##maf version=1 scoring=roast.v3.3 a score=300.000000 s hg38.chr22_KI270876v1_alt 3 1 + 263666 C s nomLeu3.chr7b 100367592 1 - 115148730 c i nomLeu3.chr7b N 0 C 0 s chlSab2.chr19 18442247 1 + 33263144 c i chlSab2.chr19 N 0 I 1 a score=511.000000 s hg38.chr22_KI270876v1_alt 4 4 + 263666 ccca s nomLeu3.chr7b 100367593 4 - 115148730 ccca i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 80900325 3 - 96509753 ccc- i macFas5.chr10 N 0 C 0 s papAnu2.chr10 76175360 3 + 90941950 ccc- i papAnu2.chr10 N 0 C 0 s chlSab2.chr19 18442249 3 + 33263144 ccc- i chlSab2.chr19 I 1 C 0 a score=2260518.000000 s hg38.chr22_KI270876v1_alt 8 1274 + 263666 ccttggcctcccaaagtgctaggatcacagtcatgagccaccgtgcctggccTAGGACTCCTGTCtctctcaggtctgctttcctccacgtgggtttctttcccaggaatgacctttgtacaacatggaaaagatgaccatcagagatctagatttgccttgtcctttaactagcagccccagagggaagggcgtccatctttcctacctatttctcccacagaagtcctgggaatggctctGCCCAAAGC-ACCAGCATGGCAGAGGTTCTGCAGTTAGTGTCTGAGAGccttagtgtttcagcaatttttttcacagcttccctaggtcacagaa--------------------------------atactgaacagttcaattaccaagtggctaggtccaaaTGGTTTGTGAACCTCTGCAATC-----CACTCATGGGATAGGCCGGCTGAGTCAGGCACCCACCTCTGCAAAGGAGGTGCACCCACACTTCCAGGAAGAAAATTATGATGGGCAAAGTATAAAAGATATCCACCATTCCTCTGTCCTGATGGAACAGCCTTGGCAGGCCTGTGTCTGGTAGATATAAACAGAGTGTGCGCGTGTGATAGGTAGCATATGATCAGCAGAAGAGCTGGCCTGGGTCT-GGGGCTCTGTGGAGCGCATCTGGTTTATTTATAGGTTGCTCGTAACCCAACCTGGATCCTATTA---AGTAACCTGTAAAAACAAGCCACACCACCGAACATGGAGGTCCAAT-GCCGATTCATGACCCTGAGAGCTCCATCCTGAGGGGGCGGGCCCGGAACGTGAGTACTGCATTTGGAATGAGGGATGCGGAACCGTGGGAAGGGACAAATCAGTTGCATTTATCTTTCCT-TTTTTGCCCAAAAACCCAATAAACACACCTCTTCCTTGTTTAGTTCCTGTGCTCTGAGGGTGAATTGCAGCATGTCTAGAATGAAACTGAGCGGTTGTACTAAACTTGCTGCCTGGCACTGATGTTGCCCAAGGCAGGAAAGCCGGTGAATAGTGTCGCTTTGTAGGCAGGGGGGCAAGGAGGAGTTTGGCGTGGTTtgtaccaacttgtcagcattgtttattgataacagtaagactgattttctcctggtgagacccccagagagctgtgctgcagaagctagttatgtaacaggaatttgtgtatgtgacctgtgaaacataaaaaaccccagccgagactctcttttgggccccttagttctgtggtgctctgtgcacctgccaagggttctgta------tctgaaagaggaagtgcattttgccatgac s panTro4.chr22 34379658 1274 + 49737984 ccttggcctcccaaagtgctaggattacagtcatgagccactgtgcctggcctaggactcctgtctctctcaggtctgctttcctccacgtgggtttctttcccaggaatgacctttgtacaacatggaaaagatgaccatcagagatctagatttaccttgtccttaaactagcagccccagagggaagggcgtccatctttcctacctatttctcccacagaagtcctgggaatggctctGCCCAAAGC-ACCAGCATGGCAGAGGTTCTGCAGTTAGTGTCTGAGAGccttagtgtttcagcaatttttttcacagcttccctaggtcacagaa--------------------------------ataccgaacagttccattaccaagtggctgggtccaaaTGGTTTGTGAACCTCTGCAATC-----CACTCATGGGATAGGCCAGCTGAGTCAGGCACCCACCTCTGCAAAGGAGGTGCACCCATACTTCCAGGAAGAAAATTATGATGGGCAAAGTATAAAAGATATCCACCATTCCTCTGTCCTGATGGAACAGCCTTGGCAGGCCTGTGTCTGGTAGATATAAACAGAGTGTGCGCGTGTGATAGGTAGCAGATGATCAGCAGAAGGGCTGGCCTGGGTCT-GGGGCTCTGTGGAGCGCATCTGGTTTATTTATAGGAGGCTCGTAACCCAACCTGGATCCTATTA---CGTCACCTGTAAAAACAAGCCACACCACCGAAAATGGAGGCCCAAT-GCCGATTCATGACCCTGAGAGCTCCATCCTGAGGGGGCGGGCCCGGAACGTGAGTACTGCATTTGGAATGAGGGATGCGGAACCGTGGGAAGGGACAAATCAGTTGCATGTATCTTTCCT-TTTTTGCCCAAAAACCCAATAAACACACCTCTTCCTTGTTTAGTTCCTGTGCTCTGAGGGTGAATTGCAGCATGTCTAGAATGAAACTGAGCGGTTGTACTAAACTTGCTGCCTGGCACTGATGTTGGCCAAAGTGGGAAAGCCGATGAATAGTGTCGCTTTGTAGGCAGGGGGGCAAGGAGGAGTTTGGCGTGGTTTGTACCAACTTGTCAGCATTGTTTATTGATAACAGTAAGACtgattttctcctggtgagacccccagagagctgtgctgcagaagctagttatgtaacaggaatttgtgtatgtgacctgtgaaacataaaaaaccccagccgagactctcttttgggccccttagttctgtggtgctctgtgcacctgccaagggttctgta------tctgaaagaggaagtgcattttgccatgac i panTro4.chr22 N 0 C 0 s nomLeu3.chr7b 100367597 1273 - 115148730 ccttggcctcccaaagtgctaggattacagtcatgggccaccgcgcctggcctaggactcctgtctctctcaggtctgctttcctccgcgtgggtttctttcccaggaatgaccttggtacaatatggaaaagatggccatcagagatctagatttaacttgtccttaaactagcagccccagagggaagggcgtccatctttcctacctatttctcccacagaagtcctgggaatggctctGCCTAAAGCAACCAGCATGGCAGAGGTTCTCTAGTTAGTGTCTGAGAGccttagtgtttcagcaatttttttcacagcttccctaggtcacagaa--------------------------------ataccgaacagttcaattaccaagtggctaggcccaaaTGGTTTGTGAACCTCTGCAATC-----CAGTCATGGGATAGGCCGGCTGAGTCATGCACCCACCTCTGCAAAGGAGGTGCAGCCACACTTCCAGGAAGAAAATTATGATGGGCAAAGTATAAAAGATATCCACCATTCCTCTGTCCTGATGGAACAGCCTTGACAGGCCTGTGTCTGGCAGATATAAACAGAGTGTGCGTGTGTGATAGGTGGCAGATGATCAGCAGAAGACCTGGCCTGGGGCT-GGGGCTCTGTGGAGTGCATCTGGTTTATTTATAGGATGCTTGTACCCCAACCTGGAGCCTATTA---CATCACCTGTAAAAACAGGCCACGCCACCAAAAATGGAGGCCCAATAGCCGATTCATGAGCCCGAGAGCTCCATCTTGAGGGGGAGGGCCCGGGACATGAGTACTGCATTTGGAATGAGGGATGCAGAACTGTGGGAAGGGACAAATCAGTTGCATTTATCTTTCCTCCTTTTGCCCAAAAACCCAATAAACATGCCT----CTTGTTTAGTTCCTGTGCTCTGAGGGTGAATTGCAGCATGTCTAGAATGAAACTGAGCGGTTGTACTAAACTTGCTGCCTGACACTGATGTTGGCCAAGGCAGGAAAGCCGATGAATAGTGTCGCTTTGTAGGCAGGGGGCCAAGGAGGAGTTTGGCGTGGTTTGTACCAACTTGTCAGCATTGTTTACTGATAGCAGTACGACtgattttctcctggtgagacccccggagagctgtgctgcagaagctagttatgtaacaagaatttgtgtatgtgacctgtgaaacataaaaaaccccagcccagactctcttttgggccccttagttctgtagtgctctgtgcacctgccaagggttctgta------tctgaaagaggaagtgcattttgccatgag i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80487179 1322 + 95678458 ccttggcctcccaaagtgctaggattacagttgtgagccaccgcgcctggcctaggactcctgtctctctcaggtctgctttcgtccgcgtgggttcctttcctaggaatgacctttgtacatcatggaaaagatggccatcagagatctagatttaccttgtccttaaacttacagccccagagggaagggaatccatctttcctacctatttctcccacagaagtcctgggaatggctctGCCCAAAGCAACCAGCATGGcagaggttctccagttcgtgtctgagacccttagtgtttcagcaatttttttcacagcttccctaggtcaccaaatggtttggttaccaaatggtttggtccCTAGGTTACCAAACAGTTCAATTACCAAGTGGCTAGGCCCAAATGGTTTGTGAACCTCTGCAATCCTCTGCAGTCATGGGATAGGCCCACTGAGTCATGCACTCTCCTCCGCAAAGGAGGTGCAACCACACTTCCAGGAAGGTAATTATGATGGGCAAAGTATAAAAGATATCCACCATTCCCCTGTCCTGATGGAACAGCCTCGGCAGGCCTGTGTCTGGTAGACATAAACAGCGTGTGCGTGTGTGATAGGTAGCAGATGACCAGCAGAAGAGCTGGCCTGGGGCT-GGGGGTCTGTGGAACGCA-CTGGTTTATTTATAGGATGCTTGTACTCCAACCTGGAGCCTATGACATCGTCAACTGTTAAAACAAGCCACACTAGCAAAAATGGAGGCCCGAGAGCCAATGCGTGACCCCGAGAGCTCCATCCTGAGGGGGCAGGCCCGGGACGTGAGTTCTGCGTTTGGAGTGAGGGATGCGGAACTGTGGGAATGGATAAATCAGTTGCATTTATCTTTCCTCCTTTTGCCCAAAAACCCAGTAAACACACCTCTTCCTTGTTTAGTTCCCGTGCTCTGAGCGTGAATTGCAGCACGCCTAGAATGAAACTGAGCGGTTGTACTAAACTTCCTGCCTGGCACGGAGGATGGCCAAGGCAGGAAAGCCGATGAATAGTGTCGCTTTGTAGGCAGGGGGCCAAGAAGGAGTTTGGCGTGGTTTGTACCAACTTGTCAGCGTTGTTTATTGATAACAGTGAGACtgatttgctcctggtgagacccccagagagatgtgctgcagaagctagttatgtaacaggaatttctgtatgtgacccgtgaaacataaaaaaccccagccgagactctcttttgggccccttggttgtgtggtgctctgtgcacctgccaagggttctgtaaagggttctgaaagaggaagtgcattttgccatgac i rheMac3.chr10 N 0 C 0 s macFas5.chr10 80900328 1322 - 96509753 ctttggcctcccaaagtgctaggattacagttgtgagccaccgcgcctggcctaggactcctgtctctctcaggtctgctttcgtccgcgtgggttcctttcctaggaatgacctttgtacatcatggaaaagatggccatcagagatctagatttaccttgtccttaaacttacagccccagagggaagggaatccatctttcctacctatttctcccacagaagtcctgggaatggctctGCCCAAAGCAACCAGCATGGCAGAGGTTCTCCAGTTCGTGTCTGAGAcccttagtgtttcagcaatttttttcacagcttccctaggtcaccaaatggtttggttaccaaatggtttggtccCTAGGTTACCAAACAGTTCAATTACCAAGTGGCTAGGCCCAAATGGTTTGTGAACCTCTGCAATCCTCTGCAGTCATGGGATAGGCCCACTGAGTCATGCACTCTCCTCCGCAAAGGAGGTGCAACCACACTTCCAGGAAGGTAATTATGATGGGCAAAGTATAAAAGATATCCACCATTCCCCTGTCCTGATGGAACAGCCTCGGCAGGCCTGTGTCTGGTAGATATAAACAGAGTGTGCGTGTGTGATAGGTAGCAGATGACCAGCAGAAGAGCTGGCCTGGGGCT-GGGGGTCTGTGGAACGCG-CTGGTTTATTTATAGGATGCTTGTACCCCAACCTGGAGCCTATGACATCGTCAACTGTTAAAACAAGCCACACTAGCAAAAATGGAGGCCCGAGAGCCAATGCGTGACCCCGAGAACTCCATCCTGAGGGGGCAGGCCCGGGACGTGAGTTCTGCGTTTGGAGTGAGGGATGCGGAACTGTGGGAATGGATAAATCAGTTGCATTTATCTTTCCTCCTTTTGCCCAAAAACCCAATAAACACACCTCTTCCTTGTTTAGTTCCCGTGCTCTGAGCGTGAATTGCAGCACGCCTAGAATGAAACTGAGCGGTTGTACTAAACTTCCTGCCTGGCACGGAGGATGGCCAAGGCAGGAAAGCCGATGAATAGTGTCGCTTTGTAGGCAGGGGGCCAAGAAGGAGTTTGGCGTGGTTTGTACCAACTTGTCAGCGTTGTTTATTGATAACAGTGAGACtgatttgctcctggtgagacccccagagagatgtgctgcagaagctagttatgtaacaggaatttctgtatgtgacccgtgaaacataaaaaaccccagccgagactctcttttgggccccttggttgtgtggtgctctgtgcacctgccaagggttctgtaaagggttctgaaagaggaagtgcattttgccatgac i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76175363 1322 + 90941950 ccttggcctcccaaagtgctaggattacagttgtgagccaccgcgcctggcctaggaCTCCTGTCTCTCTCAGGTCTGCTTTCGTCCGCGTGGGTTCCTTTCCTAGGAATGACCTTTGTACATCATGGAAAAGATGGCCATCAGAGATCTAGATTTACCTTGTCCTTAAACTAACAGGCCCAGAGGGAAGGGAATCCATCTTTCCTACCTATTTCTCCCGCAGAAGTCCTGGGAATGGCTCTGCCCAAAGCAACCAGCATGGCAGAGGTTCTCCAGTTAGTGTCTGAGACCCTTAGtgtttcagcaattttttttacAGCTTCCCTAGGTCACCAAATGGTTTGGTTACCAAATGGTTTGGTCCCTAGGTTACCAAACAGTTCAATTACCAAGTGGCTAGGCCCAAATGGTTTGTGAACCTCTGCAATCCTCTGCAGTCACGGGATAGGCCAACTGAGTCATGCACTCTCCTCTGCAAAGGAGGTGCAGCCACACTTCCAGGAAGAAAATTATGATGGGCAAAGTATAAAAGATATCCACCATTCCTCTGTCCTGATGGAACAGCCTCGGCAGGTCTGTGTCTGGTAGATATAAACAGAGTGTGCGTGTGTGATAGGTAGCAGATGACCAGCAGAAGAgctggcctggggct-gggggtgtgtGGAACGCA-CTGGTTTATTTATAGGATGCTTGTACCCCAACCTGGAGCCTATGACGTCGTCAACTGTTAAAACAAGCCACACTAGCAAAAATAGAGGCCTGAGAGCCAATTCATGACCCCGAGAGCTCCATCCTGAGGGGGCAGGCCCGGGATGTGAGTTCTGCGTTTGGAGTGAGGGATGCGGAACTGTGGGAATGGATAAATCAGTTGCATTTATCTTTCCTCCTTTTGCCCAAAAACCCAATAAACACATCTCTTCCTTGTTTAGTTCCTGTGCTCTGAGCGTGAATTGCAGCACGCCTAGAATGAAACTGAGTGGTTGTACTAAACTTCCTGCCTGGCACGGATGATGGCCAAGGCAGGAAAGCCGATGAATAGTGTCGCTTTGTAGGCAGGAGGCCAAGAAGGAGTTTGGCGTGGTTTGTACCAACTTGTCAGCATTGTTTATTGATAACAGTGAGACTGATTTGCTCCTGGTGAGACCCCCAGAGAGATGTGCTGCAGAAGCTAGTTATGTAACAGGAATTTCTGTATGTGACCCGTGAAACATAAAAAACCCCAGCCGAGACTCTCTTTTGGGCCCCTTGGTTGTGTGGTGCTCTGTGCACCTGCCAAGGGTTCTGTAAAGGGTTCTGAAAGAGGAAGTGCATTTTGCCATGAC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18442252 1293 + 33263144 ccttggcctcccaaagtgctaggattacagttgtgagccactgcgcctggcctaggactcctgtctctctcaggtctgctttcatccgcgtgggttcctttcctaggaatgacctttgtacatcatggaaaagatggccatcagatatctagatttaccttgtccttaaactaacagccccagagggaagggaatccatctttcctacctatttctcccacagaagtcctgggaatggctctGCCCAAAGCAACCAGCATGGCAGAGGTTCTCCAGTTAGTGTCTGAGAcccttagtgtttcagcaatttttttcacagcttccctaggtcaccaaatggtttggttactaaatggtgtggtccctaggttaccaaacagttcaatTACCAAGTGGCTAGGCCCAAATGGTTTGTGAACCTCTGCAATCCTCTGCAGTCACGGGATAGGCCCACTGGGTCATGTACTCTCCTCCGCAAAGGAGGTGCAGCCACACTTCCAGGTAGAAAATTATGATGGGCAAAGTATAAAAGATATCCACCATTCCTCTGTCCTGATGGAACAGCCTCGGCAGGCCTATGTCTGGTAGATATAAACAGAGTGTGCGTGTGTGATAGGTAGCAGATGACCAGCAGAAGAGCTGGCCTGGGGCTGGGGGGTCTGTGGAACGCA-CTGGTTTATTTATAGGATGCTTGTACCCCAACCTGGAGCCTATGACGTCGTCAACTGTTAAAACAAGCCACACTAGCAAAAATGGAGGCCCGAGAGCCAATTCATGACCCCGAGAGCT------------------CCCGGGATGTGAGTTCTGCTTTTGGAGTGAGGGATGCGGAACTGTGGGAATGGATAAATCAGTTGCATTTATCTTTCCTCCTTTTGCCCAAAAACCCAATAAACACACCTCTTCCTTGTTTAGTTCCTGCGCTCTGAGCGTGAATTGCAGCATGCCTAGAATGAAACTGAGCGGTTGTACTAAACTTCCTGCCTGGCACGGATGATGGCCAAGGCAGGAAAGCCGATGAATAGTGTCGCTTTGTAGGCAGGAGGCCAAGAAGGAGTTTGGCGTGGTTTGTACCAACTTGTCAGCGTTGTTTATTGATAACAGTGAGACtgatttgctcctggtgagacccccggagagatgtgctgcagaagctagttatgtaacaggaatttctgtatgtgacccgtgaaacataaaaaaccccagctgagactctcttttgggccccttgtttctgtggtgctctgtgcatctgcc------------aagcgttctgaaagaggaagtgcattttgccatgac i chlSab2.chr19 C 0 I 304 a score=-395.000000 s hg38.chr22_KI270876v1_alt 1282 2 + 263666 ca s panTro4.chr22 34380932 2 + 49737984 ca i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100368870 2 - 115148730 ca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80488501 2 + 95678458 cA i rheMac3.chr10 C 0 I 601 s macFas5.chr10 80901650 1 - 96509753 c- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76176685 2 + 90941950 TA i papAnu2.chr10 C 0 C 0 e chlSab2.chr19 18443545 304 + 33263144 I a score=22714.000000 s hg38.chr22_KI270876v1_alt 1284 79 + 263666 tacagtagagaggacaatagaaacccaaaccggccctgccagaccccttgctgtgagctggccatagctgtgatgcac-a s panTro4.chr22 34380934 79 + 49737984 tacagtagagaggacaatagaaacccaaaccggccctgccagaccccttgctgtgagctggccatagctgtgatgcac-a i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100368872 79 - 115148730 tacagtagagaggacaatagaaacccaaaccggccctgccagaccccttgctgtgagctggccatagctgtgttgcac-a i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 80901651 40 - 96509753 ---------------------------AGCTGGCCATA-----------GCTGTGATTCGGCCATAGCTGTGATCCTt-- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76176687 30 + 90941950 -------------------------------------------------GCTGTGATTCGGCCATAGCTGtgattctct- i papAnu2.chr10 C 0 I 278 e rheMac3.chr10 80488503 601 + 95678458 I e chlSab2.chr19 18443545 304 + 33263144 I a score=6550.000000 s hg38.chr22_KI270876v1_alt 1363 7 + 263666 tcttctt s panTro4.chr22 34381013 7 + 49737984 tcttctt i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100368951 7 - 115148730 tcttctt i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 80901691 7 - 96509753 tcttctt i macFas5.chr10 C 0 I 551 s papAnu2.chr10 76176995 7 + 90941950 tcttctt i papAnu2.chr10 I 278 I 1 e rheMac3.chr10 80488503 601 + 95678458 I e chlSab2.chr19 18443545 304 + 33263144 I a score=1552.000000 s hg38.chr22_KI270876v1_alt 1370 16 + 263666 c-----ttttttttttctttg s panTro4.chr22 34381020 21 + 49737984 cttcttttttttttttttttg i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100368958 9 - 115148730 t------------tttttttg i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 80902249 16 - 96509753 ----cttcttcttctttttt- i macFas5.chr10 I 551 C 0 s papAnu2.chr10 76177003 16 + 90941950 ----cttcttcttctttttt- i papAnu2.chr10 I 1 C 0 e rheMac3.chr10 80488503 601 + 95678458 I e chlSab2.chr19 18443545 304 + 33263144 I a score=2530090.000000 s hg38.chr22_KI270876v1_alt 1386 1431 + 263666 gtctctgttgcacagtggagtccagtggcatgatcatatctcattgacgcctccaactcttaggtttaagcgtcctcccacctcagcctcctgggtagctaggactacaggggtgtgccaccacacctagtt----tttgtttgt-ttg-tttgttttgttttgttttgtttttcttgagacagagtcttcctctgtcacccaggctggagtgcaatggcatgatctcagctcacggaaacctctgccgcctgggttcaagcaattctcctgcctcagcctcccaagtagctgggattgcaggtgtgcaccaccacacccagctaattttttgtattcttagtagagatggggtttcatcacgtatgccaggctggtctcaaactcctgacctcaggtgatccacctgcctcagcctcctaaagtgctgggattacaggcgtgagccactgcactcagcccaggcctagttaatttttaaattttttgtagcaatgggaatctcattctgttgctcaggctggtctcgaactcctggtctcaagcaatcctcccacctcagctccccaaagtgctgagattacaggtatgcaccaccatgccctgcacacatcctgactttaatgttagctgtagagtgctcctttctcttcaagaatctatagatttgtaagcactgtcatttggagccctataaatcattagcaataaatcctgtaactggcactcttagtgcaGTCCCTAAGGTTAAAATGACTCGATTCTGTCTAATTGGGCTGAGAAGGACATAGATGTGTTAGTCTCTAGTTTCTCAAGCTAATCCACATGCCATTCTGCTGATAGAGGATTCGCATTCAAAATATCTATAGATATTGCCAGATTCTcatgtctatcagtaacgtgtggacaggccttttgcactacactgtcatcaaaattcgaggtgctcaatcatttgcatttttgccgtctgagaggtgaaacatTTGATGTCATTGCCTGCACTTGTACTTGGCAAAATCAAGCATGCCAGGAAGGGAGTGTAGCTTGCCTATCTCCCTTGGTTTCCTGAGGAGGTTGCCAGAAGTGTAGTGCTCTCAGCAGCCCCTACGGAGTGAAGAATCCATTATTTCAGAGGAGATCAGAGCAAGCCAGAACTTGTGG-TTTTACAATATTTTAGTTTGGGGTCAAGGGTTGATCGGCATTCAAGATTCATTCTTGggctgggtgcagtggctcacacctgtaatcccagcactttgggaggctgag-gg-gggtggatcacttgaggtcaagagttcaagaccagcctgaccaacatggtgaaaccctatctctaccaaaaatataaaaacattagccgagtgtggtggtgtgtgcctgtaatcccaaatacttgggaggctaaagcaggagaatcacttgaacccgggaggcg s panTro4.chr22 34381041 1436 + 49737984 gtctctgttgcacagtggagtccagtggcatgatcatatctcattgacgcctccaactcttaggtttaagtgtcctcccacctcagcctcctgggtagctaggactaaagttgtgtgccaccacacttagtttttgtttgtttgt-ttg-tttgttttgttttgttttgtttttcttgagacagagtcttcctctgtcacccaggctggagtgcaatggcatgatctccgctcacggaaacctctgccccctggattcaagcaattctcctgcctcagcctcccaagtagctgggattacaggtgtgcaccaccacacccagctgattttttgtattcttagtagagacggggtttcaccacgtatgccaggctggtctcaaactcctgacctcaggtgatccacctgcctcagcctcctaaagtgctgggattacaggcgtgagccactgcactcagcccaggcctagttaatttttaaattttttgtagcaatgggaatctcattctgttgctcaggctggtctcgaactcctggtctcaagcaatcctcctacctcagccccccaaagtgctgggattacaggtatgcaccaccatgccctgcacacatcctgactttaatgttagctgtacagtgctcctttctcttcaagaatctatagatttgtaagcactgtcatttggagccctataaatcattagcaataaatcctgtaactggcactcttagtgcaGTCCCTAAGGTTAAAATGACTCGATTCTGTCTAATTGGGCTGAGAAGGACATAGATGTGTTAGTCTCTAGTTTCTCAAGCTAATCCAGATGCCATTCtgctgatagaggattcgcattcaaaatgtctatagatattgccagactctgatgtctaccagtaacgtgtggacaggccttttgcactacactgtcatcaaaattcgaggtactcaatcatttacatttttgccatctgagaggtgaaacatTTGATGTCACTGCCTGCAATTGTACTTGGCAAAATCAAGCATGCCAGGAAGGGAGTGCAGCTTGCCTATCTCCCTTGGTTTCCTGAGGAGGTTGCCTGAAGTGTAGTGCTCTCAGCAGCCCCTACGGAGTGAAGAATGCATTATTTCAGAGGAGATCAGAGCAAGCCAGAACTTGTGGCTTTTACAATATTTTAGTTTGGGGTCAAGGGTTGATCGGCATTCAAGATTCATTCTTGggctgggtgcagtggctcacacctgtaatcccagcactttgggaggctgat-gg-gggtggatcacttgaggtcaagagttcaagaccagcctgaccaacatggtgaaaccctatctctactaaaaatataaaaacattagccgagtgtggtggtgtgtgcctgtaatcccaaatacttgggaggctaaagcaggagaatcacttgaacccgggaggcg i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100368967 1434 - 115148730 gtctctcttgcacagtggagtccagtggcatgatcatatctcattgaagcctccaactcttaggtttaagcgtcctcccacctcagcctcctgggtagccaggactacaggtgtgtgccaccacaactagtt----tttgtttgt-ttgttttgttttgttttgttttgttttTCttgagacagagtcttgctctgtcacccaggctggagtgcaatggcatgatctcagctcacagaaacctctgcccccagggttcaagcaattctcctgcctcagcctcccaagtagctgggattagaggtgtgcaccaccacacccagctaattttttgtattcttagtagagacagggtttcaccacgtaggccaggctggtctcaaactcctgacctcaggtgatccacctgcctcagcctcctaaagtgctggcattacaggtgtgagccactgcacccagctcaggcctagttaatttttaaattttttgtagcaatgggaatctcattgtgtcgctcaggctggtctcgaactcctggtctcaagcaatcctcccacctcagccccccaaagtgctgggactgcaggtgttcaccaccatgccctgcacacatcctgactttaatgttagctgtacagtgctcctttctcttcaagaatctatagatttgtaagcactgtcatttggagccctataagtcattagcaataaatcctgtaactggcactcttagtgcaGTCCCTAAGGTTAAAATGACTCGATTCTGTCTAATTGGGCTGAAAAAGACATAGATGTGTTAGTCTCTAGTTTCTCAAGCTAATCCAGATGCCATTCTGCTGATAGAGGGTTCGCAttcaaaatgtctatagatattgccagattctcatttctgccagtagcgtgtggacaggcctcttgcactacactgtcatcaaaattcgaggtactcaatcatttgcatttttgccatctgagaggtgaaacatttgatgtcattgCCTGCACTTGCACTTGGCAAAATCAATCATGCCAGGAAGGGAATGTAGCTTGCCTATCTCCCTTGGTTTCCTGAGGAGGTTGCCTGAAGTATGGTGCTCTCAGCAGCCCCTACGGAGTGAAGAATGCATTATTACAGAGGAGATCAGAGCAAGCCAGAACTTGTGGCTTTCACAGTATTTTAGTTTGGGGTCAAGGGTTGATCGGCATTCAAGATTCATTCTTGggctgggcgcggtggctcacacctgtaatcccagcactttgggaggctgag-ggtgggtggatcacttgaagtcaagagttcaagaccagcgtgaccaacatggtgaaaccctatctctaccaaaaatataaaaacattagccgaatgtggtggtgcacacctgtaatcccagctacttgggaggctaaagcaggataatcacttgaacccaggaggcg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80489104 1394 + 95678458 gtctctgttgcacagtggagtccagtggcttgatcatatctcattgaagcctccaactcttaggtttaagtgtcctcccacctcagcctcctgggtagccaggactacaggtgtgtgccaccacacctagtt----tttgttgttgttg-tttgtt-------------tttttctcgggacagagtcttgctctgtcacccaagctggagtgcaatggcatgatctcagctcacggcaacctctgcctcctgggttcaagcaattctcctgcctcagcctcctgagtagctgtgattacaggtgcgcaccaccacacccagctaatttttggtatttttagtagagacggggtttcaccacgttggccaggctggtctcaaactcctgacctcaggtgatccacctgcctcagcctcctaaaatgctggaattacaggcgtaagccactgcacccagcccaggcctagttaatttttaaattttttgtagcgatgggaatctcattgtgttgctcagactggtctcgaactcctggtctcaagcaatcctcccacctcagcccctcaaagtgctgggattacaagtgtgtaccaccgtgccctgcAcacatcctgactttaatgttagctgtacagtgctcctttcccttcaagaatctatagatttgtaagcattgtcatttggagccctgtaagttattagcaataaatcctgtaactgctactcttagtgcaGTCCCTAAGG-TAAAATGACTCGATTCTGTCTAATTGGGCTGAAAAGGACATAGATGTGTTAGTCTTTAGTTTCTCAAGCTAATCCAGTTGCCATTCTGCTGACAGAGgattcacattcaaaatgtctatagatattgccagattctcatttctaccagtagtgtatgggcaggccttttgcagtacactgtcatcaaaattcgaggtactcaatcatttgcatttttgccatctgagaggtgaaacatttgatgtcattgCCTGCACGTGTACTTGGCAAAATCAAGGATGCCAGGAAGGGGATGTAGCTTGCCTATCTCTCTTGGTTTCCTGAGGAGGTTGCCTGAAGTATGGTGCTCTCAGCAGACCCTATGGAGTGAAGAATGCATTATTTCAGAGGAGATCAGAGCAAGCCAGAACTTGTGGCTTTTACAGTATTTTAGTTTGGGGTCAAGGGTTGATTGGCATTCAAGATTCATTCTTGggccgggagtggtggctcacacctgtcatcccagcactttgggaggctgagtgg-gggtggatctcttgagctcaagagttcacgaccagcctgaccaacatggtgaaaccccatctctaccaaaaatataaaaatattagtcaagtgtggtggtgt--------------------------ggctaaagcaggagaatcacttgaacccgggaggcg i rheMac3.chr10 I 601 C 0 s macFas5.chr10 80902265 1394 - 96509753 gtctctgttgcacagtggagtccagtggcttgatcatatctcattgaagcctccaactcttaggtttaagtgtcctcccacctcagcctcctgggtagccaggactacaggtgtgtgccaccacacctagtt----tttgttgttgttg-tttgtt-------------tttttctcgggacagagtcttgctctgtcacccaagctggagtgcaatggcatgatctcagctcacggcaacctctgcctcctgggttcaagcaattctcctgcctcagcctcctgagtagctgtgattacaggtgcgcaccaccacacccagctaatttttggtatttttagtagagacggggtttcaccacgttggccaggctggtctcaaactcctgacctcaggtgatccacctgcctcagcctcctaaaatgctggaattacaggcgtaagccactgcacccagcccaggcctagttaatttttaaattttttgtagcgatgggaatctcattgtgttgctcagactggtctcgaactcctggtctcaagcaatcctcccacctcagcccctcaaagtgctgggattacaagtgtgcaccaccgtgccctgcAcacatcctgactttaatgttagctgtacagtgctcctttcccttcaagaatctatagatttgtaagcattgtcatttggagccctgtaagttattagcaataaatcctgtaactgctactcttagtgcaGTCCCTAAGG-TAAAATGACTCGATTCTGTCTAATTGGGCTGAAAAGGACATAGATGTGTTAGTCTTTAGTTTCTCAAGCTAACCCAGTTGCCATTCTGCTGACAGAGgattcacattcaaaatgtctatagatattgccagattctcatttctaccagtagtgtatgggcaggccttttgcagtacactgtcatcaaaattcgaggtactcaatcatttgcatttttgccatctgagaggtgaaacatttgatgtcattgCCTGCACGTGTACTTGGCAAAATCAAGGATGCCAGGAAGGGGATGTAGCTTGCCTATCTCTCTTGGTTTCCTGAGGAGGTTGCCTGAAGTATGGTGCTCTCAGCAGACCCTATGGAGTGAAGAATGCATTATTTCAGAGGAGATCAGAGCAAGCCAGAACTTGTGGCTTTTACAGTATTTTAGTTTGGGGTCAAGGGTTGATTGGCATTCAAGATTCATTCTTGggccgggagtggtggctcacacctgtcatcccagcactttgggaggctgagtgg-gggtggatctcttgagctcaagagttcacgaccagcctgaccaacatggtgaaaccccatctctaccaaaaatataaaaatattagtcaagtgtggtggtgt--------------------------ggctaaagcaggagaatcacttgaacccgggaggcg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76177019 1393 + 90941950 gtctctGTTGCACAGTGGAGTCCAGTGGCTTGATCATATCTCATTGAAGCCTCCAACTCTTAGGTTTAagcgtcctcccacctcagcctcctgggtagccaggactacaggtgtgtgccaccacacctagtt----tttgttgttgttg-tttgtt-------------tttttcgcgggacagagtcttgctctgtcacccaagctggagtgcaatggcatgatctcagctcacggcaacctctgcctcctgggttcaagcaattctcctgcctcagcctcccgagtagctgtgattacaggtgcgcaccaccacacccagctaatttttggtatttttagtagagatggggtttcaccacgttggccaggctggtctcaaactcctgacctcaggtgatccacctgcctcagcctcctaaaatgctggaattacaggcgtaagccactgcacccagcccaggcctagttaatttttaaattttttgtagcgatgggaaTCTCAttgtgttgctcagactggtctcgaactcctggtctcaagcaatcctcccacctcagccccccaaagtgctgggattacaagcgtgcaccaccgtgccctgcACACATCGTGACTTTAATGTTAGCTGTACAGTGCtcctttcccttcaagaatctATAGATTTGTAAGCATTGTCATTTGGAGCCCTGTAAGTTATTAGCAATAAATCCTGTAACTGCTACTCTTAGTGCAGTCCCTAAGG-TAAAATGACTCGATTCTGTCTAATTGGGCTGAAAAGGACATAGATGTGTTAGTCTTTAGTTTCTCAAGCTAATCCAGTTGCCATTCTGCTGACAGAGTATTCACATTCAAAATGTCTATAGATATTGCCAGATTCTTATTTCTACCAGTAGTGTGTGGACAGACCTTTTGCAGTACACTGTCATCAAAATTCGAGGTACTCAATCATTTGCATTTTTGCCATCTGAGAGGTGAAACATTTGATGTCATTGCCTGCATTTGTACTTGGCAAAATCAAGGATGCCAGGAAGGGGATGTAGCTTGCCTATCTCTCTTGGTTTCCTGAGGAGGTTGCCTGAAGTATGGTGCTCTTGGCAGCCCCCATGGAGTGAGGAATGCATTATTTCAGAGGCGATAAGAGCAAGCCAGAACTTGTGGCTTTTACAGTATTTTAGTTTGGAGTCAAGGGTTGATCGGCATTCAAGATTCATTCttgggccgggagcggtggctcacacctgtcatcccaacactttgggaggctgag-gg-gggtggatctcttgagctcaagagttcacgaccagcctgaccaacatggtgaaaccccatctctaccaaaaatataaaaatattagtcaagtgtggtggtgt--------------------------ggctaaagcaggagaatcacttgaacccgggaggcg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18443849 1391 + 33263144 GTctctgttgcacagtggagtccagtggcatgatcatatctcattgaagcctccaactcttaggtttaagcgtcctcccaccccagcctcctaggtagccaggactacaggtgtgtgccaccacacctagtt----tt--tttttgttg-tttgtt-------------tttttctcgggacagagtcttgctctgtcacccaagctggagtgcaatggcatgatctcagctcacggcaacctccgcctcctgggttcaagcaattctcctgcctcagcctcccaagtagctgggattataggtgtgcaccaccacacccaactaatttttggtatttttagtagagacggggtttcaccacgttggccaggctggtctcaaactcctgacctcaggtgatccacctgccttggcctcctaaaatgctggaattacaggcgtaagccactgcacccagcccaggcctagttaatttttaaattttttgtagcgatgggaatctcattgtgttgctcagactggtctcgatctcctggtctcaagcaatcctcccacctcagccccccaaagtgctgggattacaagcgtgcaccaccgtgccctgcAcacatcctgactttaatgttagatgtacagtgctcctttcccttcaagaatctatagatctgtaagcattgtcatttggagccccgtaagtcattagcaataaatcctgtaactgctactcttagtgcaGTCCCTAAGG-TAAAATGACTCGATTCTGTCTAATTGGGCTGAAAAGGACATAGATGTGTTAGTCTTTAGTTTCTCAAGCTAATCCAGTTGCCATTCTGCTGACAGAGGATTCACAttcaaaatgtctatagatattgccagattctcatttctaccagtagtgtatggacagaccttttgcagtacactgtcatcaaaattcgaggtactcaatcatttgcatttttgccatctgagaggtgaaacatTTGATGTCGTTGCCTGCACTTGTACTTGGCAAAATCAAGGATGCCAGGAAGGGGATGTAGCTTGCCTATCTCTCTTGGTTTCCTGAGGAGGTTGCCTGAAGTATGGTGCTCTCGGCAGCCCCTATGGAGTGAAGAATGCATTATTTCAGAGGCGATAAGAGCAAGCCAGAACTTGTGGCTTTTACAGTATTTTAGTTTAGAGTCAAGGGTTGATCGGCATTCAAGATTCATTCTTGggccgggagcggtggctcacacctgtcatcccagcactttgggaggctgag-gg-gggtggatctcttgagctcaagagttcatgaccagcctgaccaacatggtgaaaccccatctctaccaaaaatataaaaatattagtcaagtgtggtggtgt--------------------------ggctaaagcaggagaatcacttgaacccgggaggcg i chlSab2.chr19 I 304 C 0 a score=149719.000000 s hg38.chr22_KI270876v1_alt 2817 67 + 263666 gaggttgcagtgagccaagatcacgccactgcactccaacctgagtgacagagcgagactccatctc s panTro4.chr22 34382477 67 + 49737984 gaggttgcagtgagccaagatcacgccactgcactccaacctgagggacagagcgagactccatctc i panTro4.chr22 C 0 I 3 s ponAbe2.chr22 30800277 65 + 46535552 gaggttgcagtgagccaagatcacgcca-tgcactccaacttgagtg-cagagcgagactctgtctc i ponAbe2.chr22 N 0 I 11 s nomLeu3.chr7b 100370401 67 - 115148730 gaggttgcagtgagccaagatcacaccactgcactgcaacctgagtgacagagtgagactccgtttc i nomLeu3.chr7b C 0 I 2 s rheMac3.chr10 80490498 67 + 95678458 gagggtgcagtgagacaagatcacgtcactgcactccagcctgagtgacagagcgagactctgtctc i rheMac3.chr10 C 0 I 231 s macFas5.chr10 80903659 67 - 96509753 gagggtgcagtgagacaagatcacgtcactgcactccagcctgagtgacagagcgagactctgtctc i macFas5.chr10 C 0 I 10 s papAnu2.chr10 76178412 67 + 90941950 gagggtgcagtgaggcaagatcacatcactgcactccagcctgagtgacagagcaagactctgtctc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18445240 67 + 33263144 gagggtgcagtgagacaagatcacatcactgcactccagcctgagtgacagagcgagactctgtctc i chlSab2.chr19 C 0 I 8 a score=1341450.000000 s hg38.chr22_KI270876v1_alt 2884 674 + 263666 aaaaaaaaaaaaaaGATTCGTTCTTGTGACATATAAGGGAATGCTTCTATATCACAGGTACATCCCA----------CCACATCCCACTACTTACTGCACCATCGCACCCACTTGAGGTTTCAGTGCAGCAAGCCTGACCATGCCCTACCACACCTCACAccttttcagatctgtggtccattttctttctgtctgcctatacttttcttgttaatttgt----agacactctttacatatgatgcatattaacccacggtctgtcacatgtactgcaaatatattcttcagtcagtcatttgccattttactttccttgtagtttttttttttttctattcagagttttaaaatgtgacat----agacattttcctttaggtacctggatttcatgccatgctaagaaaggcctttattcatccaacattataaaaatgtcctacattttcttctggtattttatacttttatgttttatgttAtcaaataagaaaggatgctatttgttatatagtatcatgttatgtttgtatagctatatgttattaatataagtgttccagaaattgtatgaaattcctagaaatctgatatatcctggtataatgttatcagctttaattcca---gttatcttaaaatgtcatataccgcatgaataactaaattttcttatgaaaattcagatgaa s panTro4.chr22 34382547 672 + 49737984 aaaaaaaaaaaaaaGATTCGTTCTTGTGACATATAAGGGAATGCTTCTATATCACAGGTACATCCCA----------CCACATCCCACTACTTACTGCACCATCGCACCCACTTGAGGTTTCAGTGCAGCAAGCCTGGCCGTGCCCTACCACACCTCACAccttttcagatctgtggtccattttctttctgtctgcctatacttttcttgttaatttgt----agacactctttacatatgatgcatattaacccatggtctgtcacatgtactgcaaatgtattcttcagtcagtcatttgccattttactttccttgtag--tttttttttttctattcagagttttaaaatgtgacat----agacattttcctttaggtacctggatttcatgccatgctaagaaaggcctttattcatccaacattataaaaatgtcctacattttcttctggtattttatacttttatgttttatgttAtcaaataagaaaggatgctatttgttatgcagtatcatgttatgtttgtatagatatatgttattaatataagtcttccagaaattgtatgaaattcctagaaatctgatatgtcctggtataatgttatcagctttaattcca---gttatcttaaaatgtcatataccgcatgaataactaaattttcttatgaaaattcagatgaa i panTro4.chr22 I 3 C 0 s ponAbe2.chr22 30800353 677 + 46535552 aaaaaaagaaaaaaagaTCG-TCTTGTGACATGTAAGGGAATGCTTCTATATCACAGGTACATCCCAC---------CCACATCCCACTACTTACTGCACCATTGCACCCACTTGAGGTTTCAGTGCAGGAAGCCTGGCCATGCCCTACCACACCTCACAccttttcagatctgtggtccattttctttctgtctgcctatacttttcttgttaatttgt----agacactctttacatatgatgcatattaacccatggtctgtcacatgtactgcaaatatattcttcagtcagtcatttgccattttgctttccttgtag-ttttttttttttctattcagagttttaaaatgtgacatcatcagacattttcctttaggtacctggatttcatgccatgctaagaaagacctttattcatccaacattataaaaatgtcctacattttcttctggtattttatacttttatgttttatgttAtcaaataagaaaggatgctatttgttgtgtagtatcatattatgtttgtatagatatatgttattaatataagtgttccagaaattgtatgaaattcttagaaatctgatatgtcctggtataatgttatcagttctaattcca---gttatcttaaaatgtcatgtaccacatgaataactaaattttcttatgaaaattcagatgaa i ponAbe2.chr22 I 11 C 0 s nomLeu3.chr7b 100370470 689 - 115148730 aaaaaaaaaaaaaaGATTCATTCTTGCGACATGTAAGGGAATGCTTCTATATCACGGGTacatcccaccacatcccaccacatcccacTACTTACTGCACCATCGCACCCACTCGAGGTTTCAGTGCAGCAAGCCTGGCCATGCCCTGCCACACCTCACAccttttcaaatctgtggtccattttctt----tctgcctatacttttcttgttaatttgtagacagacacactttacatatgatgcat-ttaacccatggtctgtcacatgtactgcaaatatattcttcagtcagtcatttgccattttactttccttgtag-ttttttttttttctattcagagttttaaaatgtgacatagtcagacattttcctttaggtacctggatttcatgccatgctaagaaaggcctttattcatctaacattataaaaatgtcctacattttcttctggtattttagacttttatgttttatgttAtcaaataagaaaggatgctatttgttacatagtatcatgttatgtttgtatagatatgtgttattaatataagtgttccagaaattgtatgaaattcctagaaatctgatatgtcctggtataatgttatcagctctaattccagttgttatcttgaaatgtcatataccacatgaataactaaattttcttacgaaaattcaaatgaa i nomLeu3.chr7b I 2 C 0 s rheMac3.chr10 80490796 575 + 95678458 aaaaaaaaaaaaaaGATTCATTCCTGTGACATGTAAGGGAATGCTTCTATATCACAGGTACATCCCA----------CCACATCCCACTACTTACTGTACCATCACACCCACTTGAGGTTTCAGTGCAGCAAGCCTGGCCGTGCCCTACCATACCTCACAccttttcagatctgtggtccattttctttctgtctgcctatactttt-ttcttaatttgt----agacactct----------tgcatattaacctgtggtctgtcacatgtactgcaaatatattcttcagtcagtcatttgccatttaactttccttgtcg-tttattttTT---------------------------------------------------------------------------------------------ACATTATGAAAATGTCCTACATTTTCTCCTGGTATTTTATACTTTTATGTTTTATGttatcaaataagaaaggatgctatttgttacatagtatcatgttatgtttgtatagatatatgttattaatgtaagtgttccagaaattgtatgaaatttcta-aaatctgatatgtcctgggataatgttatcagttataattccagttgttattttaaaatgtcatatatcacatgaataactaaattttcttatgaaaattcaaatgaa i rheMac3.chr10 I 231 C 0 s macFas5.chr10 80903736 575 - 96509753 aaaaaaaaaagaaaGATTCATTCCTGTGACATGTAAGGGAATGCTTCTATATCACAGGTACATCCCA----------CCACATCCCACTACTTACTGTACCATCGCACCCACTTGAGGTTTCAGTGCAGCAAGCCTGGCCGTGCCCTACCATACCTCACAccttttcagatctgtggtccattttctttctgtctgcctatactttt-ttcttaatttgt----agacactct----------tgcatattaacctgtggtctgtcacatgtactgcaaatatattcttcagtcagtcatttgccatttaactttccttgtcg-tttatttttt---------------------------------------------------------------------------------------------acattatgaaaatgtcctacattttctcctggtattttatacttttatgttttatgttatcaaataagaaaggatgctatttgttacatagtatcatgttatgtttgtatagatatatgttattaatgtaagtgttccagaaattgtatgaaatttcta-aaatctgatatgtcctgggataatgttatcagttataattccagttgttattttaaaatgtcatatatcacatgaataactaaattttcttatgaaaattcaaatgaa i macFas5.chr10 I 10 C 0 s papAnu2.chr10 76178479 573 + 90941950 ---aaaaaaaaaaagattcattccTGTGACATGTAAGGGAATGCTTCTATATCACAGGTACATCCCA----------CCACATTCCACTACTTACTGTACCATCGCACCCACTTAAGGTTTCAGTGCAGCAAGCCTGGCCTTGCCCTACCATACCTCACACCTTTTCAGATCTGTGgtccattttctttctgtctgcctatactttt-ttcttaatttgt----agaCACTCT----------TGCATATTAACCCGTGGTCTGTCACATGTACTGCAAATATATTCTTCAGTCAGTCATTTGCCATTTAACTTCCCTTGTca-cttatttttt---------------------------------------------------------------------------------------------acattataaaaatgtcTTACATTTTCTCCtggtattttatacttttatgttttatgtcATCAAATAAGGAAGGGTGCTATTTGTTACATAGTATCATGTTATGTTTGTGTAGATATATGTTATTAATGTAAGTGTTCCAGAAATTGTATGAAATTTCTAGAAATCTGATATGTCCTGGGATAATGTTATCAGCTATAATTCCAGTTGTTATCTTAAAATGTCATATACCAAATGAATAACTaaattttcttatgaaaattcAAATGAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18445315 576 + 33263144 aaaaaaaaaaaaaaGATTCATTCCTGTGACATGTAAGGGAATGCTTCTATATCACAGGTACATCCCA----------CCACATCCCACTACTTACTGTACCATCACACCCACTTGAGGTTTCAGTGCAGCAAGCCTGGCCGTGCCCTACCACACCTCACAccttttcagatctgtgatccattttctttctgtctgtctatactttt-ttcttaatttgt----agacactct----------tgcatattaacccgtggtctgtcacatgtactgcaaatatattcttcagtcagtcatttgccatttaactttcctTGTCA-TTTATTTTTT---------------------------------------------------------------------------------------------ACATTATAAAAATGTCTTACATTTTCTCCTGGTATTTTATACTTTTATGTTTTATGttatcaaataagaaagggtgctatttgttacatagtatcatgttatgtttgtatagatatatgttattaatgtaagtgttccagaaattgtatgaaatttctagaaatctgatatgtcctgggataatattatcagctataattccagttgttatcttaaaatgtcatataccacatgaataactaaattttcttatgaaaatacaaatgaa i chlSab2.chr19 I 8 C 0 a score=1503994.000000 s hg38.chr22_KI270876v1_alt 3558 526 + 263666 ctctcatgagatcattaaccatggccattttaa-tttttttt--tcatccaccaagcagttatcatttactctgatgctttcctgaaagcacttgcaaatcgctatgacacaaaacttcaagagattcat-aaaaaaaagactcaagcacaggtgtctgataacttttaaatcacactgttgaacCCATTAAACTGGGGTtgttctt-agccttacagccctgtgaatgggagctggatgacttcatagagacttcagagaaattgctacaacagtttatacctggacaaccttggtgcctgaggctgtgttggccacacagaaagttcaccagaaacctgatgatatcaccagagacatccaagctgcaagccgggaACACCCATCGGATTGAAACTGCCACACCAGAAGAAGAAAAAACAAATGCTATTTCTATATGAATACATCAGGAATAGATGCCCAAATCTGGGATCTTTAGAAATATAAAAGGCCAGGTCCAGGTGCTCCACCAGACGTGGGAAATACCGTCGA s panTro4.chr22 34383219 528 + 49737984 ctctcatgagatcattaaccatggccattttaa-tttttttt-gtcatccaccaagcagttatcatttactctgatgctttcctgaaagcacttgcaaatcgctatgacacaaaacttcaagagattcataaaaaaaaagactcaagcacaggtgtctgataacttttaaatcacactgttgaacCCATTAAACTGGGGTTGTTCTT-AGCcttacagccctgtgaaagggagctggatgacttcatagagacttcagagaaattgctacaacagtttatacctggacaaccttggtgcctgaggctgtgttggccacacagaaagttcaccagaaacctgatgatatcaccagagacatccaagctgcaagccgggaACACCCATCGGATTGAAACTGCCACACCAGAAGAAGAAAAAACAAATGCTATTTCTATGTGAATACATCAGGAATAGATGCCCAAATCTTGGATCTTTAGAAATATAAAAGGCCAGGTCCAGGTGCTCCACCAGACGTGGGAAATACCGTCAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30801030 525 + 46535552 ctctcatgagatcattaaccacggccattttaa-tttttttg--tcatccaccaggcagttatcatttactctgatgttttcccgaaagcacttgcaaatcgctaagacacaaaatttcaagagattcat--aaaaaaagactcaagcacaggtgtctgataacttttaaatcacactgttgaacCCATTAAACTGGGGTTGTTCTT-AGCcttacagccctgcgaatgggagctggatgacttgatagaggcttcagagaaattgctaccacaatttatacctggacaaccttggtgcctgaggctgtgttggccacacagaaagttcaccagaaacctgatgatatcaccagagacatccaagctgcaagccgggaACACCCATCGGATTGAAACTGCCACACCAGAAGAAGGAAAAACAAATGCTATTTCTATGTGAATATATCAGGAATAGATGCCCAAATCTTGGATCTTCAGAAATATAAAAGGCCAGGTCCAGGTGCTCAACCAGATGTGGGAAATACCGTCAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100371159 526 - 115148730 ctctaatgagatcattaaccatggccattttaa-tttttttt-gccatctaccaggcagttatcatttactctgatgctttcctgaaagcacttgcaaatcactatgacacaaaatttcaagagattcat--aaaaaaagactcaagcacaggtgtctgataacttttaaatcacactgttgaacCCATTAAACTGGGGTTGTTCTT-AGCcttacagccctgcgaatgggagctgcatgacttgatagagacttcagagaaattgctacaacagtttatacctggacaatcttggtgcctgaggctgtgttggccacacagaaagttcaccagaaacctgatgatatcaccagagacatccaAGCTGCAAGCCGGGAACACCCATCGGATTGAAACTGCCACACCAGAAGAAGAAAAAACAAATGCTCTTTCTATGTGAATACGTCAGGAATAGATGCCCAAATCTTGGATCTTTAGAAATATAAAAGGCCAGGTCCAGGTGCTCCACCAGATTTGGGAAATACCATCAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80491371 528 + 95678458 ctctcatgagatcattaaccatggccattttaa-tttttttttgtcatacaccaggcggttatcatttactctgatgctttcctgaaagcacttgcaaatcgctatgacacaaaatttcaagagattcat--aaaaaaagactcaagtgtaggtgtctgataactttTAATTCACACTGTTGAACCCATTAAACTGGAGTTGTTCTTAAGCcttacagccctgcgaatgggagctggatgacttgatagagacttcagagaaatagttacaacaggttatacctggacaacctcggtgcctgaggctgtgttggccacacagaaagttcaccagaaacctgatgatatcaccagagacatccaagctgcaaaccaggaaaactcattggattgaaactgccGCACCAGAAGAAGAAAAAACAAATGCTATTTCTATGTAAGTATGACAGGAATAGATGCCCAAATCTTGGATCTTTAGAGATATAAAAGGCTAGGTCCAGGTTCTCCAGCAGATGTGGAAAACATCATCAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80904311 528 - 96509753 ctctcatgagatcattaaccatggccattttaa-tttttttttgtcataccccaggcggttatcatttactctgatgctttcctgaaagcacttgcaaatcgctatgacacaaaatttcaagagattcat--aaaaaaagactcaagtgtaggtgtctgataactttTAATTCACACTGTTGAACCCattaaaccggagttgttcttaagccttacagccctgcgaatgggagctggatgacttgatagagacttcagagaaatagttacaacaggttatacctggacaacctcggtgcctgaggctgtgttggccacacagaaagttcaccagaaacctgatgatatcaccagagacatccaagctgcaaaccaggaaaactcattggattgaaactgccGCACCAGAAGAAGAAAAAACAAATGCTATTTCTATGTAAGTATGACAGGAATAGATGCCCAAATCTTGGATCTTTAGAGATATAAAAGGCTAGGTCCAGGTTCTCCAGCAGATGTGGAAAACATCATCAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76179052 527 + 90941950 CTCTCATGAGATCATTAACCatggccattttaa-tttttttttgtcacccagcAGGCGGTTATCATTTACTCTGATGCTTTCCTGAAAGCACTTGCAAATCGCTATGACACAAAATTTCAAGAGATTCAT--aaaaaaaGACTCAAGCGTAGGTGTCTGATAACTTTTAATTCACACTGTTGAACCCATTAAACCGGAGTTGTTCTT-AGCCTTACAGCCTTGCGAATGGGAGCTGGATGACTTGATAGAGACTTCAGAGAAATAGTTACAACAGGTTATACCTGGACAACCTTGGTGCCTGAGGCTGTGTTGGCCACACAGAAAGTTCACCAGAAACCTGATGATATCACCAGAGACATCCAAGCTGCAAACCAGGAAAACCCATCAGATTAAAACTGCCAcaccagaagaagaaaaaacaaatgctatTTCTATGTGAGTACGACAGGAATAGATGCCCACATCTTGGATCTTTAGAGGTATAAAAGGCCAGGTCCAGGTTCTCCAGCAGATGTGGAAAACATCATCAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18445891 525 + 33263144 ctatcatgagatcattaaccatggccattttaattttttttttgtcatctaccaggcggttatcatttactctgatgctttcctgaaagcacttgcaaatcgctatgacacaaaatttcaagagattcat--aaaaaaagactcaagtgtaggtgtctgataactttTAATTCACACTGTTGAACCCATTaaactggagttgttctt-agccttacggccctgcgaatgggagctggatgacttgatagagacttcagagaaattgctacatcaggttatacctggacaaccttggtgcctgaggctgtgttggccacacagaaagttcaccagaaacctgatgatatcaccagagacatccaagctgcaaaccaggaaaacccattggattgaaactgccACACC---AGAAGAAAAAACAAATGCTATTTCTATGTGAATACGACAGGAATAGATGCCCAAATCTTGGATCTTTAGAGGTATAAAAGGCCAGGTCCAGGTTCTCCAACAGATGTGGAAAACATCATCAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198196213 502 + 210400635 ctctcatgagatctttaa-cacggtcttgtcat-ttt------gtcattca-caggcacttactgtttactctgctgctttcctgaaagcgcttgcaaaccgctatgatacaaaattgcaagagattcat----aaagagactcaagcacaggtatctgataacttttacgtcacactactagacccattaaactggggttgttctt-agccttacagccctgcaaaaggaagctggatgacttgacagagacttcagagaaattgccatgacagtttatacctggacaaccttggtgtctgacgctgtgttggccgcacagaaaggtcaccagaaacctgatgataccaccagagacacccaagcttgaaaccgggaaaagCCATCAGATTGAAACTGCTGCATCAGGAGAAGG--AAACACATGCTATTTTTATATC-----------AATAGACGCCCAAATCTTGGATCTTTAGAGATGTACAGATCAATG--CAGGTACTCCACCAGATGCGGGAAACACTGTCAA i calJac3.chr1 N 0 I 315 a score=1974181.000000 s hg38.chr22_KI270876v1_alt 4084 728 + 263666 CTGATCTAGTTAAATCAAGAGATTAAATCtcggctcttggggaccctagtttcagggtactttccaaactcttggcattatcctgtcattagtcctactgataacatttcctatatgttgcttctctcaagagtcttaaatgcttgtgagcagccactgactcatcacatgatctcaggaggatggaggaacaaaaaCTGCTTCAGTTGGAATTGTCAAAAAAAGAAAAAAGCCTACTGAAACTCTGCTTCACAGTCTTCAGACGGCCATGGAGACAAAGACATGTGGAAACCGAGTGTAGCGCTAAGCAGTGGGTCACACTCTGAGTCCGACTGAGAGAATGACCCAAATTGGGCAGTTGTTAAAAAGAAACAGGAAAATAGATgaccaggtgtggtggctcacacccgtaatcccagcactttgggaggccgaggtaggtggatcact-------------------------tcgccaacatggtgaaa-ccccctctctacaaaaagtacaaaaaaattagccttgtgtggtggtgtacgcctgtaatcccagatactccggaagctgaggcatgagaatcacttgaacccaagaggcagaggttgcagtgagctgagatcgcgccattgcactccagcctggagtat--------aagaccctgtcga-------------------------aagaaagaacaaagaaagaaag---------------agaaagaaagaa--agagagagagagagag----------------------------agaaggaaggaaggaaggaaggaaggaaggaaggaagga s panTro4.chr22 34383747 730 + 49737984 CTGATCTAGTTAAATCAAGAGATTAAATCtcggctcttggggaccctagtttcagggtactttccaaactcttggcattatcctgtcattagtcctactgataacatttcctatatgttgcttctctcaagagtcttaaatgcttgtgagcagccactgactcatcacatgatctcaggaggatggaggaacaaaaaCTGCTTCAGTTGGAATTGTCAAAAAAAGAAAAAAGCCTACTGAAACTCTGCTTCATGATCTTCAGACGGCCATGGAGACAAAGACATGTGGAAACCGAGCGTAGCGCTCAGCAGTGGGTCACACTCTGAGTCCGACTGAGAGAATGACCCAAATTGGGCAGTTGTTAAAAAGAAACAGGAAAATAGATggccaggtgtggtggctcacacccgtaatcccagcactttgggaggcagaggcgggcggatcact-------------------------tcgccaacatggtgaaa-ccccctctctacaaaaagtacagaaaaattagcctcgtgtggtggtgtacgcctgtaatcccagatactccggaagctgaggcatgagaatcacttgaacccaagaggcagaggttgcagtgagccgagatcgcgccattgcactccagcctggagtat--------aagaccctgtcga-------------------------aagaaagaacaaagaaagaaag---------------ataaagaaAGAA--AGAGAGAGAGAGAGAA--------------------------TCggaagggaggaaggacggaaggaaggaaggaaggaagga i panTro4.chr22 C 0 I 2902 s ponAbe2.chr22 30801555 796 + 46535552 CTGATCTAGTTAAATCAAGAGATTAAATCTCGGCTCTtggggcccctagtttcagggtactttccaaactcttggcattatcctctcattagtcctaccaataacatttcctatacgttgcttctctcaagagtcttaaacgcttgtcagcagccactgactcatcacatgatctcaggaggatggaggaacaaaaactgcttcagttggaattgtcaaaaaaag-aaaaatcctactgaaactctgcttcatgatcttcaaacggccatggagacaaagacatgtggaaaccgagtgtagcgctaagcagtgggtcacactctgagtctgactgagagaatgacccaaattgggcaattgttaaaaagaaaCAGGAAAATAGATggccaggtgtggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggtggatcact-------------------------tcgccaacatggtgaaacccccctctctacaaaaactacaaaaaaattagccttgtgtggtggtgtacgcctgtaatcccagatactccggaaactgaggcatgagaatcacttgaactcaagaggcagaggttgcagtgagccgagatcgcgccattgcactccagcctggagtat--------aagaccgtgtcaaacaaagacaaagaagaaagaaaaTGAAGaagaaagaaagagagaaagaannnnnnnnnngaaagaaagaaagaa--agagagagagaaagaaagaaagaaagaaataaagaaagaaagaaagaaggaaggaaggaaggaaagaaggaaggaaggaagga i ponAbe2.chr22 C 0 I 8 s nomLeu3.chr7b 100371685 701 - 115148730 CTGATCTAGTTAAATCAAGAGATTAAATCtcggctcttggggaccctagtttcaggggactttccaaactcttggcattatcctctcattagtcctactgatatcatttcctatatattgcttctctcaagagtcttaaatgcttgtcagcagccactgactcatcacatgatctcaggaggatggaggaacaaaaactgCTTCAGTTGGAATTGTCAAAAAAAGAAAAAAGCCTACTGAAACCCTACTTCATGATCTTCAGACGGCCATGGAGACAAAGACATGTGGAAATCGAGCGTAGCGCTAAGCAGTGGGTCACACTCTGAGTCCGACTGAGAGAATGACCCAGATTGGGCAATTGTTCAAAAGAAACAGGAAAGTAGATggccaggtgtggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggt-------t-------------------------tcgccaacatggtgaaa-ccccctctctacaaaaagtacaaaaaaattcgccttgtgtggtggtgtacgcctgtaatcccagatactccggaagcggaggcatgagaatcacttgaacccaagaggcagaggttgcagtgagccgagatcgcgccattgcactccagcctggAGTAT--------AAGACCCTGTCAa-------------------------aagaaagaacaaagaaagaaag------------------aacaaagaa--agaaagaaaAAGAAAT---------------------------------------------GAAGGAAGGAAGGAagggaggg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80491899 727 + 95678458 CTGATCTAGTTAAATCAAGAGATTAAATCttggctcttggggaccctagtttcggggtactttccaaactcttggcattatcctctcattagtcctactgataacatttcctatctgttgcttctctcaggagtcttcagtgcttgtcagcagccactgactcatcacgtgatctcaggaggatggagcaacaaaaactgcttcaattggaattgtcaaaaaaag-aaaaaacctactgaaactctgcttcatgatcttcagacag-catggagaccaagtcatgtggaaaccgagcgtagcgctaagcagtgggtcacaccctgagtccgactgagagaatgacctgaattgggcaattgttaaaaagaaaCAAGAAAATAGATggccaggtgtggtggctcaggcctgtaatcccagaacttctggaggccgaggcgggtggatcact-------------------------tgg-caacatggtgaaa-ccccttctctacaaaaagtacaaaagaattagccttgtgtggtggtgtgagcctgtaatcccacatactcaggaggctgaggcatgagaatcactggaaccctggaggcagaggttgcagtgagctgagatcgcgccattgcactccagcctggagtat--------gataccctgtcga-------------------------aagaaagaagaaagaaaggaag-------------agagaaagagagaa--agaaagaaagaaggaa----------------------------ggaaggaaggaaggaaggaaggaaggaaggaaggaagga i rheMac3.chr10 C 0 I 11 s macFas5.chr10 80904839 728 - 96509753 CTGATCTGGTTAAATCAAGAGATTAAATCttggctcttggggaccctagtttcggggtactttccaaactcttggcattatcctctcattagtcctactgataacatttcctatctgttgcttctctcaggagtcttcagtgcttgtcagcagccactgactcatcacgtgatctcaggaggatggagcaacaaaaactgcttcaattggaattgtcaaaaaaag-aaaaaacctactgaaactctgcttcatgatcttcagacag-catggagaccaagtcatgtggaaaccgagcgtagcgctaagcagtgggtcacaccctgagtccgactgagagaatgacccgaattgggcaattgttaaaaagaaaCaagaaaatagatggccaggtgtggtggctcaggcctgtaatcccagaacttctggaggccgaggcgggtggatcact-------------------------tggccaacatggtgaaa-ccccttctctacaaaaagtacaaaagaattagccttgtgtggtggtgtgagcctgtaatcccacatactcaggaggctgaggcatgagaatcactggaaccctggaggcagaggttgcagtgagctgagatcgcgccattgcactccagcctggagtat--------gataccctgtcga-------------------------aagaaagaagaaagaaaggaag-------------agagaaagagagaa--agaaagaaagaaggaa----------------------------ggaaggaaggaaggaaggaaggaaggaaggaaggaagga i macFas5.chr10 C 0 I 62 s papAnu2.chr10 76179579 727 + 90941950 CTGATCTAGTTAAATCAAGAGATTAAATCTTGGCTTTTGGGGACCCTAGTTTCAGGGTACTTTCCAAACTCTTGGCATTATCCTCTCATTAGTCCTA-TAATAACATTTCCTATCTGTTGCTTCTCTCAGGAGTCTTCAATGCTTGTCAGCAGCCACTGACTCATCACGTGATCTCAGGAGGATGGAGCAACAAAAACTGCTTCAATTGGaattgtcaaaaaaag-aaaaaacctactGAAACTCGGCTTCATGATCTTCAGACAG-CATGGAGACCAAGTCATGTGGAAACCGAGTGTAGCGCTAAGCAGTGGGTCACACTCTGAGTCCGACTGAGAGAATGACCCGAATTGGGCAattgttaaaaagaaacaagaaaatagatggccaggtgtggtggctcaggcctgtaatcccagcacttctggaggccgaggcgggtggatcact-------------------------tggccaacatggtgaaa-ccccttctctacaaaaagtacaaaagaattagccttgtgtggtggtgtgagcctgtaatcccacatactcaggaggctgaggcatgagaatcactggaaccctggaggcagaggttgcagtgagctgagatcgcgccattgcactccagcctggagtat--------GATACCCTGtcga-------------------------aagaaagaagaaagaaaggaag-------------agagaaagagagaa--agaaagaaagaaggaa----------------------------ggaaggaaggaaggaaggaagtaaggaaggaagtaagga i papAnu2.chr10 C 0 I 19 s chlSab2.chr19 18446416 730 + 33263144 CTGATCTAGTTAAATCAAGAGATTAAATCttggctcttggggaccctagtttcagggtactttccaaactcttggcattatcctctcattagtcctactgataacatttcctctctgttgcttctctcaggagtcttcaatgcttgtcagcagccaCTGACTCATCACGTGATCTCAGGAGGATGGAGCAACAAAAACTGCTTCAATTGGAATTGTCAAAAAAAG-AAAAAACCTGCTGAAACTCTGCTTCATGATCTTCAGACAG-CATGGAGACCAAGTCATGTGGAAACCAAGTGTAACGCTAAGCAGTGGGTCACACTCTGAGCCCGACTGACAGAATGACCCAAATTGGGCAATTGTTAAAAAGAAACAAGAAAATAGATggccaggtgtggtggctcaggcctgtaatcccagcacttctggaggccgaggcgggtggatcact-------------------------tggccaacatggtgaaa-ccccttctctacaaaaagtacaaaagaattagccttgtgtggtggtgtgagcttgtaatcccacatactcaggaggctgaggcatgagaatcacttgaaccctggaggcagaggttgcagtgagctgagatcgcgccattgcactccagtctggagtat--------gataccctgtcga-------------------------aagaaagaagaaagaaaggaag-------------agagaaagagagaaagagagagagagagagaa----------------------------agaaagaagaaaggaaggaaggaaggaaggaaggaagga i chlSab2.chr19 C 0 I 16 s calJac3.chr1 198197030 683 + 210400635 CTGATCTATTTCAATCAAGAGATTAAACCTTGGCTCTTGGGGACCTTGGTTTCAGGATATTTTCCAATCTCTTGGCATTACCCTCTCATCAGTCCTACTGATGCCATCCCCTATGcgttgattctctcagg-gtcttaaatgcttgtcagcagccactgagtcatcacttgatctcaggaggatggagcaacaaaaaCTGCTTCAGTTGGAATTGTCAAAAAAAA-AAAAAAAAGACGGAAACCCTGCTTCATGATCTTCAGAGGG--------------CCACGTGGAAGCTGAGT-----GCTAAGCAGTGGGTCACACTCTGAGTCTGACTGAGAGAATGACCCAAAGTGGACAACTGTTAAAAAGAAAAAGGAAAATACATgacctggtgcggtgcctcgcgcctataatcccagcactttgggaggccaaggcaggtggatcacttgagcccaggagttcaagaccagcctggccaacatggcgaaa-tgccgtctctagaaaaaatatttaaaaattagcctcgtgtggtggtacgcgcctgtaatgccaactactcgggaggctgaggcatgagattcactggaacccaggaggcggaggttgcagtgagctgagatcgcgccactgcactccagcctgggcaacagagcaagaagaccctgtctc-------------------------aaaaaaaaaaaaaaaaaaaaaa------------------aagaaTGCA--A---------------------------------------------------------------------------------- i calJac3.chr1 I 315 C 0 a score=109331.000000 s hg38.chr22_KI270876v1_alt 4812 44 + 263666 aggaaggaaggaaggaaggGAAAGAGGccctgagccgactagct s panTro4.chr22 34387379 44 + 49737984 agggagggagggagggagggaaagaggccctgagccgactagct i panTro4.chr22 I 2902 C 0 s ponAbe2.chr22 30802359 44 + 46535552 aggaaggaaggaaagaagggaaAGAGGccctgagccgactagct i ponAbe2.chr22 I 8 C 0 s nomLeu3.chr7b 100372386 44 - 115148730 agggagggagggagggagggaAAGAGGccctgagctgactagct i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80492637 44 + 95678458 aggaaggaaggaagggaggGAAAGAGGCCCTGAAccgactagct i rheMac3.chr10 I 11 C 0 s macFas5.chr10 80905629 44 - 96509753 aggaaggaaggaagggagggaaagaGGCCCTGAAccgactagct i macFas5.chr10 I 62 C 0 s papAnu2.chr10 76180325 44 + 90941950 aggaaggaaggaagggagggaaagaggccCTGAACCGACTAGCT i papAnu2.chr10 I 19 C 0 s chlSab2.chr19 18447162 44 + 33263144 aggaaggaaagaagggagggaaagagGCCCTGAGCCGACTAGCT i chlSab2.chr19 I 16 I 325 s calJac3.chr1 198197713 18 + 210400635 --------------------------GCTCTGggccaagtagcc i calJac3.chr1 C 0 C 0 a score=3003477.000000 s hg38.chr22_KI270876v1_alt 4856 1045 + 263666 atggccatgtaactgaaacagaattgatcctgatttcccctcaaatgctggttctaatcacaaataaaaattaagcttttcttccttgccaacctgaaaacattaagccaacacaaataagcttgtgcagctctgtttgcATGATAGAGATGAAGGAGCCTCCTCATTCATGCTTTGTAAGCTGCACTGTAACTGCTGGGCTACCTCTTAACCATgttc----------------------------------------------------------------------------ataaattattctttt-----------------------------------------------gcatgcacatt-caccttaaaaattcttaaatttgatctgattttatttttgacaAAGTATGATTTTGCTGTTGGCTCCTGAGAGTTGGCTTTGATGTGATAGTTATTGCTTATATTTCTAGCTTAATGGAAGCCTTTATTTGGATTTTGTTAAATGACGTTAAATATTTGTTCTGTAAAGGTTTATGGCTAGA---------------AGGggagaggaggagggaaacggaactctgg-aggagaaggggagggaagaggggcttacgtgtctagttgtgtctcacagggtttctgggtcagagagctcccaagggtggcagcagcttgggggccttagaatttcaaggctccagctcatccataggtaacacttgtcctgtgaggtttcacagggcatgcaaagcaggcaggctctaaatggctaacagtctaattgttgggacta-tttttaaaataactggatgtgtacaaatttgagtttggcagcagtgggcttttgagctaacagatgtgaatctgtagggaagaaataaaaaaccccatgggtccatacgcccaggccattgttggctcatttatagaacaGCAGCTTAGAGACAGCCCAGGTCCAAAGATTCTAATAAATTAAGGAGGTAAAGGCTCTCTCTTACTACATTGTGCACTGCATTGCAGACAGATGGGTCAAGTGTTTCAGGTGGGAGGAAGTGAAGGTGGAGCCACGTGGCCTACGGTAGCAATGAAGAGTTGATG--GTgtgtagtggcgctcatctgtagttccaactactggggaagctgaggcaggaggatcgcttgagcccagtaat s panTro4.chr22 34387423 1043 + 49737984 atggccatgtaactgagacagaattgatcctgatttcctctcaaatgctggttctaatcacaaataaaaattaagcttttcttccttgccaacctgaaaacattaagccaacacaaataagcttgtgcagctctgtttgcACAATAGAGATGAGGGAGcctcctcattcatgctttgtaagctgcactgtaactgctgggctacctctta-ccatgttc----------------------------------------------------------------------------ataaattattctttt-----------------------------------------------gcatgcacatt-caccttaaaaattcttaaatttgatctgattttatttttgacaAAGTATGATTTTGCTGTTGGCTCCTGAGAGTTGGCTTTGATGTGATAGTTATTGCTTGTATTTCTAGCTTAATGGAAGCCTTTATTTGGATTTTGTCAAATGACGTTAAATATTTGTTCTGTAAAGGTTTATGGCTAGA---------------AGGggagaggaggaggggaacggaactctgg-aggagaaggggagggaagaggggcttacgtgtctagttgtgtctcacagggtttctgggtcagagagctcccaagggtggcagcagcttgggggccttagaatttcgaggctccagctcatccataggtaacacttgtcccatgaggtttcacagggcatgcaaagcaggcaggctctaaatggctaacagtctaattgttgggacta-tttttaaaataactggatgtgtacaaatttgagtttggcagcagtgggcttttgagctaacagatgtgaatctgtagggaagaaatagaaaaccccatgggtccatacacccaggccattgttggctcatttatagaacaGCAGCTTACAGACAGCCCAGGTCCAAAGATTCTAATAAATTAAGGAGGTAAAGGCTCTCTCTTACTACATTGTGCACTGCATTGCAGACAGATGGGTCAAGTGTTTCAGGTGGGAGGAAGTGAAGGTGGAGCCACGTGG-CTACGGTAGCAATGAAGAGTTGATG--GTgtgtggtgttgctcatctgtagttccagctactggggaagctgaggcaggaggatcgcttgagctcagtaat i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30802403 1119 + 46535552 atggccgtataactgaaactgaattgatcctgatttcctctcaaatgctggctctaatcacaaataaaaattaagcttttcttcctcgccaacctgaaaacattaagccaacacaaataagcttgtgcagctctgtttgcacgatagagatgaaggagcctcctcattcatgctttgtaagctgcactgtaactgctgggctacctctta-ccatgctcacaaattattcttttttttttaaaattattatactttaagttttagggtacatgtgcacaatgtgcacgttagttaacaaattattctttt-----------------------------------------------gcatgcacaat-caccttaaaaattcttcaatttgatctgattttatttttgacaAAGTATGATTTTGCTGTTGGCTTCTGATAGTCGGCTTTGATGTGATAGTTATTGCTTGTATTTCTAGCTTAATGGAAGCCTTTATTTGGATTTTGTTAAATGACTTTAAATATTTGTTCTGTAAAGGTTTATGGCTAGA---------------AGGggagaggaggaggggaagggaactctggaaggagaaggggagggaagaggggcttacgtgtctagttgtgtctcacagggtctctgggtcagagagctcccaagggtggcagcagcttgggggccttagaatttcgaggctccagctcatccataggtaacacttgtcctgtgaggtttcacagggcatgcaaagcaggcaggctctaaatggcgaacagtttaattgttgggacta-tttttaaaataactggatgtgtacaaatttgagtttggcagcagtgggcttttgagctaacagatgtgaatctgtagtgaaaaaataaaaaacccgatgggtccatacgcccaggccattgttggctcatttatagaacaGCAGCTTAGAGACAGCCCAGGTCCGAAGATTCTAGTAAATTAAGGCGGGAAAGGCTCTCTC--GCTACACCGTGCACTGCATTGCAGACAGACGGGTCAAGTGTTTCAGCTGGGAGGAAGTGAAGGTGGAGCCACGTGGCCTACAGTAGCAATGAAGAGTTGATG--GTgtgtggtggcgctcgtctgtagttccagctactggggaagctgaggcaggaggatagcttgagcccagtaat i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100372430 1041 - 115148730 atggccatgtaactgaaactgaattgatcctgatttcccctcaaatgctggctctaatcacaaataaaaattaagcttttcttccttgccaacctgaaaacgttaagccaacacaaataagcttgtgcagctctgtctgcacgatagagaTGAAGGAGCCTCCTCATTCATGCTTCGTAAGCTGCACTGTAACTGCTGGGCTACCTCTTA-CCATATTC----------------------------------------------------------------------------ACAAATGATTCTTtt-----------------------------------------------gcatgcacaat-caccttaaaaattcttaaatttgatccgattttatttttgacaAAGTATGATTTTGCTGTTGGTTTCTGATAGTCAACTTTCATGTGATCGTTATTGCTTGTATTTCTAGCTTAATGGAAGCCTTTATTTGGATTTTGTTAAATGA--TTAAATATTTGTTCTGTAAAGGTTTATGGCTAGA---------------AGGggagaggaggaggggaggggaactctgg-aggagaaggggagggaagaggggcttacgtgtctagttgtgtctcacagggtctctgggtcagagagctcccaagggtggcagcagcttgggggccttagaatttcgaggctccagctcatccataggtaacacctgtcctgtgaggtttcacagggcatgcaaagcaggcaggctctaaatggatgacagtttaattgttgggactg-tttttaaaataactggatgtgtacaaatttgagtttggcagcagtgggcttttgagctaacagatgtgaatctgtagtgaagaaataaaaaaccccatgggtccatacg-ccaggccattgttggctcatttatagaacaGCAGCTTAGAGACAGCCCAGGTCCAAAAATTCTAATAAACTAAAGAGGTAAAGGCTCTCTCTTACTACACCATGCACTGCATTGCAGACAGATGGGTCAAGTGTTTCAGGTGGGAGGAAGTGAAGGTGGAGCCACGTGGCCTACAGAAGCAATGAAGAGTTGATG--GTgtgtggtggcgctcatctgtagttccagctactggggaagctgaggcaggaggatcgcttgagcccggtaat i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80492681 1093 + 95678458 atggccatgtaactgaaactaaattgatcctgatttcccctcaaatgctggctctacccacaaataaaaattaagcttttcttccttgccaacctggaaacatgaagccgatacaaataagcttgtgcagctctgtttgcaagacagaggtgaaggtgcctcctcattcttgctttgtaagctgcgctgtaactgctgggctgcttctta-ccatgttc----------------------------------------------------------------------------acaaattattcttttaacatgaagccgatacaaataagcttgtacaatcatgcttgaattaagcatgcacaat-caccttaaaaattcttaaatttgatctgattttatttttaacaAAGTATGATTTTGCTGTTGGTTTCTGAGAGTTGGCTTTGATGTGATAATTATTGCTCATATTTCTAGCTTAATGGAAGTTTTTATTTGGATTTTGTTAAATGACTTTGAGTATTTGTTCTGTAGAGGTTTATGGctaga---------------aggggaagtgaggagtggaagggaactcggg-aggagaaggggagggaagaggggcttacttgtctagtggtgtctcacagggtctc-gggtcagagagctcccaagggtggcagcagtttggaggccttagaattttgaggctccagctcatccatagataacacttgtcctgtgaggtttcacagggcatgcaaagcaggcaagctctaaatggctaacagtttaattgttgggactattttttacaataactggatgtgcacaaatttgagtttggcagcagtgggcttttgagctaacggatgtgaatctgtagtgaagaaataaacaaccccatgggtccataggcccaggccattgttggctcatttttagaacaGCAGCTTAGAGACAGCCCATGTCCAAGGATTCTAATAAATTAAGGAGGTAAAGGCTCCCTCTTACTACACAGTGCACTGCATTGCAGACAGAAGGGTCAAGTGTTTGAGGTGGGAGGAAGTGAAGGTGGAGCCACGTGGCCTACAGCAGCAATGAAGAGTTGATGGAgggtgtggtggcactcctctgtagttccagctactggggagactgaggcaggaggagcgtttgagcccaggaat i rheMac3.chr10 C 0 I 46 s macFas5.chr10 80905673 1046 - 96509753 atggccatgtaactgaaactaaattgatcctgatttcccctcaaatgctggctctacccacaaataaaaattaagcttttcttccttgccaacctggaaacatgaagccgatacaaataagcttgtgcagctctgtttgcaagacagaggtgaaggtgcctcctcattcttgctttgtaagctgcgctgtaactgctgggctgcttctta-ccatgttc----------------------------------------------------------------------------acaaattattctttt-----------------------------------------------gcatgcacaat-caccttaaaaattcttaaatttgatctgattttatttttaacaAAGTATGATTTTGCTGTTGGTTTCTGAGAGTTGGCTTTGATGTGATAATTATTGCTCATATTTCTAGCTTAATGGAAGTTTTTATTTGGATTTTGTTAAATGACTTTGAGTATTTGTTCTGTAGAGGTTTATGGctaga---------------aggggaagtgaggagtggaagggaacttggg-aggagaaggggagggaagaggggcttacttgtctagtggtgtctcacagggtctc-gggtcagagagctcccaagggtggcagcagtttggaggccttagaattttgaggctccagctcatccatagataacacttgtcctgtgaggtttcacagggcatgcaaagcaggcaagctctaaatggctaacagtttaattgttgggactattttttacaataactggatgtgcacaaatttgagtttggcagcagtgggcttttgagctaacagatgtgaatctgtagtgaagaaataaacaaccccatgggtccataggcccaggccattgttggctcatttttagaacaGCAGCTTAGAGACAGCCCATGTCCAAGGATTCTAATAAATTAAGGAGGTAAAGGCTCCCTCTTACTACACAGTGCACTGCATTGCAGACAGAAGGGTCAAGTGTTTGAGGTGGGAGGAAGTGAAGGTGGAGCCACGTGGCCTACAGCAGCAATGAAGAGTTGATGGAgggtgtggtggcactcctctgtagttccagctactggggagactgaggcaggaggagcgtttgagcccaggaat i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76180369 1045 + 90941950 ATGGCCATGTAACTGAAACTAAATTGATCCTGATTTCCCCTCAAATGCTGGCTCTAcccacaaataaaaattaagcttttCTTCCTTGCCAACCTGGAAACATGAAGCTGATACAAATAAGCTTGTGCAGCTCTGTTTGCAAGACAGAGGTGAAGGTGCCTCCTCATTCTTGCTTTGTAAGCTGCGCTGTAACTGCTGGGCTGCTTCTTA-CCATGTTC----------------------------------------------------------------------------ACAAATTATTCTTTT-----------------------------------------------GCATGCACAAT-CAccttaaaaattcttaaatttgatctgattttatttttaacaaagtatGATTTTGCTGTTGGTTTCTGAGAGTTGGCTTTGATGTGATAATTATTGCTCATATTTCTAGCTTAATGGaagtttttatttggattttgttaaatgac-TTGAGTATTTGTTCTGTAGAGGTTTATGGCTAga---------------aggggaagtgaggagtggaagggaactcggg-aggagaagtggagggaagaggggCTTACTTGTCTAGTGGTGTCTCACAGGGTCTC-GGGTCAGAGAGCTCCCAAGGGTGGCAGCAGCTTGAGGGCCTTAGAATTTTGAGGCTCCAGCTCATCCATAGATAACACTTGTCCTGTGAGGTTTCACAGGGCATGCAAAGCAGGCAAGCTCTAAATGGCTAACAGTTTAATTGTTGGGACTATTTTTTACAATAACTGGATGTGTACAAATTTGAATTTGGTAGCAGTGGGCTTTTGAGCTAACAGATGTGAATCTGTagtgaagaaataaacaaccccatgGGTCCATAGGCCCAGGCCATTGTTGGCTCATTTTTAGAACAGCAGCTTAGAGACAGCCCATGTCCGAGGATTCTAATAAATTAAGGAGGTAAAGACTCCCTCTTACTACACAGTGCACTGCATTACAGACAGAGGGGTCAAGTGTTTGAGGTGGGAGGAAGTGAAGGTGGAGCCACGTGGCCTACAGCAACAATGAAGAGTTGAtggagggtgtggtggcactcctctgtagttccagctactggggagactgaggcaggaggatcgtttgagcccaggaat i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18447531 1046 + 33263144 atggccatgtaactgaaactaaattgatcctgatttcccctcaaatgctggctctacccacaaataaaaattaagcttttcttccttgccaacctggaaacatgaagccgatacaaataagcttgtgcagctctgtttgcaagacagaggtgaaggtgcctcctcattcttgctttgtaagctgcactgtaactgccgggctgcttcttg-ccatgttc----------------------------------------------------------------------------gccaattattctttt-----------------------------------------------gcatgcacaat-caccttaaaaattcctaaatttgatctgattttatttttaacaAAGTATGATTTTGCTGTTGGTTTCTGAGAGTCGGCTTTGATGTGATAATTATTGCTCATATTTCTAGATTAATGGAAGTTTTTATTTGGATTTTGTTAAATGACTTTGACTATTTGTTCTGTAGAGGTTTATGGctaga---------------aggggaagtgaggagtggaagggaactcggg-aggagaaggggagggaagaggggctcacttgtctagtggtgtctcacagggtctc-gggtcagagagctcccaagggtggcagcagcttgggggcctcagaattttgaggctccagctcatccatagataacacttgtcctgtgaggtttcacagggcatgcaaagcaggcaagctctaaatggctaacagtttaattgttgggactattttttacaataactggatgtgtacaaatttgagtttggcagcagtgggcttttgagctaacagatgtgaatctgtagtgaagaaataaacaaccccatgggtccataggcccaggccattgttggctcatttttacaacaGCAGCTTAGAGACAGCCCGTGTCCGAGGATTCTAATAAATTAAGGAGGTAAAGCCTCCCTCTTACTACACAGTGCACTGCATTACAGACAGAAGGGTCAAGTGTTTGAGGTGGGAGGAAGTGAAGGTGGAGCCACGTGGCCTATAGCAGCAATGAAGAGTTGATGGAgggtgcggtggcactcctctgtagttccagctactggggagattgaggcaggaggatcgcttgagcccaggaat i chlSab2.chr19 I 325 C 0 s calJac3.chr1 198197731 1058 + 210400635 atggtcatgtacccaaacctgaattgatcctgatttcccctcaaatgctgtttctaagcacacataaaaattaagcttttcttccttgccaacctgcaaacattaagtcagtacagataagcttgtgcagctctgtttgcACGCTGGAGATGAGCatgcctcctcattcacgctttgtaagctgcactgtaactgctgggtctcctctta-ctgtgttc-------------------------------aatttgaggtctcctagttc-------------------------acaaatgattctttt-----------------------------------------------gcatgcacaataaaccttaaacattcttaaattggatctgactttatttttgacaAAGTATGATTTTGCTGTTGGTTTCTGATAGTTGGTTTTGATGTGATAGTTACTG---GTATTTCTAGCTTAACGGACG-TTTTATTTGGATTTTATTAAATGACTTTAAGTATTTGTGctgtagaggttcatggctaggagggcaccatgcagcagggaaggggaggagggaaagggagctctgg-aggaaaag-ggagggaagaggggctaatgtgtctagtg--gtctcccagggtctctgggtcagagagctcccaagggtggcagcagcttggcggccttagaattttgaggctccagctcatccataagtaacacccgtcctgtgagttttcacagggcatgcaaagcaggcaggctctaagtggctaacagtttgattgttgggacta-tttttaaaataactggatttgtacaaatttcagtttggcagcagtgggcttttgagctaacagatgtgaatctgtagtgaagaaataaacaaccccatcggtccatacgccccggccattgttggctcatttatagaaTGGCAGCTTAGAGACAGCCCAGGCTTGAAGATTCTAATAAGTGAAGGTGGTAAAGGCTCCCTCTTACTGGAGCGTGCACTGGATTGCAGAGA----GGTCATGTGTTTGAGGTTGGAGGAAATGGAGGTGAAGCCACATGGCCTAGAGTAGCACT-AAGAGTTGATGGAGGCTgtagtggtgctcacctgtagttccagctttgggggaggctgaggcaggaggacggctt------------ i calJac3.chr1 C 0 C 0 a score=16447.000000 s hg38.chr22_KI270876v1_alt 5901 31 + 263666 ttgaggctgcggtgagccatgatatcatcac s panTro4.chr22 34388466 31 + 49737984 ttgaggctgcagtgagccatgatatcatcac i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30803522 31 + 46535552 ttgaggctgcattgagccatgatatcatcac i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100373471 28 - 115148730 ttgaggctgcggtaagccatgat---atcac i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 80906719 10 - 96509753 tcgagcctag--------------------- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76181414 31 + 90941950 tcgaggctgcagtgagccatgatctcatcgc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18448577 10 + 33263144 tcgagcctgg--------------------- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198198789 16 + 210400635 ---------------gtcacgatctcatcac i calJac3.chr1 C 0 C 0 e rheMac3.chr10 80493774 46 + 95678458 I a score=371655.000000 s hg38.chr22_KI270876v1_alt 5932 139 + 263666 tacattctagcct--ggaaacagagtgagaccccatctcttaaaaataaaaaCGAACTAAT-------------------------------------AACACAGGAGCAAGTGGTGCCTGAATGCTGAAGGTAGCAAAAGTTCCCATGGTGAGATTTCCTTCTGTGAAACCCCAgtg s panTro4.chr22 34388497 140 + 49737984 tacattctagcct-gggaaacagagtgagaccccatctcttaaaaataaaaaCGAGCTAAT-------------------------------------AACACAGGAGCAAGCGGTGCCTGAATGCTGAAGGTAGCAAAAGTTCTCATGGTGAGATTTCCTTCTGTGAAACCCCAgtg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30803553 140 + 46535552 tacattctagcct-gagaaacagagtgagaccccatctcttaaaaataaaaaCGAGCTAAT-------------------------------------AACACAGGAGCAAGCGGTGCCTGAATGCTGAAGGTAGCACAAGTTCCCGTGGTGAGATCTCCTTCTGTGAAACCCCCgtg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100373499 141 - 115148730 tacattctagcctgggaaaacagagttagaccccatctcttcaaaataaaaaCGAGCTGAT-------------------------------------AACACAGGAGCAAGCAGTGCCTGAATGCTGAAGGTAGTACAAGTTCCCATGGTGAGATTTCCTTCTGTGAAACCCCAgtg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80493820 140 + 95678458 tacattccagcct-gggtaacagagtgagatcccatcttttaaaaataaaaaCGAGCTGAT-------------------------------------AACACACGAGCAAGCAGTGTCTGAATGCTCAAGGTAGTACAAGTTCCCATGGTGAGATTTGCTTCGGTGAAACCCCAgtg i rheMac3.chr10 I 46 C 0 s macFas5.chr10 80906729 140 - 96509753 tacattccagcct-gggtaacagagtgagatcccatcttttaaaaataaaaaCGAGCTGAT-------------------------------------AACACACGAGCAAGCAGTGTCTGAATGCTCAAGGTAGTACAAGTTCCCATGGTGAGATTTGCTTCGGTGAAACCCCAgtg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76181445 140 + 90941950 tacattccagcct-gggtaacagagtgagactccatcttttaaaaataaaaacgagCTGAT-------------------------------------AACACACGAGCAAGCAGTGTCTGAATGCTCAAGGTAGTACAAGTTCCCATGGTGAGATTTGCTTCGGTGAAACCCCAGTG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18448587 140 + 33263144 tacattccagcct-gggtaacagagtgagaccccatcttttaaaaataaaaaCGAGCTGAT-------------------------------------AACACACGAGCAAGCAGTGTCTGAATGCTCAAGGTAGTACAAGTTCCCATGGTGAGATTTGCTTCGGTGAAACCCCAgtg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198198805 177 + 210400635 tgcattccatcct-gggcaacagggcgagatcccatctcTTAGACATGAAACTGAGGTGATGGAAGTGACGAAGGGCACTGCGCCACATGGAGTCACGGACACGTGAGCAGGTGGTGGCTGAACGATGCTGACAGTGCAAGTTCCCAGGGTGCAATTTCCTTCTGCGAAACCCCAGTG i calJac3.chr1 C 0 I 17 a score=633718.000000 s hg38.chr22_KI270876v1_alt 6071 267 + 263666 tacacttcttgcgatattgggagtaatatcatcctctcccatcatggatatcaagaacaatattacaaaggaggtgtacaccccctgcgatatggagagtaatagtatgctctccccttcgggatattaggaacaatatcgcagaaggtgtgtacaacccctgcggtattgggagtcatatcatcctctccccctgaatataagaaacaataccacaggaggatgtacaccccctgcgatattgggagtaatatcatcttctccccc s panTro4.chr22 34388637 267 + 49737984 tacacttcttgcgatattgggagtaatatcatcctctcccatcatggatatcaagaacaatattacaaaggaggtgtacaccccctgcgatatggagagcaatagtatgctctccccttcgggatattaggaacaatatcgcagaaggtgtgtacaacccctgcggtattgggagtcatatcatcctctccccctgaatataagaaacaacatcacaggaggatgtacaccccctgcgatattgggagtaatatcatcttctccccc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30803693 267 + 46535552 tacacttcttgcgatattgggagtaatatcatcctctcccatcatggatatcaagaacaatattacaaaggaggtgtacaccccctgcgatacggagagcaatagtatgctctcccctttgggatattaggaacaatgtcgcaggaggtgtgtacaacccctgcggtattgggagtcatatcatcctctcccactgaatataagaaacaataccacaggaggatgtacaccccctgcgatattgggagtaatatcattttctccccc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100373640 267 - 115148730 tacacttcttgcgatattgggagtcatatcatcctctcccatcatggatattaagaagaatattacaaaggaggtgtacaccccctgcgatatggagagtaatagtatgctctccctttcgggatattaggaacaatatcacaggaggtgtgtagaacccctgtgatattgggagtcatatcatcctctcaccctgaatacaagaaacagtatcacaggaggatgtacaccccctgcgatattgggagtaatatcattttctccccc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80493960 267 + 95678458 tacacttcttgcagtcttgggagtaatatcattgtctcccatcatggatattaagaacaatattacaaaggaggtgcacaccccctgcagtattgagagtaagattatgctctccccttcgggatattaggaacaatatcgcaggaggtgtgcacaatccctgtgatattgggagtaatatcatcctctccccctgaatggaagacacaatatcacaggaggatgtacaccccctttgatattgggagtcatacccttttctccccc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80906869 267 - 96509753 tacacttcttgcagtcttgggagtaatatcatcctctcccatcatggatattaagaacaatattacaaaggaggtgcacaccccctgcggtattgagagtaagattatgctctccccttcgggatattaggaacaatatcgcaggaggtgtgtacaatccctgtgatattgggagtaatatcatcctctccccctgaatgtaagaaacaatatcacaggaggatgtacaccccctgtgatattgggagtcataccattttctccccc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76181585 267 + 90941950 TACACTTCTTGCAAtcttgggagtaatatcatcttctcccatcatggatattaagaacaatattacaaagGAGGTGCACACCCCCTGCAGTATTGAGAGTAAGATTATGCTCTCCCCTtcgggatattaggaacaatatcgcaggaggtgtgtacaacccctgcgatattgggagtaatatcatcctctccccctgaatgtaagaaacaatatcacaggaggatgtacaccccctgcgatattgggaatcATACCATTTTCTCCCCC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18448727 267 + 33263144 tacacttcttgcaatcttgggagtaatatcatcctctcccatcatggatattaagaacaatattacaaaggaggtgcacaccccctgcgatattgagagtaagattatgctctccccttcgggatattaggaacaatatcgcaggaggtgtgtacaatccctgcgatattgggagtaatatcatcctctccccctgaatgtaagaaacaatatcacaggaggatgtacacccccggcgatattggtagtcatatcattttctccccc i chlSab2.chr19 C 0 C 0 e calJac3.chr1 198198982 17 + 210400635 I a score=532623.000000 s hg38.chr22_KI270876v1_alt 6338 330 + 263666 tcgggatattcggaacaatatcacagtgggtgtgtacaccccctgcgatattgccactagtatcatcctctccctgccagcatataaggaacagtatcacaagggggtgtaca-cccctgcg------------------------------------------------atattggggataatgtcttcctctcccccgctggctattaggaacaatgtcccagaaggggtgtacaccccctgctatattgggagtgatatcatcctctccgtccctggatattaggaacaatatcactagggagtgtacacctcctgc----------aatagtgagactaatatcatcctctcaccccctggatattaggaacaatatcacagggg s panTro4.chr22 34388904 379 + 49737984 tcgggatattcggaacaatatcacagtgggtgtgtacaccccctgcgatactgccactagtatcatcgtctccctcccagcatacaaggaacagtatcgcaagggggtgtacaccccctgcgatattgccactagtatcatcgtctccctgccagcatataaggaacagtatattggggataatatcttcctctcccctgctggctattaggaacaatgtcccagaaggggtgtacaccccctgctatattgggagtgatatcatcctctccgtccctggatattaggaacaatatcactagggagtgtacacttcctgc----------aatagtgagactaatatcatcctctcgccccctggatattaggaacaatatcacagggg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30803960 331 + 46535552 tcgggatattcggaacaatatcacagtgggtgtgtacaccccctgcgatattgccactagtatcatcgtctccctcccagtatataaggaacagtatcacaagggggtgtacaccccctgca------------------------------------------------atactggggataatatcttcctgtcccccgctggctattaggaacaatgtcccagaaggggtgtacaccccctgctctattgggagtgatatcatcctctccgtccctggatattaggaacaatatcactagggagtgtacacctccggc----------aatagtgaaactaatatcatcctctcgccccctggatattaggaacaatatcacagggg i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80494227 266 + 95678458 tctggatattcggaacaatatcacagtgggt---------------------------------------------------------------------------gtgtacaccccctgcg------------------------------------------------atattgggggtaatatcttcctctcccccactggctatgaggaacaatgtcacagaaggggtgtacaccccctgctctattggtagtgatatcatcctctctgtccctggatattaggaacaatatcactagggagtgtacacctcctgcgaaagaggatgatattgagactaatatcatcctctcgccccctggatattaggaaacatatcacggggg i rheMac3.chr10 C 0 I 19824 s macFas5.chr10 80907136 341 - 96509753 tctggatattcggaacaatatcacagtgggtgtgtacaccccctgcgatattgccaccagtatcatcgtctccctcccgggatataaggaacaatatcacaagggggtgtacaccccctgcg------------------------------------------------atattgggggtaatatcttcctctcccccactggctatgaggaacaatgtcacagaaggggtgtacaccccctgctctattggtagtgatatcatcctctctgtccctggatattaggaacaatatcactagggagtgtacacctcctgtgaaagaggatgatattgagactaatatcatcctctcgccccctggatattaggaaacatatcatggggg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76181852 341 + 90941950 TCTGGATATtcggaacaatatcacagtgggtgcgtacaccccctgcgatattgccACCAGTATCATCGTCTCCCTCCCaggatataaggaacaatatcacaagggggtgtataccccctgcg------------------------------------------------atattgggggTAATATCTTCCTCTCCCCCACTGGCTATGAGGAACAATGtcacagaaggggtgtacaccccctgctctattgggagtgatatcatcctctctgtccctggatattaggaacaatatcactagggagtgtacacctcctgcgaAAGAGGATGATATTGAGACTAATATCATCCTCTcgccccctggatattaggaaacATATCACGGGGG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18448994 336 + 33263144 tctggatattcggaacaatatcacagtgggtgtgtacactccctgcgatattgccaccagtatcatcgtctccctcccaggatataagaaacaatatcacaagggggtgtacaccccctgcg------------------------------------------------atattgggggtaatatcttcctctcccccactggctatgaggaacaatgtcacagaaggggtgtacaccccctgctctattggtagtgatatcatcctctctgtccctggatattaggaacaatatcactagggagtgtacacctcctgcgaaagaggatgatattgagactaatatcatcctctcgccccctggatattaggaaccatatcac----- i chlSab2.chr19 C 0 I 5 e calJac3.chr1 198198982 17 + 210400635 I e nomLeu3.chr7b 100373907 0 - 115148730 C a score=387761.000000 s hg38.chr22_KI270876v1_alt 6668 523 + 263666 tggtgtacaccccctgcaaaatcagaagaaatatcatcctctccaactttggatgttagggacaatatcatggggggaggtctccgccccctgcgatattgggggtcatatcatcctctcccacctaggatattaggaacaagatgaccga-agggatgtacacccactgcgatattttcaataatgtcatcctctaccccctggctattaggaagaacatcatagagcggtgtacactttctgtgatatcgggagtaata--------tcctctccagatatcaggaaAAGTTATATTAATTATTAATATTAATATATATAATAAAAATTAATACTAATCATCGA---TAATAATTACAATGAAGGGAGTAAAAACTAATCCTGGTTAAAAA-ATTAATGATTAGTATTAATAATTAATAGTAATGTCACTATTAATAATGAAGTAATGATATCAGTAATTAATCTTAATTAAATCAA---TAAGTGATGTTGCTAATAAAATAACAATTAATATTAAGTTTAATAACCAATATTAT-T s panTro4.chr22 34389283 525 + 49737984 tggtgtacaccccctgcaaaatcagaagaaatatcatcctctccaactttggatgttagggacaatatcac-gggggaggtctccaccccctgcgatattgggagtcatatcatcctctcccacctaggatattaggaataagatgaccga-agggatgtacacccactgcgatattttcaataatgtcatcctctaccccctggctattaggaagaacatcatagaggggtgtacgctttctgcgatatcgggagtaata---gcctctcctccccagatatcaggaaaaattatattaattattaatattaatatatataataaaaattaatactaatcatcgatattaataattacaatgaagtgagtaaaaactaatcctggttaaaaa---tattgattagtattaataattaatagtaatatcactattaataataaagtaatgatatcagtaattaatcttaattaaatcaa---taagtgatgttgctaataaaataata---aATATTAAGTTTAATAACCAATATTAT-T i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30804291 523 + 46535552 tggtgtacaccccctgcgaaatcagaagaaatatcatcctctccacctttggatgttagggacaatatcac-aggggaggtctccgccccctgtgatactgggagtcatatcatcctctcccacctacgatattaggaacaagatgaccga-agggatatacacccagtgcgatattttcaataatgtcatcctctacccgctggctattaggaagaacatcatagaggggtgtacactttctgtgatattgggagtaaca---tcctctcctccccagatatcaggaaaaatTatattaattattaatatta--atatataat-aaaattaatactaatcaccgatattaataattacaatac----agtaaaaactaatcctggttaaaaatattaatgattagtattaataattaatagtgatatcactattaataatgaaataatgatatcagtaattaatcttaattaaa-caa---taagtcatgttgctaataaaataataattcatattaagattaataatcaatattat-t i ponAbe2.chr22 C 0 C 0 s macFas5.chr10 80907477 444 - 96509753 aggtctatgccccctacgatattggaagtcatatcatcctctcccacccaggatataaggaaccagacaat-cgaagggatgtacacccactgcgatagtttcaagaatgtcatcctctacc-ccctggctactaggaat--aacaacatacaggggtgtacactttcagcg--------------------------------------------------------------------------atattgggagtcatatcatcctctcccccccggatatcaggaacaaGTCtattaattattaatattaataaatata---aaaattaatagtaataatcgatattaataatcacaatgaagatagtaaaaattaatactggttaaaaatgttaatgattagtat-------taatagtaatatcactattaataaaaaaataatgatatcagcaattattgttacttaaatcaatactaagtgatgttagtgataaaataataattaatattaag------aactaatattgt-- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76182193 443 + 90941950 AGGTCTATgccccctgcgatattggaagtcatatcatcctctcccacccaGGATATAAGGAACCAGACGAC-CGA-----------------------------------------------------------------------------AGGGATGTACACCCACTGCGATAGTTTCAAGAATGTCATCCTCTACCCCCTGGCTACTAGGAATAACAACATACAGGGGTGTACACTTTCAGCGATATTGGGAGTCACATCATCCTCTcccccccGGATATCAGGAACaagtctattaattattaatattaataaatata---aaaattaatagtaataatcgatattaataatcacaatgaagatagtaaaaattaatactggttaaaaatgttaacgattagtat-------taatagtaatatcactattaataaaaaa--aatgatatcaGCAATTATTGTTACTTAAATCAATACTAAGTGATgttagtaataaaataataattaatattaag------aactaatattgtt- i papAnu2.chr10 C 0 I 15483 s chlSab2.chr19 18449335 444 + 33263144 aggtctacgccccctgtgatattgga-----------------------------------------------------------------------------agtcatatcatcctctcccacccaggatataaggaaccagacgaccga-agggatgtacacccactgcgatagtttcaagaatgtcatcctctaccccctggctactaggaataacaacatacaggggtgtacactttcagcgatattgggaatcatatcatcctttcccccccggatatcaggaacaaGTCTATTAATTATTAATATTAATAAATATA---AAAATTAATAGTAATAATCGA---TAATAATCACAATGAAGATAGTAAAAATTAATACTGGTTAAAAATGTTAACGATTAGTGTTAA----TAATAGTAATATCACTATTAATAATAAAATAATGATGTCAGCAATTATTGTTACTTAAATCAATACTAAGTGATGTTAGTAATAAAATAATAATTAACATTAAG------GACTAATATTGT-- i chlSab2.chr19 I 5 C 0 e calJac3.chr1 198198982 17 + 210400635 I e rheMac3.chr10 80494493 19824 + 95678458 I e nomLeu3.chr7b 100373907 0 - 115148730 C a score=557195.000000 s hg38.chr22_KI270876v1_alt 7191 931 + 263666 GATAAATGACATTCATATCAATAATTAATTTTAATTGTGCATGATGATATATTTAAAA----TATCAA---TTAATAATCTTATACTATTAATTAATATTAACATTGATAATTATTATTAAAATTGATAATTGATGTTTAATAATTGATAATATtattactcctaatcccgcagggggtgtacacctac--ctgtgataatgttcctaatatccagggatgcagagcatgattttagttttaatatcgcagtgggtgtacactcaccccgtgacatcgatcctaatatacagggggtagagtatgacatgactgccaacatagcaatgaatgtacagccacctggtgatattgctcctaatattcacggaagaagcgtatgatattactcccaatatcgcagggagtgtacacctcttctgtgatattgttcctagcatcccgagggggagaggatgataataattccagtagcgcaggctgtgttcacccaccctgtgaaattgttattaatatcctggaagggagaggatgatattattccccatagagcgggaggtgttcacccaccctgtgatattgttattaatatcctagaaggg-agaggatgatat--------agagcaggaggtgcacacccaccctgggatattgttcctaatctccatggagggg--agaggcagatattactcccaatatggcaggggctgtatatccaccctgtgatattgttcttaatattcaaaggccgagaggttgatatcactcccaatatcgcagaaagtgtacagcc-ccgtgtgatactgttcctgatatccagaaggggagaagatgatattaatccccatatcgcaggaggtgaacac-ccactctgtgatatctttcctaatatgcagggggagagaggataatattattcccaatattgcagaagatgtacacg----cccc s panTro4.chr22 34389808 868 + 49737984 GATAAATGACATGCATATCAATAATTAATTTTAATCATGCATGATGatatatttaaaa---ttatcaatagttaataatcttatactattaattaatattaacattg---attattattaaaattgataattgatgtttaataattgataatattattactcctaatcccgcagggggtgtacacctac--ctgtgataatgttcctaatatccagggacgcagagcatgattttagttttaatatcgcagtgggtgtacactcacactgtgacatcgatcctaatatccagggggtagagtgtggcatgactcccaacatagcaatgaatgtacagccacccggtgatattgctccaaatattcacggaagaagagtatgatattactcccaatatcgcagggagtgtacacctcttctgtgatatttttcctagcatcccgagggggagaggatgataataattccagtagcgcaggctgtgttcacccaccctgtgaaattgttattaatatcctggaagggagaggatgatattactccccatagagcgggaggggt---------------------------------------------------------------------------acccccaccctggcatattgttcctaatctccatggagggg--agaggcagatattactcccaatatggcaggggctgtacatccaccctgtgatattgttcttaatattcaaaggccgagaggttgatgtcactcccaatatcgcagaaagtgtacagcc-ccgtgtgatactgttcctgatatccagaaggggagaagatgatattaatccccatatcacaggaggtgaacac-ccactctgtgatatctttcctaatatgcagggggagagaggataatattattcccaatattgcagaagatgtacacgcc--cccc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30804814 860 + 46535552 gataaatgacattcatatcaataatcaattttaatcgtgcatgatgatatatttaaaataattatcaataattaataatgttatactattaattaatattaacattg---aatattattaaaattgatagtTGATGTTTAATAATTGATAATATtattactcctaatcccgcagggggtgtacacctac--ctgtgataatgttcctaatatccagggatgcagagcatgattttagttttaatatcgcagtgggtgtacactcaccaggtgacatcgatcctaatatccagggggtagagtgtggcatgactcccaacatagcaatgaatgtacagccacatggtgatattgctccaaatattaacggaagaagcgtatgatattactcccaatatcgcagggagtgtacacctcttctgtgctattgttcctagtatcccgagggggagaggatgataataattccagtagcgcagactgtgttcacccaccctgtgatattgttattaatatcctggaagggagaggatgat----------atagaccaggaggtg---------------------------------------------------------------------------tacacccaccctgggatattgttcctaatctccatggagggg--agagacagatattactctcaatatggcaggagctgtttat---ccctgtgatattgttcttactattcaaaggccgacaggttgctgtcactcccaatatcgcagaaagtgtacagcc-ccgtgtgatactgttcctgatatccagaaggggagaagattatattaatccccatatcgcaggaggtgaacac-ccactctgtgatatctttcctaatatgcagggggagagaggataatattatccccaatattgcagaagatgtacacgccgtcccc i ponAbe2.chr22 C 0 C 0 s macFas5.chr10 80907921 883 - 96509753 --taaatgacattaatattattaatc--------------ataatcatatctttaaaa-tattatcaataattaatgatgtcatactattaattaatattatcattg---ataattattaaaatcaatcattgatgtttaataattaataATGTCAT-----------------------tacacctac--ctgtgacgttgttcctaatatccagggatggagagcatgattttagttttaatatcgccgtcggtgtacactcaccctgtgacatcgatcctaatatccagggggtagagtatgacatgactaacaacatagcaatgactggacagccacctggtgatatcactcctaatattcccggaagaagtctattctatgactcccaatatcgcagggagtgtgcagctcttctgtgatattgttcctagtatccggagggggagaggatgataataatt-------cgcaggctgtgttcaccggccctgtgatattgttattaatatcctggaagggagagggtgatattacactccgtacagcaggaagcgtacacacagcctgggatattgttcctgatatccatgaagggcacaggctgatattacttccaatacggcagagtgtacatccaccctgtgacattcttcttaatattcc---aaggccaagaggttgatattactctcagtatggcagacagtgtacattc-ccgtgtgatactcttcctgatatccggaaggggagaagatgatattaatccccctatcgcaggaggtgaacacccactctgtgatatctttcctcatatgcaggggaagagaggataatattattcccaatattgcagaagatgtacacgcccccgcgcaatattgtccttaatattccaaggcagagaagatgatgttactcccaatatcgcagaa------------------ i macFas5.chr10 C 0 C 0 s chlSab2.chr19 18449779 825 + 33263144 --TAAATGATATTAATATTAATAATTA-------------ATCATAATATCTTTAAAA-TATTATCAATAATTAATGATGTCATACTATTAATTAATATTATCATTG---ATAATTATTAAAATCGATCATTGATGTTTAATAATTAATAATGTCAT-----------------------TACACCTATTATtgtgatgttgttcctaatatccagggatggagagcatgattttagttttaatatcgtggccggtgtacactcaccctgtgacattgatcctaatatccagggggtagagtatgacatgactaacaacatagcaatgactggacagtcacccagtgatattgctcctaatattcccggaagaagcctattctatgactcccaatatcgcagggagtgtgcagctcttctgtgatattgttcctagtatccggagggggagaggatgataataatt-------cacaggctgtgttcacccgccctgtgatattgttattaatatcctggaagggagagggtgacattacactctgtacagcaggaagcgtacacacagcctgg---------------------------------------------------------------------------gaaattgttcctaatatccatggagggc--acaggctgatattacttccaatacggcagagggtggacatccaccctgtgacattcttcttaatattccaaggccaagaggttgatattactcccagtatggcagacagcgtacatcc-ccatgtaatactcttcctgatatccggaaggggagaagatgatattaatccccctatcgcaggaggtgaacac-ccactctgtgatatctttcctcatatgcaggggaagagaggataatattattcccaatattgcagaagatgtacacg----cccc i chlSab2.chr19 C 0 I 22 e calJac3.chr1 198198982 17 + 210400635 I e rheMac3.chr10 80494493 19824 + 95678458 I e papAnu2.chr10 76182636 15483 + 90941950 I e nomLeu3.chr7b 100373907 0 - 115148730 C a score=9913.000000 s hg38.chr22_KI270876v1_alt 8122 40 + 263666 ctccacccgcccgtgatactgtccttcatgtccttctcag s panTro4.chr22 34390676 40 + 49737984 ccccatccgcccgtgatattgtccttcatgtccttctcag i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30805674 40 + 46535552 ccgcccccgcccgtgatattgtccttcatgtccttctcag i ponAbe2.chr22 C 0 C 0 e calJac3.chr1 198198982 17 + 210400635 I e rheMac3.chr10 80494493 19824 + 95678458 I e papAnu2.chr10 76182636 15483 + 90941950 I e macFas5.chr10 80908804 0 - 96509753 C e chlSab2.chr19 18450604 22 + 33263144 I e nomLeu3.chr7b 100373907 0 - 115148730 C a score=133729.000000 s hg38.chr22_KI270876v1_alt 8162 183 + 263666 tccaaggcagagaagatg------------atatcgcagaaagtgtacaccccccagtgatattgttcccatgatccaggagggaagaagatgatattactttcccatatcgcagggggtgtacacgcctccagtgataccgttcctaatttccacgtgggagaggatgatattactcccaatatcgcaggggtt s panTro4.chr22 34390716 183 + 49737984 tccaaggcagagaagatg------------atatcgcagaaagtgtacaccccccagtgatattgttcccatgatccaggagggaagaggacgatattactttcccatatcgcagggggtgtacacgcccccagtgataccgttcctaatttccacgtgggagaggatgatattactctcaatatcacaggggtt i panTro4.chr22 C 0 I 1400 s ponAbe2.chr22 30805714 183 + 46535552 tccaaggcagagaagatg------------atatcgcagaaagtgtacaccccccagtgatattgttcccatgatccaggagggaagaagatgatattactttcccatatcgcaggtggtgtacacgcccccagtgataccgttcctaatttccacgtgggagaggatgatattactcccaatatcgcaggggtt i ponAbe2.chr22 C 0 C 0 s macFas5.chr10 80908804 153 - 96509753 -----------------------------------------agtgtacgccccacagtgatgttgttcccatgatccggaagggaagaggatgatactactttcgaa-atggcagggggtgtatacgccaccagtgatactgttcctaatttccacgtggaagaggatgatactactcccaatatcgcagaggtt i macFas5.chr10 C 0 C 0 s chlSab2.chr19 18450626 194 + 33263144 tccaaggcagagaagacgatgttactcccaatatcgcagaaagtgtacaccccccagtgatgttgttcccatgatctgggagggaagaggatgatactactttcaaa-atggtagggggtgtatatgcctccggtgatactgttcctaatttccacgtgggagaggatgatattactcccaatatcatagaggtt i chlSab2.chr19 I 22 C 0 e calJac3.chr1 198198982 17 + 210400635 I e rheMac3.chr10 80494493 19824 + 95678458 I e papAnu2.chr10 76182636 15483 + 90941950 I e nomLeu3.chr7b 100373907 0 - 115148730 C a score=258244.000000 s hg38.chr22_KI270876v1_alt 8345 520 + 263666 ataaacactcctttgatattgtttctaatatcca-ggggggagag---gatggtattcctccctatattgcagagggtgcacacccgtctttgatattgttcgtgatttctagaggtggagatgatattactcacaaaatcgtaaacacgctgtgtgtccaccgtggatcctaatatccagggagggatattactccccatatagggggcgggggtgcacccagcctgtcatattgtttcttatgtccggggaggagaggatgatattgctaccaatatcgaagaagtgtacacgccccctgtgatatggttcctaatatccgcgttgggagaggatgacattactctcaatatcacaggggttgtaaaccccgcctgtgatatttttcctactatccagaataagagagaatgatattactcccaatagtgcaggcgatgtaccacccccccccatgtgatattgttctcaagagctaaaggaagagaagagaatattattctctgtactgcagggggtgtac s ponAbe2.chr22 30805897 519 + 46535552 ataaacactcctttgatattgttcctaatatccagggggggagag---gatgatattcctccctatgttgcagagggtgcacacccgtctttgatattgttcgtaatttctagagggggagatgatattactcagaaaatcgtaaacacgctgtgtgtccacggtggatcctaatatccagggagggatattactccccatatcgggggcgggggtgcacccagcctgtcgtattgtttcttatgtccagggaggagaggatgatattgctaccaatatcgaagaagtgtacacgccccctgtgatatggttcctaatatccacgttgggagaggatgatattactctcaatatcacaggggttgtacaccccgcctgtgatatttttcctactatccagaataagagagaatgatattactcccaatagtgcagggggtgtac--ccccccaccatgtgatattgttctcaagagctaaaggaagagaagagaatattattctctgtactgcagggggtggac i ponAbe2.chr22 C 0 C 0 s macFas5.chr10 80908957 519 - 96509753 ataaacactcctttgatattgttcctaatatccg-ggggggagaggatgatgatattcctccctatattgcagagggtgtacacccgtctttgatactgttcgtaatgtctagagggggagatgatattactcacaaaatcgtaaacacgctgtgtgtccaccgtggatcctaatatccagggagggatagtactccccaagtcgcggg-gggtgtccaccccgcctgtcacattgtttcttatacccagggaggagaggatgatgtcgctactaatatcgaagaagtgtacacgccccctgtgatatggttcctaatatccatgttgggagaggatgatattactctcaatatcacaggggttgtccatcccacctgtgatatttttcctactatccagaataagagagaatgatattactcccaatagtgcagggggtgta---ccccccgccatgtgatattgttctcaaggggtaaaggaagagaagataatattattccttgtactgcagggggtgtac i macFas5.chr10 C 0 C 0 s chlSab2.chr19 18450820 519 + 33263144 ataaacactcctttgatattgttcctaatatccg-ggggggagaggatgatgatattccttcctatattgcagagggtgtacacccatctttgataccgttcataatgtctagagggggagatgatattactcacaaaatcgtaaacacgctgtgtgtccaccgtggatcctaatatccagggagggatagtactccccaagttgcggg-tggtgtccaccctgcctgtcacattgtttcttatacccagggaggagaggatgatgtcgctactaatatcgaagaagtgtacacgccccctgtgatatgcttcctaatatctacgttgggagaggatgatattactctcaatatcacaggggttgtccatcccacctgtgatatttttcctactatccagaataagagagaatgatattactcccaatagtgcagggggtata---ccccccgccatgtgatattgttctcaaggggtaaaggaagagaagataatattattccttgtactgcagggggtgtac i chlSab2.chr19 C 0 I 13752 e calJac3.chr1 198198982 17 + 210400635 I e rheMac3.chr10 80494493 19824 + 95678458 I e panTro4.chr22 34390899 1400 + 49737984 I e papAnu2.chr10 76182636 15483 + 90941950 I e nomLeu3.chr7b 100373907 0 - 115148730 C a score=745.000000 s hg38.chr22_KI270876v1_alt 8865 4 + 263666 accc s ponAbe2.chr22 30806416 4 + 46535552 accc i ponAbe2.chr22 C 0 C 0 s macFas5.chr10 80909476 4 - 96509753 tccc i macFas5.chr10 C 0 I 27193 e calJac3.chr1 198198982 17 + 210400635 I e rheMac3.chr10 80494493 19824 + 95678458 I e panTro4.chr22 34390899 1400 + 49737984 I e papAnu2.chr10 76182636 15483 + 90941950 I e chlSab2.chr19 18451339 13752 + 33263144 I e nomLeu3.chr7b 100373907 0 - 115148730 C a score=16105.000000 s hg38.chr22_KI270876v1_alt 8869 195 + 263666 acctgtgatactgttcctaatatccagggaggtagagcatgagattacccccaatatcgccgtgggtgtacacccactatgtgatattgctcctaatatccagggggtagagtaggacattactcccaatataacagtgggtgtacatccacccggag------------atattcagggaagccgaaaatgatattactcccaata s ponAbe2.chr22 30806420 206 + 46535552 acctgtgatactgttcctaatacccagggagggagagcatgagattacccccgatatcgccgtgggtgtacacccactttgtgatattgctcctaatatcca-ggggtagagcaggacattactcccgatacaacagtgggtgtacatccacccggagatattgctcctaatattcagggaagccgaaaatgatattactcccagta i ponAbe2.chr22 C 0 I 52 e calJac3.chr1 198198982 17 + 210400635 I e rheMac3.chr10 80494493 19824 + 95678458 I e panTro4.chr22 34390899 1400 + 49737984 I e papAnu2.chr10 76182636 15483 + 90941950 I e macFas5.chr10 80909480 27193 - 96509753 I e chlSab2.chr19 18451339 13752 + 33263144 I e nomLeu3.chr7b 100373907 0 - 115148730 C a score=0.000000 s hg38.chr22_KI270876v1_alt 9064 6 + 263666 ccgcag e calJac3.chr1 198198982 17 + 210400635 I e ponAbe2.chr22 30806626 52 + 46535552 I e rheMac3.chr10 80494493 19824 + 95678458 I e panTro4.chr22 34390899 1400 + 49737984 I e papAnu2.chr10 76182636 15483 + 90941950 I e macFas5.chr10 80909480 27193 - 96509753 I e chlSab2.chr19 18451339 13752 + 33263144 I e nomLeu3.chr7b 100373907 0 - 115148730 C a score=61350.000000 s hg38.chr22_KI270876v1_alt 9070 719 + 263666 agagtgtacaacccttctgtgatattgttcctagtatccggagggggagaggatgatattactttcaatatcgcaggctgtgtacacccatcctgtgatattgtccctaaaatgcaggaagggagaggaccgcattactttccatagagtaggaggtgtacacccacgctgggattttgttcctaatatcaagggggagacagcgtaatattac-cccaatatggcagggggtgtacatcccccctgagatattgttcttgccattcagaacaggagaggatgacattactccagatatggaagaaagtgtaaacccccgtgtgatattgtttctaatatctagaaagaaagaaaaggatattaatccccatatcgcaggaggtgtacacccactctgatatttatccaaatatgcagaggggaaagaggataataatattcccaatatcgcaagggttctacaaccccatgtgagatggtccttcataatattccaaggcaaaggggatgatattaccacatatatcgcagaaaacgtacaccgcccaaggatattattcccatgatcctggagggaagaggatgatattactttaaatatcacagaaggtgtacaagccgccactgatattgtttctaatttcaacgtggaagaggaggatgtgacacccaatattgcagggagtagaaac-agtcc-tgtgatactgttcttaatattc s ponAbe2.chr22 30806678 720 + 46535552 agagtgtacaacccttctgtgatattgttcctagtatccggagggggagaggatgatattactttcaatatcgcaggctctgtacacccaccctgtgatattgtccctcaaatccaggaagggagaggacggcattactttccatagagtaggaggtgtacacccacgctgggattttgttcctaatatcaagggggagacagcgtaatattactcccaatatggcagggggtgtacatcccctctgagatatcgttcttgccattcagaacaggagaggatgacattactccagatatcgaagaaagtgtaaacccccgtgtgatattgtttctaatatccagaaaggaagaaaaggatattaatccccatatcgcaggaggtgtacacccactctgata-ttatccaaatatgcaggggggaaagaggataataatattcccaatatcgcaagggttctacaaccccacgtgagatggtccttcataata-tccaaggcacaggggatgatattaccacatatattgcagaaagagtacaccgcccaaggatattgttcccatgatcctggagggaagaggttgatgttactttaaatatcacagaaggtgtacaagccaccagtgatattgtttttaattgcaacgtgggagaggaggatatgacacccaatatcgcagggagtagaaactagtctatgagatactgttcttaatattc i ponAbe2.chr22 I 52 I 30 e calJac3.chr1 198198982 17 + 210400635 I e rheMac3.chr10 80494493 19824 + 95678458 I e panTro4.chr22 34390899 1400 + 49737984 I e papAnu2.chr10 76182636 15483 + 90941950 I e macFas5.chr10 80909480 27193 - 96509753 I e chlSab2.chr19 18451339 13752 + 33263144 I e nomLeu3.chr7b 100373907 0 - 115148730 C a score=0.000000 s hg38.chr22_KI270876v1_alt 9789 2730 + 263666 agggaggacgaggacgatgttactcccaatagagacggatgtacaaggtctgtgcaccgatggtgtacactcgtctgtgaaatagatcataatttccagaggcggagatgatattactcacgatatcgtagacaggctgtgagtccactaatgtggaccgtaatagccagggcgggagggggggtggctattcctccccgcatcgcggtgggtgcctcaaccccctgcaatgggggtcctaagagcaagggggggagaggggctggctgttactccccgcatcgcaggaggtgtgtacaacccctgcgatattgagagtaatgtcatcctctcccccggaatataagaaacaatatcacaggaggatgtacaccccctgcgatattggaagtagcatgattttctccccctcgggatattcggaaaaatatcacagtgggtgtgtacagcccctgcgacattgccgctagtatcttcctctccctcccaggatataagggacaaggtcaccagggggtgtacacccactgcgatattggctgtaatatcttcccctccccctctgccctttaggaaaaatgtcacagaagggttgtacaccccctgctatattgggagtgatatcatcctctccgcccgtggatattaggaacaatatccctagggagtgtacacctcctgcaatattcagactaatatcatcctctcgcagcctggatattaagatcaatatcacaggggtggtgtgcacccccggcgaaattggaagaaatatcatgctctccacctttgaatgttagggacagtatcacgggggaggtctccgccccctgtgatattgggagtcatatcatccgctcccacccaggatattaggaacgagatgaccgaagggatgtatgcccactgcgatattttcaataatgtcatcctctgccccctgactattaggagtaacatcacagaggggtgtacactttctgcgatattgggagtaatattctctcctccaccgatatcgggaacagtTatattaattattaatattaataaatataatagcaattaatagtaatcatcgatattaataattacagtagagacagtaaaacagtacggattaaaaatattaacgattactattaataattaatagcaatattattaataaaataatgatatcagtaattaatgttacttcaatcaatcataagtgatgttggtaataaaacaataattaatattaagattaataactaatattaaaagtgacattaataataattaattttaatcatgcacaatcatatcttgaaaataatcaatgattaataatgttatactattaattaatattaccattgataattattaataaGACTGATGTTTAataattcataatattattattcctaataccgcagggggtgtacgcctacctgtgatattgttcctaatatccagggacggagagcatgatattagttttcatatcgcagtaggtgtacactcacccggtgacaccgatcctaatatccagcaggtagagtatgacatgactgccaacatagcaatgaatgtacagccacccggtgagatatctcctaatattcacggaagaagcgtatgatattactcccaatatcgcagggagtgtacacctcttctgtgatattgttcctagtatcccgagggggagaggatgataataattccagtagcgcaggctgtgttcacgcaccctgtgaaattgttattaatatcctcaaagggagaggatattactccccataatagatagatattactccccatactagagcaggaggtcacaccctgtgatattcttcgtaacattcagaggccgagaggttgataatactcccaatatcgcaggaagggtacacccccgtgtgagatggtgcttaataatattccaaggcggagggggtgatatgacaacatatatggcaggaagtgtacaccccccagggatattgttcccatgatcctggagggaagaggatgatattactttccatatcacagaaggtggacacgcccccactgatattgtttctaactgcaacgtgggacatgaggatatgacacgcgatatcgcagggagtagaaacacccccgtgatactgttcttaatattcagggatgaagaggatgatattactcccaatacagacgggtgtacacccgtcagtgaaacagttcataatttccagatggggagatgatattactcacaataccgtaaaaacgctgtgagtccaccgcgggtcctaaaaaccaggggggcgagaggggctggctcttactccccgcatcgcggggggtgcctggatttgaagaacaatatccctgatgttgggaggtggagtatatgacgaacaatatcactgggtgcgtgtacaccccctgctatattgggtgtagtatcatcctctcttccctaggatattaaatacaatatcacaggaggggtgtacatcccctgtgatattgggcataatgtcatcgtctcccaacgtggatattgggaataatgtcacaggggggtgtacacctccttccatattgggagtaatatcatcctctcccctcaggattgtaggcaaaatatcgaaggggttttacaactcgtgcgatatgggcagtaatatcatcctctccccacctagatattaggaactatgtcacaggagactgtacacttct e calJac3.chr1 198198982 17 + 210400635 I e ponAbe2.chr22 30807398 30 + 46535552 I e rheMac3.chr10 80494493 19824 + 95678458 I e panTro4.chr22 34390899 1400 + 49737984 I e papAnu2.chr10 76182636 15483 + 90941950 I e macFas5.chr10 80909480 27193 - 96509753 I e chlSab2.chr19 18451339 13752 + 33263144 I e nomLeu3.chr7b 100373907 0 - 115148730 C a score=120039.000000 s hg38.chr22_KI270876v1_alt 12519 1650 + 263666 tgcgatattgggagtaatatcatcctctcccatcatggatattaagaagaatattacaagggaggtgtacaccccctgcgatatggagagtaatagtatgctctcccttt-gggatattaggaacaatatcacagaaggtgtgtacaacccctgtggtattgggagtcatatcatcctctcccccg-actataagaaaaaataccacaggaggatgtacaccccctgcgatattgggagtaatatcattttctccccctcgggatattcggaacaatatcacagtgggtgtgtacaccccctgcgatattgccactagtatcatcgtctccctgccagcatataaggaacagtatcacaagggggtgtacaccccctgcgatattggggataatatcttcctctcccccgctggctattaggagcaatgtcccagaaggggtgtgcaccccctgctctattgggagtgatatcatcctctctgtccctggatattaggaacaatatcactagggagtgtacacctcctgcaatagtgagactaatatcatcctcttgccccctggatattaggaacaatatcacaggggtggtgtacaacccctgcaaaatcagaagaactatcatcctctccaactttggatgttagggacaatatcacgggggaggtctgcgccccctgcgatattgggggtcatatcatcctctcccacccagaatattaggaacaagatgaccgaagggatgtacacccactgcgatattttcaataatgtcatcctctacaccctggctatttggaagaacatcatagaggggtgtacactttctgcgatattgggagtaatatcctctcctccccggatatcaggaaaaatTATATTAATTATTAATATTAATATATATAATAAAAATTAATACTAATCGCCGATATTAATAATTACAATAAAGGGAGTAAAAACTAATGCTGGTTAAAAATATTAAAGATTGGTATTAATAATTAATAGTAATGTCACTATTAATAATGAAGTAATGATATCAGTAATTAATCTTAATTAAATCAAT---AAGTGATGTTGCTAATAAAATAATAATTAATATT--GTTTAATAACCAATATTATTGATAAATGGCATTCATATCAATAATTAATTTTAATCGTGCATGATGACATATTTAAAATAATTATCAATAATTAATAATCTTATACTATTAATTAATATTAACATTGATAATTATTATTAAAATTGATAATTGATGTTTAATAATTGATAATATtattactcctaatccctca-ggggtgtacacctacctgtgatattgttcctagtatccagggacggagagcatgatttcagttttaatatcgcagtgggtgtacactcaccctgtgacatcgatcctaatatacagggggtagagtatgacatgactgccaacatagcaatgaatgtacagccacctggtgatattgctccaaatattcacggaagaagcgtatgatattactcccaatatcgcagggagtgtacacctcttctgcgatatttttcctagcatcccgagggggagaggatgataataattccagtagcgcaggctgtgttcacccaccctgtgatattgttagtaatatcctggaagggagaggatgatat s panTro4.chr22 34392299 1630 + 49737984 tgcgatattgggagtaatatcatcctctcccatcatggatatcaagaacaatattacaaaggaggggtacaccccctgcgatatggagagcaatagtatggtctccccttcgggatattaggaacaatatcgcagaaggtgtgtagaacccctgcggtattgggagtcatatcatcctctcccccggaatataagaaacaatatcacaggaggatgtacaccccctgcgatattggaagtagcatgattttctccccctcgggatatttggaacaatatcacagtgggtgt-tacagcccctgcgacattgccgctagtatcatcctctccctcccaggatataagggacaaggtcaccagggggtgtacacccactgcgatattggctgtaatatcttcccctccccctctgccctttaggaaaaatgtcacagaagggttgtacaccccctgctatattgggagtgatatcatcctctccgcccgtggatattaggaacaatatccctagggagtgtacacctcctgcaatattcagactaatatcatcctctcgcagcctggatattaagatcaatatcacgggggtggtgtgcacccccggcgaaattggaagaaatatcatgctctccacctttgaatgttagggacagtatcacgggggaggtctccgccccctgtgatattgggagtcatatcatccgctcccacccaggatattaggaacgagatgaccgaagggatgtatgcccactgcgatattttcaataatgtcatcctctgccccctgactattaggagtaacatcatagaggggtgtacactttctgcgatattgggagtaatattctctcctccaccgatatcgggaacagttatattaattattaatattaataaatataataG----CAATAGTAATCATCGATATTAATAATTAAAGTAGAGACAGTAAAACTTAGTATGGATtaaaaatattaacgattactattaacaattaatagcaat------attattaataaaataatgatatcagtaattaatgttacttcaatcaatcataagtgatgttggtaataaaacaataattaatattaagattaataactaatattaa----aagtgacatt------aataatTAATTTTAATCATGCACAATCATATCTTGAAAATAATCATTAATGATTAATAATGTTATACTATTAATTAATATTACCATTGATAATTATTAATAA-------GACTGATGTTTAataattcataatattattattcctaataccgcagggggtgtacgcctacctgtgatattgttcctaatatccagggacggagagcatgatattagttttcatatcgcagtaggtgtacactcacccggtgacaccgatcctaatatccagcgggtagagtatgacatgactgccaacatagcaatgaatgtacagccacccggtgagatatctcctaatattcacggaagaagcgtatgatattactcccaatatcgcagggagtgtacacctcttctgtgatattgttcctagtatcccgagggggagaggatgataataattccagtagcgcaggctgtgttcacccagcctgtgaaattgttattaatatcctgaaagggagaggatgatat i panTro4.chr22 I 1400 I 567 e calJac3.chr1 198198982 17 + 210400635 I e ponAbe2.chr22 30807398 30 + 46535552 I e rheMac3.chr10 80494493 19824 + 95678458 I e papAnu2.chr10 76182636 15483 + 90941950 I e macFas5.chr10 80909480 27193 - 96509753 I e chlSab2.chr19 18451339 13752 + 33263144 I e nomLeu3.chr7b 100373907 0 - 115148730 C a score=0.000000 s hg38.chr22_KI270876v1_alt 14169 1495 + 263666 agagcaggaggtgcacacccaccctgggatattgttcctaatctccatggaggggagaggcagatattactcccaatatggcaggggctgtatatccaccctgtgatattgttcttaatatccaaaggccgagaggttgatatcactcccaatatcgcagaaagtgtacagccccgtgtgatactgttcctgatatccagaaggggagaagatgatattaatccccatatcgcaggaggtgaacacccactctgtgatatccttcctaatatgcagggggagagaggataatattattcccaatattgcagaagatgtacacgcccccccccccacccgcccgtgatattgtccttcatgtccttctcagtccaaggcagggaagatggtatcgcagaaagtgtacacccccagtgatattgttcccatgatccaggagggaagaggatgatattactttcccatatcgcagggggtgtacatgcccccagtgataccgttcctaatttccacgtgggagaggatgatattactctcaatatcacaggggttgtataccccgcctgtgatatttttcctactatccagaataagagagaatgatattactcccaatagtgcaggtggtgtacccccccaccttccaccatgtgatattgttctcaagagctaaagaaagagaagagaatattattctctgtactgcaggtggtgtacacccacctgtgatactgttcttaatatccagggagggaagagcatgagattaccctcaatatcgccgtgggtgtacacccactatgtgatattgctcctaatatccagggggtagagtaggacattactcccaatataacagtgggtgtacatccacccggagatattgctcctaatattcagggaagccgaaaatgatgttactcccaataccgcagagagtgtacaacccttctgtgatactgttcctagtatccggagggggagaggatgatattactttcaatatcgcaggctgtgtacacccatcctgtgatattgtccctaaaatgcaggaagggagaggaccgcattactttccatagagtaggaggtgtacacccacgctgggattttgttcctaatatcaagggggagacagcgtaatattaccccaatatggcagggggtgtacatcccccctgagatattgttcttgccattcagaacaggagaggatgacattactccagatatggaagaaagtgtaaacccccgtgtgatattgtttctaatatccagaaagaaagaaaaggatattaatccccatatcgcaggaggtgtacacccactctgatatttatccaaatatgcagaggggaaagaggataataatattcccaatatcgcaagggttctgcaaccccatgtgagatggtccttcataatattccaaggcaaaggggatgatattaccacatatatcgcagaaaacgtacaccgcccaaggatattattc e calJac3.chr1 198198982 17 + 210400635 I e ponAbe2.chr22 30807398 30 + 46535552 I e rheMac3.chr10 80494493 19824 + 95678458 I e panTro4.chr22 34393929 567 + 49737984 I e papAnu2.chr10 76182636 15483 + 90941950 I e macFas5.chr10 80909480 27193 - 96509753 I e chlSab2.chr19 18451339 13752 + 33263144 I e nomLeu3.chr7b 100373907 0 - 115148730 C a score=150362.000000 s hg38.chr22_KI270876v1_alt 15664 1779 + 263666 ccatgatcctggagggaagaggatgatattactttaaatatcacagaaggtgtacaagccgccactgatattgtttctaatttcaacgtggaagaggaggatgtgacacccaatattgcagggagtagaaacagtcctgtgatactgttcttaatattcagggaggacgaggacgatgttactcccaatagagacggatgtacaaggtctgtgcaccgatggtgtacactcgtctgtgaaatagatcataatttccagaggcggagatgatattactcacgatatcgtagacaggctgtgagtccactaatgtgggccgtaatagccagggcgggaggggg--------------------------------------------------------------------ggtggctattcctccccgcatcgcgaggggcggcctcatccccctgcgatgtgtaccgtaatagccaggggggcagggggtggctattgctccccatatcatcacccccctgcgatgtATATCCATTATTAGCGGtct---ttttccccgatattcggaacaatttcatggggtttgcctacatagcctgagatatgaaaactgatatcatcctctgcacctccggatattaggaactatatcacacaatgggtgtacactttttgtgagatttgggctaatctcttcctgtgtttccctgaatattcggagaaatatcacagggcggatgtccttccactactctcttgggaggagcatcgtactttacctactggaaattgggagcaatatcgcagatgggctgtcaagccactgtcatatttgaaataatatcatgctctcccccaccagttatgaggaacaatatcacaggagtgtatgtaccttctccggtattgggagtaatatcatcatctcttccttcagatgatagggactatatcacagggtgggtgtacaccccgtgtatttttggaagcaatgtcattctctgttcttccagattttaagattcatctcacaggcggggtgtacaccccttgttatatctgatgtaatctcatcctctttcaacctgtatatttagaacaatatcccatgggggctgtacatctcttcaatattggtagtaataccatcttctcctttcctggatataagaaacaatatcacaggaggggtgtacaccccttgcaatattgggagtattatcacctctccccatgtggttattaaggacaaaatcccagggtggctgtacagttcctacgttattgggagtaatatcatccactcaccccctggatatcaggaaccatatcacagaagaggtgtacacccccttcgatattgtcagcaatgtcatcctcttcccacttggatattaggaacactaccccggggttgggggcggtgtacacccactgcaatatcgaaagtaatatcagcctctttcccgctggatattaggaactgtatcacaggtgtatgtgtgcaccttctgggatattgggagtaatatcagcctctaccccgctgcatattacaaacaatatatggggggcaaggcggttacaccccctgcgatattgagagtcatattattctcttttccctgtacattaggaactatatcagaggggtctgtacaccttctgtggtattgggatgaatgttatcctctcccccactgaatagcaaaaacaatatcacagaagggtgtacaccccttgcgatatagccagtaatatcatcgtctctacttttggatactaggaacaacatcacagagggtgtgtacatcccctgcaatattgggcataatgttatcctctcttcc s ponAbe2.chr22 30807428 1841 + 46535552 ccatgatcctggaggga-gagc-tgatgttactttaa-tatcacagaaggtgtaca-gccaccagtgatat-gtttctaatg-caacgtgga-gaggaggatatgacacccaatatcgcagggagtagaaacagtcctgtgatactgttcttaatattcagggaggaaaaggacgatattactcccaatagagacggatgtacaaggtctgtacaccgatggtgtacaccggtctgtgaactagatcataatttacagagggggagatgctattactcacgatatcgtaaacaggctgtgagtccactaatctgcaccgcaatagccagggcgggagggggagtggctatgatgcggggaggcctcacacccctgcgatgtgggctgcaatagccgggcgggcagagggggtggctattgctccccgcatcg--agggggtacctcaccccgctgcgatgtggaccgtaatagccaggggggcagggggtggctattgctccccatatcaTCACCCCCCTGCGATGTATGTCCATTATTAGCGGTCtcttttttccccgatattcagaacaatttcatggggtttgcctacatagcctgagatatgaaaactgataccatcctctgcacctccggatattaggaactatatcacacaatgggtgtacacttcttgcgagatctgggctaacttcttcctgtgtttccctgaatattcggagaaatatcacagggcggatgtccttcccctactctcttgggaggagcatcgtactttacctactggaaattgggagcaatatcgcagacgggctgtcaagccactgtcatatttgaaataatatcatgctctcccccaccagttatgaggaacaatatcacaggagagtatgtaccttctccggtattgggagtaatatcatcatctcttcctttagatgatagggacaatatcacagggtgggtgtacaccccgtgtatttttggaagcaatgtcattctctgttcttccagattttaaaattcatcttacaggcggggtgtacacctcttgttatattggatgtaatctcatcctctttcaacctgtatatttagaacaatatcccatgggggctgtacatctcttcaatattggtagtaataccatcttctcctttcctggatataagaaacaatatcacaggaggggtgtacaccccttgcaatattgggagtattatcacctctccctatgtggttattaaggagaaaatcccagggtggctgtacagttcctacgttattgggagtaatatcatccactcaccccctggataacaggaaccatatcacagaagaggtgtacacccccttcgatattgtcagcaatgtcatcctcttcccacctggatattaggaacaataccctggggttgggggcggtgtacacccactgcaatatcgaaagtaatatcagcctctttcctgcgggatattaggaactgtatcacaggtgtgtgtgtgcaccttctgggatattgggaataatatcagcctctaccccgctgcatattaggaacaatatacggggggccaggcggttacacctcctgcgatattgagagtcatattattctcttttccctgtacattaggaactatatcagaggagtctgtacaccttctgcggtattgggatgaatgttatcctctcccccactgaatatcaaaaacaatatcacagaaaggtgtacaccccctgcgatgtagccagtaatatcaccgtctctacctttggatactaggaacaacatcacagagggtgtgtacatcccctgcgatcttgggcataatgttatcctctcttcc i ponAbe2.chr22 I 30 C 0 e calJac3.chr1 198198982 17 + 210400635 I e rheMac3.chr10 80494493 19824 + 95678458 I e panTro4.chr22 34393929 567 + 49737984 I e papAnu2.chr10 76182636 15483 + 90941950 I e macFas5.chr10 80909480 27193 - 96509753 I e chlSab2.chr19 18451339 13752 + 33263144 I e nomLeu3.chr7b 100373907 0 - 115148730 C a score=168655.000000 s hg38.chr22_KI270876v1_alt 17443 642 + 263666 cctggatatgaggaacaatatccctggttggggtggggggtggagtacattacgaacaatatcactgggtgcgtgtacaccccctgctatattgggtgtagtatcatcctctcttccctaggatattaagaacaatatcacaggaggggtgtacatcccctgtgatattgggcataatgtcatcgtctcccaacgtggatattgggaacaatgtcacaggggggtgtacacctccttccatatcgggagtaatatcatcctctcccctcaggattgtaggcaaaatatcgaaggggttttacaactcgtgcgatatgggcagtaatatcatcctctccccacctagacattaggaactatgtcacaggcgactgtacacttcttgcgatattgggagtaatatcatcctctcccatcatggatattaagaagaatattacaaaggaggtgtacaccccctgcgatatggagagtaatagtatgctctccccttcaggatattaggaacaatatcgcaggaggtgtgtagaacccctgcgatattgggagtcatatcatcctctccccctgaatataagaaacaatatcacaggaggatgtacaccccctgcgatattgggagtaatatcattttctccccct s panTro4.chr22 34394496 639 + 49737984 cctggatttgaagaacaatatccctgat---gttgggaggtggagtatatgacgaacaatatcactgggtgcgtgtacaccccctgcgatattgggtgtagtatcatcctctcttccctaggatattaaatacaatatcacaggaggggtgtacatccccggtgatattgggcgtaatgtcatcgtctcccaacttggatattggggataatgtcacaggggggtgtacacctccttccatattgggagtaatatcatcctctcccctcaggattgtaggcaaaatatcgaaggggtcttacaactcgtgcgatatgggcagtaatatcatcctctccccacctagacattaggaactatgtcacaggcgactgtacacttcttgcgatattgggagtaatatcatcctctcccatcatggatattaagaagaatattacaagggaggtgtacaccccctgcgatatggagagcaatagtatgctctccccttcgggatattaggaacaatatcgcaggaggtgtgtagaacccctgcggtattgggagtcatatcatcctctccccctgaatataagaaacaatatcacaggaggatgtacaccccctgcgatattgggagtaatatcgttttctccccct i panTro4.chr22 I 567 C 0 s ponAbe2.chr22 30809269 639 + 46535552 cctggatatgaggaacaatatccctggt---ggggggaggtggagtacattacgaacaatgttactgggtgcgtgtacaccctctgctatattgcatttagtatcatcctctcttccctaggatattaagaacaatatcacaggaggggtgtacatcccctgtgatattgggcgtaatgtcatcatctcccaacgtggatattgggaataatgtcacaggggagtgtacaccttcttccatactgggagtaatatcatcctctcccCTCAGGATTGTAGGCAAAATATCgaaggggttttacaactcgtgcgatatggccagtaatatcatcctctccccacctagatattaggaactatgtcacaggcgactgtacacttcttgcgatattgggagtaatatcaacctctcccatcatggatattaagaacaatattacaaaagaggtgtacaccccctgtgatatggagagtaatagtatgctctcccctttgggatattaggaacaatatcacaggaggtgtgtagaacccctgcgatattgggagtcatatcatcctctccccctgaatataagaaacaatatcacaggaggatgtacaccccctgcgatattgggagtaatatcattttctccccct i ponAbe2.chr22 C 0 C 0 e calJac3.chr1 198198982 17 + 210400635 I e rheMac3.chr10 80494493 19824 + 95678458 I e papAnu2.chr10 76182636 15483 + 90941950 I e macFas5.chr10 80909480 27193 - 96509753 I e chlSab2.chr19 18451339 13752 + 33263144 I e nomLeu3.chr7b 100373907 0 - 115148730 C a score=21153.000000 s hg38.chr22_KI270876v1_alt 18085 42 + 263666 cgggatattcggaacaatatcacagtgggtgtgtataccccc s panTro4.chr22 34395135 42 + 49737984 cgggatattcggcacaatatcacagtgggtgtgtacaccccc i panTro4.chr22 C 0 I 4520 s ponAbe2.chr22 30809908 42 + 46535552 cgggatattcggaacaatatcacagtgggtgtgtacaccacc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100373907 42 - 115148730 ctggatattcggaacaatatcacagtggctgtgtacaccccc i nomLeu3.chr7b C 0 C 0 e calJac3.chr1 198198982 17 + 210400635 I e rheMac3.chr10 80494493 19824 + 95678458 I e papAnu2.chr10 76182636 15483 + 90941950 I e macFas5.chr10 80909480 27193 - 96509753 I e chlSab2.chr19 18451339 13752 + 33263144 I a score=49744.000000 s hg38.chr22_KI270876v1_alt 18127 100 + 263666 tgcgatactgccactagtatcatcgtctccctcccagcatataaggaacagtatcacaagggggtgtaca-cccctgcgatgttaggggtaatatctttct s panTro4.chr22 34399697 97 + 49737984 tgcgatattgccactagtatcatcgtctccc---cagcatataaggaacagtatcacaagggggtgtaca-cccctgcgatattaggggtaatatctttct i panTro4.chr22 I 4520 C 0 s ponAbe2.chr22 30809950 101 + 46535552 tgcgatattgccactagtatcgccgtctccctcccagcatataaggaacagtatcacaagggggtgtacaccccctgcgatattgggggtaatatctttct i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100373949 101 - 115148730 tgcaatattgccactagtatcatcgtctccctcccagcatataaggaacagtatcacaagggcgtgcacaccccctgcgatattgggggtaatatctttct i nomLeu3.chr7b C 0 C 0 e calJac3.chr1 198198982 17 + 210400635 I e rheMac3.chr10 80494493 19824 + 95678458 I e papAnu2.chr10 76182636 15483 + 90941950 I e macFas5.chr10 80909480 27193 - 96509753 I e chlSab2.chr19 18451339 13752 + 33263144 I a score=95478.000000 s hg38.chr22_KI270876v1_alt 18227 122 + 263666 GAGAAAGGCTTAGAATTGGCAATAAAACTACAACCACGACCAAAATAATACTGATGCTATCTCAGAATTACCTTgcattttacctgtgttaacttgtttagccctccaacaaattgctgagt-- s panTro4.chr22 34399794 122 + 49737984 GAAAAAGGCTTAGAATTGGCAATAAAACTACAACCACGACCAAAACAATACTGATGCTATCTCAGAATTACCTTgcattttacctgtgttaactcgtttagccctccaacaaattgctgagt-- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30810051 122 + 46535552 GAGAAAGGCTTAGAATTGGCAATAAAACTACAACCACGACCAAAACAATACTGATGCTATTTCAGAATTACCTTgcattttacctgtgttaactcgtttagccctccaacaaattgctgagt-- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100374050 122 - 115148730 GAGAAAGGCTTAGAATTGGCAGTAAAACAACAACCACGACCAAAACAATACTGACGCTATCTCAGAATTACCTTGCATTTTACCTGTGTTAACTCGTTTAGCCCTCCAACAGATTGCTGAgt-- i nomLeu3.chr7b C 0 I 1 s calJac3.chr1 198198999 124 + 210400635 GAGAAAGGCTCGGAATTGGCAATAAAACAGCAACCACGACCAAAGCAAGATGGATGCCATCGCACAATTACATTGTAGTTTACCGGTGTTAACTCATTTAGCCCTTGAACAAGTTGCCGAGGCC i calJac3.chr1 I 17 C 0 e rheMac3.chr10 80494493 19824 + 95678458 I e papAnu2.chr10 76182636 15483 + 90941950 I e macFas5.chr10 80909480 27193 - 96509753 I e chlSab2.chr19 18451339 13752 + 33263144 I a score=79530.000000 s hg38.chr22_KI270876v1_alt 18349 226 + 263666 tgtcctcccattttaaagctgagCACGAATTAGTGGACCATCCCCTTCCAGAACTGAGGCTTTGTGGCTTGGGTCG-CCAGTGGA-GCAGCCCAGTGTCTGGCTGCAGCGAGCCTCTGCTTCGATGCTTGGCCCTGCCAAGGCGGTGGAGCCGGTCG-GTGAAAATAGCTGCACACTGGCTG--CCCAATGTCCACCTC--ACTC-TTCTCCTCTGTGTATATCCTAGGCGTAC s panTro4.chr22 34399916 226 + 49737984 tgtcctcccattttaaagctgagCACGAATTAGTGGACCATCCCCTTCCAGAACTGAGGTTTTGTGGCTTGGGTCG-CCAGTGGC-GCAGCCCAGTGTCTGGCTGCAGCGAGCCTCTGCTTGGATGCTTGGCCCTGCCAAGGCGGTGGAGCCGGTCG-TTGAAAATAGCTGCACACTGGCTG--CCCAATGTCCACCTC--ACTC-TTCTCCTCTGTGTATATCCTAGGCGTAC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30810173 232 + 46535552 tgtcctcccattttaaagctgagCACGAATTAGTGGACCATCTCCTTCCAGAACTGAGGCTTTGTGGCTTGGGTCGCCCAGGGGCGGCAGCCCAGTGTCTGGCTGCAGCAAGCCTCTGCTTGGGTGCTTGGCCCTGCCAAGGCGGTGGAGCTTTTAGTGGGAAAATAGCTGCACACTGGCTG--CCCAATGTCCCCCTCTTATTCGTTCTCCTCTGTGTCTATCCTAGGCGTAC i ponAbe2.chr22 C 0 I 1004 s calJac3.chr1 198199123 189 + 210400635 CCTTTTCCCATTGTGAAGCTAAGCATGAGCAAGTGGACCATCCTCTTCCAGCACCGAGGCTTTGTGGCTTGGGCAG-CCAGGGGC--AGGCCC-------------------------------------GCTCTGCC-AGGCGGTGGCGCCGGTTA-GTGAGCACAGATGCGCGCAGGCTGCCCCCAGTGTCCACCTT--GCTA-TTCTCCTCTGTGTATATCCTAGGTCCAC i calJac3.chr1 C 0 C 0 e rheMac3.chr10 80494493 19824 + 95678458 I e papAnu2.chr10 76182636 15483 + 90941950 I e macFas5.chr10 80909480 27193 - 96509753 I e chlSab2.chr19 18451339 13752 + 33263144 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=227730.000000 s hg38.chr22_KI270876v1_alt 18575 999 + 263666 CGTGGATTCACCTTCACCATCCTCTGAGCCCTGGGTGGCTGCACCAACTGGCCCTTCCACGGCACTGTGTCTGCTCACAGGTGTCCCAGGAACAGCCATTTCATAGAGCAGTTGGGCTCCTATGGTCCACTGCCCAACAGTCATTAAGAGCAACTCGTTCCCCTCAACCTGGAGAGGATCCGGCATTGGGTTGGCTGTGGGGCCC------------GCCTATGGAAAAGCTTCTCGGTCTTTCTGGCTTTTTTCCCCTGCATTCTATGCTGACCACAACTGCTGAGTGACTGCAAAGAAAACAGGCACATGAAGTTCTCTTAGCTTTTCAGAAAACAGATACAAAGGCTATAGGAACAGAAGTGAGTTCACTTCAGTGAGCAGAGCAGTGGGAACAAGACCAAGGGCTTCTCAAAATGCTTCTGCAGAGATCTTAATTTTGTTAGATTTAGAGGTCAATAAATGGAGTTTTCTGAGTCACTCGTGCTCTTCTGGCCTGGCCTGAGCAGGGCCCAGGGCAAGATTTACTTTTGTCTGACATAGAGCTGGGTCTTGGTACTAATGAGCTTTTTCAGACTTTGACTTGGGAAAGGCAGTGGCTATAAGCAGGATTGGACTTTTGGGTGGGGCCCTGGGTCTCTTGGACGAATTTACAATCTATTGCCTTCCAAGACTTTCTTCTTCAAAG-CCCCAGTCAGACTGTTCATGGCCCATCCAAATCTTTCTATAACATTCATGGTCATCCCATAGCCCAAGG---AGTTA-CTTGCTTATTGATTTTGTCATTGGAAACTGTATTGTTTTGCTTAACACATATCCTTAAATTTACAAAGGTAGATTTGTTATGAAAATTGCTTTGGGGCTGTCATAACCTACCTTTCAAGAATGAGAAACTTggcgaggtgcagtggctcacacctgtaaatccagcaccttgggaggccgaattgagaggattgcttgagcccaggagtttgagatcagcctgggcagcatggcacaaaaccctggctc---- s panTro4.chr22 34400142 999 + 49737984 CGTGGATTCAGCTTCACCATCCTCTGGGACCTGGGTGGCTGCACCAACTGGCCCTTCCACGGCACTGTGTCTGCTCACAGGTGTCCCAGGAACAGCCATTGCATAGAGCAGTTGGGCTCCTATGGTCCACTGTCCAACAGTCATTGAGAGCAACTCGTTCCCCTCAACCTGGAGAGGATCCGGCATTGGGTTGGCTGTGGGGCCC------------GCCTATGGAAAAGCTTCTCGGTCTTTCTGGCTTTTTTCCCCTGCATTCTATGCTGACCACAAATGCTGAGTGACTGCAAAGAAAACAGGCACATGAAGTTCTCTTAGCTTTTCAGAAAACAGATACAAAGGCTATAGGAACAGAAGTGAGTTCACTTCAGTGAGCAGAGCAGTGGGAACAAGACCAAGGGCTTCTCAAAATGCTTCTGCAGAGATCTTAATTTTGTTAGATTTAGAGGTCAATAAATGGAGTATTCTGAGTCACTCGTGCTCTTCTGGCCTGGCCTGAGCAGGGCCCAGGGCAAGATTTACTTTTGTCTGACATAGAGCTGGGTCTTGGTACTAATGAGCTTTTTCAGACTTTGACTTGGGAAAGGCAGTGGCTATGAGCAGGATTGGACTTTTGGGTGGGGCCCTGGGTCTCTTGGACGAATTTACAATCTATTGCCTTCCAAGACTTTCTTCTTCAAAG-CCCCAGTCAGACTGTTCATGGCCCACCCAAATCTTTCTATAACATTCATGGTCATCCCACAGCCCAAGG---AGTTA-CTTGCTTATTGATTTTGTCATTGGAAACTGTATTCTTTTGCTTAACACATATTCTTAAATTTACAAAGGTAGATTTGTTATGAAAATTGCTTTGGGGCTGTCATAACCTACCTTTCAAGAATGAGAAACTTggcgaggtgcagtggctcacacctgtaaatccagcaccttgggaggccgaattgagaggattgcttgagcccaggagtttgagatcagcctgggcagcatggcacaaaaccctggctc---- i panTro4.chr22 C 0 C 0 s calJac3.chr1 198199312 996 + 210400635 CACGGAGGCCACGTCACCATCCATTGGGCCCTGGGTGGCAGCACCAATGGGTCCTTCCACTGCACTATGGCTGCTCACAGGTGTCCCGGGAAGA-------------------GGACACCCAAGATCCACCGCCCAGCAGTCATGGAGAATAACCCCTTGCCCTCAACCTGGAGAGGGTCCAGCATTGGATTGGCTGTGGGGTGCCCATCTCTCAAAGCCTATGGAAAAGCTTCCGGGTCTTTCTGGCTTTTCT-CCCTGCATTCCATGATGACCACAGATATGGAGAGACTGCAGAGAAAACAGGCACATGATGCCCTCTTAGCTTCTCAGAAAACGGATACAGAGGCCATAGAAACACAAGTGAGTTCACTTCAGCAGGTGGAGCAGTGGGAACAAGACCGAGGACGTCTCAAAACACCTGTGCAGGGATCTTAATTGTGTTAGATGTAGAGGGGGATAAATGGAGTTTTCTGAGTCACCCGTGCTCTTCTGGCCTGGCCTGAGCAAGGCCCAGGGCAAGATTTATTTTTGTCTGACATAGAGCTGGGTCTTGGTGCTAATGACCTTTTTCAGGCTTTGACTTGGGAAAAACAGTGGCTGTGAGGAGGACTGGACTTTGGGGTTGGGCCCTGGGTCTCTCAGACAAATTTACCATCTATTGCCTTCCAAGACTTTCTTCTTCAAAGCCCCCAGCCAGACTGTCCATGGCCCCTCCAAATCTTTCTATAATGTTCATGGACATCCCACAACCCCAAGGACAGTTACCTTGCTTATTGATTTTGTAACTGGAAACTATATTGTTTTGCTTAACACGTGTTCTTAAATTTACAAAGGTAGACTTGTTATGAAAATTGCTTTGGGGCTGTAAAAACCTACCTTTCAAGAATGAGAAACTTGGc-aggtgcaatggctcccacctgtaaatccagcactagggtaggccaaggtg-gaggattgcttgagcctgggagttcgagatcagcctgggcagcatgg--caaaaccctagctagctc i calJac3.chr1 C 0 C 0 e ponAbe2.chr22 30810405 1004 + 46535552 I e rheMac3.chr10 80494493 19824 + 95678458 I e papAnu2.chr10 76182636 15483 + 90941950 I e macFas5.chr10 80909480 27193 - 96509753 I e chlSab2.chr19 18451339 13752 + 33263144 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=4570.000000 s hg38.chr22_KI270876v1_alt 19574 4 + 263666 taca s panTro4.chr22 34401141 4 + 49737984 taca i panTro4.chr22 C 0 C 0 s rheMac3.chr10 80514317 4 + 95678458 TACA i rheMac3.chr10 I 19824 C 0 s macFas5.chr10 80936673 4 - 96509753 TACA i macFas5.chr10 I 27193 C 0 s chlSab2.chr19 18465091 4 + 33263144 TACA i chlSab2.chr19 I 13752 C 0 s calJac3.chr1 198200308 4 + 210400635 tacc i calJac3.chr1 C 0 C 0 e ponAbe2.chr22 30810405 1004 + 46535552 I e papAnu2.chr10 76182636 15483 + 90941950 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=884297.000000 s hg38.chr22_KI270876v1_alt 19578 500 + 263666 -aaaaa---atacaaaaattagctgagggtggtggcgcacggccgtggtcccagctacccgggaggctgaggcaagaggatcacttgagtttgggaggttgaggctgcagtgaaccaagatcacaccactgcactccagcctgggtgat------agagtgagaccctgtctc------------aaaaaaaaaaCCAGAAGCTGGAAGAAAACTAATAttgcaaagcacttacatagatccgaggccttttacatgcaaggttatttgtgaggattataaggtatcataaaggcaggtagggttagctccattttacagatggagaagctgaggcttagaggtgaaaacttgcccagcaatacaggattcagaccccaataggcctacctggaaagcccttcccaacatattatgctgttcATAGAGGGAAAA-GATGAGCAAAGAATGGGGACTTTTCAAGAATTCACTTAGAATGTCAATGATAGAATCATGTGTGGGTATCTTGAGTTTGGCAATATAA s panTro4.chr22 34401145 498 + 49737984 -aaaaa---atacaaaaattagctgagggtggtggcgcacgcccatggtcccagctacccgggaggctgaggcaagaggatcacttgagtttgggaggttgaggctgcagtgaaccaagatcacaccactgcactccagcctgggtgat------agagtgagaccctgtctc--------------aaaaaaaaCCAGAAGCTGGAAGAAAACTAATAttgcaaagcacttacatagatccgaggccttttacatgcaaggttatttgtgaggattataaggtatcataaaggcaggtagggttagctccattttacagatggagaagctgaggcttagaggtgaaaacttgcccagcaatacaggattcagaccccaataggcctacctggaaagcccttcccaacatattatgctgttcATAGAGGGAAAA-GATGAGCAAAGAATGGGGACTTTTCAAGAATTCACTTAGAATGTCAATGATAGAATCATGTGTGGGTATCTTGAGTTTGGCAATATAA i panTro4.chr22 C 0 C 0 s rheMac3.chr10 80514321 498 + 95678458 -aaaaa---atacaaaaattagctgagggtggtggtgcacgcctgtggtcccagctacctgggaggctgaggcaggagggtcacttgagtttgggaggttgaggctgcagtgaaccaagatcacaccactgtactccagcctgggcgat------agagggagaccttgtctc--------------aaaacaaaCGAGAAGCTGGAAGAAAATGAATATTGCAAAGCACTTACATAGATCTGAGGCCTTTTACACGCAAGGTTATTTGTGAGGATTATGAGATATCATAAaggcaggtagggttagctccattttacagatggagaagctgaggcttagaggtgaaaacttgccctgcaattcaggattcagaccccagtaagcctacctgaaaagcccttcccagcatattatgttgtccGTAGAGGGAAAA-GATGAGCAAAGAATGGGGACTTTTCAAGAATTCATGTAGAATGTCAATGATCGAGTCATGTGTGGGTATCTTGAGTCTGGCAGTATAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80936677 498 - 96509753 -aaaaa---atacaaaaattagctgagggtggtggtgcacgcctgtggtcccagctatctgggaggctgaggcaggagggtcacttgagtttgggaggttgaggctgcagtgaaccaagatcacaccactgtactccagcctgggcgat------agagggagaccttgtctc--------------aaaacaaaCGAGAAGCTGGAAGAAAATGAATATTGCAAAGCACTTACATAGATCTGAGGCCTTTTACACGCAAGGTTATTTGTGAGGATTATGAGATATCATAaaggcaggtagggttagctccattttacagatggagaagctgaggcttagaggtgaaaacttgccctgcaatacaggattcagaccccagtaagcctacctgaaaagcccttcccagcatattatgttgtccGTAGAGGGAAAA-GATGAGCAAAGAATGGGGACTTTTCAAGAATTCATGTAGAATGTCAATGATCGAGTCATGTGTGGGTATCTTGAGTCTGGCAGTATAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76198119 498 + 90941950 -aaaaa---atacaaaaattagctgagggtggtggtgcacgcctgtggtcccagctacctgggaggctgaggcaggaggatcacttgagtttgggaggttgaggctgcagtgaaccaagatcacaccactgtactccagcctgggcgat------agagggagaccttgtctc--------------aaaatgaACGAGAAGctggaagaaaatgaatattgCAAAGCACTTACATAGATCTGAGGCCTTTTACATGCAAGGTTATTTGTGAGGATTATGAGATATCATAAAGGCAGGTAGggttagctccattttacagatggagaagctgaggctTAGAGGTGAAAACTTGCCCTGCAATACAGGATTCAGACCCCAGTAAGCCTACCTGAAAAGCCCTTCCCAGCATATTATGTTGTCCGTAGAGGGAAAA-GATGAGCAAAGAATGGGGACTTTTCAAGAATTCATGTAGAATGTCAATGATCGAGTCATGTGTAGGTATCTTGAGTCTGGCAATATAA i papAnu2.chr10 I 15483 C 0 s chlSab2.chr19 18465095 497 + 33263144 -aaaaa---atacaaaaattagctgagggtggtggcgcacgcctgtggtcccagctacctgggaggctgaggctggaggatcacttgagtttgggaggttgaggctgcagtgaaccaagatcgcaccactgtactccagcctgggcgac------agagggagaccttgtctc--------------aaaGCAAACGAGAAGCTGGAAGAAAATGAATATTGCAAAGCACTTACATAGATCTGAGGCCTTTTACATGCAAGGTTATTTGTGAGGATTATGAGATATCATAaaggcaggtagggttagctccattttacagatggagaagctgaggcttagaggtgaaaacttgccctgcaatacaggattcagaccccagtaagcctacctggaaagcccttcccagcatattatgttgtccATAGAGGGAAAA-GATGAGCAAAGAATGAGGACTTTTCAAGTATTCATGTA-AATATCAATGATCGAATCATGTGTGGGTATCTTGAGTTTGGCAATATAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198200312 523 + 210400635 aaaaaacatatagaaaaatcagctgagtgtggtggtgcacgcctgtggtcccagctacccaggaggctgaggcaggaggatcacttgagtttaggaatttgaagctgctgtgaaccaagatcacaccactgcactccagcctgggtgatggagcgagagtgagaccctgtctcaaaaaaaaaaaaaaaaaaagaaTGAGAAGCTGGAAGAAAACTAATATTGCAAAGCACTTACATAGATCCTAGGACTTTTACATGGAAAGTAATTAGTGAGGATTATAAGGTATCATGaaggcaggtagggttagctccatttcacagatggagaagctgaggcttagaggtggaaccctgcccaGCGATACAGGATTCAGACTCCAGTAGGCCTACCTGGAAAGCCCTTCCCCACATATTATGTTGTCTGTAGAGGGAAAAGGATAAGCAAAGAATGGGGACTTTTCAAGAATTCACTTAGAATGTCAATGATAGAATCATGTGTGGGTATCTTGAGTCTGGCAGTATAA i calJac3.chr1 C 0 C 0 e ponAbe2.chr22 30810405 1004 + 46535552 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=150025.000000 s hg38.chr22_KI270876v1_alt 20078 115 + 263666 ATGACTAATTGTGCAGAAGCAAAATATCACATTTCCTGCTCCAGCAGAACTGCAGGATTCTCCAAACACAAGCGTGACTCACATGGTTGGAGTGCACACTCTGGATAATATAGAT s panTro4.chr22 34401643 115 + 49737984 ATGACTAATTGTGCAGAAGCAAAATATCACATTTCCTGCTCCAGCAGAACTGCAGGATTCTCCAAACACAAGCGTGACTCACATGGTTGGAGCGCACACTCTGGATAATATAGAT i panTro4.chr22 C 0 C 0 s rheMac3.chr10 80514819 113 + 95678458 ATGACTAGTTGTGCAGAAGCAAAATACCACATTTCCTGCTCCAGCAGAACTGCAGGATTCTCCAACCACAAGCATGACT--CATGGTTGGAGTGCACACTCTGGATAATATAGAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80937175 113 - 96509753 ATGACTAGTTGTGCAGAAGCAAAATACCACATTTCCTGCTCCAGCAGAACTGCAGGATTCTCCAACCACAAGCATGACT--CATGGTTGGAGTGCACACTCTGGATAATATAGAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76198617 113 + 90941950 ATGACTAGTTGTGCAGAAGCAAAATACCACATTTCCTGCTCCAGCAGAACTGCAGGATTCTCCAACCACAAGCATGACT--CATGGTTGGAGTGCACACTCTGGATAATATAGAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18465592 113 + 33263144 ATGACTAGTTGTGCGGAAGCAAAATATCACATTTCCTGCTCCAGCAGAACTGTAGGATTCTCTAACCACAAGCATGACT--CATGGTTGGAGTGCACACTCTGGATAATATAGAT i chlSab2.chr19 C 0 C 0 e calJac3.chr1 198200835 0 + 210400635 C e ponAbe2.chr22 30810405 1004 + 46535552 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=60448.000000 s hg38.chr22_KI270876v1_alt 20193 34 + 263666 TTCAAATTCCGGCATATGATGAAGATATGAGAAA s panTro4.chr22 34401758 34 + 49737984 TTCAAATTCCGGCATATGATGAAGATATGAGAAA i panTro4.chr22 C 0 C 0 s rheMac3.chr10 80514932 34 + 95678458 TTCAAATTCCAGCATATGATGAAGATATGAGAAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80937288 34 - 96509753 TTCAAATTCCAGCATATGATGAAGATATGAGAAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76198730 34 + 90941950 TTCAAATTCCAGCGTATGATGAAGATATGAGAAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18465705 34 + 33263144 TTCAAATTCCAGCATATGATGAAGATATGGGAAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198200835 34 + 210400635 TTCAAATTCTGGCATGTGATGAAGATACAGGAAA i calJac3.chr1 C 0 C 0 e ponAbe2.chr22 30810405 1004 + 46535552 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=542965.000000 s hg38.chr22_KI270876v1_alt 20227 434 + 263666 TTTACTTAtttatttatt--ttgagacagggtctcgctctgttacccaggctgggatgcagtgacatgatcttggctcactgcaacctccacctcccgggttcaagtgatcctcctgcctcagcctccctagtaactgggattataggagcccaccaccacgtctggctaatttttgtatttttagtagagatgaggtttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatccaactatctcggcctcccaaagtgttgggattacaggcgtgagccaccgcgcccagtcAGATAAGGGAAATTTATACAGGAGGTTATAAAGCCTTAACAATGTTCCAACATATTTTCTGGGTTTCCTGTTCTGAGAACAATTAGCAACCATCTCAAATTATGGGGTCACCAAAGCTCCCCAGTTTTGCTG s panTro4.chr22 34401792 434 + 49737984 TTTACTTAtttatttatt--ttgagacagggtctcactctgttacccaggctgggatgcagtgacatgatcttggctcactgcaacctccacctcccgggttcaagtgatcctcctgcctcagcctccctagtaactgggattacaggagcccaccaccacgtctggctaatttttgtatttttagtagagatgaggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacctatctcggcctcccaaagtgttgggattacaggcgtgagccaccgcagccagtcAGATAAGGGAAATTTATACAGGAGGTTATAAAGCCTTATCAATGTTCCAACTTATTTTCTGGGTTTCCTGTTCTGAGAACAATTAGCAACCATCTCAAATTATGTGGTCACCAAAGCTCCCCAGTTTTGCTG i panTro4.chr22 C 0 C 0 s rheMac3.chr10 80514966 434 + 95678458 TGTAGTTATTTACTTAtttattgaggcagggtctcgctctgctacccaggctgggatgcagtggcatgatcacccctcactgcaacctccacctcccgggttcaagtgatcctcctgcctcagcctccccagtaact-ggattacaggagcccaccaccaagcccagctgatttttgtatttttagtagaggtgaggtttcactatgttggccaggctggtcttgaactcccgacctcaggtgatccacccatcttggcctcccaaagtgctgggatgacaggtgtgagccaccgtgcccggccAGATAAGGGAAATTTATACAGGAGGTTATAAAGCCTTATCGATGTTCCAACTTATTTTCTGGGTTTCATGTTCTGAGAACAGTTACCAACCATCTCAAATTCTGGGGTCATC-AAGCTCCACAGTTTTGTTG i rheMac3.chr10 C 0 I 138 s macFas5.chr10 80937322 434 - 96509753 TGTAGTTATTTACTTAtttattgaggcagggtctcgctctgctacccaggctgggatgcagtggcatgatcacacctcactgcaacctccacctcccgggttcaagtgatcctcctgcctcagcctccctagtaact-ggattacaggagcccaccaccacgcccagctgatttttgtatttttagtagaggtgaggtttcaccatgttggccaggctggtcttgaactcccgacctcaggtgatccacccatcttggcctcccaaagtgctgggatgacaggtgtgagccaccgtgcccggccAGATAAGGGAAATTTATACAGGAGGTTATAAAGCCTTATCGATGTTCCAACTTATTTTCTGGGTTTCATGTTCTGAGAACAGTTACCAACCATCTCAAATTCTGGGGTCATC-AAGCTCCACAGTTTTGTTG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76198764 425 + 90941950 TGtagttatttacttatttattgaggcagggtctcgctttgttacccaggctgggatgcagtggcatgatctcacctcactgcaacctccacctcccaggttcaagtgatcctcctgcctcagcctccctagtaact-ggattacaggagcccaccaccacgcccagctgatttttgtgtttttagtagaggtgaggtttcaccatgttggccaggctggtcttgaactcccgacctcaggtgatccacctatctcggcctcccaaagtgctgggattacaggt----------gtgcccagCCAGATAAGGGAAATTTATACAGGAGGTTATAAAGCCTTATCGATGTTCCAACTTATTTTCTGGGTTTCATGTTCTGAGAACAATTACCAACCGTCTCAAATTCTGGGGTCATCAAAGCTCCGCAGTTTTGTTG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18465739 435 + 33263144 CGTAGTTATTTACTTAtttattgaggcagggtctcgctctgttacccaggctgggatgcagtgacatgatctcacctcactgcaacctccacctcccgggttcaagtgatcctcctgcctcagcctccttaataact-ggattacaggagcccaccaccatgcccagctgatttttgtatttttagtagaggtgaggtttcaccatgttggccaggctggtctcgaactcccgacctcaggtgatccacctatctcggcctcccaaagtgctgggattacaggtgtgagccactgtgcccagccAGATAAGGGAAATTTATACAGGAGGTTATAAAGCCTTATCGATGTTCCAACTTATTTTCTGGGTTTCATGTTCTGAGAACAATTACCAACTGTCTCAAATTCTGGGGTCATCAAAGCTCCACAGTTTTGTTG i chlSab2.chr19 C 0 C 0 e calJac3.chr1 198200869 0 + 210400635 C e ponAbe2.chr22 30810405 1004 + 46535552 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=873.000000 s hg38.chr22_KI270876v1_alt 20661 3 + 263666 CTG s panTro4.chr22 34402226 3 + 49737984 CTG i panTro4.chr22 C 0 C 0 s chlSab2.chr19 18466174 3 + 33263144 CTG i chlSab2.chr19 C 0 I 73 e calJac3.chr1 198200869 0 + 210400635 C e ponAbe2.chr22 30810405 1004 + 46535552 I e rheMac3.chr10 80515400 138 + 95678458 I e papAnu2.chr10 76199189 0 + 90941950 C e macFas5.chr10 80937756 0 - 96509753 C e nomLeu3.chr7b 100374172 1 - 115148730 I a score=60721.000000 s hg38.chr22_KI270876v1_alt 20664 140 + 263666 GTTGGCCTCTGGTTGCTTCGAGAC----------tttttttttttttcct---------gtctcgctctgtcgcccaagctggagtgcagtggtgtgatctcagctcactgcaagatctgcctcccaggttcacgccattctcctacctcagcctcccg s panTro4.chr22 34402229 143 + 49737984 GTTGGCCTCTGCTTGCTTCGAGAC-------ttttttttttttttttcct---------gtctcgctctgtcgcccaagctggagtgcagtggtgtgatctcagctcactgcaagatctgcctcccaggttcacgccattctcctgcctcagcctcccg i panTro4.chr22 C 0 C 0 s macFas5.chr10 80937756 151 - 96509753 --------CTGCTTGCTTCCAGACtttttttttttttttttttttttttttgagacggagtctcactctgtcactcaagctcgagtacagtggtgcgacctcggctcactgcaagctctgcctcctgggttcacgccattctcctgcctcagcctcccc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76199189 144 + 90941950 --------CTGCTTgcttccagac-------ttttttttttttttttttttgagacggagtctcgctgtgtcacccaagctggagtgcagtggcgcaacctcagctcactgcaagctctgcctcccggattcacgccattctcctgcctcagcctcccc i papAnu2.chr10 C 0 C 0 e calJac3.chr1 198200869 0 + 210400635 C e ponAbe2.chr22 30810405 1004 + 46535552 I e rheMac3.chr10 80515400 138 + 95678458 I e chlSab2.chr19 18466177 73 + 33263144 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=29592.000000 s hg38.chr22_KI270876v1_alt 20804 51 + 263666 agcagctgggactacacgcgcctgccaccacgcccagctaatttttttttt s panTro4.chr22 34402372 45 + 49737984 agcagctgggactacacatgcctgccaccacgcccagctaa------tttt i panTro4.chr22 C 0 C 0 s rheMac3.chr10 80515538 41 + 95678458 agcagctgggactacaggcacccgccaccacgcctggcTAA---------- i rheMac3.chr10 I 138 C 0 s macFas5.chr10 80937907 41 - 96509753 agcagctgggactacaggcacccgccaccacgcctggctaa---------- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76199333 41 + 90941950 agcagcagggactacaggcacccgccaccacgcccggctaa---------- i papAnu2.chr10 C 0 C 0 e calJac3.chr1 198200869 0 + 210400635 C e ponAbe2.chr22 30810405 1004 + 46535552 I e chlSab2.chr19 18466177 73 + 33263144 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=586677.000000 s hg38.chr22_KI270876v1_alt 20855 456 + 263666 tttttttttttttttttCTGAGTGAGAGTCTTActcactttgttgcccagtctggagtgcagtggtgtgatcttggctcactgaaacctccgcctcccaggttcaagtgattctcctgcctcagcctcctgattagctaggactacaggcgtgcaccaccatgcccagctaatttttgtatttttggtagaaacggggtttcgccatgttagccaggctggtctctaactcctgatgtcaagtgatctgcctgtctccgtctcccaaagtgctgggattacaggcgtgacccaccacacccagccTCTTCAAGGAGACTTTGAAGCCTCTGGAGAGG-ACCTACAGGGCCCAGTTTGGACATGAGCATCTCCAGCCCAGGGAAGGGCTCAGTGAAGAAACCCCACTGAGCATGGGCCAGTCCCCCAAGGTGGTGCAGCTCTGTGGATTTCTCCTGGG s panTro4.chr22 34402417 457 + 49737984 tttttttttttttttttctgagtgagagtcttattcactttgctgcccaggctggagtgcagtggtgtgatctcagctcaccgaaacctccgcctcccaggttcaagtgattctcctgcctcagcctcctgattagctaggactacaggcgtgcaccaccatgcccagctaatttttgtatttttggtagaaacggggtttcgccatgttagccaggctggtctcgaactcctgatgtcaagtgatctgcctgtctctgtctcccaaagtgctgggattacaggcgtgagccaccacacccagccTCTTCAAGGAGACTTTGAAGCCTCTGGAGAGGCACCTACAGGGCCCAGTTTGGACATGAGCATGGCCAGCCCAGGGAAGGGCTCAGTGAAGAAACCCCACTGAGCATGGGCCAGTCCCCCAAGGTGGTGCAGCTCTGTGGATTTCTCCTGGG i panTro4.chr22 C 0 C 0 s rheMac3.chr10 80515579 449 + 95678458 --------tttttttttctgagagagtgtctcactcactttgtcgcccaggctggagtgcagtggcgtgatcttggctcagtgaaacctccacctcccaggttcaagtgattctcctgcctcagcttcctgattagctgggactacaggcttgcaccaccatgcccagctaatttttgtatttttggtagaaacgggatttcaccatgttagccagactggtctcgaactcctgatgtcaagtgatgtgcctgtttccgtctccccaagtgctgagattacaggtgtgagccactgcgcccggccTCTTCAAGGAGACTTTGAAGCCTCTGGAGAGGCACCTGCAGGTCCCAGTTTGGACATGAGCATCTCCAGCCCAGAGAGGGTCTCAGTAAAGAAACCCCGCTGAGGATGGGCCAGCACCCCCAGGTGATGCAACTCCGTGGGTTTCTCCTGGG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80937948 449 - 96509753 --------tttttttttctgagagagtgtctcactcactttgtcgcccaggctggagtgcagtggcgtgatcttggctcagtgaaacctccacctcccaggttcaagtgattctcctgcctcagcttcctgattagctgggactacaggcttgcaccaccatgcccagctaatttttgtatttttggtagaaacgggatttcaccatgttagccagactggtctcgaactcctgatgtcaagtgatgtgcctgtttccgtctccccaagtgctgagattacaggtgtgagccactgcgcccggccTCTTCAAGGAGACTTTGAAGCCTCTGGAGAGGCACCTGCAGGTCCCAGTTTGGACATGAGCATCTCCAGCCCAGAGAGGGTCTCAGTAAAGAAACCCCGCTGAGGATGGGCCAGCACCCCCAGGTGATGCAACTCCGTGGGTTTCTCCTGGG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76199374 456 + 90941950 -ttttttttttttttttctgagagagagtctcattcactttgtcgcccaggctggagtgcagtggcgtgatcttggctcagtgaaacctccacctcccaggttcaagtgattctcctgcctcagcttcctgattagctgggactacaggcttgcaccaccatgcccagctaatttttgtatttttggtagaaacgggatttcaccatgttagccagactggtcttgaactcctgatgtcaagtgatgtgcctgtttccgtctccccaagtgctgagattacaggtgtgagccactgcgcccggcctcttcaaggagacttTGAAGCCTCTGGAGAGGCACCTGCAGGTCCCAGTTTGGACATGAGCATCTCCAGCCCAGAGAGGGTCTCAGTAAAGAAACCCCGCTGAGGATGGGCCAGCACCCCCAGGTGATGCAACTCCGTGGGTTTCTCCTGGG i papAnu2.chr10 C 0 I 1097 s chlSab2.chr19 18466250 457 + 33263144 tttttttttttttttttctgagagagagtctcactcactttgtcgcccaggctggagtgcagtggcatgatcttggctcagtgaaacctctgcctcccaggttcaagtgattctcctgcctcagcttcctgattagctgggactacaggcttgcaccaccatgcccagctaatttttgtatttttggtagaaacgggatttcaccatgttagccagactggtctcgaactcctgatgtcaagtgatgtgcctgtttccgtctccccaagtgctgagattacaggcgtgagccaccgcgcccagccTCTTCAAGGAGACTTTGAAGCCTCTGGAGAGGCACCTACAGGTCCCAGTTTGGACATGAGCATCTCCAGCCCAGAGAGGGTCTCAGTAAAGAAACCCCACTGAGGATGGGCCAGCACCCCCAGGTGATGCAACTCCGTGGGTTTCTCCTGGG i chlSab2.chr19 I 73 I 1096 e calJac3.chr1 198200869 0 + 210400635 C e ponAbe2.chr22 30810405 1004 + 46535552 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=2865.000000 s hg38.chr22_KI270876v1_alt 21311 2 + 263666 CA s panTro4.chr22 34402874 2 + 49737984 CA i panTro4.chr22 C 0 C 0 s rheMac3.chr10 80516028 2 + 95678458 CA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80938397 2 - 96509753 CA i macFas5.chr10 C 0 I 1130 s papAnu2.chr10 76200927 2 + 90941950 ca i papAnu2.chr10 I 1097 C 0 s chlSab2.chr19 18467803 2 + 33263144 CA i chlSab2.chr19 I 1096 C 0 e calJac3.chr1 198200869 0 + 210400635 C e ponAbe2.chr22 30810405 1004 + 46535552 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=2865.000000 s hg38.chr22_KI270876v1_alt 21313 2 + 263666 TC s panTro4.chr22 34402876 2 + 49737984 TC i panTro4.chr22 C 0 C 0 s rheMac3.chr10 80516030 2 + 95678458 TC i rheMac3.chr10 C 0 I 1133 s macFas5.chr10 80939529 2 - 96509753 TC i macFas5.chr10 I 1130 C 0 s papAnu2.chr10 76200929 2 + 90941950 tC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18467805 2 + 33263144 TC i chlSab2.chr19 C 0 C 0 e calJac3.chr1 198200869 0 + 210400635 C e ponAbe2.chr22 30810405 1004 + 46535552 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=5730.000000 s hg38.chr22_KI270876v1_alt 21315 6 + 263666 CCCTTT s panTro4.chr22 34402878 6 + 49737984 CCCTTT i panTro4.chr22 C 0 C 0 s macFas5.chr10 80939531 6 - 96509753 CCCTTT i macFas5.chr10 C 0 I 8 s papAnu2.chr10 76200931 6 + 90941950 CCCTTT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18467807 6 + 33263144 CCCTTT i chlSab2.chr19 C 0 C 0 e calJac3.chr1 198200869 0 + 210400635 C e ponAbe2.chr22 30810405 1004 + 46535552 I e rheMac3.chr10 80516032 1133 + 95678458 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=444666.000000 s hg38.chr22_KI270876v1_alt 21321 353 + 263666 TCCCCTTTCAGACTCCTCCAGGTTGTTTGGCCTGGGAGCTGACGATGTGAGTGCATTTTTCATTGCAATGAGATCTTAGGGCTCTGCAAGACTTTGACAGAAGAGTCAGGCCTGTGAGTGCTGTCAGACCCTGGCCTGGAAGGTCTGGGGTCTCCCTGGTGTGCAGAGGGCAGGTCTTCACCACATGACGGCGCTTCACAGCCTGGGAAGGGCGTGTCTATCGTTGCGTTTTTAATTTGCATTTGCTTACTTATAAATTATATACTATCACACTCGTCTTTAAGC------AAAGAAAAAAGAAAAAG-----AAATACAAATTAcagtcacacactgcataatgatgttttggtcaaagatgg s panTro4.chr22 34402884 358 + 49737984 TCCCCTTTCAGACTCCTCCAGGTTGTTTGGCCTGGGAGCTGACGATGTGAGTACATTTTTCATTGCGATGAGATCTTAGGGCTCTGCAAGACTTTGACGGAAGAGTCAGGCCTGTGAGTGCTGTCAGACCCTGGCCTGGAAGGTCTGGGGTCTCCCTGGTGTGCAGAGGGCAGGTCTTCAGCACATGATGGCGCTTCACAGCCTGGGAAGGGCGTGTCTATCGTTGCGTTTTTAATTTGCATTTGCCTAATTATAAATTATATACTATCACACTCGTCTTTAAGC------AAAGAAAAAAGAAAAAGAAATTAAATACAAATTAcagtcacacactgcataatgatgttttggtcaaagatgg i panTro4.chr22 C 0 C 0 s rheMac3.chr10 80517165 361 + 95678458 TCCCCTTTCAGACTCCTCCGGGTTGTCTGGCCTGGGAGCTGATGATGTAAG-GCATTTTTCATTGCAATGAGATCTTAGGGCTCTGTAGGACTTTGAC-GAAGAGTCAGGCCTGTGAGTGCTGTCAGACACTGGCCTGGAAGGTCTGGGGTCTCCCTGGTGTGCAGAGGGCAGGTCTTCACCAAGTGATGACGCTTCACAGCCTGGGAAGGGCGTGTCTATCATTGCGCTTTTAATTTGCACTTGCCTAATTGTAAATTACATACTATCACACTAGTCTTTAAGC-aaaaaaaaaaaaaaaaagaaaaaaaagaaaTACAAATCCCGGGCTCAcactgcataacggcgttttggtcaaagatga i rheMac3.chr10 I 1133 I 20 s macFas5.chr10 80939545 362 - 96509753 TCCCCTTTCAGACTCCTCCGGGTTGTCTGGCCTGGGAGCTGATGATGTAAG-GCATTTTTCATTGCAGTGAGATCTTAGGGCTCTGTAGGACTTTGAC-GAAGAGTCAGGCCTGTGAGTGCTGTCAGACACTGGCCTGGAAGGTCTGGGGTCTCCCTGGTGTGCAGAGGGCAGGTCTTCACCAAGTGATGACGCTTCACAGCCTGGGAAGGGCGTGTCTATCATTGCGCTTTTAATTTGCACTTGCCTAATTGTAAATTACATACTATCACACTAGTCTTTAAGCaaaaaaaaaaaaaaaaaagaaaaaaaagaaatacaaaTTATagtcacacactgcataacggcgttttggtcaaagatga i macFas5.chr10 I 8 I 20 s papAnu2.chr10 76200937 352 + 90941950 TCCCCTTTCAGACTCCTCCGGGTTGTCTGGCCTGGGAGCTGATGATGTAAGTGCATTTTTCATTGCAATGAGATCTTAGGGCTCTGTAGGACTTTGAC-AAAGAGTCAGGCCTGTGAGTGCTGTCAGACACTGGCCTGGAAGGTCTGGGGTCTCCCTGGTGTGCAGAGGGCAGGTCTTCACCATGTGATGACGCTTCACAGCCTGGGAAGGGCGTGTCTATCATTGCGCTTTTAATTTGCACTTGCCTAATTGTAAATTACATACTATCACACTGGtctttaagc-----------aaaaaaaaaaaaaaaagaaatacaaattacagtCACACACTGCATAACGACGTTTTGGTCAAAGATGA i papAnu2.chr10 C 0 I 20 s chlSab2.chr19 18467813 361 + 33263144 TCCCCTTTCAGACTCCTCTGGGTTGTTTGGCCTGGGAGCTGATGATGTAAGTGCATTTTTCATTGCAATGAGATCTTAGGGCTCTGTAGGACTTTGAC-GAAGAGTCAGGCCTGTGAGTGCTGTCAGACACTGGCCTGGAAGGTCTGGGGTCTCCCTGGTGTGCAGAGGGCAGGTCTTCACCATGTGATGACGCTTCACAGCCTGGGAAGGGCGTGTCTATCATTGCGCTTTTAATTTGCATTTGCCTAATTGTAAATTACATACTATCACACTGGTCTTTAAGC--aaaaaaaaaaaaaaaaaaaagaaattaaatacaaaTTGTagtcacacactgcataacgatgttttggtcaaagatga i chlSab2.chr19 C 0 C 0 e calJac3.chr1 198200869 0 + 210400635 C e ponAbe2.chr22 30810405 1004 + 46535552 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=375.000000 s hg38.chr22_KI270876v1_alt 21674 4 + 263666 gtaa s panTro4.chr22 34403242 4 + 49737984 gtaa i panTro4.chr22 C 0 C 0 s chlSab2.chr19 18468174 1 + 33263144 ---a i chlSab2.chr19 C 0 I 19 e calJac3.chr1 198200869 0 + 210400635 C e ponAbe2.chr22 30810405 1004 + 46535552 I e rheMac3.chr10 80517526 20 + 95678458 I e papAnu2.chr10 76201289 20 + 90941950 I e macFas5.chr10 80939907 20 - 96509753 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=14252.000000 s hg38.chr22_KI270876v1_alt 21678 27 + 263666 cccataaaattataacggg-------tttttttt s panTro4.chr22 34403246 31 + 49737984 cccataaaattataagggg---tttttttttttt i panTro4.chr22 C 0 C 0 s rheMac3.chr10 80517546 19 + 95678458 cccataaaattataatgca--------------- i rheMac3.chr10 I 20 C 0 s macFas5.chr10 80939927 19 - 96509753 cccataaaattataatgca--------------- i macFas5.chr10 I 20 C 0 s papAnu2.chr10 76201309 19 + 90941950 cccataaaattataatgca--------------- i papAnu2.chr10 I 20 C 0 s chlSab2.chr19 18468194 22 + 33263144 cccataaaattataatggattt------------ i chlSab2.chr19 I 19 C 0 e calJac3.chr1 198200869 0 + 210400635 C e ponAbe2.chr22 30810405 1004 + 46535552 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=1200382.000000 s hg38.chr22_KI270876v1_alt 21705 689 + 263666 gttttttttttttttgagatggagtctcactctgtcacccaagctggagtgcagtggtgcgatctcagctcactgcaacctctgcctcccaggttcaagtgattct-gggcctcagtctcccaagtagctgggattacagacatgcgctaccacgcctggctaatttttgtattttagtacagatggggtttcaccatgttggccaggtttgtctcaaactcctgacctcaagtgatccgctggccttgacctcccaaagtcctgggattacaggtgtaagccacggtgcccagcccattttaatcttttatatcatatttttactgtcccttttctatatttagagatgtttagatacacaaatacttaccattgtgttacagttgcctgcaatattcagtacaagcacatgctgtacagacctgtagcctaggaccaatgggccataccacgtagcataggcatggagtaggccagaccacctaggtttgtgtaaatatactctatgatgtttgtgaaatgatgaaattgcctaaggatgcatttcttagaatgtgtccccttcgttaggtgaggaatgactgTactaatgaggttgagcatctttttaaatattaactggccattggatatcttcgtttgtgaagtacctatttcaagtttctcatccacttttctattggactata s panTro4.chr22 34403277 687 + 49737984 tttttttttttttttgtgatggagtctcactctgtcacccaagctggagtgcagtggtgcgatctcagctcactgcaacctctgcctcccaggttcaagtgattct-gggcctcagtctcccaagtagctgggattacagacacgcgctgccacgcctggctaatttttgtattttagtacagatggggtttcaccatgttggccaggtttgtctcaaactcct-acctcaagtgatccgctggccttgacctcccaaagtcctgggattacaggtgtaagccaccgtgcccagcccattttaatcttttatatcatatttttactgtcccttttctatatttagagatgtttagatacacaaatacttaccattgtgttacagttacctgcaatattcagtacaagcacatgctgtacagacctgtagcctagggccaatgggccataccacgtagcataggcatggagtaggccagaccacctaggtttgtgtaaatatactctatgatgtttgtgcaatggtgaaattgcctaaggatgcatttcttagaatgtgtccccctcgttaggtgatgaatgactgTactaatgaggttgagcatctcttcaaatattaactggccattggatatcttcttttgtgaagtaccta-ttcaagtttctcatccacttttctattggactata i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30811409 684 + 46535552 gttttttttttttttgagat-gagtctcactctgtcacccaagctggagtgcagt-gtgcgatctcagctcactgcaa-ctctgcctcccgggttcaagtgattct-gtg-ctcagtctcccaagtagctgggattacagacatgcactaccaagcctggctaatttttgtattttagtacagatggggtttcaccatgttggccaggtttgtctcaaactcctgaccttaagtgatccgccggccttgacctcctaaagtcctgggattacaggtgtgagccaccgtgcccagcccattttaatcttttatatcatatttttactgtcccttttctatatttagagatgtttagatacacaaatacttaccattgtgttgcagttgcctgcaatattcggtacaagcacatgctgtacagacctgtagcctaggaccaatatgcgataccacgtagcacaggcttggagtaggccagaccacctaggtttgtgtaaatatactctatgatgtttgtgcaatgatgaaattgcctaaggatgcgtttctcagaatgtgtccccttcgttaggtgatgaatgactgTactaatgaggttgagcatcttttcaaatattaactggccattggatatcttcttttgtgaagtaccta-ttcaagtttctcatccacttttctattggactata i ponAbe2.chr22 I 1004 C 0 s rheMac3.chr10 80517565 685 + 95678458 gttttttttctttctgagattgagtctcactctgtcacccgggctggagtgcagtggtaagatctcagctcactgcaaactctgcctcctgggttcaggtgattctcctgcctaagcctcccaagtagctgggattaaagaaatgcgctaccacacccagctaattttt-tattttagtacagacagggtttcagcatgttggccaggtttgtctcaaactcttgacctcaggtgatccgccagcctcgacctcccaaagtcctggggttacaggtgtaagccaccttgcccagccgattttaatcttttatatcatatttttactgtcccttttctctatttagagatgtttagagacacaaatacttaccattgtgttacagttgcctgcaatattcggtacaagcgcgtgctgtacaggcctgtagcctgggagcaatggtccataccacgtagcctaggcatggaataggccagaccacctaggtttgtgtaaatacactctgtgatgtttgtgcaatgatgaaattgcctaaggatgcgtttctcagaatgtgtccccttcgttaggtgatgaatgactgCactaatgaggttgagcatcttttcaaatatttactggccattggata---tcttttgtcaagtaccta-ttcaagtttctcaatcacttttctattgaactatt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80939946 685 - 96509753 gttttttttctttctgagattgagtctcactctgtcacccgagctggagtgcagtggtacgatctcagctcactgcaacctctgcctcctgggttcaagtgattctcctgcctcagcctcccaagtagctgggattacagacatgcgctaccacacccagctaattttt-tattttagtacagacagggtttcatcatgttggccaggtttgtctcaaactcctgacctcaggtgatccgccagcctcgacctcccaaagtcctggggttacaggtgtaagccaccttgcccagcccattttaatcttttatatcatatttttactgtcccttttctatatttagagatgtttagagacacaaatacttaccattgtgttacagttgcctgcaatattcggtacaagcgcgtgctgtacaggcctgtagcctgggagcaatggtccataccacgtagcctaggcatggaataggccagaccacctaggtttgtgtaaatacactctgtgatgtttgtgcaatgatgaaattgcctaaggatgcgtttctcagaatgtgtccccttcgttaggtgatgaatgactgCactaatgaggttgagcatcttttcaaatatttactggccattggata---tcttttgtcaagtaccta-ttcaagtttctcaatcacttttctattgaactatt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76201328 683 + 90941950 gttttttttctttctgagattgagtctca--ctgtcacctgagctggagtgcagtggtacgatctcagctcactgcaacctctgcctcctgggttcaagtgattctccttcctcagcctcccaagtagctgggattacagacatgcgctaccacacccggctaattttt-tattttagtacagacagggtttcatcatgttggccaggtttgtctcaaactcctgacctcaggtgatccgccagcctcgacctcccaaagtcctggggttacaggtgtaagccaccttgcccagcccattttaatcttttatatcatatttttactgtcccttttctatatttagagaTGTTTAGagacacaaatacttaccattgtgttacagttgcctgcaATATTCGGTACAAGCGCGTGCTGTACAGGcctgtagcctgggagcaatggGCCATACCACGTAGCCTAGGCATGGAATAGGCCagaccacctaggtttgtgtaaatacactctgtgatgtttgtgcaatgatgaaattgcctaaggatgcgtttctcagaatgtatccccttCGTTAGGTGATGAATGACTGCActaatgaggttgagcatcttttcaaatatttactggCCATTGGATA---TCTTTTGTCAAGTACCTA-TTCAAGTTTCTCAATCACTTTTCTATTGAACTATT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18468216 688 + 33263144 tttttttttctttctgagattgagtctcactctgtcacccgagctggagtgcagtggtgcaatctcagctcactgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcccaagtagctgggattacagacatgtgctaccatacccggctaattttt-tattttagtacagacagggtttcatcatgttggccaggtttgtctctaactcctgacctcaggtgatccgccagcctcgacctcccaaagtcctggggttacaggtgtaagccaccgtgcccagcccattttaatcttttatatcgtatttttactgtcccttttctatatttagagatgtttagagacacaaatacttaccattatgttatagttgcctgcaatattcggtacaagcgcatgctgtacagttctgtagcctgggagcaataggccataccacgtagcctaggcatggaataggccagaccacctaggtttgtgtaaatacactctgtgatgtttgtgcaatgatgaaattgcctaaggatgtgtttcttagaatgtgtccccttcgttaggtgatgaacgactgCactagtgaggttgagcatcttttcaaatatttactggccattggatatcttcttttgtgaagtgtcta-ttcaagtttctcatacacttttctattgaactatt i chlSab2.chr19 C 0 C 0 e calJac3.chr1 198200869 0 + 210400635 C e nomLeu3.chr7b 100374172 1 - 115148730 I a score=540061.000000 s hg38.chr22_KI270876v1_alt 22394 277 + 263666 catcttcttcttactaattataggaattcttcacatttgctggaaatgGACCTTTTGTGGATCAAGGGACTATTCAGTAACGAGAGTAAAGGAGGAGAGTGGAGAGTGGTGGGGGGCCTCTCATCAGGCCATAGAAACCACAGAAAAAGTCCTCGGCCTTAGCCTGAGAGCCATGGTGCCCTGGAGAAGGGTTTTTCTTACCATCTGACTATTCTGTTCTCTTCAAgactgacagcactggtgtcatttgggagttcggttagaaatacagaattcC s panTro4.chr22 34403964 275 + 49737984 catcttcttcttactaattataggaattcttcatgtttgctggaaatgGACCTTTTGTTGATCAAGGGACTGTTCAGTAACGAGAGTAAAGGAGGAGAGTGGAGAGTGGTGGGGGGCCTCTCATCAGGCCATAGAAACCACAGAAAAAGCCCTTGGCCTTAGCCTGAGAGCCATGGTGCCCTGGAGAAGGG--TTTCTTACCACCTGGCTATTCTGTTCTCTTCAAgactgacagcactggtgtcatttgggagttcggttagaaatacagaattcc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30812093 275 + 46535552 catcttcttcttactaattataggaattcttcatgtttgctggaaatgGACCTTTTGTTGATCAAGGGACTGTTCAGTAATGAGAGTAAAGGAGGAGAGTGGAGAGTGGTGGGGGGCCTCTCATCAGGGCATAGAAACCACAGAAAAAGCCCTCAACCTTAGCCTGAGAGCCATGGTGCCCTGGAGAAGGG--TTTCTTACCACCTGACTATTCTGTTCTCTTCAAGACTGACAGCACTGGTGTCATTTGGGAGTTCGGTTAGAAATACAGAATTCC i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80518250 275 + 95678458 tatcttcttcttaataattataggagttcttcatgtttgctggaaatgggCCTTTTGTTGATCAAGGGACTGTTCAGTAACGAGAGTGAAGGAGGAGGGTGGAGAGTGGTGGGGGGCCTCTCATCAAGCCATGGAAACCACAGAAAAAGCCCTTGGCCTTAGCCTGAGAGCCACGGTGCCCTGGAGGAGGG--TTTCTTACCACCTGACTATTCTGTTCCCTTCAAgactgacagcatccgtgtcatttgggagttcggttaaaaatacagaatTCC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80940631 275 - 96509753 tatcttcttcttaataattataggagttcttcatgtttgctggaaatgggCCTTTTGTTGATCAAGGGACTGTTCAGTAACgagagtgaaggaggagggtggagagtggtggggggCCTCTCATCAAGCCATGGAAACCACAGAAAAAGCCCTTGGCCTTAGCCTGAGAGCCACGGTGCCCTGGAGGAGGG--TTTCTTACCACCTGACTATTCTGTTCTCTTCAAgactgacagcatccgtgtcatttgggagttcggttaaaaatacagaattcC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76202011 275 + 90941950 TATCTTCTTCTTAATAATTATAGGAGTGCTTCATGTTTGCTGGAAATGGGCCTTTTGTTGATCAAGGGACTGTTCAGTAACGAGAGTGAAggaggagggtggagagtggTGCGGGGCCTCTCATCAAGCCATGGAAACCACAGAAAAAGCCCTTGGCCTTAGCCTGAGAGCCATGGTGCCCTGGAGGAGGA--TTTCTTACCACCTGACTATTCTGTTCTCTTCAAGACTGACAGCATCCGTGTCATTTGGGAGTTcggttaaaaatacagaattcc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18468904 272 + 33263144 ta---tcttcttactaatgataggagttcttcgtgtttgctggaaatgggCCTTTTGTTGATCAAGGGACTGTTCAGTAACGAGAGTGAAGGAGGAGGGTGGAGAGTGGTGGGGGGCCTGTCATCAAGCCATGGAAACCACAGAAAAAGCCCTTGGCCTTAGCCTGAGAGCCATGGTGCCCTGGAGAAGGG--TTTCTTACCACCTGACTATTCTGTTCTCTTCAAgactgacagcatcggtgtcatttgggagttcggttaaaaatacagaattcC i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40808958 237 - 69331447 CACTTTCTTTTTAAT--TTATCGGCATTCTCTGTATTTTCTGCATATGGGCCTTTTGTTGATCGGGAGACTGTGCAGTGATAAACACAGAGGTGGAGGCAGGA-AATAGGGTGAGGCCG---ACTGGGCC--TGGAGCCACAGGAAAGAGCTGGAACTTGGACTTGAGAACCACAGGACc----agagtgt--ggtcttgc--------------------------gccggcagcctcagcgctccctgggactttggttagaaaggcagagctcc i canFam3.chr10 N 0 I 77 e calJac3.chr1 198200869 0 + 210400635 C e nomLeu3.chr7b 100374172 1 - 115148730 I a score=115155.000000 s hg38.chr22_KI270876v1_alt 22671 66 + 263666 ggctggacacggtggctcatgcctataattccaacactttgggaggctgaggcgggcggatcattt s panTro4.chr22 34404239 66 + 49737984 ggctggacacggtggctcatgcctataattccaacactttgggaggctgaggcgggcggatcattt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30812368 66 + 46535552 ggctggatgcggtggctcatgcctgtaattccaacattttggaaggctgaggcgggcggatcattt i ponAbe2.chr22 C 0 I 435 s rheMac3.chr10 80518525 66 + 95678458 ggctggacgcggtggctcatgcctgtaatcccaacagtttgggaggccaaggcaggtggatcattt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80940906 66 - 96509753 ggctggacgcggtggctcatgcctgtaatcccaacagtttgggaggccaaggcaggtggatcattt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76202286 66 + 90941950 agctggacgcggtggctcatgcctgtaatcccaacagtttgggaggccaaggcaggtggatcattt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18469176 66 + 33263144 ggctgggtgcggtggctcatggctgtaatcccaacactttgggaggccaaggcaggcggatcattt i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40809195 77 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C e nomLeu3.chr7b 100374172 1 - 115148730 I a score=510334.000000 s hg38.chr22_KI270876v1_alt 22737 300 + 263666 gaggtcaggagtttgaggccagcctgacaaacatgg---tgaaatcctgtctctactaaaaatacaaaaaaaagtagtcgggcatggtggcacgcacctgtagtcctagctacttgggaggctgaggcaggagaattgcttgaacccagaagacagaggttgcagtgagccgagatcacaccactgcactccagcctgggagacagagcaagactccatctcaaaaagaaaaaaaaaagagagaaatcgagaccatcctggctaacatggtgaatccctgtctctactgaaaatacaaaaatt s panTro4.chr22 34404305 299 + 49737984 gaggtcaggagtttgaggccagcctgacaaacatgg---tgaaatcctgtctctactaaaaatacaaaaaaaagtagtcgggcatggtggcacgcacctgtagtcctagctacttgggaggctgaggcaggagaattgcttgaacccagaagacagaggttgccgtgagccgagatcacaccactgcactccagcctgggagacagagcaagactccatctcaaaaag-aaaaaaaaagagagaaatcgagaccatcctggccaacatggtgaaaccttgtctctactgaaaatacaaaaatt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30812869 299 + 46535552 gaggtcaggagtttgaggccagcctgacaaacatgg---tgaaatcctgtctctactaaaaatacaaaaaaaattagttgggcatggtggcacacacccgtagtcctagctacttggaaggctgaggcaggagaattgcttgaacccagaagacagaggtttcagtgagccgagatcacaccaccgcactccagcctgggagacagagcaagacttcatctcaaaaag-aaaaaaaaagagagaaatcaagaccatcctggccaacatggtgaaaccctgtctctactgaaaatacaaaaatt i ponAbe2.chr22 I 435 C 0 s rheMac3.chr10 80518591 292 + 95678458 gaggttaagagttcgaggccaacctgagcaacatag---tgaaatcccatctctactgaaaatac-aaaaaaattagttgggcatggtggcacgcagttgtagtcctagctacttgggaggctgaggcaggagaattgcttgaacccaggagacagaggtagcagtgagccaagatcgcaccactgcactccagcctgggagac--aacaagactccatctcaaaaag-----aaaaaaaaagaaatcgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaatt i rheMac3.chr10 C 0 M 231 s macFas5.chr10 80940972 296 - 96509753 gaggttaagagttcgaggccaacctgagcaacatag---tgaaatcccatctctactgaaaatac-aaaaaaattagttgggcatggtggcacgcagttgtagtcctagctacttgggaggctgaggcaggagaattgcttgaacccaggagacagaggtagcagtgagccaagatcgcaccactgcactccagcctgggagacagaacaagactccatctcaaaaag---aaaaaaaaaaagaaatcgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaatt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76202352 299 + 90941950 gaggttaagagttcgaggccaacctgagcaacatagtgatgaaatcccatctctactgaaaatac-aaaaaaattagttgggcatgatggcacgcacttgtagtcctagctacttgggaggctgaggcatgagaattgcttgaacccaggagacagaggtagcagtgagccaagatcgcaccactgcactccagcctgggagacagaacaagactccatctcaaaaag---aaaaaaaaaaagaaatcgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaatt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18469242 292 + 33263144 gaggtcaagagttcgaggccaacctgagcaacatag---tgaaatcccgtctctactgaaaatac-aaaaaaattagttgggcgtggtggcacgcacctgtagtcctagctacccgggaagctgaggcaggagaattgcttgaacccaggagacagaggttgcagtgagccaagatcacaccactgcacttcagcctgggagacagaacaagactccatctcaaaaag-------aaaaaaaaaaatcgagactagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaatt i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40809195 77 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C e nomLeu3.chr7b 100374172 1 - 115148730 I a score=186757.000000 s hg38.chr22_KI270876v1_alt 23037 148 + 263666 agctgggcatggtggcatgagcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaacccgagaggtggaggttgcagtgagccgagatcccaccactgcactgcagcctgggcaacaagagcaaaactctgtctc s panTro4.chr22 34404604 148 + 49737984 agctgggcatggtggcatgagcctgtaatcccagcgacttgggaggctgaggcaggagaatcgcttgaacccgagaggtggaggttgcagtgagccgagatcccaccactgcactccagcctgggcaacaagagcaaaactctgtctc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30813168 148 + 46535552 agctgggcatggtggcaccagcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaacctgagaggtggaggttgcagtgagccgagatcccaccactgcacaccagcctgggcaacaagagcaaaactccgtctc i ponAbe2.chr22 C 0 C 0 s macFas5.chr10 80941268 148 - 96509753 agctgggagtggtggcatgcacctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgaacctgagacgtggaggttgcagtgagccgagattgcaacactgcactccagcctgggcagcaagagtgaaactccgtctc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76202651 148 + 90941950 agctgggagtggtggcatgcacctgtagtcccagctacttgggaggctgaggcaggagaattgcttgaacctgagacgtggaggttgcagtgagccgagattgcaacattgcactccagcctgggcagcaagagtgaaactctgtctc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18469534 148 + 33263144 agctgggagtggtggcatgcacctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgaacccgagacgtggaggttgcagtgagccgagattgcaacactgcactccagcttgggcagcaagagtgaaactccgtctc i chlSab2.chr19 C 0 I 3 e canFam3.chr10 40809195 77 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C e rheMac3.chr10 80518883 231 + 95678458 M e nomLeu3.chr7b 100374172 1 - 115148730 I a score=385892.000000 s hg38.chr22_KI270876v1_alt 23185 230 + 263666 aaaaaaaagaaaaaaaaaaaagaaaaaagaaatacggaattccaggccctgtcctgtccaagacctcctgaaacacaatcagcaatttgataaggtctccagggaatgatttacacggtaaaatctgggaagtgctgGTTTGTCAAGAACCTTCAGGATCACATCTGTGCTCTTCACAAACATCGCTTGGATTAAAAAGGGGGGAAGGGGCAGAGCCGTCCATGGTTACA s panTro4.chr22 34404752 230 + 49737984 aaaaaaaaagaaaaaaaaaaagaaaaaagaaatatggaattccaggccctgtcctgtccaagacctcctgaaacacaatcagcaatttgataaggtctccagggaatgatttacacggtaaaatctgggaagtgctgGTTTGTCAAGAACCTTCAGGATCACATCTGTGCTCTTCACAAACATCGCTTGGATTAAAAAGGGGGGAAGGGGCAGAGCCGTCCATGGTTACA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30813316 224 + 46535552 aaaaaaaagaaaaaaa------aaaaaagaaaTATGGAATTCCAGGCCCTGTCCTGTCCAAGACCTCCTGAAACACGATCAGCAATTTGATAAGGTCTCCAGGGAATGATTTACACAGTAAAATCTGGGAAGTGCTGGTTTGTCAAGAACCTTCAGGGTCATATCTGTGCTCTTCACAAACATCGCTTGGATTAAAAAGGGGGGAAGGGGCAGAACCGTCCATGGTTACG i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80519115 228 + 95678458 aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaGACAGAATTCCAGGCCCTGTCCTGTCCAAGACCTCCTGAAACACAATCAGCAATTTGATAAGGTCTCCAGGGAATCATTTACACGGT--GGTCTGGGCAGTGCTGGTTTGTCAAGAACCTTCAGGGTCACATCTGTGCTCTTCACAAACATTGCTTGGATTAAAAAGGGCAGAAGGGGCAGAGCTGTCCATGGTCATG i rheMac3.chr10 M 231 C 0 s macFas5.chr10 80941416 211 - 96509753 -----------------aaaaaaaaaaaaaaaGACAGAATTCCAGGCCCTGTCCTGTCCAAGACCTCCTGAAACACAATCAGCAATTTGATAAGGTCTCCAGGGAATCATTTACACGGT--GGTCTGGGCAGTGCTGGTTTGTCAAGAACCTTCAGGGTCACATCTGTGCTCTTCACAAACATTGCTTGGATTAAAAAGGGCAGAAGGGGCAGAGCTGTCCATGGTCATG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76202799 216 + 90941950 ------------aaaaaaaaaaaaaaaaaaaagacagaattccAGGCCCTGTCCTGTCCAAGACCTCCTGAAACACAATCAGCAATTTGATAAGGTCTCCAGGGAATCATTTACACGGT--GGTCTGGGCAGTGCTGGTTTGTCAAGAACCTTCAGGGTCACATCTGTGCTCTTCACAAACATTGCTTGGATTAAAAAGGGCAGAAGGGGCAGAGCTGTCCATGGTCATG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18469685 228 + 33263144 aaaaaaaaaaaaaaaaaaaagaaagaaAGAAATACAGAATTCCAGCCCCTGTCCTGTCCAAGACCTCCTGAAACACAATCAGCAATTTGATAAGGTCTCTAGGGAATCATTTACACGGT--AGTCTGGGCAGTGCTGGTTTGTCAAGAACCTTCAGGGTCACATCTGTGCTCTTCACAAACATTGCTTGGATTAAAAAGGGCAGAAGGGGCAGAGCTGTCCATGGTCATG i chlSab2.chr19 I 3 C 0 e canFam3.chr10 40809195 77 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C e nomLeu3.chr7b 100374172 1 - 115148730 I a score=931878.000000 s hg38.chr22_KI270876v1_alt 23415 501 + 263666 GTTCTGTTCCAAGATAAATATACGCTTTCCTCTGCGCTGA--------------------------------------------------------TTTTTTTCTGATGAGAAGACCAGAATATTTATGCAACTCCC-----------TTGAGTAGTTATATATTTATAGGG---------------------------GCAGGCAGTGGTCAACAGTGGCCC-GAACCATTGGACTCCTTGCTCAAAACTGCCTCAGCTCATCTGCCTGAAATTCC--AGTTACTGTCA----------TGTTGTGGGGACCCAT-ATAGGAACAAAACGTGGACTACTC-GAGAGGTAGCTACCCTGCGCCCACAGACTGTGACAACGGAgggtga--cccaggtaagtacttcaatcgaatgaac--tttaatttccttggctacacaatgcgagtaacacaaatgcgcttcccttac-aatgctattttgagtggtacatgagaaaatgGATGTCAAGTC----TTTTTTTCATTAAATGATATGTCAGTCAAAAGATGAGTGTGGATGGTGGTTACCATGGGTGGTGGACTTGAAATGACCTGTGTTCACTTCC-----------------TTTTACTTAT s panTro4.chr22 34404982 501 + 49737984 GTTCTGTTCCAAGATAAATATACGCTTTCCTCTGTGCTGA--------------------------------------------------------TTTTTTTCTGATGAGAAGACCAGAATATTTATGCAACTCCC-----------TTGAGTAGTTATATATTTATAGGG---------------------------GCAGGCAGTGGTCAACAGTGGCCC-GAACCACTGGACTCCTTGCTCAAAACTGCCTCAGCTCATCTGCCTGAAATTCC--AGTTACTGTCA----------TGTTGTGGGGACCCAT-ATAGGAACAAAACGTGGACCACTC-GAGAGGTAGCTACCCTGCGCCCACAGACTGTGACAACAGAGGgtga--cccaggtaagtacttcaatcgaatgaac--tttaatttccttggctacacaatgcgagtaacacaaatgcgcttcccttac-aatgctattttgagtggtacatgagaaaatggatgtcaagtc----tttttTTCATTAAATGGTATGTCAGTCAAAAGATGAGTGTGGATGGTGGTTACCATGGGTGGTGGACTTGAAATCACCTGTGTTCACTTCC-----------------TTTTACTTAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30813540 497 + 46535552 GTTCTGTTCCAAGATAAATATACGCTTTCCTCTGTGCTGAC-------------------------------------------------------TTTTTTTCTGATGAGAAGACCAGAATATTTATGCAACTCCC-----------TTGAGTAGTTATATATTTATAGGG---------------------------GCAGGCAGTGGTCAACAGTGGCCC-GAACCCTTGGACTCCTTGCTCAAAGCTGCCTCAGCTCATCTGCCTGAAATTCC--AGTTACTGTCA----------TGTTGTGGGGACCCAT-ATAGGAACGAAACGTGGATCACTT-GAGAGGTAGCTACCCTGCGCCCACAGACTGTGACAACAGAGGgtga--cccaggtaagtacttcaaccgaatgaac--tttaatttccttggctacacaatgcgagtaacacaaatgcgcttaccttac-aatgctattttgagtggtacatgagaaaatggatgtcaaGTC----TGTTTTTCATTGAATGACATGTCAGTCAAAAGATGAGTGTGGATGGTGGTTACCATGGGTGGTGGACTTG-----ACCTGTGTTCACTTCC-----------------TTTTGCTTAT i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80519343 495 + 95678458 GTTCTGTTCCAAGGTAAATATACGCTTTCCTCTGTGCTGA---------------------------------------------------------TTTTTTCTGATGAGAAGACCAGAATATTTATGCAACTCCC-----------TTGAGTGGTTATATATTTATAGGG---------------------------GCAGGCAGTGGTCAACAGTGGCCC-GAACCCTTGGACTCCTTGCTCAAAGCTGCCTCAGCTCATCTGCCTGAAATTCC--AGTTACTGTCA-------------CATGCAGACCCAT-ACAGGAACAAAATGTGGATCTCTC---GAGGTAGCTACCCTGCGCCTACAGACTGTGACAACAGGGGgtga--cccaggtaagtacttcaactgaatgaac--tttaatttccttggctacacaatgcgagta--acaaatgtgcttacctt-c-aatgttattttgagtggtacatgagaaaatggatgtcaagtc-tttttttttttgttaaatgatatgtcagtcaaaagattaGTGTGGATGGTGGTTACCACGGGTGGTGGACTTGAAATGACCTGTGTTCACTTCC-----------------TTTTGCTTAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80941627 495 - 96509753 GTTCTGTTCCAAGGTAAATATACGCTTTCCTCTGTGCTGA---------------------------------------------------------TTTTTTCTGATGAGAAGACCAGAATATTTATGCAACTCCC-----------TTGAGTGGTTATATATTTATAGGG---------------------------GCAGGCAGTGGTCAACAGTGGCCC-GAACCCTTGGACTCCTCGCTCAAAGCTGCCTCAGCTCATCTGCCTGAAATTCC--AGTTACTGTCA-------------CGTGCAGACCCAT-ACAGGAACAAAATGTGGATCTCTC---GAGGTAGCTACCCTGCGCCTACAGACTGTGACAACAGGGGgtga--cccaggtaagtacttcaaccgaatgaac--tttaatttccttggctacacaatgcgaata--acaaatgtgcttacctt-c-aatgttattttgagtggtacatgagaaaatggatgtcaagtc-tctttttttttgttaaatgatatgtcagtcaaaagattaGTGTGGATGGTGGTTACCACGGGTGGTGGACTTGAAATGACCTGTGTTCACTTCC-----------------TTTTGCTTAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76203015 496 + 90941950 GTTCTGTTCCAAGGTAAATATACGCTTTCCTCTGTGCTGa---------------------------------------------------------ttttttctgatgagaagaCCAGAATATTTATGCAACTCCC-----------TTGAGTGGTTATATATTTATAGGG---------------------------GCAGGCAGTGGTCAACAGTGGCCC-GAACCCTTGGACTCCTTGCTCAAAGCTGCCTCAGCTCATCTGCCTGAAATTCC--AGTTACTGTCA-------------CGTGCAGACCCAT-ACAGGAACAAAATGTGGATCTCTC---GAGGTAGCTACCCTGTGCCCACAGACTGTGACAACAGGGGGTGA--CCCAGGTAAGTACTTCAACCGAATGAAC--TTTAATTTCCTTGGCTACACAATGCGAGTA--ACAAATGTGCTTACCTT-C-AATGTTATTTTGAGTGGTACATGAGAAAATGgatgtcaaatcttttttttttttgttaaatgataTGTCAGTCAAAAGATTAGTGTGGATGGTGGTTACCACGGGTGGTGGACTTGAAATGACCTGTGTTCACTTCC-----------------TTTTGCTTAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18469913 494 + 33263144 GTTCTGTTCCAAGGTAAATATACGCTTTCCTCTGTGCTGA---------------------------------------------------------TTTTTTCTGATGAGAAGACCAGAATATTTATGCAACTCCC-----------TTGAGTGGTTATATATTTATAGGG---------------------------GCAGGCAGTGGTCAACAGTGGCCC-GAACCCTTGGACTCCTTGCTCAAAGCTGCCTCAGCTCATCTGCCTGAAATTCC--AGTTACTGTCA----------TGTTGTGCGGACCCAT-ACAGGAACAAAATGTGCATCTCTC----AGGTAGCTACCCTGCGCCCACAGAC--TGACAACAGGTGgtga--cccaggtaagtacttcaaccgaatgaac--tttaatttccttgactacacaatgcgagta--acaaatgtgcttactttac-aatgttatttggagtggtacatgagaaaatggatgtcaagtc---ttttttttcattaaatgatatgtcagtcaaaagattaGTGTGGATGGTGGTTACCACGGGTGGTGGACTCGAAATGACCTGTGTTCACTTCC-----------------ATTTGCTTAT i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40809272 628 - 69331447 GTTCTGCTCCAGGGTAAATACACTCATTCCTTTGAGGTGTTCACATAACAGGGGTTtgtgtgtgtgtgtgtgtgtgttttcctgtgtgtgtgtgtgtgtTTTCCTGAGGAGAGAGCCAAAATAGTTATGCACCTCCCAGCCTGGTGTGATACATGGCTACGTAGTCACTGAGCTCTTTGTCAGCTACGCAGGTGGCACAGCAGACAGGAGTCAGACGTTCCCTGGGACCCTTGGAAACCCGGTTCAAAGGTGCCTCATCTCATCTGCCTACAATTGCAAAGTTAGAGAGAAGGTCCTAGAAGTTATGGGGACCCCTCATCGAGGCTCagagcagactaaccttggagatgatgaacctggactcttctgctctgcacacagcgagacaagcctgagtaagtacttcaccagactgaactatatacctccctgggctgtaaaatgtgagaaacaaaaacacacctgccttacaaatattgcttgaggccacatgggagaaaatgcatgggaaggc--------ctgtgtgaaACACTCCATTAGTCAAGATACTGGTTTGCATGGTGATTATCATGGGTGGCAGCATCAAGAGGGATTGTGTTCTCTCTCTTTTTATTCCCCAaagattttatttat i canFam3.chr10 I 77 I 188 e calJac3.chr1 198200869 0 + 210400635 C e nomLeu3.chr7b 100374172 1 - 115148730 I a score=434877.000000 s hg38.chr22_KI270876v1_alt 23916 237 + 263666 CGAAGTGTCAACATTtgttatcaagaacatgcaaaacgtatgcatatgcaggttttgaataaaaagctaatgcgatataatctTTGTC----------AGTATCTAGATATATTCTAAAAAGCAAAGCTAAGATAGTATTATGAATCAAAATGTCTTTTCTTCTGTGCTCTGAAGAACTAATAGCATGCCAAAAAAATCAT-------ACTAAGGTATAAAACACACAAAATTTTcacacacacacacacacac s panTro4.chr22 34405483 237 + 49737984 CAAAGTGTCAACGTTTGTTATCAAGAACATGCAAAACGTATGCGTATGCAGGTTTTGAATAAAAAGCTAAAGCGATATCATCTTTATC----------AGTATCTAGATATATTCTAAAAAGCAAAGCTAAGATAGTATTATGAATCAAAATCTCTTTTTTTCTGTGCTCTGAAGAACTAATAGCATGCCAAAAAAATCAT-------ACTAAGGTATAAAACGCACAAAATTTTcacacacacacacacacac i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30814037 247 + 46535552 CAAAGTGTCAACATTTGTTATCAAGAACATGCAAAACGTATGCGTATGCAGGTTTTGAATAAAAACCTAAAATGATATCATCTTTATCTAGATATATTAGTATCTAGATATATTCTAAAAAGCAAAGCTAAGATAGTATTATGAATCAAAATGTCTTTTCTTCTATGCTCTGAAGAACTAATAGCATGCCAAAAAAATCAT-------ACTAAGGTATAAAACACACAAAATTTTCACGCGCACACACACACAC i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80519838 224 + 95678458 CAAAGTGTTGACATTTGTTATCAAGAACATGCAAAAC--ATGTGTATGCAGGTTTCGAATAAAAAGCTAAAAAGATATCATCTTTATC----------AGTATC----TAGATTCTAAAAAACAAAACTAAGATAGTATTATGAATCAAAATGTCTTTTCTTCTATGCTCTGAAGAACTACTAGCATGTCAAAAAAATTAT-------ACTAAGGTATAAAACACACAAAATTTTCACACACACACA------- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80942122 224 - 96509753 CAAAGTGTTGACATTTGTTATCAAGAACATGCAAAAC--ATGTGTATGCAGGTTTCGAATAAAAAGCTAAAAAGATATCATCTTTATC----------AGTATC----TAGATTCTAAAAAACAAAACTAAGATAGTATTATGAATCAAAATGTCTTTTCTTCTATGCTCTGAAGAACTACTAGCATGTCAAAAAAATTAT-------ACTAAGGTATAAAACACATAAAATTTTCACACACACACA------- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76203511 226 + 90941950 CAAAGTGTTGACATTTGTTATCAAGAACATGCAAAAC--ATGTGTATGCAGGTTTCgaataaaaagctaaaaagataTCATCTTTATC----------AGTATCTAGATAGATTCTAACAAGCAAAACTAAGATAGTATTATGAatcaaaatgtcttttcttctatGCTCTGAAGAACTACTAGCATGTCaaaaaaaTTAT-------ACTAAGgtataaaacacacaaaatttt--cacacacaca------- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18470407 230 + 33263144 CAAAGTGTTGACATTTGTTATCAAGATCAGGCAAGACATATGTGTGTGCAGGTTTTGAATAAAAAGCTAAAAAGATATCATCTTTATC----------AGTATCTAGATAGATTCAAAAAAGCAAAGCTAAGATAGTATTATGAATCAAAATGTCTTTTCTTCTATGCTCTGAAGAACTAATAGCATGTCAAAAAAATTAT-------ACTAAGGTATAAAACACACAAAATTTTCACACACACACA------- i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40810088 232 - 69331447 TGAAGCGTCTGCATTTCTTA-------CAAGTAAAACGTGTATGTATGTAGGTTTTGAATAAAAGGCTAAAAAGATAGACAGTTTATC----------AGTTTCTGGGTAGACTCTAAGAAGTAAACCTAAGA---TATTATGAATCAAAATG--TTTCTCTCTGGGCTCCTAAGAAGGGATAACATGCCAAAACATATGTATATGTAACCAGAACATAGACATTGCAAAACTGTCCCACACAGACACACTCAC i canFam3.chr10 I 188 I 16 e calJac3.chr1 198200869 0 + 210400635 C e nomLeu3.chr7b 100374172 1 - 115148730 I a score=50906.000000 s hg38.chr22_KI270876v1_alt 24153 36 + 263666 acacacTTCTTCTGAGAGTTTCTATTTTCATGGCTA s panTro4.chr22 34405720 36 + 49737984 acacacTTCTTCTGAGAGTTTCTATTTTCATGGCTA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30814284 29 + 46535552 A-------CTTCTGAGAGTTTCTATTTTCATGGCTA i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80520062 28 + 95678458 --------CTTCTGAGAGTTTCTATTTTCACGGCTA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80942346 28 - 96509753 --------CTTCTGAGAGTTTCTGTTTTCACGGCTA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76203737 28 + 90941950 --------cttctgagAGTTTCTATTTTCATGGCTA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18470637 28 + 33263144 --------CTTCTGAGAGTTTCTATTTTCACGGCTA i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40810320 16 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C e nomLeu3.chr7b 100374172 1 - 115148730 I a score=619565.000000 s hg38.chr22_KI270876v1_alt 24189 330 + 263666 TTGTAGGCGCCAGTCTGTTGTTTCTGTGCTGAA----TGTTCTAGAAAGTCTGAAGCCAACAtacttggtcgctcaagaaattcctttgttttatctgaaatctagtaactt----cattacattttccc------------------tgctgccaccattcagcaaccatttt------------tcctgggacctagtgt---gctct---------------tttatatctaga-----------------------------aatatttcttcaattttatctttaaatatttgttctgtttacattttccagttttcttctttggggattccaaggagcatatgttggcattagcaaaattcctatttattccatatgtttttgctaaacttttt-tcagcactttatttt s panTro4.chr22 34405756 330 + 49737984 TTGTAGGCGCCAGTCTGTTGTTTCTGTGCTGAA----TGTTCTAGAAAGTCTGAAGCCAACAtacttggtcgctcaagaaattcctttgttttatctgaaatctagtaactt----cattacattttccc------------------tgctgccaccattcagcaaccatttt------------tcctgggacccagtgt---gctct---------------tttatatctaga-----------------------------aatatttcttcaattttatctttaaatatttgttctgttcacattttccagttttcttctttggggattccaaggagcatatattggcattagcaaaattcctatttattccatatgtttttgctaaacttttt-tcagcactttatttt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30814313 330 + 46535552 TTGTAGGCGCCAGTCTGTTGTTTCTGTGCTGAA----TGTTCTGGAAAGTCTGAAGTCAACAtgcttggtcgctcaagaaactcctttgttgtatctgaaatctagtaactt----cattacattttccc------------------tgctgccaccatacagcaaacatttt------------tcctgggacatagtgt---gctct---------------tttatatctaga-----------------------------aatatttcttcaattttatcttcaaatatttgttctgtttacattttccagttttcttctttggggattccaaggagcatatgttggcattagcaaaattcctatttattccatatgtttttgctaaacttttt-tcagcactttatttt i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80520090 331 + 95678458 TTGTAGGCGCCAGTCTGTTGTTACTGTGCTGAA----TGTTCTGGAAAGTCTGACACCAACATGCTTCATtgctcaagacattcctttgttgtatctgaaatctagtaactt----cattacattttgcc------------------tgctgccaccattcagcaaccatttt------------tcctgggacctactgt---gctct---------------cttatatctaga-----------------------------aatatttcttgaattttatctttaaatatttgttctgttcacattttccagttttcttctttgaggattccaaggaccttatgttggcattagcaaaattcctaccttttccatatgtttttgttaaactttttctcagtactttatttt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80942374 331 - 96509753 TTGTAGGCGCCAGTCTGTTGTTTCTGTGCTGAA----TGTTCTGGAAAGTCTGACACCAACATGCTTCATtgctcaagaaattcctttgttgtatctgaaatctagtaactt----cattacattttgcc------------------tgctgccaccattcagcaaccatttt------------tcctgggacctactgt---gctct---------------cttatatctaga-----------------------------aatatttcttgaattttatctttaaatatttgttctgttcacattttccagttttcttctttgaggattccaaggaccttatgttggcattagcaaaattcctaccttttccatatgtttttgttaaactttttctcagtactttatttt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76203765 331 + 90941950 TTGTAGGCGCCAGTCTGTTGTTTCTGTGCTGAA----TGTTCTGGAAAGTCTGACGCCAACATGCTTGGTTGCTCAAGAAATTCCTTTGTTGTATCTGAAATCTAGTAACTT----CATTAcattttgcc------------------tgctgccaccATTCAGCAACCATTTT------------TCCTGGGACCTACTGT---GCTCT---------------CTTATATctaga-----------------------------aatatttcttgaattttatctttaaatatttgttctgttcacattttccagttttcttctttgagGATTCCAAGGAGCATATGTTGGCATTAGCAAAATTCCTACCTTTTCCATATGTTTTTGTTAAACTTTTTCTCAGCACTTTATTTT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18470665 326 + 33263144 TTGTAGGCGCCAGTCTGTTGTTTCTGTGCTGAA----TGTTCTGGAAAGTCTGAAGCCAACAtgcttggttgctcaagaaattcctttgttgtatctgaaatctagtaactt----cattacattttccc------------------tgctgccaccattcagcagccatttt------------tcctgggacctactgt---gctct---------------cttatatctaga-----------------------------aatatttcttgaattttatctttaaatatttgttttgttcacattttccagttttcttctttgaggattccaaggagcatatgttggcattagcaaaattcctacttattccatatgtttttggtaaactttttttcagcac-----ttt i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40810336 391 - 69331447 TTGCAGGCGCCGCTCCGTGGCT-CTATGCCTAAGGGCTGTTATGGAAAGGCTGAAGCCCACATGCTTGG----CCCAGGGGTCCCTTTGTTCTATTTG-AGTCTGACAACTTTGCGTACTCCTTTATGTCCAGAATGATTTCTTGAATTGTAACTATTAttttttaaaggttttatttttaagtcgtctccagacccagtgtggggctctaactcgcgaccccgaccgagatcaagagttgcacgctctgctgactgaaccagctgggtgccccTTGCAATTTAACTTCAAATATTTGTTCTTTTCATGGTTTTTAG---TCTTCTCTGGGAATTCCAATTAGCAGAAGTTGGAGT--------TTTGCCTTTATTGCAt---tttttaaaaagatttta-tc----ctttatttt i canFam3.chr10 I 16 I 1020 e calJac3.chr1 198200869 0 + 210400635 C e nomLeu3.chr7b 100374172 1 - 115148730 I a score=534118.000000 s hg38.chr22_KI270876v1_alt 24519 303 + 263666 cacttcatccctgtcttctatatctttttttttaatagtgtctgttttctcttgtataaaatccaatgagcattgatttttttgtaatgactttatttttctcttctcttctttcctaagctccaccagcttccatgtgctttcctcctgttaccttgccatgtttcctctgagccctcacatctctgttttatgctcttgcattgtaggggaaattccttcactaactttaacaaaattaattacagaagaatgatagtttccatcagcttgctggcagcatgtttctggtgagtgttcttt s panTro4.chr22 34406086 303 + 49737984 cagttcatccctgtcttctatatctttttttttaatagtgtctgttttctcttgtataaaatccagtgagcattgatttttttgtaatgactttatttttctcttctcttctttcctaagctccaccagcttccatgtgctttcctcctgttaccttgccatgtttcctctgagccctcacatctctgttttatgctcttgcattgtaggggaaattgcttcactaacttttaaaaaattaattacagaagaatgatagtttccatcagcttgctggcagcacgtttctggtgagtgttcttt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30814643 301 + 46535552 ctcttcatccctgtcttctgtatc-ttttttttaatagtgtctgttttctcttgtataaaatccaatcagcactga-ttttttgtaatgactttatttttctcttctcttctgtcctaagctccatcagcttccatgtgctttcctcctgttacctcgccgtgtttcctctgagccctcatatctctgtttcatgctcttgcattgtaggggaaattgcgtcactaacttttacaaaattaattacagaagaatgatagtttccatcagcttgctggcagcacgtttctggtgagtgttcttt i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80520421 301 + 95678458 aacttcatccctgtcttctatgtc-tttttcttaatagtgtctattttctcttgtataaaatccaatgagcattaa-ttttttgtaatgagtttatttttctgttctcttctttcctaagctccaccagcttccatttactttcctcctgttaccttgccatgtttcttctgagccctcacgtctctgttttatgctcttacattgtaggggaaattgcttcaccagctttaataaaattaattatagaagaatgatagtttccatcagcttgctggcagcacatttctggtgagtgttcttt i rheMac3.chr10 C 0 I 4049 s macFas5.chr10 80942705 301 - 96509753 aacttcatccctgtcttctatgtc-tttttcttaatagtgtctattttctcttgtataaaatccaatgagcattga-ttttttgtaatgagtttatttttctgttctcttctttcctaagctccaccagcttccatttactttcctcctgttaccttgccatgtttcctctgagccctcacgtctctgttttatgctcttacattgtaggggaaattgcttcaccaactttaataaaattaattatagaagaatgatagtttccatcagcttgctggcagcacatttctggtgagtgttcttT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76204096 301 + 90941950 AACTTCATCCCTGTCTTCTATGTC-TTTTTCTTAATAGTGTCTGTTTTCTCTTGTATAAAATCCAATGAGCATTGA-TTTTTTGTaatgagtttatttttctgttctcttctttcCTAAGCTCCACCAGCTTCCATTTACTTTCCTCCTGTTACCTTGCCATGTTTCCTCTGAGCCCTCACATCTCTGTTTTATGCTCTTACATTGTAGGGGAAATTGCTTCACcaactttaataaaattaattacagaAGAATTATAGTTTCCATCAGCTTGCTGGCAGCACATTTCTGGTGAGTGTTCTTT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18470991 296 + 33263144 aacttcatccctgtcttctatgtc-ttttttttagtagtgtctgtttcctcttgtataaaatccaatgagcattga-ttttttgtaatgagtttattt-----ttctcttctctcctaagctccaccagcttccatttactttcctcctgttaccttgccatgtttcctctgagccctcacatctctgttttatgctcttacattgtaggggaaattgcttcaccaactttaataaaattaattacagaagaatgatagtttccatcagcttgctggcagcacgtttctggtgagtgttcttt i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40810727 1020 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C e nomLeu3.chr7b 100374172 1 - 115148730 I a score=19464.000000 s hg38.chr22_KI270876v1_alt 24822 23 + 263666 atctgctctttgttt---ttgttgtt s panTro4.chr22 34406389 26 + 49737984 atctgccctttgtttttgttgttGTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30814944 23 + 46535552 atctgccctttgttt---ttgttgtt i ponAbe2.chr22 C 0 C 0 s macFas5.chr10 80943006 13 - 96509753 ----------TTTTT---TTGTAGTT i macFas5.chr10 C 0 I 11217 s papAnu2.chr10 76204397 23 + 90941950 ATCTGCcctttgttt---ttgctgtt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18471287 23 + 33263144 atctgccctttgttt---ttactgtt i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40810727 1020 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C e rheMac3.chr10 80520722 4049 + 95678458 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=312893.000000 s hg38.chr22_KI270876v1_alt 24845 409 + 263666 GTTGCTGTCTGCCTTTAGGTCtttctttctttctctttttttttttttttttttttttttttgagacagagtcttgctctgttgccctggctggagtgcagtgctgtgattatggctcactgcagcctcaacatcccaggctctcaaacgatcctcctgcctcagtctcccaagtagctggactacaggtatgcaccactacacctggctaattttttttcttttttattc------ttctttttttttt------gtagagacagggtctcactttgttgtccaggctggtcttgaacttctgggctcaagtgatcctcccgccttggcctcttgaagtgttagcattacaggtgtgagccacctcacccaaccCCTTTTTGTCtatatacttaaatgcctataaatgtgtatatatata s panTro4.chr22 34406415 406 + 49737984 GTTGCTGTCTGCCTTTAGGTTTTTCTTTCtttc---tttcttttttgtttttttttttttttgagacagagtcttgctctgttgccccagctggagtgcagtgctgtgattatggctcactgcagcctcaacctcccaggctctcaaacgatcctcctgcctcagtctcccaagtagctggaatacaggtgtgcaccactacacttggctaa-tttttttcttttttattc-----tttttttttttttt------gtagagacagggtctcactttgttgtccaggctggtcttgaacttctgggctcaagtgatcctcccgccttggcctcttgaagtgttagcattacaggtgtgagccaccgcacccaaccCCTTTTTGTCTATATACTTAAATGCCtataaatgtgtacatatata