacatagtattggaagtgctggccagggcaatcaggcaagaggaagaaataaagcgtattcaaataggaagagaggaagtcaaattgtctctgtttgcagatgacatgattgtatacttagaaaaccccatcgtttcagcccaaaatctccttaagctgataaacaccttcagcaaagtctcagcatacaaaatcaatgtccaaaaatcacaagcattcctatacaccaatagtagaaaaacagagagtcaaatcatgagtgaactcccactcacaattgctacaaagagaataaaatacctaagaatacaacttacaagtgatgtgaaggacctcttcaagaagaactacaaaccactgttcaaggaaataagagaggacacaaacaaatgaaaaaacatttcatactcatggataggaagaatcaatatcatgaaaatggtcatactgcccaaagcaatttatagattcaatactatccccatcaagctataattgactttcttcacagaattag--aaaaaactattttaaatgtcatatggaaccaaaaaatagcccatatagccaagacaatcctaagcaaaagaaaacaaaggtggagccatcacagtacctgacttcaaactctactacaaggctacagcaaccaaaacagcatggtactggtaccaaaacagatatagagactggcggaacagaacagaggcctcagggataatgccacacatctacaaccattggatctttgacaaatgtaatgaaaacaagcaattgggaaaggataccctatttaataaatggcattgggaaaactggctagccacaggcaggaaactgaaactggaccttttcct i chlSab2.chr2 I 17 C 0 e calJac3.chr21 21936366 2256 + 50472720 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e rheMac3.chr3 168585943 6042 - 198365852 I a score=93622.000000 s hg38.chr21_KI270874v1_alt 101755 72 + 166743 tacaccttatacaaaaattaactcaagttggattaaagacttaaatgtaagacc--aaaaaccataaaaactct s panTro4.chr21 3715294 72 + 32799110 tacaccttatacaaaaattaactcaagttggattaaagacttaaatgtaagacc--aaaaaccataaaaactct i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4475290 74 + 32716333 tacaccttatacaaaaattaactcaagttggattaaagacttaaatgtaagacctaaaaaaccataaaaactct i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162254640 72 - 192294377 tacaccttatacaaaaattaactcaagatggattaaagacttaaatgtaagacc--taaaaccatagaaactct i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150950623 72 - 180432695 tacaccttatacaaaaattaactcaagatggattaaagacttaaatgtaagacc--taaaaccatagaaactct i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15039913 72 - 90373283 tacaccttatacaaaaattaactcaagatggattaaagacttaaatgtaagacc--taaaaccatagaaactct i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21936366 2256 + 50472720 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e rheMac3.chr3 168585943 6042 - 198365852 I e ponAbe2.chr21 16977543 1352 + 48394510 I a score=911706.000000 s hg38.chr21_KI270874v1_alt 101827 565 + 166743 agaagaaaacctaggcaatgccattcaggacataggcatgggcaaa-acttcatgactaaaacaccaaaaacaatagcaacaaaagccaaaattgacaaatgggatctaattaaactaaacagcttctacacagcaaaagaaactatcatcagagtgaacagacaacctacagaatagaagaaaatgtttgcaatctatccatct-gacaaagggttaatatccagaatttacaaggagcttaaacaaatttacaagaaaaaa----acaaccccctcaaaaagtgagtgaaagatatgaacaaacacttctc-aaaagaagacatttatgtgaccaacaaacata--tttaaaaaaagcttatcatcactgg----tcattagagaaatgcaaatcaaaa-ccacaatgagataccatctcacaccagttagaatggcgatcattaaaaagtcaggaaacaacagatgctggagaggatgtggagaaataggaatgcttttacactgttttcccaccactgttggtgggagtgtaaattagttcaaccattgtgcaatacagtgtggcgattcctcaa s panTro4.chr21 3715366 565 + 32799110 agaagaaaacctaggcaatgccattcaggacataggcatgggcaaa-acttcatgactaaaacacaaaaagcaatagcaacaaaagccaaaattgacaaatgggatctaattaaactaaacagcttctacacagcaaaagaaactatcatcagagtgaacagacaacctacagaatagaagaaaatgtttgcaatctatccatct-gacaaacggttaatatccagaatttacaaggatcttaaacaaattcacaagaaaaaa----acaaccccctcaaaaagtgagtgaaagatatgaacaaacacttctc-aaaagaagacatttatgtgaccaacaaacata--tttaaaaaaagcttatcatcactgg----tcattagagaaatgcaaatcaaaa-ccacaatgagataccatctcacaccagttagaatggcgatcattaaaaagtcaggaaacaacagatgctggagaggatgtggagaaataggaatgcttttacactgttttcccaccactgttggtgggagtgtaaattagttcaaccattgtggaatacagtgtggcgattcctcaa i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4475364 548 + 32716333 agaagaaaacctaggcaatgccattcaggacataggcatgggcaaagacttcatgactaaaacatcaaaagcaatagcaacaaaagccaagattgacaaatgggatctaattaaactaaagagcttctacacagcaaaagaaactatcatcagagtgaacagacaacctacagaataggagaaaatatttgcaatctagccatct-gacaaagggttaatatccagaatttacaaggagcttaaacaaatttacaagaaaaaa----acaa-cccctcaaaaagtgagtgaaagatataaacaaacgcttctc-aaaagaagacatttatgtggccaacaaacata-----aaaaaacgcttatcatcactgg----tcattagagaaatgcaaatcaaaa-ccacaatgggataccatctcacaccagttagcatggcaatcattaaaaagtcaggaaacaacagatgctggagaagatatggagaaataggaatactttta--------------cactgttggtgggagtgtaaattagttccaccattgtgtaatacagtgtggcaattcctcaa i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162254712 550 - 192294377 agaagaaaacctaggcaatgtcattcagcacataggcatgggcaaagacttcatgactaaaacaccaaaagcaatggcaacaaaagtcaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacagacaacctacagaatgggagaaattttttgcaatctatccatct-gacaaagggctaatatccagaatttacaaagagcttaaacaaatttacaag-aaaaa----acaaccccctcaaaaagtgagcaaaagatatgaacaaacacttctc-aaaaaaagacatttatgtggccaacaaacata--ttttaaaaa-gcttatcatcaccaa----tcattagagaaatgtaaatcaaaa-ccacaatgagatatcatctcacaccagttagaatggtgatcattaaaaagtcaggaaacaacagatgctggagaagatgaggagaaataggaatgctttta--------------cactgttggtgggagtgtaaattagttcaaccattgtggaagacagtgtggcaattcctcaa i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150950695 550 - 180432695 agaaggaaacctaggcaatgtcattcagcacataggcatgggcaaagacttcatgactaaaacaccaaaagcaatagcaacaaaagtcaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactatcatcagagtgaacagacaacctacagaatgggagaaattctttgcaatctatccatct-gacaaagggctaatatccagaatttacaaagagcttaaacaaatttacaag-aaaaa----acaaccccctcaaaaagtaagcaaaagatatgaacaaacacttctc-aaaaaaagacatttatgtggccaacaaacata--ttttaaaaa-gcttatcatcaccaa----tcattagagaaatgcaaatcaaaa-ccacaatgagataccatatcacaccagttagaatggtgatcattaaaaagtcaggaaacaacagatgctggagaaaatgaggagaaataggaatgctttta--------------cactgttggtgggagtgtaaattagttcaaccattgtggaatacagtgtggcaattcctcaa i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15039985 550 - 90373283 agaagaaaacctaggcaatgtcattcaggacataggcatgggcaaagacttcatgactaaaacaccaaaagcaatagtaacaaaagtcaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactatcatcagagtgaacagacaacctacagaatgggagaaattttttgcaatctatccatat-gacaaagggctaatatccagaatttacaaagagcttaaacaaatttacaag-aaaaa----acaa-cccctcaaaaagtgagcaaaagatatgaacaaacacttctcaaaaaaaagacatttatgtggccaacaaacata--ttttaaaaa-gcttatcatcaccaa----tctttagagaaatgcaaatcaaaa-ccacaacgagataccatctcacaccagttagaatggtgatcattaaaaagtcaggaaacaacagatgctggagaagaggaggagaaataggaatgctttta--------------cactgttggtgggagtgtaaattagttcaaccattgtggaatacagtgtggcaattcctcaa i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21938622 558 + 50472720 agaaaaaaacctaggcaataccattcaggatataggcatgggcaaggacttcatgactaaaataccaaaagcaacggcaac-aaatccaaaattgacaaatcggatctaattaaactaaagagcttctgcaaagcaaaagaaactgtcatccgagtgaacaggcaacctacagaatggaagaacatctttgcaatctatccatctaaacaaagggctaatatcccgaatctacaaggaacttaaacaaatttacaagaaaaaaactgacaaccccatc-aaaattaggcaaaagatataaatagacatttctc-aaaagaagacatctatgccaccaacaaacttttttttttaaat-gttcattatcactgatgattaattagagaaatgcaaatcaaaacccacaatgtggtaccatctcatgccagttagaatggcgatcattaaaaagtcagga---aacagatgctggagagaatgtggagaaataggaacactttta--------------caatgttgatgggagtataagttagttcaaccaatgtggaagacagtgtggcaattcctcaa i calJac3.chr21 I 2256 C 0 e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e rheMac3.chr3 168585943 6042 - 198365852 I e ponAbe2.chr21 16977543 1352 + 48394510 I a score=1124475.000000 s hg38.chr21_KI270874v1_alt 102392 488 + 166743 ggatctagaaccagaaataccatctgacccagcaatcccattactgggtatatacccaaaagattataaatcattctaccataaagacacatgcacacacatgtttactgcagcactgttcacaatagcaaatatttggaaccaacacaaatgcccatcaatgatagactggat-aaaggaaatgtggcacatataaactatggaatactatgcagccataaaaccaggatgagttcatgtcctttgcagggacatggatgaagcttgataccatcattctcagcaaactaacacaggaacagaaaaccaaacaccacatgttctcactcataagtgggagctgaacaatgagaacacatggacacagggaggggaacatcacacaccggggcctgtcagggggtggggcgctaggggacggatagcactaagagaaatacctaacatagattatggcttgatgggtgcagcaaaccaccatggcacat s panTro4.chr21 3715931 488 + 32799110 ggatctagaaccagcaataccatttgacccagcaatcccattactgggtatatacccaaaagattataaatcattctaccataaagacacatgcacacatatgtttattgcagcactgttcacaatagcaaatatttggaaccaacacaaatgcccatcaatgatagactggat-aaaggaaatgtggcacatataaactatggaatactatgcagccataaaaccaggatgagttcatgtcctttgcagggacatggatgaagctggataccatcattctcagcaaactaacacaggaacagaaaaccaaacaccacatgttctcactcataagtgggagttgaacaatgagaacacatggacacagggaggggaacatcacacacctgggcttgtcagggggtggggcgctaggggagggatagcactaggagaaatacctaacatagattatggcttgatgggtgcagcaaaccaccatggcacat i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16978895 488 + 48394510 ggatctagaaccagaaatatcatttgacccagcaatcccattactaggtatatacccaaaagattataaatcattctactataaagacacatgcacacatatgtttattgcagcactgttcacaatagcaaatatttggaaccaacctaaatgcccatcaatgatagactggat-aaaggaaatgtggcacatatacaccgtggaatactatgcagccataaaacaaggatgagttcatgtcctttgcagggacatggatgaagctggataccatcattctcagcaaactaacacaggaacagaaaaccaaacaccacatgttctcactcataagtgggagttgaacaatgagaacacatggacacagggaggggaacatcacacactggggcctgtcagggggtggggtgctaggggagggataacattaggagaaatacctaatatagattatggcttgatgggtgcagcaaatcaccatggcacat i ponAbe2.chr21 I 1352 C 0 s nomLeu3.chr25 4475912 488 + 32716333 ggatctagaaccagaaataccatttgacccagcaatcccattactgggtatatacccaaaagattataaatcattcttctataaagacacatgcacacgtatgtttattgcagcactgttcacaatagcaaatatttggaaccaacccaaatgcccatcaatgatagactggataaaaggaaatgtggcacatatacactatggaatactacgcagccataaaa-aatgatgagttcatgtcctttgcagggacatggatgaagctggataccatcattctcagcaaactaacacaggaacagaaaaccaaacactgcatgttctcactcataagtgggagttgaacaatgagaacacatggacacagggaggggaacatcatacacagaggcctgtcagggggtggggtgctaggggagggatagcattaggagaaatacctaatatagattatggcttggtgggtgcagcaaaccaccgtggcacat i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162255262 486 - 192294377 ggatctagaaccagaaataccatttgacaaagcaatcccattacggggtatatacccaaaagattataaatcattctactataaagacacaggcacatgtatgtttattacagcactgttcacaatagcaaatatttggaaccaacccacatgctcatcaatgatagactggat-aaaggaaatatggcacatatacaccatggaatattatgcagccataaaacaaggat--gtttatgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaaacactgcatgttctcagtcataagtgggagttgaacaatgagaacatatggacacagggaagggaacatcacacaccagggcctgtcagggggtggggcactaggggagggatagaattaggagaaatacctaatatagattatggcttgatgagtgcagcaaaccaccacagcacat i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150951245 486 - 180432695 ggatctagaaccagaaataccatttgacaaagcaatcccattactgggtatatacccaaaagattataaatcattctactataaagacacaggcacatgtatgtttattacagcactgttcacaatagcaaatatttggaaccaacccaaatgcgcatcaatgatagactggat-aaaggaaatatggcacatatacaccatggaatattatgcagccataaaacaaggat--gtttatgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaactaacacaggaacagaaaactaaacactgcatgttctcagtcataagtgggagttgaacaatgagaacatatggacacagggaagggaacatcacacaccagggcctgtcagggggtggggcactaggggagggatagaattaggagaaatacctaatatagattatggcttgatgagtgcagcaaaccaccatggcacat i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15040535 486 - 90373283 ggatctagaaccagaaataccatttgacaaagcaatcccattactgggtatatacccaaaagattataaatcattctactataaagacacaggcacatgtatgtttattacagcactgttcacaatagcaaatatttggaaccaacccaaatgctcatcaatgatagactggat-aaaggaaatatggcacatatacaccatggaatattatgcagccataaaacaaggat--gtttatgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaactaacacaggaacagaaaactaaacactgcatattctcagtcataagtaggagttgaacaatgagaacatatggacacagggaagggaacatcacacaccagggcctgtcagggggtggggcactaggggagggatagaattaggagaaatacctaatacagattatggcttgatgagtgcagcaaaccactatggcacat i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21939180 487 + 50472720 ggatctagagctagaaatatcattcgacccagcaatcccattactatgtatatacccagaggattatatatcattctcctataaagacacatgcacatgtatgtttattgcagcactattcacaatagcaaagacttggaagcaacccaaatgcccatcaatgatagactgaat-aaagaaaatgtggcacatatacaccatggaatattatgcagtcataaga-aagaatgagttcatgtcctttgcagggacatggatgaagctggaaaccatcattctcatcaaactaacacaggaacagaaagccaaacaccgcatgttcttgcttacaagtaggagttgaacaatgaaaatacatagacacggcaaggggaacatcacactccggggcctgtcaggtgatatggggctaggagagggataatattaggaaaaatatctaatgtcaatgatgggttaatgggtgcagcaaatcaccatggcactt i calJac3.chr21 C 0 C 0 e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e rheMac3.chr3 168585943 6042 - 198365852 I a score=4009794.000000 s hg38.chr21_KI270874v1_alt 102880 1478 + 166743 gtatacctgtgtaacaaacttgcacattccgcacaggtacctcagaatttaaagtataataattaaaaaaaaaAAAACAGAATTTCTGCAATACTATAGGTGAAGAAAAAAA-----------------------A-AATAAAA-CTGACAATCTTTCCAGGAACTGAATTATAAAGTCAGCAGAATTTCAGAGAAAGTAAAATTTTAAAATAGTCAAGTCTGCAATG------CCTAGACCAAAACTTTGATTAGTACACATGAAATTAAAATATCCAGGTGTATG-ACTCAAAAATCTTAAATATggctgggt-tagtggctcatacctgtaatcctagcacttcaggaggccaatgtgggatgattacttgaggccaggagttcgagaccaccctgagcaacatagggagaccttgtctctacaaaaaaaaaagaagagagagagagagagaaatagcagggtcaacatggtgcacacctgtagtcctaactactcaaaagacagagta---agaatcatttgagctcaggaggtgaaggttgcagtgaactataatttcaacaccgcactttagcctgggtgacagagagagattctgtctcaagaaaaataaataaaTACAATAAAATCTTGAATACCTGGATTCTCTTAAACCTTCTGGGTCCACCAGAAAGGATCCGTTTTTCCTTGTAAAAAATGAACACTGCTCCCTTCgtttggctttgtccccacccaaatctcatcttgaattgtaactcccacaattcccacttgtaataggaggaacctggtgggaggtaattgaatcatgggggcgggtctttcctatgctgttctcatggtgctgaataagtctcatgcaagctgatgattttaaatatgggagtttccatgcaaaagctctctctttttgtctactgccatccacgtaagacatgatttactcctccttgccttccaccatgattgtgaggcctccccacccatgaggaactgtaaatccaataaatctcttttttttgtaaattgcccagtcttgggtatgtcttcatcagcagcatgaatacggactaatacagtaaattggtatcagtagagtggggccctgctgaaaagatacccaaaaatgtagaagcaaatttggaagtgggtaacaggcagaggttggaacagtttggagggctcagaagaatccaggaaaataaggaaaactttggaacttcctagagacatgttaaatggctttgaacaaaatgctgatagtaatatggacaatgaaattcaggctgaggtgatttcagatggagatgagaaacttgttgggtactggagtaaaggtaactcttgctattttttatcaaagagaccagtgacattttgcccctgccctagagatttgtggaa-tttgaacttgagagagatgatgtagggtatttgatggaagaaatttctaagcagcaaagcattcaagatgtgacttgggtgctgttaaagtcattcagttttaaaa s panTro4.chr21 3716419 1471 + 32799110 gtatacctgtgtaacaaacttgtacattccgcacaggtacctcagaatttaaagtataataattaaaaaaaaaAAAACAGAATTTCTGCCCTACTATAGGTGAAGAAAAAAA-----------------------ATAATAAAA-CTGACAATCTTTCCAGGAACTAAATTATAAAGTCAGCAGAATTTCAGAGAAAGTAAAATTTTAAAATAGTCAAGTCTGCAATG------CCTAGACCAAAACTTTGATTAGTACACATGAAATTAAAATATCCAGGTGTATG-ACTCAAAAATCTTAAATATggctgggt-tagtggctcatacctgtaatcctagcacttcaggaggccaatgtgggatgattacttgaggccaggagttcgagaccaccctgagcaacatagggagactttgtctctacaaaaaaaaa---------aaagagagagaaatagcagggtcatcatggtgcacacctgtagtcctaactactcaaaagacagagta---agaatcatttgagctcaggaggtgaaggttgcagtgaactataatttcaacactgcactttagcctgggtgacagagagagattctgtctcaagaaaaataaataaaTACAGTaaaatcttgaagacctggattctcttaaaccttctgggtccactagaaaggatccgtttttccttgttaaagatgaacactgctcccttcgtttggctttgtccccacccaaatctcatcttgaattgtaactcccacaattcccacgtgtaataggaggaacctggtgggaggtaattgaatcatgggggcgggtctttcctgtgctgttctcatggtgctgaataagtctcatgcaagctgatgactttaaatatgggagtttccacgcaaaagctctctctttttgtctactgccatccacgtaagacatgacttactcctccttgccttccaccatgattgtgaggcctccccacccatgaggaactgtaaatccaataaatctcttttttttgtaaattgcccagtcttgggtatgtcttcatcagcagcatgaatacggactaatacagtaaattggtatcagtagagtggggcactgctgaaaagatacctgaaaatgtagaagcaaatttggaactgggtaacaggcagaggttggaacagtttggagggttcagaagaatccaggaaaataaggaaaactttggaacttcctagagacatgttaaatggctttgaacaaaatgctgatagtaatatggacaatgaaattcaggctgaggtgatttcagatggagatgagaaacttgttgggtactggagtaaaggtaactcttgctattttttatcaaagagaccagtgacattttgcccctgccctagagatttgtggaattttgaacttgagagagatgatgtagggtatttgatggaagaaatttctaagcagcaaagcattcaagatgtgacttgggtgctgttaaagtcattcagttttaaaa i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16979383 1468 + 48394510 gtatacctgtgtaacaaacttgcaccttctgcacatttacctcagaatttaaagtataataattaaaaaaaaaAAA--CGAATTTCTGCTCTACTATAGCTGAAGAAAAAAA-------------------------AATaaaa-ctgagaatctttccaggaactgaattatgaagctagcagaatttcagagaaagtaaaattctaaaatagtcaagtctgcaatg------cctagaccaaaactttgattagtacacatgaaattaaaatatccaggtatatg-actcaaaaatcttaaatatggctgggt-tagtggcttatacctgtaatcctagcactttgggaggccaaggtgggatgactacttgaggccaggagtttgagaccaccctgagcaacatagggagaccttgtctctacaaaaaaaaa------aagagagagagagaaatagcagggtcatcatggtgcacacctgtagtcctagctactcagaagacagagta---aaaatcactccagctcaggaggtcaaggttgcagtgaactataattgcagcactgcactttagcctgggtgacagagagagattctgtctcaagaaaaataaataaatacaataaaatcttgaatacctggattctcttaaaccttctgggtctaccagaaaggatccattttaccttgttaaagatgaacactgctcccttcgtttggctttgtccccacccaaatctcatcttgaattgtaactcccataattcccacgtataataggaggaacctggtgggaggtaattgaatcat-ggggcgggtctttcctgtgctgttctcacagtgctgaataagtctaatgcaagctgatgattttaaatatgagagtttccccacaaaagctctctctttttgcctactgccatccatgtaagatgcgacttactcctccctgccttccaccatgattgtgaggcctccccagccatgaggaactgtaaatccaataaatctc-tttttttgtaaattgccctgtcttgggtatgtctttatcggcagcacgaatacagactaatgcaGTaaattggtatcagtagagtggggcactgctgaaaagatacctgaaaatgtagaagaaaatttggaactgggtaacaggcagaggttggaacagtttggagggctcagaagaagccaggaaaataaggaaaactttggaacttcctagagacatgttaaatggctttgaacaaaatgctgatagtaatatggacaatgaaattcaggctgaggtgatttcagatggagataagaaacttgttgggtactggagtaaaggtaactcttgccattttttatcaaagagaccagtggcattttgcccctgccctagagattggtggcactttgaacttgagagagatgatgtagggtatttgatggaataaatttctaagcagcaaagcattcaagatgtgactttggtgctgttaaagtcatttagttttaaaa i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4476400 1461 + 32716333 gtacacctgtgtaacaaacttgcacgttctgcacatgtacctcagaatttaaagtataataattaaaaa-----------aaTTTCTGCTCTAGTAAAGCTGAAGAAAAAA--------------------------AATAAAA-CTGAGAATCTTTCCAGGAATTGAATTATAAAGTTAGCAGAATTTCAGAGAAAGTAAAATTCTAAAATAGTCAAGTCTGCAATG------CCTAGACCAAAACTTTGATTACTACACATGAAATTAAAATATCCAGGTGTATG-ACTCAAAAATCTTAAATATGGCTAGGT-TACtggctcatacctgtaatcctagcacttcaggaggccaaggtgggatgattacttgaggccaggagttcaagaccaccctgagcaacatagggagaccttgtctctgcaaaaaaaaa-aaaaagagagagagagagaaatagcaggatcatcatggtgcacacctgtagtcctaactactcaaaagacagagta---agaatcacttgagctcaggaggtcaaggttgcagtgaactataattgcaacactgcactttagcctgggtgacagagagagattctgtctcaagaaaaataaataaaTACAATaaaatcttgaatacctggattcacttaaaccttctgggtccactagaaaggatctgtttttccttgttaaagATGAACACTGCTC----Cgtttggctttgtccccacccaaatctcatattgaattgtaactcccacaatccccaagtgtaataggaggaacctggtgggaggtaattgaatcacgggggcgggtctttcctgtgctgttctcatggtgctgaataagtctcatgcaagctgatgattttaaatatgggagtttccccacaaaagctctctctttttgcctactgccatccatgtaagacattacttactcctccttgccttccaccatgattgtgaggcctccccagccatgaggaactgtaaatccaataaatctctttttttggtaaattgcccagtcttgggtatgtctttatcagcagcatgaatatggactaatacagtaaattggtatcagtagagtggggcactgctgaaaagatacccgaaaatgtagaagcaaatttggaactgggtaacaggcagaggttggaacagtttggagggctcagaagaggccaggaaaataaggaaaactttggaacttcctagagacatgttaaatagctttgaacaaaatgctgatagtaatatggacaatgaaattcaggctgaggtgatttcagatggagatgagaaatttgttgggtactggagtaaaggtaactcttgctattttttatcaaagagaccagtggcattttgcccctgccctagagatttgtggaactttgaacttgagagagatgatgtagggtatttgatggaagaaatttctaagcagcaaagcatttaagatgtgacttgggtgctgttaaagtcattcagttttaaaa i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168591985 1411 - 198365852 gtatacctgtgtaacaaacttgcacgttctgcacatgtaccccagaatttaaagtacaataatttaaaa------aaCagaatttctgctctactatagctgaagagaaaaa-------------------------aataaaa-ctgagaatctttccaggaactgaattataaagttagcagaatttcagagaaagtaaaattctaaaatagtcaagtctgcaatg------cctagaccaaaactttgattagtacacatgaaattaaaatatccaggtgtatg-actcaaaaatcttaaatatggctgggt-tagtggctcacacctgtaatcccagaacttcaggaggccaaggtgggatgattgcttgaggccaggagtttgagaccaccctgagcagcatagggagaccttgcctctaaaaaaaaaa----agagagagagagagagaaatagcaggatc---------------------------------------------------atcacttgagactaggaggtcaaggctgcagtgaactataattgtaacactgcactttatcctgggtgac----agagattctgtctcaagaa----aaataaatacaataaaatcttgaatacccagattatcttaaactttctgggtccactagaaaggatccgtttttccttgttaaagATGAACACTGCCCCCTTTgtttgtctttgtccccacccaaatctcatcttgaattgtaactcccacaattcccatgtgtaataggaggaacctggtgggaggtaatttaatcatgggtgcaggtctttcctgtgctgttctcatcatggtgaataagtctcatgcaagttgatggttttaaaactgggagtttacccacaaaagttctctctttttgcctactgccatccatgtaagacgtgacttactccaccttgccttccgccataattgtgaggcatccccagccataaggaactgtaagtccaataaatctctttattttgtaaattgaccagtcttggatatgtctttatcagcagcatgaatatggaccaatacagtaaattggtaacagtagagtggggcactgctgaaaagatacccaaaaacgtagaggcaaatctggaacgaggtaacaggaagagattggaacagtctggagggctcagaagaagccaggaaaataagg-aaattttggaacttcctagagacttgttaaatggctttgaacaaaatgctaatagtaatatggacaatgaaattcaggctgaggtgatttcagatggacatgagaaatttgttgggtactagagtaaaggtaatgcttgatattttttatcaaagagactagtggcattttacccctgccctagagatttgtggaactttgaacttgagagagatgatgtatggtatttgacagaagaaattcctaagcagcaaagcattcaagatgtgacttgggtgctgttaaaagcattcagttttaaaa i rheMac3.chr3 I 6042 C 0 s macFas5.chr3 162255748 1415 - 192294377 gtatacctgtgtaacaaacttgcacgttctgcacatgtaccccagaatttaaagtacaataatttaaaa------aaCAGAATTTCTGCTCTACTATAGCTGAAGAGAAAAA-------------------------AATAAAA-CTGAGAATCTTTCCAGGAACTGAATTATAAAGTTAGCAGAATTTCAGAGAAAGTAAAATTCTAAAATAGTCAAGTCTGCAATG------CCTAGACCAAAACTTTGATTAGTACACATGAAATTAAAATATCCAGGTGTATG-ACTCAAAAATCTTAAATATggctgggt-tagtggctcacacctgtaatcccagaacttcaggaggccaaggtgggatgattgcttgaggccaggagtttgagaccaccctgagcagcatagggagaccttgcctctaaaaaaaaaaagagagagagagagagagagaaatagcaggatc---------------------------------------------------atcacttgagactaggaggtcaaggctgcagtgaactataattgtaacactgcactttatcctgggtgac----agagattctgtctcaagaa----aaataaaTACAATAAAATCTTGAATACCCAGATTATCTTAAACTTTCTGGGTCCACTAGAAAGGATCCGTTTTTCCTTGTTAAAGATGAACACTGCCCCCTTTgtttgtctttgtccccacccaaatctcatcttgaattgtaactcccacaattcccatgtgtaataggaggaacctggtgggaggtaatttaatcatgggtgcaggtctttcctgtgctgttctcatcatggtgaataagtctcatgcaagttgatggttttaaaactgggagtttacccacaaaagttctctctttttgcctactgccatccatgtaagacgtgacttactccaccttgccttccgccataattgtgaggcatccccagccataaggaactgtaagtccaataaatctctttattttgtaaattgaccagtcttggatatgtctttatcagcagcatgaatatggaccaatacagtaaattggtaacagtagagtggggcactgctgaaaagatacccaaaaacgtagaagcaaatctggaattaggtaacaggcagagattggaacagtctggagggctcagaagaagccaggaaaataagg-aaattttggaacttcctagagacttgttaaatggctttgaacaaaatgctaatagtaatatggacaatgaaattcaggctgaggtgatttcagatggagatgagaaatttgttgggtactggagtaaaggtaatgcttgatattttttatcaaagagactagtggcattttactcctgccctagagatttgtggaactttgaacttgagagagatgatgtatggtatttgacagaagaaattcctaagcagcaaagcattcaagatgtgacttgggtgctgttaaaagcattcagttttaaaa i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150951731 1404 - 180432695 gtatacctgtgtaacaaacttgcacgttctgcacatgtaccccagaatttaaagtacaataatttaaaa------aacagaatttctgCTCTACTAtagctgaagagaaaaa-------------------------aataaaa-ctgagaatcTTTCCAGGAACTGAAGTATAAAGTTAGCAGAATTTCAGAGaaagtaaaattctaaaatagTCAAGTCTGCAATG------CCTAGACCAAAACTTTGATTAGTacacatgaaattaaaatatccaGGTGTATG-actcaaaaatcttaaatatgGCTGggt-tagtggctcacacctgtaatcccagaacttcaggaggccaaggtgggatgattgcttgaggccaggagtttgagaccaccctgagcagcatagggagaccttgcctctaaaaaaaaaaa---agagagagagagagagaaatagcaggatc---------------------------------------------------atcacttgagcctaggaggtcaaggctgcagtgaactataattgtAACACTGCACtttatcctgggtgac----agagattctgtctcaagaa----aaataaagacaataaaatctTGAATACCCAGATTATCTTAAACTTTCTGGGTCCACTAGAAAGGATCCGTTTTTCCTTGTTAAAGATGAACACTGCCCCCTTTGTTtgtctttgtccccacccaaatctcatcttgaattgtaactcccacaattcccatgtgtaataggaggaacctggtgggaggtaatttaatcatgggtgcaggtctttcctgtgctgttctcatcatggtgaataagtctcatgcaagttgatggttttaaaactggGAGTTTACCCACAaaagctctctctttttgcctactgccatccatgtaagacgtgacttactccaccttgccttccgccataattgtgaggcatccccagccataaggaactgtaagtccaataaatctctttattttgtaaattgaccagtcttggatatgtctttatcagcagcatgaataTGGACC--------AAATTGGTaacagtagagtggggcactgctgaaaagatacccaaaaatgtagaagcaaatctggaactaggtaacaggcagagattggaacagtctggagggctcagaagaagccaggaaaataagg-aaattttggaacttcctagagacttgttaaatggctttgaacaaaatgctaataataatatggacaatgaaattcaggctgaggtgatttcagatggagatgagaaatttGTTGGGTACTGGAGTAAAGGTAATGCTTGATATTTTTTATCaaagagactagtggcattttacccctgccctagagatttgtggaactttgaacttgagagagatgatgtaCAGTatttgacagaagaaatttctaagcagcaaagcattcaagatgtgacttgggtgctgttaacggcattcagttttaaaa i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15041021 1408 - 90373283 gtatacctgtgtaacaaacttgcacgttctgcacatgtaccccagaatttaaagtacaataatttaaaa------aaCAGAATTTCTGCTCTACTATAGCTGAAGAGAAAAA-------------------------AATAAAA-CTGAGAATCTTTCCAGGAACTGAATTATAAAGTTAGCAGAATTTCAGAGAAAGTAAAATTCTAAAATAGTCAAGTCTACAATG------CCTAGACCAAAACTTTGATTAGTACACATGAAATTAAAATATCCAGGTGTATG-ACTCAAAAATCTTAAATATggctgggt-tagtggctcacacctgtaatcccagaacttcaggaggccaaggtgggatgattgcttgaggccaggagtttgagaccaccctgagcagcatagggagatcttgcctctaaaaaaaaaaa---agagagagagagagagaaatagcaggatc---------------------------------------------------atcacttgagcctaggaggtcaaggctgcagtgaactataattgtaacactgcactttatcctgggtgac----agagattctgtctcaagaa----aaataaaTACAATAAAATCTTGAATACCCAGATTATCTTAAACTTTCTGGGTCCACTAGAAAGGATCCGTTTTTTCTTGTTAAAGATGAACACTGCCCCC----tttgtctttgtccccacccaaatctcatcttgaattgtaactcccacaatttccatgtgtaataggaggaacctggtgggaggtaatttaatcatgggtgcaggtctttcctgtgctgttctcctcatggtgaataagtctcatgcaagttgatggttttaaaaatgggagtttacccacaaaagctctctctttttgcctactgccatccatgtaagacgtgacttactccaccttgccttctaccataattgtgaggcatccccagccataaggaactgtaagtccaataaatctctttattttgtaaattgaccagtcttggatatgtctttatcagcagcatgaatatggaccaatatagtaaattggtaacagtagagtggggcactgctgaaaagatacccaaaaacgtagaagcaaatctggaactaggtaaccagcagagactggaacagtctggagggctcagaagaagccaggaaaataagg-aaattttggaacttcctagagacttgttaaagggctttgaacaaaatgctaatagtaatatggacaatgaaattcaggctgaggtgatttcagatggagatgagaaatttgttgggtactggagtaaaggtaatgcttgatattttttatcaaagagactagtggcattttacccttgccctagggatttgtggaactttgaacttgagagagatgatgtacagtatttgacagaagaaatttctaagcagcaaagcattcaagatgtgacttgggtgctgttaaaggcattcagttttaaaa i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21939667 1470 + 50472720 gtatacctatgtaacaaacccgcacattctgcacatgtatcccagaacttatagta----attttaaaa-----aaaaGGACTTTCTGTTC---TATAGCTGAAGGGAAAAATAAAAACAAAACAAACAAAAAAAA-AATGAAACCCAAGGATCTTCTCAGGAACTGAATTATAAAGTTAGCAGAATTTCAGAGAAAGTGAAAGTCTAAAATATACAAGTCTGCAATGCCAAGACCAAGACCAAGACTTAGTTTAGTACACATGAAATTGAAATATTGAGGTCTATGCACTCAAAAATCTTAAATATggctgggtccagtggctcacacctgtaatcccagcacttcagaagaccaagatgtgaggattgcttgaggccagtagttaaagatcagcctgagcaacatagcaagaccttgtctctacaaagaaaaa------------------aaaatagcaaggtcatcatg--gcacacctatagtcctaactactcaagagacatagtaaagagaatcacttgagcccaagaggtcaaggctgcagtgaactataattgcaacactgcactccagcctgggtgacagcgtgagactctacatcaagataaataaataaaTA---TAACATCTTGAATACTCAGATTCTCTTAAACCTTTTGGGCCCTGGAGAAAGGATTCATTTCTCCTTGTTAAAGATGAACACTGCCCTCTtggtttggctgtg--cccatccaaatctcatcttgaattgtaactcccataattcccacatgtaatgggaggaacctagtgggagataattcaatcatgagggcaggtacttccagtgctgttctcatggtggtgagtaagtctcatgcaatctgatggttttaaaaattggagtttcaccacaaa-----tctacttttgcctgctgccatccatgtaagacgtgacttactcctccttgctgtccaccatgattgtgaggcctccccagcaatggggaactatagggtcattaaacctcttccttttgtaaatagcctggtctcaggtatgtcttattcagcagcctgaaaacagactaatacagtaaaccagtaccagtagagtggggcattgctgaaaagatacccaaaaatgtggaagcaattttgaaactgggtaacagacagaggttagaactgtttgaagggctcagaagaaaccaggaaaatatggaaaactttggaacttccaagagacttgttgaatggctttcaacaaaacatcaatagtaatatagacaataaaatccagtctgagcttgtctcagatggagatgagaaacttgttgggtactggagtaaaggtaactcttat--ttttttagcaaagagactggtggcattttgctcctgccctagggattcgtgggcctttgaacttgagagagataatgtatggcatcaggtgaaaaaaatttctaaacagctacgcattcaagaagtgacatggattctgttaaaggcattcagttttaaaa i calJac3.chr21 C 0 I 436 e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I a score=3879037.000000 s hg38.chr21_KI270874v1_alt 104358 1300 + 166743 gggaaacagagcataaaagtttggaaaatttgcagcctgacaat-tgatagaaaagaaaatctcattttctga-gaagaaatccaagctggatgcagaaatttgcataagtgacacggagccgaatgttaatctccaagacaatggggaaaatatctccagggagtatcagaggctgtcatggcagctcttcccatcacagtcccagaggcctaggaggaaaaggtggttttgtttccggccccagggtccccatgctgtgtgtagcatagggacttggtgccctatgtcccagctgctccagccgtggctgacaggggccaatgtagagctcaagctgcagcttcagagggtgcaagcc----tcaagacttggcagcttatacatgatgttgagcctgccagtgcacagaagtcaagaattgggctttgggaccctccacctaaatttcggaggttgtatggaagtgcctggatgttcaggcagaagtttgctgcaggggtggcactttcatggagaacctctgctagggcagtgcacaaggtaaatgtggggtcggaacccccaaacagagctcctacttgggcactgcctagtggagctgcgagaagaaggccaccatcttccagaccctagaatggtagatccaccaacagcttgcaccgtgcacctggaaaagccacagagactcaatgccaacccatgaaatcagcctggaaggaggctgta-cctgcaaagccacaggaatggagctgctcaaggccgtgggaacccaccacttgcatcagcatgacctggatgtgagacatggagtcaaaggagatcattttggagctttaagatttgactgccctgctggattttggacttgcatggggcccataacccctttgttttggccagtgtctcccatttggaatggttgtatttactcaatgcctctactcccattgtatctaagaagtagctaacttgcttttgattttacaggctcatagacaaaagggacttgccttgtctc-------agatgagactttggactgtggacttctgagttaatgctgaaatgagttgagactttggggaactgttgggagggcatgatcagttctgaaatgtgaggacatgagatttgagaagggtcaggaatggaatgatatggtttgacattgcccccacccaaatctcatcttgaattgtacctctcacaattcccatgtg--------------ttgtggaaggtaattgaatcatgggggcgggtctttcctgtgctgttcttatggtgctgaataagtctcatgcaagctgatggttttaa s panTro4.chr21 3717890 1301 + 32799110 gggaaacagagcataaaagtttggaaaatttgcagcctgacaatgtgatagaaaagaaaatctcattttctga-gaagaaatccaagctggatgcagaaatttgcataagtgacacggagccgaatgttaatccccaagacaatggggaaaatatctccagggcgtatcagaggctgtcatggcagctcttcccatcacaggcccagaggtctaggaggaaaaggtggttttgtttccagccccagggtccccatgctgtgtgcagcatagggacttggtgccctgtgtcccagctgctccagccgtggctgacaggggccaatgtagagctcaagctgcagcttcagagggtgcaagcc----tcaagacttggcagcttatacatgatgttgagcctgccaatgcacagaagtcaagaattgggctttgggaccctccgcctaaatttcagaggttgtatggaagtgcctggatgttcaggcagaagtttgctgcaggggtggcactttcatggagaacctctgctagggcagtgcacaagggaaatgtggggttggaacccccaaacagagctcctacttgggcactgcctagtggagctgcgagaagaaggccaccatcttccagaccctagaatggcagatccaccaacagcttgcaccgtgcacctggaaaagccgcagagactcaatgccaacccatgaaatcagcctggaaggaggctgta-cctgcaaagccacaggaatggagctgctcaaggccatgggaacccaccacttgcatcagtgtgacctggatgtgagacatggagtcaaaggagatcattttggagctttaaaatttgactgccctgctgaattttggacttgcatggggcccataacccctttgttttggccagtgtctcccatttggaatggctgtatttactcaatgcctctactcccattgtatctaagaagtagctaacttgcttttgattttacaggctcataggcaaaagggacttgccttgtctc-------agatgagactttggactgtggacttctgagttaatgctgaaatgagttgagattttgggggactgttgggagggcatgatcagttctgaaatgtgaggacttgagatttgagaggggtcaggaatggaatgatatggtttgacattgcccccacccaaatctcatcttgaattgtaactctcacaattcccatgtg--------------ttgtggaaggtaattgaatcatgggggcgggtctttcctgtgctgttcttatggtgctgagtaagtctcatgcaagctgatggttttaa i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16980851 1315 + 48394510 gggacacagggcataaaagtttggaaaatttgcagcctgatgatgtgatagaaaagaaaatctcattttctga-gaagaaatccaagctggatgcagaaatttgcataagtgacacagagcccaatgttaatccccaagacaatggggaaaatatgtccagggcgcatcagaggctgtcatggcagctcttcccatcacaggcccagaggcctaggaggaaaaagtggttttgttgctggccccagggtccccatgttgcgtgcagcatagggacttggtggcctgtgttccagctgctccagccatggctgacaggggccaatgtagagctcaggctgcagcttcagagagtgcaagcc----tcaagacttggcagcttacacatggtgttgagcctgccagtgcacagaagtcaagaattgggctttgggaccctccgcctaaatttcagatgttgtatggaagtgcctggatgttcaggcagaagtttgctgcaggggtggcactttcatggagaacctctgctagggcagtgcacaagggaaatgtggggtcagaacccccacacagagtccctacttgggcactgcctagtggagctgcaagaagaaggccaccatcctccagaccctagaatggtagatccaccaacagcttgcaccgtgcacctggaaaagctgcagagactcaatgccaaaccatgaaagcagcctggaaggaggctgtaccctgcaaagccacaggaatggagctgctcaaggccatgggaacccaccacttgcatcagcatgacctggatgtgagacatggagtcaaaggagatcattttggggccttaagatttgactgccctgctggattttggacttgcatggggcccataacccctttgttttggccaatgtctcccatttggaatggctgtatttactcagtgcctctactcccattgtatctaagaagtagctaacttgcttttgattttacaggcctataggcaaaagggacttgccttgtctc-------ggatgagactttggactgtggacttttgagttaatgctgaaatgagttgagactttgggggactgttgggagggcatgatcagttctgaaatgtgaggacatgagatttgggaggggccaggaatggaatgatatggtttgacgttgcccccacccaaatctcatcttgaattgtaactctcacagttcccatgtg-tgtggaaggaacctggtgggaggtaattgaatcatgggggcaggtctttcctgtgctgttcttatggtgctgaataagtctcatgcaagctgatggttttaa i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4477861 1314 + 32716333 gggaaacagagcataaaagtttggaaaatttgcagcctgacaacgtgatagaaaagaaaatctcattttctga-gaagaaatccaagctgaatgcacaaatttgcacaagtgacagggagccaaatgttaatccccaagacaatggggaaaatatctccaggccatatcagaggctgtcatggcagctcttcccatca-aggcccagaggcctaggaggaaaaagttgttttgttgccagccccagggtccccatgctgtgtgcagcatacggacttggtgccctgtgtcccagctgctccagccgtggctgacaggggcgaatgtagagctcaggctgcagcttcagagggtgcaagcc----ttaagacttggcagcttacacatggtgttgagcctgccagtgcacagaagtcaagaattgggctttgggaccctccgcctaaatttcagaggttgtatggaagtgcctggatgttcaggcagaagtttgctgcaggggtggcactttcatggagaacctctgctagggcagtgcacaagggaaatgtggggtctgaacccccatgcagtgtccctacttgggcactgcctggtggagctgcgagaagaaggccaccatcctccagaccctagaatggtagatccaccaacagcttgcaccgtgcacctggaaaagccgcagagactcaatgccaacccatgaaagcag-ctggaaggaggctgtaccctgcaaagccacaggaatggagctgctcaaggccatgggaacccaccacttgtatcagcatgacctggatgtgagacttggagtcaaaggaaatcattttggagctttaagatttgactgccctgctggattttggacttgcatggggcccataacccctttgttttggccaatgtctcccatttggaatggctgtatttactcaatgcctctacccccattgtatctaagaagtagctaacttgcttttgattttacaggctcataggcaaaagggacttgccttgtctc-------agatgagactttggactgtggacttctgagttaatgctgaaatgagttgagacttcgggggactgttgggagggcatgatcagttctgaaatgtgaggacatgagatttgggaggggccaggaatggaatgatatggtttgatgtcgcccccacccaaatctcatcttgaattgtaactctcacaattcccatgtgttgtggaaggaacctggtgggaggtaattgaatcatgggggcgggtctttcccgtgctgttcttatggtgctgaataagtcttatgcaagctgatggtttaaa i nomLeu3.chr25 C 0 M 128 s rheMac3.chr3 168593396 1316 - 198365852 cggaaactgagcataaaagtttggaaattttgcagcctgacaatgtgatagaaaataaaatcccattttctga-ggagaaatccaagctggctgcagaaatttgcgtaagtgacaaggagccgaatgttaatccccaatacaatggggaaaatatctccagggcatatcagaggctgtcacagctgctcttcccatcacaggcccagaggcctaggaggaaaaagtggttttgttgccagccccagggtccccatgctgtgtgcagcataggaacttgatgccctgtgtcccagctgctccagccatggctgaaaggggccaacatagagctcaggctgcagcttcagagggtacaagcctcaatcaagacttggcagcttccacatggtattgagcctgccagtgcacagaagtcaagaattggggtttgggaccctctgcctaaatttcagaggttgtatagaagtgcctagatattcaggcagaagtttgctataggggtggcactttcatggagaacccctgctagggcagtgcacaagggaaatgtggggtcggaacccccacacagagtccctacttgggcactgcctagtggagctgccagaagaaggccaccatcctccagaccctagaatggtagatccaccaacagcctgtaccttgaatctggaaaatccgcagagactcaatgccaacccatgaaagcagcctggagggaggctgtaccctgcaaagccacagggatggagctgctcaaggccatgggtacccaccacttgcatcactgtgacctggatgtgagacatgtagtcaaaggagatcattttggagctttaagatttgactgccctgctggattttggacttgcatggggcccataacccctctgttttggccaatgtcttccatttgcaaaggctgtatttactcaatgcttctactcccattgtatctaagaagtagct-acttgcttttgattttacaggctcataggcagaagggacttgccttgtctc-------agatgagactttgggctgtggactttggagttaatgctgaaacgagttgagactttgggggactgttgggagggcatgatcagttctgaaatgtgaggacgtgagatttaggagaggccaggagTACA---atatggtttgaagttgcccccacccaaaacccatcttggattgtaactctcacaattcccatgtgttgtggaaggaacctagtgggaggtaattgaatcatgggggtaggcctttcccatgctgttttcatggtggtgaataagtctcatgagatcttatggttttag i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162257163 1316 - 192294377 cggaaactgagcataaaagtttggaaattttgcagcctgacaatgtgatagaaaataaaatcccattttctga-ggagaaatccaagctggctgcagaaatttgcgtaagtgacaaggagccgaatgttaatccccaatacaatggggaaaatatctccagggcatatcagaggctgtcacagctgctcttcccatcacaggcccagaggcctaggaggaaaaagtggttttgttgccagccccagggtccccatgctgtgtgcagcataggaacttggtgccctgtgtcccagctgctccagccatggctgaaaggggccaacatagagctcaggctgcagcttcagaggttacaagcctcaatcaagacttggcagcttccacatggtattgagcctgccagtgcacagaagtcaagaattggggtttgggaccctctgcctaaatttcagaggttgtatggaagtgcctagatattcaggcagaagtttgctataggggtggcactttcatggagaacccctgctagggcagtgcacaagggaaatgtggggtcggaacccccacacagagtccctacttgggcactgcctagtggagctgccagaagaaggccactatcctccagaccctaggatggtagatccaccaacagcctgtaccttgaatctggaaaatccgcagagactcaatgccaacccatgaaagcagcctggagggaggctgtaccctgcaaagccacagggatggagctgctcaaggccatgggtacccaccacttgcatcactgtgacctggatgtgagacatgtagtcaaaggagatcattttggagctttaagatttgactgccctgctggattttggacttgcatggggcccataacccctctgttttggccaatgtcttccatttgcaaaggctgtatttactcaatgcttctactcccattgtatctaagaagtagct-acttgcttttgattttacaggctcataggcagaagggacttgccttgtctc-------agatgagactttgggctgtggactttggagttaatgctgaaacgagttgagactttgggggactgttgggagggcatgatcagttctgaaatgtgaggacgtgagatttgggagaggccaggagTACA---atatggtttgaagttgcccccacccaaaacccatcttggattgtaactctcacaattcctatgtgttgtggaaggaacctagtgggaggtaattgaatcatgggggtaggcctttcccatgctgttttcatggtggtgaataagtctcatgagatcttatggttttag i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150953135 1319 - 180432695 gggaaacagagcataaaagtttggaaattttgcagcctgacaatgtgatagaaaagaaaatctcattttctga-ggagaaatccaagctagctgcagaaatttgcataagtgataaggagccgaatgttaatccccaatacaatgaggaaaatatctccagggcatatcagaggcTGTCACAGTTGCTCTTCCCATcgcaggcccagaggcctaggaggaaaaagtggttttgttgCCAgccccagggtccccatgctgtgtgcagcatagggacttggtgccctgtgtcccagctgctccagccgtggctgaaaggggccaatgtagagctcaggctgcagcttcagagggtacaagcctcAATCaagacttggcagcttccatgtggtattgagcctgccagtgcacagaagtcaagaattggggtttggga-cctctgcctaaatttcagaggtTGTATGGAAGTGCCTAGATattcaggcagaagtttgctgcaggggtagcactttcatggagaacctctgttagggcagtgcacaagggaaatgtggggtcggaacccccacacagagtccctacttgggcactgcctagtggagctgccagaagaaggccaccatcctccagaccctagaatggtagatccaccaacagcttgtaccTTGAATCTGGAAAAGCCGCAGAGACTCAATGCCAACTCATGAAAGCAGcctggagggaggctgtaccctgcaaagccacagggatggagctgctCAAGGCCATGAGTACCCACCACTTGCATCactgtgacctggatgtgagacatgtagtcaaaggagatcattttggagcttgaagatttgactgccctgctggattttggacttgcatggggcccaTAACCTCTGTGTTTTGGCCAAcgtctcccatttggaatggctgtatttactcaatgcctctactcccattgtatctaagaagtagctaacttgcttttgattttacaggctcataggcagaagggacttgccttgtctc-------agatgagactttggactgtggactttggagttaatgctgaaacgagttgagactttgggggactgctgggaGGGCATGATCAGttctgaaatgtgaggacatgagatttgggagaagcCAAGAGTAGAATGATACGGTTTGACGTTGCCCCCATCCAAAACCCATCTTGGATTGTAACTCTCAcaattcccatgtgctgtggaAGGAACCTAGTggaaagtaattgaatcatgggggtaggcctttcccatgctgttttcatggtggtgaataagtctcatgagatctgatggttttaa i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15042429 1320 - 90373283 gggaaacagagcataaaagtttggaaattttgcagcctgacaatgtgatagaaaagaaaatcccattttctga-gaagaaatccaagctagctgcagaaatttgcataagtgacaaggagccgaatgttaatccccaatacaatgaggaaaatatctccaggtcatatcagaggctgtcacaactgctcttcccatcacaggcccagaggcctaggaggaaaaagtggttttcttgccagccccagggtccccatgctgtgtgcagcatagggacttggtgccctgtgtcccagctgctccagccgtggctgaaaggggccaatgtagagctcaggctgcagcttcagagggtacaagcctcaatcaagacttggcagcttccatgtggtattgagcctgccagtgcacagaagtcaagaattcgggtttgggaccctctgcctaaatttcagaggttgtatggaagtgcctagatattcaggcagaagtatgctgcaggggtggcactttcatggagaacctctgttaaggcagtgcacaagggaaatgtggggtcagaacccccacacagagtccctacttgggcactgcctagtggagctgccagaagaaggccaccatcctccagaccctagaatggtagatccaccaacagcttgtaccttgaatctgaaaaagccacagagactcaatgccaacccatgaaagcagcctgcagggaggctgtaccctgcaaagccacagggatggagctgctcaaggccatgggtgcccaccacttgcatcactgtgacctggatgtgagacatgtagtcaaaggagatcattttggagctttaagatttgactgccctgctggattttggacttgcatggggcccataacccctgtgttttggccaatgtctcccatttggaatggctgtatttactcaatgcctctactcccattgtatctaagaagtagctaacttgcttttgatttgacaggctcatagacagaaaggacttgccttgtctc-------agatgagactttggactgtggactttggagttaatgctgaaacgagttgagactttgggggactattgggagggcatgatcagttctgaaatgtgaggacatgagatttgggaggagccaagagtagaatgatatggtttgacgttgcccccacccaaaacccatcttggattgtaactcttacaattcccatgtgctgtggaaggaacctagtggaaagtaattgaatcatgggggtagacctttcccatgctgttttcatggtggtgaataagtctcatgagatctaatggttttaa i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21941573 1315 + 50472720 gggaaacggagcataaaagttcagaaaatttgcagcctgacaatgtgatagaaaagaaaatcccattttctgagggagaaattcaagcaagctgcagaaatttgcgtaagtgatgaagagccaaatgttaacccccaagacaatggggaaaatgtctccagggcatgtcagagtc------agcagctcttcccatcacaggcccagaggcctaaaaggaaaaagtggtttcattgccgggcctaggatccccattctatgtgcagcaaaggaacatgatgctctctgtcccagctgctccaaccatggctgaaaggggccaatgtagagctcaggccatggcttcggagggtgcaagct----gcaagacttggctgcttccacatggtattgagcctgccagtgcacggaagtcaagacttggggtttgggactctctgcctagatttcagaggttgtatggaaatgcctggatctccaggcagaagtttgctgca-gggtggaactctcatggagaacctctgctaggacagtgcacaagggaaatgtagggttggagcccccacacagagtccctaggtgggcacagcatactggagctgtgagaaggccgccaccatcctccagaccctaaaatggtagatccaccaacaacttgcactgtttacctggaaaagctgcagacactcaatgccaacccatgaaagcagcctggagggaagctgtaccctgcaaagccacagggatggagctgctcaagaccataggaacccaacacttgcatcagcacgaactggatgtgagacacatagtcaaaggagatcattttggagctttaagatttgactgccctgctggatttcagacttgcatgggacccatcacccctttgttttggccaatgtctcccatttgcaatggctgtatttacccagtgcctctacccccattgtatctaagaagtaactaacttgcttttgattttagaggctcataggcagaagggacttgccttgtctctttgacaaaatgcgactttggat--tggacttttgagttagtgttgaaatgagttgagaccttgggtgactgttgggagggcatgatttgttctaaaatgtgatgatatgagatttggaaggagccaggagtggaatgatatggtttgacagtgcccccacccaaatctcatcttgaattgtagctctcagaattcccatgtgttgtgggaggaagctggttggaggtgattgaatcatgggggcaggtctttcccatgctgttctcatggtggtgagtaagtctcatgagatctagtagttttaa i calJac3.chr21 I 436 C 0 e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I a score=201401.000000 s hg38.chr21_KI270874v1_alt 105658 87 + 166743 aaacaggagtttccccatacaagctctctctttttgcctgctgccatccatgtaagatgtgacttaatcctccttgccatccaccat s panTro4.chr21 3719191 86 + 32799110 aaacaggagtttcccca-acaagctctctctttttgcctgctgccatccatgtaagatgtgacttactcctccttgccatccaccat i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16982166 87 + 48394510 aaacaggagtttccccatgcaagctctctctttttgcctgctgccatccatgtaagatgtgacttactcctccttgccatccaccat i ponAbe2.chr21 C 0 C 0 s rheMac3.chr3 168594712 86 - 198365852 aaacaggagtttcccaa-acaagctctctctttttgcctgctgccatccatgtaagatgtgacttactcctccttgccttccaccat i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162258479 86 - 192294377 aaacaggagtttcccaa-acaagctctctctttttgcctgctgccatccatgtaagatgtgacttactcctcctcgccttccaccat i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150954454 86 - 180432695 aaacaggagtttcccaa-acaagctctctctttttgcctgctgccatccatgtaagatgtgacttactcctccttgccttccaccat i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15043749 86 - 90373283 aaacaggagtttcccaa-acaagctctctctttttgcctgctgccatccatgtaagatgtgacttactcctccttgccttccatcat i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21942888 83 + 50472720 aaacaggagtttctctgcacaag----ccctttttgcctgctgccatccatgtaagatgtgacttattcctccttgccttccatcat i calJac3.chr21 C 0 C 0 e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e nomLeu3.chr25 4479175 128 + 32716333 M a score=587382.000000 s hg38.chr21_KI270874v1_alt 105745 200 + 166743 gattgtgaggcctcctcagccacatggaactggtagtccattaaacctctttcttttgtaaatagcctagtcttgggtttgtctttatcagcagcatgaatacaCCCCTTTACTTGAAGATGATGCAGAGACTTCTGCCTTTCAAGATAGCACATCTCCCTCTGAAGATTCATCTCAACCTTTGCTTGGAGCATCTGGtg s panTro4.chr21 3719277 200 + 32799110 gattgtgaggcctccccagccatgtggaactggtagtccattaaacctctttcttttgtaaatagcccagtcttgggtatgtctttatcagcagcatgaatacaCCCCTTTACTTGAAGATGATGCAGAGACTCCTGCCTTTCAAGATAGCACATCTCCCTCTGAAGATTCATCCCAACATTTGCTTGGAGCATCTGGtg i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16982253 200 + 48394510 gattgtgaggcctccccagccatatggaactgttggtccattaaacctctttcttttgtaaatagcccagtcttgggtatgtctttatcagcagcatgaatacaCCCCTTTACTTAAAGATGATGCAGAGATTTCTGCCTTTCAAGACAGCACATCTCCCTCTGAGGATTCATCCCAACCTTTGCTTGGAGTATCTGGtg i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4479303 199 + 32716333 gattgtgaggcctccccagccatgtggaactgttagtccatgaaacctctttcttttgtaaatagcccaagctcCAATGTGGTGGAATTC-CAACATGATTACACCCCTTTACTTGAAGATGATGCAGAGACTTCTGCCTTTCGAGATAGCACATCTCCCTCTGAAGATTCATCCCAACCTTTTCTTGGAGCATCTGGTG i nomLeu3.chr25 M 128 C 0 s rheMac3.chr3 168594798 200 - 198365852 gattgtgaggcctccccagtcatgtggaactgttagtccattaaacctctttcttttgtaaatagcccagtcttgggtatgtctttatcagcagcataaatacaCCCCTTTACTTGAAGATGATGCAGAGACTTCTGCCTTTCAAGATAACACATCTCCCTCTGAAGATCCACCCCAACCTTTGCTTGGAGCATCTGGTG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162258565 200 - 192294377 gattgtgaggcctccccagtcatgtggaactgttagtccattaaacctctttcttttgtaaatagcccagtcttgggtatgtctttatcagcagcatgaatacaCCCCTTTACTTGAAGATGATGCAGAGACTTCTGCCTTTCAAGATAACACATCTCCCTCTGAAGATCCACCCCAACCTTTGCTTGGAGCATCTGGtg i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150954540 200 - 180432695 gattgtgaggcctccccagtcatgtggaaatgttagtccattaaacctctttcttttgtaaatagcccagtcttgggtatgtctttatcagcagcatgaataTGCCCTTTTACTTGAAGATGATGCAGAGACTTCTGCCTTTCAAGATAACACATCTCCCTCTGAAGATCCACCCCAACCTTTGCTTGGAGCATCTGGTG i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15043835 200 - 90373283 gattgtgaggcctccccagtcatgtggaactgttagtccattaaacctctttcttttgtaaatagcccagtcttgggtatgtctttatcagcagcatgaATACGCCCCTTTACTTGAAGATGATGCAGAGACTTCTGCCTTTCAAGATAACACATCTCCCTCTGAAGATCCACCCCAACCTTTGCTTGGAGCATCTGGtg i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21942971 199 + 50472720 gattgtgaggcctccccagccatgcggaattcttagtctattaaacttctttcttttgtaaattcccctgtctt-ggtatgtctttatctatagcatgaATATACCCTTTCACCTGAAGATGATGCAGAGACTTCTCCCTTTCAAGGCAACACACCTCCCTCTGAAGATTCACCCCAACCTTTGCTAGAAGCAACTGGtg i calJac3.chr21 C 0 C 0 e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I a score=1562730.000000 s hg38.chr21_KI270874v1_alt 105945 474 + 166743 actgaagaagaggcca--aatccatgaat-aatcattatacaatgagtgggcaacattatatggtgatgattcaaccagtccttcttcacagaaacctatgaccatttactcaggtaatcataaactgg---agatagagaatacacaaaaattttaaggtcacattgattatacagaaactcaaaattattcagaactccatgtcagagtggaggtagatggtaataaatatattcatttggtctagtttacaatggatgcaacaggg--catggaacaacccagtaagtccttcctctatctttcacattctattggaagagacatatttagtagttgtctgacatctt--cccaaccccaggatttttgcttggcatttggaggcaagagatatcacgggaaagacaaagtggatacttctgTCCAGATATGACAATAAGTAGTTAGGCTGCTGGATagcctaagaagaaaatgataacca s panTro4.chr21 3719477 474 + 32799110 actgaagaagaggcca--aatccatgaat-aatcattatacaatgagtaggcaacattatatggtgatgattcaaccagtccttcttcacagaaacctctgaccatttactcaggtaatcataaactgg---agaaagagaatacacaaaaattttaaggtcacattgattatacagaaactcaaaattattcagaactccatgtcagagtggaagtacatggtaataaatatattcatttggtctactttacaatggatgcaacatgg--catgggacaacccagtaagcccctcctctatctttcacattctattggaagagacatatttagtagttgtctgacatctt--cccaaccccaggattgttgcttggcctttggaggcaagagatatcacgggaaagacaaagtggatacttctgTCCAGATATGACAATAAGTAGTTAGGCTGCTGGATagcctaagaagaaaatgataacca i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16982453 474 + 48394510 actgaagaagaggcca--aatccatgaat-aatcattatacaatgagtgggcaacactatatggtgatgattcaaccagtccctcttcacagaaacctatgaccacttactcaggtaatcataaactgg---agaaagagaatacacaaaaattttaagatcatattgATTATATAGAAACTCAAAATTATTCAGAACTCCATGTCAGAGTGGAGGTACATGGTAATGAATATATTCATTTGGTCTAGTTTACAATGGATGCAACAGGG--CGTGGAACAACCCAGTAAGCCCTTCCTCTATCTTTCACATTCTattggaagagacatatttagtagttgtctgacatctt--cccaaccccaggattgttgcttggcctttggaggcaagagatatcacaggaaagacaaagtggatacttctgTCCAGATATGACAATAAGTAGTTAGGCCGCTGGATAGCCTAAGAAGAAAATGATAACCA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4479502 474 + 32716333 ACTGAAGAAGAGGCCA--AATCCATGAAT-AATCATTATACAATGAGTGGGCAACATTATATGgtaatgattcaatcagtcctccttcacagaaacctatgaccatttactcaggtaatcataaactgg---agaaagagaatacacaataattttaaggTCACATTGATTATACAGAAACTCAAAATTATTCAGAACTCCATGTCAGAGTGGAGGTACATGGTAATAAATATATTCATTTGGTCTAGTTTACAATGGATGCAACAGGG--CATGGAACAACCCAGTAAGCCCCTCCTCTATCTTTCACATTCTATTGGAAGAGACATATTTAGTAGATGTCTGACATCTT--CCCAACCCCAGGATTGTTGcttggcctttggaggcaagagatatcacaggaaagacaaagtggatacttctgTCCAGATATGACAATAAGTAGTTAGGCTGCTGGATAGCCTAAGAAGAAAATGATAACCA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168594998 472 - 198365852 ACTGAAAAAGAGGCCA--AATCCATGAAT-AATCATTATACAATGGATAAGCAACATTATATGGTGATTATTCAACCAGCccttcttcacagaaacctatgaccatttactcaggtaatcataaactgg---agaaagagaatacacaaaaatttt-TGGTCACATTGATTATACAGAAACTTAGAATTATTCAGCACTCCATGTCAGAGCAGAGGTACATGGTAATAAATATATTCATTTGGTCTAGTTTACAACGGATGCAACA-GG--CATGGAACAACCCAGTAAGCCCTTCCTCTATCTTTCAGTTTCTattggaatagacatatttagtagttgtctgacatctt--cccaaccccaggtttgttgcttgaccttcgggggcaagagatatcatgggaaagacaaagtggaTACTTCTGTCCAGATATGGCAATAACTAGTTAGGCTGCTGGACAGCCTAGGAAGATAACGATAATCA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162258765 472 - 192294377 actgaaaaagagtcca--aatccatgaat-aatcattatacaatggataagcaacattatatggtgatgattcaaccagcccttcttcacagaaacctatgaccatttactcaggtaatcataaactgg---agaaagagaatacacaaaaatttt-tggtcacatcgattatacagaaacttagaattattcagcactccatgtcagagcagaggtacatggtaataaatatattcatttggtctagtttacaacggatgcaaca-gg--catggaacaacccagtaagcccttcctctatctttcagtttctattggaatagacatatttagtagttgtctgacatctt--cccaaccccaggtttgttgcttgaccttcgggggcaagagatatcatgggaaagacaaagtggatacttctgTCCAGATATGGCAATAACTAGTTAGGCTGCTGGACAGCCTAGGAAGATAACGATAATCA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150954740 472 - 180432695 ACTGAAAAAGAGGCCA--AATCCATGAAT-AATCATTATACAATGGATAAGCAACATTATATGGTGATGATTCAACCAGCCCTTCTTCACAGAAACCTATGATCATTTACTCAGGTAATCATAAACTAG---AGAAAGAGAATACACAAAAATTTT-TGGTCACATCGATTATACAGAAACTCAGAATTATTCAGAACTCCACGTCAGAGCAGAAGTACAtggtaataaatatattcatttggtCTAGTTTACAACGGATGCAACA-GG--CATGGAACAACCCAGTAAGCCCTTCCTCTATCTTTCACTTTCTATTGGAATAGACATATTTAGTAGTTGTCTGACATCTT--CCCAACCCCAGGTTTGTTGCTTGACCTTCGGCGGCAAGAGATATCATGGGAAAGACAAAGTGGATACTTCTGTCCAGATATGGCAATAACTAGTTAGGCTGCTGGACAGCCTAGGAAGATAATGATAATCA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15044035 473 - 90373283 actgaaaaagaggcca--aatccatgaat-aatcattatacaatggataagcaacattatatggtgatgattcaaccagcccttcttcacagaaacctatgaccatttactcaggtaatcataaactgg---agaaagagaatacacaaaaattttaaggtcacattgattatacagaaactcagaattattcagaactccatgtcagagcagaggtacatggtaataaatatattcattgggtctagtttacaatggatgcaaca-gg--catggaacaacccagtaagcccttcctctatctttcactttctattggaatagacatatttagtagttgtctgacatctt--cccaactctaggtttgttgcttgaccttcgggggcaagagatatcatgggaaagacaaagtggatacttctgTCCAGATATGCCAATAAGTAGTTAGGCTGCTGAACAGCCTAAGAAGAAAACGATAACCA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21943170 474 + 50472720 actgatgaagataccaagaatccatgagt-agtcactgtacaatgaatgggcaaaattacatggtgatgattcaaccagtccttcttcacagaaacctatgaccatttactcaggtaatcaaaaactgg---agaaagaaaaatcacaaaatttttaaggtcatattgATCATCCAGAAACTCAAAATCAACCAGAGCTCCATGTCAGAGTGGAGGTACATGGTAATAAATACATTCATTTGGTCTAGTTTACAATGGATGCAACAGGG--CACGGAACAACCCAGTAAGCCCTTCCTCTGTCTTTCACACTCTATTGAAGTAGACATATGTAGTAGTTATCTGATATCTC--CCCAACCCCAGGTTTGTTGCTTGGCCTTTGGAGGCAAGAGATACCATAGGAA--ACAAAGTGGATACTTCTGTCCAGATACAACAATAAGTAGTTAGGCTGTTGGATGGATTAAGAAGAAAATGAGAGTGA i calJac3.chr21 C 0 C 0 s canFam3.chr31 13837406 466 + 39895921 ACTGAAGAAGAGGTCAAGAATCTATGAGGAAATCACCGTGCAATGCCAAGGCAACATTATATAgtaataattcaaccag---ttcttcacagaaatctacgcgcgttttctcaggtaattatacactggaaaaaaaagagaattcctagaaatgtcaaggTCATATTTATTATTCAGGAATGCAAATTCATCCAATACTCCATGCCTGAGTGAGCTCACACAGTAATAA----ATTCACTAGATATAGTTAACACTGGGTGCAAAG-GGATCCTCAAGCAACTcagtaatcatttcct-tacccttcattttatattagagtagacatacttggtatttaggaaacaccctacccctactccaggttggtgatttggactttggaagtaagaacca--atgggaaagaccaagtggatacctctgTCCAGATTTCACTATAGGTAGTTAGGGGGCTGCCTGTCCTAAGAAGGACGTg------- i canFam3.chr31 I 553 C 0 e mm10.chr16 78134314 752 + 98207768 I a score=1500.000000 s hg38.chr21_KI270874v1_alt 106419 1 + 166743 g s panTro4.chr21 3719951 1 + 32799110 g i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16982927 1 + 48394510 G i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4479976 1 + 32716333 G i nomLeu3.chr25 C 0 C 0 s papAnu2.chr3 150955212 1 - 180432695 G i papAnu2.chr3 C 0 C 0 s calJac3.chr21 21943644 1 + 50472720 G i calJac3.chr21 C 0 C 0 e canFam3.chr31 13837872 0 + 39895921 C e mm10.chr16 78134314 752 + 98207768 I e rheMac3.chr3 168595470 0 - 198365852 C e chlSab2.chr2 15044508 0 - 90373283 C e macFas5.chr3 162259237 0 - 192294377 C a score=125060.000000 s hg38.chr21_KI270874v1_alt 106420 131 + 166743 cagctcat-agcccacaggggtgagggtcaagatcacccactggattagccacctaggctagcaaaggtgctaaccaagagtgaagagaatcttgaatgggtagaagagaaataagagaataagtatcagtt s panTro4.chr21 3719952 131 + 32799110 cagctcat-agcccccaggggtgagggtcaagatcacccactggattagccacctaggctagcaaaggtgctaaccaagagtgaagagaatcttgaatgggtagaagagaaataagagagtaagtatcagtt i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16982928 127 + 48394510 CAGCTCAT-AGCCCCCAGGGGTGAGGGTCAAGATCACCCACCGGATTAGCCACCTAAGCTAGCAAAGGTGCTAACCAAGAGTGAAGAGAATCTTGAATGGGTAGAAGAGAAGTAAGACAA----TATCAGTT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4479977 131 + 32716333 TAGCTCAT-AGCCCCCAGGGGTGAGGGTCAAGATCACCCACTGGATTAGCCACCTAGGCTAGCAAAGGTGCTAACCAAGAGTGAAGAGAATCTTGAATGAGTAGAAGAGAAATAAGATAATAAGTATCAGTT i nomLeu3.chr25 C 0 C 0 s calJac3.chr21 21943645 132 + 50472720 CAACTCATaaacccccaggggaaagggtcaagaccacccactggattagccacctaggctagcaaagatgctagccaagagtgaagagaatcttgattgcagaaaagagaaataagacaataagtatcagtt i calJac3.chr21 C 0 C 0 s canFam3.chr31 13837872 94 + 39895921 --------------------------gtccggattacccatttgataaaccatctagaccagca------------aaaagtgaagagaatctagaatgggtagaagatgagtagaacattaagtatcagtt i canFam3.chr31 C 0 C 0 e mm10.chr16 78134314 752 + 98207768 I e rheMac3.chr3 168595470 0 - 198365852 C e chlSab2.chr2 15044508 0 - 90373283 C e macFas5.chr3 162259237 0 - 192294377 C e papAnu2.chr3 150955213 0 - 180432695 C a score=3600.000000 s hg38.chr21_KI270874v1_alt 106551 1 + 166743 g s panTro4.chr21 3720083 1 + 32799110 g i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16983055 1 + 48394510 G i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4480108 1 + 32716333 G i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168595470 1 - 198365852 G i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162259237 1 - 192294377 G i macFas5.chr3 C 0 C 0 s chlSab2.chr2 15044508 1 - 90373283 G i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21943777 1 + 50472720 g i calJac3.chr21 C 0 C 0 s canFam3.chr31 13837966 1 + 39895921 g i canFam3.chr31 C 0 C 0 e mm10.chr16 78134314 752 + 98207768 I e papAnu2.chr3 150955213 0 - 180432695 C a score=186263.000000 s hg38.chr21_KI270874v1_alt 106552 57 + 166743 cagcctccagacaagctattgcagcatcagggctatTTTCAactacatatttaa--atg s panTro4.chr21 3720084 57 + 32799110 cagcctccagacaagctattgcagcatcagggctatTTTCAactacatatttaa--gtg i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16983056 54 + 48394510 CAGCCTCCAGACAAGC---TGCAGCATCAGGGCTATTTTCAactacatatttaa--atg i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4480109 54 + 32716333 CAGCCTCCAGACAAGC---TGCAGCATCAGGGCTATTTTCAactacatatttaa--atg i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168595471 54 - 198365852 CAGCCTCCAGACAAGC---TGCAGCATCAGGGCTATTTTCAactgcatatttaa--atg i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162259238 54 - 192294377 CAGCCTCCAGACAAGC---TGCAGCATCAGGGCTATTTTCAactgcatatttaa--atg i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150955213 54 - 180432695 CAACCTCCAGACAAGC---TGCAGCATCAGGGCTATTTTCAACTGAATATTTAA--ATG i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15044509 54 - 90373283 CAGCCTCCAGACAAGC---TGCAGCATCAGGGCTATTTTCAactgcatatttaa--atg i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21943778 56 + 50472720 cagcctccagacaagc---tgCAGCATCAAGCCTATTTTCAACTACATTTTTAAATATG i calJac3.chr21 C 0 C 0 s canFam3.chr31 13837967 54 + 39895921 tagtatcaaaaccagc---tgcagcactggggTTTTTTCTGATTACATATTTAA--ATG i canFam3.chr31 C 0 I 117 e mm10.chr16 78134314 752 + 98207768 I a score=336193.000000 s hg38.chr21_KI270874v1_alt 106609 108 + 166743 taat-ggcttggatatagtgtgttaaagaaaatatattattaattttaac-t-----tttttgatgtggtgatttgaaactttaaaataatatatgtatcatggttgtggcttcc s panTro4.chr21 3720141 108 + 32799110 taat-ggcttggatatagtgtgttaaagaaaatatattattaattttaac-t-----tttttaatgtggcgacttgaaactttaaaataatatatggatcatggttgtggcttcc i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16983110 108 + 48394510 taat-ggtttggatatagtgtgttaaagaaaatatattattaactttaac-t-----tttttaatgtggtgacttgaaactttaaaataatatatggatcatggttgtggcttcc i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4480163 108 + 32716333 taat-ggcttggatatactgtgttaaagaaaacatattattaattttaac-t-----tttttaatgtggtgacttgaaactttaaaagaatatatggatcatggttgtggcttcc i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168595525 105 - 198365852 tagt-ggtttggatatagtgtgttaaagaaaatatattattaattttaac-t-----tttttaatgtagtgacttgaaattttaa---aatatatggatcatgttcgtggcttgc i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162259292 105 - 192294377 tagt-ggtttggatatagtgtgttaaagaaaatatattattaattttaac-t-----tttttaatgtagtgacttgaaattttaa---aatatatggatcatgttcgtggcttgc i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150955267 105 - 180432695 TAGT-GGTTTGGATATAGtgtgttaaagaaaatatattattaattttaac-t-----tttttaatgtagtgacttgaaattttaa---aatatatggatCATGTTCGTGGCTTGC i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15044563 105 - 90373283 tggt-tgtttggatatactatgttaaagaaaatatattattaattttaac-t-----ttttaaatgtagtgacttgaaattttaa---aatatatggatcatgttcgtggcttgc i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21943834 110 + 50472720 TAGTGGGtttggacatattgtattaaagaaaatatattactaattttaactt-----tttttaatgtggtgacttcaaactttaaaataatacatggctcatgtttgtggcttgc i calJac3.chr21 C 0 C 0 s canFam3.chr31 13838138 113 + 39895921 caat-accttggatatatttcattaaagaaagtatatcattaaattaaat-ttttaatttttaatatggctacttgaaaatgtaaaacagcatgtgactcatatttgtggcttgc i canFam3.chr31 I 117 C 0 e mm10.chr16 78134314 752 + 98207768 I a score=4449851.000000 s hg38.chr21_KI270874v1_alt 106717 1129 + 166743 attacattcttattggacaAGTGTGCCCTATAATATCTACATATAACCAAAAT-------GTCATCTAAAACCT----CTAATAAAAATCCATCAGTTACTAAATACATGTTTTGTAGCTGACAGAGTAAGATCTATTCA--------------GGTGGCCACACTCTGCAGAAGAATAAACTACA--------CAATGCAAGCTAATGAGAATCTGAAAAAGGAAAACATCCTTTCAGCCAATTCCTTTCTCCCTCTTTAGAGGAATAGCATAAGTACTACCCGTGAAAC-AGGACAGAAAG--CTGCAGGAATATGATTATTT-ATAATTTTAAAAGATCATGAGACTCTGTCTTAGATGCTTTATCTGAACTC-------AAAACCTATATCCATATCACCACATCACACAACTATATCTGCAGCAGTTGAATCTGTTCAGATTGTAGAGGGTCCTGCAGAGCTGCATGCATGGAGAAAATGCATCCTAAAAGTGAGAGCTCACAGTAAGATATGATCATTACATTTTAGAAACAAAGTTTAAAATAAAGCAGTGACCACAATATTCAGTCATCCACCATAAAATTATGTGCAGTAATCTCCATTTCTGGATATGGATTGCTAAATAGCAATATATAAACAAACAATATCAAAGTGCCTTTTTGGCTAACTGCCACTCTGCCACTTCTGAACTGAAGCCAATT---ATGACATCACTCGAGCTTCTTGTCCTTTGCTGACCTTCCTACTCATGTTGCCAAAATGTATTAAATTTCTCCTCTACGATTTGTC--TTATTCCCTTTGTCTTTGTTTCTTTAAATAATGACTTGACATCACTTGACCTCAACCTACAATTTTGGCTGGTAATATCACTGAGCAATTCACTTACATAAATGGCTTTGCATAATCATCCATTGTGTCACAGAAAAATAATCGTGCAAGAAAAGGTTGAATTTGTATAATGTAGAACTGAAGAAAATTATTTT-AATATTCC-AAAAATCATACATCCATTTAGCAGGTAAGATGGAATATTCTATCAAGCTGTAAAAATCCAGTTTCCATGGTACTATAAT--TAATAAAATGTATAGTTAGTAAACCCATCTATGCATACTGTTTATTTTAGTATTGTTCAAGTG---AAAGTCACTCTGTCCATTAAATCAAAAATAAAAGTGAT s panTro4.chr21 3720249 1133 + 32799110 attacattcttattggacaAGTGTGCACTATAATATCTACATTTAACAAAAAT-------GTCATCTAAAACCT----CTAATAAAAATCCATCAGTTACTAAATACATGTTTTGTAGCTGACAGAGTAAGATCTATTCA--------------GGTGGCCACACTCTGCAGAAGAATAAAGTACA--------CAATGCAAGCTAATGAGAATCTGAAAAAGGAAAACATCCTTTCAGCCAATTCCCTTCTCCCTCTTTAGAGGAATAGCATAAGTACTACCCATGAAAC-AGGACAGAAAG--CTGCAGGAATATGATTATTT-ATAATTTTAAAAGATCATGAGACTCTGTCTTAGATGCTTTATCTGAACTC-------AAAACCTATATCCATATCACCACATCACACAACTATATCTGCAGCAGTTGAACCTGTTCAGATTGTAGAGGGTCCTGCAGAGCTGCATGCATGGAGAAAATGCATCCTAAAAGTGAGAGCTCACAGTAAGATATGATCATTACATTTTAGAAACAAAGTTTAAAATAAAGCAGTGACCACAATATTCAGTCATCCACCATAAAATTATGTGCAGTAATCTCCATTTCTGGATATGGATTGCTAAATAGCAATATATAAACAAACAATATCAAAGTGCCTTTTTGGCTAACTGCCACTCTGCCACTTCTGAACTGAAGCCAATTATAATGACATCACTCGAGCTTCTTGTCCTTTGCTGACCTTCCTACTCATGTTGCCAAAATGTATTAAATTTCTCCTCTACGATTTGTC--TTATTCCCTTTGTCTTTGTTTCTTTAAATAATGACTTGACATCACTTGACCTCAACCTACAATTTTGGCTGGTAATATCACTGAGCAATTCACTTACATAAATGGCTTTGCATAATCATCCATTGTGTCACAGAAAAATAATCGCGCAAGAAAAGGTTGAATTTGTATAATGTAGAACTAAAGAAAATTATTTT-AATATTCCAAAAAATCATACATCCATTTAGCAGGTAATATGGAATATTCTATCAAGCTGTAAAAATCCAGTTTCCATGGTACTATAAT--TAATAAAATGTATAGTTAGTAAACCCGTCTATGCATACTGTTTATTTTAGTATTGTTCAAGTG---AAAGTCACTCTGTCCATTAAATCAAAAATAAAAGTGAT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16983218 1131 + 48394510 attacattcttattggacaAGTGTGCACTATAATATCTACATATAACAAAAAT-------GTCTTCTAAAACCT----CTAATAAAAATCCATCAGTTGCTAAATACATGTTTTGTAGCTGACAAATTAAGATCTATTCA--------------GGTGGCCACACTCTGCAGAAGAACAAAGTACA--------CAATGCAAGCTAATGAGAATCTGAAAAAGGAAAACCT-CTTTCAGCCGATTCCCCTCTCCCTCTTTAGAAGAATAGCATAAGTACTACCCGTGAAGC-AGGACAGAAAG--CTGCAGGAATATGATTATTT-ATAATTTTAAAAGATCATGAGACTCTGTCTTAGATGCTTTATCTGAACTC-------AAAACCTATATCCATATCACCACATCACACAACTATATCTGCAGCAGTTGAACCTGTTCAGATTGTAGAGGGTCCTGCAGAGCTGCATGCATGGAGAAAATGCATCCTAAAAGTGAGAGCTCACAGTAAGATATGATCATTACATTTTAGAAACAAAGTTTAAAATAAAGCAGTGACCACAATATTCAGTCATCCACCATAAAATTATGTGCTGTAATCTCCATTTCTGGATACGGATTGCTAAATAGCAATATATAAACAAACAATATCAAAGTGCCTTTTTGGCTAACTGCCACTCTGCCACTTCTGAACTGAAGCCAATTATAATGACATCACTCGAGCTTCTTGTCCTTTGCTGACCTTCCTACTTATGTTGCCAAAATGTATTAAATTTCTCCTCTACAATTTGTC--TTATTCCCTTTGTCTTTGTTTCTTTAAATAATGACTTGACATCACTTGACCTCAACCTACAATTTTGGCTGGTAATATCACTGAGCAATTCACTTACATAAATGGCTTTGCATAATCATCCATTGTGTCACAGAAAAATAATCGCTAAAGAAAAGGTTGAATTTGTATAATGTGGAACTGAAGAAAATTATTTT-AATATTCC-AAAAATCATACATCCATTTAGCAGGTAAGATGGAATATTCTATCAAGCTGTAAAAATCCAGTTTCCATGGTACTATAAT--TAATAAAATTTATAGTTAGTAAACCCATCTATGCATACTGTTTATTTTAGTATTGTTTAAGTG---AAAGTCACTCTGTCCATTAAATCAAAAATAAAAGTGAT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4480271 1116 + 32716333 attacattcttattggacaAGTGTGCACTATAATATCTACATATAACAAAAAT-------TTCATCTAAAACCT----CTAATAAAAATCCATCAGTTGCTAAATACATGTTTTGTAGCTGACAGAGTAAGATCTATTCA--------------GGTGGCCACGCTCTGCAGAAGAATAAAGTACA--------CAATGCAAGCTAAGGAGAATCTGAAAAAGGAAAACATCCTTTCAGCCGATTCCCTGCTCCCTCTTTAGAGGAATAGCATAAGTACTACCCATGAA-C-AGGACAGAAAG--CTGCAGGAATATGATTATTT-ATAATTTTAAAAGTTCATGAGACTCTGTCTTAGATGCTTTATCTGAACTC-------AAAACCTATATCCACATCACCACATCCCACAACTATATCTGCAGCAGTTGAACCTGTTCAGATTGTAGAGGGTCCTGCAGAGCTGCATGCATGGAGAAAATGCATCCTAAAAGTGAGAGCTCACAGTAAGATACGATCATTACATTTTAGAAACAAAGTTTAAAATAAAGCAGTGACCACAATATTTGGTCATCCACCATAAAATTATGTGCCGTAATCTCCATTTCTGGATATGGAATGCTAAATAGCAATATATAAACAAACAATATCAAAGTGCCTTTTTGGCTAACTGCCACTCTGCCACTTCTGAACTGAAGCCAATTATAATGACATCACTCAAGCTTCTTGTCCTTTGCTGACCTTCCTACTTATGTTGCCAAAATGTATTAAATTTCTCCTCTACAATTTGTC--TTATTCCCTTTGTCTTTGTTTCTTTAAATAATGACTTGACATCACTTGACCTCAACCTACAATTTTGGCTGGTAATATCACTGAGCAATTCACTTACATAAATG---------------CCATTGTGTCACAGAAAAATAATCACGCAAGAAAAGGTTGAATTTGTATAATGTGGAACTGAAGAAAATTATTTT-AATATTCC-AAAAATCATACATCCATTTAGCAGGTAAGATGGAATATTCTATCAAGCTGTAAAAATCCAGTTTCCATGGTACTATAAT--TAATAAAATTTATAGTTAGTAAACCCATCTATGCATACTGTTTATTTTAGTATCATTTAAGTG---AAAGTCACTCTGTCCATTAAATCAAAAATAAAAGTGAT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168595630 1134 - 198365852 attacattcttattggacaAGTGTACACTATAATATCTACATATAACAAAAAC-------TTCATCTAAAACCTCTAACTAATAAAAATCCATCAGTTGCTAAATACATGTTTTGTAGCTGACAGAATAAGATCTATTCA--------------GGTGGCCACACTCTGCAGAAGAATAAAGTACA--------CAATGCAAGCTAATGAGAATCTGAAAAAGG-AAACATCCTTTCAGCCGATTCCCTTCTCCCTCTTTAGAGGAACAGCATAAGTACCACCCATGAAAT--GGACAGAAAG--CTGCAGGAATATGATTATTT-ATAACTTTAAAAGATCATGAGACTCTGTCTTAGATGCTTTATCTGAACTC-------CAAACCTGGATCCATATCACCACATCACACAACTATATCTGCGGCAGTTGAACCTGTTTAGATTGCAGAGGGTCCTACCGAGCTGCATGCATGGAGAAAATGCATCCTAAAAGTGAAAGCTCAAAGTAAAATATGGTCATTATATTTTAGAAACAAAGTTTAAAATAAAGCAGTGACCACAATATTCAGTCATCCACCATAACATTATGTGCTGTGATCTCCATTTCTGGATATGGATTGCTAAATAGCAATATATAAACAAACAACATCAAAGTGCCTTTTTGGCTAACTGCCACTCTACCACTTCTGAACTGAAGCCAATTATAATGACATCACCCGAGCTTCTTGTCCTTTGCTGACCTTCCTACTTATGTTGCCAAAATGTATTAAATTTCTCCTCTACAATTTGTC--TTATTCCCTTTGTCTTTGTTTCTTTAAATAATGACTTGACATCACTTGACCTCAACCTACAATTTTGGCTGGTAATACCACCGAGCAATTCACTTACATAAATGGCTTTGCATAATCATCCGTTGTGTCACAGAAAAATAACTGCACAAGAAAAGGTTGAATTTGTATAATGTGGAACTGAAGAAAATTATTTT-AATATTCT-AAAAATCATACATCCATTTAGCAGGTAAGATGGGATATTCTATCAAGCTGTTAAAATCCAGTTTCCACCGTACTATAAT--TAATAAAATTTATAGTTAGTAAACCCATCTATGCATACTGTTTATTTTAGTATTCTCTAAGTG---AAAGTCACTCTGTCCATTAAATCAAAAATAAAAGTGAT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162259397 1134 - 192294377 attacattcttattggacaAGTGTACACTATAATATCTACATATAACAAAAAT-------TTCATCTAAAACCTCTAACTAATAAAAATCCATCAGTTGCTAAATACATGTTTTGTAGCTGACAGAATAAGATCTATTCA--------------GGTGGCCACACTCTGCAGAAGAATAAAGTACA--------CAATGCAAGCTAATGAGAATCTGAAAAAGG-AAACATCCTTTCAGCCGATTCCCTTCTCCCTCTTTAGAGGAACAGCATAAGTACCACCCATGAAAT--GGACAGAAAG--CTGCAGGAATATGATTATTT-ATAACTTTAAAAGATCATGAGACTCTGTCTTAGATGCTTTATCTGAACTC-------CAAACCTGGATCCATATCACCACATCACACAACTATATCTGCGGCAGTTGAACCTGTTTAGATTGCAGAGGGTCCTACCGAGCTGCATGCATGGAGAAAATGCATCCTAAAAGTGAAAGCTCAAAGTAAAATATGGTCATTATATTTTAGAAACAAAGTTTAAAATAAAGCAGTGACCACAATATTCAGTCATCCACCATAACATTATGTGCTGTGATCTCCATTTCTGGATATGGATTGCTAAATAGCAATATATAAACAAACAACATCAAAGTGCCTTTTTGGCTAACTGCCACTCTACCACTTCTGAACTGAAGCCAATTATAATGACATCACCCGAGCTTCTTGTCCTTTGCTGACCTTCCTACTTATGTTGCCAAAATGTATTAAATTTCTCCTCTACAATTTGTC--TTATTCCCTTTGTCTTTGTTTCTTTAAATAATGACTTGACATCACTTGACCTCAACCTACAATTTTGGCTGGTAATACCACTGAGCAATTCACTTACATAAATGGCTTTGCATAATCATCCGTTGTGTCACAGAAAAATAACTGCACAAGAAAAGGTTGAATTTGTATAATGTGGAACTGAAGAAAATTATTTT-AATATTCT-AAAAATCATACATCCATTTAGCAGGTAAGATGGGATATTCTATCAAGCTGTTAAAATCCAGTTTCCACCGTACTATAAT--TAATAAAATTTATAGTTAGTAAACCCATCTATGCATACTGTTTATTTTAGTATTCTCTAAGTG---AAAGTCACTCTGTCCATTAAATCAAAAATAAAAGTGAT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150955372 1133 - 180432695 ATTACATTCTTATTGGACAAGTGTGCACTATAATATCTACATATAACAAAAAT-------TTCATCTAAAACCTCTAACTAATAAAAATCCATCAGTTGCTAAATACATGTTTTGTAGCTTACAGAATAAGATCTATTCA--------------GGTGGCCACACTCTGCAGAAGAATAAAGTACA--------CAATGCAAGCTAATGAGaatctgaaaaagg-aaacatcctttCAGCCgattcccttctccctctttAGAGGAATAGCATAAGTACCACCCATGAAAC--GGACAGAAAG--CTGCAGGAATATGattattt-ataactttaaaagatCATGGGACTCTGTCTTAGATGCTTTATCTGAACTC-------CAAACCTGGATCCATATCACCACATCACACAACTATATCTGCGGCAGTTGAACCTGTTTAGATTGCAGAGGGTCCTACCGAGCTGCATGCATGGAGAAAATGCATCCTAAAAGTGAAAGCTCAAAGTAAAATATGGtcattatattttagaaacaaagtttaaaataaagcAGTGACCACAATATTCAGTCATCCACCATAACGTTATGTGCTGTGATCTCCATTTCTGGATATGGATTGCTAAATagcaatatataaacaaacaacatCAAAGTGCCTTTTTGGCTAACTGCCACTCTACCACTTCTGAACTGAAGCCAATTATAATGACATCACCCGAGCTTCTTGTCCTTTGCTGACCTTCCTACTTATGTTgccaaaatgtattaaatttctCCTCTACAATTTGTC--TTATTccctttgtctttgtttctttaaataatgaCTTGACATCACTTGACCTCAACCTACAATTTTGGCTGGTAATACCACTGAGCAATTCACTTACATAAATGGCTTTGCATAATCATCCGTTGTGTCACAGAAAAATAACTGCACAAGAAAAGACTGAATTTGTATAATGTGGaactgaagaaaattatttt-aatattct-aaaaatcATACATCCATTTAGCAGGTAAGATGGGATATTCTATCAAGCTGTTAAAATCCAGTTTCCACCGtactataat--taataaaatttatagttAGTAAACCCATCTATGCATACTGTTTATTTTAGTATTCTCTAAGTG---AAAGTCACTCT-TCcattaaatcaaaaataaaagtgat i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15044668 1135 - 90373283 attacattctttttggacaAGTGTGCGCTATAATATCTACATATAACAAAAAT-------TTCATCTAAAACCTCTAACTAATAAAAATCCATCAGTTGCTAAATACATGTTTTGTAGCTGACAGAGTAAGATCTATTCA--------------AGTGGCCACATTCTGCAGAAGAATAAAGTACA--------CAATGCAAGTTAATGAGAATCTGAAAAAGGAAAACATCCTTTCAGCCGATTCCCTTCTCCCTCTTTAGAGGAATAGCATAAGTACCACCCATGAAAC--GGACAGAAAG--CTGCAGGAATATGATTATTT-ATAACTTTAAAAGATCATGAGACTCTGTCTTAGATGCTTTATCTGAACTC-------CAAACCTGGATCTATATCACCACATCACACAACTATATCTGCAGCAGTTGAACCTGTTTAGATTGCAGAGGGTCCTACCGAGCTGCATGCATGGAGAAAATGCATCCTAAAAGTGAAAGCTCAAAGTAAGATATGGTCATTATATTTTAGAAACAAAGTTTAAAATAAAGCAGTGACCACAATATTCAGTCATCCACCATAAAATTATGTGCTGTAATCTCCATTTCTGGATATGGATTGCTTAAGAGCAATATATAAACAAACAACATCAAAGTGCCTTTTTGGCTAACTGCCACTCTACCACTTCTGAACTGAAGCCAATTATAATGACATCACCCGAGCTTCTTGTCCTTTGCTGACCTTCCAACTTATGTTGCCAAAATGTATTAAATTTCTCCTCTACAATTTGTC--TTATTCCCTTTGTCTTTGTTTCTTTAAATAATGACTTGACATCACTTGACCTCAACCTACAATTTTGGCTGGTAATACCACTGAGCAATTCACTTACATAAATGGCTTTGCATAATCATCCGTTGTGTCACAGAAAAATAACTGCACAAGAAAAGGTTGAATTTGTATAATGTGTAACTGAAGAAAATTATTTT-AATATTCT-AAAAATCATACATCCATTTAGCAGGTAAGATGGGATATTCCATCAAGCTGTTAAAATCCAGTTTCCACTGTACTATAAT--TAATAAAATTTATAGTTAGTAAACCCATCTATGCATACTGTTTATTTTAGTATTCTCTAAGTG---AAAGTCACTCTGTCCATTAAATCAAAAATAAAAGTGAT i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21943944 1125 + 50472720 agtacattcttattggacaAGTGTGCTCTATAATATCTACATATAACAAAAAT-------TTCAACTAAAATCTCTAACT-ATAAAAAGCCATCAGTTGCTAAATACATGTTTTGTAGCTGACAGAGTAAGATCTATTTA--------------GGTGGCCACATTCTGCAGAAGAATAAAGTATA--------TGTCACAAGCTAATGAGAATCTAAAAAAGGAAAACATCCTTTCAGCCAATTGTTTTCTCCCTCTTTAGAGAAATGGCATAGGTACCACCCATGAAAC-AGGACAAAAAG--CTGCAGGGATATGATTATTT-GTAATTTTAAAAGATCATGAGACTCTTTTCTAGGTGCTTTGTCTGAACTG-------CAGACCTATATCAATATCACTACATCACACAACTATATCTGCAGCAGTTGAACCTGTTTAGATTGTAGAGGGTCCTACAGATCTGCATGCATGGAGAAAGTGCATTCTAAAAGTGAAAGATCAAAGTAAGATATGATCATTGCACTTTAGAAACAAAGTTT-ATATAAAATAGTGACCACAATATTCAGTCATCCACCATAAAATGATGTGCTGTGAT---TACATCTGGATACGGATAGCTAAATAGTAATATATAAACAAACAACAGCCAAGTGCCTTTTTGGCTAACTGCCACTCTGCCACTTCTGAACTAAAGCCGATTATAATGACATCACTCGAGCTTCTTGTCCTTTGCTGACCTTCCTACTTATGTTGCCAAAATGTATTAAATTTCTCCTCCACAATTTGTC--TTATCCCCTTTGTCTTTGTTTCTTTAAATAATGACTTGACATCACTTGACCTCAACCTACAATTTTGGCTGATAATATCACTGAGCAATTCACTTACATAAATGGCTTTGCATAATCATCGCTTGTGTCACAGAAAAA-AATCGTGCAAGAAAAGGTTGAGTTTGTATGATGTGGAACTGAAGGAAATTATTTT-AATATTCT-AAAAATCATGCCTCCACTTAGCATGTAAGATGGAATATTCTGTCATGCTGTAAAAATCCAGTTACCACGCTACTATAAT--TATTAAAATTTATAGTTAGTAAACTCATCTAGGCCTACTG-----TTTAGTATTCTGTAAGTG---AAAGTCACTCTGTCCATTAAATCAAATATATAAGTGAT i calJac3.chr21 C 0 C 0 s mm10.chr16 78135066 1136 + 98207768 ATTATATTTCCATTGGACCGGATTGTTCAACAATATCTGTATGCAGAAGTAATTCACTTCTTGGTTAAAAACCTTTAACCGGTATGAAGTCATCGATGGCTAGATGTCTATGACGTAGCTAATAAATTAAAAGCTATTCAAAAAAGAGAGAGAGAGAGCCCACTGTCTACAAAGAAAGAGAATACACAATAATGCAATACAAATTAGTCAGGAGCTGAAAAAGGAAAACACCCTTCCAGCTTATTGGTTTATCTCTTTTC---------------TCTCCAAGCATGAAAC-AGAAAGAGAAGTTCTGCAGAGATAGCAT--TTC-ATAATCTCAAAACATCATGGGATTACTTCCTTAATATGTTACCAAAACTCAGAAGTTCAAACCTACATCAGCGTCATTCTATCAAGCAAAGACCTCTACAGCAACTGTACTGAGTCAGATTTTAAAAGGTTCGACAGAGATGCGTGTTTCAAGGAAACACGTCTTTAAAATGAAAGTTCTAACTAAGATGAAGTCATTGTGTTCTAAAAACAAAGTTTAAGATGATGCAGTAGTCACAACAATCAGTCACCCACCCTTAAATTATCTGTTGTAACCTCCACTTCTGGGTATGGATAGCTAAATGACAAAGTATAAACAAGCCGCGTCAAAGTGCCTTCTTGGCTAACTGCCACCCTGCCACTTCTGAACTGAAGCCAGTTATGATGACATCACTCCAGCTTTGTGTCCT--------------ACATATGTTGCTAAAATGCATTAAATGTCTTCCTTCCAATTTGCCCTTTATTCACTTTGGC----TTCCTTTAAATAATGACTTGACATCTCTTGACCTCAACCTACAATTTTGGCTAATATTACCACTGAGCAATTGATCTACAGAGACAGTCTTGTAGAATCATCTTCTGTGTCATATGTAAATG--TGTGCAAGAAAAGACTGAATTTATATAACACAGAACT----AAGTTTATTTT-AAATATAC-AAAAGCCTCACTTTGATTTCATAGGTAAGATAGGATG-TCCGTCAAGCTG-AGAAATCCAGTTTTTATGGTCCCATAACTATAAAAAGATGTATAATTAGCAAACCCATGTTCACAGA-TGTCTA-TTTAGTATTCTTTAACTGAAAAAAATCACTGTGACCGCTCAGTTAAAACCATAAGTTAT