i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30814967 408 + 46535552 GTTGCTGTCTGCCTTTAGGtctttctttctttc------tttctttctttttttttttttttgagacagggtcttgctctgttgccccggctggagtgcagtgctgtgattatggctcactgcagccttaacctcccaggctctcaaaggatcctcctgcctcagtctcccaagtagctggactacaggtgtgcaccactacacctggctaa-tttttttcttttttatacttcttttttttttttcttt------gtagagacagtgtctcactttgttgtccaggctggtcttgaacttctgggctcaagtgatcctcctgccttggcctcttgaagtgttagcattacaggtgtgagccacctcacccaaccCCTTTTTGTCTATGTACTTAAATGCCTAGAAatgtgtatatatata i ponAbe2.chr22 C 0 I 116 s papAnu2.chr10 76204420 402 + 90941950 gttgctgtctgtctttaggtctttctggt----------tttttttttttgtttttttttttgagacagggtcttgctctattgcccaggctggagtgcagtgctataattacggctcactgcagcctcaatctcccagg--ctcaaacaatcctcctaccgcaatctcccaagtagctgggctacaggtgtgcaccactacacctggctaa-tttttttcttttttattc------tttttttttttttttttaaatagagacaggatctcactttgttgcccaggttggtcttgaacttctgggcccaagcgatcctcccgctttggcctcttGAAGTGTTAgcatcacaggtgtgagccacctcacccaatCCCTTTTTGTCTATATACTTAAATgcctataaatgtgtgtgtgtgtg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18471310 381 + 33263144 GTTGCTGTCTGCCTTTAGGTCtttctg---------------ttttttttttttttttttttgagacagggtcttgctgtgttgcccaggctggagtgcagtgctgtgattacagcgcactgcagcctcaacctcctgga--ctcaaacaatcctcctacctcaatctcccaagtagctgggctacaggtgtgcaccactacacctggctaa-tttttttcttttttattc------ttttttttttttt------gtagagacagggtctcactttgttgcccaggttggtcttgaacttctgggctcaagcgatcctcccactttggcctcttgaagtgttagcatcacaggtgtgagccacctcacccAATCCCTTTTTGTCTATATACTTAAATGCCTATAAA----------TGTG i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40810727 1020 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C e rheMac3.chr10 80520722 4049 + 95678458 I e macFas5.chr10 80943019 11217 - 96509753 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=180.000000 s hg38.chr22_KI270876v1_alt 25254 1 + 263666 c s panTro4.chr22 34406821 1 + 49737984 t i panTro4.chr22 C 0 C 0 s papAnu2.chr10 76204822 1 + 90941950 t i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18471691 1 + 33263144 T i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40810727 1020 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C e ponAbe2.chr22 30815375 116 + 46535552 I e rheMac3.chr10 80520722 4049 + 95678458 I e macFas5.chr10 80943019 11217 - 96509753 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=564032.000000 s hg38.chr22_KI270876v1_alt 25255 694 + 263666 atatatatgtacacacacacacatatatatatatTCGttttaattgtagtgaaatatatataacctgaaattttctatttcaagcattgttaagggtacaggtcagtggcattaggtatattcacattgttgtgcagccatggccaccaacatccacagaactcttgtcctcttgcaaaactgaaactttgccccaagtaaacaataactcctcattcccctcccccagcccctggcaaccacgactctgctccctagcttcatgaatttgactaccctaagaatcccatataaggggaatcctacggcgtgtgtccttttgtgagtggcttatttcacctagcagaatgtctttaaggttcatccatgc-tgtagcatgggtcagaacttccttctggccaggcgcagtggctcacgcctgtaatcccaacactttgggaggccaacgtggatggattacctgaggtcagaagttcaaggccagactggccaacgtggtgaaa-ccccatctctattaaaaataaaaaaatattagccgggcatggtggcacatgcccgtaatccccagctacttgggaggctgaggcaggagaatcgcttgaagccgggagtgggaggttgcagtaagccaagatcacgccattggcactccagcctgggcaacaagagtgaaactctgtctcaaacaacaaca s panTro4.chr22 34406822 692 + 49737984 acatatatatatacacacacac--atatatatatTCGttttaattgtagtgaaatatatataacctgaaattttctatttgaagcattgttaagggtacaggtcagtggcattaggtatattcacattgttgtgcagccatggccaccaacatccacagaactcttgtcctcttgcaaaactgaaactttgccccaagtaaacaataactcttcattcccctcccccagcccctggcaactacgactctgctccctagcttcatgaatttgactaccctaagaatcccatatgaggggaatcctacggcgtgtgtccttttgtgagtggcttatttcacctagcagaatgtctttaaggttcatccatgc-tgtagcatgggtcagaacttccttctggccaggcgcagtagctcacgcctgtaatcccaacactttgggaggccaatgtggatggattacctgaggtcagaagttcaaggccagactggccaacatggtgaaacccccatctctattaaaaataaaaaaatattagccaggcatggtggcacatgcccgtaat-cccagctactcgggaggctgaggcaggagaatcgcttgaagccgggagtgggaggttgcagtaagccaagatcatgccattggcactccagcctgggcaacaagagtgaaactctgtctcaaacaacaaca i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30815491 691 + 46535552 atatatatgtacacacacacac--atatatatatTCAttttaattgtagtgaaatatatataacctgaaattttctatttcaagcattgttaagggtacaggtcagtggtattaggtatattcacattgttgtgcagccacggccaccaacatccacagaactcttgtcctcttgcaaaactgaaactttgccccaagtaaacaataactcctcattcccctcccccagcccctggcaaccacgactctgctccctagcttcatgaatttgactaccctaagcatcccatatgaggggaatcctacggcgtgtgtccttttgtgagtggcttatttcacctagcagaatgtctttaaggttcatccgtgc-tgtagcatgggtcagaacttccttctggccaggcgcagtggctcacgcctgtaatcccaacactttgggaggccaatgtgggtggattacctgaggtcagaagttcaaggccagactggccaacatggtgaaa-ccccatctctattgaaaataaaaaaatattagccaggcatagtggcacatgcccgtaat-cccagctactcgggaggctgaggcaggagaatcacttgaaggcgggagtgggaggttgtagtaagccgagatcacgccattggcactccagcctgggcaacaagagtgaaactctgtctcaaacaacaaca i ponAbe2.chr22 I 116 C 0 s papAnu2.chr10 76204823 670 + 90941950 ----gtgtgtgtgt----------gtgtatatattcattttaattatagtGAAATATATACAACCTAAAGTTTTCTATTTCAAGCATTGTTAAATGTACAGGTCAGTGGCATTAGGTGcactcacattgttgtgcagccatgGCCACCACCATCTACAGAa--------ctcttgcaaaactgaaactttgcTCCAAGTAAAT-ATAACTCCtcattcccctcccccagcccctggcaaccgcCACTCCTCTCCCTAGCTTCATGAATTTGACTACCCTAAGAATCCCATATGAGGGGAATCCTACAGCATGTGTCCTTTTATgagtggcttatttcacctagcagaatgtctttaaggttcatccatgcttgTAGCATGGGTCAGAACTTCCTTCTGGCCAAGCAccgtggctcaggcttgtaatcccaacactttgggaggctaaggtgggtggataacctgaggtcagaagttcaaggccagactggctaacatggtgaaa-ccccgtctctactaaaaataaaaagatattagccgggcatggtggcatatgcctgtaat-ctcagctactcgggaggctgaggcaggagaatcgcttgaagctgggagggggaggttgcagtgagccaagatcgtgccatt-gcactccagcctgggcaacaatagtggaactctgtctcaaacaacaaca i papAnu2.chr10 C 0 I 1340 s chlSab2.chr19 18471692 666 + 33263144 ----GTGTGTACAT----------ATATATATATttattttaattatagtgaaatatttataacctaaagttttctatttcaagcattgttaagtgtacaggtcagtggcattaggtgcactcacattgttgtgcagccatggccaccatcatccacagaa--------ctcttgcaaaactgaaactttgccccaagtaaac-ataactcctcattcccctcccccagcccctggcaaccgccactcctctccctagcttcatgaatttgactaccctaagaatcccatatgaggggaatcctacagcgtatgtcc---tgtgagtggcttatttcaccgagcagaatgtctttaaggttcatccatgc-tgtagcgtgggtcagaacttccttctggccaggcaccgtggctcaggcctgtaatcccaacactttgggaggccaaggtgggtggataacctgaggtcagaagttcaaggccagactggccaacatggtgaaa-ccccgtctctactaaaaataaaaaaatattagccgggcacggtggcacatgcctgtaat-ctcagctactcgggaggctgaggcaggagaatcgcttgaagccgggagggggaggttgcagtgagccgagatcgtgccatt-gtactccagcctgggcaacaatagtggaactctgtctcaaacaacaaCA i chlSab2.chr19 C 0 I 1201 e canFam3.chr10 40810727 1020 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C e rheMac3.chr10 80520722 4049 + 95678458 I e macFas5.chr10 80943019 11217 - 96509753 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=83279.000000 s hg38.chr22_KI270876v1_alt 25949 325 + 263666 acaacaaaaaaagcaaacaaacaaaaaagacttccttctttcttgaggaggaataatagttcatgatgtgtatatatcaccttttggtcatccattcatccatcaatggacagttggcttgtttccacattttggctattgtgagtaattctgctataaccattgttatacaaatatctctttgagaccctgctttcaattctcttggg--tatatatatacccagaagtggaattgctggatcatatgttagttttatttttaattttttgaggaaccaccctgttgttttacacaaggtgaaaaacgtgttgttttttatggacc s panTro4.chr22 34407514 317 + 49737984 acaacaaaaaaagcaaacaaacaaaaaagacttccttctttcttgagtaggaataatagttcatgatgtgtatatatcaccttttgg--------tcatccatcaatggacagttggcttgtttccacattttggctattgtgagtaattctgctataaccattgttatacaaatatctctttgagaccctgctttcaattctcttggg--tatatatatacccagaagtggaattgctggatcatatgttagttttatttttaattttttgaggagccaccgtgttgttttacacagGGTGAAAAACGTGTTGTTTTTTATGGACC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30816182 327 + 46535552 acaaaaaaaaaaacaagcaaacaaaaaagacttccttctttcttgaggaggaataatagttcatgatgtgtatgtatcaccttttgttcatgcattcatccatcaatggacagttggcttgtttccacattttggctattgtgagtaattctgctataaccattgttatacaaatatctctttgagaccctgctttcaattcttttgggtatatatatatacccagaagtggaattgctggatcatacgtcagttttatttttaattttttgaggaaccgtcctgttgttttacacagggtaaaaaacgtgttgttttttatggacc i ponAbe2.chr22 C 0 C 0 e canFam3.chr10 40810727 1020 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C e rheMac3.chr10 80520722 4049 + 95678458 I e papAnu2.chr10 76205493 1340 + 90941950 I e macFas5.chr10 80943019 11217 - 96509753 I e chlSab2.chr19 18472358 1201 + 33263144 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=44079.000000 s hg38.chr22_KI270876v1_alt 26274 520 + 263666 agctatcttacacagcagctgcattattttccactcccaccggcaattcacaagcattccaacttgtccacaATATATATTTCACCATGTTTttccttccttccttccttccttccttc------------------------------------cttccttccttccttccttc------------------------cctccctccctccctctcttcctcccttcctttcttccttccttccCTCacggagttttgctcttgtcgcccaggctggagtgcagtggcatgatctcagctcactgcaacctttgtctcccaggttcaggtgattcccctgcctcagcctcccaagtagctgggattacaggtatgcaccaccacacctggttaatttttgtattttagtggagacggggtttcgccatgttggccaggctggttttgaactcctgacctcaggtgatctacctgcctcaacctcctaaagtgttgggattacaggtgtgagccaccgcgcccagccTTCtgttgttgttgtgttttgttgttgttgttgctgtttgtttgttttttgag s ponAbe2.chr22 30816509 579 + 46535552 agctatcttgcacagcagctgcattattttccacttccaccagcaattcacaagcattccaacttctccacaatatatatttcaccatgtttttccttccttccttccttccttccttctttacttccttccttacttccttccttccttccttccttccttccttccttccttctctccctccctccctccctctctccctccctccctccctctctccctcccttcctttcttccttccttccctcatggagttttgctcttgtcgcccaggctggagtgcagtggcatgatctcagctcactgcaacctttgtctcccgggatcaggtgattcccc-gcctcagcctcctgagtagctgggattacaggtatgcgccaccacacctggttaatttttgtattttagtagagacggggtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatctacctgcctcaacctcctaaagtgttgggattacaggtgttagccaccgtgcccagccTTCtgttgttgttgtgttttgttgttgttgttgttgttTGtttgttttttgag i ponAbe2.chr22 C 0 C 0 e canFam3.chr10 40810727 1020 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C e rheMac3.chr10 80520722 4049 + 95678458 I e panTro4.chr22 34407831 0 + 49737984 C e papAnu2.chr10 76205493 1340 + 90941950 I e macFas5.chr10 80943019 11217 - 96509753 I e chlSab2.chr19 18472358 1201 + 33263144 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=34482.000000 s hg38.chr22_KI270876v1_alt 26794 181 + 263666 acagggtctcactc-tgtcacccaggctggagtgcagtggtgctatcatggctcactgcagcttcaacctcctgggctcaagtgatcctcccatttcagcctcctcagtagctggg-acacaggcatgtgcatcatacctggctaattattttattttatttttgtggagacagggtctctct s ponAbe2.chr22 30817088 181 + 46535552 acagggtctcactc-tgtcacccaggctggagtgcagtggtgctatcatggctcactgcagcttcaacctcctgggctcaagtgatcctcccatttcagcctcctcagtagctggg-acacaggcatgtgcatcatacctggctaattattttattttatttttgtggagacagggtctctct i ponAbe2.chr22 C 0 C 0 s papAnu2.chr10 76206833 178 + 90941950 acggagttttgctcttgccgcccaggctggagtgcagtggtgtgatctcagctcacagcaacctctgcctcccaggttcaagtgattcccctgcctcagcctcccgagtagctgggtttacaggcgtcaccaccacacctggttaatttttgtatttta-----gtagagacggggtttggcc i papAnu2.chr10 I 1340 C 0 e canFam3.chr10 40810727 1020 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C e rheMac3.chr10 80520722 4049 + 95678458 I e panTro4.chr22 34407831 0 + 49737984 C e macFas5.chr10 80943019 11217 - 96509753 I e chlSab2.chr19 18472358 1201 + 33263144 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=233984.000000 s hg38.chr22_KI270876v1_alt 26975 283 + 263666 atgttgcccagcctgatctcaaactcctggactcaaatgatcctcctgccccaacctcccaaagtgctgggattacaggcatgagccaccacacccggcTCATTTTTATTTTTCGGTAAGAGTCGTCTGCATAAGTGTGAAGTGGTATTTCATGTGGTTTTCAAAATAATTATTattttttaattttttgtggagacagagtctcactattgttgcccaggttggtcttgaactcctagcctcaagtgatcctcccaccttagcctcccaacatgttgggatt s ponAbe2.chr22 30817269 283 + 46535552 atgttgcccagcctgatctcaaactcctggactcaaatgatcctcctgccccaacctcccaaagtgctgggattacaggcatgagccaccacacctggctcatttttatttttcggtaagagtcatctgcataagtgtgaagtggtatttcatgtggttttCAAAATAATAATTattttttaattttttgtggagacagagtcttgctattgttgcccaggttggtcttgaactcctagcctcaagtgatcctcccaccttagcctcccaacatgttgggatt i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80524771 280 + 95678458 atgttggccaggctggtcttgaactcctgaactcaggtgatctacccacctcagcctcccaaagtgctgggattacaggcgtgagccaccacacccggcTCA-TTTTAttttttggtaagagtcatctgcataagcgtgaagtggtatctcatgtggttttCAAAATAATTATTattttttaattttttgtggagac--agtgttgccattgttgcccagcttggtcttgaactcctagcctcaagcaatcctcccaccttagcctcccaacatactgggatt i rheMac3.chr10 I 4049 C 0 s papAnu2.chr10 76207011 283 + 90941950 atgttggccaggctggtcttgaactcctgaactcgggtgatccactcgcctcggcctcccaaagtgctgggattacaggcgtgagccaccacacctggctcatttttattttttggtaagagTCATCCGCATAAGCGTGAAGTGGTATCTCCTGtggttttcaaaataatttttattttttaattttttgtggagacagagtgtCGCCGTTGTTGCCCagcttgatcttgaactcctagcctcaagcgatcctcccaccttagcctcccaacatactgggatt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18473559 283 + 33263144 atgttggccaggctggtcttgaactcctgaactcgagtgatccacctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccacacccggctcatttttattttttggtaagagtcatctgcataagcgtgaagtggtatctcatgtggttttCAAAATAATTATTattttttaattttttgtggagacagagtgtcaccgttgttgcccagcttgatcttgaactcctagcctcaagcgatcctcccaccttagcctcccaacatactgggatt i chlSab2.chr19 I 1201 C 0 e canFam3.chr10 40810727 1020 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C e panTro4.chr22 34407831 0 + 49737984 C e macFas5.chr10 80943019 11217 - 96509753 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=499014.000000 s hg38.chr22_KI270876v1_alt 27258 503 + 263666 acaggcataagccaccgtacctaacctcgttgtggttttgatttgcattttcctaatgattagaggtgttgggcatcttttcacatgcttattggcacatatt-------------gggagaaatatctattcacatcctttgtccattttaaaaattggg-ggttttttgttattaa---------ttttttttgtgtagaccttgtgttgatggcttttcttcttttcatggaccagctatttatggaaaattaaa--tagaaaaaagccagggctgtgttctaggctagcagaactgttctttatgacctgggccttctacctgaatttctagtatatatttctccccagcaatggaatt-ggcagttttcagattgttcacaaggtggagtcttttcccctctctgcctcaaaaacaaactgcttcctacaaatatggcttgtctcactgtgtttcctcatttagtcctatcgtcactgctttgtggaaccaatccggattcactgccaacctgtacaccttagt s ponAbe2.chr22 30817552 503 + 46535552 acaggcataagccaccTTACCTAacctcgttgtggttttgatttgcattttcctaatgattagagatgttgggcatcttttcacatgcttattggcacatatt-------------gggagaaatatctattcacatcctttgtccattttaaaaattggg-ggttttttgttattaa---------tttTTTTTGTGTAGACCTCGTGTTGATGGCTTTTCTTCttttcatggaccagctctttatggaaaattaaa--tagaaaaaagccagggctgtgttctaggctagcagaactgttctttatgacctgggccttctacctgaatttctagtatgtatttctccccagcaatggaatt-ggcagttttcagattgttcacaatgtggagtcttttcccctctctgcctcaaaaacaaactgcttcctacaaatatagcttgtctcactgtgtttcctcatttagtcctatcttcactgctttgtggaaccaatccggattcactgccaacctgtacaccttagt i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80525051 504 + 95678458 acaggcataagccaccgtgcctaacctcattgtggttttgattcgcattttcctaatgattagagacgctgggcatcttttcacatgctcattggcacgtatt-------------gggagaaatacctattcacgtcctttgtccattttaaaaattgag-gtttttttgttattaat--------ttTtttttgtgtagaccttgtgttgatggcttttcttcttttcatgggccagttacttagggaaaattaaa--cagaaaaatgccaggactgtgttctaggatagcagaactgttctttatgacctacgccttccacctgaatttctagtatatatttctccccagcaatggaatt-ggcagttttcagattgttcacaatgtgaggtgttttcccctctctgcctcaaaaacaaactgcttcctacaaatatggcttgtctcactgtgtttcctcatttagtcatatcttcactgctttgtgaaaccaatccggattcactgccaacctgtacaccttagt i rheMac3.chr10 C 0 C 0 s papAnu2.chr10 76207294 506 + 90941950 acaggcataagccaccgtgcctaacctcattgtggttttcattcgcattttcctaatgattagagacgttgggcatcttttcacatgctcaTTGGCACATATt-------------gggagaaatatctattcatgtcctttgtccattttaaaaattgggtttttttttgttattaat-------attttttttgtgtAGACCTTGTGTTgatggcttttcttcttttcatgggCCAGTTACTTAgggaaaattaaa--tagaaaaaagccaGGGCTGTGTTCTAGGATAGCAGAACTGTTCTTTATGACCTAGGCCTTCCACCTGAATTTCTAGTATATGTTTCTCCCCAGCAATGGAATT-GGCAGTTTTCAGATTGTTCACAATGTGAGGTGTTTTCCCctctctgcctcaaaaacaaactgCTTCCTACAAATATGACTTGTCTCACTGTGTTTCCTCATTTAGTCATATCTTCACTGCTTTGTGAAACCAATCCGGATTCACTGCCAACCTGTACACCTTAGT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18473842 469 + 33263144 acaggcataagccaccgtgcctaacctcattgtggttttgattcgcattttcctaatgattagagacgttgggcatcttttcacatgctcattggcacatatt-------------gggagaaatatctattcacgtcctttgtccattttaaaaattggg-gtttttttgttattaat-------attttttctgtgtagaCCTTGTGTTGATGGCTTTTCTTCTTTTTGTgggccagttac--------------------------------------ttctaggatagcagaactgttctttatgacctaggccttccacctgaatttctagtatatattcctccccagcaatggaatt-ggcagttttcagattgttcacaatgtgaggtgttttcccctctctgcctcaaaaacaaactgcttcctacaaatatggcttgtctcattgtgtttcctcatttagtcatatcttcactgctttgtgaaaccaatccggattcattgccaacctgtacaccttagt i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40811747 497 - 69331447 acaggcatgag--atggt-----atctcattgtgattttgatttgcatttccctgatgataagtgac-ttgagcatcttttcatgggcttcttgac---tatttgtatgtctcctctggagtgacagctactcaagtcctttgccca--tgggaggctgat-tgttttttgttgttgagttaataatttttttgtgtgtAGACCTTGTTTTGGTTGCCTG-----ttttcatggaacagctgtttatgggagactcagataaggaagaggataggactg--ttccatgccagggaaacagttctttctgatgtgggcattctacataagttcct-gtttctgtctcccgcagacagtggaatcaggtagttttcaaac--ttcacgatgcagactctcttctcctctccatttagaggacaaactgcttcctacagatacggctggtctcactgtgttacttcatttagtc-------cattgattcttggatcc-attcgaatttggtgccaacttgtacactttatt i canFam3.chr10 I 1020 I 188 e calJac3.chr1 198200869 0 + 210400635 C e panTro4.chr22 34407831 0 + 49737984 C e macFas5.chr10 80943019 11217 - 96509753 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=0.000000 s hg38.chr22_KI270876v1_alt 27761 22 + 263666 ggattcactgccaacctgtaca e canFam3.chr10 40812244 188 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C e ponAbe2.chr22 30818055 0 + 46535552 C e rheMac3.chr10 80525555 0 + 95678458 C e panTro4.chr22 34407831 0 + 49737984 C e papAnu2.chr10 76207800 0 + 90941950 C e macFas5.chr10 80943019 11217 - 96509753 I e chlSab2.chr19 18474311 0 + 33263144 C e nomLeu3.chr7b 100374172 1 - 115148730 I a score=47551.000000 s hg38.chr22_KI270876v1_alt 27783 79 + 263666 ccttagtcttactattttgaacacagcattctattgttgcactttgggaacacccattgccttgaagagaggcttttct s ponAbe2.chr22 30818055 72 + 46535552 -------cttactattttgaacacggcgttttattgttgcactttggggacacccctcatcttgaagagaggcttttct i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80525555 51 + 95678458 -------cttactattttga--acagagttttattgttgcactttggggatacccctcac------------------- i rheMac3.chr10 C 0 C 0 s papAnu2.chr10 76207800 53 + 90941950 -------CTTACTATTTTGAACACAGAGTTTTATTGTTGCACTTTGGGGATACCCCTCAC------------------- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18474311 53 + 33263144 -------cttactatttggaacacagcgttttattgttgcactttggggatacccttcac------------------- i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40812432 78 - 69331447 ccatattctcactattttaaaga-aggattttatttctgcactttgggaatgcccttcaccttgaaaagggacttcttt i canFam3.chr10 I 188 I 171 e calJac3.chr1 198200869 0 + 210400635 C e panTro4.chr22 34407831 0 + 49737984 C e macFas5.chr10 80943019 11217 - 96509753 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=952740.000000 s hg38.chr22_KI270876v1_alt 27862 939 + 263666 tttctctgaaatttgcagttatcaacatcttctctcctcttcctcccaaagccctgctcattcccattgcttttggcatccttt--------------------------------taatct---------------------agtttatc---------------------------------------------------------------------tattttccctcgtctctaatagatggtatttgcttcattttccttgttgcttatgggtaatttttgaaagaagagaaattgagaatgtgatccattcatgttca----aaccagaagtcTTTGCAAGCACTTCTGAGAGTTGCTGTACTATGATGGAGATAGCGAGAGGCTTGACAGCGAAAGAAACAGATGCTGGGGTCCCTCCCTGCACCCTC-TCTCTGGGGTAGCTTCCTCTGAGTTATTCCTCAACCCCTCCACCTACCATTGGTGTTTCCCA--GCTCCAGCCTCAGTGCTCTTCTCCCCTCTAAGCTCTCCATCCTCCGTGGATTTTATCTGTTTACGAATTCCCATCTCGGAGTCACCAGGCCTCAGCTCCGTATGGCGCCCCGCCACTCATCGCCTCTCTGAATGACTGTGGGGTCGG-TTTTCTTCTTTAGGAGGGGAAGCTGCCTCTCTTCCGGCCTAGGATCCATTGTCATCTGCAGAGAGAGAAGTGCCAAGGGATCCTCAGAGATACCATGACTGCAGCACCAACCAAAATCCACCCAGGTAATCCTCTCCTG--TTCAGTAAATTCTCTTGACCCCAGCTCACTGTCCCCACCTACAACGGGAGATGCTAGAGATTATGAAGTGACTTGAGGCACTGGATGTGGCTGATCCTGGGTCCGAAAGTGAAGGTGAGGAACTAAAGTCCCTTTCTTGCCCTATCTCCCATGAGATTCTGCTCACACTCCTCCTACAATTAGAGACCTCTCATCCTGGGTTCCTTAGCTGTGGTGACTGTATTTCATGAACCTCAGATCCAGATACATACTCAAGTCAGAATACAACATCTGTGTTggccg s ponAbe2.chr22 30818127 938 + 46535552 tttctctgaaatttgcagttatcaacatcctctctcctcttcctcccaaagccctgctcattcccattgtttttggcatccttt--------------------------------taatct---------------------agtttatc---------------------------------------------------------------------tattttccctcatctctaatagatggtatttgcttcattttccttgttgcttatgggtaatttttgaaagaagagaaattgagaatgtgatccattcatgttca----aaccagaagtcTTTGCAAGCACTTCTGAGAGTTGCTGTATTATGACGGAGACAGCGAGAGGCTTGACAGCGAAAGAAACAGATGCTGGGGTCCCTCCCTGCACCCTC-TCTCTGGGGCAGCTTCCTCTGAGTTATTCCTCAACCCCTCCACCTACCACTGGTGTTTCCCA--GTTCCAGCCTCAGTGCTCTTCTCCCCTCTAAGCTCTCCATTCTCTGTGGATTTTATCTGTTTACGAATTCCCATCTCGGAGTCACCAGGCCTCAGCTCCATATGGCGCCCCGCCACTCATCGCCTCTCTGAATGACTGTGGGGTCAG-TTTTCTTCTTTAGGAGGGGAAGCTGCCTCTCTTCTGGCCCAGGATGCATTGTCACCTGCAGAGAGAGAAGCGCCAAGGGATCCTCAGAGATACCATGACCGCAGCACCAACCAAAATCCACCCAGGTAATCCTCCCCTG--TTCAGTAAATTCTCTTGACCCCAGCTCACTGTCTCCATCTACGACAGGAGATGCTAGAGATTACGAAGTGACTTGAGGCACTGGATGTGGCTGATCCCAGGTCCGAAAGTGAAGGTGAGGAACTAAAGTCCCTTTCCTGCCCTATCTCCTGTAAGATTCTGCTCACACTCCTCCTACAATTAGAGACCTCTCATCCTGGGTTCCTTAGCTGTGGTGACTGTATTTCATGAACCTCAGATCC-GATACATACTCAAGTCGGAATACAACATCTGTGTTggccg i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80525606 932 + 95678458 -----ctGAAATTTGCATTTATCAACATCCTCTCTCCTCTTGCTCCCAAAGCCCTGCTCATTCCCATTGCTTTCGGCATCCTTT--------------------------------TAATCT---------------------AGTTTATC---------------------------------------------------------------------TATTTCCCCTAGTCTCTAATAGATGGTATCTGtttcattttccttgctgcttatgggtaatttttgaaagaagagaaattgagaatgtgatccattcatgttca----aaccagaagtcTTTGCAAGCACTTCTGAGAGTTACTGTATTATGATGGAGACAGTGAGAGGCTTGACAGCAAAAGAAACAGATGCTGGGGTCCCTCCCTGCACCCTC-TCTCTGGGGCAGCTTCCTCTGAGTTATTCCTCGACCCCTCCACCTACCATTGGTGTTTCCCA--GCTCCAGCCTCAGTGCTCTTCTCCTCTTCAAGCTCTCCATCCTCCGTGGATTTTA--TGTTTACAAATTCCCATCTTGGAGTCACCAGGCCTCAGCTCCATATGGCGCCCAGCCACTCATTGCCTCTCTGAATGACTGTGGGGTTGG-TTTTCTTCTTTAGGAGGGGAAGCCGCATCTCTTCCGGCCCAGGATCCATTGTCACCTGCAGAGAGAGAAGCGCCAAGGGATCCTCAGAGACACCATGACGGCAGCGCCAACCAAAATCCACCCAGGTAATCCTCCCCTG--TTCAGTAAGTTCTCTTGACCCCAGCTCACTGTCCCCACCTACGATGGGAGATGCTAGAGATTATGAAGTGACTTGAGGTACTGGATGTGGCTGTTCCCGGGTCCGAAAGTGAAGGTGAGGAACTAAAGTCCCTTTCCTGCCCTATTTCCCATGAGATTCTGCTCACGCTCCTCCTACAATTAGAGACCTGTCATCCTGGTTTCCTTAGCTATGGTGACTATACTTCACGGACCTCAGATGCGGATACATACTCAAGTCAGAATACAACATCTGTGTTGGCCG i rheMac3.chr10 C 0 C 0 s papAnu2.chr10 76207853 932 + 90941950 -----CTGAAATTTGCATTTATCAAcatcctctctcctcttcctcccaaagcccTGCTCATTCCCATTGCTTTCGGCATCCTTT--------------------------------TAATCT---------------------AGTTTATC---------------------------------------------------------------------TATTTCCCCTAGTCTCTAATAGTTGAtatctgtttcattttccttgttGCTTATGGGTactttttgaaagaagagaaattgagAATGTGATCCATTCATGTTCG----AACCAGAAGTCTTTGCAAGCACTTCTGAGACTTACTGTATTATGATGGAGACAGGGAGAGGCttgacagcaaaagaaacagatgCTGGGGTCCCTCCCTGCACCCTC-TCTCTGGGGCAGCTTCCTCTGAGTTATTCCTCGACCCCTCCACCTACCATTGGTGTTTCCCA--GCTCCAGCCTCAGTGCTCTTCTCCTCTTCAAGCTCTCCATCCTCCGTGGATTTTA--TGTTTACGAATTCCCATCTTGGAGTCACCAGGCCTCAGCTCCATATGGCGCCCAGCCACTCATTGCCTCTCTGAATGACTGTGGGGTTGG-TTTTCTTCTTTAGGAGGGGAAGCTGCATCTCTTCCGGGCCAGGATCCATTGTTACCTGCAGAGAGAGAAGCGCCAAGGGATCCTCAGAGACACCATGACTGCAGCGCCAACCAAAATCCACCCAGGTAATCCTCCCCTG--TTCAGTAAGTTCTCTTGACCCCAGCTCACTGTCCCCACCTATGATGGGAGATGCTAGAGATTATGAAGTGACTTGAGGTACTGGATGTGGCTGTTCCCGGGTCCGAAAGTGAAGGTGAGGAACTAAAGTCCCTTTCCTGCCCTATTTCCCATGAGATTCTGCTCACGCTCCTCCTACAATTAGAGACCTGTCATCCTGGTTTCCTTAGCTATGGTGACTGTACTTCACGAACCTCAGATCTGGATACATACTCAAGTCAGAATACAACATCTGTGTTGGCTG i papAnu2.chr10 C 0 I 388 s chlSab2.chr19 18474364 932 + 33263144 -----ctgaaatttgcatttatcaacatcctctctcctcttcgtcccaaagccctgctcattcccattgctttcggcatccttt--------------------------------taatct---------------------agtttatc---------------------------------------------------------------------tatttcccctagtctctaatagatggtatctgtttcattttccttattgcttatgggtagtttttgaaagaggagaaattgagaatgtgatccattcatgttca----aaccagaagtcTTTGCAAGCACTTCTGAGAGTTACTATATTATGATGGAGACAGTGAGAGGCTTGACAGCAAAAGAAACAGATGCTGTGGTCCCTCCCTGCACCCTC-TCTCTGGGGCAGCTTCCTCTGAGTTATTCCTCGACCCCTCCACCTACCATTGGTGTTTCCCA--GCTCCAGCCTCAGTGCTCTTCTCCCCTTCAAGCTCTCCATCCTCCGTGGATTTTATCTGTTTACGAATTCCCATCTTGGAGTCACCAGGCCTCAGCTCCATATGGCGCCCAGCCACTCATTGCCTCTCTGAATGACTGTGGGATTGG-TTTTCTTCTTTAGGAGGGAAAGCTGCATCTCTTCCGGCCTAGGATCCATTGTCACCTGCAGAGAGAGAAGCGCCAAGGGAGCCTCAGAGACATCATGACCACAGCGCCAACCAAAATCCACCCAGGTAATCCTCCCCTG--TTCAGTAAATTATCTTGACTCCAGCTCACTGTCCCCACCTACGATGGGAGATGCTAGAGATTATGAAGTGACTTGAGGTACTGGATGTGGCTGTTCCCGGGTCCGAAAGTGAAGGTGAGGAACTAAAGTCCCTTTCCTGCCCTATTTCCCATGAGATTCTGCTCACGCTCCTCCTACAATTAGAGACCTCTCATCCTGGTTTCCTTAGCTATGGTGACTATCCTTCACGAACCTCAGATGCGGATACATACTCAAGTCAGAATACAACATCTGTGTTGGC-- i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40812681 986 - 69331447 tttcttcttctttcacaattattggcatcatctctccttttcctgccaaagtcctacttatttttctggcttt-ggcatcctttAGAAAAATAGGAAAAATATTACCTAtttttcatagtttctttttttaaagatttttaaaaatttatttgagagagagagagagcacgagcagggggacaggcagaaggagaagtagactccccgctgagtagggagTATTTTCCATAGTTTCTAATAGATGATGTCTGTATC-CTTTCCTTGTTGCTTTTGAATAATTGCC-----AAGAGAAGCTGACAACTTGATCCATTCATCATCCATTTATCCAGAAGTCC-----AGCAC----------CACCGCAGGATAATGGAGACAG----------------AAAAGAAAC---TTCTG-GATCCCTCCCTCTACTTCCACCTTTTGGGCAACTTCCCCTGAGTT------------------------TTAGAGGCTCCCATGGTTCCATCCTTGTCTCTCTCCCTGCTTCTTGGCTCACCATCTTCCATGGATGCCATATGTTTACAAATTCCTAGGTCTGACTCCCTAGGTGCCATCTC----TGGC-----------TATTGCCCCTCTGAATGACTGTGGGGTCTGTTTTTTTTCTTTATGAGGTAAAGCTGCATCACTTCTAGCTCAGGACCCTTTGTCATCTGTAGAGAAAGAAGTGCCAAGGAGCCATCAGAG-CATCCTGACTACAGCATCCCCTGGAATCTGCCCAGGCAACATTGCCCTTCCCTCAGTAGATTCTTCTGCTCACAG--CACAGTCTCAACTTATAATGAGACATGCTTGAGATTGGCAAGTGACTTGGGGCCCTCAATATGAGTGATCCCAGTTCCTAAAGAGAAGGTGAGGGTCTAAGGCCTCATTTCCACTCTCTTTCCCACAAGATCCAGCTCATACCCCTCTCATGATTTGAGACATCCCATCCAGGGCCCCTTAGCTACAGGGACCATATTTTATGAACCTCAAATCAGAGTATAGATTCAGATTGAGATGCAATGTCTGCATGGGCC- i canFam3.chr10 I 171 C 0 e calJac3.chr1 198200869 0 + 210400635 C e panTro4.chr22 34407831 0 + 49737984 C e macFas5.chr10 80943019 11217 - 96509753 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=10776.000000 s hg38.chr22_KI270876v1_alt 28801 31 + 263666 ggcgcggtggctcaagcctgtaatcccagca s ponAbe2.chr22 30819065 31 + 46535552 ggcgcggtggctcaagcctgtaatcccagca i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80526538 26 + 95678458 ----TACtggc-caagcctgtaatcccagca i rheMac3.chr10 C 0 C 0 s chlSab2.chr19 18475296 28 + 33263144 --CATAgtggc-caagcctgtaatcccagca i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40813667 15 - 69331447 ----------------CCACTGATCCCTGCA i canFam3.chr10 C 0 C 0 e calJac3.chr1 198200869 0 + 210400635 C e panTro4.chr22 34407831 0 + 49737984 C e papAnu2.chr10 76208785 388 + 90941950 I e macFas5.chr10 80943019 11217 - 96509753 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=63591.000000 s hg38.chr22_KI270876v1_alt 28832 125 + 263666 ctttgggaggtcaaggcaggtggatcacttgaggtcaggagtttaagaccagcttggccaacatggtgaaaccccgtctctactaaaaacacaaaaattagccaggcgtggtggtgcgcacctgt s ponAbe2.chr22 30819096 125 + 46535552 ctttgggaggtcgaggcaggcggatcacttgaggtcaggagtttaagaccagctcggccaacatggtgaaaccccgtctctactaaaaacacaaaaattagccaggcgtggtggtgtgcacctgt i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80526564 125 + 95678458 ctttgggaggctgaggcaggtggatcacttgaggtcaggagtttaagaccagcctggccaacatggtaaaaccccatctctactaaagatacaaaaattagccaggcatggtggtgcacacctgt i rheMac3.chr10 C 0 C 0 s chlSab2.chr19 18475324 125 + 33263144 ctttgggaggttgaggcaggtgtatcacttgaggtcaggagtttaagaccagcctggccagcatggtgaaatcctatctctacgaaagatacaaaaattagccaggcatggtggtgcgcacctgt i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40813682 0 - 69331447 C e calJac3.chr1 198200869 0 + 210400635 C e panTro4.chr22 34407831 0 + 49737984 C e papAnu2.chr10 76208785 388 + 90941950 I e macFas5.chr10 80943019 11217 - 96509753 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=12801.000000 s hg38.chr22_KI270876v1_alt 28957 21 + 263666 aatcccagctacttggaaggc s ponAbe2.chr22 30819221 21 + 46535552 aatcccagctacttggaaggc i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80526689 21 + 95678458 aatcccagctactcggaaagc i rheMac3.chr10 C 0 C 0 s chlSab2.chr19 18475449 21 + 33263144 aatcccagctactcggaaggc i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40813682 17 - 69331447 ACTCTCAACT----GGTAGGC i canFam3.chr10 C 0 C 0 e calJac3.chr1 198200869 0 + 210400635 C e panTro4.chr22 34407831 0 + 49737984 C e papAnu2.chr10 76208785 388 + 90941950 I e macFas5.chr10 80943019 11217 - 96509753 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=27766.000000 s hg38.chr22_KI270876v1_alt 28978 52 + 263666 taaggcaggagaatcgcttgaacctgggcggcggaggttgcagtgagctgag s ponAbe2.chr22 30819242 52 + 46535552 taaggcaggagaatcgcttgaacctgggaggcggaggttgcagtgagctgag i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80526710 52 + 95678458 tgaggcaggagaatcgcttgaacctgggaggcggaggtcgcagtgaactgag i rheMac3.chr10 C 0 C 0 s chlSab2.chr19 18475470 52 + 33263144 tgaggcaggagaattgcttgaacctgggaggcggaggttgcagtgagctgag i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40813699 0 - 69331447 C e calJac3.chr1 198200869 0 + 210400635 C e panTro4.chr22 34407831 0 + 49737984 C e papAnu2.chr10 76208785 388 + 90941950 I e macFas5.chr10 80943019 11217 - 96509753 I e nomLeu3.chr7b 100374172 1 - 115148730 I a score=45600.000000 s hg38.chr22_KI270876v1_alt 29030 62 + 263666 accatgccactgcattccagcctggatgacagagcaagattctgtctcaa-----aaaaataaaaat s ponAbe2.chr22 30819294 61 + 46535552 accacgccactgcattccagcctgggtgacagagcaagattctgtctc-a-----aaaaataaaaat i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100374173 67 - 115148730 accacgccactgcattccagcctgggtgacagagcaagattctgtcttaaaaaataaaaataaaaat i nomLeu3.chr7b I 1 C 0 s rheMac3.chr10 80526762 60 + 95678458 cccacgccactgcattccagcctgggtgacagagcaagattctgtctcaa-----aaaaaaaaaa-- i rheMac3.chr10 C 0 C 0 s chlSab2.chr19 18475522 62 + 33263144 actgcgccactgcattccagcctgggtggcagagcaagattctgtccaaa-----aaaaaaaaaaaT i chlSab2.chr19 C 0 I 337 e canFam3.chr10 40813699 0 - 69331447 C e calJac3.chr1 198200869 0 + 210400635 C e panTro4.chr22 34407831 0 + 49737984 C e papAnu2.chr10 76208785 388 + 90941950 I e macFas5.chr10 80943019 11217 - 96509753 I a score=12196.000000 s hg38.chr22_KI270876v1_alt 29092 29 + 263666 aaataaaaaTCTGCGTTATCCCTCTGGGC s ponAbe2.chr22 30819355 29 + 46535552 aaataaaaaTCTGTGTTATCCCTCCGGCG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100374240 29 - 115148730 aaataaaaaTCTGTGTTAACCCTCCGGCG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80526822 29 + 95678458 aaaaaaaaaTCTGTGTTATCCCTCCTGTG i rheMac3.chr10 C 0 I 398 e canFam3.chr10 40813699 0 - 69331447 C e calJac3.chr1 198200869 0 + 210400635 C e panTro4.chr22 34407831 0 + 49737984 C e papAnu2.chr10 76208785 388 + 90941950 I e macFas5.chr10 80943019 11217 - 96509753 I e chlSab2.chr19 18475584 337 + 33263144 I a score=43809.000000 s hg38.chr22_KI270876v1_alt 29121 23 + 263666 CCTGCAACTCTTAATGGGTCCAG s ponAbe2.chr22 30819384 23 + 46535552 CCTGCAACTCTTAATGGGTCCAG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100374269 23 - 115148730 CCTGCAACTCTTAATGGGTCCAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80527249 23 + 95678458 CCTGCAACTCTTAATGGGTTCAG i rheMac3.chr10 I 398 C 0 s macFas5.chr10 80954236 23 - 96509753 CCTGCAACTCTTAATGGGTTCAG i macFas5.chr10 I 11217 C 0 s papAnu2.chr10 76209173 23 + 90941950 cCTGCAACTCTTAATGAGTTCAG i papAnu2.chr10 I 388 C 0 s chlSab2.chr19 18475921 23 + 33263144 CCTGCAACTCTTAATGGGTTCAG i chlSab2.chr19 I 337 C 0 e canFam3.chr10 40813699 0 - 69331447 C e calJac3.chr1 198200869 0 + 210400635 C e panTro4.chr22 34407831 0 + 49737984 C a score=535926.000000 s hg38.chr22_KI270876v1_alt 29144 292 + 263666 TTTTGTGGTCAGTCCAGGCACTGTTATCTGGTTGTGTGGTTGAGAATTCCAGAAGTGCCTAGATTTGTTTTTGGCCCAGCCATGCCTTCTCACTATGTGGCCCTCGAGGGAGATATTAGCATGAGGGACAATGGCAAACAGTAGTAGCAGAAAAGGACAATGCCTCGTTTTACCCTTCTGGCTTGGGGCTGACTCTCCAGAGCAGAGCTCTCTGGCAGAATGGACTGAACTACCTGGCTTAGGTCTACGTGAGCCTCTCCCTGCCTCTAAAACCAGACTCCAAGTTCAGGAT s ponAbe2.chr22 30819407 292 + 46535552 TTTTGTGGTCAGTCCAGGCACTATTATTTGGTTGTGTGGTCCAGAATTCCAGAAGTGCCTAGATTTGTTTTGGGCCCAGCCATGCCTTCTCACTACATGGCCCTCAAGGGAGATATTAGCATGAGGGACAATGGCAAACAGCAGTAGCAGAAAAGGACAATGCCTCGTTTTACCCTTCTGGCTTGGGGCTGACTCTCCAGAGCAGAGCTCTCTGGCAGAATGGACTGAACTACATGGCTTAGGTCTACATGAACCTCTCCCTGCCTCTAAAACCAGACTCCAAGTTCAGGAC i ponAbe2.chr22 C 0 I 391 s nomLeu3.chr7b 100374292 292 - 115148730 TTTTGTGGTCAGTCCAGGCACTGTCATCTGGTTGTGTGGTCGAGAATTCCAGAAGTGCCTAGATTTATTTTTGGCCCAGCCATGCCTTCTCACTACATGGCCCTAGAGGGAGATATTAGCATGAGGGACAATGGTAAACAGTATTAGCAGAAGAGCACAATGCCTCGTTTCAGCCTTCTGGCTTGGGGCTGACTCTCCAGAGCAGAGCTCTCTGGCAGAATGGACTGAAGTACATGGCTTAGGTCTTTGCGAGCCTCTCCCTGCCTCTAAAACCAAGCTCCAAGTTCAGGAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80527272 281 + 95678458 TTTTGTGGTCAGTCCAGGCACTGTTATCTGATTGTGTGGTCGAGAATTCC----------AGATTTGTTTTTGGCGCAGCCATGCCTTCTCACTACACGGCCCCCGAGGGACACGTTAGCATGAGGGACAATGGCAAACAGTAGCAGCAGAAAAGGACAATGCCTCATTTTA-CCTTCTGGCATGGGGCCGACTCTCCAGAGCAGAGCTCTCTGGCAGAATGGACTGAACTGCATGGCTTAGGTCTATACGAGCCTCTCCCTCTCTCTAAAACCAGACTCCAAGTTCAGGAC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80954259 281 - 96509753 TTTTGTGGTCAGTCCAGGCACTGTTATCTGATTGTGTGGTCGAGAATTCC----------AGATTTGTTTTTGGCCCAGCCATGCCTTCTCACTACACGGCCCCCGAGGGACACGTTAGCATGAGGGACAATGGCAAACAGTAGCAGCAGAAAAGGACAATGCCTCATTTTA-CCTTCTGGCATGGGGCCGACTCTCCAGAGCAGAGCTCTCTGGCAGAATGGACTGAACTGCATGGCTTAGGTCTATACGAGCCTCTCCCTCTCTCTAAAACCAGACTCCAAGTTCAGGAC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76209196 277 + 90941950 TTTTGTGGTCAGTCCAGGCACTGCTATCTGATTGTGTGGTCGAGAATTCC----------AGATTTGTTTTTGGCCCAGCCATGCCTTCTCACTACATGGCCCCCGAGGGACATATTAGCATGAGGGACAATGGCAAACAGTAGCAGCAGAAAAGGACAATGCCTCATTTTA-CCTTCTGGCATGGGGCTGACTCTCCAGATCGGAGGTCTCTGGCAGAATGGACTGAACTACATGGCTTAGGTCTATACGAGCCTCTCC----CTCTAAAACCAGACCCCAAGTTCAGGAC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18475944 291 + 33263144 TTTTGTGGTCAGTCCAGGCACTGCTGTCTGGTTGTGTGGTCGAGAATTCCAGAAGTGCCTAGATTTGTTTTTGGCCCAGCCGTGCCTTCTCACTACATGGCCCCCGAGGGACATATTAGCATGAGGGACAATGGTAAACAGTAGCAGCAGAAAAGGACAATGCCTCATTTTA-CCTTCTGGCATGTGGCTGACTCTCCAGCGCGGAGCTCTCTGGCAGAATGGACTGAACTACATGGCTTAGGTCTATACGAGCCTCTCCCTCTTTGTAAAACCAGACTCCAAGTTCAGGAC i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40813699 270 - 69331447 TTTTGTGGTGAGTTTGGAGGTCACC------TTGTGTGTTCAGGAA-CCCAGACATGCCTGCACTGGGCCTCAGTCCAGCCACACC-CATCAATCAGTGATCCTTGAAAGAGATATTAGCACAAGAGACCATGGCAA----------TGGGAAAGCAGAACAGCACCTGTCA-TTCTCTGGCTTGGGCTTGAATCTCCAGAGCAGAATTCTCTGGCAATGTAGATTTCATTATGTGGTTTA-ACCCAAGAGAGCCTCTC--TCCCTGTAAACTCAAACCCAGATCTCAGGAG i canFam3.chr10 C 0 C 0 e calJac3.chr1 198200869 0 + 210400635 C e panTro4.chr22 34407831 0 + 49737984 C a score=81475.000000 s hg38.chr22_KI270876v1_alt 29436 42 + 263666 CGCTGTGTCCTCCAGC-AATGAATGCAGGGTGTCCGACTGAGA s ponAbe2.chr22 30820090 42 + 46535552 CACTGTGTCCTCCAGC-GATGAACGCAGGGTGCCCGACTGAGA i ponAbe2.chr22 I 391 C 0 s nomLeu3.chr7b 100374584 42 - 115148730 CACTGTGTCCTCCAGC-GATGAATGCAGGGTGCCCGACTGAGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80527553 42 + 95678458 CACTCTGTCCTCCAGC-GATGAGTGCAGGGTGCCTGGCTGAGA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80954540 42 - 96509753 CACTCTGTCCTCCAGC-GATGAGTGCAGGGTGCCTGGTTGAGA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76209473 42 + 90941950 CACTCTGTCCTCCAGC-GATGAGTGCAGGGTGCCCGGCTGAGA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18476235 42 + 33263144 CACTCTGTCCTCCAGC-GATGAATGCAGGGTGCCCGGCTGAGA i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40813969 43 - 69331447 CACCCTGGCCTCTGGCTGGTGAATTGGAAGTGCCCAACCAATG i canFam3.chr10 C 0 C 0 e calJac3.chr1 198200869 0 + 210400635 C e panTro4.chr22 34407831 0 + 49737984 C a score=690439.000000 s hg38.chr22_KI270876v1_alt 29478 299 + 263666 AGAGTTG-AGAAAGCAAGATAAATGAACTGGGGCCAGTGGATCCCTTCTTCCGTGTTGAGAGAGGAGGCAGGAGAGAGGAGCAAGCTCCTTGCATCTGTGTGTGATCCCTGAGCACA-GTGGCCACAGCCTCCACTGAAGGTGGCCTCCTGG-----GTGTCTTGTAATGGAAACCACTCAGAAGAGTCTAACGCCCTGTTTGGGAGACGTGAGTCAAAGCAGGGGGAGAAGGGTAGTTCTTTCTCG-CTCTCAGTGTGATATTCTGAGCTTTCTCA-TGGAAGATGCATTTTTAAATTATCAGAAAT s panTro4.chr22 34407831 300 + 49737984 AGAGTTG-AGAAAGCAAGATAAATGAACTGGGGCCAGCGGATCCCTTCTTCCGTGTTGAGAGAGGAGGCAGGAGAGAGGAGCAAGCTCCTTGCATCTGTGTGTGATCCCTGAGCACA-GTGGCCACAGCCTCCACCGAAGGTGGCCTCCTGG-----GTGTCTTGTAATGGAAACCACTCAGAAGAGTCTAACGCCCTGTTTGGGAGACGTGAGTCAAAGCAGGGGGAGAAGGGTAGTTCTTTCTCG-CTCTCAGTGTGATATTCTGAGCTTTCTCAGTGGAAGATGCATTTTTAAATTATCAGAAAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30820132 287 + 46535552 AGAGGTG-AGAAAGCAAGATAAATGAACTGGGGCCAGCGGATCACTTCTTCCATGTT--------------GAGAGAGGAGCGAGCTCCTTGCATCTGTGTGTGATCCCTGAGCACA-GTGGCCACAGCCTCCACTAAAGGTGGCCTCCTGG-----GTGTCTTGTAATGGAAACCACTCAGAAGAGTCTAACGCCCTCTTTGGGAGACGTGGGGCAAAGCAGGGGGAGAAGGGTAGTTCTTTCTCGCCCCTCAGTGTGATATTCTGAGCTttctcagtggaagatgcatttttaaattatcagaaat i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100374626 299 - 115148730 AGAGGTG-AGAAAGCAAGATAAATGAACTGGGGCCAGCGGATCACGTCTTCCGTGTTGAGAGAGGAGGCAGGAGAGAGGAGCGAGCTCCTTGCATCTGTGTGTGATCTCTGAGCACA-GTGGCCACAGCCTTCACTAAAGGTGGCCCCCTGG-----GTGTCTTGTAATGGAAACCACTC--AAGAGTCTAACGCCCTCTTTGGGAGACGTGAGGCAAAGCAGGGGGAGAAGGGTAGTTCTTTCTCGCCCCTCAGTGTGATATTCTGAGCTTTCTCAGTGGAAGATGCATTTTTAAATTATCAGAAAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80527595 291 + 95678458 AGAGGTG-AGAAAGCAAGATAAATGAACTCAAAC---------------TCCATGTTAAGAGAGGAGGCAGGAGCGAGGAGCGGGCTCCTTGCATCTGTGTGTGATCGCTGAGCACA-GTGGCCACAGCGTCCACTCAAGGTGACCCCCTGGGACACGTGTCTTGTAATGAAAACCACTCAGAAGAGTCTAACGCCCTCTTTGGGAGATGTGAGGCAAAGCAGGGGGAGAAGGGCAGTTCTTTCTCACCCCTCAGTGTGATATTCTGAGCTttctcagtggaagacgcatttttaaattatcagaaat i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80954582 291 - 96509753 AGAGGTG-AGAAAGCAAGATAAATGAACTCAAAC---------------TCCATGTTAAGAGAGGAGGCAGGAGCGAGGAGCGGGCTCCTTGCATCTGTGTGTGATCGCTGAGCACA-GTGGCCACAGCGTCCACTCAAGGTGACCCCCTGGGACACGTGTCTTGTAATGAAAACCACTCAGAAGAGTCTAACGCCCTCTTTGGGAGATGTGAGGCAAAGCAGGGGGAGAAGGGCAGTTCTTTCTCACCCCTCAGTGTGATATTCTGAGCTTTCTCAGTGGAAGACGCATTTTTAAATTATCAGAAAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76209515 286 + 90941950 AGAGGTG-AGAAAGCAAGATAAATGAACTCAAAC---------------TCCATGTtgagagaggaggcaggagcGAGGAGCGCGCTTCTTGCATCTGTGTGTGATCCCTGAGCACA-GTGGCCACAGCCTCCACTAAAGGTGACCCCCTGG-----GTGTCTTGTAATGGAAACCAATGAGAAGAGTCCAACACCCTCTTTGGGAGATGTGAGGCAAAGCAGGGGGAGAAGGGCAGTTTTTTCTCACCCCTCGGTGTGATATTCTGAGCTTTCTCAGTGGAAGAcgcatttttaaattatcagaaAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18476277 285 + 33263144 AGAGGTG-AGAAAGCAAGATAAATGAACTCAAAC---------------TCCGTGTTGAGAGAGGAGGCAGGAGCGAGGAGCGGGCTCCTTGCATCTGTGTGTGATCCCTGAGCACA-GTGGCCACAGCCTCCACTAAAGGTGACCCCCTGG-----GTGTCTTGTAATGGAAACCACTCAGAAGAGTCTAACGCCCTCTTTGGGAGATGTGAGGCAAAGCAGGGGG-GAAGGGCAGTTCTTTCTCACCCCTCAGTGTGATATTCTGAGCTTTCTCAGTGGAAGATGCATTTTTAAATTATCAGAAAT i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40814012 253 - 69331447 AGAGAAGAAGGGGGCAACACGGATAGGCCAGTAC------ATCACTCTTGGGGGGTAGAGACAGGAAGCT-GAGAGA-GAGAGGGCT-CGTGCATTTGTGTGGGATCCTTGAATGGAGGTGGCCACAGCC----------GTGGCCCCTCA------GTGTTGGGGAATCTAAGTCAATCAGAGGAG------GCCCTCTTTGGGA----------------------GAAGAGTTGCTACTTCCTCCCAGGTAGTATGACATTCTGAGCTCTCCCGCAAGAAGGTACATTTCTAACT--ACAGAAAT i canFam3.chr10 C 0 I 199 e calJac3.chr1 198200869 0 + 210400635 C a score=2122.000000 s hg38.chr22_KI270876v1_alt 29777 2 + 263666 TG s panTro4.chr22 34408131 2 + 49737984 TG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30820419 2 + 46535552 tg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100374925 2 - 115148730 TG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80527886 2 + 95678458 gg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80954873 2 - 96509753 GG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76209801 2 + 90941950 GG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18476562 2 + 33263144 GG i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40814265 199 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C a score=827570.000000 s hg38.chr22_KI270876v1_alt 29779 327 + 263666 ATCGATTATGAAATATGATGATTCGTGAAACATCTGTGTACATAATCAAACACAAGATGATGTTGTTTGACCTCTCATCCT--ATGCATAAAGCACAAAAGTTGCATAGGAGATGAATTTAACTGGAAGGGAACTATGAGCCCATTTCATGGACAGACCCAGAACCTGTCCAGTGGTTCTCCCACTCCCGCTATATGATCATCCTCTGCCTTTGCTGGGTCTCAGCCCTGCTCACTCCCTTCTTGCCTCCTCCC-CAAAATAAAGTCTAATAGAGTCATCT-CCCAAGATCTATTCTAGCCCAGGACAGCAGGGAGAGCTGAGCAAGATTT s panTro4.chr22 34408133 327 + 49737984 ATCGATTATGAAATATGATGATTCGTGAAACATCTGTGTACATAATCAAACACAAGATGATGTTGTTTGACCTCTCATCCT--ATGCATAAAGCACAAAAGTTGCATAGGAGATGAATTTAACTGGAAGGGAACTATGAGCCCATTTCATGGACAGACCCGGAACCTGTCCAGTGGTTCTCCCACTCCCGCTATATGATCATCCTCTGCCTTTGCTGGGTCTCAGCCCTGCTCACTCCCTTCTTGCCTCCTCCC-CAAAATAAAGTCTAATAGAGTCATCT-CCCAAGATCTATTCTAGCCCAGGACAACAGGGAGAGCTGAGCAAGATTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30820421 327 + 46535552 atagattatgaaatatgatgattcgtgaaacagctgtgtacataatcaaacacaagttgatgatttttgacctctcatcct--atgtataaagcacaaaagttgcataggagatgaatttatctggaagggaactatgagcccatttcatggacagacccagaacctgtccagtggttctcccactcccactatatgatcatactctgcctttgctgggtctcagccctgCTCACTCCCTTCTTGCCTCCTCCC-CAAAGTAAAGTCTAATAGAGTCATCT-CCCAAGATCTATTCTAGCCCAGGACAGCAGGGAGGGCTGAGCAAAATTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100374927 327 - 115148730 ATAGATTATGAAATATGATGATTCGTGAAACAGCTGTGTACATAATCAAACACAAGTTGATGTTGTTTGACCTCTCATCCT--ATGTACAAAGCACAAAAGTTGCATAGGAGATGGATTTATCTGGAAGGGAACTATGAGCCCATTTCATGGACAGACCCAGAAACCGTCCAGTGGTTCTCCCACTCCCGCCATATGATCATTCTCTGCCTTTGCAGGGTCTCAGCTCTGCTCACTCCCTTCTTGCCTCCTCCC-CAAAATAAAGTCTAATAGAGTCATCT-CCCAAGATCTATTCTAGCCCAGGACAGCAGGGAGGGCTGAGTAAGATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80527888 327 + 95678458 atcgattatgaaatatgatggttcgtgaaatagctgtgtacataatcaagcacaagttggcgttgtttgacctctcatcct--atgtataaagcacaaaagttgcataggagatgattttaactggaaggaaactatgagcctgtttcatggacagacccagaacccgtccagtggttctcccactcccgctatttgatcatcctctgcctttgcTGGGTCTCAGGCCTGCTCACTCCCTTCTTGCCTCCTCCC-CAAAATAAAGTGTAATAGAGTCATCT-CCCAAGATCTATTCTAGCCTGGTACAGCAGGGAGGGCTGAGCAATATTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80954875 327 - 96509753 ATCGATTATGAAATATGATGGTTCGTGAAATAGCTGTGTACATAATCAAGCACAAGTTGGCGTTGTTTGACCTCTCATCCT--ATGTATAAAGCACAAAAGTTGCATAGGAGATGATTTTAACTGGAAGGAAACTATGAGCCCGTTTCATGGACAGACCCAGAACCCGTCCAGTGGTTCTCCCACTCCCGCTATTTGATCATCCTCTGCCTTTGCTGGGTCTCAGGCCTGCTCACTCCCTTCTTGCCTCCTCCC-CAAAATAAAGTGTAATAGAGTCATCT-CCCAAGATCTATTCTAGCCTGGTACAGCAGGGAGGGCTGAGCAATATTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76209803 327 + 90941950 ATCGATTATGAAATATGATGGTTCACGAAACAGCTGTGTACATAATCAAACACAAGTTGACGTTGTTTGACCTCTCTTCCT--ATGTATAAAGCACAAAAGTTGCATACGAGATGATTTTAACTGGAAGGAAACTATGAGCCCGTTTCATGGACAGACCCAGAACCTGTCCAGTGGTTCTCCCACTCCCGCTATTTGATCATCCTCTGCCTTTGCTGGgtctcagccctgctcactccCTTCTTGCCTCCTCCC-CAAAATAAAGTGTAATAGAGTCATCT-CCCAAGATCTATTCTAGCCCGGTACAGCAGGGAGGGCTGagcaatattt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18476564 327 + 33263144 ATCGATTATGAAATATGATGGTTCGTGAAATAGCTGTGTACATAATCAAGCACAAGTTGGCGTTGTTTGACCTCTCATCCT--ATGTATAAAGCACAAAAGTTGCATAGGAGATGATTTTAACTGGAAGGAAACTATGAGCCCGTTTCATGGACAGACCCAGAACCCGTCCAGTGGTTCTCCCACTCCCGCTATTTGATCATCCTCTGCCTTTGCTGGGTCTCAGGCCTGCTCACTCCCTTCTTGCCTCCTCCC-CAAAATAAAGTGTAATAGAGTCATCT-CCCAAGATCTATTCTAGCCTGGTACAGCAGGGAGGGCTGAGCAATATTT i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40814464 234 - 69331447 ATGGAATATAGAATATGATGATTAATGAGAC------------------------------------TTACCTCTAATCCTAAAGGCATAAATCAC-AAAGTCTCAGAGATGCTTACTAAAACTGGAAAGA---CATGGGCCCATCTCAAGG--AGACCCAGCAC-----------------------------------------------TACCGGGCCTTGGTCCTGTTCACTCCC-TCTCACTTTCTCCCACAAAACGAGGT------AACTCATTTCCCCAAGAGCTATTTTAGGCCAGAACTGGGAAGATAG-TCAGCAACAGTT i canFam3.chr10 I 199 I 374 e calJac3.chr1 198200869 0 + 210400635 C a score=799135.000000 s hg38.chr22_KI270876v1_alt 30106 336 + 263666 TAAACATAAAAAACTTAGTGTCAgctgggcgtagtggctcaggactttaatcccagcactttgagaggctgaggtggccagatggatcacctgaggcccaggaggttgacagcctggtcaacatggtgaaaccccgtctctactaagaatgcaaaaattagctgggcgtggtggtgcacacctataatcccagctactcgggagactgaggcaggagaatcgcttgaacaagggaggcagaggttgcaaagccgagatcgtgccactgcactccagcctgagccacagagcaagactgtgtatcaaaaaTtaaataaatatatacatacatacata s panTro4.chr22 34408460 336 + 49737984 TAAACATAAAAAACTTAATGTCAgctgggcgtagtggctcaggactttaatcccagcactttgcgaggctgaggtggccagatggatcacctgaggcccaggaggtcgacagcctggtcaacatggcgaaaccccgtctctactaagaatacaaaaattagctgggcatggtggtgcacacctataatcccagctactcgggagactgaggcaggagaatcgcttgaacaagggaggcagaggttgcaaagccgagatcgtgccactgcactccagcctgagccacagagcaagactgtgtatcaaaaaTTAAATAAATATATACATACATACATA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30820748 335 + 46535552 TAAACATAAAAAACTTAGTGTCagctgggtgtagtggttcaggactttaattccagcactttgggaggctgaggtggccggatggatcacctgagg-ccaggaggtcgacagcctggtcaacatggtgaaaccccgtctctactaagaatacaaaaattagctgggcatggtggtgcacacctgtaatcccagctactcgggaggctgagccaggagaatggcatgaacaagggaggcagaggttgcaaagccaagatcgtgccactgcactccaacctgagccacagagcaagaccgtgtaccaaaaaTTAAATAAATTCATACATACGTACATA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100375254 336 - 115148730 TAAACATAAAAAACTTAGTGTCAgctgggcgtagtggctcaggactttaatcccagcactttgcgaggctgaggtggccagatggatcacctgaggcccaggaagtcgacagcctggtcaacatggtgaaaccccgtctctactaagaatacaaaaattagctgggcatggtggtgcacacctataatcccagctactcgggaggctgaggcaggagaatcgcttgaaccagggaggcagaggttgcaaagccgagatcgtgccactgcactccagcctgagccacagaggaagactgtgtatcaaaaaTTAAATAAATATACACATACATACATA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80528215 335 + 95678458 TAAACATAAAAAACTTAGTGTCAgctgggctcactggctcagaactttaatcccagcactttgggaggctgaagtggcgggatggatcacctgagg-caaggaggtcgacagcctggtcagcgtggtgaaaccccgtctctattaagaatacaaaaattaactgggcatggtggtgcacacccataatcccagctactcgggaggctgagtcaggagaatcgcttgaaccagggaggcagaggttgcaaagctgagatcatgccactgcactccagcctgggccgcagagcaagactgtgtatcaaaaaTTAAatacatacacacatacatacata i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80955202 335 - 96509753 TAAACATAAAAAACTTAGTGTCAgctgggctcactggctcagaactttaatcccagcactttgggaggctgaagtggccggatggatcacctgagg-ccaggaggtcgacagcctggtcaacgtggtgaaaccccgtctctattaagaatacaaaaattaactgggcatggtggtgcacacccataatcccagctactcgggaggctgagtcaggagaatcgcttgaaccaggaaggcagaggttgcaaagctgagatcatgccactgcactccagcctgggccgcagagcaagactgtgtatcaaaaaTtaaatacatacacacatacatacata i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76210130 323 + 90941950 taaacataaaaaacttAGTgtcagctgggctcagtggctcaggactttaatcccagcactttgggaggctgaagtggccggatggatcacctgagg-ccaggaggtcgacagcctggtcaacatggtgaaaccccgtctctattaagaatacaaaaattaactgggcatggtggtgcacacccataatcccagctactcaggaggctgaggcaggagaatcgcttgaaccagggaggcagaggttgcaaagctgagatcatgccactgtactccagcctgggccgcagagcaagactgtatatcaaaaattaaatacatacata------------ i papAnu2.chr10 C 0 I 320 s chlSab2.chr19 18476891 335 + 33263144 TAAACATAAAAAACTTAGTGTCAgctgggcacagtggctcaggactttaatcccagcactttgggaggctgaagtggctggatggatcacctgagg-ccaggaggtcgacagcctggtcaacgtggtgaaaccccgtctctattaagaatacaaaaattaactgggcatggtggtgcacacccataatcccagctactcgggaggctgagtcaggagaatcgcttgaaccagggaggcagaggttgcaaagctgagatcatgccactgcactccagcctgggccacagagcaagactgtgtatcaaaaaTtaaatacatacacacatacatacata i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40814698 374 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C a score=2032946.000000 s hg38.chr22_KI270876v1_alt 30442 885 + 263666 AAAAAACAAAACTTAGTGTCATGAATGATGAGGTCTTATTCTAAGTGTTGTTCTGTATCTGTCATTTACTGGGTATACACAGAGTAGGCAGGAAAGCGCAGATAACACACATCTCTGCCTTCAAGGTGAAGCTCCGGGCTGCCACAATAAACCACTCACTGCATCAGCTGAAACCTCTGCACTGTACCTATCTATGTAGAGCATAGGAAGAGAGCAAAGAAATAAAAAGCAGAATGCCtaaaataatgggacaaatcaaagttgaataattataacaaaaaataattaatatgaatatgaataacattaag-aaaagtatcaaattgggtcaaaatcagatctgagtaattttctacatccaagagataacctgaaataaataggacacaaaaggccaaaataacaagttagaaaaacttacatagaaccaacaaaaaaagaaaacaaTATTAACATTTAACAGTATTAATTTGTCAGA----TTTTGTCTTACCATGTACTTGGCAGCATTCCCTGCACCAAATGCATTACTGTACAAGTGGGAGATTTT---ATGATAAAATAATGAATAATAAATCTCATTACTAAAATC-TTTTTATTCTATTGGCtttttgttgttgttgagacagagtctcgctctgtcacccaggctgaagtgcagtggtgcaatctcagctcactgcaacctccgcctcccgggttcaagagattctcctgcctcagcctcctgagtagctgggattacaggtgcccaccaccacgcctggctaatttttgtatttttagtagaga-----------cttgttggccaggctggtctcgaactcctgatctcaggtgatccacctgcctcagcttcccaaagtgctgggattacaggcgtgagccaccgtgcctggc s panTro4.chr22 34408796 885 + 49737984 AAAAAACAAAACTTAGTGTCATGAATGATGAGGTCTTATTCTAAGTGTTGTTCTGTATCTGTCATTTACTGGGTATACACAGAGTAGGCAGGAAAGCACAGATAAGACACATCTCTGCCTTCAAGGTGAAACTCCGGGCTGCCACAATAAACCACTCACTGCATCAGCTGAAACCTCTGCACTGTACCTATCTATGTAGAGCATAGGAAGAGAGCAAAGAAATAAAAAGCAGAATGCCtaaaataatgggacaaatcaaagttgaataattataacaaaaaataattaatatgaatatgaataacattaag-aaaagtatcaaattgggtcaaaatcagatctgagtaattttctacatccaagagataatctgaaataaataggacacaaaaggccaaaataacaagttagaaaaacttacatagaaccaacaaaaaaagaaaacaaTATTAACATTTAACAGTATTAATTTGTCAGA----CTTTGTCTTACCATGTACTTGGCAGCATTCCCTGCACCAAATGCATTACTGTACAAGTGGGAGATTTT---ATGATAAAATAATGAATAATAAATCTCATTACTAAAATC-TTTTTATTCTATTGGCtttttgttgttgttgagacagagtctcgctctgtcacccaggctgaagtgcagtggtgcaatctcagctcactgcaacctccgcctcccgggttcaagagattctcctgcctcagcctcctgagtagctgggattacaggtgcccgccagcacgcctggctaatttttgtatttttagtagaga-----------cttgttggccaggctggtctcgaactcctgacctcaggtgatccacctgcctcagcttcccaaagtgctgggattacaggcgtgagccaccgtgcctggc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30821083 897 + 46535552 AAAAAACAAAACTTAGTGTCATGAACGATGAGGTCTTATTCTAAGTGTTGTTCTGTATCTGTCATTTACTGGGTATACACAGAGTAGGCAGGAAAGCACAGATAAGACACATCTCTACCTTGAAAGTGAAGCTCCTGGCTACCACAATAAACCACTCACTGCATCAGCTGAAACTTCTGCACTGTACCTATCTATGTAGAGCATAGGAAGAGAACAAAGAAATAAAAAGCAGAATGCCGAAAATAATGCAACAAATCAAAGTTGAACAATTATAACAAAAAATAATTAATATGAATATGAATAACATTAAG-AAAAGTATCAAATTGGGTCAAAATCAGATTTGAGTAATTTTCTACATCCAAGAGATAGCCTGAAATAAATAGGACACAAAAGGCCAAAATAGCAAGTTAGAAAAACTT--ATAGAACCAACAAAAAAAGAAAACGATATTAATATTTAACAGTATTAATTTGTCAGA----CTTTGTCTTACCATGTACTTGGCAGCATTCCCTGCACCAAATGCATTACTGTACAAGCTGGAGATTTTATAATGATAAAATAATGAATAATAAATCTCATTACTGAAATC-TTTTTATTCTATTGGCTTTTAGTTGTTGttgagatggagtcttgctctgtcgcccaggctggagtgcagtggtgcaatctcagctcactgcaaactccacctcccgagttcaagagattctcctgcctcagcctcccgagtagctgggattacaggtgcccgccaccacacccggctaatttttgtatttttaatagagacagggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacctgcctcagcctcccaaagtgctgggattacaggcgtgagccaccatgcctggc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100375590 882 - 115148730 AAAAAACAAAACTTAGTGTCATGAACGATAAGGTCTTATTCTAAATGTTGTTCTGTATCTGTCATTTATTGGGTATACACAGAGTAGGCAGGAAAGCATAGATAAGACACATCTCTACCTTCAAGGTGAAGCTCCGGGCTGCCACAATAAACCACTGACTGCATCAGCTGAAACCTCTGCACTGTACCTATCTATGTAGAGCATAGGAAGAGAGCAAAGAAATAAAAAGCAGAATGCCtaaaataatgcgacaaatcaaagttgaacaattataacaaaaaataattaatatgaatgtgaacaacattaagaaaaagaatcaaattgggtcaaaatcagatttgagtaattttctacatccaagagatagcctgaaataaataggacacaaaaggccaaaataacaagttagaaaaacttacatagaaccaacaaaaaaagaaaacaatattaatatTTAACAGTATTAATTTGTCAGA----CTTTGTCTTACCATGTACTTGGCAGCATTCCCTGTACCAAATGCATTACTGTACAAGCTGGAGATTTTATAATGAGAAAATAATGAATAATAAATCTCATTACTAAAATC-TTTTTATTCTATTGGCtttttgttgttgttgagacagagtctcactctgttgcccaggctggagtgcagtggtgcaatatcagctcactgcaacctccgcctcccgggttcaagagattctcctgcctcagcctcctgagtagctgggattacaggtgtgcaccaccacgcccagctactttttatatttttagtagagacagggtttcaccatgttggccaggcttgtctagaactcccgaccacaggtgatctacctgcctcagcctcccaaagtgctgggattacaggcg------------------ i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80528550 886 + 95678458 AGGAAACAAAACTTAGTGTCATGAACAATGAAGTCTTATTCTAAGTGTTGTTCAGTATCTGCCATTTACTGGTCATACACAGAATAGGCAGGAAAGCACAGATAAGACACATCTCTACCTTCAAGGTGAAGCTCCGGGCTGCCACAATAAACCACTCGCTGCATCAGCTGAAACCTCTGCACCGTACCTATCTATGTAGAGCATA-GAGGAGAGCAAAGAAATACAAAGCAGAATGCCTAAAATAATGCGACAAATCAAAGTTGAACAATTATAACAGAA---AATTAATATGAATATGAATAACATGAAG-AAGA----------GTATCAAAATCAGATTTGAGTAATTTT-TACATCTAAGAGATAGCCTGAAATAAATAGGACACAAAAGGCCAAAATAACAAGTTAGAAAAACTTACACAGAACAAACAAACAAAGAAGACAATATGAATATTTAATAGTAGGAATTTGTCAGACTTTCTTTGTCTTACCATGTGCTTGGCAGCATTCCCAGCACCCCATGCATTACTGTACAAGCTGGAGATTTTATAATGATAAAA-AATGAATAATAAATCTCATTATTAAACTCttttttattctgttggctttt-gttgttgttgaggcggagtctcgctctgtcacccagcctggagtgcagtggtgcaatctcagctcactgcaacctccacctcctgggttcaagagattctcctgcctcagcctcccgagtagctgggactacaggtgccc-ccaccatgcccggctaatttttgtatttttagtggagacagcgtttcaccgtgttggccaggctggtctcaaactcctgacctcaggtgatctgcctgcctcagcctcccaaagtgctgggattacaggcgtgagccaccatgcctggc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80955537 886 - 96509753 AGGAAACAAAACTTAGTGTCATGAACAATGAAGTCTTATTCTAAGTGTTGTTCAGTATCTGCCATTTACTGGTCATACACAGAATAGGCAGGAAAGCACAGATAAGACACATCTCTACCTTCAAGGTGAAGCTCCGGGCTGCCACAATAAACCACTCGCTGCATCAGCTGAAACCTCTGCACCGTACCTATCTATGTAGAGCATA-GAGGAGAGCAAAGAAATACAAAGCAGAATGCCTAAAATAATGCGACAAATCAAAGTTGAACAATTATAACAgaa---aattaatatgaatatgaataacatgaag-aaga----------gtatcaaaatcagatttgagtaATTTTCTACATCTAAGAGATAGCCTGAAATAAATAGGACACAAAAGGCCAAAATAACAAGTTAGAAAAACTTACacagaacaaacaaacaaagaagacaaTATGAATATTTAATAGTAGGAATTTGTCAGACTTTCTTTGTCTTACCATGTGCTTGGCAGCATTCCCAGCACCCCATGCATTACTGTACAAGCTGGAGATTTTATAATGATAAAA-AATGAATAATAAATCTCATTATTAAACTC-TTTTTATTCTGTTGGCtttt-gttgttgttgaggcggagtctcgctctgtcacccagcctggagtgcagtggtgcaatctcagctcactgcaacctccacctcctgggttcaagagattctcctgcctcagcctcccgagtagctgggactacaggtgccc-ccaccatgcccggctaatttttgtatttttagtggagacagcgtttcaccgtgttggccaggctggtctcaaactcctgacctcaggtgatctgcctgcctcagcctcccaaagtgctgggattacaggcgtgagccaccatgcctggc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76210773 897 + 90941950 aaaaaacaaaacttagtgTCATGAACAATGAAGTCTTATTCTAAGTGTTGTTCAGTATCTGCCATTTACTGGTCATACACAGAATAGGCAGGAAAGCACAGATAAGACACATCTCTACCTTCAAGGTGAAGCTCCGGGCTGCCACAATAAACCACTCGCTGCatcagctgaaacctctgcaccGTACCTATCTATGTAGAGCATAGGAAGAGAGCAAAGAAATACAAAGCAGAATGCCTAAAATAATGCGACAAATCAAAGTTGAACaattataacagaaaataattaatatgaatatgaataaCATGAAG-AGTA---TCAAATTGGGTCAAAATCAGATTTGAGTAATTTTCTACATCTAAGAGATAGCCTGAAATAAATAGGacacaaaaggccaaaataacaagttagaaaaacttacacagaacaaacaaacaaagaagacaaTATGAATATTTAATAGTATGAATTTGTCAGACTTTCTTTGTCTTACCATGTGCTTGGCAGCATTCCCAGCACCCCATGCATTACTGTACAAGCTGGagattttataatgataaaa-aatgaataataaatctcattattaaactc-tttttattctattggctttt-gttgttgttgagacggagtcttgctctgtcacccagcctggagtgcagtggtgcaatctcagctcacttcaacttccacctcctgggttcaagagattctcctgcctcagcctcccgagtagctgggactacaggtgccc-ccaccatgcccggctaatttttgtatttttagtagagacagcgtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatctgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccatgcctggc i papAnu2.chr10 I 320 C 0 s chlSab2.chr19 18477226 893 + 33263144 AGAAAACAAAACTTAGTGTCATGAACAATGAAGTCTTATTCTAAGTGTTGCTCAGTATCTGCCATTTACTGATCATACACAGAATAGGCAGGAAAGCACAGATAAGACACATCTCTACCTTCAAGGTGAAGCTCCGGGCTGCCTCAATAAACCACTCGCTGCATCAGCTGAAACCTCTGCACCGTACCTATCTATGTAGAGCATAGGAAGAGAGCAAAGAAATACAAAGCAGAACGCCTAAAATAATGCGACAAATCAAAGTTGAACAATTATAACAgaa---aattaatatgaatatgaaaaacatgaag-aagagtatcaaATTGGGTCAAAATCAGATTTGAGTAGTTTTCTACATCTAAGAGATAGCCTGAAATAAATAGGACACAAAAGGCCAAAATAACAAGTTAGAAAAACTTACACAG----AACAAACAAAGAAGACAATATGAATATTTAATAGTATGAATTTGTCAGACTTTCTTTGTCTTACCATGTGCTTGGCAGCATTCCCAGCACCCCATGCATTACTGTACAAGCTGGAGATTTTATAATGATAAAA-AATGAATAATAAATCTCATTATTAAACTC-TTTTTATTCTATTGGCtttt-gttgttgtggaggcggagtctcgctctgtcacccagcctggagtgcagtggtgcaatctcagctcactgcaacctctacctcctgggttcaagagattctcctgcctcagcctcccgagtagctgggactacaggtgccc-ccaccatgcccggctaatttttgtatttttagtagagacagcgtttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatctgcctgcctcagcctcccaaagtgctgggattacaggcgtgagccaccatgcctggc i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40814698 374 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C a score=1127307.000000 s hg38.chr22_KI270876v1_alt 31327 435 + 263666 TTCTATTGGCTTTTATTATAAAACTAACAAGTTACTTTGGTAACAAAGCTCAATAATATAGATGAGTGAAAAGTGCAA----AAGTATTTTGTCACCCTAGCCCTAAATCTCCCTCCCTGA-GCTAAGCCTGTTCACATT-TGGTGTATCTCCTTCGAGAATATTCCCCTACTCCTACATCACATATATAGTAC-TT-AAAAAAAATAAGAAAAGAATATAAAGAacatattcttcaacctctt---------ttcttttacttaatatatcctggacctctttctaggtcagttgtacatagatttgcctcgttccttttcacatccataaacctttattttgtattgctctattttcatgtaaa---cagtccccggcatggatttttcaaattgtttccattt-ctttatacaacttcaaataactggatgaacatccatacacgtttgtctg s panTro4.chr22 34409681 435 + 49737984 TTCTATTGGCTTTTATTGTAAAACTAACAAGTTACTTTGGTAACAAAGCTCAATAATATAGATGAGTGAAAAGTGCAA----AAGTATTTtgtcaccccagccctaaatctccctccctga-gctaagcctgttcacatt-tggtgtatctccttcgagaatattcccctactcctacatcacatatatagtac-tt-aaaaaaaataagaaaagactataaagaacatattcttcaacctctt---------ttcttttacttaatatatcctggaactctttctaggtcagttgtacatagatttgcctcgttccttttcacatccataaacctttattttgtattgctctattttcatgtaaa---cagtccccggcatggatttttcaaattgttaccattt-ctttatacaacttcaaataactggatgaacatccgtacacgtttgtctg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30821980 434 + 46535552 tTCTATTGGCTTTTATTATAAAACTAACATGTTACTTTGGTAATAAAGCTCAATAATATAGACGAGTGAAAAGTGCAA----AAGTATTTTGTCACCCCAGCCCTAaatctccctcccaga-gctaagcctgttcacatt-tggtgtatctccttcgagaatattcccctactcctacat--catatatagtacttt-aaaaaaaataagaaaagaatataaagaacatattcttcaacctctt---------ttcttttacttaatatatcctggacctctttctaggtcagttttacatagatttgcctcattccttttcacatccataagcctttattttgtattgctctattttcgtgtaaa---cagtccccgacatggatttttcaaattgtttccattt-ctttatacaacttcaaataactggatgaatatccgtacatgtttgtctg i ponAbe2.chr22 C 0 I 6 s nomLeu3.chr7b 100376472 432 - 115148730 ---tATTGGCTTTTATTATAAAACTAACATGTTACTTTGGTAACAAAGCTCAATAATATAGATGAGTGAAAAGTGCAA----AAGTATTTTATCACCGCAGCCCTAAATCTCCCTCCTTGA-GCTAAGCCTGTTCATGTT-TGGTGTATCTCCTTCGAGAATATTCCCCTACTCCTACATCACATATATAGTAC-TT-AAAAAAAATAAGAAAAGAATATAAAGAacatattcttcaacctctt---------ttgttttacttaatatatcctggacctctttctaggtcagttttacatagatttgcctcgttccttttcacatccataagcctttattttgtattgctctattttcatgtaaa---cagtccccaacatggatttttcaaattgtttccactt-ctttatacaacttcaaataactggatgaaaatccatacatgtttgtctg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80529436 432 + 95678458 TTCTATTGGCTTTTATTATAAAACTAACATGTTACTTTGGTAACAAAGCTCAATAACATAGATGAGTGAAAAGTGCAA----AAGTATTTTGTCACCCCAGCCCTAAATCTCACTCC------CTAAGCCTGTTCACATT-TGGTGTATCTCCTTCGAGAATATTCCCCTACTCCTACATCACATATATAGTACTTT-AAAAAAAATGAGAAAAGAATATAAAGAACAttttcttcaacctatt---------ttattttgcttaatatatcctagacctctttctaggtcagttttacatagatttgcctcgttccttttcacatccataagcctttattttgtattgctctattttcatgtaaa---cagtcccagacatggatttttcaaattgtttccatttcctttatacaacttcaaataactggatgaacatctgtacacatttgtctg i rheMac3.chr10 C 0 I 6 s macFas5.chr10 80956423 432 - 96509753 TTCTATTGGCTTTTATTATAAAACTAACATGTTACTTTGGTAACAAAGCTCAATAACATAGATGAGTGAAAAGTGCAA----AAGTATTTTGTCACCCCAGCCCTAAATCTCACTCC------CTAAGCCTGTTCACATT-TGGTGTATCTCCTTCGAGAATATTCCCCTACTCCTACATCACATATATAGTACTTT-AAAAAAAATGAGAAAAGAATATAAAGAACAttttcttcaacctatt---------ttattttgcttaatatatcctagacctctttctaggtcagttttacatagatttgcctcgttccttttcacatccataagcctttattttgtattgctctattttcatgtaaa---cagtcccagacatggatttttcaaattgtttccatttcctttatacaacttcaaataactggatgaacatctgtacacatttgtctg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76211670 430 + 90941950 ttctatTGGCTTTTATTATAAAACTAACATGTTACTTTGGTAACAAAGCTCAATAAC--AGATGAGCGAAAAATGCAA----AAGTATTTTGTCACCCCAGCCCTAAATCTCACTCC------CTAAGCCTGTTCACGTT-TGGTGTATCTCCTTCGAGAATATTCCCCTACTCCTACATCACATAtatagtacttt-aaaaaaaatgagaaaagaatataaagaacattttcttcaacctctt---------ttcttttgcttaataTATCCTAGACCTCTTTCTAGGTCAGTTTTACATAGATTTGCCTCGTTCCTTTTCACATCCATAAGCCTTTATTTTGTATTGCTCTATTTTCATGTAAA---CAGTCCCAGACATGgatttttcaaattgtttccaTTTCCTTTATACAACTTCAAATAACTGGATGAACATCCGTACACGTTTGTCTG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18478119 433 + 33263144 TTCTATTGGCTTTTATTATAAAACTAACATGTTACTTTGGTAACAAAGCTCAATAACATAGATGAGTGAAAAGTGCAA----AAGTATTTTGTCACCCCAGCCCTAAATCTCACTCC------CTAAGCCTGTTCACATT-TGGTGTATCTCCTTCGAGAATATTCCCCTACTCCTACATCGCATATACAGTACTTTAAAAAAAAATGAGAAAAGAATTTAAAGAACAttttcttcaacctatt---------ttcttttgcttaatatatcctagacctctttctaggtcagttttacatagatttgcctcgttccttttcacatccataagcctttattttgtattgctctattttcatgtaaa---cagtcccagacatggatttttcaaattgtttccatttcctttatacaacttcaaataactggatgaacatccgtacacgtttgtctg i chlSab2.chr19 C 0 I 6 s canFam3.chr10 40815072 431 - 69331447 TTTTACTGGTTTTCATTGTGAATGGAGCTCATGGTTTCTGTAACAAA--TCAGTAAAACGGATGATTGAAAAGTACAGGTGTAGGTCTTCCCTCCCCCCAA-CCTCAGCCTCTCTCCCCGAGGCTAAGCCGGCTCACCCCGGGGTATACCTCCTCCCAGAATTTTCCCCTAGTCCTAGACCAcgtata-attttttt-gaaaa----------------tggagatcatgttctatgactttttatttatttatttttttacataacaaatcctgtgtctctttccaggtcagtt-cgcataga-ttgctttgctctttttcctgtctgtaagtctttcttttataccagtgtgttttaatgtaaacaccaataccctacatgg-tatttcagactgtttccattt-ctcttgatcacctcaaggaactggtgaaggccttacacacgcttctctg i canFam3.chr10 I 374 C 0 e calJac3.chr1 198200869 0 + 210400635 C a score=-114.000000 s hg38.chr22_KI270876v1_alt 31762 1 + 263666 t s panTro4.chr22 34410116 1 + 49737984 g i panTro4.chr22 C 0 I 5 e canFam3.chr10 40815503 0 - 69331447 C e calJac3.chr1 198200869 0 + 210400635 C e ponAbe2.chr22 30822414 6 + 46535552 I e rheMac3.chr10 80529868 6 + 95678458 I e papAnu2.chr10 76212100 0 + 90941950 C e macFas5.chr10 80956855 0 - 96509753 C e chlSab2.chr19 18478552 6 + 33263144 I e nomLeu3.chr7b 100376904 0 - 115148730 C a score=-4409.000000 s hg38.chr22_KI270876v1_alt 31763 12 + 263666 tgtgttgtgttg- s nomLeu3.chr7b 100376904 6 - 115148730 tgt------tcc- i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 80956855 6 - 96509753 -----tgtacc-- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76212100 6 + 90941950 -----TGTACC-- i papAnu2.chr10 C 0 C 0 s canFam3.chr10 40815503 8 - 69331447 -----tgtacaga i canFam3.chr10 C 0 C 0 e calJac3.chr1 198200869 0 + 210400635 C e ponAbe2.chr22 30822414 6 + 46535552 I e rheMac3.chr10 80529868 6 + 95678458 I e panTro4.chr22 34410117 5 + 49737984 I e chlSab2.chr19 18478552 6 + 33263144 I a score=78057.000000 s hg38.chr22_KI270876v1_alt 31775 35 + 263666 tgccgttgtgttgtgtccgtggtgggtgtatttct s panTro4.chr22 34410122 35 + 49737984 tgccgttgtgttgtgtccgtggtgggtgtatttct i panTro4.chr22 I 5 C 0 s ponAbe2.chr22 30822420 35 + 46535552 tgccattgtgttgtgtccgtggtgggtgtatttct i ponAbe2.chr22 I 6 C 0 s nomLeu3.chr7b 100376910 35 - 115148730 tgccattgtgttgtgtccgtgatgggtgtatttct i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80529874 35 + 95678458 tgctgttgtgttgtgtctgtggcgggtgagtttct i rheMac3.chr10 I 6 C 0 s macFas5.chr10 80956861 35 - 96509753 tgctgttgtgttgtgtctgtggcgggtgagtttct i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76212106 35 + 90941950 TGCCGTTGTGTTGTGTCTGTGGtgggtgaatttct i papAnu2.chr10 C 0 I 1200 s chlSab2.chr19 18478558 35 + 33263144 tgctgttgtgttgtgtctgtggtgggtgaatttct i chlSab2.chr19 I 6 C 0 s canFam3.chr10 40815511 15 - 69331447 agccattgtgtt-tgt------------------- i canFam3.chr10 C 0 C 0 e calJac3.chr1 198200869 0 + 210400635 C a score=127028.000000 s hg38.chr22_KI270876v1_alt 31810 64 + 263666 agaggtgggatgctgagtgtcaggcacatgtacttctcatgttaagagacatCCCAAGAAggcc s panTro4.chr22 34410157 64 + 49737984 agaggtgggatgctgagtgtcaggcacatgtacttctcatgttaagagacatCCCAAGAAggcc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30822455 64 + 46535552 agaggtgggatgctgagtgtcaggcacatgtacttctcatgttaacagacatCCCAAGAAggcc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100376945 64 - 115148730 agaggtgggatgctgagtgtcaggcacatgtaattctCATGTTAAGAGACATCCCAAGAAggcc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80529909 64 + 95678458 agaggtgggatgctgagtgtcaggcatgtgtacttctcatgttaagagacaCCCTGAGAAggcc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80956896 64 - 96509753 agaggtgggatgctgagtgtcaggcatgtgtacttctcatgttaagagacaCCCTGAGAAggcc i macFas5.chr10 C 0 C 0 s chlSab2.chr19 18478593 64 + 33263144 agaggtgagatgctgagggtcaggcatgtgtacttctCGTGTTAAGAGACACCCTGAGAAggcc i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40815526 56 - 69331447 ----gtgggatg-tgagcttca-gcatatgcact--tcatgttttgagatactccaaatcagcc i canFam3.chr10 C 0 I 814 e calJac3.chr1 198200869 0 + 210400635 C e papAnu2.chr10 76212141 1200 + 90941950 I a score=550204.000000 s hg38.chr22_KI270876v1_alt 31874 351 + 263666 aggtgcagtggctcacacctgtaatcctagcactttgggaggccaaggagggtggattgtttgagctcaggagttagagattagcctgggcaacatggtgaatctccatctctacaaaaaaaaaaaaaa------------------------------tatatatatatatatatattagctgggtgtggtggtgcacacctgtagtccccgccacttggggggctaagacaggaggatcacttgagcccgggaggttactgcagtgagccgagattgtgtcactgcactccagcccaggtgccaaaatgagaccatctccaaatgaaagaaaaaaaaaaaa-gaaaGATACCCTAAATCATCCTTCCAAAAGCCATAGCA s panTro4.chr22 34410221 380 + 49737984 aggtgcagtggctcacacctgtaatcctagcactttgggaggtgaaggagggtggattgtttgagctcaggagttagagatcagcctgggcaacatggcgaatctccatctctacaaaaaaaaaaaaaaaaaatatatatatatatatatatatatatatatatatatatatatatattagctgggtgtggtggtgcacacctgtagtccccgccacttggggggct--gacaggaggatcacttgagcccgggaggttactgcagtgagccgagattgtgtcactgccctccagcctaggtgccaaaatgagaccatctccaaaagaaagaaaaaaaaaaaaagaaaGATACCCTAAATCATCCTTCCAAAAGCTATAGCA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30822519 333 + 46535552 aggtgcagtggctcacgcctgtaatcctagcactttgggaggccaaggagggtggattgtttgagctcaggagttagagatcagcctgggcaacatgggaaatctctatctctacaaaa----------------------------------------tatgtatatatata-----tagctgggtgtggtggtgcacacctgtagtcccagccacttggggggctaagacatgaggatcacttgagcctgggaggttactgcagtgagccgagattgtgtcactgcactctagcctaggtgccaaaatgagaccatctccaaaagaaaaaaaaaaaaa----gaaaGATACCCTAAATCATCCTTCCAAAAGCCATAGCa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100377009 335 - 115148730 aggtgcagtggctcatgcctgtaatcctagcactttgggaggccaaggagggtggattgtttgagctcaggagttagatatcagcctgggcaacatggtgaatctccatctctacaaaa----------------------------------------tatatatatatata----ttagctgagcgtggtggtgcacacctgtagtcccagccacttgggggcctaagacaggaggatcacttgagcccgggaggttactgcagtgagctgagattgtgtcactgcactccagcctaggtgccaaaatgagaccatctccaaaagaaaaaaaaaagaaa---gaaaGATACCCTAAATCATCCTTCCAAAAGCCATAGTg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80529973 330 + 95678458 aggtgcagtggcttacgcctgtaatcctggcactttgggaggtcaaggatggtggattgtttgagctcaggagttagagatcagcctgggcaacatggcgaattcccatctccatata-----------------------------------------tatatttttatatatttattagctgggcatggtggcacacacctgtagtccaagctac-tgggggggtaagacaggaggatcacttgagcctgggaggttattgcggtgagccgagattgtgtcactgcactccagcctagttgccaaaatgagaccatctccaaaacaaaaaaa----------gaaaGATACCCTAAATCATCCTTCCAAAAGCCATAGTg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80956960 331 - 96509753 aggtgcagtggcttacgcctgtaatcctggcactttgggaggtcaaggagggtggattgtttgagctcaggagttagagatcagcctgggcaacatggcgaattcccatctccatata-----------------------------------------tatatttttatatatttattagctgggcatggtggcacacacctgtagtcccagccacttgggggggtaagacaggaggatcacttgagcctgggaggttactgcggtgagccgagattgtgtcactgcactccagcctagttgccaaaatgagaccatctccaaaacaaaaaaa----------gaaaGATACCCTAAATCATCCTTCCAAAAGCCATAGCg i macFas5.chr10 C 0 C 0 s chlSab2.chr19 18478657 327 + 33263144 aggtgcagtggcttatgcctgtaatcctggcactttgggaggccaaggagggtggattgtttgagctcaggagttggagatcagcctgggcaacatggcaaatccccatctccatata-----------------------------------------tatatttttatatatttattagctgggcatggtggcacatacctgtagtcccagccacttgggggggtaagacaggaggatcacttgagcctgggaggttactgcggtgagccgagattgtgtcactgcactccagcctagttgccaaaatgagaccatctccaaaacaaaa--------------aaaGATACCCTAAATCATCCTTCCAAAAGCCATAGCg i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40815582 814 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C e papAnu2.chr10 76212141 1200 + 90941950 I a score=65541.000000 s hg38.chr22_KI270876v1_alt 32225 28 + 263666 gctgagcgcagtggctcacgcctgtaat s panTro4.chr22 34410601 28 + 49737984 gctgagtgcagtggctcacgcctgtaat i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30822852 28 + 46535552 gctgagtgcagtggctcacacctgtaat i ponAbe2.chr22 C 0 I 594 s nomLeu3.chr7b 100377344 28 - 115148730 gctgagtgcagtggctcacgcctgtaat i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80530303 28 + 95678458 gccgagtacagtggctcacacctgtaat i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80957291 28 - 96509753 gccgagtacagtggctcacacctgtaat i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76213341 28 + 90941950 GCTGaatgcggtggcttatgcctgtaat i papAnu2.chr10 I 1200 C 0 s chlSab2.chr19 18478984 28 + 33263144 gccgagtgcagtggctcacgcctgtaat i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40815582 814 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C a score=40725.000000 s hg38.chr22_KI270876v1_alt 32253 20 + 263666 cccagcattttgagaggcca s panTro4.chr22 34410629 20 + 49737984 cccagcactttgagaggccg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30823474 20 + 46535552 cccagcactttgagaggctg i ponAbe2.chr22 I 594 C 0 s nomLeu3.chr7b 100377372 20 - 115148730 cccaacactttgtgaagcca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80530331 20 + 95678458 cccggcactttgtgaagcca i rheMac3.chr10 C 0 I 618 s macFas5.chr10 80957319 20 - 96509753 cccggcactttgtgaagcca i macFas5.chr10 C 0 I 620 s papAnu2.chr10 76213369 20 + 90941950 cccagcattttgagaggctg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18479012 20 + 33263144 cccggcactttgtgaagcca i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40815582 814 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C a score=103547.000000 s hg38.chr22_KI270876v1_alt 32273 44 + 263666 aggcgggcggatcacctgaggtcaggagtttgagaccagcctgg s panTro4.chr22 34410649 44 + 49737984 aggcgggcggatcacctgaggtcaagagtttgagaccagcctgg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30823494 44 + 46535552 aggcaggcggatcacctgaggtcaggagtttgagaccagcctgg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100377392 44 - 115148730 aagtgggtggatcacctgaggtcaggagttcgagatcagcctgg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80530969 44 + 95678458 aggcgggcagatcacctgaggtcaggagttcaagaccagcctga i rheMac3.chr10 I 618 C 0 s macFas5.chr10 80957959 44 - 96509753 aggcgggcagatcacctgaggtcaggagttcaagaccagcctga i macFas5.chr10 I 620 C 0 s papAnu2.chr10 76213389 44 + 90941950 aggcgggcagatcacctgaggtcaggagtttaagaccagcctga i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18479032 44 + 33263144 agatgggtggatcacctgaggtcaggagttcgagaccagcctgg i chlSab2.chr19 C 0 I 628 e canFam3.chr10 40815582 814 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C a score=59845.000000 s hg38.chr22_KI270876v1_alt 32317 26 + 263666 ccatcatggtgaaaccctgtctctac s panTro4.chr22 34410693 26 + 49737984 ccatcatggtgaaaccctgtctctac i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30823538 26 + 46535552 ccatcgtggtgaaaccctgtctctac i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100377436 26 - 115148730 ccaacagggcaaaatcccatctctac i nomLeu3.chr7b C 0 I 615 s rheMac3.chr10 80531013 26 + 95678458 ccatcatggtgaaaccctgtctctac i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80958003 26 - 96509753 ccatcatggtgaaaccctgtctctac i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76213433 26 + 90941950 ccatcatggtgaaaccctgtctctac i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18479704 26 + 33263144 ccatcatggtgaaaccctctctctac i chlSab2.chr19 I 628 C 0 e canFam3.chr10 40815582 814 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C a score=605680.000000 s hg38.chr22_KI270876v1_alt 32343 280 + 263666 taaaaatacaaaaattagccaggcatggtggcaggcacctgtaatcccagctactcagaaggctgaggcagaagagtcagttgaacctgggaagtggaggttgcagtgactgagactgcaccactgcactccagcctgggcagcagagagaagctccatcgcaaaaa-------aaaaaaaaaag--------aaagaaaa-gaaaaGAAAAAAAAATAGGTGAGGACTGGGAGAGACAGGTTTCAGGCATGGAGAAGGGAGTCATATTTATTAATCATATTATAAGCTTAAATTT s panTro4.chr22 34410719 288 + 49737984 taaaaatacaaaaattagccaggcatggtggcaggcacctgtaatcccagctactcagaaggctgaggcaggagagtcacttgaacctgggaagtggaggttgcagtgactgagattgcaccactgcactccagcctgggcagcagagagaagctccatcgcaaaaa-------aaaaaaaaaaagaaaaagaaaagaaaa-gaaaagaaaagaaaaTAGGTGAGGACTGGGAGAGACAGGTTTCAGGCATGGGGAAGGGAGTCATATTTATTAATCATATTATAAGCTTAAATTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30823564 269 + 46535552 taaaaatacaaaaattagccaggcatggtggcaggcacctgtaatcccagctactcagaaggctgaggcaggagaatcacatgaacccaggaagtggaggttgcagtgactgagattatgccactgcactccagcttgggcaacagagagaagctccatggcaaaaa-------aaaaaaaaaaa--------------------aaaaaaTAGACTTAGGTGAGGACTGGGAGAGACAGGTTTCAGGCATAGGGAAGGGAGTCACATTTATTAATCATATTATTAGCTTAAATTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100378077 271 - 115148730 taaaaatacaaaaattagccaggcatggtagcaggcaactgtaatcccagctactcagaaggctgaggcaggagagtcacttgaacctgggaagtgtaggttgcagtgactgagattgcaccactgcactccagcctgggcaacagagagaagctccatcaaaaaaa-------aaaaaaagaag------------------aaaaaaaaTAGACTTAGGTGAGGACTGGGAGAGACAGGTTTCAGGCATGGGAAAGGGAGTCACATTTATTAATCATATTATAAGCTTAAATTT i nomLeu3.chr7b I 615 C 0 s rheMac3.chr10 80531039 281 + 95678458 taaaaatacaaaacttagccaggcatggtggcaggcacctgtaatcccagctactcagaaggctgtggcaggagagccacttgaacctaggtggcagaggttgcagtgactgagatcacaccactgcactccagcctgggcgac--agagagcctctattgcaaaag-------aaaaaaaaaaa----gaaaaaagaaaa--gaaaaaaaTAGACTTAGGTGAGGACTGGGAGAGACAGGTTTCAGGAATGGGGAAGAGAGTCACATTTATTAATCATATTATAAGCTTAAATTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80958029 282 - 96509753 taaaaatacaaaacttagccaggcatggtggcaggcacctgtaatcccagctactcagaaggctgaggcaggagagtcacttgaacctaggtggcagaggttgcagtgactgagatcacaccactgcactccagcctgggcgac--agagagcctctattgcaaaag------aaaaaaaaaaaa----gaaaaaagaaaa--gaaaaaaaTAGACTTAGGTGAGGACTGGGAGAGACAGGTTTCAGGAATGGGGAAGAGAGTCACATTTATTAATCATATTATAAGCTTAAATTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76213459 284 + 90941950 taaaaatacaaaacttagccaggcat-gtggcaggcacctgtaatcccagctactcagaaggctgaggcaggagagtcgcttgaacccaggtggcggaggttgcagtgactgagatgacaccactgcactccagcctgggcgacagagagagcctccattgcaaaaa-------aaaaaaaaaag----aaaaaaagaaaaagaaaaaaaatagacttagGTGAGGACTGGGAGAGACAGGTTTCAGGAATGGGGAAGGGAGTCACATTTATTAATCATATTAtaagcttaaattt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18479730 288 + 33263144 taaaaatacaaaacttagccaggcatggtggcaggcacctgtaatcccagctactcagaaggctgaggcaggagagttgcttgaacctaggtggcggaggttgcagtgactgagatcacaccactgcactccagcctgggtgac--agagagcctctattgcaaaagaaaaagaaaaaaaaaaaa----gaaaaaagaaaa--gaaaaaaaTAGACTTAGGTGAGGACTGGGAGAGACAGGTTTCAGGAATGGGGAAGAGAGTCACATTTATTAATCATATTATAAGCTTAAATTT i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40815582 814 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C a score=381498.000000 s hg38.chr22_KI270876v1_alt 32623 138 + 263666 TAAAAAATCTAAAGCATGCC------ATGTGGCAAAC--AAGGAAATTTGCAAGTTCCCGGTTCCAAGGTGTTACCTGGTAAGTTCTTTTAAGCTTTCAGAAAACAAGCAATTCTCACGTTGTACAAATTGTCCCAGAAATAGAAA s panTro4.chr22 34411007 138 + 49737984 TAAAAAATCTAAAGCATCCC------ATGTGGCAAAC--AAGGAAATTTGCAAGTTCCCGGTTCCAAGGTGTTACCTGGTAAGTTCTTTTAAGCTTTCAGAAAACAAGCAATTCTCACGTTGTACAAATTGTCCCAGAAATAGAAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30823833 138 + 46535552 TAAAAAATCTAAAGCATCCC------ATGTGGCAAAC--AAGGAAATTTGCGAGTTCCCGGTTCCAAGGTGTTACctggtaagttcttttaacctttcagaaaacaagcaattctcatgttgtacaaattgtcccagaaatataaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100378348 138 - 115148730 TAAAAAATCTAAAGCATCCC------ATGTGGCAAAC--AAGGAAATTTGCAAGTTCCTGGTTCCAAGGTGTTACctggtaagttctttaaagctttcagaaaacgagcaattctcacgttgtacaaattgtcccagaaatagaaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80531320 138 + 95678458 AAAAAAATCTAAAGCATCCC------ATGTGGCAAAT--GAGGAAATTTGCAAGTTTCTGGTTCCAAggtgttacctggtaagttctcttaagctttcagaaaacaaacaattctcatgttgtacaaattgtcccagaaatagaaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80958311 138 - 96509753 AAAAAAATCTAAAGCATCCC------ATGTGGCAAAT--GAGGAAATTTGCAAGTTTCTGGTTCCAAGGTGTTACctggtaagttctcttaagctttcagaaaacaaacaattctcatgttgtacaaattgtcccagaaatagaaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76213743 138 + 90941950 aaaaaaatctaaagcaTCCC------ATGTGGCAAAT--GAGGAAATTTGCAAGTTTCTGGTTCCAAGGTGTTACCTGGTAAGTTCTCTTAAGCTTTCAGAAAACAAGCAATTCTCATGTTGTACAAATTgtcccagaaatagaaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18480018 138 + 33263144 AAAAAAATCTAAAGCATCCT------ATGTGGCAAAT--GAGGAAATTTGCAAGTTTCTGGTTCCAAGGTGTTACctggtaagttctcttaagctttcagaaaacaaacaattctcatgttgtacaaattgtcgcagaaatagaaa i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40816396 117 - 69331447 TAAAAAATCAAAAGCATCCCATGAAGATGTGGCAAACATAAGAAAATCTAC-----------------------------AAGTTCTTTTAAGCTTCCAGAAAACAAGCAATTCTCACATCATATGAATTGCCTCAGAAACAGAAA i canFam3.chr10 I 814 I 945 e calJac3.chr1 198200869 0 + 210400635 C a score=12740.000000 s hg38.chr22_KI270876v1_alt 32761 5 + 263666 AAATA s panTro4.chr22 34411145 5 + 49737984 AAATA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30823971 5 + 46535552 aaata i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100378486 5 - 115148730 aaata i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80531458 5 + 95678458 aaata i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80958449 5 - 96509753 aaata i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76213881 5 + 90941950 aaata i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18480156 5 + 33263144 aaata i chlSab2.chr19 C 0 I 728 e canFam3.chr10 40816513 945 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C a score=2916.000000 s hg38.chr22_KI270876v1_alt 32766 2 + 263666 CG s panTro4.chr22 34411150 2 + 49737984 CG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30823976 2 + 46535552 ag i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100378491 2 - 115148730 cg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80531463 2 + 95678458 cg i rheMac3.chr10 C 0 I 727 s macFas5.chr10 80958454 2 - 96509753 cg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76213886 2 + 90941950 cg i papAnu2.chr10 C 0 C 0 e canFam3.chr10 40816513 945 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C e chlSab2.chr19 18480161 728 + 33263144 I a score=3128.000000 s hg38.chr22_KI270876v1_alt 32768 3 + 263666 TTA s panTro4.chr22 34411152 3 + 49737984 TTA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30823978 3 + 46535552 tta i ponAbe2.chr22 C 0 I 727 s nomLeu3.chr7b 100378493 3 - 115148730 tta i nomLeu3.chr7b C 0 I 723 s macFas5.chr10 80958456 3 - 96509753 cta i macFas5.chr10 C 0 I 723 s papAnu2.chr10 76213888 3 + 90941950 cTA i papAnu2.chr10 C 0 I 724 e canFam3.chr10 40816513 945 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C e rheMac3.chr10 80531465 727 + 95678458 I e chlSab2.chr19 18480161 728 + 33263144 I a score=1561.000000 s hg38.chr22_KI270876v1_alt 32771 18 + 263666 CACTATTTTTTATACCCA s panTro4.chr22 34411155 18 + 49737984 CGCTATTTTTTATACCCA i panTro4.chr22 C 0 C 0 e canFam3.chr10 40816513 945 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C e ponAbe2.chr22 30823981 727 + 46535552 I e rheMac3.chr10 80531465 727 + 95678458 I e papAnu2.chr10 76213891 724 + 90941950 I e macFas5.chr10 80958459 723 - 96509753 I e chlSab2.chr19 18480161 728 + 33263144 I e nomLeu3.chr7b 100378496 723 - 115148730 I a score=5600.000000 s hg38.chr22_KI270876v1_alt 32789 2 + 263666 CC s panTro4.chr22 34411173 2 + 49737984 CC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30824708 2 + 46535552 CC i ponAbe2.chr22 I 727 C 0 s nomLeu3.chr7b 100379219 2 - 115148730 CC i nomLeu3.chr7b I 723 C 0 s rheMac3.chr10 80532192 2 + 95678458 CC i rheMac3.chr10 I 727 C 0 s macFas5.chr10 80959182 2 - 96509753 CC i macFas5.chr10 I 723 C 0 s papAnu2.chr10 76214615 2 + 90941950 CC i papAnu2.chr10 I 724 C 0 s canFam3.chr10 40817458 2 - 69331447 CC i canFam3.chr10 I 945 C 0 e calJac3.chr1 198200869 0 + 210400635 C e chlSab2.chr19 18480161 728 + 33263144 I a score=775210.000000 s hg38.chr22_KI270876v1_alt 32791 311 + 263666 ATATGCTATTGCTGGGTGGAGATATAGCAGATCCTTGGTTTTAATGAGGGAGATATCATGAGACCCTCTCAATTGCTCAGGTTTGAAAATAC----------------TACATCAAATAACTTCCTTTGTAAAGTTTAACTAAAAATGTAAAGTTTAACTAAAAACATAAGCAGCTCTTTAAG--CCCCTGCT----------TGAAGCAGTGTGGCAGCGGGGA----AGGGGTCAATCACTGGTTCCATTTCTGGTTAAAGTAGAGGCAGCAGGCAGGACAAGG-TGGCGACATTATC----AAAGAACTCATCTGGATATCAAAACTGTTATGACCCCAAAGCAC s panTro4.chr22 34411175 311 + 49737984 ATATGCTATTGCTGGGTGGAGATATagcagatccttggttttaatgagggagatatcatgagaccctctcaattgctcaggtttgaaaatac----------------tacatcaaataacttcctttgtaaagtttaattaaaaatctaaagtttaactaaaaacataagcagctccttagg--cccctGCG----------TGAAGCAGTGTGGCAGCGGGGA----AGGGGCCAATCACTGGTTCCATTTCTGGTTAAAGTAGAGGCAGCAGGCAGGACAAGG-TGGCGACATTATC----AAAGAACTCATCTGGATATCAAAACTGTTATGACCCCAAAGCAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30824710 310 + 46535552 ATATGCTATTGCTGGGTGGAGATATAGAAGATGCTTGGCTTTAATGAGGGAGATATCGTGAGACCCTCTCAATTGCTCATGTTTGAAAATAC----------------TACACCAAATAACTTCCTTTGTAAAGTTTAACTAAAAATGTAAAGTTTAACTAAAAACATAAGCAGCTCCTCAGG--CCCCTGCG----------TGAAGCAGAGTGGCGG-GGGGA----AGGGGCCAATCACTGGTTCCATCACTGGTTAAAGTAGAGGCAGCAGGCAGAACAAGG-CAGTGACATTATC----AAAGAACTCATTTGGATATCAAAACTGTTAAGACCCCAAAGCAC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100379221 305 - 115148730 ATATGCTATTGCTGGGTGGAGATATAGCAGATTCTTGGCTTTAATGAGGGAGATACCGTGATACCCTCTCAATTGCTCATGTTTGAAAATAC----------------TACATCAAATAACTTCCTTTGTAAAGTTTAACTAAAAATATAAAGTTTAACTAAAGA------CAGCTCCTCAGG--CCCCTGCG----------TGAAGCAGTGTGGCAGGGGGGA----AGGGGCCAATCACTGGTTCCATCACTGGTTAAAGTAGAGGCAGCAGGCAGGACAAGG-CGGCGACATTATC----AAAGAACTCATCTGGATAACAAAAGTGTTAAGACCCCAAAGCAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80532194 313 + 95678458 ATATGCTATTGCTGGGTGGAGATATagcaggtccttagccttaatgagggagttatcctgagaccctctcaactgctcgtgtttgaaaacac----------------tacatcaaataacttcctttgtaaaggttaactaaaaatgtaaagtttaactaaaaacataagcagctcctcaggcccCCCTGCA----------TGAAGCAGTGTGGCAGGGGGGA----AGGGGCCAATCACTGGTTCCATCACTGGTTACAGTAGAGGCAGCAGGCAGGACAAGG-TGGCAACATTATC----AAAGAACTCATCTGAATAACAAAAGTGTTAAGACCCCAAAGCAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80959184 311 - 96509753 ATATGCTATTGCTGGGTGGAGATATAGCAGATCCTTAGCTTTAATGAGGGAGTTATCCTGAGACCCTCTCAACTGCTCGTGTTTGAAAACAC----------------TACATCAAATAACTTCCTTTGTAAAGGTTAACTAAAAATGTAAAGTTTAACTAAAAACATAAGCAGCTCCTCAGG--CCCCTGCA----------TGAAGCAGTGTGGCAGGGGGGA----AGGGGCCAATCACTGGTTCCATCACTGGTTACAGTAGAGGCAGCAGGCAGGACAAGG-TGGCAACATTATC----AAAGAACTCATCTGGATAACAAAAGTGTTAAGACCCCAAAGCAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76214617 311 + 90941950 ATATGCTATTGCTGGGTGGAGATATAGCAGATCCTTAGCCTTAATGAGGGAGTCATCCTGAGACCCTCTCAACTGCTCGTGTTTGAAAATAC----------------TACATCAAATAACTTCCTTTGTAAAGTTTAActaaaaatgtaaagtttaaCTAAAAACCTAAGCAGCTCCTGAGG--CCCCTGCA----------TGAAGCAGTGTGGCAGGGGGGA----AGGGGCCAATCACTGGTTCTATCACTGGTTACAGTAGAGGCAGCAGGCAGGACAAGG-TGGCAACATTATC----AGAGAACTCATCTGGATAACAAAAGTGTTAAGACCCCAAAGCac i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18480889 309 + 33263144 ATATGTTATTGCTGGGTGGAGATACAGCAGATCCTTAGCCTTAATGAGGGAGTTATCCTGAGACCCTCTCAACTGCTCGTGTTTGAAAATAC----------------TACATCAAATAACTTCCTTTGTAAAGTTTAACTAAAAATGTAAAGTTTAACTAAAAACATAAGCAGCTCCTCAGG--CCGCTGCA----------TGAAGCAGTGTGGCAGGGGGGA----TGGGGCCAATCACTGGTTCCATCACTGGTTACAGTAGAGGCAGCAGGCAGGACAAGG-TGGCAACATTATC----AAATAACTCATCTGGATAAC--AAGTGTTAAGACCCCAAAGCAC i chlSab2.chr19 I 728 C 0 s canFam3.chr10 40817460 323 - 69331447 ATCCGGTGCTGCTGGGCAGGAAAGTAGCAGGTCCTTGTATTTAATCAGGAATCTATCCTGAG-CCTCCTCAATGACCCATATCTATATACACATACTACACTTACTATGACAGCAGGAAACATCCTT-------------------TATAAAGTTGAACTAGAAACACAAATAGCTCCT--GG--CCCCTGCAGGGGAGCTCCTGCACCCAGAAAGCAGAGGGGGACACAGGAGCCCATCACCGGCCCTGTTACT-GCCAGAGCCGCCACAGTGGACCGGATGGGGTTGGTGGCATTATACATGGAAGGACTCATATGAATGACAAAAATATGAAGCCCCCGAAGTGC i canFam3.chr10 C 0 I 434 e calJac3.chr1 198200869 0 + 210400635 C a score=1664240.000000 s hg38.chr22_KI270876v1_alt 33102 722 + 263666 ggttgggcgcagtggctcatgcctgtaatcccaacactttgggaggccaacatgggcagatcacttgaggccaggagttcaagaccagcctggccaacatggtgaaaccctgtctctattaaaaatacaaaaaattagccaggctggtagtgcacacctgtagtccc-gttactcgggagggtgaggcaggagaattgcttgaactgggagatcgcgccattgcactgcagcctggacaacagacagagaccccgtctc--aaaaaaaaaaaaaaaaaaaaaaaaGACGCCAAAGTGCCATGataagggagtgtttctataaacatgacaatacatcttctcttaaggaaatagcatagagtcatcaaaaataatagttataacaactgtatagcaagatggaaaatacttgta-taacattacattttaaaaacagggcacgtggccaggcacagcggctcatgcctgtaatcccagcactttgggaggccaaggc----agatgtatcacctgaggttgggagtttgagaccagcctggccaacatggtgaaacccccatctctactacaaatagaaaacttatccaggcatggtggtgcgcacctataattgcaacaactcgggaggctgagacaggagaatcacttgaacccaggaggcgcaggttgcagtgagccgagatcgcaccactgcattccagcctgggtgac--agtgagaccgtctcaaa s panTro4.chr22 34411486 716 + 49737984 ggttgggcgcagtggctcatgcctgtaatcccaacactttgggaggccaacatgggcagatcacttgaggccaggagttcaagaccagcctggccaacatggtgaaaccctgtctctattaaaaatacaaaaaattagccaggctggtagtgcacacctgtagtccc-actactcgggagggtgaggcaggagaattgcttgaactgggagatcgcgccattgcactgcagcctggacaacagacagagaccccgtctc--aaaaacaaaaaaaaaaaa------GACGCCAAAGTGCCATGataagggagtgtttctataaacatgacaatacatcttctcttaaggaaatagcatagagtcatcaaaaataatagttataacaactgtatagcaagatggaaaatacttgta-taacattacattttaaaaacagGGCACGTggccgggcatagcggctcatgcctgtaatcccagcactttgggaggccaaggc----agatgtatcacctgaggttgggagtttgagaccagcctggccaacatggtgaaacccccatctctactacaaatagaaaacttatccaggcatggtggtgcgcacctataattgcaacgactcgggaggctgagacaggagaatcacttgaacccaggaggcgcaggttgcagtgagccgagatcgcaccactgcattccagcctgggtgac--agtgacaccgtctcaaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30825020 727 + 46535552 ggttgggcgcagtggctcacgcctgtaatctcatcactttgggaggccaacatgggcagatcacttgaggccaggagtttgagaccagcctggccaacatggtgaaaccctgtctctattaaaaatacaaaaaattagccaggctggtggtgcacacctgtagtcccagctactcgtgagggtgaggcaggagaattgcttgaaccgggagatcgcgccattgcactgcagcctggacaacagagagagaccccgtctc--aaaaaaaaaaaaaaaaaa--aaaaGACGTCAAAGTGCCATGATAAGGGAGTGTTTCTGTAAACACGGCAATACATCTTCTCTTAAGGAAATAGCATAGAGTCATCAAAAATAATAGTTATAACAACTGTATAGCAAGATGGAAAATACTTGTA-TAACATTACATTTTAAAAACAGGGCACGTggccgggcacagcggctcatgcctgtaatcccagcactttgggaggccaaggcagatagatgtatcacttgaggtggggagtttgagaccagcctggtcaacatggtgaaacccctatctctactacaaatagaaaaattagccgggcgtggtggtgtgcacctgtaattccagctactcgggagactgaaacaggagaatcactcgaacctaggaggtggaggttgcagtgagccgagattgcactgctgcattccagcctggttgacagagtgagaccgtctcaaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100379526 710 - 115148730 GGTTCggcgcagtggctcacgcctgtaatcccaagactttgggaggccaatgtgggcagatcacttgaggccaggagtttgagaccagcctggccaacatggtgaaaccctgtctctattaaaaatacaaaaaattagccaggctggtggtgcacacctatagtcccagctactcgggagggtgaggcaggagaattgcttgaatcgggagatcgtgacattgcattgcagcctggacaacagagagagaccccgtctc--aaaaaaaaaaa-------------GACGCCAAAGTGCCATGataagggagtgtttctataaacatgacaatacatcttctcttaaggaaacagcatagagtcatcaaaaataatagttataacaactgtatagcaagatggaaaatacttgtA-TGACATTACATTTT-AAAACAGGGCACGTggccgggcacagcggctcatgcctgtaatcccagcactttgggaggccgaggc----agttgtatcacctgaggttgagagtttgagaccagcctgacc-acatggtgaaacccccatctctactacaaatagaaaacttagccaggcgtgatggtgtgcacctataattgcaacgactcgggaggctgagacaggagaatcacttgaacccaggaggcggaggttgcagtgagccgagatagcgccactgcattccagcctgggtgacagagtgagactgtctcaaa i nomLeu3.chr7b C 0 I 312 s rheMac3.chr10 80532507 718 + 95678458 ggttgggcacagtggctcacgcctgtaatcccaacactttgggaggccaacgtgggcagatcacttgaggccaggagtttgagattagcctggccaacatgttgaaaccctgtctcttctaaaaatacaaaaaattagccaggatggtagtgcgcacctggagtcccagctacttgggaggctgaggcaggagaattacttgagccgggagatagtgctactgcactgcagcctggacaacagagcaagaccccgtctc---aaaaaaaaaaaaaaaaa------GATGCCAAAGTGCCGTGATAAGGGAGTGTTTCTATAAACAGGACAATACATCTTCTGTTAAGGAAACAGCATAGAGTCATCAAAAATAATCATTATAACAACTGCATAGCAAGATGGAAAATACTTGTA-TAACATTACATTTTAAAAACAGGGCACGTggctggccacatcggctcatacctgtaatcccagcactttgggaggctgaggc----agatggatcacctgaggttgggagtttgagaccagcctggccaacatggtgaaaccctcatctctactacaaatacaagaattagctgggcatggtggtgcacacctataattccaatgactcgggaggctgagacaggacaatcacttgaacccaggaggtggaggttgcagtgagccgagatcgcaccgctgcattccaacctgggtgacagagtgagaccatctcaaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80959495 711 - 96509753 ggttgggcacagtggctcacgcctgtaatcccaacactttgggaggccaacgtgggcagatcacttgaggccaggagtttgagattagcctggccaacatgttgaaaccctgtctcttctaaaaatacaaaaaattagccaggttggtagtgcgcacctgtagtcccagctacttgggaggctgaggcaggagaattacttgaaccgggagatagtgctactgcactgcagcctggacaacagagcaagaccccgtctc----------aaaaaaaaaa------GATGCCAAAGTGCCGTGATAAGGGAGTGTTTCTATAAACAGGACAATACATCTTCTGTTAAGGAAACAGCATAGAGTCATCAAAAATAATCATTATAACAACTGCATAGCAAGATGGAAAATACTTGTA-TAACATTACATTTTAAAAACAGGGCACGTggctggccacatcggctcatacctgtaatcccagcactttgggaggctgaggc----agatggatcacctgaggttgggagtttgagaccagcctggccaacatggtgaaaccctcatctctactacaaatacaagaattagctgggcatggtggtgcacacctataattccaatgactcgggaggctgagacaggacaatcacttgaacccaggaggtggaggttgcagtgagccgagatcgcaccgctgcattccaacctgggtgacagagtgagaccatctcaaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76214928 722 + 90941950 ggttgggcacggtggctcacgcctgtaatcccaacactttgggaggccaacgtaggcagatcacttgaggccaggagtttgagattagcctggccaacatgttgacaccctatctcttctaaaaatacaaaaaattagccaggttggtagtgcgcacctgtagtcccagctacttgggaggctgaggcaggagaattacttgaaccgggagatagtgctactgcactgcagcctggacaacagagcaagaccccgtctcaaaaaaaaaaaaaaaaaaaa------gatgccaaagTGCCGTGATAAGGGAGTGTTTCTATAAACAGGACAATACATCTTCTCTTAAGGAAACAGCATAGAGTCAtcaaaaataatcattataaCAACTGCATAGCAAGATGGAAAATACTTGTAttaacattacattttaaaaacagggcACGTGGCTGgccacattggctcatgcctgtaatcccagcactttgggaggctgaggc----agatggatcatctgaggttgggagtttgagaccagcctggccaacatggtgaaaccctcatctctactacaaatacaagaattagctgggcatggtggtgcacacctataattccaatgactcgggaggctgagacaggacaatcacttgaacccaggaggtggaggttgcagtgagccgagatcgcaccgctgcattccaacctgggtgacagagtgagaccatctcaaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18481198 719 + 33263144 ggttgggcacggtggctcacgcctgtaatcccaacactttgggatgccagcgtgggcagatcacttgaggccaggagtttgagattagcctggccaacatgttgaaaccctgtctcttctaaaaatacaaaaaattagccaggttggtagtgcgcacctatagtcccagctactcgggaggctgaggcaggagaattacttgaaccgggagatagtgccactgcactgcagcctggacaacagagcaagaccctgtctc--aaaaaaaaaaaaaaaaaa------GATGCCAAAGTGCCATGATAAGGGAGTATTTCTATAAACAGGACAATACATCTTCTCTTAAGGAAACAGCATAGAGTCATCAAAAATAATCATTATAACAACTGCATAGCAAGATGGAAAATACTTGTA-TAACATTACATTTTAAAAACAGGGCACGTggctggccacatcggctcatgcctgtaatcccagcactttgggaggctgaggc----agatggatcacctgaggtcgggagtttgagaccagcctggccaacatggtgaaacccccatctctactacaaatacaagaattagctgggtgtggtgatgtgcacctgtaattccaatgactcgggaggctgagacaggacaatcacttgaacccaggaggtggaggttgcagtgagccgagattgcaccgctgcattccagcctgggtgacagagtgagaccgtcttaaa i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40817783 434 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C a score=386020.000000 s hg38.chr22_KI270876v1_alt 33824 205 + 263666 aataataataataata--aataataataataaATAAAAAcaggacacaccattataagtataaaagccatgcgaaaaataatacggatttgaaaaataacgggaagtagagaatgaaatcaatagttatgttgcaggagaactaggggtgatttttGTCAAATTATATTTTTTGTCAAATTTGACTA-TCTTTTTGTCAAATTATATT s panTro4.chr22 34412202 199 + 49737984 aa-----ata-taata--aataataataataaataaaaaCAGGACACACCATTATAAGTATAAAAGCCATGCGAAAAATAATACGGATTTGAAAAATAACTGGAAGTAGAGAATAAAATCAATAGTTATGTTGCAGGAGAACTAGGGGTGATTTTTGTCAAATTATATTTTTTGTCAAATTTGACTA-TCTTTTTGTCAAATTATATT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30825747 188 + 46535552 aa-------a-----------aataataataaataaaaaCAGGACACACCATTGTAAGTATAAAAGCCATGCGAAAAATAATATGGATTTGAAAAATAACTGGAAGTAGAGAATAAAATCAATAGTTATGTTGCAGTAGAACTAGGGGTGATTTTTGTCAAATTATA-TTTTTGTCAAATTTGACTA-TGTTTTTGTCAAATTATATT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100380548 207 - 115148730 aataataataataataataataataataaAAAATAAAAACAGGACACACCATTATAAGTATAAAAGCCATGCGAAAAATAATATGGATTTGAAAAATAACTGGAAGCAGAGAATAAAATCAACAGTTACGTTGCAGGAGAACTAGGGGTAATTTTTGTCAAATTATATTTTTTGTCAAATTTGGCTA-TCTTTTTGTCAAATTATATT i nomLeu3.chr7b I 312 C 0 s rheMac3.chr10 80533225 187 + 95678458 ------------aaaaaaaataataataaataataaaaaCAGGACACACCATTATAAGTATAAAAACCATGCAAGAAATAATACGGATTTGAAAAATTACTGGAAGTAGAGAATAAAATCAATAGTAATG--------GAACTAGCGGTGATTTTTGTCAAATTATATTTTTTGTCAAATTTGACAA-TTTTTTTGTCAAATTATATT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80960206 186 - 96509753 ------------aaaaaaaa-aataataaataataaaaaCAGGACACACCATTATAAGTATAAAAACCATGCAAGAAATAATACGGATTTGAAAAATTACTGGAAGTAGAGAATAAAATCAATAGTAATG--------GAACTAGCGGTGATTTTTGTCAAATTATATTTTTTGTCAAATTTGACAA-TTTTTTTGTCAAATTATATT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76215650 187 + 90941950 ------------aaaatgat-aataataaataataaaaacaggacACACCATTATAAGTATAAAAACCATGCAAGAAATAATACGGATTTGAAAAGTTACTGGAAGTAGAGAATAAAATCAATAGTAGTG--------GAACTAGTGGTGatttttgtcaaattatattttttgtcaaatttgacagttttttttgtcaaattatatt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18481917 180 + 33263144 ------------aa-------aataataaataataaaaaCAGGACACACCATTGTAAGTATAAAAACCATGCAAGAAATAATATGAATTTGAAAAATTACTGGAAGTAGAGAATAAAATCAATAGTAGTG--------AAACTAGGGGTGATTTTTGTCAAATTATATTTTTTGTCAAGTTTGACAA-TTTTTTTGTCAAATTATATT i chlSab2.chr19 C 0 I 291 e canFam3.chr10 40817783 434 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C a score=2800.000000 s hg38.chr22_KI270876v1_alt 34029 1 + 263666 G s panTro4.chr22 34412401 1 + 49737984 G i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30825935 1 + 46535552 G i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100380755 1 - 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80533412 1 + 95678458 G i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80960392 1 - 96509753 G i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76215837 1 + 90941950 g i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18482388 1 + 33263144 g i chlSab2.chr19 I 291 C 0 e canFam3.chr10 40817783 434 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C a score=85924.000000 s hg38.chr22_KI270876v1_alt 34030 27 + 263666 AAAATACATTTAAAGTGATTTTTGAGC s panTro4.chr22 34412402 27 + 49737984 AAAATACATTTAAAGTGATTTTTGAGC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30825936 27 + 46535552 AAAATACATTTAAATTGATTTTTGAGC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100380756 27 - 115148730 AAAATACATTTAAAGTGATTTTTGAGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80533413 27 + 95678458 AAAATACATTTAAAGTGATTTTTGAGC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80960393 27 - 96509753 AAAATACATTTAAAGTGATTTTTGAGC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76215838 27 + 90941950 aaaatacatttaaagtgatttttgAGC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18482389 27 + 33263144 aaaaTACATTTAAAGTGATTTTTGAGC i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40818217 27 - 69331447 AATATATATTTAAAGTGATTTTTGAGC i canFam3.chr10 I 434 I 543 e calJac3.chr1 198200869 0 + 210400635 C a score=5096.000000 s hg38.chr22_KI270876v1_alt 34057 2 + 263666 AA s panTro4.chr22 34412429 2 + 49737984 AA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30825963 2 + 46535552 AA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100380783 2 - 115148730 AA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80533440 2 + 95678458 AA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80960420 2 - 96509753 AA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76215865 2 + 90941950 AA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18482416 2 + 33263144 AA i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40818244 543 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C a score=717446.000000 s hg38.chr22_KI270876v1_alt 34059 284 + 263666 CAAAAGAAGCTGCAATGTGAGAGAGAGTGTCTGAACAAGGTGGACTCTGCTG-----TGTTGCCTGCCTGGGTAAAACCAACCACCATCCCGCCCACGAGCCTTGTCATCAGGCAGGTGTCATTCAGCAGGGACTGGACTGTGCCTCTCTCAGGGCTATAGATGATAGGCACTGGACAGAATGAGCGTTCACTTGCTCCCAAGTTAAAAATGTTATCAATTAACATGGCCCCGATTGTCTTGGTGCCTATCATTGTGTTGTTGGATGATTCTCAGAAGACTTTTGTGAC s panTro4.chr22 34412431 284 + 49737984 CAAAAGAAGCTGCAATGTGAGAGAGAGTGTCTGAACAAGGTGGACTCTGCTG-----TGTTGCCTGCCTGGGTAAAACCAACCACCAACCCGCCCACGAGCCTTGTCATCAGGCAGGTGTCATTCAGCAGGGACTGGACTGTGCCTCTCTCAGGGCTATAGATGATAGGCACTGGACAGAATGAGCGTTCACTTGCTCCCAAGTTAACAATGTTATCAATTAACATGGCCCCGATTGTCTTGGTGCCTATCATTGTGTTATTGGATGATTCTCAGAAGACTTTTGTGAC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30825965 280 + 46535552 CAAAAGAAGCTGCAATGT----GATAGTGTCTGAACAAGGTGGACTCCGCCG-----TGTTGCCTGCCTGGGTAAAACCAACCACCATCCCACCCATGAGCCTTGTCATCAGGCAGCTGTCATTCAGCAGGGACTGGACTGTGCCACTCTCAGGGTTATAGATGATGGGCACTGGACAGAATGATTGTTCACTTGCTCCCAAGTTAACAATGTTATCAATTAACATGGCCCCGATTGTCTTGGTGCCTATCATTGTGTTATTGGATGATTCTCAGGAGACTTTTGTGAC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100380785 281 - 115148730 CAA---AAGCTGCAATGTGAGAGAGAGTGTCTGAACAAGGTGGACTCTGCCG-----TGTTGCCTGCCTGGGTAAAACCAACCACCATCCCTCCCACGAGGCTTGTCATCAGGCAAGTGTCATTCAGCAGGGACTGGACTGTGCCTCTCTCAGGGTTATAGATGATAGGCACTGGACAGAATGATTGTTCACTTGCTCCCAAGTTAACAATGTTATCGATTAACAGGGCCCCGATTGTCTTGGCGCCTATCATTGTGTTATTGGATGATTCTCAgaagacttttgtgac i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80533442 283 + 95678458 CAAAAGAAGCTGCAATGTGAGAAAGAGTGTCTGAACAAGGTGGACTCTGCCG-----TGTTGCCTGCCTGGGCAAAACCAACCACCATCCCGCCCACGAGCCTTGTCATCAGGCGGGTGTCATTCAGCAGGGACCAGACTGTGCCTCTCTCAGGATTATAGATGATAGGCACTGGACAGAATGATCGTTCACTTGCTCCCAAGTTAACAGTGTTATCAA-TAACATGGCCCCGATTGTCTTGGTGCCTATCATTGTGTTATTGGATGATTCTCAgaagatttttgtgac i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80960422 283 - 96509753 CAAAAGAAGCTGCAATGTGAGAAAGAGTGTCTGAACAAGGTGGACTCTGCCG-----TGTTGCCTGCCTGGGCAAAACCAACCACCATCCCGCCCACGAGCCTTGTCATCAGGCGGGTGTCATTCAGCAGGGACCAGACTGTGCCTCTCTCAGGATTATAGATGATAGGCACTGGACAGAATGATCGTTCACTTGCTCCCAAGTTAACAGTGTTATCAG-TAACATGGCCCCGATTGTCTTGGTGCCTATCATTGTGTTATTGGATGATTCTCAGAAGATTTTTGTGAC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76215867 283 + 90941950 CAAAAGAAGCTGCAATGTGAGAAAGAGTGTCTGAACAAGGTGGACTTTGCCG-----TGTTGCCTGCCTGGGCAAAACCAACCACCATCCCGCCCACGAGCCTTGTCATCAGGCAGGTGTCATTCAGCAGGGACCAGACTGTGCCTCTCTCAGGATTATAGATGATAGGCACTGGACAGAATGATCGTTCACTTGCTCCCAAGTTAACAGTGTTATCAA-TAACATGGCCCCGATTGTCTTGGTGCCTATCATTGTGTTATTGGATGATTCTCAGAAGACTTTTGTGAC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18482418 283 + 33263144 CAAAAGAAGCTGCAATGTGAGAAAGAGTGTCTGAACAAGGTGGAGTCTGCCG-----TGTTTCCTGCCTGGGCAAAACCAACCACCATCCTGCCCACGAGCCTTGTCATCAGGCAGGTGTCATTCAGCAGGGACCAGACTGTGCCTCTCTCAGGATTATAGATGATAGGCACTGGACAGAATGATCGTTCACTTGCTCCCAAGTTAACAGTGTTATCAA-TAACATGGCCCCAATTGTCTTGGTGCCTACCATTGTGTTATTGGATGATTCTCAGAAGACTTTTGTGAC i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40818787 227 - 69331447 caaaataagcaatatcccaaagcagcatgtct---cacagtgacattttctgTCACCTTTCACCTACCTGGTTAA----AACAACTAACCAGCCaatgaa-ctcatggctacggaggt----ttaagcagagactggac---aaccctgccaggattgtagaTT---------------------------------------------GTGATAAAAA-TAACATGACTTTGATCATCTTTGTGATTGTCATTGGGTTATTGGATGATTATCGGAAGAC-TTGGTGAC i canFam3.chr10 I 543 C 0 e calJac3.chr1 198200869 0 + 210400635 C a score=1609052.000000 s hg38.chr22_KI270876v1_alt 34343 689 + 263666 TTAACgaaatgggaaaag-ttcccttatcccccttgcacagtataaaacggggtgtggctcacttcttcggtgccctgcggctcaaacccctagggggagcatgcggaccggcaggtcttggggagcgtgggctccgaccccacagcagccccatctagggttgagtgtttgcagctcccg-agccccagtgagcttatcggaaggacaaagcagag----ggtctaatttctgtactccagggttctaaccctagtatgccagaaaaattggatcacacgtgggcttggagagt-gagtgcaaggttttatcgagtgtagttctcagcagatggatggggagccagaaaggggatggagtgggaaggtggtcttcccctggatttgggccactcagc-----ggttctcctccaactgcctttggctaaattccatgtcattcagccgtggatgacctgtcagcatccgccggtgtattcttcttcctgtgtgttcctctcgatgtccagctacttgtgtgtgtctgcctgttaggtggggatatggcgggccagagtggtcttagaaaatgcagcatttgggagcgaaagcagaaatgcttgtcctcacttagatccatgggcccaggcccgagggtggaaccctcaccggggaccatgcctttatgtaagcagcacttccctgcctgctcccatatca s panTro4.chr22 34412715 689 + 49737984 TTAACgaaatgggaaaag-ttcccttatcccccttgcacggtataaaacggggtgtggctcacttcttccgtgccctgcggctcaaacccctagggggagcatgcagaccggcaggtcttggggagcgtgggctccgaccccacagcagccccatctagggttgagtgtttgcagctcccg-agccccagtgagcttatcggaaggacaaagcagag----agtctaatttctgtactccagggttctaaccctagtatgctagaaaaattcgatcacacgtgggcttggagaat-gagtgcaaggttttaccgagtgtagttctcagcagatggatggggagccagaaaggggatggagtgggaaggtggtcttcccctggatttgggccactcagc-----ggttctcctccaactgcctttggctaaattccatgtcattcagccgtggatgacctgtcagcatctgtcggtgtattcttctgcctgtgtgttcctctcgatgtccagctacttgtgtgtgtctgcctgttaggtggggatatggcgggccagagtggtcttagaaaatgcagcatttgggagcgaaagcagaaatgcttgtcctcacttagaaccatgggcccaggcccgagggtggaaccctcaccggggaccatgcctttatgtaagcagcgcttccctgcctgctcccatatca i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30826245 695 + 46535552 TTAAtgaaatgggaaaag-ttcccttatcccccttgcacggtataaagcagggtgtggctcacttcttccgtgccctgcggctcaaacccctagggggagcatgcggacgggcaggtcgtggggagcgtgggctccgaccccacagcagcgccatctagggttgagtgtttgcagctcccg-agccccagtgagcttatcggaaggataacgcagag----ggtctaatttctgtactccagggttctaaccctagtatgccagaaaaattggatcacacgtgggcttggagaatggagtgcaaggttttattgagtatagctctcagcagatggatggggagccagaaaggggatggagtgcgaaggtgatcttcccctggagttgggccactcagcggccgggttctcctccaactgcctttggctgaatttcatgtcatccagccgtggatgacctgtcagcatctgtctgtgtgttcttctgcctgtgtgttcctctcgatgtccagctgcttgtgtgtgtctgcctgttaggtggggatatggcgggccagagtggtcttagaaaatgcagcatttgggagcgaaaacagaaatgcttgtcctcacttagatccatgggcccaggcccgagggtggaaccctcaccggggaccatgcctttctctacgccgcacttccccacccgctcccatatca i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100381066 694 - 115148730 ttaatgaaacgggaaaag-ttcccttatcctctttgcacggtgtaaaacagggtgtggctcacttcttcggtgccctgcggcccaaacccctagggggagcatgcggacaggcaggtcatggggagcgtgggctccgaccccacagcagcgccatctagggttgagtgtttgcagctcccg-agctccagtgagttcattggaacgataaggcagag----ggtctaatttctgtactccagggttctaaccctagtatgccagaaaaattggatcacacgtgggcttggagaat-gagtgcaaggttttgttgagtatagctctcagcagatggatggggagccggaaaggggatggagtgggaaggtagtcttcccctggagttgggccactcagcggctgggttctcctccaactgcctttggttgaatttcatgtcatccagctgtggatgacctgtcagcatctgtcggtgtgttcttctgcctgtgtgttcctctcgacgtccagctgcttgtgtgtgtctgcctgttaggtggggatatggcaggccagagtggtcttagaaaatgcagcatttgggagcgaaaacagaaatgctcgtcctcacttagatccatgggcccaggcccaagggtggaaccctcaccggggaccatgcctttctctacgcagcacttccccgcctgctcccatatca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80533725 695 + 95678458 ttaatggaatgggaaaagtttcccttatcccccttgcacggtataaaacaggctgtggctcacttcttcggtgccctgcagctcaaacccctaggggcagcatacggacgtgcaggtcgtgaggagcatgggctccgaccccacagcagtgccatctagggttcagtgtttgcagctcccgaagccccagggagcttatcggaaggataaggcagagctctggtctaatttctgtattccagggttcttgccctagtatgccggaaaagttggatcacacgtgggcttggagaat-gagtgcaaggttttattgaatgaagctctcagcagatggatggggagccagaaaggggatggaatgggaaggtggtcttcccctggagttgggccactcagcggccgggttctcctccaactgcctttggctgaattccatgtcatccagcc--gtatgacctgtcagcatctgtcggtgtgttctgc---ctgtgtgttcctctcgatgtccagctgcttgtgtgtttctgcctgctaggtggggacatggcgagccagagaggtcttggaaaatgcaacatttgggaacgaaaacagaaatgcttgtcctcacttagatccatgggcccaggccggagggtggaacactcaccagggaccatgcccttctctatgcagcacttccccgcccactcccatttca i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80960705 697 - 96509753 TTAAtggaatgggaaaagtttcccttatcccccttgcacggtataaaacaggctgtggctcacttcttcggtgccctgcagctcaaacccctaggggcagcatacggacgtgcaggtcgtgaggagcatgggctccgaccccacagcagcgccatctagggttcagtgtttgcagctcccgaagccccagggagcttatcggaaggataaggcagagctctggtctaatttctgtattccagggttcttgccctagtatgccggaaaaattggatcacacgtgggcttggagaat-gagtgcaaggttttattgaatgtagctctcagcagatggatggggagccagaaaggggatggagtgggcaggtggtcttcccctggagctgggccactcagcggccgggttctcctccagctgcctttggctgaagtccgtgtcatccagccgtgtatgacctgtcagcatctgtcggtgtgttctgc---ctgtgtgttcctctcgatggccagctgcttgtgtgtttctgcctgctaggtggggacatggcgagccagagaggtcttggaaaatgcaacatttgggaacgaaaacagaaatgcttgtcctcacttagatccgtgggcccaggccggagggtggaacactcaccagggaccatgcccttccctatgcagcacttccccgcccactcccatttca i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76216150 697 + 90941950 TTAATGGAATGGGAAAAGTTTCCCTTATCCCCCTTGCACGGTGTAAAACAGGCTGTGGCTCACTTCTTCGGTGCCCTGCAGCTCAAACCCCTAGGGGCGGCATATGGACGTGCAGGTTGTGAGGAGCatgggctctgaccccacagcaGTGCCATCTAGGGTTCAGTGTTTGCAGCTCCCGAAGCCCCAGGGAGCTTATTGGAAGGATAAGGCAGAGCTCTGGTCTAATTTCTGTATTCCAGGGTTCTTGCCCTAGTATGCCGGAAAAAttggatcacacgtgggcttggagaat-gagcgcaaggttttattgaatgtagctctcagcagatggatggggagccagaaaggggatggagtgggaaggtggtctttcCCTGGAGTTGGGCCACTCAGCGGCCGGGTTCTCCTCCAACTGCCTTTGGCTGAATTCCATGTCATCTAGCCGTGGATGACCTGTCAGCAtctgtctgtgtgttctgc---ctgtgtgttcctctcgaggtccagctgcttgtgtgtgtctgcctgctaggTGGGGACATGGCGAGCCAGAgaggtcttggaaaatgcaacatttgggaaCGAAAACAGAAATGCTTGTCCTCACTTAGATCCATGGGCCCAGGCCGGAGGGTGGAACCCTCACCAGGGACCATGTCCTTCTCTACGCAGCACTTCCCCGCCCACTCCCATTTCA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18482701 699 + 33263144 TTAAtgaaatgggaaaag-ttcccttattccccttgcacggtataaaacaggctgtggctcacttctttggtgccctgcagctcaaacccctaggggcagcatatggacgtgcaggtcgtgaggagcatgggctccgaccccaccgcagtgccatctagagttcagtgtttgcagctcccgaagccccagggagcttatcggaaggataaggcagacctctggtctaatttctgtattccagggttcttgccctagtatgccggaaaaattggatcacacatgggcttggagaat-gagtgcaaggttttattgaatgtagctctcagcagatggatggggagccagaagggggatggagtgggaaggtggtctttccctggagttgggccactcagcggccgggttctcctccaactgcctttggctgaattccatgtcatccagccgtggatgacctgtcagcatctgtcggtgtgttcttctggctgtgtgttcctctcgaggtccagctgcttgtgtgtgtctacctgctaggtggggaagtggcgagccagagaggtcttggaaaatgcaacatttgggaacgaaaacagaaatgcttgtcctcacttagatccatgggcccaggctggagggtggaaccctcactagggaccatgcccttctctacgcagcacttccctgcccactcccatttca i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40819014 0 - 69331447 C e calJac3.chr1 198200869 0 + 210400635 C a score=1229746.000000 s hg38.chr22_KI270876v1_alt 35032 475 + 263666 TTAACGTATAACGTCAACAtttcaaaagtgctttaccaatctactttgccactagaagcctaagcgatttccagttttattgcatcctagtcaaccttgggcattCCCATGGTTTGTTTGTTT-AAAATCATTAGACAAAAATCATGTGACATTTCTGAGACATTAAGATTTTTGTTGTATTCT-----------------TTTTTTTT---TCTAATTCTCCAATATTGTAATTAGACAGCCAACTTTCCCGGAGCACTGTTATGTCTTTTCGGGCTGAGATGACTCAAGAAGAAATGTCCCTGATCCTTGTCCATCTCCAGGCTTGGGAGAAGGTTGTAAAGAAATGTGGCTTCGAAAGGTAAT-CTACGGAGGTGAGGTCTGGGGGAAGTCCccagaacctgagttccgtgagggca-gagaacaggctgttatgcttatggccacaatcccagcatccaaaacagtgtctgtcacagacccagcactcaatgag s panTro4.chr22 34413404 479 + 49737984 TTAACGTATAACGTCAACAtttcaaaagtgctttaccaatctactttgccactagaagtctaagcgatttccagttttattgcatcctagtcaaccttgggcattcccatggtttgtttgttt-AAAATCATTAGACAAAAATCATGTGACATTTCTGAGACATTAAGATTTTTGTTGTATTCTAAC-------------TTTTTTTTT---TCTAATTCTCCAATATTGTAATTAGACAGCCAACTTTCCCGGAGCACTGTTATGTCTTTTCGGGCTGAGATGACTCAAGAAGAAATGTCCCTGATCCTTGTCCATCTCCAGGCTTGGGAGAAGGTTGTAAAGAAATGTGGCTTCGAACGGTAAT-CTACGGAGGTGAGGTCTGGGGGAAGTCCccagaacctgagttccgtgagggca-gagaacaggctgttatgcttatggccacaatcccagcatccaaaacagtgtctgtcacagacccagcactcaatgag i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30826940 482 + 46535552 ttaacgtataatgtcaacatttcaaaagagttttaccaatctactttgccaccagaagcctaagtgatttccagttttattgcatcctagtcagccttgggcattcccatggtttgttcattt-aaaaccattAGACAAAAATCATGTGACATTTCTGAGACATTAAGATTTTTGTTGTATTCTAAC--------TTT--TTTTTTTTT---CCTAATTCTGCAATACTGTAATTAGACAGCCGACTTTCCCAGAGCACTGTTATGTCTTTTCGGGCTGAGATGACTCGAGAAGAAATGTCCCTGATCCTCGTCCATCTCCAGGCTTGGAAGAAGGCTGTGAATAAATGTGGCTTCAAAAGGTAAT-CTACGGAGGTGAGGTCTGGGGGAAGTCCccagaacctgagttccgtgagggca-gagaatgggctgttacgcttatggccacaatcccagcatccaaaacagtgtctgtcacagacccagcactcaatgag i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100381760 490 - 115148730 ttaatgtataatgtcaacatttcaaaagtgctttaccaatctactttgccaccagaagcctaagcgatttccagttttattgcatcctagtcagccttgggcattcccatggtttgttcattt-AAAATCATTAGACAAAAATCATGTGACATTTCTGAGACATTAAGAtttttgttgtattctaacttgtttttttt--ttttttttt---CCTACTTCTCCAATATTGTAATTAGACAGCCGACTTTCCCAGAGTGCTGTTATGTCTTTTCAGGCTGAGATGACTCGAGAATAAATGTCCCTGATCCTCGTCCATCTCCAGGCTTGGGAGAAGGTTGTAAAGAAACGTGGCTTCGAAAGGTAAT-CTACAGAGGTAAGGTCTGGGGGAAGTCCccagaacctgagttccgtgagggca-gagaacgggctgttacgcttatggccacaatcccagcatctaaaacagtgtctgtcacagacccagcactcaatgag i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80534420 479 + 95678458 ttaatgtataatgtcaacatttcaaaagtgctttaccaatctactttgccaccagaagcctaagagattttcagttttattgcatcctagtcagccttgggcattCCCATGGTTTGTTCGGTTAAAA---ATCAGACAAAAATCACGTGACATTTCTGAGACATTAAGATTTTTGTTGTATTCTAAC--------TTT--TTTTTTTTT----CTAATTCTCCAATATTGTAATTAGACAGCCGACTTTCCCGGAGCGCTGTTATGTCTTTTTGGACTGAGATAACTCAAGAAGAAATGTCCCTAATCTTCGTCCATCTCCAGGCTTGGGAGAAGGTTGTGAAGAAACGTGGCTTCCAAAGGTAAT-CTACGGAGGTGAGGTCTGGGGGAAGTCCTCagaacctgagttctgtaagggca-gagaacggactgttatgcttatggccacaatcccagcatctaaaacggtgtctggcacagacccggcactcaatgag i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80961402 479 - 96509753 ttaatgtataatgtcagcatttcaaaagtgctttaccaatctactttgccaccagaagcctaagagattttcagttttattgcatcctagtcagccttgggcattCCCATGGTTTGTTCGGTT-AAA---ATCAGACAGAAATCACGTGACATTTCTGAGACATTAAGATTTTTGTTGTATTCTAAC--------TTT--TTTTTTTTT---CCTAATTCTCCAATATTGTAATTAGACAGCCGACTTTCCCGGAGCGCTGTTATGTCTTTTTGGACTGAGATAACTCAAGAAGAAATGTCCCTAATCTTCGTCCATCTCCAGGCTTGGGAGAAGGTTGTGAAGAAACGTGGCTTCCAAAGGTAAT-CTACGGAGGTGAGGTCTGGGGGAAGTCCccagaacctgagttctgtaagggca-gagaacggactgttatgcttatggccacaatcccagcatctaaaacggtgtctggcacagacccggcactcaatgag i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76216847 456 + 90941950 TTAATGTATAATGTCAACA--------------------------TTGCCACCAGAAGCCTAagagattttcagttttattgcaTCCTAGTCAGCCTTGGGCATTCCCATGGTTTGTTCGGTT-AAACTCATTAGACAAAAATCATGTGACATTTCTGAGACATCAAGATTTTTGTTgtattctaac--------ttt--ttttttttt--tcctaattctccaaTATTGTAATTAGACAGCCGACTTTCCTGGAGCGCTGTTATGTCTTTTTGGACTGAGATGACTCAAGAAGAAATGTCCCTAATCTTCGTCCATCTCCAGGCTTGGGAGAAGGTTGTGAAGAAATGTGGCTTCCAAAGGTAAT-CTACGGAGGTGAGGTCCGGGGGAAGTCCCT-GAACCTGAGTTCCGTAAGGGCA-GAGAACGGACTGTTATGCTTATGGCCACAATCCCAGCATCTAAAACGGTGTCTGGCACAGACCTGGCACTCAATGag i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18483400 484 + 33263144 ttaatgtataatgtcaacatttcaaaagtgctttaccaatctactttgccaccagaagcctaagagattttcagttttattgcatcctagtcagccttgggcattCCCATGGTTTGTTCGGTT-AAAATCATTAGACAAAAATCATGTGACATTTCTGAGACATTAAGAtttttgttgtattctaac--------ttt--tttttttttttttCTAATTCTCCAATATTGTAATTAGACAGCCGACTTTCCCGGAGCGCTGTTATGTCTTTTTGGACTGAGATGACTCAAGAAGAAATGTCCCTAATCTTCGTCCATCTCCAGGCTTGGGAGAAGGTTGTGAAGAAATGTGGCTTCCAAAGGTAAT-CTACGGAGGTGAGGTCTGGGGGAAGTCCccagaacctgagttctgtaagggca-gagaacggactgttatgc-tatggccacaatcccagcatctaaaatggtgtctggcacagacccggcactcaatgag i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40819014 448 - 69331447 TTAACATGTAATATCACAATTTGAAAAGCCCTTCACTAATCTGCTTTGCCACTAGAAACCTAAGAGGTCACCAGTTT------------------------------CACCAATTGTTTGGTT-AAAATCATTAGGCCAAAAGGATGTGAAATTTTCCGGACATTAAGATTTTTTATGTATCCTAAC--------CTTGATTTTTTTTT--------ATCCCCAATGTTATAACTAGATAGTCCACTTTTGTGGCCCATCATCAAACATTTTCGGGACAATATGACTAGAGAAGAAATGCACTACATACTCTTTGATGCAAAGGCTTGGGAGATGCTGGTGCAGAGAAGTGGTCTGGACAGGTAATCCTAGAACGGTGATGTGGCGGGGAAATCCCCAGAACGTGCGAAc-gtgagggcaggagtttgggcagatgtgctcggggcccaaatcccagcctctagaatagcgtctggcacagacctgactcccagga-- i canFam3.chr10 C 0 C 0 e calJac3.chr1 198200869 0 + 210400635 C a score=738043.000000 s hg38.chr22_KI270876v1_alt 35507 314 + 263666 tatttgG---------------GttttgttttgttttgagacagagtctcttctctgttgcccaggttggagtgcagtggcacgatctcggctcactgcaacctctgcctcccaggttcaagtgattctcctgcctcagcctcacgagtagctgggattacaggcgcccgccaccacgcccggctaatttttatattttttgtagagatggagtttccccatgttggccaggctggtcttgaactcctgatctcaaatgctccacccgcctcggcctcccaatgtgctgggattagaggtgtgagccaccgtgcccagcTGTCAATAAG s panTro4.chr22 34413883 314 + 49737984 tatttgG---------------GttttgttttgttttgagacagagtctcttctctgttgcccaggttggagtgcagcggcatgatctcggctcactgcaacctctgcctcgcaggttcaagtgattctcctgcctcagcctcacgagtagctgggattacaggcgcctgccaccacgcccggctaatttttatattttttgtagagatggagtttccccatgttggccaggctggtcttgaactcctgatctcaaatgctccacccgcctcggcctcccaatgtgctgggattagaggtgtgagccaccgtgcccagcTGTCAATAAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30827422 314 + 46535552 tatttgG---------------GttttgttttgttttgagacagagtctcttctccgttgcccaggttggagtgcagcagcacgatctcggctcactgcaacctctgcctcctgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcacccgccaccatgcctggctaatttttatattttttgtaaagatggggtttcgccatgttggccaggctggtcttgaactcctgatctcaaatgctccacccaccttggcctcccaatgtgctgggattagaggtgtgagccactgcacccagctGTCAATAAG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100382250 323 - 115148730 tatttgG-----gttttgttttgttttgttttgttttgagacagagtctcttctctgttgccccggtttgagtgcagcggcacgatctcagctccctgcaacctctgcctcccaggttcaagtgattctcctgcctcagcctcctgagtagctgggattacaggtgcctgccaccacgcctggctaatttttatattttttgtagagatggagtttcgctatgttggccaggctggtcttgaactcctgacctcaaatgctccacctgcct-ggcctcccaatgtgctgggattacaggtgtgagccaccgcgcccagccGTCAATAAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80534899 319 + 95678458 tatttgG----------gttttgttttgttttgttttgagacagagtctcttttctgtcacccaggttggagtgcagtggcacgatctcagctcactacagcctctgcctccctggttcaagtgattctcctgcctcagcctcctgagtagctgggattacagacgcctgccaccacgcctggctaatttttatattgtttgtagagacggagttttgccatgttggccaggctggtcttgaactcatggcctcaaatgcttcacccgcctctgcctcccaatgtgctgggattacaggtgtgagccaccacgcctagcTGTCAGTGAG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80961881 319 - 96509753 tatttgG----------GTTTGGttttgttttgttttgagacagagtctcttctctgtcacccaggttggagtgcagtggcacgatctcagctcactacagcctctgcctccctggttcaagtgattctcctgcctcagcctcctgagtagctgggattacagacgcctgccaccacgccttgctaatttttatattgtttgtagagacggagttttgccatgttggccaggctggtcttgaactcatgacctcaaatgcttcacccacctcggcctcccaatgtgctgggattacaggtgtgagccaccacgcctagcTGTCAGTGAG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76217303 319 + 90941950 tatttgg----------gttttgttttgttttgttttgagacagagtctcttctccatcacccaggttggagtgcagtggcacaatctcagctcactgcagcctctgcctccctggttcaagtgattctcctgcctcagcctcctgagtagctgggattacagacgcctgccaccacgcctggctaatttttatattgtttgtagagacggagttttgccatgttggccaggctggtcttgaactcatgacctcaaatgctccacctacctcggcctcccaatgtgctgggattacaggtgtgagccaccacgcctagccgtCAATGAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18483884 329 + 33263144 tatttgggttttgttttgttttgttttgttttgttttgagacagagtctcttctctgtcacccaggttggagtgcagtggcaccatctcagctcactgcagcctctgcttccctggttcaagtgattctcctgcctaagcctcctgagtagctgggattacagacgcctgccaccacgcctggctaatttttatattgtttgtagagatggagttttgccatgttggccagtctggtcttgaactcatgacctcaaatgctccacctacctcggcctcccaatgtgctgggattacagatgtgagccaccacgcctagctgtcaatgag i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40819462 0 - 69331447 C e calJac3.chr1 198200869 0 + 210400635 C a score=132820.000000 s hg38.chr22_KI270876v1_alt 35821 45 + 263666 TATTTGAATGAAGGAATAAAATCTGATTGTTAATAT-CCAGAT------------CTG s panTro4.chr22 34414197 45 + 49737984 TATTTGAATGAAGGAATAAAATCTGATTGTTAATAT-ACAGAT------------CTG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30827736 45 + 46535552 TATTTGAATGAAGGAATAAAATCTGATTGTTAATAT-CCAGAT------------CTG i ponAbe2.chr22 C 0 M 371 s nomLeu3.chr7b 100382573 45 - 115148730 TATTTGAATGAAGGAATAAAATCTGATTGTTAACAT-CCAGAT------------CTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80535218 45 + 95678458 TATTTGAATGAAGGAATAAAATCTGATTGTTAATAT-CCAGAT------------CTG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80962200 45 - 96509753 TATTTGAATGAAGGAATAAAATCTGATTGTTAATAT-CCAGAT------------CTG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76217622 45 + 90941950 TatttgaatgaaggaataaaatcTGTTTGTTAATAT-CCAGAT------------CTG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18484213 45 + 33263144 tATTTGAATGAAGGAATAAAATCTGATTGTTAATAT-CCAGAT------------CTG i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40819462 58 - 69331447 tatttgaatgggggaaGGAAATCTGATTGTTAATATCCCAGATTCTGTTACTAGGCTG i canFam3.chr10 C 0 C 0 e calJac3.chr1 198200869 0 + 210400635 C a score=279602.000000 s hg38.chr22_KI270876v1_alt 35866 151 + 263666 TAGCCACCTTCAT--AGGATGAAACATACAAATGGGTTCCAACCAAGTTGGCTGAAGTGTTGCTCATGTTGTCTCATG----------TGCAATTGGAGATATGCAAAAAA--GATAAAATGTACACATCCGCATAAAAAA-TATCTTAGT-AAAAAAAATGTAAAA s panTro4.chr22 34414242 151 + 49737984 TAGCCACCTTCAT--AGGATGAAACATACAAATGGGTTCCAACCAAGTTGGCTGAAGTGTTGCTCATGTTGTCTCATG----------TGCAATTGGAGATATGCAAAAAA--GATAAAATGTACACATCGGCATAAAAAA-TATCTTAGT-AAAAAAAATGTAAAA i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100382618 153 - 115148730 TAGCCACCTTCAT--AGGATGAAACACACAAATGGGTTCCAAGCAAGTTGGCTGAAGTGTTGCTGATGTTGTCTCATG----------TGCAATTGGAGATATGCAAAAAAGGGAAAAAATGTACACATCCGCATAAAACA-TATCTTAGT-AAAAAAAATGTAAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80535263 152 + 95678458 TAGCCACCTTCAT--AGGATGAAAC-TACAAATGGTTTCCAACCAAGTTGGCTGACGCGTTGCTCATGTTGTCTCATG----------TGCAATTAGAGATATGCAAAAAAGGGGAAAAACGTACACATCCGCATAAAAAA--ATCTTAGTAAAAAAAAATGTAAAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80962245 152 - 96509753 TAGCCACCTTCAT--AGGATGAAAC-TACAAATGGTTTCCAACCAAGTTGGCTGACGCGTTGCTCATGTTGTCTCATG----------TGCAATTAGAGATATGCAAAAAAGGGGAAAAACGTACACATCCGCATAAAAAA--ATCTTAGTAAAAAAAAATGTAAAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76217667 155 + 90941950 TAGCCACCTTAATGAGGGATGAAAC-TACAAATGGGTTCCAACCAAGTTGGCTGACGCGTTGCTCATGTTGTCTCATG----------TGCAATTGGGGaaatgcaaaaaaggggaaaaacatacacatccgcataaaaaa-tatcttagtaaaaaaaaatgtaaaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18484258 153 + 33263144 TAGCCACCTTCAT--AGGATGAAAC-TACAAATGGGTTCCAACCAAGTTGGCTGACGCGTTGCTCATGTTGTCTCATG----------TGCAATTGGAGATATGCAAAAAAGGGGAAAAACGTACACATCCGCATAAAAAA-TATCTTAGTAAAAAAAAATGTAAAA i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40819520 151 - 69331447 TTGCCA-GTTGGT--AG---------GGCAAATGTGCTCCATCCAAGTTGGCTGAAGAGCTGGTCATGCTGTCTCGTGTACCGCCCTTTGCCATTGGAAATGGG---GTGGGGGGGAGGATTTACACATCCTCATAAAACATTTTCTTAGG-AAAGCAAATTTAAAA i canFam3.chr10 C 0 C 0 e calJac3.chr1 198200869 0 + 210400635 C e ponAbe2.chr22 30827781 371 + 46535552 M a score=523736.000000 s hg38.chr22_KI270876v1_alt 36017 308 + 263666 CCTTTCGTAAgggcaggcacggtggctcacgcttgaaatcctagcactttgggaggccaaggtgggcggatcgcttgaggtcaggagttcaaggacagattggccaacatggtgaaacgtcatttccactaaaaatacagaaattagctaggtgtggtggagcatgcctgtaatcccagctacatgggaggctgaggcaggagaattgcttgaacccgggaggcggaggttgcagtgagccaagattgcaccactactgcactctagcctgggcgacagagcagggcttcatt--------------------------------taaaaaaaaaaaa--------aT s panTro4.chr22 34414393 305 + 49737984 CCTTTGGTAAgggcaggcacggtggctcacgcttgaaatcctagcactttgggaggccaaggtgggcagatcgcttgaggtcagg--ttcaaggacagactggccaacatggtgaaacgtcatttccactaaaaatgcagaaattagctaggtgtggtggtgcatgcctgtaatcccagctacatgggaggctgaggcaggagaattgcttgaacccgggaggcggaggttgcagtgagccaagattgcaccactactgcactctagcctgggcgacagagcagggcttcatt--------------------------------taaaaaaaaaaaa---------T i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100382771 311 - 115148730 CCTTTGGTAAGAGcaggcacagtggctcacgcttgtaatcctagcactttgggaggccgaggtgggcggatcgcttgagttcaggagttcaagaccagactggccaacacggtgaaacctcttctcaaataaaaataga-aaattagttaggtgtggtggagcatgcctgtaaacccagctacatgggaggctgaggcaggagaattgcttgaacccaggacggggaggttgcagtgagccaagattgcaccactactgcactgtagcctgggcgacagagcaagacttcatt--------------------------------aaaaaaaaaaaaa----aaaaaT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80535415 314 + 95678458 CCTTTGGTAAGTGcaggcacggtggctcatgcttgtaatctcaggattttgggaggccgaggtgggcggatcacttgaggtcaggagttcaagaccagactggccaacctggtgaaaccttgtctctactaaaaatacagaaattagctaggtgtggaggagcatacctgtaatcccagctacatggggggctgaggcaggagaattgcttgaacccgtgaggcagaggttgcagtgagccaagatcgcaccgctactgcactctagcctgggcgacagagcaagacttcatc----------------------------------aaaaaaaaaaaaaaaaaaaaT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80962397 316 - 96509753 CCTTTGGTAAGTGcaggcacggtggctcatgcttgtaatctcagaattttgggaggccgaggtgggcggatcacttgaggtcaggagttccagaccagactggccaacctggtgaaaccttgtctctactaaaaatacagaaattagctaggtgtggtggagcatacctgtaatcccagctacatggggggctgaggcaggagaattgcttgaacccgtgaggcagaggttgcagtgagccaagattgcaccactactgcactctagcctgggcgacagagcaagacttcatc--------------------------------aaaaaaaaaaaaaaaaaaaaaaT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76217822 318 + 90941950 cctttGGTAAgtgcaggcacggtggctcatgcttgtaatcccagaattttgggaggccgaggtgggcggatcacttgaggtcaggagttcaagaccagactggccaacctggtgaaaccttgtctctactaaaaatacagaaattagctaggtgtggtggagcatgcctgtaatcccagctacatggggggctgaggcaggagaattgcttgaacccgtgaggcagaggttgcagtgagccaagatcgcaccactactgcactctagcctgggcgacagagcaagacttcatcaa------------------------------aaaaaaaaaaaaaaaaaaaaaat i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18484411 348 + 33263144 CCTTTGGTAAGTGcaggcacggtggctcatgcttgtaatcccagaattttgggaggctgaggtgggcggatcacttaaggtcaggagttcaagaccagactggccaacctggtgaaacctcgtctctactaaaaatacagaaattagctaggtgtggtggagcatgcctgtaatcccagctacatggggggctgaggcaggagaattgcttgaacccgtgaggcagaggttgcagcgagccaagatcgcaccactactgcactctagactgggcgacagagcaagacttcatcaaaaaaaaaaaaaaaaaaGGAGTGTCaaaatcaaaaaaaaaaaaaaaaaaaaaaT i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40819671 0 - 69331447 C e calJac3.chr1 198200869 0 + 210400635 C e ponAbe2.chr22 30827781 371 + 46535552 M a score=99366.000000 s hg38.chr22_KI270876v1_alt 36325 53 + 263666 CCTTTGGTAA-------TGGTAAGTACATTGGTATACTGATAGATGCCCAGACACATGGC s panTro4.chr22 34414698 53 + 49737984 CCTTTGGTAA-------TGGTAAGTACATTGGTATACTGATAGATGCCCAGACACATGGC i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100383082 53 - 115148730 CCTTTGGTAA-------TGGTAAGTACATTGGTACACTGATAGATGCCCAGACACATGGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80535729 52 + 95678458 CTTTTTGTAA-------TGGTAAGTACATT-GTATACGGATAGATGCCCAGACACATGAC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80962713 52 - 96509753 CTTTTGGTAA-------TGGTAAGTACATT-GTATACGGATAGATGCCCAGACACATGGC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76218140 52 + 90941950 cttttggtaA-------TGGTAAGTACATT-GTATACGGATAGATGCCCAGACACATGGC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18484759 52 + 33263144 CTTTTGGTAA-------TGGTAAGTACATT-GTATATGGATAGATGCCCAGACACATGGC i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40819671 52 - 69331447 CCTTTGATTAAAACCTTTGGTAAGCACATT--------AATAGGTGCCGAGGTCCCCGGC i canFam3.chr10 C 0 C 0 e calJac3.chr1 198200869 0 + 210400635 C e ponAbe2.chr22 30827781 371 + 46535552 M a score=1877658.000000 s hg38.chr22_KI270876v1_alt 36378 745 + 263666 TTAGAGGGCAATGGAATCCTAGAAGCAGAATTTGCTGGTTTTCTCCCAATCCAGGAATATTCCTTCCTGGGTCTGCCTTCACCCTTTCCCAACCCATGATAATGTCTGAGTCTTGCCTTGAGATCCAAGCTCCTGGGACTTCCCTTTCCGTTGCCTTGGCCTGGGCATTCAGACTCTCCCACAGAGCTCAGCTGCAACAATAGACTCAC---AACAAACTCTG----CTGCCTAACAGAGGCTGCACTTAACTCTTGCCAAAGTGTCCATAAGGTTCTCTAAAGTGGGTTGCAATGCTCCCGCAATTTATAGCAACCAAATGCCTAAAGATAAAATCTTCATGCGTCATGCAAATGG--GTTGCCTGCGCTTTCAGACACAGGTACAGTTA--TTGACTTCTCTGTGTCCTTGGCCCAGCCTCCCTCTACTGTTCTCTCTCCCACCTCCAC-TGTCAAGATTTCCCCCCAGTGCTCCCGTTAAGTCTGAGAAAGCTCCCCAAAAAAGGCATTGACTTTTCAGGCACAGGCACAGCCATTTTTCTTATCCGTGTCCTTGACTTTGGCTACTGGCCAATGCATGCTGCATGGACTGGAGTTAACAGGGGCCCTTCCTATGTGCTTGTACAATGTTAACCTCTCCTCCTTTGGTAAAGGAAAAGGGATGATTTTTCCTATCTTGGGGAAA-------ATCAGCCagtggttgaggcagactagaggcttcaggaaatggagtctccctc-tgtcgcccaggctggagt s panTro4.chr22 34414751 745 + 49737984 TTAGAGGGCAATGGAATCCTAGAAGCAGAATTTGCTGGTTTTCTCCCAATCCAGGAATATTCCTTCCTGGGTCTGCCTTCACCCTTTCCCAACCCATGATAATGTCTGAGTCTTGCCTTGAGATCCAAGCTCCTGGGACTTGCCTTTCCGTTGCCTTGGCCTGGGCATTCAGACTCTCCCACAGAGCTCAGCTGCAGCAATAGACTCAC---AACAAACTCTG----CTGCCTAACAGAGGCTGCACTTAACTCTTGCCAAAGTGTCCATAGGGTTCTCTAAAGTGGGCTGCAATGCTCCCGCAATTTATAGCAACCAAATGCCTAAAGATAAAATCTTCATGCGTCATGCAAATGG--GTTGCCTGCGCTTTCAGACACAGGTACAGTTA--TTGACTTCTCTGTGTCCTTGGCCCAGCCTCCCTCTACTGTACTCTCTCCCACCTCCAC-TGTCAAGATTTCCCCCCAGTGCTCCCGTTAAGTCTGAGAAAGCTCCCAAAAAAAGGCATTGACTTTTCAGGCACAGGCACAGCCATTTTTCTTATCCGTGTCCTTCACTTTGGCTACTGGCCAATGCATGCTGCATGGACTGGAGTTAACAGGGGCCCTTCCTATGTGCTTGTACCATGTTAACCTCTCCTCCTTTGGTAAAGGGAAAGGGATGATTTTTCCTATCTTGGGGAAA-------ATCAGCCAGTGGTTGAGGCAGACTAGAGGCTTCAGgaaatggagtctccctc-tgtcgcccaggctggagt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30828152 742 + 46535552 TTAGAGGGCAATGGAATCTTGGAAGCAGAA-TTGATGG-TTTCTCCCAATCCAGGAATATTCCTTCCTGGGT-TGCCTTCACCCTTTCCCAACCCATGACAATGTGTGAGTCTTGCCTTGAGATCCAAGCTCCTGGGATGTGCCTTTCCGTTGCCTTGGCCTGGGCATTCAGACGCTGCCACAGAGCTCGGCTGCAGCAATAGACTCAC---AACAGACTCTG----CTGCCTAACAGAGGCTGCACTTAACTCTTGCCAAAGTGTCCATAAGGTTCTCTAAAGTGGGTTGAAATGCTCCTGCAATTTATAGCAACCAAGTGCCTAAAGATAAAATCTTCATGCGTCATGCAAATGG--GTTGCCTGCACTTTCAGACACAGGTAGAGTTA--TTGACTTCTCTGTGTCCTTGGCCCAGTCTCCCTCTACTGTTCTCTCTCCCACCTCCAC-TGTCAAGATTTCCCCCCAATGCTCCCGTTAAGTCTGAGAAAGCTTCCAGAAAAAGGCATTGACTTTTCAGGCACAGGCATAGCCATTTTTCTTACCCGCGTCCTTGACTTTGGCTACTGGCCAATGCATGCTGCATGGACCAGACTTAACGGGGGCCCTTCCTATGTGCTTGTACAATGTTTACCTCTCCTCCTTTGGTAAAGGGAGAGGAATGATTTTTCCTATCTTGGGGAAA-------ATCAGCCAGTGGTTGAGGCAGACTAGAGGCTTCAGgaaatggagtctccctc-tgtcgcgcaggctggagt i ponAbe2.chr22 M 371 C 0 s nomLeu3.chr7b 100383135 741 - 115148730 TTAGAGGGCAATGGAATCCTAGAAGCAGAATTTGCTGGTTTTCTCCCAATCCAGGAATATTCCTTCCTGGGTCTGCCTTCACCCTTTCCCAACCCACGACAA----TGAGTCTTGCCTTGAGATCCAAGCTCCTGGGACGTGCCTCTCCGTTGCGTTGGCCTGGGCATTCAGACTCTCCCACAGGGCTCGGCTGCAGCAACAGACTCAC---AACAGACTCTG----CTGCCAAACAGAGGCTGCACTTAACTCTTGCCAAAGCGTCCATAAGGTGCTCTAAAGTGGGTTGCAATGCTCCCGCAATTTATAGCAACCAAGTGCCTAAAGATAAAATCTTCATGCGTCATGCAAATGG--GTTGCCTGCGCTTTCAGACACAGGTACAGTTA--GTGACTTCTCTGTGTCCTTGGCCCAGCCTCTCTCTACTGTTCTCTCTCCCACCTCCACTTGCCAAGATTTCCCCCCAGTGCTCCCGTTAAGTCTGAGAAAGCTCCT-AAAAAAGGCATTGACTTTTCAGGCACAGGCACAGCCGTTTTTCTTATCCGTGTCCTTGACTTTGGCTACTGGCCAATGCATGCTGCATGGACCAGAGTTAACGGGGGCCCTTCCTATGTGCTTGTACAATGTTTACCTCTCCTCCTTTGGTAAAGGGAGAGGGATGACTTTTCCTGTCTTGGGGAAA-------ATCAGCCAGTGGTTGAGACAGACTAGAGGCTTCAGgaaatggagtctccctc-tgtcgcccaggctggagt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80535781 745 + 95678458 TTAGAGGGCAATGGAATCCTAGAAGCAGAATTTGCTGGTTTTCTCCCAATCCAGGAATATTCCTTCCTGGGTCTGCCTTCACCCTTTCCCAACCCATGACAGTGTCTGAGTCTTGCCTTGAGATCCACGCTCCTGGGACGTGCCTTTCTATTGCCTTGGCCTGGGCGTTCAGACTCTCCCACAGAGCTCGGCTGCAGCAGTAGACTCAC---AACAGACTCTG----CTGCCTAACAGAGGCTGCACTTAACTCTTGCCAAAGTGTCCATAAGGTTCTCTAAAGTGGGTTGCAATGCTCCCGCAATTTATAGCAGCCAAGCACCTAAAGATAAAATCTTCATGCGTCATGCAAATGG--GTTGCCTGCGCTTTCAGGCACAGGTACAGTCA--TTCACTTCTCTGTGTCCTTGGCCCAACCTCCCTCTACTGTTCTCTCTCCCACCTCTGC-TGTCAAGATTTCCCCCTAAGGCTCTCGTTAAGTCTGGGAAAGCTCCC-AAAAAAGGCATTGACTTTTCAGGCACAGGCACAACCATTTTACTTATCCGTGTCCTTGACTTTGGCTACTGGCCGACGCATGCTGCATGGACCGGAGTTAACGGGGGCCCTTCCTATGTGCTTGTACAATGTTCACCTCTCCTCCTTTGGTAAAGGGAGAGGGATGATTTTTTGTATCTCGGGGAAA-------ATCAGCCAGTGGTTGAGGCAGACTAGAGGCTTCAGgagacggagtttccctcttgtcgcccagcctggagt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80962765 745 - 96509753 TTAGAGGGCAATGGAATCCTAGAAGCAGAATTTGCTGGTTTTCTCCCAATCCAGGAATATTCCTTCCTGGGTCTGCCTTCACCCTTTCCCAACCCATGACAGTGTCTGAGTCTTGCCTTGAGATCCAGGCTCCTGGGACGTGCCTTTCTATTGCCTTGGCCTGGGCGTTCAGACTCTCCCACAGAGCTCGGCTGCAGCAGTAGACTCAC---AACAGACTCTG----CTGCCTAACAGAGGCTGCACTTAACTCTTGCCAAAGTGTCCATAAGGTTCTCTAAAGTGGGTTGCAATGCTCCCGCAATTTATAGCAGCCAAGCGCCTAAAGATAAAATCTTCATGCGTCATGCAAATGG--GTTGCCTGCGCTTTCAGGCACAGGTACAGTCA--TTCACTTCTCTGTGTCCTTGGCCCAACCTCCCTCTACTGTTCTCTCTCCCACCTCTGC-TGTCAAGATTTCCCCCTAAGGCTCTCGTTAAGTCTGGGAAAGCTCCC-AAAAAAGGCATTGACTTTTCAGGCACAGGCACAACCATTTTACTTATCCGTGTCCTTGACTTTGGCTACTGGCCGACGCATGCTGCGTGGACCGGAGTTAACGGGGGCCCTTCCTATGTGCTTGTACAATGTTCACCTCTCCTCCTTTGGTAAAGGGAGAGGGATGATTTTTTGTATCTCGGGGAAA-------ATCAGCCAGTGGTTGAGGcagactagaggcttcaggagacggagtttccttcttgtcgcccagcctggagt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76218192 745 + 90941950 TTAGAGGGCAATGGAATCCTAGAAGCAGAATTTGCTAGTTTTCTCCCAATCCAGGAATATTCCTTCCTGGGTCTGCCTTCACCCTTTCCCAACCCATGACAGTGTCTGAGTCTTGCCTTGAGATCCAAGCTCCTGGGACGTGCCTTTCTATTGCCTTGGCCTGGGCGTTCAGACTCTCCCACAGAGCTTGGCTGCAGCAATAGACTCAC---AACAGACTCTG----CTGCCTAACAGAGGCTGCACTTAACTCTTGCCAAAGTGTCCATAAGGTTCTCTAAAGTGGGTTGCAATGCTCCTGCAATTTATAGCAGCCAAGCGCCTAAAGATAAAATCTTCATGCGTCATGCAAATGG--GTTGCCTGCGCTTTCAGGCACAGGTACAGTCA--TTCACTTCTCTGTGTCCTTGGCCCAACCTCCCTCTACTGTTCTCTCTCCCACCTCTGC-TGTCAAGATTTCTCCCTAAGGCTCTCGTTAAGTCTGGGAAAGCTCCC-AAAAAAGGCATTGACTTTTCAGGCACAGGCACAACCATTTTACTTATCCGTGTCCTTGACTTTGGCTACTGGCCGATGCATGCTGCGTGGACCGGAGTTAACGGGGGCCCTTCCTATGTGCTTGTACAATGTTCACCTCTCCGCCTTTGGTAAAGGGAGAGGGATGATTTTTTGTATCTCGGGGAAA-------ATCAGCCAGTGGTTGAGGCAGACTAGAGGCTTCAGGAggcggagtttccctcttgtcgcccagcctggagt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18484811 741 + 33263144 TTAGAGGGCAATGGAATCCTAGAAGCAGAATTTGCTGGTTTTCTCCCAATCCAGGAATATTTCTTCCTGGGTCTGCCTTCACCCTTTCCCAACCCATGACAA----TGAGTCTTGCCTTGAGATCCAAGGTCCTGGGACGTGCCTTTCTATTGCCTTGGCCTGGGCGTTCAGACTCTCCCACAGAGCTCGGCTGCAACAATAGACTCAC---AACAGACTCTG----CTGCCTAACAGAGGCTGCACTTAACTCTTGCCAAAGTGTCCATAAGGTTCTCTAAAGTGGGTTGCAATGCTCCCGCAATTTATAGCAGCCAAGTGCCTAAAGATAAAATCTTCATGCGTCATGCAAATGG--ATTGCTTGCGCTTTCAGGCACAGGTACAGTCA--TTCACTTCTCTGTGTCCTTGGCCCAGCCTCCCTCTACTGTTCTCTCTCCCACCTCTGC-TGTCAAGATTTCCCCCTAAGGCTCTTGTCAAGTCTGGGAAAGCTCCC-AAAAAGGGCATTGACTTTTCAAGCACAGGCACAACCATTTTACTTATCCGTGTCCTTGACTTTGGCTACTGGCCGACGCATGCTGCGTGGACCGGAGTTAACAGGGGCCCTTCCTATGTGCTTGTACAATGTTCACCTCTCCTCCTTTGGTAAAGGGAGAAGGATGATTTTTCGTATCTCGGGGAAA-------ATCAGCCAGTGGTTGAGGcaggctggaggcttcaggagacggagtttccctcttgtcgcccaggctggagt i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40819723 612 - 69331447 CTCTTGGCCGATGGATTCCTAGAAGCAGAAT----TGGTTTCCT---------------TTTCTCCCT--------------CCTTGCTCATGTCACCAGAACGT-TGAG----GCCTTGAGACCCAAACTCCTGGGACT--CCTCTTCACAGCCTCTGCCTGGGCATCTGGGGTCTCTGGTAGCGCCGGGCTGCAGCCTTCTACGGGCTGGGATGGAGCCTGCAGCCGGCCTAGCAGAG----------------GCCCAAGTGTCCGTAA-GTCCTACAAAATGAGCTGCAGGGCCTTC-------------CCCAAGCTCTTGGTGGTAAAATCTTCCTGAGACATGCAAACTGCAGTTGCCCACTCTTTTAGG-ACGGGAGCAGTCCATTCCACGCACCTCTGACCTAGGCCCAGCCCCCCCCCCCTTATC---CGCCCCTCTTCAC-TCGTCAGAGCCCCACTCAGTAATCC--------CCAGGATCGCTCAG-AACAAA---------------------------------------------GCCCCTCACCTTGGCTGCTGGTGGCTGAGCCCAACTTGGACCACCGTTGATTAGGCCGCTTCCACTGTGCCTGCACCCCGGCCGGTCTCCCCACTCTGGGGGAGGCAGAAAGGTGGTTTTCCCTTTCTCGAGGCAATAGTGACCTCAACCAGCAGGTGAGGCCAACTAGAGGCTTCTGGGAA------------------------GCTGGCGT i canFam3.chr10 C 0 C 0 e calJac3.chr1 198200869 0 + 210400635 C a score=555102.000000 s hg38.chr22_KI270876v1_alt 37123 244 + 263666 gcagtggcgcgatctcggctcactgcaacctctgcctcccaggttcacgtgattctcctgcctcagccttccgagtagctgggactacaggtgcccgccaccacacctggataatttttgtatttttagt--agacagggtttcaccacgttggccaggctggtctcgaactcctgacctcaagtgatttggctgcctaggcctcccaaagtgctgggattacaggcatgagccactgcgc----------------------------------------------------------------------------------------------ccggc s panTro4.chr22 34415496 244 + 49737984 gcagtggcgtgatctcggctcactgcaacctctgcctcccaggttcacgtgattctcctgcctcagccttccgagtagctgggactacaggtgcccgccaccacacctggataatttttgtatttttagt--agacagggtttcaccacgttggccaggctggtctcgaactcctgacctcaagtgatttgcctgcctaggcctcccaaagtgctgggattacaggcatgagccactgcac----------------------------------------------------------------------------------------------ctggc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30828894 246 + 46535552 gcagtggggcgagctcggctcactgcaacctctgcctcccaggttcacgtgattctcctgcctcagccttccgagtagctgggactacaggtgtccaccaccacacctggataatttttgtatttttagtggagacagggtttcaccacgttggccaggctggtctcgaactcctgacctcaagtgatttgcctgcctaggcctcccaaagtgctgggattacaggcatgagccactgtgc----------------------------------------------------------------------------------------------ccggc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100383876 246 - 115148730 gcagtggcgccatctcggctcactgcaacctctgcctcccaggttcacgtgattctcctgccttagccttccgagtagcagggactacaggtgcccgccaccacacctggataatttttgtatttttggtagagacaaggtttcaccatgttggccaggctggtctggaactcctgacctcaagtgatttgcctgtctaggcctcccaaagtgctgggattacaggcatgagccactgcgc----------------------------------------------------------------------------------------------ccggc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80536526 339 + 95678458 gcgatggtgcgatcttggctcactgcaacctctgcctcccaggttcatgcgattctcctgcctcagcctcccaagtagctgggattacaggtgcctaccaccacacctggataatttttgtatttttagtagcgatggggtttcaccatgttggtcaggctggtctcgaactcctgacctcaagtgatccgcccacctaggcctcccaaagtgctgggattacagac-tgagccactgcgcccggccCTAGGTTCTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNcctcccaaagtgctgggattacaggcttgagccaccacgcccggccGGC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80963510 245 - 96509753 gcgatggtgcgatcttggctcactgcaacctctgcctcccaggttcatgcgattctcctgcctcagcctcccaagtagctgggattacaggtgcctaccaccacacctggataatttttgtatttttagtagcgatggggtttcaccatgttggtcaggctggtctcgaactcctgacctcaagtgatccgcccacctaggcctcccaaagtgctgggattacagac-tgagccactgcgc----------------------------------------------------------------------------------------------ccggc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76218937 245 + 90941950 gcgatggtgcgatcttggctcactgcaacttctgcctcccaggttcacgcgattctcctgcctcagcctcccacgtagctgggattacaggtgcctaccaccacacctggataatttttgtatttttagtagcgacggggtttcactatgttggtcaggctggtctcgaactcctgacctcaagtgatccgcccacctaggcctcccaaagtgctgggattacaggc-tgagccactgcgc----------------------------------------------------------------------------------------------ccggc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18485552 245 + 33263144 gcgatggcgcaatctcggctcactgcaacctctgcctcccaggttcacgcgattctcctgcctcagcctcccaagtagctgggattacaggtgcctaccaccacacctggataatttttgtatttttagtagcgacggggtttcaccttgttggtcaggctggtctcgaactccagacctcaagtgatccgcccacctaggcctcccaaagtgctgggattacaggc-tgagccactgcgc----------------------------------------------------------------------------------------------ccagc i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40820335 0 - 69331447 C e calJac3.chr1 198200869 0 + 210400635 C a score=2105924.000000 s hg38.chr22_KI270876v1_alt 37367 812 + 263666 cctaggttcttaccctaactccaccactaactcaattgtaatcagggaatgtccctcctttttgg--agctggtttgcttctctgtaaataagggactgggctcattgatGGCAAAAATGTGGCAGAATACTATTTATCTTCTGTGTTGTGCCTAGAGGGCACCCACTAGGTCACAGCAGCACTCTTTCCCAAAGAGCCTAGATGTGTCACCGTGATTCTCCCGTGC------TTTAGACACCCTCACTAACAATAGCGGGGAGGT-TATGCCTCTTTGCCATCTGtgtacaaggcgacctggaagggccttccagctctaacatctcatagttctaAAACTTAGGTTGGAGAGGGGGCACTGAACTCCTAGGTTTACAGAGATGT-TCACCTTAAGCCCTGATGAAGTCTTTTCTTAAAAGAGTGACTTGAAGATGAGGAAGGATGTCAGAAGGCCCCTCCCGCTT-CCTCCAGGAGGGAGGAGGGAGGGACCCAG--GGCTGGTCCACTTGAGGCTGCTGATGGCCTTGGCTAAGGAGCAGAGGATTCTAAGGCTGTTGTCAACAGTTCCTTT---GAGGCCGTGGGGTTCCTTGGTCCAAGTACAGTTTGCCCAC-AGCCTTGCATCCTTTCCCATAGATCCTCTCTCACTATCCATCAAACCCAAGCCAAGTCTCTTGTAGATGCTCAATTAGGAGACAGGCCAGAACCAGCCTAAGGGATATACAAGTCA-----------AACCC-TGTTACGTGCTGTAGAAAGTCACACATACAGTC---CATAGTTCAGCAATACACACGCTGGAAACCCCAAATTCCATAAGAAAATGGTACTT s panTro4.chr22 34415740 813 + 49737984 cctaggttcttaccctaactccaccactaactcaattgtaatcagggaatgtccctcctttttgg--agctggttttctcctccataaataagggactgggctcattgatGGCAAAAATGTGGCAGAATACTATTTATCTTCTGTGTTGTGCCTAGAGGGCACCCACTAGGTCACAGCAGCACTCTTTCCCAAAGAGCCTAGATGTGTCACCGTGATTCTCCCGTGC------TTTAGACACCCTCACTAACAATAGCGGGGAGGT-TATGCCTCTTTGCCATCTGtgtacaaggcgacctggaagggccttccagctctaacatctcatagttctaAAACTTAGGTTGGAGAGGGGGCACTGAACTCCTAGGTTTACAGAGATGT-TCACCTTAAGCCCTGATGAAGTCTTTTCTTAAAAGAGTGACTTGAAGATGAGGAAGGATGTCAGAAGGCCCCTCCCGCTT-CCTCCAGGAGGGAGGAGGGAGGGACCCAG--GGCTGGTCCACTTGAGGCTGCTGATGGCCTTGGCTAAGGAGCAGAGGATTCTAAGTCTGTTGTCAACAGTTCCTTT---GAGGCCGTGGGGTTCCTTGGTCCAAGTACAGTTTGCCCAC-AGCCTTGCATCCTTTCCCATAGATCCTCTGTCACTATCCTTCAAACCCAAGCCAAGTCTCTTGTAGATGCTCAATTAGGAGACAGGCCAGAACCAGCCTAAGGGATATACAAGTCA-----------AACCCCTGTTACGTGCTGTAGAAAGTCACACATACAGTC---CATAGTTCAGCAATACCCATGCTGGAAACCCCAAATTCCATAAGAAAATGGTACTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30829140 811 + 46535552 cctaggttcttaccctaactccaccactaactcagttgtaatcagggaatgtctctcctttttgg--agctggtttgctcctctataaatgagggactgggctcattgatGGCAAAAATGTGGCAGATTACTATTTATGTTCTGTGTTGCGCCTAGAGGGCGCCCACTAGGTCACAGCAGCACTCTTTCCCAAAGAGCCTAGATGTGTCACCACAATTCTCTCGTGC------TTTAGACACCCTCACTAACAATAGCGGGAAGGT-TATGCCTCTTTGCCATCTGTGTACCAGGCAACCTGGAAGGGCCTTCCAGCTCTAACATCTCATAGTTCTAAAACTTAGGTTGGAGAGGGGGCACTGAACTCCTAGGTTTACAGAGATGT-TCACCTTAAGCCCTGATGAAGTCCTTTCTTAAAAGAGTGACTTAAAGATGAGGAAGGATGTCAGAAGGCCCCTCCCGCTT-CCCCCAGGAAGGAGGAGGGAGAGACCCAG--GGCTGGTCCACTTGAGGCTGCTGATGGCCTTGGCTAGGGAGCAGAGGATTCTAAGGCCGTTGTCAACAGTTCCTTT---GAGGTCTTGGGGTTCCTTGGTCCAAGTACAGTTTGCCCAC-AGCCTTGCATCCTTTCCCATAGATCCTCTCTCACTATCCATCAAACCCAAGCCAAGTCTGTTGTAGATGCTCAATTAGGAGACAGGCCAGAACCAGCCTAAGGGATATACAAGTCA-----------AACCC-TGTTACGTGCTGTAGAAAGTCACACATACAGTC---CATAGTTCAGCAATACCCACGCTGGAAACCCCAAATTCCATAAGAAAA-AGTACTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100384122 813 - 115148730 cctaggttcttaccctaactccaccactaactcaattgtaatcagggaatgtccctcctttttgg--agctggttttctcctctacaaatgagggactgggctcattgatGGCAAAAATGTGGCAGATTATTATTTATCTTCTGTGTTGCGCCTAGAGGGCGCCCACTAGGTCACAGCAGCACTCTTTGCCAAAGAGCCTAGATGTGTCATCGCGATTCTCCCGTGC------TTTAGACACCCTCACTAACAACAGTGGGGAGGT-TATGCCTCTTTGCCATCTGTGTACCAGGCGACCTGGAAGGGCCTTCCAGCTCTAACATCTCATAGTTCTAAAGCTTAGGTTGGAGAGGGGGCACTGAACTCCTAGGTTTACAGAGATGT-TCACCTTAAGCCCTGATGAAGTCCTTTCTTAAAAGAGTGACTTGAAGATGAGGAAGGATGTCAGAAGGCCCCTCCCACTTCCCCCCAGGAGGGAGGAGGGAGGGACCCAG--GGCTGGTCCACTTGAGGCTGCTGATGACCTTGGCTAGGGAGCAGAGGATTCTAAGGCCATTGTCAACAGTTCCTTT---GAGGCCTTGGGGTTCCTTGGTCCAAGTACAGTTTGCCCAC-AGCCTTGCATCCTTTCCCATAGATCCTCTCTCACTATCCATCAAACCCAAGCCAAGTCTATTGTAGATGCTCAATTAGGAGACAGGCCAGAACCAACCTAAGGGACATACAAGTCA-----------AACCC-TGTTACGTGCTGTAGAAAGTCACACATACAGTC---CATAGTCCAGCAATACCCACGCTGGAAACCCCAAATTCCATAAGAAAAAGGTACTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80536865 809 + 95678458 cctaggttcttagcctaactccaccactaactcagttgtaatcagggaatgtccctcctttttgg--agccggtttgctcctctgtaaatgagggactgggctCATTgatggcaaaaatgtggcagatgactgtttatcttctgtgttgcgcctagacggcgcccactaggtcacagcagcactctttcccaaagagcctagatgcggcaccgcgattctcctgtgc------tttagacaccctcactaacaatAGCGGGGAGGT-TATGCCTC--TGCCATCTGtgtaccaggcgacctggaaggg-cttccagctctaacatctcatagttctaAAACTTAGGTTGGAGAGGGGGCACTGAAACCCTAGGTTTACAGAGATGT-TCACTTTAAACCCCGATGAAGTCCTTTCTTAAAAGAGTGACTTGAAGACGAGGAAGGATGTCAGAAGGCCCCTCCCGCTT-CCCCCAGGAGGGAGGAGGGAGGGACCCAG--GGCTGGTCCACTTGAGGCTGCTAATGGCCTTGGCTAGGGAGCAGAGGATTCTAAGTCCATTGTCCACAGTTCCTTT---CAGGCCTTGGGCTTCCTTGGTCCAAGTACAGTTTGCCCAC-AGCCTTGCATCCTTTCCCATAGACCCTCTCTCACTATCCATCAAACCCAAGCCAAGTCTATTGTAGATGCTCCATTAGGAGACAGGCCAGAAGCAACCTAGGGAACATGCAAGTCA-----------GACCG-TGTTACGTGCTGTAGAAAGTCACACACACAGTC---CATAGTCCAGCAATACCCACGCTGGGAGCCCCAAATTCCATAAGATAAAGGTTCTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80963755 809 - 96509753 cctaggttcttagcctaactccaccactaactcagttgtaatcagggaatgtccctcctttttgg--agccggtttgctcctctgtaaatgagggactgggctcattgatGGCAAAAATGTGGCAGATGACTGTTTATCTTCTGTGTTGCGCCTAGACGGCGCCCACTAGGTCACAGCAGCACTCTTTCCCAAAGAGCCTAGATGCGGCACCGCGATTCTCCTGTGC------TTTAGACACCCTCACTAACAATAGCGGGGAGGT-TATGCCTC--TGCCATCTGTGTACCAGGCGACCTGGAAGGG-CTTCCAGCTCTAACATCTCATAGTTCTAAAACTTAGGTTGGAGAGGGGGCACTGAAACCCTAGGTTTACAGAGATGT-TCACTTTAAACCCCGATGAAGTCCTTTCTTAAAAGAGTGACTTGAAGACGAGGAAGGATGTCAGAAGGCCCCTCCCGCTT-CCCCCAGGAGGGAGGAGGGAGGGACCCAG--GGCTGGTCCACTTGAGGCTGCTAATGGCCTTGGCTAGGGAGCAGAGGATTCTAAGTCCATTGTCCACAGTTCCTTT---CAGGCCTTGGGGTTCCTTGGTCCAAGTACAGTTTGCCCAC-AGCCTTGCATCCTTTCCCATAGACCCTCTCTCACTATCCATCAAACCCAAGCCAAGTCTATTGTAGATGCTCCATTAGGAGACAGGCCAGAACCAACCTAGGGAACATACAAGTCA-----------GACCG-TGTTACGTGCTGTAGAAAGTCACACACACAGTC---CATAGTCCAGCAATACCCACGCTGGGAGCCCCAAATTCCGTAAGATAAAGGTTCTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76219182 809 + 90941950 cctaggTTCTTAGCCTAACTCCACCACTAACTCAGTTGTAATCAGGGAACGTCCCTCCTTTTTGG--AGCCGGTTTGCTCCTCTGTAAATGAGGGACTGGGCTCATTGATGGCAAAAATGTGGCAGATGACTGTTTATCTTCTGTGTTGTGCCTAGACGGTGCCCACTAGGTCACAGCAGCACTCTTTCCCAAAGAGCCTAGATGCGGCACCGCGATTCTCCTGTGC------TTTAGACACCCTCACTAACAATAGCAGGGAGGT-TATGCCTC--TGCCATCTGTGTACCAGGCGACCTGGAAGGG-CTTCCAGCTCTAACATCTCATAGTTCTAAAACTTAGGTTGGAGAGGGGGCACTGAAATCCTAGGTTTACATAGATGT-TCACTTTAAACCCCGATGAAGTCCTTTCTTAAAAGAGTGACTTGAAGACGAGGAAGGATGTCAGAAGGCCCCTCCCGCTT-cccccaggagggaggagggagggaccCAG--GGCTGGTCCACTTGAGGCTGCTAATGGCCTTGGCTAGGGAGCAGAGGATTCTAAGTCCATTGTCCACAGTTCCTTT---CAGGCCTTGGGGTTCCTTGGTCCAAGTACGGTTTGCCCAC-AGCCTTGCATCCTTTCCCATAGACCCTCTCTCACTATCCATCAAACCCAAGTCAAGTCTATTGTAGATGTTCCATTAGGAGACAGGCCAGAACCAACCTAGGGAACATACAAGTCA-----------GACCG-TGTTACGTGCTGTAGAAAGTCACACACACAGTC---CATAGTCCAGCAATACCCACGCTGGGAGTCCCAAATTCCATAAGataaaggttctt i papAnu2.chr10 C 0 I 300 s chlSab2.chr19 18485797 804 + 33263144 cctaggttcttagcctaaccccgccactaactcaattgttatcagggaatgtccctcctttttgg--agccggtttactcctctgtaaatgagggactgggctcattgatGGCAAAAATGTGGCAGATTACTGTTTATCTTCTGTGTTGCGCCTAGACGGCGCCCACTAGGTCACAGCATCACTCTTTCCCAAAGAGCCTAGATGCGGCACTGTGATTCTCCTGTGC------TTTAGACACCCTCACTAACAATAGCGGGGAGGT-TATGCCTC--TGCCATCTGtgtaccaggtgacctggaaggg-cttccagctctaacatctcatagttctaAAACTTAGGTTGGAGAGGGGGCACTGAAATCCTAGGTTTACAGAGATGT-TCACTTTAAACCCCGATGAAGTCCTTTCTTAAAAGAGTGACTTGAAGACGAGGAAGGATGTCAGAAGGCCCCTCCCGCTT-CCCCCAGGAGGGAGGAGGGAGGGACCCAG--GGCTGGTCCACTTGAGGCTGCTAATGGCCTTGGCTAGGGAGCAGAGGATTCTAAGTCCATTGTCCACAGTTCCTTT---CAGACCTTGGGGTTCCTTAGTCCAAGTACGGTTTGCCCAC-AGCCTTGCATCCTTTCCCATAGACCCTCTCTCACTATCCATCAAACCCAAGCCAAGTCTGTTGTAGATGCTCCAGTAGGAGACAGGCCAGAACCAACCTAGGGAACATACAAGTCA-----------GACCG-TGTTACGTGCTGTAGAAAGTCACACACA--------CATAGTCCAGCAATACCCACGGTGGGAGTCCCAAATTCCGTAAGATAAAGGTTCTT i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40820335 777 - 69331447 CCTGTGCTCTTACCCTGCTTCCATCACACACTGGATCGTCTCGTAGGAGAGTCCCCTCACCCAGGGAGGCCAGCGGCCTGCCCAGT-GACGGAGGCTTGGGCCCACTGACGGAGCACAGGTGGCAGCTGGCCACTGGCCTTCT-CGGTGGACCTGCAGGGAGCATCACGGGTCAATGCAGCATTCGTTCTC--AGAGCCCAGATATGT-GTCGAGATGCTCCTGTGAAAGCAGTCTGGCCACTCTC-CCAGCTATGGCAGGGGCCTGGACGCCTCTTCGCCACCTCTGC-CCAGATGAGCTGGGGAGC-CTTCTGCTTCTAAC----------TCTAAGATTTGGGTTGGAGGTGGG---CTGAACTTTTGGG-TTATGGAGATGTCCCAAAGAAAACTCTAAGTAAGTCTTTGTT--AAAGAGCAACGTGGTGACAGGGAAGGATATCCGAGGCCTCCTGCCACTT-CCCT------------GGACGGGGGTCAGTTGGCTGGTCCACCTGAGGCTGCTGATGGCCTTGCTCAGGGAGCAGAGGACTC--AAGCCATTGTCAACAATTCCTTTTTGGATGCCTTGGGGCTGCTTGGCCTTGGTGTGGTTTTCCCATGAGCCCTGCCGTCTTTGCCAAAG-------CCCAGTATCCCTGGAGCCTGTGCCTGGTCTGCGGTAGGTACTCAAGTTG--GACAGACCGGAACACACCTAAGGGTCATACAAATCATACAAAACAGGGATTC-TGTTTTGTGCTGTCGGCCTCTGGTTACAGCGTCCCGCATGGCCCACTTGTGTCCACTTGGGAAGCCCCCAATCC------------------ i canFam3.chr10 C 0 C 0 e calJac3.chr1 198200869 0 + 210400635 C a score=588712.000000 s hg38.chr22_KI270876v1_alt 38179 303 + 263666 AAGAAcagtgattctcaaaggt----cttgcagaactctgaagttccagatactgagccaaaatgattcaacaggaaaattga---atggtgattcttttttcgaactacaggaaaagtttgag----tggagaggattttcccagttgtgccttttttcccttttcctcactttttcttaagatttacaagctccccccacttgcctgttaacaagcgGCCAGAGTAGATCTCACTATT-TCTAAGTGTGACCACACTTTTGTTAAAAATCTACTTTGggttgggcgtgatggctcatgccagtaatcccaaaa s panTro4.chr22 34416553 303 + 49737984 AAGAAcagtgattctcaaaggt----cttgcagaactctgaagttccagatactgagccaaaatgattcaacaggaaaattga---atggtgattcttttttcgaactacgggaaaagtttgag----tggagaggattttcccagttgtgccttttttcccttttcctcactttttcttaagatttacaagctccccccacttgcctgttaacaagtgGCCAGAGTAGATCTCACTATT-TCTAAGTGTGACCACACTTTTGTTAAAAATCTACTTTGggttgggcgtgatggctcatgccagtaatcccaaaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30829951 302 + 46535552 AAGAAcagtgattctcaaaggt----cttgcagaactctgaagttccagatactgagccaaaatgattcaacaggaaaattga---agggtgattcttttttcaaattacaggaaaagtttgag----tggagagaattttcccagttgtgcctttttt-ccttttcctcgctttttcttaagatttacaagctccccccacttgcctgttagcaagtgGCCAGAATAGATCTCACTATT-TCTAAGTGTGACCACACTTTTGTTAAAAATCTACTTTGggtcgggcgcagtggctcatgccagtaatcccaaaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100384935 303 - 115148730 AAGAAcagtgattctcaaaggt----cttgcagaactctgaagttccagatactgagccaaaatgattcaacaggaaaattga---atggtgattcttttttcaaattacaggaaaagtttgag----tggagagaattttcccagttgtgccttttttcccttttcctcgctttttcttaagatttacaagctccccccacttgcctgttaacaagtgGCCAAAGGAGATCTCACTATTAACTAAGTGTGACCACACTTTCGTTAAAAATCTACTTTGggtcgagcgcactggttcatgccagtaat-ccagta i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80537674 303 + 95678458 AAGAAcagtggttctcaaaggt----cctgcataaccctgaagttccagatactgagccaaaatgattcaacaggaaaactga---atggtgattcttttttaaaattacaggaaaggtttgag----tggagagaattttcccagttgtgccttttttcccttttcctcattttttcttaagatttacaagcttcagtcacttgcccgttaacaagtggtcagagtagatCTCACTATT-TCTAAGTATGACCACACTTTTGTTAGAAGTCTACTTTGggccgggcgcggtggctcatacctgtaatctcaaaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80964564 303 - 96509753 AAGAAcagtggttctcaaaggt----cctgcataaccctgaagttccagatactgagccaaaatgattcaacaggaaaactga---atggtgattcttttttaaaattacaggaaaggtttgag----tggagagaattttcccagttgtgccttttttcccttttcctcattttttcttaagatttacaagcttcagtcacttgcccgttaacaagtggtcagagtagatCTCACTATT-TCTAAGTATGACCACACTTTTGTTAGAAGTCTACTTTGggccgggcgcggtggctcatacctgtaatctcaaaa i macFas5.chr10 C 0 C 0 s chlSab2.chr19 18486601 299 + 33263144 AAGAAcagtgattctcaaaggt----cctgcataactctgaagttccagatactgagccaaaatgattcaacaggaaaactga---atggcgattcttttttaaaattacaggaaaagtt--------tggagagaattttcccagttgtgccttttttcccttttcctcattttttcttaaGATTTACAAGCTTCAGTCACTTGCCCGTTAACAAGTGGCCGGAGTAGATCTCACTGTT-TCTAAGTATGACCACACTTTTGTTAAAAGTCTACTTTGggccgggcgcagtggctcatacctgtaatcccaaaa i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40821112 275 - 69331447 ---AGcagtgattctgaaacatagtgcttgtggaactctgctgttccaggagctagaccaaactgattccgcaggaaaatggaatgatggtggtcttttctccaaaatgtaagagacatttgagttaatggggggaattttctgagttgtacatttttccattcttcatcagttcttctgaaga-ctacctgcttctcccacttgtctgTGAAAA--------GAGTAGAAGCTGCTGTG-TCTAAGCATGAC--CACTCTTGTTAGAAATCCACTTTCAGT-------------------------TTCCAAAA i canFam3.chr10 C 0 I 88 e calJac3.chr1 198200869 0 + 210400635 C e papAnu2.chr10 76219991 300 + 90941950 I a score=280105.000000 s hg38.chr22_KI270876v1_alt 38482 157 + 263666 ctttgggaggccgaggggaggtgaatcacttgaggtcaggagttggagagcagcctggccaacatggcaaaaccctgtcgctactaaaaacacaaaaattagcccgacatggtggtgcatcatgcccggctactcgggaggctgaggcagaagaatg s panTro4.chr22 34416856 157 + 49737984 ctttgggaggccgaggggaggtggatcacttgaggtcaggagttcgagagcagcctggccaacatggcaaaaccctatcgctactaaaaacacaaaaattagcccgacatggtggtgtatcatgcccggctactcgggaggctgaggcagaagaatg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30830253 157 + 46535552 ctttgggaggccgaggggaggtggatcacttgaggtcaggagcttgagaccagcctggccaacatggcaaaactctgtcgctactaaaaatacaaaaattagcccgacatggtgttgcatcatgcctggctactcgggaggctgaggcagaagaatg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100385238 157 - 115148730 ctttgggaggccgaggggaggtggatcacttgaggttaggagttcgagaccagcctggccaacgtggtaaaaccctgtctctactaaaaacacaaaaattagcccaacatagtggtgcatcatgcccggctactcaagaggctgaggcagaagaatg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80537977 157 + 95678458 ctttgggaggccgagagggggtggatcacttgaggtcaggagttcgagaccagcctggccaacatggcaaaaccctgtctctactaaaaatacagaaattagcccagcatggtggtgcctcatgcctgactacttgggaggctgaggcaggagaatg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80964867 157 - 96509753 ctttgggaggccgagagggggtggatcacttgaggtcaggagttcgagaccagcctggccaacatggcaaaaccctgtctctactaaaaatacagaaattagcccagcatggtggtgcctcatgcctgactacttgggaggctgaggcaggagaatg i macFas5.chr10 C 0 C 0 s chlSab2.chr19 18486900 157 + 33263144 ctttgggaggccgagagggggtggatcacttgaggtcaggagttcgagaccagcctggccaacatggcaaaaccctgtctctacaaaaaatacaaaaattaccccggcatggtggtgcctcatgcctggctactcgggaggctgaggcaggagaatg i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40821387 88 - 69331447 I e calJac3.chr1 198200869 0 + 210400635 C e papAnu2.chr10 76219991 300 + 90941950 I a score=375291.000000 s hg38.chr22_KI270876v1_alt 38639 224 + 263666 gcttgaactctggaggcggaggttgc-------agtgagccgagatcgcgccactgcactcc----------agcccgggcaatagagtgagactccatctcaaaacaaac-aaaaaaaTTCTACTTTGTTTTCAAAATATTCAACACTGTCCCACTGAATGACAGTGAGCCCTCTCCCGTGGA----------------AGGGGGATTTGTGGTTGTCTTCTTGGAGA--TCCCCAAACTTTTGCTTTGGAAATGTAGA s panTro4.chr22 34417013 224 + 49737984 gcttgaactctggaggcggaggttgc-------agtgagccgagatcgcgccactgcactcc----------agcccgggcaatagagtgagactccatctcaaaacaaac-aaaaaaaTTCTACTTTGTTTTCAAAATATTCAACACTGTCCCACTGAATGACAGTGAGCCCCCTCCCGTGGA----------------AGGGGGATTTGTGGTTGTCTTCTTGGAGA--TCCCCAAACTTTTGCTTTGGAAATGTAGA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30830410 225 + 46535552 acttgaactctggaggcggaggtggc-------agtgagccgagatagcaccgctgcactcc----------agcccaggcaatagagtgagactccatctcaaaacaaacaaaaaaaaaTCTACTTTGTTTTCCAAATATTCAACACTGTCCCACTGAATGACAGTGAGCCCTGTCCCGTGGA----------------AGGGGGATATGTGGTTGTCTTCTTGGAGA--TCCCCAAACTTTTGCTTTGGAAATGTAGA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100385395 222 - 115148730 gctagaactctggaggcggaggttgc-------agtgagccgagatcgcacctctgcactcc----------agccccggcaataga--gagactccatctcaaaacaaac-aaaaaTAATCTACTTTGTTTTCAAAATATTCAACACTGTCCCACTGAATGACAGTGAGCCCTCTCCCATGGA----------------AGGGGGATTTGTGGTTGTCTTCTTGGAGA--TCCCCAAACTTTTGCTTTGGAAATATAGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80538134 222 + 95678458 gcttgaactc--gaggcagaggttgc-------agtgagccgagatcgcgccgctgcactct----------agcctggacaatagagtgagactccgtctcaaaacaaac-aaaaaaaaTCTACTTTGTTTTCAAAATATTCAACACTGTCCAACTGAACGACAGTGAGCCCTCTCCCGTGGA----------------AGGGGGATATGTGGTTGTCTTCTTGGAGA--TCCCCAAACTTTTGCTTTGGAAATGTAGA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80965024 218 - 96509753 gcttgaactc--gaggcagaggttgc-------agtgagccgagatcgcgccgctgcactct----------agcctggacaatagagtgagactccgtctca----aaac-aaaaaaaaTCTACTTTGTTTTCAAAATATTCAACACTGTCCAACTGAACGACAGTGAGCCCTCTCCCGTGGA----------------AGGGGGATATGTGGTTGTCTTCTTGGAGA--TCCCCAAACTTTTGCTTTGGAAATGTAGA i macFas5.chr10 C 0 C 0 s chlSab2.chr19 18487057 217 + 33263144 gcttgaactc--gaggcagaggttgc-------agtgagccgagatcgcgccgctgcactct----------agcctggacaatagagtgagactccgtctc-----aaac-aaaaaaaaTCTACTTTGTTTTCAAAATATTCAACACTGTCCAACTGAATGACAGTTAGCCCTCTCCCGTGGA----------------AGGGGGATATGTGGTTGTCTTCTTGGAGA--TCCCCAAACTTTTGCTTTGGAAATGTAGA i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40821475 228 - 69331447 CCTTTTTCTTTGGAAGTGTAGGTTACTTTTGTTAATTTTCTGAATTAATTCTAATACACACCCATGATACAAAACCTCAAAGGAACAGAGAGGC-------------AAAC-AGTAAAAAGGAAATCTCCCTCAAAGCTTTTCCCCGCTCCCC---------------AGCTCTTTTCCACAGAAGCAACCACAATTTCCAGGTGGATCCACCCCTGCCtttttaaaaagttttttaaagattta-tttatttattta-- i canFam3.chr10 I 88 C 0 e calJac3.chr1 198200869 0 + 210400635 C e papAnu2.chr10 76219991 300 + 90941950 I a score=601481.000000 s hg38.chr22_KI270876v1_alt 38863 279 + 263666 CTCTtttactaatttttaaaaattatcatacatgcatttgacacaaaagttaagaggaacaaaagggcaaatagt--aaaaagtaagtgtcgctaggtgtggttgcatgcgcctgtagtcccagctgctggagaagatgacttgaacccaggagttcgaggccagcctgggcaatatagtgaggccctgtctcaaaaaaaaaaaaaaaaa---tgggtctccttaaatcctgtttcccgatgtcccaggttccctgcccagaagcaaccaCAATTTTCAAGCAA s panTro4.chr22 34417237 276 + 49737984 CTCTtttactaatttttaaaaattatcatacatgcatttgacacaaaagttaagaggaacaaaagggcaaatagt--aaaacgtaagtgtcgctaggtgtggttgcatgcacctgtagtcccagctgctggagaagatgacttgaacccaggagtttgaggccagcctgggcaatatagtgaggccccgtctcaaaaaaaaaaaaaa------tgggtctccttaaatcctgtttcccgatgtcccaggttccctgcccagaagcaaccaCAATTTTCAAGCAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30830635 262 + 46535552 CTCttttattaatttttaaaaattatCATACATGCATTTGACACAA-----AAGAGGAACGAAAGGGCAAATAGT--AAAAAGTGAGTGTCgctaggtgtggttgcatgcgcctgtagtcccagctgctggagatgatcacttgaacccaggagtttgaggccagcctgggcaatatagtgaggccccgtctcaaaaaaaaaaaaa-------TGAGTCTCCTTAAATCCTGTTTCCCGATGTCCCAGGTTCCCTGCCCAGAAGCAACCACCtttt-------- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100385617 280 - 115148730 --CTtttattaatttttaaaaattctcatacatgcatttgacacaaaagttaagaggaacaaaagggcaaatagt--aaaaaataagtgtcgctaggtgtggttgcatgttcctgtagtcccagctgctggagaagatcacttgaacccaggagtttgaggccagcctgggcaatatagtgaggccctgtctcaaaaaaaaaaaaaaaaaaagagtctctccttaaatcctgtttcccaatgtcccagattccctgcccagaagcaaccaCAATTTTCAAGCAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80538356 276 + 95678458 CTCTTTTACTAATTTTTAAAAATGATCATACATGCATATGACACAAAAGCTAAGAGGAACAAAAGGGCAAACAGT---AAAAGTAAGTGTCACTAggtgtggttgcatgtgcctgtagtcccagctgctggggagcatcacttgaacccaggagtttgaggccagcctgggcaatatagtgagaccccgtctcaaaaacaaaaaaaa-----gaGTCTCCCCTTAAATCCTATTTCCAGATGTCCCAGGTTCCCTGCCCAGAAGCAACCACAATTTACAAGCAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80965242 277 - 96509753 CTCTtttactaatttttaaaaatgatcatacatgcatatgacacaaaagctaagaggaacaaaagggcaaacagt--aaaaagtAAGTGTCACTAggtgtggttgcatgtgcctgtagtcccagctgctggggagcatcacttgaacccaggagtttgaggccagcctgggcaatatagtgagaccccgtctcaaaaacaaaaaaaa-----gaGTCTCCCCTTAAATCCTATTTCCAGATGTCCCAGGTTCCCTGCCCAGAAGCAACCACAATTTACAAGCAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76220291 275 + 90941950 ctcttttaccaatttttaaaaatgatcatacATGCATATGACACAAAAGCTAAGAGGAACAAAAGGGCAAACAGT--AAAAAGTAAGTGTCACTAGgtgtggttgcatgtgcctgtagtcccagctgctggggagcatcacttgaacccaggagtttgaggccagcctgggcaatacagtgagaccccgtctcaagaacaaaaaaa-------agtctcCCCTTAAATCCTGTTTCCGGATGTCCCAGGTTCCCTGCGCAGAAGCAACCACAATTTTCAagcaa i papAnu2.chr10 I 300 C 0 s chlSab2.chr19 18487274 277 + 33263144 CTCTTTTACTAATTTTTAAAAATGATCATACATGCATATGACACAAAAGCTAAGAGGAACAAAAGGGCaaatagt--aaaaagtaagtgtcactaggtgtggttgcatgtgcctgtagtcccagctgct-gggagcatcacttgaacccaggagtttgaggccagcctgggcaatatagtgagaccctgtctcaaaaaaaaaaaaaa----TGAGTCTCCCCTTAAATCCTATTTCCGGATGTCCCAGGTTCCCTGCCCAGAAGCAACCACAATTTTCAAGCAA i chlSab2.chr19 C 0 I 23 s canFam3.chr10 40821703 190 - 69331447 tttatttatttatttatttatttattcatttatttattagacacata----gagagaggcagagacacaggcagagggagaagcgggctcctcgaggggag----------------------cctgatgaggg-----actcgatcccaggaccttgggatc------------------atgccctgagccgaaggcaga-----------------tgctcaaccactgagcca------cccagg-----cgccccCAAACAG----------------- i canFam3.chr10 C 0 C 0 e calJac3.chr1 198200869 0 + 210400635 C a score=4974.000000 s hg38.chr22_KI270876v1_alt 39142 15 + 263666 CCACCTTTTTTTTTT s panTro4.chr22 34417513 15 + 49737984 CCACCTTTTTTTTTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30830897 10 + 46535552 -----tttttttttt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100385897 15 - 115148730 CCGCCTTTTTTTTTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80538632 13 + 95678458 --ACATGTTTTTAAA i rheMac3.chr10 C 0 I 42 s macFas5.chr10 80965519 11 - 96509753 --ACATGTTTTTa-- i macFas5.chr10 C 0 I 8 s papAnu2.chr10 76220566 13 + 90941950 --acatgttttttaa i papAnu2.chr10 C 0 I 16 s canFam3.chr10 40821893 10 - 69331447 --ATCCCCTTTT--- i canFam3.chr10 C 0 C 0 e calJac3.chr1 198200869 0 + 210400635 C e chlSab2.chr19 18487551 23 + 33263144 I a score=492700.000000 s hg38.chr22_KI270876v1_alt 39157 201 + 263666 TTT---AAAGAAAAAGAAAGAAGATCAAAGCATCTGCTCCATACACTCTTGGTACTGTTTTTTAATCAAATTGGTGACAACTTGTtatatatgtatacattataaatgta--tgcatgtatgtatatctttattaggaaaagacttggtgaccaaagtcagtaaagcttttaagttacattttattcatcacatcagtatccacat s panTro4.chr22 34417528 202 + 49737984 TTT--TAAAGAAAAAGAAAGAAGATCAAAGCATCTGCTCCATATACTCTTGGTACTGTTTTTTAATCAAATTGGTCACAACTTGTTATATATGTATAAATTATAAATGTA--TGCATGTATgtatatctttattaggaaaagacttggtgacaaaagtcagtaaagcttttaagttacgttttattcatcacatcagtatccacat i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30830907 201 + 46535552 ttt---aaagaaaaaaaaaGAAGATCAAAGCATCTGCTCCATGTACTCTTGGTACTGTTTTTTAATCAAATTGGTCACAACTTGttatatatatataaattataaatGTA--TGCATGTATgtatatctttattaggaaaagacttggtgacaaaagtcagtaaagcttttaagttacattttattaatcacatcagtatccacat i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100385912 203 - 115148730 TTTT-TTAAGAAAAAGAAAGAAAATCAAAGCATCTGCTCCGTATACTCTTAGTACTGTTTTTTAATCAAATTAGTCACAACTTGTtatatatgtataaattataaatgta--tgcatgtatgtatatctttattaggaaaagacttggtgacaaaagtcagtaaagcttttaagttacattttattcatcacatcagtatccacat i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80538687 198 + 95678458 ---aaaaaagaaaaagaaagaaGATCAAGGCATCTGCTCTGTATACTTTTGGTACTGTTTTTTAATCAAATTAGTCACAAC---TTATATATGTATAAATTATAAATGTA--TACATGTACATATGTCTTTTTTAGGAAAAGAATTGGTGACAAAAGTCAGTAAAGCTTTTAAGTTACATTTTATTCATAACGTCAGTATCCCCAT i rheMac3.chr10 I 42 C 0 s macFas5.chr10 80965538 198 - 96509753 ---aaaaaagaaaaagaaagaaGATCAAGGCATCTGCTCTGTATACTTTTGGTACTGTTTCTTAATCAAATTAGTCACAAC---TTATATATGTATAAATTATAAATGTA--TACATGTACATATGTCTTTTTTAGGAAAAGAATTGGTGACAAAAGTCAGTAAAGCTTTTAAGTTACATTTTATTCATAACGTCAGTATCCCCAT i macFas5.chr10 I 8 C 0 s papAnu2.chr10 76220595 198 + 90941950 ---gaaaaagaaaaagaaagaagatcaaGGCATCTGCTCTGTATACTTTTGGTActgttttttaatcaaattagTCACaac---ttatatatgtataaattataaatgta--tacatgtacatatgtcttTTTTAGGAAAAGACTTGGTGACAAAAGTCAGTAAAGCttttaagttacattttattCATAACGTCAGTATCcccac i papAnu2.chr10 I 16 C 0 s chlSab2.chr19 18487574 201 + 33263144 ---gaaaaagaaaaagaaagaagaTCAAGGCATCTGCTCTGTATACTTTTGGTACTGTTTTTTAATCAAATTAGTCACAACTTGTtatatatgtataaattatacatgta--tacatgtatgtatgtCTTTTTTAGGAAAAGACTTGGTGACAAAAGTCAGTAAAGCTTTTAAGTTACATTTTATTCATAACGTCAGTATCCCCAT i chlSab2.chr19 I 23 C 0 s canFam3.chr10 40821903 182 - 69331447 -------AACATAGAAAAGGAAAATCAAGCCATCTTCTCTATAGGTTGTTAGGACTCTTATC------------TCACAAGCTGTTATATATTCATAAGTTATATATGTATGTGCATATATATATAGATTCATTAAGAAAATATT-----ATAAAAGTCAGGAATGCTCTTAGGGCTTATTGTATTCATCACATTACTCTCCATAT i canFam3.chr10 C 0 C 0 e calJac3.chr1 198200869 0 + 210400635 C a score=24617.000000 s hg38.chr22_KI270876v1_alt 39358 29 + 263666 acatttAttttatttttattttattttat s panTro4.chr22 34417730 29 + 49737984 acatttattttatttttattttattttat i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30831108 18 + 46535552 aca-----------tttattttattttat i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100386115 23 - 115148730 acatttattttatttttatttta------ i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80538885 27 + 95678458 ACATttattttattattattattatta-- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80965736 27 - 96509753 ACAtttattttattattattattatta-- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76220793 27 + 90941950 acatttattttattttattttatttta-- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18487775 27 + 33263144 ACATTTATTTTATTAAttttttttttt-- i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40822085 0 - 69331447 C e calJac3.chr1 198200869 0 + 210400635 C a score=825025.000000 s hg38.chr22_KI270876v1_alt 39387 303 + 263666 ttttttgagacggagtttcact-ctgttgcccaggctgg---------------------------------------------agtgctatggcgcgatctcggctcactgcaacctccccgcctcctaggttcaagtgattctcctgcctcagcctcctgagtagctgggactacaggcgcccactaccgtgcctggctaatttttgtatgtttagtagagacgggatttcaccaagttggtcaggctggtcttgacctcct------------------gacctcaggtgacccacccgcctcggtgtcccaaagtgctgagattacaggcgtgagccaccgtgcccggccTTGTATCCACATA s panTro4.chr22 34417759 303 + 49737984 ttttttgtgacggagtttcact-ctgttgcccaggctgg---------------------------------------------agtgctatggcgcgatctcggctcactgcaacctccccgcctcctaggttcaagtgattctcctgcctcagcctcctgagtagctgggactacaggcgcccactaccgtgcctggctaatttttgtatgtttagtagagacgggatttcaccaagttggtcaggctggtcttgacctcct------------------gacctcaggtgacccacccgcctcggtgtcccaaagtgctgagattacaggcgtgagccaccgtgcccggccTTGTATCCACATA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30831126 303 + 46535552 ttttttgaggcagagtttcact-ctgttgtccaggctgg---------------------------------------------agtgctatagcgtgatctcagctcactgcaacctccccgcctcctaggttcaagcgattctcctgcctcagcctcctgagtagctgggactacaggtgcccactactatgcctggctaatttttgtatgtttagtagagacgggatttcaccatgttggtcaggctggtcttgaactcct------------------gacctcaggtgacccacccgccttggtgtcccaaagtgctgggattacaggaatgagccactgtgcccggccTAGTATCCACATA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100386138 302 - 115148730 -tttttgagacagagtttcact-ctgttgcccaggctgg---------------------------------------------agtgctatggtgccatctcggctcactgcaacctctccgcctcctaggttcaagtgattctcctgcctcagcctcctgagtagctgggactacaggcgcccactgccatgcctggctaatttttgtatgtttagtagagacgggatttcaccatgttggtcaggctggtcttgaactcct------------------gacctcaggtgacccacccgcctcggtgtcccaaagtgctgggattacaggtgtgagccaccgtgcccggccTAGTATCCACATA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80538912 319 + 95678458 -tttttgagacagagtttcactgttgttgctcaggctgg---------------------------------------------agtgctatggtacgatctcggctcagtgcaacctgt--gcctcctaggatcaagtgattctcctgcctcagcctcctgagtatctgggactacaggcacccactactatgcctggctaatttttgtatttttagtagagatgggatttcaccatgttggccaggctggtctcgaactcctcacctcaggtgatccatccacctcaggtgatccatccacctcggtgtcccaaagtgctgggattacagacacaagccactgtgcctggGCTGGTATCCACATA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80965763 319 - 96509753 -tttttgagacagagtttcactgttgttgcccaggctgg---------------------------------------------agtgctatggtacgatctcggctcagtgcaacctgt--gcctcctaggatcaagcgattctcctgcctcagcctcctgagtatctgggactacaggcacccactaccatgcctggctaatttttgtatttttagtagagatgggatttcaccatgttggccaggctggtctcgaactcctcacctcaggtgatccatccacctcaggtgatccatccacctcggtgtcccaaagtgctgggattacagacacaagccactgtgcctggGCTGGTATCCACATA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76220820 301 + 90941950 -tttttgagacagagtttcactgttgttgcccaggctgg---------------------------------------------agtgctatggtacgatctcggctcagtgcaacctct--gcctcctaggatcaagcgattcccctgcctcagcctcctgagtatctgggactacaggcacccactaccatgcctggctaatttttgtatttttagtagagatgggatttcaccatgttggccaggctggtctcgaactcct------------------cacctcaggtgatccatccaccttggtgtcccaaagtgctgggattacagacacaagccactgtgcctgggctggTATCCACATA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18487802 301 + 33263144 -tttttttgagactgtttcactgttgttgcccaggctgg---------------------------------------------agtgctatggtacgatctcggctgagcgcaacctct--gcctcctaggatcaagcgattctcctgcctcagcctcctgagtatctgggactacaggcgtccactaccatgcctggctaatttttgtatttttagtagagatgggatttcaccatgttggccaggctggtctcgaactcct------------------gacctcaggtgatccatccgcctcggtgtcgcaaagtgctgggattacagacacaagtcactgtgcctggGCTGGTATCCACATA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198200869 344 + 210400635 TTAtttgagacagggtctcgct-ctattacccaggctgggttgcagtgtcttgatctctgatctcactgcaacctccacctcccagttcaatagcgtgatctcggctcactacaacgtct--gtctcccgggttcaagcgattctcctgtctcagcctcctgagtagctgggactataggtgtgcaccatcatgcctggctactttttgtattttgggtagagacagggtttcaccatgttggccaggctggtctcgaactcct------------------gatctc--gtgatccacctgcctcagcctcccaaagtgctgggattacaggcgtgagctactgtgcccggccTAGTGTCCACACA i calJac3.chr1 C 0 C 0 e canFam3.chr10 40822085 0 - 69331447 C a score=461708.000000 s hg38.chr22_KI270876v1_alt 39690 142 + 263666 CATTTAGAAGAGAG-CTGTTTGTGGATGAATGGAATAGTAAGCCATCAGCCTAGGCCTGCATAGGGGTAGTTTGAACTGTGCTCCTGCTAAAAACACACGGCCACCCCCACCCAGGGCTCCAGGCCAGAG---TGGACCTtct----gtc s panTro4.chr22 34418062 142 + 49737984 CATTTAGAAGAGAG-CTGTTTGTGGATGAATGGAATAGTAAGCCATCAGCCTAGGCCTGCATAGGGGTAGTTTGAACTGTGCTCCTGCTAAAAACACACGGCCACCCCCACCCAGGGCTCCAGACCAGAG---TGGACCTtct----gtc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30831429 142 + 46535552 CATTTAGAAGAGAG-CTGTTTGTGGATGAAAGGAATAGTAAGCCATCAGTCTAGGCCTGGATAGGGGCAGTTTGAACTGTGCTCCTGCTAAAAACACACAGCCACCCCCACCCAGGGCTCCAGGCCAGAG---TGGACCTTCT----GTC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100386440 142 - 115148730 CATTTAGAAGACAG-CTGTTTGTGGATGAATGGAATAGTAAGCCATCAGCCTAGGCCTGCATAGGGGTAGTTTGAACTGTGCTTCTGCTAAAAACACACGGCCACCCCCACCCAGCGTTCCAGGCCAGAG---TGGATCTtct----gtc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80539231 142 + 95678458 CATTTGGAAGAGAG-CTGTTTGTGGATGAATGGAATAGTAAGCCACCAGCCTGGGCCTGCATAGGGGTAGTTCAAGCTGTGCTCCTGCTCAAAACACATGGCCACCCCCACCCAGGGCTCCAGGCCAGAG---TGGACCTtct----gtc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80966082 142 - 96509753 CATTTGGAAGAGAG-CTGTTTGTGGATGAATGGAATAGTAAGCCACCAGCCTGGGCCTGCATAGGGGTAGTTCAAGCTGTGCTCCTGCTCAAAACACATGGCCACCCCCACCCAGGGCTCCAGGCCAGAG---TGGACCTTCT----GTC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76221121 142 + 90941950 CATTTGGAAGAGAG-CTGTTTGTGGATGAATGGAATAGTAAGCCACCAGCCTGGGCCTGCTTAGGGGTAGTTCAAGCTGTGCTCCTGCTCAAAACACATGGCCACCCCCACCCAGGGCTCCAGGCCAGAG---TGGaccttct----gtc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18488103 146 + 33263144 CATTTAGAAGAGAG-CTGTTTGTGGATGAATGGAATAGTAAGCCACCAGCCTGGGCCTTCATAGGGGTAGTTCCAACTGTGCTCCTGCTCAAAACACATGGCCACCCCCACCCAGGGCTCCCGGCCAGAG---TGGACCTtctgtccgtc i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198201213 143 + 210400635 CATTTAGGAGAGAGCCTGTTCATGGATGGATAGTATAGTAAGCCACCACTCTAGGCCTGCACAGGGGTAGTTCAGACTGTGCTCCTGCTAAAAACACATGGCCACCTCCACCCAGGGCTCCAGGCCAGAG---TGGACCTTCT----GTC i calJac3.chr1 C 0 C 0 s canFam3.chr10 40822085 126 - 69331447 CAGCCAGAGGAGAG-CTGCCCATGGGTGAAAAGACTAGGAAGC---CAGTCTGGACGTGCAGAGGGACTGCTTCAACTGTGT----------GACACACGGTCACCT------AGGGGTTCCGGCCACAGAGAGGGACCCTCT----CTC i canFam3.chr10 C 0 I 5 a score=515080.000000 s hg38.chr22_KI270876v1_alt 39832 187 + 263666 tgtctgtctgtctg--------ctgCCCACATtgtaatagcccagtgggttcattttgccctctgcccagatagagttgatttatcaagacaggggaattgcaataaagagtttaattcatgcagagccagatgaatgggagactggagttttattattactcaagtcggtttctccaaaaattcgaggactggg s panTro4.chr22 34418204 191 + 49737984 tgtctgtctgtctg----tctgCTGCCCACATtgtaatagcccagtgggttcattttgccctctgcccagatagagttgatttatcaagacaggggaattgcaatagagagtttaattcacgcagagccagatgaatgggagactggagttttattattactcaagtcggtttctccaaaaattcgaggactggg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30831571 186 + 46535552 GGTCTGTCTGTCCG----TCTGCTGCCAACATtgtaatagcccagtgggttcattttgccctctgcccagatagagttgatttatcaagacaggggaattgcaataaagtgtttaattcacacagagccagat-----ggagactggagttttattattactcaagtcggtttctccaaaaattcgaggactggg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100386582 194 - 115148730 tgtctgtctgtctgtctgtctgCTGCCCACATtgtaatagcccagtgggttcattttgccctctccccaggtagagttgatttatcaagacaggggaattgcaataaagagtttaattcacgcagag-gagatgaatgggagactggagttttattattactcaagtcggtttctccaaaaatttgaggactggg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80539373 185 + 95678458 tgtctgtctgtctg--------CCACCCACAC--taacagcccagtgggttcattttgtcctctgcccagatagagttgatttatcaagacaggggaattgcaatcaagagtttaattcatgcagagccagatgaatgggagactggagttttattattactcaagtcagtttctccaaagattcgaggagtggg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80966224 185 - 96509753 TGTCTGTCTGTCTG--------CCACCCACAC--taacagcccagtgggttcattttgtcctctgcccagatagagttgatttatcaagacaggggaattgcaatcaagagtttaattcatgcagagccagatgaatgggagactggagttttattattactcaagtcagtttctccaaagattcgaggagtggg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76221263 187 + 90941950 tgtctgtctgtctg--------ccacCCACACTGTAACAGCCCAGTGGGTTCATTTTGCCCTCTGCCCAGATAGAGTTGATTTATCAGTACAGGGGAATTGCAATCAAGagtttaattcatgcagagccagaTGAATGGGAgattggagttttattattactcaagtcAGTTTCTCCAAAGATTCGAGGAGtggg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18488249 183 + 33263144 tgtctgtctgtctg--------ctgCCCACACtgtaacagcccaatgggttcattttgccctctgcccagatagagttgatttatcaagacaggggaattgcaatcaagagtttaattcatgcagcgccagatgaatgggagactagagttttattatt----aagtcagtttctccaaaaattcgaggagtggg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198201356 179 + 210400635 CGTCTG----------------CGATCTACATtgtaaccacccaatgggtttattttgccctctgccaagatagagttgattgatcaagacgggggaatagcaataaagagtttaatccatgcagagccggctgaatgggagtccggagtcttattattgctcaaatcagtttctctaaaaattcgaagactggg i calJac3.chr1 C 0 C 0 e canFam3.chr10 40822211 5 - 69331447 I a score=674656.000000 s hg38.chr22_KI270876v1_alt 40019 311 + 263666 tttt-ttgtt-ttgtttttt------t--gttttgtttttttagatgaactcttgctctgtcacccaggccggagtgcagtggcgctatttcggctcactgcaacctccacttccctggttcaagcgactctcctgcctcagcttcccgagtagcttggacta-----------caccacacccggctaacttttgtatttttagtagagatggggtttcaccatattggccaggctggttttgaactcctgaccctgtgatccgctcgcctgggcctcccaaaatgctgggattacaggcgtgagccaccgcgcctggccaggactgtt----tt s panTro4.chr22 34418395 310 + 49737984 tttt-ttgtt-ttgcttttt------t--gtttttttttttta-atgaactcttgctctgtcacccaggccggagtgcagtggcgcgatttcggctcactgcaacctccacttccctggttcaagcgactctcctgcctcagcttcccgagtagcttggacta-----------caccacacccggctaacttttgtatttttagtagagatggggtttcaccatattggccaggctggttttgaactcctgaccctgtgatccgcttgcctgggcctcccaaaatgctgggattacaggcttgagccaccgcgcctggccaggactggt----tt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30831757 326 + 46535552 tttt-ttgtt-ttgttttgt------t--tttttggttttttagatgaagtcttgctctgtcacccaggccggagtgcagtggcgcgatttcggctcactgcaacctctgcttcccgggttcaagcgattctcctgcctcagcttcctgagtagctgggactacaggcgcccgccaccacacccggctaacttttgtatttttagtagagacggggtttcaccatattggccaggctggttttgaactcctgaccctgtgatccactcgcctgggcctcccaaaatgctgggattacaagcatgagccatcgcgcctggccaggactggttttgtt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100386776 330 - 115148730 tttt-ttctt-ttgttttgttttttgt--tttttgttttttcagatgaagtcttgctctgtcacccagaccatagtgcagtggcgcgatttcggctcactgcaacctctgcttcccgggttcaagtgattctcctgcctcagcttcccgagtagctgggactacaggcgcctgccaccacagccggctaacttttgtatttttggtagagatggggtttcaccatattggccaggctggttttgaactcctgaccctgtgatccgctcgcctgggcctcccaaaatgctgggattacaggcgtgagccaccacgcctggccaggactggttt--tt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80539558 325 + 95678458 ttttgctgttgttgttgttg------gt-ttttttttttttgagacaaagtctcactctgttgcccaggctggagtgcagtggcgtgatctcagctcactgcaacctccgcttcccaggttcaagcaattctcctgccacagcctctggagtagctgggactacaggcgcccaccaccacaaccagctaacttttgtatttttagtagagacggggttttaccatattggccaggctggttttgaactcctgaccctgtgatccgctcacctgggcctcccagaatgctgggattacaggtatgagacaccacgcctggccaggatgggt----tt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80966409 326 - 96509753 ttttgctgttgttgttgttg------ttgttttttttttttgagacaaagtctcactctgtcgcccaggctggagtgcagtggtgtgatctcagctcactgcaacctccgcttcccaggttcaagcaattctcctgccacagcctctggagtagctgggactacaggcgcccaccaccacaaccagctaacttttgtatttttagtagagacggggttttaccatattggccaggctggttttgaactcctgaccctgtgatccgctcacctgggcctcccagaatgctgggattacaggtatgagacaccacgcctggccaggacgggt----tt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76221450 324 + 90941950 ttttgctgttgttgttgttg------t--ttttttttttttgagacgaagtctcactctgtcgcctaggctggggtgcagtggcgcgatctcagctcactgcaacctccgcttcccaggttcaagcaattctcctgccacagcctccagagtagctgggactacaggcgcccaccaccacgaccagctaacttttgtatttttagtagagacggggttttaccatattggccaggctggttttgaactcctgaccctgtgatctgctcacctgggcctcccagaatgctgggattacaggtatgagccaccacgcctggccaggactggt----tt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18488432 319 + 33263144 ttttgttgttgttgttgttg------t-------tgtttttaagacgaagtctcactttgtcgcccaggctggagtgcaatggcacaatctcggcttactgcaacctctgcttcctgggttcaagcaattctcctgtctcagcttcccaagtagctgggactacaggcgcccgccactatgcccagctaacttttgtatttttagtagagacggggttttaccatattggcctggctggttttgaactcctgaccctgtgatccgctcacctgggcctcccaaaatgctgggattacaggcatgagccaccacgcctggccaggactggt----tt i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40822211 5 - 69331447 I e calJac3.chr1 198201535 0 + 210400635 C a score=1620399.000000 s hg38.chr22_KI270876v1_alt 40330 568 + 263666 ttttttttaaaggataatttggtgggtaagggtccagggagtgaggagtactgatcgctggggttgaagctgaaatcataggatgtcgaagtcgccctc-ttgcgctgagcgggttcctgggtagaggccacaagaccagatgagccagttaatcagtctgggtggcgacagctgagccattgagtgcagggtctgaaaaatatctcgagcactcatgttaggttttacaatagtgatgttatctcgaggagcaattggggaggtttagaatcttgtggcctctggctgaataacacctaaactataatttctaatcttgtggccagttttttagtcctataaaggcagtctggtccctaggcaagaagggggtttgtttc-tgggaaagggctgttatcatctttgtttcaaagttaaactataaactaagttcttcccaaagttagttcagcttatgcccagaagaatgaacgagaacagcttggaggttagaagcaagatgaagccggttaggtcagacccctttcactgctgtaatttccccactgttagaatttttgcaaaggtg s panTro4.chr22 34418705 567 + 49737984 ttttttt-aaaggataatttggcaggtaagggtccagggagtgaggagtactgatcgctggggttgaagctgaaatcataggatgtcgaagtcgccctc-ttgtgctgagcgggttcctgggtagaggccacaagaccagatgagccagttaattagtctgggtggcgacagctgagccattgagtgcagggtctgaaaaatatctcgagcactcatgttaggttttacaatagtgatgttatctcgaggagcaattggggaggtttagaatcttgtggcctctggctgaataacacctaaactataatttctaatcttgtggccagttttttagtcctataaaggcagtctggtccctaggcaagaagggggtttgtttc-tgggaaagggctgttatcatctttgtttcaaagttaaactataaactaagttcttcccaaagttagttcagcttatgcccagaagaatgaacaagaacagcttggaggttagaagcaagatgaagccggttaggtcagacccctttcactgctgtaatttccccactgttagaatttttgcaaaggtg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30832083 568 + 46535552 ttttttttaaaggataatttggcgggtaagggtccagggagtgaggaatactgatcgctggggttgaagctgaaatcataggaagtcgaagtcgccctc-ttgtgctgagcacgttcctgggtagaggccacaagacgagatgaaccagtttatcagtctgggtggcgacagctgagccactgagcgcagggtctgaaaaatatctcgagaattcatgtgaggttttacagtagtgatgttatctcgaggagcaatcggggaggtttagaatcttgtggcctctggctgaataacacctaaactataatttctaatcttgtggccagttttttagtcctataaaggcagtctggtctctaggcaagaagggggtttgtttc-ggggaaagggctgttatcatctttgtttcaaagttaaactataaactaagttcctcccgaagttagttcatcttatgcccagaagaatgaacaagaacagcttggaggttagaagcaagatgaagccggttaggtcagacccctttcactgctgtaatttccccactgttagaatttttgcaaaggtg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100387106 570 - 115148730 tttttttttaaggataatttggcgggtaagggtccagggagtgaggagtactgatcgctggggttgaagctgaaatcacaggaagttgaagtcgccctctttgcgctgagccagttcctgggtagaggccacaagaccagataagccagtttatccgtctgggtggcaacagctgagccattgagtgcaggttctgaacaatatcttgagcattcatgttaggtttcacaatagtgacgttatctcgaggagcaattggggaggtttagaatcttgtggcctctggctgaataacacctaaactataatttctaatcttgtggccagatttgtagtcctataaaggcagtctggtccctaggcaagaagggggtttgtttcaggggaaagggctgttatcatctttgtttcaaagttaaactataaactaagttcctcccaaagttagttcagcttatgcccagaagaatgagcaagaacagcttggaggttagaagcaagatgaagccggttaggtcagacccctttcactgctgtaatctccccactgttagaatttttgcaaaggtg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80539883 563 + 95678458 ttttt---aaaggataatttggt-ggtaggggtccagggagtgaggagtactgatcgctggggttggagatgaaatcataggaagtcgaagtcactgtc-ttgcactgagctggtgtctgggtagaggccacaagaccagatgagccagttgatcagtctgggtggcgacagctgaaccactgagtgcagggtctgaaaaatacctcaagcactcgtgttaggttttccaatagtgatgttatgtcgaggagtaagtggggaggtttagaatcttgtggcctctggttgaataacacctaaattataatttctaatattatggctaattttttagtcctgtaaaggcagtctggtccctaggcaagaaaggggtttgtttc--gggaaggggctgttgtcatctttgtttcaaagttaaactataaactaagttcctcccaaagttagttgagcctatgcccagaagaaagaacaagaacagcttggaggttagaagcaagatgaagccggctaagtcagacccctttcactgccataatttccccactgttagaatttctgcaaaggtg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80966735 563 - 96509753 ttttt---aaaggataatttggt-ggtaggggtccagggagtgaggagtactgatcgctggggttggagatgacatcataggaagtcgaagtcaccgtc-ttgcactgagccggtgtctgggtagaggccacaagaccagatgagccagttgatcagtctgggtggcgacagctgaaccactgagtgcagggtctgaaaaatacctcaagcactcgtgttaggttttccaatagtgatgttatgtcgaggagtaagtggggaggtttagaatcttgtggcctctggttgaataacacctaaattataatttctaatattatggctaattttttagtcctgtaaaggcagtctggtccctaggcaagaagggggtttgtttc--gggaaggggctgttgtcatctttgtttcaaagttaaactataaactaagttcctcccaaagttagttgagcctatgcccagaagaaagaacaagaacagcttggaggttagaagcaagatgaagccggctaggtcagacccctttcactgccataatttcccccctgttagaatttctgcaaaggtg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76221774 563 + 90941950 ttttt---aaaggataatttggt-ggTAGGGGTCCAGGGAATGAGGAGTACTGATCGCTGGGGTTGGAGATGAAGTCATAGGAAGTCGAAGTCACCGTC-TTGCACTGAGCCGGTTCCTGGGTAGaggccacaagaccagatgagccagttgaTCAGTCTGGGTGGCGACAGCTGACCCACTGAGtgcagggtctgaaaaatatctcaagcactcgTGTTAGGTTTTCCAATAGTGATGTTATGTCGAGGAGCAAGTGGGGAGGTTTAGAATCTTGTGGCCTCTGGTTGAATAACACCtaaattataatttctaatattatggctaattttttagtccCGTAAAGGCAGTCTGGTCCCTaggcaagaagggggtttgtTTC--GGGAAGGGGCTGttgtcatctttgtttcaaagttaaactataaactaagttcctcccaaagttagttgaGCCTATGCccagaagaaagaacaagaacagcttggaggttagaagcaagatgaagCCGGCTAGGTCAGACCCCTTTCACTGCCATAATTTCCCCACTGTTAGAATTTCTGCAAAGGTG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18488751 564 + 33263144 ttttt---aaaggataatttggcaggtaggggtccagggagtgaggagtactgatcgctggggttggagatgaaatcataggaagtcgaagtcgccatc-ttgcactgagctggttcctgggtagaggccacaagaccagatgagccagtttatcagtctgggtggcgacagctgaaccactgagtgcagggtctgaaaaatatctcaagcactcgtgttaggttttctagtagtgatgttatgtcgaggagcaactggggaggtttagaatcttgtggcctctggttgaataacacctaaattataatttctaatattatggctaattttttagtcctataaaggcagtctggtccctaggcaagaagggggtttgtttc--gggaaggggctgttgtcatctttgtttcaaagttaaactataaactaagttcctcccaaagttagttgagcctatgcccagaagaaagaacaagaacagcttggaggttagaagcaagatgaagccggctaggtcagacccctgtcactgccataacttccccactgttagaatttctgcaaaggtg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198201535 549 + 210400635 ttttctttaaaggatcatttggcaggtaggggtccagggagtgaggggtactgatagctcaggttggagataaaatcagaggaagtccaagttaccctc-ttgtgctgagccagttcctgggtagaggccacaagctcagatgagccact--atcagtctggat-------gctgagccattgagtgcaaggtctgaaaaatatctagagccttcacgttaggttttacaatagtgatgttatctctaggagcaa-tggagcagtttagaatcttgtggc--ctggctgaataactcctaaac--taatttctaatcttgtggctaattttttaatgctataaaggcagtctggtccctaggcaagaacggggtttgtttc--gagaaaaggctgttaacatctttgtttcaaagttaaactataaacgaagtctctcccaaagttagttcagcctatgcc--gaggaatgaacaagaacagcatggaggttagaagccagatggagtcagtcaggtgagatccttttccctgccagaagatctc--ctgttagaattgttgcaaaagtg i calJac3.chr1 C 0 C 0 e canFam3.chr10 40822211 5 - 69331447 I a score=514118.000000 s hg38.chr22_KI270876v1_alt 40898 156 + 263666 gtttcGACATTGTACCTCGATTCTCAGGGCTCTGCCTCCTGCACACATTTTAGTGCTCAGATTGCCTAGATGTCTTTAGCCTCACTCGTG----------AACCTGTGCCAGAGTTGGAAAA--TTAACAATTTGATGTCAACTGTCCACAGTGATGAGGCTGGTATG s panTro4.chr22 34419272 156 + 49737984 gtttcGACATTGTACCTCGATTCTCAGGGCTCTGCCTCCTGCACACATTTTAGTGCTCAGATTACCTAGATGTCTTTAGCCTCACTCGTG----------AACCTGTGCCAGAGTTGGAAAA--TTAACAATTTGATGTCAACTGTCCACAGTGATGAGGCTGGTATG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30832651 156 + 46535552 gtttcGACATTGTACCTCGATTCCCAGGGCTCTGCTTCCTGCACACATTTTAGTACTCAGATTACCTAGATGTCTTTAGCCTCACTGGTG----------AACCTGTGCCAGAGTTGAAAAA--TTAACAATTTGATGTCAACTGTCCACAGTGATGAGGCTGATATG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100387676 156 - 115148730 gtttcGACACTGTACCTCGATTCCCAGGGCTCTGCCTCCTGCACACATTTTATAACTCAGATTATCTAGATGTCTTTAGCCTCACTGGTG----------AACCTGTGCCAGAGTTGGAAAA--TTAACAATTTGATGTCAACTGTCCACAGTGATGAGGCTGATATG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80540446 155 + 95678458 gtttTGACATTATACCTCGATTCCCAGGGCTCTGCCTCCTGCACACATTTTAGTACTCAGATTACCTCGATGTCTTTAGCCTCACTGGTG----------AACCTGTGCC-GAGTTGGAAAA--TTAACAGTTTGATGTCAGCTGTCCACAGTGATGAGGCTGCTGTG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80967298 155 - 96509753 gtttTGACATTATACCTCGATTCCCAGGGCTCTGCCTCCTGCACACATTTTAGTACTCAGATTACCTCGATGTCTTTAGCCTCACTGGTG----------AACCTGTGCC-GAGTTGGAAAA--TTAACAATTTGATGTCAGCTGTCCACAGTGATGAGGCTGCTGTG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76222337 155 + 90941950 GTTTTGACATTATACCTCGATTCCCAGGGCTCTGCCTCCTGCACACATTTTAGTACTCAGATTACCTCGATGTCTTTAGCCTCACTGGTG----------AACCTGTGCC-GAGTTGGAAAA--TTAACAATTTGATGTCAGCTGTCCACAGTGATGAGGCTGATGTG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18489315 155 + 33263144 gtttTGACATTATACCTCGATTCCCAGGATTCTGCCTCCTGCACACATTTTAGTGCTCAGATTACCTCGATGTCTTTAGTCTCACTGGTG----------AACCTGTGCC-GAGTTGGAAAA--TTAACAATTTGATGTCAACTGTCCACAGTGATGAGGCTGATATG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198202084 158 + 210400635 gtttcGACCTTGTACCTTGATTCCCAGGGCTCTGCCTCCTGTATGCATTTTAGCCCTCAGATTACCCAGATGTTTTTAGCCTCACTGGGG----------AACCTGTGCCAGAGTTGGAAAATTTTATTTGTTTGACGTCAACTGGCCATAGTGATGAGGCTGCTGTG i calJac3.chr1 C 0 M 426 s canFam3.chr10 40822216 165 - 69331447 GCTCCCACATTGTACCTTAATTCTCAGGGCCCTGCTCCCTGTATGTGTCAGAGAACTCAGATGACCTAGAAGTTTTTAG-CTTACTGGTGAGAGTTGGAAAAATAATTCCAGAGGAGGAGAA--ATAATCACATGATGTGGACTGTCCACAGGGATGAGGCCAACATA i canFam3.chr10 I 5 C 0 a score=218724.000000 s hg38.chr22_KI270876v1_alt 41054 83 + 263666 CTGTCCTACTTTCTGTTTGAAGAGCTGATGCGATGTGACAAAGATTCCATGCCAGATGGAAATCTGTCAGAGGAGGAAAAATT s panTro4.chr22 34419428 83 + 49737984 CTGTCCTACGTTCTGTTTGAAGAGCTGATGCGATGTGACAAAGATTCCATGAAAGATGGAAATCTGTCAGAGGAGGAAAAATT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30832807 83 + 46535552 CTGTCCTACGTTCTGTTTGAAGAGCTGGTGCGATGTGACAAAGATTCCATGCCAGATGGAAATCTGTCAGAGGAGGAAAAACT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100387832 83 - 115148730 CTGTCCTACGTTCTGTTTGAAGAGCTGATGCGATGTGACAAAGATTCCATGCCAGATGGAAATCTGTCAGAGGAGGAAAAACT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80540601 83 + 95678458 CTGTCCTGTGTTCTGTTTGAAGAACTGATGCGATGTGACAAAGATTCCATGCCAGACGGCTGGCTGTCAGAGGAGGAAAGACT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80967453 83 - 96509753 CTGTCCTGTGTTCTGTTTGAAGAACTGATGCGATGTGACAAAGATTCCATGCCAGACGGCTGGCTGTCAGAGGAGGAAAGACT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76222492 83 + 90941950 CTGTCCTGTGTTCTGTTTGAAGAACTGATGCGATGTGACAAAGATTCCATGCCAGATGGCTGGCTGTCAGAGGAGGAAAAACT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18489470 83 + 33263144 CTGTCCTGTGTTCTGTTTGAAGAACTGATGCGATGTGACAAAGATTCCATGCCAGATGGGTATCTGTCAGAGGAGGAAAAACT i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40822381 80 - 69331447 CTGTACCATATGCTGATGGAAGAGCTGATGCAAAATAAGGAAGCATCCATGCTGGA---AAACCTATCGGAGGAGGAAAAAAT i canFam3.chr10 C 0 C 0 e calJac3.chr1 198202242 426 + 210400635 M a score=906666.000000 s hg38.chr22_KI270876v1_alt 41137 252 + 263666 GTTTCTCTCATATTTTCCTTTGCACAAGTTTGAGCTAGAACAGAACATCAAAGAACTTAACACCCTTGCGGACCAAGTTGACACCACTCACGAGTTGCTTACCAAGACCAGCCTGGTGGCCAGCTCTTCCGGGGCTGTTTCTGGGGTCATGAACATCCTGGGTTT-GGCCCTAGCACCTGTGACAGCAGGAGGCAGTCTCATGCTCTCAGCAACTGGGACAGGGTTGGGGGCAGCAGCTGCCATCACCAACAT s panTro4.chr22 34419511 252 + 49737984 GTTTCTCTCATATTTTCCTTTGCACAACTTTGAGCTAGAACAGAACATCAAAGAACTTAACACCCTTGTGGACCAAGTTGACACCACTCACAAGTTGCTCACCAAGACCAGCCTGGTGGCCAGCTCTTCCGGGGCTGTTTCTGGGGTCATGAACATCCTGGGTTT-GGCCCTAGCACCTGTGACAGCAGGAGGCAGTCTCATGCTCTCAGCAGCTGGGACAGGGTTGGGGGCAGCAGCTGCCATCACCAACAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30832890 252 + 46535552 GTTTCTCTCATATTTTCCTTTGCACAAGTTTGAGCTAGAACAGAACATCAAAGAACTTAACACCCTTGCAGACAAAGTTGACACCACTCGCAAGTTGCTTACCAAGACCAGCCTGGTGGCCAGCTCTTCCCGGGCTGTTTCTGGGGTCATGAACATCCTGGGTTT-GGCCCTAGCACCTGTGACAGCAGGAGGCAGTCTCACGCTCTCAGCAGCTGGGACAGGGTTGGGGGCAGCAGCTGCCGTCACCAACAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100387915 251 - 115148730 GTTTCTCTCATATTTTCCTTTGCACAAGTTTGAGCTAGAACAGAACATCAAAGATCTTAACACCCTTGCGGACCAAGTTGACACCATTCACAAGTTGTTCACC-AGACCAGCCTGGTGGCCAGCTCTTCCGGAGTCGTTTCTGGGGTCATGAACATCCTGGGTTT-GGCCCCAGCACATGTGACAGCAGGAGGCAGTTTCATGCTCCCAGCAGCTGGGACAGAGTTGGGGGCAGCAGCTGCCATCACCAACAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80540684 252 + 95678458 GTTTCTCTCGTATTTTCCTTTGCACAAATTTGAGCTAGAACAGAACATCAAAGAACTTAACATCCTTGCGGACCAAGCTGACACCACTCACAAGTTGCTGACCAAGACCAGCCCGGTGGCCAGCTCTTCCGGGACTGTTTCTGGGGTCATGAGCATCCTGGGTTT-GGCCCTAGCACCTGTGACAGCAGGAGGCAGTCTCGTGCTCTCAACAGCTGCGACAGGGTTGGGGGCAGCAGCTGCCATCACCAACAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80967536 252 - 96509753 GTTTCTCTCGTATTTTCCTTTGCACAAATTTGAGCTAGAACAGAACATCAAAGAACTTAACATCCTTGCGGACCAAGCTGACACCACTCACAAGTTGCTGACCAAGACCAGCCCGGTGGCCAGCTCTTCCGGGACTGTTTCTGGGGTCATGAGCATCCTGGGTTT-GGCCCTAGCACCTGTGACAGCAGGAGGCAGTCTCGTGCTCTCAACAGCTGCGACAGGGTTGGGGGCAGCAGCTGCCATCACCAACAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76222575 252 + 90941950 GTTTCTCTCGTATTTTCCTTTGCACAAATTTGAGCTAGAACAGAACATCAAAGAACTTAACATCCTTGCGGACCAAGTTGACACCACTCACAAGTTGCTGACCAAGACCAGCCCGGTGGCCAGCTCTTCCGGGGCTGTTTCTGGGGTCATGAGCATCCTGGGTTT-GGCCCTAGCACCTGTGACAGCAGGAGACAGTCTCGTGCTCTCAGCAGCTGCGACAGGGTTGGGGGCAGCAGCTGCCATCACCAACAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18489553 252 + 33263144 GTTTCTCTCATATTTTCCTTTGCACAAATTTGAGCTAGAACAGAACATCAAAGAACTTAACACCCTTGCGGACCAAGTTGACACCACTCACAAGTTGCTGACCAAGACCAGCCTGGTGGCCAGCTCTTCCGGGGCTGTTTCTGGGGTCATGAGCATCCTGGGTTT-GGCCGTAGCACCTGTGACAGCAGGAGGCAGTCTCATGCTCTCAGCAGCTGCGACAGGGTTGGGGGCAGCAGCTGCCATCACCAACAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198202680 252 + 210400635 GTTTCTTTCGTATTTTCATTTGCACAAGTTCGAGCTAGAACAGGATATCAAAGAACTTAACA-CCTTGTGAACCAAGTTGACACAACTTACAAGTTGCTCACCAAGACCGGTCTGCTGGCCGGCTCTTCAGGGGCCGTTTCTGGGGTCATGAACATCCTGGGTTTGGGCCCTAGCACCTATGATGGCAAGAGGCAGTCTCATGCTCTCAGCAGCTGGGATGGGGTTGGGGGCAGCAGCTGCCATCACCAACAT i calJac3.chr1 M 426 C 0 s canFam3.chr10 40822461 252 - 69331447 ATTTCTCTTCTGGTTTCCCTTGCAGAAGAATAATCTGAAAAAGAATATCAGAGAACTCCACGCTCTCGCAGACCAAGTTGATGCAAAGCATAAGATGCTCACCAAGACCAGCCTGGTGGCCAGCTCCTCAGGCACTGTCTCTGGAGTCATGAGCATCTTGGGTTT-TGCCCTGGCACCCGTGACAGTAGGGGGGAGTCTGATGCTCTCAGCAGCTGGGCTGGGCCTGGGGGTAGCAGCCGTTGCCACCAACAC i canFam3.chr10 C 0 C 0 a score=1017760.000000 s hg38.chr22_KI270876v1_alt 41389 364 + 263666 AGTAACAAATGTCTTAGAAAATAGAAGCAATTCAGCAGCAAGAGACAAAGCCAGCCGACTGGGGCCTCTG------ACAACATCACATGAGGCTTTCGGAGGAATAAATTGGTCTGAAATCGAGGCTGCTGGCTTTTGTGTTAATAAGTGTGTAAAAGCTATCCAGGGCATCAAGGATCTTCATG-CCTACCAGATGGCCAAATCCAACTCTGGCTTCATGGCTATGGTCAAGAATTTTGTGGCCAAGAGACACATCCCTTTCTGGATGGCTAGAGGGGTGCAGAGAGCCTTTGAGGGCACAACTCTGGCCATGACCAATGGTGCCTGGGTGATGGGTGCTGCTGGGGCTGGCTTCTTACTTATGAAAGAC s panTro4.chr22 34419763 364 + 49737984 AGTAACAAATGTCTTAGAAAATAGAAGCAATTCAGCAGCAAGAGACAAAGCCAGCCGACTGGGGCCTCTG------ACAACATCACATGAGGCTTTCGGAGGAATAAATTGGTCTGAAATCGAGGCTGCTGGCTTTTGTGTTAATAAGTGTGTAAAAGCTATCAAGGGCATCAAGGATCTTCATG-CCTACCAGATGGCCAAATCCAACTCTGGCTTCATGGCTATGGTCAAGAATTTTGTGGCCAAGAGACACATCCCTTTCTGGAGGGCTAGAGGGGTGCAGAGAGCCTTTGAGGGCACAACTCTGGCCATGACCAATGGTGCCCGGGTGATGGGTGCTGCTGGGGCTGGCTTCTTACTTATGAAAGAC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30833142 345 + 46535552 AGTAACAAATGTCTTAGAAAATAGAAGCAATTCAGCAGCAACAGACAAAGCCAGCCGACTGGGGCTTCTG------ACAACATCACATGAGGCTTTCGGAGGAATAAATTGGTCTGAAATCGAGGCTGCTGGCTTTTGTGTTAATAAGTGTGTAAAAGCCATCAAGGGCATCAAGGACCTTCGTGCCCTACCAGATGGCCAAATCCAACTCTGGCTTCATGGCTATGGTCAAGAATTTTGTGGCCACAAGACACATCCCTTTCTGGAGGGCTA--------------------CAGGGCACAACTCTGGCCATGACCAATGGTGCCCGGGTGATGGGTGCTGCTGGGGCTGGCTTCTTACTTATGAAAGAC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100388166 364 - 115148730 AGTAACAAATGTCTTAGAAAATAGAAGCAATTCAGCAGCAAGAGACAAAGCCAGCCGACTGGGGCCTCTG------ACAAGATCACATGAGGCTTTCAGAGGAATAAATTGGTCTAAAATCGAGGCTGCTGGCTTTTGTGTTAATAAGTGTGTAAAAGCCATCAAGGGCATCAAGGACCTTTGTG-CCTACCAGATGGCCAAATCTAACTCTGGCTTCATGGCTGTGGTCAATAATTTTGTGGCCACAAGACACATCCCTTTCTGGAGGGCTAGAGGGGTGCAGAGAGCCTCTGAGGGCACAACTCTGGCCATGACCAATGGTGCCCGGGTGATGGGTGCTGCTGGGGCTGGCTTCGTACTTAAGAAAGAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80540936 364 + 95678458 AGTAACAAATGTTTTAGAAAATAGGAGCGATTCAGCAGCAAGAGACAAAGCCAGCCGACTGGGGCCTCTG------ACGACATCACATGAGGCTTTTGGAGAAATAAATTGGTCTGAAATCGGGGCTGCTGGCTTTTGTGTTGACAAGTGTGTAAAAGCCATCAAGGGCATCAGGGACCTTCGTG-CCTACCAGATGGCCAAAGCCAACTCTGGGTTCATGGCTATGGTCAAGAATTTTGTGGTCACAAGACACATCCCTTTCTGGTGGGCTAGAGGGGTGCAGAGAGCCTTTGAGGGCACAACTCTGGCCATGACCAATGGTGCCCGGGTGATGGGTGCTGCTGGGGCTGGCTTCTTACTTCTGAAAGAC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80967788 364 - 96509753 AGTAACAAATGTTTTAGAAAATAGGAGCGATTCAGCAGCAAGAGACAAAGCCAGCCGACTGGGGCCTCTG------ACGACATCACATGAGGCTTTTGGAGAAATAAATTGGTCTGAAATCGGGGCTGCTGGCTTTTGTGTTGACAAGTGTGTAAAAGCCATCAAGGGCATCAGGGACCTTCGTG-CCTACCAGATGGCCAAAGCCAACTCTGGGTTCATGGCTATGGTCAAGAATTTTGTGGTCACAAGACACATCCCTTTCTGGAGGGCTAGAGGGGTGCAGAGAGCCTTTGAGGGCACAACTCTGGCCATGACCAATGGTGCCCGGGTGATGGGTGCTGCTGGGGCTGGCTTCTTACTTCTGAAAGAC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76222827 364 + 90941950 AATaacaaatgttttagaaaataagagCGATTCAGCAGCAAGAGACAAAGCCAGCCGACTGGGGCCTCTG------ACGACATCACATGAGGCTTTTGGAGAAATAAATTGGTCTGAAATCGGGGCTGCTAGCTTTTGTGTTGACAAGTGTGTAAAAGCCATCAAGGGCATCAGGGACCTTCGTG-CCTACCAGATGGCCAAAGCCAACTCTGGGTTCATGGCTATGGTCAAGAATTTTGTGGTCACAAGACACATCCCTTTCTGGAGGGCTAGAGGGGTGCAGAGAGCCTTTGAGGGCACAACTCTGGCCATGACCAATGATGCCCGGGTGATGGGTGCTGCTGGGGCTGGCTTCTTACTTCTGAAAGAC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18489805 359 + 33263144 AGTAACAAATGTTTTAGAAAATAGGAACGATTCAGCAGCAAGAGACAAAGCCAGCCGACTGGGGCCTCTG------ACGACATCACATGAGGCTTTCGGAGAAATAAATTGGTCTGAAATCGGGGCTGCTGGCTTTTGTGTTGATAAGTGTGTAAAAGCCATCAAGGGCATCAGGGACCTTCGTG-CCTACCAGGTGGCCAAAGCCAAC-----GTTCATGGCTATGGTCAAGAATTTTGTGGTCACAAGACACATCCCTTTCTGGAGGGCTAGAGGGGTGCAGAGAGCCTTTGAGGGCACAACGCTGGCCATGACCAATGGTGCCCGGGTGATGGGTGCTGCTGGGGCTGGCTTCTTACTTCTGAAAGAC i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40822713 370 - 69331447 GTTGACGAGTATCTTAGAAAGGAACAGCAATTCGGCAGCCAGAGACAGAGCCAGCAGACTGGTGCCTGTTCCAGCCATGACGGTACATGATAGCTCTGAAGAAAGGGGGTGCTCTGAAATCAGTGCTGCTTTGTTGTGTATTGATAAGTGTGTCAGAGCCTTCAAGAACCTCAAGGAACTTCGGG-CCTACCAGATGGCCAAAGCCAACTCTGGCTTCATGGCCAAGGTCAATAAATTCATGGCCATGGGCCATATCCCCTTCTGGAGGACGGGAGGACTGCAGAGAGCTGTTGGAGCCTCGGTTATGCCCATGACCAAAGTTGCCCGACTGCTGGGTGCTGCTGGGGCTGGCCTCTCCCTTATGCAGGAC i canFam3.chr10 C 0 C 0 e calJac3.chr1 198202932 0 + 210400635 C a score=1466624.000000 s hg38.chr22_KI270876v1_alt 41753 494 + 263666 ATGAGCAGCTTCCTGCAGAGCTGGAAGCACCTGGAGGATGGGGCAAGGACGGAGACAGCAGAGGAACTGAGAGCACTTGCTAAGAAGCTGGAGCAGGAGCTGGACCGGCTCACCCAGCACCACCGGCACCTGCCGCAGAAGGCGAGCCAGACCTGTTCCAGCTCCCGGGGCAGGGCTGTTCGAGGATCCCGTGTGGTTAAACCAGAAGGTAGGAAGgcagcgaataacacggacgtggtcttgctcttctaaaagcttaccatgagggt-ggggggcgacgaatgct----aaacggacacatca----gtGCATAACTACAGCTGCCCCTTCTGCAAAGAGAGGACTTGCCGCACACCCCTGACATTAACTAGGCGCCCTCTGTTCTTCCCAGAATTGCGTTCTGTTCTCTCAAAGCCCTGACCATAAATAACCATAAATTCTTGAAATCCCATATTTGTGTGTTTGT---GGGGGTGCTCCCTGTCTGCCTCTCCTGTGGTCTG s panTro4.chr22 34420127 494 + 49737984 ATGAGCAGCTTCCTGCAGAGCTGGAAGCACCTGGAGGATGGGGCAAGGACGGAGACAGCAGAGGAACTGAGGACACTTGCTAAGAAGCTGGAGCAGGAGCTGGACTGGCTCACCCAGCACCACCGGCACCTGCTGCAGAAGGCGAGCCAGACCTGTTCCAGCTCCCGGGGCAGGGCTGTTCGAGGATCCCGTGTGGTTAAACCAGAA-GTAGGAAGGCAGCGAATAACACAGACGTGGTCTTGCTCTTCTAAAAGCTTACCATGGGGGTGGGGGGGCGACGAATGCT----AAACGGACACATCA----GTGCATAACTACAGCTGTCCCTTCTGCAAAGAGAGGACTTGCCGCACACCCCTGACATTAACTAGGCGCCCTCTGTTCTTCCCAGAATTGCGTTCTGTTCTCTCAAAGCCCTGACCATAAATAACCATAAATTCTTGAAATCCCATATTTGTGTGTTTGT---GGGGGTGCTCCCTGTCTGCCTCTCCTGTGGTCTG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30833487 492 + 46535552 ATGAGCAGCTTCCTGCAGAGCTGGAAGCACCTGGAGGATGGGGCGAGGACGGAGACAGCAGAGGAACTGAGGACACTTGCTAAGAAGCTGGAGCAGGAGCTAGACTGGCTCACCCAGCGCCACTGGCACCTGCTGCAGAAGGCGAGCCGGACCTGTTCCAGCTGTCGGGGCAGGGCTGTTTGAGGATCCCATGTGGTTAAACCAGAAGGTAGGAAGGCAGCGAATAACACAGACGTGGTCTCGCTCTTCTAAAAGCTTACCATGGGGGT-GGGGGGCGAGGAATGCT----CAACGGACACGTCA----ATGCATAATTACAGCTGTCCCTTCTGCAAAGAGAGGACTTAACGCACACCCCTGACATTAACTAGGGGCCCTCTGTTCTTCCCAGCATTGCGT--TGTTCTCTCAAAGCCCTGACCATAAATAACCATAAATTCTTGAAATCCCATATTTGTGTGTTTGT---GGGGGTGCTCCCTGTCTGCCTCTCCTGTGGTCTG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100388530 492 - 115148730 ATGAGCAGCTTCCTGCAGAGCTGGAAGCACCTGGAGGATGGGGCAAGGACGGAGACAGCAGAGGAACTGAGGACACTTGCTAAGAAGCTGGAGCAGGAGCTCGACCGGCTCACCCAGCGCCACCGGCACCTGCTGCAGAAGGCGAGCCGGACCTCTTCCAGCTGCCGGGGCAGGGCTGTTCGAGGATCCCGTGTGGTTAAACCAGAAGGTAGGAAGGCAGCGAATAACACAGACATGGTCTTGCTCTTCTAAAAGCTTACCATGGGGGT-GGGGGGCGAGGAATGCT----AAACGGACACATCA----GGGCATAACTACAGCTGTCCTTTCTGC--AGAGAGGACCTGCCGCACACCCCTGACATTAACTAGGCACCCTCTGTTCTTCCCAGAATTGCGTTCTGTTCTCTCAAAGCCCTGACCATAAATAACCATAAATTCTTGAAATCGCATATTTGTGTGTTTGC---GGGGATGCTCCCTGTCTGCCTCTCCTGTGGTCTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80541300 497 + 95678458 ATGAGCAGCTTCCTGCAGAGCTGGAAGCACCTGGAGGATGGGGCAAGGACAGAGACAGCAGAGGAACTGAGGACACTTGCTAAGAAGCTGGAGCAGGACCTGGACTAGCTCACTGAGCGCCACCGGCACCTGCTGCAGAAGGCAAGCCGGACCTGTTCCAGCTGCCGGGGAAGGGCTGTTCGAGGATCCCGTGTGGTTAAACCAGAAGGTAGGAAGGCAGCAAATAACACAGATGTGGTCTTGCTCTTCTAAAAGCTTAGCCTGGGGGT--GGGGGCGAGGAATGCTAAACAAACGGACACATCA----ATGCATAACTACAGCTGTCCTTTCTTCAAAGAGAGGACTTGCCCCACACCCCTGACATTAACTAGCTGCCCTCAGTTCTTCCCAGGATTGCATTCTCTTCTCTCAAAGCCCTGACCATAAATAACCATAAATTCTTGAAATCCCATATGTGTGTGTTTGT---GGGGGTGCTTCCTGTCTGCCTCTTCTGCGGTCTG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80968152 497 - 96509753 ATGAGCAGCTTCCTGCAGAGCTGGAAGCACCTGGAGGATGGGGCAAGGACAGAGACAGCAGAGGAACTGAGGACACTTGCTAAGAAGCTGGAGCAGGACCTGGACTAGCTCACTGAGCGCCACCGGCACCTGCTGCAGAAGGCAAGCCGGACCTGTTCCAGCTGCCGGGGAAGGGCTGTTCGAGGATCCCGTGTGGTTAAACCAGAAGGTAGGAAGGCAGCAAATAACACAGATGTGGTCTTGCTCTTCTAAAAGCTTAGCCTGGGGGT--GGGGGCGAGGAATGCTAAACAAACGGACACATCA----ATGCATAACTACAGCTGTCCTTTCTTCAAAGAGAGGACTTGCCCCACACCCCTGACATTAACTAGCTGCCCTCAGTTCTTCCCAGGATTGCATTCTCTTCTCTCAAAGCCCTGACCATAAATAACCATAAATTCTTGAAATCCCATATGTGTGTGTTTGT---GGGGGTGCTTCCTGTCTGCCTCTCCTGTGGTCTG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76223191 497 + 90941950 ATGAGCAGCTTCCTGCAGAGCTGGAAGCACCTGGAGGATGGGGCAAGGACAGAGACAGCAGAGGAACTGAGGACACTTGCTAAGAAGCTGGAGCAGGACCTGGACCAGCTCACTGAGCGCCACCGGCACCTGCTGCAGAAGGCAAGCCGGACCTGTTCCAGCTGCCGGGGAAGGGCTCTTCGAGGATCCCGTGTGGTTAAACCAGAAGGTAGGAAGGCAGCAAATAACACAGATGTGGTCTTGCTCTTCTAAAAGCTTAGCCTGGGGGT--GGAGGCGAGGAATGCTAAACAAACGGACACATCA----ATGCATAACTACAGCTGTCCTTTCTTCAAAGAGAGGACTTGCCCCACACCCCTGACATTAACTAGCTGCCCTCAGTTCTTCCCAGGATTGCATTCTCTTCTCTCAAAGCCCTGACCATAAATAACCATAAATTGTTGAAATcccatatgtgtgtgtttgt---gggggtGCTTCCTGTCTGCCTCTCCTGTGGTCTG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18490164 498 + 33263144 ATGAGCAGCTTCCTGCAGAGCTGGAAGCACCTGGAGGATGGGGCAAGGACGGAGACAGCAGAGGAACTGAGGACACTTGCTAAGAAGCTGAAGCAGGACCTGGACTGGCTCACTGAGCGCCACCGGCACCTGCTACAGAAGGCAAGCCGGACCTGTTCCAGCTGCTGGGGAAGGGCTGTTCGAGGATCCCGTGTGGTTAAACCAGAAGGTAGGAAGGCAGCAAATAACACAGATGTGGTCTTGCTCTTCTAAAAGCTTAGCATGGGGGT-GGGGGGTGAGGAATGCTAAACAAACGGACACATCA----ATGCATAACTACAGCTGTCCTTTCTTCAAAGAGAGGACTTGCCCCACACCCCTGACATTAACTAGCTGCCCTCAGTTCTTCCCAGGATTGCATTCTCTTCTCTCAAAGCCCTGACCATAAATAACCATAAATTCTTGAAATCCCATATGTGTGTGTTTGT---GGGGGTGCTTCCTGTCTGCCTCTCCTGTGGTCTG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198202932 404 + 210400635 GTGAGAAGCTT-CTGCGGAGCTGGAAGCTCCCGGAGGATGGGGCAAGGACAGAGACAGCAGAGGAACTGGGGACACTTGCTAAGAAGCTGGAGCAGGAACT----------------------------------------------------------------------------------GGATCCCATGTTGTTAAACCGAAAGGTAGGAAGGCAGTGAGTAACACG--TGTGGTCTTACTCTTCAAAAAGCTTACCGT-AGGGT-GGGGAACGAGGGATGCTAAACCAACGGACACATCA----ATACCTAACTACACCGGTCCTTTCTTCAAAGAGAGGACTTGCCCCACTCCCCTGACATTAACTAGGTGCCCTCTGTT-TTCCCAGTATCCCGTTCTCTTCTCTCAAGGCACTG----------ACTGTAAATTCTTGAAATCCCATATTTGTGTGTTTGGGCAGGGGCTGCTCCCAGTCTGCCTCTCCTGTGGCCTG i calJac3.chr1 C 0 C 0 s canFam3.chr10 40823083 427 - 69331447 TTGAGAAGCCTCCAGCAGAGCTGGACGCACCTGGAGGAGGGAGCAAAGGCCGAGACTGCTGAGGAGCTGAGGGCCGTTGCCGGGGCGCTGGAGCAGGAACTGGACCAGCTCACCCAGCGCTAC--------------------------GAGCTGATC---ATCTGGCGGCAGGGCCAGCTGAAGAGCCCGCTC--CTGAGTCAGGAGGTAGGAAAG-GGTGCTCAGGGCCCATGTGGTCACGGTCCCCCG------------GAGCAT-CTGGGGCGCTGAAT-------AGGTAGATGCATCAGCAGATGTATGATCAGAGCT-----TTATGC--AGAGAGGACAGTCCCCACACCCCTCAGCTAAACCAGGCCCCTCCTGTTCTCTCCAGAATCCCTTCTTTCTCTCTCAAAGTGCTGATCAGCACT---------CTTCTGAAATCACCCAT-------TTCGT---GTAGGTA-TCACTGTCTGTCTGTCCTCCCGTCCG i canFam3.chr10 C 0 I 25 a score=613572.000000 s hg38.chr22_KI270876v1_alt 42247 208 + 263666 CAGGCTCTGGCAGGGaaggataatttggcggataggggtccagggagtgagcagtgctggttgctgggactggagatgacatcataggaagtcgaagtcgccctcttgcgctgagccggttcctgggtagaggccacaagatcagatgagccagtttatcagtctgggtggcgacagctgagccatTGtgtccctcttgtccatacca s panTro4.chr22 34420621 208 + 49737984 CAGGCTCTGGCAGGGaaggataatttggcggataggggtccagggagtgagcagtgctggttgctgggactggagatgacatcataggaagtcgaagtcgccctctggcgctgagccggttcctgggtagaggccacaagatcagatgagccagtttatcagtctgggtggcgacagctgagccatTGtgtccctcttgtccatacca i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30833979 208 + 46535552 CAGGCTCTGGCAGGGaaggataatttggcggataggggtctggggagtgagcagtgctggttgctgggactggagatgacatcatgggaagtcgaagtcgccctcttgcgctaggccggttcctgggtagaggccacaagatcagatgagccagtttatcagtatgagtggcgacagctgagccatTGtgtccctcttgtccatacca i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100389022 207 - 115148730 CAGGCTC-GGCAGGGaaggataatttggcggataggggtccagggagtgagcagtgctggttgctgggactggagatgacgtcataggaagtcgaagtcaccctcttgcgctgagtcggttcctgggtagaggccacaataccagatgagccagtttattagtctgggtggcgacagctgagccatTGtgtccctcttgtccatacca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80541797 208 + 95678458 CAGGCTCCAGCAGGGaaggctaatttggtgaacaggggtccggggagtgaggagtgctggttgctcggattggagatgacatcacaggaagtcgaagtcaccttcttgcgctgagccggttcctgggtagaggcgacaagaccagatgagccagtttatcagtctgggtggcgacggctgggccaCTGtgtccctcttgtccatacca i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80968649 208 - 96509753 CAGGCTCCAGCAGGGaaggctaatttggtgaacaggggtccggggagtgaggagtgctggttgctcggattggagatgacatcacaggaagtcgaagtcaccctcttgcgctgagccggttcctgggtagaggcgacaagaccagatgagccagtttatcagtctgggtggcgacggctgggccatTGtgtccctcttgtccatacca i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76223688 208 + 90941950 CAGGCTCCAGCAGGGAAGGATAATTTGGTGTACAGGGGTCCGGGGAGTGAGGAGTGCTGGTTGGTCGGATTGGAGATGACATCATAGGAAGTCGAAGTCACCCTCTTGCGCTGAGCCCGTTCCTGGGTAGAGGCgacaagaccagatgagccagtttatcagtCTGGGTGGCGACGGCTGGGCCATTGTGTCCCTCTTGTCCATACca i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18490662 208 + 33263144 CAGGCTCCAGCAGGGaaggataatttggtgaataggggtccggggagtgaggagtgctggttgctcggattggagatgacatcataggaagtcgaagtcaccctcttgcgctgagccggttcctgggtagaggccacaagaccagatgagccagtttatcagtctgggtggtgacagctgggccatTGtgtccctcttgtccatacca i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198203336 201 + 210400635 CAGGCTCTGGCAGGGaagaataatttgatggacaagggtccaggaagtgaggtgggctgattgcttggattggagatgaaatcagag------taagtcaccttcttgcgctgagctggttcctaggtagaggccacaagaccagatgagccagtttattagtctggctggcgacagttgagcca-tGTGTCGCtcttgtccgtacca i calJac3.chr1 C 0 C 0 e canFam3.chr10 40823510 25 - 69331447 I a score=538425.000000 s hg38.chr22_KI270876v1_alt 42455 168 + 263666 gtatccccagcacctagcag----tgcttggcacatagcc-agtgtgccggaaatacgtgttgaatgacgtgaatGTGGCATTGCGTGATAAAAACGGCACTTCAAATGAGTT------------------------------------GGGAAAGGATTTTTATTTGAAAAGTAGTTTACA-TTTCTAGACTCTCCTATGTAGAGAAAT s panTro4.chr22 34420829 168 + 49737984 gtatcctcagcacctagcag----tgcttggcacatagcc-agtgtgccggaaatacgtgttgaatgacgtgaatGTGGCATTGCGTGATAAAAATGGCACTTCAAATGAGTT------------------------------------GGGAAAGGATTTTTATTTGAAAAATAGTTTACA-TTTCTAGACTCTCCTATGTAGAGAAAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30834187 168 + 46535552 gtatccccagcacctagcag----tgcttggcacatagcc-agtgtgccggaaatacatgttgaatgacgtgaatGTGGCACTGCATGATAAAAATGACACTTCAAATGAGTT------------------------------------GGGAAAGGATTTTTATTTGAAAAATAGTTTGCA-TTTCTAGACTCTCCTATGTAGAGAAAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100389229 172 - 115148730 gtatccccagcacctagcaatgcttgcttggcacatagcc-agtgtgctggaaatatgtgttgaatgacatgaatGTGGCATTGCGTGATAAAAATGACACTTCAAATGAGTT------------------------------------GGGAAAGGATTTTTATTTGAAAAATATTTTACA-TTTCTAGACTCTCCTGTGTAGAGAAAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80542005 168 + 95678458 gtatccccagcacctagcag----tgcttggcatatagcc-agtgtgccagaaatacgtgttgaatgacatgaatGTGGCATTGCGTGATAAAAATGACACTTGCAATGAGTT------------------------------------GGGAAAGGATTTTTATTTGAAAGATAGTTTATA-GTTCTAGACTTTCCTATGTAGAGAAAT i rheMac3.chr10 C 0 I 2 s macFas5.chr10 80968857 168 - 96509753 gtatccccagcacctagcag----tgcttggcatatagcc-agtgtgccagaaatacgtgttgaatgacatgaatGTGGCATTGCGTGATAAAAATGACACTTGCAATGAGTT------------------------------------GGGAAAGGATTTTTATTTGAAAGATAGTTTATA-GTTCTAGACTTTCCTATGTAGAGAAAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76223896 168 + 90941950 gtatccccagcacctagcag----tgcttggcatatagcc-AGTGTGTCAGAAACACGCGTTGAATGACATGAATGTGGCATTGCGTGATAAAAATGACACTTCCAATGAGTT------------------------------------GGGAAaggatttttatttgaaagatagTTTATA-GTTCTAGACTTTCCTATGTAGAGAAAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18490870 154 + 33263144 gtatccccagcacctagcag----tgcttggcacgtaacc-agtgtgcc--------------aatgacatgaatGTGGCATTGCATGATAAAAATGACACTTCCAATGAGTT------------------------------------GGGAAAGGATTTTTATTTGAAAGATAGTTTATA-GTACTAGACTTTCCTATGTAGAGAAAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198203537 205 + 210400635 gtatccccagcgcccagtag----tgcttggcacatagca-ggtgtgccggaaatacatgttgaatgatgtgaatGGGGCATTGTGTGACAAAAATGACACTCCAGATGAGTTGGGAAAGGATTTTGTTTTGTTTTTCTTTTCTTTTTAGGGAAAGGATTTTTATTTGAAAAATAGTTTCCATTTTCTAGACTCTTCTATGTAGAGAAAT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40823535 169 - 69331447 GTGGCCCCAGCACCCAGCAG----GGCTGGGCACACTGCAGGGGGGGCCACAGACGGGGCTCGAATGGCACGAGGGCGGCATCCCAGGATACAGGTGACGTTTCAGATGAGTT------------------------------------GGGAAAGGATGTGTATTTGAAAAACAGTTTCTA-TTTCTAGACTCTCTTATTTAGGGACAT i canFam3.chr10 I 25 C 0 a score=4853.000000 s hg38.chr22_KI270876v1_alt 42623 2 + 263666 TA s panTro4.chr22 34420997 2 + 49737984 TA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30834355 2 + 46535552 TA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100389401 2 - 115148730 TA i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 80969025 2 - 96509753 CA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76224064 2 + 90941950 CA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18491024 2 + 33263144 TA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198203742 2 + 210400635 TA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40823704 2 - 69331447 TA i canFam3.chr10 C 0 C 0 e rheMac3.chr10 80542173 2 + 95678458 I a score=225470.000000 s hg38.chr22_KI270876v1_alt 42625 157 + 263666 AATTCCTAGATATAAAAACTGAAACAAGAAAACTGCTACCAAAAAATA-AAGGAGAATTTCGAGATTCATCTTTAAT---------AGAAT-------GACGCGGTAGCAAGGTCACAACCTGAAACCCGGGAAAAGGACACATAAGTGTTTGCCGAAGATGTGAAGGCTCAAA s panTro4.chr22 34420999 157 + 49737984 AATTCCTAGATATAAAAACTGAAACAAGAAAACTGCTACCAAAAAATA-AAGGAGAATTTCGAGATTCATCTTTAAT---------AGAAT-------GACGCGGTAGCAAGGTCACAACCTGAAACCCGGGAAAGGGACACGTAAGTCTTTGCCGAAGATGTGAAGGCTCAAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30834357 157 + 46535552 AATTCCTAGATATAAAAACTGAAACAAGAAAACTGCTACCAAAAAATA-AAGGAGAATTTCAAGATTCATCTTTAAT---------AGAAT-------AACACGGTAGCAAGGTCACAACCTGAAGCCCGGGAAAGGGACACATAAGTCTTTGCCGAAGATGTGAAGGCTCAAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100389403 157 - 115148730 AATTCCTAGATGTAAAAACTGAAACAAGAAAACTGCTACCAAAAAATA-AAGGAGAATTTCGAGATTCATCTTTAAT---------AGAAT-------GACGGGGTAGCAAGGTCACAACCTGAAACCCGGGAAAGGGACACATAAGTCTTTGCCGAAGATGTGAAGGCTCAAC i nomLeu3.chr7b C 0 C 0 s chlSab2.chr19 18491026 155 + 33263144 AATTCCTAGGTATGAAAACTGAAACAAGAAAACTGCTACC-AAAAATA-AAGGAGAATTTCGAGATTAATGTTTAAT---------AGAAC-------GACG-GGTGGCAAGGTCACAAACTGAAACCTGGGAAAGGGGCACGTAAGTCTTTGCCGAAGATGTGAAGGCTCAAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198203744 156 + 210400635 AATTCCTAGATGTAAAAACTGAAACAAAAAAACTGCTACCAAAAAATA-AAGGAGAATTTCAAGACTGATCTTTAAT---------GGAAT-------GACGGGGTAGC-AGGTCACAGCCTGAAACCCGGGAAAGGGACACATAAGCCTTTGCAGAAGATGTGAAGGATCAAA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40823706 167 - 69331447 AATATGCAGCTGTAGAAACTG-------AAAACCACTCCCAGGAAAAATAAGGAGAATTTCAAAACTCCTGTTTAATTTTACAGGAAGTATGGATTAGGACTGGGTAGCAGGGCCACTGCCTGGGATCCTGGAAAGGGACACACCAGCCTTTGCTGACGGTGTGAAGGTTCATA i canFam3.chr10 C 0 I 207 e rheMac3.chr10 80542173 2 + 95678458 I e papAnu2.chr10 76224066 0 + 90941950 C e macFas5.chr10 80969027 0 - 96509753 C a score=75536.000000 s hg38.chr22_KI270876v1_alt 42782 51 + 263666 ------------TGTTCATTCACTCA-TTGTCCATTCAACAGATTTTCATTAAGTGGGGCCTGT-- s panTro4.chr22 34421156 51 + 49737984 ------------TGTTCATTCACTCA-TTGTCCATTCAACAGATTTTCATTAAATGGGGCCTGT-- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30834514 51 + 46535552 ------------TGTTCATTCACTCA-TTGTCCATTCAACAGATTTTCATTAAATGGGGCCTGT-- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100389560 51 - 115148730 ------------TGTTCATTCACTCA-TTGTCCATTCAACAGATTTTCATTAAATGGGGCCGGT-- i nomLeu3.chr7b C 0 C 0 s chlSab2.chr19 18491181 51 + 33263144 ------------CATTCATTCACTCA-TTGTCCATTCAACAGATTTTCGTTAAATGGAGCCTGT-- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198203900 51 + 210400635 ------------CATTCATTCACTCA-TTGTTCGTTCAACAGATTTTCATTAAATGGGGCCTGT-- i calJac3.chr1 C 0 C 0 s canFam3.chr10 40824080 66 - 69331447 cattcattcattcattcattcattcatttgttcgttTGACAGATTTTAATTAACTGAGGATCATGC i canFam3.chr10 I 207 C 0 e rheMac3.chr10 80542173 2 + 95678458 I e papAnu2.chr10 76224066 0 + 90941950 C e macFas5.chr10 80969027 0 - 96509753 C a score=142137.000000 s hg38.chr22_KI270876v1_alt 42833 150 + 263666 GATGGGCCGAGGACTTAGG-AGgtggctccaaatgtgtctgcatgttggaattatct-ggaaactgcaaaaaat------actgatgagtgggtgggtc----------cca----cccccagggactgggctttatttggtctgggatatgacctggattttagacc-tttt s panTro4.chr22 34421207 157 + 49737984 GATGGGCCGAGGACTTAGG-AGgtggctccaaatgtgtctgcatgttggaattatct-ggaaactgcaaaaaatcaaaaaactgatgagtgggtgggtc----------cca----cccccagggactgggctttatttggtctgggatatgacctggattttagaccttttt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30834565 151 + 46535552 GAAGGGCCAAGGACTTAGG-cggtggctccaaatgtgtctgcgtgttggaattatct-ggaaactgcaaaaaat------actgatgagtgggtgggtc----------ccg----cccccagggactgggctttagttggtctggtgtatgacctggattttagaccttttt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100389611 145 - 115148730 GATGGGCCGAGGACTTAGG-AGgtggctccaaatgtgtctgcatgttggaattatct-ggaaactgcaaaaaat------actgatgagtgggtgggtc----------ccg-----ccctggggactgggctttagttggtctgggatatgacctggattttagacc----- i nomLeu3.chr7b C 0 C 0 s chlSab2.chr19 18491232 156 + 33263144 GTTGGGCTGAGGATTTCCG-AGATGGCTCCAAATGCGTctgcatgttggaattatct-ggaaactgcaaaaaat------actgacaagtgggtgggtcccccacttgtcca----cccccggggactgggctttagttggtctggtatatgacctggactttagacc----- i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40824146 156 - 69331447 CAGGGACCCAGGACTTAAACAAGTAtttccaaacttgtctgcaagttggaattgcctgggaaaattcaacaact------actgatgagtggacaggtc----------ctatgtgtctccagggactgggatttcattgatctggggtatggcctggttttggggagtttt- i canFam3.chr10 C 0 I 362 e calJac3.chr1 198203951 0 + 210400635 C e rheMac3.chr10 80542173 2 + 95678458 I e papAnu2.chr10 76224066 0 + 90941950 C e macFas5.chr10 80969027 0 - 96509753 C a score=349059.000000 s hg38.chr22_KI270876v1_alt 42983 434 + 263666 ttttgttttttattttttattttttgagacggagtctcgctctgttgcccaggctggagtgcagtggcgccatcttggctcactgcaagctccgcctcccgggttcacgccattctcctgcctcaatcccccgagtagctgggactacaggcgcccgccacgacgcctggctaattttttgtatttttagtagagacagggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccacccgcctcagcctcccaaagggctgggattacaggcgtgagcaaccgcgcccggccgactttagacatttttaaagatctccaggtaattctgcggtgccgccaagtttgggacccactgCCCTGGGGCGGGAGGGGTTTTCTTCT-----TCTCAAAGCCAATAGAAATTTGCTCTCTGGGGACATAT s panTro4.chr22 34421364 432 + 49737984 ttttgttttttattttttattttttgagacggagtctcgctctgttgcccaggctggagtgcagtgccgccatcttggctcactgcaagctccgcctcccaggttcacgccattctcctgcctcaatcccccgagtagcagggactacag--gcctgccacgacgcctggctaattttttgtatttttagtagagacagggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccacccgcctcggcctcccaaagggctgtgattacaggcgtgagccaccgcgcccggccgactttagacatttttaaagatctccaggtaattctgcggtgccgccaagtttgggacccactgCCCTGGGGCGGGAGGGATTCTCTTCT-----TCTCAAAGCCAATAGAATTTTGCTCTCTGGGGACATAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30834716 432 + 46535552 ttctattttttattttc--ttttttgagacggagtcttgctctgtttcccaggctggagtgcagtggcgcgatctcagctcactgcaagctccacctcccgggttcacgccattctcctgcctcaatcccccgagtagcagggactacaggcgcccgccacgacacctggctaattttttgtatttttagtagagatggggtttcaccgtgttagccaggatggtcttgatctcctgacctcgtgatccacccgcctcagcctcccaaagtgctgggattacaggcgtgagccatcgcgcccggctgactttagacattcttaaagatctccaggtaagtctgtggtgcagcaaagtttgggacccactgCCCTGGGGCGGGAGGGGTTCTCTTCT-----TCTCAAAGCCAATAGAATTTTGCTCTCTGGGGACATAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100389756 434 - 115148730 ttttattttttattttttattttttgagaaggagtctcgctctgttgcccaggctggagtgcaatggcgcaatctcggctcactgcaagctccacctcccaggttcatgccattcctctacctcaatcccccgagtagcaggaactacaggcacccgccatgacgcctggctaattttttgtatttgtagtacagatggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccacccacctcagcctcccaaagtgctgggattacaggcatgagcgactgcgcttggccgactttagacatttttaaagatctccaggtaattctgtggtgcagccaagtttgggacccattgCCCTGGGGAGGGAGGGGTTCTCCTCT-----TCTCAAAACCAATAGAATTTTGCTCTCTGGGGACATAT i nomLeu3.chr7b C 0 C 0 s chlSab2.chr19 18491388 427 + 33263144 tttttttttt---------ttttttgagatggagtcttgctctgtcgcccaggctggagtgcagtggcgcaatcttggctgactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcctgagtagctgggactacaggcgtccacc---acacccagctaattttttgtattttcagtagagacggggtttcaccatgttagccaggatggtctcgatctcctgaccttgtgatccacccacctcggcctcccaaagtgctaggattacaggtgtgagccaccatgcctggccgactttagacatttttaaagatctccaggtaattctgtagtgcagccaagtttgggatccactCTCCTGGGGCAGGAGGGGTTCTCTTCTTATCCTCTCAAAACCGATAGAGTTTTGCTCTCTGGGGACATAT i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40824302 362 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C e rheMac3.chr10 80542173 2 + 95678458 I e papAnu2.chr10 76224066 0 + 90941950 C e macFas5.chr10 80969027 0 - 96509753 C a score=26344.000000 s hg38.chr22_KI270876v1_alt 43417 30 + 263666 TTGAGCTTCTGAACGTCCAGGGGCAGATCT s panTro4.chr22 34421796 30 + 49737984 TTGAGCTTCTGAACGTCCAGGGGCAGATCT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30835148 30 + 46535552 TTGAGCTTCTGAACATCCAGGGGCAGATCT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100390190 30 - 115148730 TTGAGCTTCTGAACATCCAGGGGCAGATCT i nomLeu3.chr7b C 0 C 0 s chlSab2.chr19 18491815 29 + 33263144 TTGAGCTTCTGAACATCCA-GGGCAGATCG i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40824664 19 - 69331447 ttgagc-------cacccagg----GATCC i canFam3.chr10 I 362 C 0 e calJac3.chr1 198203951 0 + 210400635 C e rheMac3.chr10 80542173 2 + 95678458 I e papAnu2.chr10 76224066 0 + 90941950 C e macFas5.chr10 80969027 0 - 96509753 C a score=2376353.000000 s hg38.chr22_KI270876v1_alt 43447 983 + 263666 CTTTCTTGGAAGTTGTAAGACACAGGGACTCATGTTCCACAGGGTCTCGCTCACCTCTCCCCTGGCCTGTTGTGGAGCACCAGCCTAGGCTGGGCCCTGGCGTGGCACTGAGGACACCAAAGAGGACAGTCTGTGCCCCAAGGATGCTTGGCCACCAGCCAGCCCCACCAGCACCAGCAAGAAAGGGGAGACAGGCCCCGGGAAGACACC----GACAATGAGAAGAGGTAA---GTGGGACGCAA----------GGAAGCCAGGAGCTGTGGGAACCCCTGACAGTGAAGTAACCCCTCCTTGGGTGGGTGGGCTTCAGGGAAAGAGAGGGAGGGCCTAACGGGGACAGAGGTTGTTGCTACCTTTCCATCCGGCCACCTGCCACGCCACCTGGTGCCTTTGCCAGTCAGTGAGATCACTGAGCTCTCTCTGTACTTCCTGCCAGATGGGCCATTCGT-------------------TCATTCATGAAGTTAATCAATGCacaaatctcaattgggcacacctctgtgccgggcatcatgccagacctagcagtgaataagacagaaaaGGACTAGGTGTGCAAAGTGAAGAATGACCTCGC--CCAGCCCTGTAATATGTGGGAGCTCAAGTG--AACCCACTGTGGGATCCCTA----AGATGCTGCAGAAGTGAGTAAACTATTTCCTTTCTTTTTTTTTTTTATACCCTAGTTGGTCACCCTGTCACCACTGAACCTTGATTTAACAGAGGCAAAATGCAAGTCTTCCCTGAAGAATACTGGGGGTAGGGAAACTTCTAGTGGCAATGATAAAACCAGCAGCAATGATAATAGAAGGCAAACTTGCAATGGTCTGTGGTAAcccctggggactccagaaatacctggggtggaagagaaatttgcaagagaccaggcttttttgtgtgtacagatggAATTGGAGGCCAAGAAGACCTACGTGTTCATGTTAATTAAGACTGGAGCCGGGACACATTCCAAACTCAT-------GGATTTTCCAAATT s panTro4.chr22 34421826 979 + 49737984 CTTTCTTGGAAGTTGTAAGACACAGGGACTCATGTTCCACAGGGTCTCGCTCACCTCTCCCCTGGCCTGTTGTGGAGCACCAGCCTAGGCTGGGCCCTGGCGGGGCACTGAGGACACCAAAGAGGACAGTCTCTGCCCCAAGGATGCTTGGCCACCAGCCAGCCCCACCAGCACCAGCAAGAAAGGGGAGACAGGCCCCGGGAAGACACC----GACAATGAGAAGAGGTAA---GTGGGACGCAA----------GGAAGCCAGGAGCTGTGGGAACCCCTGACAGTGAAGTAACCCCTCCTTGGGTGGGTGGGCTTCAGGGAAGGAGAGGGAGGGCCTAACGGGGACAGAGGTTGTTGCTACCTTTCCATCCGGCCACCTGCCACGCCACCTGGTGCCTTTGCCAGTCAGTGAGATCACTGAGCTCTCTCTGTACTTCCTGCCAGATGGGCCATTTGT-------------------TCATTCATGAAGTTAATCAATGCacaaatctcaattgggcacacctctgtgccgggcatcatgccagacctagcagtgaataagacagacaaGGACTAGGTGTGCAAAGTGAAGAATGACCTCGC--CCAGCCTTGTAGTATGTGGGAGCTCAAGTG--AA-CCACTGTGGGATCCCTA----AGATGCTGCAGAAGTGAGCAAACTATTTCCTTTC---TTTTTTTTCATACCCTAGTTGGTCACCCTGTCACCACTGAACCTTGATTTAACAGAGGCAAAATGCAAGTCTTCCCTGAAGAATACTAGGGGTAGGGAAACTTCTAGTGGCAGTGATAAAACCAGCAGCAATGATAATAGAAGGCAAACTTGCAATGGTCTGTGGTAAcccctggggactccagaaatacctggggtggaagagaaatttgcaagagaccaggcttttttgtgtgtacagatggagTTGGAGGCCAAGAAGACCTACGTGTTCATGTTAATTAAGACTGGAGCTGGGACACATTCCAAACTCAT-------GTATTTTCCAAATT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30835178 973 + 46535552 CTTTCTTGGAAACTGTGAGACACAGGGACTCATGTTCCACAGGGTCTCGCTCACCTCTCCCCTGGCCTGTTGTGGAGCACCAGCCTAGGCTGGGCCGTGGCGGGGCACTGAGGACACCAAAGAGGACAGTCTCTGCCCCAAAGATGCTTGGCCACCAGCCAGCCCCACCAGCACCAGCAAGAAAGGGGAGACAGGCCCCGGGAAGACACC----GACAATGAGAAGAGGTAA---GTGGGATGCAA----------GGAAGCCAGGAGCCGTGTGAACCCCTGACAGTGAAGTAACCCCTCCTTGGGTGGGTAGGCTTTGGGGAAGGAGAGGGAGGGCCTAACGGGGACAGAGGTTGTTGCTACCTTTCCATCCGGCCACCTGCCACACCACCTGGTGCCTTTGCCAGTTAGTGAGATCACTGAGCTCTCTCTGTACTTCCTGCCAGATGGGCAATTTGT-------------------TCATTCATGAAGTTAATCAATGCacaaatctcaattgggcacacctctgtgccaggcatcatgccagacctagcagtgaataagacagacaaGGGCTAGGTGTGCAAAGTGAAGAATGACCTCGC--CCAGCCCTGTAATATGTGGGAGCTCAAGTG--AACCCACTGTGGGATCCGTA----AGATGCTGCAGAAGTGAGTAAACTATTTCCTTTC---TTTTTTTTTATACCCTAGTTGGTCACCCTGTCACCACTGAACCTTGATTTAAC-GAGGCAAAATGCAAGCCTTCCATGAAGAATACTGGGGGTAGGGAAACTTCTAGTGGCAATGATAAAACCAGCAGCAATGATAATAGAAGGCAAACCTGCAATGGTCTGTGGTAAcccttggggactccagaaatacctggggtggaagagaaatttgcaagagaccaggc-tttttgtgtgtacagatggagCTGGAGGCCAAGAAGACCTACATGTTCATGTTAATTAAAACTGGAGCTGGGACACATTCCAAACTCA------------TTTCCAAATT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100390220 980 - 115148730 CTTTCTTGGAAGCTGTGAGACACAGGGACTCATGTTCCACAGGGTCTCGCTCACCTCTCCCCTGGCCTGTTGCAGAGCACCAGCCTAGGCTGGGCCCTGGCAGGGCACTGAGGACACCAGAGAGGACAGTCTCTGCCCCAAGGATGCTTGGCCACCAGCCAGCCCCACCAGCACCAGCAAGAAAGGGGAGACAGGCCCCGGGAAGACACC----AACAATGAGAAGGGGTAA---GTGGGATGCAA----------GGAAGCCAGGAGCTGTGGGAACCCC-GACAGTGAAGTAACCCCTCCTTGGGTGGGTGGGCTTCGGGGAAGGAGAGGGAGGGCCTAACGGGGACAGAGGTTGTTGCTACCTTTCCATCCGGCCACCTGCCACGCCACCTGGTGCCTTTGCCAGTCAGTGAGATCACTGAGCTCTCTCTGTACTTCCTGCCAGATGGGCCATTCAT-------------------TCATTCATGAAGTTAATCAATGCacaaatctcaattgggtacacctctgtgccgggcatcatgccaggcctagcagtgaataagacagacaaGGGCTAGGTGTGCAAAGTAAAGAATGACCTCGC--CCAGCCCTGTAATATGTGGGAGCTCAAGTG--AACCCACTTTGGGATCCCTA----AGATGCTGCAGAAGTGAGTAAACT-TTTCCTTTCTTTTTTTTTTTTATACCCTAGTTGGTCACCCTGTCACCACAGAACCTTGATTTAACAGAGGCAAAATGCAAGTCTGCCATGAAGAATACTGGAGGTAGGGAAACTTCTAGTGGCAATGATAAAACCAGCAGCAATGATAATAGAAGGCAAACCTGCAATGGTCtgtggcaacccttggggactccagaaatacctggggtggaagagaaatttgcaagagaccagga-tttttgtgtgtacagatggagTTGGAGGCCAAGAAGACCTACATGTTCATGTTAATTAAAACTGGAGCTGGGACACATTCCAAACTCAT-------GTATTTTCCAAATT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80542175 943 + 95678458 CTTTCTTGGAAGCTGTGAGATGCAGAGACTCATGTTCCACAGGGTCTCGCTCACCTCTCCCCTGGCCTGTCATGGAGCACCAGCCTAGTCTGGGCCCTGGCGGGACACCGAGAATACCAAAGAGGACAGTCTCTGCCCCAAGGACACTTGGCCACCAGCCAGCC---------C-----------------CAGGCCCCGGGAAGACACC----GACAGCGAGAAGAGGTAA---GTGGGATGCAA----------GCAAGCCAGGAGCTGTGGGAACCCCTGACAGTGAAGTAACCCCTCCTTGGGTGGGCGGGCCTCGGAGAAGGGAAGGGAGGGCCTAACGGGAAGAGGGGCTGCTGCTAGCTTTCCATCCGGCC-CCTGCCACGCCACCTGGTGCCTTTGCCAGTCATC----TCACGGAGCTCTCTCTCTACTTCCTGCCAGATGGGCCATTCGC-------------------TCATTCATGAGGTT----AATGCacaaatctcaattgggcacacctctgtgccaggcatcatgccaggcctagcagtgaataagacagagaaGGGCTAGGTGTGCAAAGTGAAGAATGATCTCGC--CCCGCCCTGTAATTTCTGGGAGCTCAAGTG--AACCCACTCTGGGATCCCTA----AGAGGCTGCAGAAGTGAGTAAACTATTTCCTTTC---TTTTTTTTTTTACCCTAGTCGGTCACCCTGTCACCATTGAACCTTCATTTAACAGAGGCAAAATGCAAGTCTTTGATGAAGAATAA-GGGGGTAGGGAAGCTTCTAGTGGCAATGATAAAACCAGCAGCAATGATAATAGAAGACAAACCTGCAATGGTTTGTGGTCAcccttggggactccagaaatacctggggtggaagacacatttgcaagagaccaggt-tttttgtgggtacagatggagTTGGAGGCCGAGAAGACCTACATGTTCATGTTAATTAAAACTGGAGCTGGAACACATTCCAAACTCAC-------GTATTTTCCAAATT i rheMac3.chr10 I 2 C 0 s macFas5.chr10 80969027 957 - 96509753 CTTTCTTGGAAGCTGTGAGATGCAGAGACTCATGTTCCACAGGGTCTCGCTCACCTCTCCCCTGGCCTGTCGTGGAGCACCAGCCTAGTCTGGGCCCTGGCGGGACACCGAGAATACCAAAGAGGACAGTCTCTGCCCCAAGGACACTTGGCCACCAGCCAGCCCCACCAGCAC-----------------CAGGCCCCGGGAAGACACCGGTGGACAGCGAGAAGAGGTAA---GTGGGATGCAA----------GCAAGCCAGGAGCTGTGGGAACCCCTGACAGTGAAGTAACCCCTCCTTGGGTGGGCGGGCCTCGGAGAAGGGAAGGGAGGGCCTAACGGGAAGAGGGGCTGCTGCTAGCTTTCCATCCGGCC-CCTGCCACGCCACCTGGTGCCTTTGCCAGTCATC----TCACGGAGCTCTCTCTCTACTTCCTGCCAGATGGGCCATTCGC-------------------TCATTCATGAGGTT----AATGCacaaatctcaattgggcacacctctgtgccaggcatcatgccaggcctagcagtgaataagacagagaaGGGCTAGGTGTGCAAAGTGAAGAATGACCTCGC--CCCGCCCTGTAATTTCTGGGAGCTCAAGTG--AACCCACTCTGGGATCCCTA----AGAGGCTGCAGAAGTGAGTAAACTATTTCCTTTC--TTTTTTTTTTTTACCCTAGTCGGTCACCCTATCACCATTGAACCTTCATTTAACAGAGGCAAAATGCAAGTCTTTGATGAAGAATAA-GGGGGTAGGGAAGCTTCTAGTGGCAATGATAAAACCAGCAGCAATGATAATAGAAGACAAACCTGCAATGGTTTGTGGTCACCCTTGGGGACTCCAGAAATACCTGGGGTGGAAGACACATTTGCAAGAGACCAGGT-TTTTTGTGGGTACAGATGGAGTTGGAGGCCGAGAAGACCTACATGTTCATGTTAATTAAAACTGGAGCTGGAACACATTCCAAACTCAC-------GTATTTTCCAAATT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76224066 950 + 90941950 CTTTCTTGGAAGCTGTGAGACGCAGAGACTCATGTTCCACAGGGTCTCGCTCACCTCTCCCCTGGCCTGTCGTGGAGCACCAGCCTAGTCTGGGCCCTGGCGGGACACCGAGAATACCAAAGAGGACAGTCTCTGCCCCAAGGACACTTGGCCACCAGCCAGCCCCACCAGCAC-----------------CAGGCCCTGGGAAGACACC----GACAGCGAGAAGAGGTAA---GTGGGATGCAA----------GCAAGCCAGGAGCTGTGGGAA-CCCTGACAGTGAAGTAACCCCTCCTTGAGTGGGCGGGCCtcggagaagggaagggagggcctAACGGGAAGAGGGGCTGCTGCTAGCTTTCCATCCGGCC-CCTGCCACGCCACCTGGTGCCTTTGCCAGTCATC----TCACGGAGCTCTCTCTGTACTTCCTGCCAGATGGGCCATTCGC-------------------TCATTCATGAGGTT----AATGCACAAATCTCAATTGGGCAcacctctgtgccaggcatcatgCCAGGACTAGCAGTGAATAAGACAGAGAAGGGCTAGGTGTGCAAAGTGAAGAATGACCTCGC--CCCGCCCTGTAATTTCTGGGAGCTCAAGTG--AACCCACTGTGGGGTCCCTA----AGAGGCTGCAGAAGTGAGTAaactatttcctttc----ttttttttttaccctaGTCGGTCACCCTGTCACCATTGAACCTTCATTTAACAGAGGCAAAATGCAAGTCTTTGATGAAGAATAA-GGGGGTAGGGAAGCTTCTAGTGGCAATGATAAAACCAGCAGCAATGATAATAGAAGACAAACCTGCAGTGGTTTGTGGTCACCCTTGGGGACTCCAGAAATACCTGGGGTGGAAGACACATTTGCAAGAGACCAGGT-TTTTTGTGGGTacagatggagttggaggccGAGAAGACCTACATGTTCATGTTAATTAAAACTGGAGCTGGAACACATTCCAAACTcat-------gtattttccaaatt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18491844 950 + 33263144 CTTTCTTGGAAGCTGTGAGACGCAGAGACTCATGTTCCACAGGGTCTCGCTCACCTCTCCCCTGGCTTGTCGTGGAGCACCAGCCTAGTCTGGTCCCTGGTGGGGCACTGAGAACACCAAAGAGGACAGTCTCTGCCCCAAGGACACTTGGCCACCGGCCAGCCCCACCAGCAC-----------------CAGGCCCCGGGAAGACACA--------GTGAGAAGAGGTAA---GTGGGATGCAA----------GCAAGCCAGGAGCTGTGGGAACCCCTGACAGTGAAGTAACCCCTCCTTGGGTGGGCGGGCCTTGGAGAAGGGAAGGGAGGGCCTAACGGGGAGAGGGGCTGCTGCTACCTTTCCATCTGGCA-CCTGCCACGCCACCTGGTGCCTTTGCCAGTCATC----TCACGGAGCTCTCTCTGTACTTCCTGCCAGATGGTCCattcgt-------------------tcattcatgaagtt----aatgcacaaatctcaattgggcacacctctgtgccaggcatcatgccaggcctagcagtgaataagacagacaaGGGCTAGGTGTGCAAAGTGAAGAATGACGTCGC--CCAGCCCTGTAATTTCTGGGAGCTCAAGTG--AACCCACTGTGGGATCCCTA----AGAGGCTGCAGAAGTGAGTAAACTATTTCCTTTC-TTTTTTTTTTTTTACCCTAGTCAGTCACCCTGTCACCATTGAACCTTCATTTAACAGAGGCAAAATGCAAGTCTTTGATGAAGAATAA-GGGGGTAGGGAAGCTTCTAGTGGCAATGATAAAACCAGCAGCAATGATAATAGAAGACAAACCTGCAACAGTTTGTGGTCACCCTTGGGGACTCCAGAAATACCTGGGGTGGAAGACACATTTGCAAGAGACCAGGT-TTTTTGTGGGTACAGATGGAGTTGGAGGCCGAGAAGACCTACATGTTCATGTTAATTAAAACTGGAGCTGGAACACATTCCAAACTCAT-------GTATTTTCCAAATT i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40824683 883 - 69331447 ---------------------CCTAGGATTCATATCCTAAAGGGCCTGGCCTGCCTTCCCCCTTGCCTGTCACAGAGTACAAGCTCAGGTCAG--CTTGAGGGAAGAC-----------------ACAGTCTCTGTTCTAACGGCCATGGGGACCCAGCAAGA----------------------------GAGACCCAGACAAGCCATT----AACGAGAAAGAGAGGTAAACGGTAGGACACGAAGATAATGGGGTATGGCAGGGGCCGCTCCAGGCTCTCACA------------CCTGCGGGGTGGGCAGACT------------------------GCGGGGAGGGAAGCTGATGC-----CTCCAAGCGTT--CCTG-------GGCTTGTGTCTTTGCCACTCACC----TCCCTGAGCCCTGTGCGCACC-----CCGGCTGGTGCATTTGCAGCCCGGGGGGGGGGGGGGTCGTTCGCGAAGCTGGTAGATGCACAGACTCTCACTGAG--CACCTCTGTGCCCTGCAGCACGCTAGGCCCGGCCGCGCACGGGACACACAAGGATGGGGCACGGGAAGCAAA-AATGCCACCAATGCCAGCTCCTGCATGTCTAGACGCCCAGGGGCCAACCTTCGGGAAGGTCCCAATGGTTGGTGCCACGGAAGTGAGTAAACTTACTCCTTTT-CCCTTTCCGCTGGACCTTGTCTAG-----CTGCCTCCAGGGAACCCCGGTTTAGCAGAGGCAAAATACAAGTCTCCCACTACGAAAACTCCGGGTCGGGAGATTTCTGCTTGCAACGATTG----------AATGATGATAGAAGGAAGACCTGCAGGGGCCCAGGACAATCCCTGGGGACTCCAGAAACGCTTGGGTTGGGAAGGAAGTTTCTGAGAGACAGGAT-TTTCTGTGTGAACAGATGGGCTTGGAGGCCAAGAAGGCCTAAATATTCATGCTAATTTAGGCTGAGCTTGGGCCACATTTAGAATACCTCTTTTCCGatttttttaaatt i canFam3.chr10 C 0 I 271 e calJac3.chr1 198203951 0 + 210400635 C a score=1647540.000000 s hg38.chr22_KI270876v1_alt 44430 674 + 263666 GTATGTAACTACAT------------------AGTACCTTT-------------ATAATGAAAATGAAAAAAGTTT----TAAACTATCACCTGCCACTCCTCCCCCTCTT---------------CCCTCCTGTCATCTGTCATGACTCTGCAAGTCAACACCTTTGCATGGAGACTGTTGCTCAAGCTAAGATCCATTCTCCATTTCCAGGGCCCTGCAATGACAAGTTAATGATTTGAGAAAAGCTGTTATTGAGAGAAAACTATCCCtttactgtagcataatttataatcatgaaaaatatggagccattaaaatgttctaacactagggaactggttacatacaaaatattcatccacttgataaaacactacat----------agctgtcagaaatgatgctcac-----tcaatgactgggttaacgtggaaaatgttgattgtattattaggtggaaaagagcaA-----GG----------------ACTTTCTTACCTTTTACCTAAGGGGAAACACATCTCTCAAACTTGTGTGTAGGAAAACAAAACCCCTTAAAGGAATACAGCAAGGTCACAATGCAGCTG--TTTATTTAGAGGTAAATTTGGTGATTCCTTCCCCTCTTCTTTCTGCCTTTCTGTGTTTTTCAAGTT-TTCAGTTATGCACATTACAGTTTTAT-AAAATAGAAGGAATATAGATAATAAATATTTACATCAAATCTAAAATAAAATGTTTA------AAAAGAGGACAAAC s panTro4.chr22 34422805 673 + 49737984 GTATGTAACTACAT------------------AGTACCTTT-------------ATAGTGAAAATGAAAAAATTTT----TAAACTATCACCTGCCACTCCTCCCCC-CTT---------------CCCTCCTGTCATCTGTCATGACTCTGCAAGTCAACACCTTTGCATGGAGACTGTTGCTCAAGCTAAGATCCATTCTCCATTTCCAGGGCCCTGCAATGACAAGTTAATGATTTGAGAAAAGCTGTTATTGAGAGAAAACTATCCCtttactgtagcataatttataatcatgaaaaatatggagccattaaaatgttccaacactagggaactggttacatacaaaatattcgtccacttgataaaacactacgt----------agctgtcagaaatgatgctcac-----tcaatgactgggctaacgtggaaaatgttgattgtattattaggtggaaaagagcaA-----GG----------------ACTTTCTTACCTTTTACCTAAGGGGAAACACATCTCTCAAACTTGTGTGTAGGAAAACAAAACCCCTTAAAGGAATACAGCAAGGTCACAATGCAGCTG--TTTATTTAGAGGTAAATTTGGTGATTCCTTCCCCTCTTCTTTCTGCCTTTCTGTGTTTTTCCAGTT-TTCAGTTATGCACATTACAGTTTTAT-AAAATAGAAGGAATATAGATAATAAATATTTACATCGAATCTAAAATAAAATGTTTA------AAAAGAGGACAAAC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30836151 674 + 46535552 GTATGTAACTACAT------------------AGTACCTTT-------------ATAATGAAAATGAAAAAACTTT----TAAACTATCACCTGCCACTCCTCCCCCTCTT---------------CCCTCCCATCATCTGTCATGACTCTGC-AGTCAACACCTTTGTGTGGAGACTCTTGCTCAAGCTAAGATCCATTCTCCATTTCCAGAGCCCTGCAATGACAAGTTAATGATTTGAGAAAAGCTGTTATTGAGAGAAAATCATCCCtttactgtagcataatttataatcctgaaaaatgtggagccattaaaatgttccaacactagggaactggttacatacaaaatattcatccacttgataaaacactatgt----------agctgtcagaagtgacgctcac-----tcaatgactgggttgacgtggaaaatgttgattgtattattaggtggaaaagagcaa-----gg----------------ACTTTCTTACCTTTTACCTAAGGGGAAACACATCTCTCAAACTTGTGTGTAGGAAAACAAAACCCCTTAAAGGAATACAGCAAGGTCACAATGCGGCTA--TTTATTTAGAGGTAAATTTGGTGATTCCTTCCCCTCTTCTTTCTGCCTTTCTGTGTTTTTCAAGTTCTTCAGTTATGCACATTACTGTTTTAT-AAAATAGAAGGAATATAGATAATAAATATTTACATCAAATCTAAAATAAAATGTTTA------AAAAGAGGACAAAC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100391200 665 - 115148730 GTATGTAACTACAT------------------AGAACCTTT-------------ATAATGAAAATGAAAAAATTTT----TAAACTATCACCTGCCACTCCTCCCCCTCTT---------------CCCTCCTGTCATCTGTCATGACTCTGC-AGTCAACA-CTTTGCGTGGAGACTGTTGCTCAAGCTAAGATCCATTCTCCATTTCCAGGGCCCTGCAATGACAAGTTAATGATTTGAGAAAAGCTGTTATTGAGAGAAAATCATCCCtttactgtaacataatttataatcatgaaaaatgtggagccattaaaatgttccaacactagggaactggttacatacaaaatattcatccacttgataaaacactatgt----------agctgtcagaaatgaggctcac-----tcaatgactgggttaacgtggaaaatgttgattgtattattaggtggaaaaggACCACATTGGA----------------GCTTGCTAACTCCTTCTC------------CTTCTCTCAAACTTGTGTGTAGGAAAACAAAACCCCTTAAAGGAATACAGTAAGGTCATAATGCGGCTA--TTTATTTAGAGGTAAATTTGGTGATTCCTTCCCCTCTTCTTTCTGCCTTTCTGTGTTTTTCAAGTT-TTCAGTTATGCACATTACTGTTTTAT-AAAATAGAAGGAATATAGATAATAAATATTTACATCAAATCTGAAATAAAATGTTTA------AAAAGAGGACAAAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80543118 669 + 95678458 GTATGTAACTACAT------------------AGTACCTTC-------------ATAATGAAAATGAAAAACTTTT----TAAACTATCACCTGCCCCTCCTCCCCCTCTT---------------CCCTCCTGTCATCTGTCATGACTCTGC-AGTCAGCACCTTTGCGTGGAGACTGTTGCTCAAGCTAAGATCCATTCTCCATTCCCAGGGTCTTGCAATGACAAGTTAATGATTTGAGAAAAGCTGTTATTGGGAGAAAATCATCCCtttactgtagcataatttataatcatgaaaaatgtgaagccattaaaatgttccaatgctagggaactggttacatacaaaatattcatccacttgataaaacactaggt----------agctgtcagaaatgatgCTCCT-----TCAATGACTGGGTTCACGGGGAAAGTGCTACTTGTATTATTCGGTGGAAAAGAGCAG-----GG----------------ACTTTCTTACCTTTTACCTAA-GGAAAGCACATCTCTCAAACTTGTGCATAGGAAAACAAAACCCTTCAAAGGAGTACAGCAAGGTCACAGTGTGGCTG------TTCAGGGGTAAATTTGGTGATGTGTTCCCCTCTTCTTTCTGCCTTTCTGTGTTTTTCAAGTT-TTCAGTTATGCACATTACTGTTTTATAAAAATAGAAGGAATATAGATAATAAATATTTACAGCAAATCTAAAATAAAATGTTTA------AACACAGGACAAAC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80969984 668 - 96509753 GTATGTAACTACAT------------------AGTACCTTC-------------ATAATGAAAATGAAAAACTTTT----TAAACTATCACCTGCCCCTCCTCCCCCTCTT---------------CCCTCCTGTCATCTGTCATGACTCGGC-AGTCAGCACCTTTGCGTGGAGACTGTTGCTCAAGCTAAGATCCATTCTCCATTCCCAGGGTCTTGCAATGACAAGTTAATGATTTGAGAAAAGCTGTTATTGGGAGAAAATCATCCCtttactgtagcataatttataatcatgaaaaatgtgaagccattaaaatgttccaatgctagggaactggttacatacaaaatattcatccacttgataaaacactaggt----------agctgtcagaaatgatgctcct-----tcaatgactgggttcacggggaaagtgctacttgtattattcggtggaaaagagcag-----gG----------------ACTTTCTTACCTTTTACCTAA-GGAAAGCACATCTCTCAAACTTGTGCATAGGAAAACAAAACCCTTCAAAGGAGTACAGCAAGGTCACAGTGTGGCTG------TTCAGGGGTAAATTTGGTGATGTGTTCCCCTTTTCTTTCTGCCTTTCTGTGTTTTTCAAGTT-TTCAGTTATGCACATTACTGTTTTAT-AAAATAGAAGGAATATAGATAATAAATATTTACAGCAAATCTAAAATAAAATGTTTA------AACACAGGACAAAC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76225016 666 + 90941950 gtatGTAACTACAT------------------AATACCttc-------------ataatgaaaatgaaaaaatttt----taaactatcacctgcccctcctccccctctt---------------ccctccTGTCATCTGTCATGACTCTGC-AGTCAGCACCTTTGCGTGGAGACTGTTGCTCAAGCTAAGATCCATTCTCCATTCCCAGGGTCTTGCAATGACAAGTTAATGATTTGAGAAAAGCTGTTATTGGGAGAAAATCATCCCTTTACtgtagcataatttataatcatgAAAAATGTGAAGCCATTAAAATGTTCCAATGCTAGGGAACTAGTTACATACAAAATATTCATCCACTTGATAAAACACTAGGT----------AGCTGTCAGAAATGATGCTCCC-----TCAATGACTGGGTTCACGGGGAAAGTGCTGCTTGTATTATTAGGTGGAAAAGAGCAG-----GG----------------ACTTTCTTACCTTTTACCTAA-GGAAAGCACATCTCGCAAACTTGTGCGTAGGAAAACAAAACCCTTCAAAGGAGTACAGCAAGGT--CAGTGTGGCTG------TTCAGGGGTAAATTTGGTGATGTGTTCCcctcttctttctgcctttctgtgtTTTTCAAGTT-TTCAGTTATGCACATTactgttttat-aaaatagaaggaatatagataataaatatttacagcaaatctaaaataaaatgttta------aacacaGGACAAAC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18492794 668 + 33263144 GTATGTAACTACAT------------------AGTACCTTC-------------ATAATGAAAATGAAAACAATTT----TAAACTATCACCTGCCCCTCCTTCCCCTCTT---------------CCCTCCTGTCATCTATCGTGACTCTGC-AGTCAACACCTTTTCGTGGAGACTGTTGCTCAAGCTAAGATCCATTCTCCATTCCCAGGGTCTTGCAATGACAAGTTAATGATTTGAGAAAAGCTGTTATTGGGAGAAAATCATCCCtttactgtagcataatttataatcatgaaaaatgtgaagccattaaaatgttccaatgctagggaactggttacatacaaaatattcatccacttgataaaacactaggt----------agctgtcagaaatgatgctccc-----tcgatgactgggttcacggggaaagtgttgcttgtattattaggtggaaaagaacag-----GG----------------ACTTTCTTACCTTTTACCTAA-GGAAAGCACATCTCGCAAACTTGTGCATAGGAAAACAAAACCCTTCAAAGGAATACAGCAAGGTCATGGTGTGGCTG------TTCAGGGGTAAATTTGGTGATGTGTTCCCCTCTTCTTTCTGCCTTTCTGTGTTTTTCAAGTT-TTCAGTTACGCACATTACTGTTTTAT-AAAATAGAAGGAATATAGATAATAAATATTTACAGCAAATCTAAAATAAAATGTTTA------AACACAGGACAAAC i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40825837 687 - 69331447 gcatgtgacttgatctcgggattgtaaattccagcccctctttgggtgTAGACATTACCGAAAATGAAA---TCTTAAAATAAACTCTGATTTGTAACTCCTTCTCCCCTTCACCTCTGCCCTTACCCCTTCTCTCATCAGCCCAGACTCAGG-GGTC-----TTTGGCCTGCAGTCCATTTCTCACGCCCAGATTCGACCTCCATCCCCAGAGCCCTGCaaagaagagtcagagatttgtgaaaggatgttact----gaaagttatcccttca-tgctgcagaatttatagttgtgacaaactggacacggttaacatggtccagcgctaggagactggtcaaagac-acctgttcctccacttgagagaactttaggttacgtacctaacctattaaaaa-ggtgttcccaagagccagtcattggattagtatggaaaacatctatgccaactttgg--tgagaaaagcag-----gataaaagtgccatatacaCTTGTTCACCTCGTATCTAA-------------------------GCGGGGGAGA-------------------CAGAGTAAGGCCCCCG-GCAGCCCCCTCTATCTGGAGG-GGATGTGGTTATGTTTTCC----TTCTTTCCGCCTGTCTATACTTGTCAAGTT-TTCTATTAGGCGCACTACTGTTTTAT-GAAATGGAAAGA--ATAGATGATAAGTATTGACATC------AAAATAACAGATTTGTTTTACAAAGGAAGACCAAC i canFam3.chr10 I 271 I 1750 e calJac3.chr1 198203951 0 + 210400635 C a score=570124.000000 s hg38.chr22_KI270876v1_alt 45104 255 + 263666 TCAgccgggtgcggaggctcacgtctgtaatcccagcactttgggaagccgaggtgggcagatcacgagatcaggagattgagaccagcctggccaacgtggtgaaactccatctctactaaaaaatacaaaaaattagctgggtgtggtggcgggtgcctgtagtcccagctactcacgaggctgaggcaggagaatcgcttgaacccaggaggtagaggttgcagtgagccgagatcgtgccactgcactcca s panTro4.chr22 34423478 255 + 49737984 TCggccgggtgcggaggctcacgtctgtaatcccagcactttgggaagccgaggtgggcagatcacgagatcaggagattgagaccagcctggccaacgtggtgaaactccatctctactaaaaaatacaaaaaattagctgggtgtggtggcgggtgcctgtaatcccagctactcacgaggctgaggcaggagaatcgcttgaacccaggaggtagaggttgcagtgagccgagatcgtgccactgcactcca i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30836825 254 + 46535552 TCggccgggcgcagaggctcacgtctgtaatcccagcactttgggaagccgagataggcagatcatgagatcaggagattgagaccagcctggccaacatgatgaaactccatctctact-aaaaatacaaaaaattagctgggcgtggtggcgggcgcctgtagtcccagctactcacgaggctgaggcaggagaatcgcttgaacccaggaggtagatgttgcagtgagccgagattgtgccactgcactcca i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100391865 254 - 115148730 TTggccgggcgcggtggctcacgtctgtaatcccagcactttgggaagccaggatgggcagttcacgagatccggagattgatacccgcctggccaacatggtgaaactccatctctgct-aaaaatacaaaaaattggctgggcgtggtggggggcgcctgtagtcccagctactcgcgaggctgaggcatgagaatcgcttgaacccatcaggtagaggttgcagtgagctgacataaagccactgcactcca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80543787 254 + 95678458 TTgaccaggcgcagtggctcacgtctgtaatctcagcactttgggaggccgaggtaggcagatcactagatcaggagtccgagaccagcctggccaacacggtgaaaccccatctctttt-aaaaatacaaaaaattatctgggtggggtggcacgcacctgtagtcccagctacttgggaggctgaggccggagaatcgcttgaacccaggaggtagaggttgcagtgaactgagatcatgccattgcactcca i rheMac3.chr10 C 0 I 223 s macFas5.chr10 80970652 254 - 96509753 TTgaccaggcgcagtggctcacgtctgtaatctcagcactttgggaggccgaggtaggcagatcactagatcaggagtccgagaccagcctggccaacacggtgaaaccccatctctttt-aaaaatacaaaaaattatctgggtggggtggcacgcacctgtagtcccagctacttgggaggctgaggccggagaatcgcttgaacccaggaggtagaggttgcagtgaactgagatcatgccattgcactcca i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76225682 254 + 90941950 tcgaccaggcgcagtggctcacgtctgtaatctcagcactttgggaggccgaggtgggccgatcacgagatcaggagtccgagaccagcctggccaacacggtgaaaccccatctctttt-aaaaatacaaaaaattatctgggtggggtggcacgcacctgtagtcccagctacttgggaggctgaagcaggagaatcgcttgaacccaggaggtagaggttgtagtgagctgagatcatgccattgcactcca i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18493462 254 + 33263144 TCgaccaggcgcagtggctcacgtctgtaatctcagcactttgggaggccgaggtgggcagatcacgagatcaggagttcgagaccagcctggccaacacggtgaaaccccatctctttt-aaaaatacaaaaaattatctgggtgtagtggcacgcacctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgaacccaggaggtagaggttgcagtgagccgagattgtgccactgaactcca i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40826524 1750 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C a score=29867.000000 s hg38.chr22_KI270876v1_alt 45359 36 + 263666 acct-ggcaac-agagggagactccatctc--aaaaaaaa s panTro4.chr22 34423733 34 + 49737984 acct-ggcaac-agagggagactccatctc----aaaaaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30837079 35 + 46535552 acct-ggcaac-agagggagactccatctc---aaaaaaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100392119 38 - 115148730 acct-ggcaac-agagggagactccatctcaaaaaaaaaa i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 80970906 38 - 96509753 gcatgggcaacaagaatgaaattctgtctc--TTAATAAA i macFas5.chr10 C 0 I 173 s papAnu2.chr10 76225936 38 + 90941950 gcatgggcaacaagaatgaaattctgtctc--ttaATAAA i papAnu2.chr10 C 0 I 173 s chlSab2.chr19 18493716 28 + 33263144 gcgt-ggcaac-agagggagacttcctctc---------- i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40826524 1750 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C e rheMac3.chr10 80544041 223 + 95678458 I a score=191662.000000 s hg38.chr22_KI270876v1_alt 45395 231 + 263666 aaaaaaaaaaaGAggttgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggcagatcacgaggtcaggagattgagaccatcctggctaacacggtggaacactgtctctactaaaaatacaaaaaatgagctgggcgtcgtggcgggcacctgtagtcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcagagg s panTro4.chr22 34423767 231 + 49737984 aaaaaaaaaaaGAggtcgggcgccgtggctcacgcctgtaatcccagcactttgggaggccgaggcaggcagatcacgaggtcaggagattgagaccatcctggctaacacggtggaaccctgtctctactaaaaatacaaaaaattagctgggcgtcgtggcgggcacctgtagtcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcagagg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30837114 231 + 46535552 aaaaaaaaaaaGAggctgggtgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggcggatcacgaggtcaggagattgagaccatcttggctaacacagtggaaccccatctctactaaaaatacaaaaaattagctgggcgtggtggcaggcacctgtagtcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcagagg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100392157 231 - 115148730 aaaaaaaaaaaGAggccgggtgcggtggctcacacctgtaatcccggcactttgggagtctgaggcgggcagatcacgtggtcaggagattgagaccatcctggctaacacggtgaaacactgtctctactaaaaatacaaaaaattagctgggcgtggtggcaggcatccatagtcccagctactcgggaggctgaggcaggagaattgcctgaacccgggaggcagagG i nomLeu3.chr7b C 0 I 281 s chlSab2.chr19 18493744 229 + 33263144 --aaaaaaaaaGAggccgggtgcggtagctcaagcctgtaatcccagcactttgggaggctgaggcggcctgatcacgaggtcaagagattgagaccatcctggctaacacggtagaaccccgtctctactaaaaatactaaaaactagccgggcgtggtggcaggtgtgtatagtcccagctactcgggaggctgaggcaggagaatagcgtgaacctgggaggcggagc i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40826524 1750 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C e rheMac3.chr10 80544041 223 + 95678458 I e papAnu2.chr10 76225974 173 + 90941950 I e macFas5.chr10 80970944 173 - 96509753 I a score=67.000000 s hg38.chr22_KI270876v1_alt 45626 1 + 263666 c s panTro4.chr22 34423998 1 + 49737984 c i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30837345 1 + 46535552 t i ponAbe2.chr22 C 0 C 0 s chlSab2.chr19 18493973 1 + 33263144 t i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40826524 1750 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C e rheMac3.chr10 80544041 223 + 95678458 I e papAnu2.chr10 76225974 173 + 90941950 I e macFas5.chr10 80970944 173 - 96509753 I e nomLeu3.chr7b 100392388 281 - 115148730 I a score=187592.000000 s hg38.chr22_KI270876v1_alt 45627 251 + 263666 tgcagtgagctgaggtcgcgccactgcagtccagcctgggtgacagagcaaggctctgtctcgaaacaacaacaacaaccaaaaaGGACAACCTCATAGTCAGCGGGTCTTCATTTATTAATAGCTTTGTTAGTTGCTTGAGTGCATGCAGACTCCTTCTCATCACAGAACAAGGCAACAGTGGAAGAATGGGTGTTTCCACAGAAGACCACCCCATGGTTGTTAGCAATGGCTGGAAAGCGTAGGGAGCC s panTro4.chr22 34423999 248 + 49737984 tgcagtgagctgagatcgcgccactgcagtccagcctgggtgacagagcaaggctctgtctcaa---aacaacaacaaccaaaaaGGACAACCTCATAGTCAGCGGGTCTTCATTTATTAATAGCTTTGTAAGTTGCTTGAGTGCATGCAGACTCCTTCTCATCACAGAACAAGGCAACAGTGGAAGAATGGGTGTTTCCACAGAAGACCACCCCATGGTTGTTAGCAATGGCTGGAAAGCGTAGGGAGCC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30837346 251 + 46535552 tgcagtgagctgagattgagccactgcagtccagcctgggcgacagagcgagactctgtctcgaaaCAGCAACAACAACCAAAGAGGACAAACTCATAGTCAGCAGGTCTTCATTTATTAATAGCTTTGTAAGTTGCTTGAGTGCATGCAGACTCCTTCTCATCATGGAACAAGGCAACAGTGGAAGAATGGGTGTTTCCACAGAAGACCACTCCATGGTTGTTAGCAGTGGCTGGAAAGCGTAGGGAGCC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100392669 244 - 115148730 tgcagcgagctgagatcgcgccactgcagtccagcctgggcgacagag-------ttgtctcgaaacaacaaCGACAACCAAACAGGACAGACTCATAGTCAGCGGGTCTTCATGTATTAATAGCTTTGTAAGTTGCTTGAGTGCATGCAGACTCCTTCTCATCACGGAACAAGGCAACAGTGGAAGAATGGCTGTTTCCACGGAAGACCACCCCATGGTTGTTAGCAATGGCTGGAAAACGTAGGGAGCC i nomLeu3.chr7b I 281 C 0 s chlSab2.chr19 18493974 221 + 33263144 tgcagtgagctgagatcgcgccaccgcactccaccctgggtgacagcgcgagactctgtctcaa---aacaaCAGCAACAGAAGAGGACAAACTCATAGTCAGCGGGTCTTCATG-----------------------TGAGTGCACGCAGACTC---CGCATCACGGAACAAGGCAACAGTGGGAGAATGGGTGTTTCCACGGAAGACCACTCCATGG-TGTTAGCAATGGCTGGAAAGTGTAGGGAGCC i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40826524 1750 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C e rheMac3.chr10 80544041 223 + 95678458 I e papAnu2.chr10 76225974 173 + 90941950 I e macFas5.chr10 80970944 173 - 96509753 I a score=1444020.000000 s hg38.chr22_KI270876v1_alt 45878 1453 + 263666 TCCAGCccatctgtccatccacccatccatccatccaAA----------------ACCA---AAAaggcattgttctaggca-ctggggaaaagcagtaaacaaaatg-aatcctgccttcacgaagttttcattctcaaggtggaggcaggggaacacggaaaagaaacacagtaaa-tcagtgttacggtgtattataaagtaatgagtgttggggagaaaaataagtttgggaaggagttatacagaattgttggatggggcaggagc----------------------------------acagtttcaaataggatcatcggggcatgcctctctgagaggctgatcttccagcaaagacgtgaaggaggtgag------------------------ggtgtctgggagaagagcattccagatggagggagcagcaagggcaaacacctgcttgtgacgttcagggggccgcaggtgggg---------cgccgtgcggggaacagagggagg--cgggggaatgggaagggagggtaggagaggaggctggagagagagctggaggccaaaag-tgcagggtcttaga-gctacagtaaggatttgggcttgtact-----ctgagtgaggcggggacaca-tgggggatttcaggcagtggagttacctaa--tggcttagattttaggaggatcactctggctgctgtgctgagaggagaccgca-agacaaggcgatgccagggatatctgttagcaaatgttggaaacaacc--ctctggagaggggatggtgacctgaaccagtgtggtggcaacagaggtggtgagaagtggtcagattttggatctgttctgaagggagagcccacaggatttgttcatggactggacctgtggtgtgagggaaagaagagccaggataac-g-gggggttgtggcctgagcaactggcgggatggagctgttggcacctgaaat-ggacaggtgggagccgga---gtggggtgagagcaaggtgctcagggtggacgtgtcacgtttgtgatgcccaaagacacatgcaaggggaggtgctgagtaggtgatgagatccatgcatcc-gattcaagatgtggggtctccaacaacaaattagtcggagatacaaatttgtaaatagatggtatgtaaaaccgtaagagtgggtaagattatcaaaagagtgaacacaggtccga--gaaatatgtcgaaggcca--gcccctgggcaccccagcttgaagagaatgtggagagcaggggaaccctcaaaggagactgagaaggaagcagccactgagg--gaagaggggcaccaggagt-gggtgtccaggaaaccaagtgaggaaagcctgaaagtgcagaagtgatacaccggaccagtgctgcggacaggtcaaggacaggagaatcgatctgatttagcaacatgaagaccactgatggcctcgatgagagcagttatggtgaagtggctgacgacaaaaagcctgaatggagaagttttaaaagaaggcagaaagaggctgggcgcgg s panTro4.chr22 34424247 1453 + 49737984 TCCAGCccatctgtccatccacccatccatctatccaAA----------------ACCA---AAAaggcattgttctaggca-ctggggaaaagcagtaaacaaaatg-aatcctgccttcacgaagttttcattctcaaggcggaggcaggggaacacggaaaagaaacacagtaaa-tcagtgttacggtgtattataaagtaatgagtgttggggagaaaaataagtttgggaaggagttatacagaattgttggatggggcaggagc----------------------------------acagtttcaaataggatcatcggggcatgcctctctgagaggctgatcttccagcaaagacgtgaaggaggtgag------------------------ggtgtctgggagaagagcattccagatggagggagcagcaagggcgaacacctgcttgcgacattcagggggccgcaggtgggg---------tgccgtgccgggaacagagggagg--cgggggaatgcgaagggagagtaggagaggaggctggagagagagctggaggccaaaag-tgcagggtcttaga-gctacagtaaggatttgggcttctact-----ctgagtgaggtggggacaca-tgggggatttcaggcagaggagttacctaa--tggcttagattttaggaggatcactctggctgctgtgctgagaggagaccgca-ggacaaggcgatgccagggatatctgttagcaaatgttggaaacaacc--ctctggagaggggatggtgacctgaaccagtgtggtggcaacagaggtggtgagaagtggtcagattttggatctgttctgaagggagagcccacaggatttgttcatggactggacctgtggtgtgagggaaagaagagccaggataac-g-gggggttgtggcctgagcaactggcgggatggagctgttggcacctgaaat-ggacaggtgggagccgga---gtggggtgagagcaaggtgctcagggtggacgtgtcacgtttgtgatgcccaaagacacatgcaaggggaggtgctgagtaggtgatgagatccatgcatcc-gattcaagatgtggggtctccaacaacaaattagtcggagatacaaatttgtaaatagatggtatctaaaaccgtaagagtgggtaagattatcaaaagagtgaacacaggtctga--gaaatatgtcaaaggcca--gcccctgggcaccccagcttgaagagaatgtggagagcgggggaaccctcaaaggagactgagaaggaagcagccactgagg--gaagaggggcaccaggagt-gggtgtccaggaaaccaagtgaggaaagcctgaaagtgtaaaagtgatacaccggaccagtgctgcggacagatcaaggacaggagaatcgatctgatttagcaacatgaagaccactgatggcctcgatgagagcagttatggtgaagtggctgacgacaaaaagcctgaatggagaagttttaaaagaaggcagaaagaggctgggcgcgg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30837597 1479 + 46535552 TCCAGCccatctgtccatccacccatccatccatccaAA----------------ACCA---AAAaggcattgttctaggca-ctggggaaaagcagtaaacaaaaca-aatcctgcctttgcgaagttttcattctcaaggcagaggcaggggaacacggaagagaaacacaataaa-tcagtgttacagtgtattataaagtaatgagtgttggggagaaaaataagtttgggaaggagttatacagag-cgtaggatggggcaggagc----------------------------------acagtttcaaataggatcatcggggcacgcctctctgagaggctgatcttccagcaaagacatgaaggaggtgagggtatctgggagaatacccatgaaggtatctgggagaagagcattccagatggagggagcagcaagggcaaacacctgcttgggatgttcagggggccgcaggtgggg---------tgcggtgccgggaacagagggagg--cgggggaatgtgaagggaggataggagaggaggctggagagagagctggaggccaaaagatgcagggtcttaga-gctacagtaaggatttgggcttgtact-----ctgagtgaggcagggacaca-tgggggatttcaggcagaggagttacctaa--tggcttagattttaggaggatcgctctggctgctgtgctgagaggagaccgca-gggcaaggcgatgccagggatatctgttagcaaatgttggaaacaaccctctctggagagaggatggtgacctgaaccagtgtggtggcaacagaggtggtgagaagtggtcagattttggatctgttctgaagggagagcccgcaggattcgttcatggactggacctgtggtgtgagggaaagaagagccaggataac-g-cggggttgtggcctgagcaactggcgggatggagctgttggcccctgaaat-ggacaggtgggagcgggg---gtggggtgagagcaaggtgctcagggtggacgtgtcttgtttgtgatgcccaaagacatatgcaaggggaggtgctgagtaggtgatgggatccatgcatct-gattcaagacgtggggtctccaacaacaaattagttggagatacaaatttgtaaatagatggtatctaaaaccgtaagagtgggtaagattatcaaaagagtgaacacaggtccgc--gaaatatgtcgaaggcca--gcccctgggcaccccagcttgaagagaatgtggagagagggggaaccctcaaaggagactgagaaggaagcagccattgagg--gaagaggggtaccaggagt-gggtgtccaggaaaccaagtgaggaaagcctcgaagtgcagaagtgatacaccggaccagtgctgccgacaggtcaaggacaggagaatcgatctgatttagcaacatgaagaccactggtggcctcgatgagagtggttatggtgaagtggctgaggacaaaaagcctgaatggagaagttttaaaagaaggcagaaaggggctgggcgcag i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100392913 1477 - 115148730 TCCAGCccatctgtccatccacccatccatccatccaAA----------------ACCA---AAAaggcattgttctaggcc-ctggggaaaagcagtaaacaaaacg-aatcctgccttcacgaagttttcattctcaaggcggaggtaggggaacacggaagagaaatacagtaaa-tcagtgttacagtgtattataaagtaatgagtgttggggagaaaaataagtttgggaaggagttatacagag-tgtaggatggggcgggagc----------------------------------acagtttcaaataggatcatcggggcacgcctctctgagaggctgatctctcagcaaagacatgaaggaggtgagggtgtctgggagaatacccatgaaggtatctgggagaagagcattccagacggagggagcagcaagggcaaacacctgcttgggacgttcaggggcccgcaggtgggg---------tgcagtgcggggagcagagggagg--cgggggaatgcgaagggagggtaggagaggaggctgcagagggagcttgaggccaaaaggtgcagggtcttaga-gctacagtaaggatttgggcttgtact-----ctgagtgaggcggggacaca-tgggtgatttcaggcagaggagttacctaa--tggcttaggttttaggaggatcgctctggctgttgtgttgagaggagaccgca-gggcaaggcgatgccagagatatctgttagcaaatgttggaaacaacc--ctcgggagacaggatggtggcctgaaccagtgtggtggcaacagaggtggtgagacgtggtcagattttggatgtgttctgaagggagaacccgcaggatttgttcatggactggacctgtggcgtgagggaaagaagagccaggataac-g-cggggttatggcctgagcaactggtgggatggagctgttggcacctgaaat-ggacaggtgggagcgggg---gtggggtgagagcaaggtgctcagggtggacgtgtcacgtctgtgaagcccaaagacacatggaaggggaggtgctgagtaggtgatgagatccatgcatcc-gattcaagatgtggggtctccaacaacaaattagttggagacacaaatttgtaaatagatggtatctaaaaccgtaagagtgggtaagattatcaaaagagtgaacacaggtctga--gatatatgtcgaaggcca--gcccctgggcaccccagcttgaagagaatgtggagagcgggggaaccctcaaaggagactgagacagaagcagccactgagg--gaggaggggcaccaggagt-gggtgtccaggagaccaagtgaggaaagactcaaagtgcagaagggatacaccggaccagtgctgctgacaggtcaaggacaggagaatcgatctgatttagcaacacgaagaccactggtggcctcgatgagagtggttatggtgaagtggctgaggacaaaaagcctgaatggagaagttttaaaagaaggcagaaagaggctgggcgcgg i nomLeu3.chr7b C 0 C 0 s chlSab2.chr19 18494195 1412 + 33263144 TCCAATCc--------------------------------------------------------taggcattgttctaggca-ctggggaaaagcagtaaacacaaca-aatcctgccttcacgaagttttcattctcaaggtggaggcaggggaacacggaaaagaaacacagtcaa-tcagtgttacagtgtattataaagtaatgagtgttggtgagaaaaatgggtttgggaaggagtcatacggag-tgcaggatggggcaggaac----------------------------------gcaatttcaaataggctcatcggtgcgcgcctctctgagaggctgatctttcagcaaagacatggaagtggggag------------------------ggtatctgggagaagagctttccagac----ggagcagcgagggcaaacacctgcttgggacgttcagggggctgcaggtgaggtgcgatgcctgcggtgccgggagcagagagagg--caggggaatgcgaagggagggta-gagaggaggctggagagggagctggaggccaaaaggtgcagggtcttaga-gctacagtaaggatttgggcttctact-----ttgagtgaggtgggggcaca-tgggggatttcaggcagaggagtgacctga--tggcttagattttaggaggatcactt--gctgttgtgttgagaggagaccaca-gggcaaggtgatgac----acttctgttagcaagtgtcagaaacaacc--ctcgggagaaaggatggtgacctgaaccagtgtggtggcaacagaggcagtgagaagtggtcagattttggatctattctgaagggagagcccgcaggatttgttcatggactgaacctgtggtgtgagggaaagaagagctgggataccgg-gggggttgtggcctgagcaactggcgggatggagctgtcggcacctgaagc-ggacaggtgggagcaggg---gtggggtgagagcaaggtgctgggggtggacgtgtcacgtttgtgatgcccaaagacacacgcaaggggaagtgccgagtaggtgatgagttccatgcatcc-ggttcaagatgtggggtctccagctccaaattagtcggagatacaaatctgtaaatagatgatatctgaaacc-tgagagagggtaagattatcagaagagtgaacacaggttcaa--gaaatatgtcaaaggcca--acccc-gggcaccccagcttgaagagaatgtagagagcagaggaaccctcaaaggagactgagatggaagcagccactgagg--gaagaggggcaccaggagc-gggtgtccaggacaccaagcgaggaaagcctcaaagcacagaagcgatgcactaggccagtgctgctgac-ggtcagggacaggagaatcgatctgatttagcaacatgaagaccactggtggccttgactagagtggttatggtgaaatggctgaggacaaaaagcctgaatggaggagttttaaaagaaggcagaaagaggctgggcgtgg i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40828274 1463 - 69331447 tccattcaatc-atccatctacccacccacccatccagatactcactgaatacctaccatgtgagaggcacttttctaagtagttggggtaaaacaatgaacaaaacacaaccctaccttcatggggtttatattctcatggt-------gggagaggcagataagaaacacaataaagtaaatcatacagtgtaatataaagtaatggatgttagggagaaaaataaatctgggaaggagg-atacagag-tgtagggtggggctagatcttccctgatctagagaagatctagaagatcttctgagatctctgagaagatctctgagggaag-atctctgagaagcttttatctaagcaaagatatgaggatgggaag---------gaagttagccaagaagatatctgggagaagaacattccagacagaggga-cagcaaaggtg---acataggtggcaggtttagggagctgcaaggaggc---------tgt-gtgccaggagcagagtaatggcttggggagcacgaagggatggtaggagatgaggtcagaaag-gcgatggaggccccaaggtacagtgtattataggatatggtaggg---taggattttgctgtttattgagtgagataggaaaacattgaaaggtttcaagcagaagggtgacatagtctatcttagattttaacaacatcaccctggctattgtgtgggaaagagatcataggggcaaggctctcacagggataccagttagcaagttactgaaacacac--cttgggagagaggatagtggcttgaagcagtatggtagctttagacgtggtgagaagt-gtcagatcctggacctattctgaaggtagagcccacaggatttgctcatggactggatgtgtggtctgagaggaa-aagagctaagatgat-gccaaggttttagcctgaacaactgac-------------cattacctgaaataggttttgtggggggtgggaatgtagggtaagatcaagtagctcagtttggacatggtaagtttgagacacccaac-agacaagcaagtggagatggtgagcagatggtgagacatgtaaatctagattcaggatgttggatttccaacaaaatattggtcaga-atacaaatttataaatagatgatacttaaaatcgtaagagtg----agattatcaaagacttgaatgtatgtaaaaagggtaaatgtacaaggtcagtgccctggggtcccctggcttgtggaggatgggggaaggggaggaaccatc-aaggagatagagaagg-agcagttgccaagattgaagaggga-accaggggtggggtgtccagggagccaagtgaagaaagcctcaagg-------acgatgagcccga-----------------------------------atctgatttagcaacatggatgccattggtgaccttgacaaaagcagtcatggtggaatgacagaagac-aaaagcttgactggagagggtttaagagaaggaggaaggaaactggagacaa i canFam3.chr10 I 1750 I 261 e calJac3.chr1 198203951 0 + 210400635 C e rheMac3.chr10 80544041 223 + 95678458 I e papAnu2.chr10 76225974 173 + 90941950 I e macFas5.chr10 80970944 173 - 96509753 I a score=214128.000000 s hg38.chr22_KI270876v1_alt 47331 261 + 263666 tggctcacgcctgtaatcccagcactttgggaggccgagctgggcggatcatttgaggtcaggagttcgagaccagcctggccaacatggtgaaacgctgtttctactaaaaatacaaaatttaaccaggtgtggtggcaggcgcctgt------aatcccagctacttgggaggctgaggtgggagaatcccttgaacccaagaggcggaggttgcagtgagccaagattgcgccactgcactccagcctgggccacagagcaaga s panTro4.chr22 34425700 261 + 49737984 tggctcacgcctgtaatcccagcactttgggaggccgagctgggcggatcatttgaggtcaggagttcaagaccagcctagccaacatggtgaaacgctgtttctactaaaaatacaaaatttaaccaggtgtggtggcaggtgcctgt------aatcccagctacttgggaggctgaggcaggagaatcccttgaacccaagaggcggaggttgcagtgagccaatattgcaccactgcactccagcctgggccacagagcgaga i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30839076 261 + 46535552 tggctcaggcctgtaatcccagcactttgggaggccaaggtgggcagatcacttgaggtcaggagtgagagaccagcctggccaacatggtgaaacgctgtttctactaaaaatacaaaaattaagcagacgtggtagcaggcgcctgt------aatcccagctacttgggaggctgaggcaggagaatcccttgaacccaagaggcggaggttgcagtgagccaagattgcgccagtgcactccagcctgtgccacagagtgaga i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100394390 261 - 115148730 tggctcacgcctgtaatcccagcactttgggaggccgaggtgggtggataatttgaggtcaggaattcgagaccagcctggccaatatggtgaaacgctgtttctactaaaaatacaaaaattaaccaagtgtggtggcaggcgcctgt------aatcccagctacttgggaggctgaggcaggagaatcccttgaacccaagaggtggaggttgcagtgagccaagattgtgccactgcactccagcctgggccacagagcgaga i nomLeu3.chr7b C 0 C 0 s chlSab2.chr19 18495607 266 + 33263144 tggctcacgcctgtaatcccagcacttt-ggaggccaaggtgggcggatcatttgaggtcaggagatcgagaccagcctggccaacatggtgaacccccgtttctactaaaaatacaaaaattaactgggcgtggtggtgcacgcctatagtcccagtcccagctactcgggaggctgaggcaggagaatcctttgaacctgggaggtggaggttgcagtgagccaagattacgccactgcactccagcctaggccacagagcaaga i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40829737 261 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C e rheMac3.chr10 80544041 223 + 95678458 I e papAnu2.chr10 76225974 173 + 90941950 I e macFas5.chr10 80970944 173 - 96509753 I a score=488136.000000 s hg38.chr22_KI270876v1_alt 47592 565 + 263666 ctctgtctcaaaaaaaaaaaa---------------agaaagaaagaaagaaaaaagaaaaaaaagcagaaagta----cagtgttttggaggggttttgctggaggaagaagtgaggtcagaaaagggaaa--a-aaattaaagatggaagaaatactagcatggttctgtgctgatggggatgatccaataaggaagagagggtggaggaAACTCCCGGGGAATGTCCCCCACCCTTTCAGCTCCCAGTGCCCGTGTTGGA-TGCAGCCTGCACTGGAACCCTGTCTCCAGACCTGACAT-CCTGGCGGTACCATC---CCAGCTCCATCCCACTTCCCAAGCAGCCTCTG--CAGCATGGTTTTTAGAGATACATGGCAACGTACCAATAAAATCTGATATATGACATTCTGTAGGTAAGTTCTCC-TTTTCACAC---CAGGAGCTCAGCGTGGATGTGTTAAGAATACCCTCCTAGGGAAACTCCTGCTGTATCCCCGACCAGCCACAAGATTCATTTCAggcagggcgcagtggctcatgcctataatcccaacactttgggagtccgaggcggaaggatcgcttgagctca s panTro4.chr22 34425961 582 + 49737984 ctctgcctcaaaaaaaaaaaaaaaaaaaaagaaaagaaaaagaaagaaagaaaaaagaaaaaaaagcagaaagta----caatgttttggaggggttttgctggaggaagaagtgaggtcagaaaaggggaaaca-aaattaaagatggaagaaatactagcatggttctgtgctgatggggatgatccaataaggaagagagggtggaggaAACTCCCGGGGAATGTCCCCCACCCTTTCAGCTCCCAGTGCCCGTGTTGGA-TGCAGCCTGCACTGGAACGTTGTCTCCAGACCTGACAT-CCTGGCGTTACCATC---CCAGCTCCATCCCACTTCCCAAGCAGCCTCTG--CAGCATGGTTTTTAGAGATACATGGCAACGTACCAATAAAATCTGATATATGACATTCTGTAGGTAAGTTCTCC-TTTTCACAC---CAGGAGCTCAGCGTGGATGTGTTAAGAACACCCTCCTAGGGAAACTCCTGCTGTATCCCCGACCAGCCACAAGATTCATTTCAggcagggcgcagtggctcatgcgtataatcccaacactttgggagtccgaggcggaaggatctcttgagttca i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30839337 557 + 46535552 ctctgtcccaaaaaaaaaaaa------------------------aaaaaagtaaagaaaaaaaagcagaaagta----caatgttttggagaggttttgctggaggaagaagtgaggtcagaaaaggaaaaaaacaaattaaagatggaagaaatactagcatggttctgtgctgatggggatgatccaacaaggaagagacggtggaggaaaCTCACGGGGAATGTCCCCCACCCTTTCAGCTTCCAGTGCCCGTGTTGGA-TGCAGCCTGCACTGGAACCCTGTCTCCAGACCTGACAT-CCTGGCGGTACCATC---CCAGCTCCATCCCACTTCCCAAGCAGCCTCTG--CAACATGGTTTTT--AGATACATGGCAACATACCAATAAAATCTGATATATGACATTCTGTAGGTAAGTTCTCC-TTTTCACAG---CAGGAGCTCAGTGTGGATGTGTTAAGAATACCCTCCTGGGGAACCTCCTGCTGTATCCCCTACCAGCCACAAGATTCATTTCAggcagggtgcagtggctcatgcctataatcccaacactttgggagtccgaggcggaaggatcacttgagctca i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100394651 546 - 115148730 --ctgtctcaaaaaaaaaaaa-----------------------------------------aaagcagaaagtacaagcaatgttttggaggggttttgctggaggaagaagtgaggtcagaaaaggaaaa--a-gaattgaagatggaagaaatgctagtacggttctgtgctgatggggatgatgcaataaggaagagatggtggaggaaaCTCCCAGGGAATGTCCCCCACCCTTTCAGCTCCCAGTGCCCGTGTTGGA-TGCAGCCTGCACTGGAACCCTGTCTCCAGACCTGACAT-CCTGACGGTACCATC---CCAGCTCCATCCCACTTCCCAAGCAGCCTCTGCACAACATGGTTTTTAGAGATACATGGCAACGTACCAATAAAATCTGATATATGACATTCTGTAGGTAAGTTCTCC-TTTTCACACACACAGGAGCTCAGTGTGGATGTGTTAAGAATACCCTCCTGGGGAAACTCCTGCAGTATCCCCTACCAGCCACAAGATTCATTTCAggcagggcgcagtggctcatgcctataatcccaacactttgggaggccgaggcggaaggatcgcttgagctca i nomLeu3.chr7b C 0 C 0 s chlSab2.chr19 18495873 549 + 33263144 ctctgtctcaaaaaaaaaaaa----------------------------------------aaaagcaggaagtacaagcaatgttttggaggggttttgctggaggaagaagtgaggtcagaaaaggaagaaaa-aaattaaagatggaagaaataccagcatggttctgtgctgatgaggatgatccaataaggaagagatggtggaggaaaTGCCCAGGGAGTGTCCCCCACCCTTTCAGCTCCTGGTGCCCGTGATGGA-TGCAGCCTGCACTGGAACCCTGTCTCCAGACCGTACAT-CCTGGCGGTACCTCTGGGCCAGCTCTGTCCCACCTACCTCACACCCTCTG--CAACATGGTTTTTAGAGATACATGGCAACGTGCCAGTAAAATCTGATCTATGACATTCTGTAGGTAAGTTCTCCTTTTTCACAC---CAGGAGCTCAGTGTGGATGTG-TAAGAATACCATCCTGGAGAATCTCCTGCTCTATCCCCTACCAGCCACAAGATTCATTTCAggcagggtgcggtggcttgtgcctataatcccaacactttgggaggccgaggcagaaggattaatggagctca i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40829998 412 - 69331447 ctccatctaaaaataaataaa--------------------------------------------------------------------------tctttataga-----------------------------a-aaa----------aagaaatcctaacatggttctgtgatggtggggatgccccaataatgaagagatggtgatgcCAATGTCCAGTGTGTGCCTCTTGCTCTTTGAGCTCCGGGTGCCCATGTTGGACTACAAGCTGGACTGGAACCCTGTTTCTAGACTTTGCATACCTGCCTAGACCTCTGGGTCAACTCCACCCTATTTCCCCCGCATGTCTTG--CAAAATGGTTGTTGGAAATACAGGGCAACTCAGCGATACGATCGGGTGTATGACACTCTATAGGTAAGTTCTCA-TATTT-------TAGG--------------------AGAGTACAGTCCTGGAGAATCTCTGATACTATTTCCTATCGGCAGTAAGGTTCATTCCA------------------------ATCTTTCCAAC-----------------CTGAGGAATC-CTTGTGCACA i canFam3.chr10 I 261 C 0 e calJac3.chr1 198203951 0 + 210400635 C e rheMac3.chr10 80544041 223 + 95678458 I e papAnu2.chr10 76225974 173 + 90941950 I e macFas5.chr10 80970944 173 - 96509753 I a score=148395.000000 s hg38.chr22_KI270876v1_alt 48157 184 + 263666 ggagttgcccagctggtctcagacacggtgaaagcccatctcttttaaaaatacaaaaattagccaggtgtg--------gtggtgcatgcctgtggtcccagctactcaggaggctgaggtaggaggatcgcttgagcctaggaggttcaggctgcagtgagctgagattgcaccactgcactccagcctg s panTro4.chr22 34426543 184 + 49737984 ggagttgcccagctggtctcaaacacggtgaaagcccatgtcttttaaaaatacaaaaattagccaggtgta--------gtggtgcatgcctgtggtcccagctactcaggaggctgaggtaggaggatcgcttgagcctaggaggttcaggctgcagtgagctgagattgcaccactgcactccagcctg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30839894 179 + 46535552 ggggttgcccagttggtctcaagcacggtgaaagcccatctctttaaaaaatacaaaaattagtcaggtgtggtggcgctgtggtgcatgcctgtggtcccagctactcaggaggctgaggtaggaggatcgcttgagcctaggaggttcaggctgcagtgagctgagattgcacAAAT------------- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100395197 183 - 115148730 ggagttgcccagctggtctcaaacaccgtgaaagcctatctcttttaaaaatacaaaaattagccaggtgtg--------gtggtgcatgcctgtggtcccagctactcaggaggctgaggta-gaggatcgcttgagcctaggaggttcaggctgcagtgagctgagattgcaccactgcactccagcctg i nomLeu3.chr7b C 0 C 0 s chlSab2.chr19 18496422 183 + 33263144 ggagttgcccagctggcctcaaacatggtgaaagcccatctctttaaaaagtacaaaaattagccaggtgtg--------gtggtgcatgcctgtggttccagcgactcagaaggctgaggca-gaggatcgcttgagcccaggaggttcaggctgcagtgagctgagattgcatcactgcactccaggctg i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40830410 0 - 69331447 C e calJac3.chr1 198203951 0 + 210400635 C e rheMac3.chr10 80544041 223 + 95678458 I e papAnu2.chr10 76225974 173 + 90941950 I e macFas5.chr10 80970944 173 - 96509753 I a score=993474.000000 s hg38.chr22_KI270876v1_alt 48341 1001 + 263666 CCCAGAAACTCCTTGATCCCTGTTCCCCTCCCCGACAAAAAGGGAAGAAGAaatattcactgaaagtttgctatgcattaggaactctgctaagtgttttCCCAACTTTACCAAATGACAGatggcaaatagttttggaaaacttagcactttctagacactgtgctgagtactttacacgtcctg-----tcttatccttgcaaaacactgctacagtaggaacatttattgtctgaagtttatagacaaggactctagggtgcagagctgttaagtattaataagttgctcaaggtcat-------------------------------ccacctagcagg-tggcaaatctgagttagaa--------cccttcaactcttggttccttgctcttaacaattagcctgcactgCCTTGGTTA----------------------------TCCTGAGGTCGCACCACTAAAGCACGGAAGGGCTGAAATTCACACATGCCTGTGCTTGTAGGCCTAAGGGAGAAATTTGAAGTTTGAGCCTGAGCAAGTGTTGCCAATGCTGGCAACACTTACTCTTAAA-ATGATTTGGAGA-TTAATATTTTC------------------------------CACACACACACATCAAAATTAATAGTTACATTCAGTCTGCACTTGGCAGG-GATTTTTCACAAGCATTGATCCAAATTCTCCCA-------------------GATTTGTGTAAGGcaagggtcagc-------agtgcgtgggccaaaccaggcctaccacctgtttct-----taaagttttattggaagattacca-ggtcctccactg----attgtctgcagctgcttttgtgctacagtggccaagttgagaagctgtgacagagaccgaaaggcctgtgcaacctaaaatatttaccatctggtgacattcagaaacagcgggttgacccc-tgGTCCAAAGCATTCAAGACAAGCAACTTTTGAGTATCTAGAATTCTGGCTTTCAAAATGAGAAATTGCCGTCTGTGAGCCGGGAAACCAATTTCCGAACCTAGAAGGAACCAGGGGGCAATGGTGTTT-CTG---------TGAGAGCACTTTGCACACTTGCCTCCTTTCTGTC s panTro4.chr22 34426727 1006 + 49737984 CCCAGAAACTCCTTGATCCCTGTTCCCCTCCCCCACAAAAAGGGAAGAAGAaatattcactgaaagtttgctatgcattaggaactctgctaagtgtttCCCCAACTTTACCAAATGACAGatggcaaatagttttggaaaacttagcactttctagacactgtgctgagtactttacacgtcctgtctcatctcatccttgcaaaacactgctacagtaggaacatttcttgtctgaagtttatagacaaggattctagggtgcagagctgttaagtattaataagttgctcaaggtcat-------------------------------ccacctagcagg-tggcaaatctgagttagaa--------cccttcaactcttggttccttgctcttaacaattaccttgcactgCCTTGGTTA----------------------------TCCTGAGGTCGCACCACTAAAGCATGGGAGGGCTGAAATTCACACATGCCTGTGCTTATAGGCCTAAGGGAGAAATTTTAAGTTTGAGCCTGAGCAAGTGTTGCCAATGCTGGCAACACTTACTCTTAAA-ATGATTTGGAGA-TTAATATTTTC------------------------------CACACACACACATCAAAATTAATAGTTACATTCAGTCTGCACTTGGCAGG-GACTTTTCACAAGCATTGATCCAAACTCTCCCA-------------------GATTTGTGTAAGGcaagggtcagc-------agtgcgtgggccaaaccaggcctaccacctgtttct-----taaagttttattggaagattacca-ggtcctccactg----attgtctgcagctgcttttgtgctacagtggccaagttgagaagctgtgacagagaccgaaaggcctgtgcaacctaaaatatttaccatctggtgacgttcagaaacagcgggttgacccc-tgGTCCAAAGCATTCAAGACAAGCAACTTTTGAGCATCTAGAATTCTGGCTTTCAAAATGAGAAATTGCCGTCTGTGAGCCGGGAAACCAATTTCCGAACCTAGAAGGAACCAGGGGGCGATGGTGTTT-CTG---------TGAGAGCACTTTGCACACTTGCCTCCTTTCTGTC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30840073 1018 + 46535552 -------------------CTGTTCCCCTCCCCCACAAAAAGGGAAGAAGAaatattcactgaaagtttgctatgtgctaggaactctgctaagtgctttCCCAACTTTACCAAATGACAaatggcaaatagttatggaaaacttagcactttctagacactgtactgagtactctacacgtcctgtcttatctcatcctcgcaaaacactgctacagtaggaacatttattgtctgaagtttatagacaaggactccagggtgcagcgctgttaagtattaataagttgctcaaggtcatccacctagcaggtggcagatctgagcacctgccacctagcagg-tggcagatctgagtcagaa--------ccctccaactcttggttccttgctcttaaccattaccctgcactgCCTTGGTTA----------------------------TCCTGAGGTCGCACCACTAAAGCATGGGAGGCCTGAAATTCATACATGCCTGTGCTTATAGGCCTAAGGGAGAAATTTTAAGTTTGAGCCTGAGCAAGTGTTGCCAATGCTGGCAACACTTACTCTTAAA-ATGATTTGGAGA-TTAATATTTTC------------------------------CACACATGCACATCAAAATTAATAGTTACATTCAGTCTGCACTTGGCAAG-GATTTTTCACAAGCATTGATCCAAACTCTCCCA-------------------GATTTGTGTAAGGcaagggtcggc-------agtgcgtgggccaaaccaggcctaccacctgtttct-----taaagttttattggaagattacca-ggtccttcactg----attgtctgcagctgctcttgtgctacagtggccaagttgagaagctgtgacagagaccgaaaggcctgtgcaacctaaaatatttacaatctggtgacgttcagaaacagcgagttgacccc-tgGTCCAAAGGATTCAAGACAAGCAACTTTTGAGTATCTAGAATTCTGGCTTTCAAAATGAGAAATTGCCGTCCGTGAGCTGGGAAACCAATTTCCGAACCTAGAAGGAACCAGGGGGCGATGGTGTTT-CTG---------TGAGAGCACTTTGCACACTTGCCTCCTTTCCGTC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100395380 1003 - 115148730 CCCAGAAATTCCTTGATCCCTGTTCCCCTCCCCCGCAAAAAGGGAAGAAGAaatattcactgaaagtttgctatgcactaggaact---ctaagtgctttCCCAACTTTACCAAATGACAAATGGCAAATCGttatggaaaacttagcactttctagacactgtgctgagtactctacacgtcctgtcttatctcatccttgcaaaaccctgcttcagcaggaacatttattgtctgaagtttatagacaaggactctagggtgcagagctgttaagtattagtaagttgctcaaggtcat-------------------------------ccacccagcagg-tggcagatctgagtcagaa--------ccctccaactcttggttctttgcttttaaccattaccctgcactgCCTTGGTTA----------------------------TCCTGAGGTCACACCACTAAAGCATGGGAGGGCTGAAATTCACACCTGCCTGTGCTTATAGGCCTAAGGCAGAAATTTTAAGTTTGAGCCTGAGCAAGTGTCGCCAATGCTGGCAACACTTACTCTTAAA-ATGATTTGGAGA-TTAATATTTTC------------------------------CACACACGCACATCAAAATTAATAGTTACATTCAGTCTGCACTTGGCAGG-GATTTTTCACAAGCATTGATCCAAACTCTCCCA-------------------GATTTGTGTAAGGcaagggtcggc-------agtgcgtgggccaaaccaggcctaccacctgtttct-----taaaatttcattggaagattacca-ggtccttcactg----attgtctgcagctgctcttgtgctacagtggccaaattgagaagctgtgacagagaccgaaaggcctgtgcaacctaaaatatttacgatctggtgacactcagaaacagcgggttgactcc-tgGTCCAGAGGATTCAAGACAAGCAACTTTTGAGTATCTAGAATTCTGGCTTTCAAAGTGAGAAATTGCCATCTGTGAGCCGGGAAACCAATTTCCGAACCTATAAGGAACCAGGGGGCGATGGTGTTT-CTG---------TGAGAGCACTTTGCACACTTGCCTCCTTTCCATC i nomLeu3.chr7b C 0 C 0 s chlSab2.chr19 18496605 986 + 33263144 CCCAGAAACTCCTTGATCCCTGTTCCCCTCCCCCACAAAAAGGGAAGACAAAATattcactgaaagtttactgtgcactaggaactctgctaagtgctttcccagcttcatcGAATGACAaatggcaaatagttacggaaaacttaacagttggcagacacggtgctgagtactctacacgtcctg-----tcttatccttgcaaaacactgctaaagtaggaacatttgttgtctaaagtttataaacgaggactctacggtgcagagctgttaagtattaataagttgctcaaggtaat-------------------------------ccacctagtagg-tggcagatctgacttagaa--------ccctccaactcttggttccttgcacttaaccactaccttgcactgCCTTGGTTA----------------------------TCCTGAGGTCACACCACTAAAGCATGGGAGGGCTGAAATTCATACATGCCTGTGCTTATAGGCCTAAGGCAGAAATTTGAAGTTTGAGCCTGAGCAAGTGTTGCCAATTCTGGCAACACTTACTCTTAAA-ATGATTTGGAGA-TTAATATTTTC------------------------------CACACATGCACATCAAAATTAATAGTTACATTCAGTCTGCACTTGGCAGG-GATTTTTCACAAGCACTGATCCAAACTC----------------------------------AGGcaagggtcggc-------agtgcgtgggccaagtcagacctaccgcctgtttct-----taaagttttattggaagattacca-ggtccttcactg----actgtctgcagttgctcttgtgctacagtggccaagttgagaagctgtgacagagaccgaaaggcctgtgcaaccgaaaatattttctatctgctgctattcagaaacagcgggttgacccc-tgGTCCAAAGGATTCAAGACAAGCAACTTTTGAGGATCTAGAATTCTGGCTTTCAAAATGAGAAATTGCCATCTGTGGGGCAGGAAGCCGATTTCTGAACCTAGAAGGAACCAGGGGGCGATGGTGTTTCCTG---------TGAGAACACTTTGCACGCTTGCCTCTTTTCTGT- i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40830410 1069 - 69331447 TCCAGAAATTCCTCGATT-CTGTTCTTTCTCCTTTCAAAACAGAAAAGAGGAAAGAATACTCATGGTTTACTCTGAACTAGGAATTCTGCTAAATGCTTTACCAAATTTACTGaat----catagcccatagttattgaatacttggcaccctttagacactgtgctaagtactctgtaaataaggtcctatttcatccttgtgatcgactactaccgt-ggtgcatctatcatc------ttccaatctagagtt--agtgcacagaggcattga--------------------attgt-------------------------------cca--gagtaggttggcagctcagggctggaatgcagagtccttttgactcttgtctccttgcccataatcactaccctacactgCCCTGGTTAGGTGTCCCAGTTAGGAAATGGgtgacttcctcaaggtcaccccattaaggagcagtagggctggaatttgtacatgtctgTGTTTGTAGGCCCGAGGCAGACATTTTAAATTTGTTGATGTGA-------GCCAATTCTGACATCACCCACTTATAAACATTATGGGGAGATTTAGTATTTTTTACCCTTGCATGCATGCCTGAGGGCACACACACACGCACACCCCAAAATTAACATTTACATTCAGTCTGTACTTGGTGGGAGATTTTTCACAAGCACTGATCTAAACTCTTCCAGAGATTTCTGGAGTCTTGTGATCTGTCAAAGGcaagagtcagccagttatagcccacgggccaaattgggcccaccgcctgtttttgtgaataaagttttcttggagcagagccatggccctttgtttgtgcacagcctctggctgccttcctgctgtaatggcagacttgagaagttgtgac--agaccaggtggtctgccaaacgtaaaatactgattatctggcac--tttacaaaaagcttgctgacgccAGGGTCTAAATGTTTCAAGAGAAGCAGCTTTTGAGCATCTGGAATTCTGGCTTTTGAAATGAGAAACTGCCACCCATGAACTGGGAAGTCAGTTCCAAAACCCAGAAGAAACCAAGCAGTGATGGTGTAG-CCGCAGTGGTCCTGAGAGCGCTCTTCACTACTGTCCCCTT------ i canFam3.chr10 C 0 C 0 e calJac3.chr1 198203951 0 + 210400635 C e rheMac3.chr10 80544041 223 + 95678458 I e papAnu2.chr10 76225974 173 + 90941950 I e macFas5.chr10 80970944 173 - 96509753 I a score=15249.000000 s hg38.chr22_KI270876v1_alt 49342 12 + 263666 ACAGGGC--CAGGC s panTro4.chr22 34427733 12 + 49737984 ACAGGGC--CAGGC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841091 12 + 46535552 ACAGGGT--CAGGC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100396383 12 - 115148730 ACAGGGC--CAGGC i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 80971117 12 - 96509753 ATAAGAC--AAGGG i macFas5.chr10 I 173 C 0 s papAnu2.chr10 76226147 12 + 90941950 ATAAGAC--AAGGG i papAnu2.chr10 I 173 C 0 s chlSab2.chr19 18497591 11 + 33263144 -CAGGGC--CAGGC i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40831479 11 - 69331447 ---GGGCTGCAGGC i canFam3.chr10 C 0 C 0 e calJac3.chr1 198203951 0 + 210400635 C e rheMac3.chr10 80544041 223 + 95678458 I a score=337822.000000 s hg38.chr22_KI270876v1_alt 49354 149 + 263666 AGCCCTCAAGCGAGTAAGGTGA---AAGGTTGGAGGTAGG-TTCAGTGCTGACCTCAAGAGAGGCCTGGCGCTGGGCAGTCTACCCTGTCCCT-----------CCCCACAGAGCTCACTGCCTCACTTTCCACCTGGCCTCTTTCTCCTCCCGCAGACCAGTT s panTro4.chr22 34427745 149 + 49737984 AGCCCTCAAGCGAGTAAGGTGA---AAGGTTGGAGGTAGG-TTCAGTGCTGACCTCAAGAGAGGCCTGGCGCTGGGCAGTCTACCCTGTCCCT-----------CCCCACAGAGCTCGCTGCCTCACTTTCCACCTGGCCTCTTTCTCCACCCGCAGACCAGTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841103 149 + 46535552 AGCCCTCAAGCGAGTAAGGTGA---AAGGTTGGAGGTAGG-TTCAGTGCTGACCTCAAGAGAGGCCTGGCGCTGGGCAGTCTACCCTGTCCCT-----------CCCCACAGAGCTCACTGCCTCACTTTCCACCTGGCCTCTTTCTCTGCCCGCAGATCAGTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100396395 148 - 115148730 AGCCCTCAAGCAAGTAAGGTGA---AAGGTTGGAGGTAGG-TTCAGTGCTGACCTC--GAGAGGCCTGGCACTGGGCAGTCTACCCTGTCCCT----------CCCCCACAGAGCTCACTGCCTCACTTTCCACCTGGCCTCTTTCTCCGCCCGCAGACCAGTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80544264 160 + 95678458 AGCCCTCAAGTGTGAAAGGTGA---AAGGTTGGGGGTAGG-ATCAGTGCCGCCCTCAGGAGAGGCCTGGCGCTGGGCAGTCTTCCCTGTCCTTGCCCCTCCCGCCCCCAAGGAGCTCACTGCCCCACTTTCCACCTGGCCTGTTTCTCCGCCGGCAGACCAGTT i rheMac3.chr10 I 223 C 0 s macFas5.chr10 80971129 160 - 96509753 AGCCCTCAAGTGTGAAAGGTGA---AAGGTTGGGGGTAGG-ATCAGTGCCGCCCTCAGGAGAGGCCTGGCGCTGGGCAGTCTTCCCTGTCCCTGCCCCTCCCGCCCCCAAGGAGCTCACTGCCCCACTTTCCACCTGGCCTGTTTCTCCGCCGGCAGACCAGTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76226159 163 + 90941950 AGCCCTCAAGTGTGaaaggtggctcacacttgggGGTAGG-ATCAGTGCCGCCCTCAGGAGAGGCCTGGCACTGGGCAGTCTTCCCTGTCCCCGCCCCTCCCGCCCCCAAGGAGCTCACTGCCCCACTTTCCACCTGGCCTGTTTCTCCGCCGGCAGACCAGTT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18497602 160 + 33263144 AGCCCTCAAGCGTGAAAGGTGA---AAGGTTGGAGGTAGG-ATCAGTGCCGCCCTCAGGAGAGGCCTGGCGCTGGGCAGTCTTCCCTGTCCCCGCCCCTCCCGCCCCCAAGGAACTCACTGCCCCACTTTCCACGCGGCCTATTTCTCCGCCGGCAGACCAGTT i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40831490 133 - 69331447 --------------TCGGGGGA---CAGCCTGGAGGGCGGCTTTCCCGTTAGCCTGCAGGGAGGCCTG----CAGACAGCTGGGCCTGGAGCTGGGCCACGTCCCCTC------CTGCCTGCCCCAGATCTC-CCCGGCCTCCTTCT---CCCGTAGACCAGTT i canFam3.chr10 C 0 I 142 e calJac3.chr1 198203951 0 + 210400635 C a score=163607.000000 s hg38.chr22_KI270876v1_alt 49503 68 + 263666 CTCTCTGCACTACTCATCGGCTTACCCGTGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTG s panTro4.chr22 34427894 68 + 49737984 CTCTCTGCACTACTCATCGGCTTACCCATGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841252 68 + 46535552 CTCTCCGCACTATTCATCAGCTTACCCGTGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100396543 68 - 115148730 CTCTCTGCACTACTCATCGGCTTACCCGTGGATCCAGGCTCAGAAAACACTCCGCCTGTGTGAAACTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80544424 68 + 95678458 CTCTCTGCACTACTCCTCAGCTTACCTGTGGATCCAGGCACAGAAACCATTCCACCTGTGTGAAACTG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80971289 68 - 96509753 CTCTCTGCACTACTCCTCAGCTTACCTGTGGATCCAGGCACAGAAACCATTCCACCTGTGTGAAACTG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76226322 68 + 90941950 CTCTCTGCACTACTCCTCAGCTTACCTGTGGATCCAGGCACAGAAACCATTCCACCTGTGTGAAACTG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18497762 68 + 33263144 CTCTCTGCACTACTCCTCAGCTTACCTGTGGATCCAGGCACAGAAACCATTCCACCTGTGTGAAACTG i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C a score=2865.000000 s hg38.chr22_KI270876v1_alt 49571 2 + 263666 TG s panTro4.chr22 34427962 2 + 49737984 TG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841320 2 + 46535552 TG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100396611 2 - 115148730 TG i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 80971357 2 - 96509753 TG i macFas5.chr10 C 0 C 0 s chlSab2.chr19 18497830 2 + 33263144 TG i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C e rheMac3.chr10 80544492 0 + 95678458 C e papAnu2.chr10 76226390 0 + 90941950 C a score=70823.000000 s hg38.chr22_KI270876v1_alt 49573 28 + 263666 CAAGACCCACGGATCCAGGCTCAGAAAA s panTro4.chr22 34427964 28 + 49737984 CAAAACCCGCGGATCCAGGCTCAGAAAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841322 28 + 46535552 CAAGACCCACGGATCCAGGCTCAGAAAA i ponAbe2.chr22 C 0 T 51 s nomLeu3.chr7b 100396613 28 - 115148730 CAAGACCCACGGATCCAGGCTCAGAAAA i nomLeu3.chr7b C 0 T 51 s rheMac3.chr10 80544492 28 + 95678458 CAAGACCCACGGATCCAGGCTCAGAAAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80971359 28 - 96509753 CAAGACCCGTGGATCCAGGCTCAGAAAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76226390 28 + 90941950 CAAGACCCGTGGATCCAGGCTCAGAAAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18497832 28 + 33263144 CAAGACCCACGGATCCAGGCTCAGAAAA i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C a score=49301.000000 s hg38.chr22_KI270876v1_alt 49601 21 + 263666 CTTGCCACCTGTGTGAAACTG s panTro4.chr22 34427992 21 + 49737984 CTTGCCACCTGTGTGAAACTG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841299 21 + 46535552 CATTCCACCTGTGTGAAACTG i ponAbe2.chr22 T 51 C 0 s nomLeu3.chr7b 100396590 21 - 115148730 CACTCCGCCTGTGTGAAACTG i nomLeu3.chr7b T 51 C 0 s rheMac3.chr10 80544520 21 + 95678458 CATTCCACCTGTGTGAAACTG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80971387 21 - 96509753 CATTCCACCTGTGTGAAACTG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76226418 21 + 90941950 CATTCCACCTGTGTGAAACTG i papAnu2.chr10 C 0 T 49 s chlSab2.chr19 18497860 21 + 33263144 CATTCCACCTGTGTGAAACTG i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C a score=4011.000000 s hg38.chr22_KI270876v1_alt 49622 2 + 263666 TG s panTro4.chr22 34428013 2 + 49737984 TG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841320 2 + 46535552 TG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100396611 2 - 115148730 TG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80544541 2 + 95678458 TG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80971408 2 - 96509753 TG i macFas5.chr10 C 0 C 0 s chlSab2.chr19 18497881 2 + 33263144 TG i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C e papAnu2.chr10 76226439 49 + 90941950 T a score=9842.000000 s hg38.chr22_KI270876v1_alt 49624 4 + 263666 CAAG s panTro4.chr22 34428015 4 + 49737984 CGAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841322 4 + 46535552 CAAG i ponAbe2.chr22 C 0 T 51 s nomLeu3.chr7b 100396613 4 - 115148730 CAAG i nomLeu3.chr7b C 0 T 51 s rheMac3.chr10 80544543 4 + 95678458 CAAG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80971410 4 - 96509753 CAAG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76226390 4 + 90941950 CAAG i papAnu2.chr10 T 49 C 0 s chlSab2.chr19 18497883 4 + 33263144 CAAG i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C a score=115948.000000 s hg38.chr22_KI270876v1_alt 49628 44 + 263666 ACCCGTGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACT s panTro4.chr22 34428019 44 + 49737984 ACCCGTGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841275 44 + 46535552 ACCCGTGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACT i ponAbe2.chr22 T 51 C 0 s nomLeu3.chr7b 100396566 44 - 115148730 ACCCGTGGATCCAGGCTCAGAAAACACTCCGCCTGTGTGAAACT i nomLeu3.chr7b T 51 C 0 s rheMac3.chr10 80544547 44 + 95678458 ACCCGTGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACT i rheMac3.chr10 C 0 T 99 s macFas5.chr10 80971414 44 - 96509753 ACCCGTGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76226394 44 + 90941950 ACCCGTGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18497887 44 + 33263144 ACCCGTGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACT i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C a score=2100.000000 s hg38.chr22_KI270876v1_alt 49672 1 + 263666 G s panTro4.chr22 34428063 1 + 49737984 G i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841319 1 + 46535552 G i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100396610 1 - 115148730 G i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 80971458 1 - 96509753 G i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76226438 1 + 90941950 G i papAnu2.chr10 C 0 I 49 s chlSab2.chr19 18497931 1 + 33263144 G i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C e rheMac3.chr10 80544591 99 + 95678458 T a score=4011.000000 s hg38.chr22_KI270876v1_alt 49673 2 + 263666 TG s panTro4.chr22 34428064 2 + 49737984 TG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841320 2 + 46535552 TG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100396611 2 - 115148730 TG i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 80971459 2 - 96509753 TG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76226488 2 + 90941950 TG i papAnu2.chr10 I 49 C 0 s chlSab2.chr19 18497932 2 + 33263144 TG i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C e rheMac3.chr10 80544591 99 + 95678458 T a score=22014.000000 s hg38.chr22_KI270876v1_alt 49675 9 + 263666 CAAGACCCA s panTro4.chr22 34428066 9 + 49737984 CAAGACCCA i panTro4.chr22 C 0 T 102 s ponAbe2.chr22 30841322 9 + 46535552 CAAGACCCA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100396613 9 - 115148730 CAAGACCCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80544492 9 + 95678458 CAAGACCCA i rheMac3.chr10 T 99 C 0 s macFas5.chr10 80971461 9 - 96509753 CAAGACCCG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76226490 9 + 90941950 CAAGACCCA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18497934 9 + 33263144 CAAGACCCC i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C a score=48434.000000 s hg38.chr22_KI270876v1_alt 49684 19 + 263666 CGGATCCAGGCTCAGAAAA s panTro4.chr22 34427973 19 + 49737984 CGGATCCAGGCTCAGAAAA i panTro4.chr22 T 102 C 0 s ponAbe2.chr22 30841331 19 + 46535552 CGGATCCAGGCTCAGAAAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100396622 19 - 115148730 CGGATCCAGGCTCAGAAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80544501 19 + 95678458 CGGATCCAGGCTCAGAAAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80971470 19 - 96509753 TGGATCCAGGCTCAGAAAA i macFas5.chr10 C 0 T 102 s papAnu2.chr10 76226499 19 + 90941950 CAGATCCAGGCTCAGAAAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18497943 19 + 33263144 TGGATCCAGGCTCAGAAAA i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C a score=46501.000000 s hg38.chr22_KI270876v1_alt 49703 20 + 263666 CTTGCCACCTGTGTGAAACT s panTro4.chr22 34427992 20 + 49737984 CTTGCCACCTGTGTGAAACT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841350 20 + 46535552 CATTCCACCTGTGTGAAACT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100396641 20 - 115148730 CACTCCGCCTGTGTGAAACT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80544520 20 + 95678458 CATTCCACCTGTGTGAAACT i rheMac3.chr10 C 0 I 51 s macFas5.chr10 80971387 20 - 96509753 CATTCCACCTGTGTGAAACT i macFas5.chr10 T 102 C 0 s papAnu2.chr10 76226518 20 + 90941950 CATTCCACCTGTGTGAAACT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18497962 20 + 33263144 CATTCCACCTGTGTGAAACT i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C a score=8148.000000 s hg38.chr22_KI270876v1_alt 49723 3 + 263666 GTG s panTro4.chr22 34428012 3 + 49737984 GTG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841370 3 + 46535552 GTG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100396661 3 - 115148730 GTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80544591 3 + 95678458 GTG i rheMac3.chr10 I 51 C 0 s macFas5.chr10 80971407 3 - 96509753 GTG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76226538 3 + 90941950 GTG i papAnu2.chr10 C 0 T 151 s chlSab2.chr19 18497982 3 + 33263144 GTG i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C a score=147121.000000 s hg38.chr22_KI270876v1_alt 49726 60 + 263666 CAAGACCCGTGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTGCAAGACCCA s panTro4.chr22 34428015 60 + 49737984 CGAGACCCGTGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTGCAAGACCCA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841373 60 + 46535552 CAAGACCCGCGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTGCAAGACCCG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100396664 60 - 115148730 CAAGACCCGCGGATCCAGGCTCAGAAAACACTCCGCCTGTGTGAAACTGTGCAAGACCCG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80544594 60 + 95678458 CAAGACCCGTGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTGCAAGACCCG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80971410 60 - 96509753 CAAGACCCGTGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTGCAAGACCCG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76226390 58 + 90941950 CAAGACCCGTGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAAC--TGCAAGACCCA i papAnu2.chr10 T 151 C 0 s chlSab2.chr19 18497985 60 + 33263144 TAAGACCCACAGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTGCAAGACCCA i chlSab2.chr19 C 0 T 102 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C a score=106544.000000 s hg38.chr22_KI270876v1_alt 49786 43 + 263666 CGGATCCAGGCTCAGAAAGCATTCCACCTGTGTGAAACTGTGC s panTro4.chr22 34428075 43 + 49737984 CGGATCCAGGCTCAGAAAGCATTCCACCTGTGTGAAACTGTGC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841433 43 + 46535552 CGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTGC i ponAbe2.chr22 C 0 T 102 s nomLeu3.chr7b 100396724 43 - 115148730 CGGATCCAGGCTCAGAAAACACTCCGCCTGTGTGAAACTGTGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80544654 43 + 95678458 Tggatccaggctcagaaaacattccacctgtgtgaaactgtgc i rheMac3.chr10 C 0 T 51 s macFas5.chr10 80971470 43 - 96509753 TGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTGC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76226448 43 + 90941950 CAGATCCAGGCTCAGAAAACATTCCACGTGTGTGAAACTGTGC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18497943 43 + 33263144 TGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTGT i chlSab2.chr19 T 102 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C a score=6441.000000 s hg38.chr22_KI270876v1_alt 49829 3 + 263666 GAG s panTro4.chr22 34428118 3 + 49737984 GAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841374 3 + 46535552 AAG i ponAbe2.chr22 T 102 C 0 s nomLeu3.chr7b 100396767 3 - 115148730 AAG i nomLeu3.chr7b C 0 T 102 s rheMac3.chr10 80544646 3 + 95678458 AAG i rheMac3.chr10 T 51 C 0 s macFas5.chr10 80971513 3 - 96509753 AAG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76226491 3 + 90941950 AAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18497986 3 + 33263144 AAG i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C a score=9177.000000 s hg38.chr22_KI270876v1_alt 49832 4 + 263666 ACCC s panTro4.chr22 34428121 4 + 49737984 ACCC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841377 4 + 46535552 ACCC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100396668 4 - 115148730 ACCC i nomLeu3.chr7b T 102 C 0 s rheMac3.chr10 80544649 4 + 95678458 ACCC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80971516 4 - 96509753 GCTC i macFas5.chr10 C 0 T 102 s papAnu2.chr10 76226494 4 + 90941950 ACCC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18497989 4 + 33263144 ACCC i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C a score=104692.000000 s hg38.chr22_KI270876v1_alt 49836 43 + 263666 ACGGATCCAGGCTCAGAAAGCATTCCACCTGTCTGAAACTGTG s panTro4.chr22 34428125 43 + 49737984 GCGGATCCAGGCTCAGAAAACATTCCACCTGTCTGAAACTGTG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841381 43 + 46535552 GCGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100396672 43 - 115148730 GCGGATCCAGGCTCAGAAAACACTCCGCCTGTGTGAAACTGTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80544653 43 + 95678458 GTggatccaggctcagaaaacattccacctgtgtgaaactgtg i rheMac3.chr10 C 0 T 204 s macFas5.chr10 80971418 43 - 96509753 GTGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTG i macFas5.chr10 T 102 C 0 s papAnu2.chr10 76226498 43 + 90941950 ACAGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18497993 43 + 33263144 ACAGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTG i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C a score=9241.000000 s hg38.chr22_KI270876v1_alt 49879 4 + 263666 CGAG s panTro4.chr22 34428168 4 + 49737984 CGAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841424 4 + 46535552 CAAG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100396715 4 - 115148730 CAAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80544492 4 + 95678458 CAAG i rheMac3.chr10 T 204 C 0 s macFas5.chr10 80971461 4 - 96509753 CAAG i macFas5.chr10 C 0 T 153 s papAnu2.chr10 76226541 4 + 90941950 CAAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18498036 4 + 33263144 CAAG i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C a score=114266.000000 s hg38.chr22_KI270876v1_alt 49883 48 + 263666 ACCCACGGATCCAGGCTCAGAAAGCATTCCACCTGTGTGAAACTGTGC s panTro4.chr22 34428172 48 + 49737984 ACCCATGGATCCAGGCTCAGAAAGCATTCCACCTGTCTGAAACTGTGC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841428 48 + 46535552 ACCCGCGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTGC i ponAbe2.chr22 C 0 T 201 s nomLeu3.chr7b 100396719 48 - 115148730 ACCCGCGGATCCAGGCTCAGAAAACACTCCGCCTGTGTGAAACTGTGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80544496 48 + 95678458 ACCCACGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTGC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80971312 48 - 96509753 ACCTGTGGATCCAGGCACAGAAACCATTCCACCTGTGTGAAACTGTGC i macFas5.chr10 T 153 C 0 s papAnu2.chr10 76226545 48 + 90941950 ACCCCTGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTGC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18498040 48 + 33263144 ACCCATgaatccaggctcagaaaacattccacctgtgtgaaactgtgc i chlSab2.chr19 C 0 T 102 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C a score=4711.000000 s hg38.chr22_KI270876v1_alt 49931 3 + 263666 GAG s panTro4.chr22 34428220 3 + 49737984 GAG i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100396767 3 - 115148730 AAG i nomLeu3.chr7b C 0 T 204 s rheMac3.chr10 80544544 3 + 95678458 AAG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80971360 3 - 96509753 AAG i macFas5.chr10 C 0 T 51 s papAnu2.chr10 76226593 3 + 90941950 AAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18497986 3 + 33263144 AAG i chlSab2.chr19 T 102 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C e ponAbe2.chr22 30841476 201 + 46535552 T a score=124301.000000 s hg38.chr22_KI270876v1_alt 49934 51 + 263666 ACCCGCGGATCCAGGCTCAGAAAGCATTCCACCTGTGTGAAACTGTGCGAG s panTro4.chr22 34428223 51 + 49737984 ACCCGCGGATCCAGGCTCAGAAAGCATTCCACCTGTGTGAAACTGTGCAAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841275 51 + 46535552 ACCCGTGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTGCAAG i ponAbe2.chr22 T 201 T 51 s nomLeu3.chr7b 100396566 51 - 115148730 ACCCGTGGATCCAGGCTCAGAAAACACTCCGCCTGTGTGAAACTGTGCAAG i nomLeu3.chr7b T 204 T 51 s rheMac3.chr10 80544547 51 + 95678458 ACCCGTGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTGCAAG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80971312 51 - 96509753 ACCTGTGGATCCAGGCACAGAAACCATTCCACCTGTGTGAAACTGTGCAAG i macFas5.chr10 T 51 T 51 s papAnu2.chr10 76226596 51 + 90941950 ACCCGTGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTGCAAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18497989 51 + 33263144 ACCCACAGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTGCAAG i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C a score=116151.000000 s hg38.chr22_KI270876v1_alt 49985 47 + 263666 ACCCGCGGATCCAGGCTCAGAAAGCATTCCACCTGTGTGAAACTGTG s panTro4.chr22 34428274 47 + 49737984 ACCCATggatccaggctcagaaaacattccacctgtgtgaaactgtg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841275 47 + 46535552 ACCCGTGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTG i ponAbe2.chr22 T 51 C 0 s nomLeu3.chr7b 100396566 47 - 115148730 ACCCGTGGATCCAGGCTCAGAAAACACTCCGCCTGTGTGAAACTGTG i nomLeu3.chr7b T 51 C 0 s rheMac3.chr10 80544598 47 + 95678458 ACCCGTGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80971312 47 - 96509753 ACCTGTGGATCCAGGCACAGAAACCATTCCACCTGTGTGAAACTGTG i macFas5.chr10 T 51 C 0 s papAnu2.chr10 76226647 47 + 90941950 ACCCGTGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTG i papAnu2.chr10 C 0 T 255 s chlSab2.chr19 18498040 47 + 33263144 ACCCATgaatccaggctcagaaaacattccacctgtgtgaaactgtg i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C a score=2800.000000 s hg38.chr22_KI270876v1_alt 50032 1 + 263666 C s panTro4.chr22 34428321 1 + 49737984 c i panTro4.chr22 C 0 T 255 s ponAbe2.chr22 30841322 1 + 46535552 C i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100396613 1 - 115148730 C i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80544645 1 + 95678458 C i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80971359 1 - 96509753 C i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76226439 1 + 90941950 C i papAnu2.chr10 T 255 C 0 s chlSab2.chr19 18498087 1 + 33263144 c i chlSab2.chr19 C 0 T 297 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C a score=5190.000000 s hg38.chr22_KI270876v1_alt 50033 3 + 263666 GAG s panTro4.chr22 34428067 3 + 49737984 AAG i panTro4.chr22 T 255 C 0 s ponAbe2.chr22 30841323 3 + 46535552 AAG i ponAbe2.chr22 C 0 T 51 s nomLeu3.chr7b 100396614 3 - 115148730 AAG i nomLeu3.chr7b C 0 T 51 s rheMac3.chr10 80544646 3 + 95678458 AAG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80971360 3 - 96509753 AAG i macFas5.chr10 C 0 T 51 s papAnu2.chr10 76226440 3 + 90941950 AAG i papAnu2.chr10 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C e chlSab2.chr19 18498088 297 + 33263144 T a score=8680.000000 s hg38.chr22_KI270876v1_alt 50036 6 + 263666 ACCCGC s panTro4.chr22 34428070 6 + 49737984 ACCCAC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841275 6 + 46535552 ACCCGT i ponAbe2.chr22 T 51 C 0 s nomLeu3.chr7b 100396566 6 - 115148730 ACCCGT i nomLeu3.chr7b T 51 C 0 s rheMac3.chr10 80544649 6 + 95678458 ACCCGT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80971312 6 - 96509753 ACCTGT i macFas5.chr10 T 51 C 0 s papAnu2.chr10 76226443 6 + 90941950 ACCCAC i papAnu2.chr10 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C e chlSab2.chr19 18498088 297 + 33263144 T a score=102078.000000 s hg38.chr22_KI270876v1_alt 50042 42 + 263666 GGATCCAGGCTCAGAAAGCATTCCACCTGTGTGAAACTGTGC s panTro4.chr22 34428076 42 + 49737984 GGATCCAGGCTCAGAAAGCATTCCACCTGTGTGAAACTGTGC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841281 42 + 46535552 GGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTGC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100396572 42 - 115148730 GGATCCAGGCTCAGAAAACACTCCGCCTGTGTGAAACTGTGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80544655 42 + 95678458 ggatccaggctcagaaaacattccacctgtgtgaaactgtgc i rheMac3.chr10 C 0 T 204 s macFas5.chr10 80971318 42 - 96509753 GGATCCAGGCACAGAAACCATTCCACCTGTGTGAAACTGTGC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76226449 42 + 90941950 AGATCCAGGCTCAGAAAACATTCCACGTGTGTGAAACTGTGC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18497791 42 + 33263144 GGATCCAGGCACAGAAACCATTCCACCTGTGTGAAACTGTGC i chlSab2.chr19 T 297 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C a score=6441.000000 s hg38.chr22_KI270876v1_alt 50084 3 + 263666 GAG s panTro4.chr22 34428118 3 + 49737984 GAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841323 3 + 46535552 AAG i ponAbe2.chr22 C 0 T 51 s nomLeu3.chr7b 100396614 3 - 115148730 AAG i nomLeu3.chr7b C 0 T 51 s rheMac3.chr10 80544493 3 + 95678458 AAG i rheMac3.chr10 T 204 C 0 s macFas5.chr10 80971360 3 - 96509753 AAG i macFas5.chr10 C 0 T 51 s papAnu2.chr10 76226491 3 + 90941950 AAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18497833 3 + 33263144 AAG i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C a score=113279.000000 s hg38.chr22_KI270876v1_alt 50087 47 + 263666 ACCCGCGGATCCAGGCTCAGAAAGCATTCCACCTGTGTGAAACTGTG s panTro4.chr22 34428121 47 + 49737984 ACCCGCGGATCCAGGCTCAGAAAACATTCCACCTGTCTGAAACTGTG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841275 47 + 46535552 ACCCGTGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTG i ponAbe2.chr22 T 51 C 0 s nomLeu3.chr7b 100396566 47 - 115148730 ACCCGTGGATCCAGGCTCAGAAAACACTCCGCCTGTGTGAAACTGTG i nomLeu3.chr7b T 51 C 0 s rheMac3.chr10 80544496 47 + 95678458 ACCCACGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTG i rheMac3.chr10 C 0 T 51 s macFas5.chr10 80971312 47 - 96509753 ACCTGTGGATCCAGGCACAGAAACCATTCCACCTGTGTGAAACTGTG i macFas5.chr10 T 51 C 0 s papAnu2.chr10 76226494 47 + 90941950 ACCCACAGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18497836 47 + 33263144 ACCCACGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTG i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C a score=9241.000000 s hg38.chr22_KI270876v1_alt 50134 4 + 263666 CGAG s panTro4.chr22 34428168 4 + 49737984 CGAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841322 4 + 46535552 CAAG i ponAbe2.chr22 C 0 T 51 s nomLeu3.chr7b 100396613 4 - 115148730 CAAG i nomLeu3.chr7b C 0 T 51 s rheMac3.chr10 80544492 4 + 95678458 CAAG i rheMac3.chr10 T 51 C 0 s macFas5.chr10 80971359 4 - 96509753 CAAG i macFas5.chr10 C 0 T 51 s papAnu2.chr10 76226541 4 + 90941950 CAAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18497883 4 + 33263144 CAAG i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C a score=9959.000000 s hg38.chr22_KI270876v1_alt 50138 5 + 263666 ACCCG s panTro4.chr22 34428172 5 + 49737984 ACCCA i panTro4.chr22 C 0 T 102 s ponAbe2.chr22 30841275 5 + 46535552 ACCCG i ponAbe2.chr22 T 51 C 0 s nomLeu3.chr7b 100396566 5 - 115148730 ACCCG i nomLeu3.chr7b T 51 C 0 s rheMac3.chr10 80544496 5 + 95678458 ACCCA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80971312 5 - 96509753 ACCTG i macFas5.chr10 T 51 C 0 s papAnu2.chr10 76226545 5 + 90941950 ACCCC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18497887 5 + 33263144 ACCCG i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C a score=104379.000000 s hg38.chr22_KI270876v1_alt 50143 42 + 263666 CGGATCCAGGCTCAGAAAGCATTCCACCTGTGTGAAACTGTG s panTro4.chr22 34428075 42 + 49737984 CGGATCCAGGCTCAGAAAGCATTCCACCTGTGTGAAACTGTG i panTro4.chr22 T 102 C 0 s ponAbe2.chr22 30841280 42 + 46535552 TGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100396571 42 - 115148730 TGGATCCAGGCTCAGAAAACACTCCGCCTGTGTGAAACTGTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80544501 42 + 95678458 CGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTG i rheMac3.chr10 C 0 T 51 s macFas5.chr10 80971317 42 - 96509753 TGGATCCAGGCACAGAAACCATTCCACCTGTGTGAAACTGTG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76226550 42 + 90941950 TGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18497892 42 + 33263144 TGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTG i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C a score=192928.000000 s hg38.chr22_KI270876v1_alt 50185 79 + 263666 CGAGACCCGCGGATCCAGGCTCAGAAAGCATTCCACCTGTGTGAAACTGTGCGAGACCCGCGGATCCAGGCTCAGAAAG s panTro4.chr22 34428117 79 + 49737984 CGAGACCCGCGGATCCAGGCTCAGAAAACATTCCACCTGTCTGAAACTGTGCGAGACCCATGGATCCAGGCTCAGAAAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841322 79 + 46535552 CAAGACCCACGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTGCAAGACCCGCGGATCCAGGCTCAGAAAA i ponAbe2.chr22 C 0 T 51 s nomLeu3.chr7b 100396613 79 - 115148730 CAAGACCCACGGATCCAGGCTCAGAAAACACTCCGCCTGTGTGAAACTGTGCAAGACCCGCGGATCCAGGCTCAGAAAA i nomLeu3.chr7b C 0 T 51 s rheMac3.chr10 80544492 79 + 95678458 CAAGACCCACGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTGCAAGACCCGTGGATCCAGGCTCAGAAAA i rheMac3.chr10 T 51 C 0 s macFas5.chr10 80971359 79 - 96509753 CAAGACCCGTGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTGCAAGACCCGTGGATCCAGGCTCAGAAAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76226592 79 + 90941950 CAAGACCCGTGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTGCAAGACCCGTGGATCCAGGCTCAGAAAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18497934 79 + 33263144 CAAGACCCCTGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTGTAAGACCCACAGATCCAGGCTCAGAAAA i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C a score=189043.000000 s hg38.chr22_KI270876v1_alt 50264 75 + 263666 CATTCCACCTGTGTGAAACTGTGCGAGACCCGCGGATCCAGGCTCAGAAAGCATTCCACCTGTGTGAAACTGTGC s panTro4.chr22 34428196 75 + 49737984 CATTCCACCTGTCTGAAACTGTGCGAGACCCGCGGATCCAGGCTCAGAAAGCATTCCACCTGTGTGAAACTGTGC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841350 75 + 46535552 CATTCCACCTGTGTGAAACTGTGCAAGACCCGCGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTGC i ponAbe2.chr22 T 51 C 0 s nomLeu3.chr7b 100396641 75 - 115148730 CACTCCGCCTGTGTGAAACTGTGCAAGACCCGCGGATCCAGGCTCAGAAAACACTCCGCCTGTGTGAAACTGTGC i nomLeu3.chr7b T 51 C 0 s rheMac3.chr10 80544571 75 + 95678458 CATTCCACCTGTGTGAAACTGTGCAAGACCCGTGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTGC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80971438 75 - 96509753 CATTCCACCTGTGTGAAACTGTGCAAGACCCGTGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTGC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76226671 75 + 90941950 CATTCCACCTGTGTGAAACTGTGCAAGACCCGTGGATCCAGGCTCAGAAAACATTCCACCTGTGTGAAACTGTGC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18498013 75 + 33263144 CATTCCACCTGTGTGAAACTGTGCAAGACCCATgaatccaggctcagaaaacattccacctgtgtgaaactgtgc i chlSab2.chr19 C 0 T 43 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C a score=11097.000000 s hg38.chr22_KI270876v1_alt 50339 7 + 263666 GAGACCC s panTro4.chr22 34428271 7 + 49737984 AAAACCC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841425 7 + 46535552 AAGACCC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100396716 7 - 115148730 AAGACCC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80544646 7 + 95678458 AAGACCC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80971513 7 - 96509753 AAGGCTC i macFas5.chr10 C 0 T 31 s papAnu2.chr10 76226746 7 + 90941950 AAGACCC i papAnu2.chr10 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C e chlSab2.chr19 18498088 43 + 33263144 T a score=845.000000 s hg38.chr22_KI270876v1_alt 50346 1 + 263666 G s panTro4.chr22 34428278 1 + 49737984 A i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841432 1 + 46535552 G i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100396723 1 - 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80544653 1 + 95678458 G i rheMac3.chr10 C 0 C 0 s papAnu2.chr10 76226753 1 + 90941950 G i papAnu2.chr10 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C e macFas5.chr10 80971520 31 - 96509753 T e chlSab2.chr19 18498088 43 + 33263144 T a score=35055.000000 s hg38.chr22_KI270876v1_alt 50347 19 + 263666 CGGATCCAGGCTCAGAAAG s panTro4.chr22 34428279 19 + 49737984 Tggatccaggctcagaaaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841433 19 + 46535552 CGGATCCAGGCTCAGAAAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100396724 19 - 115148730 CGGATCCAGGCTCAGAAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80544654 19 + 95678458 Tggatccaggctcagaaaa i rheMac3.chr10 C 0 C 0 s papAnu2.chr10 76226754 19 + 90941950 TGGATCCAGGCTCAGAAAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18498045 19 + 33263144 Tgaatccaggctcagaaaa i chlSab2.chr19 T 43 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C e macFas5.chr10 80971520 31 - 96509753 T a score=1747292.000000 s hg38.chr22_KI270876v1_alt 50366 714 + 263666 CATTCCACCTGTGTGAAACTGTGCAAGGCTCCTCCTGCCACTGTTGTGACTTTCTCACAAAACGGGGACGAGAATGAGGAGTTCTTATGAAGAACTCAGTTTCATTTTTAAGTGAAAATTAAATGAGATCTCATATGCGAAGGCACCTACGGTCACCCCCGGTAGCTGACAGACGTTCAGCCAATGCTGTGCTTCCAGAAAGCACAACAGGACACTCGGGAAGCATTTACTGACTGCTCTGGATGAAGAGAACCCTGGAGCAGGAACCCTGAGCTAGCACAGAAGACCCCAACTTTGGAGAACTTACCATTCCGCTGGAAAAACCATTTTATGCTCCTGTTTATTCTATCAGGCAAACACTTTCAAACACCA-----GCAAGGCAACATTTGGAAAAGGGGAGGCTCCTtagcccccactcctgccaataactggcgatatgctcttgcgtttagcctctctgggccctttgctcctgtattggtcaaatagaggcttgaactaTTTGAATGTCAA-------------------------------------------------------------------------------GGGAAGGAGTGGAAGGGCCTCCACTCAGTGAAGAAAGACTCACGGAGCCCCCATGACCACTGGGTGCCAGGATCCACGCAGGGCCTAGGGGCACAGCCCCAGCAAAGCTGCCCGGGTTCTTGCTGGGGTTTGAGGCCTCGCTCTATGACCTCTCTGTGCCTCAGTTTCCTGAGGACACAAGAAGCAAACAATTCAGCAGGGAA s panTro4.chr22 34428298 714 + 49737984 cattccacctgtgtgaaactgtgcaaggctcctcctgccactgttttgactttctcacaaaacggggacgagaatgaggagttcttatgaagaactcagtttcatttttaagtgaaaattaaatgagatctcatatgcgaaggcacctatggtcacccccggtacctgacagacgttcagccaatgctgTGCTTCCAGAAAGCACAACAGGACACTCGGGAAGCATTTACTGACTGCTCTAGATGAAGAGAACCCTGAAGCAGGAACCTTGAGCTAACACAGAAGACCCCAACTTTGGAGAACTTACCATTCCGCTGGAAAAACCATTTTATGCTCCTGTTTATTCTATCAGGCAAACACTTTCAAACACCA-----GCAAGGCAACATTTGGAAAAGGGGAGGCTCCTtagcccccactcctgccaataactggcgatatgctcttgcgtttagcctctctgggccctttgctcctgtattggtcaaatagaggcttgaactaTTTGAATGTCAA-------------------------------------------------------------------------------GGGAAGGAGTGGAAGGGCCtccactcagtgaagaaagactcacggagcccccatgaccactgggtgccaggatccatgcagggcctaggggcacagccccagcaaagctgcccgggttcttgcTGGGGTTTGAGGCCTCGCTCTATGACCTCTCTGTGCCTCAGTTTCCTGAGGACACAAGAAGCAAACAATTCAGCAGGGAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30841452 780 + 46535552 CATTCCACCTGTGTGAAACTGTGCAAGGCTCCTCCTGCCACTGTTTTGACTTTCTCACAAAATGGGGATGAGAATGAGGAGTTCTTATGAAGAACTCAGTTTCATTTTTAAGTGAAAATTAAATGAGATCCCATATGCGAAGGCACCTACGGTCACCCCCGGTAACTGACAGACTTTCAGCCAATGCACAGCTTCCAGAAAGCACGACAGGAGACTCAGGAAGCATTTACTGACTGCTCTGGATGAAGAGAACCCTGGAGCAGGAACCCCGAGCTAGCACAGAAGACCCCAACTTCGGAGAACTTACCATTCCGCTGAAAAAACCATTTTATGCTCCTGTTTATTCTATCAGGCAAACACTTTCAAACACCA-----GCAAGGCAACATTTGGAAAAGGGGAGGCTCCTtagcccccactcctgccaataactggccgtatcctcttgtgtttagcctttctgggccctttgctcctgtactggtcaaatagaggattgaactacctgaatgtcaaggcttgtgcccaactctacaattccaCAAC--------CTTGACTGT-----ATGAACAGATGAAGAGAATAAGACTGGGGGAAGGAGTGGAAGGGCCTCCACTCAGTGAAGAAAGACTCACGGAGCCCCCATGACCACTGGGTGCCAGGATCCATGCAGGGCCTAGGGGCACGGCCCCAGCAAAGCTGCCCGGGTTCTTGCTGGGGTTTGAGGCCTCGCTCTATGACCTCTCTGTGCCTCAGTTTCCCGAGGACACAAGAAGCAAACAATTCAGCAGGGAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100396743 773 - 115148730 CACTCCGCCTGTGTGAAACTGTGCAAGTCTCCTCTTGCCACTGTTTTGACTTTCTCACAAAATGGAGACGAGAATGAGGAGTTCTTATGAAGAACTCAGTTTCATTTTTAAGTGAAAATTAAATGAGATCTCATATGCGAAGGCACCTACGGTCACCCCCGGTACCTGACAGACGTTCAGCCAATGCTGTGCTTCCAGAAG------------ACTCGGGAAGCATTTACTGACTGCTCTGGATGAAGAGAACCCTGGAGCAGGAACCCCGAGCTAGCACAGAAGACCCCAACCTCAGAGCACTTACCATTCCGCTGGAAAAACCATTTTATGCTCCTGTTTATTCTATCAGGCAAACACTGTCAAACACCAGCAAGGCAAGGCAACATTTGGAAAAGGGGAGGCTCCTtagcccccactcctgccaataactggccgtatgctcttgtgtttagcctctctgggccctttgctcctgtattggtcaaatagaggcttgaactatttgaacgtcaaggcttatgcccaactctacaattccaCAAC--------CTTGAGTGC-----ATGAACAGATGAAGAGAATAAGACTGGGGGAAGGAGTGGAAGGGCCTCCACTCAGTGAAGAAAGACTCACAGAGCCCGCATGACCACTGGGTGCCAGGATCCATGCAGGGCCTACAGACACGACCCCAGCAAAGCTGCCCGGGTTCTTACTGGGGTTTGAGGCCTCGCTCTATGACCATTCTGTGCCTCAGTTTCCTGAGGACACAAGAAGCAAACAATTCAGCAGGGAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80544673 776 + 95678458 cattccacctgtgtgaaactgtgcaaggctcctcctgccactgttttgactttctcacaaaatggggatgagaatgaggagttcttatgaagaactcagtttcattttgaagtgaaaattcaatgagatctcatatgcgaaggcacctaaggccacccccggtacctgacagacgttcagccaatgctgTGCTTCCAGAAAGCACGACAGGAGACTGGGGAAGCATTTACTGACTGCTCTGGATGAAGAGAACCCTG--GCAGGGACCCCGAGCTAGCACAGAAGACCCCAACTTTGGAGAACTTAGCATTCTGCTGGAAAAACCATTTTATGCTCCTGTTTATTCTATCAGGCAAACACTTTCAAACACCA-----GCAAGGCAACATTTGGAAAaggggaggctcctcagccccgactcctgccaataactggctgtatgctcttgtgtttagcctctctggaccttttgctcc--tattgatcaaatagaggcttgaactatttgaacgtcaaggcttgtgcccgactctacaattccacaaC--------CTTGACTGT-----ACGAACAGATGAAGAGAATAAGACGGGGGGAAGGAGTGGAAGGGCCTCCACTCAGTGAAGAAAGGCTCATGGAGCCCCCATGACCACTGGGTGCCAGGGTCTATAGGGGGCCTAGGGACACGGCCCCAGGAGAGCTGCCTGGGTTCTTGCTGGGGTTTGAGGCCTTGCTCTATGACCTCTCTGTGCCTCAGTTTCCTGAGGACACAAGAAGCAAATAATTCAGCAGGGAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80971489 776 - 96509753 CATTCCACCTGTGTGAAACTGTGCAAGGCTCCTCCTGCCACTGTTTTGACTTTCTCACAAAATGGGGATGAGAATGAGGAGTTCTTATGAAGAACTCAGTTTGATTTTGAAGTGAAAATTCAATGAGATCTCATATGCGAAGGCACCTAAGGCCACCCCCGGTACCTGACAGACGTTCAGCCAATGCTGTGCTTCCAGAAAGCACGACAGGAGACTGGGGAAGCATTTACTGACTGCTCTGGATGAAGAGAACCCTG--GCAGGGACCCCGAGCTAGCACAGAAGACCCCAACTTTGGAGAACTTAGCATTCTGCTGGAAAAACCATTTTATGTTCCTGTTTATTCTATCAGGCAAACACTTTCAAACACCA-----GCAAGGCAACATTTGGAAAAGGGGAGGCTCCTCagccccgactcctgccaataactggctgtatgctcttgtgtttagcctctctggaccttttgctcc--tattgatcaaatagaggcttgaactatttgaacgtcaaggcttgtgcccgactctacaattccaCAACCTTGACTG--------T-----ACGAACAGATGAAGAGAATAAGACGGGGGGAAGGAGTGGAAGGGCCTCCACTCAGTGAAGAAAGGCTCATGGAGCCCCCATGACCACTGGGTGCCAGGGTCTATAGGGGGCCTAGGGACACGGCCCCAGGAGAGCTGCCTGGGTTCTTGCTGGGGTTTGAGGCCTTGCTCTATGACCTCTCTGTGCCTCAGTTTCCTGAGGACACAAGAAGCAAATAATTCAGCAGGGAA i macFas5.chr10 T 31 C 0 s papAnu2.chr10 76226773 772 + 90941950 CATTCCACCTGTGTGAAACTGTGCAAGGCTCCTCCTGCCACTGTTTTGACTTTCTCACAAAATGGGGATGAGAATGAGGAGTTCTTATGAAAAACTCAGTTTCATTTTGAAGTGAAAATTCAATGAGATCTCATATGCGAAGGCACCTAAGGCCAACCCCGGTACCTGACAGACGTTCAGCCAATGCTGTGCTTCCAGAAAGCACGACAGGAGACTGGGGAAGCATTTACTGACTGCTCTGGATGAAGAGAACCCTG--GCAGGGACCCCGAGCTAGCACAGAAGACCCCAACTTTGGAGAACTTAGCATTCTGCTGGAAAAACCATTTTATGCTCCTGTTTATTCTATCAGGCAAACACTTTCAAACACCA-----GCAAGGCAACATTTGGAAAACGGGAGGCTCCTCAGCCCCGACTCCTGCCAATAACTGGCCGTATGCTCTTGTGtttagcctctctgggcctttTGCTCC--TATTGGTCAAATAGAGGCTTGAACTATTTGAACGTCAAGGCTTGTGCCCGACTCTACAATTCCACAAC--------CTTGACTGT-----ACGAACCGATGAAGAGAATAAGACGGGGGGAAGGAGTGGAAGGGCCTCCACTCAGTGAAGAAAGGCTCATGGAGCCCCCATGACCACTGGGTGCCAGGATCTGTGGGGGGCCTAGGGACACGGCCCCAGGAGAGCTGCCTGGGTTCTTGCTGGGGTTTGAGGCCTTGCTCtatgacctctctgtgcctcagtttcctgaggaCACAAGAAGC----AATTCAGCAGGGAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18498064 774 + 33263144 cattccacctgtgtgaaactgtgcaaggctactcctgccactgttttgactttctcacaaaatggggatgagaatgaggagttcttatgaagaactcagtttcatatttaagtgaaaattcaatgagatctcatatgcgaaggcacctaaggccacccctgctacctgacagacgttcagccaatgctgTGCTTCCAGAAAGCACGACAGGAGACTGGGGAAGCATTTACTGACTGCTCTGGATGAAGAGAACCCTG--GCAGGAACCCCGAGCTAGCACAGAAGACCCCAACTTTGGAGAACTTAGCATTCTGCTGGAAAAACCATTTTATGCTCCTGTTTATTCTATCAGGCAAACACTTTCAAACGCca-----gcaaggcaccatttggaaaaggggaggctcctcagccccgactcctgccaataactggccgtatgctcttgtgtttagcttctctgggccttttgctct--tattggtcaaatagaggcttgaactatttgaacatcaaggcttgtgcccgactctacaattccacaac--------c-------ttgactatgaACAGATGAAGAGAATAAGACAGGGGGAAGGAGTGGAAAGGCCTCCACTCAGCGAAGAAAGGCTCATGGAGCCCCCATGACCACTGGGTGCCAGGATCTGTGGGGGGCCTAGGGACACGGCCCCAGGAGAGCTGCCTGGGTTCTTGCTGGGGTTTGAGGCCTTGCTTTATGACCTCTCTGTGCCTCAGTTTCCTGAGGACACAAGAAGCAAACAATTCAGCAGGGAA i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198203951 0 + 210400635 C a score=456334.000000 s hg38.chr22_KI270876v1_alt 51080 166 + 263666 GATATGACCTGACCAATTAGAACTGAGAGGTCAA-GGGGATGTTGGGACTTAAGTCTCAGAACCCATGACATTGTCCTGTCTTTGGAACCTGGGGCGGTTGTCCAGAGCGCTTGGCTCATCCCT---GTGGATCACACGAT------TACTAATAACagtaatgaaacatttattg s panTro4.chr22 34429012 166 + 49737984 GATATGACCTGACCAATTAGAACTGAGAGGTCAA-GGGGATGTTGGGACTTAAGTCTCAGAACCCATGTCATTGTCCTGTCTTTGGAACCTGGGGCGGTTGTCCAGAGCGCTTGGCTCATCCCT---GTGGATCACACGAT------TACTAATAACagtaatgaaatatttattg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30842232 172 + 46535552 GATACCACCTGACCAATTAGAACTGAGAGGTCAA-GGGGATGTTGGGACTTAAGTCTCAGAAGCCATGTCATTGTCCTGTCTTTGGAACCTTGGATGGTTGTCCAGAGCACTTGGCTCATCACT---GTGGATCACACAATtaataataataataataataatGAaacatgtactg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100397516 169 - 115148730 GATACGACCTGACCAATTAGAACTAAGAGGTCAA-GGGGATGTTGGGACTTAAGTCTCAGAACCCATGTCATTATCCTGTCTTTGGAACCTAGGACGGTTGTCCAGAGCGCTTGGCTCATCCCTGCAGCAGATCACACGAT------TAATAATaacaataatgagacatttattg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80545449 163 + 95678458 GATAGGACCTGACCAGTTAGAACTGGGAGGTCAA-GGGGATGTTGGAACTTAAGGCTCAGAACCCATGTCATTGTCCTATCTTTGGAGCCTGGGATGGTTGTCCAGAGTGCTTGGCTCATCCCT---GTGGATCACACGAT------TAATAAT---aataataaaacatgtattg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80972265 163 - 96509753 GATAGGACCTGACCAATTAGAACTGGGAGGTCAA-GGGGATGTTGGAACTTAAGGCTCAGAACCCATGTCATTGTCCTATCTTTGGAGCCTGGGATGGTTGTCCAGAGTGCTTGGCTCATCCCT---GTGGATCACACGAT------TAATAAT---aataataaaacatgtattg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76227545 166 + 90941950 GATAGGACCTGACCAATTAGAACTGGGAGGTCAA-GGGGATGTTGGAACTTAAGGCTCAGAACCCATGTCATTGTCCTGTCTTTGGAGCCTGGGATGGTTGTCCAGAGTGCTTGGCTCATCCCT---GTGGATCACacaat------taataataacaataataaaacatgtaTTG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18498838 166 + 33263144 GATAGGACCTGACCAATTAGAACTGGGAGGTCAA-GGGGATGTTGGAACTTAAGGCTCAGAACCCATGTCATTGTCCTGTCTTTGGAGCCTGGGATGGTTGTCCAGAGTGCTTGGCTCATCCCT---GTGGATCACACGAT------TAATAATAACaataataaaacatgtattg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198203951 152 + 210400635 GATAAGACCTGACCAATTAGAACTGGGAGGTCAAGGGGGATGTTGGGACATAAGGCTCAGAACCCATGTCATTGCCCTGTCTTTGGAGCCTTGGACAGTTGTCCAGAGCACTT--------------GTGGATCACACaat------taataataataa----aaaaaatttaCTg i calJac3.chr1 C 0 I 1048 e canFam3.chr10 40831623 142 - 69331447 I a score=1258875.000000 s hg38.chr22_KI270876v1_alt 51246 547 + 263666 agtgaatactatgtgccatgtatttctaagcattttacatatatgaacattt-ttttttt---------ggtctgagacagagtttcactcttgtcgcccaggctggagtgcagtggcgtgttcctggctcactgcaacctttgcctctcaggttcgagcgattctcctgactcagcctcccaagtagctgggattacaggcatttgccaccatgcctggctaa---------ttttttttgtatttttagtagagacagggtttcaccacgttggccaggctggtcttgaactcctgacctcaggtgatccacccgcctcagcctcccagagtgctgggattacaggcgtaagccaccgcgcccagcccatatatgaacttttaaaatccttacatcaaccctctcaagtagagactaataccatctccatttgacagatggaaacactgaggcaggctaagcaactcctgcaaaggcacatgtccaggaagtggcagcgccacatttcaagtttagacagctgggatccggagcccatgctttACATCCTGAAAGAATAAGGCT s panTro4.chr22 34429178 548 + 49737984 agtgaatactatgtgccatgtatttctaagcattttacatatatgaacattt-ttttttt--------tggtctgagacagagtttcactcttgtcgcccaggctggagtgcaatggcgtgttcctggctcactgcaacctttgcctctcaggttcgagcgattctcctgactcagcctcccgagtagctgggattacaggcatttgccaccatgcccggctaa---------ttttttttgtatttttagtagagacagggtttcaccacgttggccaggctggtcttgaactcctgacctcaggtgatccacccacctcagcctcccagagtgctgggattacaggcgtgagccaccgcgcccagcccatatatgaacttttaaaatccttacatcaaccctctcaagtagagactaataccatctccatttgacagatggaaacactgaggcaggctaagcaactcctgcaaaggcacatgtccaggaagtggcagagccacatttcaagtttagacagctgggatccggagcccatgctttACATCCTGAAAGAATAAGGCT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30842404 552 + 46535552 agtgactactatgtgccatgtatttctaagcatcttacatatatgaactttt-ttttttt----ttttttttctgagacagagtttcactcttgtcgctcaggctggagtgcagtggcatgttcctggctcactgcaacctttgcctctcgggttcgagcgattctcctgactcagcctcccgagtagctgggattacaggcatttgccaccacacccggctaa---------ttttttttgtatttttagtagagacagggttttaccacgttggccaggctagtcttgaactcctgacctcaggtgatccacccacgtcagcctcccagagtcctgggattataggcgtgagccaccgtgcccagcccatatatgaacttttaaaatccttacatcaaccctctcaagtagagactaataccatctccatttgacagatggaaacactgaggcacgctaagcaactcctgcaaagacacacgtccaggaagtggcagagccagatttcaagtttagacagctgggatctggagcccatgctttACATCCTGAAAGAATAAGGCT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100397685 556 - 115148730 agtgaatactatgtgccatgtatttctgagcattttacatatatgaactttg-tttttttttttttttttgtctgagacaaagtttcactattgtcgcccaggctggggtgcagtggcgtgttcctggctcattgcaacctctgcctctcgggttggagtgcttctcctgactcagcctcccgagtagctggttttacaggcatttgccaccacacctggctaa---------ttttttttatatttttagtagagacagggtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatccacctgcctcagcctcccagagtgctgggattataggcgggagccaccgcacccagcccatatatgaacttttaaaatccttacatcaaccctctcaagtagagactaataccatctctatttgacagatggaaacgctgaggcgcgctaagctactcctgtaaaggcacacatccaggaagtggcagagccagatttcaagtttagacagctgggatccggagcccacgctttACATCCTGAAAGAATAAGGCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80545612 552 + 95678458 aatgaatactatgtgccatgtatttctaagcattttacgtatatgaattttc-ttttctt---tttttttttttgagacagagtttcattcttgttgcccaggctggagtgcagtggcatgttcctggctccctgtaacctttgcctctcgggttcaagtgattctcctgactcagcttcctgagtagctgggattacaggtgcccgccaccacgcccggctag--tttttttttttttttgtatttttagtagagacaggatttcaccatgttggccaggctggtcttgaactcctgacgtcaggtgatccacccgccttggcctcccaaagtgctgggattacaggcatgagccaccgcacccagcccctatatgaacttttaaaatcctta--------ctctcaagtacagactaatactatctccatttgacagatggaaacgctgaggcacactaagcaactcctgcaagggcacacgttcaggaagtggcagagccggatttcaagtttagacggctgggatccggagcccatgctttACATCCTAAAAGAATAAGGCT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80972428 552 - 96509753 aatgaatactatgtgccatgtatttctaagcattttacgtatatgaattttc-tttcttt---tttttttttttgagacagagtttcattcttgttgcccaggctggagtgcagtggcatgttcctggctcactgtaacctttgcctctcgggttcaagtgattctcctgactcagcttcctgagtagctgggattacaggtgcccgccaccacgcccggctag--tttttttttttatttgtatttttagtagagacaggatttcaccatgttggccaggctggtcttgaactcctgacgtcaggtgatccacccgccttggcctcccaaagtgctgggattacaggcatgagccaccgcacccagcccctatatgaacttttaaaatcctta--------ctctcaagtacagactaatactatctccatttgacagatggaaacgctgaggcacactaagcaactcctgcaagggcacacgttcaggaagtggcagagccggatttcaagtttagacggctgggatccggagcccatgctttACATCCTAAAAGAATAAGGCT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76227711 554 + 90941950 AGTGAATACTATGTGCCAtgtatttctaagcattttacatatatgaattttcttttcttt---tttttttttttgagacagagtttcattcttgttgcccaggctggagtgaagtggcatgttcctggctcactgtaacctttgcctctcgggttcaagtgattctcctgactcagcttcctgagtagctgggattacaggtgcccgccaccacgcccggctagtttttttttttttttttgcatttttagtagagacagggtttcaccatgttggccaggctggtcttgaactcctgacgtcaggtgatccacccgccttggcctcccaaagtgctgggattataggcatgagccactgcacccagcccctatatgaacttttaaaatccttA--------CTCTCAAGTACAGACTAATACtatctccatttgacagatggaAACGCTGAGGCACACTAAGCAACT-CTGCAAGGGCACACGttcaggaagtggcagagccggATTTCAAGTTTAGACGGCTGGGATCCGGAGCCCATGCTTTACATCCTAAAAGAATAAGGCT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18499004 550 + 33263144 agtgaatactatgtgccatgtatttctaagcattttacatatatgaat-----ttttttt---tttttttttttgagacagagtttcattcttgttgcccaggctggagtgcagtggcgtgttcctggctcactgtaacctttgcctctcgggttcaagtgattctcctgactcagcttcctgagtagctgggattacaggtgcccgccaccacgcccggctagtttttttttttttttttgtatttttagtagagacagggtttcaccatattggccaggctggtcttgaactcctgacctcaggtgatccacccgccttggcctcccaaagtgctgggattacaggcatgagccaccgcacccagcccctatatgaacttttaaaatcctta--------ttctcaagtacagactaatactatctccatttgacagatggaaacgctgagggacactaagcaactcctgcaagggcacacgttcaggaagtggcagagccggatttcaagtttagacagctgggatccggagcccatgctttACATCCTAAAAGAATAAGGCT i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198204103 1048 + 210400635 I a score=58322.000000 s hg38.chr22_KI270876v1_alt 51793 19 + 263666 TTCTCAGAGCAGAGGAGCA s panTro4.chr22 34429726 19 + 49737984 TTCTCAGAGCAGAGGAGCA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30842956 19 + 46535552 TTCTCAGAGCAGAGGAGCA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100398241 19 - 115148730 TTCTCAGCACAGAGGAGCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80546164 19 + 95678458 TTCTTAGAGCAGAGGAGCA i rheMac3.chr10 C 0 I 1 s macFas5.chr10 80972980 19 - 96509753 TTCTTAGAGCAGAGGAGCA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76228265 19 + 90941950 TTCTTAGAGCAGAGGAGca i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18499554 19 + 33263144 TTCTTAGAGCAGAGGAGCA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198205151 19 + 210400635 TTCTCAGAGGAGAGGAGCA i calJac3.chr1 I 1048 C 0 e canFam3.chr10 40831623 142 - 69331447 I a score=87046.000000 s hg38.chr22_KI270876v1_alt 51812 115 + 263666 CACCCTCTAGAGGCTC-TTTCTCAGGCACATCCCTCGCCTCTTCTGGGTTCATGAGCTGTCTTCTGTAGAGCAAGCAGATCTACAGTTACGCTGGGGTGTGGTAAAACCCACCTGA s panTro4.chr22 34429745 115 + 49737984 CACCCCCTAGAGGCTC-TTTCTCAGGCACATCCCTCGCCTCTTCTGGGTTCATGAGCTGTCTTCTGTAGAGCGAGCAGATCTACAGTTACACTGGGGTGTGGTAAAACCCACCTGA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30842975 115 + 46535552 GACCCTCTAGAGGCTC-TTTCTCAGGCACATCGCTCACCTTTTCTGGGTTAATCAGCTGTCTTCTGTACAGCGAGCAGATCTACAGTTACGCTGGGGTGTGGTAAAAACCACCTGA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100398260 114 - 115148730 GACCCTCTAAAGCCTCTTTTCTCAGGCACATCCCTCGCCTTTTCTGGGTTAATCAGCCGTCTTTCGTGGAGCGAGCAGATCT--AGTTACGCTGGGGTGTGGTAAAAACCACCTGA i nomLeu3.chr7b C 0 C 0 s calJac3.chr1 198205170 115 + 210400635 GACCCTCTAGAGGTGT-TTTCTCAGGCACATCCCTCACCTTTTCTGGGTTCATGAGCTGTCTTCTGCAGAGCGAGCAGATCTACAGTCACGCTAGGGTGTGGTAAGAACCACACGA i calJac3.chr1 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e rheMac3.chr10 80546183 1 + 95678458 I e papAnu2.chr10 76228284 0 + 90941950 C e macFas5.chr10 80972999 0 - 96509753 C e chlSab2.chr19 18499573 0 + 33263144 C a score=61492.000000 s hg38.chr22_KI270876v1_alt 51927 147 + 263666 GGACggcccggcgcggtggc-tcacgcctgtaatcccaacacttt-gggaggcggaggtgggcagatcacaaggtcaggagatcgagaccagcctgaccaacattgtgaaacaccgtatctactaaaaatacaaaaattagttgggtgt s panTro4.chr22 34429860 129 + 49737984 GGACGGCcc-------------------tgtaatcccaacacttt-gggaggcggaggcgggcagatcacaaggtcaggagatcgagaccagcctgaccaacattgtgaaacaccgtatctactaaaaatacaaaaattagctgggtgt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30843090 147 + 46535552 GGATggcctggcgcggtagc-tcacgcctgtaatgccaaaacttt-gggaggcggaggcgggcagatcacaaggtcaggagatcaagaccagcctgaccaacatcgtgaaaccccgtatctactaaaaatacaaaaatcagctgggtgt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100398374 147 - 115148730 GGATGGca-ggctcggtggcttcatgcctgc-atcccaacactttggggaggcggaggcgggcagatcacaaggtcaggagattgagaccggcctgaccaacatcatgaaaccctgtacctactaaaaatacaaaaattagctgggtgt i nomLeu3.chr7b C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198205285 0 + 210400635 C e rheMac3.chr10 80546183 1 + 95678458 I e papAnu2.chr10 76228284 0 + 90941950 C e macFas5.chr10 80972999 0 - 96509753 C e chlSab2.chr19 18499573 0 + 33263144 C a score=2100.000000 s hg38.chr22_KI270876v1_alt 52074 1 + 263666 g s panTro4.chr22 34429989 1 + 49737984 g i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30843237 1 + 46535552 g i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100398521 1 - 115148730 g i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 80972999 1 - 96509753 g i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76228284 1 + 90941950 g i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18499573 1 + 33263144 g i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198205285 0 + 210400635 C e rheMac3.chr10 80546183 1 + 95678458 I a score=349990.000000 s hg38.chr22_KI270876v1_alt 52075 162 + 263666 gtggcacgtgcctgtaatcccagctacttgggaggctgaggcaggaaaattgcttgaatcccgggaggcagaggttgcagtaagctgagatcgtgccgctgtactccagcctggtgacagagtgagactccatctcaa-------gaaaaaaaaaaa---------gaaC---CACATGAA s panTro4.chr22 34429990 169 + 49737984 gtggcacgtgcctgtaatcccagctacttgggaggctgaggcaggaaaattgcttgaatcc-gggaggcagaggttgcagtaagctgagatcgtgccactgtactccagcctggtgacagagtgagactccatctcaa-------gaaaaaaaaaaaaa-aaaaaagaaC---CACATGAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30843238 167 + 46535552 gtggcacgtgcctgtaatcccagctacttgggaggctgaggtaggagaattgcttgaacct-gggaggcagaggttgcagtgagctgagatcgtgccgctgcactccagcctggtgacagagtgagactccgtctcaa-------gaaaaaaaaaaa---aaaaaagaaC---CACATGAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100398522 160 - 115148730 gtggcacatgcctgtaatcccagctactttggaggctgaggcaggagaattgcttgaaccc-gggaggcagaggttgcagtgagctgagatggtgctgctgcactccagcctggtgacagagtgagactccgtctcaa-------aaaaaaaaaaag----------aaC---CACATGAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80546184 170 + 95678458 gtggcacctgcctgtgatcccagctacttgggaggctgaggcaggagaatctcttgaaccc-gggaggcagaggttacagtgagccgagatcgtgccactgcactccagcctggcgacagagtgagactccatctcaa-------aaaacaaaacaaaacaaaaaaaaCC---CACACGAA i rheMac3.chr10 I 1 C 0 s macFas5.chr10 80973000 175 - 96509753 gtggcacctgcctgtgatcccagctacttgggaggctgaggcaggagaatctcttgaaccc-gggaggcagaggttacagtgagccgagatcgtgccactgcactccagcctggcgacagagtgagactccatctcaaaa--aacaaaacaaaacaaaacaaaaaaaacC---CACACGAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76228285 174 + 90941950 gtggcacctgcctgtgatcccagctacttgggaggctgaggcaggagaatctcttgaaccc-gggaggcagaggttgcagtgagccgagatcgtgccattgcactccagcctggcgacaaagtgagactccatctcaaa------aaaacccaaaaaaacaaaaaaaaccaaacacatgaA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18499574 180 + 33263144 gtggcacctgcctgtgatcccagctacttgggaggctgaggcaggagaatctcttgaaccc-gggaggcagaggttgcagtgagctgagatcgtgccattgcactccagcctggcgacagagtgagactccatctcaacaacaacaacaacaaaaaaaacaaaaaaCAAAAAACATACGAA i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e calJac3.chr1 198205285 0 + 210400635 C a score=1587350.000000 s hg38.chr22_KI270876v1_alt 52237 554 + 263666 GGCTCTACTCAGATCAATCCTAGTCCTGACTCCCACAGCTGGCCTGGCAGGTCCCACAGACACTGAGGGATGTATGGCAGCTCCAGGGCTCTGGTACTGGAGACAGAGAGCTGAATAC-AAAAGAGGCC--GCCTCAAAGAATTCAAAATAACACAGCACGAAGCCAAGTATGGCAAGAATAAAGTCATGCTGCAGAGAGCTCAGAGGCAAACGAGATGATGGGGGCTGGATTATGTCGGAAATGTTCAGAGAAATGGTCTTGAGGGAAAAGGAGGTGGAAGGACAGGCTGTGTGGGAG--AAAAAAAAAGGGGATTTCTggtcaggcatggtggctcacgcctataatcccagcgctttggga-gctgaggcaggcagatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaatcccatctctactaaaaatacaaaaactaaccaggcttggtggcacatgactgtaatttcagctacccaggaggctgagtcaggagaattgcttgaatctgggaggcagaggttgcagtgagccaagatcgtg s panTro4.chr22 34430159 556 + 49737984 GGCTCTACTCAGATCAATCCTAGTCCTGACGCCCACAGCTGGCCTGGCAGGTCCCACAGACACTGAGGGAtgtgtggcagctccagggctctggtactggagacagagagctgaatac-aaaagaggcctggcctcaaagaattcaaaatAACACAGCACGAAGCCAAGTATGGCAAGAATAAAGTCATGCTGCAGAGAGCTCAGAGGCAAGTGAGATGATGGGGGCTGGATTATGTCGGAAATGTTCAGAGAAATGGTCTTGAGGGAAAAGGAGGTGGAAGGACAGGCTGTGTGGGAG--AAAAAAAAAGGGGATTTCTggtcaggcatggcggctcatgcctataatcccagcgctttggga-gctgaggcaggcagatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaatcccatctctactaaaaatacaaaaactaaccaggcttggtggcacacgcctgtaatttcagctacccaggaggctgagccaggagaattgcttgaatctgggaggcagaggttgcagtgagccaagatcgtg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30843405 554 + 46535552 GGCGCTACTCAGATCAATCCTAGTCCTGACGCCCACAGCTGGCCTGGCAGTTCCCACAGACACTGAGGGAtgcgtggcagctccagggctctggtactggagacagagagctgaatac-aaaacaggcctggcctcaaagaattcacaatAACACAGCACGAAGCCAAGTATGGCAAGAATAAAGTCATGCTGCAGAGAGCCCAGAGGCAAGCGAGATGATGGGGGCTGGAGTATGTTGGAAATGTTCAGAGAAGTGGTCTGGAGGGAAAAGGAGGTGGAAGGACAGGCTGTGTGGGAG----AAAAAAAGGGGATTTCTggtcaggcatggtggctcatgcctataatcccagcgctttggga-gcggaggcaggcagatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaatcccatctctactaaaaatacaaaaactaaccaggcgtggtggcccttgcctgtaatttcagctacccaggaggctgagccaggagaatcgcttgaatctgggaggcagaggttgcagtgagccaagatcgtg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100398682 558 - 115148730 GGCTCTACTCAGATCAATCCTAGTCCTGACACCCACAGCTGGCCTGGCAGGTGCCACAGACACTGAGGGATGTGTGGCAGCTCCAAGGCTCTGGTACTGGAGACAGAGAGCTGAATAC-AAAAGAGGCCTGGCCTCAAAGAATTCAAAATAACACAGCACGAAGCCAAGTACGGCAAGAATAAAGTCATGCTGCAGAGAGCTCAGAGGCAAGTGAGATGATGGGGGCTGGAGTATGTCGGAAATGTTCAGAGAAATGGTCTTGAGGGAAAAGGAGGTGGAAGGACAGGCTGTGTGGGAGGGAAAAAAAAGGGGGATTTCTggtcaggcatggtggctcacgcctataatcccagcgctttggga-gctgaggcgggcagatcacttaaggtcaggagttcgagaccagcctggccaacatggtgaaatcccatctctactaaaaatacaaaaactaaccaggcatggtggcacatgcttgtaatttcagctacccaggaggctgagccaggagaatcacttgaatctgggaggcagaggttgcagtgagccaagatcgtg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80546354 554 + 95678458 GGCTCTGCTCAGATCAATCCTAGTCCTGACTCCCACAGCTGGCCTGGCAGGTCCCACAGACACTGAGGGATGCATGGCAGCTCCAGGGCTCTGGCACTGGAGAC--AGAGCTGAATAC-AAAAGAGGCCTGGCCTCAAATAATTCCAAATAACGCAGCACGAAGCCAAGTATGGCAAGGATAAAGTCATGCTGCAGAGAGCTCAGAGGCAAGCGAGATGAAGGGGGCTGGAGTATGTCGGAAATGTTCAGAGAAACGGGCTTGAGGCAAAAGGAGGTGGAAGGACAGGCTGTGTGGGAG--AAAGAAAAAGGGGATTTCTggccaggcatggtggctcacgcctataatcccagtgctttgggaggctgaggcgggcagatcacctgaggttaggagtttgagatcagcttggccaacatggtgaaatcccatctctattaaaaatacaaaaactagccaggcgtgatagcaggcacctataatccatgctattcgggaggctgaggcagga-aatcaattgaacctggggggtggaggttgcagtgcaccaagatcgcg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80973175 554 - 96509753 GGCTCTGCTCAGATCAATCCTAGTCCTGACTCCCACAGCTGGCCTGGCAGGTCCCACAGACACTGAGGGATGCATGGCAGCTCCAGGGCTCTGGCACTGGAGAC--AGAGCTGAATAC-AAAAGAGGCCTGGCCTCAAATAATTCCAAATAACGCAGCACGAAGCCAAGTATGGCAAGAATAAAGTCATGCTGCAGAGAGCTCAGAGGCAAGCGAGATGAAGGGGGCTGGAGTATGTCGGAAATGTTCAGAGAAATGGGCTTGAGGCAAAAGGAGGTGGAAGGACAGGCTGTGTGGGAG--AAAGAAAAAGGGGATTTCTggccaggcatggtggctcacgcctataatcccagtgctttgggaggctgaggcgggcagatcacctgaggttaggagtttgagatcagcttggccaacatggtgaaatcccatctctattaaaaatacaaaaactagccaggcgtgatagcaggcacctataatccatgctattcgggaggctgaggcagga-aatcaattgaacctggggggtggaggttgcagtgaaccaagatcgcg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76228459 553 + 90941950 GGCTCTGCTCAGATCAATCCTAGTCCTGACTCCCACAGCTGGCCTGGCAGGTCCCACAGACACTGAGGGATGCATGGCAGCTCCAGGGCTCTGGCACTGGAGAC--AGAGCTGAATAC-AAAAGAGGCCTGGCCTCAAATAATTCCAAATAACGCAGCACGAAGCCAAGTATGGCAAGAATAAAGTCGTGCTGCAGAGAGCTCAGAGGCAAGCGAGATGAAGGGGGCTGGAGTATGTCGGAAATGTTCAGAGAAATGGTCTTGAGGCAAAAGGAGGTGGAAGGACAGGCTgtgt-ggag--aaagaaaaaggggatttctggccaggcatggtggctcacgcctataatcccagtgctttgggaggctgaggcgggcagatcacttgaggtcaggagtttgagatcagcttggccaacatggtgaaatcccatctctattaaaaatacaaaaactagccaggcgtgatagcaggcacctataatccatgctattcgggaggctgaggcagga-aatcaattgaacctggggggtggaggttgcagtgaaccaagatcgcg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18499754 556 + 33263144 GGCTTTGCTCAGATCAATCCTAGTCCTGACTCCCATAGCTGGCCTGGCAGGTCCCACAGACACTGAGGGATGCATGGCAGCTCCAGGGCTCTGGCACTGGAGACAGAGAGCTGAATAC-AAAAGAGGCCTGGCCTCAAATAATTCCAAATAACGCAGCACGAAGCCAAGTATGGCCAGAATAAAGTCACGCTGCAGAGAGCTCAGAGGCAAGCGAGATGAAGGGGGCTGGAGTATGTCGGAAATGTTCAGAGAAATGGTCTTGAGGCAAAAGGAGGTGGAAGGACAGGCTGTGTGGGAG--AAAGAAAAAGGGGATTTCTggccaggcgtggtggctcatgcctataatcctggtgctttgggaggctgaggtgggcagatcacttgaggtcaggagtttgagatcagcttggccaacatggtgaaatcccatctctattaaaaatacaaaaactagccaggtgtgatagcaggcacctataatccatgctatttgggaggctgaggcagga-aatcaattgaacctgggcggtggaggttgcagtgaaccaagatcgtg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198205285 543 + 210400635 GGCTCTGCTCAGATCCATCCTAGTCCTGACACCCACAGCAGGCCTGGCAGATCCCACGGACACTGAGGGATGTCTGGCAGCTCCAGGGCTCTGGTACTGAAGACAGAGACCTAAATACTAAAAAAGTCCTGGCCTCAGAGAATTCAAAATAA--CAGCACAGAGCCAAGTATGGCAAGGGT--AGTCACGCTGCAGAGAGCCCAGAGGGAAGCGAGGCAACGGGGGC----------CGGAAATGTTCAGAGAAACGGTAGTGAGGGAAAATGGGGTGAAAGGACAGCCTGTGTGGGAG---AAAAGAAAGGGGATTTCTggccatgtatggtggctcacgcgtgtaatcccagcattttgggaggctgaggcgggcagatcacttgaggtcaggagtttgagatcagcctggccaacgtggcgaaaccccgtctctactaaaaatacaaaaattagccaggggtggtggccggcaccagtaatcccagctacttgggaggctgacacaggagaactgcttgaaccccggaggcagaggttgcagtgagctaagatggca i calJac3.chr1 C 0 I 830 e canFam3.chr10 40831623 142 - 69331447 I a score=134254.000000 s hg38.chr22_KI270876v1_alt 52791 51 + 263666 cca-ctgcactctggcttgggtgacagagtgagactccatctcaaaaaaaaa s panTro4.chr22 34430715 51 + 49737984 cca-ctgcactctggcttgggtgacagagtgagactccatctcaaaaaaaaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30843959 51 + 46535552 cca-ctgcactccggcttgggcgacagagcgagactccatctcaaaaaaaaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100399240 51 - 115148730 cca-ctgcactccggcttgggtgacagagtgagactccatctcagaaaaaaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80546908 52 + 95678458 ccgcccgcactgcggcctgggtgacagagtgagagtccctctcaaaaaaaaa i rheMac3.chr10 C 0 I 11 s macFas5.chr10 80973729 52 - 96509753 ccacccgcactgcggcctgggtgacagagtgagagtccctctcaaaaaaaaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76229012 52 + 90941950 ccacccgcactccggcctgggtgacagagtgagagtccctctcaaaaaaaaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18500310 52 + 33263144 ccacccgcactccagcctgggtgacagagtgagagtccttctcaaaaaaaaa i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198206658 51 + 210400635 cca-ctgcactccagcctgggcaatagagcgagactccatctcaacaacaac i calJac3.chr1 I 830 C 0 e canFam3.chr10 40831623 142 - 69331447 I a score=-11279.000000 s hg38.chr22_KI270876v1_alt 52842 40 + 263666 aaaaaaaagaaagaaagaaaaGAAAAGAAAGAAATGAACG s panTro4.chr22 34430766 34 + 49737984 aaaaaaaa------aagaaaagaaaaGAAAGAAAAGAACG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30844010 25 + 46535552 aaaaaaag---------------aaagaaagaaaGACACG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100399291 27 - 115148730 aaaaaaaa-------------gaaaagaaagaaaGAAACG i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 80973781 2 - 96509753 ------------------------------GA-------- i macFas5.chr10 C 0 I 9 s papAnu2.chr10 76229064 14 + 90941950 -------------------------agagggaagggggC- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18500362 12 + 33263144 --------------------------GAGGGAGGGGGG-- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198206709 15 + 210400635 ------------------aacaaaaaGGTGGAA------- i calJac3.chr1 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I e rheMac3.chr10 80546960 11 + 95678458 I a score=448500.000000 s hg38.chr22_KI270876v1_alt 52882 165 + 263666 GTGGGGGGG--------CATTCAGTGGCTGGTGGCTGGG-CCAGGGCATGCACTCCTACCTCGAGCCAGATCCGGGTGTAGGTCCCTGCCCTTGCAGACCCTGGTCATGTCCTAGGTCCTTgcggtgaacagacaaggaagg-cccccgcccttgtgggacttacaatctcgtgg s panTro4.chr22 34430800 173 + 49737984 GTGGGGGGGGGGCGGGGCATTCAATGGCTGGTGGCTGGG-CCAGGGCATGCACTCCTACCTCGAGCCAGATCCGGGTGTAGGTCCCTGCCCTTGCAGACCCTGGTCATGTCCTAGGTCCTTgcggtgaacagacaaggaagg-cccccgcccttgtgggacttacaatctcgtgg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30844035 166 + 46535552 TTGGGGGGG--------AATTCAATGGCTGGTGGCTGGGCCCAGGGCATGCACTCCTACCTTGAGCCAGATCCGGGTGTAGGTCCCTGCCCTTGCAGACCCTGGTCATGTCCTAGGTCCTTgcggtgaacagacaaggaagg-cccccgcccttgtgggacttacaatctcgtgg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100399318 165 - 115148730 GTTGGGGGG--------AGTTCGATGGCTGGTGGCTGGG-CCAGGGCATGCACTCCTACCTTGAGCCAGATCCGGGTGTAGGTGCCTGCCCTTGCAGACCCTGGTCATGTCCTAGGTCCTTgcggtgaacagacaaggaagg-cccctgcccttgtgggacttacagtctcgtgg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80546971 162 + 95678458 CTGGGCCGG--------AATGCAATGGCTGGTGGCTGGG-CCAGGGCATGTACTCCTACCTGGAGTCAGATCCGGGTGTAGGTCTCTGCCCTTGCAGACCCTGGTCACGTCCTAGTTCCTTGTGGTGaacagacaaggacgg-ccc---cccttgtgggacttacaatctggtgg i rheMac3.chr10 I 11 C 0 s macFas5.chr10 80973792 162 - 96509753 CTGGGCCGG--------AATGCAATGGCTGGTGGCTGGG-CCAGGGCATGTACTCCTACCTGGAGCCAGATCCGGGTGTAGGTCTCTGCCCTTGCAGACCCTGGTCACGTCCTAGTTCCTTGTGGTGAACAGACAAGGACGG-CCC---CCCTTGTGGGACTTACAATCTGGTGG i macFas5.chr10 I 9 C 0 s papAnu2.chr10 76229078 161 + 90941950 -CGGGCCGG--------AATGCAATGGCTGGTGGCTGGG-CCAGGGCATGTACTCCTACCGGGAGCCAGATCCGGGTGTAGGTCTCTGCCCTTGCAGACCCTGGTCACGTCCTAGGTCCTTGTGGTGAACAGACAAGGACAG-CCC---CCCTTGCGGGACTTACAATCTGGTGG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18500374 163 + 33263144 CCGGGCCGG--------AATGCAATGGCTGGTGGCTGGG-CCAGGGCATGTACTCCTACCTGGAGCCAGATCCGGGTGTAGGTCTCTGCCCTTGcagaccctggtcacgtcctaggtccttgtggtgaacagacaaggacggcccc---cccttgcgggacttacaatctggtgg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198206724 153 + 210400635 -------------------TTCAATGGCTGGTGGCTGGA-CCAGGGCATGCACACCTGCCTCAAGCCAGATCTGCATGTAGGTCCCTGACTTT-CAGACCTTGGTCATGTCCTAAGTCCTTGCGGCaaatagacaaggaagg-cccctgcccttgtgagacttacaatctggtgg i calJac3.chr1 C 0 C 0 e canFam3.chr10 40831623 142 - 69331447 I a score=585948.000000 s hg38.chr22_KI270876v1_alt 53047 185 + 263666 ggATGGTC--TTTGAGGTCCCTTTCAGTTTGGGCTCC----TCATTGCTGATTCTAAGCCTGAA-A----GATGGTTTGAGGCCAGGACAGGGAGGTACCTTCAATGCCGGGCTAAGGAGTTTAGAATTTTGCCCACGGACAACAGAAGCCGTCCATGGAGATGGAGCAGGCGCTTATCTGAGAACAAAGGTGTTT s panTro4.chr22 34430973 185 + 49737984 ggATGGTC--TTTGAGGTCCCTTTCAGTTGGGGCTCC----TCATTGCTGATTCTAAGCCTGAA-A----GATGGTTTGAGGCCAGGACTGGGAGGTGCCTTCAATGCTGGGCTAAGGAGTTTAGAATTTTGCCCACGGACAACAGAAGCCGTCCATGGAGATGGAGCAGGAGCTCATCTGAGAACAAAGGTGTTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30844201 184 + 46535552 ggATGGTC--TTTG-GGTCCCTTTCAGTTTGGGCTCC----TCATTACTGATTCTAAGCCTGAA-A----GATGGTTTGAGGCCAGGACTGGGAGGTGCCTTCAATGCCGGGCTAAGGAGTTTAGAATTTTGCCCACAGAAAACAGAAGCCATCCATGGAGATGGAGCAGGAGCTCATCTGAGAACAAAGGTGTTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100399483 184 - 115148730 ggATGGTC--TTTGAGGTCCCTTTCAGCATGGGCTCC----TCATTACTGATTCTAAGCCTGAA-A----GATGGTTTGAGGCCAGGACTGGGAGGTGCCTTCAATGCCGGGCTAAGGAGTTTAGAATTTTGCCCACAGACAACAGAAGCTGTCCATGGAGATGGAGCA-GAGCTCATGTGAGAACAAAGGTGTTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80547133 185 + 95678458 ggATGGTC--TTTGAGGTCCCTTTCAGTTTGGGCTCC----TCGTTATTGATTCTAAGCTTGAA-A----GACGGTCTGAGGCCAGGACCGGGAGGTGCCGTCAATGCCGGGCTGAGGAGTTTAGAATTTTGCCCACAGACAGCAGAAGCCGTCCATGGAGATGGAGCAGGAGCTCATCTGAGAACAAAGGTGTTC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80973954 185 - 96509753 GGATGGTC--TTTGAGGTCCCTTTCAGTTTGGGCTCC----TCGTTATTGATTCTAAGCTTGAA-A----GACGGTCTGAGGCCAGGACCGGGAGGTGCCGTCAATGCCGGGCTGAGGAGTTTAGAATTTTGCCCACAGACAGCAGAAGCCGTCCATGGAGATGGAGCAGGAGCTCATCTGAGAACAAAGGTGTTC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76229239 185 + 90941950 GGATGGTC--TTTGAGGTCCCTTTCAGTCTGGGCTCC----TCGTTATTGATTCTAAGCCTGAA-A----GACGGTCTGAGGCCAGGACCGGGAGGTGCCGTCAATGCCGGGCTGAGGAGTTTAGAATTTTGCCCACAGACAGCAGAAGCCGTCCATGGAGATGGAGCAGGAGCTCATCTGAGAACAAAGGTGTTT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18500537 185 + 33263144 ggATGGTC--TTTGAGGTCCCTTTCAGTTTGGGCTCC----TTGTTATTGATTCTAAGCCTGAA-A----GACGGTCTGAGGCCAGGACCGGGAGGTGCCTTCAATGCCAGGCTGAGGAGTTTAGAATTTTGCCCACAGACAACAGAAGCCGTCCATGGAGATGGAGCAGGAGCTCATCTGAGAACAAAGGTGTTT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198206877 182 + 210400635 ggATGGCC--TCTGAGGTCCCTTTCAGTTAGGGACCCTCATTCATTAGTGATTCTAAGCCTGAAGA----GATGGTTTGA-GCCAGGACAGAAAGGTGCCTTCAATGCCTCGCGAAGAAGTTTAGAATTTTGCCCACAGACAACAGAAGTCTTCCATAGCAATGGAGCAGGAGCTCGTCTG-------AGGTGTCT i calJac3.chr1 C 0 I 263 s canFam3.chr10 40831765 165 - 69331447 GGATGATCATCTTCGGCTCTCTTTCAGCTGGGGTTGC----TCATTATTGATTCTAAGCCTGGA-AAGCTGATGGTCTGA-GCCAGAACTGTAGGGTGCCCC---------------GAGTTTAGAATTTCACTCAGCGAAAACAGACGGCTTCCATGGAGATGGAGC-GGAGAGAATCTGAGAGCC--------- i canFam3.chr10 I 142 C 0 a score=296244.000000 s hg38.chr22_KI270876v1_alt 53232 94 + 263666 AGGAAGAGTGATCTCGCGGAGAGGCACAGAACCACAATCCTTGAATA----TTCCCACTGACTCCCTCATACCCTGGCTG-CCTCTTCCCTGCATTTaa s panTro4.chr22 34431158 94 + 49737984 AGGAAGAGTGATCTCGCGGAGACACACAGAACCACCATCCTTGAATA----TTCCCACTGACTCCCTCATACCCTGGCTG-CCTCTTCCTTGCATTTAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30844385 94 + 46535552 AGGAAGAGTGACCTGGCTGAGAGGCACAGAACCACAATCCTTGAATA----TTCCCACTGACTCCCTCATACCCTGGCTG-TCTCTTCCCTGCATTTAC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100399667 94 - 115148730 AGGAAGACTGATCTGGCTGAGAGGCACAGAACCACAATCCTTGAATA----TTTCCACTGACTCCCTCATACCCTGGCTG-CCTCTTCCCTGCATTTaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80547318 94 + 95678458 AGGAAGAGTGATCTGGCTGAGAGGGACAGAACCACGATCCTTGAATA----TTTCCATTGACTCCGTCATACCCTGGCTG-CCTCTTCCCTGCATTTAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80974139 94 - 96509753 AGGAAGAGTGATCTGGCTGAGAGGGACAGAACCACGATCCTTGAATA----TTTCCATTGACTCCGTCATACCCTGGCTG-CCTCTTCCCTGCATTTAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76229424 94 + 90941950 AGGAAGAGTGATCTGGCTGAGAGGGACAGAACCACGATCCTTGAATA----TTTCCATTGACTCCGTCATACCCTGGCTG-CCTCTTCCCTGCATTTAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18500722 94 + 33263144 AGGAAGAGTGATCTGGCTGAGAGGGACAGAACCACGATCCTTGAATA----TTTCCATTGATTCCGTCATACCCTGGCTG-CCTCTTCCCTGCATTTAA i chlSab2.chr19 C 0 I 7 s calJac3.chr1 198207322 94 + 210400635 AGGAGGAGAGAGGTGGCTGAGAGGCACAAAACCACGATCCTTGAATG----TTTCCATTGACCCCATCATACCCTAGCTG-CCTCTTCCCTGTACTTAA i calJac3.chr1 I 263 C 0 s canFam3.chr10 40831930 91 - 69331447 ------GGTGAGGTGGCCCAGGTGCACAGAGCCACGGCCCTTGCATACAGCTGCTCGCTGACCCAGACGAGCC--GGCTGCCCCCTTCCTTGCGTTTAT i canFam3.chr10 C 0 C 0 a score=19612.000000 s hg38.chr22_KI270876v1_alt 53326 12 + 263666 ------attaataggctt s panTro4.chr22 34431252 12 + 49737984 ------ATTAATAGGCTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30844479 11 + 46535552 ------ATTAATA-GCTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100399761 12 - 115148730 ------attaataggctt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80547412 12 + 95678458 ------ATCAATAGGCTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80974233 12 - 96509753 ------ATCAATAGGCTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76229518 12 + 90941950 ------ATCAATAGGCTT i papAnu2.chr10 C 0 C 0 s calJac3.chr1 198207416 12 + 210400635 ------ATCAACGGGCTT i calJac3.chr1 C 0 I 340 s canFam3.chr10 40832021 12 - 69331447 GGaaaaatttat------ i canFam3.chr10 C 0 C 0 e chlSab2.chr19 18500816 7 + 33263144 I a score=16892.000000 s hg38.chr22_KI270876v1_alt 53338 16 + 263666 taacattaatagactt s panTro4.chr22 34431264 16 + 49737984 Taacattaatagactt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30844490 16 + 46535552 TAACATTaatagactt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100399773 16 - 115148730 taacattaatagactt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80547424 10 + 95678458 TAACGTGAAt------ i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80974245 10 - 96509753 TAACGTGAAt------ i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76229530 10 + 90941950 TAACGTGAAT------ i papAnu2.chr10 C 0 C 0 s calJac3.chr1 198207768 16 + 210400635 taaaattaatagactt i calJac3.chr1 I 340 C 0 s canFam3.chr10 40832033 10 - 69331447 tgacattatt------ i canFam3.chr10 C 0 C 0 e chlSab2.chr19 18500816 7 + 33263144 I a score=414859.000000 s hg38.chr22_KI270876v1_alt 53354 143 + 263666 -------tattttttagagtaaatttgagtggaaagcgcagagagctcccccacaccctctcccctcaccctagaccatcatcatccagcaccatgtggtaacatttgttaccactgatgaaccttcatagagacagcaATCCCAGCCTT s panTro4.chr22 34431280 143 + 49737984 -------tattttttagagtaaatttgagtggaaagcgcagagagctcccccacaccctctcccctcaccctagaccatcatcatccagcaccatgtggtaacatttgttaccactgatgaaccttcatagagacagcaATCCCAGCCTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30844506 142 + 46535552 -------tatttttt-gagtaaatttgagtggaaagcacagagagctcccccacaccctctcccctcaccttagaccatcatcatccagcaccgtgtggtaacatttgttaccactgatgaaacttcatagagacatcaATCCCAGCCTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100399789 143 - 115148730 -------tattttttagagtgaattggagtggaaagcacagagagctgccccacaccctctcccctcaccctaggccatcatcatctagcaccatgtggtaacatttgttaccactgatgaaccttcatagagacatcaATCCCAGCCTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80547434 141 + 95678458 -------tatgttttagagtaaatt-gagtggaaagcacagagcgctcccccacaccctctcccctcaccctagaccatcatcatccag-accgtgtggtaacatttgtcaccaccgatgaaccttcgtagagacattaGTCCCAGCCTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80974255 141 - 96509753 -------tatgttttagagtaaatt-gagtggaaagcacagagcgctcccccacaccctctcccctcaccctagaccatcatcatccag-accgtgtggtaacatttgtcaccaccgatgaaccttcgtagagacatcaGTCCCAGCCTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76229540 141 + 90941950 -------TATGTTTTAGAGTAAATT-GAGTGGAAAGCACAGAGCGCTCCCCCACACCCTCTCCCCTCACCCTAGACCATCATCATCCAG-ACCGTGTGGTAACATTGGTCACCACCGATGAACCTTCGTGGAGACATCAGTCccagcctt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18500823 141 + 33263144 -------TATGTTTTAGAGTaaatt-gagtggaaagcacagagcgctcccccacaccctctcccctcaccctagaccatcatcatccag-accgtgtggtaacatttgttaccaccgatgaaccttcgtagagacatcaGTCCCAGCCTT i chlSab2.chr19 I 7 C 0 s calJac3.chr1 198207784 136 + 210400635 -------tatgttttagagtaaatgtgagtggaaagcgcaga--gttcccccaaaccctctcccct-----tagaccagcaccatccagcagcatgtgctaacacttgttaccactgatgaaccgttacggagacatcaATCCCAGCCTT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40832043 