i mm10.chr16 I 752 I 5 s canFam3.chr31 13838251 1089 + 39895921 attatatttct----GAAAAGTTTGTTTTATCATATCTGCAGGAAACAAAAAC-------TGCATC-----------------AGGAAGCCATCAGTTGCTAAACACATATGATTTAACCAATGGAGTAAGAGTTAGTTA--------------GGTAGCCATGGTGTTTGG--GGAGAAAGCACA---------------ATCTATTGAGAAACTGAAAAAGGAAAATATCCTTCCAGCTGACTCCTTTCTTCCTCTTTATAGGCGTGGCATAAATGCCACCCATGAAGCTAGGATAGATA---CTGCAGAGATCTGATTATTTCATAATTTTAAAACATCATGGGAATCTTCCCTAAATGCTTTGTCTGAACTC-------AAAATCTATATCCATATCACTTCAACAAACAAATATCTCTGCAGCCATTTGACCTGTCTAGATTGTAGAGGATCCTACAGGTCTGCATATAT-GAGGAAATGCATCTTAAAA-TGAAAGCTCTAAATAAGATATAGTCATTGCATTTTAGAAACAAAGTTTAAAGTAAGACAGTAACCACAATATTCA-TCATCCACCATAAAATTATCTGCTGTAATCTCCACTTCTGGATATGGATAGCTAAATAGCAATATATAAACAAACAACATCAAAGTGCCTTTTTGGCTAACTGCCACCCTGCCATTTCTGAACTATAGCCAATTATAATGACATCACTCTAGCTTTGTGTCCTTTACTGACCTTCCTACTTATGTTGCCAAAATGTATTAAATTTCTCCTCTACAATCTGTC--TTTTTCCCTTTGCCTTTGTTTCTTTAAATAATGACTTGACATCACTTGACCTCAACCTACAATTTTGGCTGATAATATCACTGAGCAATTCACTTACATAAATGGCCTTGCATAATCATCTGTTGTGTCACAGAAAAAT--TTGTGCAAGACAAGATTGAATCTGTGTGACATA-AACTGAAGAAATTTCTTTTAAATATTCT-AAAAATCATACCTCCATTAGGCAGCTGAAATGAGA-------TCAAGCTATAAAAATCTAGTTTCCATAGTACTAGAGT--TTAAAAA---TATGTTTAGTAAATCGACCTGCACA---TGTCTATTTTAGCATTCTTTAAGTA---AAAGTCATTCTGACCACTAAATTAAAAATGAgggcagc i canFam3.chr31 C 0 C 0 a score=4500.000000 s hg38.chr21_KI270874v1_alt 107846 1 + 166743 C s panTro4.chr21 3721382 1 + 32799110 C i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16984349 1 + 48394510 C i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4481387 1 + 32716333 C i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168596764 1 - 198365852 C i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162260531 1 - 192294377 C i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150956505 1 - 180432695 c i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15045803 1 - 90373283 C i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21945069 1 + 50472720 C i calJac3.chr21 C 0 C 0 s canFam3.chr31 13839340 1 + 39895921 c i canFam3.chr31 C 0 I 215 e mm10.chr16 78136202 5 + 98207768 I a score=109539.000000 s hg38.chr21_KI270874v1_alt 107847 39 + 166743 CAGTGAAATTGCTTGGTCAATGTGCTTGTAG-TTTTTCAA s panTro4.chr21 3721383 39 + 32799110 CAGTGAAATTGCTTGGTCAATGTGCATGTAG-TTTTTCAA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16984350 39 + 48394510 CAGCGAAATTGCTTGGTCAATGTGTATGTAG-TTTTTCAA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4481388 39 + 32716333 CAGCGAAATGGCTTGGTCAATGTGTATGTAG-TTTTTCAA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168596765 39 - 198365852 TAGTGAAATTGCTGGGTCAATGTGTATATAG-TTTTTCAA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162260532 39 - 192294377 TAGTGAAATTGCTGGGTCAATGTGTATATAG-TTTTTCAA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150956506 39 - 180432695 tAGTGAAATCGCTGGGTCAATGTGTATATAG-TTTTTCAA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15045804 40 - 90373283 TAGTGAAATTGCTGGGTCAATGTGTATATAGTTTTTTCAA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21945070 39 + 50472720 Cagtgaaattgctgggtcaatgtgtatgcaa-tttttcaa i calJac3.chr21 C 0 C 0 e canFam3.chr31 13839341 215 + 39895921 I e mm10.chr16 78136202 5 + 98207768 I a score=511232.000000 s hg38.chr21_KI270874v1_alt 107886 152 + 166743 TTCAGAAAT--ATACCCTAGTTTTATAAAGGATTGAAAT-AAGGCATACTGATCTTACATGCATTAGTCCAAGATGAGAAGTCCTTTCCCTGCGAAGGGACCTTAGGCATCTGCCAAGTTCTGGTGATCTATTACATGTAACAATGTTTTCTCTG s panTro4.chr21 3721422 152 + 32799110 TTTAGAAAT--ATACCCTAGTTTTATAAAGGATTGAAAT-AAGGCATACTGATCTTACATGCATTAGTCCAAGATGAGAAGTCCTTTCCCTGTGAAGGGACCTTAGGCATCTGCCAAGTTCTGGTGATCTATTACATGTAACAATGTTTTCTCTG i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16984389 152 + 48394510 TTTAGAAAT--ATACCCTAGTTTTATAAAGGATTGAAAT-AAGGCATACTGATCTTACATGCATTAGTCCAAGATGAGAAGTCCTTTCCCTGCAAAGGGACCTTAGGCATCTGCCAAGTTCTGGTGATCTATTACATGTAACAATGTTTTCTCTG i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4481427 152 + 32716333 TTTAGAAAT--ATACCCTAGTTTTATAAAGGATTGAAAT-AAGGCATACTGACCTTACATGCATTAGTCCAAGATGAGAAGTCCTTTCCCTGGGAAGGGACCTTAGGCATCTGCCAAGTTCTGGTGATCTATTACATGTAACAATGTTTTCTCTG i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168596804 152 - 198365852 TTTAGAAAT--ACACTCCAGTTTTATAAAGGATTAAAATAAAGGCATACTGATCTTACATGCATTAGTCCAAGACGACAAGTCCTTTCCCTGCGAAGGGATCTTAGGCATCTGCCAAATTCTGGTGATCTATTATATGTAACAATGTTTG-TCTG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162260571 151 - 192294377 TTTAGAAAT--ACACTCCAGTTTTATAAAGGATTAAAAT-AAGGCATACTGATCTTACATGCATTAGTCCAAGACGAGAAGTCCTTTCCCTGCGAAGGGATCTTAGGCATCTGCCAAATTCTGGTGATCTATTATATGTAACAATGTTTG-TCTG i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150956545 151 - 180432695 TTTAGAAAT--ACACTCCAGTTTTATAAAGGATTAAAAT-AAGGCATACTGATCTTACATGCATTAGTCCAAGACAAGAAGTCCTTTCCCTGCGAAGGGATCTTAGGCATCTGCCAAATTCTGGTGATCTATTATATGTAACAATGTTTG-TCTG i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15045844 151 - 90373283 TTTAGAAAT--ACACTCCAGTTTTATAAAGGATTAAAAT-AAGGCATACTGATCTTACATGCATTAGTCCAAGATGAGAAGTCCTTTCCCTGCGAAGGAATCTTAGGCATCTGCCAAATTCTGGTGATCTATTATATGTAACAATGTTTG-TCTG i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21945109 152 + 50472720 cttagaaat--acatgctagttttacaaagGATCTAAAT-AAGTCCTACTGATCTTACATGCATTAGTCCAAGATGACAAGTCCTTTCCCTGGAAAAGGACCTTAGGCATCTGCCAAGTTCTGGTGATCTATTGTATATAACAGTGTTTTCTCTG i calJac3.chr21 C 0 C 0 s canFam3.chr31 26054772 153 - 39895921 TTTAGAGATCCACAATTCAGTTTCACATAAGGTGAAAAC-AAGACCCACTGGTTTTATGTGCATTAATTCAAAATGACATGTTTCTTTCCTAGGAAGGAACCCTAGGCATATGCCAGGTTCCGGTAAACTATTACAGACTACAATGTTTC-TCAG i canFam3.chr31 T 57565 n 215 e mm10.chr16 78136202 5 + 98207768 I a score=4500.000000 s hg38.chr21_KI270874v1_alt 108038 1 + 166743 C s panTro4.chr21 3721574 1 + 32799110 C i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16984541 1 + 48394510 C i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4481579 1 + 32716333 C i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168596956 1 - 198365852 C i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162260722 1 - 192294377 C i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150956696 1 - 180432695 C i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15045995 1 - 90373283 C i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21945261 1 + 50472720 C i calJac3.chr21 C 0 C 0 s canFam3.chr31 13839556 1 + 39895921 C i canFam3.chr31 I 215 C 0 e mm10.chr16 78136202 5 + 98207768 I a score=677497.000000 s hg38.chr21_KI270874v1_alt 108039 195 + 166743 ATTAGCTAAGGTCTTCAAGCATAATCGAAATCCTAGATATATTTGCATATCCACATATGCTAAG---GAAAA-TAACTGTTTATCAATTTGATAAAAAATGAATCTCTTTGGCATGT-----TA----AA----AGTT-TTTTCTG--AAAAAAATAGAGCCCAGCTAATAAAAAATATTTTCTGATAGAATAATTATGTAATAAAATGTGTGCT s panTro4.chr21 3721575 195 + 32799110 ATTAGCTAAGGTCTTCAAGCATAATCAAAATCCTAGATATATTTGCATATCCACATATGCTAAG---GAAAA-TAACTGTTTATCAATTTGATAAAAAATGAATCTCTTTGGAATGT-----TA----AA----AGTT-TTTTCTG--AAAAAAATAGAGCCCAGCTAATAAAAAATATTTTCTGATAGAATAATTATGTAATAAAATGTGTGCT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16984542 195 + 48394510 ATTAGCTAAGGTCTTCAAGCATAATTGAAATCCTAGATATATTTGCATATCCACATATGCTAAG---GAAAA-TAACTGTTTATCAATTTGGTAAAAAATGAATATCTTTGGAATGT-----TA----AA----AGTT-TTTTCTG--AAATAAATATAGCCCAGCTAATAAAAAATATTTTCTGATAGAATAATTATGTAATAAAATGTGTGCT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4481580 193 + 32716333 ATTAGCTAAGGTCTTCAAGCATAATTGAAATCCTAGATATATTTGCATATCCACATATGCTAAG---GAAAA-TAAC--TTTATCAATTTGATAAAAAATGAATCTCTTTGGAATGT-----TA----AA----AGTT-TTTTCTG--AAAAAAATATAGCCCAGCTAATAAAAAATATTTTCTGATAGAATAATTATGTAATAAAATGTGTGCT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168596957 196 - 198365852 ATTAGCTAAGGTCTTCAAGCATGAATGAAATCCTAGATATATTTGGATATCCACATATACTAAG---GAAAA-TAGCTGTTTATCAATTTGATAAAAAAGGAATCTCTTTGGAACAT-----TA----AA----AGTT-TCTTCTG-AAAAAAAATATAGCCCAGTTAATAAAAAATATTTTCTGATAGAATAATTATGTAATAAAATGTACGCT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162260723 197 - 192294377 ATTAGCTAAGGTCTTCAAGCATGAATGAAATCCTAGATATATTTGGATATCCACATATACTAAG---GAAAA-TAGCTGTTTATCAATTTGATAAAAAAGGAATCTCTTTGGAACAT-----TA----AA----AGTT-TCTTCTGAAAAAAAAATATAGCCCAGTTAATAAAAAATATTTTCTGATAGAATAATTATGTAATAAAATGTACGCT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150956697 196 - 180432695 ATTAGCTAAGGTCTTCAAGCATGACTGAAATCCTAGATATATTTGGATATCCACATATACTAAG---GAAAA-TAGCTGTTTATCAATTTGATAAAAAAGGGATCTCTTTGGAACAT-----TA----AA----agtt-tcttctg-aaaaaaaatatagcccagttaataaaaaatattttctgatagaataattatgtaataaaatgcACGCT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15045996 195 - 90373283 ATTAGCTAAGGTCTTCAAGCATGACTGAAATCCTAGATATACTTGGATATCCACATATACTAAG---GAAAA-TAGCTGTTTATCAATTTGATAAAAAATGAATCTCTTTGGAATGT-----TA----GA----AGTT-TTTTCTG-AAAAAAAA-ATAGCCCAGTTAATAAAAAATATTTTCTGATAGAATAATTATGTAATAAAATGTACGCT i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21945262 197 + 50472720 ATTAGCTAAGGTCTTCAAACATGATTGAAATCTTAGATATATTTGGATATCCACATATACTAAG---GAAAA-TAAC--ATTATCAATTTGAT-AAAAATGAATCTCTTTGGAATGT-----TA----AAACACAGTT-ATTTTTC-TAAAAAAAAATAGCCCAGTTAATAAAGAATATTTTCTGATAGAATAATTATGCAATAAAATGTGTGCT i calJac3.chr21 C 0 C 0 s mm10.chr16 78136207 198 + 98207768 ATTAGTTAGGCCTCCTAAGTGTGATTAAAGGCTTGGGTATGTTTGACTATCCACAATAAGAAAG---GAAAATTAAGTAGCTCTCCATTTGAAGCAATATT-ATCTGTTTGAAGTGTAAAGCTG----AA----AGCT-TGTTTTT-CCTTTAACTATGACCTACTTAATA---AATACTCATTAGAATAAACATCACAGAATAAAACTTGAACT i mm10.chr16 I 5 I 103 s canFam3.chr31 13839557 204 + 39895921 ATTAGTTGAGGTCTTCAATCATGACTGAAGCGTTGAATGTATTTGAAAATCCACAAATACTAAGAAAGAAAA-CAATTGTTTATCTATCTGAAAGAAAATTAATCTCTTTGGAATGT-----TAAGACAA----AGTTATTTTCTG-AAAAAATATATAGTCCAGTCAATAAAGAATATATATTAATGGGATAATTATGTTAAAAAGTATGTGCT i canFam3.chr31 C 0 I 663 a score=54452.000000 s hg38.chr21_KI270874v1_alt 108234 19 + 166743 AGTCTGTATTATGATGTTG s panTro4.chr21 3721770 19 + 32799110 AGTCCGTATTACGATGTTG i panTro4.chr21 C 0 I 432 s ponAbe2.chr21 16984737 19 + 48394510 AGTCTGTATTATGATGTTG i ponAbe2.chr21 C 0 I 432 s nomLeu3.chr25 4481773 19 + 32716333 AGTCTGTATTATGATGTTG i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168597153 19 - 198365852 AGTCTACATTATGATGTTG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162260920 19 - 192294377 AGTCTACATTATGATGTTG i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150956893 19 - 180432695 AGTCTACATTATGATGTTG i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15046191 19 - 90373283 AGTCTACATTATGATGTTG i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21945459 19 + 50472720 AGTATATATTATGATGCTG i calJac3.chr21 C 0 C 0 e canFam3.chr31 13839761 663 + 39895921 I e mm10.chr16 78136405 103 + 98207768 I a score=3276.000000 s hg38.chr21_KI270874v1_alt 108253 1 + 166743 A s panTro4.chr21 3722221 1 + 32799110 a i panTro4.chr21 I 432 C 0 s ponAbe2.chr21 16985188 1 + 48394510 a i ponAbe2.chr21 I 432 C 0 s nomLeu3.chr25 4481792 1 + 32716333 A i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168597172 1 - 198365852 A i rheMac3.chr3 C 0 I 423 s macFas5.chr3 162260939 1 - 192294377 A i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150956912 1 - 180432695 A i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15046210 1 - 90373283 A i chlSab2.chr2 C 0 I 438 s calJac3.chr21 21945478 1 + 50472720 A i calJac3.chr21 C 0 C 0 e canFam3.chr31 13839761 663 + 39895921 I e mm10.chr16 78136405 103 + 98207768 I a score=4534.000000 s hg38.chr21_KI270874v1_alt 108254 4 + 166743 CCCA s panTro4.chr21 3722222 4 + 32799110 ccca i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16985189 4 + 48394510 cccg i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4481793 4 + 32716333 CTCA i nomLeu3.chr25 C 0 I 432 s macFas5.chr3 162260940 4 - 192294377 TTCA i macFas5.chr3 C 0 I 418 s papAnu2.chr3 150956913 4 - 180432695 TTCA i papAnu2.chr3 C 0 I 419 s calJac3.chr21 21945479 4 + 50472720 CTCA i calJac3.chr21 C 0 I 432 e canFam3.chr31 13839761 663 + 39895921 I e mm10.chr16 78136405 103 + 98207768 I e rheMac3.chr3 168597173 423 - 198365852 I e chlSab2.chr2 15046211 438 - 90373283 I a score=3276.000000 s hg38.chr21_KI270874v1_alt 108258 1 + 166743 T s panTro4.chr21 3722226 1 + 32799110 t i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16985193 1 + 48394510 t i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4482229 1 + 32716333 t i nomLeu3.chr25 I 432 C 0 s rheMac3.chr3 168597596 1 - 198365852 t i rheMac3.chr3 I 423 C 0 s macFas5.chr3 162261362 1 - 192294377 t i macFas5.chr3 I 418 C 0 s papAnu2.chr3 150957336 1 - 180432695 T i papAnu2.chr3 I 419 C 0 s chlSab2.chr2 15046649 1 - 90373283 t i chlSab2.chr2 I 438 C 0 s calJac3.chr21 21945915 1 + 50472720 t i calJac3.chr21 I 432 C 0 e canFam3.chr31 13839761 663 + 39895921 I e mm10.chr16 78136405 103 + 98207768 I a score=5295701.000000 s hg38.chr21_KI270874v1_alt 108259 1613 + 166743 AACATAGTT-AGAGCTCAATCAACTATA---CTTGCAAAATAGTAGcacttgtttgtacttcgtagtttacaagttcttttcacatgtaacattcagaatcttgtaaaatcttgtgacttaggaaggacacatacatattattagtctggtttagagctgagaaaacaaaggcccaaggacatgctgtcagaaaggatcaaagccagaacttgaattcaaggtttctgaatctgaatttcaaatcctttctattataTATAACTGGAAAAGAGTATCTGGATTCTTTACCTAATAGTACCTGAAATGT-GAGTATACATATTGAATAACTATGATAGGGCTATTGGGACTCACCAGTCTCAGTGACCAAATTGTGGCAG--AAAAAAATAACATAATGAATGATTGGTTTCTTTTTTTCAGTGATTTGCTTTTGCAGTCATTGATGATTCTTAAGTGCCAGTCTTCCTGTGCACTATAACACAGGCTGACAGGTACTGCCTCCCCTCAGAGCTCCTAATCTAAAGGAAGAAATACAGTACATATCTGTGCATCCAGAACATGGAGAGGTGCTGTAGCAGAGTGTC-----AA--AAAAGAATAAGCCACATAGAGAAGAGAAATCCTGAGAAAATATTGTGGTATATAATAGATCACCAGAACTTGGCAGATGCCTGGGGTCCCTTCCCAGCGAAAGAACTTGTCATCTTAGACTAATGCATATAAGATCAGTGGATCTTGTCTTCATCCTTTGTAAAACTAATGTGTAGATTTCTAAGACAATTTCTAGCTTCA------CATTATTATTATCCTATactctcatacaccattggaggagtatcaattagtaaaatc-tttttggagaacaacttgcaaaatcaaaaaaacatgt--acacattgactctgcaatttcactGGATccacttatttccacctctactattagggctggtcaaagtcacaatcatgtcttatctggactacaatggtagccttcttacactggtcctcctgcttccacttcagtgccactacagtatcttctttctacagtgatgggagaaatcatcctaaaaggcaaatcagatggtactacttccctacttaaaaatctcctcatgatttacgataacacttgaaagaaaattcaaatttcttctctgacttacaaagcccccagaagtctgtctttgtttctaatctcaatcattctactctcttgcatgcaccacacattgactaccctggccttctttctgtttct---acatttgggctttgcacaagctgtcccatctgcctcaaataccc-ttctgtgcttatcccttcaaatttcaacttaaatgtcacctcttcaaacgggctgtacctgacaacccaatctaaaggtgactacctaaccaatctgcagcatatcac---tgttttaattctctgcacggcattatccacaatgtgatactttccttatttatttatttatACAATTAATTTTTCATGCATCTATTTTTGAATATATGTATGCATGTTCAtacatattttctatttatttgtttattttttccttccctctatgcactccagagaatttaagtttataagaacagggaATccgggcatggtggcgcatgcctgt s panTro4.chr21 3722227 1601 + 32799110 aacatagtt-agagctcaatcaaCTATA---CTTGCAAAATAGTAGcacttgtttgtacttcatagtttacaagttcttttcacatgtaacattcagaatcttgtaaaatcttgtgacttaggaaggacacacgtatattattagtctggtttagagctgaggaaacaaaggcccaaggacatgctatcagaaaggatcaaagccagaacttgaattcaaggtttctgaatctgaatttcaaatcctttctattatacATAACTGGAAAAGAGTATCTGGATTCTTTACCTAATAGTACCTGAAATGT-GAGTATACATATTGAATAACCATGATAGGACTATTGGGACTCACCAGTCTCAGTCACCAAATTGTGGCAG--AAAAAAATAACATAATGAATGATTGGTTTCTTTTTTTCAGTGATTTGCTTTTTCAGTCATTGATGATTCTTAAGTGCCAGTCTTCCTGTGCACTATAACACAGGCTGACAGGTACTGCCTCCCCTCAGAGCTCCTAATCTAAAGGAAGAAATACAGTACATATCTGTGCATCCAGAACATGGAGAGGTGCTGTAGCAGAGTGTC-----AA--AAAAGAATAAGCCACATAGAGAAGAGAAATCCTGAGAAAATATTGTGGTATATAATAGATCACCAGAACTTGGCAGATGCCTGGGGTCCCTTCCCAGCGAAAGAACTTGTCATCTTAGACTAATGCATATAAGATCAGTGGATCTTCTTTTCATCCTTTATAAAACTAATGTGTAGATTTCTAAGACAATTTTTAGCTTCA------CATTATTATTATCCTATactctcatacactattggaggagtatcaattagtaaaatc-tttttggtgaacgacttgcaaaatcaaaaaaccacgt--acacattgactctgcaatttcactGGATccacttatttccacctctactattagggctggtcaaagtcacaatcatgtcttatctggactacaatggtagccttcttacactggtcctcctgcttccacttcagtgccactacagtatcct-----------gatgggagaaatcatcctaaaaggcaaatcagatggtactacttccctacttaaaaatctcctcatgatttatgataatacttgaaagaaaattcaaatttcttctctgacttacaaagcccc-agaagtctgtctttgtttctaatctcaatcattctactctcttgcatgcaccacacattgactaccttggccttctttctgtttct---acattcgggctttgcacaagctgtcccatctgcctcaaataccc-ttctgtgcttatcccttcaaatttcaacttaaatgtcacctcttcaaacgggctgtacctgacaacccaatctaaaggtgactacctaaccaatctgcagcatatcac---tgttttaattctctgcacagcattatccacaatgtgatactttccttatttatttatttatACAATTAATTTTTCATGCATCTATTTTTGAATATATGTATGCCTGTTCAtacatattttctatttatttgtttattttttccttccctctatgcactccagagaatttaagtttataagaacagggaATccgggcatggtggcgcatgcctgt i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16985194 1611 + 48394510 aacatagtt-agagctcaatCAACTATA---CTTGCAAAATAGTAGcacttgtttgtacttcatagtttacaagttcttttcacatgtaacattcagaatcttgtaaaatcttttgacttaggaaggacacatacatattattagtctggtttagagctgaggaaacaaaggcccaaggacatgctatcagaaaggatcaaagccagaacttgaattcaaggtttctgaatctgaatttcaaatcctttctattataTATAACTGGAAAAGAGTATCTGGATTCTTTACCTAATAGTACCTGAAATGT-GAGTATACATATTGAGTAACCATGATAGGACTATTGGGACTCACCAGTCTCAGTGACCAAATTGTGGCAG--AAAAAAATAACATAACGAATGATTGGTTTC-TTTTTTCAGTGATTTGCTATTGCAGTTATTGGTGATTCTTAAGTACCAGTCTTCCTGTGCACCATAACACAGGCTGACAGGTACTGCCTCCCCTCAGAGCTCCTAATCTAAAGGAAGAAATACAACACATATCTGTGCATCTAGAACATGGAGGGGTGCTGTAGCAGAGTGTC-----AA--AAAAGAATAAGCCACATAGAGAAGAGAAATCTTGAGAAAATATTGTGGTATATAATAGATCACCAGAACTTGGCAGATGCCTGGGGTCCCTTCCCAGCGAAAGAACTTGTCATCTTAGACTAATGCATATAAGATCAGTGGATCTTGTTTACATCCTTTATAAAACTAATGTGTAGATTTCTAAGACAATTTTTAGCTTCA------CATTATTATTATCCTATactctcatacaccattggaggggtgtcaattagtaaaatg-tttctggagaacaacttgcaaaatc-aaaaaccACAT--ACACATTGA--CTGCAACTTCACTGGATccccttatttccacctctactgttagggctggtcaaagtcacaatcatgtcttatctggactactatggtagccttcttacactggccctcctgcttccacttcagtgccactacagtatcttctttcaacagtgatgggagaaatcatcctaaaaggcaaatcagatggtactacttccctacttaaaaatctcctcatgatttatgataatacttgaaagaaaattcagatttcttctctaacttgcaaagcccc-agaagcctgtctttgtttccaatctcaatcgttcggctctcttgcatgcagcacacattgactaccatgaccttcattctgtttcc---ccatgtgggcttcgcacaagctgtcccatctgcctcaaataccc-ttctgtgcttatcccttcaaatttcaactgaaatgtcacctcttcaaacaggctgtacctggcaacccaatctaacggtgactacctaaccaatctctagcatatcactattgttttaattctctgcacagcattatccacaatgtgatactttccttatttatttatttatACAATTAATTTTTCATGCATCTATTTTTGAATATATGTATGCATGCTCAtacatattttctatgtatttgtttattttttctgtccctctatgcactccagagaatttaagtttataagaacagggaATccaggcatggtggcgcatgcctgt i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4482230 1616 + 32716333 aatatagtt-acagctcaatcaaCTGTA---CTTGCAAAATAGTAGcacttgtttgtactttgtagtttacaagttcttttcacatgtaacattcagaaccttgtaaaatcttgtgacttaggaaggacacatacatattattagtctggtttagagctgaggaaacaaaggcccaaggacatgctatcagaaaggatcaaagccagaacttgaattcaaggtttctgaatctgaatttcaaatcctttctaGTATGTATAACTGGAAAAGAGTATCTGGATTCTTTACCTAATAGTACCTGAAATGTGGAGTATACATGTGGAATAACCATGATAGGACTATTGGGACTCACCAGTCTCAGTGACCAAATTGTGGCAG--AAAAAAATAACATAATGAATGATTGGTTTC-TTTTTTCAGTGATTTGCTTTTGCAGTCATTGATGATTCTTAAGCACCAGTCTTCCTGTGCACCAT-ACACAGGCTGACAGGTACTGCCTCCCCTCAGAGCTCCTAATCTAAAGGAAGAAATACAATACATATCTGTGCATCTAGAACATGGAGAGGTGCTGTAGCAGAGTGTC-----AA--AAAAGAATAAGTCACATAGAGAAGAGAAATCCTGAGAAAATATTGTGGTATATAATAGATCACCAGAACTTGGCAGATGCCTGGGGTCCCTTCCCAGAGAAAGAACTTGTCATCTTAGACTAACGCATATAAGATCAGTGGATCTTGTTTTCATCCTTTATAAAACTAACGTGTAGATTTCTAACACAATTTTTAGCTTCA------CATTATTATTATCCTATattctcatacaccattggaggagtgtcaattagtaaaatc-tttttggagaacaacttgcaaaatcaaaaaaccacgtacacacattgactctgcaatgtcactGGATccacttatttccacctctactattagggctcgtcaaagtcacaatcatgtcttatctggactactatggtacccttcttacactggtcctcctgcttccacttcagtgccactacagtatcttctttctacagtgatgggagaaatcatcctaaaaggcaaatcagatggtactacttccctacttaaaaatctcctcatgatttatgataatactagaaagaaaattcaaatttcttctctgacttacaaagcccc-agaagtctgtctttgtttctaatctcaatcattctactctcttgcatgcaccacacattgattaccctggccttctttctgtttct---acatttgggctttgcacaagctgtcccatctgcctcaaataccc-ttctgtgctcatcctttcaaatttcaacttaaatgtcacctcttcaaacaggctgtacctgacaacccaatctaaaggtgactacctaaccaatctccagcatatcactgttgttttaattctctgcacagcattatccacaatgtgatactttccttatttatttatttatACAATTAATTTTTCATACATCTATTTTTGAATATATGTATGCATGTTCAtacatattttctatttatttgtttattttttccttccctctatgcactccagaggatttaactttataagaacagagaATctgggcatggtggcgcatgcctgt i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168597597 1604 - 198365852 aacatagtt-agagttcaGTCAACTATA---ATTGCAAAATAGTAGcacttgtttgtacttcatagtttacaagttcttttcacatgtaacattcagaatcttgtaaaatcttgtgacttaggaaggacacatacatagtatgaatctggtttagagttgaggacacaaaggcccaaggatatgctatcagaaaggatcaaagccagaatttgaattcaaggtttctgaATATGAATTTCAAATATTTTCTATTACATATAACTGGAAAAGAGTATCTGGATTCTTTACCTAATACTACCTGAAATGT-GAGTATACATATTGAATAACCATGATAGGACTATTGGGACTCACCAGTCTCAGGGACCAAATTGTGGCAG-AAAAAAAATAACATAATGAATCACTGGTTTC--TTTTTCAGGGATTTGCTCTTGCAGTCATTGACGATTCTTAGGTGCCAGTCTTCCTGTGCACCATAACACAGGCTGACAGGTACTGCCTCCCCTCAGAGATCCTAATCTAAAGGAAGAAATACAATACATATCTGTGCATCTAGAACATGGAGAGGTACTGTAGCAGGGTGTC----------AAAGAATAAGCCACATAGAGAAGAGAAATCCTGAGAAAATATTGTGGTATATAGTAGATCGCCAGAACTTGGCAGATGCCTGGGGTCCCTTCCCAGTGAAAGAACTTGTCGTCTTCGACTAATGCATATAAGATCAGCGGACCTTGTTTTCATCCTTTATAAAACGAATGTGTAGATTTCTAAGACAATTTTTAGCTTCA------CATTATTATTATCCTATactctcatacacctttggaggagcatcagttagtaaaatc-tttttggagaacaacttgcaaaatcaaaaaaccatgt--acacattgactctgcaatttcactGGATccacttatttgcgcctctactattagggttggtcaaaatcacaagcatgtcttatctggactactatggtagccttctt--agtggtcctcctgcttctacttcagtgccaccacaagatcttctttctacagcaatgggggaaatcatcctaaaaggcaaatcagatggtagtacttccctacttaaaaatctcctcatgatttatcataatacatgaaagaaaattcaaatttctcctctgactgacaaagcccc-agaagtttgtttttgtttctcatctcaatcattccactgtcttccatacaccacacattgactaccctggccttctttctgtttct---acatttgagctttgcaccagctgtcccatctgcctcaaatactc-ttctgtgctcatccattcaaatttcaacctaaatgtcacctcttcaaacaggctgtacctgacaacccaatctaaatgtgaccacctaaccagtctccagcatatcactgtcgttttaattctctgtacagcattatccatgatgtgatactttcc----ttatttatttatACAATTAATTTTTCATACATCTATTTTTGAATATACATATGCATGTTCAtacatattttctatttatttgtttatttttt-tttccctttatgcactccagagaatttaagtttatcagaacagggaagccaggcgtggtggcgcatgccttt i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162261363 1599 - 192294377 aaca----t-agAGTTCAGTCAACTATA---ATTGCAAAATAGTAGCGCTTGTTTgtacttcatagtttacaagttcttttcacatgtaacattcagaatcttgtaaaatcttgtgacttaggaaggacacatacatagtatgaatctggtttagagttgaggacacaaaggcccaaggaTATGCTATCAGAAAGGATCAAAGCCAGAATTTGAATTCAAGGTTTCTGAATATGAATTTCAAATATTTTCTATTACATATAACTGGAAAAGAGTATCTGGATTCTTTACCTAATACTACCTGAAATGT-GAGTATACATATTGAATAACCATGATAGGACTATTGGGACTCACCAGTCTCAGGGACCAAATTGTGGCAG--AAAAAAATAACATAATGAATCACTGGTTTC--TTTTTCAGGGATTTGCTCTTGCAGTCATTGACGATTCTTAGGCGCCAGTCTTCCTGTGCACCATAACACAGGCTGACAGGTACTGCCTCCCCTCAGAGATCCTAATCTAAAGGAAGAAATACAATACATATCTGTGCATCTAGAACATGGAGAGGTGCTGTAGCAGGGTGTC----------AAAGAATAAGCCACATAGAGAAGAGAAATCCTGAGAAAATATTGTGGTATATAGTAGATCGCCAGAACTTGGCAGATGCCTGGGGTCCCTTCCCAGTGAAAGAACTTGTCATCTTCGACTAATGCATGTAAGATCAGCGGACCTTGTTTTCATCCTTTATAAAACGAATGTGTAGATTTCTAAGACAATTTTTAGCTTCA------CATTATTATTATCCTATactctcatacacctttggaggagcatcagttagtaaaatc-tttttggagaacaacttgcaaaatcaaaaaaccatgt--acacattgactctgcaatttcactGGATccacttatttgcgcctctactattagggctggtcaaaatcacaagcatgtcttatctggactactatggtagccttctt--agtggtcctcctgcttctacttcagtgccaccacaagatcttctttctacagcaatgggggaaatcatcctaaaaggcaaatcagatggtagtacttccctacttaaaaatctcctcatgacttatcataatacataaaagaaaattcaaatttctcctctgactgacaaagcccc-agaagtttgtttttgtttctcatctcaatcattccactgtcttccatacaccacacattgactaccctggccttctttctgtttct---acatttgagctttgcaccagctgtcccatctgcctcaaatactc-ttctgtgctcatccattcaaatttcaacctaaatgtcacctcttcaaacaggctgtacctgacaacccaatctaaatgtgaccacctaaccagtctccagcatatcactgtcgttttaattctctgtacagcattatccatgatgtgatactttcc----ttatttatttatACAATTAATTTTTCATACATCTATTTTTGAATATACATATGCATGTTCAtacatattttctatttatttgtttatttttt-cttccctttatgcactccagagaatttaagtttatcagaacagggaagccaggcgtggtggcgcatgccttt i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150957337 1604 - 180432695 AACATAGTT-AGAGTTCAGTCAACTATA---ATTGCAAAATAGTAGCACTTGTTTGTACTTCATAGTTTACAAGTTCTTTTCACATGTAACATTCAGAATCTTGTAAAATCTTGTGACTTAGGAAGGACACATACATAGTATGAATCTGGTTTAGAGTTGAGGACACAAAGGCCCAAGGATATGCTATCAGAAAGGATCAAAGCCAGAATTTGAATTCAAGGTTTCTGAAtatgaatttcaaatattttctattacatATAACTGGAAAAGAGTATCTGGATTCTTTACCTAATACTACCTGAAATGT-GAGTATACATATTGAATAACCATGATAGGACTATTGGGACTCACCAGTCTCAGGGACCAAActgtggcag-aaaaaaaataacataatgaatcactggtttc--tttttcagagatTTGCTCTTGCAGTCATTGACGATTCTTAGGTGCCAGTCTTCCTGTGCACCGTAACACAGGCTGACAGGTACTGCCTCCCCTCAGAGATCCTAAtctaaaggaagaaatacaatACATATCTGTGCATCTAGAACATGGAGAGGTGCTGTAGCAGGGTGTC----------AAAGAATAAGCCACATAGAGAAGGGAAATCCTGAGAAAATATTGTGGTATATAGTAGATCGCCAGAACTTGGCAGATGCCTGGGGTCCCTTCCCAGTGAAA-AACTTGTCATCTTCGACTAATGCATATAAGATCAGTGGACCTTGTTTTCATCCTTTATAAAACTAATGTGTAGATTTCTAAGACGATTTTTAGCTTCA------CATTATTATTATCCTATACTGTCATACACCTTTGGAGGAGCATCAGTTAGTAAAATC-TTTTTGGAGAACAACTTGCAAAATCAAAAAACCATGT--ACACATTGACTCTGCAATTTCACTGGATCCACTTATTTGCGCCTCTACTATTAGGGCTGGTCAAAATCACAAGCATGTCTTATCTGGACTACTATGGTAGCCTTCTT--AGTGGTCTTCCTGCTTCCACTTCAGTGCCACTACAAGATCTTCTTTCTACAGCGATGGGGGAAATCATCCTAAAAGGCAAATCAGATGGTACTACTTCCCTACTTAAAAATCTCCTCATGATTTATCATAATActtgaaagaaaattcaaatttctcCTCTGACTGACAAAGCCCc-agaagtttgtttttgtttctaatctCAATCATTCCACTGTCTTCCATACACCACACATTGACTACCCtggccttctttctgtttct---acatttgAGCTTTGCACCAGCTGTCCCATCTGCCTCAAATACTC-TTCTGTGCTCATCCATTCAAATTTCAACCTAAATGTCACCTCTTCAAACAGGCTGTACCTGACAACCCAATCTAAATGTGACCACCTAACCAATCTCCAGCATATCACTGTCGTTTTAATTCTCTGTACAGCATTATCCATGATGTGAtactttcc----ttatttatttatacaattaatttttcatacatctattttttaatatacatatgcatgttcatacatattttctatttatttgtttattttttccttccctttatgCACTCCAGAGAACTTAAGTTTATCAGAACAGggaagccaggcgtggtggcacatgccttt i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15046650 1597 - 90373283 aacatagtt-agagctcaatCAACTATA---ATTGCAAAATAGTAGcacttgtttgtacttcatagtttacaagttcttttcacatgtaacattcagaatcttgtaaaatcttgtggcttaggaagaacacatacatattatgaatctggtttagagttgaggacacaaaggcccaaagacatgctatcagaaaggatcaaagccagaacttgaattcaaggtttctgaatctgaatttcaaatattttctattacaTATAACTGGAAAAGACCATCTGGATTCTTTACCTAATACTACCTGAAATGT-GAGTATACATATTGAATAACCATGATAGGACTATTGGAACTCACCAGTCTCAGGGACCAAATTGTGGCAGAAAAAAAAATAACAGAATGAATCACTGGTTTC--TTTTTCAGGGATTTGCTCTTGCAGTCACTGATGATTCTTAAGTGCCAGTCTTCCTGTGCACCCTAACACAGGCTGACAGGTACTGCCTCCCCTCAGAGCTCCTAATCTAAAGGAAGAAATACAATACATATCTGTGCATCTAGAACATGGAGAGGTGCTGTAGCAGGGTGTC----------AAAGAATAAGCCACATAGAGAAGAGAAATCCTGAGAAAATATTGTGGTATATAGTAGATCGCCAGAACTTGGCAGATGCCTGGGGTCCCTTCCCAGTGAAAGAACTTGTCATCTTCGACTAATGCATATAAGATCAGTGGACCTTGTTTTCATCCTTTATAAAACTAATGTGTAGATTTCTAAGATGATTTTTAGCTTCA------CATTATTATTATCCTATactctcatacacctttggaggagcatcagttagtaaaatc-tttttggagaacaacttgcaaaatcaaaaaaccatgt--acacattgactctgcaatttcactGGATccacttatttgcatctctactattagggctggtcaaaatcacaagcatgtcttatctggactactatggtagccttcat--agtggtcctcctgcttccacttcagtgccactacaagatcttctttctacagcgatgggggaaatcatcctaaaaggcaaatcagatggtactacttccctacttaaaaatctcctcatgatttatcataatacttgaaagaaaattcaaatttctcctctgactgacaaagcccc-agaagtttgtttttgtttctaatctcaatcattccactgtcttccatacaccacacatcgactaccctggccttctttctgtttct---acatttgagctttgcaccagctgtcccatctgccccaaataccc-ttctgtgctcatccattcaaatttcaacctaaatgtcacctcttcaaacagg------ctgacaacccaatctaaatgtgactacctaaccaatctccagcatatcactgttgttttaattctctgtacagcattatcc---atgtgatactttcc----ttatttatttatACAATTAATTTTTCATACATCTATTTTTGAATATAAATATGCATGTTCAtacatattttctatttatttgtgtattttttccttccctttatgcactccagagaatttaagtttataagaacagggaagccaggcgtggtggtgcatgccttt i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21945916 1599 + 50472720 aacatagtt-agggctcaatCAACTATA---CTTG-AAAATAGTAGcaattgtttatacttcatagtttacaagttcttttcaaatgtaacattcagaatctcataaaaccttgtgacttaggaaggacatgtacatattattagtctgttttcaagttgaggaaacaaaggcccaaggacatgctatttgaaaggatcaaagccagaacttgaattcaaggtttctgaatctgaatTTCAAATCTTTTCT-TTATATATAACTGGAAAAGATTCTCTGGATTCTTTACCTAATGCTATCGGAAATGT-GAGTGTACATATTGAATAACCATGACAGGCCTACTGAGGCATACTACACTCAGTGACCAAATTGTGGCAG--AAAAAAATAAAATAATGAACAATTGGTTTC-TTTTTTCAGTGATTTGCTCTTGCAGTCACTGATGATTCTTAAGCATCAGTCTTCTTGAGCACCATAACACAGGCTGACAGGTACTGCTTGCACTCAGAGCTCCTAACCTAAAAGAAGAAATACAATACATA-ATGTGGATCTAGAACATGGAGAGGTGCTGTAGT-GGGTGCTAGACAAA--AAAAGAATAAGCCACATAGAGAAGATCAATCCTGAGAAAATATTGTGGTATATAATAGATCACCAGAACTTGACAGATGCCTGGGGTCCCTTCTCTGGGAAAGAACTTGCCATCTTGGACTAATGCATATGAGATCAGTGGACCTTGTTTTCATCCTTTATAAAACCAGTGTGTGGATTTCTACGACAATTTCCAGCTTCATATTATTATTATTATTATCCTATactctcatacatccttggaggggtgtcaattagtaaaatcttttttggagaacaacttgcaaaatcaaaaaaccacat--gcacattgactctgcaatttcactGAATccacttattcccacctctactatgagggctggtcaaagtcacaagcacgccttatctggactactatggtagccttctt--actgctcctcctgcttccacttcagtgccactgcaatctcttctttctacagggatggggacaatcatcctaaaatgcaaatcagatggtactactttcctacttaaaaatatcctcatgatttatcataatacttgaaagaaaattctaatttcttctctgacttacaaagcccc-agaagtctgtctttgtttctgatctaagtcattccactgtcttgcatgtaccatacatcgactacc-tgaccttctttctgtttct---atgtttggaccttgcacaagctgtcccatctccgtcaaataccc-ttctgtgctcatccattcaaatttcaacttaaatgtaacctcttcaaacaggctgtacctgacaacccaatctaaaggtgtctacctagccaatctccagcatatcactgttgttttaattctctgcacagcgttatccacaatgtgatgctttcc----ttat------------ttaatttttcatacatctatttTTGAATATATGTATGAGTGTTCAtatatattttgtatttatt----tattttttccttccctctatgcactccatagaatttaagtttataagagtagggaGGCCACTcatggtggtgcatggctgt i calJac3.chr21 C 0 C 0 s canFam3.chr31 13840424 1518 + 39895921 agcataattaagagctcaatCACCTACAGCTTTTATTAAATGGTAGCACTTAAGCgtacttcagaattcacaagttc-tttcacatctaacattcagaatctcaccaagttttgtgacataggtaagataagtacctactataatcctggtttacagttgaagcaacaaaggcccaaggttacactatgaaaaaaga-aaaagccaaaacttgactccaaagtgtctgaatctgaattccaaatcttttccgctataTAGAGATGGAAGGCATTGTTTTGATTCTCTCCCTAACAGTACCTGAG-----GAATATCAATACTGAATAACCACAGTAGAACTGTTGGGGTTCACTGCTCTCAGTGACCGAATTGTAGTAG--AAATATA-AACATAATGAATGATCAGTTTC-CTTTTTCAGTGATTTTCTCATGTGATCATGGGTAATTTGTAAGCACCAGTCTTGCTCAGCACTGTAACATGGGTTGAC------------------------------------AAGAAATAGGATCTATA-ACATGCATACATAACATGGAGAGGTGTTGCAGAGAAGTGTC-----AGCCAAAAGAACATGCAGCATAGAAAAGAGAAATGCTGAG-AAACATTGTAGTCTGTAATAGTTTACCGGAACCTGGCATATGCCTAGGGTTCCTTCCTAGGAAAGAAACATGTCATTTTGAATTAATGCACATAAAACCAGTGGGTCTTGTTTTCACCTTATGTGAAACTGAATTGTGGATCTCTAA-ACAATGTCCAGCTTTA------CATTGTTATAA---TATactttcacacaccatgtgaggaatgtaaattagtaaaaat-cttttgaggga--atttgcaaaatgaaagaaacacat--acacattgtcccagcaGTTTTGCTGGGTctacttcttttcatctccattattagcactgatcaaagttgccatcatgtcttgcccaaactattccagtaaccttctc--actgagcagcctaattccactctggcaccactacaactcattcttcatacagcaactagagcaatcattctaaaacatacatcagattgtcccactactctcctt-aaaatcccccaatgccttttcatcacacttgggaaaaaggctaaattctttccgcaacttacaaagcgct-agggatttgcctatatttctgatctcaatcataccactttcttgcat--accacacttcaaccactctggtcttctttctgttcctaagacacaagttgtttgctgaagttgttacatatgcctcaaatattctttctctgcttatccatttagatttcaacttaaatgtcac--cttcaaatcgg-tatacctggcaacccaggctata---gactgcctaatcaatctccaggacatcactgttattttaattctctacacagcactct-cattatatgatgctttc-----ttatttacttattcaa----------------caatttttcaatgtatgcatgcatgttggtacatatttagcatttatttatttg--tttcccctccctctacttactccagagaatttaagtttatgagaaaagaga--------------------gcttgt i canFam3.chr31 I 663 C 0 e mm10.chr16 78136405 103 + 98207768 I a score=403963.000000 s hg38.chr21_KI270874v1_alt 109872 149 + 166743 aatcctagcaactcaggaggctgaggcatgagaatcgctggaacctgggaggcagaggttgcagtgagccgagattgtgccactgcactccagcctgggcagtggcagcaagacaccatctc--aaaaataaataaataaaataagaaGTC s panTro4.chr21 3723828 149 + 32799110 aatcctagcaactcaggaggctgaggcatgagaatcgctggaacctgggaggcagaggttgcagtgagccaagattgtgccactgcactccagcctgggcagtggcagcaagacaccatctc--ataaataaataaataaaataagaaGTC i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16986805 149 + 48394510 aatcctagcaactcaggaggctgaggcatgagaatcactggaacctgggaggcagaggttgcagtgagccgagattgtgccactgcactccagcctgggcagtggcagcaagacaccatctc--aaaaataaaTGAATAAAATAAGAAgtc i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4483846 149 + 32716333 aatcccagcaactcaggaggctgaggcatgagaatcgctggaacccgggaggcagaggttgcagtgagccgagactgtgccactgcactccagcctgggcagtggcagcaagacactatctc--aaaaataaataaataaaataagaaGTC i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168599201 151 - 198365852 aatcccagcaactcaggaggctgaggcatgagaatatctggcacttgggaggcagaggttgcagtgagtcaagattgtgccactgcactccagtctgggcagtggcaggaagactccatctcaaaaaaataaataaataaaataagaagtc i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162262962 151 - 192294377 aatcccagcaactcaggaggctgaggcatgagaataactggcacttgggaggcagaggttgcagtgagtcaagattgtgccactgcactccagtctgggcagtggcagcaagactccatctcaaaaaaataaataaataaaataagaaGTC i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150958941 151 - 180432695 aatcccagcaactcaggaggctgaggcatgagaatcactggcacttgggaggcagaggttgcagtgagccaagattgtgccactgcactccagtctgggcagtggcagcaagactccatccccaaaaaataaataaataaaataagaagtc i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15048247 150 - 90373283 aatcccagcaactcaggaggctgaggcatgagaatcactggcacttggga-gcagaggttgcagtgagccaagattgtgccactgcactccagtctgggcagtggcagcaagactccatcccaaaaaCATAAATAAATAATATAAGAAGTC i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21947515 111 + 50472720 aatcccagcaactcaTg-------------------------------------gaagctgcagtgagccaagattgttctactgcactccagcctcgacagtggcagcaagactccatctc--aaaaaaaaattaa-aaaataagaaGTT i calJac3.chr21 C 0 I 296 e canFam3.chr31 13841942 0 + 39895921 C e mm10.chr16 78136405 103 + 98207768 I a score=1201045.000000 s hg38.chr21_KI270874v1_alt 110021 364 + 166743 ctgttccattcacgagtgtatccccagatccaataacaatgcctgactcataattggcacttaatCACTGAATTTTTAATTCTAATAATGTAACCTGTGGGCATTTTTCCATGCACTATGGTTCCAAGTATGCACAAAGAGTAAATTTCCAGCTTCCTTAACTCATGCATTAAGTGCCTACTAGTTGTGATGCCTGAAGAACTGGGAATAAAATCGGTGTGGGATGAATATCAGATGACCTAGAAGAAAATTTGAATTCACATTGAAAAGTGTGAAATT--AAAAAAAAA-----------AGAAAAACACCTaatataaaacaaaattgaaatgttatatagggttcattct---gggcatccaacattc-atctaatgg s panTro4.chr21 3723977 364 + 32799110 ctgttccattcaccagtgtatccccagctccaataacaatgcctgactcataattggcacttaatCACTGAATTTTTAATTCTAATAATGTAACCTGTGGGCATTTTTCCATGCACTATGGTTCCAAGTATGCACAAAGAGTAAATTTCCAGCTTCCTTAACTCATGCAGTAAGTGCCTACTAGTTGTGATGCCTGAAGAACTGGGAGTAAAATGGGTGTGGGATGAATATCAGATGACCTAGAAGAAAATTTGAATTCACATTGAAAAGTGTGAAATT--AAAAAAAAA-----------AGAAAAACACCTaatataaaacaaaatttaaatgttatatagggttcattct---gggcatccaacattc-atctaatgg i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16986954 363 + 48394510 ttgttccattcacgagtgtatcctcagctccaataacaatgcctggctcataattggcacttaatCACTGAATTTTTAATTCTAATAATGTAACCTGTGGGCATTTTTCCATGCACTATGGTTCCAAGTATGCACAAAGAGTAAATTTCCAGTTTCCTTAACTCATGCATTAAGTTCCTACTAGTTGTGATGCCTGAAGAACTGGGAATAAAATGGGTGTGGGATGAATATTAGATGACCTAGAAGAAAATTTGAATTCACATTGAAAAGTGTGAAATT---Taaaaaaa-----------agaaaaacacctaatataaaacaaaatttaaatgttttatagggttcattct---gggcatccagcattc-atctaatgg i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4483995 363 + 32716333 ctgttccattcatgagtgtatccccagctccaataaaaatgcctggctcataattggcacttaatcactgaatttttaaatCTAATAATGTGACCTGTGGGCATTTTTCCATGCACTATGGTTCCAAGTATGCACATAGGGTAAATTTCCAGTTTCCTTAACTCATGCATTAAGTTCCTACTAGTTGTGATGCCTGAAGAACTGGGAATAAAATGGGTGTGGGATGAATATCAGATGACCTAGAAGaaaatttaaattcacattgaaaagtgtgaaatt---aaaaaaaa-----------agaaaaaCACCTaatataaaacaaaatttaaatgttatatagggttcattct---aggcatccaacattc-atctaatgg i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168599352 365 - 198365852 ttgttccattcaccaatgtatccccagctccaataacaatgcctggctcatgactggcacttaatCACTGAATTTTTAATTCTAATAATGTAA-CTATGAGCATTTTTCCATGCACTGTGGTTCCAAGTATGCACATAGACTAAATTTCCAGTTTCCTTAACTCATGTTTTAAGTTCCTACCAGTTGTGATGCCTGAAGAACTGGGAATAAAATGGGTGTGGGATGAACATCAGATGACCTAGAAGAAAATTTGAATTCACACTGAAAAGAGTGAAATTTAAAAAAATAA-----------AGAAAAACACCTAACATAAAACAAAATTGAAATGTTATATAGGGTTCCTTCT---GGGCATCCAACACTC-ATCTAGTGG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162263113 365 - 192294377 ctgttccattcaccagtgtatccccagctccaataacaatgcctggctcatgactggcacttaatCACTGAATTTTTAATTCTAATAATGTAA-CTATGAGCATTTTTCCATGCACTGTGGTTCCAAGTATGCACATAGACTAAATTTCCAGTTTCCTTAACTCATGTTTTAAGTTCCTACCAGTTGTGATGCCTGAAGAACTGGGAATAAAATGGGTGTGGGATGAACATCAGATGACCTAGAAGAAAATTTGAATTCACACTGAAAAGAGTGAAATTAaaaaaaataa-----------agaaaaacacctaatataaaacaaaattgaaatgttatatagggttccttct---gggcatccaacactc-atctagtgg i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150959092 364 - 180432695 cTGTTCCATTCACCAGTGTATCCCCAGCTCCAATAACAATGCCTGGCTCATGACTGGCACTTAATCACTGAATTGTTAATTCTAATAATGTAA-CTATGAGCGTTTTTCCATGCACTGTGGTTCCAAGTATGCACATAGAATAAATTTCCAGTTTCCTTAACTCATGTTTTAAGTTCCTACCAGTTGTGATGCCTGAAGAACCGGGAATAAAATAGGTGTGGGATGAACATCAGATGACCTAGAAGAAAATTTGAATTCACAttgaaaagagtaaaa-taaaaaaaataa-----------agaaaaacacctaatataaaacaaaattgaaatgttATATAGGGTTTCTTCT---GGTCATCTAACATTC-ATCTAGTGg i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15048397 364 - 90373283 ctgttccattcaccagtgtatccccagccccagtaacaatgcctggctcatgactggcacttaatCACTGAATTTTTAATTCTAATAATGTAA-CTATGTGCATTTTTCCATGCACTGTGGTTCCAAGTATGCACATAGACTAAATTTCCAGTTTCCTTAACTCATGTATTAAGTTCCTACCAGTTGTGATGCCTGAAGAACTGGGAATAAAATGGGTGTGGGATGAACATCAGATGACCTAGAAGAAAATTTGAATTCACATTGAAAAGAGTGAAA-TTTTAAAAATAA-----------AGAAAAACACCTaatataaaacaaaattgaaatgttatatagggttccttct---gggcatccaacattc-atctagtgg i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21947922 357 + 50472720 ctgttccattcaccggtgtatccccagctccaataacaatgcctggctcataattggcacttaataaTTGAATTTTTAATTCTAATAATGTAACCTAAGAGCATTTTTTCATGCACTGTCATTCCAAATATGCACATAGAGTAAATTTCCAGTTTCCTTAACTCATGCATTAAGTTCCTACTAGTAGTGATGCCTGAAGAACTGGGAATAAAATGGGTGTGGGATGAATATCAGATGTCCTAGACAAAAATTCGAATTCACATTGAaaagcatgaaa---------gaaa-----------agaaaaacatctaatataaaagaaaatttaaatgttagatagggtttatttt---gggcatccaatattt-atttaatgg i calJac3.chr21 I 296 C 0 s canFam3.chr31 13841942 370 + 39895921 ctattctattca-----------ccagctccaataacaatgcctagcatgtaataggcacttagtcaatgaatatttAGTTCTGGTAATACAACCTATGAGCATTTTTCCATGCATTATGTTTTCAAATAGAGACATAGAGTAAATTTCCAGTTTAACAAATTCACTCATTAAGTTTCTCCTAGTTCTGCTGTTTGAGGAATTAGGAACAAAATGGGTGTGAAATGAATATCAGATGACCTAAAAGAAAACTTGAGTTCACATCCAAGAACACAAAAGGTAAAAAAAAAAAAAAAGTTAAGAAAAAGACATTTAATAAGAAAGAAAATTTAggggtcctagctgggtcagttggtagagcatgtgacatttgatcttgtag i canFam3.chr31 C 0 I 25 e mm10.chr16 78136405 103 + 98207768 I a score=8824.000000 s hg38.chr21_KI270874v1_alt 110385 4 + 166743 aata s panTro4.chr21 3724341 4 + 32799110 aata i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16987317 4 + 48394510 aata i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4484358 4 + 32716333 aata i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168599717 4 - 198365852 aaaa i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162263478 4 - 192294377 aaaa i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150959456 4 - 180432695 aaaa i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15048761 4 - 90373283 aaaa i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21948279 4 + 50472720 aata i calJac3.chr21 C 0 C 0 e canFam3.chr31 13842312 25 + 39895921 I e mm10.chr16 78136405 103 + 98207768 I a score=165359.000000 s hg38.chr21_KI270874v1_alt 110389 72 + 166743 atagaagaaggaacagag-aagacaaaatgaaagaaaaacatc-----------------aaaaaaaaaaaa--aaaaaaaacacagaaaaa------ s panTro4.chr21 3724345 65 + 32799110 atagaagaaggaacagag-aagacaaaatggaagaaaaacatc-----------------aaaaaaaaaaaa--a-------cacagaaaaa------ i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16987321 57 + 48394510 atagaagaaggaacagag-aagacaaaatggaagaaaaac------------------------aaaaaaaa--a--------acagaaaaa------ i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4484362 63 + 32716333 atagaagaaggaacagag-aagacaaaatggaagaaaaacatc-----------------aa--aaaaaaac--a-------cacagaaaaa------ i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168599721 82 - 198365852 atagaagaaggaacagag-aagacaaaatggaagaaaaacacgtttggaagaaaaacacaaaaaaaaaaaaa--a-------aacagaaaaa------ i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162263482 65 - 192294377 atagaagaaggaacagag-aagacaaaatggaagaaaaacacg-----------------aaaaaaaaaaaa--a-------cacagaaaaa------ i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150959460 66 - 180432695 atagaagaaggaacagag-aagacaaaatggaagaaaaacatg----------------aaaaaaaaaaaaa--a-------cacagaaaaa------ i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15048765 68 - 90373283 atagaagaaggaacagag-aagacaaaatggaagaaaaacatg----------------aaaaaaaaaaaaacca-------cacagaaaaa------ i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21948283 57 + 50472720 atagaagaaggaacagag-aagacaaagtggaaaaaaaacaca---------------------taaaaaaa--a-----------gaaaaa------ i calJac3.chr21 C 0 C 0 s canFam3.chr31 13842337 73 + 39895921 atagagaaagaaagaaagaaagaaagaaagaaagaaagaaaga----------------aagaaagaaagaa--a-------gaaagaaagaaaggaa i canFam3.chr31 I 25 I 246 e mm10.chr16 78136405 103 + 98207768 I a score=1302502.000000 s hg38.chr21_KI270874v1_alt 110461 457 + 166743 ttctttgaaagctaaggaaaaaca--agtctccaaaatgaaaagtgcctattaagtcctaagcaggcagaattaaGCTAAGAAAAA--AAAAA-----GTACATGTATTTTCATGAAGGCTCAGATAAATAGGAGATTGTAAACATACCTACACACTCTTCCTAAAAATTACTTGAGGATCCACTCTAGCAAAATAAATAAGAAAATATCAAAAAGTAAAAGACAAGT-------------GGTCCAAAAAATTCTAGAACAACACGGGAGCTCAGTAAAAAGGAGACCCAATATTATGGCTATGAAATAGACTTGAAACCAACGGATACCAATTAGAAAAGCAAATAGGAGAACTCCAG----AAAAAAATGTCTTTAGGACAAAGAATGAAACAGAAATCATAACAGATTATATGTCAAGAATCTAAAAGATCTTAATTAAGTGATAAGTAAAACAACGTAGAAGTCAATTAGAAACtcca s panTro4.chr21 3724410 458 + 32799110 ttctttgaaagctaaggaaaaaca--agtctccaaaatgaaaagtgcctattaagtcctaagcaggcagaattaaGCTAAGAAAAA--AAAAA----AGTACATGTATTTTCATTAAGGCTCAGATAAATAGGAGATTGTAAACATtcctacacactcttcctaaaaattacttgaggatccactctagcaaaataaataagaaaatatcaaaaagtaaaagacaagt-------------ggtccaaaaaattctagaacaacacgggagctcagtaaaaaggagacccaatattatggctatgaaatagacttgaaaccaatggataccaattagaaaagcaaataggagaactccag----aaaaaaatgtctttaggacaaagaatgaaacagaAATCATAATAGATTATATGTCAAGAATCTAAAAGATCTTAATTAAGTGATAAGTAAAACAATGTAGAAGTCAATTAGAAACTGca i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16987378 458 + 48394510 ttatttgaaagctagggaaaaaca--agtctccaaaatgaaaagtgcctattaagtcctaagcaGGCAGAATTAAGCTAAGAAAAA--AAAAAAAAAAGTACATATATTTTCATTAAGGCTCAGATAAAT---AGATTGTAAACATtcctacacactcttcctaaaaattacttgaggatccactctagcaaaataaataagaaaatatcaaaaagtaaaagacaagt-------------agtccaaaaaattgtagaacaacacaggagctcagtaaaaaggagacccaatattatggctatgaaatagacttgaaaccaatggataccaattagaaaagcaaataggagaactccag-----aaaaaatgtcttcaggacaaagaatgaaacagaAATCATAATAGATTATATGTCAAGAATCTAAAAGATCTTAATTAAGTGATAAGTAAAACAATGTAGAAGTCAATTAGAAACtcca i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4484425 457 + 32716333 ttctttgaaagctaaggaaaaaca--agtctccaaaatgagaagtgcctattaagtcctaagcaggcagaattaaGCTAAGAAAAA--AAAAA-----GTACATGTATTTTCATTAAGGCTCAGATAAATAGAAGATTGTAAACATtcctacacactcttcctaaaaattacttgaggatccactctagcaaaataaataagaaaatatcaaaaaataaaacacaagt-------------ggtccaaaaaattgtagaacaacacaggagctcagtaaaaaggagacccaatattatggctataaaatagacttgaaaccaatggataccaattagaaaagcaaataggagaactccag----aaaaaaatgtctttaggacaaagaatgaaacagaAATCATAATAGATTATATGTCAAGAATCTAAAAGATCTTAATTAAGTGATAAGTAAAACAATGTAGAAGTCAATTAGAAACtcca i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168599803 455 - 198365852 TTCTTTGAAAGCTAAAGAAAAACAAGAGTCTCCAAAATGAAAAGTGCCTATTCAGTCCTAAGCAGTCACAATTAAGCTAAG-AAAA--AAAAA-----GTACATGTATTTTCATTAAGGCTCAGATAAATAGAATATTGTAAACATTCTTACACACTCTTCCTAAAAATTACTTGAGGATCCACTCTGGCAAAATAAATAAGAAAATATCAAAAAGTAAAAGACAAGGNNNNNNNNNNNNN----------------GAACAACATAGGAGCTCAATAAAAAGGAGACCCAATATTATGGCTATGAAGTAGACTTGAAACCAATGGATACCGATTAGAAGAGCAAGT---AGAACTCCAG-AAAAAAAAAATGTCTTTAAGACAAAGAATGAAACAGAAATCGTAATAGATTTTATGTCAAGAATCTAAAAGATCTTAATTAAGTGATAAGTAAAACAATGTAGAAGTCAATTAGAAACtcca i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162263547 458 - 192294377 ttctttgaaagctaaagaaaaacaagagtctccaaaatgaaaagtgcctattcagtcctaagcagTCACAATTAAGCTAAG-AAAA--AAAAA-----GTACATGTATTTTCATTAAGGCTCAGATAAATAGAATATTGTAAACATTCTTACACACTCTTCCTAAAAATTACTTGAGGATCCACTCTGGCAAAATAAATAAGAAAATATCAAAAAGTAAAAGACAAGG-------------GGTCCAAAAAATTGCCGAACAACATAGGAGCTCAATAAAAAGGAGACCCAATATTATGGCTATGAAGTAGACTTGAAACCAATGGATACCGATTAGAAGAGCAAGT---AGAACTCCAG-AAAAAATAAATGTCTTTAAGACAAAGAATGAAACAGAAATCGTAATAGATTTTATGTCAAGAATCTAAAAGATCTTAATTAAGTGATAAGTAAAACAATGTAGAAGTCAATTAGAAACtcca i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150959526 458 - 180432695 ttctttgaaagctaaagaaaaacaagagtctccaaaatgaaaagTGCCTATTCAGTCCTAAGCAGTCACAAttaagctaag-aaaa--aaaaa-----gtacatgtatTTTCATTAAGGCTCAGATAAATAGAAGATTGTAAACATTCTTACACACTCTTCCTAAAAATTACTTGAGGATCCACTctggcaaaataaataagaaaatatcaaaaagtaaaagacaagg-------------ggtccaaaaaatTGCAGAACAACATAGGAGCTCAATAAAAAGGAGACCCAATATTATGGCTATGAAGTAGACTTGAAACCAATGGATATTGATTAGAAGAGCAAGT---agaactccag-aaaaaaaaaatgtctttaagacaaagaatgaaacagaaatcaTAATAGATTTTATGTCAAGAATCTAAAAGATCTTAATTAAGTGATAAGTAAAACAATGTAGAAGTCAATTAGAAactcca i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15048833 458 - 90373283 ttctttgaaagctaaagaaaaacaagagtctccaaaatgaaaagtgcctattccgtcctaagcagTCAGAATTAAGCTAAG--AAA--AAAAA-----GTACATGTGTTTTCATTAAGGCTCAGATAAATAGAATATTGTAAACATTCTTACACACTCTTCCTAAAAATTACTTGAGGATCCACTCTGGCAAAATAAATAAGAAAATATCAGAAAGTAAAAGACAAGG-------------GGTCCAAAAACTTGCAGAACAACATAGGAGCTCAATAAAAAGGAGATCCAATATTATGTCTATGAAGTAGACTTGAAACCAATGGATACCAATTAGAAGAGCAAGT---AGAACTCCAGAAAAAAAAAAATGTCTTTAAGACAAAGAATGAAACAGAAATCATAATAGATTTTATGTCAAGAATCTAAAAGATCTTAATTAAGTGATAAGTAAAACAATGTAGAAGTCAATTAGAAACtcca i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21948340 452 + 50472720 ttctttgaaaactaaggaaaaacaagagtctgcaaactgaaaagtccctattaagtcctaagtaggcagaattaaactaagaaaaatgaaaaa-----ggacatgtattttcattaaggctcagataaatagaagattgtaaaTGTtcctacacactcttcccgaaaattactttaggatccactctagcaaactaaataagaaaatatcaaaaagtgaaagataagg-------------ggtccaaaaaacggcagaacaacataggagctaagtaaaaaggagacccagtattctggCTATGAAATAGATTTGAAACCAATGGATAGCGATTAGAAGAGCAAGTAAGAGAACTCCAG-----AAAAAAAGTCTTTAGGACAAAGAATAAAACAG-AATTATAATAGATTATATGTCAATAATCTAAAAGATCTTAAC----TGATAAATAAAACAATGTAGAA---AATTAGAAACTCCA i calJac3.chr21 C 0 I 1 e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78136405 103 + 98207768 I a score=613971.000000 s hg38.chr21_KI270874v1_alt 110918 274 + 166743 gttttagttttctgcatatggctagccagttttcccaacaccatttattaaatagggaatcctttccccattgcttgtttttgtcaggtttgtcaaagatcaggtggttgtagatgtgtggtgttatttctgagggctctgtcctgttccattggtctatatatctgttttggtaccagtaccatgctgttttggttccagtaccatgctgttttggttattgtagaattgtagtatagtttgtagccaggtagcatgatgcctccagctttgt s panTro4.chr21 3724868 252 + 32799110 gttttagctttctgcatatggctagccagttttcccaacgccatttattaaatagggaatcctttccccattgcttgtttttgtcaggtttgtcaaagatcaggtggttgtagatgtgtggtgttatttctgagggctctgtcctgttccattggtctatatatctgttttggtaccagtaccatgctgttttggtt----------------------actgtagaattgtagtatagtttgaagccatgtagcatgatgcctccagctttgt i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16987836 252 + 48394510 attttagttttctgcatatggctaaccagttttcccaacaccatttattaaatagggaatcctttccccattgctggtttttgttaggtttgtcaaagatcaggtggttatagatgtgtggtgttacttctgaggcctctgttctgttccattgatctatatatctgttttggtaccagtaccatgctgttttggtt----------------------actgtagacttgtagtatagtttgaagccaggtagcatgatacctccagctttgt i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4484882 252 + 32716333 gttttagttttctgcatatggctagccagttttcccaacgccatttattaaatagggaatcctttccccattgcttgtttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtgttatttctgaggcctctgttctgttccattggtctatatatctgttttggtaccagtaccatgctgttttggtt----------------------actgtagacttgtagtatagtttgaagccaggtagcatgatgcctccagctttgt i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168600258 252 - 198365852 gttttagttttctgcatatggctagccagttttcccaacaccatttattaaatagggaatccttttcccattgcttgtttttgtcagatttgtcaaagatcagattgttgtagatgtgtggtgttatttctgaggcatctgttctgttccatcggtctatatatctgttttggtaccagtaccatgctgttttggtt----------------------actgtagacttgtaggatagtttgaagccaggtagcatgatggctccagctttgt i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162264005 252 - 192294377 gttttagttttctgcatatggctagccagttttcccaacaccatttattaaatagggaatccttttcccattgcttgtttttgtcagatttgtcaaagatcagattgttgtagatgtgtggtgttatttctgaggcatctgttccgttccatcggtctatatatctgttttggtaccagtaccatgctgttttggtt----------------------actgtagacttgtaggatagtttgaagccaggtagcatgatggctccagctttgt i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150959984 252 - 180432695 gttttagttttctgcatatggctagccagttttcccaacaccatttattacatagggaatccttttcccattgcttgtttttgtcagatttgtcaaagatcagattgttgtagatgtgtggtgttatttctgaggcatctgttctgttccatcggtctatatatctgttttggtaccagtaccatgctgttttggtt----------------------actgtagacttgtaggatagtttgaagccaggtagcatgatggctccagctttgt i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15049291 252 - 90373283 gttttagttttctgcatatggctagccagttttcccaacaccatttattaaatagggaatccttttcctattgcttgtttttgtcagatttgtcaaagatcagattgttgtagatgtgtggtgttatttctgaggcctctgttctgttccatcggtctatatatctgttttggtaccagtaccatgctgttttggtt----------------------attgtagacttgtaggatagtttgaagccaggtagcatgatggctccagctttgt i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21948792 1 + 50472720 I e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78136405 103 + 98207768 I a score=762713.000000 s hg38.chr21_KI270874v1_alt 111192 257 + 166743 AGAATG----CTATACAAGTAATTCATGGTTCAAATATAAAATAAACTAAAATTAAGCATCATTTTGAG-AAAATGATAGaaagacaatccatttaatcttgatatttgaaacaatctatataaaggaggattatttcaatgacttagaattatatttattagctgtaaatccaattacactacctgattttatagtaaataacacttacattttcaaagtattgcaaaactctttgctttcagtattcagaatcagtgtac s panTro4.chr21 3725120 257 + 32799110 AGAATG----CTATACAAGTAATTCATGGTTCAAATATTAAATAAACTAAAATTAAGCATTATTTTGAG-AAAATGATAGaaagacaatccatttaatcttgatatttgaaacaatctatataaaggaggattatatcaatgacttagaattatatttattagctgtagatccaattacactacctgactttatagtaaataacacttacattttcaaagtattgcaaaactctttgctttcagtattcagaatcagtgtac i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16988088 257 + 48394510 AGAATG----CTATACAAGTAATTCATGGTTCAAATATAAAATAAACTAAAATTAAGCATCATTTTGAG-AAAATGATAGAAAGACAATCCATTTAATCTTGATATTTGAAACAATCTATATAAAGGAGGATTATTTCAGTGACTTAGAATTATATTTATTAGCTGCAAATCCATTTACACTACCTGATTTTATAGTAAATAACACTTACATTTTCAAAGTATTGCAAAACTCTTTGCTTTCAGTATTCAGAATCAGTATAC i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4485134 261 + 32716333 AGAATGCTCCCTATACAAGTAATTCATGGTTCAAATATAAAATAAACTAAAATTAAGCATCATTTTGAG-AAAATTATAGAAAGGCAATCCATTTAATCTTGATATTTGAAACAATCTATAAAAAGGAGGATTATTTCAGTGACTTAGAATTATATTTATTAGCTGTAAATCCAATTACACTACCTGATTTTATAGTAAATAACACTTACATTTTCAAAGTATTGCAAAACTCTTCGCTTTCAGTATTCAGAATCAGTGTAC i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168600510 257 - 198365852 AGAATG----CTATACAAGTAATTCATGGTTCATATATAAAATAAACTAAAATTAAGCATCATCTTAAG-AAAATGATAGGaagataatccatttaatcttgatatttgaaacaatctatataaaggaggattatttcagtgacatagaattatatttattagctgtaaatccagttacactacctgattttatagtaaataacagttacattttcaaagtattacaaaactctttgctttcagtattcagaatcagtgtac i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162264257 257 - 192294377 AGAATG----CTATACAAGTAATTCATGGTTCATATATAAAATAAACTAAAATTAAGCATCATCTTAAG-AAAATGATAGGaagataatccatttaatcttgatatttgaaacaatctatataaaggaggattatttcagtgacatagaattatatttattagctgtaaatccagttacactacctgattttatagtaaataacagttacattttcaaagtattacaaaactctttgctttcagtattcagaatcagtgtac i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150960236 257 - 180432695 AGAATG----CTATACAAGTAATTCATggttcatatataaaataaactaaaattaagCATCATCTTAAG-AAAATGATAGGAAGATAATCCATTTAATCTTGATATTTGAAACAATCTATATAAAGGAGGATTATTTCAGTGACATAGAATTATATTTATTAGCTGTAAATCCAGTTACACTACCTGATTTTATAGTAAATAACAGTTACATTTTCAAAGTATTATAAAACTCTTTGCTTTCAGTATTCAGAATCAGTGTAC i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15049543 257 - 90373283 AGAATG----CTATACAAGTAATTCATGGTTCATATATAAAATAAACTAAAATTAAGCATCATCTTAAG-AAAATGATAGGaagataatccatttaatcttgatatttgaaacaatctatataaaggaggattatttcagtgacatagaattatatttattagctataaatccagttacactacctgattttatagtaaataacatttacattttcaaagtattacaaaactctttgctttcagtattcagaatcagtgtac i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21948793 252 + 50472720 AGAATG----CTATACAAGTAACTCATGGTCCAAATATAAACTAAACTAAAATTAAGCATCATTTTGAGAAAAATGATA-AAAGGTAATCCATTTAATCTTGTCATTTGGAACAATCTATATAGAGGAGGATTA--TCAATGACAAAGAATTGTATTTATTGCCTGTAAAGTCAATTACACCACCTGATTATATAGTA---AACATTTACATTTTCAAAGAATTACAAAACTCTTTGGTTTTGATATTCAGAGTCAGTGTTC i calJac3.chr21 I 1 C 0 e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78136405 103 + 98207768 I a score=718768.000000 s hg38.chr21_KI270874v1_alt 111449 236 + 166743 aaagtgcctaaaatgattatatttgcacaataaaatgtaaactttatactttgagagtgAAGATGTAG----TTGACAGGAGTTTAG-AAGTGGAGACTTGTGAGAAGCATGCCAAAAAGTATCAATTTTCTCTTTCTAAATGAAAAAAAGAACTAAAAATTTACA-TTTTGTATCTCGAGTTATAAATGCTACCAATAGAAAAACA---AACATAATATATAATAGGTAAATTAAAGATTCTGA s panTro4.chr21 3725377 236 + 32799110 aaagtgcctaaaataattatatttgcacaataaaatgtaaactttatactttgagagtgAAGATGTAG----TTGACAGGAGTTTAG-AAGTGGAGACTTGTGAGAAGCATGCCAAAAAGTATCAATTTTCTCTTTCTAAATGAAAAAAAGAACTAAAAATTTATA-TTTAGTATCTCGAGTTATAAATGCTACCAATAGAAAAACA---AACATAATATATAATAGGTAAATTAAAGATTCTGA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16988345 236 + 48394510 AAAGTGCCTAAAATAATTATATTTGCACAATAAAATGTAAACTTTATACTTTGAGAGTGAAGATGTAG----TTGACAGGAGTTTAG-AAGTGGAGACTTGTGAGAAGCACGCCAAAAATTATCAATTTTCTCTTTCTAAATGAAAAAAAGAACTAAAAATTTATA-TTTAGTATCTCAAGTTATAAATGCTACCGATAGAAAAACA---AACATAATACATAATAGGTAAATTAAAAATTCTGA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4485395 236 + 32716333 AAAATGCCTAAAATAATTATATTTGCACAATAAAATGTAAACTTTATACTTTGAGAGTGAAGATGTAG----TTGACAGGAGTTTAG-AAGTGGAGACTTGTGAGAAGCATGCCAAAAAGTATCAATTTTCTCTTTCTAAATGAAAAAAAGAACTAAAAATTTATA-TTTAGTATCTCAAGTTATAAATGCTACCAATAGAAAAATA---AACATAATATATAATAGGTAAATTAAAGATTCTGA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168600767 237 - 198365852 aaagtgcctaaaataattatatttgcataataaaatgtaaactttatactttgagagtgAAGATGTAG----TTCACAGAAGTTTAGAAAGTGGAGACTTGTGAGAAGCATGCCAAAAAGTATCAATTTTCTCTTTCTAAATG-AAAAAGGAACTAGAATTTTATATTTTAGTGTCTCAAGTTATAAATACTACCAATAGAAAAAGA---AACAAAAtatataataggtaaattaaagattctga i rheMac3.chr3 C 0 I 3 s macFas5.chr3 162264514 236 - 192294377 aaagtgcctaaaataattatatttgcataataaaatgtaaactttatactttgagagtgAAGATGTAG----TTGACAGGAGTTTAGAAAGTGGAGACTTGTGAGAAGCATGCCAAAAAGTATCAATTTTCTCTTTCTAAATG-AAAAAGGAACTAGAATTTTATA-TTTAGTGTCTCAAGTTATAAATACTACCAATAGAAAAAGA---AACAAAAtatataataggtaaattaaagattctga i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150960493 236 - 180432695 AAAGTgcctaaaataattatatttgcataataaaatgtaaactttataCTTTGAGAGTGAAGATGTAG----TTGACAGGAGTTTAGAAAGTGGAGACTTGTGAGAAGCATGCCAAAAAGTAtcaattttctctttctaaatg-aaaaaagaactagaattttata-tttagtgTCTCAAGTTATAAATACtaccaacagaaaaaga---aacaaaatatataataggtAAATTAAAGATTCTGA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15049800 236 - 90373283 aaagtgcctaaaataattatatttgcataataaaatgtaaactttatactttgagagtgAAGATGTAG----TTGACAGGAGTTTAGAAAGTGGAGACTTGTGAGAAGCATGCCAAAAAGTATCAATTTTCTCTTTCTAAATG-AAAAAAGAACTAGAATTTTATA-TTTAGTGTCTCAAGTTATAAATGTTACCAATAGAAAAAGA---AACAAAATATATAATAGGTAAATTAAAGATTCTGA i chlSab2.chr2 C 0 I 3 s calJac3.chr21 21949045 209 + 50472720 AAAGTGCCTAAAATAATTATATTTGCATAATACAATATAAACTTTATACTTCAAGAGTAAAGATGTAG----TTGAC---AGTTTAG-----------------------TGCCAGAAAGTATGCATTTTTTCTTTCTACAT--AAAAAAGAACTAGAAATTTATA-TTTAGTATCTAGAGATATAAATGCTACCAATAGAAAAACA---AACACAAtatataattggtaaattaaagattctga i calJac3.chr21 C 0 C 0 s mm10.chr16 78136508 224 + 98207768 AAGGTACCTAAAGGAATGATGTGTGCATAGTGTGGCTTCCTCTTTAGAATTTGACAGTAAAGTTGCAGGTACTTGGCAGCACTTTAGAAAGTAAAGACTCATGGAAAAAGTG------AATAGTTCTTTTTAGTTTCCACATG-AAAAAATATTATGACATTTACA-CTTAGTTCTGAAAGTTATAATTGGTACCAAAAAAAAAAAAATGAACGTGATACTCATTTGGTAAA------------- i mm10.chr16 I 103 C 0 e canFam3.chr31 13842410 246 + 39895921 I a score=-267.000000 s hg38.chr21_KI270874v1_alt 111685 10 + 166743 TTCCTGTTTG s panTro4.chr21 3725613 10 + 32799110 TTCCTGTTTG i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16988581 10 + 48394510 TTCCTGTTTG i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4485631 10 + 32716333 TTCCTATTTG i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162264750 3 - 192294377 --act----- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150960729 3 - 180432695 --ACT----- i papAnu2.chr3 C 0 C 0 s calJac3.chr21 21949254 3 + 50472720 --act----- i calJac3.chr21 C 0 C 0 e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78136732 0 + 98207768 C e rheMac3.chr3 168601004 3 - 198365852 I e chlSab2.chr2 15050036 3 - 90373283 I a score=743672.000000 s hg38.chr21_KI270874v1_alt 111695 232 + 166743 ATCCAGAATcaaacaggaatgattttcctctgaaagttgccttcagtcatactctgaggtttctctttccttccattactaatatc--tgagcacatcctttggctctctggtcactttcacttaCAGAAACAAACGTAATTTTGTAATAAAAGACTTATGTTGAAAAGGTATACTTTTGTCTAAATCAGAATTTCAAATTTGTATCCAATTCAAACATCTCCCTTTATCTCAA s panTro4.chr21 3725623 232 + 32799110 ATCCAGAATcaaacaggaatgattttcttctgaaagttgccttcagtcatactctgaggtttctctttccttccattactaatatc--tgagcacatcctttggctctctggtcactttcatttaCAGAAACAAACATAATTTTGTAATAACAGACTTATGTTGAAAAGGTATACTTTTGTCTAAATCAGAATTTCAAATTTGTATCCAATTCAAACATCTCCCTTTATCTCAA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16988591 232 + 48394510 ATCCAGAATCAAACAGGAATGATTTTCCTCTGAAAGTTGCCTTCAGTCATACTCTGAGGTTTCTCTTTCCTTCCATTACTAATATC--TGAGCACATCCTTTGGCTCTCTGGTCACTTTCACTTATAGAAACAAACGTAATTTTGTAATAACAGACTTGTGTTGAAAAGGTATACTTTTGTCTAAATCAGAATTTCAAATTTGTATCTAATTCAAACATCTCCCTTTATCTCAA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4485641 232 + 32716333 ATCCAGAATCAAACAGGAATGATTTTCGTCTGAAAGTtgccttcagtcatactctgaggtgtctctttccttccattactaatatc--tgagcacatcctttgcctctctggtcactttcacttatAGAAACAAACGTAATTTTGTAATAACAGACTTCTGTTGAAAAGGTATACTTTTGTCTAAATCAGAATTTCAAATTTGTATCCAATTCAAACATCTCCCTTTATCTCAA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168601007 232 - 198365852 acccagaatcaaacaggaatgattttccttggaaagttgccttcagtcatactctgaggtttctctttccttccgttactaatatc--tgagcacatcctttggctctctggtcactttcacttatAGAAACAAACCTAATTTTCTAATAAAAGACTTATGTTGAAAAGGTATACTTTTGTCTAAATCAGAATTTCAAATTTGTATCCAATTCAAACATCTCCCTTTATCTCAA i rheMac3.chr3 I 3 I 321 s macFas5.chr3 162264753 232 - 192294377 acccagaatcaaacaggaatgattttccttggaaagttgccttcagtcatactctgaggtttctctttccttccgttactaatatc--tgagcacatcctttggctctctggtcagtttcacttatAGAAACAAACCTAATTTTCTAATAAAAGACTTATGTTGAAAAGGTATACTTTTGTCTAAATCAGAATTTCAAATTTGTATCCAATTCAAACATCTCCCTTTATCTCAA i macFas5.chr3 C 0 I 319 s papAnu2.chr3 150960732 232 - 180432695 ACCCCGAATCAAACAGGAATGATTTTCCTTGGAAAGTTGCCTTCAGTCATACTCTGAGGTTTCTCTTTCCTTCCGTTACTAATATC--TGAGCACATCCTTTGGCTCTCTGGTCACTTTCACTTATAGAAACAAACctaattttgtaataaaagaCTTATGTTGAAAAGGTATACTTTTGTCTAAATCAGAACTTCAAATTTGTATCCAATTCAAACATCTCCCTTTATCTCAA i papAnu2.chr3 C 0 I 1 s chlSab2.chr2 15050039 232 - 90373283 ACCCAGAATCAAACAGGAATGATTTTCTTTGGAAAGTtgccttcagtcatactctgaggtttctctttccttccgttactaatatc--tgagcacatcctttggctctctggtcactttcacttatAGAAACAAACCTAATTTTGTAATAAAATACTTATGTTGAAAAGGTATACTTTTGTCTAAATCAGAATTTCAAATTTGTATCCAATTCAAACATCTCCCTTTATCTCAA i chlSab2.chr2 I 3 I 1 s calJac3.chr21 21949257 232 + 50472720 acccagaatcaaataggaataatttttctctgaaagttgccttcagtcatactttgagatttttctttcctcccattactaatatc--tgagcacatcctttggctctctggtcattttcacttaCAGAAACAAACCTAATTTTGTAATAACAGACTTATGTCGAAAAGGTATACTTCTGTCTAAATCAGAATTTCAAATTCGTATCCAATTCAAACATCTCCCTTTATTTCAA i calJac3.chr21 C 0 C 0 s mm10.chr16 78136732 176 + 98207768 AGTTGGAGCTAGTCAGGAACCCATCTCTGTGAGAA------------------------------TCCCCTTATATTACTAATATCCTTTAGTGAATGC-TTAGCTCTCAGGTT-TTGTTTCTTTCAGAAACAGGC-----TTTGCAA-------------TTTAAAAGATAAACTT--------GTCACCATACCAAATCAATATCCAATTCAAAGTACCCCGTTGCCTTTAA i mm10.chr16 C 0 C 0 e canFam3.chr31 13842410 246 + 39895921 I a score=1362.000000 s hg38.chr21_KI270874v1_alt 111927 2 + 166743 GC s panTro4.chr21 3725855 2 + 32799110 GG i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16988823 2 + 48394510 GG i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4485873 2 + 32716333 GG i nomLeu3.chr25 C 0 C 0 s calJac3.chr21 21949489 2 + 50472720 GG i calJac3.chr21 C 0 C 0 s mm10.chr16 78136908 2 + 98207768 GA i mm10.chr16 C 0 C 0 e canFam3.chr31 13842410 246 + 39895921 I e rheMac3.chr3 168601239 321 - 198365852 I e chlSab2.chr2 15050271 1 - 90373283 I e macFas5.chr3 162264985 319 - 192294377 I e papAnu2.chr3 150960964 1 - 180432695 I a score=1064279.000000 s hg38.chr21_KI270874v1_alt 111929 343 + 166743 CCCTTCTTTAGCAAGCTCTGAGCCTTGGGTCAAAGGAGAAGCTTTCATT--CAACATCC----------TGTTACAAATGTAATCAACAAAACTTgggggaggaat----ggggaagtataaattagataaatttaccatcttttataccatgaaatctattactactcttataaagttaacatatcaagaaatagaggtataagtacactgctgaaaattatgatagtaaccactacaacacctaaaaacagaaataagtagttaccctatagagtgggactgtgaACAGGTGATTTTT-TCCTTCCATTTAATAATACCTTGTAGCCTATGACCATAGTTATGCTGAACATATATGAC s panTro4.chr21 3725857 343 + 32799110 CCCTTCTTTAGCAAGCTCTGAGCCTTGGGTCAAAGGAGAAGCTTTCATT--CAACATCC----------TGTTACAAATGTAATCAACAAAACTTgggggaggaat----ggggaagtataaattagataaatttaccgtcttttataccatgaaatcaattactactgttataaagttaacatatcaagaaatagaggtataagtacactgctgaaaattatgatagtaaccactacaacacctaaaaacagaaataagtagttaccctatagagtgggactgtgaACAGGTGATTTTT-TCCTTCCATTTAATAATACCATGTAGCCTATGACCATAGTTATGCTGAACATATATGAC i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16988825 343 + 48394510 CCCTTCTTTAGCAAGCTCTGAGCCTTGGGCCAAAGGAGAAGCTTTCATT--CAACATCC----------TGTTACAaatgtaatcaacaaaacttggcggaggaat----ggggaagtataaattagataaatttatcatcttttataccatgaaatcaatcactactgttataaagttaacatatcaagaaatagaggtataagtatactgctgaaaattatgatagtaaccactacaacacctaaaaacagaaataagtagttaccctatagagtgggaCTCTGAACAGGTGATTTTT-TTCTTCCATTTAATAATACCATGTAGCCTATGACCATAGTTTTGCTGAACATATATTAC i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4485875 343 + 32716333 CCCTTTTTTAGCAAGCTCTGAGCCTTGGGTCAAAGGAGAAGTTTTCATT--CAACACCC----------TGTTACAAATGTAATCAACAAAACTTgggggaggaat----ggggaattataaactagataaatttatcatcttttataccatgaaatcaattaccactgttataaagttaacatatcaagaaatagaggtataagtacactgctgaaaattatgatagtaaccactacaacacctaaaaacagaaataagtagttaccctatagagtgggactgtgaAGAGTTGATTTTT-TCCTTCCATTTAATAATACCATGTAGCCTATGACCATAGTTATGCTGAACATGTATTAC i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168601560 340 - 198365852 CCCTTCTTTAGCAAGCTCTAAGCCTTGGGTCAAAGGAGAAGCTTTCATT--CAACATCC----------TGTTACAAATGTAATCAACAAAACTTgaaggaggaat----ggggaagtataaattagataaatgtatcatcttgtataccataaaatcaattactactgctataaagttaacatatcaagaaatagaggtataagtacactgtggaaaattatgatagtaaccactgcaatacctaaaaacagaaataagtagttaccctatagagtgggactgtgaACAGGTGATTTTT----TTCCATTAAATAATACCACGTAGCCTATAACCATAGATGCACTGAACATATATTAC i rheMac3.chr3 I 321 C 0 s macFas5.chr3 162265304 344 - 192294377 CCCTTCTTTAGCAAGCTCTAAGCCTTGGGTCAAAGGAGAAGCTTTCATT--CAACATCC----------TGTTACAAATGTAATCAACAAAACTTgaaggaggaat----ggggaagtataaattagataaatgtatcatcttgtataccataaaatcaattactactgctataaagttaacatatcaagaaatagaggtataagtacactgtggaaaattatgatagtaaccactgcaatacctaaaaacagaaataagtagttaccctatagagtgggactgtgaACAGGTGATTTTTTTCCTTCCATTAAATAATACCACGTAGCCTATAACCATAGACGCACTGAACATATATTAC i macFas5.chr3 I 319 C 0 s papAnu2.chr3 150960965 343 - 180432695 CCCTTCTTTAGCAAGCTCTGAGCCTTGGGTCAAAGGAGAAGCTTTCATT--CAACATCC----------TGTTACAAATGTAATCAACAAAACTTGAAGGAGGAAT----GGGGAAGTATAAATTAGATAAATGTATCATCTTGTATACCATGAAATCAATTACTACTGCTATAAAGTTAACATATCAAGAAATAGAGGTATAAGTACACTGTGGAAAATTATGATAGTAACCACTGCaatacctaaaaacagaaataagtagTTACCCTATAGAGTGGGACTGTGAACAGGtgattttt-tccttccatttaatAATACCGTGTAGCCTATAACCATAGACAAACTGAACATATATTAC i papAnu2.chr3 I 1 C 0 s chlSab2.chr2 15050272 343 - 90373283 CCCTTCTTTAGCAAGCTCTGAGCCTTGGGTCAAAGGAGAAGCTTTCATT--CAACATCC----------TGTTACAAATGTAATCAACAAAATTTgaaggaggaat----ggggaagtgtaaattagataaatgtatcatcttgtataccatgaaatcaattactactgctataaagttaacatatcaagaaatagaggtataagtacactgtggaaaattatgatagtaaccactgcaatacctaaaaacagaaataagtagttaccctatagagtgggactgtgaACAGGTGATTTTT-TCCTTCCATTTAATAATACCGTGTAGCCTATAACCATAGACAAACTGAACATATATTAC i chlSab2.chr2 I 1 C 0 s calJac3.chr21 21949491 343 + 50472720 CCCTTCTTTAACAAGCTCTAAGCCTGTGGTCAAAGGAGAAGCTTTCATT--CAACATCC----------TGTTACAAGTGTAATCAACAAAACTTGGGAGGAAAAT----AgggaagtataaattagataaatttctcctcttttatatcattaaatcaattactactattataaagttaacatatcaagaaatagaagtataagtacactgcagaaaattatgaaggtaaccactacaacacctaaaagcagaaataagcagttcccctagagagtgggactgtgaaCAAGTGATTTTT-TTCTTCCATTTGATAATATTATGTAGCCTATGACCATAGTTACCCTGAACATATATTAC i calJac3.chr21 C 0 C 0 s mm10.chr16 78136910 332 + 98207768 ACTTTGTGTAGCAGGCTCTAAACTT--AGTCAACTGATGCATTTCCCTCAGCCGCATTCCATAATGGGGCATTTCAAATTCAATGACTAATTCTTGGTGGTGGGTCGCTAGAAAAAGAATGTGGGAGGTCAATGTGTAGTTCTCCATTCCTTGACATCATATGCCTCCATT-TATTGTTAATAGATCACGAAAGAAAAGCACATTGACAT--ATAAACATTGTAATAGCAACCACCAAGAAATC------CAGAGATAACTGCTCATACCATGAAG---------------ATGGCTTTT-CCTATCCATTACAAATTATTACATACCCTATAGCCATA-TTACCCTGTGTGTATATTAC i mm10.chr16 C 0 I 89 e canFam3.chr31 13842410 246 + 39895921 I a score=1979365.000000 s hg38.chr21_KI270874v1_alt 112272 693 + 166743 ATTCATATGAATAAACAAGTGATGAAAGAAATaataaagcacaatgttagaagaagggagtagttaagattgtcagatcatcaaatttctttgaggagtcaaagtaaaataagaattgaaaataatcatgggatttagcaacatgaaggtcattgttcacattaactaagaaaattttactggagtggccaggcgcagtggctcacacctataatctcagcactttgggagacctgggcaggtggatcccttgagctcaggagttcgagaccaacctgggcaacatgacaaaaccccatctctataaaacaaacaaacaaacaaaaaatcagccaggtattgtggcatgcacgcatagtctcatctactcggggagctgaggtgggaggatcacttgatccaccgggtggttgaggttgcagtgagccgagatagcaccactgcactccagcctggacgataga----gtgagactttgtctcaaaaacaagaaaataaaagaaaattttactggaataattggtgtagg---------tgaagtaggctgagaatgagtaagcagtgagaaatacaagacaacaaatactaactctctcaagatatttggcttcaaggaggagaatagaaatagggctatagtttgaaagtggagtacatactacttgcagtctttgacatttttattttaagataagagatact s panTro4.chr21 3726200 697 + 32799110 ATTCATATGAATAAACAAGTGATGAAAGAAATaataaagcacaatgttagaagaagggagtagttaagattgtcagaccatcaaatttctttgaggagtcaaagtaaaataagaattgaaaataatcatgggatttagcaacatgaaggtcattgttcatattaactaagaaaattttactggagtggccaggcgcagtggctcacacctataatctcagcactttgggagacctgggcaggtggatcccttgagctcaggagttcgagaccaacctgggcaacatgacaaaaccccatctctataaaacaaacaaacaaacaaaaaatcagccaggtattgtggcatgcacccatagtctcatctactcggggagctgaggtgggaggatcacttgatccgccgggtggttgaggctgcagtgagccgagatagcaccactgcactccagcctggacgatagatagagtgagactttgtctcaaaaacaagaaaataaaagaaaattttactggaataattggtgtagg---------tgaagtaggctgagaatgagtaagcagtgagaaatacaagacattaaatactaactctctcaagatatttggcttcaaggaggagaatagaaatagggctatagtttgaaagtggagtacatactacttgcagtctttgacatttttattttaagataagagacact i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16989168 693 + 48394510 ATTCATACAAATAAACAAATGATGAAAGAAATAATAGGGCACaatgttagaagaagggagtagttaagattgtcagaccatcaaatttctttgaggagtcaaagtaaaataagaattgaaaataatcatgggatttagcaacatgaaagtcattgttcatattaactaagaaaattttactggactggccaggcacagtggctcacacctataatctcagcactttgggagacctgggcaggtggatcccttgagctcaggagttcgagaccaacctgggcaacatgacaaaaccccatctctata----aaacaaacaaacaaaaaatcagccgcgtgtggtggcatgcacccatagtcccgtctactcggggagctgaggtgggaggatcacttgatctgctgggtggttgaggctgcagtgagctgagatagcaccactgcactccagcctggacgatagatagagtgagattttgtctcaaaaacaagaaaataaaagaaaattttactggagtaattggtgtagg---------tgaagcaggttgagaatgagtaagcagtgagaaatacaagacattaaataccaactctctcaagatatttggcttcaaggaggagaatagaaatagggctatagtttgaaagtgaagtacatactacttgtagtctttgccatttttattttaagataagagatact i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4486218 692 + 32716333 ATTCATACGAAAAAACAAATGATGAAAGAAATaataaagcacaatgttagaagaagggagtagttaagattgtcagaccatcaaatttctttgaggagtcaaagtaaaataagaattgaaaataatcatggaatttagtaacatgaaggtcattgttcatattaactaagaaaattttactggagtggccaggtgcagtggctcacacctgtaatctcagcactttgggagacctgggcaggtggatcccttcagctcaggagttcgagaccaacccgggcaatatgacaaaaccccatctctata----aaacaaacaaacaaaaaatcagccgggtgtggtggcatgcacccatagtcccatctactcggggagctgaggtgggaggatcacttgatccgctgggtggttgaggctgcagtgagctgagatagcaccactgcactccagcctggatgatagatagagtgagactttgtctcaaaaacaagaaaataaaagaaaattttactggag-aattggtgtagg---------tgaagcaggctgagaatgagtaagcagtgagaaatacaagacattaaataccaactctttcaagatatttggcttcaaggaggagaatagaaatagggctatagtttgaaagtggagtacatactatttacagtctttgccatttttattttaagataagagatact i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168601900 682 - 198365852 