130 - 69331447 ttttagacgggttttagagcaaaatggagtgg-aagtacagggttcctgcctgccccctctccc---aacccacaca-------------AGCGTGGGG---AGTGTATGACCGTTGGTCAGGCCGCACCGAGACATTAATACCAGCCTT i canFam3.chr10 C 0 I 3 a score=190617.000000 s hg38.chr22_KI270876v1_alt 53497 77 + 263666 TTTAAAAACGAGCTTTTCAgcccagcgtggtagctcacgcct----ctaatctcagcactttgggaggccgaggtgggtgg s panTro4.chr22 34431423 77 + 49737984 TTTAAAAACGAGCTTTTCggcccagcgtggtagctcacgcct----ctaatctcagcactttgggaggccgaggtgggtgg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30844648 77 + 46535552 TTCAAAAACAAGCTTTTTggcccagcatggtagctcacgcct----gtaatctcagcactttgggaggccgaggtgggtgg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100399932 81 - 115148730 TTTAAAAACGAGCTTTTCggcccggcgcggtagctcacgcctgtaagtaatctcagcactttgggaggccgagttgggtgg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80547575 77 + 95678458 TTTAAAAACAAGCTTTTCAgcccggtacggtggctcacgcct----gtaatcccagcactttgggaggccaaggtgggtgg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80974396 77 - 96509753 TTTAAAAACAAGCTTTTCAgcccggtacggtggctcacgcct----gtaatcccagcacttcgggaggccaaggtgggtgg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76229681 77 + 90941950 tttaaaaacaagcttttcagcccggtgcggtggctcacgcct----gtaatccctgcactttgggaggccaaggtgggtgg i papAnu2.chr10 C 0 M 561 s chlSab2.chr19 18500964 77 + 33263144 TTTAAAAACAAGCTTTTCAgcccggcatggtgattcacgcct----gtaatcccagcactttgggaggccaaggtgggtgg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198207920 52 + 210400635 TTTAAAAACAAGCTTTTCGGCTGGCAACCgtggctcacactt----gtaatcccag------------------------- i calJac3.chr1 C 0 C 0 e canFam3.chr10 40832173 3 - 69331447 I a score=323433.000000 s hg38.chr22_KI270876v1_alt 53574 154 + 263666 gtcacttgaggtcaggagttcaaaaccagcctgatcaacatggtgaaactctgtctccagttaaaagaaaaaaaaata-------caatattagccaggcgtggtggtgcacacctgtaatcccagctacttgggaggctgaggcaggagaatcacttgaa s panTro4.chr22 34431500 154 + 49737984 gtcacttgaggtcaggagttcgaaacccgcctgatcaacatggtgaaactctgtctgcagttaaaagaaaaaaaaata-------caatattagccaggcgtggtggtgcacacctgtaatcccagctacttgggaggctgaggcaggagaatcacttgaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30844725 154 + 46535552 atcacttgaggtcaggagttcgaaaccaccctgatcaacatggtgaaactccgtctccagttaaaagaaaaaaaaata-------caatattagccaggcgtggtggcgcacacctgtaatcccatctacttgggaggctgaggcaggagaatcacttgaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100400013 148 - 115148730 atcacttgaggtcaggagttcgaaaccagcctgatcaacgtgatgaaactccg-----agttaaaagaaaaaaaaata-------caatattag-caggcgtggtggtgcacacctgtaatcccagctacttgggaggctgaggcaggagaatcacttgaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80547652 155 + 95678458 atcacttgaggtcaggagtttgagaccagcctgatcaacatggtgaaactttgtctccagtgaaaaaaaaaaaaaaca------acaatattagtcaggcatggtggtgcacacctgtaatcccagctacttgggaggctgaggcaggagaatcatttgaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80974473 161 - 96509753 atcacttgaggtcaggagtttgagaccagcctgatcaacatggtgaaactttgtctccagtaaaaaaaaaaaaaaaaaaaaaatacaatattagtcaggcatggtggcgcacacctgtaatcccagctacttgggaggctgaggcaggagaatcatttgaa i macFas5.chr10 C 0 C 0 s chlSab2.chr19 18501041 155 + 33263144 atcacttgaggtcagaagtttgagaccagcctgatcaacatggtgaaactttgtctccagttaaaaaaaaaaaaaaaa--aaatacaatatt----aggcatggtggcgcacacctgtaatcccagctacttgggaggctgaggcaggagaatcatttgaa i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198207972 141 + 210400635 -tcacttgaggtcaggagttcgagactagcct----aacatggtgaaactcctcctctgattaaaaaaaaaaaagtta---------------gccaggtatggtagcgcacacctgtaatcccagctacttgggaggctaaggcagaagaatcacttgaa i calJac3.chr1 C 0 C 0 e canFam3.chr10 40832173 3 - 69331447 I e papAnu2.chr10 76229758 561 + 90941950 M a score=217777.000000 s hg38.chr22_KI270876v1_alt 53728 109 + 263666 ctcaggaggcggaggttgcagtgagccgagattgcaccattacacttcaccctgggcaacaggagcaaaactccatctc--aaaacaaaacaaaacaaaacaaac--aac-aaa s panTro4.chr22 34431654 109 + 49737984 ctcaggaggcggaggttgcagtaagctgagattgcaccattacacttcagcctgggcaacaaaagcaaaactccatctc--aaaacaaaacaaaacaaaacaaac--aac-aaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30844879 112 + 46535552 cccaggaggcagaggttgcagtaagccgagattgcaccattacacttcagcctgggcaacaagagcaaaactccgtctc--aaaacaaaacaaaacaaaacaaatcaaacaaaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100400161 98 - 115148730 cccaggaggcagaggttgcagtaagctgagatcgcaccattacacttcagcctgggcaacaagagcaaaactccacctc--aaaacaaaac------aaacaaat--------a i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80547807 91 + 95678458 cccaggaggcggaggtggcagtgagccaagatcacaac-ttacacttcagcctgggcaataagagcgaaactctgtctc---------aa-------aaaaaaaa------aaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80974634 94 - 96509753 cccaggaggcggaggtggcagtgagccaagatcacaac-ttacacttcagcctgggcaataagagcgaaactctgtctc------aaaaa-------aaaaaaaa------aaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76230319 100 + 90941950 cccaggaggcggaggtggcagtgagccaagatcacaac-ttacacttcagcctgggcaataagagcgaaactctgtctcaaaaaaaaaaa-------aaaaaaaa------aaa i papAnu2.chr10 M 561 C 0 s chlSab2.chr19 18501196 98 + 33263144 cccaggaggcggaggtggcagtgagccaagatcacaac-ttacacttcagcctgggcaataagagcgaaactccgtctc--aaaaaaaaa-------aaaaaaaa------aaa i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198208113 99 + 210400635 cccatgaggcgaaggttgcagtgagccaagatcgtgccattgtactccatcctgggcaacaagaacaaaactcagtctc--aaagtaaat-------aaataaat------aaa i calJac3.chr1 C 0 C 0 e canFam3.chr10 40832173 3 - 69331447 I a score=1732036.000000 s hg38.chr22_KI270876v1_alt 53837 562 + 263666 AAAAGAGCTCTTCTGTTCTCTGTCTCTCA------------------GCACCCTTTGAGAAGATGGCAAGATCCAAAAATCCTGTA--GTGGCGGATTCCAGCCAGTGtgcacattaagatcatctttggcctcttcacaaaatccagatgctcagaccccacttggaccgaatgagttggagcctgcgggtctgcagcctgggTGTGTAAAT-AGGGCTCTGATTTGCTCCTTTGGTTGAGAACCTCCAATATTTGGCCTAGAACTGGGTCGGGCAGTCTCC-AAAATGGAGGCACCATTTTCCTGACATGCCGCTGTGTGGTGCCAGCTTTTGTGACCACTTGGTCACAAT-----TGCTCCTGTACAG----TTTCTGTTGGGACTTAGTGAATGCACAGGCATTTTACGAGCTGCGAGGCAGAAAGGACTGAGCTCCCAGGGGAAGGTG-GAGCGCTCAGGTGGGAGTGCACGATGGGATCAGCCCCGTGCCTGGGAC----TGAGCATTTGTTTAGACTTGATTTCCACCCGGAGAGACAAGTTCTGTTATCAACAATACA-GAGTCAGCACTTCCACCTTGGGAGGGGCCCCA s panTro4.chr22 34431763 549 + 49737984 aaaaGAGCTCTTCTGTTCTCTGTCTCTCA------------------GCACCCTTTGAGAAGATGGCAAGATCCAAAAATCCTGTA--GTGGCGGATTCCAGCCAGTGtgcacattaagatcatctttggcctcttcacaaaatccagatgctcagatcccacttggaccgaatgagttggagcctgcgggtctgcagcctgggtgtGTAAAT-AGGGCTCTGATTTGCTCCTTTG-------------AATATTTGGCCTAGAACTGGGTCGGGTAGTCTCC-AAAATGGAGGCACCATTTTCCTGACATGCCGCTGTGTGGTGCCAGCTTTTGTGACCACTTGGTCACAAT-----TGCTCCTGTACAG----TTTCTGTTGGGACTTAGTGAATGCACAGGCATTTTACGAGCTGCGAGGCAGAAAGGACTGAGCTCCCAGGGGAAGGTG-GAGCGCTCAGGTGGGAGTGCACGATGGGATCAGCCCCGTGCCTGGGAC----TGAGCATTTGTTTAGGCTTGATTTCCACCCGGAGAGACAAGTTCTGTTATCAACAATACA-GAGTCAGCACTTCCACCTtgggaggggcccca i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30844991 561 + 46535552 aaaaGAGCTTTTCTGTTCTCTGTCTCTCG------------------GCACCCTTTGAGAAGATGGCAGGATCC-AAAATCCTGTA--GTGGCAGATTCCAGCCAGTGtgcacattcagatcatctttggcctcttcacaaaatccagatgctcagaccccacttggaccgaatgagttggagcctgcgggTCTGCAGCCTGGGTGTGTAAAT-AGGGCTCTGATTTGCTCCTTTGGTTGAGAACCTCCAATATTTGGCCTAGAACTGGGTCAGGTAGTCTCC-AAAATGGAGGCACCATTTTCCCGATATGCCGCTGTGTGGTGCCAGCTTTTGTGACCACTTGGTCACAAT-----TGCTCCTGTGCAG----TTTCTGATGGGACTTAGTGAATGCACAGGCATTTTACGAGCTGCGAGGTAGAAAGAACTGAGCTCCTAGGGGAAGGCG-GAGCGCTCAGGTGGGAGTGCACAATGGGATCAGCCCCGTGCCTGGGAC----TGAGTATTTGTTTAGGCTTGATTTCCACCTGGAGAGACAAGTTCTGTTATCAACAATACA-GAGTCAGCACTTCTGCCTTGGGAGGGGCCCCA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100400259 539 - 115148730 aaaaGAGCTCTTCTGTTCTCTGTCTCTCG------------------GCACCCTTTGAGAAGATGGCAGGATCC-AAAATCCTGTA--GTGGCGGATTCCAGCCAGCGTTcacattaagatcatctttggcctcttcacaaaattcagatgctcagaccccacttggaccgaatgagttggagcctgcgggTCTGCAGCCTGGGTGTGTAAAT-AGTGCTCTGATTTGCTCCTTTGGTTGAGAACCTCCAATATTTGGCCTAGAACTGGGTTGGGTAGTCTCC-AAAATGGAGGCACCATTTTCCCGATATGCCGCTGTGTGGTGCCAGCTTTTGCGACCACTTGGTCACAAT-----TGCTCCTGTACAG----CTTCTGACGGGACTTAGTGAATGCACAGGCATTTTAC----------------------GAGCTCCCAGGGGAAGGCG-GAGCGCTCGGGTGGGAGTGCACGATAGGGTCAGCCCCATGCCTGGGAC----TGAGCATTTGTTTAGGCTTCATTTCCTACTGAAGGGAC-AGTTCTGTTATCAACATTACACCAGTCAGCACTTCTGCCTTGGGAGGGGCCCCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80547898 554 + 95678458 aaaaGACCTTTTCTGTTCTCTGTCTCTCG------------------GCACGCTTTGAGAAGACGGCAGGATCC-AAAATCCTGTA--GTGGCAgattccaaccagcgtgcacattaggatcatctttggcctcttcacaaaatccagatgctcagaccccacttggacccaatgagttggaacctgcgggtctgcagcctgggcgtGTAAAT-GGGGCTCTGATTTGCTCCTTTGGTTGAGAACCTCCGATATTCGGCCTAGAACTGGGTCAGGCAGTCTCC-AACATGGAGGCATCGTTTTCCCGACATGCCGCTGTGTGGTGCCAGCTTTTGTGACTACTTGGTCACAAT-----TGCTCCTGTGCAG----TTTCTGACGGGACTTAGTGAATGCACAGGCATTTTACGAGCTGTGAGGTAGAAGGAACTGAGCTCCCAGGGGAAGGCG-GAGC------GTGGGAGTGCGTGATGGGATCAGCCCTGTCCCTGGGAC----TGAGCATTTGTTTAGGCTTGATTTCCACCTGGAGAGACAAGTTCTGTTATCAACAATACA-GAGTCAGCACTTCCGCCTTGGGAGGGG-CCCA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80974728 554 - 96509753 aaaaGACCTTTTCTGTTCTCTGTCTCTCG------------------GCACGCTTTGAGAAGACGGCAGGATCC-AAAATCCTGTA--GTGGCAgattccaaccagcgtgcacattaggatcatctttggcctcttcacaaaatccagatgctcagaccccacttggacccaatgagttggaacctgcgggtctgcagcctgggcgtGTAAAT-GGGGCTCTGATTTGCTCCTTTGGTTGAGAACCTCCGATATTCGGCCTAGAACTGGGTCAGGCAGTCTCC-AACATGGAGGCATCGTTTTCCCGACATGCCGCTGTGTGGTGCCAGCTTTTGTGACTACTTGGTCACAAT-----TGCTCCTGTGCAG----TTTCTGACGGGACTTAGTGAATGCACAGGCATTTTACGAGCTGTGAGGTAGAAGGAACTGAGCTCCCAGGGGAAGGCG-GAGC------GTGGGAGTGCGTGATGGGATCAGCCCTGTCCCTGGGAC----TGAGCATTTGTTTAGGCTTGATTTCCACCTGGAGAGACAAGTTCTGTTATCAACAATACA-GAGTCAGCACTTCCGCCTTGGGAGGGG-CCCA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76230419 552 + 90941950 aaaagaacttttctgT--TCTGTCTCTCG------------------GCACGCTTTGAGAAGACGGCAGGATCC-AAAATCCTGTA--GTGGCAGATTCCAACCAGCGTGCACATTAGGATCATCTTTGGCCTCTTCACAAAATCCAGATGCTCAGACCCCACTTGGACCCAATGAGTTGGAACCTGCGGGTCTGCAGCCTGGGCGTGTAAAT-GGGGCTCTGATTTGCTCCTTTGGTTGAGAACCTCCGATATTCGGCCTAGAACTGGGTCAGGCAGTCTCC-AACATGGAGGCATCGTTTTCCCGACATGCCGCTGTGTGGTGCCAGCTTTTGTGACTACTTGGTCACAAT-----TGCTCCTGTGCAG----TTTCTGACGGGACTTAGTGAATGCACAGGCATTTTACGAGCTGTGAGGTAGAAGGAACTGAGCTCCCAGGGGAAGGCG-GAGC------GTGGGAGTGCGTGATGGGATCAGCCCTGTCCCTGGGAC----TGAGCATTTGTTTAGGCTTGATTTCCACCTGGAGAGACAAGTTCTGTTATCAACAATACA-GAGTCAGCACTTCCGCCTTGGGAGGGG-CCCA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18501294 554 + 33263144 aaaagaaCTTTTCTGTTCTCTGTCTCTCG------------------GCACGCTTTGAGAAAACGGCAGGATCC-AAAATCCTGTA--GTGGCAgattccaaccagcgtgcacattaggatcatctttggcctcttcacaaaatccagatgctcagaccccacttggacccaatgagttggaacctgcgggtctgcagcctgggcgtGTAAAT-GGGGCTCTGATTCGCTCCTTTGGTTGAGAACCTCCGATATTCGGCCTAGAACTGGGTCAGGCAGTCTCC-AACATGGAGGCATCGTTTTCCCGACATGCCGCTGTGTGGTGCCAGCTTTTGTGACCACTTGGTCACAAC-----TGCTCCTGTGCAG----TTTCTGACGGGACTTAGTGAATGCACAGGCATTTTACGAGCTGCGAGGTAGAAGGAACTGAGCTCCCAGGGGAAGGCG-GAGC------GTGGGAGTGCGTGATGGGATCAGCCCTGTCCCTGGGAC----TGAGCATTTGTTTAGGCTTGATTTCCACCTGGAGAGACAAGTTCTGTTATCAACAATACA-GAGTCAGCACTTCCGCCTTGGGAGGGG-CCCA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198208212 525 + 210400635 tgaaaaGCTCTTCTGTTCTCTGCCTCTTG------------------GCACTCTTTGAGAAGATGGCAAGAAC--AAAATGCTGTA--GTGGTGTATTCCAGCCAGGGTGCACCTTAGGACCAGC-CTGGCCTCTTCCCAAAATCCAGATGTTCAGACCCCACCTGAACGGAA--------------------TGCAGCCTGGGTGTGTAGAT-GGGGTTCCGATTCACTCCTTCA-TTGACAACCTCCAACATATGGTCTAGAACTGGGTCGGGTAGTCTCC-AAAATGGACGCACCATTTTCCTGACACACTGCTGTGTGGTGCCAGCTTTTGCGACCACTTGGTCACAAT-----TGCTCCTGTGCAG----TTTCTGATAGGACTTGGTGAATGCACAGGCATTTTACGA---------------GAACTGTGTTCCCACAGGAAGGTG-GCGCACTCAGACGGGAGTGCACGATTGGATCAGCCCCATGCCTGCGACTGAGTGAGCATTTGTTTCGGTTTGATTTCCACC--GGGAGACAAGTTCTGTTATCAACAATGCA-GAATCAGCACTTTCGCCTCGGGAAGGGCCCCA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40832176 577 - 69331447 AAGCGAGCTTTCTGGTTGGCTGTCTCTCACAAGACCTCTAGATGTCTCCAGGCTTTGAGGACATGGTAGGATCC-CAAATCATTTAGTGTGGAGGTTTCCAGCCAGGGTGCAGGCCAGCACTGCCTT---CCTCCTCACCAAACCCAGAGGCCCAAGCCTCACCCAGGCCCGCTGCATCAGAAGCTCCCAGCATGCAGCCTGGGTGTGTGAACGGGGGCTCCGGTGTGCAGTTCTGGTTGGGAACTTCCAGGCCACAGCTTAGGACTGGATCAAGTAGTTTCCAAAAACTGATGCACCATTTTCTGGACAAGCCCTTGGGTGGTGCTGGGTTTTGATATCACTTGGACAAAACGTTGGTACGACTGTCCTGTGGCTTCTTTATGGGGTTCAGCAGGCGCAAAGGCCAATTATGGACTG------AGAAGGAACATTGCTCCAAGGGGAAGATGTGCTC------ATGTGAATGCGTGACCAGGCTGTCCTCTGTCCTGTGAC----TGGGCATTTGTCTAGGCCTGGTTTCCACCTGGACAGAGAAGTTCTGTTATCAACA-CAAG-GAATCAGTGCTTCAGCCTGGGGAGGGACTCCA i canFam3.chr10 I 3 C 0 a score=40148.000000 s hg38.chr22_KI270876v1_alt 54399 19 + 263666 CAGAATAGCtttttttttt s panTro4.chr22 34432312 19 + 49737984 cagaatagctttttttttt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30845552 19 + 46535552 CAGAATAGCtttttttttt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100400798 19 - 115148730 CAGAATAGCtttttttttt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80548452 19 + 95678458 CAGAATAGCTTATCttttt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80975282 16 - 96509753 CAGAATAGCTTATC---tt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76230971 17 + 90941950 CAGAAtagcttatc--ttt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18501848 19 + 33263144 CAGAATAGCTTATCttttt i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40832753 19 - 69331447 CAAAATACCTGGTCTATTT i canFam3.chr10 C 0 I 25 e calJac3.chr1 198208737 0 + 210400635 C a score=256213.000000 s hg38.chr22_KI270876v1_alt 54418 149 + 263666 tttttttttttttttttttttttttttttttttttttgagacagaatctcactctgccaccca--ggctggagtgcagtgacatg-atctcaactcactgcaacccccgcctcctgggttcaagtgattctcctgcctcagc--cccgagtagc s panTro4.chr22 34432331 128 + 49737984 tttttttttttttttt---------------------gagacagaatctcactctgtcaccca--ggctggagtgcagtggcatg-atctcaactcactgcaacctccgcctcctgggttcaagtgattctcctgcctcagc--cccgagtagc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30845571 123 + 46535552 ttttttttt----------------------------gagacag--tctcactccgtcacccaggggctggagtgcagtggcaca-atctcaactcactgcaacctccgcctcctgggttcaagtgattctccttcctcagcctcctgagtagc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100400817 117 - 115148730 tt-----------------------------------gagacagagtctcactctgtcaccca--ggctggagtgcagtggcatgtatctcagctcacagcaacttccacctcctgggttcaagcgattctcctgcctcagcctcctgagtagc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80548471 125 + 95678458 tttttttttttt-------------------------gagacggagtctcactctgtcaccca--ggctggagtgtagtggcacg-atctcagctca-tgcaacctccgcctcctgggttcaagcaattctcctgccttagcctcctgagtagc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80975298 125 - 96509753 tttttttttttt-------------------------gagacggagtctcactctgtcaccca--ggctggagtgtagtggcacg-atctcagctca-tgcaacctccgcctcctgggttcaagcaattctcctgccttagcctcctgagtagc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76230988 125 + 90941950 tttttttttttt-------------------------gagacggagtctcactctgtcaccca--ggctggagtgtagtggcacg-atctcagctca-tgcaacctccgcctcctgggttccagcaattctcctgccttagcctcctgagtagc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18501867 125 + 33263144 tttttttttttt-------------------------gagacggagtctcactctgtcaccca--ggctggagtgtagtggctcg-atctcagctca-tgcaacctccgcctcctgggttcaagcaattctcctgccttagcctcctgagtagc i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40832772 25 - 69331447 I e calJac3.chr1 198208737 0 + 210400635 C a score=83750.000000 s hg38.chr22_KI270876v1_alt 54567 34 + 263666 tggtgttacaggcgtgcagcatcacgcctggcta s panTro4.chr22 34432459 34 + 49737984 tggtgttacaggcgtgcagcatcacgcctggcta i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30845694 34 + 46535552 tggggttacaggtgcgtggcatcacgcctggcta i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100400934 34 - 115148730 tggggttacaggcgcgtggcatcgtgcccggcta i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80548596 34 + 95678458 tggggttacaggcgcacagcatcatgaccggcta i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80975423 34 - 96509753 tggggttacaggcgcacagcatcatgaccggcta i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76231113 34 + 90941950 tggggttacaggcgcacagcatcatgaccggcta i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18501992 34 + 33263144 tggggttacaggcgcacagcatcatgactggcta i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40832797 33 - 69331447 TGGGGTGACAGGCCAAGAGCA-CACAGCTGGCTA i canFam3.chr10 I 25 I 137 e calJac3.chr1 198208737 0 + 210400635 C a score=325242.000000 s hg38.chr22_KI270876v1_alt 54601 133 + 263666 atttttgtatttttagtagagatggggttttaccatgttgaccaggctggtctcgaactcctgacctcagatgatccacccgcctcggcctcccaaagtgctggggttacaggcatgagccaccgtgcctggc s panTro4.chr22 34432493 133 + 49737984 atttttgtatttttagtagagatggggttttaccatgttgaccaggctggtctcgaactcctgacctcagatgatccacccgcctcggcctcccaaagtgctggggttacaggcatgagccactgtgcctggc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30845728 133 + 46535552 atttttgtatttttagtagaaatggggttttaccatgtggaccaggctggtctcgaactcctgacctcagatgatccacccgcctcggcctcccaaagtgctggggttacaggcatgagccaccgtgcctggc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100400968 133 - 115148730 atttttgtatttttagtagagatggggttttaccatgttgaccaggctggtctcgaactcctgacctcagatgagccacccatctcggcctcccaaagtgctggggttacaggcatgagccaccatgcctggc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80548630 133 + 95678458 atttttgtgtttttagtagagaccgggttccaccatgttgaccaggctggtctcgaactcctgacctcagaggatccacctgcctcggcctcccaaagtgctgtggttacaggcatgagccaccgcgcccagc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80975457 133 - 96509753 atttttgtgtttttagtagagaccgggttccaccatgttgaccaggctggtctcgaactcctgacctcagaggatccacctgcctcggcctcccaaagtgctgtggttacaggcatgagccaccgcgcccggc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76231147 133 + 90941950 atttttgtgtttttagtagagaccgggttccaccatgttgaccaggctggtctcgaactcctgacctcagatgatccacccgcctcggcctcccaaagtgctgtggttacaggcatgagccaccgcgcccagc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18502026 133 + 33263144 atttttgtgtttttagtagagaccgggttccaccatgttgaccaggctggtctcgaactcctgacctcagatgatccacccgcctcggcctcccaaagtgctgtggttacaggcatgagccaccgcgcccggc i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40832830 137 - 69331447 I e calJac3.chr1 198208737 0 + 210400635 C a score=511333.000000 s hg38.chr22_KI270876v1_alt 54734 188 + 263666 cAGAATAGCTTATCTGTCCTGAcatcctacagatggggaagctgtggggcagatgggcagagatttcactgagaccacacagcttcctatggctcagggagaaacagacacttggctgctgctcctggaaatccagttttcttttcaAACAAAC-------------------AAACAAAAAAACTGCATCATTCGTTGCCATC----ACA s panTro4.chr22 34432626 188 + 49737984 cagaatagcttatctgccctgacatcctacagatggggaagctgtggggcagatgggcagagatttcactgagaccacacagcttcctatggctcagggagaaacagacacttggctgctgctcctggaaatccagttttcttttcaAACAAAC-------------------AAACAAAAAAACTGCATCATTCGTTGCCATC----ACA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30845861 188 + 46535552 cAGAATAGCTTATCTGTCCTGAcatcctacagatggggaagctgtggggcagatgggcagagatttgactgagaccacacagctTCCTATGGCTCAGGGAGAAACAGACACTTGGCTGCTGCTCCTTGAAATCCAGTTTTCTTTTCAAACAAAC-------------------AAACAAAAAAACTGCATCACTGGTTGCCATC----ACA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100401101 184 - 115148730 cAGAATAGCTTATCTGTCCTGACATCCTACAGATGGGGAAGCTGTGGGGCAGATGGGCAGAGATTCGACTGAGACCACACAGTTTCCTATGGCTCAGGGAGAA----ACACTTGGCTGCTGCTCCTTGAAATCCAGTTTTCTTTTcaaacaaac-------------------aaacaaacaaacTGCATCATTGGTTGCCATC----GCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80548763 181 + 95678458 cAGAATAGCTGATttgtcctgacatcctacagatggggaagctgtggggcagatgggcagagatttgactgagaccacacagcttactatggctcagggagaaagagaaacttg------gctccttgaaattcagttttcttttcaAACAATC-------------------AAA-AACAAACCTGCATCATTGGTTGCCATC----ACA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80975590 181 - 96509753 cAGAATAGCTGATttgtcctgacatcctacagatggggaagctgtggggcagatgggcagagatttgactgagaccacacagcttactatggctcagggagaaagagaaacttg------gctccttgaaattcagttttcttttcaAACAATC-------------------AAA-AACAAACCTGCATCATTGGTTGCCATC----ACA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76231280 181 + 90941950 cagaatagCTGATTTGTCCTGACATCCTACAGATGGGGAAGCTGTGGGGCAGATGGGCAGAGATTTGACTGAGACCACACAGCTTACTATGGCtcagggagaaagagaaacttg------GCTCCTtgaaattcagttttcttttcaaacaaTC-------------------AAA-AACAAACCTGCATCATTGGTTGCCATC----ACA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18502159 181 + 33263144 cAGAATAGCTGATttgtcctgacatcctacagatggggaagctgtggggcagatgggcagagatttgactgagaccacacagcttgctatggctctgggagaaagagaaacttg------gctccttgaaattcagttttcttttcaAACAATC-------------------AAA-ACCAAACCTGCATCATTGGTTGCCATC----GCA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198208737 210 + 210400635 CGGAATCGCTTATCTGTCCTGAAGTCCtacagatgggaaagctgtggggcagatgggcagggatttgactgagagcacacagcttgctatggctcagggagaagcagaaacttggctgctgctccttgcaatccagttttcttttcaaacccacccgccagGCCCCCCCCCCAAGA-AAAAACACCGAATCATTGGTTGCCATCACAGACA i calJac3.chr1 C 0 C 0 e canFam3.chr10 40832830 137 - 69331447 I a score=1150935.000000 s hg38.chr22_KI270876v1_alt 54922 371 + 263666 GGGGCCACTGGCTACTTGGGAGCATGGAG--AGGAGGCTACTCTCTGAGCATTCCTTGTCCTCAACAGAGGCACAGAAATGGAAGCCTGAGGCCAGGGCCACCTTTTGACTCATCTTAAACTTTTTGTAAATTCATCTTGTGTTTTAAATAAAGTCTCAGAGAACTATGTGCGGTTTCATTCTCAG---ACACTCTGCCTGTGCTTGTCATATTCTTGGCTGTGAGTCTGAATCTGTGTCTC----TTTGTGGAACCG----TCAGTATGGTTTATATGATGGGAGCTCCAGCAGGTGCCTCAGTGaggtattaggaagctggacatgattaatctagtcctttaccctctggaagctcagtctggtggtggggagagacatgt s panTro4.chr22 34432814 370 + 49737984 GGGGCCACTGGCTACTTGGGAGCATGGAG--AGGAGGCTACTCTCTGAGCACTCCTTGTCCTCAACAGAG-CACAGAAATGGAAGCCTGAGGCCAGGGCCACCTTTTGACTCATCTTAAACTTTTTGTAAATTCATCTTGTGTTTTAAATAAAGTCTCAGAGAACTATGTGCGGTTTCATTCTCAG---ACACTCTGCCTGTGCTTGTCGTATTCTTGGCTGTGAGTCTGAATCTGTGTCTC----TTTGTGGAACCA----TCAGTATGGTTTATATGATGGGAGCTCCAGCAGGTGCCTCAGTGaggtattaggaagctggacatgattaatctggtcctttaccctctggaagctcagtctggtggtggggagagacatgt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30846049 379 + 46535552 GGGGCCACTGGCTACTTGGGAGCATGGAG--GGGAGGCTACTCTGTGAGCACTCCTTGTCCTCAACAGAGGCACAGAAATGGAAGCCTGAGGCCAGGGCCACCTTTTGACTCATCTTAAACTTTTTGTAAATTCATCTTGTGTTTTAAATAAAGTCTCAGAGAACTATGTGCAGTTTCATTCTCAG---ACACTCTGCTTGTGCTTGTTGTATTCCTGGCTGTGAGTCCAAATCTGTGTCTCTGAATCTGTGAGTCTGAATCTGTGTATGGTTTATATGATGGGAGCTCCAGCAGGTGCCTCAGTGAGGCGTTAGGAAGCTGGACATGATTAATCTGGTCCTTTACCCTGTGGAAGCTCATTCTGTTGGCGGGGAGAGACATGT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100401285 371 - 115148730 GGGGCCACTGGCCACTTGGGAGCATGGAG--GGGAGGCTACTCTCTGAGCACTCCTTGTCCTCAACAGAGGAACAGAAATGGAAGCCTGAGGCCAGGGCCACCTTTTGACTTATCTTAAACTTTTTGTAAATTCATCTTGTGTTTTAAATAAAGTCTCAGAGAACTATGTGCAGTTTCATTCTCAG---ACACGCTGCCTGTGCTTGTCGTATTCCTGGCTGGGAGTCTGAATCTGTGTCTC----TTCGTGGAACCG----TCAGTATGGTTTATATGACGGGAGCTACAGCAGGTGCCTCAGTGAggcgttaggaagctggatatgattaatctggtcctttaccctctggaagctcagtctggtggtgggaagagacatgt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80548944 369 + 95678458 GGGGCCACTGGCTACTTGGGAGCATGGAG--AGGCAGCTGCTC--TGAGCACTCCTTGTCCTCAACAGAGGCACAGACATGGAAGCCTGAGGCCAGGGCCACCTTTTGATTCATCTTGAACTTTTTGTAAATTCACCTTGTGTTTTAAATAAAGTCTCAGAGAATTATGTGTGATTTCATTCTCAG---ACACTCTGCCTGTGCTTGTCATATTCCTGGCTGTGCATTTAAGTCTGTGTCTC----TTTGTGGAACCG----TCAGTATGGTTTATATGATGGGAGCTCCAGCAGGTGCCTCAGTGaggtgttaggaagctggacatgattaatctggtcctttgccctctggaagctcagtctggtggcagggagagacatgt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80975771 369 - 96509753 GGGGCCACTGGCTACTTGGGAGCATGGAG--AGGCAGCTGCTC--TGAGCACTCCTTGTCCTCAACAGAGGCACAGACATGGAAGCCTGAGGCCAGGGCCACCTTTTGATTCATCTTGAACTTTTTGTAAATTCACCTTGTGTTTTAAATAAAGTCTCAGAGAATTATGTGTGATTTCATTCTCAG---ACACTCTGCCTGTGCTTGTCATATTCCTGGCTGTGCATTTGAGTCTGTGTCTC----TTTGTGGAACCG----TCAGTATGGTTTATATGATGGGAGCTCCAGCAGGTGCCTCAGTGaggtgttaggaagctggacatgattaatctggtcctttgccctctggaagctcagtctggtggcggggagagacatgt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76231461 369 + 90941950 GGGGCCACTGGCTACTTGGGAGCATGGAG--AGGCAGCTGCTC--TGAGCACTCCTTGTCCTTAACAGAGGCACAGACATGGAAGCCTGAGGCCAGGGCCACCTTTTGATTCATCTTGAACTTTTTGTAAATTCACcttgtgttttaaataaagtCTCAGAGAATTATGTGTGGTTTCATTCTTAG---ACACTCTGCCTGTGCTTGTCATATTCTTGGCTGTGCATTTGAGTCTGTGTCTC----TTTGTGGAACCG----TCAGTATGGTTTATATGATGGCAGCTCCAGCAGGTGCCTCAGTGAGGTGTTAGGAAGCTGGACATGATTAATCTGGTCCTTTGCCCTCTGGAAGCTCAGTCTGGTGGCGGGGAGAGACATGT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18502340 369 + 33263144 GGGGCCACTGGCTACTGGGGAGCATGGAG--AGGCAGCTCCTC--TGAGCACTCCTTGTCCTCAACAGAGGCACAGACATGGAAGCCTGAGGCCAGGGCTACCTTTTGACTCATCTTGAACTTTTTGTAAATTCACCTTGTGTTTTAAATAAAGTCTCAGAGAATTATGTGTGGTTTCATTCTCAG---ACACTCTGCCTGTGCTTGTCATATTCCTGGCTGTGCATTTGAGTCTGTGTCTC----TTTGTGGAACCG----TCAGTATGGTTTATATGATGGGAGCTCCAGcaggtgcctcagtgaggtgttaggaagctggacatgattaatctggtcctttgccctctggaagctcagtctggtggcggggagagacatgt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198208947 370 + 210400635 GGGGCCACTGGCTGCTTGGGAGCATGGAG--GGGAGGCTACTT--TGAACACTCCTCGTCCTCTACAGAGGCACAGGAACGGAA--CTGAGGCCAGGGCCATCTTTTGACTCATCTGAACATTTTTGTAAATTCATCCTGTGTTTTGAATAAAGTCTCGGGGGACTATGTGTGGTTCCATTCTCAGAGCACACTCTGCTTGTGCTTATCACATCCCTGGCTGTGCGTTTGAATCTGTGCCTC----TTTGTGGAACTA----TCAGTATGGTTTATATGATGGGAGCTCTAGCAGTTGCCTCAGTGAGGCGTTGGGAAGCCGGAAACGATTAATCTGGACCTTTGCCCTCTGGAAACTCAGTCTGGTGGCGCGAAAAGACATGT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40832967 277 - 69331447 GGGGGCACAG---AAATGGGAGCCTGAGGCTGGGAGCCAGCTCTCTGA----CCCTTGTCTTAAAC--------------------------------------------TCACCT----------------------TGTGTTACACATAAAATCTTTGGGGAAT-----CAGTTT--------G---ATCCTGTGCCTATCCCTGTCACGTCCCTGGCTGCGTGTGCCAGACTGT--CTT----TCTGTGGCACCT----TCCGCATAGTTCATAGGATGGG------AACAAGTGCC-CAGCATGGTGATAGGAAACCAGACATGAGGAATCTGGTTCTCTGCCTCCTGGATGCTTGGTCTGGTGG-GAGAAAAGACATGT i canFam3.chr10 I 137 C 0 a score=844969.000000 s hg38.chr22_KI270876v1_alt 55293 340 + 263666 aC-TAATTACCTAAGAGAAAATCCAGTTTCTCCAGGCTTTGTTTCCAAATGGCACCAATATATGGCTGCACGTCACCAATCAATGTTCATGTGATGGACGGAGGCTGCGGACTGGGGCT-AAGCTTGAGTCAGAGAAAA--GCATCATTGCTAAAGCCTGTCAAAACAGGAAGAATTATGTAAGTGGAAGGGGTTTGAGCC-------------------------------AAAAACAAATCAAATGTATAAAGCATCTACTATGTGCTAGACAA--AGATGACTTGTCTTTGGATGCTGTCTGTCTAGTTGGTCCAGAGGTCAGCACCTCTCACTGTCTG---ATAAAAGGTCAGCCAGCCACATGCTACACCTGAGG s panTro4.chr22 34433184 340 + 49737984 aC-TAATTACCTAAGAGAAAATCCAGTTTCTCCAGGCTTTGTTTCCAAATGGCACCAATATATGGCTGCACGTCACCAGTCAGTGTTCATGTGATGAACGGAGGCTGCGGACTGGGGCT-AAGCTTGAGTCAGAGAAAA--GCATCATTGCTAAAGCCTGTCAAAACAGGAAGAATTATGTAAGTGGAAGGGGTTTGAGCC-------------------------------AAAAACAAAGCAAATGTATAAAGCATCTACTATGTGCTAGACAA--AGATGACTTGTCTTTGGATGCTGTCCGTCTAGTTGGTCCAGAGGTCAGCACCTCTCACTGTCTG---ATAAAAGGTCAGCCAGCCAGACGCTACACCTGAGG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30846428 341 + 46535552 AC-TAATTACCTAAGAGAAAATCCAGTTTCTCCAGGCTTTGTTTCCAAATGGCACCAATATACGGCTGCACGTCACCAATCAATGTTCATGTGATGAACGAAGGCTGTGGACTGGGGCT-AAGCTTGAGTCAGAGAAAA--GTATCATTGCTAAAGCCTGTCAAAACAGGAAGAATTATTTAAGTGGAAGGGGTTAGAGCC------------------------------AAAAAAAAAATCAAATGTATAATGCATCTACTATGTGCCAGACAA--AGATGACTTGTTTTTGGATGCTGTCCATCTAGTTGGTCCAGAGGTCAGCACCTCTCACTGCCTG---ATAAAAGGTCAGCCAGCCACATGCTACACCTGAGG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100401656 338 - 115148730 aC-TAATTACCTAAGAGAAAATCCAGTTTCTCCAGGCTTTGTTTCCAAATGGCACCAATATATGGCTGCACGTCACCAGTCAATGTTCATGTGATGAATGGAGGCTGCGGACTGGGGCT-AAGCTTGAGTCAGAGAAAA--GCATCATTGCTAAAGCCTGTCAAAACAGGAAGAATTATGTAAGCGGAAGGGGTTTGAGCC-------------------------------AAAA--AAATTAAATGTATAAAGCATCTACTACGTGCTAGACAA--AGATGACTTGTCTTTGGATGCTGTCTGTCTAGCTGGTCCAGAGGTCAGCACCTCTCACTGCCTG---ATAAAAGGTCAGCCAGCCACATGCTACACCTGAGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80549313 345 + 95678458 acagaattacCTAAGAGAAAATCCAGTTTCTCCAGGCTTTGTTTCCAAATGGCACCAATATATGGCTGCACGTCACCAATCAATGTTCATGTGATGAATGGAGGCTGCGGACTGGGGCT-GAGCTTGAGTCAGAGAAAAACACATCATTGCTAAAGCCTGTCAAAACAGGAAGAATTATGTAAGTGGAAGGGGTTTGAGCC-------------------aaaaaaaaaaaaaaaaaaaaaTCAAATGTATAAAGCATCTACTACGTGCTAGACAA--AGATGACTTATCTTTGGATGCTGTCCATCTAGTTGGTCCAGAGG----------TCATTGCCTG---ATAAAAGGTCAGACAGCCACGTGCTACACCTGAGG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80976140 348 - 96509753 acagaattacCTAAGAGAAAATCCAGTTTCTCCAGGCTTTGTTTCCAAATGGCACCAATATATGGCTGCACGTCACCAATCAATGTTCATGTGATGAATGGAGGCTGCGGACTGGGGCT-GAGCTTGAGTCAGAGAAAAACACATCATTGCTAAAGCCTGTCAAAACAGGAAGAATTATGTAAGTGGAAGGGGTTTGAGCC----------------aaaaaaaaaaaaaaaaaaaaaaaatcaaatatataaaGCATCTACTACGTGCTAGACAA--AGATGACTTATCTTTGGACGCTGTCCATCTAGTTGGTCCAGAGG----------TCATTGCCTG---ATAAAAGGTCAGACAGCCACGTGCTACACCTGAGG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76231830 347 + 90941950 ACAGAATTACCTAAGAGAAAATCCAGTTTCTCCAGGCTTTGTTTCCAAATGGCACCAATATATGGCTGCACGTCACCAATCAATGTTCATGTGATGAATGGAGGCTGCGGACTGGGGCT-GAGCTTGAGTCAGAGAAAAACACATCATTGTTAAAGCCTGTCAAAACAGGAAGAATTATGTAAGTGGAAGGGgtttgaggc-----------------aaaaaaaaaaaaaaaaaaaaaaatcaaatgtataaaGCATCTACTACGTGCTAGACAA--AGATGACTTATCTTTGGATGCTGTCCGTCTAGTTGGTCCAGAGG----------TCACTGCCTG---ATAAAAGGTCAGACAGCCACGTGCTACACCTGAGG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18502709 364 + 33263144 acagaattacCTAAGAGAAAATCCAGTTTCTCCAGGCTTTGTTTCCAAATGGCACCAATATATGGCTGCACGTCACCAATCAATGTTCATATGATGAATGGAGGCTGCGGACTGGGGCT-GAGCTTGAGTCAGAGAAAAACACATCATTGCTAAAGCCTGTCAAAACAGGAAGAATTATGTAAGTAGAAGGGGTTTGAGCCaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaTCAAATGTATAAAGCATCTACTACGTGCTAGACAA--AGATGACTTATCTTTGGATGCTGTCCCTCTAGTTGGTCCAGAGG----------TCACTGCCTG---ATAAAAGGTCAGACAGCCACGTGCTACATCTGCGG i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40833244 305 - 69331447 GTACAATTTCCCAACAGAAAATCCAGCCTCTCCAGTTCCTGTTTCCAAATGGCACCAAAATACG-------------------------CGTGACTAAGGGTCGCTGCAGACCTAGGCTGGAGCTTAGATGAAAGAAAA--GCTTCATAGTTAAAGTCTGT-GGAGCAGAAAGAATGATGTGAGGGGAGGG---TCAAGCC---------------------------------AACAAAATGAAATGTGTAAAGAGCACACTGTGTGCT-GATGGCCAGCTGGCTGTCTTTGGGATGCTG-CCGTCTAGT---TCCGGGTG--AGCAGGACTC---GCCTGGACAGCAGAGGCCAGG-AGGCAAGTGCTCTGCCTGAGG i canFam3.chr10 C 0 I 2659 e calJac3.chr1 198209317 0 + 210400635 C a score=3201028.000000 s hg38.chr22_KI270876v1_alt 55633 1370 + 263666 ACTATGGGTGGAGATCAAGGATTCAGCTCGACTTGCTGACTGTTTGCAAGTGGAGAGAGGTCCTCACTAAGGACCGGCAGCCACCCAAGACGAAAGTAGGAACACACCCCCCTTTAGCAAAATATCTTTCTTTACATCATTTT-TCTCTTTCCTCCTTAGGGTTTTAAGATGGTTATTGCCAATTGTTGTCCAACTTATTGACCTAGGGAACtgcttggtgtgatttttttctgtctcccccacatccaatccctatgttgatatcggaacccccagtgtgatggtgttaggagatggggccttttgggaggtgattagatcatcagggtggcgccctcatgaatgggattagtgcccttataagaggccccacagagctagctagcctcttccaccattggatgaatagtgagaaggagctctaagccaggaaatgggcccacaccagccatagaatctgctggagccttgaccttggatttcccagcctctggaactgtgagaaataaacttatgttatttta---aaattttttttgagat-ggagtttcgctcttgttgcccaggctggagtgcaatggcccaatctcggctcactgcaacctctgcctctcaggttcaagcgattcttctgcctcagcctcccaagtagctgggattacaggcgcccgccaccatgcccagctaatttttgtatttttagtagaaacagggtttcactatgttggccaggctggtcttgaactcctgacctcaggagatccacccccacctcacctcccaaagtgctgggattacaggcgtgagccactgcgtctggccagcttctgttatttaaaaattactcagtttatggtattttgttatcagctcaaatggact--agacaggaacataggttttgagtagaaaaagggtttatttcaagcatattgaattttagaagcctgtggggctgcagctggacgtgagtctagactctaggaaagctttatgaactccagtttggatttaagagtcattagcttacaggcagaaatgggtctcaacagtgatcttttcagtggagtatgggaagaagttggcctacaactgagccctagaggaataacaagatttaaaagagagctggaggaagaggagcctacaagaggcagagaggcagccagagacaggagTGCAGTGCTGGCTCTGATTTCTGTGGGGTTTCCACAAGAGCAGCACTTAGAAACACtagcagtcagag----gttaaaggcatacacttgggagcaactgcctgggtttggatcctggttctgcaacttcctac-ttatgtgactttgagaaagttagttaatctctctatgcgtccagcttcatcttttaacagaggaata s panTro4.chr22 34433524 1368 + 49737984 ACTATGGGTGGAGACCAAGGAATCAGCTCGACTTGCTGACTGTTTGCAAGTGGAGAGAGGTCCTCACTAAGGACCGGCAGCCACCCAAGACGAAAGTAGGAACGCACCCTCCTTTAGCAAAATATTTTTCTTCACATCATTTT-TCTCTTTCCTCCTTAGGGTTTTAAGATGGTTATTGCCAATTGTTGTCCAACTTATTGACCTAGGGAACtgcttggtgtgatttttttctgtctcccccacatccaatccctgtggtgatatcggaacccccagtgtgatggtgttaggagatggggcctttcaggaggtgattagatcatcagggtggcgccctcatgaatgggattagtgccctgataagaggccccacagagctagctagcctcttccaccatttgatgaatagtgagaaggagctctaaaccaggaaatgggcccacaccagccatagaatctgctggagccttgaccttggatttcccagcctctggaactgtgagaaataaacttatgttatttaa---aaaaattttttgagat-ggagtttcactcttgttgcccaagctggagtgcaatggcccaatctcggctcactgcaacctctgcctctcaggttcaagtgattcttctgcctcagcctcccgagtagctgagattacaggcgcccgccaccatgcccagctaatttttgtatttttcgtagagacagggttttactatgttggccaggctggtcttgaactcctgacctcaggagatccacccc--cctcacctcccaaagtgctgggattacaggcatgagcaactgcgtctggccaacttctgttatttaaaaattactcagtttatggtattttgtgatcagctcaaagggact--agacaggaacataggttttgagtagaaaaagggtttatttcaagcatattgaattttagaagcctgtggggctgcagctggacgtgagtctagactctaggaaagctttatgaactccagtttggatttaagagtcattagcttacaggcagaaatgggtctcaacagtgatcttttcagtggagtatgggaagaaggtggcctacaactgagccctagaggaataacaagatttaaaagagagctggaggaagaggagcctacaagaggcagagaggcagccagagacaggagTGCAGTGCTGGCTCTGATTTCTGTGGGGTTTCCACAAGAGCAGCACTTAGAAACACtagcagtcagag----gttaaaggcatacacttgggagcaactgcctgggtttggatcctggttctgcaacttcctac-ttatgtgactttgggaaagttatttaatctctctatgcatccagcttcatcttttaacagaggaata i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30846769 1365 + 46535552 ACTACAGGTGGAGACCAAGGAATCAGCTCGACTTGCTGACTGTTTGCAAGTGGAGAGAAGTCCTCACTGAGGACCAGCAGCCACCCAAGAC-AAAGTAGGAACACACCCCCCTTTAGCAAAATATTTTTCTTTACATCGTTT----TCTTTCCTCCTTAGGGTTTTAACGTGGTTATTGCCAACTGTTATCCAACTTATTGACCTAGGGAACtgcttggtgtgatttttttt--tctcccccacatccaattcctatgttgatatcataacccccaatgtgacggtgttaggagatggggcctttcaggaggtgattagatcatcagggtggcgccctcatgaatgggattagtgcccttataagaggccccacagagctagctagcctcttccaccatttgatgaatagtgagaaggagctctaaaccaggaaatgggcccgcaccagccatagaatctgctggagccttgaccttgcactacccagcctctggaactgtgagaaataagcttatgttatttta---aaattttttttgagac-ggagttttgctcttgttgcccaggctggagtgcaatggcccaatcttggctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcgcccaccaccatgcccagctaatttttgtatttttagtagagacagggtttcactgtgttggccaggctggtctcgaactcctgacctcaggagatccacccc-acttggcctcccaaagtgctgggattacaggcgtgagccgctgcgcccggccaacttctgttatttaaaaattactcagtttatggtattttgttatcagctcaaatggactagagacaGGAACATAGGTTTTGAGTAGAAAGAGGGTTTATTTCAAGCACATTGAATTTTAGAAGCCTGTGGGGCTGCAGCTGGATGTGAGTCTAGACTCTAGGAAAGCTTTATGAACTCCAGTTTGGATTTAAGAGTCATTAGCTTACAGGCAGAAATGGGTCTCAACAGTGATCTCTTCAGTGGAGTATGGGAAGAAGGTGGCCTACAACTGAGCCCTAGAGGAATAACAAGATTTAAAAGAGAGCTGGAGGAAGAGGAGCCTACAAGAGGCAGACAGGCAGCCGGAGACATGAGTGCAGTGCTGGCTCTGATTTCTGTGGGGTTTCTGCAAGAGCAGCACTTAGAAACACtagcagtcagag----gttaaacgcatagacttgggagtaactgcctgggtttggatcctggttctgcaacttcctac-ttatgtgactttgggaaagttatttaatctctctatgcttccagcttcatcttttaacagaggaata i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100401994 1374 - 115148730 ACTACGGGTGGAGACCAAGGAATCAGCTCGACTTGCTGACTGTTTGCAAGCGGAGAGAAGTCCTCACTGAGGACCGGCAGCCACCCAAGACGAAAGTAGGAACACACCCCCCTTTAGCAAAATATTTTTCTTTACATCATTT--TCTCTTTCTTCCTTAGGGTTTTAACATGGTTATTGCCAACTGTTGTCCAACTTATTGACCTAGGGAACtgcttggtgtgatttttttg--tctcccccacatccgattcctatgttgataccgtaacccccaatgtgatagtgttaggagatggggcctttcaggaggtgattagatcatcagggtggtgccctcatgaatgggattagtgcccttataagaggccccacagagctagctagcctcttccaccattggatgaatagtgagaaggagctctaaaccaggaaaggggcccgcaccagtcatagaatctgctggagccttgaccttggacttcccagcctctggaactgtgagaaataaacttatgttattttt---aaattttttttgagatgggagttttgctcttgttgcccaggctggagtgcaatggcccaatcaccactcgctgcaacctctgcctcccaggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggtgcctgccatcatgcccagctaatttttgtatttttagtagagacagggtttcactatgttggcccggctggtctggaactcctgacatcaggagatccacccccccttggcctcccaaagtgctgggattacaggcgtgagccactgcgcccagccaacttctgttatttaaaaattcctccgtttatggtattttgttatcagctcaaatgcactagagacaGGAGCATAGGTTTTGAATAGAAAGAGGGTTTATTTCAAGCACATTGAATTTTAGAAGCCTGTGGGGCTGCAGCTGGATGTGAGTCTAGACTCTAGGAAAGCTTTATGAACTCCAGTTTGGATTTAAGAGTCATTAGCTTACAGGCAGAAATTGGTCTCAACGGTGATCTTTTCAGTGGAGTATGGGAAGAAGGTGGCCTACAACTGAGCCCTAGAGGAATAACACGATTTAAAAGAGAGCTGGAGGAAGAGGAGCCTAGAAGAGGCAGAGAGGCAGCCAGAGACGTGAGTGCAGTGCTGGCTCTGATTTCTGTGGGGTTTCTGCGAGAGCAGTACTTAGAAACACTAGCAGTCAGAGGTtagttaagggcatagacttgggagcaactgcctgggtttggatcctggttctgcaacttcctac-ttatgtgactttgggaaagttatttaatctctctatgcttccagcttcatcttttaacagaggaata i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80549658 1353 + 95678458 ACTATGGGTGGAGACCAAGGAATCAGCTCAACTTGCTGACTGTTTGCAAGTGGAGAGAGGTCCTCACTGAGGACCGGCGGCCACCCAAGATGAAAGTAGAAACACACCCACCTTTAGCAAACTATTTTTCTTTACATCATTTTCTCTCTTTCCTCCTTAGGGTTTTGACATGGTGATTGCCAATTGTTGTCCAACTT-------------ACtgcttggtgtgattg-------tctcccccacatcccattcctatgttgatatcgtaacccccagtgtgatggtgttagg-gatggggcctttcaggaggtgatgagatcattaggatggtgccctcatgaatgggattagtgcccttatcagaggccccacagaactcgctagcttcttccaccatttgaagaatagtgagaaggagctctaaaccaggaaatgggcccacaccagccatagaatctgctggagccttgaccctggacttcccagcatctggaactgtgagaaataaacttctgtaattttcttttttttttttttgagat-ggagtttcactcttgttgctcaggctggagtgcaatggcccaatctcggctcactgcaacccctgcctgccaggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggcatgcgccaccatgcccagctaatttttgtatttttagtagagttggggtttcactatgttggccaggctggtctcaaactcctgacctcaggagatccacccc-cttcggcctctcaaagtgctgggattacaggcgtgagccacagagcctggtcaacttctgttatttaaaaattact--gtttatggtattttgttatcagctcaaagggactagagacaggaacataggttttgagtagaaaaagggtttatttcaagcacattgaattttaggagcctatggggctgcagctggatgttagtctagactctaggaaagctctatgaactccagtttggatttaagagtcattagcttacaggcagacattggtctcaacagtgatcttttcagtggagtatgggaagaaggtggcctacagctgagccctagaggaataacaaggtttaaaagagagctggaggaagaggagcctacaagaggcagagaggcagccagagataggagTGCAGTGCTGGCTCTGATTTCTGTGGGGTTTCTACAAGAGCAGCACTTAGAAACACtagcagtcagag----gttaaaggcacagacttgggagcaactgcctgggtttgcatcctggttctgccacttcctactttatgtgactttggcaaagttatttaatctctctatgcttccagcttcatcttttaacagaggaata i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80976488 1353 - 96509753 ACTATGGGTGGAGACCAAGGAATCAGCTCGACTTGCTGACTGTTTGCAAGTGGAGAGAGGTCCTCACTGAGGACCGGCGGCCACCCAAGATGAAAGTAGAAACACACCCACCTTTAGCAAACTATTTTTCTTTACATCATTTTCTCTCTTTCCTCCTTAGGGTTTTGACATGGTGATTGCCAATTGTTGTCCAACTT-------------ACtgcttggtgtgattg-------tctcccccacatcccattcctatgttgatatcgtaacccccagtgtgatggtgttaggagatggggcctttcaggaggtgatgagatcattaggatggtgccctcatgaatgggattagtgcccttatcagaggccccacagaactcgctagcttcttccaccatttgaagaatagtgagaaggagctctaaaccaggaaatgggcccacaccagccatagaatctgctggagccttgaccctggacttcccagcatctggaactgtgagaaataaacttctgtaattttc-tttttttttttttgagat-ggagtttcactcttgttgctcaggctggagtgcaatggcccaatctcggctcactgcaacccctgcctgccaggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggcatgcgccaccatgcccagctaatttttgtatttttagtagagtcggggtttcactatgttggccaggctggtctcaaactcctgacctcaggagatccacccc-cttcggcctctcaaagtgctgggattacaggcgtgagccacagagcctggtcaacttctgttatttaaaaattact--gtttatggtattttgttatcagctcaaagggactagagacaGGAACATAGGTTTTGAGTAGAAAAAGGGTTTATTTCAAGCACATTGAATTTTAGGAGCCTATGGGTCTGCAGCTGGATGTTAGTCTAGACTCTAGGAAAGCTCTATGAACTCCAGTTTGGATTTAAGAGTCATTAGCTTACAGGCAGACATTGGTCTCAACAGTGATCTTTTCAGTGGAGTATGGGAAGAAGGTGGCCTACAGCTGAGCCCTAGAGGAATAACAAGGTTTAAAAGAGAGCTGGAGGAAGAGGAGCCTACAAGAGGCAGAGAGGCAGCCAGAGATAGGAGTGCAGTGCTGGCTCTGATTTCTGTGGGGTTTCTACAAGAGCAGCACTTAGAAACACtagcagtcagag----gttaaaggcacagacttgggagcaactgcctgggtttgcatcctggttctgccatttcctactttatgtgactttggcaaagttatttaatctctctatgcttccagcttcatcttttaacagaggaata i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76232177 1351 + 90941950 ACTATGGGTGGAGACCAAGGAATCAGCTCGAGTTGCTGACTGTTTGCAAGTGGAGAGAGGTCCTCACTGAGGACCGGCGGCCACCCAAGATGAAAGTAGAAACACACCCACCTTTAGCaaactatttttctttacatcattttctctctttcctccttagGGTTTTGACATGGTGATTGCCAGTTGTTGTCCAACTT-------------ACTGCTTGGTGTGATTG-------TCTCCCCCACATCCCATTCCTATGTTGATATCgtaacccccagtgtgatggtgttaggagatggggcctttcaGGAGGTGATGAGATCATTAGGATggtgccctcatgaatgggattagtgcccttatcagAGGCCCCACAGAACTCGCTAGCTTCTTCCACCATTTGAAGAATAGTGAGAAGGAGCTCTAAACCAGGAAATGGGCCCACACCAGCCATAGAATCTGCTGGAGCCTTGACCCTGGACTTCCCAgcatctggaactgtgagaaataaacttctgtaattttc--ttttttttttctgagat-ggagtttcactcttgttgctcaggctggagtgcaatggcccaatctcggctcactgcaacccctgcctgccaggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggcatgcgccaccatgcccagctaatttttgtatttttagtagagtcggggtttcactatgttggccaggctggtctcaaactcctgacctcaggagatccacccc-cttcggcctctcaaagtgctgggattacaggcgggagccacagagcctggtcaacttctgttatttaaaaattact--gtttatggtattttgttatcaGCTCAAAGGGACTAGAGACAGGAACATAGGTTTTGAGTAGAAAGAGGGTTTATTTCAAGCACATTGAATTTTAGGAGCCTATGGGGCTGCAGCTGGATGTTAGTCTAGACTCTAGGAAAGCTCTATGAACTCCAGTTTGGATTTAAGAGTCATTAGCTTACAGGCAGACATTGGTCTCAACAGTGATCTTTTCAGTGGAGTATGGGAAGAAGGTGGCCTACAACTGAGCCCTAGAGGAATAACAAGGTTTAAAAGAGAGCTGGAGGAAGAGGAGCCTACAAGAGGCAGAGAGGCAGCCAGAGATAGGAGTGCAGTGCTGGCTCTGATTTCTGTGGGGTTTCTACAAGAGCAGCACTTAGAAACACTAGCACTCAGAG----GTTAAAGGCACGGACTTGGGAGCAACTGCCTGGGTTTgcatcctggttctgccacttcctAC-TTATGTGACTTTGgcaaagttatttaatctctgtatgcttccagcttcatcttttAACAGAGGAATA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18503073 1363 + 33263144 ACTATGGGTGGAGACCAAGGAATCAGCTCGACTTGCTGACTGTTTGCAAGTGGAGAGAGGTCCTCACTGAGGACCAGTGGCCACCCAACATGAAAGTAGAAACACACCTACCTTTAGCAAACTATTTTTCTTTACATCATTTTCTCTCTTTCCTCCTTAGGGTTTTGACATGGTGATTGCCAATTGTTGTCCAGCTTACTgaccgagggaactgcttggtgtgattg-------tctcccccacatcccattcctatgttgatatcgtaacccccagtgtgatggtgttaggagatggggcctttcaggaggtgatgagatcattaggatggtgccctcatgaatgggattagtgcccttaccagaggccccacagaactcgctagcttcttccaccatttgaagaatagtgagaaggagctctaaaccaggaaatgggcccacaccagccatagaatctgctggagccttgaccctggacttcccagcatctggaactgagagaaataaacttctgtaattttc-tttttttttttttgagat-ggagtttcactcttgttgctcaggctggagtgcaatggcccaatcttggctcactgcaacccctgcctgccaggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggcatgcgccaccatgcccagctaatttttgtatttttagtagacacggggtttcactatgttggccaggctggtctcaaactcctgacctcaggagatccacccc-cctcggcctctcaaagtgctgggattacaggcgtgagccacagagcctggtcaacttctgttatttaaaaattact--gtttatggtattttgttatcagctcaaagggactagagacaggaacataggttttgagtagaaagagggtttatttcaagcacattgaattttaggagcctatggggctgcagctggatgttagtctagactctaggaaagctctatgaactccagtttggatttaagagtcattagcttacaggcagacatcggtctcaacagtgatcttttcagtggagtatgggaagaaggtggcctacaactgagccctagaggaataacaaggtttaaaagagagctggaggaagaggagcctgcaagaggcagagaggccgccagagataggagTGCAGTGCTGGCTCTGATTTCTGTGGGGTTTCTACAAGAGCAGCACTTACAAACACtagcagtcagag----gttaaaggcacagactcgggagcaactgcctgggtttgcatcctggttctgcagcttcctac-ttatgtgactttggcaaagttatttaatctctctatgcttccagcttcatcttttaac--aggaata i chlSab2.chr19 C 0 C 0 e canFam3.chr10 40833549 2659 - 69331447 I e calJac3.chr1 198209317 0 + 210400635 C a score=2065893.000000 s hg38.chr22_KI270876v1_alt 57003 728 + 263666 acaataCtgtcaggtataggctttgatttctccttccttagaagctgatgcattagcctgttattgtttcacggatattggtggaagacacacgactcggtgagaggcaaaggactttattactcacagtgcagcaggcagcatgagcaccagcatatggaacagttccatgagcccccgagtcccacaggcctggatagatgtggcgcaggtagtaggtttgcgctgcagctgaggagcactgagcttaggggatccacctcttttataacaggtagtaagcaagcttgctgtttgtcct-gaggggatacaagttttcttgctgcaaacacaacccccagaaatggcctggggaaggggcaatccaggttttgcatgcttgtcaaacccagcaggaag------gcaggagCAGGAGC---TGCAGACAGAAGTGCCTCAGGGGGCACCCGCCTCACAGAGCTGCTGGGAAGATGAAAGGAGTGAAAATGGGCAAGTGCCACCAACAGCGCTCCACACACATGTCCACTGTTGTTACTAGGGGTGGCAATGTGGAGGAAGGCAGGGCTGAAAAGTGCATCATTTACATCCAAAATGGAAAGcagtaattcaacaaataggtactgaatgcttacaatgcaccaggcaaatggagatacagcagccaacagaacaaagtctttgacctccaggtgcctgcattttagtacagaaagacagacaccaaataaactacc s panTro4.chr22 34434892 728 + 49737984 acaataCtgtcaggtataggctttgatttctccttccttagaagctgatgcattagcctgttattgcttcacggatattggtggaagacacacgactcggtgagaggcaaaggactttattactcacagtgcagcaggcagcatgagcaccagcatatggaacagttccatgagcccccgagtcccacaggcctggatagatgtggcgcaggtagtaggtttgcactgcagctgaggagcactgagcttaggggatccacctcttttataacaggtagtaagcaagcttgctctttgtcct-gaggggatacaagttttcttgctgcaaacacaacccccagaaatggcctggggaaggggcaatccaggctttgcatgcttgtcaaacccagcaggaag------gcaggagCAGGAGC---TGCAGACAGAAGTGCCTCAGGGGGCACCCGCCTCACAGAGCTGCTGGGAAGATGAAAGGAGTGAAAATGGGCAAGTGCCACCAACAGCGCTCCACACACATGTCCACTGTTGTTACTAGGGGTGGCAATGTGGAGGAAGGCAGGGCTGAAAACTGCATCATTTACATCCAAAATGGAAAGcagtaattcaacaaataggtactgaatgcttacaatgcaccaggcaaatggagatacagcagccaacagaacaaagtctttgacctccaggtgcctgcattttagtacagaaagacagacaccaaataaaCtacc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30848134 728 + 46535552 acaataCtgtcaagtatgggctttgatttctccctccttagaagctgatgcattagcctgttattgtttcatggatattggtggaagacacaaggctcggtgagaggcaaaggactttattactcacagtgcagcaggcagcatgagcatcagcatatggaacagttccatgagcccccgagtcccacaggcctggatagatgtagtacaggtagtaggtttgcactgcagctgaggagcactgagcttagcggatccatgtcttttataacaggtagtaagcaagcttgctctttgtcct-gagcagatacaagtttccttgctgcaaacacaacccccagaaatggcctggggaaggggcaatccaggctttgcatgcttgtcaaacccagcaggaag------gcaggagcaggagc---tgcagagagaagtgcctcAGGGAGCACCCGCCTCACAGAGCTGCTGGGAAGATGAAAGGAGTGAAAATGGGCAAGTGCCACCAACAGCGCTCCGCACACACGTCCACTGTTTTTACTAGGGGTGGCAATGTGGAGGAAGGCAGGGCTGAAAACTGCATCATTTACATCCAAAATGGAAAGCAGCAattcaacaactacgtactgaatgcttacaatgcaccgggcaaatggagatacagcagccaacagaacaaagtctttgacctccaggtgcctgcattttagtacagaaagacagacaccaaataaaCTacc i ponAbe2.chr22 C 0 I 2622 s nomLeu3.chr7b 100403368 720 - 115148730 acaataCtgtcaggtatgggctttgatttctccctccttagaagctgatgcattagcctgttattgtttcatggatattggtggaagacacaagactcggtgaaaggcaaaggactttattactcacagtgcggcaggcagcatgagcagcagcacatggaacagttccatgagcccccgagtcccacaggcctggatagatgtagtgcaggtagtaggtttgcactgcagctgaggagcactgagcttaggggatccacctcttttataacaggtagtaagcaagcttgctc-ttaccct-gaggggatacaagtttccttgctgcaaacacaacccccagaaacggcctggggaaagggcaatccaggctttgcatgcttgtcaaacccagcaagaag------gcagga----AAGT---TGCAGAGAGAAGTGCCTCAGGGGGCACCCGCCTCACAGAGCTGCTGGGAAGACGAAAGGAGTGAAAATGGGCAAGTGCCACCAACAGCACTCCGCACACTTGTCCACTGTTGTTACTAGGGGTGGCAATGTGGAGGAAGGCAGGGCTGAAAACTGCATCATTTACATCCAAAATGGAAAGCAGTAattcaacaaataggtactgaatgcttacaaagcaccaggcaaatggat---cagcagccaacagaacaaagtctttgacctccaggtgcctgcattttagtacagaaagacagacaccaaataaaCtacc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80551011 701 + 95678458 acaataCtgtcaggtatgggctttgatttctcccgccttagaagctgatgcattcgcctgttacagtttcatggatattggtggaagacacaagactcggcgagaggcaaaggactttattcctcacggtgcagcaggcag---------------------------catgagcccccgagtcccacaggcctggatagatgtggtgcaggcagtaggtttgcactg-agctgaggggcactgagcttagaggatccacctgttttataacaggtagtaagcaagcttgctctttgtcct-gaggggatacaagtttccttgttgcaaacacaacccccagaaagggcctggggaaggggcaatccaggctttgcatgcttgtcaaacccagcaggaag------gcaggagcaggagcaggagcagagagaagtgcctc-GGGGgcacccgcctcacagagctgctgggaagatgaaaggagtgaaaatgggcaagtgccaccaacagtgctccgcacacaTGTCCACTGTTGTTACTAGGCGTGGCAATGTGGAGGAAGGCAGGGCTGAAAACTGCATCACTTACATCCCAAATGGAAAAcagtaattcaacaaatatgtactgaatactttcaacgcaccaggc-aatggcgatacagcagccaacagaacaaagtctttgacctccaggtgcttacgttttagtacagacagacagacaccaaataaaCtacc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80977841 701 - 96509753 acaataCtgtcaggtatgggctttgatttctcccgccttagaagctgatgcattcgcctgttacagtttcatggatattggtggaagacacaagactcggcgagaggcaaaggactttattcctcacggtgcagcaggcag---------------------------catgagcccccgagtcccacaggcctggatagatgtggtgcaggcagtaggtttgcactg-agctgagaggcactgagcttagaggatccacctgttttataacaggtagtaagcaagcttgctctttgtcct-gaggggatacaagtttccttgttgcaaacacaacccccagaaagggcctggggaaggggcaatccaggctttgcatgcttgtcaaacccagcaggaag------gcaggagCAGGAGCAGGAGCAGAGAGAAGTGCCTC-GGGGGCACCCGCCTCACAGAGCTGCTGGGAAGATGAAAGGAGTGAAAATGGGCAAGTGCCACCAACAGTGCTCCACACACATGTCCACTGTTGTTACTAGGCGTGGCAATGTGGAGGAAGGCAGGGCTGAAAACTGCATCACTTACATCCCAAATGGAAAACAGTAattcaacaaatatgtactgaatactttcaacgcaccaggc-aatggcgatacagcagccaacagaacaaagtctttgacctccaggtgcttacgttttagtacagacagacagacaccaaataaaCtacc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76233528 705 + 90941950 ACAATACTGTCAGGTATGGGCTTTGATTTCTCCCGCCTTAGAAGCTGATGCATTCGCCTGTTACAGTTTCATGGATATCGGTGGAAGACACAAGACTCGGCGAGAGGCAAAGGACTTCATTCCTCACGGTGCAGCAGGCAG---------------------------CATGAGCCCCCGAGTCCCACAGGCCTGGATGGATGTGGTGCAGGCAGTAGGTTTGCACTG-AGCTGAGGGGCACTGAGCTTAGAGGATCCACCTGTTTTATAACAGGTAGTAAGCAAGCTTGCTCTTTGTCCT-GAGGGGATACAAGTTTCCTTGTTGCAA--ACAACCCCCAGAAAGGGCCTGGGGAAGGGGCAATCCAGGCTTTGCATGCTTGTCAAACCcagcaggaaggcaggagcaggagcaggagcaggagcagagagAAGTGCCTC-GGGGGCACCCGCCTCACAGAGCTGCTGGGAAGATGAAAGGAGTGAAAATGGGCAAGTGCCACCAACAGTGCTCCGCACACATGTCCACTGTTGTTACTAGGCGTGGCAATGTGGAGGAAGGCAGGGCTGAAAACTGCATCACTTACATCCCAAATGGAAAACagtaattcaacaaatatgtactgaATGCTTTCACCGCGCCAGGC-AATGGCGATACAGCAGCCAACAGAACAAAGTCTTTGACCTCCAGGTGCTTACGTTTTAGTACAGAAAGACAGACACCAAATAAACTACC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18504436 701 + 33263144 acaataCtgtcaggtatgggctttggtttctcccgccttagaagctgatgcattcgcctgttacagtttcatggatattggtggaagacacaagactcggtgagaagcaaaggactttattcctcacagtgcagcaggcag---------------------------catgagcccccgagtcccacaggcctgaatggatgtggtgcaggtagtaggtttgcactg-agctgaggggcactgagcttagaggatccacctgttttataacaggtagtaagcaagcttgctctttgtcct-gaggggatacaagtttccttgttgcaaacacaacccccagaaagggcctggggaaggggcaatccaggctttgcatgcttgtcaaacccagcaggaag------gcaggagCAGGAGCAGGAGCAGAGAGAAGTGCCTC-GGGGGCACCCGCCTCACAGAGCTGCTGGGAAGATGAAAGGAGTGAAAATGGGCAAGTGCCACCAACAGTGCTCCACACACATGTCCACTGTTGTTACTAGGCGTGGCAATGTGGAGGAAGGCAGGGCTGAAAACTGCATCACTTACATCCCAAATGGAAAAcagtaattcaacaaatatgtactgaatgctttcaacgcaccaggc-aatggcgatacagcagccaacagaacaaagtctttgacctccaggtgcttacgttttagtacggaaagacagacaccaaataaaCtacc i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198209317 700 + 210400635 ACAGAATTGTCATATTTgggctttggtttctccctcctta------gatgcattagcctgttactgtttcatggatattggtggaagacacaagacttggcaagaggcaaaggacgttattactcacggtgaagcagccagcatgagcagcagcatatggaacagttccatgaaccccccagtcccatgggcctg-------------cacgcagcaggtgtgcactgcggttgaggagcactgagcttaggggatccacctcttttataacaggtagtaagcaagcttgct--ttgtcctaggggggatacaagtttccttgctgcaaacacaacccccagaaatggcctggggaccggacaatccaggctttgcatgcttgtcaaacccagcaggaagt-----gcaggagcaggagc---cgcagaggggagcgcctcAGGGGGCACCAGCCTCACAGAGCTGCTGGGAAGATGAAAGAAGTGAAAATGGGCAAGTGCCACCAACAGCGCTCTGCACACA--TCCACTATTGTTACTAGGGGTGGCAATGTGGAAAAAGGCAGGGCTGAAAACTGCATCACTTACATCCAAAATGGAAAGCAGTAactcaacaaaca--cactgaatgcttactaagtggcaggc-tctggagatacagcagccaacagaacaaag----tgacctccagatgcgtacattttagtacagacaggcagacaccaaataaaCTCCc i calJac3.chr1 C 0 C 0 e canFam3.chr10 40833549 2659 - 69331447 I a score=2548.000000 s hg38.chr22_KI270876v1_alt 57731 1 + 263666 a s panTro4.chr22 34435620 1 + 49737984 a i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100404088 1 - 115148730 a i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80551712 1 + 95678458 a i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80978542 1 - 96509753 a i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76234233 1 + 90941950 A i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18505137 1 + 33263144 a i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198210017 1 + 210400635 a i calJac3.chr1 C 0 C 0 e canFam3.chr10 40833549 2659 - 69331447 I e ponAbe2.chr22 30848862 2622 + 46535552 I a score=932904.000000 s hg38.chr22_KI270876v1_alt 57732 319 + 263666 ggggagcacattgtacagggccttgtagaccaaaataaggacttggaactggctacgggatgggaagccaaa-gaagtttgcacaaaagcacgtcacaatccga-ttgaacaggctgtcgagagaacaaacttcggcgatggagagctgtcggagaaaaggtggaggcaaggagaccagtttaggagataagacgaggcggggcaaggacgtgccagcttggagtgggtggtggtggtgaggtACTCGCTCACTTTGGCCTGTCACAGTCCAACACACAAGGGAAGCAGCCTTGGGAACACTCAGCAGTCAAGCAGGTGAA s panTro4.chr22 34435621 319 + 49737984 ggggagcacattgtacagggccttgtagaccaaagtaaggacttggaactggctacgggatgggaagccaaa-gaagtttgcacaaaagcatgtcacaatccga-ttgaacaggctgtcgagagaacaaacttcggcgatggagtgctgtcggagaaaaggtggaggcaaggacaccagtttaggagataagacgaggccgggcaaggacgtgccagcttggagtgggtgttggtggtgaggtACTCGCTCACTTTGGCCTGTCACAGTCCAACACACAAGGGAAGCAGCCTTGGGAACACTCAGCAGTCAAGCAGGTGAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30851484 319 + 46535552 ggggagcacactgtactgggccttgtagaccaaaataaggacttgaaactggctacgggatgggaagccaaa-gaagtttgcacaaaagcatgtcacaatctga-ttgaacaggctgttgagagaacaaacttcggtgatggagtgctgtcggagaaaaggtggaggcaaggagaccagcttaggagataagacgaggccgggcaaggacatgccagcttggagtgggtggtggtggtgaggtACTCGCCCACTTTGGCCTGTCACAGTCCAACATACAAGGGAAGCAGCCTTGGGAACACTCAGCAGTCAAGCAAGTGAA i ponAbe2.chr22 I 2622 C 0 s nomLeu3.chr7b 100404089 320 - 115148730 ggggagcacattgtacagggccttgtagaccaaaataaggacctggaactggctacgggatgggaagccaaa-gaagtttgcacaaaagcatgtcacaatccgatttgaacaggctgttgagagaacaagcttcagccatggagtgctgtcggagaaaaggtggaggcaaggagaccagtttaggagataagacgaggccgggcaaggacatgccagcttggagtgggtggtggtggtgaggtACTCACCCACTTTGGCCTGTCACAGTCCAACACACAAGGGAAGCAGCCTTGGGAACACTCAGCAGTCAAGCAAGTGGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80551713 320 + 95678458 ggggagcacactgtacagggccttgtagaccaaaataaggatttggaactgcctacgggatgggaagcctaaggaagtttgcacaaaaacatgtcacaatccga-ttgaacaggctgttgagagaacacacttcagagatggagtgctgtcggagaaaaggtagaggcaaggagaccagtttagaagcgaagacgaagccaggcaagggcatgccagcttggagtgggtggtggtggggaggtACTTGCCTACTTTGGCCTGTCACAGTCCAACACACAAGGGAAGAAGCCTTGGGAACACTCGGCAGTCAAGTAAGTGCA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80978543 320 - 96509753 ggggagcacactgtacagggccttgtagaccaaaataaggatttggaactgcctacgggatgggaagcctaaggaagtttgcacaaaaacatgtcacaatccga-ttgaacaggctgttgagagaacacacttcagagatggagtgctgtcggagaaaaggtagaggcaaggagaccagtttagaagctaagacgaagccaggcaagggcatgccagcttggagtgggtggtggtggggaggtACTTGCCTACTTTGGCCTGTCACAGTCCAACACACAAGGGAAGAAGCCTTGGGAACACTCGGCAGTCAAGTAAGTGCA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76234234 320 + 90941950 GGGGAGCACATTGTACAGGGCCTTGTAGACCAAAATAAGGATTTGGAACTGCCTACGGGATGGGAAGCCAAAGGAAGTTTGCACAAAAACATGTCACAATCCGA-TTGAACAGGCTGTTGAGAGAACACACTTCAGAGATGGAGTGCTGTCGGAGAAAAGGTAGAGGCAAGGAGACCAGTTTAGAAGCTAAGACGAAGCCAGGCAAGGGCATGCCAGCTTGGagtgtgtggtggtggggaggtACTTGCCTACTTTGGCCTGTCACAGTCCAACACACAAGGGAAGAAGCCTTGGGAACACTCGGCAGTCAAGTAAGTGCA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18505138 320 + 33263144 ggggagcacattgtacagggccttgtagaccaaaataaggatttggaactgcctacgggatgggaagccaaaggacgtttgcacaaaaacatgtcacaatccga-ctgaacaggctgttgagagaacacacttcagagatggagcgctgtcggagaaaaggcagaggcaaggagaccagtttagaagctaagacaaagccaggcaagggcatgccagcttggagtgggtggtggtggggaggtACTTGCCTACTTTGGCCTGTCACCGTCCAACACACAAGGGAAGAAGCCTTGGGAACACTCGGCAGTCAAGTAAGTGGA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198210018 304 + 210400635 ggggagcgcattgtacagggccttgtagaccaaaataaggacttggaactggctacgggacgggacgccaaaggaagtttgcacaaaagcacgtcacagtttga-ctgagcaag----------------ctttggtgatggagtgctgtaggaggataggtagaggcaaggagaccagtttgggggatgagatgagactgggcaaggacatgccagcttggagtgggcagtggtggtgagGTACTCACCCACTTTGGCCTGTCACAGTACAACACACAAGGGAAAGAGCCTTGGGAACACTAGACAGTCATGCGAGTGGA i calJac3.chr1 C 0 C 0 e canFam3.chr10 40833549 2659 - 69331447 I a score=537404.000000 s hg38.chr22_KI270876v1_alt 58051 164 + 263666 CAGAGGAGCA----TCCGTTCACTGTCATCCTCAGGGGCTGCTTCCAGGTACTGGAGGTAGAAGGCAGGCAGCCACAGGGTGAAGATCAAGTAATT-----GGAGTCAGCCGGTAGAAACTTATTCCAGAAGTTTGCCACAAAAGAAACAACTTAGggccaggtgtggtggct s panTro4.chr22 34435940 164 + 49737984 CAGAGGAGCA----TCCGTTCACTGTCATCCTCAGGGGCTGCTTCCAGGTACCGGAGGTAGAAGGCAGGCAGCCACAGGGTGAAGATCAagtaatt-----ggagtcagccggtagaaacttattccagaagtttgccacgaaagaaacaacttagggccaggtgtggtggct i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30851803 164 + 46535552 CAGAGGAGCA----TCTGTTAACTGTCATCCTCAGGGGCTGCTTCCAGGTACTGGAAGTAGAAGGCAGGCAGCCACAGGGTGAGGATCAAGTAATT-----GGAGTCAGCCGGTAGAAACTTATTCCAGAAGTTTGCCACGAAAGAAACGACTTAGggccaggtgtggtggct i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100404409 164 - 115148730 CAGAGGAGCA----TCCGTTAACTGTCATCCTCAGGGGCTGCTTCCAGGTAGTGGAGGTAGAAGGCAGGCAGCCACAGGGTGAAGATCAAGTAATT-----GGAGTCAGCCGGTAGAAACTTATTCCAGAAGTTTGCCACGAAAGAAACAACTTAGggccaggtgtggtggct i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80552033 164 + 95678458 CAGAGGAGCA----TCCGTTAACCGTCATCCTCAGGGGCTGCTTCCAGGTACTGGAGGTAGAAGCCAGGCAGCCACGGGGTGAAGATCAagtaatt-----ggaatcagctggtagaaacttattccagaagtttgccacaaaagaaacaacttagggccgggtgtggtggct i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80978863 164 - 96509753 CAGAGGAGCA----TCCGTTAACCGTCATCCTCAGGGGCTGCTTCCAGGTACTGGAGGTAGAAGCCAGGCAGCCACGGGGTGAAGATCAAGTAATT-----GGAATCAGCTGGTAGAAACTTATTCCAGAAGTTTGCCACAAAAGAAACAACTTAGggccgggtgtggtggct i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76234554 164 + 90941950 CAGAGGAGCA----TCCGTTAACTGTCATCCTCAGGGGCTGCTTCCAGGTACTGGAGGTAGAAGCCAGGCAGCCACGGGGTGAAGATCAAGTAATT-----GGAATCAGCTGGTAGAAACTTATTCCAGAAGTTTGCCACAAAAGAAACAActtagggccgggtgtggtggct i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18505458 164 + 33263144 CAGAGGAGCA----TCCGTTAACTGTCATCCTCAGGGGCTGCTTCCAGGTACTGGACGTAGAAGCCAGGCAGCCACGGGGTGAAGATCAAGTAATT-----GGAATCAGCTGGTAGAAACTTATTCCAGAAGTCTGCCACAAAAGAAACAACTTAGggccgggtgtggtggct i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198210322 162 + 210400635 CTGAGCAGCG----TCTGCTACCTGTCATCCTCAGGGGCTGCTTCCAGGTAGTGGAGGTAGAAG-CAGGCAGCTGCAAGGTGAAGACCAAGTAACT-----GGAATGGGCCAGCAGAAACTGATTTCAGAAGTTTGCCACAAGAGAAGTAACTTAGGTccgggca-ggtggct i calJac3.chr1 C 0 C 0 s canFam3.chr10 40836208 172 - 69331447 CAGGGAGGCAGCCCTCCACCTGCTGTCACCAGAAGGGGCCACTTCAGGGTCACAGAGGGAGAAGCCTGAGCACAGCAGGGTGAGGGCC-GGTAACTGGTAAGGAGCGGGTGGGCAGAAACTCCTTCCAGAAGTTTGTCATGAGGGAAGGGGCCTGGGATCTCGCGGAGTTGTT i canFam3.chr10 I 2659 I 368 a score=2947235.000000 s hg38.chr22_KI270876v1_alt 58215 1037 + 263666 cacacctataattctagcactttgggaggccgaggcgggtgaatctttgaggtcaagagtttgagaccagcctgaccaacatggtgaaactccgtctctaccaaaaatacaaaaattagccaggcttggtggtgcatgcctat----aatcccggctactcacgaggctgacgaaagagaattgcttgaacctgggaggcagaggttgcagtgagtcgagatagcaccactgcactgcagcctgggcaacagagtgagaccctgtctcaa-----aaaaaaaaaa----aaaaaaaaaa---------------------aaGAGTACAAGGAATAACTTGAGATTTTCCAA----TTTTTTTTTTAAC---TTAAGATCTAagcacgcttaagtgccaaagggactattgagaggaagaggcaaaccaggcaagggaggaaactgaagcaaagcaccgagcaggtgggaaaggctgggatgcagagcacaggtgt-ggggttcacggtgatgtgaagaatgcctctaatagaacgag--agagaaggggaaagacaccctgtgtggaattcaagtaggcttgtagatctggtagggaaacttcattcagggagactatgtctgacaacctccatat--tctgtgaaataggaagcatgatgatctcatatggtgaagtgaagggagttagagatttatggattatggagaaTTTCAGAGATTTGGGAATTATTGGCTGAGAAACGAAACAAATGCAGCAAGGGATGGGTT-TCAGCACAGGTAAGAAAGAAAAGAggccaggtgtgctggctcatgcctgtaatgccagcactttgggaggctgaggtgggaggatcacttgaggccaggagttcgagaccagcctgggcaacacagtgtagccccatctctacaaaaaatgtt--------gccgggtgtggtggcgtgcacctgtagttccagcttctcgggaggctgaggtgggaggatcacttgagcccaggagtttgaggctacagtgagccttgatcacaccactgcactccagcctgggcgacacagtgagaccctgtctcaaggggaaaaaaa s panTro4.chr22 34436104 1056 + 49737984 cacacctacaattctagcactttgggaggccgaggcgggtgaatctttgaggtcaagagtttgagaccagcctgaccaacatggtgaaactccgtctctaccaaaaatacaaaaattagccgggcttggtggtgcatgcctat----aatcccagctactcatgaggctgacgaaagagaattgcttgaacctgggaggcagaagttgcagtgagtcaagatagcgccactgcactgcagcctgggtgacacagtgagaccctgtctcca-----aaaaaaaaaa----aaaaaaaaaa--aaa-aaaaaaccaagaaagaagagtacaaggaataacttgagattttccaa-----tttttttttaac---ttaagatctaagcacgcttaagtgccaaagggactattgagaggaagaggcaaaccaggcaagggaggaaactgaagcaaagcaccgagcaggtgggaaaggctgggatgcagagcacaggtgt-ggggttcacggtgatgtgaagaatgcctctaatagaacgag--agagaaggggaaagacaccctgtgtggaattcaagtaggcttgtagatctggtagggaaacttcattcagggagactatgtctgacaacctccatattctctgtgaaatagcaagcatgatgatctcatatggtgaagtgaagggagttagagatttatggattatggagaaTTTCAGAGATTTGGGAATTATTGGCTGAGAAACGAAACAAACGCAGCAAGGGATGGGTT-TCAGCACAGGTAAGAAAAAAAAGAggccaggtgtggtggctcacgcctgtaatgccagcattttgggaggctgaggtgggaggatcacttgaggccaggagttcgagaccagcctgggcaacacagtgtagccccatctctacaaaaaatgtt--------gccgggtgtggtggcgtgcacctgtagttccagcttctcgagaggctgaggtgggaggatcacttgagcccaggagtttgaggctacagtgagccttgatcacaccactgcactccagcctgggcgacacagtgagaccctgtctcaaggggaaaaaaa i panTro4.chr22 C 0 M 195 s ponAbe2.chr22 30851967 1062 + 46535552 cacacctataattctagcactttgggaggccgaggcgggtgaatctttgaggtcaagagtttgagaccagcctgaccaacatggtgaaactccgtctctaccaaaaatacaaaaattagccgggcttggtggtgcatgcctat----aatcctggctactcacaaggctgacgaaagagaattgcttgaacctgggaggcagaggttgcagtgagtcgagatagcaccactgcactgcagcctgggcgacagagtgagaccctgtctcaa-----aacaaaaaca----acaacaacaacaaaa-aaaAAACAAGAAAAACAGAGTACAAGGAATAACTTGAGATTTTCCGATTttttttttttttaactttttaagatctaagcacgcttaagtgccaaagggactactgataggaagagacaaaccaggcaagggaggaaactaaagcaaagcaccaagcaggtgggaaaggctgggatgcagagcacaggtgt-ggggttcacggtgatgtgaagaatgtctctaatagaacgac--agagaaggggaaagacaccctgtgtggagttcaagtaggcttatagatctggtaatgaaaattcattcagggagactatgtctgacaacctccatattctctgtgaaataggaagcatgatgatcTCATA---TGAAGTGAAGGGAGTCAAAGATTTATGGATTATGGAGAATTTCAGAGATTTGGGAATTATTGGCTGAGAAACAAAACAAACGCAGCAAGGGATGGGTT-TCAGCACAGGTAAGAAAGAAAAGAggccaggtgtggtggctcatgcctgtaatgccagcactttgggaggctgaggtgggaggatcacttgaggtcaggagttcgagaccagcctgggcaacacagtggagccccatctctacaaaaaatttt--------gccgggtttggtggtgtgcacctgtagttccagcttctcgggaggctgaggtgggaggatcacttgagcccaggagtttgaggctacagtgagccttgatc-caccactgcactccagcctgggtgacacagtgagaccctgtcttaaggggaaaaaaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100404573 1051 - 115148730 cacgcctataattctagcactttgggaggccaaggcgggtgaatctttgaggtcaagagtttgagaccagcctggccaacatggtgaaactccgtctttaccaaaaatacaaaaattagctggg-ttggtggtgcgtgcctat----aatcccagctactcacgaggctgacgaaagagaattgcttgaacctgggaggcagcgggtgcggtgagtcgagatagcatcactgcactgcagcctgggcaatagagtgacaccctgtttcaa-----aaaaaaaaaa----aaaaaagaaa--gaa-agaaaA---------AAAAGTTCAATGAATAGCTTGAGATTTTCCaa---tttttttttttaactttttaagatctaagcacgcttaagtaccaaagggactactgagaggaagaggcaaaccaggcaagggaggaaactgaagcaaagcaccgagaaggtgggaaaggctgggaggcagagcacaggtgt-ggggttcacggtgatgtgaagaatgcctctaatagaacgag--agagaaggggaaagacaccctgtgtggaattcaagtaggcttgtagatctggtagtgaaaattcattcagggagattgtgtctgacaacctccatattctctgtgaaataggaagcatgatgatctcatatggtgaagtgaagggagttagagatttatggattatggagaaTTTCAGAGATTTAGGAATTATTGGCTGAGAAACAAAACAAACGCAGCAAGGGATGGGTT-TCAGCACAGGTGAGAAAGAAAAGAggccaggcgtggcggctcatgcctgtaatgccagcactttgggaggctgaggtgggaggatcacttgaggccaggagttcgagaccagcctgggcaacacagtgaagccccatctctacaaaaaatttt--------gccgggtgtggtggcgtgcacctgtagttccagcttctcaggaggctgaggtgggaggatcacttgagcccaggagtttgaggctacagtgagccttgatcacaccactgcactccagcctgggcgacagaatgagaccctgtcttaaggggaaaaaaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80552197 1064 + 95678458 cacgcctataattccaggactttgggtggccgaggcgggtgcatccttgaggtcaggagtttgaggccagcctggccaacatggtgaaattctgtctctaccaaaaatacaaaaattagccaggcttggtggtgcgtgcctataatcaatcccagctactcaggaggctgacaaagtagaattgcttgaacctgggaagcggaggttgcagtgagtcaagatagcgccattgcactgcagcctgggcaacagagtgagaccctatctcaa-----aaaacaaaac----aaacaaacaa--aaacccaaaaacaagaaaaaaaagttcaaggaataacttgagattttccaa----ttttttaaaaaactttttaagatttaagcacgcttaagtgccaaagggactattgagaggaagaggcaaaccaggcaagggaggaaactgaagcaaagcaccgaggaggtgggaaaggctgggatgcagagcgcaggtgt-ggggttcacagtgatgtgaagaatgcccttaacagaatgag----agaaggggaaggacaccctgtgtgggatgcaagtcggtttatagatctggtagtgaacactcattccgggaaactgtgtctgacaacctccatattctctgtgaaaccggaagcatgatgatctcatatggttaagggaagggagttacagatttatggattatggagaaTTTCAGAGATTTGGGAATTATTGGCTGAG----AAAACAAACGCAGCAATGGATGGGTGAAAAGCAC----AAGAAAGAACAGACgccaggtgtggtggctcacgcctgtaataccagcacttcgggaggctgaggttggaggatcacttgaagccagcagttcgagacctgcctgggcagcacagtggagccccatctgtacaaaaaaattcaaaaaatagccaggtgtggtggtgtgtgcctgtagttccagcttcttgggaggctgaggtgggaggatcacttgagcccaggagtttgaggctaccgtgagccttgatcacaccactgcactccagcctgggtgacacagtgagaccctgtcttaaggggaaaaaaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80979027 1077 - 96509753 cacgcctataattccaggactttgggtggccgaggcgggtgaatccttgaggtcaggagtttgaggccagcctggccaacatggtgaaattctgtctctaccaaaaatacaaaaattagccaggcttggtggtgcgtgcctataatcaatcccagctactcaggaggctgacgaaggagaattgcttgaacctgggaagcggaggttgcagtgagtcaagatagcgccattgcactgcagcctgggcaacagagtgagaccctatctcaa-----aaaacaaaac----aaacaaacaa--aaaCCCAAAAACAAGAAAAAAAAGTTCAAGGAATAACTTGAGATTTTCCAA----TTTTTTAAAAAACTTTTTAAGATTTAAGCACGCTTAAGTGCCAAAGGGACTATTGAGAGGAAGAGGCAAACCAGGCAagggaggaaactgaagcaaagcaccgaggaggtgggaaaggctgggatgcagagcacaggtgtgggggttcacagtgatgtgaagaatgcccttaacagaatgagagaaagaaggggaaggacaccctgtgtgggatgcaagtcggtttatagatctggtagtgaacactcattccgggagactgtgtctgacaacctccatattctctgtgaaaccggaagcatgatgatctcatatggttaagggaagggagttacagatttatggattatggagaaTTTCAGAGATTTGGGAATTATTGGCTGAGAAACAAAACAAACGCAGCAAGGGATGGGTGAAAAGCACAAGAAAGAAAGAAAAGAggccaggtgtggtggctcacgcctgtaataccagcacttcgggaggctgaggttggaggatcacttgaagccagcagttcgagacctgcctgggcagcacagtggagccccatctgtacaaaaaaattcaaaaaatagccaggtgtggtggtgtgtgcctgtagttccagcttcttgggaggctgaggtgggaggatcacttgagcccaggagtttgaggctaccgtgagccttgatcacaccactgcactccagcctgggcgacacagtgagaccctgtcttaaggggaaaaaaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76234718 1077 + 90941950 cacgcctataattccaggactttgggtggccgaggcgggtgaatccttgaggtcaggagtttgaggccagcctggccaacatggtgaaattctgtctctaccaaaaatacaaaaattagccaggcttggtggtgcgtgcctat----aatcccagctactcagcaggctgacgaaggagaattgcttgaacctgggaagcggaggttgcagtgagtcaagatagcaccattgcactgcagcctgggcaacagagtgagaccctatctcaaaaaacaaaacaaaac----aaacaaacaa--aaacccaaaaacaagaaaaaaaagttcaaggaATAACTTgagattttccaa----ttttttaaaaaactttttaagattTAAGCACGCTTAAGTGCCAAAGGGACTATTGAGAGGAAGAGGCAAACCAGGCaagggaggaaactgaagcaaagcACCGAGGAGGTGGGAAAGGCTGGGATGCAGAGCGCAGGTGT-GGGGTTCACAGTGATGTGAAGAATGCCCTtaacagaatgagagagagaaggggaaagacaCCCTGTGTGGGATGCAAGTCGGTTTATAGATCTGGTAGTGAACACTCATTCCGGGAGACTGTGTCTGACAACCTCTGTATTCTCTGTGAAACCGGAAGCATGATGATCTCATATGGTTAAGGGAAGGGAGTTACAGATTTATGGATTATGGAGAATTTCAGAGATTTGGGAATTATTGgctgagaaacaaaacaaacgcAGCAAGGGATGGGTGAAaagcacaagaaagaaagaaaagaggccaggtgtggtggctcacgcctgtaataccagcacttcgggaggctgaggttggaggatcacttgaagccagcagtttgagacctgcctgggcagcacagtggagccccatctgtacaaaaaaattcaaaaaatagccaggtgtgggggtgtgtgcctgtagttccagcttctcgggaggctgaagtgggaggatcacttgagcccaggagtttgaggctaccgtgagccttgatcacaccactgcactccagcctgggcgacacagtgagaccctgtcttaaggggaaaaaaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18505622 1072 + 33263144 cacgcctataattccaggactttgggtggccgaggcgggtgaatccttgaggtcaggagtttgaggccagcctggccaacatggtgaaattctgtctctaccaaaaatacaaaaattagccaggcttggtggtgcgtgcctat----agtcccagctactcaggaggctgacgaaggagaattgcttgaatctgggaagcagaggttgcagtgagtcaagatagcgccattgcactgcagcctgggcaacagagtgagaccctatctcaa-----aaaacaaaacaaaaaaacaaacaa--aaaCCCAAAAAC---AAAAAAAAGTTCAAGGAATAACTTGAGATTTTCCAA----TTTTTAAAAAAACGTTTTAAGATTTAAGCACGCTTCAGTGCCAAAGGGACTATTGAGAGGAAGAGGCAAACCAGGCAagggaggaaactgaagcaaagcaccgaggaggtgggaaaggctgggatgcagagcgcaggtgt-ggggttcacagtgatgtgaagaatgcccttaacagaacaaa-gagagaaggggaaagacaccctgtgtgggatgcaagtcggtttatagatctggtagtgaacactcattccgggagactgtgtctgacaacctccgtattgtctgtgaaaccggaagcatgatgatctcatatggttaagggaagggagttacagatttatggattatggagaaTTTCAGAGATTTGGGAAATATTGGCTGAGAAACAAAACAAACGCAGCAAGGGATGGGTGAAAAGCACAAGAAAAAAAGAAAAGAggccaggtgtggtggctcacgcctgtaataccagcacttcgggaggctgaggttggaggatcacttgaagccagcagttcgagacctgcctgggcagcacagtggagccccatctgtacaaaaaaattcaaaaaatagccaggtgtggtggtgtgtgcctgtagttccagcttctcgggaggctgaggtgggaggatcacttgagcccaggagtttgaggctaccgtgagccttgatcacaccactgcactccaacctgggcgacacagtgagaccctgtcttaaggggaaaaaaa i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198210484 1058 + 210400635 catgcctttaattccagcactttgggagatcaagacaggtgaatccttgaggtcaggagtttgaggccagcctggccaacatgatgaaaccctgtctctactaaaaatacaaaaattagccaggcttggtggtgcaggcccat----aatcctggctactcgggaggctg---aggcagaattgcttgaatctgggaggtggagattgcagtgcatcaggacagcgccactacactggagcccaggcaacagagtgagatgccgtctcaa----caaaacaaaac----aaaCCCCACC--AAATTAAAAAAAATAAAACAATAAAAAGAGGAATAACTTGAGATTTTTCCA---TTTTTCTTTTTAAC----TAAGATTTAAGCATGCTTAAGAGCCTAAGGGACTATTGAGAGGAAGAGGTTAACCAGGCAAGGGAAGAAACGGAAGCGGTGCACGGAGCAGGTGGGAAAGGCTGGGATGCAGATCACATGTGT-GGGGTTCACGGTGATGTGAAGAATGCCTGTATTAGAACAAG--AGAGAAGGGGAAAGCCACCCTGGGTGAAATGCAAGTAGGTTTATCGATCTGGTAGCAAAAATTCATTCAGAGACAGTGTGTCTGACAGGCTCCATGTTCTCTGTGAAATAGGAAGCATGATGATCTCGTATGGTGAAGTAAAGGGAGTTAGAGATGTATGGATTATGGAGAATTTCAGGGATTTGGGAATTATTGGCTCAGAAAC----CAAATACAGCAAGGGATGGGTGAAAAGCACAGGTAACAAAGGAAAGAggtcaggagtggtggttcacggctgtaacgccagcactttgggaggctgaagtggaagtatcacttgaggccaggagtttgagaccagcctgggcaacatagtgaagccccatctctacaaaaaattta-aagaacagttgggtgtggtggcgcatgcctgtagttccagcttcttgggaggctgaggtgggaggattgcttgagtccaggagtttgaggcta--gtgggctgtgatcataccactgcactccagcctgggcaatgcagtgagaccctgtcttaaggggggaaaaa i calJac3.chr1 C 0 C 0 e canFam3.chr10 40836380 368 - 69331447 I a score=556065.000000 s hg38.chr22_KI270876v1_alt 59252 260 + 263666 gaaaag--aaaCAGGGAGGAAAGGGCTAGGCAGGACATATTTTCTATGGCTGAACAAAAAGTGAAGGAGCCTGGGTGGCAGCCGGAGAGCCAGGGGCAGCAGGGACAGAGGAGGCAAGGCAGGGACATAACACTTTGATAAGGTCAAGTGGGGCCACAGCCCCTGGCAAGGACAGTGTCTGTGGTACAGTAAAGGCAGCAGTTGAATCTAGGGGAGGGTGGACGGTGAAGAAGTGAAGCTGAAAGATTTCAGAAG--------------CAGCTTT s ponAbe2.chr22 30853029 260 + 46535552 gaaaag--aaaCAGGAAGGAAGGGGCTAGGCAGGACATATTTCCTATGGATGAACAAAAAGTGAGGGAGCCTGGGTGGCAGCCGGACAGCCAGGGGCAGCAGGGACAGAGGAGGCAAGGCAGAGAAATAACACTTTGATAAGGTCAAGTGGGGCCACAGCCCCTGGCAAGGACGGTGTCTGTGGTGCAGTAAAGGTAGGAGTTGAATCTAGGGGAGGGTGGACAGTGAAGAAGTGAAGCTGAAAGATTTCAGAAG--------------CAGCTTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100405624 257 - 115148730 gaaaag--aaaCAGGAAGGAAAGGGCTAGGCAGGACATATTTTCTATGGTTGAACAAAAAGTGAGGGAGCCTGGGGGGCAGCCGGAGAGCCAGGGGCAGCAGGGACAGAGGAGGCAAGGCAG-GAAATAACACTTTGATAAAGTCAAGTGGGGCCACAGCCCCTGGCAAGGACAGTGTCTGTGGTACAGTAAAGGCAGGAGTTGAATCTAGGGGAGGGTGGATGGTGA--GAGTGAAGCTGAAAGACCTCAGAAG--------------CAGCTTT i nomLeu3.chr7b C 0 M 100 s rheMac3.chr10 80553261 261 + 95678458 gaaaagaaaaaCAGGAAGGAAAGGGCGAGGCAGGACATATTTTTTATGGCTGAACAAAAAGTGAGGGAGCCTGGGTGGCAGCTGGAGAGCTAGGGGCAGCAGGGACAGAGGAGGCAAGGCAGGAAAATGACACTTTGATAAGGTCAAG---------------TGATAAGGACAGTGTCTGTGGTACAGTAAAGGCAGCAGTTGAGTCTAGGGGAGGGTGGACGGTGAAGAAGTGAAGCTGAAAGATTTCAGAAGCAGAGGCACAAAATCAGCTTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80980104 259 - 96509753 gaaaag--aaaCAGGAAGGAAAGGGCGAGGCAGGACATATTTTTTATGGCTGAACAAAAAGTGAGGGAGCCTGGGTGGCAGCCGGAGAGCTAGGGGCAGCAGGGACAGAGGAGGCAAGGCAGGAAAATGACACTTTGATAAGGTCAAG---------------TGATAAGGACAGTGTCTGTGGTGCAGTAAAGGCAGCAGTTGAGTCTAGGGGAGGGTGGACGGTGAAGAAGTGAAGCTGAAAGATTTCAGAAGCAGAGGCACAAAATCAGCTTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76235795 257 + 90941950 gaaaag--aaacaggaaggaaagggCGAGGCAGGacatattttttatggctgagcaaAAAGTGAGGGAGCCTGGGTGGCAGCC--AGAGCTAGGGGCAGCAGCGACAGAGGAGGCAAGGCAGGAAAATGACACTTTGATAAGGTCAAG---------------TGATAAGGACAGTGTCTGTGGTGCAGTAAAGGCAGCAGTTGAGTCTAGGGGAGGGTGGACGGTGAAGAAGTGAAGCTGAAAGATTTCGGAAGCAGAGGCACAAAATCAGCTTT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18506694 256 + 33263144 gaaaCG--AAACAGGAAGGAAAGGGCGAGGCAGGACATATTTTTTATGGCTGAACAAAAAGTGAGGGAGCCTGGGTGGCAGCCGGAGAGCTAGGGGCAGCAGGGACAGAGGAGGCAAGGCAGGAAAATGACACTTTGATAAGGTCAAG---------------TGATAAGGGCAGTGTCTGTGGTGCAGTAAAGGCAGCAGTTGAGTCTAGGGGAGGGTGGACGGT---GAAGTGAAGCTGAAAGATTTCAAAAGCAGAGGCACAAAATCAGCTTT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198211542 271 + 210400635 ---aag--aaaaaggaaggaaaGGGCTAGGCAAGACATATTTTCTATGGCTGAACAAAAAGCAAGGGAGCCTGGGTGGCAGCAGGAGAGCCAGGGGCAGCAAGAACAGAAGCGGCAAGGCAGAGAAATGACACCTGGACAAGGTCAAGTGGTGCGATAGCCCCTAGCAAGTACAATGTCTGAGGTACAGTAAAGGCAGCAGCTGAGTCTAGGGGAGGGTGGACGGTGAGGAAGTGAAGCTGGAAGATTTCAGAAGTAGAAGCACAACATCAGCTTT i calJac3.chr1 C 0 C 0 e canFam3.chr10 40836380 368 - 69331447 I e panTro4.chr22 34437160 195 + 49737984 M a score=195986.000000 s hg38.chr22_KI270876v1_alt 59512 127 + 263666 TGGACAGACTGGAGTTCA-CAGCTGGGGAAGCTGAGAGCAGCTGACACA-----------------CGCTTACCTTCTGGCTTCTCATCACCATTTAGAGCGTCTCACCTTAGAACGCCTGGCACTTTTCCTTCTTGTCCCCCCC s ponAbe2.chr22 30853289 144 + 46535552 TGGACAGACTGGAGTTCAGCAGCTGGGGAAGCTGAGAGCAGCTGACACGGGCCCACCTGCTGGCCTCGTTTACCTTCTGGCTTATCATCACCATTTAGAATGTCTCACCTTAGAACGCCTGGCACTTTTCCT-CTTGTCCCCCCC i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80553522 143 + 95678458 TGGACAGATTGGAGTTCAGCAGTTGGGGAAGCTGAGAGCAG-TGACACGGACCCAGCTGCTGGCCTCGTTTACCTTCTGGCTTATCGTCACCATTTAGAATGTCTCACCTTAGAACGCCTGGCACTGTTCCTTCTTGT-ACCCCC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80980363 143 - 96509753 TGGACAGATTGGAGTTCAGCAGTTGGGGAAGCTGAGAGCAG-TGACACGGACCCAGCTGCTGGCCTCGTTTACCTTCTGGCTTATCGTCACCATTTAGAATGTCTCACCTTAGAACGCCTGGCACTGTTCCTTCTTGT-ACCCCC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76236052 143 + 90941950 TGGACAGATTGGAGTTCAGCAGTTGGGGAAGCTGAGAGCAG-TGACACGGACCCAGCTGCTGGCCTCGTTTACCTTCTGGCTTATCGTCACCATTTAGAATGTCTCACCTTAGAACGCCTGGCACTGTTCCTTCTTGT-ACCCCC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18506950 140 + 33263144 TGGACAGATTGGAGTTCAGCAGCTGGGGAAGCTGAGAGCAG-TGACACGGACCCAGCTGCTGGCCTCGTTTACCTTCTGGCTTATCGTCACCATTTAGAATGTCTCAC---AGAACGCCTGGCACTGTTCCTTCTTGT-ACCCCC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198211813 131 + 210400635 CGGACAGACTGGAGTTCAGCAGCGGGGGAAGCTGAGAGCAGCTGACACAAGCCCAGCCGCTGGCCTCCCTCACCTTCTGGC-GACCG--AGCATTTGTA--GCCTCACCTCGGGAC-----GCAGTTTTCCTTCTCGC-TTT--- i calJac3.chr1 C 0 C 0 e canFam3.chr10 40836380 368 - 69331447 I e panTro4.chr22 34437160 195 + 49737984 M e nomLeu3.chr7b 100405881 100 - 115148730 M a score=50332.000000 s hg38.chr22_KI270876v1_alt 59639 37 + 263666 TGCACCCCGCTTAAAAAGTCAAATCCAAGTGGTATCT s ponAbe2.chr22 30853433 36 + 46535552 GGC-CCCCGCTTAAAAAGTCAAATCCAAGTTGTATCT i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80553665 36 + 95678458 GAC-CCCCACTTAAAAAGTCAAATCCAAGTTGTATCT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80980506 36 - 96509753 GAC-CCCCACTTAAAAAGTCAAATCCAAGTTGTATCT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76236195 36 + 90941950 GAC-CCCCACTTAAAAAGTCAAATCCAAGTTGTATCT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18507090 36 + 33263144 GAC-CCCCACTTAAAAAGTCAAATCCAAGTTGTATCT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198211944 18 + 210400635 ----TCCC---------------TCCAAGTTGTATCT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40836748 28 - 69331447 TGC-CCTCCGACTAGAAGTCAAATCCAAG-------- i canFam3.chr10 I 368 C 0 e panTro4.chr22 34437160 195 + 49737984 M e nomLeu3.chr7b 100405881 100 - 115148730 M a score=58104.000000 s hg38.chr22_KI270876v1_alt 59676 23 + 263666 TTGGAGCCTCAGGCAGAGGCAAC s ponAbe2.chr22 30853469 23 + 46535552 TTGGAGCCTCAGGCAGAGGCAAG i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80553701 23 + 95678458 TTGGAGCCTCAGGCAGAGGCAAC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80980542 23 - 96509753 TTGGAGCCTCAGGCAGAGGCAAC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76236231 23 + 90941950 TTGGAGCCTCAGGCAGAGGCAAC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18507126 23 + 33263144 TTGGAGCCTCAGGCAGAGGCAAC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198211962 23 + 210400635 CTGGAGCCTCAGGCAGAGGCAAC i calJac3.chr1 C 0 C 0 s mm10.chr15 77078941 23 + 104043685 TTAGAGCCTGGAGTTCAGGCAAG i mm10.chr15 N 0 C 0 s canFam3.chr10 40836776 19 - 69331447 ----AGCCTCAGGAGGAGGTGAC i canFam3.chr10 C 0 C 0 e panTro4.chr22 34437160 195 + 49737984 M e nomLeu3.chr7b 100405881 100 - 115148730 M a score=26364.000000 s hg38.chr22_KI270876v1_alt 59699 13 + 263666 AGGGAACGAGGAT s panTro4.chr22 34437355 13 + 49737984 AGGGAACGAGGAT i panTro4.chr22 M 195 C 0 s ponAbe2.chr22 30853492 13 + 46535552 AGGGAACGAGGAT i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80553724 13 + 95678458 AGGGAACGAGGAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80980565 13 - 96509753 AGGGAACGAGGAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76236254 13 + 90941950 AGGGAACGAGGAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18507149 13 + 33263144 AGGGAACGAGGAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198211985 10 + 210400635 --AGAACAAGAT- i calJac3.chr1 C 0 C 0 s mm10.chr15 77078964 10 + 104043685 AAAGAAGGAG--- i mm10.chr15 C 0 I 1 s canFam3.chr10 40836795 13 - 69331447 ATGGATCCCGGAT i canFam3.chr10 C 0 C 0 e nomLeu3.chr7b 100405881 100 - 115148730 M a score=20839407.000000 s hg38.chr22_KI270876v1_alt 59712 5135 + 263666 TAATACACACAGCCC--AAAGAATGGTGTTTCTCTCTTTTATTTAAAAACAGTGCTTCATTACCATGTGCAAAGGCTGAGGCAGTGCTCCTCCTTCGCTTAGAGTTTATAAAAGCCAGCAACATGATCAATAATTTATACACATGGAGAGTAATACAAAAAAATAAGGAATAAAAGCTAAAGATCTAACTACTCCGACCTTCACAATTCCAGCTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAAGCTACTATACAATATGATTCTTAACGAGAA--------------GGGAAGGGAATTAGAGACTGTCACAAAGCCCTGGGATGCTTCTCTGGAGTTAGCAGGGAAACAGGACCCTGGGCAAGCAGCTCGGGTGTCCTAGGAAGTGATTCTGGGGGAGGA---CGGGAGGGGA-GAGAGAAGGCTAGGTGGTCGATTACACAAGCATCC-CATGTAATGCCCCCATGCCCC-AAAGGTACCTGTTTTGCCATGGCAATGGGA---GGGGCTGGAGGAACAGCATGTTGCATGTAGGGATGGTCCGGTCCCTGCCATGG----GGAGTGGGGAGAAGAGGAGAGGTTCTGTGGCA-TTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGGTCAGCCTGTCAGGGACAAGTACACTCCACCGGCTCTCTTCTCGCTTTGCAGCCCTAGCTTACGCGTGTCAGCCCCAGGTTTGCTCCAGCTATTCACAAGCAGAA-TA-TAACACAAG--AAAAACAATTCATATCCCTTAGGG-AAAAAAGAGGATCAATTCATCACTCAATATATAATACAGCCAAAATGAGCTGCCAAAACAAGCACACACAC--------AAATACTGTGAACAGAAAAATACAAGAAAATGACTAAGCTGGG--AGTCTTGACGGGG-TATGGACATTGCTTAAAGCAC-TTATCAGTCCCCAGAAAAACCAAACCAAAAA-CATTTTTTAAAAATTCA-GAAACTCATGTACCCCCTGGGAAACTGGTGTTGGTAACAAAGGGCAGGGGGT--------GGGGAGAGAAAAGAGAATCACTGCTCCCTTTTTGCTCGCCAGTGTGAGTGGAGTC---CTCAGGTCACCGGCATGTACACAAGTACCAGACAA--GGAG--GACCAAGTCCCTCTGCTGGTGGCCTCCTAAAAGGCAAGGCTTGAGTTTTGGCTGATGAGCAGTTCTCTCCGTTACCAATCCCTGCCAACCAGCACTACCATGGCTGAATTGATCTACCG--TTTTCCTGAGTAAACTGTAACTGGCTACAGTTTCGGTAACATGGAAAAGAACTCAGCTACTACAGCCAACTGCAAT--ACTTCAGGAACCCCCTCCATCCCTGGGC---TCCTCACTCCTAGTGCATCTGATTGAGGAATCTGATAACTTGCTGCAGTCTGGTCTGTTAGCCTCATTTGCAAAGAAAGGTGCC-AGGGACTCTATTACACTCACTAAACCAGAGGGCACACGCTGGCTTAGGACACCCAGAGCCTACTTGGAA-AGGGCCCTGTTTCATGCTCTAGCTCTTGGATGGCTATTGCCTGGCTGATCAGTAAAGCAAGTATGAAGGAAGTACATAGGA-AAAGGAAAGGGAGGGAAGAGGCTTTTGGACAGTAACATTTCCAAAA-------AAATATAGTGTTTTATGCAACA--GAGAATCAAGTTTCACT-GTGTATACTACAAATGGTCAAACATTTTCAAGAGCATGACAAAATAAAAACACACAAATTTACGTCTGATGTTCACCTTGCCCACTATTTTTTTTTCCTATCTTAAAACAGTGCAAACAGG-TAACTTATGCTTT-TAAAACACCACGACCCCTTCCCCAC-----CCCCCAAAGTCCCTTTCCTCCTAGTATCTGGGGG----AAAATCTGCAATTCTGCAAATGTTACTGCGCTAGAGG-TTGCAAGCAGCGGAGAACTGGCTGAACTTGGCAAAAGGCAAGGACTGGTCAA--AGC--TTCCC-------CTTTCTCCTCCTTAAACATCTAAGTGCTTTCCAGTCTGTCCCTTGGTTGGCCTTGTTCTCCTGCCAGAGGGAAGGGGG----TTCATCATGCCCTTCTTGCATATCCTTGGGGTTGCTTCCATCCCTGTTTGAT----GTCTCCCTCATGTCTGGAAGCTATATAACTAGTTACAGGATGGTAGTGATTAACCCACTTATCTGCTAGATCTCTAGTAAAGCATAATTCTAAGCTA-AGAGCAGTTCAGCCCCTGAGGAGTCACACATTTGAGGAAAAGCTGCTATCGATGACTTCTATTGTCTAGATTTCCACTAGCTCCCCTCAGACTAAAAGTTGTGCCCCAGTCCACTTCTTTCTCAAAG--------------------AAAAAAAAAT---GTTGGCTCAATTCAGACTGTGGCTGTTGAAGGATGATGGTGATAGTAGGTTTTGTTAAACCTGAGAGCCTGACAAATGGTGAATCACAATGGCTGATCTGAGTTA--ATGGAAATTGAACT-AGGTGACATGAGGAATTCTGGAAAATGCCTATGGGCAGCTCTCTGGGCTCTAAGAGGGACATGGAGATAAAGGTGTTCACTAGAGGCCTCCTTTAAGGAGCCCAGCTTCCAAG------------AGTACAGAAAGTCCAGGTCATGAAC----TATAGTAAAGCTGAAAAAGAATCATGCATGTACTGTGATTTAGCATCAGTAAGTTTTCTGGAATTATCAGCCAGCATCCTCTAACAAACTCACGAAATGCCAGA--CTCCTCTGACTCTCTTTTTTAATACAGTGAGAACCAGAGTCAGGAACAGACAAGCAGTGCTGCTTCGAGCAACCTGCCTCTGGTGAAGTTGACCGTACGGAGTCTCAAAGTTCAAAAGGTGACGGGGAGGTTGATACTGTGAAATCCAGATGCTTGCAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAAGACCCTTTCATAAAAAGCAGAACTCCATTTATTCTTTCTTAGAAAAGGGAGCTGGAGG-AAGCGGTGTTAAACACCATCCCTGGAAATGCAGCAGAAAC-CACTGGAAAGCACAGAGCTTGCCTTTGGAGGCCTCAGCCAGAACCAGCTGAACTGAGATGCACTCAAGGTGCCTCAAGCTCAAGATTCTGCCTCTCTTAAAAGGTCTGTGGGAGCCGCCTTCTCTACCTTTCCC-ATTATCCTTACCTCTTTCTAGGAAAAAAGAAGAGAAAAACTCTTAAACTCATTCTCCTA---TTCTCCCCTGCTATGGATAAAACCATTTAGAATTTGGCCTAGTCTCCACTGAATACGTGGCTTGCCATCTTTTGGGAATGGCCCCTTTGTGATCATGACCCCAAACTTCT--GTTTTTTTAGTCAGCTAAAGTTCTCCCTCAAAGCAAAAGCAAAA-------GCAAAATCCTCCCTGCCCCCATTCCCTAGAACTGTGAAAGCCC-GCATCCCATTCCCCGCTCCTCTAACTAAAATATTTATATACATACAACAAAAATTGTCTTAA---CAGCAACAAACCAAACTTTGGCTTGGGGTGGGGGG-ACCCTTAAAAATGGCCAGTGGAC-TGGGCA-GTTGGTGTCCCCTTATTCTCTGTCTTCCTCCCCAGAGTCAGTAATAATTGCATCGAGGCCTCTAGCTTCCTTG---------ACATCGCCCCTAGTTTCAGGCACAGCCTCTCTCCCAGTTACGAGGCGAGACAGGATTC--------TGAAGGGGGAAAGGATATGTATTCTACACAACAGGTCAACGCCCTCTCAGATATATCACTCTGCTTAC-AAAGAATGCTTGATGCTGTCATAGGTCAGTCATTTTAATTCAGGGACATGAGTCAGTTATCAGTCAAGAACATGTGTGGAGGCAGGAGTT-----------------------------------------------------------------aaaaacaaacccaaaacaaacccat----aaccagaaGCTCCATGTCTCTGAATTACTCCCTTTAGCAGCTGTCCCTTGGGTGAAAGGTCACCCTAGTACCAATGTGACTAGACCAGGGAGCCAAAAAGACCGTGCTTTTCTATTTCCTAATGCCTTCATTTGGGAAATGCTGTAGGACACTTGCTTTTATCAGTTCTATCTAACAGCTAGAAGAGAAACAC--TCCCTCCTACCTTGATAACATAGAAAATTACAGCCAGATGGCAACGGCAGTGACT------------CACTG-CGCGACTCTTTCTGGTGATATAGAAGACCCTTGCCATCGCAGACCCTCCTTCCAATATGGGAGGGCAGCAATCTCAGGGCCTCTGCATTTTATGTCCTGTAGTGTTAATGTGTACAAAGTGGTCCGGGTGCTCAGCGGGGTGTTTTTGGAGGACAGTGAGAAGCTCAGCGGGATAGCCACA----GGCTCAAGACTGTGGATAGAGAAGTGACTCATA-AAGGCTCTGGAAGATGAAAATTCCTATGGCTTTGGAGC----AAGTACAAAGTGCCTCTGCCTGCCCTTCCATGTCCTC-----ATCACCA-AAACTTCCAGGGACTACTGACCTA-GGACCTGGTACTCTATCTTTCCCCAGCAGATTCTTTATTCTATTTTTTAAACTTTGT----ACTTTCTGAGGCAAGAAAA----AAGTAAGAAATACCAG-----------------ATCTTCTAATA--TTCCTTTTCCCTTCCTCACCCTCTTTAATGGCTGTCAACAATTTGTACTTCTAATCCTCA----------AGACATCT-GGGGGAAATCTGGTCACTGGCTTATTCACTTTTCTGTCCCTGGGTCCTAAATTCCTGAATCTTATGGACATGAGAGCAGGGTGTTAATAAAAGAATACATGAGCTAAGCTGTGGTTCAATTAAAGGAGAAGAAGCCTAGAAGGAATGCT-AGGTTACAGGAACAAAAAGAAATGATCTTTTTCATACTCCAGAGTTCATTCTGAGATCGGTTTCCTAATGAGGTGT---TTATTATCCACTGTCTGAGAGCACGTTTGGAAATATCAATACTATAATTCCAAAAACTATGCC-AGCTGTCTCAGGCTGTGCGTGTAAGATGATTGTAAAAAGAACGGAGAAGACAGGAGGGAAGAGGAGAGGAAAGCGTCTTTTTAATTCTCCTGCTTTGTAAGCACAAATTCCT---ATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTC-AAAGACCAGAAACTCAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGT-CCCCCAGTCATTCAGCACCAGATACACTTTGGTAATTCTGTCTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAAT s panTro4.chr22 34437368 5128 + 49737984 TAATACACACAGCCC--AAAGAATGGTGTTTCTCTCTTTTATTTAAAAACAGTGCTTCATTACCATGTGCAAAGGCTGAGGCAGTGCTCCTCCTTCGCTTAGAGTTTATAAAAGCCAGCAACATGATCAATAATTTATACACATGGAGAGTAATACAAAAAAATAAGGAATAAAAGCTAAAGATCTAACTACTCCGACCTTCACAATTCCAGCTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAAGCTACTATACAATATGATTCTTAACGAGAA--------------GGGAAGGGAATTAGAGACTGTCACAAAGCCCTGGGATGCTTCTCTGGAGTTAGCAGGGAAACAGGACCCTGGGCAAGCAGCTCGGGTGTCCTAGGAAGTGATTCTGGGGGAGGA---CGGGAGGGGA-GAGAGAAGGCTAGGTGGTCGATTACACAAGCATCC-CATGTAATGCCCCCATGCCCC-AAAGGTACCTGTTTTGCCATGGCAATGGGA---GGGGCTGGAGGAACAGCATGTTGCATGTAGGGATGGTCCGGTCCCTGCCATGG----GGAGTGGGGAGAAGAGGAGAGGTTCTGTGGCA-TTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGGTCAGCCTGTCAGGGACAAGTACACTCCACCGGCTCTCTTCTCGCTTTGCAGCCCTAGCTTACGCGTGTCAGCCCCAGGTTTGCTCCAGCTATTCACAAGCAGAA-TA-TAACACAAG--AAAAACAATTCATATCCCTTAGGG-AAAAAAGAGGATCAATTCATCACTCGATATATAATACAGCCAAAATGAGCTGCCAAAACAAGCACACACAC--------AAATACTGTGAACAGAAAAATACAAGAAAATGACTAAGCTGGG--AGTCTTGACGGGG-TATGGACATTGCTTAAAGCAC-TTATCAGTCCCCGGAAAAACCAAACCAAAAAACATTTTTTAAAAATTCA-GAAACTCATGTACCCCCTGGGAAACTGGTGTTGGTAACAAAGGGCAGGGCGT--------GGGGAGAGAAAAGAGAATCACTGTTCCCTTTTTGCTCGCCAGTGTGAGTGGAGTC---CTCAGGTCACCGGCATGTACACAAGTACCAGACAA--GGAG--GACCAAGTCCCTCTGCTGGTGGCCTCCTAAAAGGCAAGGCTTGAGTTTTGGCTGATGAGCAGTTCTCTCCGTTACCAATCCCTGCCAACCAGCACTACCATGGCTGAATTGATCTACCG--TTTTCCTGAGTAAACTGTAACTGGCTACAGTTTCGGTAACATGGAAAAGAACTCAGCTACTACAGCCAACTGCAAT--ACTTCAGGAACCCCCTCCATCCCTGGGC---TCCTCACTCCTAGTGCATCTGATTGAGGAATCTGATAACTTGCTGCAGTCTGGTCTGTAAGCCTCATTTGCAAAGAAAGGTGCC-AGGGACTCTATTACACTCACTAAACCAGAGGGCACACGCTGGCTTAGGACACCCAGAGCCTACTTGGAA-AGGGCCCTGTTTCATGCTCTAGCTCTTGGATGGCTATTGCCTGGCTGATCAGTAAAGCAAGTATGAAGGAAGTACATAGGA-AAAGGAAAGGGAGGGAAGAGGCTTTTGGACAGTAACATTTCCAAAA-------AAATATAGTGTTTTATGCAACA--GAGAATCAAGTTTCACT-GTGTATACTACAAATGGTCAAACATTTTCAAGAGCATGACAAAATAAAAACACACAAATTTACGTCTGATGTTCACCTTGCCCACTATTTTTTTT-CCTATCTTAAAACAGTGCAAACAGG-TAACTTATGCTTT-TAAAACACCACGACCCCTTCCCCAC-----CCCCCAAAGTCCCTTTCCTCCTAGTATCTGGGGG----GAAATCTGCAATTCTGCAAATGTTACTGCGCTAGAGGGCTGCAAGCAGCAGAGAACTGGCTGAACTTGGCAAAAGGCGAGGACTCGTCAA--AGC--TTCCC-------CTTTCTCCTCCTTAAACATCTAAGTGCTTTCCAGTCTGTCCCTTGGTTGGCCTTGTTCTCCTGCCAGAGGGAAGGGGG----TTCATCATGCCCTTCTTGCATATCCTTGGGGTTGCTTCCATCCCTGTTTGAT----GTCTCCCTCATGTCTGGAAGCTATGTAACTAGTTACAGGATGGTAGTGATTAACCCACTTATCTGCTAGATCTCTAGTAAAGCATAATGCTAAGCTA-AGAGCAGTTCAGCCCCTGAGGAGTCACACATTTGAGGAAAAGCTGCTATCGATGACTTCTATTATCTAGATTTCCACTAGCTCCCCTCAGACTAAAAGTTGTGCCCCAGTCCACTTCTTTCTCAAAG--------------------AAAAAAAAAC---GTTGGCTCAATTCAGACTGTGGCTGTTGAAGGATGATGGTGATAGTAGGTTTTGTTAAACCTGAGAGCCTGACAAATGGTGAATCACAATGGCTGATCTGAGTTA--ATGGAAACTGAACT-AAGTGACATGAGGAATTCTGGAAAATGCCTATGGGCAGCTCTCTGGGCTCGAAGAGGGACATGGAGATAAAGGTGTTCACTAGAGGCCTCCTTTAAGGAGCCCAGCTTCCAAG------------AGTACAGAAAGTCCAGGTCATGAAC----TATAGTAAAGCTGAAAAAGAATCATGCATGTACTGTGATTTAGCATCAGTAAGTTTTCTGGAATTATCAGCCAGCATCCTCTAACAAACTCACGAAATGCCAGA--CTCCTCTGACTCTCTTTCTTAATACAGTGAGAACCAGAGTCAGGAACAGACAAGCAGTGCTGCTTCGAGCAACCTGCCTCTGGTGAAGTTGACTGTACGGAGTCTCAAAGTTCAAAAGGTGACGGGGAGGTTGATACTGTGAAATCCAGATGCTTGTAAGAGCCCCAATTCTTAGTGTTGACACTGAAAACCAAAGACCCTTTCATAAAAAGCAGAACTCCATTTATTCTTTCTTAGAAAAGGGAGCTGGAGGGAAGTGGTGTTAAACACCATCCCTGGAAATGCAGCAGAAAC-CACTGGAAAGCACAGAGCTTGCCTTTGGAGGCCTCAGCCAGAACCAGCTGAACTGAGATGCACTCAAGGTGCCTCAAGCTCAAGATTCTGCCTCTCTTAAAAGGTCTGTGGGAGCCGCCTTCTCTACCTTTCCC-ATTATCCTTACCTCTTTCTAGGAAAAAAGAAGAGAAAAACTCTTAAACTCATTCTCCTA---TTCTCCCCTGCTATGGATAAAACCATTTAGAATTTGGCCTAGTCTCCACTGAATACGTGGCTTGCCATCTTTTGGGAATGGCCCCTTTGTGATCATGACCCCAAACTTCT--GTTTTTTTAGTCAGCTAAAGTTCTCCCTCAAAGCAAAAGCAAAA-------------TCCTCCCTGCCCCCATTCCCTAGAACTGTGAAAGCCC-GCATCCCATTCCCCGCTCCTCTAACTAAAATATTTATATACATACAACAAAAATTGTCTTAA---CAGCAACAAACCAAACTTTGGCTTGGGGTGGGGGGGACCCTTAAAAATGGCCAGTGGAC-TGGGCA-GTTGGTGTCCCCTTATTCTCTGTCTTCCTCCCCAGAGTCAGTAATAATTGCATCGAGGCCTCTAGCTTCCTTG---------ACATCGCCCCTAGTTTCAGGCACAGCCTCTCTCCCAGTTACGAGGCGAGACAGGATTC--------TGAAGGGGGAAAGGATATGTATTCTACACAACAGGTCAACGCCCTCTCAGATATATCACTCTGCTTAC-AAAGAATGCTTGATGCTGTCATAGGTCAGTCATTTTAATTCAGGGACATGAGTCAGTTATCAGTCAAGAACATGTGTGGAGGCAGGAGTT-----------------------------------------------------------------AAAAACAAACCCAAAACAAACCCAT----AACCAGAAGCTCCATGTCTCTGAATTACTCCCTTTAGCAGCTGTCCCTTGGGTGAAAGGTCACCCTAGTACCAATGTGAATAGACCAGGGAGCCAAAAAGACCGTGCTTTTCTATTTCCTAATGCCTTCATTTGGGAAATGCTGTAGGACACTTGCTTTTATCAGTTCTATCTAACAGCTAGAAGAGAAACAC--TCTCTCCTACCTTGATAACATAGAAAGTTACAGCCAGATGGCAATGGCAGTGACT------------CACTG-CGCGACTCTTTCTGGTGATATAGAAGACCCTTGCCATTTCAGACCCTCCTTCCAATATGGGAGGGCAGCAATCTCAGGGCCTCTGCATTTTATGTCCTGTAGTGTTAATGTATACAAAGTGGTCCGGGTGCTCAGCTGGGTGTTTTTGGAGGACAGTGAGAAGCTCAGCGGGATAGCCACA----GGCTCAAGACTGTGGATAGAGAAGTGACTCATG-AAGGCTCTGGAAGATGAAAATTCCTATGGCTTTGGAGC----AAGTACAAAGTGCCTCTGCCTGCCCTTCCATGTCCTC-----ATCACCA-AAACTTCCAGGGACTACTGACCTA-GGACCTGGTACTCTATCTTTCCCCAGCAGATTCTTTATTCTATTTTTTAAACTTTGT--------TCTGAGGCAAGAAAA----AAGTAAGAAATACCAG-----------------ATCTTCTAATA--TTCCTTTTCCCTTCCTCACCCTCTTTAATGGCTGTGAACAATTTGTACTTCTAATCCTCA----------AGACATCT-GGGGGAAATCTGGTCACTGGCTTATTCATTTTTCTGTCCCTGGGTCCTAAATTCCTGAATCTTATGGACATGAGAGCAGGGTGTTAATAAAAGAATACATGAGCTAAGCTGTGGTTCAATTAAAGGAGAAGAAGCCTAGAAGGAATGCT-AGGTTACAGGAACAAAAAGAAATGATCTTTTTCATACTCCAGAGTTCATTCTGAGATCGGTTTCCTAATGAGGTGT---TTATTATCCACTGTCTGAGAGCACGTTTGGAAATATCAATACTATAATTCCAAAAACTATGCC-AGCTGTCTCAGGCTGTGCGTGTAAGATGATTGTAaaaagaatggagaagacaggagggaagaggagaggaaagCGTCTTTTTAATTCTCCTGCTTTGTAAGCACAAATTCCT---ATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTC-AAAGACCAGAAACTCAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGT-CCCCCAGTCATTCAGCACCAGATACACTTTGGTAATTCTGTCTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30853505 5151 + 46535552 TAATACACACAGGCC--AAAGAATGGTGTTTCTCTCTTTTATTTAAAAACAGTGCTTCATTACCATGTGCAAAGGCTGAGGCAGTGCTCCTCCTTTGCTTAGAGTTTATAAAAGCCAGCAACATGATCAATAATTTATACACATGGAGAGTAATACAAAAAAATAAGGAATAAAAGCTAAAGATCTAACTACTCCGACCTTCACAATTCCAGCTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAAGCTACTATACAATATGATTCTTAACGAGAA--------------GGGAAGGGAATTAGAGACTGTCACAAAGCCCTGGGATGCTTCTCTGGAGTTAGCAGGGAAACAGGACCCTGGGCAAGCAGCTCGGGTGTCCTAGGAAGTGATTCTGGGGGAGGA---CGGGAGGGGA-GAGAGAAGGCTAGGTGGTCGATTACACAAGCATCC-CATGTAATGCCTCCATGCCCC-AAAGGTACCTGTTTCGCCACGGCAATGGGA---GGGGCTGGAGGAACAGCATGTTGCATGTAGGGATGGTCCGGTCCCTGCCATGG----GGAGTGGGGAGAAGAGGAGAGGTTCTGTGGCA-TTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGGTCAGCCTGTCAGGGACAAGTACACTCCACCGGCTCTCTTCTCGCTTTGCAGCCCTAGCTTACGTGTGTCAGCCCCAGGTTTGCTCCAGCTATTCACAAGCAGAA-TA-TAACACAAG--AAAAACAATTCATATCCCTTAGGG-AAAAAAGAGGATCAATTCATCACTCGATATATAATACAGCCAAAATGAGCTGCCAAAACAAGCACACACAC--------AAATACTGTGAACAGAAAAATACAAGAAAATGACTAAGCTGGG--AGTCTTGACGGGG-TATGGACATTGCTTAAAGCAC-GTATCAGTCCCCGGAAAAACCAAACCAAAAAACATTTTTTAAAAATTCA-AAAACTCATGTACCCCCTGGGAAACTGGTGTTGGTAACAAAGGGCAGGGGGT--------GGGGAGAGAAAAGAGAATCACTGTTCCCTTTTTGCTCGCCAGTGTGAGTGGAGTC---CTCAGGTCACCGGCATGTACACAAGTACCAGACAA--GGAG--GACCAAGTCCCTCTGCTGGTGGCCTCCTAAAAGGCAAGGCTTGAGTTTTGGCTGATGAGCAGTTCTCTCCGTTACCAATCCCTGCCAACCAGCACTACCATGGCTGAACTGATCTACCG--TTTTCCTGAGTAAACTGTAACTGGCTACAGTTTCGGTAACATGGAAAAGAACTCAGCTACTACAGCCAACCGCAAT--ACTTCAGGAACCCCCTCCATCCCTGGGC---TCCTCACTCCTAGTGCATCTGATTGAGGAATCTGATAACTTGCTGCAGTCCGGTCTGTAAGCCTTATTTGCAAAGAAAGGTGCC-AGGGACTCTATTACACTCACTAAACCAGAGGGCACACGCTGGCTTAGGACACCCAGAGCCTACTTGGAA-AGGGCCCTGTTTCATGCTCTAGCTCTTGGATGGCTACTGCCTGGCTGATCAGTAAAGCAAGTATGAAGGAAGTACACAGGA-AAAGGAAAGGGAGGGAAGAGGCTTTTGGACAGTAACATTTCCAAAA-------AAATATAGTGTTTTATGCAACA--GAGAATCAAGTTTCACT-GTGTATACTACAAATGGTCAAACATTTTCAAGAGCATGACAAAATGAAAACACACAAATTTACGTCTGATGTTCACCTTGTCCACTATTTTTTT--CCTATCTTAAAACAGTGCAAACAGG-TAACTTATGCTTT-TAAAACACCATGACCCCTTCCCCAC-----CCCCCAAAGTCCCTTTCCTCCTAGTATCTGGGGG---AAAAATCTGCAATTCTGCAAATGTTACTGTGCTAGAGGGTTGCAAGCAGCAGAGAACTGGCTGAACTTGGCAAAAGGGGAGGACTTGTCAA--AGT--TTCCC-------CTTTCCCCTCCTTAAACATCTAAGTGCTTTCCAGTCTGTCCCTTGGTTGGCCTTGTTCTCCTGCCAGAGGGAAGGGGG----TTCATCATGCCCTTCTTGCATATCCTTGGGGTTGCTTCCATCCCTGTTTGAT----GTCTCCCTCATGTCTGGAAGCTATATAACTAGTTACAGGATGGTAGTGATTAACCCACTTATCTGCTAGATCTCTAGTAAAGTATAATTCTAAGCTA-AAAGCAGTTCAGCCCCTGAGGAGTCACACATTTGAGAAAAAGCTGCTATTGATGACTTCTGTTGTCTAGATTTCCACTAGCTCCCCTCAGACTAAAAGTTGTGCCCCAGTCCACTTCTTTCTCAAAG--------------------AAAAAAAAAAAAGGTTGGCTCAATTCAGACCGTGGCTGTTGGAGGATGACGGTGATAGTAGGTTTTGTTAAACCTGAGAGCCTGACAAATGGTGAATCACAATGGCTGATCTGAGTTA--ATGGAAATTGAACT-AAGTGACATGAGGAATTCTGGAAAATGCCTATGGGCAGCTCTCTGGGCTCAAAGAGGGACATGGAGATAAAGGTGTTCACTAGAGGCCTCCTTTAAGGAGCTCAGCTTCCAAG------------AGTACAGAAAGTCCAGGTCATGAAC----TATAGTAAAGATGAAAAAGAATCATGCATGTACTGTGATTTAGCATCAGTGAGTTTTCTGGAATTATCAGCCAGCATCCTCTAACAAACTCATGAAATGCCAGA--CTCCTCTGACTCTCTTTCTTGATACAGTGAGAACCAGAGTCAGGAACAGACAAGCAGTGCTGCTTCGAGCAACCTGCCTCTGGTGAATTTGACTGTATGGAGTCTCAAAGTTCAAAAGGTGACGGGGAGGTTGATACTGTGAAATCCAGATGCTTGTAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAAGACCCTTTCGTAAAAAGCAGAACTCCATTTATTCTTTCTTAGAAAAGGGAGCTGGAGG-AAGCGGTGTTAAACACCATCCCTGGAAATGCAGCAGAAAC-CACTGGAAAGCACAGAGCTTGCCTTTGGAGGCCTCAGCCAGAACCAGCTGAACTGAGATGCACTCAAGGTGCCTCAAGCTCAAGATTCTGCCTCTCTTAAAAGGTCTGTGGGAGCTGCCTTCTCTACCTTTCCC-ATTATCCTTACCTCTTTCTAGGAAAAAAGAAGAGAAAAACTCTTAAACTCATTCTCCTA---TTCTCCCCTGCTATGGATACAACCATTTAGAATTTGGCGTAGTCTCCACTGAGTACGTGGCTTGCCATCTTTTGGGAATGGCCCCTTTGTGATCATGACCCCAAACTTCT--GTTTTTTTAGTCAGCTAAAGTTCTCCCTCaaagcaaaagcaaaagcaa-aagcaaaaTCCTCCCTGCCCCCATTCCCTAGAACTGTGAGAGCCC-GCATCCCATTCCCCGCTCCTCTAACTAAAATATTTATATACATACAACAAAAATTGTCTTAA---CAGCAACAAACCAAACTTTGGCTTGGGGTGGGGGG-ACCCTTATAAATGGCCAATGGAC-TGGGCA-GTTCGTGTCCCCTTATTCTCTGTCTTCCTCCCCAGAATCAGTAATAATTGCATCGAGGCCTCTAGCTTCCTTG---------ACATCGCCCCTAGTTTCAGGCACAGCCTCTCTCCCAGTTATGAGGCGAGACAGGATTC--------TGAAGGGGGAAAGGATATGTATTCTACACGACAGGTCAACGTCCTCTCAGATATATCACTCTGCTTAC-AAAGAATGCTTGATGCTGTCATAGGTCAGTCATTTTAATTCAGGGACATGAGTCAGTTATCAGTCAAGAACATGTGTGGAGGCAGGAGTT-----------------------------------------------------------------caaaacaaacccaaaacaaacccataacaaaccAGAAGCTCCATGTCTCTGAATTACTCCCTTTAGCAGCTGTCCCTTGGGTGAAAGGTCACCCTAGTACCAATGTGAATAGACCAGGGAGCCAAAAAGACCGTGCTTTTCTATTTCCTAATGCCTTCATTTGGGAAATGCTGTAGGACACTTGCTTTTATCAGTTCTATCTAACAGCTAGAAGAGAAACAC--TCTCTCCTACCTTGATAACATAGAAAATTACAGCCAGATGGCAACAGCAGTGACT------------CACTG-CGTGACTCTTTCTGGCGATATAGAAGACCCTTGCCATTTCAGACCCTCCTTCCAATACGGGGGGGCAGCAATCTCAGGGCCTCTACATTTTATGTCGTGTAGTGTTAATGTATACAAAGTGGTCCGAGTGCTCAGCTGGGTGTTTTTCGAGGACAGTGAGAAGCTCAGCGGGATAGCCACA----GGCTCAAGACTGTGGATAGAGAAGTGACTCATA-AAGGCTCTGGAAGATGAAAATTCCTATGGCTTTGGAGC----AAGTGCAAAGTGCCTCTGCCTGCCCTTCCATGTCCTC-----ATCACCA-AAACTTCCAGAGACTACTGACCTA-GGACCTGGTACTCTATCTTTCCCCAGCAGATTCTTTATTCTATTTTTTAAACTTT-T----ACTTTCTGAGGCAAGAAAA----AAGTAAGAAATACCAG-----------------ATCTTCTAATA--TTCCTTTTCCCTTCCTCACCCTCTTTAATGGCTGTGAACGATTTGTACTTCTAATCCTCA----------AGACATCT-GGGGGAAATCTGGTCACTGGCTTATTCATTTTTCTGTCCCTGGGTCCTAAATTCCTGAATCTTATGGACATGAGAGCAGGGTGTTAATAAAAGAATACATGAGCTAAGCTGTGGTTCAATTAAAGGAGAAGAAGCCTAGAAGGAATGCT-AGGTTACAGGAACAAAAAGAAATGATCTTTTTCATACTCCAGAGTTCATTCTGAGATCGGTTTCCTAATGAGGTGTTTATTATTATCCACAGTCTGAGAGCACGTTTGGAAATATCAATACTATAATTCCAAAAACTATGCC-AACTGTCTCAGGCTGTGCGTGTAAGATGATTGTAaaaagaatggagaagacaggagggaagaggagaggaaagCGTCTTTTTAATTCTCCTGCTTCGTAAGCACAAATTCCT---ATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTC-AAAGACCAGAAACTCAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGT-CCCCCAGCCATTCAGCACCAGATACACTTTGGTAATTCTGTCTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAAG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100405981 5115 - 115148730 TAATACACACAGGCCCAAAAGAATGGTGTTTCTCTCTTTTATTTAAAAACAGTGCTTCATTACCATGTGCAAAGGCAGAGGCAGGGCTCCTCCTTCGCTTAGAGTTTATAAAAGCCAGCAACATGATCAATAATTTATACACATGGAGAGTAATACAAAAAAATAAGGAATAAAAGCTAAAGATCTAACTACTCCGACCTTCACAATTCCAGCTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAAGCTACTATACAATATGATTCTTAACGAGAA--------------GGGAAGGGAATTAGAGACTGTCACAAAGCCCTGGGATGCTTCTCTGGAGTTAGCAGGGAAACAGGACCCTGGGCAAGCAGCTCGGGTGTCCTAGGAAGTGATTCTGGGGGAGGA---CGGGAGGGGA-GAGAGAAGGCTAGGTGGTCGATTACATAAGCATCC-CATGTAATGCCCCCATGCCCC-AAAGGTACCTGTTTTGCCATGGCAACGGGA---GGGGCTGGAGGAACAGCATGTTGCATGTAGGGATGGTCCAGTCCCTGCCATGG----GGAGTGGGGAGAAGAGGAGAGGTTCTGTGGCA-TTTTGAGCCTTGCAAAGATTTGGACTGGAAAGCTCAGAGACTCAGGTAGGTCAGCCTGTCAGGGACAAGTACACTCCACCGGCTCTCTTCTCGCTTTGCAGCCCTAGCTTACGTGTGTCAGCCCCAGGTTTGCTCCAGCTATTCACAAGCAGAA-TA-TAACACAAG--AAAAACAATTCATATCCCTTGGGG-AAAAAAGAGGATCA-------ACTCGATATATAATACAGCCAAAATGAGCTGCCAAAACAAGCACACACAC--------AAATACTGTGAACAGAAAAATACAAGAAAATGACTAAGCTGGG--AGTCTTGACGGGG-TATGGACATTGCTTAAAGCAC-TTATCAGTCCCCGGAAAAACCAAACCAAAACACATTTTTTAAAAATTCA-AAAACTCATGTACCCCCTGGGAAACTGGTGTTGGTAACAAAGGGCAGGGGGT---------GGGAGAGAAAAGAGAATCACTGTTCCCTTTTTGCTCGCCAGTGTGAGTGGAGTC---CTCAGGTCACCGGCACGTACACAAGTACCAGACAA--GGAG--GACCAAGTCCCTCTGCTGGTGGCCTCCTGAAAGGCAAGGCTTGAGTTTTGGCTGATGAGCAGTTCTCTCCGTTACCAATCTCTGCCAACCAGCACTACCATGGCTGAATTGATCTACCG--TTTTCCTGAGTAAACTGTAACTGGCTACAGTTTCGGTAACATGGAAAAGAACTCAGCTACTACAGCCAACTGCAAT--ACTTCAGGAACCCCCTCCATCCCTGGGC---TCCTCACTCCTAGTGCATCTGATTGAGGAATTTGATAACTTGCTGCGGTCTGGTCTGTAAGCCTTATTTGCAAAGAAAGGTGCC-AGGGACTCTGTTACACTCACTAAACCAGAGGGCACACGCTGGCTTAGGACACCCAGAGCCTACTTGGAA-GGGGCCCTGTTTCATGCTCTAGCTCTTGGATGGCTATTGCCTGGCTGATCAGTAAAGCAAGTATGAAGGAAGTACACAGGA-AAAGGAAAGGGAGGGAAGAGGCTTTTGGACAGTAACATTTCCAAAA-------AAATATAGTGTTTTATGCAACAGGGAGAATCAAGTTTCACT-GTGTATACTACAAATGGTCAAACATTTTCAAGAGCATGACAAAATAAAAACACACAAATTTACGTCCGACGTTCACCTTGCCCACTATTTTTTT--CCTATCTTAAAACAGTGCAAACAGG-TAACTTATGCTTT-TAAAACACCACGACCCCTTCCCCAC-----CCCCCAAAGTCCCTTTCCTCCTAGTATCTGGGGG---AAAAATCTGCAATTCTGCAAATGTTACTGTGCTAGAGGGTTGCAAGCAGCAGAGAACTGGCTGAACTTGGCAAAAGGGGAGGACCCGTC----AGT--TTCCC-------CGTTCCCCTCCTTAAACATCTAAGTGCTTTCCAGTCTGTCCCTTGGTTGGCCTTGTTCTCCTGCCAGAGGGAAGGGGG----TTCACCATGCCCTTCTTGCATATCCTTGGGGTTGCTTCCATCCCTGTTTGGT----GTCTCCCTCATGTCGGGAAGCTATATAACTAGTTACAGGATGGTAGTGATTAACCCACTTATCTGCTAGATCTCTAGTAAAGCATAATTCTAAGCTA-AGAGCAGTTCAGCCCCTGAGGAGTCACACATTTGAGGAAAAGCTGCTATCGATGACTTCTATTGTCTAGATTTCCACTAGCTCCCCTCAGACTAACAGTTGTGCCCCAGTCCA----TTTCTCAAAG--------------------AAAAAAAAAA--TGTTGGCTCAATTCAGACTGTGGCTGTTGGAGGATGATGGTGATAGTAGGTTTTGTTAAACCCGAGAGCCTGACAAATGGTGAATCACAATGGCTGATCTGAGTTA--ATGGAAATTGAACT-AAGTGACACAAGGAATTCTGGAAAATGCCTATGGGCAGCTCTCTGGGCTCGAAGAGCAACATGGAGATAAAGGTGTTCACTAGAGGCCTCCTTTAAGGAGCCCAGCTTCCAAG------------AGTACAGAAAGTACAGGTCATGAAC----TATAGTAAAGCTGAAAAAGAATCATGCATGTACTGTGATTTAGCATCAGTGAGTTTTCTGGAATTATCAGCCAGCATCCTCTAACAAACTCACGAAATGCCAGA--CTCCTCTGACTCTCTTTCTTAATACGGTGAGAACCAGAGTCAGAAACAGACAAGCAGTG--------------CTGCCTCTGGTGAAGTTGACTGTACGGAGTCTCAAAGTTCAAAAGGTGACGGGGAGGTTGATACTGTGAAATCTAGATGCTTGTAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAAGACCCTTTCATAAAAAGCAGAACTCCATTTATTCTTTCTTAGAAAAGGGAGCTGGAGG-AAGCGGTGTTAAACACCATCCCTGGAAATGCAGCAGAAAC-CACTGGGAAGCACAGAGCTTGCCTTTGGAGGCCTCAGCCAGAACCAGCTGAACTGAGATGCACTCAAGGTGCCTCAAGCTCAAGATTCTGCCTCTCTTAAAAGGTCTGTGGGAGATGCCTTCTCTACCTTTCCC-GTTATCCTTACCTCTTTCTAGGAAAAAAGAAGAGAAAAACTCGTAAACTCATTCTCCTA---TTCTCCCCTGCTATGGATACAACCATTTAGAATTTGGCCTAGTCTCCACTGAGTACGTGGCTTGCCATCTTTTGGGAATGGCCCCTTTGTGATCATGACCCCAAACTTCC--GTTTTTTTAGTCAGCTAAAGTTCTCCCTCAAAGCAAAAGCAAAA-------GCAAAATCCTCCCTGCCCCCATTCCCTAGAACTGTGAAAGCCC-GCATCCCATTCCCCGCTCCTCTAACTAAAATATTTATATACATACAACAAAAATTGTCTTAA---CAGCAACAAACCAAACTTTGGCTTGGGGTGGGGGG-ACCCTTAAAAATGGCCAATGGAC-TGGGCA-GTTGGAGTCCCCTTATTCTCTGTCTTCCTCCCCAGAATCAGCAATAATTGCATCGAGGCCTCTAGCTTCCTTG---------ACATCGCCCCTAGTTTCAGGCACAGCCTCTCTCCCAGTTATGAGGCGAGACAGGATTC--------TGAAGGGGGAAAGGATATGTATTCTACATGACAGGTCAACGCCCTCTCAGATATATCACTCTGCTTAC-AAAGAATGCTTGATGCTGTCATAGGTCAGTCATTTTAACTCAGGGACATGAGTCAGTTATCAGTCAAGAACATGTGTGGAGGCAGGAGTT-----------------------------------------------------------------AaaaacaaacccaaaacaaacccataacaaaccAGAAGCTCCATGTCTCTGAATTACTCCCTTTAGCAGCTGTCCCTTGGGTGAAAGGTCACCCTAGTACCAATGTGAATAGACCAGGGAGCCAAAAAGACCATGCTTTTCTATTTCCTAATGCCTTCATTTGGGAAATGCTGTAGGACACTTGCTTTTATCAGTTCTATCTAACAGCTAGAAGAGAAACAC--TCTCTCCTACCTTGATAACATAGAAAATTACAGCCAGATGGCAATGGCAGTGACT------------CACTG-CGTGACTCTTTCTGGCGATATAGAAGACCCTTGCCATTTCAGACCCTCCTTCCAATATGGGAAGGCAGCAATCTCAGGGCCTCTGCATTTTATGTCCTGTAGTGTTAATGTACACAAAGTGGTCTGGGTGCTCAGCTGGCTG-TTTTGGAGGACAGTGAGAAGCTCAGCGGGATAGCCACA----GGCTCAAGACTGTGGATAGAGAAGTGACTCATA-AAGGCTCTGGAAGATGAAAATTCCTATGGCTTTGGAGC----AAGTACAAAGTGCCTCTGCCTGCCCTTCCATGTCCTC-----ATCACCA-AAACTTCCAGGGACTACTGACCTA-GGACCTGGTACTCTATCTTTCCCCAGCAGATTCTTTATTCTATTTTTTAAACTTTGT----ACTTTCTGAGGCAAGAAAA----AAGTAAGAAATACCAG-----------------ATCTTCTAATA--TTCCTTTTCTCTTCCTCGCCCTCTTTAATGGCTGTGAACAATTTGTACTTCTAATCCTCA----------AGACATCT-GGGGGAAATCTGGCCACTGGCTTATTCATTTTTCTGTCCCTGGGTCCTAAATTCCTGAATCTTATCGACATGAGAGCAGGGTGTTAATAAAAGAATACATGAGCTAAGCTGTGGTTCAATTAAAGGAGAAGAAGCCTAGAAGGAATGCT-AGGTTACAGGAAC-AATAGAAATGATCTTTTTCATACTCCAGAGTTCATTCTGAGATCGGTTTCCTAATGAGGTGT---TTATTATCCACAGTCTGAGAGCACGTTTGGAAATATCAATACTATAATTCCAAAAACTATGCC-AACTGTCTCAGGCTGTGCGTGTAAGATGATTGTAAAAAGAATGGAGAAGACAGGAGGGAAGAGGAGAGGAAAGCGTCTTTTTAATTCTCCTGCTTTATAAGCACAAATTCCT---ATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTC-AAAGACCAGAAACTCAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGT-CCCCCAGCCATTCAGCACCAGATACACTTTGGTAATTCTGTCTGCTGATCTCTGATCAGATGCATTTATCGGCTCCTAAT i nomLeu3.chr7b M 100 C 0 s rheMac3.chr10 80553737 5147 + 95678458 TAATACACACAGGCC--AAAGAATGGTGTTTCTCTCTTTTATTTAAAAACAGTGCTTCATTACCATGTGCAAAGGCTGAGGCAGTGCTCCTCCTTCGCTTAGAGTTTATAAAAGCCAGCAACATGATCAATAATTTATACACATGGAGAGTAATACAAAAAAATAAGGAATAAAAGCTAAAGATCTAACTACTCCGACCTTCACAATTCCAGCTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAAGCTACTATACAATATGATTCTTAATGAGAA--------------GGGAAGGGAATTAGAGACTGTCACAAAGCCCTGGGATGCTTCTCTGGAGTTAGCAGGGAAACAGGACCCTGGGCAAGCAGCTCGGGTGTCCTAGGAAGTGATTCTGGGGGAGGC---CGGGAGGGGA-CAGAGAAGGCTGGGTGGTCGATTACACAAGCATCC-CATGTAATGCCCCCCTGCCCC--AAGGTACCTGTTTTGCCATGGCAGTGGGA---GGGGCTGGAGGAACAGCATGTTGCATGTAGGGATGGCCTGGTTCCTGCCATGGGGAAGGAGTGGGGAGAAGAGGAGAGATTCTGTGGCA-TTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGCAGGTCAGCCTGTCAGGGACAAGTACACTCCACCGGCTCTCTTCTCGCTTTGCAGCCCTAGTTTACGTGTGTCAGCCCCAGGTTTGCTCCAGCTATTCACAAGCAGAA-TA-TAACACAAG--AAAAACAATTCATATCCCTTAGGGAAAAAAAGAGGATCAATTCATCACTCGATATATAATACAGCCAAAATGAGCTGCCAAAACAAGCACACACAC--------AAATACTGTGAACAGAAAAATACAAGAAAATGACTAAGCTGGG--AGTCTTGACGGGT-TATGGACATTGCTTAAAGCAC-TTATCAGTCCCTGGAAAAACCAAACCAAAACACATGTTTTAAAAATTCA-AAAACTCATGTACCCCCTGGGAAACTGGTGTTGGTGACAAAGGGCAGGGGGT--------GGGGAGAGAAAAGAGAATCACTGTTCCCTTCTTGCTCGCCAGTGTGAGTGCAGTC---CTCAGGTCGCTGGCATGGACGCAAGTGCCAGACAA--GGAG--GACCAAGTCCCTCTGCCAGTGGCCTCCTAAAAGGCAAGGCTTGAGTTTTGGCTGCTAAGCAGTTCTCTCCGTTACCAATCCCTGCCGACCAGCACTACCATGGCTGAATTGATCTACCG--TTTTCCTGAGTAAACTGTAACTGGCTACAGTTTCGGTAACATGGAAAAGAACTCAGCTACCACAGCCAACTGCAAC--ACTTCAGGAATCCCCTCCATCCCTGGGC---TCCTCACTCCTAGTGCATCCGATCGAGGAATTTGACAACTTGCTGCAGTCTGGTCTGTAAGCCTTGTTTGCAAAGAAAGGTGCC-AGGGACTCTACTACGCTCACCGAACCAGAGGGCACACGCTGGCTTAGGACACCCAGAGCCTACTTGGAA-AGGGCCCTGTTTCATGCTCTAGCTCTTGGATGGCTATTGCCTGGCCGATCAGTAAAGCAAGTATGAAGGAAGTACACAGGA-AAAGGAAAGGGAGGGAAGAGGCTTTTGGACAGTAACATTTCCAAAA-------AAATATAGTGTTTTATGCAACA--GAGAATCAAGTTTCACT-GTGTATACTACAAATGGTCAAACATTTTCAAGAGCATGACAAAATAAAAACACACAAATTTACGTCTGATGTTCACCTTGCCCACTATTTTTTT--CCTATCTTAAAACAGTGCAAACAGG-TAACTTATGCTTT-TAAAACACCACGACCCCTTCCCCAC-----CCCCCAAAGTCCCTTTCCTCCTAGTATCTGGGGG--AAAAAATCTGCAATTCTGCAAATGTCACTGTGCTAGAGGGTTGCAAGCAGCAGAGAACTGGCTGAGCTTGGCAGAAGGGGAGGGCTCGCCAA--AGC--TTCCC-------CTTTTCCCTCCTTAAACATCTAAGCGCTTTCCAGTCTGTCCCTTGGTTGGCCTTGTTCTCCTGCCAGAGGGAAGGGGG----CTCATCATGCCCTTCTTGCATATCCTTGGGGTTGCTTCCGTCCCTGTTTGGTATCAGTCTCCCTCATGTCTGGAAGCTATGTAACTAGTCACGGGATGGTAGTGATTAACACACTTCTCTGCTGGATCTCTAGTAAAGCATAATTCTAAGCTA-AGAGCAGTTCAGCCCCTGAGGAGTCACACATTTGAGGAAAAGCTGCTATCGATGATTTCGATCGTCTAGATTTCCACTAGCTCCCCTCAGACTAAAAGTTGTGCCCCAGTCCACTTCTTTCTCAAAG--------------------AAAAAAAAAAAATGTTGGCTCAATTCAGACTGTGGCTGTTGGAGGATGATGGTGGTAGTAGGTTTTGTGAAACCCGAGAGGCTGACAAATGGTGAATCACAACGGCTGATCTGAGTTA--ATGGAAATTGAACT-AAGAGACACAAGGAATTCTGGAAAATGCCTTTGGGCAGCTCTCTGGGCTAAAAGAGGGACGTGGAGATAAAGGTTTTCACTAGAGGTCTCCTTTAAGGAGCCCAGCTTCCAAG------------AGTACAGAAAGTCCAGGTCATGAAC----TATAGTAAAGTTGAGAAAGAATCATGCA-----TGTGATTCAGCATCGGTGAGTTTTCCGGAATTATCAGCCAGCATCCTCTAACAAACTCACGAAATGCCAGA--CTCCTCTGACTCTC----TCAATACAGTGAGAACCAGAATCAGGAACAGACAAGCAGTGCTGCTTTGAGCAACCTGCCTCTGGTGAAGTTGAC---------TCTCAAAGTTCAAATGGTGATGGCGAGGTTGATGCTGTGACATCTAGATGCTTGTAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAAGACCCTTTCATAAAAAGCAGAACTCCATCTATTCTTTCTTAGAAAAGGGAGCTGGAGG-AAGCGGGGTCAAACACCATCCCTGGAAATGCAGCACAAAC-CACTGGAAAGCACAGAGCTTGCCTTTGGAGGCCTCAGCCAGAACCAGCTGAACTGAGATGCACTCAAGGTGCCTCAAGCTCAAGATTCTGCCTCTCTTAAAAGGTCTGTGGGAGCTGCCTTCTCTACCTTTCCT-ATTATCCTTACCTCCTTCTAGGAAAAAAGAAGAGAAAAACACTTAAACTCATTCTCCTA---TTCTCCCCTGCTAGGGATACAACCATTTAGAATTTGGCCTAGTCTCCATTGAGTACGTGGCTTGCCATCTTTTGGGAATGGCCCCTTTGTGATCATGACCTCAAACTTTT--GTTTTTTCAGTCAGCTAAAGTTCTCCCTCAAAGCAAAAGCAAAA-------GCAAAATCCTCCCTGCCCCCATTCCCTAGAACTGTGAAAGCCC-GCATCCCATTCCCCACTCCTCTAACTAAAATATTTATATACATACAACAAAAATTGTCTTAA---CAGCAACAAACCAAACTTTGGCTTGGGGTGGGGGG-ATCCTTAAAAATGCCCAATGGAC-TGGGCC-GTTGGTGTCCCCTTAGTCTCCGTCCTCCTCCCCAGGATGAGTAATAATTGCATCGAGGCCTCTAGCTTCCTTG---------ACATCACCCCTAGTTTCAGGCACAGCCTCTCTCCCAGTTATGAGGCGAGACAGGATTC--------CGAAGGGGGAGAGGATATGTATTCTACGCGACAGGCCAATGCCCTCTCAGACGCATCACTCTGCTTAC-AAAGAATGCTTGATGCTGTCGTAGGTCAGTCATTTTAATTCAGGGACATGAGTCAGTTATCAGTCAAGAACATGTGTGGAGGCAGGAGTT----------------------------------------------------------------AAaaaacaaacccaaaacaaacccataacaaaccAGAAGCTCCATGTCTCTGAATTACTCCCTTTAGCAGCTGTCCCTTGGGTGAAAGGTCACCCTAGTACCAATGTGAATAGACCAGGGAGCCAAAAAGACCGTGCTTTTCTATTTCCTAATGCCTTCATTTGGGAAATGCTGTAGGACACTTGCTTTGATCAGTTCTATCTAATAGCTAGAAGAGAAACTC--TCTCTCCTACGTTGATAACACAGAAAATTACAGCCAGATGGCAACGGCAGTGACT------------CACTG-CATGACTCTTCCTGGCGATACAGAAGACCCTTGCCATTTCAGACCCTCCTTCCAATATGGGAGGGCAGCAATCTCAGGGCCTCCGCGTTTTATGTCCTGTAGTGTTAATGTACACAAAGTGGTCCGGGTGCTCAGCTGGGTGTTTTTGGAGGACAGTGAGAAGCTTGGCAGGACAGCCACA---GGGCTCAAGACTGTGGATAGAGAAGTGACTCATA-AAGGCTCTGGAAGATGAAAATTCCTATGGCTTTGGAGC----AAGTACAAAGTGCCTCTGCCTGCCCTTCCATGTCCTC-----ATCACCA-AAACTTCCAGGGACTGCTGACCTA-GGACCTGGTACTCTATCTTTCCCCAGCAGATTCTTTATGCTGTTTTTTAAACTTTGT----ACTTTCTAAGGCAAGAAAA----AAGTAAGAAATACCAG-----------------ATCTTCTAATA--CTCCTTTTCTCTTCCTCACCCTCTTTAATGGCTGTGAACACTTTGTACTTCTAATCCTCAAGCGGTGCCCAGACATCT-GGGGGAAATCTGGTCACTGGCTTATTCATCTTTCTGTCCCTGGGTCCTGAATTCCTGAATCTTATGGACATGAGAGCAGGATGTTAATAAAAGAATACATGAGCTAAGCTGTGGTTCAATTAAAGGAGAAGAAGCCCAGAAAGAATGCT-AAGTTGCAGGAACAAAAAGAAATGATCTTTTTCATACTCCAGAGTTCACTCCGAGATCGGTTTCCTAATGAGGTGT---TTATTATCCACAGTCTGAGAGCACGTTTGGAAATATCAATACTATAATTCCAAAAACGATGCC-AACTGTCTCAGGCTGTGCGTGTAAGATGATTGTAaaaagaatggagaagacaggagggaagaggagaggaaagCGTCTTTTTAATTCTCCTGCTTTATAAGCACAAATTCCT---ATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAACTGCCTGTCAAAAGACCAGAAACTCAGAAGACGAGAAGAACATCCTGTTGCGGAAAGATCTCTCCCACTTCTGCTTGT-CCCCCAGCCATTCAGCACCAGGTACACTTTGGTAATTCTGTCTGCTGATTTCTGATCAGATGCATTGATCAGCTCCTAAT i rheMac3.chr10 C 0 I 11 s macFas5.chr10 80980578 5140 - 96509753 TAATACACACAGGCC--AAAGAATGGTGTTTCTCTCTTTTATTTAAAAACAGTGCTTCATTACCATGTGCAAAGGCTGAGGCAGTGCTCCTCCTTCGCTTAGAGTTTATAAAAGCCAGCAACATGATCAATAATTTATACACATGGAGAGTAATACAAAAAAATAAGGAATAAAAGCTAAAGATCTAACTACTCCGACCTTCACAATTCCAGCTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAAGCTACTATACAATATGATTCTTAACGAGAA--------------GGGAAGGGAATTAGAGACTGTCACAAAGCCCTGGTATGCTTCTCTGAAGTTAGCAGGGAAACAGGACCCTGGGCAAGCAGCTCGGGTGTCCTAGGAAGTGATTCTGGGGGAGGC---CGGGAGGGGA-CAGAGAAGGCTGGGTGGTCGATTACACAAGCATCC-CATGTAATGCCCCCCTGCCCC--AAGGTACCTGTTTTGCCATGGCAGTGGGA---GGGGCTGGAGGAACAGCATGTTGCATGTAGGGATGGTCCGGTTCCTGCCATGGGGAAGGAGTGGGGAGAAGAGGAGAGATTCTGTGGCA-TTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGCAGGTCAGCCTGTCAGGGACAAGTACACTCCACCGGCTCTCTTCTCGCTTTGCAGCCCTAGTTTACGTGTGTCAGCCCCAGGTTTGCTCCAGCTATTCACAAGCAGAA-TA-TAACACAAG--AAAAACAATTCATATCCCTTAGGGAAAAAAAGAGGATCAATTCATCACTCGATATATAATACAGCCAAAATGAGCTGCCAAAACAAGCACACACAC--------AAATACTGTGAACAGAAAAATACAAGAAAATGACTAAGCTGGG--AGTCTTGACGGGT-TATGGACATTGCTTAAAGCAC-TTATCAGTCCCCGGAAAAACCAAACCAAAACACATGTTTTAAAAATTCA-AAAACTCATGTACCCCCTGGGAAACTGGTGTTGGTGACAAAGGGCAGGGGGT--------GGGGAGAGAAAAGAGAATCACTGTTCCCTTCTTGCTCGCCAGTGTGAGTGCAGTC---CTCAGGTCGCTGGCATGGACGCAAGTGCCAGACAA--GGAG--GACCAAGTCCCTCTGCCGGTGGCCTCCTAAAAGGCAAGGCTTGAGTTTTGGCTGCTAAGCAGTTCTCTCCGTTACCAATCCCTGCCGACCAGCACTACCATGGCTGAATTGATCTACCG--TTTTCCTGAGTAAACTGTAACTGGCTACAGTTTCGGTAACATGGAAAAGAACTCAGCTACCACAGCCAACTGCAAC--ACTTCAGGAATCCCCTCCATCCCTGGGC---TCCTCACTCCTAGTGCATCCCATCGAGGAATTTGACACCTTGCTGCAGTCTGGTCTGTAAGCCTTGTTTGCAAAGAAAGGTGCC-AGGGACTCTACTACGCTCACCGAACCAGAGGGCACACGCTGGCTTAGGACACCCAGAGCCTACTTGGAA-AGGGCCCTGTTTCATGCTCTAGCTCTTGGATGGCTCTTGCCTGGCCGATCAGTAAAGCAAGTATGAAGGAAGTACACAGGA-AAAGGAAAGGGAGGGAAGAGGCTTTTGGACAGTAACATTTCCAAAA-------AAATATAGTGTTTTATGCAACA--GAGAATCAAGTTTCACT-GTGTATACTACAAATGGTCAAACATTTTCAAGAGCATGACAAAATAAAAACACACAAATTTACGTCTGATGTTCACCTTGCCCACTATTTTTTT--CCTATCTTAAAACAGTGCAAACAGG-TAACTTATGCTTT-TAAAACACCACGACCCCTTCCCCAC-----CCCCCAAAGTCCCTTTCCTCCTAGTATCTGGGGG--AAAAAATCTGCAATTCTGCAAATGTCACTGTGCTAGAGGGTTGCAAGCAGCAGAGAACTGGCTGAACTTGGCAGAAGGGGAGGGCTCGCCAA--AGC--TTCCC-------CTTTTCCCTCCTTAAACATCTAAGCGCTTTCCAGTCTGTCCCTTGGTTGGCCTTGTTCTCCTGCCAGAGGGAAGGGGG----CTCATCATACCCTTCTTGCATATCCTTGGGGTTGCTTCCGTCCCTGTTTGGTATCAGTCTCCCTCATGTCTGGAAGCTATGTAACTAGTCACGGGATGGTAGTGATTAACACACTTCTCTGCTGGATCTCTAGTAAAGCATAATTCTAAGCTA-AGAGCAGTTCAGCCCCTGAGGAGTCACACATTTGAGGAAAAGCTGCTATCGATGATTTCGATCGTCTAGATTTCCACTAGCTCCCCTCAGACTAAAAGTTGTGCCCCAGTCCACTTCTTTCTCAAAG---------------------AAAAAAAAAAATGTTGGCTCAATTCAGACTGTGGCTGTTGGAGGATGATGGTGGTAGCAGGTTTTGTGAAACCCGAGAGGCTGACAAATGGTGAATCACAATGGCTGATCTGAGTTA--ATGGAAATTGAACT-AAGAGACACAAGGAATTCTGGAAAATGCCTTTGGGCAGCTCTCTGGGCTAAAAGAGGGACGTGGAGATAAAGGTTTTCACTCGAGGTCTCCTTTAAGGAGCCCAGCTTCCAAG------------AGTACAGAAAGTCCAGGTCATGAAC----TATCGTAAAGTTGAGAAAGAATCATGCA-----TGTGATTCAGCATCGGTGAGTTTTCCGGAATTATCAGCCAGCATCCTCTAACAAACTCACGAAATGCCAGA--CTCCTCTGACTCTC----TCAATACAGTGAGAACCAGAGTCAGGAACAGACAAGCAGTGCTGCTTTGAGCAACCTGCCTCTGGTGAAGTTGAC---------TCTCAAAGTTCAAATGGTGATGGCGAGGTTGATGCTGTGACATCTAGATGCTTGTAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAAGACCCTTTCATAAAAAGCAGAACTCCATCTATTCTTTCTTAGAAAAGGGAGCTGGAGG-AAGCGGGGTCAAACACCATCCCTGGAAATGCAGCACAAAC-CACTGGAAAGCACAGAGCTTGCCTTTGGAGGCCTCAGCCAGAACCAGCTGAACTGAGATGCACTCAAGGTGCCTCAAGCTCAAGATTCTGCCTCTCTTAAAAGGTCTGTGGGAGCTGCCTTCTCTACCTTTCCT-ATTATCCTTACCTCCTTCTAGGAAAAAAGAAGAGAAAAACACTTAAACTCATTCTCCTA---TTCTCCCCTGCTAGGGATACAACCATTTAGAATTTGGCCTAGTCTCCATTGAGTACGTGGCTTGCCATCTTTTGGGAATGGCCCCTTTGTGATCATGACCTCAAACTTTT--GTTTTTTCAGTCAGCTAAAGTTCTCCCTC------AAAGCAAAA-------GCAAAATCCTCCCTGCCCCCATTCCCTAGAACTGTGAAAGCCC-GCATCCCATTCCCCACTCCTCTAACTAAAATATTTATATACATACAACAAAAATTGTCTTAA---CAGCAACAAACCAAACTTTGGCTTGGGGTGGGGGG-ATCCTTAAAAATGCCCAATGGAC-TGGGCC-GTTGGTGTCCCCTTAGTCTCCGTCCTCCTCCCCAGGATGAGTAATAATTGCATCGAGGCCTCTAGCTTCCTTG---------ACATCACCCCTAGTTGCAGGCACAGCCTCTCTCCCAGTTATGAGGCGAGACAGGATTC--------CGAAGGGGGAGAGGATATGTATTCTACGCGACAGGCCAATGCCCTCTCAGACGCATCACTCTGCTTAC-AAAGAATGCTTGATGCTGTCGTAGGTCAGTCATTTTAATTCAGGGACATGAGTCAGTTATCAGTCAAGAACATGTGTGGAGGCAGGAGTT----------------------------------------------------------------AAaaaacaaacccaaaacaaacccataacaaaccAGAAGCTCCATGTCTCTGAATTACTCCCTTTAGCAGCTGTCCCTTGGGTGAAAGGTCACCCTAGTACCAATGTGAATAGACCAGGGAGCCAAAAAGACCGTGCTTTTCTATTTCCTAATGCCTTCATTTGGGAAATGCTGTAGGACACTTGCTTTGATCAGTTCTATCTAATAGCTAGAAGAGAAACTC--TCTCTCCTACGTTGATAACACAGAAAATTACAGCCAGATGGCAACGGCAGTGACT------------CACTG-CATGACTCTTCCTGGCGATACAGAAGACCCTTGCCATTTCAGACCCTCCTTCCAATATGGGAGGGCAGCAATCTCAGGGCCTCCGCGTTTTATGTCCTGTAGTGTTAATGTACACAAAGTGGTCCGGGTGCTCAGCTGGGTGTTTTTGGAGGACAGTGAGAAGCTTGGCAGGACAGCCACA---GGGCTCAAGACTGTGGATAGAGAAGTGACTCATA-AAGGCTCTGGAAGATGAAAATTCCTATGGCTTTGGAGC----AAGTACAAAGTGCCTCTGCCTGCCCTTCCATGTCCTC-----ATCACCA-AAACTTCCAGGGACTGCTGACCTA-GGACCTGGTACTCTATCTTTCCCCAGCAGATTCTTTATGCTGTTTTTTAAACTTTGT----ACTTTCTAAGGCAAGAAAA----AAGTAAGAAATACCAG-----------------ATCTTCTAATA--CTCCTTTTCTCTTCCTCACCCTCTTTAATGGCTGTGAACACTTTGTACTTCTAATCCTCAAGCGGTGCCCAGACATCT-GGGGGAAATCTGGTCACTGGCTTATTCATCTTTCTGTCCCTGGGTCCTGAATTCCTGAATCTTATGGACATGAGAGCAGGATGTTAATACAAGAATACATGAGCTAAGCTGTGGTTCAATTAAAGGAGAAGAAGCCCAGAAAGAATGCT-AAGTTGCAGGAACAAAAAGAAATGATCTTTTTCATACTCCAGAGTTCACTCCGAGATCGGTTTCCTAATGAGGTGT---TTATTATCCACAGTCTGAGAGCACGTTTGGAAATATCATTACTATAATTCCAAAAACAATGCC-AACTGTCTCAGGCTGTGCGTGTAAGATGATTGTAAAAAGAATGGAGAAGACAGGAGGGAAGAGGAGAGGAAAGCGTCTTTTTAATTCTCCTGCTTTATAAGCACAAATTCCT---ATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAACTGCCTGTCAAAAGACCAGAAACTCAGAAGACGAGAAGAACATCCTGTTGCGGAAAGATCTCTCCCACTTCTGCTTGT-CCCCCAGCCATTCAGCACCAGGTACACTTTGGTAATTCTGTCTGCTGATTTCTGATCAGATGCATTGATCAGCTCCTAAT i macFas5.chr10 C 0 I 6 s papAnu2.chr10 76236267 5156 + 90941950 TAATACACACAGGCC--AAAGAATGgtgtttctctcttttatttaaaaacagtgcTTCATTACCATGTGCAAAGGCTGAGGCAGTGCTCCTCCTTCGCTTAGAGTTTATAAAAGCCAGCAACATGATCAATAATTTATACACATGGAGagtaatacaaaaaaataaggaataaaagcTAAAGATCTAACTACTCCGACCTTcacaattccagctacttgataATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAAGCTACTATACAATATGATTCTTAACGAGAA--------------GGGAAGGGAATTAGAGACTGTCACAAAGCCCTGGGATGCTTCTCTGGAGTTAGCAGGGAAACAGGACCCTGGGCAAGCAGCTCGGGTGTCCTAGGAAGTGATTCTGGGGGAGGC---CGGGAGGGGA-CAGAGAAGGCTGGGTGGTCGATTACACAAGCATCC-CATGTAATGGCCCCCTGCCCC--AAGGTACCTGTTTTGCCATGGCAGTGGGA---GGGGCTGGAGGAACAGCATGTTGCATGTAGGGATGGTCCGGTTCCTGCCATGGGGAAGGagtggggagaagaggagaggtTCTGTGGCA-TTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGCAGGTCAGCCTGTCAGGGACAAGTACACTCCACCGGCTCTCTTCTCGCTTTGCAGCCCTAGCTTACGTGTGTCAGCCCCAGGTTTGCTCCAGCTATTCACAAGCAGAA-TA-TAACACAAG--AAAAACAATTCATATCCcttagggaaaaaaagaggatCAATTCATCACTCGATATATAATACAGCCAAAATGAGCTGCCaaaacaagcacacacac--------aaataccgtgaacagaaaaatacaagaaaatgacTAAGCTGGG--AGTCCTGACGGGT-TATGGACGTTGCTTAAAGCAC-TTATCAGTCCCcggaaaaaccaaaccaaaacac--gttttaaaaattca-aaaactcatGTACCCCCTGGGAAACTGGTGTTGGTGACgaagggcagggggt--------ggggagagaaaagagaatcacTGTTCCCTTCTTGCTCGCCAGTGTGAGTGCAGTC---CTCAGGTCGCTGGCATGGACGCAAGTGCCAGACAA--GGAG--GACCAAGTCCCTCTGCCGGTGGCCTCCTAAAAGGCAAGGCTTGAGTTTTGGCTGCTAAGCAGTTCTCTCCGTTACCAATCCCTGCCGACCAGCACTACCATGGCTGAATTGATCTACCG--TTTTCCTGAGTAAACTGTAACTGGCTACAGTTTCGGTAACATGGAAAAGAACTCAGCTACCACAGCCAACTGCAAC--ACTTCAGGAATCCCCTCCATCCCTGGGC---TCCTCACTCCTAGTGCATCTGATCGAGGAATTTGACAACTTGCTGCAGTCTGGTCTGTAAGCCTTGTTTGCAAAGAAAGGTGCC-AGGGACTCTACTACGCTCACCGAACCAGAGGGCACACGCTGGCTTAGGACACCCAGAGCCTACTTGGAA-AGGGCCCTGTTTCATGCTCTAGCTCTTGGATGGCTATTGCCTGGCCGATCAGTAAAGCAAGTATGAAGGAAGTacacagga-aaaggaaagggagggaagaggctTTTGGACAGTAACATTTCCaaaa-------aaaTATAGTGTTTTATGCAACA--GAGAATCAAGTTTCACT-GTGTATACTACAAATGGTCAAACATTTTCAAGAGcatgacaaaataaaaacacacaaatttacGTCTGATGTTCACCTTGCCCactattttttt--cctatcttaAAACAGTGCAAACAGG-TAACTTATGCTTT-TAAAACACCACGACCCCTTCCCCAC-----CCCGCAAAGTCCCTTTCCTCCTAgtatctggggg--aaaaaatctgCAATTCTGCAAATGTCACTGTGCTAGAGGGTTGCAAGCAGCAGAGAACTGGCTGAACTTGGCAGAAGGGGAGGGCTCGCCAA--AGC--TTCCC-------CTTTTCCCTCCTTAAACATCTAAGTGCTTTCCAGTCCGTCCCTTGGTTGGCCCTGTTCTCCTGCCAGAGGGAAGGGGG----CTCATCATGCCCTTCTTGCATATCCTTGGGGTTGCTTCCGTCCCTGTTTGATATCAGTCTCCCTCATGTCTGGAAGCTATGTAACTAGTCACGGGATGGTAGTGATTAACCCACTTCTCTGCTGGATCTCTAGTAAAGCATAATTCTAAGCTA-AGAGCAGTTCAGCCCCTGAGGAGTCACACATTTGAGGAAAAGCTGCTATCGATGATTTCGATCGTCTAGATTTCCACTAGCTCCCCTCAGACTAAAAGTTGTGCCCCAGTCCActtctttctcaaagaa------------------aaaaaaaaaaaatgttggctcAATTCAGACTGTGGCTGTTGGAGGATGATGGTGGTAGTAGGTTTTGTGAAACCCGAGAGGCTGACAAATGGTGAATCACAATGGCTGATCTGAGTTA--ATGGAAATTGAACTGAAGAGACACAAGGAATTCTGGAAAATGCCTTTGGGCAGCTCTCTGGGCTAAAAGAGGGACGTGGAGATAAAGGTTTTCACTAGAGGTCTCCTTTAAGGAGCCCAGCTTCCAAG------------AGTACAGAAAGTCCAGGTCATGAAC----TATAGTAAAGTTGAAAAAGAATCATGCA-----TGTGATTCAGCATCGGTGAGTTTTCTGGAATTATCAGCCAGCATCCTCTAACAAACTGACGAAATGCCAGA--CTCCTCTGACTCTC----TTAATACAGTGAGAACCAGAGTCAGGAACAGACAAACAGTGCTGCTTTGAGCAACCTGCCTCTGGTGAAGTTGACTGTACGGAGTCTCAAAGTTCAAATGGTGATGGCGAGGTTGATACTGTGAAATCTAGATGCTTGTAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAAGACCCTTTCATAAAAAGCAGAACTCCATCTATTCTTTCTTAGAAAAGGGAGCTGGAGG-AAGCGGTGTTAAACACCATCCCTGGAAATGCAGCAGAAAC-CACTGGAAAGCACAGAGCTTGCCTTTGGAGGCCTCAGCCAGAACCAGCTGAACTGAGATGCACTCAAGGTGCCTCAAGCTCAAGATTCTGCCTCTCTTAAAAGGTCTGTGGGAGCTGCCTTCTCTACCTTTCCT-ATTATCCTTACCTCTTcctaggaaaaaagaagagaaaaacacttAAACTCATTCTCCTA---TTCTCCCCTGCTAGGGATACAACCATTTAGAATTTGGCCTAGTCTCCATTGAGTACGTGGCTTGCCATCTTTTGGGAATGGCCCCTTTGTGATCATGACctcaaactttt--gttttttcagtcAGCTAAAGTTCTCCctcaaagcaaaagcaaaa-------gcaaaatcctCCCTGCCCCCATTCCCTAGAACTGTGAAAGCCC-GCATCCCATTCCCCGCTCCTctaactaaaatatttatatacatacaacaAAAATTGTCTTAA---CAGCAACAAACCAAACTTTGGCTTGGGGTGGGGGG-ATCCTTAAAAATGCCCAATGGAC-TGGGCC-GTTGGTGTCCCCTTAGTCTCCGTCCTCCTCCCCAGGATGAGTAATAATTGCATCGAGGCCTCTAGCTTCCTTG---------ACATCGCCCCTAGTTTCAGGCACAGCCTCTCTCCCAGTTATGAGGCGAGACAGGATTC--------CGAAGGGGGAGAGGGTATGTATTCTACGCGACAGGCCAATGCCCTCTCAGACACATCACTCTGCTTAC-AAAGAATGCTTGATGCTGTCGTAGGTCAGTCATTTTAATTCAGGGACATGAGTCAGTTATCAGTCAAGAACATGTGTGGAGGCAGgagtt----------------------------------------------------------------aaaaaacaaacccaaaacaaacccataacaaaccAGAAGCTCCATGTCTCTGAATTACTCCCTTTAGCAGCTGTCCCTTGGGTGAAAGGTCACCCTAGTACCAATGTGAATAGACCAGGGAGCCAAAAAGACCgtgcttttctatttcctaatgCCTTCATTTGGGAAATGCTGTAGGACACTTGCTTTGATCAGTTCTATCtaatagctagaagagaaactC--TCTCTCCTACGTTGATAACACAGAAAATTACAGCCAGATGGCAACGGCAGTGACT------------CACTG-CATGACTCTTCCTGGCGATACAGAAGACCCTTGCCATTTCAGACCCTCCTTCCAATATGGGAGGGCAGCAATCTCAGGGCCTCCGCATTTTATGTCCTGTAGTGTTAATGTACACAAAGTGGTCCGGGTGCTCAGCTGGGTGTTTTTGGAGGACAGTGAGAAGCTTGGCAGGACCGCCACA---GGGCTCAAGACTGTGGATAGAGAAGTGACTCATA-AAGGCTCTGGAAGATGAAAATTCCTATGGCTTTGGAGC----AAGTACAAAGTGCCTCTGCCTGCCCTTCCATGTCCTC-----ATCACCA-AAACTTCCAGGGACTGCTGACCTA-GGACCTGGTACTCTATCTTTCCCCAGCAGATTCTTTATgctgttttttaaactttgt----actttctaaggcaagaaaa----aagaaagaaataccag-----------------aTCTTCTAAta--ctccttttctcttcctcacccTCTTTAATGGCTGTGAACACTTTGTACTTTTAATCCTCAAGCAGTGCCCAGACATCT-GGGGGAAATCTGGTCACTGGCTTATTCATCTTTCTGTCCCTGGGTCCTGAATTCCTGAATCTTATGGACATGAGAGCAGGATGTTAATAAAAGAATACATGAGCTAAGCTGTGGTTCAATTAAAGGAGGAGAAGCCCAGAAAGAATGCT-AAGTTGcaggaacaaaaagaaatgatcttTTTCATACTCCAGAGTTCACTCCGAGATCGGTTTCCTAATGAGGTGT---TTATTATCCACAGTCTGAGAGCACGTTTGGAAATATCAATACTATAATTCCAAAAACGATGCC-AACTGTCTCAGGCTGTGTGTGTAAGATGATTGTAAAAAGAATGGAGAAgacaggagggaagaggagaggaaagcgTCTTTTTAATTCTCCTGCTTTATGAGCACAAATTCCT---ATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAAGACCAGAAACTCAGAAGACTAGAAGAATATCCTGTTGCGGAAAGATCTCTTCCACTTCTGCTCG--CCCCCAGCCATTCAGCACCAGGTACACTTTGGTAATTCTGTCTGCTGATTTCTGATCAGATGCATTGATCAGCTCCTAat i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18507162 5148 + 33263144 TAATACACACAGGCC--CAAGAATGGTGTTTCTCTCTTTTATTTAAAAACAGTGCTTCATTACCATGTACAAAGGCTGAGGCAGTGCTCCTCCTTCGCTTAGAGTTTATAAAAGCCAGCAACATGATCAATAATTTATACACATGGAGAGTAATACAAAAAAATAAGGAATAAAAGCTAAAGATCTAACTACTCCGACCTTCACAATTCCAGCTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAAGCTACTATACAATATGATTCTTAACGAGAA--------------GGGAAGGGAATCAGAGACTGTCACAAAGCCCTGGGATGCTTCTCTGGAGTTAGCAGGGAAACAGGACCCTGGGCAAGCAGCTCGGGTGTCCTAGGAAGTGATTGTGGGGGAGGC---CGGGAGGGGA-GAGACAAGGCTGGGTGGTCGATCACACAAGCATCC-CATGTAATGCCCCCCTGCCCC--AAGGTACCTGTTTTGCCATGGCAATGGGA---GGGGCTGGAGGAATAGCATGTTGCATGTAGGGATGGTCCGGTTCCTGCCATGG----GGAGTGGGGAGAAGAGGAGAGGTTCTGTGGCA-TTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGCAGGTCAGCCTGTCAGGGACAAGTACACTCCACCGGCTCTCTTCTCGCTTTGCAGCCCTAGCTTACGTGTGTCAGCCCCAGGTTTGCTCCAGCTATTCACAAGCAGAA-TA-TAACACAAG--AAAAACAATTCATATCCCTTAGGGAAAAAAAGAGGATCAATTCATCACTCGATATATAATACAGCCAAAATGAGCTGCCAAAACAAGCACACACAC--------AAATACTGTGAACAGAAAAATACAAGAAAATGACTAAGCTGGG--AGTCTTGACGGGG-TATGGACATTGCTTAAAGCAC-TTATCAGTCCCCGGAAAAACGAAACCAAAACACATGTTTTAAAAATTCA-AAAACTCATGTACCCCCTGGGAAACTGGTGTTGGTAACAAAGGGCAGGGGGT--------GGGGAGAGAAAAGAGAATCACTGTTCCCTTCTTGCTCGCCAGTGTGAGTGCAGTC---CTCAGGTCGCTGGCATGGACGCAAGTGCCAGACAA--GGAG--GACCAAGTCCCTCTGCCGGTGGCCTCCTAAAAGGCAAGGCTTGAGTTTTGGCTGCTAAGCAGTTCTCTCCGTTACCAATCCCTGCCGACCAGCACTACCATGGCTGAATTGATCTACCG--TTTTCCTGAGTAAACTGTAACTGGCTACAGTTTCGGTAACATGGAAAAGAACTCAGCTACTACAGCCAACTGCAGC--ACTTCAGGAATCCCCTCCATCCCTGGGCGAGGCCTCACTCCTAGTGCATCTGATCGAGGAATTTGACAACTTGCTGCAGTCTGGTCTGTAAGCCTTGTTTGCAAAGAAAGGTGCC-AGGGACTCTCCTACGCTCACCGAACCAGAGGGCACACGCTGGCTTAGGACACCCAGAGCCTACTTGGAA-AGGGCCCTGTTTCATGCTCTAGCTCTTGGATGGCTATTGCCTGGCCGATCAGTAAAGCAAGTATGAAGGAAGTACACAGGA-AAAGGAAAGGGAGGGAAGAGGCTTTTGGACAGTAACATTTCCAAAA-------AAATATAGTGTTTTATGCAACA--GAGAATCAAGTTTCACT-GTGTATACTACAAATGGTCAAACATTTTCAAGAGCATGACAAAATAAAAACACACAAATTTACGTCTGATGTTCACCTTGCCCACTATTTTTTT--CCTATCTTAAAACAGTGCAAACAGG-TAACTTATGCTTT-TAAAACACCACGACCCCTTCCCCAC-----CCCCCAAAGTCCCTTTCCTCCTAGTATCTGGGGG--AAAAAACCTGCAATTCTGCAAATGTCACTGTGCTAGAGGGTTGCAAGCAGCAGAGAACTGGCTGAACTTGGCAGAAGGGGAGGGCTCGCCAA--AGC--GTCCC-------CTTTTCCCTCCTTAAACATGTAAGTGCTTTCCAGTCCGTCCCTTGGTTGGCCTTGTTCTCCTGACAGAGGGAAGGGGG----CTCATCATGCCCTTCTTGCATATCCTTGGGGTTGCTTCCGTCCCTGTTTGATATCAGTCTCCCTCATGTCTGGAAGCTATGTAACTAGTCACGGGATGGTAGTGATTAACCCACTTCTCTGCTGGATCTCTAGTAAAGCATAATTCTAAGCTA-AGAGCAGTTCAGCCCCTGAGGAATCACACATTTGAGGAAAAGCTGCTATCGATGATTTCGAGCGTCTAGATTTCCACTAGCTCCCCTCAGACTAGAAGTGGTGCCCCAGTCCACTGCTTTCTCAAAG--------------------AAAAAAAAAAAATGTTGGCTCAATTCAGACTGTGGCTGTTGGAGGATGATGGTGATAGTAGGTTTTGTGAAACCCGAGAGGCTGACAAATGGTGAATCACAATGGCTGATCTGAGTTA--ATGGAAATTGAACT-AAGAGACACAAGGAATTCTGGAAAATGCCTTTGGGCAGCTCTCTGGGCTAAAAGAGGGACGTGGAGATAAAGGTTTTCACTAGAGGCCTCCTTTAAGGAGCCCAGCTTCCAAG------------AGTACAGAAAGTCCAGGTCATGAAC----TATAGTAAAGTTGAAAAAGAATCATGCA-----TGTGATTCAGCATCGGTGAGTTTTCTGGAATTACCAGCCAGCATCCTCTAA-AAACTCACGAAATGCCAGA--CTCCTCTGACTCTC----TTAATACAGTGAGAACCAGAGTCAGGAACAGACAAGCAGTGCTGCTTTGAGCAACCTGCCTCTGGTGAAGTTGACTGTGTGGAGTCTCAAAGTTCAAATGGTGATGGCGAGGTTGATACTGTGAAATCTAGATGCTTGTAAGGGCCCCAATTCTCAGTGTTGACACTGAAAACCAAAGACCCTTTCATAAAAAGCAGAACTCCATCTATTCTTTCTTAGAAAAGGGAGCTGGAGG-AAGCGGTGTTAAACACCATCCCTGGAAATGCAGCAGAAAC-CACTGGAAAGCACAGAGCTTGCCTTTGGAGGCCTCAGCCAGAACCAGCTGAACTGAGATGCACTCAAGGTGCCTCAAGCTCAAGATTCTGCCTCTCTGAAAAGGTCTGTGGGAGCTGCCTTCTCTACCTTTCCT-ATTATCCTTACCTCTTTCTAGGAAAAAAGAAGAGAAAAACACTTAAACTCATTCTCCTA---TTCTCCCCTGCTAGGGATACAGCCATTTAGAATTTGGCCTAGTCTCCATTGAGTACGTGGCTTGCCATCTTTTGGGAATGGCCCCTTTGTGATCATGACCTCAAACTTTT--GTTTTTTCAGTCAGCTAAAGTTCTCCCTCAAAGCAAAAGCAAAA-------GCAAAATCCTCCCTGCCCCCATTCCCTAGAACTGTGAAAGCCC-GCATCCCATTCCCCGCTCCTCTAACTAAAATATTTATATACATACAACAAAAATTGTCTTAA---CAGCAACAAACCAAACTTTGGCTTGGGGTGGGGGG-ATCCTTAAAAATGGCCAATGGAC-TGGGCC-GTTGGTGTCCCCTTAGTCTCCGTCCTCCTCCCCAGGATGAGTAATAATTGCATCGAGGCCTCTAGCTTCCTTG---------ACATCGCCCCTAGTTTCAGGCACAGCCTCTCTCCCAGTTATGAGGCGAGACAGGATTC--------CGAAGGGGGAGAGGATATGTATTCTACGCGACGGGCCAGTGCCCTCTCAGACACATCACTCTGCTTAC-AAAGAATGCTTGATGCTGTCGTAGGTCAGTCATTTTAATTCAGGGACATGAGTCAGTTATCAGTCAAGAAC--GTGTGGAGGCAGGAGTT----------------------------------------------------------------AAAAAACAAACCCAAAACCAACCCATAACAAACCAGAAGCTCCACGTCTCTGAATTACTCCCTGTAGCAGCTGTCCCTTGGGTGAAAGATCACCCTAGTACCAATGTGAATAGACCAGGGAGCCAAAAAGACCGTGCGTTTCTATTTCCTAATGCCTTCATTTGGGAAATGCTGTAGGACACTTGCTTTGATCAGTTCTCTCTAATAGCTAGAAGAGAAACTC--TCTCTCCTACCTTGATAACACAGAAAATTACAGCCAGATGGCAACGGCAGTGACT------------CACTG-CATGACTCTTCCTGGCGATACAGAAGACCCTTGCCATTTCAGACCCTCCTGCCAATATGGGAGGGCAGCAATCTCAGGGCCTCCGCATTTTATGTCCTGTAGTGTTAATGTACACAAAGTGGTCCGGGTGCTCAGCTGGCTGTTTTTGGAGGACAGTGAGAAGCTTGGCAGGACAGCCACA---GGGCTCAAGACTGTGGATAGAGAAGTGACTCATA-AAGGCTCTGGAAGATGAAAATTCCTATGGCTTTGGAGC----AAGTACAAAGTGCCTCTGCCTGCCCTTCCATGTCCTC-----ATCACCA-AAACTTCCAGGGACTGCTGACCTA-GGACCTGCTACTCTGTCTTTCCCCAGCAGATTCTTTATTCTGTTTTTTAAACTTTGT----ACTTTCTAAGGCAAGAAAA--------AAGAAATACCAG-----------------ATCTTCTAATA--TTCCTTTTCTCTTCCTCACCCTCTTTAATGGCTGTGAACACTTTGTACTTCTAATCCTCAAGCGGTGCCCAGACATCT-GGGGGAAATCTGGTCACTGGCTTATTCATCTTTCTGTCCCTGGGTCCTAAATTCCTGAATCTTATGGACATGAGAGCAGGATGTTAATAAAAGAATACATGAGCTAAGCTGTGGTTCAATTAAAGGAGAAGAAGCCCAGAAAGAATGCT-AAGTTACAGGAACAAAAAGAAATGATCTTTTTCATACTCCAGAGTTCACTCCGAGATCGGTTTCCTAATGAGGTGT---TTATTATCCACAGTCTGAGAGCACGTTTGGAAATATCAATACTATAATTCCAAAAACGATGCC-AACTGTCTCAGGCTGTGCGTGTAAGATGATTGTAAAAAGAGTGGAGAAGACAGGAGGGAAGAGGAGAGGAAAGCGTCTTTTTAATTCTCCTGCTTTATAAGCACACATTCCT---ATCTATCAGCATGTGGATTCCAGCCACATCCAACCAGAATTGCCTGTCAAAAGACCAGAAACTCAGAAGACTAGAAGAATATCCTGTTGCGGAAAGATCTCTTCCACTTCTGCTTGT-CCCCCAGCCATTCAGCACCAGGCACACTTTGGTAGTTCTGTCTGCTGATTTCTGATCAGATGCATTTATCAGCTCCTCAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198211995 5183 + 210400635 CAATCCACACAGGC---AAAGAATGGTGTTTCTCTCTTTTATTTAAAAACAGTGCTTCATTACCATATGCAAAGGCTGAGGCAGTGCTCCTCCTTTGCTTAGAGTTTATAAAAGCCAGCAACATGATCAATAATTTATACACATGGAGAGTAATACAAAAAAATAAGGAATAAAAGCTAAAGATCTAACTACTCCGAACTTCACAATTCCAGCTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAAGCTACTATACAATATGATTCTTAACGAGAA--------------GGGAAGGGAATTCGAGACTGTCACAAAGCCCTGGGGTGCTTCTCTGGAGTTAGCAGGGAAACAGGACCCTGGGCAAGCAGCTCGGGTGTCCTAGGAAGTGATTCTGGGGGAGGT---CGGGAGGGGA-GAGAGAAGGCTAGGTGGTCGATTACATAAGCATCC-CATGTAATG-CCCCATGCCCC-AAAGGTACCTGTTTTGCCATGGCAATGGGA---GGGGCT-GAGGAACAGCATGTTGCATGTAGGGATGGTCCGGTCCCTGCCATGG----GGAGTAGGGAGAAGAGGAGAGGTTCTGTGGCA-TTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGGTCAGCCTGTCAGGGACAAGTACACTCCACCGGCTCTCTTCTCACTTTGCAGCCCTAGCTTACGTGTGTCAGCCCCAGGTTTGCTCCAGCTATTCACAAGCAGAA-TA-TAACACAAG--AAAAACAATTCATACCCCTTAGGGAAAAAAAGAGAATCAATTCATCACTCGATATATAATACAGCCAAAATGAGCTGCCAAAACAAGCACACACAC--------AAATACTGTGAACAGAAAAACACAAGAAAATGACTAAGCTGGG--AGTCTTGATGGGG-TATAGACATTGCTTAAAGCAC-TTATTAGGCCCCAGAAAAACCAAACCAAAAAACATTTTTTAAAAATTCA-AAAACTCATGTACCCCCTGGGAAACTGGTGTTGGTAACAAAGGGCAGGGGGT--------AGGGAGAGAAAAGAGAATCACTGTTCCCTTCTTGCTCGCCAGTGTGAGTGGAGTC---CTCAAGTCATGGGCATGTACACGACTACCAGACAA--GGAG--GACCAAGTCCCTCTGCTGGTGGCCTCCTAAGAGGCAGGGCTTGAGTTTTGGCTGATGAGCGGTTCTCTCCGTTACCAATCCCTGCCAACCAGCACTACCATGGCTGAATTGATCTACCG--TTTTCCTGAGTAAACTGTAACTGGCTACAGTTTCGGTAACAAGGATAAGAACTCAGCTACTACAGCCAACTGCAAT--ACTTCAGGAATCCCCTCCATTCCTGGGC---TCCTCACTCCTAGTGCATCTGATTGAGGAATCTGATAATTTGCTGCAGTCTGGTCTGTAAGCCTTATTTGCAAAGAAAGGTGCC-AGGGACTCTACTGCTCTCACTAAACCAGAGGGCACACGCTGGCTTAGGACACCCAGAGCCTACTTGGAA-AGGGCCCTGTTTCATGCTCCAGCTCTTGCATGGCTATTGCCTGGCTGATCAGTAAAGCAAGTATAAAGGAAGTACACAGGA-AAAGCAAAGGGAGGGAAGAGGCTTTTGGACAGCAACATTTCCAAAA-------ATATATAGTGTTTTATGCAACA--GAGAATCAAGTTTCACT-GTGTATACTACAAATGGTCAAACATTTTCAAGAGCATGACAAAATAAAAACACACAAATTTACGTCTGATGTTCACCTTGCCCACTATTTTTTT--CCTATCTTAAAACAGTGCAAACAGGTTAACTTATGCTTT-TAAAACACCACGACCCCTTCCCCACCCCCACCCCCAAAGTCCCTTTCCTCCTAGTATCTGGGGG---AAAAATCTGCAATTCTGCAAATGTTACTGTGCTAGAGGGTTGCAAGCAGCAGAGAACTGGCTGAACTTGGCAAAAGGGGAAAGCTCATCAA--AGT--TTCCC-------CTTTTCCCTCCTTAAACATCTAAGTGCTTTCCAGTCTGT-CCTTGGTTGACCTTGCTCTCCC-CGAGAGGGAAGGCTG----TTCATCATGCCCTTCTCGCATATCCTTGGGGTTGCTTCCATCCCTGTGTGAT----GTCTCCCTCATGTCTGGAAGCTGTATAACTAGTTACAGGATGGCAGTGACTAACCCACTGATCTGCTTGTTCTCTAGTAAAGCATAATTCTAAACTA-AGAGCAGTTCAGCCCCTGAGGAGTCACACATTTGAGGAAAAGCTGCTATCGGTGATTTCTATTGGCTAGATGTCCGCTAGCTTCCCTCAAACTAAGAGTTGTGCCCCAGTCCACTTCTTTCTCAAGGGAaaaaacaaaaacagaaacaaaacaaaaaAACGCTGGCTCAATTCAGACTGTGGCTGTTGGAGGATGATGGTGAT---AGGTTTTGTTAAACCTGAGAGCCTGACAAATGGTGAATCACAATGGCTGATCTGAGTTAATATAGAAACTGAACT-AAGTGACACAAGGAATTCTGGAAAATGCCTATGGGCAGCTCTCTGGGCTAAAAGAGGGACGTGAAGATAAAAGTTTTCACTAGAGGCCTCCTTT-AGGAGCCCAGCTTCCAAG------------AGTATAGAAAGTGCAGGTCATGAACTACATACAGTAAAGCTGAAAAAGAATCATGGACGTACTGTGATTGAGCAT---TAAGTTTTCTGGAGTTATCAGCCAGCATCCTCTAACAAACTCATGAAATGCCAGA--CTCCTCTGACTCTCTTTCTTAATACAGTGAGAACCAGACTCACGAACAGACAAGCACTGCTGCTTTGAGAAACCTGCCTCTGATGAAGTTGACTGTATGGAGTCTCAAAATTCAAAAGGTGACCGGGAGCTTGACACTGTGAAGTCCAGATGCTTATAAGAGCCCCAATTTTTACTGTTGACACTGAAAACCAAAGACCCTTTTATGAAAAGCAGAACTGCATTTA----GTCTTAGAAAAGGGAGCTGGAGG-AAGCGGTGTTAAACACCATCCCTGGAAATGCAGCAGAACC-CACTGGAAAGCCCAGTGCTTGCCTTCGGAGGCCTCAGCCAGAACCAGCTGAACTGAGATGCACTAAAGGTGCCTCAAGCTCAAGATTCCGCCTCCCTTAAAAGGTCTGTGGGAGCTACCTTCTCTACCTTTCCC-ATTATCCTTACCTCTTTCTAGGAAAAAAGAAGAGAAAAACTCTTAAACTCATTCTCCTA---TTCTCCCCTGCTATGGATACAACCATTTAGAATCTGGCCTAGTCTCCACTAAGTAAGTGGCTTGCCATCTTTTGGGAATGGTCCCTTTTTGATCATGACCCCAAATTTCT--GTTCTTTTAGTCAGCT-AAGTTCTCCCTCAAAGCGAAAGCAAAA-------------TCCTCCCTGCCCCCATTCCCTAGAACTGTGAAAGCCCTGCATCCCCTTCCCCCCTCCTCTAACTAAAATATTTATATACATACAACAAAAATTGTCTTAA---CAGCAACAAACCAAACTTTGGCTTGGGGTAGGGGG-ACCCTTAAAAATGGCCAATGGAC-CGGGCA-GTTGGTGTCCCCTTATTCTCTATATTCCTCCCCAGAATCAGTAATAATTGCATCGAGGCCTCTAGCTTCCTTG---------ATGTCGCCCCTAGTTTCAGGCACAGCCTCTCTCCCAGTTATGAGGCGAAACAGGATTC--------TTAAGGGGGAAAGGATATGCATTATACACGACAGGCCAATGCCCTCTCAGATACATCACTCTGTTTCC-AAAGAATGCTTGATGCTGTCATAGGTCAGTCATTTTAATTCAGGGACATGAGTCAGTTATCAGTCAAGAACATGTGTGGAGGCAGGAGTT----------------------------------------------------------------AAAAAACAAACCAAAAGCAAACCCATAACAAACCAGAAGCTCCATGTCTCTGAATTACTCCCTTTAGCAGCTGTCCCTTGGGTGAAAGGTCACCCTAGTACCAATGTGAATAGACCAGGGAGCCAAAAAGACCGTGTTTTTCTATTTCCTAATGCCTTCATTTTGGAAATGCTGTAGGACACTTGCTTTTATCAGTTATATCTAATAGCTAGAAGAGAAACACTTTCTCTCCTACCTTAATAATATAGAAAATTATAGCCAGACAGCAATGGCAGTGACTCACTGCCGCTGCCACTG-CATGACTCTTTCTGGCAATACAGAAGACCCTTGCCATTTCAGACCCTCATTCCAACATAGGAGGGCAGCAATCTCAGGGGCTACACATTTTATGTCCTGTAGTGTTAATGTATACAAAGTGGTTCAGGTGCTCAGCCGGGTGTCTTTGGAGGACAGTGAGAAGCT-GGCGGGATAGCCACAGCAGGGCTCAAGACTGTGGATAGAGAAGTGACTCATA-AAGGCTCTGGGAGATGAAAATTCCTATGGCTTCGGAGC----ACGTACAAAGTGCCTCTGCCTGCCCTTGCATGTCCTA-----ATCACCA-AAACTTCCAGGGACTGCTGACCTA-GGACCTGGTACTCCACCTTTCCCCAGCAGATTTTTTATTCTA-TTTTTAAACTTTGT----ACTTTCTGAGGCAAAAAAAAAAAAAGGAAGAAATATCAG-----------------ATCTTCAAATA--TTCCTTTTCTCTTCCATGCCCTCTTTAATGGCTGTGAACAATTTGTATGTCTAATCTTCAAGCTGTGCCCAGACATCT-GGGGGAAATCTGGTCACTGGCTTATTCATTTTTCTGTCCCTGGGTCCTAAATTCCTGAATCTTATGGACATGAGAGCAGGGTATTAATAAAAGAATAGATGAGCTAAGCTGTGGTTCAATTAAAGGAGAAGAAGTCCAGAAGGGATGCC-AGGTTACA-GAACAAAAATAAATGATC-TTTTCACACTCCAGAGTTCATTCTGAGATTGGTTTCCTAATGAGGTGT---TTATTATCCACAGTCTGAGAGCACGTTTGGAAATATCAATACTATAATTCCAAAAACTATGTC-AACTGTCTCAGGCTGTTCATGTAAGATGATTGTAaaaagaatggagaagacaggagggaagaggagaggaaagCGTCTTTTTAATTCCCCTGCTTTATAAGCACAAATTCCT---ATCTATCAGCATGTGGATTCCAGCCACGGCCAACCAGAATTGCCTGTC-AAAGACCAGAAACTCAGAAGACTAGAAGAATATCCTGTTGCAGAAATATCTCTTCCACTTCTGCTTGT-CCCCCAGCCATTCAGCACCAGATACACTTTGGTAATTCTGCCTGCTGATTTCTGATCAGATGCATTTATCAGCTCCTAAT i calJac3.chr1 C 0 C 0 s mm10.chr15 77078975 4754 + 104043685 CAAAACGC---------CAGGGGTGGTGTTTCTCTCTTTTATTTAAAAACAGTGCTTCATTACCATTTGCAAAGGCTGAGGCAGGGCCCCTCCTTTGCTAAGAGTTTATAAAAGCCAGCAACATGATCAATAATTTATACACATGGAGAGTAATAC-AAAAAATAATGAATAAAAGCTAAAGATCTAACTACT-CAACCTTCACAATTCCAGCTACTTG---ATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAAGCTACTATACAATATGATTCTTAAGGAGGAAgagggagggagggagggagggagTTAGAGACTGTCACAACGCCCTGGG-TGCTTCTCTGGAGTTAGCAGGGAAACAGGACCCTGGGCAAGCAGCTCGGGTGCCCTAGGAGGTGATTCTGGGAGAGGATGGTGGGAGGGAAGGAGACACAGCGGGGTGGTCAGCTGGACAAGCATCCGCATGTGC--CCCCCATGTCCC-AGTGGTGCCTGTCCTGC--------------------ATGGGGAAGCCACATGTGCCAGGCAGG------CCACTCCCTGCCACA-----GGGGTGTGGAGAAGA-GCGAGGTTCTGTGGTACTTTTGAGCCTTGAAAAGAGAGAGACTCAAAACCTGAGAGCCTCAG--------------------------------------------TTCACTCTGCAGCTCTAACTTGCACGTGTCCGCCCCAGGGTGGCTCTAGCTATTCACAGGCTGAA-TGCTGACGGAGG--GAAG-----TCATGTCTCTTAGGG-----GAAAGGATCAGCTCATCACTCGCTATATAACGCAGCC-AAACGGGCTGCC-CAACAAGCACGCACACA-----AGAAATACTGTTAACAG-AAAATACAAGAAACCACCTAAGCTAGG--AGTCCTGATGGGG--ACAGACAGCGACTAAAGCGC---GTCAGTCCCCGGAAAAGACAAACCAAAAGCATTTTCTGAAAAACTCA-AAAACTCGCGTG-CCCCTGGGAATCTGGCATTGGTAACC---GGAAGAGGG----------AGGGAAGGAAAGAGCATCGCTGTTCCCTTTTTGCCTGCCAGGGTGAAAGCAGCCCCACCCAG--CGCTGGCAAGTACA-----------------GAG--GGCTGC-CCCCGAGGTGGGAGGTCTCTGCAAAGGCAAGG-GTGAGTTTTGGCTGATGGGCAGT--TCTCAGTTACCAATCCCTGCCAGCCAGCACCGCCATGGCTGAACTCATCTACCGTTTTTTCCTGAGTACACTGTAACTGGCTACAGTTTCGGTAACTTGCATAAGAACATGGCTTCCACAGCCAACCACAAT--ACTTCAGGGACCCGCGCC--CCCT-------GACTCACTTCTATTGCCTC--GCTGAAGAGTTTGGCAATCTGTGG-----TAGTTGGTGAGCCT--TTCGAAAGGAAAGTTGCCAAGGGACTGTCCTGCACTCAGTAATCTAGAGGGCACATGCTGGCTTAGGACACCCAGAGCCTGCTTGGGATGGGGCCCTGTTTCCCGCTCTAGCCCAGGGATGGCAACTGCCTGGCTGATGAG-GAAGCAAGGAGAAAGGAGGTACACAGGA-GAGGGGATGGGTGGGAAGAGGCTTCCGGACAGCAACATTTCCAAAA---------ATATAGTGTTTTATGAAACA--GAGAATCAAGTGTCACTGGTGTATACTACAAATGATCAGACATTCTCAAGAGCATGACAAAAGAAA---ACACACGTTTACATTAGATGTTCACCGTGCCCACTATTGTTT---CCTATTTGAAAACAGTGCAAACAGG-TAACTTATGCTTT---AAACACCAAGACCCCTTCCCCAC-----CCCCCAAAGTCCCTTTCCTCCTAATATCTGGGAG---AAAAGTCTGCAATTTTGCAAACATTGCCATGCTAGAGGTTTG--AGTAGTGGAGAACTGGCTG-----GGCCAGAGGGGAAGGTTGGCCAGGCAGC--TTCCCGCCCCCTCCCCCCCTTCCTGGCACACCCGAG----TTCCAGACTG-CCCTTGATTGGCCTTGTTCGCCTGGCGCAGGGA--GGGG----CGCACTATGCTCTTCTTGCATA----------GGCTCACATCCTT-----------CTCATCTCAGTGTCTGGAAGCTACATGACTAGGTACAGGACGGAGGTGGTC-GCGGACCTGCCCGCTGTGCCTCAAAGAAAGCACAGC-CTAAACCA-AA--CAGTTCAGCCCC-GAGGAGTC-CATGCTTGAGGAAAAG-------------------------------CCACAAGCTCTCCTTAAACTAAGAGCCAAGCGCCAGGCAGTTTC-----CAAGG--------------------GAAGGAAACA-----CGGCTCAGTTCAGACAGCGGCTGCTGCAGGGTGGCGGTGGTGG-AGGTTCCTGGAAACCTGAGAGCCTTA-AAATGACAAGGAGC-ATGGTGCTTCTGGGCTG------AGGTTGAACT-AAGTAACAC-AGAAATTCTAGAAAAGACCTA-AGGCAGCTCTCCGGGCTGAAAGAGGAACATCCAGACAAACATTTTCACTACAAGTCTCCTTAAAGGAATCCAGCTTCTAGTAAT---ATTCGCAGCATAGAAAGCCCAGGCCACAGAG----GCCTGCAAAACTGCAAA--CACCCTTCTCACACTGCGATTCAGCGTCAGCCATCTTTTTGAAATCATCACCCAGAATCCTCTAACAGAGTCATAAAATGCCCGT--CTCCTCTAGCCTGCTTCCTAAAT-CAGT-----CC---------AACAAGCCAGCACAGTGGCCTTGAGGATC-----------------------------------------------AACCATGAGGCCAACATAGTGAAATCCAGACACTTGGGGGAG--CCAGCTCTCAGTGCTCACCCTGAAATCCAACGACCTTTGCATAAAAAGCC-AACTCCATCTAGTCTTCCTTGGAAAAGG--GCCTGAGG-AAGTGGCATCGGAGAGTGTCCTTGTCCACGCAGCAGAGATGCACTGGCAAACA----GACTGGCCTTGGAGGCCTCAGCCAGAACCAGCTGAACTGAAGTGCA-TGAAGGCCCCTCAGGCCC----TGCAGCAT---------GGGCCATGGGA-CTGTCCTCTTCACCCTGCGTGGCCACCCTTTCCT--GTCTAGGAAAGAAGAAG-----CCTTCTTCAACTCTCTCTCCCT---TCCTACCAT-CTGTGGATACAACTGTTGAGAGACTGGCCTCGTCTCCACTAGGTGAAGGGCTTGCCTTTCTGTGAGAATGGCCCTTATTAAACAAAGACCCAAAATGTCT--GTTCCTTTAGCCAGT--AAATTTTCTCAAAAAGAAACAAGAGAA-------AGAAAAACCCCTCTGCCCCCATTCTCTAGAACTCCAAAAGGCC-CCAGCCCATCCC---TTCCCCTTACTAAAATATTTATGTACATACAATGAAAACTGTCCTAATAGCAACAACAAACCAAACTTTGGCTTGGGGGAAGGGA-ATCC--ATAAGTGGCCAGCAGGC--AGGCA-GTCT-TGTCTCC-TATTCCACATGTT--GCCCCAGAAC---TAGTGACTACACTGAGGTCTCTGGCTTCCATG-------------------TTGTTTC---------------CTCAGGTATCATGGGAGATAGGATCT----------GAGGGCAAGATGGTATGTGTCA---ATTGCAGGTTAAGGCCCT-------------CCCTGCTTACAAAAGGATGCTTGATGCAGTCAAAGGTCAGCCACTTTAATTCAGGGACATGAATCATTTATCAGTCAAAAA--TGTGTAGAGGCAGAGGcaacaacaacaacaacaacaac-aacaacgacaacaacaacaGAAGAACCAAACCCCA--------ATAAAATAACCCTAAAACAGACCC-TGACAAAACCAAAGCT-CATGTCTCTGAACTACTCCCTTTAGCAGCAATCCCTCAGGTGAA------------------------CTGACCAGGGAGCCAG------CTGACATTCCCATTTCCTAATGCCTTCATTTTGGAGCCTCTGTGGGACCCTTGCCTT--TCGGATACATCTCAGATTTGGGGGAGAAAGAA--GTCCT------TTGGAAAC----AAATCTGAAGCCAGGT--------------TT------------CACTGCCATGGCCCCTGCAG--------AAGGACCCTTGCCATTTTACATCCTCCTTCCAAGGTTAAAAGGCTTAAAGTCCACGG----------------CCTGTCTTCTTAACGTTCCCCGAGGGGTCCAGGTGCTTGGCTG--TGACTCTAGAGGACACTGTGAAGCTGGATGCAGTGACCACA---------AGGGCTG-----------GAGACTCACA-GAGGCTCTGGAAGATGGAAATTCCTATGGCTTTGGAGT----GAGGACAAACTGCCTCTGCCTGCCCTTACTGGTCCTC-----ATCAGTA-CA--CTGGTAGGACAGCCAGCCTAGGGGCTTGGTTCCTTACCCTGCCCCAGCAGAGGCTTTCTGATGCCTTTCTTACTCTGTACTGACTTCGTGCTGCAAGAAAA----CG--AAGGGATATCGA---------------------TTGAACACCCCCCTTTTCTCTTCTACACACTCTTTAATGGCTCTGAACAATTTGTACTTTTAATCCTCATACTGTGCCCAGATACCTGGGGGGAAATCTGGCCACTGAC-TATTCATTCTTCGGTTCCTGGATCCCAAATCCCTGAATCTTGAGGACATGGGAGCAGCATGTTAATAAAAGAACAGAGGAGTTGCACAGTGGCTCAATTAAAGGGGCAGCAGCCCAGCAGGAATGCTGAGGTTTCTGAAAAGAAAAGAAACAAGTGTTTTCCTATTCTGGAGCTCACTCCAAGATCACTGTTGTACTGAGGTGT---TTCTCATCCACAGTCTGAGAGCGTGCTTGGAAATACCAGCACTGTAACTCCAAAAACCATGCCAAACACTCTCAGGCTGTGCCTGTAA-ATGATTGTAAAAAGAATAT-GAAGGCAGGAGGGAAGAGGAGAGAAAAGAATCTTTTAAATTCTCCTGTTTTGCAAGCACAAACTCCT---ACCTAAAGGCATGTGGATTCCAGCCACAGCCAGTCAGAGCCTCCAGCC-ACAGCC------------AGGCCAGGAGGGCACACTGCTGCAG--AGCTGGCCTCCAC-TCTGCTTATCCCCCCAGCCA-TCAGCACCAGATCCACTTTGGTAATTCTGTCTGCTGGCTTCTGATCAAATACATGTATCAGCTCCT--- i mm10.chr15 I 1 C 0 s canFam3.chr10 40836808 5231 - 69331447 AAACACACACAGGCC--AAAGAATGGTGTTTCTCTCTTTTATTTAAAAACAGTGCTTCATTACCATTTGCAAAGGCAGAGGCAGTGCTCCTCCTTCGCTTAGAGTTTATAAAAGCCAGCAACATGATCAATAATTTATACACATGGATAGTAATACAAAAAAATAAGGAATAAAAGCTAAAGATCTAACTACTCCGACCTTCACAATTCCAGCTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAAGCTACTATACAATATGATTCTTAACGAGAG--------------GGGGAGGGAGTTAGAGACTGTCACAAAGCCCTGGGGTGCTTCTCTGGAGATCGCAGGGAAACAGGACCCTGGGCAAGCAGCTCGGGTGTCCTAGGAAGTGACTCTGGGGG-------TGGGGTTGGG-GAGAGAAGGCGAGGTGGTCAATTATACAAGCATCC-CATGTGATGCCCCCATGCCCCAAAAGGTACCTGTTTTGCCATGGCAATGGGAGGGGGGGCAGGAGAAGCTGCATGTTCCATGTTGGGAGGGTCCAGTCCCTGCCATGG----GGAGTGGGGAG-----GAGAGGTTTTGTGGCA-TTTTTAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACGCAGGTAGGTCAGCCTGTCAGGGACAAGTCAACACTACTGGCCCTGTCAGCACTCTGCAGCCCTAGCTTACGTGTGTCGGCCCCAGGTTTGCTCCAGCTATTCACAAGCAGAATTA-AAACACAAGGAAAAAAAAATTCATATCCCTTAGGG-AAAAAAGAGGATCAATTCATCACTCGATATATAATACAGCCAAAATGAGCTGCCAAAACAAGCACACACACACACACAAAAATACTGTGAACAGAAAAATACAAGAAAATGGCTAAGCTGGGGAAGTCTCGATGGGGGTATAGACATTGCTTAAAGCACTTTATCAGTCCCCAGAAAAACCAAACCAAAAGTCATTTTTTAAAAATTCAGAAAACACAAGTACCCCCTGGGAATCTGGCGTTGGTAACT--GGGGTGGGGGTGCGGGTTGGGGGAGAGGAAAGAGAATTGATGATCCCTTTTTGCTTGCCAGTGTGACTG-AGCC---TCTGCCACACTGGCACATGTGTGACTGCCAGCCAGCCGGAGCAGACCGAGCCCC-CCGCTGGCAGTCTCCTTAAAGGCAAGGTTTGAGTTTTGGCTGATGAGCAGTTCTCTCGGTTACCAATCCCTGCCAACCAGCACTACCATGGCTGAATTGATCTACCG--TTTTCCTGAGTAAACTGTAACTGGCTACAGTTCCGGTAACATGGATGAGAAC--AGCTACTACAGCCAACTTGGATTAACTTGAGGAATCCCCTCCA-CCCTCGGC---TCCTCGTTCCTAGTGCGTCTGATTCAGGAATTGGAGAACTTGCCGTAGTCTGGTCTGTAAGCCTTATTT-TAAAGACAGGTGCC-AGGGACTCCACTGCACTCGCTAAACCAGAGGGCACGTGCTGGCTTAGGACACCCGGAGCCTACTTGGAA-AGGGCTCTGCTTCACGCTCTAGCTCTTGGATGGCTATTGCCTGGTTGATCAATAAAGCAAGTATGAAGCAAGTACACAGGAGAAGGGAAAGGGAGGAAAGAGGCTTTTGGACAGTAACATTACCAAAAAAAAAAAAAAAAAAGTGTTCTATGTAACA----GAATCAAGTCTCACTGGTGTATACTACAAATGGTCAGACACTTTCAAGAGCATGACAAAATAAAAATACACAAATTTACGTCTGATGTTCACCTTGCCCACTATTCTTTTTTCCTATCTTAAAACAGTGCAAACAGG-TAACTTATGCTTTTTAAAACACCACTACCCCTTCCCCAC-----CCCCCAAAGTCCCTTTCTTCCTATCATCTGGGGAAAAAAAAATCTGCAATTCTGCAAATGTTACTGTGCTAGAGG-TTGCAAGCAGCAGGA----GGCTGGAGTTAGT-GAGGGAGAGGGCAC----A--AGCAGTTTCC-------CTCCCCGCTCCTGG----CCGGTGTGCCTTCCAGAGGGGCCCCGGCTCGGCCCTGTTCTCCCGTCTGAGGGAAGAGGGGGCAGTTATGAAGCCCTTCTGGCAGAGCCTCGGGGTGGCTTCAATCCCGAGTTGCC----ACCTCTCCCCCATTGGGAAGCTAAGTGACTGGTGATGAG--GGTGGTGCTC-ACCTACTTCTCTGCTATATCACTAGGAACG-------GTAACCTACAGAGCACTTCAGCCCCTGAGCAATTAGACTTTTGAGGAAAAGCTGCTACCACTGGTTTCTACTGAATA-ATCTGCACTAGCTCCCCTTAAAC--AGAGATGAGCCCCAGTCCCCTTCTTTTTTGAGG--------------------ACAAAAATAA--TATTGGCTCAATCCCACCTGTGGTTGTCAGAGGACGGTGGTGATGGGAAGCTGGGTAAAACCTGAGAGCCTTAAAGCCGGTGAGTCACCACGGCTGACCCGGGTTC--TTGGGAGCTGAAAC-ATGGAACGCATGGGATTCCAGACCAGACCTAAGGGCAGCTCTCGGGGCTGAGAGAAGGATA-GGAGATAAAGGTTCTCACTAGTGGTCTCCTTAAAGGAGCCTGGCTTCTAGGAGTAAGACGCTAAGTACAG-AAGCCCATGTCATGAGC----TACAGTAAAGCTGTCAA--TATCATTCACGTGCTGTGATTCAG-ATCAGTGA-TTTTTTGGAATCATCAACCAGCATCCTCTAACGAACCCAC-AGAGGCCAAACTCTCTTCCGACTCTGTTTCTTAGTCCAATGGGAACCAGAGCCAAGAGCAGACAAGCACCGGTGCTTTGAGGAACCTGCCTCTGATGAAGCTGGCTGTACAGAGTCTGAAAGTTCAAA-GGTGATGGGAAGGCTGACACGATCTCATCTAGATGCTCACGAGAGCTCCAATTCTCAGTGCTGACGCCGAAGAGCAGAGGCCCTTG-AGCAAAAGCAGAAGTCTACTTAGCCTTCCTGAGAAAAGGGAGCTGGAGG-AAGCCGTATTACA-ACCATCCCTGGACATGCAGCAGAATG-----------CAAAGAGCTTGCCTATGGAGTCCTCAGCCAGAACCAGCTGAACTGAAATGCAGTAGAGGTAGCCCAAGCTCAAGCTTCTGCCTCTTTTACAAGGGCAGTGGGAGCTGCCTTCTCTACCTTTCCC-ACCATCCTTGTCTTTTTCTTGGAAAAAAGAAGAGGAAATT------ACTCATTCTCCTAACCTCCTCCCCTGCTACAGACACAACCATTTAAAATTTGGCCTTGTCTCCATTGAGCA-GTGCCTTGCCAT-TTCTGTGAATGGCCCCTATTTGAACATGACATGAAATTTCTCCATTTCTTTAGTGAATAAAAGCTCTCTCTCGAAACAAAAAGAAAGAAAAGGAAAAAAATCCTCCCTGCCCCCATTCCCTAGAACTGTGAAAGCCCCAGATCCCATACCCC-TTCCTCTAACTAAAATATTTATATACATACAACAAAAATTGTCTTAA---CAGCAACGAACCAAACTTTGGCTTGGGG-AGGCAA-ACCCTTAACAAAGGCCAATGGCCCTGGGTATTTTGGTGTCCCC-TATTCCATGCATTCCTCCCCAGAATCAATAA-GATTGCATCGAGGCCTCTAGCTTCCTTGATGTCCTTGATGTCTCCCCTCGTTTCAGGGACAGCCTCTCTCTCCATCATCAGGAGAGAGAGGGCTCCCCGGGGGTGGGGGGGGGGGAGATATGTATTTTACACAACAGGCCAGT-CCCTCCCGGATAGATCACTCTGCTTAC-AAAGAATGCTTGATGCTGTCATATGTCAGTCATTTTAATTCAGGGACATGAATCAGTTATCAGTCAAGAACATGTGTGGAGGCAGGAGTA-----------AAAAAAAACAAAAAACAAAAAAAACAACCAACCCCCCCCCCCCAAaaaaaaacccaaaacaaacggaaaacaaacccataacaaaccGGAAGCTCCATGTCTCTGAATTACTCCCTTTAGCAGCTATCCCTCGGGTGAGAAGTCACCCTAGTACCAATGTGAATAGACCAGGGAGCCAAACGGACCGTGCTTTTCTGTTTTCTAATGCCTTCATTTTGGAAATGCTGCAGGACCCTTGCCTTTATCATTAACAGCTAATAGCTAGAAGAGAAACACTTTCTCCCCTACCTTAA-GATGTATAAAAGCAAAGCTGGGGAGCAACAGCAGGGACTCACTCCTGTGGCCACCA-CATGACTCTTTCTGGCAACATAGGAGATCCTTGCCAGGTCACACCTTTCTTCCACTATGGGCGGAGAGAAGCCTCAGGGGCTCTGGGTTTTATGTCCTGTAGTGTTCATGTATGCCAAGTGGT-TACGTGCTTGGTTGGGTGTCTTTGGAGGATAACCAGAAGCCGGGCGGAGCAGTCAGG--AGAGCTCAAGACCGTGGACAGAGAAGTGGCTCACAGAATGCTCCGGAAGATGGAAATTCCTATGGCTTTGGAGCTATTTAGTACAAAGTGCCTCTGCCTGCCCTTACGTGCCCCCTTACAATCACCACAAACTTCCAGGGACAGCCG-CCCA-GGATTGGGTGTTTTACCTTTTGCCAACA-----CTCTTGATATGTTT---ACCTTGTACTGACCTCCTGATGCAAGAGAA----ATCACAGGAATATCAATCAGAGCCCTGCCAGACATCATCCAACA--TCCTTTTTTTCTTCCTTACTC-CTTTACTGGCTCCCAACACTTTGTACTTCTAACCCTCA----------AG-------CCAGAAAAGCTGGTTGC-----TATTTATTCTCCTGTCCCTGGGTCCTAAATTCCTGACTCTTGAGGACTTGGGAGCAGGGAGTTCGTAGAAGGACAGATGAGCTAAGCTGTGGTTCAGAGAAAGGGGAGGAAGCCCAGGAGGAATGCTGAGATCTCAGGAAAGAAAAG-AATGATCTTTTTCATACTCCAGAGTTCATTCTGAGATCTGTTTCCTAATGAGGTGT---TTATTATCCACAGTCTGAGAGCATGTTTGGAAATATTAATACTATAATTCCAAAAACCATGCC-AACTGTCTCAGGCTGTGCAGGTAAGAAGATTGTAAAAAGAAT---GAAGACAGGAGGGAAGAGGAGAGGAAAGTGTCTTTTTAATCCTCCTGCTTCGCAAGCACAAATTCCTATCATCTATCAGCATGTGGATTCCAGCCACAGCCAATCAGAATTGCCTGCC-AAAGACCAGAAACTC--------AGAAGAATATCCTGTCGCAGAAAGATTTCCTCCACTTCTGCTCAT--CCCCAGCCACTCAGCACCCGATACACTTTGGTAGCTCTGT---CTGATTTCTGATCGCATGCATTCATCAGCTCCTAAG i canFam3.chr10 C 0 C 0 a score=20709.000000 s hg38.chr22_KI270876v1_alt 64847 8 + 263666 GTCTCTCC s panTro4.chr22 34442496 8 + 49737984 GTCTCTCC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30858656 5 + 46535552 ---TCTCC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100411096 8 - 115148730 GTCTCTCC i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 80985724 8 - 96509753 AGCTCTCC i macFas5.chr10 I 6 C 0 s papAnu2.chr10 76241423 8 + 90941950 gtctctcc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18512310 8 + 33263144 GCCTCTCC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198217178 8 + 210400635 GTCTCTCC i calJac3.chr1 C 0 C 0 s canFam3.chr10 40842039 8 - 69331447 GTCTCCCC i canFam3.chr10 C 0 C 0 e mm10.chr15 77083729 0 + 104043685 C e rheMac3.chr10 80558884 11 + 95678458 I a score=430764.000000 s hg38.chr22_KI270876v1_alt 64855 105 + 263666 TTCCTCCTTGACTGCCTCTTCCGTGATTGATAGAATAAGCTAAGCACGGACATACAGACATGGAAATGCATTA-----TTATTTTTTTTTTTACCACAGTTT----aaaaaaaa------- s panTro4.chr22 34442504 104 + 49737984 TTCCTCCTTGACTGCCTCTTCCGTGATTGATAGAATAAGCTAAGCACGGACATACAGACATGGAAATGCATTA-----TT-TTTTTTTTTTTACCACAGTTT----AAAAAAAA------- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30858661 104 + 46535552 TTCCTCCTTGACTGCCTCTTCCGTGATTGATAGAATAAGCTAAGCACGGACATACAGACATGGAAATGCATTA-----TT-TTTTTTTTTTTACCACAGTTT----AAAAAAAA------- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100411104 104 - 115148730 TTCCTCCTTGACTGCCTCTTCCGTGATTGATAGAATAAGCTAAGCACGGACATACAGACATGGAAATGCATTA-----TT-TTTTTTTTTTTACCACAGTTT----aaaaaaaa------- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80558895 108 + 95678458 TCCCTCCTTGACTGCCTCTTCCGTGATTGATAGAATAAGCTAAGCACGGACGTACAGACATGGAAATGCattaatt-ttt-tttttttttttaCCACAGTTT----AAAAAAAA------- i rheMac3.chr10 I 11 C 0 s macFas5.chr10 80985732 104 - 96509753 ---CTCCTTGACTGCCTCTTCCGTGATTGATAGAATAAGCTAAGCACGGACGTACAGACATGGAAATGCATTAA-T-TTT-TTTTTTTTTTTACCACAGTTT----aaaaaaaa------- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76241431 108 + 90941950 ttcctccttgacTGCCTCTTCCGTGATTGATAGAATAAGCTAAGCACGGACGTACAGACATGgaaatgcattaa-t-ttt-tttttttctttaccacagttt---aaaaaaaaa------- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18512318 108 + 33263144 TCCCTCCTTGCCTGCCTCTTCCGTGACTGACAGAATAAGCTAAGCACGGACATACAGACATGGAAATGCATTA--T-TTT-TTTTTTTTTTTACCACAGTTT--aaaaaaaaaa------- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198217186 110 + 210400635 TTCCTCTTTGACTGCCTCTTCCATGATTGACAGAATAAGCTAAGCACGGACATACAGACATGGAAATGCATTA--T-TAT-TATTTTTTTTTACCACAGTTTAAAGAAAAAAGA------- i calJac3.chr1 C 0 C 0 s mm10.chr15 77083729 106 + 104043685 -TCCTCCTCGACTGTCTCCTCTGTGACCAACAGAATAAGCTAAGTGTGGACATACAGACGTGGAAATGCACTA--TCTTT-TTTTttttttaaccacagttt----taaaaaaa------- i mm10.chr15 C 0 I 107 s canFam3.chr10 40842047 112 - 69331447 TTCCTCAGTAACTGCCTCTTCCGTGATTGACAGAATAAGCTAAGCACGGACATACAGACATGGAAATGCATTA----TTT-TTTTTTTTTTTACCACAGTTa----aaaaaaaagaaaaaa i canFam3.chr10 C 0 C 0 a score=1348035.000000 s hg38.chr22_KI270876v1_alt 64960 288 + 263666 aaa-gaaaaaaaTGCACAATCTTTGGAACAAAAGAATTAAAGGCAGAAATTTAAAGG-AAAAATACATATTCAAAGAACATAGTGAGGTATAAAAAAGTAttctttctttttttgtg--ttttttttt----gtttgtttgtttgtttttCCTCTTCATCTTGCTATAGAGTTCCTCTACTAGTAAATATTGCAATAGCCAGGCCTCATGAACTGGGGGGCTGTCCCATTTGCAGGGGTCTCACGTCACTTCAGTAGGGGGCAAATCGGCTGTAGCCACCTCGGTATAAACTCGCC s panTro4.chr22 34442608 290 + 49737984 AAAAGAAAAAAATGCACAATCTTTGGAACAAAAGAATTAAAGGCAGAAATTTAAAGG-AAAAATACATATTCAAAGAACATAGTGAGGTATAAAAAAGTAttctttctttttttgtg--ttttttttt---tgtttgtttgtttgtttttcctcttCATCTTGCTATAGAGTTCCTCTACTAGTAAATATTGCAATAGCCAGGCCTCATGAACTGGGGGGCTGTCCCATTTGCAGGGGTCTCACGTCACTTCAGTAGGGGGCAAATCGGCTGTAGCCACCTCGGTATAAACTCGCC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30858765 289 + 46535552 AAA-GAAAAAAATGCACAATCTTTGGAACAAAAGAATTAAAGGCAGAAATTTAAAGG-AAAAATACATATTCAAAGAACATAGTGAGGTATAAAAAAGTATTCTTTCTTTTTTTGtg--ttttttgtt---tgtttgtttgtttgtttttCCTCTTCATCTTGCTATAGAGTTCCTCTACTAGTAAATATTGCAATAGCCAGGCCTCATGAACTGGGGGGCTGTCCCATTTGCAGGGGTCTCACGTCACTTCAGTAGGGGGCAAATCGGCTGTAGCCACCTCGGTATAAACTCGCC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100411208 285 - 115148730 aaaagaaaaaaaTGCACAATCTTTGGAACAAAAGAATTAAAGGCAGAAATTTAAAGG-AAAAATACATATTCAAAGAACATAGTGAGGTATAAAAAAGTAttctttctttttttgtg--ttttttttt--------gtttgtttgtttttCCTCTTCATCTTGCTATAGAGTTCCTCTACTAGTAAATATTGCAATAGCCAGGCCTCATGAACTGGGGGGCTGTCCCATTTGCAGGGGTCTCACGTCACTTCAGTAGGGGGCAAATCGGCTGTAGCCACCTCGGTATAAACTCGCC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80559003 287 + 95678458 AAA-GAAAAAAATGCACAATCTTTGGAACAAAAGAATTAAAGGCAGAAATTTAAAGGAAAAAATACATATTCAAAGAACATAGTGAGGTATAAAAAAGTAttctttctttttttgtg-tttttttttt-------tgtttgtttgtttttcctcttCATCTTGCTATAGAGTTCCTCTACTAGTAAATATTGCAATAGCCAGGCCTCATGAACTGGGGGGCTGTCCCATTTGCAGGGGTCTCACGTCACTTCAGTAGGGGGCAAATCGGCTGTAGCCACCTCGGTATAAACTCGCC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80985836 288 - 96509753 aaa-gaaaaaaaTGCACAATCTTTGGAACAAAAGAATTAAAGGCAGAAATTTAAAGGAAAAAATACATATTCAAAGAACATAGTGAGGTATAAAAAAGTAttctttctttttttgtgttttttttttt-------tgtttgtttgtttttCCTCTTCATCTTGCTATAGAGTTCCTCTACTAGTAAATATTGCAATAGCCAGGCCTCATGAACTGGGGGGCTGTCCCATTTGCAGGGGTCTCACGTCACTTCAGTAGGGGGCAAATCGGCTGTAGCCACCTCGGTATAAACTCGCC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76241539 285 + 90941950 aaa-gaaaaaaatgcacaatCTTTGGAACAAAAGAATTAAAGgcagaaatttaaagg-aaaaatacatattcaaagAACATAGTGAGGTATAAaaaagtattctttctttttttgtg--ttttttttt-------tgtttgtttgtttttcctcttcatcTTGCTATAGAGTTCCTCTACTAGTAAATATTGCAATAGCCAGGCCTCATGAACTGGGGGGCTGTCCCATTTGCAGGGGTCTCACGTCACTTCAGTAGGGGGCAAATCGGCTGTAGCCACCTCGGTATAAACTCGCC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18512426 285 + 33263144 aaa-gaaaaaaaTGCACAATCTTTGGAACAAAAGAATTAAAGGCAGAAATTTAAAGG-AAAAATACATATTCAAAGAACATAGTGAGGTATAAAAAAGTAttctttctttttttgtg--ttttttttt-------tgtttgtttgtttttCCTCTTCATCTTGCTATAGAGTTCCTCTACTAGTAAATATTGCAATAGCCAGGCCTCATGAACTGGGGGGCTGTCCCATTTGCAGGGGTCTCACGTCACTTCAGTAGGGGGCAAATCGGCTGTAGCCACCTCGGTATAAACTCGCC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198217296 283 + 210400635 AAA-GAAAAAAATGCACAATCTTTGAAACAAAAGAATTAAAGGCAGAAATTTAAAGG-AAAAATACATATTCAAAGAACATAGTGAGGTAT-AAAAAGTATTCtttctttttttgtg--tgttttttt--------gtttgtttgtttTTCCTCTTCATCTTGCTATAGAGTTCTTCTACTAGTAAATATTGCAATAGCCAGGCCTCATGAACTGGGGGGTTGTCCCATTTGCAGGGGTCTCACGTCACTTCAGTAGGGGGCAAATCGGCTGTAGCCACCTCGGTATAAACTCGCC i calJac3.chr1 C 0 I 613 s mm10.chr15 77083942 265 + 104043685 aaa-acaaaaaaagcacaatctttggaacaaaagaattaaaggcagaaatttaaaggaaaaaatacatattcaaagaaCATAGTGAGGTATAAAAAAGTATTC----------------TCTCTTTTT-------TGTTTG-----TTTTCCTCTTCATCTTGCTATAGAG-TCCTCTACTAGTAAATATTGCAATAGCCAGGCCTCATGAACT-GGGGGCTGTCCCATTTGCAGGGGTCTCACGTCACTTCAGTAGGGGGCAAATCGGCTGTAGCCACCTCGGTACAAACTCGCC i mm10.chr15 I 107 C 0 s canFam3.chr10 40842159 291 - 69331447 aaa-agaaaaaaTGCACAATCTTTGGAACAAAAGAATTAAAGGCAGAAATGTAAAGG-AAAAATACATATTCAAAGAACATAGTGAGGTATAAAAAAGTATTCTCTCtttttttttg--ttttttttgttttttttttttgtttgtttttCCTCTTCATCTTGCTATAGAGTTCCTCTACTAGTAAATATTGCAATAGCCAGGCCTCATGAACTGGGGGGCGGTCCCATTTGCA-GGGTCTCACGTCACTTCAGTAGGGGGCAAATCGGCTGTAGCCACCTCGGTATAAACTCGCC i canFam3.chr10 C 0 C 0 a score=1616500.000000 s hg38.chr22_KI270876v1_alt 65248 592 + 263666 TGCAGTAATTAAAGAGATAAAAATAATTAAAAG---------------------GTTGATGAGAGAAGCATTAACAGTGAAGAAAAATGTCCAGAGAGGG-ATCTAGAAACA--GCCTGCTTCGAAGCCTCAAAGCAACTGATCAAGCATTGCCTTGTGCAGTGAAGTCAGGAAACCAACTTCTGCTTCTAAGGTGCTCAGACCAGAGCCCAACACATTTATTGCTGACCTGATATTCTCAAG--GAGAGTATGACGACATTTTATTTCATTATTTACATGAATTAGCACAGAAGGGAAACAATACACAGTTGAAAACAAGTTCTGCAAAGAGTTTGATTTTTAAAAGCACAGGTTTTTGTTTACCTTGA-TACAGCC-TTATAATCCTGGTGGAAAACAGATCACCAGTTTCTCCTTCTCACATATGACCCATCGGCAGTGCAC-GTTACTTCTGACACGATCCCTGCCATGTGTGGTCACAGCCCATGTTTGAGATGGTGCCACATCTAAACCTGAGCCAGTCTT----T-----AATAAAGTCTGTTTCCTCTATC----ATCTACGAAGCACACCAACTAGGCTGTTTCTTGA-CATATTCACA------TTTACATATCTAGCTGGGGTTTTAACT s panTro4.chr22 34442898 594 + 49737984 TGCAGTAATTAAAGAGATAAAAATAATTAAAAG---------------------GTTGATGAGAGAAGCATTAACAGTGAAGAAAAATGTCCAGAGAGGG-ATCTAGAAACACAGCCTGCTTCAAAGCCTCAAAGCAACTGATCAAGCATTGCCTTGTGCAGTGAAGTCAGGAAACCAACTTCTGCTTCTAAGGTGCTCAGACCAGAGCCCAACACATTTATTGCTGGCCTGATATTCTCAAG--GAGAGTATGACGACATTTTATTTCATTATTTACATGAATTAGCACAGAAGGGAAACAATACACAGTTGAAAACAAGTTCTGCAAAGAGTTTGATTTTTAAAAGCACAGGTTTTTGTTTACCTTGA-TACAGCC-TTATAATCCTGGTGGAAAACAGATCACCAGTTTCCCCTTCTCACATATGGCCCATCGGCAGTGCAC-GTTACTTCTGACACGATCCCTGCCATGTGTGGTCACAGCCCACGTTTGAGATGCTGCCACACCTAAACCTAAGCCAGTCTG----T-----AATAAAGTCTGTTTCCTCTATC----ATCTACGGAGCACACCAACTAGGCTGTTTCTTGA-CATATTCACA------TTTACATATCTAGCTGGGGTTTTAACT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30859054 594 + 46535552 TGCAGTAATTAAAGAGATAAAAATAATTAAAAG---------------------GTTGATGAGAGAAGCATTAACAGTGAAGAAAAATGTCCAGAGAGGG-ATCTAGAAACACAGCCTGCTTCGAAGCCTCAAAGCAACTGATCAAGCATTGCCTTGTGCGGTGAAGTCAGGAAACCAACTTCTGCTTCCAAGGTGCTCAGACCAGAGCCCAGCACATTTATTGCTGACCTGATATTTTCAAG--GAGAGTATGATGACATTTTATTTCATTATTTACATGAATTAGCACAGAAGGGAAACAATACACAGTTGAAAACAAGTTCTGCAAAGAGTTTGATTTTTAAAAGCACAGGTTTTTGTTTACCTTGA-TATAGCC-TTATAATCCTGGTGGAAAACAGATCACCAGTTTCCCCTTCTCACATATGATCCACCGGCAGTGCAC-GTTACTTCTGACACGATCCCTGCCATGTGTGCTCACAGCCCATGTTTGAGATGGTGCTGCATCTAAACCTGGGCCAGTCTT----T-----AATAAAGTCTGTTTCCTCTATC----ATCTACGAAGCACACCAAGTAGGCTGTTTCTTGA-CATATTCACA------TTTATATATCTAGCTGGGGTTTTAACT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100411493 596 - 115148730 TGCAGTAATTAAAGAGATAAAAATAATTAAAAG---------------------GTTGATGAAAGAAGCATTAACAGTGAAGAAAAATGTCCAGAAAGGG-ATCTAGAAACACAGCCTGCTTTGAAGCCTCAAAGCAACTGATCAAGCATTGCCTTGTGCAGTGAAGTCAGGAAACCAACTTCTGCTTCTAAGGTGCTCAAACCAGAGCCCAATATATTTATTGCTGACCTGATATTCTCAAG--GAGAGTATGACGACATTTTATTTCATTATTTACATGAATTAGCACAGAAGGGAAACAATACACAGTTGAAAACTAGTTCTGCAAAGAGTTTGATTTTTAAAAGCACAGGTTTTTGTTTACCTTGA-TACAGCC-TTATAATCCTGGTGGAAAACAGACCACCAGTTTCCCCTTCTCAAATATGACCCATCGGCAGTGCAC-GTTACTTCTGACACGATCCCTGCCATGTGTGGTCACAGCCC--GTTTGAGATGGTGCCGCATCTAAACCTGAGCCAGTCTT----T-----AATAGAGTCTGTTTCCTCTATCATCTATCTACGAAGCACACCAACTAGGCTGTTTCTTGA-CACATTCACA------TTTATATATCTAGCTGGGGTTTTATCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80559290 592 + 95678458 TGCAGTAATTAAAGAGATAAAAATAATTAAAAG---------------------GTTGATGAGAGAAGCATTAACAGTGAAGAAAAATGTCCAGAGAGGG-ATTTGGAAACACAGCCTCCTTCAAAGCCTCAAAGCAACTGATCAAGCATTGCCTTGTGCAGTAAAGTCA-GAAACCAACTTCTGCTTGTGAGGTGCTCACACCAGAGCCCAACACATTTACTGCTGACCTGATATTCTCAAA--GAGAGTATGACAACATTTCATTTCATCATTTACATGAATTAGCACAGAAGGGAAACAATATACAGTTGAAAACTAGTTCTGCCAAGAGTGTGATTTTTAAAAGCACAGGTTTTTGTTTACCTTGA-TACAGCC--TATAATCCTGGTGGAAAACACATCCCCAGTTTCCCCTTCTCACATATGACCCATCTGCAGTGCAC-GTTACTTCCGACACGATCCCTGCCATGTGCGGTCACAGCCCACGTTTGAGATGGTGCTGCATCTAAACCTGAGTCAGTCTT----T-----AATAAAGTCTAGTTCCTCTATC----ATCCACAAAGCACACCAACTAGGCTGTTTCTTGA-CATATTCACA------TTTATATATCTAGTTGGGGTTTTAACT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80986124 592 - 96509753 TGCAGTAATTAAAGAGATAAAAATAATTAAAAG---------------------GTTGATGAGAGAAGCATTAACAGTGAAGAAAAATGTCCAGAGAGGG-ATTTGGAAACACAGCCTCCTTCAAAGCCTCAAAGCAACTGATCAAGCATTGCCTTGTGCAGTAAAGTCA-GAAACCAACTTCTGCTTGTGAGGTGCTCACACCAGAGCCCAACACATTTACTGCTGACCTGATATTCTCAAA--GAGAGTATGACAACATTTCATTTCATCATTTACATGAATTAGCACAGAAGGGAAACAATATACAGTTGAAAACTAGTTCTGCCAAGAGTGTGATTTTTAAAAGCACAGGTTTTTGTTTACCTTGA-TACAGCC--TATAATCCTGGTGGAAAACACATCCCCAGTTTCCCCTTCTCACATATGACCCATCTGCAGTGCAC-GTTACTTCCGACACGATCCCTGCCATGTGCGGTCACAGCCCACGTTTGAGATGGTGCTGCATCTAAACCTGAGTCAGTCTT----T-----AATAAAGTCTAGTTCCTCTATC----ATCCACAAAGCACACCAACTAGGATGTTTCTTGA-CATATTCACA------TTTATATATCTAGTTGGGGTTTTAACT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76241824 591 + 90941950 TGCAGtaattaaagagataaaaataattaaaag---------------------gttGATGAGAGAAGCATTAACAGTGAAGAAAAATGTCCAGAGAGGG-ATCTGGAAACACAGCCTCCTTCAAAGCCTCAAAGGAACTGATCAAGCATTGCCTTGTGCAGTAAAGTCA-GAAACCAACTTCTGCTTGTGAGGTGCTCACACCAGAGCCCAACACATTTACTGCTGACCTGATATTCTCAAA--GAGAGTATGACGACATTTCATTTCATCATTTACATGAATTAGCACAGAAGGGAAACAATATACAGTTGAAAACTAGTTCTGCCAagagtgtgatttttaaaagcacaggTTTTTGTTTACCTTGA-TACAGCC--TATAATCCTGGTGGAAAACACATCCCCAGTTTCCCCTTCTCACATATGACCCATCTGCAGTGCAC-GTTACTTCCGACACGATCCCTGCCATGTGCGGTCACAGCCCATGTTTGAGATGGTGCTGCATCTAAACCTGAGTCAG-CCT----T-----AATAAAGTCTAGTTCCTCTATC----ATCTACAAAGCACACCAACTAGGCTGTTTCTTGA-CATATTCACA------TTTATATATCTAGCTGGGGTTTTAACT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18512711 590 + 33263144 TGCAGTAATTAAAGAGATAAAAATAATTAAAAG---------------------GTTGATGAGAGAAGCATTAACAGTGAAGAAAAATGTCCAGAGAGGG-ATTTGGAAACACAGCCTCCTTCAAAGCCTCAAAGCAACTGATCCAGCATTGCCTTGTGCAGTAAAGTCA-GAAACCAACTGCTGCTTCTAAGGTGCTCAAACCAGAGCCCAACACATTTACTGCTGACCTGATATTCTCAAA--GAGAGTATGACGACATTCCATTTCATCATTTACATGAATTAGCACAGAAGGGAAACAATATACAGTTGAAAACTAGTTCTGCCAAGAGTATGATTTTTAAAAGCACAGGTTTTTGTTTACCTTGA-TACAGCC--TATAATCCTGGTGGAAAACACATCCC--GTTTCCCCTTCTCACATATGACCCATCTGCAGTGCAC-GTTACTTCCGACACGATCCCTGCCACGTGCGGTCACAGCCCATGTTTGAGATGCTGCTGCATCTAAACCTGAGTCAGTCTT----T-----AATAAAGTCTAGTTCCTCTATC----ATCTACAAAGCACACCAACTAGGCTGTTACTTGA-CATATTCACA------TTTATATATCTAGCTGGGGTTTTAACT i chlSab2.chr19 C 0 C 0 s mm10.chr15 77084207 413 + 104043685 TGCAGTAAGTAGAGACATAAGAATATTGAAAGA---------------------G----TGAGAAAAGCATAGGAAATGAAGCAAGATGTCCAGAGAGG------------ACAACTCTCT-------CTCCTGGCAACCAG----------------ACAGTGGAGACA---------------------------TCACA------------------ATGGCTGACTTCA--------------------------------------CAATTATATGACTAGGCACAGAGAGTGGAC----------------------CTG------ATATGGTTTCTATATGC--------CTATCTGTCTTTG-TAATGCTGCTACAGTCCTGGCTGAAACTGGATTGCTGACCTC-CCTTCAAACATATGAC----TGTCAGAGTGT-GCTACCTTTGAC-TACTTCTTGGTAGAGGTGGTCACATCCTGTGTTCAGGATGATGCCACATTTAAACCCAAGATAATTTT----TCAACCAATGAAACAGATCTCCTCTATA----ATCTATAAAATAca--------gttgtttctc-----------------------tgtatcca--tggggtactgatt i mm10.chr15 C 0 I 352 s canFam3.chr10 40842450 610 - 69331447 TGCAGTAATTAAAGACACAAAAAGAATTAAAAGTTGTtttttttttttgtttttgtttttgAGAGAAGCACTGAAAATGAAGGAAAATGTCCTGAAAAGGAATTTGGAAAAATAGCTTCTTTAGAAGCTGCAAAGCAACTGGTAAGATGCTAC------CAGTGGAGTCAGGAAACCAGCTTCTGCCTCTAAGATGCTCAAACCAGAGTCC----CACTTACTAGTGACCGGACACGCTCAAGAAGAGAGGATGGCAATGCTTTGTTTCATTATTTACATGAATCAGCACAGAAGGGAAACTCAATACAATTTAAAGCCAGGTCTGTAAATAGTGTGACGTTTAAAAGCAACAGGTTTTGTTTACTTTGATTACATCA-TCACAATCGTGACCTAAAGCAGCTAGCTGATTTCACCTTCATACACATCACCTGTCCATGGAGAACTGGCTCCTCTGAT-----------CACTAGCTGTCACGTACCATGTCTGAGATGGTGCTGGATTTAAACCAGAGTCAACCTTGCACT-----CATCAAGTCCAGCTCCTCTCTG----GTCTATAAAATATGCCAACTATGCTGCTTCTGGATCATACCCGAATGTATTTCTATCTATCTCTGTGGAGTTATAACT i canFam3.chr10 C 0 C 0 e calJac3.chr1 198217579 613 + 210400635 I a score=38980.000000 s hg38.chr22_KI270876v1_alt 65840 12 + 263666 AGGCTTTATTCC s panTro4.chr22 34443492 12 + 49737984 AGGCTTTATTCC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30859648 12 + 46535552 AGGCTTTATTCC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100412089 12 - 115148730 AGGCTTTACTCC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80559882 12 + 95678458 AGGCTTTATTCC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80986716 12 - 96509753 AGGCTTTATTCC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76242415 12 + 90941950 AGGCTTTATTCC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18513301 12 + 33263144 AGGCTTTATTCC i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40843060 12 - 69331447 GGGCTTTATTCC i canFam3.chr10 C 0 C 0 e mm10.chr15 77084620 352 + 104043685 I e calJac3.chr1 198217579 613 + 210400635 I a score=890361.000000 s hg38.chr22_KI270876v1_alt 65852 293 + 263666 TTTATGTTTAT---CAAATGACTTTATCTAATGGCTTATCTCTTTCAATTAGAAGTTT-CCCAGGAATGCATCTTTCTCAGGTCATTCTTTTAGCATAGGACTTATATCATTTTAGGACGAAATACAACCTCAGGCACTTCTACCACTGCCGTTATATTGTAATGCTCTACTTCATTTATAAACATATATTCCCTCAGGGCCCCCTATTACTTCCTTCCACAAATCTT--CATCAGTAGAAATTTGGTGTGAGAAGTAGC----TTTCTCATATTCCTTTAGGTCTTACATTTTACATTTCAT s panTro4.chr22 34443504 293 + 49737984 TTTATCTTTAT---CAAATGACTTTATCTAATGGCTTATCTCTTTCAATTAGAAGTTT-CCCAGGAATGCATCTTTCTCAGGTCATTCTTTTAGCATAGGACTTCTATCATTTTAGGACGAAATACAACCTCAGGCACTTCTACCACTGCCGTTATATTGTAATGCTCTACTTCATTTATAAACATATATTCCCTCAGGGCCCCCTATTACTTCCTTCCACAAATCTT--CATCAGTAGAAATTTGGTGTGAGAAGTAGC----TTTCTCATATTCCTTTAGGTCTTACATTTTACACTTCAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30859660 293 + 46535552 TTTATCTTTAT---CAAATGACTTTATCTAATGGCTTATCTCTTTCAATTAGAAGTTT-CCCAGGAATGCATCTTTCTCAGGTCATTCTTTTAGCATAGGACTTATATCATTTTAGGACGAAATACAACCTCAGGAACTTCCACCACTGCCTTTATACTGTAATGCTCTACTTCATTTATAAACATATATTCCCTCAGGGCCCCCTATTACTTCCTTCCACAAATCTT--CATCAGTAGAAATTTGGTGTGAGAAGTAGC----TTTCTCATATTCCTTTAGGTTTTACATTTTACACTTCAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100412101 293 - 115148730 TTTATCTTTAC---CAAATGACTTTATCTAATGGCTTATCTCTTTCAATTAGAAGTTT-CCCAGGAATGCATCTTTCTCAGGTCATTCTTTTAGCATAGGACTTATATCAGTTTAGGAGGAAATACAACCTCAGGAACTTCCACCACTGCCTTTATATTGTAATGCTCCACTTCATTTATAAACATATATTCCCTCAGGGCCCCCCATTACTTCCTTCCGCAAATCTT--CATCAGTAGAAATTTGGTGTGAGAAGTAGC----TTTCTCATATTCCTTTAGGTCTTACATTTTATACTTCAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80559894 286 + 95678458 ATTAT---------CAAATGACTTTATCTAATGGCTTATCTCTTTCAATTACAAGTTT-CCCAGGAATGCATCTTTCTCAGGTCATTCTTTTAGCATAGGACTTATATCATTTTAGGACAAAATAAAACCTCAGGAACTTCCACCACTGCCTTTATATTGTACTGCTCTACTTCCCTTACAAACATACATTCCCTCAGGG-CCCCTATTCCTTCCTTCCACAAATCTT--CATCAGTAGAAATCTGGTGTGAGAAGTAAC----TTCCTCATATTCCTTTAGGTCTTACATTTTACACTTCAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80986728 286 - 96509753 ATTAT---------CAAATGACTTTATCTAATGGCTTATCTCTTTCAATTACAAGTTT-CCCAGGAATGCATCTTTCTCAGGTCATTCTTTTAGCATAGGACTTATATCATTTTAGGACAAAATAAAACCTCAGGAACTTCCACCACTGCCTTTATATTGTACTGCTCTACTTCCCTTACAAACATACATTCCCTCAGGG-CCCCTATTCCTTCCTTCCACAAATCTT--CATCAGTAGAAATCTGGTGTGAGAAGTAAC----TTCCTCATATTCCTTTAGGTCTTACATTTTACACTTCAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76242427 287 + 90941950 TTTAT---------CAAATGACTTTATCTAATGGCTTATCTCTTTCAATTACAAGTTT-CCCAGGAATGTATCTTTCTCAGGTCATTCTTTTAGCATAGGACTTATATCATTTTAGGACAAAATAAAACCTCAGGAACTTCCACCACTGCCTTTATATTGTAATGCTCTACTTCACTTACAAACATATATTCCCTCAGGGCCCCCTATTACTTCCTTCCACAAATCTT--CATCAGTAGAAATCTGGTGTGAGAAGTAAC----TTCCTCATATTcctttaggtcttacattttacacttctt i papAnu2.chr10 C 0 I 222 s chlSab2.chr19 18513313 287 + 33263144 TTTAT---------CAAATGACTTTATCTAATGGTTTATCTCTTTCAATTACAAGTTT-CCCAGGAATGTATCTTTCTCAGGTCATTCTTTTAGCATAGGACCTATATCATTTTAGGACAAAATAAAACCTCAGGAACTTCCACCACTGCCTTTATATTGTAATGCTCTACTTCACTTACAAACATATATTCCTTCAGGGCCCCCTATTACTTCCTTCCACAAATCTT--CATCAGTAGAAATCTGGTGTGAGAAGTAAC----TTCTTCATATTCCTTTAGGTCGTACATTTTACACTTTAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198218192 297 + 210400635 TTTATATATATATATATATGACTTTATCTAACGGCTTATCTCTTTCAGTTAGAAGTTTGGCCAGGAATGTATCATTCTCAGGCCATTCTTTTAGCATAGGACTTACATTATTTTAGGATGAAAGAAAACCTCAGGAACTTCCACCACTGTCTTTATAATGTAATGCTCTACTTCACTTACAAACACATATTCACTCAGGACCCCCTATTACTTCCTTCTGCAAATCTT--CATCAGTAGAAATCTGGTGTGGGAAGTGCC----TTTCTCATATTCCTGTAGGTCTTACATTTTACACTTCAT i calJac3.chr1 I 613 C 0 s canFam3.chr10 40843072 196 - 69331447 -------------------------------------------------------TTT-ATCAGGA------------------------TCAGCAC-------------------------ATAAAATCTCAGGAACTTTCATCACGGTCTTTATCTTGTCTGTCTCTACCTCAACTCCACACCTACTTCCCCTCAGGA--TCCTGTTACTTCCCCCCACAAATCTTTCTATCCATAGAAACTGAATGGAAGAAATGACAGGTTATCTCATATTCCTCTAAATCTTAAATTTCATATATCAC i canFam3.chr10 C 0 C 0 e mm10.chr15 77084620 352 + 104043685 I a score=260136.000000 s hg38.chr22_KI270876v1_alt 66145 88 + 263666 TCTGTCTCCTTTTCAAACAACTCTACCCATGTCCAGAGGTAGTTGCCCAGTTGCATTTTGGATTAGAGAGAAAGCCCTGGCA----GAGGTG s panTro4.chr22 34443797 88 + 49737984 TCTGTCTCCTTTTCAAACAACTCTGCCCATGTGCAGAGGTAGTTGCCCAGTTGCATTTTGGATTAGAGAGAAAGCCCTGGCA----GAGGTG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30859953 87 + 46535552 TCTGTCTCCTTTTCAAACAACTCTGCCCATGTCCAGAGGTAGTTGCCCAGTTGCATTTTGGATTAGAGAGCAAG-CCTGGCA----GAGGTG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100412394 87 - 115148730 TCTGTCTCCTTTTCAAACAACTCTGCCCATGTTCAGAGGTAGTTGCCCAGTTGCATTTTGGATTAGAGAGCAAG-CCTGGCA----GAGGTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80560180 86 + 95678458 TCTGTCTCCTTTTCAAACAACTCTG-CCATGTTCAGAGGCAGCTGCCCAGTTGCATTTTGAATTAGAGAGCAAG-GCTGGCA----GAGGTG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80987014 86 - 96509753 TCTGTCTCCTTTTCAAACAACTCTG-CCATGTTCAGAGGCAGCTGCCCAGTTGCATTTTGAATTAGAGAGCAAG-GCTGGCA----GAGGTG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76242936 86 + 90941950 tctGTCTCCTTTTCAAACAACTCTG-CCATGTTCAAAGGCAGCTGCCCAGTTGCATTTTGAATTAAAAAGCAAG-GCTGGCA----GAAGTG i papAnu2.chr10 I 222 C 0 s chlSab2.chr19 18513600 86 + 33263144 TCTGTCTCCTTTTCAAACAACTCTG-CCATGTTCAGAGGCAGCTGCCCAGCTGCATTTTGAATTAGAGAGCAAG-GCTGGCA----GAGGTG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198218489 91 + 210400635 TCTGTCTCCTTTTCAAACAACTTTGCCCATATTCAGAGGTAGCTGCCCAGCTGCATTTTGGATTAGAGAGCAAG-CCTGGCATGCGGAGGTG i calJac3.chr1 C 0 C 0 s canFam3.chr10 40843268 68 - 69331447 TCTGCCTCCCTGTCAAACACCTCCTTCCACATTCCCAGGCTGCAGCCCAGCTG-------------AGAAC----ACTGG-G----GAGG-- i canFam3.chr10 C 0 C 0 e mm10.chr15 77084620 352 + 104043685 I a score=600614.000000 s hg38.chr22_KI270876v1_alt 66233 190 + 263666 TCACTGTGGAATGGCCTGTCTTTGTTGCAGCCTGTGAGTCCTAATCACTGAA-ACTGGAGGCATCCAAGCCAACACAATAA-------TACTGCAGTGAG-----GTGGTTGGTCAGAA--------------------GAAAT----TATGCT-----AGTTCTATGGACTTCTTCGATACTTCTATCAACAACACCATATTTTGCCACAATTGTTATCAATAATCAA---TAA s panTro4.chr22 34443885 190 + 49737984 TCACTGTGGAATGGCCTGTCTTTGTTGCAGCCTGTGAGTCCTAATCACTGAA-ACTGGAGGCATCCAAGCCAACACAATAA-------TACTGCAGTGAG-----GTGGTTGGTCAGAA--------------------GAAAT----TATGCT-----AGTTCTATGGACTTCTTCGATACTTCTATCAACACCACCATATTTTGCCACAATTGTTATCAATAATCAA---TAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30860040 190 + 46535552 TCACTGTGGAATGGCCTGTCTTTGTTGCAGCCTGTGAGTCCTAATCACTGAA-ACTGGAGGCATCCAAGCCAACACAATAA-------TACTGCAGTGAG-----GTGGTTGGTCAGAA--------------------GAAAT----TATGCT-----AGTTCTATGGACTTCTTCGATACTTCTATCAAAAACACCATATTTTGCCACAACTGTTATCAATAATCAA---TAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100412481 190 - 115148730 TCACTGTGGAATGGCCTGTCTTTGTTGCAGCCTGTGAGTCCTAATCACTGAA-ACTGGAGGCATCCGAGCCAACACAATAA-------TATTGCAGTAAG-----GTGGTTGGTCAGAA--------------------GAAAT----TATGCT-----AGTTCTATGGACTTCTTCGATACTTCTATCAAAAACACCATATTTTGCCACAATTGTTATCAATAATCAA---TAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80560266 186 + 95678458 TCACTGTGGAACGGCCTACCTTTGTTGCAGCCTGTGAGTCCTAATCACTGAA-ACTGGAGGCACCGAAGCCAACACAATAA-------TGTTGCAGTGAG-----GTGGTTGGTCAGAA--------------------GAAAT----TATGCT-----AGTTCTACAGACTTCTTCGATACTT-TATCAAAAACACTATATTTTGCCACAGTTGTTATCAATAATCAA------ i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80987100 186 - 96509753 TCACTGTGGAACGGCCTACCTTTGTTGCAGCCTGTGAGTCCTAATCACTGAA-ACTGGAGGCACCGAAGCCAACACAATAA-------TGTTGCAGTGAG-----GTGGTTGGTCAGAA--------------------GAAAT----TATGCT-----AGTTCTACAGACTTCTTCGATACTT-TATCAAAAACACTATATTTTGCCACAGTTGTTATCAATAATCAA------ i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76243022 189 + 90941950 TCACTGTGGAACGGCCTACCTTTGTTGCAGCCTGGGAGTCCTAATCACTGAA-ACTGGAGGCACCGAAGCCAACACAATAA-------TGCTGCAGTGAG-----GTGGTTGGTCAGAA--------------------GAAAT----TATGCT-----AGTTCTACAGACTTCTTCGATACTT-TATCAAAAACACTATATTTTGCCACAGTTGTTATCAATAATCAATGA--- i papAnu2.chr10 C 0 I 1201 s chlSab2.chr19 18513686 186 + 33263144 TCACTGTGGAACGGCCTACCTTTGTTGCAGCCTGTGAGTCCTAATCACTGAA-ACTGGAGGCACCGAAGCCAACACAATAA-------TGTTGCAGTGAG-----GTGGTTGGTCAGAA--------------------GAAAT----TATGCT-----AGTTCTACAGACTTCTTCGATACTT-TATCAAAAACACTATATTTTGCCACAGTTGTTATCAATAATCAA------ i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198218580 190 + 210400635 TCGCTGTGGAATGGCTTTTCTTTGTTGCAGCCTGTGAACCCTAATCACTGAA-ACTGGAGGCACGCAAGCCAACATAATAA-------TACTGCAGTCAG-----GATGTTGGTCAGAA--------------------GAAAT----TATGCT-----ACTTCTACAGACTTCTTTGATACCTCTCTCAAAAACACTGTATTTTGCCACAGTTGTTATCAATAATCAA---TAA i calJac3.chr1 C 0 I 7 s mm10.chr15 77084972 161 + 104043685 TCACTATGGAGTGGCCTGCCCTTGC----AACTATGAATACCAATCAGTAAGTAGTAAAGGCATCTAAGCCAAATCCAAGA-------AGGCAAAGTGAG-----AACATCAGTTCTAT--------------------GGATTATTCTAGACT-----TGCTCTATATACTTCTTCCATACTT--------------------CCCTACAACTACTACTAG------------- i mm10.chr15 I 352 C 0 s canFam3.chr10 40843336 194 - 69331447 TCTCTGTGTGATGGTCTGTCTCTGC-------------------------AG-CCAAGAGGCATCCAGGCCAACACAGAAATACTGCCTACTGCAGTGAGGATTTGAGTTTGATTAGAAGgaggtaggggtagaggtggggagt----tattctagatgagctctatagacctttccaacacttcta-agaAAATACTATATTTCGCCACAAATGTTGTGGATAA---------- i canFam3.chr10 C 0 C 0 a score=28783.000000 s hg38.chr22_KI270876v1_alt 66423 14 + 263666 TAAAATATCCT-ATA s panTro4.chr22 34444075 14 + 49737984 TAAAATATCCT-ATA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30860230 14 + 46535552 TAAAATATGCC-ATA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100412671 14 - 115148730 TAAAATACCCT-ATA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80560452 14 + 95678458 TGAAATATCCT-ATA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80987286 14 - 96509753 TGAAATATCCT-ATA i macFas5.chr10 C 0 C 0 s chlSab2.chr19 18513872 14 + 33263144 TGAAATATCCT-ATA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198218777 15 + 210400635 TAAAATATGCTCACA i calJac3.chr1 I 7 C 0 s mm10.chr15 77085133 12 + 104043685 --AAACTGCCT-CTG i mm10.chr15 C 0 C 0 s canFam3.chr10 40843530 14 - 69331447 -AAAATATCTTTGTA i canFam3.chr10 C 0 C 0 e papAnu2.chr10 76243211 1201 + 90941950 I a score=7829018.000000 s hg38.chr22_KI270876v1_alt 66437 2175 + 263666 AAGCATTCAC----TTAGGAATTTCTAGTACTATCTACCAGAAGGCTTAGGAAG--AGCAGAGACATCCTTTAG-ATTTGCATTTGAAAC-T------TAAGTTTTTGAAAAGCTTACTGTGAATACT--ACA-GCCTTATGCTCCATGCTCCTTTGCCAACACCTATCAATGAAACTA----TGCCACAGGTATGCACTCAACATTTGAACCAATAGAAAACATTCACCAGTTCCCCTATTTCTCTCGCAAATCATGCCACTACTCGGGGCA--TATTATCAATGATCATTCCTTTCTGCTGCCCTTAACTAGGCC--------------------------ATGTGGCTCACATTATAATAACACACAAATAAAGAGGGTGACATGAAACTTCCAGGTAGATCTATGTGGCTTTAATACCTTGATGGTGGATGAAAGGCTGAATTTACTACCTCCCTAGATCTTCTGTAGTCTACGGGTAAAAG----AAGGAATGAAATGGTTTTATAAAGCAATGGTATATTATATACTTACCACAGCGCCAACTCCATAGCTAGCGGCAGGGGCAAGGGCATGGTAGGGGTCGGCTGTGTACACCCTGCCATAACTGGAAAGAAGAAACAC---AATCAGACAGATAAAGAAAAGTGTATGATCTAAAAAAATTAAAGGGATTACTGTGCTTTAAGACTTGTGAGTCAC-TTGGTCTTGGATTATCATAAGGAAACTGGAATTACAAGGAATAGGAAAAAACCTTTCTATTTCTACTCCCAAATGCAAT--AA--CTGAAAAAAATCTGAAGTACTTCCATAAAATGGAAAAGAAAGGAGTTG-GAGATGAGGAAG-AGAGGGACTGGAGTCAAAGTCAAAGAAGA----GATGAGAACAAGAAAGAGGGAGTGGAGGACAGAGTCGGTGCCTTGTGCTTTAGGCATGACAGAGGCCATCAAGA--GGTCTGCAGAAAGC-CCAGGCTGGCAAGATGCCCGATGTGCTAAGAGCTGCTGTGGAAATGGTGAAGGGAGGAAAATGGGTGACATTTTGGGATGGAACAGCTCTCATGCATCCCAAAGCTCAC---CACTGTCT---CTGTACATACCCGTCACTGTAAGCGGCTGCAGCGGCTGCAGCAGCGGTGGCTGCGGTTGCAGTAGCAGGCTGTGCATATCTGTAGGCTGCATATCCACCCTACAGGAGAGAAGAGAACTGACTTTACAGATACCTCT-CCCCCCAGGTGTacagaaaaacacacacccgcccacacacagacgtacacacatgtagacacagggactgacacaaacatagacacacacaTGGGAAGAAAATGTTTCAAACTGCATCAGTCTGCATGTTATTATTCCTCCAATAAAAAATTAAGCCCTACGATATGCAAGGATTTGCTTTCCAATTTGTGATAGTATTAAAAGTAAAGTTT---GGTAGTACCTGTT---AAATACAAGGAATGAAGATATGATTTTGAATCTGTCTTACTTCACAGT-CTTTGTTGGAACTTTCAAAAGCGAAAATATTTACAGCAAGTTGGGAGCACT--------CTGACAAGAAATAT-----AAATTATAAAGTTAAAATATATGAAATCTGTATGTGTTGACTTCAGATTCTCTAACGTGTTCTTGGATTGATTCATTAATAAGAGACT----ACAGCATGTAACAGAAA---CCTCT-------------GCTCCATCCGGCCTAGCATGTTTGCCAAGAAGCTAAGATAATCAGGTAATATTTAGAAGGAAAA-ACAATGTAGATcaggggtcagcaaactctggcctgtgagccaatgcagcttgccacctgtttttgaaagtacttgtgacagagaccaatgtcctacaaagccaaaaatatttaccacttggccct-------ttacgg--aaagtttgccaactcAGATCTACATTTCATACTTGAGCAAATCA-A-TTACAAATTTCTGAGGATTCTTTGGCTGGATTCAAATAGATCAGGAA-CCCTGCTTCTA--------GCACTT-AACTGCATTT----TCCTTCCCTAAAAGGTTTTGAGATTCTTACATATTAATCTTACAGTAGACTCT-GAG---CTTTTCTTCCAATAGTCCAAATATCCTCTC----AGTCCTAAAGAATTTC---------AAACCATCACATCCTTCTATTTCAACTCAGTTTAGATAACTCAAATATACA--------------------AAAGGTTTTCACTAT-----------------------CAGGGTGAATCA-----------TGCACTCT-------------------------TTCAGAAAGCATTTCAAGAGACAATCA-----------CAACAACAAATGCTTGCCACATGAGACAGGATATTTTT s panTro4.chr22 34444089 2169 + 49737984 AAGCATTCAC----TTAGGAATTTCTAGTACTATCTACCAGAAGGCTTAGGAAG--AGCAGAGACATCCTTTAG-ATTTGCATTTGAAAC-T------TAAGTTTTTGAAAAGCTTACTGTGAATACT--ACA-GCCTTATGCTCCATGCTCCTTTGCCAATACCTATCAATGAAACTA----TGCCACAGGTATGCACTCAACATTTGAACCAATAGAAAACATTCACCAGTTCCCCTATTTCTCTCGCAAATCATGCCACTAGTCGGGGCA--TATTATCAATGATCATTCCTTTCTGCTGCCCTTAACTAGGCC--------------------------ATGTGGCTCACATTATAATAACACACAAATAAAGAGGGTGACATGAAACTTCCAGGTAGATCTATGTGGCTTTAATACCTTGATGGTGGATGAAAGGCTGAATTTACTACCTCCCTAGATCTTCTGTAGTCTATGGGTAAAAG----AAGGAATGAAATGGTTTTATAAAGCAATGGTATATTATACACTTACCACAGCGCCAACTCCATAGCTAGCGGCAGGGGCAAGGGCGTGGTAGGGGTCGGCTGTGTACACCCTGCCATAACTGGAAAGAAGAAACAC---AATCAGACAGATAAAGAAAAGTGTATGATCTAAAAAAATTAAAGGGATTACTGTGCTTTAAGACTTGTGAGTCAC-TTGGTCTTGGATTATCATAAGGAAACTGGAATTACAAGGAATAGGAAAAAACCTTTCTATTTCTACTCCCAAATGCAAT--AA--CTG-AAAAAATCTGAAGTACTTCCATAAAATGGAAAAGAAAGGAGTTG-GAGATGAGGAAG-AGAGGGACTGGAGTCAAAGTCAAAGAAGA----GATGAGAACAAGAAAGAGGGAGTGGAGGACAGAGTCGGTGCCTTGTGCTTTAGGCATGACAGAGGCCATCAAGA--GGTCTGCAGAAAGC-CCAGGCTGGCAAGATGCCCGATGTGCTAAGAGCTGCTGTGGAAACGGTGAAGGGAGGAAAATGGGTGACATTTTGGGATGGAACAGCTCTCAAGCATCCCAAAGCTCAC---CACTGTCT---CTGTACATACCCGTCGCTGTAagcggctgcagcggctgcagcagcggtggctgcggttgcagtagcagGCTGTGCATATCTGTAGGCTGCATATCCACCCTACAGGAGAGAAGAGAACTGACTTTACAGATACCTCT-CCCCCCAGGTGTACAGAAAAacacacacccgcccacacacagacgtacacacatgtagacacagggactgacacaaacatagacacacacaTGGGAAGAAAATGTTTCAAACTGCATCAGTCTGCATGTTATTATTCCTCCAATAAAAAATTAAGCCCTACGATATGCAAGGATTTGCTTTCCAATTTGTGATAGTATTAAAAGTAAAGTTT---GGTAGTACCTGTT---AAATACAAGAAATGAAGATATGATTTTGAA----TCTTACTTCACAGT-CTTTGTTGGAACTTTCAAAAGCGAAAATATTTACAGCAAGTTGGGAGCACT--------CTGACAAGAAATAT-----AAATTATAAAGTTAAAACATATGAAATCTGTATGTGTTGACTTCAGATTCTCTAACGTGTTCTTGGATTGATTCATTAATAAGAGACT----ACAGCATGTAACAGAAA---CCTCT-------------GCTCCATCCGGCCTAGCATGTTTGCCAAGAAGCTAAGATAATCAGGTAATATTTAGAAGGAAAA-ACAATGTAGATcaggggtcagcaaactctggcctgtgagccaatgcagcttgccacctgtttttgaaagtacttgtgacagagaccaatgtcctacaaagccaaaaatatttaccacttggccct-------ttacgg--aaagtttgccaactcAGATCTACATTTCATACTTGAGCAAATCA-A-TTACAAATTTCTGAGGATTCTTTGGCTGGATTCAAATAGATCAGGAA-CCCTGCTTCTA--------GCACTT-AACTGCATTT----TCCTTCCCT-AAAGGTTTTGAGATTCTTACATATTAATCTTACAGTAGACTCT-GAG---CTTTTCTTCCAATGGTCCAAATATCCTCTC----AGTCCTAAAGAATTTC---------AAACCATCACATCCTTCTATTTCACCTCAGTTTAGATAACCCAAATATACA--------------------AAAGGTTTTCACTAT-----------------------CAGGGTGAATCA-----------TGCACTCT-------------------------TTCAGAAAGCATTTCAAGAGACAATCA-----------CAACAACAAATGCTTGCCACATGAGACAGGATATTTTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30860244 2195 + 46535552 AAGCATTCAC----TTAGCAATTTCTAGTACTATCTACCAGAAGGCTTAGGAAG--AGCAGAGACATCCTTTAG-ATTTGCATTTGAAACTT------TAAGTTTTTGAAAAGCTTACTGTGAATACT--ACA-GCCTTATGCTCCATGCTCCTTTGCCAACACCTATCAATGAAACTA----TGCCACAGGTATGCACTCAACATTTGAACCAATAGAAAACATTCACCAGTTCCCCTATTTCTCTCACAAATGATGCCACTACTCGGGGCA--CACTATCAGTGATCATTCCTTTCTGCTGCCCTTAACTAGGCCATTATTATAATAACTAGGTTATTAAAATGCGGCTCACATTATAATAACACATAAATAAAGAGGGTGACATGAAACTTCCAGGTAGATCTGTGTGACTTTAATACCTCGATGGTGCATGAAAGGCTGAATTTACTACCTCCCTAGATCTTCTGTAGTCTATGGGTGAAAG----AAGGAATGAAATGGTTTTATAAAGCAATGGTATATTATATACTTACCACAGCGCCAACTCCATAGCTAGCGGCAGGGGCAAGGGCGTGGTAGGGGTCAGCTGTGTACACCCTGCCATAACTGGAAAGAAGAAACAC---AATCAGACAGATAAAGAAAAGTGTATGATCTAAAAAAATTAAAGGGATTACTGTGCTTTAAGACTTGTGAGTCAC-TTGGTCTTGGATTATCATAAGGAAACTGGAATTACAAGGAATAGGAAAAAACCTTTCTATTTCTACTCCCAAATGCAAT--AA--CTG-AAAAAATCTGAAGTACTTCCATAAAATGGA----AAAGGAATTG-GAGATGAGGAAG-AGAGGGACTGGAGTCAAAGTCAAAGAAGA----GATGAGAACAAGAAAGAGGGAGCGGAGGACAGAGCCGGTGCCTTGTGCTTTAGGCATGACAGAGGCCATCAAGA--GGTCTGCAGAAAGC-CCAGGCTGGCAAGATGCCCGATGTGCTAAGAGCTGCTGTGGAAACGGTGAAGGGAGGAAAATGGGTGACATTTTGGGATGGAACAGCTCTCATGCATCCCAAAGCTCAC---CACTGTCT---CTGTACATACCCGTCGCTGTAagcggctgcagcggctgcagcagcagtggctgcggttgcagtagcagGCTGTGCATATCTGTAGGCTGCATATCCACCCTATAGGAGAGAAGAGAACTGACTTTACAGATACCTCT-CCCCCCAGGTGTACAGAAAAacacacacccgcccacacacagacgtacacacatgtagacacagggactgacacaaacatagacacacacaTGGGAAAAAAATGTTTCAAACTGCATCAGTCTGCATGTTATTATTCCTCCAATAAAAAATTAAGCCCTACGATATGCAAGGATTTGCTTTCCAATTAGTGATGGTATTAAAAGTAAAGTTT---GGTAGTACCTGTT---AAATACAAGAAATGAAGACATGATTTTGAATCTGTCTTACTTCACAGT-CTTTGTTGGAACTTTCAAAAGCGAAAATATTTACAGCAAGTTGGGAGAACT--------CTGACAAGAAATAT-----AAATTATAAAGTTAAAAC--ATGAAATCTGTATGTGTTGACTTCAGATTCTCTAACGTGTTCTTGGATTGATTCATTAATAAGAGACT----ACTATATGTAACAGAAA---CCTCT-------------GCTCCATCCGGCCTAGCATGTTTGCCAAGAAGCTAAGATAATCAGGTAATATTTAGAAGGAAAA-ACAATGTAGATcaggggtcagcaaactttggcctgtgagccaatgcagcttgccacctgtttttgaaagtacttgtgacagagaccaatgtcctacaaagccaaaaatatttaccacttggccct-------ttaagg--aaagtctgccaaGTCAGATCTACATTTCATACTTGAGCAAATCA-A-TTACAAATTTCTGAGGATTCTTTGGCTGGATTCAAATAGATCAGGAA-CCCTGCTTCTA--------GCACTT-AACTGCATTT----TCCTTCCCTAAAAGGTTTTGAGATTCTTACATATTAATCTTACAGTAGACTCT-GAG---CTTTTCTTCCAATGGTCCAAATATCCACTC----AGTCCTAAAGAATTTC---------AAACCATCACATCCTTCTATTTCACCTCAGTTTAGATAACCCAAATATACA--------------------AAAGGTTTTCACTAT-----------------------CAGGGTGAATCA-----------TGTACTCT-------------------------TTCAGAAAGCATTTCAAGAGACAATCA-----------CAACAACAAATGCTTGCTACATGAGACAGGATATTTTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100412685 2131 - 115148730 AAGCATTCAC----TTAGGAATTTCTACTACTATCTACCAGAAGGCTTAGGAAG--AGCAGAGACATCCTTTAG-ATTTGCATTTGAAAC-T------TAAGTTTTTGAAAAGCTTACTGTGAATACT--AGC-GCCTTATGCTCCATGCTCCTTTGCCAACGCCTATCAATGAAACTA----TGCCACAGGTATGCACTCAACATTTGAACCAATAGGAAACATTCACCAGTTCCCCTATTTCTCTCACAGATGATGCCACTACTTGGGGCA--CACTATCAATGATCATTCCTTTCTGCTGCCCTTAACTAGGCC--------------------------ATGTGACTCACATTATAATAACACACGAATAAAGAGGGTGACATGAAACTTCCAGATAGATCTGTGTGGCTTTAATACCTTGATGGTGGAAGAAAGGCTGAATTTACTACCTCCCTAGATCTTCTGTAGTCTATGGGTAAAAG----AAGGAATGAAATGGTTTTATAAAGCAACGGTATATTATATACTTACCACAGCGCCAACTCCATAGCTAGCGGCAGGGGCAAGGGCGTGGTAGGGGTCGGCTGTGTACACCCTGCCATAACTGGAAAGAAGAAACAC---AATCAGACAGATAAAGAAAAGTGTATGATCTAAAAAAATTAAAGGGATTACTGTGCTTTAAGACTTGTGAGTCAC-TTGGTCTTGGATTATCATAAGGAAACTGGAATTATAAGGAATGGGAAAAAACCTTTCTAATTCTACTCC----------------CTG-AAGAAATTTGAAGTACTTCCATAAAATGGAAAAGAAAGGAGTTG-GAGACGAGGAAG-AGAGGGACTGGAGTCAAAGCCAAAGAAGA----GATGATAACAAGAAAGAGGGAGCGGAGGACAGAGTC-----------------GCATGACAGAGGCCATCAAGA--GGTCTGCAGAAAGC-CCAGGCTGGCAAGATGCCCGATGTGCTAAGAGCTGCTGTGGAAACGGTGAAGGGAGGAAAATGGGTGATATTCTGGGATGGAACAGCTCTCATGCATCCCAAAGCTCAC---CACTGTCT---CTGTACATACCCGTCGCTGTAAGCGGCTGCAGCGGCTGCAGCAGCGGTGGCTGCGGTTGCAGTAGCAGGCTGTGCATATCTGTAGGCTGCATATCCACCCTACAGGAGAGAAGAGAACTGACTTTACAGATACCTCT-CCCCCCAGGTGTacagaaaaacacacacc--------------catacatacatgtagacacagggactgacacaaacacagacacacacaTGGGAAGAAAATGTTTCAAACTGCATCAGTCTGCATGTTATTATTCCTCCAATAAAAAATTAGGCCCTACAATATGCAAGGATTTGCTTTCCAATTTGTGATAGTATTAAAAGTAAAGTTT---GGTAGTACCTGTT---AAATACAAGAAATGAAGATATAATTTTGGATCTGTCTTACTTCACAGT-CTTTGTTGGAACTTTCAAAAGCGAAAATATTTACAGCAAGTTGGGAGAACT--------CTGACAAGAAATAT-----AAATTATAAAGTTAAAACATATGAAATCTGTATGTGTTGACTTCAGATTCTCTAACGTGTTCTTGGATGGATTCATTAATAAGAGACT----ACAGCATGCAACAGAAA---CCTCT-------------GCTCCATCTGGCCTAGCATGTTTGCCAAGAAGCTAAGATAATCAGGTAATATTTAGAAGGAAAA-ACAATGTAGATcaggggtcagcaaactttggcctgtgagccaatgcagcttgccacctgtttttgaaagtacttgtgacagagaccaatgtcctacaaagccaaaaatatttaccacttggccct-------ttaggg--aaagtctgccaattcAGATCTACATTTCATACTTGAGCCAATCA-A-TTACAAATTTCTGAGGATTCTTTGGCTGGATTCAAATAGATCAGGAA-CCCTGCTTCTA--------GCATTT-AACTGCATTT----TCCTACCCTAAAAGGTTTTGAGATTCTTACATATTAATCTTACAGTAGACTCT-GAG---CTTTTCTTCCAATAGTCCAAATATCCTCTC----AGTCCTAAAGAATTTC---------AAACCATCACATCCTTCTATTTCACCTCAGTTTCGATAACCCAAATATACA--------------------AAAGGTTTTCACTAT-----------------------CAGGGTGAATCA-----------TGTACTCT-------------------------TTCAGAAAGCATTTCAAGAGACAATCA-----------CAACAACAAATGCTTGCCACATGAGACAGGATATTTTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80560466 2143 + 95678458 AAGCGTTCAC----TTGGGAATTTCTAGTACTATCTACCAGAAGGCTCAGGAAG--AGCAGAGACATCCTTTAG-ATTTGTATTTGAAAC-T------TAGGTTTTTGAAAAGCTTACTGTGAATACT--ACA-GCCTTATGCTCCATGCTCCTTTCCCAACACCGAT-AATGAAACGA----TGCCACAGGTATGCACTCAATATTTGAACCAATAGAAAACACTCGCCAGTTCCCCTATTACTCTCACAAATGATGCCACTGCTCGGGGCA--CACTATCAGTGGTCATTCCTTTCTGCTGCCCTTAACTAGGCC--------------------------ATGTGGCTCACATTACAATAACATACAAATAAAGAGGGTGCCATGAA---------TAGATCTGTGTGGCTTTAATACCTTGATGGAGGATGAAAGGCTAAGTTTACTACCTCCCTAGATCTTCTGTAGTCTATGGGTAAAAG----AAGGGGTAAAATGGTTTTATAAAACAATGGTATATTATATACTTACCACAGCGCCAACTCCATAGCTAGCGGCAGGGGCAAGGGCATGGTAGGGGTCGGCTGTGTACACCCTGCCATAACTGGAAAGAAGAAACAC---AATCAGACAGATAAAGAAAAGTGTGTGATCTAAAAAAATTAAAGGGATTACTGTGC-TAAAGACTTGTGAGTCAC-TTGGTCTTGGATTATCATAAGGAAACTGGAATTACAAGGAATAGGAAAAAACCTTTCTATTTCTACTCCCAAATGCAATAAAA--CTG-AAAAAATCTGAAGTACTTCTATAAAATGGAAAAGAAAGGAATTG-GAGATGAGGAAG-AGAGGGACTGGAGTCAAAGCCAAAGAAGA----GATGAGAACAAGAAAGAGGGAGCGGAGGACAGAGTTGGTGCCTTGTGCTTTAGGCATGACAAAGGCCATCGAGA--GGTCTGCAGAAAGC-CCAGGCTGGCAAGATGCCCGATGTGCTAAGAGCTGCTGTGGAAACGGTGAAGGGAGGGAAATGGGTGACATTTTGGGATGGAACAGCTCTCATGCATCCCAAAGCTCAT---CTCTGCCT---CTGTACATACCCGTCGCTGTAagcggctgcagcggctgcagcagcggtggctgcggttgcagtagcagGCTGTGCATATCTGTAGGCTGCATATCCACCCTACAGGAGAGAAGAGAACTGACTTTACAGATACCTCT-CCCCCCAGGTGTACAGAAAAacacacacccgcccacacacagacgtacatacatgtagacacaaggactgacacaaacatag--acacacaTGGGAAAAAAATGTTTCAAACTGCATCAGTCTGCATGTTATTATTCCTCCAATAAAAAATTAAGCCCTACGATATGCAAGGATTTGCTTTCCAATTTGTGACAGTATTAAAAGTAAACTTT---GGTAGTACCTGTT---AAATACAAGCAATGAAGATACGATTTTGGATCTGTCTTACTTCACAGT-CTTTGTTGGAACTTTCAAAAGCAAAAATATTTACAGCAAGTTGGGAGAACT--------CTGACAAGAAATAT-----AAATTATGAAGTTAAAACATATGAAATCTGTATGTGTTGACTTCAGATTCTCTAATGTGTTCTTGGATTGATTCATTACTAAGAGACC----ACAGCATGTAACAGAAA---CCTCT-------------GCCCCATCCGGCCTAGCATGTTTGCCAAGAAGCTAAGATAATCAGGCAATATTTAGAAGGAAAA-ACAGTGTAGATcaggggtcagcaaactttggcctgtgagccaatgcagcttgccacctgtttttgaaaatacttgtgacagagaccaatgtcctacaaagccaaaaatattgaccacttggctct-------ttatgg--gaagtctgccaactcAGATGTACATTTCATACTTGAGCAAATCA-G-TTACAGATTTCTGAGGATTCTTTGGCTGGATCCAAATAGATCAGGAA-CCCTGCTTCTA--------GCATTT-AACTGCATTT----TCCTTCCCTAAAAGGTTTTGAGATTCTTACATATTAATCTTACAGTAGACTCT-GAG---CTTTTCTTCCAATGGTCCAAATATCCTCTC----AGTCCTAAAGAATTTC---------AAACCATCATATCCTTCTATTTCACCTCAGTTTAGGTAACTCAAATACACA--------------------AAAGA---------------------------------------GAACCA-----------TGTATTCT-------------------------TTCAGAAAGCATTTCAAGAGACAATCA-----------CAACAACAAA----TGCCACATGAGACAGGATAATTTA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80987300 2141 - 96509753 AAGCGTTCAC----TTGGGAATTTCTAGTACTATCTACCAGAAGGCTCAGGAAG--AGCAGAGACATCCTTTAG-ATTTGTATTTGAAAC-T------TAGGTTTTTGAAAAGCTTACTGTGAATACT--ACA-GCCTTATGCTCCATGCTCCTTTCCCAACACCGAT-AATGAAACGA----TGCCACAGGTATGCACTCAATATTTGAACCAATAGAAAACACTCGCCAGTTCCCCTATTACTCTCACAAATGATGCCACTGCTCGGGGCA--CACTATCAGTGGTCATTCCTTTCTGCTGCCCTTAACTAGGCC--------------------------ATGTGGCTCACATTACAATAACATACAAATAAAGAGGGTGCCATGAA---------TAGATCTGTGTGGCTTTAATACCTTGATGGAGGATGAAAGGCTAAGTTTACTACCTCCCTAGATCTTCTGTAGTCTATGGGTAAAAG----AAGGGGTAAAATGGTTTTATAAAACAATGGTATATTATATACTTACCACAGCGCCAACTCCATAGCTAGCGGCAGGGGCAAGGGCATGGTAGGGGTCGGCTGTGTACACCCTGCCATAACTGGAAAGAAGAAACAC---AATCAGACAGATAAAGAAAAGTGTGTGATCTAAAAAAATTAAAGGGATTACTGTGC-TAAAGACTTGTGAGTCAC-TTGGTCTTGGATTATCATAAGGAAACTGGAATTACAAGGAATAGGAAAAAACCTTTCTATTTCTACTCCCAAATGCAAT--AA--CTG-AAAAAATCTGAAGTACTTCTATAAAATGGAAAAGAAAGGAATTG-GAGATGAGGAAG-AGAGGGACTGGAGTCAAAGCCAAAGAAGA----GATGAGAACAAGAAAGAGGGAGCGGAGGACAGAGTTGGTGCCTTGTGCTTTAGGCATGACAAAGGCCATCGAGA--GGTCTGCAGAAAGC-CCAGGCTGGCAAGATGCCCGATGTGCTAAGAGCTGCTGTGGAAACGGTGAAGGGAGGGAAATGGGTGACATTTTGGGATGGAACAGCTCTCATGCATCCCAAAGCTCAT---CTCTGCCT---CTGTACATACCCGTCGCTGTAAGCGGCTGCAGCGGCTGCAGCAGCGGTGGCTGCGGTTGCAGTAGCAGGCTGTGCATATCTGTAGGCTGCATATCCACCCTACAGGAGAGAAGAGAACTGACTTTACAGATACCTCT-CCCCCCAGGTGTACAGAAAAACACACACCCGCCCACACACAGACGTACATACATGTAGACACAAGGACTGACACAAACATAG--ACACACATGGGAAAAAAATGTTTCAAACTGCATCAGTCTGCATGTTATTATTCCTCCAATAAAAAATTAAGCCCTACGATATGCAAGGATTTGCTTTCCAATTTGTGACAGTATTAAAAGTAAACTTT---GGTAGTACCTGTT---AAATACAAGCAATGAAGATACGATTTTGGATCTGTCTTACTTCACAGT-CTTTGTTGGAACTTTCAAAAGCAAAAATATTTACAGCAAGTTGGGAGAACT--------CTGACAAGAAATAT-----AAATTATGAAGTTAAAACATATGAAATCTGTATGTGTTGACTTCAGATTCTCTAATGTGTTCTTGGATTGATTCATTACTAAGAGACC----ACAGCATGTAACAGAAA---CCTCT-------------GCCCCATCCGGCCTAGCATGTTTGCCAAGAAGCTAAGATAATCAGGCAATATTTAGAAGGAAAA-ACAGTGTAGATcaggggtcagcaaactttggcctgtgagccaatgcagcttgccacctgtttttgaaaatacttgtgacagagaccaatgtcctacaaagccaaaaatattgaccacttggctct-------ttatgg--gaagtctgccaactcAGATGTACATTTCATACTTGAGCAAATCA-G-TTACAGATTTCTGAGGATTCTTTGGCTGGATCCAAATAGATCAGGAA-CCCTGCTTCTA--------GCATTT-AACTGCATTT----TCCTTCCCTAAAAGGTTTTGAGATTCTTACATATTAATCTTACAGTAGACTCT-GAG---CTTTTCTTCCAATGGTCCAAATATCCTCTC----AGTCCTAAAGAATTTC---------AAACCATCATATCCTTCTATTTCACCTCAGTTTAGGTAACTCAAATACACA--------------------AAAGA---------------------------------------GAACCA-----------TGTATTCT-------------------------TTCAGAAAGCATTTCAAGAGACAATCA-----------CAACAACAAA----TGCCACATGAGACAGGATAATTTA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76244412 2143 + 90941950 AAGCGTTCAC----TTGGGAATTTCTAGTACTATCTACCAGAAGGCTCAGGAAG--AGCAGAGACATCCTTTAG-ATTTGTATTTGAAAC-T------TAGGTTTTTGAAAAGCTTACTGTGAATACT--ACA-GCCTTATGCTCCATGCTCCTTTCCCAACACCGAT-AATGAAACGA----TGCCACAGGTATGCACTCAACATTTGAACCAATAGAAAACACTCGCCAGTTCCCCTATTACTCTCACAAATGATGCCACTGCTCGGGGCA--CACTATCAGTGGTCATTCCTTTCTGCTGCCCTTAACTAGGCC--------------------------ATGTGGCTCACACTACAATAACATACAAATAAAGAGGGTGCCATGAA---------TAGATCTGTGTGGCTTTAATACCTTGATGGTGGATGAAAGGCTAAGTTTACTACCTCCCTAGATCTTCTGTAGTCTATGGGTAAAAG----AAGGGGTGAAATGGTTTTATAAAACAATGGTATATTATATACTTACCACAGCGCCAACTCCATAGCTAGCGGCAGGGGCAAGGGCATGGTAGGGGTCGGCTGTGTACACCCTGCCATAACTGGAAAGAAGAAACAC---AATCAGACAGATAAAGAAAAGTGTGtgatctaaaaaaattaaagggaTTACTGTGC-TAAAGACTTGTGAGTCAC-TTGGTCTTGGATTATCATAAGGAAACTAGAATTACAAGGAATAGGAAAAAACCTTTCTATTTCTACTCCCAAATGCAAT--AA--CTG-AAAAAATCTGAAGTacttctataaaatggaaaagaaaggaattg-GAGATGAGGAAG-AGAGGGACTGGAGTCAAAGCCGAAGAAGA----GATGAGAACAAGAAAGAGGGAGCGGAGGACAGAGTTGGTGCCTTGTGCTTTAGGCATGACAAAGGCCATCGAGA--GGTCTGCAGAAAGC-CCAGGCTGGCAAGATGCCCGATGTGCTAAGAGCTGCTGTGGAAACGGTGAAGGGAGGGAAATGGGTGACATTTTGGGATGGAACAGCTCTCATGCATCCCAAAGCTCAT---CTCTGCCT---CTGTACATACCCGTCGCTGTAAGCGGCTGCAGCGGCTGCAGCAGCGGTGGCTGCGGTTGCAGTAGCAGGCTGTGCATATCTGTAGGCTGCATATCCACCCTACAGGAGAGAAGAGAACTGACTTTACAGATACCTCT-CCCCCCAGGTGTacagaaaaacacacacccgcccacacacagacgtacatacatgtagacacagggactgacacaaacatagacacacacatgggaaaaaaatgtttcaaactgCATCAGTCTGCATGTTATTATTCCTCCAATAAAAAATTAAGCCCTATGATATGCAAGGATTTGCTTTCCAATTTGTGACAGTATTAAAAGTAAACTTT---GGTAGTACCTGTT---AAATACAAGCAATGAAGATATGATTTTGGATCTGTCTTACTTCACAGT-CTTTGTTGGAactttcaaaagcaaaaatatttacagCAAGTTGGGAGAACT--------CTgacaagaaatat-----aaattatgaagTTAAAACATATGAAAACTGTATGTGTTGACTTCAGATTCTCTAATGTGTTCTTGGATTGATTCATTACTAAGAGACC----ACAGCATGTAACAGAAA---CCTCT-------------GCCCCATCCAGCCTAGCATGTTTGCCAAGAAGCTAAGATAATCAGGCAATATTTAGAAGGAAAA-ACAGTGtagatcaggggtcagcaaactttggCCTGTGAGCCAATGCAGCTTGCCACCTGTTTTTGAAGATACTTGTGACAGAGACCAATGTCctacaaagccaaaaatattgaCCACTTGGCTCT-------TTATGG--GAAGTCTGCCAACTCAGATGTACATTTCATACTTGAGCAAATCA-G-TTACAGATTTCTGAGGATTCTTTGGCTGGCTCCAAATAGATCAGGAA-CCCTGCTTCTA--------GCATTT-AACTGCATTT----TCCTTCCCTAAAAGGTTTTGAGATTCTTACATATTAATTTTACAGTAGACTCT-GAG---CTTTTCTTCCAATGGTCCAAATATCCTTTC----AGTCCTAAAGAATTTC---------AAACCATCATATCCTTCTATTTCGCCTCAGTTTAGGCAACTCAAATACACA--------------------AAAGA---------------------------------------GAAGCA-----------TGTATTCT-------------------------TTCAGAAAGCATTTCAAGAGACAATCA-----------CAACAACAAA----TGCCACATGAGAcaggataattta i papAnu2.chr10 I 1201 C 0 s chlSab2.chr19 18513886 2138 + 33263144 AAGCATTCAC----TTGGGCATTTCTAGTACTATCTACCAGAAGGCTCAGGAAG--AGCAGAGACATCCTTTAG-ATTTGTATTTGAAAC-T------TAGGTTTTTGAAAAGTTTACTGTGAATACT--ACA-GCCTTATGTTCCATGCTCCTTTCCCAACACCAAT-AATGAACCGA----TGCCACAGGTATGCACTCAACATTTGAACCAACAGAAAACACTCGCCAGTTCCCCTATTACTCTCACAAATGATGCCACTGCTCGGGGCA--CACTATCAGTGGTCATTCCTTTCTGCTGCCCTTAACTAGGCC--------------------------ATGTGGCTCACACTACAATAACATACAAATAAAGAGGGTGCCATGAA---------TAGATCTGTGTGGCTTTAATACCTTGATGGTGGATGAAAGGCTAAGTTTACTACCTCCCTAGATCTTCTGTAGTCTATGGGTAAAAG----AAGGGGTGAAATGGTTTTATAAAACAATGGTATATTATATACTTACCACAGCGCCAACTCCATAGCTAGCGGCAGGGGCAAGGGCATGGTAGGGGTCGGCTGTGTACACCCTGCCATAACTGGAAAGAAGAAACAC---AATCAGACAGAT----AAAAGTGTGTGATCTAAAAAAATTAAAGGGATTACTGTGC-TAAAGACTTGTGAGTCAC-TTGGTCTTGGATTATCGTAAGGAAACTGGAATTACAAGGAATAGGAAAAAACCTTTCTATTTCTACTCCCAAATGCAAT--AA--CTG-AAAAAATCTGAAGTACTTCTATAAAATGGAAACGAAAGGAATTG-GAGATGAGGAAG-AGAGGGACTGGAGTCAAAGTCGAAGAAGA----GATGAGAACAAGAAAGAGGGAGCGGAGGACAGAGTTGGTGCCTTGTGCTTTAGGTATGACAAAGGCCATCAAGA--GGTCTGCAGAAAGC-CGAGGCTGGCAAGATGCCCGATGTGCTAAGAGCTGCTGTGGAAACGGTGAAGGGAGGGAAATGGGTGACATTTTGGGATGGAACAGCTCTCATGCATCCCAAAGCTCAT---CTCTGCCT---CTGTACATACCCGTCGCTGTAAGCGGCTGCAGCGGCTGCAGCAGCGGTGGCTGCGGTTGCAGTAGCAGGCTGTGCATATCTGTAGGCTGCATATCCACCCTACAGGAGAGAAGAGAACTGACTTTACAGATACCTCT-CCCCCCAGGTGTACAGAAAAACACACACCCGCCCACACACAGACGTACATACATGTAGACACAGGGACTGACACAAACATAGACACACACATGGGAAAAAAATGTTTCAAACTGCATCAGTCTGCATGTTGTTATTCCTCCAATAAAAAATTAAGCCCTACGATATGCAAGGATTTGCTTTCCAATTTGTGACAGTATTAAAAGTAAACTTT---GGTAGTACCTGTT---AAATACAAGCAATGAAGATATGATTTTGGATCTGTCTTACTTCACAGT-CTTTGTTGGAACTTTCAAAAGCAAAAATATTTACAGCAAGTTGGGAGAACT--------CTGACAAGAAATAT-----AAATTATGAAGTTAAAACATATGAAATCTGTATATGTTGACTTCAGATTCTCTAATGTGTTCTTGGATTGATTCATTACTAAGAGACC----ATAGCATGTAACAGAAA---CCTCT-------------GCCCCATCCGGCCTAGCATGTTTGCCAAGAAGCTAAGATAATCAGGCAATATTTAGAAGGAAAA-ACAATGTAGATcaggggtcagcaaactttggcctgtgagccaatgcagcttgccacctgtttttgaaaatacttgtgacagagaccaatgtcctacaaagccaaaaatattgaccacttggctct-------ttatgg--gaagtctgccaactcAGATGTACATTTCATACTTGAGCAAACCA-G-TTACAGATTTCTGAGGATTCTTTGGCTGGATCCAAATAGATCAGGAA-CCCTGCTTCTA--------GCATTT-AACTGCATTT----TCCTTCCCTAAAAGGTTTTGAGA-TCTTACATATTAATCTTACAGTAGACTCT-GAG---CTTTTCTTCCAATGGTCCAAATATCCTCTC----AGTCCTAAAGAATTTC---------AAACCATCATATCCTTCTATTTCACCTCAGTTTAGGTAACTCAAATACACA--------------------AAAGA---------------------------------------GAACCA-----------TGTATTCT-------------------------TTCAGAAAGCATTTCAAGAGACAATCA-----------CAACAACAAA----TGCCACATCAGGCAGGATAATTTA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198218792 2163 + 210400635 AAGCATTCAC----TTGGCAATTTCTAGTACTACCTACCAG-AGGTTTAGGAAT--AGCAGGGACAACTTTTAG-ATTTGTATTTTAAAC---------AAGTTTTTGAAAAGCTTACTGTGAAAACTAGAGA-GCCTTATGCTCCATGCTCCTTTGCCAACATCTATCAATGAAATTA----TGCCACAGGTATGCACCCAACATTTGAACCAACAGAAAACATTCACCAGTTCCCTTATTTCTCTAACAAATGGTGCCACTACTCGGGGCA--CACTATCCCTGATCATTCCTTTCTGCTGCCCTTAACCAGGCC--------------------------ATGTGGCTCACATTATAATAACACACAAATAAAGAGGGTGACATGAAACTTCCAGGTAGATCTGAGTGGCTTTAATACCCTGACAGTGGATGAAAGGCTGAATTTACTACCTTC------CTTTTGTAGTCTATGGGTAAAAG----AAGGAATAAAATGGTTTTCTAAAACAATGGTG---CATACACTTACCACAGCGCCAACTCCATAGCTAGCGGCAGGGGCAAGGGCATGGTAGGGGTCGGCTGTGTACACCCTGCCATAACTGGAAAGAAGAAACAC---AATCAGACAGATAAAGAAAAGTGTGTGATCTAAAAAAATTAAAGAGATTACCGTGC-TAAAGAC-TGTGAGCCACTTTGGTCTTGGATTATCACAAAGAAACTGGAATTATGAGGAACA-GAAAAAACCTTTCTACTTCTATTCCCGAATACAAT--AA--CTG-AAAAATTCTTAAGTACTTCCACAAAATGGAAAAGAAAGGAGTTC-GAGATGAGGAAG-AGAGAGACTGGAGTCAAAGCCAAATTAGA----GATGAGAACAAGAAAGAGGGAGTGAAGTATAGAGTCAGTGCCTTGTGCTTTGGGCGTGACAGATGCCATCAAGA--GGTCTGCAGAAAGC-CCAGGCTGGCAAGATGCCTAATGTGCTAAGAGCTGCTGTGGAAACAGTAAAGGGAGGAAAATGGGCGACATTTTGGGATGGAGCAGCTCTCATGCATCCCAGAGCTCAC---CTCTGTCT---CTGTACATACCCGTCGCTGTAagctgcggcagcggctgcagcagcggtggctgcggttgcagtagcagGCTGTGCATATCTGTAGGCTGCATATCCACCCTACAGGAGAAAAGAGAACTGACTTTACAGATACCTCTCCCCCCCAGGTGTACAGAAAAacacacacccgcccacacacagacgtacatacacgaagacgcagagactgacacaaacacag--acacacacGGGAAGAAAATGTTTCAAACTGCATCAGTCTGCATGTTATTATTCCTCCAATAAAAAATTAAGCCCTGTGATATGCAAGGATTTGCTTTCCAATTTGTGATAGTATTAAAAATAAACTTT---GGTAGTACCTGTA---AAACACCAGACATGAAGATATCATTTTGGATCTGTTTTACTTTACAGA-CTTTGTTGGAACTTTCCAAAGTGAAAACATTTACAGCAAATTGGGAGAACT--------CTGACAAGaaatat-----aaattataaatttaaaaCACATTAAATCTCCATGTGCTGACTTCGGATTCTCTAATGCGTTCTTGGATTGATTCATTAGTAACAGACT----ACAGCATATAACAGAAA---CCTCT-------------GCTCCATCCGGCCTAGCATGTCTGCCAAGAAGCTAAGATAATCAGGTCATATTTAGAAGGAAAA-ACAATGTAGATcaggggtcagtagactttggcctgtgagccaatgcagcttgccacctgtatttgaaagtacttgtaacagagaccaatgtcctacgaagccaaaaatatttaccacctggccct-------ttacag--aaagtctgccaactcAGATCTACACTTCATACTTGAACAAATTG-G-TTACAAATTTCTGAGGATTCTTTGGCTGGATTCAAATAGACCAGGAA-CCGTGCTTCTA--------GAATTTAAACTGCATTT----CCCTTCCCTAAAAGG-TTTGAGATTCTTACATACTAATCTTACAGCGGACTTT-GAG---CTTTTCTTCCAATGGTCCAAATATC---TC----AGTCCTAAAGAATTTCTAACCACCAAAACCATCACATCCTTCTATTTCACCTCACTTTAGACAACCCAAATACACA--------------------AAAGGTTTTCACTAT-----------------------CAAGGTGAACCA-----------TGCACTCT-------------------------TTCACAAAGTATTTC-AGAGACAATC--------------ACAACAAATGCTTGCCACATGAGACAGGATATTTTA i calJac3.chr1 C 0 C 0 s mm10.chr15 77085145 2076 + 104043685 CAGTGTTCACAACACTGG--AGTCCCAGTGCTATATACCAGAAGGC--AGGAAGGCAGCAGGCACATTGTCAGGCATCAGCAATTGCAAA-C------TGAGCACACCGAGAGCTTGCTGGGAGAGCT--GGACACCTTACCACTCCTAAGCCTTTGGTA----CTATCAAGAACACTATGCTTGCTACTGG-ATGCACCTGTTAAAGGAACCCA-----------------TTCCCTTTGTTCTCTCCTAAATGATGCCATTACTTGGGAAAATTGTCACCATCAAGCCCTCCTTCCTACTGCCTTT-------CC--------------------------A------------------GATATACAGGTAAAGCAAGTGACATAAT--TCCCAGG--GTCTCACATGGCTTCCACACTTTGGCAATGGGTGAAATTAC-AACGCATTACTTTCCCAGATCTTTCAAAATTTGCATGTA--------GAGGAGTAACATGGCTTAAGAAA--AAAGGTA---TATAAACTTACCACAGCGCCAACTCCATAGCTGGCGGCAGGGGCGAGGGCATGGTAGGGGTCAGCTGTGTACACCCTGCCGTAACTGGAAAGGAGAAGCATGGGGGTCAGACAGA-----AGCAGT-TGAGACC----GAGACTGAAGG---CCCTGTGC-TGCAGAC------------CAGGACT---ATTA--ATAGGGAAAATGGCA--------GAT-GGAAGAAGTTTTCCTATCTCTGTTCCTGAGTGCAGT--AA--CTG-GGAAATCCTG----ACTACTATAAAATGGCAAAGAAGGGGTC----AAATGGGAAAGAAGACCAACTGTATTCACAGCCAAAGAAGA----GAC-AGAACAAG--AGAGCAAGTACAGGAAGAGGCTAGGCCTGGGTGCT----GTGTGGCAGAAGCCATGAAGGACAGACTCCAGAAAGAGCCAGGCTGGCAGGA-GCCCAA-GGACTCAGGGCAATTCTGGAAATAGTGAAGGGCGAGA---------------GGAATGCTGCAGATAGCATGGTGCTCAGGGCCTGCTTGCTCTGGCT---CTGTACATACCCGTCGCTGTAAGCGGCTGCAGCGGCTGCAGCAGCTGTGGCTGCGGTTGCAGTAGCAGGCTGTGCATATCTGTAGGCTGCATATCCACCCTACAGGAGAGAAGAGAACTGACTTTACAGCTACCTCT-CCCC-----------GAGACAGACACCCCTCCCCCCAGACAGAC--ACACACGTGTAGACACAAGGACAGACACAAACACAG--ACACACAT-GGAAAGAGATGTTTCAAACTGCACCAGTTTGCATG---TTCCTCCTATGGTAGGAAATCAAGCTTTAGCCAATGTAGAAATTTGCTTTCCAATTTGTGACAGTAAGAAAAATAAAGTATACAGGTACTACCTAGT---AATTTTAAGAAATACAGATATAATTTTGGA----TCTTACTTCGCAGTGTTTTTTTGGAACTCTTGACATGGAAAATATTCATGAAATGTTAGGAGAATT--------GAGTCAACATTCATGTAACAGTTGAAAGAATTAAAATTTACTATCCCTATCAGTGTCAATGTCAGACTCTCT-----GTACTGGGATTAGCTTGTCACTAAGAA--T----GCAGCAGGTCACAGGAA---GATCTAACCCAGAGCTTAGATCCATCTGGCAGAGCATGTCTGTCAAGA---------------GCAATACTGAGAAGGAAGA-GCCAAGCAGACCAGACATCAGAGAACT---GCCTGTGAATCAATA--------AATCTGCTAGTTAGAGTGGCTAGGACAGAGATT-GTGGCCTTAAAAGCTA---------ACCGCTTAACCCTATTTCTCTCCAGG--AAAACCT--CAACTCTAGCCCACATTCCAGACTTGGGGAAATCA-GATTGCAAATGGCTTATGAGTGTTTGACTAGCTCTGATGAGGTCATA----CATGCCTC-----------------AGCTGC---T----TCCTTT-------------------------------TCCCACAGCAACCTTT-GGGAGCTTTTTTTCCCAGTGGATCATATACCTTCTTGAGAAGTCCTGAGGAACTCA---------GAGCCATCACAGCCTACTACTCCACCTGCATTTTGATGAACTAAACAAAGGCAATTGATGTGTGTATGAACAGAGATGTTCCTTCTGGAAGCACTCAAGGACAGTGAGGCAGGGTGATACAACTGGTATCATTGTATCCTTCTATAACCTACCTACTTTATCTGATTCAGAGA-TACTTAAAAACAAAACCAACCAAACAAGCAAAGAAAAAACTCCAAAAACCCAagacagggtttctct i mm10.chr15 C 0 I 120 s canFam3.chr10 40843544 2085 - 69331447 AGGTATTCAT----TTGGTGATTCCTAGTACTACCTGCCAGAGGGCTCAGGAAC--GGCAGGGATAACCTTTGGTATCCACATTTGAAAC-TAATGTCTATTTTTTTGAAAAGCTTACTGTGAAAGCTGGAGA-GGCTCATGCCCC-CACATCTTTGCTAACACCTATCAATTAAACCA----AGCCACAGGCATATATCCAACAGCTGAGCCAGTATAAAATGTCAACCTGTTTCCTTCTTTCTCTCCCAAATGATGCCCTTACTCAGGGCA--GACTGTCACTACTCATTCCTTT---TTGTCTTTAACCAGGTC--------------------------AAGTGGCTCACACT---ATAACACACAGATAAAGAGAGTGATGTGAACTTTT----TAGA-CTCTGTGGCTTCAGTACTCTGGCAATGGAAGAAGGCCTGAATTTATTACCTCTCTAGATCTTTTGGAATCTGTAGGTAAAAGCTAAAAGGAGTAAAGTGGTTAAAAATAAAAAAGGTACACATAATACTCACCACAGCGCCAACTCCATAGCTAGCGGCAGGGGCAAGGGCATGGTAGGGGTCGGCTGTGTACACCCTGCCATAACTGGAAAGAAGAAATAC---AATCAGGGAGATCAAGCAAAGGCTGTGCTCTGGAAGAATGAGCGAGTTTGCTGTGC-TAAAGACATGTGAGTAAC-CTGGTCTTGGAAAGTTATTAGGGAACT-----------------------------TTGTTTCTACTCCCAAGTGCAGT--TACTCTG-AAAAATTCTGAAGTAGTTCCATAAAATGGGAAAGAAAGGAGTCGAGGGATGAGGGAG-AGGGAGAGTGGGGTCCAAGCAAAGAAAGGAGTCGAGGGGAATAAGCAGGAGGGGGTGGAGCA-----------------GCTTCT------------------------GGACCACAGGTGTC-CCCG------------------GTGCCAGGTGGCATCCAGGCAGTGGCGGCAGGAGGGAAGTGGGCG-----------------------------CCCCCCAGCCCCT---CTTCCCGTGAGCTGCACCTACCCGTCGCTGTAggcggcagcggcagcggcggcggctgtggccgcggTTGCAGTAGCGGGCTGTGCGTATCTGTAGGCTGCGTATCCGCCCTACAGGAGAGAAGAGAACTGACTTTACAGATACCTCT-CCCCCCA--TGGCCAGacaaacacacacccacccacacacagacatacgcgcacaaggacacagggacagacacaaacacag--acacacGTGGGAGGAGAATGTTTCAAACTGCATCAGTCTACATGTTATCATTCCTCTGGCACAGAATTAAGCTCCACCCAATGCCGGGATGTGCTTTCCAATTTGGGAAAGTAACACAAGTAAACTCTCCTGGCAGGACCTGTTCTCAGATTGAAGAAATGAAGGTATGATTTCAGA--TGTCTTACTTCACAGT-CTTTGCTGGGACTTTTGATAGGACAAATATTTGCAGGGAGTTGGGAGAACTTTACCTGACTGCTGGGGAAAGT-----AAATTACAGAACTAGAACATGCTAAATGTGTATGTGTTAACATCAGAGTCTC------------AGATGGGTTCATTGCT--GAGACTATGGACTGTATACAATGGAAAGGTCCTCTATAGTGCCGTGT-GCTCCATGAGGACTAGGACATTTGCCAAGAGGCTAAGATAACTGGGCAACTGTGAGAAGGAAAACCCAGCAGAGATCAGGGGTTTGCAAACTTCAGTGTGTGGGCCCATGCAGCTTGGCCCTGCTTTTTGAAagcaggtgtga-agagac---tggcctccaatgctgaaagtattgaatgcctggccct-------tcaccgaaaaagtcgaccAGCTCTGATCTACACTTCAGACTCCTGCAAATCACA-TCACCAACAGCTGAGGCCTCTGCAGTGGGATTCACCTAGATGAGGAAGCCCTCCCTCCACACCCCGGGCATTT-AACTGCATTTACTCTCCTCTCCTGGAAGATTCGGAGATTCTTACACTCCAGTCTCACAGCAGGCTTTGGAG---CTCTTCTGTCAATGGGTTCAATATCCTCTC----AGTCCTGGAGGGTTTC---------ATATTCCCACGTCCTGTTTCTTCCCCTCAGTTTAGGGGAACCAAATACCCC--------------------AAAGTTTTTCACTGT-----------------------CAGGGTCAACCA-----------TATGTACT-------------------------CCCAG----TATTTCAA-AGATAATCA-----------CAAT--TAAG----TGCCACATGAGACAGGCCATTTTA i canFam3.chr10 C 0 C 0 a score=102550.000000 s hg38.chr22_KI270876v1_alt 68612 28 + 263666 AAAAGTGGCAAACTCTACTTTTTATTAT s panTro4.chr22 34446258 28 + 49737984 TAAAGTGGCAAACTCTACTTTTTATTAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30862439 28 + 46535552 AAAAGTGGCAAACTCTACTTTTTATTAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100414816 28 - 115148730 AAAAGTGGCAAACTCTACCTTTTATTAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80562609 28 + 95678458 AAAAGTGGCAAACTCTACTTTTTATTAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80989441 28 - 96509753 AAAAGTGGCAAACTCTACTTTTTATTAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76246555 28 + 90941950 aaaagtggcaaactctacttcttattat i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18516024 28 + 33263144 AAAAGTGGCAAACTCTACTTTTTATTAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198220955 28 + 210400635 AAAAGTGGCAAACTCTATTTTTTACTAT i calJac3.chr1 C 0 I 15 s canFam3.chr10 40845629 28 - 69331447 AAAAGTGGCAAGCCCTATGTTTTCTTCT i canFam3.chr10 C 0 C 0 e mm10.chr15 77087221 120 + 104043685 I a score=12073.000000 s hg38.chr22_KI270876v1_alt 68640 8 + 263666 TTAT-------GAAA s panTro4.chr22 34446286 8 + 49737984 TTAT-------GAAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30862467 15 + 46535552 TTTTCTTTACCCTTC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100414844 15 - 115148730 TTTTCTTTACCCTTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80562637 15 + 95678458 TTTTCTTTTCCCTTC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80989469 15 - 96509753 TTTTCTTTTCCCTTC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76246583 15 + 90941950 ttttcttttcccttc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18516052 15 + 33263144 TTTTCTTTTCCCTTC i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40845657 12 - 69331447 ---TCTTTACCCTTC i canFam3.chr10 C 0 C 0 e mm10.chr15 77087221 120 + 104043685 I e calJac3.chr1 198220983 15 + 210400635 I a score=118998.000000 s hg38.chr22_KI270876v1_alt 68648 31 + 263666 TAGAATTCATCTATTTTACCTAAACGTAATT s panTro4.chr22 34446294 31 + 49737984 TAGAATTCATCTATTTTACCTAAACGTAATT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30862482 31 + 46535552 TAGAATTCATCTATTTTACCTAAACGTAATT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100414859 31 - 115148730 TAGAATTCATCTATTTTACCTAAATGTAATT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80562652 31 + 95678458 TAGAATTCATCTATTTTACCTAAACCTAATT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80989484 31 - 96509753 TAGAATTCATCTATTTTACCTAAACCTAATT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76246598 31 + 90941950 tagaatttatctattttaccTAAACCTAATT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18516067 31 + 33263144 TAGAATTCATCTATTTTACCTAAACCTAATT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198220998 31 + 210400635 TAGAATTCATCTATTTTACCTAAACCTAATT i calJac3.chr1 I 15 C 0 s canFam3.chr10 40845669 31 - 69331447 TAGAATTCATCTATTTCACCTAAACCTAAAT i canFam3.chr10 C 0 C 0 e mm10.chr15 77087221 120 + 104043685 I a score=307332.000000 s hg38.chr22_KI270876v1_alt 68679 83 + 263666 CAGATGCAAATTTTTATTATTGGCCTTTCACTATCAAAAACAACTATGTTCAACTGGCCCAACT-GAACATCAT--TTCAGTAGTG s panTro4.chr22 34446325 83 + 49737984 CAGATGCAAATTTTTATTATTGGCCTTTCGCTATCAAAAACAACTATGTTCAACTGGCCCAACT-GAACATCAT--TTCAGTAGTG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30862513 84 + 46535552 CAGATGCAAATTTTTATTATTGGCCTTTCACTATCAAAAACAACTATGTTCAACTGGCCCAACTGGAACATCAT--TTCAGTAGTG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100414890 83 - 115148730 CAGATGCAAATTTTTATTATTGGCCTTTCACTATCAAAAACAACTCTGTTCAACTGGCCCAACT-GAACATCAT--TTCAATAGTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80562683 83 + 95678458 CAGATGCAAATTTTTATTACTGGCCTTTCACTATCAAAAACAACTATGTTCAAGTGGCCCAACT-AAATATCAT--TTCAGTAGTG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80989515 83 - 96509753 CAGATGCAAATTTTTATTACTGGCCTTTCACTATCAAAAACAACTATGTTCAACTGGCCCAACT-AAATATCAT--TTCAGTAGTG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76246629 83 + 90941950 CAGATGCAAATTTTTATTACTGGCCTTTCACTATCAAAAACAACTATGTTCAACTGGCCCAACT-AAATATCAT--TTCAGTAGTG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18516098 83 + 33263144 CAGATGCAAATTTTTATTACTGGCCTTTCACTATCAAAAACAACTATGTTCAACTGGCCCAACT-AAACATCAT--TTCAGTAGTG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198221029 82 + 210400635 CAGATGCAAATTTTTATTA-TGGCCTTTCACTATCAAAAACAACTAAGTTCAATTGACCCAACT-GGACATGAG--TTCAGCAGTG i calJac3.chr1 C 0 C 0 s mm10.chr15 77087341 83 + 104043685 CTGTTACACATTTTTATTGCCATCCTTTGGCTGTCAAAAATA--TCTGTTCAGTTGGTCCAATT-GACTCAGGTGGTTCAGTCATG i mm10.chr15 I 120 C 0 s canFam3.chr10 40845700 79 - 69331447 CAGGTGTGAATTTTTATTACTATCTT----CTATCAGACAGAACTATGTTCAGCTGGTCCACTT-AGGCGCCAT--TTCATTTGTG i canFam3.chr10 C 0 I 165 a score=555468.000000 s hg38.chr22_KI270876v1_alt 68762 178 + 263666 AACAATAGCATAAACA--TTTTATTTCTGTGGATAAAATGTGCTCATTTCTCATG--------GATATCTG-AAGGTTTCTGCCCTGTGCTTTCTACTTCCTATTTTTTCAAATGTTCGA--TTTTTCTAAATCTACAAAAGAAATTTCAAATTTAC---TTCTGTATCATTTCTTGGGATTGAGAACAACTAT s panTro4.chr22 34446408 178 + 49737984 AACAATAGCATAAACA--TTTTATTTCTGTGGATAAAATGTGCTCATTTCTCATG--------GATATCTG-AAGGTTTCTGCCCTGTGCTTTCTACTTCCTATTTTTTCAAATGTTCAA--TTTTTCTAAATCTACAAAAGAAATTTCAAATTTAC---TTCTGTATCATTTCTTGGGATTGAGAACAACTAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30862597 178 + 46535552 AACAATAGCATGAACA--TTTTATTTCTGTGGATAAAATGTGCTCATTTCTCATG--------GATATCTG-AAGGTTTTTGCCCTGTGCTTTCTACTTCCTATTTTTTCAAATGTTCAA--TTTTTCTAAATCTACAAAAGAAATTTCAAATTTAC---TTCTGTATCATTTCTTGGGATTGAGAACAACTAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100414973 178 - 115148730 AACAATAGCATTAACA--CTTTATTTCTGTGGATAAAATGTGCTCATTTCTCATG--------GATATCTG-AAGGTTTTTGCCCTGCGCTTTCTACTTTCTATTTTTTCAAATGTTTGA--TTTTTCTAAATCTACAAAAGAAATTTCACATTTAC---TCCTGTATCATTTCTTGGGATTGAGAACAACTAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80562766 180 + 95678458 AACAATAGCATGAACA--TTTTATTTCTGTGGATAAAATGTGCCCATTTCTCATG--------GATATCTG-AAGGTTTTTGCCCTGTGTTTTCTACTTTCTATTTTTTCAAATGTTCGATTTTTTTCTAAATCTACAACAGAAATTTCAAATTTAC---TTCTGTATCATTTCTTGGGATTGAGAACAACTAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80989598 180 - 96509753 AACAATAGCATGAACA--TTTTATTTCTGTGGATAAAATGTGCCCATTTCTCATG--------GATATCTG-AAGGTTTTTGCCCTGTGTTTTCTACTTTCTATTTTTTCAAATGTTCGATTTTTTTCTAAATCTACAACAGAAATTTCAAATTTAC---TTCTGTATCATTTCTTGGGATTGAGAACAACTAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76246712 180 + 90941950 AACAATAgcatgaaca--ttttatttctgtggataaAATGTGCCCATTTCTCATG--------GATATCTG-AAGGtttttgccctgtgttttctactttctattttttcaaatgttcgatttttttctaaatctacaACAGAAATTTCAAATTTAC---TTCTGTATCATTTCTTGGGATTGAGAACAACTAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18516181 180 + 33263144 AACAATAGCATGAACA--TTTTATTTCTGTGGATAAAATGTGTCCATTTCTCATG--------GATATCTG-AAGATTTTTGCCCTGTGTTTTCTACTTTCTATTTTTCCAAATGTTCGATTTTTTTCTAAATCTACAACAGAAATTTCAAATTTAC---TTCTGTATCATTTCTTGGGATTGAGAACAACTAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198221111 172 + 210400635 AACAACAGCATGAACA--TTTTATTTCTGTGGATAAAATGTGCCCATTTCTCATA--------AATACCTGAAAGGTTTTTGCCCTGTGCTTTCTACTTTCTAGTTTTTCAAATTTTTGA-TTTTCTCTAAATCTACAAAATAAATTTCTAATTTAC---TTCTGTATCATTTCTTGGGATTGAGA-------- i calJac3.chr1 C 0 C 0 s mm10.chr15 77087424 175 + 104043685 AATCACACATAAAACAGTGTTTATTCCTGTAGA------AGGCCCACATCCCATGTCAGCTCAAGTATCCC-ATTCTTTCCCCCCTTTGAATGCTCATTTTTTTTTTTTT------------TTTTGCTAACTTTGCAAGAGATATTCTACATTTCCAGTTTTTGGGCCATTTTTTAGGGTTGAAGAGATGTGT i mm10.chr15 C 0 I 173 e canFam3.chr10 40845779 165 - 69331447 I a score=306083.000000 s hg38.chr22_KI270876v1_alt 68940 107 + 263666 TTTCTAAGGGGACCCCTGTTCTTCTTAACCAT----CTTGCATGGCAAGTCCTAGCTTGCTTCTTTTATT--TGTTACCCCTTATTTTAGAAATACCTATAATTTCTTATGAG s panTro4.chr22 34446586 107 + 49737984 TTTCTAAGGGCACCCCTGTTCTTCTTAACCAT----CTTGCATGGCAAGTCCTAGCTTGCTTCTTTTATT--TGTTACCCCTTATTTTAGAAATACCTATAATTTCTTATGAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30862775 109 + 46535552 TTTCTAATGGGACCCCTGTTCTTCTTAACCAT----CTTACATGGCAGGTCCTAGCTTGCTTCTTTTATTTCTGTTACACCTTATTTTAGAAATACCTATAATTTCTTATGAG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100415151 109 - 115148730 TTTCTAATGGGACCCCTGCTCTTCTTAACCAT----CTTACGTGGCAGGTCCTAGCATGCTTCTTTTATTTCTGTTACACCTTATTTTAGAAATACCTATAATTTCTTATGAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80562946 109 + 95678458 TTTCTAATGGGATCCCTGCTCTTCTTCACCAT----CTTATGTGGCAGGTGCTAGCTTGCTTCTTTTATTTCTGTCACACCTTAATTTAGAAATACCTATAATTTCTTATGAG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80989778 109 - 96509753 TTTCTAATGGGATCCCTGCTCTTCTTCACCAT----CTTATGTGGCAGGTGCTAGCTTGCTTCTTTTATTTCTGTCACACCTTAATTTAGAAATACCTATAATTTCTTATGAG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76246892 108 + 90941950 TTTCTAATGGGATCCCTGCTCTTCTTCACCAT----CTTATGTGGCAGGTGCTAGCttgcttcttttatttctgtcacACCTTAA-TTAGAAATACCTATAATTTCTTATGAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18516361 109 + 33263144 TTTCTAATGGGATCCCTGCTCTTCTTCACCAT----CTTATGTGGCAGGTGCTAGCTTGCTTCTTTTATTTCTGTCACACCTTAATTTAGAAATACCAATAATTTCTTATGAG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198221283 109 + 210400635 ----TAATGGGATCCCTGTTCTTCTTAGCCATCTTACTTACATGGCAGGTCCTAGCTTGCTTCTTTTATTTCTGTTACACCTTATTTTAGAAATACCTGTAATTTCTTATGAG i calJac3.chr1 C 0 C 0 e mm10.chr15 77087599 173 + 104043685 I e canFam3.chr10 40845779 165 - 69331447 I a score=556254.000000 s hg38.chr22_KI270876v1_alt 69047 177 + 263666 CTTCTAA--AGCCTTTTGCTTCTTC---------------------CTTATATAATTTATGCTTTCTCTAAATGAAG-AAACTGCATTGTGA---GGGAAATTTATTC--------CTGCTCTTCAAGTTTATGCTGCTTGAAGTCAGGGT----AGTTTCAAATGTACTTAAAAAAATCCCTGACTGGCTTTCAGTGGTTATACATTATTCCTCC s panTro4.chr22 34446693 177 + 49737984 CTTCTAA--AGCCTTTTGCTTCTTT---------------------CTTATATAATTTATGCTTTCTCTAAATGAAG-AAACTGCATTGTGA---GGGAAATTTATTC--------CTGCTCTTCAAGTTTATGCTGCTTGAAGTCAGGAT----GGTTTCAAATGTACTTAAAAAAATCCCTGACTGGCTTTCAGTGGTTATACATTATTCCTCC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30862884 177 + 46535552 CTTCTAA--AGCCTTTTGCTTCTTT---------------------CTTATATAATTTATGCTTTCTCTAAACGAAG-AAACTGCATTGTGA---GGGAAATTTATTC--------CTGCTCTTCAAGTTTATGCTGCTTGAAGTCAGGAT----AGTTTCAAATGTACTTTAAAAAATCCCTGACTGGCTTTCAGTGGTTATACATTATTCCTCC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100415260 177 - 115148730 CTTCTAA--AGCCTTTTGCTTCTTT---------------------CTTACATAATTTGTTCTTTCTCTAAATGAAG-AAACTGCATTGTGA---GGGAAATTTATTC--------CTGCTCTTCAAGTTTATGCTGCTTGAAGTCAGGAT----AGTTTCAAATGTACTTTAAAAAATCCCTGACTGGCTTTCAGTGGTTATACATTATTCCTCC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80563055 177 + 95678458 CTTCTAA--AGCCTTTTGCTTCTTT---------------------CTTATATAATTTATGCTTTCTCTAAATGAAG-AAACTGCACTGTGAG--GGGAAATTTATTC--------CTGCTCTTCAAGTGTATGCTGCTTGAACTCAGGAT----AGTTTCAAATGTACTTTAAAAAATCCCTGACTGGCTTTCAGTGGTTATACATTATTCCT-C i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80989887 178 - 96509753 CTTCTAA--AGCCTTTTGCTTCTTT---------------------CTTATATAATTTATGCTTTCTCTAAATGAAG-AAACTGCACTGTGAG--GGGAAATTTATTC--------CTGCTCTTCAAGTGTATGCTGCTTGAACTCAGGAT----AGTTTCAAATGTACTTTAAAAAATCCCTGACTGGCTTTCAGTGGTTATACATTATTCCTCC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76247000 178 + 90941950 CTTCTAA--agccttttgcttcttt---------------------cttatataatttttgctttctctAAATGAAG-AAACTGCACTGTGAG--GGGAAATTTATTC--------CTGCTCTTCAAGTGTATGCTGCTTGAACTCAGGAT----AGTttcaaatgtactttaaaaaatcccTGACTGGCTTTCAGTGGTTATACATTATTCctcc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18516470 178 + 33263144 CTTCTAA--AGCCTTTTGCTTCTTT---------------------CTTATATAATTTATGCCTTCTCTAAATGAAG-AAACTGCACTGTGAG--GGGAAATTTATTC--------CTGCTCTTCAAGTGTATGCTGCTTGAACTCAGGAT----AGTTTCAAATGTACTTTAAAAAATCCCTGACTGGCTTTCAGTGGTTATACATTATTCCTCC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198221392 173 + 210400635 CTTCTGT--AGACTTTTGCTTCTTT---------------------C-----TAATTTGTGCTTTCTCTAAATGAAG-AAACTGCACTGTGAG--AGGACACTTACTC--------CTGCTCTTCAAGTTTATGCTGCTTGAAGTCAGGAT----GGTCTCAAATGTACTTAAAAAAATCCCCGACTGGCTTTCAGTGATTATACATTATTCCTCA i calJac3.chr1 C 0 C 0 s mm10.chr15 77087772 212 + 104043685 CTTCTAATGGGACCCTTGCCTTTCCATACCTAGCAGTTCTGTGTGGCTTCCCTGATTCCTGATACCTTTCATTGTGGAAAATTATTTTATGAGCTTGTAAGTTTTCTCACCTCATATGGCTCTCCCAGTCTACGCTGTAAGAATTCAGGGTCAGCAGCTTCAGATACACATTTAAAGCGC----ACTGGCTCTTAGCTGCTACGCAGCACTCCTTT i mm10.chr15 I 173 C 0 e canFam3.chr10 40845779 165 - 69331447 I a score=475508.000000 s hg38.chr22_KI270876v1_alt 69224 158 + 263666 TTTGTTTTTCAAATGAGTGACTTAGAAAGTAAACATTTCCTTCTTAATTACGAATTCTTCCAGAGATATA------T----------GAAGAC---------TCT-AATTAATATTACCAAACACTGACAATGAAATGGTAATGAATGGGAACATGGCA-GGAAGCACCCTTGGG------GGCCGTTTCT s panTro4.chr22 34446870 158 + 49737984 TTTGTTTTTCAAATGAGTGACTTAGAAAGTAAACATTTCCTTCTTAATTACGAATTCTTCCAGAGATATA------T----------GAAGAC---------TCT-AATTAATATTACCAAACACTGACAATGAAATGGTAATGAATGGGAACATGGCA-GGAAGCACCCTTGGG------GGCCATTTCT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30863061 158 + 46535552 TTTGTTTTTCAAGTGAGTGAGTTAGAAAGTAAACATTTCCTTCTTAATTATGAATTCTTCCAGAGATATA------C----------GAAGAC---------TCT-AATTAATATTACCAAACACTGACAATGAAATGGTAATGAATGGGAACACGGCA-GGAAGCACCCTTGGG------GGCCGTTTCT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100415437 158 - 115148730 TTTGTTTTTCAAATGAGTGACTTAGAAAGTAAACATTTCCTTCTTAATTACGAATTCTTCCAGAGATATA------T----------GAAGAC---------TCT-AATTAATATTACCAAACACTGACAATGAAATGGTAATCAATGGGAACATGGCA-GGAAGCACCCTTGGG------GGCCGTTTCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80563232 155 + 95678458 TTTGTTTTTCAAATGAGTGACTTAGAAAGTAAA-ATTTCCTTCCTAATCACAAACCCTTCTAGAGATATA------T----------GAAGA-----------CT-AATTAATATTGCCAAACACTGACAATGAAATGGTAATGAATGGGAACATGGCA-AGAAGCACCCTTGGG------GCCCATTTCT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80990065 155 - 96509753 TTTGTTTTTCAAATGAGTGACTTAGAAAGTAAA-ATTTCCTTCCTAATCACAAACCCTTCTAGAGATATA------T----------GAAGA-----------CT-AATTAATATTGCCAAACACTGACAATGAAATGGTAATGAATGGGAACATGGCA-AGAAGCACCCTTGGG------GCCCATTTCT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76247178 155 + 90941950 tttgtttttcaaatgagtGACTTAGAAAGTAAA-ATTTCCTTCCTAATCACAAACCCTTCTAGAGATATA------T----------GAAGA-----------CT-AATTAATATTGCCAAACACTGACAATGAAATGGTAATGAATGGGAACATGGCA-AGAAGCACCCTTGGG------GCCCATTTCT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18516648 157 + 33263144 TTTGTTTTTCAAATGAGTGACTTAGAAAGTAAA-ATTTCCTTCCTAATCATGAACCCTTCTAGAGATATA------T----------GAAGAC---------TCT-AATTAATATTGCCAAACACTGACAATGAAATGGTAATGAATGGGAACATGGCA-AGAAGCACCCTTGGG------GCCCATTTCT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198221565 174 + 210400635 TTTGTTTTTCAAGTGAGCGACTTAGAAAGTAAACATTTCCTTCTTAATTACAAATTCTTCTACAGGTCTATTCTTCT----------ACAGGTCTTTGGTAATAT-AATTAATATTACCAAACACTGACGATGAAATGGTAACGAATGTGAAAATGGCATAAAAGCACCCTTGGG------GGCCGTTTCT i calJac3.chr1 C 0 C 0 s mm10.chr15 77087984 116 + 104043685 GCTGTC----------------------------------------------ACCCTTTCTACAGGTGCA------G----------GGACAG---------TCTGAGTTACCATTATCAGACCCTG-TAATGACATGGCCA--AAGTGGAGTGTGGCA-GGAAGCATCCTTGTGACTTTCAGCCATATCT i mm10.chr15 C 0 I 120 s canFam3.chr10 40845944 126 - 69331447 -----------------------------------TTTCTTTCTCAATTACAAATTCTTCCACAGATATC------CGTATAAATTAGAAGAT---------TCT-AATTAATATTACCAGACACTGACAATGACATGGC------TAGAAACATAGCA-GGAAGCACGCTCAGG------A-CTGTGTGT i canFam3.chr10 I 165 C 0 a score=18342.000000 s hg38.chr22_KI270876v1_alt 69382 5 + 263666 GATCA s panTro4.chr22 34447028 5 + 49737984 GATCA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30863219 5 + 46535552 GATCA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100415595 5 - 115148730 GATCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80563387 5 + 95678458 GATCA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80990220 5 - 96509753 GATCA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76247333 5 + 90941950 GATCA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18516805 5 + 33263144 GATCA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198221739 5 + 210400635 GGTCA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40846070 5 - 69331447 GATCC i canFam3.chr10 C 0 C 0 e mm10.chr15 77088100 120 + 104043685 I a score=242442.000000 s hg38.chr22_KI270876v1_alt 69387 99 + 263666 ACATGGTTCCTTGGAATTCTAGCCAG-------------------------------GATCTGGGCAAAGCTGTAAATCCTGGCCACAACATA-----ATTAAACTAACTAAAGTATTTCTTTA-------CCTTTTTTTTT s ponAbe2.chr22 30863224 99 + 46535552 ACATGGTTCCTTGGAATTCCAGCCAG-------------------------------GATCTGGGCAAAGCTGTACATCCTGGCCACAACATA-----ATTTAACTAACTAAAGTATTTCTTTA-------CCTTTTTTTTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100415600 114 - 115148730 ACATGGTTCCTTGGAATTCTAGCCAGGTCTATGCAAATGGGCAGGCCA-----GACAGATCTGGGCAAAGCTGTACACTCTGGCCACAACATA-----ATTTAAC---------TATTTCTTTC-------CC--TTTTTTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80563392 126 + 95678458 ACATGGTTCCTCGGAATTCTAGCCAGGTCTATGGAAATGGGCAGGCCA-----GACAGATCTGGGCAAAGCTGTACATCCTGGCCACAACATA-----ATTTAACTAACTAAAGTATTTCTTTA------CCTTTTTTTTTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80990225 125 - 96509753 ACATGGTTCCTCGGAATTCTAGCCAGGTCTATGGAAATGGGCAGGCCA-----GACAGATCTGGGCAAAGCTGTACATCCTGGCCACAACATA-----ATTTAACTAACTAAAGTATTTCTTTA-------CTTTTTTTTTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76247338 121 + 90941950 ACATGGTTCCTCGGAATTCTAGCCAGGTCTATGGAAATGGGCAGGCCA-----GACAGATCTGGGCAAAGCTGTACATCCTGGCCACAACATA-----ATT----TAACTAAAgtatttcttta-------ccttttttttt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18516810 127 + 33263144 ACATGGTTCCTCGGAATTCTAGCCAGGTCTATGGAAATGGGCAGGCCA-----GACAGATCTGGGCAAAGCTGTACATCCTGGCCACAACATA-----ATTTAACTAACTGAAGTATTGCTTTAC-----CTTTTTTTTTTT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198221744 125 + 210400635 ACATGGTTCCTTGGAATTCTAGCCAGGTCTATGGAAATGGACAGGCTA-----GACAGATCTGGGCAAAGCCATACATCCTGGCCACAACATA-----ATTTAATTAACTAAAGTATGTCTTTA-------CCTTACTTTTT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40846075 136 - 69331447 ACATGTTTCCTGTGACACCTATCCGGGTTTATGAAATCGGGCAGGCCAATGCTGCTGTATCTGCGT----CTGTAACTCT--GCATCTACATATATACGTTATATAAACTAAAGGGTCTCTTTACATTATTCCTTTTTTTTT i canFam3.chr10 C 0 C 0 e mm10.chr15 77088100 120 + 104043685 I e panTro4.chr22 34447033 0 + 49737984 C a score=62003.000000 s hg38.chr22_KI270876v1_alt 69486 34 + 263666 TTT------------------------------AAGCATTTGTTAAACAAAGCAAATGTTAATT--- s ponAbe2.chr22 30863323 34 + 46535552 TTT------------------------------AAGCATTTGTTAAACAAAGCAAACGTTAATT--- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100415714 30 - 115148730 TTT------------------------------AAACATTTGTT----AAAGCAAACGTTAATT--- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80563518 35 + 95678458 TTT-----------------------------AAAGCATTTGTTAAACAAAGCAAACGTTAATT--- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80990350 35 - 96509753 TTT-----------------------------AAAGCATTTGTTAAACAAAGCAAACGTTAATT--- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76247459 35 + 90941950 ttt-----------------------------aaagcatttgttaAACAAAGCAAACGTTAATT--- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18516937 35 + 33263144 TTT-----------------------------AAAGCATTTGTTAAACAAAGCAAACGTTAATT--- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198221869 64 + 210400635 TTTAAGCATCTAAAACAGGAAATGAAGCAGTAAAAGCATTTGTTAAACAAAGCAAATGTTAATT--- i calJac3.chr1 C 0 C 0 s mm10.chr15 77088220 33 + 104043685 ------------------------------TGAAAACATTGGTTAGA-GAACAAAAAGCTCATG--- i mm10.chr15 I 120 I 3 s canFam3.chr10 40846211 63 - 69331447 TTT-AAACTTCTAAAGAGGACATAAAGCAGGAAAAGCATTTGTTAGA-ACACCAA--GCTCATCTTT i canFam3.chr10 C 0 C 0 e panTro4.chr22 34447033 0 + 49737984 C a score=2256215.000000 s hg38.chr22_KI270876v1_alt 69520 694 + 263666 ACAGTTGGAATTTTAACACTAAAATGAACCCT--AG------TAATTTTTCATTATAACTAGAGATGGTTCCATTA-GTTTAGAATTT--GTTTGCTAGTGTAAAGT-TACAGCAGGGCTA--TTTAGTAAAACTTCTTTGCAAACAAGG---------GTAATTC--------AGCATTTTA--------CTCTTTAGTATTACTCCAACCATCAAAGTAACATT-AAAAAAATTTTAAAGTTAAGGCAACAAAAGCAGTTAAAGCCCAATTCATGTTTACCTAGGTAAAAAAATTAAAAACTGAAGTCTTATGCCATACGGCAGAGGTATAAATTCTTGCAAAGGGATACTGAGGTTCAAAAGTACTCAACCAAGGGTAGGTTTCACACCTGACTCTCAGGAAGACTGAGTGAGG---TACTGGAGGTACGATCTCTGAGTATTCTATCAAATCATGGCTTTAAGCTGTATTCT----------TAAAAAACAGGTTCTAAGTGAGGTTGCTGACAGAACCAATTTCCCCTCATTTTCCTAGGCCTACAGGAAGCCATAGGAACCTTGGTGGTTTAGGAGTAATGTTACTGCTAATCAAAACAATTC-AAATGGATCAGACTATGGAAAAGAATCTTCCTTCCAATCCAGAAGGAGATGGAGAGAATCTATCTGTAGCGGTTTCCTTCTTTGATAAGTCAAGTCTGACTTTGAAGTTTAAACATGATGAAGTTCTCTGCTTTTCAA s panTro4.chr22 34447033 704 + 49737984 ACAGTTGGAATTTTAACACTAAAATGAACCCT--AA------TAATTTTTCATTATAACTAGAGATGGTTCCATTA-GTTTAGAATTT--GCTTGCTAGTGTAAAGT-TACAGCAGGGCTA--TTTAGTAAAACTTCTTTGCAAACAAGG---------GTAATTC--------AGCATTTTA--------CTCTTTAGTATTACTCCAACCATCAAAGTAACATT-AAAAAAATTTTAAAGTTAAGGCAACAAAAGCAGTTAAAGCCCAATTCATGTTTACCTAGGTAAAAAAATTAAAAACTGAAGTCTTATGCCATACGGCAGAGGTATAAATTCTTGCAAAGGGATACTGAGCTTCAAAAGTACTCATCCAAGGGTAGGTTTCACACCTGACTCTCAGGAAGACTGAGTGAGG---TACTGGAGGTAGGATCTCTGAGTATTCTATCAAATCATGGCTTTAAGCTGTAGTCTACTCATTCTGGAAAAAACAGGTTCTAAGTGAGGTTGCTGACAGAACCAATTTCCCCTCATTTTCCTAGGCCTACAGGAAGCCATAGGAACCTTGGTGGTTTAGGAGTAATGTTACTGCTAATCAAAACAATTC-AAATGGATCAGACTATGGAAAAGAATCTTCCTTCCAATCCAGAAGGAGATGGAGAGAATCTATCCGTAGCGGTTTCGTTCTTTGATAAGTCAACTCTGACTTTGAAGTTTAAACATGATGAAGTTCTCTGCTTTTCAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30863357 704 + 46535552 ACAGTTGGAATTTTAACACTAAAATGAACCCT--AG------TAATTTTTCATTATAACTAGAGATGGTTCCATTA-GTTTAGAATTT--GTTTGCTAGTGTAAAGT-TACAGCAGGGCTA--TTTAGTAAAAATTCTTTGCAAACAAGG---------GTAATTC--------AGCATTTTA--------CTCTTTCGTATTACTCCAATCATCAAAGTAACATT-AAAAAAATTTTAAAGTTAAGGCAGTAAAAGCAGTTAAAGCCCAATTCATGTTTACCTAAGTAAAAAAATTAAAACCTGAAGTCTTATGCCATATGGCAGAGGTATAAATTCTTGCAAAGGGATACTGAGGTTCAAAAGTACTCATCCAAGGGTAGGTTTCACCCCTGACTCTCACGGAGACTGAGTGAGG---TACTGGAGGTACGATCTCTGAGTATTCTATCAAATCATGGCTTTAAGCTGTATTCTACTCATTCTGGAAAAAACAGGTTCTAAGCGAGGTTGCTGACAGACCCAATTTCCCCTCATTTTCCTAGGCCTACAGGAAGCCATCGGAACCTTGGTGGTTTAGGAGTAATGTTACTGCTAATCAAAACAATTC-AAATAGATCAGACTATGGAAAAGAATCTTCCTTCCAATCCAGAAGGAGATGGAGAGAATCTATCTGTAGCAGTTTCCTTCTTTGATAAGTCAACTCTGACTTTGAAGTTTAAACATGATGAAGTTCTCTGCTTTTCAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100415744 703 - 115148730 ACAGTTGGAATTTTAACACTAAAATGAACCCT--AG------TAATTTTTCATTATAACTAGAGATGGTTCCATTA-GTTTAGAATTT--GTTTGCTAGTGTAAAGT-TACAGCAGGGCTA--TTTAGTAAAACTTCTTTGCAAACAAGG---------GTAATTC--------AGCATTTTA--------CTCTTTAGTATTACTCCAACCATC-AAGTAACATT-AAAAAAATGTTAAAGTTAGGGCAATAAAAGCAGTTAAAGCCCAATTCATGTTTACCTAAGTAAAAAAATTAAAAACTGAAGTCTTATGCCATATGGTAGAGGTATAAATTCTTGCAAAGGGATACTGAGGTTCAAAAGCACTCATCCAAGGGTAGGTTTCACACCTGACTCTCAGGAAGACTGAGTGAGG---TACTGGAGGTACGATCTCTGAGTATTCTATCAAATCATGGCTTTGAGCTGTATTCTACTCATTCTGGAAAAAACACGTTCTAAGTGAGGTTGCTGACAGAACCAATTTCCCCTCATTTTCCTAGGCCTACAGGAAGCCATTGGAACCTTGGTGGTTTAGGAGTAATGTTACTGCTACTCAAAACAATTC-AAATGGATCAGACCATGGAAAAGAATCTTCCTTCCAATCCAGAAGGAGATGGAGAGAATCTATCTGTAGCAGTTTCCTTCTTTTATAAGTCAACTCTGACTTTGAAGTTTAAACATGATGAAGTTCTCTGCTTTTCAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80563553 718 + 95678458 ACAGTTGGAATTTTAACACTAAAATGAGCCCTAAAA------AAATTTTTCATTATAACTAGAGGTGGTTCCATTA-GTTTAGAATTT--GTTTGCTAGTGTAAAGT-TAGAGCAGGGCTA--TTTAGTAAAACTTCTTTGCAAACATTATACTCTT-TATAATGC-------AAGCATTATA--------CTCTTTAGTATTACTCCAAACATCAGAGTAACATTAAAAAAATTTTTAAAGTTAAGGCAATAAAAGCAGTTACAGCCCAATTCGTGTTTACCTAAGTAAAAACATTAAAAACTGAAGTCTTACACCATACGGCAGAGGTATGAATTCTTGCAAAGGGATATTGAGGTTCAAAAGTACTCATCCAAGGGCAGGTTTCACACCTGACTCTCAGGAAGACTGAGTGAGGTACTACTGGAGGTACGATCT-TGAGTATTCTAGCAAATCATGGCTTTGAGCTGTATTCTACCCATTCTGGAAAAAACAGGTTCTAAGTGAGGTTGCTGGCAGAATCAGTTTCCCCTCATTTTCCTAGGCCTACAGGAAGCCATCGGAACCGTGGTGGTTTAGGAGTAATGTTATTGCTAACCAAAACAATTC-AAATGGATCAGACTATGGAAAAGAATGTTCCTTCCAATCCTGAAGGAGATGGAGAGAATCTATCTGTAGCAGTTTCCTTCTTTTATAAGTCAACTCTGACTTTGAAGTTTAAACTTGATGAAGTTCGCTGATTTTCAA i rheMac3.chr10 C 0 I 75 s macFas5.chr10 80990385 716 - 96509753 ACAGTTGGAATTTTAACACTAAAATGAGCCCT--AG------TAATTTTTCATTATAACTAGAGGTGGTTCCATTA-GTTTAGAATTT--GTTTGCTAGTGTAAAGT-TAGAGCAGGGCTA--TTTAGTAAAACTTCTTTGCAAACATTATACTCTT-TATAATGC-------AAGCATTATA--------CTCTTTAGTATTACTCCAAACATCAGAGTAACATTAAAAAAATTTTTAAAGTTAAGGCAATAAAAGCAGTTACAGCCCAATTCGTGTTTACCTAAGTAAAAACATTAAAAACTGAAGTCTTACACCATACGGCAGAGGTATGAATTCTTGCAAAGGGATATTGAGGTTCAAAAGTACTCATCCAAGGGCAGGTTTCACACCTGACTCTCAGGAAGACTGAGTGAGGTACTACTGGAGGTACGATCT-TGAGTATTCTAGCAAATCATGGCTTTGAGCTGTATTCTACCCATTCTGGAAAAAACAGGTTCTAAGTGAGGTTGCTGGCAGAATCAGTTTCCCCTCATTTTCCTAGGCCTACAGGAAGCCATCGGAACCGTGGTGGTTTAGGAGTAATGTTATTGCTAACCAAAACAATTC-AAATGGATCAGACTATGGAAAAGAATGTTCCTTCCAATCCTGAAGGAGATGGAGAGAATCTATCTGTAGCAGTTTCCTTCTTTTATAAGTCAACTCTGACTTTGAAGTTTAAACTTGATGAAGTTCGCTGATTTTCAA i macFas5.chr10 C 0 I 4 s papAnu2.chr10 76247494 700 + 90941950 ACAGTTGGAATTTTAACACTAAAATGAGCCCT--AG------TAATTTTTCATTATAACTAGAGGTGGTTCCATTA-GTTTAGAATTT--GTTTGCTAGTGTAAAGT-TAGAGCAGGGCTA--TTTAGTAAAACTTCTTTGCAAACATTATACTCTT-TATAATGC-------AAGCATTATA--------CTCTTTAGTATTACTCCAAACATCAgagtaacatt-aaaaaatttttaaagttaaggtaataaaagcagttacag---------------cctaagtaaaaacattaaaaactgaaGTCTTACACCATACGGCAGAGGTATGAATTCTTGCAAAGGGATATTGAGGTTCAAAAGTACTCATCCAAGGGCAGGTTTCACACCTGACTCTCAGGAAGACTGAGTGAGGTACTACTGGAGGTACAATCT-TGAGTATTCTAGCAAATCATGGCTTTGAGCTGTATTCTACCCATTCTGGAAAAAACAGGTTCTAAGTGAGGTTGCTGGCAGAATCAGTTTCCCCTCATTTTCCTAGGCCTACAGGAAGCCATTGGAACCGTGGCGGTTTAGGAGTAATGTTACTGCTAACCAAAACAATTC-AAATGGATCAGACTATGGAAAAGAATGTTCCTTCCAATcctgaaggagatggggagaatcTATCTGTAGcagtttccttcttttataaGTCAACTCTGACTTTGAAGTTTAAACCTGATGAAGTTCGCTGATTTTCAA i papAnu2.chr10 C 0 I 4 s chlSab2.chr19 18516972 713 + 33263144 ACAGTTGGAATTTTAACACTAAAATGAGCCCT--AG------TAATTTTTCATTATAACTAGAGGTGGTTCCATTA-GTTTAGAATTT--GTTTGCTAGTGTAAAGT-CAGAGCAGGGCTA--TTTAGTAAAACTTCTTTGCAAACATGATACTCTT-TATAATGC-------AAGCATTATA--------CTCTTTAGTATTACTCCAAACATCAGAGTAACATT-AAAAAATTTTTAAAGTTAAGGCAATAAAAGCAGTTACAGCCCAATTCGTGTTTACCTAAGTAAAAACATTAAAAACTGAAGTCTTACACCATACGGCAGAGGTATGAATTCTTGCAAAGGGATATTGAGGTTCAAAAGTACTCATCCAAGGGCAGGTTTCACACCTGACTCTCAGGAAGACTGAGTGAGGTACTACTGGAGGTACGATCT-TGAGTATTCTAGCAAATCACGGCTTTGAGCTGTATTCTACCCATTCTGGAAAAAACAGGTTCTAAGTGAGGTTGCTGGCAGAATCAGTTTCCCCTCATTTTCCTAGGCCTACAGGAAGCCATCGGAACCGTGGTGGTTTAGGAGTAATGTTATTGCTAACCAAAACAATTC-AAATGGATTAGACTATGGAAAATAATGTTCCTTCCAATCCTGAAGGAGATG--GAGAATCTATCTGTAGCAGTTTCCTTCTTTTATAAGTCAACTCTGACTTTGAAGTTTAAACTTGATGAAGTTCTCTGATTTTCAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198221933 699 + 210400635 ACAGTTGGAATTTTAACACTAAAATAAACCCT--AG------TAATTTTTCATTATACCTAGAGATGGCTCCATTC-ATTTAGAATTC--GTTTGCTAGTGTAACTT-TACAGCAGGGCTA--TTTAGTAAAACTTCTTTGCAAACAGG----------GTAATTC--------AGCATTATA--------CTCTTTAGTACTACTTCAAACATCAAAGTATC----AAAAATTTGTAAAAGTTAAAGCAATAAAAGCAGTGAAAGCCCAATTCATGTTTACCTAAGTAAAAAAATTACAAATTGAAGTCTTATGCCATATGGCAGAGGTATAAATTCTTGCAAAGGGATACTGAGGTTCAAAAGTACTCAGTCAAGGGTAGTCTTCACACCTGACTCCCAGGAAATCTGAGTGAAG---TACTGGAGGTACAATCTTTGAGTACTCTATCATATCATAGCTTTGAGCTGTATTCTACTCATTCTGGAAAAAAGAGGTTCTAAGTGAGGTTGCTGACAGAACCAATTTCCCCTCATTTTCCTAGGCCTACAGTAAGCCATCAGAACCTCAGTGGTTTAGGAGTAATGCTATTGCTAACC-AAACAATTC-AAATGGATCAGATTATGGAAAAGAATCCTCCTCCCAGTCCAGAAGGAGACAGAGAGACGCTATCTGTAGTGGTTTTCTTCTTTTATAACTGAACTCTGACTTTGAAGTTTAAATTTGATGAAGTTCTCTGCTTTTCAT i calJac3.chr1 C 0 C 0 s mm10.chr15 77088256 487 + 104043685 ATAGCTCAGTCTTTACCTGGATCATGAAGGCT----------CAGCTGTTCAGTCTATGTAGATATGGTTCCATTT--TTCAGAAT---------------GGAAGC-TGAATC---------TTTAGTGAGCTGTCTTTGTAATAAAGGTACTTTGATACTATGC--------------TTT--------CTCTTCAGCATTCCTTCAAACACCAAGATAATCTT-CACAATTTTAGAACTTTAAGATAGTGAAAGCAACTACATCTTGGTCTATGCTTAGCTAGGTATAGCATTTACAGACTGAAG-----------------------CAGGTTCTTTCTGATGG---TTTAGATTC---AGGGCTGACCCGGGGG--AGCTTGGCGGC----------------------------TAC---------------TGCATGCTGTCTCCAATTGCAGCTCTGAGTCGTGG-CTGCTAA--CAGGGAGGATGGGCTCCTAAGCAAGGCAACTGACAGCAATGGTTCCCTC-------------------------------------AGTGGCTTAGG----------------------------------------------------------TCCTTCCTATCAGGGAAGAAGTG----GGCCTTCTTCATTGCAGTAATTTGCTTTCACGAGCAGGCACTGACTTTGGGGTCTGAA------------------------- i mm10.chr15 I 3 C 0 s canFam3.chr10 40846274 692 - 69331447 ATAGTTGAAA--TCAAGCTTTAAATGAACCTT--TAAAGGCTCATTTTTTCATTATAACTACAGGTGATTCCATGAAGTTTAGAACTGAAGTTTGTTGGTGTTAAGTCTACAGCAGGGCTGTCTTCAGTAAAACTTCTTTGTAAACAAGT---------ATGATGTGGTAAACAAGCAGTATGTGGTTTGTCTCTTTAGCATTCCTTCAAACACCAAAATCATCTT-TAAAAATTTAAAAAGTCAAGGCAATAAAAGCAGTTAAAGCCCAATTTATGCTTATTTGAGCAAAATATTTAAAAACTGAAGTTCTATGCCATTGGACTGA-GTATACATTCTCATTAAGGGATTCTGAGGCTTGAAAGCACTGACCTCA-------CTTTATA---AAGTCTCAGGAA---------------AGTCAGAGATAC------TGGGGATTCTATCAAATGGTAGCTCTGAGCAGTAGTGCACTAATTCTGGAGAAAG-AGGTTCTGAATAAGGTCACTG--AGAACCA-CTTCCCCTTATCTTCCTCAACCTGTAAGAAGCCTGCAGAACCTTAATGATTTTGGGGTGATGTTACTGTTAACCAAAGCAACTCAAAATAGATCAGATTGTGAGGAAGCAGCTTCCTTCCAAACC---AGGAGACAGGGAGA--TTATGTGCAGTAGTTTCCTTCTATTTTAAGTGAACTTGGACTTTGGAGTTTGAATTTGATGAGGTTCTTTGCATTTAA- i canFam3.chr10 C 0 C 0 a score=14721.000000 s hg38.chr22_KI270876v1_alt 70214 8 + 263666 GTGGAAGA s panTro4.chr22 34447737 8 + 49737984 GTGGAAGA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30864061 8 + 46535552 GTTGAAGA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100416447 8 - 115148730 GTTGAAGA i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 80991105 7 - 96509753 -GCGAAGA i macFas5.chr10 I 4 I 30 s papAnu2.chr10 76248198 7 + 90941950 -GCGAAGA i papAnu2.chr10 I 4 I 32 s chlSab2.chr19 18517685 8 + 33263144 GTTGAAGA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198222632 8 + 210400635 GTTGAAGA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40846966 8 - 69331447 ATTCAGGA i canFam3.chr10 C 0 C 0 e mm10.chr15 77088743 0 + 104043685 C e rheMac3.chr10 80564271 75 + 95678458 I a score=7912693.000000 s hg38.chr22_KI270876v1_alt 70222 1952 + 263666 AAACAGAACAGGGTTGGCAAATACTTTACTGAAAAC--------------------------------------AAAAGGCTC---AAGAAT--------------ATCAGCACTAAGAAAAAACACATGAAGAG-TTTTTTTT-----AAAGCAGATG---ACTTTAACATGATTATTCTCCTGATTACTTTATAATAATGGCATTACAGAGAAACCTTTAAAA---GATGAACTAT-TTTAGGATAG-ATAGGCAATATCCTACTAAACTAACTTGGTAATTCACTAAT----GACTACT-CCAAAAGTAGAAAAATT-AATTGTGTATCATGGATGTATTC---------------CTCTCTCTCTCTCTTacacacacacacgc--------acacacacacatacacTTACTCGAA-AGTATTTTTGCTGCT-----------TTATTCAACAAAACATATCACAAAATGTGAGAAAAAGAAAATTCA--------GATATATTTATTTCTATTCCAGATTTCAAAGTGCATAGAAATTTCAGGCTGAGAAACCGTTTTTTCA------GCTTTCACTCTTACTAGCAAATCTAAAGGCTTTTAT----AAAACATGAGAACAAAGTGCAGTTTGAAACACCAAGGTTTTCATTACTGTTTCTTAAGTTTTTCAAAAAGAACAAGGGTGGGAA-GGAGGTAGAAGAGACAGGGTTCAGGCGTG-----GGGAGGGATATGGCGCCACATT--TATTAATCACATTAAAAACTAAGCATGCCAACATCTGGAGCT-AAACAACCAGCAAAATCACCACGTTCAGACTCGTATTGGCTAACTCTATCTATCCCAGCATTCTCTTGGGACAGCGGTTTGCCCTAGGCTCTACCACAAGCTCGGTGAAGTACACAGCCTCAATTACTAGAGCGTGCAGCCACAACGACCTGGTATTACGGAAACAGTCAGTCACCACTTGAGTTAACATTCCATACCCTAACGACTGGCCCCTCCCCAGCCCAAAGAAATAGTCAATCTTGCCCACCCTAGCCCTGGCCCACACCACAATGTTAATAATTATAACAAGCAGTAACCCATCTGTTATATCAGAGAAGGGAACAGAGACTCCACTGAGAGATTTAGAGTGAGATGTTAACATTTCTTCAGCTGACTGCacaaacaaacaaac------------aaaaaaaGAGGAGAAATAATTCATTTGGAGATATGAAGTCATGAAATAGCTGATGTGTATTGCTTTTAACCATGCACTGATGCAAAACTGAAGCAACCATTAATAATAAAAATTAAAAAGGACATATGTATTTACACACAATCAGACCTGTTTGATCTGAAGCAGTTTGCAGATTCTATCTGTGTGTGATTTGAAATAAAACAAAAAATGGGGATTAGCATGGCCACAGCACACCCTAATGTAGGAGGGCACACACGGACGGCTTTTTGGAACTCTGATAGCTGGATAAATTTGGCTTGGCTAAGCTTGATTCAGATACACACATGCCCCTTTAAAAAGAATTATTCTTATTCCTTTGCAATTCATTCTGAATGATACCTG-GTGTCCCCAGT-GGGGCTGCCCAGTGCTTCATCGCTCCCCTATTCAACCTGCCTGACACTGGCAATATAATTCAGTCCTGACCCACAGCACTCACATGTATGCTCGCCCTCTGTCAACAACCGTATATTCTAATCCACAGCATTCTGCTAAAATATTTCCTGTGTTTAGGAATTTTACTTTTTCACATATCTGTAACCTATCTCTGACTTCAAGTTCCAGCTTCT--TCAAAGGAAAATGCCTTTGAAAAGTTGGCTTTAAGATCCTTT-C--CAGTG-TTTTCTGCAGTTGTTAAAGT--CTCAGTTTTTCATGGCTCAATGTCATCTCCT-AGGGCTTTTCTAC-TCTGCTCTGAGCCAATTTTATCATCAAATTAACTTTATGATGTTGCCACGTTGACCACATGA-TCTTTCGGCACAGTTCTGTAGCTGGGTTTTAAACTAGAGCAAAATACAATAG-----AATATAATC----CCTCC--TATATCTGACCTTTATCTGCA-TATTTATTAGTTTAATCTCACACTGGC--AGACT s panTro4.chr22 34447745 1950 + 49737984 AAACAGAACAGGGTTG-CAAATACTTTACTGAAAAC--------------------------------------AAAAGGCTC---AAGAAT--------------ATCAGCATTAAGAAAAAACACATGAAGAG-TTTTTTTT-----AAAGCAGATG---ACTTTAACATGATTATTCTCCTGATTACTTTATAATAATGGCATTACAGAGAAACCTTTAAAA---GATGAACTAT-TTTAGGATAG-ATAGGCAATATCCTACTAAACTAACTTGGTAATTCACTAAT----GACTACT-CCAAAAGTAGAAAAATT-AATTGTGTATCATGGATGTATTC---------------CTCTCTCTCTCTCTcacacacacacacgc--------acacacacacatacacTTACTCGAA-AGTATTTTTGCTGCT-----------TTATTCAACAAAACATATCACAAAATGTGAGAAAAAGAAAATTCA--------GATATATTTATTTCTATTCCAGATTTCAAAGTGCATAGAAATTTCAGGCTGAGAAACCGTTTTTTCA------GCTTTCACTCTTACTAGCAAATCTAAAGGCTTTTAT----AAAACATGAGAACAAAGTGCAGTTTGAAACACCAAGGTTTTCATTACTGTTTCTTAAGTTTTTCAAAAAGAACAAGGGTGGGAA-GGAGGTAGAAGAGACAGGGTTCAGGCGTG-----GGGAGGGATATGGCGCCACATT--TATTAATCACATTAAAAACTAAGCATGCCAACATCTGGAGCT-AAACAACCAGCAAAATCACCACGTTCAGACTCGTATTGGCTAACTCTATCTATCCCAGCATTCTCTTGGGACAGCGGTTTGCCCTAGGCTCTACCACAAGCTCGGTGAAGTACACAGCCTCAATTACTAGAGCGTGCAGCCACAACGACCTGGTATTACGGAAACAGTCAGTCACCACTTGAGTTAACATTCCATACCCTAACGACTGGCCCCTCCCCAGCCCAAAGAAATAGTCAATCTTGCCCACCCTAGCCCTGGCCCACACCACAATGTTAATAATTATAACAAGCAGTAACCCATCTGTTATATCAGAGAAGGGAACAGAGACTCCACTGAGAGATTTAGAGTGAGATGTTAACATTTCTTCAGCTGACTGCACAAACAAACAAAC------------AAAAAAAGAGGAGAAATAATTCATTTGGAGATATGAAGTCATGAAATAGCTGATGTGTATTGCTTTTAACCATGCACTGATGCAAAACTGAAGCAACCattaataataaaaattaaaaaGGACATATGTATTTACACACAATCAGACCTGTTTGATCTGAAGCAGTTTGCAGATTCTATCTGTGTGTGATTTGAAATAAAACAAAAAATGGGGATTAGCATGGCCACAGCACACCCTAATGTAGGAGGGCACACACGGACGGCTTTT-GGAACTCTGATAGCTGGATAAATTTGGCTTGGCTAAGCTTGATTCAGATACACACATGCCCCTTTAAAAAGAATTATTCTTATTCCTTTGCAATTCATTCTGAATGATACCTG-GTGTCCCCAGT-GGGGCTGCCCAATGCTTTATCGCTCCCCTATTCAACCTGCCTGACACTGGCAATATAATTCAGTCCTGACCCACAGCACTCACATGTATGCTCGCCCTCTGTCAACAACCGTATATTCTAATCCACAGCATTCTGCTAAAATATTTCCTGTGTTTAGGAATTTTACTTTTTCACATATCTGTAACATATCTCTGACTTCAAGTTCCAGCTTCT--TCAAAGGAAAATGCCTTTGAAAAGTTGGCTTTAAGATCCTTT-C--CAGTG-TTTTCTGCAGTTGTTAAAGT--CTCAGTTTTTCATGGCTCAATGTCATCTCCT-AGGGCTTTTCTAC-TCTGCTCTGAGCCAATTTTATCATCGAATTAACTTTATGATGTTGCCACGTTGACCACATGA-TCTTTCGGCACAGTTCTGTAGCTGGGTTTTAAACTAGAGCAAAATACAATAG-----AATATAATC----CCTCC--TATATCTGACCTTTATCTGCA-TATTTATTAGTTTAATCTCACACTGGC--AGACT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30864069 1951 + 46535552 AAACAGAACAGAGTTG-CAAATATTTTACTGAAAAC--------------------------------------AAAAGGCTCGAGAAGAAT--------------ATCAGCATTAAGAAAAAACACATTAATAG-TTTTTTTT-----AAAGCAGATG---ACTTTAACATGATTATTCTCCTGATTACTTTATAATAATGGCATTACAGAGAAACCTTTAAAA---GATGAACTAT-TTTAGGATAG-ATAGGCAATATCCTACTAAACTAACTTGGTAATTCACTAAT----GACTACT-CCAAAAGTAGAAAAATT-AATTGTGTATCATGGATGTATTC---------------CTCTCTCTCTCTCTCTcacacacacacac--------acacacacac--acTCTTACTCAAA-AGTATTTTTGCTGCT-----------TTATTCAACAAAACATATCACAAAATGTGAGACAAAGAAAATTCA--------GAAAAATCTATTTCTATTCCAGATTTCGAAGTGCATAGAAATTTCAGGCTGAGAAACCGTTTTTTCA------GCTTTCACTCTAACTAGCAAATCTAAAGGCTTTTAG----AAAACATGAGAACAAAGTGCAGTTTGAAACACCAAGGTTTTCATTATTGTTTCTTAAGTTTTTCAAAAAGAACAAGGGTGGGAA-GGAGGTAGAAGAGACAGGGTTCAGGCGTG-----GGGAGGGAAATGGCGCCACATT--TATTAATCACATTAAAAACTAAGCATGCCAACATCTGGAGCTAAAACAACCAGCAAAATCACCACGTTCAGACTCGTATTGGCTAACTCTATCTATCCCAGCATTCTCTTGGGACAGCGGTTTGCCCTAGGCTCTACCACAAGCTCGGTGAAGTACACAGCCTCAATTACTAGAGCGTGCAGCCACAACGACCTGGTATTACGGAAACAGTCAGTCACCACTTGAGTTAACATTCCATACCCTAACGACTGGCCCCTCCCCAGCCCAAAGAAATAGTCAATCTTGCCCACCCTAGCCCTGGCCCACACCACAATGTTAATAATTATAACAAGCAGTAACCCATCTGTTATATCAGAGAAGGGAACAGAGACTCCACTGAGAGATTTAGAGTGAGATGTTAACATTTCTTCAGCTGACTGCACAAACAAACAAAC------------AAAAAAAGAGGAGAAATAATTCATTTGGAGATATGAAGTCATGAAATAGCTGATGTGTATTGCTTTTAACCATGCACTGATGCAAAACTGAAGCAACCattaataataaaaattaaaaaGGACATATGTATTTACACACAATCAGACCTGTTTGATCTGAAGCAGTTTGCAGATTCTATCTGTGTGTGATTTGAAATAAAACAAAAAATGGGGATTAGCATGGCCACAGCACACCCTAATGTAGGAGGGCACACACGGACGGCTTTTTGGAACTCTGATAGCTGGATAAATTTGGCTTGGCTAAGCTTGATTCAGATACACACATGCCCCTTTAAAAAGAATTATTCTTATTCCTTTGCAATTCATTCTGAATGACACCTG-GTGTCCCCAGT-GGGGCCGCCCAATGCTCCATCGCTCCCCTATTCAACCTGCCTGACACTGGCAATATAATTCAGTCCTGACCCACAGCACTCACATGTATGCTCGCCCTCTGTCAACAACCGTATATTCTAATCCACAGCATTCTGCTAAAATACTTCCTGTGTTTAGGAATTTTACTTTTTCACATATCTGTAACATATCTCTGACTTCAAGTTCCAGCTTCT--TCAAAGGAAAATGCCTTTGAAAAGATGGCTTTAAGATCCTTT-C--CAGTG-TTTTCTGCAGTTGTTAAAGT--CTCAGTTTTTCATGGCTCAATGTCATCTCCTAAGGGCTTTTCTAC-TCTGCTCTGAACCAATTTTATCACCGAATTAACTTTATGATGTTGCCACGTTGACCACATGA-TCTTTTGGCACAGTTCTGTAGCTGGG-TTTAAACTAGAGCAAAATACAATAG-----AATATAATC----CTTCC---ATATCTGACCTTTATCTGCA-TATTTATTAG-TTAATCTCACACTGGT--AGACT i ponAbe2.chr22 C 0 I 464 s nomLeu3.chr7b 100416455 1946 - 115148730 AAACAGAACAGGGTTG-CAAATATTTTACTGAAAAC--------------------------------------AAAAGGCTCGAGAAGAAT--------------ATCAGCATTAAGAAAAAACACATTAATAGTTTTTTTTT-----AAAGCAGATG---ACTTTAACATGATTATTCTCCTAATTACTTTATAATAATGGCATTACAGAGAAACCGTTAAAA---GATGAACTAT-TTTAG----G-ATAGGCAATATCCTACTAAACTAACTTGGCAATTCACTAAT----GACTACT-CCAAAAGTAGAAA-----AATTGTGTATCATGGATGTATTC---------------CTCTCTCTGTCTCTcacacacacatgcac--------gcacacacac--acacTTACTCGAA-AGTATTTTTGCTGCT-----------TTATTCAACAAAACATATCATAAAATGTGAGACAAAGAAAATTCA--------GATATATTTATTTCTATTCCAGATTTCAAAGTGCATAGAAATTTCAGGCTGAGAAACCATTTTTTCA------GCTTTCACTCTTACTAGCAAATCTAAAGGCTTTTAT----AAAACATGAGAACAAAGTGCAGTTTGAAACACCAAGGTTTTCATTACTGTTTCTTAAGTTTTTCAAAAAGAACAAGGGTGGGAA-GGAGGTAGAAGAGACAGGGTTCAGGCGTG-----GGGAGGGATATGGCGCCACATT--TATTAATCACATTAAAAACTAAGCATGCCAACATCTGGAGCTAAAACAACCAGCAAAATCACCACGTTCAGACTCGTATTGGCTAACTCTATCTATCCCAGCATTCTCTTGGGACAGCGGTTTGCCCTAGGCTCTACCACAAGCTCGGTGAAGTACACAGCCTCAATTACTAGAGCGTGCAGCCACAACGACCTGCTATTACGGAAACAGTCAGTCACCACTTGAGTTAACATTCCATACCCTAACGACTGGCCCCTCCCCAGCCCAAAGAAATAGTCAATCTTGCCCACCCTAGCCCTGGCCCACACCACAATGTTAATAATTATAACAAGCAGTAACCCATCTGTTATATCAGAGAAGGGAACAGAGACTCCACTGAGAGATTTAGAGTGAGATGTTAACATTTCTTCAGGTGGGTGCacaaacaaacaaac------------aaaaaaaGAGGAGAAATAATTCATTTGGAGATATGAAGTCATGAAATAGCTGATGTGTATTGCTTTTAACCATGCACTGATGCAAAACTGAAGCAACCATTAATAATAAAAATTAAAAAGGACATATGTATTTACACACAATCAGACCTGTTTGATCTGAAGCAGTTTGCAGATTCTATCTGTGTGTGATTTGAAATAAAACAAAAAATGGGGATTAGCATGGCCACAGCACACCCTAATGTAGGAGGGCACACACGGACGGCTTTTTGGAACTCTGATAGCTGGATAAATTTGGCTTAGCTAAGCTTGATTCAGATACACACACACCCCTTTAAAAAGAATTATTCTTATTCCTTTGCAATTCATTCTGAATGACACCTG-GTGTCCCCAGT-GGGGCCGCCCAATGCTCCATCGCTCCCCTATTCAACCTGCCTGACACTGGCAATATAATTCAGTCCTGACCCACAGCACTCACATGTATGCTCACCCTCTGTCAACAACCGTATGTTCTAATCCACAGCATTCTGCTAAAATATTTCCTGTGTTTAGGAATTTTACTTTTTCACATATCTGTAACATATCTCTGACTTCAAGTTCCAGCTTCT--TCAAAGGAAAATGCCTTTGAAAAGTTGGCTTTAAGATCCTTT-C--CAGTG-TTTTCTGCAGTTGTTAAAGT--CTCAGTTTTTCATGGCTCAATGTCATCTCCT-AGGGCTTTTCTAC-TCTGCTCTGAACCAATTTTATCATCGAATTAACTTTATGATGCTGCCACACTGACCACATGA-TCTTTCGGCACAGTTCTGTAGCTGGGTTTTAAACTAGAGCAAAATACAATAG-----AATATAATC----CCTCC--TATATCTGACCTTTATCTGCA-TATTTATTAGTTTAATCTCACACTGGT--AGACT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80564346 1968 + 95678458 AAACAGAACAGGGTTG-CAGATATTTTACTGAAAAC--------------------------------------AAAAGGCCGGAGAAGAATATCAGCATTAAGAAATCAGCATTAAGAAAAAACACATTAATAG-TTTTTTGTTTTTTAAAGCAGATG---ACTTTAACATGATTATTCTCCTAATTACTTTATAATAACGGCATTACAGAGAAATCTTTAAAA---GAACAACTAT-TTTAGGATAA-ATAGGCAATATCCTACTAAACTAACTTGGTAATTCACTAAT----GGCTACT-CCAAAAGTAGAAAAATT-AATTGTGTGTCATGGATGTATTC-------------CTCTCTCTCTCTCTCTCTCACACAC--------------ACACACACAC--ACGCTTACTCGAA-AGTATTTCTGCTGCT-----------TTATTCAACAAAACATATCATAAAATGTAAGACAAAGAAAATTCA--------GATATATTTATTTCTATTCCAGATTTCAAAGTGCATAGAAATTTCAGGCTGAGAAACCATTTTTTCA------ACTTTCACTCTTACTAGCAAATCTAAAGGCTTTTAT----AAAACATGAGAACAAAGTGCAGTTTGAAACACCAAGGTTTTCATTACTGTTTCTTAAGTTTTTCAAAAAGAACAAGGGTGGGAA-GGAGGAGGAAGAGACAGGGTTCAGGCGTG-----GGGAGGGATATGGCGCCACATT--TATTAATCACATTAAAAACTAAGCATGCCAACATCTGGAGCTAAAACAACCAGCAAAATCACCACGTTCAGACTCGTATTGGCTAACTCTATCTATCCCAGCATTCTCTTGGGACAGCGGTTTGCCCTAGGCTCTACCACAAGCTCGGTGAAGTACACAGCCTCAATTACTAGAGCGTGCAGCCACAACGACCTGGTATTACGGAAACAGTCAGTCACCACTTGAGTTAACATTCCATACCCTAACGACTGGCCCCTCCCCAGCCCAAAGAAATAGTCAATCTTGCCCACCCTAGCCCTGGCCCACACCACAATGTTAATAATTATAACAAGCAGTAACCCATCTGTTATATCAGAGAAGGGAACAGAGACTCCACTGAGAGATTTAGAGTGAGATGTTAACATTTCTTCAGCTGACTGCACAAACAAACAAAC------------AAAAAAAGAGGAGAAATAATTCATTTGGAGATATGAAGTCATGAAATAGCTGATGTGTATTGCTTTTAACCATGCACTGATGCAAAACTGAAGCAACCattaataataaaaattaaaaaGGACATATGTATTTACACACAATCAGACCTGTTTGATCTGAAGCAGTTTGCAGATTCTATCTGTGTGTGATTTGAAATAAAACAAAAAATGGGGATTAGCATGGCCACAGCACACCCTAATGTAGGAGGGCACACACGGACGTCTTTTTGGAACTCTGATAGCTGGATAAATTTGGCTTGGCTAAGCTTGATTCAGATACACACATGCCCCTTTAAAAATAATTATTCTTATTATTTCGCAATTCATTCTGAATGACACCTG-GTATCCCCAGT-GGGGCTGTCCAATGCTCCATCGCTCCCCTATTCAACCTGCCTGACACTGGCAATATAATTCAGTCCTGACCCACAGCACTCACATGTATGCTTGTCCTCTGTCAACAACCGTATATTCTAGTCCACAGCATTCTTCTAAAATATTTCCTGTGTTTAGGAATTTTACTTTTTCACATATCTGTAACATATCTCTGACTTCAAGTTCCAGCTTCT--TCAAAGGAAAATGCCTTTGAAAAGTTGGCTTTAAGATCCTTT-C--CAGTG-TTTTCTGCAGTTGTTAAAGT--CTCAATTTTTCATGGCTCAATGTCATCTCCT-AGGGCTTTCCTAC-TCTGCTCTGAACCAATTTTATCACCTAATTAACTTTACGATGTTGCCACGTTGACCATATGA-TCTTTCGGCACAGTTTTGTAGCTGTGTTTTAATCTAGAGCAAAATACAATAG-----AATATAATC----CCTCC--TATATCTGACCTGTATCTGCA-TATTTATTAGTTTAATCTCACACTGGT--AGACT i rheMac3.chr10 I 75 C 0 s macFas5.chr10 80991142 1978 - 96509753 AAACAGAACAGGGTTG-CAAATATTTTACTGAAAAC--------------------------------------AAAAGGCCGGAGAAGAATATCAGCATTAAGAAATCAGCATTAAGAAAAAACACATTAATAG-TTTTTTTTTTTTTAAAGCAGATG---ACTTTAACATGATTATTCTCCTAATTACTTTATAATAACGGCATTACAGAGAAATCTTTAAAA---GAACAACTAT-TTTAGGATAA-ATAGGCAATATCCTACTAAACTAACTTGGTAATTCACTAAT----GGCTACT-CCAAAAGTAGAAAAATT-AATTGTGTGTCATGGATGTATTCctctc---tctctctctctctctctctctctcacacac--------------acacacacac--acGCTTACTCGAA-AGTATTTCTGCTGCT-----------TTATTCAACAAAACATATCATAAAATGTAAGACAAAGAAAATTCA--------GATATATTTATTTCTATTCCAGATTTCAAAGTGCATAGAAATTTCAGGCTGAGAAACCATTTTTTCA------ACTTTCACTCTTACTAGCAAATCTAAAGGCTTTTAT----AAAACATGAGAACAAAGTGCAGTTTGAAACACCAAGGTTTTCATTACTGTTTCTTAAGTTTTTCAAAAAGAACAAGGGTGGGAA-GGAGGAGGAAGAGACAGGGTTCAGGCGTG-----GGGAGGGATATGGCGCCACATT--TATTAATCACATTAAAAACTAAGCATGCCAACATCTGGAGCTAAAACAACCAGCAAAATCACCACGTTCAGACTCGTATTGGCTAACTCTATCTATCCCAGCATTCTCTTGGGACAGCGGTTTGCCCTAGGCTCTACCACAAGCTCGGTGAAGTACACAGCCTCAATTACTAGAGCGTGCAGCCACAACGACCTGGTATTACGGAAACAGTCAGTCACCACTTGAGTTAACATTCCATACCCTAACGACTGGCCCCTCCCCAGCCCAAAGAAATAGTCAATCTTGCCCACCCTAGCCCTGGCCCACACCACAATGTTAATAATTATAACAAGCAGTAACCCATCTGTTATATCAGAGAAGGGAACAGAGACTCCACTGAGAGATTTAGAGTGAGATGTTAACATTTCTTCAGCTGACTGCacaaacaaacaaac------------aaaaaaaGAGGAGAAATAATTCATTTGGAGATATGAAGTCATGAAATAGCTGATGTGTATTGCTTTTAACCATGCACTGATGCAAAACTGAAGCAACCATTAATAATAAAAATTAAAAAGGACATATGTATTTACACACAATCAGACCTGTTTGATCTGAAGCAGTTTGCAGATTCTATCTGTGTGTGATTTGAAATAAAACAAAAAATGGGGATTAGCATGGCCACAGCACACCCTAATGTAGGAGGGCACACACGGACGTCTTTTTGGAACTCTGATAGCTGGATAAATTTGGCTTGGCTAAGCTTGATTCAGATACACACATGCCCCTTTAAAAATAATTATTCTTATTCTTTCGCAATTCATTCTGAATGACACCTG-GTATCCCCAGT-GGGGCTGTCCAATGCTCCATCGCTCCCCTATTCAACCTGCCTGACACTGGCAATATAATTCAGTCCTGACCCGCAGCACTCACATGTATGCTTGTCCTCTGTCAACAACCGTATATTCTAGTCCACAGCATTCTTCTAAAATATTTCCTGTGTTTAGGAATTTTACTTTTTCACATATCTGTAACATATCTCTGACTTCAAGTTCCAGCTTCT--TCAAAGGAAAATGCCTTTGAAAAGTTGGCTTTAAGATCCTTT-C--CAGTG-TTTTCTGCAGTTGTTAAAGT--CTCAATTTTTCATGGCTCAATGTCATCTCCT-AGGGCTTTTCTAC-TCTGCTCTGAACCAATTTTATCACCTAATTAACTTTACGATGTTGCCACGTTGACCATATGA-TCTTTCGGCACAGTTTTGTAGCTGTGTTTTAATCTAGAGCAAAATACAATAG-----AATATAATC----CCTCC--TATATCTGACCTGTATCTGCA-TATTTATTAGTTTAATCTCACACTGGT--AGACT i macFas5.chr10 I 30 C 0 s papAnu2.chr10 76248237 1952 + 90941950 aaacagaacagggttg-caaatattttactGAAAAC--------------------------------------AAAAGGCTGGAGAAGAAT--------------ATCAGCATTAAGAAAAAACacattaatag-ttttttttttttaaaagcagatg---aCTTTAACATGATTATTCTCCTAATTACTTTATAATAACGGCATTACAGAGAAATCTTTAAAA---GAACAACTAT-TTTAGGATAA-ATAGGCAATATCCTACTAAACTAACTTGGTAATTCACTAAT----GGCTACt-ccaaaagtagaaaaatt-aattgTGTGTCATGGATGtattc---------------ctctctctttctctctcacacac--------------acacacacac--acgcttactCGAA-AGTATTTCTGCTGCT-----------TTATTCAACAAAACATATCATAAAATGTAAGACAAAGAAAATtca--------gatatatttatttctattccaGATTTCAAAGTGCATAGAAATTTCAGGCTGAGAAACCATTTTTTCA------ACTTTCACTCTTACTAGCAAATCTAAAGGCTTTTAT----AAAACATGAGAACAAAGTGCAGTTTGAAACACCAAGGTTTTCATTACTGTTTCTTAAGTTTTTCAAAAAGAACaagggtgggaa-ggaggaggaagagacaggGTTCAGGCGTG-----GGGAGGGATATGGCGCCACATT--TATTAATCACATTAAAAACTAAGCATGCCAACATCTGGAGCTAAAACAACCAGCAAAATCACCACGTTCAGACTCGTATTGGCTAACTCTATCTATCCCAGCATTCTCTTGGGACAGCGGTTTGCCCTAGGCTCTACCACAAGCTCGGTGAAGTACACAGCCTCAATTACTAGAGCGTGCAGCCACAACGACCTGGTATTACGGAAACAGTCAGTCACCACTTGAGTTAACATTCCATACCCTAACGActggcccctccccagcccaaaGAAATAGTCAATCTTGCCCACCCTAGCCCTGGCCCACACCACAATGTTAATAATTATAACAAGCAGTAACCCATCTGTTATATCAGAGAAGGGAACAGAGACTCCACTGAGAGATTTAGAGTGAGATGTTAACATTTCTTCAGCTGACtgcacaaacaaacaaac------------aaaaaaagaggagaaataattCATTTGGAGATATGAAGTCATGAAATAGCTGATGTGTATTGCTTTTAACCATGCACTGATGCAAAACTGAAGCAaccattaataataaaaattaaaaaggacatATGTATTTACACACAATCAGACCTGTTTGATCTGAAGCAGTTTGCAGATTCTATCTGTGTGtgatttgaaataaaacaaaaaatggggatTAGCATGGCCACAGCACACCCTAATGTAGGAGGGCACACACGGACGTCTTTTTGGAACTCTGATAGCTGGATAAATTTGGCTTGGCTAAGCTTGATTCAGATACACACATgcccctttaaaaataattattcttattcCTTCGCAATTCATTCTGAATGACACCTG-GTATCCCCAGT-GGGGCTGTCCAATGCTCCATCGCTCCCCTATTCAACCTGCCTGACACTGGCAATATAATTCAGTCCTGACCCACAGCACTCACATGTATGCTTGTCCTCTGTCAACAACCGTATATTCTAGTCCACAgcattcttctaaaatatttcctgTGTTTAGGAATTTTACTTTTTCACATATCTGTAACATATCTCTGACTTCAAGTTCCAGCTTCT--TCAAAGgaaaatgccttttaaaagttGGCTTTAAGATCCTTT-C--CAGTG-TTTTCTGCAGTTGTTAAAGT--CTCAATTTTTCATGGCTCAATGTCATCTCCT-AGGGCTTTTCTAC-TCTGCTCTGAACCAATTTTATCACCTAATTAACTTTACGATGTTGCCACGTTGACCATATGA-TCTTTCGGCACAGTTTTGTAGCTGTGTTTTAATCTATTGCAAAATACAATAG-----AATATAATC----CCTCC--TATATCTGACCTTTATCTGCA-TATTTATTAGTTTAATCTCACACTGGT--AGACT i papAnu2.chr10 I 32 C 0 s chlSab2.chr19 18517693 1998 + 33263144 AAACAGAACAGGGTTG-CAAATATTTTACTGAAAATATTTTTCAGTAAATATTTTACTGAAAATATTTTTCAGAAAAAGGCTGGAGAAGAAT--------------ATCAGCATTAAGAAAAAACACATTAATAG-TTTTTTTTTTTT-AAAGCAGATG---ACTTTAACATGATTATTCTCCTAATTACTTTATAATAACGGCATTACAGAGAAATCTTTAAAA---GAACAACTAT-TTTAGGATAA-ACAGGCAATATCCTACTAAACTAACTTGGTAATTCACTAAT----GGCTACT-CCAAAAGTAGAAA-----AATTGTGTGTCGTGGATATATTC---------------CTCTCTCTCTCTCTcacacacacacacacacatacagacacacacac--acGCTTACTCAAA-AGTATTTCTGCTGCT-----------TTATTCAACAAAACGTATCATAAAATGTAAGACAAAGAAAATTCA--------GATATATTTATTTCTATTCCAGATTTCAAAGTGCATAGAAATTTCAGGCTGAGAAACCATTTTTTCA------ACTTTCACTCTTACTAGCAATTCTAAAGGCTTTTAT----AAAACATGAGAACAAAGTGCAGTTTGAAACACCAAGGTTTTCATTACTGTTTCTTAAGTTTTTCAAAAAGAACAAGGGTGGGAA-GGAGGAGGAAGAGACAGGGTTCAGGCGTG-----GGGAGGGATATGGCGCCACATT--TATTAATCACATTAAAAACTAAGCATGCCAACATCTGGAGCTAAAACAACCAGCAAAATCACCACGTTCAGACTCGTATTGGCTAACTCTATCTATCCCAGCATTCTCTTGGGACAGCGGTTTGCCCTAGGCTCTACCACAAGCTCGGTGAAGTACACAGCCTCAATTACTAGAGCGTGCAGCCACAACGACCTGGTATTACGGAAACAGTCAGTCACCACTTGAGTTAACATTCCATACCCTAACGACTGGCCCCTCCCCAGCCCAAAGAAATAGTCAATCTTGCCCACCCTAACCCTGGCCCACACCACAATGTTAATAATTATAACAAGCAGTAACCCATCTGTTATATCAGAGAAGGGAACAGAGACTCCACTGAGAGATTTAGAGTGAGATGTTAACATTTCTTCAGCTGACTGCacaaacaaacaaac------------aaaaaaaGAGGAGAAATAATTCATTTGGAGATATGAAGTCATGAAATAGCTGATGTGTATTGCTTTTAACCATGCACTGATGCAAAACTGAAGCAACCATTAATAATAAAAATTAAAAAGGACATATGTATTTACACACAATCAGACCTGTTTGATCTGAAGCAGTTTGCAGATTCTATCTGTGTGTGATTTGAAATAAAACAAAAAATGGGGATTAGCATGGCCACAGCACACCCTAATGTAGGAGGGCACACACGGACGTCTTTTTGGAACTCTGATAGCTGGATAAATTTGGCTTGGCTAAGCTTGATTCAGATACACACATGCCCCTTTAAAAATAATTATTCTTATTCCTTCGCAATTCATTCTGAATGACACCTG-GTATCCCCAGT-GGGGCTGTCCAATGCTCCATCGCTCCCCTATTCAACCTGCCTGACACTGGCAATATAATTCAGTCCTGACCCACAGCACTCACATGTATGCTTGTCCTCTGTCAACAA-CGTATATTCTAGTCCACAGCATTCTTCTAAAATATTTCCTGTGTTTAGGAATTTTACTTTTTCACATATCTGTAACATATCTCTGACTTCAAGTTCCAGCTTCT--TCAAAGGAAAATGCCTTTGAAAAGTTGGCTTTAAGATCCTTT-C--CAGTG-TTTTCTGCAGTTGTTAAAGT--CTCAATTTTTCATGGCTCAATGTCATCTCCT-AGGGCTTTTCTAC-TCTGCTCTGAACCAATTTTATCACCTAATTAACTTTACGATGTTGCCACGTTGACCATATGA-TCTTTCAGCACAGTTTTGTAGCTGTGTTTTAATCTAGAGCAAAATACAATAG-----AATATAATC----CCTCC--TATAACTGACCTTTATCTGCA-TATTTATTAGTTTAATCTCACACTCGT--AGACT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198222640 1976 + 210400635 AAACAGAACAGCGTTG-CAAACATTTTATTGAAAAC--------------------------------------AAAGAGCTCGAGAAGAAT--------------ATCAGCATTAAGAAAAAACACATTAATAG-TTTTTTTT-----AAAGCAGACG---ACTTCAACATGATTATTCTCCTAATTACTTTATAATAATGGCATTACAGAGAAACCTTTAAAA---GGAGGACTAT-TTTAGGACAG-ACAGGCAATATCCTACTAAAC-AACTTGGTAATTCACTAAT----GACTACT-CCAAAAGTAGAATAATT-AATTGTGTATCATGGATGTATTCCCCCCctttctctctctctctctctctctctcacacacacacac--------acacacacgc--acTCTTACTTGAAGAATTCTTCTTCTGCT-------TTAGTTATTCAACAAAACATATTATAAAATGTAAGACAA--AAAATTCA--------GATATATTTATTTCTATTCTATATTTCAAAGTGCATAGAAATTTCAGGCTGAGAAACCGTTTTTTTG------ACTTTCACTCTTACTAGAAAATCTAAAGACTTTAAT----AAAACATGAGAACAAACTGCAGTTTGAAACACCAAGGTTTTCATTACTGTTTCTTAAGTTTTTCAAAAAGAACAAGGGTGGGAA-GGAGGTAGGAAAGACAGGGTTCAGGCGTG-----GGGAGGGATATGGCGCCACATT--TATTAATCACATTAAAAACTAAGCATGCCAACATCTGGAGCTAAAACAACCAGCAAAATCACCACGTTCAGACTCGTATTGGCTAACTCTATCTATCCCAGCATTCTCTTGGGACAGCGGTTTGCCCTAGGCTCTACCACAAGCTCGGTGAAGTACACAGCCTCAATTACTAGAGCGTGCAGCCACAACGACCTGGTATTACGGAAACAGTCAGTCACCACTTGAGTTAACATTCCATACCCTAACGACTGGCCCCTCCCCAGCCCAAAGAAATAGTAAATCTTGCCCACCCTAGCCCTGGCCCACACCACAATGTTAATAATTATAACAAGCAGTAACCCATCTGTTATATCAGAGAAGGGAACAGAGACTCCACTGAGAGATTTAGAGTGAGATGTTAACATTTCTTCAGCTGACTGCACAAACAAACAAAC------------AAAAAAAGAGGAGAAATAATTCATTTGGAGATATGAAGTCATGAAATAGCTGATGTGTATTGCTTTTAACCATGCACTGATGCAAAACTGAAGCAACCattaataataaaaattaaaaaGGACATATGTATTTACACACAATCAGACCTGTTTGATCTGAAGCAGTTTGCAGATTCTATCTGTGTGTGATTTGAAATAAAACAAAAAATGGGGATTAGCATGGCCACAGCACACCCTAATGTAGGAGGGCACACATGGACGGTTTTTTGGAACTCTGATAGCTGGATAAATTTGGCTTGGCTAAGCTTGATTCAAATACATACATGCCCCTTTAAAAAGAATTCTTCTTATTCCTTTGCAATTCATTCTGAATGACTCCTG-GAGTCCCCAGT-GGGGCCGCCCAATGCTCCATCACTCCCCTATTCAACCTGCCTGACACTGGCAATATAATACAGTTCTAATGCACAGCACTCACATGTATGCTCGCCCTCTGTCAACAGTCGTATATTCTAATCCATAGCATTCTTCTAAAATATTTCCTGTGTTTAGGAACTGTATTTTTTCGCCTATCTGTAATATGTCTCTGAGTTCCACTTCCAGTTTCT--TCAAAGGAAAATGCCTCTGAAAAGTTGACTTTAAGATCATTT-CCACAGTG-TTTTCTGCAGTTTTTAAAGT--CTCAGTTTTTCATGGCTCAATGTCATCTCCT-AGGAATTTTCTAC-TCTGCTCTGAACCAATCTTATTATTTAATTAACTTTATGATGTTGCCACGTTGACCACATGA-TCTTTTGGCACAGTTCTGTAGCTGTCTTTTAATCTAGAGCAAAACAGAATAG-----AATAGAATC----CCCCCCCCATATCTGACCTTTATCTGCA-TATTTATTAGCTTAATCTCACACTAGGTAAGACT i calJac3.chr1 C 0 C 0 s mm10.chr15 77088743 1756 + 104043685 --------------------ATATTTTATTGACACC--------------------------------------GATGAGCTTG-GGAGAAT--------------ACTGGCAACAAGGAGAACAACATTAATGC-TTTTGATC-------ATCAGACG---TCTTTTA----------------------------------------ACAGAAGTCATTTAAA---GGAGGGCTAC-TTGTGGGCGGTATGGGTAACACTTTATCAAGGCAACCCAGCACTTCACCCCC----GTCTTAT----------GGGAAGTG-CACTGTGCACCAGGAAGTGATCC---------------TTC----------------------------------TCACATACAT-----CTTACTCCAG-AGGCTTTCTGCTTTTGCTGACATTAGGTATTCCACAGACCCTTACATAAAACTCAGGAC----AAAATTTACAACAAACAATTGACTTAACTGCATTCTAGGTTTTACAGTGTACAAAGATTCCAGGCTAAGA-----TTTTCCCATTCCCCGATTTGACTTTAACGAGTAAATTTGAAGGCACTTATATACAGAACATGAGAGCAAAGTGCAGTTTGAAACACCAAGATTTTCATTACTGTTTCTTAAAATTTTCAAAAAGAACAA-GGTGGGAG-TAAGGAGAAG-----AGGGCTCAGGCGTGGGGGTGGGGTGGGGGTGGCGCCACATTAATATTAATCACATT-AAAACTGAGCATGCCGACATCCGGAGCTAAAACAA-CAGCAAAACCACCACGTCCAGACTGGCACTGGCTAACTCTATCTATCCCAGCATTCTCTTGGGACAGCGGTTTGCCCTAGGCTCTACCACAAGCTCGGTGAAGTACACAGCCTCAATTACTAGAGCGTGCAGCCACAACGACCTGGTATTACGGAAACAGTCAGTCACCACTTGAGTTAACATTCCATACCCTAACAACTGGTCCCTCCCCAGCCCAAAGGAGGAGTAAATCTTGCCCACCCGAGCCCTGGCCCATACCACAATGTTAATAATTATAACAAGCAGTAACCCATCTGTTATATCAGAGAAGGGAACAGAGACTCCACTGAGAGATTTAGAGTGAGATGTTAACATTTCTTCAGCTGACTGCACAAACAAACAAAC------------AAAAAAAGAGGAGAAATAATTCATTTGGAGATATGAAGTCATG-AATAGCTGATGTGTATTGCTTTTAACCATGCACTGATGCAAAACTGAAGCAACCAT---TAATAAAAATTAAAAAGGACATATGTATTTACACACAATCAGACCTGTTTGATCTGAAGCAGTTTGCAGATTCTATCTGTGTGTGATTTGAAATAAAACAAAAAATGGGGATTAGCATGGCCACAGCACACCAGAGTGTAGGAGGGCACACACAGACGGCTTCT-GGAACTC----AGCTGCTTAAGTCTGGCACGGCTAAGCCTGGCTCAAATCCACACATGCCCCTTGAAAAATGGTTAATTTT----CTTTGTAA-CCTTTCTAAGTAATGCCTG-ACACTCCCCGT-TTGGTGGCCCGAG----------CCCATTCTTCAACAGAGCTG-----------------------------------CTCAGACGT------GCTCTCTGGGAGCAACTGCAGACTCTAT----CTGTGCTCTTCCAA---GTCCCCTGTGTTTGAGAATCTCGTTCTCTCAGTTACTTGTCACA---CTCCTGCTCCCACTCCCAGCTTCTTCTCAAGGCTTAATGCTGCT---------GCTTTAGACCCCTTTAC--TAATGACTTTCCACAG-TGTTAAAGGAAAGCTGTTTCCCAT-ACCCAGTGCTACCTCTT-TGAGGTTTTCTACTTCTTCCCTAAATCAGGTTTATCGTGGGATTGACACTG------TACCAC-TGGGCC-------TCTTCTGTAGCATTTCTGCAGTTATGTTTGAAAC-AAAGCAGAA-------------GTTCTAACCATTGTCCCC--TACATGTGACCCTTGTCTGAA-CCCCTAAAGATT---------------------- i mm10.chr15 C 0 C 0 s canFam3.chr10 40846974 1898 - 69331447 AAACAGGACAGGGATA-CAAATGTTTCATTGCCTAT--------------------------------------TAAAGGTTTGAGAAGAGT--------------ATCAGCATTTAG---AACTACATTAATGT-GCTTTTCTTTTTAAAAGCTGTTAAATACCTCATCATGACTACTCTCCTAATTACCTTATAAT---GGTGCTACAGAGAGGCCCTATAAAGTGGGGGGGCTATCTTTAGGATGG-GCAGATAATATTCTCATAAACTACTTTGGTCATTCATTCATCAGGGACTACCCCCCAAATTAGAAAAGTTAAATTGTATCTTACGGATTTACCT---------------CTCT------------------------------------CAGAGGT--AGTCTTA-TCACA-AGCATTTCTGCTACT-----------GCTTTAAACAAAATATATCAGAAACTGTAAGACCAAGAAAATTCA--------GATGTATTTGTTTCTACT---GAGTTCGGAGTGCATCAAGCTTCCAGGTGGAGAAATTGTTTTCTCA------ACTTTCACCTCTACTAGCAAGTCTGAGGTCTTTTAT----AGAACATGAGAACAAAGTGCAGTTTGAAACACCAAGGTTTTCATTACTGTTTCTTAAGTTTTTCAAAAAGAACAAGGGTGGGGATGGGGGTTGGAGAGACAGGGTTCAGGCGTG-----GGG-GGGGTATGGCGCCACATT--TATTAATCACATTAAAAACTAAGCATGCCAACATCTGGAGCT-AAACAACCAGCAAAATCACCACGTTCAGACTCGTATTGGCTAACTCTATCTATCCCAGCATTCTCTTGGGACAGCGGTTGGCCCTAGGCTCTACCACAAGCTCGGTGAAGTACACAGCCTCAATTACTAGAGCGTGCAGCCACAACAACCTGCTATTACGGAAACAGTCAGTCACCACTTGAGTTAACATTCCAGACCCTAACGACTGG-CCCTCCCCAACCCAAAGAAATAGTCAAGGTCGCCCACCCTCGCCCTGGCCCACACCACAATGTTAATAATTATAACAAGCAGTAACCCATCTGTTATATCAGAGAAGGGAACAGAGACTCCACTGAGAGATTTAGAGTGAGATGTTAACATGTCTTCAGCTGACTGCACaaacaaacaaacaaaaaaaaaaaaaaaaaaaGAGGAGAAATAATTCATTTGGAGATATGAAGTCATGAAATAGCTGATGTGTATTGCTTTTAACCATGCACTGATGCAAAACTGAAGCAACCATTAAGAATAAAAATTAAAAAGGACATATGTATTTACACACAATCAGACCTGTTGGATCTGAAGCAGTTTGCAGATTCTATCTGTGTGTGATTTGAAATAAAACAAAAAATGGGGATTAGCATGGCCACAGCACACCCTAATGTAGGAGGGCACACACGGACTGTTTTTTGGAACCCTGATAGCTGGATACATTTGGCATGGCTGAGCCTGATCCAAAGATACACGTGCCCCTTTAAAAGGA----------TTCCTTTGTAATTCACTGTGAATGCCTCCAGAGCGTTCTCAACAGGGGCAGCCCAGCACTCCATCACTCTGCTACAC-ACTTTCCTAACCTTGATATCATGGTTCGGTCCTGACCCGCAGCACGAGCTTGAGTGCCAGCCCTCAGGCAGCACCCATCCATTCTGACC--CAGCGTTCTTCTAACATAGTGCCTGGGCTTAAGCGTTCTATCTTTCCACATATCCAGGACACATCCCTGCCTTCAACTTCCAGCTCTT--TCCCAGGAAAGTGCAGTT---------ACCTTAAGATCCTTT-T-----------------GTTGTTCAAGT--CTCAGCTCTCCAGGATCCACCAACACCTTCT-AGGGGTTCTCTAC------TCTGAACTGATTTTATCATTTAATTAACTTTG-AATGTTGCCACACTGACCACAGGACTTTTCTAAAACAGTTCTG---------TTTTAACCAGAACAAAATGGAAAGGCTCTATATGTCACC----TCTTC--TATATCTGACTTTTATCTGCATTATCTATTAGCTTGATCTCACAATGGA--CA--- i canFam3.chr10 C 0 C 0 a score=992317.000000 s hg38.chr22_KI270876v1_alt 72174 288 + 263666 TTTGCCTTGTCTTGATTTTAACCTAGCTTTTAATTTTATTATATTTTTGTTTTAGGTTTACATTAAAACAGGACTTTGGTGAGCATGTGATGTCAAGACACCTTCTTTCTACCCGGAAGACAATGACATTATGTGACACTGAGGAGGAGAGTGTGTATTTCAAGACCAGCAGACAAAATGAAAGCTTGTTACCTACATGTAGTGTATAGATCAATAGAGCAG----AGGGTTGGGGGATGGCGGCAG--GGGGTGGGTAAGGAATGGCAGGTGTGATGCTGAAAATCACTACAG s panTro4.chr22 34449695 289 + 49737984 TTTGCCTTGTCTTGATTTTAACCTAGCttttaattttattatatttttGTTTTAGGTTTACATTAAAACAGGACTTTGGTGAGCATGTGATGTCAAGACACCTTCTTTCTACCCGGAAGACAATGACATTATGTGACACTGAGGAGGAGAGTGTGTATTTCAAGACCAGCAGACAAAATGAAAGCTTGTTACCTACATGTAGTGTATAGGTCAATAGAGCAGG---AGGGTTGGGGGATGGCGGCAG--GGGGTGGGTAAGGAATGGCAGGTGCGATGGTTAAAATCACTACAG i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100418401 289 - 115148730 TTTGCCTTGTCTTGATTTTAACCTAGGCTTTAATTTTATTACATTTTTGTTTCAGGTTTACATTAAAACAGGACTTTGGTGAGCATGTGATGTCAAGACACCTTCTTTCTACCTGGAAGACAATGACATTATGTGACACTGAGGAGGAGAGTGTGTATTTCAAGACCAGCAGACAAAATGAAAGCTTGTTACCTACATGTACTGTATAGATCAATAGAGCAGG---AGGGTTGGGGGATGGCGGCAG--GGGGTGGGTAAGGAATGGCAGGTGTGATGCTTAAAATCACTACAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80566314 291 + 95678458 TTTGCCTTGTCTTGATTTTAACCTAGCCCTTAATTTTATTATATTTTTGTTTTAGGTTTACATTAAAACAGGACTTTGGTGAGCATGTGATGTCAAGACACCTTCTTTCTACCCGGAAGACAATGACATTATGTGACACTGAGGAGGAGAGTGTGTATTTCAAGACCAGCAGACAAAATGAAAGCTTGTTACCTACATGTAGTGTATAGATCAATAGAGCAGG---AGGGTTGGGAGATGGCAGCAGGTGGGGTGGGTAAGGAATGGCCGGTGTGATGCTTAAAATCACTACAG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80993120 291 - 96509753 TTTGCCTTGTCTTGATTTTAACCTAGCCCTTAATTTTATTATATTTTTGTTTTAGGTTTACATTAAAACAGGACTTTGGTGAGCATGTGATGTCAAGACACCTTCTTTCTACCCGGAAGACAATGACATTATGTGACACTGAGGAGGAGAGTGTGTATTTCAAGACCAGCAGACAAAATGAAAGCTTGTTACCTACATGTAGTGTATAGATCAATAGAGCAGG---AGGGTTGGGAGATGGCAGCAGGTGGGGTGGGTAAGGAATGGCCGGTGTGATGCTTAAAATCACTACAG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76250189 291 + 90941950 TTTGCCTTGTCTTGATTTTAACCTAGcccttaattttattatatttttgttttaggtttacATTAAAACAGGACTTTGGTGAGCATGTGATGTCAAGACACCTTCTTTCTACCCGGAAGACAATGACATTATGTGACACTGAGGAGGAGAGTGTGTATTTCAAGACCAGCAGACAAAATGAAAGCTTGTTACCTACATGTAGTGTATAGATCAATAGAGCAGG---AGGGTTGGGACATGGCAGCAGGTGGGGTGGGTAAGGAATGGCCGGTGTGATGCTTAAAATCACTACAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18519691 291 + 33263144 TTTGCCTTGTCTTGATTTTAACCTAGCCCTTAATTTTATTATATTTTTGTTTTAGGTTTACATTAAAACAGGACTTTGGTGAGCATGTGATGTCAAGACACCTTCTTTCTACCCGGAAGACAATGACATTATGTGACACCAAGGAGGAGAGTGTGTATTTCAAGACCAGCAGACAAAATGAAAGCTTGTTACCTACATGTAGTGTATAGATCAATAGAGCAGG---AGGGTTGGGAGATGGCAGTAGGTGAGGTGGGTAAGGAATGGCAGGTGTGATGCTTAAAATCACTAGAG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198224616 274 + 210400635 TTTGCTTTGTCTTGATTTTAACCTAGCCCTTAATTTT-----ATTTTTGTTTAAAGTTTACATTAAAACAGGACTTTGGTGAGCATGTGATGTCAAGACACCTTCTTTCTACCCAGAAGACAATGACATTATGTGACACTGAGGAGGAGAGTGTGTTTTTCAAGACCGGCAGACAAAATGAAAGCTTGTTACCTGCATGTAGTGTATAGATCAAGAGAGCAGG---AGGGTTGGGGGAT------------GGGGGGTAAGGAATGGCAGGTGTGATGCTTAAAATCACTACAG i calJac3.chr1 C 0 C 0 s mm10.chr15 77090499 284 + 104043685 CTCATCTTGTCTTGATTTTAACCTTGCCTTTAATTTTATTGTATTTTTGCTTTAGGTTTACATTAAAACAGGACTTTGGTGAGCATGTGATGTCAAGACACCTTCTTTCTACCTGAGAGACAATGAC---ATGTGACACTGAGGAGGAAAGTGTGTAGCTCAAGACCAGCAGAC-AAATGAAAGCTTGTTATCT-CATGTAGTGTGCAGATGGACAGAGCAAGGCAAGTGTGTGCATGTACAGGCAC-----GTGTGTAAGGGCTGGCAGGCGTGACGATTAACATCACCACCG i mm10.chr15 C 0 C 0 s canFam3.chr10 40848872 278 - 69331447 GTCCCCTTGTCTTGATTTTAACCTAGCCATTCattttattaaatttttgttttagatttatattaaaaCAGGACTTTGGTGAGCATGTGATGTCAAGACACCTTCTTTCTACCTGGAAGACAGTGGCTTTAGGGGATACTGAGGAGAAGAGTGTGTATTTCAGGACCAGCAGACAAAATGAGCATGTGTTCCTTGCATGTGGTATACAGATTTACAGAGCAAA---GGGAGTGGGGGGT-----------TGGTGGGT--GGAAAGGCAGGTGTGGTGCTTAAAAACACTACAG i canFam3.chr10 C 0 I 6 e ponAbe2.chr22 30866020 464 + 46535552 I a score=8279888.000000 s hg38.chr22_KI270876v1_alt 72462 2175 + 263666 CAGAGCAGAGATCTATTCCAACTAGCGTGG--GTTTAATGCTGGGCCTCCAGGAATCACTTTATTTATCCTTGGATGAATCTAACTCCCTCTTTTTCCTCACCACCTCCCCACCCCTGCTAAGAACCATGGTTCTA--------------GGAGAT-ATTATAGA-----GTTCTTTTGTGGCAAAATGGCATCACT-GATTAAATGT-------GAGT-AACACACAAACTTACAATAATGGTGATACCGTCACTGCTTTTGATTGAGCTCTGTCTCCTTTGAAAAGTACTTATGAAAAAAATTTTA----AAGTATTTAAATTTTATCTTATTATTGTTTAAAATTGGGGTTAAGGGAAAAAATTGCTATGATCAACCTGATGTCTTCCACCTATTATTTCTATGGTAGATGAGAGACGATTTTCAAT-AATCAAACCTTTCAAACA--TTATTATTCCACATCTCCCCAAATTAGTTCATTTCCAAAATCTTGCTGGGTAGCCACATAAATA----AACTGGATTGTGAAAAGCCATCGACTATTTTCTTTCTCCTAGCATCCAGCTATC-AGCAATCCTTCTAACAAGTATGCTATTATCCAAATGAACTCACTGATCTTCTT----AGGTGAAAGGAGAAGAGGCCAAGGGAAATGCATGTCTC--AATGTTTGAGTCCC-ATATGTCTAGATTTTTAAGGCAACTTCAAACTTATGTAGCAGCACAGTCCAATTACAACTGGTATCTCACTACAGGGCCCAATGTGGGATTCAGAAATCCTATTTGTACAG-TTCTACTTCCTCTTTTTTCTCTTTTCTAAATTTATAGTAGTAAGAAAATGTCCCCAACTGCTAAGATCT--AAATATAAAAAAACAGTTTAAATACCACAGGTACATGTGACTGACAGATTAAAAGAGGTGGCAGTGATG------GGACAGTGCATATTACACACCTGGCTGGGATATGTGTCAAGAGGACAGGAGCACTTAATTTTAGAGGAAGTGCCATTATGTACGGAATGTGACTGTGGGCACTGCTGAGGTAGCAGGGCTTAGATCACACGCTCACAAGTCTTGATTGTCCAAAAAAGCCTCTGTTCCCATCTCTAACGTGGAGCTGGAATGGTTAGTATAATTCAATTTTTTCACTGCAATCCACAATCTGATTGATTGGCAGGTCACACTGGCACTCCTACCTGAGGTATTTTAGCGCTAATGATTGGTTCCTGTAAGACTATTCTATAACAGAACACAGGAAGAGCAGTTCAAAAAACACAGCTGTGGAAGGAAAACAATCATACAAAAAGCCCACTAAGGGGCCCACCAGCCTTTTCTTTCCTTTGGATGCAAGCATGCTTTTCACAGGAGGTGATTTAGGAGCAGTTTGTTAACCCATTTAAAAAGTGAATTAGGGCGAACTATGCCTTTTCTACTGGCCAAAAAAGAAGAGGGAGGGCTGGATACATAATCTAGCTGCCACACTCCCAAATCCTATCACGGTAGGTCTTTTTACAAACTAGGAACAGAATTGCTAGATCAG--------TTCTCCAGAGAGGAATGTGCCATAAAAGAAACAGAAAGT----AAA-------------TGGCTAGCAGGAATCACTGTCTAAGAATGGGACTGTGAAAGGGATTACAAAAACCTTGCACAATTAATAGCCTAAATTCATTTAACTT-AAGCATAACCAGCAATTTAAAATCTTTTCCCTTGTGTCTTCTCTTCAAGCTCCGATT----CGGTGCACTTTT--CATAC----TAAACTCTCTATTCCTTCTATTTCTAATATGCC-TTTCGGAGGAAATAAGAACTAAATGTATGCTGACAGATTTCCACAGAT-GGG-AAATGTATGGAGAGAAGCAGAACAAACTC-AAGGCAAAAA---------TGATAG-TTTTT-TGTTGTCTGTGTGTTTTTGAAGAAGT----------ATCCTTTGCTCCCTCACATGTGGAATACAGAACACACAGTTTTAAAAGCAACAGTTGTATTAGGCCTAACTCAGTAGTTACCTCA-----TAAAGTATTCTTGCTTTTCATGTAGGGGCATGGATATTATTTCAGCACTAGTGACCAACCTTTTTTTCTCTAAGTAACTCTGCTTTA-----AGATAAGAACTAAGAA---ATA-ATAACATTACTATTAATTACTTTCATTAACAAGGGGCCACTGGTCAAAAAAAATTATTTCAGCAAG-ATCACTGAATTACTTGTGTTTAGCTCAGCAAGGTAATCCAGTTAGTAGATT--AAAAAAAAAAA------ s panTro4.chr22 34449984 2176 + 49737984 CAGAGCAGAGATCTATTCCAACTAGCGTGG--GTTTAACGCTGGGCCTCCAGGAATCACTTTATTTATCCTTGGATGAATCTAACTCCCTCTTTTTCCTCACCACCTCCCCACCCCTGCTAAGAACCATGGTTCTA--------------GGAGATTATTATAGA-----GTTCTTTTGTGGCAAAATGGCATCACT-GATTAAATGT-------GAGT-AACACACAAACTTACAATAATGGTGATACTGTCACTGCTTTTGATTGAGGTCTGTCTCCTTTGAAAAGTACTTATGAAAAAGATTCCA----AAGTATTTAAATTTTATCTTATTATTGTTTAAAATTGGGGTTAAGGGAAAAAATTGCTATGATCAACCTGATGTCTTCCACCTATTATTTCTATGGTAGATGACAGACGATTTTCAAT-AATCAAACCTTTCAAACA--TTATTATTCCACATCTCCCCAAATTAGTTCATTTCCAAAATCTTGCTGGGTAGCCACATAAATA----AACTGGATTGTGAAAAGCCATCGACTATTTTCTTTCTCCTAGCATCCAGCTATC-AGCAATCCTTCTAACAAGTATGCTATTATCCAAATGAACTCACTGATCTTCTT----AGGTGAAAGGAGAAGAGGCCAAGGGAAATGCATGTCTC--AATGTTTGAGTCCC-ATATGTCTAGATTTTTAAGGCAACTTCAAACCTATGTAGCAGCACAGTCCAATTACGACTGGTATCTCACTACAGGGCCCAATGTGGGATTCAGAAATCCTATTTGTACAG-TTCTACTTCCTCTTTTTTCTCTTTTCTAAATTTATAGTAGTAAGAAAATGTCCCCAACTGCTAAGATCT--AAATATAAAAAAACAGTTTAAATACCACAGGTACATGTGACTGACAGATTAAAAGAGGTGGCAGTGATG------GGACAGTGCATATTACACACCTGGCTGGGATATGTGTCAAGAGGACAGGAGCACTTAATTTTAGAGGAAGTGCCATTATGTACGGAATGTGACTGTGGGCACTGCTGAGGTAGCAGGGCTTAGATCACACGCTCACAAGTCTTGATTGTCCAAAAAAGCCTCTGTTCCCATCTCTAACGTGGAGCTGGAATGGTTAGTATAATTCAATTTTTTCACTGCAATCCACAATCTGATTGATTGGCAGGTCACACTGGCACTCCTACCTGAGGTATTTTAGCGCTAATGATTGGTTCCTGTAAGACTATTCTATAACAGAACACAGGAAGAGCAGTTCAAAAAACACAGCTGTGGAAGGAAAACAATCATACAAAAAGCCCACTAAGGGGCCCACCAGCCTTTTCTTTCCTTTGGATGCAAGCATGCTTTTCACAGGAGGTGATTTAGGAGCAGTTTGTTATCCCATTTAAAAAGTGAATTAGGGCGAACTATGCCTTTTCTACTGGCCAAAAAAGGAGGAGGAGGGCTGGATACATAATCTAGCTGCCACACTCCCAAATCCTATCACGGTAGGTCTTTTTACAAACTAGGAACAGAATTGCTAGATCAG--------TTCTCCAGAGAGGAATGTGCCATAAAAGAAACAGAAAGT----AAA-------------TGGCTAGCAGGAATCACTGTCTAAGAATGGGACTGTGAAAGGGATTACAAAAACCTTGCACAATTAATAGCCTAAATTCATTTAACTT-AAGCGTAACCAGCAATTTAAAATCTTTTCCCTTGTGTCTTCTCTTCGAGCTCCGATT----CGGTGCACTTTT--CATAC----TAAACTCTCTATTCCTTCTATTTCTAATATGCC-TTTCGGAGGAAATAAGAACTAAATGTATGCTGACAGATTTCCACAGAT-GGG-AAATGTATGGAGAGAAGCAGAACAAACTC-AAGGC-AAAA---------TGATAG-TTTTT-TGTTGTCTGTGTGTTTTTGAAGAAGT----------ATCCTTTGCTCCCTCACATGTGGAATACAGAACACACAGTTTTAAAAGCAACAGTTGTATTAGGCCTAACTCAGTAGTTACCTCA-----TAAAGTATTCTTGCTTTTCATGTAGGGGCATGGATATTATTTCAGCACTAGTGACCAACCTTTTTTTCTCTAAGTAACTCTGCTTTA-----AGATAAGAACTAAGAA---ATA-ATAACATTACTATTAATTACTTTCATTAACAAGGGGCCACTGGTCAAAAAAAATTATTTCAGCAAG-ATCACTGAATTACTTGTGTTTAGCTCAGCAAGGTAATCCAGTTAGTAGATT-AAAAAAAAAAAA------ i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30866484 2167 + 46535552 CAGAGCAGAGAT-TATTCCAACTAGCGT-G--GTTTAATGCTGGACCTCCAGGAATCACTTTATTTATCCTTGGATGAATCTAACTCCCTCTTTTTCCTCACCACCTCCCCACTCCTGCTAAGAACCATGGTTCTA--------------GGAGAT-ATTATAGA-----GTTCTTTTGTGGCAAAATGGCATCACT-GATTAAATGT-------GAGT-AACACACAAACTTACAATAATGGTGATACTGTCACTGCTTTTGATTGAGGCCTATCTCCTTTGAAAAGTACTTATGaaaaaaatttta----aagtatttaaattttatcttattattatttaaaattGGGGTTAAGGGAAAAAATTGCTATGATCAACTTGATGTCTTCCACCTATTATTTCTATGATAGATGAGAGACGATTTTCAATAAATCAAACCTTTCAAACA--TTATTATTCCATATCTCCCCAAATTAGTTCATTTCCAAAATCTTGCTGGGTAGCCACATAAATA----AACTGGATTGTGAAAAGCCATCGACTATTTTCTTTCTCCTAGCATCCAGCTATC-AGCAATCCTTCTAACAAGTATGCTATTATCCAAATGAACTCACTGATCTTCTT----AGGTGAA---AGAAGAGGCCAAGGGAAATGCATGTCTC--AGTGTTTGAGTCCC-ATATGTCTAGATTTTTAAGGCAACTTCAAACTTATGTAGCAGCACAGTCCAATTACGACTGGTATTTCACTACAGGGCCCAATGTGGGATTCAGGAATCCTATTTGTACAG-TTCTACTTCCTCTTTTTTCTCTTTTCTAAATTTATAGTAGTAAGAAAATGTCCCCAACTGCTAAGATCT--AAATAGAAAAAAACAGTTTAAATACCACAGGTAAATGTGACTGACAGATTAAAAGAGGTGGCAGTGATG------GGACAGTGCATATTACACACCTGGCTGGGATATGTGTCAAGAGGACAGGAGCACTTAATTTTGGAGGAAGTGCCATTATGTACGGAATGTGACTGTGGGCACTGCTGAGGTAGCAGGGCTTAGATCACACGCTCACAAGTCTTGATTGTCCAAAAAAGCCTCTGTTCCCATCTCTAACGTGGAGCTGGAATGGTTAGTATAATTCAATTTTTTCACTGCAATCCACAATCTGATTGATTGGCAGGTCACACTGGCACTCCTACCTGAGGTATTTTAGCGCTAATGATTGGTTCCTGTAAGACTATTCTATAACAGAACACAGGAAGAGCAGTTCAAAAAACACAGCTGTGGAAGGAAAACAATCATACAAAAAGCCCGCTAAGGGGCCCACCAGCCTTTTCTTTCCTTTGGATGCAAGCATGCTTTTCACAGGAGGTGATTTAGGAGCAGTTTGTTATCCCATTTAAAAAGTGAATTAGGGCGAACTATGCCTTTTCTACTGGCCAAAAAGGAAGAGGGAGGGGTGGATACATAATCTAGCTGCCACACTCCCAAATCCTATCACGGTAGGTCTCTTTACAAACTAGGAACACAATTGCTAGATCAG--------TTCTCCAGAGAGGAATGTGCCATAAAAGAAACAGAAAGA----AAA-------------TGGCTAGCAGGAATCACTGTCTAAGAATGGGACTGTGAAAGGGATTACAAAAACCTTGCACAATTAATAGCCTAAATTCATTTAACTT-AAGCATAACCAGCAATTTAAAATCTTTTCCCCCGTGTCTTCTCTTCAAGCTCCTATT----CGGTGCACTTTT--TATAC----TAAACTCTCTATTCCTTGTATTTCTAATATGCC-TTTCGGAGGAAATAAGAACTAAATGTATGCTGACAGATTTCCACAGAT-GAG-AAATGTATGGAGAGAAGCAGAACAAACTC-AAGGC-AAAA---------TGATAG-TTTTT-TGTTGTCTGTGTGTTTTTGAAGAAGT----------ATCCTTTGCTCCCTCACATGTGGAATACAGAATACACAGTTCTAAAAGCAACAGTTGTATTAGGCCTAACTCAGTAGTTACCTCA-----TAAAGTATTCTTGCTTTTCATGTGGGGGCATGGATATTATTTCAGCACTAGTGACCAA-CTTTTTTTCTCTGAGTAACTCTGCTTTA-----ACATAAGAACTAAGGA---ATA-ATAACATTACTATTAATTACTTTCATTAACAAGGGGCCACTGGTCAAAAAAAATTATTTCAGCAAG-ATCACTGAATTACTTGTGTTTAGCTCAGTAAGGTAATCCAGTTAGTAGATT--AAAAAAAAA-------- i ponAbe2.chr22 I 464 C 0 s nomLeu3.chr7b 100418690 2166 - 115148730 CAGAGCAGAGATCTATTCCAACTAGCGTGG--GTTTAATGCTGGGCCTCCAGGAATCACTTTATTTATCCTTGGATGAATCTAATTCCCTCTTTTTCCTCACCACCTCCCCACCCCTGCTAAGAACCATGGTTCTA--------------GGAGAT-ATTATAGA-----GTTCTTTTGTGGCAAAATGGCATCACT-GATTAAATGT-------GAGT-AACACACAAACTTACAATAATGGTGATACTGTCACTGCTTTTGATTGAGGTCTATCTCCTTTGAAAAGTACTTATGAAAAAAatttta----aagtatttaaattttatcttattattatttAAAATTGAGATTAAGAGAAAAAATTGCTATGATCAACTTGATGTCTTCCACCTATTATTTCTATGGTAGATGAGAGACGATTTTCAATAAATCAAACCCTTCAAACA--TTATTATTCCACATCTCCCCAAATTAGTTCATTTCCAAAATCTTGCTGGGTAGCCACATAAATA----AACTGGATTGTGAAAAGCCATCAACTATTTTCTTTCTCCTAGCATCCAGCTATC-AGCAATCCTTCTAACAAGTATGCTATTATCCAAATGAACTCACTGATCTTCTT----AGGTGAAAGGAGAAGGGGCCAAGGGAAATGCATGTCTC--AATGTTTGAGTTCC-GTATGTCTAGATTTTTAAGGCAACTTCAAACTTATGTAGCAACACAGTCCAATTACGACTGGTATTTCACTACAGGGCCCAATGTGGGATTCAGGAATCCTATTTGTACAG-TTCTACTTCCTCTTTTTTCTCTTTTCTAAATTTATAGTAGTAAGAAAATGTCCCCAACTGCTAAGATCT--AAATATAAAAAAACAGTTTAAATACCACAGGTAAATGTGACTGACAGATTAAAAGAGGTGGCAGTGATG------GGACAGTGCATATTACACACCTGGCTGGGATATGTGTCAAGAGGACAGGAGCACTTAATTTTGGAGGAAGTGCCATTATGTACGGAATGTGACTGTGGGCACTGCTGAGGTAGCAGGGCTTAGATCACACGCTCACAAGTCTTGATTGTCCAAAAAAGCCTCTGTTCCCATCTCTAACGTGGAGCTGGAATGGTTAGTATAATTCAATTTTTTCACTGCAATCCACAATCTGATTGATTGGCAGGTCACACTGGCACTCCTACCTGAGGTATTTTAGCGCTAATGATTGGTTCCTGTAAGACTATTCTATAACAGAACACAGGAAGAGCAGTTCAAAAAACACAGCTGTGGAAGGAAAACAATCATACAAAAAGCCCGC-AAGGGGCCCACCAGCCTTTTCTTTCCTTTGGATGCAAGCATGCTTTTCACAGGAGGTGATTTAGGAGCAGTTTGTTATCCCATTTAAAAAGCGAATTAGGGCGAACTATGCCTTTTCTACTGGCCAAAAAAGAAGAGGGAGGGGTGGATACATAATCTAGCTGCCACACTCCCAAATCCTATCACGGTAGGTCTCTTTACAAACTAGGAACACAATTGCTAGATCAG--------TTCTCCAGAGAGGAATGTGCCATAAAAGAAACAGAAAGA----AAA-------------TGGCTAGCAGGAATCACTGTCTAAGAATGGGACTGTGAAAGGGATTACGAAAACCTTGCACAA-TAATAGCCTAAATTCATTTAACTT-AAGCATAACCAGCAATTTAAAATCTTTTCCCTCGTGTCTTCTCTTCAAGCTCTGATT----CGGTGCACTTTT--TATAC----TAAACTCTCTAGTCCTTCTATTTCTAATATGCC-TTTCGGATGAAATAAGAACTAAATGTATACTGACAGATTTCCACAGAT-GGG-AAATGTATGGAGAGAAGCAGAACAAACTC-AAGGC-AAAA---------TGATAG-TTTTT-TGTTGTC----TGTTTCTGAAGAAGT----------ATCCTTTGCTCCCTCACATGTGGAATACAGAATACACAGTTTTAAAAGCAACAGTTGTATTAGGCCTAACTCAGTAGTTACCTCA-----TAAAGTATTCTTGCTTTTCGTGTGGGGGCATGGATATTATTTCAGCACTAGTGACCAA-TTTTTTTTCTCTAAGTAACTCTGCTTTA-----AGATAAGAACTAAGAA---ATA-ATAACATTACTATTAATTACTTTCATTAACAAGGGGCCACTGGTCAAAAAAAATTATTTCAGCAAG-ATCACTGAATTACTTGTGTTTAGCTCAGCAAGGTAATCCAGTTAGTAGATT--AAAAAAAAA-------- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80566605 2162 + 95678458 CAGAGCAGAGATGTATTCCAGCTAGTGTGG--GTTTAATGCTGGGCCTCCAGGAATCACTTTACTTATCCTTGGATGATTCTGACTCCCTCTTTTTCCTCCCCACCTCCCCACCCCTGCTAAGAACCATGGTTCTA--------------GGAGAT-ATTATAGA-----GTTCTTTGGTGGCAAAATGGCATCACT-GATTAAATGT-------GAGT-AACACAGAAACTTACAATAATGGTGATACTGTCACTGCTTTTGATTGAGGTCTATCTCCTTTGAAAAGTACTTATGaaaaaaatttta----aagtatttaaattttatcttattattatttaaCATTGGGGTTAAGGGGAAAAATTGCTATGATCAACTTGATGTCTTCCACCTATTATTTCTATGGTAGATGAGAGATGATTTTCAATAAATCAAACCTTTCAAACA--TTATTATTCCACATCTCCCCAAATTAGTTCATTTCCAAAATCTTGCTGGGTAGCCACATAAATA----AACTGGATTGTGAAAAGCCATCGACTATTTTCTTTCTCCTAGCATCCAGCTATC-AGCAATCCTTCTAACAAGTATGCTATTATAAAAATGAACTCACTGATCTTCTC----GGGTGAAAGGAGAAGAGGCCAAGGGAAATGCATGTCTC--ATTGTTTGAGTCCC-GTATGTCTAGATTTTTAAGGCAACTTCAAACTTATATAGCAGCACAGTCCAACTACTACTGATATTTCACTACAGGGCCCAAGGTGGGATTCAGGAATCCTATTTGTACAG-TTCTACTTCCTCTTTTTTCTCTTTTCTAAATTTATAGTAGTAAGAAAATGTCCCTAACTGCTAAGATCT--AAATATAAAAAAACAGTTTAAATACCACAGGTAAATGTGACTGACAGATTAAAAGAGGTGGCAGTGATG------GGACAGTGCATATTACACAACTGGCTGGGATATGTGTCAAGAGGACAGGAGCAC----TTTTGGAGGAAGTGCCATTATGTACGGAATGTGACTGTGGGCACTGCTGAGGTAGCAGGGCTTAGATCACACGCTCACAAGTCTTGATTGTCCAAAAAAGCCTCTGTTCCCATCTCTAACGTGGAGCTGGAATGGTTAGTATAATTCAATTTTTTCACTGCAATCCACAATCTGATTGATTGGCAGGTCACACTGGCACTCCTACCTGAGGTATTTTAGCGCTAATGATTGGTTCCTGTAAGACTATTCTATAACAGAACACAGGAAGAGCAGTTCAAAAAACACAGCTGTGGAAGGAAAACAATCATACAAAAAGCCCGCTAAGGGGCCCACCAGCCTTTTCTTTCCTTTGGATGCAAGCATGCTTTTCACAGGAGGTGAATTAGGAGCAGTTTGTTATCCCATTTAAAAAGTGAATCAGGGCGAACTATGCCTTTTCTACTGGCCAAAAAAGAAGAGGGAGGGGTGGATACATAATCTAGCTGCCACACTCCCAAATCCTATCACGGTGGGTCTCTTTACAAACTAGGAACACAATTGCTAGATCAG--------TTCTCCAGAGAGGAATGTGCCAT-AAAGAAACAGAAAGA----AAA-------------TGGCTAGCAGGAATCACTGTCTACGAATGGGACAGTGAAAGGGATTACAAAAACTTTGCACAATTAATAGCCTAAATTCACTTAAC-T-AAGCATAACCAGCAATTTAAAATCTTTTCCCTCGTGTCTTCTCTTCAAGCTCCAATT----CGGTGCACTTTT--TATAC----TAAACTCTCTATTCCTTCTATTTCTAAGATGCC-TTTCGGAGGAAATAAGAACTAAATGTATACTGACAGATTTCCACAGAT-GAG-AAATGTACGGAGAGAAGTAGCACAAACTCAAAGGC-ACAA---------TGACAG-CTTTT-TGTTGTC--TGTGTTTCTGAAGAAGT----------ATTCTTTGCTCCCTCACATGTGGAATATAGAATACGCAGTTTTAAAAGTGACAGTTGTATTAGGCCTAACTCAGTAGTTACCTCA----------TATTCTTGCTTCTCATGTGTGGGCGTGGATGTTATTTCAGCACTAGTGACCAA-CTTTTTTTCTCTAAGTAACTCTGCTTTA-----AGGTAAGAACTAAAAA---ATA-ATAACATTACTATTAATTACTTTCATTAACAAGGGGCCACTGGTCAAAAAAAATTATTTCAGCAAA-ATCACGGAATTACTTGTGTTTAGCTCAGCAAGGTAATCCAGTTAGTAGATTTAAAAAAAAAA-------- i rheMac3.chr10 C 0 I 11 s macFas5.chr10 80993411 2163 - 96509753 CAGAGCAGAGATGTATTCCAGCTAGCGTGG--GTTTAATGCTGGGCCTCCAGGAATCACTTTACTTATCCTTGGAAGATTCTGACTCCCTCTTTTTCCTCCCCACCTCCCCACCCCTGCTAAGAACCATGGCTCTA--------------GGAGAT-ATTATAGA-----GTTCTTTGGTGGCAACATGGCATCACT-GATTAAATGT-------GAGT-AACACAGAAACTTACAATAATGGTGATACTGTCACTGCTTTTGATTGAGGTCTATCTCCTTTGAAAAGTACTTATGAAAAAAATTTTA----AAGTATTTAAATTTTATCTTATTATTATTTAACATTGGGGTTAAGGGGAAAAATTGCTATGATCAACTTGATGTCTTCCACCTATTATTTCTATGGTAGATGAGAGATGATTTTCAATAAATCAAACCTTTTAAACA--TTATTATTCCACATCTCCCCAAATTAGTTCATTTCCAAAATCTTGCTGGGTAGCCACATAAATA----AACTGGATTGTGAAAAGCCATCGACTATTTTCTTTCTCCTAGCATCCAGCTATC-AGCAATCCTTCTAACAAGTATGCTATTATAAAAATGAACTCACTGATCTTCTC----GGGTGAAAGGAGAAGAGGCCAAGGGAAATGCATGTCTC--ATTGTTTGAGTCCC-GTATGTCTAGATTTTTAAGGCAACTTCAAACTTATATAGCAGCACAGTCCAACTACTACTGATATTTCACTACAGGGCCCAAGGTGGGATTCAGGAATCCTATTTGTACAG-TTCTACTTCCTCTTTTTTCTCTTTTCTAAATTTATAGTAGTAAGAAAATGTCCCTAACTGCTAAGATCT--AAATATAAAAAAACAGTTTAAATACCACAGGTAAATGTGACTGACAGATTAAAAGAGGTGGCAGTGATG------GGACAGTGCATATTACACAACTGGCTGGGATATGTGTCAAGAGGACAGGAGCAC----TTTTGGAGGAAGTGCCATTATGTACGGAATGTGACTGTGGGCACTGCTGAGGTAGCAGGGCTTAGATCACACGCTCACAAGTCTTGATTGTCCAAAAAAGCCTCTGTTCCCATCTCTAACGTGGAGCTGGAATGGTTAGTATAATTCAATTTTTTCACTGCAATCCACAATCTGATTGATTGGCAGGTCACACTGGCACTCCTACCTGAGGTATTTTAGCGCTAATGATTGGTTCCTGTAAGACTATTCTATAACAGAACACAGGAAGAGCAGTTCAAAAAACACAGCTGTGGAAGGAAAACAATCATACAAAAAGCCCGCTAAGGGGCCCACCAGCCTTTTCTTTCCTTTGGATGCAAGCATGCTTTTCACAGGAGGTGAATTAGGAGCAGTTTGTTATCCCATTTAAAAAGTGAATCAGGGCGAACTATGCCTTTTCTACTGGCCAAAAAAGAAGAGGGAGGGGTGGATACATAATCTAGCTGCCACACTCCCAAATCCTATCACGGTGGGTCTCTTTACAAACTAGGAACACAATTGCTAGATCAG--------TTCTCCAGAGAGGAATGTGCCATAAAAGAAACAGAAAGA----AAA-------------TGGCTAGCAGGAATCACTGTCTACGAATGGGACAGTGAAAGGGATTACAAAAACTTTGCACAATTAATAGCCTAAATTCACTTAAC-T-AAGCATAACCAGCAATTTAAAATCTTTTCCCTCGTGTCTTCTCTTCAAGCTCCAATT----CGGTGCACTTTT--TATAC----TAAACTCTCTATTCCTTCTATTTCTAAGATGCC-TTTCGGAGGAAATAAGAACTAAATGTATACTGACAGATTTCCACAGAT-GAG-AAATGTACGGAGAGAAGTAGCACAAACTCAAAGGC-ACAA---------TGACAG-CTTTT-TGTTGTC--TGTGTTTCTGAAGAAGT----------ATTCTTTGCTCCCTCACATGTGGAATATAGAATACGCAGTTTTAAAAGTGACAGTTGTATTAGGCCTAACTCAGTAGTTACCTCA----------TATTCTTGCTTCTCATGTGTGGGCGTGGATGTTATTTCAGCACTAGTGACCAA-CTTTTTTTCTCTAAGTAACTCTGCTTTA-----AGGTAAGAACTAAAAA---ATA-ATAACATTACTATTAATTACTTTCATTAACAAGGGGCCACTGGTCAAAAAAAATTATTTCAGCAAA-ATCACGGAATTACTTGTGTTTAGCTCAGCAAGGTAATCCAGTTAGTAGATTTAAAAAAAAAA-------- i macFas5.chr10 C 0 I 11 s papAnu2.chr10 76250480 2165 + 90941950 CAGAGCAGAGATGTATTCCAACTAGCGTGG--GTTTAATGCTGGGCCTCCAGGAATCACTTTACTTATCCTTGGATGATTCTAACTCCCTCTTTTTCCtcaccacctccccacccctgctAAGAACCATGGTTCTA--------------GGAGAT-ATTATAGA-----GTTCTTTGGTGGCAAAATGGCATCACT-GATTAAATGT-------GAGT-AACAcagaaacttacaataatggtgaTACTGTCACTGCTTTTGATTGAGGTCTATCTCCTTTGAAAAGtacttatgaaaaaaatttta----aagtatttaaattttatcttattattatttaacattggggttaaggggaaaaaTTGCTATGATCAACTTGATGTCTTCCACCTATTATTTCTATGGTAGATGAGAGATGATTTTCAATAAATCAAACCTTTCAAACA--TTATTATTCCACATCTCCCCAAATTAGTTCATTTCCAAAATCTTGCTGGGTAGCCACATAAATA----AACTGGATTGTGAAAAGCCATCgactattttctttctcctagCATCCAGCTATC-AGCAATCCTTCTAACAAGTATGCtattataaaaatgaactcaCTGATCTTCTC----GGGTGAAAGGAGAAGAGGCCAAGGGAAATGCATGTCTC--ATTGCTTGAGTCCC-GTATGTCTAGATTTTTAAGGCAACTTCAAACTTACATAGCAGCACAGTCCAACTACTACTGATATTTCACTACAGGGCCCAAGGTGGGATTCAGGAATCCTATTTGTACAG-TTctacttcctcttttttctcttttctaaatttatagTAGTAAGAAAATGTCCTTAACTGCtaagatct--aaatataaaaaaacagtttaaataCCACAGGTAAATGTGACTGACAGATTAAAAGAGGTGGCAGTGATG------GGACAGTGCATATTACACAACTGGCTGGGATATGTGTCAAGAGGACAGGAGCAC----TTTTGGAGGAAGTGCCATTATGTACAGAATGTGACTGTGGGCACTGCTGAGGTAGCAGGGCTTAGATCACACGCTCACAAGTCTTGATTGTCCAAAAAAGCCTCTGTTCCCATCTCTAACGTGGAGCTGGAATGGTTAGTATAATTCAATTTTTTCACTGCAATCCACAATCTGATTGATTGGCAGGTCACACTGGCACTCCTACCTGAGGTATTTTAGCGCTAATGATTGGTTCCTGTAAGACTATTCTATAACAGAACACAGGAAGAGCAGTTCAAAAAACACAGCTGTGGAAGGAAAACAATCATACAAAAAGCCCGCTAAGGGGCCCACcagccttttctttcctttggatgcAAGCATGCTTTTCACAGGAGGTGAATTAGGAGCAGTTTGTTATcccatttaaaaagtgaatcaGGGCGAACTATGCCTTTTCTACTGGCcaaaaaagaagagggaggggTGGATACATAATCTAGCTGCCACACTCCCAAATCCTATCACGGTGGGTCTCTTTACAAACTAGGAACACAACTGCTAGATCAG--------TTCTCCAGAGAGGAATGTGccataaaagaaacagaaaga----aaa-------------tggctAGCAGGAATCACTGTCTACGAATGGGACAGTGAAAGGGATTACAAAAACTTTGCACAATTAATAGCCTAAATTCACTTAAC-T-AAGCATAACCAGCAATTTAAAATCTTTTCCCTCGTGTCTTCTCTTCAAGCTCCAATT----CGGTGCACTTTT--TATAC----TAAACTCTCTATTCCTTCTATTTCTAAGATGCC-TTTCGGAGGAAATAAGAACTAAATATATACTGACAGATTTCCATAGAT-GAG-AAATGTACGGAGAGAAGCAGCACAAACTCAAAGGC-ACAA---------TGACAG-CTTTT-TGTTGTCTGTGTGTTTCTGAAGAAGT----------ATTCTTTGCTCCCTCACATGTGGAATATAGAATACGCAGTTTTAAAAGTGACAGTTGTATTAGGCCTAACTCAGTAGTTACCTCA----------TATTCTTGCTTCTCATGTGTGGGCGTGGATGTTATTTCAGCACTAGTGACCAA-CtttttttCTCTAAGTAACTCTGCTTTA-----AGGtaagaactaaaaa---ata-ataacattactaTCAATTACTTTCATTAACAAGGGGCCACCggtcaaaaaaaattatttcagcaaa-atCACGGAATTACTTGTGTTTAGCTCAGCAAGGTAATCCAGttagtagatttaaaaaaaaaa-------- i papAnu2.chr10 C 0 I 10 s chlSab2.chr19 18519982 2165 + 33263144 CAGAGCAGAGATCTATTCCAACTAGAGTGG--GTTTAATGCTGGGCCTCCAGGAATCACTTTACTTATCCTTGGATGATTCTAACTCCCTCTTTTTCCTCACCACCTCCCCACCCCTGCTAAGAATCATGGTTCTA--------------GGAAAT-ATTATAGA-----GTTCTTTGGTGGCAAAATGGCATCACT-GATTAAATGT-------GAGT-AACACAGAAACTTACAATAATGGTGATTCTGTCACTGCTTTTGATTGAGGTCTATCTCCTTTGAAAAGTACTTATGAAAAAAatttta----aagtatttaaattttatcttattattatttAACATTGGGGTTAAGGGGAAAAATTGCTATGATCAACTTGATGTCTTCCACCAATTATTTCTATGGTAGATGAGAGATGATTTTCAATAAATCAAACCTTTCAAACA--TTATTATTCCACATCTCCGCAAATTAGTTCATTTCCAAAATCTTGCTGGGTAGCCACATAAATA----AACTGGATTGTGAAAAGCCATCGACTATTTTCTTTCTCCTAGCATCCAGCTATC-AGCAATCCTTCTAACAAGTATGCTATTATAAAAATGAACTCACTGATCTTCTC----GGGTGAAAGGAGAAGAGGCCAAGGGAAATGCATGTCTC--ATTGTTTGAGTCCC-GTATGTCTAGATTTTTAAGGCAACTTCAAACTTATATAGCAGCACAGTCCAACTACTACTGATATTTCACTACAGGGCCCAAGGTGGGATTCAGGAATCCTATTTGTACAG-TTCTACTTCCTCTTTTTTCTCATTTCTAAATTTATAGTAGTAAGAAAATGTCCCTAACTGCTAAGATCT--AAATATAAAAAATCAGTTTAAATACCACAGGTAAATGTGACTGACAGATTAAAAGAGGTGGCAGTGATG------GGACAGTGCATATTACACAACTGGCTGGGATATGTGTCAAGAGGACAGGAGCAC----TTTTGGAGGAAGTGCCATTATGTACGGAATGTGACTGTGGGCACTGCTGAGGTAGCAGGGCTTAGATCACACGCTCACAAGTCTTGATTGTCCAAAAAAGCCTCTGTTCCCATCTCTAACGTGGAGCTGGAATGGTTAGTATAATTCAATTTTTTCACTGCAATCCACAATCTGATTGATTGGCAGGTCACACTGGCACTCCTACCTGAGGTATTTTAGCGCTAATGATTGGTTCCTGTAAGACTATTCTATAACAGAACACAGGAAGAGCAGTTCAAAAAACACAGCTGTGGAAGGAAAACAATCATACAAAAAGCCCGCTAAGGGGCCCACCAGCCTTTTCTTTCCTTTGGATGCAAGCATGCTTTTCACAGGAGGTGAATTAGGAGCAGTTTGTTATCCCATTTGAAAAGTGAATCGGGGCGAACTATGCCTTTTCTACTGGCCAGAAAAGAAGAGGGAGGGGTGGATACATCATCTAGCTGCCACACTCCCAAATCCTATCACGGTAGGTCTCTTTACAAACTA-GAACACAATTGCTAGATCAG--------TTCTCCAGAGAGGAATGTGCCATCAAAGAAACAGAAAGA----AAA-------------TGGCTAGCAGGAATCACTGTCTACGAATGGGACAGTGAAAGGGATTACAAAAGCCTTGCACAATTAATAGCCTAAATTCACTTCACTT-AAGCATAACCAGCAATTTAAAATCTTTTCCCTCGTGTCTTCTCTTCAAGCTCCAATT----CGGTGCACTTTT--TATAC----TAAACTCTCTATTCCTTCTATTTCTAAGATGCC-TTTCGGAAGAAATAAGAACTAAATGTGTACTGACAGATTTCCACAGAT-GAG-AAATGTACGGAGAGAAGCAGCACAAACTCAAAGGC-ATAA---------TGACAG-CTTTT-TGTTGTCTGTGTGTTTCTGAAGAAGT----------ATCCTTTGCTCCCTCACATGTGGAATATAGAATATGCAGTTTTAAAAGTGACAGTTGTATTAAGCCTAACTCAGTAGTTACCTCA----------TATTCTTGCTTCTCATGTGTGGGCGTGGATGTTATTTCAGCACTAGTGACCAA-CTTTTTTTCTCTAAGTAACTCTGCTTTA-----AGGTAAGAACTAAAAA---ATA-ATAACATTACTATTAATTACTTTCATTAACAAGCGGCCACTGGTCAAAAAAAATTATTTCAGCAAA-ATCACGGAATTACTTCTGTTTAGCTCAGCAAGGTAATCCAGTTAGTAGATTTAAAAAAAAAA-------- i chlSab2.chr19 C 0 I 337 s calJac3.chr1 198224890 2137 + 210400635 CAGAGCAGAGATCTATTCCAACTAGCGTGGATGTTTAATGCTAGGCCTCCAGGAATCACTTTATTTATCCTTGGATGATTCTAACTCCCTCTTTTTCCTCACCATCTCCCCAGCCCTGCTGAGAAACATGGTTCCA--------------GGAGAT----ACAGA-----GTTATTCTGTGGCAAAATGGCATCACT-GATGAAATGT-------GAGT-AACACGGAAACTTACAATAATGGTGATACTGTCACTGCTTTTGACTGAGGTCTATCTCCTTTGAAACGTACTTAC-aaaaaaatttta----aagtatttaaattttatcttattattatttaaaaCTGGGGTTAAGGGAAAAAACTGCTATGATCAACTTGATAGATT---CCTATTATTTCTATGGTAGATGAGAGATGATTTTCAATAAATCAAACCTTTCAAATA--TTATTATTCCACATCTCCCCAAATTAGTTCATTTCCAAAATCTTGCTAGGTAGTCACATAAATA----AACTGAATTGTGAAAAGCCATCGACTATTTTCTCTCTCCTAGCATCCAGCTATC-AGCAATCTTTCTAACAAGTGTGCTACTATCCAAATGAAATCACTGATCTTCTC----GGGTGAAAGGAGAAGAGGGCAAGGGAAATGCATGTCTC--AATTTTTGAGTCCT-TTAAGTCTAGATTTTTAAGGCAACTTTAAACTTACGTAGCACCACAGCCTAACTAC---------TTCACTACAGGGCCCAAAGTGGGATTCAGGAATCCTATTTGTACAG-TTTGACTTCCTCTTTTTTCTCTTTTCTAAATTTATAGTAGTGAGAAAATGTCCCCAACTGCTAAGATAT--AAATATAAAAAAACAGTTTAAATAACACAGGTAAATGTGACTGACAAATTAAAAGATGTGGCAGTGATG------GGACAGTGCATAGTATACACCTGGCTGGGATATGTGTCAAGAGGACAGGAGCACTTAATTTTGGAGGAAGTGCCATTATGTACGGAATGTGACTGTGTGCACTGCTGAGGTAGCAGGGCTTAGATCACACGCTCACAAGTCTTGATTGTCCAAAAAAGCCTCTGTTCCCATCTCTAACGTGGAGCTGGAATGGTTAGTATAATTCAATTTTTTCACTGCAATCCACAATCTGATTGATTGGCAGGTCACACTGGCACTCCTACCTGAGGTATTTTAGCGCTAATGATTGGTTCCTGTAAGACTATTCTATAACAGAACACAGGAAGAGCAGTTCAAAAAACACAGCTGTGGAAGGAAAACAATCATACAAAAAGCCCGCTAAGGGGCCCACCAGCCTTTTCTTTCCTTTGGATGCAAGCATGCTTTTCACAGGAGGTGAATTAGGAGCAGTTTGTTATCCCATTTAAAAAGTGAATTAGGGCAAACTATGCCTTTTCTCTTGGTCAGAAAGGAAGAGGGAGGGATGGATACATAATCTAGCTGCCACACTCCCAGATCCTATCACGGTAGGTCTCTTTACAAACTAGGAACACAATTGCCAGATCAG--------TTCTCCAGAGAGGAATGTGCCATAAAAGAAACAGAAAGA----AAA-------------TGGCTAGCAGGAATCACTGTCTAAGAATGGAACAGTGAAAGAGATTACAAAAACCTTGCAAAATTAATAGCCTAAATTAATTTTACTT-AAGCAAAAACAGCAATTTAAAA-------------------TCTTCAAGCTCCGATT----CAGTGCATTTTT--TATGC----TAAACTCTCTATTCCTTCTGTTTCTAATATGCC-TTTCAGAGGAAATAAGAACTAAATTTATAGTGACAGATTTCCACAGAT-GGGAAAATTTAAGGAGAGAAGCAGAACAAACTC-AAGGC-AAAA---------TAATAGTTTTTT-TGTTGTTTGTGTGTTTCTGAAGAAGT-----------TCCTTTGCTCCCTCACATGTGGAATAGAGAACACACAGGTTTAAAAGCA--AGTTATATTAGGCCTACCTCAGTAGTTACCTTA-----TAATGTATTCTCGCTTTTCATGTTTAGGCGTGGATATTATTTCAGCACTAGTGACCAA-C-TTTTTTCTCTAAATAACTCTGCTTTA-----AGATAGGAATTAAGAA---ATA-ATAACATTACTCTTAATTACTTTCATTAACAAGGGGACACTGATTCAAAAAAATTATTTCAGCAAGAAACACTCAATTACTTGTGTTTAGCTCAGTAAGGTAATCCAGTTAGTAGATT--AAAAAAAA--------- i calJac3.chr1 C 0 C 0 s mm10.chr15 77090783 1953 + 104043685 AGGAGTAGAGATCTGTTCTACTTAGCCAGG--GTCTAATGTTTGGCCTCTAAGAACCACTGGGTTTGGCCCTGGATGATCCTAATGCCCTCCT-------------TCCCCACGCCAGCTGAGAGCCTCAGCCACA--------------GGAGAC-AGT---GA-----GCTCAT-----GCAGA-------CACA-GCACAGGCTT-------GAAT-AC----AGAATTCATAATC-----------------------------------TCTGCTCTGAAGGG----------ACAAGTGTC---------ACTTAAGATCCCTCTTGTTATCATTTCAACTTGGGGTTAATGAGAGAAGCTGTTAGGATCAACTTCAT------CAGCTTTGACTAC-ATGATTTATGAGAGATGAACTTTAAT-GATTAAATCTTTCAAATACTTTGGTATTCCACATTTCTCCAAATTAGTTCATTTCTGCAATATCACTGGGT---TACATGACGT----AGCTGGGTTATTAAA--TTATGGACTATTTTTTTTCTCTGAGTGTCAAGCTATTGAGAAAACTCTCTAACAAGTGTGCTATTATCCAAG------CACCGATCTTATC----AAGTGAAAGGAGA---GGGCACAGGAGCTATGCGTC---------------CCG-GCACGTGCAGACCGATAA--CAACGCCACACTTCTGCAGCAGCACAGTCCATTTCTGACTCTGATTTTACTGAGCAGCTAAACATGGGACTTAA-----CGCCCTGTGCAG-GCAGACTTCTGCCTGCTTCCTTTTGCCATCTCTTTCACTGTTAGCA----CTCTCAGCTGCTAAGGTCT-CCAATATAAAAGACTAGTTTAAATAGCACAGGCAACTGTGACTGACAGGCTGAAAGAGGCAGCAGTGTTAGATCGTGGACTGTACATGTGATGTGCTTGTGGCTCATGTGTGCTGAGGGGGCTGGAAGGCTCA-TTCTGAAGGGAGTGGCATGATGTGTGG-ATGTGA-TGTGGGCACTGCTGAGGTAGCAGGGCTTAGATCACACGCTCACAAGTCTTGATTGTCCAAAAAAGCCTCTGTTCCCATCTCTAACGTGGAGCTGGAATGGTTAGTATAATTCAATTTTTTCACTGCAATCCACAATCTGATTGATTGGCAGGTCACACTGGCACTCCTACCTGAGGTATTTTAGCGCTAATGATTGGTTCCTGTAACACTATTCTATAACAGAACACAGGAAGAGCAGTTC-AAAAACACAGCTGTGGAAGGAAAACAATCATACAAAGAGCCCACCATGGG--CTGCCAGCCTTTTCTTTCCTTTGGATGCAAGCATGCTTTTCACAGGATGAGAATCAGGAGCA-TTTGTTACCCCACTCATAAGGTAAATTAGGGTGAACTATGGCCTTTTTAATGGGAAAAAGGGAGGCAGCAGGGATGGG---------GAGTGGACACACCCCT--ATCCTGGAAGAGAAGGGCTCTTTACAAATGGAGGATGTGATAGCTAGATCAGGACATTTTGTCTCTAATAAGTAA---GCCAT-AAGGAAGCAGAAAGA----AAGAAAAGAAAAACACTGGCTCCCAGGACCCACTCTC-------AGAACAGCAGAGGAAGACTCAGTAGC---------------GCCTACACTGAAGTACC----------------------------TCTCCCGAGCGACTTCTTCTCACTCTCTGCCTGGGCCGGAGTGGTTTTGACACAC----TAAATCCTGCTCTCACCCTACTGC-AGTATGCA-CTTCTGAGGGAACCAGCTGCAAAGGCATGGTGATGGATTTCC--AGTC-AGG-AAATGTACAGAGAGAAGCAGAACAAACTC-AGGGA-ACAG---------T--CAG-CTTGT---------GTGTGCCTTT-ATGAGCC----------CTCCTCAGCTCCCTCACACCTGCACCAT--------CAG-TTTAACAGCTCCAGCTAGAATA---CTA---TAGTA-------------------CAGCTCTGGTTTGCAGCAGAAGGCTTTGAAATGATCTCAGCACTAGTGACCAA-CTTGTGTCCTCCCAAGGACTCTGTGTTACATGGGGGAGAGGGAGAGGAA---GCAGGCAACAGGGCTCTTGCTAGC-----------AGGGGTCGCTGG-----GAAGGGTGTTCTGACTAA-GCCACTGGATTACCTGTTTAAGATTCTGT-AGATTATTCATT---TAGATT--GAAAAACAA-------- i mm10.chr15 C 0 C 0 s canFam3.chr10 40849156 2211 - 69331447 GGGAGCAGAGATCTAGCCCAAGGAACATGG--GTTGAATGCCGTGCCTCTGGGGACCACTTTATTTGTCCCTACCCAATTGTAACTCTTCCCTTCT-CTTGCCTCTTCCCCGCTCCAGCTGAGAGCCATTGCTCTAGATGGACCCTGCAGGAAGGG-CTCTTAGAAGACTGTTCTTCTGTGGCAACATGGCACCCCTGGATTAAATGTAACACAGAAGTGAATACAAACACTTGTAATAATGATAATATTGTTGCTGTTTTTGATGGAGACCTATCTACTTTTAAAAGTAGATAAGAAAAGGTCTTAAGGAGAAGtatttaaattttattttattattatttaaaattGGGGTGAAGGGAAGAAACTGTTAGGATCAACTTCTTATCTTCCACTTGTGACTTGAACGGTAGATGAGAGATGATTTTTAACGAATCACACACTCCA----------TATTTCACATCTCCCCAAATTAGTTCATTTCCCAAATCTCGCTAGGTGGGCACAAGGAGAGACTAGCTGAATTG-GACAGGCTGTCAGTGGTTCTCTTTCCCCAAGCATCCAGCTATC-AGCAAACCT----AATAGTGTGTTATT-TCCAAATGAACTCCCTGACCTTTTTTTTAAGAAGAAAGGCGAAGAGGGCAAGGGGAATACATGTTTTCAAGTTTTAAAGTCCCAGTGGGTCTAGATTTTC-AGGCAACTTCAAACTTGGGTAACAGCACAGTCCAATCACTACTACAGTCTCACTTGGGGGCCCATTCGGGGTTTCAGGAGTTTTGTGTGCACAGACTTGATTTCCTCCCTTTCCTCATTTCT---TTCACAGTGGAGAGAAAATGTCCCCACCTGCTAAGATCTCCAAGTATAAAAGCCCAGTTTAAATACCATGGATAAATGTGATTGACAAATTAAAAGAGGTGGCAGTGATG------GGACAGTGCATAGCACACGCCTGGTGTGGACA-GCAGCAATGGGACAGGAGCACTTAATTTTGGAGGAGGTGCCATCACGTATAGAACTTGACTGT--GCGCTGCTGAGGTAGCAGGGCTTAGATCACACGCTCACAAGTCTCGGTTGTCCAAAAAAGCCTCTGTTCCCATCTCTAACGTGGAGCTGGAATGGTTAGTATAATTCAATTTTTTCACTGCAATCCACAATCTGATTGATTGGCAGGTCACACTGGCACTCCTACCTGAGGTATTTTAGCGCTAATGATTGGTTCCTGTAAGACTATTCTATAACAGAACACAGGAAGAGCAGTTCAAAAAACACAGCTGTGGAAGGAAAACAATCATACAAAAAGCCCGCTAAGGGGCCCACCAGCCTTTTCTTTCCTTTGGATGCAAGCATGCTTTTCACAGGATAAGAATCAGGAGTAGTTTGTTATCCC-TTTAAAAAGTGAATTAGGGCGAAGTATGCCTTTTCTACTGGTCAAGAAAAAGAGGGGCGGGGAGGACACAC-ATCTATCTGCTACCCTC--AGGGCTTCTCACTG-GAGTCTCTTTACAAACTGCGGGCACAATTGCTAGATCTG--------TTCTCCAGAGAGGAACGTGCCACAAAAGAAACAGAAAGGAAGCAAA-------------CAGCTAGCAGGGATTACGGACTAACAACAGAACAG-GGAAGGGATTTAAAAAAATCTCCACAATTAATAGCCTAAATTGATGTAAATTAAAACAAAATGGGCAGCTTAAACACTTTTCCCTCATGTT---TCTTCAAGCTCTGATT----CAGTGTGCTCCA--AGTACCGGATAAACCCTCCACTCTTCCTATTGCTAATCTATTATTTCCGAGGAAACAAGGATTCAGTGTACA--GACAGATTTCAACAGGCAGGG-AAATGTACAGAAAGAAGCAGAACAAACTC-ACGGA-AACACAGAGGgtgtgaggg-tgtgtgtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtCCGTCCCTTGCTACCTCACATCTGGAAGCAGGAATATAAAGTTCTCCAAGCTGTTGTTACATGAGCCTTCACTCAACAGCTACCTCAGTGTGTAGTCTAGTCTTGTTTTTCCTTAGCAGGGTCAGATACTATTGTAGCCCTGGTGACCGA-A-TTTTCCCTCCAAGTGA--CTGCTTTA-----AGATAGGAACTAAGAAATGATA-ATAACATTATGATTAATTCTTTTTGTTAACAAGACACCACTGGTCAAACAAG--TATTTCAGTAAG-GTTACTAAATTATTTCTGACTAGTTTCATAAAAT----------GTAGATT------AAAAA--TTTTTT i canFam3.chr10 I 6 C 0 a score=5738.000000 s hg38.chr22_KI270876v1_alt 74637 5 + 263666 ACCAA s panTro4.chr22 34452160 5 + 49737984 ACCAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30868651 3 + 46535552 --CAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100420856 4 - 115148730 -TCAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80568778 2 + 95678458 ---AA i rheMac3.chr10 I 11 I 3 s macFas5.chr10 80995585 2 - 96509753 ---AA i macFas5.chr10 I 11 I 3 s papAnu2.chr10 76252655 2 + 90941950 ---aa i papAnu2.chr10 I 10 I 3 s calJac3.chr1 198227027 5 + 210400635 ATCAA i calJac3.chr1 C 0 C 0 s mm10.chr15 77092736 5 + 104043685 ACCAA i mm10.chr15 C 0 C 0 s canFam3.chr10 40851367 5 - 69331447 TTCAA i canFam3.chr10 C 0 C 0 e chlSab2.chr19 18522147 337 + 33263144 I a score=341271.000000 s hg38.chr22_KI270876v1_alt 74642 113 + 263666 GAGTATTTTATTAACAGGAACAGAA-AAATCATCTGTCTC--AATAAAATCTTACATTGTAAAGTAAGGAAGTAAGATAACTATT--AAAAAATTGGGTTGGTTGACTTA-ACAAGTTT s panTro4.chr22 34452165 113 + 49737984 GAGTATTTTATTAACAGGAACAGAA-AAATCATCTGTCTC--AATAAAATCTTACATTGTAAAGTAAGGAAGTAAGGTAACTATT--AAAAAATTGGGTTGGTTGACTTA-ACAAGTTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30868654 113 + 46535552 GAGTATTTTATTAACAGGAACAGAA-AAATCATCTGTCTC--AATAAAATCTTACATTGTAAAGTAAGGAAGTAAGATAACTATT--AAAAAATTGGGTTGGTTGACTTA-ACAAGGTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100420860 104 - 115148730 GAGTATTTTATTAACAGGAACAGAA-AAATCATCTGTCTC--AATAAAATCTTACATTGTA----AAAGAGGTAAGATAACTATT--AAAAAATTGGA-----TGACTTA-ACAAGGTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80568783 112 + 95678458 GAGTATTTTAGTAACAAGAACAGAA-AAATCATGTGTCTC-----AAAATCTTACATTGTAAAGTAAGGAAATAAGAGAACTGTTAAAAAAAATTGGGTTGGTTGACTTA-ACAAGGTT i rheMac3.chr10 I 3 C 0 s macFas5.chr10 80995590 112 - 96509753 GAGTATTTTAGTAACAAGAACAGAA-AAATCATGTGTCTC-----AAAATCTTACATTGTAAAGTAAGGAAATAAGAGAACTGTTAAAAAAAATTGGGTTGGTTGACTTA-ACAAGGTT i macFas5.chr10 I 3 C 0 s papAnu2.chr10 76252660 112 + 90941950 gagTATTTTAgtaacaagaacagaa-aaatcaTGTGTCTC-----AAAATCTTACATTATAAAGTAAGGAAATAAgagaactgttaaaaaaaattgggTTGGTTGACTTA-ACAAGGTT i papAnu2.chr10 I 3 C 0 s chlSab2.chr19 18522484 111 + 33263144 GAGTATTTTAGTAACAAGAACAGAA-AAATCATGTGTCTC-----AAAATCTTACATTGTAAAGGAAGGAAATAAGAGAACTGTT-AAAAAAACTGGGTTGGTTGACTTA-ACAAGGTT i chlSab2.chr19 I 337 C 0 s calJac3.chr1 198227032 112 + 210400635 GAGTATTTTATTAACAGGTGCAGAA-AAATCA--TGTCTC--AATAAAATCTTACATTGTGAAGTAAGGAAATGAGAGAACTATTTAAAAAAATTGG-TTGACTGACTTA-ACAAGGTT i calJac3.chr1 C 0 C 0 s mm10.chr15 77092741 110 + 104043685 -AAAATCCTTTTGATGGGCACAGAACAAATTAT-TATC-C--ATTAAGATTTTACAATGCAAAATAAGGAAACAGGAGACCCATAACCAAATATTCAGTTGGCTGGTTT----AAGGTA i mm10.chr15 C 0 C 0 s canFam3.chr10 40851372 113 - 69331447 GAGTATTTTCT----AAGTACAGAA-AAATCATTTCTCTCTTAATAAAATC-TATATTGTGAACTAAAGAAATGAAAGCACTATAAGCAAATATTTGGTTGGTTCCTTTATACAAGGTG i canFam3.chr10 C 0 C 0 a score=4500.000000 s hg38.chr22_KI270876v1_alt 74755 1 + 263666 G s panTro4.chr22 34452278 1 + 49737984 G i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30868767 1 + 46535552 G i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100420964 1 - 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80568895 1 + 95678458 G i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80995702 1 - 96509753 G i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76252772 1 + 90941950 G i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18522595 1 + 33263144 G i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198227144 1 + 210400635 G i calJac3.chr1 C 0 C 0 s canFam3.chr10 40851485 1 - 69331447 G i canFam3.chr10 C 0 C 0 e mm10.chr15 77092851 0 + 104043685 C a score=705065.000000 s hg38.chr22_KI270876v1_alt 74756 260 + 263666 AAGTAGACAAGTCtttttttttttttttttttttttttttttgagacgaagtctagctctgtcagccaggctggagtgc-agtggtgcaatctcggctcactgcaacctctgcctccagggttcaagtgattctcctgccttggcctcc--caagtagctgaaactacaagcgtgtgccaccacgcctggctaatttttgtatttttagtagagatggggtttcgccatcttggccaggctggtctcgtactcctgacttcaa s panTro4.chr22 34452279 253 + 49737984 AAGTTGACAAGTC--------tttttttttttttttttttttgagacgaagtctagctctgtcacccaggctggagtgcaagtggtgcaatctcggctcactgcaacctctgcctccagggttcaagtgattctcctgccttggcctcc--caagtagctgaaactacaagtgtgtgccaccacgcctggctaatttttgtatttttagtagagatgggatttcgccatcttggccaggctggtctcgtactcctgacttcaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30868768 259 + 46535552 AAGTAGACAAGTC---tttttttttttttttttttttttgttgagacgaagtctagctctgtcacccaggctggagtgc-agtggtgtgatcttggctcactgcaacctctgcctccagggttcaagtgattctcctgccttggccctccacaagtagctgaaactacaagtgtgtgccaccacgcccggctaatttttgtatttttagtagagatggggtttcgccatcttggccaggctggtctcgaactcctgacttcaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100420965 245 - 115148730 AAGTAGACAAGTC---------------ttttttttttttttgagacgaagtctagctctgtcacccaggctggagttc-agtggtacaatcttggctcactgtaacctctgcctccagggttcaagtgattctcctgccttggccccc--caagtagctgaaagtacaagtgtgtgccatcacacccggctaatttttgtatttttagtagagatggggtttcgccatcttggccaagctggtctcgaactcctgacttcaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80568896 243 + 95678458 AAGTAGACAAGTC----------------tttttttttttttgagacgaagtctagctctgtcacccaggctggagtgc-agtgttgtgatctcggctcactgcaacctctgcctccagggttcaagtgattctcctgcctcggtcccc--caagtagctgaaactccgagtgtgtgccaccacgcctggctaacttttgtatttttagtagagatgag-ttttgccatgttggccaggctggtcttgaactcctgacttcaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80995703 245 - 96509753 AAGTAGACAAGTC--------------tttttttttttttttgagacgaagtctagctctgtcacccaggctggagtgc-agtgttgtgatctcggctcactgcaacctctgcctccagggttcaagtgattctcctgcctccgtcccc--caagtagctgaaactacaagtgtgtgccaccacgcctggctaacttttgtatttttagtagagatgag-ttttgccatgttggccaggctggtcttgaactcctgacttcaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76252773 243 + 90941950 AAGTagacaagtc----------------tttttttttttttgagacgaagtctagctctgtcacccaggctggagtgc-agtgttgtgatctcggctcactgcaacctctgcctccagggttcaagtgattctcctgcctcggtcccc--caagtagctgaaactacaagtgtgtgccaccacgcctggctaacttttgtatttttagtagagatgag-ttttgccatgttggccaggctggtcttgaactcctgacttcaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18522596 247 + 33263144 AAGTAGACAAGtt------------ttttttttttttttttttagacggagtctagctctgtcacccaggctggagtgc-agtgttatgatcttggctcactgcaacctctgcctccagggttcaagtgattctcctgcctcggctccc--caagtagctgaaactacaagtgtgtaccactacacctggctaacttttgtatttttagtagagatggg-ttttgccatgttggccaggctggtcttgaactcccgacttcaa i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198227145 246 + 210400635 AAGTGGACAACTC---------ttttgttttttttttcccctgagatgtagtctag--ctgtttcccaggctggagtgc-agtggtgcaatcttggctcactgcaacctctgcctccagggttcaagtgattctcctgccttggcc-----caagcagctgaaactacaagtatataccaccacacctggctaatttttgtatttttaatagagatggggttttaccatgttggtcaggctggtctcaaactcctgacctcaa i calJac3.chr1 C 0 C 0 e mm10.chr15 77092851 0 + 104043685 C e canFam3.chr10 40851486 0 - 69331447 C a score=736233.000000 s hg38.chr22_KI270876v1_alt 75016 313 + 263666 gtgatccccctgcctcggcctcccaaagtgctgcgattacacacgtgagcgatgatgcctggccAAAGTAGGCAAGTC------tttttttttttttgagacggagtctcactctgtcacccaggctggactgtagtggcacgatctcagctcactgtaagctctgcctcccaggttcatgccattctcctacatcagcctcccgagtagctgggactacaggcgcccgccaccacgcctggctaattttttgtatttttagtagagacagggtttcaccatgttagccaggatggtctccatctcctgacctcatgat s panTro4.chr22 34452532 319 + 49737984 gtgatccccctgcctcggcttcccaaagtgctgcgattacacacgtgagcgatgatgcctggccAAAGTAGGCAAGTCtttttttttttttttttttgagacggagtctcgctctgtcacccaggctggactgtagtggcacgatctcagctcactgtaagctctgcctcccaggttcatgccattctcctacctcagcctcccgagtagctgggactacaggcgcccgccaccacgcctggctaattttttgtatttttagtagagacagggtttcaccatgttagccaggatggtctcgatctcctgacctcatgat i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30869027 316 + 46535552 gtgatccccctgcctcagcctcccaaagtgctgcgattacacacgtgagtgaccatgcctggccAAAGGAGGCAAGTC---ttttttttttttttttgagacggagtctcgctctgtcacccaggctggactgcagtggcacgatctcagctcactgcaagctctgcctcccaggttcatgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccacgcctggctaattttttgtatttttagtagagacagggtttcaccgtgtcagccaggatggtctcgatctcctgacctcatgat i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100421210 313 - 115148730 gtgatccccctgcctcggcctcccaaagtgctgtgattacatacatgagcaaccatgcctggccAAAGTAGGCAAGTC----tttttttttttttttgagatggagtct--ctctgtcacccaggctggactgtagtggcgtgatctcagctcactgcaagctctgcctcccgggttcatgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccacacccagctaattttttgtatttttagtacagacagggtttcaccatgttagccaggatggtctcgatctcctgacctcatgat i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80569139 314 + 95678458 gtgatctgcccgccttggcctcccaaagtgctgggattacacacataagcgaccatgcccggccAAAGTAGGAAAGTC-----ttttttttttttttgagacggagtctcactctgtcacccaggctggagtgcagtggcacaatcttggctcactgcaagctctgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgtctgccaccacgcccggctatttttttgtatttttagtagagatggggtttcaccatgttagtcaggatggtcttgatctcctgacctcgtgat i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80995948 313 - 96509753 gtgatctgcccgccttggcctcccaaagtgctgggattacacacataagcgaccatgcccggccAAAGTAGGAAAGTC------tttttttttttttgagacggagtctcgctctgtcacccaggctggagtgcagtggcacaatcttggctcactgcaagctctgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgtctgccaccacgcccggctatttttttgtatttttagtagagatggggtttcaccatgttagtcaggatggtcttgatctcctgacctcgtgat i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76253016 319 + 90941950 gtgatctgcccgccttggcctcccaaagtgctgggattacacacataagcgaccatgcccggccaaagtaggaaagtctttttttttttttttttttgagacggagtctcgctctgtcacccaggctggagtgcagtggcacaatcttggctcactgcaagctctgcctcccgggttcatgccattctcctgcctcagcctcccgagtagctgggactacaggcgtctgccaccacgcccggctaattttttgtatttttagtagagatggggtttcaccatgttagtcaggatggtcttgatctcctgacctcgtgat i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18522843 314 + 33263144 gtgatctgcccaccttggcctcccaaagtgctgggattacacacataagcgaccatgcccggccAAAGTAGGAAAGtt-----ttttttttttttttgagacagagtctccctctgtcacccaggctggagtgcagtggcacaatcttggctcactgcaagctctgccttccgggttcatgccgttctcctgcctcagcctcccgagtagctgggactacaggcgtctgccaccacgcccggcgaattttttgtatttttagtagagatggggtttcaccatgttagtcaggatggtcttgatctcctgacctcgtgat i chlSab2.chr19 C 0 C 0 e mm10.chr15 77092851 0 + 104043685 C e canFam3.chr10 40851486 0 - 69331447 C e calJac3.chr1 198227391 0 + 210400635 C a score=177485.000000 s hg38.chr22_KI270876v1_alt 75329 60 + 263666 ctgcccgcctcggcctcccaaagtgctgggattacaggcctgagccactgtgcccggccC s panTro4.chr22 34452851 60 + 49737984 ctgcccgcctcggcctcccaaagtgctgggattacaggcctgagccactgtgcccggccC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30869343 60 + 46535552 ctgcccgcctcggcctcccaaagtgctgggattacaggcctgagccactgtgcccggccC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100421523 60 - 115148730 ctgcccgcctcggcctcccaaagtgctgggattacaggcctgagccaccgtgcccagccT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80569453 60 + 95678458 ctgcctgccttggcctcccaaagtgttgggattataggcgtgagccactgtgcccggccC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80996261 60 - 96509753 ctgcctgccttggcctcccaaagtgttgggattataggcgtgagccactgtgcccggccC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76253335 60 + 90941950 ctgcctgccttggcctcccaaagtgttgggattataggcgtgagccactgtgcccggccc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18523157 60 + 33263144 ctgcctgccttggcctcccaaagtgttgggattataggcgtgagtcactgtgcccagccC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198227391 59 + 210400635 ctgcctgcctcggcctcccaaattgctgggattacacatgtgagccaccatgcctggcc- i calJac3.chr1 C 0 C 0 e mm10.chr15 77092851 0 + 104043685 C e canFam3.chr10 40851486 0 - 69331447 C a score=4095.000000 s hg38.chr22_KI270876v1_alt 75389 1 + 263666 A s panTro4.chr22 34452911 1 + 49737984 A i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30869403 1 + 46535552 A i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100421583 1 - 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80569513 1 + 95678458 A i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80996321 1 - 96509753 A i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76253395 1 + 90941950 a i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18523217 1 + 33263144 A i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198227450 1 + 210400635 A i calJac3.chr1 C 0 C 0 s mm10.chr15 77092851 1 + 104043685 A i mm10.chr15 C 0 C 0 e canFam3.chr10 40851486 0 - 69331447 C a score=24634624.000000 s hg38.chr22_KI270876v1_alt 75390 6173 + 263666 AAGTAGGCAAGTCTTAATAAGACATAAATAGGTTGTATTTAAG----AAAAATAAATCCTCAAATAAGAAACACATTAGAG----AAAAAAAC--------TTGATTTA-----AGAAATAACTCAAATGGAAAATCTT-------------GTTCTAATAGATCAGATTTCAAGAAAACAAGTTAAATA---AC--AAAGATGAGTTTCATGAGAATATGGACACTAATGTATATGGGAGAATGTACATGCTAACATCATATGTAAGTCTGTGTATTTAGAAATATGTAATCTG--GTGTA----AAAGTAGG--AGATTC-CCCAGTTCTCAAGCTTCACTGTGAACATAGGAAAAAAGATATCTTTCATTACTTGTTGAAAATATTTTGAGGAAAGAGGTGGATTTTAATTAAAGTACAAAGAGAGGTAATGAAATATGGAT-TGGTtgggttttatgcctgac--tattaataatttatgtagttctgggtaagtc----tctgagaaatatatctgt-------aagttaggaggttggaccaaa---tcatagctgaggttccttcaagTAGTTATTAAATTAAGGCATACCTTACAGGCCTATGCTAAGTAGTACAGGT-G-----AGTCACCTG---TATTTCGAAGAACTGTATCATCCCATCTCTACTTCCTGCAAAACGCAAAACCTCTGAGTGCATTCTGAAAGTGCATTAACTTTTTTAGGTTGCTTGTGAATCTCTGGTAGA---CTGTGGAAA-----CAGTTCACTAAAAAGG--ACCTCTTATTGATTTTGGAAAGTAAGGGTGGAGAAAGTATTTCTAGACAA-TTTTAACCTATCCCCACAGAATCATTTCATGCTGACAAGTTTTTCTTAT-AAAAATTTTCCCTTGATGACTTGAGCGACTAAATCAAGCTTGCATTCAGAAAAAGTCCATCTGGAGAGGTCATGATAAAAGACTTCAAAACTCAAAAACTTGTAC---TTTGTCAATTATATCACTTTGTCCACATTTTAAATA-ATATGTGACAAACCAAT-------CATGGAACTTTAGTGATAGCT---AGACAGTTTAAATAATGGAGTCC-------ATATTACTATGGCTAGTAGAGTCAGCAAA---TCTATGATAGTCAAATAGCTGTAAGAAGAGTCTGGGTTGCTGATTATGCTACTCATTTCCTCC--AA--TGGCTTTTAAG---------------------------------------------AACTAAATATCTGGCGTTTTCTCATTACTACACACTCTTTGCTGGC--------------ATCGGTTCCTTATTTGGCTATCACAAGGTCATGTTCTCTC-AAAGTAGGTAAAATAGGAAAATG-TACAGTTCAGAAAGCTTATTAACCTC----TAAATCACAGCTCTAATGATCTAAAGAGGGATGTGAAATGAGAAGAAAAGCAGAAAAGGGAAAGAGCTGGTTTAAGGTTAAGCTA---GTCCTGTTATTTATGTATGCAAATGACACGACAATAATAAAAGACTTTAAACCTGCTGATCATCTCACAAGTAAATTAATGATCCACAGAACATCTGT-GGGT----ATAGGGAAGGGAAAAGAATATGTCCAGTAGACTGACCCTTGCAATGATCAGGAAACCCAAAGGCTTAGTTTTTGCACCCAGGGGCAAGCGCAGTGGCAGAGAAGCATGCTTGCATTCTtaaatatataa--atatatatatatatatatCCACAAGGAaaaa-gaaaataaaaattaaa-taaatt---------------------------aaaaggaaa--------------aaaaccaaaccaaaccaaagaaacagaaaaaaaaagGCTGGCTTGTCAGGGGATGGGGTCGAGAAGGCCCCAGTGTGTGTACTTACATAGAGGTCAGCACCGTAAAATCCGTCCTGGTAAACCACACTGCAGAAAATCCACACaaaaacaaaaac-aaaaaaaacaaaagaacagaaaCACATTCCGGTTATTGAGGACGGCAGCATGCACATGCGCTCTACACAGGCAGGTGATGTATGAATACATAACCTGGGCTTGGGGCCTCGGCAAGTTGGTGAG-A-AAATGTGAAAGTGCACACGAAGGTTACACAGCTCCAGGACATGCGAGGAGAGGGAAAGGTGTGCAAAACTAGAATGCGCAACCTGGATATTTGGTAATTAAAGTAGGATTCACACAATAAAAAGCACTCCTAGAAGAGCCTATTATATCTATCCAAAATCTGCTGGCTT--GGAAATA--ACTTTTTGTATATGGAGT-----------ATT------------TTTAAAAATAAGCTTGCCCTAGGAGGAAGTTTC------------TTTTTAAAGAGCTTACAAAGTAGGGTA--GGGGTGAAGAGGAGTTTAA--CATG---A-AAAACTGAACCCAAAGAATTCCACTAGGGCAGGGCCTGTATGCAAAGTATGTTTTTACATTACGTTTAAGTATTTTGTTTTCAGTATTGTAATAATATGTAAATGTTTTTCTGATATCCATACATCACCTGC-TTTTTACCCTGCACATTAGACATGCGATAAGATTTGGCTGATCACACAAGCATGCAAAGTATTATTATTCAGCA-TTTTAAGAACCAATGCAACACCTCAGAAAAACAAGTCAATCAATTCTGACCAAAGTAAACAGAGAAATGTAATT------AAAAA--------AAAAACACAACCAAAAATACCCACAATGCATTGCTTTCACAAGCAGAGATAATGAGCTAAAGGTTAAGGTGATTGGTCCAAGGTCCAAGAATTGAAAGGTGCAGTGGGGATCCCAGATAGTAACAATATAATCCAGAGTGGGAAGGAGTAACTGGAAGATTTTAAGGGTTCTTTTTTGACTATAAGAGTATTCATGGAATTCTGAAAAATACAATTGATAACTGAAGTTCTGGGCTTGACCAAAGATCACCCTGTCTTAT---TTAAAAGAATACATCTGAGAAGGTAGCTGGTTAAG------AATAGAAGGGTTTATTTTCCTGTTTAG-ATAATGAATTTGTAGCAAACAGACAATGCATGACTTT---------------------------------aaaaaaaaaaaaaa----aacaaaaCCTAAGCAACACTATATTCTT-------AAGTATAGA----TTTCCAACCTTCTGAGGTACCTTTGTGCATACAGACTTATACAGACTTTCCCCAAAACATTATTTTGGGACCAAAGGACATGGAATAGCAGTAGAGATAAAAGATAAAACTTTCTTCTTCATCTCTGTGAAGTCAAGATCAGATTGTTTTA---ATTTAGA-TGATCTGTTTATTGGTTATTCAACTAAACAAGCTGGAAATTTTCACCACTACCTTCTCTGTT-ACAATAAACAAGCTGACAAGTAAAGTCATCAAATCATATTTTTAACTTGAATATGAAATAACTTATTTCTTATAGGTAGGTGGAATGTTTCTTAATTCTATTTCC----AATGACATTTGGTTGTATTTACAGGATAGCATGGTCACATTTTGGAATGCCCCAAATATGCTATGCCCTTGTATCACACAAAAGGCAAATCAAACTCATCTCTGATGTTCATTTAGCTAA---GTCCCATTCATTTTCATAGTCTCCAGTTGCAGTTAAAGTCTGA-TATTAGAAAGTAATCTGCCTCTCAGCTGCATTTTAAGGAAAAAAACAACTTGTTCAAAATGAGAAGGCTGATAAAATGGAAAGCACTGAGACCAAGTGGTGATTAATTAAACTTCAAAGATCTTAGTAAGGGGATATAGGCAAAGATTTACAAATAAGCCTTCTATAAAGAAGGGT--TGGCATTAAAAACACGAATACATTTTACCCTAAGTCAAA-TAACTTATTGGGAATATTCATCTACGTTCTAGAAGAATCCCAATATTCCCTGTATCAAATGCCACAAGGAGGCTAGAAACGTAATGATTAATGATGAAATTAGTTTACTAAGCTGAAAAGCAATTCTAGGCCATT-CCCATGAAATACTGGACTTATTCCTTGCCATCTTCCATGTAAACAGGTGGTTTAGTTAAT-AAAAAGAAAACATGGGAAATCAGTGTTCAATGTAATGCACAGAAATTGATATGATTAGACATAAAGA-TAAAATATCTTTGAGCAAATATATA---------------CCTGACACAGACTTGGTAGAGAATGGGTTCTCAAGTTTGGTCAATATACTGAAACGA-CTACATTGAACAGGACTAAATTCAACCA-CTTTATAAAGTAATTCAGCAATGTTACAAAATAAGGAAGTCCCATGTTTCT-GGTGAGTAGTCT--CTCTTTGCAAATATGACAGTAAATTCTCTTGGATTACAACGGAAGACATTTCACAAACAA-TTTTCCTAGTGTGTAAAACTTCCAAAAGGTTCCTTTTAATGTTTCATTTGAGTATTTCTTGATGAAATAATACTGCA----TATTCACTTCTT--TAAAGAGATGTCAGAGGTTGAAGGTCAAAGGTCAAGTTGAGAG-AAAAAAGGATTAAAATAAAAGTAAGTAATGGCATAAGATGGAGATGATGGAATGCATGTGATTTAAATGTCTACAAACTCCAAACAAAAGTTAATTTCTGAAGCAGTTCCCTTCCAGTGTCTTTTGGAGCCTGCCCACTTCAACA--------TAC---CTTGTCTAATAAAAATGTTTTAACTCTGTGGAATGGAGAACTTCTAATGGTACATCCATTTGGTCTatgaatgaatgaatgaatgaatgCTAAATTAGTACACCTCAAGGCTAAGCCAATTTTGCTGTCAGAAAAGGACATACAAAGGAGGTTCCTTCCCTTTATATTTTAACTAAGTAGCAGCCAACAAGCTTCTCTGCTGCTAC--TTAT-TCCTCCGTA------AGAATAC-----------------AAAAAAAAATATGTCATATTGACATTATCTGGCAGAGAAAAGGT---GAAGAG---AAATGTCACATCTTTGATG--AGGAAGTCCTTGGTACAACTGACTCATGAAAGACCACTC--TATAAAA---------------ATTTGCATTTTAGGCTGACACTGAGAAACCCCTAAAAACAAAACCTGCCATCTTCACTCCTTTT-CCCCATTCAGTAGCAAAGGATTTATTTGTTGCTATGGAATCATTCCACTGCATGAGACACCCTCCATAAAAAAATCAAACGGTGAAGGATGCTCAGCTACAGTCGCTGTTTTACCATCATTCAGAAGCCAACTGCAGTTTAATTCTTCCTACTTCTCCCTTTCTCCCTTGATTCAATTGGACTTGGTTCATCTTAGAATTAACCTCTTTTAATCCGTTTCCTACAAAGAAAGCAAATCCATTGTGGGTAACT-AGCTCTGCTGCTCACCACCCAGGCAGTGAAACCAAAGGGGAGGACACATGTGACAGCCTCTGCCCCAACACGGGGTGGTGATAAGGAGG-TGAACACAGCAGATGCAGGCTTGTACTACAATCTTGAGCTCCTCTTTTGGTTCTCTGCAGTAATGTTAATCCATATTCGTGCGCTTCTGAGTGAACTTCATGCCAACACACTGCTAGTAAACACAAGACGGTTCTGGCTACTGTCTTAAGCCATTACCATGAGGGCTTAAGGTGGCCAAAATGAAGACT--TATAATGAATTGACAGTTTGTCACATTCTGATGATGGTATATTTTGT-TTTTTGTCATCTAATCTGTTAATTTGcaaatattcactgaatgcctactctgtgacacggcaacatcccagaagttatgaaAGGGCCATGGTATTCTT----------TTTTGGTCCAACTGCTTATTTTAGAAACATACTGATTTTGGAATCTAACGCTTACCCTGGATAGGCGGGGATGGCTGTTGGAGGTACCGCTCGGACTGCACCATATACTGTCCGCCCTCTGCCCCTCAAATGGGCTCCTCTGAAAGCGGCTGCCGTGGTGGCTGCAGTAGGGTAAGGGAAGCCAGGAACTAAAGGGAGACCCAAAATATGACAGAAATTTCAACTTGCATTC------AATAGAAGGTGCACAGTCACAACTTGCTATGAACCAATTATAGAAAAGATGGAAAGATACGAACCACACCTTTTTGGAAAAGGTGGCATGCATTCAATAAACGTTCT-ACCCTGGGTCTCTCAGTGGGGAAGAAATGGAAAGAGAGACCCAACATG--CAAAAGCAAAAGATTCCATGCCTCA----TTCATCA-CAAATCTTGAGTGAGC-TTCTCTGTTCCTTCTCAATTTCAGC-TTTACAATGCAAGCTGCTGAGAAACAGGTCAAGAAGCTCTGAGAATGACTGCCATAATAAGAGACA-GAC-TTTTAATTACTGTGGGCAGTCTAAATCAGATTGACAC-AAACTCTTCAACCGGTCAG---TTATTAACCTTGCTTCCCAATGTTACTATGTCCACATAATAATTATTACTC-AAAAGAACATTCTTTTTATATTTTTACATGGTACCAACCTCTAAGGCACATAATAGTCTTTAGAcatttcatttcattagtcaatttcattctttta s panTro4.chr22 34452912 6152 + 49737984 AAGTAGGCAAGTCTTAATAAGACATAAATAGGTTGTATTTAAG----AAAAATAAATCCTCAAATAAGAAACACATTAGAG----AAAAAAAC--------TTGATTTA-----AGAAATAATTCAAATGGAAAATCTT-------------GTTCTAATAGATCAGATTTCAAGAAAACAAGTTAAATA---AC--AAAGATGAGTTTCATGAGAATATGGACACTAATGTATATGGGAGAATGTACATGCTAACATCATATGTAAGTCTGTGTATTTAGAAATGTGTAATCTG--GTGTA----AAAGTAGGATAGATTC-CCCAGTTCTCAAGCTTCACTGTGAACATAGGAAAAAAGGTATCTTTCATTACTTGTTGAAAATATTTTGAGGAAAGAGGTGGATTTTAATTAAAGTACAAAGAGAGGTAATGAAATATGGAT-TGGTtgggttttatgcctgac--tattaataatttatgtagttctgggtaagtc----tctgagaaatatatctgt-------aagttaggaggttggaccaaa---tcatagctgaggttccttcaagTAGTTATTAAATTAAGGCATACCTTACAGGCCTATGCTAAGTAGTACAGGT-G-----AGTCACCTG---TATTTCGAAGAACTGTATCATCCCATCTCTACTTCCTGCAAAACGCAAAACCTCTGAGTGCATTCTGAAAGTGCATTAACTTTTTTAGGTTGCTTGCGAATCTCTGGTAGA---CTGTGGAAA-----CAGTTCACTAAAAAGG--TCCTCTTATTGATTTTGGAAAGTAAGGGTGGAGAAAGTATTTCTAGACAA-TTTTAACCTATCCCCACAGAATCATTTCATGCTGACAAGTTTTTCTTAT-AAAAATTTTCCCTTGATGACTTGAGCAATTAAATCAAGCTTGCATTCAGAAAAAGTCCATCTGGAGAGGTCATAATAAAAGACTTCAAAACTCAAAAACTTCTAC---TTTGTCAATTATATCACTTTGTCCACATTTTAAATA-ATATGTGACAAACCAAT-------CATGGAACTTTAGTGATAGCT---AGACAGTTTAAATAATGGAGTCC-------ATATTACTATGGCTAGTAGAGTCAGCAAA---TCTATGATAGTCAAATGGCTGTAAGAAGAGTCTGGGTTGCTGATTATGCTACTCATTTCCTCC--AA--TGGCTTTTAAG---------------------------------------------AACTAAATATCTGGCGTTTTCTCATTACTACACACTCTTCGCTGGC--------------ATCGGCTCCTTATTTGGCTATCACAAGGTCATGTTCTCTCAAAAGTAGGTAAAATAGGAAAATG-TACAGTTCAGAAAGCTTATTAACCTC----TAAATCACAGCTCTAATGATCTAAAGAGGGATGTGAAATGAGAAGAAAAGCAGAAAAGGGAAAGAGCTGGTTTAAGGCTAAGCTA---GTCCTGTTATTTATGTATGCAAATGACACGACAATAATAAAAGACTTTAAACCTGCTGATCATCTCACAAGTAAATTAATGATCCACAGAACATCTGT-GGGT----ATAGGGAAGGGAAAAGAATATGTCCAGTAGACTGACCCTTGCAATGATCAGGAAACCCAAAGGCTTAGTTTTTGCACCCAGGGGCAAGCGCAGTGGCAGAGAAGCATGCTTGCATTCTTAAatatataa--atatatatatatatatatCCACaaggaaaaa-gaaaataaaaattaaa-taaatt---------------------------aaaaggaaa--------------aaaaccaaaccaaaccaaagaaacagaaaaaaaaaGGCTGGCTTGTCAGGGGATGGGGTCGAGAAGGCCCCAGTGTGTGTACTTACATAGAGGTCAGCACCGTAAAATCCGTCCTGGTAAACCACACTGCAGAAAATCCACacaaaaacaaaaac-aaaaaaaacaaaagaacagaaacaCATTCCGGTTATTGAGGACGGCAGCATGCACATGCGCTCTACACAGGCAGGTGATGTATGAATACATAACCTGGGCTTGGGGCCTCGGCAAGTTGGTGAG-A-AAATGTGAAAGTGCACACGAAGGTTACACAGCTCCAGGACATGCGAGGAGAGGGAAAGGTGTGCAAAACTAGAATGCGCAACCTGGATATTTGGTAATTAAAGTAGGATTCACACAATAAAAAGCACTCCTAGAAGAGCCTATTATATCTATCCAAAATCTGCTGGCTT--GGAAATA--ACTTTTTGTATATGGAGT-----------ATT------------TTTTAAAATAAGCTTGCCCTAGGAGGAAGTTTC------------TTTTTAAAGAGCTTACAAAGTAGGGTA--GGGGTGAAGAGGAGTTTAA--CATG---A-AAAACTGAACCCAAAGAATTCCACTAGGGCAGGGCCTGTATGCAAAGTATGTTTTTACATTACGTTTAAGTATTTTGTTTTCAGTATTGTAATAATATGTAAATGTTTTTCTGATATCCATACATCACCTGC-TTTTTACCCTGCACATTAGACATGCGATAAGATTTGGCTGATCACACAAGCATGCAAAGTATTATTATTCAGCA-TTTTAAGAACCAATGCAACACCTCAGAAAAACAAGTCAATCAATTCTGACCAAAGTAAACAGAGAAATGTAATT----AAAAAAA--------AAAAACACAACCAAAAATACCCACAATGCATTGCTTTCACAAGCAGAGATAATGAGCTAAAGGTTAAGGTGATTGGTCCAAGGTCCAAGAATTGAAAGGTGCAGTGGGGATCCCAGATAGTAACAATATAATCCAGAGTGGGAAGGAGTAACTGGAAGATTTTAAGGGTTCTTTTTTGACTATAAGAGTATTCATGGAATTCTGAAAAATACAATTGATAACTGAAGTTCTGGGCTTGACCAAAGATCACCCTGTCTTAT---TTTAAAGAATACATCTGAGAAGGTAGCTGGTTAAG------AATAGAAGGGTTTATTTTCCTGTTTAG-ATAATGAATTTGTAGCAAACAGACAATGCATGACTTT---------------------------------AAAAAAAAAAAAA--------AAAACCTAAGCAACACTATATTCTT-------AAGTATAGA----TTTCCAACCTTCTGAGGTACCTTTGTGC----------ATACAGACTTTCCCCAAAACATTATTTTGGGACCAAAAGACATGGAATAGCAGTAGAGATAGAAGATAAAACTTTCTTCTTCATCTCTGTGAAGTCAAGATCAGATTGTTTTA---ATTTAGA-TGATCTGTTTATTGGTTATTCAACTAAACAAGCTGGAAATTTTCACCACTACCTTCTCTGTT-ACAATAAACAAGCTGACAAGTAAAGTCATCAAGTCATATTTTTAACTTGAATATGAAATAACTTATTTCTTATAGGTAGGTGGAATGTTTCTTAATTCTATTTCC----AATGACATTTGGTTGTATTTACAGGATAGCATGGTCACATTTTGGAATGCCCCAAATATGCTATGCCCTTGTATCACACAATAGGCAAATCAAACTCATCTCTGATGTTCATTTAGCTAA---GTCCCATTCATTTTCATAGTCTCCAGTTGCAGTTAAAGTCTGA-TATTAGAAAGTAATCTGCCTCTCAGTTGCATTTTAAGGAAAAAAACAACTTGTTCAAAATGAGAAGGCTGATAAAATGGAAAGCACTGAGACCAAGTGGTGATTAATTAAACTTCAAAGATCTTAGTAAGGGGATATAGGCAAAGATTTACAAATAAGCCTTCTGTAAAGAAGGGT--TGGCATTAAAAACACGAATACATTTTACCCTAAGTCAAA-TAACTTATTGGGAATATTCATCTACGTTCTAGAAGAATTCCAATATTCCCTGTATCAAATGCCACAAGGAGGCTAGAAACATAATGATTAATGATGAAATTAGTTTACTAAACTGAAAAGCAATTCTAGGCCATT-CCCATGAAATACTGGACTTATTCCTTGCCATCTTCCATGTAAACAGGTGGTTTAGTTAAT-AAAAAGAAAACATGGGAAATCAGTGTTCAATGTAATGCACAGAAATTGATATGATTAGACATAAAGA-TAAAATATCTTTGAGCAAATATATA---------------CCTGACACAGACTTGGTAGAGAATGGGTTCTCAAGTTTGGCCAATATACTGAAATGA-CTACATTGAACAGGACTAAATTCAACCA-CTTTATAAAGTAATTCAGCAATGTTACAAAATAAGGAAGTCCCATGTTTCT-GGTGAGTAGTCT--CTCTTTGCAAATATGACAGTAAACTCTCTTGGATTACAATGGAAGACATTTCACAAACAA-TTTTCCTAGTGTGTAAAACTTCCAAAAGGTTCCTTTTAATGTTTCATTTGAGTATTTCTTGATGAAATAATACTGCA----TATTCACTTCTT--TAAAGAGATGTCAGAGGTTGAAGGTCAAAGGTCAAGTTGAGAG-AAAAAAGGATTAAAACAAAAGTAAGTAATGGCATAAGATGGAGATGATGGAATGCATGTGATTTAAATGTCTACAAACTCCAAACAAAAGTTAATTTCTGAAGCAGTTCCCTTCCAGTGTCTTTTGGAGCCTGCCCACTTCAACA--------TAC---CTTGTCTAATAAAAATGTTTTAACTCTGTGGAATGGAGAACTTCTAATGGTACATCCATTTGGTCTATGAATGAATGCATGAATGAATGCTAAATTAGTACACCTCAAGGCTAAGCCAATTTTGCTGTCAGAAAAGGACATACAAAGGAGGTTCCTTCCCTTTATATTTTAACTAAGTAGCAGCCAACAAGCTTCTCTGCTGCTAC--TTAT-TCCTCCGTA------AGAATAC----------------AAAAAAAAAATCTGTCATACTGACATTATCTGGCAGAGAAAAGGT---GAAGAG---AAATGTCGCATCTTTGATG--AGGAAGTCCTTGGTACAACTGACTCATGAAAGACCACTC--TATAAAA---------------ATTTACATTTTAGGCTGACACTGAGAAACCCCTAAAAACAAAACCTGCCATCTTCACTCCTTTT-CCCCATTCAGTAGCAAAGGATTTATTTGTTGCTATGGAATCATTCCACTGCATGAGACACCCTCCATAAAAAAATCAAACGGTGAAGGATGCTCAGCTACAGTCGCTGTTTTACCATCATTCAGAAGCCAACTGCAGTTTAATTCTTCCTACTTCTCCCTTTCTCCCTTGATTCAATTGGACTTGGTTCATCTTAGAATTAACCTCTTTTAATCCGTTTCCTACGAAGAAAGCAAATCCATTGTGGGTAACT-AGCTCTGCTGCTCACCACCCAGGCAGTGAAACCAAAGGGGAGGACACATGTGACAGCCTCTGCCCCAACACGGGGTGGTGATAAGGAGG-TGAACACAGCAGATGCAGGCTTGTACTACAATCTTGAGCTCCTCTTTTGGTTCTCTGCAGTAATGTTAATCCATATTCGTGCGCTTCTGAGTGAACTTCATGCCAACACACTGCTAGTAAACACAAGACGGTTCTGGCTACTGTCTTAAGCCATTACCATGAGGGCTTAAGGTGGCCAAAATGAAGACT--TATAATGAATTGACAGTTTGTTACACTCTGATGATGGTATATTTTGT-TTTTTGTCATCTAATCTGTTAATTTGcaaatattcattgaatgcctactctgtgacacggcaacatcccagaagttatgaaAGGGCCATGGTATTCTT----------TTTTGGTCCAACTG---ATTTTAGAAACATACTGATTTTGGAATCTAACGCTTACCCTGGATAGGCGGGGATGGCTGTTGGAGGTACCGCTCGGACTGCACCATATACTGTCCGCCCTCTGCCCCTCAAATGGGCTCCTCTGAAAGCGGCTGCCGTGGTGGCTGCAGTAGGGTAAGGGAAGCCAGGAACTAAAGGGAGACCCAAAATATGACAGAAATTTCAACTTGCATTC------AATAGAGGGTGCACAGTCACAACTTGCTATGAACCAATTATAGAAAAGATGGAAAGATACGAACCACACCTTTTTTGAAAAGGTGGCATGCATTCAATAAACCTTCT-ACCCTGGGTCTCTCAGTGGGGAAGAAATGGAAAGAGAGACCCAACATG--CAAAAGCAAAAGATTCCATGCCTCA----TTCATCA-CAAATCTTGAGTGAGC-TTCTCTGCTCCTTCTCAATTTCAGC-TTTACAATGCAAGCTGCTGATAAACAGGTCAAGAAGCTCTGAGAATGACCGCCATAATAAGAGACA-GAC-TTTTAATTACTGTGGGCAGTCTAAATCAGATTGACAC-AAACTCTTCAACCGGTCAG---TTATTAACCTTGCTTCCCAATGTTACTATGTGCACATAATAATTATTACTC-AAAAGAACATTCTTTTTATATTTTTACATGGTACCAACCTCTAAGGCACA----------TAGACATTTCATTTCATTAGTCAATTTCATTCTTTTA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30869404 6173 + 46535552 AAGTAGGCAAGTCTTAATAAGACATAAATAGGTTGTATTTAAG----AAAAATAAATCCTCAAATAAGAAACACATTAGAGA---AAAAAAAC--------TTGATTTA-----AGAAATAATTCAAATGGAAAATCTT-------------GCTCTAATAGATCAGATTTCAAGAAAACAAGTTAAATA---AC--AAAGATGAGTTTCATGAGAATATGGACGCTAATGTATATGGGAGAAT-TACATGCTAACATCATATGTAAGTATGTGTATTTAGAAATGTGTAATCTG--ATGTA----AAAGTAGGATAGATTC-CCCAGTTCTCAAGCTTCACTGTGAACATAGGAAAAAAGATACCTTTCATTACTTGTTGAAAATATTTTGAGGAAAGAGGTGGATTTTAATTAAAGTACAAAGAGAGGTAATGAAATATGGAT-TGGTTGGGTTTTATGCCTGACTTTATTAATAATTTATGTAGTTCTGGGTAAGTC----TCTGAGAAATATatctat-------aagttaggaggttggaccaaa---tcatggctaaggttccttcaagTAGTTATTAAATTAAGGGATACCTTACAGGCCTACGCTAAGTAGTATAGGT-G-----AGTCACCTG---TACTTCGAAGAACTGTATCATCCCATCTCTACTTCCTGCAAAACGCAAAAACTCTGAGTGCATTCTGAAAGTGCATTAACTTTTTTAGGTTGCTTGAGAATCTCTGGTAGA---CTGTGGAAA-----CAGTTCAGTAAAAAGG--TCCTCTTACGGATTTTGGAAAGTAAGGGTGGAGAAAGCATTTCTAGACAA-TTTTAACCTATCCCCACAGAATCATTTCATGCTGACAAGTTTTTCTTAT-AAAAATTTTCCCTTGATGACTTGAGCGATTAAATCAAGCTTGCATTCAGAAAAAGTCCATCTGGAGAGGTCATAATAAAAGACTTCAAAACTCAAAAACTTCTAC---TTTGTCAATTATATCACTTTGTCCACATTTTAAATA-ATATGTGACAAACCAAT-------CATGGAACTTTAGTGATAGCT---AGACAGTTTAAATAATGGAGTCC-------ATATTACTATGGCTAGTAGAGTCAGCAAA---TCTATGATAGTCAAATGGCTGTAAGAAGAGTCTGGGTTGCTGATTATGCTACTCATTTCCTCC--AA--TGGCTCTTAAG---------------------------------------------AACTAAATATCTGGCGTTTTCTCATTACTACACACTCTTCGCTGGC--------------ATCGGTTCCTTATTTGGCTATCACAAGGTCATGTTCTCTC-AAAGTAGGTAAAATAGGAAAATG-TACAGTTCAGAAAGCTTATTAACCTC----TAAATCACAGCTCTAATGATCTAAAGAGGGATGTGAAATGAGAAGAAAAGCAGAAAAGGGAAAGAGCTGGTTTAAGGCTAAGCTA---GTCCTGTTATTTATGTATGCAAATGACACGACAATAATAAAAGACTTTAAACCTGCTGATCATCTCACAAGTAAATTAATGATCCACAAAACATCTGT-GGGT----ATAGGGAAGGGAAAAGAATATGTCCAGTAGACTGACCCTTGCAATGATCAGGAAACCCAAAGGCTTAGTTTTTGCACCCAGGGGCAAGCGCAGTGGCAGAGAAGCATGCTTGCATTCTTAAatatataa--atatatatatatatatatCCACaaggaaaaa-gaaaataaaaattaaa-taaatt---------------------------aaaaggaaa--------------aaaaccaaaccaaaccaaagaaacagaaaaaaaaaGGCTGGCTTGTCAGGGGATGGGGTCGAGAAGGCCCCAGTGTGTGTACTTACATAGAGGTCAGCACCGTAAAATCCGTCCTGGTAAACCACACTGCAGAAAATCCACacaaaaacaaaaac-aaaaaaaacaaaagaacagaaacaCATTCCGGTTATTGAGGACGGCAGCATGCACATGCGCTCTACACAGGCAGGTGATGTATGAATACATAACCTGGGCTTGGGGCCTCGGCAAGTTGGTGAG-A-AAATGTGAAAGTGCACACGAAGGTTACACAGCTCCAGGACATGCGAGGAGAGGGAAAGGTGTGCAAAACTGGAATGCGCAACCTGGATATTTGGTAATTAAAGTAGGATTCACACAATAAAAAGCACTCCTAGAAGAGCCTATTATATCTATCCAAAATCTGCTGGCTT--GGAAACA--ACTTTTTGTATATGGAGT-----------ACT------------TTTAAAAATAAGCTTGCCCTAGGAGGAAGTTTC------------TTTTTAAAGAGCTTACAAAGTAGGGTA--GGGGTGAAGAGGAGTTTAA--CATG---A-AAAACTGAACCCAAAGAATTCCACTAGGGCAGGGCCTGTATGCAAAGTATGTTTTTAAATTACGTTTAAGTATTTTGTTTTCAGTATTATAATAATATGTAAATGTTTTTCTGATATCCATACATCACCTGC-TTTTTACCCTGCACATTAGACATGCGATAAGATTTGGCTGATCACACAAGCATGCAAAGTATTATTATTCAGCA-TTTTAAGAACCAATGCAACACCTCAGAAAAACAAGTCAATCAATTCTGACCAAAGTAAACAGAGAAATGTAATT-----AAAAAA--------AAAAACACAACCAAAAATACCCACAATGCATTGCTTTCACAAGCAGAGATAATGAGCTAAAGGTTAAGGTGATTGGTCCAAGGTCCAAGAATTGAAAGGTGCAGTGGGGATCCCAGATAGTAACAATATAATCCAGAGTGGGAAGGAGTAACTGGAAGATTTTAAGGGTTCTTTTTTGACCATAAGAGTATTCATGGAATTCTGAAAAATACAATTGATAACTGAAGTTCTGGGATTGACCAAAGAACATCCTGTCTTAT---TTAAAAGAATAAATCTGAGAAGGTAGCTGGTTAAG------AATAGAAGGGTTTATTTTCCTGTTTAG-ATAATGAATTTGTAGAAAACAGACAATGCATGACttt---------------------------------aaaaaaaaaaaaaa----a--aaaaCCTAAGCAACACTATATTCTT-------AAATATAGA----TTTCTAACCTTCTGAGGTACCTTTGTGC----------ATACAGACTTTCCCCAAAACATTATTGTGGGACCAAAAGACATGGAATAGCAGTAGAGATAAAAGATAAAACTTTCTTCTTCATCTCTGTGAAGTCAAGATCAGACTGTTTTA---ATTTAGA-TGATCTGTTTATTGG---TTCAACTAAACAAGCTGGAAATTTTCACCACTACCTTCTCTGTTAACAATAAACAAGCTGACAAGTAAAGTCATCAAATCATATTTTTAACTTGAATATGAAATAACTTGTTTCTTATAGGTAGGTGGAATGTTTCTTAATTCTATTCCC----AATGACATTTGGTTGTATTTACAGGATAGCATGGTCACATTTTGGAATGCCCCAAATATGCTATGCCCTTGTATCACACAATAGGCAAATCAAACTCATCTCTGATGTTCATTTAGCTAA---GTCCCGTTCATTTTCATAGTCTCCAGTTGCAGTTAAAGTCTGA-TATTAGAAAGTAATCTGCCTCTCAATTGCATTTTAATGAAAAACACAACTTGTTCAAAATGAGAAGGCTGATAAAATGGAAAGCACTGAGACCAAGCGGTGATTAATTAAACTTCAAAGATCTTAGTAAGGGGATATAGGCAAAGATTTACAAATAAGCCTTCTATAAAGAAGGGT--TGGCATTAAAAACACGAATACATTTTACCCTAAGTCAAATTAACTTACTGGGAATATTCATCTACGTTCTAGAAGAATTCCAATATTCCCTGTATCAAATGCCACAAGGAGGCTAG-AACATAATGATTAATGATGAAATTAGTTTACTAAGCTGAAAAGCAATTCTAGGCCATT-CCCATGAAATACTGGACTTATTCCTTGCCATCTTCCATGTAAACAGGTGGTTTAGTTAAT-AAAAAGAAAACATGGGAAATCAGTGTTCAATGTAATGCACAGAAATTCATATGATTAGACATAAAGA-TAAAATATCTTTGAGCAAATATATA---------------CCTGACACAGACTTGGTAGAGAATGGGTTCTCAAATTTGGCCAATATACTGAAATGA-CTACATTGAACACGACTAAATTCAACCA-CTTTATAAAGTAATTCAGCAATGTTACAAAATAGGGAAATCCCATGTTTCT-GGTGAGTAGTCT--CTCTTTGCAAATATGACAGTAAACTCTCTTGGATTACAATGGAAGACATTTCACAAACAA-TTTTCCTAGTGTGTAAAACTTCCAAAAGGTTCCTTTTAATGTTTCATTTGAGTATTTCTTGATGAAATAATACTGCA----TATTCACTTCTT--TAAAGAGATGTCAGAGGTTGAAGGTCAAAGGTCAAGTTGAGAG-AAAAAAGGATTAAAATAAAAGTAAGTAATGGCATAAGATGGAGATGATGGAATGCATGTGATTTAAATGTCTACAAACTCCAAACAGAAGTTAATTTCTGAAGCAGTTCCCTTCCAGTGTCTTTTGGAGCCTGCCCACTTCAACA--------TAC---CTTGCCTAATAAAAATGTTTTAACTCTGTGGAATGGAGAACTTCTAATGGTACATCCATTTGGTCTACgaatgaatgaatgaatgaatgCTGAATTAGTACACCTCAAGGCTAAGCCAATTTTGCTGTCAGAAAAGGACATACAAAGGAGGTTCCTTCCCTTTATATTTTAACTAAGTAGCAGCCAACAAGCTTCTCTGCTGCTAC--TTAT-TCCTCCGTT------AGAATAC--------AAAAAAAAAAAAAAAAAATCTGTCATATTGACA-TATCTGGCAGAGAAAAGAT---GAAGAG---AAATGTCACATCTTTGATG--AGGAAGTCCGTGGTACAACTGACTTATGAAAGACCACTC--TATAAAA---------------ATTTACATTTTAGGCTGACACTGAGAAACCCCTAAAAACAAAACCTGCCATCTTCACTCCTTTT-CCCCATTCAGTAGCAAAGGATTTATTTGTTGCTATGGAATCATTCCACTGCATGAGACACCCTCCATAAAAAAATCAAACGGTGAAGGATGCTCAGCTACAGTCATTGTTTTACCATCATTCAGAAGCCAACTGCAGTTTAATTCTTCCTACTTCTCCCTTTCTCCCTTGATTCAATTGGACTTGGTTCATCTTAGAATTAACCTCTTTTAATCCGTTTCCTACAAAGAAAGCAAATCCATTGTGGGTAACT-AGCTCTGCTGCTCACCACCCAGGCAGTGAAATCAAAGGGGAGGACACATGTGACAGCCTCTGCCCCAACACGGGGTGGTGATAAGGAGG-TGAACACAGCAGATGCAGGCTTGTACTACAATCTCGAGCTCCTCTTTTGGTTCCCTGCAGTAATGTTAATCCATATTCGTGCGCTGCTGAGTGAACTTCATGCCAACACACTGCTAGTAAACACAAGACGGTTCTGGCTACTGTCTTAAGCCATTACCATGAGGGCTTAAGGTGGCCAAAACGAAGACT--TATAATGAATTGACAGTTTGTTACATTCTGATGATGGTATATTTTGG-TTTTTGTCATCTAATCTGTTAATTTGCAAATATTCACTGAATGTCTACTCTGTGACACGGCAACATCCCAGAAGTTATGAGAGGGCCATGGTATTCTT----------TTTTGGTCCAACTGCTTATTTTAGAAACATATTGATTTTGGAATCTAACGCTTACCCTGGATAGGCGGGGATGGCTGTTGGAGGTACCGCTCGGACTGCACCATATACTGTCCGCCCTCTGCCCCTCAAATGGGCTCCTCTGAAAGCGGCTGCCGTGGTGGCTGCAGTAGGGTAAGGGAAGCCAGGAACTAAAGGGAGACCCAAAATATGACAGAAATTTCAACTTGCATTC------AATAGAGGGTGCACAGTCACAACTTGCTATGAACCAATTATAGAAAAGATGGAAAGATACGAACCACATCTTTTTTGAAAAGGTGGCATACATTCAATAAACCTTCT-ACCCTGGGTCTCTCAGTGGGGAAGAAATGGAAAGAGAGACCCAACATG--CAAAAGCAAAAGATTCCATGCCTCA----TTCATCA-CAAATCTTGAGTGAGCTTTCTCTGTTCCTTCTCAATTTCGGC-TTTACAATGCAAGCTGCTGAGAAACAGGTCAAGAAGATCTGAGAATGACTGCCATAATAAGAGACA-GAC-TTTTAATTACTGTGGGCAGTCTAAATCAGATTGACAC-AAACTCTTCAACCGGTCAG---TTATTAACCTTGCTTCCAAATGTTACTATGTGCATATAATAATTATTACTC-AAAAGAACATTCTTTTTATATTTTTACATGGTACCAACCTCCAAGGCCCATAATAGTCTTTAGGCATTTCATTTCATTAGTCAATTTCATTCtttta i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100421584 6150 - 115148730 AAGTAGGCAAGTCTTAATAAGACATAAATAGGTTGTATTTAAG----AAAAATAAATCCCCAAATAAGAAACACATTAGAG----AAAAAAAC--------TTGATTTA-----AGAAATAATTCAAATGGAAAATCTT-------------GCTCTAATAGATCAGATTTCAAGAAAACAAGTTAAATA---AC--GAAGATGAGTTTCATGAGAATATGGATGCTAATGTATATGGGAGAATGTACATGCTAACATCATATGTAAGTATGTGTATTTAGAAATGTGTAATCTG--GTGTA----AAAGTAGGATAGATTC-CCCAGTTCTCAAGCTTCACTGTGAACATAGGAAAAAAGATCTCTTTCATTACTTGTTGAAAATATTTTGAGGAAAGAGGTGGATTTTAATTAAAGTACAAAGAGAGGTAATGAAATATGGAT-TGGTTGGGTTTTATGACTGACTTTATTAATAATTTATGTAGTTCTGGGTAAGTC----TCTGAGAAATATATCTAT-------AAGTTAGGAGGTTGGACCAAA---TCATGGCTAAGTTTCCTTCAAGTAGTTATTAAATTAAGGCATACCTTACAGGCCTACGCTAAGTAGTATAGGT-G-----AGTCACCCG---TACCTCGAAGAACTGTATCATCCCATCTCTACTTCCTGCAAAACGCAAAACCTCTGAGTGCATTCTGAAAGTGCGTTAACTTTTTTAGGTTGCTTGAGAATCTTTGGTAGA---CTGTGGAAA-----CAGTTCACTAAAAAGG--TCCTCTTATTGATTTTGGAAAGTAAGGGTGGAGAAAGCATTTCTAGACAA-TTTTAACCTATCCCCACAGAATCATTTCATGCTGACAAGTTTTTCTTAT-AAAAATTTTCCCTTGATGACTTGAGCGATTAAATCAAGCTTGCATTCAGAAAAAGTCCATCTGGAGAGGTCATAATAAAAGACTTCAAAACTCAAAAACTTCTAC---TTTGTCAATTGTATCACTTTGTCCACATTTTAAATA-ATATGTGACAAACCAAT-------CATGGAACTTTAGTGATAGCT---AGACAGTTTAAGTAATGGAGTCC-------ATATTACTATGGCTAGTAGAGTCAGCAAATCTTCTATGATAGTCAAATGGCTGTAAGAAGAGTCTGGGTTGCTGATTATGCTACTCGTTTCCTCC--AA--TGGCTCTTAAG---------------------------------------------AACTAAATATCTGGCATTTTCTCATTACTACACACTCTTCGCTGGC--------------ATCGGTTCCTTGTTTGGCTATCACAAGGTCATGTTCTCTC-AAAGTAGGTAAAATAGGAAAATG-TACAGTTCAGAAAGCTTATTAACCTC----TAAATCACAGCTTTAATGATCTAAAGAGGGATGTGAAATGAGAAGAAAAGCAGAAAAGGGAAAGAGCTGGTTTAAGGCTAAGCTA---GTCCTGTTATTTATGTATGCAAATGACACGACAATAATAAAAGACTTTAAACCTGCTGATCATCTCACAAGTAAATTAATGATCCACAGAACATCTGT-GGGT----ATAGGGAAGGGAAAAGAATATGTCCAGTAGACTGACCCTTGCAATGATCAGGAAACCCAAAGGCTTAGTTTTTGCACCCAGGGGCAAGCGCAGTGGCAGAGAAGCATGCTTGCATTCTtaaatatataa--atatatatatatatatatCCACaaggaaaaa-gaaaataaaaattaaa-taaatt---------------------------aaaaggaaa--------------aaaaccaaaccaaaccaaagaaacagaaaaaaaaaGGCTGGCTTGTCAGGGGATGGGGTCGAGAAGGCCCCAGTGTGTGTACTTACATAGAGGTCAGCACCGTAAAATCCGTCCTGGTAAACCACACTGCAGAAAATCCACacaaaaacaaaaac-aaaaaaaacaaaaaaacagaaacaCATTCCGGTTATTGAGGACGGCAGCATGCACATGCGCTCTACACAGGCAGGTGATGTATGAATTCATAACCTGGGCTTGGGGCCTCAGCAAGTTGGTGAG-A-AAATGTGAAAGTGCACACGAAGGTTACACAGCTCCAGGACATGCGAGGAGAGGGAAAGGTGTGCAAAACTGGAATGCGCAACCTGGATATTTGGTAATTAAAGTACGATTCACACAATAAGAAGCACTCCTAGAAGAGCCTATTATATCTATCCAAAATCTGCTGGCTT--GGAAACA--ACTTTTTGTATATGGAGT-----------ATT------------TTTAAAAATAAGCTTGCCCTACGAGGAAGTTTC------------TTTTTAAAGAGCTTACAAAGTAGGGTA--GGGGTGAAGACGAGTTTAA--CATG---A-AAAACTGAACCCAAAGAATTCCACTAGGGCAGGGCCTGTATGCAAAGTATGTTTTTAAATTACGTTTAAGTATTTTGTTTTCAGTATTGTAATAATATGTAAATGTTTTTCTGATATCCATACATCACCTGC-TTTTTACCCTGCACATTAGACATGCGATAAGATTTGGCTGATCACACAAGCATGCAAAGTATTATTATTCAGCA-TTTTAAGAACCAATGCAACACCTCAGAAAAACAAGTCAATCAATTCTGACCAAAGTAAACAGAGAAATGTAATT-----AAAAAA--------AAAAACACAACCAAAAATACCCACAATGCATTGCTTTCACAAGCAGAGATAATGAGCTAAAGGTTAAGGTGATTGGTCCAAGGTCCAAGAATTGAAAGGTGCAGTGGGGATCCCAGATAGTAACAATATAATCCAGAGTGGGAAGGAGTAACTGGAAGATTTTAAGGGTCCTTTTTTGACCATAAGAGTATTCATGGAATTCTGAAAAATACAATTGATTACTGAAGTTCTGGGATTGACCAAAGAACACCCTGTCTTAT---TTAAAAGAATAAATCTGAGAAGGTAGCTGGTTAAG------AATAGAAGGGTTTATTTTCCTGTTTAG-ATAATGAATTTGTAGCAAACAGACAATGCATGACTTA---------------------------------AAAAAAAAAA-----------AAAACCTAAGCAACACTATATTCTT-------AAATATAGA----TTTCTAACCTTCTGAGGTAACTTTGTGC----------ATACAGACTTTCCCCAAAACATTATTTTGGGACCAAAAGACATGGAATAGCAGTAGAGATAAAAGATAAAACTTTCTTCTTCATCTCTGTGAAGTCAAGATCAGATTGTTTTA---ATTTAGA-TGATCTGTTTATTGGTTATTCAACTAAACAAGCTGGAAATTTTCACCACTACCTTCTCTGTT-ACAATAAACAAGCTAACAAGTAAAGTCATCAAATCATATTTTTAACTTGAATATGAAATAACTTATTTCTTATAGGTAGGTGGAATGTTTCTTAATTCTATTTCC----AATGACATTTGGTTGTATTTACAGGATAGCATGGTCACATTTTGGAATGCCCCAAATATGCTATGCCCTTGTATCACACAACAGGCAAATCAAACTCGTCTCTGATGTTCATTTAGCTAA---GTCCCGTTCATTTTCATAGTCTCCAGTTGCAGTTAAAGTCTGA-TATTAGAAAGTAATCTGCCTCTCAATTGCATTTTAATGAAAAAAACAACTTGTTCAAAATGAGAAGGCTGATAAAACGGAAAGCACTGAGACCAAGTGGTGATTAATTAAACTTCAAAGATCTTAGTAAGGGAATATAGGCAAAGATTTACAAATAAGCCTTCTATAAAGAAGGGT--TGGCATTAAAAACACAAATACATTTTACCCTAAGTCAAA-TAACTTACTGGGAATATTCATCTACGTTCTAGAAGAATTCCAATATTCCCTGTATCAAATGCCACCAGGAGGCTAG-AACATAATGATTAATGATGAAATTAGTTTACTAAGCTGAAAAGCAATTCTAGGCCATT-CCCATGAAATACTGGACTTATTCCTTGCCATCTTCCATGTAAACAGGTGGTTTAGTTAAT-AAAAAGAAAACATGGGAAATCAGTGTTCAATGTAATACACAGAAATTGATATGATTAGACATAAAGA-TAAAATATCTTTGAGCAAATATATA---------------CCTGACACAGACTTGGTAGAGAATGGGTTCTCAAGTTTGGCCAATATAATGAAATGA-CTACATTGAACAGGACTAAATTCAACCA-CTTTATAAAGTAATTCAGCAATGTTACAAAATAAGGAAGTCCCATGTTTCT-GGTGAGTAGTCT--CTCTTTGCAAATATGACAGTAAACTCTCTTGGATTACAATGGAAGACATTTCACAAACAA-TTTTCCTAGTGTGTAAAACTTCCAAAAGGTTCCTTTTAATGTTTCATTTGAGTATTTCTTGATGAAATAATACTGCA----TATTCACTTCTT--TAAAGagatgtcagaggttgaaggtcaaaggtcaagttgagag-AAAAAAGGATT-----AAAAGTAAGTAATGGCATAAGATGGAGATGATGGAATGCACGTGATTTAAATGTCTACAAACTCCAAACAGAAGTTAATTTCTGAAGCAGTTCCCTTCCAGTGTCTTTTGGAGCCTGCCCACTTCAACA--------TAC---TTTGCCTAATAAAAATGTTTTAACTCTGTGGAATGGAGAACTTCTAATGGTACATCCATTTGGTCTatgaatgaatgaatgaatgaatgctgaatTAGTACACCTCAAGGCTAAGCCAATTTTGCTGTCAGAAAAGGACATACAAAGGAGGTTCCTTCCCTTTATATTTTAACTGAGTAGCAGCCAACAAGCTTCTCTGCTGCTAC--TTAT-TCCTCCCTA------AGAATAC-------------AAAAAAAAAAAAATCTGTCATATTGACA-TATCTGGCAGAGAAAAGAT---GAAGAG---AAATGTCACATCTCTGATG--AGGAAGTCCTTGGTACAACTGACTTGTGAAAGACCACTC--TACAAAA---------------ATTTACATTTTAGGCTGACACTGAGAAACCCCTAAAAACAAAACCTGCCATCTTCACTCCTTTT-CCCCATTCAGTAGCAAAGGATTTATTTGTTGCTATGGAATCATTCCACTGCATGAGACACCCTCCATAAAAAAATCAAACGGTGAAGGATGCTCAGCTACAGTCGTCGTTTTACCATCATTCAGAAGCCAACTGCAGTTTAATTCTTCCTACTTCTCCCTTTCTCCCTTGATTCAATTGGACTTGGTTCATCTTAGAATTAACCTCTTTTAATCCGTTTCCTACAAAGAAAGCAAATCCATTGTGGGTAACT-AGTTCTGCTGCTCACCACCCAGGCAGTGAAACCAAAGGGGAGGACACATGTGACAGCCTCTGCCCCAACACGGGGTGGTGATAAGGAGG-TGAACACAGCAGATGCAGGCTTGTACTACAATGTCGAGCTCCTCTTTTGGTTCTCTGCAGTAATGTTAATCCATATTCGTGCGCTGCTGAGTGAACTTCATGCCAACACACTGCTAGTAAACACAAGACGGTTCTGGCTACTGTCTTAAGCCATTACCATGAGGGCTTAAGGTGGCCAAAATGAAGACT--TATAATGAATTGACAGTTTGTTATATTCTGATGATGGTATATTTTGG-TTTTTGTCATCTAATCTGTTAATTTGcaaatattcattgaatgtctactctgtgacacggcaacatcccagaagttATGAGAGGGCCATGGTATTCTT----------TTTTGGTCCAACTGCTTATTTTAGAAACATAATGATTTTGGAATCTAACGCTTACCCTGGATAGGCGGGGATGGCTGTTGGAGGTACCGCTCGGACTGCACCATATACTGTCCGCCCTCTGCCCCTCAAATGGGCTCCTCTGAAAGCGGCTGCCGTGGTGGCTGCAGTAGGGTAAGGGAAGCCAGGAACTAAAGGGAGACCCAAAATATGACAGAAATTTCAACTTGCATTC------AATAGAGGGTGCATAGTCACAACTTGCTATGAACCAGTTATAGAAAAGATGGAAAGATACGAACCACATCTTTTTTGAAAAGGTGGCATGCATTCAATAAACCTTCTAACCCTGGGTCTCTCGGTGGGGAAGAAATG----GAGAGACCCAACATG--CAAAAGCAAAAGATTCCATGCCTCA----TTCATCA-CAAATCTTGAGTGAGCTTTCTCTGTTCCTTCTCAATTTCGGC-TTTACAATGCAAGCTGCTGAGAAACAGGTCAAGAAGCTCTGAGAATGACTGCCATAATAAGAGACA-GAC-TT----TTACTGTGGGCAGTCTAAATCAGATTGACAC-AAACTCTTCAGCCGGTCAG---TAATTAACCTTGCTTCCAAATGTTACTATGTGCACATAATAATTATTACTC-AAAAGAATATTCTTTTTATATTTTTACATGGTACCAACCTCCAAGGCCCATAATAGTCTTTAGA-----CACTTCATTAGTCAATTTCATTCTTTTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80569514 6176 + 95678458 AAGTAGGCAAGTCTTAATAAGACAGAAATAGATTGTATTTAAG---AAAAAAAAAATCCCCAAATAAGAAACACGTTAGAG----AAAAAAAC--------TTGATTTA-----AGAAATAATCCAAATGGAAAATCTT-------------GCTCTAATAGATCAGATTTCAAGAAAACAAGTTAAATA---AC--AAAGATGAGTTTCATGAGAATATGAACACTAATGTATATGGGAG-ATGTACATGCGACCATCATATTTAAGTATGTGTATTTAGAAATGTGTAATCTG--GTGTA----AAAGTAGGATAGATTC-CCCAGTTCTCAGGCTTCATTGTGAACATAGGAAAAAAGATATCTTTCATTACTTGCTGAAAATATTTTGAGGAAAGAGGTGGATTTTAACTAAAGTTCAAAGAGAGGTAGTGAAATATGGAC-TGGTtgggttttatgcctgactgtattaataatttatgtagttctgggtaagtc----tctgagaaatatatctat-------aatttaggaggttggaccaaa---tcatggctaaggttccttcaagTAGTTATTAAATTAAGGCATACCTTACAGGCCTACTCTAAGTAGTATGCGT-G-----AGTCACCTG---TACCTCGAAGAACTGTATTATCTCATCTCTACTTCCTGCAAAACACAAAACCTCTGAGTGCATTCTGAAAGTGCATTAACTTTTTTAGGTTGCTTGAGAATCTCTGGTAGA---CTGTGCAAA-----CAGTTCACTAAAAAGG--TCCTCTTACTGATTTTGGAAAGTAAGGGTGGAGAAAGCATTTCTAGACAA-TTTTAACCAATCCCCACACAATCATTTCATGCTGACAAGTTTTTCTTATAAAAAATTTTCCCTTGATGACTTGAGTGAGTAAATCAAGCTTGCATTCAGAAAAAGTCCATCTGGAGAGGTCATAATAAAATACTTCAAAACTCAAAAATTTCTAG---TTTGTCAATTATATCACTTTGTCCACATTTTAAATA-ATACATGACAAACCAAT-------CACGGAACTTTAGTGATAGCT---AGACAGTTTAAATAATGGAGTAC-------ATATTAATATGGCTAGTAGAATCAGCAAATCTTCTATGATAGTCAAATGGCTGTAAGAAGAGTCTGGGTTGCTGATTATGCTACTCATTTCCCCC--AA--TGGCTCTTAAT---------------------------------------------AACTAAATATCTGGAGATTTCTCATTACTACACACTCTTTGCTGGC--------------ATCGGTTCCTTACTTGGCTATCACAAGGTCATATTCTCTC-AAAGTATGTAAAATAGGAAAATG-TACAGTTCAGAAAGCTTATTAACCTCTACATAAATCACAGCTCTAATGACCTAAAGAGGGATGTGAAATGAGAAGAAAAGCAGAAAAGGGAGAGAGCTGGTTTAAGGCTAAGCTG---GTCCTGTTATTTATGTATGCAAATGACACGACAATCGTAAAAGACTTTAAACCTGCTGATCATCTCACAAGTAAATTAATGATCCACAGAACATCTGT-GGGT----ATAGGGAAGGGAAAAGAATATGTCCAGTAGACTGACCCTTGCAATGATCAGGAAACCCAAAGGCTTAGTTTTTGCACCCAGGGGCAAGCGCAGTGGCAGAGAAGCATGCTTGCATTCTTAAatatataa--atatatatatatatatatCCACaaggaaaaa-gaaaataaaaattaaa-taaatt---------------------------aaaaggaaa--------------aaaaccaaaccaaaccaaag-aacag-aaaaaaaaGGCTGGCTTGTCAGGGGATGGGGTCGAGAAGGCCCCAGTGTGTGTACTTACATAGAGGTCAGCACCGTAAAATCCGTCCTGGTAAACCACACTGCAGAAAATCCACacaaaaacaaaaac-aaaaaaaacaaaagaacagaaacaCATTCCGGTTATTGAGGACGGCAGCATGCACATGCGCTCTACACAGGCAGGTGATGTATGAATACATAACCTGGGCTTGGGGCCTCGGCAGGTTGGTGAG-A-AAATGTGAAAGTGCACACGAAGGTTACACAGCTCCGGGACATGCGAGGAGAGGGAAAGGTGTGCAAAACTGGAATGCGCAACCTGGATATTCGGTAATTAAAGTAGGATTCACACAATAAAAAGCACTCCTGGAAGAGCCTATTTTATCTATCCAAAATCTGCTGGCTT--GGAAACA--ACTTTTTGTATATGGAGT-----------ATT------------TTAAAAAATCAGCTTGCCCTAGGAGGAAGTTTC------------TTTTTAAAGAGCTTACAAAATAGGGTG--GGGGTGAAGAGGAGTTTAA--CATG---A-AAAACTGAACCCAAAGAATTCCACTAGGGCAGGGCCTGTATGCAAAGTACGTTTTTAAATTACGTTTAAGTATTTTGTTTTCAGTATTGTAATAATACGTAAATGTTTTTCTGATATCCATACATCACCTGC-TTTTTACCCTGCACATTAGACATGCGATAAGATTTGGCTGATCACACAAGCATGCAAAGTATTATTATTCAGCA-TTTTAAGAACCAATGCAACACCTCAGAAAAACAAGTCAATCAATTCTGACCAAAGTAAACAGAGAAATGTAATT----AAAAAAA--------AAAAACACAACCAAAAATACCCACAATGCATTGCTTTCACAAGCAGAGATAATGAGCTAAAGGTTAAGGTGATTGGTCCAAGGTCCAAGAATTGAAAGGTGCAGTGGGGATCCCAGATAGTAACAATATAATCCAGAGTGGGAAGGAGTAACTGGAAGATTTTAAGGGTTCTTTTTTGACCATAAGAGTATTCATGGAATTCTGAAAACTACAATTGATAACTGAAGTTCTGGGCTTGACCAAAGATCGCCCTGTCTTAT---TTAAAAGAATAAAACTGAGAAGGTAGCTGGTTAGG------AATAGAA-GGTTTATTTTCCTGTTTAG-ATAATGAATTTGTAGCAAACAGACAATGCATGACTTT---TTCTTAANNNNNNNNNNNNNNNNNNNNNNGAAAAAAAAAA-----------AAAACCTAAGCAACACTATATTCTT-------AAATACAGA----TTTCCAACCTTTTGAGGTACTTTTGTGC----------ATACAGACTTCCCCAAAAACATTATTTTGGGACCAAAAGACATGGAATAGCAGTAGAGATAAAAGATAAAACTTTCTTCTTCATCTCTGTTAAGTCAAGATCAGATTGTTTTA---ATTTACA------TGCTTATTGGTTATTCAACTAAA-AAGCTGGAAATTTTCACCACTACCTTCTCTGTT-ACAATAAACAAGCTGACAAGTAAAGTCATCAAATCATATTTTTAACTTGAATATGAAATAACTTGTTTCTTACAGGTAGGTGTAATGTTTCTTAATTCTATTTCC----AATGACATTTGGTTGTATTTACAGGATAGTATGGTCACATTTTGGAATGCCCCAAATATGCTATGCCCTTGTATCACACAACAGGCAAATCAAACTCATCTCTAATGCTCATTTAGCTAA---GTCCCATTCATTTTCATAGTCTCCAGTTGCAGTTAAAGTCTGA-TATTAGAAAGTAATCTGCCTCTCAATTGCATTTTAGTGAAAAAAACAACTTGTTCAAAATGAGAAGGCTGATAAAATGGAAAGCACTGAGGCCAAGTGGTGATTAACTAAACTTCAAAGATCTTAGTAAGGGAATATAGGTAAAGATTTACAAATAAGCCTTCTATAAAGAAGGGC--TGGCATTAAAAACACAAATACATTTTACCCTAAGTCAAA-TAACTTATTGGGAATATTCATCCACATTCTAGAAGAATTCCAATATTCTCCGTATCAAATGCCACAAGGAGGCTAG-AACATAATGATTAATGATGAAATTAGTTTACTAAGCTGAAAAGCAATTCTAGGCCATT-CCCATGAAATACTGGACTTATTCCTTGCCATCTTCCATGTAAACAGGTGGTTTAGTTAAT-AAAAAGAAAACATGGGAAATCAGTGTTCAATGTAATGCACAGAAATTGATATGATTAGACATAAAGATTAAAATATCTTTGAGCAAATATATA---------------CCTGACACAGACTTGGTAGAGAAGGGGTTCTCAAGTTTGGCCAATATACTGAAATGA-CTACATTGAACAGGACTAAATTCAACCA-CTTTATAAAGTAATTCAGCAGTGTTACAAAATAAGGAAGTCCCATGTTTCT-GGTGAGTAGTCT--CTCTTTGCAAACATGACAGTAAACTCTCTTGGATTACAATGGAAGACATTTTACAAACAA-TTTTCCTAGCGTGTAAAACTTCCAAAAGATTCCTTTTAATGTTTCACTTGAATACTTCTTGATGAAATAATACTGCA----TATTCACTTCTT--TAAAGAGATGTCAGAGGTTGAAGGTCAAAGGTCAAGTTGAGAG--AAAAAGGATTAAAATAAAAGTAAGTAATGGCATAAGATGGAGATGATGGAATGCATGTGATTTAAATGTCTACAAACTCCAAACAGAAGTTAATTTCTGAAGCAGTTCCCTTCCAGTGTCTTTTGGAGCCTGCCCACTTCAACA--------TAC---CTTGTCTAATAAAAATGTTTTAACTCTGAGGAATGGAGAACTTCTAATGGTACGTCCATTTGGTCTATT----AATGAATGAATGAATGCTAAATTAGTACACCTCAAGGTTAAGCCAATTTTGCTGTCAGAAAAGGACATACAAAGGCGGCTCCTTTCCTTTATATTTTAACTAAGTAGCAGCCAACAAGCTTCTCTGCTGCTAC--CTAT-TCCTCCGTA------AGAATAC-----------------AAAAAAAAATCTGTCATATTGACA-TATCTGGCAGAGAAAAGAT---GAAGAG---AAATGTCACATCTTTGATG--AGGAAGTCCTTGGTACAACTGACTGAGGAAAGACCACTCTTTATAAAA---------------ATTTACATTTTAGGCTGACACTGAGAAACCCCTAAAAACAAAACCTGTCATCTTCACTCCTTTT-CCCCATTCAGTAGCAAAGGATTTATTTGTTGCTATGGAATCATTCCACTGCATGAGACACCCTCCATAAAAAAATCAAACGGTGAAGGATGCTCAGCTACAGTCGTCGTTTTACCATCATTCAGAAGCCAACTGCAG-TTAATTCTTCCTACTTCTCCCTTTCTCCCTTGATTCAATTGGACTTGGTTCATCTTAGAATTAACCTCTTTTAATCCGTTTCCTACAAAGAAAGCAAATCCATTGTGGGTAACT-AGCTCTGCTGCTCACCACCCAGGCAGTGAAACCAAAGGGGAGGACACATGTGACAGCCTCCGCCCCAACACGGGGTGGTGATAAGG-GG-TGAACACAGCAGATGCAGGCTTGTACTACAATCTCGAGCTCCTCTTTTGGTTCTCTGCAGTAATGTTAATCCATATTCGTGCGCTGCTGAGTGAACTTCATGCCAACACACTGCTAGTAAACACAAGACAGTTCTGGCTACTGTCTTAAGCCATTACCATGAGGGCTTAAGGTGGCCAAAATGAAGACTTATATAATGAATTGACAGTTTGTTACATTCTGATGATGGTATATTTTGG-TTTTTGTCATCTAATCTGTCAATTTGcaaatattcattgaatgtctactctgtgacacggcaacatcccagaagttATGAGAGGGCCATGGTATTCTT----------TTTTGGTCCAACTGCTTATTTCAGAAACATATTGATTTTGGAATCTAATGCTTACCCTGGATAGGCGGGGATGGCTGTTGGAGGTACCGCTCGGACTGCACCATATACTGTCCGCCCTCTGCCCCTCAAATGGGCTCCTCTGAAAGCGGCTGCCGTGGTGGCTGCAGTAGGGTAAGGGAAGCCAGGAACTAAAGGGAGACCCAAAATATGACAGAAATTTCAACTTGCATTC------AATAGAGGGTACATAGTCACAACTTGCTATGAACCTATGATAGAAAAGATGAAAAGATACAAACCACATGTTTTTTGAAAAGGTGGCATGCATTCAATAAACCTTCT-ACCCTGGGTCTCTCAGTGGGGAAGAAATGGAAAGAGAGACCCCACAAG--CAAAAGCAAAAGATTCCATGCCTCA----TTCATCA-CAAATCTTGAGTGAGCTTTCTCTGTTCCTTCTCAATTTCGGC-TTTACAATGCAAGCTGCTGAGAAACAGGTCAAGAAGCTCTGAGAATGACTGCCATCATAAGAGACA---------AATTACTGTGGGCAGTCTAAATCAGATTGACAT-AAACTCTTCAACCGGTCAG---TTATTAACCCTGCTTCCAAATGTTACTATGTGCACATAATAATTACTACTC-AAAAGAACATTCTTTTGAGATTTTTACATGGTACCAACCTCCAAGGTACATAATAGTCTTTAGA-----CATTTCATTAGTCAATTTCATTCTTTTA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 80996322 6154 - 96509753 AAGTAGGCAAGTCTTAATAAGGCAGAAATAGATTGTATTTAAGAAAAAAAAAAAAATCCCCAAATAAGAAACACGTTAGAG----AAAAAAAC--------TTGATTTA-----AGAAATAATCCAAATGGAAAATCTT-------------GCTCTAATAGATCAGATTTCAAGAAAACAAGTTAAATA---AC--AAAGATGAGTTTCATGAGAATATGAACACTAATGTATATGGGAG-ATGTACATGCGACCATCATATTTAAGTATGTGTATTTAGAAATGTGTAATCTG--GTGTA----AAAGTAGGATAGATTC-CCCAGTTCTCAGGCTTCATTGTGAACATAGGAAAAAAGATATCTTTCATTACTTGCTGAAAATATTTTGAGGAAAGAGGTGGATTTTAACTAAAGTTCAAAGAGAGGTAGTGAAATATGGAC-TGGTTGGGTTTTATGCCTGACTGTATTAATAATTTATGTAGTTCTGGGTAAGTC----TCTGAGAAATATatctat-------aatttaggaggttggaccaaa---tcatggctaaggttccttcaagTAGTTATTAAATTAAGGCATACCTTACAGGCCTACTCTAAGTAGTATGCGT-G-----AGTCACCTG---TACCTCGAATAACTGTATTATCTCATCTCTACTTCCTGCAAAACACAAAACCTCTGAGTGCATTCTGAAAGTGCATTAACTTTTTTAGGTTGCTTGAGAATCTCTGGTAGA---CTGTGCAAA-----CAGTTCACTAAAAAGG--TCCTCTTACTGATTTTGGAAAGTAAGGGTGGAGAAAGCATTTCTAGACAA-TTTTAACCAATCCCCACACAATCATTTCATGCTGACAAGTTTTTCTTATAAAAAATTTTCCCTTGATGACTTGAGTGACTAAATCAAGCTTGCATTCAGAAAAAGTCCATCTGGAGAGGTCATAATAAAATACTTCAAAACTCAAAAATTTCTAG---TTTGTCAATTATATCACTTTGTCCACATTTTAAATA-ATACATGACAAACCAAT-------CACGGAACTTTAGTGATAGCT---AGACAGTTTAAATAATGGAGTAC-------ATATTAATATGGCTAGTAGAATCAGCAAATCTTCTATGATAGTCAAATGGCTGTAAGAAGAGTCTGGGTTGCTGATTATGCTACTCATTTCCCCC--AA--TGGCTCTTAAT---------------------------------------------AACTAAATATCTGGAGATTTCTCATTACTACACACTCTTTGCTGGC--------------ATCGGTTCCTTATTTGGCTATCACAAGGTCATATTCTCTC-AAAGTATGTAAAATAGGAAAATG-TACAGTTCAGAAAGCTTATTAACCTCTACATAAATCACAGCTCTAATGACCTAAAGAGGGATGTGAAATGAGAAGAAAAGCAGAAAAGGGAGAGAGCTGGTTTAAGGCTAAGCTG---GTCCTGTTATTTATGTATGCAAATGACACGACAATCGTAAAAGACTTTAAACCTGCTGATCATCTCACAAGTAAATTAATGATCCACAGAACATCTGT-GGGT----ATAGGGAAGGGAAAAGAATATGTCCAGTAGACTGACCCTTGCAATGATCAGGAAACCCAAAGGCTTAGTTTTTGCACCCAGGGGCAAGCGCAGTGGCAGAGAAGCATGCTTGCATTCTtaaatatataa--atatatatatatatatatCCACaaggaaaaa-gaaaataaaaattaaa-taaatt---------------------------aaaaggaaa--------------aaaaacaaaccaaaccaaag-aacag-aaaaaaaaGGCTGGCTTGTCAGGGGATGGGGTCGAGAAGGCCCCAGTGTGTGTACTTACATAGAGGTCAGCACCGTAAAATCCGTCCTGGTAAACCACACTGCAGAAAATCCACACaaaaacaaaaac-aaaaaaaacaaaagaacagaaaCACATTCCGGTTATTGAGGACGGCAGCATGCACATGCGCTCTACACAGGCAGGTGATGTATGAATACATAACCTGGGCTTGGGGCCTCGGCAGGTTGGTGAG-A-AAATGTGAAAGTGCACACGAAGGTTACACAGCTCCGGGACATGCGAGGAGAGGGAAAGGTGTGCAAAACTGGAATGCGCAACCTGGATATTCGGTAATTAAAGTAGGATTCACACAATAAAAAGCACTCCTGGAAGAGCCTATTTTATCTATCCAAAATCTGCTGGCTT--GGAAACA--ACTTTTTGTATATGGAGT-----------ATT------------TTAAAAAATCAGCTTGCCCTAGGAGGAAGTTTC------------TTTTTAAAGAGCTTACAAAATAGGGTG--GGGGTGAAGAGGAGTTTAA--CATG---A-AAAACTGAACCCAAAGAATTCCACTAGGGCAGGGCCTGTATGCAAAGTACGTTTTTAAATTACGTTTAAGTATTTTGTTTTCAGTATTGTAATAATACGTAAATGTTTTTCTGATATCCATACATCACCTGC-TTTTTACCCTGCACATTAGACATGCGATAAGATTTGGCTGATCACACAAGCATGCAAAGTATTATTATTCAGCA-TTTTAAGAACCAATGCAACACCTCAGAAAAACAAGTCAATCAATTCTGACCAAAGTAAACAGAGAAATGTAATT----AAAAAAA--------AAAAACACAACCAAAAATACCCACAATGCATTGCTTTCACAAGCAGAGATAATGAGCTAAAGGTTAAGGTGATTGGTCCAAGGTCCAAGAATTGAAAGGTGCAGTGGGGATCCCAGATAGTAACAATATAATCCAGAGTGGGAAGGAGTAACTGGAAGATTTTAAGGGTTCTTTTTTGACCATAAGAGTATTCATGGAATTCTGAAAACTACAATTGATAACTGAAGTTCTGGGCTTGACCAAAGATCGCCCTGTCTTAT---TTAAAAGAATAAAACTGAGAAGGTAGCTGGTTAAG------AATAGAA-GGTTTATTTTCCTGTTTAG-ATAATGAATTTGTAGCAAACAGACAATGCATGACTTT---TTCTT-------------------------AAAAAAAAAA-----------AAAACCTAAGCAACACTATATTCTT-------AAATACAGA----TTTCCAACCTTTTGAGGTACTTTTGTGC----------ATACAGACTTCCCCAAAAACATTATTTTGGGACCAAAAGACATGGAATAGCAGTAGAGATAAAAGATAAAACTTTCTTCTTCATCTCTGTTAAGTCAAGATCAGATTGTTTTA---ATTTACA------TGCTTATTGGTTATTCAACTAAA-AAGCTGGAAATTTTCACCACTACCTTCTCTGTT-ACAATAAACAAGCTGACAAGTAAAGTCATCAAATCATATTTTTAACTTGAATATGAAATAACTTGTTTCTTACAGGTAGGTGTAATGTTTCTTAATTCTATTTCC----AATGACATTTGGTTGTATTTACAGGATAGTATGGTCACATTTTGGAATGCCCCAAATATGCTATGCCCTTGTATCACACAACAGGCAAATCAAACTCATCTCTAATGCTCATTTAGCTAA---GTCCCATTCATTTTCATAGTCTCCAGTTGCAGTTAAAGTCTGA-TATTAGAAAGTAATCTGCCTCTCAATTGCATTTTAGTGAAAAAAACAACTTGTTCAAAATGAGAAGGCTGATAAAATGGAAAGCACTGAGGCCAAGTGGTGATTAACTAAACTTCAAAGATCTTAGTAAGGGAATATAGGTAAAGATTTACAAACAAGCCTTCTATAAAGAAGGGC--TGGCATTAAAAACACAAATACATTTTACCCTAAGTCAAA-TAACTTATTGGGAATATTCATTCACATTCTAGAAGAATTCCAATATTCTCCATATCAAATGCCACAAGGAGGCTAG-AACATAATGATTAATGATGAAATTAGTTTACTAAGCTGAAAAGCAATTCTAGGCCATT-CCCATGAAATACTGGACTTATTCCTTGCCATCTTCCATGTAAACAGGTGGTTTAGTTAAT-AAAAAGAAAACATGGGAAATCAGTGTTCAATGTAATGCACAGAAATTGATATGATTAGACATAAAGATTAAAATATCTTTGAGCAAATATATA---------------CCTGACACAGACTTGGTAGAGAAGGGGTTCTCAAGTTTGGCCAATATACTGAAATGA-CTACATTGAACAGGACTAAATTCAACCA-CTTTATAAAGTAATTCAGCAGTGTTACAAAATAAGGAAGTCCCATGTTTCT-GGTGAGTAGTCT--CTCTTTGCAAACATGACAGTAAACTCTCTTGGATTACAATGGAAGACATTTTACAAACAA-TTTTCCTAGCGTGTAAAACTTCCAAAAGATTCCTTTTAATGTTTCATTTGAATACTTCTTGATGAAATAATACTGCA----TATTCACTTCTT--TAAAGagatgtcagaggttgaaggtcaaaggtcaagttgagag--AAAAAGGATTAAAATAAAAGTAAGTAATGGCATAAGATGGAGATGATGGAATGCATGTGATTTAAATGTCTACAAACTCCAAACAGAAGTTAATTTCTGAAGCAGTTCCCTTCCAGTGTCTTTTGGAGCCTGCCCACTTCAACA--------TAC---CTTGTCTAATAAAAATGTTTTAACTCTGAGGAATGGAGAACTTCTAATGGTACGTCCATTTGGTCTATT----AATGAATGAATGAATGCTAAATTAGTACACCTCAAGGTTAAGCCAATTTTGCTGTCAGAAAAGGACATACAAAGGCGGCTCCTTTCCTTTATATTTTAACTAAGTAGCAGCCAACAAGCTTCTCTGCTGCTAC--CTAT-TCCTCCGTA------AGAATAC-----------------AAAAAAAAATCTGTCATATTGACA-TATCTGGCAGAGAAAAGAT---GAAGAG---AAATGTCACATCTTTGATG--AGGAAGTCCTTGGTACAACTGACTGAGGAAAGACCACTCTTTATAAAA---------------ATTTACATTTTAGGCTGACACTGAGAAACCCCTAAAAACAAAACCTGCCATCTTCACTCCTTTT-CCCCATTCAGTAGCAAAGGATTTATTTGTTGCTATGGAATCATTCCACTGCATGAGACACCCTCCATAAAAAAATCAAACGGTGAAGGATGCTCAGCTACAGTCGTCGTTTTACCATCATTCAGAAGCCAACTGCAG-TTAATTCTTCCTACTTCTCCCTTTCTCCCTTGATTCAATTGGACTTGGTTCATCTTAGAATTAACCTCTTTTAATCCGTTTCCTACAAAGAAAGCAAATCCATTGTGGGTAACT-AGCTCTGCTGCTCACCACCCAGGCAGTGAAACCAAAGGGGAGGACACATGTGACAGCCTCCGCCCCAACACGGGGTGGTGATAAGG-GG-TGAACACAGCAGATGCAGGCTTGTACTACAATCTCGAGCTCCTCTTTTGGTTCTCTGCAGTAATGTTAATCCATATTCGTGCGCTGCTGAGTGAACTTCATGCCAACACACTGCTAGTAAACACAAGACAGTTCTGGCTACTGTCTTAAGCCATTACCATGAGGGCTTAAGGTGGCCAAAATGAAGACTTATATAATGAATTGACAGTTTGTTACATTCTGATGATGGTATATTTTGG-TTTTTGTCATCTAATCTGTCAATTTGCAAATATTCATTGAATGTCTACTCTGTGACACGGCAACATCCCAGAAGTTATGAGAGGGCCATGGTATTCTT----------TTTTGGTCCAACTGCTTATTTCAGAAACATATTGATTTTGGAATCTAATGCTTACCCTGGATAGGCGGGGATGGCTGTTGGAGGTACCGCTCGGACTGCACCATATACTGTCCGCCCTCTGCCCCTCAAATGGGCTCCTCTGAAAGCGGCTGCCGTGGTGGCTGCAGTAGGGTAAGGGAAGCCAGGAACTAAAGGGAGACCCAAAATATGACAGAAATTTCAACTTGCATTC------AATAGAGGGTACATAGTCACAACTTGCTATGAACCAATGATAGAAAAGATGAAAAGATACAAACCACATGTTTTTTGAAAAGGTGGCATGCATTCAATAAACCTTCT-ACCCTGGGTCTCTCAGTGGGGAAGAAATGGAAAGAGAGACCCCACAAG--CAAAAGCAAAAGATTCCATGCCTCA----TTCATCA-CAAATCTTGAGTGAGCTTTCTCTGTTCCTTCTCAATTTCGGC-TTTACAATGCAAGCTGCTGAGAAACAGGTCAAGAAGCTCTGAGAATGACTGCCATCATAAGAGACA---------AATTACTGTGGGCAGTCTAAATCAGATTGACAT-AAACTCTTCAACCGGTCAG---TTATTAACCCTGCTTCCAAATGTTACTATGTGCACATAATAATTACTACTC-AAAAGAACATTCTTTTGAGATTTTTACATGGTACCAACCTCCAAGGTACATAATAGTCTTTAGA-----CATTTCATTAGTCAATTTCATTCTTTTA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76253396 