ATTCATACTAATAAACAAATGATGAAAGAAATaataaagcacaatgttagaagaagggagtagttaagattgtcagaccatcaaatttctttgaggagtcgaagtaaagtaagaattgaaaacaatcatggaatttagcaacatgaaggtcattgttcctattaactaagaaaattttattggagtggccaggtgcagtggctcacacctataatctcagcactttgggagacctgtgcaggtggatcccttgagcgcaggagttcgagactaacctgggcaacatgacaaaaccccatctctatt-------aaaaaaaaaaaaaaatcagccgggcatgggggcatgcaccca--------cctactgggggagctgaggtgggaggatcacttgagccaccgggtggctgaggatgcagtgagccgagatagcaccactgcactccagcctgggcaatacatagagtgagaccttgtctcaaaaacaagaaaagaaaagaaaattttactggagtaattggtgtagg---------tgaagcaggcagagaatgagtaagcagtgagaaatacaagacagtaaataccaactctctcaagatctttggcttccaggaggagaaaagaaagagggcaatagtttgaaagtggaatgcatactacttgtagtctttgccacttttattttaagacaagagatact i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162265648 680 - 192294377 ATTCATACTAATAAACAAATGATGAAAGAAATaataaagcacaatgttagaagaagggagtagttaagattgtcagaccatcaaatttctttgaggagtcgaagtaaaataagaattgaaaacaatcatggaatttagcaacatgaaggtcattgttcctattaactaagaaaattttattggagtggccaggtgcagtggctcacacctataatctcagcactttgggagacctgtgcaggtggatcccttgagcgcaggagttcgagactaacctgggcaacatgacaaaaccccatctctatt---------aaaaaaaaaaaaatcagccgggcatgggggcatgcaccca--------cctactgggggagctgaggtgggaggatcacttgagccaccgggtggctgaggatgcagtgagccgagatagcaccactgcactccagcctgggcaatacatagagtgagaccttgtctcaaaaacaagaaaagaaaagaaaattttactggagtaattggtgtagg---------tgaagcaggcagagaatgagtaagcagtgagaaatacaagacagtaaataccaactctctcaagatctttggcttccaggaggagaaaagaaagagggcaatagtttgaaagtggaatgcatactacttgtagtctttgccacttttattttaagacaagagatact i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150961308 682 - 180432695 ATTCATACTAATAAacaaatgatgaaagaaataataaagcacAATGTTAGAAGAAGGGAGTAGTTAAGATTGTCAGACCATCAAATTTATTTGAGGAGTCGAAGTAAAATAAGAATTGAAAACAATCATGGAATTTAGCAACATGAAGGTCATTGTTCCTATTAACTAAGAAAATTTTATTggagtggccaggtgcagtggctcacacctataatctcagcactttgggagacctgtgcaggtggatcccttgagcgcaggagtttgagactaacctgggcaacatgacaaaaccccatctctatt-------aaaaaaaaaaaaaaatcagccgggcatgggggcatgCACCCA--------TCTActgggggagctgaggtgggaggatcacttgagccaccGGGTggctgaggatgcagtgagccgagatagcaccactgcactccagccagggcaatacatagagtgagaccttgtctcaaaaacaagaaaagaaaagaaaattttactggAGTAATTGGTGTAGG---------TGAAGCAGGTAGAGAATGAGTATGCGGTGAGAAATACAAGACAGTAAATACCAACTCTCTCAAGATCTTTGGCTtccaggaggagaaaagaaagagggctATAGTTTGAAAGTGGAATACATACTACTTGTAGTCTTTGCCACTTTTATTTTAAGACAAGAGAtact i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15050615 687 - 90373283 ATTCATACTAATAAACAAATGATGAAAGAAATaataaagcacaatgttagaagaagggagtagttaagattgtcagaccatcaaatttcttggaggagtcaaagtaaaataagaattgaaaataatcatggaatttagcgacataaaggtcattgttcctattaactaagaaaattttattggagtggccaggtgcagtggctcacacctataatctcagcactttgggagacctgtgcaggtagatcccttgagcgcaggagttcgagactaacctgggcaacatgacaaaaccccatctctatt--ttaaaaaaaaaaaaaaaaaatcagccaagcatgggggcatgcaccca--------tctactgggggagctgaggtgggaggatcacttgagccaccgggtggctgaggatgcagtgagccgagatagcaccactgcactccagcctgggcaatacatagagtgagaccttgtctcaaaaacaagaaaagaaaagaaaattttactggagtaattggtgtagg---------tgaagcaggcagagaatgagtatgcggtgagaaatacaagacagtaaataccaactctctcaagatctttggcttccaggaggagaaaagaaagagggctatagtttgaaagtgaaatacatactacttgtagtctttgccactttcattttaagacaagagatact i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21949834 676 + 50472720 ATTCTTACTAATAAACAAATGATGAAAGTAATTATAAAGCACAATGGTagaagaagggattcgttaagactgtcagaccatcaaat-----------atcagagtaaaagaaaaattgaaaataatcatgaaatttagtaacatgaaggtcattatttatattaaccaagaaaattttactggagtggccaggcacagtggctcacacctataatcacagcacttcgggagacctggacaggcagatcccttgagctcaggaattcgagactaacctgggcaacatgatagaacaccatctctatt-------------ttaaaaaaaacagctgggtgtggtagcatgcatccacagtcccagctactcaggaagttgaggtgggaggatcacttgagccac-aggtgattgaggctgcagtgagccaagattgcaccacttt-ttccagcctgggtgataga----gtgagaccttgtctcaaaaaaaaggaaagaaaagaaaattttactgaagtaatgagtgaaggtgccaaaattgaagcaggttgagaatgagtaagcagtgagaaatacaagacagtaaatatcaactctctcaagatatttggcttcaaggagaagaatagaaatagggctgtagttagaaagtggaggtcatactacttgcagtctttgccatttttagtttaagataagagatact i calJac3.chr21 C 0 C 0 e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78137242 89 + 98207768 I a score=1921641.000000 s hg38.chr21_KI270874v1_alt 112965 590 + 166743 taaacacatttaaatgtacatggaaatgattgagtagaggaatcctggtttagtgactggggaaagagaaggtaagcta----------ataagtttcctg----------------------------------------agaaggatagcaggaatataatcagaag-caagagatggaagactggaccttagctagaaagaagaatagtac-tatcttgtacaagagaac-tgaagacaaaatgaaggtagatacatccgtctatgagtacatgaatagatttggtgacaaaaagttgagaagactcacccagtggtttttatatactctgtgaag-aatgtaacaaagttacatgcagaagtttgaggagagtagaaaagttgtgaaata-ttttttgcacagaatgggagagggttgaccagtaaagtgtagcaggctcactggtcaatattaaggtccaagtaaggaactaatgaatggaagttgaaagcactatgctgagttcattattttctct--------atgagtgctcgtttgcttatgcacattcttagagaaaccaggtatttcaggtgatgaagggctggtactttgccagagagaagtgatgaaagacagaagggcaaggcaattTTGCCTATTTTT s panTro4.chr21 3726897 590 + 32799110 taaacacatttaaatgtacatggaaatgattgagtagaggaatcctggtttagtgactggggaaagagaaggtaagcta----------ataagtttcctg----------------------------------------agaaggatagcaggaatataatcagaag-caagagatggaagactggaccttagctagaaagaagaatagtac-tatcttgtacaagagaac-tgaagacaaaatgaaggtagatacatccatctatgagtaaatgaatagatttggtgacaaaaagttgagaagactcacccagtggtttttatatactctgtgaag-aatgtaacaaagttacatgcagaagtttgaggagagtagaaaagttgcgaaata-ttttttgcacagaatgggagagggttgaccagtaaagtgtagcaggctcactggtcaatattaaggtccaagtaaggaactaatgaatggaagttgaaagcaatatgctgagttcattattttctct--------atgagtgctcgtttgcttatgcacattcttagagaaaccaggtatttcaggtgatgaagggctggtgctttgccagagagaagtgatgaaagacagaagggcaaggcaattTTGCCTATTTTT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16989861 591 + 48394510 taaacacatttaaatgtacatggaaatgattgagtagagaaaacatggtttagtgactggggaaagagaaggtaagcta----------ataagtttcctg----------------------------------------aggaggatagcaggaatataatcagaag-caagagacggaagactggaccttagctagaaagaagaatagtac-tatcttgtacaagagaac-tgaagacaaaatgaagctagatgcatccatctatgagtaaatgcatagatttggtgacaaaaagttgagaagactcacccagtggtttttatatactctgtgaag-aatgtaacaaagttacatgcaaaagtttgaggagagtagaaaagctgtgaaatatttttttgcacagaatgggagagggttgaccagtaaagtgtagcaggctcactggtcaatattaaggtccaagtaaggaactaatgaatggaagtcgaaagcaatacgctgagttcattattttctct--------aggagtgtttgtttgcttatgcacatgcttagagaaaccaggtatttcaggtgatgaagggctgatgctttgccagagagaagtgatgaaagacagaagggcaaggcaattTTGCCTATTTTT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4486910 590 + 32716333 taaacacatttaaatgtacatggaaatgattgagtagaggaatcatggtttagtgactggggaaagagaaggtaagtta----------ataagtttcctg----------------------------------------agaaggatagcaggaatataatcagaag-caagaggtggaagactggaccttagctagaaataagaatattac-tgtcttgtacaagagaac-taaagacaaaatgaaggtagatgcatccatctatgattaaatgcatagatttggtgacgaaaagttgaaaagactcacccagtggtttttatatactctgtgaag-aatgtaacaaagttacatgcagaagtttaaggagagtagaaaagttgtgaaata-ttttttgcacagaatgggagagggttggccagtaaagtgtagcaggctcactggtcagtattaaggtccaagtaaggaactaatgaatgggagttgaaagcaatatgctgagttcattattttctct--------aggagtgctcgtttgcttatgcacatgcttagagaaaccaggtatttcaggtgatgagggactggtgctttgccagagagaagtgatgaaagacaaaagggcaaggcaattTTGCCTATTTTT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168602582 589 - 198365852 taaacacatttaaatatacatggaaacgattgagtagaggaatcatggtttagtgacttgggaaagagaaggtaagcta----------ataagtttcctg----------------------------------------agaaggatagcagggatataatcagaag-caggaggtggaagactaaaccttagctagaaagaagaatagtac-ttctttgtacaagagaac-tgaagacaaaatgaagctagatgcatccgtctatgagtaaatgcatagatttggtgacaaaaaattgagaagactca-ccagtggtttttatatactctgtgaag-aatgtaacaaagttacatgcagaagtttgaggagagtagaacatttgtgagata-ttttttgcacagaatgggagacggttgactagtaaagtggagcaggctcactggtcaatattaaggtccaagtaaggaactaacaaatgcaagttgaaggcaatatgctgagttcattattttctct--------agtagtgctcgtctgcttatgcgcatgcttagagaaagcaggtattttgggtgatgaagggttggtgttttgccagagagaagtgatgaaagacagaagagcaaggcaattTTGCCTATTTTT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162266328 589 - 192294377 taaacacatttaaatatacatggaaacgattgagtagaggaatcatggtttagtgacttgggaaagagaaggtaagcta----------ataagtttcctg----------------------------------------agaaggatagcagggatataatcagaag-caggaggtggaagactaaaccttagctagaaagaagaatagtac-ttctttgtacaagagaac-tgaagacaaaatgaagctagatgcatccgtctatgagtaaatgcatagatttggtgacaaaaaattgagaagactca-ccagtggtttttatatactctgtgaag-aatgtaacaaagttacatgcagaagtttgaggagagtagaacatttgtgaaata-ttttttgcacagaatgggagacggttgactagtaaagtggagcaggctcactggtcaatattaaggtccaagtaaggaactaacaaatgcaagttgaaggcaatatgctgagttcattattttctct--------agtagtgctcgtctgcttatgcgcatgcttagagaaagcaggtattttgggtgatgaagggttggtgttttgccagagagaagtgatgaaagacagaagaacaaggcaattTTGCCTATTTTT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150961990 589 - 180432695 taaacacatttaaatataaatggaaacgATTGAGTAGAGGAATCATGGTTTAGTGACTTGGGAAAGAGAAGGTAAGCTA----------ATAAGTTTCCTG----------------------------------------AGAAGGATAGCAGGGATATAATCAGAAG-CAGGAGGTGGAAGACTAAATCTTAGCTAGAAAGAAGAATAGTAC-TTCTTTGTACAAGAGAAC-TGAAGACAAAATGAAGCTAGATGCATCCATCTATGAGTAAATGCATAGATTTGGTGACAAAAAATTGAGAAGACTCA-CCAGTGGTTTTTATAtactctgtgaag-aatgtaacAAAGTTACATGCAGAAGTTTGAGGAGAGTAgaaaatttgtgaaata-ttttttgcACAGAATGGGAGACGGTTGACTAGTAAAGTGGAGCAGGCTCACTGGTCAATATTAAGGTCCAAGTAAGGAACTAACAAATGCAAGTTGAAAGCAATATGCTGAGTTCATTATTTTCTCT--------AGTAGTGCTCGTCTGCTTATGAGCATGCTTAGAGAAAGCAGGTATTTTGGGTGATGAAGGGTTGGTGTTTTGCCAGAGAGAAGTGATGAAAGACAGAAGAGCAAGgcaattttgcctattttt i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15051302 588 - 90373283 taaacacatttaaatatacatggaaacgattgagtagaggaatcatggtttagtgacttgggaaagaggaggtaagcta----------ataagtttcctg----------------------------------------agaaggatagcagggatataatcagaag-caagagatggaagactgaaccttagctagaaagaagaatagtactttctttgtacaagagagc-tgaagacaaaatgaagctagatgcatccgtctatgagtaaatgcatagatttggtgacaaaaaattgagaagactca-ccagtggtctttatgtactctgtgaag-aatgtaacaaaattacatgcagaagtttgaggagagtagaacatttgtgaaata-tttgttgcacagaatgggagacggttgactagtaaaatggagcaggctcactggtcaatattaaggtccaagtaagggactaacaaatgtaagttgaaagcaatatgctgagttcattattttctct--------agtagtgctcgtctgcttatgcgcatgcttagagaaagcaggtatttcgggtgatgaagggttggtgttttgccagagagaagtgatgaaagacagaagagcaaggcaattttgccta--tat i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21950510 570 + 50472720 taaacacacctaaatgtacatggaaaggattgagtaaaggaatcatagtttaatgacttgagaaagagaaggtaagcta----------ctaagtttcctg----------------------------------------agaagggtagcaggaatataattggaag-caagaggtggaagactg-accttagctaga---aaagatagtacattctttgtacaagagaac-tgaagacaaaatgaatacagatgcatccatctttgagtaaatgcacagatttggtggcaaaaacttgagaagagtcacctagtggt-tttatatactctatgaag-aaggtaacaaagttacatgcagaactttgaggagagtagaaaagttttcaaata-ttttttgcacagaatgggagagggttgactagtaaagtatagcaggctcactggtcaatattaa-gtccaagtaaggaactaatcaatgtaagttgaaagcgatctgctgaattcactattttctct--------agtagtgc-cgattttttatgtacatgcttagagaaagcagatatttcaagtga--------------tttgccagagagaaatgatgaaagacagaagggcaagacaatttagCCTATTTTT i calJac3.chr21 C 0 C 0 s canFam3.chr31 13842656 618 + 39895921 taaaaataaataaaTGTAGATGGGAAGGATCAAGTAGAG------------------------ACGGCAGGgtaagccaattccttattataaatcttctgtgtatatattctgcttctctggagaactctgactaatacaAAAagctaagaaggaatatgattagaaaccaagaggcggaagcctggacctcagctaggaagaacaat--tca-tcttccatagaggagaccatgaagagagaatgaatacagattcatcaatgtatgggtaagtgcatagattccatgatgaaagg-tgaggaaattcgtctactggtttccatatactctatgaagaaatgtaacaaagttgcatccagaagtttaaggagagtagaaaagttttgaaata-atttctgtcttgagtggaaga-agttggccggtaaaatatagcaggcttgctgagtagtgttagagtccaagcaaggaactaatgattttatgtgggaagcaatctgctgaattcataatattctttatgcactcatttgcactcatttgctcatgcacatgcttcggagaagctgatacttggattgatgcagag-tggtgttttgtcagaaagacgtgatgacaaacagaagaacaaggtaatt----CTATGTTT i canFam3.chr31 I 246 C 0 e mm10.chr16 78137242 89 + 98207768 I a score=1065127.000000 s hg38.chr21_KI270874v1_alt 113555 305 + 166743 AGAGAGGTATTGAAACTGGCGTAGATACGTAATTTA-TGAAAAGCAATATAACATTCTATTTTTCTCTAACTGAACTTGATTTTACTTTCAATCACCATTTATCCCTGAGGTGGAAAATTTTtattc---aaaaaaaattactaatgcatggaatctaagcca---gataggaagcaaagtgaagacagtaaagggataaCAACAAGGGAGATGACACAAGA-----GAGACTAAGCCTAATTCTCACCTA---TGGATGATTATGGGTCTATGAATGTTCTGCCAGCCTGGTTCAGAATTGGCTCCATAACTGGATAAT s panTro4.chr21 3727487 305 + 32799110 AGAGAGGTATTGAAACTGGCGTAGATACGTAATTTA-TGAAAAGCAATATAACATTCTATTTTTCTCTAACTGAACTTGATTTTACTTTCAATCACCATTTATCCCTGAGGTGGAAAATTTTtattc---aaaaaaaattactaatgcatggaatctaagcca---gataggaagcaaagtgaagacagtaaagggataaCAACAAGGGAGATGACACAAGA-----GAGACTAAGCCTAATTCTCACCTA---TGGATGATTATGGGGCTATGAATGTTCTGCCAGCCTGGTTCAGAATTGGCTCCATAACTGGATAAT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16990452 304 + 48394510 -GAGAGGTATTGAAACTGGCATAGATACGTAATTTA-TGAAAAGCaatataacattctatttttctctaactgaacttgattttactttcaatcaccatttatccctgaggcggaaaatttTtattc---aaaaaaaattactaatgcatggaatctaagcca---gataggaaggaaagcgaagacaggaaagggataaCAACGAGGGAGATGACACAAGA-----GAGACTAAGCCTAATTCTCACCTA---TGGATGATTATAGGGCTATGAATGTTCTGCCAGCCTGGTTCAGAATTGGCTCCATAACTGGATAAT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4487500 301 + 32716333 AGAGAGGTATTGAAACTGGCATAGATACGTAATTTA-TGaa----aatataacattctatttttctctaactgaacttgattttaccttcaatcaccatttatccctgaggcagaaaatttTtattc--aaaaaaaaattactaatgcatggaatctaagcca---gataggaaggaaagtgaagacaggaaagggataaCAACGAGGGAGATGACACAAGA-----GAGACTAAGCCTAATTCTCACCTA---TGGATGATTATGGGGCTATAAATGTTCTGCCAGCCTGGTTCAGAATTGGCTCCATAACT-GATAAT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168603171 308 - 198365852 AGATAGGTATCGAAACTGGAATAGATACGTAACTTA-TGAAAAGCAATATAACATTCTGTTTTTCTCTAACTGAACTTGATTTTACTTTCAATCACCATTTATCCCTGAAGCAGAAAATTTTTATTCAAAAAAAAAAATTACTAATGcatggaatctaagcca---gataggaagggcagtgaagacaggaaagggataaCAACAAAGGAGATGACATAAGA-----GAGACTAAGTCTAATTCTCACCTA---TGGATGATTATGGCGCTATGAATGTTCTGCCAGCCTGGTTCAGAATTGGCTCCATAACTGGATAAT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162266917 308 - 192294377 AGATAGGTATCGAAACTGGAATAGATACGTAACTTA-TGAAAAGCAATATAACATTCTGTTTTTCTCTAACTGAACTTGATTTTACTTTCAATCACCATTTATCCCTGAAGCAGAAAATTTTTATTCAAAAAAAAAAATTACTAATGcatggaatctaagcca---gataggaagggcagtgaagacaggaaagggataaCAACAAAGGAGATGACATAAGA-----GAGACTAAGTCTAATTCTCACCTA---TGGATGATTATGGCGCTATGAATGTTCTGCCAGCCTGGTTCAGAATTGGCTCCATAACTGGATAAT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150962579 308 - 180432695 agaTAGGTATTGAAACTGGAATAGATACGTAACTTA-TGAAAAGCAATATAACATTCTATTTTTCTCTAACTGAACCTGATTTTACTTTCAATCACCATTTATCCCTGAAGcagaaaatttttattcaaaaaaaaaaattactaatgcATGGAATCTAAGCCA---GATAGGAAGGAGAGTGAAGACAGGAAAGGGATAACAACAAAGGAGATGACATAAGA-----GAGACTAAGTCTAATTCTCACCTA---TGGATGATTATGGCGCTATGAATGTTCTGCCAGCCTGGTTCAGAATTGGCTCCATAACTGGATAAT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15051890 306 - 90373283 agataggtattgaAACTGGAACAGATACGTAATTTA-TGAAAAGCAATATAACATTTTATTTTTCTCTAACTTAACTTGATTTTACTTTCAATCACCATTTATCCCTGAAGCAGAAAATTTTTATTC--AAAAAAAAATTACTAATGTGTGGAATCTAAGCCA---GATAGGAAAGAGAGTGAAGACAGGAAAGGGATAACAACAAGGGAGATGACATAAGA-----GAGACTAAGTCTAATTTTCACCTG---TGGATGAATATGGCGCTATGAATGTTCTGCCAACTTGGTTCAGAATTGGCTCCATAACTGGATAAT i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21951080 305 + 50472720 AGAGAGGCATTGAAACTGGCATAGATATGTAATTtg-tgaaaagcaacataacatcttatttttctctaactgaacttgattttactttcaatcaccatttatccctgaggcagaaaTTTTTtattc---aaaaaaaattactaatgcatggaatctaagcca---cataggaaggaaagtgaagacaggagaggTATAACAACAAGGGAGATGATACGAGA-----GAAACTAAGCCTAATTCTCACCTA---TGGATGATAATGGGGCTATGAAGGTTCTGCTAGCCTGGTTCAGAATTGGCTCCATAACTGGCTAAC i calJac3.chr21 C 0 C 0 s mm10.chr16 78137331 213 + 98207768 AGTGAAGGGTTAAAATTGGTCTAGGTACATAATTTGTTTAAAAACAATAGAATAGTCTAATTATCT----------------------------------------------------------TTT---AAAAA--------------------CTAAACCATAGGATACAAATAAAAATGAGGTCTAGAGAGAAATAATGATTAGGATCAAG-TACAAG------------------AAGTCCCAACTACAGTGATGGACTACAGGGCCTTGAACATTCTGTAAGCCTGGTCAAGAACTGACTTCCTATTT------- i mm10.chr16 I 89 C 0 s canFam3.chr31 13843274 299 + 39895921 AGAGAGGTATTAAAATT-GTATAGGTATGTCATTTG-TGAAAAGTAATATAACATTCTATTTTTCTCTAACCAAACTTGATTCTACTACTCATCTCCATTTAGCCCAGGGGGAGGAAAAATATTTTA------AACAATTATTAATACGTGGAATCTGAGCTG---GATAGGAAGAAAAT----GTTGGAAATGGGATAATGATGAGGAAAATGACATAAGACAACTGGATCTAAG--TAATTCCCACCTA---TGGATGATTATGA-GCTATAAATGTTCAGCCAGCCTGGTCTAGAATTGGCTCCAAAACTGGATAAT i canFam3.chr31 C 0 I 226 a score=324937.000000 s hg38.chr21_KI270874v1_alt 113860 84 + 166743 GCT-GGATCTGAAGGTGCTG-G-ACTCCCAAACTCCAAATAATCCATACTAGGGAAAACAGGGGCTGACAATAAGAAACTGCCAGAA s panTro4.chr21 3727792 84 + 32799110 GCT-GGATCTGAAGGTGCTG-G-ACTCCCAAACTCCAAATAATCCATACTAGGGAAAACAGGGGCTGACAATAAGAAACTGCCAGAA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16990756 84 + 48394510 GCT-GGATCTGAAGGTGCTG-G-ACTCCCAAACTCCAAATAATCCATACTAGGGAAAACAGAGGCTGACAATAAGAAACTGCCAGAA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4487801 84 + 32716333 GCT-GGATCTGAAGGTGCTG-G-ACTCCCAAACTCCAAATAATCCATACCAGGGAAAACAGAGGCTGACAATAAGAAACTGCCAGAA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168603479 85 - 198365852 GCTGGGATCTGAAGGTGCTG-G-AGTCCCAAACTCCAAATAATCCATACTAGGGAAAACAGAGGCTGACAATAAGCAACTGCCAGAA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162267225 85 - 192294377 GCTGGGATCTGAAGGTGCTG-G-AGTCCCAAACTCCAAATAATCCATACTAGGGAAAACAGAGGCTGACAATAAGCAACTGCCAGAA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150962887 84 - 180432695 GCT-GGATCTGAAGGTGCTG-G-AGTCCCAAACTCCAAATAATCCATACTAGGGAAAACAGAGGCTGACAATAAGCAACTGCCAGAA i papAnu2.chr3 C 0 M 570 s chlSab2.chr2 15052196 84 - 90373283 GCT-GGATCTGAAGGTGCTG-G-AGTCCCAAACTCCAAATAATCCATACTAGGGAAAACAGAGGCTGACAATAAGCAACTGCCAGAA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21951385 84 + 50472720 GCT-GGATCTGAAGGTGCTG-G-ACTCCCAAACTCCAGATAATCCATACTTGGGTAGACAGAGGCTGACAATAAGCAACTGCCAGAC i calJac3.chr21 C 0 C 0 s mm10.chr16 78137544 82 + 98207768 ----GGACCTGAATGTCCTACA-ACTCCCTGACACCAGGTGATTCACAGTAGAAAAGACAGAGGCTAGAAGTAAGCCATTGTCCAAA i mm10.chr16 C 0 C 0 s canFam3.chr31 13843799 80 + 39895921 GCT-GGACCTGAAGGTGTTG-GAACTCTCTTACTCTAGATGATCAACACTGGGAAAAA-----GCTGACAGTAAACTACTGCCAGAT i canFam3.chr31 I 226 C 0 a score=1916356.000000 s hg38.chr21_KI270874v1_alt 113944 576 + 166743 GCATAAGCTGACTAGAATATTAATAAGTCCATATCTTGGCAATTATAATACCCAAAGGCCTTT-CTATCCA----CTTTTGCCCATTTCAGTTTTGTCATGTGATTTTCATTTAGACGGAGAATAAAGATATGTGGTCATTATGCTAGTTTCACTGGATGCTTTAAA-ACTAATGCCACTTTCAATTCTTGTTTCTAAGACAAGTGAAATTATCTCTGGCTGCAT--AAGCAAGGTGGTATTTAGTAGTCTAAATCTCTCTCCTGTATTTAAAATTGGTCTCTGTCTCTAACATTAGTTATACAACTCTCTACCCTTTGCATTTTAGGTGAATCACAGCCACAAAAGCTTACTCAGCTGGGGTGTTTCCTAATCCTATCAACTCAAGTCAGAGTCATCTTTTTCCACCTACATACACTTAGCTTTCAAATCTAAAATCCAAAGAAACATTTAAATTATTAAAGTCAATCTTGTGAGACAGGATTTGTCACAATATAGGACAAATAATTTAAAGAAATTCCACTTTAAATTTGAACTTACGTTGACTAGTCAAGGCTCTTTTCCAAATCAAATCAGTAAAATAGT s panTro4.chr21 3727876 576 + 32799110 GCATAAGCTGACTAGAATATTAATAAGTCCATATCTTGGCAATTATAATACCCAAAGGCCTTT-CTATCCA----CTTTTGCCCATTTCAGTTTTGTCATGTGATTTTCATTTAGACGGAGAATAAAGATATGTGGTCATTATGCTAGTTTCACTGGATGCTTTAAA-ACTAATGCCACTTTCAATTCTTGTTTCTAAGACAAGTGAAATTATCTCTGGCTGCAT--AAGCAAGGTGGTATTTAGTAGTCTAAATCTCTCTCCTGTATTTAAAATTGGTCTCTGTCTCTAACATTAGTTATACAACTCTCTACCCTTTGCATTTTAGGTGAATCACAGCCACAAAAGCTTACTCAGCTGGGGTGTTTCCTAATCCTATCAACTCAAGTCAGAGTCATCTTTTTCCACCTACATACACTTAGCTTTCAAATCTAAAATCCAAAGAAACATTTAAATTATTAAAGTCAATCTTGTGAGACAGGATTTGTCACAATATAGGACAAATAATTTAAAGAAATTCCACTTTAAATTTGAACTTACGTTGACTAGTCAAGGCTCTTTTCCAAATCAAATCAGTAAAATAGT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16990840 566 + 48394510 GCATAAGCTGATTAGAATATTAATAAGTCCATATCTTGGCAATTATAATACCCAAAGGCCTTT-CTATCCA----CTTTTGCCCATTTCAGTTTTATCATGTGATTTTCATTTAGATGGAGAATAAAGATATGTGGTCATTATGCTAGTTTCACCGGATGCTTTAAA-ACTAATGCCATTTTCAATTCTTGTTTTTAAGACAAGTGAAATTATCTCTGACTGCAT--AAGCAAGGTGGTATTTAGTAGTCTAAATCTCTCTCCTGTATTTAAAATTGTTCTCTGTCTCTAACATTAGTTATACAACTCTCTACCCTTTGCATTTTAGGTGAATCACAGCCACAAAAGCTTGCTCAGCTGGGGTGTTTCCTAATCCTATCAACTCAAGTCAGAGTTATCTTTTTCCACCTACATACACTTAGCTTTCAAATCTAAAATCCAAAGAAACATTTAAATTATTAAAGTCAATCTTGTGAGACAGGATTTATCACACCATAGGACAAAT----------AATTCCACTTTAAATATGAACTTACATTGACTAGTTAAGGCTATTTTCCAAATCAAATCAGTAAAATAGT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4487885 576 + 32716333 GCATAAGCTGATTAAAATATTAATAAGTCCATGTCTTGGTAATTATAATACCCAAAGGCCTTT-CTATCCA----CTCTTGTCCATTTCACTTTTGTCATGTGATTTTCATTTAGACAGAGAATAAAGATATGTGGTCATTATGCTAGTTTCACTGGATGCTTTAAA-ACTAATGCCATTTTCAATTCTTGTTTCTAAGACAAGTGAAATTATCTCTGACTGCAT--AAGCAAGGTGGTATTTAGTAGTCTAAATCTCTCTCCTGTATTTAAAATTGGTATCTGTCTCTAACATTAGTTATACAACTCTCTACCCTTTGCATTTTAGGTGAATCACAGCCACAAAAGCTTACTCATCTGGGGTGTTTCCTAATCCTATCAACACAAGTCAGAGTCAACTTTTTCCACCTACATACACTTAGCTTTCAAATCAAAAATCCAAAGAAACATTTAAATTATTAAAGTCAATCTTGTGAGGCAGGATTTGTCACACCATAGGACAAATAATTTAAAGAAATTCCACTTTAAATTTGAACGTACATTGACTAGTTAAGGCTCTTTTCCAAATCAAAGCAGTAAAAtagt i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168603564 576 - 198365852 GCATAAGCTGACTAGAATATTAAGAAGTCCCTATCTTGGCAATTATAACACCCAAAGCCCTTT-CTATCCA----TTTTTGCCCATTTCAGTTTTGTCATGTGATTTTCATTTAGATGGAGAATATAGATATGTGGTCATTATGCTAGTTTCACCGGATGCTTTAAA-ACTAATGCCATTTTCAATTCTTGTTTCTAAGACAAGTGAAATTATCTCTGACTGCAT--AAGCAAGGTGGTGTTGAGTAGTCTAAATCTCTCTCCTGTATTTAAAATTGGTCTCTGTCTCTGACATTAGTTATACAACTCCCTATCTTTTGCATTTTAAGTGAATCACAGCCACAAAAGCTTACTCAGCTGGGGTGTTTCTTAATCCCATCAACTCAAGTCACAATCATCTTTTTCCACCCACATACACTTAGCTTTCAAATCTAAAATCCAAAGAAACATTTAAATTATTAAAGTCAATCTTGTGAGACAAGATTTGTCACACTATAAGACAAATAATTTAAAGAAATTTCACTTAAAATTTGAACTTACATTGACTATTCAAAGCTCTTTTCCAAATCAAATCAGTAACATAGT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162267310 576 - 192294377 GCATAAGCTGACTAGAATATTAAGAAGTCCCTATCTTGGCAATTATAACACCCAAAGCCCTTT-CTATCCA----TTTTTGCCCATTTCAGTTTTGTCATGTGATTTTCATTTAGATGGAGAATATAGATATGTGGTCATTATGCTAGTTTCACCGGATGCTTTAAA-ACTAATGCCATTTTCAATTCTTGTTTCTAAGACAAGTGAAATTATCTCTGACTGCAT--AAGCAAGGTGGTGTTTGGTAGTCTAAATCTCTCTCCTGTATTTAAAATTGGTCTCTGTCTCTGACATTAGTTATACAACTCCCTATCTTTTGCATTTTAAGTGAATCACAGCCACAAAAGCTTACTCAGCTGGGGTGTTTCTTAATCCCATCAACTCAAGTCACAATCATCTTTTTCCACCCACATACACTTAGCTTTCAAATCTAAAATCCAAAGAAACATTTAAATTATTAAAGTCAATCTTGTGAGACAAGATTTGTCACACTATAAGACAAATAATTTAAAGAAATTTCACTTAAAATTTGAACTTACATTGACTATTCAAAGCTCTTTTCCAAATCAAATCAGTAACATAGT i macFas5.chr3 C 0 C 0 s chlSab2.chr2 15052280 576 - 90373283 GCATAAGCTGACTAGAATATTAAGAAGTCCATATCTTGGCAATTATAACACCCAAAGGCCTTT-CTATCCA----TTTTTGCCCATTTCAGTTTTGTCATGTGATTTTCATTTAGGTGGAGAATAAAGATATGTGGTCATTATGCTAGTTTCACCGGATGCTTTAAA-ACTAATGCCATTTTCAATTCTTGTTTCTAAGACAAGTGAAATTATCTCTGACTGCAT--AAGCAAGGTGGTGTTTAGTAGTCTAAATCTCCCTCCTGTATTTAAAATTGGTCTCTGTCTCTGACATTAGTTATACAACTCCCTATCCTTTGCATTTTAAGTGAATCACAGCCACAAAAGCTTACTCAGCTGGGGTGTTTCTTAATCCCATCAACTCAAGTCACAGTCGTCTTTTTCCACCCACATACACTTAGCTTTCAAATCTAAAATCCAAAGAAACATTTAAATTATTAAAGTCAATCTTGTGAGACAGGATTTGTCACACTGTAAGACAAATAATTTAAAGAAATTTCACTTTAAATTTGAACTTACATTGACTATTCAAAGCTCTTTTCCAAATCAGATCAGTAACATAGT i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21951469 574 + 50472720 GCATAAGCTGACCAGAATAATCATAAGTCCATATCTTGGCAATTATAATACCCAAAGGCCTTT-CTATCCA----TTCTTGCCAATTTCAGTTTTATCATGTGATTTTCATTTAGATGGAGAAT--GGATACTTGGTCATTGTGCTAGTTTCAACAGATGCTTTAAA-ACTAATGCCATTTTCAATTCTTATTTCTAAAACAAGTGAAATTCTCTCTGACTGCAT--AAGCAAGGTGGTATTTAGTAGTCTAAATCTCTCTCTTGTATTTAAAATTGTTCTCTGTCTCTAACATTAGTCATACAACTCTCTACCCTTTGCATTTTAAGTGAATCACAGCCACAAAAGCTTACTCAGCTGGGGTGTTTCTTAATCCTATCAACTCAAGTCAGAGTCATCTTTTTCCACCCACATACACTTAGCTTTCAAGTCTAAAATCCAAAGAAACATTTAAATTATTAAAGTCAATCTTGTGAGACAGGATTTGTCACACTATAGGACAAGTCATTTAAAGAAATTCCACTTTCAATTTGAACTTACATTGACTAGCCAAGGTTCTTTTCCAAATCAAATCAGTAAAATAGT i calJac3.chr21 C 0 C 0 s mm10.chr16 78137626 566 + 98207768 GCAAACATTGAGCAGAACGGTAAGAAGCCTCTGTCACGATAATTATAATACACAAAGGGCTTTCCTATCTC----TTTCTGTCAATCCTAGTTCTATCATATGATTTTCATTTAGATGAACAATGAAGATACTTTATCATTGTACCGGTTTCATTGCACCCTTTAAATGCAAATGTCATTTTTAATTCTTGTTTA-AGGACAAGTGGAATCACTTCAGACTGCAT--AAGCAAGATGATATTTAATAGTCTAAACTCCTCTCC-ATATTTGAAATTGGTCTGTCTCTCTAGCACTTGTGACATGTGCGTCTACCCTTTGCATTTTAAATGAATTGCTGCCACCGAAGCCTGCCCAGCTGAGTCACCTCATAATCCTATCAATTTCAGTCAACATCATC-CTATACACCTACATATACTTTGCTATCAAGTATAAAAACCAAAGAAACATTTATATTATTAAAGTCAATCTTGTGAAACAA-ATTTGTCTCTATGTAGAACAAATAATTTAAACAAATTTCACTGTATATTTGATCTTATGTTAGCT----AAGACTC----CCAAATCAAATTGGTAAAGTAAT i mm10.chr16 C 0 I 5616 s canFam3.chr31 13843879 579 + 39895921 GCA-AAGCTGACCAGAATATTAAGAAGCCCATGTCTTGGCAGTTTAACTACCCACAG-CCTTT-CCATCCGTTTTTTTTTTTCCATCCCTGTTTTGTCATATGATTTTTATTTAGACAGAGAATGAAGACACTCCATCATTGTACTAGTTTTATTGGCTGCTTTAAA-GGTAATGCCACTTCCGATTCTTGTTTAGAAGAAAAGTGAAATTATTTCTGACTGCATAAAAGCAAGGTGCTATTTAGTAGTCTAAACCCCTCTCCTATATTTAAAATCATTCTCTGTCTCTAACATTAGTTACACAACTATCTACCCTTTGCATTTTAAGTGAATTGGAGCCACAAAAGCTTACTCAGCTGGGTTGTTTCTTAATCCTATCAATTCAAGTCAGAATCATCCTTTTCCACCCACATACACTTAGCTTTCAAGTCTAAAATCCAAAGAAACATTTAAATTATTAAAGTCAATCTTGTGAGACAGGATTTGTCACAGTGTAGG-CAAGCAATTTAAAGAAACTCTGACATAAATTTCAACTTACGCTGACCAGCCAAGGCTCATTCCCAAATCAAACCAGTGAACTAAT i canFam3.chr31 C 0 C 0 e papAnu2.chr3 150962971 570 - 180432695 M a score=30671.000000 s hg38.chr21_KI270874v1_alt 114520 15 + 166743 ATTTGCTATGTTTTA s panTro4.chr21 3728452 15 + 32799110 ATTTGCTATGCTTTA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16991406 15 + 48394510 ATTTGTGATGTTTTA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4488461 15 + 32716333 atttgttatgtgtta i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168604140 15 - 198365852 ATTTGTTATGTTTTC i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162267886 11 - 192294377 A----TTATGTTTTC i macFas5.chr3 C 0 C 0 s chlSab2.chr2 15052856 15 - 90373283 ATTTGTTATGTTTTC i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21952043 15 + 50472720 ATTTGTTATGTTTTA i calJac3.chr21 C 0 C 0 s canFam3.chr31 13844458 15 + 39895921 ATTTGTTTTGTTTTG i canFam3.chr31 C 0 C 0 e mm10.chr16 78138192 5616 + 98207768 I e papAnu2.chr3 150962971 570 - 180432695 M a score=436957.000000 s hg38.chr21_KI270874v1_alt 114535 174 + 166743 GCATTTTGTTTTAATGATCATGTTTGGGCATTGTTTTTATGTTTTATTATTTT--TACTACTCCCATAATATGGA-TT--------TATAATG------------------TAACAACTATCTATTTT------ATATCTGCTATGCTTGAAATACTGTGTTA-TGTGCCCCAAGCTTAAAAAGTAGAAAGTCACAATTTTTGCTTTGTA s panTro4.chr21 3728467 174 + 32799110 GCATTTTGTTTTAATGATCATGTTTGGGCATTGTTTTTATGTTTTATTATTTT--TACTACTCCCATAATATGGA-TT--------TATAATG------------------TAACAACTATCTATTTT------ATATCTGCTATGCTTGAAATACTGTGTTA-TGTGCCCCAAGCTTAAAAAGTAGAAAGTCACAATTTTTGCTTTGTA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16991421 171 + 48394510 GCATTTTGTTTTAATGATCATGTTTGGACATTATTTTTATGTTTCATTGTTTT-----TACTCCTATAATATGGA-TT--------TATAATG------------------TAACAACTATCTATTTT------GTATCTGCTATGCTTGAAACACTGTGTTA-TGTGCCCCAAGCTTAAAAAGTAGAAAGTCACAATTTTTGCTTTGTA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4488476 174 + 32716333 gcattttgttttaatgatcatgtttggacattatttttatgttttatTAGTTT--TACTACTCCTATAATGTGGA-TT--------TATAATG------------------TAACAACTATCTATTTT------GTATCTGCTATGCTTGAAACACTATGTTA-TGTGCCCCAAGCTTAAAAAGTAGAAAGTCACAATTTTCGCTTTGTA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168604155 175 - 198365852 GCATTTTGTTTTAATGATCAAGTCTGGACGTTATTTTTATGTTTTATTATTTT--TACTACTCCTTTAATATGGAGTT--------TATAATG------------------TAGCAACTATATATTTT------GTATCTGCTATGCTTGAAACACTGTGTTA-TGTGCCTCAAGCTTAAAAATTGGAAAGTCACAATTTTTGCTTTATA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162267897 175 - 192294377 GCATTTTGTTTTAATGATCAAGTCTGGACGTTATTTTTATGTTTTATTATTTT--TACTACTCCTTTAATATGGAGTT--------TATAATG------------------TAGCAACTATATATTTT------GTATCTGCTATGCTTGAAACACTGTGTTG-TGTGCCTCAAGCTTAAAAATTGGAAAGTCACAATTTTTGCTTTATA i macFas5.chr3 C 0 C 0 s chlSab2.chr2 15052871 173 - 90373283 ACATTTTGTTTTAATGATCAAGTCTGGACGTTATTTTTATGTTTTATTATTTT--TACTACTCCTTTAATATGGAGTT--------TATAATG------------------TAGCAACTATATATTTT------ATATCTGCTATGCTTGAAACAC--TGTTA-TGTGCCTTAAGCTTAAAAATTGGAAAGTCGCAATTTTTGCTTTACA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21952058 169 + 50472720 ACATCTTGTTTGCATGATCAAGTTTGGACATTATTTTTATGTTTTATTATTTT--TACTACTCCTATAATATGGAGTT--------TATAATG------------------TAACAAC----TATTTT------GTATCTGCTATGCTTGAAACACTATGTTA-CATGCCCTATGCTTAAAAAGTGG--AGTCACAATGTTTGTTTTATA i calJac3.chr21 C 0 C 0 s mm10.chr16 78143808 176 + 98207768 gtatactctttTAACTACCAGGATGGGGCATTACCTT--TTTCTTATTACATT------------GCAATGTAGACTT--------CATAATAATAATAAAGTAACTACCTTAACAGATATCTATTTGTTCTTAGTATTTG----ACTTGA-------CTTCA-GATTTCAAAAACTTTAAACAAAGGAAGAAATAAGCCTTGCTCTCTG i mm10.chr16 I 5616 C 0 s canFam3.chr31 13844473 186 + 39895921 ATGTTTTGTTTTCATGACCGAGTTTGGGCATTATTTTCATGTGTAATTATTTTATTATGAACTCTGtattatagaattaatttaaaaataata------------------aaaCAAATATCTAGTGA------GTATCTAGTAGGCTTAAAACACTATCCTATTGTGCCCCAGACTTAAAAAGCAGAAAGTCATAATTCTTGCGATATA i canFam3.chr31 C 0 I 1505 e papAnu2.chr3 150962971 570 - 180432695 M a score=224356.000000 s hg38.chr21_KI270874v1_alt 114709 94 + 166743 AGTTCTAAATCCTT-TGATGTGGATACACAAGTACACAAGTATACCTTACAATAGCACTTGAATTAAGTGTGGAAGGAGTCTTGAGACTGTGAAC s panTro4.chr21 3728641 94 + 32799110 AGTTCTAAATCCTT-TGATGTGGATACACAAGTACACAAGTATACCTTACAATAGCACTTGAATTAAGTGTGGAAGGAGTTTTGAGACTGTGAAC i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16991592 94 + 48394510 AGTTCTAAATGCTT-TGATGTGGATACACAAGTACACAAGTATACCTTACAATAGCACTTGAATTAAGTGTGGAAGGAGTTTTGAGACTGTGAAC i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4488650 94 + 32716333 AGTTCTAAATCCTT-TGATGTGGATACACAAGTACACCAGTGTACCTTACAATAGCACTTGAATTAAGTGTGGAAGGAGTTTTGAGACTGTGAAC i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168604330 94 - 198365852 AGTTCTAAATCTTT-TGATGTGGATACACAAGTACCCAAGTATACCTTACAATAGCACTTGAACTAAGTGTGGAAGGAGTATTGAGATTGTGAAC i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162268072 94 - 192294377 AGTTCTAAATCTTT-TGATGTGGATACACAAGTACCCAAGTATACCTTACAATAGCACTTGAACTAAGTGTGGAAGGAGTATTCAGATTGTGAAC i macFas5.chr3 C 0 C 0 s chlSab2.chr2 15053044 93 - 90373283 AGTTCTAAATCTTT-TGATGT-GATACACAAGTACCCAAGTATACCTTACAATAGCACTTGAACTAAGTGTGGAAGGACTACTGAGATTGTGAAC i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21952227 94 + 50472720 GGTTCTAAATCTCT-TGATGTGGATACACAGGTACACAAGTATGACTTACAATAGCACTTGAATTAAGTGGGGAAGGAGTACCGAGGCTGTGAAC i calJac3.chr21 C 0 C 0 s mm10.chr16 78143984 88 + 98207768 GACTATAGATGCTCAGGGTATGGGTGCAT-----TCTAATTAGACCTCTCAATAGTTCTTGATCTAAAATAG--AGGCTCATTGAAGCTGTGAAC i mm10.chr16 C 0 C 0 e canFam3.chr31 13844659 1505 + 39895921 I e papAnu2.chr3 150962971 570 - 180432695 M a score=44387.000000 s hg38.chr21_KI270874v1_alt 114803 14 + 166743 --TAAAGCCGAGACAG s panTro4.chr21 3728735 14 + 32799110 --TAAAGCCGAGACAG i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16991686 14 + 48394510 --TAAAGCCGAGATAG i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4488744 14 + 32716333 --TAAAGCCGAGATAG i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168604424 14 - 198365852 --TAAAGCCGAGATAG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162268166 14 - 192294377 --TAAAGCCGAGATAG i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150963541 14 - 180432695 --tAAAGCCGAGATAG i papAnu2.chr3 M 570 C 0 s chlSab2.chr2 15053137 14 - 90373283 --TAAAGACGAGATAG i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21952321 14 + 50472720 --TAAAGCCGAGAGAG i calJac3.chr21 C 0 C 0 s mm10.chr16 78144072 16 + 98207768 TGTAAACTATTGACAG i mm10.chr16 C 0 C 0 e canFam3.chr31 13844659 1505 + 39895921 I a score=1824521.000000 s hg38.chr21_KI270874v1_alt 114817 468 + 166743 GC----AGAACTTAAAAGATGGAAAGGAAGAA-GAGATATCTAATT---AGGCagagatgaaggactccaacaaaaccccatatttctcaggctgagtcaatggaag-aaaagtgttatatctggcagaaattggatatttaggaataatgagttgttttgtggaggaaggtgataaatctgttttg---------agaaatttttagtttaaagaaac-tgtggaacatgcaaataatgatgtctagcaggcagttggaaatgggtagccagagcttt----------------ggagcgga---------gctgtagatctcggagttatttgcatgaagcaat-aaaagctgctacaatctt-aatggtgagaattggataaaaac-aaattgtgcatggggtggggtggtg-----gtatgaggatagaaatctggagcatttggggaagaagaaaaaaacgcaacaaaa-ggagacagtaagggacataaatatgaaactagttgtcagagatacc s panTro4.chr21 3728749 468 + 32799110 GC----AGAACTTAAAAGATGGAAAGGAAGAA-GAGATATCTAATT---AGGCagagatgaaggactccaacaaaaccccatatttctcaggctgagtcaatggaag-aaaagtgttatatctggcagaaattggatatttaggaataatgagttgttttgtggaggaaggtgataaatctgttttg---------agaaatttttagtttaaagaaac-tgtggaacatgcaaataatgatgtctagcaggcagttggaaatgggtagccagagcttt----------------ggagcgga---------gctgtagatctcggagttatttgcatgaagcaat-aaaagctgctacaatctt-aatggtgagaattggataaaaac-aaattgtgcatggggtggggtggtg-----gtatgaagatagaaatctggagcatttggggaagaagaaaaaaacacaacaaaa-ggagacagtaagggacataaatatgaaactagttatcagagatacc i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16991700 468 + 48394510 GC----AGAATTTAAAAGTTGGAAAGGAAGAA-GAGATATCTAATT---AGGCagagatgaaggactccaacaaaaccccatatttctcaggctgagtcaatggaag-aaaagtgttatatctggcagaaattggatatttaggaataatgagttgttttgtggaggaaggtgataaatctgttttg---------agaaatttttagtttaaagacac-tgtggaacatgcaaataatgatgtctagcaggcagttggaaatttgtagccagagcttt----------------ggagcgga---------gctgtagaactcggagttatttgcatgaagcaat-aaaagctgctacaatctt-aatggtgagaattggataaaaac-aaattgtgcatggggtggagtggtg-----gtatgaggatagaaatctggagcatttggggaagaagaaaaaaacacaacaaaa-ggagacagtaagggacataaatacaaaactagttgtcagagatacc i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4488758 468 + 32716333 GC----AGAATTTAAAAGATGGAAAGGAAGAA-GAGATATCTAATT---AGGCAGAGCTGAaggactccaacaaaaccccatatttctcaggctgagtcaatggaag-aaaagtgttatatctggcagaaattggatatttaggaataatgagttgttttgtggaggaaggtgacaaatctgttttg---------agaaatttttagtttaaagaaac-tgcggaacatgcaaataatgatgtctagcaagcagttggaaatgtgtggccagagcttt----------------ggggcgga---------gctgtagaactcggagttatttgcatgaagcaat-aaaagctgctacaatctt-aaaggtgagaactggataaaaac-aaattgtgcatggggtggggtggtg-----ctatgaggatagaaatctggagcatttggggaagaagaaaaaaacacaacaaaa-agagacagtaagggacataaatacaaaactagttgtcagagatacc i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168604438 467 - 198365852 GC----AGAATTTAAAAGATGGAAAGGAAGAA-GAGATACCTAATT---AGGCAGAGCTGAaggactctaacaaaaccccatatttctcaggctgagtcaatggaag-aaaagtgttatatttggcagaaattggatatttaggaataatgagttgttttgtggaggaaggtgataaatctgttttg---------agaaatttttagtttaaagaaac-tgtggaacatgcaaataatgatgtctagcaggcagttggaaatgtgtagccagagcttt----------------ggagcgga---------gctgtagaacttggagttatttgcatgaaataat-aaaagctgctacaatctt-aatggtgagaattggataaaaac-aatttgtgcatggggtagggtggtg-----gtatgaggacggaaatctggagtatttttggaagaag-aaaaaacacagcaaaa-ggagacagtaagggacataaatacaaaactagttgtcagagatacc i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162268180 467 - 192294377 GC----AGAATTTAAAAGATGGAAAGGAAGAA-GAGATACCTAATT---AGGCAGAGCTGAaggactctaacaaaaccccatatttctcaggctgagtcaatggaag-aaaagtgttatatttggcagaaattggatatttaggaataatgagttgttttgtggaggaaggtgataaatctgttttg---------agaaatttttagtttaaagaaac-tgtggaacatgcaaataatgatgtctagcaggcagttggaaatgtgtagccagagcttt----------------ggagcgga---------gctgtagaacttggagttatttgcatgaaataat-aaaagctgctacaatctt-aatggtgagaattggataaaaac-aatttgtgcatggggtagggtggtg-----gtatgaggacggaaatctggagtatttttggaagaag-aaaaaacacagcaaaa-ggagatagtaagggacataaatacaaaactagttgtcagagatacc i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150963555 466 - 180432695 GC----AGAATTTAaaagatggaaaggaagaa-gagatatCTAATT---AGGCAGAGCTGAAGGACTCTAACAAAACCCCATATTTCTCAGGCTGAGTCAATGGAAG-AAAAGTGTTATATTTGGCAGAAATTGGATATTTAGGAATAATGAGTTGTTTTGTGGAGGAAGGTGATAAAtctgttttg---------agaaatttttagtttaaagAAAC-TGTGGAACATGCAAATAATGATGTCTAGCAGGCAGTTGGAAATGTGTAGCCAGAG-TTT----------------GGAGCGGA---------GCTGTAGAACTTGGAGTTATTTGcatgaaataat-aaaagctgCTACAATCTT-AATGGTGAGAATTGGATAAAAAC-AAATTGTgcatggggtggggtggtg-----gtATGAGGACGGAAATCTGGAGTatttttggaagaag-aaaaaacacagcAAAA-GGAGACAGTAAGGGATATAAATACAAAACTAGTTGTCAGAGATACC i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15053151 467 - 90373283 GC----AGAATTTAAAAGATGGAAAGGAAGAA-GAGATATCTAATT---AGGCAGAGCTGAaggactctaacaaaaccccatatttctcaggctgagtcaatggaag-aaaagtgttatatttggcagaaattggatatttaggaataatgagttgttttgtggaggaaggtgataaatctgttttg---------agaaatttttagtttaaagaaac-tgtggaacatgcaaataatgatgtctagcaggcagttggaaatgtgtagccagagcttt----------------ggagcgga---------gctgtagaactcggagttatttgcatgaaataat-aaaagctgctacaatctt-aatggtgagaattggataaaaac-aaattgtgcatggggtggggtggtg-----gtatgaggacggaaatctggagtatttttggaagaag-gaaaaacacagcaaaa-ggagacagtaagggatataaatacaaaactagttgtcagagatacc i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21952335 474 + 50472720 GC----AG-ATTTAAAAGATGG-AAGGAAGCA-GAGATATCTGATT---Agacagagataaagggctccaacaaaaccccatatttctcaggctgagtcaatggaag-aaaagtgttatatttggcagaaattgggtatttaggaataatgagttgttttgtggaggaaggtgataaatctgttttg---------tgaaatttttagtttaaagaaac-tgtggaacatgcaaataatgatgtctagcaggcagctggaaatgtgtagccggagattt----------------ggagcaga---------gctgtagaactgggagttatTTGAGTGAAAGAAT-AAAAGCTGCTACAATCTTAAATAGTGAAAATTGGATAAAAACAAAATTTTGCATGGGGTGGGGTGGGGTGGTTGTATGAGGACAGAAATCAGGAGTATTGGCGGAAAGAAGAAAAAAAACAGCAAGACGGAGACAGTAAAGGACATAAATACAAAACTAGTTGTCAGAGATACC i calJac3.chr21 C 0 I 8528 s mm10.chr16 78144088 482 + 98207768 GCTGCAAGAATTCAAAACTTAGCAAGAAAG---GACATATTTAATTTTAAAACATGGGTG-------CCAAGCAAACTCTATATATTTTAAACAGAGTCAAAAGATGAAAAAGTGTTCTATTTGGCAGAAACTTGATGTTTAGAAATAATAAGCTCTTCTGTGGAGGAAGGTGATAAATCAGTTCTGAGAATTTTTAGAAGTTTTTAGTTGAAAGGAACAAGTGGGACATGCAAATAGTGATGTCTAGCAGGAAGTTAAGAAGGTGTGGCTGGAGTCTCAGTGAGGGGGCAGGAGGGAGCAAA---------GCTGCAAAACT-GGAATCATTTGCACGAAGCAGT-AAAAGCTGTTGTGACCATGAATGGTGAGAACTGGAGAGTAGC-AAACTGTCCATGAGGTGAGACAGTG--------TGGAGACAGACATGTGGAGAATAGCAGAAAGAAG------ACAGGGTGTGG-GGAGGCAGCAAAGGGACAAGACATCAAATCGGTGGTTAGGAAGC-- i mm10.chr16 C 0 C 0 s canFam3.chr31 13846164 465 + 39895921 GC----AGAA-TTAAGCAATGAGAAGGAAGAAGGAGCTGTCTGACT---AGACAGAGATGAAGGACTTCAATGAAACTTCGTATTTTTCAGGCTGAGTCAATGGGAG-AAAAGTAATAAAATTGGCAGAAATTGGAAATTTAGTAACAATGAGTTGTTTTGTAGAGAAGGGTGATAAAACTGGTTTG---------ACAAATTTTTCGTTTACAGAAAC-TGTAGAACATGCAAATAATGATGTCTAGCAGGCAGCTGGAAATGTGTAGCTAGAGCTTT----------------GTAGCAAAGGGCATAGGGCGGTGGAACTGGGAGTGATTTACATGAAACAATAAAAAGCTGCTATGATCTTGAATGGTGAGAATTAGATAAAAAC-AAATTGTGTATGGGG------GATG-----ATACGAAGAAAGAAATTTAG-------TAAGAAGAAGAAAAAGATACAGCAAAG-ACAGACAGCAAAACG-GTAAACACAAAATTAGTATTCAGAAATAGC i canFam3.chr31 I 1505 C 0 a score=41252.000000 s hg38.chr21_KI270874v1_alt 115285 20 + 166743 caaagagccaagataatat----a s panTro4.chr21 3729217 21 + 32799110 caaagagccaagataatat---ca i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16992168 19 + 48394510 caaagagccaagataatat----- i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4489226 20 + 32716333 caaagagccaagataatat----c i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168604905 21 - 198365852 caaagagccaagataata---taa i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162268647 22 - 192294377 caaagagccaagataatat--taa i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150964021 22 - 180432695 CAAAGAGCcaagataatat--taa i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15053618 24 - 90373283 caaagagccaagatcatataaaaa i chlSab2.chr2 C 0 C 0 s mm10.chr16 78144570 20 + 98207768 CAAGAAAGCAAGGGAATGT--T-- i mm10.chr16 C 0 C 0 s canFam3.chr31 13846629 20 + 39895921 CAGAGAGCCAAGATAATAC--C-- i canFam3.chr31 C 0 C 0 e calJac3.chr21 21952809 8528 + 50472720 I a score=2460069.000000 s hg38.chr21_KI270874v1_alt 115305 739 + 166743 aaaaaaaaatcagaagagaaaaaattt------------------tcattaagaacagtgtgatcaa-------------------------------------------------------ctctgtcaaatgcc-----------------acagaGATTTTGGAAATAAATCATTTC---CTAAATCACTCAGT------------------------------ATTGTCAATCTTGGGA-ATATAGCG--TATGTTACTCTTAATGAGAGCTACCAATATT--------------------------------------AATTACTTTTCAAATTAATAATTATATTTTAATTCTCTCTTCAAGTTTAAGAAAGAAACATACACATAAAA---ATGTATCTGGATTTGTCTGAGTTGA--GCTTCTCCTTTAGTA-GGCAGGGATTTGCAGGTGTCCCCAGAG-GTGATGACTCCCTTCATCATTGTAATTACACACCCTTTTCTTACCATCA-------TTTCCAA-GTACAT-GTCACTGGTCTCGGAGCAGGAAGGCTCC------------------TTCTCCCAATTCAGTGTCTGT-------------------CAGAAGTCTTC-----------------------CCTGTTCATCAGATTTAGTCACTCAA-------TGCCGCCTAACAGTTGGAG---AAAACATTGAGagccagacttagccagact--tagccagacttGTGGGCCACAGCTGCTAAGGTTCTGA-AAAGCA-TTGCACTGAAAATTAAAACCCACTAACTGAAAAAGAAAATAAAAATTCACAGAAATTAGTTTCTAAAGATCATGGCACTTGGTTGAGGAGATATTTAGAG-----AATCGACCCTTAAAATAACACCACGTAAACAAGTTCTAATTTAACATATCCCAAGAGTGACATTGTACTTGAACA----AGTTTGACTAAGATTATTCTGTGAATT s panTro4.chr21 3729238 729 + 32799110 aaaaaaaaatcagaagagaaaaaattt------------------tcattaagaacagtgtgatcaa-------------------------------------------------------ctctgtcaaatgcc-----------------acagaGATTTTGGAAATAAATCATTTC---CTAAATCACTCAGT------------------------------ATTGTCAATCTTGGGA-ATATAGCG--TATGTTACTCTTAATGAGAGCTACCAACATT--------------------------------------AATTACTTTTCaaattaataattatattttaattCTCTCTTCAAGTTTAAGAAAGAAACATACACATAAAA---ATGTATCTGGATTTGTCTGAGTTGA--GCTTCTCCTTTAGTA-GGCAGGGATTTGCAGGTGTCCCCAGAG-GTGATGACTCCCTTCATCATTGTAATTACACACCCTTTTCTTACCATCA-------TTTCCAA-GTACAC-GTCACTGGTCTCGGAGCAGGAAGGCTCC------------------TTCTCCCAATTCAGTGTCTGT-------------------CAGAAGTCTTC-----------------------CCTGTTCATCAGATTTAGTCACTCAA-------TGCCGCCTAACAGTTGGAG---AAAACATTGA----------CAGCCAGACT--TAGCCAGACTTGTGGGCCACAGCTGCTAAGGTTCTGA-AAAGCA-TTGCACTGAAAATTAAAACCCACTAACTGAAAAAGAAAATAAAAATTCACAGGAACTAGTTTCTAAAGATCATGGCACTTGGTTGAGGAGATATTTAGAG-----AACCGACCCTTAAAATAACACCACGTAAACAAGTTCTAATTTAACATATCCCAAGAGTGACATTGTACTTGAACA----AGTTTGACTAAGATTATTCTGTGAATT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16992187 728 + 48394510 caaaaaaaatcagaagagaaaaaattt------------------tcattaagaacagtgtgatcaa-------------------------------------------------------ctctgtcaaatgcc-----------------acagaGATTTTGGAAATAAATCATTTC---CTAAATCACTCAGT------------------------------ATTGTTAATCTTGGGA-ATATAGCA--TATGTTACTCTTAATGAGAGCTACCAACATT--------------------------------------AATTACTTTTCaaattaataattatattttaattCTCTCTTCAAGTTTAAGAAAGAAACATACACATAAAA---ATGTATCTGGATTTGTCTGAGTTGA--GCTTCTCCTTTAGTA-GGCAGGGATTTGCAGGTGTCCCCAGAG-GTGATGACTCCCTTCATCATTGTAATTACACACCCTTTTCTTACCATCA-------TTTCCAA-GTACAT-GTCACTGGTCTCGGAGCCGGAAGGCTCC------------------TTCTTCCAATTCAGTGTCTGT-------------------CAGAAGTCTTC-----------------------CCTGTTCATCAGATTTAGTCACTCAA-------TGCCGCCTAACAGTTGGAG---AAAACATTGA----------GAGCCAGACT--TAGCCAGACTTGTGGGCCACAGCTGCTAAGGTTCTGA-AAAGCA-TTGCACTGAAAATTAAAACCCACTAACTGAAAAAGAAAATAAAAATTCATAGAAATTAGTTTCTAAAGATCATGGCACTTGGTTGAGGAGATATTTAGAG---AAAATCGGCCCTTAAAATAACACCATGTAAACAAGTTCTAATTTAACGTGTCCCAAGAGTGACATTGTAGTTGAACA----GGTTTGAT---GATTATTCTGTGAATT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4489246 724 + 32716333 aaaacaaaatcagaagagaaaaaattt------------------tcattaagaacagtgtgatcaa-------------------------------------------------------ctctgtcaaatgcc-----------------acagaGATTTTGGAAATAAATCATTTT---CTAAATCACTCAGT------------------------------ATTGTT-ATCTTGGGA-ATCTAGCG--TATGTTACTC-----GAGAGCTACCAACATT--------------------------------------AATTACTTTTCAAATTAATAATTATATTTTAATTCTCTCTTCAAGTTTAAGAAAGAAACATACACATAAAA---ATGTATCTGGATTTGTCTGAGTTGA--GCTTCTCCTTTAGTA-GGCAGGGATTTGCAGGTG-CCCCAGAG-GTGATGACTCCCTTCGTCATTGTAATTACACAACCTTTTCTTACCATCA-------TTTCCAA-GTACAT-GTCACTGGTCTCGGAGCAGGAAGGCTCC------------------TTCTCCCAGTTCAGGGTCTGT-------------------CAGAAGTCTTC-----------------------CCTGTTCATCAGATTTAGTCACTCAA-------TGCCGCCTAACAGTTGGAG---AAAACATTGA----------GAGCCAGACT--TAGCCAGATTTGTGGGCCACAGCTGCTAAGGTTCTGA-AAAGCA-TTGCACTGAAAATTAAAACCCACTAACTGAAAAAGAAAATAAAAATTCATAGAAATTAGTTTCTAAAGATCAGAGCACTTGGCTGAGGAGATATTTAGAG---AAAATCGACCCTTAAAATAACACCATGTAAACAAGTTCTAATTTAACATATCCCAAGAGTGACACTGTAGTTGAACA----AGTTTGATTAAGATTATTCTGTGAATT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168604926 731 - 198365852 aaaaaaaaatcagaagagaaaaaattt------------------tcattaagaatggtgtgatcaa-------------------------------------------------------ctctgttaaatgcc-----------------acagaGATTTTGGAAATAAATCATTTC---CTAAATCACTCAGT------------------------------ATTGTTAATCTTGGGA-ATATAATG--TATGTTACTCTTAATGAGAGCTACCAACATT--------------------------------------AATTACTTTTCaaattaataattatattttaattCTCTCTTCAAGTTTAAGAAAGAAACATACACATAAAA---ATGTATCTGGATTTGTCTGAGTTGA--GCTTCTCCTTTAGTA-GTTAGGGATTTGCAGGTGTCCCCAGAG-ATGATGACTCCCTTCGTCATCGTAATTACACATCCCTTTCTTATCATCA-------TTTCCAA-GTACAT-GTCACTGGTCTCAGAGCAGGAAGGCTGC------------------TTCTCCCAATTCACTATCTGT-------------------CGGAAGTCTTC-----------------------CCTGTTCATTAGATTTAGTCACTCAA-------TGCTGCCTAACAGTGGGAG---AAAACATTGA----------GAGCCAGACT--TAGCAGGACTTGCAGGCCACAGCTGCTAAGGTTCTGA-AAAGCA-TTGCACTGAAAATTAAAACCCACTCACTGAAAAAGAAAATAAAAATTCATAGAAATTAGTTTCTAAAGATCATGGCACTTGGTTGAGGAGACATTTAGAG---AAAATCAACCCTTAAAATAACACCATGTAAACAAGTGCTAAGTTAACATATCCCAAGAGTGACATTGTAATTGAACA----AGTTTAATTAAGATTATTCTGTGAATT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162268669 731 - 192294377 aaaaaaaaatcagaagagaaaaaattt------------------tcattaagaatggtgtgatcaa-------------------------------------------------------ctctgttaaatgcc-----------------acagaGATTTTGGAAATAAATCATTTC---CTAAATCACTCAGT------------------------------ATTGTTAATCTTGGGA-ATATAATG--TATGTTACTCTTAATGAGAGCTACCAACATT--------------------------------------AATTACTTTTCAAATTAATAATTATATTTTAATTCTCTCTTCAAGTTTAAGAAAGAAACATACACATAAAA---ATGTATCTGGATTTGTCTGAGTTGA--GCTTCTCCTTTAGTA-GTTAGGGATTTGCAGGTGTCCCCAGAG-ATGATGACTCCCTTCGTCATCGTAATTACACATCCCTTTCTTATCATCA-------TTTCCAA-GTACAT-GTCACTGGTCTCAGAGCAGGAAGGCTGC------------------TTCTCCCAATTCACTATCTGT-------------------CGGAAGTCTTC-----------------------CCTGTTCATTAGATTTAGTCACTCAA-------TGCTGCCTAACAGTGGGAG---AAAACATTGA----------GAGCCAGACT--TAGCAGGACTTGCAGGCCACAGCTGCTAAGGTTCTGA-AAAGCA-TTGCACTGAAAATTAAAACCCACTCACTGAAAAAGAAAATAAAAATTCATAGAAATTAGTTTCTAAAGATCATGGCACTTGGTTGAGGAGACATTTAGAG---AAAATCAACCCTTAAAATAACACCATGTAAACAAGTGCTAAGTTAACATATCCCAAGAGTGACATTGTAATTGAACA----AGTTTAATTAAGATTATTCTGTGAATT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150964043 731 - 180432695 aaaaaaaaatcagaagagaaaaaattt------------------tcATTAAGAATGGTGTGATCAA-------------------------------------------------------CTCTGTTAAATGCC-----------------ACAGAGATTTTGGAAATAAATCATTTC---CTAAATCACTCAGT------------------------------ATTGTTAATCTTGGGA-ATATAATG--TATGTTACTCTTAATGAGAGCTACCAACATT--------------------------------------AATTACTTttcaaattaataattatattttaattctctcttcaagtttaagaaagaaacatacacataaaa---atgtatCTGGATTTGTCTGAGTTGA--GCTTCTCCTTTAGTA-GTCAGGGATTTGCAGGTGTCCCCAGAG-ATGATGACTCCCTTCGTCATCGTAATTACATATCCCTTTCTTATCATCA-------TTTCCAA-GTACAT-GTCACTGGTCTCAGAGCAGGAAGGCTGC------------------TTCTCCCAATTCACTGTCTGT-------------------CGGAAGTCTTC-----------------------CCTGTTCATTAGATTTAGTCACTCAG-------TGCTGCCTAACAGTGGGAG---AAAACATTGA----------GAGCCAGACT--TAGCAGGACTTGCAGGCCACAGCTGCTAAGGTTCTga-aaagca-ttgcactgaaaattaaaacccactcactgaaaaagaaaataaaaattcatagaaattaGTTTCTAAAGATCATGGCACTTGGTTGAGGAGACATTTAGAG---AAAATCAACCCTTAAAATAACACCATGTAAACAAGTGCTAATTTAACATATCCCAAGAGTGACATTGTAATTGAACA----AGTTTAATTAAGATTattctgtgaatt i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15053642 731 - 90373283 aaaaaaaaatcagaagagaaaaaaatt------------------tcattaagaatggtgtgatcaa-------------------------------------------------------ctctgttaaatgcc-----------------acagaGATTCTGGAAATAAATCATTTC---CTAAATCACTCAGT------------------------------ATTGTTAATCTTGGGA-ATATAATG--TATGTTACTCTTAATGAGAGCTACCAACATT--------------------------------------AATTACTTTTCAAATTAATAATTATATTTTAATTCTCTCTTCAAGTTTAAGAAAGAAACATACACATAAAA---ATGTATCTGGATTTGTCTGAGTTGA--GCTTCTCCTTTAGCA-GTCAGGGATTTGCAGGTGTCCCCAGAG-ATGATGACTCTCTTCGTCATCGTAATTACACATCCCTTTCTTATCATCA-------TTTCCAA-GTACAT-GTCACTGGTCTCAGAGCAGGAAGGCTGC------------------TTCTCCCAATTCAGTGTCTGT-------------------CGGAAGTCTTC-----------------------CCTGTTCATTAGATTTAGTCACTCAA-------TGCTGCCTAACAGTGGGAG---AAAACATTGA----------GAGCCAGACT--TAGCAGGACTTGCAGGCCACAGCTGCTAAGGTTCTGA-AAAGCA-TTGCACTGAAAATTAAAACCCACTCACTGAAAAAGAAAATAAAAATTCATAGAAATTAGTTTCTAAAGATCATGGCACTTGGTTGAGGAGACATTTAGAG---AAAATCGACCCTTAAAATAACACCATGTAAACAAGTGCTAATTTAACATATCCCAAGAGTGACATTGTAATTGAACA----AGTTTAATTAAGATTATTCTGTGAATT i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21961337 709 + 50472720 aataaaaaattaaaaaaaaaaAAA-----------------------AAAAAGAACAGTGTGATCAA-------------------------------------------------------CTCTGATAAATGCC-----------------ACAGAGATTTTGGAAATAAATCATTTC---TAAAATCACTCAGT------------------------------ATTATTAATCTTGGGA-ATATAAC----ATGTTACGCTTAATAAGAGCTACCAAC------------------------------------------ATGACTTTTCGAACTAATAATTATATTTTAATACTCTCTTCAAGTTTAAGACAGAAACATACACATAAAA---ATGTATCTGCATTTGTCTAAATTGA--GCTTCTCCTTTAGTA-AGCAGAAATTTGCAGGTGTCCCCAGAG-GTGATGACTCCCTTTGTCATCGTAATTACACACCCCTTTCTTACCATCA-------TTTCCAA-GTATATGGTCACTGGTCTTGGAGCAGGACAGCTCC------------------TTCTCCCAATTCAGT-TCTGT-------------------CGGAAGT-TTC-----------------------CCTGTTCACCAGATTTAGTCACTCAA-------TTCTGCCTAACAGTTGGAG---AAAACACTGA----------GAGCCA------------GATTTGTGGGCCAAAGCTTCTAAGGTTCTCA-AAAGCA-TTGCACTGAAAATTAAAATCCACTAACttaaaaagaaaataaaaaattataaaaatGAGTTTCTAAAGCTCATGGCACTTGGTTGAGGAGATATTTAGAG---AAAACTGACCCTTAAAATAACACCATGTAAAACAGTTCTAATTTAACATATCCCAAGCCTGACATTGTAATTGAACA----AGTTTGATTAAGATTATTCTGTGAATT i calJac3.chr21 I 8528 C 0 s mm10.chr16 78144590 956 + 98207768 --AAAGACATCAGAAAGCGAAATCATTAAGATTGTGATGATCCCATCAAaaaggacaaagtggtcaaaaaggacaaagtggcagcttatagaatggggaaccattcccttcaccaaccttacctctgacaaaagactgatatccaaaatatataaagaactcaagaaactagatagcaacaaaccaaatagcccaattaaagaatggggtacagagctaaacagagaattctcaacagtggaacctttaatggccaagaagcacttaatga-aatgatcaacatccttagtcatcagggaagtgcaaatcaaaatgactctgagattcctcctcacaccaatcagaatagctaagctct------aaacctcaggagataccatatgctggcga-----------ggatgtggacaaggagaatactcctccgttactATTTCCCGTCTATGACGATGGCTCTGGAATAGGAAGACTCCTTTC-TTGCTGCAGTAGAATATGGTTTTTGAACTATTAAACTCTGTTTCCAGTGCACAT-TTCAC-ACCTTGAAAGCAGACTGTCTCTGCTTTCATTCTTAGTCCATTGTCCCTATCCAGTTTCTTTATTCTAAGACACAAAAACGTGGAAGCCCTCTAAGGATGCCCTTGGAACTCCAGTATATCCATAGTACTTTGACTTCCAGACAACTTTCCTGTTCAGCATTTGCAGCTCAGAACAGTTA----------AACGAAGATTGCTAACA-GAATTGTGGTCCACAGCTGCTACAGTTCTGA-GGAACATTTGCACTTAACTTTCTAGCC----AACTAGAAAAATGGGTAAAAATCCA-AGCCACATGTTCCTAATGGCCACGACACTCAGTTGAGAATATACTTAGAAAAAAAAATCGCTCCTCAAAATAACTC---GTAGGAAACCTCTCATTCAACTTAGTGTAAACCTGAA---GGACTTGAGCGCAGCAAGTCGATTAAGATGTTTCTGTGATGT i mm10.chr16 C 0 C 0 s canFam3.chr31 13846649 690 + 39895921 --AAAAAAATCAGAAGAGAAAAAGTTC------------------TCATTATGAATAGTGAGATCAA-------------------------------------------------------CTCTGTCAAATGCC-----------------ACAGAGATTTTGGAAATAAATCATTTC---CAAAATCACTCAGT------------------------------ATTATTAATCTTGGGA-ATACAGAG--CATGTTATGCCTAATAAGAGCCACCAGTATT--------------------------------------AATTAATTTTCAAACTAATAATTATATCTTAATCCTCTCTTCAAATTTGAGA-GGTAACATACTTATAAGAATGATGTCTTTGAACTTGTCTGAGTTGA--GTTTCTCCTTTACAA------GGAGTTGCAGGTATTTCCAGAG-GTG-TGCCTCCTTTTACCATCAGAATTACACACGGTTTCCTAGTCATCA-------TTTCCAA-ACAGAT-GTCACTGGTCTCAGAAT---AAGCCTCC------------------TTCTCTT-------TGTCCAC-------------------TAGAGCTCTGC-----------------------TCTATTCTTCATCTTTACTCACTTAA-------T---GCCTCAGAACTGGAG---AAAGAGTTAA----------GAGCCAGAGT------------TGTGGGTCATAGCTGCTAATGTTCTGAGGAAGCATTTGCACTGAACATTCCAATC----TACTAGAAAAGAAAATAAGATTCAAAGGGAATAAGTTTCAAAAGATCATGAC----GTTTGAAGAGATAC--AGGG---AGAAGCATCCCTTA----TATAGCATGTAGACAACCTCTCATTTAACTTATCCTGAAACTGACATTGTAAGTGGACA----AGTTTGATTGAGGTTATCTTGTCCATT i canFam3.chr31 C 0 I 162 a score=15015.000000 s hg38.chr21_KI270874v1_alt 116044 3 + 166743 TTT s panTro4.chr21 3729967 3 + 32799110 TTT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16992915 3 + 48394510 TTT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4489970 3 + 32716333 TTT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168605657 3 - 198365852 TTT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162269400 3 - 192294377 TTT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150964774 3 - 180432695 ttt i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15054373 3 - 90373283 TTT i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21962046 3 + 50472720 TTT i calJac3.chr21 C 0 C 0 s mm10.chr16 78145546 3 + 98207768 TTT i mm10.chr16 C 0 I 937 s canFam3.chr31 13847501 3 + 39895921 TTT i canFam3.chr31 I 162 C 0 a score=202171.000000 s hg38.chr21_KI270874v1_alt 116047 56 + 166743 TAAAGCCATACCACAATGCTATTATTCCAATGCTAGAATCATCTTTCTAAAGAGGA s panTro4.chr21 3729970 56 + 32799110 TAAAGCCATACCACAATGCTATTATTCCAATGCTAGAATCATCTTTCTAAAGAGGA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16992918 56 + 48394510 TAAAGCCATACCACAATGCTATTATTCCAATGCTAGAATCGTCTTTCTAAAGAGGA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4489973 56 + 32716333 TAAAGCCATACCACAATGCTATTATTCCAATGCTAGAATCATCTTTCTAAAGAGGA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168605660 56 - 198365852 TAAAGCCATACCACAATGCTATTATTCCAACGCTAGAATCATCTTTCTCAAGAGGA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162269403 56 - 192294377 TAAAGCCATACCACAATGCTATTATTCCAACGCTAGAATCATCTTTCTCAAGAGGA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150964777 56 - 180432695 aaaagccataccACAATGCTATTATTCCAACGCTAGAATCATCTTTCTTAAGAGGA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15054376 56 - 90373283 TAAAGCCATACCACAATGCTATTATTCCAATGCTAGAATCATCTTTCTCAAGAGGA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21962049 56 + 50472720 AAAAGCCATACCGCAATGCTATTATTCCAATGCTAGAATCATCTTTCTCAAGAGGA i calJac3.chr21 C 0 C 0 s canFam3.chr31 13847504 56 + 39895921 TTAAGATATACCAGGATGTTATTATTTCAGTCCCTGAATCATCTCTCTCAAAAGAG i canFam3.chr31 C 0 C 0 e mm10.chr16 78145549 937 + 98207768 I a score=1751292.000000 s hg38.chr21_KI270874v1_alt 116103 515 + 166743 CCTCAAAGATTTGGCAGGTAGGGGAGTAG----CCTCATGTAGTCTT-T-TCTCTGCATTTCAAAGATTCTCCTGTTCTAGATTGATGAGGAGATTCCTGATGCCAATATTTTCTAGTAGTCTACTTTCACTGATAGAAGCAGCCAAAGAGAAATCTTA--GTGTCCTGCA---------CACAGCTGGTTAACTTACATTTGCCTTTATAGATGCATTGTATTTTTTGTCTTTGAAAGTGCTTGA----TCATCTTTTC-------------------CTTTTTCAAATGCTAT---TTTCTTTTTT-CTAGAATATGAAAATAGATGCAATTTAAGTTGGGAAAAGTCAAAGGTGACATTAAAAAATATTTCACAACTAGGTAAGT--AACTGGGGCATGGGAAAG-----AAGGCAGTTAG---AAAG--GTGGGAAGGCTCTTGGGGAGGCTC-AAAAGATG----GCCATTTAATAACAG----AGAGAG----------TTCAG---------------TCG-TCTTTTAACAAATAGTATGTTCTTATGGGTTCCTACTCTTTGGATTACCACCCT-GAGCAAACTTTTTCTTT--ATATGA s panTro4.chr21 3730026 515 + 32799110 CCTCAAAGATTTGGCAGGTAGGGGAGTAG----CCTCATGTAGTCTT-T-TTTCTGCATTTCAAAGATTCTTCTGTTCTAGATTGATGAGGAGATTCCTGATGCCAATATTTTCTAGTAGTCTACTTTCACTGATAGAAGCAGCCAAAGAGAAATCTTA--GTGTCCTGCA---------CACAGCTGGTTAACTTACATTTGCCTTTATAGATGCATTGTATTTTTTGTCTTTGAAAGTGCTTGA----TCATCTTTTC-------------------CTTTTTCAAATGCTAT---TTTCTTTTTT-CTAGAATATGAAAATAGATGCAATTTAAGTTGGGAAAAGTCAAAGGTGACATTAAAAAATGTTTCACAACTAGGTAAGT--AACTGGGGCATGGGAAAG-----AAGGCAGTTAG---AAAG--GTGGGAAGGCTCTTGGGGAGGCTC-AAAAGATG----GCCATTTAATAACAG----AGAGAG----------TTCAG---------------TCG-TTTTTTAACAAATAGTATGTTCTTATGGGTTCCTACTCTTTGGATTACCACCCT-GAGCAAACTTTTTCTTT--ATACGA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16992974 514 + 48394510 CCTCAAAGATTTGGCAGGTAGGGGAGTAG----CCTCATGTAGTCTT-T-TTTCTGCATTTCAAAGATTGTTCTGTTCTAGATTGATGAGGAGATTCCTGATGCCAATATTTTCTAGTAGTCTACTTTCATTGATAGAAGCAGCCAAAGAGAAATCT----GTGTCCTGCA---------CACAGCTGGTTAACTTACATTTGCCTTTATAGATGCATTGTATTTTTTGTCTTTGAAAGTGCTTGA----TCATCTTTTC-------------------CTTTTTCAAATGCTAT---TTCCTTTTTT-CTAGAATGTGAAGATAGATACAATTTAAGTTGGGAAAAGTCAAAGGTGACATTAAAAAATATTTAACAACTAGGTAAGT--AACTGGGGCATTGGAAAG-----AAGGCAGTTAG---AAAT--GTGGGAAGGCTCTTGGGGAGGCTCAAAAAGATG----GCCATTTAATAATGG----AGAGAG----------TTCAG---------------TCG-TTTTTTAACAAATAGTATGTTCTTATGGGTTCCTACTATCTGGATTACCACCCT-GAGCAAATTTTTTCTTT--ATATGA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4490029 516 + 32716333 CCTCAAAGATTCGGCAGGTAGGGGAGTAG----CCTCATATAGTCTT-T-TTTCTGCATTTCAAAGATTCCTCTGTTCTAGATTGATGAGGAGATTCCTGATGCCAGTATTTTCTAGTAGTCTACTTTCATTGATAGAAGCAGCCAAAGAGAAATCTTA--GTGTCCTGCA---------CACAGCTGGTTAACTTACATTTGCCTTTATAGATGCAATGTATTTTTTATCTTTGAAAGTGCTTGA----TCATCTTTTC-------------------CTTTTTCAAATGCTAT---TTCCTTTTTT-CTAGAATGTGAAGATAGATGCAGTTTAAGTTGGGAAAAGTCAAAGGTGACATTAAAAAATATTTAACAACTAGGTAGGT--AACTGGGGCATGGGAAAG-----AAGGCAGTTAG---AAAG--GTGGGGAGGCTCTTGGGGAGGCTC-AAAAGATG----GCCATCTAATAATGG----AGATAG----------TTCAG---------------TCATTTTTTTAACAAATAGTAAGTTCTTATGGGTTCCTACTATGTGGATTACCACCCT-GAGCAAACTTTTTCTTT--ATATGA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168605716 515 - 198365852 CCTCGAAGATTTGGCAGGTAGGGGAGTAG----CCTCATATAGTCTT-T-TTTCTGCATTTCAAAGATTCTTCTGTTCTAGATTGACAAGGAGATTCCTGATGCCAATATTTTCTAGTAGTCTA-TTTCATTGATAGGAGCAGCCAAAGAGAAATCTTA--GTGTCCTGCA---------CACAGCTGGTTGACTTACATTTGCCTTTATGGATGCATTGTAATTTTTGTCTTTGAAAGGGCTTGA----TCATCTTTTT-------------------CTTTTTCAAATGCTAT---TTCCTTTTAT-CTAGAATGTGAAGATAGATACAATTTACGTTGGGAAAATTCAAAGGTGACATTAAAAAATATTTAACAACTAGGTAAGT--AACTGGGGCATGAGAAAG-----AAGGCAGCTAGA--AAAG--GTGGGAAGGCTCTTGGGGAGGGTC-AAAAGATG----GCCATTTAATTATGG----AGAGAG----------TTCAG---------------TTG-TTTTTTAACAAATAGTATGTTCTTATGGGTTCCTGCTATCTGGATTACCACCCT-GAGCAAACTTTTTCTTT--ATATGA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162269459 515 - 192294377 CCTCGAAGATTTGGCAGGTAGGGGAGTAG----CCTCATATAGTCTT-T-TTTCTGCATTTCAAAGATTCTTCTGTTCTAGATTGACAAGGAGATTCCTGATGCCAATATTTTCTAGTAGTCTA-TTTCATTGATAGAAGCAGCCAAAGAGAAATCTTA--GTGTCCTGCA---------CACAGCTGGTTGACTTACATTTGCCTTTATGGATGCATTGTAATTTTTGTCTTTGAAAGTGCTTGA----TCATCTTTTC-------------------CTTTTTCAAATGCTAT---TTCCTTTTTT-CTAGAATGTGAAGATAGATACAATTTACGTTGGGAAAATTCAAAGGTGACATTAAAAAATATTTAACAACTAGGTAAGT--AACTGGGGCATGAGAAAG-----AAGGCAGCTAGA--AAAG--GTGGGAAGGCTCTTGGGGAGGGTC-AAAAGATG----GCCATTTAATTATGG----AGAGAG----------TTCAG---------------TTG-TTTTTTAACAAATAGTATGTTCTTATGGGTTCCTGCTATCTGGATTACCACCCT-GAGCAAACTTTTTCTTT--ATATGA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150964833 515 - 180432695 CCTCGAAGATTTGGCAGGTAGGCGAGTAG----CCTCATATAGTCTT-T-TTTCTGCATTTCAAAGATTCTTCTGTTCTAGATTGACAAGGAGATTCCTGATGCCAATATTTTCTAGTAGTCTA-TTTCATTGATAgaagcaggcaaagagaaatCTTA--GTGTCCTGCA---------CACAGCTGGTTGACTTACATTTGCCTTTATGGATGCATtgtaatttttgtctttgaaagtgcttga----tcatcttttc-------------------ctttttcaaacgctat---ttcctttttt-ctagaaTGTGAAGATAGATACAATTTAAGTTGGGAAAAGTCAAAggtgacattaaaaaatatttaacaactaggTAAGT--AACTGGGGCATGAGAAAG-----AAGGCAGCTAGA--AAAG--GTGGGAAGGCTCTTAGGGAGGGTC-AAAAGATG----GCCATTTAATTATGG----AGAGAG----------TTCAG---------------ttg-ttttttaacaaatagtATGTTCTTACGGGTTCCTGCTATCTGGATTACCACCCt-gagcaaacttttttttt--atatga i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15054432 515 - 90373283 CCTCGAAGATTTGGCAGGTAGGGGAGCAG----CCCCATATAGTCTT-T-TTTCTGCATTTCAAAGATTCTTCTGTTCTAGATTGACAAGGAGATTCCTGATGCCAATATTTTCTAGTAGTCTA-TTTCATTGATAGAAGCAGCCAAAGAGAAACCTTA--GTGTGCTGCA---------CACAGCTGGTTGACTTACATTTGCCTGTATGGATGCATTGTAATTTTTGTCTTTGAAAGTGCTTAA----TCATCTTTTC-------------------CTTTTTCAAATGCTAT---TTCCTTTTTT-CTAGAATGTGAAGATAGATACAATTTACGTTGGGAAAAGTCAAAGGTGACATTAAAAAATATTTAACAACTAGGTAAGT--AACTGGGGCATGAGAAAG-----AAGGCAGCTAGA--AAAG--GTGGGAAGGCTCTTGGGGAGGGTC-AAAAGATG----GCCATTTAATCATGG----AGAGAG----------TTCAG---------------TTG-TTTTTTAACAAATAGTATGTTCTTATGGGTTCCTGCTATCTGGATTACCACCCT-GAGCAAACTTTTTCTTT--ATATGA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21962105 513 + 50472720 CATCAAAGATTTGGCAGATAGGGGAGTAG----CCTCATGTCGCCTTGT-TTTCTGCACTTCAAAGATTCTTCTGTTCTAGATTAACAAGGAGATTCTTGTTGCCAGTATTTTCTAGTAGTCTACTTTCATTGGTAGAAGCAGCCAAAGAGAAATCTTG--GTGTCATGCA---------CACAGCTGG-----TTACATCTGCCTTTATAGATGCATTGTATTTTTTGTCTTTGAAAGTGATTAA----TCATCTTTTC-------------------GTTTTTCAAATGCCGT---TTCCTTTTTTCCTGAAATGTGACAATAGATACTGTTTAAGTTGGGAAAAGTCAAAGGTGACATTAAAAAATATCTAACAATTTGGTAAAG--AATTGGGGCCTGGGAGAG-----AAGGCAGCTAG---AAAG--GTGGGAAGGCTCTTGAGTAGGCTC-AAAATACA----GCCATTGAATAATGA----AGAGAG----------TTCAG---------------TTGTTTTTTTAACAAATAGTATGTTCTCATGGGTTCTTACTCTCTGGATTACCACCGT-GAGCAAACTTTTTCTTT--ATATGG i calJac3.chr21 C 0 I 1 s mm10.chr16 78146486 521 + 98207768 CTTTTAAGATTTGGAAAGTAAAGG-GCAG----CTTC-TACAGTCTT-TAGTTTTGCATCTCAAAGAATCTCCTGGGCAAGGCT----AGAAATGTCCTGCTG---GATTTTTCTAGCTGCCATTTTCCTCTGATAGTAGCCATCAAAGAGGAGCGT-----TGTCTGGCAGCTCTGAATCCCACCTGGCT------CCTCCTCTTCTCTGCAACCACTGTGTTTTAT-TCTGGGAAAGTGCTTCAAGTGTCTTCTTTtctctctctctctctctctctctctctctctctctct---ctctctctct-ctAAAATGTGAAAATAGATGTAACTAAAGTTGAGAAAAATCAAAGATGACATTCTAAAATATATACCTAACAAATAGTTTCTAATAGATCCTGGGAGAA-----GAGCCAAGGAGGCCAAAGTCATGGAATGGCTTTTGAG--AGCTA-TAAAGGTA-----CCATCAAATACCGGCAGAATAGCA----------TTCTA---------------TGG------------------TGTTCTTAGGAGTTCTGACTATGTGAGTCCCCACCATAGAGAAGGTTTGCTTTAA--AAATAA i mm10.chr16 I 937 I 1 s canFam3.chr31 13847560 527 + 39895921 CATCAGAGATTTGGAAGAT-GGGGAGTAGTTATTCCCATGT-GTTTT-C-CCTTTGCATTTCAAAGAGCTTTTCACTTGAGGTACACCAGGAAATCTCTGATGCCACTGTTTTCTACTGGTCTCCTTTCATTGATGGTGGTAGTCAAAAAGAAACCTTACCTTATTATATA---------CCCAGCCAG--------------CTTTTATATATGCATTATATTTTCT-TCTTTGAAAGTCCTTGA----CCATCTTTTC-------------------CCTTCTCAGGTGTTCGTTATTTTTTTTTT-CTAGAATCTAAGGATAGATGTTATTTAAATTGAGAAAATTCAAAGGT-ATATCTTAAAATAT--------TAGTTAAAT--AACTAGAGCCTGGGAGAGAAGCCAAGGCAATTGG---GGAC--ATAGGAAGGC-------AGGACTC-AAAAGGTGGCAGGCTGTTCAATAATGG----AGAGAAGAGAGGTTATTTCAGGttttttttttttgtttt-ttttttaaaaaCTATTGTAGTCAAAGGGGTTTCTACTACCTGAATTTCCACCCG-GAGCAAACTTTTCCTTTAAAAATGA i canFam3.chr31 C 0 I 439 a score=2598685.000000 s hg38.chr21_KI270874v1_alt 116618 720 + 166743 TTCCCTTAAATCTAAACTCTGATTTGTGAAAACCCAAGAGAAGCCTTCCACATGAT-TTCACTGCTTGCCAGGTTAAACCTGCAAAAGATGGTGTATCCATATTTCGTGACTTGGCTCTGGCCAGTTAGAAAAAAGA--------CAAGCATATGGTATTACTTTCCATGACTGATGACTTTGCTCTG-CT-GACACCTTTCCTTCCCACACTGTTTACCCTACTAATGTAGCCACACA-AA------------AGAAGTCAGCCTAAAAAT--GTCCTCAGAAGCTCTCAAGTTAGATAACTCAGAAGTTTCTTGTGAACATAAGTTGAAGGTATAAAGATACAGAG-----TCATAGTGTTGGTCTGGAAA--GAAAGAACAACCTATTTTTAGTCATGGTTAGCACGAACCTATGTCTTGGATCTTACCATTTCAAATAGCTTGTGCCA---TTTTTTAAAATCATGTTCACCACTTTTTGGTTGAGTCATTGTAGTCTGTAA-TTAGAGAGCCTATAACAAGTTTTATATAAAATTTAAAAGTACTTAC----T-AAAAAAATAAAAGAGTCAAATATAAG-AATAAATACATGGTGAGGGATAGGGAAGTGTGGTAT--CTACAGGAGTCAGATACTTCCTTTGTGCTTCCTAAATTAATCAGG-AAAGATTTATTGAAATAAAGGGCTTGGAAACCTTCTTTCAGC--Taaaa------aaaaaaaaaaaaaaaa---GTCTTTCAAGTAGACCAGGAGA-GAGAATGTATA s panTro4.chr21 3730541 727 + 32799110 TTCCCTTAAATCTAAACTCTGATTTGTGAAAACCCAAGAGAAGCTTTCCACATGAT-TTCACTGCTTGCCAGGTTAAACCTGCAAAAGATGGTGTATCCATATTTCGTGACTTGGCTCTGGCCAGTTAGAAAAAAGA--------CAAGCATATGGTATTACTTTCCATGACTGATGACTTTGCTCTG-CT-GACACCTTTCCTTCCCACACTGTTTACCCTACTAATGTAGCCACACA-AA------------AGAAGTCAGCCTAAAAAC--GTCCTCAGAAGCTCTCAAGTTAGATAACTCAGAAGTTTCTTGTGAACATAAGTTGAAGGTATAAAGATACAGAG-----TCATAGAGTTGGTCTGGAAA--GAAAGAACAACCTAATTTTAGTCATGGTTAGCACGAACCTATGTCTTGGATCTTACCATTTCAAATAGCTTGTGCCA---TTTTTTAAAATCATGTTCACCACTTTTTGGTTGAGTCATTGTAGTCTGTAA-TTAGAGAGCCTATAACAAGTTTTATATAAAGTTTAAAAGTACTTACATACT-AAAAAAATAAAAGAGTCAAATATAAG-AATAAACACATGGTGAGGGATAGGGAAGTGTGGTAT--CTACAGGAGTCAGATACTTCCTTTGTGCTTCCTAAATTAATCAGG-AAAGATTAATTGAAATAAAGGGCTTGGAAACCTTCTTTCAGC--Taaaa------aaaaaaaaaaaaaaaaaaaGTCTTTCAAGTAGACCAGGAAA-GAGAATGTATA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16993488 720 + 48394510 TTCCCTTAAATCTAAACTCTGATTTGTGAAAACCCAAGAGAAGCTTTCCACATGAT-TTCACTGCTTGCCAGGTTAAACCTACAAAAGATGGTGTATCCATATTTCGTGACTTGGCTCTGGCCAGTTAGAAAAAAGA--------CAAGCATATGGTATTACTTTCCATGACTGATGACTTTGCTCTG-CT-GACACCTTTCCTTCCCACACTGTTTACCCTACTAATGTAGCCACACA-AA------------AGAAGTCAGCCTAAAACC--GTCCTCAGAAGCTCTCAAGTTAGATAACTCAGAAGTTTCTTGTGAACATAAGTTGAAGGTATAAAGATGCAGAG-----TCATAGAGTTGGTCTGGAAA--GAAAGAACAACTTATTTTTAGTCGTGGTTAGCACGAACCTATGTCTTGGATCTTACCATTTCAAATAGCTTGTGCCA---TTTTTTAAAATCATGTTCACCACTTTTTGGTTGAGTCATTGTAGTCTGTAA-TTAGAGAGCCTAAAACAAGTTTTATATAAAGTTTAAAAGTACTTACACACT-AAAAAAGT--AAGAGTCAAATATAAG-AATAAATACATGGTGGGGGATAGGGAAGTGTGGTAT--CTACCGGAGTCAGATACTTCCTTCGTGCTTCCTAAATTAATCAGG-AAAGATTAATTGAAATAAAGGGCTTGGAAACCTTCTTTCAGC--TAAAA------AAAAAAAAAAAAAA-----GTCTTTCAAGTAGACCAGGAAA-GAGAATGTATA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4490545 719 + 32716333 TTCCCTTGAATCTAAACTCTGATTTGTGAAAACCCAAGAGAAGCTCTCCACATGAT-TTCACTGCTTGCCAGGTTAAACCTACAAAA-ATGGTGTATCCATATTTCGTGACTTGGCTCTGGCCAGTTAGAAAAAAGA--------CAAGCATATGGTATTACTTTCCATGACTGATGACTTCGCTCTG-CT-GACACCTTTCCTTCCCACACTGTGTACCCTACTAATGTAGCCACACA-AA------------AGAAGTCAGCCTAAAAAC--GTCCTCAGAAGCTCTCAAGTTAGATAACTCAGAAGTTTCTTGTGAACATAAGTTGAAGGTATAAAGATACAGAG-----TCATAGAGTTGGTCTGGAAA--GAAAGAACAACTTATTTTTAGTCATGGTTAGCATGAACCTATGTCTTGGATCTTACCATTTCAAATAGCTTGTGCCA---TTTTTTAAAATCATGTTCACCACTTTTTGCTTGAGTCATTGTAGTCTGGAA-TTAGAGAGCCTATAACAAGTTTTATATAAAGTTTAAAAGTACTTACACACT-AAAAAAGTAAGAGAGTCAAATATGAG-AATAAATACATGGTGAGGGACAGGGAAGTGTGGTAT--CTACCGGAGTCAGATACTTCCTTTGTGCTTCCTAAATTAATCAGG-AAAGATTAATTGAAATAAAGGGCTTGGAAACCTTCTTTCAGC--TACAA------AAAAAAAAAAAA-------GTCTTTCAAGTAGACCAGGAAA-GAGAATGTATA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168606231 716 - 198365852 TTCCCTTAAATCTAAACTCTGATTAGTGAAAA-CCAAGAGAAGCATTCCACATGAT-TTCACTACTTGCCAGGTTAAACCTACAAAAGATGGCGTATCCATATTTCATGACTTGGCTCTGGCCAGTTAGAAAAAAGA--------CAAGCATATGGTATTACTTTCCATGACTGATGACTTTGCTCTG-CT-GACACCTTTCCTTCCCACACTGTTTACCCTACTAATGTAGCCACACA-AA------------AGAAGTCAGCCTAAAAAT--GTCCTCAGAAGCTCTTGAGTTAGATAACTCAGAAGTTTCTTGTGAACATAAGTTGAAGGTATAAAGATACAGAG-----TCACAGAGTTGGTCTGGAAA--GAAAGAACAACTTATTTTTAGTCATGGTTAGCACGAACC--TGTCTTGGATCTTATCATTTCAAATAGCTTGTGCCA---TTTTTTAAAATCATGTTCACCACTTTTTGGTTGAGTCATTGTAGTCTCTAA-TTAGAGAGCCTATAACAAGTTTTATATAAAGTTTAAAAGTACTTACACACT-AAAAAAGTAAGAGAGTCAAATATAAG-AATAAATACGTGGTGAAGGATAGGGAAGCGTGGAAT--CTACTGGATTCAGATACTTCCTTTGTGCTTCCTAAATTAATCAGG-AAAGATTAATTGAAATAAAGAGCTTAGAAACCTTCTTTTAGC--AAAAG-------AAAAAAAAAAA-------GTATTTCAAGTAGACCAGGCAA-GAGAATGTATA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162269974 717 - 192294377 TTCCCTTAAATCTAAACTCTGATTAGTGAAAA-CCAAGAGAAGCGTTCCACATGAT-TTCACTACTTGCCAGGTTAAACCTACAAAAGATGGCGTATCCATATTTCATGACTTGGCTCTGGCCAGTTAGAAAAAAGA--------CAAGCATATGGTATTACTTTCCATGACTGATGACTTTGCTCTG-CT-GACACCTTTCCTTCCCACACTGTTTACCCTACTAATGTAGCCACACA-AA------------AGAAGTCAGCCTAAAAAT--GTCCTCAGAAGCTCTTGAGTTAGATAACTCAGAAGTTTCTTGTGAACATAAGTTGAAGGTATAAAGATACAGAG-----TCACAGAGTTGGTCTGGAAA--GAAAGAACAACTTATTTTTAGTCATGGTTAGCACGAACC--TGTCTTGGATCTTATCATTTCAAATAGCTTGTGCCA---TTTTTTAAAATCATGTTCACCACTTTTTGGTTGAGTCATTGTAGTCTCTAA-TTAGAGAGCCTATAACAAGTTTTATATAAAGTTTAAAAGTACTTACACACT-AAAAAAGTAAGAGAGTCAAATATAAG-AATAAATACGTGGTGAAGGATAGGTAAGCGTGGTAT--CTACTGGATTCAGATACTTCCTTTGTGCTTCCTAAATTAATCAGG-AAAGATTAATTGAAATAAAGAGCTTAGAAACCTTCTTTTAGC--AAAAG------AAAAAAAAAAAA-------GTATTTCAAGTAGACCAGGCAA-GAGAATGTATA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150965348 717 - 180432695 TTCCCTTAAATCTAAACTCTGATTAGTGAAAA-CCAAGAGAAGCGTTCCACATGAT-TTCACTACTTGCCAGGTTAAACCTACAAAAGATGGCGTATCCATATTTCGTGACTTGGCTCTGGCCAGTTAGAAAAAAGA--------CAAGCATATGGTATTACTTTCCATGACTGATGATTTTGCTCTG-CT-GACACCTTTCCTTCCCACGCTGTTTACCCTACTAATGTAGCCACACA-AA------------AGAAGTCAGCCTAAAAAC--GTCCTCAGAAGCTCTTGAGTTAGATAACTCAGAAGTTTCTTGTGAACATAAGTTGAAGGTATAAAGATACAGAG-----TCACAGAGTTGGtctggaaa--gaaagaacaacTTATTTTTAGTCATGGTTAGCACGAACC--TGTCTTGGATCTTATCATTTCAAATAGCttgtgcca---ttttttaaaatcatgttcaCCACTTTTTGGTTGAGTCATTGTAGTCTGTAA-TTAGAGAGCCTATAACAAgttttatataaagtttaaaagtacTTACACACT-AAAAAAGTAAGAGAGTcaaatataag-aataaatacGTGGTGAAGGATAGGGAAGCGTGGTAT--CTACTGGATTCAGATACTTCCTTTGTGCTTCCTAAATTAATCAGG-AAAGATTAATTGAAATAAAGAGCTTAGAAACCTTcttttagc--aaaag------aaaaaaaaaaaa-------gtatttcaagtaGACCAGGCAA-GAGAATGTATA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15054947 723 - 90373283 TTCCCTTAAATCTAAACTCTGATTAGTGAAAA-CCAAGAGAAGCGTTCCACATGAT-TTCACTACTTGCCAGGTTAAACCTACAAAAGATGGCGTATCCATATTTCGTGACTTGGCTCTGGCCAGTTAGAAAAAAGA--------CAAGCATATGGTATTACTTTCCATGACTGATGACTTTGCTCTG-CT-GACACCTTTCCTTCCCACGCTGTTTACCCTACTAATGTAGCCACACA-AA------------AGAAGTCAGCCTAAAAAC--GTCCTCAGAAGCTCTTGAGTTAGATAACTCAGAAGTTTCTTGTGAACATAAGTTGAAGGTATAAAGATACAGAG-----TCATAGAATTGGTCTGGAAA--GAAAGAACAACTTATTTTTAGTCATGGTTAGCACGAACC--TGTCTTGGATCTTATCATTTCAAATAGCTTGTGCCA---TTTTTTAAAATCATGTTCACCACTTTTTGGTTGAGTCATTGTAGTCTGTAA-TTAGAGAGCCTATAACAAGTTTTATATAAAGTTTAAAAGTACTTACACACT-AAAAAAGTAAGAGAGTCAAATATAAG-AATAAATACGTGGTGAAGGATAGGGAAGTGTGGTAT--CTACTGGATTCAGATACTTCCTTTGTGCTTCCTAAATTAATCAGG-AAAGATTAATTGAAATAAAGAGCTTGGAAACCTTCTTTTAGC--aaaagaaaaaaaaaaaaaaaaaa-------GTATTTCAAGTAGACCAGGCAA-AAGAATGTATA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21962619 728 + 50472720 TTCCCTTCAATTTAAACCCTGATTTCTGAAAACCCAAGATAAGCTTTCCATATGAT-TTTTCTACTTGCCAGACTAAACCTACAAAAGATGGTGTATCCATATTTCGTGACTTGGCTCTGGCCAGTTAGAAAAAAGA--------CAAGCATATGGTATTACTTTCCATGACTGGTGACTTTGCTCTG-CT-GACACCTTTCCTTCCCACTCTGTTTACCCTACTAATGTACCCACACA-AA------------AGAAGTCACCCTAAAAACATGTCCTCAGAAGCTCTTGAGTTAGATAACTCAGAAGTTTCTTGTGAGCATAAGTTGAAGGTATAAAGATACAGAG-----TCATAGGGTTGGTCTGGAAA--GAAAGAACAACTCATTTTTAGTCATGGGTAGCATGAACCTATGTCTTGGATCTTACCAATGCAAATAGCTTGTGTCA---TTTTTTAAAATCATGTTCACCACTTTTTGGTTGAGTCATTGTAGTCTGTAA-TTAGAGAGCTTATAACAAGTTTTATATAAAGCTTAAAAGTACTTACACACT-AAAAAAGTAAGAAAGTCAAATGTAAG-AATAATTATGTGGTGAGAGATAGGGAGGTGTGGTAT--CAACTGGATTCAGATGCTTCCTTTGTGCTTCCTAAATTAATCAGG-AAAGATTAATTGAAATAAAGATGTTGAAAACCTTCTTTTAGCTTTAAAG------AAAGAAAAAGAAAACA---GTCTCTCAATTAGACCAGGCAA-GAGAATGTATA i calJac3.chr21 I 1 C 0 s mm10.chr16 78147008 673 + 98207768 CTCTCTTCGATCCAAACTCTCATGTATCCAAC-TCAGAATCTCATTTCC-----AT-TTCTCCA-TTAATAGACTGAACCTAAGGCAGACAATGTCTCCATGTCCCACAGCTCAGCTCTAGCTAGT---AAAAAGGA--------GAAA-----GCTGGGATTTTCCATTGCTGCTCCTTTTTATCTTCCC-TGCATTATTGCTTCCTCCACTGTTCATCTTGAAAACACACAAACACA-CACTCATGCAGTGTGTAAACAATTCTCAGAAG--CTCCTGAGAAGCTCCTAAGGTGGACAGCACAGGAATGTCTTGTAAACATAAACT-AAGATA-AAAGATGTAGAG-----TCATTGACATGGTCAGTTCATTGAAAGAATAATTTCTTATAAGTTGTGGTTAGCATGAATCTATGCCCTGGGTGTTACAATTTCAAGTGGCATGTGCCATATTGTTTAAAAATAATATTCATCAC--TCAGGCTGACTCACTATAGTGTTTAACTTAGGG----------------------AAGATGGGTAGTACGAAAACTCTGAGAAAAGTAAGAAAATCAAAGAGATT-AATAATGATGTGGAGAGAAACAAAAGAG-ATACTATTGCCAATAGATTATGATATTACCTTTGTGCTTTGTAAATTTATTGGATAAATAGTaaatgaaataa---------------------aat--aaaat------aagataaaataa--------------aataagataaggtaa-gataaaataaa i mm10.chr16 I 1 I 252 s canFam3.chr31 13848526 705 + 39895921 TTCTCTTAAATCCAAATTCTTTTTTGTTAAAAGACAAGAAAAGCTCTTCATATGCTCTTCTCTAGTTGTCAGGCTAAGCCTGTTAAAGATGGCATATCCATAGTCCATGGCTCAGCACTGGCCAGTTAGAAACAGGAGATAGGAGCAAGTGTGAGGCATTAGTTTCCGTAGCTGATTACTTTGCCTTC-CCAAATGCTTTTCCTTCCCCCACTGTTCACCCTGCAAATGCATCCACACGCAA------------AAAAGTCAGCC--AAAAT--ATCCTCAGAAGCTCTTGAGTTAAATAACATGGAAATTTCTTATAAACATAAGTTGAAGGTATAGAGATATACAGATACAGTATAGAGTTGGTATGGAAA--TGAAGAATCATTTATTTTTGGTTATGGTAAGCATGAACATACATCCTGGATATTATAAGTTCCAATAGTTTGGGCCA---TTTCTTA----TATGTTCACCGCTTTTTTGTTTAGTCTCTGTGGTGTATAC--------------GACAAACCTTACATAAAGCATAAAAGTACTTATGCTCT--------TACTTAAAACAAATATAAGAAATAAAAACA---GGAGGAGTAGAGAAATCTGGTAT--CTAGTGCGTTAAGGTACTTCCTTTGTGCTTTGTAAATTAATCAGG-GAAGATAAATTGAAATAAAGTGCTGGGAGACTATCTTTCAGC--TTTAA------ATAACTTA-----------TCCTCTCAAGTAAGTCATGCAAGGAGAATATATA i canFam3.chr31 I 439 C 0 a score=561049.000000 s hg38.chr21_KI270874v1_alt 117338 175 + 166743 TTTTTCCTGAGATAAGTTGGTTAGGAAAAGGTCAACCTATGTCCTCTTTGTGGCCA-TCTTCAGAACAGTTAGATACCGAAGAGCCCAGAGAGTGCTGTAAATTGAAAATACAATTTTAATGCATTCTCATCGAAGTTGTTTCTCTTCACCTGCTGTCTGCATGTTCTGCCTAAtg s panTro4.chr21 3731268 175 + 32799110 TTTTTCCTGAGATAAGTTGGTTAGGAAAAGGTCAACCTATGTCCTCTTTGTGGCCA-TCTTCAGAACGGTTAGATACCGAAGAGCCCAGAGAGTGCTGTAAATTGAAAATACAGTTTTAATGCATTCTCACCGAAGTTGTTTCTCTTCACCTGCTGTCTGCATGTTCTGCCTAATG i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16994208 175 + 48394510 TTTTTCCTGAGATAAGTTGGTTAGGAAAAAGTCAACCTATGTCCTCTGTGTGGCCA-TCCTCAGAATGGTTGGACACCAAAGAGCCCAGAGATTGTTGTAACTTGAAAATACAATTTTAATGCATTCCCACCGAAGTTGTTTCTCTTCGCCTGCTGTCTGCGTGTTCTGCCTAATG i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4491264 175 + 32716333 TTTTTCCTGAGATAAGTTGGTTAGGAAAAAGTCAACCTATGTCCTCTGTGTGGCCA-TCCTCAGAATGGGTGGATACCAAAGGGCCCAGAGAGTGTTGTAACTTGAAAATACAATTTTAATGCATTCCCACCGAAGTTGTTTCCCTTCACCTGCTGTCTGCATGCTCTGCCTAAtg i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168606947 175 - 198365852 TTTTTCCTGAGATAAGTTGGTTGGGAAAAAGTCAGCCTATGTCCTCTGTGTGGGCA-TCCTCAGAATGGTTGGATAATGAGGAGCCCAGTGAGTGCTGTAACTGGAAAATACAGTTTTATTGCATTCCCACCGAAGTTGTTTCTCTTTACCTGCTGTCTTCATGCTCTGCCTAATG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162270691 175 - 192294377 TTTTTCCTGAGATAAGTTGGTTGGGAAAAAGTCAGCCTATGTCCTCTGTGTGGGCA-TCCTCAGAATGGTTGGATACTGAGGAGCCCAGTGAGTGCTGTAACTGGAAAATACAGTTTTATTGCATTCCCACCGAAGTTGTTTCTCTTTACCTGCTGTCTTCATGCTCTGCCTAATG i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150966065 175 - 180432695 TTTTTCCTGAGATAAGTTGGTTGGGAAAAAGTCAACCTATGTCCTCTGTGTGGGCA-TCCTCAGAATGGTTGGATACTGAGGAGCCCAGTGAGTGCTGTAACtggaaaatacagttttattgcATTCCCACCGAAGTTGTTTCTCTTTACCTGCTGTCTTCATGCTCTGcctaatg i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15055670 175 - 90373283 TTTTTCCTGAGATAAGTTGGTTGGGAAAAAGTCAGCCTATGTCCTATGTGTGGGCA-TCCTCAGAATGGTTGGATACTGAGGGGCCCAGAGAGTGCTGTAACTGGAAAATACAGTTTTAATGCATTCTCACCAAAGTTGTTTCTCTTTACCTGCTTTCTTCGTGCTCTGCCTAAtg i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21963347 172 + 50472720 TTTTTCCTGAGATAAGTTGGTTAGGAAAAAGTCAGCCTATGTCCTATGTGTGGCTG-TCCTCAGAAT-TTTGGATACTGAGGAGCCCAGAGAGTTATGTGAATTGAAAATACAATTTTAATGCATTCTCGCCAAAGTTG--TCTCTTCATCTGCTGTCTGCATGCTCTGCCTAATG i calJac3.chr21 C 0 I 438 s canFam3.chr31 13849231 164 + 39895921 TTATTCCTGAAGTAAGTCAGTTTAGACAAAGT-----------ATATGTGTGGCCACTCCTCAGAAC-TTTGGAGACTGAGTGGCTGAGACAGCATTGTCACTTGGAAATACAATTTTAATACTTTACCATCCCAATTGTTTCCCTTCATCTGCTGTCTACAAGCTCAACCTAGTG i canFam3.chr31 C 0 C 0 e mm10.chr16 78147681 252 + 98207768 I a score=10192.000000 s hg38.chr21_KI270874v1_alt 117513 4 + 166743 tttt s panTro4.chr21 3731443 4 + 32799110 TTtt i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16994383 4 + 48394510 TTTT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4491439 4 + 32716333 tttt i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168607122 4 - 198365852 TTTT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162270866 4 - 192294377 TTTT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150966240 4 - 180432695 tttt i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15055845 4 - 90373283 tttt i chlSab2.chr2 C 0 C 0 e calJac3.chr21 21963519 438 + 50472720 I e canFam3.chr31 13849395 0 + 39895921 C e mm10.chr16 78147681 252 + 98207768 I a score=473253.000000 s hg38.chr21_KI270874v1_alt 117517 186 + 166743 gttgttgtggttgttgttgctgttttgagacagag--tcgccctttcacccacgctggagtgcagtgacgcgatctcggctcactgcaacctccacgtcccgggttcaagcgatttttctctctcagcctccagagtagctgcgcctacag----gcatgcatcaccacgcccag--ctaatttttgtattttt s panTro4.chr21 3731447 186 + 32799110 gttgttgtggttgttgttgttgttttgagacagag--tcgccctttcacccacgctggagtgcagtgacgcgatctcggctcactgcaacctccacgtcccgggttcaagcgatttttctctctcagcctccagagtagctgcgcctacag----gcatgcatcgccacgcccag--ctaatttttgtattttt i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16994387 188 + 48394510 GTTGTTGTGGTGGTTGTTGTTGttttgagacagagtctcgctctttcacccacgctgcagtgcagtgacgcgatctcggctcactgcaacctccaagtcccaggttcaagcaatttttctctctcaacctccagagtagctgcaactacag----gcatgcaccaccatgcccag--ctaatttttgtattttt i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4491443 188 + 32716333 gttgttgtggttgttgctgttgttttgagacagagtctcgctctttcacccacgctggagtgcagtgatgcgatcttggctcactgcaacctccacgtcccgggttcaagcgatttttctccctcagcctccagagtagctgcaactacag----gcatgcatcaccacgcccag--ctaatttttgtattttt i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168607126 186 - 198365852 GTTGTTGTA------GTTGTTGttttgagacagagtctcactctttcacccaggctggagtgcagtgacgcgatctcggctcactgcaacctccacctcccgggttcaagggatttttctgtcttagcctccagagtagctgggactactgagcagcatccaccaccacgcccag--ctaatttttgtattttt i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162270870 186 - 192294377 GTTGTTGTA------GCTGTTGttttgagacagagtctcactctttcacccaggctggagtgcagtgacgcgatcttggctcactgcaacctccacctcccgggttcaagggatttttctgtcttagcctccagagtagctgggactactgagcagcatccaccaccacgcccag--ctaatttttgtattttt i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150966244 189 - 180432695 gttgttgta---gttgttgttgttttgagacagagtctcactctttcacccaggctggagtgcagtgacgcgatctcggctcactgcaacctccacctcccggattcaagggatttttctgtcttagcctcccgagtagctgggactacagagtagcatccaccaccacgcccag--ctaatttttgtattttt i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15055849 189 - 90373283 gttgttgta---gttgttgttgttttgagacagagtctcactctttcacccaggctggagtgcagtgacgcgatctcggctcactgcaacctccacctcccggcttcaagcgatttttctgtcttagcctccagagcagctgggactacagagtagcatccaccaccacacccag--ctaatttttgcattttt i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21963957 186 + 50472720 gtggtggtggtggcggcggtggttttgagacagag--tcatcttttcccccaggctggagtgcagtgatatgatctcggctcactgcaaactccacctcccaggttcaagtgatttttctgtttcagactcctgagtagctgagactatgg----gtgtgcatcaccatgcgcag--ctcattttggtattttt i calJac3.chr21 I 438 C 0 s canFam3.chr31 13849395 67 + 39895921 ---------------------GTTTTTAAA--------------------------------------------------------------------CCCAAATACAATTAATTGCTTTTTATTA--------------------------------------ATAATATCCAGATCTAAATTTTGTGTTTTT i canFam3.chr31 C 0 C 0 e mm10.chr16 78147681 252 + 98207768 I a score=344567.000000 s hg38.chr21_KI270874v1_alt 117703 128 + 166743 agtggaggggggcgggtttcaccatgttggccaggctgctctcgaactcctgacctcaatgatccgcctgcctcagcctccaaaactactggggttacagctatgagccaccttgcccagGATACTGT s panTro4.chr21 3731633 128 + 32799110 agtggaggggggcgggtttcaccatgttggccaggctgctctcgaactcctgacctcaatgatccgcctgcctcagcctccaaaactactggggttacagctatgagccaccttgcccagGATACTGC i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16994575 125 + 48394510 agtagaggtg---gggtttcaccatgttggccaggctggtctcgaactcctgacctcaatgatccacctgcctcagcctccaaaactactgggattacaggtataagccaccttgcccagGATACTGC i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4491631 127 + 32716333 agtggggggagg-gggtttcaccatgttggccaggctggtctcgaactcctgacctcaatgatccacctgcctcagcctccaaaactactgggattaccagtatgggccaccttgcccagGATACTGC i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168607312 126 - 198365852 ggtagagaagg--aggtttccccatgttggtcaggctggtctcgaactccttacctcaatgatcctcctgcctcagcccctgaaactactgggattacaggcatgagccaccttgcccagGATACTGC i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162271056 126 - 192294377 ggtagagaagg--aggtttccccatgttggtcaggctggtctcgaactccttacctcaatgatcctcctgcctcggcccctgaaactactgggattacaggcatgagccaccttgcccagGATACTGC i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150966433 126 - 180432695 ggtagagaagg--gggtttccccatgttggttaggctggtctcgaactccttacctcaatgatcctcctgcctcggcccctgaaactactaggattacaggcatgagccaccttgcccaggaTACTGC i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15056038 126 - 90373283 agtagagaagg--gggtttccccatgttggccaggctggtctcgaactccttacctcaatgatcctcctgccttggcccctgaaactactgggattacaggcatgagccaccttgcccagGATACTGC i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21964143 124 + 50472720 agtaaagtgg---ggatttcaccatgttggacagactagtctcgaacttctgacctcaatgatccgcctgcctcagcctccaaag-tcctgggattacaggggtgagccaccttgctcagGATACTGC i calJac3.chr21 C 0 C 0 e canFam3.chr31 13849462 0 + 39895921 C e mm10.chr16 78147681 252 + 98207768 I a score=195293.000000 s hg38.chr21_KI270874v1_alt 117831 62 + 166743 CTAGTGTTTTTAAAATGCAAATGTGATCACTTTTTATTAATGTGACCTAGACATATGTTTCA s panTro4.chr21 3731761 62 + 32799110 CTAGTGTTTTTAAAATGCAAATGTGATCACTTTTTATTAATATGACCTAGACCTATGTTTCA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16994700 62 + 48394510 CTAGTGTTTTTAAAATGCAAATGCGATCACTTTTTATTAATATTACCTAGACCTATGTTTCA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4491758 62 + 32716333 CTGGTGTTTTTAAAACGCAAATGCAATCACTTTTTATTAATATTACCCAGACCTATGTTTCA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168607438 62 - 198365852 CTAGTGTTTTTAAAACCCAAATGCCATCACTTTCTATTAATATTACCTAGACCTATGTTTCA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162271182 62 - 192294377 CTAGTGTTTTTAAAACCCAAATGCCATCACTTTCTATTAATATTACCTAGACCTATGTTTCA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150966559 62 - 180432695 CTAGTGTTTTTAAAACCCAAATGCCATCACTTTCTATTAATATTACCTAGACCTATGTTTCA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15056164 62 - 90373283 CTAGTGTTTTTAAAACCCAAATGCCATCACTTTCTATTAATATTACCTAGACCCATGTTTCA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21964267 62 + 50472720 CTAGTGTTTTTAAAACCAAAATGCAGTCACTTTTTATTAATATTACCTAGACCTATGTTTCA i calJac3.chr21 C 0 C 0 s mm10.chr16 78147933 61 + 98207768 CTAGCATGTTTTAAGTCT-AATGAAATCACAATTTGCTCATCATACCTTAGCCAGTGTTTCA i mm10.chr16 I 252 C 0 e canFam3.chr31 13849462 0 + 39895921 C a score=739036.000000 s hg38.chr21_KI270874v1_alt 117893 218 + 166743 TTGTTCAAGAAAAGCACTCTCCCCTTGATTTCTAAAACCAGAAAATATAAAGCTGAGAGTGATTA-TTTCATTCATGCAAC--------------AAATATATTTGTGTATCTATTACAGGTTCAGCCTTGTATTCATTCCATTCTTCATTTCCCACATGCGAAATCTAAAACTCAGAGATTTG-AAATCTCTTAACTGAGTTCACAAATCAGGACAAATTTTTCTTAGAAT----AC s panTro4.chr21 3731823 218 + 32799110 TTGTTCAAGAAAAGCACTCTCCCCTTGATTTCTAAAACCAGAAAATATAAAGCTGAGAGTGATTA-TTTCATTCATGCAAC--------------AAATATATTTGTGTATCTATTACAGGTTCAGCCTTGTATTCATTCCACTCTTCATTTCCCACATGCGAAATCTAAAACTCAGAGATTTG-AAATCTCTTAACTGAGTTCACAAATCAGGACAAATTTTTCTTAGAAT----AC i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16994762 218 + 48394510 TTGTTCAAGGAAAGCACTCTCCCCTTGATTTCTAAAACCAGAAAATTTAAAGCTGGGAGTGATTA-TTTCATTCATGCAAC--------------AAATATATTTGTGTATCTATTACAGGTTCAGCCTTGTattcattccactcttcatttcccagatgagaaatctaaaactcagagatttg-aaatctcttaaccgagttcacaaatcaggacaaatTTTTCTTAAGAG----AC i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4491820 202 + 32716333 TTGTTCAAGGAAAGCACTCTCCCCTTGATTTCTAAAACCAGAAAATATAAAGCTGGGAGTGATTA-TTTCATTCATGCAAC--------------AAATATATTTGTGTATCTATTACAGGTTCAGCCTTGTattcattccacccttcatttcccagatgagaaatctaaaactcagagaTTT-----------------GTTCACAAATCAGGGCAAATTTTTCTTAAAAG----AC i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168607500 214 - 198365852 TTGTTCAAGGAAAGCACTCTCCCGTTGATTTCTAAAACCAGAAAATACAAAGCTGGGAGAGATTA-TTTCATTCATACAAC--------------AAATATATTTGTGTATCTACTACAGGTTCAGCCTTGt----attccactcttcatttcacagatgagaaatctaaaactcagagatttg-aaatctcttaaccaagttcacaAATCAGGACAAATTTATCTTAAAAC----AT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162271244 214 - 192294377 TTGTTCAAGGAAAGCACTCTCCCGTTGATTTCTAAAACCAGAAAATACAAAGCTGGGAGAGATTA-TTTCATTCATACAAC--------------AAATATATTTGTGTATCTACTACAGGTTCAGCCTTGt----attccactcttcatttcacagatgagaaatctaaaactcagagatttg-aaatctcttaaccaagttcacaaatcaggacaAATTTATCTTAAAAC----AT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150966621 213 - 180432695 TTGTTCAAGGAAAGCACTCTCCCGTTGATTTCTAAAACCAGAAAATACAAAGCTGGGAGAGATTA-TTTCATTCATACaac--------------aaatatatttgtgtatctacTACAGGTTCAGGCTTGT----ATTCCactcttcatttcacagatgagaaatctAAAACTCAGAGATTTG-AAATCTCTTAACCAAGTTCAC-AATCAGGACAAATTTATCTTAAAAC----AC i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15056226 215 - 90373283 TTGTTCAAGGAAAGCACTCTCCCGTTGATTTCTAAAACCAGAAAATACAAAGCTGGGAGAGATTA-Tttcattcatacaac--------------aaatatatttgtgtgtctactacaggttcagccttgt----attccactcttcatttcgcagatgagaaatccaaaactcagagatttgaaaatctcttaaccaagttcacaaatcaggacaAATTGATCTTAAAAC----AT i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21964329 214 + 50472720 TTGTTTAAGGAAAGCACTCTCCCCTTGATTTCTAAAAACAGAAAATATAAAACTGGGAGTTACTCTTTTCATTCATGCAAC--------------AAATATATCTGTATATCTACTACAGGTTCAGCTTTGT----ATTCCG-Tcttcattctacagatgagaaaagtaaaactccaagatttg-aaatctcttaaccaaattcacaAATCAGAACAAATTTATCTGAAAAG----AC i calJac3.chr21 C 0 C 0 s mm10.chr16 78147994 227 + 98207768 CCTTTCAGTGAAAGCTCCCCACCCTTGAGTTATAAA-----AAAGTCAAAGGCTGAAAGTAATTC-TTTCACTCCTGCAAAAAAAAAAAAAAAAGAAAAAGATTCTAACGTCTGCTGGACACTCCGACTTTT----GTTCCTTGTTtcatgtcacagaggatgaaactgaaacccagagacttt-taatgtcctaaccaagttcacaAGTCAGAAGAAATCTATATGAAAAGCTCAAA i mm10.chr16 C 0 C 0 s canFam3.chr31 13849462 213 + 39895921 TTTTTTAAGGAAAGAACCTCAGCCTTGATTTATAAAATCA-CAAACATAAAGCTGGAAGTAATTC-TTCTATTCCTAAAAT--------------AAGTATCTTTGCACACCTGCTTGAGGTTCAGCCTTTT----ATGGacaccctcctttcacagatgagaaaactcaaacccaaagattta-aaatgtctcaatcaagttcacaAATCAGGACAAATTTGTTTTAAAAG----AC i canFam3.chr31 C 0 I 442 a score=834025.000000 s hg38.chr21_KI270874v1_alt 118111 280 + 166743 AGAAATAGTTTGAGCCTATGAAAACTAAGTCTGTTTAAATCCAGGTAGTAACACAGTTGGTTTCCTTCTTCTGAGCCTTTCAGGAAATATTAATGTAGAA--AAAAA---TCTGCTGTTACAGACATGCAAGGTGTATCTTGCCGCatgagaa-ttacttaatgggtacaatgcacattatttgggtggtggctaccctaaagccttgacttggcccccatgcaatctaggcatgcaacaaaattttacctgtgccccatacccttatataaattaaaa----aaAAAAA s panTro4.chr21 3732041 282 + 32799110 AGAAATAGTTTGAGCCTATGAAAACTAAGTCTGTTTAAATCCAGGTAGTAACACAGTTGGTTTCCTTCTTCTGAGCCTTTCAGGAAATATTAGTGTAGAA--AAAAA--ATCCGCTGTTACAGACATGCAAGGTGTATCTTGCCGCataagaaattacttaatgggtacaatgcacattatttgggtggtggctaccctaaagccttgacttgaccaccatgcaatctaggcatggaacaaaattttacctgtaccccatacacttatataaattaaaa----aaAAAAA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16994980 278 + 48394510 AGAAATAATTTGAGCCTATGAAAACTAAGTCTGTTTAAATCCAGTTAGTAATATAGTTGGTTTCCTTCTTCTGAGCCTTTCAGGAAATATTAATGTAGAA--AAAAA---TCTGCTGTTACAGACATGCAAGATGTATCTTGCTGCatgagaaattacttaatgggtacaatgtacattatttgggtggtggctaccttaaagccttgaactgaccaccatgcaatctaggcatggaacaaaattttacccgtaccccatacacttacataaatt---a----aaaaaAA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4492022 281 + 32716333 AGAAATAGTTTGAGCCTATGAAAACTAAGTCTGTTTAAATCCAGTTAGTAATATAGTTGGTTTCCTTCTTCTGAGCCTTTCAGGAAATATTAATGTAGAA--AAAAA---TCTGCTGTTACAGACATGCAAGGTGTATCTCGCTGCatgagaaattacttaatgcgtacaatgtacattatttgggtggtggctacactaaaaccttgacttgaccaccatgcaatctaggcatggaacaaaattttacctgtaccccacacacttatatacatttaaa----aaaaAAA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168607714 280 - 198365852 GGAAGTAGTCTGAGCCTATGAAAACTAAGTCTGTTTAAATCCAGTTAGTAATATAGTTGGTTTCCGTCTTCTGAGCCTTTCAGGAAATATTAATGTAGAA--AAAAG---TCTGCTGTTACAGACATG-AAGGTATATCTTGCTACatgagaaattacttaataggtacaatgtacattattttggtggtggctagcctaaagccttgacttgaccaccatgcaatctaggcatgcaacaaaattttacgtgtaccccgtacatttatataaattaaaa----aaCAAAA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162271458 280 - 192294377 GGAAGTAGTCTGAGCCTATGAAAACTAAGTCTGTTTAAATCCAGTTAGTAATATAGTTGGTTTCCGTCTTCTGAGCCTTTCAGGAAATATTAATGTAGAA--AAAAG---TCTGCTGTTACAGACATG-AAGGTATATCTTGCTACatgagaaattacttaataggtacaatgtacattattttggtggtggctagcctaaagccttgacttgaccaccatgcaatctaggcatgcaacaaaattttacgtgtaccccgtacatttatataaattaaaa----aaCAAAA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150966834 280 - 180432695 AGAAGTAGTCTGAGCCTATGAAAACTAAGTCTGTTTAAATCCAGTTAGTAATATAGTTGGTTTCCGTCTTCTGAGCCTTTCAGGAAATATTAATGTAGAA--AAAAG---TCTGCTGTTACAGACATG-AAGGTATATCTTGCTgcatgagaaattacttaataggtacaatgtacattattttgaTGGTGGCTAGCCTAAAGCCTTGACTTGACCACCATGCAATCTAGGCATGCAACAAAATTTTACGTGTACCCcgtacatttatataaattaaaa----aacaaaa i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15056441 280 - 90373283 GGAAGTAGTTTGAGCCTATGAAAATTAAGTCTGTTTAAATCCAGTTAGTAATATCGTTGGTTTCCGTCTTCTGAGCCTTTCAGGAAATATTAATGTAGAA--AAAAG---TCTGCTGTTACAGACATG-AAGGTGTATCTTGCTGCatgagaaattacttaataggtacaatgtacattatttggatggtggctagcctaaagctttgacttgaccaccatgcaatctaggcatgcaacaaaattttacctgtaccccatatatttatataaattaaaa----aaAAAAA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21964543 283 + 50472720 AGAAGTCTTCTGAGTCTATGAAAACTACGTCTGTTTAAATCCAGTTAGTAATA----TGGTTTCCTTCTTCTGAGCCTTTCAGGAAATATTAGTATAGAA--AAAAA-AATCTGCTGTTACAGACACACAAGGTATATCTTGCTGCataagaaattatttaaggggtacaatgtacgttattcaggtggtggctaccctaaagcctagacttgaccaccatgcaatctaggtatgtaacaaaattttacctgcacctcatacatttatataaataaTAATTTCAAAAAAC i calJac3.chr21 C 0 C 0 s mm10.chr16 78148221 157 + 98207768 GAAAGTGCTATGAGCTCA---------------TTTAAACCCAGTTATTGGTATAGCTGGGTTTCTTCTTCTAAGCATTTCACAAAATATTAATGTAGGA--AAAAAAAATCTTTTGTGGCAACCCAG--ATGTGACTCTTGCTGCAATAAAGAATACT---------------------------------------------------------ATCATG---TCCAGATGAGC------------------------------------------------------ i mm10.chr16 C 0 C 0 s canFam3.chr31 13850117 163 + 39895921 aGAGGTAGACCGAGTCTATGAACACTAATTCACTTTAAATCCAGTTCTTAATAGAGTTGGTTTCCTTCTGCTGACCCTTTCAGGAAATATTAATCTAGAAGGAAAAA---TCTGCTATAGCAGTCATGCAGCGTATATCTTGATGCAATAGAGAA-ACTCA-------------------------------------TAAAGC-------------------------------------------------------------------------------------- i canFam3.chr31 I 442 C 0 a score=2597921.000000 s hg38.chr21_KI270874v1_alt 118391 890 + 166743 A---ACTTTACAAAGGTCAGGTCA-TCCAAGAATCAACAGCATTTAGATAGATGTTTTAGGTccctgtagctcaaagtatggccctgagattatcagcacctgggaacttattagaaatgcagaatcttaggccccatccagagttcctcaattatttctgcattttaacaatatcctccaggtgatttgtatatgcattattaaactttgaaaagtactgTTTTAAATGATCTT-GAAAATAACTTATAATCTTAAAAATGCATGAGCTAAAA----------------------------------------------------TGTGTGTGTTTTAATGAAATCAGGGGTATATTATTATTCAAAGTAATTCCAGTGTGA--ATCTTTTC--AAAGTGAAGAATCTCTTTTAAAAACAAATTATCTCCAATCTATTTTGGATATTAATAGGGATTTGTTTGTACATGGACTTCCTATTGTATAAGATGAGGTCAATATAGGAATCATGGAAGCAAGAGTGTGAAGAAATAAAATGCCTTCAAAAGAATACATTGAACAAGCAATACATAAATTGCTTTTATTTAGAAA------TG-------------CATTAGTTCAAAGATGATTTATACAGAATTTATTTTAATTCAGTAAGATGTTGGGTGAAATTACCTTT-CACTATTTATAAACAAAGATAACTC-TATATTA---ATTCCAAATAAAAAATTTTCATTCTTAGAG------------------------------------------AAAAGCATTATTTTACAAATTTTCAGGTCTCTATTTACACACAAGTAATTGCTATGTAAGCAAGAGCAAGTATTGT--TGTTTGTACACTCTACTAATTGC-AAATGATTCTTAGCTAGTAATTAAAGTAACTTTAAAAAGA-CAACATTTGGTTTACTTGGTTTGCCTGGCTGTGCACATAAAAATAATCAAACCG----TCTTTAAAG-CCAGAAGACTATCCATGAATTTAGAG s panTro4.chr21 3732323 890 + 32799110 A---ACTTTTCAAAGGTCAGGTCA-TCCAAGAATCAACAGCATTTAGATAGATGTTTTAGGTccctgtagctcaaagtatggccctgagattatcagcacctgggaacttattagaaatgcagaatcttaggccccatccagagttcctcaattatttctgcattttaacaatatcctccaggtgatttgtatatgcattattaaactttgaaaagtactgTTTTAAATGATCTT-GAAAATAACTTATAATCTTAAAAATGCATGAGCTAAAA----------------------------------------------------TGTGTGTGTTTTAATGAAATCAGGGGTATATTATTATTCAAAGTAATTCCAGTGTGA--ATCTTTTC--AAAGTGAAGAATCTCTTTTAAAAACAAATTATCTCCAATCTATTTTGGATATTAATAGGGATTTGTTTGTACATGGACTTCCTATTGTATAAGATGAGGTCAATATAGGAATCACGGAAGCAAAAGTGTGAAGAAATAAAATGCCTTCAAAAGAATACACTGAACAAGCAATACATAAATTGCTTTTATTTAGAAA------TG-------------CATTAGTTCAAAGATGATTTATACAGAATTTATTTTAATTCAGTAAGATGTTGGGTGAAATTACCTTT-CACTATTTATAAACAAAGATAACTC-TATATTA---ATTCCAAATAAAAAATTTTCATTCTTAGAG------------------------------------------AAAAGCATTATTTTACAAATTTTCAGGTCTCTATTTACACACAAGTAATTGCTATGTAAGCAAGAGCAAGTATTGT--TGTTTGTACACTCTACTAATTGC-AAATGATTCTTAGCTAGTAATTAAAGTAACTTTAAAAAGA-CAACATTTGGTTTACTTGGTTTGCCTGGCTGTGCACATAAAAATAATCAAACCG----TCTTTAAAG-CCAGAAGACTATCCATGAATTTAGAG i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16995258 891 + 48394510 A---ACTTTACAAAGATCAGATCA-TCCAAGAATCAACAGCATTTAGATAGATGTTTTAGGTCCCTGGAGctcaaagtatggccctgagattatcagcacctgggaacttactagaaatgcagaatcttaggccccatccagagttcctcaattatttctgcattttaacaatatcctccaggtgatttgtatatgcattattaaactttgaaaactactgTTTTAAATGATCTT-GAAAATAACTTATAATCTTAAAAATGCATGAGCTAAAA----------------------------------------------------TGTGTGTGTTTTAATGAAATCAGGGGTATATTATTATTCAAAGTAATTCTGGTGTGA--ATCTTTTC--AAAGTGAAGAATCTCTTTTGAAAACAAATTATCTCCAATCTATTTTGGGTATTAATAGGGATTTGTTTGTACATGGACTTCCTAATATATAAGATGAGGTCAATATAGGAATCAAGGAAGCAAAAGTGTGAAGAAATAAAATGCCTTCAAAAGAATA-ATTGAACAAGCAATACATAAATTGCTTTTATTTAGAAA------TG-------------CATTAGTTCAAAGATGATTTATACAGAATTTATTTTAATTCAGTAAGATGTTGGGTGAAATTACCTTT-CACTATTTATAAACAAAGATACCTC-TATATTA---ATTCCAAATAAAAAATTTTCATTCTTAGAG------------------------------------------AAAAGCATTATTTTACAAATTTTCAGGTCTCTATTTACACACAAGTAATTGCTATGTAAGCAAGAGCAAGTATTGTTATGTTTGTACACTCTACTAACTGC-AAATGATTCTTAGCTAGTAATTAAAGTAACTTTAAAAAGA-CAACATTTGGTTTACTTGGTTTGCCTGGCTGTGCACATAAAAATAATCAAACTG----TCTTTAAAG-CCAGAAGACTATCCATGAATTGAGAG i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4492303 887 + 32716333 A---ACTTTACAAAGATCAGATCA-TCCAAGAATCAACAGCATTTAGATAGATGATTTAGGTccctgtagctcaaagtatggccctgagattctcagcacctgggaacttattagaaatgcagaatcttaggccccacccagagttcctcaattatttctgcattttaacaatatcctccaggtgatttgtatatgcattattaaactttgaaaagtactgTTTTAAATGATCTT-GAAAATAACTTATAATCTTAAAAATGCATGAGCTAAAA----------------------------------------------------TGTGTGTGTTTTAATGAAATC--GGGTATATTATTATTCAAAGTAATTCTGGTGTGA--ATCTTTCC--AAAGTGAAGAATCTCTTTTAAAAACAAATTATCTCCAATCTATTTGGGGTATTAACAGAGATTTGTTTGTACATGGACTTCCTATTGTATAAGATGAGGTCAATATAGGAATCAAGGAAGCAAAAGCGTGAAGAAATAAAATGCCTTCAAAAGAATACATTGAACAAGCAAGACATGAATTGCTTCTATTTAGAAA------TT-------------CATTAGTTCAAAGATGATTTATACAGAATTTATTTCAATTCAGTAAGATGTTGGGTGAAATTACCTTT-CACTATTTATAAACAAAGATAACAC-TATATTA---ATTCCAAATAAGAATTTTTCATTCTTAGAG------------------------------------------AAAAGCATTATTTTACAAATTTTCAGGTCTCTATTTACACCCAAGTAATTGCTATGTAAGCAAGAGCAAGTATTGTTATGCTTGTACACTCTACTAATTG---AATTCCACCACATTGG--AATAAAGTAACTTAAAAAAGACCACCATTTGGGTTACTTGTTTGGCGGGCCGGGCCACAAAAAAATAATCAAACTG----TCTTTAAAACCCAGAAGACTATCC-TGAATTTAGAG i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168607994 907 - 198365852 A---ACTTTAGAAAGATCAGATCA-TCCAAGAATCAACAGCATTTAGATAGACATTTTAGGTCCCTCTATctcaaagtatgg-cctcagattatcagcacctgggaacttactagaaatgcagaatcttaggccccatccagagttcctcgattatttctgaattttaacaatatcctccaggtgatttgtatacgtattattaacctttgaaaagtactgTTTTAAATGATCTT-GAAAATAATTTATAATCTTAAAAATGTATTAGCTAAAA----------------------------------------------------TGTGTGTGTTTAAATGAAATCAGGGCTATATTATTATTCAAAGTAATTCTGGTGTGA--ATCTTTTC--AAAGTGAAGAATCTCTTTTAGAAACAAATGATCTCCAATCTATTTTGGGTGTTAATAGGGACTTGTTTGTGCATGAACTCCCTATTGTATAAGATGAGGTCCATATAGGAATCAAGGAAGCAAAAGTGTGAAGAAATAAAATGCCTTCAAAAGAATACATTGAACAAGCAATACATAAATTGCTTTTATTTAGAAA------TG-------------CATTAGTTTAAAGATGATTTATACAGAATTTATTTTAATTCAGTAAGAAGTTGCGTGAAATTACCTTT-CAC----TATAAACAAAGATAACTC-TATATTA---ATTCCAAATAAAAAATTTTCATTCTTAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN----------------------ACAAGTCTCTATTTACACACAAGTAATTGCTATGTAAGCAAGAGCAAGTATTGTTATGTTTGTACACTCGACTAATTGC-AAATGATTCTTAGCTAGTAATTAAAGTAACTTTAAAAAGG-CAACATTTGGTTTACTTGGTTTGCCTGGCTGTGCACATAAAAATAATCAAACTG----TCTTTAAAG-CCAGAAGACTGTCCATGAATTTAGAG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162271738 881 - 192294377 A---ACTTTAGAAAGATCAGATCA-TCCAAGAATCAACAGCATTTAGATAGACATTTTAGGTCCCTCTATctcaaagtatgg-cctcagattatcagcacctgggaacttactagaaatgcagaatcttaggccccatccagagttcctcgattatttctgaattttaacaatatcctccaggtgatttgtatacgtattattaacctttgaaaagtactgTTTTAAATGATCTT-GAAAATAATTTATAATCTTAAAAATGTATTAGCTAAAA----------------------------------------------------TGTGTGTGTTTAAATGAAATCAGGGCTATATTATTATTCAAAGTAATTCTGGTGTGA--ATCTTTTC--AAAGTGAAGAATCTCTTTTAGAAACAAATGATCTCCAATCTATTTTGGGTGTTAATAGGGACTTGTTTGTGCATGAACTCCCTATTGTATAAGATGAGGTCCATATAGGAATCAAGGAAGCAAAAGTGTGAAGAAATAAAATGCCTTCAAAAGAATA-ATTGAACAAGCAATACATAAATTGCTTTTATTTAGAAA------TG-------------CATTAGTTCAAAGATGATTTATACAGAA-----TTTAATTCAGTAAGAAGTTGGGTGAAATTACCTTT-CAC----TATAAACAAAGATAACTC-TATATTA---ATTCCAAATAAAAAATTTTCATTCTTAGAG------------------------------------------AAAAGCATTATTTTACACATTTACAAGTCTCTATTTACACACAAGTAATTGCTATGTAAGCAAGAGCAAGTATTGTTATGTTTGTACACTCGACTAATTGC-AAATGATTCTTAGCTAGTAATTAAAGTAACTTTAAAAAGG-CAACATTTGGTTTACTTGGTTTGCCTGGCTGTGCACATAAAAATAATCAAACTG----TCTTTAAAG-CCAGAAGACTGTCCATGAATTTAGAG i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150967114 887 - 180432695 a---actttagaAAGATCAGATCA-TCCAAGAATCAACAGCATTTAGATAGACGTTTTAGGTCCCTCTATCTCAAAGTATGG-CCTCAGATTATCAGCACCTGGGAACTtactagaaatgcagaatcttaggcCCCATCCAGAGTTCCTCgattatttctgaattttaacaaTATCCTCCAGGTGATTTGTATACGTATTATTAACCTTTGAAAAGTACTGTTTTAAATgatctt-gaaaataatttataatcttaaaaatgtattagctaaaa----------------------------------------------------tgtgtgtgtttaaatgaAATCAGGGCTATATTATTATTCAAAGTAATTCTGGTGTGA--ATCTTTTC--AAAGTGAAGAATCTCTTTTAGAAACAAATGATCTCCAATCTATTTTGGGTGTTAATAGGGACTTGTTTGTGCATGAACTCCCTATTGTATAAGATGAGGTCCATATAGGAATCAAGGAAGCAAAAgtgtgaagaaataaaatgccTTCAAAAGAATACATTGAACAAGCAATACATAAATTGCTCTTATTTAGAAA------TG-------------CATTAGTTCAAAGATGATTTatacagaatttattttaattcagtaaGAAGTTGGGTGAAATTACCTTT-CAC----TATAAACAAAGATAACTC-TATATTA---attccaaataaaaaattttcattcCTAGAG------------------------------------------AAAAGCATTATTTTACACATTTACAAGTCTCTATTTACACACAAGTAATTGCTATGTAAGCAAGAGCAAGTATTGTTATGTTTGTACACTCGACTAATTGC-AAATGATTCTTAGCTAGTAATTAAAGTAACTTTAAAACGG-CAACATTTGGTTTACTTGGTTTGCCTGGCTGTGcacataaaaataatcaaactg----TCTTTAAAG-CCAGAAGACTGCCCATGAATTTAGAG i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15056721 891 - 90373283 AAACACTTTAGAAAGATCAGATCA-TCCAAGAATCAACAGCATTTAGATAGACGTTTTAGGTCCCTACACctcaaagtatggccctcagattatcagtacctgggaacttactagaaatgcagaatcttaggccccatccagcgttcctcaattatttctgaattttaacaatatcctccaggtgatttgtatatgtattattaacctttgaaaagtactgTTTTAAATGATCTT-GAAAATAATTTATAATCTTAAAAATGTATTAGCTAAAA----------------------------------------------------TGTGTGTGTTTAAATGAAATCAGGGCTATATTATTATTCAAAGTAATTCTGGTGTGA--ATCTTTTC--AAAGTGAAGAATCTCTTTTAGAAACAAATGATCTCCAATCTATTTTGGGTGTTAATAGGGACTTGTTTGTGCATGGACTCCCTATTGTATAAGATGAGGTCCATATAGGAATCAAGGAAGCAAAAGTGTGAAGAAATAAAATGCCTTCAAAAGAATACATTGAACAAGCAATACATAAATTGCTCTTATTTAGAAA------TG-------------CATTAGTTCAAAGATGATTTATACAGAATTTATTTTAATTCAGTAAGAAGTTGGGTGAAATTACCTTT-CAC----TATAAACAAAGATAACTC-TACATTA---ATTCCAAATAAAAAATTTTCATTCTTAGAG------------------------------------------AAAAGCATTATTTTACAAATTTACAAGTCTCTATTTACACACAAGTAATTGCTATGTAAGCAAGAGCAAGTATTGTTATGTTTATACACTCGACTAATTGC-AAATGATTCTTAGCTAGTAATTAAAGTAACTTTAAAAAGG-CAACATTTGGTTTACTTGGTTTGCCTGGCTGTGCACATAAAAATAATCAAACTG----TCTTTAAAG-CCAGAAGAGTGTCCATGAATTTAGAG i chlSab2.chr2 C 0 C 0 s mm10.chr16 78148378 897 + 98207768 -------------------------CCCAAGAATT-GCAACATTTGAAAACATGGCTTAGGTCTTTCACT-----GGGGCAGCCCTACAGTCAGAAGTTTCAgggtgcttgttaggaatgcatcatcttgagcttcacccaacacctctaaattactcctgccttctaacaatgtacttcaggttagtcctatatg---tgttaaagtttgaaa--cactgTCTTGAATGTGATTGGAAAAAAACTTCCAACCATAATAATATATGAGCTAAGAtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtTTAAATAATACCAAGGGGGTATTATCCCTCAAAGTAACTTGGGTATGGGTATTTTTAT--AAAGTGTTAAATCCCTTCTA-ACACAAATGATCTCCTATTTATCGTAGATGAAAATAGAAGATT-TCTGTAAGTCGACTTTCTGTTGCATAA---------CGCTCAAGAACCAAAGGAAAGCAAGCATGAAGAAATAAAATATTCTTAAAAGAATCTCTGAGGCAAGCTATATATTAATTTCTGTTATTTGGAAACATGCTTG-------------CTCAAGTTTCAAACTTGATTACATCAAATTTATTTTTATTTAGTCAGAGTTCAGGAGAAATTCTGTTG-ACCTCTTGATAGATAAAAAAGGTTT-TTAACTATGTAATCCTCATAAA-----TTTATTTTGAGAA------------------------------------------GCACACACTA----ACAAATGTGTGGTCCTCTATTTCCATATACCTCATTGTTATGTAAGCAAGAATAAGTATTGTTTTGTTTGTTCAGCCTGCCAATAGC-ACATGGTTCTTGACTAACAGTTAAA-TAACTTTATGAAGG-CAGAAG---------TAGCTGTGTGTGGCTGTTCACATAAAAATAATAAAACTAAAATTCTCTTAAA--TGATAGATTATCTCTGAATTTAAAC i mm10.chr16 C 0 C 0 s canFam3.chr31 13850280 876 + 39895921 --------------AATCAGCTCACCCCAAGAATC-ATTGCATTTAGAAAGATGCTTTAGATTCTTAAAactccaagtatggtccttggatcagcagcacctggg-gcttgttagaaatgcaggatctcaggcctga---agag-tactgaaacacttctgcattttaacaatattc-ccaggtaatgtgtatatg---cactgaagtttgaaaagcactATTTTAGATGATCTT-G-AAATAGCTTCTAATGTTAAGAATGTGTGAGTTAAAA----------------------------------------------------TGGGTGTGTTTAAATGGTATCAAGAGTATCTTAGTATTCAAAGTAATTCTGTTGTGA--ATATTTTCATAAAGTGAAGAATCTCTT---AAAATAAATTATCTCCAATTTATCTTAGGTGTCAATGGGGAATT-CTCATACATGGATTTTATATTATATAAGATAGGGCCAATCTAGAAATCATAGAAGTAGAAGCATGAAGAAATAAAATGCTCTCAAAAGAAAATATTAGGGAAGCAATACATAAGTTGCTCTAATTTGAAAA------TGCACCTCTACAGTTCATTAGTTCAAAACCGACTTATACAGAATTTATTTTAATTCAGTCTAAAGTTGGGTGAAATTACTTTTGCACTATTTACAGTCAAGTAAGTCTCATAAGTCA---ATTCCAAAGAAATAATTTTC-TTCTTAAAG------------------------------------------AAAAATATTATTTTTCAAATTTACAAGTCCCTATTTTCATACAAGTAATTGCTATATAAGCAAGAGCAAGTATTGT-----TTGTACACTCTACTAATTACTAAATGATTCTTAGCTAGTAATTAAAATAACTTTAAAAAGG-CAACATTTGGTTTATTTGGTTTGCCTGGCTGTGCACATAAAAACAATAAAA-------ATTTTAAAG-CCTGTAAACTATCCATGAATTTAAAC i canFam3.chr31 C 0 C 0 e calJac3.chr21 21964826 0 + 50472720 C a score=1120708.000000 s hg38.chr21_KI270874v1_alt 119281 310 + 166743 AAGTCTAAATTAGGCTGC-TTTGCTAAATTTTAACTGATTAC-TCATTT-AATATCTGTATCTTTTCTTCCCCTAAGGTCCTTTT-AAAGTAC-TTAAGGACTATATTA---TTTCTAGTTTATTGACTTTTAAAACTCTAAACTAAATAGAGAGTATG---------------------------------ACATTTCTGTCAAATCTAAATCAATATCTTGCAT----ATAACACCAGTGTCTTAACCTATATGTGCAACATTTTGTTTTGTAGAGTAAAAATCTTTATGGCTTTAAAC-ATCAATTTTATTACTTTTAAGTCCACA-TTGCCTGGTAGGTGTCCTCTGATCATC s panTro4.chr21 3733213 310 + 32799110 AAGTCTAAATTAGGCTGC-TTTGCTAAATTTTAACTGATTAC-TCATTT-AATATCTGTATCTTTTCTTCCCCTAAGATCCTTTT-AAAGTAC-TTAAGGACTATATTA---TTTCTAGTTTTTTGACTTTTAAAACTCTAAACTAAATAGACAGTATG---------------------------------ACATTTCTGTCAAATCTAAATCAATATCTTGCAT----ATAACACCAGTGTCTTAACCTATATGTGCAACATTTTGTTTTGTAGAGTAAAAATCTTTATGGCTTTAAAC-ATCAATTTTATTACTTTTAAGTCCACA-TTGCCTGGTAGGTGTCCTCTGATCATC i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16996149 310 + 48394510 AAGTCTAAATTAGGGTGC-TTTGCTAAATTTTAACTGATTAC-TCATTT-AATATCTGTATCTTTTCTTCCCCTAAGATCATTTT-AAAGTAC-TTAAGGACTATATTA---TTTCTAGTTTATTGACTTTTAAAACTCTAAACTAAATAGACAGTATG---------------------------------ACATTTCTGTCAAATCTAAATCAATATCTTGCAC----GTAACACCAGTGTCTTAACCTATATGTGCAACATTTTGTTTTGTAGAGTAAAAATCTTTATGGCTTTAAAC-ATCAATTTTATTACTTTTAAGTCCACA-TTGCCTGGTAGGTGTCCTGTGATCATC i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4493190 315 + 32716333 AAGTCTAAATTGGGCTGCTTTTGCTAAATTTTAACTGATTACTTCATTTAAATATCTGTACCTTTTCTTCCCCTAAGATCCTTTTAAAAGTACTTTAAGGACTATATTA---TTTCTAGTTTATTGACTTTTAAAACTCTAAACTAAATAGACAGTATG---------------------------------ACATTTCTGTCAAATCTAAATCAATATCTTGCAT----GTAACACCAGTGTCTTAACCTATATGTGCAACATTTTGTTTTGTACAGTAAAAATCTTTATGGCTTTAAAC-ATCAATTTTATTACTTTTAAGTCCACA-TTGCCTGGTAGGTGTCCTTTGATCATC i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168608901 310 - 198365852 AAGTCTAAATTAGGCTGC-ATTGCTAAGTTTTAACTGATTAC-TCATTT-AATATCTGTATATTTTCTTTCCCTAAGATCCTTTT-AAAGTAC-TTAAGGACTACATTA---TTTCTAGTGTATTAAATTTTAAAAATCTAAACTAAATAGACAGTATG---------------------------------ACATTTCTGTCAAATCTAAATCAATATCTTGCAT----GTAACACCAGTGTCTTAACCTATACGTGCAACATTTTGTTTTATAGAGTAAAAACCTTTATGGCTTTAAAC-ATCAGTTTTATTACTTTTAAGTCCACA-TTGCCTGGTAGGTGTCTTCTGATCATC i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162272619 310 - 192294377 AAGTCTAAATTACGCTGC-ATTGCTAAATTTTAACTGATTAC-TCATTT-AATATCTGTATATTTTCTTTCCCTAAGATCCTTTT-AAAGTAC-TTAAGGACTACATTA---TTTCTAGTGTATTAAATTTTAAAAATCTAAACTAAATAGACAGTATG---------------------------------ACATTTCTGTCAAATCTAAATCAATATCTTGCAT----GTAACACCAGTGTCTTAACCTATACGTGCAACATTTTGTTTTATAGAGTAAAAACCTTTATGGCTTTAAAC-ATCAGTTTTATTACTTTTAAGTCCACA-TTGCCTGGTAGGTGTCTTCTGATCATC i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150968001 311 - 180432695 AAGTCTAAATTAGGCTGC-ATTGCTAAATTTTAACTGATTAC-TCATTT-aatatctgtatattttctttccctAAGATCCTTTT-AAAGTAC-TTACGGACTACATTA---TTTCTagtgtattaaattttaaaaatctaaactaaATAGACAGTATG---------------------------------ACATTTCTGTCAAATCTAAATCAATATCTTGCAT----GTAACACCAGTGTCTTAACCTATACGTgcaacattttgttttatagagTAAAAATCTTTATGGCTTTAAAC-ATcagttttattacttttaagTCCACATTTGCCTGGTAGGTGTCTTCTGATCATC i papAnu2.chr3 C 0 M 153 s chlSab2.chr2 15057612 310 - 90373283 AAGTCTAAATTAGGCTGC-ATTGCTAAATTTTAACTGATTAC-TCATTT-AATATCTGTATATTTTCTTTCCCTAAGATCCTTTT-AAAGTAC-TTAAGGACTACATTA---TTTCTAGTGTATTAAATTTTAAAAATCTAAATTAAATAGACAGTATG---------------------------------ACATTTCTGTCAAATCTAAATCAATATCTTGCAT----GTAACACCAGTGTCTTAACCTATACGTGCAACATTTTGTTTTATAAAGTAAAAATCTTTATGGCTTTAAAC-ATCAATTTTATTACTTTTAAGTCCACA-TTGCCTGGTAGGTGTCCTCTGATCATC i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21964826 307 + 50472720 AAGTCTAAATTAGGTTGT-ATTGCTAAATTTTAACTAATTAC-TCATTT-AATATCTGTATCTTTTCTTCCACTAAGATCCTTTT-AAAGTAC-TTAAGGACAATATTA---TTTCTAGTTTATTAACTTTTGAAAATCTAAACTAAAT----AGTATG---------------------------------ACATTTCTATCAAATCTAAATCAATGTCTGACAT----GTAACACCAGTGTCTTAACCTACACATGCAATATTTTGTTTTGTAGATTAAAAATCTTTATGGCTTTAAAC-ATCAGTTTTATTACTCTTAAGTCCACACCTGCCTGGTAGATGTCCTCTGATCATC i calJac3.chr21 C 0 C 0 s mm10.chr16 78149275 335 + 98207768 AAGGCCAAAGTGGACTGC-ATTACTGAATT----CTAATAAC-TCATTC-CATATCTGAACCTTTTC-----CTGAGAATCTTGG-AAACTAT---GAAGACAGTGTTATGGTTTCTGTTTGGTGAGCTTTGCAAAATCTAAACTGAGTAGGTAGCgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgCCCAATCAAAAGCAACCTCTGGCAC----ACAAGACTCCTGCCTCAA-CTACAAGCTCAAAATCTTCTTTTGATAAGCAAAATGGGTTGTCGGTTTAAACAAATAATTTTTTTAGTTTAACATCCACA-TTTTCTTTTTGATATGCTCTGGTTATC i mm10.chr16 C 0 C 0 s canFam3.chr31 13851156 302 + 39895921 AAATCCAAATTAGACACC-ATTGCTGAATTTTAATTTATTAC-TCACTT-AATATCTGAATCTTTTCTTCTCCAAAGATCCTTCC-AAAGTGC-TTAAGAACAATGTTACCATTCCTATTTTATGAGCTTCTAAATACTTAAATGAAAT----AGTATG---------------------------------ATATTTCTTTCAAAACTAAATTAATCTCCTGCATGGAAGTAAGACTAGTGTCATAACCCATAGTTTCAACGTTTTATGTTGTAAAGCAAAAATCTTTAGAGTTTTAAAC-ATACAATTTATTACTTATAAGTACACA-TTGCCCTGTAGGTGTT----------- i canFam3.chr31 C 0 C 0 a score=367731.000000 s hg38.chr21_KI270874v1_alt 119591 132 + 166743 ATCCTTCCAAGAATAACCCCATTTTTAGTTGCTATTTCCTATCTGCAATAAGAAGCTTTTGTGCATATTTTGAAAACTTTGCCTAAAATTAAAA---TGTACCC-AAATTGAA----------------------------------------------ACCAGTGTTTATAGTGTAAT-ACA s panTro4.chr21 3733523 132 + 32799110 ATCCTTCCAAGAATAACCCGCTTTTTAGTTGCTATTTCCTATCTGCAATAAGAAGCTTTTGTGCATATTTTGAAAACTTTGCCTAAAATTAAAA---TGTACCC-AAATTGAA----------------------------------------------ACCAGTGTTTATAGTGTAAT-ACA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16996459 132 + 48394510 ATCCTTCCAAGAATAATCCCATTTTTAGTTGCTATTTCCTATCTGCAATAAGAAGCTTTTGTGCATATTTTGAAAACTTTGCCTAAAATTAAAA---TGTACCC-AAATTGAA----------------------------------------------ACCAGTGTTTATAGTGAAAT-ACA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4493505 132 + 32716333 ATCCTTCCAAGAATAACCTCATTTTTAGTTGCTATTTCCTATCTGCAATAAGAAGCTTTTGTGCATATTTTGAAAACTTTGCCTAAAATTAAAA---TGTACCC-AAATTGAA----------------------------------------------ACCAGTGTTTATAGTGTAAT-ACA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168609211 132 - 198365852 ATCTTTCCAAGAATAACCCCATTTTTAGTTGCTATTTCCTATCTGCAACAAGAAGTTTTTGTGCATATTTTGAAAACTTTGCCTAAAATTAAAA---TGTACCC-AAATTGAA----------------------------------------------ACCAGTGTTTATAGTGTAAT-ACA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162272929 132 - 192294377 ATCTTTCCAAGAATAACCCCATTTTTAGTCGCTATTTCCTATCTGCAACAAGAAGTTTTTGTGCATATTTTGAAAACTTTGCCTAAAATTAAAA---TGTACCC-AAATTGAA----------------------------------------------ACCAGTGTTTATAGTGTAAT-ACA i macFas5.chr3 C 0 C 0 s chlSab2.chr2 15057922 132 - 90373283 ATCCTTCCAAGAATAACCCCATTTTTAGTTGCTATTTCCTATCTGCAACAAGAAGTTTTTGTGCATATTTTGAAAACTTTGCCTAAAATTAAAA---TGTACCC-AAATTGAA----------------------------------------------ACCAGTGTTTATAGTGTAAT-ACA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21965133 136 + 50472720 ATCCTTCCAAAAATAACCCCATTTTTAGTTGCTATTTCCTATCTACAATAAGAAATTTTTGTGCATATTTTGAAAACTTGGCCTAAAATTAAAATGTTGTACTCAAAATTGAA----------------------------------------------ACCAGTGTTTATACTGTAAT-ACA i calJac3.chr21 C 0 C 0 s mm10.chr16 78149610 134 + 98207768 -CTATTTTAAAAACTACCT-ACTGGGAGTGATTGTTTCATATCTGTAGCAATATAATTTGGTACACATTTTAAGGTCTTTGCGTAGAACAAGAATATTGCGTCCAAAATAGAA----------------------------------------------AGCAACTTTTATTTTAGAGT-GCA i mm10.chr16 C 0 I 5 s canFam3.chr31 13851458 176 + 39895921 ----TTTCAACAATAACCCCATTTTTAATGGCTGTTTGCTCTCTTCAATGATGGGCTTTGGTGAATACTTTGAGAAATTTGCATAAAA--AAATTATTGCTCAT-AAAGtaaataataaaataattttatagaattatttatGCAATAATAATGACTGCACTAGTTTTTATAATATGATAACA i canFam3.chr31 C 0 C 0 e papAnu2.chr3 150968312 153 - 180432695 M a score=5551026.000000 s hg38.chr21_KI270874v1_alt 119723 1496 + 166743 TATCTCTTTTTAGCATTACAATGAAAATGCTTTTTTACACATGCCTGAAATTTCAACAGCTACTACGGTATTTTCCCTATCTTCCTT-AAAAAAAATTATCATTCAAAATAATTCCAATTTATTTTGGGTATGAATAGAGATTTTCAATTT-AGAAAATGA--GTAATTTTATTGTTACGACTGTTATAGCC-------------CCATGAAAACTATATTTTGCCAATTTCTATTGGCCTGTGTCATTTTATCACATTTAAAATCTATAATCACACTAGCAAATATAATTTTGCCTGACTTTTTAGACAGTCTCTAAACTTAAAAGTTTTCCAACAGTATGACACACAACTTTAGGGGCACATGCAGCATATGCTTTTATTGCATGTAAGTCCTT-GGACTTTTATATTTATTTCATGTATTTTAAATATTTCTTGAAATCAAGAGCGTTAATATTATTAGTAACA----AACATCTG-TGGTCA-TTTTCTTCCATTTGTCACATAGCTAATACA---------------------------------------------GAGTATATAGTATTACTT-TTGAGTGGCCTTATGTAA-CATCTCCTTTCTAAATTCCTGAAAGTAA-GTTACGACCAGAATTACATACTAAAAAGAGTCAAAGAATACATTACCTACTTCTATAAATGGATAATTTTATAGTAATCTAAATAAAAATGAGACCAGAATAAATATTTTTCTAGCCTTCTCTGG-AATGCTAAGCAGTGTTGGGGAGGGAGTTAATAAGAAAGAGA-GTTAAAAGTAAACAGTGCTT----GTAGTTTAACAGTTGTCTCTTAGGGCACTGTTTTATGAAGATCTTTCAGAAAAGAAATTTTCTTCAGATTGCTTATGCTGTGTAAATATTACCTCAGATAAGGGCCACATTTTGGGTAAATAAGTCT------GCATAAACATAAGACTGCTTTATGTTG---------GTATCCTTAGTTTTTCTGTATTAATTCAAAATTCAAACCACAATTCCCCATAACACACTCTATAAAATGGTATTCATGACTTCATA-CAGCGAGGATGATGTTTTCCTTTATAAATGCCACATTAAATCT---GTATATTTTTAAATGGAAAAATTGTGAGAATACCAACATAACAACAGGTTGCCCTCCATCCTCTGTCCAATAAATTCTAACTTTACGTTTTTACTATCTGACAGAAATACTTTACAGTCTTGAG-GGGGGGAAAGA-----------CTGCCTTTTTTCTTGTACA-TTGTCTGTGTGACTTTCT--------GT------TGAGAATGTATTATGTATCAAGGACATTAAAATTTATATCTGCATAGGACAAGTTTAGAGAGTATATTTTCTCCAAAAATAATACTAGGAAAACTTAAAAGAGAATTTTA----CCACATAGAAAGAAAACATG-AAAATAAACTTTTGAAATATATGTGTAATTACCAAAAATATGCTGG----AAAC--AACTAATCTTCTGCTGG---AAAAAAAACAAATAACAATAAATTATATCTATTTTAAATTGAC-TCTGAATGTTATAGTCACGAACAAGAGTTTAGCAAACCTAGAAGGTTAAATCTTGA s panTro4.chr21 3733655 1499 + 32799110 TATCTCTTTTTAGCATTACAATGAAAATGCTTTTTTACATATGCCTGAAATTTCAACAGCTACTACAGTATTTTCCCTATCTTCCTT-AAAAAAAATTATCATTCAAAATAATTCCAATTTATTTTGGGTATGAATAGAGATTTTCAATTT-AGAAAATGA--GTAGTTTTATTGTTAAGACTCTTATAGCC-------------CCACGAAAACTACATTTTGCCAATTTCTATTGGCCTGTGTCATTTTATCACATTTAAAATCTATAATCACTCTAGCAAATATAATTTTGCCTGACTTTTTAGACAGTCTCTAAACTTAAAAGTTTTCCAACAGTATGACACACAACTTTAGGGGCACATGCAGCATATGCTTTTATTGCATGTAAGTCCTT-GGACTTTTATATTTATTTCATGTATTTTAAATATTTCTTGAAATCAAGAGTGTTAATATTATTAGTAACA----AACATCTG-TGGTCA-TTTTCTTCCATTTGTCACATAGCTAATACA---------------------------------------------GAGTGTATAGTATTACTT-TTGAGTGGCCTTATGTAA-CATCTCCTTTCTAAATTCCTGAAAGTAA-GTTACGACCAGAATTACATACTAAAAAGAGTCAAAGAATACATTACCTACTTCTATAAATGGATAATTTTATAGTAATCTAAATAAAAATGAGACCAGAATAAATATTTTTCTAGCCTTCTCTGG-AATGCTAAGCAGTGTTGGGGAGGGAGTTAATAAGAAAGAGA-GTTAAAAGTAAACAGTGCTT----GTAGTTTAACAGTTGTCTCTTAGGGCACTGTTTTATGAAGATCTTTCAGAAAAGAAATTTTCTTCAGATTGCTTATGCTGTGTAAATATTACCTCAGATAAGGGCCACATTTTGAGTAAATAAGTCT------GCATAAACATAAGACTGCTTTATGTTG---------GTATCCTTAGTTTTTCTGTATTAATTCAAAATTCAAACCACAATTCCCCATAACACACTCTATAAAATGGTATTCATGACTTCATA-CAGCGAGGATGATGTTTTCCTTTATAAATGCCACATTAAATCTGTAGTATATTTTTAAATGGAAAAATTGTGAGAATACCAACATAACCACAGATTGCCCTCCATCCTCTGTCCAATAAATTCTAACTTTACGTTTTTACTATCTGACAGAAATACTTTACAGTCTTGAGAGGGGGGAAAGA-----------CTGCCTTTTTTCTTGTACA-TTGTCTGTGTGACTTTCT--------GT------TGAGAATGTATTATGTATCAAGGACATTAAAATTTATATCTGCATAGGACAAGTTTAGAGAGTATATTTTCTCCAAAAATAATACTAGGAAAACTTAAAAGAGAATTTTA----CCACATAGAAAGAAAACATG-AAAATAAAA-TTTGAAATATATGTGTAATTACCAAAAATATGCTGG----AAAC--AACTAATCTTCTGCTGG---AAAAAAAACAAATAACAATAAATTATATCTATTTTAAATTGAC-TCTGAATGTTATAGTCACGAACAAGAGTTTAGCAAACCTAGAAGGTTAAATCTTGA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16996591 1499 + 48394510 TATCTCTTTTTAGCATTACAATGAAAATGCTTTTTTACATATGCCTGAAATTTCAAAAGCTACTACGGTATTTTCCCTATTTTCCTT-AAAAAAAATTATCATCCAAAGTAATTCCAATTT-TTTGGGGTATGAATAGAGATTTTCAATTTAAAAAAATGA--GTACTTTTATTGTTACCACTGTTATAGCC-------------CCATGAAAACTACATTTTGCCAATTTCTATTGGCCTGTGTTATTTTATCACATTTAAAATCTATAATCACTCTAGTAAATATAATTTTGCCTGACTTTTTAGACAGTCTCTAAACTTAAAAGTTTTCCAACAGTATGACACACAACTTTAGGGGCACAGGCAGCATATGCTTTTATTGC-TGTAAGTCCTT-GGACTTTTATATTTATTTCATGTATTTTAAATATTTCTTGAAATCAAGAGTGTTAATATCATTAGTAACA----AACCTCTG-TGGTCA-TTTTCTTCCATTTGTCACATAGCTATTACA---------------------------------------------GAGTGTATAGTATTATTT-TTGAGTGGCCTTATGTAA-CATCTCCTTTCTAAATTCCTGAAAGTAA-GTTATGACCAGAATTACA-ACTAAAAAGAGTCAAAGAATACATTACCTACTTCTATAAATGGATAATTTTATAGTAATCTAAATAAAAATGAGAGCAGAATAAATATTTTTCTAGCCTTCTCTGG-AATGCTAAGCAGTGCTGAGGAGTGAGTTAATAAGAAAGAGA-GTTAAAAGTAAACAGTGCTT----GTAGTTTAACAGTTGTCTCTTAGGGCACTGTTTTATGAAGATCTTTCAGAAAAGAAATATTCTTCAGATTGCTTATGCTGTGTAAATATTACCTCAGATAAGGGCCATATTTTGAGTAAATAAGTCT------GCATAAACATAAGACTGCTTTATGTTG---------GTATCCTTAGTTTTTCTGTATTAATTCAAAATTCAAACCACAATTCCCCATAACACACTCTATAAAATGGTATTCATGACTTCATA-CAGCGAGGATGATGTTTTCCTTTATAAATGCCACATAAAATCTGTAGTATATTTTTAAATGGAAAAATTGTGAGAATACCAACATAACCACAGATTGCCCTCCATCCTCTGTCCAATAAATTCTAACTTTACATTTTTACTATCTGACAGAAATACTTTACAGTCTTGAGAGGGGGGAAAGA-----------CTGCCTTTTTTCTTGTACATTTGTCTGTGTGACTTTCT--------GT------TGAGAATGTATTATGTACCAAGGACATTAAAATTTATATCTGCATAGGACAAGTTTAGAGAGTATATTTTCTCCAAAAATAATACTAGGAAAACTTAAAATAGAATTTTA----CCACATAGAAAGAAAACATG-AAAATAAAATTTTGAAATATATGTGTAATTACCAAAAATATGCTGG----AAAC--AACTAATCTTCTGCTGG---AAAAAAAACAAATAACAATAAATTATATCTATTTTAAATTGAC-TCAGACTGGTATAGTCATGAACAAGAGTTTAGCAAACCTAGAAGGTTAAATCTTGA i ponAbe2.chr21 C 0 M 405 s nomLeu3.chr25 4493637 1502 + 32716333 TATCTCTTTTTAGCATTACAGTGAAAATGCTTTTTTACATATGCCTGAAATTTCAACAGCTACTACGTTATTTTCCCTATCTTCCTT-AAAAAAAATTATCATTCAAAGTAATTCCAATTTATTTTGGGTATGAATAGAGATTTTCAATTT-AGAAAATGA--GTACTTTTATTGTTACCACTGTTACAGCC-------------CCATGAAAACTACATTTTGCCAATTTCTATTGGTCTGTGTCATTTTATCACATTTAAAATCTATAATCACTCTAGCAAATATAATTTTGTCTGACTTTTTAGGCAATCTCTAAACTTAAAAGTTTTCCAACAGTATGACACACAACTTTAGGGGCACATGCACCATATGCTTTTATTGCACGTAAGTCCTT-GGACTTTTATATTTATTTCATGTATTTTAAATATTTCTTGAAATCAAGAGTGTTAATATCATTAGTAACA----AACATCTG-TGGTCA-TTTTCTTCCATTTGTCACATAGCTAATACA---------------------------------------------GAGTGTATAGTATTATTT-TTGAGTGGCCTTAGGTAA-CATCTCCTTTCTAAATTCCTGAAAGTAATGTTACGACCAGAATTACATACTAAAAAGAGTCCAAGAATACATTACCTACTTCTATAAATGGATAATTTTATAGTAATCTAAATAAAGATGAGAGCAGAATAAATATTTTTCTAGCCTTCTCTGG-AATGCTAAGCAGTGTTGAGGAGTGAGTTAATAAGAAAGAGA-GTTAAAGGTAAACAGTGCTT----GTAGTTTAACAGTTGTCTCTTAGGGCACTGTTTTATGAAGATCTTTCAGAAAAGAAATTGTCTTCAGATTGCTTATGCTGTGTAAATATTACCTCAGATAAGGGCCATATTTTGAGTAAATAAGTCT------GCATAAACATAAGACTGCTTTATGTTG---------GTATCCTTAGTTTTTCTGTATTAATTCAAAATTCAAACCACAATTCCCCATAACACATTCTATAAAATGGTATTCATGACTTCATA-CAGCGAGGATGATGTTTTCCTTTATAAATGCCACATAAAATCTGTAGTATATTTTTAAATGGAAAAATTGTGAGAATACCAACATAACCACAGATTGCCCTCCATCCTCTGTCCAATAAATTCTAACTTTATGTTTTTACTATCTGACAGAAATACTTTACAGTCTTGAGACGGGGGGAAGA-----------CTGCCTTTTTTCTTGTACATTTGTCTGTGTGACTTTCT--------GT------TGAGAATGTATTATGTATCAAGGACATTAAAATTTATATCTGCATAGGACAAGTTTAGAGAGTATATTTTCTCCAAAAATAATACTAGGAAAACTTAAAAGAGAATTTGA----CCACATAGAAAGAAAACACG-AAAATAAAATTTTGAAATATATGTGTAATTACCAAAAATATGCTGG----AAAC--AACTAATCGTCTGCTGG---AAAAAAAACAAATAACAATAAATTATATCTATTTTAAATTGAC-TCTGAATGTTATAGTCATGAACAAGAGTTTAGCAAACCTAGAAGGTTAAATCTTAG i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168609343 1498 - 198365852 TATCTCTTTTTAGCATTACAATGAAAATGCTCTTTTACATTTGCCTGAAATTTCAACAGCTACTACAGTATTTTCCCTATCTTCCTTAAAAAAAAATTATCATTCAAAGTAATTCCAATTTATTTTGGGTGTGAATAGAGATTTTCAATTT-AGAAAATGA--GTACTTTCATTGTTACCACTGTTACAGCC-------------CCATGAAAACTACGTTTTGCCAATTTCTATTGGCCTGTGTCATTTTGCCACATTTAAAATCTATAATCACCCTAGCAAATATAATTTTGCCTGACTTTTTAGAGAGTCTCTAAACTTAAAAATTTTCCAACAGTATGACACACAACTTTAGGGGCACATGCATCATCTGCTTTTATTGCATGTAAGTCCTG-GGACTTTTATATTTATTTCATGTACTTTAAACATTTCTTGAAATCAAGA--GTTAATATCATTAGTAACA----AACATCTG-TCATTA-TTTTCTTCCATTTGTCACATAGCTAATAC-----------------------------------------------AGTGTATAGTATTATTT-TTGAGTGACCTTATGTAA-CATCTCCTTTCTAAATTCCTGCAAGTAA-GTTACGACCAGAATTACATACTAAAAAGAGTCAAAGAATACATTACCTACTTCTATAAATGGATACTTTTATAGTAACCTAAATAAAAATGAGAGCAGAATAAATATTTTTCTAGCCTTCTCTGG-AATGCTAAGCAGTGTTGAGGAGTGAGTTAATAAGAAAGAGA-GTTAAAAGTAAACAGTGCTT-----CAGTTTAACCGTTGTCTCTTAGGGCACTGTTTTATGAAGATCTTTCAGAAAATAAATTTTCTTCAGATTCCTTATGCTGTGCAAATATTCCCTCAGATAAGGGCCATATTTTGAGTCAATAAGTCT------GCATAAACATCAGGCTGCTTTATGTTG---------GTATCCTTAGTTTTTCTGTATTAATTCAAACTTCAAACCACAATTCCCCATAACACACTCTATCAAATGGTATTCATGACTTCATA-TAGCAAGGATGATGTTTTCCTTTATACATGCCACATAAAATCTGGGGTATATCTTTAAATGGAAAAATTGTGAGAACACCAACATAACCACAGATTGCCCTCCATCCTCTGTCCAATAAATTCTAACTTTGCGTTTTTACTGTCTGACAGAAATACTTTACAGTCTTGAGAGGGGCGAAAGA-----------CTGCCTTTTTTCTTGTACATTTGTCTGTGGGACTTTCT--------GT------GGAGAATGTATTATGTATCAAGGACATTAAAATTTATATCTGCATAGGACGACTTTAGGGAGTATATTTTCTCCAAAAATAATACTAGGAAAACTTAAAAGAGAATTTTA----CCACATAGAAAGAAAACATG-AAAACAGAATTTTGAAATATATGTGTCATTACCAAACATATGCTGG----AAAC--AACTAATCATCTGCTGG-AAAAAAAAAACAAATAACAGTAAATTATATCTATTTTAAATTGAC-TCTGAATGTTATAGT-ATGAACAGGAGTTTAGCAAACCTAAAAGGTTGAAGCTTGA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162273061 1501 - 192294377 TATCTCTTTTTAGCATTACAATGAAAATGCTCTTTTACATTTGCCTGAAATTTCAACAGCTACTACAGTATTTTCCCTATCTTCCTTAAAAAAAAATTATCATTCAAAGTAATTCCAATTTATTTTGGGTGTGAATAGAGATTTTCAATTT-AGAAAATGA--GTACTTTCATTGTTACCACTGTTACAGCC-------------CCATGAAAACTACGTTTTGCCAATTTCTATTGGCCTGTGTCATTTTGCCACATTTAAAATCTATAATCACCCTAGCAAATATAATTTTGCCTGACTTTTTAGAGAGTCTCTAAACTTAAAAATTTTCCAACAGTATGACACACAACTTTAGGGGCACATGCATCATCTGCTTTTATTGCATGTAAGTCCTG-GGACTTTTATATTTATTTCATGTACTTTAAACATTTCTTGAAATCAAGAGTGTTAATATCATTAGTAACA----AACATCTG-TCATTA-TTTTCTTCCATTTGTCACATAGCTAATAC-----------------------------------------------AGTGTATAGTATTATTT-TTGAGTGACCTTATGTAA-CATCTCCTTTCTAAATTCCTGCAAGTAA-GTTAGGACCAGAATTACATACTAAAAAGAGTCAAAGAATACATTACCTACTTCTATAAATGGATACTTTTATAGTAACCTAAATAAAAATGAGAGCAGAATAAATATTTTTCTAGCCTTCTCTGG-AATGCTAAGCAGTGTTGAGGAGTGAGTTAATAAGAAAGAGA-GTTAAAAGTAAACAGTGCTT-----CAGTTTAACCGTTGTCTCTTAGGGCACTGTTTTATGAAGATCTTTCAGAAAATAAATTTTCTTCAGATTCCTTATGCTGCGCAAATATTCCCTCAGATAAGGGCCATATTTTGAGTCAATAAGTCT------GCATAAACATCAGGCTGCTTTATGTTG---------GTATCCTTAGTTTTTCTGTATTAATTCAAACTTCAAACCACAATTCCCCATAACACACTCTATCAAATGGTATTCATGACTTCATA-CAGCAAGGATGATGTTTTCCTTTATACATGCCACATAAAATCTGGGGTATATCTTTAAATGGAAAAATTGTGAGAACACCAACATAACCACAGATTGCCCTCCATCCTCTGTCCAATAAATTCTAACTTTGCGTTTTTACTATCTGACAGAAATACTTTACAGTCTTGAGAGGGGCGAAAGA-----------CTGCCTTTTTTCTTGTACATTTGTCTGTGGGACTTTCT--------GT------GGAGAATGTATTATGTATCAAGGACATTAAAATTTATATTTGCATAGGACGACTTTAGGGAGTATATTTTCTCCAAAAATAATACTAGGAAAACTTAAAAGAGAATTTTA----CCACATAGAAAGAAAACATG-AAAACAGAATTTTGAAATATATGTGTCATTACCAAACATATGCTGG----AAAC--AACTAATCATCTGCTGGAAAAAAAAAAACAAATAACAGTAAATTATATCTATTTTAAATTGAC-TCTGAATGTTATAGT-ATGAACAGGAGTTTAGCAAACCTAAAAGGTTGAAGCTTGA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150968465 1499 - 180432695 tATCTCTTTTTAGCATTACAATGAAAATGCTCTTTTACATTTGCCTGAAATTTCAACAGCTACTACAGTATTTTCCCtatcttcctt-aaaaaaaattatcattcaaAGTAATTCCAATTTATTTTGGGTGTGAATAGAGATTTTCAATTT-AGAAAATGA--GTACTTTCATTGTTACCACTGTTACAGCC-------------CCATGAAAACTACGTTTTGCCAATTTCTATTGGCCTGTGTCATTTTGCCACATTTAAAATCTATAATCACCCTAGCAAATATAATTTTGCCTGACTTTTTAGAGAGTCTCTAAACTTAAAAATTTTCCAACAGTATGACACACAACTTTAGGGGCACATGCATCATCTGCTTTTATTGCATGTAAGTCCTG-ggacttttatatttatttcatgtactttaaacatttcttgaaatcAAGAGTGTTAATATCATTAGTAACA----AACATCTg-tcatta-ttttcttccatttgtcacATAGCTAATAC-----------------------------------------------AGTGTATAGTATTATTT-TTGAGTGGCCTTATGTAA-CATCTCCTTTCTAAATTCCTGCAAGTAA-GTTACGACCAGAATTACATACTAAAAAGAGTCAAAGAATACATTACCTACTTCTATAAATGGATAATTTTATAGTAacctaaataaaaatgagagcagaataaatatttttctagccTTCTCTGG-AATGCTAAGCAGTGTTGAGGAGTGAGTTAATAAGAAAGAGA-GTTAAAAGTAAACAGTGCTT-----CAGTTTAACCGTTGTCTCTTAGGGCACTGTTTTATGAagatctttcagaaaataaattttcttcagATTCCTTATGCTGCGCAAATATTCCCTCAGATAAGGGCCATATTTTGAGTCAATAAGTCT------GCATAAACATCAGGCTGCTTTATGTTG---------GTATCCTTAGTTTTTCTGTATTAATTCAAACTTCAAACCACAATTCCCCATAACACACTCTATCAAATGGTATTCATGACTTCATA-CAGCAAGGATGATGTTTTCCTTTATACATGCCACATAAAATCTGGGGTATAtctttaaatggaaaaattgtGAGAACACCAACATAACCACAGATTGCCCTCCATCCTCTGTCCAATAAATTCTAACTTTGCGTTTTTACTATCTGACAGAAATACTTTACAGTCTTGAGAGGGGCAAAAGA-----------CTGccatttttcttgtacatttgtctGTGGGACTTTCT--------GT------GGAGAATGTATTATGTATCAAGGACATTAAAATTTATATCTGCATAGGACGACTTTAGGGAGtatattttctccaaaaataatacTAGGAAAacttaaaagagaatttta----ccacatagaaagaaaacatg-aaaacagaattttgaaatatatgtgtcATTACCAAACATATGCTGG----AAAC--AACTAATCATCtgctgg--gaaaaaaaacaaataacaataaattatatctattttaaattgAC-TCTGAATATTATAGTCATGAACAGGAGTTTAGCAAACCTAAAAGGTTGAAGCTTGa i papAnu2.chr3 M 153 C 0 s chlSab2.chr2 15058054 1504 - 90373283 TATCTCTTTTTAGCATTACAAAGAAAATGCTCTTTTACATTTGCCTGAAATTTCAACAGCTACTACAGTATTTTCCCTATCTTCCTT-AAAAAAAAAAATCATTCAAAGTAATTCCAATTTATTTTGGGTATGAATAGAGATTTTCAATTT-AGAAAATGA--GTACTTTTATTGTTACCACTGTTACAGCC-------------CCATGAAAACTACGTTTTGCCAATTTCTATTGGCCTGTGTCATTTTGCC-CATTTAAAATCTATAATCACCCTAGCAAATATAATTTTGCCTGACTTTTTAGAGAGTCTCTAAACTTAAAATTTTTCCAACAGTATGACACACAACTTTAGGGGCACATGCATCATCTGCTTTTATTGCATGTAAGTCCTT-GGACTTTTATATTTATTTCATGTATTTTAAATATTTCTTGAAATCAAGACTGTTAATATCATTAGTAACA----AACATCTG-TCATTA-TTTTCTTCCATTTGTCACATAGCTAATAC-----------------------------------------------AGTGTATAGTATTATTT-TTGAGTGGCCTTATGTAA-CATCTCCTTTCTAAATTCCTGCAAGTAA-GTTACGACCAGAATTACATACTAAAAAGAGTCAAAGAATACATTACCTACTTCTATAAATGGATAATTTTATAGTAACCTAAATAAAAATGAGAGCAGAATAAATATTTTTCTAGCCTTCTCTGG-AATGCTAAGCAGTGTTGAGGAGTGAGTTAATAAGAAAGAGA-GTTAAAAGTAAACAGTGTTT-----CAGTTTAACCGTTGTCTCTTAGGGCACTGTTTTATGAAGATCTTTCAGAAAATAAATTTTCTTCAGATTCCTTATGCTGTGCAAATATTCCCTCAGATAAGGGCCATATTTTGAGTCAATAAGTCTGCATAAGCATAAGCATCAGACTGCTTTATGTTG---------GTATCCTTAGTTTTTCTGTATTAATTCAAACTTCAAACCACAATTCCCCATAACACACTCTATCAAATGGCATTCATGACTTCATA-CAGCAAGGATGATGTTTTCCTTTATAAATGCCACATAAAATCTGGGGTATATTTTTAAATGGAAAAATTGTGAGAACACCAACATAACCACAGATTGCCCTCCATCCTCTGTCCAATAAATTCTAACTTTGCGTTTTTACTATCTGACAGAAATACTTTACAGTCTTCAGAGGGGGGAAAGA-----------CTGCCTTTTTTCTGGTACATTTGTCTGTGTGACTTTCT--------GT------GGAGAATGTATTATGTATCAAGGACATTAAAATTTATATCTGCATAGGACAAGTTTAGGGAGTATATTTTCTCCAAAAATAATACTAGGAAAACTTAAAAGAGAATTTTA----CCACATAGGAAGAAAACATG-AAAACAAAATTTTGAAATATATATGTAATTACCAAAAATATGCTGG----AAAC--AACTAATCATCTGCTGG--GGAAAAAAACAAATAACAGTAAATTATATCTATTTTAAATTGAC-TCTGAATGTTATAGTCATGAACAGGAGTTTAGCAAACCTAGAAGGTAGAAGCTTGA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21965269 1479 + 50472720 CATCTCTTCTGAGCACTACAATGAAAATGCTGTTTTATACATGCCTGAAATTTCCACAGCTTCTATAATATTTTCTCTATTTTTCTA-AAAAAGAAAT---ACTCAAAGTAATTTCTATTTATTTTGGGTATTAATAGAGATTTTCAATTT-AGAAAATAA--CTACTTTTATTGTTACAACTGTTACAGCC-------------CCATGAAAACTACATTTTGCCAATTTCTGTTAGCCTGTGTCATTTTACCATTTTCAAAATCTATAATCACTCTAGCGAATATAATTTTGCCTGACTTTTCAGACAGCCTCTGAACTT-AAAGTTTTCCA--------ACATACAACTTTAGGGGCACATGTTGCATATGATTTTATTGCATGTAAGTCCTT-AGACTTTTATATTTATTTCATGTAA-TTAAATATTTCTCGAAATCAAGAGTGTTAATATCATCAGTAACAAACGAACACCTG-TGGTCA-TTTTCTTCCATTTGTCACACAGCCAATATA---------------------------------------------GAGTGTATAGTATTATTT-TTGAGTGGCCTCATGTAA-CATCTCCTTT--------------GTAA-GTTATGATCAGAATTACATACCAAAAAGAGTCAAAGAATACATTACCTACTACTATAAATTGATAATTTTATGGTAATCTAAATTAAAATGAGAGCAGAATAAATATTTTTCTGGCCTTCTCTGG-AATGCTTAGCAGTGCTGAGCAGTGGGTTAATAAGAAAGAGA-GTTAAAAGTAAACAGTGCTT----GCCGTTTAATAGTTGTCTCCTAGGGCACTGTTTTATGAAGATCTTTCAGAAAAGAAATTTTCTTCAGATTGTTTATGCTGTGTAAATATTGCCTCAGATAAATGCCATATTTTGACTAAATAAGTCT------GCATAAACATAAGACTGTTTTATGTTG---------GTATCCTTAGTTTTTCTGTATTAATTCAGAATTCAAACCACAATTCCCCATAACACGCTCTATAAAACAGTATTTATGACTTCATA-CAGGGGGGATGATATTTTCCTTTATAAATGCCACACAAAACCTGTGGtatatttttaaataaaaaaataGTGAGAATACCAGCATAACCACAGATTGCCCTCCATCCTCTGTCCAATATATCCTAACTTTAGGTTTTTACTATCTGACAGAAACCCTTTACAGTCTTAAGATGAGGGAAAAT-----------CAGCCTTTTTTCTTGTACATTTGTCTCTGTGACTTTCT--------AC------TAAGAATGTATTATGTATCAAGGACATTAAAATTTATATCTGCATAGGACAAGTTTAGGGAGTATATTTTCTCCAAAAATAATACTAGGAAAACTTAAAAGAGAATTTTA----CCACATAGAAAGAAAACATA-AAAAGACAATTTGGAAATATATGTGTAATTACCAAAAACATGCTGG----AAAC--AACTAATCTTCTGCCAA--AAAAAAAAACAAATAACCATAAATTATATCTATTATAAGTTGAT-TCTGAATGTGATAGTCATTAATAAGAGTTTAGCAAACCTAGAAGGTTAAAGCTTGA i calJac3.chr21 C 0 C 0 s mm10.chr16 78149749 1476 + 98207768 TTTTTTTTTTGAGGATTATGATGGAAGTGCTGTGTTACACGTGCCTGAAATTCCCACAACTAA---------TTCTCTACTCTCTGT-TAGAAAA-------------------------------------------------TTGGTTT-AGAAACTGC--ATG----TATTATTATAACTATTATTGCCACTGTTGGGGTAACCGTGAAAGCTTCATTTTG-CAGTTCCTTCTGACCAACGTTGCTTGCTCATTTTTAAAATCTGTAATCACTCTAGAAAATATAATTTTATGCCACTTTTTAGACAGCTTCCAAATGTTACA-TTTGCAAACCACCCGCCTCAGAACTTCAGTGGTGTACACATGA---GTTCTTGCTGCACTTAAGCCCTT-GAGTTTCTAGATTTATTTCGTGTATTTAAAATCTTTCCTTAACTCAGGAGTCCAGAGATCATTAATAACA----AACGTCTGCTGGCTA-TTTTCTTCCATTTGTCACAAAGATTATATATATATAtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtATAATTAGTTGTTTAGCAGCACTACATAAGTATCTCCTTTCCAAGGTCCTGGAAGAAA----ATGACCAGACCTACACA--GAGAAGAATTAAGAAACACAACGCATACTTCTGTGAATGGGTTG-TTTATGACAATTTAAATGAAGATGAGAGGCAAATGGATG-CCCTCTAGCATCCCCTAGTAATGCTAAGTGATGCTGAGGAGTAGACTAGGTACCAAGAAACTTTAAAGGCAAGAAGTGTTTCTGCACAGACTGACAGTTGCCTCTCATGACACTATGTTATAAAAATCCTATGGAAAAG---TTTCCTTC----TGTTTGTGCTGTGTAAATATTACCTCAGAAAAATGCCATAATTCAGCTAAATAAGTCT------GCATAAACATAGCAGTGTTTTATGTTG---------GTGTGCTCAGTTTTGCTGCGTTAATTCAAAACTCAAACCACGATTCACT-CAACACACTTTATAAAGTACTATTCATAACTTCATGCCATGAAGGATGATATTTTCCTTCATAAATGCCATATAAAATCTGTGGTAAAATTTTAAATAGAAAAATTGTGAAAACCCCAACATAACCACAAATTGCCCTCCATCTCTCGCCCAATAAATTCTACCTTCAAGTTTTTACTCTGTGACAGAAATCCTTTATGGTCTTAAAAG----CAAAGG-----------TAGCCTCCTT--GTCTACAGTTGACTGTGGGACTTTCT--------GTATTCCAGGTGAAT--------TGACAACAGTGCTATAATTTTTATCCACATAGGGAAAGTTGATGGGG-GTATTTTCATCCGAAATCCTACCTAGAAAACCTAAAAGAAAATTGTAAGATTCAGAGTGGAAACAAACAAG-CAAATATAGTGCACGCATACACACATATTTACCAAAAAAAATGTGATTCTAAAA--AATTAA---TCTGCTAAACAAAACAAGATAACAAACAGTACAT-----------TAAATTGACTTTTAAATGTAACACTCATCAATTACAGAGTATCAGTACTGGAAACTTGAAGCTTGG i mm10.chr16 I 5 C 0 s canFam3.chr31 13851634 1439 + 39895921 GATTCTTTCTGAGTGTCAGA---AAAATGCTGTGTTACA--TGCTTGCAACTTCCAC--TTATC----TATTTCCATTACCTTCCTT-TAAAACGACA----------------------------------------------TTAATTT-ACAAAATACATGTATTTTTATGATTACTACTGCTGGATCA-------------CCAGAAAACCTGCATTTTGCCGATTTCTATTGGCCTGTGTCATTTTATCATTTTAAAAATCTATAACCACCCTAGCAAATATAATTTCACCTGACTTTTCATACTGCCTCTGAACTTTAAAGTTTTCAGACAGTGTGACACATAACTTTAGTGAGGCATACAGCATATGCTTTTATTGCATTTAAGCCTTCAGAATTTTTACATTTATTTCATGTATTTAAACTCTTTCACTAAAT--AGAGACCTAAAGTCATTCAGAACA----AACATTC--TGGCCATTTTTCTTCCATCT-----ATAACCAATAAA---------------------------------------------GAGTATATAATATCACTTATTTAGTGGCCTTATTTAA-AATCAACTTTCTAAGTTCCTGAAA-----GTTATGACCAGAATTACACACTAAAAAGAGTTTAAAAATGAATTGCTCACTTCTATAAATATACTG-TTTATAATAATCTAAATGAAAAT-AAAGCAAAATA-----TTTTCTGACCTTTTCTGG-AGTA-TAAGCAGTGTTAAGGAGTGAGTTAAGAAGAAA-----GTTCAAAGTAAACAGCACTTATACGTGGTTTAATAGTTGTCTCTTAGGACACTACTTTATGATGATTCTACGGAAAATAAATTTTCTTCTGACTGCTTGCACTGGGTAAATATTACCTCAGATAAATACCATATTTTGCCTAAATAAGTCT------GTATAAACATAAGACTGTTTTATGTTGGTTTCCTTAGTTTCCTTAGTTTTTCTGCATTAATTCAAAATTCAAACCACGATTCCCCCTAAAACACTCTATAAAACAGTATTCATGACTTCATA-CAGTGAGTATGATATTTTCCTTTATAAATGCCACGTAAAATCTGTGGTAAATTCTTAAATAGAAAAATTGTGAAAATCCCAACATAACCACAGATTGCCCTCCATCCCCTGTCCAATAAATTCTAACTTTAGGTTTTTACTATCTGACAGAAATCCTTTACAGTCTTGAGaaaaaaaaaaaaaaaaaaaaaaGCAGCCTTTTGTTTCTTATG--TGTTTGTGTGACTTTCTCTTTCCCAGT------TGAGAGTGAATTGAGGATAAA---CATTATAAGTCATATCTACATAGGGAAAATTTGAAGAGTATATTTTCTTCAGAAGTAATACTCAGAAAACTTAAAAGGGAATTTTA----TCATTTGGGAAGAAAAGAAACAAAAAATATTTTTTAAGTATACATGCAGTTGCCAAAAATATACTAG----AACCTAAAACAATCTTCTACTAA---AAA----------------AAATGAGATCTATTTTAAATTGAC-TTTGAATAATATAGTCATAAAGGAGAGTTTACTAAACCTACCAGGTTAAAGCTTGA i canFam3.chr31 C 0 C 0 a score=597306.000000 s hg38.chr21_KI270874v1_alt 121219 219 + 166743 TTTATATATG-TTTTTATGTTAAAATAT---------GTTTT----TCAATTACCAAAATTAGTAACTGTTACCAAAATAT------AGGAATTCATTTACAT-AGCTATAAAAATATTACATT----TAACTTAATATTGAAGTATTAAAAACAGTAGATAATCATGCTC-AGACTTATTAAGAGGAAGAAAACCCTTTGTTGCC----ATTACATAGTTGACAACAAAATATCAGTGGAAGATTTTC s panTro4.chr21 3735154 219 + 32799110 TTTATATATG-TTTTTATGTTAAAATAT---------GTTTT----TCAATTACCAAAATTAGTAACTGTTACCAAAATAT------AGGAATTCATTTACAT-AGCTATAAAAATATTACATT----TAACTTAATATTGAAGTATTAAAAGCAGTAGATAATCATGCTC-AGACTTATTAAGAGGAAGAAAACCCTTTGTTGCC----ATTACATAGTTGACAACAAAATATCAGTGGAAGATTTTC i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4495139 218 + 32716333 TTTATATATGTTTTTTATGTTAAAATAT---------GCTTT----TCAATTACCAAAATTAGTAACTGTTACC-AAATAT------AGGAATTCATTTAAAT-AGCCATAAAAATATTACATT----TAACTTAATATTGCAGTACTAAAAACAGTAGATAATCATGCTC-AGATTTATTAAGAAGAGGAAAACACTC--TTGCC---TATTACATAGTTGACAACAAAATATCAGTGGAAGATTTTC i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168610841 224 - 198365852 GTTATATATG-TTTTTATGTTAAAATAT---------GTTTTTCAGTCAATTACCAAAATTAGTAACTGTTACCAAAATAT------AGGAATCCATTTAAAT-AGCTATAAAAATATTACATT----TAACTTAATATTGAAGTATTAAAAACAATAGATAATCGTGCTC-AGACTTATTAAGAAGTGGAAAACCCTTTGTTGCC---TATTACGTAGCTGACAACAAAATATCAGTGGAAAATTTTC i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162274562 224 - 192294377 CTTATATATG-TTTTTATGTTAAAATAT---------GTTTTTCAGTCAATTACCAAAATTAGTAACTGTTACCAAAATAT------AGGAATCCATTTAAAT-AGCTATAAAAATATTACATT----TAACTTAATATTGAAGTATTAAAAACAATAGATAATCGTGCTC-AGACTTATTAAGAAGTGGAAAACCCTTTGTTGCC---TATTACGTAGCTGACAACAAAATATCAGTGGAAAATTTTC i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150969964 224 - 180432695 cttatatatg-tttttatgttaaaatat---------gtttttcagtcAATTACCAAAATTAGTAACTGTTACCAAAATAT------TGGAATCCATTTaaat-agctataaaaatattacatt----taactTAATATTGAAGTATTAAAAACAATAGATAATCATGCTC-AGACTTATTAAGAAGTGGAAAACCCTTTGTTGCC---TATTACATAGCTGACAACAAAATATCAGtggaaaattttc i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15059558 224 - 90373283 CTTATATATG-TTTTTATGTTAAAATAT---------GTTTTTCAGTCAATTACCAAAATTAGTAACTGTTACCAAAATAC------AGGAATCCATTTAAAT-AGCTATAAAAATATTACATT----TAACTTAATATTGAAGTATTAAAAACAATAGATAATTGTGCTC-AGACTTATTAAGAAGCGGAAAACCCTTTGTTGCC---TATTACGTAGCTGACAACAAAATATCAGTGGAAAATTTTC i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21966748 222 + 50472720 ATTATATATG-TTTTTATGTTAAAATAT---------GTTTCTCAGTCAATTACCAAAATTAGTAATTGTTATCAAAATGT------AGGAATTCATTTAAAT-AGTTATAAAAATATTACATT----TAAC--AATATTGAAGTATTTAAAACAGTAGATATTCATGCTC-AGACTTATTGAGAAGAGGAAAAGCCTTTGTTGCC---TATTACGTAGTTTACAACAAAATAACAGTGGAAATTTTTC i calJac3.chr21 C 0 C 0 s mm10.chr16 78151225 231 + 98207768 GCTACATCTG-TGTTAATACTTGAATGCAAATTGAGAGTTTT--AGTCATTTATGAAAATT----ATCCTTGCCAAAGGGTAAAATCAAAAATCTAACT---T-AGCCATTAAAATGTTATATCATTGTTGCTTCATATCAAGATATTAGAAA-AATGTGTATTTATGCTCAAGACTTACTAAAAGGAGAAAA---CTATGTTGCTTTATATTATATTCTTGAC--TAAAGTTTCACTGGAAAGTTTT- i mm10.chr16 C 0 C 0 s canFam3.chr31 13853073 230 + 39895921 CTTATGTATG-TTTTTATGTTAGAATGTAAGTTTAAGTTTTTTCAGTCAATTACTAATATTAGCAGTTACTACC-AAATGT------GGAAATTTATTTAAATGAGCTATAAAAATCTCCCATT----TAATTTCATATGAAAGT-CTAGAAATAGCAAATAGTCATGCTTGGGACTTTTTAATAAAAAGAAAACCCT--GTTGTCATATATTACATACTTGACAACA---TATCA-TGGAAAATTTTC i canFam3.chr31 C 0 C 0 e ponAbe2.chr21 16998090 405 + 48394510 M a score=384048.000000 s hg38.chr21_KI270874v1_alt 121438 123 + 166743 TTCTTAAATAAAGCTAAGGAGA-GC-AAATAGCTAATATTGCAACTCTTATCTAGTCTCAGGTTATATT-GGT----AGTAGCTCCTTAAGCTGACTGACTTATACTCTGAAATACATTTATTTAAAAAG s panTro4.chr21 3735373 123 + 32799110 TTCTTAAATAAAGCTAAGGAGA-GC-AAATAGCTAATATTGCAACTCTTATCTAGTCTCAGGTTATATT-GGT----AGTAGCTCCTTAAGCTGACTGACTTATACTCTGAAATACATTTATTTAAAAGG i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16998502 124 + 48394510 TTCTTAAATAAAGCTTAGGAGA-GCAAAATAGCTAATATTGCAACTGTTATCTAGTCTCAGGTTATAAG-GAT----AGTAGCTCCTTAAGCTGACTGACTTATACTCTGAAATACATTTATTTAAAAGG i ponAbe2.chr21 M 405 C 0 s nomLeu3.chr25 4495357 123 + 32716333 TTCTTAAATAAAGCTCAGGAGA-GC-AAATAGCTAATATTGCAACTGTTATCTAGTTTCAGGTTATATT-GAT----AGTAGCTCCTTAAGCTGACTGACTGATACTCTGAAATACATTTATTTAAAAGG i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168611065 127 - 198365852 TTCTTAAATAAAACTAAGGAGG-GC-AAATAGCTAATGTCGCAACTGTTATCTAGTCTCAGGTTATATT-GGTAGTAAGTAGCTCCTTAAGCTGACTGAGTTAGACTCCGAAATACATTTATTTAAAAGG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162274786 123 - 192294377 TTCTTAAATAAAACTAAGGAGG-GC-AAATAGCTAATATCGCAACTGTTATCTAGTCTCAGGTTATATT-GGT----AGTAGCTCCTTAAGCTGACTGAGTTAGACTCCGAAATACATTTATTTAAAAGG i macFas5.chr3 C 0 I 309 s papAnu2.chr3 150970188 123 - 180432695 ttcttaaataaagCTAAGGAGG-GC-AAATAGCTAATATCGCAACTGTTATCTAGTCTCAGGTTATAAT-GGT----AGTAGCTCCTTAAGCTGACTGAGTTAAACTccgaaatacatttatttaaaagg i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15059782 123 - 90373283 TTCTTAAATAAACCTAAGGAGG-GC-AAATAGCTAATATCGCAACGGTTATCTAGTCTCAGGTTATATT-GGT----AGTAGCTCCTTAAGCTGACTGAGTTAGACTCCGAAATACATTTATTTAAAAGG i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21966970 122 + 50472720 TTCTTAAAAAAAGCTAAGGAGA-GC-AAATAGCTACTATTGAAACTGTTATCCA-TCTCAGTTTATATT-GGT----GTTAGGTCCTTGAGCTGACTGATTTATACTCTGAAATACATTTATTTCAAGAA i calJac3.chr21 C 0 C 0 s mm10.chr16 78151456 105 + 98207768 ----TAAA--------AGGAGGCAC-AGACAGTTAAGATTAAAA---TTATCTGTTGCAAGTTTGTATTGGGT----GAGAGCTCCT-----TGGTTGGCTTGAATGTATAGCTATATTCATTTTAAAAG i mm10.chr16 C 0 C 0 s canFam3.chr31 13853303 112 + 39895921 TGCCTAGAAAA---TACAGGAA-AC-AAATAGCTAATATTG----TGTTGTCTATTCTAAGTAAATTCA-GGC----AATTGCTCTTTTGACTAAATGACTTA----CTGAAATACATTCAGCTGAGAGG i canFam3.chr31 C 0 C 0 a score=11524.000000 s hg38.chr21_KI270874v1_alt 121561 3 + 166743 GAC s panTro4.chr21 3735496 3 + 32799110 GAC i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16998626 3 + 48394510 GAC i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4495480 3 + 32716333 GAC i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168611192 3 - 198365852 GAT i rheMac3.chr3 C 0 I 350 s macFas5.chr3 162275218 3 - 192294377 GAT i macFas5.chr3 I 309 C 0 s papAnu2.chr3 150970311 3 - 180432695 gaC i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15059905 3 - 90373283 GAT i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21967092 3 + 50472720 GAC i calJac3.chr21 C 0 C 0 s mm10.chr16 78151561 3 + 98207768 AAC i mm10.chr16 C 0 C 0 s canFam3.chr31 13853415 3 + 39895921 GAC i canFam3.chr31 C 0 C 0 a score=3509942.000000 s hg38.chr21_KI270874v1_alt 121564 983 + 166743 TGGGCCCTCTGTTGAATATACAATTCAATTTTAGTTTCGACTTCATTAGCTGAGGTAAATTATCACATTGGCATCCCA-TAATATCATTTCACTTTACTTAGAAGTCTTCTAGATCTTTCCATTCCATATAGTTAGTTCTGTCTCTCCTCTTTTC-TTTTTTTTATAATTATTTTGGATGAACATTTGGGGAGGTAGAAATATTTCATACGCACACATTATATCCTATACACA--TTTAAGAGACTAAGTGTCTGGCTTTCTGGCTCCCAAGATGATATCTAGAAAAATTAATAGAAATTAAATCTATGCCCTACCCAGTAGACTATTAGAAGCTCTTTCCTACCGCTGTGTCCTACATAAAACACCTCATACTCCAGACTGTGAGGTCTGAAAACACAGAAAAGCAAAA-ACCGTGTTCAGCAATGAAAAGAACATGATTTGTCACGTGGCAGGGATTTCCCCACTGACCAATTAAAATAAGAAGCCCCATCTTCTCTTCTTTAACTAGAGGATAGTCATAACAAAGGATTTTTT----TTAGTAGGCGATAAAATAGAGAGAAACTGATGAGCATCTTCAAGGCTTCTCAGGGACATTAAACATCCCCCTAACAAAGACTAGAGAGAAGAAACACACTGGTATGCTTCATGTTCTTTTGGAATAT------------------------------------------TTGGGTATCTTAGAGAGACACTAACAATTTTGTCCTATGAGATCACAGTAAAAAACT-ATATATTCAGCCA-TTTCAAACTCACTTTAGAAAAG-----AAAAAAGTATACAAAATGCATAGCTGATTATAGCTGTCATTTCTATTCTTTTGTATATATCACAT-------------------------------------------------------------------------GACACCAATGTCAAAAATTAATTATAAAAGTAGTTACAAGTAGTTACTTTTATAATTATACAGCTAAAAATGAATATAAGTTATATTTTTACTCATGGTTTTGGTGTTGTCAAAGCT---CATATTTCAG-CATAATCC-TTTATTTGCTGTTGAGTTGTGGAGTTTATTTGG s panTro4.chr21 3735499 982 + 32799110 TGGGCCCTCTGTTGAATATACAATTCAATTTTAGTTTCAACTTCATTAGCTGAGGTAAATTATCACATTGGCATCCCA-TAATATCATTTCACTTTACTTAGAAGGCTTCTAGATCTTTCCATTCCATATAGTTAGTTCTCTCTTTCCTCTTTTC-TTTTTTTTGTAATTATTTTGGATGAACATTTGGGGAGGTAGAAATATTTCATACGCACACATTATATCCTGTACACG--TTTAAGAGACTAAGTGTCTGGCTTTCTGGCTCCCAAGATGATATCTAGAAAAATTAATAGAAATTAAATCTATGCCCTGCCCAGTAGACTATTAGAAGCTCTTTCCTACCGCTGTGTCCTACATAAAACACCTCATACTCCAGACTGTGAGGTCTGAAAACACAGAAAAGCAAAA-ACCGTGTTCAGCAATGAAAAGAAAATGATTTGTCACGCGGCAGGGATTTCCCCACTGACCAATTAAAATAAGAAGCCCCATCTTCTCTTCTTTAACTAGAGGATAGTCATAACAAAGGATTATTT----TTAGTAGGCGATAAAATAGAGAGAAACTGATGAGCATCTTCAAGGCATCTCAGGGACATTAAACATCCCCCTAACAAAGACCAGAGAGAAGAAACACACTGGTATGCTTCATGTTCTTTTGGAATAT------------------------------------------TTGGGTATCTTAGAGAGACACTAACAATTTTGTCCTATGAGATCAC-GTAAAAAACT-ATATATTCAGCCA-TTTCAAACTCACTTTAGGAAAG-----AAAAAAGTATACAAAATGCATAGCTGATTATAGCTGTCATTTCTATTCTTTTGTATATATCACAT-------------------------------------------------------------------------GACACCAATGTCAAAAATTAATTATAAAAGTAGTTACAAGTAGTTACTTTTATAATTATACAGCTAAAAATGAATATAAGTTATATTTTTACTCATGGTTTTGGTGTTGTCAAAGCT---CATATTTCAG-CATAATCC-TTTATTTGCTATTGAGTTGTGGAGTTTATTTGG i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16998629 979 + 48394510 TGGGCCCTCTGTTGAATATACAATTCAATTTTAGTTTCGACTTCATTAGCTGAGGTAAATTATCACATTGGCATCCCA-TAATATCATTTCACTTTACTTAGAAGGCTTCTAGATCTTTCCATTCCATATAGTTAGTTC--TCTCTCCTCCTTTC-TCTTTTTTATAATTATTTTGGATGAACA-TTGGGGAGGTAGAAATATTTCATACGCACACATTATAGTCTATACACG--TTTAAGAGACTAAGTGTCTGGCTTTCTGGTTCCCAAGATGATTTCTAGAAAAATTAATACAAATTAAATCTATGCCCTGCCCAGTAGACTATTAGAAGCTCTTTCCTACCACTGTGTCCTACATAAAACACCTCATACTCCAGACTGTGAGGTCTGAAAACACAGAAAAGCAAAA-ACTGTGTTCAGCAATGAAAAGAACATGATTTGTCACGCGGCAGGGATTTCCCCACTGACCAATTAAAATAAGAAGCCCCATCTTCCCTTCCTTAACTAGAGGATAGTCATAACAAAGGATTTTTT----TTAGTAGGAGATAAAATCGAGAGAAACTGATGAGCATCTTCAAGGCTTCTCAGGGACATTAAACATCCCCCTAACAAAGACCAGACGGGAGAAACACACTGGTATGCTTCATGTTCTTTTGGAATAT------------------------------------------TTGGGCATCTTATGGAGAAACTAACAACTTTGTCCTATGAGATCACAGTAAAAAACT-ATATATTCAGCCA-TTTCAAACTCACTTTAGAAAAG-----AAAAAAGCATACAAAATGCATAGCTGATTATCGCTGTCATTTCTATTCTTTTGTATATATCACAT-------------------------------------------------------------------------GACACCAATGTCAAAAATTAATTATAAAAGTAGTTACAAGTAGTTACTTTTATAATTATACAGCTAAAAATGAACATAAGTTATA-TTTTACTCATGGTTTTGGTGTTGTCAAAGCT---CATATTTCAG-CATAATCC-TTTATTTGCTATTGAGTTGTGGAGTTTATTTGA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4495483 975 + 32716333 