6156 + 90941950 aagtAGGCAAGTCTTAATAAGACAGAAATAGattgtatttaag---aaaaaaaaaatccccaaataagaAACACGTTAGAG----aaaaaaaC--------TTGATTTA-----AGAAATAATCCAAATGGAAAATCTT-------------GCTCTAATAGatcagatttcaagaaaacaagtTAAATA---AC--AAAGATGAGTTTCATGAGAATATGAACACTAATGTATATGGGAG-ATGTACATGCGACCATCATATTTAAGTATGTGTATTTAGAAATGTGTAATCTG--GTGTA----AAAGTAGGATAGATTC-CCCAGTTCTCAAGCTTCATTGTGAACATAGGAAAAAAGATATCTTTCATTActtgctgaaaatattttgaggaaaGAGGTGGATTTTAACTAAAGTTCAAAGAGAGGTAGTGAAATATGGAC-TGGTTGGGTTTTATGCCTGACTGTATTAATAATTTATGTAGTTCTGGGTAAGTC----TCTGAGAAATATATCTAT-------AATTTAGGAGGTTGGACCAAA---TCATGGCTAAGGTTCCTTCAAGTAGTTATTAAATTAAGGCATACCTTACAGGCCTACTCTAAGTAGTATGCAT-G-----AGTCACCTG---TACCTCGAAGAACTGTATTATCTCATCTCTACTTCCTGCAAAACACAAAACCTCTGAGTGCATTCTGAAAGTACATTAACTTTTTTAGGTTGCTTGAGAATCTCTGGTAGA---CTGTGCAAA-----CAGTTCACTAAAAAGG--TCCTCTTACTGATTTTGGAAAGTAAGGGTGGAGAAAGCATTTCTAGACAA-TTTTAACCAATCCCCACACAATCATTTCATGCTGACaagtttttcttataaaaaatttTCCCTTGATGACTTGAGTGACTAAATCAAGCTTGCATTCAGAAAAAGTCCATCTGGAGAGGTCATAATAAAATACTTCAAAACTCAAAAATTTCTAG---TTTGTCAATTATATCACTTTgtccatattttaaata-atacgtGACAAACCAAT-------CACGGAACTTTAGTGATAGCT---AGACAGTTTAAATAATGGAGTAC-------ATATTAATATGGCTAGTAGAATCAGCAAATCTTCTATGATAGTCAAATGGCTGTAAGAAGAGTCTGGGTTGCTGATTATGTTACTCATTTCCCCC--AA--TGGCTCTTAAT---------------------------------------------AACTAAATATCTGGAGTTTTCTCATTACTACACACTCTTTGCTGGC--------------ATCGGTTCCTTATTTGGCTATCACAAGGTCATATTCTCTC-AAAGTAtgtaaaataggaaaatg-taCAGTTCAGAAAGCTTATTAACCTCTACATAAATCACAGCTCTAATGATCTAAAGAGGGAtgtgaaatgagaagaaaagcagaaaagggaaagagCTGGTTTAAGGCTAAGCTG---GTCCTGTTATTTATGTATGCAAATGACACGACAATCGTAAAAGACTTTAAACCTGCTGATCATCTCACAAGTAAATTAATGATCCACAGAACATCTGT-GGGT----AtagggaagggaaaagaatatGTCCAGTAGACTGACCCTTGCAATGATCAGGAAACCCAAAGGCTTAGTTTTTGCACCCAGGGGCAAGCGCAGTGGCAGAGAAGCATGCTTGcattcttaaatatataaatatatatatatatatatatccacaaggaaaaa-gaaaataaaaattaaa-taaatt---------------------------aaaaggaaa--------------aaaaccaaaccaaaccaaagaaacag-aaaaaaaaggctgGCTTGTCAGGGGATGGGGTCGagaaggccccagtgtgtgtacTTACATAGAGGTCAGCACCGTAAAATCCGTCCTGGTAAACCACACTGCAGaaaatccacacaaaaacaaaaac-aaaaaaaacaaaagaacagaaacacaTTCCGGTTATTGAGGACGGCAGCATGCACATGCGCTCTACACAGGCAGGTGATGTATGAATACATAACCTGGGCTTGGGGCCTCGGCAACTTGgtgag-a-aaatgtgaaagtgcACACGAAGGTTACACAGCTCCGGAACATGCGAGGAGAGGGAAAGGTGTGCAAAACTGGAATGCGCAACCTGGATATTCGGTAATTAAAGTAGGATTCACACAATAAAAAGCACTCCTGGAAGAGCCTATTTTATCTATCCAAAATCTGCTGGCTT--GGAAACA--ACTTTTTGTATAtggagt-----------att------------ttaaaaaatcagcttgCCCTAGgaggaagtttc------------tttttaaagagcTTACAAAATAGGGTG--GGGGTGAAGAGGAGTTTAA--CATG---A-AAAACTGAACCCAAAGAATTCCACTAGGGCAGGGCCTGTATGCAAAgtacgtttttaaattacgtttaagttttttgttttcagtattgtaataatacgtaaatgtttttCTGATATCCATACATCACCTGC-TTTTTACCCTGCACATTAGACATGCGATAAGATTTGGCTGATCACACAAGCATGCAAAGTATTATTATTCAGCA-TTTTAAGAACCAATGCAACACCTCAGAAAAACAAGTCAATCAATTCTGACCAAAGTAAACAgagaaatgtaatt----aaaaaaa--------aaaaacacaaccaaaaatACCCACAATGCATTGCTTTCACAAGCAGAGATAATGAGCTAAAGGTTAAGGTGATTGGTCCAAGGTCCAAGAATTGAAAGGTGCAGTGGGGATCCCAGATAGTAACAATATAATCCAGAGTGGGAAGGAGTAACTGGAAGATTTTAAGGGTTCTTTTTTGACCATAAGAGTATTCATGGAATTCTGAAAACTACAATTGATAACTGAAGTTCTGGGCTTGATCAAAGATCGCCCTGtcttat---ttaaaagaataaaactgagaAGGTAGCTGGTTAAG------AATAGAA-GGTTTATTTTCCTGTTTAG-ATAATGAATTTGTAGCAAACAGACAATGCatgacttt---ttctt-------------------------aaaaaaaaaa-----------aaaacctaagcaaCACTATATTCTT-------AAATACAGA----TTTCCAACCTTTTGAGGTACTTTTGTGC----------ATACAGACTTCcccaaaaacattattttgggaCCAAAAGACATGGAATAGCAGTagagataaaagataaaactttcttcttCATCTCTGTTAAGTCAAGATCagattgtttta---atttaca------tgctTATTGGTTATTCAACTAAA-AAGCTGGAAATTTTCACCACTACCTTCTCTGTT-ACAATAAACAAGCTGACAAGTAAAGTCATCAAATCATATTTTTAACTTGAATATGAAATAACCTGTTTCTTACAGGTAGGTGTAATGTTTCTTAATTCTATTTCC----AATGACATTTGGTTGTATTTACAGGATAGTATGGTCACATTTTGGAATGCCCCAAATATGCTATGCCCTTGTATCACACAATAGGCAAATCAAACTCATCTCTAATGCTCATTTAGCTAA---GTCCCATTCATTTTCATAGTCTCCAGTTGCAGTTAAAGTCTGA-TATTAGAAAGTAATCTGCCTCTCAATTGCATTTTAGTGaaaaaaaCAACTTGTTCAAAATGAGAAGGCTGATAAAATGGAAAGCACTGAGGCCAAGTGGTGATTAATTAAACTTCAAAGATCTTAGTAAGGGAATATAGGTAAAGATTTACAAACAAGCCTTCTATAAAGAAGGGC--TggcattaaaaacacaaatacattttacCCTAAGTCAAA-TAACTTATTGGGAATATTCATCTACATTCTAGAAGAATTCCAATATTCTCCGTATCAAATGCCACAAGGAGGCTAG-AACATAATGATTAATGATGAAATTAGTTTACTAAGCTGAAAAGCAATTCTAGGCCATT-CCCATGAAATACTGGACTTATTCCTTGCCATCTTCCATGTAAACAGGTGGTTtagttaat-aaaaagaaaacatgggaaaTCAGTGTTCAATGTAATGCACAGAAATTGATATGATTAGACATAAAGATTAAAATATCTTTGAGCAAATATATA---------------CCTGACACAGacttggtagagaaggggttctCAAGTTTGGCCAATATACTGAAATGA-CTACATTGAACAGGACTAAATTCAACCA-CTTTATAAAGTAATTCAGCAGTGTTACAAAATAAGGAAGTCCCATGTTTCT-GGTGAGTAGTCT--CTCTTTGCAAACATGACAGTAAACTCTCTTGGATTACAATGGAAGACATTTTACAAACAA-TTTTCCTAGCGTGTAAAACTTCCAAAAGATTccttttaatgtttcatttgaaTACTTCTTGATGAAATAATATTGCA----TATTCACTTCTT--TAAAGAGATGTCAGAGGTTGAAGGTCAAAGGTCAAGTTGAgag-aaaaaaggattaaaataaaagtaagtaatGGCATAAGATGGAGATGATGGAATGCATGTGATTTAAATGTCTACAAACTCCAAACAGAAGTTAATTTCTGAAGCAGTTCCCTTCCAGTGTCTTTTGGAGCCTGCCCACTTCAACA--------TAC---CTTgtctaataaaaatgttttaactctGAGGAATGGAGAACTTCTAATGGTACGTCCATTTGGtctatt----aatgaatgaatgaatgctaaaTTAGTACACCTCAAGGTTAAGCCAATTTTGCTGTCAGAAAAGGACATACAAAGGCGGCtcctttcctttatattttaacTAAGTAGCAGCCAACAAGCTTCTCTGCTGCTAC--CTAT-TCCTCcgta------agaatac----------------aaaaaaaaaatctgtcatattGACA-TATCTGGCAgagaaaagat---gaagag---aaatgTCACATTTTTGATG--AGGAAGTCCTTGGTACAACTGACTGAGGAAAGACCACtctttataaaa---------------atttacattttaggcTGACACTGAGAAACCCCTAAAAACAAAACCTGCCATCTTCActcctttt-ccccattcagtagcAAAGGATTTATTTGTTGCTATGGAATCATTCCACTGCATGAGACACCCTCCATaaaaaaaTCAAACGGTGAAGGATGCTCAGCTACAGTCGTCGTTTTACCATCATTCAGAAGCCAACTGCAG-TTAATTCTTCCtacttctccctttctcccttgaTTCAATTGGACTTGGTTCATCTTAGAATTAACCTCTTTTAATCCGTTTCCTACAAAGAAAGCAAATCCATTGTGGGTAACT-AGCTCTGCTGCTCACCACCCAGGCAGTGAAACCAAAGGGGAGGACACATGTGACAGCCTCCGCCCCAACACGGGGTGGTGATAAGG-GG-TGAACACAGCAGATGCAGGCTTGTACTACAATCTCGAGCTCCTCTTTTGGTTCTCTGCAGTAATGTTAATCCATATTCGTGCGCTGCTGAGTGAACTTCATGCCAACACACTGCTAGTAAACACAAGACAGTTCTGGCTACTGTCTTAAGCCATTACCATGAGGGCTTAAGGTGGCCAAAATGAAGACTTATATAATGAATTGACAGTTTGTTACATTCTGATGATGgtatattttgg-tttttgtcatCTAATCTGTCAATttgcaaatattcattgaatgtcTACTCTGTGACACGGCAACATCCCAGAAGTTATGAGAGGGCCATGGTATTCTT----------TTTTGGTCCAACTGcttattttagaaacatattgATTTTGGAATCTAATGCTTACCCTGGATAGGCGGGGATGGCTGTTGGAGGTACCGCTCGGACTGCACCATATACTGTCCGCCCTCTGCCCCTCAAATGGGCTCCTCTGAAAGCGGCTGCCGTGGTGGCTGCAGTAGGGTAAGGGAAGCCAGGAACTAAAGGGAGACCCAAAATATGACAGAAATTTCAACTTGCATTC------AATAGAGGGTACATAGTCACAACTTGCTATGAACCAATgatagaaaagatgaaaagatacaAACCACATGTTTTTTGAAAAGGTGGCATGCATTCAATAAACCTTCT-ACCCTGGGTCTCTCAGtggggaagaaatggaaagagagacCCCACATG--CAAAAGCAAAAGATTCCATGCCTCA----TTCATCA-CAAATCTTGAGTGAGCTTTCTCTGTTCCTTCTCAATTTCGGC-TTTACAATGCAAGCTGCTGAGAAACAGGTCAAGAAGCTCTGAGAATGACTGCCATCATAAGAGGCA---------AATTACTGTGGGCAGTCTAAATCAGATTGACAT-AAACTCTTCAACCGGTCAG---TTATTAACCCTGCTTCCAAATGTTACTATGTGCACATAATAATTATTACTC-AAAAGAACATTCTTTTGAGATTTTTACATGGTACCAACCTCCAAGGTACATAATAGTCTTTAGA-----CATTTCATTagtcaatttcattctttta i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18523218 6178 + 33263144 AAGTAGGCAAGTCTTAATAAGACAGAAATAGATTGTATTTAAGAAAAAAAAAAAAATCTCCAAATAAGAAACACGTTAGAG----AAAAAAAC--------TTGATTTA-----AGAAATAATCCAAATGGAAAATCTT-------------GCTCTAATAGATCAGATTTCAAGAAAACAAGTTAAATA---AC--AAAGATGAGTTTCATGAGAATATGAACACTAATGTATATGGGAG-ATGTACATGCGACCATCATATTTAAGTATGTGTATTTAGAAATGTGTAATCTG--GTGTA----AAAGTAGGATAGATTC-CCCAGTTCTCAAGCTTCATTGTGAACATAGGAAAAAAGATATCTTTCATTACTTGCTGAAAATATTTTGAGGAAAGAGGTGGATTTTAACTAAAGTTCAAAGAGAGGCAGTGAAATATGGAC-TGGTtgggttttatgcctgactgtattaataatttatgtagttctgggtaagtc----tctgagaaatatatctat-------aatttaggaggttggaccaaa---tcatggctaaggttccttcaagTAGTTATTAAATTAAGGCATACCTTACAGGCCTACTCTAAGTAGTATGCGT-G-----AGTCACCTG---TACCTCGAAGAACTGTATTATCTCATCTCTACTTCCTGCAAAACACAAAACCTCTGAGTGCATTCTGAAAGTGCATTAACTTTTTTAGGTTGCTTGAGAATCTCTGGTAGA---CTGTGCAAA-----CAGTTCACTAAAAAGG--TCCTCTTATTGATTTTGGAAAGTAAGGGTGGAGAAAGCATTTCTAGACAA-TTTTAACCAATCCCCACAGAATCATTTCATGCTGACAAGTTTTTCTTATAAAAAATTTTCCCTTGATGACTTGAGTGACTAAATCAAGCTTGCATTCAGAAAAAGTCCATCTGGAGAGGTCATAATAAAATACTTCAAAACTCAAAAATTTCTAG---TTTGTCAATTATATCACTTTGTCCACATTTTAAATA-ATACGTGACAAACCAAT-------CACGGAACTTTAGTGATAGCT---AGACAGTTTAAATAATGGAGTAC-------ATATTAATATGGCTAGTAGAATCAGCAAATCTTCTATGATAGTCAAATGGCTGTAAGAAGAGTCTGGGTTGCTGATTATGCTACTCATTTCCCCC--AA--TGGCTCTTAAT---------------------------------------------AACTAAATATCTGGAGTTTTCTCATTACTACACACTCTTTGCTGGC--------------ATCGGTTCCTTATTTGGCTACCACAAGGTCATATTCTCTC-AAATTATGTAAAATAGGAAAATGATACAGTTCAGAAAGCTTATTAATCTCTACATAAATCACAGCTCTAATGATCTAAAGAGGGATGTGAAATGAGAAGAAAAGCAGAAAAGGGAAAGAGCTGGTTTAAGGCTAAGCTG---GTCCTGTTATTTATGTATGCAAATGACACGACAATCGTAAAAGACTTTAAACCTGCTGATCATCTCACAAGTAAATTAATGATCCACAGAACATCTGT-GGGT----ATAGGGAAGGGAAAAGAATATGTCCAGTAGACTGACCCTTGCAATGATCAGGAAACCCAAAGGCTTAGTTTTTGCACCCAGGGGCAAGCGCAGTGGCAGAGAAGCATGCTTGCATTCTtaaatatataa--atatatatatatatatatCCACAAGGaaaaa-gaaaatacaaattaaa-taaatt---------------------------aaaaggaaa--------------aaaaccaaaccaaaccaaagaaacag-aaaaaaaaGGCTGGCTTGTCAGGGGATGGGGTCGAGAAGGCCCCAGTGTGTGTACTTACATAGAGGTCAGCACCGTAAAATCCGTCCTGGTAAACCACACTGCAGAAAATCCACACaaaaacaaaaac-aaaaaaaacaaaagaacagaaaCACATTCCGGTTATTGAGGACGGCAGCATGCACATGCGCTCTACACAGGCAGGTGATGTATGAATACATAACCTGGGCTTGGGGCCTCGGCAAGTTGGTGAG-A-AAATGTGAAAGTGCACACGAAGGTTACACAGCTCCGGGACATGCGAGGAGAGGGAAAGGTGTGCAAAACTGGAATGCGCAACCTGGATATTCGGTAATTAAAGTAGGATTCACACAATAAAAAGCACTCCTGGAAGAGCCTATTTTATCTATCCAAAATCTGCTGGCTT--GGAAACA--ACTTTTTGTATATGGAGT-----------ATT------------TTAAAAAATCAGCTTGCCCTAGGAGGAAGTTTC------------TTTTTAAAGAGCTTACAAAATAGGGTGGCGGGGTGAAGAGGAGTTTAA--CATG---A-AAAACTGAACCCAAAGAATTCCACTGGGGCAGGGCCTGTATGCAAAGTACGTTTTTAAATTACGTTTAAGTATTTTGTTTTCAGTATTGTAATAATACGTAAATGTTTTTCTGATATCCATACATCACCTGC-TTTTTACCCTGCACATTAGACATGCGATAAGATTTGGCTGATCACACAAGCATGCAAAGTATTATTATTCAGCA-TTTTAAGAACCAATGCAACACCTCAGAAAAACAAGTCAATCAATTCTGACCAAAGTAAACAGAGAAATGTAATT---AAAAAAAA--------AAAAACACAACCAAAAATACCCACAATGCATTGCTTTCACAAGCAGAGATAATGAGCTAAAGGTTAAGGTGATTGGTCCAAGGTCCAAGAATTGAAAGGTGCAGTGGGGATCCCAGATAGTAACAATATAATCCAGAGTGGGAAGGAGTAACTGGAAGATTTTAAGGGTTCTTTTTTGACCATAAGAGTATTCATGGAATTCTGAAAACTACAATTGATAACTGAAGTTCTGGGCTTGACCAAAGATCGCCCTGTCTTAT---TTAAAAGAATAAAACTGAGAAGGTAGCTGGTTAAG------AATAGAA-GGTTTATTTTCCTGTTTAG-ATAATGAATTTGTAGCAAACAGACAATGCATGACTTT---TTCTT-------------------------AAAAAAAAAA-----------AAAACCTAAACAACACTATATTCTT-------AAATACAGA----TTTCCAACCTTTTGAGGTACTTTTGTGC----------ATACAGACTTCCCCAAAAACATTATTTTGGGACCAAAAGACATGGAATAGCAGTAGAGATAAAAGATAAAACTTTCTTCTTCATCTCTGTTAAGTCAAGATCAGATTGTTTTA---ATTTACA-TGATCTGCTTATTGGTTATTCAACTAAA-AAGCTGGAAATTTTCACCACTACCTTCTCTGTT-ACAATGAACAAGCTGACAAGTAAAGTCACCAAATCATATTTTTAACTTGAATATGAAATAACTTGTTTCTTACAGGTAGGTGTAATGTTTCTTAATTCTATTTCCAATGAATGACATTTGGTTGTATTTACAGGATAGTATAGTCACATTTTGGAATGCCCCAAATATGCTATGCCCTTGTATCACACAACAGGCAAATCAAACTCATCTCTAATGCTCATTTAGCTAA---GTCCCATTCATTTTCATAGTCTCCAGTTGCAGTTAAAGTCTGA-TATTAGAACGTAATCTGCCTCTCAATTGCAATTTAGTGAAAAAAACAACTTGTTCAAAATGAGAAGGCTGATAAAATGGAAAGCACTGAGGCCAAGTGGTGATTAATTAAACTTCAAAGATCTTAGTAAGGGAATATAGGTAAAGATTTACAAACAAGCCTTCTATAAAGAAGGGT--TGGCATTAAAAACACAAATACATTTTACCTTAAGTCAAA-TAACTTATTGGGAATATTCATCTACATTCTAGAAGAATTCCAATATTCCCCATATCAAATGCCACAAGGAGGCTAG-AACATAATGATTAATGATGAAATTAGTTTACTAAGCTGAAAAGCAATTCTAGGCCATT-CCCATGAAATACTGGACTTATTCCTTGCCATCTTCCATGTAAACAGGTGGTTTAGTTAAT-AAAAAGAAAACATGGGAAATCAGTGTTCAATGTAATGCACAGAAATTGATATGATTAGACATAAAGATTAAAATATCTTTGAGCAAATATATA---------------CCTGACACAGACTTGGTAGAGAATGGGTTCTCAAGTTTGGCCAATATACTGAAATGA-CTACATTGAACAGGACTAAATTCAACCA-CTTTATAAAGTAATTCAGCAATGTTACAAAATAAGGAAGTCCCATGTTTCT-GGTGAGTAGTCT--CTCTTTGCAAACATGACAGTAAACTCTCTTGGATTACAATGGAAGACATTTTACAAACAA-TTTTCCTAGCGTGTAAAACTTCCAAAAGATTCCTTTTAATGTTTCATTTGAATACTTCTTGATGAAATAATACTGCA----TATTCACTTCTT--TAAAGAGATGTCAGAGGTTGAAGGTCAAAGGTCAAGTTGAGAG--AAAAAGGATTAAAATAA----AAGTAATGGCATAAGATGGAGATGATGGAATGCATGTGATTTAAATGTCTACAAACTCCAAACAGAAGTTAATTTCTGAAGCAGTTCCCTTCCAGTGTCTTTTGGAGCCTGCCCACTTCAACA--------TAC---CTTGTCTAATAAAAATGTTTTAACTCTGAGGAATGGAGAACTTCTAATGGTACGTCCATTTGGTCTattaatgaatgaatgaatgaatgCTAAATTAGTACACCTCAAGGTTAAGCCAATTTTGCTGTCAGAAAAGGACATACAAAGGCGGCTCCTTTCCTTTATATTTTAACTAAGTAGCAGCCAACAAGCTTCTCTGCTGCTAT--CTAT-TCCTCCGTA------AGAATAC-----------------AAAAAAAAATCTGTCATATTGACA-TATCTGGCAGAGAAAAGAT---GAAGAG---AAATGTCACATCTTTGATG--AGGAAGTCCTTGGTACAACTGACTGATGAAAGACCACTCTTTATAAAA---------------ATTTACATTTTAGGCTGACACTGAGAAACCCCTAAAAACAAAACCTGCCGTCTTCACTCCTTTT-CCCCATTCAGTAGCAAAGGATTTATTTGTTGCTATGGAATCATTCCACTGCATGAGACACCCTCCAT-AAAAAATCAAACGGTGAAGGATGCTCAGCTACAGTCGTTGTTTTACCATCATTCAGAAGCCAACTGCAG-TTAATTCTTCCTACTTCTCCCTTTCTCCCTTGATTCAATTGGACTTGGTTCATCTTAGAATTAACCTCTTTTAATCCGTTTCCTACAAAGAAAGCAAATCCATTGTGGGTAACT-AGCTCTGCTGCTCACCACCCAGGCAGTGAAACCAAAGGGGAGGACACATGTGACAGCCTCCGCCCCAACACGGGGTGGTGATAAGG-GG-TGAACACAGCAGATGCAGGCTTGTACTACAATCTCGAGCTCCTCTTTTGGTTCTCTGCAGTAATGTTAATCCATATTCGTGCGCTGCTGAGTGAACTTCATGCCAACACACTGCTAGTAAACACAAGACAGTTCTGGCTACTGTCTTAAGCCATTACCATGAGGGCTTAAGGTGGCCAAAATGAAGACTTATATAATGAATTGACAGTTTGTTACATTCTGATGATGGTATATTTTGGTTTTTTGTCATCTAATCTGTCAATTTGcaaatattcattgaatgtctactctgtgacacggcaacatcccagaagttATGAGAGGGCCATGGTATTCTT----------TTTTGGTCCAACTGCTTATTTTAGAAACATATTGATTTTGGAATCTAATGCTTACCCTGGATAGGCGGGGATGGCTGTTGGAGGTACCGCTCGGACTGCACCATATACTGTCCGCCCTCTGCCCCTCAAATGGGCTCCTCTGAAAGCGGCTGCCGTGGTGGCTGCAGTAGGGTAAGGGAAGCCAGGAACTAAAGGGAGACCCAAAATATGACAGAAATTTCAACTTGCATTC------AATAGAGGGTACATAGTCACAACTTGCTATGAACCAATGATAGAAAAGATGAAAAGATACAAACCACATCTTTTTTGAAAAGGTGGCATGCATTCAATAAACCTTCT-ACCCTGGGTCTCTCAGTGGGGAAGAAATGGAAAGAGAGACCCCACATG--CAAAAGCAAAAGATTCCATGCCTCA----TTCATCA-CAAATCTTGAGTGAGCTTTCTCTGTTCCTTCTCAATTTCGGC-TTTACAATGCAAGCTGCTGAGAAACAGGTC---AAGCTCTGAGAATGACTGCCATCATAAGAGACA-GAC-TTTTAATTACTGTGGGCAGTCTAAATCAGATTGACATAAAACTCTTCAACCGGTCAG---TTATTAACCCTGCTTCCAAATGTTACTATGTGCACATAATAATTATTACGC-AAAAGTACATTCTTTTGAGATTTTTACATGGTACCAACCTCCAAGGTACATAATAGTCTTTAGAcatttcatttcattagtcaatttcattctttta i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198227451 6137 + 210400635 AAGTAGGCAAGTCTTAATAAAATATAAACAGGTTGTATTTAAG------AAAAAAATATCCAAATAAGAAAGATATTAGAG----AAAAAAAT--------TTGATTTA-----AGAAATAATTCAAATGGAAAATCTT-------------GCTCTAATAGACCAGATTTCAAGAAAACAAGTTAAATA---ACATAAAGATGAGTTTCATGAGAATATGGACACTAATGTACATGGGAGAATGTACATGCTAACATTGTATGTAAGTATGTGTATTTAGAAATGTATAATCTG--GTATA----GAAGCAGGATAGATTC-CCCAGTTCTCAAGCTTCACTGTGAATGTAGGAAAAAAGGTATCTTTCATTACTTGTTGAAAATATTCTGAGGAAAGAGGTGGATTTTAATTAAAGTACAAGGAGAGGTAATGAAATATGGAT-TAGctgggttttaggcctgactgaattaataatttatgtaattctgggtaagcc----tctgagaaatatatctat-------acat--gaaggttggaccaaa---tcatggctaaggttccttcaagTAGTTATTAAATTAAGGC---CTTTATAGGCCTACACTAAGTAGTATGGGT-A-----AGTCACCTG---TACCTCGAAGAACTGTATTATTCCATCTCTACTTCCTACAAAAAATAAAACCTCTGAGTACATTCTGCAAGTACATTAACTTTTTTAGGTTGTGTGAGAATCTCTGGTAGA---CTGTGAAAA-----CAGTTCACTAAAAAGG--TTCTCTTACTGATTTTGGAAAGTAAGGGTGGAGAAAGCATTTCTAGACAA-TTTTAACCTATCCCCACAGAATCATTTCATGCTGATAAGTTTTTCTTAT-AAAAATTCTTTCCTGATGACTTAAGTGGTTAGATCAAGCTTGCATTCAGAAAAAGTCCACCTGAAGAGGTCATAATAAAAGACTTTAAGACTCAAAAACTTCAAC---TTTGTCAATT-----ACTTTGTCCACATTTCAAATA-ACATGTGACAAA-CAAT-------CATGGAACTTTAATAATAGCT---AGACAGTTTAAA-------------------------TACGGCTAGTAGAATCAGCAAA---TC---GATAGTCAAATGGCTGTAAGAAGAGTCTGGGTTGCTGATTATGCTACTCATTTCCCCC--AG--TGGCTCTTAAG---------------------------------------------AACTAAATG---GGCATTTTCTCATTACTATACACTCTTCGCTGGC--------------ATCGGTTCCTTATTTCACTATCACAAGGACATGTTCTCTC-AAAGTATGTAAAAGAGGAAAATG-TACAGATCAGAAAGCTTATTAACCTCTACATAAATCAAAGCTCTAATGATCTAAAGAGCGATGTGAAATGAGAAGAAAAGCAGAAAAGGGAAAGAGCTGGTTTAAGGCTAAGCTA---GTCCTGTTATTTATGTATGCAAATGACACGACAATAATAAAAGACTTTAAACCTGCTGATCATCTCACAAGTAAATTAATGATCCACAGAACATCTGTGGGGT----ATACGGAAGGGAAAAGAATATGTCCAGTAGACTGACACTAGCAATGATCAGGAAACCCAAAGGCTTAGTTTTTGCACCCAGGGGCAAGCGCAGTGGCAGAGAAGCATGCTTGCATTCttaaatatataa--atatttatatatatatatCCACaaggaaaaa-gaaaattaaaattaaa-taaatt---------------------------aaaagg-aa--------------aaaataaaaccaaaccaaagaaacag-aaaaaaaaGGCTGGCTTGTCAGGGGATGGGGTCGAGAAGGCCCCAGTGTGTGTACTTACATAGAGGTCAGCACCGTAAAATCCGTCCTGGTAAACCACACTGCAGAAAATCCACacaaaaacaaaaacaaaaaaaaacaaaagaacagaaacaCATTCCGGTTATTGAGGACGGCAGCATGCACATGCGCTCTACACAGGCAGGTGATGTATGAATACATAACCCGGGCTTGGGGCCTCAGCAAGTCAGTGAGAA-AAATGTGAAAGTGCACACAAATGTTACACAGCTCCAGGACATGCGAGGAGAGGGAAAGGTGTGCAAAACTGGAATGTGCAATCCAGATATTCAGTAATTAAAGTAAGACTAACACAGTAAAAAACACTCCTAAAAGAGCCTATTATACCTATCTAAAATCTGCTGGCTT--GGAAACA--ACTTTTTGTATGAGGAGt-----------atttttttttttttatttaaaa---aGCTTGCCCTAGGAGGAAGTTTC------------CTTTTAAAGAGCTTACAAAGTAGGGTA--GGGATGAAGAGGGATTTAA--CATG--AA-AAAACTGAACCCAAAGAATTCTACTAGGGCAGGGCCTGTATGCAAAGTATGTTTTAAAATTATGTTTAAGTATTTTGTTTTCAGTATTGTAATAATATGTAAATGTTTTTCTGATATCCATACATCACCTGC-TTTTTACCCTGCACATTAGACATGCGATAAGATTTGGCTGATCACACAAGCATGCAAAGTATTATTATTCAGCA-TTTTAAGAACCAATGCAACACCTCAGAAAAACAAGTCAATCAATTCTGACCAAAGTAAACAGAGAAATGtaattaaaaaaaaaaa--------aaaaaCACAACCAAAAATACCCACAATGCATTGCTTTCACAAGCAGAGATAATGAGCTAAAGGTTAAGGTGATTGGTCCAAGGTCCAAGAATTGAAAGGTGCAGTGGGGATCCCAGATAGTAACAATATAATCCAGAGTGGGAAGGAGTAACTGGAAGATTTTAAGGGTTCTTTTTTGACTGTAAGAGTATTCATGGAATTCTGAAAAATACAATTGATAACTGAAGTTCTGGGCTTGACCAAAGAGCATCCTGTCTTAT---TTAAAATAATAAAACTGAGAAGGTAGCTGGTTAAG------AATAGAAGGGTTTATTTTCCTGTTTAG-AGAATGAATTTGTAGCAAACAGACAATCCATGGCTTA---------------------------------AAAAAAAAAAAAAACAACAAAAAAACCTAAGCAACACTATATTCTT-------AAACATAGA----TTTCCAAACTTTTGAGGTATTTTTGTGC----------ACACAGACTTTCCCCAAAACATTATTTTGGGACCAAAAGACATGGAATAGCAGTAGAGATAAAAGATAAAACTTTCTTCTTCACATTTGTTAAGTCAAGATCAGGTTGTTTTA---ATTTAGA-CAATCTGTTCATTGATTATTCAACTAAAGAAGCTGGAAATTTTCACTCCTACCTTCTCGGTT-ACAATAAACAAGCTGGCAAGTAAAGTCATCAAATCATATTTTTAAGTTGAATGTAAAATAACTTGTTTCTTATAGGTAACTAGAATGTTTCTTAATTCTATTTCC----AGTGACATTTGGTTATATTTTCAGGATAGTGTGGTCATATTTTGGAATGCCCCAAATATGCTATGCCCTTGTATCACACAACAGGCAAATCAGACTCATCTCTGATGTTTATTTAACTAA---GTCCCTTCCATTTTCATAGTTTCCAGCTGCAGTTAAAGTCTGA-TATTAGAAAGTAATCTGCCTCCTAATTGCATTTTAGTGAAAAAAA-GGCTTGTTCAAAATGAGAAGGCTGATAAAATAGAAAGCATTGAGACCAAGTGGTGATTAATTACACTTCAAAGATCTTAGTAAGGGGATACAGGCAAAGATTTACAAACATGCCTTCTATAAAGAAGTGC--TGGCATTAAAAACACGAATACA-TGTATCCTAAGTCAAA-TCACTTACTGGGAATATTCATCTAAATTCTAGAAGAATTCCAATATTCCCTGTATCAAATGCCACAAGGAGGCTAG-AACATAAGGATTAATGACGAAGTTAGTTTACTAAGCTGAAAAGCAATTCTAGGCCGTT-CCCATGAAATACTGGACTTATTCCTTGCCATCTTCCATGTAAACA-GTGCTTTAGTTAAT-AAAAAGAAAACATGGGAAATTAGTGTTCAATGTAATGCACAGAAGTTGACATGATTAGACATAAAGA-GAAAATGTCTTTGAGTAAATATATA---------------TCTGACACAGACTTGGTAGATAATGGGTTCTCAAGTTTGGCCAATATACTGAAATGA-CTGTATTGAACAGGACTTAATTCAACCA-CTTTATAAAGTAATTCAGCAATGTTCCAAAATAA-GAAGTCCCATATTTCT-GGTGAGTAGACT--CTCTGTGCAAATATGACAATAAACTCTCTTGGATTACCATGGAAGACATTTCACAAACAA-TTTTCCTAGTGTGTAAAGCTTCCAAAAG-CTCGGTTTAATGTTTCATTTGAATATTTCTTAATAAAATAATATTGCA----TATTCACTTCTT--TAAAGAGATGTCAGAGGTTGAAGGTCAAAGGTCAAGTTGAGAG-AAAAAAGGATTAAAATAAAAGTAAGTAATGGCATAAGATGGAGATGATGGAATGCATGTGATTTAAATGTCTACAAACTCTAAACAGAAGTTAATTTCTGAAGCAGTTCCCTTCCAGTGTCTTTTGGAGCCTGCCTACTTCAACA--------TAC---CTTGTCTAATAAAAATGTTTAAACTCTGTGGAACAGAGAACTTCTAATGGTACATCCATTTGGTCTATT----AATCAATGAATGAGTGCTAAATTAGTACATCTCAAGGCTAAGCCAATTTTGCTGTCAGAAAAGGACATACAAAGGAGGCTCCTTCCCTTTATATTTTAACCAAGTAGCAGCCAATAAACTTCTCTGCAGCTAC--TTAT-TCCTCCACA------AGAATACaaaa--aaaaaaaaaaaaaaaaaaaaTCTGTCATA------------GGCAGAGAAAAGAT---AAAGAG---AAATGTCACATCTTTGATG--AAGAAGTTCTTGGTACAACTGACTTCTGAAAGACCACTCTTCATAAAA---------------ATTTACATTTTAGGCTGACACTGAGAAACCACTAAAAACAGAACCTGCCATCTTCACTCCTTTT-CCCCATCCAGTAACAAAGGATTTATTTGTTGCTATGGAATCATTCCACTGCATGAGACACCCTCCATAAAAAAATCAAATGGTGAAGGATGCTCAGCTACAGTCGTCGTTTTACCATCATTCAGAAGCCAACTGCAGTTTAACTCTTCCTACTTCTCCCTCTCTCCCTTGATTCAATTGGACTTGGTTCATCTTAGAATTAACCTCTTTTAATCCGTTTCCTACAAAGAAAGCAAATCCATTGTGGGTAACT-AGTTCTGCTGCTCACCACCCAGGCAGTGAAACCAAAGGGGAGGACACATGTGACAGCCTCCGCCCCAACATGGGGTGGTAATAAGGGGG-TGAACACAGCAGATGCAGGCTTGTACTACAATCTTGAGCTCCTCTTTTGGTTCTCTGCAGTAATGTTAATCCATATTCGTGCGCTGCTGAGTGAACTTCATGCCAACACACTGCTAGTAAACACAAGACGGTTCTGGCTACGGTCTTAAGCCATTAACATGAGGGCTTAAGGTGGCCAAAATGAAGACTTATATAATGAATTGACATTTTGTTACATTCAGATGATGGTATATTTTGG-TTCTTGTCATCTAATCTGTTAATTTGCAAATA--CACTAAATGTCTACTATGTAACACGGCAACATCCCAGAAGTTATGAGAGGGCCATGGTATTCTT----------TTTTGGTTCAACTGTTTATTTTAGAAACATACTGATTTTGGAATCTAATGCTTACCCTGGATAGGCGGGGATGGCTGTTGGAGGCACCGCTCGGACTGCACCATATACTGTCCGCCCTCTGCCCCTCAAATGGGCTCCTCTGAAAGCGGCTGCCGTGGTGGCTGCAGTAGGGTAAGGGAAGCCAGGAACTAAAGGGAGACCCAAAATATGACAGAAATTTCAACTTGCATTCCTATTGAATACAGGATATACAGTCACAACTTTCTATGAACCAATTATAGA--------AAAGATATGAACCACATCTTTCTTGAAAAGGTGGCATGCATTCAATAAACCTCCT-ACCCTGGGTCTCTCAGTGGGCAAGAAATGGAAAGAGAGACCCAACATG--CAAAAGCAAAAGATTCCATGCCTCA----TTCATCA-CAAATCTTGAGTGAGCGTTCTCTGTT-CTTCTCAATTTCGGC-TTTACAAGGCAAG----TGAGAAACAGGTC---------TGGGAATGACTGCCATAACAAGAGAC------TTTTAATTACTGTGGGCAGTCTAAATCAGATTGACAT-AAACTCTTCAACCGGTCAGTTATTATTAACCTTGCTTCCAAACGTTAGTATGTGCACATAATAATTATTACTCAAAAAGAACATTATTTTTTTATTTTTACATGGCAACAACCTCCAAGGCACACAATAGTCTTTAGACATTTCATTTCATTAGTCAATTTCATTCTTTTA i calJac3.chr1 C 0 C 0 s mm10.chr15 77092852 5706 + 104043685 AAGCAGGCAAA----ACCAGGATAGAAGCAGGATATGTTTAAA----AAAAAAAAATCC-CAAATAAGGAAGATATTACAT----AAAAAAAC--------AACAACTACAAAGACAAAAAACCCTAAGCCCAAACCTCAGTTGGGGAAATAACTCAACTATAGTAGATTCCAAAAACATAAATAATCTGTTTAT--GAAAATGGGTTTCATGAGAATATAGA-----------------------------GAACATCATATGTAAATATACACATCCACAAATGTGTAATGTGCAATGTGCTGTAAGGTAAGCCAGATTTGCCCAGTTTTCA------ACTGTGAACACAGGAGGAAAAG---------TTACTTCTTAAAAATTTGCTAAAGCAAGAGTTAGATTTTAATTAAAGTATAAAGAAAGGCAATGAGACATGGGCATGG--GGTCTTCATGCTTGGCTGTGTAAACTATTTCTGAAATTCTAGT--AGTC--------------ACATCTA---------------AGGGATGGGCCAAGGATCCCTACCTGTGGTTCTTTTACAAGGT----------AGACACACTCTGAAGACCTACTCTAGATAGCACAGCTAG-----CCTCACCTG----GCCTGAGAAAGCGGCGT---------------------------CAGTGTCTCTGAATGGA--CTGACA--------------TCATACTGCTGAGGAA--------------------------------------------------------------GGAGAGGAGAGGGCAAGAAAGCGCCTCCTGAACA-CACTGACCCA---CCTCAGAGTAACTTCCCACTGCTAAGTCTTCCTTAC-AGAA---TTGCCTTAATGATTTGGGTCAGTTGACTATGCTGACATTCAGAGAAAGGCCATTTGGAAGGCACCTAATGATAGACCTTGAGACTCAAAAGCTTTTCC---CATGTCAGCTAGATTCCTTTG----------AAGTAGGTATGTGACCAACAAATCATGGAACATGGAACTTCATCTCCAGCT---AGAAGG-----ACAATGGGTTTA-------ATGTCAATGTGCC-------------------TGCATGATAACTGAGCGTC-------AGAGTCCAGGCTGCTACTTACACTCTCCGGTTTCCCT--GGCTTGACTCCTAAGAAGGAGACACACTGGCTGTGGACTTCCAGGTAGA-------CCGAAACTGAGTCTCTGTGACCCTC-AAATGCTCTACACTTCTCTATAACTACTATACCATGAGACCAGCTACTGACATCACTTGCACAAATTTATGCTCT-TC-ACGTCATGTGAAGTTAGCA-----CACAGTTCAGAAAACTTCCTGGCATT-ACATAAA-CAAAGCCCTGACCCTTTAAAGACGG-TGTAAGATGGAGAGAAAAGCAGAGACAGGAAAGAGCTGGTGTCAGG-TAAGCTA---GTCCTGTCATTTATGTATGCAGATGATGCGACAA---CATACGACTTTAAAGCTGCTGATCATCTCACAGG---GTAAGAGATGCCCAGAGCACTCGT-GGGTGGGCACAGGCAAGGG--GAGAATATGTCCAGCAGACTGGCCC-AGCAACCATCACAAGACCCAAAGACTTAGTTTTTGCACCCAGGGGCAAGCGCAGTGGCAGAGAAGCATGCTTGCATTCTTAAA-atatat--aaatatatatatatatatCCACAAGGAAAAAGGAAAACAAAAGttaaattatatt---ttta-------------------aaaaaGGAAACAaaaaataaaaataaaaataaaaCAAACTAAAGAAACAG-AAAAAAAAGGCTGGCTTGTCAGGGGTTGGGGTCAAAAAGGCCCCAGTGTGTGTACTTACATAGAGGTCAGCACCGTAAAATCCGTCCTGGTAAACCACACTGCAG-AAATCCACacaaaaacaaaaac---aaaaaacaaaagaacagaaacaCATTCCGGTTATTGAGGACGGCAGCATGCACATGCG--CTACACGGGCAGGTGATGTATGAAT--GTGACCTGGACACGGGACCGCGGCAAGCTGGTGAC-A-GAG-----------ATGTATATGTTCCATGGCTCCAGGACATGTGAGGAGGGCTAAGGGTCTGCAAAACTAGACGAAGC-ACCTGGACCCTGGATACCGCA-----GACTAGTGACAGAAGCCGAGCTCCTGGCAGGGCCGCAGGTAGCTGCCTGAGATCTGCTGGGTTACACAGACC--ACCTTTAGCATCTGGAGT-----------CCT------------TTTAAACATTTGC------------------TA------------TTCTTTAACAGCGTACAA---AGGGTA--GGGATGGCGAGGGCTTCACTTCAGG---AGGAGAGTGAACAAGGTGAATTCCATTAGGACAGGAGCTATTTGCTAAGTGTGTTTC-AAATGATGCTT-AGTA-GTTATTTTCATTTTTCAAAT----TATAGATTTTTTCCTGTTATCCATACATCACCTGC-TTTTTACCCTGCACATTAGACATGCGATAAGATTTGGCTGATCACACAAGCATGCAAAGTATTATTATTCAGCATTTTTAAGAACCAATGCAACACCTTGGAAAAACAAGTCAATCAATTCTGACCAAAGTAAACAGAGAAATGTAATT----AAAAAAAACCAAAAGAACAAAACAACCAAAAATACCCACAATGCATTGCTTTCACAAGCAGAGGTAATGAGCTCAAGGTTAAGGTGATTGGTCCAAGG-------ATTGAAAGGTGCAGT-GGGATCCCAGATAGTAACAACATAATCCAGAGTGGGAAGGAGCAACTGGAAGATTTTAAGGGTTCTTGCCTAACT----GAGTATTCAAAGAATTCTGAAACATACAATTGGTGACTCAAGCTTTGGTCATGACTAGG------CCTGTCCT----------------------TGACGGTGACC--TTAAGGAAGCCAATGGCATGGCTCACTCTCCTGTCTGG-GAATGGGCTTTGC--CAAGCAGGCACTAT-TAGTTTT---TTTTT-------------------------AAACAAA--------------AAAACTGGAGTAGTAGTATACTATTATTCTTAAAATGCTGACTTTTCTCCAGCCTTATGAAGTG--TGCATAT----------GTACATATTTTCCCCCAAGTATTATTTTGGGAGTAAAAGACAT-TAACAGTGGCAGAGAGAAAAGACTAACTTTT----TTCACATTTGTCAGGTCAAGACTTGGCTGTTTTACATATTTCTAAAAATCTGTT--TTGGTTTATTAGCAAAATAAAATGGATAATTT--------CTTTTTTCATT-ATAATGAATGAGCTAACAAGTAGGGCTGCTAAGTCTTATATCTAAG-----------------------------------------------------AGTTGC----AA------------------------------GGTCACACCTTACAATGCACCTAACA--CTAGACCTCTGTTTTGTGCAGCCGGAGAAGCAGATGAACTTCTGGTGTC--TGTAGGCAG---GCTTTACCTGCGT---TAGTCTCCACGTACTTAGAGAGTCTGA-TATTGGGATG-AGTCTGCCTTTCCACTGAATTTTCCTAAAAGACTTGCATAGTT--------GAAGGCTGA-AGAATGG---GCGCAGAGGCTGAGGGG-----AGTTACTCTTCATCAATGTCAGTGCGGG--CACGGGCAAAGA-CTACAACACATCCTTCTACAAAGAC-TGT--TGCCATTAGAAACATGGATATATTTTATTGTAAGTCAAA-TCATTTATTGTGAATATTCA-CTGGATTCTACAAGAGTTCTGATAATCCCTGAACCCAATGT--------GGTAAG-AGCACAGAGGCTCACAAGCGACTCGA-----------GGAGAGAAATTCTAGGCTATTCCCCAGGAAACACTGGACTTATTCCTTGCCATCTTCCATGTAAACAGATGGTTTAGTTATTAAAAAAGAATACACAGGAAATTAGCGTTT-GTGTA-----------CTGATATGATCAGACATAAAAGATAAGATACATTTAAGCAAatatatatatatatatatatTCTCTGACACAGACTTAGGAGAGAATGGG--------------------------------------------------------------TTATGGAATAGTTCAGGAA-GTTACAAAACA-GGAAGTTCCATGTGTCTCTGTGGACTCTCTCCCTCCCTGCGTGCGTGACAGTCAATGCTTCTGGGTGGAAATGGGAGATACCTTGTGAGAAG-ATTTCTTAGTGTGCTAAGCTTGTAAAAGATTCACTTTCATGTTTCAATCAAATATTTCTTAATGAAACA--GCTGTA----TCTTTATTTTTTAAAAAAGAGATGTCAGAGGTTGAAGGTCAAAGGTCAAGTTGAGACAAAAAAAGGATAAAATTAAAAGCAAGTCATGGCAGAAGATGGAGATGATGGAATGCATGGGATTTAATTATCTATAAATTGCAAATGAAAGTTATTTTCTGAAGCAGTTCCCTTGCAGTGTC--TTGGAGTCTGCCCACTTCAGCATGCATACTTGC---CTTGTCTAATAAAAATGCTTTAATTCTGTAGCATGGAGGACTCCTAATGGTATGTCCA-TTGGTCTATG--------AATGAATGAATGTTAAATTAGTATACCTCCTAGTGAAGCCAATTTTGCTATCAGAAAGGGACA-----------CTCTCTTCTGTTAGGTTCTAACTAAAAAGCAACTAATTGGCTTTTCTGCAGCTAT--TTATATTCTTCACAATACAGAAAAAACAAAAACAAAAAACAACAAAAAAACCACCTGTCATA------------GGCAGAGAAAAGATGAAGAAGAG---AAATGTCAACTCT----TG--AGAAAGTTCTTGGTACAACTGACTTAGAGAAGTTCACTTCATATAAAA---------------ACATACG--TCAGGCTGACACAGGTAAACAACTAAAAGCC-AATCTGCCATCTTCCCTCCTTCT-CCCCATTCAAAAACAAAGGATTTGTTTGTTGCTATGGAATCTTTCCACTGCATGAGACACCCTCCACTCCAAACTGAA--GGCGAGGGATGCTCAGATATGCCAGCTG--CTACCACC--TCAGAAGCCAGCCGCAGCTGGA---TCCCTACTTCTCCCTCTCTTCCTTCATTCAATTGGACTTGTTTTGTCTTTGAATTCACGTCTTTCAATCTGTTTCCTACAAAGAAAGCAAATCCATTGTGGGTAACTAAGCTTTGCTGCTCACTACCCAGGCAGTGAA---CATGGGGTGGGCGCATATGCTGGCCTCGGCCCCCGCATGGGGAGGTGAGACA--GG-TGAGCAGAGCAGACACAGTCTGGCACTATGATCTCCAGCTCCCTCCTCACTTCTCTGTAGTAGTGTTAATCCACACTCGTGCGCTGCTGAGTGAACTCCATGCCAACACACTGCTAGCAAACACAAGATGGCTCTGGCCACTGTCTTAAGCTGTCACCACAAAGGCTTAAGGTAGCCAAAATGAGTGTTTATATATTGA--TGACCCTTGGTCAAA--------ATTCTGTATTTTGG-TTCTTGCCCT-TAGTCCATTAATTTGCAAATATTCACACAGCATCTAAATGCTGTCA-AGCAACATCCTAGGAATCA-GGGAGGGCCAGAGCACTCTTTCTTCCCTTCTTTTGTATCCATTACTTATTTTAGAA--ATGGTGATTTTGGAATCTAATGCTTACCCTGGATAGGCGGGGATGGCTGTTGGAGGTACCGCTCGGACTGCACCATACACTGTCCGCCCTCTGCCCCTCAGATGGGCTCCTCGGAAAGCAGCTGCCGTGGTGGCTGCAGTTGGGTAAGGGAAGCCAGGAACTAAAGGGAGACCCAAAATATGACAGAAATTTCAACTGGCATTC------AGAAGCTGGTACAAAGCTAGA-----CTGAGAATCAATTATGGAAAAGGTAG-AAGACAGGCACCGAATGTTCCCTGAAAAGACAGCAAGCAT---ACATGCTAATT-AACACGGGGCTTT---GGGGGAGGGGGTGGGAAGAGAGATACAGGATGACCTAATG---ACGACTCCATGCCCCACTTGTTTGTCA-C-GGTCT----TGAGCTTACCCTGTTTCTTCCAGGTTTTTCCAGTCATTATGAGAACTGATAAGAAACTCTTT-------------------TATCATAGTAAGATGCA-CACGTTTTAATTTCTGTTGCTGATTTAAATCAGGTTAATAT---ATTTTTTAATTGGCCAA---CTATTAATTTCATTTC----TGTTATTATG------TAATAATTATTACTC-AAAAGGAAACT-TCTTTATATTTTTA-ATG--------CTCCAA-GCATACAATAGTTTTTAGA-----GAATTTATTTGT-AATTTAATTTCTTTA i mm10.chr15 C 0 I 185 s canFam3.chr10 40851486 6185 - 69331447 AAGTAGGCAAATCTAAACAAGGTAGAAGTAAATCATACTTAAA-----AAAAAAAATTCCCAAAGAAGA------TTAGAGAGAGAAAAAAACCCGAGCCTTTGACTTA-----AGAAATAATTCCAATGAAAAAGCAT-------------GTTCTAATTGATCAGATTTCAGGGAAACAATTTAAATA---ACATAAAGATGAGTATCAT-AGAATACAGATACTAATGTATGTGGGAGAATGTACATGCTAAGATCATATGCAAATACATATATCTAGAAAAATGTCATTTG--GTATA----AAAGTAAGAATATTTC-CCCAACCCTCAAGTTTTACTGTGACCACAAGAAAAAAGGTATCTTTCATTGCTTCTTGAAAACCATCTGAGCAAAGATGTGGATTTTAATTAAAGCACTGAGAGAGGTAATGAAATATGGAT-TAGCTGAGTTTTGTGCTTGGCTA---TAAAAAATAACATAATCCTGGA-GAGTCACAATCTAAGAAATATATATATATATAGGaagtgagagggttggactaat---tcatggctaggattcctttaagcATTTGTTAAACTAAGGCAAACTTTGCAGGTCTACTCTAAATAGGATAGGT-GTGTCCAGTCACCTATATTATCTCAGAGGACTGCTCTATCTTATCTCTACTTACTGCAACACACACAACCTCTAAGTACATTCTGAAAGTGCATTACAGTTTTCTCAATGCCAGAGAATCTCTAGCAGAAATCTGTGGAAACAGGTCAGGTCACTACAAAGGTATACACTTACTGATTTGGGAAAGTAAGGGTGGAGAAAGCATTTCTGGACAATTTTTAACCTATGCCCAAGAAATAATTGCATGCTGACAAGTTTTTCTTAA-----ATTATTTCTTAATGATTTGTGCAGTTTGACTAAGCTTGTATTCAGAAACAGATCATGTGGAAAGGTCTT-ATCAAAGATTTCAAAGCTCAAAAACTTTTGGATTCTTGTCAGTTAGATCACTTTGTCCACATGTTAAATA----TGTGACAAACCAAT-------CACAGAACTT-------AGCTACAAGACAGTTTTAATAATGGATAATAATAATGATGTTACCATAGTTGGTAGACTCAACAAATCCTGTGTGATCGTCAAATGTTTGTAAGAAGAGTCTAGGTTGCTACTTATGCCACTTGCTTCCCTCCAGA--TGGCTCTTAAG-AAGAGACCCGCCAGCTGTGGACCTTTGGATAAAGCAAGGCCTGAAGCACTGTGTTTGGTTTCCTCTCATTA-TCCCCACTCTTCATGGGC--------------ATCAGCTCCTCCCTTCTCTTTCACAGGGTAATGCTTTCTC-AAAATATGTAAAATAGGAAAA---CATAGTTTAGAAAGCTTACTGCCATCTACATAACTCAAAGCTCCAATGATCTAAAGAGGGATATGAAATGAGAAGAAAAGCAAAAAAGAGAGAGAGCTGGTTTAA-GCTAATATAACTATCCTGTTATTTATGTATGCACATGATACGACAGTAATAAAAGACTTTAAACCTGCTGATCATCTCGCAAATAAATCACTCGTACATAGAACATCTGT-GGGT----ATAGGGAAGGGAAAAGAATATGTCCAGTAGACTGACTCTAGCAATGATCAGGAAACCCAAAGGCTTAGTTTTTGCACCCAGGGTCAAGCGCAGTGGCAGAGAAGCATGCTTGCATTCTTAAatatataa--atatatatatatatatatCCACAAGGAAAAA-GAAAATAAAAATTAAA-CAAATTATATGTAAaaaaacaaaaacaaaaacaaaaacaaaa--------------aaaaacaaaCCAAACCAAAGAAACAG-AAAAAAAAGGCTGGCTTGTCAGGGAATGGGGTCGAGAAGGCCCCGGTATGTGTACTTACATAGAGGTCAGCACCGTAAAATCCGTCCTGGTAAACCACACTGCAGAAAATCCACacaaaaacaaaaac--aaaaaaacaaaagaacagaaacaCATTCCGGTTATTGAGGACGGCAGCATGCACATGCGCTCTACACAGGCAGGTGATGTATGAATACATAACCGGGGCTGGGGGCCACAGCGCGTCAGTGAG-AGAAATGTGAAAGTGCACACGCACGTTACACAGCTCCAGGACATGCGAGGA--GGCAGAGGAGCGCAAAACTGGAGTGAAT-ACCTGGATACTTGGGAATTATAGGAAGACTAAAACCATAAAAAGCGCTCCCAG-AGGGCCTAACAGAACCATTGAAAGGCTGCTGGATT--AGAAACATCAAATTTCCTACCCGGAGTTGTTTGTTTTGTTT------------TTTAAAAA--AGCTTGCCCTAGGAATAAATTTCAAAATGACTGCATGTGTATGGGGGGTGGGAAGAAGCATG--GAGG----GAGGGGTCTAA--CGTGAAAA-AAAAAAGAACCTAAAGAAT-----GAGGGCAGGACCTGTATATAGAGGATGTTTCAAAATTATGTTT-AGTATTTTGTTTTCACATTCCTAGAAGTATGCACA---TTTTTTGATATCCATACATCACCTGCTTTTTTACCCTGCACATTAGACATGCGATAAGATTTGGCTGATCACACAAGCATGCAAAGTATTATTATTCAGCA-TTTTAAGAACCAATGCAACACCTCAGAAAAACAAGTCAATCAATTCTGACCAAAGTAAACAGAGAAATGTAATT------AAAAA--------AAAAACACAACCAAAAATACCCACAATGCATTGCTTTCACAAGCAGAGATAATGAGCTAAAGGTTAAGGTGATTGGTCCAAGGTCCAAGAATTGAAAGGTGCAGTGGGGATCCCAGATAGTAACAATATAATCCAGAGTGGGAAGGAGGAACTGGAAGATTTTAAGGGTTCTTTTTTGACCATAAGCGCATTCATTGAACTCTGAAAAATAGAATTGATAACTGACGCTCTGGGCATGACCAAGGATCATCCTGTTTTATTTATTAAAAGGATCAAACTGAAAAAGTAGCTGATTAGC------AATAGAAGGGTTTATTTTCCTGTTTAGAAAAATGAATTTGTATCAAACAA--AATACATGAATTTGTTTTTTT----------------------------------------------AAATCCTGGGCAAAACTAAGCTATTAT-----AATCAAAGA----TTTCAAACCTTTTGAGGTATTTTTGTGC----------ATACAGACTTCCCC-AAAACATTACTTTGGGACCAAAAGACATGGAACAGCAGTAGAGATAAAAGATAAGACTTTCTACTTCATATTTGTTAAATCAAG-----------------ATTTGGA-TA---TGTTTATTGTTTATTCAACTAAACAAGCTGGCAAATTTAACCACTATCTTCTCTGTT-GTAATAAATAAACTAGTAAGTGAGGTCTTTAAATCATATTTTTAACTTGAATATGAAATAATTTACTTTTTGCAGGTAGCTGGAAGGTTTCCGAATTCTACTTAC----AATGACATTTTGTTGGGTTTACAGGGTAGGATGGTCATACTGTGCAATGCCCCAAATATGCTGTGCCTTTGTATTACACAACAGGCAGACTAAACTCATCTGTGATGCTCATTTTGCTACTATATTCTATCCATTTTCATAGTTTCCAATTGCAGTTAAAGCTTGATTATTAGAAAGTAATCTGCTACTCAACTACATTTTAGTAAAAAAGACA-CCTGTTCATAATGAGAAAGCTGACAGAATGGAAAGCACTGAAGCCAAGTGGTGATTAATTAACTTTTGATTATTTCAGTA-GGGAATACAGGTAAA-ATTTACAAACATCTCTTCTACAGAGAGGGATGGTGGCATTAAAAACATGAATCAAGTTTACCCTAAATTGTA-TCACTCAGTGGGAATATTCACCTAAATTCTAGAAGAATTCTAATATTCCCTGTATCAAATGCCACAAGGAGGCTAG-AGCACAATGATTAATGATGAAATTAGTTTACTAAGCTTAAAAGCAATTTTAGGCCATTCCCCATATAATACTGGACTTATTCCTTGCCATCTTCCATGTAAACTGGTGGTTTAGTTAATAAAAAAGAAAACATGGGAAATCAGCGTTCAATGTAATG--CAGAGACTGGTATGGTTAGACATAAAGA-TAAAATATCTTTGAGCGAACACAAT---------------CCTGACAC---------AGAGAATGGGTTCTCAAGTTTGGCCAATATACTGAAATGAGCTACATCGAGTAGGAACAAATCCAACCGTTTTTATAAAGTAACTCAGGAAAATTACAAAATAAAGAAGTCCCATGTTTCT-GGTGAGTGGTAT--CGCTTTGCAAGCATGACGGTTAACTCTCTTGGATTGAAATGGAAGGCGCTTCATGAACAATTTTTCCTGGTATGCAGAACTTCCAAAAGGTTTGCTTTTATGTTTTACTTGAGTATTTCTTGATGAAGTAATACTGCATCTTTATTCACTTCTT--TAAAGAGATGTCAGAGGTTGAAGGTCAAAGGTCAAGTTGAGAG-AAGAAAGAATAAAATTAAAAGCAAGTAATGGCAGAAGATGGAGATGATGGAATGCATGGGATTTAAACATTTATAAATTGCAAACAAAAGTTTATTTCTAAAGCAGTTCTCTTCCAGCGGCTTTTGGAGTCTGTCCATTTCAACA--------TGCACACTTGTCTAATAAAAATGCTTTAAATCTATGTAACGGAGCACCCCTAATGGCATGTCCACTTGGTCTAGA------------AATGAATGCTAAGTTAGTATACCTCA-----AAGCCAATTTTGCTGTCAGAAAAGGACCTACAAAGGAGGCTCTTTCCCTTTGTGTTTTAACTAAGTAGGAATGAATAGGCTCCTCTGCCCCTACGTTTAT-TCCTCAGGA------AGAATAT-----------------GGACAAAAACCTGTCATA------------GGCAGAGAAAAGAT---GAAGAACACGAATGTCACCTCTTTGAAGAAAGAAAGTCCTTGGTACAACTAACTTACTGAAGTCCACTCTTTATAAAAAGGAAAAAAATATATATATACATTTTAGGCTGATCCTGAGAAACAACTAAAAACAAAACCTGCTATCTTCACTCCTTCTCCCCCATTCAATAGCAAAGGATTTATTTGTTGCTATGGAATCATTCCACTGCATGAGACACCCTCCATACAAAAATCAAAGGGTGAAGGATGCTCAGCTACATTAGTTGTTTTACCATCATTCAGAAGCCAACTGTAGTTTAATTCTTCCTACTTCTCCCTTTCTCCCTGGATTCAATTGGACTTGGTTCATCTTTGAATTAACCTCTTTTAATCCGTTTCCTACAAAGAAAGCAAATCCATTGTGGGTAGCT-AGCTCTGCTGCTCACCACCCAGGCAGTGAAACCAAAAGGGAGGACG-ATGTGGTAGCCTCAGCCCCAACACAGGGCAGTGATAAGGGGGTTGAGCACAGCAGATGCAGTCTCGTACTACAGTCTTGAGTTCCTATTTTG-TTCTCTGCAGTAGTGTTAATCCATATTCGTGCGATGCTGAGTGAACTCCATGCCAACACACTGCTAGTAAACACAAGACAGTTCTGGCTGCTGTCTTAAGCCACTACTACGAGGGCTTAAGGTGGCCAAAATGAAGATTTATATAACAAATCGATATTTTGT-ATATACTGATAATGGTATATTTTGA-TTCTTGCCATCTGatctattaatttacaaatattcatagaatctctacaatgtggcacggcaacgtcccagaagttgTGACAGGGCCATGGTATTCTT----------TTCTG-TCCAGCTGCTT-----------------ATTTTGGAATCTAGTGCTTACCCTGGATAGGCGGGAATGGCTGTTGGAGGTACCGCTCGGACTGCACCATATACCGTCCGCCCTCTGCCCCTCAGATGGGCTCCTCTGAAAGCGGCTGCCGTGGTGGCTGCAGTCGGGTAAGGGAAGCCAGGAACTAAAGGGAGACCCAAAATATGACAGGAATGTCAACTTGAATTC------AATAGCAGGGGTACAATCACAACTTGCTTTGAACCAATTCCAGGAAAGGTTGGAAGAGAT-TATCACATCTTTTCTGAGAAAG-------------------------AAACT----------------------------GAGAGACCCAATATG--CAAAAACTAATGA-TGCATGCTCCG----TTCATCATCCAATCTTGAGTGAGTTTACTCTGCTCCTTCACAATTCTGGCCTTTACAATGCAAGCTGGTGAGAAAGAGGTCAAGAAGCTCTGAGGACTACTGCCGTAGTAAGAGACAAGAC-TTTTAATTTCTGCAGGCAGTTTAAATT--GTTGATAT-TAATTCTTTAACTGGCCAA---TTATTAATCTTATTTTCACATGTTGTTATGTGCACTTAATAATTATTCTTC-ATAAGAGCAGTCTTTTG-TGTTTGTATGTGGTGCTAACCTCCAAGGCATACAATAATCTTTAGA-----TATTTCATTAGTCCATTTTATTCTTTTA i canFam3.chr10 C 0 C 0 a score=173933.000000 s hg38.chr22_KI270876v1_alt 81563 88 + 263666 tttAAAACATTTTAATCCACAAATGTAAGGT--GAGGGAAACAACTCCTACCCTGTCCTTTAAAGAGGCAGACAATTTCTAGGGGCCTCA s panTro4.chr22 34459064 88 + 49737984 TTTAAAACATTTTAATCCACAAATGTAAGGT--GAGGGAAACAACTCCTACCCTGTACTTTAAAGAGGCAGACAATTTCTAGGGGCCTCA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30875577 88 + 46535552 tttaaaaaattttaatCCACAAATGTAAGGT--GAGGGAGACAACTCCTACCCTGTCCTTTAAAGAGGCAGACAACTTCTAGGGGCCTCA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100427734 88 - 115148730 TTTAAAAAATTTTAAGCCACAAATGTAAGGT--GAGGGAAACAACTCCTACCCTGTCCTTTAAAGAGGCAGATAATTTCTAAGGGCCTCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80575690 53 + 95678458 TTTAAAACATTTTAATCCACAAATGTAAGGT--GGGGGAAACCACTCCTCCCCTG----------------------------------- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81002476 53 - 96509753 TTTAAAACATTTTAATCCACAAATGTAAGGT--GGGGGAAACCACTCCTCCCCTG----------------------------------- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76259552 53 + 90941950 tttaaaacattttaatccaCAAATGTAAGGT--GGGGGAAACCACTCCTCCCCTG----------------------------------- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18529396 53 + 33263144 tttaaaacatttcaATCCACAAATGTAAAGT--GGGGGAAACCACTCCTCCCCTG----------------------------------- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198233588 88 + 210400635 TCTACAACATTTTAATCCACAAATGTAAGGT--GAGGGAAACCACTCCTCCCCTGTCCTTAAAAGAGGCAGACAGTTTCTAAGGGCCTCA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40857671 66 - 69331447 TCTAAAATGTTTTAATCCAGAAATGTTAGGGGAGAGGAAAACGACTTCTCCCTTG------------------TAATCCTGTGG------ i canFam3.chr10 C 0 C 0 e mm10.chr15 77098558 185 + 104043685 I a score=3641422.000000 s hg38.chr22_KI270876v1_alt 81651 970 + 263666 TATCCTTTAAAGAGGCAGACAATTTCTAAGAGCCTATTTTAAGTGTGCTGTCCTCTGGAAAGCATGCAGAGACATTGATTCCATGTCCACTGAATCCTGTTTAATTATACCTCTTGCTGGAGTAAAATGGCTCAGGTCAAAATGAC-TTAGAGAGATCAAGAGAGCTGGGAATAATCAATAATACTGGAAG-TACTTCTAAGTGATCCTCTGCTGGAGAACCTGTGGCTGACTCGCAGAGGAAATGT--ATAATATGCTCTACACATACTTGCTTCTTTTGTTTTCTTTATCGTCAAGTACAGACTAAAATATTCTTCATATGCCCTT-ACCCCCTCTACCTTT-TCCAACTATTTCTGCTTTGTG-CAATCTTAATATTTGGTCAGGAAAATTCTAGCACAGGTTAAGCAGGACAGGGCACTGGGATAGTATTTAATATCCCTCTCAAGAA------ATTTCCATTTCAGTTATGTACTGTACTAGGAAAAAAAAAAA---------------------CAGTACATGATAGTTCACTCACAACAGTC-AAAATCCATGCCAGGCCAACATAGGCTACTTACTGATTAAAGGAATGTAAGTGTTGATACCCCCTCTTCCTGATAGGGGCACTGCTGCATCATTGCCTAGGGACACATCTGCTTGAAAGCTGGATGCTGATTGGATTTTT--AAAAAATT--TAAAAATGCAAGAAGATT-AAAAAGGAGTCACAAATTGAAAAACAGCAGATGCTATTACAATTAAATAGCACAAGTGGAAACA-TTTACTTAAATACTACCTGCATATAACTCCGGACCATATACAGCTCCAACTACTGGGCTTAATTTCCAACCTGAAACACACAAAATGGAAGGTAAGCATTTAAGACTGTTTGAGGAAAGGG-ATGATCAGTGCATGT-CAAGTTGGCTTCAGCCATCTCTGGGGCT-ATTTTTGCCTATTATCAACTTCTCTTTGGAATTCCAGCTTGGGG------TTTATATGAGAGAGTAA s panTro4.chr22 34459152 970 + 49737984 TATCCTTTAAAGAGGCAGACAATTTCTAAGAGCCTATTTTAAGTGTGCTGTCCTCTGGAAAGCATGCAGAGACATTGATTCCATGTCCACTGAATTCTGTTTAATTATACCTCTTGCTGGAGTAAAATGGCTCAGGTCAAAATGACTTTAGAGAGATCAAGAGAGCTGAGAATAATCAATAATACTGGAGG-TACTTCTAAGTGATCCTCTGCTGGAGAACCTGTGGCTGACTTGCAGAGGAAATGT--ATAATATGCTCTACACATACTTGCTTCTTTTGTTTTCTTTATCGTCAAGTACAGACTAAAATATTCTTCATATGCCCTT-ACCCCCTCTACCTTT-TCCAACTATTTCTGCTTTGTG-CAATCTTAATATTTGGTCAGGAAAATTCTAGCACAGGTTAAGCAGGACAGGGCACTGGGATAGTATTTAATATCCCTCTCAAGAA------ATTTCCATTTCAGTTATGTACTGTACTAGG-AAAAAAAAAA---------------------CAGTACATGATAGTTCACTCACAACAGTC-AAAATCCATGCCAGGCCAACATAGGCTACTTACTGATTAAAGGAATGTAAGTGTTGATACCCCCTCTTCCTGATAGGGGCACTGCTGCATCATTGCCTAGGGACACATCTGCTTGAAAGCTGGATGCTGATTGGattttt--aaaaaatt--taaaaatGCAAAAAGATT-AAAAAGGAGTCACAAATTGAAAAACAGCAGATGCTATTACAATTAAATAGCACAAGTGGAAACA-TTTACTTAAATACTACCTGCATATAACTCCGGACCATATACAGCTCCAACTACTGGGCTTAATTTCCAACCTGAAACACACAAAATGGAAGGTAAGCATTTAAGACTGTTTGAGGAAAGGG-ATGATCAGTGCATGT-CAAGTTGGCTTCAGCCATCTCTGGGGCT-ATTTTTGCCTATTATCAACTTCTCTTTGGAATTCCAGCTTGGGG------TTTATATGAGAGAGTAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30875665 934 + 46535552 TATCCTTTAAAGAGGCAGACAGTTTCTAAAAGCCTATTTTAAGTGTGCTGTCCTCTGGAAAGCATGCAGAGACACTGATTCCATGTCCACTGAATCCTGTTTAATTATACCTCTTGCTGGAGTAAAATGGCTCAGGTCAAAATGACTTTAGAGAGATCAAGAGAGCTGAGAATAATCAATAATGCCGGAGG-TACTTCTAAGTGATCCTCTGCTGGAGAACCTGTGGCTGACTTGCAGAGGAAATGT--ATAATATGCTCTATACATACTTGCTTCTTTTGTTTTCTTTATCATCAAGTACAGACTAAG-------------GCCCTT-ACCCCCTCTACCTTT-TCCAACTATTTCTGCTTTGTG-CAATCTTAATATTTGGTCAGGAAAATTCTAGCACAGGTTAAGGAGGACAGGGCACTGGGATAGTATTTAATATCCCTCTCAAGAA------ATTTCCATTTCGGTTATGTACTGTACTAGGAAAAAAAAAAA--------------------CCAGTACATGACAGTTCACTCACAACAGTC-AAAATCCATGCCAGGCCAACATAGGCTACTTACTGATTAAAGGAATGTAAGTGTTGATACCCCCTCTTCCTGATAGGGGCACTGCTGCATCATTGCCTAGGGACACATCTGCTTGAAAGCTGGATGCTGATTGGattttt--aaaaaatt--taaaaatGCAAAAAGATT-AAAAAGGAATAGCAAATTGAAAAACAGCAGATGCTATTACAATTAAATAGCACAAGTGCAAACA-TTTACTTAAATACTACCTGCATATAACTCCGGACCATATACAGCTCCAACTACTGGGCTTAATTTCCAACCTGAAACACACAAAATG------------------------GAGGAAAGGG-ATGATCAGTGCACGC-CAAGTTGGCTTCAGCCATCTCTGGGGCT-ATTTTTGCCTATTATTAACTTCTCTTTGGAATTCCAGCTTGGGG------TTTCTATGAGAGAGT-A i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100427822 973 - 115148730 TATCCTTTAAAGAGGAAGACAGTTTCTAAGAGCCTATTTTAAGTGTGCTGTCCTCTGGAAAGCATGCAGAGACATTGATTCCATGTCCACTGGATCCTGTTTAATTATACCTCTTGCTGGAGTAAAATGGCTCAGGTCAAAATGACTTTAGAGAGATCAAGAGAGCTGAGAATAATCAATAATACTGGAGG-TACTTCTAAGTGATCCTCTGCTGGAGAACCTGTGGCTGACTTGCAGAGGAAATGT--GTAATATGCTCTACACATACTTGCTTCTTTTGTTTTCTTTATCATCAAGTACGGACTAAAATATTCTTCATATGCCCTT-GCCCCCTCTACCTTT-TCCGACTATTTCTGCTTTGTG-CAATCTTAATATTTGGTCAGGAAAATTTTAGCACAGGTTAAGCAGGACAGGGCACTGGGATAGTATTTAATATCCCTCTCAAGAA------ATTTCCATTTCGGTTATGTACTGTACTAGGAAAAAAAAAAA-----A--------------CCAGGACATGACAGTTCACTCACAACAGTC-AAAATCCATGCCAGGCCAACATAGGCTACTTACTGATTAAAGGAATGTAAGTGTTGATACCCCCTCTTCCTGATAGGGGCACTGCTGCATCATTGCCTAGGGACACATCTGCTTGAAAACTGGATGCTGATTGGATTTTT--AAAAAATT--AAAAAATGCAAAAAGATT-AAAAAGGAATAGCAAATTGAAAAACAGCAGATGCTATTACAATTAAATAGCACAAGTGGAAACA-TTTACTTAAATACTACCTGCATATAACTCCGGACCATATACAGCTCCAACTACTGGGCTTAATTTCCAACCTGAAACACACAAAATGGAAGGTAAGCATTTAAGACTGCTTGAGGAAAGGG-ATGATCAGTGCATGT-CAAGTTGGCTTCAGCCATCTCTGGGGCT-ATTTTTGCCTATTATCAACTTCTCTTTGGAATTCCAGCTTGGGG------TTTATATGGGAGAGTAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80575743 991 + 95678458 --TCCTTTAAAGAGGCAGACAATTTCTAAGAGCCGATTTTAAGTGTGCTGTCCTTTGGAAAGCATGCAGAGACATTGATTCCATGTCCACTGAGTCCTGTTTAATTATACCTCTTGCTGCAGTAAAATGGCTCAGGTCAAAATGACTTTAGAGAGATCAAGGGAGCTGATAATAATCAATAATATTGAAGG-TACTTCTAAGTGATCCTCTGCTGGAGAACCTGTGGTTGACTTGCCAAGGAAATGT--ATAATATGCTCTACACATACTTGCTTCTTTTGTTTTCTTTATCATCAAGTACAGACTAAAATATTCTTCAT-TGCCCTT-ACCCCCTCTACATTTATCCAACTATTTCTGCTTTGTG-CCATCTTAATATTTGGTCAGGAAAATTCTAGCACAGGTAAAGCAGGACAGGGCACTGGGATAGTATTTAACATCCCTCTCAAGAA------ATTTCCATTTCAGTTATGTACTATACTAGGAAAAAAAACAACAAACAAACAAAAAAAAAACCCAGTACATGACAGTTCACTCACAATAGTC-AAAATCTATGCCAGGCCAACATAGGCTACTTACTGATTAAAGGAATGTAAGTGTTGATACCCCCTCTTCCTGACAGGGGCACTGCTGCATCATTGCCTAGGGACACATCTGCTTGAAAGCTGGATGCTGATTGGattttt-aaaaaaatt--aaaaaatGCAAAAAGATT-AAAAAGGAATAGCAAATTGAAAAACAACAGATGCTATTACAATTAAATAGCACAAGTGGAAACA-TTTACTTAAATACTACCTGCATATAACTCCGGACCATATACAGCTCCAACTACTGGGCTTAATTTCCAACCTGAAACACACAAAAAGGAGGGTGAGCATTTAAGACTACTTGAGGAAAGGG-ATGATCAATGCATGT-CAAGTTGGCTTCGGCCATCTCTGGGGCT-ATTTTTGCCTATTACCAACTTCTCTTTGGAATTCCAGCTTGGGG------TTTACATGAGAAAGCAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81002529 991 - 96509753 --TCCTTTAAAGAGGCAGACAATTTCTAAGAGCCGATTTTAAGTGTGCTGTCCTTTGGAAAGCATGCAGAGACATTGATTCCATGTCCACTGAGTCCTGTTTAATTATACCTCTTGCTGCAGTAAAATGGCTCAGGTCAAAATGACTTTAGAGAGATCAAGGGAGCTGATAATAATCAATAATATTGAAGG-TACTTCTAAGTGATCCTCTGCTGGAGAACCTGTGGCTGACTTGCCAAGGAAATGT--ATAATATGCTCTACACATACTTGCTTCTTTTGTTTTCTTTATCATCAAGTACAGACTAAAATATTCTTCAT-TGCCCTT-ACCCCCTCTACATTTATCCAACTATTTCTGCTTTGTG-CCATCTTAATATTTGGTCAGGAAAATTCTAGCACAGGTAAAGCAGGACAGGGCACTGGGATAGTATTTAACATCCCTCTCAAGAA------ATTTCCATTTCAGTTATGTACTATACTAGGAaaaaaaacaacaaacaaacaaacaaaaaacCCAGTACATGACAGTTCACTCACAATAGTC-AAAATCTATGCCAGGCCAACATAGGCTACTTACTGATTAAAGGAATGTAAGTGTTGATACCCCCTCTTCCTGACAGGGGCACTGCTGCATCATTGCCTAGGGACACATCTGCTTGAAAGCTGGATGCTGATTGGATTTTT-AAAAAAATT--AAAAAATGCAAAAAGATT-AAAAAGGAATAGCAAATTGAAAAACAACAGATGCTATTACAATTAAATAGCACAAGTGGAAACA-TTTACTTAAATACTACCTGCATATAACTCCGGACCATATACAGCTCCAACTACTGGGCTTAATTTCCAACCTGAAACACACAAAAAGGAGGGTGAGCATTTAAGACTACTTGAGGAAAGGG-ATGATCAATGCATGT-CAAGTTGGCTTCGGCCATCTCTGGGGCT-ATTTTTGCCTATTACCAGCTTCTCTTTGGAATTCCAGCTTGGGG------TTTACATGAGAGAGCAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76259605 988 + 90941950 --TCCTTTAAAGAGGCAGACAGTTTCTAAGAGCCGATTTTAAGTGTGCTGTCCTTTGGAAAGCATGCAGAGACATTGATTCCATGTCCACTGAGTCCTGTTTAATTATACCTCTTGCTGCAGTAAAATGGCTCAGGTCAAAATGACTTTAGAGAGATCAAGGGAGCTGATAATAATCAATAATATTGAAGG-TACTTCTAAGTGATCCTCTGCTGGAGAACCTGTGGCTGACTTGCCAAGGAAATGT--ATAATATGCTCTACACATActtgcttcttttgttttctttatcatcAAGTACAGACTAAAATATTCTTCATATGCCCTT-ACCCACTCTACCTTT-TCCAACTATTTCTGCTTTGTG-CCATCTTAATATTTGGTCAGGAAAATTCTAGCACAGGTAAAGCAGGACAGGGCACTGGGATAGTATTTAACATCCCTCTCAAGAA------ATTTCCATTTCAGTTATGTACTatactaggaaaaaaaacaacaaaca---aaaaaaacaccccagTACATGACAGTTCACTCACAATGGTC-AAAATCTATGCCAGGCCAACATAGGCTACTTACTGATTAAAGGAATGTAAGTGTTGATACCCCCTCTTCCTGACAGGGGCACTGCTGCATCATTGCCTAGGGACACATCTGCTTGAAAGCTGGATGCtgattggattttt-taaaaaatt--aaaaaatgcaaaaagatt-aaaaaggaatagcaaattgaaaaacaacagatgctattACAATTAAATAGCACAAGTGGAAACA-TTTACTTAAATACTACCTGCATATAACTCCGGACCATATACAGCTCCAACTACTGGGCTTAATTTCCAACCTGAAACACACAAAAAGGAGGGTGAGCATTTAAGACTACTTGAGGAAAGGG-ATGATCAATGCATGT-CAAGTTGGCTTCGGCCATCTCTGGGGCT-ATTTTTGCCTATTACCAACTTCTCTTTGGAATTCCAGCTTGGGG------TTTACATGAGAGAGCAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18529449 985 + 33263144 --TCCTTTAAAGAGGCAGACAATTTCTAAGAGCCGATTTTAAGTGTGCTGTCCTTTGGAAAGCATGCAGAGACATTGATTCCATGTCCACTGAGTCCTGTTTAATTATACCTCTTGCTGCAGTAAAATGGCTCAGGTCAAAATGACTTTAGAGAGATCAAGGGAGCTGATAATAATCAGTAATATTGAAGG-TACTTCTAAGTGATCCTCTGCTGGAGAACCTGTGGCTGACTTGCCAAGGAAATGT--ATAATATGCTCTACACATACCTGCTTCTTTTGTTTTCTTTATCATCAAGTACAGACTAAAATATTCTTCATATGCCCTT-ACCCCCTCTACCTTT-TCCAACTATTTCTGCTTTGTG-CCATCTTAATATTTGGTGAGGAAAATTCTAGCACAGGTAAAGCAGGACAGGGCACTGGGATAGTATTTAACATCCCTCTCAAGAA------ATTTCCACTTCAGTTATGTACTATACTAGGAAAAAAAACAACAAACA------AAAAAACCGCAGTACATGACAGTTCACTCACAATAGTC-AAAATCTATGCCAGGCCAACATAGGCTACTTACTGATTAAAGGAATGTAAGTGTTGATACCCCCTCTTCCTGACAGGGGCACTGCTGCATCATTGCCTAGGGACACATCTGCTTGAAAGCTGGATGCTGATTGGATTTTT-TAAAAAATT--AAAAAATGCAAAAAGATT-AAAAAGGAATAGCAAATTGAAAAACAACAGATGCTATTACAATTAAATAGCACAAGTGGAAACA-TTTACTTAAATACTACCTGCATATAACTCTGGACCATATACAGCTCCAACTACTGGGCTTAATTTCCAACCTGAAACACACAAAAAGGAGGGTGAGCATTTAAGACTACTTGAGGAAAGGG-ATGATCAATGCATGT-CAAGTTGGCTTCGCCCATCTCTGGGGCT-ATTTTTGCCTATTACCAGCTTCTCTTTGGAATTGCAGCTTGGGG------TTTACATGAGAGAGTAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198233676 986 + 210400635 TATCC---AAAGAGGCAGACAATGTCTAAGAGCCTATTTTAAGTGTGCCGTCTTCTGGAAAGCATGCAGAGACACTGATTCCATGTCCACTGAATCCTGTTTAATTACACCTCTTGCTGGAGTAAAATGGCTCAGGTCAAAATGACTTTAGAGAGATCATGAGAGCTGAGAATAATCAGTAATGCTGGAGGTTATTTCTAAGTGATCCTCTGCTGGAGAACCTGTGGCTGACTTGCAGAGAAAATAC--GTAATATACTCTACACAGAATCGCTTCTTTTGTTTTCTTTATCATCAAGTACAGACTAAAATATTCTTCATATGCCCTT-ACCCCCTCTACCTAT-TGCAACTGTTTTTGCTTTGTATCAATCTTAATATTTGGTCAGGAAAATTCTAGCACAGGTTAAGCAGGACAGGGCACTGGGATAGTATTTAATATTCCTCTCAAGAA------ATTTTCATTTCAGTTATGTATTGTACCAGGAAACAAACAAAAAAACA--------AAAAAACCAGCACATGACAGTTCATTCACTACAGTG-AAAATCCATGCCAGACCAACATAGGCTACTTACTGATTAAAGGAATGTAAGTGTTGATACCCCCTCTTCCTGACAGGGGCACTGCTGCATCATTGCCTAGAGATACATCTGCTTGAAAGCTGGATGCTGATTGCATTTAAAAAAAAAAGT--TAAAAATGAAAAAAGATTAAAAAAGGAATAGCTAATTGAAAAACAACAGATGCTATTACAATCAAATAGCACAAATGGAAACA-TTAACTTAAATGCTACCTGCATATAACTCTGGACCATATACAGCTCCAACTACTGGGCTTAATTTCCAACCTGTAACACACAAAAAGGAAAGTGAGCATTTAAGACTACTTGAGGAAAGGA-ATGATTAATGCATGG-CAAGTTGGCTTCAGCCATGGCTGGGGCT-ATTTTTGCCTATTACCAACTTCTCTTTAGATTTCCAGCTTAGGG------TTTATATGAGAGAGTAA i calJac3.chr1 C 0 C 0 s mm10.chr15 77098743 851 + 104043685 CACCCTTTAGCGAGACAGAC-------AAAAGCTGGCTCTAAGTGTTCCTTGCTCTGGAAGCCTTGTACAAACA-----TCCTGCTCTGTGGAATCTGGTTTAGTTACACCTCTTGCCAGGGGAAACAGGCCTGGGTAAAAGTGACTTTAGAGACAGCAAGAAAGTGG---CCTGTCACGGACACTGGAGA-TG--TCTAAGTGGTACTCCAGAGGAGAGTGGGTGG-------GATGAGCAGGCTTCAGTAATGCAGGCGAGACATGCTCTTATCTTCTGATTTCCTTATGATCACATCCAGG-TAGGATA---GTTACATGTTCAT------CTGTACACTT-TCCCATGATTTTTGTTTTGTG---------------------GATGTTTCTAGTATGAGTTACATAAAACAGGGCATTG---TGGTATCTATTA-CTCTGTCAAGAATGGTTCTTTTCCA--TCAGTTCTGCATTATGCTAGAACAAAAACAGACCAAAC---------------TAGCACATG---------TGGCAACCGTCAAAAACCCATGGTAGGTCAGTGTAGGCTACTTACTGATTAGAGGGATGTAAGTGTTGATGCCTCCTCTTCCTGACAAGGGCACAGCCGCCTCATTGCCTAGGGACACATCAGCTTGAAAGCTGGATGCTAAGTGCATT----AAAAACAAA--ACAAAACCCACAAAGGTT-ACAAAGATGTAAGCATATGAGAAACCAGAGGT--------CACTGAGTAGCAGACAGGAAAACAGTGCACTCG-----TACCTGCATATAACTCAGGACCATACACAGCTCCAACTACTGGGCTTAACTTCCAGCCTGAAACAGAA------------------------------GAGGACAGGA-GTGAACTGTGCAGGT-CAAGATGGCTTCAGGCACCTCT-GGGCT-GTTTTTCCT----------------------CCCCAGGCCAGAG------TTTACATGAAAGGGCAA i mm10.chr15 I 185 I 112 s canFam3.chr10 40857737 972 - 69331447 ---CCTTCAGAGAGGCAGAAAGTTTCTAAAGGTCTATTTTAAATGTGCTATCCTCTGGAAAGCACACAGAGACATTTATTCCATGTTCACTGAACTCTTTTTAATTATAC--CTTGCTAGAGCAAAATGGCTCAGGTCAGAATGACTTCAGAGGTATCAACAGAG-GGAGAATAATCATTAATGCTGGAGG-TGCTTCTAAATGATACTCTACTAAAAAGCCCAAAGCTGACCTGCAGAGAACATGC--ATATTATATTCCACAAGTATCTATTTCTTTGGTT----TTAAAATCAAGTGCAGACTAAAATGTTCTACACATGTCCTCAATCCCCTTGACCTTT-TCCAACTATTTATGCTTCGTGGCAATCTCAGTATCTGGTCAGAAAGATTCTTACACAGGTTAAGCAGGATGGGACACTGTGACAGCATTTAA---CTCTCTTGAGAAG-----GCCTCCTCCTCAGTTATATATTATACTTGGGGAAGAAGAAAAAGACT--------------AGGACACATCACTGTTTACTCACAACAGTC-AAAATCCATGCCAGGCCAACATAGGCTACTTACTGATTAAAGGAATGTAAGTGTTAATACCCCCTCTTCCTGATAGGGGCACTGCTGCATCATTGCCTAGGGACACGTCTGCTTGAAAGCTGGATGCTGATTGCattt---aaaaaaattaaaaaaaatGCAAAAAGATT-ACAAAGGAATAGTAGATCGAAAACCAACAGATGTTGTCATGGTC-AATAGGCCAAATGGAAAAA-TTAA-TGAAATACTACCTGCATATAACTCAGGGCCATATACAGCTCCAACTACGGGGCTTAATTTCCAACCTGCAATGGA-AGAGAGGACAGAGAGCATTTAAGACTCCATGAGGAAAAGGTGTGATGAGGGCATGTGAAAGCTGGCTCCAGACATCCCTGCATTTAAGCTCCACCCAACACTATCTTCTCTGTAGA-CGCCAGCTGATGGGTCACTTCCACACCTGAGCAT-- i canFam3.chr10 C 0 C 0 a score=210375.000000 s hg38.chr22_KI270876v1_alt 82621 66 + 263666 -CAGTAGTAGAACTAGGACACAGTGAAGAGATAATGAGGGGCTGGGGCTGGGGGGCTTGGCAGGTGT s panTro4.chr22 34460122 66 + 49737984 -CAGTAGTAGAACTAGGACACAGTGAAGAGATAATGAGGGGCTGGGGCTGGGGGGCTTGGCAGGTGT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30876599 66 + 46535552 -CAGTAGTGAAACTAGCACACAGTGAAGAGATGATGAGGGGCTGGGGTTGGGGGGCTTGGCAGGAGT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100428795 66 - 115148730 -CAGTAGTAGAACTAGCACAGAGTGAAGAGATAATGAGGGGCTGGGGTTGGGGGGCTTGGCAGGAGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80576734 66 + 95678458 -CAATAGTAGAACTAGCACACAGTGAAGAGATAATGAAGGGTTGGGGTTGGGGGGCTTGGCAGGGGT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81003520 66 - 96509753 -CAATAGTAGAACTAGCACACAGTGAAGAGATAATGAAGGGTTGGGGTTGGGGGGCTTGGCAGGGGT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76260593 66 + 90941950 -CAATAGTAGAACTAGCACACGGTGAAGAGATAATGAagggttggggttggggggctTGGCAGGGGT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18530434 66 + 33263144 -CAATAGTAGAACTAGCACACAGTGAAGAGATAATGAAGGGCTGGGGTTGGGGGGCTTGGCAGGGGT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198234662 65 + 210400635 -CAATAGTAGAACTAGCACACAGTGAAGAGATAATGAGGGGCTGGGTGT-GGGAGCTTGGCAGGAGT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40858709 58 - 69331447 CTTTAAGCAGAACAAG--CACAGTGAAGGGATAATAAGGGG-------GGGTGGGTGTTGCAGGTAT i canFam3.chr10 C 0 C 0 e mm10.chr15 77099594 112 + 104043685 I a score=831695.000000 s hg38.chr22_KI270876v1_alt 82687 245 + 263666 --CATGATGTTGGG-AGGAGGAAGATGGAGAG---GGAATGAGAGGAGAAAA-------AATAAATAGAAATAAATCCTAGAGTTTGGTAAAGTGT-TCTCACAGAATTACCCTGGATGACCTATCCTTCA------------------TTTA-AAA----AAAGAAGGCCGACTATATGTCACTCTGAACCATGCTGTGATGCATTTTCTCA------------ACCCTGTTTA------TTACTCTAGTTGTTTTAATAAAGGTATCCATGGGCTGAACTCAAATTCAACCTAGATCT s panTro4.chr22 34460188 245 + 49737984 --CATGATGTTGGG-AGGAGGAAGATGGAGAG---GGAATGAGAGGAGAAAA-------AATAAACAGAAATAAATCCTAGAGTTTGGTAAAGTGT-TCTCACAGAATTACCCTGGATGACCTATCCTTCA------------------TTTA-AAA----AAAGAAGGCCGACTATATGTCACTCTGAACCACACTGTGATGCATTTTCTCA------------ACCCTGTTTA------TTACTCTAGTTGTTCTAATAAAGGTATCCATGGGCTGAACTCAAATTCAACCTAGATCT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30876665 249 + 46535552 --CATGACATTGGG-AGGAGGAAGATGGAGAG---GGAATGAGAGGAGAAAA-------AATAAATAGAAATAAATCCTAGAGTTTGGTAAAGTGT-TCTCACAGAATTACCCTGGATGACCTATCCTTCA------------------CTTA-AAAAAAGAAAGAAGGCCGACTATATGTCACTCTGAACCGCACTGTGATGCATTTTCTTA------------ACCCTGTTTA------TTACTCTAGTTGTTTTAATAAACGTATCCATGGGCTGAACTGAAATTCAACCTAGATCT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100428861 249 - 115148730 --CATGATGTTGGG-AGGAGGAAGATGGAGAG---GGAATGAGAGGAGAAAA-------AATAAATAGAAATAAATCCTAGAGTTTGGTAAAGTGT-TCTCACAGAATTACCCTGGATGACCTATCCTTCA------------------TTTA-AAAAAAGAAAGAAGGCCGACTATATGTCACTCTGAACCACACTGTGATGCATTTTCTTA------------ACCCTGTTTA------TTACTCTAGTTGTTTTAATAAAGGTATCCATGAGCTGAACTCAAATTCAACCTAGATCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80576800 249 + 95678458 --CATGATGTTAGG-AGGAGGAAGATGGAGAG---GGAATGAGAGGAGAAAA-------AATAAATAGAAATAAATCCTAGAGTTTGGTACAGTGT-TCTCACAGAATTACCCTGGATGACCTATCCTTCA------------------TTTA-AAAAAAGAAAGAAGGCCGACTATATGTCATTCTGTACCACACTGTGATGCACTTTCTTA------------ACCCTGCTTA------TTACTCTAGCTGTTTTAATAAAAGTATCCATGGGCTGAACTCAAATTTAACCTAGATCT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81003586 249 - 96509753 --CATGATGTTAGG-AGGAGGAAGATGGAGAG---GGAATGAGAGGAGAAAA-------AATAAATAGAAATAAATCCTAGAGTTTGGTACAGTGT-TCTCACAGAATTACCCTGGATGACCTATCCTTCA------------------TTTA-AAAAAAGAAAGAAGGCCGACTATATGTCATTCTGTACCACACTGTGATGCACTTTCTTA------------ACCCTGCTTA------TTACTCTAGCTGTTTTAATAAAAGTATCCATGGGCTGAACTCAAATTTAACCTAGATCT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76260659 249 + 90941950 --CATGATGTTagg-aggaggaagatggagag---ggaatgagaggagaaaa-------aataaatagaaataaatcccAGAGTTTGGTACAGTGT-TCTCACAGAATTACCCTGGATGACctatccttta------------------ttta-aaaaaagaaagaaggccgACTATATGTCATTCTGTACCACACTGTGATGCACTTTCTTA------------ACCCTGTTTA------TTACTCTAGCTGTTTTAATAACAGTATCCATGGGCTGAACTCAAATTTAACCTCGATCT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18530500 249 + 33263144 --CATGATGTTAGG-AGGAGGAAGATGGAGAG---GGAATGAGAGGAGAAAA-------AATAAATAGAAATAAATCCTCGAGTTTGGTATAGTGT-TCTCACAGAATTACCCTGGATGACCTATCCTTCA------------------TTTA-AAAAAAGAAAGAAGGCCGACTATATATCAATCTGTACCACACTGTGATGCACTTTCTTA------------ACCCTGTTTA------TTACTCTAGCTGTTTTAATAAAAGTATCCATGGGCTGAACTCAAATTTAACCTAGATCT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198234727 250 + 210400635 --CATGATGTTGGGAAGGAGGAAGATGGAGAG---GGAATGAGAGGAGAAAA-------AACAAATATAAATAAATCCTAGAGTTTGGTACAGTGT-TCTCACAGAATTACCCCAGATTACCTATTCTTCA------------------TTCAGAAAAAAGAAAGAAGACAGACTGTATGTTACTCTGTACCACACTGTGATGCACTTTCCTA------------ACCCTGTTGA------TTACTCTAGTTGTT-TAATAAAGGTATCCTTGGGCTGAACTAAAATTTAACGTAGATCT i calJac3.chr1 C 0 C 0 s mm10.chr15 77099706 246 + 104043685 --catcagactgta-actagaacaGAAAAACA---AAAATGGAGGGAGAGAA-------GATCACTA-----------TGGCGTTT-GCAGACTGT-GCTCAGAACTGTACCC-AGATGGCCTGCTCTGAG------------------CTGA-GAGGAGGAAAGAAATCTGAGCCCCTCTCATTTGGCACTGCATGGCAACACACTTCCTGACTGA-------CACGACATCTAAGCACTTTACACTAGATGCTTT-ATGAAGGCATCCTCAGGCTGAATTAAAACCTGACCTAGAGCT i mm10.chr15 I 112 I 166 s canFam3.chr10 40858767 283 - 69331447 AGGGGCAAACGGGG-AGGAGAAAAACTGGGTGGGAGGAAAGAGAAGGACAAAGAAATGTAAGAAATAAAAGTAAATCCTGGGCTCTGGTTTCGTCTCTTTCATAGAACTGCTT---AGAACATATTCTTTGAAAAAAAAATTCTTTGTTTTTA-GAAAAATGAGAAAGGCAGAATATATGTCATTGTACACCACACTGTGATGCACTTTCTTATTCATCATCTTCACACTGTTTA------CTACTCTCACTGCTTT-ATAAAGGTATATT----CTGAATTTAAATTTGAGCT-GATCT i canFam3.chr10 C 0 C 0 a score=1085544.000000 s hg38.chr22_KI270876v1_alt 82932 320 + 263666 TTGACTCCATGTTTGGCTATACAATGCTGGT---ATTCCAGGTAAACTGAAATCCACTTTTACTCGGATTTACCATTGGGATTTTACTGGGGTT------CACCAACTAAAAAAGGAAAGACATGAAATAGTAAAATTCAAGGTACATTCCCAACTTCAGTGCATGTTTTCTGAGGCTTTAATGTGTAATAATCACCTT------TAAGTTAATCAGACTTCTTAGCT-AAAGAACACCAGAATACTGTGGAACATTAGCTTAAATATTTATAAATATTAAGAGTTTCCAAATAACATTATGTTTAATGTCAACTTTATTTCTTCTTTCCCTTTTT- s panTro4.chr22 34460433 320 + 49737984 TTGACTCCATGTTTGGCTATACAATGCTGGT---ATTCCAGGTAAACTGAAATCCACTTTTACTCGGATTTACCATTGGGATTTTACTGGGGTT------CACCAACTAAAAAAGGAAAGACACGAAATAGTAAAATTCAAGGTACATTCCCAACTTCAGTGCATGTTTTCTGAGGCTTTAATGTGTAATAATCACCTT------TAAGTTAATCAGACTTCTTAGCT-AAAGAACACCAGAATACTGTGGAACATTAGCttaaatatttataaatattaaGAGTTTCCAAATAACATTATGTTTAATGTAAACTTTATTTCTTCTTTCCCTTTTT- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30876914 312 + 46535552 TTGACTCCATGTTTGGCTATACAATGCTGGT---ATTCCAGGTAAATTGAAATCCACTTTCACTCGGATTTACCATTGGGATTTTACTGGGGTT------CACCAACTAAAAAAGGAAAGACATGATATAATAAAATTCAAGGTACATTCCCAACTTCAGTGCATGTTTTCTGAGGCTTTAATGTGTAATAATCACCTT------TAAGTTAATCAGACTTCTTAGCT------ACACCAGAATACTGTGGAACGTTAGCGTAAATATTTGTAAATATTAAGAGTTTCCAAATAACATTATGTTTAATGTCAACTTTAT---TTCTTTCCCTTTTT- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100429110 311 - 115148730 TTGACTCCATGTTTGACTATACAATGCTAGT---ATTCCAGGTAAACTGAAA---------ACTCGGATTTACCATTGGGATTTTATTGGGGTT------CACCAACTAAAAAAGGAAAGACATGAAATAATAAAATTCAAGGTACATTCCCAACTTCAGTGCATATTTTCTGAGGCTTTAATGTGTAATAATCACCTT------TAAGTTAATCAGACTTCTTAGCT-AAAGAACACCAGAATACTGTGGAACGTTAGCTTAAATATTTATAAATATTGAGAGTTTCCAAATAACGTTATGTTTAATGTCAACTTTATTTCTTCTTTCCCTTTTT- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80577049 315 + 95678458 TTGACTCCATGCTTGAGT---CAATGCTGGT---ATTCCAGGTAAACTGAAATCCACTTTCACTGGGATTTACCATTGGGATTTTATTAGGGTT------CACCAACTAAAAAATGAAAGACATGAAATCATAAAATTCAAAGTACATTCCCAACTTCAGTGCATGTTTTCTGAGGCTCTAATGTGTAACAATCACCTT------TAAGTTAATCAGACTTTTTAGTT-AAAGAACACCAGAATACTGTGGAATGTTACCttaaatatttataaatattaaGAGTTTCCAAATAACATTATGTTTAATGTCAACTTTATTTCTTCTTTCCCTTT--- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81003835 315 - 96509753 TTGACTCCATGCTTGAGT---CAATGCTGGT---ATTCCAGGTAAACTGAAATCCACTTTCACTGGGATTTACCATTGGGATTTTATTAGGGTT------CACCAACTAAAAAATGAAAGACATGAAATCATAAAATTCAAAGTACATTCCCAACTTCAGTGCATGTTTTCTGAGGCTCTAATGTGTAACAATCACCTT------TAAGTTAATCAGACTTTTTAGTT-AAAGAACACCAGAATACTGTGGAATGTTACCTTAAATATTTATAAATATTAAGAGTTTCCAAATAACATTATGTTTAATGTCAACTTTATTTCTTCTTTCCCTTT--- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76260908 317 + 90941950 TTGACTCCATGCTTGAGT---CAATGCTGGT---ATTCCAGGTAAACTGAAATCCACTTTCACTGGGATTTACCACTGGGATTTTATCAGGGTT------CACCAACTAAAAAACGAAAGACATGAAATCATAAAATTCAAAGCACATTCCCAACTTCAGTGCATGGTTTCTGAGGCTCTAATGTGTAACAATCACCTT------GAAGTTTATCAGACTTTTTAGTT-AAAGAACACCAGAATACTGTGGAATgttaccttaaatatttataaatattaagagTTTCCAAATAACATTATGTTTAATGtcaactttatttcttctttcccttttt- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18530749 317 + 33263144 TTGACTCCATGCTTGAGT---CAATGCTGGT---ATTCCAGGTAAACTGAAATCCACTTTCACTGGGATTTACCATTGGGATTTTATTAGGGTT------CACCAACTAAAAAATGAAAGACATGAAATCATAAAATTCAAAGTACATTCCCAACTTCAGTGCATGTTTTCTGAGGCTTTAATGTGTAACAATCACCTT------TAAGTTAATCAGACTTTTTAGTT-AAAGAACACCAGAATACTGTGGAATGTTACCTTAAATATTTATAAATATTAAGAGTTTCCAAATAACATTATGTTTAATGTTAACTTTATTTCTTCTTTCCTTTTTT- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198234977 321 + 210400635 TTGACTCCATGTTCAATTATACAATGCTGGT---ATCCCAGGTAAACTGAAATTCACTTTCACTGGGATTAACCATTGGGATTTTATTGGGGTT------CACCAACTGAAAATCGAAAGACAGGAAATAATAAAATTCGAGGTACAGTCCCAATTTCCATGAATGTTTTCTGAGGTTTTAATGTGTGATAATCACTTT------TAAGTTAATCAGACTTTTTAGTTAAAAAAACACCAGAATGCTGTGGAACATTAGCttaaatatttataaatattaaGAGTTTCCAAATAACATTATGTTTAATGTCAACTTTATTTCTTCTTTCCCTTTTT- i calJac3.chr1 C 0 C 0 s mm10.chr15 77100118 293 + 104043685 TTGATGGCACATTCAGTTATACTGCACAAGT---TTTGTATGTAAACCGAAATCTCCCTTCA-----------TAGTAAAA----ATTGGGGTT------CACCAAGGAGAGAGGGAAAGACATGCAGTAATGAAATGTGAAGTCCATTCCGAGCCTCTGTGCACGGCTTC--AGGTTTAAATTTATAATAAACATTTTAATGAACATGTTATTCAAGACTCT------GAAGGATACCAGGCTA------GACATTAAGTTCAAGATTTAGAAATGTT--GAATTTCCAAATA---CTATGTTGGGATTttccttccttccttccttccttcctt- i mm10.chr15 I 166 I 1731 s canFam3.chr10 40859050 317 - 69331447 TTGACTC--TGTTCAATTATACCATACTGATGGAAATCTAGGTAAGTGAAAATCCCCTTTCTTTGGGATTTACCAATGGAATTTCGGTGCAGTTATCCTCAGCCAAGTGAACAAGAAGAGACACTCAGTAATAAAATTCAAGGTACATCCCCAATTTCA-TGCAT--TTTTTGGGATTTTAAGTGGTAATAAACATACT-----------TAATTAGTTGTTTTAGCT-AAAGGATACTAGACTGCTGTTGAGTACCAACCTAAGCATTTATAAACTTTAAGTACTTGCAAA---CATTAGGTTTGGTGTCAACTTTATTTCTTCATCCCCCTTTTT i canFam3.chr10 C 0 C 0 a score=638504.000000 s hg38.chr22_KI270876v1_alt 83252 232 + 263666 TATATTTATAGGAATATGGCAAGTATTTTTTAAAAAGGAATAATATACGATTGCTCACTGCGAGTGAATAAAAGTAGAATTCCACATGAAAACTTTAATCAATATTAACTGAATTTTACATAT---AAGCAAAAATACTCTATATTATATATTTTCTGACTCATTTGTCT--TTTTATATTAAGACCCTAGCATTGTGCCACACTAT---TCTATAAATATACGAATGAAA---AGA--AAAAGG s panTro4.chr22 34460753 232 + 49737984 TATATTTATAGGAATATGGCAAGTATTTTTTAAAAAGGAATAATATATGATTGCTCACTGAGAGTGAATAAAAGTAGAATTCCACATGAAAACTTTAATCAATATTAACTGAATTTTACATAT---CAGCAAAAATACTCTATATTATATATTTTCTGACTCATTTGTCT--TTTTATATTAAGACCCTAGCATTGTGCCACACTAT---TCTATAAATATACGAATGAAA---AGA--AAAAGG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30877226 232 + 46535552 TATATTTATAGGAATATGGCAAGTATTTTTTAAAAAGGAATAATATATGATTGCTCACTGAGAGTGAATAAAAGTAGAATTCCACATGAAAACTTTAATCAATATTAATTGAATTTTACATAT---AAGCAAAAATACTCTATATTATACATTTTCTGACTCATTTGTCT--TTTTATATTAAGACCCTAGCATTGTGCCACACTAT---TCTATAAATATACGAATGAAA---AGA--AAAAGG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100429421 227 - 115148730 TATATTTATAGGAATATGGCAAGTATTTTTTTAAAAGGAATAATATATGATTGCTCACTGAGAGTGAATAAAAGTAGAATTCCGCATGAAAACTTTAATCAATATTAATTGAATTTTACATAT---ATGCAAAAA-----TATATTATATATTTTCTGGCTCATTTGTCT--TTTTATATTAAGACCCTAGCATTGTGCCACACTAT---TCTATAAATACACGAATGAAA---AGA--AAAAGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80577364 228 + 95678458 ----TTTATAAGAATATGGCAAGTATATTTTAAAAAGGAATAATGTATTATTGCTCACTGAGAGTGAATAAAAGTAGAATTCCACATGAAAACTTTATTT--TATTAATTGAATTTTACATATAATAAGCAAAAATACTCTACATTAT---TTTTCTGACTCATTTGTCTTCTTTTATATTAAGACCCTAGCATTGTGCCACATTAT---TCTATATATATACGAATGAAA---AGA--AAAGGG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81004150 228 - 96509753 ----TTTATAAGAATATGGCAAGTATATTTTAAAAAGGAATAATGTATTATTGCTCACTGAGAGTGAATAAAAGTAGAATTCCACATGAAAACTTTATTT--TATTACTTGAATTTTACATATAATAAGCAAAAATACTCTACATTAT---TTTTCTGACTCATTTGTCTTCTTTTATATTAAGACCCTAGCATTGTGCCACATTAT---TCTGTAAATATACGAATGAAA---AGA--AAAGGG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76261225 232 + 90941950 tatatttataagaatatggcaagtatattttaaaaaggaataatgtATTATTGCTCACTGAGAGTGAATAAAAGTAGAATTCCACATGAAAActctattt--tattaattgaaTTTTACATATAACAAGCAAAAATATTCTACATTAT---TTTTCTGActcatttgtcttcttttatatTAAGACCCTAGCATTGTGCTACATTAT---TCTATAAATATacgaatgaaa---aga--aaaggg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18531066 227 + 33263144 TATATTTATAAGAATATGGCAAGTATATTTTAAAAAGGAATAATGTATTATTGCTCACTGAGAGTGAATAAAAGTAGAATTCCACATGAAAAC-----TT--TATTAATTGAATTTTACATATAATAAGCAAAAATACTCTACATTAT---TTTTCTGACTCATTTGTCTTCTTTTATATTAAGACCCTAGCATTGTGCCACATTAT---TCTATAAATACACGAATGAAA---AGA--AAAGGG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198235298 236 + 210400635 TATATTTATAGGAATATGGCAAGtatttttaaaaaataaataatatattattGCTTATTGAGAGTGAATAAAGGTAGAATTCCACATGAAAACTTCAATAACTATTAATTGAATTTTACATAT---AAGCAAAAATATTCTATATTAT---TTTTCTGACTCATTTGTTTTCTTTTATATTAAGTCCCTAGCATTGTGCCACACTACTAGTCTATAAATATACAAATGAAA---GGAACAAAAGG i calJac3.chr1 C 0 C 0 s canFam3.chr10 40859367 134 - 69331447 CATATTTATAGAAATATAGCAGACG---TTAAAAAGAGAAAAATGTACTACTGCCCATTGATAGTTA--AGGAGTAGAATTTC--------------------------------------------------------------------TTTTT----------------tttttttttaagatttta--------------------tttatttattcatgaaagacacataga--gaaagg i canFam3.chr10 C 0 I 220 e mm10.chr15 77100411 1731 + 104043685 I a score=1038617.000000 s hg38.chr22_KI270876v1_alt 83484 365 + 263666 CCAGAATTGGCCTCCTCtttttt-----------------tttttttttttttttgagacagagtcttgctctgtcacccaggctggagtgcagtggcgcagtttcggctcaccacaacct-cggctcctgggttcaagtgattctcatgcctcagcctcccaagtagctgggactacaggcacgtgccaccatgcctggctagttttatacttttagtagagatggggtttcaccatgttggccaggctggtcttgaactcctaacctcaggtgatccacccgcctcagcctcccagagtgctggggattacaggcttgagccactgcgtccagccACAATTGGCCTTTTCAAAAGAATTATTGAAATTACCAGATTTAAAT s panTro4.chr22 34460985 362 + 49737984 CCAGAATTGGCCTCCTC---ttt-----------------tttttttttttttttgagacagagtcttgctctgtcacccgggctggagtgcagtggcgcagtttcggctcaccacaacct-cggctcctgggttcaagggattctcatgcctcagcctcccaagtagctgggactacaggcacgtgccaccatgcctggctagttttatacttttagtagagatggggtttcaccacgttggccaggctggtcttgaactcctaacctcaggtgacccacccgcctcagcctcccagagtgctggggattacaggcttgagccactgcgtccagccACAATTGGCCTTTTCAAAAGAATTATTGAAATTACCAGATTTAAAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30877458 360 + 46535552 CCAGAATTGGCCTCCTC-----------------------tttttttttttttttgagacagagtcttgctgtgttgcccagactggagtgcagtggcgcagttttggctcaccacaacctccgcctcctgggttcaagcgattctcgtgcctcagcctcccaagtagctgggactacaggcacgtgccaccatgcctggctggttttatacttttagtagagatggggtttcaccatgttggccagcctggtcttgaactcctaacctcaggtgatccacccacctcagcctcccaaagtgctggggattacaggcgtgagccactgcgtccagccACAATTGGCCTTTTCAAAAGAATTATTGAAATTACCAGATTTAAAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100429648 352 - 115148730 CCAGAATTGGCCTCCtt----------------------------ttttttttttgagac--agtcttgctctgtcgcccaggctggagtgcagtggcgcagtttcggctcaccacaacctccgcctcctgggttcaagcgattctcatgcttcagcctcccaagtagctgggaatacaggcatgtgccaccacacctggctagttttatacttttagtagagatggggtttcaccatgttggccaggctggtcttgaactcctaacctcaggtgatccacccacctcagcctcccaaagtgct-gggataacaggcgtgagccactgcgtccagccACAATTGGCCTTTTCAAAAGAATTATTGAAATTACCAGATTTAAAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80577592 363 + 95678458 CCAGAATTGGCCTCttc---ttc-----------------tttttttttttttttgggggaggggcttgcttttttgcccaggctggagtatagtggctcaatttcagatcaccacaacctccgcctcctgggttcaagtgatgctcatgcctcagcctcccaagtagctgggactacaggcacgcactaccatgcctggctagttttatactttcagtagagatggggtgtcaccatgttggccaggctggtcttgaactccttaccttaagtgatccacccgcctcggcctcccaaagtgctgtggattgcaggtgtgagccactgcacccagccACAACTGGTCTTTTCAAAAGAATTACTGAAATTACCAGATTTAAAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81004378 371 - 96509753 CGAGAATTGGCCTCttc---ttcttc---------ttttttttttttttttttttgagagagagtcttgctttgttgcccaggctggagtatagtggctcaatttcagctcaccacaacctccgcctcctgggttcaagtgattctcatgcctcagcctcccaagtagctgggactacaggcacgcaccaccatgcctggctagttttatactttcagtagagatggggtttcaccatgttggccaggctggtcttgaactcctgaccttaagtgatccacccgcctcggcctcccaaagtgctggggattgcaggtgtgagccactgcacccagccACAACTGGTCTTTTCAAAAGAATTACTGAAATTACCAGATTTAAAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76261457 365 + 90941950 ccAGAATTggcctcttc---ttc---------------ttcttctttttttttttgagacacagtcttgctttgttgcccaggctggagtataggggctcaatttcggctcaccacaacctccgcctcctgggttcaagtgattctcatgcctcagcctcccaagtagctgggactacaggcacgcaccaccacgcctggctagttttatactttcagtagagatgaggtttcaccatgttggccaggctggtcttgaactcctgaccttaagtgatccacccacctcggcctcccaaagtgctggggattgcaggtgtgagccactgcacccagccacaactGGCCTTTTCAAAAGAATTACTGAAATTACCAGATTTAAAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18531293 363 + 33263144 CCAGAATTGGCtttttt---ttt-----------------tttttttttttttttgagacagagtcttgctttgttgcccaggctggagtatagtggctcaatttcggctcaccacaacctccgcctcctgggttcaagtgattctcatgcctcagcctctcaagcagctgggactacaggcatgcaccaccatgcctggctagttttatactttcagtagagatggggtttcaccatgttggccaggctggtcttgaactcctgaccttaggtgatccacccgcctcggcctcccaaagtgctggggattgcaggtgtgagccactgcacccagccACAACTGGCCTTTTCAAAAGAATTACTGAAATTACCAGATTTAAAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198235534 379 + 210400635 CCAGAATTGGCCTTCTC---TCTCTCTCTCtttttttttttttttttttttttcagagacagagtcttgctctgttgcccggactagagtgtattggcacaatttcagctcaccacaacctctgcctcctgggttcaagtgattcttgtgcctcagcctcccaagtagctgggactacaggcatgcaccaccatgcccagctagtttt-tactttcataagagatggggtttcaccatgttggccaggctggtctcgaactcctgaccccaggtgatccacccacctcggcctcccaaagtgctggggattacaggtgtgagccactgtgcctagccAGAACTGGCCTTTTCATTAGAATTATTGACATTACCAGATTTAAAT i calJac3.chr1 C 0 C 0 e mm10.chr15 77100411 1731 + 104043685 I e canFam3.chr10 40859501 220 - 69331447 I a score=962567.000000 s hg38.chr22_KI270876v1_alt 83849 287 + 263666 GACTGTAAGC-AAGACATTATTCAAGTGAAAACCTATTCACTCTGATTCAATCCAATCTCTTATTCATCATTTTATGTGCTCATAAAATGCAATGTCTCTTCAATATTCCACATAAAATTCTGGCAAA-ATCTAGGTTCAAATCCTACTTGAATTGTAAGAACACAAATATTCTGCAACATCAAATTACACAAATACTGTGCAACATTTCTGCACAAATTAAGAGATTCCAACCAACCTAAATGAGAATGCTGACTGAGAATTCATTAGGAGGAACCCAACAAATTCTT s panTro4.chr22 34461347 287 + 49737984 GACTGTAAGC-AAGACATTACTCAAGTGAAAACCCATTCACTCTGATTCAATCCAATCTCTTATTCATCATTTTATGTGCTCATAAAATGCAATGTCTCTTCAATATTCCACATAAAATTCTGGCAAA-ATCTAGGTTCAAATCCTACTTGAATTGTAAGAACACAAATATTCTGCAACATCAGATTACACAAATACTGTGCAACATTTCTGCACAAATTAAGAGATTCCAACCAACCTAAATGAGAATGCTGACTGCGAATTCATTAGGAGGAACCCAACACATTCTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30877818 287 + 46535552 GACTGTAAGC-AAGACATTATTCAAGTGAAAACCCATTCACTCTGATTCAATCCAATCTCTTATTCATCATTTTATGTGCTCATAAAATGCAATGTCTCTTCAATATTCCACATAAAATTCGGGCAAA-ATCTAGGTTCAAATCCTACTTGAATTGTAAGAGCACAAATATTCTGCAACATCAAATTACACAAATACTGTGCAACATTTCTGCACAAATTAAGAGATTCCAACCAACCTAAATGAGAATGCTGACTGAGAATTCATTAGGAGGAACCCGACACATTCTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100430000 287 - 115148730 GACTGTAAGC-AAGACATTATTCAAGTGAAAACCCATTCACTCTGATTCAATCCAATCTCTTATTCATCATTTTATGTGCTCATAAAATGCAATGTCTCTTCAATATTCCACATAAAATTTTGGCAAA-ATCTAGGTTCAAATCCTACTTGAATTGTAAGAGCACAAATATTCTGCAACATCAAATTACACAAATACTGTGCAACATTTCTGCACAAATTAAGAGATTCCAACCAACCTAAATGAGAATGCTGACTGAGAATTCATTAGGAGGAACCCAACACATTCTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80577955 287 + 95678458 GACCGTAAGC-AAAACATTATTCAAGTGAAAATCCATTCACTCTGATTCAATCCAACCTCTTATTCATCATTTTATGTGCTCATAAAATGCAATGTCTCTTCAATATTCCACATAAAATTTTGGCAAA-ATTTGGGCGCAAATACCACTTGAATTGTAAGAGCACAAATATTCTGCAATATCAAATTACACAAATACTGTGCAACATTTCTGCACAAATTAAGAGATTCCGACCAACCTAAATGAGAATGCTGACTGAGAATTCATTAGGACGAACCCAACACATTCTC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81004749 287 - 96509753 GACCGTAAGC-AAAACATTATTCAAGTGAAAATCCATTCACTCTGATTCAATCCAACCTCTTATTCATCATTTTATGTGCTCATAAAATGCAATGTCTCTTCAATATTCCACATAAAATTTTGGCAAA-ATTTGGGCGCAAATACCACTTGAATTGTAAGAGCACAAATATTCTGCAATATCAAATTACACAAATACTGTGCAACATTTCTGCACAAATTAAGAGATTCCGACCAACCTAAATGAGAATGCTGACTGAGAATTCATTAGGACGAACCCAACACATTCTC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76261822 287 + 90941950 GACCGTAAGC-AAAACATTATTCAAGTGAAAATCCATTCACTCTGATTCAATCCAACCTCTTATTCATCATTTTATGTGCTCATAAAATGCAAAGTCTCTTCAATATTCCACATAAAATTTTGGCAAA-ATTTGGGTGCAAATACCACTTGAATTGTAAGAGCACAAATATTCTGCAATATCAAATTACACAAATACTGTGCAACATTTCTGCACAAATTAAGAGATTCCAACCAACCTAAATGAGAATGCTGACTGAGAATTCATTAGGACGAACCCAACACATTCTC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18531656 285 + 33263144 GACCGTAAGC-AAAACATTATTCAAGTGAAAATTCATTCACTCCGATTCAATCCAACCTCTTATTCATCATTTTATGTGCTCATAAAATGCAATGTCTCTTCAATATTCCACATAAAATTTTGGCAAA-ATTTGGGTGCAAATACTACTTGAATTGTAAGAGCACAAATATTCTGCAATATCAAATTACACAAATACTGTGCAACATTTCTGCACAAATT--GAGATTCCAACCAACCTAAATGAGAATGCTGACTAAGAATTCATTAGGATGAACCCAACACATTCTC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198235913 288 + 210400635 GACTATAAGCAAAGACATTATTCAAATGAAAACTCATTCGGTCTGATTCAATCCAAGTTCCTGTTCATCATTTTATGTGCTCATAAAATGCAATGTCTTTTCAATATTCTACATAAAATGTTGGTAAA-ATCTAGGTTCAAATCCTACTTGAATTGTAAGAGCAAAAATATTCTGCAATATCAAATTACACTAATACTGTGCAACATTCCTGCACAAATTAAGAGATTCCAACCAACCCAAATGAGAATGCTCACTGGGAAATCATTAGGAGGAACCCAGCACAGTCTT i calJac3.chr1 C 0 I 76 s canFam3.chr10 40859721 244 - 69331447 GACTG------GAGACAGTATTCAAGAGAAAACTCATTCATCCTGAACCAATCTAACC-CCCGTTCATTATTTTATGTGCTCATAGATGGTGAA-----CACATGATTTTACATAAAAATTGGGCAAATACCTCAGTTCAAATGTTACTGGAGTTGTAAGAACACAAATGTTCTACAATGTCAG-----------------------------ACAAATCAAGTGATTCCAACCAATGTAAACTAAATCGCTGA----GACTTCACTAGAAGGCATCTAGCGCACTCTT i canFam3.chr10 I 220 C 0 e mm10.chr15 77100411 1731 + 104043685 I a score=85251.000000 s hg38.chr22_KI270876v1_alt 84136 33 + 263666 CTTAGGACCTTTAA--CACAA-TAGCAGAAGGTTTC s panTro4.chr22 34461634 33 + 49737984 CTTAGGACCTTTAA--CACAA-CAGCAGAAGGTTTC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30878105 30 + 46535552 CTTAGGACCTTTAA--CATAA-CAGC---AGGTTTC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100430287 33 - 115148730 CTTAGGACCTTTAA--CACAA-TAGCAGAAGGTTTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80578242 33 + 95678458 CTTAGGACCTTTAA--CACAA-TAGCAGAAGGTTTC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81005036 33 - 96509753 CTTAGGACCTTTAA--CACAA-TAGCAGAAGGTTTC i macFas5.chr10 C 0 I 108 s papAnu2.chr10 76262109 33 + 90941950 CTTAGGACCTTTAA--CACAA-TAGCAGAAGGTTTC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18531941 33 + 33263144 CTTAGGACCTTTAA--CACAA-TAGCAGAAGGTTTC i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40859965 36 - 69331447 TTCAGAAGCTTTAAACCACAAGCAGCTGTTGGTCTC i canFam3.chr10 C 0 I 6 e mm10.chr15 77100411 1731 + 104043685 I e calJac3.chr1 198236201 76 + 210400635 I a score=115515.000000 s hg38.chr22_KI270876v1_alt 84169 39 + 263666 TTGCCT--ACTAAACCTGAATATTAATTTAGAATAATATTT s panTro4.chr22 34461667 39 + 49737984 TTGCCT--ACTAAACCTGaatattaatttagaataatattt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30878135 39 + 46535552 TTGCCT--ACTAAACCTGaatattaatttagaataatattt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100430320 39 - 115148730 TTGCCT--ACTAAACCTGAATATTAATTTAGAATAATATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80578275 39 + 95678458 TTGCCT--ACTAAACCTGAATACTAATTTAAAATAATATTT i rheMac3.chr10 C 0 I 432 s macFas5.chr10 81005177 39 - 96509753 TTGCCT--ACTAAACCTGAATATTAATTTAGAATAATATTT i macFas5.chr10 I 108 C 0 s papAnu2.chr10 76262142 39 + 90941950 TTGCCT--ACTAAACctgaatattaatttaaaataatattt i papAnu2.chr10 C 0 I 426 s chlSab2.chr19 18531974 39 + 33263144 TTGCCT--ACTAAACCTGAATATTAATTTAAAATAATATTT i chlSab2.chr19 C 0 I 422 s canFam3.chr10 40860007 41 - 69331447 TTGGCTTGGTTAGGCTTGAGtattaatttagaataatattt i canFam3.chr10 I 6 C 0 e mm10.chr15 77100411 1731 + 104043685 I e calJac3.chr1 198236201 76 + 210400635 I a score=755.000000 s hg38.chr22_KI270876v1_alt 84208 1 + 263666 T s panTro4.chr22 34461706 1 + 49737984 t i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30878174 1 + 46535552 t i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100430359 1 - 115148730 T i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81005216 1 - 96509753 C i macFas5.chr10 C 0 C 0 s canFam3.chr10 40860048 1 - 69331447 t i canFam3.chr10 C 0 C 0 e mm10.chr15 77100411 1731 + 104043685 I e calJac3.chr1 198236201 76 + 210400635 I e rheMac3.chr10 80578314 432 + 95678458 I e papAnu2.chr10 76262181 426 + 90941950 I e chlSab2.chr19 18532013 422 + 33263144 I a score=13289.000000 s hg38.chr22_KI270876v1_alt 84209 13 + 263666 AAAAAATAACCTT s panTro4.chr22 34461707 13 + 49737984 aaaaaataaCCTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30878175 13 + 46535552 taaaaataaCCTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100430360 13 - 115148730 AAAACATAACCTT i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81005217 13 - 96509753 AAAAAAGAACTTT i macFas5.chr10 C 0 I 310 s papAnu2.chr10 76262607 9 + 90941950 aaaaaaaaa---- i papAnu2.chr10 I 426 C 0 s canFam3.chr10 40860049 13 - 69331447 aaaaaatGACTTT i canFam3.chr10 C 0 C 0 e mm10.chr15 77100411 1731 + 104043685 I e calJac3.chr1 198236201 76 + 210400635 I e rheMac3.chr10 80578314 432 + 95678458 I e chlSab2.chr19 18532013 422 + 33263144 I a score=7744.000000 s hg38.chr22_KI270876v1_alt 84222 4 + 263666 TTTC s panTro4.chr22 34461720 4 + 49737984 TTTC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30878188 4 + 46535552 TTTC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100430373 4 - 115148730 TTTC i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81005540 4 - 96509753 TTTG i macFas5.chr10 I 310 C 0 s papAnu2.chr10 76262616 4 + 90941950 tttg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18532435 4 + 33263144 TTTC i chlSab2.chr19 I 422 C 0 s canFam3.chr10 40860062 4 - 69331447 TTTC i canFam3.chr10 C 0 C 0 e mm10.chr15 77100411 1731 + 104043685 I e calJac3.chr1 198236201 76 + 210400635 I e rheMac3.chr10 80578314 432 + 95678458 I a score=114120.000000 s hg38.chr22_KI270876v1_alt 84226 40 + 263666 TTTCCTACCAATGCCACTATTGCCTGAGCATTCCCTTTAA s panTro4.chr22 34461724 40 + 49737984 TTTCCTACCAATGCCACTGTTTCCTGAGCATTCCCTTTAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30878192 40 + 46535552 TTTCCTACCAATGCCACTGTTTCCTGAGCATTCCCTTTAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100430377 40 - 115148730 TTTCCTACCAATGCCACTATTTCCTGAGCATTCCCTTTAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80578746 40 + 95678458 TTTCCTACCAATGGCACTATTTCCTGGGCATTCCCTTTAA i rheMac3.chr10 I 432 C 0 s macFas5.chr10 81005544 40 - 96509753 TTTCCTACCAATGGCACTATTTCCTGGGCATTCCCTTTAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76262620 40 + 90941950 tttcctaCCAATGGCACTATTTCCTGGGCATTCCCTTTAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18532439 40 + 33263144 TTTCCTACCAATGGCATTATTTCCTGGGCATTCCCTTTAA i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40860066 39 - 69331447 -TTCCTGCAAATGGCACCATTACTTAAGCATTCCCTTAAG i canFam3.chr10 C 0 I 24 e mm10.chr15 77100411 1731 + 104043685 I e calJac3.chr1 198236201 76 + 210400635 I a score=125104.000000 s hg38.chr22_KI270876v1_alt 84266 50 + 263666 ATCCACATAATgggcaggcaccgtagctcaagcctgtaatcccagcactt s panTro4.chr22 34461764 50 + 49737984 ATCCACATAATgggcaggcaccgtagctcaagcctgtaatcccagcaatt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30878232 50 + 46535552 ATCCACATAATgggcaggcactgtggctcaagcctgtaatcccagcactt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100430417 50 - 115148730 ATCCACATACTgggcaggtaccgtggctcaagcctgtagtcccagcactt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80578786 50 + 95678458 ATCCACATAATgggcgggcaccgtggctcaagcctgtaatcccagcactt i rheMac3.chr10 C 0 I 44 s macFas5.chr10 81005584 50 - 96509753 ATCCACATAATgggcgggcaccgtggctcaagcctgtaatcccagcactt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76262660 50 + 90941950 ATCCACATAATGGgcgggcaccgtggctcaagcctgtaatcccagcactt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18532479 50 + 33263144 ATCCACATAATgggcgggcaccgtggctcaagcctgtaatcccagcactt i chlSab2.chr19 C 0 C 0 e mm10.chr15 77100411 1731 + 104043685 I e canFam3.chr10 40860105 24 - 69331447 I e calJac3.chr1 198236201 76 + 210400635 I a score=107435.000000 s hg38.chr22_KI270876v1_alt 84316 64 + 263666 tgggaggctgaggcggagggatcacctgagtctaggagctcgagaccagcctggccaacatggc s panTro4.chr22 34461814 57 + 49737984 tg-------gaggcagagggatcacctgagtctaggagttcgagaccagcctggccaacatggc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30878282 64 + 46535552 tgggaggctgaggtggacggatcacctgagtctaggagttcgagaccagcctggccaacatggc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100430467 64 - 115148730 tgggaggctgaggcggacggatcacctgagtctaggagttcgagaccagcctggccaacatggc i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81005634 64 - 96509753 cggaaggctgaggtggacggatcacctgagtctagaagttcgagaccagcctggccaacgtgac i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76262710 64 + 90941950 cggaaggctgaggtggacggatcacctgagtctagaagttcgagaccagcctggccaacgtcac i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18532529 64 + 33263144 cggaagactgaggtggacggatcacctgagtctagaagttcgagaccagcctggccaacgtgac i chlSab2.chr19 C 0 C 0 e mm10.chr15 77100411 1731 + 104043685 I e canFam3.chr10 40860105 24 - 69331447 I e calJac3.chr1 198236201 76 + 210400635 I e rheMac3.chr10 80578836 44 + 95678458 I a score=363183.000000 s hg38.chr22_KI270876v1_alt 84380 196 + 263666 aaaacctcgtctctactaaaaat-acaaaaattagccggatgtggtggcacacacctgtaatcccagctactctggaggctgaggcacgagtatcgcttgaacccgggaagtggaggttgcagtgagctgagatcgcaccactgtactccagcctaggtg-acagagagactctgcctcaaaacaaaaacaaaaaTCA s panTro4.chr22 34461871 107 + 49737984 aaaacctcgtctctactaaaaat-acaaaaa-----------------------------------------------------------------------------------------nnnnnnnnnnagatcgcacctctgtactccagcctaggtg-acaaagagactctgcctcaaaacaaaaacaaaaaTTA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30878346 196 + 46535552 aaaacctcgtctctactaaaaat-acaaaaattaggggggtgtggtggcacacatctgtaatcccagctactctggaggctgaggcacgagaatcgcttgaacccaggaaatggaggttgcagtgagccgagatcgcaccactgtactccagcctaggtg-acagacagacactgcctcaaaacaaaaacaaaaaTTA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100430531 197 - 115148730 aaaacctcatctctactaaaaataacaaaaattagcggggtgtagtggcacacacctgtaatcccagctactctggaggctgaggcacgagaatcgcttgaacccaggaagtggaggttgcagtgagccgatattgcaccactgtactccagcctaggtg-acagagagactctgcctcaaaacaaaaacaaaaaTTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80578880 197 + 95678458 aaaaccctgtctctattaaaaat-acaaaaattagccgagtgtggtggtgcacacctggattcccagctactcaggaggctgaggcaggagaattacttgaacccccaaggtggaggttgcagtgagctgagatcgcaccactgtactccagcctaggagtacagagagactctctcccaaaacaaaaacaaaaaTTA i rheMac3.chr10 I 44 C 0 s macFas5.chr10 81005698 197 - 96509753 aaaacctcgtctctactaaaaat-acaaaaattagccgggtgtggtggcacacacctgtaatcccagctactctggaggctgaggcacgagaattgcttggacccaggaagtggaggttgcagtgagctgagatcgcaccactgtactccagcctaggagtacagagagactctctcccaaaacaaaaacaaaaaTTA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76262774 196 + 90941950 aaaacctcgtctctactaaaaat-acaaaaattagccgggtgtggtggcagacacctataatcccagcttctctggaggctgaggcacgagaattgcttggacccaggaagtggaggttgcagtgagctgagatcgcaccactgtactccagcctaggtg-acagagagactctctcccaaaacaaaaacaaaaatta i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18532593 196 + 33263144 aaaacctcgtttctactaaaaat-acaaaaattagccaggtgtggtggcacacacttgtaatcccagctactctggaggctgaggcacgagaatcgcttggacccaggaagcggaggttgcagtgagctgagattgcaccactgtactccagcctaggtg-agagagagactctctcccaaaacaaaaacaaaaaTTA i chlSab2.chr19 C 0 C 0 e mm10.chr15 77100411 1731 + 104043685 I e canFam3.chr10 40860105 24 - 69331447 I e calJac3.chr1 198236201 76 + 210400635 I a score=583980.000000 s hg38.chr22_KI270876v1_alt 84576 218 + 263666 ATATAATGGATGTATATTGACATGTTGTtagtaatactttgaatatatttagttttagaaaatttacaatgtatt--------------ttcacagatgccctttgaccttcacaaaacccaaagaggaaggtaaaatagataCCACATCTGCAATCTGAGGTCAATACTATACTTTTCTGGGTCTCATTTCCT-AATAATAAGCT--GGGAGGGTTGAGTTTCAATAATTTCT-T- s panTro4.chr22 34461978 218 + 49737984 ATATAATGGATGTATATTGACATGTTGTtagtaatactttgaatatatttagttttagaaaatttacaatgtatt--------------ttcacagatgtcctttgaccttcacaaaacccaaagaggaaggtaaaatagataCCACATCTGCAATCTGAGGTCAATACTATACTTTTCTGGGTCTCATTTCCT-AATAATAAGCT--GGGAGGGTTGAGTTTCAATAATTTCT-A- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30878542 218 + 46535552 ATATAATGGATGTATATTGATATGTTGTTAGTAATACTTTGAATATACTTAGTTTTAGGAAATTTACAATGTATT--------------TTCACAGAAGTCCTTTGACCTTCACAAAACCCAAAGTGGAAGGTAAAATAGATACCACATCTGCAATCTGAGGTCAATACTATACTTTTCTGGGTCTCATTTCCT-AATAATAAGCT--GGGAGGGTTGAGTTTCAATAATTTCT-A- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100430728 218 - 115148730 ATATAATGGATGTATATTGATATGTTGTtagtaatactttgaatatatttagttttagaaaatttacgatgtatt--------------ttcacagatgtcctttgaccttcacaaaacccaaagaggaaggtaaaatagatatcaCATCTGCAACCTGAGGTCAATACTATACTTTTCTGGGTCTCATTTCCT-AATAATAAGCT--GGGAGGGTTGAGTTTTAATAACTTCT-A- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80579077 217 + 95678458 ATATAATGGATGTATATTGATATGCTGTTAGCAATACTTTGAATATATTTAGTTTTAGACAA-TTATAATATATT--------------TTCACAAATGTCTTTTGACCTGCACAAAACCCAAGGAGGAAGGTAAAACAGATACCACATCtgcaatctgaggtcaatattatacttttctgggtctcatttcct-aataataagct--gggagggttgagtttcaataatttct-a- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81005895 217 - 96509753 ATATAATGGATGTATATTGATATGCTGTTAGCAATACTTTGAATATATTTAGTTTTAGACAA-TTATAATGTATT--------------TTCACAAATGTCTTTTGACCTGCACAAAACCCAAGGAGGAAGGTAAAACAGATACCACATCTGCAATCTGAGGTCAATATTATACTTTTCTGGGTCTCATTTCCT-AATAATAAGCT--GGGAGGGTTGAGTTTCAATAATTTCT-A- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76262970 217 + 90941950 atataatggATGTATATTGATATGCTGTTAGCAATACTctgaatatatttagttttagaCAA-TTATAATGTATT--------------TTCACAAATGTCTTTTGACCTGCACAAAACCCAAGGAGGAAGGTAAAACAGATACCACATCTGCAATCTGAGGGCAATATTATACTTTTCTGGGTCTCATTTCCT-AATAATAAGCT--GGGAGGGTTGAGTttcaataatttct-a- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18532789 218 + 33263144 ATATAATGGATGTATATTGATATGCTGTTAGCAATACTTTGAATATATTTAGTTTTAGACAA-TTATAATGTATT--------------TTCACAAATGTCCTTTGACCTGCACAAAACCCAAGGAGGAAGGTAAAACAGATACCACATCtgcaatctgaggtcagtattatacttttctgggtctcatttcct-aataataagct--gggagggttgagtttcaataatttctaa- i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40860129 218 - 69331447 ATGTAATGG-----------TATGCTGTCAATAATACTTTGAGTACGTTTAGTTTTT------TTTTTGTATGTTTGGTTTTGTACAAATTTACA-ATGTATTTTGACCTTCACAAAACCCAAGGGGAGAGGTAAGATAGGTACCACATCTGGGACAATGAATAAGTACTATACTTCTTTGGGCTTAATTTCCTAAATAATAAGCTAAGAGAGGGCTGGATTTTGATGACTTCT-AT i canFam3.chr10 I 24 C 0 e mm10.chr15 77100411 1731 + 104043685 I e calJac3.chr1 198236201 76 + 210400635 I a score=1635962.000000 s hg38.chr22_KI270876v1_alt 84794 492 + 263666 AAAAAATCCTGGTGCCAAAAATCTGTGGTc-tcaatttataaatatgaaaacagaattaggtt---aaaaa-actggtccactgtcacggagtaaataaagagtcaaacctagaaggagaacgtctgttttctgaattccagtcagaggctctttctgtcacaatatttccctTAGATGTAAAGAAAATTTGACATTCTTTGCCTCTCCTTTCTATTTTGTTTACTTTGAGTTTTTATCAAAATTGTAGAGACTTGTTTTTG-TAAGAGCAGTG---AAAAGAAAATAAGAGGTAAAGTGGGAGGCAGTGGTATCA----------TACCGATAAAAGGAGTAAGGAAAAATGCAAATTATGCTGATAA---------------ATTTGTATCATCTATGTGAAAAGCTGGGCTAAATATATTTATTGAAGACTTTATGGGATATAGTCAATACGGATACATTTCTCCTTGATTTAAGACATTATTAGCACATACAGC-CATACTCTAGCAGTGGGTTCAAACTTTT s panTro4.chr22 34462196 492 + 49737984 AAAAAATCCTGGTGCCAAAAATCTGTGGTc-tcaatttataaatatgaaaacagaattaggtt---aaaaa-actggtccactgtcacggagtaaataaagagtcaaacctagaaggagaacgtctgttttctgaattccagtcagaggctctttctgtcacaatatttcccttAGATGTAAAGAAAATTTGACATTCTTTGCCTCTCCTTTCTATTTTGTTTACTTTGAGTTTTTATCAAAATTGTAGAGACTTGTTTTTG-TAAGAGCAGTG---AAAAGAAAATAAGAGGTAAAGTGGGAGGCAGTGGTATCA----------TACCGATAAAAGGAGTAAGGAAAAATGCAAATTATGCTGATAA---------------ATTTGTATCATCTATGTGAAAAGCTGGGCTAAATATATTTATTGAAGACTTTATGGGATATAGTCAATACGGATACATTTCTCCTTGATTTAAGACATTATTAGCACATACAGC-CATACTCTAGCAGTGGGTTCAAACTTTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30878760 482 + 46535552 AAAAAATCCTGGTGCCAAAAATCTGTGGTc-tcaatttataaatatgaaaacagaattaggtt---aaaaa-actggtccactgtcacggagtaaataaagagtcaaacctagaaggagaatgtctgttttctgaattccagtcagaggctctttctgTCACAATATTTCCCTTAGATGTAAAGAAAATTTGACATTCTTTGCCTCTCCTTTCTATTTTGTTTA-----AGTTTTTATCAAAATTGTAGAGACTTGTTTTTG-TAAGAGCAGT--------GAAAATAAGAGGTAAAGTGGGAGGCAGTAGTATCA----------TACCGATAAAAGGAGTAAGGAAAAATGCAAATTATGCTGATAA---------------ATTTGTATCATCTATGTGAAAAGCTGGGCTAAATATATTTATTGAAGACTTTATGGGATATAGTCAATACGGATACATTTCTCCTTGATTTAAGACATTATTAGCACATATAGC-CATACTCTAGCAGTGGGTTCAAACTTTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100430946 485 - 115148730 GAAAAATCCTGGTGCCAAAAATCTGTGGTc-tcaatttagaaatatgaaaacagaattaggtt---aaaaa-actggtccactgtcacggagtaaataatcagtcaaacctagaaggagaatgtctgttttctgaattccagtcagaggctctttctgTCACAATATTTCCCTTAGATGTAAAGAAAATTTGACATTCTTTGCCTCTCCTTTCTATTTTGTTTG-----AGTTTTTATCAAAATTGTAGAGACTTGTTTTCG-TAAGAGCAGTG---AAAAGAAAATAAGAGGTAATGTGGGAGGCAGTGGTATCA----------TACTGATAAAAGGAGTAAGGAAAAATGCAAATTATGCTGATAA---------------ATTTGTATCATCTATGTGAAAAGCTGGGCTAAATATATTTATTGAAGAC--TATGGGATATAGTCAATACTGATACATTTCTCCTTGATTTAAGACATTATTAGCACATATAGC-CACACCCTAGCAGTGGGTTCAAACTTTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80579294 486 + 95678458 aAAAAATCCTGGTGCCAAAAATCTGTGGTc-ttaatttataaatacgaaaacagaatcaggtt---aaaaa-actggtccactgtcacggagtaaataaagtgtcaaacctagaagcagaatgtctgctttctgaattccagtcagaggcgctttctgtcacagtatttctcccagAAGTAAAGAAAATTTGACATTCTTTGCCTCTCCTTTCTATTTTGTTTACTTTGAGTTTTTATCAAAATTGTAGAGACTTGTTTTTG-TAAGAACAGTG---AAAAGAAAATAAAAGTTAAAGTGGGAGGCAGTGGTATCA----------TACCGATAAAAGGAGT-AGGAAAAATGCAAATTATGCTGATAA---------------ATTTGTATCATCTCTGTGAAAAGCTGGGCTGAATATATTTATTGAAGACTTTATGGGATATAGTCAATACCAATATGTTTCTTC-----TTAAGACATTAGTGGCACATACAGC-CACACTCTAACAGTAGGTTCAAACTTTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81006112 486 - 96509753 AAAAAATCCTGGTGCCAAAAATCTGTGGTC-TTAATTTATAAATACGAAAACAGAATCAGGTT---AAAAA-ACTGGTCCACTGTCACGGAGTAAATAAAGTGTCAAACCTAGAAGCAGAATGTCTGTTTTCTGAATTCCAGTCAGAGGCGCTTTCTGTCACAGTATTTCTCCCAGAAGtaaagaaaatttgacattctttgcctctcctttctattttgtttactttgagtttttatcaaaatTGTAGAGACTTGTTTTTG-TAAGAACAGTG---AAAAGAAAATAAAAGTTAAAGTGGGAGGCAGTGGTATCA----------TACCGATAAAAGGAGT-AGGAAAAACGCAAATTATGCTGATAA---------------ATTTGTATCATCTCTGTGAAAAGCTGGGCTGAATATATTTATTGAAGACTTTATGGGATATAGTCAATACCAATACGTTTCTTC-----TTAAGACATTAGTGGCACATACAGC-CACACTCTAACAGTAGGTTCAAACTTTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76263187 486 + 90941950 aaaaaatcCTGGTGCCAAAAATCTGTGGTC-TTAATTTATAAATACGAAAACAGAATCAGGTT---aaaaa-aaTGGTCCACCGTCACGGAGTAAATAAGGTGTCAAACCTAGAAGCAGAATGTCTGTTTTCTGAATTCCAGTCAGAGGCTCTTTCTGTCACAGTATTTCTCCCAGAAGTAAAGAAAATTTGacattctttccctctcctttctattttgtttactttgaGTTTTTATCAAAATTGTAGAGACTTGTTTTTG-TAAgaacagtg---aaaagaaaataaaagttaaagtgGGAGGCAGTGGTATCA----------TACCGATAAAAGGAgt-aggaaaaatgcaaattatgctGATAA---------------ATTTGTATCATCTATGTGAAAAGCTGggctaaatatatttattgaagacTTTATGGGATATAGTCAATACCAATACGTTTCTTC-----TTAAGACATTAGTGGCACATACAGC-CACACTCTAACAGTAGGTTCAAACTTTT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18533007 486 + 33263144 AAAAAATCCTGGTGCCAAAAATCTGTGATc-ttaatttataaatacgaaaacagaatcaggtt---aaaaa-actggtccactgtcacggagtaaataaagtgtcaaacctagaagcagaatgtctgttttctgaattccagtcagaggctctttctgtcacagtatttctcccagAAGTAAAGAAAATTTGACATTCTTTGCCTCTCCTTTCTATTTTGTTTACTTTGAGTTTTTATCAAAATTGTAGAGACTTGTTTTTG-TAAGAACAGTG---AAAAGAAAATAAGAGTTAAAGTGGGAGGCAGTGGTATCA----------TACCGATAAAAGGAGT-AGGAAAAATGCAAATTATGCTGATAA---------------ATTTGTATCATCTATGTGAAAAGCTGGGCTAAATATATTTATTGAAGACTTTATGGGATATAGTCAATACCAATACGTTTCTTC-----TTAAGACATTATTGGCACATACAGC-CACACTCTAACAGTAGGTTCAAACTTTT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198236277 488 + 210400635 aaaaaaCCCTGGTGCCAAAAATCTGTGGTc-ttaatttataaatatgaaaacagaattaggttaaaaaaaa-aattgtctactgtcacaaagtaaa----gagtcaaacctagaagtagaatttctgttttctgaattccagtcagaggctctttctacCACAATATTTTCCCTAGATGTACATACAATCTGACATTCTTTGCCTCTCCTTTCTATTTTGTTTACGTTGAGTTTCTATCAAAGTTGTAGAGACTTGTTTTTG-TAAGAGCAGTG---AAAAGAAAGTCAGAGGTACAGTGGGAGGTGGTGGTAGCA----------TATTTATAAAAGGAGT-AGGAAAAATGCAACCTATGCTGATAA---------------ATTTGCATGATCTATGTGAAAAGCTGGGCTAAATGTATTTATTAAAGAC--TATGGGATATAGTTAATACTAATACTTTTCTCCTTGACTGAAGACATTATTGGCACATATAGC-CACACTCTAGCAGTAGGTGTAAACTTTT i calJac3.chr1 I 76 C 0 s canFam3.chr10 40860347 507 - 69331447 AGAGGCTTCAGGTGCTAAAATTCTGTGatcaccaattaagagagatgaaaacagaatcaggtt---aaaaagattggtccactg--acagagtaaa--atgagtcaaatctagaagtagaatttctgtcttctcaattctagtcagtgactctttctaccacagcattctccctGGATCTAAAGGAAATGTAA----CTTTGCCTCTCCTTCCTATTTTGTTTACA-TGAGTTATTATCAAAATTGCAGAAACTTGTTTTTGTTATGGGCATTGAAAAAAAAAAAACAAGAGGTAAAGGGGGAGGCAGTGGTATCACAAGATAGACCATTGATAAATGG-GT-AGGCAAAATGTAAATTATGCTGATAAATGCAAATTATGCTGATTTGTACCATCTGTTTGAGAAGCTGGGCTAAATCTATCTATTGGAGACATCATGGAATATACT-AAGATTCTTACACTTGATT-----TTAGGACATTACCAGCAAATACAATACTTATCTAAGCAGTAGATTCAAACtttt i canFam3.chr10 C 0 I 218 e mm10.chr15 77100411 1731 + 104043685 I a score=2300.000000 s hg38.chr22_KI270876v1_alt 85286 1 + 263666 T s panTro4.chr22 34462688 1 + 49737984 T i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30879242 1 + 46535552 T i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100431431 1 - 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80579780 1 + 95678458 T i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81006598 1 - 96509753 T i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76263673 1 + 90941950 T i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18533493 1 + 33263144 C i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198236765 1 + 210400635 T i calJac3.chr1 C 0 C 0 e mm10.chr15 77100411 1731 + 104043685 I e canFam3.chr10 40860854 218 - 69331447 I a score=12712.000000 s hg38.chr22_KI270876v1_alt 85287 7 + 263666 AAAAAAA s panTro4.chr22 34462689 7 + 49737984 AAAAAAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30879243 7 + 46535552 AAAAAAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100431432 7 - 115148730 AAAAAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80579781 7 + 95678458 ACAAAAG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81006599 7 - 96509753 ACAAAAG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76263674 7 + 90941950 ACAAAAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18533494 7 + 33263144 ACAAAAG i chlSab2.chr19 C 0 C 0 e mm10.chr15 77100411 1731 + 104043685 I e canFam3.chr10 40860854 218 - 69331447 I e calJac3.chr1 198236766 0 + 210400635 C a score=151584.000000 s hg38.chr22_KI270876v1_alt 85294 299 + 263666 CAGCAGAgccaggcatggtggctcacgcctgtaatcccagcactttgggaggccacggtgggcggatcacgaggtcaggaggttgagaccatcctggctaacacggtgaaacccca---------------------------------tctctactaaaaatacaaaaaattagccaggtgtggtggcgggcgcctgtagtcccagctactcgggaggctgagggcaggagaatggcgtgaacctgggaagcagagcttgcagtgagccttgattgcgccagtgcactccagcctgggtgacaaagcgagactccgtctc-----------aaaaaaaaaaa s panTro4.chr22 34462696 310 + 49737984 CAGCAGAgccaggcatagtggctcacgcctgtaatcccagcactttgggaggccacggtgggtggatcacgaggtcaggagattgagaccatcctggctaacacggtgaaacccca---------------------------------tctctactaaaaacacaaaaaattagccgggtgtggtggcgggcgcctgtagtcccagctactcgggaggctgagggcaggagaatggcgtgaacctgggaagcggagcttgcagtgagccttgattgcgccagtgcactgcagcctgggtgacaaagcgagactccgtctcaaaaaaaaaaaaaaaaaaaaaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30879250 299 + 46535552 CAGCAGagccaggcatggtggctcacgcctgtaatcccaacactttgggaggccaaggtgggtggatcacgaggtcaggagattgagaccatcttggctaacacggtaaaacccca---------------------------------tctctactaaaaatacaaaaaattagccgggtgtggtggcgggcgcctgtagtcccagctactcgggaggctgagggcaggagaatggcgtgaacctgggaagcggagcttgcagtgagccttgactgcgccactgcactccagcctgggtgacaaagcgagactccatctc-----------aaaaaaaaaaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100431439 327 - 115148730 CAGCAGAgccgggcacagtggctcatgcctgtaatcccagcactttgggaggccaaggtgggtggatcacaaggtcaggagattgagaccatcctggctaacacggtgaaaccccatctctactaaaaatacaaaaaattagccaggtgtctctactaaaaatacaaaaaattagccgggtgtggtggcgggctcctgtagtcccagctactcgggaggctgagggcaggagaatggtgtgaacccaggaggcagagcttgcagtgagccttgactgcgccactgcactccagcctgggtgacaaggcgagagtccgtctc----------------aaaaaa i nomLeu3.chr7b C 0 C 0 e mm10.chr15 77100411 1731 + 104043685 I e canFam3.chr10 40860854 218 - 69331447 I e calJac3.chr1 198236766 0 + 210400635 C e rheMac3.chr10 80579788 0 + 95678458 C e papAnu2.chr10 76263681 0 + 90941950 C e macFas5.chr10 81006606 0 - 96509753 C e chlSab2.chr19 18533501 0 + 33263144 C a score=7567.000000 s hg38.chr22_KI270876v1_alt 85593 11 + 263666 aaaaaaaaCTC s panTro4.chr22 34463006 11 + 49737984 aaaaaaaaaCC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30879549 11 + 46535552 aaaaaaaaaCC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100431766 11 - 115148730 aaaaaaaaaCC i nomLeu3.chr7b C 0 C 0 s calJac3.chr1 198236766 10 + 210400635 -AAAAAAAATT i calJac3.chr1 C 0 C 0 e mm10.chr15 77100411 1731 + 104043685 I e canFam3.chr10 40860854 218 - 69331447 I e rheMac3.chr10 80579788 0 + 95678458 C e papAnu2.chr10 76263681 0 + 90941950 C e macFas5.chr10 81006606 0 - 96509753 C e chlSab2.chr19 18533501 0 + 33263144 C a score=2800.000000 s hg38.chr22_KI270876v1_alt 85604 1 + 263666 C s panTro4.chr22 34463017 1 + 49737984 C i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30879560 1 + 46535552 C i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100431777 1 - 115148730 C i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80579788 1 + 95678458 C i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81006606 1 - 96509753 C i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76263681 1 + 90941950 C i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18533501 1 + 33263144 C i chlSab2.chr19 C 0 C 0 e mm10.chr15 77100411 1731 + 104043685 I e canFam3.chr10 40860854 218 - 69331447 I e calJac3.chr1 198236776 0 + 210400635 C a score=571789.000000 s hg38.chr22_KI270876v1_alt 85605 178 + 263666 AGCAGAAACT-CCCCCCTTTATTCTAGATATTAGTAAAAGCTTATGCAGAACCCT-AATTGCTCAGACTAAAGTACAGCTG-AGACCTCAGAATTCAATCCATTTGGTTTCCTTT----TTCTCTCCCAAACTGGCTCTGCAGA--ACAGTCTGCAAAACCACCACTGGGCTACAGATTAA-----------------------ATTTAT s panTro4.chr22 34463018 179 + 49737984 AGCAGAAACT-CCTCCCTTTATTCTAGATATTAGTAAAAGCTTATGCAGAACCCTAAATTGCTCAGACTAAAGTACAGCTG-AGACCTCAGAATTCAATCCACTTGGTTTCCTTT----TTCTCTCCCAAACTGGCTCTGCAGA--ACAGTCTGCAAAACCACCACTGGGCTACAGATTAA-----------------------ATTTAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30879561 180 + 46535552 AGCAGAAACTCCCCCCCTTTATTCTAGATACTAGTAAAAGCTTATGCAGAACCCTAAATTGCTCAGACTAAAGTACAGCTG-AGACCTCAGAATTCAATCCATTTGGTTTCCTTT----TTCTCTCCCAAACTGGTTCTGCAGA--ACAGTCTGCAAAACCACCATTGGGCTACAGATTAA-----------------------ATTTAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100431778 179 - 115148730 AGCAGAAACT-CCCCTCTTTATTCTAGATATTAGTAAAAGCTTGTGCAGAACCCTAAATTGCTCAGACTAAAGTACAGCTG-GGACCTTAGGATTCAATCCATTTGGTTTCCTTT----TTCTCTCCCAAACTGGCTCTGCAGA--ACAGTCTGCAAAACCACCACTGGGCTACAGATTAA-----------------------ATTTAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80579789 181 + 95678458 AGCAGACACT-CCCCCCTTTATTCTAGATATTAGTAAAATCTTATGCAGAACCATAAATTGCTCAGATTACAGTACAGCTG-AGACCTTAGGATTCAATCAATTTGGTTTCCTTT----TTCTCCCCCAAACTGGCTCTGCACAACACAGTCTGCAAAACCACCACTGGGTTACAGATTAA-----------------------ATTTAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81006607 181 - 96509753 AGCAGACACT-CCCCCCTTTATTCTAGATATTAGTAAAATCTTATGCAGAACCATAAATTGCTCAGATTACAGTACAGCTG-AGACCTTAGGATTCAATCAATTTGGTTTCTTTT----TTCTCCCCCAAACTGGCTCTGCACAACACAGTCTGCAAAACCACCACTGGGTTACAGATTAA-----------------------ATTTAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76263682 181 + 90941950 AGCAGACACT-CCCCCCTTTATTCTAGATATTAGTAAAATCTTATGCAGAACCATAAATTGCTCAGATTACAGTACAGCTG-AGACCTTAGGATTCAATCaatttggtttccttt----ttctccccaaaacTGGCTCTGCACAACACAGTCTGCAAAACCACCACTGGGTTACAGATTAA-----------------------ATTTAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18533502 181 + 33263144 AGCAGACACT-CCCCCCTTTATTCTAGATATTAGTAAAATCTTATGCAGAACCATAAATTGCTCAGATTACAGTACAGCTG-AGACCTTAGGATTCAATCAATTTGGTTTCCTTT----TTCTCCCCCAAACTGGCTCTGCACAACACAGTCTGCAAAACCACCACTGGGTTACAGATTAA-----------------------ATTTAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198236776 180 + 210400635 -GCAGAAACT-CCCCACTTTTTTCTAGATATTAATAAAATCTTACACAGAACCCTAAATTGCTCAGACTAAAGTATAGCTG-AGACCTTAGGATTCAATCCATTTGGTTTCCTTT----TTCTCCCTCAAACTGGCTCTGCAGAGCACAGTCTGCAAAACCACCACTGGGCTACAGATTAA-----------------------ATTTAT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40861072 200 - 69331447 AGCAGAAAATATCCCATTTGATTCTAGA------TAAAATTTCATGCAGAGCCCC-AATATATATGACACAGGAGTTGCTGCAGGCCTCAAGACCCAACCCA-TGGGTTTCCTTTCCACCCTTCCCCTAGA--GGCCCTGCAGAACACAGCTGGCAAAACCACTGCTGCACTGCAGATTCAAAGTAAATTCttttttaaaaactatttat i canFam3.chr10 I 218 I 186 e mm10.chr15 77100411 1731 + 104043685 I a score=212533.000000 s hg38.chr22_KI270876v1_alt 85783 62 + 263666 ATTCCATCTCATTCAGAGACCATGAGTCTAGATTAAATTTGGTAACTGATGTAA-------------------CAAATTAT s panTro4.chr22 34463197 62 + 49737984 ATTCCATCTCATTCAGAGACCATGAGTCTAGATTAAATTTGGTAACTGATGTAA-------------------CAAATTAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30879741 62 + 46535552 ATTCCATCTCATTCAGAGACCATGAGTCTAGATTAAATTTGGTAACTGATGTAA-------------------CAAATTAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100431957 62 - 115148730 ATTCCATCTCATTCAGAGACAATGAGTCTAGATTAAATTTGGTAACTGATGTAA-------------------CAAATTAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80579970 62 + 95678458 ATTCCATCTTATTCAGAGACCATGAGTCTAGATTAAATTTGGTAACTGATGTAA-------------------CAAATTAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81006788 62 - 96509753 ATTCCATCTTATTCAGAGACCATGAGTCTAGATTAAATTTGGTAACTGATGTAA-------------------CAAATTAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76263863 62 + 90941950 ATTCCATCTTATTCAGAGACCATGAGTCTAGATTAAATTTGGTAACTGAGGTAA-------------------CAAATTAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18533683 62 + 33263144 ATTCCATCTTATTCAGAGACCATGAGTCTAGATTAAATTTGGTAACTGATGTAA-------------------CAAATTAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198236956 61 + 210400635 ATTCCATTTTATTCGGAGACCACGAGTCTAGATTAAATTTGGCAA-TGATGTAA-------------------CAAATTAT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40861458 79 - 69331447 ATTCTATCTCATTTAGATA-AATGAGTCTAGATTAAA-CTGACAAGTGATGTAAAGGTTCTGCTTTTGTTAGGCACAATAT i canFam3.chr10 I 186 C 0 e mm10.chr15 77100411 1731 + 104043685 I a score=1201572.000000 s hg38.chr22_KI270876v1_alt 85845 364 + 263666 TCATAGAAAATTTCCTTCTCAATGAGAAAAACTTATAAACCTTACTATATAATATGTAATCATGAAACAGAAAATGATACACACACAACCATAC---CCATGGCTGTTATCTCTAGGGC-T---------AAGGAGAGCAACAGGTCCAGAATTATAAAAGTGATTAAAATATCCTCCTAATTTATTCCACTTATGCTCAGATGAATGAAAG--TCAGAACTAAAAGTAAGAGTCAGTGGGCATCCAGGGGTATTACGG--ACAAGTCTAACATATTAGAAAGAGCTACAGCAGCTGAAAAAGAAGGTGCTCAGGTGGGATCCAATTTGGGTTAATAGGCAACT-----AGATAGCATGTTTGCACTGTGTAAAAGATGAACATTA s panTro4.chr22 34463259 364 + 49737984 TCATAGAAAATTTCCTTCTCAATGAGAAAAACTTATAAACCTTACTATATAATATGTAATCATGAAACAGAAAATGATACACACACAACCATAC---CCATGGCTGTTATCTCTAGGGC-T---------AAGGAGAGCAACAGGTCCAGAATTATAAAAGTGATTAAAATATCCTCCTAATTTATTCCACTTATGCTCAGATGAATGAGAG--TCAGAAGTAAAAGTAAGAGTCAGTGGGCATCCAGGGGTATTATGG--ACAAGTCTAACATATTAGAAAGAGCTACAGCAGCTGAAAAAGAAGGCGCTCAGGTGGGATCCAATTTGGGTTAATAGGCAACT-----AGATAGCATATTTGCACTGTGTAAAAGATGAACTTTA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30879803 363 + 46535552 TCATAGAAAATTTTCTTCTCAATGAGAAAAACTTATAAACCTTACTATATAATATGTAATCATGAAATAGAAAATGATACACACACAACCATAT---CCATAGCTGTTATCTCTAGGGC-T---------AAGGAGAGCAACGGGTCCAGAATTATAAAAGTGATTAAAATATCCTCCTAATTTATTCCACTTATGCTCAGATGAATGCGAG--TCAGAAGTAAAAGTAAGAGTCAGTGGGCATCCAGGGGTATTACGA--ACAAGTCTAACATATTAGAAAGAGCTACAGCAGCTGAAAAAGAAGGTGCTCAGGTGGGATCCAATTTGGGTTAATAGGCAACT-----AG-TAGCATGTTTGCACTGTGTAAAAGATGAACTTTA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100432019 359 - 115148730 TCATAGAAAATTTCCTTCTCGATGAGAAAAACTTATAAACCTTACTGTATAATATATAATCATGAAATAGAAAATGATACACACACAACCATAC---CCATGGCTGTTACTTCTAGGGC-T---------AAGGAGAGCAACGGGTCCAGAATTATAAAAGTGATTAAAATATCCTCCTAACTTATTCCACTTATGCTCTGATGAATGAGAG--TCAGAAGTAAAAGTGAGAGTCAGTGCGCATCCAGGGGTATTACGG--ACAAGTCTAACAT-----GAAGAGCTACAGCAGCTGAAAAAGAAGGTGCTCAGGTGGGATCCAATTTGGGTTAATAGGCAACT-----AGATAGCATGTTTGCACTGTGTAAAAGATGAACTTTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80580032 341 + 95678458 TCATAGAAAATTTCCTTCTCAATGAGAAACACTTATAAACCTTACTATATAATATGTAATCATGAAATAGAAAATGGCACACACACAACCATAC---CCATGGCTGTTACCTCTAGGCC-T---------AAGGAGAGCAATGGGTCCAAAATCA-----------------------TAACTTATTCCACTTATGCTCAGATGAATGAGAG--TCAGAAGTAGAAGTGAGAGTCAGTGGGCATCCAGGGGTATTACGG--ACAAGTCTAACATATTACAAAGAGCTACAGCACCTGAAAAAGAAGGTGCTCAGGTGGGATCCAATTTGGGTTAGTAGGCAACT-----AGATAGCATGTTTGCACTGTGTAAAAGATGAACTTTA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81006850 341 - 96509753 TCATAGAAAATTTCCTTCTCAATGAGAAACACTTATAAACCTTACTATATAATATGTAATCATGAAATAGAAAATGGCACACACACAACCATAC---CCATGGCTGTTACCTCTAGGCC-T---------AAGGAGAGCAATGGGTCCAAAATCA-----------------------TAACTTATTCCACTTATGCTCAGATGAATGAGAG--TCAGAAGTAGAAGTGAGAGTCAGTGGGCATGCAGGGGTATTACGG--ACAAGTCTAACATATTACAAAGAGCTACAGCACCTGAAAAAGAAGGTGCTCAGGTGGGATCCAATTTGGGTTAGTAGGCAACT-----AGATAGCATATTTGCACTGTGTAAAAGATGAACTTTA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76263925 341 + 90941950 TCATAGAAAATTTCCTTCTCAATGAGAAACACTTATAAACCTTACTATATAATATGTAATCATGAAATAGAAAATGGCACACACACAACCATAC---CCATGGCTGTTACCTCTAGGCT-T---------AAGGAGAGCAATGGGTCCAAAATCA-----------------------TAACTTATTCCACTTATGCTCAGATGAATGAGAG--TCAGAAGTAGAAGTGAGAGTCAGTGGGCATCCAGGGGTATTACGG--ACAAGTCTAACATATTACAAAGAGCTACAGCACCTGAAAAAGAAGGTGCTCAGGTGGGATCCAATTTGGGTTAGTAGGCAACT-----AGATAGCATGTTTGCACTGTGTAAAACATGAACTTTA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18533745 341 + 33263144 TCATAGAAAATTTCCTTCTCAATGAGAAACACTTATAAACCTTACTATATAATATGTAATCATGAAATAGAAAATGGCACACACACAACCATAC---CCATGGCTGTTACCTCTAGGCC-T---------AAGGAGAGCAATGGGTCCAAAATCA-----------------------TAACTTATTCCACCTATGCTCAGATGAATGAGAG--TCAGAAGTAGAAGTGAGAGTCAGTGGGCATCCAGGGGTATTACGG--ACAAGTCTAACATATTACAAAGAGCTACAGCACCTGAAAAAGAAGGTGCTCAGGTGGGATCCAATTTGGGTTAGTAGGCAACT-----AGATAGCATGTTTGCACTGTGTAAAAGATGAACTTTA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198237017 359 + 210400635 TCATAGAAAA-TTCCTTCTCAATGAGAAACACTTACAAAGCTTACTTCATGATACATAATCATGAAATAGAAAATGATGCACACATAACCATAC---TCATGGCTGTTACCTCTAGGCC-T---------AAGGAGAGCAATGGGTCCAGAATTA-TAAAGGGATTAAAATACCCAC-TAACTTATTCCACTTATGCTCAGATGAATGAAAG--TCAGTAGTAAAAGTGAGAGTTGGTGGGCATCCCAGGGAATTATGG--ACAAGTCTAACGT--TATAAAGAACTATTGCAACTAAAAAAGAAGGTGCTCAGGTGGGATCCAATTTGGGTTAACAGGCAACT-----AGATAGCCTGTCTGCACTGTGTAAAAGATGAACTTTA i calJac3.chr1 C 0 C 0 s mm10.chr15 77102142 351 + 104043685 TCACTGAAAATTCCATTCTC----ACAAATGTTTATTACACTCACTATATAACTTGTCATCATGGAATGAAAA--GCTACACCCTAAAGC---C---CTATGGCCATCACTGACAGGTCTT---------AGGGAAAGCAAGGAATCTAGAATTATAAAAGAGACTAGGTTTCCTTG-TCACTAATCCAGATCACACTCGTGTGACAAGGAA--TCAGTAGGAA-----AGCACACCTGGGGCTCCAGGGCTACGTGGGCAGCAATTCC--CATGTTACAAGGAGCTACAGAGACCAAGGAGGAGGGTGCTTATGGGCTACCTAATCTGCTTTAGCAGGGAGCTTCTTCAAGTGGCATGT----ACTGTGCAGAAGATGAAAGTTA i mm10.chr15 I 1731 I 202 s canFam3.chr10 40861537 332 - 69331447 TCAC--AAGGTTTCTTTTTCAATGAGAAATATTTATGAAACCCACCATGTAACATGTAATCATGGAATAGAAGATAG-------AAAACCATGTGCATCATGGCTGTTAACTCTAGAGC-CTACCTTTAAAAGTAGAGCAAGGGGTCAAGAATTA------------------------------TTCCATTCATGCTCAGGAGCAGGGAGGGCTCAGTACTAAAAGTAAGCATTGGTGGGCAT------GTATTATGG--AGAAGCCTATCCTACCACAAAGAACTACAGCAGTTAAAAATGAGGGTGCCCCAGTGGGACCCCA-CTGGGTTGATAGGTAACC---TCAAATGACGTGTTTGCACTGTGTATGAG--GAACTTTA i canFam3.chr10 C 0 C 0 a score=6291.000000 s hg38.chr22_KI270876v1_alt 86209 3 + 263666 CTT-- s panTro4.chr22 34463623 3 + 49737984 CTT-- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30880166 3 + 46535552 CTT-- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100432378 3 - 115148730 CTT-- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80580373 3 + 95678458 CTT-- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81007191 3 - 96509753 CTT-- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76264266 3 + 90941950 CTT-- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18534086 3 + 33263144 CTT-- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198237376 3 + 210400635 CTT-- i calJac3.chr1 C 0 C 0 s canFam3.chr10 40861869 3 - 69331447 --TGG i canFam3.chr10 C 0 C 0 e mm10.chr15 77102493 202 + 104043685 I a score=1573896.000000 s hg38.chr22_KI270876v1_alt 86212 414 + 263666 AGAACATAACACCTTAATAACT-AAAAACTTAGCTCAATTGTAATGACAAA-GTTATTCTGTAAAAATAAAATACTCTCCCAGGTAAAGAGACTACTTCAACACAAATCAAACTGTCTTAAGACGGAAATAAAGACATTCTTAGAAGTTTAT-AAAAACTTCATATATTTACACAAGAATAA---ACACTCTTTCGAAGA----TTATAATTTCTTACCATTTGCATATGGTGTGACCATCTTCTTATTGGTCATTACACGTGCTGTAGCATTATTCACCTAAAAATAACAAGGAGAA-AAAAGGGCAGGGAAGAAGTGGACCACATTAGGGAACATAAAGTTGCACATCCAATAACAGAGTATTTAGTT---TAAAAT---GTAAATTTCTGAGAGCAGTGATTT--AAATAATTAACACAGCAATATAAAA s panTro4.chr22 34463626 411 + 49737984 AGAACGTAACATCTTAATAACT-AAAAACTTAGCTCAATTGTAATGACAAA-GTTATTTTGTAAATATAAAATACTGTCCCAGGTAAAGAGACTACTTCAACACAAATAAAACTGTCTTAAGACGGAAATAAAGACATTCTTAGAAGTTTAT-AAAAACTTCATATATTTACACAAGAATAA---ACACTCTTTCGAAGA----TTATAATTTCTTACCATTTGCATATGGTGTGACCATCTTCTTATTGGTCATTACACGTGCTGTAGCATTATTCACCTAAAAATAACAAGGAGAA-AAAAGGGCAGGGAAGAAGTGGACCACATTAGGGAACACAAAGTTGCACATCCAATAACAGAGTATTTAGTT---TAAAAT---GTAAATTTCT--GAGCATTGATTT--AAATAATTAACACAGC-atataaaa i panTro4.chr22 C 0 I 173 s ponAbe2.chr22 30880169 420 + 46535552 AGAACATAACACCTTAATAACT-AAAAACTTAGCTCAATTGTAATGACAAA-ATTATTTTGTAAACACAAAATACTCTCCCAGGTAAAGAGACTACTTCAACACAAATTAAACTGTCTTAAGACGGAAATAAAGACATTCTTAGAAGTTTAT-AAAAACTTCATATATTTACACAAGAATAA---ACACTCTTTCGAAGATGATTTATAATTTCTTACCATTTGCATATGGTGTGACCATCTTCTTATTGGTCATTACACGTGCTGTAGCATTATTCACCTAAAAATAACAAGGAGAA-AAAAGGGCAGGGAAGAAGTGGACCACATTAGGGAACATAAAGTTGCACATCCAATAACAGAGTATTTAGTT---TAAAAT---GTAAATTTCTGAGAGCATTGatttaaaaataattaacatagcaatataaaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100432381 410 - 115148730 AGAACATAACACCTTACTAACT-AAAAACTTAGCTCAATTGTAATGACAAA-GTTATATTGTAAACATAAAATACTCTCCCAGGTAAAGAGACTACTTCA--------CAAACTGTCTTAAGACAGAAATAG----ATTCTTAGAAGTTTATAAAAAACTTCGTATATTTACACAAGAATAA---ACACTCTTTCGAAGATGATTTATAATTTCTTACCATTTGCATACGGTGTGACCATCTTCTTATTGGTCATTACACGTGCTGTAGCATTATTCACCTAAAAATAACAAGGAGAA-AAAGGGGCAGGGAAGAAGTGGACCACATTAGGGAACATAAAGTTGCACATCCAATAACAGAGTACTTACTT---TAAAATTAAGTAAATTTCTGAGAACATTGATTT--AAATAATTAACACAGCAATATAAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80580376 416 + 95678458 AGAACATAACACCTTAATACCTAAAAAACATAGCTCAATTGTAATGACAAA-GTTATGTTGTAAACATAAAATACTCTCCCAGGTAAAGAGACT-CTTCAATGCAAATTAAACTGTCTTAAGACTGAAATAAAG--ATTCTTAGAAGTTTAT-AAAAACTTAATATATTTACAGAAGAATAA---ACACTCTTTCGAAGATGATTTATAATTTCTTACCATTTGCATATGGTGTGACCATCTTCTTATTGGTCATTACACGTGCTGTAGCATTATTCACCTAAAAATAACAAGGAGAA-AAAAGGGCAGGGAAGAAGTGGACCACATTAGGGAACATAAAGTTGCACATCCAGTAACATAGTACTTAGTT---TAAAAT---GCAAATTTCTGGGAGCATTGATTT--AAATAATTAACACAGCaatataaaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81007194 416 - 96509753 AGAACATAACACCTTAATACCTAAAAAACATAGCTCAATTGTAATGACAAA-GTTATGTTGTAAACATAAAATACTCTCCCAGGTAAAGAGACT-CTTCAATGCAAATTAAACTGTCTTAAGACTGAAATAAGG--ATTCTTAGAAGTTTAT-AAAAACTTAATATATTTACAGAAGAATAA---ACACTCTTTCGAAGATGATTTATAATTTCTTACCATTTGCATATGGTGTGACCATCTTCTTATTGGTCATTACACGTGCTGTAGCATTATTCACCTAAAAATAACAAGGAGAA-AAAAGGGCAGGGAAGAAGTGGACCACATTAGGGAACATAAAGTTGCACATCCAGTAACATAGTACTTAGTT---TAAAAT---GCAAATTTCTGGGAGCATTGATTT--AAATAATTAACACAGCAATATAAAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76264269 416 + 90941950 AGAACATAACACCTTAATACCTAAAAAACATAGCTCAATTGTAATGACAAA-GTGATGTTGTAAACATAAAATACTCCCCCAGGTAAAGAGACT-CTTCAATGCAAATTAAACTGTCTTAAGACTGAAATAAAG--ATTCTTAGAAGTTTAT-AAAAACTTAATATATTTACAGAAGAATAA---ACACTCTTTCGAAGatgatttataatttcttaccATTTGCATATGGTGTGACCATCTTCTTATTGGTCATTACACGTGCTGTAGCATTATTCACCTAAAaataacaaggagaa-aaaagggCAGGGAAGAAGTGGACCACATTAGGGAACATAAAGTTGCACATCCAGTAACATAGTACTtagtt---taaaat---gcaaatttctgaGAGCATTGACTT--AAATAATTAACAcagcaatataaaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18534089 416 + 33263144 AGAACATAACACCTTAATACCTAAAAAACATAGCTCAATTGTAATGACAAG-GTTATGTTGTAAACATAAAATACTCTCCCAGGTAAAGAGACT-CTTCAATGCAAATTAAACTGTCTTAAGACTGAAATAAAG--ATTCTTAGAAGTTTAT-AAAAACTTAATATATTTACATAAGAATAA---ACACTCTTTCGAAGATGATTTATAATTTCTTACCATTTGCATATGGTGTGACCATCTTCTTATTGGTCATTACACGTGCTGTAGCATTATTCACCTAAAAATAACAAGGAGAA-AAAAGGGCAGGGAAGAAGTGGACCACATTAGGGAACATAAAGTTGCACATCCAGTAACATAGTACTTAGTT---TAAAAT---GTAAATTTCTGAGAGCATTGATTT--AAATAATGAACACAGCAATATAAAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198237379 419 + 210400635 AGAACATAACACCTTAATAACTAAAGAACTTAGTTCAATTATAATGACAAT-GTAAT-TTGTAAACATAAAATAGTCTCCTAGGTAAAGAGACTACTTCAACACAAATTAAACTGTCTTAAGACTGAAATAAAGGGATTCTTAGAAGTTTATTAAAAACTTCATATATTTACACAAGAATAA---ACACTATTTTGAAGATGATTTATAATTTCTTACCATTTGCATATGGCGTGACCATCTTCTTATTGGTCATTACACGTGCTGTAGCATTATTTACCTAAAAATAACAAGGAGAA-AAAAGGGCAGGGAGGAAGTAGACCACATTAGGGGATATAAAGTTGCACATCCCGCAACACAGTACTTAGTT---TAAAAT---GTAAATTTCTGAGAGCATTGATTT--AAATAATTAACAAAGCaatataaaa i calJac3.chr1 C 0 I 13 s mm10.chr15 77102695 378 + 104043685 AGAACAAAACACCTTTGTAAGTTAAAAACTTAGCTTAATTCTAAGGAAAAATATTAATCTGTAAAGAGAAAACACTCTTCT-----AAGAG----GTCAAACGTGAATT----------------GCAATGAAG---GTCCTACAAAGTCAT-GAAAATCTCATCTATCTACACAACAACAA---AGGTTCCCCCAGGCG---CTGGTAACTCCTCACCATTTGCATATGGCGTGACCATCTTCTTGTTGGTCATGACCCGTGCTGTTGCATTATTCACCTAAAGATAACGAGCAGAC-AAGAGGGGTGGGGAGAGA-----CACATTAGGGGACATAACACTGCTCACTCAGTAACAGAGCA--TAATT---TAAAAA---GTACATTTCTGATAGC----ATTT--ATATAATTAACACAGCATCATAAAA i mm10.chr15 I 202 C 0 s canFam3.chr10 40861872 419 - 69331447 AGACCATAACAGCTGAATTACTGAAAAACTTAGCTTAATTCTAAGAAAAAA-GTTAA-CGGTA-----AAAATACTCTCCTA-GTAAAGAAAATACTTCAATCTAAATTAAACTGCCATAAGACTGAAATCAAGAGATTCTTTGATGATTAC-CAAAAGTCCACATATTAATACAAAAGTAAGTGACATCTTTCTGAAGATGATTTGTAACCTCTTACCATTTGCATATGGTGTGACCATCTTCTTATTGGTCATTACACGTGCTGTAGCATTATTCACCTAAAAATACAAAGAAAAAGGAAGGGGTAGGGAGAAAGTAGACCACATTAGGGAACCTGGAGTTGCTCATCTGATAACACAGCACTCAGTTTAATAAAAT---GTAAATTTCAGAGAACATTGattt--aaataattaatatagcaatataaaa i canFam3.chr10 C 0 C 0 a score=2055701.000000 s hg38.chr22_KI270876v1_alt 86626 579 + 263666 TATTAATATATAGTATTTTAATTAAAGTTCTTATCAAATGAGGATAACAAGAGTAAAGTG-AGTTTCTTGGTTTCCAAATA-----------------------TCAGTACTCC---AAAGAAA--ATACATTTGCAAGATC-TTTGGACATCTTTT-TAACAGAGAAATCTCTGCACTAAGGAAAACACAGAAAAAAGTAAATAGGA---AACTATAT-TAGCAATTCACTTTG--AAGTCTGTTAATAAAACAGAGGCTTGCCACATGGGTTATGAAATAGATTGATGGAAAGGTGATAAAATAAATCT---GATTTCA---CCTGTCCTAATGTTCAGCATTTT-AAATATGTCTGTCAGAGATTTTTACTGTCTG-----------------AGGTAAGT-----AAACAAATATAGAAACCTAAGA-----------------------TTCCCCTGCTGACAGCCTTCAGGACCATTCTGA-----------ATTTTCTAGACTACATGGTCTATCAATTTAAGAACAAAGCTTTTAAGAAAGCCTTTAAAGTAGGCACTTAAAAGAATTG-AGAAAATAAAGTGTTTATTTATTTTGTTTTATGGTACTCTCCACCCTCATTACAGAACTGCATATTTTAAAGCATTCTCAGTGCTAGAGTAAGTAGGTGTTA s panTro4.chr22 34464210 573 + 49737984 tattaatatatagtattttaattaaaGTTCTTATCAAATGAG-ATAACAAGAGTAAAGTG-AGTTTCTTGGTTTCCAAATA-----------------------TCAGTACTCC---AAAGAAA--ATACATTTGCAAGATC-TTTGGACATCTTTT-TAACAGAGAAATCTCTGCACTAAGGAAAACACAGAAAAAAGTAAATAGGA---AACTATAT-TAGCAATTCACTTTG--AAGTTTGTTAATAAAACAGAGGCTTGCCACATGAGTTAAGAAATAGATTGATGGAAAGGTGATAAA-----TCT---GATTTCA---CCTGTCCTAATGTTCAGCATTTT-AAATATGTCTGTCAGAGATTTTTACTGTCTG-----------------AGGTAAGT-----AAACAAATACAGAAACCTAAGA-----------------------TTCCCATGTTGACAGCCTTCAGGACCATTCTGA-----------ATTTTCTAGACTACATGGTCTATCAATTTAAGAACAAAGCTTTTAAGAAAGCCTTTAAAGTAGGCACTTAAAAGAATTG-AGAAAATAAACTGTTTATTTATTTTGTTTTATGGTACTCTCCACCCTCATTACAGAACTGCATATTTTAAAGCATTCTCAGTGCTAGAGTAAGTAGGTGTTA i panTro4.chr22 I 173 C 0 s ponAbe2.chr22 30880589 582 + 46535552 tattaatatatagtattttaattaaaGTTCTTATCAAATGAGGATAACAAGAGTAAAGTG-AGTTTCTTGGTTTCCAAACA-----------------------TCAGTACTCC---AAAGAAA--ATACATTTGCAAGATC-TTCGGACGTCTTTT-AAACAGAGAAATCTCTGGACTAAGGAAAACACAGAAAAAAGTAAATAGGAAACAACTATAT-TAGCAATTCACTTTG--AAGTTTGTTAATAAAACAGAGGCTTGCCACATGGGTTATGAAATAGATTGATGGAAAGGTGATAAAATAAATCT---GATTTCA---CCTGTCCTAATGTTCAGCATTTT-AAATATGTCTGTCCGAGATTTTTACTGTCTG-----------------AGGTAAGT-----AAACAAATATAGAAACCTAAGA-----------------------TTCCCATGGTGACAGCCTTCAGGACCATTCTGA-----------ATTTTCTAGACTACATGGTCTATCAATTTAAGAACAAAGCTTTTAAGAAAGCCTTTAAAGTAGGCACTTAAAAGAATTG-AGAAAATAAAGTCTTTATTTATTTTGTTTTATGGTACTCTCCACCCTCATTACAGAACTGCATATTTTAAAGCATTCTCAGTGCTAGAGTAAGTAGGTGTTA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100432791 582 - 115148730 TATTAATATATAGTATTTTAATTAAAGTTCTTATCAAATGAGGATAACAAGAGTAAAATG-AGTTTCTTGGTTTCCAAATA-----------------------TCAGTACTCC---AAAGAAA--ATACATTTGCAAGATC-TTTGGACATCTTTT-AAACAGAGAAATCTCTGCACTACGGAAAACCCAGAAAAAAGTAAATAGGAAACAACTATAT-TAGCAATTCACTTTG--AAGTTTGTTAATAAGACAGAGGCTTGCCACATGGGTTATGAAATAGATTGATGGAAAGGTGATAAAATAAATCT---GATTTCA---CCTGTCCTAATGTTCAGCATTTT-AAATTTGTCTGTCCAAGATTTTTACTGTCTG-----------------AGGTAAGT-----AAACAAATATAGAAACCTAAGA-----------------------TTCCCATGTTGACAGCCTTCAGGACCATTCTGA-----------ATTTTCTAGACTACATGGTCTATCAATTTAAGAACAAAGCTTTTAAGAAAGCCTTTAAAGTAGGCACTTAAAAGAACTG-AGAAAATAAAGTGTTTATTTATTTTGTTTTATGGTACTCTCCACCCTCATTACAGAACTGCATATTTTAATGCATTCTCAGTGCTAGCGTAAGTAGGTGTTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80580792 582 + 95678458 tattaatatataGTGTTTTAATTAAAGTTCTTATTAAATGAGGATAACAAGAGTAAAATG-AGTTTCTTGGTTTCCAAATA-----------------------TCAGTACTCC---AAAGACA--ATACATTTGCAAAATC-TTTGGACATCTTTT-AAACAGAGAAATCTCTGCACTAAGGAAAACATAGAAAAAAGTAAATAGGAAACAACTATAT-TAGCAATTCACTTTG--AAGTTTGTTAATAAAACAGAGGCTTGCCACATGGGTTATGAAACAGATTGATGGAAAGGTGATAAAATAAATCT---GATTTCA---CCTGTCCTAATGTTCAGCATTTT-AAATACGTCTGTCCGAGATTTTTACTGTCTG-----------------ACGTCAGT-----AAACAAATATAGAAACCTAAGA-----------------------TTCCCATGTTGACAGCCTTCAGGACCATTCTGA-----------ATTTTCTAGACTATATGGTCTATCAACTCAGGAACAAAACTTTTAAAAAAGCCCTTAAAGTAGGCACTTAAAAGAATTG-AGAAAATCAAGTGTTTATTTATTTTGTTTTATGGCACTCTCCACCCTCATTACAGAACTGCGTATTTTAAAGCATTCTCAGTACGAGAGTAAGCAGGCGCTA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81007610 582 - 96509753 TATTAATATATAGTGTTTTAATTAAAGTTTTTATTAAATCAGGATAACAAGAGTAAAATG-AGTTTCTTGGTTTCCAAATA-----------------------TCAGTACTCC---AAAGACA--ATACATTTGCAAAATC-TTTGGACATCTTTT-AAACAGAGAAATCTCTGCACTAAGGAAAACATAGAAAAAAGTAAATAGGAAACAACTATAT-TAGCAATTCACTTTG--AAGTTTGTTAATAAAACAGAGGCTTGCCACATGGGTTATGAAACAGATTGATGGAAAGGTGATAAAATAAATCT---GATTTCA---CCTGTCCTAATGTTCCGCATTTT-AAATACGTCTGTCCGAGATTTTTACTGTCTG-----------------ACGTCAGT-----AAACAAATATAGAAACCTAAGA-----------------------TTCCCATGTTGACAGCCTTCAGGACCATTCTGA-----------ATTTTCTAGACTATATGGTCTATCAACTCAGGAACAAAACTTTTAAAAAAGCCCTTAAAGTAGGCACTTAAAAGAATTG-AGAAAATCAAGTGTTTATTTATTTTGTTTTATGGCACTCTCCACCCTCATTACAGAACTGCGTATTTTAAAGCATTCTCAGTACGAGAGTAAGCAGGCGCTA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76264685 582 + 90941950 tattaatatatagtgTTTTAATTAAAGTTCTTATTAAATGAGGATAACAAGAGTAAAATG-AGTttcttggtttccaaata-----------------------tcagtaCTCC---AAAGACA--ATACATTTGCAAAATC-TTTGGACATCTTTT-AAACAGAGAAATCTCTGCACTaaggaaaacatggaaaaaagTAAATAGGAAACAACTATAT-TAGCAATTCACTTTG--AAGTTTGTTAATAAAACAGAGGCTTGCCACATGGGTTATGAAACAGATTGATGGAACGGTGataaaataaatct---gatttcA---CCTGTCCTAatgttcagcatttt-aaatacGTCTGTCCGAGATTTTTACTGTCTG-----------------ACGTcaat-----aaacaaatacagaaacCTAAGA-----------------------TTCCCATGTTGACAGCCTTCAGGACCATTCTGA-----------ATTTTCTAGACTACATGGTCTATCAACTCAggaacaaaacttttaaaaaagcctTTAAAGTAGGCACTTAAAAGAATTG-AGAAAATCAAgcgtttatttattttgttttatggcaCTCTCCACCCTCATTACAGAACTGCGTATTTTAAAGCATTCTCAGTACAAGAATAAGCAGGTGCTA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18534505 583 + 33263144 TATTAATATATAGTGTTTTAATTAAAGTTCTTATTAAATGAGGATAACAAGAGTAAAATG-AGTTTCTTGGTTTCCAAATA-----------------------TCAGTACTCC---AAAGACA--ATACATTTGCAAAATC-TTTGGACATCTTTT-AAACAGAGAAATCTCTGCACTAAGGAAAACACAGAAAAAAGTAAATAGGAAACAACTATAT-TAGCAATTCACTTTG--AAGTTTGTTAATAAAACAGAGGCTTGCCACATGGGTTATGAAACAGATTGATGGAAAGGTGATAAAATAAATCT---GATTTCA---CCTGTCCTAATGTTCAGCATTTTAAAATACATCTGTCCGAGATTTTTACTGTCTG-----------------ACGTCAGT-----AAACAAATATAGAAACCTAAGA-----------------------TTCCCATGTTGACAGCCTTCAGGACCATTCTGA-----------ATTTTCTAGACCACATGGTCTATCAACTCAGGAACAAAACTTTTAAAAAAGCCTTTAAAGTAGGTACTTAAAAGAACTG-AGGAAATCAAGTGTTTGTTTATTTTGTTTTATGGCACTCTCCACCCTCATTACAGAACTGCGTATTTTAAAGCATTCTCAGTACGAGAGTAAGCAGGCGCTA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198237811 575 + 210400635 tattaatatatagtattttaattaaaGTGCTTATTAAATGAGGCAAACAAGAGTAAAATG-AGTTTCTTGGTTTCCAAATA-----------------------TCAGTACTCCAAAAAAAAAA--ATACATTTGCAAGATC-TTTGGACACCTTTT-AAACAGAGAAACCTCTGTACTGAGGAAAATATGGAAAAAAGTAAACAGAA---AACGGTAT-TAGCAATTCACTTTG--AAGTTTGTTAATTAAA-ACAGGCTTGCCACATGGGTCATTAAATAAATTGATGGAAAGGTGATAACATAAATCT---GATTTCA---CCTGTCCTACTGTTCAGCATTTT-TAAT--GTTTGTCTGGGATTTTTACTGTCTG-----------------AGCTTAGT-----AAACAAATATAGAAACCCAAGA-----------------------TTCCCATGCTGATAGCCTTCAGGATCATTCTAA-----------ATTTTCTAGACTACATGGTCTATCAATTTAAGAACAAAGCTTTTAAGAAAGCCTTTAAAGTAGGCACTTCAAAGAATTG-AGAAAACAAAGTG----TTTATTTTGTTTTACGGTACTCTCTACCCTCATGACCAAACTGCATATTTGAAAGCGTCCTCAGTGCCAGAGTAAGCAGGTGTTA i calJac3.chr1 I 13 C 0 s mm10.chr15 77103073 573 + 104043685 TTTTCATAAA-----TTTTAAT----GTGTTTATTAAATGAGGCTAACAAGAGTAAAATGTAGTTTCTT-GTCTCCAAATAGAAAACTGAGGCTGTTCCACCATTCAGCACTGT---AGAGAAACCGTGCAGTTA-AAGTTC-TCTGGACAGCCTT-------AAGATTTCACTTTACTGAGGGCAATTTGGAAAAAAGGAAATCAGGAACAAATATGTCTACAAAAGAACTTTG--AAGCTTGTTAATAAAACGGAGGCTTGCCACCTGAGCCATGATG-----------------------------CT---GATGTCATATCCTGTCCTGATAGTTTACCCCCC-CCCCCCTTTT--------TTTAAACTGTTTG-----------------GGATTAGTAAAaaaaataaaaataaaaataaaaaAAATAGAGGAG-------------TCCCCATGGTGGCAGACTGTAGGATCATTCTGAAAATCATTCTGATTTTCTAGATCACAGGGGACACTCACTTAAG-ATGAAGTTTCT--GAGGGCCTTTGGCACAGGGGCTCAGCA-----G-TGAAGAGTGACTGCTTAGTTCTCCTGCCCTGTGGTCCCCTAACCCATAATGAGGCATGTGTGTAC---GAGGCTTTCTCCATGCTAAGGTGAGGAGAAATTG i mm10.chr15 C 0 I 204 s canFam3.chr10 40862291 639 - 69331447 tattgatatatagtattttaattaaaGTGTTTATAAAATGAGGCTAACGAGAGTAAAATGCAGTTTCTTGGTCTCCAAATGGAAAACTCGGGCTATTTTAGCAATAAGTACTCC---AAAGGAAAGATATATTCGTAAGTTCTTTTGGAGATCTCTTAAAACAGAGAAGTCTC-GAATTATGGAAAACACAGAAGAAA-TAAATTTGAAACAGCTCTGT-TTGCAAATGAACTTAATAAGTTCATTAATAAAA--GAGGCTTGCCACATGGGTTAGGAAATAGATTTATAGGAAGGTAAGAAAATAAATCTATGGATTTCA---CCTGTACTAATGTTCAGAATTGT-TGAT--GACTGTAAGA---TTTTACTGTTTGTaaaacaaaacaaaacaaaacaaaa-----aaacaaaaagcaaaacCCAAAAAACCCAAAAGACCAGAGCTTAGAATCCCATGTTGACCATACTGAGGACCATTCTGA-----------ATTTTCTAGACTATGTGGTCTATCCATTTAAGAATAGG--TTTTCAGAAGGTCTTTAAATGAGGCATT------AACTGAAAAAAATGAAGCTTTAGTTTCTTTTGTTTTATGGTTCTCTCCACCCTCATTACAGAAGTGCAGAATTTAGAGCATTCTCAGTGCTAGGGTAAGTAGATGTTA i canFam3.chr10 C 0 C 0 a score=667767.000000 s hg38.chr22_KI270876v1_alt 87205 190 + 263666 CAAAGATGCTGCTGCTGAAGAAAAGATGAATGGAACTAAGATGTCAGCATACTGCAGCCCAGTGACAGAACCAGTCTCAAAGCTCTTGCAAGGAGGGTAAAGCTCCACC----ATAGAACTTGACT-TATACTGTGTTGTCAGGTCATAAAACATGCCAATTGAAAAAA-----GAAGCATA--AAATATAAATGTCTTATT s panTro4.chr22 34464783 190 + 49737984 CAAAGATGGTGCTGCTGAAGAAAAGATGAATGGAACTAAGACGCCAGCATACTGCAGCCCAGTGACAGAACCAGTCTCAAAGCTCTCGCAAGGAGGGTAAAGCTCCACC----ATAGAACTTGACT-TATACTGTGTTGTCAGGTCATAAAACATGCCAATTGAAAAAA-----GAAGCATA--AAATATAAATGTCTTATT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30881171 190 + 46535552 CAAAGACGGTGCTGCTGAAGAAAAGATGAATGGAACTAAGATGCCAGCATACTGCAGCCCAGTGACAGAACCAGTCTCAAAGCTCTTGCACGGAGGGTAAAGCCCCACC----ATAGAACTTGACT-TATACTGTGTTGTCAGGTCATAAAACATGCCAATTGAAAAAA-----GAAGCATA--AAATATAAATGTCTTATT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100433373 188 - 115148730 CAAAGACAGTGCTGCTGAAGAAAAGATGAATGGAACTAAGATGCCAGCATACTGCAGCCCAGTGACAGAACCAGTCTCAAAGCTCTTGCAAGGAGGGTAAAGCCCCACC----ATAGAACTTGACT-TATACTGTGTTGTCAGGTCATAAAACATGCCAATTG--AAAA-----GAAGCATA--AAATATAAATGTCTTATT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80581374 190 + 95678458 CAAAGACGGTGCTGCTGAAGAAAAGATGAATGGAACTGAGATGCCAGCATACTGCAGCCCAGTGACAGAACCAGCCTCAAAGCTCTTGCAAGGAGGGTAAAGTCCCACC----ATAGAACTTGACT-TACACTGTGTTGTCAGGTCATAAAACATGCCAATTGAAAAAA-----GCAGCATA--AAGTAGAAATGTCTTATT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81008192 190 - 96509753 CAAAGACGGTGCTGCTGAAGAAAAGATGAATGGAACTGAGATGCCAGCATACTGCAGCCCAGTGACAGAACCAGCCTCAAAGCTCTTGCAAGGAGGGTAAAGTCCCACC----ATAGAACTTGACT-TACACTGTGTTGTCAGGTCATAAAACATGTCAATTGAAAAAA-----GCAGCATA--AAGTAGAAATGTCTTATT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76265267 190 + 90941950 CAAAGACGGTGCTGCTGAAGAAAAGATGAACGGAACTGAGATGCCAGCATACTGCAGCCCAGTGACAGAACCAGCCTCAAAGCTCTTGCAAGGAGGGTAAAGTCCCACC----ATAGAACTTGACT-TACACTGTGTTGTCAGGTCATAAAACATGCCAATTGAAAAAA-----GAAgcata--aaatagaaatgtcttaTT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18535088 190 + 33263144 CAAAGACGGTGCTGCTGAAGGAAAGATGAATGGAACTGAGATGCCAGCATACTGCAGCCCAGTGACAGAACCAGCCTCAAAGCTCTTGCAAGGAGGGTGAAGTCCCACC----ATAGAACTTGACT-TACACTGTGTTGTCAGGTCATAAAACATGCCAATTGAAAAAA-----CAAGCATA--AAATAGAAATGTCTTATT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198238386 194 + 210400635 CAAAGACGGTACTGCTGAAGAAAAGATGAATGGAACTCAGATGCCAGCATCCTGCAGCCCAGTGACAGAACCAGTCTCAAAGCTTTTGCAAGGAGGGTAAAGCCCCACCATAGATAGAACTTGACT-TATACGGTGTTGTCAGGTCATACAACATGCCAATTGAAAAAA-----GAATCATA--AAATATAAATGACTTATT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40862930 192 - 69331447 CAAGGATGGCGCTGATGACAAAAAGATGAATGGAGCCTCAAAGCCAGAAGACTGCAGCCCAGTGTCAGAACCAGCCT-AAAGCTCTTGCAAGGAGGGTGCAGTATCACC----ATAGAACCTGGCTGTACACCGTTTTGTCAGGTCGGAGAACAGACCAGTTTTTTAAATTACCAAAACATATCAAATATAAATGTC----- i canFam3.chr10 C 0 C 0 e mm10.chr15 77103646 204 + 104043685 I a score=12322318.000000 s hg38.chr22_KI270876v1_alt 87395 3097 + 263666 TTTGCCTCTTCAAATTTACATT-GTGTTCAATTTGTATGGTAATAAATTTTTGTTATGAAAAGACCAATTTTAGGTAGAATTAGAACTAAAAAAAAAACCTCTTCCTATGTCTTTTAAGATTTGTACAGTGATAA-TCCCC---CATATGAGGAAAGAGCTTGAAACTCCATTTACTCTAGCTTCGCCCACCAAATAATAT-AAACGTTTCACATTTAAAAAGAAAGAATGGGATACAACAATGATGAGACTGAGAGCATGCAGTTAAAAAACACACACACACAAATAAAAGAAAGAAAAAACAATCAATTTTGGAAAGAGGGGAGAAACTGAAAAGCAAGGTTCTCACAGACAAGGATTAGAATGGAGCAAGAGCTGAAACCAGCTGCTGGAGCAGAAAGCAACCAAGCACTTAAAAGGAAAAATGGCCAGAACCAATCAGAAACCACCAGTCAGC--AAAAGAGACCAACAGCTGCGTGTAACT-----GAAGGGATGGGAAAGGAAGAATAGGGAAAGGGACAGGAACAAGGATCCGGAAAAAGAGAGTAA----GGTAGGGAAAAAGAAAAGAGAAA-----GTCA--------GGAAGGGTGTAACGGGCAAAGAAAGAACAGTCAGAGCTACA--AACGGGGGTTTGGGAAACAGGAAAAGTAGGGAAGGATGTAGGGGCAGGAAGTGCATTAATAAAACCAGCCAAAC-TGGAGTTCAGTAACTCTGAGTAAGATGTGCAAGGGG-AAAAAAATCACCATGAAGTCAGTAATCAAACAGCTCAGACCGCTACAAAACAATATGTACATCCAAAATCCAGGCGGCATTACTCAACAGCATTgaaaataaaagggggaaaggaaaaggaagaggaaCAACAAGTCAAATCACATTTTGTAGTGTTAATGTGAGATGGCAGATGGACTTTTTCTTTCTTATTTAATTGTTTTGTAATT-ACATTTTTAAAAGCTTCTTCTCTAGTGCTTTTG-TTCACTTACCGCCAACGGGCACCATCGCCAGCATTGTGTATAGTTACCATGGAAAGAGTGAGTCAAGTGAAGGGCCCTAAATGCTAAACCATTGGAAAGGAGGGGAAAAAAAGCAAAATATGCAGACATCTTACTCAAAATGGTGGCTTTTACATTTAATACTTTAAAAAATTGGGAAAGGGGAAAGGAGCCAGTTAACCTTCGATGTGTTA-TCAAAAAGGGCTGGTGAATACCAGGCGGTAGACTTGGTCATAATCACA---GTACAT-----TCGCCAGCCAGCCATCATACCCTCTGTTTAAGAATTTTA-TCCATAA-----AAATTTAGATACCAAAATTCTTGGTATTAGATATATTTAAAAACTACACGAGTTTTGGA-TTA-TTTCCTCCCTCCCCACAATCTCTAGAATCTTCTA----TTTCGTGCTTATCATGTGCACAAAGAGGCGAACTGGCCTCCCAAGAGAGAGG--ATATTGGCTGGCCCCTTGATTCATTATAGAACACAGTGTTATAAACTGGATAGTTTTT-------AGACAATT-T-AACATTAGTTTTGCTTAGGCCTGATCACAGGAATTCA----GAGTATTGCAAACTGAAGCAAAGGAAAAAAATCAAGAGAGCAGAAAGATCAACATTTTGAAGGaaaaacataaatgaa--aaacaaacacacacacacgcacacacaca-cagtcaaaattaaaaCCCCCAAACAACCAATAAATGAGGAGGGAGGCAGATAGAAGTGTTACTTTTATACATTTTAGTGCAAGAAGGTGAAGA-----------------------AGACAGAGATACAAACACA------------CATA-----CAT------GTGCACACGCACACATAAGACAGGGTTCCAAATGTGAACTAAGTGAGGCAACACGAAAaaagagaaataaaaatat-aaaccagaaattgaattaTTAAAGACATGCACCTCGATTTTACGGCCCTCTACCACGGTGCCGTGTAATTTCTCCCTGGCCCTGTCTGCATCAGCACTATTCTCGAAAGTTACGAACCCGAATCCCTGCATGCAGCGGGAGAAGGGGGGAAAACATGCACATCGTTATATTGAAATACTGATCTCTTGGTAAATAGAG-AAAAAATATCATAGTATGAAACTGACATCAGCAACAACT-----CAGCAATAATCTCCCAAAGTCACATTTTTGGTCCATGCATATTT-GTAAAGGGAAA-TTAAATCCaataaaagaataaagaactg---------------------------------t------aataataataataat-----------taacagcaatg-------------------taacaataataaaataaaacataaAGCATATGAGGCCAGACCAAAATTAAGGTACAGAGTTACTCGGGTCAAACTATTCAACCAAAAATCTGAAGAT-------------------------------------------------------------------------------------------TTTTTA-ATGCCCT-----------------ACCTTTCTCTCTCAA------------------------------TTCATGTTATTAATTTAATATACATGCCC----------CTTTATGTAATACTAAAAAAG-ACTTAAT---------------------------------TAAATTGACTCTCTGACATCCCAAATCTATTATTTTCCAGTAACTGCTACATGAAATCTGACATTCAGGTTCAA-CATTGCATAATGAGATTTTTTTT-AAAGTAGGTCTAATCATTTTAGCCCCACGTTGCCTG-TTGCTTTTATCACTATT-AATTCCTTTGGGAACAGGATAACTTAGGGCATAG--TCGGTGTACAATTTTCTATGTACTGGGTGTGGGAGAGGAGAGCATTCATGCTCTTCTAAGCAAATAAAAATATCACTAAGCAGTGGTCAATTATAACTTTTCTTCAATGCCCTTTTTAAATGACCAGATTGACAC-TTAGAGTAAAAATATGTTCAACTGAATTTCAGAAAACTGCTAACCCAAATTTGCCTAAATTATTCATTTATTGATGTTT-ATACCTGCTATTAAAGGTAG--TAGTAACTTTCTATATATA--GAGAAAAA-AGGAACAGTC-----AACAGGCAATGGGAATGAGATCTACATTAGTGACATCAGTTGTACAC----------TATTCAGTA-GAAAAAGGATATCAGAAAACAGCAATGCAGCTGGTATAA--TGACTTAGGATTA-ATTTGTTTGTTCCTTGCAAGATACTATAA--AAATGGAGTGGAGCTTTAACTCATTAAGTAGACAAATCAGGAGACCAGGGAGTTGACTACCTTC------ACTCCGATGT-------------TCACGT--------------------------------ACTAC------------CAATTTTAACACCAGGAGCATTTACTATATA--------CTTATATGAC--TTTCCTAAAACATCATATTCACT s panTro4.chr22 34464973 3100 + 49737984 TTTGCCTCTTCAAATTTACATT-GTGTTCAATTTGTATGGTAATAAATTTTTGTTATGAAAAGACCAATTTTAGGTAGAATTAGAACTTAAAAAAA--CCTCTTCCTATGTCTTTTAAGATTTGTACAGTGATAA-TCCCC---CATATGAGGAAAGAGCTTGAAACTCCATTTACTCTAGCTTTGCCCACCAAATAATAT-AAACGTTTCACATTTAAAAAGAAAGAATGGGATACAACAATGATGAGACTGAGAGCATGCAGTTAAAAAACACACACACACAAATAAAAGAAAGAAAAAACAATCAATTTTGGAAAGAGGGGAGAAACTGAAAAGCAAGGTTCTCACAGACAAGGATTAGAATGGAGCAAGAGCTGAAACCAGCTGCTGGAGCAGAAAGCAACCAAGCACTTAAAAGGAAAAATGGCCAGAACCAATCAGAAACCACCAGTCAGC--AAAAGAGACCAACAGCTGCGTGTAACT-----GAAGGGATGGgaaaggaagaatagggaaagggacaggaacaaggatccggaaaaagagagtaa----ggtagggaaaaagaaaagagaaa-----gtca--------ggaagggtgtaacaggcaaagaaagaaCAGTCAGAGCTACA--AACGGGGGTTTGGGAAACAGGAAAAGTAGGGAAGGATGTAGGGGCAGGAAGTGCATTAATAAAACCAGCCAAAC-TGGAGTTCAGTAACTCTGAGTAAGATGTGCAAGGGG-AAAAAAATCACCATGAAGTCAGTAATCAAACAGCTCAGACTGCTACAAAACAATATGTACATCCAAAATCCAGGCGGCATTACTCAACAGCATTGAAAATAAAAGGGGGAAAGGAAAAGGAAGAGGAACAACAAGTCAAATCACATTTTGTAGTGTTAATGTGAGATGGCAGATGGACTTTTTCTTTCTTATTTAATTGTTTTGTAATT-ACATTTTTAAAAGCTTCTTCTCTAGTGCTTTTG-TTCACTTACCGCCAACGGGCACCATCGCCAGCATTGTGTATAGTTACCATGGAAAGAGTGAGTCAAGTGAAGGGCCCTAAATGCTAAACCATTGGAAAGGAGGGGAAAAAAAGCAAAATATGCAGACATCTTACTCAAAATGGTGGCTTTTACATTTAATACTTTAAAAAACTGGGAAAGGGGAAAGGAGCCAGTTAACCTTCGATGTGTTA-TCAAAAAGGGCTGGTGAATACCAGGCGGCAGACTTGGTCATAATCACA---GTACAT-----TCGCCAGCCAGCCATCAAACCCTCTGTTTAAGAATTTTAATTCATAA-----AAATTTAGATATCAAAATTCTTGGTATTAGATATATTTAAAAACTACACGAGTTTTGGA-TTA-TTTCCTCCCTCCCCACAATCTCTAGAATCTTCTA----TTTCGTGCTTATCATGTGCACAAAGAGGCGAACTGGCCTCCCAAGAGAGAGG--ATATTGGCTGGCCCCTTGATTCATTATAGAACACAGTGTTATAAACTGGATAGTTTTT-------AGACAATT-T-AACATTAGTTTTGTTTAGGCCTGATCACAGGAATTCA----GAGTATTGCAAACTGAAGCAAAGGAAAAAAATCAAGAGAGCAGAAAGATGAACATTTTGAAGGAAAAACATGAATGAA--AAacaaacacacacacacacgcacacaca-caGTCAAAATTAAAACCCCCAAACAACCAATAAATGAGGAGGGAGGCAGATAGAAGTGTTACTTTTATACATTTTAGTGCAAGAAGGTGAAGA-----------------------AGACAGAGATACAAACACA------------CATA-----CAT------GTGCACACGCACACATAAGACAGGGTTCCAAATGTGAAATAAGTGAGGCAACACGAAAAAAGAGAAATAAAAATAT-AAACCAGAAATTGAATTATTAAAGACATGCACCTCGATTTTACGGCCCTCTACCACGGTGCCGTGTAATTTCTCCCTGGCCCTGTCTGCATCAGCACTATTCTCGAAAGTTACGAACCCGAATCCCTGCATGCAGCGGGAGAAGGGGGGAAAACATGCACATCGTTATATTGAAATACTGATCTCTTGGTAAATAGAG-AAAAAATATCATAGTATGAAACTGACATCAGCAACAACT-----CAGCAATAATCTCCCAAAGTCACATTTTTGGTCCATGCATATTT-GTAAAGGGAAA-TTAAATCCAATAAAAGAATAAAGAACTG---------------------------------t------aataataataataataat--------taacagcaatg-------------------taacagtaataaaataaAACATAAAGCATATGAGGCCAGACCAAAATTAAGGTACAGAGTTACTTGGGTCAAACTATTCAAACAAAAATCTGAAGAT-------------------------------------------------------------------------------------------TTTTTA-ATGCCCT-----------------ACCTTTCTCTCTCAA------------------------------TTCATGTTATTAATTTAATATACATGCCC----------CTTTATGTAATACTAAAAAAG-ACTTAAT---------------------------------TAAATTGACTCTCTGACATCCCAAATCTATTATTTCCCAGTAACTGCTACATGAAATCTGACATTCAGGTTCAA-CATTGCATAATGAGATTTTTTTTTAAAGTAGGTCTAATCATTTTAGCCCCACATTGCCTG-TTGCTTATATCACTATT-AATTCCTTTGGGAACAGGATAATTTAGGGCATAG--TCGGTGTACAATTTTCTATGTACTGGGTGTGGGAGAGGAGAGCATTCATGCTCTTCTAAGCAAATAAAAATATCACTAAGCAGTGGTCAATTATAACTTTTCTTCAATGCCCTTTTTAAATGACCAGATTGACAC-TTAGAGTAAAAATATGTTCAACTGAATTTCAGAAAACTGCTAACCCAAATTTGCCTAAATTACTCATTTATTGATGTTT-ATATCTGCTATTAAAGGTAG--TAGTAACTTTCTATATATA--GAGAAAAA-AGGAACAGTC-----AACAGGCAATGGGAATGAGATCTACATTAGTGACATCAGTTGTACAC----------TATTCAGTA-GAAAAAGGATATCAGAAAACAGCAATGCAGCTGGTATAA--TGACTTAGGATTA-ATTTATTTGTTCCTTGCAAGATACTATAA--AAATGGAGTGGAGCTTTAACTCATTAAGTAGACAAATCAGGAGACCAGGGAGTTGACTACCTTC------ACTCCGATGT-------------TCACAT--------------------------------ACTAC------------CAATTTTAACACCAGGAGCATTTACTATATA--------CTTATATGAC--TTTCCTAAAACATCATATTCACT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30881361 3087 + 46535552 TTTGCCTCTTCAAATTTACATT-GTGTTCAATTTGTATGGTAATAAATTTTTGTTATGAAAAGACCAATTTTAGGTAGAATTAGAACTAAAAAAAA-ACCTCTTCCTATGTCTTTTAAGATTTGTACAGTGATAA-TCCCC---CATATGAGGAAAGAGCTTGAAACTCCATTTACTCTAGCTTCGCCCACCAAATAATAT-AAACGTTTCACATTTAAAAAGAAAGAATGGGATACAACAATGATGAGACTGAGAGCATGCAGTTAAAAAACACACACACACAAATAAAAGAAAGAAAAAACAATCAATTTTGGAAAGAGGGGAGAAACTGAAAAGCAAGGTTCTCACAGACAAGGATTAGAATGGAGCAAGAGCTGAAATCAGCTGCTGGAGCAGAAAGCAACCAAGCACTTAAAAGGAAAAATGGCCAGAACCAATCAGAAACCACCAGTCAGC--AAAAGAGACCAACAGCTGTGTGTAACT-----GAAGGGATGGGAAAGGAAGAATAGGGAAAGGGACAGGAGCAAGGATCCGGAAAAAGAGAATAA----GGTAGGGAAAACGAAAAGAGAAA-----GTCA--------GGAAGGGTGTAATGGGCAAAGAAAGAACAGTCAGAGCTACA--AACAGGGGTTTGGGAAACAGGAAAAGTAGGGAAGGATGTAGGGGCAGGAAGTGCATTAATAAAACCAGCCAAAC-TGGAGTTCAGTAACTCTGAGTAAGATGTGCAAGGGGAAAAAAAATCACCATGAAGTCAGTAATCAAACAGCTCAGACTGCTACAAAACAATATGTACATCCAAAATCCAGGCGGCATTACTCAACAGCATTGAAAATAAAAGGGGGAAAGGAAAAGGAAGAGGAACAACAAGTCAAATCACATTTTGTAGTGTTAATGTGAGATGGCAGATGGACTTTTTCTTTCTTATTTAATTGTTTTGTAATT-ACATTTTTAAAAGCTTCTTCTCTAGTGCTTTTG-TTCACTTACCGCCAACGGGCACCATCGCCAGCATTGTGTATAGTTACCATGGAAAGAGTGAGTCAAGTGAAGGGCCCTAAATGCTAAACCATTGGAAAGGAGGGGAAAAAAAGCAAAATATGCAGACATCTTACTCAAAATGGTGGCTTTTACATTTAATACTTTAAAAAATTGGGAAAGGGGAAAGGAGCCAGTTAACCTTCGATGTGTTA-TCAAAAAGGGCTGGTGAATACCAGGCGGTAGACTTGGTCATAATCACA---GTACAT-----TTGCCAGCCAGCCATCAAACCCTCTGTTTAAGAATTTTA-TCCATAA-----AAATTTAGATACCAAAATTCTTGGTATTAGATATATTTAAAAACTACATGAGTTTTGGA-TTA-TTTCCTCCCTCCCCACAATCTCTACAATCTTCTA----TTTCGTGCTTATCATGCGCACAAAGAGGCGAACTGGCCTCCC--GAGAGAGG--ATATTGGCTGGCCCCTTGATTCATTATAGAACACAGTGTTATAAACTGGATAGTTTTT-------AGACAATT-T-AACATTAGTTTTGCTTAGGCCTGATCACAGGAATTCA----GAGTATTGCAAACTGAAGCAAAGGAAAAAAATCAAGAGAGCAGAAAGATGAACATTTTGAAGGAAAAACATAAATGAA--AAacaaacacacacaca--cgcacacaca-caGTCAAAATTAAAACCCCCAAACAACCAATAAATGAGGAGGGAGGCAGATAGAAGTGTTACTTTTAT--AGTTTAGTGCAAGAAGGTGAAGA-----------------------AGACAGAGATACAAACACA------------CATA-----CAT------GTGCACACACACACTTAAGACAGGGTTCCAAATGTGAAATAAGTGAGGCAATACGAAAAAAGAGAAATAAAAATAT-AAACCAGAAATTGAATTATTAAAGACATGCACCTCGATTTTACGGCCCTCTACCACGGTGCCGTGTAATTTCTCCCTGGCCCTGTCTGCATCAGCACTATTCTCGAAAGTTACGAACCCGAATCCCTGCATGCAGCGGGAGAAGGGGGGAAAACATGCACATCGTTATATTGAAATACTGATCTCTTGGTAAATAGAG-AAAAAATATCATAGTATGAAACTGACATCAGCAACAACT-----CAGCAATAATCTCCCAAAGTCACATTTTTGGTCCATGCATACTT-GTAAAGGGAAA-TTAAATCCAATAAAAGAATAAAGAACTG---------------------------------T------GATAATAATAATAAT-----------TAACAGCAATG-------------------TAACAATAATAAAATAAAACATAAAGCATATGAGGCCAGACCAAAATTAAGGTACAGAGTTACTCGGGTCAAACTATTCAACCAAAAATCTGAGGAT-------------------------------------------------------------------------------------------TTTTTA-ATGTCCT-----------------ACCTT----TCTCAA------------------------------TTCATGTTATTAATTTAATATACATGCCC----------CTTTATGTAATACTAAAAAAG-ACTTAAT---------------------------------TAAATTGACTCTCTGACATCCCAAATCTATTATTTCCCAGTAACTGCTACATGAAATCTGACATTCAGGTTCAA-CATTGCATAGTGAGATTTTTTTT-AAAGTAGGTCTAATCATTTTAGTCCCACGTTGCCTG-TTGCTTATATCACTATT-AATTCCTTGGGGAACAGGATAATTTAGGGCATAG--TCGGTGTACAATTTTGTATGTACTGGGTGTGGGAGAGGACAGCATTCATGCTCTTCTAAGCAAATAAAAATATCACTAAGCAGTGGTCAACTATAACTTTTCTTCAATGCCCATTTTAAATGACCAGATTGACAC-TTAGAGTAAAAATATGTTCAACTGAATTTCAGAAAACTGCTAACCCAAATTTGCCTAAATTATTCATTTATTGATGTTT-ATATCTGCTATTAAAGGTAG--TAGTAACTTTCTATATATA--GAGAAAAA-AGGAACAGTC-----AACAGGCAATGGGAATGAGATCTACATTAGTGACATCAGTTGTACAC----------TATTCAGTA-GAAAAAGGATATCAGAAAACAGCAATGCAGCTGGTACAA--TGACTTAGGATTA-ATTTATTTGTTCCTTGCAAGATACTACAA--AAATGGAGTGGAGCTTTCACTCATTAAGTAGACAAATCAGGAGACCAGGGAGTTGACTACCTTC------ACTCCGATGT-------------TCACGT--------------------------------ACTAC------------CACTTTTAACACCAGGAGCATTTACTATATA--------CTTATATGAC--TTTCCTAAAACATCATATTCACT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100433561 3088 - 115148730 TTTGCCTCTTCAAATTTACATT-ATGTTCAATTTGTATGGTAATAAATTTTTGTTATGAAAAGACCAATTTTAGGTAGAATTAGAACTAAAAAAA---CCTCTTCCTATGTCTTTTAAGATTTGTACAGTGATAA-TCCCC---CATGTGAGGAAAGAGCTTGAAACTCCATTTACTCTAGTTTTGCCCACCAAATAATAT-AAACATTTCACATTTAAAAAGAAAGAATGGGATACAACAATGATGAGACTGAGAGCATGCAGTTAAAAAACACACACACACAAATAAAAGAAAGAAAAAACAATCAATTTTGGAAACAGGGGAGAAACTGAAAAGCAAGGTTCTCACAGACAAGGATTAGAATGGAGCAAGAGCTGAAACCAGCTGCTGGAGCAGAAAGCAACCAAGCACTTGAAAGGAAAAATGGCCAGAACCAATCAGAAACCACCAGTCAGC--AAAAGAGACCAACAGCTGCGTGTAACT-----GAAGGGATGGGAAAGGAAGAATAGGGAAAGGGACAGGAGCAAGGATCTGGAaaaagagaataa----ggtagggaaaaagaaaagagaaa-----GTCA--------GGAAGGGTGTAACGGGCAAAGAAAGAACAGTCAGAGCTACA--AACGGGGGTTTAGGAAACAGGAAAAGTAGGGAAGGATGTAGGGGCAGGAAGTGCATTAATAAAACCAGCCAAAC-TGGAGTTCAGTAACTCTGAGTAAGATGTGCAAGGGG-AAAAAAATCACCATGAAGTCAGTAATCAAACAGCTCAGACTGCTACAAAACAATATGTACATCCAAAATCCAGGCGGCATTACTCAACAGCATTgaaaataaaa-ggggaaaggaaaaggaagaggaaCAACAAGTCAAATCACATTTTGTAGTGTTAATGTGAGATGGCAGATGGACTTTTTCTTTCTTATTTAATTGTTTTGTAATT-ACATTTTTAAAAGCTTCTTCTCTAGTGCTTTTG-TTCACTTACCGCCAACGGGCACCATCGCCAGCATTGTGTATAGTTACCATGGAAAGAGTGAGTCAAGTGAAGGGCCCTAAATGCTAAACCATTGGAAAGGAGGGGAAAAAAAGCAAAATATGCAGACATCTTACTCAAAATGGTGGCTTTTACATTTAATACTTTAAAAAATTGGGAAAGGGGAAAGGAGCCAGTTAACCTTCGATGTGTTA-TCAAAAAGGGCTGGTGAATACCAGGCAGTAGACTTAGTCACAATCACA---GTACAT-----TCGCCAGCCAGCCATCAAACCCCCTGTTTAAGAATTTTA-TCCATAA-----AAATTTAGATACCAAAATTCCTGGTATTAGATATATTTAAAAACTACATGAGTTTTGGA-TTA-TTTCCTCCCTCCCCACAATCTCTAGAATCTTCTA----TTCCGTGCTTATCATGCGCACAAAGAGGCGAACTGGCCTCCCAAGAGAAAGG--ATATTGGCTGGCCCCTTGATTCATTATAGAACGCAGTGTTATAAACTGGATAGTTTTT-------AGACAATT-T-AACATTAGTTTTGCTTAGGCCTGATCACAGGAATTCA----GAGTACTGCAAACTGAAGCAAAGGAAAAAAATCAAGAGAGCAGAAGGATGAACATTTTGAAGGaaaaacataaatgaa--aaacaaacacacacacacgcacacacaca-cagtcaaaattaaaaCCCCCAAACAACCAATAAATGAGGAGGGAGGCAGAAAGAAGTGTTACTTTTATACATTTTAGTGCAAGAAGGTGAAGA-----------------------AGacagagatacaaacaca------------caca-----cat------gtgcacacgcacacaTAAGACAGGGTTCCAAATGTGAAATAAGTGAGGCAATACGAAAaaagagaaataaaaatat-aaaccagaaattgaattaTTAAAGACATGCACCTCGATTTTACGGCCCTCTACCACGGTGCCGTGTAATTTCTCCCTGGCCCTGTCTGCATCAGCACTATTCTCGAAAGTTACGAACCCGAATCCCTGCATGCAGCGGGAGAAGGGGGGAAAACATGCACATCGTTATATTGAAATACTGATCTCTTGGTAAATAGAG-AAAAAATATCATAGTATAAAACTGACATCAGCAACAACT-----CAGCAATAATCTCCCAAAGTCACATTTTTGGTCCATGCATGTTT-GTAAAGGGAAA-TTAAATCCaataaaagaataaagaactg---------------------------------t------aataataataataag-----------taacagcaatg-------------------taacaataataaaataaaacataaAGCATATGAGGCCAGACCAAAATTAAGGTACAGAGTTACTCGGGTCAAACTATTCAACCAAGAATCTGAAGAT-------------------------------------------------------------------------------------------TTTTTA-ATGTCCT-----------------ACCTTTCTCTCTCAA------------------------------TTCATGTTATTAATTTAATATACATGCCC----------CTTTATGTAATACTAAAAAAG-ACTTAAT---------------------------------TAAATTGACTCTCTGACATCCCAAATCTATTATTTCCCAGTAACTGCTACATGAAATCTGACATTCAGGTTCAA-CATTGCATAATGAGATTTTTTTTTAAAGTAGGTCTAATCATTTTAGCCCCACGTTGCCTG-TTGCTTATATCACTATG-AATTCCTTTGGGAACAGGATAATTTAGGGCATAG--TCGGTGTACAATTTTGTATGTACTGGGTGTGGGAGGGGAGAGCATTCATGCTCTTCTAAGCAAATAAAAA-ATCACTAAGCAGTGGTCAATTATAACTTTTCTTCAATGCCCATTTTAAATGACCAGATTCAC-----AGAGTAAAAATATGTTCAACTGAATTTCAGAAAACTGCTAACCCAAATTTGCCTAAATTATTCATTTATTGATGTTTAATATCTGCTATTAAAGGTAG--TAGTAACTTTCTATATAGA--GAGAAAAA-AGGAACAGTC-----AACAGGCAATGGGAATGAGATCTACATTAGTGACATCAGTTGCACAC----------TATTCAGTA-GAACAAGGGTATCAGAAAACAGCAATGCAGCTGGTACAA--TGCCTTAGGATTA-ATTTATTTGTTCCTTGCAAGATACTACAA--AAATGCAGTGGAGCTTTAACTCATTAAGTAGACAAATCAGGAGACTAGGGAGTTGACTACCTTC------ACTCCGATGT-------------TCACGT--------------------------------ACTAC------------CAATTTTAACACCAGGAGCATTTACTATATA--------CTTAGATGAC--TTTCCTAAAACG--ATACTCACT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80581564 3083 + 95678458 TTTGCCTCTTCAAATTTACATT-GTGTTCAATTTGTATGGTAATAAATTTGTGTGATGAAAAGACCAATTTTAGGTAGAATTAGAACTAAAAAAA------CTTCCTATGACTTTTGAGATTTGTACAGTGATACTTCCCC---TACATGAGGAAAGAGCTTGAAACTCCATTTACTCTAGTTTCATCCACCAAATAATAT-AAACATTTCACATTTAAAAAGAAAGAATGGGATACAACAATGATGAGACTGAGAGCATGCAGTTAAAAAACACACACACACAAATAAAAGAAAGAAAAAACAATAAATTTTGGAAAGAGGGGAGAAAGTGAAAAGCAAGGTTCTCACAGACAAGGATTAGAATGGAGCAAGAGCTGAAACCAGCTGCTGGAGCAGAAAGCAACCAAGCACTTAAAAGGAAAAATGGCCAGAACCAATCAGAAACCACCAGTCAGC--AAAAGAGACCAACAGCTGCGTGTAACT-----GAAGGGATGGGAAAGGAAGAATAGGGAAAAGGACAGGAGCAAGGATTTGGAAAAAGAGAATAA----GGTAGGGAAAAAGAAAAGAGAAA-----GTCA--------GGAAGGGTGTAACGGGCAAAGAAAGAACAATCAGAGCTACA--AACGGGGATTTGGGAAACAGGAAAAGTAGGGAAGGATGTAGGGGCAGGAAGTGCATTAATAAAACCAGCCAAAC-TGGAGTTCAGTAACTCTGAGTAAGATGTGCAAGGGG-AAAAAAATCACCATGAAGTCAGTAATCAAACAGCTCAGACTGCTACAAAACAATATGTACATCCAAAATCCAGGCGGCATTACTCAACAGCATTGAAAATAAAAGGGGGAAAGGAAAAGGAAGAGGAACAACAAGTCAAATCACATTTTGTAGTGTTAATGTGAGATGGCAGATGGACTTTTTCTTTCTTATTTAATTGTTTTGTAATT-ACATTTTTAAAAGCTTCTTCTCTAGTGCTTTT--TTCACTTACCGCCAACGGGCACCATCGCCAGCATTGTGTATAGTTACCATGGAAAGAGTGAGTCAAGTGAAGGGCCCTAAATGCTAAACCATTGGAAAGGAGGGGAAAAAAAGCAAAATATGCAGACATCTTACTCAAAATGGTGGCTTTTACATTTAATACTTTAAAAAATTGGGAAAGGGGAAAGGAGCCAGTTAACCTTCGATGTGTTA-TCAAAAAGGGCTGGTGAATACCAGGTGGCAGACTTAGTCATCATCACA---GTACAT-----TCGCCAGCCAGCCATCAAACCCTCTGTTTAAGAATTTTA-TCCATAA-----AAATTTAGATATCAAAATTCTTGATATTAGATATATTCAAAAACTACATGAGTTTTGGA-TTA-TTTCCTCCCTCCCCACAATCTCTAGAATCTTCTA----TTCCGTGCTTATCATGTGCACAAAGAGGCGAACTGGCCTCCCAAGAGAGAGG--ATATTGGCTGGCCCCTTGATTCATTATAGAACACAGTGTTATAAACTGGATAGTTTTT-------AGACAATT-T-AACATTAGTTTTGCTTAGGCCTGATCACAGGAATTCA----GAGTACTGCAAACTGAAGCAAAGGAAAAAAATCAAGAGAGCAGAAGGATGAACATTTTGAAGGAAAAACATAAATGAA--AAac--acacacacacacgcacacacaAA-AAGTCAAAATTAAAACCCCCAAACAACCAATAAATGAGGAGGGAGGCAGATAGAAGTGTTACTTTTATACATTTTAGTGCAAGAAGGT---GA-----------------------AGACAGAGATACAAACACA------------CATA-----CAT------GTGCACACGCACACACAAGACAGGGTTCCAAATGTGAAACAAGTGAGGCAATACGAAAAAACAGAAATAAAAATATAAAACCAGAAATTGAATTATTAAAGACATGCACCTCGATTTTACGGCCCTCTACCACGGTGCCGTGTAATTTCTCCCTGGCCCTGTCTGCATCAGCACTATTCTCGAAAGTTACGAACCCGAATCCCTGCATGCAGCGGGAGAAGGGGGGAAAACATGCACATCGTTATATTGAAATACTGATCTCTTGGTAAATAGAG-AAAAAATATCATAGTATGAAACTGACATCAGCAACAACT-----CAGCAATAGTCTCCCAAAGTCACATTTTTGGTCCATGCATATTT-GTGAAGGGAAA-TTAAATCCAATAAAAGAATAAAGAACTG---------------------------------T------AATAATAATAATAAT-----------TAACAGCAATG-------------------TCAC---AATAAAATAAAACATAAAGCATACGAGGCCAGACCAAAATTAAGGTACAGAGTTACTTGGGTCAAACTATTCAACCAAGAATCTGAAGAT-------------------------------------------------------------------------------------------TTTTTA-ACGTTCT-----------------ACCTTTCTCTCTCAA------------------------------TTCATGTTATTAATTTAATATATATGCCC----------CTTTATGTAATACCAAAAAAG-ACTTAAT---------------------------------TAAGTTGACTCTCTGACATCCCAAATCCATTATTTCCCAGTAACTGCTACATGAAATCTGACATTCAGGTTCAA-CGTTGCACAATGAGATTTTTTTT-AAAGTAGGTCTAATCATTTTAGCCCCATGTTGCCGG-CTGCTTATATCACTACT--ATTCCTTTGGGAACAGGATAATTTAGGACATAG--TTGTTGTATAATTTTGTATGTACTGGGTGTGGAAGAGAAAAGCATTCATGCTCTTCTAAGCAAATAAAAATATCGCTAAGCAGTGGTCAATTATAACTTTTCTTCAATGCCCATTTTAAATGACCAGATTGACAC-TCAGAGTAAAAATATGTTCAATTGAATTTCAGAAAACTGCTAACCCAAATTCGCCTAAATTACTCACTTATTGATTTTT-ATATCTGCTATTAAAGGTAG--TAGTAACTTTCTATATATA--GAGAAAAA-AGGAACAGTC-----AACAGGCAATGGGAACGAGATCTACATTAGTGACATCAGTTGTTCAC----------TATTCAGTA-GAAAAAGGATATCGGAAAACAGCAGTGCAGCTGGTACAG--TAAGTTAGGATTA-ATTTATTTGTTCCTTGCAAGATACTACAA--AAATGGAGTGGAGCTTTAACTCATCAAGTAGACAAACCAGGACACCAGGGAGTTGACTACCTTC------ACTCCGACAT-------------TCACGT--------------------------------ACTAC------------CAATTTTAACACTAGGAGCGTTTACTACATA--------CTTATAAGAC--TTTCCTAAAACATCATATTCACT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81008382 3083 - 96509753 TTTGCCTCTTCAAATTTACATT-GTGTTCAATTTGTATGGTAATAAATTTGTGTGATGAAAAGACCAATTTTAGGTAGAATTAGAACTAAAAAAA------CTTCCTATGTCTTTTGAGATTTGTACAGTGATACTTCCCC---TACATGAGGAAAGAGCTTGAAACTCCATTTACTCTAGTTTCATCCACCAAATAATAT-AAACATTTCACATTTAAAAAGAAAGAATGGGATACAACAATGATGAGACTGAGAGCATGCAGTTAAAAAACACACACACACAAATAAAAGAAAGAAAAAACAATAAATTTTGGAAAGAGGGGAGAAAGTGAAAAGCAAGGTTCTCACAGACAAGGATTAGAATGGAGCAAGAGCTGAAACCAGCTGCTGGAGCAGAAAGCAACCAAGCACTTAAAAGGAAAAATGGCCAGAACCAATCAGAAACCACCAGTCAGC--AAAAGAGACCAACAGCTGCGTGTAACT-----gaagggatgggaaaggaagaatagggaaaaggacaggagcaaggatttggaaaaagagaataa----ggtagggaaaaagaaaagagaaa-----gtca--------ggaagggTGTAACGGGCAAACAAAGAACAATCAGAGCTACA--AACGAGGATTTGGGAAACAGGAAAAGTAGGGAAGGATGTAGGGGCAGGAAGTGCATTAATAAAACCAGCCAAAC-TGGAGTTCAGTAACTCTGAGTAAGATGTGCAAGGGG-AAAAAAATCACCATGAAGTCAGTAATCAAACAGCTCAGACTGCTACAAAACAATATGTACATCCAAAATCCAGGCGGCATTACTCAACAGCATTgaaaataaaagggggaaaggaaaaggaagaggaaCAACAAGTCAAATCACATTTTGTAGTGTTAATGTGAGATGGCAGATGGACTTTTTCTTTCTTATTTAATTGTTTTGTAATT-ACATTTTTAAAAGCTTCTTCTCTAGTGCTTTT--TTCACTTACCGCCAACGGGCACCATCGCCAGCATTGTGTATAGTTACCATGGAAAGAGTGAGTCAAGTGAAGGGCCCTAAATGCTAAACCATTGGAAAGGAGGGGAAAAAAAGCAAAATATGCAGACATCTTACTCAAAATGGTGGCTTTTACATTTAATACTTTAAAAAATTGGGAAAGGGGAAAGGAGCCAGTTAACCTTCGATGTGTTA-TCAAAAAGGGCTGGTGAATACCAGGTGGCAGACTTAGTCATCATCACA---GTACAT-----TCGCCAGCCAGCCATCAAACCCTCTGTTTAAGAATTTTA-TCCATAA-----AAATTTAGATATCAAAATTCTTGATATTAGATATATTCAAAAACTACATGAGTTTTGGA-TTA-TTTCCTCCCTCCCCACAATCTCTAGAATCTTCTA----TTCCGTGCTTATCATGTGCACAAAGAGGCGAACTGGCCTCCCAAGAGAGAGG--ATATTGGCTGGCCCCTTGATTCATCATAGAACACAGTGTTATAAACTGGATAGTTTTT-------AGACAATT-T-AACATTAGTTTTGCTTAGGCCTGATCACAGGAATTCA----GAGTACTGCAAACTGAAGCAAAGGAAAAAAATCAAGAGAGCAGAAGGATGAACATTTTGAAGGAAAAACATAAATGAA--AAac--acacacacacacgcacacacaAA-AAGTCAAAATTAAAACCCCCAAACAACCAATAAATGAGGAGGGAGGCAGATAGAAGTGTTACTTTTATACATTTTAGTGAAAGAAGGT---GA-----------------------AGACAGAGATACAAACACA------------CATA-----CAT------GTGCACACGCACACACAAGACAGGGTTCCAAATGTGAAATAAGTGAGGCAATACGAAAAAACAGAAATAAAAATATAAAACCAGAAATTGAATTATTAAAGACATGCACCTCGATTTTACGGCCCTCTACCACGGTGCCGTGTAATTTCTCCCTGGCCCTGTCTGCATCAGCACTATTCTCGAAAGTTACGAACCCGAATCCCTGCATGCAGCGGGAGAAGGGGGGAAAACATGCACATCGTTATATTGAAATACTGATCTCTTGGTAAATAGAG-AAAAAATATCATAGTATGAAACTGACATCAGCAACAACT-----CAGCAATAGTCTCCCAAAGTCACATTTTTGGTCCATGCATATTT-GTGAAGGGAAA-TTAAATCCaataaaagaataaagaactg---------------------------------t------aataataataataat-----------taacagcaatg-------------------tcac---aataaaataaaacataaAGCATACGAGGCCAGACCAAAATTAAGGTACAGAGTTACTTGGGTCAAACTATTCAACCAAGAATCTGAAGAT-------------------------------------------------------------------------------------------TTTTTA-ACGTTCT-----------------ACCTTTCTCTCTCAA------------------------------TTCATGTTATTAATTTAATATATATGCCC----------CTTTATGTAATACCAAAAAAG-ACTTAAT---------------------------------TAAGTTGACTCTCTGACATCCCAAATCCATTATTTCCCAGTAACTGCTGTATGAAATCTGACATTCAGGTTCAA-CGTTGCACAATGAGATTTTTTTT-AAAGTAGGTCTAATCATTTTAGCCCCATGTTGCCGG-CTGCTTATATCACTACT--ATTCCTTTGGGAACAGGATAATTTAGGACATAG--TTGTTGTATAATTTTGTATGTACTGGGTGTGGAAGAGAAAAGCATTCATGCTCTTCTAAGCAAATAAAAATATCGCTAAGCAGTGGTCAATTATAACTTTTCTTCAATGCCCATTTTAAATGACCAGATTGACAC-TCAGAGTAAAAATATGTTCAATTGAATTTCAGAAAACTGCTAACCCAAATTCGCCTAAATTACTCACTTATTGATTTTT-ATATCTGCTATTAAAGGTAG--TAGTAACTTTCTATATATA--GAGAAAAA-AGGAACAGTA-----AACAGGCAATGGGAACGAGATCTACATTAGTGACATCAGTTGTTCAC----------TATTCAGTA-GAAAAAGGATATCGGAAAACAGCAGTGCAGCTGGTACAG--TAAGTTAGGATTA-ATTTATTTGTTCCTTGCAAGATACTACAA--AAATGGAGTGGAGCTTTAACTCATCAAGTAGACAAACCAGGACACCAGGGAGTTGACTACCTTC------ACTCCGACAT-------------TCACGT--------------------------------ACTAC------------CAATTTTAACACTAGGAGCGTTTACTATATA--------CTTATAAGAC--TTTCCTAAAACATCATATTCACT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76265457 3083 + 90941950 TTTGCCTCTTCAAATTTACATT-GTGTTCAATTTGTATGGTAATAAATTTGTGTGATGAAAAGACCAATTTTAGGTAGAATTAGAACTaaaaaaa------CTTCCTATGTCTTTTGAGATTTGTACAGTGATACTTCCCC---TACATGAGGAAAGAGCCTGAAACTCCATTTACTCTAGTTTCATCCaccaaataatat-aaacatttcacatttaaaaagaaagaatgggataCAACAATGATGAGACTGAGAGCATGcagttaaaaaacacacacacacaaataaaagaaagaaaaaacaataaattttggaaagaggggagaaagtgaaaagCAAGGTTCTCACAGACAAGGATTAGAATGGAGCAAGAGCTGAAACCAGCTGCTGGAGCAGAAAGCAACCAAgcacttaaaaggaaaaatggcCAGAACCAATCAGAAACCACCAGTCAGC--AAAAGAGACCAACAGCTGCGTGTAACT-----GAAGGGATGGGAAAGGAAGAATagggaaaaggacaggagcaaggatttggaaaaagagaataa----ggtagggaaaaagaaaagagaaa-----gtca--------ggAAGGGTGTAACGGGCAAAGAAAGAACAATCAGAGCTACA--AACGGGGATTTGGGAAACAGGAAAAGTAGGGAAGGACGTAGGGGCAGGAAGTGCATTAATAAAACCAGCCAAAC-TGGAGTTCAGTAACTCTGAGTAAGATgtgcaagggg-aaaaaaatcaccatgAAGTCAGTAATCAAACAGCTCAGACTGCTACAAAACAATATGTACATCCAAAATCCAGGCGGCATTACTCAACAGCATTGAAAATAAaagggggaaaggaaaaggaagaggaacaaCAAGTCAAATCACATTTTGTAGTGTTAATGTGAGATGGCAGatggactttttctttcttatttaattgttttgtaatt-acatttttaaaagcttcttctctagtgctttt--ttCACTTACCGCCAACGGGCACCATCGCCAGCATTGTGTATAGTTACCATGGAAAGAGTGAGTCAAGTGAAGGGCCCTAAATGCTAAACCATtggaaaggaggggaaaaaaagcaaaatatgcaGACATCTTACTCAAAATGGTGGCTTTTacatttaatactttaaaaaattgggaaaggggaaaggagccAGTTAACCTTCGATGTGTTA-TCAAAAAGGGCTGGTGAATACCAGGTGGCAGACTTAGTCATCATCACA---GTACAT-----TCGCCAGCCAGCCATCAAACCCTCTGTTTAAGAATTTTA-TCCATAA-----AAATTTAGATATCAAAATTCTTGATATTAGATATATTCAAAAACTACATGAGTTTTGGA-tta-tttcctccctccccacaatctCTAGAATCTTCTA----TTCCGTGCTTATCATGTGCACAAAGAGGCGAACTGGCCTCCCAAGAGAGAGG--ATATTGGCTGGCCCCTTGATTCATTATAGAACACAGTGTTATAAACTGGATAGTTTTT-------AGACAATT-T-AACATTAGTTTTGCTTAGGCCTGATCATAGGAATTCA----GAGTACTGCAAActgaagcaaaggaaaaaaatcaagagagcAGAAGGATGAacattttgaaggaaaaacataaatgaa--aaac--acacacacacacgcacacacaca-aagtcaAAATTAAAACCCCCAAACAACCAATAAATGAGGAGGGAGGCAGATAGAAGTGttacttttatacattttagtgcAAGAAGGT---GA-----------------------AGACAgagatacaaacaca------------cata-----cat------gtgcacacgcacacacaagaCAGGGTTCCAAATGTGAAATAAGTGAGGCAATacgaaaaaacagaaaaaaaaatataaaaccagaaaTTGAATTATTAAAGACATGCACCTCGATTTTACGGCCCTCTACCACGGTGCCGTGTAATTTCTCCCTGGCCCTGTCTGCATCAGCACTATTCTCGAAAGTTACGAACCCGAATCCCTGCATGCAGCGGGAGAAGGGGGGAAAACATGCACATCGTTATAATGAAATACTGATCTCTTggtaaatagag-aaaaaatatcatAGTATGAAACTGACATCAGCAACAACT-----CAGCAATAGTCTCCCAAAGTCACATTTTTGGTCCATGCATATTT-GTGAAGGGaaa-ttaaatccaataaaagaataaagaactg---------------------------------t------aataataataataat-----------taacagcaatg-------------------tcac---aataaaataaaacataaagcataTGAGGCCAGACCAAAATTAAGGTACAGAGTTACTTGGGTCAAACTATTCAACCAAGAATCTGAAGAT-------------------------------------------------------------------------------------------TTTTTA-ACGTTCT-----------------ACCTTTCTCTCTCAA------------------------------TTCATGTTATTAATTTAATATACATGCCC----------CTTTATGTAATACCAAAAAAG-ACTTAAT---------------------------------TAAATTGACTCTCTGACATCCCAAATCCATTATTTCCCAGTAACTGCTACATGAAATCTGACATTCAGGTTCAA-CGTTGCacaatgagatttttttt-aaagtaggtcTAATCATTTTAGCCCCACATTGCCGG-CTGCTTATATCACTACT--ATTCCTTTGGGAACAGGATAATTTAGGACATAG--TTGTTGTATAATTTTGTATGTACTGGGTGTGGAAGAGGAAAGCATTCATGCTCttctaagcaaataaaaatatcgCTAAGCAGTGGTAAATTATAACTTTTCTTCAATGCCcattttaaatgaccagattgACAC-TCAGAGTAAAAATATGTTCAATTGAATTTCAGAAAACTGCTAACCCAAATTCGCCTAAATTACTCACTTACTGATTTTT-ATATCTGCTATTAAAGGTAG--TAGTAACTttctatatata--gagaaaaa-aggaacagTC-----AACAGGCAATGGGAACGAGATCTACATTAGTGACATCAGCTGTTCAC----------TATTCAGCA-GAAAAAGGATATCGGAAAACAGCAGTGCAGCTGGTACAA--TAAGTTAGGATTA-ATTTATTTGTTCCTTGCAAGATACTACAA--AAATGGAGTGGAGCTTTAACTCATCAAGTAGACAAACCAGGACACCAGGGAGTTGACTACCTTC------ACTCCGACGT-------------TCACGT--------------------------------ACTAC------------CAATTTTAACACTAGGAGCGTTTACTATATA--------CTTATAAGAC--TTTCCTAAAACATCATATTCACT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18535278 3079 + 33263144 TTTGCCTCTTCAAATTTACATT-GTGTTCAATTTGTATGGTAATAAATTTGTGTGATGAAAAGACCAATTTTAGGTAGAATTAGAACTAAAAAAA---CTTCTTCCTATGTCTTTTGAGATTTGTACAGTGATACTTCCCC---TACATGAGGAAAGAGCTTGAAACTCCATTTACTCTAGTTTCATCCACCAAATAATAT-AAACATTTCACATTTAAAAAGAAAGAATGGGATACAACAATGATGAGACTGAGAGCATGCAGTTAAAAAACACACACACACAAATAAAAGAAAGAAAAAACAATAAATTTTGGAAAGAGGGGAGAAAGTGAAAAGCAAGGTTCTCACAGACAAGGATTAGAATGGAACAAGAGCTGAAACCAGCTGCTGGAGCAGAAAGCAACCAAGCACTTAAAAGGAAAAATGGCCAGAACCAATCAGAAACCACTAGTCAGC--AAAAGAGACCAACAGCTGCGTGTAACT-----gaagggatgggaaaggaagaatagggaaaaggacaggagcaaggatttggaaaaagagaataa----ggtagggaaaaagaaaagagaaa-----gtca--------ggaagggTGTAACGGGCAAAGAAAGAACAATCAGAGCTACA--AACGGGGATTTGGGAAACAGGAAAAGTAGGGAAGGATGTAGGGGCAGGAAGTGCATTAATAAAACCAGCCAAAC-TGGAGTTCAGTAACTCTGAGTAAGATGTGCAAGGGG-AAAAAAATCACCATGAAGTCAGTAATCAAACAGCTCAGACTGCTACAAAACAATATGTACATCCAAAATCCAGGCGGCATTACTCAACAGCATTgaaaataaaagggggaaaggaaaaggaagaggaaCAACAAGTCAAATCACATTTTGTAGTGTTAATGTGAGATGGCAGATGGACTTTTTCTTTCTTATTTAATTGTTTTGTAATT-ACATTTTTAAAAGCTTCTTCTCTAGTGCTTTT--TTCACTTACCGCCAACGGGCACCATCGCCAGCATTGTGTATAGTTACCATGGAAAGAGTGAGTCAAGTGAAGGGCCCTAAATGCTAAACCATTGGAAAGGAGGGGAAAAAAAGCAAAATATGCAGACATCTTACTCAAAATGGTGGCTTTTACATTTAATACTTTAAAAAATTGGGAAAGGGGAAAGGAGCCAGTTAACCTTCGATGTGTTA-TCAAAAAGGGCTGGTGAATACCAGGTGGCAGACTTAGTCATCATCACA---GTACAT-----TCGCCAGCCAGCCATCAAACCCTCTGTTTAAGACTTTTA-TTCATAA-----AAATTTAGATATCAAAATTCTTGATATTAGATATATTCAAAAACTACATGAGTTTTGGA-TTA-TTTCCTCCCTCCCCACAATCTCCAGAATCTTCTA----TTCCGTGCTTATCATGTGCACAAAGAGGCGAACTGGCCTCCCAAGAGAGAGG--ATATTGGCTGGCCCCTTGATTCATTATAGAACACAGTGTTATAAACTGGATAGTTTTT-------AGACAATT-T-AACATTAGTTTTGCTTAGGCCTGATCACAGGAATTCA----GAGTACTGCAAACTGAAGCAAAGGAAAAAAATCAAGAGAGCAGAAGGATGAACATTTTGAAGGAAAAACATAAATGAAacacac--acacacacacacgcacacacaAA-AAGTCAAAATTAAAACCCCCAAACAACCAATAAATGAGGAGGGAGGCAGATAGAAGTGTTACTTTTATACATTTTAGTGCAAGAAGGT---GA-----------------------AGACAGAGATACAAACACA------------CATA-----CAT------GTGCACACGCACACACAAGACAGGGTTCCAAATGTGAAATAAGTGAGGCAATACGAAAAAACAGAAATAAAAATATAAAACCAGAAATTGAATTATTAAAGACATGCACCTCGATTTTACGGCCCTCTACCACGGTGCCGTGTAATTTCTCCCTGGCCCTGTCTGCATCAGCACTATTCTCGAAAGTTACGAACCCGAATCCCTGCATGCAGCGGGAGAAGGGGGGAAAACATGCACATCGTTATATTGAAATACTGATCTCTTGGTAAATAGAG-AAAAAATATCATAGTATGAAACTGACATCAGCAACAACT-----CAGCAATAGTCTCCCAAAGTCACATTTTTGGTCCATGCATATTT-GTGAAGGGaaa-ttaaatccaataaaagaataaagaactg---------------------------------taataacaataataataataat-----------taacagcaatg-------------------tcac---aataaaataaaacataaAGCATATGAGGCCAGACCAAAATTAAGGTACAGAGTTACTTGGGTCAAACTATTCAACCAAGAATCTGAAGAT-------------------------------------------------------------------------------------------TTTTTA-ACATTCT-----------------ACCTTTCTCTCTCAA------------------------------TTCATGTTA-----TTAATATACATGCCC----------CTTTATGTAATACCAAAAAAG-ACTTAAT---------------------------------TAAATTGACTCTCTGACATCCCAAATCCATTATTTCCCAGTAACTGCTACATGAAATCTGACATTCAGGTTCAA-CGTTGCACAATGAGA-TTTTTTT-AAAGTAGGTCTAATCATTTTAGCCCCACTTTGCCGG-CTGCTTATATCACTACT--ATTCCTTTGGGAACAGGATAATTTAGGACATAG--TCGGTGTATAATTTTGTATGTACTGGGTGTGGAAGAGGAAAGCATTCATGCCCTTCTAAGCAAATAAAAATATCGCTAAGCAGTGGTCAATTATAACTTTTCTTCAATGCCCATTTTAAATGACCAGATTGACAC-TTAGAGTAAAAATATGTTCAACTGAATTTCAGAAAACTGCTAACCCAAATTCGCCTAAATTACTCACTTATTGATTTTT-ATATCTGCTATTAAAGGTAG--TAGTAACTTTCTATATAGA--GAGAAAAA-AGGAACAGTC-----AACAGGCAATGGAAATGAGATCTACATTAGTGACATCAGTTGTTCAC----------TATTCAGTA-GAAAAAGGATATTGGAAAACAGCAGTGCAGCTGGTACAA--TGAGTTAGGATTA-ATTTATTTGTTCCTTGCAAGATACTACAA--AAATGGAGTGGAGCTTTAACTCATCAAGTAGACAAATCAGGACACC---------ACTACCTTC------ACTCCGATGT-------------TCACGT--------------------------------ACTAC------------CAATTTTAACACTAGGAGCATTTACTATATA--------CTTATATGAC--TTTCCTAAAACATCATATTCACT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198238580 3082 + 210400635 TTTGCCTCTTCAAATTTACATT-GTATTCAATTTGT-TGGTGATAAATTTGTGTTATGAAAAGACCAATTTCAAGTAGAATTAGAACTAAAAAAA---CCTCTTCTTATGTCTTTTAAGATCTGTACAGTGACACTCCCCC---TACATGAGGAAAGAGCTTGAAACTCCATTTACTCTAGTTTTACCCACTAAATAATAT-AAACATTTCACATTTAAAAAGAAAGAATGGGATACAACAATGATGAGACTGAGAGCATGCAGTTAAAAAACACACACACACAAAT----GAAAGAAAGAACAATCAATTTTGGAAAGAAGGGAGAAAGTGAAAAGCAAGGTTCTCACAGACAAGGATTAGAATGGAGCAAAAGCTGAAACCAGCTGCTGGAGCAGAAAGCAACCAAGCACTTAAACGGAAAAATGGCCAGAACCAATCAGAAACCACCAGTCAGCGAAAAAGGGACCAAGAGCTGCATGTAACT-----GAAGGGATGAGAAAGG-AGAATAGGGAAAAGGACAGGAGCAAGGATTTGGAGAAAGAGAATAA----GGTAGGGAAAAAG--------AA-----GTCA--------GGAAGGGTGTAATGGGCAAAGAAAGAACAGTCAGAGCTACA--AACATGGGTTTGGGAAACAGAAAAAGTAGGGAAGGAAGTAGGGGCAGGAAGTGCATTAATAAAACCAGCCAAAC-TGGAGTTCAGTAACTCTGAGTAAGATGTGCAAGGGG-AAAAAAATCACCATGAAGTCAGTAATCAAACAGCTCAGACTGCTACAAAACAATATGTACATCCAAAATCCAGGCGGCATTACTCAACAGCATTGAAAATAAAAGGGGGAAAGGAAAAGGAAGAGGAACAACAAGTCAAATCACATTTTGTAGTGTTAATGTGAGATGGCAGATGGACTTTTTCTTTCTTATTTAACTGTTTTGTAATT-ACATTTTTAAAAGCTTCTTCTCTAGTGCTTTTGTTTCACTTACCGCCAACGGGCACCATCGCCAGCATTGTGTATAGTTACCATGGAAAGAGTGAGTCAAGTGAAGGGCCCTAAATGCTAAACCATTGGAAAGGAGGGGAAAAAAAGCAAAATATGCAGACATCTTACTCAAAATGGTGGCTTTTACATTTAATACTTTAAAAAATTGGGAAAGGGGAAAGGAGCCAGTTAACCTTCGATGTGTTA-ACAAAAAGGGCTGGTGAATACCAGGTGGTAGACTTAGTCATAATCACA---GTACAT-----TCGCCAGCCAGCCATCAAACCCTCTGTTTAAGAATTTTA-TCCATAA-----AAATTTAGCTATCAAAATTCTTCGTATTAGATATATTTAAAAACTATATGAGTTTTGGATTTT-TTTCCTCCCTCCCCACAATCTCTAGAATCTTCTA----TTCTGTGCTTATCATGCGCACATAGAGGCAAACTGGCCTCCCA--AGAGAGG--ATATTGGCTGGCCCCTTGATTCATTATAGAACACAGTGTTATAAATTGGATAGTTTTTTTTTTTAAAACAATT-TAAACATTAGTTTTGCTTAGGCCTGATCACAGGAATTCA----GAGTCTTGCAAACTGAAGCAAAGGAAAAAAATCAAGAGAGCAGAAGGATGAATATTTTGGAGGAAAAACATAAATGAA--AAAC--ATACACACACAC----------A-AAGTCAAAATTAAAACCCCCAAACAACCAATAAATGAGGAGGGAGGCAGACAGAAGTGTTACTTTTATACATTTTAGTGCAAGAAGGTGAAGA-----------------------AGACAGAGATACAAACACA------------CATA-----CAT------GTGCACGCGCACACACAAGACAGGGTTCCAAATGTGAAATAAGTGAGGCAATACAAAAAAAGAGAAATAAAAATAT-AAACCAGAAATTGAATTATTAAAGACATGCACCTCGATTTTACGGCCCTCTACCACGGTGCCGTGTAATTTCTCCCTGGCCCTGTCTGCATCAGCACTATTCTCGAAAGTTACGAACCCGAATCCCTGCATGCAGCGGGAGAAGGGGGGAAAACATGCACATCGTTACATTGAAATACTGATCTCTTGGTAAATAGAG-AAAAAATATCATAGTGTGAAACTGACATCAGCAACAACT-----CAGCAATAGTCTCCCAAAGTCACATTTTTGGTCCATGCATATTT-GTAAAGGGAAA-TTAAATCCAATAAAAGAATAAAGAACTG---------------------------------t------aataataataataat-----------taacagcaatg-------------------taataataataaaataaAACATAAAGCATATGAGGCCAGACCAAAATTAAGGTACAGAGTTACTCGGGTCAAACTACTCAACCAAGAATCTGAAGAT-------------------------------------------------------------------------------------------TTTTTA-ATGTCCT-----------------ACCTTTCTCTATCAA------------------------------TTCATGTTATTAATTTAATGCACATGCCC----------CTTTATGTAATATTAAAAAAT-ACTTAAT---------------------------------TAAATTGACTCTCTGACATCCCAAATCTATTATTTCCCAGTAACCGCTACATGAAATCTGATATTCAGGTTCAA-CATTGCATAATGAGA-TTTTTTT-AAAGTAGGGCTAATCATTTTAGCCCCTTGTTG-CTG-TTGCATCTATCACTATTAAATTTCTTTGGGAACAGGATAATTTAGGACATAG--TCAGTGTACAATTCTGTATGTACTGGGTGTGGAAGAGGAGAGCATTTATGTTCTTCTAAGCAAATAAAAACATCACTAAACAGCGGTCAATTATAACTTTTCTTCAATGCCCATTTTAAATGACCAGATTGGCAC-TTGGTGTAAATATATGTTCAACTGAATTTCAGAAAACTGCTAACCCAAATTTGCCTAAATTATACATTTATTGATAGTT-ATGTATGCTATTAAATGTAG--TAGTAATTTTCTATATATA--GAGAAAAA-AGAAACAATC-----AATGGGCAATGGGAATGAGATCTACATTAGTGACATCAGTT---CACAGAAAAAGAATATTC-GTA-GAAAAAGAATATTGGAAAATAGCAATGCAGTTGGTACAA--CGAGTTAGGAATA-ATTTACTTGTTCCTTGCAAGAGACTACAA--AAATGGAGTGGAACTTTAATTCATTAAATAGACAAATCAGGAGACCA-GGAGCTGACTAACTTC------ACTCCTTTGT-------------TCAT-T--------------------------------ACTAC------------CAATTTTAACACAAGTACCATTTACCATTCA--------CTTACATGAC--TTTCATAAAACATCATATTAACT i calJac3.chr1 C 0 C 0 s mm10.chr15 77103850 3078 + 104043685 ttcgcctctagggatATACACT-GTACTAGATTTATGT------------------TAAGAAGACCAATTTTGGGTAAAAGTAGAATTTAAAAA-------CATCTGATGTTTTGTGACCCTC-------------TCCCCCTTCCTGTGTGAAGACAGCTTGAAACTCCATTTACTCGAGTTTGA-CCACCAGATAATGT-AAACATTTCACATTTACAAAGAAAGAATGGGAGACAACAACGATGAGATTGAGAGCATGCAGTTA--------ACACACACAAAGAAAAGAAAGAAACAAC--------TGGGAAAGAAGAGGGAAAGTGAGCAGCAAGG----------------TTGGAATGGAGCAAGGGCTTGAACCAGCTGCTAGAGCAGAAAGCCACCAAGCAATTCAAAGGAAGACCAGCCAGAACCAAGCAGACACTACCAGTCAGC--AAGAGACACCCACAGCTCCAGACAGC-----------GAGGGACAGGGAGGAAGAAAGGAAGGGGCAGGAATGGGAAGTCAGGGAAACAACAGAG---TGGTAGGGGAGAATAGGAGAGAAC-----ATGA--------GG-AGGGTGTC--------------AGCAGGAAGAGCTGCATGGGCGGGGG---------CGGGAGGAGCTGGGGAAG-----GGGGCAG--AGTGCATTAATAAAACCAGCCAAAC-TGGAGTTCAGTAACTCTGAGTAAGATGCGCAAGGGGGAAAAAAATCACCATGAAGTCAGTAACCAAACAGCTCAGACTGCTACAAGACAGGATGTACATCCAAAGTCCAGGCGACACCACCC-ACAGCAGTGGAAATAAAAGGGG----CGGGAAGGGAGAGA---AGCAAGTCAAACCACATCTGGTAGTGTTAATGTGAGATGGCAGATGGACTTTTTCTCTC----TTAATTGTTTTGTGATT-ACATTTTAAAAAGCTTCTTCTCTAGCACTTTCAATTCACTTACCGCCAACGGGCAC---CGCCAGCATTGTGTATAGTTACCATGGAAAGAGTGAGGCAAGTGAAGGGCCCTAAATGCTAAACCATCGGAA---AGGGGAAAAAAAGCAAAATATGCAGACATCTTACTC-AAATGGTGGCTTTTATATTTAATACTTTAAAAAACTGGGAAAGGGGAGAGGAGCCAGTTAACCTTCAATTTGTTAGTCACTCTACGCTGGTGAGC-CCAGG--GCTGACTTTGCAATCACAACATCTGTCCATCAGTGCCACCAGCT-GCCCCTGAACCCTCTG-TTGAGACTGTTA-TTTGTCACCTTTGGAGTCAAGCCTTGAAGTTCTTGGTATTAAGTAAAATTTAAAATGATCAGAGTTTTGGA-TTC-TGACCCCC-------CAACCACTATAATCATCTA-----TCCACACTTATCCAACACACTTGGAGGGGAACTGGCCTCC----------------------------------------AAGACACAATGCTACAAGCTAGATGGTTTTT-------AGACATTT-TTGAAATTAGTTTTGCTTAGGCCTCATTATAGGAACTCA----GAGTCTTGCAAACTGAAGCAAAGGAAAAAAAAT-CGAGAGCAGAAGGATGAACATTTTGGAAGAGGGAAAAAAGTGAA--AAACAGGTAAGCACACATCCCCGCCC-------TCCAAATT--AACCCTCGAACAACCAAGAGC--AGGGGAGAAGCTGACAGAATTGTTACTTTTA--CAGTGTAGTGCAAGAAGGTGAAGACAGACACAGACAGGAGTGCACACAGACAGGAGTGCACACACAGAGATAGGAATGCAAA-----CATGAACAGGTGTGCACACATGGACAGGACAGGG-TCCAAAGGTG----AAGTGAGGCAGTAC--ACAAAGAGAAAGAAAACCAT-AAACGAGAAATTGAATTATTGAAGACATGCACCTCGATTTTACGGCCCTCTACCACGGTGCCGTGCAATTTCTCCCTGGCCCTGTCTGCATCAGCACTATTCTCGAAAGTTACGAACCCGAATCCCTGCATGCAGCGGGAGAA---GGGAAAACATGCACATCGTTATATTGAAATACTCATCTCTTGGTAAACAG-----AAAACATCACAGTATGAAG-TGACGCCAGC-ACAACTAACACCAGCAAT-TTCTTCCAAAGGCACATTTTTGATCCATGCATATTTCATAAAGGGAAATTTAAACCCAATAAAAGGATAAAGCACTG---------------------------------T------AATAATAACAGTAAC-----------TTAATTAACTG-------------------TAATAACAATAAAATAAAATATAATGTATGTGAGGCCAGACCAAGACTAAGGTAGGAAGTTACTCAGGTCAAACTATTCAACCAAAAATCTGAACATACAAAATCAAACCAAACCATAAAGCtattattattattattattatGTGCACATGTATGCACTGGTGCAGGTGGAGGGCAGGGCAGAGATAGTTGCA-ATGTCTTTACTGACTGCTCCAACAAGCCATCTCTCTCTAGATGTTGTCGCCGTTGTCATCGTCGTCGTCTTCTTctttttaactgagcactgaggatcaaacccaggtcctcatgc-ttgcaagagaagtactttataaactcagcaatctttctagatccTGTTTTCTCTCAACTGACTCTCTGAC-CCTGAAATCCATACTTCTCTGCTAACTGCTGTGTAAAAACTCACATTCAAG-------GTTACATAACGAGA-----CGT-AAGGGAG------TTAGCTCAACCCTGTTTTACCTG-GGTCTTACACTACTGTC------TTTTGGGAGAAAGATAACTTAAGACAGTA--GTGAGGTCTAGTTCAGTGGGTAACAGCTGTG-------------------------CAAGCAAGCATAACTATCACC-GGAAATGGACAACTAGGATTTTG------------------------AGATTGGTACTTTATGGAAAATGTGTGTATGGCTGAATTTCTGGAAA----------AAA----CCTATATTATAGATCTGTTGATGTCT-ATCTCTGCTGTAAGAGGCAAATTAGTGATTTTTTCCCCATG--AGGAAAAGCAGGAATAGTCACGTGAACAGGCATCAGGAGTGAAG--AATGTTAGTAACAGTGGTTATCCAC----------TGTTCAATAGGGAAGAAGCCAT--GAAGGAGGTAATGCGGCAGCTGCCATGTGGGTCAGGATTAGAATAATGTGTCCTGTATCAGATAC---AA--AGAC-------AGCTC---------------ACAAACAACAAGGCCAGGGGCTAACCTACCCTCTGCTCAACTCTGCTATTCCCAGGGACAGCTCACCC--------------------------------ACCACAGGACGACAGCGTGACTATCTCATCAAGTGCCCATCCCCCATATCTATAACTTTATGTCAC--TTTTCTAGCATTTTACACCTGCC i mm10.chr15 I 204 I 318 s canFam3.chr10 40863122 3110 - 69331447 -TTGCCTCTGGGAATTTACATTAAAGTTAAATTTGTATGATGATAAATTTGTGTTATGGAAAGACCAATTTTAGGTGGAACTGGGGCCAAAAAAA---AGTCTCAATAAGTCTTTTAGGATTTGCAGAGTGGGAACTTTCC---TTTGTAAGGGAAAA----GAAACTCCATTTACTCTAGTTTGACCCATCAAATAGTATAAAACATTTCACATTTAAAAAGAAAGAATGGGATACAACAATGATGAGACTGAGAGCATGCAGTTA--AAACACACACACACAAATAAAAGAAAGAAAAAACAATCAGTTTTGGAAAGAAGGGAGAAAGTGAAGAGCGAGGTTCTCATAGACAAGGATTAGAATGGGGTCAGAGCTTACGCTAGCCGCTAGAGCAGAATGC-ACCAAGCGC-TAAAAGGAAAAATGGCCAGAACCAATCAGAAACCACCAGTCAGC----AAGAGACCAATAGCCGCAGGTAAACAGAGAGAAGGGGTGGGAGAGACAG---AGGGAATAGAGTGGGAAC-AGAACTTGGGGGAAGAGAGCAAGAAGGAAGGGGAAAACGCAAAGAGAAATGGGTGTCACGGGCAGTGAAGAGCTGTCAAGGTCAAGGAAAGAACAGTGAGAGCTACA--GACAGAGGTCTGGGGAAGGGGA---------AAGGAAGTAGGGGCAGGAAGTGCATTAATAAAACCAGCCAAACTTGGAGTTCAGTAACTCTGAGTAAGATGTGCAAGGGG-AAAAAAATCACCATGATGTCAGTAATCAAACAGCTCAGACTGCTACAA-ACAATATGTACATCCAAAGTCCAGGCGGCATTACTCAACAGCATTGAAAATAAAAGGGGGAAAGGAAAAGGAAGAGG---AACAAGTCAAATCACATTTTGTAGTGTTAATGTGAGATGGCAGATGGACTTTTTCTTTCTTATTTAATTGTTTTGTAATTAACAATTGAAAAAGCTTCTTCTCTAGTGCTTTGT-TTCACTTACCGCCAACGGGCACCATCGCCAGCATTGTGTATAGTTACCATGGAAAGAGTGAGTCAAGTGAAGGGCCCTAAATGCTAAACCATCGGAAAGGGAGGG--AAAAAGCAAAATATGCAGACATCTTACTCAAAATGGTGGCTTTTATAGTTCATACTTTTAAAAACTGGGAAAGGGGAAAGGAGCCAGTTAACCTTCACTGCGTTA-TTAAAAAGGGTTG----------------------------------A---ATAACC-----CCATGAGGCTGTCGTTGAGCCCTCTGTCTGAGGATTTTA-TCCATCA-----A-------CTGTGGAAATCCTTGATTGTAAACGTATTTAAAAACTCCATGAGTTTTGGG-TTCTTTTTTTCCCTCCCCACCACCTCTGCAGTCTTGTACTCCTTCCTTGCTTATCACACGCCCATGGAGGCGAACTGGCCACCTAAGAGAGAGGATATATTGGCTGGCTCCTTGAGTCATTACAGGACACAATGTCACACATTGGATAGTTTTT-------AGACAGTCAT-AAAGTTAGTTTTATTTTGGCCTGATCACAGGTATTCATACGGAGTCTCGCAAACTGAAGCAAAGGAAAAAAATCAAGAGAGCAGAAGGATGAACATTTTGGAGGAAAAAAGTAAATGAG--AAACAAATACACATTTACACGCACACAAGTAAATCAAAATGAACCCCCCCCAACAACCAAAAAATGAGGGGAG-----GACAGAAGTGTTACGTTTACACATTTTAGTGCAAGAATGTGAAGG-----------------------ACACAGAGACATACACACA------------CGTAATGTGTGT------GTGCAGACACACACACAAGACAGGGCTCCAGATGTGAAATAAGTGAGGGAATACACAAAAAGAGAAATAAAAATAT-AAACCAGAAGTTGAATTATTGAAGACATGCACCTCGATTTTACGGCCCTCTACCACGGTGCCGTGTAATTTCTCCCTGGCCCTGTCTGCATCAGCACTATTCTCGAAAGTTACGAACCCGAATCCCTGCATGCAGCGGGAGAAGGGGGGAAAACATGCACATCGTTATATTGAAATACTGATCTCTTGGTAAACAGAGAAAAAAATATCACAGTATGAAACTGACATCAGCAACAACT-----CAGTAATACTCTCCCAAAGTCACATTTTTGGTCCATGCATATTTGGTAAAGGGAAA-TTAAATCCAATAACAGAATATAGAACTGCAGtagtagtagtaataataataataataataat------aataataataataataatagcaacaacaacaataatgataatgtgatcaacaacaataactataataaaataaAACATAAAGCATGTGAGGCCAGACCAAAATTAAGGTACAGAGTTACTCGGGTCAAATTCTTCCACCAAGAATCTGAACAT-------------------------------------------------------------------------------------------TTTTTAGATGCTCT---------------------TTCTCTTTCAA------------------------------TTCATCCTGTTAATTTACT------GTTC----------CTTTATGTAATACTAAAAAAT-ACTGAAT---------------------------------T---------------------AAATCCGTCATTCCCCAGTAACTTCTACATGAAGCCTTCCATTTAGGTGCAATCACTGTATAAGGAGA---GTTTT------AGATCTCATCATTTTAGCTCCACTTTGCCTGTTTGCCTGTATCACCACA--ATTCCTCTGGGAAGAGAATAATTTAAAACATAGCCTCGATCTACAATTCTGTAGGTATGAGGTGTGGAAGAG---AGCACCCATCTTCATCTAAGCTAATCAAAATATCACTAAGCAGTTGCCAATTATGCCTTTTCTTCAATG--AATTTTAAACAACCAGACTGGTAC-TCAGAGTAAAAATAGGTTCAGCTGAATTCCAGAAAATAGCTTATCCAAATTTGCCTAAATTACACATTTGTTGAAGCCT-ACATCTGCTACTAAATGTAT--TAGTAATTTTCCATATAGAGGGGGAAAAA-AGGAATAATC-----AA-AGGCACTGCAAATGAGATCTATGTTAGTGACATCAGTTGTATAT----------TGTTCAACA-CAAAAGGAATGCCATAAAATA-------AGTTGCTACTC--TGAGTTAGAAGTA-ATTTATTTGCTCACTGTA------TACAAATAAATCATATAGAACTTTAATTCATTAAGTGGACAAAACA-GAGAGCAGGGAGTTAACCCACTT-------ACTCCTGTAT-------------TCACATTTATCTGAAAAGACGGTCTTGGTCATAACCAAACCAT------------CAATGTCAAAAGCGGCAGGATTTACTACATA--------TTTATATGACTATTTCATCAAGCATTAGATCAGTT i canFam3.chr10 C 0 C 0 a score=972196.000000 s hg38.chr22_KI270876v1_alt 90492 285 + 263666 TCATTCTAGGTGCTCTGTCCTTATCGTTCTACTCTGCAGCTATAATTTTACAAATAATTTCCATGCTGCTTATATCTGCAAAGTGGTAAAGTCTTAGGATTTTCT-ACAAAGTCTTCATTTGCCAATAACTTCATTGTCCTGCTAG----CGTTTTTTGAATATTCCACTGTAGGATAACCCAGAACCCTTTA------ATTTTAACTGAAGTTCTGCCTAGCTGCTTAATAACATGAGCACAATTCTCTCTATATAAAACATGTTCTTAACTGACACGGTAAACAATGCGCGTTG s panTro4.chr22 34468073 284 + 49737984 TCATTCTAGGTGCTCTGTCCTTATCGTCCTACTCTGCAGCTATAATTTTACAAAAAATTTCCATG-TGCTTATATCTACAAAGTGGTGAAGTCTTAGGATTTTCT-ACAAAGTCTTCATTTGCCAATAACTTCATTGTCCTGCTAG----CGTTTTTTGAATATTCCATTGTAGGATAACCCAGAACCCTTTA------ATTTTAACTGAAGTTCTGCCTAGCTGCTTAATAACATGAGCACAATTCTCTCTATATAAAACATGTTCTTAACTGACACGGTATACAATGCGCGTTG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30884448 285 + 46535552 TCATTCTAGGTGCTCTGCCCTTATCGTTCTACTCTGCAGCTATAATTTTATAAATAATTTCCAGGCTGCTTATATCTGCAAAGTGGTAAAGTCTTAGGATTTTCT-GCAAAGTCTTCATTTGCCAATAACTTCATTGTCCTGCTAG----CGTTTTTTGAATATTCCATTGTAGGATAACCCAGAACCCTTTA------ATTTTAACTGAAGTTCTGCCTAGCTGCTTAATAACATGAGCACAATTCTCTCTATATAAAACATGTTCTTAACTGACACGGTAAACAATGCGCGTTG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100436649 285 - 115148730 TCATTCTAGGTGCTCTGTCCTTATTGTTCTACTCTGCAGCTATAATTTTACAAATAATTTCCATGCTGCTTATATCTGCAAAGTGGTAAAGTCTTAGGAGTTTCT-GCAAAGTCTTCATTTGCCAATAACTTCATTGTCCTGCTAG----CGTTTTTTGAATATTCTATTGTAGGATAACCTAGAATCCTTTA------ATTTTAACTGAAGTTCTGCCTAGCTGCTTAATAACATGAGCACACTTCTCTCTATATAAAACATGTTCTTAACTGACACGGTAAACAATGCGCGTTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80584647 285 + 95678458 TCATTCTAGTTGCTCTGTTCGTATTGTTCTACTCTGCAGCTGTAATTTTACAAACAATTTCCACGCTGCTTATATCTGCAAAGTGGTAAAGTCTTAGGATTTTCT-GCAAAGTCTTCATTTGCCAATAACTTCATTGTCCTGCTAG----CATTTTTTGAACATTCCATTATGGGATAACCCAGAACCCTTTA------ATTTTAATTGAAGTTCTGCCTAGCTGCTTAATAACATGAGCATACTTCTCTCTATATAAACCATGTTCTTAACTGACACGGTAAACAAAGCACGTTG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81011465 285 - 96509753 TCATTCTAGTTGCTCTGTTCTTACTGTTCTACTCTGCAGCTGTAATTTTACAAACAATTTCCACGCTGCTTATATCTGCAAAGTGGTAAAGTCTTAGGATTTTCT-GCAAAGTCTTCATTTGCCAATAACTTCATTGTCCTGCTAG----CATTTTTTGAACATTCCATTATGGGATAACCCAGAACCCTTTA------ATTTTAATTGAAGTTCTGCCTACCTGCTTAATAACATGAGCATACTTCTCTCTATATAAACCATGTTCTTAACTGACACGGTAAACAAAGCACGTTG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76268540 285 + 90941950 TCATTCTAGTTGCTCTGTTCTTATTGTTCTACTCTGCAGCTGTAATTTTACAAACAATTTCCACGCTGCTTATATCTGCAAAGTGGTAAAGTCTTAGGATTTTCT-GCAAAGTCTTCATTTGCCAATAACTTCATTGTCCTGCTAG----CATTTTTTGAACATTCCATTATGGGATAACCCAGAAcccttta------attttaattgaagTTCTGCCTAGCTGCTTAATAACATGAGCATACTTCTCTCTATATAAACCATGTTCTTAACTGACACGGTAAACAAAGCACGTTG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18538357 285 + 33263144 TCATTCTAGTTGCTCTGTTCTTATTGTTCTACTCTGCAGCTGTAATTTTACAAACAATTTCCACGCTGCTTATATCTGCAAAGTGGTAAAGTCTTAGGATTTTCT-GCAAAGTCTTCATTTGCCAATAACTTCATTGTCCTGCTAG----CATTTTTTGAATATTCCATTATAGGATAACCCAGAACCCTTTA------ATTTTAATTGAAGTTCTGCCTAGCTGCTTAATAACATGAGCATACTTCTCTCTATATAAAACATGTTCTTAACTGACATGGTAAACAATGCACGTTG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198241662 286 + 210400635 TCATTCTAGGTGCTTTGTTCTTATCATTCTACTTCGCAGCTATAATTTTACAAATAATTTCCATGCTATTTATATCTGCAAAGTAGTAAAGTATTAGGATTTTCT-GCAAAGTCTTCATTTGCCAATAACTTCATTGTCTTGCTAG---TTATTTTTTGAAAATTCTACTGTAGGATAACCCAGAACCCTTTA------ATTTTAACTGAAGTTCTGCCTAGCTGCTTAATAACATGAGCATACTTCTCTCTATAAAAAACATGTTCTTAACTGACATGGTAAACAATGTGCATTG i calJac3.chr1 C 0 C 0 s canFam3.chr10 40866232 282 - 69331447 CCAACTTAGGCGCTTTGTCCTCTT--TTCCACTCTGCAACTGTAACATT--------CTTTCAAGCTATTTACATGTGTAGACTAGTAAATTCTTAAGATTTTCTGGGAAAGTCCTCATTTCTCAATAGCTT-ACTGTCCCTCTAGCATTCATTCTTTGAACATTCCACTGTAAGATAACCTGGAACCCTTTGCTATTTATTTTTACTGAAGTTCTGCTTCGCTGCC---CTCCATGAGTCCTTCCATATATATACAAAATGTGTTCTTAACTGAGATGGTCAACAGTGTGCATTG i canFam3.chr10 C 0 C 0 e mm10.chr15 77106928 318 + 104043685 I a score=1674965.000000 s hg38.chr22_KI270876v1_alt 90777 457 + 263666 CTTAATAAAATTTTATAAAAGCAACTCCATTGTTTTGAAGGATCTGATAA--CTCAGCATTCTAAGTGATTATG-TGGGTGGGTGGTG--TTTTGGAGAATTCCAATGGATGATCTCTACCCACAATTTGGACATCAC---AAAT-ACCCTTGAAAGCAAAATGCTAAGCTGATAGAGATTTTAAAACGTATGTTGCTTGGAATGAAATACTACTGGTAATTTCAGTTAATACTCTCCTAAAGAATGTGTAAGTTTGTTGAAAATATCAACAGGAACATATTTTTATAAATGAAATTTTGATATCAACAT-TTATAGCCACTTTGAC-ACCACAAGGTATAAAAGGGC--ACATTAATAATTAGTTATACCA-TTTGTCATCT----ACACTAGCACCTGCTGAAGACAAGCTGCCAGTTCTCTAATCCTAG--TGAGTCCTCCAATAGGAAAGT----CAAACTTTTAAAGAAAGGTCAC s panTro4.chr22 34468357 458 + 49737984 CTCAATAAAATTTTATAAAAGCAACTCCATTGTTTTGAAGGATCTGATAA--CTCAGCATTCTAAGTGATTATG-TGGGTGGGTGGCG--TTTTGGAGAATTCCAATGGATGATCTCTACCCACAATTTGGACATCAC---AAAT-ACCCTTGAAAGCACAATGCTAAGCTGACAGAGATTTTAAAACGTATGTTGCTTGGAATGAAATACTACTGGTAATTTCAGTTAATACTCTCCTAAAGAATGTATAAGTTTGTTGAAAATACCAACAGAAACATATTTTTATAAATGAAATTTTGATATCAACAT-TTATAGCCACTCTGAC-ACCACAAGGTATAAAAGGAC--ACATTAATAATTAGTTATACCA-TTTGTCATCT----ACACTAGCACCTGCTGAAGACAAGCTGCCAGTTCTCTAATCCTAG-TTGAGTCCTCCAATAGGAAAGT----CAAACTTTTAAAGAAAGGTCAC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30884733 457 + 46535552 CTCAATAAAATTTTATAAAAGCAACTCCATTGTTTTGAAGGATCTGATAA--CTCAGCAATCTAAGTGATTATG-TGGGTGGGTGGCG--TTTTGGAGAATTCCAATGGATGATCTCTACCCACAATTTGGACATCAC---AAAC-ACCCTTGAAAGCACAATGCTAAGCTGATAGAGATTTTAAAACGTATGTTGCTTGGAATGAAATACTACTGGTAATTTCAGTTAATACTCTCCTAAAGAATGTATAAGTTTGTTGAAAATATCAACAGGAACATATTTTCATAAATGAAATTTTGATATCAACAT-TTATAGCCACTTTGAC-ACCACAAGGTATAAAAGGGC--ACATTAATAATTAGTTATACCA-TTTGTCACCT----ACACTAGCACCTGCTGAAGACAAGCTGCCAGTTCTCTAATCCTGG--TGAGTCCTCCAATAGGAAAGT----CAAACTTTTAAAGAAAGGTCAC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100436934 457 - 115148730 CTCAATAAGATTTTATAAAAGCAACTCCATTGTTTTGAAGGATCTGATAA--CTCAGCATTCTAAGTGATTATG-TGGGTGGGTGGCG--TTTTGGAGAATTCCAATGGATGACCTCTACCCACGATTTGGACATCAC---AAAT-ACCCTTGAAAGCGCAATGCTAAGCTGATAGAGATTTTAAAACATATGTTGCTTGGAATGAAATACTACTGGTAATTTCAGTTAATACTCTCCTAAAAAATGTATAGGTTTGTTGAAAATATCGACAGGAACATATTTTCATAAATGAAATTTTGATATCAACAT-TTATAGCCACTTTGAC-AACACATGGTATAAAAGGAC--ACATTAATAATTAGTTATACCA-TTTGTCATCT----ACACTAGCACCTGCTGAAGACAAGCTGCCAGTTCTCTAATCCTGG--TGAGTCTTCCAATAAGAAAGT----CAAACTTTTAAAGAAAGGTCAG i nomLeu3.chr7b C 0 I 388 s rheMac3.chr10 80584932 459 + 95678458 CTCAATAAGATTTTATAAAAGCAACTCCATTGTTTTGAAGGATCCGGTAA--CTCAGCATTCTAAGTGATTATG-TGGGTGGGTGGCG--TTTTGGAGAATTCCAATGGATGATCTCTACCCACAATTTGGACATCAC---AAAT-ACCCTTGAAAGTGCAACGCTAAGCTGATGGAGATTTTAAAACGTACGTTGCTTGGAAAGAATTACTACTGGTAACTTCAGTTAATATTCTCCTAAAGAATGTATAAGTTTGTTGAAAATATCAACAGGAACATATTTTCATAAATGAAATGTTGATATCAACAT-TTATAGCCACTTTGAC-ACCACAAGGTATAAAAAGGCGCACATTAATAATTAGTTACACCA-TTTGTCATCT----ACACTAGCACCTGCTGAAGACAAGCTGCCAGTTCTCTAATCCTGG--TGAGTCCTCCAACAGGAAAGT----CAAACTTTTAAAGAAAGGTCAC i rheMac3.chr10 C 0 I 2 s macFas5.chr10 81011750 453 - 96509753 CTCAATAAGATTTTATAAAAGCAACTCCATTGTTTTGAAGGATCCGGTAA--CTCAGCATTCTAAGTGATTATG-TGGGTGGGTGGCG--TTTTGGAGAATTCCAATGGATGATCTCTACCCACAATTTGGACATCAC---AAAT-ACCCTTGAAAGTGCAACGCTAAGCTGATGGAGATTTTAAAACGTACGTTGCTTGGAAAGAATTACTACTGGTAACTTCAGTTAATATT---CTAAAGAATGTATAAGTTTGTTGAAAATATCAACAGGAACATATTTTCATAAATGAAATGTTGATATCAACAT-TTATAGCCACTTTGA----CACAAGGTATAAAAGGGCGCACATTAATAATTAGTTACACCA-TTTGTCATCT----ACACTAGCACCTGCTGAAGACAAGCTGCCAGTTCTCTAATCCTGG--TGAGTCCTCCAACAGGAAAGT----CAAACTTTTAAAGAAAGGTCAC i macFas5.chr10 C 0 I 2 s papAnu2.chr10 76268825 459 + 90941950 CTCAATAAGATTTTATAAAAGCAACTCCATTGTTTTGAAGGATCCGGTAA--CTCAGCATTCTAAGTGATTATG-TGGGTGGGTGGCG--TTTTGGAGAATTCCAATGGATGATCTCTACCCACAATTTGGACATCAC---AAAT-ACCCTTGAAAGTGCAACGCTAAGCTGATGGAGATTTTAAAACGTATGTTGCTTGGAAAGAATTACTACTGGTAACTTCAGTTAATATTCTCCTAAAGAATGTATAAGTTTGTTGAAAATATCAACAggaacatattttcataaatgaaatGTTGATATCAACAT-TTATAGCCACTTTGAC-ACCACAAGGTATAAAAGGGCGCACATTAATAATTAGTTACACCA-TTTGTCATCT----ACACTAGCACCTGCTGAAGACAAGCTGCCAGTTCTCTAATCCTGG--TGAGTCCTCCAACAGGAAagt----caaacttttaaagaaaggtCAC i papAnu2.chr10 C 0 I 2 s chlSab2.chr19 18538642 456 + 33263144 CTCAATAAGATTTTATAAAAGCAACTCCATTGTTTTGAAGGATCCGGTAA--CTCAGCATTCTAAGTGATTATG-TGGGTGGGTGGCG--TTTTGGAGAATTCCAATGGATGATCTCTACCCACAATTTGGACATCAC---AAAT-ACCCTTGAAAGTGCAACGCTAAGCTGATGGAGATTTTAAAACGTACGTTGTTTGGAAAGAACTACTACTGGTAACTTCAGTTAATATTCTCCTAAAGAATGTATAAGTTTGTTGAAAATATCAACAGGAACATATTTTCATAAATGAAATGTTGTTATCAACAT-TTATAGCCACTCTGAC-ACCACAAGGTATAAAAGGGCGTACATTAATAATTAGTTACACCA-TTTGTCATCT----ACACTAGCACCTGCTGAAGACAAGCTGCCAGTTCTCTAATCCTGG--TGAGTCCTC---CAGGAAAGT----CAAACTTTTAAAGAAAGGTCAC i chlSab2.chr19 C 0 I 2 s calJac3.chr1 198241948 455 + 210400635 CTCAATAAGATTTTATAAAAGCAACTCTATTTTTCTGAAGGATCTGATAA--CTCAGCATTCTAACTGATTATG-TGGGTGGGTGGCG--TTTTGGAGAATTCCAATGGTTGATCTCTACCCACAATTTGGACATCAC---AAAT-ACTCTTGAAAGTGCAATGCTAAGCTGATAGAAAATTTAAAATGTATGTTGCTTGGGATGAAATACTACTGGTAATTTCAGCTGATACTCGCCTATAGAATGCGTAA-TTTGTTGAAAATATCAACAGAAAC-TATTTTCATAAATGAAATTTTGGTATCAACAT-TTATAGCCACTTTGAT-ACCACAAGGTATAAAAGGGC--ACATTAATAATTAGTTATACCA-TTTGTCATCT----ACACTAGCACCTGCTGAAGATAAGCTGCCAGTCCTCTAATCCTGG--TGAGTCCCCCAACAAGAAAGT----CAGACTTTTAAAGGAATGTCAC i calJac3.chr1 C 0 I 2 s mm10.chr15 77107246 437 + 104043685 CCCAACAGATCTTTATAAAAGC---------------AAGGATGTGCTGATCCTCAGCAGGCTAACTGGTCGTGTTGGGTAGGTGGTG---TCTGAAAGATTCCAATAGCTTATCTCTGCCCG-AGCCTGAGTACCACTATAAAT-ACCACAGGAGG-GCAG-GCTCTGTTGACAGAGGAC---AAATGAATCTTCACTGTGGTGGAATACTA-GGGTAACTTT--TTAGCACTCTCCTACAGAATGTATATACTGGTTGAAAATAGTAATAGGAAAGTATTTTCAGAAACAAA--TTTAATACTAACATGTTGTAGCCACTTTGACAACCCCGAGGTACTAAAGGCA-------AATTATGAAGGATGCCAGTCTCTTTTCTCAGAAGATAAACAGACTCTGAGGACAAGGAGCCAATTCT---ACCCAAGAGTCTATCACCTGGCAGGCAAGG----CAAGCTGGTTTAAGAAGGCCAG i mm10.chr15 I 318 C 0 s canFam3.chr10 40866514 462 - 69331447 CTCAGTAAGATTTTAGAAAAGCAACTCCATCATTTTGAAGGATCTGATTA--CTTTGCATTCTACATGATAGTA-TGGTTGGATGGCGGGCCATGGAGGATCCCAATGGATTATCTCTACCTGTAATTTGTATATCACCACAAATAACTCTAGAAAGTTCAATGCTAAGCTGACAGAAAATATTAAATGTACACTGCTTGAGGTGGACGAGTACAGGTCATTTTAGTTACTTTTCTTACAAAG-----TTAAGTATGTTGAAAATGTCAATGGAAACATATTTTCAGAAAC-AAATTTTAATACCAATATGTTACAGCTTCATTGAC-AACTAGAGGTATCCTATCTC--AAGTTACTAATTAATGACATCA-TTTGTTATCT----ACACTAGCATCTGCTGAAGACAGGAAGCCAGCTCTCCAATCCTGG--AGATTCCTCCAACAGAAAAGTTAAGTAAACCTTTCAAGAAAGGTCAC i canFam3.chr10 C 0 C 0 a score=28842.000000 s hg38.chr22_KI270876v1_alt 91234 7 + 263666 --AGAGTGA s panTro4.chr22 34468815 7 + 49737984 --AGAGTGA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30885190 7 + 46535552 --AGAGTGA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100437779 7 - 115148730 --AGAGTGA i nomLeu3.chr7b I 388 C 0 s rheMac3.chr10 80585393 7 + 95678458 --AGAGTGA i rheMac3.chr10 I 2 C 0 s macFas5.chr10 81012205 7 - 96509753 --AGAGTGA i macFas5.chr10 I 2 C 0 s papAnu2.chr10 76269286 7 + 90941950 --AGAGTGA i papAnu2.chr10 I 2 C 0 s chlSab2.chr19 18539100 7 + 33263144 --AGAGTGA i chlSab2.chr19 I 2 C 0 s calJac3.chr1 198242405 7 + 210400635 --AGAGTGA i calJac3.chr1 I 2 C 0 s mm10.chr15 77107683 7 + 104043685 --GAGGTGA i mm10.chr15 C 0 I 176 s canFam3.chr10 40866976 9 - 69331447 AGACAGCGA i canFam3.chr10 C 0 C 0 a score=1881581.000000 s hg38.chr22_KI270876v1_alt 91241 537 + 263666 TGAGTTTTAATATCACACTTTAAGGGCA-TT-TTGGCTGTATTTCAACTGGTCCTTACAG--TCATATATTTTATGACTTAGGTTAAATTAATACATTGTAAATTAATAGTTGGATTACTATTAAG-TTATATGAAAACTAAGACCT-AGGTTTTTGATATTAGCATTATGA----CTATAT---CTACACACC-CACATACAAA-TATACATACTAGTTTT--TCTTCTTAAATataaccatgaa------gtaaaaagaataga-catattggtttcattttgaaggtaaagaaactgagtcgaactgagattaagtacccaagga----------------------------------tatccagctaatggtgagaaaatt-----ctaagccttttcaaatctcagttcagtattctatttactaaa--ctatattAGTCCTAAAATCCTTCTA---TCTTTTTTCAAATCTAATTGCTAAGTATCTTCCATAACCTTCTTTTCTGAAATGTGTTGAAAGAACATTAGTGATACAATAACTGCATCCAAAAGAATGGAAGGTGGTATGATGAGCACTGCAATTTCACAGTCAGCAAATG s panTro4.chr22 34468822 537 + 49737984 TGAGTTTTAATATCACACTTCAAGGGCA-TT-TTGGCTGTATTTCAACTGGTCCTCACAG--TCATATATTTTATGACTTAGGTTAAATTAATACATTGTAAATTAATAGTTGGATTACTATTAAG-TTATATGAAAACTAAGACCT-AGGTTTTTGATATTAGCATTATGA----CTATAT---CTACACACC-CACATACAAa-tatacatactagtttg--tcttcttaaatataaccatgaa------gtaaaaagaataga-catattggtttcaatttgaaggtaaagaaactgagtcgaactgagattaagtacccaagga----------------------------------tatccagctaatggtgagaaaatt-----ctaagccttttcaaatctcagttcagtattctatttactaaa--ctataTCAGTCCTAAAATCCTTCTA---TCTTTTTTCAAATCTAATTGCTAAGTATCTTCCATAACCTTCTTTTCTGAAATGTGTTGAAAGAACATTAGTGATACAATAACTGCATCCAAAAGAATGGAAGGTGGTATGATGAGCACTGCAATTTTACAGTCAGCAAATG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30885197 537 + 46535552 TGAGTTATAATATCACACTTTAGAAGCA-TT-TTGGCTGTATTTCAACTGGTCCTCACAG--TCATATATTTTATGACTTAGGTTAAATTAATACATTGTAAATTAATAGTTGGATTACTATTAAG-TTATATCAAAACTAAGACCT-AGGTTTTTGATATTAGCATTATGA----CTATAT---CTACACACC-CACATGCAAA-TATACATACTAGTTTG--TCTTCTTAAATataaccatgaa------gtaaaaagaataga-catgttggtttcattttgaaggtaaagaaactgagtcgaactgagattaagtacccaagaa----------------------------------tatccagctaacggtgagaaaatt-----ctaagccttttcaaatctcagttcagtattctatttactaaa--ctatattAGTCCTAAAATCCTTCTA---TTTTTTTTCAAATCTAATTGCTAAGTATCTTCCATGACCTTCTTTTCTGAAATGTGTGGAAAGAACATTAGTGAGACAATAACTGCATCCAAAAGAATGGAAGGTGGTATGATGAGCACTGCAATTTCACAGTCAGCAAATG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100437786 538 - 115148730 TGAGTTTTAATATCATACTTCAGAAGCA-TT-TTGGCTGTATTTCAACTGGTCCTCACAG--TCATATATTCTATGACTTAGGTTAAATTAATACATTGTAAATTAATAGTTGGATTACTATTAAG-TTATATGAAAACTAAGACCT-AGGTTTTTGATACTAGCATTATGA----CTATAT---CTACACACC-CACATACAAa-tatacatactaatttg--tcttcttaaatataaccatgaa------gtaaaaagaataga-catgttggtttcattttgaaggtaaagaaactgagttaaactgagattaagtatccaagga----------------------------------tatccagctaatggtgaggaaatt-----ctaagccttttcaaatctcagttcagtattctatttactaaacTCTATATTAGTCCTAAAATCCTTCT----TTTTTTTTCAAATCTAATTGCTAAATATCTTCCATAACCTTCTTTTCTAAAATGTGTTGAAAGAACATTAGTGATACAATAACTGCATCCGAAACAATGGAAGGTGGTATGATGAGCACTGCAATTTCACAGTCAGCAAATG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80585400 529 + 95678458 TGAATTTTAATATCACACTTTAGAAGAA-TT-TTGGCTGTATTTCAACTGGTCCTCACAG--TCATATATTTTATGACTTAGGTTAAATTAATACATTGTAAATTAATAGTTGGATTACTATTAAG-TTATATGAAAACTAAGACCT-AGGTTTTTGATATTAGCATTATGA----CTATAT---CTACACACCATACATACAAA----ACGTACTAGTTTG--TCTTCTTAAATataaccatgaa------gtaaaaagaataga-catgttggtttcatgttgaaggtaaagaaactgagtcaaactgagattaaatacacaagga----------------------------------tatacagctaatggtgagaaaatt-----ctaagccttttcaaatctcagttcagtattctatttactAAA--TGATATTAGTCCTAAAAGCCTTATA----TTTTTTTCAAATCTAATTGCTAAATATCTTCCATAACCTTCTTTTCTGAAATGTGTTGAAAGAACATTAGTG-----ATAACTGCATCCAAAAGAATGTAAGGTGGTATGATGAGCACTGAAATTTTACAGTCAGCAAATG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81012212 531 - 96509753 TGAATTTTAATATCACACTTTAGGAGAA-TT-TTGGCTGTATTTCAACTGGTCCTCACAG--TCATATATTTTATGACTTAGGTTAAATTAATACATTGTAAATTAATAGTTGGATTACTATTAAG-TTATATGAAAACTAAGACCT-AGGTTTTTGATATTAGCATTATGA----CTATAT---CTACACACC-CACATACAAA-tatacgtactagtttg--tcttcttaaatataaccatgaa------gtaaaaagaataga-catgttggtttcatgttgaaggtaaagaaactgagtcaaactgagattaaatacacaagga----------------------------------tatacagctaatGGTGAGAAAATT-----CTAAGCCTTTTCAAATCTCAGTTCAGTATTCTATTTACTAAA--TGATATTAGTCCTAAAAGCCTTATA----TTTTTTTCAAATCTAATTGCTAAATATCTTCCATAACCTTCTTTTCTGAAATGTGTTGAAAGAACATTAGTG-----ATAACTGCATCCAAAAGAATGGAAGGTGGTATGATGAGCACTGGAATTTTACAGTCAGCAAATG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76269293 531 + 90941950 TGAATTTTAATATCACACTTTAGAAGAA-TT-TTGGCTGTATTTCAACTGGTCCTCACAG--TCATATATTTTATGACTTAGGTTAAATTAATACATTGTAAATTAATAGTTGGATTACTATTAAG-TTATATGAAAACTAAGACCT-AGGTTTTTGATATTAGCATTATGA----CTATAT---CTACACACc-cacatacaaa-tatatgtacTAGTTTG--TCTTCTTAAATATAACCATGAA------GTAAAAAGAATAGA-CATGTTGGTTTCATGTTGAaggtaaagaaactgagtcaAACTAAGATTAAATACACAAGGA----------------------------------TATACAGCTAATGGTGAGAAAATT-----CTAAGCCTTTTCAAATCTCAGTTCAGTATTCTATTTACTAAA--TGATATTAGTCCTAAAAGccttata----tttttttcaaatctaaTTGCTAAATATCTTCCATAACCTTCTTTTCTGAAATGTGTTGAAAGAACATTAGTG-----ATAACTGCATCCAAAAGAATGGAAGGTGGTATGATGAGCACTGAAATTTTACAGTCAGCAAATG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18539107 534 + 33263144 TGAATTTTAATATCACACTTTAGAAGCA-TT-TTGGCTGTATTTCAACTGGTCCTCACAG--TCATATATTTTATGACttagattaaattaatacattgtaaattaatagttggattactattaag-ttatatgaaaACTAAGACCT-AGGTTTTTGATATTAGCATTATGA----CTATAT---CTACACACC-CACATACAAA-TATACATACTAGTTTG--TCTTCTTAAATATAACCATGAA------GTAAAAAGAATAGA-CATGTTGGTTTcatgttgaaggtaaagaaactgagtcaaactgagattaaatacacaagga----------------------------------tatacagctaatGGTGAGAAAATT-----CTAAGCCTTTTCAAATCTCAGTTCAGTATTCTATTTACTAAA--TGATATTAGTCCTAAAAGCCTTCTA-TTTTTTTTTTCAAATCTAATTGCTAAATATCTTCCATAACCTTCTTTTCTGAAATGTGTTCAAAGAACATTAGTG-----ATAACTGCATCCAAAAGAATGGAAGGTGGTATGATGAGCACCGAAATTTTACAGTCAGCAAATG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198242412 542 + 210400635 TGAGTTTTAATATCATACTTTAAAAGCATTT-TTGGCTGTATTCCAACTGATCCTCACAG--TCATACATTTTATGACTTAGGTTAAATTAATACATTGTAAATTAATAGTTGGATTACTATTAAG-TTATATGAAAACCAAGATCT-AGGTTTTTGATAGCAGCATTATGA----CTGTAT---CTACACACC-CACACACAAa-tatacatacttgtttgtatcttcttaaatacaaccatgaa------gtaaaaagaataga-tatgttggcttcattttgaaggtaaagaaactaagccaaaccaagattaagtactcaagga----------------------------------tatacacataatggtgagaaaagt-----ctaagccttttcaaatctcagttcagtattctatgtactaaa--ctgtactAGTCCGAAAATCCTTCAT-TTTTTTTTTCCAAATCTAATTGCTAAGTATCTTCTATAACTTTCTTTTCTCGAACGTGTTGAAAGAACATTAGGGACACAAATACTGCATCCAAAAGAATGGAAGGTGGTATGATGAGCATTGAAATTTTAGAGTAAGCAAATG i calJac3.chr1 C 0 C 0 s mm10.chr15 77107866 522 + 104043685 CGAGCTTCTATGTCA-ACCTAAGAAGAA-TTATAAACTACATCCCAACTGCTTCTCAGAG--TCACAACTCTTACGTCTTTGGTTAAGCCACTAAATTGTAAACTG-----------ACTCTAAAGTTTATGTGAAAATGCACACTT-GGTTCTT--------ACACTGTGACGGCCTATATGTGCTGTTTACC-GACACCCAAACTGTACACAC------A--CCCT----AGTACAACCATGGGGACAGTGCAGCAAGGACAGA-TGGAGTAGATTCATTCTAAAGGGAAAGAGATGATTTCAAACGAGAGGGAAATGCCCTCTGA----------------------------------CATTCAGTGACTGGTAAGGAAATCA-AAACTCAAACTTTGCCAGTCTGTGTGTGGC-CTCTATTTACTAAG--TGACATTATTCTGCAAGTCCTCACT----TGCTTTCCAAATCCAACTGAGAAATGGCTCTGAT-ATCTTCTCTTCCGGGATGTGTGAAGGAGACACCAGCAACACAGTGACTATGT-CAAAAGAACAGAC-ATGGTATCATAGGCACTGACAATTCTTGATCTGCAAATG i mm10.chr15 I 176 C 0 s canFam3.chr10 40866985 565 - 69331447 TGAGTTTTTATATCACACTGTAGAGGTA-TTATAAACTGAATTCCAACAGATTCTCACTACCTCATACATTATATGCCTTGGGTTAAATTAACAAATGAT--GTCAGTGGCTGGATAAC----AGA-TTATGTGGAAACTAAGGCCTGAGGTTTTTAGTACTAGCATTTTGACTGACTGAAT---CTGTATATC-CTCACACTCA-CACAC--------TTG--TCTT-TTAAATacaaccatgaa------gtagaaaggataaatcttgttgttttcatttttaagatgaagaaagtgagtcaaactgaggtgaaACAC-CAAGAACCAACAAAGCATTTTTCCTTCCAGGTGGCTTCTTTCCACAGCTAATGGTGAGAAAATTAGAAATTAAGC--TTTGAAACCTAAGTTCGGTATTCTATT-----AA--CTGCATTAGTCCCCAAATCCTTCTAGTTTTCTTTTTCAAACCTAATTGCTAAATGTGTTCTGTGAGCTTCTGCTCTGTAATGTGCTGACAGAGCATCTGTGACGTAGTAACTGCATGCAAAAGAATGCAGGGTAGTGTCATAAGCATTGACATTTCATAGCCAGCAGATG i canFam3.chr10 C 0 C 0 a score=248460.000000 s hg38.chr22_KI270876v1_alt 91778 78 + 263666 TCAAAGTTTAACATTCA-TGTCTGC-TTGGATAAGATTTTCTCAATAATGAC--TAACATTCTGGAACAAAATTTCACTTTC s panTro4.chr22 34469359 78 + 49737984 TCAAAGTTTAACATTCA-TGTCTGC-TTGGATAAGATTTTCTCAATAATGAC--TAACATTCTGGAACAAAATTTCACTTTC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30885734 78 + 46535552 ACAAAGTTTAACATTCA-TGTCTGC-TTGGATAAGATTTTCTCAATAATGAC--TAACATTCTGGAACAAAATTTCACTTTC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100438324 78 - 115148730 ACAAAGTTTCACATTAA-TATCTGC-TTGGATAAGATTTTCTCAATAATGAC--TAACATTCTGGAACAAAATTTCACTTTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80585929 80 + 95678458 ACAAAGTTTAACATTAA-TGTCTGC-TTGGATAAGATTTTCTCAATAATGACTTTAACATTCTGGAACAAAATTTCACTTTC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81012743 80 - 96509753 ACAAAGTTTAACATTAA-TGTCTGC-TTGGATAAGATTTTCTCAATAATGACTTTAACATTCTGGAACAAAATTTCACTTTC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76269824 80 + 90941950 ACAAAGTTTAACATTAA-TGTCTGC-TTGGATAAGATTTTCTCAATAATGACTTTAACATTCTGGAACAAAATTTcactttc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18539641 80 + 33263144 ACAAAGTTTAACATTAA-TGTCTGC-TTGGATAAGATTTTCTCAATAATGACTTTAACATTCTGGAACAAAATTTCACTTTC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198242954 80 + 210400635 ACAACGTTTAACATTAA-TGTCTGC-TTGTACAGGATTTTCTCAATAATGACTTTAACATTCTGGAACAAAATTGCACTTCC i calJac3.chr1 C 0 I 151 s mm10.chr15 77108388 71 + 104043685 ACAAAGTTTAATGTTTAGTATCTATGTTAGA------TTTCCCAATAGTGAC-----TAGTTGAGGGAAAACCTGCGTTTTC i mm10.chr15 C 0 C 0 e canFam3.chr10 40867550 0 - 69331447 C a score=105904.000000 s hg38.chr22_KI270876v1_alt 91856 31 + 263666 AAATGTTT---TAAAAGTGTTTTATAAAGAAAGA s panTro4.chr22 34469437 31 + 49737984 AAATGTTT---TAAAAGTGTTTTATAAAGAAAGA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30885812 31 + 46535552 AAATGTTT---TAAAAGTGTTTTATAAAGAAAGA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100438402 31 - 115148730 AAATGTTG---TAAAAGTGTTTTATAAAGAAAGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80586009 31 + 95678458 AAATGTTT---TAAAAGTGTTTCATAAAGAAAGA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81012823 31 - 96509753 AAATGTTT---TAAAAGTGTTTCATAAAGAAAGA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76269904 31 + 90941950 aaatgttt---taaaagtgttttataaagaaaga i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18539721 31 + 33263144 AAATGTTT---TAAAAGTGTTTTATAAAGAAAGA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198243185 31 + 210400635 AAATGTTT---TAAAAGTGTTTTATAAAGAAAGG i calJac3.chr1 I 151 C 0 s mm10.chr15 77108459 34 + 104043685 GACTGTCTGTATTAAAGTGTTTTATATTCTAAGA i mm10.chr15 C 0 C 0 e canFam3.chr10 40867550 0 - 69331447 C a score=1940701.000000 s hg38.chr22_KI270876v1_alt 91887 522 + 263666 TGCTTATACACCAAAGGAAATGCGAATCAAGATACCAAAAACATAAAAAT--AAAGCAATCTTTATAAGCATCTTTT-CCCTGGGGTGATAGGAGGAAGAAAGCCTTGTTGATGTTTTGGGACTCTTTAATATGAAACATAAAGGTAAG-AAGATTTCTTTCTTTGCTTTGAAGATAAACAGACTTtgcaataggccaaataatgg----cttcccaaagttgtccacatcctaatccccagagccagtgaata-tgttaccttacacggcaaaagggattttgcagatgcgattaagttaa-tgatcttgagat--agagagattatcctggattatccagttgggcccaatgtaat-acagtgttccaacgtggccactgtac-tgtgcttataagtgaaaag----cggacacaggagagtccgaatcagagta-aagcagcctgagaaagacttgactggccattgctggc-tctgaagacagaagggagctatagtccaagaaatgtgggcagcctctagaagat--agaaaaggggag s panTro4.chr22 34469468 524 + 49737984 TGCTTATACACCAAAGGAAATGCGAATCAAGATACCAAAAACATAAAAAT--AAAGCCATCTTTATAAGCATCTTTT-CCCTGGGGTGATAGGAGGAAGAAAGCCTTGTTGATGTTTTGGGACTCTTTAATATGAAACATAAAGGTAAG-AAGATTTCTTTCTTTGCTTTGAAGATAAACAGACTTtgcaataggccaaacaatgg----cttcccaaagttgtccacatcctaatccccagagccagtgaata-tgttaccttacacggcaaaagggattttgcagatgcgattaagttaa-tgatcttgagat--agagagattatcctggattatccagttgggcccaatgtaat-acagtgttccaacgtggccactgtac-tgtgcttataagtgaaaag----cggacacaggagagtccgaatcagagta-aagcggcctgagaaagacttgactggccattgctggc-tctgaagacagaagggagctacagtccaagaaatgtgggcagcctctagaagataaaaaaaaggggag i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30885843 525 + 46535552 TGCTTATACACCAAAGGAAATGTGAATCAAGATACCAAAAACATAAAAATAAAAAGCAATCTTTATAAGCATCTTTTCCCCCGGGGTGATAGGAGGAAGAAGGCCTTGTTGATGCTTTGGGACTCTTTAATATGAAACATAAAGGTAAG-AGGATTTCTTTCTTTGCTTTGAAGATAAACAGACCTtgcaataggccaaataatgg----cttcccaaagttgtccacatcctaatccccagagccagtgaata-tgttaccttacacggcaaaagggattttgcagatgcgattaagttaa-tgatcttgagat--agagagattatcctggattatccagttgggcccagtgtaat-acagtggcccaacatggccaccgtac-tgtgcttataagtgaaaag----cggacacaggagagtccgaatcagagta-aagcagcctgagaaagacttgactggccattgctggc-tctgaagacagaagggagctatagtccaagaaatgtgggcagcctctagaagtt--agaaaaggtgag i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100438433 519 - 115148730 TGCTTATACACCAGAGGATATGCGAATCAAGATACCAAAAATATAAAAAT--GAAGCAATCTTTATAAGCATCTTTT-CCCTGGGGTGATAGGAGGAAGAAGGCCTTGTTGATGCTTTGGGACTCTTTAATATGAAACATAAAGGTAAG-AGGATTTCTTTCTTTGCTTTGAAGATAA----ACCTtgcaataggccaaatgatgg----cttcccaaagttgtccacatcctaatccccaaagccagtgaata-tgttaccttacacggcaaaagcgattttgcagatgcgattaagttaa-tgatcttgagat--agagagattatcctggattacccagttgggcccaatgtaat-acagtggcccaacgtggccactgtacgtgtgcttgtaagtgaaaag----cggacacaggagagtccgaatcagagta-aagcagcctgagaaagacttgactggccattgctggc-tctgaagacagaaaggagctctagtccaagaaatctaggcagcctctataagtt--agaaaagctgag i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80586040 522 + 95678458 TGCTTATACACCAAAGGAAATGCGAATCAAGATGCCAAAAATATAAAAAT--AAAGCAATCTTTATAAGCATCTTTT-CCCTGGGGTGATAGGAGGAAGAAGGCCTTGTTGATGCGCTGGGACTCCTTAGTATGAAACATAAAGGTAAG-AGGATTTCTTTATTTGCTTTGAAGACAAACAGACCTtgcaatagggcaaacaatgg----cttcctaaagttgtccacatcctaatccccagagccagtgaata-tgttaccttacacagcaaaagggattttgcagatgcgattaagttaa-tgatcttgagat--agagagattatcctggattatccggttgggcccaatataat-acagtggcccaatgtggccactgtac-tgtgcttataagtgaaaag----cggacacaggagagtccgaatcagagta-aagcagcctgagaaagacttgactggccattgctggc-tctgaagacagaagggagctatagtccaagaaatgtgggcagcctctagaagtt--agaaaaggtgag i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81012854 522 - 96509753 TGCTTATACACCAAAGGAAATGCGAATCAAGATGCCAAAAATATAAAAAT--AAAGCAATCTTTATAAGCATCTTTT-CCCTGGGGTGATAGGAGGAAGAAGGCCTTGTTGATGCGCTGGGACTCCTTAGTATGAAACATAAAGGTAAG-AGGATTTCTTTATTTGCTTTGAAGACAAACAGACCTtgcaatagggcaaacaatgg----cttcctaaagttgtccacatcctaatccccagagccagtgaata-tgttaccttacacggcaaaagggattttgcagatgcgattaagttaa-tgatcttgagat--agagagattatcctggattatccggttgggcccaatataat-acagtggcccaatgtggccactgtac-tgtgcttataagtgaaaag----cggacacaggagagtccgaatcagagta-aagcagcctgagaaagacttgactggccattgctggc-tctgaagacagaagggagctatagtccaagaaatgtgggcagcctctagaagtt--agaaaaggtgag i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76269935 522 + 90941950 tgCTTATACACCAAAGGAAATGCGAATCAAGatgccaaaaatataaaaat--aaagcaatcttTATAAGCATCTTTT-CCCTGGGGTGATAGGAGGAAGAAGGCCTTGTTGATGCGCTGGGACTCCTTAGTATGAAACATAAAGGTAAG-AGgatttctttatttgctttgaaGATAAACAGACCTTGCAATAGGGCAAATAATGG----CTTCCTAAAgttgtccacatcctaatccccagagccagtgaata-tgttaccttacacggcaaaagggattttgcagatgcgATTAAGTTAA-TGATCTTGAGat--agagagattatcctggattatccggTTGGGCCCAATATAAT-ACAGTGGCCCAATGTGGCCACTGAAC-TGTGCTTGTAAGTGAAAAG----CGGACACAGGAGAGTCCGAATCAGAGTA-AAGCAGCCTGAGAAAGACTTGACTGGCCATTGCTGGC-TCTGAAGACAGAAGGGAGCTATAGTCCAAgaaatgtgggcagcctctagaagtt--AGAAAAGGTGAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18539752 501 + 33263144 TGCTTA---------------------CAAGATACCAAAAATATAAAAAT--AAAGCACTCTTTATAAGCATCTTTT-CTCTGGGGTGATAGGAGGAAGAAGGCCTTGTTGATGCGCTGGGACTCCTTAGTATGAAACATAAAGGTAAG-AGGATTTCTTTATTTGCTTTGAAGATAAACAGACCTtgcaatagggcaaataatgg----cttcctaaagttgtccacatcctaatccccagagccagtgaata-tgttaccttacacggcaaaagggattttgtagatgcgattaagttaa-tgatcttgagat--agagagattatcctggattatctggttgggcccaatgtaat-acagtggcccaatgtggccactgtac-tgtgcttgtaagtgaaaag----cggacacaggagagtccgaatcagagta-aagcagcctgagaaagacttgactggccattgctggc-tctgaagacagaagagagctatagtccaagaaatgtgggcagcctctagaagtt--agaaaaggtgag i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198243216 525 + 210400635 TGCTTATACACCAAAGGAAACGATAATAAAGATACCAAAAATATAAAAAT--AAAGCAATCTTCATAAGCATTTTTTTCCCTGGGGTGATAGGAGGAAGAAGGCCTTGTTGATGCTTTGGGACTCTTTAATATGAAACATAAAGGTAAG-AAGATTTCTTTCTTTGCTTTGAAGATAAACAGACCTTGCAACaggcggaataatgg----cttccgaaagttgtccacgtcctaatccccagagccagtgaata-tgctaccttacatggcaaaagggattttgcagatgtgattaagttaa-tgatcttgagatagagagagattatcctggattatccagttggggccaatgtaat-acagtggcccaatgtggccactgtac-tgtgcttataagtgaaaag----cagacaaaggagagacagaatcagagta-aagcagcctgacaaagccttgactggccactgctagc-tctgaagacacaagagagctatagtccaagaaatgtgggcagcctctagaagtt--agaaaaggtaag i calJac3.chr1 C 0 C 0 s mm10.chr15 77108493 473 + 104043685 TGATCAGATGCTAAAGGAAGTGCTAATCAAGATACCACAGACATCAAAAC--AAACCAGTGTTTCCAA-CAAGTCTT-CCCT--GGTGCAAGGAGGAAGAGGGCCTGTGTGATG-GTTGGGACTCTCTAATAGGAAAC--AGAGGTAAG-A------TTTCATTTTTTTTGAAGAAAATCAGACCCCGT-gtaggcagagtaatgttcaccacccccaaattcctcacatcttaatccctgaagctgcagacta-tgttatcttgcaaggcaaaagggattttgtagatacgattagatgaagtgatttcaaggt--agggagacgagcgtgg------CAGTCCAGGC------------------------------CCTCAC-AGTATTTATAAAGTAAAGGAACACAAGCATGCGGGACCCCAGAATCCAGTACCAGCAGCTT-CTAAAGGCCAGGTTGCTCAC-ACTGGC-CCTGAAAACAG-AGGGGGCTGTAGCA--------GCGGGCATCCTCCGGAGGCC--CAGAAGGGCGAG i mm10.chr15 C 0 I 152 s canFam3.chr10 40867550 487 - 69331447 TGCTTATATTCTAAAGGAAATGCTAATCAAGACACCAAAGATAC-AAAAT--GAAGCAGTCTTCACAGACAACTTT--ACCTAGGGTGA----AGGAGGAAGGTCTTGCTGATACTTTGGGACTTCCTGCTATGAAAC--AGAGGTAAGCAGGATTTCCTTCTTTCCTTTGAAGATAAACAGACTTGgtggcaggcagaataaggg----ccccccaaagttgtccacatcctaatccttggaacctgtgaatgttactaccttacctggtaaaagggattttgcagatgtgcttaaattaa-tgatcttgcgat--agggagattatcctggattatccaggtgagcccaatgtaatcacaga----------------------ggtgcttataagttaaaga----gggaaacaggagagtctgaatcagaatg-cagtagcctgagaaagacaggactggccattttgggcttttgaagatggaagg----------tcaaggaatgtgggccacctctagaaggt--ggaaaagacaag i canFam3.chr10 C 0 C 0 a score=854424.000000 s hg38.chr22_KI270876v1_alt 92409 251 + 263666 aaaacagatgatcccttagagcctcctgaa-gaaccc--------aacacgttgattttagccttgtgagagccattttggacttctgacctccagagctgtaagataataaatgtgtg---gttttaagccacccgacttgtggtaatctgttcagaagtcatagggaattaatacaTACCTCTTAGAATTAAAGTCCATGATTAGGAAAGTGAGAGGTATGACTAGAA-TTTTTGAAGTACTGTTCTTAAATACTTTTCTCT s panTro4.chr22 34469992 249 + 49737984 aaaacagatgatcccttagagcctcctgaa-gaaccc--------aacacgttgattttagccttgtgagagcc--tttggacttctgacctccagagctgtaagataataaatgtgtg---gttttaagccacccgacttgtggtaatctgttcagaagtcatagggaattaatacaTACCCCTTAGAATTAAAGTCCGTGATTAGGAAAGTGAGAGGTATGACTAGAA-TTTTTGAAGTACTGTTCTTAAATACTTTTCTCT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30886368 252 + 46535552 aaaacagatgatcccttagagcctcctgaa-gaaccc--------aacacgttgattttagccttgtgagagccattttggacttctgacctccagagctgtaagataataaatgtgtg---gttttaagccacccgatttgtggtaatctgttcagaagtcatagggaattaataTGTACCTCTTAGAATTAAAGTCCATGATTAGGAAAGTGAGAGGTATGACTAGAATTTTTTGAAGTACTGTTCTTAAATACTTTTCTCT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100438952 251 - 115148730 aaaacagatgaacccttagagcct-ctgaa-gaaccc--------aacacgttgattttagccttgtgagacccattttggatttctgacctccagagctgtaagataataaatgtgtg---gtttcaagccacccaatttgtggcaatctgttcagaagtcatagggaattaatacaTACCTCTTAGAATTAAAGTCCATGATTAGGAAGGTGAGAGGTATGACTAGAATTTTTTGAAGTACTGTTCTTAAATACTTTTCTCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80586562 251 + 95678458 aaaacagatgatcccttagagcctcctcaa-gaaccc--------aacacactgattttagccttgtgagaccca-tttggacttctgacctccagggctgtaagataataaatgtgtg---gttttaagccacccaatttgtggtaatctgttcagaagtcatagggaattaatacaTACCTCTTAGAATTAAAGTCCATGATTAGGAAGGTGAGAGGTATTAGTAGAATTTTTTGAAGTTCTGTTCTTAAATACTTTTCTCT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81013376 252 - 96509753 aaaacagatgatcccttagagcctcctcaa-gaaccc--------aacacactgattttagccttgtgagacccattttggacttctgacctccagggctgtaagataataaatgtgtg---gttttaagccacccaatttgtggtaatctgttcagaagtcatagggaattaatacaTACCTCTTAGAATTAAAGTCCATGATTAGGAAGGTGAGAGGTATTAGTAGAATTTTTTGAAGTTCTGTTCTTAAATACTTTTCTCT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76270457 252 + 90941950 AAAACAGATGATCCCTTAGAGCCTCCTCAA-GAACCC--------AACACACTGATTTTAGCCTTGtgagacccattttggacttctgacctccagggctgtaagataataaatgtgtg---gtTTTAAGCCACACAATTTGTGGTAATCTGTTCAGAAGTCATAGGGAATTAATACATATCTCTTAGAATTAAAGTCCATGATTAGGAAGGTGAGAGGTATTAGTAGAATTTTTTGAAGTTCTGTTCTTAAATACTTTTCTCT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18540253 252 + 33263144 gaaacagatgatcccttagagcctcctcaa-gaaccc--------aacacattgattttagccttgtcagacccattttggacttctgacctccagggctgtaagataataaatgtgtg---gttttaagccacccaatttgtggtaatctgttcagaagtcatagggaattaatacaCACCTCTTAGAATTAAAGTCCATGATTAGGAAGGTGAGAGGTATGACTAGAATTTTTTGAAGTACTGTTCTTAAATACTTTTCTCT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198243741 251 + 210400635 aaaacagatgatcccttagagcctcctgaaggaacat--------aacaccttgatttcagccttctgagactcattttggacttcggacctccagaactgcaagataatacatgtgtg---gctttcagccacccaatctgtggtcatttgttcagaagtcacagggaattaatacaTACTTC--AGAATTAAAGTCCATGATTAGGAAGATGAGAGGTATGACTAAAATTTTTTTAAGTACTGTTCTTAAATACTTTTCTCT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40868037 259 - 69331447 -gagtggattatcccttagagccatctgaaagaatgcagccctgaaacactttgattttagtttagtgagacccattttggacttctgaccttcagaactatatgataataaatctctgtgtttttttagccacctactttatgatggtttgttcagaggcaataggaaattaacacaTACCTCTCTCA---GAAGTCTGTGATTAGAAAGTTGAGAAGTGCAGCCAGCA-TTTTTAGAGTCCTGTTCTTTGAAACTTTCCTCT i canFam3.chr10 C 0 C 0 e mm10.chr15 77108966 152 + 104043685 I a score=247955.000000 s hg38.chr22_KI270876v1_alt 92660 81 + 263666 CATGTTTAAACTTTAAACAGGTGATTTTCCATCAAC--CCAAAC---ATGCTTCCTTATCTATCACATTCACAATTTAGTTTCAGT s panTro4.chr22 34470241 81 + 49737984 CATGTTTAAACTTTAAACAGGTGATTTTCCATCAAC--CCAAAC---ATGCTTCCTTATCTATCACATTCACAATTTAGTTTCAGT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30886620 81 + 46535552 CATGTTTAAATTTTAAACAGGTGATTTTCCATCAAC--TCAAAC---ATGCTTCCTTATCTATCACATTCACAATTTAGTTTCAAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100439203 81 - 115148730 CATGTTTAAACTTTAAACAGGTGATTTTCCATCAAC--CCAAAC---ATGCTTCCTTATCTATCACATTCACAATTTAGTTTCAGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80586813 81 + 95678458 CATGTTTAAACTTTAAACAGGTGATTTTCCATCAAC--CCAAAC---ATGCTTCCTTATCTATCACACTCACAATTTAGTTTCAAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81013628 81 - 96509753 CATGTTTAAACTTTAAACAGGTGATTTTCCATCAAC--CCAAAC---ATGCTTCCTTATCTATCACACTCACAATTTAGTTTCAAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76270709 81 + 90941950 CATGTTTAAACTTTAAACAGGTGATTTTCCATCAAC--CCAAAC---ATGCTTCCTTATCTATCACACTCACAATTTAGTTTCAAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18540505 81 + 33263144 CAAGTTTAAACTTTGAACAGGTGATTTTCCATCAAC--CCAAAC---ATGCTTCCTTATCTATCACACTCACAATTTAGTTTCAAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198243992 80 + 210400635 CACGTTTTAACTTTAAACAGGTGATTTTTCATCAAC--CCAGACTTTGTACTTCCT----TATCACATTCACAATTTAGTTTCAAT i calJac3.chr1 C 0 I 317 s mm10.chr15 77109118 42 + 104043685 CATGTCTAAATTCAACAC-----ATTTTACCTGAGCAGTTAAAA---ATG------------------------------------ i mm10.chr15 I 152 C 0 s canFam3.chr10 40868296 51 - 69331447 CCTGTTGAACCTTTA-------GATTTTCCATCAAC--TTAACT--------------------------ACAATTTGGTTTCAAG i canFam3.chr10 C 0 C 0 a score=93560.000000 s hg38.chr22_KI270876v1_alt 92741 25 + 263666 AACATGAACTCAGAT----CTTAAAATAT s panTro4.chr22 34470322 25 + 49737984 AACATGAACTCAGAT----CTTAAAACAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30886701 25 + 46535552 AACATGAACTCAGAT----CTTAAAACAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100439284 25 - 115148730 AACATGAACTCAGAT----CTTAAAACAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80586894 25 + 95678458 AACATGAACTCAGAT----CTTAAAACAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81013709 25 - 96509753 AACATGAACTCAGAT----CTTAAAACAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76270790 25 + 90941950 AACATGAACTCagat----cttaaaacat i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18540586 25 + 33263144 AACATGAACTCAGAT----CTTAAAACAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198244389 25 + 210400635 AACATGAACTCAAAT----TTTAAAACAT i calJac3.chr1 I 317 C 0 s mm10.chr15 77109160 24 + 104043685 ACCATAAAGTTA-AT----TTTGAAATAT i mm10.chr15 C 0 I 224 s canFam3.chr10 40868347 29 - 69331447 AATATTAACTCAAATAAAGCTCGAAAAAA i canFam3.chr10 C 0 C 0 a score=1068353.000000 s hg38.chr22_KI270876v1_alt 92766 337 + 263666 ---TTTTAGAATATACTATTTCTTCAATAAAATTTAGCATTTTAGAAAAGGTGCCAGAAACAGTGCTAAAGATGTTCACAGATTATCCAGGTTT-AAAAGTTATCAGTAGAAAAGTCTGCTTACATGAACTCATGTTTTGTCACTTCACTCTTAGAAATTGAATTGACATTAAG-TTGGTCATTCTGATCTCTTGCTTTGG--AAAAAAAAGTCAGTAAAATTATGTCTAAATCTAAAGTATTTTCCT----------------------TAGAACAGCTTCCAAATGATCATACAACCTATCAAACACTGAACCAGTCTACACCGGTATAATATATGTAACAAATAGATTATATAATCTGTAACA s panTro4.chr22 34470347 336 + 49737984 ---TTTTAGAATATACTATTTCTTCAATAAAATTTAGCATTTTAGAAAAGGTGCCAGAAACTGTGCTAAAGATGTTC-CAGATTATCCAGGTTT-AAAAGTTATCAGTAGAAAAGTCTGCTTACATGAACTCATGTTTTGTCATTTCACTCTTAGAAATCGAATTGACATTAAG-TTGGTCATTCTGATCTCTTGCTTTGG--AAAAAAAAGTTAGTAAAATTATGTCTAAATCTAAAGTATTTTCCT----------------------TAGAACAGCTTCCAAATGATCATACAACCTATCAAACACTGAACCAGTCTACACCGGTATAATATATGTAACAAATAGATTATATAATCTGTAACA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30886726 358 + 46535552 ---TTTTAGAATATACTATTTCTTCAATAAAATTTAGCATTTTAGAAAAGGTGCCAGAAACTGTGCTAAAGATGTTCACAGATTATCCAGGTTT-AAAAGTTATCAGTAGAAAAGTCTGCTTACATGAACTCATGTTTTGTCACTTCACTCTTAGAAATCGAATTGACATTAAG-TTGGTCATTCTGATCTCTTGCTTTGG--AAAAAAAAGTTAGTAAAATTATGTCTAAATCCAAAATATTTTCCTTAGAACAGCTTCCAAATGATCATAGAACAGCTTCCAAATGATCATACAACCCATC-AACACTGAACCAGTCTACACAGGTATAATATATGTAACAAATGGATTATATAATCTGTAACA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100439309 359 - 115148730 ---TTTTAGAATACACTATTTCTTCAATAAAATTTAGCATTTTAGAAAAGGTGCCAGAAACTGTGCTAAAGATGTTCACAGATTATCCAGGTTT-AAAAGTTATCAGTAGAAAAGTCTGCTTACATGAACTCATGTTTTGTCACTTCACTCTTAGAAATTGAATTGACATTAAG-TTGGTCATTCTGATCTCTTGCTTTGG--AAAAAAAAGTTAGTAAAATTATGTCTAAATCTAAAATATTTTCCTTAGAACAGCTTCCAAATGATCATAGAACAGCTTCCAAATGATCATACAACCTATCAAACACTGAACCAGTCTACGCAGGTATAATATATATAACAAATAGATTATATAATCTGTAACA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80586919 353 + 95678458 ---TTTTAGAATACACTATTTCTTCAATAAAATTTAGCATTTTAGAAAAGGTGCCAGAAACTGTGCTAAAGATGTTCACAGATTATCCAGGTTT-AAAAGTCATCAGTAGAAAAGCCTGCTTACATGAACTCATGTTTTGTCACTTTGCTCTTAGAAACCGA------ATTAAG-TTGGTCATTCTGATCTCTTGCTTTGG-AAAAAAAAAGTTAGTAAAATTATGTCTAAATCT-AAATATTTTCCTTAGAACAACTTCCAAATGATCGTAGAACAGCTTCTAAATGATCATACAACCTATCAAACACTGAACCAGTCTACACAGGTATAATATATATAACAAATAGATTACATAATCTGTAACA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81013734 354 - 96509753 ---TTTTAGAATACACTATTTCTTCAATAAAATTTAGCATTTTAGAAAAGGTGCCAGAAACTGTGCTAAAGATGTTCACAGATTATCCAGGTTT-AAAAGTCATCAGTAGAAAAGCCTGCTTACAAGAACTCATGTTTTGTCACTTTGCTCTTAGAAACCGA------ATTAAG-TTGGTCATTCTGATCTCTTGCTTTGGAAAAAAAAAAGTTAGTAAAATTATGTCTAAATCT-AAATATTTTCCTTAGAACAACTTCCAAATGATCGTAGAACAGCTTCTAAATGATCATACAACCTATCAAACACTGAACCAGTCTACACAGGTATAATATATATAACAAATAGATTACATAATCTGTAACA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76270815 354 + 90941950 ---ttttagaatacactatttcttcaataaaatttagcattttagAAAAGGTGCCAGAAACTGTGCTAAAGATGTTCACAGATTATCCAGGTTT-AAAAGTCATCAGTAGAAAAGCCTGCTTACATGAACTCATGTTTTGTCACTTTGCTCTTAGAAACCGA------ATTAAG-TTGGTCATTCTGATCTcttgctttggaaaaaaaaaagttagtaaaATTATGTCtaaatct-aaatattttcctTAGAACAACTTCCACATGATCGTAGAAGAGCTTCTAAATGATCATACAACCTATCAAACACTGAACCAGTCTACAcaggtataatatatataacaaatagaTTACATAATCTATAACA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18540611 332 + 33263144 ---TTTTAGAATACACCATTTCTTCAATAAAATTCAGCATTTTAGAAAAGGTGCCAGAAACTGTGCTAAAGATGTTCACAAATTATCCAGGTTT-AAAAGTCATCAGTAGAAAAGCCTGCTTACATGAACTCATGTTTTGTCACTTTGCTCTTAGAAACCGA------ATTAAG-TTGGTCATTCTGATCTCTTGCTTTGG-GAAAAAAACGTTAGTAAAATTGTGTCTAAATCTAAAATATTTTCCTTAGAACAACTTCC----------------------AAATGATCATACAACCTATCAAACACTGAACCAGTCTACACAGGTATAATATATATAACAAATAGATTACATAATCTATAACA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198244414 323 + 210400635 ---TTTTAGAATATACTATTTCTT-ATTAAAATTTAGCATATTAGAAAAGGTACCAGAAAC--TGCTAAAGATGTTCACAGATTATCCAGGTTT-AAAAGTTACCAGCAGAAAAGTTTGTTTACATGAACTCATATTTTGTCACTTCACTCTTAGAACTCTAATTGACATTAAG-TTGGTCATTCTGATCTCTTGCTTTGG--AAAAACAAGTTAGTAAAATTATGTAT-AATCTAAAATATTTTCCT----------------------TAGAACAGCTTCCAAATGATCATACAACCTATCAAACACT------GTCTACACGGTTATAACATATATAGCAAATAGACTATATAATCTAC---- i calJac3.chr1 C 0 C 0 s canFam3.chr10 40868376 315 - 69331447 AAGTTT---GATGTACCATTTCTTCAATAAAATTTAGCACTTCA-AAAATGTGCCAGGAATTGAGCTAAGGATATTCACAGATTATCGAGGCTTGAAAAGTTAT-AACAGGAAAATATGCTTACATGAAATTATGTTTTAATG-TCCTTTCTTGGAAATCTAATTCACATTAAGTTTGGTCATTTAGGTCTCTTGCTTTG---aaaaaaaatttaataaaattatGTCTAAACCTAACACTTTATCCT----------------------TAGAAGAGCTTCAAAATGTTTATATAATGTATCAGTCATGAAAACAAAATAACCAGTTAGAAGA--------------GCTACAAAGTCA------ i canFam3.chr10 C 0 C 0 e mm10.chr15 77109184 224 + 104043685 I a score=2734566.000000 s hg38.chr22_KI270876v1_alt 93103 777 + 263666 AAC--AGATTTAATCTCAAATTCTGAACAAGAGGAAATATTTCAGCTATGTAAACAGATGGAGAATTTTTGTTATCTAAACTTCTATTCATAAAATCAGATTTTAAAAAAGTAAACTTTAATTTTTA--ATTAAAAAATGATTTTGACATGTTTGTCTAC-------ACTagcactgcagacagaaatataatacaaaccacatatataatttaaaattttctaataaccacatttaaaaagtagaaacaggtgagattaattttaacaatgtattttatttaacccaatataaacacatattattaacatttcaatatggtattaatattaaaacattattagtg--agatgcttaacattctttttttgtgctaa--ttctgaaatctggtgtcca-ttttacccttacag-gcacacctccgtttaaact-ctccaaatttcaagtgctaaatgtgaccactgtgctgggcaatgcagGTCTCTACACTTTATACTCC--TCTA-A--GTTTGCAGTCCTCAGAGCCCTTCTATATTAAACATTTAAACACACCAGTGTTACATTAGTGATTTACCAGGTATCTTAGCTG-ACTTCTGGAAATTGAAGAATGGTGTATT-TATTAGGTGTATGGTTGTAGTTAAAACTTCTACAAAGTGTGACAGCAATTTCACAGCCTGCCTTTAC--------ATCATCGAGGACATATAGGAGCCAAGTAACTGTCACCTTTTTAGTCTGGCCTCAGACTG----------CAATAAATAACTAGCAATAGAATGAACATTGTAA---------AAATATTATTAAAATTTGT s panTro4.chr22 34470683 777 + 49737984 AAT--AGATTTAATCTCAAATTCTGAACAAGAGGAAATATTTCAGCTATGTAAACAGATGGAGAATTTTTGTTATCTAAACTTCtattaataaaatcagattttaaaaaagtaaactttaattttta--attaaaaaatGATTTTGACATGTTTGTCTAC-------ACTagcactgcagacagaaatataatacaaaccacatatataatttaaaattttctaataaccacatttaaaaagtagaaacaggtgagattaattttaacaatgtattttatttaacccaatatatacacatattattaacatttcaatatggtatcaatattaaaacattattagtg--agatgcttaacattctttttttgtgctaa--ttcggaaatctggtgtcca-ttttacccttacag-gcacacctccgtttaaact-ctccaaatttcaagtgctaaatgtgaccactgtgctgggcaatgcagGTCTCTACACTTTATACTCC--TCTA-A--GTTTGCAGTCCTCAGAGTCCTTCTATATTAAACATTTAAACACACCAGTGTTACATTAGTGATTTACCAGGTATCTTAGCTG-ACTTCTGGTAATTGAAGAATGGTGTATT-TATTAGGTGTATGGTTGTAGTTAAAACTTCTACAAAGTGTGACAGCAATTTCATATCCTGCCTTGAC--------ATCATCGAGGACATACAGGAGCCAAGTAACTGTGACCTTTTTAGTCTGGCCTCAGACTG----------CAATAAATAACTAGCAATAGAATGAACATTGtaa---------aaatattattaaaatttgt i panTro4.chr22 C 0 I 373 s ponAbe2.chr22 30887084 775 + 46535552 AAT--AGATTTAATCTCAAATTCTGAACAAGAGGAAATATTTCAGCTATGTAAACAGATGGAGAATTTTTGTTATCTAAACTTCTATTAATAAAACCAGattttaaaaaagtaaactttaattttta--attaaaaaatGATTTTGACATGTTTGTCTAC-------ACTagcactgcagacagaaatataatacaaaccacatatataatttaaagttttctaataaccacatttaaaaagtagaaacaggtgagattaattttaacaatgtattttatttaacccaatatatacacatattattaacatttcaatatggtatcaatattaaaacattattagtg--agatgcttaacattctttttttgtgctaa--ttctgaaatctggtgtccg-ttttacccttacag-gcacacctccgtttaaact-ctccaaatttcaagtgctaaatgtgaccactgtgctgggcaatgcagGTCTCTACATCT--TACTCC--TCTA-A--GTTTGCAGTCCTCAGAGTCCTTCTATATTAAACATTTAAACACACCAGTGTTACATTACTGATTTACCAGGTATCTTAGCTG-ACTTCTGGAAATTGAAGAATGGTGTATT-TATTAGGTGTATGGTTGTAGTTAAAACTTCTACAAAGTGTGACAGCAATTTCACAGCCTGCCTTGAC--------ATCATCGAGGACATATAGGAGCCAAGTAACTGTCACCTTTTTAGTCTGGCCTCAGACTG----------CAATAAATAACTAGCAATAGAATGAACATTGTAA---------AAATATTATTAAAATTTGT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100439668 773 - 115148730 AAT--AGATTTAATCTCAAATTCTGAACAAGAGGAAATATTTCAGCTATGTAAACAGATGGATAATTTTTGTTATCTAAACTTCTATTAATAAAACCAGATTTTAAAAAAGTAAACT----TTTTTA--ATTAAAAAATGATTTTGACATGTTTGTCTAC-------ACTagcactgcagacagaaatataatacaaaccacatatataatttaaaattttctaataaccacatttaaaaagtagaaacaggtgagattaattttaacaatgtattttatttaacccaatatatacacatattattaacatttcaatatggtatcaatattaaaacattattagtg--agatgcttaacattctttttgtgtgctaa--ttctgaaatctggtgtcca-ttttacccttacag-gcacacctccgtttaaact-ctccaaatttcaagtgctaaatgtgaccactgtgctgggcaatgcagGTCTCTACACTTTATACTCC--TCTA-A--GTTCGCAGTCCTCAGAGTCCTTCTATATTAAACATTTAAACACACCAGTGTTACATTACTGATTTATCAGGTATCTTAGCTG-ACTTCTGGAAATTGAAGAATGGTGTATT-TATTAGTTGTATGGTTGTAGTTAAAACTTCTACAAAGTGTGACAGCAATTTCACAGCCTGCCTTGAC--------ATCATCGAGGACATATAGGAGCCAAGTAACTGTCACCTTTTTAGTCTGGCCTCAGACTG----------CAATAAATAACAAGCAATAGAATGAACATTGTAA---------AAATATTATTAAAATGTGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80587272 764 + 95678458 AAT--AGATTTAATCTCAAATTCTGAACAAGAGGAAATATTTCAGCTATGTAAACAGATGGAGAATTTTTGTTATCTAAACTCCTGTTAATAAAACCAGa-tttaaaaaagtaaactttatttttta--attaaaaaatGATTTTGACATGTCTGTCTACNNNNNNNNNNAGCACTACAGAGagaaatataatacaaaccacatatataatttaaaattttctaataatcacatttaaaaagtagaaacaggtgagattaattttaacaatgtattttatttaacccaatatatacaca------taacacttcaatatgatatcaatattaaaacattattagtg--agag--ttagcattctttttttgtgctaa--ttctgaaa--tggtgtcca-ttttacccttatag-gcacacctcagtttaaact-ctccaaatttcaagtgctaaatgtgaccactgtgCTGGGCAATGCAGGTCTCTACACTTTATACTCC--TCTA-A--GTTCGCAGTCCTCAAAGTCCTTCTAAATTAAACATTTAAACACACCAGTGTTACATGAGTGATTTACC---------AGCTG-ACTTCTGGAAATTGAAGAATGGTATATT-TATTAGGTGTATGGTTGTAGTTAAAACTTCTACAAAGTGTGACAACAATTTCACAGCCTGCCTTGAC--------ATCATCGAGGACATATAGGAGCCAAGTAACTGTCACCTTTTTAGTCTGGCCTCAGACTG----------CAATAAATAACAAGCAATAGAATGAACATTGtaa---------aaatattattaaaatttgt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81014088 760 - 96509753 AAT--AGATTTAATCTCAAATTCTGAACAAGAGGAAATATTTCAGCTATGTAAACAGATGGAGAATTTTTGTTATCTAAACTCCTGTTAATAAAACCAGATTTTAAAAAAGTAAACTTTATTTTTTA--ATTAAAAAATGATTTTGACATGTCTGTCTAC-------ACTAGCACTACAGAGagaaatataatacaaaccacatatataatttaaaattttctaataatcacatttaaaaagtagaaacaggtgagattaattttaacaatgtattttatttaacccaatatatacaca------taacacttcaatatgatatcaatattaaaacattattagtg--agatgcttagcattctttttttgtgctaa--ttctgaaa--tggtgtcca-ttttacccttatag-gcacacctcagtttaaact-ctccaaatttcaagtgctaaatgtgaccactgtgctgggcaatgcagGTCTCTACACTTTATACTCC--TCTA-A--GTTCGCAGTCCTCAAAGTCCTTCTAAATTAAACATTTAAACACACCAGTGTTACATGAGTGATTTACC---------AGCTG-ACTTCTGGAAATTGAAGAATGGTATATT-TATTAGGTGTATGGTTGTAGTTAAAACTTCTACAAAGTGTGACAACAATTTCACAGCCTGCCTTGAC--------ATCATCGAGGACATATAGGAGCCAAGTAACTGTCACCTTTTTAGTCTGGCCTCAGACTG----------CAATAAATAACAAGCAATAGAATGAACATTGTAA---------AAATATTATTAAAATTTGT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76271169 764 + 90941950 AAT--AGATTTAATCTCAAATTCTGAACAAGAGGAAATATTTCAGCTACGTAAACAGATGGAGAATTTTTGTTATCtaaactcctattaataaaaccagattttaaaaaagtaaactttatttttta--attaaaaaatgattttgacaTGTCTGTCTAC-------ACTAGCACTAC--AGAGAAATATAATACAaaccacatatataatttaaaattttctaataatcacatttaaaaagtagaaacaggtgagattaattttaacaatgtattttatttaacccaatatatacacatattattaaCACTTCAATATGATAtcaatattaaaacattattagtG--AGATGCTTAGCATTCTTTTTTCGTGCTAA--TTCTGAAA--TGGTGTCCA-TTTTACCCTTATAG-GCACACCTCAGTTTAAACT-CTCCAAATTTCAAGTGCTAAATGTGACCACTGTGCTGGGCAATGCAGGTCTCTACACTTTATACTCC--TCTA-A--GTTCGCAGTCCTCAAAGTCCttctaaattaaacatttaaacacaCCAGTGTTACATGAGTGATTTACC---------AGCTG-ACTTCTGGAAATTGAAGAATGGTATATT-TATTAGGTGTATGGTTGTAGTTAAAACTTCTACAAAGTGTGACAACAATTTCACAGCCTGCCTTGAC--------ATCATCGAGGACACACAGGAGCCAAGTAACTGTCACCTTTTTAGTCTGGCCTCAGACTG----------CAATAAATAACAAGCAATAGAATGAACATtgtaa---------aaatactattaaaatttgt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18540943 775 + 33263144 AAT--AGATTTAATCTCAAATTCTGAACAAGAGGAAATATTTCAGCTATGTAAACAGATGGAGAATTTTTGTTATCTAAACTCCTATTAATAAAACCAGATTTTAAAAAAGTAAACTTTATTTTTTA--ATTAAAAAATGATTTTGACATGTCTGTCTAC-------ACTAGCACTACAGAGagaaatataatacaaaccacatatataatttaaaattttctaataatcacatttaaaaagtagaaacaggtgagattaattttaacaacgtattttatttaacccaatatatacacatattattaacacttcaatatgatatcaatattaaaacattattagtg--agatgcttagcattctttttttgtgctaa--ttctgaaa--tggtgtcca-ttttacccttatag-gcacacctcagtttaaact-ctccaaattttaagtgttaaatGTGACCACTGTGCTGGGCAATGCAGGTCTCTACACTTTATACTCC--TCTA-A--GTTCGCAGTCCTCAAAGTCCTTCTAAATTAAACATTTAAACACACCAGTGTTACATGAGTGATTTACCAGGTATCTTAGCTG-ACTTCTGGAAATTGAAGAATGGTGTATT-TATTAGGTGTATGGTTGTAGTTAAAACTTCTACAAAGTGTGACAGCAATTTCACAGCCTGCCTTGAC--------ATCATCGAGGAGATATAGGAGCCAAGTAACTGTCACCTTTTTAGTCTGGCCTCAGACTG----------CAATAAATAACAAGCAATAGAATGAACATTGTAA---------AAATATTATTAAAATTTGT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198244737 778 + 210400635 AAT--AGATTTAATCTCAAATTCTGAACAAGAGGAAGTATTTCAGCTACATAAACAGATGGAAAATTTTTGTTATCTATATTTCTATTAATAAAACCAGGTTTTAAAAAAGTAAACTTTAATTTTGA--ATTAAAAAATGATTTTGACATGTTTGTCTAC-------ACcagcactatagacagaaatat-----aagccacatacatagtttaaaattttctaataaccacatttaaaaagtagaaacaggtgaaattaattttgacaatgtattttatttaatccaatatatacaca---tattaacatttcaatatggtatcaatattaaaacattattactg--agatgcttaatattctttttttgtgctaa--ttctgaaatctggtatccatttttacccttacag-gcacacctcagtttaaact-ctccacatttcaagtgctaaatgtgaccactgtagtgggcaatgcagGTCTCTATACTTTATACTCC--TCTA-A--GTTCTCAGTCCTCAAAGTCCTTCTATATTAAACATTTAAACACACCAGGGTTACATTTATGATTTGCCAGGTATCTTAGCTG-ACTTCTGGAAACTGAAGAATGGTATATT-TATGAGGTGTATGGTTTTAGTTAAAACTTCTACAATGGGTGACAGCAATTTCATAGCCTGCCTTGACATCCATTTATCATTGAGGACATTCAAGAGCCAAGTAACTGTCACCTTTTTAGTCTGGCCTCAGACTG----------CAATAAATAACAAGCAACAGAATGAACATTGtaa---------aaatgttattaaaatttgt i calJac3.chr1 C 0 C 0 s mm10.chr15 77109408 708 + 104043685 acc--cAATTTACTATTAAATTCT-------------TAGTTCAAGTGTGTAAGGCAATGG-------TTTTTATTTA-ACCCCCATTAATAAAAATAGA-TAACAAAAAGTAAACTTG--TTTTTC--ATTAAGAAAAGA---TGTAACATTTGCTTAC-------ACTaacactgccca-------acagaaccagtgcctcgtagactttaag---tcttgacagtcacattaaaataacagaag-----gagattaa---caaca--------cattcaacctagtgtata-acacgtt--tatcatctcaatatgacagcaataggaacaccccacccatgcaagagggccggtgttctctct--gtgctaagcctctg-----tagtgtcaa-gtgtgtgtgtatagtgcaaatctcaacttagacTCCTTCATGTCTC---TAACCAGTGGTGCCACAGCGC---ACAGCACAGGTCCATACA-----GACTTG--TTTT-AGGGTTCTCAGTCCT--------GTCAATGTTAA-----TGAAACTGCTAGGGTTGCACCAGCAGCTTCCCAACTGTTTTAGCTGTACTT------------AAACAGAGCATCATGTTAGGTGCACGGCTGTGGTC-CAACTTCCATCAGAAG-AATAGTGTGTTCCTA-CCTGCCTTGCCACCCATTTATCAT----AACACAAAGGAGCCGAGTAACTGTCACCTTTTTGGTCTGGCCTCAGGGTGTAATAAGTAACAATAAGTAACAAGCAATAGGATAAACAGTGtaatatatatatatatatattttaattttgt i mm10.chr15 I 224 C 0 s canFam3.chr10 40868691 737 - 69331447 AACCAAGATTTAATCTCAAATTCTTAACAAGAGTAAACATTTCAGGTATTTAAGAAGATAA------------------------------AAAAACAGATAAACAAAAAGTACTTTTATATTTTTATGATAAAAAAAAGATGTTG----GTTTGTCTAT-------AC--------CTGacagaagcataatacaagccacatatataattttaaatattctactagccacattaaaaaagtaaaaatatatgaaagtaatttca--agtgtattttgtttaaaataaagtatatgcaatatacta-----tcaacatggcatcaatataaaaac---attaatg--agatgtttaatatcccttttttctgctatgtctttgaaat-cgacgtgta-tcttacactca-aa-gcacatctaaatttagact-tgccacatttcaagtgctcaatatggccactgtactggacaatgcaTGTCTATATGCTTTATACTGTAAACTACA--GCTCTCAGTTCCGAAACTCCTTCTGTGACAGTAATTTAAATATGCCAGTGTTACATTAGTGATTTAAC-GCCATCTTAGCAG-TCTTGTGAAAACTGAGGAATGGTGCATC-TATCAGGATTATGACTGTGGTCAAAACTCCTACCAAGGGTGACAAACATTTTACCACCTGTTTTAATATCCGTTTATCATCAAGGGACT--AGGAGCCGAATAACTGCCACCTTTTTAGTCTGGCCTCAGACTG----------CAATAAATAACAAGCAATAGAATGAGCATTGTAA--------AAAATATTCTT-AAATTTGT i canFam3.chr10 C 0 C 0 a score=1449005.000000 s hg38.chr22_KI270876v1_alt 93880 383 + 263666 ATAATTTTTGAATTTTTCGATCTCAGAAGAATGAGAAAGAAAATTTACCATG-TAACTTTTAAGGGAGAAATCAAAAGCAGACAGATCTCCTGGGTATGGCCAGAACACAGaaatttaaa--aataaataaaaa--aa-atataa----aactaaagcccat--aa--tggtaacaaaagaaaaaaaaaaaac--------aaaCTAAGCCCTTCAGAAACACATGCACTGTTAATTCTGTTTTAAATATAAT---AAAAACCATTTCACTTTGAC----ATTACC-TATTAAGTTTTACTGAAAGTCA-AAAGGCCTACTTACTGTG----ACTTCCAAAAAAGTATTTTGATAATATTTTGAAAGAAATAAATAATTTCCCTTTGCATGAAATTAAAAGCCATGATAATAGGGAAA s panTro4.chr22 34471833 380 + 49737984 ATAATTTTTGAATTTTTCGATCTTAGAAGAATGAGTAAGAAAATTTACCATGGTAACTTTTAAGGGAGAAATCAAAAGCAGACAGATTTTCTGGGTATGGCCAGAACACAGaaattaaaa--aataaataaata--aa-atataa----aGCTAAAGCCCAT--AA--TGGTAACAAAAGAAAAAAAAAAAAC------------TAAGCCCTTCAGAAACACATGCACTGTTAATTCTGTTTTAAATATAAT---AAAAACCATTTCACTTTGAC----ATTACC-TATTAATTTTTACTGAAAGTCA-AAAGGCCTACTTACTGTG----ACTTCCAAAAAAGTATTTTGATAATATTTTGAAAGAAATAAATAATTTCCCTTTGCATGAAATTAAAAGCCATGATAATAGGGAAA i panTro4.chr22 I 373 C 0 s ponAbe2.chr22 30887859 383 + 46535552 ACAATTTTTGAATTTTTCCATCTCAGAAGAATGAGAAAGAAAATTTACCATG-TAACTTTTAAGGGAGAAATCAAAAGCAGACGGATCTCCTAGGTATGGCCAGaacacagaaattaaaa--aataaataaaaa--aa-atataa----aactaaagcccat--aa--tggtaacaaaagaaaaaaaaaaaCT------------TAAGCCCTTCAGAAACACATGCACTGTTAATTCAGTTTTAAATATAACAAAAAAAACCATTTCACTTCAAC----ATTACC-TATTAAGTTTTACTGGAAGTCACAAAGGCCTACTTACTGTG----ACTTCCAAAAAAGTATTTTGATAATATTTTGAAAGAAATAAATAATTTCCCTTTGCATGAAATTAAAAGCCATGATAATAGGGAAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100440441 380 - 115148730 ACAATTTTTGAATTTTTCGATCTCAGAAGAATGAGAAAGAAAATTTACCATG-TAACTTTTAAGGGAGAAATCAAAAGCAGACGGATCTCCTGGGTATGGCCAGAACACAGAAATTAAAA--CATAAATAAAAA--AATATATAA----AACTAAAGCCCAT--AA--TGGTAACAGAAGAAAAAAAAGAAAA-------AAAACTAAGCCCTTCAGAAACACATGCACTGTTAATTCAGTTTTAAATATAATAAAAAAAACCATTTCACTTCGAC----ATTACC-TATTAAGTTTTACTGAAAGTCACAAAGGCC----TACTGTG----ACTTCCAAAAAAGTATTTTGATAATATTTTGAAAG-AATAAATAATTTCCCTTTGCATGAA--TTAAAGCCA-GAT-ATAGGAAAA i nomLeu3.chr7b C 0 M 177 s rheMac3.chr10 80588036 396 + 95678458 ataatttttgaatttttCGATCTCAGAAGAATGAGAAAGAAAATTTACCATG-TAACTTTTAAGGGAGAAATCAAAAGCAGACGGATCTCCTGGGTATGGCCAGaacacagaaataaaaaaaaaataaaaaata--aa-aaataa----aactaaagcccat--aa--tggtaacaaaag-aaaaaaaaaacaaaaacaaaaaATTAAGCCCTTCAGAAACACATGCACTGTTAATTCAGTTTCAAATATAATAAAAAAAGCCATTTCACTCCAAC----ATTACC-TATCAAGTTCTACTGAAAGTCACAAAGGCCTACTTACTGTA----ACTTCCAAAAAAGTATTTTGATAATACTTTGAAAGAAATAATTAATTTCCCTTTGCATGAAATTAAAAGCCATGATAATAGGAAAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81014848 397 - 96509753 ATAATTTTTGAATTTTTCGATCTCAGAAGAATGAGAAAGAAAATTTACCATG-TAACTTTTAAGGGAGAAATCAAAAGCAGACGGATCTCCTGCGTATGGCCAGAACACAGaaataaaaaataaaaataaaaaa--at-atataa----aactaaagcccat--aa--tggtaacaaaagaaaaaaaaaaacaaaaacaaaaaATTAAGCCCTTCAGAAACACATGCACTGTTAATTCAGTTTCAAATATAATAAAAAAAGCCATTTCACTCCAAC----ATTACC-TATCAAGTTCTACTGAAAGTCACAAAGGCCTACTTACTGTG----ACTTCCAAAAAAGTATTTTGATAATACTTTGAAAGAAATAATTAATTTCCCTTTGCATGAAATTAAAAGCCATGATAATAGGAAAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76271933 394 + 90941950 ataatttttgaatttttcgatctcagaagaatgagaaagaaaatttacCATG-TAACTTTTAAGGGAGAAATCAAAAGCAGACGGATCTCCTGGGTATGGCCagaacacagaaattaaaa--aaaaaataaaaa--aa-atataa----aactaaagcccat--aa--tggtaacaaaag-aaaacaaaaacaaaaacaaaaaattaagcccTTCAGAAACACATGCACAGTTAATTCAgtttcaaatataataaaaaaagccATTTCACTCCACC----ATTACC-TATCAAGTTCTACTGAAAGTCACAAAGGCCTACTTACTGTG----ACTTCCAAAAAAGTATTTTGATAATactttgaaagaaataattaatttcCCTTTGCATGAAATTAAAAGCCATGATAATAGGAAAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18541718 396 + 33263144 ATAATTTTTGAATTTTTCGATCTCAGAAGAATGAGAAAGAAAATTTACCATG-TAACTTTTAAGGGAGAAATCAAAAGCAGACGGATCTCCTGGGTATGGCCAGAACACAGAAATTaaaa--aaaaaataaaaa--aa-atataa----aactaaagcccat--aa--tggtaacaaaagaaaaacaaaaacaaaaacaaaaaaTTAAGCCCTTCAGAAACACATGCACTGTTAATTCAGTTTCAAATATAATAAAAAAAGCCATTTCACTCCAAC----ATTACCATATCAAGTTCTACTGAAAGTCACAAAGGCCTACTTACTGTG----ACTTCCAAAAAAGTATTTTGATAACACTTTGAAAGAAATAATTAATTTCCCTTTGCATGAAATTAAAAGCCATGATAATAGGAAAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198245515 389 + 210400635 ataattttttaatttttCAATCTCAGAAGAATGAGAAAGAAAATTTACCATG-TAACTTTTAAGGGAGAAATCAAAAGCAGACGGATCTCCTGGGTATGGCCAGAACACAGAAATTAaaa--aataaatgaaaaataa-aaataa----aaataaaGCCCATCAAA--TGGTAACAAAAGAAAAAAAAAAA--------------TAAGCCCCTCAGAAACACATGCACTGTTAATTCAGTTTTAAATATGATTGAAAACACCATTTCACTTCGAC----ATTACC-TACCAAGTTTTACTGAAAGTCACAAAGGCCTACTTAGTGTGACTTACTTCCAAAAAAGTAACTTAATAATGTTTTGAAAGAAATAAATAATTTCCCTTTGCATGAAATTAAAGGCCATGGTAAAAGGCAAA i calJac3.chr1 C 0 I 2 s mm10.chr15 77110116 367 + 104043685 ataaattttgaatttttCCATCTCAGAAGAATGAGAAAGAAAATTTACCATG-TAACTTTAAAGGGAGAAATCAAAAGCAGATGGATCTCCTGGGTATGGCCAGAACACAGAAATTAAAA--AATAAATGAAAG--AA-AGAAAAAAACAACTAAAACCCAT--AAAGTGGTAACAAGAAAAATAAA------------------TGAAGCCTTCTG-GACATACACATTATTAATTCAGTTTTAAGTACAGTAGAAAA---CATTTCATGCCATC----ATTATC-TATC-AGTTTTACTGACAATCATATAGGCCCACTTAGCATT-----CTTCAAAGAGAATCTTTTGACCATGTTTGGAAGTAA-----TAATTTCTCTTCATGTGCAATCAAAAGCCAAGGCAATGG----- i mm10.chr15 C 0 C 0 s canFam3.chr10 40869428 379 - 69331447 ATAATCTTTG--TTTTTCCATCTCAGAAGAATGAGAAAGAAAATTTACCATG-TAACTTTTAAGGGAGAAATCAAAAGCAGAC-GTTCTCCTG-GTATGGCCAGaacacagaaattaaaa--aataaataaaag--aa-aaataa----aactaaaacccat--aagatggtaaaaaaaaatgataataaaT-------------TAAGCCCTTTGAAAATACATGCACTGTTAATTCAGTTTTAAGTATAATGAGAAA---CATTTCAACTCAGCATTTATTACC-TATCGAATTTTACTGAAAAGC--AAAGGCCTAGTTAGTGCA----ATTTCAAAGACAGTCTTTTGACCATATTTTGAAAGAAATAAATAATTTCCCTTTGCATGAAATAAAAATCCAGGGAAACAGGCAAG i canFam3.chr10 C 0 C 0 a score=267852.000000 s hg38.chr22_KI270876v1_alt 94263 99 + 263666 ACATTACAGCAAATTACTTGTGTCTAAGGAATGGGAATAGAAGTTTTATCTCCCCTAACTACAGCCTAAACTTAAGCCCAACCTAAACCTAGATCCCCA s panTro4.chr22 34472213 99 + 49737984 ACATTACAGCAAATTACTTGTGTCTAAGGAATGGGAATAGAAGTTTTATCTCCCCTAACTACAGCCTAAACTTAAGCCCAACCTAAACCTAGATCCCCA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30888242 99 + 46535552 ATATTACAGCAAATTACTTGTGTCTAAGGAATGGGAATAGAAGTTTTATCTCCCCTAACTACAGCCTAAACTTAAGCCCAACCTAAACCTAGATCCCCA i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80588432 99 + 95678458 ACATTATAGCAAATTACTTGTGTCTAAGGAATGGGAATAGGTGTTTTATCTCCCCTAACTACAGCCTAAACTTAAGCCCAACCTAAACCTAGATCCCCA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81015245 99 - 96509753 ACATTATAGCAAATTACTTGTGTCTAAGGAATGGGAATAGGCGTTTTATCTCCCCTAACTACAGCCTAAACTTAAGCCCAACCTAAACCTAGATCCCCA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76272327 99 + 90941950 ACATTATAGCAAATTACTTGTGTTTAAGGAATGGGAATAGGCGTCTTATCTCCCCTAACTACAGCCTAAACTTAAGCCCAACCTAAACCTAGATCCCCA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18542114 99 + 33263144 ACATTATAGCAAATTACTTGTGTCTAAGGAATGGGAATAGGCGTTTTATCTCCCCTAACTACAGCCTAAACTTAAGCCCAACCTAAACCTAGATCCCCA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198245906 99 + 210400635 ACATTACAGCAAATTACTTGTGTCTAAGGAATGGAAATAGAAGTTTTATCTCCTCTAACTACAGCCTAAACTTAAGCCTAACCTAAACCTAGATTTCCA i calJac3.chr1 I 2 C 0 s mm10.chr15 77110483 52 + 104043685 --------------CTCTTGTGTCTGAGGAG-AAGAGTGTGCGTCTT------------------CCACACTCGGGCCTGTCCTG-------------- i mm10.chr15 C 0 C 0 s canFam3.chr10 40869807 73 - 69331447 AAATTACAGCACGTTACTTG--------------------------TATCTTCCCTGACTCCAGCCTAAACTGAAGGCTAACCCAAATTCAGATCCCCA i canFam3.chr10 C 0 C 0 e nomLeu3.chr7b 100440821 177 - 115148730 M a score=154206.000000 s hg38.chr22_KI270876v1_alt 94362 38 + 263666 TTATTCCAGAAATCTACCTGAGAGAAGTAATGAGAACA s panTro4.chr22 34472312 38 + 49737984 TTATTCCAGAAATCTACCTGAGAGAAGTAATGAGAACA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30888341 38 + 46535552 TTATTCCAGAAATCCACCTGAGGGAAGTAATGGGAACA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100440998 38 - 115148730 TTATTCCAGAAATCCACCTGAGAGAAGTAATGAGAACA i nomLeu3.chr7b M 177 C 0 s rheMac3.chr10 80588531 38 + 95678458 TTATTCCAGAAATCCACCTGAGAAAAGTAATGAGAACA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81015344 38 - 96509753 TTATTCCAGAAATCCACCTGAGAAAAGTAATGAGAACA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76272426 38 + 90941950 TTATTCCAGAAATCCACCTGAGAAAAGTAATGAGAACA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18542213 38 + 33263144 TTATTCCAGAAATCCACCTGAGAAAAGTAATGAGAACA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198246005 38 + 210400635 TTATTCCCGAAATCCACCTGAGAGAATTAATGAGAACA i calJac3.chr1 C 0 C 0 s mm10.chr15 77110535 31 + 104043685 -------AGGGATCCACCTGAGAGAGGGAAGGAGAACA i mm10.chr15 C 0 I 35 s canFam3.chr10 40869880 37 - 69331447 TCATTCCAGATATCCACCTGTGAGA-GTAATGAAAAAA i canFam3.chr10 C 0 C 0 a score=36954.000000 s hg38.chr22_KI270876v1_alt 94400 27 + 263666 CATTAAGTAAACATTTGCTagaataat s panTro4.chr22 34472350 27 + 49737984 CATTAAGCAAACATTTGCTagaataat i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30888379 27 + 46535552 CGTTAAGTAAATATTTGCTAGAATAAC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100441036 27 - 115148730 CGTTAAGTAAATATTTGCTagaataat i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80588569 19 + 95678458 TGTTaagcaaatatttgct-------- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81015382 19 - 96509753 TGTTaagcaaatatttgct-------- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76272464 19 + 90941950 TGTTAAGCAAATATTTGCT-------- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18542251 19 + 33263144 TGTTAGGCCaatatttgct-------- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198246043 27 + 210400635 TGGTAAGGAGATATTTGCTAGGATAAC i calJac3.chr1 C 0 C 0 s canFam3.chr10 40869917 8 - 69331447 -------CAAGTAAT------------ i canFam3.chr10 C 0 C 0 e mm10.chr15 77110566 35 + 104043685 I a score=401330.000000 s hg38.chr22_KI270876v1_alt 94427 145 + 263666 tagaatgttcctagcataaagaaaagataaatatttaaggtgatggctatcccaattactctgatttgattatatgaatgtatcagattatcacatataccctgaaaatatgtacatctaatatctatcaatttttaaaaaa---gaa s panTro4.chr22 34472377 145 + 49737984 tagaatgttcctagcataaagaaaagataaatatttaaggtgatggctatcccaattactctgatttgattatatgaatgtatcagattatcacatataccctgaaaatatgtacatctaatatctatcaatttttaaaaaa---gaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30888406 145 + 46535552 CAgaatgttcctagcataaagaaaagataaatatttcaggtgatggctatcccaattactctgatttgattatatgaatgtatcagattatcacatatagcctgaaaatatgtacatctaatatctatcaattttaaaaaaa---gaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100441063 145 - 115148730 tagaatgttactagcataaagaaaagataaatatttaaggtgatggctatcccaattactctgatttgattatatgaatgtatcagattatcacatataccctgaaaatatgtacatctaatatctatcaattttaaaaaaa---gaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80588588 143 + 95678458 ----atgggcctagtgtaaagagaagataaatatttaaggtgatagctatcccaattactctgatttgattatatgaatgtatcggattatcacatataccctgaaaatatgtacatctagtatctattgattttagaaaaaag-aaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81015401 144 - 96509753 ----atgctcctagtgtaaagaaaagataaatatttaaggtgatagctatcccaattactctgatttgattatatgaatgtatcggattatcacatataccctgaaaatatgtacatctagtatctattgattttagaaaaaagaaaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76272483 143 + 90941950 ----ATGCTCCTAgtgtaaagaaaagataaatatttaaggtgatagctatcccaattactctgatttgattatatgaatgtatcgGATTATCACATAtaccctgaaaatatgtacatctagtATCTAttgattttagaaaaaag-aaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18542270 144 + 33263144 ----atgctcctagtgtaaagaaaagataaatatttaaggtgatagctatcccaattactctgatttgattatatgaatgtatcagattatcacatataccctgaaaatatgtacatctagtatctattgattttagaaaaaagaaaa i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198246070 135 + 210400635 tagaatgttcctag-----agtaaagataaatttttaaggtgatggctgttccaattactc-----taattatatcaatgtattagattatcacatataccctgaaaatatgtacatttaatatctatcaatttttaaaaaa---gaa i calJac3.chr1 C 0 C 0 e mm10.chr15 77110566 35 + 104043685 I e canFam3.chr10 40869925 0 - 69331447 C a score=761222.000000 s hg38.chr22_KI270876v1_alt 94572 233 + 263666 aaAAAATTGCTAGAAATCTAAATAATTATTGCTGGGCTGTATAATATTTGTAGTCCTTTAGTAGACT-TAATAATGAGCACTATCTGAAGAGCTGAACAACTTCAGCATATTCAATATTT--------------------------------TAATACATATCCATTCAATAGAGGA-TATACC-AAAGTATTTTGGCAAAAACTTATAGAAAATGTAAATGTTACAATCTGTGTATTTCTTTATTTAATAA----GCTTGATAATTATCAC s panTro4.chr22 34472522 233 + 49737984 aaAAAATTGCTAGAAATCTAAATAATTATTGCTGGGCTGTATAATATTTGTAGTCCTTTAGTAGACT-TAATAATGAGCACTATCTGAAGAGCTGAACAACTTCAACATATTCAATATTT--------------------------------TAATACATATCCATTCAAGAGAGGA-TATACC-GAAGTATTTTGGCAAAAACTTATAGAAAATGTAAATGTTACAATCTGTGTATTTCTTTATTTAATAA----GCTTGATAATTATCAC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30888551 233 + 46535552 aAAAAATTGCTAGAAATCTAAATAATTATTGCTGGGCTGTATAATATTTGTAGTCCTTTAGTAGACT-TAATAATGAGCACTATCTGAAGAGCTGAACAACTTCAACATATTCAATATTT--------------------------------TAATACATATCCATTCAAGAGACGA-TATACT-GAAGTATTTTGGCAAAAACTTATAGAAAATGTAAATGTTACAATCTGTGTATTTCTTTATTTAATAA----GCTTGATAATTATCAC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100441208 233 - 115148730 aAAAAATTGCTAGAAATCTAAATAATTATTGCTGGGCTGTATAACATTTGTAGTCCTTTAGCGGACT-TAATAATGAGCACTATCTGAAGAGCTGAACAACTTCAACATATTCAATATTT--------------------------------TAATACATATCCATTCAAGAGACGA-TATACC-GAAGTATTTTGGCAAAAATTTATAGAAAATGTAAATGTTACAATCTGTGTATTTCTTTATTTAATAA----GCTTGATAATTATCAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80588731 230 + 95678458 aAAAAATTGCTAGAAATCTCAGTAATTACTTCTGGGCTGTATAATATTTGTAGTTCTTTAGTGGACT----TAATAAGCACTACCTGAAGAGCTGAACAGTTTCAACACATTCAATATCT--------------------------------TAATACATATCCATGCAAGAGATGA-TATACC-AAAATATTCTGGCAAAAATTTATAGAAAACGTAAATGTTACAATCTGTGTATTTCTTTATTTAATAA----GTTTGATAATTATCAC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81015545 230 - 96509753 AAAAAATTGCTAGAAATCTCAGTAATTACTTCTGGGCTGTATAATATTTGTAGTTCTTTAGTGGACT----TAATAAGCACTACCTGAAGAGCTGAACAGTTTCAACACATTCAATATCT--------------------------------TAATACATATCCATGCAAGAGATGA-TATACC-AAAATATTCTGGCAAAAATTTATAGAAAACGTAAATGTTACAATCTGTGTATTTCTTTATTTAATAA----GTTTGATAATTATCAC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76272626 233 + 90941950 aaaaaattgctagaaATCTCAGTAATTACTTCTGGGCTGTATAATATTTGTAGTTATTTAGTGGACT-TAATAATAAGCACTATCTGAAGAGCTGAACAGTTTCAACACGTTCAATATCT--------------------------------TAATACATATCCATGCAAGAGATGA-TATACC-AAAATATTCTGgcaaaaatttatagaaaacgTAAATGTTACAAtctgtgtatttctttatttaataa----gtTTGATAATTATCAC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18542414 233 + 33263144 AAAAAATTGCTAGAAATCTCAGTAATTATTTCTGGGCTGTGTAATATTTGTAGTTCTTTAGTGGACT-TAATAATAAGCACTATCTGAAGAGCTGAACAGTTTCAACACATTCAATATCT--------------------------------TAATACATATCCATGCAAGAGATGA-TATACC-AAAATATTCTGGCAAAAATTTATAGAAAACGTAAATGTTACAATCTGTCTATTTCTTTATTTAATAA----GTTTGATAATTATCAC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198246205 233 + 210400635 aaAAAATTGCTAGAAATCTCAATACTTATTGCTGGGCTGTACAATGTTTGTAGTCTTTTAGTGGACT-TAATAATTAGCACTATCTGAAGAGCTGAACAGTCTCAACATATTTAACATCT--------------------------------TAATATATACCCCTTCAAGAGACGA-TATACC-AAAGTATCCTGGCAAAAATTTATAGAAAATGTAAATGCTATAATCTGTGTATTTCTTTATTTGATAA----GCTTGATAATTATCAC i calJac3.chr1 C 0 C 0 s canFam3.chr10 40869925 268 - 69331447 AAAAACTTGCTAGAAATCTCAGTAATGGTTGCTATACTTTA----GTCTGTGGTCCTTTAGTGAACTTTAACAGTTGGCACTGTCTGAAGACGTGAAGAACTCCTACACATTCAGtattttttatttttatttttttCACATTCAGTATTTATGATACATGTCCCTTAGAGCAACAACCACACCAAAAGTAGGTTGACAAAACTTTACGGAAAATATAAAAATTAGAATGTGTACATTTCTTAATACGATAATTATATGTGATAATTATCAC i canFam3.chr10 C 0 C 0 e mm10.chr15 77110566 35 + 104043685 I a score=213520.000000 s hg38.chr22_KI270876v1_alt 94805 58 + 263666 -CAAAAATTGTTATGTGGTTGGATGATGGTGAGT-AAGATGGTAGAAAGTC---TGACCCACA s panTro4.chr22 34472755 58 + 49737984 -CAAAAATTGTTATGTGGTTGGATGATGGTGAAT-AAGATGGTAGAAAGTC---TGACCCACA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30888784 58 + 46535552 -CAAAAATTGTTATGTGGTTGGATGATGGTAAAT-AAGATGGTAGAAAGTC---TGACCCACA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100441441 58 - 115148730 -CAAAAATTGTTATGTGGTTGGATGATGGTGAAA-AAGATGGTAGAAAGTC---TGACCCACA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80588961 58 + 95678458 -CAAAAATTGTTCTGTGGTTGGATGATGGTGAAT-AAGATGGTAGAAAGTC---TGATCCACA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81015775 58 - 96509753 -CAAAAATTGTTCTGTGGTTGGATGATGGTGAAT-AAGATGGTAGAAAGTC---TGATCCACA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76272859 58 + 90941950 -CAAAAATTGTTCTGTGGTTGGATGATGGTGAAT-AAGATGGTAGAAAGTC---TGATCCACA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18542647 58 + 33263144 -CAAAAATTGTTCTGTGGCTGGATGATGGTGAAT-AAAATGGTAGAAAGTC---TGATCCACA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198246438 58 + 210400635 -CAAAAATTATTATGTGGCTAAATGATGGTGAAT-ACGATGGTAGAAAGTC---TGATCCACA i calJac3.chr1 C 0 C 0 s mm10.chr15 77110601 61 + 104043685 -CAGAGACGGCTTGGTAGCTGG-TGACAGTGAGTGAAGAGAGTGGGAAGCCCCACGCTCAACA i mm10.chr15 I 35 C 0 s canFam3.chr10 40870193 59 - 69331447 AAACAAATTGCTATAGGGCTGGGTGATAGTGAAC-AGAATGGTGGGaagtc---tgagtcaga i canFam3.chr10 C 0 I 282 a score=32371.000000 s hg38.chr22_KI270876v1_alt 94863 11 + 263666 ATGGAATAACT s panTro4.chr22 34472813 11 + 49737984 ATGGAATAACT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30888842 11 + 46535552 ATGGAATAACT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100441499 11 - 115148730 ATGGAATAACT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80589019 11 + 95678458 ATGGAATAACT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81015833 11 - 96509753 ATGGAATAACT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76272917 11 + 90941950 ATGGaataact i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18542705 11 + 33263144 ATGGAATAACT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198246496 9 + 210400635 AAGGAATA--T i calJac3.chr1 C 0 C 0 s mm10.chr15 77110662 11 + 104043685 ATGGGACGAAC i mm10.chr15 C 0 C 0 e canFam3.chr10 40870252 282 - 69331447 I a score=1255710.000000 s hg38.chr22_KI270876v1_alt 94874 396 + 263666 ------------------------TTTGAATAA-AACAAGTTCTTAATCACTAAAAGTTTCTAGCAGAGAA-TGCAAGGT--CAAGAATACAGGGGGCTGAACTAGGTGACC---ATTTTGGGTTATGTTTTAAGGTTCTATATGAGAAAATAAGACTAGAAGG--ATACATGAGAATATCACTAGTGCACATTTCTCTTTAATAAACTATGTATTTTTTTCTTTATACTTTTCATTAAGCATCATGTTTTCCTTTT------------CAAAGACTGCTTTTT-TAAGATGTTACCCAAAGCATATAtaaggagagta----aatagtttatcattcaaactgggacattc-tgagagagaaaggggtcatttattaataattatgctaagataacaggtgt-aaattgaggctagcct-ggataagccaggaaatatggtcactcta s panTro4.chr22 34472824 396 + 49737984 ------------------------TTTGAATAA-AACAAGTTCTTAATCACTAAAAGTTTCTAGCAGAGAA-TGCAAGGT--CAAGAATACAGGGGGCTGAACTAGGTGACC---ATTTTGGGTTATGTTTTAAGGTTCTATATGAGAAAATAAGACTAGAAGG--ATACATGAGAATATCAGTAGTGCACATTTCTCTTTAATAAACTATGTATTTTTTTCTTTATACTTTTCATTAAGCATCATGTTTTCCTTTT------------CAAAGACTGCTTTTT-TAAGATGTTACCCAAAGGATATAtaaggagagta----aatagtttatcattcaaactgggacattc-tgagagagaagggggtcatttactaataattatgctaagataacaggtgt-aaattggggctagcct-ggataagccaggacatatggtcactcta i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30888853 396 + 46535552 ------------------------TTTGAATAA-AACAAGTTCTTAATCACTAAAAGTTTCTAGCAGAGAA-TGCAAGAT--CAAGAATACAGGGGGTTGAACCAGGTGACC---ATTTTGGGTTATATTTCAAGGTTCTATATGAGAAAATAAAACTAGAAGG--ATACATGAGAATATCAGTAGTGCACATTTCTCTTTAATAAACTATGTATTTTTTTCTTTATACTTTTCATTAAGCATCATGTTTTCCTTTT------------CAAAGACTGGTTTTT-TAAGATGTTACCCAAAGGATATAtaaggagagta----aatagtttatcattcaaactggggcattc-tgagagagaaaggggtcatttattaataattatgctaagataacagatgt-aaattggggctatcct-ggataagccaggacatatggtcactcta i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100441510 391 - 115148730 ------------------------TTTGAATAA-AACAAGTTCTTAATCACTAAAAGTTTCTAGCAGAGAA-TGCAAGGT--CAAGAATACAGGGGGTTGGACTAGGTGACC---ATTTTGGGTTATGTTTTAAGGTTCTATATGAG-----AAGACTAGAAGG--ATCCATGAGAATATCAGTAGTGCACATTTCTCTTTAATAAACTATGTATTTTTTTCTTTATACTTTTCATTAAGCATCATGTTTTCCTTTT------------CAAAGACTGCTTTTT-TAAGACGTTACCCAAAGGATATACAAGAAGAGTA----Aatagtttatcattcaaactgggacattc-tgagagagaaaggggtcatttattaataattatgctaagataacaggtgt-aaattggggccatcct-ggataagccaggacatatgctcactcta i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80589030 399 + 95678458 ------------------------TTTGAAAAA-AACAAGTTCTTAATCACTAAAAATTTCTAGCAGAGAA-TGCAAGGT--CAAGAATACAGGGGGTTGAACTAGGTGACC---ATTTTGGGTTATGTTTTAAGGTTCTATATGAGAAAATAAGACTAGAAGG--ATACATGAGAATATCAGTAGTGAACATTCCTCTTCAATAAACTATGTATCTTTTTCTTTATACTTTTCATTAAGCATCATGTTTTCCTTTT------------GAAAGACTGCTTTTT-TAAGATGCTACCTAAAGGATATATACGGagagtaa-acaatagtttatcattcaaactgggacactt-tgagggagaaaggggtcatttattaataattatgcgaagacaataggttt-aaaccggggctatcct-ggataagccaggacatacggtcactcta i rheMac3.chr10 C 0 I 4 s macFas5.chr10 81015844 399 - 96509753 ------------------------TTTGAAAAA-AACAAGTTCTTAATCACTAAAAATTTCTAGCAGAGAA-TGCAAGGT--CAAGAATACAGGGGGTTGAACTAGATGACC---ATTTTGGGTTATGTTTTAAGGTTCTATATGAGAAAATAAGACTAGAAGG--ATACATGAGAATATCAGTAGTGAACATTCCTCTTCAATAAACTATGTATCTTTTTCTTTATACTTTTCATTAAGCATCATGTTTTCCTTTT------------GAAAGACTGCTTTTT-TAAGATGCTACCTAAAGGATATATACGGagagtaa-acaatagtttatcattcaaagtgggacactt-tgagggagaaaggggtcatttattaataattatgcaaagataataggttt-aaaccggggctatcct-ggataagccaggacatacggtcactcta i macFas5.chr10 C 0 I 4 s papAnu2.chr10 76272928 399 + 90941950 ------------------------tttgaaaaa-aacaagTTCTTAATCACTAAAAATTTCTAGCAGAGAA-TGCAAGGT--CAAGAATACAGGGGGTTGAACTAGGTGACC---ATTTTGGGTTATGTTTTAAGGTTCTATATGAGAAAATAAGACTAGAAGG--ATACATGAGAATATCAGTAGTGAACATTCCTCTTCAATAAACtatgtatctttttctttatacttttcattaagcatcatgttttcctttt------------gaaagactgcttttt-tAAGATGCTACCTAAAGGATATATACGGAGAGTAA-ACAATAGTTTATCATTCAAACTGGGACACTT-TGAGGGAGAAAGGGgtcatttattaataattatgcgAAGATAATAGGTTT-AAACCGGGGCTATCCT-GGATAAGCCAGGACATACGGTCACTCTA i papAnu2.chr10 C 0 M 1213 s chlSab2.chr19 18542716 400 + 33263144 ------------------------TTTGAAAAA-AACAAGTTCTTAATCACTAAAAATTTCTAACAGAGAA-TGCACGGT--CAAGAATACAGGGGGTTGAACTAGGTGACC---ATTTTGGGTTATGTTTTAAGGTTCTATATGAGAAAATAAGACTAGAAGG--ATACATGAGAATATCAGTAGTGAACATTCCTCTTCAATAAACTATGTATCTTTTTCTTTATACTTTTCATTAAGCATCATGTTTTCCTTTT------------GAAAGACTGCTTTTT-TAAGATGCTACCCAAAGGATATATACAGagagtaa-acaatagtttatcattcaaactgggatacttaagagggagaaagaggtcatttattaataattatgcgaagataataggttt-aaactggggctatcct-ggataagccaggacatacggtcactcta i chlSab2.chr19 C 0 I 4 s calJac3.chr1 198246505 396 + 210400635 ------------------------TTTGAAAAC-AACAAGTTCTCAATCACTGAAAATTTCTAGCAGAGAA-TGCAAGGT--CAAGAATACAGGGGGATGAACTAGGTGACC---ATTTTAGGTTATGCTTTAAGATTCTATATGAGAAAAT-AGACTAGAAGG--ATACATGAGA--ATCCGTAGTGAACATTTCTCTTTAATAAACTATGTATTTTTTTCTTTATACTTTTCATTAAGCATCATGTTTTCCTTTT------------GAAAGAGTGC-TCTT-TAAGCTGATACCCAAAGGATATATAAGGAGAGTAA-ACAATAGTATATCATTCAAACTGGTACACTC-TCAGGGCAGAAGGGGTCATTTATTAATAATTATGCTAAGATAATAGGTATAAAATTGGGGCTATCCC-AGATAAGCCTGGATATAAGGTCACTCTA i calJac3.chr1 C 0 C 0 s mm10.chr15 77110673 353 + 104043685 ------------------------TCAGGAGA-----AGGTCCTCGGGCATGGGATGCTGCTAGCACAAAC-AACTAGAGCACAAGGATCCTGGGCCTAAAGGGCAGCCATC---ACTCAAGAGT---TCTGAAGAGTCTGTGAGAC---GCCAGGGTGGGAAT--AAAAATCAGA--CTCACGGGTGGGCA---CCCTCTGGTACGTT-TG---CTTTTGACTTCTACTTCTCATTAAGAACC-TGCTTTTCCTCT------------AAAAAGATACTTT----------------AAAGAACCTACAAGGAGAGTAATACTGTAGTTTATTATTTCAA-TGAAACATCT-TAAGGAAGATGGG-------TATTACAGATAGCTGTAAGATAACAGGAAT-AAACTTGGGCTAATCTAAAATAAATCATCATCTA-------TCTA i mm10.chr15 C 0 C 0 s canFam3.chr10 40870534 398 - 69331447 tttaaataagaacGTAAAAAAGATTTTGAAAAGCAATGAGTTTTTAGTCACTAAAAGTATTTAGCAGAGAATTGTGAAGT--CAAG-----------TTGAACTAGGTAACCATTATTTAGAATTCTGTTT---GAGTCTATGTTTGAAAA-AATACTGGAAGGGAATACATGAGAGTATTAGTG----ACTATGTTCATTAATGAACTATTTTATGCTTTTTTTGGTCTCGTCATTGAAAAACACGCTTCTCTTTTATAATGGTTTGGAAAAGGGTGCTTTTTAAAAGTTGTTACTCAAAGAATCTGTAAGGAGAGGGGCAATACAATTTATTGTTCAAACTGGAACAATT-ATAGGGAGGAAGGGGAC----ATTAATAATTATGCCAAGAAGAAAGCTAC-AAACTGGGACTATTCT-------ACCAA----------------- i canFam3.chr10 I 282 C 0 a score=622623.000000 s hg38.chr22_KI270876v1_alt 95270 220 + 263666 GGCATTATCT---TATTATTTGTGTTAATA-ATCTGTCATTACTGGTGAAATCTGGAGAATTAACAAAGCTACATA-AACTCATATAATAATTTTCTAGGTTCTATATGAATAAATTAG-TTAATTTTTTGG--CAGGAATACCACTTTCCATCATATATCTTAATAGTACATTTTTAAAAGCC-TAGTCTATCTCTGTTTCAGTTAATCAAAGAAACTTAGATACAGG s panTro4.chr22 34473220 220 + 49737984 GGCATTATCT---TATTATTTGTGTTAATA-ATCTGTCATTACTGGTGAAATTTGGAGAATTAACAAAGCTACATA-AACTCATATAATAATTTTCTAGGTTCTGTATGAATAAATTAG-TAAATTTTTTGG--CAGGAATACCACTTTCCATCATATATCTTAATAGTACATTTTCAAAAGCC-TAGTCTATCTCTGTTTCAGTTAATCAAAGAAACTTAGATACAGG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30889249 220 + 46535552 GGCATTATCT---TATTATTTGTGTTAATA-ATCTGTCATTATTGGTGAAATCTGGAGAATTAATAAAGCTACATA-AACTCATATAATAATTTTCTAGGTTCTATTTGAATAAATTAG-TTAATTTTTTGG--CAGGAGTACCATTTTCCATCATATATCTTAATAGTATATTTTCAAAAGCC-TAGTCTATCTCTGTTTCAGTTAATCAAAGAAACTTAGATACAGG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100441901 220 - 115148730 GGCATTATCT---TATTATTTGTGTTAATA-ATCTGTCGTTACTGGTGAAATCTGGAGAATTAATAAAGCTACATA-AACTCATATAATAATTTTCTAGGTTCTATTTGAATAAATTAG-TTAGTTTTTTGG--CAGGAGTACCATTTTCCATCATATATCTTAATAGTACATTTTCAAAAGCC-TAGTCTATCTCTGTTTCAGTGAATCAAAGAAACTTAGATACAGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80589433 220 + 95678458 GGCATGATCT---TATTATTTGTGTTAATA-ATCTTTCATTACTGGTGAAACTTGGAGAATTAATAAAGCTACATA-AACTCATATAATAATTTTCTAAGTTCTATTTGAATAAATTGG-TTAATTTTTTGG--CAGGAGTACAATTTTCCATCCTATATCTTAATAGTACATTTTCAAAAGGC-TAGTCTATCTCTGTTTCAGTTAATCAAAGAAACTTAGATACAGG i rheMac3.chr10 I 4 I 251 s macFas5.chr10 81016247 220 - 96509753 GGCATGATCT---TATTATTTGTGTTAATA-ATCTTTCATTACTGGTGAAACTTGGAGAATTAATAAAGCTACATA-AACTCATATAATAATTTTCTAAGTTCTATTTGAATAAATTGG-TTAATTTTTTGG--CAGGAGTACAATTTTCCATCCTATATCTTAATAGTACATTTTCAAAAGGC-TAGTCTATCTCTGTTTCAGTTAATCAAAGAAACTTAGATACAGG i macFas5.chr10 I 4 I 251 s chlSab2.chr19 18543120 220 + 33263144 AGCATGATCT---TATTATTTGTGTTAATA-ATCTTTCATTACTGGTGAAACTTGGAGAATTAATAAAGCTACATA-AACTCATATAATAATTTTCTAAGTTCTATTTGAATAAATTGG-TTAATTTTTTGG--CAGGAGTACAATTTTCCATCCTATATCTTAATAGTACATTTTCAAAAGGC-TAGTCTATCTCTGTTTCAGTTAATCAAGGAAACTTAGATACAGG i chlSab2.chr19 I 4 I 247 s calJac3.chr1 198246901 215 + 210400635 GGCA-----T---TATTATTTGCATTAATA-ATCTGTCATTACCGGTGAAATTTGGAGAAATAGTAAAGCTATATT-AACTCATATAGTAATTTTCTAGATTCTGTTTGAATAAATTAG-TTAATTTTTTGG--CAGGAGTACCATTTTCCATCATATATCTTAATAGTGCATTTTCAAAAGGC-TAGCCTATCTCTGTTTCAGTTAATCAAAGAAACTTAGATACAGG i calJac3.chr1 C 0 C 0 s mm10.chr15 77111026 210 + 104043685 --GGTTACCT---CATGA-TTATGTTAACA-TCCTGCTGCTCCCAGTGAAACCT-GAGACTCCAGAAAGCTATGTGTACCTCACAC-TCACTTGTCTAGATCCCCGTTGGGGAAATGAG-CTCTTTTTTAGGGACAGGAGTA-----TTC--TCATATATTTGATTTACACATTTTTAAAAGGCAAAGACTATCTTTGTTTCAGCTGCTCAGA-ATTTTTAGACACAG- i mm10.chr15 C 0 C 0 s canFam3.chr10 40870932 222 - 69331447 TATATTACCTTTCTATTGTTTATAATAATACCTTTGTTATGACTGGTGACATCTGGAGAATCC---AAGTTATACC-TATCAGTATTATCATTTTCTAGGTTCTATTTGAGTATATTAGTTTAATTTTTTGA--CAGGGGTAGCATTTTTCATCACACATCTTAATTGCATATTTTCAAAAGGA-TAGTCTACCTTTGTTTTAGTTAATCCTAGTAAATTAGATAGGAC i canFam3.chr10 C 0 C 0 e papAnu2.chr10 76273327 1213 + 90941950 M a score=117399.000000 s hg38.chr22_KI270876v1_alt 95490 37 + 263666 TGATTCTATGTTTTTATAAAGGATTAGGGAGTAAAAA s panTro4.chr22 34473440 37 + 49737984 TGATTCTATGTTTTTATAAAGGATTAGGGAGTAAAAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30889469 37 + 46535552 TGATTCTATGTTTTTATAAAGGATTAGGGAGTAAAAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100442121 37 - 115148730 TGATTCTATGTTTTTATAAAGGATTAGGGAGTAAAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80589904 37 + 95678458 TGATTCTATGTTTTTACAAAGGATTAGGGAGTAAAAA i rheMac3.chr10 I 251 C 0 s macFas5.chr10 81016718 37 - 96509753 TGATTCTATGTTTTTACAAAGGATTAGGGAGTAAAAA i macFas5.chr10 I 251 C 0 s chlSab2.chr19 18543587 37 + 33263144 TGATTCTATGTTTTTACAAAGGATGAGGGAGTAAAAA i chlSab2.chr19 I 247 C 0 s calJac3.chr1 198247116 37 + 210400635 TGATTCTATTTTTTTACAAAAGATTAGGGAGTAAAAA i calJac3.chr1 C 0 C 0 s mm10.chr15 77111236 27 + 104043685 -------CTGTTTTTATAGAGA---AAAGAATAAAAG i mm10.chr15 C 0 C 0 s canFam3.chr10 40871154 37 - 69331447 TGACTTTATGTTTTTACAAAGGAGTATGAAGtaaaaa i canFam3.chr10 C 0 I 182 e papAnu2.chr10 76273327 1213 + 90941950 M a score=190032.000000 s hg38.chr22_KI270876v1_alt 95527 75 + 263666 GACTA--------------------------AAATTCACATGAAATAATTTAAATATATATGTATGCACGTGTGTGCACAAATATGATATATATTCATTCT s panTro4.chr22 34473477 75 + 49737984 GACTA--------------------------AAATTCACGTGAAATAATTTAAATATATATGTATGCATGTGTGTGCACAAATATGATATATATTCATTCT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30889506 74 + 46535552 GACTA--------------------------AAATTCATGTGAAATAATTTAAACATATATGTATGTATGTGTGTGCACAAATATGATATATATT-ATTCT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100442158 75 - 115148730 GACTG--------------------------AAATTCACGTGAAATAATTTAAATATATATGTATGCATGTGTGTGCACAAATATGATATATATTCATTCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80589941 75 + 95678458 GACTA--------------------------AAATTCACATGAAATAATTTAAACATATATGTATGCATGTGTGTGCACAAATATGATATATATTCATTCC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81016755 75 - 96509753 GACTA--------------------------AAATTCACATGAAATAATTTAAACATATATGTATGCATGTGTGTGCACAAATATGATATATATTCATTCC i macFas5.chr10 C 0 C 0 s chlSab2.chr19 18543624 75 + 33263144 GACTA--------------------------AAATTCACATGAAATAATTTCAACATATGTGTATGCATGTGTGTGCACAAATATGGTATATATTCATTCC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198247153 75 + 210400635 GACCA--------------------------CAATTCACATGAAATAATTAAAATATATATGTATGCATGCGTGTACATGAATATGATATATATTCATTCT i calJac3.chr1 C 0 C 0 s mm10.chr15 77111263 48 + 104043685 GACAAT-------------------------CAACTCACACGGAGTAATTTAAG-------------------------AAATACTATGT---CACAGCCT i mm10.chr15 C 0 I 3 s canFam3.chr10 40871373 100 - 69331447 gactatcataaataaataaaaatttaaaaaaaaaaTCACATGAAAT-GTTTAAGTATATATTTTTGCATTTATATGAATATAAATGATATACATTCATTCC i canFam3.chr10 I 182 C 0 e papAnu2.chr10 76273327 1213 + 90941950 M a score=653162.000000 s hg38.chr22_KI270876v1_alt 95602 204 + 263666 ATAATCTAAGTAAGCCAAATCTAGAATATGAAGGCAAAAGAAGGAAAAAAGGAAAAAACTA-----GTCAACAACTAAGAAAAAACTAC--TATAGAGTA-ATTCTACTTTAAAGGCAAGCTGGAAAAAGAAGAATACTGGCAGAC--AAGGAGGGCATGAGCATGGCAGTGGAACACCGTTTACTTATGTTTTCAAATGG---GTATATCCTAAAA s panTro4.chr22 34473552 204 + 49737984 ATAATCTAAGTAAGCCAAATCTAGAATATGAAGGCAAAAGAAGGAAAAAAGGAAAAAACTA-----GTCAACAACTAAGAAAAAACTAC--TATAGAGTA-ATTCTACTCTAAAGGCAAGCTGGAAAAAGAAGAATACTGGCAGAC--AAGGAGGGCATGAGCATGGCAGTGGAACACCGTTTACTTATGTTTTCAAATGG---GTATATCCTAAAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30889580 204 + 46535552 ATAATCTAAGTAAGCCAAACCTAGAATATGAAGGTAAAAGAAGGAAAAAAGGAAAAAACTA-----GTCAACAACAAAGAAAAAACTAC--TATAGAGTA-ATTCTACTCTAAAGGCAAGCTGGAAAAAGAAGAATACTGGCAGAC--AAGGAGGGCATGAGTATGGCAGTGGAACACCATTTACTTATGTTTTCAAATGG---GTATATCCTAAAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100442233 204 - 115148730 ATAATCTAAGTAAGCCAAATCTAGAATATGAAGGCAAAAGAAGGAAAAAAGGAAAAAACTA-----GTCAACAACAAAGAAAAAACTAC--TATGGAGTA-ATTCCACTCTAAAGGCAAGCTGGAAAAAGAATAATACTGGCAGAC--AAGGAGGGCATGAGCATGGCAGTGGAACACCATTTACTTATGTTTTCAAATGG---GTATATCCTAAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80590016 203 + 95678458 ATAATCTAAGTAAACCAAATCTAGAATATGAAGGTAAAAGAAGGAAAAAAGG-AAAAACTA-----GTCAACAACAAAGAAAAAACTAC--TATAGAGTA-ATTCTACTCTAAAGGCAAGCTGGAAAAAGAAGAATACTGGCAGAC--AAGGAGGCTGTGATCATGGCAGTGGAACACCGTCTACTCATGTTTTCAAATGG---GTATATTCTAAAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81016830 206 - 96509753 ATAATCTAAGTAAACCAAATCTAGAATATGAAGGTAAAAGAAGGAAAAAAGG-AAAAACTA-----GTCAACAACAAAGAAAAAACTAC--TATAGAGTA-ATTCTACTCTAAAGGCAAGCTGGAAAAAGAAGAATACTGGCAGAC--AAGGAGGCTGTGATCATGGCAGTGGAACACCGTCTACTCATGTTTTCAAATGGTATGTATATTCTAAAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76274547 204 + 90941950 ataatctaagtaaaccaaatctagaatatgaaggtaaaagaaggaaaaaaggaaaaaacta-----gtcaacaacaaagaaaaaactac--tATAGAGTA-ATTCTACTCTAAAGGCAAGCTGGAAAAAGAAGAATACTGGCAGAC--AAGGAGGCTGTGATCATGGCAGTGGAACACCGTCTACTCATGTTTTCAAATGG---GTATATTCTAAAA i papAnu2.chr10 M 1213 C 0 s chlSab2.chr19 18543699 204 + 33263144 ATAATCTAAGTAAACCAAATCTAGAATATGAAGGTAAAAGAAGGAAAAAAGGAAAAAACTA-----GTCAACAACAAAGAAAAAACTAC--TATAGAGTA-ATTCTACTCTAAAGGCAAGCTGGAAAAAGAAGAATACTGGCAGAC--AAGGAGGCTGTGAGCATGGCAGTGGAACACTGTCTACTTATGTTTTCAAATGG---GTATATTCTAAAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198247228 208 + 210400635 ATAATCTAGGTAAGCCAAATCTAGAATATGAAGGTagaagaa-gaaaaaagaaaaaaataaaaaaggtcaacaacaaagaaaaaaCGAC--TATAGAGTA-ATTCTGCTTTAAACACAAGCTGGAAAAAGAAAAATACTGGCAAAT--AAGGAGGGCGTGAGCATGGCAGTGGAACACTGTTTACTTATGTTTTCAAATGG---GTATATTCTATAA i calJac3.chr1 C 0 C 0 s mm10.chr15 77111314 166 + 104043685 ATCCTTTGCATAATTCAAA--------------GGACAGGCAAAGCAAAAGGCAA----CA-----GTCAAACAGGAGGCCATCAGTGCTTTGTGGAGTACAGTGAACTCCACAGG-AAGTTCTAGGGAGGATGAGCC-------------GAGGGT---------GCAG-AGAGCACTGCTCAC-CATCTTTCCAAATGA---ACTCACTCTAAAG i mm10.chr15 I 3 I 83 s canFam3.chr10 40871473 169 - 69331447 ATAACCTAGGAAAACCAAATCTAG-ATATGAAGGTCAAAGAAGAAAAAAGGAAGA----TA-----CTCAACA----------------------------ATT---TTTTCAGGCCAAGCTG----AAAAAGAATACCAGCAAAATGATGGGGGAGATGGGCAAGGCAGCATGACAGTGTTCACTTATGTTTTTAAGTGG---GTATGTTCTAAAG i canFam3.chr10 C 0 C 0 a score=136380.000000 s hg38.chr22_KI270876v1_alt 95806 45 + 263666 CCCTGGG-TGATGGTCTTATTATACAAAATAAGATATGGTATGGAG s panTro4.chr22 34473756 45 + 49737984 CCCTGGG-TGATGGTCTTATTATACAAAATAAGATATGGTATGGAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30889784 45 + 46535552 CCCTGGG-TGACGGCCTTATTATACAAAACAAGATATGGTATGGAG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100442437 45 - 115148730 CCCTGGG-TGACGGTCTTATTATACAAAATAAGATATGGTATGGAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80590219 45 + 95678458 CCCTGGG-TGATGGTCTTATTATACAAAATAAGATACGGGAAGGAG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81017036 45 - 96509753 CCCTGGG-TGATGGTCTTATTATACAAAATAAGATACGGGAAGGAG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76274751 45 + 90941950 CCCTGGG-TGATAGTCTTATTATACAAAATAAGATACGGGAAggag i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18543903 44 + 33263144 CCCTGGG-TGATGGTCTTATGATACAAAATAAGATA-GGTAAGGAG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198247436 45 + 210400635 CCCTGGG-TGACAGTCCTATTATATAAAATAAGATATGGTAAAGAG i calJac3.chr1 C 0 C 0 s canFam3.chr10 40871642 43 - 69331447 CCATAGGCTGACAGTC---TCCTAAAAAAGAAGACAATGTAAAGAG i canFam3.chr10 C 0 C 0 e mm10.chr15 77111480 83 + 104043685 I a score=919723.000000 s hg38.chr22_KI270876v1_alt 95851 256 + 263666 TTGCTTTTTGCTTTGGAACAATTTGATTA---AAC-------------CCTGTTTTACA-TTAAGTATTG----CTATCT-TAGAGTTATTTTGTGACTAGTTTT-TCCATTACTGCTCTAAAA--AAATTCAATAAAGCTAATTTCTGTACAGAAAAGCACTCTGTTTAAAAGTTAGAG--GAACTCTTAGCTAAACAATAGGACTAT-ATAAAGCCTCCTTTTCTCTGGTTATTTTCAAAATACGCTGTAATTTTACAGTCAACCCCAAACATATAAAA-GGA s panTro4.chr22 34473801 256 + 49737984 TTGCTTTTTGCTTTGGAACAATTTGATTA---AAC-------------CCTGTTTTACA-TTAAGTATTG----CTATCT-TAGAGTTATTTTGTGACTAGTTTT-TCCATTACTGCTCTAAAA--AAATTCAATAAAGCTAATTTCTGTACAGAAAAGCACTCTGTTTAAAAGTTAGAG--GAACTCTTAACTAAACAATAGGACTAT-ATAAAGCCTCCTTTTCTCTGGTTCTTTTCAAAATACGCTGTAATTTTACAGTCAACCCCAAACATATAAAA-GGA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30889829 257 + 46535552 TTGCTTTTAGCTTTGGAACAATTTGATTA---AAC-------------CCTGTTTTACATTTAAGTATTG----CTATCT-TAGAGTTATTTTGTGACCAGTTTT-TCCATTACTGCTCTAAAA--AAATTCAATAAAGCTAATTTCTGTACAGAAAAGCACTCTGTTTAAAAGTTAGAG--GAACTCTTAACTAAACAATAGGACTAT-ATAAAGCCTCCTTTTCTCTGGTTCTTTTCAAAATACGCTGTAATTTTACAGTCAACCCCAAACATATAAAA-GGA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100442482 258 - 115148730 TTGCTTTTTGCTTTGGAACAATTTGATTA---AAC-------------ACTGTTTTACATTTAAGTATTG----CTATCT-TAGAGTTATTTTGTGACTAGTTTT-TCCATTACTGCTCTAAAA--AAATTCAATAAAGCTAATTTCTGTACAGAAAAGTACTCTGTTTAAAAGTTAGAG--GAACTCTTAACTAAACAATAGGACTAT-ATAAAGCCTCCTTTTCTCTGGTTCTTTTCAAAATACGCTGTAATTTTACAGTCAACCCCAAACATATAAAAGGGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80590264 257 + 95678458 TTGCTTTTTGTTTTGGAACAATTTGATTA---AAC-------------ACGGTTTTACATGTAAGTATTG----CTATCT-TAGAGTTATTTTGTGACGAGTTTT-TCCATTACTGCTCTAAAA--AAATTCAATAAAGCTAATTTCTGTACAGAAAAGCACTCTGTTTGAAAGTTAGAG--GAGCTCTTCACTACACAACAGGACTAT-ATAAAGCCTCCTTTTCTCTGGTTATTTTCAAAATATTCTGTAATTTTACAGTCAACCTCAAACATATAAAA-GGA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81017081 257 - 96509753 TTGCTTTTTGTTTTGGAACAATTTGATTA---AAC-------------ACAGTTTTACATGTAAGTATTG----CTATCT-TAGAGTTATTTTGTGACGAGTTTT-TCCATTACTGCTCTAAAA--AAATTCAATAAAGCTAATTTCTGTACAGAAAAGCACTCTGTTTGAAAGTTAGAG--GAGCTCTTCACTACACAACAGGACTAT-ATAAAGCCTCCTTTTCTCTGGTTATTTTCAAAATATTCTGTAATTTTACAGTCAACCTCAAACATATAAAA-GGA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76274796 257 + 90941950 ttgctttttgttttggaaCAACTTGATTA---AAC-------------ACggttttacatgtaagtattG----CTATCT-TAGAGTTATTTTGTGACGAGTTTT-TCCATTACTGCtctaaaa--aaattcaataaagctAATTTCTGTACAGAAAAGCACTCTGTTTAAAAGTTAGAG--GAGCTCTTCACTACACAACAGGACTAT-ATAAAGCCTCCTTTTCTCtggttattttcaaaatattctgtaattttacAGTCAACCTCAAACATATAAAA-GGA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18543947 257 + 33263144 TTGCTTTTTGTTTTGGAACAATTTGATTA---AAC-------------ACGGTTTTACATGTAAGTATTG----CTATCT-TAGAGTGATTTTGTGACGAGTTCT-TCCATTACTGCTCTAAAA--AAATTCAATAAAGCTAATTTCTGTACAGAAAAGCAATCTGTTTAAAAGTTAGAG--GAGCTCTTCACTACACAATAGGACTAT-ATAAAGCCTCCTTTTCTCTGGTTATTTTCAAAATATTCTGTAATTTTACAGTCAACCTCAAACATATAAAA-GGA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198247481 241 + 210400635 TTGCTTTTTGTTTTGGAACAATTTGATTA---AAC-------------ATTGTTTTACATGTAAGTATTG----CTATCTAAAGAGTTATTTTGTGACTAGTTTT------------TCTAAAA--AAATTCAATAAAGCTAATTTATGTATAGAAAAGCACTC--TTTAAAAGTTAGAG--CAACTCT----TAAACAATAAAACCAT-ATAAAGCCTCCTTTTCTCTGGTTCTTTTCAAAATACGCTGTAATTTTACAATCAATCCCAAACGTATAAAA-GGA i calJac3.chr1 C 0 C 0 s mm10.chr15 77111563 236 + 104043685 TAATTTTCCCCTCTAGGATAATTTGGTTG---AAC-------------ACTGATTTACACGTCACCACTATCACTTATGT-CAGACTTA-TTTATGACTAATTTTTTTCATTACTACCT--AAA--AATTTTAATAAAGCTAAATTCTGTATATAAAAGTACTCTGTTTAAAAGCCAGGGCAGGGCAATTGCTAAAACCTCAGTACCACAATAAAG--TCCTT------------------------CTGAAATTTTATAGTCAACTCCAAATATATAAAA-GAG i mm10.chr15 I 83 I 208 s canFam3.chr10 40871685 267 - 69331447 TTGCTTTTTGTTTTGGAGCCATGTGATTATTTAACTGTTCTATTGATAATTGTTTTATATGTAAGTATCA----CTTTTT-CAGAATTATTTTGTGACTCATTTT-TCCATTACTGGTTCAAAAATAAATTCAACAAAGCTAATTTCTATACAGAAAAGCACTCAG-TTAAAAGACTGAG--CAGCGCTAAAGTGAACAATACAACCA--GTAAG----TCTCATCTCTGGTTCCTTTCAAGACACGCTGTAATATTATAGTCAACCACAAACATAAAAGA-A-- i canFam3.chr10 C 0 C 0 a score=338657.000000 s hg38.chr22_KI270876v1_alt 96107 98 + 263666 TTAAGAAACTAAACTTAATTCACAAAAC-AAAAAGTGCTCATTAATTTCTCTTAGGTGGATCCCAGAGGAGGCATCCATGGGTTTGA-TTCCAAAATAAA s panTro4.chr22 34474057 98 + 49737984 TTAAGAAACTAAACTTAATTCACAAAAC-AAAAAGTGCTCATTAATTTCTCTTAGGTGGATCCCAGAGGAGGCATCTATGGGTTTGA-TTCCAAAATAAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30890086 98 + 46535552 TTAAGAAACTAAACTTAATTCGCAAAAC-AAAAAGTGCTCATTAATTTCTTTTAGGTGGATCCCAGAGGAGGCATCTATGGGTTTGA-TTCCAAAATAAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100442740 98 - 115148730 TTAAGAAACTAAACTTAATTCGCAAAAC-AAAAAGTGCTCATTAATTTCTCTTAGGTGGATCCCAGAGGAGGCATCTATGGGTTTGA-TTCCAAAATAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80590521 98 + 95678458 ATAGGACACTAAACTTAATTCACAAAAC-AGAAACTGCTCATTAATTTATCTTAGGTGGATCCCAGAGGAGGCATCCATGGGTTTGA-TTCCAAAGTAAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81017338 99 - 96509753 ATAGGACACTAAACTTAATTCACAAAAC-AGAAACTGCTCATTAATTTATCTTAGGTGGATCCCAGAGGAGGCATCCATGGGTTTGATTTCCAAAGTAAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76275053 98 + 90941950 ATAGGACACTAAACTtaattcacaaaac-aaaaactgctcATTAATTTATCTTAGGTGGATCCCAGAGGAGGCATCCATGGGTTTGA-TTCCAAAGTAAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18544204 98 + 33263144 ATAGGACACTAAACTTAATTCACAAAAC-AAAAACTGCTCATTAATTTATCTTAGGTGGATCCCAGAGGAGGCATCCATGGGTTTGA-TTCCAAAGTAAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198247722 99 + 210400635 ATAAGAAACTAAACTTAATTCATAAAATGAAAAAGTGCTCATTAATTTATCTTAGGTAGATCCCAGAGGAGGCATCTATGTGTTCGA-TTCCAAAATAAA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40871952 97 - 69331447 ATGAGAAAATAAACTTAATTTACTAAAA-GAAAAGTACTCTTTAATTTATGTGAGGTGGATCCCAGAAGAGGTACCCA-GGTTTTGA-CTCCAAAATAAA i canFam3.chr10 C 0 C 0 e mm10.chr15 77111799 208 + 104043685 I a score=1010382.000000 s hg38.chr22_KI270876v1_alt 96205 279 + 263666 TCTCTATTAG--GAGCCT----CAGAACAGTTCCAAGGGCACCCATTCCAGCAAATAACTTTAGGTAGCAGTTAAGAAAGCTTCAAAGGACAAAAACAAGGTTTT-GTATCAGTCCTTGAAGGCAGATTCAGGGCAATTCTGAATTCTATGCTTTGTTTTTAAAACATTTACCAATTAGTACACAGTCTGTGCACCCTTTAGCAGCCCAAAGAAAAATGGGGCAGTGAGGACACAGCATCAAGCTGACAGAAGCAGCCTATGCTTTTAGATTTCTCAAAGAGAAAG------ s panTro4.chr22 34474155 279 + 49737984 TCTCTATTAG--GATCCT----CAGAACAGTTCCAAGGGCACCCATTCCAGCAAATAACTTTAGGTAGCAGTTAAGAAAGCTTCGAAGGACAAAAACAAGGTTTT-GTGTCAGTCCTTGAAGGCAGATTCAGGGCAATTCTGAATTCTGTGCTTTGTTTTTAAAATATTTACCAATTAGTACACAGTCTGTGCACCTTTTAGCAGCCCAAAGAAAAATGGGGCAGTGAGGACACAGCATCAAGCTGACAGAAGCAGCCTATGCTTTTAGATTTCTCAAAGAGAAAG------ i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30890184 279 + 46535552 TCTCTATTAG--GAGCCT----CAGAACAGTTCCAAGGGCACCCATTCCAGCAAATAACTTTAGGTAGCAGTTAAGAAAGCTTCGAAGGACAAAAACGAGGTTTT-GTATCAGTCCTTGAAGGCAGATTTAGGGCAATTCTGAATTCTGTGCTTTGTTTTTAAAACATTTACCAATTAGTACACAGTCTGTGCACCCTTTAGCAGCCCAAAGAAAAATGGGGCAGTGAGGACACAGCATCAAGCTGACAGAAGCAGCCCATGCTTTTAGATTTCTCAAAGAGAAAG------ i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100442838 279 - 115148730 TCTCTATTAG--GAGCCT----CAGAACAGTTCCAAGGGCATCCATTCCAGCAAATAACTTTAGGTAGCAGTTAAGAAAGCTTTGAAGGACAAAAACAAGGTTTT-GTATCAGTCCTTGAAGGCAGATTCAGGGCAATTCTGAATTCTGTGCTTTGTTTTTAAAACATTTACCAATTAGTACACAGTCTATGCACCCTTTAGCAGCCCAGAGAAAAATAGGGCAGTGAGGACACAGCATCAAGCTGACAGAAGAAGCCTATGCTTTTAGATTTCTCAAAGAGAAAG------ i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80590619 277 + 95678458 TCTCTATTAG--GAGCCT----CAGAACAGTTCCAAGGGCACCCATTCCAGCAAAGAACTTTAGGTAGCAGTTAAGAAAGCTCTGAAGGACAAAAACAAGGTTTT--TATCAGTCCTTGAAGGCAGATTCAGGGCAATTCTGAATTCTGTGCTTTGTTTTTAAAACATTTACCAATCAGTACAGAGTCTGTGAACCCTTTAGCAGCCCAAAGAAAAATGGGGCAGTGAGGATACAGCATCAAGCTGACAGAAGCAGCCTATGCTTTTAGATTTCCC-AAAAGAAAG------ i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81017437 277 - 96509753 TCTCTATTAG--GAGCCT----CAGAACAGTTCCAAGGGCACCCATTCCAGCAAAGAACTTTAGGTAGCAGTTAAGAAAGCTCTGAAGGACAAAAACAAGGTTTT--TATCAGTCCTTGAAGGCAGATTCAGGGCAATTTTGAATTCTGTGCTTTGTTTTTAAAACATTTACCAATCAGTACAGAGTCTGTGAACCCTTTAGCAGCCCAAAGAAAAATGGGGCAGTGAGGATACAGCATCAAGCTGACAGAAGCAGCCTATGCTTTTAGATTTCCC-AAAAGAAAG------ i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76275151 277 + 90941950 TCTCTATTAG--GAGCCT----CAGAACAGTTCCAAGGGCACCCATTCCAGCAAAGAACTTCAGGTAGCAGTTAAGAAAGCTCTGAAGGACAAAAACAAGGTTTT--TATCAGTCCTTGAAGGCAGATTCAGGGCAATTCTGAATTctgtgctttgtttttaaaacatttaccaaTCAGTACAGAGTCTGTGAACCCTTTAGCAGCCCAAAGAAAAATGGGGCAGTGAGGATACAGCATCAAGCTGACAGAAGCAGCCTATGCTTTTAGATTTCCC-AAAAGAAAG------ i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18544302 278 + 33263144 TCTCTATTAG--GAGCCT----CAGAACAGTTCCAAGGGCATCCATTCCAGCAAAGAACTTTAGGTAGCAGTTAAGAAAGCTTTGAAGGACAAAAACAAAATTTT--TATCAGTCCTTGAAGGCAGAATCAGGGCAATTCTGAATTCTGTGCTTTGTTTTTAAAACATTTACCAATTAGTACAGAGTCTGTGAACCCTTTAGCAGCCCAAAGAAAAATGGGGCAGTGAGGATACAGCATCAAGCTGACAGAAGCAGCCTATGCTTTTAGATTTCCCAAAAAGAAAG------ i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198247821 279 + 210400635 TCTCTATTAG--GAGCCT----CAGAAGAATTCCACGGGCACCCATTCCAGGAAAGAACTTTAGGAAGCAGTTAAGAAAGCTTGGAAGGACGAAAACAAGGTTTT-GTATCAGTCCTTGAGGGCAGATTCAGGGCAATTCTTAATTCTGTGCTTTGTTTTTAAAACATTTACCAATTAGTACCTAGTCTGTGCACCCTTTAGCAGCCCAAAGAAAAATGGGGCAGTGAGGACACAGCATCAAGCTGACAGAAGCAGCCTATGCTTTTAGATTACCCAAAGAGAAAG------ i calJac3.chr1 C 0 C 0 s mm10.chr15 77112007 270 + 104043685 TTCCTTTTAGTTGGATCC----CAAAGGAGACATTAGGGATCTGACTCCACAATCACATTTTGGAAAGCTTTGGAGTCGGGTTCAAAGGTCCCATGCAGGGTTG---TCCCTGCCCTTGA-TGCAGGTCGAGGGTGATTCTGAATTCTCTGCTTCACTCTGGATACACCTGACAGTTAG--CCGTGTCTATACTGCCACTG-----CCAAAGACAGCAGGGGCAGCGAAGACGCTGCTTGGAGCT-ACAGAGGCAACACACAGCTTTAGAGTCCTCAGGGGGGAAA------ i mm10.chr15 I 208 C 0 s canFam3.chr10 40872049 280 - 69331447 CCTCTGTTAA-TGAGGTTAATGCAGAACAGTTTGA--GGAACCCATTCCAGCAAAGAACTTTAGGTGACAGTTAAGGAGGACACAAGG--TGAAGACAGATTTTTTTTATCAGTCCTTGAAGGCAGATCCA-GGCAATTCTGAATTCTGTGCTTTA-----AGAACAGCTACCAATCAGTACATCGTTTATCTACTCTTTTGCAGCCCGAACTAAAA-GAGGCAGTGAGGACACAGCATTATACTGAGGGGAGCGGCATATGCTTTTAGAGTCCCCAAAGAGAAAAGGAAGG i canFam3.chr10 C 0 C 0 a score=201888.000000 s hg38.chr22_KI270876v1_alt 96484 66 + 263666 CTCATGTCATTACTTTCAAATG--AGTTACATGAGAGAAGTAATTGGATCAGGTAAATTTAAAAAAAT-- s panTro4.chr22 34474434 68 + 49737984 CTCATGTCATTACTTTCAAATGAAAGTTACATGAGAGAAGTAATTGGATCAGGTAAATTTAAAAAAAT-- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30890463 68 + 46535552 CTCATGTCATCACTTTCAAATGAAAGTTACATGGGAGAAGTAATTGGATCAGGTAAATTTTAAAAAAT-- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100443117 68 - 115148730 CTCATGTCATTACTTTCAAATGAAAGTTACATGGGAGAAGTAATTGGATCAGGTAAATTTAAAAAAAT-- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80590896 68 + 95678458 CTCATGTCATTACTTTCAAATGAAAATTACACGGGAGAAGTAACTGGATGAGGTAAATGTTAAACAAA-- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81017714 68 - 96509753 CTCATGTCATTACTTTCAAATGAAAATTACACGGGAGAAGTAACTGGATGAGGTAAATGTTAAACAAA-- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76275428 68 + 90941950 CTCATGTCATtactttcaaatgaaaattacaCAGGAGAAGTAACTGGATGAGGTAAATGTTAAACAAA-- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18544580 68 + 33263144 CTCATGTCATTGCTTTCAAATGAAAATTACACGGGAGAAGTAACTGGATGAGGTAAATGTTAAACAAA-- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198248100 68 + 210400635 CTCATGTCATTACTTTCAAATGAAAATTACATGGGAGAAGTAATTGGATCAGGTAAATTTTCAAAAAT-- i calJac3.chr1 C 0 C 0 s canFam3.chr10 40872329 65 - 69331447 --CATGT-GTCACTTAAACATGAAAATTACAGGGGAGAAGCAATCTAATTGGGTACA--CTGAGCAATTT i canFam3.chr10 C 0 C 0 e mm10.chr15 77112277 0 + 104043685 C a score=172212.000000 s hg38.chr22_KI270876v1_alt 96550 53 + 263666 GTGGggccaggatgcagtggctcacacctgtaatcccagcactgtgggaagcc s panTro4.chr22 34474502 53 + 49737984 GTGGggccaggatgcggtggctcacacctgtaatcccagcactgtgggaagcc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30890531 53 + 46535552 GTGGggccaggatgcggtggctcacacctataatcccagcactgtgggaagcc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100443185 53 - 115148730 GTGGggccaggatgcggtggctcacacctgtaatcccagtactgtgggaagcc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80590964 53 + 95678458 GTGGggccaggatgcggtggctcacacctgtaatcccagtactgtgggaggcc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81017782 53 - 96509753 GTGGggccaggatgcggtggctcacacctgtaatcccagtactatgggaggcc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76275496 53 + 90941950 GTGGGGCcaggatgcggtggctcacacctgtaatcccagtactgtgggaggcc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18544648 53 + 33263144 GTGGggccaggatgcggtggctcacacctataatcccagtactgtgggaggcc i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198248168 53 + 210400635 GTGGAgccaggatgcagtggctcacacctgtaatcccagcactttgggaggcc i calJac3.chr1 C 0 C 0 e mm10.chr15 77112277 0 + 104043685 C e canFam3.chr10 40872394 0 - 69331447 C a score=442929.000000 s hg38.chr22_KI270876v1_alt 96603 154 + 263666 aaggcaggcagatcacttgagaccaggagtt-tgagaccagcctggccaacatggtgaaactctgtctgtactaaaaataccaaaaattagctaggggtggtagtgtgcgcctgttatcccagctactcgggaagctgaggcacaagaattgctt s panTro4.chr22 34474555 154 + 49737984 aaggcaggcagatcacttgagaccaggagtt-cgagaccagcctggccaacatggtgaaactctgtctgtactaaaaataccaaaaattagctaggggtggtagtgtgcgcctgttatcccagctactcgggaagctgaggcacaagaattgctt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30890584 154 + 46535552 aaggcaggcagatcacttgagaccaggagtt-tgagaacagcctagccaacatggtgaaactttgtctgtactaaaaataccaaaaattagccaggggtggtagtgtgtgcctgttatcccagctactcaggaagttgaggcacaagaattgctt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100443238 153 - 115148730 aaggcaggcagatcacttgagaccaggagtt--aagaccagcctggccaacatggtgcaactctgtctgtactaaaaataccaaaaattagccaggggtggtagtgtgtgcctgttatcccagatactcgggaagctgaggcacaagaattgctt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80591017 154 + 95678458 aaggcaggcagatcatttgagaccaggagtt-tgagaccagcctcgccaacatggtgaaaccctgtctgtactaaaaatatcaaaaattagccaggggtggtagtgcgtgcctgttatcccagctactctggaggctgaggcacaagaatcgctt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81017835 154 - 96509753 aaggcaggcagatcatttgagaccaggagtt-tgagaccagcctggccaacatggtgaaaccctgtctgtactaaaaatatcaaaaattagccaggggtggtagtgcgtgcctgttatcccagctactctggaggctgaggcacaagaatcgctt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76275549 154 + 90941950 aaggcaggcagatcacttgagaccaggagtt-tgagaccagcctggccaacatggtgaaaccctgtctgtactaaaaatatcaaaaattagctaggggtggtagtgcgtgcctgttatcccagctactctggaggctgaggcacaagaatcgctt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18544701 154 + 33263144 aaggcaggcagatcacttgagaccaggagtt-tgagaccagcctggccaacacggtgaaaccctgtctgtactaaaaatatcaaaaattagccaggggtggtagcgcgtgcctgttatcccagctactctggaggctgaggcacaagaatcgctt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198248221 154 + 210400635 aaagcaagcagatca-ttgagaccaggagttttgaaacctgcctagccaacacggcaaaaccctgtctgtactaaaaatacaaaaaactagccgggcatggtggtgtgtgcctgtaatcccagctaatcgggaggctgaggcacaagaatcgctt i calJac3.chr1 C 0 C 0 s mm10.chr15 77112277 56 + 104043685 AAGGCAGGCAGGT------------GCAATT-------------------------------------ATTTTAAAATGA-----------------------------------------AGTTACACGGGA----GAGGT-----AACTGGTT i mm10.chr15 C 0 C 0 e canFam3.chr10 40872394 0 - 69331447 C a score=267060.000000 s hg38.chr22_KI270876v1_alt 96757 110 + 263666 gaacccaggaggcggaggttgcagtgagtcaagactgtgccaatgcaactttagcctgggcaacagagcgagaatctgcctcaaaaaa-----------------------aaaaaaaaaaaaa-agaaaagaa s panTro4.chr22 34474709 111 + 49737984 gaacccaggaggcggaggttgcagtgagtcaagactgtgccaatgcaactttagcctgggcaacagagcgagactctgcctcaaaaaa-----------------------aaaaaaaaaaaaagaaaaaagaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30890738 110 + 46535552 gaacccaggaggcggaggttgcagtgagtcaagactgtgccaatgcaactttagcctgggcaatagagcgagactctgcctcaaaaaa-----------------------aaaaaaaaaaaaa-agaaaagaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100443391 110 - 115148730 gaacccaggaggcggaggttgcagtgagtcaagactgtgccactacaactctagcctgggcaatagagcgagactttgcctcaaaaga-----------------------aaaaaaaaaaaaa-aaaagaaaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80591171 101 + 95678458 caacccaggaggcggaggttgcagtgagtcaagactgtgccactgcacctctagcctgggcaacagagtgagactctacctcaaaaaa-----------------------aaagaaaaagaaa---------- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81017989 101 - 96509753 gaacccaggaggcggaggttgcagtgagtcaagactgtgccactgcaactttagcctgggcaacagagtgagactctacctcaaaaaa-----------------------aaagaaaaagaaa---------- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76275703 101 + 90941950 gaacccaggaggtggaggttgcagtgagtcaacacTGTGCCACTgcaactctagcctgggcaacagagtgagactctacctcaaaaaa-----------------------aaagaaaaagaaa---------- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18544855 124 + 33263144 gaacccaggaggcggaggttgcagtgagtcaacactgtgccactgcaactctagcctgggcaacagagtgagactctacctcaaaaaaaaaaaaaaaaaaaaaaaaaaaacaaagaaaaagaaa---------- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198248375 89 + 210400635 gaacccaggagatggaggttgcagtgagccaagactgcaccactgca-ctctagccggggcaatacagcgagaccctgcccaaaaaaa----------------------------------aa---------- i calJac3.chr1 C 0 C 0 e mm10.chr15 77112333 0 + 104043685 C e canFam3.chr10 40872394 0 - 69331447 C a score=8529.000000 s hg38.chr22_KI270876v1_alt 96867 16 + 263666 aaGAAAAGAAAAAGAA s panTro4.chr22 34474820 16 + 49737984 aagaaaagaaaaagaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30890848 16 + 46535552 aaGAGAAGAGAAAGAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100443501 10 - 115148730 aaga------aaaaaA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80591272 6 + 95678458 ----------aagaaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81018090 6 - 96509753 ----------aagaaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76275804 6 + 90941950 ----------aagaaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18544979 6 + 33263144 ----------aaGAAA i chlSab2.chr19 C 0 C 0 s mm10.chr15 77112333 16 + 104043685 AAGGTGAGATTAAATA i mm10.chr15 C 0 C 0 e canFam3.chr10 40872394 0 - 69331447 C e calJac3.chr1 198248464 0 + 210400635 C a score=3155020.000000 s hg38.chr22_KI270876v1_alt 96883 869 + 263666 TTGGTAGCAGGCAAATCCTTAAAGTCAATGAAAGAAGCCTTAAGAAAGATCAATTTCCTTTGCTTCACAATAATTCAAACAAATTATTTTCTTGGTAAGGAGTAAGTCCTCAATGCCTGATGAAACTACATTGGCCTTCTAGTTGTTAGATTCTAGTTAAGAATATTTTAAGTACATACACTTAACAACTAAAAATATTTAAA---ACTACTTCAGATAGTA-GTTTACAGAGTGGCCAAAAATCT----------CCACATA-TTTATTTTACATTCATGTGCTTCTTATCTC--TAAACCACTGTCATTTTCCCACCTTGTAGCTAAAAAAGATCACATAAAATAAACACAAACAATGCAACAAAGGAACAGAAATCCATCGTGAGAAAAATTATAAGCATAAATAGTTTACTGGTTGCAGTCTGAATAGACTTCACTTTAAAAAATACTTACCAAG-----TGCTGGAGAAAGTTCTGTATAGGCATATTAATCATT------TTTGTTTTAACTGAAAACTGGAAGCTTAGAGTATAATTACCCCTTTAATAGTTAACAAATAATTGTTATAGTCAG-GATTAAACACTTTTAGTGTTGATACATTCTACAAAGGAAGGGAATAATAATAAGTAGCATTAGAACAGCACATACATTTTTAAGTGTACAGATGG---GGACAGGAGG----TATATA-AACTCT-----------GTTATCAATTCCC-AAAGTATGGTGAATTTGGAGTATGAAATTGGAGAGGTAAATATTAGCTCATTTATTGGCTTTATTTAGCTTTCCCTCAAATTACATGTTTAAGAGATTTAACCATAGCCAAA----AGCTATTTTCAAA-GTTCAGCAGAGATGACCAAATG-AAAATTAACTAAAAAATTGCTCTAACCTAACAAATGAAA s panTro4.chr22 34474836 873 + 49737984 TTGGTAGCAGGCAAATCCTTAAAGTCAATGAAAGAAGCCTTAAGAAAGATCAATTTCCTTTGCTTCACAATAATTCAAACAAATTATTTTCTTGGTAAGGAGTAAGTCCTCAATGCCTGATGAAACTACACTGGCCTTCTAGTTGTTACACTCTAGTTAAGAATATTTTAAGTACATACACTTAACAACTAAAAATATTTAAA---ACTACTTCAGATAGTA-GTTTACAGAGTGGCCAAAAATCT----------CCACATA-TTTATTTTACACTCATGTGCTTCTTATCTC--TAAACCACTGTCATTTTCCCACCTTGTAGCTAAAAAAGATCACATAAAATAAACACAAACAATGCAACAAAGGAACAGAAATCCATTGTGAGAAAAATCATAAGCATAAATAGTTTACTGGTTGCAGTCTGAATAGACTTCACTTTAAAAAATACTTACCAAG-----TGCTGGAGAAAGTTCTGTATAGGCATATTAATCATT------TTTGTTTTAACTGAAAACTGGAAGCTTAGAGTATAATTACCCCTTTAATAGTTAACAAATAATCGTTATAGTCAG-AATTAAACACTTTTAGTGTTGATACATTCTACAAAGGAAGGGAATAATAATAAGTAGCATTAGAACAGCACATACATTTTTATGTGTACAGATGG---GGGCAGGAGGTATATATATA-AACTCT-----------GTTATCAATTCCC-AAAGTATGGTGAATTTGGAGTATGAAATTGGAGAGGTAAATATTAGCTCATTTATTGGCTTTATTTAGCTTTCCCTCAAATTACATGTTTAAGAGATTTAACCATAGCCAAA----AGCTATTTTCAAA-GTTCAACAGAGATGACCAAATG-AAAATTAACTAAAAAATTGCTCTAACCTAACAAATGAAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30890864 870 + 46535552 TTGGTAGCAGGCAAATCCTTAAAGTCAATGAAAGAAGCCTTAAGAAAGATCAATTTCCTTTGCTTCACAATAATTCAAACAAATAATTTTCTTGGTAAGGAGTAAGTCCTCAATGCCTGATGAAACTACATTGGCCTTCTAGTTGTTAGACTCTAGTTAAGAATATTTTAAGTACATACACTT-ACAACTAAAAATATTTAAA---ACTACTTCAGATAATA-GTTTACAGAGTGGCCAAAAATCT----------CCACATA-TTTATTTTACACTCATGTGCTTCTTATCTC--TAAACCACTGTCATTTTCCCACCTTGTAGCTAAAAAAGATCACACAAAATAAACACAAACAATGCAACAAAGGAACAGAAATCCATTGTGAGAAAAATTATAAGCATAAATAGTTTACTGGTTGCAGTCTGAATAGACTTCACTTTAAAAAATACTTACCAAG-----TGCTGGAGAAAGTTCTGTATAGGCATATTAATCATT------TTTGTTTTAACTGAAAACTGGAAGCTTAGAGTATAATTACCTCTTTAATAGTTAACAAATAATTGTTATAGTCAGAAATTAAACACTTTTAGTGTTGATACATTCTACAAAGGAAGGGAATAATAATAAGTAGCATTAGAACAGCACATACATTTTTATGTGTACAGATGG---GGGCAGGAGG----TATATA-AACTCT-----------GTTATCAATTCCCAAAAGTATGGTGAATTTGGAGTATGAAATTGGAGAGGTAAATATTAGCTCATTTATTGGCTTTATTTAGCTTTCCCTCAAATTACATGTTTAAGAGATTTAACCATAGCCAAA----AGCTATTTTCAAA-GTTCAGCAGAGATGACCAAATG-AAAATTAACTAAAAAATTGCTCTAACCTAACAAATGAAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100443511 866 - 115148730 TTGGTAGCAGGCAAATCCTTAAAGTCAATGAAAGAAGCCTTAAGAAAGATCAATTTCCTTTGCTTCACAATAATTCAAACAAATTATTTTCTTGGTAAGGAGCAAGTCGTCAATGTCTGATGAAACTACATTGGCCTTCTAGTTGTTAGACTCTAGTTAAGAATATTTTAAGTACATACACTT-ACAACTAAAAATATTTAAA---ACTACCTCAGATAGTA-GTTTACAGAGTGGCCAATAATCT----------CCACATA-TTTATTTTACACTCATGTGCTTCTTATCTC--TAAACCACTGTCATTTTCCCACCGTGTAGCTAAAAAAGATCACACAAAATAAACACAAACAATGCAACAAAGGAACAGAAATCCATTGTGAGAAAAATTATAAGCATAAATAGTTTACTGGTTGCAGTCTGAATAGACTTCACTTTAAAAAATACTTACCAAG-----TGCTGGAGAAAGCTCTCTATAGGCATATTAATCATT------TTTGTTTTAACTGAAAACTGGAAGCTTAGAGTATAATTACCTCTTTAATAGTTAATAAATAATTGTTATAGTCAG-AATTAAACACTTTTAGTGTTGATACATTCTACAAAGGAAGGGAATAATAGTAAGTAGCATTAGAACAGCACATACATTTTTATGTGTACAGATGG---GGGCAGGAGG----TATATA-AACTC-------------TTATCAATTCCC-AAAGTATGGTGAATTTGGAGTATGAAATTGGAGAGGTAAATATTAACTCATTTATTGGCTTTATTTAGCTTTCCCTCAAATTACATGTTTAAGAGATTTAACCATAGCCAAA----AGCTATTTTCAAA-GTTCAGCAGAGATGACCAAATG-AAAATTAACTAAAAAATTGCTCTAACCTAACAAATGAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80591278 857 + 95678458 TTGATAGCAGGCAAATTCTTAAAGTCAATGAAATAAGCCTCAAGAAAGATCAATTTCCTTTGCTTCACAATAATT----CAAATTATTTTCTTGGTAAGGAACAAGTCCTCAATGCCTGATGAAGCTACACTGGCCTTCTAGTTGTTAGACTCTAGTTAAGAATATTTTAAGTACATACACTC-ACAAGTAAAAATATTTAAAACTACTACTTCAGA---TA-GTTTACAGAGTGGCCAATAATCT----------CCATATA-TTTA-TTTACACTCATGTGCTTCTTATCTC--TAAACCACTGTCATTTTCCCACCTTGTAGCTAAAAAATATCACACAAAATAAACACAAACAATGCAACAAAGGAACAGAAATCCATTGTGAGAAAAATTACAAGCATAAATAGTTTACTGGTTGCACTCTAAATAGACTTCACTTTAAAAAATACTTACCAAG-----TGCTGGAGAAAGTTCTGTATAGGCATATTAATCATT------TTTGTTTTAACTGAAAACTGGAAGCTTAGAGTATAATTACCTCTTTAATAATTAACAAATAATTATTATAGTCAG-AATTAAATACTTTTAGTGTTGATACATTCTACAAAGGAAGGC---AATAATAAGTAGCATTAGAACAGCACATACATTTTTATGTGTACAGATGG---GGGCAGGAGG----TATATA-AACTCT-----------GTTATCAATTCCC-AAAGTATGGTGAATTTGGAGTATGAAATTGGAGAGGTAAATATTAGCTCATTTATTGGCTTTATTTAGCTTTCCCTCAAATTACATGTTTAAGAGATTTAACCATAACCAAA----AGCTATTTTCAAA-GTTCAGT---GATGACCAAATG-ATAATTAAGTAAAAAATTGCTCTAACCTAACAAATCAAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81018096 857 - 96509753 TTGATAGCAGGCAAATTCTTAAAGTCAATGAAATAAGCCTCAAGAAAGATCAATTTCCTTTGCTTCACAATAATT----CAAATTATTTTCTTGGTAAGGAACAAGTCCTCAATGCCTGATGAAGCTACACTGGCCTTCTAGTTGTTAGACTCTAGTTAAGAATATTTTAAGTACATACACTC-ACAAGTAAAAATATTTAAAACTACTACTTCAGA---TA-GTTTACAGAGTGGCCAATAATCT----------CCATATA-TTTA-TTTACACTCATGTGCTTCTTATCTC--TAAACCACTGTCATTTTCCCACCTTGTAGCTAAAAAATATCACACAAAATAAACACAAACAATGCAACAAAGGAACAGAAATCCATTGTGAGAAAAATTACAAGCATAAATAGTTTACTGGTTGCACTCTAAATAGACTTCACTTTAAAAAATACTTACCAAG-----TGCTGGAGAAAGTTCTGTATAGGCATATTAATCATT------TTTGTTTTAACTGAAAACTGGAAGCTTAGAGTATAATTACCTCTTTAATAATTAACAAATAATTATTATAGTCAG-AATTAAATACTTTTAGTGTTGATACATTCTACAAAGGAAGGC---AATAATAAGTAGCATTAGAACAGCACATACATTTTTATGTGTACAGATGG---GGTCAGGAGG----TATATA-AACTCT-----------GTTATCAATTCCC-AAAGTATGGTGAATTTGGAGTATGAAATTGGAGAGGTAAATATTAGCTCATTTATTGGCTTTATTTAGCTTCCTCTCAAATTACATGTTTAAGAGATTTAACCATAACCAAA----AGCTATTTTCAAA-GTTCAGT---GATGACCAAATG-AAAATTAAGTAAAAAATTGCTCTAACCTAACAAATCAAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76275810 861 + 90941950 ttgatagCAGGCAAATTCTTAAAGTCAATGAAAGAAGCCTCAAGAAAGATCAATTTCCTTTGCTTCACAATAAttcaaacaaattattttcttggtaAGGAACAAGTCCTCAATGCCTGATGAAGCTACATTGGCCTTCTAGTTGTTAGACTCTAGTTAAGAATATTTTAAGTACATACACTc-acaagtaaaaatatttaaaactactaCTTCAGA---TA-GTTTACAGAGTGGCCAATAATct----------ccatata-ttta-tttacactCATGTGCTTCTTATCTC--TAAACCACTGTCATTTTCCCACCTTGTAGCTAAAAAATATcacacaaaataaacacaaacaatgcaacaaaggaacagaaatccatTGTGAGAAAAATTACAAGCATAAATAGTTTACTGGTTGCAGTCTAAATAgacttcactttaaaaaatacttaccaAG-----TGCTGGAGAAAGTTCTGTATAGGCAtattaatcatt------tttgttttaactgaAAACTGGAAGCTTAGAGTATAATTACCTCtttaataattaacaaataattattatagTCAG-AATTAAATACTTTTAGTGTTGATACATTCTACAAAGGAAGGC---AATAATAAGTAGCATTAGAACAGcacatacatttttatgtgtacagATGG---GGGCAGGAGG----TATATA-AACTCT-----------GTTATCAATTCCC-AAAGTATGGTGAATTTGGAGTATGAAATTGGAGAGGTAAATATTAGCTCATTTATTGGCTTTATTTAGCTTTCCCTCAAATTACATGTTTAAGAGATTTAACCATAACCAAA----AGCTATTTTCAAA-GTTCAGT---GATGACCAaatg-aaaattaagtaaaaaattgCTCTAACCCAACAAATCAAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18544985 864 + 33263144 TTGATAGCAGGCAAATTCTTAAAGTCAATGAAAGAAGCCTCAAGAAAGATCAATTTCCTTTGCTTCACAATAATTCAAACAAATTATTTTCTTGGTAAGGAACAAGTCCTCAATGCCTGATGAAGCTACATTGGCCTTCTAGCTGTTAGACTCTAGTTAAGAATATTTTAAGTACATACATTC-ACAAGTAAAAATATTTAAAACTACTACTTCAGA---TA-GTTTACAGAGTGGCCAATAATCT----------CCACATA-TTTA-TTTACAGTCATGTGCTTCTTATCTC--TAAACCACTGTCATTTTCCTACCTTGTAGCTAAAAAATATCACACAAAATAAACACAAACAATGCAACGAAGGAACAGAAATCCATTGTGAGAAAAAATACAAGCATAAATAGTTTACTGGTTGCAGTCTAAATAGACTTCACTTTAAAAAATACTTACCAAG-----TGCTGGAGAAAGTTCTGTATAGGCATATTAATCATT------TTTGTTTTAACTGAAAACTGGAAGCTTAGAGTATAATTACCTCTTTAATAATTAACAAATAATTATTATAGTCAG-AATTAAATACTTTTGGTGTTGATACATTCTACAAAGGAAGGCAATAATAATAAGTAGCATTAGAACAGCACATACATTTTTATGTGTACAGATGG---GGGCAGGAGG----TATATA-AACTCT-----------GTTATCAATTCTC-AAAGTATGGTGAATTTGGAGTATGAAATTGGAGAGGTAAATATTAGCTCATTTATTGGCTTTATTTAGCTTTCCCTCAAATTACATGTTTAAGAGATTTAACCATAACCAAA----AGCTATTTTCAAA-GTTCAGT---GATGACCAAATG-AAAATTAAGTAAAAAACTGCTCTAACCTAACAAATCAAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198248464 860 + 210400635 --GGTAGCACCCAAATCCTTAAAGCCAATGAAAGAAGCCTTAAGAAAGATCAATTTCCTTTGCTTCACAATAATTCAAACAAATTATATTCTTGGTAAGGAGCAAGTCCTTAATGCCTGATGAAACTACATTGGCCTTCTAGTTGTTAGACTCTAGTTAAGAATATTTTAAGTGCATACATTT-ACAACTTAAAATATTTAAAACTACTACTTCAGATAGTAGGTTTCCAGAGTGGTCAATAATCT----------CCACATATTTTATTTTACACTCATGTG---CTTATCTC--TAAACCACTGTCATTTTCCCACCTTGTAGC-AAAAAGGATCACACAAAATAAACACAAACAATGCGACAAAGGAACAGAAATCCACTGTGAGAAAAATTACAAGCATA---GTTTTACTGGTTGCAGTCTGAATAGACTTCACTTTAAAAAATACTTACCTAG-----TGCTGGAGAAAGTTCTGTATAGGCATATTAATCGTT------TTTGTTTTAACTGAAAACTGGAAGCTTAGAGTGTAATTACCTCTTTAATAATTAACAAAAAATTGTTATAGTCAG-AATTAAACACTTTTAGTGTTGATATATTCTACAAAGGAAGGGAATAATAATAAGTAGCATTAAAACAGCACATACGTTTTTATGTGTACAGATGG---GGGCAGGAGG----TATATACCACTCT-----------GTTATCAATTCCC-AAAGTATGGTGAATTTGGAGTATGAAATT-----GGTAAATATTGGCTCATTTATTGGCTTTATTTAGCTTTCCCTCAAATTTCATGTTTAAGAGATTTAACCATAGCCAAA----AGCTATTTTCAAA-ATTCAGTAGAGATGACCAAATG-AAAATTAACTAAAAAATTGCTCTCACTTAACAAATGAAA i calJac3.chr1 C 0 C 0 s mm10.chr15 77112349 748 + 104043685 TTGGTAGCAGGTGAATCC-TGAAGTCAGCGA---AAGCCTTTAGAAAGATCAATTTCCTTTGCTTCACAAGATTTCAACC---TTTTTTTTCCTTTAAGGAGCAATTCCTTAG-GCCTGG-GCACCTGCACTGGCCTTCTGGCTGGGATGCT-TAACAAAGGCTATGTGACGAACACACAACT-------------ATCTCAGTTCACCACTTTGGA---TG-AC---CAGTGTGGTCAGAGACCGTACTTACTGACCTCACT-TTCA-CCTTCACTCATGTGCTTC-AGCCTC--AGGACCATGGGC--TTTCCCAC--TGCAGCTAA--------ATGCTTAGTCAACACAGA-----------------------------TGTTCACAAGTACAAGCATCACAAGTT--------------TGAACAGACTCTACTGT--AAGATACTTACCAGGTTAAATGCTGGAGGAAGGTCTGTATAGACATATTAATCTTTTTTCTGTTTGTTTTAACTGAAAGCTGGAAGCTTAAAGTATAGTTATCTCTTTAACAACGAATAAATACCAGTTATTG---G------------------------ACACTCTAT-AAGGGAGGCAAGAATACTGAG--GCTTCAGA---------GTGTGTGTGTCCGTGCAGGTGGGGTGGGCGGGAGC----TGAGGG-------------------CTAGCAACTACT-GCAGCGCAG-GAATCTGCAGT---GGACCGCAAAGGTAAATGTTAACTCATTTACTG----CATTCAGCTTTTCCTTAAATT--ATCTCTTAGGGCTTCAGTCATGGCCAAG----AGCTATTTTGAAA-G--AAGCAGATATGACCAAATA-AAAATTAGTTTTAAATTTACTCT---TCAACAAGGAAAA i mm10.chr15 C 0 I 487 s canFam3.chr10 40872394 850 - 69331447 TTGGTAGTAAGCAAATCTTTGAA------GAAAGAAGCCTTAAGAAAGATCAATTTCCTTTGCTTCACAAGAATTCAATCCATTTATTTTCTTGGTAAGGAGCAAGACCCCAATGCCTGATGAAATCATACTGGGCTTCGGGTTATTGGGGTCTAGTTGAGAACAGTACGTGTACATACACTT-AAAACTAAAAACATGTAAA-CTATGACTTTGGA---TA-A---ACAGTATAGCATAGAATTT----------TCACATA-TTCATGATATGT-----TGCTTCTCATCTCTATAAACCATTGTCACTTTTCCACCTTGGA---TAAAAAGGTCACAAAAAATGAA------------AGCAAAGGGCCAGAAATCCACTGTGA-AGAAACTACAAGCATA---GTTTTAC--ATTATAGGCTAAACAGATTTCATTTT-AAAAATACTTACCAAGTTAAGTGCTGAAGAAAGTTCTGTATAGGTATATTAATCTTTTTTTTTTTTGTTTTAACTGAAAACTGGAAGCTTA-----TAGTTACCTCTTTCATAATTAACAAATAATTATTATAATCAG-AATTAGACACTAGCAGTGTTGATGTGGTCTATAAAGGAAGGGAATAATAATCAGGAGTATTAGAACAGTACATACATTTGTGTTAGTTTAGATG----GGGCAGGAGG----TATGTA-ACTCCCTGTAGATATAGGCTATTAATTCCC-AAGGTATGGTGAATTTACAGTAGGAAACTGAAGAGGTAAATATTAACTCACTGATTCACTTTATTTAGCTTT-TCTCAAATTATAT-TCTTAGAGATTTAATTATAGCCAAGGGCTGGCTATTTTCAAATAGCCAGAAAAGATGACCAAATGAAAAATTAACTC--AAACTGTTCTAACCTAAAAATTTAA- i canFam3.chr10 C 0 C 0 a score=814037.000000 s hg38.chr22_KI270876v1_alt 97752 252 + 263666 GTAGCA------ACAGCAAGGTAAATATTTATAGGCTTGGCTATGGCTGATGGTTTCAGTAGGATGTATTTCATTTAATAA-GCAGTGAGAAAACTCTCAAGTAACATGTGCAAATATTCAGTTCATCAAATACTTTTTTTTTTTTTCACAACACCACTGTAAGTCTTTGCCATTCCCTTGTTCTTAAAAACATTGCTGTTTCTTTTAATGCATGGAAATTCTAAATCATACAGATTGGGAATTTAAAATAGTAAATAG s panTro4.chr22 34475709 249 + 49737984 GTAGCA------ACAGCAAGGTAAATATTTATAGGCTTGGCTATGGCTGATGGTTTCAGTAGGATGTATTTCATTTAATAA-GCAGTGAGAAAACTCTCAAGTAACATGTCCAAATATTCAGTTCATCAAATAC--TTTTTTTTTTTCACAACACTACTGTAAGTCTTTGCCATTCCCTTGTTC-TAAAAACATTGCTGTTTCTTTTAATGCATGGAAATTCTAAATCATACAGATTGGGAATTTAAAATAGTAAATAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30891734 250 + 46535552 GTAGCA------ACAGCAAGGTAAATATTTATAGGCTTGGCTATGGCTGATGGTTTCAGTAGGATGTATTTCATTTAATAA-GCAGTGAGAAAACTCTCAAGTAACATGTCCAAATATTCAGTTCATCAAATAC--TCTATTTTTTTCACAACACCACTGTAAGTCTTTGCCATTCCCTTGTTCCTAAAAACATTGCTGTTTCTTTTAACGCATGGAAATTCTAAATCATACAGATTGGGAATTTAAAATAGTAAATAG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100444377 251 - 115148730 GTAGCA------ACAGCAAGGTAAATATTTATAGGCTTGGCTATGGCTGATGGTTTCAGTAGGATGTATTTCATTTAATAA-GCAGTGAGAAAACTCTCAAGTAACATGTCCAAATACTCAGTTCATCAAATAC-TTTTTTTTTTTTCACAACACCACTGTAAGTCTTTGCCATTCCCTTGTTCCTAAAAACATTGCTGTTTTTTTTAATGCATGGAAATTCTAAATCATACAGATTGGGAATTTAAAATAGTAAATAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80592135 248 + 95678458 GTAGCA------ACAGCAAGGTAAATATTTATAGGCTTGGCTATGGCTGATGGTTCCAGTAGGATGTATTTCATTTAATAA-GCAGTGAGAAAACTCTCAAGTAACATGTCCAAAAATTCAGCTCATCAAAAAC--TTTTTTTTT--CATAACACCACTGTAAGACTTCGCTATTCCCTTGTTCCTAAAAACATTGCTGTTTCTTTTAATGCGTGGAAATTCTAAATCATATAGATTGGGAATTTAAAATAGTAAATAG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81018953 248 - 96509753 GTAGCA------ACAGCAAGGTAAATATTTATAGGCTTGGCTATGGCTGATGGTTCCAGTAGGATGTATTTCATTTAATAA-GCAGTGAGAAAACTCTCAAGTAACATGTCCAAAAATTCAGTTCATCAAAAAC--TTTTTTTTT--CATAACACCACTATAAGACTTCGCTATTCCCTTGTTCCTAAAAACATTGCTGTTTCTTTTAATGTGTGGAAATTCTAAATCATACAGATTGGGAATTTAAAATAGTAAATAG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76276671 246 + 90941950 GCAGCA------ACAGCAAGGTAAATATTTATAGGCTTGGCTATGGCTGATGGTTCCAGTAGgatgtatttcatttaataa-gCAGTGAGAAAACTCTCAAGTAACATGTCCAAAAATTCAGTTcatcaaacac--ttttttttt--cataacacCAC--TAAGACTTCGCCATTCCCTTGTTCCTAAAAACATTGCTGTTTCTTTTAATGCGTGGAAATTCTAAATCATATAGATTgggaatttaaaatagtaaatag i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18545849 250 + 33263144 GTAGCA------ACAGCAAGGTAAATATTTATAGGCTTGGCTATGGCTGATGGTTCCAGTAGGATGTATTTCATTTAATAA-GCAGTGAGAAAACTCTCAAGTAACATGTCCAAAGATTCAGTTCATCAAACAC--TTTTTTTTTTCCATAATACCACTATAAGACTTCGCCATTCCCTTGTTCCTAAAAACACTGCTGTTTCTTTTAATGTGTGGAAATTCTAAATCATATAGATTGGGAATTTAAAATAGCAAATAG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198249324 251 + 210400635 GTAGCA------AAAGCAAGGTAAATATTTACAGGCTTGGCCATAGCTAATGGTTTTGGTAGAATGTATTGCATGTAATGA-GCAGTGAGCAAACTCTCAAGTAAAACATCCAAAAATTCAATTCATCAAATTC-TTCATTTTTTTTCACACCACCACTGTAAGATTTTGCCATTCTCTTGTTCCTAAAACCATTGCTGTTTCTCTTAATGCATGGAAATTCTAATTCATATAGATTGGAAATTTAAAATAGTAAACAG i calJac3.chr1 C 0 C 0 s canFam3.chr10 40873244 243 - 69331447 GTAGAAGGGAACACAGCAAGGGCAGTATTTACAAGCTTGACCATAGCTGATCGTGTTTGTGTGGCATAGTTCACTTATTGAGGAAGGAAGAAAACTGTCAAATGAAACTTTTCTAAACTCAGTTTATTAAATAT--TGTTTTAAT------GAACCACTGTCAGACTTCATCATTCCCTCACTCCTAAAATCACTGCTGCGTATTTTAGTGCACTGAAATTC-AAATAATATAGATTGGGAATTTAAAATAG------- i canFam3.chr10 C 0 C 0 e mm10.chr15 77113097 487 + 104043685 I a score=516837.000000 s hg38.chr22_KI270876v1_alt 98004 176 + 263666 GGGAAATAA------ttttttttttttttttgagacagtcttgctctgtcacccaggctggagtgcagtggcgcaatctcggctcactgtaacctctgcctcctgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcgtgtgccaccaggcctggctaatttt s panTro4.chr22 34475958 175 + 49737984 GGGAAATAA-------tttttttttttttttgagacagtcttgctctgtcacccaggctggagtgcagtggcgcaatctcggctcactgtaatctctgcctcctgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcgtgtgccaccaggcccggctaatttt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30891984 169 + 46535552 GGGAAATAA-------------tttttttttgagacagccttgctctgtcacccaggctggagtgcagtggcgcaatctcggctcactgtaacctctgcctcctgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcgtgtgccaccaggcccggctaatttt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100444628 174 - 115148730 GGGAAATAA--------ttttttttttttttgagacagtcttgctctgtcacccaggctggagtgcagtggcgcaatctcggctcactgtaacctctgcctcctgggttcaagtgattctcctgccccagcctcccgagtagctgggattacaggcatgtgccaccatgcccagctaatttt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80592383 182 + 95678458 GGGAAATAAtttttatttatttatttattttgagatagtcttgctctgttgcccaggttggaatgtagtggcacaatctcggttcactgtaacctctgcctcctgggttcaagtgattctcctgcctcagtctcccgagtagctgggattacaggcgtgtgccaccgtgcccggctaatttt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81019201 182 - 96509753 GGGAAATAAtttttatttatttatttattttgagatagtcttgctctgtcgcccaggttggaatgtagtggcacaatctcggttcactgtaacctctgcctcctaggttcaagtgattctcctgcctcagtctcccgagtagctgggattacaggcgtgtgccaccgtgcccggctaatttt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76276917 181 + 90941950 gggaaataa-ttttatttatttatttattttgagatagtcttgctctgtcgcccaggctggagtgcagtggcacaatctcggttcactgtaacctctgcctcctgggttcaagtgattctcctgcctcagtctcccgagtagctgggattacaggcgtgtgccaccgtgcccggctaatttt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18546099 182 + 33263144 GGGAAATAAtttttatttatttattttttttgagacagtcttgctctgtcacccaggctggagtgcagtggcacaatctcggttcactgtaacctctgcctcctgggttcaagtgattctcctgcctcagtctcccgagtagctgggattacaggcatgtgccaccatgcccggctaatttt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198249575 170 + 210400635 GGGAAATAA----------tttttttgttttgaa--agtattgctctgtcacccaggctggagtgcaatgatgcaatcttggttcactgtaacctctgcctcctaggttcaagtgattctcctgcctcagcctcccaagtagctgggattacaagcatatgccaccatgccaggctaatttc i calJac3.chr1 C 0 C 0 e mm10.chr15 77113097 487 + 104043685 I e canFam3.chr10 40873487 0 - 69331447 C a score=26241.000000 s hg38.chr22_KI270876v1_alt 98180 8 + 263666 tgtatttt s panTro4.chr22 34476133 8 + 49737984 tgtatttt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30892153 8 + 46535552 tgtatttt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100444802 8 - 115148730 tgtatttt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80592565 8 + 95678458 tgtatttt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81019383 8 - 96509753 tatatttt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76277098 8 + 90941950 tgtatttt i papAnu2.chr10 C 0 M 244 s chlSab2.chr19 18546281 8 + 33263144 tgtatttt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198249745 8 + 210400635 tgtattct i calJac3.chr1 C 0 C 0 s canFam3.chr10 40873487 8 - 69331447 TAAATTAT i canFam3.chr10 C 0 C 0 e mm10.chr15 77113097 487 + 104043685 I a score=6300.000000 s hg38.chr22_KI270876v1_alt 98188 3 + 263666 tag s panTro4.chr22 34476141 3 + 49737984 tag i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30892161 3 + 46535552 tag i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100444810 3 - 115148730 tag i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80592573 3 + 95678458 aag i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81019391 3 - 96509753 aag i macFas5.chr10 C 0 C 0 s chlSab2.chr19 18546289 3 + 33263144 aag i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198249753 3 + 210400635 tag i calJac3.chr1 C 0 C 0 s canFam3.chr10 40873495 3 - 69331447 TAG i canFam3.chr10 C 0 C 0 e mm10.chr15 77113097 487 + 104043685 I e papAnu2.chr10 76277106 244 + 90941950 M a score=294441.000000 s hg38.chr22_KI270876v1_alt 98191 123 + 263666 cagagacagagtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccgcccgcctcagcctcccaaagtgctgggatta-caggcgtgagccactgcgcccagccTAATA s panTro4.chr22 34476144 123 + 49737984 cagagacagagtttcaccatgctggccaggctggtctcgaactcctgacctcaggtgatccgcccgcctcagcctcccaaagtgctgggatta-caggcgtgagccactgcgcccagccTAATA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30892164 123 + 46535552 cagagacagagtttcaccatgttggccaggctggtcttgaacccctgacctcaggtgatccgcctgccttggcctcccaaagtgctgggatta-caggtgtgagccactgcgcccagtcTAACA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100444813 124 - 115148730 cagagacagagtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccacctcggcctcccaaagtgctgggattaccaggcatgagccactgcgcccagccTAATA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80592576 123 + 95678458 tagagacggagtttcaccatgttggccaggctggtcttgaactcttgacctcaggtgatccgcccgcctcggcctcccaaagtgctgggatta-caggcgtgagccaccccgcccagccTAATA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81019394 123 - 96509753 tagagacggagtttcaccatgttggccaggctggtcttgaactcttgacctcaggtgatccgcccgcctcggcctcccaaagtgctgggatta-caggcgtgagccaccccgcccagccTAATA i macFas5.chr10 C 0 C 0 s chlSab2.chr19 18546292 123 + 33263144 tagagacagagtttcaccatgttggccaggctggtcttgaactcttgacctcaggtgatccacccgcctcagcctcccaaagtgctgggatta-caggcatgagccaccccgcccagccTAACA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198249756 123 + 210400635 tagagacggggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatcccccgaccttggcctcccaaagtgctgggatta-caggcgttagccacagtgcccagccTAATA i calJac3.chr1 C 0 C 0 e mm10.chr15 77113097 487 + 104043685 I e canFam3.chr10 40873498 0 - 69331447 C e papAnu2.chr10 76277106 244 + 90941950 M a score=565673.000000 s hg38.chr22_KI270876v1_alt 98314 224 + 263666 GGGGAAATAAATTTTAATTAAAAATTTCAGTTCTTATATAGAACACATTTAGAGGAAAATACACACGTAAAAGTACACAC--TTACTACTTTCATTCTTATG-CAAAAAAAA-CTAACTCACTGTATTTGTGATTTAGGTGACTCTACATCCTGAGGATTGCCTATGTGGGTAGAACTTA--------------------------------------------------------------AGGAA---ATCAGTTCATACTGAATTCCTCAGTTATTGCTCACTCTGTTTA s panTro4.chr22 34476267 224 + 49737984 GGGGaaataaattttaattaaaaatttCAGTTCTTATATAGAACACATTTAGAGTAAAATACACACGTAAAAGTACACAC--TTACTACTTTCATTCTTATG-CAAAAAAAA-CTAACTCACTGTATTTGTGATTTAGGTGACTCTACATCCTGAGGATTGCCTATGTGGGTAGAACTTA--------------------------------------------------------------AGGAA---ATCAGTTCATACTGAATTCCTCAGTTATTGCTCACTCTGTTTA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30892287 225 + 46535552 GGGGaaataaattttaattaaaaatttCAGTTCTTATATAGAATACATTTAGAGGAAAATACACACTTAAAAGTACACAC--TTACTACTTTCATTCTTATG-CAAAAAAAATCTAACTCACTGTATTTGTGATTTAGGTGACTCTACATCCTGAGGATTGCCTATGTGGGTAGAACTTA--------------------------------------------------------------AGGAA---ATCAGTTCATACTGAATTCCTCAGTTATTGCTCACTCTGTTTA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100444937 222 - 115148730 GGGGAAATAAATTTTAATTAAAAATTTCAGTTCTTACATAGAACACATTTAGAGGAAAATACACA--TAAAAGTACACAC--TTACTACTTTCATTCTTATG-CAAAAAAAT-CTAACTCACTGTATTTGTGATTTAGGTGACTCTACATCCTGAGGATTGCCTATGTGGGTAGAACTTA--------------------------------------------------------------AGGAA---ATCAGTTCATACTGAATTCCTCAGTTATGGCTCACTCTGTTTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80592699 225 + 95678458 GGGGAAATAAATTTTAATTAAAAACTTCAGTTCTTATATAGAACACATTTAGAGGAAAATACACACATAAAAGTACACAC-----ATACTTTCATTCTTATG-CAAAAAAAT-CTAACTCACTGTACTTGTGATTTAGGTGACTCTACATCCTGAGGATTGCCTATGTGGGTAGAACTTAAAGG----------------------------------------------------------AGGAA---ATCAGTTCATACTAAATTCCTCAGTTATTTCTCACTCTGTTTA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81019517 225 - 96509753 GGGGAAATAAATTTTAATTAAAAACTTCAGTTCTTATATAGAACACATTTAGAGGAAAATACACACATAAAAGTACACAC-----ATACTTTCATTCTTATG-CAAAAAAAT-CTAACTCACTGTACTTGTGATTTAGGTGACTCTACATCCTGAGGATTGCCTATGTGGGTAGAACTTAAAGG----------------------------------------------------------AGGAA---ATCAGTTCATACTAAATTCCTCAGTTATTTCTCACTCTGTTTA i macFas5.chr10 C 0 C 0 s chlSab2.chr19 18546415 225 + 33263144 GGGGAAATAAATTTTAATTAAAAACTTCAGTTCTTATATAGAACACATTTAGAGGAAAATACACACATAAAAGTACACAC-----ATACTTTCATTCTTATG-CAAAAAAAT-CTAACTCACTGTACTTGTGATTTAGGTGACTCTACATCCTGAGGATTGCCTATGTGGGTAGAACTTAAAGG----------------------------------------------------------AGGAA---ATCAGTTCATACTAAATTCCTCAGTTATTTCTCACTCTGTTTA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198249879 217 + 210400635 GGGAAAATACATTGTAATTAAAAATTTTAGTTCTTATATAGAACGTATTT-------AATACACACATAAAAGTACACAC------TACTTTCATTCTGATG-CAAAAAAAT-CTAACTCACTATATGTGTCATTTAGGTGACTCTACAACCTGAGGACTGCCTATGTGTGTAGAATTTAAAGG----------------------------------------------------------AGGAA---ATCAGTTCATAGTGAATTCCTCAGTTATTGCTCACTGTGTTTA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40873498 285 - 69331447 GGGGAAATGAGTTTTAATTAAATTGTTCAGTTCTCATAGAAAACACGCTTAG-----AAAACCTGTATCGAATTGTGCACCGTTAGTACATTCATTCTGATGCCAGAAAAAC-CCAACTCAC--TATTTGTAATTGAAGGGATTCTACATTCTGAAGCTTGCCAGTCTGGGTAGGACTCAAAGGAAGAGGTATCCTAGAAGAGGTACCTAGGTTTTGACTGGGAAGTCTGGGTAGGACTCGAAGGAAGGCATCAGCTTACAGTGAATTCCTGAGTCACTACTCCCTGTATTTA i canFam3.chr10 C 0 C 0 e mm10.chr15 77113097 487 + 104043685 I e papAnu2.chr10 76277106 244 + 90941950 M a score=1199178.000000 s hg38.chr22_KI270876v1_alt 98538 366 + 263666 AGTCTTGTCACAATT-TTCAAAAGAGACTGCAAGTTAACTGAATAATCAAAACATTAAATTTGTTCTAAGTATGCTGTTTTGAAGTTGGATTTT----GGTTGAATTGTTCTGATAGAATTCAGAATAGAATTCTCATAGAATTTCAC--TTTATTTAGTCTTTGCACTTTTCCTTTAAACGGAGAAAGCTGAGGCCGAATTTAAGGCTCATAAAGCACTGTCATCTCCTACATCCTGTGTTCTTTACGTCCCACTCTTCCCTCAACCTTCTC-TGCTTCTTACTTCATCA-CCCTTCCACCCCCATA-TAAGTATCAGAATAAAGTTTGGCCATGTGGTAGCTTATTTTTAGAGATAATCTAAACCAAGGTGGAT s panTro4.chr22 34476491 366 + 49737984 AGTCTTGTCACAATT-TTCAAAAGAGACTGCAAGTTAACTGAATAATCAAAACATTAAATTTGTTCTAAGTATGCTGTTTTGAAGTTGGATTTT----GGTTGAATTGTTCTGATAGAATTCAGAATAGAATTCTCGTAGAATTTCAC--TTTATTTAGTCTTTGCACTTTTCCTTTAAACGGAGAAAGCTGAGGCCGAATTTAAGGCTCATAAAGCACTGTCATCTCCTACATCCTGTGTTCTTTATGTCCCACTCTTCCCTCAACCGTCTC-TGCTTCTTACTTCATCA-CCCTTCCACCCCCATA-TACGTATCAGAATAAAGTTTGGCCATGTGGTAGCTTATTTTTAGAGATAATCTAAACCAAGGTGGAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30892512 367 + 46535552 AGTCTTGTCACAATT-TTCAAAAGA-ACTGCAAGTTAACTGAATAATCAAAACATTAAATTTGTTCTAAGTATGCTGTTTTGAAGTTGGATTTT----GGCTGAATTGTTCTGACAGAATTCAGAATAGAATTCTCGTAGAATTTCACTTTTTTTTTAGTCTTTCCACTTTTCCTTTAAACGGAGAAAGCTGAAGCCGAATTTAAGGCTCATAAAGCACTGTCATCTCCTACATCCTGTGTTCTTTACGTCCCACTCTTCCCTCAACCTTCTC-TGCTTCTTACTTCATCA-CCCTTCCACCCCCATA-TAAGTATCAGAATAAAGTTTGGCCATGTGGTAGCTTATTTTTAGAGATAATCTAAACCAAGGTGGAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100445159 367 - 115148730 AGTCTTGTCACAATT-TTCAAAAGAGACTGCAAGTTAACTGAATAATCAAAACATTAAATTTGTTCTAAGTATGCTGTTTTGAAGTTGGATTTT----GGCTGAATTGTTCTGACAGAATTCAGAATAGAATTCTCGTAGAATTTCAC-TTTTTTTTAGTCTTTGCACTTTTCCTTTAAACGGAGAAAGCTGAGGCTGAATTTAAGGCTCATAAAGCACTGTCATCTCCTACATCCTGTGTTCTTTACGTCCCACTCTTCCCTCAACCTTCTC-TGCTTCTTACTTCATCA-CCCCTCCACCCCCATA-TAAGGATCAGAATAAAGTGTGGCCATGTGGTAGCTTATTTTTAGAGATAATCTAAACCAAGGTGGAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80592924 367 + 95678458 AGTGTTATCACAATT-TTCAAAAGAGACTGCAAGTTAACTGAATAATCAAAGCATTAAACTTGTTCTAAGTATGTTGTTTTGAAGTTGGATTTT----GGCTGAATTGTTCTGATAGAATTCAGAATAGAATTCTCATAGAATTTCAC-TTTTTTAAAGTCTTTGTGCTCCTTCTTTAAATGGAGAAAGCTGAGGCCAAATTTAAGGCTCATAAAGCACTGTCATCTCCTACATCCTGTGTTCTTTATGCCCCACTCTTCCCTCAACCTTCTC-TGCTTCTTACTTTATCA-GCCCTCCACCCCTGTA-TAAGTATCAGAATAAAGTTTGGCCATGTGGTAGCTTATTTTTAGAGATAATCTACCTTAAGGTAGAC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81019742 367 - 96509753 AGTGTTATCACAATT-TTCAAAAGAGACTGCAAGTTAACTGAATAATCAAAGCATTAAACTTGTTCTAAGTATGTTGTTTTGAAGTTGGATTTT----GGCTGAATTGTTCTGATAGAATTCAGAATAGAATTCTCATAGAATTTCAC-TTTTTTAAAGTCTTTGTGCTCTTTCTTTAAATGGAGAAAGCTGAGGCCAAATTTAAGGCTCATAAAGCACTGTCATCTCCTACATCCTGTGTTCTTTATGCCCCACTCTTCCCTCAACCTTCTC-TGCTTCTTACTTTATCA-GCCCTCCACCCCTGTA-TAAGTATCAGAATAAAGTTTGGCCATGTGGTAGCTTATTTTTAGAGATAATCTACCTTAAGGTAGAC i macFas5.chr10 C 0 I 209 s papAnu2.chr10 76277351 367 + 90941950 aGTGTTATCACAATT-TTCAAAAGAGACTGCAAGTTAACTGAATAATCAAAGCATTAAACTTGTTCTAAGTATGTTGTTTTGAAGTTGGATTTT----GGCTGAATTGTTCTGATAGAATTCAGAATAGAATTCTCATagaatttcac-tttttttaagtCTTTGTGCTCTTTCTTTAAACGGAGAAAGCTGAGGCCAAATTTAAGGCTCATAAAGCACTGTCATCTCCTACATCCTGTGTTCTTTATGCCCCACTCTTCCCTCAACCTTCTC-TGCTTCTTACTTTATCA-GCCCTCCACCCCTGTA-TAAGTATCAGAATAAAGTTTGGCCATGTGGTAGCTTATTTTTAGAGATAATCTACCTTAAGGTAGAT i papAnu2.chr10 M 244 C 0 s chlSab2.chr19 18546640 357 + 33263144 AGTGTTATCACAATG-TGCAAAAGAGACTGCAAGTTAACTGAATAATCAAAGCATTAAACTTGTTCTAAGTATGTTGTTTTGAAGTTGGATTTT----GGCTGAATTGTTCTGATAGAATTCAGAATAGAATTCTCATAGAATTTCAC-TTTTTTTTAGTCTTTGTGCTCTTTTGTTAAATGGAGAAAGCTGAGGCCAAATTTAAGGCTCATAAAGCACTGTCATCTCCTACATCCTGTGTTGTTTATG----------CCCTCAACCTTCTC-TGCTTCTTACTTCATCA-GCCCTCCACCCCTGTA-TAAGTATCAGAATAAAGTTTGGCCATGTGGTAGCTTATTTTTAGAGATAATCTACCTTAAGGTAGAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198250096 367 + 210400635 AGTCTTGCCATAATT-TTCAAAAGAGACTGCATGTTAACTGAATAATCAAAACATTAAATTTGTTCTAAGTATGCTGTTTTGAAGCTGAATTTT----GGCTGAATTCTTCTGATAGAATTCAGAATAGAATTCCCATAGAATTTCAC--CTTTTTTAGTCTTTGTGCTCTTCCTTTAAACAGAGAAAGCTGAGGCCAAAGTTAAGGCTCATAAAGAACTGTCATCTCCTACATCCTGTGTTCTTTACCTCCCACTCTCCCCTCAAGCTTCTC-TGCTTCTTATTTCATCACCCCCCCCACCCCCATA-TAAGTATCAGAATCAAGTTTGGCCATGTGGTAGCTTATTTTTAGGGATAATCTAACCCAAGGTGGAT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40873783 347 - 69331447 TGCCTCATCAAGTTTATCCAAAAGAGAAAGAGAGTCAACTGAAGGATCGAAATACTAAATTTGTTCTAAGTATGTCATTTCAGAGTCTGATTGTTAAAAGCTGAATTGTTCTGGTACAATTCACAACAGAATTCTCATAGAAATTCAC------TTGAGTCTTCTCTCTTCCCCTTTAAAATGAGG----TGAGGGC-AATTTCAGTTTGATAAAGGGCAGGTGTCTCCTGCTCCGGAT---------------CTCCCTCCTCACACTTCTCTTGCTTCCAAGCCCAC---CCCTCCCTCCCCCAAACTAAGTACTAGGATAAAGTCTGGCCATGTGGTTACTTATTTTTAGAGATAATCTGATCCAAGCCAGGT i canFam3.chr10 C 0 C 0 e mm10.chr15 77113097 487 + 104043685 I a score=4255.000000 s hg38.chr22_KI270876v1_alt 98904 2 + 263666 AA s panTro4.chr22 34476857 2 + 49737984 AA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30892879 2 + 46535552 AA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100445526 2 - 115148730 AA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80593291 1 + 95678458 -A i rheMac3.chr10 C 0 I 211 s macFas5.chr10 81020318 1 - 96509753 -A i macFas5.chr10 I 209 I 1 s papAnu2.chr10 76277718 1 + 90941950 -A i papAnu2.chr10 C 0 I 213 s chlSab2.chr19 18546997 1 + 33263144 -A i chlSab2.chr19 C 0 I 221 s calJac3.chr1 198250463 1 + 210400635 -A i calJac3.chr1 C 0 I 1 s canFam3.chr10 40874130 2 - 69331447 AA i canFam3.chr10 C 0 C 0 e mm10.chr15 77113097 487 + 104043685 I a score=335129.000000 s hg38.chr22_KI270876v1_alt 98906 96 + 263666 -TTAGGATACTTTTATGCAGGCTTG-AAAACAGC-TTATGTTTTCTGAATACTTGCTATTTAAAATAACATAAAACTCAAAAAGAAATCAAGCACACTT s panTro4.chr22 34476859 96 + 49737984 -TTAGGATACTTTTATGCAGGCTTG-AAAACAGC-TTATGTTTTCTGAATACTTGCTATTTAAAATAACATAAAACTCAAAAAGAAATCAAGCACACTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30892881 96 + 46535552 -TTAGGATACTTTTATGCAGGCTTG-AAAACAGC-CTATGTTTTCTGAATACTTGCTATTTAAAATAACATAAAACTCAAAAAGAAATCAAGCACACTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100445528 96 - 115148730 -TTAGGATACTTTTATGCAGGCTTG-AAAACAGC-TTATGTTTTCTGAATACTTGCTATTTAAAATAACATAAAACTCAAAAAGAAATCAAGCACACTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80593503 96 + 95678458 -TTAGGATACTTTTATGCAGGCTTG-AAAACAGT-TTATGTTTTCTGAATACTTGCTATTTAAAAGAACACAAAACTCAAAAAGAAATCAAGCACACTT i rheMac3.chr10 I 211 C 0 s macFas5.chr10 81020320 96 - 96509753 -TTAGGATACTTTTATGCAGGCTTG-AAAACAGT-TTATGTTTTCTGAATACTTGCTATTTAAAAGAACACAAAACTCAAAAAGAAATCAAGCACACTT i macFas5.chr10 I 1 C 0 s papAnu2.chr10 76277932 96 + 90941950 -tTAGGATACTTTTATGCAGGCTTG-AAAACAGT-TTATGTTTTCTGAATACTTGCtatttaaaagaacacaaaactCAAAAAGAAATCAAGCACACTT i papAnu2.chr10 I 213 C 0 s chlSab2.chr19 18547219 96 + 33263144 -TTAGGATACTTTTATGCAGGCCTG-AAAACAGT-TTATGTTTTCTGAATACTTGCTATTTAAAAGAACACAAAACTCAAAAAGAAATCAAGCACACTT i chlSab2.chr19 I 221 C 0 s calJac3.chr1 198250465 95 + 210400635 -ATAGGATACTTTTATGCAGGCTTG-AAAACAGC-TTATGTTTTCTGAATAGTTGGTATTTAAAAGAACACAAAACT-AAAAAGAAATCAAGCACACTT i calJac3.chr1 I 1 C 0 s canFam3.chr10 40874132 87 - 69331447 GGGAGGATACTTTT-TGCAGGCTTGAAAAACAGCTTTAAGTTTTCTGATTACTTACTACTTAAAA-----------CTAAAAGGAAACCAGACACCCTT i canFam3.chr10 C 0 C 0 e mm10.chr15 77113097 487 + 104043685 I a score=1835770.000000 s hg38.chr22_KI270876v1_alt 99002 523 + 263666 GACACTGAAATGGAGCTTACCTTAGAGCCACGTTCATTAAAGATTATTTCTACATCTAGGATTTTGCCAAACTGCTGCAGAGATAAAAATAAAAACGTTTACTTATGGTCAGGTTTTTATCCACATA---------TTTTGTTATCTTCTGAAATGGGAATAGTTTATTTTTCTTCTTCAGTAAACTA---CTTATTTAACTTCTATGTTTGTATTTGTTAGTAAGTTCCAATACCAGTTTCTGATTTTTCCTCGTCACTGAG--------CTGACAG---------------------------------TTTATCCACCTGTGTGTGTGGAAGC-TGTTGTCCAAAGTTATTCACAGTGTTAGCCCATTAGATACTTCATGTGGACAAGAACCTGGAATTTTCCTAACTACATCTC---TTAGTTTTTAGAACAGTCTCAGATTTAAAAAGCAA-----------ATCCTAGTAAGTAGAAT-AATATACTAT---AGAAGGCTG---------TTACCCTCC-TTTTTTTTACACAAGCAAA-----GTATATTCA--------CTATATaaaaagcagaaaatataaac-aaaaggaaaagggaaaacagaaaat s panTro4.chr22 34476955 553 + 49737984 GACACTGAAATGGAGCTTACCTTAGAGCCACGTTCATTAAAGATTATTTCTACATCTAGGATTTTGCCAAACTGCTGCAGAGATAAAAATAAAAACGTTTACTTATGGTCAGGTTTTTATCCACATA---------TTTTGTTCTCTTCTGAAATGGGAATCGTTTATTTTTCTTCTTCAGTAAACTA---CTTATTTAACTTCTATGTTTGTATTTGTTAGTAAGTTCCAATACCAGTTTCTGATTTTTCCTCGTCACTGAG--------CTGACAGTTTCTCC-TTTCTCAGTTCACTCACTCAGGCAATTTATCCACC--TGTGTGTGGAAGC-TGTTGTCCAAAGTTATTCACAGTGTTAGCCCACTAGATACTTCATGTGGACAAGAACTTGGAATTTTCCTAACTACATCTC---TTAGTTTTTAAAACAGTCTCAGATTTAAAAAGCAA-----------ATCCTAGTAAGTAGAAT-AATATACTAT---AGAAGGCTG---------TTACCCTCC-TTTTTTTTATACAAGCAAA-----GTATATTCA--------CTATGTAAAAAGTAGAAAATATAAAC-AAAAGGAAAAGAGAAAACAGAAAAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30892977 555 + 46535552 GACACTGAAATGGAGCTTACCTTAGAGCCACGTTCATTAAAGATTATTTCTACATCTAGGATTTTGCCAAACTGCTGCAGAGATAAAAATAAAAACATTTACTTATGGTCAGGTTTTTATCCACATA---------TTTTGTTCTCTTCTGAAATGGGAATAGTTTATTTTTCTTCTTCTGTAAACTA---CTTATTTAACTTCTATGTTTGTATTTGTTAGTAAGTTCCAATACCAGTTTCTTATTTTTCCTCGTCGCTGAG--------CTGACAGTTTCTCC-TTTCTCAGTTCACTCACTCAGGCAATTTATCCACCTCTATGTGTGGAAGC-TGTTGTCCAAAGTTATTCACAGTGTTAGCCCATTAGATACTTCATGTGGACAAGAACTCGGAATTTTCCTAACTACATCTC---TTAGTTTTTAAAACAGTCTCAGATTTAAAAAGCAA-----------ATCCTAGTAAGCAGAAT-AATATACTAT---AGAAGGCTG---------TTACCTTCC-TTTTTTTAATACAAGCAAA-----GTATATTCA--------CTATATAAAAAGCAGAAAATATAAAC-AAAAGGGAAAGGGAAAACAGAAAAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100445624 555 - 115148730 GACATTGAAATGGAGCTTACCTTAGAGCCACGTTCATTAAAGATTATTTCTACATCTAGGATTTTGCCAAACTGCTGCAGAGATAAAAATAAAAACATTTACTTATGGTCAGGTTTTTATCCACATA---------TTTTGTTCTCTTCTGAAATGGGAAGAGTTTATTTTTCTTCTTCTGTAAACTA---CTTATTTAACTTCTATGTTTGTATTTGTTAGTAAGTTCCAATACCAGTTTCTGATTTTTCCTCGTCGCTGAG--------CTGACAGTTTCTCC-TTTCGCAGTTCACTCACTCAGGCAATTTATCCACCTCTAGGTGTGGAAGC-TGTTGTCCAAAGCTATTCACAGTGTTAGCCCATTAGACACTTCATGTGGACAAGAACTTGGAATTTTCCTAACTACATCTC---TTAGTTTTTAAAACAGTCTCAGATTTAAAAAGCAA-----------ATCCTAGTAAGTAGAAT-AATATACTAC---AGAAGGCTG---------TTCCCCTCC-TATTTTttatacaagcaaa-----gtatattca--------ctatataaaaagcagaaaatatgaac-aaaaggaaaagggaaaacagaaaat i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80593599 551 + 95678458 GACACTGAAATGGAGCTTACCTTAGAGCCACGTTCATTAAAGATTATTTCTACATCTAGGATTTTGCCGAACTGCTGCAGAGATAAAAATAAAAACATTTACTTATGGTCAGGTTTTTATCCACATA---------TTTTGTTCTCTTCTGAAATGGGAATAGTTTATTTTTCTTCTTCTGTAAACTC---CTTATTTAACTTCTATGTTTGTATTTGTTAGTAAGTTCCAATAGCAGTTTCTGATTTTTCCTCATTGCTGAG--------CTGACAGTTTCTCC-TTTCTCAGTTCACTCACTCAGGCAATTTATCCACCTCTCTGTGTGGAAGC-TGTTGTTGAAAGTTATTCACAGTGTTAGCCCATTAGATGTTGTATGGGGACAAGAACTTGGAATTTTCCTAACTACATCTCT--TTATTTTTTAAAACAGTCTC--ATTTGAAAAGCAA-----------ATCCTAGTAAGTAGAAT-AATATACTAT---AGAAGGCTA---------TTCCCCTCCTTTTTTTTAATA----CAAA-----GTATATTCA--------CTATATGAAAAGCAGAAAACATAAAC-AAAAGGAAAAGGGAAAACAGAAAAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81020416 550 - 96509753 GACACTGAAATGGAGCTTACCTTAGAGCCACGTTCATTAAAGATTATTTCTACATCTAGGATTTTGCCAAACTGCTGCAGAGATAAAAATAAAAACATTTACTTATGGTCAGGTTTTTATCCACATA---------TTTTGTTCTCTTCTGAAATGGGAATAGTTTATTTTTCTTCTTCTGTAAACTC---CTTATTTAACTTCTATGTTTGTATTTGTTAGTAAGTTCCAATAGCAGTTTCTGATTTTTCCTCATTGCTGAG--------CTGACAGTTTCTCC-TTTCTCAGTTCACTCACTCAGGCAATTTATCCACCTCTCTGTGTGGAAGC-TGTTGTTGAAAGTTATTCACAGTGTTAGCCCATTAGATGTTGTATGGGGACAAGAACTTGGAATTTTCCTAACTACATCTCT--TTATTTTTTAAAACAGTCTC--ATTTGAAAAGCAA-----------ATCCTAGTAAGTAGAAT-AATATACTAT---AGAAGGCTA---------TTCCCCTCC-TTTTTTTAATA----CAAA-----GTATATTCA--------CTATATGAAAAGCAGAAAACATAAAC-AAAAGGAAAAGGGAAAACAGAAAAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76278028 551 + 90941950 GACACTGAAATGGAGCTTACCTTAGAGCCACGTTCATTAAAGATTATTTCTACATCTAGGATTTTGCCAAACTGCtgcagagataaaaataaaaacatttacttaTGGTCAGGTTTTTATCCACATA---------TTTTGTTCTcttctaaaatgggaatagtttatttttcttcttctgtaaactC---CTTATTTAACTTCTatgtttgtatttgttagtaAGTTCCAATAGCAGTTTCTGATTTTTCCTCATTGCTGAG--------CTGAcagtttctcc-tttctcagttcACTCACTCAGGCAATTTATCCACATCTCTGTG-GGAAGC-TGTTGTCGAAAGTTATTCACAGTGTTAGCCCATTAGATGTTGTATGGGGACAAGAACTTGGAATGTTCCTAActacatctct--ttattttttaaaacagtctcAGATTTGAAAAGCAA-----------ATCCTAGTAAGTAGAAT-AATATACTAT---AGAAGGCTA---------TTCCCCTCC-tttttttAATA----CAAA-----GTATATTCA--------CTATATgaaaagcagaaaacataaac-aaaaggaaaagggaaaacagaaaat i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18547315 553 + 33263144 GACACTGAAATGGAGCTTACCTTAGAGCCACGTTCATTAAAGATTATTTCTACATCTAGGATTTTGCCAAACTGCTGCAGAGATAAAAATAAAAACATTTACTTATGGTCAGGTTTTTATCCACATA---------TTTTGATCTCTTCTGAAATGGGAATAGTTTATTTTTCTTCTTCTGTAAACTC---CTTATTTAACTTCTATGTTTGGATTTGTTAGTAAGTTCCAATACCAGTTTCTGATTTTTCCTCATCGCTGAG--------CTGACAGTTTCTCC-TTTCTCAGTTCACTCACTCAGGCAATTTATCCACCTCTCTGTGTGGAAGC-TGTTGTCGAAAGTTATTCACAGTGTTAGCCCATTAGATGTTGTATGGGGACAAGAACTTGGAATTTTCCTAACTACATCTCT--TTATTTTTTAAAACAGTCTCGGATTTGAAAAGCAA-----------ATCCTAGTAAGTAGAAT-AATATACTAT---AGAAGGCTA---------TTCCCCTCCTTTTTTTAAATA----CAAA-----GTATATTCA--------CTATATgaaaagcagaaaacataaac-aaaaggaaaagggaaaacagaaaat i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198250560 549 + 210400635 GATATTGAAATGGAGCTTACCTTAGAGCCTCGTTCATTAAAGATTATTTCTACATCTAGGATTTTGCCAAACTGCTGCAGAGATAAAAATAAAAACATTTACTTATGGTCAGATTTTTATCCATATA---------TTTTGCTCTCTCCTGAAATGGGAATAGTTTATTTTTCTTCTTCTGTTAACTA---TTTATTTAACTTCTATGTTTGTATTTGTTGGTAAGTTCCAATACTAGGTTCTGATTTTTTCTCATCACTGAG--------TTGACAGTTTCTCCTTTTCTCACTTCACTCACTCAGGCAA-TCATCCACCTCTATGTGTGGAAGCGTGTTGTCCAAAGATATGTACAGTGTAAGCCCACTAGATCCTTCATGTGGACAAGAAGTTGGAATTTTCCTAACTACATTGC-----ATTTTTTAAAACAGTCTCAAATTTAAAAAG----------------TCTAGTAAGTAGAAT-AATATACTAT---AGGAAACTG---------TTCCCCTCC-TGTTTTT-ATACAAGCAAA-----GTATATTCA--------CTATATAAAAAGCAGTAAATAAAAACAAAAAGGAAAAGGGAAAACAGAAAAT i calJac3.chr1 C 0 C 0 s mm10.chr15 77113584 526 + 104043685 GGTACAGACACAGGGCTTACCTTGGAGCCGCGCTCATTAAAGATTATTTCCACATCTAGGATTTTGCCAAACTGCTGCAGAGACAAAAACATAAACATTTATTTAAGGTTAG-CCTTTGCCTAGACATTAGCCTTTTTTTTTTTTTTTCCGGAAGGAGA------CAACTTTTTTCTTCTTTGAACTAGTGCTCATTTAACTGC-AAGTTCGTACATGTCAG-GAGACCCAAAGTGCGCTCTGGAAAGCCCCTCCCCGGGGAGGGGCAGGACTTATGGTTTCTTC------------ATTCCCTCAGGCG---CATCCACGTCCACCTGTAGAAGC-CACTGTCTGAGGAC-TGCAC---------------------CTGTGTCGCCAAG-GCCTGGCCCCTTTCTAACTACTGCCTTAATTATTTT--------GTCTCAATTGTAAAAAAAAATAAAAAGTTCTATCTTACCAAGCAGAATCAGTACACTGTCAGGGAGGTCTG---------CTCCCATCC-CGTCTCCCTTA-----AAA-------------A--------TTATACAAAATTCAGGTAATATAAAC-ACCATGGAAAAAGAAAGCAGAAAAT i mm10.chr15 I 487 C 0 s canFam3.chr10 40874219 432 - 69331447 AATACTGAGATGGAGCTTACCTTAGAGCCACGTTCATTAAAGATAATTTCTACATCTAGGATTTTGCCAAACTGCTGCAGAGACAAAAATAAAAACATTTATTCAGGATCAGCTTCTTATCCACATA---------CTTTATTTTCTCCTGAAAAATGAGTAGTTTTTTTTTTTTC--CTTTTAACTA---CTTATTCAATTTCCATGTTTCTATTTGTTGGTAGTCCCCAATACCAGTTTCTGATTTCCCCTCATTAATGAG--------CCAATAATTTCTCC-TT-----------------------------------------------C-T------------------------------------------------------------------------TAAATGTC---CCAGTTT-----------------TTAAGAAGCAA-----------ATCTG---AAGTAGAAA-GATACACTAT---AGAAGGCTGTGTTTTGCTTCTCCCTCT-Ttttttttttt----taaatttttatttatttatgatagtcctagagagagagagagaggcagagac-acaggcagagggagaagcaggctcc i canFam3.chr10 C 0 I 282 a score=33441.000000 s hg38.chr22_KI270876v1_alt 99525 10 + 263666 aaagataaTC s panTro4.chr22 34477508 10 + 49737984 AAAGATAATC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30893532 10 + 46535552 AAAGATAATC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100446179 10 - 115148730 aaagatcatc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80594150 10 + 95678458 AAAGATCATC i rheMac3.chr10 C 0 I 303 s macFas5.chr10 81020966 10 - 96509753 AAAGATCATC i macFas5.chr10 C 0 I 303 s papAnu2.chr10 76278579 10 + 90941950 aaagatcatc i papAnu2.chr10 C 0 I 309 s chlSab2.chr19 18547868 10 + 33263144 aaagaTCATC i chlSab2.chr19 C 0 I 300 s calJac3.chr1 198251109 10 + 210400635 AAAGATCATC i calJac3.chr1 C 0 C 0 s mm10.chr15 77114110 10 + 104043685 AGAAATCAAC i mm10.chr15 C 0 C 0 e canFam3.chr10 40874651 282 - 69331447 I a score=311798.000000 s hg38.chr22_KI270876v1_alt 99535 106 + 263666 TGCAATCCTATCATCGTAATGCTTTAGTACACAGCATTCCAGGCTTTCCCTCAGGCATGTAGAGATAAGTAACTATAGACATCAGA-TGCATTCTAT-AATTTGC-------TTT s panTro4.chr22 34477518 106 + 49737984 TGCAATCCTATCATCGTAATGCTTTAGTACACAGCATTCCAGGCTTTCCCTCAGGCATGTAGAGATAAGTAACTATAGACATCAGA-TGCATCCTAT-AATTTGC-------TTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30893542 106 + 46535552 TGCAATCCTATCATCGTAATGTTTTAGTACAGAGCATTCCAGGCTTTCCCTCAGGCATGTAGAGATAAGTAACTATAGAAATCAGA-TGCATTCTAT-AATTTGC-------TTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100446189 106 - 115148730 tgcaatcctatcatcgtaatgttttagtacacagcattccaggctttccctcaggcatgtaGAGATAAGTAACTATAGACATCAGA-TGCATTCTAT-AATTTGC-------TTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80594463 112 + 95678458 TGCAATCCTATCATCGATAGGTTTTAGTACACAGCATTCCAGGCTTTCCCTCAGGCATGTAGAGATAAGTAACCATAGACATCAGA-TACATTCTAT-AATTTGCTTGTTA-TTT i rheMac3.chr10 I 303 C 0 s macFas5.chr10 81021279 113 - 96509753 TGCAATCCTATCATCGATAGGTTTTAGTACACAGCATTCCAGGCTTTCCCTCAGGCATGTAGAGATAAGTAACCACAGACATCAGA-TACATTCTAT-AATTTGCTTGTTATTTT i macFas5.chr10 I 303 C 0 s papAnu2.chr10 76278898 115 + 90941950 tgcaATCCTATCATCGTAAGGCTTTAGTACATAGCATTCCAGGCTTTCCCTCAGGCATGTAGAGATAAGTAACCATAGACATCAGATTACATTCtataaatttgcttttttgttt i papAnu2.chr10 I 309 C 0 s chlSab2.chr19 18548178 113 + 33263144 TGCAATCCTATCATCGTAAGGTTTTAGTACACAGCATTCCAGGCTTTCCCTCAGGCATGTAGAGATAAGTAACTATAGACATCAGA-TACATTCTAT-AATTTGCTTTTTTGTTT i chlSab2.chr19 I 300 C 0 s calJac3.chr1 198251119 109 + 210400635 TGCAATCCTACCATCGTAATGTTTCAGTACACAGCATTCCAGGCTTTCCCTCAGGCATGTAGAGATACATAACAATTGACATCAAA-TATATTCTAT-ATATTGATTT----TTT i calJac3.chr1 C 0 C 0 s mm10.chr15 77114120 66 + 104043685 -----------------------------CATGGTCTTCCATGCTTTTCCTCAAACACACAGACAT-----------GGCACCAGA-TGCATGCCAC-ATACTGC-------TTT i mm10.chr15 C 0 I 9 e canFam3.chr10 40874651 282 - 69331447 I a score=732592.000000 s hg38.chr22_KI270876v1_alt 99641 257 + 263666 --------AAAAAAAAAAAAagatggagtcttgaactgtcacccaggctggagtccagtggcacgatcttggctctctgtaacctctgcctcctggattcaagctattctcctgcctcagcctcttgagtagctgtgattacaggtgcctgccaccacgtccagctaatttttgtatttttagtagagagggggtttcaccgtgttggccaggctggtctc-gaactcctgacttcatgtgatctgcctgcctcagcctgccaaag s panTro4.chr22 34477624 260 + 49737984 -----AAAAAAAAAAAAAAAagatggagtcttgaactgtcacccaggctggagtccagtggcacgatcttggctctctgtaacctctgcctcctgggttcaagctattctcctgcctcagcctcttgagtagctgtgattacgggtgcctgccaccacgtccagctaatttttgtatttttagtagagagggggtttcaccgtgttggccaggctagtctc-gaactcctgacttcatgtgatctgcccgcctcagcctgccaaag i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30893648 265 + 46535552 aaaaaaaaaaaaaaaaaaaaagatggagtcctgaactgtcacccaggctggagtccagtggcacgatcttggctctctgtaacctctgcctcctgggttcaagctattctcctgcctcagcctcctgagtagttgtgattacgggtgcctaccaccacgtccagctaatttttgtatttttagtagagtgggggtttcaccgtgttggccaggctggtctc-gaactcctgacttcatgtgatctgcctgccccagcctcccaaag i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100446295 265 - 115148730 aaaaaaaaaaaacaaaaaaaaCATAgagtcttgaactgtcacccaggctggagtccagtggcacgatcctggctcactgtaacctctgcctcctgcgttcaagctattctcctgcctcagtctcctgagtagctgtgattacgggtgcctaccaccacgcccagctaatttttgtatttttagtagagagggggtttcaccatgttggctaggctggtctc-gaactcctgacttcatgtgatctgcccgcctcggcctcccaaag i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80594575 249 + 95678458 --aaaaaaaaaaaaaaaaaaaaaaagagtcttgaactgtcacccaggctggagtccagtggcacgatcttggctcactgtaacctgtgcctccctggttcaagcaattctcttgcctcagc--------------ggattacgagtgcccgccaccacgcccagctaatttttgtatttttagtagagaggggcttttaccacgttgaccagcctggtctc-gaactcttgacttcatgtgatccgcccgcctcagcctcccaaag i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81021392 263 - 96509753 --aaaaaaaaaaaaaaaaaaaaaaagagtcttgaactgtcacccaggctggagtccagtggcacgatcttggctcactgtaacctgtgcctcctgggttcaagctattctcctgcctcagcctcccgagtagctgggattacgagtgcccgccaccacgcccagctaatttttgtatttttagtagagaggggcttttaccacgttgaccagcctggtctc-gaactcctgacttcatgtgatccgcccgcctcagcctcccaaag i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76279013 258 + 90941950 -------atttaaaataaaaaaaaagagtcttgaactgtcacccaggctggagtccagtggcacgatcttggctcactgtaacctgtgcctcctgggttcaagctattctcctgcctcagcctcctgagtagctgggattatgagtgcccgccaccacgcccagctaatttttgtatttttagtagagaggggctttcaccatgttgaccagcctggtctc-gaactcctgacttcatgtgatccgcccgcctcagcctcccaaag i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18548291 259 + 33263144 ------ATTTAAAAAAAAAAAAAAAgagtcttgaactgtcacccaggctagagtccagtggcacgatcttggctcactgtaacctgtgcctcctgggttcaagctattctcctgcctcagcctcccgagtagctgggattatgagtgcctgccaccacgcctagctaatttttgtatttttagtagagaggggctttcaccatgttgaccagcctggtctc-aaactcctgacttcatgtgattcgcccgcctcagcttcccaaag i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198251228 252 + 210400635 --------------AAAAAAagatggagtcttgttctgtcacccaggctggagtgcagtggcgcaatcttggctcattgtaacctctacctcctgagttcaagctattctcctggctcagcctcccaagtagctgggattacaggtgcccgccaccacagccagctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtctcaaaattcctgacttcatgtgatccgcccacctcagcctcccaaag i calJac3.chr1 C 0 C 0 e mm10.chr15 77114186 9 + 104043685 I e canFam3.chr10 40874651 282 - 69331447 I a score=98086.000000 s hg38.chr22_KI270876v1_alt 99898 32 + 263666 CATATATTGCTTTTA-----TTTTTTAACTTAGCAAT s panTro4.chr22 34477884 32 + 49737984 CATATATTGCTTTTA-----TTTTTTAACTTAGCAAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30893913 33 + 46535552 CATATATTGCTTTTAT----TTTTTTAACTTAGCAAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100446560 37 - 115148730 CATATATTGCTTTTATTTTATTTTTTAATTTAGCAAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80594824 33 + 95678458 CATATATTGCTTTTAT----TTTTTTAACTTAGCAAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81021655 33 - 96509753 CATATATTGCTTTTAT----TTTTTTAACTTAGCAAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76279271 33 + 90941950 catatattgcttttat----ttttttaacttagcaAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18548550 33 + 33263144 tATATATTGCTTTTAT----TTTTTTAACTTAGCAAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198251480 32 + 210400635 CATATACTGGTTTTA-----TTTTTTAACTTGGCAAT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40874933 30 - 69331447 TAAGTATTACTTTTTT----TTTTTAAACTTAAT--- i canFam3.chr10 I 282 C 0 e mm10.chr15 77114186 9 + 104043685 I a score=555075.000000 s hg38.chr22_KI270876v1_alt 99930 166 + 263666 AGATTGTGAACAACT-ATCCGAATC----AATATATAACTGTGTTACCACTTCTATAGGCTACATG-------------------------------------------------CTATTCACCAC-TTTAATATTTCTACAAT-AACATCAAGAATATTTTAAATAACCACTCTCTTTGGTAATTCTTTAAACATTTTAACATTCAGAAAAGCAAACAAAA s panTro4.chr22 34477916 166 + 49737984 AGATTGTGAACAACT-ATCCGAATC----AATATATAAC-GTGTTACCACTTCTATAGGCTACATG-------------------------------------------------CTATTCACCACTTTTAATATTTCTACAAC-AACATCAAGAATATTTTAAATAACCACTCTCTTTGGTAATTCTTTAAACATTTTAACATTCAGAAAAGCAAACAAAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30893946 166 + 46535552 AGATTGTGAACAACT-ATCCGAGTC----AATATATATCTGTGTTACCACTTCTATATGCTACATG-------------------------------------------------CTATTCACCAC-TTTAATATTTCTACAAC-AACATCAAGAATATTTTAAATAACACCTCTCTTTGGTAATTCCTTAAACATTTTAACATTCAGAAAAGCAAACAAAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100446597 166 - 115148730 AGATTGTGAACAACT-ATCCAAGTC----AATATATATCTGTGTTACCACTTCTATAGGCTACATG-------------------------------------------------CTATTCACCAC-TTTAATATTTCTACAAC-AACATCAAGAATATTTTAAATAACACCTCTCTTTGGTAATTCTTTAAACATTTTAACATTCAGAAAAGCAAACAAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80594857 167 + 95678458 AGATTATGAACAACT-ATCTAAGTC----AATATATATCTGTGTTACCACTTCTATAGGCTACATG-------------------------------------------------CTATTCACCAC-TTTAATATTTCTACAACAAACATCAAGAATATTTTAAATAACACCTCTCTTTAGTAATTCTTTAAACATTTTAACATTCAGAAAAGCAAGCAAAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81021688 167 - 96509753 AGATTATGAACAACT-ATCTAAGTC----AATATATATCTGTGTTACCACTTCTATAGGCTACATG-------------------------------------------------CTATTCACCAC-TTTAATATTTCTACAACAAACATCAAGAATATTTTAAATAACACCTCTCTTTAGTAATTCTTTAAACATTTTAACATTCAGAAAAGCAAGCAAAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76279304 167 + 90941950 AGATTATGAACAACT-ATCTAAGtc----aatatatatatgtgttacCACTTCTATAGGCCACATG-------------------------------------------------CTATTCACCAC-CTTAATATTTCTACAACAAACatcaagaatattttaaataacacctCTCTTTAgtaattctttaaacattttaacattcagaaaagcaagcaaaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18548583 167 + 33263144 AGATTATGAACAACT-ATCTAAGTC----AATATATATCTGTGTTACCACTTCTATAGGCTACATG-------------------------------------------------CTATTCACCAC-TTTAATATTTCTACAACAAACATCAAGAATATTTTAAATAACACCTCTCTTTAGTAATTCTTTAAACATTTTAACATTCAGAAAAGCAAACAAAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198251512 167 + 210400635 AGATTATGAATAACT-ATCCAAGTC----AATATGTATCTGTGCTACCACTTCCATAGGCTACATG-------------------------------------------------CTAGTCACCAT-TTAAATATTCTGACAATAAACATCAAGCATATTTTAAATAACAGCTCTTTTTATTAATTCTTTAAATATTTTGACATTCAGAAAAGCAAACAAAA i calJac3.chr1 C 0 C 0 s mm10.chr15 77114195 204 + 104043685 AAACTGTGGATGACTGACCCCAATA----AATATGTATT--TGTTGCAATTTCTATAGGTGACACAACG--CTCTGTCACTCTTAAA-ACAGCTGGACATTAA----GACCCCACTTACTTGCCAT-CTTAATAGTTCTGTAACAGATACCAGGAACATTTTAAAGTAACAATCTGTTCAGCAATTATTTAACTATTTCAGAGCT----AAAGGATACAAAA i mm10.chr15 I 9 I 701 s canFam3.chr10 40874963 209 - 69331447 ATGCCATAAACAGCT-TGCCAAGTCAATAAATACGTATCTGTGTTCTCATTTCTACAAACTACATGCCGTTTTCCATTGTACTTAAACATTCAAGGACATTACACATGATTTCATTTATTTTCCCT-TTTAATATTTTGGCAATGAACATCAAGAACATTTTAAGTAATATCTTTGTTTTGTAA----TTAAATATTTTAACATTTGGGAAATAA------- i canFam3.chr10 C 0 C 0 a score=1770556.000000 s hg38.chr22_KI270876v1_alt 100096 525 + 263666 ACTAAAGACACGAAGCCTAAACTCTACTGTTAGGTAGCTAAATAGCTGACTAGA-GGGTTACACA--AAACACAATGATTATTTAGGGGGAAAGTATATA-TAAAAAGAGACAAAA----CTGTTTTAATCAATGCTTGGATGAAATGAATTGAAGGTATATGCAGAAAATTTCCAGATATCTTTTTGGCTTATATTTCCCTCTGAGTATTGGAGTCATA---CCTGATTATCTACTTCACTTGGGTTTCAAACCAGACTTTGGGAAATGTGAAAAAAAACTGAAAAATGGAAAGAGCAAAACAGAAATCATGCTGTTCCATTGGACTGAATCACCTACTATCTTTATCAAAAAACTTGTATTAATAACCCAAGTTTTCTACAGTAAGACATCTTGGTTTGGT--------------TTAATAGAA-------GA-ATCACGGAAAAAGGAAAATGTTTTATTTTAGATGGGAGGGCATT------------TATGCTTATCCTATAAAACTAAGatttgtatggtgcttt-ggagtttgttttgttttatattttctaatgcattcttat s panTro4.chr22 34478082 523 + 49737984 ACTAAAGACA--AAGCCTAAACTCTACTGTTAGGTAGCTAAATAGCTGACTAGA-GGGTTACACA--AAACACAATGATTATTTAGGGGGAAAGTATATA-TAAAAAAAGACAAAA----CTGttttaatcaatgcttggatgaaatgaattgaaggtatatgcagaaaatttccagatATCTTTTTGGCTTATATTTCCCTCTGAGTATTGGAGTCATA---CCTGATTATCTACTTCACTTGGGTTTCAAACCAGACTTTGGGAAATGTGAAAAAAAACTGAAAAATGGAAAGAGCAAAACAGAAATCATGCTGTTCCACTGGACTGAATCACCTACTATCTTTATCAAAAAACTTGTATTAATAACCCAAGTTTTCTACAGTAAGACATCTTGGTTTGGT--------------TTAATAGAA-------GA-ATCACGGAAAAAGGAAAATGTTTTATTTTAGATGGGAGGGCATT------------TATGCTTATCCTATAAAACTAAGatttgtatggtgcttt-ggagtttgttttgttttatattttctaatgcattcttat i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30894112 525 + 46535552 ACTAAAGACTCAAAGTCTAAACTCTATTGTTAGGTAGCTAAATAGCTGACTAGA-GGGTTACACA--AAACACAATGATTATTTAGGGGGAAAGTATATA-TAAAAAGAGACAAAA----CTGttttcatcaatgcttggatgaaatgaattgaaggtatatgcagaaaatttccagatATCTTTTTGGCTTATATTTCCCTCTGAGTATTGGAGTCATA---CCTGATTATCTACTTCACTTGGGTTTCAAACCAGACTTTGGGAAATGTGAAAAAAAACTGAAAAATGGAAAGAGCAGAACAGAAATCACGCTGTTCCATTGGACTGAATCACCTACTATCTTTATCAAAAAACTTGTATTAATAACCCAAGTTTTCTACAGTAAGACATCTTGGTTTGGT--------------TTAATAGAA-------AA-ATCATGGAAAAAGGAAAATGTTTTATTTTAGATGGGAGGGCACT------------TATGCTTATCCTATAAAACTAAGatttgtatagtgcttt-ggagtttgttttgttttatattttctaatgcattcttat i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100446763 522 - 115148730 ACTAAAGACACAAAACCTAAACTCTATTGTTAGGTAGCTAAATAGCTGACTAGA-GGGTTACACA--AAACACAATGATTATTTAGGGGGAAAGTATATA-TAAAAAGAGACAAAA----CTGttttaatcaatgcttggatgaaatgaattgaaggtatatgcagaaaatttccagatATCTTTTTGGCTTATATTTCCCTCTGAGTATTGGTGTCATA---CCTGATTATCTACTTCACTTGGGTTTCAAACCAGACTTTGGGAAATGTGAAAAAAAACTGAAAAATGGAAAGAGCAAAACAGAAATCATGCTGTTCCATTGGACTGAGTCACCTACTATCTTTATCAAAAAACTTGTATTAATAACCCAAGTTTTCTACAGTAAGACATCTTGGTTTGGT--------------TTAATAGAA-------AA-ATCATGGAAAAAGGAAAATGTTTTATTTTAGATGGGAGGGCATT------------TATGCTTATCCTATAAAACTAAGATTTGTATGGTGCTCT-GGAGTTTGTTTTGTTTTATATTTTCTAATGCATTCT--- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80595024 520 + 95678458 ACTAAAGACACAAAGCCTAAACTCTATTGTTATGTAGCTAAATAGCCGACTAGA-GGGTTACACA--AAACACAATCATTATTTAGGGGGAAAG--TATA-TAAAAAGAGACAAAA----CTG-TTTAATCAATGCTTGGATGAAATGAATTGAAGGTACATGCAGAAAATTTCCAGATATCTTTTTGGCTCATATTTCCCTCTGAGTATTGGAGTCATA---CCTGATTATCTACTTCACTTGGGTTTCAAAGCAGACTTTGGGAAATGTG-AAAAAAACTGAAAAAGGGAAAGAGCAAAACAGAAATCATGCCGTTCCACTGGATTCAATCA-TTACTATCTTTATCAAAAAACTTGTATTAATAACCCAAGTTTTCTACAGTAAGACATCTTGGTTTGGT--------------TTAATAGAA-------AA-ACCATGGAAAAAGGAAAATGTCTTATTTTACATGGGAGGACATT------------TATGCTTATCCTATAAAACTAAGatttgcatggtgcttt-ggagtttgttttgttttatattttctagtgcattcttat i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81021855 521 - 96509753 ACTAAAGACACAAAGCCTAAACTCTATTGTTATGTAGCTAAATAGCCGACTAGA-GGGTTACACA--AAACACAATCATTATTTAGGGGGAAAG--TATA-TAAAAAGAGACAAAA----CTGTTTTAATCAATGCTTGGATGAAATGAATTGAAGGTACATGCAGAAAATTTCCAGATATCTTTTTGGCTCATATTTCCCTCTGAGTATTGGAGTCATA---CCTGATTATCTACTTCACTTGGGTTTCAAAGCAGACTTTGGGAAATGTG-AAAAAAACTGAAAAAGGGAAAGAGCAAAACAGAAATCATGCCGTTCCACTGGATTCAATCA-TTACTATCTTTATCAAAAAACTTGTATTAATAACCCAAGTTTTCTACAGTAAGACATCTTGGTTTGGT--------------TTAATAGAA-------AA-ACCATGGAAAAAGGAAAATGTCTTATTTTACATGGGAGGACATT------------TATGCTTATCCTATAAAACTAAGATTTGCATGGTGCTTT-GGAGTTTGTTTTGTTTTATATTTTCTAGTGCATTCTTAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76279471 521 + 90941950 actAAAGACACAAAGCCTAAACTCTATTGTTATGTAGCTAAATAGCCGACTAGA-GGGTTACACA--AAACACAATCATTATTTAGGGGGAAAG--tata-taaaaagagacaaaa----ctgTTTTAATCAATGCTTGGATGAAATGAATTGAAGGTACATGCAGAAAATTTCCAGATATCTTTTTGGCTCATATTTCCCTCTGAGTATTGGAGTCATA---CCTGATTATCTACTTCACTTGGGTTTCAAAGCAGACTTTGGGAAAtgtg-aaaaaaactgaaaaagggaaagAGCAAAACAGAAATCATGCCGTTCCACTGGATTCAATCA-TTACTATCTTTATCAAAAAACTTGTATTAATAACCCAAGTTTTCTACAGTAAGACATCTTGGTTTGGT--------------TTAATAGAA-------AA-AccatggaaaaaggaaaatgtcttattttacatGGGAGGGCACT------------TATGCTTATCCTATAAAACTAAGATTTGCATGGTGCTtt-ggagtttgttttgttttatattttctaatgcaTTCTTAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18548750 523 + 33263144 ACTAAAGACACAAAGCCTAAACTCTACTGTTATGTAGCTAAATAGCCGACTAGA-GGGTTACAGA--AAACACAATCATTATTTAGGGGGAAAGTATATA-TAAAAAAAGCCAAAA----CTGTTTTAATCAATGCTTGGATGAAATGAATTGAAGGTACATGCAGAAAATTTCCAGATATCTTTTTGGCTCATATTTCCCTCTGAGTATTGGAGTCATA---CCTGATTATCTACTTCACTTGGGTTTCAAAGCAGACTTTGGGAAATGTG-AAAAAAACTGAAAAAGGGAAAGAGCAAAACAGAAATCATGCTGTTCCATTGGATTCAATCA-TTACTATCTTTATCAAAAAACTTGTATTAATAACCCAAGTTTTCTACAGTAAGACATCTTGGTTTGGT--------------TTAATAGAA-------AA-CCCATGGAAAAAGGAAAATGTCTTATTTTACATGGGAGGGCATT------------TATGCTTATCCTATAAAACTAAGatttgcatggtgcttt-ggagtttgttttgttttatattttctaatgcattcttat i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198251679 516 + 210400635 ACTAAAGACACAAAGCCTAAACTCTATTGTTAGGTAGCTAAATAGCTGTGTAGAGGGGTTACAAG--AAATACAGTAACTATTTAGGGGGAAAGTATATATTAAAAAAAGACAAAA----CTGTTTTAATCAATGCTTGGATGAAATGAACTGAAGGTATATGCAGAAAATTTCCAGATATCTTTCTGGCTCATATTTCCCTCTGAGTATTGTAGTCATCATTCCTGATTATCTACTT--------TTTCAAACCTAACTTTGGGAAATGTG-AAAAAAACTGAAAAATAGAAAGAGCAAAACAGAAATCATGCTGTTCTACTGAACTGAATCA-TTACTATCTTTATCAAAAAACTTGTATTAATAACCCAAGTTTTCTACAGTAAGACATATTGATTTGGT--------------TTAATAAAA-------AACATCATGAAAAACAGAAAATGTCTTATTTTGGATGGAAGGGCATT------------TATGCTTATCCTATAAAACGAAGatctgtatggttcttt-ggag-----tttgttttatattttctaatgcattctgat i calJac3.chr1 C 0 C 0 s canFam3.chr10 40875172 552 - 69331447 GCTAAAAATATGAAGCCTAAG--TAACTGTTTGTAGGTCCAACAGCTGACTAGA-GGAGCATACATTGAACACAGTGGTTATTCGGAGGAAAGG--CATG-TAGAAGGTGACAAGACCATCTGTTAGAATCAATGTGTGGATGAACTGAATTGAAGGAATGTGCAT-TAATCTCCAGATAGCTTTTTGGCCC-CACTTCCTTCTGACTACTGGACTCATAGG-CCCAATTATCTATGTCACTTGGATTGCAAGTCAGACTTCGGGAAATGTG--AAAAAACTAAAAAATGAAAAGTGCAAAAC--AAATCCTGCTTTCTCACTGGGCTGAATCA-TTACTATCTTTTTCAGAAAACATGTACtaagagcccaagttttctagagtaagacttctgggcttgattccagttccattacttaACAGAACATTAGGAA-ATAAAGGAAAGAGGAAAATGTCTTATTTTAGGTAGGAGGGCATTTAGTTTTATTTCTATGCCTATCC-AAACAACTGAGATTTGAATGGAGTTTTAAGAGTT---TTCCTTTTACATTTTCTAATGTGTCCTTAT i canFam3.chr10 C 0 C 0 e mm10.chr15 77114399 701 + 104043685 I a score=2595906.000000 s hg38.chr22_KI270876v1_alt 100621 725 + 263666 aatatccttctggagtaaggatcacactccttttatggttaagacgaatgaggctaaaagaagctatttgtcaagtttatgaagctaatgaaatggagcatgg-atGCCTGCTCTTTACCAACGTTACTGTTCTTCTAAGTAACAGAGAGTC-ACAATGTGGAAGAAAATAAAGCAAC-----TAGGTATCTCTGGTAAGG-AAAAAATTATTTC---------------------TTTTGCACTTTAT-GCCTTATGAGAAGGGCATAATACATTTCAAGAAGTCAC---TAACTGGCCTAGGCAGATCTGCAATGGACACTATTTCTCTGACTCAAGAGAAAACAcacttctggcagatgagaatgtactccattctcacagacctccagagactaagattttatataagctctaataattcagtagagaacctaataactcATGCTCCcgagaagtttcttc---t---gcgtaacccaagtcctttatgc-tgcccttt--attttctgttgctctcttctcagaaaaaatggaaaatatctggttaccattttctgtgtaaaagctcttcaaatacttcaagaacatcattaaatctcaactctggccttctcttTAGTGCGGAAAATACATCCAAGTAGTCAGCTATAAATGACAGAATTTTGCCCCAGTGTCTTGTCACCGTGAAGTGGCCACAACCAAGACTTAAAGAAGAGCATCTGCTTTTCTAATAAAGTACCA-GGCAGCTATCCTAGTGGAATTT s panTro4.chr22 34478605 726 + 49737984 aatatccttctggagtaaggatcacactccttttatggttaagaagaatgaggctaaaagaagctatttgtcaagtttatgaagctaatgaaatggagcatgg-atGCCTGCTCTTTACCAATGTTACTGTTCTTCTAAGTAATAGAGAGTC-ACAATGTGGAAGAAAATAAAGCAAC-----TAGGTATCTCTGGTAAGG-AAAAAATTATTTC---------------------TTTTGCACTTTAT-GCCTTATGAGAAGGGCATAATACATTTCAAGAAGTCAC---TAACTGGCCTAGGCAGATCTGCAATGGACACTATTTTTCTGACTCAAGAGAAAACACACTTCTggcagatgagaatgtactccattctcacagacctccagagactaagattttatataagctctaataattcagtagagaacctaataactcatgctcccaagaagtttcttc---t---gcgtaacccaagtcctttatgcttgtccttt--attttctgttgctctcttctcagaaaaaatggaaaatatctggttaccattttctgtgtaaaagctcttcaaatacttcaagaacatcattaaatctcaactctggccttctcttTAGTGCGGAAAATACATCCAAGTAGTCAGCTATAAATGACAGAATTTTGCCCCAGTGTCTTGTCACCATGAAGTGGCCACAACCAAGACTTAAAGAAGAGCATCTGCTTTTCTAATAAAGTACCA-GGCAGCTATCCTAGTGGAATTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30894637 725 + 46535552 aatatccttctggagtaaggatcacactccttttatggttaagaagaatgaggctaaaagaagctatttgtcaagtttatgaagctaatgaaatggAGCATGG-ATACCTGCTCTTTACCAATGTTACTGTTCTTCTAAGCAATAGAGAGTC-ACAATGTGGAAGAAAATAACGCAAC-----TAGGTATCTCTGGTAAGG-AAAAAATTATTTC---------------------TTTTGCACTTTAT-GCCTTATGAGAAGGGCATAATACATTTCAAGAAATCAC---TAACTGGCCTAGGCAGATCTGCAACGGACACTATTTTTCTGACTCAAGAGAAaacacacttctggcagatgagaatgtactccattctcatagacctccagagactaagattttatataagctctgataattcagtagagaacctaataactcatgctcccaagaagtttcttc---t---gcgtaacccaagtcctttatgc-tgcccttt--attttctgttgctctcttctcggaagaaatggaaaatatctggttaccaatttctgtgtaaaagctcttcaaatacttcaagaacatcattaaatctcaactctggccttctcttTAGTGTGGAAAATACATCCAAGTAGTCAGCTATAAATGACAGAATTTTGCCCCAGTGTCTTGTCACCATGAAGTGGCCACAACCAAGACTTAAAGAAGAGCATCTGCTTTTCTAATAAAGTACCA-GGCAGCTATCCTAGTGGAATTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100447285 721 - 115148730 --TATCCTTCTGGAGTAAGGATCACACTCCTTTTATGGTTAAGAAGAATGAGGCTAAAAGAAGCTATTTGTCAAGTTTATGAAGCTAATGAAATGGAGCATGG-ATGCCTGCTCTTTACCAATGTTACTGTTCTTCTAAGTAATAGAGAGTC-ACAATGTGGAAGAAAATAGGGCAAC-----TAGGTATCTCTGGTAAGGAAAAAAATTATTTC---------------------TTTTGCACTTTAT-GCCTTATGAGAAGGGCATAATACATTTTAAGAAATCGC---TAACTGGCCTAGGCAGATCTGCAATGGACACTATTCTTCTGACTCAAGAGAAAACACACCTCTggcagatgcgaatgtactccattctcatagacttccagagacaaagattttatataagctctgataattcagtagagaacctaataactcatgctcccgagaagtttcttc---t---gcgtaacccaaggcctttatgc-tgcccttt--attttctgttgctctcttctcggaagaaatggaaaatatctggttaccattttctgtgtaaaagctcttcaaatacttcaagaacatcattaaatctcaactctggcctgctcttTAGTGTGGAAAATACATCCAAGTAGTCAGCTATAAATGACAGAATTTTGCCCCAGTGTCTTGTCACCATGAAGTGGCCACAACCAAGACTTA---AAGAGCATCTGCTTTTCTAATGAAGTACCA-GGCAGCTATCCTAGTGGAATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80595544 712 + 95678458 aatatccttctggagtaaggatcacattccttttatggttaaggagaacgaggctaaaagacgctattcgtcaagtttatgaagctaatgaaatggAGCGTGGAATGCCTGCTCTTTACCATGGCTACTGTTCTTCTAAGTAATAGAGAGTC-ACAATATGGAAGAAAATAAAGCAAC-----TAGGTATCTCTGGTAAGG-AAAAAGTTATTTC---------------------TTTTGCACTTTAT-GCCTTATGAGAAGGGCATAATACATTTCAAGAAATCAC---TAACTGGCCCAGGCAGATCTGCAATGGACGCTATTTTTCTGACTCAAGAGAAAACAAACCTCTggcagatgagaatgtactccattctcacagacctccagagactaagattttatataagttctgataattcagtagagagcctaataactcaggctcccgagaagtttcttc---t---gcataacccaagtcctttatgc-tgcccttt--attttctgttgttctcttctctgaagaaatggaaaatatctggttaccactttctgtgt-aaagctctccaaatacttcaagaaca----------tcaactctggccttctcttTAGTGTGGAAAATATATCCAGGTAGTCAGCTAAAAATGAAAGAATGTTGCCCCAGTGTCTTGTCACCATGAAGTGGGCACA---AAGACTCAAAGAAGAGCATTTGCTTTTCTAATAAAGTACCA-GGCAGCTATCCTAGTGGAATTA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81022376 711 - 96509753 AATATCCTTCTGGAGTAAGGATCACATTCCTTTTATGGTTAAGGAGAATGAGGCT-AAAGACGCTATTCGTCAAGTTTATGAAGCTAATGAAATGGAGCGTGGAATGCCTGCTCTTTACCATGGCTACTGTTCTTCTAAGTAATAGAGAGTC-ACAATATGGAAGAAAATAAAGCAAC-----TAGGTATCTCTGGTAAGG-AAAAAGTTATTTC---------------------TTTTGCACTTTAT-GCCTTATGAGAAGGGCATAATACATTTCAAGAAATCAC---TAACTGGCCCAGGCAGATCTGCAATGGACGCTATTTTTCTGACTCAAGAGAAAACAAacctctggcagatgagaatgtactccattctcacagacctccagagactaagattttatataagttctgataattcagtagagagcctaataactcaggctcccgagaagtttcttc---t---gcataacccaagtcctttatgc-tgcccttt--attttctgttgttctcttctctgaagaaatggaaaatatctggttaccactttctgtgt-aaagctctccaaatacttcaagaaca----------tcaactctggccttctcttTAGTGTGGAAAATATATCCAGGTAGTCAGCTAAAAATGACAGAATGTTGCCCCAGTGTCTTGTCACCATGAAGTGGGCACA---AAGACTCAAAAAAGAGCATTTGCTCTTCTAATAAAGTACCA-GGCAGCTATCCTAGTGGAATTA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76279992 712 + 90941950 AATATCCTTCTGGAGTAAGGATCACATTCCTTTTATGGTTAAGGAGAATGAGGCTAAAAGAAGCTATTCGTCAAGTTTATGAAGCTAATGAAATGGAGCGTGGAATGCCTGCTCTTTACCACGGCTACTGTTCTTCTAAGTAATAGAGAGTC-Acaatatggaagaaaataaagcaac-----taGGTATCTCTGGTAAGG-AAAAAGCTATTTC---------------------TTTTGCACTTTAT-GCCTTATGAGAAGGGCATAATACATTTCAAGAAATCAC---TGACTGGCCCAGGCAGATCTGCAATGGATGCTATTTTTCTGACTCAAGAGAAAACAAACCTCTGGCAGATGAGAATGTATTCCATTCTCACAGACCTCCAGAGACTACGATTTTATATAAGTTCTGATAATTCAGTAGAGAGCCTAATAACTCAGGCTCCCGAGAAGTTTCTTC---T---GCATAACCCAAGTCCTTTATGC-TGcccttt--attttctgttgttctcttctctgaagaaatggaaaatatctgGTTACCACTTTCTGTGT-AAAGCTCTTCAAATACTTCAAGAACA----------TCAACTCTGGCCTTCTCTTTAGTGTGGAAAATATATCCAGGTAGTCAGCTAAAAATGACAGAATGTTGCCCCAGTGTCTTGTCACCATGAAGTGGGCACA---AAGACTCAAAGAAGAGCATTTGCTTTTCTAATAAAGTACCA-GGCAGCTTTCCTAgtggaatta i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18549273 715 + 33263144 aatatccttctggagtaaggatcatattccttttatggttaaggagaatgaggctaaaagaagctattcgtcaagtttatgaagctaatgaaatggAGCGTGGAATGCCTGCTCTTTACCACAGCTACTGTTCTTCTAAGTAATAGAGAGTC-ACAAGATGGAAGAAAATAAAGCAAC-----TAGGTATCTCTGGAAAGG-AAAAAGTTATTTC---------------------TTTTGCACTTTAT-GCCTTATGAGAAGGGCATAATACATTTCAAGAAATCAC---TAACTGGCCCAGGCAGATCTGCAATGGACGCTATTTTTCTGACTCAAGAGAAAACAAacctctggcagatgagaatgtactccattctcacagacctccacagactaagattgtatataagttctgataattcagtagagagcctaataactcaggctcccgagaagtttcttc---t---gcataacccaagtcctttatgc-tgcccttt--attttctgttgttctcttctctgaagaaatggaaaatatctggttaccactttctgtgt-aaagctcttcaaatacttcaagaaca----------tcaactctggccttctcttTAGTGTGGAAAATATATCCAGGTAGTCAGCTATAAATGACAGAATGTTGCCCCAGTGTCTTGTCACCATGAAGTGGGCACAACCAAGACTCAAAGAAGAGCTTTTGCTTTTCTAATAAAGTACCA-GGCAGCTATCCTAGTGGAATTA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198252195 716 + 210400635 aatatccttctagagtaaggaccgcatttcttttatggttaaggaaaatgaggctaaaagaagctatctgtcaagtttatgaagctaatgaaatggagcatggaaaacccgctcttTACCAATGTTACTGTTTTTCTAAGTAAT--AGAGTC-ACAATGTGGAAGAAAATAAAGCAAC-----TATGCATCTCTGGT-AGG-AAAAACTTACTGC---------------------TTTTGCACTTTAT-GCCTTATGAGAAGGGCATAATACATTTCAATAAATCAC---TA--------AGGCAGATCTGCAATGGACACTATTTTTCTGACTCAAGAGAAAACACACCTCTgacagatgagaatgtattctattctcacagaccttcggagactaagattctatattagctctgataattcagtagagaacctaataactcatggtccctagaagtttattc---t---gtgtaacccaagtcttttatgc-tgcccttt--attttctgttgttctcttttctgaagaaatggaaaatatgtggttaccattttctgtgtagaagctcttcaagtaattcaagaacagcattaaatctcaactctggccttctcttTCGTGTGGAAAATACATCCAGGTAGTCAGTTATAAATGACTAAATTTTGCCCCATTGTCTTGTCACCACGAAGCAGCCACAACTGAGGCTTAAAGAAGAAGATTTGCTTTTCTAATAAAGTACTAGGGCAGCTATCCTAATGGAATTT i calJac3.chr1 C 0 C 0 s mm10.chr15 77115100 648 + 104043685 AACAACTTTTTGGAGCAAGGTCTGCCCTCTTTTTATAGTTA---CGAACAGAGCT-GAGGTAGGTGTGGTGGAAGTTCATAGAGCTAACTGAATGCAGCACGA-ATTCCTGCTCTTTCCCAGGGTTACTGTT----TAAGGA--TGGGAGTCAACCATGTGGAAGAAAAGAGA-CACC-----TAGATGTCATTTGAAAAG-AAATGAAAATTCC--------------------------CACTTTAT-GCTTTAGGA-AAAGGTATGAGCCAGTCTGTGGAATCAC---TGAA-GGCCTAGGCGGCCTTGGAA-GGCCACTCTCCCTCTGGTTTAGGAGAA-----GCTCCTGCCTG-------------CCATTCTCA---ACACTCA-AGACCAGGTCTCTG----------------TCAGAAGAGCAGCAAGCAACCCATTCGCTCAGGACACGCCTTCACTC---ATGTGACCTCAG-CCTGGTTGC-TGTCCTTT-CAATCTCCACTTCTCTCTTCTCTTTGAAGATGGAAAACAGCCTG-CACCATGCTATGTGGTGAAACTCATTAAGTACCCCAAGATCA------CACCTAAACTCTGACCTTTTCTTTAGTG-GCAAAATACATCCAGGTACTCAGCC----GTGACAGAACTTGGCTCTGA------GCCACCATGAAGTGG-CTTGACCAATAC--AGAGTAGGGCATCTGC---TCTGACAAAGCACCA-GTCAGCTGTCCTCATAAATGTT i mm10.chr15 I 701 C 0 s canFam3.chr10 40875724 755 - 69331447 