TGGGCCCTCTGTTGAATATACAATTCAATTTTAGTTTCGACTTCATTAGCTGAGGTAAATTATCACATTGGCATCCCA-TAATATCATTTCACTTTACTTAGAAGGCTTCTAGATCTTTCCATTCCATATAGTTAGTTC--TCTCTCTCCTTTCT-TTTTTTTAATATTTATTTTGGATGAACATTTAGGGAGGTAGAAATATTTCATACGCACACATTATATCTTATACATG--TTTAAGAGACTAAGTGTCTGGCTTTCTGGCTCCCAAGATGATATCTAGAAAAATTAATACAAATTAAATCTATGCCCTGCCCAGTAGACTATTAGAAGCTCTTTCCTACCGCTGTGTCCTACATAAAACACCTCATACTCCAGACTGTGAGGTCTGAAACCACAGAAAAGCAAAA-ACTGTGTTCAGCAATGAAAAGAACACGATTTGTCACGCGGCAGGGATTTCCCCATTGACCAAGTAAAATAAGAAGCCCCATCTTCTCTTCTTTAACTAGAGGATAGTCATAACAAAGGATT-TTT----TTAGTAGGAGATAAAATAGAGAGAAACTGATGAGCATCTTCAAGGCTTCTCAGGGACATTAAACATCCCGCTAACAAAGACCAGACAGAAGAAACACACTGCTATGCTTCATGTTCTTTTGGAATAT------------------------------------------TTGAGTATCTTAGGGAGAAACTAACAATTTTGTCCTATGAGATCACAGT-AAAAACT-ACATATTCAACCA-TTTCAAACTCACTTTAGAAAAG-----AAAAAAGT-TACAAAATGCATAGCTGATTATAGCTGTCATTTCCATTCTTTTATTTATATCACAT-------------------------------------------------------------------------GACGCCAATGTCAAAAATTAATTGTAAA---AGTTACAAGCAGTTACTTTTATAATTATACAGCTAAAAATGAATATAAGTTATATTTTTACTCCTGGTTTTGGTGTTGTCAAAGCT---CATATTTCAG-CATAATCC-TTTATTTGCTATTGAGTTGTGGAGTTTATTTGG i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168611545 1045 - 198365852 TGGGCCTTCTGTTGAATATACAATT-AATTTTAGTTTTGACTTCATTAGCTGAGGTAAATTATCACATTGGCATCCCA-TAATATCATTTCACTTTACTTAGAAGGCTTCTAGATCTTTCCATTCCATATAGTTAGTTCTCTCTCTCCCCTTTTCTTTTTTTTTATAATTATTTTGGATGAACATTTGGGGAGATAGAAATATTTCATATGCACATATTATATCCTATACATG--TTTAAGAGACTAAGTGTCTGGCTTTCTGACTCTCAAGATGATATCTAGAAAAATTAATACAAATTAAATCTATGCCCTGCCCAATAGACTATTAGAAGCTCTTTCCTACCACTGTGTCCTACATAAAACACCTCATACTCCAGACTGTGAGGTCTGAAAACACAGAAAAACAAAA-ACTGTGTTCAGCAATGAAAAGGATATGATTTGTCATGTGGCAGGGATTTCCCCACTGACCAATTAAACTAAGAAGCCCCATCTTCTCTTCTTTAACTGGAGGATAGTCATAACAAAGGAATTTTT----TTAGTAGGAGATAAGATAGAGAGAAACTGATGAGTATCTTCAAGGCTTCTCAGGGACATTAAACATCCCCCTAACAAAGACCAGACAGAAGAAACACGCTGGTATGCTTCATGTTCTTTTGGAATAT------------------------------------------TTGGGCATCTTAGGGAGAAACTAACAATTTTGTCCTATGAGATCACAGTAAAAAACT-ATATATTCAGCCA-TTTCAAACTCACTTTAGAAAAGG----AAAAAAGTATACAAAGTGCATAGCTGATTATAGCTGTCATTTCTATTCTTTTGTATATATCACGTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACACCAGTGTCAAAAATTAATTATAAA----------AGTAGTTACTTTTATAATTATACAGCTAAAAATGAATAT--GTTATATTTTTACTCATGGTTGTGGTGTTGTCAAAGCT---CCTATTTCAG-CATAATCC-TTTATTTGCTATTGAGTTGTGGAGTTTATTTGG i rheMac3.chr3 I 350 I 1 s macFas5.chr3 162275221 968 - 192294377 TGGGCCCTCTGTTGAATATACAATT-AATTTTAGTTTTGACTTCATTAGCTGAGGTAAATTGTCACATTGGCATCCCA-TAATATCATTTCACTTTACTTAGAAGGCTTCTAGATCTTTCCATTCCATATAGTTAGTTCTCTCTCTCCCCTTTTCTTTTTTTTTATAATTATTTTGGATGAACATTTGGGGAGATAGAAATATTTCATATGCACATATTATATCCTATACATG--TTTAAGAGAC----TGTCTGGCTTTCTGACTCTCAAGATGATATCTAGAAAAATTAATACAAATTAAATCTATGCCCTGCCCAATAGACTATTAGAAGCTCTTTCCTACCACTGTGTCCTACATAAAACACCTCATACTCCAGACTGTGAGGTCTGAAAACACAGAAAAACAAAA-ACTGTGTTCAGCAATGAAAAGGATATGATTTGTCATGTGGCAGGGATTTCCCCACTGACCAATTAAACTAAGAAGCCCCATCTTCTCTTCTTTAACTGGAGGATAGTCATAACAAAGGAATTTTT----TTAGTAGGAGATAAGATAGAGAGAAACTGATGAGTATCTTCAAGGCTTCTCAGGGACATTAAACATCCCCCTAACAAAGACCAGACAGAAGAAACACGCTGGTATGCTTCATGTTCTTTTGGAATAT------------------------------------------TTGGGCATCTTAGGGAGAAACTAACAATTTTGTCCTATGAGATCACAGTAAAAAACT-ATATATTCAGCCA-TTTCAAACTCACTTTAGAAAAGA----AAAAAAGTATACAAAGTGCATAGCTGATTATAGCTGTCATTTCTATTCTTTTGTATATATCACAT-------------------------------------------------------------------------GACACCAGTGTCAAAAATTAATTATAAA----------AGTAGTTACTTTTATAATTATACAGCTAAAAATGAATAT--GTTATATTTTTACTCATGGTTGTGGTGTTGTCAAAGCT---CCTATTTCAG-CATAATCC-TTTATTTGCTATTGAGTTGTGGAGTTTATTTGG i macFas5.chr3 C 0 I 1 s papAnu2.chr3 150970314 967 - 180432695 TGGGCCCTCTGTTGAATATACAATTCAATTTTAGTTTTGACTTCATTAGCTGAGGTAAATTATCACATTGGCATCCCA-TAATATCATTTCACTTTACTTAGAAGGCTTCTAGATCTTTCCATTCCATAGAGTtagttctctctctccccttttc-ttttttttataattattttggatGAACATTTGGGGAGATAGAAATGTTTCATATGCACACATTATATCCTATACATG--TTTAAGAGACTAAGTGTCTGGCTTTCTGACTCCCAAGATGATATctagaaaaattaatacaaattaaatctATGCCCTGCCCAGTAGACTATTAGAAACTCTTTCCTACCACTGTGTCCTACATAAAACATCTCATACTCCAGACTGTGAGgtctgaaaacacagaaaaacaaaa-actgtgttcagcaatgaaaaggataTGATTTGTCATGCGGCAGGGATTTCCCCACTGACCAATTAAAATAAGAAGCCCCATCTTCTCTTCTTTAACTGGAGGATAGTCATAACAAAGGAAttttt----ttAGTAGGAGATAAGATAGAGAGAAACTGATGAGTATCTTCAAGGCTTCTCGGGGACATGAAACATCCCCCTAACAAAGACCGGACAGCAGAAACACGCTGGTGTGCTTCATGTTCTTTTGGAATAT------------------------------------------TTGGGCATCTAAGGGAGAAACTAACAATTTTGTCCTATGAGATCACAGTAAAAAACT-ATATATTCAGCCA-TTTCAAACtcactttagaaaaga----aaaaaagtatacaaaatgcATAGCTGATTATAGCTgtcatttccattcttttgtatatatCACAT-------------------------------------------------------------------------GACACCAGtgtcaaaaattaattataaa----------agtagttacttttataattatacagctaaaaatgaa-------tatatttttactcATGGTTGTGGTGTTGTCAAAGTT---CCTATTTCAG-CATAATCC-tttatttgctattgagttgtggagtttatttgg i papAnu2.chr3 C 0 I 1 s chlSab2.chr2 15059908 965 - 90373283 TGGGCCCTCTGCTGAATATACAATT-AATTTTAGTTTTGACTTCATTAGCTGAGGTAAATTATCACATTGGCATCCCA-TAATATCATTTCACTTTACTTAGAAGGCTTCTAGATCTTTCCATTCCATATAGTTAGTTCTCTCTCCCCCCCTTTTCTTTTTTTTATAATTATTTTGGATGAACATTTGGGGAGATAGAAATATTTCATATGTACACATTATATCCTACACATG--TTTAAGGGACTAAGTGTCTGGCTTTCTGACTCCCAAGATGATATCTAGAAAAATTAATACAAATTAAATCTATGCCCTGCCCAGTAGACTATTAGAAGCTCTTTCCTACCGCTGTGTCCTACATAAAACACCTCATACTCCAGACTATGAGGTCTGAAAACACAGAAAAACAAAA-ACTGTGTTCAGCAATGAAAAGGATATGATTTGTCATGCGGCAGGGATTTCCCCACTGACCAATTAAAATAAGAAGCCCCATCTTCTCTTCTTTAACTGGAGGATAGTCATAACAAAGGAATTTTT----TTACTAGGAGATAAGATAGAGAGAAACTGATGAGTATCTTCAAGGCTTCTCAGGGACATGAAACATCCCCTTAACAAAGACCAGACAGAAGAAACACGCTGGTATGCTTCATGTTCTTTTGGAATAT------------------------------------------TTGGGCATCTTAGGGAGAAACTAACAATTTTGTCCTATGAGATCACAGCAAAAAACT-ATATATTCAGCCA-TTTCAAACTCACTTTAGAAAAG-----AAAAAAGTATACAAAATGCATAGCTGATTATAGCTGTCATTTCCATTCTTTTGTATATATCACAT-------------------------------------------------------------------------GACACCAGTGTCAAAAATTAATTATAAA----------AGTAGTTACTTTTATAATTATACAGCTAAAAATG--------TTATATTTTTACTCATGGTTGTGGTGTTGTCAAAGCT---CCTATTTCAG-CATAATCC-TTTATTTGCTATTGAGTTGTGGAGTTTATTTGG i chlSab2.chr2 C 0 I 1 s calJac3.chr21 21967095 939 + 50472720 TGGCTCCTCTGTTGAATATACAATTCAATTTTTGTTTCTACTTCATTAGCTGAGGTAAATTATCACATTGGCATCCCA-TAAT----TATCATTTCACTTAAAAGGCTTCTAGATCTTTTCATTCTATATAGTTAATGCTTTCTCCCCCCTTTTCTTTTTTTTAATAATTATTTTGGATGAACATTCGGGGAGATAGAAATATTTCATATACACATGTTATCTCTTATCCATG--TTTAAGAGACTATGTGTCTGGCTTTCTGGCTCCCAAGATGATATCTAGAAAAATTAATACAAATTAAATCTACG-CCTGCCCAGTAACCTATTAGAAGCCCTTTCCTACCACTGTGTCCTACATAAAACACCTCATACTCCAGACTGTGAAGTCTGAAAACACAGAAAAGCAAAA-ACCGTGTTTAGCAATGAAAAGGAGATGATTTGTCACATGTCAGGGATTTCCCCACTGACCAATTAAAATAAGAAACACCATCTTCTCTTCTTTAACTGGAGGATAGTCATAACAAAGAA--TTTT----TTAGTAGGAGATAAAAT----AGACACTGATGAGCATCTTCAAGGCTTCTCAGGGACATTAAACATCCCTCTAACAAAGACCACACAGAAGAAACACATTGGTATGCTTCATGTTCTTTTGGAATAT------------------------------------------TTGGGTATCTTAGGGAGAAAC--ACAATTTTGTCCTGTGAGATCACAGTGAAAAAAC----TATTCAACCATTTTCAAACTCACTTCAGAAAAGA----AAAAAAGTATACAGAACGCATAGCTGATTATAGATGTCAT-----TTCTTTTATATATATCACAT-------------------------------------------------------------------------GATACCCATGTTAAA---TAATTATAAA----------AGTA-----------AATT-TACAGCTAAAAATGAATAT--GTTATATTTTTAATCATAGTTTTGATGTCGTCAATGCT---CATATGTCAG-CCTAATCCTTTTATTTGCTATTGAGTTGTGGAATTTATTTGG i calJac3.chr21 C 0 I 335 s mm10.chr16 78151564 904 + 98207768 TAGCCCTATTATTG-ATAAGAAATTGAATTTTTGTTCCTACTTGACTAGCTAAGTTTAATTATCATACTGACAACCAGTTGATAAGGTTTTACATCATATAGCACTCTTCTGGATCTTTCTCTTCTATACATTCAGCGATTTCTCTCCTC------TCATTTTTGTAATTATTTTGCATAGTTA-------AGAT--GAATATTT-GCACATATATACTATATTCTACCCATG--TTTAGGAGTCTG------CTGTTTTATGCTACTTAAGATATAAGCTAGAAAAGTC--CAGAAAATAA--------CCTGTTCAGCTCTCTATTACAA--TCTATCTTA-TGCTGCAACCAAAATAAAATATCTCACGATGCAGACAC--AGGGCAGAAAGTACAAGAAAACAAAA-ACTATATTCAGCAAAGAGAAAAA---GATTTGTCACAAAGCA-GGATTTCCCCACTGACTAATTAAAGTAAGAAACA-CATCTTGCCTTCTGTAAGCAGAGGATGGTCCt---------ttttttattattattattatataaaCT----AGAAACAGATGACCATTGTGAAGGCTTCTCAGGGATATTAAACATCCC--TAACAAAGACCAAACAGAGGAAACACACCAATATGCTTTA---------AAAATGTCAGGG-------------------------------------CAGGGCACCTTAAGGACAAGCTAGCAAGTTTGTCCTCTGAGATCACAGCAAAGAAATGATGGGCCCAGCAA-TTTCAAACTCGTGTCAAGAAAAGAG-TCAGAAGGGAAGTGAAAGACCTAGCTCATTAAAGTTGACATTTGTCTTCTTTTACATATGTCACAT-------------------------------------------------------------------------GATCCCAATGACAAAAGTTAAATATGAA----------GGTA-TTACT----------GGTGGCTAGCAATGAATGTGGAGTATGTTTTCAGTCT---------TGCCAACAAAGTTCGCCATATCTCAA-CCT-GTCG-TAAATTTGCTATTGAGTTATGGAGCAAGCTTAG i mm10.chr16 C 0 C 0 s canFam3.chr31 13853418 993 + 39895921 ----CAGTCTATTGCATATAAAATGAAATTTTGGTTTCTTCTTTATTAACAAGAGTGAATTATCATATTGGCACCCCA-TGATATCATTTCTCCTCATGTAGTAGGCTTCTAGATTTTTCCATTCCATGTACTCCGTACTCTCTCTCCCATTGTC-TTATTTTTGCAATTATTTTGGACAAAGATTTTTAGAGCTAGAAATATTTTATGCACATGCAGTATTTCCTCTCCAAGTTTTTGAGAGATTGGGTCTGTGGTTTTTGAGTTCCCAAAATGAGAGCTGGAAAAATTAATACAAATTAAATCAATGTCCTGTTCAGTAGACTATTAGAAGCTCCTTCTTACTGTTGTGTCTTAGATAAAACATCCCATGCTCCAG------AGGACAGAAAATACAGGAAAGTAAAATATTGTGTTCAATAGTGAAAGAGAA--GATTTGTCACCTGTCAGATAGTTCTCCATTGACCGAATAAAATTAGAAACCCTATCTTCTCTTCTTTAACTGGAAGATGGTCACAACAAAGGA--TTTT----TGAGCTAGGGATAAAATAGAGATAAACTGATGAGCAT-TTCAAGGCTTCTCAGAGACATTAAATGGCCTCCTACCAAAAATCAGATGGAAGAAACACACTGATATGCTTCATGTACTTTTGAAATACTGGGGCATCttttttttttttttttttttttttttttAATACTGGGGCATCTTAGTGAGGAACTAGCAATTTTGTTCTTTGAGAGCACAGT-AAAAGCC-ATACATTCAACCA-TTCCAAACACACCTCAGGAAAGAGGAAAAAGAAGTATACAAAATGCATAGCCAATTAAAGCTGTCATTTCGCTTCTTTTACTTATATCACAT-------------------------------------------------------------------------GATCCCAATGTTAAAAATTAATTACAAA----------AGCAAT----------ATT-TACAGCTAAAAATGAATATGGATTGTATTTTGACTCACGGTTTCAGTGTTTTCAGACCT----ATCTCTCAGACTCACTCT-TTAATTTGCAATTGAGTTGTG---TTTATCTGG i canFam3.chr31 C 0 I 1 a score=1358080.000000 s hg38.chr21_KI270874v1_alt 122547 399 + 166743 TTTTTAAGTGCAATTTATTTTTTCTTTATTTGTACATTAATTATTGAAAAAAACAAGAAGAATATTAAATAAAACCAACATACATGGAGATATATCCTGTAGTAGAATGC-TTTCTTTGGCTTTC------ATGATTAAAATGTTAATGAAGTGGACAAGCAGTTC-TTTAATAATATGAAGCAATAAACATAAGGGAAGAAGAAGGTAAAAAAATA----AAATGATGTGACTCACCCATGTCAAATATTGCATACCCATCACCAAATCTAAAAA-CTATTCA-CGTAGGTATATTGTAGTCCATGTCTTTAACA----TCAATTACAACCCCCCCTTTCCTCAAGATT-AGCCACAGGACAAATTAGAAGCTGCTCTGTGGATGCTGCTTCTCTTTAAAAACTGGTTTCCCTGAAT s panTro4.chr21 3736481 398 + 32799110 TTTTTAAGTGCAATTTATTTTTTCTTTATTTGTACATTAATTATTGAAAAAAACAAGAAGAATATTAAATAAAACCAACATACATGGAGATATATCCTGTAGTAGAATGC-TTGCTTTGGCTTTC------ATGATTAAAATGTTAATGAAGTGGACAAGCAGTTC-TTTAATAATATGAAGCAATAAACATAAGGGAAGAAGAAGGTAAAAAAATA----AAATGATGTGACTCACCCATGTCAAATATTGCATACCCATCACCAAATCTAAAAA-CTATTCA-CGTAGGTATATTGTAGTCCATGTCTTTAACA----TCAATTACAA-CCCCCCTTTCCTCAAGATT-AGCCACAGGACAAATTAGAAGCTGCTCTGTGGATGCTGCTTCTCTTTAAAAACTGGTTTCCCTGAAT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 16999608 397 + 48394510 TTTTTAAGTGCAATTTATTTTTTCTTTATTTGTACATTAATTATTG-AAAAAACAAGAAGAATATTAAATAAAACCACCATACATGGAGATATATCCTGTAGTAGAATGC-TTTCTTTGGTTTTC------ATGATTAAAATGTCAATGAAGTGGACAAGCAGTTC-TTTAATAATATGAAGCAATAAACATAAGGGAAGAAGAAGGTAAAAAAATA----AAATTATATGACTTGCCCATGTCAAATATTGCATACCCATCACCAAATCTAAAAA-CTATTCA-TGTAGGTATATTGTAGTCCATGTCTTTAACA----CCAATTACAA-CCCCCCTTTCCTCAAGATT-AGCCACAGGACAAATTAGAAGCTGCTCTGTGGATGCTGCTTCTCTTTAAAAACTGGTTTCCCTGAAT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4496458 393 + 32716333 TTTTTAAGTGCAATTTATTTTTTCTTTATTTGTACATTAATTATTG-AAAAAACAAGAAGAATATTAAATAAAACCAACATACATGGAGATATATCCTGTAGTAGAATGC-TTTCTTTGGCTTTC------ATGATTAAAATGTTAATGAAGTGGACAAGCAGTTC-TTTAATAATATGAAGCAATAAACATAAGGGAAGAAGA---TAAAAAAATA----AAATGATGTGACTCGCCTGTGTCAAATATTGCATACCCATCACCAAATCTAAAAC-CTATTCA-CGTAGGTATATTGTAGTCCGTGTCTTTAACA-----CAGTTACAA-CCCTCCTTTCCTCAAGATT-AGCCACAGAACAAATTAGAAGCTGCTCTGTGGATGCTGCTTCTCTTTAAAAGCTGGTTTCCCTGAAT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168612591 397 - 198365852 TTTTTAAGTGCAATTTATTTTTTCTTTATTTGTACATTAATTATTG-ATAAAACAAAAACAATATTAAAGAAAACCAACATACATGGAGATACATCCTGTAGTAGACTGC-TTTCTTTGGCTTTC------ATGATTAAAATGTTAATGAAGTGGACAAGCAGTTCTTTTAATAACATGAAACAATAAACATAAGGGAAGAAGAAGGTTAAAAAAAA----AAATGATGTGACTCGCCCATGTCAAATATTGCATACCCATCACCAAATCTAAAAA-CTATTCA-TGTAGGTGTACTGTAGTCCATGTCTTTAATA----CCAGTCACAA--CCCCCTTTCCTCAAGATT-AGCCACAGGACAAATTAGAAGCTGCTCTGTGGATGCTTCTTCTCTTTAAAAACTGGCTTCCCTGAAT i rheMac3.chr3 I 1 C 0 s macFas5.chr3 162276190 397 - 192294377 TTTTTAAGTGCAATTTATTTTTTCTTTATTTGTACATTAATTATTG-ATAAAACAAAAACAATATTAAAGAAAACCAACATACATGGAGATACATCCTGTAGTAGACTGC-TTTCTTTGGCTTTC------ATGATTAAAATGTTAATGAAGTGGACAAGCAGTTCTTTTAATAACATGAAACAATAAACATAAGGGAAGAAGAAGGTTAAAAAAAA----AAATGATGTGACTCGTCCATGTCAAATATTGCATACCCATCACCAAATCTAAAAA-CTATTCA-TGTAGGTGTACTGTAGTCCATGTCTTTAATA----CCAGTCACAA--CCCCCTTTCCTCAAGATT-AGCCACAGGACAAATTAGAAGCTGCTCTGTGGATGCTTCTTCTCTTTAAAAACTGGCTTCCCTGAAT i macFas5.chr3 I 1 C 0 s papAnu2.chr3 150971282 398 - 180432695 tttttaagtgcaatttattttttctttatttgtacattaattattg-aaaaaacaaaaacaatattaaagaAAACCAACATACATGGAGATACATCCTGTAGTAGACTGC-TTTCTTTGGCTTTc------atgattaaaatattaatgaagtgGACAAGCAGTTCTTTTAATAATATGAAGCAATAAACATAAGGGAagaagaaggtt-aaaaaaa----aaatgatgtgacTCGCCCATGTCAAATATTGCATACCCATCACCAAATCTAAAAACCTATTCA-TGTAGGTGTACTGTAGTCCATGTCTTTAATA----CCAGTCACAA-CCCCCCTTTCCTCAAGATT-AGCCACAGGACAaattagaaactgctctgtggatgcttcttctctttaaaaactgGCTTCCCTGAAT i papAnu2.chr3 I 1 C 0 s chlSab2.chr2 15060874 401 - 90373283 TTTTTAAGTGCAATTTATTTTTTCTTTATTTGTACATTAATTATTG-AAAAAACAAAAACAATATTAAAGAAAACCAACATACACGGAAATACATCCTGTAGTAAACTGC-TTTCTTTGGCTTTC------ATGATTAAAATGTTAATGAAGTGGACAAGCAGTTCTTTTAATAATATGAAGCAATAAACATAAGGGAAGAAGAAGGTAAAAAAAAAAAATAAATGATGCGACTCACCCATGTCAAATATTGCATACCCATCACCAAATCTAAAAA-GTATTCA-TGTAGGTGTACTGTAGTCCATGTCTTTAATA----CCAGTCACAA--CCCCCTTTCCTCAAGATT-AGCCACAGGACAACTTAGAAGCTGCTCTGTGGATGCTTCTTCTCTTTAAAAACTGGCTTCCCTGAAT i chlSab2.chr2 I 1 C 0 s calJac3.chr21 21968369 385 + 50472720 TTTTTAACTGCAATTCATTT----TTTATTTGTACCTTATT------AAAAAACAAAAAAAA-ATTAAAGAAAACCAACATACATGAAGATATATCCTGTAATAGAATGC-TTTCTTTGGCTTTC------ATGATGAAAATGTTAACGAAGTGGGCAAGCAGCTCTTTTAATAATATGAAGCAATAAACATAAGGGAAAAAGAACGTAAAAAAATT----AAATGAAGTGACTTGCCCATGTCAAATATTGCATACTCATCACCAAATTTAAAAA-C--TTCA-CGCAGGTGTATTGTAGTCCATGCATTTAATA----CCAGTTACAA--CCCCCTTACCCCAAGGTT-AGCCACAGGACAAATTAGAAGCTGCTCTGTAGATCCATATTCTCTTTAAAAACTGGTTTCCCTGAAT i calJac3.chr21 I 335 C 0 s mm10.chr16 78152468 371 + 98207768 CCTTTTAACACAATTT--------TTTATTTGTATATTAATTCTTT-AAAAGTTAAAAAGAATGATAAGAAA---CAACTTATGTGAAGAAATTTTCTGCTACAGAAAGG-TTTCTCTTTTTTTCCTGGTAATGATTAAAATATGAATAAAGTGAACAACCAGCCA-TTCAA-AGAATGAGACAATAAATATA---GTATGAGAAAGTTAAAACATT--TTTATTGATATGGCTC--------------------ATCCATTACCCAAAACAACGC-CTGTTCATTGCTGGTATATTGGAGTCCATTTCATAAATAAACACCAATTATTC--TCACCTTGCTTTACTGTCAAACCAAAGGACAAATCAGAACCTCCCTT----ATGCAattttatgtgtatgagtattttacctgcat i mm10.chr16 C 0 I 325 s canFam3.chr31 13854412 368 + 39895921 TTTTCAAATGCAATTTATTCTTTCTTTATTTGCACATTAATTATTA-AAAA------------CTGAGAGAAAATCAACACATATGAAGATAC------------AATGCTTTTCTCTGCTCCTA------ATGATTAAAATGTTAATAAAGTGGACAAGACACATTTTCAAGAATATGAGACAATAAACATGAGGAAAGAAG---GTAAAAAAAAA----AAGTGATGTGACCTGTCAATGTCAAATACTGAGCACTCATTACCAAAACTAAAGA-TTATTCACTGCAGGTGTAGTACAGCACATACCTCAGATAAACGCCAATTA-----CCCCCTCACCCTGAG-TC-AGCCTAAGGACAGATTGGAAACTGCTTTGTGGATACTTCTC----TTAGAAAATGGTTTCCCTGAAT i canFam3.chr31 I 1 C 0 a score=218366.000000 s hg38.chr21_KI270874v1_alt 122946 68 + 166743 -CAATAATACTGAACTTGACCTAGTTAGAAAGTATGTTCACAGAAATAACCCTCAGTCTTCACCTGTTA s panTro4.chr21 3736879 68 + 32799110 -CAATAATACTGAACTTGACCTAGTTAGAAAGTATGTTCACAAAAATAACCCTCAGTCTTCACCTCTTA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 17000005 68 + 48394510 -CAATAATGCTGAACTTGACCTAGTGAGAAAGTATGTTCACAAAAATAACCCTCAGTCTTCACCTGTTA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4496851 68 + 32716333 -CAATAATAGTGAACTTGACCTAGTTAGAAAGTATGTTCACAAAAATAAGCCTCAGTCTTCACCTGTTA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168612988 68 - 198365852 -CCCTAATAGTGAACTTGACCTAGTTAGAAAGTATGTTCACAAAAATAACCCTCAGTCTTTGCCTGTGA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162276587 68 - 192294377 -CCCTAATAGTGAACTTGACCTAGTTAGAAAGTATGTTCACAAAAATAACCCTCAGTCTTTGCCTGTGA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150971680 68 - 180432695 -CCCTAACAGTGAACTTGACCTAGTTAGAAAGTATGTTCACAAAAATAACCCTCAGTCTTCGACTGTGA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15061275 68 - 90373283 -CCCTAACAGTGAACTTGACCTAGTTAGAAAGTATGTTCACAAAAATAACCCTCAGTCTTCGCCTGTGA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21968754 68 + 50472720 -CATCAATAGTAAACTTGACCTAGTTAGAGAGTATGTTCACAAAAATAACCCTTAGTCTTTGCCTGTTA i calJac3.chr21 C 0 C 0 s canFam3.chr31 13854780 69 + 39895921 CAGCTAATAGGAATCATGATCTAGTTATGAAGTATGTTCTCAAAAATTATCCACAATACTTGCTCGTTA i canFam3.chr31 C 0 C 0 e mm10.chr16 78152839 325 + 98207768 I a score=431279.000000 s hg38.chr21_KI270874v1_alt 123014 165 + 166743 AAAGTGAAGATTTATTGcttgggtggctga-ggctagaagatcatttgagcctaggagctggaggatac----agtgcactatgatcccccacctgtgaatagccactgcactccagcctgggcaatataacaagaccccatctc--tt-----------aaaaaaaaaaaaaGTTTTTAATT s panTro4.chr21 3736947 171 + 32799110 AAAGTGAAGATTTATTGcttgggtggctga-ggctagaagatcatttgagcctaggagctggaggatac----agtgcactatgatcccccacctgtgaatagccactgcactccagcctgggcaacataacaagaccccatctc--tt-----aaaaaaaaaaaaaaaaaaaGTTGTTAATT i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 17000073 163 + 48394510 AAAGTGAAGATTTATTGcttgggtggctga-ggctagaagatcatttgagcctaggagctggaggatac----agtgcactatgat--cccacctgtgaatagccactgcactccagcctgagcaacataaaaagaccccatctc--tt-----------aaaaaaaaaaaaaGTTCTTAATT i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4496919 141 + 32716333 AAAGTGAAGATTTATTGCTTGGGTGGCTGA-GGCTAGAAGATCATTTGAGCCTA--------------------------TATgat--cccacctgtgaatagccactgcactccagcctgggcaacacaacaagaccccatctc--tt-----------aaaaaaaaaaaaaGTTTTTAATT i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168613056 161 - 198365852 AAAGTGAAGATCTATTGcttgggtggctga-ggctagacgatcatttgagcctaggagctggaggatac----agtgcactgtgat--cccacctgtgaacagccactgcactccagcctgggcaacataataagaccccatctc---------------aaaaaaaaaaaaaGTTTTTAATT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162276655 165 - 192294377 AAAGTGAAGATTTATTGcttgggtggctga-ggctagacgatcatttgagcctaggagctggaggatac----agtgcactgtgat--cccacctgtgaacagccactgcactccagcctgggcaacataataagaccccatctcaaaa-----------aaaaaaaaaaaaaGTTTTTAATT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150971748 163 - 180432695 AAAGTGAAGATTTAttgcttgggtggctga-ggctagaagatcatttgaacctaggagctGGAGGATAC----GGTGCACTGTGAT--Cccacctgtgaacagccactgcactccagcctgggcaatataacaagaccccatctc--aa-----------aaaaaaaaaaaaagtttttaatt i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15061343 162 - 90373283 AAAGTGAAGATTTATTGcttgggtggctga-ggctagaagatcatttgagcctaggagctggaggatac----agtgcactgtgat--cccacctgtgaacagccactgcactccagcctgggcaatataacaagaccccatctc---a-----------aaaaaaaaaaaaaGTTTTTAATT i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21968822 178 + 50472720 AAAGTGAAGATTTATTGCCTgggtagctgagggttagggttagacttgagacc-ggagtctgaggatacagtgagtgccctatgat--tgcacctgtaaatagccactgcactccagcctaggcaacttaacaagaccccatctc--taaaaaaaaaaaaaaaaaaaaaaaaaaaaaTTAATT i calJac3.chr21 C 0 C 0 e canFam3.chr31 13854849 0 + 39895921 C e mm10.chr16 78152839 325 + 98207768 I a score=35739.000000 s hg38.chr21_KI270874v1_alt 123179 9 + 166743 AAAAAGTGA s panTro4.chr21 3737118 9 + 32799110 AAAAAGTGA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 17000236 9 + 48394510 AAAAAGTGA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4497060 9 + 32716333 AAAAAGTGA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168613217 9 - 198365852 AAAAAGTGA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162276820 9 - 192294377 AAAAAGTGA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150971911 9 - 180432695 aaaaagtga i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15061505 9 - 90373283 AAAAAGTGA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21969000 9 + 50472720 AAAAAGTGT i calJac3.chr21 C 0 C 0 s canFam3.chr31 13854849 9 + 39895921 AAAAAGTGA i canFam3.chr31 C 0 C 0 e mm10.chr16 78152839 325 + 98207768 I a score=3456501.000000 s hg38.chr21_KI270874v1_alt 123188 994 + 166743 AGGTTTATTGACATTGTGACAACATGGATAATACAGATTAAGTCAGCAAACCATAAAGATTTTCCAGTGTGCCTAATGTCTAAAATTATAATTTAGTTATCATTTAGTAG-TTCCATTAAATTATTTTCTATACAGGTAATCACGTATTTGATTTCTTTTCCAATATAGGCAATTTTAAACTCAGAGAGCTGGAACTAATAAAACCTAGGGAATGGAAATCTAAATTATAAACCATTCTTTTACAGATTCCATGATTAACCTTTGAAAAAATTAAGCC--CAACCTCCAAACACAGACTATATAAAAATTATTTATAATTTGCAGGTATTAGTGGCTTAATACAGCATATATTTGCTATCAGCTTTTGCATTTTAAAAGaaaaattaaagaca------------aaaatctta---atacaaagtaataaactactaaTCA--TAAAATTCTCTCCTATATTCTTTTAGAACACAATGAAAGGAAATTATTTGCTTTTTATGAGAAACTGATATACTTTCTCTCCATAGATGATGAAAATAACTTTCTTTGACTACCAAGAAATATATAATCAAATTTGTAGACCACTTTTAA-TTTTTTAAAAAAATCCTGGATCTG---TATTTTTTACCTTCCTGACCTCTTACTATAATTTA-------------------------------TCTTTTCTCTGGTCCTGAATCTCTGTAAGCTGACTTGCTTTCAGGGGAATGACACTGTGCACATAATA-CAGCATCACCTGGGTCTTCCAAGATTTGGTCTCCACCATCACCTCACCACCACCCTGTCCCACCTGTCCACAAACAGTTTGGAAGTTTCCTCTTTTCAGCTTTCCTCTTTCCAAACTTAAGCTTCCGTATGTACAATGTAGCTC-TCTCCTACTTAAAGAAAAATAAATTCAGAGTGATCCTCCTAAAGTTGTGAAATAAGATCAGTCTGTAGTTTTTCCATCTGTCCTCCGTTGAGTCCTCCTGG--TCAGGCTCCCAGGACCTCCAACATGTGAGATTTGTGCCTCTACTTGAC s panTro4.chr21 3737127 993 + 32799110 AGGTTTATTGACATTGTGACAACATGGATAATACAGATTAAGTCAGCAAACCATAAAGATTTTCCAGTGTGCCTAATGTCTAAAATTATAATTTAGTTATCATTTAGTAG-TTCCATTAAATTATTTTCTGTACAGGTAATCACGTATTCGATTTCTTTTCCAATATAGGCAATTTTAAACTCAGAGACCTGGAACTAATAAAACCTAGGGAATGGAAATCTAAATTATAAACCATTCTTTTACAGATTCCATGATGAACCCTTGAAAAAATTAAGCC--CAACCTCCAAACACAGACtatataaaaa-tatttataatttGCAGGTATTAGTGGCTTAGTACAGCATATATTCTCTATCAGCTTTTGCATTTTAAAAGAAAAATTAAAGACA------------AAAATCTTA---ATACAAAGTAATAAACTACTAATCA--TAAAATTCTCTCCTATATTCTTTTAGAACACAATGAAAGGAAATTATTTGCTTTTTATGAGAAACTGATATACTTTCTCTCCATAGATGATGAAAATAACTTTCTTTGACTACCAAGAAATATATAGTCAAATTTGTAGACCACTTTTAA-TTTTTTAAAAAAATCCTGGATCTG---TATTTTTTACCTTCCTGACCTCCTACTATAATTTA-------------------------------TCTTTTCTCTGGTCCTGAATCTCTGTAAGCTGACTTGCTTTCAGGGGAATGACACTGTGCACATAATA-CAGCACCACCTGGGTCTTCCAACATTTGGTCTCCACCATCACCTCACCACCACCCAGTCCCACCTGCCCACAAACAGTTTGGAAGTTTCCTCTTTTCAGCTTTCCTCTTTCCAAACTTAAGCTTCCATATGTACAATATAGCTC-TCTCCTACTTAAAGAAAAATAAATTCAGAGTGATCCTCCTAAAGTTGTGAAATAAGATCAGTCTGTAGTTTTTCCATCTGTCCTCCGTTGAGTCCTCCTGG--TCAGGCTCCCAGGACCTCCAACATGTGAGATTTGTGCCTCTACTTGAC i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 17000245 990 + 48394510 AGGTTTATTAACATTGTGACAACATGGATAATATGGATTAAGTCAGCAAACCATAAAGATTTTCCAGTGTGCCTAATGTTTAAAATTATAATTTAGTTATCATTTAGTAA-TTCCATTAAATAATTTTCTATACAGGTAATCACGTATTTGATTTCTTTTCCAATATAGGCAATTTTAAACTCAGAGAGTTGGAACCAATAAAACCTAGGGAAGGGAAATCTAAATTATAAACCATTCTTTTACAGATTCCACGATTAACCCTTGAAAAAATTAAGCC--CAACCTCCAAACACAGAGtatataaaaattatttataatttGCAGGTATTAGTGGCTTAATAGAGCATATATTCTCTATCAGCTTTTGCATTTTAAAAGAAAAATTAAAGACA------------AAAATCTTA---ATACAAAGTAATAAACTACTAATCA--TAAAAT----TCCTATAttcttttataacacaatgaaaggaaattatttgc-ttttatgagaaactgatatactttctctccatagatgatgaaaataacttgctttgactaccaagaaatatatagtcaaatttgtagaccacttttaatttttttttttaaatcctgggtctg---tatttttcacctgcctgacctcctactataattta-------------------------------ttttttctctggtcccgaatctctaTAAGCTGACTTGCTTTCAGGGGAATGACACTGTGCACATAATA-CGGCACCACCTGGGTCTTCCAAGATTTGGTCTCCACCATCACCTCACCACCACCCAGTCCCACCTGCCCACAAACAGTTTGGAAGTTTCCTCTTTTCAGCTTTCCTCCTTCCAAACTTAAGCTTCCTTATGTACAATATAGCTC-TCTCCTACTTAAGGAAAAATTAATTCAGAGTGATCCTCCTAAAGTTGTGAAATAAGATCAGTCTGTAGTTTTTCCCTCTGTCCTCCATTGAGTCCTTCTGG--TCAGGCTCCCAGGACCTCCAACATGTGAGATTTGTGCCTCTACTTGAC i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4497069 994 + 32716333 AGGTTTATTGACATTGTGACAACATGGATAATACGGATTAAGTCAGCAAACCATAAAGATTTTCCAGAGTGCCTAATGTCTAAAATTATAATTTAGTTATCATTTAGTAG-TTCCATTAAATAATTTTCTATACAGGTAATCACGTATTCGATTTCTTTTCCAAAACAGGCAATTTTAAACTCAGAGAGTTGGAACTAATAAAACCTAGGGAAGGGAAATCTAAATTATGAACCATTCTTTTACAAATTCCATGATTAACCCTTAAAAAAATTAAGCC--CAACCTCCAAACACAGACTATATAAAAATTATTTCTAATTTGCAGGTATTAGTGGCTTAATACAGCATATATTCTCTATCAGCTTTTGCATTTTAAAAGaaaaattaaagaca------------aaaatctta---atacaaagtaataaactactaaTCA--TAAAATTCTCTCCTATAAtcttttagaacacaatgaaaggaaactatctgctttttatgagaaactgatatactttctctccatagatgatgaaaataacttgctttgactaccaagaaatatatagtcaaatttgtagACCACTTTTAA-TTTTTTTAAAAAATCCTGGGTCTG---TATTTTTCACCTTCCTGACCTCCTACTATAGTTTA-------------------------------TTTTTTCTCTGGTCCTGAATCTCTGCAAGCTGACTTGCTTTCAAGGGAATGGCACTGTGCATCTAATA-CAGCACCACCTGGGTCTCCCAAGATTTGGTCTCCACCATCACCTCACCACCACCCAGTCCCACCTGCCCACAAACAGTTTGGAAGTTTGCTCTTTTCAGCTTTCCTCCTTCCAAACTTAAGCTTCCATATGTACAATATAGCTC-TCTCCTACTTTAAGAAAAATAAATTCAGAGTGATCCTCCTAAAGTTGTAAAATAAGATCAGTCTGTAGTTTTTCCCTCTGTCCTCCGTTGAGTCCTCCTGG--TCAGGCTCCCAGGACCTCCAACATGTGAGATTTGTGCCTCTACTTGAC i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168613226 992 - 198365852 AGG-TTATTGACATTGTGACAACAAGGATAATATGGATTAAGTCAGCAAACCACAAAGATTTTCCAGTGTGCCTAATGTCTAAAATTATAATTTAGTTATCATTTAGTAG-TTCCATTAAATAATTTCCTATACAGGCAATCATATATTCAATTTCTTTTCCAATATAGGCAATTTTACACTCAGGGAGTTGAAACTAATAAAACCTAGGGAAGGGATATCTAAATTATAAACCATTCTTTTACAGATTCCATGATTAAATCTTGAAAATATTAAGAC--CAACCTCCAAACACAGACTACATAAAAATTATTTATAATTTGCAGGTATTAGTGGCTTAATACAGCATATATTCTCCATCAGTTTTTGCATTTTAAAAGAAAAATTACAGACA------------AAAATCTTA---ATGCAAAGTAATAAACTACTAATCA--TAAAATTCTCTCCTATATTCTTTTAGAACACAATGAAAGGAAATTATTTGCTTTTTATGAGAAACTGATATATTTTCTCTCCATAGATGACGAAAATAACTTTCTTTGACCACCAAGAAATGTATAATCAAATTTGTAGACCACTTTTAA-TTTTTTT-TTAAATTCTGGGTCTG---TATTTTTCACATTCCTGACCTCCTACTGTAAGTTA-------------------------------TTTTTTCTCCGGTCCTGAATCTCTGTAAGCTGACTTGCTTGCAGGCGAATGACACTGTGTACATAATA-CAGCACCACCTGGGTCTTCCAAGATTTGGTCTCCACCATCACCTCACCATGACCCAGTCCCACCTGCCCACAAACAGTTTGAAAGTTTCCTCTTTTCAGCTTTCCTCCTTCCAAACTTAAGCTTCCATATGTACAATACAGCTC-TTTCCTACTTAAAGAAAAATAAATTCAGAGTGATCCTCCTAAAGTTGTGAAATAAAATCTGTCTGTAGTTTTTCCCTCTGTCCTCCTTAGAGTCCTCCTGG--TCAGGCTCCCAGGACCTCCAACATCTGAAATTCGTGCCTTTATTTGAC i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162276829 992 - 192294377 AGG-TTATTGACATTGTGACAACAAGGATAATATGGATTAAGTCAGCAAACCACAAAGATTTTCCAGTGTGCCTAATGTCTAAAATTATAATTTAGTTATCATTTAGTAG-TTCCATTAAATAATTTCCTATACAGGTAATCATATATTCAATTTCTTTTCCAATATAGGCAATTTTACACTCAGGGAGTTGAAACTAATAAAACCTAGGGAAGGGATATCTAAATTATAAACCATTCTTTTACAGATTCCATGATTAACCCTTGAAAACATTAAGAC--CAACCTCCAAACACAGACTACATAAAAATTATTTAtaatttgcaggtattagtggcttaatacagcatatattctccatcagtttttgcattttaaaagaaaaattacagaca------------aaaatctta---atgcaaagtaataaACTACTAATCA--TAAAATTCTCTCCTATATTCTTTTAGAACACAATGAAAGGAAATTATTTGCTTTTTATGAGAAACTGATATATTTTCTCTCCATAGATGACGAAAATAACTTTCTTTGACCACCAAGAAATGTATAATCAAATTTGTAGACCACTTTTAA-TTTTTTT-TTAAATTCTGGGTCTG---TATTTTTCACATTCCTGACCTCCTACTGTAAGTTA-------------------------------TTTTTTCTCCGGTCCTGAATCTCTGTAAGCTGACTTGCTTGCAGGCGAATGACACTGTGTACATAATA-CAGCACCACCTGGGTCTTCCAAGATTTGGTCTCCACCATCACCTCACCATGACCCAGTCCCACCTGCCCACAAACAGTTTGAAAGTTTCCTCTTTTCAGCTTTCCTCCTTCCAAACTTAAGCTTCCATATGTACAATACAGCTC-TTTCCTACTTAAAGAAAAATAAATTCAGAGTGATCCTCCTAAAGTTGTGAAATAAAATCTGTCTGTAGTTTTTCCCTCTGTCCTCCTTAGAGTCCTCCTGG--TCAGGCTCCCAGGACCTCCAACATCTGAAATTCGTGCCTTTATTTGAC i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150971920 989 - 180432695 aGG-TTATTGACATTGTGACAACAAGGATAATACGGATTAAGTCAGCAAACCACAAAGATTTTCCAGTGTGCCTAATGTCTAAAATTCTAATTTAGTTATCATTTAGTAG-TtccattaaataattttctatacAGGTAATCATATATTCGATTTCTTTTCCAATATAGGCAATTTTACACTCAGAGAGTTGAAACTAATAAAACCTAGGGAAGGGATATCAAAATTATAAACCATTCTTTTACAGATTCCATGATTAACCCTTGAAAACATTAAGAC--CAACCTCCAAACACagactatataaaaattatttataatttgcaGGTA-TAGTGGC-TAATACAGCATATATTCTCCAtcagtttttgcattttaaaagaaaaattacagaca------------AAAATCTTA---ATGCAAAGTAATAAACTACTAATCA--TAAAATTCTCTCCTATATTCTTTTAGAACACAATGAAaggaaattatttgctttttatgagAAACTGATATATTTTCTGTCCATAGATGATGAAAATAAC-TTCTTTGACCACCAAGAAATGTATAATCAAATTTGTAGAccacttttaa-tttgttt-ttaaattctgggTCTG---TATTTTTCATGTTCCTGACCTCCTACTATAAGTTA-------------------------------TTTTTTCTCTGGTCCTGAATCTCTGTAAGCTGACTTGCTTGCAGGGGAATGACACTGTGTACATAATA-TAGCACCACCTGGGTCTTCCAAGATTTGGTCTCCACCATCACCTCACCACGACCCAGTCCCACCTGCCCACAAACAGTTTGAAAGTTTCCTCTTTTCAGCTTTCCTCCTTCCAAACTTAAGCTTCCATATGTACAATATAGCTC-TTTcctacttaaagaaaaataaattcagagtGATCCTCCTAAAGTTGTGAAATAAAATCTGTCTGTAGTTTTTCCCTCTGTCCTCCTTAGAGTCCTCCTGG--TCAGGCTCCCAGGACCTCCAACATCTGAAATTTGTGCCTTTCTTTGAC i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15061514 991 - 90373283 AGG-TTATTGACATTGTGACAACAAGGATAATACGGATTAAGTCAGCAAACCACAAAGATTTTCCAGTGTGCCTAATGTCTAAAATTCTAATTTAGTTATCATTTAGTAG-TTCCATTAAATAATTTTCTATACAGGTAATCATATATTCAATTTCTTTTCCAATATAGGCAATTTTACACTCAGAGAGTTGAAACTAATAAAACCTAGGGAAGGAATATCTAAATTATAAACCATTCTTTTACAGATTCCATGATTAACCC-TGCAAACATTAAGAC--CAACCTCCAAACACAGACTACATAAAAATTATTTAtaatttgcaggtgttagtggcttaatacagcatatattctccatcagcttttgcattttaaaagaaaaattacagaca------------aaaatctta---atgcaaagtaataaACTACTAATCA--TAAAATTCTCTCCTATATTCTTTCAGAACACAATGAAAGGAAATTATTTGCTTTTTATGAGAAACTGATATATTTTCTGTCCATAGATGATGAAAATGACGTTCTCTGACCACCAAGAAATGTATAATCAAATTTGCAGACCACTTTTAA-TTTTTTT-TTAAATTCTGGGTCTG---TATTTTTCACGTTCCTGACCTCCTACTATAATTTA-------------------------------TTTTTTCTCTGGTCCTGAATCTCTGTAAGCTGACTTGCTCGCAGGGGAATGACACTGTGTACATAATA-CAGCACCACCTGGGTCTTCCAAGATTTGGTCTCCACCATCACCTGACCACGACCCAGTCCCACCTGCCCACAAACAGTTTGAAAGTTTCCTCTTTTCAGCTTTCCTCCTTCCAAACTTAAGCTTCCATATGTACAATATAGCTC-TTTCCTACTTAAAGAAAAATAAATTCAGAGTGATCCTCCTAAAGTTGTGAAATAAAATCTGTCTGTAGTTTTTCCCTCTGTCCTCCTTAGAGTCCTCCTGG--GCAGGCTCCCAGGACCTCCAATATCTGAAATTTGTGCCTTTATTTGAC i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21969009 987 + 50472720 GGGTTTATTGACATTGGGACAACATGAATAATATGGATTAAGTCAGCAAACCATC---ATGTTCCAGTGTGCCTAATGTCTAAGGTTACAATTTAGTTATCATTTAATAG-TTCCATTAAATAATTTTCTATACAGGCAATCACATATTCCATTTATTTTCTAATATAGGCAATTTTAAACTCAGAGAGTTGGAACTAATAAAACCTGGGGAAGGGAAATTTAAATTATAAACCATTCTGTTACAGATTCCATGATTAACCCTTGAAAAAATTATACC--CAACCTCCAAACACAGACtatataaaaattatttataatttaCAGATATTCATGGCTTAAAATAGCATATATTCTC---AAGTTTTTGCATTTTAAAAGAAAAATTAACGATA------------CAGATCTTA---ATGCAAAGTAATAAGGTACTAATCA--TAAAATTCTCTCCTCt-ttcttttagaacacaatgaaaggaaattatttgctccttatgagaaactgatatactttctctctgtagataatgaaagtaacttgctttgactactgagaaatatatagtcaaatttatagaccatctttaa-tattttttttagatcctgggtcta---tattttttgtgttcctgatctccaactataattta------------------------------tttttttctctgcttctgaATCTCTGTAAACTGACTTGCTTTCAGGGAAATAACACTGTGCAT-TAATA-TAGCACAACCTGCATCTTCCAAGATTTGGTCTCCACTATCACCTCACCACCACCCAGTCACACCTGCCCACAAACACTTTGGAAGTGTCCTCTTTTCAGCTTTCCTCCTTCCAAACTTAAGCTTCTATATGTATCATATAGCTC-TCTTCTACTTAAAGAAAAATGAATTCAGAGTGATCCTCATAAAGTTGTGAAATAAGATCAGTCCGTAGTTTTTCCCTCTGTCCTCCTTAGAATCCTCCTGG--TCAGGCTCCCAGGATCCCCAATACGTGAGATTTGTGCCTCTACTCGAC i calJac3.chr21 C 0 C 0 s mm10.chr16 78153164 948 + 98207768 AGGTTTATTA--------GCAGCATGGATCATAAACACTAAGTTGAT-AGCCATAAACACCTTTCAGGGTGCCCAGGATCTAAATATACAATTTAGTTGTCATTTAGTGGTTTCTATTAAATAACCTTCTACAGTAGTAA-CACATGCCCATTTTGTTCTTCAGAATAG------TTAAATTCACGTAACTAGAGCTAGTAAAAGCTGATGAAGAGATATTT--ACTATAAACCATCCTTTAACTGGTTCTACAATGCAGTCCTGACAGTATTAACTCCTCACCCTACTAAT---GGCTATGAGAAAGTTACT----ATTTGTGAGTAATAGTGAGTCGGTGTAGCATGTGACCTCCTTGGGAGTTTGCATTTTAAAGGAAACACTGAGGTTAATGTTAGGTAATAAACTATTAATCATGTTAGGTAATAAACTATTAATCAATCATGACTCTCTCATGGATTCCTGGA-AACATAGTAAAAGTAAATTGCTT---CTCAAACAGGCACTGATATAATTTCTCTATACACATGAC--AAATAATTGACTTTTACTACAAAAAATCATAGAGCTAAATTTGCAGATATCTT---A-TTTCTCC---AGCCATTGGACATATCTTACTGTTCCCATTTCTGAAGT---GTTATAATTCATGTtttggtttggtttggtttggGTTTTTTTTTTTTTTTATGATCCTGAATCTGTGAAAGTTTATTT-CTCTCAGGG-----------------TAATT-GAGCCTCA------TTTTCTAAAGTCTTGACATCACAATCCCACCTCC----CCTAGCCTAAC--ACCCACCAACAGTTTGGAAGTTTCATCTTTCCACATTT----------------AACTTTGATGGGTGTAATTTACTTC-TCTCTTACttaaat-aaaattaatttaaaatGATACCCATAAAAGTGTGTAATAAA------------TGTTTCCCTCTGACTTTCGGAGGGGCTCTGTGT--TCTGGCTTGCAGAACCTCC-CTGGCTGGGTTTTGTACATTTACTTAGC i mm10.chr16 I 325 C 0 s canFam3.chr31 13854858 904 + 39895921 --------GGATTTTTTGACAACATGAATCCTATGGGTTTAGCCAGC-AACCATAAAGATATTGCAGTATGCCTAATACCTAAAATTGCAATCTACCTATCATTTAGTAG-CTTCATTAAATAATTTTCTATATAGGTAATTATATGTTCCTTTTCTTTTCCAATGTAGGTAAACTTGAACTCAAAGAATTGGAA-TAAGTAGGTCTGTGGAGGGGAAATCTAAATTATAAGTCATT-TTTTACTGATTCCATGAATCACCCTTGCCA-----AAGCC--TATCTTCCCACTACAGGACATGAGAAAATTATTTGTAATTTTCAGGCATTAGTGATTTTATATAGCATATACTCTTCTTGGGTGTTTGCATTTTAAAAGA-------------------------AGGATTGTG--------------------------------------------------TCTTAGAACACAAT--AAGAAAACTAtttgcttctcctgagagactggtagggtttc--tccatggataatgaaaattatttgcttcaaatagcaagatatatagggcgaaatttacagaccacctttat-taacttttgcagatcttaggccta---tgtatttcccattcttgatcttgtattacaattga-------------------------------tattttctctggtcctgaatttttaTAAGCTGCCTTGCTTTCTAGGGAATAAAGCTACGTGTGCAATACCAGCATTACTTGTGTCTTCCAGGAT-TGGTCCCCACCATCA-----------CCCAAGCCCACAAGCCCACATACTGTGTGAAAGTGTCCTTGTTTCAGCTCTCCATTTTCCATACTTAAGCTTCCATATATGTAATATTGTTCATCTCCTACTTAAAGAAAAGTTAATTGAGAATGA--CTCCTAAAATTGTGAAGGAAGATCGATCTGT--TCTTTACCTCTATCCTCCTCAGAGTCTTCCCGGTATTAGGCTTCCAAGACCCCTGCCATACAGACCTTGAACCTCTACTCAGC i canFam3.chr31 C 0 I 138 a score=10208714.000000 s hg38.chr21_KI270874v1_alt 124182 2781 + 166743 CCTTG---------GCATCGA------------ACCAAGCC-----------------AAATTCCTCTTCAGATGTAGAT---------------------GGGCAATGTT-------------------------------------------------------------------------TTCTAATTTACACAGGGCTTGTA-CCTTACCCCATTTACTCAAATAAATA-------------------------ATA-----ACACTTAAATTTT---------CTACATTACATGCACACGTTTCTC-AAAAAAATTATCTACGGAATTTATCTTAATTGTATTTATTTTAAATATTTCTGGGAAAGCATTCCTAGGGAAGACTTCTTAGTTCCATTTATTGTCAAAGAGGAAATGGAGTGGGGCCTTTTATTT---------------TTTGTGTGTGTTAAATATAGAGTATTAATTGGTATAAATATTCCGGGTAGAAT--------TTCTAAATAAATTCAAAACATGCTT----TG-TTTTTAGAAAAGA-----------TACATATTAATGCCCTAAACCTAAACTAAAACTAAACCAGATGAAATGCTGTGTCTTAACGCAAGTCAGGCACCATTTACTTGCCTCCCAAAGTTTCCAGTCAATCTACCTTCAAGTTGCACAGTGCTTTCCATTCAGCAGGAATGGCTGCTGTTCTAAATGCTGAAGATTTTTATTTTCTCATTTATATCCTTTTAACAAGTAATTAATGGGTTTAAATACCTTCCTGCATGATTACAATTTTCTCTTATTAGCTTTTAGCTGTGTGTGATATTCAACATCCATTCCTCTTTGTTTTTAGAAAGTACTTTTTAAAAATCTGAAGTTTAAACACAGGGTAT-AAAATTTCTATTTGTTTTATATTTCCATAACATCAAATAATAATCTCTCTAAACTTATATTTTGAAATACAAAATACTTCCTTCTTCCTCTGGATCAA--CAAAATGGGTTTAATTAATCTTATGCCCTTATTTAAGGTTTTAGGAAATAA----TAATCGCCATTCTTTAGCAGGC-AAAAATT---ATGGATACAGTAGTTACAATAAATTAACTCAAATGATCTCACAAATGAAAAAATTTTCCCGGTTAAGAGTGTAAAAACTCTACTGTCCTAAATTGTCTCCCAGTCACACTACT-GTTACTTAAACAACATATCTCAGTAAAAGTACAGACGTCATTTCACATTTGT-CAACTCACTAATTTAATAACCACATGAAAAGGCAATAGAATTATAAAACATGTCAT-TTTTCC--AATACTCTAATGAAATTTTT------------CATGTATATGAAAATTCACTTACTTGATTATGCATTTTCATTACTATTACTTTGAAAATTTATCAAAACAAAAGGAGTTGTATCGTAG-----------------CC-AAAAAGACTTTT--TAAA---TATAAAATTTGGTCTAAGT----AAGATAATATTTTATAATAACATGAA-CTACGAAACTACAAC-------TATATATATGAAAAAATATTGATTTTGGTAAAAACTTTCCAGCTTGATCCAAAAAATTTTTTATTTTTAAAACAATCTATATCT----AGTTACTTATCAACTGATT---TCCAGTTGTTCAA--CTGACTATAAACTGCTTTTTGTTTACAAAAATAAATTATGGTAACAATTTAAG------TACTAAAATA--TTTGAGGTTTTTCTTTAAGGTTAATGTAAATTTAGTGCTGACATTTTAAAAATTACTATTAAGATGGCCATTGATTACAATGATTAGTGAATATAATCAAAATCATGAAACCAAATTAT--TTAAGTGGACAAGCTGCTGAA---G----CAATCATATTCATTTAGAGGTGAGAAAGTGC----AAGTTGTCTTTTTAACTGAAATCACAGTAAAATCAAGAA-AAAAAAG-AAACTCCCATTCACATTCTAAGTAAAATTACATGACCAAAAAAAGTTATTTGCATATATAAAAATGCTTTCAAACTAAGGTGGATGTGTGCATAGAAATCCCTATGAAGAACCCAGATTTTGTTTCTGGGAAAAGTTAGCACATTCTCCTGGCAAATCTTTCAGAGTCTATCATTA---AATTACCAGCTATAGAGAAGGCTTTTACCAAGATAGCTAAATTTCTAGTTGATAACTTTAAGATTTGTTTAAAAAAATAACTTCAGTATTGCAAATAATAAGAATTAATTTTTCTTTCTACAGACTAAAAGGTTTTGT-----TATACTCCCAAATCTGTGCCATCTTCTGCCTGACACAC-TAT--TTAGAGCTGCTCTTTTGTGTTAGTTGTTTTTCAAACTTCACTAGATGATCTCAGGAACCTCTAGGGATTTAAATCATCATGAACAAATGATAGCGTCAGACTGATACGCTATTAAAGCAAAAGATAACTTACATTCGTAACACTAGTTATAAATAATAATAGGACATTAGAGAGTTTTATTAGAAGAAA-AATTGCCTG--AAAAACTTCCTCCTATTAGGTTAACCTTCTAGAATTTCTCAAACAAACCAAATTATTTCTGCAAAATCAAAGTCAATACCTGAGTCTGTTTATAAAAATCACCAATTCACAATGCAACTATTTTTTTC-TTTTCATTTAACATTTTTAAATGATT-TCTTGTCTTCTTTTGTG-TTTTAGCTGAA-TTTGTGTGCAG--CACATTGTTGCTCCAGCTTAAAAACCTCCTGTGTGGTA-AATGCTT-GGCAGCCCTGGGGAAGGCAATGAACACGGTGAAATTCA--GTGCAG--TG----TGGTAAGACAAGGAGAGCATGAATAATATTTGGAGATCTAGCACACCTTAGTGGAAACAATTATTATTACAACTGCTTTGAAGACATTTGAATTTTAAACTCCATTGTTT--GTGAAATTCTATTTTGACTAAATAGAGGGAC-TTTGTTCAGGCTTTTGTTGTCTTTAGCATGATGTGTTTCTTTCC-TAAACTCCACACAG----------ATAAGAA---GATAAATTTGATCATGAATTTCTAAAAGTAGAAATCATAGGTT--TTTT-AG s panTro4.chr21 3738120 2784 + 32799110 CCTTG---------GCATCGA------------ACCAAGCC-----------------AAATTCCTCTTCAGATGCAGAC---------------------GGGCCATGTT-------------------------------------------------------------------------TTCTAATTTACACAGGGCTTGTA-CCTTACCCCATTTACTCAAATAAATA-------------------------ATA-----ACACTGAAATTTT---------CTACATTACATGCACATGTTTCTC-AAAAAAATTATCTACAGAATTTATCTTAATTGTATTTATTTTAAATATTTCTGGGAAAGCATTCCTAGGGAAGACTTCTTAGTTCCATTTATTGTCAAAGAGGAAATGGAGTGGGGCCTTTTATTT---------------TTTGTGTGTGTTAAATATAGAGTATTAATTGGTCTAAATATTCTGGGTAGAGT--------TTCTAAATAAATTCAAAACATGCTT----TG-TTTTTAGAAAAGA-----------TACATATTAATGCCCTAAACCTAAACTAAAACTAAACCAGATGAAATGCTGTGTCTTAATGCAAGTCAGGCACCATTGACTTGCCTCCCAAAGTTTCCAGTCAATCTACCTTCAAGTTGCACAGTGCTTTCCATTCAGCAGGAATGGCTGCTGTTCTAAATGCTGAAGATTTTTATTTTGTCATTTGTATCCTTTTAACAAGTAATTAATGGGTTTAAATACCTTCCTGCATGATTACAATTTTCTCTCATTAGGTTTTAGCTGTGTGTGATATTCAACATCCATTCCTCTTTGTTTTTAGAAAGTACTTTTTAAAAATCTGAAGTTTAAACACAGGGTAT-AAAATTTCTATTTGTTTTATATTTCCATAACATCAAATAATAATCTCTCTAAACTTGTATTTTGAAATACAAAATACTTCCTTCTTCCTCTAGATCAA--CAAAATGGGTTTAATTAATCTTATGCCCTTATTTAAGGTTTTAGGAAATGA----TAATCGCCATTCTTTAGCAGGC-AAAAATT---ATGGATACAGTAGTTACAATAAATGAACTCAAATGATCTCACAAATGAAAAAATTTTCCCGGTTAAGAGTGTAAAAACTCTACTGTCCTAAATTGTCTCCCAGTCACACTACT-GTTACTTAAACAACATATCTCAGTAAAAGTACAGATGTCATTTCACATTTGT-CAACTCACTAATTTAATAACCACATGAAAAGGCAATAGAATTATAAAACATGTCAT-TTTTCC--AATACTCTAATGAAATTTTT------------CATGTATATGAAAATTCACTTACTTGATTATGCATTTTCATTACTATTACTTTGAAAATTTATCAAAACAAAAGGAGTTGTATCGTAG-----------------CC-AAAAAGACTTTT--TAAA---TATAAAATTTGGTCTAAGT----AAGATAATATTTTATAATAACATGAA-CTACGAAACTACAAC-------TCTATATATGAAAAAATATTGATTTTGGTAAAAACTTTCCAGTTTGATCCaaaaaatattttatttttaaaaCAATCTATATCT----AGTTACTTATCAACTGATTATAGTCAGTTGTTCAA--CTGACTATAAACTGCTTTTTGTTTACAAAAATAAATTATGGTAACAATTTAAG------TACTATCATA--TTTGAGGTTTTTCTTTAAGGTTAATGTAAATTTAGTGCTGACATTTTAAAAATTACTATTAAGATGGCCATTGATTACAATGATTAGTGAATATAATCAAAATCATGAAACCAAATTAT--TTAAGTGGACAAGCTGCTGAA---G----CAATCATATTCATTTAGAGGTGAGAAAGTGC----AAGTTGTCTTTTTAACTGAAATCACAGTAAAATCAAGAA-AAAAAAG-AAACTCCCATTCACATTCTAAGTAAAATTACATGACCAAAAAAAGTTATTTGCATATATAAAAATGCTTTCAAACTAAGGTGGATGTGTGCATAGAAATCCCTATGAAGAACCCAGATTTTGTTTCTGGGAAAAGTTAGCACATTCTCCTGGGAAATCTTTCAGAGTCTATCATTA---AATTACCAGCTATAGAGAAGGCTTTTAGCAAGATAGCTAAATTTCTAGTTGATAACTTTAAGATTTGTTTAAAAAAATAACTTCAGTACTGCAAATAATAAGAATTAATTTTTCTTTCTACAGACTAAAAGGTTTTGT-----TATACTCCCAAATCTGTGCCATCTTCTGCCTGACACAC-TAT--TTAGAGCTGCTCTTTTGTGTTAGTTGTTTTCCAAACTTCACTAGATGATCTCAGGAACCTCTAGGGATTTAAATCATCATGAACAAATGATAGCATCAGACTGATATGCTATTAAAGCAAAAGATAACTTACATTCGTAACACTAGTTATAAATAATAATAGGACATTAGAGAGTTTTATTAGAAGAAA-AATTGCCTG--AAAAACTTCCTCCTATTAGGTTAACCTTCTAGAATTTCTCAAGCAAACCAAATTATTTCTGCAAAATCAAAGTCAATACCTGAGTCTGTTTATAAAAATCACCAATTCACAATGCAACTATTTTTTTC-TTTTCATTTAACATTTTTAAATGATT-TCTTGTCTTCTTTTGTG-TTTCAGCTGAA-TTTGTGTGCGG--CACATTGTTGCTCCAGCTTAAAAACCTCCTGTGTGGTA-AGAGCTT-GGCAGCCCTGGGGAAGGCAATGAACACGGTGAAATTCA--GTGCAG--TG----TGGTAAGACAAGGAGAGCATGAATAATATTTGGAGATCTAGCACACCTTAGTGGAAACAATTATTATTACAACTGCTTTGAAGACATTTGAATTTTAAATTCCATTGTTT--GTGAAATTCTATTTTGACTAAATAGAGGGAC-TTTGTTCAGGCTTTTGTTTTCTTTAGCTTGATGTGTTCCTTTCC-TAAACTCCCCACAG----------ATAAGAA---GATAAATTTGATCATGAATTTCTAAAAGTAGAAATCATAGTTT--TTTT-AG i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 17001235 2784 + 48394510 CCTTG---------GCATTGA------------ACCAAGCC-----------------AAATTCCTCTTCAAATGCAGAC---------------------GGACAATGTT-------------------------------------------------------------------------TTCTAATTTACAGAGGGCTTGTA-CCTTACCCCATTTACTCAAATAAATA-------------------------ATA-----ACACTTAAATTTT---------CTACATTACGTGCACATGTTTCTC-AAAAAAATTGTCTATGGaatttatattaattgtatttattttaaatatttCTGGGAAAGCATTCCTAGGGAACACTTCTTAGTTCCATTTATTGTCAAAGAGGAAATGGAGTGGGGCCTTTTATTTTG-------------TGTGTGTGTGTTAAATATAGAGTATTAATTGATCTAAATATTCCAGGTAGAAT--------TTCTAAATAAATTCAAAACATGCTT----TG-TTTTTAGAAAAGA-----------TACATATTAATGCCCTAAACCTAAACTAAAATGAAACCAGATGAAATGCTGTGTCTTAATGCAAGTCAGGCACCATTGACTTGCCTCCCAAAGTTTCCAGTCAATCTACCTTCAAGCTGCACAGTGCTTTCCATTCAGCAGGAATGGCTGCTGTTCTAAATGCTGAAGATTTTTATTTTGTCATTTGTATCCTTTTAACAAGTAATTAATGGGTTTAAATACCTTCCTGCATGACTACAATTTTCTCTTATTAGCTTTTAGCTGTGTGCGATATTCAACATCCATTCCTCTTTGTTTTTAGAAAGTACTTTTTAAAAATCTGAAGTTTAAACAAATGGTAG-AAAATTTCTATTTGTTTTATATTTCCATAACATCAAATAATAAATTCTCTAAACTTGTATTTTGAAATACAAAATACTTCCTTCTTCCTCTAGATCAA--CAAAATTGGTTTAATTAATCTTATGCCCTTATTTAAGGTTTTAGGAAATGA----TAATCACCATTCTTTAGCAGGC-AAAAATT---ATGGGTACAATAGTTACAATAAGTTAACTCAAATGATCTCACAAATGAAAAAATTTTCCCGGTTAAGAGTGTAAAAACTTTACTGTCCTAAATTGTCTCCTAGTTACACTAGT-GTTACTTAAACAACATATCTCAGTAAAAGTACAGATGTCATTTCACATTTTT-CAACTCACTAATTTAATAACCACATGAAAAGGCAATAGAATTATAAAATACATCAT-TTTTCC--AATACTCTAATGAAATTTTT------------CATGTATATGAAAATTCACTTACTTGATTATGCATTTTCATTACCATTACTTTGAAAATTTATCAAAACAAAAGGATTTGTATTGTAG-----------------CC-AAAAAGACTTTT--TAAA---TATAAAATTTGGTCTAAGT----AAGATAATATTTTATAATAACATGAA-CTATGAAGCTACAAC-------TATATATATGAAAAAATATTGATTTTGGTAAAAACTTTTCAGTTTAATCCAAAACATTTTTTATTTTTAAAACAATCTATACCT----AGTTACTTATCAACTGATT---TCAAGTTGTTCAA--CTGACTATGAACTACTTTTTGTTTACAAAAATAAATTATGGTAACAATTTAAG------TACTATCATA--TTTGAAGTTTTTCTTTACGGTTAATGTAAATTTAGTGCTGACATTTTAAAAATTACTATTAAGATGGCCATTGATTACAATGATTAGTGAATATAATCAAAATCATGAAACCAAATTAT--TTAAGTCGACAAGCTGCTGAA---G----CAATCATATTCATTTAGAGGTGAGAAAGTGC----AAGTTGTCTGTTTAACCGAAACCACAGTAAAATCAAGAA-AAAAAAG-AAACTCCCATTCACATTCTAAGTAAAATTACATGACCAAAAAAAGTTATTTGCATATATAAAAATGCTTTCAAACTAAGGTGGATGTGTGCATAGAAATCCCTATGAAGAACCCAGATTTTGTTTATGGGAAAAGTTGGCACATTCTCCTGGCAAATCTTTCAGAGTCTATCATTA---AATTACCAGCTATAGAGAAGGCTTTTAGCAAGATAGCTAAATTTCTAGTTGATAAATTTAAGACTTGTTTAAAAAAATAATTTCAGTACTGCAAATAATAAGAATTAATTTTTCTTTCTACAGACTAAAAGGTTTTGT-----TATACTCCCAAATCTGTGCCATCTTCTGCCTGACACAC-TAT--TTAGAGCTGCTCTTTTGTGTTACTTGTTTTTCAAACTTCACTAGATGATCTCAGGAACCTCTAGGGATTTAAATCATCATGAACAAATGATAGCGTCAGACTGATGTGCTATTAAAGCAAAAGATAACTTACATTCGTAACACTAGTTATAAATAATAATAGAACATTAGAGAGTTTTATTAGAAGAAA-AATTGCCTG--AAAAACTTCCTCCTATTAGGTTAGCCTTCTAGAATTTCTCAAACAAACCAAATTATTTCTGCAAAATCAAAGTCAATACCTGAGTCTGTTTATAAAAATCACCAATTCACTATGCAACTATTTTTTTTATTTTCATTTAACATTTTTAAATGATT-TCTTG---TCTTTTGTG-TTTTAGCTGAA-TTTGTGCATGG--CACATTGTTGCTCCAGCTTAAAAGCCTCCTGTGTGGTA-AGGGCTT-GGCAGCCCTGGGGAAGGCAATGAACATGGTGAAATTCA--GTGCAG--TG----TGGTAAGACAAGGATAGCATGAATAATATTTGGAGATCTAGCACACCTTAGTGGAAACAATTATTATTACAACTGCTTTGAAGACATTTGAATTTTAAATTCCATTGTTT--GTGAAATTCTATTTCGACTAAATAGAGGGAC-TTTGTTCAAGCTTTTGTTTTCTTTAGCTTGATGTGTTTCTTTCC-CAAACTCCCCACAG----------ATAAGAAGATGATAAATTTGATCATGAATTCCTAAAAGTAGAAATCCTAATTT--TTAT-AG i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4498063 2775 + 32716333 CCTTG---------GCATCCA------------ACCAAGCC-----------------AAATTCCTCTTCAAATGCAGAC---------------------GG-CAATGTT-------------------------------------------------------------------------TTCTAATTTACAGAGGGCTTGTA-CCTTACCCCATTTACTCAAATAAATA-------------------------CTA-----ACACTTAAATTTT---------CTACACTACATGCACATGTTCCTC-AAAAAAATTATCTATGGAATTTATATTAATTGTATTTATTTTAAATATTTCTGGGAAAGCATTCCTAGGGAACACTTCTTAGTTCCATTTATTGTCAAAGAGGAAATGGAGTGGGGCCTTTTATTT---------------TGTGTGTGTGTTAAATATAGAGTATTAATTGGTCTAAATATTCCGGGTAGAAT--------TTCTAAATAAATTCAAAATATGTTT----TC-TTTTTAGAAAAGA-----------TACATATTAATGGCCTAAACCTAAACTAAAACTAAACCAGATGAAATCCTGTATCTTAATGCAAGTCAGGCACCATTGACTTGCCTCCCAAAGTTTCCAGTCAATCTACCTTCAAGTTGCACAGTGCTTTCCATTCAGCAGGAATGGCTGCTGTTCTAAATGCCGAAGATTTTTATTTTGTCATTTGTGTCCTTTTAACAAGTAATTAATGGGTTTAAATACCTTTCTGCATGATTACAGTCTTCTCTTATTAGCTTTTAGCTGTGTGTGATATTCAACATCCATTCCTCTTTGTTTTTAGAGAGTGCTTTTTAAAAATCTGAAGTTTAAACACAGGGTAT-AAAATTTCTATTTGTTTTATATTTCCATAACATCAAATAATAATCTCTCTAAACTTGTATTTTGAAATACAAAATACTTCCTGCTTCCTCTAGATCAA--CAAAATGGGTTTAATTAATCTTATGTCCTTATTTAAGGTTTTAGGAAATGA----TAATCATCATTCTTTAGCAGGC-TAAAATT---ATGGATACAATAATTACAATAAATTAACTCAAATGATCTCACAAATGAAAAAATTTTCCCGGTTAAGAGTGTAAAAACTTTACTGTCCTAAATTGCCTCCTAGTTACACTACC-GTTACTTAAACAACATATCTCAGTAAAAGTACAGACGTCATTTCACATTTGT-CAACTCACTAATTTAATAACCACATGAAAAGGCAATAGAATTATAAAACATGTCAT-TTTTCC--AATACTCTAATGAAATTTTT------------CATGTATATGAAAATTCACTTACTTGATTATGCATTTTCATTACTACTACTTTGAAAATTTATCAAAACAAAAGGAGTTGTATCGTAG-----------------CCAAAAAAGACTTTT--TAAA---TATAAAATTTGGTCTAAGT----AAGATAATATTTTATAATAACATGAA-CCATGAAACTACAGC-------TATATATATTTAAAAATATTGATTTTGGTAAAAACTTTTCAGTTTAATCCAAAAAATTTTTTATTTTTAAAACAATCTATACCT----AGTTACTTATCAACTGATT---TTTAGTTGTTCAA--CTGACTATAAACTACTTTTTGTTTACAAAAATAAATTATGGTAACAATTTAAG------TGTTATCATA--TTTGAGGTTTTTCTTTAAGGTTAATGTAAATTTAGTGCTGACATTTTAAAAATTACTATTAAGATGGCCATTGATTACAATGATTAGTGAATATAATCAAAATCATGAAACCAAATTAT--TTAAGTCGACAAGCTGCTGAA---G----CAAT-ATATTCATTTAGAGGTGAGAAAGTGC----AAGTTGTCTTTTTAACTGAAACCACAGTAAAATCAAGAA-AAAAAAG-AAACTCCCATTCACATTCTGAGTAAAATTACATGA-CAAAAAAATTTATTTGCATATATAAAAATGCTTTCAAACTAAGGTGGATGTGTGCATAGAAATCCCTGCAAAGAACCCAGATTTTGTTTATGGGAAAAGTTGGCGCATTCTCCTGGCAAATCTTTCAGAGTCTATCATTA---AATTACCAGCTATAGAGAAGGCTTTTAGCAAGATAGCTAAATTTCTAGTTGATAACTTTAAGACTTCTTTAAAAAAATAATTTCAGTACTGCAAATAATACGAATTAATTTTTCTTTCTACAGACTAAAAGGTTTTGT-----TATACTTCCAAATCTGTGCCACCTTCTGCCTGACACAC-TAT--TTAGAGCTGCTCTTTTGTGTTAGTTGTTTTTCAAACTTCACTAGATGATTTCAGAAACCTCTAGGGATTTAAATCATCATGAACAAATGATAGCGTCAGACTGATATGCTATTAAAGCAAAAGATAACTTACATTCGTAACACTAGTTATAAATAATAATAGGACATTAGAGAGTTTTATTAGAAGAAA-AATGGCCTG--AAAAACT---TCATATTAGGTTAACCTTCTAGAATTTCTCAAACAAACCAAATTATTTCGGCAAAATCAAAGTCAATACCTGAGTCTGTTTATAAAAATCACCAATTCACAATTC-ACTATTTTTTTC-TTTTCATTTAACATTTTTAAATGATT-TCCTGTCTTCTTTCGTG-TTTTAGCTGAA-TTTGTGTGCGG--CACATTGTTGCTCCAGCTTAAAAACCTCCTGTGTGGTA-AGGGCTT-GGCAGTCCTGGGGAAGGCAGTGAACATGGTGAAATTCA--GTGCAG--TG----TGGTAAGACAAGGAGAGCATGAATAATATTTGGAGATCTAGCACACCTTAGTGGAAACAATTATTATTACAACTGCTTTGAAGACATTTGAATTTTAAATTCTATTGTTT--GTGAAATTCTGTTTCGACTAAATAGAGGGAC-TTTGTTCAGGCTTTTGTTTTCTTTAGCTTGATGTGTTTCTTTCC-CAAACTCCCCACAG----------ATAAGAA---GATAAATTTGACCATGAATTTTTAAAAGTAGAAATCATAATTT--TTTT-AG i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168614218 2792 - 198365852 CCTTG---------GCATCAA------------ACCAAGCC-----------------AAATTCCTCTTCAAATGCAGAT-----------------------GCAGTGTT-------------------------------------------------------------------------TTCTAATTTACAGAGGGCTTGTA-TCTTACCCCGTTTACTCAAATAAATA-------------------------ATA-----ACACTTAAATTTT---------TTACATTACATGCACATGTTTCTCAAAAAAAATTATCTATGGaatttatattaattgtatttattttaaatatttCTGGGAAAGCATTCCTAAGGAGCACTTCTTAGTTTCATTTATTGTCAAAGAGGAAATGGAGTGGGGCCTTTTAATTTT-------------TGCGTGTGTGTTAAATACAGAGTATTAATTGGTTTAAATATTCCAGGTTGAATTTCCACACTTCTAGATAAATTCTAAACATGCTT----TG-TTTTTAGAAAAGA-----------CACATATTAATGCCCTAAACCTAAACTAAAACTAAACCAGATGAAATGCTGTGTCTTAATGCAAGTCAGGCACCATTGACTTGTCTCCCAAAGTTTCCAGTCAGTCTACCTTCCAGTTGCACAGTGCTTTCCATTCAGCAGAAATGGCTGGTGTTCTAAATGCTGAAGACTTTTATTTTGTCATTTGTATCCTTTTAACAAGTAATTAATGTGTTTAAATACCTTCCTGCATGATTACATTTTTCTCGTATTAGCTTTTAGCTGTGTGTGATATTCAACATTGTTTCCTCTTTGTCTTTAGAAAGTACTTTTTAAAAATCTGAAGTTTAAACATAGGGTAT-AAAATTTCTATTTGTTTTATAGTTCTATAACGTCAAATAATAATCTCTCTAAACTTGTATTTTGAAATACAAAATACTTCCTTCTTCCTCTAAATCAA--CAAAATGGGTTTAATTAATCTTATGCTGTTATTTAAGGTTTTAGGAAATAATAATTAATCACCATTCTTTAGCAGACAAAAAATT---ATGGATACAACAGTTACAATAAATTAACTCAAATGATCTCACAAATGAAAAAATTTTCCTGGTTAGGAGTGTAAAAACTTTACTGTCCTAAATTGTCTCCTAATTACACGA-T-GCTACTTAAACAACATATCTCAGTAAAAGTACAGATGTCATTTCACATTTGT-CAACTCACTGATTTAATAACCACATGAAAAGGCAATAGAATTATAAAACATGTCAT-TTTTCC--AATACTCTAATGAAATTTTT------------CATGTATATGAAAATTCACTTACTTGATTATGCATTTTAATTACTATTATTTTGAAAATATATCAAAACAAAAGGAGTTGTATCATAG-----------------CC-AAAAAGATTTTT--TAAA---TGTAAAATTTGGTCTAAGT----AAGATAATGTTTTATAATAACATAAA-CTATGAAACTACAAC-------TACATATACGAAAACATATTGATTTTGGTAAAAACTTTTCAGATTAATCCAAAAAATTTTTCATTTCTAAAACAATCTATACCT----AGTTACTTATCAACTAATT---TCCAGTTGTTCAA--CTGACTATGAACTACTTTTTGTTTACAAAAATAAATTATGGTAACAATTTAAG------TACTGTCATATTTTTTTTTTT----TTTAAGGTTAATGTAAATTTAGTGCTGACATTTTAAAAATTACTATTAAGATGGCCATT-ATTACAATGATTAGTGAATATAATCAAAATCATGAAACCAAATTAT--TTAAGTCAACAAGCCGCTGAA---G----TAATCATATTCATTTAGAGGTGAGAAAGTGC----AAGTTGTCTTTTTAACTGAAACCACAGTAAAATCAAG-A-AAAAAAG-AAACTCCCATTCACATTCTAAGTAAAATTATGTAACCAAAAAAAGCTATTTGCATATATAAAAATGCATTCAAACTAAGGTGGATGTGTGCATAGAAATCCCTATGAAGAACCCAGATTTTGTTTATGGGAAAAGTTGGCACATACTCCTGGCAAATCTTCCAGAGTCTATCATTA---AATTACCAGCTATTGAGAAGGCTTTTAGCAAGATAGCTAAATTTCTAGTTGATAACTTTAAGACTTGTTTAAAAAAATAATTCCAGTACTGCAAATAAAAAGAATTAATTTTTCTTTCTATAGACTAAAAGGTTTTGT-----TATACTTCCAAATCTGTGCCACCTTCTGCCTGACACAC-TAT--TTAGAGCTGCTCTTTTGTGTTAGTTGTTTTTCAAACTTCACTGGATGATCTC-GGAACCTCTAGGGATTTAAATCATCACGAACAAATGACAGAGTCAGACTGATGTACTATTAAAACAAAAGATAACTTACATTTGTAACACTAGTTATAAATAATAATAGGACATTAGAGAGTTTTATTAGAAGAAA-AATTGCCTG--AAAAACTTCCTCCTATTAGGTTAACCTTCTAGAATTTCTCAAACAAACC-AATTATTTCTGCAAAATCAAAGTCAATACCTGCGTCTGTTTAT-AAAATCAACATTTCACAATGCAACTATTTTTTTC-TTTTCATTTAACATTTTTAAATGATC-TCTTGTCTTCTTTTGTG-TTTTAGCTGAG-TTTGTGTGCGGCACACATTGTTGCTTCAGCTTAAAAACCCCCTGTGTGGTA-AGGGCTTGGGCAGCCCTGGGGAAGGCAATGAACATGGTGAAATTCA--GTACAG--TG----TGGTAAGACAAGGAGAGCATGAATAATATTTGGAGATCTAGCACACCTTAGTGGAAACAATCATTATTACAACTGCTTTGAAGACATTTGAATTTTAAATTCCATTGTTT--GTGAAATTCTATCTCGGCTAAATAGAGGGACTTTTGTTCAGGCTTTTGTTTTCTTTAGCATAATGTGTTTCTTTCC-CAAACTCCCCACAG----------ATAAGAA---GATAAAATTGATCATGAATTTCTAAAAGTAGAAATCATAATTT--TTTGGGG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162277821 2792 - 192294377 CCTTG---------GCATCAA------------ACCAAGCC-----------------AAATTCCTCTTCAAATGCAGAT-----------------------GCAGTGTT-------------------------------------------------------------------------TTCTAATTTACAGAGGGCTTGTA-TCTTACCCCGTTTACTCAAATAAATA-------------------------ATA-----ACACTTAAATTTT---------TTACATTACATGCACATGTTTCTCAAAAAAAATTATCTATGGAATTTATATTAATCGTATTTATTTTAAATATTTCTGGGAAAGCATTCCTAAGGAGCACTTCTTAGTTTCATTTATTGTCAAAGAGGAAATGGAGTGGGGCCTTTTAATTTT-------------TGCGTGTGTGTTAAATACAGAGTATTAATTGGTCTAAATATTCCAGGTTGAATTTCCACACTTCTAGATCAATTCTAAACATGCTT----TG-TTTTTAGAAAAGA-----------CACATATTAATGCCCTAAACCTAAACTAAAACTAAACCAGATGAAATGCTGTGTCTTAATGCAAGTCAGGCACCATTGACTTGTCTCCCAAAGTTTCCAGTCAGTCTACCTTCCAGTTGCACAGTGCTTTCCATTCAGCAGAAATGGCTGCTGTTCTAAATGCTGAAGACTTTTATTTTGTCATTTGTATCCTTTTAACAAGTAATTAATGTGTGTAAATACCTTCCTGCATGATTACATTTTTCTCGTATTAGCTTTTAGCTGTGTGTGATATTCAACATTGATTCCTCTTTGTCTTTAGAAAGTACTTTTTAAAAATCTGAAGTTTAAACATAGGGTAT-AAAATTTCTATTTGTTTTATAGTTCTATAACGTCAAATAATAATCTCTCTAAACTTGTATTTTGAAATACAAAATACTTCCTTCTTCCTCTAAATCAA--CAAAATGGGTTTAATTAATCTTATGCTGTTATTTAAGGTTTTAGGAAATAATAATTAATCACCATTCTTTAGCAGACAAAAAATT---ATGGATACAACAGTTACAATAAATTAACTCAAATGATCTCACAAATGAAAAAATTTTCCTGGTTAGGAGTGTAAAAACTTTACTGTCCTAAATTGTCTCCTAATTACACGA-T-GCTACTTAAACAACATATCTCAGTAAAAGTACAGATGTCATTTAACATTTGT-CAACTCACTGATTTAATAACCACATGAAAAGGCAATAGAATTATAAAACATGTCAT-TTTTCC--AATACTCTAATGAAATTTTT------------CATGTATATGAAAATTCACTTACTTGATTATGCATTTTAATTACTATTATTTTGAAAATATATCAAAACAAAAGGAGTTGTATCATAG-----------------CC-AAAAAGATTTTT--TAAA---TGTAAAATTTGGTCTAAGT----AAGATAATGTTTTATAATAACATAAA-CTATGAAACTACAAC-------TACATATACGAAAACATATTGATTTTGGTAAAAACTTTTCAGATTAATCCAAAAAATTTTTCATTTCTAAAACAATCTATACCT----AGTTACTTATCAACTAATT---TCCAGTTGTTCAA--CTGACTATGAACTACTTTTTGTTTACAAAAATAAATTATGGTAACAATGTAAG------TACTGTCATA--TTTGAGGCT----TTTAAGGTTAATGTAAATTTAGTGCTGACATTTTAAAAATTACTATTAAGATGGCCATTGATTACAATGATTAGTGAATATAATCAAAATCATGAAACCAAATTAT--TTAAGTCAACAAGCCGCTGAA---G----TAATCATATTCATTTAGAGGTGAGAAAGTGC----AAGTTGTCTTTTTAACTGAAACCACAGTAAAATCAAG-A-AAAAAAG-AAACTCCCATTCACATTCTAAGTAAAATTATGTAACCAAAAAAAGTTATTTGCATATATAAAAATGCATTCAAACTAAGGTGGATGTGTGCATAGAAATCCCTATGAAGAACCCAGATTTTGTTTATGGGAAAAGTTGGCACATACTCCTGGCAAATCTTCCAGAGTCTATCATTA---AATTACCAGCTATTGAGAAGGCTTTTAGCAAGATAGCTAAATTTCTAGTTGATAACTTTAAGACTTGTTTAAAAAAATAATTCCAGTACTGCAAATAAAAAGAATTAATTTTTCTTTCTACAGACTAAAAGGTTTTGT-----TATACTTCCAAATCTGTGCCACCTTCTGCCTGACACAC-TAT--TTAGAGCTGCTCTTTTGTGTTAGTTGTTTTTCAAACTTCACTGGATGATCTC-GGAACCTCTAGGGATTTAAATCATCACGAACAAATGACAGAGTCAGACTGATGTACTATTAAAACAAAAGATAACTTACATTTGTAACACTAGTTATAAATAATAATAGGACATTAGAGAGTTTTATTAGAAGAAA-AATTGCCTG--AAAAACTTCCTCCTATTAGGTTAACCTTCTAGAATTTCTCAAACAAACCGAATTATTTCTGCAAAATCAAAGTCAATACCTGCGTCTGTTTAT-AAAATCAACATTTCACAATGCAACTATTTTTTTC-TTTTCATTTAACATTTTTAAATGATC-TCTTGTCTTCTTTTGTG-TTTTAGCTGAG-TTTGTGTGCGGCACACATTGTTGCTTCAGCTTAAAAACCCCCTGTGTGGTA-AGGGCTTGGGCAGCCCTGGGGAAGGCAATGAACATGGTGAAATTCA--GTACAG--TG----TGGTAAGACAAGGAGAGCATGAATAATATTTGGAGATCTAGCACACCTTAGTGGAAACAATCATTATTACAACTGCTTTGAAGACATTTGAATTTTAAATTCCATTGTTT--GTGAAATTCTATCTCGGCTAAATAGAGGGACTTTTGTTCAGGCTTTTGTTTTCTTTAGCATAATGTGTTTCTTTCC-CAAACTCCCCACAG----------ATAAGAA---GATAAAATTGATCATGAATTTCTAAAAGTAGAAATCATAATTT--TTTTGGG i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150972909 2791 - 180432695 CCTTG---------GCATCAA------------ACCAAGCC-----------------AAATTCCTCTTCAAATGCAGAT-----------------------GCAGTGTT-------------------------------------------------------------------------TTCGAATTTATAGAGGGCTTGTA-CCTTACCCCGTTTACTCAAATAAATA-------------------------GTA-----ACACTTAAATTTT---------CTACATTACATGCAcatgtttctc-aaaaaaattatctatGGAATTTATATTAAtcgtatttattttaaatatttctgggAAAGCATTCCTAAGGAGCACTTCTTAGTTTCATTTATTGTCAAAGAGGAAATGGAGTGGggccttttaatttt-------------tgtgtgtgtgttaaataCAGAGTATTAATTGGTCTAAATATTCCAGGTAGAATTTCCACACTTCTAGATAAATTCTAAACATgctt----tg-tttttagaaaaga-----------CACATATTAATGCCCTAAACCTAAACTAAAACTAAACCAGACGAAATGCTGTGTCTTAATGCAAGTCAGGCACCATTGACTTGTCTCCCAAAGTTTCCAGTCAGTCTACCTTCCAGTTGCACAGTGCTTTCCATTCAGCAGAAATGGCTGCTGTTCTAAATGCTGAAGacttttattttgtcatttgtatCCTTTTAACAAGTAATTAATGTGTTTAAATACCTTCCTGCATGATTACAGTTTTCTCGTATTAGCTTTTAGCTGTGTGTGATATTCAACATTGATTCCTCTTTGTCTTtagaaagtactttttaaaaatctgaagtttAAACATAGGgtat-aaaatttctatttgttttatagttCTATAACATCAAATAATAATCTCTCTAAActtgtattttgaaatacaaaatacttccttcttcctctaaATCAA--CAAAATGGGTTTAATTAATCTTATGCTGTTATTTAAGGTTTTAGGAAATAATAATTAATCACCATTCTTTAGCAGACAAAAAATT---ATGGATACAACAGTTACAATAAATTAACTCAAATGATctcacaaatgaaaaaattttccTGGTTAGGAGTGTAAAAACTTTACTGTCCTAAATTGTCTCCCAATTACACGACT-GCTACTTAAACAACATATCTCAGTAAAAGTACAGATGTCATTTCACATTTGT-CAACTCACTGATTTAATAACCACATGAAAAGGCAATAGAATTATAAAACATGTCAT-TTTTCC--AATACTCTAATGAAATTTTT------------CATGTATATGAAAATTCACTTACTTGATTATGCattttaattactattattttgaaaatgtatcaaAACAAAAGGAGTTGTATCATag-----------------tc-aaaaagattttt--taaa---tataaaatttggtCTAAGT----Aagataatgttttataataacataaa-ctatgaaactacgac-------tacatatatgaaaaaatattgattttggtaaaaacttttcagattaatccaaaaaatttttcatttctaaaacaatcTATACCT----AGTTACTTATCAACTAATT---TCCAGTTGTTCAA--CTGACTATGAACTactttttgtttacaaaaataaattatggtaacAATTTAAG------TACTGTCATA--TTTGAGGCT----TTTAAGGTTAATGTAAATTTAgtgctgacattttaaaaattactattaagATGGCCATTGATTACAATGATTAGTGAATATAATCAAAATCATGAAACCAAATTAT--TTAAGTCGACAAGCCGCTGAA---G----TAATCATATTCATTTAGAGGTGAGAAAGTGC----AAGTTGTCTTTTTAACTGAAACCAcagtaaaatcaag-a-aaaaaag-aaactcccatTCACATTCTAAGTAAAATTATGTAACCaaaaaaaGttatttgcatatataaaaatgCGTTCAAACTAAGGTGGATGTGTGCATAGAAATCCCTATGAAGAACCCAGATTTTGTTTATGGGAAAAGTTGGCACATACTCCTGGCAAATCTTTCAGAGTCTATCATTA---AATTACCAGCTATTGAGAAGGCTTTTAGCAAGATAGCTAAATTTCTAGTTGATAACTTTAagacttgtttaaaaaaataattccagtactgcaaataaaaagaattaatttttctttctacagACTAAAAGGTTTTGT-----TATACTTCCAAATCTGTGCCACCTTCTGCCTGACACAC-TAT--TTAGAGCTGCTCTTTTGTGTTAGTTGTTTTTCAAACTTCACTGGATGATCTT-GGAACCTCTAGGGATTTAAATCATCACGAACAAATGACAGAGTCAGACTGATGtactattaaaacaaaagataactTACATTTGTAACACtagttataaataataataggaCATTAGAGAGttttattagaagaaa-aattgCCTG--AAAAACTTCCTCCTATTAGGTTAACCTTCTAGAATTTCTCAAACAAACCGAATTATTTCTGCAAAATCAAAGTCAATACCTGCGTCTGTTTAT-AAAATCAACATTGCACAAtgcaactatttttttc-ttttcatttaacatttttaaatgatc-tcttgtcttcttttgtc-ttttagcTGAG-TTTGTGTGCGGCACACATTGTTGCTCCAGCTTAAAAACCCCCTGTGTGGTA-AGGGCTTGGGCAGCCCTGGGGAAGGCAATGAACATGGTGAAATTCA--GTACAG--TG----TGGTAAGACAAGGAGAGCATGAATAATATTTGGAGATCTAGCACACCTTAGTGGAAACAATTATTATTACAACTGCTTTGAggacatttgaattttaaattccaTTGTTT--GTGAAATTCTATCTCGGCTAAATAGAGGGACTTTTGTtcaggcttttgttttctttagcatAATGTGTTTCTTTCC-CAAACTCCCCACAG----------ATAAGAA---GATAAAATTGATCATGAATTTctaaaagtagaaatcataattt--tttt-gG i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15062505 2791 - 90373283 CCTTG---------GCATCAA------------ACCAAGCC-----------------AAATTCCTCTTCAAATGCAGAT---------------------GGGCAGTGTT-------------------------------------------------------------------------TTCTAATTTACACAGGGCTTGTA-GCTTACCCCGTTTACTCAAATAAATA-------------------------ATA-----ACACTTACATTTT---------CTACATTACATGCACATGTTTCTCAAAAAAAATTATCTATGGAATTTATATTAATCGTATTTATTTTAAATATTTCTGGGAAAGCATTCCTAAGGAGCACTTCTTAGTTTCATTTATTGTCAAAGAGGAAATGGAGTGGGGCCTTTTAATTTT-------------TGCGTGTGTGTTAAATACAGAGTATTAATTGGTCTAAATATTCCAGGTAGAATTTCCACACTTCTAGATAAATTCTAAACATGCTT----TG-TTTTTAGAAAAGA-----------CACATATTAATGCCCTAAACCTAAATTTAAACTAAACCAGACGAAATGCTGTGTCTTAATGCAAGTCAGGCACCATTGACTTGCCTCCCAAAGTTTCCAGTCAGTCTACCTTCCAGTTGCACAGTGCTTTCCATTCAGCAGAAATGGCTGCTGTTCTAAATGCTGAAGACTTTTATTTTGTCATTTGTATCCTTTTAACAAGTAATTAATGTGTTTAAATACCTTCCTGCATGATTACAGTTTTCTCATATTAGCTTTTAGCTGTGTGTGATATTCAACATTGATTCCTCTTTGTCTTTAGAAAGTACTTTTTAAAAATCTGAAGTTTAAACATAGGGTAT-AAAATTTCTATTTGTTTTATAGTTATATAACTTCAAATAATAATCTCTCTAAACTTGTATTTTGAAATACAAAATACTTCCTTCTTCCTCTAGATCAA--CAAAATGGGTTTAATTAATCTTATGCTCTTATTTAAGGTTTTAGGAAATAATAATTAATCAGCATTCTTTAGCAGACAAAAAATT---ATGGATACAACAGTTACAATAAATTAACTCAAACGATCTCACAAGTGAAAAATTTTTCCCGGTTAAGAGTGTAAAAACTTTAGTGTCCTAAATTGTCTCCTAATTACACGACT-GCTACTTAAACAACGTATCTCAGTAAAAGTACAGATGTCATTTCACATTTGT-CAACTCACTGATTTAATAACCACATGAAAAGGCAATAGAATTATAAAATATGTCAT-TTTTCC--AATACTCTAATGAAATTTTT------------CATGTATATGAAAATTCACTTACTTGATTATGCATTTTAATTACTATTATTTTGCAAATGTATCAAAACAAAAGGAGTTGTATCATAG-----------------CC-AAAAAGATTTTT--TAAA---TATAAAATTTGGTCTAAGT----AAGATAATGTTTTATAATAACATGAA-CTATGAAACTACAAC-------TACATATATGAAAAAATATTGATTTTGGTAAAAACTTTTCAGATTAATCCAAAAAATTTTTCATTTTTAAAACAATCTATAGCT----AGTTACTTATCAACTAATT---TCCAGTTGTTCAA--CTGACTATGAACTACTTTTTGTTTACAAAAATAAATTATGGTAACAATTTAAG------TACTGTCATA--TTTGAAGCT----TTTAAGGTTAATGTAAATTTAGTGCTGACATTTTAAAAATTACTATTAAGATGACCGTTAATTGCAGTGATTAGTGAATATAATCAAAATCATGAAACCAAATTAT--TTAAGTCGACAAGCCGCTGAA---G----TAATCATATTCATTTAGAGGTGAGAAAGTGC----AAGTTGTCTTTTTAACTGAAACCACAGTAAAATCAAG-A-AAAAAAG-AAACTCCCATTCACATTCTAAGTAAAGTTATGTAACCAAAAAAAGTTATTTGCATATATAAAAATGCGTTCAAACTAAGGTGGATGTGTGCATAGAAATCCCTATGAAGAACCCAGATTTTGTTTATGGGAAAAGTTGGCACATACTCCTGGCAAATCTTTCAGAGTCTATCATTA---AATTACCAGCTATTGAGAAGGCTTTTAGCAAGATAGCTAAATTTCTAGTTGATAACTTTAAGACTTGCTTAAAAAAATAATTCCAGTACTGCAAATAAAAAGAATTAATTTTTCTTTCTACAGACTAAAAGGTTTTGT-----TATACTTCCAAATCTGTGCCACCTTCTGCCTGATACAC-TAT--TTAGAGCTGCTCTTTTGTGTTAGTTGTTTTTCAAACTTCACTGGATGATCTC-GGAACCTCTAGGGATTTAAATCATCACGAACAAATGACAGAGTCAGACTGATGTACTATTAAAATAAAAGATAACTTACATTTGTAACACTAGTTATAAATAATAATAGGATATTAGAGAGTTTTATTAGAAGAAA-AATTGCCTG--AAAAACTTCCTCCTATTAGGTTAACCTTCTAGAATTTCTCAAACAAACCGAATTATTTCTGCAAAATCAAAGTCAATACCTGAGTCTGTTTAT-AAAATCAACATTTCACAATGCAACTATTTTTTTC-TTTTCATTTAACATTTTTAAATGATC-TCTTGTCTTCTTTTGTG-TTTTAGCTGAG-TTTGTGTGCGG--CACATTGTTGCTCCAGCTTAAAAACCCCCTGTGTGGTA-AGGGCTTGGGCAGCCCTGGGGAAGGCAATGAACATGGTGAAATTCA--GTACAG--TG----TGGTAAGACAAGGAGAGCATGAATAATATTTGGAGATCTAGCACACCTTAGTGGAAACAATTATTATTACAACTGCTTTGAAGATATTTGAATTTTAAATTCCATTGTTT--GTGAAATTCTATCTCGGCTAAATAGAGGGACTTTTGTTCAGGCTTTTGTTTTCTTTAGCATGATGTGTTTCTTTCC-CAAACTCCCCACAG----------ATAAGAA---GAT-AAATTGATCATGAATTTCTAAAAGTAGAAATCATAATTT--TTTT-GG i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21969996 2767 + 50472720 CCTTG---------GCTTTGA------------ACCAAGCC-----------------AAATGCCTCTTCAAATGCAGAT---------------------GGACAGTGTT-------------------------------------------------------------------------TTCTAATTTACACAGGACTTGGA-CCTTACCTCACTTACTCAAATAAATA-------------------------CTAAT---ACACTTAAATTTT----------TACATTACATGCACATGTTTCTC-AAAAAACTTATCAATAGaatttatattaattttatttgttttaaatatttCTGGAAAAGCATTCCTTGGG----CATTTTAGTTTCATTTATTGTCAAAGAAGAAATAGAGTGCAGCCTTTTATTTTT------------GTGTGTGTGTATTAAATATAGAGTATTAATTGGTCTAAATACTCTGGATAGAATTTCCAC--TTCTAATTAAATTCCAAACATGCTT----TG-TTTTTAGAAAAGA-----------CACATATTGATGCCCTAAATCTAAACTAAAATTAAACCAGATAAAATGCTGTGTCTTAAAGTAAGTCAGGCACCGTTGACTTGCCTCCCAAAATATC----CAATCTACCTTCAAGTTGCATAGTGCTTTCCATTCAGCAGGAATGGCTGCTATTCTAAATGCTGAAGATTTCTATTTTATTATTGGTATCCTTTAAAAAAGTAATTAGTGTGTTTAAGTACCTTCCCACATGATTACAATTTTCTCTTATTAGCTTTTAGCTGTGTGTGATATTCAACATTCATTCCTCTTTGTCTTTAGAAAGTACTTTTTAAAAATCTGAAGTTTAAACATAGGGTATGAAGATTTCTATTTGTTTTATATTTCTATTACATCAAATAATAATCTCTCTAAACTTGTATTTTGAAATACAAAGTACTTTCTTCTTCCTCGAGATCTA--CAAAATGGATTTAATTAATCTTATGCCCTTATTTAAGGTTTTAGGAAATAATAATTAATCACCATTCTTTAGTGGGC-AATAATT---ATGGATACAATTGTTACAATAAATTAACTCAAATTATCTCATAAATGAAAAGATATTCCCAGTTAAGAGTACAAAGACTTTACTGTCCTAAATCATCTCCTAATTACTCTATT-GTTACTCAAACAATATATCTCAGTTAAAGTACAGATGTCATTTCACAGTTGT-CAACTCACTAACTTAATAACCACATGAAAATGCAATAGAATTTTAAAACATGTTAT-TTTTCC--AATACTCTAATGAAATTTTT------------CATATATATGAAGAT----TTACTTGATGATGCATTTTAATTACTATTATTTTGAAAATTTATCGAAACAAAAGGAGTCATATCATAG-----------------CC-aaaaatattttt--aaaa---tataaaatttGGTCTGAGT----AAGAAAAAATTTTATGATAATATAAA-CTATGAAATTACAAC-------TGTATGTATGAAAA-ATATTGATTTTGGTAGAAAATTTTCAGTTTAATCCAGAA-ATTTTTTATTTTGAAAA-AATCTTTACCT----AATTACTTATCAACTGATT---TCCAGTTGTTCAG--CTGACTATAAACCACTTTTT-CTTACAAAAATAAATTATGCAAACAATTTAAG------TGCTAGTGTA--TTTGAAGTT-TTCTTTAGGGT-----TAAATTTAGTGCTGATGTTTTAAAAATTACTATTAAGATGGCCATTGATTACAATGATTAGTGAATATAATCAAAATCACGAAACCAAATTAT--TTAAGTAGACAAGCTGTTGAA---G----CAATCTTATTCATTTAGAGGTGAGAAAGTGC----AAGTTGTCTTTTTAACTGAAACCACAGTAAAATCAAGAATAAAAAAG-AAACTCCCATTCACATTCCAAATAAAATTATGTGATCAAAAAAAGTTATTCGCATATATAAAAATGCTTCCAAACTAAGGTGGATGTGTGCATAGAAATCTCCATGAAGAACCCAGATTTTATTTGTGGGAAAAGCTGGCACATTCTCCTGGCAAATCTTTCAGAGCCTATCATTA---AATTATCAGCTGTAGAGAAGGTTTTTCACAAGATAGCTAAATTTCTGGTTGATAACTTTAAGAC--ATTTTAAAAAATAATTTCAGTACTGCAAATAAAAAG----AATTTTTCCTTCTACAGACTAAAAGGTTTTGT-----CATACTTCCAAATCTGTGCCACCTTCTGCCTGCCACAC-TAT--TTAGAATTGCTCTTTTGCGTTAATTGTTTTTCAAACTTCACTAGATGATCTCAGGGACCTCTAGGGATTTAAATCATCATGAAC-AATGATAGAGTCAGACTGATGTGCTATTAAAGC-AAAGACAACTTACATTTGTAACACTAGTTATAAATAATAATAGGACATTAGAGAGTTTTATTAGAAGAAA-AATTGCCTG-AAAAAACATCCTTCTATCAGGCTAACCTTCTAGAATTTCTCAAACAAACCAAATTATTTCTGCAAAATCAAAGTCAATACCTGAGTCAGTTTATAAAAATTACCAATTCACAATGCAACGA-TTTTTTC-TTTTCATTTAACATTTTT-AATGATC-TCTTGTCTTCTTTTGTG-TTTTAACTGAATTTTGTGTGCAG--CACATTGTTGCTCCAACTTAAAAACCTCCTGTGTGGTG-AGGGCTT-GGCAGCCCT-GGGAAGCCAATGAACATGGTGAAATTCA--GTACAG--TG----TGGTAAGACAAGGAGAGCATG-ATAATATTTGGAGATCTAGCACACCTTAGTGGAAACAATTATTATTACAACTGCTTTGAAGATATTTGAATTTTAAATTCCATTGTTT--GTGAAATTCTATTTCAGCTAAATAGAAGGAC-TTTGTTCAGGCTTTTGTTTTCTTTAACATGATGTGTTTCTTTCC-CAAACTCCCCACAG----------ATAAAAA---GATAAATTTGATCATGAATTTCTAAAAGTAGAAATCATTATTTTCTTTT-AG i calJac3.chr21 C 0 C 0 s mm10.chr16 78154112 2876 + 98207768 CCCTGCCCCCCTTAGCTTCAAGGCCTCCAGATGACCAAATCTATCTACTTCTGCATGAAAATGTATTTACAATTTCTGATTTCAGTAATAAAACAGCTTTGGAGCAAAGTCATAAGTGGGTTTATGACTTAGGATGGCCTCCTCCTATAATTTTGACATTGAAAAGCCATAAGATAAGCAGCAATTTTAATCTATTCACGACTTGTA-ACCTACCTCAGTTAATCAAGGAAAAG-------------------------AAAAGTAAACATTCCAATATTAACTGTTTGCTGTAATATATGGATATTCCTACC--CCAGAATTGTCTGTTGAGTTCACATTAATTCTATTTGTTTGAAATGTTCCTGTAAAAGCAGTCTTAGAGTATAGGTC-TGGCTTCACTCATCA-AAAAAAAAAAAAAAAGTGATACATTTTTTTCTTCTCTTCTTTATTTTTCATATTAAATAAATATTGAGCATCAACTGGTCTAAATATTTCTTGAAGAACTTCTATACTTCTAATTAAACCCCAAACATGCTTTTTCTC-TTTTTAGATAAAAAAGGAAACCCTCATTTATTAATGCCCTGCATCTAAACTT------AGCCAGAAGAAATGCGGCACCGTAAGGCAAGTTAAACACATCTGAACTCCCCTC---------------AGCTGCCCGCAGCTTGACCTGTGTTTCCTACTCACCAATCCT-GCTGCTCTTCTCAGGGCCAAGGATGTTCCGTT--TCCTTTGTATCCCTTTCAGAAGTAATTGGTGTGTTCAAA-ACTTTTCCACATGACTCAGACTTTCTCCCCTTTGCTTTCAACTCCATGCGATAGTCAACATTCACTC---------TGTAGAACGT---------CAACCCAGAGTTCATACCAGGTGTAC--GGACTTCTATTTGTTTTATATTTCTATTCCAGTGGATAATAATTCCTCTGGGTTTCTATTTTGTCAAACAAAATATTTCTTTCCACCTCTGGATGCATTCAAATCAGGCTTAATGAATCTTACTCCCTCATTTAAGGTTTTAGGAAATAA----------CTATTATTTAGCAAGT-GATAATT---ATGGAGACAATTGCTACAATAAATCATCCTAAATTATTTCACTAACAAAAGGGCTTTCTAGGTTAATAATGTAAAATTTTTACTATACTAAATTGCTTCCTGATTATTCTACT-ACTATTTAAACAACATATATCAGTGAGACCATAGATGCTATTTTATATTTCTCCAACTTGTTAACATAATAATTATATGGGAA---AATAGA-----AATACACGCTAT-TTTTCCTGAATCCTCAAATGAAACTTTC------------TATCTATA--AAAACAAACTTATCTTATTA--CATACTCGTTATAATTATCTTAGAAGTTCCTACAAATAAAAGGAGCCTTATTATAG-----------------CC-AAAAAGATTTTTTATAAA---TATGAAATTTGGTCTCAGTGTA-GAAGGAAAATTTTATAGTGATATAAAGTTAAGAAAATACAAC-------TGTTTCTTTGAAAA-ACATCA--CTTAATGGAAAATGTTTAGTTCAGTCTAATAAAATTGTCATTTTAAAGATAATTTCTGACTACACATTTACTTATCAGCTCATT---TCCAGATGTTAAAAGCAGAATGTAAACTATTGTTTGTCCAC---------TTAT-----CACTGT-----------CCATAGTT--TTCAAGGGTTTTCTTTGAGGATAATTTACATGTGGAGCTAATATTTTAAGTTTTAC---TCAAATAACCATTGGTCACAATGATTCGTCAATGTAACTAAAATCTTGGAATCAAATTATGACCAAG---ATAAGCTCCAGACCTTG----CAATCA---TCATGCCGACTGGAAAGAGGGCAGTGAGATCCCTTTTTTAACTGAAAACACAACATAATAAAGAA-AAGAATGTAAACT-------AAATCCCAAATGTAACTGTATGACCAAAAGAAG-TATTTGCATGTAAAAATGTGTTGCCAGAGTAAGGCAGATGTG----GAGAAGCCTCTATGGAACACACAGAATGAGACTATCTG-AAAGTTGGTATATTCTCCTGGAAAATCTTTT--AATCTATCATTGATTAATTATTAAATACATAGAAA--TGTATGCCCAGTTGATAAGTTTCTGGTTGGTGAATTTAATACTTG----GAAAACTAAGTTCAGTCCTGCAAATG--AAGAATTAATTTTTCTTTCTACTCAACAAAAG--TTTGTCAACACAAACATCATGGCCTCTGTCTCCTCTGACCTGGGGCAT-TTCTATAAGAACTACTCTGTTGTATTA----TTATTCAGATTCCATGAGATGATCTCAGGAACCTTGAGAGACTTAAAACATGGCAGGTTAGCTGGGGAGTCATATAGATATGCTATTAAAGC-AAAGAGTGCTGACATCTGTACCATTTCTTGTACATAATAATAAGACTTTAATGAGTTTTGTTAAAAGAAAGAAATGCCTGGAAAAAAATTCCCTCTATCGGGTTAGCCTTCAAGAATTTCCCGA-CAGACTGAATTATTTTCACAAAATTAAAACCAATATCAGATCCTGTTTATTAAAATCACTCCCTCAATGTCCGACTA-----TTC-TTTTCCTTTGACATTTTTAAATGCTCGTCTTGTCTTCCTTTGTGTTTTTAGATGAA-TTCGTGTGCAG--TACATTG-------ATCAAAAGAAAGCGCTGCAAG----AGAGCTT-GCCAGG-CTGGGGAAGGCAGTGAGCACTG---AATTCACTGTTCAGCATC----TAGTAACACAAGAGGCATGTGGATAATAGTTAGAGATCTAGCACACCTTAGTGGAAGCAATTATAACTACAACTGCTTCAAACACATTTCCACTTC-AATTCCATTGTTTCAATGAAATTTCTTTGTACCTAAATAAAGGGAT-ATTGGTTCGGCTTGAGCTCCTCTTAATTATGTATGCTTCCTTCCACTGAATCCTCACAGGAATTATGCAATGAGAG---GA--AACCTGATCATGAATTTC-AAAACCAAAAGGCCTCCTCTCTTTTC-AG i mm10.chr16 C 0 C 0 s canFam3.chr31 13855900 2806 + 39895921 CCTTG---------ACATTGA------------ACCAAGCC-----------------AAATTTCTCCTCAAATGCAGAT---------------------GGCTAGTGTT-------------------------------------------------------------------------TTCTAATTTACATGTGTTTTGTACCCTTATCTCATTCATTCAAGCAAAAATATAGATGCGTATGTATGTATGTATATA-----CCATATTGACTCT-------------AATACACGCTCATGTTTCCCAAAAAGCATTATGTATAGATTTCACATCAGTTGTGTT---------TATTTCTCGGAAAGCATGCTGAGGGGACA--TTCTAGGCTCATTTCTTGTCAAATAGAAA------TATGGtaatttaaattt-------------ttt---tatattaaatGTAGGGCATTAATTGGTCTAAATATTCCTGGCAGAGTTTCTGCACCTCTAATTAAATTCCAAATGGGCCT----CACTTCCCAGAAAACA-----------CACGTATTAATGCCCTAAATCTAAACTA------AACCAGATGAAATGCTGCATCTTAA--CAAGTCAAGCACCACTGACATGCCTTCCTAAATTTTGAGCCAATCCACCCTCAGGCTGTGCAGCGCTTTCCATTCAACAGCAGTTGCTGCTATTCTACATGCTGAAGATTTTCATTTTGCCCTTTGTATCATTTTAACAAGTAATTAGTGTATTCGGATACCTTTCTGCATGATCTTAATTTTCTCTCATTAGCTTTTGACTC--TGTGGTATTCAAAGTTCATTCCTCTTTGTTTTTAGAAAGTATTTTTAAACAACTTGAAGTT-AAACTCAGGCATA-AAGAGTTCTATTTGTTTTATATTT--GTTACATAGAAGAATAATTTCCCTAAGCTTCTATGTTGGGAAACATACTACTCCTCTCTACCTCTACATGTATTCAAAAC-GGCTCAATAAATCTTATTCCTTTACTTAAAGTTTTAGGAAATAGTAATTAATCACCATGATTTAGCAGTT-AATAATTATGATGGAGACAATTATTTCAATAAATCAACACAAAAGATCTCACAAATGAAAGGGATTTCTGAGTTAACATTGTAAAAACTTTATAGAGCTGAATTGTTTCCTGATTATTCTATTAATTATTTAAACAATGTATCTCAGCTTAAGTACAGATGTCATTTTACATGAGCCCAACTCATTAACTTAATAACCAGATGAGAAAGCAGAAGAATGACAAAACATGTCATGTTCCCC--AATAATCAAATGAAATTTTTTAGAAACTCCTCTATATCCATAAAAATTTACTTACTTGATTATGCATTC----TGCCATTATTTTGAAAATTCATCAAAACAAAAGGAGACCTACCATAGTCAAAAAGACTTTTTTTCC-AAAAAGATTTTT--TAAATACTACAAAATTAGGTCTGGGTACAGAAGGCAATATTTTATAATGACATAAA-CTATGGAGCTTTAACCGTAGCTTTTATCTATAAAGAAATATC-ATTTTGGTGCAAAGCTTTCAGTTCAGTCCATAA---------------AAACTACCTATAACTGAGCAATTAGTTATCAACTGATT---CCCAGCCGATTAA--CTGAATATAAAGTACTTTTTGCCTATACAAATTAACCTTGCCAACAACTTAAGATTAATTGCTATAGTA--CGTGAAATT-TTCTTTAAGGT-----TAAGTTTAGAGCTGACATTCTAAA-ATTATTATTAAAATGATCCTTCATCACAATGATCAGTCAATCTAACCTAAATTATGAAACTAAATGAT--AGAAGTAGATAAGCTGCTGAA---GCTAACAATAACAGTGATTTGGAGATGAGAAAGTAC----AAATTGCCTTTTTAACTGAAACCACTGTAAGATAATGAA-AAGAAAA-CAGCTCCAAAGCATACTATGAACTGAATTATATGACCAAAAAGAGTTCTTTGCATACATAAAAGTGCTTCCAGATTAAGGTGTATACG----TAGAACCTTCTATGTAGAGCCCATAATTGGTTTATAGGAAAAATTGGCATATTCTCCTCACCAAAC-TACAGAGTCTACCATTA---AATTAACACCTATATAAGAGGCTTTTAACAAGATAGCTAAATTTCTGA--------TTTAAGACTTGGAAAAAATATTAAGTTCAGTACCACAAATAAAAGGAATCATTTTTGCTATCTACCAAA-AAAAGATTTTGC-----TGTGCTTCCGAATCTATGCCACTTCCTGCCTAAAATACTTAT--TTAGAACTGCTCTTTTGTGTTATTTTTTTTTCAAATTTCACTAGATGATCTCAGAAACCAATAGGGATTTAAATTTTCATGAAT-AATGAGGGAGTCAGATTGATATGGTATTAAAGC-AAAAATAACTTACATTTATAACACTAGTTATAAATAATAATAGGACATTAAAGAGTTTTATTAGAAGAAA-AATTGCCTG--AAAAACTCCCTCCTGTCAGGTTAACATTCTTGAATTTCTCAGACAAATCAAATTA-TTCTACAAAATCAAAGCCAATATACAAGTCTGTTTATAAAAATCACCAATTCAAAATGCAACTA-TTTGTCC-TTCTCATTTAAAATTTAAAAATGGTC-TCTTG-CTCTCTTTGTG-TTTTAGTTGAA-TTTGTGCATAG--TACATTGTTGTTTCAGCTCAAAAACCTCCTGTGTGGCAGAGGGCTT-GGCAGCCCTGAGAAAGGCAGTGAACACTGTTGAATTCA--GTGCAG--TGCATTTGCTAAC---AGGAGAGCATGAATAATATTTGGAGATCTAGCACACCTTAGTGGAAACAATTATAACTACAACTGCTTTGAAGACCTTTACATTTTAAATTCCATTGTTTTAGTTTAATTCCACTTTACCTAAATAGAGGGGC-TGTGTTTGGACAT---TTTTTCTTAAACTGATTTGTTTCTTCCC-CAAATTCCCCATGG----------ATTAAAA---GATAATTTTGATAATAAACTTCTAAAAACggggcacctgggtg--gttc-tg i canFam3.chr31 I 138 I 385 a score=86823.000000 s hg38.chr21_KI270874v1_alt 126963 25 + 166743 AATTAGCATAAAATTATTGTACAAC s panTro4.chr21 3740904 25 + 32799110 AATTAGCATAAAATTATTGTACAAC i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 17004019 25 + 48394510 AATTAGCATAAAATTATTGTACAAC i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4500838 25 + 32716333 AATTAGCATAAAATTATTGTACAAC i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168617010 25 - 198365852 AATTAGCATAAAATTATTGTACAAC i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162280613 25 - 192294377 AATTAGCATAAAATTATTGTACAAC i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150975700 25 - 180432695 AATTAGCATAAAATTATTGTACAAC i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15065296 25 - 90373283 AATTAGCATAAAATTATTGTACAAC i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21972763 25 + 50472720 AATTAGTGTAAAATTATTGTACAAC i calJac3.chr21 C 0 C 0 s mm10.chr16 78156988 25 + 98207768 AATATGCATGATGTTTTCATAGAGC i mm10.chr16 C 0 C 0 e canFam3.chr31 13858706 385 + 39895921 I a score=1159460.000000 s hg38.chr21_KI270874v1_alt 126988 340 + 166743 CCTCCATGGGCTATCAAATTGGGAGCAATCCAATTTTATTTGCCATCATGGTCACA-------TATAAAGTGTCAGATTATTCTTG-------TTAGATGATTATTGTACATTTAACTTAGAAAAGCTTCTCAGGTCTGCTCCTGAGATGCTTGAAAGACTTTTGGTTTAAATAGGTTGCATATGTTCTGCTGTTAATGGCTGAC-CGTTTTTATTTCATATTACTAAAATGTAATCAAGAAAAAGAGAGTAGAAAATACATCGCAAATATTCAGTCTACTATCTAGACAATTTCAAAAGCTTTCAATTTTATCTCCTGTTCCATTATCTTCAATTGTAGAGTTTGGATAGGAAA s panTro4.chr21 3740929 340 + 32799110 CCTCCATGGGCTATCAAATTGGGAGCAATCCAATTTTATTTGCCATCATGGTCACA-------TATAAAGTGTCAGATTATTCTTG-------TTAGATGATTATTGTACATTTAACTTAGAAAAGCTTCTCAGGTCTTCTCCTAAGATGCTTGAAAGACTTTTGGTTTAAATAGGTTGTATATGTTCTGCTGTTAATGGCTGAC-CCTTTTTATTTCATATTACTAAAATGTAATCAAGAAAAAGAGAGTAGAAAATACATCACAAATATTCAGTCTACTATCTGGACAATTTCAAAAGCTTTCAATTTTATCTCCTGTTCCATTATCTTCAATTGTAGAGTTTGGATAGGAAA i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 17004044 340 + 48394510 CCTCCATGGGCTATCAAATTGGGAGCAATCCAATTTTACTTGTCATCATGGTCACA-------AATAAAGTGTCAGATTATTCTTG-------TTAGATGATTATTGTACATTTAACTTACAAAAGCTTCTCAGGTCTGCTCCTGAGATGCTTGAAAGACTTTTGGTTTAAATAGGTTGTATATGTTCTGCTGTTAATGGCTGAC-CCTCTTTACTTCATATTACTAAAATGTAATCAAGAAAAAGAGAGTAGAAAATACATCACAAATATTCAGTCTACTTTCTAGACAATTTCAAAAGCTTTCAATTTTATCTCCTGTTCCATTATCTTCAATTGTAGGGTTTGGATACGAAA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4500863 340 + 32716333 CCTCCATGGGCTATCAAATTGGGAGCAATCCAATTTTATTTGCCATCATGGTCACA-------TATAAAGTGTCGGATTATTCTTG-------TTGGATGATTATTGTACCTTTAACTTACAAAAGGTTCTCAGGTCTGGTCCTGAGATGCTTGAAAGACTTTTGGTTTAAATAGGTTGCATATGTCCTGCTGTTAATGGCTGAC-CCTCTTTACTTCATATTACTAAAATGTAATCAAGAAAAAGAGAGTAGAAAATACATCACAAATATTCAGTCTACTATCTAGACAATTTCAAAAGCTTTCAATTTTATCTCCTGTTCCATTATCTTCAATTGTAAAGTTTGGATAGGAAA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168617035 339 - 198365852 CCTCCATGGGCTATCAAATTGGGAGCAATCCAATTTTCTTCGGCATCATGGTCACA-------TACAAAGTGTCACATTCTTCTTG-------TTAAATGACTATTGTGTATTTAATTTACAATAGCTTCTCAGGTCTGCTCTTAGGATGTTTGAAAGACTTTTGGTTTAAATAGGTTGTATATGTTCTGCTGTTAATGGCTGAC-CCTCTTTACTTCATATTACTAAAATGTAATCAAGAAAAAGAGAGTAGAAAATACATCACAAATATTCAGTCTACTCTCT-GACAATTTCAAGAGCTTTCAATTTTATCTCCTGTTCCATTATCTTCAATTATAGAGTTTGGAGAGGGAA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162280638 339 - 192294377 CCTCCATGGGCTATCAAATTGGGAGCAATCCAATTTTCTTCGGCATCATGGTCACA-------TACAAAGTGTCACATTCTTCTTG-------TTAAATGACTATTGTGTATTTAATTTACAATAGCTTCTCAGGTCTGCTCTTAGGATGTTTGAAAGACTTTTGGTTTAAATAGGTTGTATATGTTCTGCTGTTAATGGCTGAC-CCTCTTTACTTCATATTACTAAAATGTAATCAAGAAAAAGAGAGTAGAAAATACATCACAAATATTCAGTCTACTCTCT-GACAATTTCAAGAGCTTTCAATTTTATCTCCTGTTCCATTATCTTCAATTATAGAGTTTGGATAGGGAA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150975725 339 - 180432695 CCTCCATGGGCTATCAAATTGGGAGCAATCCAATTTTCTTCGGCATCATGGTCACA-------TACAAAGTGTCAGATTCTTCTTG-------TTAAATGACTATTGTGCATTTAATTTACAATAGCTTCTCAGGTCTGCTCTTAGGATGTTTGAAAGACTTTTGGTTTAAATAGGTTGTATATGTTCTGCTGTTAATGGCTGAC-CCTCTTTACTTCATATTACTAAAATGTAATCAAGAAAAAGAGAGTAGAAAATACATCACAAATATTCAGTCTACTATCT-GACAATTTCAAGAACTTTCAATTTTATCTCCTGTTCCATTATCTTCAATTATAGAGTTTGGATAgggaa i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15065321 333 - 90373283 CCTCCATGGGCTATCAAATTGGGAGCAATCCAATTTTCTTCAGCCTCATGGTCACA-------TACAAAGTGTCAGATTATTCTTG-------TTAAACGACTATTGTGCATTTAACTTACAATAGCTTCTCAGGTCTGCTCTTAGGATGTTTGAAAGACTTTTGGTTTAAATAGGTTGTATATGTTCTGCTGTTAATGGCTGAC-CCTCTTTACTTCATATTACTGAAATGTAATCAAGAAAAAGAGAATAGAAAATATATCACAAATATTCAGTCTACTAT-------ATTTAAAGAGCTTTCAATTTTATCTCCTGTTCCATTATCTTCAATTATAGAGTTTGGATAGGGAA i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21972788 326 + 50472720 CCTCCAGGGGCTATCAATTTAGGAGCAATCCAATTTTATTTGCCATCATGGTGATG-------TATAAAGTGTCAGA---TTCTTG-------TCAAATGATTATTGTACCTTTAACCTACAAAAGGTTCTCAGGTCTGCTCTTGGGATACTTGAAAGACTTTTGGTTTAAATAGGTTGTATATGTCCTGCTGTTAATGGCTGAC-CTTCTTTGCTTCATATTACTAAAATGTAAT-----------ATGTAGAAAAGACATCAAAAATATTCAGTCTACTATACAGGCAGTTTCAAGAGCTTTCAGTTTTACCTCCTGTTACATTATCTTCAATCATAGAGCCTGGATAGGAAA i calJac3.chr21 C 0 C 0 s mm10.chr16 78157013 338 + 98207768 TCCCCTGAAGCTACTGTACCAGAGACAATTGCATTTCATCTGGCATCACGGTAAAATATAAAGTATAAAGTATCACACACCCCGTGCACCCCATCAAACTACTAGTGTATTCTTGAACCACAAAGGTGTATCAGATCAGCTTTTCAAAGACTTCAAACACTTCTGTTTGCAAGTCAGTCTATGTATTCTGCTGGTGGGGTC--------ATTTAGGCCATACGACTAAAATGTCAT------GGAGAAAGCAGAAAAGACATCACAAACATCTATCCTGTTATCCAGAGAGGCTTGGGAATGCTTGG-TTTGCATCCTGTTCCATGG--CTCTGTTACACAGTTGAGATGGGTAA i mm10.chr16 C 0 N 0 s canFam3.chr31 13859091 317 + 39895921 CCTCCTTAAACGTACAATTTAGGGGCAAT------------GCCATCATGGTTAAA-------TGTAAAGTGTTGGATTTTTCTTG-------CTAAATGATTGCTGTGATTCTGATTTGCATAAGCCTGTCAGGTCAGCTCTGGGGATACTTCAAAGACTT-GGTTTCAAATAAGTTGTACATGGTCTACTCTTAATGGCTGACTCCCCTTCACTTCCTACAACTAAAATGTCATCAAG--AAAGAGAGTAAAAAAA--ATCATAAATATCCATTCTA-------GATAATTTCAAAAGCTTTCAATTTTATATTCTGTTCCATCATCCTGCAGATTAGAGTTGAGACAGGTGA i canFam3.chr31 I 385 C 0 a score=949931.000000 s hg38.chr21_KI270874v1_alt 127328 285 + 166743 AGAATTCAAAAATAAATACAAAACATTCATTCCAATACATGAAGAAAATTAGCCCTGTTCATGTACATTTTCTAATATGGATATGTTTCTAAAAATCAGAATATAATATTTATGGAGTCATTAGT-AAAATGCACTTG---ATTATCTAAGAATCTCAACTGCTTGATGCTTGATCAAAAACTAGGTAGAAACTAAATCATGCCTATCAACAATTAAATATTTCTGAAAAGgggacttccaaaatggtagaataagaagctcagcaaatactttccc-t----aaaaagtgaca s panTro4.chr21 3741269 285 + 32799110 AGAATTCAAAAATAAATACAAAACATTCATTCCAATACATGAAGAAAATTAGCCCTGTTCATGTACATTTTCAAATATGGATATGTTTCTAAAAATCAGAATATAATATTTATGGAGTCATTAGC-AAAATGCACTTG---ATTATCTAAGCATCTCAACTGCTTGATGCTTGATCAAAAACTAGGTAGAAAGTAAATCATGCCTATCAACAATTAAATATTTCTGAACAGgggacttccaaaatggtagaataagaagctcagcaaatactttccc-t----aaaaagtgaca i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 17004384 285 + 48394510 AGAATTCAAAAATAAATACAAAACATTCATTCCAATACAGGAAGAAAATTAGCCCTGTTCATGTATGCTTTAGAATATGGATATGTTTCTAAAAATCAGAATATAGTATTTATGGAGTCATTAGT-AAAATCTGCTTG---ATTATCTAAGCATCTCAACTGCTTGACGCTTGATCACAAACTAGATAGAAAGTAAATCATGCCTATCAACAATTAAATATTTCTGAACTGGGGACTTCCAAAATGGTAGAATAAGAAGTTCAGCAAATACTTTCCC-T----AAAAAGTGACA i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4501203 286 + 32716333 AGAATTCAAAAATAAATACAAAACATTCATTCCAATACATGAATAAAATTAGCCCTGTTCATGTACACTTTAGAATATGGATATGTTTCTAAAAATCAGAATATAATATTTATGGAGTCATTAGT-AAAATGCACTTG---ATTATCTAAGCATCTCAACTGCTTGATGCTTGATCAAAAACTAGGTAGAAAGTAAATCATGCCTAACAACAATTAAACATTTCTGAACAGgggacttccaaaatggtagaataagaagctcagcaaatactttccctt----aaaaTGTGACA i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168617374 284 - 198365852 AGAATTC-AAAATAAATACAGAACATTCATTCCAATACATGAAGAAAATTAGCCCTGTTCATGTACACTTTAGAATACAGATATGTTTCTAAAAATCAGAATATAGTATTTATGGAGCCATTAGT-AAAACACACTTG---ATTATCTAAGCATCTCAACTGCGTGATGCTTGATCAAAAACTAGGTAGAAAGTAAATCATGTCTACCAACAATTAAATATTTCTGAAGAGgggacttccaaaatggtagaataagaagctcaacagatactttccc-t----aaaaaatgaca i rheMac3.chr3 C 0 I 8333 s macFas5.chr3 162280977 284 - 192294377 AGAATTC-AAAATAAATACAGAACATTCATTCCAATACATGAAGAAAATTAGCCCTGTTCATGTACACTTTAGAATACAGATATGTTTCTAAAAATCAGAATATAGTATTTATGGAGCCATTAGT-AAAACACACTTG---ATTATCTAAGCATCTCAACTGCGTGATGCTTGATCAAAAACTAGGTAGAAAGTAAATCATGTCTACCAACAATTAAATATTTCTGAAGAGgggacttccaaaatggtagaataagaagctcaacagatactttccc-t----aaaaagtgaca i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150976064 284 - 180432695 agaattc-aaaataaatacagaacACTCATTCcaatacatgaagaaaattagCCCTGTTCATGTACACTTTAGAATACAGATAtgtttctaaaaatcaaaatatagtaTTTATGGAGCCATTAGT-AAAACACACTTG---ATTATCTAAGCATCTCAACTGCTTGATGCTTGATCAAAAACTAGGTAGAAAGTAAATCATGTCTACCAacaattaaatatttctgaagaGGGGACTTCCAAAATGGTAGAATAAGAAGCTCAACAAATACTTTCCC-T----AAAAAGTGACA i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15065654 284 - 90373283 AGAATTC-AAAATAAATACAGAACATTCATTCCAATACATGAAGAAAATTAGCCCTGTTCATGTACACTTTAGAATACAGATATGTTTCTAAAAATCAGAATATAGTATTTATGGAGTCATTAGT-AAAACACACTTG---ATTATCTAAGCATCTCAACTGCTTGATGCTTGATCAAAAACTAGGTAGAAAGTAAATCATGTCTATCAACAATTAAATATTTCTGAAGAGgggacttccaaaatggtagaataagaagctcaacaaatattttccc-t----aaaaagtgaca i chlSab2.chr2 C 0 I 6798 s calJac3.chr21 21973114 277 + 50472720 AGATTTCAAAAATAAATACAAAACATTCATTCTAATACATGAAGAAAATTAGCCCTGTTCATGTACACATTAGAATACGGATGTGTTGCTAAAAATCAGAA-----TATTTGTGGAGCCA-TAGT-AAAATGCACTTG---ATTATCTAAGCATCTCAACTGCTTGACACTTGATCAAAAACTAGATAGAAAGTAAAGCATGCCTATCAACAATTAAATATTTCC--AGCAAGGacttccaaaatggtagaagaagcagctcagcaaatacattccc-c----caaaaatgaca i calJac3.chr21 C 0 C 0 s canFam3.chr31 13859408 280 + 39895921 AGCATTCAAAAATAAATAGAAAACATTCATTCCAAAACATGAAGAAAATTAGCCCCATTCACGTATAGCTCCATTGACACATGTATTTCTAAAAACCAGGATATAATATTTATGGAGTCTTAGGTAAAAATACACTTGCTTATTATCCAGGCATCTCAACTATTTGCTACATGACTGAAAACTAGCAAGAAAGCAAAT-ATGCTCATCAA----TAAATATTTCAGACCAAGCgactcccaaaatggcagaacaag--------caaatgttctccc-cccaaaaacagtgata i canFam3.chr31 C 0 N 0 a score=26031.000000 s hg38.chr21_KI270874v1_alt 127613 26 + 166743 aCAggggtggagccaagatggctgaa s panTro4.chr21 3741554 26 + 32799110 aCAggggtggagacaagatggctgaa i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 17004669 26 + 48394510 ACAggggtagagccaagatggccaaa i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4501489 26 + 32716333 ACAggggtagagccaagatggctgaa i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162281261 24 - 192294377 gcaaagctgaag--aaaatggtcaaa i macFas5.chr3 C 0 I 7122 s papAnu2.chr3 150976348 24 - 180432695 GCATAGCTAAAG--AAAATGGTCAAA i papAnu2.chr3 C 0 I 6857 s calJac3.chr21 21973391 24 + 50472720 acaaagctaaag--aaaatggtcaaa i calJac3.chr21 C 0 N 0 e rheMac3.chr3 168617658 8333 - 198365852 I e chlSab2.chr2 15065938 6798 - 90373283 I a score=314169.000000 s hg38.chr21_KI270874v1_alt 127639 608 + 166743 taggaatagctccagtctatagctcccagtgtgagcgacacagaagatgggtgatttctgcatttccaactgaggtactgggttcatctcactggggagtgtcagacagtgggtgcaggacaatggaagcagtgcactgagtgtgagccaaagcagggcaaggcatcacctcacccgggaagcacaaggggtcagagaattccctttcctagtcaaagaaaggggtgacagatggcacctggaaaatcaggtcactcccaccctaataccgcacctttccaatggtcttagcaaatggcacaccaggagattatatcccacgcatggcttggagggtcctatgcccatggagcctcactcattgctagcacagcaggctgagatcaaactgcaaggtggcagtgaggctgggggaggggagcccaccattgctgaggcttgagtaagtaaacaaagtggctggaaagctcgaactgggtggagcccaccgcagctcaagcaggcctgcctgcctctgtagactccacctctgggggcagggcatagccaaacaaaaggcagcagaaacctctgcagaccttaatgtccctgtctgacagctttgaaga s panTro4.chr21 3741580 608 + 32799110 taggaatagctccagtctatagctcccagcgtgagcgacacagaagatgggtgatttctgcatttccaactgaggtactgggttcatctcactggggagtgtcagacagtgggtgaaggacagtggaagcagtgcactgagtgtgagccaaagcagggcaaggcatcgcctcacccaggaagcacaaggggtcagagaattccctttcctagtcaaagaaaggggtgacagatggcacctggaaaatcaggtcactcccaccctaatactgcacctttccaatggtcttagcaaatggcacaccaggagattatatcccatgcatggcttggagggtcctatgcccatggagcctcactcattgctagcacagcaggctgagatcaaactgcaaggtggcagtgaggctgggggaggggagcccaccattgctgaggcttgagtaagtaaacaaagtggctggaaacctcgaactgggtgaagcccaccgcagctcaagcaggcctgcctgcctctgtagactccacctctgggggcagggcatagccaaacaaaaggcagcagaaacttctgcagaccttaatgtccctgtctgacagctttgaaga i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 17004695 608 + 48394510 taggaacagctccagtctatagcccccagcatgagcgacacagaagacaggtgatttctgcatttccaactgaggtactgggttcatctcactgaggagtgtcagatagtgggtgcaggacagtgggtgcagtgcactgagtgtgagccaaagcagggcgaggcatcacctcacctgggaagcacaaggggtcacagaattccctttcctagtcaaagaaaggggtgacagatggcacccagaaaattgggtcaatcccaccctaatactgcacctttccaatggtcttagcaaacagcacaccaggagattatatcccacacctggcttggagggtcctatgcccatggagcctcactcattgctagcacagcaggctgagatcaaaccacaaggtggcagcgaggctgggggatgggagcccaccattgctgaggcttgagtaagtaaacaaagtggccagaaatctcgaactgggtggagcccaccacagctcaaggaggcctccctgcctctgtagactccacctctgggggcagggcatagccaaacaaaaggcagcagaaacctctgtagacttaattgtccttgtctgacagctttgaaga i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4501515 607 + 32716333 taggaacagctccagtctatagctcccagtgtgagtgacacagaagatgggtgatttctgcatttccaactgaggtactgggttcatctcactggggagtgtcagacagtgggtgcaggagagtgggtgcagtgcactaagcatgagccaaagcagggcgaggcatcgcctcacctgggaagcacaaggggtcagggaattccctttcctagtcaaagaaaggggtgacagatggcacctggaatgtccggtccctcccaccctaataccgcacctttccaatggtcttagcaaacagcacaccaggagattacatcccacacctggctcagagggtcctacacccatggagcctcactcattgctagcacagca-gctgagattaaactgcaaggtggcagccaggctgggggaggggagcccaccattgctgaggcttgagtaaataaacaaagcgaccgggaagctcgaactgggtggagcccactgcagctcaaggaggcctgcctgcctctgtagactccacctctgggggcagggcatagtcaaagaaaaggcagcagaaacctctgcagacttaaatgtccctgcctgacagctttgaaga i nomLeu3.chr25 C 0 I 12816 e rheMac3.chr3 168617658 8333 - 198365852 I e chlSab2.chr2 15065938 6798 - 90373283 I e macFas5.chr3 162281285 7122 - 192294377 I e papAnu2.chr3 150976372 6857 - 180432695 I a score=344029.000000 s hg38.chr21_KI270874v1_alt 128247 1318 + 166743 gagtagtggttctcccagcacacagctggagatctgagaatggacagactgcctcctcaagtgggtccctgacccccaagtagcctaactgggaggcatcccccagtaggggcagactgacacctcacacggccaggtactcctctgagacaaaactgccagaggaacgatcaggcagcaacatttgctgctcagcaatatccactgttctgcaccctctgctgctgatacccaggcaaacagggtctggagtgtacctccagcaaactccaacagacctgcaactgagggtcatgactgttagaaggaaaactaacaaacagaaagaacatccacaccaaaaccccatctgtacatcaccattatcaaagaccaaaggtagataaaaccacaaagatggggaaaaaacagagtagaaaaactggaaactctaaaaatcagagtgcctctcctcctccaaaggaatgcagcacctcaccagcaatggaacaaagctgtacggagaatgacattgacgagttgagagaagaaggcttcagacgatcaaactactctgagctaaaggaggaagtttgaacccatggcaaagaagttaaaaaccttgaaaaaaaatt-agatgaatggctaactagaatcaccaatgcacagaagtccttaaaggacctgatggagctgaaaaccaagacacaa----------------gcacaagcctcagtagccgattcaatcaactggaagaaagagtatcagtgatggaagatcaaatcaatgaaatgaagcaagaagagaagtttagagaacaaagaataaaaagaaatgaacaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctgattggtgtacctgaaagtgacagggagcatggaaccaagttgggaaacactcttcaggatattatccaggagaacttccccaatctagcatcgt-ggccaacattcaaattcaggaaatatggtgaacaccacaaagatacttcttgagaagagcaactccaagacacataattgtcagattcaacatatttgaaatgaagaaaaaaatgttaagggcagccagagagaaaggtcgggttacccacaaagggaagcccatcagactaacagcttatctctcagcagaaactctacaagccagaagagagtgggggccaatattcaacattcttaaagaattttcaacccagaatttcatatccagccaaactaagcttcataagtgaaggagaaataaaatcctttacagacaagcaaatgctgagagattttgtcaccaccaggcctgctctaaaaga s panTro4.chr21 3742188 1334 + 32799110 gagtagtggttcttccagcatgcacctggagatctgagaatggacagactgcctcctcaagtgggtccctgacccccgagtagcctaactgggaggcatcccccagtaggggcagactgacacctcaaacggccaggtactcctctgagacaaaactgccagaggaacgatcaggcagcaacatttgctgctcagcaatatccgctgttctgcatcctctgctgctgatacccaggcaaacagggtctggagtgtacctccagcaaactccaacagacctgcagctgagggtcctgactattagaaggaaaactaacaaacagaaagaacatccacaccaaaaccccatctgtacatcaccattatcaaagaccaaaggtagataaaaccacaaagatggggaaaaaacagagcagaaaaactggaaactctaaaaatcggagtgcctctcctcctccaaaggaatgcagcacctcaccagcaatggaacaaagctgtacggagaatgacattgacgagttgagagaagaaggcttcagacaatcaaactactccgagctaaaggtggaagttcaaacctatggcaaagaagttaaaaaccttgaaaaaaaatt-agatgaatggctaactagaataaccaatgcagagaagtccttaaaggacctgatggagctgaaaaccaaggcacaagaactacgtgacgaatgcacaagcctcagtagccgattcaatcaactggaagaaagggtatcagtgatggaagatcaaatcaatgaaatgaagcaagaagagaagtttagagaacaaagaataaaaagaaatgaacaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctgattggcgtacctgaaagtgacagggagaaaggaaccaagttggaaaacactcttcaggatattatccaggagaacttcgccaatctagcaacgt-ggccaacattcaaattcaggaaatatagagaacaccacaaagatacttcttgagaagagcaactccaagacacataattgtcagattcaacaaatttgaaatgaagaaaaaaatgttaagggcagccagagagaaaggtcgggttacccacaaagggaagcccatcagactaacagctgatctctcagcagaaactctacaagacagaagagagtgggggccaatattcaacattcttaaagaatcttcaacccagaatttcatatccagccaaactaagcttcataaatgaaggagaaataaaatcctttacagacaagcaaatgctgagagattttgtcatcaccaggcctgccctaaaaga i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 17005303 1336 + 48394510 gagtagtggttctcccagcatgcagctggagatctgagaatggacagactgtctcatcaagtgggtccctgacccccgggtcacctaactgggaggcatcccctagtaggggcagactgacacctcacatggccaggtactcctctgagacaaaacttccaaaggaacgatcaggcagcaacatttggggcccagcaatatccactcttctgcaccctccactgctgatacccaggcaaacagggtctggagtgtaccttcagcaaactccaacagatctgcagctgagggtcctgactgttagaaggaaaactaacaaacagaaagaacatccacaccaaaaccccatctgtacatcaccattatcaaagaccaaaggtagataaaaccacaaagatagggaaaaaacagagcagaaaaactggaaactctaaaaatcagagcaactctcctcctccaaaggaatgcagcacctcaccagcaatggaacaaagctggacagagaatgacattgataagttgagagaagaaggcttcagatgatcaaactactctgagctaaaggaggaagttcgaacccatggcaaagaagttaaaaaccttgaaaaaaaattaagatgaatggctaaccagaataaccaatgcagagaagtccttaaaggacctgatggagctgaaaatcatggcacaagaactatgtgatgaatgcacaagcctcagtagccgatttgatcaactggaagaaaggttatcagtgatggaagatcaaatcaatgaaatgaagcaagaagagaaccttagagaacaaagaacaaaaagaaataaacaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacatctgattggtgtacctgaaagtgacagggagaatggaaccgagttggaaaacattctgcaggatattatccaggagaaattccccaatctagcaatgcaggccaatgttcaaattcaggaaatacagagaacaccacaaagatactcctcaagaagagcaactccaagacacataattgtcagattcaccaaatttgaaatgaagaaaaaaatgttaatggcagccagagggaaaggtcagcttacccacaaagggaagcccatcaaactaacagctgatctctcagcagaaactctacaagccagaagagagtgggggccaatattcaacattcttaaagaattttcaacccagaatttcatatccagccaaactaagcttcataagtgaaggagaaataaaatcctttacagacaagcaaatgctgagagattttgtcaccaccagacctgccctaaaaga i ponAbe2.chr21 C 0 I 19163 e rheMac3.chr3 168617658 8333 - 198365852 I e chlSab2.chr2 15065938 6798 - 90373283 I e macFas5.chr3 162281285 7122 - 192294377 I e papAnu2.chr3 150976372 6857 - 180432695 I e nomLeu3.chr25 4502122 12816 + 32716333 I a score=346435.000000 s hg38.chr21_KI270874v1_alt 129565 3935 + 166743 aaagttttagaaggaagcactggaatttcatgtccagccaaactaagcttcataagtgaaagggaaataaaatcctttacagacaagcaaatgctgagagattttgtcaccaccaggcctgccctaaaagaaaagttcctgaaggaagcactaaacatggaaaggaacaaccggtaccagccactgcaaaaacatgccaaattttaaagaccatcaagactaggaagaaactgcatcaaccaatgagcaaaataaccagctaacatcataatgacaggatcaaattcacatataacaatattaactttaaatgtaaatgggctaaatgccccagttgaaagacacagactggcaaattggataaagagtcaagacccatcagtgtgctgtattcaggaaacccatctcatgtgcagagacacacataggctcaaaataaaaggatggaggaagatctaccaggcaaatggaaaacaaaaaatgcaggggttgcatatcctagtctgataaaacagacatcaaaccaacaaagatcaaaagagacaaagaaggccattaaataacggtaaagggatcaattcaacaagaagagctaactatcctaaatatatatgcacccaatacaggagtacccagattcataaagcaagtccttagagaccgacaaagaggcttagactcccacacaataataatgggagactttaacaccccactgtcaacattagacagatcaacaagagagaaagttaacaaggatatccaggaattgaactcagctctgcaccaagcggacctaatagacatgtacagaactctccaccccaaatcaacagaatatacattcttctcagcaccacactgcacttatcctccaaaattgaccacatagttggaagtaaagaactcctcggcaaatgtaaaagaacagaaattataacaaactgcctctcagaccacaatgcaatcaaactagaactcaggattaagaaactcactcaaaactgctcaactacatggaaactgaaaaacctgctccttaatcactactgggtacacaacgaaatgaaggcagaaataaagatgttcttcaaaaccaacaagaacaaagacacaacataccagaatctctgggacacattcaaagcagtgtgtagagagaaatttatagcactaaatgcccacaagagaaagcaggaaagatctaaaattgacaccctaacatcacaattaaaagaactagagaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaagatcagagcagaactgaaggaaatagagacacaaaaacccttcaaaaaatcgaagaatccaggagctggtttttcggaaagatcaacaaaattgctagactgctagcacgactaataaagaagaaaagagagaagaatcaaatagacgcaataaaaaatgataaagtggatcttaccaccaatcccacagaaatacaaactaccatcagagaacactataaacacctctatgcaaataaactagaaaatctggaagaaatggataaattcctggaaacatacaccctctcaagactaaaccaggaagaagttgaatctctgaatagaccaataacaggctctgaaattgaggtaataattaatagcttatcaaccaaaaaaagtccaggaccagatggattcacagccgaattctaccagaggcacaagaaggagctagtaccattccttctgaaactattgcaatcaatagaaaaagaggaaatcctccctaactcattttatgaggccagcatcatcctgataccaaagcctggcagagacacaataaaaaaatagaattttagaccaatatccctgatgaacattgatgcaaaaatcctcaataaaatactggcaaaccgaatccagcagcacatcaagaagcttatccaccatgatcaagtgggcttcatccctggaatggaaggctggttcaacacatgcaaatcaataaatgtgatccagcagataaacggaaccaatgacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaattcaacaatgcttcatgctaaaaactctcaataaattaggtattgatgggatgtatcacaaaataataagagctatctatgacaaacccacagccaatatcatactgaatgggcaaaaactggaaacattccctttgaaaactggcacaagacaggggtgccctctctcaccactcctattcaacatagtgttggaagttctggtcagggcaatcaggcaggagaagg-aaaaaaagtattcaattaggaaaaggggaagtcaaattgtccctgtttgcagatgacataattgtatatctagaaaatcccattgtctcagcccaaaatctccttaagctgatagacaacatcagcaaagtctcaggatacaaaatcaatgtgcaaagatcacaagcattcttatacacaaataacagacaaacagagagccaaatcatgagtaaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttccaagggatgtgaaggaccccttcaaggagaactacaaaccactgctcaatgaaataaaagaggatacaaacaaatggaagaacattccatgctcatgggtaggaaaaataaatatcatgaaaatgaccatacttaccaaggtaatttacagattcaatgccatccccatcaagctaccaatgattttcttcacagaattggaaaaaactacttaaaagttcatatggaacc-aaaaaagagccctcattgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacgctacctgacttcaaactatactacaaggctacagtaaacaaaacagcatggtactggtaccaaaacagagatatagactaatggaacagaacagaggcctcagaaataatgccacatatctacaactatctgatctttgacaaacctgacaaaaagaagaaatggggaaagtattccctatttaataaattgtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttacgccttatacaaaaattaattcaagatggattaaagacttacatgttacacctaaaatcataaaaatcctagaagaaaatctaggcaataccattcaggacataggcatgggcaagtacttcatgtctaagacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctacagaatgggagaaaattttcgcaacctactcatctgacaaagggctaatatccagaatctacaatgaactcaaacaaatttacaagaaataaacaatcccatcaaaaagtgggtgaaggatatgaacagacattcctcaaaagaagacatttgtgcagccaaaagacacctgaaaaaatattcatcatcactggccatcagagaaatgcaaatcaaaatcacaatgagataccatctcacaccagttagaatggcgatctttaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaataggaacacttttacactgttggtgggactgtaaactagttcaaccattgtggaagtcagtgtggcaattcctcagggatctagaactagaaataccatttgacccagccatctcattactgggtatatacccgaaggattataaatcatgctgctatagagacacatgcacacgtaggtttattgcggcactattcacaatagcaaagacttggaaccaacccaaatgtccaacgatgatagactggattaagaaaatgtgg s panTro4.chr21 3743522 3923 + 32799110 aaagttttcgaaggaagcactggaatttcatgtccagccaaactaagcttcataagtgaaagggaaataaaatcttttacagacaagcaaatgctgagagattttgtcaccaccacgcctgccctaaaagaaaagttcctgaaggaagcactaaacatggaaaggaacaactggtaccagccactgcaaaaacatgccaaattgtaaagaccatcaaggctaggaagaaactgcatcaaccaatgagcaaaataaccagctaacatcataatgaca-gatcaaattcacatataacaatattaactgtaaatgtaaatgggctaaatgccccagttgaaagacacagactggcaaattggataaagagtcaagacccatcagtgtgctgtattcaggaaacccatctcacgtgcacagacacacataggctcaaaataaaaggatggaggaagatctaccaggcaaatggaaaacaaaaaaggcaggggttgca-atcctagtgtgataaaacagacttcaaaccaacatagatcaaaagacacaaagaaggccattaaataatggtaaagggatcaattcaacaagaagagctaactatcctaaatacatatgcacccaatacaggagtacccagattcataaagcaagtccttagagacctacaaagagacttagactcccacacaatcataatgggagactttaacaccccactgtcaacatt----agatcaacaagacagaaagttaacaaggatatccaggaattgaactcaactctgcaccaagcggacctaatagacatctacagaactctccaccccaaatcaacagaatatacattcttctcagcaccacactgcaatta--ctccaaaattgaccacatagttggaagtaaagcacttctcggcaaatgtaaaagaacaaaaattataacaaactatctctcagaccacagtgcaatcaaactagaactcaggattaagaaactcactcaaaactgctcaactacatggaaactgaacaacctgctcctgaatgactactgggtacacaacgaaatgaaggcagaaataaaggtgttctttgaaaccaacaagaacaaagacacaacataccagaatctctgggacacattcaaagcagtgcgtagagggaaatttatagcactaaatgcccacaagaggaagcaggaaagatctaaaattgacaccctaacatcacaattaaaagaactagagaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaagatcagagcagaactgaaggaaatagagacaaaaaaacccttcaaaaaatcgaagaatccaggagctggtttttcggaaagatcaacaaaattgctagactgctagcaagactaataaagaagaaaagagagaagaatcaaatagacgcaataaaaaatgataaaggggatctcaccaccaatcccacagaaatacaaactaccatcagagaatactataaacacctctatgcaaataaactagaaaatctggaagaaatggataaattcctggaaatatacaccctctcaagactaaatcaggaagaagttgaatctctgaatagaccaataacaggctctgaaattgaggtaataattaatagcttatcaaccaaaaaaagtccaggaccagatggattcacagccgaattctaccagagccacaagaaggagctagtaccattccttcggaaactattccaatgaatagaaaaagaggaaatcctccctaactcattttatgaggccaccatcatcctgataccaaagcctggcagagacac-ataaaaaaagagaattttagaccaatatccttgatgaacattgatgcaaaaatcctcaataaaatactggcaaaccgaatccagcagcacatcaagaagcttatccaccacgatcaagtgggcttcatccctggaatggaagggtggttcaacacatgcaaatcaataaatgtaatccagcatataaatggaaccaatgacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaattcaacaatgcttcatgctaaaaactctcaataaattatgtattgatgggatgtatctcaaaataataagagctatctatgacaaacctacagccaatatcatactgaatggtcaaaaactggaaacattccctttgaaaacttgcacgagacaggggtgccctctctcaccactcctgttcaacatagtgttggaagttctggtcagggcaatcaggcaggagaaggcaaaaagggtattcaattaggaaaagaggaagtcaaattgtccctgtgtgcagatgacataattgtatatctaggaagtcccatcgtctcagcccaaaatctccttcagctgatagacaacttcagcaaagtctcaggatacaaaatcaatgtgcaaagatcacaagcattcttatacacaaataacag----acagagagccaaatcatgagtaaactcccattcacaattgcttcaaagagaataaaatacctacgaatccaacttacaagggatgtgaaggaccccttcaaggagaactacaaaccactgctcaatgaaataaaagaggatacaaacaaatggaagaacattccatgctcatgggtaggaagaataaatatcatgaaaatgaccatacttaccaaggtaagttacagattcaatgccatccccctcaagctaccaatgattttcttcacagaattggaaaaaactacttaaaagttcatatggaaccaaaaaaagagcccgcattgccaagtcaatcctaagccaaaagaacaaagctggaggcatcatgctacctgacttcaaactatactacaaggctacagtaaccaaaacagcatgctactggtaccaacacagagatatagactaatggaacagaacagaggcctcagaaataatgccacatatctacaactatctgatctttgacaaacctgacaaaaagaagaaatggggaaagtattccctatttaataaatggtgctggggaaactggctaggcatacgtagaaagctgaaactggatcccttccttacaccttatacaaaaatcaattcaagatggattaaagacttaaatgttagacctaaaatcataaaaaccctagaagaaaacctaggcaataccattcaggacataggcatgggcaaggacttcatgtctaagacaccaaaagcaatggcaacaaaagacaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctacagaatgggagaaaattttcacaacctactcatctgacaaagggctaatatccagaatctacaaggaactcaaacaaatttagaagaaataaacaatcccatcaaaaagtgggtg-aggatatgaacagacatttctcaaaagaagacatttgtgcagccaaaagacacatgaaaaaatgttcatcatcactggccatcagagaaatgcaaatcaaaatcacaatgagataccatctcacaccagttagaatggcgatctttaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaataggaacacttttacactgttggcgggactgtaaactagttcaaccattgtggaagtcagtgtggagattcctcagggatctagaactagaaataccatttgacccagccatcccactactggatagatacccaaaggattataaatcatgctgctataaagacacatgcaaatgtaggtttattgtggcagtattcccaatagcaaagacttggaaccaacccaaatgtccaacaatgatagactggattaagaaaatgtgg i panTro4.chr21 C 0 I 921 e rheMac3.chr3 168617658 8333 - 198365852 I e ponAbe2.chr21 17006639 19163 + 48394510 I e chlSab2.chr2 15065938 6798 - 90373283 I e macFas5.chr3 162281285 7122 - 192294377 I e papAnu2.chr3 150976372 6857 - 180432695 I e nomLeu3.chr25 4502122 12816 + 32716333 I a score=597409.000000 s hg38.chr21_KI270874v1_alt 133500 6737 + 166743 cacatacacaccatggaatactatgcagccataaaaaatgatgagttcatgtcctttgtagggacatgggtgaagctggaaaccatcattctcagcaaactatcgcaacgacaaaaaaccaaacaccacatgttctcactcataggtgggaattgaacaatgagaacacgtggacacaggaaggggaacatcacacagcaggacctgttgtggggtggggggagggggaagggatagcattaggagatatacctaatgttaaatgaggagttaatggatgcagcacaccagcatggcacatgtatacatatgtaacaaacctgcacattgtgcaaatgtaccctataacttaaagtataatTTTTaaaaagtgaccacaaatctaaagaaaattgtcaaaaacaactatttgaagactccataaattgtccaaaatcatgcaacaaattgagatgaatttattcaggaaaagcctccaggaaggacagtgggagtctggggcatttatatcgggagctgctcccttcccccactaccttccagctttgttagcatggtagatacttgaaggtaggacaagctgtgaaaaatagcagctttgctgttggaggggggatcacttagtttgaagtggagcaccaagcaactctatgtccgggggcattattgaaaatagtcgcaatctctgtggcaaacaaatagggaaggtcaaccacatagctatcctaagcttgaggtcctagccagagcaagcaacaaagtggcaaactagctagaaaatgaacaagaagagtggggaatgagatgatattattgggacttgataagttcctctctgtctctggaaatttggaaggctgcacagatgcacatgtgtaggagaaaccagaaagggccctagccatccattcatccctgactgaatatgaaatcttgtgaatgcacagaagaaatgtgagaggtcctaaaagaaagcaaaagctgaaactgacttgtgaactgcctgaattttgaatatgttcccaaacatacagtcaagtcaatgcaaagagggtgaaaatattactgggtcaaggtagttgagcatgtttcctgaacaatcattggctaaccactaagctatgctgtcacaagggtgaacccctaagaggctaccgttaagaatgctaaaaagattatttaaaaaaaaaaagaaaagaaaaactgagtagaaacatcagagaatgcattctgtcaaaaaaaagaaaaagaaaaaagaaagaaagaaagaaagaaaacgaaaaaagactccacatgtttggtcctggaaaattactaaacacagacaccagcaacaacaatctacaacaacaa--aaaaaatcagaatccagagttgcaacaatacattatgtgtaactagacatatgcctagttataagaacaaaaaaaatacagacatgtaaagaaacaagaaaaggtgccccaaacaaatggggtgaaaaggcagtcaGGAagagaggcagagtaagatggcagaatagaaagttccaccaactgttcccccataaggacaccaatttaactatcgacacagaaggaaaaaaa-tacctttataagaaccaaaaatcaggtgagccctcatagtacttggttttaactatgtaatgatgaaaaacacactgaagagacagaaaaaacaatcttgaatctccaatgccagccccccacaccacaaccctgggagcagtggcatggtgcagacagcatctctgggtgctggggaagcacagcaattgtgaggcattggcctcagtgctgtcctgttagagcagaaagggaaactggaccaaactcagctgacactcacccaggaagggaacatttaaccagcactagccagagaggaattgccaatcccagcggtcccaatttgagttcctgcaaaccttggcacttaaggccaaagtgctctgtgtctccaaataaacttgaaaggtagcctaggccataaggactgaaagtcttaggtgagttctagggcttaactgggcccagaagacgatggactttgggggcacatgacgtactgagacatcagctgggacagccaagagagcgttgacatcaccccttctctaaccccaggatgcacagctcacagctcgaaaatagtccccatccttccacttgaagagaagagaggaagagtgtgggtgactttgtcttgcattttggatgctagctcagccacagcaggatggggcactagttagagttgtaagtcctttgatacaggccttagctcccagaccacatttctagacacggcctgagccagaaaataaatcctctgccttgaagtcaagaaacaagtcctgacaacatttatcacctaactgaagaaccgttgggccctgaacaaccagatctacacccagatact--gtcaagggccttgggtgagcctctgaggcttactggctttaggtgagattcaacatattaccagcagtggtggtgaagggatgaaattccttctacttgagaaaagcagaggaaaaagtaaaggagactttgtcttgcacctcaggtactaactcaaccacggcagggtagagcaccaagcaggctcctgggggtgtgggggggggggggtccccgatttcagcactggattctcggacagcatctctggacctgccctgggctggaggggagcttcctgccctaaaggttgagtcccaggccagggaaaattcacaataagctgacttaacccttgagctttaaggaaatatcagtggtgtctggcagaatgcttgatgggactgtggtgggagaggcttctctgcctttgggaaaaaaagggaagagtgggaagcactgtgtcttgtggtttgagtgccaccttaggtgcagtacaatagaacaccaggtagacttctaagctttttgcctctagaccccaactccaaggtggcatctctggacccaccttaggcctggggaaagtcaccacctttaatggaagaacagatgcctggctgactctgccacctgctgattgtataaccccagaaccttgagcaaacaaaggcagtacacaggaaatggatacaggtggccttgggggagaaccagtgttgtgctggcttcaggtctgactcagtgcagtcatagtgatggtggcttgtgtcattccatctccagctttagacggctcagaacagggagacatactctgttaggaagaaagggaagagaataggagtctctgcctggtaatccagagaatcctgctgaatcttgtataagaccattaaagcaatatctctatgagtctgcaagaactacagcattactggcttggaatgcccccataaaacagataaagtttagatcataacacccaagtcctttcaaatattttgaaaacctgcccaataaggaagggtacaaacaattccagactgagaagactacaatgaatacataactcttcaatactcagacacagagaaacctctgcaggtatcaaggcattccaggaaagcatgacatcaccaaatgaactaaataagtcaccaggaatgaatactggagaaacagagatatgtgaccttttagacacaggattcataatggcctttttaaggacactcaaataaattcaagataacacaaagaaggaattaagaattctatcagaaaaatttaacagagattaaaataatttgaaagaatcaagcagaagttctggagctgaaaaatgcaattggcacactgaagaatgtactagagtcctttagtagcagaattgatcaagcagaaagaagaattagtgagcctgaagacaatttatttgaaaacacacag----gggagaaaaaa-ggaaaaaagaatgaacaataaagcacacctacaggaaggaaagaaagaagaatacaccacaaaaaaaccagaaaacacatttaaaaaatggcagaagtaagtccttacttatcaataataacattgaatgtaagtggattaaatcctttaatcaaaagacatagactgaatgaaaaaaaagactgaatgaatgaaaaaacaagacccattgatctgttgccatcaagaaatacatttcacccatcaagacacacatagactaaaaataaagggatggaaaaagatatttcatagctaaaaaaaa-gaacatgagtagctataattatcttagataaaatagattttgagacaaaa-ctataagagaaaaatgtcactatacaataataaagtggcaaattcaacaagagaatataacaactttaaatatatatgtacccaacattagagaacctatatgtataaagaaaatattattagagctaaagagagatgggccccaatacaataatagctggagatttcaacactccactttcagcattgaacagatcttccagatacaaaatcaacaaagaaacgtcatactcagtcttcactaaagaccaaatgggtctaatagatatttacagaacatttcattcagtggctgcagaatacacattttttctcagcacatgaattattctcaaaaaacaggccatatgttaggtcacaaaacaaggtttaaaactcacaatgaaataaaattagaaattgataacaagaggaattttggaaactgtacaaatacatggatataaaccaatgcattcctgaatgtccagtgaatcaataaagaaatcaagaaagaaactaaaaaatgtcttgaaacagatgataatggaaacacaacatcctaaacctatgatcagggatacagcaaaagcaatattaagactctgtcttttgtaaatagcccagtcttgagtatgtttttattagcagaatgaaaatggactaatacagtgaattgctgctggtagagtggggcattgctaaaaaggtacccaaaaatgtagaagcaaatttggaacttggtaacaggaagaggttggaacagtttggatggctcagaagaagactggaaaatgtgggaaagtttggaacttcctacagacttgttgaatggctttgcccaaaatgctgatagtgatatggacaataaaatccaggctgaggtggtcccagatgaacaagaggaatttgttggaaactggagcaaaagtgactcatgttacagcaaagagactggtggcattttgctcctaccctagagatttgagaaactttgaacttgagagaaatgattttgggtatctggtagaagaaatgtctaagcagaaaagcatttaagaggtgacttgggtgctgttaaaggcattcagctttgtaagggaagcagagcatataagttcagaaaatttacagcctgacaatgtgatagaaaaaaaaa-gtcctattttctgaggcgaaattcaagccagctgcagatatttgcataagtaatgagaatctgaacgttaattcccaagacaatggggaaaatgtctccagggcatatcagaggtcttcacagcagccctggaagccaaggaagaaaagatgacttcatggaccaggctaagagtcccagtgctgggtgcagtctagggacttggtgccctgcatcccagctgctccagctgtgactaaaaggggccaagctacagttcaggccatggctttagagggttgaagccccatctattggcagcttgcacatggtgttgagtctgtgggtgcacaggagtcgagaattaaggtttggaaacctccacctatatttcaggagatgtatggaaatgcctggatgcccaggcaaaagtttgctgcagggatggggtgctcatgggggacctctgctagggcagagcagaagggaaatgtggggatgaagccccccacacagagtccccattggggcactgcctagtggagctgtgagaagaggtccaacatccttcagaccccagaatggtagatccacctacagtttgGtagaccaagcagaagaaaagatatcagagcttgaatactaccttgatgagataaggcaggcagagaagattagaggaaaaagaaagaaaaggagcaaacaaaactgctgagaactatcagattatgttacaggatggaacctacaactaataggggtacctaaaagagatggagaaaacagaaccaagttggaaacacactttagagtcatccaggagaacttccccaacctagcaagacaggccaacattcaaattcaggaaatccagagaacctcagtaagatacaccatgagaaaatcaatctcaagacacacaatcatcagattctctaaggtcaaaatgggaaaaaaaaaaaaaaaaaagcagttacgtgcagccagagagaaaggccaggtcacttataaatggaaccccatcagactaacagcaaaattcccacaagccaaaagggattggaggccaatattcaacattcttaaagaaaagaatttccagcctagaatttcatgtctggtctaagtttcataagcaaaggagaaataaaatcttttttagacaagcaaatgctgaggaaatttattaacaccaggactgcctggctcctgaaggaagcattaaatatggaaaagaaaaatctttaccagccactacaacaacacactgaggtacacaaactaatgatactatgaagcaactacagaaacaagtctgcaaaataaccagctagcatcatgacgacaggttccaactcacacataacaatatttaccttaaatgtaaatcggcaaaatgccc s panTro4.chr21 3748366 6702 + 32799110 cacatatacaccatggaatactatgcagccataaaaaatgatgagttcatgtcctttgtagggacatgggtgaagttggaaaccatcattctcagcaaactatcgcaaggacaaaaaacaaaacaccgcatgttctcactcataggtgggaattgaacaatgagaacacatggacacaggaaggggaacatcacacaccggggcctgttgtggggtggggatagtggggagggatagcattaggagatatacctaatgttaaatgacgagttaatgggtgtagcacaccaacatggcacatgtatacatatgtaacaaa-------------------------ATAACTTAAAGTATAATTTTTTaaaagtgaccacaaatctaaagaaaatggtcaaaaacaactatttgaagactccataaattgtccaaaatcatgcaacaaattgagatgtatttattcaggaaaagcctccaggaaggacagtgggagtctggggcatttatatcgggagctgctcccttcccctactaccttccagctttgttagcatggtagatacttgaaggtaggacaagctgcgaaaaatagcagctttgctgttggagggaggatcacttagtttgaagtggtgcactaaacagctctatgtccaggggcattattgaaaatagtcgcaatctctgtggcaaacaaatagggaaggtcaacgacatagctatcctaagcatgaggtcctagccagagcaagcaacaaagtggcaaactagctagaaaatgaacaagaagattggggaatgagatgatagtactgggacttgataagttcctctctgtctctcgaaatttggaaggctgcacagatgcacatgtataggagaaaccagaaagggccctagccatccactcatccctgactgaatatgaaatcttgtgaatgcacagaagaaatgtgagaggtcctgaaagaaagcaaaagctgaaactgacttgtgaactgcctgaattttgaatatgttcccaaacatacagtcaagtcaatgcaaagagggtgaaaatattactgggtcaaggtagttgagcatgttttctgaacaatcattagctaaccactaagctatgctgtcacaagggtgaacccctaagaggctaccgttaagaatgctaaaaagattatttaaaaaaaaaaagaaaagaaaaactgagtagaaacattagagaatgcattctgtcaaaaaaa-gaaaaagaaaaaagaacgaaagaaa--------atgaaaaaagactccacatgtttggtcctggcaaattactaaacacagacaccagcaacaacaatctacaacaacaacaaaaaaatcagaatccagagttggaacaatacattatgtgtaactagacatatgcctagttataagaacaaaaaaa-tacagacatgtaaagaaacaagaaaaggtgccccaagcaaatgggatgaaaaggcagtcaGGAagagaggcagagtaagatggcagaatagaaagttccaccaactcttccctcataaggacaccaatttaactatcgacacagaagaaaaaaaaatacctttataagaaccaaaaatcaggtgagccctcatagtacttggttttaactatgtattgatgaaaaacacactgaagagacagaaaaaacaatcttgaatctccaatgccagcccccaacac---aaccctgggagcagtggcatggtgcagacagcatctctgggtgctggggaagcacagcaattgtgaggcattgacctcagtgctgtcctgttatagcagaaagggaaactggaccaaactcagctgacactcacccaggaagggaacatttaaccagccctagccagagaggaattgctgatcccagcggtcccaacttgagttcccgcaaaccttggcacttaaggccaaagtgctctgtgtctccaaataaacttgaaaggtagcctaggccataaggactgaaagtcttaggtgagtcctagggcttaactgggcccagaagacgatggactttgggggcacatgacatactgagacattagctgggacagccaagagagtgttgacatcaccccttctctaaccccaggatgcagagctcacagcttgaaaatagttcccatccttccacttgaagagaagagaggaagagtgtggatgactttgtcttgcattttggatactagctcagccacagcaggatggggcactagttagagttgtaagtccttcaatacaggccttagctcccagaccacatttctagacatggcctgagccagaaaataaatcctctgccttgaagtcaagaaacaagtcctgacaacatttatcacctaactgaagaatggttgggccctgaacaaccagatctacacccagatactatgtcaagggccttgggtgagcctctgaggcttactggcttcaggtgagattcaacatattaccagcagtggtggtgaagggatgaaattccttctacttgagaaaagcagaggaaaaagtaaaggagactttgtcttgcacctcaggtactaactcaaccacggcagggtagagcaccaagcaggctcctgggca-------ggggggaggtccccgatttcagcactggattcttggacagcatctctggacctgccctgggctggaggggagcttcctgccctaaaggttgagtcccaggccagggaaaattcacaataagctgacttaacccttgagctttaaggaaatatcagtggtgtctggcagaatgcttgatgggactgtggtgggagaggcttctctgcctttgggaaaataagggaagagtgggaagcactgtgtcttgtggtttgagtgccagctcaggtgcagtacaatagaacaccaggtagacttctaaggtttttgcctctagaccccaactccaaggtggcatctctggacccaccttaggcctggggaaagtcaccatctttaatggaagaacacatggctggctgactctgccacctgctgattgtataaccccagaaccttgagcaaacaaaggcagtacacaggaaatggatacagcaggctttgggggagaaccagtgttgtgctggcttcaggtctgactcagtgcagtcatagtgatggtggcttgtgtcattccatctccagctttagaaggctcagaacagggagacatactctgttaggaagaaagggaagagaataagagtctctgcctggtaatccagagaatcctgctgaatcttgtataagaccattaaagcaatacctctatgagtctgcaagaactacagcattactggcttggaatgaccccataaaacagataaagtttagatcataacacccaagtcctttcaaatattttgaaaacctgcccaataaggaagggtacaaacaattccagactgagaagactacaatgaatacataactcttcaatgcccagacacagagaaacctctgcaggtatcaaggcattccaggaaagcatgacatcaccagatgaactaaataagtcaccaggaacgaatactggagaaacagagatatgtgaccttttagacacaggattcataatggccgttttaaggacactcaaataaattcaagataacacaaagaaggaattaagaattctattagaaaaatttaacagagattaaaataatttgaaggaattaagaagaagttctggagctgaaaaatgcaattggcacactgaagaatgcactagagtcctttagtagcagaattgatcaagcagaaagaagaattagtgagcttgaagacagtttatttgaaaacacacagtcaggggagaaaaaaaggaaaaaagaatgaacaataaagcacacctacaggaaggaaagaaagaagaatacaccatgaaaaaaccagaaagcacatttaaaaaatggcaggagtaagtccttacttatcaataataacattgaatgtaagtggattaaatcctttaatcaaaagacatagacggaatgaaaaaaa-gactgaatgaatgaaaaagcaagacccattgatctgttgccatcaagaaatacatttcacccatgaagacacacatagactgaaaataaagggatggaaaaagatacttcatagctaaaaaaaaagaacatgagtagctataattatattagataaaatagattttgagacaaaaactataagagaaaaatgtcactatacaataataaagtggcaaattcaacaagagaatataacaactttaaatatatatgtacccaacattacagcacctagatgtataaagaaaatactattagagctaaagagagatgggccccaatacactaatagctggagatttcaacactccactttcagcattgaacagatcttccagatacaaaatcaacaaagaaacgtcatactcagtcttcactaaagaccaaatgggtctaatagatatttacagaacatttcattcagtggctgcagaatacacattttttctcagcacaagaattattctcaaaaaacaggccatacattagatcacaaaacaaggtttaaaactcacaatgaaataaaattagaaattgaaaacaagaggaattttggaaactgtacaaatacatgggtacaaaccaatgcattcctgaatgtccagtgaatcaacaaagaaatgaagaaagaaactaaaaaatgtcttgaaacagatgataatggaaaaacaacatcctaaacctatgattagggttacagcaaaagcaatattaagactctgtcttttgtaaatagcccagtcttgagtatgtctttattagcagaatgaaaatggactaatacagtgaattgctgctggtagagtggggcattgctaaaaaggtacccaaaaatgtagaagcaaatttggaacttggtaacaggaagaggttggaacagtttgggtggctcagaagaagactggaaaatgtgggaaagtttggaacttcctacagacttgttgaatggctttgcccaaaatgctgatagtgatatggacaataaaatccaggcagaggtggtcccagatgaacaagaggaatttgttggaaactggagcaaaagtgacttatgttatagcaaagagactggtggcattttgctcctgccctagagatttgagaaactttgaacttgagagaaatgattttgggtatctggtagaagaaatttctaagcagaaaagcattcaagaggtgacttgagtgctgttaaaggcattcagctttgtaagggaagcagagcatataagttcagaaaatttgcagcctgacaatgtgatagaaaaaaaaaagtcccattttctgaggagaaattcaagccagctgcagatatttgcataagtaatgagaagctgaacgttaattcccaagacaatggggaaaatgtctccagggcatatcagaggtcttcacagcagccctggaagccaaggaagaaaagatgacttcatggaccaggctaagagtcccaatgctgggtgcagtctacggacttggtgccctgcatcccagctgctccagctgtgactaaaaggggccaagctacagttcaggccatggcttcagagggttgaagccccatctattggcagcttgcacatggtgttgagcctgtgggtgcacaggagtcgagaattaaggtttggaaacctccacctatatttcaggagatgtatggaaatgcctggatgcccaggcaaaagtt-gctgcaggggtggggtgctcttgggggacctctgctagggcagtgcagaagggaaatgtggggatgaagccccccacacagagtccccattggggcactgcctagtggagctgtgagaagaggtccaacatccttcagaccccagaatggtagatccacctacagtttgGtagaccaagcagaagaaaagatatcagagcttgaatactatcttgatgaaataaggcaggcagacaagattagaggaaaaagaaagaaaaggagcaaacaaaactgctgagaactatgagattatgttacaggatggaacttacaactaataggggtatgtaaaagagatggagaaaacagaaccaagttggaaacacactttagaatcatccaggagaacttcccgaacctagcaagacaggccaacattcaaattcaggaaatccagagaacctcagtaagatacaccatgagaaaatcagtctcaagacacacaatcatcagattctctaaggtcaaaatggggaaaaaaaaaaaaaaaa-gcagttacgtgcagccagaaagacaggccaggtcacttataaagggaatcccatcagactaacagcaaaactcccacaagccaaaagggattgggggccaatattcaacattcttaaagaaaagaatttccagcctagaatttcatgtctggtctaagtttcataagcaaaggagaaataaaatcttttttagacaagcaaatgctgaggaaatttattaacaccaggactgcctggctcctgaaggaagcattaaatatggaaaagaaaaatctttaccaggcactacaacaacacactgaggtacacaaactaatgatactatgaagcaactacataaacaagtctgcaaaataaccagctagcatcatgatgacagattccaactcacacataacaatatttaccttaaatgtaaatgggcaaaatgccc i panTro4.chr21 I 921 C 0 e rheMac3.chr3 168617658 8333 - 198365852 I e ponAbe2.chr21 17006639 19163 + 48394510 I e chlSab2.chr2 15065938 6798 - 90373283 I e macFas5.chr3 162281285 7122 - 192294377 I e papAnu2.chr3 150976372 6857 - 180432695 I e nomLeu3.chr25 4502122 12816 + 32716333 I a score=1119.000000 s hg38.chr21_KI270874v1_alt 140237 4 + 166743 caat s panTro4.chr21 3755068 4 + 32799110 caat i panTro4.chr21 C 0 C 0 s macFas5.chr3 162288407 4 - 192294377 caat i macFas5.chr3 I 7122 C 0 e rheMac3.chr3 168617658 8333 - 198365852 I e ponAbe2.chr21 17006639 19163 + 48394510 I e chlSab2.chr2 15065938 6798 - 90373283 I e papAnu2.chr3 150976372 6857 - 180432695 I e nomLeu3.chr25 4502122 12816 + 32716333 I a score=2116.000000 s hg38.chr21_KI270874v1_alt 140241 25 + 166743 taaaagacacagaatgaca--agctgg s panTro4.chr21 3755072 25 + 32799110 taaaagacacagaatgaca--agctgg i panTro4.chr21 C 0 C 0 s macFas5.chr3 162288411 20 - 192294377 ---aaaaa--aaaaTAACAGTAACA-- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150983229 25 - 180432695 taaaaaaattaaaataacagtaaca-- i papAnu2.chr3 I 6857 C 0 e rheMac3.chr3 168617658 8333 - 198365852 I e ponAbe2.chr21 17006639 19163 + 48394510 I e chlSab2.chr2 15065938 6798 - 90373283 I e nomLeu3.chr25 4502122 12816 + 32716333 I a score=1321241.000000 s hg38.chr21_KI270874v1_alt 140266 1574 + 166743 ataaagagttaagatccattggtgtgctgtattcaagagacccatctcaaatgcaaacacacacatagactcaaaataaaagaatggaggaaaatttaccaagcaaatggaaaacagaaaaaagcaggggttgatatcctagtttatgacaaaatagacattaaaccaacaaagatcaaaaaagacaaagaaaagaattatataataaaacaggtgtcaatttaacaagaaaagctaactatcataaatatatatgcctccaatacaggagcacccagattcac-aaaacaagttcttagagacctacaaagagatttagactcccacacaataatagtgggtgactttaacaccccactgacaatattatacagaaaattaacaatgatattcaggacttgaactcagctctggaaccagtggacctgatagatatctacagaactctccaccccaaaacaacagaatatacattatttttggtgccacatggcacttattctaaaattggttacataattaacagtaaatcattcctcagccaatgaaaaagaactaaaatcat----aacagtctctcagaccacagtgcaatcaaattagaactcaagattaagaaactcactcaaaaccacacaactacatggaaattgaacaaactgcttttgaatgacttctgggtaaataatgaaattaaggcagaaatcaagaagttctttgaaaccaatgagaacaaagagacaatgtaccagaatctctgggatgcaactaaggcagtgttaagaggaaatattatagtactaaatgcctatatcaaaaagctagaaagatctcaaatcaaaactctaacataacaactaaaaccaagagcaaaaaaaaa-cacctcaaagctagcagaagacaagaaataaccaagctcagagcataactgaatcagatagagacatgaaaaacccttcaaaagaaatcaatgaatacagaagctgt-ttttttgaaaaaaaaaaaaa-------gacatagactgctagctagactaataaagaagaaa--agagaagaatcaaataaacacaataaaaactgataaagggaacattgccactga-tccacagaaatacaaacaatcctcacagaatactataaacacctctatgcaaataagctagaaaatctagaagaaatttataaattcctggacatatacaacctcccaagactgaaccaggaagaagtcgaatccctgaatagaccaataacatgttctgaaattgaggcagtaataaataacctatgaaccaaaaaaagccc--aggatcagatggatttacagccgaattttaccagaagtacaaagaggacctgacaccctttcttctgaaactattccaaataattgaaaaggagagactcctccctaac-tgttctatgaggccagaatcatcctgataccaaaacctggcagagacaaaacaaaaatagaaaacttcaggccagtatccctaatgaacactgatgcaaaaattctcaataaaacactggtaaagcaaataaagcagtacatcaaaaagcttatccaacatcatcaagtt s panTro4.chr21 3755097 1575 + 32799110 ataaagagttaagatccattggtgtgctgtattcaagagacccatctcaaatgcaaacacacacaaagactcaaaataaaagaatggaggaaaatttaccaagcaaatggaaaacagaaaaaagcaggggttgcaatcctagtttctgacaaaatagacattaaaccaacaaagatcaaaaaagacaaagaaaggaattatataataaaa-aggtgtcaatttaacaagaaaagctaactatcctaaatatatatgcctccaatacaggagcacccagattcac-aaaacaagttcttagagacctacaaagagatttagattcccacacaataatagtgggtgactttaacaccccagtgacaatattatacagaaaattaacagcaatattcaggacttgaactcagctctggaacaagtggacctgatagatatctacagaactctccaccccaaaacaacagaatatacattctttttggtgccacatggcacttattctaaaattggtcacataattaacagtaaatcattcctcagccaatgaaaaagaattaaaatcat----aacagtctctcagaccacagtgcaatcaaattagaactcaagattaagaaactcactcaaaaccacacaactacatggaaattgaacaaactgcttttgaatgactcctgggtaaataatgaaattaaggcagaaatcaagaagttctttgaaaccaatgagaacaaagagacaatgtaccagaatctctgggatgcaactaaggcagtgttacgaggaaatattatagcactaaatacccatatcaaaaagctagaaagatctcaaatcaacaccctaacataac---taaaaccaagagcaaaaaaaaaacatctcaaagctaggagaagacaagaaataaccaagctcagagcataactgaatcagatagagacatgaaaaacccttcaaaagaaatcaatgaatacagaagctgt-ttttttgaaaaaaaaaaaaa-----aagacatagactgctagctagactaataaagaagaaaggagagaagaatcaaataaacacaataaaaactgataaagggaacatcaccactgc-cccacagaaatacaaacaatcctcatagaatactataaacacctctatgcaaataagctagaaaatctaggagaaatttataaattcctggacatatacaacctcccaagactgaaccaggaagaagtcgaatccctgaatagaccaataacaagttctgaaattgaggcagtaataaataacctatgaaccaaaaaaagccc--aggatcagatggatttacagccgaattttaccagaagtacaaagaggacctgataccctttcttctgaaactattccaaataattgaaaaggagagactcctccctaac-tgttctatgaggccagaatcatcctgataccaaaacctggcagagataaaacaaaaatagaaaacttcaggccagtatccctaatgaacactgatgcaaaaattctcaataaaacactggtaaagcgaataaagcagtacatcaaaaagcttatccaacatcatcaagtt i panTro4.chr21 C 0 C 0 s macFas5.chr3 162288431 1581 - 192294377 ataaagagttaagatccattggtgtgctatagtcaagagacccgtctcaaatgcaaaaacacacatggactcaaaataaaaggatggaggaaaatttaccaagcaaatggaaaacagaaaaaagcaggggttgaaattctagtttctgacaaaatagacattaaaccaacaaagatcgaaaaagacaaagaaaggaactatataacagcaaaggtgtcaatttaaaaagaaaagctaactatcctaaatatatatgcatccaatacaggagcacccagattcac-aaaacaagttcttagagacctagaaagagatttagactcccacaaaataatagtaggtgactttaacatcccactgacaatattatacagaaaattaagtatgctattcaggacttgaactcagctctggatcaggtggacctgatagatatctacagaactctgcaccccaaaacaacagaatatatattctttttggtgccacatggcacttattctaaaattggtcacataattaacagtaaatcactcctcagccaatgaaaaagaactaaaatcataacaaacagtctcttagaccacagtgcaatcaaattagaactcaagattaagaaactcactcaaaaccacacaactacatgggaattgaacaaactgcttttgaatgactcctgggtaaagaatgaaattaagacagaaatc---aagttctttgaaaccaatgagaacaaagagacaatgtaccagaatctctgggatgcaactaaggcagtgttaagaggaaatattatagcactaaatg-ccatatcaaaaagctagaaagatctcaaatcaacaccctaacataacagctaaaaccgagagcaaaaaaaa--cacctcaaagttggcagaagacaagaaacaaccaagctcagagcataaatgaatgagacagagacatgaaaaacccttcaaaaaaaatcaatgaccacagaagctggtttttttgaaaaataaaataaaataaaagaggtagactgctagctagactaataaagaag-----acagaagaatcaaataaacacaataaaaactgataaagggaacatcaccactgcccccacagaaatacaaacaatcctcacagaatactataaacacctctatgtaaataaactagaaaatctggaagaaa-ttataaattcctggacacatacaacctcccaagactgaaccaggaagaagttgaatccctgaatagaccaataacaaattctgaaattgagacagtaataaatagcctatgaaccaaaaaaaaaaaagaggatcagatggatttacagccaagttttaccagaagcacaaagaggatctgataccctttcttctgaaattattccaaataattgaaaaggagagactcctccctaacacattctatgagaccagcatcatcctgataccaaaacctggcagagatacaacaaaaatagaaaacttcaggccaatatccttaatgaacattgatgcaaaaattatcaataaaatgctggcaaagtgaataaagcaacacatcaaaaagcttatccaaaatgatcaagtt i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150983254 1582 - 180432695 ataaaGAGTTAAGATccattggtgtgctatattcaagagacccatctcaaatgCAAAAACACACATggactcaaaataaaaggatggaggaaaatttaccaagcaaatggaaaacagaaaaaagcagaggttgcaatcctagtttctgacaaaatagacattaaaccaacaaagaatgaaaaagacaaagacaggaaCTATATAACAGCAAAGgtgtcaatttaaaaagaaaagctaactctcctaaatatatatgcatccaatacaggagcacccagattcacaaaaacaagttcttagagacctagaaagagatttagactcccacacaataatagtgggtgactttaacatcccactgacaatattatacagaaaattaagtatgatattcaggacttgaactcagctctggatcaggtggacctgatagatatctacagaactctccaccccaaaacaacagaatatatattctttttggtgccacatggcacttattctaaaattggtcACATAATTAACAGTAAATCACTCCTCAGACaatgaaaaagaactaaaatcataacaaacagtctcttagaccacagtgcaatcaaattagaactcaagattaagaaactcactcaaaaccacacaactgcatggaaattgaacaaaCTGCTtttgaatgactcctgggtaaagaatgaaattaaggcagaaatcaagaagttctttgaaaccaatgagaacaaagagacaatgtaccagaatctctgggatgctactaaggcagtgttaagaggaaatattatagcactaaatgcccatatcaaaaacccagaaagatctcaaatcaacaccctaacataaCAGCTAAAACCGAGAGCaaaaaaaa--cacctcaaagctagcagaagatgagAAACAACCAAGCTCAGAGCATAACTGAatgagacagagacatgaaaaacccttc-aaacaAATCAATGACcacagaagctgg-ttttttgaaaaataaaataaaataaaagaggtagactgctagctagactaataaagaag-----agagaagaatcaaataaacacactAAAAACTGATAAAGGGAACATCACCACCActcccacagaagtacaaacaatcctcacagaatactataaacacctctatgtaaataaactagaaaatctggaagaaa-ttataaattcctggacacatacaacctcccaagactgaaccaggaagaagttgaatccctgaatagaccaataacaaattctgaaattgagacagtaataaatagcctatgaaccaaaaaaaaaaa--aggatcagatggatttacagccgAGTtttaccagaagtacaaagaggatctgataccctttcttctgaaattattccaaataattgaaaaggagagactcctccctaacacattctatgagaccagcatcatcctgataccaaaacctggcagagatacaacaaaaatagaaaacttcaggccaatatccttaatgaacattgatgcaaaaattatcaataaaatgctggcaaagtGAATaaagcaacacatcaaaaagcttatccaaaatgatcaagtt i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15072736 1583 - 90373283 ataaagagttaagatccattggtgtgctatattcaagagacccatctcaaatgcaaaaacacacatggactcaaaataaaaggatggaggaaaatttaccaagcaaatggaaaacggaaaaaagcaggggttgcaatcctagtttctgacaaaatagacattaaaccaacaaagatcgaaaaagacaaagaaaggaactatataacagcaaaggtgtcaatttaaaaagaaaagctaactatcctaaatatacatgcatccaatacaggagcacccagattcac-aaaacaagttcttagagacctagaaagagatttagactcccacacaataatagcgggtgactttaacatcccactgacaatattatacagaaaattaagtatgatattcaggacttgaactcagctctggatcaggtgaacgtgatagatatctacagaactctccaccccaaaacaacagaatacatattctttttggtgccacatggcacttattctaaaattggtcacataattaacagtcaatcactcctcagccaatgaaaaagaactaaaatcataacaaacagtctcttagaccacagtgcaatcaaattagaactcaagattaagaaactcactcaaaaccacacaactacatggaaattgaacagactgcttttgaatgactcctgggtaaagaatgaaattaacacagaaatcaagaagttctttgaaaccaatgagaacaaagagacaatgtaccagaatctctgggatgctactaaggcagtgttaagaggaaatattatagcactaaatgcccatatcaaaaacctagaaagatctcaaatcaacaccctaacataacagctaaaaccgagagcagaaaaaa--cacctcaaagctagcagaagatgagaaacaaccaagctcagagcataactgaatgagacagagacatgaaaaacccttcaaaaaaattcaatgaccacagaagctag-ttttttgaaaaataaaataaaataaaagaggtagactgctagctagactaataaagaag-----agagaagaatcaaataaacacaataaaaactgataaagggaacatcaccactacccccacagaaatacaaacaatcctcacagaatactataaacacctctatgtaaataaactagaaaatctggaagaaa-ttataaattcctggacacatacaacctcccaagactgaaccaggaagaagttgaaaccctgaatagaccaataacaaattctgaaattgagacagtaacaaatagcctaggaaccaaaaaaaaaaa-gaggatcagatggatttacagccgagttttatcagaagtacaaagaggatctgataccctttcttctgaaattattccaaataattgaaaaggagagactcctccataacacatgctatgaggccagcatcatcctgataccaaaacctggcagagatacaataaaaatagaaaacttcaggccaatatccttaatgaacattgatgcaaaaattatcaataaaatgctggcaaagtgaataaagcaacacatcaaaaagcttatccaaaatgatcaagtt i chlSab2.chr2 I 6798 C 0 e rheMac3.chr3 168617658 8333 - 198365852 I e ponAbe2.chr21 17006639 19163 + 48394510 I e nomLeu3.chr25 4502122 12816 + 32716333 I a score=697159.000000 s hg38.chr21_KI270874v1_alt 141840 558 + 166743 ggcttcatcattgggatgcaagactggttcagcatatgcaaatcaataaaaaaaattcatcacataaacagatctaaagacaaaaaccacatgattatctcaatagatgcacaaaaagcctttggtaaaattcaacatcccttcatgttaaaaactctcaataaactaggtattaaaggaacatacctcaaaataat--gagtcatttattacaaacccacagccaatatcatactgaatgggcaaaacctggaagcattccccttggaaatcagcacaagacaagtatgccctctctcactactccttttcaacacaatattggaagttctcaccagggcaatcgggcaacagaaagaaataaaagtattcaaataggaagagaggaagtcaaactgtctctgtttgcagatgacataatcctatatctagaaaaccccatcatctcaggccaaaagcttcttaagctgataagcaatgccagcaaagtctcaggatacaaaatcaatgtgcaaaag-cacaagcatttctatacaccaacaacaggcaagcagagagcc s panTro4.chr21 3756672 553 + 32799110 ggcttcatcattgggatgcaagactggttcagcatatgcaaatcaataaacaaaattcatcacataaacagatctaaagacaaaaaccacatgattatctcaatagatgcacaaaaagcctttggtaaaattcaacatcccttcatgttaaaaactctcaataaact-ggtattaaaggaacatacctcaaaataat--gagtcatttatgacaaacccacagccaatatcatactgaatgggcaaaagctggaagcattccccttggaaatcagcacaagacaaggatgccctctctcaccactccttttcaacacaatattggaagttctcaccagggcaatcaggcaacagaaagaaataaaagtattcaaataggaagagaggaatta----tgtctctgtttgcagatgacataatcctatatctagaaaaccccatcatctcaggccaaaagcttcttaagctgataagcaatgccagcaaagtctcaggatacaaaatcaatgtgcaaaag-cacaagcatttctatacaccaacaacaggcaagcagagagcc i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 17025802 554 + 48394510 ggcttcatcattgggatgcaagactgg-tcagcatatgcaaatcaataaacaaaattcatcacat-aacagatctaaagacaaaaa-cacatga-tatctcaatagatgcacaaaaagcctttggtaaaattcaacatcccttcatgttaaaaactgtcaataaactaggtattaaaggaacatacctcaaaataat--gagtcatttatgacaaacccacagccaatatcatactgaatgggcaaaagctggaagcattccccttgaaaatcagcacaagacaaggatgccctctctcaccactccttttcaacataatgttggaagttctccccagggcaatcaggcaacagaaagaaataaaagtattcaaataggaagagaggaagtcaaactgtctctgtttgcagatgacataatcctatatctagaaaaccccatcatcttaggccaaaagcttcttaagctgataagcaatgtcagcaaagtctcaggatacaaaatcaatgtgcaaaag-cacaagcatttctatacaccaacaacaggcaagcagagagcc i ponAbe2.chr21 I 19163 C 0 s macFas5.chr3 162290012 559 - 192294377 ggcttcatccttgggatgcaagactggttcggcatatgcaaatcaataaacaaaatccatcacacaaacagatataaagacaaaaaccacatgattatctcaatagatgcagaaaatgcctttgataaaattcaacatcccttcatgttaaaaactctccataaactaggtattaaaggaatatacctcaaaataat--gagtcatttatgacaaacccacaaccaatatcatactgaatgggcaaaagctggaagcattccccttggaaatcagcacaagacatggatgccctctctcaccactccttttcaacataatattggaagttctggccagggcaatcaggcaagagaaagaaataaaggtattcaaataggaagagaggaagtcaaactgtctctgtttgcagatgacataaacctatatctagaaaaccccatcatctcacgccaaaagcttcttaacctgataagcaatgccagctaagtctcacgatacaaaatcaatgtgcaagagtcacaagcatttctatacaccaacagcagtcaagcagagagtc i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150984836 558 - 180432695 ggcttcatccttgggatgtaAGACTGGTTctgcatatgcaaatcaataaacaaaatccatcacacaaacagatataaagacaaaaaccacatgattatctcaatagatgcagaaaatgcctttgataaaattcaacatcccttcatgttaaaaactctccataaactaggtattaaaggaatatacctcaaaataat--gagtcatttatgacaaacccacaaccaatatcatactgaatgggcaaaagctggaagcattccccttggaAATCAGCAGAAGAcacggatgccctctctcaccactccttttcaacataatattggaagttctggccagggcaatcaggcaagagaaagaaataaaggtattcaaataggaagagaggaagtcaaactgtctctgtttgca-atGACATAaacctatatctagaaaaccccatcatctcatgCCAAAAGCttcttaacctgataagcaaTGCCAGctaagtctcaggatacaaaatcaatgtgcaaaagtcacaagcatttctatacaccaacagcagtcaagcagagagcc i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15074319 560 - 90373283 ggcttcatccttgggatgcaagactgggtcagcatatgcaaatcaataaacaaaattcatcacacaaacagatataaagacaaaaaccacatgattacctcaatagatgcagaaaatgcctttgataaaattcaacagcccttcatgctaaaaactctcaataaattcagtattgatggaatatatctcaaaataataagagccatttatgacaaacccacagccaatatcatactgaatgggcaaaagctggaagcattccccttgaaaatcagcacaagacatggatgccctctctcaccactccttttcaacataatattggaagttctggccc-ggcaatcaggcaagagaaagaaataaaggtattcaaacaggaagagaggaagtcaaactgtctctgtttgcagatgccataatcctatatctagaaaaccccatcatctcacgccaaaagcttcttaacctgataagcaatgccagctaagtctcaggatacaaaatcaatgtgcaaaagtcacaagcatttctacacaccaacagcaggcaagcagagagcc i chlSab2.chr2 C 0 C 0 e rheMac3.chr3 168617658 8333 - 198365852 I e nomLeu3.chr25 4502122 12816 + 32716333 I a score=1336089.000000 s hg38.chr21_KI270874v1_alt 142398 808 + 166743 aaatcatgaatgaacttccattcacaattgctacaaagagaataaaatacctaggaataaagctaacaagggaattgaaggccctcctcaagaagaactacaaatgactgctcaaggaaatcagaaaggacacaagcagatggaaaagcattccatgctcatggatag-aagaatcaatatcatggaaatggccatagtacccaaaataatttatagattcaatgctattcccattaaactaccattgatattcttcagagaattcttagaaattcttagaaaaagcta----------ttttaaaattcatatggaaccagaaaagagttcatatagccaagaaaatcctaagcaaaaggaacaaagctggaggcatcatgctaccagacttcaaactatactacaaggctacagtaaccaaaacggcatgatattggtacaaaaacagatatataaaccaatgtgaaataatagagaactcagaagtaagaccacacatatacaaccacctgatcttcaacaaccccaacaaaaacaagcaatggggaaaggattc-----cctatttaataaatggtgctgggagaactggctagccgtatgaataaaattgaaactgtaccccttccttacaccttatac-aaaaattaacttaagatgggttaaatatttaaatataaaacccaaagctataaaagcactacaagaaaatctaggcaataccattcaggacataggcacaggcaaagatttcatgacaaaa-tcgccaaaagcaattgtgacaaaagcaaaagttgacaaatgggatctaattaaactaaa s panTro4.chr21 3757225 808 + 32799110 aaatcatgaatgaacttccattcacaattgttacaaagagaataaaatacctaggaataaagctaacaagggaattgaaggccctcttcaagaagaactacaaatgactgctcaaggaaatcagaaaggacacaagcagatggaaaagcattccatgctcatggatag-aagaatcaatatcatggaaatggccatagtactcaaaataatttatagattcaatgctattcccattaaactaccattgatattcttcagagaattcttagaaattcttagaaaaagcta----------ttttaaaattcatatggaaccagaaaagagttcatataaccaagaaaatcctaagcaaaaggaacaaagctggaggcatcaggctaccagacttcaaactatactacaaggctacagtaaccaaaacggcatgatattggtacaaaaacagatatataaaccaatgtgaaataatagagaactcagaagtaagaccacacatatacaaccacctgatcttcaacaaacccaacaaaaacaagcaatggggaaaggattc-----cctatttaataaatgatgctgggagaactggctagccatatgaataaaattgaaactggaccccttccttacacattatac-aaaaattaacttaagatgggttaaatatttaaatataaaacccaaagctataaaagcaatacaagaaaatctaggcaataccattcaggacataggcacaggcaaagatttcatgacaaaa-tcgccaaaagcaattgtgacaaaagcaaaagttgacaaatgggttctaattaaactaaa i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 17026356 809 + 48394510 aaatcatg-atgaacttccattcacaattgctacaaagagaataaaatacctaggaataaagctaacaggggaatttaaggccctcttcaagaagaactacaaatgactgctcaaggaaatcacaaaggacacaagcagatggaaaaacattccatgctcatggatagaaagaatcaatatcatggaaatggccatagtgcccaaagtaatttatagattcaatgctattcccattaaactaccattgatatttttcagagaattcttagaaattcttagaaaaagcta----------ttttaaaattcatatggaaccagaaaagagttcatatagccaagaaaatcctaagcaaaaagaacaaagctggaggcatcatgctaccagacttcaaactatactacaaggctacagtaatcaaaacagcatgatactggtacaaaaacagatatataaaccaatgtaaaataatggagaactcagaagtaaacccacacatataaaaccacctgatcttcaataaacccaacaaaaacaagcaaaggggaaaggattc-----cctatttaacaaatagtgctgggagaactggctagccatatgaataaaattgaaactgcaccccttccttacaccttatac-aaaaattaacttaagatgggttaaagatttaaatgtaagacccaaagctataaaagcactacaagaaaatctaggcaataccattcaggatataggcacaggcaaagatttcatgacaaaagtcaccaaaagcaattgcaacaaaagcaaaagttgacaaatgggatgtaattaaactaaa i ponAbe2.chr21 C 0 C 0 s rheMac3.chr3 168625991 787 - 198365852 aaatcatgaatgaacttccattcacaattgctacaaagagaataaagtacctaggaatagagctaacaagggaattgaaggacctcctcaagaagaactacaaac-----------------------gacacaagcagatggaaaaacattccatgctcatggatagaaaggatcaatatcatggaaatggtcatagtgcccaaagtaatttatagattcaatgctattcacattaaactaccattgacattcttcacagaa-------------ttagaaaaaaaaaaaaaaaaactttttaaaattcatattgaaccagaaaagagttcatatagccaagaaaatcctaaagaaaaagaacaaagctggaggtattatgctaccagacttcaaactatactac-aggctacagtaaccaaaacaacatggttttggttactaaacagacacacagaccaatggaacagattagagaacccaaaaataagatcacacatctacaactatctgatcttcaacaaacctgaccaaaaaaagcaatggggaaaggattccctgtcctattcaataaatggtgctagagtaactggctagccatacgcagaaaattgaaactggacccctttcttacagtatctac-aaaaatcaactcaaaagaggttaaagacttaaatgtaaaactcaaagctataaaagcactacaagaaaatctaggcagtgccattcaggacataggcacaggcaaagatttcatgacaata-tggccaaaagcaattgcaacaaaagcaaaagttgacaaacgggatctaattaaactaaa i rheMac3.chr3 I 8333 C 0 s macFas5.chr3 162290571 772 - 192294377 aaatcatgaatgaacttccattcacaattgctacaaagagaataaagtacctaggaatagagctaacaagggaattgaaggacctcctcaagaagaactacaaac-----------------------gacacaagcagatggaaaaacattccatgctcatggatagaaaggatcaatatcatggaaatggtcatagtgcccaaagtaatttatagattcaatgctattcacgttaaactaccattgacattcttcagagaa-------------ttagaaaaagcta----------ttttaaaattcatattgaaccagaaaagagttcatatagccaagaaaatccgaaagaaaaagaacaaagctggaggtattatgctaccagactccaaactacactac-aggctacagtaaccaaaacaacatgatactgatacaaaaacagatatatagaccaatgtgaaagaatagagaactcagaaataagaccgcacatatacaaccacctgatcttcaacaaacctgacaaaaacaagcaatggggaaaggattc-----cctatttaataaatggtgctaggagaactggctagccatatgaataaaattgaaactggaccccttccttacaccttatac-aaaaattaacttaagatgggttaaagacttaaatgtaaaactcaaagctataaaagcactacaagaaaatctaggcagtgccattcaggacataggcacaggcaaagatttcatgacaata-tggccaaaagcaattgcaacaaaagcaaaagttgacaaacgggatctaattaaactaaa i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150985394 773 - 180432695 aaatcatgaatgaacttccattcacaattgctacaaagagaataaagtacctaggaatagaGCTAACAAGGGAattgaaggacctcttcaagaagaactatgAAC-----------------------GACACAagcagatggaaaaacattccatgctcatggatagaaaggaTCAATATCATGGAAATGGTCatagtgcccaaagtaatttatagattcaatgctattcacattaaactactattgacattcttcagagaa-------------ttagaaaaagcta----------ttttaaaattcatattgaaccaGAAAAGAGTtcatatagccaagaaaatcctaaacaaaaagaacaaagctggaggtattatgctaccagacttcaaactatactac-aggctacagtaaccaaaacaacatgatactgatacaaaaacagatatatagaccaatgtgaaagaatagagaactcagaaataagatcacacatatacaaccacctgatcttcaacaaacctgacaaaaacaagcaatggggaaaggattc-----cctatttaataaatggtgctaggagaactggctagccatatgaataaaattgaaactggaccccttccttacaccttatacaaaaaattaacttaagatgggttaaagacttaaatgtaaaactcaaagcTGTAAAAGCACTACAAGAAAATCTAGGCagtgccattcaggacataggcacaggcaaagatttcatgacaaaa-tggccaaaagcaattgcaacaaaagcaaaagttgacaaatgtaatctaattaaactaaa i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15074879 795 - 90373283 aaatcatgaatgaacatctattcacaattgctacaaagagaataaagtacctaggaatagagctaacaagggaattgaaggacctctttaagaaaaactacaaacaactgctgaaggaaatcagaaaggacacaagcagatggaaaaacattccatgctcatggatagaaagtatcaatatcacggaaatggtcatagtgcccaaagtaatttatagattcaatgctattcccattaaactaccattgacattcttcagagaa-------------ttagaaaaagcta----------ttttaaaattcatattgaaccagaaaagagttcatatagccaagaaaatcctaaacgaaaagaacaaagctggaggtattatgctaccagactttaaactatactac-aggctacagtaaccaaaacaacatgatactgatacaaaaacagatatatagaccaatgtgaaagaatagagaactcagaaataagaccacacatatacaaccacctgatcttcaacaaacctgaccaaaacaagcaatggggaaaggattc-----cctatttaataaacggtgctaggagaactggctagccatatgaataaaattgaaactggaccccttccttatacgtcatac-aaaaattaacttaagataggttaaagacttaaatgtaaaactcaaagctataaaagcactacaagaaaatctaggcaataccattcaggacataggcacaggcaaagatttcatgacaaaa-tggccaaaagcaattgcaacaaaagcaaaagttgacaaacgggatctaattaaactaaa i chlSab2.chr2 C 0 I 149 e nomLeu3.chr25 4502122 12816 + 32716333 I a score=161396.000000 s hg38.chr21_KI270874v1_alt 143206 151 + 166743 agagcttctgcacagcaaatgaaactatcatctgagtgaacaagcaacctaaaaaatgagagaaaatttttgaaatctatcaatctggcaaaggtctaat-tccagaatctacaaggaacttaaacaaatttacaaaaaacaaaa---------------aaaacaa s panTro4.chr21 3758033 149 + 32799110 agagcttctgc-cagcaaatgaaactatcatccgagtgaacaagcaacctaaaaattgagagaaaattttttaaatctatcaatctggcaaaggtctaat-tccagaatctacaaggaacttaaacaaatttacaagaaacaaaa---------------aaaa-aa i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 17027165 148 + 48394510 agagcttctgcacagcaaatgaaactatcatccaagtgaacaaacaacctaaaaaatgagagaaaatttttgcaatatatcaatctggcaaaggtctaat-tccagaatctacaaggaacttaaacaaatttacaagaaacaaaa---------------aaaa--- i ponAbe2.chr21 C 0 C 0 s rheMac3.chr3 168626778 144 - 198365852 agagcttctgcacagcaaatgaaattatcatcagattgaacaagcaacctaaaaa-tgggagaaaatttttgcaatctatcaatctgacagaggtctaatatccagaatctacaaggaacttaagtatatttacaagaaaaaaaa---------------------- i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162291343 163 - 192294377 agagcttctgcacagcaaatgaaattatcatcagattgaacaagcaacctaaaaa-tgggagaaaatttttgcaatctatcaatctgacagaggtctaatatccagaatctacaaggagcttaaacaaattcacaagagaaaaaaaaaaaaaaaaaaaaaaaaa--- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150986167 149 - 180432695 agagcttctgcacagcaaatgaaattatcatcagattgaacaggcaacctaaaaa-tgggagaaaatttttgcaatctatcaatctgacagaggtctaatatccagaatctacaaggagcttaaacaaattcacaagaaacgaaa--------------aaaaa--- i papAnu2.chr3 C 0 C 0 e chlSab2.chr2 15075674 149 - 90373283 I e nomLeu3.chr25 4502122 12816 + 32716333 I a score=1333175.000000 s hg38.chr21_KI270874v1_alt 143357 754 + 166743 ccccatcaaaaagtgggcaaagg--aca----tgaacagaagcttctcaaaataagacattcctgcagccaacaaacatatgaaaaaaggctcaacatcactgatcattagagaagtgcaagtcaaaatacaataatataccatctcacaccaaatagattggcaattattaaaaagtcaagaaaccacagatactggcaaggttgtagagaaatagTGcagacataatctgcactgtagaccaaatgcatccaatagatatttacaaaacattttatctaagagctacagaatacataattttttcctcagcatataaatcaatctccagaatagaccataggttaagtcacaaaacaaatcttaaaacatttgaaataatatcaaacatcttctctaaccacaatgaaataaaattagaaaATaataggaatgcttttacactgttggtggaaatgtaagttagttcaaccattatgaaagactgtgcagggattcctcaaagatctagaaccagaaataccatttgacccaccaatcccattactgggtatgtaaccccaaattataaatcattctattacaaagatacatgcacacgtatattgattgcagcactattcacaatagcagggacatggaat-aacccaaatgcccaacaatgctagactggatttaaaaaatatggtacatatacaccatggagtattatgcagccat-aaaaggaatgagatcatgttctctgcaagggcatggatga s panTro4.chr21 3758182 759 + 32799110 ccccatcaaaaagtgggcaaagg--gcaggcatgaacagaagcttctcaaaataagacattcctgcagccaacaaacatatgaaaaaaggctcaacatcactgatcattagagaagtgcaaatcaaaatacaataatataccagcacacaccaaatagattggcaattattaaaaagtcaagaaaccacagatactggcaaggttgtagagacatagtgcagacataatctgcactgtagaccaaatgcatccaatagatatttacaaaacattttatctaagagctacagaatacacaattttttcctcagcatataaatcaatctccagaatagaccataggttaggtcacaaaacaaatcttaaaacatttgaaataatatcaagcatcttctctaaccacaatgaaataaaattagaaaataataggaacgcttttacactgtcggtggaaatgtaaattagttcaaccattatgaaagactgtgcagtgattcctcaaagatctagaaccagaaataccatttgacccaccaattccattactgggtatataaccccaaattataaatcattctattacaaagatacatgcacacgtatattgattgcagcactatacacaatagcagggacatggaatcaacccaaatgcccatcaatgctagactggatttaaaaaatatggtacatatacaccatggagtattatgcagccat-aaaaggaatgagatcatgttctctgcaagggcatggatga i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 17027313 753 + 48394510 --ccatcaaaaagtgggcaaagg--aca----tgaacagacacttctcaaaataagacattcctgcagccaacaaacacatgaaaaaaggctcaacgtcactgatcattagagaagtgcaaatcaaaacacaataagataccgtctcacaccaattagattggcaatcattaaaacgtcaagaaaccacagatactggtgaggttatagaaaaatagTGcagacataatctgcactgtagaccaaatgcatccaatagatatttacaaaacgttttatctaagagctacagaatacacatttttttcctcagcacataaatcaatatgcagaatagacctcaggttaggtcacaaaacaaatgttaaaacatttgaaataatatcaagcatcttctctaaccacaatgaaataaaattagaaaatactaggaatgcttttacactgttggtgggaatgtaaattagttcaaccattgtgaaagacagtgcagtgattcctcaaagatctagaacgaggaataccatttgacccaccaataccattactgggtataaaatctcaaattataaatcattctattacaaagatacatgcacatgtatgttgattgcagcactattcacaatagcagggacatggaatcaacccaaatgcccatcaatgctagactggatttttaaaatgtggtacatatacaccacggagtactatgcagccat-aaaaggaatgagatcatgttctctgcaaggacatggatga i ponAbe2.chr21 C 0 C 0 s rheMac3.chr3 168626922 754 - 198365852 ----atcaaaaagtaggcaacggataca----tgaccagaaacttctcaaaataagacattcctgcagccaacaaacacatgaaaaaatgctcaatgtcattgatcattagagaagtgcaaatcaaaacacagtaagataccatctcacaccaatcagaatgccaattattaaaaagtcaagaaaccacacatgctggtgaggttgtagagaaatagTGcagacataatctgcactgtagaccaaatgcatccaatagatatttacaaaatgttttatctaagagctacagaatacacatttttttcctcagcacataaatcaatctccagaatagaccatatgttaggtcacaaaacaaatcttaaaacatttgaaataatatcaggcatcttctctaaccacagtgaaataaaattagaaaATaataggaaggcttttacactgttggtgggaatgtaaattagttcaaccattgtgaaagacaatgtggtgattgctcaaagatctagaaccagaaatacaatttgacccaccaatcccattactggatatataaccccaaattataaatcgttctattacaaagatacatgcacacgtatgttgattgcagcactattcacaatagcagggacatggaatcaacccaaatgcccatcagtgctagactggatttttaaaatgtggtacatatacaccatggaatactatgcagccataaaaaggaataagatcatgttctttgcaaagacatagatga i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162291506 756 - 192294377 ccctatcaaaaagtgggcaaaag--aca----tgaccagaaacttctcaaaataagacattcctgcagccaacaaacacatgaaaaaatgctcaatgtcattgatcattagagaagtgcaaatcaaaacacagtaagataccatctcacaccaatcagaatgccaattattaaaaagtcaagaaaccacacatgctggtgaggttgtagagaaatagTGcagacataatctgcactgtagaccaaatgcatccaatagatatttacaaaatgttttatctaagagctacagaatacacatttttttcctcagcacataaatcaatctccagaatagaccatatgttaggtcacaaaacaaatcttaaaacatttgaaataatatcaggcatcttctctaaccacagtgaaataaaattagaaaATaataggaaggcttttacactgttggtgggaatgtaaattagttcaaccattgtgaaagacaatgtggtgattgctcaaagatctagaaccagaaatacaatttgacccaccaatcccattactggatatataaccccaaattataaatcgttctattacaaagatacatgcacacgtatgttgattgcagcactattcacaatagcagggacatggaatcaacccaaatgcccatcagtgctagactggatttttaaaatgtggtacatatacaccatggaatactatgcagccataaaaaggaataagatcatgttctttgcaaagacatagatga i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150986316 756 - 180432695 ccctatcaaaaagtgggcaaagg--aca----tgaacagaaacttctcaaaacaagacattcctgcagccaacaaacacatgaaaagaggctcaacgtcactgatcattagagaaatgcaaatcaaaacactgtaagataccatctcacaccaatcagaatggcaattattaaaaagtcaagaaaccaCACACACTGGCGAGGTTGTAGAGAAATAGTGCAGACATAATCTGCACTGTAGACCAAATGTATCcaatagatatttacaaaacattttttctaagggctacagaatatacatttttttcctctacacATAAATCAATCtccagaatagaccatatgttaggtcacaaaacaaatcttaaaacatttgaaatagtATCAGGCATCTTCTctaaccacagtgaaataaaattagaaaataataggaaggcttttacactgttggtgggaatgtaaattagttcaaccatcgtgaaagacagtgtggtgattcctcaaagatctagaaccagaaatacaatttgacccaccaatcctattactggatatataacCCCAAATTATAAATcgttctattacaaagatacatgcacacgtatgttgattgcagcactattcacaatagcagggacatggaatcaacccaaatgcccatcagtgctagactggatttttaaaatgtggtacatatacaccatggaatactatgcagccataaaaaggaataagatcgtGTTCTTTGCaaggacatagatga i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15075823 756 - 90373283 ccctatcaaaaagtgggcaaagg--aca----tgaacagaaacttctcaaaacaagacattcctgcagccaacaaacacatgaaaagaggctcaacgtcactgatcattagagaaatgcaaatcaaaacacagtaagataccatctcacaccaatcagaacagcaattattaaaaagtcaagaaaccacacacactggcaaggttgtagagaaatagTAcagacataatccgcactgtagaccaaatgcatccaatagatatttacaaaacgttttatctaagagctacagaatacacatttttttcctcagcacataaatcaatctccagaatagaccatatgttaggtcacaaaacaaatcttaaaccatttgaaataatatcaggcatcttctctaaccacaatgaaataaaattagaaaATaataggaaggcttttacactgttggtgggaatgtaaattagttcaaccatcgtgaaagacagtgtggtgattcctcaaagatctagagccagaaatacaatttgacccaccaatcccattactggatatataaccccaaattataaatcattctattacaaagatacatgcacacgtatgttgattgaagcactattcacaatagcagggacatggaatcaacccaaatgcccatcaatgctagactggatttttaaaatgtggtacatatacaccatggaatactatgcagccataaaaaggaatgagatcatgttctttgcaaggacatgaatga i chlSab2.chr2 I 149 C 0 e nomLeu3.chr25 4502122 12816 + 32716333 I a score=6932556.000000 s hg38.chr21_KI270874v1_alt 144111 3035 + 166743 agctggaagccattatcctcagcaaagtaacacaggaaaagaaaatcaaatgccacatattcccactcataagtgggagctgaaagatgagaacacatggacacagggaggggaataacacacacttggggggcctgtcatgtggtggggtggggggaaggagagcattagaaaaaattgttaatgcatgctgggcttaatacctaggtgatgggttgacagatgcagcaagccaccatggcacacatttacctatgtaacaaacctgcatattctgcacatgtacccccagaacttaaaataaaaataaaaTTTGTTT--AAAAAAAGATCATTACAGTCACATCTGGGGTATCTTTTCTGGAGAACaaagaataaaattgtgataacaataaattatcaaatagcatctgaggttgaaaactgaaaatataaaaaagaaacaaatgcaaattatgaagttgaaaagtacaataactgaaatgaaaaactgactagcatgaatcaagagtacatttgagatgatagcaaaaggaataagtaaaattaaaagtagatcaatataaatcatttaatctgagtttaaagagtttgggaggagaactaaaagaagaaacagatcttcagCCACACGGTACTTACGGGTATCAATTTCAAGATCCCCCATAGAT-ACAAAAATCCATGGatgcctaatacaatctaaatgctatgtaaatagttgttaaactctattgtttagggaatggtgacc----aaaaaatgtctgtatatgttcaatacagacacaaacgtccttttttcccaaaaattcttgatccagttaattgattcgtggatgtggaactcacagattcagtgggccaactatatgtacaatagaatattattcagcaccc--cccaaaaaaaattttgccatttgcaacaacatggatgag-cctacaggacattatgcgaagtgaaataagccagacacaaaaagaaaaatactgcataatctcatttacatttgaaatccaaagctgaactcatagaaacatagagtaaaaaactgatt------------------------------gcaaggagctggtcaatggcagaaataaagatattttggacagaggttacaaaatttggttataagatgaataagttctggagatctaaagtaaatcattgtaactatagttaatattaatg---tattgtatacttgaaattgcttaaaaaatagatcttacatgttctcacaatgaaaaacaatatttatataaggtgatgaatatgttaattgtggtaatcacattacaatgtatacatatatcaaaatgtcacattattatacaaggctaaatatacacaatctttatttgtcaatAATGACTATATTATATATATTAAAGTaactaggaatataaagactcattatgataaatggtatatacaaaagcccttcagctaatattatacttaatagtaaaacattgaatgctttcttcttaatggcgggaacaaacaaatgatttccactactacttcctctattcaataatatactggcagttacagccgattcaataaggcaaaataag------aaaaaaagaaaaagaaaaaaattaaaccttctataatgaaaataaagaagtaaacctgtctttatttgctgatgacataatcctgtttgtgaaaattcctgaggaatacacaaaaactgccagaactaataagttcagaaggtggcagaatacacac--aatatacaaaactttactctat-tttctatacTAGT---aaaaaaaaaaaaaaaaaaaaTCTGggccaggcattgtggctcacacctgtaatctcagcactttagcaggaggctgagggaggaggatcatttgatgtcagaagtctgagatctgctggagcaacaaagtgacaccccatctctac--aaaaaaattttaaaagttagccaggcatagtggaatgtacctgtagccccagctactcaggaagctgagtttag-aaaaatgcttgcactcaggagttggaggctgcagtgagccataattgtgccactgcactTTTGTGCACTGCCTGCATCCTAACACCcccttactgcaaatgctagcaaagaggccagcacccttgcaattgccaacaccccaccacagccagtgagcgcatgctttgctgtactgccattgatgctggtatgtgtgaatgaggatggattttgctgtcaccactctacaaactgttctttgtctggcaacacccaccagagtgttgtgaccagcagtccaggaatacctt-gcccctccagtgcagcaggttcctaaccctgaggggccagaggacaaagccagggacccaataccagtcctccagagttagaggacatggtccagaagtcttgagcagagtcttggcccccaaaaatcttccagaaatgaagccagtttactgaatccacctcacactacaatcaaacccccaaggacatctaataaaataaaatgagaagaaaaccatccaaaggatagctacatcaaagcttcaaagaacatcagcccacaaagatgaggaagaaccagcacaagaactctggcaactcaaaaatccagagtgtcttcttacctccaaatgataacactagtttcctaacaatggttcttaatcaggctgagatggctgaaatgatagaaatagaattcagaatatggacagaaacaaagatcattgacatacaggagaaagtgaaaacccaatccaaggaatctaaggattacaataaaacaatataggaggtgatagataaaatggtcattaaaagagagaaccacactgatctgacagagctgaaaaacacactacaagaatttcataatgcaatcacaagtattaacagcagaattgaccaaact------------gaggaaagaatatcagggcttgaagactctctctaaaacaactcagtcagagaaaaattttaa--------------------------------------aaaaa---ataaagaatgaacaaaagctctgagaaatatgccattatgaaaagaaacacattctacgattcactggcgtttgtgaaagaaaggaagagaaatt s panTro4.chr21 3758941 3032 + 32799110 agctggaagccattatcctcagcaaagtaacacaggaaaagaaaatcaaatgccacatgttcccactcataagtgggagctgaacgatgagaacacatggacacagggaggggaataacacacacttggggggcctgtcatgtggtggggtggtgggaaggagagcattagaaaaaattgctaatgcatgctgggcttaatacctaggtgatgggttgatagatgcagcaagccaccatggcacacatttacctatgtaacaaacctgcatattcggcacgtgtacccccagaacttaaaataaaaataaaatttgttt--aaaaaaagataattaCAGTCACATCTGGGGTATCTTTTCTGGAGAACaaagaataaaattgtgataacaatagattatcaaatagcatctgaggttgaaaactgaaaatataaaaaagaaacaaatgcaaattatgaagttgaaaagtacaataactgaaatgaaaaactgactagcatgaatcaagagtacatttgagatgatagcaaaaggaataagtaaaattaaaagtagatcaatataaatcatttaatctgagtttaaagagtttgggaggagaactaaaagaagaaacagatcttcagCCACAcggtacttatgggtatcaatttcaagatcccccatagat-acaaaaatccatggatgcttaatacaatctaaatgctatgtaaatagttgttaaactctattgtttagggaatggtgacc----aaaaaatgtctgtatatgttcaatacagacacaaacatccttttttccctaaaattcttgatccagttatttgattcgtggatgtggaactcacagattcagtgggccaactatatgtacaatagaatattattcagcaccc--cccaaaaaaatttttgccatttgcaacaacatggatgaa-cctacaggacattatgctaagtgaaataagccagacacaaaaagaaaaatactgcataatctcatttacatttgaaatccaaagctgaactcgtagaaacatagagtaaaaaaccgatt------------------------------gcaaggagctggtcaatggcagaaataaagatattttggacagaggttacaaaatttggttataagatgaataagttctggagatctaaagtaaatcattgtaactatagttaatatcaatg---tattgtatatttgaaattgcttaaaagatagatcttacatgttctcacaatgaaaaataatatttatataaggtgatgaatatgttaattgtggtaatcacattacaatgtatacatatatcaaaatgtcacattattatacaaggctaaatatacacaatctttatttgtcaatAATGACTATATTATATATATTAAAGTaactaggaatataaagactcattatgataaatggtatatacaaaagcccttcagctaatattatacttaatagtaaaacattgaatgctttcttcttaatggcgggaacaaaccaatgatttccactactacttcctctattcaataatgtactggcagttacagccgattcaataaggcaaaataag------aaaaaaagaaaaagaaaaaaattaaaccttctatcatgaaaataaagaagtaaacctgtctttatttgctgatgacataatcctgtttgtgaaaattcctgaggaatacacaaaaactgccagaactaataagttcagaaggtggcagaatacacac--aatatacaaaacttta-tc----tttctataATAGTaaaaaaaaaaaaaaaaaaaaaaaTCTGggccaggcattgtggctcacacctgtaatctcagcactttagcaggaggctgagggaggaggatcatttgatgtcagaagtctgagatctgctggagcaacaaagtgacaccccatctctac--aaaaaatttttaaaagttagccaggcatagtggaatgtacctgtagccccagctactcaggaagctgagtttag-aaaaatgcttgcactcaggagtttgaggctgcagtgagccataattgtgccactgcactTTTGTGCACTGCCTGCATCCTAACACCcccttactgcaaatgctagcaaagaggccaccacccttgcaattgccaacaccccaccacagccagtgagcgcatgctttgctgtactgccattgatgctggtatgtgtgaatgaggatggattttgctgtcaccactctacaaattgttctttgtctggcaacacccaccagagtgttgtgaccagcagtccaggaatacctt-gcccctccagtgcagcaggatcctaaccctgaggggccagaggacaaagccagggacccaataccagtcctccagagttagaggacatggcccagaagtcttgagcagagtcttggcccccaaaaatcttccagaaatgaagccagtttactgaacccacctcacactacaatcaaagccccaaggacatctaataaaataaaatgagaagaaaaccatccaaagcatagctacatcaaagcttcaaagaacatcagcccacaaagatgaggaagaaccagcacaagaactctggcaactcaaaaatccggagtgtcttcttacctccaaatgataacactagtttcctagcaatggttcttaatcaggctgagatggctgaaatgatagaaacagaattcagaatatggacagaaacaaagatcattgacacacaggagaaagtgaaaacccaatccaaggaatctaaggattacaataaaacaatataggaggtgatagataaaatggtcattaaaagagagaaccacactgatctgatagagctgaaaaacacactacaagaatttcataatgcaatcacaagtattaacagcagaattgaccaaact------------gaggaaag--tatcagggcttaaagactctctctaaaacaactcagtcagagaaaatttttta--------------------------------------aaaaa---ataaagaatgaacaaaagctctgagaaatatgccattatgaaaagaaacacattctacgattcactggcatttgtgaaagaaaggaagagaaatt i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 17028066 2985 + 48394510 agctggaagccattatcctcagcaaagtaacgcaggaaaagaaaatcaaatgccaaatgttcttactcataagtgggagctgaacgatgagaacacatggacacaggaagggga--aaaacacacttggaggacctgttaggtggtggggtgggggaagggagagcattagaaaaaatttctaatgcatgctgcgcttaatacttaggtgatgggttgatagatgcagcaagccaccatggcacacatttacctatgtaacaaacctgcatattctgctcgtgtacccccagaacttaaaataaaaaaaaaatttgttt--aaaaaaagataattaaaTTCACATCTGGGGTA-----TCTGGAGAACAAAGAATAAAATTGTGATAACAATAAATTTTCAAATAGCATCTGAGGTTGAAAACTgaaaatataaaaaagaaacaaatgcaaattatgaagttgaaaagtacaataactgaaataaaaaactgactagcatgaatcaagagtacatttgagatgatagcaaaaggaataagtaaaattaaaagtagatcaatataaatcatttaatctgagtttaaagagtttgggaggagaactaaaagaagaaacagatcttcagCCACACTGTACTTATGGGTATCAATTTCAAGATCCCCCATAGATAAAAAAAATCCACGGatgcctaatacaatgtaaatgctacataaatagttgttaaactgtattgtttagggaatggtgacc---aaaaaaatgtctgtatatgttcaatacagacacaaacgtccttttttccctaaaattcttgatccagttatttgattcatggatgtagaactcacagattcaatgggccaactgtatgtacaatagaatattattcagcacccctcccaaaaaaaattttgccatttgcaacaacatggatgaa-cctacaggacattatgctaagtgaaataggccagacacaaaaagaaaaatactgcataatctcatttacatttgaaatccaaagctgaactcatagaaacatagagtaaaaaagtggtg------------------------------gcaaggagcttgtcaatggcagaaataaagagattttggacagaggttacaaaacttggttataagatgagtaagttctgaagatctaaagtaaatcattgtaactatagttaatattaatg---tattgtatacttgaaattgcttaaaaaatagatcttacctgttctcacaatgaaaaataatatttatataaggtgatgaatatgttaactgtagtaatcacattacaatgtatacatatatcaaaatgtcacattatcatacaaggctaaatatatacaatctttatttgtcaatAATGACTATATTATATATATTAAAGTaactaggaatataaagacgcattatgataaatggtatatacaaaagcccttcagctaatattatacttaatagtaaaacattgagtgctttcttcttaatggtgggaacaaaccaatgatttccactacaacttcctctattcaataatgtactggcagttacagccaattcaataaggcaaaataag------aagaaaagaaaaagaaaaaaattaaaccttctataatgaaaataaagaagtaaacctgtctttatttgctgatgacataatcctg-------------------------------------------ATAAGTTCAGAAGGTGGCAGAATACACACTTAATGTACAAAACTTTACTCTATCTTTCTATACCAGT-------AAAAAAAAAAAAAAAATCTGggccaggcattgtggctcacacctgtaatctcagcactttagcaggaggctgagggaggaggatcatttgatgtcagaagtctgagatctgctggagcaacaaagtgacaccccatctctac--aaaaaaattttaaaagttagccaggcatagtggaatgtacctgtagccccagctactcaggaagctgagtttagaaaaaatgcttgcactcaggagtttgaggctgcagtgagccataattatgccactgcactTTTGTACACTGTCTGCATCCTAACACCcccttactgcaaatgctagcaaagaggccagcacccttgcaattgccagcaacccaccacagccagtgagtgcacgctctgctgtactgccattgatgctggtatgtgtgaatgaggatggattttgctgtcaacaccctacaaattgttctttgtctggcaacacccaccagagtgttgtgaccagcagtccaggaacacctt-gcccctccagtgcagcaggttcctaaccctgaggggccagatgacaaagccagggacccagtaccagtcctccagagttagaggacatggtccagaagtcttgagcagagtcttggcccccaaaaatcttccagaaatgaagccagtttactgaacccacctcacactacaatcaaaaccccaaggacatctaataaaataaagtgagaagaaaaccatccaaaggatagctatgtcaaagcttcaaagaacatcagcccacaaagatgaggaagaaccaacagaagaactctggctactcaaaaatccagagtgtcttcttacctccaaatgataacactagtttcctagcaatggttctttatcaggctgagatggctgagatgatagaaatagaattcagaatatgaacagaaacaaagatcattgacatacagcagaaagtgaaaacccaatccaaggaatctaaggattacaataaaacaatat---aggtgatagataaaatggtcattaaaagaaagaaccacactgatccaatagagctgaaaaacacactacaagaatttcataatgcaatcacaagtattaacagcagaattgaccaaact------------gaggaaaggatatcagggctcgaagactctctctaaaacaactcagtca-agaaaaattttta--------------------------------------aaaaa---ataaagaattaacaaaacctctgagaaatatgtcattatgaatagaaatacattctatgattcactggcatttgtgaaagaaaggaagagaaatt i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4514938 3007 + 32716333 agctggaagccattatcctcagcaaagtaacacaggaaaagaaaatcaaatgccacatgttctcactcataagtgggagctgaaggatgagaacacatggacacagggaggggaatgacacacacttggggggcctgtcaggtggtggggtggggggagggagagcattagaaaaaattgctaatgcatgctg-gcttaatacctaggtgatgggttgatagatgcagcaatccaccatggcacacatttacctatgtaacaaacctgcatattctgcacatgtacccccagaacttaaaataaaaataaaatttgttt-aaaaaaaagataattaCAGTCACATCTGGGACATCTTTTCTGGAGAACaaagaataaaattgtgataacaa---attatcaaatagcatctgaggttgaaaactgaaaatataaaaaataagcaaatacaaattacgaa---gaaaagtacaataactgaaatgaaacattgactagcatgaatcaagagtacatttgagatgatagcaaaaggaaaaagtaaaattaaaagtagatcaatataaatcatttaatctgaatttaaagagtttt---ggagaactaaaaaaagaaacagatcttcagCCACTCGGTACTTACAGGTATCAATTTCAAGATCCCCCATAAAT-ACAAAAATCCATGGatgcctaatacaatgtaaatgctacataaatagttgttaaactgtgttgtttagggaacggtgacc----aaaaaatgtctgtatacgttcaatacagatacaaacatccttttttccctaaaattcttgatctagttatttgattcgtggatgtggaactcacagattcaataggccaactgtatgtacaaaagaatattattcagcaccc--ccccaaacaagctttgccatttgcaacaacatggatgaa-gctacaggacattatgctaagtgaaataagacagacacaaaaagaaaaatacagcataatctcatttacatttgaaatccaaagctgaactcatagaaacatagagtaaaaaagtggtt------------------------------gcaaggagctggtcaatggcagaaataaagatattttagatagagggtacaaaatttggttataagatgaataagttctggagatctaaagtaaatcattgtaactatagttaatattaatg---tattgtatacttgaaattgcttaaaaaatagatcttacatgttctcacaatg-aaaataatatttatataaggtgatgaatatgttaattgtggtaatcacattacaatgtatacatatatcaaaatgtcacatt---atacaagaataaatatatgcaatctttatttgtcaatAATGACTATATTATATATATTAAAGTaact-ggaatataaagactcattatgataaatggtatatacaaaagcccttcagctaatattatacttaatagtaaaacattgactgctttcttcttaatggtgggaacaaaccaatgatttccactactacttcctctattcaataatgtactggcagttccagctgattcaataaggcaaaataag------aaaaaaagaaaaagagaaaaattaaaccttctgtaatgaaaataaagaagtaaacctgtctttatttgctgatgac-taatcctgtttgtgaaaattccttaggaatacacaaaaactgccagaactaataagttcagaaggtggcagaatacacacttaatatacaaaacttta-tt----tttctatacTAGT----------AAAAAAAAAAAAATCTGggccaggcattgtggctcacacctgtaatctcagcactttagcaggaggctgagggaggagggtcatttaatgtcagaagtctgagatctgctagagcaacaaagtgacaccccatctctac--aaaaaaattttaaaagttagccaggcatagtggaatgaacctgtagccccagctactcaggaagctgagtttag-aaaaatgcttgcactcaggagtttgaggctgcagtgagccataattgtgccactgcactTTTGTGCACTGCCTGCATCCTAACACCcccttactgcaaatgttagcaaagaggccagcacccttgcaattgccagcaccccaccacagccaatgagcgcacgctctgctgtactgccattgatgctggtatgtgtgaatgaggatggattttgctgtcaccactctataaatggttctt----tggcaacacccaccagagtgttgtgactagcagtccaggaatacctt-gcccctccagtgcagcaggttcctaaccctgaggtgccagaggacaaagccagggacccaataacaatcctccagagttagaggacatggtccaggagtcttgagcagagtcttggcacccaaaaatcttccagaaatgaagccagtttactgaacccacctcacactactgtcaaacccccaaggacatctaataaaataaaatgagaagaaaaccatctaaaggatagctatgtcaaagctccaaagaacatcagcccacaaagatgaggaagaaccagcacaagaactctggcaactcaaaaatccagagtgtcttcttacctccaaatgataacactagtttcctagcaatggttcttaatcagactgagatggctgaaatgatagaaatagaattcaggatatggacagaaacaaagatcattgacatacaggagaaagtgaaaacccaatccaaggaatctaaggattacaataaaacaatataggaggtgatagataaaatagtcattaaaagaaagaaccacactgatctgatagagctgaaaaacacactacaagaatttcataatgcagtcacaagtattaacagcagaattgaccaaact------------gaggaaagaatatcagggcttgaagactctctctaaaacaactcagtcagagaaaaatttaaa--------------------------------------aaaaa---ataaagaatgaacaaaacctctgagaaatatgccattatgaaaagaaacactttctacgattcactgacatttgtgaaagaaacgaagagaaatt i nomLeu3.chr25 I 12816 C 0 s rheMac3.chr3 168627676 3111 - 198365852 agctggaaggcattatcctcagcaaagtaatgcaggaaaagaaaatcaaacaccacatgttctc-----taagtgggagccgaatgatgagaacacatggacacaaggaggggaacaacacacacttgaggggcctgatgagtggctggggtgggggaaggaaagcattagaaaaaattgctaatgcatggtgggcttcatacctaggtgatgggttgatagatgtagcaagccaccatggcacacatttacctatgtaacaaacctgcatattctgcacatgtacacccagaacttaaaataaaaataaaaTTTGTTTCAAAGAAAAGATAATTACAGTCACATCTGGGGTATCTTTTCTGGAGAGCaaagaataaaattgtgataacaa---attatcaaatagcatctgaggttgaaaactaaaaatatagga---aaagaaatgcaaattatgaggttgaaaagtacaataactgaaatgaaaaattgactggcatgaatcaagagtacatttgagatgatagcacaaggaataagtaaacttaaaagtagatcaatataaatcatttaatctgagtttaaagagtttgggaggagaactaaaaaaagaaacagatcttcagCCACATGGTGCTTATGGGTATCAGTTTCAACATCCCCCATGGAT-ACAAAAATCCATGGatgcctaatacaatgtaaatgctatgtaaatagttgttaaactgtattgtttagggaatggtgacaaagaaaaaaaagtctgtatatgttcaatacagacacaaacatcctttattccctaaaattcttgatccagttgtttgaatcgtggatgtggaactcacagattcaatgggccaactgtatgtacaatagaatattattcagctccc--ctcc-caaaaaatttgccatttgcaacaacatggatgaaccctagaggacattatgctaagtgaaataagccagacacaaaaagaaaaatactgcataatctcctttacatttgaaatccaaagttgaactcatagaaatgtagagtaaaaaagtggttgcaaggannnnnnnnnnnnnnnnnnnnnnngcaaggagctggtcaatggcagaaataaagatattttggacagagggtacaaaatttggttataagatgaacaagttgtggagatctaaagtaaaacattgtaactatagttaatactaatgtattattgtacacttgagattgcttaaaaaatagatcttaaatgttctcacaacaaaaaataatatttatataaggtgatgaatatgttaattgtggtaatcacattacaatgtatacatgtatcaaaatgtcacatt---atacaagac----tatatacaatctttatttgtcaatAATGACTATATTATATATATTAAAGTaactaggaatataaaaactcattatgataaatggcatatacaaaagcccttcagctaatattatacttaatggtaaaagattgaatgctttcttcttaatggagggaacaaaccaatgatttccactactacttcctctattcaataatgtactggcagttccagacgattcaataaggcaaaataagagaaaaagaaaaagaaaaagaaaaacattaaaccttctataatgaaaagaaagaagtaaacctgtctttatttgctgatgacacaatcctgtttgtgaaaattccttaggaatacacaaaaactgccagaactaataagttcaaaaggtggcagaatacacacttagtatacaaaattttactctatctttctatacTAAT---------TAAAAAAAAAAAAATTGAggccaggcactgtgacttatgcctgtaatctcaacacttgagcaggaggctgagggaggaggatcatttgacgtcagaagtctgagatctgctggagcaacaaagtgacaccccatctctacaaaaaaaaatttt--aagttagccag-cttagtggaatgtacctgtagccccagctacacaagaagctgagtttag-aaaagtgctttcactcaggagtttgaggctgcagtgagccataattgtgccactgtactTTTGTTCACTGCCTGCATCCTAActcccgcttactgcaaatgctagcaaagaggccagcactcctgcaactgccagtactccaccacagccaaagagcgcatactctgctgtactgctattgatgctggtatgtgtgaatgaggatggactttgctgtcaccactctacaaattgttctttggctggcaacacccaccagagtgttgtgaccagcagtccaggaataccttggcccccccagtgcagcaggttcctaaccctgaggggccagaggacaaagccagggacccaataccagtcctccagagttagagggcatagtccagaagtcttgagcagagtctcggccctcaaaagtcttccagaaatgaagccagtttactgaacccacctcacactacaatcaaaccaccaaagacatctaat-aaataaaatgagaagaaaaccatccaaaggatagctacgtcaaagcttcaaagaacatcagcccacagagatgagaaagaaccagcacaagaactctggcaactcaaaaatccagagtgtcttcttacctccaaatgatcacgcgaatttcctagcaatggttcttaatcaggctgagatggctgaaatgatagaaatagaattcagaatatggacagaaacaaagatcactgacatacaggagaaagtgaaaacccaatccaagcaatctaaggattacaataaaacaatataggagctggtagataaaatggccattaaaagaaagaacaaaactggtctgatagagctgaaagacatactacaagaatttcataatgcaatcacatgtattaacagcagaattggccaagctgaggaaagaatcgaggaaagaatctcagggcttgaagactctctctaaaacaactcagccagagaaaaactaaaaaaaaaataaagaatgaacaaaacctctgagaaatatttaaaaaaaaataaagaatgagcaaaacctctgagaaatatgacattatgagaagaaccccattatatgattcactggcatatgtgaaagaaaggaagagaaact i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162292262 3030 - 192294377 agctggaaggcattatcctcagcaaagtaatgcaggaaaagaaaatcaaacaccacatgttctc-----taagtgggagccgaatgatgagaacacatggacacaaggaggggaacaacacacacttgaggggcctgatgagtggctggggtgggggaaggaaagcattagaaaaaattgctaatgcatggtgggcttcatacctaggtgatgggttgatagatgtagcaagccaccatggcacacatttacctatgtaacaaacctgcatattctgcacatgtacacccagaacttaaaataaaaataaaaTTTGTTTCAAAGAAAAGATAATTACAGTCACATCTGGGGTATCTTTTCTGGAGAGCaaagaataaaattgtgataacaa---attatcaaatagcatctgaggttgaaaactaaaaatatagga---aaagaaatgcaaattatgaggttgaaaagtacaataactgaaatgaaaaattgactggcatgaatcaagagtacatttgagatgatagcacaaggaataagtaaacttaaaagtagatcaatataaatcatttaatctgagtttaaagagtttgggaggagaactaaaaaaagaaacagatcttcagCCACATGGTGCTTATgggtatcagtttcaacatctcccatggat-acaaaaatccatggatgcctaatacaatgtaaatgctatgtaaatagttgttaaactgtattgtttagggaatggtgacaaagaaaaaaaagtctatatatgttcaatacagacacaaacatcctttattccctaaaattcttgatccagttgtttgaatcgtggatgtggaactcacagattcaatgggccaactgtatgtacaatagaatattattcagccccc--ctcc-caaaaaatttgccatttgcaacaacatggatgaaccctagaggacattatgctaagtgaaataagccagacacaaaaagaaaaatactgcataatctcctttacatttgaaatccaaagttgaactcatagacatgtagagtaaaaaagtggtt------------------------------gcaaggagctggtcaatggcagaaataaagatattttggacagagggtacaaaatttggttataagatgaacaagttgtggagatctaaagtaaaacattgtaactatagttaatactaatgtattattgtacacttgagattgcttaaaaaatagatcttaaatgttctcacaacaaaaaataatatttatataaggtgatgaatatgttaattgtggtaatcacattacaatgtatacatgtatcaaaatgtcacatt---atacaagac----tatatacaatctttatttgtcaatAATGACTATATTATATATATTAAAGTaactaggaatataaaaactcattatgataaatggcatatacaaaagcccttcagctaatattatacttaatggtaaaagattgaatgctttcttcttaatggagggaacaaaccaatgatttccaccactacttcctctattcaataatgtactggcagttccagacgattcaataaggcaaaataagagaaaaagaaaaagaaaaagaaaaacattaaaccttctataatgaaaagaaagaagtaaacctgtctttatttgctgatgacacaatcctgtttgtgaaaattccttaggaatacacaaaaactgccagaactaataagttcaaaaggtggcagaatacacacttattatacaaaattttactctatctttctatacTAAT---------TAAAAAAAAAAAAATTGAggccaggcactgtggctcatgcctgtaatctcaacactttagcaggaggctgagggaggaggatcatttgacgtcagaagtctgagatctgctggagcaacaaagtgacaccccatctctac-aaaaaaaatttt--aagttagccag-cttagtggaatgtacctgtagccccagctacacaagaagctgagtttag-aaaagtgctttcactcaggagtttgaggctgcagtgagccataattgtgccactgtactTTTGTTCACTGCCTGCATCCTAACTCCCGCTTACTGCAAATGCTAGCAAAGAGGCCAGCACTCCTGCAACTGCCAGTACTCCACCACAGCCAAAgagcgcatactctgctgtactgctattgatgctggtatgtgtgaatgaggatggactttgctgtcaccactctacaaattgttctttggctggcaacacccaccagagtgttgtgaccagcagtccaggaataccttggcccccccaatgcagcaggttcctaaccctgagaggccagaggacaaagccagggacccaataccagtcctccagagttagagggcatagtccagaagtcttgagcagagtctcggccctcaaaagtcttccagaaatgaagccagtttactgaacccacctcacactacaatcaaaccaccaaggacatctaat-aaataaaatgagaagaaaaccatccaaaggatagctacgtcaaagcttcaaagaacatcagcccacggagatgagaaagaaccagcacaagaactctggcaactcaaaaatccagagtgtcttcttacctccaaatgatcacgctaatttcctagcaatggttcttaatcaggctgagatggctgaaatgatagaaatagaattcagaatatggacagaaacaaagatcactgacatacaggagaaagtgaaaacccaatccaagcaatctaaggattacaataaaacaatataggagctggtagataaaatggccattaaaagaaagaacaaaactggtctgatagagctgaaagacatactacaagaatttcataatgcaatcacaagtattaacagcagaattggccaagct------------gaggaaagaatctcagggcttgaagactctctctaaaacaactcagtcagagaaaaattttaa--------------------------------------aaaaatacataaagaatgaacaaaacctctgagaaatatgacattatgagaagaaccccattatatgattcactggcatatgtgaaagaaaggaagagaaact i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150987072 3022 - 180432695 agctggaaggcattatcctcagcaaagtaatgcaggaaaagaaaatcaaacaccacatgttctc-----taAGTGGGAGccgaatgatgagaacacatggacacaaggaggggaacaacacacacttgAGGGGCCTGACGAGTGGCTGGGGTAGGGGAAGGAAAGCATTAGAAAAAATTGCTAATGCATGGTGGGcttcatacctaggtgatgggttgatagatgtagcaagccaccatggcacacatttacctatgtaacaaacctgcatattctgcacatgtacaccaagaacttaaaataaaaataaaatttgtttcaaagaaaagataattacAGTCACATCTTGGGTATCTTTTCTGGAGAGCAAAGAATAAAATTGTGATAACAA---ATTATGAAATAGCATCTGAGgttgaaaactgaaaatataaga---aaagaaatgcaaattatgaggttgaaaagtacaataactgaaatgaaaaactgaCTGGCATGAATCAAGAGTACATTTGAGATGATAGCACAAGGAATAAGTAAACTTAAAAGTAGATCAATATAAATCATTTAATCTGAGTTTAAAGAGTTTGGGAGgagaactaaaaaaagaaacagatcttCAGCCACATGGTGCTTATGAGTATCAGTTTCAACATCCCCCATGGAT-ACAAAAATCCATGGatgcctaatacaatgtaaatgctacataaatagttgttaaactgtattgtttagggaatggTGACC---aaaaaaaCGTCTGTATATGTTCAATACAGACACAAACATCCTTTTTTCCCTAAAATTCTTGATCCAGTTGTTTGAATCGTGGATGCAGAACTCACAGATTCAATGGTCCAACTGTATGTACAATAGACTATTATTCagctccc--ccccaaaaaaaatttgccatttacaacaacatggatgaa-cctagaggac---atgctaagtgaaataagccagacacaaaaag-aaaatactgcataatctcctTTACATTTGAAATccaaagttgaactcatagaaatgTAGAGTAAAAAAGTGGTT------------------------------GCAAGGAGCTGGTCaatggcagaaataaagatattttggaCAGAGGGTACAAAATTTGGTTATAAGATGAACAAGTTGTGGAGATCTAAAGTAAAACATTGTAACTATAgtttatattaatgtattattgtacacttgaaattgcttaaaaaatagatcttaaatgttctcacaacaaaaaatagtatttatataaGGTGATGAATAGGTTAATTGTGGTAATCACattacaatgtatacatgtatcaaaatgtcacatt---acATAAGACTAAATATATACAATCTTTATTTGTC---AatgactatattatatatattaaagtaACTAGGAATATAAAAACTCATTATGATAAATGGCATATACAAAAGCCCTTcagctaatattatacttaatggtaaaagattGAATGCTTTCTTCTTAATGGAGGGAACAAACCAATGATTTCCACTACTACTTCCTCTATTCAATAATGTACTGGCAGTTCCAGATGATTCAATAAggcaaaataagagaaaaagaaaaagaaaaagaaaaaaattaaaccttctataatgaaaagaaagaagtaaacctGTCTTTATTTGCTGATGACACAATCCTGTTTGCGAAAATTCCTTAGGAATACACAAAAACTGCCAGAACTAATAAGTTCAAATGTTGACAGAATACACACTTAGTATACAAAACTTTACTCTATCTTTCtatactaa----------taaaaaaaaaaaaatcaaggccaggcattgtggctcacacctgtaatctcaacactttagcaggaggctgagggaggaggatcatttGACGTCAGAAGTCTGAGATCTGCTGGAGCAACaaagtgacaccccatctctac--aaaaaaatttt--aagttagcCAG-CTTAGTGGAatgtacctgtagccccagctacacaggaagctgagttTAG-AAAAGTGCTTtcactcaggagtttgaggctgcagttagccataattgtgccactgtacttttGTTCACTGCCTGCATCCTAACACCCACTTACTGCAAATGCTAGCAAAGAGGCCAGCACTCCTGCAACTGCCAGTACTCCACCACAGCCAAAGAGCGCATACTCTGCTGTACTGCTATTGATGCTGGTGTGTGTGAATGAGGATGGACTTTGCTGTCACCACTCTACAAATTGTTCTTTGGCTGGCAACACCCACCAGAGTGTTGTAACCAGCAGTCCAGGAATACCTTGGcccccccAGTGCAGCAGGTTCCTAACCCTgaggggccagagaacaaagccaggGACCCAATACCAGTCCTCCAGAGTTAGAGGGCATGGTCCAGAAGTCTTGAGCAGAGTCTTGGCCCTCAAAAGTCTTCCAGAAATGGAGCCAGTTTACTGAACCCACCTCACACTACAATCAAACCACCAAGGAcatctaat-aaataaaatgagaagaaaaccaTCCAAAGGATAGCTACgtcaaagcttcaaagaacatCAGCCCAcggagatgagaaagaaccagcacaagaactctggcaactcaaaaatccagagtgtcttcttacctccaaatgatcACGCTAATTTCCTAGCAATGGTTCTTAatcaggctgagatggctgaaatgatagaaatagaattcagaatatggacagAAACAAAGATCACTGACATACAGGAGAAAGTGAAAACCCAATCCAAGCAATCTAAGGATTACAATAAAACAATATAGGAGCTGGTAGATAAAATGGCcattaaaagaaagaacaaaactggtctgatagagctgaaagacatactacaagaatttcataatgcaatcacaagtattaacagcagaattggccaagct------------gaggaaagaatctcagggCTTGAAGACTCTCTCTAAAACAACTCAGTcggagaaaaatgtaaa--------------------------------------aaaaaaaaataaagaatgaacaaaacctctgagaaatatgacaTTATGAGAAGAACCCCATTATATGATTCACTGGCATatgtgaaagaaaggaagagaaact i papAnu2.chr3 C 0 I 483 s chlSab2.chr2 15076579 3018 - 90373283 agctggaaggcattatcctcagcaaagtaatgcaggaaaagaaaatcaaacaccacatgttctc-----taagtgggagccgaatgatgagaacacatggacgcagagaggggaacaacgcatacttgaggggcctgacaagtggctggggtgggggaaggaaagcattagaaaaaattgctaatgcatggtgggcttcgtacctaggtgatgggttgatagatgtagcaagccaccatggcacacattcacctatgtagcaaacctgcatattctgcacatgtacacccagaacttaaaataaaaataaaaCTTGTTTCAAAGAAAAGATAATTACAGTCACATCTGGGGTATCTTTTCTGGAGAGCaaagaataaaattgtgataacaa---attaccaaatagcatctgaggttgaaaactgaaaatataaga---aaagaaatgcaaattatgaggttgaaaagtacaataactgaaatgaaaaattgactggcatgaatcaagagtacatttgagatgacagcacaaggaataagtaaacttaaaagtagatcaatataaatcatttaatctgagtttaaagagtttgggaggaaaactaaaaaaagaaatagatcttcagCCACGTGGTGTTTATgggtatcagtttcaacatcccccatggat-acaaaaatccatggatgcctaatacaatgtaaacgctacgtaaatagttgttaaactgtattgtttagggaatggtgacc---aaaaaaaagtctgtatatgttcagtacagacacaaacatcctttttcccctaaaattcttgatccagttgtttgaatcgtgggtgcgaaactcacagattcaatgggccaactgtatgtacaatagaatattattcagccccc--cccc-c-aaaaatttgccatttgcaacaacatggatgaa-cctagaggacattatgctaagtgaaataagccagacacaaaaagaaaaatactgcatcatctcctttacatttgaaatccaaagttgaactcatagaaatgtagagtaaaaaagtggtt------------------------------gcaaggagatggtcaatggcagaaataaagatattttggacagagggtacaaaatttggttataagatgaataagttctggagatctaaagtaaaacattgtaaccataattaatattaatg---tattgtacacttgaaattgcttaaaaaatagatcttaaatgttctcacaacaaaaaatatta-taatataaggtgatggtt--gttaattgtggtaatcacattacaatgtatacatgtatcaaaatatcacatt---atacaagactaaatatatacaatctttatttgtcaatAATGACTGTATTCTATATATTAAAGTaactaggaatataaaaacttatcatgataaatggcatatacaaaagcccttcagctactattatacttaatagtaaaagattgaatgctttcttcttaatggagggaacaaaccaatgatttccactactacttcctctattcaataatgtactggcagttccagacgactcaataagacaaaataagagaaaaagaaaaagaaaaagaaaaaaatcaagccttctataacgaaaagaaggaagtaaacctgtctttatttgctgatgacacaatcctgtttgtgaaaattccttaggaatacacaaaaactgccagaactaataagttcaaaaggtggcagaatacacacttagtatacagaactttactctatctttctatactaat-----------aaAAAAAAAAAATCGAggccaggcattgtggctcacacctgtaatctcagcactttagcaggaggctgaaagaggaggatcatttgatgacagaagtctgagatctgctggaataacaaagtgacaccccatctctacaaacaaaattttt--aagttagccagccttagtggaatgtacctgtagccccagctactcaggaagctgagtttag-aaaaatgctcgtgctcaggagtttgaggctgcagtgagccataattgtgccactgtactTTTGTTCACTGCCTGCATCCTAATACCCACTtgctgcaaatgctagcaaagaggccagcactcctgcaacggccagtactccaccacagccaaagagcgcatactctgctgtactgctatcgatgctggtatgtgtgaatgaggatggactttgctgtcaccactctacaaattgttctttggctggcaacacccaccagagtgctgtgaccagcagtccaggaatacctcggcccccccagtgcagcagtttcctaa-cctgaggggccagaggacaaagccagggacccaataccagtcctccagagttagagggcatggtccagaagtcttgagcagagtcttggtcctcaaaagtcttccagaaatgaagccagtttactgaacccacctcgcactacaatcaaaccgccaaggacatctaat-aaataaaatgagaagaaaaccatccaaaggatagctacgtcaaagcttcaaagaacatcagcccacggagatgagaaagaaccagcacaagaactctggcaactcaaaaatccagagtgtcttcttacctccaaatgatcacactaatttcctagcaatggttcttaatcaggctgagatgactgaaatgatagaaatagaattcagaatatggacagaaacaaagatcactgacatacaggagaaagtgaaaacgcaatccaagcaatctaaggattacaataaaacaatacaggagctggtagataaaatggccattaaaagaaagaacaaaactggtctgatagagctgaaagacatactacaagaatttcataatacaatcacaagtattaacagcagaattggccaagct------------gaggaaagaatctcagggcttgaagactctctctaaaacaactcagtcggagaaaaatttaaa--------------------------------------aaaa----ataaagaatgaacaaaacctctgagaaatatgacattatgaaaagaaccccattatatgattcactagcatatgtgaaagaaaggaagagaaact i chlSab2.chr2 C 0 C 0 a score=1153930.000000 s hg38.chr21_KI270874v1_alt 147146 649 + 166743 aaccagcttggaaaacatttttcaggatattgtccataaaaatttccccaaccacactagagaagccaatattcaaattcagaaaatttagagaatccctgtgaaatactaaacaagaagaccatccccaagacatatagtcatcagattctccaaggtcaaaatgaaagaaaacctgacaagaaagctagagagaaagtgcaggctgcctactgatatggtttggctgtgttcccacccaaatctcatcttgaattgt-actccta-taatccctatatgttgtgggagggacctggtgggagataattgaatcacgaaggcaggttttcccatgctgtcctcaagacagtgaataagtctcacgagatctgatggttttataaatggcagttccctggcacatgctgtcttgcctgctgccatgtaagatgtgtcttttctcctccttcaccttctgccataattgtgaggtctccccagccatgtggaactgtgagtccattaaaccatttttttaataaattatccagtcttgggcatttcttcataacagtatgaaaatggactaatacatctacaaatagaaccctaccaggctaacagcagacccgttagcagaaaccctacaagccagaagagatgggggttc s panTro4.chr21 3761973 649 + 32799110 aaccaacttggaaaacatttttcaggatattgtccataaaaatttccccaaccacactagagaagccaacattcaaattcagaaaatttagagaatccctgtgaaatactaaacaagaagaccatccccaagacatatagtcatcagattctccaaggtcaaaatgaaagaaaacctgataagaaagctagagagaaagtgcaggttgcctactgatatggtttggctgtgtccccacccaaatctcatcttgaatcgt-actccta-taatccctatatgttgtgagagggacctggtgggagataactgaatcatgaaggcaggttttcccatgctgtcctcatgacagtgaataagtctcacgagatctgatggttttataaatggcagttccctggcacatgctgtcttgcctgctgccatgtaagatgtgccttttctcctccttcactttctgccataattgtgaggcctccccagccatgtggaactgtgagtccattaaaccatttttttaataaattacccagtcttgggtatttcttcataacagtatgaaaatggactaatacatctacaaatagaaccctaccaggctaacagcagacccgttagcagaaaccctacaagccagaagagatgggggttc i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 17031051 650 + 48394510 aaccaacttggaaaacatttttcaggatattgtccataaaaatttccccaaccacactagagaagccaacattcaaattcagaaaatttagagaatccctgtgaaatactaaacaagaagaccatccccaagacatgtagtcatcagattctccaaggtcaaaatgaaagaaaacctgataagaaagctagagagaaagtacaggttgcctactgatatggtttggctctgtccccacccaaatctcatcttgaattgtaactccta-taacacccacatgttgtgggagggacctggtgggagacaattgaatcatgaaggcatgttttcccatgctgttctcatgatagtgaataagtctcacgagatctgatggttttataaatggcagttccctggcatgtgctctcttgcctgctgccatgtaagatgtgccttttctcctccttcaccttctgccattattgtgaggcctctccagccatgtggaactgtgagtccattaaaccatttttttaataaattacccagtcttgggtatttcttcataacagtatgaaaatggactaatacatctacaaatagaaccctaccaggctaacagcagacccgttagcagaaaccctacaagccagaagagatgggggttc i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4517945 651 + 32716333 aaccaacttggaaaacatttttcaggatattgtccataaaaatttccccaaccacactagagaagccaacattcaaattcagaaaatttagagaatccttgtgaaatattaaacaagaagaccatccccaagacatatagtcatcagattctccgaggtcaaaatgaaagaaaacctgataagaaagctagagagaaagtgcaggttgcctactgatatggtttggctgtgtccccacccaaatctcatcttgaattgtaactcctattaacccccacatgttgtcggagggacctggtgggagataattgaatcatgaaggcaggttttcccatgctgttctcatgatagtgaataagtctcacgagatctgatggttttgtaaatggcagttccctggcacatgctctcttgcctgctgccatgtaagatgtgccttttctcctccttcaccttctgccataattgtgaggcctccccagccatgtggaactgtgagtccattaaaccatttttttaataaaatacccagtcttgggtatttcttcataacagtatgaaaatggactaatacatctacaaacagaacccaaccaggctaacagcagacctgttagcagaaaccctacaacccagaagagatgggggttc i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168630787 634 - 198365852 aaccaagttggaaaacatttttcaggatattgtccataaaaatttccccaaccacactagagaagccaacatttaaattcagaaaattgagagaatctctgagaaatactaaacaagaagaccatccccaatacatagagtcatcagattctccaaggtcaaaatgaaagaaaacctgataagaaag-tagagagaaagtgcaggttgcctgctgatgtggtttggctgtgtccccacccaaatctcatcctggattgtaactccta-taatccccacatgttgtgggagg--------------taattgaatcatgaaggcaggttttcccatgctattctcatgatagtgaataagtctcaagagatctgatggttttataaatggcagtttcctggcagatgctctcttgcctgctgccatgtaagatgtgccttttcttctccttcaccttctgccataattgtgaggcctccctagccatgtggaattgtgagtccattaaacca-ttttttaataaattgcccagtcttgggtatttcttcataacagtatgaaaatggactaataaatctaaaaatagaatcctaccaggctaacagcagaccccttagcagaaaccctgcaagccagaagagatgggggttc i rheMac3.chr3 C 0 I 4 s macFas5.chr3 162295292 634 - 192294377 aaccaacttggaaaacatttttcaggatattgtccataaaaatttccccaaccacactagagaagccaacatttaaattcagaaaattgagagaatctctgagaaatactaaacaagaagaccatccccaatacatagagtcatcagattctccaaggtcaaaatgaaagaaaacctgataagaaag-tagagagaaagtgcaggttgcctgctgatgtggtttggctgtgtccccacccaaatctcatcctggattgcaactccta-taatccccacatgttgtgggagg--------------taattgaatcatgaaggcaggttttcccatgctattctcatgatagtgaataagtctcaagagatctgatggttttataaatggcagttccctggcagatgctctcttgcctgctgccatgtaagatgtgccttttcttctccttcaccttctgccataattgtgaggcctccctagccatgtggaattgtgagtccattaaacca-ttttttaataaattgcccagtcttgggtatttcttcataacagtatgaaaacggactaataaatctacaaatagaatcctaccaggctaacagcagaccccttagcagaaaccctgcaagccagaagagatgggggttc i macFas5.chr3 C 0 C 0 s chlSab2.chr2 15079597 635 - 90373283 aaccaacttggaaaacatttttcaggatattgtccataaaaatttccccaaccacactagagaagccaacattcaaattcagaaaattgagagaatctctgcgaaatactaaacaagaagaccatccccaatacatagagtcatcagattctccaaggtcaaaatgaaagaaaacctgataagaaagctagagggaaagtgcagattgcctgctgatgtggtttggctgtgtccccacccaaatctcatcctggattgtaactccta-taatccccacatgttgtgggagg--------------taattgaatcatgaaggcaggttttcccatgctgttctcatgatagtgaataagtctcaagagatctgatggttttataaatggcagttccctgacagatgctctcttgcctgctgccatgtaagatgtgccttttcttctccttcaccttctgccataattgtgaggcctccctagccatgtggaattatgagtccattaaacca-ttttttaataaattgcccagtcttgggtatttcttcataacagtatgaaaatggactactacatctacaaacagaatcctaccaggctaacagcagaccccttagcggaaaccctgcaagccagaagagatgggggttc i chlSab2.chr2 C 0 I 4 e papAnu2.chr3 150990094 483 - 180432695 I a score=1332.000000 s hg38.chr21_KI270874v1_alt 147795 2 + 166743 ta s panTro4.chr21 3762622 2 + 32799110 ta i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 17031701 2 + 48394510 ta i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4518596 2 + 32716333 ta i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162295926 2 - 192294377 ca i macFas5.chr3 C 0 C 0 e rheMac3.chr3 168631421 4 - 198365852 I e chlSab2.chr2 15080232 4 - 90373283 I e papAnu2.chr3 150990094 483 - 180432695 I a score=-556.000000 s hg38.chr21_KI270874v1_alt 147797 2 + 166743 -ta s nomLeu3.chr25 4518598 2 + 32716333 -ta i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162295928 2 - 192294377 tt- i macFas5.chr3 C 0 C 0 e rheMac3.chr3 168631421 4 - 198365852 I e ponAbe2.chr21 17031703 0 + 48394510 C e chlSab2.chr2 15080232 4 - 90373283 I e papAnu2.chr3 150990094 483 - 180432695 I e panTro4.chr21 3762624 0 + 32799110 C a score=997.000000 s hg38.chr21_KI270874v1_alt 147799 12 + 166743 ttcagtattctt s nomLeu3.chr25 4518600 12 + 32716333 ttcagtactctt i nomLeu3.chr25 C 0 I 368 e rheMac3.chr3 168631421 4 - 198365852 I e ponAbe2.chr21 17031703 0 + 48394510 C e chlSab2.chr2 15080232 4 - 90373283 I e macFas5.chr3 162295930 0 - 192294377 C e papAnu2.chr3 150990094 483 - 180432695 I e panTro4.chr21 3762624 0 + 32799110 C a score=0.000000 s hg38.chr21_KI270874v1_alt 147811 1741 + 166743 TTTTTttttttttttaatttatttttttattgataattcttgggtgtttctcacagagggggatttggcagggtcatgggacaatagtggagggaaggtcagcagataaacaagtgaacaaaggtctctggttttcctaggcagaggaccctgcggccctccgcagtgtttgtgtccctgattacttgagattagggattggtgatgactcttcacgagcatgctgccttcaagcatctgtttaacaaagcacatcttgcaccgcccttaatccatttaaccctgagtggacacagcacatgtttcagagagcacagggttgggggtaaggtcacagatcaacaggatcccaaggcagaggaatttttcttagtgcagaacaaaatgaaaagtctcccatgtctacttctttctacacagacacggcaaccatccgatttctcaatcttttccccacctttcccgcctttctattccacaaagccgccattgtcatcctggcccgttctcaatgagctgttgggcacacctcccagacggggtggtggccgggcagaggggctcctcacttcccagtaggggcggccgggcagaggcgcccctcacctcccggacggggcggctggccgggcgggggggctgtccccccccacctccctcccggacggggcggctggccgggcggggggctgacacccccacctccctcccggacggggtggctgccgggcggagatgctcctcacttcccagatggggtggctgccgggcggagaggctcctcacttctcagacggggcagctgccgggcggaggggctcctcacttctcagacggggtggttgccaggcagagggtctcctcacttctcagacggggcggccgggcagagacgctcctcacctcccagacggggtctcggccgggcagaggcactcctcacatcccagatggggcggcggggcagaggcgctccccacatctcagacgatgggcggccgggcagagacgctcctcacttcctagatgtgatggcggctgggaagaggcgctcctcacttcctagatgggatggcggccgggcggagacgctcctcactttccagactgggcagccaggcagaggggctcctcacatcccagacgatgggcggccaggcagagacgctcctcacttcccagacggggtggcggccgggcagaggctgcaatctcggcactttgggaggccaaggcaggcggctgggaggtgtaggttgtagtgagccgagatcacgccactgcactccagcctgggcaccattgagcactgagtgaacgagaccccgtctgcaatcccggcacctcgggaggctgaggttggcgggatcactcgcggttaggggctggagaccggcccggccaacacagcgaaaccccgtctccaccaaaaccagtcaggcgtggcagcgcgtgcctgcaatggcaggcactcggcaggctgaggcaggagaatcaggcagggaggttgcagtgagccgagatggcagcagtacagtccagcttcggctccgcatgagagggagaccgtggggagagggagacagagggagagggagagggagagccggaaaagTTTCTTGTATAGCCCCGGCTCTTAGAGCCAGGCTCTTCACCCTTATTTTCATAAAGCTGCGATGCATGCTTCATACATAATTGTGCATGTTGCTGCCTCCTTCTCCCAGCTGCCCGACGTGTCATC e rheMac3.chr3 168631421 4 - 198365852 I e ponAbe2.chr21 17031703 0 + 48394510 C e chlSab2.chr2 15080232 4 - 90373283 I e macFas5.chr3 162295930 0 - 192294377 C e papAnu2.chr3 150990094 483 - 180432695 I e nomLeu3.chr25 4518612 368 + 32716333 I e panTro4.chr21 3762624 0 + 32799110 C a score=546.000000 s hg38.chr21_KI270874v1_alt 149552 2 + 166743 ta s panTro4.chr21 3762624 2 + 32799110 ta i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 17031703 2 + 48394510 ta i ponAbe2.chr21 C 0 C 0 e rheMac3.chr3 168631421 4 - 198365852 I e chlSab2.chr2 15080232 4 - 90373283 I e macFas5.chr3 162295930 0 - 192294377 C e papAnu2.chr3 150990094 483 - 180432695 I e nomLeu3.chr25 4518612 368 + 32716333 I a score=376304.000000 s hg38.chr21_KI270874v1_alt 149554 204 + 166743 ttcagtattcttaaagaaaagaattttcagccaagaattttatatctagccaaagtaaacttcataagcaaataagagccttttcagacaagcaagtgctaagggaattcattaacaccaaatgcgttacaaaagatcctgaagggagtgctaaatataggcaggaaagactgctgccagccagtacaaaaacatacttaagta s panTro4.chr21 3762626 204 + 32799110 ttcagtattcttaaagaaaagaattttcagccaagaattttatatccagccgaagtaaacttcataagcaaataagagccttttcagacaagcaagtgctaagggaattcattaacaccaaatgcgttacaaaagatcctgaagggagtgctaaatataggcaggaaagactgctgccagccagtacaaaaacatacttaagta i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 17031705 204 + 48394510 ttcagtattcttaaagaaaagaattttcagccaagaattttatatccagccaaagtaaacttcataagcaaataagagccttttcagacaagcaagtgctaagggaattcattaacaccaaatgcgttacaaaagatcctgaagggagtgctaaatacaggcaggaaagactgctgccagccagtacaaaaacatacttaagta i ponAbe2.chr21 C 0 C 0 s rheMac3.chr3 168631425 204 - 198365852 ttcagtattcttaaagaaaataattttcaaccaagaattttatatccagccaaagtaagcttcataagcaaataagagccttttcagacaagcaagtgctaagggaattcattaataccaaatgcattacaaacgatcctgaagggagtgctaaatatggacagaaaagactgctgccagccagtacaaaaacttgcttaagta i rheMac3.chr3 I 4 C 0 s macFas5.chr3 162295930 204 - 192294377 ttcagtattcttaaagaaaataattttcaaccaagaattttatatccagccaaagtaagcttcataagcaaataagagccttttcagacaagcaagtgctaagggaattcattaataccaaatgcattacaaacgatcctgaagggagtgctaaatatggacagaaaagactgctgccagccagtacaaaaacttgcttaagta i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150990577 204 - 180432695 TTcagtattcttaaagaaaataattttcaaccaagaattttatatccagccaaagtaagcttcataagcaagTAAGagccttttcagacaagcaagtgctaagggaattcattaatACCAAATGCATTACAAAAGATCCTgaagggagtgctaaatatggacAAAAAAGACTGCTGCCAGCCAGTACAAAAACTTGCTTAAGTA i papAnu2.chr3 I 483 C 0 s chlSab2.chr2 15080236 204 - 90373283 ttcagtattcctaaagaaaataattttcaaccaagaattttacatccagccaaagtaagcttcataagcaaataagagccttttcagacaagcaagtgctaagggaattcattaataccaaatgcattacaaaagatcctgaagggagtgctaaatatgtacagaaaagactgctgccagccagtacaaacacttgcttaagta i chlSab2.chr2 I 4 C 0 e nomLeu3.chr25 4518612 368 + 32716333 I a score=59863.000000 s hg38.chr21_KI270874v1_alt 149758 25 + 166743 catggacctgtaatgctataaagct s panTro4.chr21 3762830 25 + 32799110 catggacctgtaatgctataaagct i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 17031909 25 + 48394510 catggacctgtaatgctataaagct i ponAbe2.chr21 C 0 C 0 s nomLeu3.chr25 4518980 25 + 32716333 caaggaccTGTAATGCTATAAAGCg i nomLeu3.chr25 I 368 I 30 s rheMac3.chr3 168631629 25 - 198365852 catggacctgtaatgctttaaagct i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162296134 25 - 192294377 catggacctgtaatgctttaaagct i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150990781 25 - 180432695 CATGGACCTGTAATGCTTTAAAGCT i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15080440 25 - 90373283 catggacctgtaatgctttaaagct i chlSab2.chr2 C 0 C 0 a score=50120.000000 s hg38.chr21_KI270874v1_alt 149783 29 + 166743 accacataaccaagtctgaataataaaca s panTro4.chr21 3762855 29 + 32799110 accacataaccaagtctgaataaaaaaca i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 17031934 29 + 48394510 accacataaagaaatctgaataataaaca i ponAbe2.chr21 C 0 C 0 s rheMac3.chr3 168631654 29 - 198365852 accacataaacaagtctgaataataaaca i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162296159 29 - 192294377 accacataaacaagtctgaataataaaca i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150990806 29 - 180432695 ACGACATAAACAAGTCTGAATAATAaaca i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15080465 29 - 90373283 accacataaacaagtctgaataataaaca i chlSab2.chr2 C 0 C 0 e nomLeu3.chr25 4519005 30 + 32716333 I a score=7294441.000000 s hg38.chr21_KI270874v1_alt 149812 3135 + 166743 gct-aataacgtgatgacagg---atgaaatccatacatgtaagtactaaccttgaatgtaaacaagataaa---tgccctcaa----aagacagagtgacaagttggataaagaagcaaaactgtcttcaagggactcatgtgcaatgaaacccataggcccaaaacaaagggatggagaaaaatctaccaagcaaatggaaaccag---aaaaaaaaa--gggggttgctatttgaattttggacaaaacagattttaaactaaaaaagatcaataaagacaaggaagagcattacataatagtaaaggacttaattcaacaagaaaacttaactatcctaaatatatatgcacctaacacaggagcacctggatttataaagcaagttgttaaaaaccaatgaagacatttaaataaccacataataatagtgggaaacacttaagaccccagtgacagttttaaatcatcaaagcagaaaactaagaaaggtatttgggaccttaattcaacacttgaacaaagggacctatagacatctacagaactctccatccaaaaacaacagaatatacattcttctcatctgcacatggcacatactttaaaatcaataacacaatcagccat-aaaaa--atcttcaccaaattttaaaaaacagaaattataccaaccacatactcagaccacagcacaataaaaatagaaataaatgagaagaaagtcactcaaaaccatagaagtgcatggaaattaaatgacttcatcccaaatgacttctgggtaagtaataaaattaaggcagaaataaagaaattatttgaaactaatgaggaaaaagatacaacataccagaatctgtgggatacagccaatgcagtgttaagaggaaattttatagcactaaatgtccacatcaaaaagttggaaagatctcaaattaccaacctaatatcacaacacatcagaactagggaagcaagagcaaatccaccccgaagctagcagaagaaaagaaattagaaaattagagctgagctaaaggaaattgatgtaaaacacacacacacaccacacacacacacacacaaacacaca----cacacacacaaaagac-aaagaatccaggaactggttctttg-aaaaaaaa-taagatagatagaccactagctagtctaataaag-aaaaaaagagagaatatccaaataaacccatcagaaatgataaatggaatgttaccattaccccacataaatacaaatgccctcagagactattatggacacttctatacacagaagctagaaagcctaaaagaaatggatagattactgtaaacatacaacctcccaagattgaaccaggaagagattgaatccttaaacagacaaacaatgaattgtgaaattgaatcagtaataaaaagcccaccaatcaagaacagatgaatccatagacaaaatctaccaaatggataaggaagagctggtaccatttctaccaaaatgattccaaaagattgaggaggagaacctcctccttaactcattctatgaggcgagcatcatcctgataacaaaacctggcagagacacaatgaaaaaagt-caacttcaggtcaatatacttaatgaacatcagtgtaaaaattctcaacaaattatttgcaaggtgaatctagcagcacatcaaaaatctaatccaccatgattaagtatgctttatccctgggatgcaagtttgattcaacatatgcaaatcaagaaatgtgattcaccacataaactgtactaaaaacaaaaaccacataattaacacaacaaatgtagaaaaggctttcaataaaatttaacatctctttatgttgcaaaccctaaacaaactaggcattaaaggaacataattcaaaataaagaggcatctatgaaaaactcacatccaacatcatactgtatcaacaaaagctgtaagcattttccttgaaaactagaacaagacaaggatgccctctctcaccacttctattaaacatagtgttggaagtcctaaccagagcaatcaggtaagagaaagaaataaaaggcatccaaatgggaagagaggaagtcaaaatatctctgtttgcagatgacatgattctatacctagaaaacctaatagtctctgcccaaaagctccttgatttgatacacaacttcagtatagtttcaggatacaaaatcaatgtacaaaaattactagcattcctatacaccaacagcatccaagctgagagacaaatcaagaacacaatcccattcacaatagccacaaaaagaatgaaatacctaagaatacagctaactaggaagctgaaaaacctatacaatgagaattacaaaacactgctcaaagaagtcagaatgccaaaaagaaatggaaaaacattccacgttcatgaataggacaaatcaatattgttgaaatggccatactgcccaaaccaatttacagattgaatgctattcatgttaaactacaaatgacattctttacagaactag----aaaaaactattttaaaatttatatgaaaTTGAGGGCCCAGGGCCCAG-------ATGGGCCAGAAGTGGCCAGATGCAGGCAGGGTGGGCACCTGGACACCTGCCTTGGGTGCCTTGCTGCCCAGATGGTGGCAGTGGTGGCCACACATGCGGCCCAGCTTCTGTCCTCACGTTCCTCCAGCTCCCAGCCCCC-ACACCATGTCACCGCCTGTGCTGCCCACCGAGTTGGTGCCTTCAGAGTGCATTGTGGTGCTGCTGTCCTGTGCATTCTTTGTGCTCAGCTCAGGCCTGCTGGTGGCCATGTGCACCCTGTGGCCCGACCTGTGAAGCCAGGCACAGTGCCTGCTGCTCTTCCTGTCACTGGCCAACCTGCTCTCAGCTGCCTCCTACTTCTATGGGATGCTGCAGGACTTCGCAGGCTGTCATGGAACTGCATGCTGCAAGGTGTGCTGTCCACCCTCACCAACACCAGCTCATTCTTCTGGACTGTGGCCATCATACTATACCTGTACCTCAGGATCACTAGCACCGTGCAGGCCCTGCACCAACCATCTGCTCTGAGCCTTCCATGTCATCAGGTGATCTTGACTTTCCAGAGTTCAGCTGTTCTGAGATTG s panTro4.chr21 3762884 3153 + 32799110 gct-aacaacgtgatgacagg---atgaaatccatacatgtaagtactaaccttgaatgtaaacaagataaa---taccctcaattaaaagacagagtgacaagttggataaagaagcaaaactgtcttcaagagactcatgtgcaatgaaacccataggcccaaaataaagggatggagaaaaatctaccaagcaaatggaaaccag---aaaaaaaaaaggggggttgctatttgaattttggacaaaacagattt-aaagtaaaaaagatcaataaagacaaggaagagcattacataatagtaaaggacttaattcaacaagaagacttaactatcctaaatatatatgcacctaacacaggagcacctggatttataaagtaagttgttaaaaaccaatgaagacattcaagtaaccacataataatagtgggaaacacttaagaccccagtgacagttttaaatcatcaaagcagaaaactaagaaaggtatttgggaccttaattcaacacttgaacaaagggacctatagacatctacagaactctccatccaaaaacaacagaatatacattcttctcacctgcacatggcacatactttaaaatcaataacacgatcggccat-aaaaa--atcttcaccaaattttaaaaaacagaaattataccaaccacatactcagaccatagcacaataaaaatagaaataaatgagaagaaagtcactcaaaaccatagaagtgcatggaaattaaatgacttcatcccacatgacttctgggtaagtaataaaattaaagcagaaataaagaaattatttgaaactaatgaggaaaaagatacaacataccagaatctgtgggatacagccaatgcagtgttaagaggaaagtttatagcactaaatgcccacatcaaaaagttagaaagatctcaaattaccaacctaatatcacaacacatcagaactagggaagcaagagcaaatccaccccaaagctagcagaagaaaagaaattagaaaattagagctgagctaaaacaaattgatgtaaaacacacacacacaccacaaacacacacacacaaacacacatacacacacacacaaaagat-aaagaatccaggaactggttctttg-aaaaaaaaataagatagatagaccactagctagtctaataaag-aaataaagagagaatatccaaataaacccatcagaaatgacaaatggaatattaccataacaccacataaatacaaatgccctcagagactattatggacacctctatacacacaagctagaaagcctaaaagaaatggatagattactgtaaacatacaacctcccaagattgaaccaggaagagattgaatccttaaacagacaaacaatgaattgtgaaattgaatcagtaataaaaagcccaccaatcaagaacagatgaatccatagccaaaatctaccaaatgtataaggaagagctggtaccatttctaccaaaatgattccaaaagattgaggaggagaacctcctccttaactcattctatgaggccagcatcatcctgaaaacaaaacctggcagagacacaatgaaaaaagt-caacttcaggtcaatatacttaatgaacatcagtgtaaaaattctcaacaaattatttgcaagctgaatctagcagcacatcaaaaatctaatccaccatgattaagtatgctttatccctgggatgcaagtttgattcaacatatgcaaatcaagaaatgtgattcaccacataaactgtactaaaaacaaaaaccacataattaacacaataaatgtagaaaaggctttcaataaaatttaacatctctttatgttgcaaaccctaaacaaactaggcattaaaggaacataattcaaaataatgaggcatctaggaaaaactcacatccaacatcatactgtatcaacaaaagctgtaagcattttccttgaaaactagaacaagacaaggatgccctctctcaccacttctattaaacatagtattggaagtcctaaccagagcaatcaggtaagagaaagaaataaaaggcatccaaatgggaagagaggaagtcaaaatatctctgtttgcagatgacatgattctatacctagaaaacctaatagtctctgcccaaaagctccttgatttgatacacaacttcagtatagtttcaggatacaaaatcaatgtacaaaaattactagcattcctatacaccaacagcatccaagctgagagacaaatcaagaacacaatcccattcacaatagccacaaaaagaatgaaatacctaagaatacagctaactaggaagctgaaaaacctctacaatgagaattacaaaacactgctcaaagaaatcagaatgccaaaaagaaatggaaaaacattccacattcatgaataggacaaatcaatattgttgaaatggccatactgcccaaaccaatttacagattgaatgctattcatgttaaactacaaatgacattctttacagaactag----aaaaaactattttaaaacttatatgaaaTTGAGGGCCCAGGGCCCAGGGCCCAGATGGGCCAGAAGTGGCCAGATGCAGGCAGGGTGGGCACCTGGACACCAGCCTTGGGTGCCTTGCTGCCCAGATGGTGGCAGTGGTGGCCACACATGCGGCCCAGCTTCTGTCCTCACGTTGCTCCAGCTCCCAGCCCCCCACACCATGTCACCACCTGTGCTGCCCACCGAGTTGGTGCCTTCAGAGTGCATTGTGGTGCTGCTGTCCTGTGCACTCTTTGTGCTCGGCTCAGGCCTGCTGGTGGCCATGTGCACCCTGTGGCCCGACCTGTGAAGCCAGGCACAGTGCCTGCTGCTCTTCCTGTCACTGGCCAACCTGCTCTCAGCTGCCTCCTACTTCTATGGGGTGCTGCAGGACTTTGCAGGCTGTCATGGAACTGCATGCTGCAAGGTGTGCTGTCCACCCTCACCAACACCAGCTCATTCTTCTGGACTGTGGCCATCATACTATACCTGTACCTCAGGATCACTAGCACCGTGCAGGCCCTGCACCAACCATCTGCTCTGAGCCTTCCATGTCATCAGGTGATCTTGACTTTCCAGAGTTCAGCTGTTCTGAGATTG i panTro4.chr21 C 0 C 0 s ponAbe2.chr21 17031963 3130 + 48394510 gct-aacaacgtgatgacagg---atgaaatccatacatgtaactactaaccttgaatgtaaacaagataaa---tgccctcaattaaaagacagagtgacaagttggataaagaagcaaaactgtctacaagagactcatgtgcaatgaaatccataagcccaaaataaagggatggagaaaaatctaccaggcaaatggaaaccag---aaaaaaag---gggggttgctatttgaattttggacaaaacagattttaaactaaaaaagatcaataaagacaaggaagagcattatataatagtaaaggacttaattcaacaagaagacttaactatcataaatatacatgcacctaacacaggagcacctggatttataaagcaagttgttaaagaccaacgaagacatttaaataaccacataataatagtgagaaactcttaagaccccagtgacagctttaaatcatcaaagcagaaaactaagaaaggtatttgggaccttaattcaacacttgaacaaagggacttatagacatctacagaactctccatccaaaaacaacagaatatacattcttctcatctgcacatggcacatactttaaaatcgataacacaatcggccat-aaaaa--atcttcaccaaattttaaaaaacagaaattataccaaccacatactcagaccacagcacaataaaaatagaaataaataataagaaagtcactcaaagccatagaagtgcatggaaattaaatgacttcatcccaattgacttctgggtaagcaataaaattaaggcagaaattaaaaaattatttgaaactaatgaggaaaaagatacaacataccagaatctgtgggatacagccaatgcagtgttaagaggaaagtttatagcactaaatgcccacatcaaaaagttagaaagatctcaaattaccaacctaatatcacaacacatcagaactagggaagcaagagcatatctaccctgaagctagcagaaaaaaagaaattagaaaattagaactgagctaaaggaaattgatgtaaaacacacacacacac----accacacacacacaaacaca------cacacacacaaaagat-aatgaatccaggaactggttcttta-aaaaaaaa-taagatagatagaccactagctagcctaataaag-aaaaaaagagagaatatccaaataaacccatcagaaatgataaatggaatgttaccataaccccacagaaatacaaatg-cctcagagactattatggacacctctatacacacaagctagaaagcctaaaagaaatggatagactactgtaaacatacaacctcccaagattgaaccaggaagagattgaatccttaaacagacaaacaatgaattgtgaaattgaatcagtaataaaaagcccaccaatcaagaacagatgaattcatagccaaaatctaccagatgtataaggaagagctggtaccatttctaccaaaatgattccaaaagattgaggaggagaacctcctccttaactcattctatgaggccagcatcatcctgataacaaaacctggcagagacacaatgaaaaaaga-caacttcaggtcaatatacttaatgaacatcaatgtaaaaattctccacaaattatttgcaatctgaatctagcagcacatcaaaaatctaatccaccatgattaagtatgctttatccctgggatgcaagtttgattcaacatatgcaaatcaataaatgtgattcaccacataaactgtactaaaaacaaaaaccatataattaacataataagtgtagaaaaggctttcaataaaatttaacatctctttatgttgcaaaccctaaacaaactaggccttaaaggaacataattaaaaataatgaggcatctatgaaaaactcacatccaacatcatactgtatcaacaaaagctgtaagcatattccttgaaaactagaacaagacaaggatgccctctctcaccacttctattaaacatagtactggaagtcctagccagagcaatcaggtaagagaaagaaataaaagtcatccaaatgggaagagaggaagtcaaaatattcctgtttatagatgacatgattctataccttgaaaacctaatagtctctgcccaaaagctccttgatttgatacacaacttcagtatagtttcaggatacaaaatctatgtacaaaaattactagcatttctatacaccaacagcatccaagctgagagacaaatcaagaacacaatcccattcacaatagccacaaaaggaatgaaataccgaagaatacagctaactcggaagctgaaagacctctacaatgagaattacaaaacactgctcaaagaagtcagaatgccaaaaagaaatggaaaaacattacatgttcatgaataggacaaatcaatattgttgaaatggccatactgccccaagcaatttacagattgaatgttattcatgttaaactacaaatgatgttctttacagaactag----aaaaaactattttaaaatttatatgaaatcgagggcccagag-ccaG-------ATGGGCCAGAAGTGGACAGATGCAGGCAGGGTGGGCACCTGGACGCCAGCCTTGGGTGCCTTGCTGCCCAGATGGTGGCAGTGGTGACTGCACATGCGGCCCAGCTTCTGTCCTCATGTTGCTCCAGATCCCAGCCCCCCACACCATGTCACCACCTGTGCTGCCCACCGAGTTTGTGCCTTCAGAGTGCATTATGGTGCTGCTGTCCTGTGCACTCTTTGTGCTTGGCTCAGGCCTGCTGGTGGCCATGCACACCCTGTGGCCCAACCTGTGCAGCCAGGCACAGCACCTGCTGCTCTTCCTGTCACTGGCCAACCTGCTCTTGGCTGCCTCCTACTTCTATGGGGTGTGGCAGGACTTTGCAGGCTGTCATGGAACTGCATGCTGCAAGGTGTGCTATCCACCCTCACCAACACCAGCTCATTCTTCTGGACTGTGGCCATCATACTCTACCTGTACCTCAGGATCATTAGCACCATGCAGGCCCTGCACCAACC-TCTGCTCTGAGCCTTCCATGTCATCAGGTGATCTTGACTTTCCAGAGTTCAGCTGTTCTGAGATTG i ponAbe2.chr21 C 0 N 0 s nomLeu3.chr25 4519035 3130 + 32716333 gctaaatgacgagttaatgggtgcaggaaatccatacatgtaactactaacct---atgtaacaaacctgcacattgtcctcaattaaaagacagagtgataagatataaaaaaaaaaaaaaaaa----caagagactcatgtgcaatgaaacccataagcccaaaataaagggatggagaaaaatctaccaagcaaatgaaaaccag---aaaaaaaa---gggggttgctatttgaattttggacaaaacagattttaaactaaaaaagatcagcaaagacaaggaagagcattacataatagtaaaggacttaattcaacaagaagacttaactatcctaaatatatatgcacctaacacaggagcacctggatttataaagcaagttgttaaagaccgattaagacatttaaataacaacataataatagtgggagactcttaagaccccagtgacagttttaaatcatcaaagcagaaaactaacaaaggtatttgggacattaattcaacacttgaacaaatggacctatagacatctacagaactttccatccaaaaacaacagaatatacattcttctcatctgcacatggcacatactttaaaatcaataacgcaatcggccataaaaaa--atcttcaccaaattttaaaaaacagaaattataccaaccacatactcagaccacagcacaataaaaatagaaataaataataaaaaactcactcaaaaccatagaagtgcatggaaattaaatgacttcatcccaaatgacttctggataagtaataaaattaaggcagaaataaagaaattatttgaaactaatgaggaaaaagatacaacataccagaacctctgggatacagccaatgcagtgttaagaggaaagtttatagcactaaatgcccacatcaaaaagttagaaagatctcaaattaccaacctaatatcacaacacatccgaactaggggagcaagagcaaatccaccctgaagctagcagaagaaaagaaattagaaaattagagctgagctaaaggaaattgatgtaaaacacgcacacac------gacacacacacacaaacacaca----cacacacacaaaagatcaatgaatccaggaactggttctttg-aaaaaaaaataagatagatagaccactagctagtctaataaag-aa--aaagagagaatatccaaataaacccatcagaaatgataaatggaatcttaccataaccccacagaaatacaaataccctcagagactattatggacacctcgatacacacaagctagaaagcctaaaagaaatggatagattactataaacatacaacctcccaagattgaaccaggaagagattgaatccttaaacag----acaatgaattctgaaattgagtcagtaataaaaagcccaccaatcaagaacagatgaattcatagccaaaatctatcagatgtagaaggaagagctggtaccatttctaccaaaatgattccaaaagattgaggaggagaacctcctccttaacaaattctatgaggccaccatcatcctgataacaaaacctggcagagacacaatgaaaaaaataccacttcaggtcaatatatttaatgaacatt-gtgtaaaaattctcaacaaattatttgcaagctgaatctagcagcacatcaaaaatctaatccaccatgattaagtatgctttatccctgggatgcaagtttgattcaacatatgcaaattaataaatgtgattcaccatataaactgaactaaaaacaaaaaccacataattaacacaataaatgtagaaaaggctttcaataaaatttaacatctctttatgttgtaaaccctaaacaaactaggcattaaaggaacataattcaaaataatgaggcatctataaaaaactcacatacgacatcatactgaatcaacaaaagctataagcattttccttgaaaactagaataagacaagaatgccctccctcaccacttctactaaacatagtactggaagtcctagccagagcaatcaggtaagagaaagaaataaaaggcatccaaatgggaagagaggaagtcaaaatatccctgtttgcagatgacatgattctatacctagaaaacctaatagtctctgcccaaaatctccttgatttgatacacaacttcagtatagtttcagaatacaaaatcaatgtacaagaattactagcattcctatacaccaacagcatccaagctgagagacaaatcaagaacacaatcccattcacaatagccacaaaaagaatgaaatacctaagaatacagctaactaggaagctg-aagacctctacaatgagaattacaaaacactgctcaaagaagtcagaatgccaaaaagaaatgggaaaacattccatgttcatgaataggacaaatcaatattgttgaaatggtcatactgcccaaggcaatttacagattgaatgctattcatgttaaactacaaatgacgttctttacagaactag--aaaaaaaactattttaaaatttatatgaaaTTGAGGGCCCAGGACCCAG-------ATGGACCAGAAGTGGCCAGACGCAGGCAGGGTGGGCATCTGGATGCCAGCCTTGGGTGCCTTGCTGCCCAGATGGTGGCAGTGGTGGCTGCATGTGCAGCCCAGCTTCTATCCTCATGTTGCTCCAGCTCCCAGCCCCC-ACGCCATGTCACTGCCTGTGCTGCCCACCGAGTTGGTGCCTTCAGAGTACATTGTGGTGCTGCTGTCCTGTGCACTCTCTGTGCTCAGCTCAGGCCTGCTAGTGTCCATGCATACCCTGTGGCCCGACCTGCGCAGCTGGGCACAGCACCTGCTGCTCTTCCTGTCACTGGCCAACCTGCTCTTGGCTACCTCCTACTTCTATGGGGTACTGCAGGACTTCATGGGCTGTCATGGAACTGTGTGCTGCAGGGTGTGCTGTCCACCCTCACCAACACCAGCTCCTTCTTCTGGGCCGTGGCAATCATACTCTACCTTTACCTCAGGATCATTCGCACTGTGCGGGCCCTGCACCAACCATCTGCTCTGAGCCTTCCATGTCATCAGGTGATCTTGACTTTCCAGAGTTCAGCTGTTCTGAGTTTG i nomLeu3.chr25 I 30 C 0 s rheMac3.chr3 168631683 3127 - 198365852 gct-aacaacgtgatgacagg---atcaaatccatacatataaatactaactttgaatgtaaacaagatcaa---tgcccccaattaaaagacagagtgtcaagttggataaagaagcaaaactgtcttcaagagactcatgtgcaatgaaacccataagctcaaaataaagggatggagaaaaatctaccaagcaaatggaaaccagaaaaaaaaaaa---aagggttgctatttgaatttcagac-aaacagattttaaacttaaaaagatcaataaagacaaggaagagcattacatagtagtaaaggacttaattcaacaagaagacttaactatcctaaatatatatgtacccaacacaggagcacctggatttacaaagcaagttgttagagaccaatgaagacatttaaatagccacataataataatgggagactcttaacacca-agtgacagttttaaatcatcaaagtagaaaactaacaaaggtatttgagaccttaactcaacacttaaacaaatggacctatagacatctacagaactctccatccaaaaacaacagaatataca---ttctcatctgcacatggcacatactttaaaatcaataacacaatcggccac-aaaaaacatcttcaccaaattttaaaaaacagaaattatatcaaccacatactcagaccacagcacaataaaaatagaaataaataataagaaagtcacttaagaccatagaagtgaatggaaattaaatgacttcatcccaaatgacttctgggtaagtaataaaattaaggcagagataaagaaattatttgaaagtaatgaggaaaaagatagaacataccagaatctctgggatacggccaatgcagtgttaagaggaaagtttatagcactaaatgcccacaacaaaaagttagaaagctctcaaattactaacctaacatcacaacacctcagaactagggaaacaagagaaaatccaccctgaagctagcagaagaaaagaaattagaaaattagagctgagctaaaggaaattgatgtaaaacacac-------------acacacacacacacacacaca----cacacacacacgagatcaatgaatccaggaactggttctttg-aaaaaaag-taagatagatagaccactagttagactaataaagaaaaaaaagagagaatatccaaataagcccatcagaaatgataaacggaatgttaccacaacctcacagaaatacaaataccctcagagactattatggatacctctatacacacaagctagaaagcctaaaagaaatggatagattactataaacacacaacctcccaagattgaaccaggaagagattgaacccttaaacagacaaacaatgaattgtgaaattgaatcagtaataaaaggcccgtgaaccaagaacagatgaattcatagccaaaatctaccagatgtataaggaagagctggtaccatttctactgaaatgattccaaaagattgaggaggagaatctcctccttaactcattctatgaggccagcatcatcctgataacaaaacctggtggagacacaatgaaaaaaga-caacttcaggtcaatatacttgatgaatatc-gggtaaaaattcttgataaaatatatgcaagtggaatctagcagcacatcaaaaatcgaaaccaccatgattaagtatgctttatccctgggatgcaagtttggttcaacatatgcaaatcaataaatgtgattcaccacataaactgtactaaaaacaaaaaccacataattatcacaataaatgtagaaaaggttttcaataatatttaacatctcttcatctggcaaaccctaaacaaactaggcattaaaggaacatacttcaaaataatgaggcatctatgaaaaa--cacatccaacatcatacttaatcaacaaaagctataagcattttccttgaaaactgtaacaagacaaggataccctctctcaccactgctattaaacatagtactggaagccttagccagagcaatcagataagagaaagaaatgaaaggcatccaaataggaagagaggaagtcaaaatatccctgtttgcagatgacttgattctacatatggaaaacctaacagttcctgcccaaaagctccttgatttgatacacaacttcagtatagtttcaggatacaaaatcaatgcacaaaaattactagcact-ctatacaccaacagcatgcaagctgagagacaaatcaagaacacaatcccattcacaatagccacaaaaagaatgaaatacctaagaatacatctaactaggaagctgaaagacctctacaatgagtattacaaaacactactcaaagaagtcagaatgccaaaaagaaatggagaaatattccatgttcatgaataggacaaatcaatattgttgaaatggccatactg-ccaaagcaatttacagattgaatgccattcatgttacactataaatgatgttctttacagaactagaaaaaaaaaactatattaaaatttatatgaaatcaagggcccAGGGCCTAG-------ATGGGCCAGAATCAGCCAGACGCTGGCAGGGTGGGCACCTGGACGCCAGCCTCAGGTGCCTTGCTGCCCAGATGGTGGCAGTGGTGGCCACACGTGCAGCCCAGCTTCTGTCCTCATGGTGCTCCAGCTCCCAGTCCCCCACAGCATGTCACCACCTGCACTGCCCACCAAGTTGGCGCCTTCAGAGTGCATTGTGGTGCTGCTGTCCTGTGCACTCTCTGTGCTTGGCTCAGGCCTGCTGGTGCCCACACACACCCTGTGGCCCGACCTGTGCAGCTGGGCACAGCACCTGCTGCTCTTCCTGTCACTGGCCAACCTGCTCTTGGCCACCTCCTACTTCTATGGGGTGCTGCAGGACTTCATAGGCTGTCATGGAACTGCATGCTGCAGGGTGTGCTGTCCACCCTCGCCAACACCAGCTCCTTCTTCTGGACCGTGGCCATCGTACCCTACCTGTACCTCAGGATCATTCGCACCATGCAGGCACTGCACAAACCATCTGCTCTGAACCTTCCACGTCATCAGGTGATCTTGACTTTCCAGAGTTCATCTGTTCTGAGATTG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162296188 3114 - 192294377 gct-aacaacgtgatgacagg---atcaaatccatacatataaatactaactttgaatgtaaacaagatcaa---tgcccccaattaaaag--agagtgtcaagttggataaagaagcaaaactgtcttcaagagactcatgtgcaatgaaacccataagctcaaaataaagggatggagaaaaatctaccaagcaaatggaaaccag----aaaaaaa---aagggttgctatttgaatttcagac-aaacagattttaaactaaaaaagatcaataaagacaaggaagagcattacatagtagtaaaggacttaattcaacaagaagacttaactatcctaaatatatatgcacccaacacaggagcacctggatttacaaagcaagttgttagataccaatgaagacatttaaatagccacataataataatgggagactcttaacacca-agtgacagttttaaatcatcaaagcagaaaactaacaaaggtatttgagaccttaactcaacacttaaacaaatggacctatagacatctacagaactctccatccaaaaacaacagaatacacattcttctcatctgcacatggcacatactttaaaatcaataacacaatcggccac-aaaaaacatcttcaccaaattttaaaaaacagaaattatatcaaccacatactcagaccacagcacaataaaaatagaaataaataataagaaagtcacttaagaccatagaagtgaatggaaattaaatgacttcatcccaaatgacttctgggtaagtaataaaattaaggcagagataaagaaattatttgaaagtaatgaggaaaaagatagaacataccagaatctctgggatacggccaatgcagtgttaagaggaaagtttatagcactaaatgcccacaacaaaaagttagaaagctctcaaattactaacctaacatcacaacacctcagaactagggaaacaagagaaaatccaccctgaagctagcagaagaaaagaaattagaaaattagagctgagctaaaggaaattgatgtaaa-----------------------acacacacacacacaca----cacacacacacgagatcaatgaatccaggaactggttctttg-aaaaaaag-taagatagatagaccactagttagactaataaagaaaaaaaagagagaatatccaaataagcccatcagaaatgataaacggaatgttaccacaacctcacagaaatacaaataccctcagagactattatggatacctctatacacacaagctagaaagcctaaaagaaatggatagattactataaacacacaacctcccaagattgaaccaggaagagattgaacccttaaacagacaaacaatgaattgtgaaattgaatcagtaataaaaggcccgtgaaccaagaacagatgaattcatagccaaaatctaccagatgtataaggaagagctggtaccatttctactgaaatgattccaaaagattgaggaggagaatctcctccttaactcattctatgaggccagcatcatcctgataacaaaacctggtggagacacaatgaaaaaaga-caacttcaggtcaatatacttgatgaatatc-gggtaaaaattcttgataaaatatatgcaagtggaatctagcagcacatcaaaaatcgaaaccaccatgattaagtatgctttatccctgggatgcaattttggttcaacatatgcaaatcaataaatgtgattcaccacataaactgtactaaaaacaaaaaccacataattatcacaataaatgtagaaaaggttttcaataatatttaacatctcttcatctggcaaaccctaaacaaactaggcattaaaggaacatacttcaaaataatgaggcatctatgaaaaa--cacatccaacatcatacttaatcaacaaaagctataagcattttccttgaaaactgtaacaagacaaggataccctctctcaccactgctattaaacatagtactggaagccttagccagagcaatcagataagagaaagaaataaaaggcatccaaataggaagagaggaagtcaaaatatccctgtttgcaaatgacttgattctacatatggaaaacctaacagtctctgcccaaaagttccttgatttgatacacaacttcagtatagtttcaggatacaaaatcaatgtacaaaaattactagcact-ctatacaccaacagcatgcaagctgagagacaaatcaagaacacaatcccattcacaatagccacaaaaagaatgaaatacctaagaatacatctaactaggaagctgaaagacctctacaatgagtattacaaaacactactcaaagaagtcagaatgccaaaaagaaatggagaaatattccatgttcatgaataggacaaatcaatattgttgaaatggccatactg-ccaaagcaatttacagattgaatgccattcatgttacactataaatgatgttctttacagaactagaaaaaaaaaactattttaaaatttatatgaaatcaaGGGCCCAGGGCCTAG-------ATGGGCCAGAATCAGCCAGACGCTGGCAGGGTGGGCACCTGGACGCCAGCCTCAGGTGCCTTGCTGCCCAGATGGTGGCAGTGGTGGCCACACGTGCAGCCCAGCTTCTGTCCTCATGGTGCTCCAGCTCCCAGTCCCCCACAGCATGTCACCACCTGCACTGCCCACCAAGTTGGCGCCTTCAGAGTGCATTGTGGTGCTGCTGTCCTGTGCACTCTCTGTGCTTGGCTCAGGCCTGCTGGTGCCCACACACACCCTGTGGCCCGACCTGTGCAGCTGGGCACAGCACCTGCTGCTCTTCCTGTCACTGGCCAACCTGCTCTTGGCCACCTCCTACTTCTATGGGGTGCTGCAGGACTTCATAGGCTGTCATGGAACTGCATGCTGCAGGGTGTGCTGTCCACCCTCGCCAACACCAGCTCCTTCTTCTGGACCGTGGCCATCGTACCCTACCTGTACCTCAGGATCATTCGCACCATGCAGGCCCTGCACCAACCATCTGCTCTGAACCTTCCACGTCATCAGGTGATCTTGACTTTCCAGAGTTCAGCTGTTCTGAGATTG i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150990835 3138 - 180432695 gct-aacaacatgatgacagg---atcaaatccatacatataaatactaactttgaatgtaaacaaGATCAA---TGccctcaattaaaagacagagtgtcaagttggataaagaagcaaaactgtcttcaagagactcatgtGCAGTGAAAcccataagctcaaaataaagggatggagaaaaatctaccaaccaaatggaaaccag---aaaaaaaa---aagggttgctatttgaatttcagac-aaacagattttaaactaaaaaagatcaataaagaCAAGGAAGAGCATTACATAGTAGTAAAGGACTTAATTCaataagaagacttaactatcctaaatatatatgcacccaacacaggagcacctggatttataaagcaagttgtTAGAGACTAATGAAGACTTTTAAATaaccacataataataatgggagactctTAACACCACAGTGACAGTTTTAAATCATCAAAGCAGAAAACTAATAAAGGTATTCGGGACCTTAACTCAACACTTGAACAAATGGACctatagacatctacagaactctccatccaaaagcaacagaatatacattcttctcatctgcacgtggcacatactttaaaatcaataacaaaatcagccac-aaaaaacatcttcaccaaattttaaaaaacagaaattatatcaACCACAtactcagaccacagcacaataaaaatagaaataaataataagaaagtcACTTAAGACCATAGAAGTGAatggaaattaaatgactttATCCCAAATGACTTCTGGGTaagtaataaaattaaggcagaaataaagaaattatttgaaactgatAAGGAAAAAGATagaacatatcagaatctctgggatacagccaatgcagtgttaagaggaaagtttatagcactaaatgcccacaa-aaaaagttagaaaactcTCAAATTACTAACCTAACATCACAATACCTCAGAACTGGGGAAACGAGAGCAAATCCACCctgaagctagcagaagaaaagaaattagaaaattagagcTGAGCTAAAGGAAATTgatgtaaaacacacacacacac-atatacacacacacacacacacaca----cacacacacacaagatcaatgaatccaggaactggttctttgaaaaaaaag-taagatagatagaccactagttacactaataaag-aaaaaaagagagaatatccgAATAAGCACATCAGAAATGATAAACGGGATGTTACCAcaacctcacagaaatacaaataccctcagagactattatggaTACCTCTATACACACAAGCTAGAAagcctaaaagaaatggatagattACTATAAATATAcgacctcccaagattgaaccaggaagagaTTGAACTCTT-AACAGACAAACCATGAATtgtgaaattgaatcagtaataaaaagcccaTGAACCAAGAACAGATGAATTCATAGCCAAAATCTACCAGATGTataaggaagagctggtaccatttctactgaaatgaTTCCAAAAGATTGAGGAGGAGAatctcctccttaactcattctatgaggccagcatcatcctgataacaaaacctggtggagacacaatgaaaaaaga-caaCTTCAGGTCAATATACTTGATGAACATC-AGGTAAAAATTCTCGATAAAATATATGCAAGtggaatctagcagcacatcaaaaatcgaAACCACCATGATTAAGTatgctttatccctgggatgcaagtttggttcaacatatgcaaatcaataaatgtgattcaccacatgaACTGTActaaacacaaaaaccacataattatcacaataaatgcagaaaaggttttCAATAATATTTAACATCTCTTCATGTGGCAAACCCTAAACAAACTAGGCattaaaggaacatacttcaaaataatgaggcatctatgaaaaactcaCATCCAACATCATACTTAATCAACAAAAGCTATAAGCATTTTCCTTGAAAActgtaacaagacaaggataccctctctcaccactgctattaaacatagtactggaagccttagccagagcaatcagataagagaaagaaataaaaggcatccaaataggaagagaggaagtcaaaatatccctgtttgcagatgacttgattCTACACATGGAAAACCTaacagtctctgcccaaaagctccttgattTGATACACAACTTCAGTatagtttcaggatacaaaatcaatgtacaaaaattactagcatt-ctatacaccaacagcatgCAAGCTGAGAgacaaatcaagaacacaatcccactcacaatagccacaaaaagaatgaaatacctaagaatacatcTAACTAGGAAgctgaaagacctctacaatgagTATTACAAAACACTACTCAAAGAAGTCAGAATGccaaaaagaaatggagaaatattccatgttcatgactAGGACAaatcaatattgttgaaatggccatgctg-ccaaagcaatttacagattgaATGCCATTCATGTTAAACTATAAATGATgttctttacagaactag--aaaaaaaactattttaaaatttatatgaaatcaagGGCCCAGGGCCTAG-------ATGGGCCAGAATCAGCCAGACGCTGGCAGGGTGGGCACCTGGACGCCAGCCTCAGGTGCCTTGCTGCCcagatggtggcagtggtggccaCACGTCCAGCCCAGCTTCTGTCCTCATGGTGCTCCAGCTCCCAGTCCCCCACAGCATGTCACCACCTGCACTGCCCACCAAGTTGGTGCCTTCAGAGTGCATTGTGGTGCTGCTGTCCTGTGCACTCTCTGTGCTTGGCCCAGCCCTGCTGGTGCCCACACACACCCTGTGGCCCGACCTGTGCAGCTGGGCACAGCACCTGCTGCTCTTCCTGTCACTGGCCAACCTGCTCTCGGTCACCTCCTACTTCTATGGGGTGCTGCAGGACTTCGTAGGCTGTCATGGAACTGCATGCTGCAGGGTGTGCTGTCCACCCTCGCCAACACCAGCTCCTTCTTCTGGACCATGGCCATCATACCCTACCTGTACCTCAGGATCATTCGCACCATGCAGGCCCTGCACCAACCATCTGCTCTGAACCTTCCGTGTCATCAGGTGATCTTGACTTTCCAGAGTTCAGCTGTTCTGAGATTG i papAnu2.chr3 C 0 C 0 s chlSab2.chr2 15080494 3118 - 90373283 gct-aacaacgtgatgacagg---atcaaatccatacatataaatactaactttgaatgtaaacaagatcaa---tgcccccaattaaaagacagagtgtcaagttggataaagaagcaaaactgtcttcaagagactcatgtgcaatgaaacccataagctcaaaataaagggatggagaaaaatctaccaagcaaatggaaaccagaaaaaaaaaaa---aggggttgctatttgaatttcagac-aaacagattttaaactaaaaaagatcaataaagacaaggaggagcattacatagtagtaaaggacttaattcaacaagaagacttaactatcctaaatatatattcacccaacacaggagcacctggatttacaaagcaagttgttagagaccaatgaagacatttaaatagccgcataataataatgggagactcttaacacca-agtgacagttttaaatcatcaaagcagaaaactaacaaaggtatttgagaccttaaatcaacacttaaacaaatggacctatagacatctacagaactctccatccaaaaacaacagaatatacattcttctcatctgcacatggcacatactataaaatcaataacacaatcggccac-aaaaaacatcttcaccaaattttaaaaaacagaaattataccaaccacatactcagaccacagcacaataaaaataaaaataaataataagaaagtcactcaagaccatagaagtgaatggaaattaaatgacttcatcccaaatgacttctgggtaagtaataaaattaaggcagagataaagaaattatttgaaagtcatgaggaaaaagatagaacataccagaatctctgggatacagccaacgcagtgttaagaggaaagtttatagcactaaatgcccacaacaaaaagttagaaagctctcaaattactaacctaacatcacaacacctcagaactagggaaacaagagcaaatccactctgaagctagcagaagaaaagaaattagaaaattagagctgagctaaaggaaattgatgtaaa---------------------acacacacacacacacaca----cacacacacacgagatcaatgaatccaggaactggttctttg-aaaaaaag-taagatacatagaccactagttagactaataaagaaaaaa-----agaatatccaaataagcccatcagaaatgataaacggaatgttatcacaacctcacagaaatacaaataccctcagagactattatggatacctctatacacacaagctagaaagcctaaaagaaatggatagattactataaacatacaacctcccaagattgaaccaggaagagattgaacccttaaacagacaaacaatgaattgtgaaattgaatcagtaataaaaagcccgtgaaccaagaacagatgaattcatagccaaaatctaccagatgtataaggaagagctggtaccatttctactgaaatgattccaaaagattgagaaggagaatatcctccttaactcattctatgaggccagcatcatcctgataacaaaacctggtggagacacaatgaaaaaaga-caacttcaggtcaatatacttgatgaacatc-aggtaaaaattctcgataaaatatatgcaagtggaatctagcagcacatcaaaaatcgaaaccaacatgattaagtatgctttatccctgggatgcaagtttggttcaacatatgcaaatcaataaatgtgattcaccacataaactgtactaaaaacaaaaaccacataattatcacaataaatgtagaaaaggttttcaataatatttaacatctcttcatgtggcaaaccctaaacaaactaggcattaaaggaacatgcttcaaaataatgagacatctatgaaaaactcacatccaacatcatacttaatcaacaaaagctataagcattttccttgaaaagtgtaacaagacaaggataccctctctcaccactgctattaaacatagtactggaaaccttagccagagcaatcagataagagaaagaaataaaaggcatccaaataggaagagaggaagtcaaaatatccctgtttgcagatgacttgattctacatatggaaaacctaacagtctcttcccaaaagttccttgatttgatacacaacttcagtatagtttcaggatacgaaatcaatgtacaaaaattactagcatt-ctatacaccaacagcatgcaagctgagagacaaatcaagaacacaatcccattcacaatagccacaaaaagaatgaaatacctaagaatatctctaactaggaagctgaaagacctctacaatgagtatcacaaaacactactcaaagaagtcagaatgccaaaaagaaatggagaaatattccatgttcatgaataggacgaatcaatattgttgaaatggccatactg-ccaaagcaatttacagattgaatgccattcatgttaaactataaatgacgttctttacagaactag-gaaaaaaaactattttaaaatttatatgaaatcGAGGGCCCAGGGCCTAG-------ATGGGCCGGAATCAGCCAGACGCTGGCAGGGTGGGCACCTGGACGCCAGCCTCAGGTGCCTTGCTGCCCAGATGGTGGCAGTGGTGGCCACACGTGCAGCCCAGCTTCTGTCCTCATGGTGCTCCAGCTCCCAGTCCCCCACAGCATGTCACCACCTGCACTGCCCACCAAGTTGGTGCCTTCAGAGTGCATTGTGGTGCTGCTGTCCTGTGCACTCTCTGTGCTTGGCTCAGGCCTGCTGGTGCCCACACACACCCTGTGGCCCGACCTGTGCAGCTGGGCACAGCACCTGCTGCTCTTCCTGTCACTGGCCAACCTGCTTTTGGCCACCTCCTACTTCTATGGGGTGCCGCAGGACTTCGTAGGCTGTCATGGAACTGCATGCTGCAGGGTGTGCTGTCCACCCTCGCCAACACCAGCTCCTTCTTCTGGACCGTGGCCATCATACCCTACCTGTACCTCAGGATCATTCGCACCATGCAGGCCCTGCACCAACCATCTGCTCTGAACCTTCCATGTCATCAGGTGATCTTGACTTTCCAGAGTTCAGCTGTTCTGAGATTG i chlSab2.chr2 C 0 C 0 a score=9949487.000000 s hg38.chr21_KI270874v1_alt 152947 5671 + 166743 AAGTCAGGGGTGGAGGGCTGGTCTGGGGGTCTGGGAGTCCACCTGGAGTCTCTCTGAGAGTGAGGAAAAACCAAGACCTTACCCAGCAGTTCAAGCATCTTTCAAGTAAGCCTCACTGAAGAGGGTCAGCCCTTCCCTGGGGAATGTCAGGTTTTGAGAATCTCATGGCATTATGTGCTGAACTGTGGGCAAGAATCCTAGGGCTGTTTTCCTTTTCTCCTTCTCCCAGATCAGAGCATCAGATACTGCCCTAATTATAGGTCCTTTCTGTTAAAAATGTAAGTGCTTTCCAAGtgagagatgaggccggctggacttcctgggtccagcggggactttggggaactttcctgtcttacaagaggatttgtaaactcaccaatcagtgctctgtaaaacataccaatcagcaggattctaaaagcagccagtcaaagggaggattgaaaaaagggcactctgacaggatagaaacagaacatggaaggggacaataagggaacaaaaactggccaccccagccagcagcagcaacccacttgtgtccccttccacactgtggaaaccgttcttttgctcttcacaataaatcttgctactgttcactctttgggtccttgccatctttaagagctgtaacactcaccatgaaggtctgcagcttcattcttgaaatcagcaagaccacaaacccacttgcaggaacgaaccccagacacaTCTTGGGGGCTCATCCAGGAtatcaccacgtggtgagtaccattggacccctttcacttgctattctgtcctatttttccttagaatttgggggctaaacaccaggcacctgtc--------agccagtcaaaagcaaatggcacagctg-ctggactacagacacaggtgtcagactttttgggaaagggctctctaacaacccccaactcttcggagtcaggagtgttcatttgcctggaaccagcttctgctttccctgcacttctgggctgagctgagggtcaacagagaggaaaactaatcagctccagggtcccaacaaaaacttggttgaccctgcagctatgagcagagctctcaaacttatgttgcccaagcgagactcacccatctgtcctgtctatcctgacacttgtctcctg---ggtcctaatgcctgtcagacaaactttctctcacctctcttctccaaggctagtcctgcttctaaaaatcactccctatccctggtgcttttctagtttctcctataaggatgatttctaatatagattttgggactctgttcccttcttcaggcacccaggcttacaaatcagaaagagccgaattcttcaacaggaaataggtgccctggggcacataatttttgcccagagccctgttgcaggtggaactatctggaattttaggatccctcctcaggctagcaggcctaacaaaggctattcttgaagctaggatatggggagtctcagaaattatagactgcaaaattgggggaatatccttcctattcatatgatgagaagtgaggacaaaaggcatcacttttccaatcctggagatccctttcctccctcaaggtatggccctccactccattttgaggcatatcatctttataggacaaggttaagttcccaataccaacaggagaaaatgcttaggactctaacaggttttcaagaatgcatcagtaagggccactaaatctgacctttcttggccctctttgttgtctaggaggaaaataagtgtttccactgctgctttggtgagcacaactattctgaatagtagggtccagggaccattgcaggttctggggtggg-aaaaaacagatcaaaactgcaggcggttttttgttctgttttagatgggaaacactcaggcatcaacgagctcacccttgaaatgcatcctaagccattgggaccaatttgacccacaaaccctgaaaaagaagcagcttatttttttctgcactatagcctggctccaatattctctccctgatggggaaaaatggccacctgagggaagtataaattataatactatcctgcatcttgaccttttctgtaagagggaaggcaaatgttgtgaaataccttatgtccaagctttctttttattgaaggataatccacaactatgcaaagcttacaatctatatcccacaggaagacctctcagcttatccccatattctagccttcctacagctccccttcctattagtggtgagcctcctctaatctcccccactgagatggaaacaagcaaagaaatatccatgggaccataaa--a-cccc--------caggctattggttatgtccccttcaagctgaaaggggaggggaatttggcccaacccaggtacatgacccc-tcctccctctctgatttaaagcaaatcaaggtagacctggggaagttttcagat-accctgataggtacacatatgtcctacggggtctagggcaaaccttcaacctcacttggagagctgtcatgctattgttagaacaaaccctggcttttaatgaaaagaatgtggctttagctgcagcccaagagtttggagatacatggtatcttagtcaggttaatgatagaatgacagctgaagaaagggacaaattctctactgatcagcaagccatagccagtatggatccccactgggacctccactcaggtcatggggactagggttgcaaatatctgttgacctgtgtcaatgaagaagacttaggaaaaagcccatgaattattcaatgatgtccaccataactcagggaaaggaagaaaatcctaccaccttccttgagtggctacaggaggccttaagacaatataccctcctgtcacttgattccctcaagggtcagttgatcctaaaggataactttattacccaatcagctgcagatatcaggagaaagctcctaaagctagccctgggtcctgaacaaaatttagaggcattattaaacctagaaatctcagtgttctataaaagggaccaagaggagcaggccaaaaaggaaaagtgagataagagaaaggccacagccttagtcatggccctcagacaaacaaaccttgg-tagttcagagaggacaggaaatggagcaggccaatcacctggcagggcttgttatcagcgtgggttgcaaggacactttaaaaaagattgtccagtgagaaacaagccacccccttgcccatgtccactatgccaaggcaatcattggaaggtgcactgccccagaggacaaaggctctctgggccagaagcccccaatcagatgatccaacaacaggactgagggtgcctggggcaagtgccagctcatgtcatcaccctcagtgagacccaggtaagtttaaccactgaaggccaggaaattcacttcctcctggacactagcgtggccttctcagtgttaatctcctgccctggacggctttcttcaaggtccattaccatccaaggaatcctgggacagcctgtaaacaggtagttctcccaccttctcagttgtaattgggagaatttgcccttttcacgtgcctttcttgttatgcctggaagtgccacacccttatta---gggaggaacatattagccattgctattatctacatgaatatgggggacaagttacccatttgttgtcccctacttgaggagggaatcaaccctgaagtctgggcattggaaggacaattcagaagggcaaaaaatgcccacccagttcaaatctagctaaaagaccccatcacttttccttatcaaaggcaatatcccttaaggcctgaagctcgtaaaggattaaaggatactgttagacatttaaaagctcaagtcttagtaagaaaattcagcagtccctgcaacaccccaattctaggaatacaaaaacaaaatggtcggtggagactagtgcaagatcttagactcatcaatgaggcagtaattcctctatatccacctgtagccaacccctatacactgctctctcaaataccagagtcagcagaatggttcactgttctgatcctcaaggatgccttctgtattctcctgcactctgactcccagtttctctttgcctttgaggatcccacagaccacacgtcccaacttacatggacagtcttgcctcaagattttagggatagccctcatctctttggtcaggcactggcccaaaatctaggccacttctcaagcccaggcactctggtccttcagtatgtggatgatttacttttggctaccagtttggaagcctcatgccagcaggctactctagatctcttgaactttgaagctaatcaaaggtacaaggtgtgtaaatcaaaggcccagctctgcctacaacaagtcaaatatctaggtctagtcttagccaga-gaaccagggccctcagcaaagaatgaatacagcctatactgacttgtcctcaccctaagacattaaaacagtcacgggggttccttgggatcaccagtttttgccaactatggatccccagatacagcgagatggccaggccactctatactc-aatcaaggagacccagagggcaaatactcatctagtataatgggaaccagaggcagaaacagctttcaaaaccttaaagcaggccctagtaccagctccagccttaagccttcccacaggacaaaacttctctttatacatcacaaagagagtgggaatagctcttggagtccttactcagactcaagggacaaccccacaaccagtggcatacttaagtaaggaaattgatgtagtagcaaaaggctggcctcattgtttat-ggtagttgtggcagtggtcatgttagtatcagaggctatcaaaataatacaaggaaaggatctcattgtctggacagctcgtgatgtaaatggcatactaggtgccaaaggaagtctatggctatcagacaactgtctgcttagataccaggcactactccctgaggaactggtgcttcaaatatgcatgtgtgtggccctcaaccctgccacttttctcccagaggatggggaaccaatcaagcatgactgccaacaaattgtagcccagacttttgctgttcaagaggatctcttagaggtccccttagctaatcctgaccttgccctatatatcgaaggaagttcatttatggagaatgggatatgaagggcaagttatgccatagttagtgatgtaacagtacttgaaactaagcctcttccccta-gggaccagcacccagttagcagaactagtggtgcttacctgagccttagaactgggaaaggaaaaaagaataaatgtatatacagtatttgtccatttcatctaataaataatctaatttgtttaatggcaaaaaatgtatatacagttagcaagtatgcttatctaattctacatgcttatgctgcaatatggaaagaaagggagttcctaacctctaggggaacccccattaaataccacaaggaaatcatggagttattgcatgcagtgcaaaaacccaaggaggtggcagtcttacactgctaaagccatcaaaaagatgaaggagaaaaggcagaaagaaactgtcgggcagaagctgagaccaaaattgctgccaggtggaacctcccattagaaatacctatggaag s panTro4.chr21 3766037 5670 + 32799110 AAGTCAGGGATGGAGGGCTGGTCTGGGGGTCTGGGAGTCCACCTGGAGTCTCTCTGAGAGTGAGGAAAAACCAAGACCTTACCCAGCAGTTCAAGCATCTTTCAAGTAAGCCTCACTGAAGAGGGTCAGCCCTTCCCTGGGGAATGTCAGGTTTTGAGAATCTCGTGGCATTATGTGCTGAACTGTGGGCAGGAATCCTAGGGCTGTTTTCCTTTTCTCCTTCTCCCAGATCAGAGCATCAGATACTGCCCTAATTATAGGTCCTTTCTGTTAAAAATGTAAGTGCTTTCCAAGtgagagatgaggccggctggacttcctgggtccagcggggac-ttggggaactttcctgtcttacaagaggattgtaaaactcaccaatcagtgctctgtaaaacataccaatcagcaggattctaaaagtagccagtcacagggaggattgaaaaaagggcactctgacaggatagaaacagaacatggaaggggacaataagggaacaaaaactggccaccccagccagcagcagcaacccacttgtgtccccttccacactgtggaaaccgttcttttgctcttcacaataaatcttgctactgttcactctttgggtccttgccatctttaagagctgtaacactcaccatgaaggtctgcagcttcattcttgaaatcagcaagaccacaaacccacttgcaggaatgaactccagacacaTCTTGGGGGCTCATCCAGGAtatcaccacgtggtgagtaccattggacccctttcacttgctattctgtcctatttttccttagaatttgggggctaaacaccaggcacctgtc--------agccagttaaaagcaaatggcacagctg-ctggactacagacacaggtgttagactttttgggaaagggctctctaacaacccccaactcttcggagtcaggagtgttcatttgcctggaaccagcttctgctttccctgcacttctgggctgagctgagggtcaacagagaggaaaactaatcagctccagggtcccaacaaaaagttggttgaccctgcagctatgagcagagctctcaaacttatgttgcccaagcgagacacgcccatctgtcctgtctatcctgacacttgtctcctg---ggtcctaatgcctgtcagacaaactttctctcacctctcttctccaaggctagtcctgcttctaaaaatcactccctatccctggtgcttttctagtttctcctataaggatgatttctaatatagattttgggactctgttcccttcctcaggcacccaggcttacaaatcagaaagagccgaattcttcaacaggaaataggtgccctggggcacataatttttgcccagagccctgttgcaggtggaactatctggaattttaggatccctcctcaggctagcaggcctaacaaaggctattcctgaagctaggatatggggagtctcagaaattatagactgcaaaattgggggaatatccttcctattcatatgatgagaagtgaggacaaaaggcatcacttttccaattctggagatccctttcctccctcaaggtatggccctccactccattttgaggcatatcatctttataggacaagtttaagttcccaataccaacaggagaaaatgcttaggactctaacaggttttcaagaatgcatcagtaagggccactaaatctgacctttcttggtcctctttgttgtctaggaggaaaataagtgtttccactgctgctttggtgagcgcaactattctgaatagtagggtccagggaccattgcaggttcttgggtgggaaaaaaacagatcaaaactgcaggcagttttttgt--tgttttagatgggaaacactcaggcatcaacgagctcacccttgaaatgcatcctaagccattgggaccaatttgacccacaaagcctgaaaaagaagcagcttatttttttctgcactatagcctggctccaatattctctccctgatggggaaaaatggccacctgagggaagtataaattataatactatcctgcagcttgaccttttctgtaagagggaaggcaaatggtgtgaaataccttatatccaagctttctttttattgaaggataatccacaactatgcaaaacttacaatctacatcccacaggaggacctctcagcttatccccatattctagccttcctacagctccccttcctattagtggtgagcctcctctaatctcccccactgagatggaaacaggcaaagaaatatccaagggaccataaa--accccc--------caggctattggttatgtccccttcaagctgaagggggaggggaatttggcccaacccaggtacatgacccc-tcctccctctctgatttaaagcaaatcaaggtagacctggggaagttttcagat-accctgataggtacacagatgtcctacagggtctagggcaaaccttcaacctcacttggagagctgtcatgctattgttagaacaaaccctggcttttaatgaaaagaatgtggctttagctgcggcccaagagtttggagatacctggtatcttagtcgggttaatgatagaatgacagctgaagaaagggacaaattccctgctgatcagcaagccatagccagtatggatccccactgggacctccattcaggtcatggggactagggttgcaaacatctgttgacctgtgtcaatgaggaagaattaggaaaaagcccatgaattattcaatgatgtccaccataactcagggaaaggaagaaaatcctaccaccttccttgagcggctacaggaggccttaagacaatatacccccctgtcattcgattccctcaagggtcagttgatcctaaaggataagtttattacccaatcagctgcagatatcaagagaaaactccaaaagatagccctgggtcctgaacaaaatttagaggcattattaaacctagaaatctcagtgttctataaaagggaccaagaggagcaggccaaaaaggaaaagtgagataagagaaaggccacagccttagtcatggccctcagacaaacaaaccttgg-tagttcagagaggacaggaaatggagcaggccaatcacctggcagggcttgttatcagcgtgggttgcaaggacacttttaaaaagattgtccagtgagaaacaagccacccccttgcctatgtccactatgccaaggcaatcattggaaggtgcactgccccagaggacaaaggctctctgggccagaagcccccaatcagatgatccaagaacaggactgagggtgcctggggcaagtgccagctcatgtcatcaccctcagtgagacccaggtaagtttaaccactgaaggccaggaaattcacttcctcctggacactagcgtggccttctcagtgttaatttcctgccctggatggctttcttcaaggtccattaccatccaaggaatcctgggacagcctgtaaacaggtagttctcccaccttctcagttgtaattggaagaatttgcccttttcacgtgcctttcttgttatgcctggaagtgccacacccttatta---gggagggacatattagccattgctattatctacatgaatatgggggacaagttacccatttgttgtcccctacttgaggagggaatcaaccctgaagtctgggcattggaaggacaattcagaagggcaaaaaatgcccacccagttcaaatctagctaaaagaccccatcacttttccttatcaaaggcaatatcccttaaggcctgaagctcgtaaagcattaaaggatattgttagacatttaaaagctcaagtcttagtaagaaaattcagcagtccctgcaacaccccaattctaggagtacaaaaacaaaatggtcagtggagactagtgcaagatcttagactcatcaatgaggcagtaattcctctatatccagctgtagccaacccctatacactgctctctcaaataccagagtcagcagaatggttcactgttctgaacctcaaggatgccttctgcattctcctgcactctgactcccagtttctctttgcctttgaggatcccacaggccatacgtcccaaattacatggacagtcttgcctcaagattttagggatagccctcgtctctttggtcaggcactggcccacaatctaggccacttctcaagcccaggcactctggtccttcagtatgtggatgatttacttttggctaccagtttggaagcctcatgccagcaggctactctagatctcttgaactttgaagctaatcaaaggtacaaggtgtgtaaatcaaaggcccagctctgcctacaacaagtcaaatatctaggcctagtcttagccaga-gaaccagggccctcagcaaagaatgaatacagcctatactgacttttcctcaccctaagacattaaaacagtcatgggggttccttgggatcaccagtttttgccaactatggatccccagatacagcgagatggccaggccactctatactc-aatcaaggagacccagagggcaaatactcatctagtataatgggaaccagaggcagaaacagccttcaaaaccttaaagcaggccctagtaccagctccagccttaagccttcccacaggacaaaacttctctttatgcatcacaaagagagtgggaatagctcttggagtccttactcagactcaagggacaaccccacaaccagtggcatacttaagtaaggaaactgatgtagcagcaaaaggctggcctcattgtttat-ggtagttgtggcagtggtcatgttagtatcagaggctatcaaaataatacaaggaaaggatctcattgtctggacagctcgtgatgtaaatggcatactaggtgccaaaggaagtctatggctatcagacaactgtctgcttagataccaggcactactccctgaggaacaggtgcttcaaatatgcatgtgtgtggccctcaaccctgccacttttctcccagaggatggggaaccaatcaagcatgactgccaacaaattgtagcccagacttttgctgttcaagaggatctcttagaggtccccttagctaatcctgaccttaccctatatatcgaaggaagttcatttatggagaatgggatatgaagggcaagttatgccatagttagtgatgtaacagtacttgaaactaagcctcttccccta-gggaccagcatccagttagcagaactagtggtgcttacctgagccttagaactgggaaaggaaaaaagaataaatgtatatacagtatttgtccatttcatctaataaataatctaatttgtttaatggcaaaaaacgtatatacagttagcaagtatgcttatctaattctacatgtttatgctgcaatatggaaagaaagggagttcctaacctctgggggaacccccattaaataccacaaggaaatcatggagctattgcatgcagtgcaaaaacccaaggaggtggcagtctgacactgctaaagccatcaaaaaggtgaaggagaaaaggcagaacgaaactgtcgggcagaagctgagaccaaaattgctgccaggtggaacctcccattagaaatacctatggaag i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4522165 5671 + 32716333 AACTCAGGGGTGGAGGGCTGGTTTGGGGGTCTGGGAGTCCACCTGGAGTCTCTCTGAGAGTGAGGAAAAACCAAGACCTTAACCTGCAGTTCAAGCATCTTTCAAGTAAGCCTCACTGAAGAGGGTCAGCCCTTCCCTGGGGAATGTCAGGTTTTGAAAATCTCATGGCATTCTGTGCTGAACTGTGGGCAGGAATACTAGGGCTGTTTTCCTTTTCTCCTTCTGCCAGATCAGAGCATCAGATACTGCCCTAATTATAGGTCCTTTCTATTAAAAATGTAAGTGCTTTCCAAGtgagagatgaggccagctggacttcctgggtacagtggggac-ttggggaactttcctgtcttacaagaggattgtaaaactcaccaatcagtgctctgtaaaacacaccaatcagcagtattctaaaagtagccaatcacagggaggattgaaaaaagggcactctgataggacagaaacagaacatggaaggggacaataagggaataaaaactggccatgccagccagcagcagcaacccacttgggtccccttccacactgtggaaactgttcttttgctcttcacaataaatcttgctactgctcactcttcgggtccttgccatctttaagagctgtaacactcacaatgaaggtctgcggcttcattcttgaagtcagcaagaccacaaaccctctggcaggaaccaactccagacacaTCTTAGGGGCTCATCCAGGAtatcaccatgtggtgagtaccatcagacccctttcacttgctattctgtcctatttttccttagaatttgagggctaaacactgggcacctgtc--------agccagttaaaagcaactggcgcagctg-ccggactaaagacacaggtgtcaggcttttagggaaagggctctctaacaaccctggactctttggagtcaggagtgttggtttgcctgaaaccagcttttgctttccctgcacttctgggctgagccaaggatcaacagagaggaaaactaatcagctccagggtcccaacaaaaagttggttggccctgcacctatgagcagagctctcaagcttacgttgcccaagcgagactcacccatctgtcctatctctcctgacacttctctcctg---ggtcctaatgcctgtcagacaaactttctctcacctctcttctccaaggctagtcctgcttctaaaaatcactccctatccctgatgcttttctagtttctcctataagaatgatttctaatacagattttgggactctgttcccttcttcaggcacccaggcttacaaatcagaaagagccaaattcttcaaagggaaataggcaccctggggcacataatttttgcccagagccctgttgcagggggaactatctggaattttaggatccctcctcaggctagcaggcctaacaaaggctattcctaaagctaggatttggggagactc-gaaattatagactccaaaattggggagatatccttcctagtcatatgatgagaagtgaggacaaaagacatcacttttccaatcctggagatccctttcctccctcaaggtatggccctccactccattttgaggcatatcatctttataggacaaggttaaggtcccaataccaacaggagaaaatgcttaggactctaacaggttttcaagaatgcatcagtaagggccactaaatccaacctttcttggtcctctttgttgtctaggaggaaaataagtgtttccactgctgctttggtgagcgcaactattctgaatagtagagtccagggaccattgcaggttcttgggtggg-aaaaaacagaccaaaactacaggtggttttttgttctgttttagatgggaaacactcaggcatcaacaagctcacccttgaaatgcatcctaagccattgggaccaatttgacccataaaccctgaaaaagaagcagcttatttttttcttcactatagcctggctccaatattctctccctgatggggaaaaatggccacctgagggaagtataaattataatactatcatgcagcttgaccttttctgtaagagggaaggcaaatggtgtgaaataccttatgtccaagcttactttttattgaaatataatccacaactatgcaaagcttacaatctacatcccacaggaggacctctcagcttatccccatattctagcctccctacagctccccttcctattaatggtgagcctcctctaatctcccccactgagaaggaaacaagcaaagaaatatccaagggaccataaa--accccc--------caggctattggttatgtccccttcaagctgtagggggaggggaatttggcccaatccaggtacaagaccccttcctccctccctgatttaaagcaaatcaaggtagacctagggaagttttcagat-accctgataggtacacagatgtcctttggggtctagggcaaaccttcaacctcacttggagagctgtcatgctattgttagaacaaa--ctggcttttagtgaaaagaatgtggctttagctgcagcccaagagtttggagatacctggtatcttagtcaagtaaatgacagaatgacagctgaagaaagggacaaatttcctactgatcagcaagccattgccagtatggatccccactgggacctccactcaggtcatggggactagggtagcaaacatctgttgacctgtgtcaatgaagaagaatcaggaaaaagcccatgaattattcaatgatgtccaccataactcagggaaaggaagaaaatcctaccaccttccttgagcggctacaggaggccttaagaaaatatagccccctgtcattcaattccctcgagggtcagtcgatcctaaaagataagtttattacccaatcagctgcagatatcaggagaaagctccaaaggctagccctaggtcctgaacaaaatttagaggcattattaaacctggcaatctcggtgttgtgtaaaagggaccaagaggagcaggccaaaaaggaaaagtgagataagagaaaggccacagccttagttatggccctcagacaaacaaaccttgg-tagttcagagaggacagaaaatggagcaggccaatcacccggtagggcttgttatcagtgtgggttgcaaggacactttaaaaaagattgtccaatgagaaacaagccacccccttgcccatgtccactatgccaaggcaatcattggaaggtgcactgccccagacgacaaaggctgtctgggccagaagcccccaatcagatgatccaacaaaaggactgagggtgcctggggcaagtgccagctcatgtcatcaccctcactgagacccaggtaagtttaaccattgaaggccaggaaattcacttcctcctggacactagcacagccttctcagtgttaatctcctgctctggacagctgtcttcaaggtccattaccatccgaggaatcctagaacagcctataaacaggtagttctcccaccttctcagttgtaattggaagactttgcccttttcacatgcctttcttgttatgcctggaagtgccacacccttatta---gggagggacatattagccaatgttattatctacatgaatatgggggacaagttacccatttgttgtcccctacttgaggagggaatcaaccctgaagtctgggcattggaaggacaattcagaatggcaaaaaatgcccacccagttcaaatcaagctaaaagaccccatcacttttccttatcaaaggcaatatcccttaaggcctgaagctcataaaggattaaaggatattgttagacatttaaaagctcaagccttagtaagaaaattcagcagtccctgtaacaccccaattctaggagtacaaaaacaaaatggtcagtggaaactagtgcgagatcttagactcatcaatgaggcagtaattcttctatatccagctgtagccaacccctataccctgctctctcaaataccagagtcagcagaatggctcactgttccggacctcaaggatgccatctgcattcccctgcactctgacttccagtttctctttgcctttgaggatcgcacagaccacacgtcccaccttacatggacggtcttgcctcaagggtttagggatagccctcatctgtttggtcaggcactggcccaaaatctaggccacttctcaagcccaggcactctggtccttcagtacgtggatgatttacttttggctaccagtttggaagcctcatgccagcaggctactctagatctcttgaactttcaagctaatcaagggtacaagatgtgtaaatcaaaggcccagttctgcctacaacaagtcaaatatctaggcctagtcttagccagaggaaccagggccctcagcaaagaaacaatacagcctatactggcttgtcctcaccctaagacattaaaacagtcacaggggttccttgggatcaccagtttttgccaactatggatcccctgatacagcgagatgg-gaggccactctatactctaatcaaggagacctagagggcaaatactcatctagtagaatgggaaccagaggcagaaacagacttcaaaaccttaaagcaggtcctagtaccagctccagccttaagccttcccacaggacaaaacttctctttatacatcacaaagagagtgagaatagctcttggagtccttacttagactcatggggcaaccccacaaccagtggcatacttaagtaaggaaattgatgtagtagcaaaagactggcctcattgtttatgggtagttgtggcagtggtcatgttagtatcagaggctatcaaaataatacaaggaaaggctctcactgtctggactgctcatgatgtaaatggcatactaggtgccaaaggaagtttatggctatcagacaaccgtctgcatagataccaggcactactccttgaggaactggtgcttcaaatatgcacgtgtgtggccctcaaccctgccacttttctcccagaggatggggaaccaatcgagcatgacagccaacaaattgtagcccagacttatgccattcaagaggatctcttagaggtccccttagctaatcctgaccttaatctatataccgatggaagttcatttatggagaatgggatatgaagggcaagttatgccgtagttagtgaagtaacagtacttgaaactaagcctcttccccta-gggaccaacacccagttcgcagaactagtggtgcttatccaagtcttagaactgggaaaggaaaaaagaacaaatgtatatacagtatttgtccatttcatctaataaataatctaaattgtttaatggaaaataatgtatatacagataacaaatatgcttatctaattctacatgcccatgctgcaatatggaaagaaagggagttcctaacctctgggggaaaccccattaaataccacaaggaaatcatggagttatcgcatgcagtgcaaaaacccaaggaggtggcagtcttacactgctaaagccatcaaaaaggtgaaggaaaaaagccagaaggaaactgtcaggcagaatctgaggccaaaattgctgccaggcaggaactcccattagaaatatctatggaag i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168634810 5612 - 198365852 AAGTCAGGG-TGGAGGGCTGGTCTGGGGGTCTGGGAGTCCACCTGGAGTCTCTCTGAGAGTGGGGAAAAACGAAGACCTTACGCTGCATTTCAAGCATCTTTCAAGTAAGTCTCACTGAAGAGGGTCATCCCTTCCCTGGGGAATGTCAGGTTTTGAAAATCTCATAGCATCCTGTGCTGAACTGTGGGCAGGAATCCTAGAGCTGTTTTCCTTTTCTCCTTCTCCCAGATCAGAGCATCAGATACTGCCCTAATTATAGGTCCTTTCTATTAAAAATGTAAGTGCTTTCCAAGtgagaggtgaggccagctggacttcctgggtcgagtggggac-ttggggaactttcttgtcttacaaggggattgtaaaactcaccaatcagcgctctgtaaaacacaccaatcagcaggattctaaaagtagccaatcacaggaaggattgaaaaaagggcactctgataggatagaaacagaacatggaagaggacaataagggaataaaaactggccaccccagccagcagcagcaacccacttgggtcccctaccaccctgtggaaactgttcttttactcttcacaataaatcttgctactgctcattctttggctccctgccatctttaagagctgtaacactcaccgtgaaggtctgcggcttcattcttgaagtcagcaagaccatgaacccactggcaagaaccaa--ccagacacGTCTTAGGGGCTTATCTGGGAtatcaccacagggtgagtaccatcggacttctttcgcttgctattctgtcctattcttccttagaattcaggggctaaacaccgggcacctgtc--------agtcagttaaaagcaactagcacagctg-ccaga--aaagacatgggtgtcaggctttttgggaaagggctctctaacaacccccaactctttcgagtcaggagtgttggtttgcctggaaccagcttctgctttccctgcatttctgggctaagccaagggtcaacaaagagaaaaactaatcagctctgaggtcccaacaaaaagttgattgaccctgcagctattagcagagctctcaaagttatgttgcccaagcgagactcgcccatctgccctatctatcctgatccttgtctcctg---ggtcctaatgcctgtcagacaaactttctctcacctctcttctccgaggctagtcctgcttctaaaaatcactccttgtccctggtgctctactaatttctcctataagaatgatttctaatacagattttgggactctgttcccttcttcaggcacccaggttcacaaatcagaaagagccaaattcttcaatgggaaataggtgccctggggcacataatttttgcccagagccctgctgctgggggtactatctggaattttaggatccctcctcagactagcaggcctaacaaaggctattcctgaagctaggatatgcggagactcagaaattatagactccaaaattggggagatatccttcctattcgtatgataagaagtgaggacaaaagatgtcacttatccagtcctggagatcgcttccctccctcaaggtatggccctccactccatgttgaggcatatcatctttataggacaaggttagggtcccaataccaacaggagaaaatgcttaggactctaacaggttttcgagaatgcatcagtaagggccactaaatcagacctttctcagtcctctttgtggtctaggaggaaaataagtgtttctgctgctgcttcggtgagtgcaactattccgaatagtagggtccagggaccattgcaggttcttgagtggg-aaaaaacagaccaaaaccacgggcggttttcc-ttctgttttagatgggata----taggcatcaataagctcacccttgaaatgcaccctaagccattgggaccaatttgacccgcaaaccctgaaaaagaagcagcttatttttttctgcactatggcctggctccaatattctctccctgatggggaaaaatggccacctgagggaagtataaattataatactatcctgcagcttgaccttttcagtaagagggaaggcaaatggtgtgaaataccttatgtccaagttttctttttattgaaggataatccacaactatgcaaagcttacaatctacattccacaggaggaactctcagcttacctccatattctagcctccctacagctccccttcctattaatgatgagcctcctctaatctcccacacccagaagcaaacaagcaaataaatctccaagggaccat-aaccaccccc--cccccgcaggttatcgattatgtccccttcaagctgtagggggaggggaatttggcccaacctaggcacatggcccc-ttctccctctctgatttaaagcagatcaagatagacctggggaagttttcagatgatgctgatagttatatagatgtcttacagggtctagggcaaatcttcaacctcactagaagtgatgtcatgctattgttagaacaaaccctggcttttaatgaaaagaatgtggctttagctgcagcccaagagtttggagacacctggtatcttagtcaagtaaatgatagaatgacagctgaagaaagggacaaattcctaactgagcagcaagccatctccagtatggatccccactgggacttccactcaagtcatggggactagagtcgcaaacatctgttgacctgtgtcaacaaagaagaattaggaaaaatcccatgaattattcagtgatgtccaacataactcagggaaaggaagaaaatcctatcaccttccttgagtggctatgggaggcctgaagaaaatatactcccctttcacttgattccctcgagggtcagttgattctaaaagaaaaatgtattacccaatcagctgaagatatcaggagaaagctccaaaagctagccctgggtcctgaacaaaatttggaggcattattaaacctggcaacctcggtgttctataatagggaccaagaggaagagaccaaaaaggaaaagtgaggtaagagaaaggccacagccttagtcatggcccccagacaaacaaaccttgg-tggttcagagaggacagaaaatggaacaggctaatcacccggtaggtcttgttatcagtgtgggttgcaaggatgctttaaaaaagattgtccagtgagaaacaagccacccccttgcccatgtctactatgccaaggcaatcattggaaggtgcactgccccagaggacaaaggctttctgggccagaaaccccccaccagatgatccaacaacaggattgagggagcccaggacaagtgccagctcatgtcatcaccctcactgagccccaggtaagtttaaccattgagggccaggaaattcacttcctcctggacactgacaccaccttctcagtgttaatctcctgccccgaacagctgtcttcaaggtccattaccatccgaggaatcctgagacagcctgtaaacaggtatttctcccacctcctcagttgtaattgggagactttgccctttttacatgcctttcttgttatgcctggaagtgccacacccttattgggtgggggggacatattagccaaagctattatctacatgaatatgggggataagttacccatttgttgtcccctacttgaggagggagtcaaccctgaagtctgggcattggaagga-aattcagaagggcaaaaaatgcctgcccagttcaaatcaagctaaaagaccccatcacttttccttatcaaaggcaatatcccttaaggcctaaagttcataaaggattaaaagatatcattagacatttaaaagctcaagccttagtaagaaaattcagcagtccctgcaacaccccaattctagaagtacaaaagcaaaatggtcagtagagactagtgcaagatcttagactcatcaatgaggcagtaattcctctatatccagctatagccacccgctataccctgctctctcaaataccagaggaagcagaatggtttactgttctggacctgaaggatgccttctgcattctcctgcactctgactcccagtttctctttgcctttgaggatcccacagacctcacatcccaacttacatggacagtctcgcctcaaggttttagggatggccctcatctgtatggtcaggcactggcccaaaatctaggccacttctcaagttcaggcactctggtccttcagtatgtggatgatttacttttggctaccaagttggaagcctcatgccagcaggctactctagatctcttgaactttctagctaatcaagggtacaaggtatgtaaatcaaaggcccagctctgcctacagcaagtcaaatatctagacctagtcttagccagaggaaccagggccctcagcaaagaatgaatacatcctatactggcttgttctcaccctaagacattaaaacagttgcaggagttccttgggatcaccagcctttgccaactatggatccccagatacagcgagatgaccaggccactctatactctaatcaaggaaacccagagggcaaatactcatctagtagaatgggaaccagaggcataaacagctttcaaaaccttaaagcaggccctagtttcagctccagccttaagccttcccacaggacaaaaattctctttatatatcacagagagagcaagaatagctcttggagtcctcactcagactcatggaacaacctcacaaccagcggcatatccaagtaaggaaattgatgtagtagcaaaaggctggcctcattgtttatgggtagttgcagcagtggccacgttagtatcagaggctatcaaaataatacaaggaaaggatctcactgtctgcactactcatgatgtaaatggcatattaggtgccaaatgaagtttatggctatcagacaaccacctgctcagataccagacactactccttgagggaccggtgctaaaaatatgcacgtgtgtagccctcaactctgccacttttctcccagaggatggggaaccaattgagcatgtcagccaaaaaattgtagtccagacttacgccacccaagaggatctcttagaggttcccttagctaatcctgaccttaacctatataccgatagaagttcatttatggagaatgggatatgaagagcaagttatgccatagttagtgatgtaacagtacttgaaactaagccttttcccccc-gggaccagtgcccagttagtagaactagtggtgcttacccgagcctaagaactgggaaaggaaaaaagaata--------------------------------------------------------------aacgtatacacagatagcaagtatgcttatctaattctacatgcctatgctgcaatatggaaagaaagggagttcctaacctctgggggaacacccatcatataccacaaggaaaccatggagttattgcacgccgtgcaaaaacccaaggaggtggcagtcttacactgctgaggccatcaaaaaagtgaaggaaaaaaggcagaaggaaactatcaggcagaagctgaggccaaaattgctgccaggtggaacctcccattagaaatacctatggaac i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162299302 5615 - 192294377 AAGTCAGGG-TGGAGGGCTGGTCTGGGGGTCTGGGAGTCCACCTGGAGTCTCTCTGAGAGTGGGGAAAAACGAAGACCTTACGCTGCATTTCAAGCATCTTTCAAGTAAGTCTCACTGAAGAGGGTCAGCCCTTCCCTGGGGAATGTCAGGTTTTGAAAATCTCATAGCATCCTGTGCTGAACTGTGGGCAGGAATCCTAGAGCTGTTTTCCTTTTCTCCTTCTCCCAGATCAGAGCATCAGATACTGCCCTAATTATAGGTCCTTTCTATTAAAAATGTAAGTGCTTTCCAAGtgagaggtgaggccagctggacttcctgggtcgagtggggac-ttggggaactttcttgtcttacaaggggattgtaaaactcaccaatcagcgctctgtaaaacacaccaatcagcaggattctaaaagtagccaatcacaggaaggattgaaaaaagggcactctgataggatagaaacagaacatggaagaggacaataagggaataaaaactggccaccccagccagcagcagcaacccacttgggtcccctaccaccctgtggaaactgttcttttactcttcacaataaatcttgctactgctcattctttggctccctgccatctttaagagctgtaacactcaccgtgaaggtctgcggcttcattcttgaagtcagcaagaccatgaacccactggcaagaaccaa--ccagacacgtcTTAGGGGCTTATCTGGGATatcaccacagggtgagtaccatcggacttctttcgcttgctattctgtcctattcttccttagaattcaggggctaaacaccgggcacctgtc--------agtcagttaaaagcaactagcacagctg-ccaga--aaagacatgggtgtcaggctttttgggaaagggctctctaacaacccccaactctttggagtcaggagtgttggtttgcctggaaccagcttctgctttccctgcatttctgggctaagccaagggtcaacaaagagaaaaactaatcagctctgaggtcccaacaaaaagttgattgaccctgcagctattagcagagctctcaaagttatgttgcccaagcgagactcgcccatctgtcctatctatcctgatccttgtctcctg---ggtccTAATGCCTGTCAGACAAACTTTCTCTCACCTCTCTTCTCCGAGGCTAGTCCTGCTTCTAAAAATCACTCCTTGTCCCTGGTGCTCTACTAATTTCTCCTATAAGAATGATTTCTAATACAGATTTTGGGACTCTGTTCCCTTCTTCAGGCACCCAGGTTCACAAATCAGAAAGAGACAAATTCTTCAATGGGAAATAGGTGCCCTGGGGCACATAATTTTTGCCCAGAGCCCTGCTGCTGGGGGTACTATCTGGAATTTTAGGATCCCTCCTCAGACTAGCAGGCCTAACAAAGGCTATTCCTGAAGCTAGGATATGCGGAGACTCAGAAATTATAGACTCCAAAATTGGGGAGATATCCTTCCTATTCGTATGATAAGAAGTGAGGACAAAAGATGTCACTTATCCAGTCCTGGAGATCGCTTCCCTCCCTCAAGGTATGGCCCTCCACTCCATGTTGAGGCATATCATCTTTATAGGACAAGGTTAGGGTCCCAATACCAACAGGAGAGAATGCTTAGGACTCTAACAGGTTTTCGAGAATGCATCAGTAAGGGCCACTAAATCAGACCTTTCTCAGTCCTCTTTGTGGTCTAGGAGGAAAATAAGTGTTTCTGCTGCTGCTTCGGTGAGTGCAACTATTCCGAATAGTAGGGTCCAGGGACCATTGCAGGTTCTTGAGTGGG-AAAAAACAGACCAAAACCACGGGCGGTTTTCc-ttctgttttagatgggata----taggcatcaataagctcacccttgaaatgcaccctaagccattgggaccaatttgacccgcaaaccctgaaaaagaagcagcttatttttttctgcactatggcctggctccaatattctctccttgatggggaaaaatggccacctgagggaagtataaattataatactatcctgcagcttgaccttttcagtaagagggaaggcaaatggtgtgaaataccttatgtccaagttttctttttattgaaggataatccacaactatgcaaagcttacaatctacattccacaggaggaactctcagcttacctccatattctagcctccctaaagctccccttcctattaatgatgagcctcctctaatctcccacacccagaaggaaacaagcaaataaatctccaagggaccataaaccaccccc--cccccgcaggttatcgattatgtccccttcaagctgtagggggaggggaatttggcccaacctaggtacatggcccc-ttctccctctctgatttaaagcagatcaagatagacctggggaagttttcagatgatgctgatagttatatagatgtcttacagggtctagggcaaatcttcaacctcactaggagtgatgtcatgctattgttagaacaaaccctggcttttaatgaaaagaatgtggctttagctgcagcccaagagtatggagatacctggtatcttagtcaagtaaatgatagaatgacagctgaagaaagggacaaattcctaactgagcagcaagccatctccagtatggatccccactgggacttccactcaggtcatggggactagagtcgcaaacatctgttgacctgtgtcaacaaagaagaattaggaaaaatcccatgaattattcagtgatgtccaacataactcagggaaaggaagaaaatcctatcaccttccttgagtggctatgggaggcctgaagaaaatatacccccctttcacttgattccctcgagggtcagttgattctaaaagaaaaatgtattacccaatcagctgaagatatcaggagaaagctccaaaagctagccctgggtcctgaacaaaatttagaggcattattaaacctggtaacctcggtgttctataatagggaccaagaggaagagaccaaaaaggaaaagtgaggtaagagaaaggccacagccttagtcatggcccccagacaaacaaaccttggttggttcagagaggacagaaaatggaacaggctaatcacccggtaggtcttgttatcagtgtgggttgcaaggatgctttaaaaaagattgtccagtgagaaacaagccacccccttgcccatgtctactatgccaaggcaatcattggaaggtgcactgccccagaggacaaaggctttctgggccagaaacccccaaccagatgatccaacaacaggactgagggagcccaggacaagtgccagctcatgtcatcaccctcactgagccccaggtaagtttaaccattgagggccaggaaattcacttcctcctggacactgacaccaccttctcagtgttaatctcctgccccaaacagctgtcttcaaggtccattaccatccgaggaatcctgagacagcctgtaaacaggtatttctcccacctcctcagttgtaattgggagactttgccctttttacatgcctttcttgttatgcctggaagtgccacacccttattcggtgggggggacatattagccaaagctattgtctacatgaatatgggggataagttacccatttgttgtcccctacttgaggagggagtcaaccctgaagtctgggcattggaagga-aattcagaagggcaaaaaatgcctgcccagttcaaatcaagctaaaagaccccatcacttttccttatcaaaggcaatatcccttaaggcctaaagttcataaaggattaaaagatatcattagacatttaaaagctcaagccttagtaagaaaattcagcagtccctgcaacaccccaattctagaagtacaaaagcaaaatggtcagtagagactagtgcaagatcttagactcatcaatgaggcagtaattcctctatatccagctatagccaaccgctataccctgctctctcaaataccagaggaagcagaatggtttactgttctggacctgaaggatgcctcctgcattctcctgcactctgactcccagtttctctttgcctttgaggatcccacagacctcacatcccaacttacatggacagtctcgcctcaaggttttagggatggccctcatctgtatggtcaggcactggcccaaaatctaggccacttctcaagttcaggcactctggtccttcagtatgtggatgatttacttttggctaccaatttggaagcctcatgccagcaggctactctagatctcttgaactttctagctaatcaagggtacaaggtatgtaaatcaaaggcccagctctgcctacagcaagtcaaatatctagacctagtcttagccagaggaaccagggccctcagcaaagaatgaatacagcctatactggcttgttctcaccctaagacattaaaacagttgcaggagttccttgggatcaccagcctttgccaactatggatccccagatacagcgagatgaccaggccactctatactctaatcaaggaaacccagagggcaaatacttatctagtagaatgggaaccagaggcataaacagctttcaaaaccttaaagcaggccctagtttcagctccagccttaagccttcccacaggacaaaaattctctttatatatcacagagagagcaagaatagctcttggagtcctcactcagactcatggaacaacctcacaaccagcggcatatccaagtaaggaaattgatgtagtagcaaaaggctggcctcattgtttatgggtagttgcagcagtggccatgttagtatcagaggctatcaaaataatacaaggaaaggatctcactgtctgcactactcatgatgtaaatggcatattaggtgccaaatgaagtttatggctatcagacaaccacctgctcagataccagacactactccttgagggaccggtgctaaaaatatgcacgtgtgtagccctcaactctgccacttttctcccagaggatggggaaccaattgagcatgtcagccaaaaaattgtagtccagacttacgccacccaagaggatctcttagaggtccccttagctaatcctgaccttaacctatataccgatagaagttcatttatggagaatgggatatgaagggcaagttatgccatagttagtgatgtaacagtacttgaaactaagccttttcccccctgggaccagtgcccagttagtagaactagtggtgcttacccgagcctaagaactgggaaaggaaaaaagaata--------------------------------------------------------------aacgtatacacagatagcaagtatgcttatctaattctacatgcctatgctgcaatatggaaagaaagggagttcctaacctctgggggaacacccattaaataccacaaggaaaccatggagttattgcacgccgtgcaaaaacccaaggaggtggcagtcttacactgctgaggccatcaaaaaagtgaaggaaaaaaggcagaaggaaactatcaggcagaagctgaggccaaaattgctgccaggtggaacctcccattagaaatacctatggaac i macFas5.chr3 C 0 C 0 s papAnu2.chr3 150993973 5530 - 180432695 AAGTCAGGG-TGGAGGGCTGGTCTGGGGGTCTGGGAGTCCACCTGGAGTCTCTCTGAGAGTGGGGAAAAACGAAGACCTTACCCTGCATTTCAAGCATCTTTCAAGTAAGTCTCACTGAAGAGGGTCAGCCCTTCCCTGGGGAATGTCAGGTTTTGAAAATCTCATAGCATCCTGTGCTGAACTGTGGGCAGGAATCCTagagctgttttccttttctccttctcccagATCAGAGCATCAGATACTGCCCTAATTATAGGtcctttctattaaaaatgtaagtgCTTTCCAAGTGAGAGGTgaggccagctggacttcctgggtcgagtggggac-ttggggaaatTTCTTGTCTTACAAGGGGATTGTAAAACTCAcaaatcagcgctctgtaaaacacaccaatcagcaggattctaaaagtagccaatcacaggaaggattgaaaaaagggcactctgataggaTAGAAACAGAACATGGAAGGGgacaataagggaataaaaactggccaccccagccagcagcatcAACCCACTTGGGTCCCCTATCACCCTGCGGAAACTGTTCTTttactcttcacaataaatcttgctactGCTCATTCTTTGGCTCcctgccatctttaagagctgtaacactcaccgtgaaggtctgcggcttcattcttgaagtcagcaagaccatgaacccactggcaAGAACCAA--CCAGACATATCTTGGGGGCTCATCTGGGATATCACCACACAGTGAGTACCATTGGACCTCTttcgcttgctattctgtcctatt-ttccttagaattcaggGGCTAAACACTGGGCACCTGTCATCTTTATAGTCAGTTAAAAGCAACTAGCACAGCTGACCAGA--AAAGACATGGGTGTCAGGCTttttgggaaagggctctctaacaacccccaaCTCTTTGGAGTCAGGAGTGTTGG-------------------------CCCTGCATTTCTGGGCTAAGCCAAGggtcaacaaagagaaaaactagaCAGCTCTGGGGTCCCAACAAAAAGTTGATTGACCCTGCAGCTATTAGCAGAGCTCTCAAAGTTATGTTGCCCAAGCGAGACTCGCCCATCTgtcctatctatcctgacccttgtCTCCTGTCAGGTTGT----CCTGTCAGACAAACTT----CCACCTCTCTTCTCCAAGGCTAGTCCTGCTTCTAAAAATCACTCCCTGTCCCTGGTGCTCtactagtttctcctataagaatgatttctaataCAGATTTTGAGACTCTGTTCCCTTCTTCAGGCACCCGGGTTCACAAATCAGAAAGAGCCAAATTCTTCTATGGGAAATAGGTGCCCAGGGGCACATAATTTTTGCCCAGAGCCCTGCTGCTGGGGgtactatctggaattttaggatccctcctcagactagCAGGTCTAACAAaggctattcctgaagctaggatatggggagaCTCAGAAATTATAGACTCAAAAATTGGGGAGATATATTTCCTATTCATATGATGAGAAGTGAGGACAAAAGACGTCACTTATCCAGccctggagatcccttccctccctcaagGTATGGCCCTCCACTCCATGTTGAGGCATATCATCTTTATAGGACAAGGTTAGGGTCCTAATACCAACAGGAGaaaatgcttaggactctaacaggttttcgagaatgcatcagtaagggccactaaatcagACCTTTCTcagtcctctttgtggtctaggaggaaaataagtgtttctgctgctgcttcgGTGAGTGCAACTAATCCGAATAGTagggtccagggaccattgcAGGTTCTTGAGTGGG-AAAAAACAGACTAAAACCACGGGtggttttcc-ttctgttttaggtgggaaacactcaggcatcaataagctcacccttgaaatgcatcctaagccattgggaccaatttgacccacaaaccctgaaaaagaagcagcttatttttttctgcactatggccTGGCTCCAATATTCTCTccctgatggggaaaaatggccacctgagggaagtataaattataataatatcttgcagcttgaccttttcggtaagagggaaggcaaatggtgtgaaataccttatgtccaagctttctttttattgaaggataatccacaactatgcaaagcttacAATCTACATTCCACAAGAGGAActctcagcttacccccatatTCTAGCCTCCCTacagctccccttcctattaatgatgagcctcctctaatctcccccacccagaaggaaacaagcaaataaatcTCCAAGGGACCATAAA--ACCCCC--------CAGGCTAtcggttatgtccccttcaagctgtagggggaggggaatttggcccaatcCAGGTACATggcccc-ttctccctctctgatttaaagcagatcaagatagacctggggaagttttcagatgatcctgataggtacatagatgtcctacagggtcttgGGCAAACCTTCAACCTCACTAGGAGTGATGTCATGCTACTGTTAGAACAAACCCTggcttttaatgaaaagaatgtggctttagctgcagcccaagagtttggagatacctggtatcttagtcaagtaaatgatagaatgacagctgaagaaagggacaaattccttACTGATCTGCAAGCCATctccagtatggatccccactgggacttCCACTCAGGTCATGGGGACTAGGGTGGCAAACATCTGTTGATTTGTGTCAACAaagaagaattaggaaaaagcccatgaattattcaatgatgtccaacataactcagggaaaggaagaaaatcctatcACCTTCCTTGAGTGGCTATGGGAGG------------------CCCTTTCACTCAATTCCCTCGAGGGTCAGTTGATcgtaaaagaaaaatgtattaccCAATCAGCTGaggatatcaggagaaagctccaaaagctaGCCCCAGGTCCTGAACAAAATTtagaggcattattaaacctggcaacctcggtgttctataatagggaccaagaggaacagaccaaaaaggaaaagtgagataagagaaaggccacagccttagtcatggcccctagacaaacaaaccttgg-tggttcagagaggacagaaaatggaacaGGCCAATCACCCGGTAGGATTTGTTATCAGTGTGGGTTGCAAGGATGctttaaaaaagattttccaGTGAGAAACAAGCCACCCCCTTGCCCATGTCCACTATGCCAAGGCAATCATTGGAAggtgcactgccccagaggacaaaggCTTTCTGGGCCGGAAACctccaaccagatgatccaaaaACAGGACTGAGGGAGCCCAGGGCAagtgccagctcatgtcatcaccctcactgagccccagGTAAGTTTAACCATTGAAGGCCAGGAAATtcacttcctcctggacactgacactgccttctcagtgttaatctcttGCCCTGAACAGCTGTCTTCAAGGTCCATTACCATCCGAGGAATCCTGAGACAGCCTGTAaacaggtatttctcccacctcctcagttgtaattgggagactttgccCTTTttacatgcctttcttgttatgcctggaAGTGCCACACCCTTATTA---GGGGGGTACATATTAGCCAaagctattatctacatgaatatgggggataagttacccatttgttgtcccctacttgaggagggaGTCAACCCTGAAGTCggggcattggaaggacaattcAGAAGGGCAAAAAATGCCTGCTCAGTTCAAATCAAGCTAAAAGACCCCAtaacttttccttatcaaaggcaatatcccttaaggcctAAAGTTCATAAAGGATTAAAAGAtattgttagacatttaaaagctcaaggcttagtaagAAAATTcagcagtccctgcaacaccccaattctaggagtacaaaacCAAAATGatcagtggagactagtgcaagatcttagactcatcagtgaggcagtaattcctctatatccagcTATAGCCAACCGCTATaccctgctctctcaaataccagaggaagcagaatggtttACTGTTCTGGACCTGAAGGATGCCTTCTGCATTCtcctgcactctgactcccagtttctctttgcctttgaggatcccacagacctCACGTCCCAACTTACATGGACAGTCTCACCTCAAGGTTTTAGGGATAGCCGTCATCTGTAtggtcaggcactggcccaaaatctaggccacttctcaagttcaggcactctggtccttcagtatgtggatgatttacttttggctaccaatttggaagcctcatgccagcaggctactctagatctcttgaactttctagctaatcaagggtacaaggTATGTAAATCAAAGGCCCAGCTCTGCCTACAGCAAGTCAAATATCTACACCTAGTCTTAGCCAGAGGAACCAGGGCCCTCAGCAAAGAATGaatacagcctatactggcttgttctcaccctaagacattaaaacagttgcaGGAGTTCCTTGGGATCACCAGCCTTTGCCAACTATGGATCTCCAGATACAGCGAGATGACCAGGCCActctatactctaatcaaggaaACCCAGAGGAcaaatactcatctagtagaatgggaaccagaggcaTAAACAGctttcaaaaccttaaagcaggccctagtTTCAGCTCCAGccttaagccttcccacaggacaaaacttctctttatatatCACAGAGAGAGCAAgaatagctcttggagtcctCACTCAGACTCATGGGACAACCTCACAACCAGCGGCATATacaagtaaggaaattgatgtagtagcaaaaggctggcctcatTGTTTATGGGTAGTTGCAGCAGTGGCCATGTTAGTatcagaggctatcaaaataatacaaggaaaggatctcactgtctgcactactcatgatgtaaatggcgTATTAGGTGCCAAAtgaagtttatggctatcagacaaccACCTGCTCAGATACCAGAcactactccttgagggaccGGTGCTAAAAATACGCACGTGTGTAGCCCTCAActctgccacttttctcccagaggatggggaaccaattGAGCATGTCAGCCAAAAAATTGTAGTCCACACTTATGCCGCCTAAGAGGATCTCTTAGAggtccccttagctaatcctgaccttaacctatataccgATAGAAGTT--------------------------------------ATATATAGTGATGTAACAGTACTTGAAACTAAGCCTTTTCCCCCCTGGGACCAGTGCCCAGTTAGTAGAACTAGTGGTGCTTACCCGAGCCTAAGaactgggaaaggaaaaaagaata--------------------------------------------------------------aacgtATAcacagatagcaagtatgcttatctaattcTACATGCctatgctgcaatatggaaagaaagggagttcctaacctctgggggaacacccattaaataccacaaggaaaccatggagttattgcacgccgtgcaaaaacccaaggaggtggcagtcttacactgctgaGGCCAtcaaaaaagtgaaggaaaaagggCAGAAGGAAACTATCAGGCAGAAGCTGAGGCCAAAATTGCTGCCAGGTGGAACCTCCCATTAGAAATACctatggagg i papAnu2.chr3 C 0 N 0 s chlSab2.chr2 15083612 5609 - 90373283 AAGTCAGGG-AGGAGGGCTGGTCTGGGGGTCTGGGAGTCCACCTGGAGTCTCTCTGAGAGTGGGGAAAAACGAAGACCTTGCTCTGCATTTCAAGCATCTTTCAAGTAAGTCTCACTGAAGAGGGTCAGCCCTTCCCTGGGGAATGTCAGGTTTTGAAAATCTCATAGCATCCTGTGCTGAACTGTGGGCAGGAATCCTAGAGCTATTTTCCTTTTCTCCTTCTTCCAGATCAGAGCATCAGATACTGCCCTAATTATAGGTCCTTTCTATTAAAAATGTAAGTGCTCTCCAAGtgagaggtgaggccagctggacttcctgggtcgagtggggac-ttggggaactttcttgtcttacaaggggattgtaaaactcaccaatcagcgctctgtaaaacacaccaatcagcaggattctaaaagtagccaatcacaggaaggattgaaaaaagggcactctgataggacagaaacagaacatggaaggggacaataagggaataaaaactggccaccccagccagcagcagcaacccacttgggtcccctaccaccctgtggaaactgttcttttactcttcacaataaatcttgctactgctcattctttggctccttgccatctttaagagctgtaacactcacggtgaaggtctgcagcttcattcttgaagtcagcaagaccatgaacccactggcaagaaccaa--ccagacacatcttaggggctTATCTGGGATATCAccacagggtgagtaccatcagacttctttcgcttgctattctgtcctatttttccttagaattcaggggctaaacaccgggcacctgtc--------agtcagttaaaagcaactagcacagctg-ccaga--aaa-------gtgtcaggatttttgggaaggggctctctaacaacccccaactctttggagtcaggagtgttggtttgcctggaaccagcttctgctttccctgcatttctgggctaagccaagggtcaacaaagaggaaaactaatcagctctgaggtcccaacaaaaagttgattgaccctgcagctattagcagagctctcaaagttatgttgcccaagcgagactcacccatctgtcctatctatcctgacccttgtctcctg---ggtcctaatgcctgtcagac-aactttctCTCACCTCTCTTCTCCGACGCTAGTCCTGCTTCTAAAAA--ACTCCCTGTCCCTGGTGCTCTACTAGTTTCTCCTATAAGAATGATTTCTAATACAGATTTTGGGACTCTGTTCCCTTCTTCAGGCACCCGGGTTCACAAATCAGAAAGAGCCAAATTCTTCAATGGGAAATAGGTACCCTGGGGCACATAATGTTTGCCCAGAGCCCTGCTGCTGGGGGTACTATCTGGAATTTTAGGATCCCTCCTCAGACTAGCAGGCCTAACAAAGGCTATTCCTGAAGCTAGGATATGGGGAGACTCACAAATTATAGACTCCAAAATTGCGGAGATATCCTTCCTATTCATATGATGAGAAGTGACGACAAAAGACATCACTTATCAAGCCCTGGAGATCCCTTCCCTCCCTCAAGGTATGGCCCTCCACTCCGTGTTGAGGCATATCTTCTTCATAGGACAAGGTTAGGGTCCCAATACCAACAGGAGAAAATGCTTAAGACTCTAACAGGTTTTCGAGAATGCATCAGTAAGGGCCACTAAATCAGACCTTTCTCAGTCCTCTTTGTGGTCTAGGAGGAAAATAAGTGTTTCCACTGCTGCTTCGGTGAGTGCAACTATTCTGAATAGTAGGGTCCAGGGACCATTGCAGGTTCTTGAGTGGG-AAAAAACAGACCAAAACCACGGGCGGTTTTCC-TTCTGttttagatgggaaacactcaggcatcaataagctcacccttgaaatgcatcctaagccattgggaccaatttgacccgcaaaccctgaaaaagaagcagcttatttttttctgcactatggcctggctccaatattctctccctgatggggaaaaatggccacctgagggaagtgtaaattataatactatcctgcaacttgaccatttcagtaagagggaaggcaaatggtgtgaaataccttacatccaagttttctttttattgaaggataatccacaactatgcaaagttcgcaatctacattccacaggaggaactctcagcttacccccatattctagcctccctacagctccccttcctattaatgatgagcctcctctaatctcccacacccagaaggaaacaagcaaataaatctccaagggaccataaacccccccactcccccgcaggttatagattatgtccccttcaagctgcagggggaggggaatttggcccaacctaggtacatggcccc-ttctccctctctgatttaaagcagatcaagatagacctggggaagttttcagatgatgctgatagttatatagatgtcttacagggtctagggcaaatcttcaacctcactaggagtgatgtcatgctattgttagaacaaaccctggcttttaatgaaaagaatgtggctttagctgcggcccaagagtttggagatacctggtatcttagtcaagtaaatgatagaatgacagctgaagaaagggacaaattccttactgagcagcaagccatctccagtatggatccccactgggccttccactcaggtcatggggactagagtcgcaaacatctgttgacctgtgtcaacaaagaagaattaggaaaaatcccatgaattattcagtgatgtccaacataactcagggaaaggaagaaaatcctatcaccttccttgagtggctatgggaggcctgaagaaaatatactcccctttcacttgattccctcgagggtcagttgattctaaaagaaaaatgtattacccaatcagctgaagatatcaggagaaagctccaaaagctagccctgggtcctgaacaaaatttagaggcattattaaacctggcaacctcggtgttctatagtagggaccaagaggaacagaccaaaaaggaaaagtgagataagagaaaggccacagccttagccatggcccccagacaaacaaaccttgg-tggttcagagaggacagaaaatggaacaggctaatcacgcggtaggacttgttatcagtgtgggttgcaaggacgctttaaaaaagattgtccagtgagaaacaagccacctccttgcccatgtccactatgccaaggcaatcattggaaggtgcactgccccagaggacaaaggctttctgggccagaaacccccaaccagatgatccaacaacaggactgagggagcccagggcaagtgccagctcatgtcatcaccctcactgagccccaggtaagtttaaccattgagggccaggaaattcacttcctcctggacactgacaccaccttctcagtgttaatctcctgccccaaacagctgtcttcaaggtccattaccatccgaggaatcctgagacagcctgtaaacaggtatttctcccacctcctcagttgtaattgggagactttgccctttttacttgcctttcttgttatgcctggaagtgccacacccttattggg-gggggtgacatattagccaaagctattatctacatgaatatgggggataagttacccatttgttgtcccctacttgaggagggagtcaaccctgaagtctgggcattggaagga-aattcagaagggcaaaaaatgcctgcccagttcaaatcaagctaaaagaccccatcacttttccttatcaaaggcaatatcccttaaggcctaaagttcataaaggattaaaagatatcattagacatttaaaagctcaagccttagtaagaaaattcagcagtccctgcaacaccccaattctagaagtacaaaagcaaaatggtcagtagagactagtgcaagatcttagactcatcaatgaggcagtaattcctctatctccagctatagccaaccgctataccctgctctctcaaataccagaggaagcagaatggtttactgttctggacctcagggatgccttctgcattctcctgcactctgactcccagtttctctttgcctttgaggatcccacagaccacatgtcccaacttacatggacagtcttgcctcaaggttttagggatagccctcatctgtttggtcaggcactggcccaaaatctaagccacttctcaagttcaggaactctggtcctttagtatgtggatgatttacttttggctaccaatttggaagcctcatgccagcaggttactctagatctcttgaactttctagctaatcaagggtacaaggtatgtaaatcaaaggcccagctctgcctacagcaagtcaaatatctagacctagtcttagccagaggaaccagagccctcagcaaagaatgaatacagcctatactggcttgttctcaccctaagacattaaaacagttgcaggagttccttgggatcaccagcctttgccaactatggatccccagatacagcgagatgaccaggccactctatatgctaatcaaggaaacccagagggcaaatactcatctagtagaatgggaaccagaggcataaacagctttcaaaaccttaaagcaggccctagttccagctccagccttgagccttcccataggacaaaacttctctttatatatcacagagagagcaggaatagctcttagagtccttactcagactcatgggacaacctcacaaccagcagcatacctaagtaaggaaattgatgtagtagcaaaaggctggcctcattgtctatgagtagttgcagcagtggccatgttagtatcagaggctatcaaaataatacaaggaaaggatctcactgtctggactactcatgatgtaaatggcatattaggtgccaaatgaagtttatggctatcagacaaccacctgctcagttaccagacgctactccttgagggaccagtgctaaaaatatgcacatgtgtagccctcagccctgccacttttctcccagaggatggggaaccaattgagcatgactgccaaaaaattgtagtccagacttatgccgcccaagaggatctcttagaggtccccttagctaatcctgaccttaacctatataccgatagaagttcatttatggagaatgggatacgaagggcaagttatgccatagttagtgatgtaacagtacttgaaactaagcctctttccccctgggaccagtgcccagttagcagaactagtggtgcttacccgagcctaagaactgggaaagaaaaaaagaata--------------------------------------------------------------aatgtatacacagatagcaagtatgcttatctaattctacatgcccatgctgcaatatggaaagaaagggggttcctaacctctgggggaacccccattaaataccacaaggaaaccatggagttattgcacactgtgcaaaaacccaaggaggtggcagtcttacactgccgaggccatcaaaaaggtgaaggagaaaaggcagaaggaaactgtcaggcagaagctgaggccaaaattgctgccaggcggaacctcccattagaaatacctatggaac i chlSab2.chr2 C 0 C 0 a score=1478359.000000 s hg38.chr21_KI270874v1_alt 158618 1190 + 166743 gaccctcggtatggaacaaccctctccaagaaattaagccccagtattccc-gtccaaaacagaatggggactttcatgggggcatagttttctcccctcggggtggttaatgacagaagagggaaaagtactcatacccga----agccagccagtgggaaatacttaagaccctctgctaaaccttttatatgggtattgagaacattcatcaaatggccaaatccctatttacacagtcaattctcc-ccagaccatccggcaagtagtcaaagcctatgaggtgtgccaaaggaataatccattggtccatcataaggctcccctcggggaaacaaagaacaggtcactatcctggagaggattggcagttagacttcatccatatgcctaaatcaaggggatttcaatac---ttggtatgtgttgatacctttacaaattggatggaagccttcccttgcaagagagagaaagctcaggaagtggtt--agtcctaattcatgaaataattcctagatttgggcttccccaaaacttacaaagtgacaatggtccggcttttaaagccatgataactcagggaatttccagggcactagggatacaatatcaccttcagtgcacgtggaggccacaaacctcagggaaggttgagaaagcaaatgaaacactcaagaggcacttaaggaaactaacacaagaaactcatctcccatggcctactttcttgcccatggccttgttgagaatctaaaattcccctcacaaaatggggctcagtccatatgaaatgctgtatggatgaccttttctcacaaatgacctcttacttgatcaggaaatggccaacttggtcaaagacataacttctttggaaaaataccaacaaaacattaaaaacctacctgaaggacatcacagagaaaagggaacagagttgttccaactgggagatctagtgttggtcaagtcccttccctctaccttcccatctatgaattccttgtgggaaggaccatactcagtaatcctctctactcccactgcagttaaggtagcaggaggggaatcttggattcaccacacccgagttaaactttggacaccccctgaggaacctgcaggaccatcagatcaggagtcccaagatcagccagaccagcctcaatacacctgtgaaccattggaggacttg s panTro4.chr21 3771707 1190 + 32799110 gaccctcggtatggaacaaccctctccaagaaattaagccccagtattccc-gtccaaaacagaatggggactttcatgggggcatagttttctcccctcggggtggttaatgacagaagagggaaaagtactcatacccga----agccagccagtgggaaatacttaagaccctccgctaaaccttttatatgggtattgagaacagtcatcaaatggccaaatccctatttacacagtcaattctcc-ccagaccatccagcaagtagtcaaagcctatgaggtgtgccaaaggaataatcccttggtccatcataaggctcccctgggggaaacaaagaacaggtcactatcctggagaggactggcagttagacttcacccatatgcctaaatcaaggggatttcaatac---ttggtatgtgttgatacctttacaaattggatggaagccttcccttgcaagagagagaaagctcaggaagtggtt--agtcctaattcatgaaataattcctagatttgggcttccccaaaacttacaaagtgacaatggtccggcttttaaagccatgataactcagggaatttccagggcactagggatacaatatcaccttcactgcacgtggaagccacaaacctcagggaaggttgagaaagcaaatgaaacactcaagaggcacttaaggaaactaacacaagaaactcatctcccatggcctactctcttgcccatggccttgttgagaatctaaaattcccctcacaaaatggggctcagtccatatgaaatgctgtatggatgaccttttctcacaaatgacctcctacttgatcaggaaatggccaacttggtcaaagacataaattctttggaaaaataccaacaaaaccttaaaaacctacctgaaggatatcacagagaaaagggaacagagttgttccaaccgggagatctagtgttggtcaagtcccttccctctaccttcccatctatgaattccttgtgggaaggaccatactcagtaatcctctctactcccactgcagttaaggtagcaggaggggaatcttggattcaccaaacctgagttaaactttggacaccccctgaggaacctgcaggaccatcagatcaggagtcccaagatcagccagaccagcctcaatacacctgtgaaccattggaggacttg i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4527836 1198 + 32716333 gaccctcagtatggaacaaccctctccaagaaattaagccccagtgttccctgtccaaaacagaatggggactttcatggaagcatagttttctcccctcagggtggttaatgacagaatacggaaaagtacacatacctgaagccagccagccagtggaaaacacttaagaccctccgctaaaccttttatatgggtattgagaacattcatcaaatggccaagtccctatttacagggtcaaatctcctccagcccatccagcaagtagtcaaagcctgtgaggtgtgccaaaggaataatctcttggtccatcataaggcttccctgaggg-aacaaagaacaggtcactatcctggagatgactggcagttagacttcacccatatgactaaatcaaggggatttcaatacttgttggtctgtgttgataccttaaaaaattggatggaagccttcccttgcaagacagagaaggctaaggaagtggtt--agtcctaattcatgaaataattcctagatttgggcttccccaaaacttacaaagcaacaatggtccagcttttaaagctatgataactcagggaatttacagggcgctagggatacaatatcaccttcattgcacctggaggccacaatcctcagggaaggttgagaaagcaaatgaaacactcaagaggaaattaaggaaactaacacaagaaactcatctcccatggcctactctcttgcccatggccttgttgagaatccaaaattctcctcacaaaatggggctcagtccatatgaaatgctgtatggatgaccttttctcacaaatgacctcctacttgatcaggaaactgccaatttggtcaaagatataacttctttggcaaaatatcaacaaaaccttaaaaacctacctgaaggatatcacagagaaaagggaacagagttgtttcaaccgggagatctagtgttggtcaagtcccttccctctacctccccatctatggactctttgtgggaaggaccatactctgtagtcctctctaccgccaccgcagttaaggtggcaggagtggaatcttggattgaccacacccgagttaaactttagacaccccctgaggaacctgcaggaccgtcagctcaggagtcccaagatcagccagaccagcctcgatacacctgtgaaccattggaggacttg i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168640422 1194 - 198365852 gaccctcggtatggaacaaccctctccaagaaattaagccccagtatctcctgaccaaaacagaatggggactttcatgggggcatagttttctcccctcggggtggttaatgacagaag-gggaaaagtacttataccgga----agccaaccagtggaaaatacgtaagaccttccactaactcttttatatgggtattgagaacattcatcaaatggccaaatccctatttacagggccaaatctcctccggaccatccggcaagtagtcaaagcatgtgaggtgtgccaaaggaataatcccttggtccatcgtaaggcccctctggggg-aacaaagaataggtcactatcctggagaggactggcagtcagacttcacccatatgcctaagtcaaggggatttcaatacttgttggtctgtgttaatacctttacaaattggatagaagccttcccttgcaagaaagagaaggctcaggaagtggttaaagtcctaattcatgaaataattcctagatttgggcttccccaaagcttacaaaatgtcaatggtccaacttgtaaagccatgataactcagggaatttccagggcgctagggatacaatatcaccttcactgcacctgaaggccacaatcctcagggaaggttgagaaagcaaataaaacactcaagaggcacttaaggaaactaacacaagaaactcatcacccatgggctactctcttgcccatgaccttgttgagaatccaaaattctcctcacaaaatggggttcagtccatatgaaatgctgcatggatgatcttttctcacagatgacctcctacttgatcaggaaatggccaacttggtcaaagatgtaacttcttcagcaaaataacaacaaaacctttaaaaccttcctgaaggatgtcacagagaaaagcgaacagagttgttccaaccgggagatctagcgttcgtcaagtcccttccctctacct-ccaaactatggattccttgtgggaaggaccatactcagtaaccctctctacccgcactgcagttaaggtggcaggaggggaatcttggattcaccacaccgaagttcaactttggacaccccctgaggaacctgcaggaccgtcaggtcaggagtctcaagatcatccagaccagccttgatacacctgtgaaccactggaagacttg i rheMac3.chr3 C 0 C 0 s macFas5.chr3 162304917 1176 - 192294377 gaccctcggtatggaacaaccctctccaagaaattaagccccagtatctcctgaccaaaacagaatggggactttcatgggggcatagttttctcccctcggggtggttaatgacagaag-ggggaaagtacttataccgga----agccgaccagtggaaaatacgtaagaccttccactaacccttttatatgggtattgagaacattcatcaaatggccaaatccctatttacagggccaaatctcctccggaccatcgggcaagtagtcaaagcatgtgaggtgtgccaaaggaataatcccttggtccacagtaaggcccctctggggg-aacaaagaataggtcactatcctggagaggactggcagtcagacttcacccatatgcctaagtcaaggggatttcaatacttgttggtctgtgttaataactttacaaattggatagaagccttcccttgcaagaaagagaaggctcaggaagtggttaaagtcctaattcatgaaataattcctagatttgggcttccccaaagcttacaaaatggcaatggtccaacttgtaaagccatgataactcagggaatttccagggcgctagggatacaatatcaccttcactgcacctgaaggccacaatcctcagggaaggttgagaaagcaaataaaacactcaagaggcacttaaggaaactaacacaagaaactcatcacccatgggctactctcttgcccatgaccttgttgagaatccaaaattctcctcacaaaatggggttcagtccatatgaaatgctgcatggatgatcttttctcacagatgacctcctacttgatcaggaaatggccaacttggtcaaagatgtaacttcttcagcaaaataacaacaaaaccttaaaaacctacctgaaggatgtcacagagaaaagcgaacagagttgttccaaccgggagatctagcgttcgtcaagtcccttccctctacctcccaaactatggattccttgtgggaaggaccatactcagtaaccctctctacccgcactgcagttaaggtggcaggaggggaatcttggattcaccacaccgaagttcaactttggacaccccctgaggaacctg---------caggtcaggagtc----------ccagaccagccttgatacacctgtgaaccactggaagacttg i macFas5.chr3 C 0 C 0 s chlSab2.chr2 15089221 1194 - 90373283 gaccctcggtatggaacaaccctctccaagaaattaagccccagtatctcctgatcaaaacagaatggggactttcatgggggcatagttttctcccctcggggtggttaatgacagaag-gggaaaagtactaatactgga----agccaaccagtggaaaatacataagaccatccactaacccttttatatgggtattgagaacattcatcgaatggccaaatccctatttacagggccaaatctcctctgggccatccggcaagtagtcaaagcatgtgagatgtgacaaaggaataatccattggtccatcgtaaggcccctctggggg-aacaaagaataggtcactatcctggagaggactggcagtcagacttcacccatatgcctaaatcaagggg-tttcaatacttgttggtctgtgttaatacctttacaaattggatagaagccttcccttgcgagaaagagaaggctcaggaagtggttaaagtcctaattcatgaaataattcctagatttgggcttccccaaagcttataaaatggcagtggtccaacttgtaaagccacgataactcagggaatttccagggcgctagggatacaatatcaccttcactgcgcctgaaggccacaatcctcagagaaggttgagaaagcaaatgaaacactcaagaggcacttaaggaaactaacacaagaaactcatcacccatggcctactctcttgcccatgaccttgttgagaatccaaaattctcctcacaaaatggggttcagttcatatgaaatgctgtatggatgattttttctcacagatgacctcctacttgatcaggaaatggccaacttggtcaaagatgtaacttctttggcaaaataacaacaaaaccttgaaaacctacctgaaggatgtcacagagaaaagcgaacagagttgttccaaccaggagatctagcgtttggcaagtcccttccctctacctcccaaactatggattccttgtgggaaggaccatactcagtaatcctctctacctgcactgcagttaaggtggcaggaggggaatcttgaattcgccacacccaagttcaactttggacaccccctgaggaacctgcaggaccgtcaggtcaggagtcccaagatcagccagaccagccttgatacacctgcaaaccactggaggacttg i chlSab2.chr2 C 0 N 0 a score=1476.000000 s hg38.chr21_KI270874v1_alt 159808 2 + 166743 cg s panTro4.chr21 3772897 2 + 32799110 tg i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4529034 2 + 32716333 cg i nomLeu3.chr25 C 0 C 0 s rheMac3.chr3 168641616 2 - 198365852 cg i rheMac3.chr3 C 0 N 0 s macFas5.chr3 162306093 2 - 192294377 cg i macFas5.chr3 C 0 N 0 a score=495178.000000 s hg38.chr21_KI270874v1_alt 159810 1900 + 166743 tctcctatttcagaaggaaacatcccaaactaaaaaggctccttcagctgatcctgaggaaaaaccccttcctacttaaaaaagttaagtgaaaacctacataatctttaacacctctccttgcccctttaatggaatccttttactgtttcatcacattattaggcagtatactaaacatactctttgcagtaggattatatactgtagcttctgccgggatgaaaatcctaatcacatcaaccttttttctatcatccttcgttctgatggcaatttaatcctacctttaactcagactggataaaaagacctcatcttccagggaaccctctttacctttctacttacactttgtctatataaccctcctgcttccttggataccccacatagtcacccctccccttccactggctcctaattacctctacaagactctcaacttaacccactctctgttaaaccagtccaatcc--ttccctggcaaatgactgtcggctttgtatctctctatcagccactgcttatgttgccactctcgttcccac--aaaaaactgggtctttattaacttaacctaccactcccattatgaaggaagagaccctttccaacttctaaatatgcaatcattagctgacttccccatctctgataggaacaa---------agcagggcacacaatccagcgtttacactcttacatttccaacctcacctattgctcctcacaggagcagtgaaaagcacatacacagccctgtaaccaggaataccatctaattttccaagcccctttatgcatccaactcaacctgttatcaggcctgcccctggggcacctattatcccatcagtgtaattacaccctacaacttcaagccccaactgatcatagtaacttccgagtcacccaaacagctccattcagatggcttttctgcttctcaggatccccaaaaatcatcaccttctccctgcttaacaaacagtctgggttttgtaatggcaaacacattccctgcatgaccattctcctctggaccccctgcagcagtgtccccaacactagcaaatgccttctcatcccctctttcaattactctcttgaatggttcctagtagatacaaaatgattttatctccagtgggaaaatggaacacagggagccactcagtttcctcccaacacccatttccagccgctcaccaaagctaccttcgcgagtactctaagagtatgggaaaatgaaaacaacaaattcacacacctttttaacatacacaaccagttctgtctacccagccaaggcatattcttcttatatggaacttcaacctatatctatctgcctccccaccaaacggacaggcacctgcaccttagtcttcctaagtcccaccattgacatcgccccaggaaatcagaccctatcagtgcccctcaaggctcaagaccatcagtgcagggccataaaactaatacccctacttatagggttaggaatggcccctgctacaggaaccagaatagccagtttatctacttcactatcctattaccacgcactctcaaaggatttctctgacagtgtgcaagaaataatgaaatctatcctcactctacagtcccaaatagaccctttggcaacagtgactctccaaaactgccgaggcctagacctcctcactgctgagaaaggaggactttgcaccttcttaggggaaaagtgttgtttttacactaacaattcagggatagtatgagacgccacctggcatttgcaggaaaagtcttctgaaatcagacaacacctttcaaacttttataccaacctctggagttgggcaacatggcttctcccctttctaggtcctgtgagagccatcttgctattacttgcct s panTro4.chr21 3772899 1900 + 32799110 tctcctatttcagaaggaaacatcccaaactaaaaaggctccttcagctgatcctgaggaaaaaccccttcctacttaaaaaagataagtgaaaacctacataatctttaacacctctccttgcccctttaatggaatccttttactgtttcatcacattattaagcagtatactaaacatactctttgcagtaggattatatactgtagcttctgccgggatgaaaatcctaatcacatcaaccttttttctatcatccttcgttctgatggcaatttaatcctacctttaactcagactggataaaatgacctcatcttccagggcaccctctttacctttctacttacactttgcctatataaccctcctgcttccttggataccccacatagtcacccctccccttccactggctcctaattacctctacaagactctcaacttaacccagtctctgttaaaccagtccattcc--ttccctggcaaacgactgttggctttgtatctctctatcggccactgcttatgttgccactctcgttcccac--aaaaaactgggtctttattaacttaacctaccactcccattatgaaagaagagaccctttccaacttctaaatatgcaatcattagctgacttccccatctctgataggaacaa---------aacagggcacacaatccagcgtttacactcttacatttccaacctcacctattgctcctcacaggagcagtgaaaagcacatacacagccctgtaaccaggaataccgtctaactttccaagcccctttatgcatccaactcaacctgttatcaggcctgcccctggggcacctattatcccatcagtgtaattacaccctacaacttcaagccccaactgatcatagtaacttccgagtcacccaaacagctccattcagatggcttttctgcttctcaggatccccaaaaatcatcaccttctccctgcttaacaaacagtctgggttttgtaatggcaaacacattccctgcatgaccattctcctctggaccccctgcagcagtgtccccaacactagcaaatgccttctcatcccctctttcaattactctcttgaatggttcctagtagatacaaaatggttttatctccagtgggaaaatggaacacagggagccactcagtttcctcccaacacccatttccagccgctcaccaaagctaccttcgcgagtactctaagagtatgggaaaatgaaaacaacaaattcacacacctttttaacatacacaaccagttctgtctacccagccaaggcatattcttcttatatggaacttcaacctatatctatctgcctccccaccaaatggacaggcacctgcaccttagtcttcctaagtcccaccattgacatcgccccaggaaatcagaccctatcagtgcccctcaaggctcgagaccatcagcgcagggccataaaactaatacccctacttatagggttaggaatggcccctgctacaggaaccagaatagccagtttatctacttcactatcctattaccacacactcttgaaggatttctctgacagtgtgcaagaaataatgaaatctatcctcactctacagtcccaaatagactctttggcaacagtgactctccaaaactgccgaggcctagacctcctcactgctgagaaaggaggactttgcaccttcttaggggaaaagtgttgtttttacactaacaattcagggatagtatgagacgccacctggcatttgcaggaaaagtcttctgaaatcagacaacacctttcaaactcttataccaacctctggagttgggcaacatggcttctcccctttctaggtcctgtgagagccaccttgctattacttgcct i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4529036 1885 + 32716333 tctcctatttcagaaggaaacatcccaaactaaaaaggctcctacagctgatcctgaggaaaaaccccttcctacttaaaaaagataagtgaaaacctacataatctttaacacctctccttgcccctttaatggaatccttttactgtttcatcacattattaagcagtatactaaacctactctttgcagtaggattatatactgtagctcctgctgggatgaaaatcctaatcgcatcaaccttttttctatcatgcttctttctgacagcaatttaatcctacctttaactcagactggataaaatgatctcatcttccagggcaccctctttacctttctacttactctttgcctatataactctcctgcttccttggataccccacatagtcacccctccccttccactagctcttaattacctctacaagactctcaacttaacccactctctgttaaaccagtccaatccttttccctggcaatcaactgttggctttgtatctctctatcagccactgcttatgttgccattctcattcccgcaaaaaaaactgggtctttattaacttaacctaccacccccattatgaaggaagagaccctttccaacttctaaatatgcaatcattagctgacttccccatctctgataggaacaaaaataccctaacaggacacacaatccagcatttacgttcttacatttccaacctcacctatt-------acacaagcaatgaaaagcacatacacagccctgta---------accgcctaactttccaagcccctttatgcatccaatgcagcctgttatcaggcctggccctggggcacctattatcccatcagtgtaattacatcctacaacttcaagccccaactgatcatagtaacttccaagtcacccaaacagctccattcagatggcttgtctgcttctcaggatcccccaaaatcatcacttcctccctgctt----aacagtctgggttttgtaatggcaaacacactccctgcatgaccattctcctctggaccccctgcagcagtgcccccaccactagcaaatgccttctcatcccctctttcaatcactctcttgaatggttcctagtagatagaaaatggttttatctcttgcgggaaaatagaacacagggagccactccatttgctcccaacacccatttccaggcactcaccaaagctaccttggcgagtactctaggagtatgggaaaatgaaaacaacaaactcacacaactgtttaacatacacaaccagttctgtctccccagccaatgcatattcttcttatgtggaacttcaacctatatctatctgcctccccaccaaatggacaggcacctgcaccttagtcttcctaagtcccaccattgacattgccccaggaaatcagaccctatcagtgcccctcaaggctcaagaccatcagtgcagggccataaaactaataccactacttatagggttaggaatgg-ccctgctacaggaaccagaatagccagtttatctacttcactatcctattaccacacactctcaaaggatttctctgacagtgtgcaagaaataatgaaatctatcctcactctacagtcccaaatagactctttggcaggagtgactctccaaaaccgccaaggcctagacctcctcactgctgagaaaggagaactttgcaccttcttaggggaagag---tgtttttacactaacaagtca-ggatagtatgagatgccacccggcatttgcaggaaaaggcttttgaaatcag---acacctttcaaactcttataccaacctctggagttgggcaacatggcttctcccctatctaggtcctgtgagagccatcttgctattacttgcct i nomLeu3.chr25 C 0 C 0 a score=0.000000 s hg38.chr21_KI270874v1_alt 161710 784 + 166743 tcaggccctgtatttttatttttttattttttttttttaattttttttttttattatactctaagttttagggtacatgtgcacattgtgcaggttagttacatatgtatacatgtgccatgctggtgcgctgcacccactaacgtgtcatctagcattaggtatatctcccaatgctatccctcccccctcccccgaccccaccacagtccccagagtgtgatattccccttcctgtgtccatgtgatctcattgttcaattcccacctatgagtgagaatatgcggtgtttggttttttgttcttgcgatagtttactgagaatgatggtttccaatttcatccatgtccctacaaaggacatgaactcatcattttttatggctgcatagtattccatggtgtatatgtgccacattttcttaatccagtctatcattgttggacatttgggttggttccaagtctttgctattgtgaatagtgccgcaataaacatacgtgtgcatgtgtctttatagcagcatgatttatagtcctttgggtatatacccagtaatgggatggctgggtcaaatggtatttctagttctagatccctgaggaatcgccacactgacttccacaatggttgaactagtttacagtcccaccaacagtgtaaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgactttttaatgattgccattctaaccggtgtgagatgatatctcatagtggttttgatttgcatttctctga e nomLeu3.chr25 4530921 0 + 32716333 C e panTro4.chr21 3774799 0 + 32799110 C a score=711001.000000 s hg38.chr21_KI270874v1_alt 162494 2701 + 166743 tcaggccctgtatttttaacatccttgccaaatttgtttcctctaggattgaagtcatcaagctacaggtggtcttacaaatggaaccccaaatgagctcaactcacaacttctaacgaggacaactggattgacccactggccctttgactggcctagagagttcccctctggaggacactaaaactgcagggccccttcttcacccctatccagcagttagtagctagaatggtcattgcccagttcccaagagcagctgtggtgtcctgtttaga-gggCTATtgagaggtgaggccagctgaacttcctgggtcaagtggggacttggggaactttcctgtcttacaagaggattgtaaaatgcaccaatcagtgctctgtaaaacacactaatcagctctctgtaaaacacatcaatcagcactctgtaaaacacaccaatcagcactctgtaaaacgcaccaataagcactctgtaaaatgcaccaatcagcaggatcctaaaggtagccacctttcactcttcacaataaaccttgctaccactcactctttgggtccttgccatctttaagagctgtaacactcaccgtgaaggtccacggcttcattcttgaagtcagcaagactgtgaacccactggcaggaaccaactctggacacaCAAGGACTGCGAGCACAGTCAGCACTTTGGCAGAGAAAGGTCACCTGGATGTTACATGGCGAGGCTACAGGGTTGTAAGGGTCACTTTACCTTCAGCTCTGCACTGAGGCTGGCTAGTCCTTGAGAAACTAAGTGACCTGCTTCTCAGCTGTGCAAGTAAAAAATCTTGGCAACACATCATCCAAACCATGGCTCAGCTGCTGCAGGGCCCCACAGAATAGGGCCCTGCCTTTCCTTCCCATCAGCATCCCATCTGACCCTGTCTGAGTCCCATGATGGCTGGCTGGGTGTGGGCAGCATGTACACGGGAGATCATGGGTGCTTGAAAGAAGTCGAGGCTGTACCTTTCTTTGCAAGAACCTGTTCTCTTTCCCTCCTTGTTTTTAAAAATATTCAATACAGTATAATTTTATAATGATAACAGAACCTGGTCCGACTTCTGTGGAAAAGGATTGATCAACAAGCCTGAGTTGGGGGTTTTTCTGTTCAGTTCGTATTAGGGCCCCTCTAGGGGAGTTTTCTGTGTTGTTTAGGAAGGGCTTCTTTCATAAAGAAGTAggcccagtgtggtggcttgcacctgtaatcccaacattttgggaggccgaggcaggaggattgcttgagcccaggagttcgagaccagcctggccaccatagtgagactttgttctctaccaaaaatttaaaaattagctgggcatagtggcgcatgcctgtagttccagctacttgtgaggctgaggtgggagaatcgcttgagcctgggaggtcgaggctgcagtgagctatgactgcaacactgcacacagcctgggctacagaacaagacactgtctcacaaaaagaaaaaaCAAGCAACTTATTCATTTTTTGTGTTGAATGTGACCCACGTGCATCTTAAAAGAAAATAAAATTCCTGTATCCAAGCT---AAAAAAaaaaattatatgaaatcgaaaaagaacccaaatagccaatacattcctaagcaaaaagaacaaagctggagctatcacattactaacttcagactatactacaaggctactgtaaccaaaacagcatagtactggtacaaaaacacatagaccaatgaaacaggatatagagcccagaaataatgtgacacacctgccaaaatctgatcattgacaaaattgacaaaaacaaacaatggggaatagtctctctattcaataaatggtgctgggataactggctagccatatgaagaagattgaaactgggtgccttccttacactatatataaaaattcacttcagatgtattaaagacttaattctaaaaccaaaaactatagaaaccctggaaaacaacctaggcaataccattctggatataatacctggcaaaaacctcatgacaaagacacagaaaaaaattgcaaaaaaaaaaaaaacaaaaaaaaacaaaaaaaaaaaCTGGGGTtggctggctagatggccgaataggaacagctctggtctacagctcccagtgagatcaaagcagaaggtgggtgatttctgcatttccaactgaggtacatggctcatctcattaggactggttagacagtggatgcagccaatggagggtgagccgaaggagggtgggtcgtcacctcacctgggaagtgcaaggggtcgaggaactccctcccctagccaagggaagccatgagggactgtgccatgaggaagggtgaattttggctcagatactatgcttttcccacagtcttcaccacccacagaccaggagattccctcgggtgcctacacca-ccagggccctggatttgaagcacaaaactgggtggccatttgggcagacaccgagttagctgca---------------gttttgttttgttttgttttgttttgttcatacccaggtggtgcctggaattccagatagacagaacagttcattctgatggaaagggggctgaagccagggagccaagtggtctagtttagcagatcccacccacatggagcccagcaagctaagatccactggcttaaaattcttgctgcc s panTro4.chr21 3774799 2709 + 32799110 tcaggccctgtatttttaacatccttgccaaatttgtttcctctaggattgaggccatcaagctacaggtggtcttacaaatggaaccccaaatgagctcaactcacaacttctaacgaggaccactggattgacccattggccctttgactggcctagagagttcccctctggaggacactaaaactgcagggccccttcttcacccctatccagcagttagtagctagaatggtcattgcccagttcccaagagcagctggggtgtcctgtttaga-gggCTATtgagagatgaggccagctgaacttcctgggtcaagtggggacttggggaactttcctgtcttacaagaggattgtaaaatgcaccaatcagtgctctgtaaaacacactaatcagctctctgtaaaacacatcaatcagcactctgtaaaacacaccaatcagcactctgtaaaacgcaccaataagcactctgtaaaatgcaccaatcagcaggatcctaaaggtagccaccttttgctcttcacaataaaccttgctaccactcactctttgggtccttgccatctttaagagctgtaacactcaccgtgaaggtccacggcttcattcttgaagtcagcaagactgtgaacccactggcaggaaccaactctggacacaCAAGGACTGCGAGCACAGTCAGCACTTTGGCAGAGAAAGGTCACCTGGATGTTACATGGTGAGGCTACAGGGTTGTAAGGGTCACTTTACCTTCAGCTCTGCACTGAGGCTGGCTAGTCCTTGAGAAACTAAGTGACCTGCTTCTCAGCTGTGCAAATAAAAAATCTTGGCAACACATCATCCAAACCATGGCTCAGCTGCTGCAGGGCCCCACAGAATAGGGCCCTGCCTTTCCTTCCCATCAGCATCCCATCTGACCCTGTCTGAGTCCCATGATGGCTGGCTGGGTGTGGGCAGCATGTACACGGGAGATCGTGGGTGCTTGAAAGAAGTCGAGGCTGTACCTTTCTTTGCAAGAACCTGTTCTCTTTCCCTCCTTGCCTTTAAAAATATTCAATAGAGTATAATTTTATAATGATAACAGAACCTGGTCCAACTTCTGTGGAAAAGGATTGATCAACAAGCCTGAGTTGGGGATTTTTCTGTTCAGTTCTCATTAGGGCCCCTCTAGGGGAGTTTTCTGTGTTGTTTAGGAAGGGCTTCTTTCATAAAGAAGTAggcccagtgtggtggcttgcacctgtaatcccaacattttgggaggccgaggcaggaggattgcttgagcccaggagttcgagaccagcctggccaccatagtgagactttgttctctaccaaaaatttaaaaattagctgggcatagtggcgcatgcctgtagttccagctacttgtgaggcttaggtgggagaatcgcttgagcctgggaggtcgaggctgcagtgagctatgactgcaacactgcacacagcctgggctacagaacaagacactgtctcataaaaagaaaaaaCAAGCAACTTATTCATTTTTTCTGTTGAATGTGACCCACGTGCATCTTAAAAGAAAATAAAATTCCTGTATCCAAGctaaaaaaaaaaaaaattatatgaaatcgaaaaagaacccaaatagccaatacattcctaagcaaaaagaacaaagctggagctatcacattactaacttcagactatactacaaggctattgtaaccaaaacagcatagtactggtacaaaaacacatagaccaatgaaacaggatatagagcccagaaataatgtgacacacctgccaaaatctgatcattgacaaaattgacaaaaacaaacaatggggaatagtctctatattcaataaatggtgctgggataactggctagccatatgaagaagattgaaactgggtgccttccttacactatatataaaaattcacttcagatgtattaaagacttaattctaaaaccaaaaactatagaaaccctggaaaacaacctaggcaataccattctggatataacacctggcaaaaacctcatgacaaagacacagaaaacaattgcaaaaa----------aaaaaaaaaaaaaaaaaaaaaCTGGGGTtggctggctagatggccgaataggaacagctctggtctacagctcccagtgagatcaaagcagaaggtgggtgatttgtgcatttccgactgaggtacatggctcatctcattaggactggttagacagtggatgcagccaatggagggtgagccgaaggagggtgggtcgtcacctcacctgggaagtgcaaggggtcaaggaactccctcccctagccaagggaagccatgagggactgtgccatgaggaagggtgaattttggctcagatactatgcttttcccacagtcttcaccacccacagaccaggagatgccctcgggtgcctacacca-ccagggccctagatttcaagcacaaaactgggtggccatttgggcagacactgagttagctgcagttttgttttgttttgttttgttttgttttgttttgttttgttcatacccaggtggcgcctggaattccagatagacagaacagttcattctgatggaaagggggctgaagccagggagccaagtggtctagtttagcagatctcacccacatggagcccagcaagctaagatccactggcttaaaattcttgctgcc i panTro4.chr21 C 0 C 0 s nomLeu3.chr25 4530921 2655 + 32716333 tcaggccctgtatttttaacatccttgtcaaatttgtttcctctaggattgaggccatcaagctacagatggtcttacaaatggaaccccaaatgagctcaactcacaacttctaccaaggaccactggatttacccactggccctttgactggcctagagagttcccctctggaagacactacaactgcagggccccttcttcacccctatccagcagttagtagctagaatggtcattgcccagttcccaagagcagttggggtatcctgtttagaggggagattgagaggtgaggccagctgaacttcctggatcaagtggggacttggggaactttcctgtcttacaagaagattgtaaaatgcaccaatcagtgctctgtaaaacacactaatcagctctctgtaaaacacatcaatcagcactctgtaaaacgcaccaatcagcactctgtaaaatgcaccaataagcgctctgtaaaatgcaccaatcagcaggatcctaaaggtagccacgtttcgctcttcacaataaacattgctaccactcactctttggg----------------------------tcaccgtgaaggtccacggcttcattcttgaagtcagcaagaccgcaaacccactggcaggaaccaactctggacacaCAAGGACTGAGAGCACAGTCAGCACTTTGGCAGAGACAGGTCACCTGGATGTTACACGGTGAGGCTACAGGGCTGTAAGGGTCACTTGACCTTCGGCTCTGCACTAAAGCTGGCTGGTCCTTGAGAAACTAAGTGACCTGCTTCTCAGCTGTGCAAGTAAAAAATCTTTGCAACACATCATCCAAACCATGGCTCAGCTGCTGCAGGGCCCCACAGAATAGGGCCCTGCCTTTCCTTCCCATCGGCATCCCATCTGACCCTGTCTGAGTCCCATGATGGCTGGCTGGGTGTGGGCAGCATGTACACGGGAGATTGTGGGTGCTTGAAAGAAGTCGAGGCTGTACCTTTCTTTGCAAGAACCTGTTCTCTTTCCCTCCTTGTCTTTAAAAATATTCAATACAGTATAATTTTATA---ATAACAGAGCCTGGCCCAACTTCTGTGGAAAAGGATTGATCAACAAGCCTGAGTTGGGGGTTTTTCTGTTCCATTCTCATTAGGACCCCTCTAGGGGAGTTTTCTGCGTTGTTTAGGAAGGGCTTCTTTCATAAAGAAGTAggcccagtgtggtggcttgcacgtgtaatcccaacattttgggaggccgaggcaggaggattgcttgagcccaggagttcgagaccagcctggccaccatagtgagactttg-tctctaccaaaaatttaaaaattagctgggcatagtggcacatgcctgtagttccagctacttgtcaggctgaggtgggagaatcacttgagcccgggaggtcaaggctgcagtgggctatgactgcaacactgcacactgcctgggctacagagcaagacactgtctcagaaaaagaaaaaaCAAGCAACTTATTCATCTTGTCTGTTGAATGTGACCCACGTGCATCTTAAAAGAAAATAAAATTCCTGTATCCAAGct--aaaaaaaaaaaattatatgaaatcaaaaaagaacccaaatagccaatacattcctaagcaaaaataacaaaggtggagatatcacattactaacttcagactatactacaaggctactgtaaccaaaacagcatagtactagtacaaaaacacatagaccaatgaaacagaatatagagcccagaaataatgtgacacacctgccaaaatctgatcattggcaaaattgacaaaaacaagcaatggggaatagtctctctattcaataaatggtactgggataactggctagccatatgaagaagattgaaactgggccccttccttacaccatatataaaaattcacttcagatgtattaaagacttaagtctaaaaccaaaaactatagaaaccctggaaaacaacctaggcaataccattctggacataatacctggcaaaaacctcatgacaaagacacagaaaacaattgcaaaaa-----------------aaaaaaaaaaaaaactgggattggctggctagatggccaaataggaacagctctggtctacaactcccaaagagatcaaagcagaaggcgggtgattgctgcacttccaactgaggtacatggctcatctcattaggactggttagacagtggatgcagccaatggagggtgagccaaagcagggtggggcatcacctcacctgggaagtgcaagaggtcaaggaattccctcccctagccaagggaagccatgagggactgtgccatgaggaagggtgaattttggctcagatacta-----ctcccacagtcttcaccacccacagaccaggagattccctcgggtgtctacaccacccagggccctggatttcaagcacaaaactgggtggccatttgggcagacaccgagttagctgca----------gttttgttttattttgttttgttttgttttgttcatacccaggtggcgcctggaattccagatagacagaacagttcattctgatggaaagggggctgaagccagggagccaagtggtctagtttagcagatcccacccacatggagcccagcaagctaaggtccactggcttaaaattcttgctgcc i nomLeu3.chr25 C 0 N 0 a score=144598.000000 s hg38.chr21_KI270874v1_alt 165195 1548 + 166743 agcacagcaatctgaatcaacttgggatgctcaaccttggtagcgaaaggggcatctgccattactgaggcttgagtaggcagttttcccctcacagtgtaaacaaacccactgggaagttcaaactgagcagagcccaccacagctcagcaaagctgctgtagccacattgcctctctagattcctcctccctgggcagggaatctctgaaagaaaggcagcagcctcagtcaggggattctagataaaattcccatctcccctgggacagagtacctgggggaagatgtggctgtggggacagctttagcagacttaaatgtttctgcctgccagctctgaaaagagtagcagatctcctagggcagcactcaagctctgctaagaaactgactggctcctgaagtaagtccctgatccccatggcttctgactgggagacacctcccagcaggagtcgacagacacctcatacaagagagctccagctggcatctcgtgggtgcccctctgggacaaagcttccagaggaaggaacaggcagcaatctttgctgttctgctgcctccgctggtgatacccgggcaaacagggtctggagtggacctccagcaaaatccagcagacctgcagcacagggaactgactgttagaaggaaaactaacaaatggaaaggaatagcatcaatatcaacaaaatggacgtccacacagaaaccccatccgaaaatcaccaacaccaaagaccaaaggtagataaatgcatgaagagaagaaaaaccagcacaaaaaggctgaaaattccaaaaaccagaatgcctcttctcctccaaaggatcacaacaccttgcccacaaaggaacaaaactggacagagaatgagtttgacgaattgacagaagtgggtaataacacttcataagacttcataaggtgggtaataacaaactcctccgagctaaaggggcatgttctaacccaatgtaaggaggctaagaaccatgaaaaaaggttagaggaattgctaactagaataaccagtttagagaagaatataaattacctgatggagctgaaaaacacagcacaagaacttcatgaagcatacacaagtatcaataccaaattgatcaagcggaaggaaggatatcagagattgaagatcaacttagtgaaataaagcatgaagacaaaattagagaaaaaagaataaaaaggaatgaacaaagcctccaagaaatatgggactatgtgaaaagaccaaacctatgtttgattggtctacatgaaagtgacatggagaatggaaccaagttggaaaactctcttcagaatattatccaggagaatttccccaatctagcaagacaggccaacattcaaattcaggaaatacagagaaaaccacaaacatattcctcgagaagagcaaccccaagaaacataatcatcagattcaccaaggttgaaatgaaggaaaaaatgttaagggcagccagagaaaaaggtcgggttaccctcaaagggaagcccatcagaccaacagc s panTro4.chr21 3777508 1548 + 32799110 agcacagcaatctgaatcaacctgggatgctcaaccttggtagggaaaggggcatctgccattactgaggcttgagtaggcagttttcccctcacagtgtaaacaaacccactgggaagttcaaactgagcagagcccaccacagctcagcaaagctgctgtagccacattgcctctctagattcctcctccctgggcagggaatctctgaaagaaaggcagcagcctcagtcaggggattctagataaaattcccatctcccctgggacagagtacctgggggaagaagtggctgtggggacagctttagcagacttaaatgtttctgcctgccagctctgaaaagagtagcagatctcccagggcagcactcaagctctgctaagaaactgactggctcctgaagtaagtccctgatccccatggcttctgactgggagacacctcccagcaggagtcgacagacacctcatacaagagagctccagctggcatctcgtgggtgcccctctgggacaaagcttccagaagaaggaacaggcagcaatctttgctgttctgctgcctccgctggtgatacccaggcaaacagggtctggagtggacctccagcaaaatccagcagacctgcagcacagggacctgactgttagaaggaaaactaacaaatggaaaggaatagcatcaatatcaacaaaatggatgtccacacagaaaccccatccgaaaatcaccaacatcaaagaccaaaggtagataaatccatgaagagaagaaaaaccagcacaaaaaggctgaaaattccaaaaaccagaatgcctcttctcctccaaaggatcacaacaccttgcccacaaaggaacaaaactggacagagaatgagtttgacgaattgacagaagtgggtaataacacttcataagacttcataaggtgggtaataacaaactcctccgagctaaaggggcatgttctaacccaatgtaaggaggctaagaaccatgaaaaaaggttagaggaactgctaactagaataacgagtttagagaagaatataaatgacctgatggagctgaaaaacacagcacaagaacttcatgaagcatacacaagtatcaataccaaattgatcaagcagaaggaaggatatcagagattgaagatcaacttagtgaaataaagcatgaagacaaaattagagaaaaaagaataaaaaggaatgaacaaagcctccaagaaatatgggactatgtgaaaagaccaaacctatgtttgattggtctacatgaaagtgacatggagaatggaaccaagttggaaaactctcttcagaatattatccaggagaatttccccaatctagcaagacaggccaacattcaaattcaggaaatacagagaaaaccacaaacatattcctcgagaagagcaaccccaagaaacataatcatcagattcaccaaggttgaaatgaaggaaaaaatgttaagggcagccagagaaaaaggtcgggttacccacaaagggaagcccatcagaccaacagc i panTro4.chr21 C 0 N 0