GCTGTCCTGCTAGGGTAAGGACTGCCTTCCTTTGCTGGTTAAGGAAAATGAGGCTGAAGGAAGCCATCTGTCAACTTTACACAGCTAATAAAATGAAGGATGGAATCTCTCCTCTTTACCACTGCTGCTGTCCTTCCAAGG---TTACACTA-ACCATGCAGAAAAGGACAGAGCAACCCTATCAGGTATCCCTTACAAGG-AAAAttttctttctttctttctttttttttttttttttGCACTTAGCAGCCTTATAGGAAGGGCATAATACATTTCAAGAAATCCCTGATAACTGGCCTAAGCAGATCTTCAATGGACACAATTTTTCTGATTTGAGAGAAAACACACTTCTggcagatgacaatgtactccattttcaccgatctccagagatgaggattccatattatctctgataattcagtagagaaactaataactcatattcctgggaagcttcttc---ttaaacataacctcaattctttaagc-tgccctttatattttctgttgttctcttttctgtagagatg---aacagttggctactgttttctgtgtaaaggctcttcaagtaatccaagaatattattaaatcTCAGCACTGGCCTTGGCTTAGGTATAGAAAATACCCCCAGATGCTCAGCTGTCAGGGACAAAACTTTGCTCCGGGATCTTGTCGCCACGAAGTGGCCACAACCGGGAGTTCAAGCGGGGCACCTGCTTTCCTGACAAAGCACCA-CGCAGCAATGGCAATGAAGTTT i canFam3.chr10 C 0 I 18 a score=-2958.000000 s hg38.chr22_KI270876v1_alt 101346 4 + 263666 aaaa s panTro4.chr22 34479331 4 + 49737984 aaaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30895362 4 + 46535552 AAAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100448006 4 - 115148730 aaaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80596256 4 + 95678458 GAaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81023087 2 - 96509753 GA-- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76280704 4 + 90941950 gaaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18549988 2 + 33263144 GA-- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198252911 4 + 210400635 TTAA i calJac3.chr1 C 0 C 0 s mm10.chr15 77115748 4 + 104043685 TAGG i mm10.chr15 C 0 C 0 e canFam3.chr10 40876479 18 - 69331447 I a score=33437.000000 s hg38.chr22_KI270876v1_alt 101350 42 + 263666 aagaaaacaaacaaacaaaaaaaaaaaacaaaaaaaCTATTG s panTro4.chr22 34479335 41 + 49737984 aagaaaacaaacaaac-aaacaaaaaaacaaaaaaacTATTG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30895366 38 + 46535552 AAGAAAACAAACAAAC----AAAAAAAACAAAAAGACTATTG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100448010 42 - 115148730 aagaaaacaagcaaacaaacaaaaaacccaaaaaaacTATTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80596260 29 + 95678458 aacaaaaca-----------aaacaaaacaaaa--cCTATTG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81023089 26 - 96509753 ---AAAACA-----------AAACAAAACAAAA--CCTATTG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76280708 29 + 90941950 aacaaaaca-----------aaacaaaacaaaa--cctattg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18549990 26 + 33263144 ---AAAACA-----------AAACAAAACAAAA--CCTATTG i chlSab2.chr19 C 0 C 0 s mm10.chr15 77115752 9 + 104043685 ---------------------------------GAACTATTG i mm10.chr15 C 0 C 0 e canFam3.chr10 40876479 18 - 69331447 I e calJac3.chr1 198252915 0 + 210400635 C a score=951121.000000 s hg38.chr22_KI270876v1_alt 101392 337 + 263666 ATTATCTCT------GG-----GTTAAGAGTTTGGTCAAATTCAAAAAGCAATAACAAGCAGGCTCAGAAAAAAT-TAAGATCCTTAGCAGCCATTCACTAACTTCCCAACAACTCAAATCTTTGCAATTTAAC--TTTTTTTCATGATGGTGA-TTCAGGAGGAAATAAACAGTTGAAAGAATACATCAGAGGTAGCAAACCAATCCTCTACA-ATG-ATTTTAGATATTGGTCTT--GACACTGTGCAG-TATGAGCAACAACGTATTATAAAAACAAAACACTGagg---tactgt---tttcacaaatgttatttcatttaatttataacactctgaaaggtagacattactgtctcta s panTro4.chr22 34479376 337 + 49737984 ATTATCTCT------GG-----GTTAAGAGTTTGGTCAAATTCAAAAAGCAATAACAAGCAGGCTCAGAAAAAAT-TAAGATCCTTAGCAGCCATTCACTAACTTCCCAACAACTCAAATCTTTGCAATTTAAC--TTTTTTTCATGATGGTGA-TTCAGGAGGAAATAAACAGTTGAAAGAATACATCAGAGGTAGCAAACCAATCCTCTACA-ATG-ATTTTAGATATTGGTCTT--GACACTGTGCAG-TATGAGCAATAAAGTATTATAAAAACAAAACATTGagg---tactgt---tttcacaaatgttatttcatttaatttataacactctgaaaggtagacattactgtctcta i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30895404 336 + 46535552 ACTATCTCT------GG-----GTTAAGAGTTTGGTCAAATTCAAAAAGCAATAACACGCAGGCTCAGAAAAAAT-TAAGATCCTTAGTAGCCATTCATTAAATTCCCAACAACTCAAATCTTTGCAA-TTAAC--TTTTTTTCATGATGGTGA-TTCAGGAGGAAATAAACAGTTGAAAGAATACATCAGAGGTAGCAAACCAATCCTCTACA-ATG-ATTTTAGATATTGGTCTT--GACACTGTGGAG-TATGAGCAACGAAGTATTATAAAAACAAAACACTGagg---tactgt---tttcacaagtattatttcatttaatttataacactctgaaaggtagagattactgtctcta i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100448052 336 - 115148730 ATTATCTCT------GG-----GTTAAGAGTGTGGTCAAATTCAAAAAGCAATAACACGCAGGCTCAGAAAAAAT-TAAGATCCTTAGCAGCCATTCACTAACTTCTCAACAACTTAAATCTTTGCAA-TTAAC--TTTTTTTCATGATGGTGA-TTCAGGAGGAAATAAACAGTTGAAAGAATACATCAGAGGTAGCAAACCAATCCTCTACA-ATG-ATTTTAGATATTGGTCTT--GACACTGTGGAA-TATGAGCAACGAAGTATTATAAAAACAAAACATTGagg---tactgt---tttcacaaatattatttcatttaatttataacactctgaaaggtaaagattactgtctcta i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80596289 331 + 95678458 ATTATCTCT------GG-----GTTAAGAGTTTGGTCAAATTCAAAAAGCAAAAACACACAGGCTCAGAAAAAAT-TAAGATCCTTAGCAGCCATTCAC----TTCCCAACAACTTAAATCTTTGCAA-TTAAC---TTTTTTCATGATGGTGA-TTCAGGAGGAAATAAACAGTTGAAAGAATACATCAGAGGTAGTAAACCAATCCTCTACA-ATG-ATTTTAGATACTGGTTTT--GACACTGTGGGG-TACGAGCAACGAAGTATTATAAAAACAAAATACTGagg---tactgt---tttcacaaatattatttcatttaatttataacactctgaaaggcagagattactatctcta i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81023115 331 - 96509753 ATTATCTCT------GG-----GTTAAGAGTTTGGTCAAATTCAAAAAGCAGAAACACACAGGCTCAGAAAAAAT-TAAGATCCTTAGCAGCCATTCAC----TTCCCAACAACTTAAATCTTTGCAA-TTAAC---TTTTTTCATGATGGTGA-TTCAGGAGGAAATAAACAGTTGAAAGAATACATCAGAGGTAGTAAACCAATCCTCTACA-ATG-ATTTTAGATACTGGTTTT--GACACTGTGGGG-TACGAGCAACAAAGTATTATAAAAACAAAATACTGAGG---TACTGT---Tttcacaaatattatttcatttaatttataacactctgaaaggcagagattactatctcta i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76280737 331 + 90941950 ATTATCTCT------GG-----GTTAAGAGTTTGGTcaaattcaaaaagcaaaaacacacagGCTCAGAAAAAAT-TAAGATCCTTAGCAGCCATTCAC----TTCCCAACAACTTAAATCTTTGCAA-TTAAC---TTTTTTCATGATGGTGA-TTCAGGAGGAAATAAACAGTTGAAAGAATACATCAGAGGTAGTAAACCAATCCTCTACA-ATG-ATTTTAGATATTGGTTTT--GACACTGTGGGG-TATGAGCAACGAAgtattataaaagcaaaatactgAGG---TACTGT---TTtcacaaatattatttcatttaatttataacACTCTGAAAGGCAGAGATTACTATCTCTA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18550016 331 + 33263144 ATTATCTCT------GG-----GTTAAGAGTTTGGTCAAATTCAAAAAGCAAAAACACACAGGCTCAGAAAAAAT-TAAGATCCTTAGCAGCCATTCAC----TTCCCAACAACTTAAATCTTTGCAA-TTAAC---TTTTTTCATGATGGTGA-TTCAAGAGGAAATAAACAGTTGAAAGAATACATCAGAGGTAGTAAACCAATCCTCTACA-ATG-ATTTTAGATATTGGTTTT--GACACTGTGGAG-TATGAGCAATGAAGTATTATAAAAACAaaacactgagg---tactgt---tttcacaaatattatttcatttaatttataacactctgaaaggtagagattactatcttta i chlSab2.chr19 C 0 C 0 s mm10.chr15 77115761 317 + 104043685 ACTATTTCTTGTCCCAG-----GTCAAGTTATTCGCTAAAAT-AAAAGACAGCAACAAACAGACTTAGAAAAAA----------TTAGCAGCTACTCAC-----CTTCAACAGCATGAATTCGTGCTA-TTAGA-GTTTTGTGTTTGCTGGTGA-TTTGGGAGGGTGCTAACAGCTGAAGGAGC---TGATGGGTAGGGAACCAGTGTTCCACA-GCATATCTTACATGCTGGCCTT--GACACTACTGAG-GGGAAGGAATG---------GAAAACAAAGCCCTGAGAATCACCTGC---CTCTACAGGTGCTACTTCATTTTCTTCTAAACACTC---AAGTTAGAGatttttaaatata i mm10.chr15 C 0 C 0 s canFam3.chr10 40876497 333 - 69331447 CTTATTCCT------AGTTCAAGTTAAGAGTTCCCTCAAAT--GAAATCTGACAATACATAAGCTCAGAAAATACGTAAGATTTCCAGTAGTCATTCAC----ATTCCAATAACTTAAATCTTTGCTG-TTATGCTTTGTTTTCATGATGATGATTTTGGGAGGAAACTGA-AGCTGGAAACATACATCAGAGGTAGAAAACTGACCACCTACACCTG-ATCTTAGATATTGGTCTTGAGACGCTGTTGAGTTATGAGCAGGGAAGT-----AAAAACAAAA-------G---TACCATCTGCTTCACAAACATTAGGTCATTGAACTTGTAACACTCCAAAGGGGAAGGATTATTGTCTTTG i canFam3.chr10 I 18 C 0 e calJac3.chr1 198252915 0 + 210400635 C a score=1500475.000000 s hg38.chr22_KI270876v1_alt 101729 587 + 263666 tgttta--taaatatgatatttaaattc--------aaaaaggttacatgaatt-ccaaagttcacatgcgaatagaatttgaacccaggctctttgactccaaaatctatactctttccacttcaataagccacctctAAACCTGTATTCTCT-ACATTGTGAATCTTTTTAGACATTACAAAGCTAAGTAGAGAGTGGCAATAACGCATCCCTGAACCTAGTTTCTTTGGTCTTGGAGTTGAGGGAGATAA-GAGGAGAGGAAGGCAGTATTGAGCTGGACTTATATGGAAGGTAAA-GAAAAAACAAAGAAGGCGACAGGATGAATAAGcaatggttcccaaacttatgtgcacattagtatcagct-ggggattttgtaaacataccaaagcccaagccacactccaggccaattaaatcaca--------------------------------------------accctagaatgtcaggcataggcat-----------------caatattttttaagcttcccaggtaatttccagtgtgcaaacaagtttaggaatcattgCTCTAAAAGAATGTGCATGTTTGTTCTTGCAGATGAAACTAAGCATATTATTGGTATGTTTACTGAGTTTGGTAGGTGAGTAGGGTgacca s panTro4.chr22 34479713 588 + 49737984 tgttta--taaatatgatatttaaattc--------aaaaagattacatgaatt-ccaaagttcacatgcgaatagaatttgaacccaggctctttgactccaaaatctatactctttccacttcaataagccacctctAAACCTGTATTCTCT-ACATTGTGAATCCTTTTAGACATTACAAAGCTAAGTAGAGAGTGGCAATAACGCATCCCTGAACCTAGTTTCTTTGGTCTTGGAGTTGAGGGAGATAA-GAGGAGAGGAAGGCAGTATTGAGCTGGGCTTATATGGAAGGTAAA-GAAAAAACAAAGAAGGCGACAGGATGAATAAGcaatggttcccaaacttatgtgcacattagtatcacctgggggatcttgtaaacataccaaagcccaagccacactccaggccaattaaatcaca--------------------------------------------accctagaatgtcagacataggcat-----------------caatattttttaagcttcccaggtaatttccagtgtgcaaacaagtttaggaatcattgCTCTAAAAGAATGTGCATGTTTGTTCTTTCAGATGAAACTAAGCATATTATTGGTATGTTTACTGAGTTTGGTAGGTGAGTAGGGTgacca i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30895740 588 + 46535552 tgttta--taaatatgatatttaaattc-------aaaaaaggttacatgaatt-ccaaagttcacatgcgaatagaatttgaacccaggctctctgactccaaaatctatactctttccacttcaatgagccacctctAAACCTGTATTCTCT-ACATTGTGAATCTTTTTAGACACTACAAAGCTAAGTAGAGAGTGGCAATAATGCATCCCTGAACCTAGTTTCTTTGGTCTTGCAGTTGAGGGAGATGA-GAGGAGAGGAAGGCAGTATTGAACTGGGCTTACATGGAAGGCAAA-GAAAAAACAAAGAAGGCGACAGGATGAATAAGcaatggtccccaaacttatgtgcacattagtatcagct-ggggatcttgtaaacataccaaagcccaagccacactccaggccaattaaatcaca--------------------------------------------accctagaatgtgagacacaggcat-----------------caatattttttaagcttcccaggtaatttccagtgtgcaaacaagtttaggaatcattgCTCTAAAAGAATGTGCATGTTTGTTCTTTCAGATGAAACTAAGCATATTATTGGTATGTTTACTGAGTTTGGTAGGTGAGTAGGGTgacca i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100448388 587 - 115148730 tgttta--taaatatgatatttaaattc--------aaaaaggttacatgaatt-ccaaagttcacatgtgaatagaatttgaacccaggctctttgactccaaaatctatactctctccacttcaatgagccacctctAAACCTGTATTCTCT-ACATTGTGAATCTTTTTAGACATTACAAAGCTAAGTAGAGAGTGGCAATAACGCATCCCTGAACCTAGTTTCTTTGGTCTTGCAGTTGAGAGAGGTAA-GAGGAGAGGAAGGCAGTATTGAGCTGGGCTTATATGGAAGGCAAA-GAAAAAACAAAGAAGGCGACAGGATGAATAAGcaatggtccccaaacttatgtgcacattagtatcggct-ggggatcttgtaaacataccaaagcccaagccacactccaggccaattaaatcaca--------------------------------------------accctagaatgtgagacataggcat-----------------caatattttgtaagcttcccaggtaatttccagtgtgcaaacaagtttaggaatcattgCTCTAAAAGAATGTGCATGTTTGTTCTTTCAGATGAAACTAAGCATATTATTGGTATGTTTACTGAGTTTGGTAGGTGAGTAGGGTgacca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80596620 588 + 95678458 tgttta--caaatatgatatttaaattc--------aaaaaggttacatgaatc-ccaaagttcacacgcgaatagaatctgaacccagactctttgactccaaaatctatactctttccactttaatgagccacctctAAACCTGTATTCTCT-ACATCGTGAATCTTTTTAGACATTACAAAGCTAAGTAGAGAGTGGCAATAATGCATCCCTGAATCTAGTTTCTTTGGTCTTGCAGTTGAGGCAGATAA-GAGGAGAGGAAGGCAGTACTGAGCTGGGCTTACATGGAAGGCAAAGGAAAAAACTAAGAAGGCGACAGGATGAATAAGcagtggtccccaaacttaagtgcacatgagtatcagct-ggggatcttgtaaacatacctaagcccaagccacactccaggccaattaaatcaca--------------------------------------------accctagaatgtgagacatagacat-----------------caatattttttaagcttcccaggtaatttccagtgtgcaaacaagtttaggaatcattgCTCTAAAAGAATATGCACGTTTGCTCTTTCAGGTGAAACTAAGCATAATATTGGTATGTTTACTGAGTTCGGTAGGTGAGTAGGGTGACCA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81023446 588 - 96509753 tgttta--caaatatgatatttaaattc--------aaaaaggttacatgaatc-ccaaagttcacatgcgaatagaatctgaacccagactctttgactccaaaatctatactctttccactttaatgagccacctctAAACCTGTATTCTCT-ACATCGTGAATCTTTTTAGACATTACAAAGCTAAGTAGAGAGTGGCAATAATGCATCCCTGAATCTAGTTTCTTTGGTCTTGCAGTTGAGGCAGATAA-GAGGAGAGGAAGGCAGTACTGAGCTGGGCTTACATGGAAGGCAAAGGAAAAAACTAAGAAGGCGACAGGATGAATAAGcagtggtccccaaagttaagtgcacatgagtatcagct-ggggatcttgtaaacatacctaagcccaagccacactccaggccaattaaatcaca--------------------------------------------accctagaatgtgagacatagacat-----------------caatattttttaagcttcccaggtaatttccagtgtgcaaacaagtttaggaatcactgCTCTAAAAGAATATGCACGTTTGCTCTTTCAGGTGAAACTAAGTATATTATTGGTATGTTTACTGAGTTCGGTAGGTGAGTAGGGTGACCA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76281068 589 + 90941950 TGTTTA--CAAATATGATATTTAAATTC--------AAAAAGGTTACATGAATC-CCAAAGTTCACACGCGAATAGAATCTGAACCCAGACTCTTTGACTCCAAAATCTATACTCTTTCCACTTTAATGAGCCACCTCTAAACCTGTATTCTCTAACATCGTGAATCTTTTTAGACATTACAAAGCTAAGTAGAGAGTGGCAATAATGCATCCCTGAATCTAGTTTCTTTGGTCTTGCAGTTGAGGCAGATAA-GAGGAGAGGAAGGCAGTACTGAGCTGGGCTTAcatggaaggcaaaggaaaaaactAAGAAGGCGACAGGATGAATAAGCAGTGGTCCCCAAATTTAAGTGCACATGAGTATCAGCT-GGGGATCTTGTAAACATACCTAAGCCCAAGCCACACTCCAGGCCAATTAAATCACA--------------------------------------------ACCCTAGAATGTGAGACATAGACAT-----------------CAATATTTTTTAAGCTTCCCAGGTAATTTCCAGTGTGCAAACAAGTTTAGGAATCATTGCTCTAAAAGAATATGCACGTTTGCTCTTTCAGGGGAAACTAAGCATATTATTGGTATGTTTACTGAGTTCAGTAGGTGAGCAGGGTGACCA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18550347 588 + 33263144 tgttta--caaatatgatatttaaattc--------aaaaaggttacatgaatc-ccaaagttcacacgcgaatagaatctgaacccagactctttgactccaaaatctatactctttctactttaatgagctacctctAGACCTGTATTCTCC-ATATCGTGAATCATTTTAGACATTACAAAGCTAAGTAGAGAGTGGCAATAATGCATCCCTGAACCTAGTTTCTTTGGTCTTGCAGTTGAGGCAGATAA-GAGGAGAGGAAGGCAGTACTGAGCTGGGCTTACATGGAAGGCAAAGGAAAAAACTAAGAAGGGGACAGGATGAATAAGcaatggtccccaaacttaagtgcacatgagtatcagct-ggggatcttgtaaacatacctaagcccaagccacactccaggccaattaaatcaca--------------------------------------------accctagaatgtgagacatagatat-----------------caatattttttaagcttcccaggtaatttccagtgtgcaaacaagtttaggaatcattgCTCTAAAAGAATATGCACGTTTGCTCTTTCAGGTGAAACTAAGCATATTATTGGTATGTTTACTGAGTTCGGTAGGTGAGTAGGGTgacca i chlSab2.chr19 C 0 C 0 s mm10.chr15 77116078 588 + 104043685 aatttaatCTCATATAAACTTCAAATCAAGGTTTAAAAAGAGATGACATGAATCTCCTAAGGTCCTAAGCAGCCAGGATTTGATCCCGGGCTCTTTAAAATCCCATTCCATATCTGCTTCATTTAAACGAGCCTCCTGCAGACCTGAATTACCC-ACGCTTCACGTGCTGGGAGACAGTACAGAG----GTAGAGAGTGGCACTAGT-CAT-CCTGAACC-----------------------AGAGACATAAGGAGGACAGTGAGG--------------------GTGGGAGGTGCT---------------GACGTCAGGA-GAATGAGCA--TGTCACTCTACTGAGAGCCACAC-AGAATCATGT-GAGGATGGCGTACA-GTGAGCAGGTTCACACTGCACTCTGGGCCAGccacagcacacctggccacagcacacctggccacagcacacctggccacagcacacctggccacagcacacctggccacagcacaccTGGGCTGTGCAGTATTCTTTAGGCGCCACAGAGGATTTCCAAGGTACCCACAGGTTTAGGAATCAC-ACTATAAAAGAC--TGGATGTTTGCTCTTCTAG-TGAAACCAAGACTATTACCGACATGTTTATTAAGGTTGGTGTGTGAAGAAGGTGGCCA i mm10.chr15 C 0 C 0 e canFam3.chr10 40876830 0 - 69331447 C e calJac3.chr1 198252915 0 + 210400635 C a score=396081.000000 s hg38.chr22_KI270876v1_alt 102316 148 + 263666 tcctggtttcagcactgaaagtctcacatcacaagaaacccctcagtcacagcaagctgggtcatatcgccaccttaTGTGTGCA----GCCACCTGCAAGAC-TATGTCTAGAGCAG-------ACTGGATGACAGAAAAAGGCTTCTAAAGACTGATG s panTro4.chr22 34480301 148 + 49737984 tcctggtttcagcactgaaagtctcacatcacaagaaacccctcagtcacagcaagctgggtcatatcgccaccttaTGTGTGCA----GCCACATGCAAGAC-TATGTCTAGAGCAG-------ACTGGATGACAGAAAAAGGCTTCTAAAGACTGATG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30896328 148 + 46535552 tcctggtttcagcactgaaagtctcacatcacaagaaacccctcagtcacagcaagctgggtcatatggccatcttaTGTGTGCA----GCAACCTGCAAGAC-TATGTCTAGAGCAG-------ACTGGATGACAGAAAAAGGTTTCTAAAGACCGATG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100448975 148 - 115148730 tcctggtttcagcactgaaagtctcacatcacaagaaacccctcagtcacagcaagctgggtcatatggccaccttaTGTGTGCA----GCAACCTGCAAGAC-TATGTCTACAGCAG-------ACTGGATGACAGAAAAAGGTTTCTAAAGACTGATG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80597208 148 + 95678458 TGctggtttcagcactgaaagtctcccatcacaagaagcccctcagtcacagcaaactgggtcatagggccaccttaTGCGTGCA----GCAACCTGCAAGAC-TATGTCTAGAGCAG-------ACTGGATGATAGAAAAAGGTTTCTAAAGACTGATG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81024034 148 - 96509753 TGctggtttcagcactgaaagtctcccatcacaagaagcccctcagtcacagcaaactgggtcatagggccaccttaTGCGTGCA----GCAACCTGCAAGAC-TATGTCTAGAGCAG-------ACTGGATGATAGAAAAAGGTTTCTAAAGACTGATG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76281657 148 + 90941950 TGCTGGTTTCAGCACTGAAAGTCTCCCATCACAAGAAGCCCCTCAGTCACAGCAAACTGGGTCATAGGGCCACCTTATGCGTGCA----GCAACCTGCAAGAC-TATGTCTAGAGCAG-------ACTGGATGATAGAAAAAGGTTTCTAAGGACTGATG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18550935 148 + 33263144 tcctggtttcagcactgaaagtctcccatcacaagaagcccctcagtcacagcaaactgggtcatagggccaccttaTGCGTGCA----GCAACCTGCAAGAC-TATGTCTAGAGCAG-------ACTGGATGATAGAAAAAGGTTTCTAAAGACTGATG i chlSab2.chr19 C 0 C 0 s mm10.chr15 77116666 138 + 104043685 CCT---------CAGTGGATGTCACATCTTACAAGAACCACCTCAGTCCTAGACAAC--AACCGCAAG--CAGCTTGTGTGTCCATGTGACAATCAGAAATGCAAATGTCTGCGGCAG-------GTAAGGGGACCAGGAAAGGTTTCCA--GACAAACA i mm10.chr15 C 0 C 0 s canFam3.chr10 40876830 145 - 69331447 tcctgattttag-actgaaaggctcatgtctcaagtggccccaggttccaggcaaatcaggttgcatggtcaccTGGT-TATGTG----AGAACCTGCAATGA-TAGAATGATAGGAGTGATGGCGCTAGGTGACAGAA--------CTGAAGACCGATG i canFam3.chr10 C 0 C 0 e calJac3.chr1 198252915 0 + 210400635 C a score=340300.000000 s hg38.chr22_KI270876v1_alt 102464 97 + 263666 AAAAGACTGATTTACCTCAGGTTCTT--TCAATCTATTT---GTAGTTTAATCCTAAAGTAATAATGACTAAT---AACACATCTGGGGGATTAAAATCTACTTT s panTro4.chr22 34480449 97 + 49737984 AAAAGACTGATTTACCTCAGGTTCTT--TCAATCTATTT---GTAGTTTAATCCTAAAGTAATAATGACTAAT---AACACATCTGGGGGATTAAAATCTACTTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30896476 97 + 46535552 AAAAGACTGATTTACCTCAGGTTCTT--TCAATCTATTT---GTAGTTTAATCCTAAAGTAATGATGACTAAT---AACACATCTGGGGGATTAAAATCTACTTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100449123 97 - 115148730 ACAAGACTGATTTACCTCAGGTTCTT--TCAATCTATTT---GTAGTTTAATCCTAAAGTAATAATGACTAAT---AACACATCTGGGGGATTAAAATCTACTTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80597356 99 + 95678458 AAAAGACCGATTTATCTCAGAATCTTTCTCAATCTATTT---GTAGTTTAAGCCTAAAGTAATAATGACTAAT---AACACACCTGGGGGATTAAAATCTACTTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81024182 99 - 96509753 AAAAGACCGATTTATCTCAGAATCTTTCTCAATCTATTT---GTAGTTTAAGCCTAAAGTAATAATGACTAAT---AACACACCTGGGGGATTAAAATCTACTTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76281805 99 + 90941950 AAAAGACCGATTTATCTCAGGATCTTTCTCAATCTATTT---GTAGTTTAAGCCTAAAGTAATAATGACTAAT---AACACACCTGGGGGATTAAAATCTACTTT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18551083 99 + 33263144 AAAAGACTGATTTATCTCAGGATCTTTCTCAATCTATTT---GTAGTTTAAGCCCAAAGTAATAATGACTAAT---AACGCACCTGGGGGATTAAAATCTACTTT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198252915 99 + 210400635 AAAAAACTGATTTCCCTCAGGATCTTTCTCAATCTATTT---GTAGTTTAATCCTGAAGTAATAATAACTAAT---AACACATCTGGGGGATTAAAATCTCCTTT i calJac3.chr1 C 0 C 0 s mm10.chr15 77116804 83 + 104043685 ACAACAGTGACTCA----AGGCTCTCTCTTAACTTCCCT---ACGGTTT----------TACTAATGACTAGT---AATACCTCTGATGGGTTAAA--TTGTTTT i mm10.chr15 C 0 C 0 s canFam3.chr10 40876975 105 - 69331447 AAAACACTGATTTACCTTAGGATGTCTCTCAACCTGTGTGCAGCAGTCTTATCCTAATGTCCTAATGATTTATTTAAATACAGCAGGTGGATTAAATTATATTTT i canFam3.chr10 C 0 I 162 a score=1864946.000000 s hg38.chr22_KI270876v1_alt 102561 498 + 263666 AATTG--------------------------------TAAAATCCATAAAAAGACTTCAGAGACTTACCCCAAACATCTGCCGGAGGTCAGGGTCCCGGAAGCGGAAAGGAATATTAGAGACATGCAGCCGTTTCGGGGTAGATTTACTCTCTGAATTTTCACTACTTTGTGTCTGTGACTGCTGGCCGTCTGTCTGTGCTCCACCTTCTGTCTGCTAAGCAAAGA---------AATAAAGAATGAAAAATATACACAATTACTT-------------TAAAATAA--TTAAAGTTATCC--CCCCACAGCAATCATCCCCAAACAGGGTATGTTTAAGCAAAAATC-ACAGTAGTCCCTTCAAAG------acaaaagcaacaacaacagcagcaacaacaaaacacaaAGATGCTATTAATGTTCTAAATGCTACC-GTCTACAAACAAAATGTTGGTGTTTTGAGTA-TTTATAGTATGCTAACAAAATgggagctaacgaacacggaagtactaagtgacttgcccaagatcacatggAGATACATTAGG-AT-------CTGAAGAT s panTro4.chr22 34480546 498 + 49737984 AATTG--------------------------------TAAAATCCATAAAAAGACTTCAGAGACTTACCCCAAACATCTGCCGGAGGTCAGGGTCCCGGAAGCGGAAAGGAATATTAGAGACATGCAGCCGTTTCGGGGTAGATTTACTCTCTGAATTTTCACTACTTTGTGTCTGTGACTGCTGGCCGTCTGTCTGTGCTCCACCTTCTGTCTGCTAAGCAAAGA---------AATAAAGAATGAAAAATATACACAATTACTT-------------TAAAATAA--TTAAAGTTATCC--CCCCACAGCAATCATCCCCAAACAGGGTATGTTTAAGCAAAAATC-ACAGTAGTCCCTTCAAAG------acaaaagcaacaacaacaacagcaacaacaaAACACAAAGATGCTATTAATGTTCTAAATGCTACC-GTCTACAAACAAAATGTTGGTGTTTTGAGTA-TTTATAGTATGCTAACAAAATgggagctaacgaacacggaagtactaagtgacttgcccaagatcacatggAGATACATTAGG-AT-------CTGAAGAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30896573 501 + 46535552 AATTG--------------------------------TAAAATCCATAAAAAGACTTCAGAGACTTACCCCAAACATCTGCCGGAGGTCAGGGTCCCGGAAGCGGAAAGGAATATTAGAGACATGCAGCCGTTTTGGGGTAGATTTACTCTCTGAATTTTCACTACTTTGTGTCTGTGACTGCTGGCCGTCTGTCTGTGCTCCACCTTCTGTCTGCTAAGCAAAGA----AAT--AATAAAGAATGAAAAATACACACAATTACTT-------------TAAAATAA--TTAAAGTTATCC--CCCCACAGCAATCATCCCCAAACAGGGTATGTTTAAGCAAAAATT-ACAGTAGTCCCTTCAAAG------acaaaagcaacaataacaacagcaacaacaaAACACAAAGATGCTATTAATGTTCTAAATGCTACC-GTCTACAAACAAAATCTTGGTATTTTGAGTA-TTTATAGTACGCTAACAAAATgggagctaatgaacacagaagtactaagtgacttgcccaagatcacatggagataCATTAGG-TT-------CTGAAGAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100449220 496 - 115148730 AACTG--------------------------------TAAAATCCATAAAAAGACTTCAGAGACTTACCCCAAACATCTGCCGGAGGTCAGGGTCCCGGAAGCGGAAAGGAATATTAGAGACATGCAGCCGTTTCGGGGTAGATTTACTCTCTGAATTTTCACTACTTTGTGTCTGTGACTGCTGGCCGTCTGTCTGTGCTCCACCTTCTGTCTGCTAAGCaaagaaataaat--aataaagaatgaaaaatacacacaattactt-------------taaaataa--ttaaaGTTATCC--CCCCACAGCAATCATCCCCAAACAGGGTATGTTTAAGCAAAAATT-ACAGTAGTCCCTTcaaag------acaaaaacaacaa---------caacaacaaaacacaaaGATGCTATTAATGTTCTAAATGCTACC-GTCTACAAACAAAATGTTGGTGTTTTGAGTA-TTTATAGTACGCTAACAAAATGGGAGCTAGTGAACGCagaagtactaagtgacttgcccgagatcacatggAGATACATCAGG-AT-------CTGAAGAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80597455 495 + 95678458 AATTG--------------------------------TAAAATCCATAAAAAAACTTCAGAGACTTACCCCAAACATCTGCCGGAGGTCAGGGTCCCGGAAGCGGAAAGGAATATTAGAGACATGCAGCCGTTTCGGGGTAGATTTACTCTCTGAATTTTCACTACTTTGTGTCTGTGACTGCTGGCCGTCTGTCTGTGCTCCACCTTCTGTCTGCTAAGCAAAGAAATAAAT--AATAAAGAATGAAAACTAAACACAATTACTC-------------TAAAATAA--TTAATGT--TCC--CCCCACAGCAATCATCCCCAAACAGGGTATGTTTAAGCAAAAATT-ACAGTAGTCCCTTCAAAG------ACAAAAACAACAA---------CAACAA-AAAACACAAAGATGTTATTAATGTTCTAAATGCTACC-ATCTACAAACAAAATGTTGGTGTTTTGAGTA-TTTACAGTATGCTAGCAAAATgggagctgaggtacacagaagtactaagtgacgtgcccaagatcacaTGAAGATGCATTAGG-ATAA-----CTGAAGAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81024281 495 - 96509753 AATTG--------------------------------TAAAATCCATAAAAAAACTTCAGAGACTTACCCCAAACATCTGCCGGAGGTCAGGGTCCCGGAAGCGGAAAGGAATATTAGAGACATGCAGCCGTTTCGGGGTAGATTTACTCTCTGAATTTTCACTACTTTGTGTCTGTGACTGCTGGCCGTCTGTCTGTGCTCCACCTTCTGTCTGCTAAGCaaagaaataaat--aataaagaatgaaaactaaacacaattactc-------------taaaataa--ttaatGT--TCC--CCCCACAGCAATCATCCCCAAACAGGGTATGTTTAAGCAAAAATT-ACAGTAGTCCCTTcaaag------acaaaaacaacaa---------caacaa-aaaacacaaaGATGTTATTAATGTTCTAAATGCTACC-ATCTACAAACAAAATGTTGGTGTTTTGAGTA-TTTACAGTATGCTAGCAAAATgggagctgaggtacacagaagtactaagtgacttgcccaagatcacaTGAAGATGCATTAGG-ACAA-----CTGAAGAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76281904 495 + 90941950 AATTG--------------------------------TAAAATCCATaaaaaaaCTTCAGAGACTTACCCCAAACATCTGCCGGAGGTCAGGGTCCCGGAAACGGAAAGGAATATTAGAGACATGCAGCCGTTTCGGGGTAGATTTACTCTCTGAATTTTCACTACTTTGTGTCTGTGACTGCTGGCCGTCTGTCTGTGCTCCACCTTCTGTCTGctaagcaaagaaataaat--aataaagaatgaaaactaAACACAATTACTC-------------TAAAATAA--TTAATGC--TCC--CCCCACAGCAATCATCCCCAAACAGGGTATGTTTAAGCAAAAATT-ACAGTAGTCCcttcaaag------acaaaaacaacaa---------caacaa-aaaacacaaagatgttATTAATGTTCTAAATGCTACC-ATCTACAAACAAAATGTTGGTGTTTTGAGTA-TTTACAGTATGCTAGCAAAATGGGAGCTGAGGTACACAGAAGTACTAAGTGACTTGACCAAGATCACATGAAGATGCATTAGG-Ataa-----ctgaagat i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18551182 501 + 33263144 AATTG--------------------------------TAAAATCCATAAAAAAACTTCAGAGACTTACCCCAAACATCTGCCGGAGGTCAGGGTCCCGGAAGCGGAAAGGAATATTAGAGACATGCAGCCGTTTCGGGGTAGATTTACTCTCTGAATTTTCACTACTTTGTGTCTGTGACTGCTGGCCGTCTGTCTGTGCTCCACCTTCTGTCTGCTAAGCAAAGAAATACAT--AATAAAGAATGAAAACTAAACACAATAACTT-------------TAAAATAA--TTAATGT--TCC--CCCCACAGCAATCATCCCCAAATAGGGTATGTTGAAGCAAAAATT-ACAGTAGTCCCTTCAAAGacaacaacaacaacaacaa---------caacaa-AAAACACAAAGATGTTATTAATGTTCTAAATGCTACC-ATCTACAAACAAAATGTTGGTGTTTTGAGTA-TTTATAGTATGCTAGCAAAATgggagctgaggtacacagaagtactaagtgacttgcccaagatcacaTGAAGATGCATTAGG-ATAA-----CTGAAGAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198253014 494 + 210400635 AATTG--------------------------------TAAAATCCATAAAAAGACTTCAGAGACTTACCCCAAACATCTGCCGGAGGTCAGGGTCCCGGAAGCGGAAAGGAATATTAGAGACATGCAGCCGTTTCGGGGTAGATTTACTCTCTGAATTTTCACTACTTTGTGTCTGTGACTGCTGGCCATCCGTCTGTGCTCCACCTTCTGTCTGCTAAGCAAAGAAATAAAT--AGTAATGTATGAAAAATAAACACAATTACTT-------------TAAAATAA--TTAAAGTTATTC--CCCCACAGTAACCATCTCCAAACAGTGTATGTTTAAGCAAAAATT-ACAGTTGTCCCTTCAAAG---------AAAACACCAC---------CACCAC-----CACAAAGATGTTACTAATGTTCTTAATGCTATT-GTCTACAAACAAACTGTTGGTGTTTTGAGTA-TTTATAGTATGCTAGTAAAATGGGAGATAAT-AACACAGAAGTACTAAGTGACTTGCCCACGATCACATGGAGATACATTAGG-ATAATACATCTAGATAT i calJac3.chr1 C 0 I 318 s mm10.chr15 77116887 458 + 104043685 AATT-----------------------------------AAATCCATAAAAAAAAAAATGAGACTTACCCCAAACATCTGCCGGAGGTCAGGGTCTCGGAAGCGGAAGGGAATATTAGAGACATGTAGTCGCTTGGGCGTAGATTTACTCTCTGAATTTTCACTACTTTGTGTCTGTGACTGTTGTCCGTCTGTCTGTGCTCCACCTTCTGTCTGCTAAAGAAATAAGTAAATACAAGGAACAATGAAAACC---TACAGTGATCTCC-----------TAAGATGATCTTAGTGTATTTCTGCTTCACTGTAGTAACTGTCAAACAGAAGAC-TGCAAGCAAACACTGGTAACTGTCCTTTTAAAG------GAGAAAAGGCCCG-------------------------AGGTGTCATTGATGTTCAAAATGCTTCTAGTCTACAAACAAAATTTGGGTTTTCTGTTTA-TTTTTAGTATATTAGCAAAATGGG-----GCGCAGGCAGTGGCCCTC--TCGTTTGCTGAAGCCCACATGGAGAT-------------------------- i mm10.chr15 C 0 C 0 s canFam3.chr10 40877242 524 - 69331447 aattgaaaaaaaatttttTTAGATTATATTTTCACTCTAAAACCCACAAAAGGACTCCAGAGACTTACCCCAAACATCTGTCGGAGGTCAGGGTCCCGGAAGCGGAAGGGAATATTAGAGACATGCAGCCGTTTAGGGGTGGATTTGCTCTCTGAGTTCTCACTACTTTGTGTCTGTGACTGCTGGCCATCTGTCTGTGCTCCCCCTTCCGTCTGCAGGGCAAAGAGACAGAC--AACATTGAGCGAAAAATAAACACAATTACTTCATAAGAATTATGTAAAATAA--TTAATGC--CCA--CCCAACCCCAATCATTCTCAAACAGCGTGTATTTAAGCAAAAATT---AGTTGTCCCTTCAAAG------GGGAAAAAAACAA---------AACCAA----------AAATGTTATCTGTGTTCAGATTGCTACC-GTTTATAAA------GTTGAGGTCTCGTGAATTTTATAGTGCACTAGTGAAGTGGGAG------AAAACAGAAATACTAAGTGACCTGCCCAAGACCACATGGCAAACCACTAGGTATAAGAGATATGAAAAC i canFam3.chr10 I 162 I 5 a score=898647.000000 s hg38.chr22_KI270876v1_alt 103059 257 + 263666 ACAAAAAT-AGTTCCTTCATTCTTAGACTCT---TAGAACTTTCTATTTTTAAGATATTTCTATTTTGAAAAT--AGAGTCTGTTGTACTTAGTTATGGAGGTCACTTCATTTTTTGGTCTATGATCTCAGGCTCTCTCAAGGAAATGAAATAAGGAAATATTTTTATATTTCATTC--CCTCTATTAGCTCTAGAGTTACTACTACTATGTTGCCAA-----AGTATTATAATGATATTATTTATGAA-GAGGAAAGACCTAGCAACAAC----------- s panTro4.chr22 34481044 257 + 49737984 ACAAAAAT-AGTTCCTTCATTCTTAGACTCT---TAGAACTTTCTATTTTTAAGATATTTCTATTTTGAAAAT--AGAGTCTGTTGTACTTAGTTATGGAGGTCACTTCATTTTTTGGTCTATGATCTCAGGCTCTCTCAAGGAAATTAAATAAGGAAATATTTTTATATTTCATTC--CCTCTATTAGCTCTAGAGTTATTACTACTATGTTGCCAA-----AGTATTATAATGATATTATTTATGAA-GAGGAAAGACCTAGCAACAAC----------- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30897074 256 + 46535552 ACAAAAAT-AGTTCCTTTATTCTTAGACTCT---TAGAACTTTCTATTTTTAAGATATTTCTATTTTGAAAATAGAGAGTCTGTTGTACTTAGTTATGGAGGTCACTTCATTTTTTGGTCTATGATCTCAGGCTCTCTCAAGGAAATGAAATAAGGAAATATTTTTATATTTCATTC--CCTCTATTAGCTCTAGAGTTATTACTACTATGTTGCCAA-----AGTATT---ATGATATTATTTATGAA-GAGGAAAAACCTAGCAACAAC----------- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100449716 259 - 115148730 ACAAAAAT-AGTTCCTTTATTCTTAGACTCT---TAGAACTTTCTATTTTTAAGATATTTCTATTTTGAAAACAGAAAGTCTGTTGTACTCAGTTATAGAGGTCACTTCGTTTTTTGGTCTATGATCTCAGGCTCTCTCAAGGAAATGAAATAAGGAAATATTTTTATATTTCATTC--TCTCCATTAGCTCTAGAGTTATTACTACTATGTTGCCAA-----AGTATTATAATGATATTATTTATGAA-GAGGAAAAACCTAGCAACAAC----------- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80597950 259 + 95678458 ACAAAAAT-AGTTCCTTTATTCTTAGACTTT---TAGAACTTTCTATTTTTAAGATATTTCTATTCTGAAAATAGAGAGTCTGTTATACTTAGTTATGGAGGTCACTTCATTTTTTGGTCTATGATCTCAGGCTCTCTCAAGGAAATGAAATAGGGAAATATTTCTATATTTCATTC--CCTCTATTAGCTCTAGAGTTATTACTACTATGTTGCCAA-----AGTATTATAATGATATTATTTATGAA-GAGGAAAAACCTAGCAATAAC----------- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81024776 259 - 96509753 ACAAAAAT-AGTTCCTTTATTCTTAGACTTT---TAGAACTTTCTATTTTTAAGATATTTCTATTCTGAAAATAGAGAGTCTGTTATACTTAGTTATGGAGGTCACTTCATTTTTTGGTCTATGATCTCAGGCTCTCTCAAGGAAATGAAATAGGGAAATATTTCTATATTTCATTC--CCTCTATTAGCTCTAGAGTTATTACTACTATGTTGCCAA-----AGTATTATAATGATATTATTTATGAA-GAGGAAAAACCCAGCAATAAC----------- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76282399 259 + 90941950 acaaaaat-agtTCCTTTATTCTTAGACTTT---TAGAACTTCctatttttaagatatttctaTTCTGAAAATAGAGAGTCTGTTATACTTAGTTATGGAGGTCACTTCATTTTTTGGTCTATGATCTCAGGCTCTCTCAAGGAAATGAAATAgggaaatatttctatatttcattC--CCTCTATTAGCTCTAGAGTTGTTACTCCTATGTTGCCAA-----AGTATTATAATGATATTATTTATGAA-GAGGAAAAACCTAGCAATAAC----------- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18551683 259 + 33263144 ACAAATAT-AGTTCCTTTATTCTTAGACTTT---TAGAACTTTCTATTTTTAAGATATTTCTATTCTGAAAATAGAGAGTCTGTTATACTTAGTTATGGAGGTCACTTCATTTTTTGGTCTATGATCTCAGGCTCTCTCAAGGAAATGAAATAGGGAAATACTTCTATATTTCATTC--CCCCTATTAGCTCTAGAGTTATTACTACTATGTTGCCAA-----AGTTTTGTAATGATATTATTTATGAA-GAGGAAAAACCTAGCAATAAC----------- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198253826 247 + 210400635 ataaaAATAAGTTCCTTTATTCTTAGACTCTTAGTAGAACTTTC------TAAGATATTTCTGTTTTGAAAATAGAGAATCTGCTATACTTAGTTATGGAGGTCACTGCATTTTTTGGTCTATTATCTCAGGCTCTCTCAAAGAAATGAAGTAAGGGAATATTCTTATATTTCATTC--CCTCTATTAACTCTAG---TATTATTACTGTATTGCTAA------------TTATATTATTATTTATGGA-GAGGAGAAACCCAGCAACAAC----------- i calJac3.chr1 I 318 C 0 s mm10.chr15 77117345 265 + 104043685 GTAAAAAT-AGCTCTTCTTGTCTCAGGCTCTGAGGAGAGCCTTCTATTT-TGAGACCTCTCTGTTTTGAAAACAAAGCATCCTTTGTGGTTGGTAGTAGAGGTCACTGACTCTTCAGCTTTATCACCTCAGA--CTGTCAAGGAAACCAGTAAGGCAGAACTTTTAACACTCTATTCTACTCTTATTGGTTTTAGAGTT--TATTATGCTGCTGCCAAAAAAAAGTACTGCAATGATATTACTTATTAATGTAGGAAAACATACTGATGAC----------- i mm10.chr15 C 0 I 238 s canFam3.chr10 40877771 245 - 69331447 ACAAAAAT-TGTACCATTATTCTTAGATTCTTAGTGGAGTTTTCCATTTTTGAGATCTTTCCATTTTGAAAAT--GTAGTCTATTGTATGTAGTTC---AGATCACTGCATTTTT-GGCCTATCAGTTTAGG----------------AAATAAGAGGATCTTTTCATGTTTCATTC--CCTCTATTAGTTCCAGCGTTTATGACTTCAGGTCACCTA-----AGTATCCTAA------TATTCATGAA-GAGGTGACACCTAATGACAATGGGCTTCCACC i canFam3.chr10 I 5 C 0 a score=30600.000000 s hg38.chr22_KI270876v1_alt 103316 8 + 263666 TGAAGAAG s panTro4.chr22 34481301 8 + 49737984 TGAAGAAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30897330 8 + 46535552 TGAAGAGG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100449975 8 - 115148730 TGAAGAAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80598209 8 + 95678458 TGAAGAAG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81025035 8 - 96509753 TGAAGAAG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76282658 8 + 90941950 TGaagaag i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18551942 8 + 33263144 TGAAGAAG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198254073 8 + 210400635 TGAAGAAG i calJac3.chr1 C 0 C 0 s canFam3.chr10 40878016 8 - 69331447 TGAAAGAG i canFam3.chr10 C 0 C 0 e mm10.chr15 77117610 238 + 104043685 I a score=10680.000000 s hg38.chr22_KI270876v1_alt 103324 4 + 263666 Cttc s panTro4.chr22 34481309 4 + 49737984 Cttc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30897338 4 + 46535552 Cttc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100449983 4 - 115148730 Cttc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80598217 4 + 95678458 Cttc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81025043 4 - 96509753 tttc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76282666 4 + 90941950 cttc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18551950 4 + 33263144 Cttc i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40878024 4 - 69331447 CTCT i canFam3.chr10 C 0 C 0 e mm10.chr15 77117610 238 + 104043685 I e calJac3.chr1 198254081 0 + 210400635 C a score=12779.000000 s hg38.chr22_KI270876v1_alt 103328 14 + 263666 ttttttt----------------tggagac s panTro4.chr22 34481313 14 + 49737984 ttttttt----------------tggagac i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30897342 14 + 46535552 ttttttt----------------ttgagac i ponAbe2.chr22 C 0 I 1 s nomLeu3.chr7b 100449987 14 - 115148730 ttttttt----------------ttgagac i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80598221 14 + 95678458 tttttttttttttt---------------- i rheMac3.chr10 C 0 I 20 s macFas5.chr10 81025047 27 - 96509753 ttttcttttttttt---ttttttttgagac i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76282670 30 + 90941950 tttttttttttttttttttttttttgagac i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18551954 21 + 33263144 ttcttttttttttt---------ttgagac i chlSab2.chr19 C 0 C 0 e mm10.chr15 77117610 238 + 104043685 I e canFam3.chr10 40878028 0 - 69331447 C e calJac3.chr1 198254081 0 + 210400635 C a score=27660.000000 s hg38.chr22_KI270876v1_alt 103342 17 + 263666 agagtctcgctct-gtcg s panTro4.chr22 34481327 17 + 49737984 agagtctcgctct-gtcg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30897357 17 + 46535552 agagtctcgctct-gtcg i ponAbe2.chr22 I 1 C 0 s nomLeu3.chr7b 100450001 18 - 115148730 agagtctcgctctggtcg i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81025074 17 - 96509753 ggagtctggctct-gtcg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76282700 17 + 90941950 ggagtctggctct-gtcg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18551975 17 + 33263144 ggagtctggctct-gtcg i chlSab2.chr19 C 0 C 0 e mm10.chr15 77117610 238 + 104043685 I e canFam3.chr10 40878028 0 - 69331447 C e calJac3.chr1 198254081 0 + 210400635 C e rheMac3.chr10 80598235 20 + 95678458 I a score=225747.000000 s hg38.chr22_KI270876v1_alt 103359 95 + 263666 cccaggctcgagtgcagtggtgcaatctcgggtcactgcaagctccacttcccgggttcacgccattctcctgcctcagcctcccgagtagctgg s panTro4.chr22 34481344 95 + 49737984 cccaggcttgagtacagtggtgcgatctcgggtcactgcaagctccgcttcccgggttcacgccattctcctgccttagcctcccgagtagctgg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30897374 95 + 46535552 cccaggccggagtgcagtgatgcgatcttggctcactgcaagctccgcctcccgggttcatgccattctcctgcctcagcctcctgagtagctgg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100450019 95 - 115148730 cccaggctggagtgcagtggcgccatctcagctcactgcaagctctgcttcccaggttcatgccattctcctgcctcagcctcccgagtagctgg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80598255 95 + 95678458 ctggggctggagtgcagtggcacgatcttggctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcccgagtagctgg i rheMac3.chr10 I 20 I 11 s macFas5.chr10 81025091 95 - 96509753 cccaggctggagtgcagtggcgcgatcttggctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcccgagtagctgg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76282717 95 + 90941950 cccaggctggagtgcagtggcgcgatcttggctcactgcaagctccgcctcccaggttcacgctattctcctgcctcagcctcccgagtagctgg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18551992 95 + 33263144 tccaggctggagtgcagtggcgcgatcttggctcactgcaagctctgcctcccaggttcacgccattctcctgcttcagcctcccgagtagctgg i chlSab2.chr19 C 0 C 0 e mm10.chr15 77117610 238 + 104043685 I e canFam3.chr10 40878028 0 - 69331447 C e calJac3.chr1 198254081 0 + 210400635 C a score=4427.000000 s hg38.chr22_KI270876v1_alt 103454 22 + 263666 gacgataggtgc-----ctgccaccac s panTro4.chr22 34481439 22 + 49737984 gactataggtgc-----ctgccaccac i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30897469 22 + 46535552 gactataggcat-----ccgccaccac i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100450114 22 - 115148730 gactacaggcgc-----ccgccaccac i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81025186 11 - 96509753 -actatataggc--------------- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76282812 16 + 90941950 -actatataggcacttg---------- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18552087 11 + 33263144 -actatgtaggc--------------- i chlSab2.chr19 C 0 C 0 e mm10.chr15 77117610 238 + 104043685 I e canFam3.chr10 40878028 0 - 69331447 C e calJac3.chr1 198254081 0 + 210400635 C e rheMac3.chr10 80598350 11 + 95678458 I a score=363433.000000 s hg38.chr22_KI270876v1_alt 103476 153 + 263666 gcccgtctaa-ttttttgtatttttggtagagacggggtttcaccctgttagctaggatggtcttgatctcctgaccttgtgatccgcccgccttggccttccaaagtgttgggattacaggcgtgagccaccgtgcctggccAAGAAGCTTCT s panTro4.chr22 34481461 153 + 49737984 acccgtctaa-ttttttgtatttttggtagagacagggtttcaccctgttagccaggatggtcttgatctcctgaccttgtgatccgcccgccttggccttccaaagtgttgggattacaagcgtgagccaccgtgcctggccAAGAAGCTTCT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30897491 152 + 46535552 gcccgtctaatttttttgtatttttggtagagacggggtttcaccctgttagccaggatggtcttgatctcctgacctcatgatccgcccgccttggccttcc--agtgttgggattacaggcgtgagccaccgcgcctggccAAGAAGCGTCT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100450136 153 - 115148730 gcccgtctaa-ttttttgtatttttggtagagacggggtttcaccctgttagccaggatggtcttgatctcctgacctcgtgatccgcccacctgggccttccaaagggttgggattacaggcgtgagccaccgcgcctggccAAGAAGCTTCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80598361 153 + 95678458 actcggctaa-ttttttgtatttttggtagagacgaggtttcaccctgttagccaggatggtcctgatctcctgacctcgtgatctgcccacctcggccttccaaagtgttgggattacaggcgtaagccaccgcacctggccAAGAAGCTTTT i rheMac3.chr10 I 11 C 0 s macFas5.chr10 81025197 153 - 96509753 actcggctaa-ttttttgtatttttgttagagacgaggtttcaccctgttagccaggatggtcctgatctcctgacctcgtgatctgcccacctcggccttccaaagtgttgggattacaggcgtgagccaccgcacctggccAAGAAGCTTTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76282828 148 + 90941950 -----gctaa-ttttttgtatttttggtagagatgaggtttcaccctgttagccaggatggtcctgatctcctgacctcgtgatccgcccacctcggccttccaaagtgttgggattacaggcgtgagccaccgcacctggccaagaagcTTTT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18552098 153 + 33263144 actcggctaa-ttttttgtatttttggtagagacgaggtttcaccctgttagccaggatggtcctgatctcctgacctcgtgatccgcccacctcggccttccaaagtgttgggattacaggcgtgagccaccgcacttggccAAGAAGCTTTT i chlSab2.chr19 C 0 C 0 e mm10.chr15 77117610 238 + 104043685 I e canFam3.chr10 40878028 0 - 69331447 C e calJac3.chr1 198254081 0 + 210400635 C a score=60448.000000 s hg38.chr22_KI270876v1_alt 103629 20 + 263666 TACTCTGAAACAAATCTGTA s panTro4.chr22 34481614 20 + 49737984 TACTCTGAAACAAATCTGTA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30897643 20 + 46535552 TACTCTGAAACAAATTTGTA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100450289 20 - 115148730 TACTCTGAAACAAATCTGTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80598514 20 + 95678458 TACTCTGAAACAAATCTGTA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81025350 20 - 96509753 TACTCTGAAACAAATCTGTA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76282976 20 + 90941950 TACTCTGAAACAAATCTGTA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18552251 20 + 33263144 TACTCTGAAACAAATCTGTA i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40878028 20 - 69331447 TACTCAGAAACCAATCGGCA i canFam3.chr10 C 0 C 0 e mm10.chr15 77117610 238 + 104043685 I e calJac3.chr1 198254081 0 + 210400635 C a score=614534.000000 s hg38.chr22_KI270876v1_alt 103649 194 + 263666 CTCTCCTCCCTAACTTATGCAATTCCAGCTAACTTTAGTACAGGGGAACCCAACCTTCTGCAGCCCAGAGCAAACTGC-ATTGAGAGAATCTAACTGTTGGAAAAGGCTTT-AGAGACCCTGACTCATCTGCTAATTAGC----ATAAAAAT-------------GCAAGATTTGCACATACCCACAGTTAAAGAG-TATAAATGAGTGTGGGT s panTro4.chr22 34481634 194 + 49737984 CTCTCCTCCCTAACTTATGCAATTCCAGCTAACTTTAGTACAGGGGAACCCAATCTTCTGCAGCCCAGAGCAAACTGC-ATTGAGAGAATCTAACTGTTGTAAAAGGCTTT-AGAGACCCTGACTCATCTGCTAATTAGC----ATAAAAAT-------------GCAAGATTTGCACATACCCACAGTTAAAGAG-TATAAATGAGTGTGGGT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30897663 194 + 46535552 CTCTCCTCCCTAACTTATGCAATTCCAGCTAACTTTAGTACAGGGGAACCCAACCTTCTGCAGCCCATAGCAAACTGC-ATTGAGATAATCTAACTGTTGGAAAAGGCTTT-AGAGACCCTGACTCATCTGCTACTTAAC----ATAAAAAT-------------GCAAGATTTGTACATATCCACAGTTAAAGAG-TATAAATGAGTGTGGGT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100450309 194 - 115148730 CTCTCCTCCCTAACTTATGCAATTCCAGCTAACTTTAGTACAGGGGAACCTAAGCTTCTGCAGCCCAGAGCAAACTGC-ATTGAGACAATCTAACTGTTGGAAAAGGCTTT-GGAGACCCAGACTCGTCTGCTACTTAAT----ATAAAAAC-------------GCAAGATTTGTACATATCCACAGTTAAAGAG-TACAAATGAGTGTGGGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80598534 194 + 95678458 CTCTCCTCCCTAACTTATGCAATTCCAGCTAACTTTAGTCCAGGGGAACCCAACCTTCTGCAGCCCAGAGCAAAGTGC-ATTGAGAGAATCTAACTGTAGGAAAAGGCTTT-AGAGACCCTGACTCATCTGCTACTCAAC----CTAAAAAT-------------GCAAGATTTGTACATATCCACAGTTAAAGAG-TATAAATGAGTGTGGGT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81025370 194 - 96509753 CTCTCCTCCCTAACTTATGCAATTCCAGCTAACTTTAGTCCAGGGGAACCCAACCTTCTGCAGCCCAGAGCAAAGTGC-ATTGAGAGAATCTAACTGTAGGAAAAGGCTTT-AGAGACCCTGACTCATCTGCTACTCAAC----CTAAAAAT-------------GCAAGATTTGTACATATCCACAGTTAAAGAG-TATAAATGAGTGTGGGT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76282996 194 + 90941950 CTCTCCTCCCTAACTTATGCAATTCCAGCTAACTTTAGTCCAGGGGAACCCAACCTTCTGCAGCCCAGAGCAAAGTGC-ATTGAGAGAATCTAACTGTAGGAAAAGGCTTT-AGAGACCCTGACTCATCTGCTACTCAAC----CTAAAAAT-------------GCAAGATTTGTACATATCCACAGTTAAAGAG-TATAAATGAGTGTgggt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18552271 194 + 33263144 CTCTCCTCCCTAACTTATGCAATTACAGCTAACTTTAGTCCAGGGGAACCCAATCTTCTGCAGCCCAGAGCAAAGTGC-ATTGAGAGAATCTAACTGTAGGAAAAGGCTTT-AGAGACCCTGACTCATCTGCTACTCAAC----CTAAAACT-------------GCAAGATTTGTACATATCCACAGTTAAAGAG-TATAAATGAGTGTGGGt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198254081 195 + 210400635 CTCTCCTCCC-----TATGCAATTCCAGCTTACTTTAGTACAGGGAAAACCATCCTTCTGTAATCCAGAGCAAAGTGC-ATTTAGACAATCTAACTGTTGGAAAAGGCTTTGAGAGACCTTGGCTAATCTGCTAGTCAACAACAAAAAAAAA-------------GCAAGAGTTGTACATATCCACAGTTAAAGAGCTGTGGATGAGTGTGGGT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40878048 200 - 69331447 CTCTCCTCCTCATC-CACGTCATTCCAGCTGATGTCAGCAC--GGGACCCCAGGCTCCTGCAGCCCAGAGCAAAACCCTATTCACAAAAT----CTGCTGGGAGAGGCTTT-ATGGGCTCTGGGCAGCCTACTGGATGAC----ATGTAAACATGTCATGTAAAAGCTAGGTCTGTGTACACCAGCAGTGAAAG-G-TACATGTAAGTGTGGGT i canFam3.chr10 C 0 I 2 e mm10.chr15 77117610 238 + 104043685 I a score=1894590.000000 s hg38.chr22_KI270876v1_alt 103843 674 + 263666 ATGCatttatttatttattta---ttttttaattttttactttttGCACTCATTTTAATGGGttgtgcatggtaacccaatacgctcacacatgcacacaagaatcacatgcagaaatcaaagtttcaagacaggacagctactg-tatgtgcctgcactctgttattttctagtttgttttcctttttcttaactaccataacccggtaaattgaatttacaacccactaagaggtcacagcctgaggaccggaaaacagtgAACTAAACAACCTCTTTGAGCACTCTGGTGCTTCCAGAAAACCACGTTTTTGCTGCAGCATCCTCAGCACCATT---CCACAAGGAGGGAGGCAACTCAT-CCCATGTTCCCATGTTACACAGGAGGAGACAGAACAGGGAGCTCTCCGTGGGCCACCCCATTAAGCCAGTCGGAGCACCTGGACTCAGATCTCCCAAACTTCATCTGATTTCCACTCAATCACGC-TGCCTTTCCACGTGGCTTTTAAAATCATTGCTAAGCCTTGTTTCCATGATGCCACACTCAAGTTTTAAGTGAAAATATATTACAAAATAAAAACTTTTTTTTGAAACTATACTGCTGCAGAAAAAGCACAC-GCCAAGAGTCTGCATTTTGGGTGTGGTGGGTGG------GAAAAACCTACAACATGAGGTCTACAGGG--------- s panTro4.chr22 34481828 666 + 49737984 ATGCatttatttatttattt-----------tttttttaCTTTTTGCACTCATTTTAATGGGttgtgcatggtaacccaatacgctcacatatgcacacaagaatcacatgcagaaatcaaagtttcaagacaggacagctactg-tatgtgcctgcactctggtattttctagtttgttttcctttttcttaactagcataacccagtaaattgaatttacaacccactaagaggttacagcctgaggaccggaaaacagtgAACTAAACAACCTCTTTGAGCACTCTGGTGCTTCCAGAAAACCACGTTTTTGCTGCAGCatcctcagcaccatt---ccacaaggagggaggcaactcat-cccatgttcccatgttacacaggaggagacagaacagggagctctccgtgggccacctcattaagccagtcggagcacctggactcagatctcccaaacttcatgtgatttccactcaatcacgc-tgcctttcCACGTGGCTTTTAAAATCATTGCTAAGCCTTGTTTCCACGATGCCACACTCAAGTTTTAAGTGAAAATCTATTACAAAATAAAAACTTTTTTTTGAAACTATACTGCTGCAGAAAAATCACAC-GTCAAGAGTCTGCATTTTGGGTGCAGTGGGTGG------GAAGAACCTACAACATGAGGTCTACAGGG--------- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30897857 669 + 46535552 ATGCatttatttatttattt---------ttattttttaCTTTTTGCACTCATTTTAATGGGTTGTGCAAGGTAACCCAATATGCTCACGCATGCACACAAGAATCACATGCAgaaatcaaagtttcacgacaggacagctactg-tatgtgcctgcactctggtattttctaatttgttttcctttttcttacctagcataacccagtaaattgaatttacaacccactaagaggtcacagcctgaggactggaaaacagtgAACTAAACAACCTCTTTGAGGACTCTGGCGCTTCCAGAAAACCACA-TTTTGCTGCAGCATCCTCAGCACCATTCCACCACAAAGAGGGAGGCAACTCAT-CCCATGTTCCCATGTTACACAGGAGGAGACAGAACAGGGGGCTCTCCATGGGCCACCCCATTAAGCCAGTCGGAGCACTT-GACTCAGATCTCCCAAACTTCATGGGA-TTCCACTCAATCACGC-TGCCTTTCCACGTGGCTTTCAAAATCATTGCTAAGCCTTTTTTCCATGATGCCACACTCAAGTTTTAAGTGAAAATCTATTAAGAAATAAAAACTTTTTTTGGAAACTATACTGCTGCAGAAAAAGCACACTGTCAAGAGTCTGCATTTCGGGTGCAGTGGGTGG------GAAGAACCTACAACATGAGGTCTACAGGG--------- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100450503 640 - 115148730 ATGCGtttatttatttttat---------ttattttttactttttGGACTCATTTTAATGGGttgtgcatggtaacccaatatgctcacacatgcacacaagaatcacatgcagaaatcaaagtttcaagacaggatagctactgttatgtgcctgcactctggtattttctagtttgttttcctttttcttacctagcataacccagtaaattgaatttacaacccactaagaggtcacagcctgaggactggaaaacagtgAACTAAACAACCTCTTTGAGCACTCTGGCGCTTCCAGAAAACCATG-TTTTGCTGCAGCATCCTCAGCACCATT---CCACAACGAGGGAGGCAACTCAT-CCCATGTTCCCATGTTACACAGGAGGAGACAGAACAG-------------------CCCATTAAGCCAGTCGGAGCACTTGGACTCGGATCTCCCAAACTTCCTGTGATTTCCACTCAATCACGC-TGCCTTTCCACGTGGCTTTCAAAATCATTGCTAAGCCTTGTTTCCATGATGCCACACTC-------AAGTGAAAATATATTACGAAATAAAAACTTTCTTTGGAAACTCTACTGCTGCGGAAAAAGAACACTGCCGAGAGTCTGCATTTCGGGTGCAGTGGGTGG------CAAGAACCT---ACATGCGGTCTGTAGGG--------- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80598728 670 + 95678458 ATGCatttatttatttatat---------ttattttttaCTTTTTGGACTCAGTTTAATGGGttgtgcatggtaacccaatatgctcacacatgcacacaagaatcatatgcagaaatcaaagtttcaagacaggacagctactg-tatgtgcctgcacgctggtattttctagtttgttttcctttttcttacctagcataacccattaaattgaatttacaacccactaagaggtcacagcctgtggactggaaaacagtgAACTAAACAACCTCTCTGAGCACTCTGGCGCTTGCGGAAAACCAGG-TTTTGCTGCAGCATCCTCAGCACCATT---CCACGAGGAGGGAGGCAACGCAT-CCCAAGTCCCCACGACACACAGGAGGAGACAGAACAG-GGGCTCTCCGTGGGCCACCCCATTAAGCCAGTCGGAGCACTTGGACTCAGATCTCCCAAACTTCATGCGATTTCCACTCCATCATGC-TGAATTTCCATGTGGCTTTCAAAATCATTGCTAAGCGCTGTTTCCATGACGCCACACTCACGTTTTAAGTGAAAATCTATTACGAAATAAAAACTTTTTTTGGAAACTATACTGCTGCAGAGAAAGCACACTGTCAAGAGTGTGCATTTCGGGTGCAGTGGGTGG---GAAGAAGAACCTACAACATGTGGTCTACATGG--------- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81025564 670 - 96509753 ATGCatttatttatttatat---------ttattttttactttttGGACTCAGTTTAATGGGttgtgcatggtaacccaatatgctcacacatgcacacaagaatcatatgcagaaatcaaagtttcaagacaggacagctactg-tatgtgcctgcacgctggtattttctagtttgttttcctttttcttacctagcataacccagtaaattgaatttacaacccactaagaggtcacagcctgtggactggaaaacagtgAACTAAACAACCTCTCTGAGCACTCTGGCGCTTGCGGAAAACCACG-TTTTGCTGCAGCATCCTCAGCGCCATT---CCACGAGGAGGGAGGCAACGCAT-CCCATGTCCCCACGACACACAGGAGGAGACAGAACAG-GGGCTCTCCGTGGGCCACCCCATTAAGCCAGTCGGAGCACTTGGACTCAGATCTCCCAAACTTCATGCGATTTCCACTCCATCATGC-TGAATTTCCATGTGGCTTTCAAAATCATTGCTAAGCGCTGTTTCCATGACGCCACACTCAAGTTTTAAGTGAAAATCTATTACGAAATAAAAACTTTTTTTGGAAACTATACTGCTGCAGAAAAAGCACACTGTCAAGAGTGTGCATTTCGGGTACAGTGGGTGG---GAAGAAGAACCTACAACATGTGGTCTACATGG--------- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76283190 670 + 90941950 atgcatttatttatttatat---------ttattttttactttttggacTCAGTTTAATGGGTTGTGCATGGTAACCCAAtatgctcacacatgcacacaagaaTCATATGCAGAAATCAAAGTTTCAAGACAGGACAGCTACTG-CATGTGCCTGCACGCTggtattttctagtttgttttcctttttcttacctAGCATAACCCAGTAAATTGAATTTACAACCCACTAAGAGGTCACAGCCTGTGGACTGGAAAACAGTGAACTAAACAACCTCTCTGAGCACTCTGGCGCTTCCAGAAAACCACG-TTTTGCTGCAGCATCCTCAGCACCATT---CCACAAGGAGGGAGGCAACTCAT-CCCATGTCCCCACGATACACAGGAGGAGACAGAACAG-GGGCACTCCATGGGCCACCCCATTAAGCCAGTCGGAGCACTTGGACTCAGATCTCCCAAACTTCATGCGATTTCCACTCCATCACGC-TGAATTTCCATGTGGCTTTCAAAATCATTGCTAAGCGCTGTTTCCATGACGCCACACTCAAGTTTTAAGTGAAAATCTATTacgaaataaaaactttttttggaaACTATACTGCTGCAGAAAAAGCACACTGTCAAGAGTGTGCATTTCGGGTGCAGTGGGTGG---GAAGAAGAACCTACAACATGTGGTCTACATGG--------- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18552465 666 + 33263144 atgtatttatttatt----t---------ttattttttactttttGGACTCAGTTTAATGGGttgtgcatggtaacccaatatgctcacacatgcacacaagaatcatatgcagaaatcaaagtttcaagacaggacagctactg-tatgtgcctgcacgctggtattttctagtttgttttcctttttcttacctagcataacccagtaaattgaatttacaacccactaagaggtcacagcctgtggactgcaaaacagtgAACTAAACAACCTCTCTGAGCACTCTGGCGCTTCCAGAAAACCACG-TTTTGCTGCAGCATCCTCAGCACCATT---CCACGAGGAGGGAGGCAACTCAT-CCCATGTCCCCACGATACACAGGAGAAGACAGAACAG-GGGCTCTCCGTGGGCCACCCCATTAAGCCAGTCGGagcacttggactcagatctcccaaacttcatgcgatttccactccatcacgc-tgcctTTCCATGTGGCTTTCAAAATCATTGCTAAGCCCTGTTTCCATGACGCCACACTCAAGTTTTAAGTGAAAATCTATTACAAAATAAAAACTTTTTTTGGAAACTATGCTGCTGCAGAAAAAGCACACTGTCAAGAGTGTGCATTTCGGGTGCAGTGGGTGG---GAAGAAGAACCTACAACATGTGGTCTACATGG--------- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198254276 691 + 210400635 ATGCGtttatttatttttttaatttcttttttttcttaactttttaaattCATTTCAATGAGttgtgcatggtaacccaatatgcttacacacgcacacaagaatcacatgcagaaatcaatgtttcaaggcaggacagttactg-tatgtgtctacgctctggtattttctagtttgttttcatttttcttacctagcataagccagtaaattgaattcataacccactaagaggtcacagcctgaggtctggaaaacagtgAACTAAACAACCTCTTCAAGCACTCAGGTACTTCT-GAAAACCACT-TTTTGCTACAGTATCCTCAGCATCATT---CAGCAAGGAGGGAGGCAACTCATCCCCACGTCCCCATGTCACACTGAAGGAGACAGAACGG--GGCTTCCCATGGGCCACCCACATAAGTCAGTCAGAGCACTTGGACTCAGATTTCCCAAATTTCATGAGATTTCCACTCAATCACACTTGCCTTTCCACGTGGCTTTCAAAGTCATTACTAAGCCTTGTTTCCATGATGCCACACTCAAGTTTTAAGCGAAAATCTATTATGAAATGGAAACTTTTTTGGGAAACTATACTGCTGCAGAAAAAGCAGACTGTCAAGAGTCTCCGTTCTGGCTGCAGTGGGTGGGGGGAAGAAGAATCTACAACATGTGGTCCATGTGGTCTACAGGG i calJac3.chr1 C 0 I 302 e mm10.chr15 77117610 238 + 104043685 I e canFam3.chr10 40878248 2 - 69331447 I a score=4677931.000000 s hg38.chr22_KI270876v1_alt 104517 1620 + 263666 TAGCTGCTTTTCAAAAGCGAGTTTGGGGGGGCACAGCGTGGA-GGGGGTGACCACTAGAATGGTCATTGAACAGTCATTTGCTGTTCTCCAATCAGGAAACTCCAGCAGCTGCAGAGAACATCCGGAATCAGAAGTGAACACCTGAATAATGACCTTCCGGGCCATAAAGATGGTCTTCTGATGAGAAAGCCAGGGCCCCCAGACACCACGTGTCCTGCATGGAATCACTGATTGGCCAATAGCAGGGCCCACAAGGAAGCCTGGAACTTTCAAGGACGGCCCCACACTACTCT-AAAAATGTTTCCACCACCAATACCCGCTTGAATGGGCCCATGCCTGTAAGGAAGGCACTATCAACTCACACCAATTCCAAAGGAAGAAATCCAGGCTCAGGGGCTTCCCAGTGAAGACAGGCACAC------CCCCCTGAAAACCACACCCTAGACTACAATGCATGGTCCTCTGCTGGACAGACCCCGTGGCCCGTCCTCAGGATGCCAGAACAGGCTGCTCAGTGACATGCGCTGAAGCGGGCAGGGACGGGCACTGGGAGATCCTGCCTGTGCAGAAAAAGTCCTCCCAGGAAGCAAACCACATTTCCAATCTGGTGAATCACGCTCAGT-AAAATAAAATCCAGGCCAATCAGCTATGCCTTCAACTCAAAA-GAATCTGAAGAGTACATAAGTTAGTTACACATTGTCACCAAAGCAGTTAGGGAGAGCTTCTGATATGCTGAAAACCAAGGGAAAGGGGATGGAGATGAACAAAAATGATCTCATTAGGCCAGAGGCAGGCGAAGTCACACCACTTCTGGAAAAGTGTAACAATAAGGCAAGAACTCAGGTTCCCACGGAGAGGCACATGGGCTGAGGGTGACTGGGTGCCTGCAGGCAAATTCCTTAACCTCCCTGCCCTCCTGGCACCTCATGCCCGACATAGCCTCTGGTATTGGGAGTGGTGCGGTATCAGACAGCTGCTCTCCTTCAGGCCAGCCTTTGCTGTCcacgcagggaggcaggcaggcagtcaggcagtcattcaggtagAAGACTTTCTAAGGCTTCCACTGCCCAAGGGCTGCATGGGCATCCTTCAATGAAGACAGATGCTTGGTGGTCACTATCCCCATTCTTCTTCAATCTCATCCTCCTTGTGGTTTTAGAAGCCGCGGACCAAGTCCTGCAGGTTCTTGTCGAACATGCAGTCGATGATGCCCTTCACCATCTTGAGGGCCATGGTGGTGGCCCATGGGCTTTTGCCCCGGGAGGCCCGCAGCTGGTTGCCGTGAGAGGGCCCGGGGGCCGCGACCACCGCCGGCAGATTGCTGCGTTGCCGGCCGCTGCGGTGGGGCAGGCTCCTAGGCCAGGGCGGTGGCAGGGTTTGAGGACCGTGACAGAGGTGGCGACCCACTCCACAGAGGGCGCGATCCCACTCCAGGCCTCTTGCAAAGGGTGGACATGCATTTAtttatttttattttattatta---tttttttcaattgagacagtgtctcactctgtcccccaggctgaagtataatagcgagatcaaaactcactgcagcctcaacctcctgggttcaagtgatcctcccacctcagcctcccgaatggctggcactaca s panTro4.chr22 34482494 1617 + 49737984 TAGCTGCTTTTCAAAAGCGAGTTTGGGGGGGCACAGCGTGGA-GGGGGGGACCACTAGAATGGTCATTGAACAGTCATTTGCTGTTCTCCAATCAGGAAACTCCAGCAGCTGCAGAGAACATCCGGAATCAGAAGTGAACACCTGAGTAACGACTTTCCGGGCCATAAAGATGGTCTTCTGATGAGAAAGCCAGGGCCCCCAGACACCACGTGTCCTGCATGGAATCACTGATTGGCCAATAGCAGGGCCCACAAGGAAGCCTGGAACTTTCAAGGACGGCCCCACACTACTCT-AAAAATGTTTCCACCACCAATACCCGCTTGAATGGGCCCATGCCTGTAAGGAAGGCACTATCAACTCACACCAATTCCAAAGGAAGAAATCCAGGCTCAGGGGCTTCCCAGTGAAGACAGGCGCAC------CCCCCTGAAAACCACACCCTAGACTACAATGCATGGTCCTCTGCTGGACAGACCCCGTGGCCCGTCCTCAGGATGCCAGAACAGGCTGCTCAGTGACATGCGCTGAAGGGGGCAGGGACGGGCACTGGGAGATCCTGCCTGTGCAGAAAAAGTCCTCCCAGGAAGCAAACCACATTTCCAATCTGGTGAATCACGCTCAGT-AAAATAAAATCCAGGCCAATCAGCTATGCCTTCAACTCAAAAGGAATCTGAAGAGTACATAAGTTAGTTACACATTGTCACCAAAGCAGTTAGGGAGAGCTTCTGAGATGCTGAAAACCAAGGGAAAGGGGATGGAGATGAACAAAAATGATCTCATTAAGCCAGAGGCAGGCGAAGGCACACCACTTCTGGAGAAGTGTAACAATAAGGCAAGAACTCAGGTTCCCAGGGAGAGGGACATGGGCTGAGGGTGACTTGGTGCCTGCAGGCAAATTCCTTAACCTCCCTGCCCTCCTGGCACCTCATGCCCGACATAGCCTCTGGTATTGGGAGTGGTGTGGTATCAGACGGCTGCTCTCCTTCAGGCCAGCCTTTGCTGTCCACgcagggaggcaggcagg----caggcagTCACTCAGGTAGAAGACTTTCTAAGGCTTCCACTGCCCAAGGGCTGCACGGGCATCCTTCAACGAAGACAGATGCTTGGTGGCCACTATCCCCATTCTTCTTCAATCTCATCCTCCTTGTGGTTTTAGATGCCGCGGACCAAGTCCTGCAGGTTCTTGTCGAACATGCAGTCGATGATGCCCTTCACCATCTTGAGGGCCATGGTAGTGGCCCATGGGCTTTTGCCCCGGGAGGCGCGCAGCTGGTTGCCGTGAGAGGGCCCGGGGGCCGTGACCACCGCTGGCAGATTGCTGCGCTGCCGGCCGCTGCGGTGGGGCAGGCTCCTAGGCCAGGGCGGTGGCAGGGTTTGAGGACCGCGACAGAGGTGGCGACCCACTCCACAGAGGGCGCGATTCCACTCCAGGCCTCTTGCAAAGGGTGGACATGCATTTAtttatttttattttattatta---tttttttcagttgagacagtgtctcactctgtcacccaggctgaagtataatagcgagatcaaaactcactgcagcctcaacctcctgggttcaagtgatcctcccacctcagcctcccgaatggctggcactaca i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30898526 1617 + 46535552 TAGCTGCTTTTCAAAAGCGAGTTTCGGGGGGCACAGCGTGCAGGGGGGGGGGCACTAGAATGGTCATTGAACAGTCATTTGCTGTTCTCCAATCAGGAAACTCCAGCAGCTGCAGAGAACACCCGGAATCAGAAGTGAACACCTGAGTAACGACCTTCCGGGCCATAAAGATGGTCTTCTGATGAGAAAGCCAGGGACCCCAGACACCACATGTGCTGCATGGAATCGCCGATTGGCCAATAGCAGGGCCCACGAGAAAGCCTGGAACTTTCAAGGACGGCCCCGCACTACTCT-AAAAATGTTGCCACCACCAATACCCGCTTGAATGGGCCCATGCCTGTAAGGAAGGCACTATCAACTCACACCAATTCCAAAGGAAGAAACCCAGGCTCAGGGGCTTCCCAGTGAAGACAGGCACAC------CCCCCTGAAAACCACATCCCAGACTAGAGTGCATGGTCCTCCACTGGACAGACCCTGTGGCCTGTCCTCAGGATGCCAGAACAGGCTGCTCAGTGACATGTGCTGAAGGGGGCAGGGACGGGCACTGAGAGATCCTGCCCGTGCAGAAAAAGTCCTCCCAGGAAGCAAACCGCATTTCCAATCTGGTGAATCACGCTCAGT-AAAATAAAATCCAGGCCAATCAGCTATGCCTTCAACTCAAAAGGAATCTGAAGAGTACATAAGTTAGTTACACATTGTCACCAAAGCAGTTGGGGAGAGCTTCTGAGATGCTGAAAACCAAGGGAAAGGGGATGGAGATGAACAAAAATGATCTCATTAAGCCAGAGGCAGGCGAAGCCACACCACTTCTGGAAAAGTGTAACAATAAGGCAAGAACTCAGGTTCCCAGGGAGGGGGACATGGGCTGAGGGTGACTTGGTGCCTGCAAGCAAATTCCTTAACCTCCCTGCCCTCCTGGCACCTCATGCCCGACACAGCCTCTGGTATTGGGAGTGGTGCGGTATCAGACGGCTGCTCTCCTTCAGGCCGGCC-TTGCTGTCCATgcagggaggcaggcagg----caggcagTCACTCAGGTAGAAAACTTTCTAAGGCTTCCACTGCCCAAGGGCTGCACAGGCATCCTTCAACGAAGACAGACGCTTGGTGGCCACTATCCCCATTCTTCTTCAATCTCATCCTCCTTGTGGTTTTGGATGCCACGGACCAAGTCCCGCAGGTTCTTGTTGAACATGCAGTCAATGATGCCCTTCACCATCTTGAGGGCCATGGTGGTAGCCCATGGGCTTTTGCCCCGGGAGGCCCGAAGCTGGTTGCCGTGAGAGGGCCCGGGGGCTGCAACCACCGCCGGCGGACTGCTGTGCTGCCGGCCACTGCAGTGCGGCAGGCTCCTAGGCCAGGGCAGTGGCAGAGTTCGAGGACCACGACAGAGGTGGCGACCCACTCCACAAGGGCCGCGATCCTACTCCAGGCCTCTTACAAAGGGCGGACATGCATTTAtttatttttattttattatca---tttttttcaattgagacagtgtctcactctgtcacccaggctggagtataatagcaagatcgaaactcactgcagcctcaatctcctgggttcaagtgatcctcccacctcagcctcccgaatggctggcactaca i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100451143 1611 - 115148730 TAGCTGC-TTTCAAAAGCGAGTTTGGGGGGGCACAGCGTGGA-GGGGGGGACCACCAGAACGGTCATTGAACAGTCATTTGCTGTTCTCCAATCAGGAAACTCCAGTAGCTGCAGAGAACATCCAGAATCAGAAGTGAACACCTGAGTAACGACCTTCCGGGCCATAAAGATGGTCTTCTGATGAGAAAGCCAGGGCCCCCAGACACCGCGTGTCCTGCATGGAATCGCCGAATGGCCAATAGCAGGGCCCATGAGGAAGACTGGGACTTTCAAGGATGGCCCTGCACTACTCT-AAAAATGTTTCCACCACCAATACTCGCTTGAACGGGCCCATGCCTGTAAGGAAGGCACTATCAACTCACACCAATTCCAAAGGAAGAAACCCAGGCTCAGGGGCTTCCCAGTGAAGACAGGCACGC------CCCCCTGAAAACCACACCCCAGACTAGAGTGCGTGGTCCTCCACTGGACAGACACTTTGGCCCGTCCTCAGGATCCCAGAACAGGCTGCTCAGTGACATGCGCTGAAGGGGGCAGGGACGGGCACTGGGAGATCCAGCCTGTGCAGAAGAAGTCCTCCCAGGAAGCAAACCACATTTCCAATCTGGTGAATCATGCTCAGT-AAAATAAAATCCAGGCTAATCAGCTATGCCTTCAACTCAAAATGAATCTGAAGAGTACATAAGTTAGTTACACATTGTCACCAAAGCAGTTACGGAGAGCTTCTGAGATGCTGAAAACCAAGGGAAAGGGGATGGAGATGAACAAAAATGATCTCATTAAGCCAGAGGCAGGCGAAGCCACACCACTTATGGAAAAGTGTAACAATAAGGCAAGAACTCAGGTTCCCAGGGAGAGGGACATGGGCTGAGGGTGACTTGGTGCCCGCAGGCAAATTCCTGAACTTCCCTGCCCTCCTGGCACCTCATGCCTGACACAGCCTCTGGTATTGGGAGTGGTGCGGTATCAGACGGCTGCTCTCCTTCAGGCCGGCC-TCGCTGTCcacgcagggaggcagg--------caggcagtcactcaggtagAAGACTTTCTAAGGCTTCCACTGCCCAAGGGCTACATGGGCATCCTTCAATGAAGACAGACGCTTGGTGGCCACTGTCCCCATTCTTCTTCAATCTCATCCTCCTTGTGGTTTCAGATGCCATGGACCAAGTCCTGCAGGTTCTTGTCAAACATACAGTCGATGATGCCCTTCACCATCTTGAGGGCCATGGTGGTGGCCCATGGGCTTTTG-CCCGGGAGGCCCGCAGCTGGTTGCCGTGAGAGGGCCCAGGGGCCGCAAACACCGCCGGCGGATCGCTGTGCTGCCGGCCGCTGTGGTGGGGCAGGCTCCTAGGCCAGGGCGGTGACAGGGTTTGAGGACCGAGGCAGAGGTGGTGACCCGCTCCACAGGGGCCGCGATCCCACTCTGGGCCTCTTGCAAAGGGCGGACATGAATTTATTTAtttttattttattattg--ttttttttcaattgagacagtgtctcactctgtcacccaggccggagtataatagcaagatcaaaactcactgcagcctcaacctcctgggttcaagtgatcctcccacctcagcctcccgaatggctggcactaca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80599398 1611 + 95678458 TAGCTGCTTTTCAAAAGCGAGTTTTTGGGGGCACAGCG---A-GGGAGGAACCACTAGAACTGTCATTGAACAGTCATGTGCTTCTCTCCAATCAGGAAACTCCAGCAGCTGCAGAGAACATCCAGAATCAGAAGCGAACACCTGAGTCAGGACCTTCTGGGCCATAAAGATGGTCTTTTGATGAGAAAGCCAGGGCCCCCAGACACCACGTGTCCTGCATGGAATCACCAATTGGCCAATAGCAGGGCCCACGAGGAAGCCTAGGA-TTTCAAGGACGGCCCCGCACTACTCT-AAAAATGTTTCTACCACCAATACACACTTGAATGGGCCCATGCCTGTAGGGAAGGCATTATCAACTCACACCAATTCCAAAGGAAGAAACCCAGGCTCAGGGGCTTCCCAGTGAAGACAGGTACAG------TTCCCTGAAAACCACGCCCCAGACTAGAGTGCATGGTCCTCCACTGGACAGACCCCGTGGCCCGTCCTCAGGATCCCAGAACAGGCTGCTCAGTGACATGCACTAAAAGTGGCAGGGACGGGCACTGGGAGATCCTGCCTATGCAGAAAAAGTCCTCCCAGGAAGCAAACCACATTTCCAATCTGGTGAATCACGCTCAGT-AGAATAAAATCCAGGCCAATCAGCTATGCCTTCAACTCAAAAGGAATCTGAAGAATACATAAGTTAGTTACACACTGTCACCAAAGCAGTTAGGGAGAGCTTCTGAGATGATGAAAACCAGGGGAAAGGGGATGGAGATGAACAAAAATGATCTCATTAAGCCAGAGGCAGGTGAAGCCACACCACTTCTGGAAAAGTGTAACAATAAGGCAAGAACTCAGGTTCCCAGGGAGAGGGACATGGGCTAAGGGTGACTTGGTGCCCGCAGGCAAATTGCTTAACTTCCCTGCCCTCCTGGCACCTCATGCCCGACACAGCCTCTGGTATTGGGAGTGGTGCGGTATCAGAGGGCTGCTCTCCTTCAGGCCGGCC-TTGCTGTCCACACCGGGAGGCAGG--------CAGGCAGTCACTCAGGTAGAAGACCTTCTAAGGCTTCCACTGCCCAAGGGCTGCAAGGGCATCCTTCAATGAAGACAGACGCTTGGTGGCCACTATCCCCATTCTTCTTCAATCTCATCCCCCTTGTGGTTTCGGATGCCGCGGACCAAGTCCTGCAGGTTCTTGTCAAACATGCAGTTGATGATGACCTTCACCATCTTGAGGGCCATACTGGTGGACCACAGGCTTCTGCCCCAGGAGGCCCACGGCTGCTTGCCGTGAGAGGGCCCGGGGGCTGCAACTACTGCCAGCGGATCGCTGAGCTGCCAGCCGCTGTGGTGGGGCAGGCTCCTAGGCCAGCGCAGTGGCGGGGTTCGAGGACCGCGGCAGAGGCTGCGACCTGCTCCACAGGGGCTGCGATCCCACTCAGGGCCTCTTGCAAACGGCAGACAAGCATTTATTTAtttttattttgttatttatttatttttcaattgagacagtgtctcactctgccacccaggctggagtataatagcgagatcaaaactcactgcagcctcaacctcctgggttcaagtgatccttccacctcagcctcccaaatggctggcactaca i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81026234 1611 - 96509753 TAGCTGCTTTTCAAAAGCGAGTTTGGGGGGGCACAGCG---A-GGGAGGAACCACTAGAACTGTCATTGAACAGTCATGTGCTTCTCTCCAATCAGGAAACTCCAGCAGCTGCAGAGAACATCCAGAATCAGAAGCGAACACCTGAGTCAGGACCTTCTGGGCCATAAAGATGGTCTTTTGATGAGAAAGCCAGGGCCCCCAGACACCACGTGTCCTGCATGGAATCACCAATTGGCCAATAGCAGGGCCCACGAGGAAGCCTAGAA-TTTCAAGGACGGCCCCACACTACTCT-AAAAATGTTTCTACCACCAATACACACTTGAATGGGCCCATGCCTGTAGGGAAGGCACTATCAACTCACACCAATTCCAAAGGAAGAAACCCAGGCTCAGGGGCTTCCCAGTGAAGACAGGTACAG------TGCCCTGAAAACCACGCCCCAGACTAGAGTGCATGGTCCTCCACTGGACAGACCCCGTGGCCCATCCTCAGGATCCCAGAACAGGCTGCTCAGTGACATGCACTAAAAGTGGCAGGGACGGGCACTGGGAGATCCTGCCTATGCAGAAAAAGTCCTCCCAGGAAGCAAACCACATTTCCAATCTGGTGAATCACGCTCAGT-AGAATAAAATCCAGGCCAATCAGCTATGCCTTCAACTCAAAAGGAATCTGAAGAATACATAAGTTAGTTACACACTGTCACCAAAGCAGTTAGGGAGAGCTTCTGAGATGATGAAAACCAAGGGAAAGGGGATGGAGATGAACAAAAATGATCTCATTAAGCCACAGGCAGGTGAAGCCACACCACTTCTGGAAAAGTGTAACAATAAGGCAAGAACTCAGGTTCCCAGGGAGAGGGACATGGGCTAAGGGTGACTTGGTGCCCGCAGGCAAATTGCTTAACTTCCCTGCCCTCCTGGCACCTCATGCCCGACACAGCCTCTGGTATTGGGAGTGGTGCGGTATCAGAGGGCTGCTCTCCTTCAGGCTGGCC-TTGCTGTCCACACCgggaggcagg--------caggcagtcactcaggtagAAGACCTTCTAAGGCTTCCACTGCCCAAGGGCTGCAAGGGCATCCTTCAATGAAGACAGACGCTTGGTGGCCACTATCCCCATTCTTCTTCAATCTCATCCCCCTTGTGGTTTCGGATGCCGCGGACCAAGTCCTGCAGGTTCTTGTCAAACATGCAGTTGATGATGACCTTCACCATCTTGAGGGCCATACTGGTGGACCACAGGCTTCTGCCCCAAGAGGCCCACGGCTGCTTGCCGTGAGAGGGCCCGGGGGCTGCAACTACTGCCAGCGGATCGCTGAGCTGCCAGCCGCTGTGGTGGGGCAGGCTCCTAGGCCAGCGCAGTGGCGGGGTTCGAGGACCGCGGCAGAGGCTGCGACCTGCTCCACAGGGGCCGCGATCCCACTCAGGGCCTCTTGCAAACGGCAGACAAGCATTTATTTAtttttattttgttatttatttatttttcaattgagacagtgtctcactctgccacccaggctggagtataatagcgagatcaaaactcactgcagcctcaacctcctgggttcaagtgatccttccacctcagcctcccaaatggctggcactaca i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76283860 1609 + 90941950 TAGCTGCTTTTCAAAAGCGAGTTT-GGGGGACACAGCA---A-GGGAGGAACCACTAGAACTGTCATTGAACAGTCATGTGCTTCTCTCCAATCAGGAAACTCCAGCAGCTGCAGAGAACATCCAGAATCAGAAGCGAACACCTGAGTAAGGACCTTCTGGGCCATAAAGATGGTCTTTCGATGAGAAAGCCAGGGCCCCCAGACACCACGTGTCCTGCATGGAATCACCAATTGGCCAATAGCAGGGCCCACGAGGAAGCCTAGGA-TTTCAAGGACGGCCCCGCACtactct-aaaaatgtttctaccACCAATACACACTTGAATGGGCCCATGCCTGTAGGGAAGGCACTATCAACTCACACCAATTCCAAAGGAAGAAACCCAGGCTCAGGGGCTTCCCAGTGAAGACAGGTACAG------TCCCCTGAAAACCATGCCCCAGACTAGAGTGCATGGTCCTCCACTGGACAGACCCCGTGGCCCGTCCTCAGGATCCCAGAACAGGCTGCTCAGTGACATGCACTAAAAGGGGCAGGGACGGGCACTGGGAGATCCTGCCTATGCAGAAAAAGTCCTCCCAGGAAGCAAACCACATTTCCAATCTGGTGAATCACCCTCAGT-AGAATAAAATCCAGGCCAATCAGCTATGCCTTCAACTCAAAAGGAATCTGAAGAATACATAAGTTAGTTACACACTGTCACCAAAGCAGTTAGGGAGAGCTTCTGAGATGATGAAAACCAAGGGAAAGGGGATGGAGATGAACAAAAATGATCTCATTAAGCCAGAGGCAGGTGAAGCCACA-CACTTCTGGAAAAGTGTAACAATAAGGCAAGAACTCAGGTTCCCAGGGAGAGGGACATGGGCTAAGGGTGACTTGGTGCCCGCAGGCAAATTGCTTAACTTCCCTGCCCTCCTGGCACCTCATGCCCGACACAGCCTCTGGTATTGGGAGTGGTGCGGTATCAGAGGGCTGCTCTCCTTCAGGCCGGCC-TTGCTGTCCACAccgggaggcagg--------caggcagtcaCTCAGGTAGAAGACCTTCTAAGGCTTCCACTGCCCAAGGGCTGCAAGGGCATCCTTCAACGAAGACAGACGCTTGGTGGCCACTATCCCCATTCTTCTTCAATCTCATCCCCCTTGTGGTTTCGGATGCCGCGGACCAAGTCCTGCAGGTTCTTGTCAAACATGCAGTTGATGATGACCTTCACCATCTTGAGGGCCATACTGGTGGCCCACAGGCTTCTGCCCCAGGAGGCCCACGGCTGCTTGCCGTGAGAGGGCCCGGGGGCTGCAACTACTGCCGGCGGATCGCTGAGCTGCCAGCCGCTGTGGTGGGGCAGGCTCCTAGGCCAGCGCAGTGGCGGGGTTCGAGGACCGCGGCAGAGGCTGTGACCTGCTCCACAGGGGCCGCGATCCCACTCAGGGCCTCTTGCAAACGGCAgacaagcatttatttatttttattttgttatttatttatttttcaattgagacagtgtctcactctgccacccaggctggagtataagaGCGAGAtcaaaactcactgcagcctcaacctcctgggttcaagtgatccttccacctcagcctcccaaatggctggcactaca i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18553131 1572 + 33263144 TAGTTGCTTTTCAAAAGCAAGTTTGGGGGGGCACAGCA---A-GGGAGGAACCACTAGAACGGTCATTGAACAGTCATGTGCTTCTCTCCAATCAGGAAACTTCAGCAGCTGCAGAGAACATCCAGAATCAGAAGCGAACACCTGAGTAAGGACCTTCTGGGCCATAAAGATGGTCCTTCGATGAGAAAGCCAGGGCCCCCAGACACTGCGTGTCCTGCATGGAATCACCAATTGGCCAATAGCAGGGCCTACGAGGAAGCCTAGGA-TTTCAAGGACGGCCCCGCACTACTCT-AAAAATGTTTCTACCACCAATACACGCTTGAATGGGCCCATGCCTGTAGGGAAGGCACTATCAACTCACACCAATTCCAAAGGAAGAAACCCAGGCTCAGGGGCTTCCCAGTGAAGACAGGTACAG------TCTCCTGAAAACCACGCCCCAGACTAGAGTGCATGGTCCTCCACTGGACAGACCCCGTGGCCCGTCCTCAGGATCCCAGAACAGGCTGCTCAGTGACATGCACTAAAGGGGGCAGGGACGGGCACTGGGAGATCCTGCCTGTGCAGAAAAAGTCCTCCCAGGAAGCAAACCACATTTCCAATCTGGTGAATCACGCTCAGT-AGAATAAAATCCAGGCCAATCAGCTATGCCTTCAACTCAAAAGGAATCTGAAGAATACATAAGTTAGTTACACATTGTCACGAAAGCAGTTAGGGAGAGCTTCTGAGATGATGAAAACCAAGGGAAAGGGGATGGAGATGAACAAAAATGATCTCATTAAGCCAGAGGCAGGCGAAGCCACA-CACTTCTGGAAAAGTGTAACAATAAGGCAGGAACTCAGGTTCCCAGGGAGAGGGACATGGGCTAAGGGTGACTTGGTGCCCGCAGGCAAATTGCTTAACCTCCCTGCCCTCCTGGCACCTCATGCCCGACACAGCCTCTGGTATTGGGAGTGGTGCGGTATCAGAGGGCTGCTCTCCTTCAGGCCAGCC-TTGCTGTCCACACCAGGAGGCAGG--------TACACAGTCACTTAGGTAGAAGACTTTCTAAGGCTTCCACTGCCCAAGGGCTGCAAGGGCATCCTTCAACGAAGACAGACGCTTGGTGGACACTATCCCCATTCTTCTTCAATCTCATTCCCCTTGTGGTTTCGGATGCCGCGGACCAAGTCCTGCAGGTTCTTGTCAAACATGCAGTTGATGATGACCTTCACCATCTTGAGGGCCACGGTGGT------------------------GGCCCACGGCTGCTTGCCGTGAGAGGGCCCGGGGGCTGCAACTACTGCCGGTGGATCACTGAGCTGCCGGCCGCTGTGGTGGGGCAGGCTCCTAGGCCAGCGCAGTGGCGGGGTTCGAGGACCGCGGCAGAGGCTGCGACCTGCTCCACAGGGGCCGCGATCCCACTCAG--------------GGCAGACAAGCATTTATTTAtttttattttgttatttatttatttttcaattgagacagtgtctcactctgccacccaggctggagtataatagcgagatcaaaactcactgcagcctcaacctcctgggttcaagtgatccttccacctcagcctcccaaatggctggcactaca i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198255269 1539 + 210400635 TAGCTGCTTTTTAAAAATGAGTTTGGTGGGGCGCT------G-GGAGGGGACCACTAGAACTGTCATTGAAAATTCATTTGCTGCTCTCCAATCAGGAGACTAGAGCAGCTGCAAAGAACACCTGGAATCAGAAGTGAACACCTGAGTAACGACCCTCCAGGACATAAAGATGGTCTTCTGATGAGAAAGTCAGGGACCCCAGACACTGCGTGTCCTACATGGAATGGCGGACTGGCCAATGGCAGGGCCCATGAGGAAGCCTGGGACTTTCAAGGATGGCCCCGGGGTATTCTAAAAAACATTTCCATCACCAATACCCACTTGAATGGGCCCATGACTGTAAGGAAGGCACTATCAACTCACACCAATTCCAAAGGAAAAAACCCAGGCTCAGAGGCTTCCCAGTGAAGACAGGCACACCCCCCACCCCCCGAAAAC-----CCCAGATTAGAGTGCATGGTCCTCCACCGGACAGACCCTGTGGTGGGTCCTCAGGATCCCAAAACAGGCTGCTCAGTGACAGGCACTGAAGGGGGCAGGGACAGGTGCTGGGAGATCCTGCCTGTGCAGAAAAAGTCCTCTCAGGAA-CAAATCACATTCCCGATCTGGTGAACCATACTCAGTAAAAACAAAATCCAGGCCAAACAGCAATGCCTTCAACTCAAAAGGAATCTGAAGAGTACAAAAGTTAGTTCAACATTGTAACCAAAGCAGTTAGGGAGAGCTTCTGAGATGATGAAAACCAAGGGGAAAGGGATGGAGATGAACAAAAATTACCTCATTAAGCCAGAGGCAGGCACAGCCACACCACTTCTAGAAAAGTGTAAAAATAAGGCAACAACTCAGGTTCCTAGGGAGAGGGACAGGAGTTGAGGGTGACTTGGTACCTGCAAGCAAATTCCTTAACTTCCCTGCCATCCTGGCACCTCATGCCCAATACAACCTCTGGTATTGGGACCAGTGTGGTGTCAGATGGCTGCTCTCCTTCAGGCCAGCC-TTGCTGTCCATGCAGGGATACAGG--------CAGGCAGTTGCTCATGTAGGAGACTTTCTAAGGATTCCACTGCCAAAGAGCTGCACCTCTGTCTTT------AGACAGACGCTTGGTGGCCACTATCTCCATTCTTCTTCAGTCTCATCTTCCTTGTGGTTGCGGATGCTGCGGACCAAGTCCTGCGGGTTCTTGTCAAACATGTGGTAGATGATGCCCTTCACTATCTTGAGGG--------------------------------------------------------------CCGGGGGCCTCGCCCACTGCCCGCAGATCGCTGTGCTGCCGGCCGCTGTGGTGAGGCAGGCTCCCAGGCCAGGGCGGCAGAGGAATCTGAGGACCCTGGCAGAGGCGGTGACCCGCTCAGCAGGGGCCACAATCCTACTCCGGGCCTCTTGCAAATGGTGGACATGCATTTAtttatttttattt--ttattt--ttttttaaaaattgagatagtaccttactctgtcacccgggctggagtttaatagtgagatcatagctcattacagcctcaacctcttgggttcaagtgatcctcccacctcagccttccaaatagctaggactaca i calJac3.chr1 I 302 C 0 e mm10.chr15 77117610 238 + 104043685 I e canFam3.chr10 40878248 2 - 69331447 I a score=127829.000000 s hg38.chr22_KI270876v1_alt 106137 44 + 263666 ggtacgcaccatcacacccggctGAA----TATGCATTTTTAATCATG s panTro4.chr22 34484111 44 + 49737984 ggtacgcaccatcacacccggctGAA----TACGCATTTTTAATCATG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30900143 44 + 46535552 ggtacgcaccatcacgcccagctGAA----TATGCATTTTTAATCATG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100452754 44 - 115148730 ggtacgcaccatcacgcctggctGAA----TATGCATTTTTAATCATG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80601009 44 + 95678458 ggtacacaccatcacacccggctTAA----TATTCATTTTTAATCATG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81027845 44 - 96509753 ggtacacaccatcacacccggctTAA----TATTCATTTTTAATCATG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76285469 44 + 90941950 ggtacacaccatcacgcccggcttaa----tattcatttttaatcatG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18554703 44 + 33263144 ggtacacaccatcacgcccggctTAA----TATTCATTTTTAATCATG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198256808 47 + 210400635 ggtacacactatca-gcctagcTTAATATGTATGCATTTTTAATCATG i calJac3.chr1 C 0 C 0 s mm10.chr15 77117848 43 + 104043685 GGTATGAACCATCTCGCCGGCCTCAGGGAGTAAACAGTTTTAA----- i mm10.chr15 I 238 C 0 e canFam3.chr10 40878248 2 - 69331447 I a score=815433.000000 s hg38.chr22_KI270876v1_alt 106181 224 + 263666 AATCTCTTTTGCAACATCCCA-GCATGCATTT-ATCTAATTATTTTTTTCACTAAATCCTCAAAAAA----GTTATGTTGAGAA--A-ATTTTTGATAAGTATCTAACAGGTGTGACAC-------ATTCTAGGCATGCA---ATTTTGAAGTATTCATCTGGCAATCGAAGAGCCTTGTGTTTTTAC------TATTCCCTATGAAGTGCATGCCAAACCCGATGGCTTGCTGAGCTGATTAAACCAA s panTro4.chr22 34484155 225 + 49737984 AATCTCTTTTGCAACATCCCAGGCATGCATTT-ATCTAATTATTTTTTTCACTAAATCCTCAAAAAA----GTTATGTTGAGAA--A-ATTTTTGATAAGTATCTAACAGGTGTGACAC-------ATTCTAGGCGTGCA---ATTTTGAAGTATTCATCTGGCAATCGAAGAGCCTTGTGTTTTTAC------TATTCCCTATGAAGTGCATGCCAAACCCGATGGCTTGCTGAGCTGATTAAACCAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30900187 225 + 46535552 AATCTCTTTTGCAACATCCCAGGCATGCATTT-ATCTAATTATTTTTTTCACTAAATCCTCAAAAAA----GTTATGTTGAGAA--A-ATTTTTGATAAGTATCTAACAGGTGTGACAC-------ATTCTAGGCGTGCA---ATTTTGAAGTATTCATCTGGCAACTGAAGAGTCTTGTGTTTTTAC------TATTCCCTATGAAGTGCATGCCAAACCGGATGGCTTGCTGAGCTGATTAAACCAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100452798 224 - 115148730 ACTCTCTTTTGCAACATCCCAGGCATGCATTT-ATCTAATTA-TTTTTTCACTAAATCCTCAAAAAA----GTTACGTTGACAA--A-ATTTTTGATAAGTATCTAACAGGTGTGACAC-------ATTCTAGGCATGCA---ATTTTGAAGTATTCATCTGGCAATTGAAGAGCCTTGTGTTTTTAC------TATTCCCTATGAAGTGCATGCCAAACCGGATGGCTTGCTGAGCTGATTAAACCAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80601053 223 + 95678458 AATCTCTTTTGCAACATCCCAGGCATGCATTT-ATCTAATTG--TTTTTCACTAAATCCTCAAAAAA----GTTATGTTAAGAA--A-ATTTTTGATAAATATCTAACAGGTGTGACAC-------ATTCTAGGCATGCA---ATTTTGATGTATTCATCTGGCAATTGAAGAGCCTTGTGTTTTTAC------TATTTCCTATGAAGTCCATGCAAAACCGGATGGCTTGCTGAGCTGATTAAACCAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81027889 223 - 96509753 AATCTCTTTTGCAACATCCCAGGCATGCATTT-ATCTAATTG--TTTTTCACTAAATCCTCAAAAAA----GTTATGTTAAGAA--A-ATTTTTGATAAATATCTAACAGGTGTGACAC-------ATTCTAGGCATGCA---ATTTTGATGTATTCATCTGGCAATTGAAGAGCCTTGTGTTTTTAC------TATTTCCTATGAAGTCCATGCAAAACCGGATGGCTTGCTGAGCTGATTAAACCAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76285513 223 + 90941950 AATCTCTTTTGCAACATCCCAGGCATGCATTT-ATCTAATTG--TTTTTCACTAAATCCCCAAAAAA----GTTATGTTAagaa--a-atttttgataaatatctaACAGGTGTGACAC-------ATTCTAGGCATGCA---ATTTTGATGTATTCATCTGGCAATTGAAGAGCCTTGTGTTTTTAC------TATTCCCTATGAAGTCCATGCAAAACCGGATGGCTTGCTGAGCTGATTAAACcaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18554747 223 + 33263144 AATCTCTTTTGCAACATCCCAGGCATGCATTT-ATCTAATTG--TTTTTCACTAAATCCTCAAAAAA----GTTATGTTAAGAA--A-ATTTTTGATAAATATCTAACAGGTGTGACAC-------ATTCTAGGCATGCA---ATTTTGATGTATTCATCTGGCAATTGAAGAGCCTTGTGTTTTTAC------TATTCCCTATGAAGTCCATGCAAAACCGTATGGCTTGCTGAGCTGATTAAACCAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198256855 221 + 210400635 TATCTCTTTTGCAACAT-CCAGGCATGCATTT-GTCTAACTT--TTTTCCACTAAGTCCTCAAGAAA----GTTATGTTGAGAA--A-ATTTTTGATAAATATCTCACAGGTGTGACAC-------ATTCTAGGCATGCG---A-TTTGAAGTATTAATCTGGCAATTGAAGAACCTTGTGTTTTTAC------TATTCCCTATGAAGTGCATGCCAAACCGGATGGCTTGCTGAGATGATTAAATCAA i calJac3.chr1 C 0 C 0 s mm10.chr15 77117891 201 + 104043685 ---------TGAAACATACCAGATACACATCTGATCTAATTT-TTCCCACACAAAGTTCTCTAAGTT----CCTAAGTTGATAAACA-GTATTTGATAGGCATTT----------ACAT-------TTTATAGACATACT---C-CTTGTAGTCCTCATTTGGTAATT---TAGCCTTATATTTTTAT------CATTTCATATACAGTGCATGCCAACCCTGACAATT---TGAGCTGATTAAAACAT i mm10.chr15 C 0 C 0 s canFam3.chr10 40878250 238 - 69331447 AATCTCTTTTGCAACACTGCAGGCGT-------TTCCACACA--CCTCCCCCTAAATCCTCAAAAAAAGCTGCCATGTTGAGAA--ATACTTTTGACAAACATCTAACAGGTGTGATACAATAGGTATTCCAAACACATATTTATTTTGAAATATTCATCTGGCAATTTAGGAACCCTATGTTTTCACCCTATGTATTGCCTACAAAGTGCATGCCAAACTGGAGGGCTCACTGAGCTGATTAAACCAA i canFam3.chr10 I 2 I 138 a score=1381750.000000 s hg38.chr22_KI270876v1_alt 106405 344 + 263666 CAT-----------ACTTTTAAAA-----------------CAGGAGTGGAACTTGCTGTTCTTATTCTCTCAAATGAGATAGAAGTGAGTCCCCAACAGATTCTTCTAGGTGA--CAGGATGCATCCCCTCCCTTTGACT-----TTCAGGCTAAAAGAAGCTGTGAATCAGAGATACTTCTGGCTCAGAGATGTTGGCAACCATCTTGAAATGAAGTTTGAAACTTTAAAATATAAAGGATAATCAGGAATAAACTCCAAATGAATAACAGCTTTTCAAGTGTCAATTTAAGTGATGGCAGCTTTTTATCTCATTCCATTCAGGCCTTGCAGATGGCTTAAATGTGCAATGATTCATGTGATATAAAAATAGCAGAA s panTro4.chr22 34484380 344 + 49737984 CAT-----------ACTTTTAAAA-----------------CAGGAGTGGAACTTGCTGTTCTTATTCTCTCAAATGAGATAGAAGTGAGTCCCCAACAGATTCTTCTAGGTGA--CAGGATGCATCCCCTCCCTTTGACT-----TTCAGGCTAAAAGAAGCTGTGAATCAGAGATACTTCTGGCTCAGAGATGTTGGCAACCATCTTGAAATGAAGTTTGAAACTTTAAAATATAAAGGATAATCAGGAATAAACTCCAAATGAATACCAGCTTTTCAAGTGTCAATTTAAGTGATGGCAGCTTTTTATCTCATTCCATTCAGGCCTTGCAGATGGCTTAAATGTGCAATGATTCATGTGATATAAAAATAGCAGAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30900412 344 + 46535552 CAT-----------ACTTTTAAAA-----------------CAAGAGTGGAACTTGCTGTTCCTATTCTCTCAAATGAGACAGAAGTGAGTCCCCAACAGATTCTTCTAGGTGA--CAGGATGAATCCCCTCCCTTTGACT-----TTCAGGCTAAAAGAAGCTGTGAATCAGAGATACTTCTGGCTCAGAGATGTTGGCAACCATCTTGAAATGAAGTTTGAAACTTTAAAATGTAAAGGATAATCAGGAATAAACTCCAAATGAATACCAGCTTTTCAAGTGTCAATTTAAGTGATGGCAGCTTTTTATCTCATTCCATTCAGGCCTTGCAGATGGCTTAAATGTGCAATGATTCATGTGATATAAAAATAGCAGAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100453022 344 - 115148730 CAT-----------ACTTTTAAAA-----------------CAGGAGTGGAACTTGCTGTTCTTATTCTCTCAAACGAGACAGAAGTGAGTCCCCAACAGATTCTTCTAGGTGA--CAGGATGAATCCCCTCCCTTTGACT-----TTCAGGCTGAAAGAAGCTGTGAATCAGAGATACTTCTGGCTCAGAGATGTTGGCAACCATCTTGAAATGAAGTTTGAAACTTTAAAATATAAAGGATAATCAGGAATAAACTCCAAATGAATACCAGCTTTTCAAGTGTCAATTTAAGTGATGGCAGCTTTTTATCTCATTCCATTCAGGCCTTGCAGATGGCTTAAATGTGCAATGATTCATGTGATATAAAAATAGCAGAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80601276 343 + 95678458 TAT-----------ACTTTTAAAA-----------------CAGGAGTGGAACTTGCTGTTCTTATTATCTCAAATGAGACAGAAGTGAGTCCCCAACAGATTCTGCTAGGTGA--CAGGATGAATCCCCTCCCTTTGACT-----TTCAGGCTAAAAGAAGCTGTGAATCAGAGATACTTTTGGCTCAGAGATGTTGGCAACCATCTTGAAATGAAGTTTGAAACTTCAAAATATAAAGGATAATCAGGAATAAACTCCAAATGAATATCAGCTTTTCAAGTGTCAATTTAAGTGATGGCAGCTTTTTATCTCATTCCATTCAGGCCTTGCAGATGGCTT-AATGTGCAATGATTCATGTGATATAAAAATAGCAGAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81028112 343 - 96509753 TAT-----------ACTTTTAAAA-----------------CAGGAGTGGAACTTGCTGTTCTTATTATCTCAAATGAGACAGAAGTGAGTCCCCAACAGATTCTGCTAGGTGA--CAGGATGAATCCCCTCCCTTTGACT-----TTCAGGCTAAAAGAAGCTGTGAATCAGAGATACTTTTGGCTCAGAGATGTTGGCAACCATCTTGAAATGAAGTTTGAAACTTCAAAATATAAAGGATAATCAGGAATAAACTCCAAATGAATATCAGCTTTTCAAGTGTCAATTTAAGTGATGGCAGCTTTTTATCTCATTCCATTCAGGCCTTGCAGATGGCTT-AATGTGCAATGATTCATGTGATATAAAAATAGCAGAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76285736 343 + 90941950 cat-----------acttttaaaa-----------------cagGAGTGGAACTTGCTGTTCTTATTATCTCAAATGAGACAGAAGTGAGTCCCCAACAGATTCTGCTAGGTGA--CAGGATGAATCCCCTCCCTTTGACT-----TTCAGGCTAAAAGAAGCTGTGAATCAGAGATACTTTTGGCTCAGAGATGTTGGCAACCATCTTGAAATGAAGTTTGAAACTTCAAAATATAAAGGATAATCAGGAATAAACTCCAAATGAATATCAGCTTTTCAAGTGTCAATTTAAGTGATGGCAGCTTTTTATCTCATTCCATTCAGGCCTTGCAGATGGCTT-AATGTGCAATGATTCATGTGATATAAAAATAGCAGaa i papAnu2.chr10 C 0 I 3568 s chlSab2.chr19 18554970 342 + 33263144 CAT-----------ACTTTTAACA-----------------CAGGAGTTGAACTTGCTGTTCTTATTCTCTCAAATGAGAAAGAAGTGAGTCCCCAACAGATTCTGCTAGGTGA--CAGGATGAATCCCCT-CCTTTGACT-----TTCAGGCTAAAAGAAGCTGTGAATCAGAGATACTTTTGGCTCAGAGATGTTGGCAACCATCTTGAAATGAAGTTTGAAACTTTAAAATATAAAGGATAATCAGGAATAAACTCCAAATGAATACCAGCTTTTCAAGTGTCAATTTAAGTGATGGCAGCTTTTTATCTCATTCCATTCAGGCCTTGCAGATGGCTT-AATGTGCAATGATTCATGTGATATAAAAATAGCAGAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198257076 342 + 210400635 CAT-----------ACTTTTAAAA-----------------CAGGAGTGGAACTTACTGTTCTTATTCTCTCAAATGAGACAGAAGTGAGTCCCCAACAGATTCTTCTAGCTGA--CAGGATGAATCCCCTCCCTTTGACT-----TTCAGGCTAAAAGAAGCTGTGAATCAGAGATACTTTTGGCTCAGAGATGTTAGCAACCATCTTGAAATGAAGTTTGAAACTTTAAAATATAAAGGATAATCAGGAATAAACTCCAAATGAATACCAGCTTTTCAA--GTCAATTTAAGTGATGGCAGCTTTTTATCTCATTCCATTCAGGCCTTGCAGATGGCTTAAATGTGCAATGATTCACGTGATATAAAAATAGCAGAA i calJac3.chr1 C 0 C 0 s mm10.chr15 77118092 309 + 104043685 CAT-----------GCTCTTA---------------------AGGACTG--ATCAGCTGCTCTTGTTGTCTGACTTGAGACAGGC-TGAGTGT---AGTGATTTTTCTGGGC--------ACAAACTCTTGGCTTGTG--------TTTAAGCTGA---AAACCCTAAATCAGAGGTGCTTTTTGGGTTCATATGTTAGCAGCCACCTTGAAATGAAGGCAATGACTT--AAATATAAAGGATAATCAAGAATTAACTTAGAATGAACATTTGCTTTTTAACTATTAATCTAAA-GATGGCAGCTTTGTACTTCATTTCATATGGGCCTTGCGGGTGCCTTAAATGTGCAATGGCTTATATGATGTAAA---------- i mm10.chr15 C 0 C 0 s canFam3.chr10 40878626 372 - 69331447 catgaataaataaaatctttaaaaaaTAATAAAAAATAAACCAAGAGTGGAACTCACTGTTCTTAGCATCTCAAGTGAGTTACAACTGAGTTCCTAACAGATTCTTCTGAGTGACGCAGAACAGATCCCCTCCCTTTGACCCAATGTTCAAGTAAAAAA-----CTGAATCACAAATACTTTTGGCTCAGAGACATTACCAACCATCTCGAAATGAAGTTCGAGACTTTAAAGTATAAAGGACAATCAGGAATAAACTCGGAATGAATGCTAGC-TTTCAAGTGTCAATCTAAGTGATGGCAGCTTT-TATCTCACTCCATTCAGGCCTTGCAGATGGCTTAAATGTGCAATGATTCATATGATATAAAAATAGCAGAA i canFam3.chr10 I 138 C 0 a score=1726993.000000 s hg38.chr22_KI270876v1_alt 106749 559 + 263666 AAGGGAAGAGCTATGAAGCAATGTTCTGTGAAAGTGTACGGTTTTCAATTATCAGTCTTGGCACAATGCAGACTAAGTAACACAAATCCCATTTAAAGATGAAACTCACTAAGTTACTAAAACAGCATCAAGCAAACCAACACGCAGTCAAAGCAAC------AAGCATCAATTACAACTAATGCTCATTCAAGCACCTTCAAACTTGCCTCTTAACATCTCACAGTTGGATCACATGAAACTTTATCTTCAATCAAACTTTAAAACCACCAGATCTGGTCTGCAAGATGACAATGTATCACTCTGAGGAAAGTTAAAAAGACTGATTCCACAAACTCCAAATTACACTTTTACATATAACTT-TATATGTAGCCCATGTAATCTGTCACAGTGTATGTGAAGTGGCAGGATAAATGAAAACTAATGATTACTTCAAAGTATGTTGCCCAAGGTGCTTATCTGTAGCTCTTCATAGTTCTTTGCTTCTCTGAAGACACAATTTAAGATCAGAAGCAAGACTG----GTTAATTTTGCAGCTTGTAGTG-AACACCCGTCCC-CCTTGTTTTT s panTro4.chr22 34484724 559 + 49737984 AAGAGAAGAGCTATGAAGCAATGTTCTGTGAAAGTGTACGGTTTTCAATCATCAGTCTTGGCACAATGCAGACTAAATAACACAAATCCCATTTAAAGATGAAACTCAATAAGTTACTAAAACAGCATCAAGCAAACCAACATGCAGTCAAAGCAAC------AAGCATCAATTACAACTAATGCTCATTCAAGCACCTTCAAACTTGCCTCTTAACATCTCACAGTTGGATCACATAAAACTTTATCTTCAATCAAACTTTAAAACCACCAGATCTGGTCTGCAAGATGACAGTGTATCACTCTGAGGAAAGTTAAAAAGACTGATTCCACAAACTCCAAATTACACTTTTATATATAACTT-TATATGTAGCCCATGTAATCTGTCACAGTGTATGTGAAGTGGCAGGATAAATGAAAACTAATGATTACTTCAAAGTATGTTGCCCAAGGTGCTTATCTGTAGCTCTTCATAGTTCTTTGCTTCTCTGAAGACACAATTTAAGATCAGAAGCAAGACTG----GTTAATTTTGCAGCTTGTAGTG-AACACCCGTCCC-CCTTGTTTTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30900756 559 + 46535552 AAGGGAAGAGCTACGAAGCAATGTTCTGTGAAAGTGTACGGTTTTCAATCATCAGTCTTGGCACAGTGCAGACTAAATAACACAAATCCCATTTAAAGATGAAACTCACTAAGTTACTAAAACAGCATCAAGCAAACCAACATGCAGTCAAAGCAAC------AAGCATCAATTACAACTAATGCTCATTCAAGCACCTTCAAACTTGCCTCTTAACATCTCACAGTTGGATCACATAAAACTTTATCTTCAATCAAACTTTAAAACCATCAGATCTGGTCTGCAAGATGACAATGTATCACTCTGAGGAAAGTTAAAAACACTGATTCCATAAACTCCAAATTACACTTTTATATATAACTT-TATATGTAGCCCATGTAATCTGTCACAGTGTATGTGAAGTGGCAGGATAAATGAAAACTAATGATTATTTCAAAGTATGCTGCCCAAGGTGCTTATCTGTAGCTCTTGATAGTTCTTTGCTTCTCTGCAGACACAATTTAAGATCAGAAGCAAGACTG----GTTAATTTTGCAGCTTGTAGTG-AACACCCGTCCC-CCTTGTTTTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100453366 559 - 115148730 AAGGGAAGAGCTACCAAGCAACGTTCTGTGAAAGTGTACGGTTTTCAATCATCAGTCTTGGCACAATGCAGACTAAATAACACAAATCCCATTTAAAGATGAAACTCACTAAGTTACTAAaacagcatcaagcaaaccaacatgcagtcaaagcaac------aagcatcaaTTACAACTAATGCTCATTCAAGCACCTTCAAACTTGCCTCTTAACATCTCACAGTTGGATCACATAAAACTTTATCTTCAATCAAACTTTTAAACCACCAGATCTGGTCTGCAAGATGAGAATGTATCACTCTGAGGAAAGTTAAAAAGACTGATTCCACAAACTCCAAATTACACTTTTATATATAACTT-TATATGTAGCCCATGTAATCTGTCACAGTGTATGTGAAGTGGCAGGATAAATGAAAACTAATGATTACTTCAAAGTATGCTGCCCAAGGTGCTTATCTGTAGCTCTTGATAGTTCTTTGCTTCTCTGAAGATGCAATTTAAGATGAGAAGCACGACTG----GTTAATTTTGCAGCTTATAGTG-AACACCCGTCCC-CCTAGTTTTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80601619 560 + 95678458 AAGGGAAGAGCTACGAAGCAATGTTCTGTGAAAGTGTATGGTTTTCAATCATCAGTCTTGGCACAATGCAGACTAAATAACATAAATTCCATTTAAAGATGAAACTCACTAAGTTACTAAAACAGCATCAAGCAAACCAACATGCAGTCAAAGCAAC------AAGCATCAATTACAACTAATGCTCATTCAAGCATCTTCAAACTTGCCTCTTAACATCTCACAGTTGGATCACATAAAACTTTGTCTTCAACCAAACTTTACAACCACCAGATCTGGTCTGCAAGATGACAATGTATCACTCTGAGGAAAGTTAAAAAGACTGATTCCACAAACTCCAAATTACACTTTTATATATAACTT-TATATGTAGTCCATGTAATCTGTCATGATGTATGTGAAGTGGCAGGATAAATGAAAACTAATGATTACTTCAAAGTATGCTGCCCAAGGTGCTTATCTATAGCTCTTGATAGTTCTTTGCTTCTCTGAAGACACAATTTAAGATCAGAAGCAAGACTG----GTTAATTTTGCAGCTTGTAGTG-AACACCCCCTGCTTTTTTTTTTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81028455 560 - 96509753 AAGGGAAGAGCTACGAAGCAATGTTCTGTGAAAGTGTATGGTTTTCAATCATCAGTCTTGGCACAATGCAGACTAAATAACATAAATTCCATTTAAAGATGAAACTCACTAAGTTACTAAaacagcatcaagcaaaccaacatgcagtcaaagcaac------aagcatcaaTTACAACTAATGCTCATTCAAGCATCTTCAAACTTGCCTCTTAACATCTCACAGTTGGATCACATAAAACTTTGTCTTCAACCAAACTTTACAACCACCAGATCTGGTCTGCAAGATGACAATGTATCACTCTGAGGAAAGTTAAAAAGACTGATTCCACAAACTCCAAATTACACTTTTATATATAACTT-TATATGTAGTCCATGTAATCTGTCATGATGTATGTGAAGTGGCAGGATAAATGAAAACTAATGATTACTTCAAAGTATGCTGCCCAAGGTGCTTATCTATAGCTCTTGATAGTTCTTTGCTTCTCTGAAGACACAATTTAAGATCAGAAGCAAGACTG----GTTAATTTTGCAGCTTGTAGTG-AACACCCCCTGCTTTTTTTTTTT i macFas5.chr10 C 0 C 0 s chlSab2.chr19 18555312 560 + 33263144 AAGGGAAGAGCTACGAAGCAATGTTCTGTGAAAGTGTACGGTTTTCAATCATCAGTCTTGGCACAATGCAGACTAAATAACATAAATTCCATTTAAAGATGAAACTCACTAAGTTACTAAAACagcatcaagcaaaccaacatgcagtcaaagcaac------aagcatcaaTTACAACTAATGCTCATTCAAGCATCTTCAAACTTGCCTCTTAACATCTCACAGTTGGATCACATAAAACTTTGTCTTCAACCAAACTTTACAACCACCAGATCTGGTCTGCAAGATGACAATGTATTACTCTGAGGAAAGTTAAAAAGACTGATTCCACAAACTCCAAATTACACTTTTATATATAACTT-TATATGTAGTCCATGTAATCTGTCATAATGTATGTCAAGTGGCAGGATAAATGAAAACTAATGATTACTTCAAAGTATGCTGCCCAAGGTGCTTATCTGTAGCTCTTGATAGTTCTTTGCTTCTCTGAAGACACAATTTAAGATCAGAAGCAAGACTG----GTTAATTTTGCAGCTTGTAGTGTAACACTCTCTGC-TTTTTTTTTT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198257418 551 + 210400635 AAGGGAAGAGCTATGAAGCAATGTTCTGTGAAACAGTAAGGTTTTCAATCATCGATCTTGGCACAATGCAGACTAAACAAAACAAATTCAATTTAAAGATGAAACTCACTAAGTTACTAAAACAGCATCAAGCAAACCAACATGCAGTCAAAGCAAC------AAGCATCAATTACAACTAACTCTCATTCAAGTACCTTCAGACTTGCCTCTT-ACATCTCACAGTGGGATCACATAAAACTTTATCTTCAATCAAACTTTAAAACCACCAGA-----TCTGCAAGATGACAATGTATCACTCTGAGGAAAGTTAAAAAGACCGATTCCACATACTCCAAATTACACCTTTATATATAACTT-TATATGCAGCCCATGTTACCTGTCATAGTGTATGTGAAGTGGCAAGATAAATGAAAACCAATGATTACTTCAAAGTATGCTGCCTCAAGTGTTTATCTGTCGCTCTTGATAGTTCTTTGCTTCTCTGAAGACACAATTTAAGATCAGAGGCAAGACTG----GTTAATTTTGCAGCGTGTAGTG-AACACCCCCCAC-CTT--TTTTT i calJac3.chr1 C 0 C 0 s mm10.chr15 77118401 515 + 104043685 AAGGGATGGGCTATTAAGCCATGCTTTGCAAAAGTGTAAGGTTTTCAGCTGCCAATGGGAGCACAAGGCAGACTA---AAAACAAACTCCATGGAAAGGCG------------------AAACAGCACCATGGGTACCAGCACACAGTCAAAGCAAG------AAGCATCAACTGTAACTAAAGCGGATTGAAGCACCTTC-TATTTGCCTCTT-CCATCTCACAACTGGATCATATAAACCTCT--------TCAAACTTTAAAAGCACCAGATTTAATCTTCAGAAAGCCAATGTGCCACAC-----AAAATT-AAAAGATTGGTTCTACAAGCTCTAAGC--CAGTTTTACATATGACTTACATGTGCCACCCATGTAACCAGTCATGGTGCACAC-ACATGGCAGGGTAAATAGGGAGGAATGGTTATGTCAGAGGATGCTGATGGAGGCTTGTAACTGTTGTTCTTGAGGGCTCTCTTCTGTCTTAATGACTAAACGTTAGA--AGGTTTTAAACTGCAGTGCTGATTCTACAGTCTGCAGTG-AACACTTATTAG-CTC------- i mm10.chr15 C 0 C 0 s canFam3.chr10 40878998 546 - 69331447 AAGGGAAGAGCTATGAAGCAATGTTCAGTGAAAGTGTAAGGTTTTCAATCATCAATCTGGGCACAATGCAGACCAAACAAAGCAAATTCTATTCAAAGATGAAACTCACTAAGTTACTAAAATGGCATCATGGACACCA--AAGCAAT--AAGCAACAAGCGTAAGCATCAATTACAACTAATGCTCACTCAAGCACCTTCAAACTTGCCTCTT-GTATCTCACAGCTGGAGCCCATAAAACTATTTCTTCAACCAAACCTTA-AGTGACTAGATCTGATCTGCAGGGTATCAGTACATCACTCTGATAAAAGTTATAAAGGTTGACTCTA---GTTCCAAACCATAGTTTTATAGATAACTT--ATACATAGTTCATGTAATCTGTAATACTATA-ATGAGGTGGCAGGATAAATGAAAACTGATGATTATTTCAAAGTATGTTGCCCAA----CATACTTGTTACTCC----AAGTTTCTAAGGCTCTGAAGACACAATTTAAGGATAGAAGCCAGACTG----GATAATTTTCTGCCTTGTAGTG-AATACTTACttt-tttttttttt i canFam3.chr10 C 0 I 127 e papAnu2.chr10 76286079 3568 + 90941950 I a score=297214.000000 s hg38.chr22_KI270876v1_alt 107308 109 + 263666 AAGTATGAAATCTTTAATTCTAAGTCGATCTGCCATGTAGAAAAAA-GTGACC---TATCATTTCCTAAATTCTCAAGACTTCTGATCTAATGCAAttttta-aattgaagttt s panTro4.chr22 34485283 108 + 49737984 AAGTATGAAATCTTTAATTCTAAGTCGATCTGGCATGTAG-AAAAA-GTGACC---TATCATTTCCCAAATTCTCAAGACTTCTGATCTAATGCAAttttta-aactgaagttt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30901315 108 + 46535552 AAGTATGAAATCTTTAATTCTAAGTCAATCTGGCATGTAG-AAAAA-GTGACC---TATCATTTCCCAAATTCTCAAGACTTCCAATCTAATGCaactttta-aactgaagttt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100453925 108 - 115148730 AAGTATGAAATCTTTAATTCTAAGTCAATCTGGCATGTAG-AAAAA-GTGACC---TATCATTTCCCAAATTCTCAAGACTTTTGATCTAATGCAAttttta-aactgaagttt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80602179 108 + 95678458 AAGTATGAAATCTTTAATTCTAAGTCGATCTAGCATGTAG-AAAAA-GTGACT---TATCATTTACCAAATTCTCAAGACTTCTGATCTACTGCAAttttta-aactgaagttt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81029015 108 - 96509753 AAGTATGAAATCTTTAATTCTAAGTCGATCTAGCATGTAG-AAAAA-GTGACT---TATCATTTACCAAATTCTCAAGACTTCTGATCTACTGCAAttttta-aactgaagttt i macFas5.chr10 C 0 C 0 s chlSab2.chr19 18555872 108 + 33263144 AAGTATGAAATCTTTAATTCTAAGTCGATCTAGCATGTAG-AAAAA-GTGACT---TATCATTTACCAAATTCTCAAGACTTCTGATCTACTGTAAttttta-aactgaagttt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198257969 111 + 210400635 AAGTATGAAATCTGTAATTCTATGTTGATCTGACATGTAG-AAAAA-GTGACCTATTATTATTTCCCAAATTTTCAAGACTTCTCATCTAATGCAAttttta-aactgaagttt i calJac3.chr1 C 0 C 0 s mm10.chr15 77118916 64 + 104043685 -------------------------------------TAG-AAAAATGTGACA----GCCATTTCCAGAATTTTTAAGTCTTCTAAGGTAA-------TTTA-AAATGGAGATT i mm10.chr15 C 0 I 3626 s canFam3.chr10 40879671 109 - 69331447 GAGTATGAAGTCTTTAATTCTAGGGACACTTGGCAAATTG-AAAAA-GTAAAT---TATCATTTCCAAAATTCTCAAGTCTTCTGATTTAATATATATTTTACAACTGCAGTTG i canFam3.chr10 I 127 C 0 e papAnu2.chr10 76286079 3568 + 90941950 I a score=460673.000000 s hg38.chr22_KI270876v1_alt 107417 177 + 263666 aacatacatagataaaaatacataaattataagcatagagctgaatattcacaatgaaacgtacacccatgtaaccaccaaattagatcaagaaacaagataccagaagcaccctggggggcccccaccagtcacggttcccctggcaaagggtcacgaggatcctgacttctaacT s panTro4.chr22 34485391 177 + 49737984 aacatacatcgataaaaatacataaattataagcatagagctgaatattcacaatgaaacgtacacccatgtaaccaccaaattagatcaagaaacaagataccagaagcaccctggggggcccacaccagtcacggttcccctggcaaagggtcacgaggatcctgacttctaacT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30901423 176 + 46535552 aacatacatagataaaaatacataaattataagcatagagctgaatattcacaatgaaa-gtacacccatgtaaccactaaattagatcaagaaacaagataccaggagcaccctggggggcccacaccagtcacggttcccctggcaaagggtcacgacgatcctgacttctaact i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100454033 176 - 115148730 aacatacatagataaaaatgcataaattataagcatagagctgaatattcacaatgaaa-gtacacccatgtaaccaccaaattagatcaagaaacaagataccaggagcaccctggggggcccacaccagtcatggttcccctggcaaagggtcatgacgatcctgacttctaact i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80602287 176 + 95678458 tacatacatagataaaaatccataaattacaagcacagagctgaatattcacaatgaaa-gtacacccatgtaaccaccaaattagatcaagaaacaagataccaggagcacctcaaggggcccactccagtcacggttcccctggcaaagggtcacgacgatcctgacttctaact i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81029123 176 - 96509753 tacatacatagataaaaatacataaattacaagcacagagctgaatattcacaatgaaa-gtacacccatgtaaccaccaaattagatcaagaaacaagataccaggagcacctcaaggggcccactccagtcacggttcccctggcaaagggtcacgacgatcctgacttctaact i macFas5.chr10 C 0 I 2065 s chlSab2.chr19 18555980 176 + 33263144 aacatacatagacaaaaatacataaattacaagcacagagctgaatattcacaatgaaa-gtacacccatgtaaccaccaaattagatcaagaaacaagataccaggagcaccttaaggggcccactccagtcacggttcccctggcaaagggtcacgacgatcctgacttctaact i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198258080 174 + 210400635 aacatgcatagataaaaatacataaattaaaagcacagagctgaacattcacaaagaaa-gtacacccatgtaaccatgaaattagatcaagaaactagattccaagagcaccct-aggggcccactccagtcactgttcccctggcaaa-ggtcatgataatcctgacttctaact i calJac3.chr1 C 0 C 0 s canFam3.chr10 40879780 156 - 69331447 ----AACATAGATACAAATGCCGAAATCGTAAGC--AGGAatggattttcgcagagaaa-atacacccttgtaaatatcaaattagatggagcaacagaactctaggagcaccct--------------agtcactgtctccttgtgaaagggtccccactatgctgacttctgact i canFam3.chr10 C 0 C 0 e mm10.chr15 77118980 3626 + 104043685 I e papAnu2.chr10 76286079 3568 + 90941950 I a score=7497.000000 s hg38.chr22_KI270876v1_alt 107594 2 + 263666 ct s panTro4.chr22 34485568 2 + 49737984 ct i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30901599 2 + 46535552 ct i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100454209 2 - 115148730 ct i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80602463 2 + 95678458 ct i rheMac3.chr10 C 0 I 2080 s macFas5.chr10 81031364 2 - 96509753 ct i macFas5.chr10 I 2065 I 2 s papAnu2.chr10 76289647 2 + 90941950 ct i papAnu2.chr10 I 3568 I 2 s chlSab2.chr19 18556156 2 + 33263144 ct i chlSab2.chr19 C 0 I 2089 s calJac3.chr1 198258254 2 + 210400635 ct i calJac3.chr1 C 0 I 2088 s canFam3.chr10 40879936 2 - 69331447 cc i canFam3.chr10 C 0 C 0 e mm10.chr15 77118980 3626 + 104043685 I a score=1911.000000 s hg38.chr22_KI270876v1_alt 107596 1 + 263666 a s panTro4.chr22 34485570 1 + 49737984 a i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30901601 1 + 46535552 a i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100454211 1 - 115148730 a i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81031368 1 - 96509753 a i macFas5.chr10 I 2 C 0 s papAnu2.chr10 76289651 1 + 90941950 a i papAnu2.chr10 I 2 C 0 s canFam3.chr10 40879938 1 - 69331447 a i canFam3.chr10 C 0 I 1036 e mm10.chr15 77118980 3626 + 104043685 I e calJac3.chr1 198258256 2088 + 210400635 I e rheMac3.chr10 80602465 2080 + 95678458 I e chlSab2.chr19 18556158 2089 + 33263144 I a score=807.000000 s hg38.chr22_KI270876v1_alt 107597 2 + 263666 gg s panTro4.chr22 34485571 2 + 49737984 gg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30901602 2 + 46535552 ga i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100454212 2 - 115148730 gg i nomLeu3.chr7b C 0 C 0 e mm10.chr15 77118980 3626 + 104043685 I e canFam3.chr10 40879939 1036 - 69331447 I e calJac3.chr1 198258256 2088 + 210400635 I e rheMac3.chr10 80602465 2080 + 95678458 I e papAnu2.chr10 76289652 0 + 90941950 C e macFas5.chr10 81031369 0 - 96509753 C e chlSab2.chr19 18556158 2089 + 33263144 I a score=112732.000000 s hg38.chr22_KI270876v1_alt 107599 45 + 263666 cctcccaaagtgctgggattacaggcgtgagccacagcgcctggc s panTro4.chr22 34485573 45 + 49737984 cctcccaaagtgctgggattacaggcgtgagccaccgcgcctggc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30901604 45 + 46535552 cctcccaaagtgctgggattacaggcgtgagccactgcgcctggc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100454214 45 - 115148730 cctcccaaagtgctgggattacaggcgtgagctaccgcgcctggc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80604545 45 + 95678458 cctcccaaagtgctgggattacaggcgtgagtcactgcgactggc i rheMac3.chr10 I 2080 C 0 s macFas5.chr10 81031369 45 - 96509753 cctcccaaagtgctgggattacaggcgtgagtcactgcgactggc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76289652 45 + 90941950 cctcccaaagtgctgggattacaggcgtgagtcactgcgacTGGC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18558247 45 + 33263144 cctcccaaagtgctgggattacaggcgtgagtcactgcgactggc i chlSab2.chr19 I 2089 C 0 e mm10.chr15 77118980 3626 + 104043685 I e canFam3.chr10 40879939 1036 - 69331447 I e calJac3.chr1 198258256 2088 + 210400635 I a score=8146.000000 s hg38.chr22_KI270876v1_alt 107644 4 + 263666 cTGG s panTro4.chr22 34485618 4 + 49737984 cTGG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30901649 4 + 46535552 cTGG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100454259 4 - 115148730 cTGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80604590 4 + 95678458 ctga i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81031414 4 - 96509753 ctga i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76289697 4 + 90941950 CTGA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18558292 4 + 33263144 ctga i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198260344 4 + 210400635 ccag i calJac3.chr1 I 2088 C 0 e mm10.chr15 77118980 3626 + 104043685 I e canFam3.chr10 40879939 1036 - 69331447 I a score=834513.000000 s hg38.chr22_KI270876v1_alt 107648 263 + 263666 AGTGCATGTTCTTAGCCA-----TTATATTgtactttacatatattattttctttaaccctcacaataactctgtgaaacaggtactaccattatctccaactgacagaggaagatgctaa------------gtgcagagatgttcagttagttgtccaaggtcacacagtaagcagcagactaggaattcaaaactaggcagcccaatttcaTATGTGAAATCACTTCCTTTCTAGCACTGTACCCATCCTCTCTTCTTCTCATTAGAAACGAGAACC s panTro4.chr22 34485622 263 + 49737984 AGTGCATGTTCTTagcca-----ttatattgtactttacatatattattttctttaaccctcacaataactctgtgaaacaggtactaccattatctccaactgacagaggacgacgctaa------------gtgcagagatgttcagttagttgtccaaggtcacacagtaagcagcagactaggaattcaaaactaggcagcccaatttcatatgtgaaatcacttcctttctagcaccacacccatcctctCTTCTTCTCATTAGAAGCGAGAACC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30901653 260 + 46535552 AGTGCATGTTCTTAGCCA-----TTATATTgtactttacatatattattttctttaaccctcacaataactctgtgaaacaggtactaccattatctccaactgacagaggaagactctaa------------gtgcagagatgttcagttagttgcccaaggtcacacagtaagcagcagactaggaattcaaaactaggcagcccaatttcaTATGTGAAATCACTTCCTTTCTAGCACTGTACCCATCCTC---TCTTCGCATTAGAAGGGAGAACC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100454263 263 - 115148730 AGTGCATGTTCTTAGCCA-----TTATATTgtactttacatgtattattttctttaaccctcacaataactctgtgaaacaggtactaccattatctccaactgacagaggaagacgctaa------------gtgcagagatgttcagttagttccccaaagtcacacagtaagcagcagactaggaattcaaaactaggcagcccaatttcatatgtgaaatcacttcttttctagcactgtacccatcatctcTTCTTCTCATTAGAAGCAAGAACC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80604594 258 + 95678458 agtgcatgttcttaacca-----ttatattgtactttacatatattattttctttaacccttgcaataactctatgaaacagataataccgttatctccaactgac--gcgaagatgctaa------------atgtagagacgttcagttagttgcccaaggtcacacagtaagcagcagactaggaattcaaaactaggcagcccaacttcatacgtgaaatcacttcctttctagcatcatactcatcctc---tCTTCTCATTAGAAGCGAGAACC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81031418 261 - 96509753 agtgcatgttcttaacca-----ttatattgtactttacatatattattttctttaacccttgcaataactctatgaaacagataataccgttatctccaactgac--gcgaagatgctaa------------atgtagagacgttcagttagttgcccaaggtcacacagtaagcagcagactaggaattcaaaactaggcagcccaacttcatacatgaaatcacttccttcctagcatcatactcatcctctCTTCTTCTCATTAGAAGCGAGAACC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76289701 261 + 90941950 AGTGCATGTTCTTAACCA-----TTATAttgtactttacatatattattttctttaacccTTGCAATAACTCTATGAAACAGATAATACCGTTATCTCCAACTGAC--GCGAAGATGCTAA------------ATGTAGAGACGTTCAGttagttgcccaaggtcacacagtaagcaGCAGACTAGGAATTCAAAACTAGGCAGCCCAACTTCATACGTGAAATCACTTCCTTTCTAGCATCATACTCATCCTCTCTTCTTCTCATTAGAAGCGAGAACC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18558296 246 + 33263144 agtgcatgttcttaacca-----ttatattgtactttacatatattattttctttaacccttgcaataactctattaaacagataataccgttatctccaactgac--acgaagacgctaa------------atgtagagatgttcagttagttgcccaaggtcacacagtaagcagcagactaggaattcaaaactag---------------AAGTGAAATCACTTCCTTTCTAGCATCATACTCATCCTCTCTTCTTCTCATTAGAAGCGAGAACC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198260348 259 + 210400635 agtgcat-ttctcaacca-----ttatattgtactttacacgtattattttctttaaccctcatggtaactctattcaacaggtactagcattatctccaactgacagaggaagaagctaa------------gtgcagaggtgttcagttagttgcccaaggtcacacagtaagtagcagactaggagttcaaaactaggcagcccaatttcaTATGTGAAATCACTTTTTTTCTAGCACCGTACCTATCCTC---TCTTCTCATTAGAAGCAAGAACC i calJac3.chr1 C 0 C 0 s canFam3.chr10 40880975 274 - 69331447 agtacatgctcttaaccactatgtcatgttgtaatctacatgtattatcttttctaatcctcacaataa-tctatgagataggcactattatta-ccccaaatgacagaggccgaaagtaaagtgcagagaaggcacagagaggttaag-taggtgccctcggtcacatattaagtggcagagcagaaactaaaaaccaggtggctgactttcatgtgctaggtc---tcctgtctggcatggcacccatgcttcctcCTTCTCCTTAGaaagaaaaaca i canFam3.chr10 I 1036 I 285 e mm10.chr15 77118980 3626 + 104043685 I a score=133257.000000 s hg38.chr22_KI270876v1_alt 107911 45 + 263666 CATACGAACCCCACCCCTCTCTTACCTTCTTAGGACTCTCATCTC s panTro4.chr22 34485885 45 + 49737984 CATACAAACCCCACCCCTCTCTTACCTTCTTAGGACTCTCATCTC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30901913 43 + 46535552 CATACGAACCCCACCC--CTCTTACCTTCTTAGGACTCTCATCTC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100454526 45 - 115148730 CATACGAACCCCACCCCTCTCTTACCTTCTTAGGACTCTCATCTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80604852 45 + 95678458 CATACGAATCCCACCCCTCTCTTACTTTCTTAGGACTCTCATCTC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81031679 45 - 96509753 CATACGAATCCCACCCCTCTCTTACTTTCTTAGGACTCTCATCTC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76289962 45 + 90941950 CATACAAATCCCACCCCTCTCTTACTTTCTTAGGACTCTCATCTC i papAnu2.chr10 C 0 M 414 s chlSab2.chr19 18558542 45 + 33263144 CATACGAATCCCACCCCTCTCTTACTTTCTTAGGACTCTCATCTC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198260607 44 + 210400635 CATATGAACCCCATCC-TCTCTTACCTTCTTAGGACTCTCAGCTG i calJac3.chr1 C 0 C 0 e mm10.chr15 77118980 3626 + 104043685 I e canFam3.chr10 40881249 285 - 69331447 I a score=815045.000000 s hg38.chr22_KI270876v1_alt 107956 378 + 263666 ATGCAGCAAGAGTCTCCGGGAGTGGAGACAGGCATGGGTAAGAGACACGGAAGGCTACACT-AGAGGTGACATGGGTTCTATACCTTTTT-AAAtttttttgagtaagggtctccctctgtcgcccaggctggagtgcagtgtggcaatctcagctcgctgcaacctccaccttctgggttcaactgatcctcctgccttagcctcccaaatagctgggactacaggtgcgagccactacacatgactaatttttata-ttttttgtagaaatggggttttgccatgttg-ccaggctggt-ttgaactcctgagctcaagcgatctgcctgcctcagcctcccaaagtgctagaattataggcatgagccactgtgcctggc s panTro4.chr22 34485930 378 + 49737984 ATGCAGCAAGAGTCTCCGGGAGTGGAGACAGGCATGGGTAAGAGACACGGAAGGCTACACT-AGAGGTGACATGGGTTCTATACCTTTTT-AAAtttttttgagtaagggtctccctctgtcgcccaggctggagtgcagtgtggcaatctcagcttgctgcaacctccaccttctgggttcaactgatcctcctgccttagcctcccaaatagctgggactacaggtgcgagccactacacatgactaatttttata-ttttttgtagaaatggggttttgccatgttg-ccaggctggt-ttgaactcctgagctcaagcgatctgcctgcctcagcctcccaaagtgctggaattataggcatgagccactgtgcctggc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30901956 365 + 46535552 ATGCAGCAAGAGTCCCCGGGAGTGGAGACAGGCATGGGTAAGAG--------------ACT-AGAGGTGACATGGGTTCTATACCttttt-ttatttttttgagtaagggtctccctctgtcgcccaggctggagtgcagtgtggcaatctcagctcgctgcaacctccaccttctgggttcaactgatcctcctgccttagcctcccaaatagctgggactacaggtgcgagccaccacacatgactaatttgtaca-ttttttgtagaaatggggttttgccatgttg-ccaggctggtctcgaactcctgagctcaagcaatctgcctgcctcagcctctcaaagtgctggaattacaggcatgagccactgtgcctggc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100454571 379 - 115148730 ATGCAGCAAGAGTCTCCGAGAGTGGAGACAGGCATGGGTAAGAGACACGGAAGGCTACCCT-AGAGGTGACATGGGTTCTATACCttttt-ttatttttttgagtaagagtctccctctgtcgcccaggctggagtgcagtgtggcaatctcagcttgctgcaacctccaccttctgggttcaactgatcctcctgccttagcctcccaaatagctgggactacaggtgccagccaccacacatgactaatttttata-ttttttgtagaaatggggttttgccatgttg-ccaggctggtctcaaactcctcagctcaagtgatctgcctgcctcagtctcccaaagtgctggaattacaggcatgagccactgtgcctggc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80604897 367 + 95678458 ACGCAGCAAGAGTCTCCGGGAGTGGAGACAGGCATGGGTAAGAGACAGGGAAGGCTACACT-AGAGATGACATGGGTTCTATACCTTTTTAAAAtttttttgagtaagggtctccctctgtcgcccaggatggagtgcagcacagcaaacttagctcactgcaacctccaccttctgggttcaactgatcctcctgccttagcttcccaagtagctgggactacaggtgtgagccaccatacacgactaatttttata-tattttttagagatggggttttgccatgttgcccaggctggtctcaaa--------------cgatctgcctgcctcagcctcccaaagtgctggaattataggcatgagccactgtgcctggc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81031724 367 - 96509753 ACGCAGCAAGAGTCTCCGGGAGTGGAGACAGGCATGGGTAAGAGACAGGGAAGGCTACACT-AGAGATGACATGGGTTCTATACCTTTTTAAAAtttttttgagtaagggtctccctctgtcgcccaggatggagtgcagtacagcaaacttagctcactgcaacctccaccttctgggttcaactgatcctcctgccttagcttcccaagtagctgggactacaggtgcgagccaccatacacgactaatttttata-tattttttagagatggggttttgccatgttgcccaggctggtctcaaa--------------cgatctgcctgcctcagcctcccaaagtgctggaattataggcatgagccactgtgcctggc i macFas5.chr10 C 0 C 0 s chlSab2.chr19 18558587 379 + 33263144 ATGCAGCAAGAGTCTCCGGGAGTGGAGACAGGCATGGGTAAGAGACAGGGAAGGCTACACT-AGAGATGACATGGGTTCTATGCCTTTTTAAAAAttttttgagtaagggtctccctctgtcg-ccaggacggagtgcagtgcagcaaccttagctcactgcaacctccaacttctgggttcaactgatcctcccgccttagcttcccaagtagctgggactacaggtgcaagccaccatacacgactaatttttata-cattttttagagatggggttttgccatgttgcccaggccggtctcaaactcctgagctcaagcgatctgcctgcctcagcctcccaaagtgctggaattata-gcatgagccactgtgcctggc i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198260651 378 + 210400635 CTGTATCAAGAGTCTCTCAGAGTGGAGACAGGTATGGGTAAGAGGCAGGGAAGGGTGCACTAAGAGGTAACAGGGGTTCTATACCATTTT----TTTCCCCCagaaagggtctccctctgtcacccaggctgaagtgcagtgtggcaatcttagctcactgcaacctctaccttctgggtgcaactcatcctcctgccttagcctcccaagtagctgggacaacaggtgtgagccaccacgcatggctgatttttatatttttttgtagagacagggttttgccacgttgctcaggctgctcttgaactcctgagctcaagcaatctgcctacctcagcctctcaaagtgctggaattacaggcatgagccactgggccTCG- i calJac3.chr1 C 0 C 0 e mm10.chr15 77118980 3626 + 104043685 I e canFam3.chr10 40881249 285 - 69331447 I e papAnu2.chr10 76290007 414 + 90941950 M a score=491120.000000 s hg38.chr22_KI270876v1_alt 108334 192 + 263666 TAGGTTCTATACCTTGAGGAAAGAGAAATAGGTCAGGCTATGCAGAgaaagggaaaggaaagggagagaaaagaaaACCAGCAAAGGGATG----CTGACATTTAATTAGGAAAAAAGCCAAAGA---ACTACTAAACTGATAC----AGGGACTTAAAAGTGG-TTTTCTGTACAGAGTAGAAATAGGAATAGAAAATATTGG s panTro4.chr22 34486308 192 + 49737984 TAGGTTCTATACCTTGAGGAAAGAGAAATAGGTCAGGCTATGCAGAGAAAGGGAAAGGAAAGGGAGAGAAAAGAAAACCAGCAAAGGGATG----CTGACATTTAATTAGGAAAAAAGCCAAAGA---ACTACTAAACTGATAC----AGGGACTTAAAAGTGG-TTTTCTGTACAGAGTAGAAATAGGAATAGAAAATATTGG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30902321 192 + 46535552 tAGGTTCTATACCTTGAGGAAAGAGAAATAGGTCAGGCTATGCAGAGAAAGGGAAAGGAAAGGGAGAGAAAAGAAAACCAGCAAAGGGATG----CTGACATTTAATTAGGAAAAAAGCCAAAGA---ACTACTAAACTGATAC----AGGGACTTAAAAGTGG-TTTTCTGTACAGAGTAGAAATAGGAATAGAAAATATTGG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100454950 191 - 115148730 TAGGTTCTATACCTTAAGGAAGGAGAAATAGGTCAGGCTATGCAGAGAAAGGGAAAGGAAGGGGAGAG-AAAGAAAAGCAGCAAAGGGATG----CTGACATTTAATTAGGAAAAAAGCCAAAGA---ACTACTAAACTGATAC----AGGGACTTAAAAGTGG-TTTTCTGTACAGAGTAGAAATAGGAATAGAAAATATTGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80605264 186 + 95678458 TGGGTTCTATATCCTAAGGAAAGAGAAACAGGTCAGGCTATGCAGA------GAAAGGAAAGGGAGAGAAAAGAAAATCAGCAAAGGGATG----CTGACATTCAATTAGGAAAAAAGCCAAAGA---ACTACTAAACTGATAT----AGGGACTTAAAAGTGG-TTTTCTGTACAGAGTAGAAATAGGAATAGAAAATATTGG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81032091 186 - 96509753 TGGGTTCTATATCCTAAGGAAAGAGAAACAGGTCAGGCTATGCAGA------GAAAGGAAAGGGAGAGAAAAGAAAATCAGCAAAGGGATG----CTGACATTCAATTAGGAAAAAAGCCAAAGA---ACTACTAAACTGATAT----AGGGACTTAAAAGTGG-TTTTCTGTACAGAGTAGAAATAGGAATAGAAAATATTGG i macFas5.chr10 C 0 C 0 s chlSab2.chr19 18558966 186 + 33263144 TGGGTTCTATACCTTGAGGAAAGAGAAACAGGTCAGGCTATGCAGA------GAAAGGAAAGGGAGAGAAAAGAAAATCAGCAAAGGGATG----CTGACATTCAATTAGGAAAAAAGCCAAATA---ACTACTAAACTGATAT----AGGGACTTAAAAGTGG-TTTTCTGTACAGAGTAGAAATAGGAATAGAAAATATTGG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198261029 196 + 210400635 TGGGTTCTATACCTTGACAAAAGAAAAATAGGTCAGGCTATGCAGAGAAAGGGAAAGGGAAGGGAGAGAAAATAAAACCAGCAAAGGTAGG----CTGACATTTAATTAGGAAAAAAGCCAAAGAACTACTACTAAACTGATGC----AGGGATGTAAAAGTGGTTTTTCTGTACAGAGCAGAAATAGAAATAGAAAATACTGG i calJac3.chr1 C 0 C 0 s canFam3.chr10 40881534 178 - 69331447 TATATTCTATACCTTGAAGGAAGAGGAGCAGGTCAG----------------GGAGGAAAAGCAAGGGGAAGAAAACCCGGCAAAAGCAAGCACACAGGCACTCAA--AGGAAAACAG-CAGACA---GTTACCAAACTGATACTCAAAGGGGCTGAGGAGCAG-ATTTCTGTACATAATGGACATAGGAATAGGAAATAT--- i canFam3.chr10 I 285 C 0 e mm10.chr15 77118980 3626 + 104043685 I e papAnu2.chr10 76290007 414 + 90941950 M a score=118220.000000 s hg38.chr22_KI270876v1_alt 108526 47 + 263666 TCATACTATATT-AACGTACTTAAATGAGATCTT--------------------------------------------------------------------------ATCTCACAACTGGG s panTro4.chr22 34486500 47 + 49737984 TCATACTACATT-AACGTACTTAAATGAGATCTT--------------------------------------------------------------------------ATCTCACACCTGGG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30902513 47 + 46535552 TCATGCTACATT-AATGTACTTAAATGAGATCTT--------------------------------------------------------------------------ATCTCACACCTGGG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100455141 47 - 115148730 TCATGCTACATT-AATGTACTTAAATGAGATCAT--------------------------------------------------------------------------ATATCACACCTGGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80605450 45 + 95678458 TCATGCTATATT-AATGTACTTAAATGAGATCTT--------------------------------------------------------------------------ATCTCACACCT--G i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81032277 45 - 96509753 TCATGCTATATT-AATGTACTTAAATGAGATCTT--------------------------------------------------------------------------ATCTCACACCT--G i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76290421 45 + 90941950 TCATGCTATATT-AATGTACTTAAATGAGATCTT--------------------------------------------------------------------------ATCTCACACCT--G i papAnu2.chr10 M 414 C 0 s chlSab2.chr19 18559152 45 + 33263144 TCATGCTATATT-AATGTACTTAAATGAGATCTT--------------------------------------------------------------------------ATCTCATACCT--G i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198261225 45 + 210400635 TCATGCTATATT-AATGTACTTAAATGAGATCGT--------------------------------------------------------------------------ATCTCACACCT--G i calJac3.chr1 C 0 C 0 s canFam3.chr10 40881712 115 - 69331447 -------ATATTGAATGTAATTAAATGAGATACTTTgggcagccctggtggctcagcggtttagcgccgccttcggcctggggtgtgatcctggagacctgggatcgagtcccacgttgggg i canFam3.chr10 C 0 I 112 e mm10.chr15 77118980 3626 + 104043685 I a score=1212657.000000 s hg38.chr22_KI270876v1_alt 108573 346 + 263666 ACATTCTC-ACTTTAAATTTATCCCAATACAGACTACTAATTGCTGAAATATATAAATCAGAGAGAAAAAGGGAAATAAAAGTTTTTAAGTCTTATCTTTGTGAAAAGTGGACAGTTAAA---ATTGATCTAAGAAAAATCTCAGTCTAC-AACAGCACTGGTCTGCATTATTTTCTCTTGCTAGCTGCTGAGCACCTTTACTGACCATATAAACAACTTTCCAAGGTTGTGGTTTTCCCTTTTGTGGTCATTATCCGACCTAACGTATCCACTGGGCAAGGCATAAAACAGAAGAGGCTGGATGGAGTCCGTTCACCGACAGTTTAGAGTGAGGACTAGCGGCAGTGCTG--- s panTro4.chr22 34486547 346 + 49737984 GCATTCTC-ACTTTAAATTTATCCCAATACAGACTACTAATTGCTGAAATATATAAATCAGAGAGAAAAAGGGAAATAAAAGTTTTTAAGTCTTATCTTTGTGAAAAGTGGACAGTTAAA---ATTGATCTAAGAAAAATCTCAGTCTGC-AACAGCACTGGTCTGCATTATTTTCTCTTGCTAGCTGCTGAGCACCTTTACTGACCATATGAACAACTTTCCAAGGTTGTGGTTTTCCCTTTTGTGGTCATTATCCGACCTAACGTATCCACTGGGCAAGGCATAAAACAGAAGAGGCTGGATGGAGTCCGTTCACCGACAGTTTAGAGTGAGGACTAGCAGCAGTGCTG--- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30902560 346 + 46535552 ACATTCTC-ACTTTAAATTTATCCCAATATAGAACACTAATTGCTGAAATATATAAATCAGAGAGAAAAAAGGAAATAAAAGTTTTTAAGTCTTATCTTTGTGAAAAGTGGACAGTTAAA---ACTGATCTGAGAAAAATCTCAGTCTAC-AACAGCACCGGTCTGCATTATTTTCTCTTGTTAGCTGCTGAGCACCTTTACTGACCACATAAACAACCTTCCAAGGTTGTGGTTTTCCCTTTTGTGGTCATTATCTGACCTAACGTATCCAGTGGGCAAGGCATAAAACAGAAGAGGCTGGATGGAGTCCATTCACCGACAGTTTAGAGCGAGGACTGGCAGCAGTGCTG--- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100455188 346 - 115148730 ACATTCTC-ACTTTAAATTTATCCCAATATAGACTACTAACTGCTGAAATATATAAATCAGAGAGAAAAAAGGAAACAAAAGTTTTTAAGTCTTATCTTTGTGAAAAGTGGACAGTTAAA---ACTGATCTAAGAAAAATCTCTGTCTAC-AACAGCACTGGTCTGCATTATTTTCTCCTGTTAGCTACTGAGCACCTTTACTGACCATATAAACAACTTCCCAAGGTTGTGGTTTTCCCTTTTGTGGTCATTATCCAATCTAACGTATCCACTGGGCAAGGCATAAAACAGAAGAGGCTGGATGGAGTCCGTTCACCGACAGTTTAGAGCGAGGACTGGCAGCAGTGCTG--- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80605495 346 + 95678458 ACATTCTC-ACTTTAAATTTATCCCAATATAGACTACTAATTTCTGAAATATATAAATCAGACAGAAAAAAGGAAATAAAAGTTTTTAAGCCTTATCTTTGTGAAAAGTGGACAGTTAAA---ACTGATCTAAGAAAAAGCTCAGTCTAT-AACAGCACTGGTTTGCATTATTTTCTCTTGTTAGCTGCTGAGCACCCTTACTGACCATATAAACAACCTTCCAAGGTTGTGGTTTTCCCTTTTGTGGTCATTATCCAACCTAACGTATCCACTGGGCAAGGCATAAAAGAGAAGAGGCTGGACGGAGTCCGCTCACCGACAGTTTACAGCGAGGACTGGCAGCAGTGCTG--- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81032322 346 - 96509753 ACATTCTC-ACTTTAAATTTATCCCAATATAGACTACTAATTTCTGAAATATATAAATCAGACAGAAAAAAGGAAATAAAAGTTTTTAAGCCTTATCTTTGTGAAAAGTGGACAGTTAAA---ACTGATCTAAGAAAAAGCTCAGTCTAT-AACAGCACTGGTTTGCATTATTTTCTCTTGTTAGCTGCTGAGCACCCTTACTGACCATATAAACAACCTTCCAAGGTTGTGGTTTTCCCTTTTGTGGTCATTATCCAACCTAACGTATCCACTGGGCAAGGCATAAAAGAGAAGAGGCTGGACGGAGTCCGCTCACCGACAGTTTACAGCGAGGACTGGCAGCAGTGCTG--- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76290466 346 + 90941950 ACATTCTC-ACTTTAAATTTATCCCAATATAGACTACtaatttctgaaatatataaatcagagagaaaaaaggaaataaaagtttttaagcCTTATCTTTGTGAAAAGTGGACAGTTAAA---ACTGATCTAAGAAAAAGCTCAGTCTAT-AACAGCACTGGTTTGCATTATTTTCTCTTGTTAGCTGCTGAGCACCCTTACTGACCATATAAACAACCTTCCAAGGTTGTGGTTTTCCCTTTTGTGGTCATTATCCAACCTAACGTATCCACTGGGCAAGGCATAAAAGAGAAGAGGCTGGACGGAGTCCGCTCACCAACAGTTTACAGCGAGGACTGGCAGCAGTGCTG--- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18559197 346 + 33263144 ACATTCTC-ACTTTAAATTTATCCCAATATAGGCTACTAATTTCTGAAATACATAAATCAGAGAGAAAAAAGGAAATAAAAGTTTTTAAGCCTCATCTTTGTGAAAAGTGGACAGTTAAA---ACTGACCTAAGAAAAAGCTCAGTCTAT-AACAGCACTGGTTTGCATTATTTTCTCTTGTTAGCTGCTGAGCACCCTTACTGACCATATAAACAACCTTCCAAGGTTGTGGTTTTCCCTTTTGTGGTCATTATCCAACCTAACGTATCCACTGGGCAAGGCACAAAAGAGAAGAGGCTGGATGGAGTCCGCTCACCGACAGTTTACAACGAGGACTGGCAGCAGTGCTG--- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198261270 345 + 210400635 ACATTCTC-ATTTTAAGTTGATCCCAATATAGACTACTAATTGCTGAAATATACAAATCAGAGAGAAAAAAGGAAATAAAA-TTTTTACGTCTTATCTTTGTGGAAAGTGGACAGTT-AA---TCTGATCTAAGAAAAATCTCAGTCTGTAAACAGCACTGGTTTGCATTATTTTCTATTGTTAGCTGCTGAGCACCTTTACTGACCATATAAATAACCCTTCCAAGTTGTGGTTTTCCCTTTCGTGGTCATTATCCGACCTAATGTATCCACCGGGCAAGGGATAAAACAGAAGAGGCTGGATGGAATCCATTCACCAACAGTTTACAGTGAGGACTGGCAGTAGTGCTG--- i calJac3.chr1 C 0 C 0 s canFam3.chr10 40881939 345 - 69331447 ACATCCCCAACTTTAAGTGTACCTCAATATCAACTACTACTTGTTGAAATAGACAAATCAGACAGAAATA-GTAAGTAAAAGTTTTTAAGCTATAACTTTGTGAAAAGTGGACAGCAGAACTGTTTGTTCTGAGAAAAATATTAGTCTAC----ACCATTGGTTTGCTTTATTTCCTATTGTTAGCTACTGAGCCACGTTACCAACCATATAAACAACCTCCCAAGGTTCTGTTCTTCCCTTCTGTGGTCATTTTCTGACCTGATTTATTCACTGGGCAGGAGATGAAACAGAAGAGGCT----GGAGTCTGTGCACTGAGAGTTTATGGCAAGGGCTGACAGTGACACTGCTG i canFam3.chr10 I 112 I 141 e mm10.chr15 77118980 3626 + 104043685 I a score=1003978.000000 s hg38.chr22_KI270876v1_alt 108919 306 + 263666 GCCTGATGC---------------------AATCATAT----GGCTAAAA---------------------------------CCTATACATCTACCCTTCAAACAACTCATCTTCCCTGGTGCAGCTGAGCTAGCCATCAACACTGCACAGGA--GGTCGGCACCAATTACACTT------------AATAGCAAACTAGAATTTTAAGTCTCAGAATCTCATCCTAGAAATGAGGACTACAAATGTTTTC-TTTTTTTGATGACTTCAAATTTTTAAA-----ATACTTCTAACTAGGAAATTGATTGATTTTTCTGACTCTTCTATGATACAATGGAAATATTTTAACTATACATTGTCAACAAATGTTCTGTCATAATCT s panTro4.chr22 34486893 306 + 49737984 GCCTGATGC---------------------AATCATAT----GGCTAAAA---------------------------------CCTATACATCTACCCTTCAAACAACTCATCTTCCCTGGTGCAGCTGAGCTAGCCATCAACACTGCACAGGA--GGTCGGCGCCAATTACACTT------------AATAGCAAACTAGAATTTTAAGTCTCAGAATCTCATCCTAGAAATGAGGACTACGAATGTTTTC-TTTTTTTGATGACTTCAAATTTTTAAA-----ATACTTCTAACTAGGAAATTGATTGATTTTTCTGACTCTTCTATGATACAATGGAAATATTTTAACTATACATTGTGAACAAATGTTCTGTCATAATCT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30902906 305 + 46535552 GCCTGATGC---------------------AATCATAT----GGCTAAAA---------------------------------CCTAAACATCTACCCTTCAAACAACTCATCTTCCCTTGTGCAGCTGAGCTAGCCATCAACACTGCACAGGA--GGTCGGTGCCAATTACACTT------------AATAGCAAACTAGAATTTTAAGTCTCAGAATCTCATCCTAGAAATGAAGACTACAAATGTTTTC--TTTTTTGATGACTTCAAATTTTTAAA-----ATACTTCTAACTAGGAAATCGATTCATTTTTCTGACTCCTCTATGATACAATGGAAATATTTTAACTATACATTGTGAACAAATGTTCTGTCATAATCT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100455534 301 - 115148730 GCCTGATGC---------------------AATCATAT----GGCTAAAA---------------------------------CCTATACATCTACCCTTCAAACAGCTCATCTTCCCTGGTGCAGCCGAGCTAGCCATCAACACTGCAAGGGGATGGTCGGCGCCAATTACACTT------------AATAGCAAACTAGAATTTTAAGTCTCAGAATCTCATCCTAGAAATGAGGACTATAAATGTTTTC-TTTTTTTGATAACTTCAAATTTTTAAA-----ATACTTCTAACTAGGAAATTGATTCATTTTTCTGACTCCTCTATGATACAATGGAAATATT-------TACATTGTGAACAAATGTTCTGTCATAATCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80605841 307 + 95678458 GCCTGACGC---------------------AATCATAC----AGCTAGAA---------------------------------CCTACACATCTACCCTTCAAACAACTCATCTTCCCTGGCGCAGCTGAGCTAGCCATCAACACTGCACAGGA--GGTCGGCACCAATTACACTT------------AATAGCAAACTAGAATTTTAAGTCTCAGAATCTCATCCTAGAAATGAGGACTACAAATGTTTTCTTTTTTTTGATGACTTCAAACTTTTAAA-----ACACTTTTAACTAGGAAATTGATTCATTTTTCTGACTCCTCTACGATACAATGGAAATATTTTAACTATACATTGTGAACAAATGTTCTATCATAATCT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81032668 307 - 96509753 GCCTGACGC---------------------AATCATAC----AGCTAGAA---------------------------------CCTACACATCTACCCTTCAAACAACTCATCTTCCCTGGCGCAGCTGAGCTAGCCATCAACACTGCACAGGA--GGTCGGCACCAATTACACTT------------AATAGCAAACTAGAATTTTAAGTCTCAGAATCTCATCCTAGAAATGAGGACTACAAATGTTTTCTTTTTTTTGATGACTTCAAACTTTTAAA-----ACACTTTTAACTAGGAAATTGATTCATTTTTCTGACTCCTCTACGATACAATGGAAACATTTTAACTATACATTGTGAACAAATGTTCTATCATAATCT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76290812 307 + 90941950 GCCTGACGC---------------------AATCATAC----AGCTAGAA---------------------------------CCTACACATCTACCCTTCAAACAACTCATCTTCCCTGGCGCAGCTGAGCTAGCCATCAACACTGCACAGGA--GGTCGGCACCAATTACACTT------------AATAGCAAACTAGAATTTTAAGTCTCAGAATCTCATCCTAGAAATGAGGactacaaatgttttcttttttttgatgacttcaaacttttaaa-----acactTATAACTAGGAAATTGATTCATTTTTCTGACTCCTCTACGAtacaatggaaatattttaactaTACATTGTGAACAAATGTTCTATCATAATCT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18559543 316 + 33263144 GCCTGACGC---------------------AATCATAT----GGCTAGAA---------------------------------TCTACACATCTACCTTTCAAACAACGCATCTTCCCTGGCGCAGCTGAGCTAGCCATCGACACTGCACAGGA--GGTCGGCACCAATTACACTTAATAGAAACTAGAATAGCAAACTAGAATTTTAAGTCTCAGAATCTCATCCTAGAAATAAGGACTACAAATGTT---TTTTTTTTGATGACTTCAAACTTTTAAA-----ACACTTATAACTAGGAAATTGATTCATTTTTCTGACTCCTCTACGATACAATGGAAATATTTTAACTATACATTGTGAACAAACGTTCTATCATAATCT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198261615 309 + 210400635 GCCTGATGC---------------------AATCACAC----AGCTAAAG---------------------------------CCTATACATCTACCCTTCAAACAACTCATCTTTCCTGGTGCAGCTGAGCTAGCCATCAACACTTCACAGGA--GGCTGGTGTCAATTACATTT------------AATAGCAAATTAGATTTTTAAGTCTCAAAATCTCATCCTAGAAATGAGGACTACAAACTTTT---TTTTTTTAATGAGTTCTAACTTTTAAATAGATTCATTTATAACTAGGAAATAGATTCATTTTTCTGACTCCTCTATGAAACAATGGAAATATTTTAACTATACATTGTGAACAAATTTTCTGTCATAATCT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40882425 352 - 69331447 gcctgatgtgggacttgatccctggatagggatcacacccagagccgaaggcagatgcttaaccactgagccatgtaggtgtcccTATAGATCTACTCTTTAAACAACTCAGCTGCCCCAGTGAGGTCTGGCTATCTGTCCCAACTGCAGAGGA--GTCCAGGGCTCTTTACACTG------------AAGAGCAAATCAGATTTACAAGTCTCAAAGCCTCATTCTAGAAATGAGGACTAAAAATGTT----------TGATGAACTCAAACTTTTAAA-----ATTCCTGTAACTATGAAATGAATTAGTTT---TGACTTCTCTATGAAACAATTTAAATATTTTAACTATGGACTGTGAACAAATGTGCTGTTATGGTCT i canFam3.chr10 I 141 I 204 e mm10.chr15 77118980 3626 + 104043685 I a score=3665559.000000 s hg38.chr22_KI270876v1_alt 109225 1124 + 263666 AAAGGGAATTCTGAGTGACACAAGATTAAGTATAACTTTCCAAG--TCTATCAGATTAAGATTAAACACATACGACTCTGATATAGATACTAAGGAATCTCTTAATGAATTCAGA---AATATTTTGATTTATGGA-TTATCCACTTTCTTCAATATTTATTTTTCCTCTTC-CCCCCCGTCCCCCAATAGAAGTCTTCATTTCTTATTTTCATCTCTTTGAGGCTAACAGAGAAAAAAAGCAAAATAGGAAATTCAGTTTAGCACAgtaaattttttgagaatctgat--tcatggctgaaaatatctatttaaccatcccagtttaatgatagtttggctggtcacagaattataggttgg--aaaaaaaaatcccttcagaattttgaagataactctcaattgtcttctagcttttagccttgctgctgagaaatctgaaggcatgattcccatctccttgtatgtgacttttttcttctctcttgcagcttgtaggactatccaaatacacctgatgttctaaaacagtgtccatagttatatgcctcagtgtggacttgtttcattttcacctactttgtggagaattctgtggtctctttcaagatgaaaattaatgtcc-tcagtcct-ggaagttttcttgtgtta-tcgggtgatgattctcacgctacacat------tttctttcgggaagctgtatta----ttggatcttctggaccggtcctctaattttcacatctcttctcttgtatttcccatctctgcctttttgctccatttttctgggatataggtccttaatctcttatctgaaacctttgcggccaaatgctta-------tcagaatttttagaattttagaaagttaatatagaatat--aacccataatgtaatacccACCCCTCATCCCACCCACATACAATGAGATCTGAGACAGTGATATTTCTTTA---GCA-------AAATCTATAAAGGATAGAAATAG-------GTTGTGTTGTaaacttatgaaaa---atataattttcagaac-ttttgggattttggaattgtggataagagaccgtAggccaggtagagcggctcacacctgtaatcccagcactttgggaggctgaggtgggtggatcacctgaggtcacgagttcaagaccagcct s panTro4.chr22 34487199 1123 + 49737984 AAAGGGAATTCTGAGTGACACAAGATTAAGTATAACTTTCCAAG--TCTATCAGATTAAGATTAAACACATATGACTCTGATATAGATACTAAGGAATCTCTTAATGAATTCAGA---AATATTTTGATTTATGGA-TTATCCACTTTCTTCAATATTTATTTTTCCTCCT--CCCCCCGTCCCCCAATAGAAGTCTTCATTTCTTATTTTCATCTCTTTGAGGCTAACAGAGAAAAAAAGCAAAATAGGAAATTCAGTTTAGCACAgtaaattttttgagaatctgat--tcatggctgaaaatatctatttaaccatcccagtttaatgatagtttggctggtcacagaattctaggttgg--aaaaaaaaatcccttcagaattttgaagataactctcaattgtcttctagcttttagctttgctgctgagaaatctgaagacatgattcccatctccttgtatgtgacttttttcttctctcttgcagcttgtaggactatccaaatacacctgatgttccaaaacagtgtccatagtgatatgcctcagtgtggacttgtttcattttcacctgctttgtggagaattctatggtctctttcaagatgaaaattaatgtcc-tcagtcct-ggaagttttcttgtgttg-tcgggtgatgattctcatgctacacat------tttctttctggaagctgtatta----ttggatcttctggaccggtcctctaattttcacatctcttctcttgtatttcccatctctgcctttttgctccatttttctgggatataggtccttaatctcttatctgaaacctttgcggccaaatgctta-------tcagaatttttagaattttagaaagttaatatagaatat--aacccataatgtaatacccacctctcatcccacccacatacaatgagatctgagacagtgatatttcttta---gca-------aaatctataaaggacagaaatag-------gttgtgttgtaaacttatgaaaa---atataattttcagaac-ttttgggattttggaattgtggataagagactgtAggccaggtagagcggctcacacctgtaatcccagcactttgggaggctgaggtgggtggatcacctgaggtcacgagttcaagaccagcct i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30903211 1125 + 46535552 AAAGGGAATTCTGAGTGATACAAGATTAAGTATAACTTTCCAAG--TCTATCAGATTAAGATTAAACACATACTACTCTGAGACAGATACTAAGGAATCTCTTAATGAATTCAGA---AATATTTCGATTTATGGA-TTATTCACTTTCTTCAATATTTATTTTTCCTCTTT-CCCCCTGTCCCCCCATAGAAGTCTTCATTTCTTATTTTCATCTCTTTGAGGCTAACAGAGAAAAAAAGCAAAATAGGAAATTCAGTTTAGCACAgtaaattttttgagaatctgat--tcatggctgaaaatatctatttaaccatcctagtttgatgatagtttggctggtcacagaattctaggttggaaaaaaaaaaatcccttcaaaatttcgaagataactctcaattgtcttctagcttttagccttgctggtgagaaatctgaaggcatgattcccatctccttgtatgtgacttttttcttctctcttgcagcttgtaggactatccaaatacacctgatgttctaaaaca-tgtccatagtgatatgcctcagtgtggacttgtttcattttcatctattttgtggagaattctgtggtctctttcaagttgaaaattaatgtcc-ttggtcct-gaaagttttcttgcgtta-tcgggtgatgattcccactctacacat------tttctttctggaagctgtatta----ttggatcttctggaccggtcctctaattttcacatctcttctcttgtatttcccatctctgcctttttgcttcatttttctgggatataggtccttaatctcttatctgaaacctttgggaccaaatgcgta-------tcagaatttttaaaattttcgaaagttaatatagaatat--aacccataatgtaatacccACCCCTCATCCCACCCACATACAATGAGAGCTGAGGCAGTGATATTTCTTTA---GCA-------AAATCTATAAAGGATAGAAATAG-------GTTGTGTTGTaaacttatgaaaa---atataattttcagaac-ttttgggattttggaattgtggataagagactgtAggccaggtagagcggctcacgcctgtaatcccagcactttgggaggctgaggtgggtggatcacctgaggtcacgagttcaagaccaccct i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100455835 1125 - 115148730 AAAGGGAATTCTGAGTGATACAAGATAAAGTATAACTTTCCAAG--TCTATCAGATTAAGATTAAACACATACTACTCTGAGATAGATACTAAGGAATTTCTTAATGAATTCAGA---AATATTTCGATTTATGGA-TTATCCACTTTCTTCAATATTTATTTTTCCTCTTCACCCCCCGTCCCCCCATAGAAGTCTTCATTTCTTATTTTCATCTCTTTGAGGCTAACAGAGAAAAAAAGCAAAATAGGAAATTCAGTTTAGCACAgtaaattttttgagaatctgat--tcatggctgaaaatatctatttaaccatcccagtttaatgacagtttggctggtcacagaattctaggttgg--aaaaaaaaatcccttccgaattttgaagataactctcgattgtcttctagcttttagccttgctgctgagatatctgaaggcatgattcccatctccttgtatgtgacttttttcttctctcttgcagcttgtaggactatccaaatacacctgatgttctaaaacagcgtccatagtgatatgcctcagtgtggacttgtttcattttcatctattttgtggagaattctgtggtctctttcaagttggaaattaatgtcc-tcagtcct-ggaagttttcttgtgtca-ctgggtgatgattcccactctacacat------tttctttctggaagctgtatta----ttggatcttctggaccggtcctctaattttcacatctcttctcttgtatttcacatctctgcctttttgctccatttttctgggatataggtccttaacctcttatctgaaacctttggggccaaatgtgta-------tcagaatttttagaattttagaaagttaatatagaatat--aacccataatgtaatacccACCCCTCATCCCACCCACATACAATGAGATCTGAGGCAGTGATATTTCTTTA---GCA-------AAATCTATAAAGGATAGAAATAG-------GTTGTGTGGTAAACTTGTGAAAA---ATATAAttttcagaac-ttttgggatattggaattgtggataagagactgtAggccaggtagagtggctcacgcctgtaatcccagcactttgggaggctgaggtgggtggatcacctgaggtcacgagttcaagaccagact i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80606148 1124 + 95678458 AAAGGGAATTCTGAGTGATACAAGATTAAGTATAACCTTCCAAG--TCTATCAGATTAAGATTAGACACATACTACTCTGAGGTAGATACTAGGGAATCTCTCAATGAATTCAGA---AATATTTTGATTTGTGGA-TTATCCACTTTCTTCAATATTTATTTTTCCTCTT--TCCCCCGCCCCCACATAGAAGTCTTCATTACTTATTTTCATCTCTTTGAGGCTAACAGAGAAAAGAAGCAAAATAGGAAATTCAGTTTAGCACAgtaaagtttttgaaaatctgat--tcatggctgaaaatatctatttaaccatcccagtttaatgacagtttagctggtcacagaattctaggttgg--aaaaaagaatcccttcagaattttgaagataactctcaactgtcttctagcttttagccttgctgctgagaaatctgaaggcatgattcccatctccttgtatgtgtcttttttcttctttcttgcagcttgtaggactatccaaatacacttgatgttctaaaacggtgtcgatagtgatatgcctcagtgtggacttgtttcattttcatctattttgtggagaattctgtgggctctttcaagtcggaaattaatgtcc-tcagtgctgggaggttttcttgtgtta-tcgggtgattattcccactctatacat------tttctttcttgaagcaatatta----ttggatcttctagaccagtcctctaattttcacatctcttctcttgtatttcccatctctgcctttttgctccatttttctaggatacaggtccttaatctcttatctgaaacctttggggccaaatgcgta-------tcagaatttttacaattttagaaagttaatatagaatat--aacccataatgtaatacccACCCCTCATCCCACCCACATACAATGAGATCTGAGGCAGTGATATTTCTTTA---GCA-------AAATCTATAAAGGATAGAAGTAG-------GTTGTGTTGTaaatttatgaaaa---atacaattttcagaac-tttttagattttggaattgtggataagagactgtAggccaggtagagtggctcacacctgtaatcccagcactttgggaggccgaggcaggtggattacctgaggtcaggagttcaagaccagcct i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81032975 1124 - 96509753 AAAGGGAATTCTGAGTGATACAAGATTAAGTATAACCTTCCAAG--TCTATCAGATTAAGATTAGACACATACTACTCTGAGGTAGATACTAAGGAATCTCTCAATGAATTCAGA---AATATTTTGATTTGTGGA-TTATCCACTTTCTTCAATATTTATTTTTCCTCTT--TCCCCCGCCCCCACATAGAAGTCTTCATTACTTATTTTCATCTCTTTGAGGCTAACAGAGAAAAGCAGCAAAATAGGAAATTCAGTTTAGCACAgtaaagtttttgaaaatctgat--tcatggctgaaaatatctatttaaccatcccagtttaatgacagtttagctggtcacagaattctaggttgg--aaaaaagaatcccttcagaattttgaagataactctcaactgtcttctagcttttagccttgctgctgagaaatctgaaggcatgattcccatctccttgtatgtgtcttttttcttctttcttgcagcttgtaggactatccaaatacacttgatgttctaaaacggtgtcgatagtgatatgcctcagtgtggacttgtttcattttcatctattttgtggagaattctgtgggctctttcaagtcggaaattaatgtcc-tcagtgctgggaggttttcttgtgtta-tcgggtgattattcccactctatacat------tttctttcttgaagcaatatta----ttggatcttctagaccagtcctctaattttcacatctcttctcttgtatttcccatctctgcctttttgctccatttttctaggatacaggtccttaatctcttatctgaaacctttggggccaaatgcgta-------tcagaatttttacaattttagaaagttaatatagaatat--aacccataatgtaatacccACCCCTCATCCCACCCACATACAATGAGATCTGAGGCAGTGATATTTCTTTA---GCA-------AAATCTATAAAGGATAGAAGTAG-------GTTGTGTTGTaaatttatgaaaa---atacaattttcagaac-tttttagattttggaattgtggataagagactgtAggccaggtagagtggctcacacctgtaatcccagcactttgggaggccgaggcaggtggattacctgaggtcaggagttcaagaccagcct i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76291119 1119 + 90941950 AAAGGGAATTCTGAGTGATACAAGATTAAGTATAACCTTCCAAG--TCTATCAGATTAAGATTAAACACATACTACTCTGAGGTAGATACTAAGGAATCTCTCAatgaattcaga---aatattttgattTGTGGA-TTATCCActttcttcaatatttatttttcctctt--tcccccGCCCCCACATAGAAgtcttcatttcttattttcatctctttgaggctaacagagaaaagaagcaaaataggAAATTCAGTTTAGCACAGTAAAGTTTTTGAAAATCTGAT--TCATGGctgaaaatatctatttaacCATCCCAGTTTAATGACAGTTTAGCTGGtcacagaattctaggttgg--aaaAAAGAATCCCCTCAGAATTTTGAAGATAACTCTCAACTGTCTTCTAGCTTTTAGCCTTGCTGCTGAGAAATCTGAAGGCATGATTCCCATCTCCttgtatgtgtcttttttcttctttcttgcagCTTGTAGGACTATCCAAATACACCTGATGTTCTAAAACGGTGTCGATAGTGATACGCCTCAGTGTGGACTTGTTtcattttcatctattttgtgGAGAATTCTGTGGGCTCTTTCAAGTTGGAAATTAATGTCC-TCAGTGCTGGGAAGTTTTCTTGTGTTA-TCGGGTGATTATTCCCACtccatacat------tttctttcttgaggCAATATTA----TTGGATCTTCTAGA-----CCTCTAATTTTCACATCTCTTCTCTTGTATTTCCCATCTCTGCCTTTTTGCTCCATTTTTCTAGGATACAGGTCCTTAATCTCTTATCTGAAACCTTTGGGGCCAAATGCGTA-------TcagaatttttacaattttagaaAGTTAATATAGAATAT--AACCCATAATGTAATACCCACCCCTCATCCCACCCACATACAATGAGATCTGAGGCAGTGATATTTCTTTA---GCA-------AAATCTATAAAGGATAGAAGTAG-------GTTGTGTtgtaaatttatgaaaa---atacaattttcagaac-tttttagATTTTGGAATTGTGGATAAGAGACTGTAGGCCAGgtagagtggctcacacctgtaatcccagcactttgggaggccgaggcaggtggattacctgaggtcaggagttcaagaccagcct i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18559859 1125 + 33263144 GAAGGGAATTCTGAGTGATACAAGATTACGTATAACCTTCCAAG--TCTATCAGATTAAGATTAAACACATACTACTCTGAGGTAGATACTAAGGAATCTCTCAATGAATTCAGA---AATATTTTGATTTGTGGATTTATCCACTTTCTTCAATATTTATTTTTCCTCTT--TCCCCCGCCCCCACATAGAAGTCTTCATTTCTTATTTTCATCTCTTTGAGGCTAACAGAGAAAAGAAGCAAAATAGGAAATTCAGTTTAGCACAgtaaagtttttgaaaatctgat--tcatggctgaaaatatctatttaaccatcccagtttaatgacagtttagctggtcacagaattctaggttgg--aaaaaagaatcccttcagaattttgaagataactctcaactgtcttctagcttttagccttgctgctgagaaatctgaaggcatgattcccatctccttgtatgtgtcttttttcttctttcttgcagcttgtaggactatccaaatacacctgatgttctaaaacggtgtcgatagtgatacgcctcagtgtggacttgtttcattttcatctattttgtggagaattctgtggtctctttcaagttggaaactaatgtcc-tcagtgctgggaagttttcttgtgtta-tcgggtgattattcccactccatacat------tttctttcttgaagcaatatta----ttggatcttctagaccggtcctctaattttcacatctcttctcttgtatttcccatctctgcctttttgctccatttttctaggatacaggttcttaatctcttatctgaaacctttggggccaaatgtgta-------tcagaatttttacaattttagaaagttaatatagaatat--atcccataatgtaatacccACCCCTCATCCCACCCACATACAATGAGACCTGAGGCAGTGATATTTCTTTA---GCA-------AAATCTATAAAGGATAGAAGTAG-------GTTGTATTGTaaacttatgaaaa---atataattttcagaac-tttttagattttggaattgtggataagagactgtAggccaggtagagcggctcacacctgtaatcccagcactttgggaggccaaggcaggtggattacctgaggtcaggagttgaagaccagcct i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198261924 1093 + 210400635 AAAGGGAATTCTGAGTGAT--AAGATTAAGTATAACTTTCCAAG--TCTATCAGATTAAGATTAAACACATACTACTCTGAGAGAGATACTAAGGAATCTCTTAATGAATTCAGA---AATATTTTTACTTATGAA-TTATCCATTTTCTTCAATATTTATTTTTCCTCTT--TCTCCC--------ATAGAAGTCTTCATTTCTTATTCTCATCTCTTTGAGGCTAACAGAGAAAAAAAGTGAAATAGAAAATTCAGTTTAGCACAgtaaattttttgagaatctgattataatgtctgaaaatacctagttaaccatcctactttaatgatagtttggctggtcacagaattctaggttgg-aaaaaaaaaatcccttca-------gaagataactctcaactgccttctagcttttagcctggttgctgagaaatctgaaggcatgattctcatctccctgta----actcttttcttctctcttgtagcttgtaggactatccaaatatgcccagtgttctaaaacagtatccatagtgatatgcctcagtgtggacttatttcattttcatctattttatggagaattctgtagtctctttcaagtagaaaatcaatgtcc-tcagtcctggaaagttttcttgagtta-tctggtgatgattcccactctacacattttatctttctttctggaagctttatta-----tggatcttctggactggtcctctaattttcttatctcttctcttgtatttcccatctctgccttttggctccatttttctgggatacaggtccttaatctcttaactgaaatctttggggccaaatgcaca-------tcagaatttttagaactttagaaaggtaatatagaataa--aacctataatgtaacacccACCCCTCATCCTACCCACATACCATGAGATCTGAGGCAGTGATATTTCTTTA---GC-----------------AATGACAGAAATAG-------GCTGTGTTGTAAACTTATGAAAA---ATATAACTTTCAGAAC-CT--------TTAGAAGTGTGGATAAGAGACTATAggctgggtgtagtggctcacatctgtaatcccagcactttgggaggccaaggcaggcggaccacctgaggtcaggagttcaaaaccagtct i calJac3.chr1 C 0 C 0 s canFam3.chr10 40882981 973 - 69331447 AAAGAGAGTTCTGGGCAATATGAGACAAAGTGTTACTTTCCAAGTCTCTCTCATAGCAACATTTAACATGTAATAT-------GAGATAATAAGGAATCTCTTGATAAATTCAGAAATAATATTTTGATTTATGGA-TTATCCATTTTCTTCAATACTTCTTTTTCCTTTTG-TTTCCTG---------AGATGACTTCATTTCTTATTTTCACCTCTGTGAGGCTGAATGGGAAGAA-----------GAAATTTAATTCAGCATAgtaaattttgtgagaatttgat--tcatgtctgaaaatgtctactaaatgaacccattttaatgatagtttgggt----atataattctaggttga-----aaaaaattcctttaga---------------------------------------------------------------atgttttccacc--------------------attctctct---ggtttgga-gactgtcc-aatgtgtccagtgttctaaaat----ttcctagcaatatgccttaatgtggg-----tttattttaatctattttgctggtaattctacagtctcttttaagttggaaattaatgtccttcagtcctgggaagctttcttgaattattttgttgatgattcccaccctacacatttggtctctctctccggaatttgtattagacattggatgttttggactggt-ctctaattttctaaactctt-tcttttatcttc--tctctggattttgacttgattttctggaaaaATGGGTGTTTaattccttatctgaaaactctggggcc-aatgtatatcagaattcagaatttttaggattttaggaaggtaataATGGGTGTAAAACCCATGATGTAACTCC------------------------ATCAGACTTGAGACAGTGATATTTCTTTATATGCATTCATATAAATGTGACAAAGATATATATAGGTTTtgagttttgctgccaacttatgaaaaatcatctgatgttcagaacatttttggattttagaattgtggataagagaccgtag----------------------------------acATTggggcacc----tgggtggctca-gtgggttgcagagttgagcatctgcct i canFam3.chr10 I 204 I 102 e mm10.chr15 77118980 3626 + 104043685 I a score=483995.000000 s hg38.chr22_KI270876v1_alt 110349 173 + 263666 ggccagcatggtgaaaccctgtttctactaaaaatagaaaaattagttgggcgtggtggtgcgcgcctgtaatcccagctacctgggaggctgaagcaggagaattgcttgaacccaggaggcagaggttgcaatgagctgagatcgcaccattgcactctagcctaggcca-c s panTro4.chr22 34488322 173 + 49737984 ggccagcatggtgaaaccctgtttctactaaaaatagaaaaattagttgggcgtggtggtgcgcgcctgtaatcccagctacctgggaggctgaagcaggagaactgcttgaacccaggaggcagagattgcaatgagctgagatcgcaccattgcactctagcctaggaca-c i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30904336 167 + 46535552 ggccaacatggtgaaaccctgtttctactaaaaatagaaaaatgagctgggcgtggtggtacgcgcctgtaatcccagctacttgg------gaagcaggagaattgcttaaacccaggaggcagaggttgcaatgagctgagatcgcaccactacactctagcctaggcca-c i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100456960 173 - 115148730 ggccaacacggtgaaaccctgtttctactaaaaatagaaaaattagctgggcgtggtggtgcacacctgtaatcccagttacttgggaagctgaagcaggagaattgcttgaacccaggaggcagaggttgcaatgagctgagatcgcaccattgcaccctagcctatgcca-c i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80607272 173 + 95678458 ggccaacatggtgaaaccctgtttccactaaaaatagaaaaatttgctgggcctggtggtgcacaccagtaatcccagctacttgggaggctgaagcaggagaatcgcttgaacccaggaggcagaggttgcaatgagctgagattgcaccactgcactctagcctaggctac- i rheMac3.chr10 C 0 I 7 s macFas5.chr10 81034099 171 - 96509753 ggccaacatggtgaaaccctgtttccact-aaaatagaaaaatttgctgggcctggtggtgcacaccagtaatcccagctacttgggaggctgaagcaggagaatcgcttgaacccaggaggcagaggttgcaatgagctgagattgcaccactgcactctagcctaggcca-- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76292238 172 + 90941950 ggccaacatggtgaaaccctgtttccactaaaaatagaaaaatttgctgggcgtggtggtgcacaccagtaatcccagctacttgggaggctgaagcaggagaatcgcttgaacccaggaggcagaggttgcaatgagctgagattgcaccactgcactctagcctaggcca-- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18560984 172 + 33263144 ggccaacatggtgaaaccctgtttccactaaaaatagaaaaatttgctgggcgtggtggtgcacaccagtaatcccagctatttgggaggctgaagcaggagaatcgcttgaacccaagaggcagaggttgcaatgagctgagattacaccattgcactctagcctaggcca-- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198263017 164 + 210400635 ggccaacatggtgaaaccccatctgtactaaaaata-caaaattagcctggtgtggtggtgcacacctg--------gctacttgggaggctgagtcaggagaatcgcttgaacccaggaggccaaggttgcaatgagctgagatcacgccactgcactctagcttaggcca-c i calJac3.chr1 C 0 C 0 e mm10.chr15 77118980 3626 + 104043685 I e canFam3.chr10 40883954 102 - 69331447 I a score=10622.000000 s hg38.chr22_KI270876v1_alt 110522 13 + 263666 agagcaagactcc s panTro4.chr22 34488495 13 + 49737984 agagcaagactcc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30904503 13 + 46535552 agagcaagactcc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100457133 13 - 115148730 agagcaagactcc i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81034270 2 - 96509753 -----------cC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76292410 2 + 90941950 -----------cc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18561156 2 + 33263144 -----------cc i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198263181 13 + 210400635 agagcgagactcc i calJac3.chr1 C 0 C 0 e mm10.chr15 77118980 3626 + 104043685 I e canFam3.chr10 40883954 102 - 69331447 I e rheMac3.chr10 80607445 7 + 95678458 I a score=11896.000000 s hg38.chr22_KI270876v1_alt 110535 5 + 263666 atctc s panTro4.chr22 34488508 5 + 49737984 atctc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30904516 5 + 46535552 atctc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100457146 5 - 115148730 atctc i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81034272 5 - 96509753 ATTCC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76292412 5 + 90941950 attcc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18561158 5 + 33263144 atttc i chlSab2.chr19 C 0 I 2 s calJac3.chr1 198263194 5 + 210400635 atctc i calJac3.chr1 C 0 I 11 s canFam3.chr10 40884056 5 - 69331447 atctt i canFam3.chr10 I 102 C 0 e mm10.chr15 77118980 3626 + 104043685 I e rheMac3.chr10 80607445 7 + 95678458 I a score=3647349.000000 s hg38.chr22_KI270876v1_alt 110540 1194 + 263666 -aaaaaaaaagaaaaaGATGTAGACCTTTattttttc-agtttcatcttcaagtcagccagat---aaagtttttcattttgttgccatgtttttaatttcaaggactcattttccttttctgaa--------------------actcaacccccatcccccaaactagcatttcattcctg---------------------------------------------------------tta-----atacaattt-----------------------------cttct--------------ctctctgagcatataaatgtaattgtgggg--------------gaaaggt-cc------------------tactccctgtaacgtggtgg--------tggtggttgttgttttg-------------------------gtttctttttgttatctatcttccaagttgtgggctttcct--ggtacctagtaatcattggttgtctattcaggacttaagagttgagggggtaggtggcaggtagctaaaaaatttgggaagtctgagtgggtggagtggaggcttgggggactttgtgattccttcattctaagtt-gttaggtaagcaatttgtt------------------------ctttaagtct----tcttg----agcaagtcaggttcttc--aaaaaagtcttccaatcttctaactgATGTCACCAGTTTCTG-AACTTTTGAAATTTTTGTGGTGTAAGTAAAATT-------------------------------AATCTCATGTA--------------------------------------------TTCAAAACTGGATCTAAT--------------------------------------------AGTAACTATTTAATAAAATCTTATAGTAC-----------TGTGTGTA------------------------CATGTTTTAATCAAGGCAGCAA----AATAGGGCAAC-----ATAGCCTATGCTTGTTTTGAGCTGACATGT-----ATATTCTAGGAAACATTGCTTGCTTTCAAAATAACTTTTATATTTCAAGTGAAGAAGGGCCTACGTTATAGTCATTCTCCAATGCAAACACAAAAGGTTAAGGGAGAATAAGCAGATGAAGTAGGAAATGAGATGTGGTTATCATCTAATGGCAAGTCCATAAATACAAA-ATTTTTTCCTTTTTCTGTTC-TTTAGAGCCTAGA---AGTACCTCAGATATAAGGTGAGGATTATTAAAATA-TTTGTGAtaaggagacatggcaactaactacagtatg------------ggattcagaatagagaaaa-agacattactggaaaaaatg--aaatttaaaataaggcctatattttacc-taatagcactatatcagtattCAGTATTTCTTATTGCCTAG-TTTCAAACattctactatag--------------ctatgtaagatgctaacattaggggaa-ctgggtgaagggtatgcagaaatcttctgca-tatttttgcaaatttactgtgaatctaaaataatttcataattaaaagtt s panTro4.chr22 34488513 1188 + 49737984 -aaaaaaaacgaaaaaGATGTAGACCTTTattttttc-agtttcatcttcaagtcagccaaat---aaagtttttcattttgttgccatgtttttaatttcaaggactcattttccttttctgaa--------------------actcaacccccatcccccaaactagcatttcattcctg---------------------------------------------------------tta-----atacaattt-----------------------------cttct--------------ctctctgagcatataaatgtaattgtgggg--------------gaaaggt-cc------------------tactccctgtaacgtggtgg--------tggtggttgctgttttg-------------------------gtttctttttgttatctatcttccaagttgtgggctttcct--ggtacctagtaatcattggttgtctattcaggacttaagagttgagggggtaggtggcaggtagctaaaaaa-ttgggaagtctgagtgggtagagtggaggcttgggtgactttgtgattccttcattctaagtt-gttaggtaagcaatttgtt------------------------ctttaagtct----tcttg----agcaagtcaggttcttc-aaaaaaagtcttccaatcttctaactgATGTCACCAGTTTCTG-AACTTTTGAAATTTTTGTGGTGTAAGTAAAATT-------------------------------AATCTCATGTA--------------------------------------------TTCAAAACTGGACCTAAT--------------------------------------------AGTAACTATTTAATAAAATCTTATAGTAC-----------TGTGTGTA------------------------CATGTTTTAATCAAGGCAGCAA----AATAGGGCAAC-----ATAGCCTATGCTTGTTTTGAGCTGACATGT-----ATATTCTAGGAAACATTGCTTGCTTTCAAAATAACTTTTATATTTCAAGTGAAGAAGGGCCTACGTTATAGTCATTCTCCAATGCAAACACAAAAGGTTAAGGGAGAATAAGCAGGTGAAGTAGGAAATGAGATGTGGTTATCATCTAATGGCAAGTCCATAAATACAGA-TTTTTTTCCTTTTTCTGTTCTTTTAGAGCCTAGA---AGTACCTCAGATATAAGGTGAGGATTATTAAAATA-TTTGTGAtaaggagacatggcaactaactacagtatg------------ggattcagaatagagaaaa-agacattactggaaaaaatg--gaatttaaaataaggcctatattttacc-taatagcactgta-------tcagtatttcttattgcctag-tttcgaacattctactatag--------------ctatgtaagatgctaacattaggggaa-ctgggtgaagggtatgcagaaatcttttgca-tatttttgcaaatttactgtgaatctaaaataatttcataattaaaagtt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30904521 1174 + 46535552 -aaaaaaaa-gaaaaaGATGTAGACCTTTATTTTTTC-AGTTTCATCTTCAAGTCAGCCAAAT---AAAGCTTTTCATTTTGTTGCCATGTT----ATTTCAAGGACTCATTTTCCTTTTCTGAA--------------------ACTCAACCCCCATCCCCCAAACtagcatttcattcctg---------------------------------------------------------tga-----atacaattt-----------------------------cttct--------------ctctctgaggatataaacgtaattgtgggg--------------gaagggt-cc------------------tactccctgtaacgtggtgg--------tggtggtggttgt------------------------------tttctttttgttatctatcttccatgttgtgggctttcct--ggtacctagtaatcattggttgtctattcaggacttaagagttgagagggtaggtggcaggtagctaaaaaa-ttgggaagtctgagtgggtggagtggaggctgggatgactttgtgattccttcattctaagtt-gttaggtaagcaatttgtt------------------------ctttaagtct----tcttg----agcaagtcaggttcttc--aaaaaagtcttccaatcttcAAACTGATGTCACCAGTTTCTG-AACTTTTGAAATTTTTGTGGTGTAAATAAAATT-------------------------------AACTTCACGTA--------------------------------------------TTCAAAACCGGATCTAAT--------------------------------------------AGTAACTATTTAATAAAATCTTATAGTAC-------------TGTGTA------------------------CATGTTTTAATCAAGGCAGCAA----AATAGGGCAAC-----ATAGCCTATGCTTGTTTTGAGCTGACATGT-----ATATTCTGGGAAACATTGCTTGCTTTCAAAATAACTTTTATATTTCAAGTGAAGAAGGGCCTACATTATAGTCATTCTCCAATGCAAACACAAAAGGTTAAGGCAGAATAAGCAGATGAAGTAGGAAATGAGATGTGGTTATCATCTAATGGCAAGTCCATAAATATAAA-ATTTTTTCCTTTTTCTGTTC-TTTAGAGCCTAGA---AGTACCTCAGATATAAGGTGAGGATTATTAAAATA-TTTGTGAtaaggagacatggcaactaactacagtatg------------ggattcagaatagagaaaa-agacattactggaaaaaatg--aaatttaaaataaggcctatattttacc-taatagcactgta-------tcagtatttcttattgcctag-tttcgaacattctactatag--------------ctacgtaagatgctaacattaggggaa-ctgagtgaagggtatgcagaaatcttttgca-tatttttgcaaatttactgtaaatctgaaataagttcataattaaaagtt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100457151 1189 - 115148730 -aaaaaaaaagaaaaaGATGTAAACCTTTATTTTTTC-AGTTTCATCTTCAAGTCAGCCAAATAAAAAAGTttttcattttgttgccatgtttttaatttcaaggactcattttccttttctgaa--------------------actcaacccccatcccccaaactagcatttcattccgg---------------------------------------------------------tta-----atacaattt-----------------------------cttct--------------ctctctgaggatataaatgtaattgtgggg--------------gaagggt-cc------------------tactccctgtaacgtggtgg--------tgtttgttgttgttttg-------------------------gtttgtttttgttatctatcttccatgttgtgggctttcct--ggtacctagtaatcactggttgtctattcgggacttaagagttgagggggtaggtggcaggtagctaaaaaa-ttgggaagtctgagtgcgtggagtggaggcttggatgactttatgattccttcattctaagtt-gttaggtaagcaatttgtt------------------------ctttaagtct----tcttg----aacaagtcaggttcttc--aaaaaagtcttccaatcttctAAATGATGTCACCAGTTTCTG-AACTTTTGAAATTTTTGTGGTGTAAGTAAAATT-------------------------------AACTTCATGTA--------------------------------------------TTCAAAACTGGATCTAAT--------------------------------------------AGTAACTATTTAATAAAATCTTATAGTAC-----------TGTGTGTA------------------------CATGTTTTAATCAAGGCAACAA----AATAGGGCAAC-----AGAGCCTATGCTTGTTTTGAGCTGACATGT-----ATATTCTGGGAAACATTGCTTGCTTTCAAAATAACTTTTGTATTTCAAGTGAAGAAGGGCCTATGTTATAGTCATTCTCCAATGCAAACACAAAAGGTTAAGGCAGAATAAGCAGATGAAGTAGGAAATGAGATGTGGTTATCATCTAATGGCAAGTCCATAAATACAAA-ATTTTTTCCTTTTTCTGTTC-TTTAGAGCCTAGA---AGTACCTCAGATATAAGGTGAAGATTATTGAAATA-TTTGTGAtaagcagacatggcaactaactacagtatg------------ggattcagaatagagaaaa-agacattaccggaaaaaatg--aaatttaaaataaggcctctactttacc-taatagcactgta-------tcagtatttcttattgcctag-tttcgaacattctactatag--------------ctatgtaagatgctaacattaggggaa-ctgggtgaagggtatgcagaaaacttttgca-tatttttgcaaatttactgtaaatctaaaataatttcataattaaaagtt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80607452 1197 + 95678458 -aaaaaaaaaaaaaaaGATGTAGACCTTTattttttt-aatttcatcttcaagtcagccaaat---aaagtttttcattttgttgccatgtctttaatttcaatgactcattttccttttctgaa--------------------actcaacccccatcccccaaactagcatttcattcctg---------------------------------------------------------tta-----atacaattt-----------------------------ct------------------tctctgaggatgtaaatgtaattgtgggg--------------gaagggtccc------------------tactccctgcaacgtggtgg--------tggtggtggttgttttg-------------------------gtttgtttttgttatctatcttccatgttatgggttttcgt--ggtacccagtaatcactgattgtctattcaggacttaagagttgagggggtaggtggcaggtagctaaaaaa-ttggcaagtctgagtgggtggagtggaggcttcgatgactttgtgattccctcattctaagtt-gttgggtaagcaatttgtt------------------------ctttaagtct----tcttg----agcaagcgaggttctccaaaaaaaagtcttccaatcttctaactgATGCCACCAGTTTCTG-AACTTTTGAAATTTTTGTGGTATGAGTAAAATT-------------------------------AACTTCATGTA--------------------------------------------TTCAAAACTGTAACTAAT--------------------------------------------AGTAAGTATTTAATAAAACCTTGTAGTAC-----------TGTGTGTG------------------------CATGTTTTAATCAAGGCAGCAA----AATAGGGTCAC-----ACAGCCTATGCTTGTTTGGAGCTGACATGT-----ATATTCTGGGAAACACTGCTTGCTTTCAAAATAACCTTTATATTTCAAGTGAAGAAGAGCCTACGTTATAGTCATTCTCCAAAGCAAACACAGAAGGTTAAGGCAGAATAAGCAGATGAAGCAGTAAATGAGATGTGGTTATCATCTAAAGGCAAGTTCAT-AATCCAAA-TTTTTTTCCTTTTTCTGTTC-TTTACAGCCTAGA---AGTACCTCAGATACAAGGTGAGGATTATTAAAATA-TTTGTGAtaaggagacatagcaactaactgcagtatg------------ggattcagaatagagaaaa-agacattactgaaaaaaacg--aaatttaaaataaggcctatactttacc-taatagtactgta-------tcagtctttctttttgcctga-ttttgaaaattctactatagaatctatacatctactatgtaagatgctaacatta-gggaa-cttggtgaagggtatgcagaaaccttttgca-tatttttgcaactttactgttaatctaaaataatttcataattaaaagtt i rheMac3.chr10 I 7 C 0 s macFas5.chr10 81034277 1195 - 96509753 ---AAAAAAAAAAAAAGATGTAGACCTTTATTTTTTA-AATTTCATCTTCAAGTCAGCCAAAT---AAAGTTTTTCATTTTGTTGCCATGTCTTTAATTTCAATGACTCATTTTCCTTTTCTGAA--------------------ACTCAACCCCCATCCCCCAAACTAGCATTTCATTCCTG---------------------------------------------------------TTA-----ATACAATTT-----------------------------TT------------------TCTCTGAGGATGTAAATGTAATTGTGGGG--------------GAAGGGTCCC------------------TACTCCCTGCAACGTGGTGG--------TGGTGGTGGttgttttg-------------------------gtttgtttttgttatctatcttccatgttatgggttttcgt--ggtacccagtaatcactgattgtctattcaggacttaagagttgagggggtaggtggcaggtagctaaaaaa-ttggcaagtctgagtgggtggagtggaggcttcgatgactttgtgattccctcattctaagtt-gttgggtaagcaatttgtt------------------------ctttaagtct----tcttg----agcaagcgaggttctccaaaaaaaagtcttccaatcttctaactgATGCCACCAGTTTCTG-AACTTTTGAAATTTTTGTGGTATGAGTAAAATT-------------------------------AACTTCATGTA--------------------------------------------TTCAAAACTGTAACTAAT--------------------------------------------AGTAAGTATTTAATAAAACCTTATAGTAC-----------TGTGTGTG------------------------CATGTTTTAATCAAGGCAGCAA----AATAGGGTCAC-----ACAGCCTATGCTTGTTTGGAGCTGACATGT-----ATATTCTGGGAAACACTGCTTGCTTTCAAAATAACCTTTATATTTCAAGTGAAGAAGAGCCTACGTTATAGTCATTCTCCAAAGCAAACACAGAAGGTTAAGGCAGAATAAGCAGATGAAGCAGTAAATGAGATGTGGTTATCATCTAAAGGCAAGTTCAT-AATCCAAA-TTCTTTTCCTTTTTCTGTTC-TTTACAGCCTAGA---AGTACCTCAGATACAAGGTGAGGATTCTTAAAATA-TTTGTGAtaaggagacatagcaactaaccacagtatg------------ggattcagaatagagaaaa-agacattactgaaaaaaacg--aaatttaaaataaggcctatactttacc-taatagtactgta-------tcagtctttctttttgcctga-ttttgaaaattctactatagaatctatacatctactatgtaagatgctaacatta-gggaa-cttggtgaagggtatgcagaaaccttttgca-tatttttgcaactttactgttaatctaaaataatttcataattaaaagtt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76292417 1195 + 90941950 ---aaaaaaaaaaaaagatgtagacctttattttttt-aatttcatcttcaaGTCAGCCAaat---aaagtttttcattttgttgccaTGTCTTTAATTTCAAtgactcattttccttttctgaa--------------------actcAACCCCCATCCCCCAAACTAGCATTTCATTCCTG---------------------------------------------------------TTA-----ATACAATTT-----------------------------CT------------------TCTCTGAGGATGTAAATGTAATTGTGGGG--------------GAAGGGTCCC------------------TACTCCCTGcaatgtggtgg--------tggtggtggttgttttg-------------------------gtttgtttttgttatctATCTTCCATGTTACGGGTTTTCGT--GGTACCCAGTAATCACTGATTGTCTATTCAGGACTTAAGAGTTGAGGGGGTAGGTGGCAGGTAGCTAAAAAA-TTGGCAAGTCTGAGTGGGTGGAGTGGAGGCTTCGATGACTTTGTGATTCCTTCATTCTAAGTT-GTTAGGTAAGCAATTTGTT------------------------CTTTAAGTCT----TCTTG----AGCAAGCGAGGTTCTCCaaaaaaaaGTCTTCCAATCTTCTAACTGATGCCACCAGTTTCTg-aacttttgaaatttttgtggTATGAGTAAAATT-------------------------------AACTTCATGTA--------------------------------------------TTAAAAACTGTAACTAAT--------------------------------------------AGTAACtatttaataaaaccttatagtac-----------tgtgtgtg------------------------catgttttaaTCAAGGCAGCAA----AATAGGGTCAC-----ACAGCCTATGCTTGTTTGGAGCTGACATGT-----ATATTCTGGGAAACACTGCTTGCTTTCAAAATAACCTTTATATTTCAAGTGAAGAAGAGCCTACGTTATAGTCATTCTCCAAAGCAAACACAGAAGGTTAAGGCAGAATAAGCAGATGAAGCAGTAAATGAGATGTGGTGATCATCTAAAGGCAAGTTcat-aatacaaa-tttttttcctttttctgttc-cttaCAGCCTAGA---AGTACCTCAGATACAAGGTGaggattattaaaata-tttgtgataaGGAGACATAGCAACTAACTACAGTATG------------GGATTCAGAATAGAGAAAA-AGAcattactgaaaaaaatg--aaatttaaaataaggcCTATACTTTACC-TAATAGTACTGTA-------TCAGTCTCTCTTTTTGCCTGA-TTTTGAAAATTCTACTATAGAAtctatacatctactatgtaagATGCTAACATTA-GGGAA-CTTGGTGAAGGGTATGCAGAAACCTTTTGCA-TATTTTTGCAACTTTACTGttaatctaaaataatttcataattaaaagtt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18561165 1194 + 33263144 -aaaaaaaaaaaaaaaGACGTAGACCTTTattttttt-aatttcatcttcaagtcagccaaat---aaagtttttcattttgttgccatgtctttaatttcagtgactcattttccttttctgaa--------------------actcaacccccatcccccaaactaccatttcattcctg---------------------------------------------------------tta-----atacaattt-----------------------------ct------------------tctctgaggatgtaaatgtaattgtgggg--------------gaagggtccc------------------tactccctgtaacgtggtgg--------tggtggtggttgttttg-------------------------gtttgtttttgttacctatcttccatgttacgggttttcct--ggtacccagtaatcactgattgtctattcaggacttaagagttgagggggtaggtggcaggtagctaaaaaa-ttggcaagtctgagtgggtggagtggaggcttcgatgactttgtgactccttcattctaagtt-gttaggtaagcgatttgtt------------------------ctttaagtct----tcttg----agcaagtgaggttctccaaaaaaacgtcttccaatcttctaactgATGTCACCAGTTTCTG-AACTTTTGAAATTTTTGTGGTATGAGTAAAATT-------------------------------AACTTCATGTA--------------------------------------------TTCAAAACTGGAACTAAT--------------------------------------------AGTAACTATTTAATAAAATCTGATAGTAC-----------TGTGTGTG------------------------CATGTTTTAATCAAGGCAGCAA----AATAGGGTAAC-----ACAGCCTATGCTTGTTTTGAGCTGACGTGT-----ATATTCTGCGAAACACTGCTTGCTTTCAAAATAACCTTTATATTTCAAGTGAAGAAGAGCCTACGTTATAGTCATTCTCCAATGCAAACACAGAAGGTTAAGGCAGAATAAGCA---GAAGTAGGAAATGAGATGTGGTTATCATCTAAAGGCAAGTTCATAAATACAAATTTTTTTTCCTTTTTCTGTTC-TTTACAGCCTAGA---AGTACCTCAGACATAAGGTAAGGATTATTAAAATA-TTTGTGAtaaggagacatagcaactaactacagtatg------------ggattc--aatagagaaaa-agacattactgaaaaagaag--aaatttaaaataaggcctatactttacc-taatagtactgta-------tcagtctttcttattgcctga-ttttgaaaattctactatagaatctatacatctactatgtaagatgctaacatta-gggaa-cttggtgaagggtatgcagaaaccttttgca-tatttttgcaactttactgtaaatctaaaataatttcataattaaaagtt i chlSab2.chr19 I 2 C 0 s calJac3.chr1 198263210 1175 + 210400635 -aaaaaaaaaaaGAGAGATGTAGGCCTCCatttcttcaaatttcatcttcaagtcagtcaaat---aaaggttttcattctgttgccatattttcaacttcaaggactcactttccttttctgaa--------------------attcaacccccatcccccaaactagcatttcattattg---------------------------------------------------------ttaagttgatacaattt-----------------------------cttat--------------ctctctgaggatatatatgtagttgggggg--------------aaaggct-cc------------------tcctccccctaaggttgttc--------ttgttgttgttgttttg-------------------------gtttgtttttgttatctatcttccttgctgtaagctttcct--ggtacctagaaatcactggttggctaatcagaacttaacagttgagggggtaggtgacaggaagtaaaaaaa-ctgggaagtctgaatgggtggagaggaagctttgatgactc--tgattcattcattctaagtt-gtcaggtaagcaacttgtt------------------------c---aagtct----tc-------agcaagtcaggttcccc--aaaaaagtcttccaatcttccaactgatggCACCGGTTTCTG-AACTTTTGAAATTTTTGTTGTGTAAGGAGAATT-------------------------------AACTTCATATA--------------------------------------------TTCAAAATTGGAACTAA-----------------------------------------------TAAGTATTTAATAACATCTTATAGTAC-----------TGTGTATA------------------------CGTGTTTTAATAAAGGCAGCAA----TGTAGGGCAAC-----ATAGCCCATGCTTGT-------TGACATGT-----GTATTTTGGGAAACGCTGCTTGCTTTCAAAATAACCTTCATATTTCAAGTGAAAAAGAGCCTACTTTATAGTCCTCCTCCAATGCAAACATGAGAGGCTAAGTTAGAATAAGCAGATGAAGTAGGAAATGAGATGTGGTTATCATCTAATGGCAAGTCCATACATACAAAATTTTCTTCCTTTTTCTGATC-TTTAGAGCCTAGA---ACTACTTCAGATACAAGTTGGGGATTATTGAAATA-TTTGTGAtaaggagacatggcaactaactacagtatg------------agattcagaatagagaaaa-agatattatcgggaaaaatg--aaatttaaaataaggtttatactttacc-taatagcactcta-------tcagtattgcttattgcctgg-ttttgaaaattctactatag--------------ctatgttagatgctaacaccaagggaa-ctgggtgaagggtatgcaaaaattttttgca-tatttttgcaactttactgaaaatctaaagtaatttcaaaattaaaagtt i calJac3.chr1 I 11 C 0 s canFam3.chr10 40884061 1570 - 69331447 ttaaaaaaaGAGAGAGGCTGCAGACCTCTACCtcttc-aatctcatccttcagccttcccaca---aagttttttcattttgttgccatatttttaatttcaagg-ttcatttttcttctctgaatCCAGCAGTCTTTTAAAAAGACTGAATCCACCCCTTTTAA---AAAATTTCATTcctggggttcagtggttgagcatctgcctttggctcaggtcgagatcccggggtcctggaatca-----agaccagttaccaggctccttgctcggtggggagcctgcttctcactctgtctctgcctctctgtgtctcccaatgaataagtgaaAACAAACAAACAAACAAAAACT-TCATTCTTGTTTATTAGATGTAATCTCTTTAAGGCTATGGATTATCATTTTTGGTAGTTTTTTCGAAGAAAaagtttccttttattcccaatttctttttgttctctatcttgtatgttgtaggtttccctcaggaatctaactatccttggctgtctgcttacaa-tgaagaattaagtgg----------ggtagctaagaaa-ctggtagttctgaatgggtgggttggagggcatgaggactttg------ccttattccagttcagtgaggtaagcagtttgttggagagacccctaacatgtccatcttccaagtctttcctcttgagtcagtcagccaggctctcc---agagaattttcccatcttctacctggggctgtcagtttctgaaacttctaaaatttttgtagtgtaaatagaattatttctcagatttctctcacaactggcttagaagtttgtgtaggtctgctaagcttgtcactaattgggacatctgctttccagcttccaaaatt---actaattctcctgttcttattggtttatagccctaaaaacatacaaacacaaaaaccacttactgcatttttagaggaagcaaaaatagatgggtgtattcaaAAGTAATCTGGAACTAATTCATG-TTTGATAAAATCTTCAAATACAATATGTACACATGTAACAGCTCATGTGTGTTTTGAGCTAACAGGTATAAAATATTTTGGCAAATATTGCTTGCTTTCAAAATAACCTTTGTATCTCAA--GAATGAGAGCCTTCAATACTTCCCTCAGCCAATGCACACATAAAAGGCTGCGGTGGAATAAGCAGA-GACCTCGAAGATGAGACATGGTTATCACCTAACAGCAAGTCTATTAATACAAA-GTTTTTTCCTTTCTCTGTTC-TTCAGAAGGTGGAATTACTACTCCAGATATAAGCTGAAGATGATTAAAATATTTTGgaataaggagacatgacaactaactgcaacgtggaatcctgaattggatttagaacagaaaaaagggacattagtggaaaaactggtaaaatttgaataaggtctatattttgccttactagtattgta-------ccaacacttcctactgcctggcttttgaaaactgtaccatat--------------ctatgtaaagtattgacataaggggaagttaagtgaaggagatacagaaattttttgtactatttttgccactttcctgtaagtctaagtttatttcaaaataaaacatt i canFam3.chr10 C 0 C 0 e mm10.chr15 77118980 3626 + 104043685 I a score=1482297.000000 s hg38.chr22_KI270876v1_alt 111734 651 + 263666 tTggctgggtgcaatggctcacacccaggctggctttaattccagcactctaggaggcccaggagttcgagaccagcctgaacaaccctggtgaaaccctatctctacaaaaaatacaaaaattagccaggaatgatggcgtaagcctgtactcccagctacttgggaggctgaggtgggaggatcaattgagcatgagaggtcaaggctgcagtgagctatgatcatatcactgcactcctgcctgggcgacaaggcaagaccctgtctcaaaacaaaaaacaaaCACACACACACACAAA--------------AAaagcaagca-aggaaacaagcaa---------------------------gctagaaaAAAAA----------------------TTACAAGTTTT-AAAAAAGAAAAAAGTAggcctggcgcagtggctcatgcctgtaatcctagcactttgggaggccgaggtgggtggat------------------------------tacctgaggtcaagagttcgagaccagcctggccaacatggtgaaacctcgtctccacta------------------------------------------------------------aaaatacaaaaattagccaggcgtggtggcgggtgcttgtaatcccagct--------------------------------------------------acttgggagactgaggcaggagaatcacttgaacccaggagatggaggttgcagtgagccgagatcgcaccattgcactccagcctgggcaacagagcaaaaactctgtctc-----aa s panTro4.chr22 34489701 663 + 49737984 TTggctgggtgcaatggctcacacccaggctggctttaatcccagcactctaggaggcccaggagtttgagaccagcctgaacaaccctggtgaaaccctgtctctacaaaaaatacaaaaattagccaggaatgatggtgtaagcctgtactcccagctacttgggaggctgaggtggaaggatcaattgagcatgagaggtcaaggctgcagtgagctatgatcataccactgcactcctgcctgggcgacagggcaagaccctgtctcaaaacaaaaaaaaaaaacattaaaaaaaaaaaaaaagaaaaaaagaaaagaaagca-aggaagcaagcaa---------------------------acaagaaaaaaaA----------------------TTACAAGTTTT-AAAAAAGAAAAAAGTAggcctggcgcagtggctcatgcctgtaatcctagcactttgggaggccgaggtgggtggat------------------------------tacctgaggtcaagagttcgagaccagcctggccaacatggtgaaacctcgtctccacta------------------------------------------------------------aaaatacaaaaattagccaggcgtggtggcgggtgcttgcaatcccagct--------------------------------------------------acttgggagactgaggcaggagaatcacttgaacccaggagatggaggttgcagtgagccgagatcgcaccattgcactccagcctgggcaacagagcaaaaactctgtctc------- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30905695 634 + 46535552 TTggctggatgcaatggctcacacccaggctggctttaatcccagcactctaggaggcccaggagttcgagaccagcctgaacaa-aatggtgaaaccctgtctctacaaaaactacaaaaattagctaggaatgatggcataagcctgtactcccagctacttgggaggctgaggtgggaggatcaattgagcatgagcggtcaaggctgcagtgagct------ataccactgcactcctgcctgggcgacagggcaagaccctgtctcaaaaaaaaaaaaaaa---------aaagaaa--------------gcaagaaagca-aggaagcaagcaa---------------------------gcaagaaaAAAAA----------------------TTACAAGTTTTAAAAAAAGAAAAAAGTAggcctggcgcagtggctcatgcctgtaatcctagcactttgggaggccgaggtgggtggat------------------------------tacctgaggtcaagagtttgagaccagcctggccaacatcgtgaaacctcgtctccacta------------------------------------------------------------aaaatacaaaaattagccaggcgtggtggcgggtgcttgtaatcccagct--------------------------------------------------acttgggagactgaggcaggagaatcgcttgaacccaggagatggaggttgcagtgagccgagatcgcaccattgcactccagcctgggcaacagagcaaaaactctgtctc------- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100458340 630 - 115148730 CTggctgggtgcaatggctcacacccaggctggctttaatcccagcactctaggaggcccaggagtttgagaccagcctgaacaa-catggtgaaaccctgtctctacaaaaaatacaaaaattagccaggaatgatggcgtaagcctgtactcccagctacttgggaggctgaggtgggaggatcaattgagcataagaggtcaaggctgcagtgagctatgatcataccactgcactcctgcccaggcgacagggcaagaacctgtctcaaaaaaaaaaaacaa---------caaaaaa-----------------------ca-agaaaGCAAGCAA---------------------------GCAAGCAAAAAAA----------------------TTACAAGTTTT-AAAAAAGAAAAAAGTAggcctggcgcagtggctcatgcctgtaatcctagcactttgggaggccgaggtgggtggat------------------------------tacctgaggtcaagagttcgagaccagcctggccaacatggtgaaaccttgtctccatta------------------------------------------------------------aaaatacaaaaattagccaggcatggtggcgggtgcttgtaatcccagct--------------------------------------------------acttgggagactgaggcagaagaatcgcttgaacccaggagatggaggttgcagtgagccgagatcgcgccattgcactccagcctgggcaacagagcaaaaactctgtctc------- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80608649 632 + 95678458 TTggttggatgcaatggctcacac---------ctttaatcccagcactccaggaggccctagagttcgagaccagcctcagcaa-catggtgaaaccttgtctctacaaaaagcacaaaaattagccaggagtgatggcacaagcctgtactcccagctgcttgggaggttgaggtgggaggatcaattgagcctgagaggtcaaggctgcagtgagctacaatcatgccactgcactcctgccagggtgacagggcgagaccctgtctccaaaaaaaaaaaaaa---------aaaaaaa--------------GAGGGAAAGAA----AAGCAAGCAA---------------------------GCAAGCAAAAAAA---------------------TTTACAAGTTTT-AAAAAAGAAAAAAGTAggcctggcacggtggctcatgcttgtaatcctagcactttgggaggccaaggtggatggatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn------------------------------------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn--------------------------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn-------------------------------aacccaagagatggaggttgcagtgagccgagatagtgccattgcaccccagcctgggcaacagagcaaaaa--ctgtctccaaaaaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81035472 623 - 96509753 TTggttggatgcaatggctcacac---------ctttaatcccagcactccaggaggccctagagtttgagaccagcctcagcaa-catggtgaaaccttgtctctacaaaaagcacaaaaattagccaggagtgatggcacaagcctgtactcccagctgcttgggaggttgaggtgggaggatcaattgagcctgagaggtcaaggctgcagtgagctacaatcatgccactgcactcctgccagggtgacagggcaagaccctgtctcc-aaaaaaaaaaaaa---------aaaaaaa--------------GAGGGAAAGAA--------AAGCAA---------------------------GCAAGCAAAAAAA---------------------TTTACAAGTTTT-AAAAAAGAAAAAAGTAggcctggcacagtggctcacgcttgtaatcctagcactttgggaggccaaggtagatggat------------------------------tacctgaagtcaagagttcgagaccgctctggccaacatggtgaaatctcgtctccacta------------------------------------------------------------aaaatacaaaaattagccaggcgtggtggcaggtgcttgtaatcccagct--------------------------------------------------acttgggagactgaggcaggagaatctcttgaacccaggagatggaggttgcagtgagccgagatagtgccattgcaccccagcctgggcaacagagcaaaaa--ctgtctc-----aa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76293612 626 + 90941950 ttggttgggtgcaatggctcacac---------ctttaatcccagcactccaggaggccctagagttcgagaccagcctcagcaa-catggtgaaaccttgtctctacaaaaagcacaaaaattagccaggagtgatggcacaagcctgtactcccagctgcttgggaggctgaggtgggaggatcaattgagcctgagaggtcaaggctgcagtgagctacaatcatgccactgcactcctgccggggtgacagggcgagaccctgtctcc----aaaaaaaaaa---------aaaaaaa--------------gagggaaagaaaagcaagcaagcaa---------------------------gcaagcaaaaaaa---------------------tttacaagtttt-aaaaaagaaaaaagtaggcctggcacagtggctcacgcttgtaatcctagcactttgggaggccaaggtggatggat------------------------------tacctgaagtcaagagttcgagaccgctctggccaacatggtgaaatctcgtctccacta------------------------------------------------------------aaaatacaaaaattagccaggcgtggtggcaggtgcttgtaatcccagct--------------------------------------------------acttgggagactgaggcaggagaatctcttgaacccaggagatggaggttgcagtgagccgagatagtgccattgcaccccagcctgggcaacagagcaaaaa--ctgtctc------- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18562359 628 + 33263144 TTggctggatgcaatggctcacac---------ctttaatcccagcactctaggaggcccaagagttcgagaccagcctcagcag-catggtgaaaccttgtctctgcaaaaagcacaaaaattagccaggagtgatggcacaagcctgtactcccagctgcttgggaggctgaggtgggaggatcaattgagcctgagaggtcaaggttgcagtgagctacaatcatgccactgcactcctaccagggtgacagggtgagaccctgtctgaaaaaaaaaaaaaaa---------aaaaaga--------------gagagaaaGAA----AAGCAAGCAA---------------------------GCAAGTAAAAAAA---------------------TTTACAAGTTTT-AAAAAAGAAAAAAGTAggcctggcacagtggcgcgcgcctgtaatcctagcactttgggaggccaaggtggatggat------------------------------tacctgaggtcaagagttcgagaccagcctggccaacatggtgaaatctcatctccacta------------------------------------------------------------aaaatacaaaaattagccaggcgtggcggcaggtgcttgtaatcccagct--------------------------------------------------acttgggagattgaggcaggagaatctcttgaacccaggagacggaggttgcagtgagccgagatagcgccattgcactccagcctgggcaacagagcaaaaa--ctgtctc-----aa i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198264385 602 + 210400635 TTggctgggtacaaaggctcacac---------ctttaatctcagctctctgggagacctaggtgttcgacaccagcctgggcaa-catggcaaaaccctatctctacaaaaaatacaaaaattagccaggtgtgatggcgcatgcctgtattcccagctacttgggaggctgaggtgggaggatcaattgagcctgagaggtaaagggtatagtgagctatgatca-----------------cAGGGTGACACCCTAAGA----------AAGAAAGAAGAGAA---------Gagggaa--------------gggggaaggga-agggggaagggaatggggaagaaaagggaagagggaaggggcaaggggaaaaggggaagagggaagggaagggAGTTGTAAGTTTT-AAAAAAGAAAAAAGTAGTccaggcatggtggctcatgcctgtaatcccaatactttgggaggcctaagtgggtggat------------------------------cacctgaggtcacgagttcaagaccagcctgaccaacatggtgaaacctcatctccccta------------------------------------------------------------aaaatataaaaattagccacctgtggtggtgggcatttgtaatcccagct--------------------------------------------------actagggaggctgaggcaggagaatcgcttgaacccaggaggtgaaggctgcagtcagccA--------------------------------------------------C------- i calJac3.chr1 C 0 C 0 e mm10.chr15 77118980 3626 + 104043685 I e canFam3.chr10 40885631 0 - 69331447 C a score=1321219.000000 s hg38.chr22_KI270876v1_alt 112385 437 + 263666 aaaaaaaaaaaagaagaaaaTATTTTAGGATGTCAGGTTCTAAACCCTTA--AATATTAAAACACT-----------AAAAATGTT---TAACTGGTTTAATGATTATATACAGGCACGAGTGTAAACAAATATTTATGTTTTGTATTCAAAATGT-GATTGGAACTCTTATGAAACTTAGAAAGAGACTG-AAAGTACATTCATTTCAAATTATTGGTTTGATGAAG----AAAAAAA--CCCACATTTAAATCTAACATTACTATTAATCCATTTCACAATTAGAAACAGTTTAACTTGTAACTCTCATTATTTTACATAC-AAAAAACCAATCATATAAAGCTTCATCTCCTACTGCACTCTCTCTGAAGACATTACAGTTTTAAGAACAAAAATATCAATCACTCCTGGTTGGGCTCCATTTATTTCGAATGGGAGG--------GGGTGGTGATCTTCAGATAAG s panTro4.chr22 34490364 435 + 49737984 --aaaaaaaaaagaagaaaaTATTTTAGGATGTCAGGTTCTAAACCCTTA--AATATTAAAACACT-----------AAAAATGTT---TAACTGGTTTATTGATTATATACAGGCACGAGTGTAAACAAATATTTATGTTTTGTATTCAAAATGT-GATTGGAACTCTTACGAAACTTAGAAAGAGACTG-AAAGTACATTCATTTCAAATTATTGGTTTGATGAAG----AAAAAAA--CCCACATTTAAATCTAACATTACTATTAATCCATTTCACAATTAGAAACAGTTTAACTTGTAACTCTCATGATTTTACATAC-AAAAAACCAATCACATAAAGCTTCATCTCCTACTGCACTCTCTCTGAAGACCTTACAGTTTTAAGAACAAAAATATCAATCACTCCTGGTTGGGCTCCATTTATTTCGAATGGGAGG--------GGGTGGTGATCTTCAGATAAC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30906329 432 + 46535552 -aaaaaaaaaaagaagaaaaTATTTTAGGATGTCAGATTCTAAACTCTTA--AATATTAAAACGCT-----------AAAAATGTG---TAACTGGTTTAATGATTATATACAGGCACAAGTGTAAACAAATATTTATG-TTTGTATTCAAAATGT-GATTGGAACTCTTATGAAACTTAGAAAGAGACTG-AAAGTACATTCATTTCAAATTATTGGTTTGATGA------CAGAAAA--CCCACATTTAAATCTAACATTACTATTAATTCATTTCACAATTAGAAACGGTTTAACTTGTAACTCTCATGATTTTACATAC-AAAAAACCAATCATATAAAGCTTCATCTCCTACTGCACTCTCTCTGAAGACCTTACGGTTTTAAGAACAAAAATATCAATCACTCCTGGTTGGGCTCCATTTATTTCGAATGGG-GG--------GGATGGTGATCTTCAGATAAG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100458970 445 - 115148730 -aaaaaaaaaaagaagaaaaCATTTTAGGATGTCAGATTCTAAACCCTTA--AATATTAAAACACT-----------AAAAATGTT---TAACTGGTTTAATGATTATATACAGGCACAAGTGTAAACAAATATTTATG-TTTGTATTCAAAATGT-GATTGGAACTCTTATGAAACTTAGAAAGAGACTG-AAAGTACATTCATTTCAAATTATTGGTTTGATGAAA----AAAAAAAACCCCACATTTAAATCTAACATTACCATTAATCCATTTCACAATTAGAAACAGTTTAACTTGTAACTGTCATGATTTTAAGTAC-AAAAAACCAATCATATAAAGCTTCATCTCCTACTGCACTCTCTCTGAAGACCTTACGGTTTTAAGAACAAAAATATCAATCACTCCTGGTTGGGCTCCATTTATTTCGAATGGGGGGAGGGGGGCGGGTGGTGATCTTCAGATAAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80609281 437 + 95678458 aaaaaaaagaaaaAAGAAAATATTTTAGGATGTCAGATTCTAAACCCTTA--AATATTAAAAAATCTAAACCCTTAAAAGAATGTT---TAACTGATTTAATGATTATATACAGGCACAAGTGTAAACAAATATT--TG-CTTGTATTCAAAATGT-GATTGGAACTCTTATGAAACTTAGAGACTGA----AAAGTACATTCATTTCCAATTATTGGTTTGATGAAG----AAAAAAA--CCCATATTTAAATCTAACATTACCATTAATCCATTTCACAATTAGAAACAGTTTAACTTGTAACTCTCATGATTTTACATAC-AAAAAAAAAATCATATAAAGCTTCATCTCCTACTGCATTCTCTCTGAAGACCTTATAGTTTTAAAAACAAAAATATCAATCACTCCTGGTTGGGCTCAATTTATTTTGGATGGGGGG-------------GTGATTTTCAGATAAG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81036095 436 - 96509753 aaaaaaaaaaaaaaagaaaaTATTTTAGGATGTCAGATTCTAAACCCTTA--AATATTAAAAAATCTAAACCCTTAAAAGAATGTT---TAACTGATTTAATGATTATATACAGGCACAAGTGTAAACAAATATT--TG-CTTGTATTCAAAATGT-GATTGGAACTCTTATGAAACTTAGAGACTGA----AAAGTACATTCATTTCCAATTATTGGTTTGATGAAG----AAAAAAA--CCCATATTTAAATCTAACATTACCATTAATCCATTTCACAATTAGAAACAGTTTAACTTGTAACTCTCATGATTTTACATAC--AAAAAAAAATCATATAAAGCTTCATCTCCTACTGCATTCTCTCTGAAGACCTTATAGTTTTAAAAACAAAAATATCAATCACTCCTGGTTGGGCTCAATTTATTTTGAATGGGGGG-------------GTGATTTTCAGATAAG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76294238 437 + 90941950 -caaaaaaaaaaaaggaaaatattttaggatGTCGGATTCTAAAccctta--aatattaaaaaatctaaacCCTTAAAAGAATGTT---TAACTGACTTAATGATTATATACAGGCACAAGTGTAAACAAGTATT--TG-CTTGTATTCAAAATGT-GATTGGAACTCTTATGAAACTTAGAGACTGA----AAAGTACATTCATTTCCAATTATTGGTTTGATGAAG----aaaaaaa--CCCATATTTAAATCTAACATTACCATTAATCCATTTCACAATTAGAAACAGTTTAACTTGTAACTCTCATGATTttacatacaaaaagaaaaatcatataaagCTTCATCTCCTACTGCATTCTCTCTGAAGAccttatagttttaaaaacaaaaatatcaatcaCTCCTGGTTGGGCTCAATTTATTTTGAATgggggg-------------gTGATTTTCAGATAAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18562987 428 + 33263144 aaaaaaaaaaaaaaagaaaaTATTTTAGGATGTCGGATTCTAAACCCTTA--AATATTAAAACACT-----------AAGAATGTT---TAACTGACTTAATGATTATATACAGGCACAAGTGTAAACAAATATTTATG-TTTGTATTCAAAATGT-GATTGGAACTCTTATGAAACTTAGAAACTGA----AAAGTACCTTCATTTCAAATTATTGGTTTGATGAAG-----AAAAAA--CCCATATTTAAATCTAACACTACCATTAATCCATTTCACAATTAGAAACAGTTTAACTTGTAACTCTCATGATTTTACGTACAAAAAAACCAATTATATAAAGCTTCATCTCCTACTGTATTCTCTCTGAAGACTTTATAGTTTTAAGAACAAAAATATCAATCACTCCTGGTTGGGCTCAATTTATTTTGAATGGGGGG-------------GTGATTTTCAGATAAG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198264987 404 + 210400635 --------------------AATTTTAGGATGTCAGATTCTGACACCTTA--AATATTAAAACACT-----------AAGAATGTT---TAACTGGTTTAAAGATTACATACAGGCACAAGTGTAAATAAATATCAATG-TTTGTATTTAGAATGT-GGTTGGAACTCTTAGGAAACTTAGAAAGAGACTGAAAAGTACATTCATTTCATATTACAGGTGTGATGAAG----AAAAAAA--CCCACATTTAAATTTAACATTACCATTAATTCATTTCACAGTTAGAAACAGTTTAATTTATAAC--TCATGATTTTACATAC-AAAAAA------ACATAAAGCTTAATCTCCTACTGTATTCTCTCTGAAGATCTCATGGTTTTAAGAACAAAAATATCAATCACTCCTAGTTGGGCTCCATTTATTTTGAATGGGGGG-------------GTCATCTTCAGACAAG i calJac3.chr1 C 0 C 0 s canFam3.chr10 40885631 426 - 69331447 aaaaaaAAAAGAGGGAAAGGTATTTTGGGATGTTAGATTCTAAACCCTAAAGAATATTAAAACACA-----------AAGAATGTTGGCTAGTTGGCTTAATGACTATACAAAAGCAGAGCTACAGACAATTACTTGTA-TTTGTATAGAGTATGTGGATTGGACCACTTATAAAAGTCAGATATGGGCTGAAAAGTCTATTCACTTCAAACTACTGGCACAGTAAAGGAAAAAAAAAA--CC--------AATCTGATATCACTATT-ATCTATTCCCAAATTAGGAACAGTTTAATTTATAAATCTC----TCTTACTTAC--AGAGGTAAGCCACAT-AAGTGTCATATCCTGCAGCATTTCCCCTGAAGATCTCATCATTTTAAGAACAAAAGT----ATGATTCCTAGTTGGTTTCAATTTCTTTTGGATGGGGTG--------GGA--TCGGTCTTCAGTTAAG i canFam3.chr10 C 0 I 107 e mm10.chr15 77118980 3626 + 104043685 I a score=708556.000000 s hg38.chr22_KI270876v1_alt 112822 211 + 263666 GTATG--------------------------------------------------------TAAATGAATA---------------------------CTTTCCATAGACTCAAATAGGTAATTTTCACAGTATTATGAAGTCA---ACATTTAGTGTAAGGGACATAGTTCTGAAAAATGTGTCATTCAAGAATAAGCCTATCAAAGGTCAGTAGATATTTCTATTAACTGCTCAAAGTACATCTGCCATGTGAATTACCATGCAATTCAAATAGCTTTCAAATTAGGCAACTATT s panTro4.chr22 34490799 211 + 49737984 GTATG--------------------------------------------------------TAAATGAATA---------------------------CTTTCCATAGACTCAAATAGGTAATTTTCACAGTATTATGAAGTCA---ACATTTAGTGTAAGGGACATAGTTCTGAAAAATGTGTCATTCAAGAATAAGCCTATCAAAGGTCAGTAGATATTTCTATTAACTGCTCAAAGTACATCTGCCATGTGAATTACCATGCAATTCAAATAGCTTTCAAATTAGGCAACTATT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30906761 211 + 46535552 GTATG--------------------------------------------------------TAAATGAATA---------------------------CTTTCCATAGACTCAAATAGGTAATTTTCACAGTATTATGAAGTCA---ACATTTAGTTTAAGGGACACAGTTCTGAAAAATGTGTCATTCAGGAATAAGCCTGTCAAAGGTCAGTAGATATTTCTATTAACTGCTCAAAGTACATCTGCCATGTGAATTACCATGCAATTCAAATAGCTTTCAAATTAGGCAACTATT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100459415 211 - 115148730 GTATG--------------------------------------------------------TAAATGAATA---------------------------CTTTCCATAGACTCAAATAGGTAATTTTCACAGTATTATGAAGTCA---ATATTTAGTGTAAGGGACATAGTTCTGAAAAATGTGTCATTCAAGAAGAAGCCTATCAAAGGTCAGTAGATCTTTCTATTAACTGCTCAAAGTACATCTGCCATGAGAATTACCATGCAATTCAAATAGCTTTCAAATTAGGCAACTGTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80609718 211 + 95678458 GTATG--------------------------------------------------------TAAATGAATA---------------------------CTTTCCATAGACTTAAATAGGTAATTTTCACAGTATTATGAAGTCA---ACATTTAGTGTAAGTGATATAGTTCTGAAAAAAGTGTAATCTAAGAATAAGCCTATCAAAGGTCAGTAGATATTTCTATTAACTGCTCAAAGTACATCTGCCATGTGAATTACCGTGCAATTCAAATAGCTTTCAAATTAAGCAACTATT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81036531 211 - 96509753 GTATG--------------------------------------------------------TAAATGAATA---------------------------CTTTCCATAGACTTAAATAGGTAATTTTCACAGTATTATGAAGTCA---ACATTTAGTGTAAGTGATATAGTTCTGAAAAAAGTGTAACCTAAGAATAAGCCTATCAAAGGTCAGTAGATATTTCTATTAACTGCTCAAAGTACATCTGCCATGTGAATTACCGTGCAATTCAAATAGCTTTCAAATTAAGCAACTATT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76294675 211 + 90941950 GTATG--------------------------------------------------------TAAATGAATA---------------------------CTTTCCATAGACTTAAATAGGTAATTTTCACAGTATTATGAAGTCA---ACATTTAGTGTAAGTGATATAGTTCTGAAAAAAGTGTAATCTAAGGATAAGCCTATCAAAGGTCAGTAGATATTTCTATTAACGGCTCAAAGTACATCTGCCATGTGAATTACCGTGCAATTCAAATAGCTTTCAAATTAAGCAActatt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18563415 211 + 33263144 GTATG--------------------------------------------------------CAAATGAATA---------------------------ATTTCCACAGACTTAAATAGGTAATTTTCACAGTATTATGAAGTCA---ACATTTAGTGTAAGTGATATAGTTCTGAAAAAAGTGTAATCTAAGAATAAGCCTATCAAAGGTCAGTAGATAATTCTATTAACTGCTCAAAGTACATCTGCCATGTGAATTACCGTGCAATTCAAATAGCTTTCAAATTAAGCAACTATT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198265391 210 + 210400635 GTATG--------------------------------------------------------TGAATGAATC---------------------------CTTTCCATAGACTCAAATAGGT-ATTTTCATAGTATTATGAAGTCA---ACATTTAGTGTAAGAGACAAAGTTCCGAAAACAGTGTAATTCAAGAATAAACCTATAAAAGGTCAGTAGATATTTCCATTAACTGTTAAAAGTACATCTGTCAAGTGAATTACCATGCAATTCAAATAGCTTTCAAATTAGGCAACTATT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40886164 296 - 69331447 gcatggagcctgcttctccctctgcctgtgtctctgcctctctctctatgtctgtcatgaataaatgaataaaatcttaaaaaaaaaAAAAAAGGCTCCTCCTCATAGGAT-GAATCAGTTATTTTAACAATGTTACAAAGTCAGTCACATATGGTATAAGGGACATGGTTCTGAAAACTGCAAAATTCAAGACTAAATTTATCAAAAGATAGTAGATATTTCTATTAATGGCTAAAAGTAGAGCTGTCTTGTCAATCACCATATAATTCAGACAGCTTTGAAATTAGGCAATTATT i canFam3.chr10 I 107 I 442 e mm10.chr15 77118980 3626 + 104043685 I a score=694303.000000 s hg38.chr22_KI270876v1_alt 113033 280 + 263666 -gctgggtgtggaggctcacacctgtaatcccagcactttaggaggctgaggcaggtggatcacttgaggttaggagtttgagaccagcctggccaacatggtgaaactctgtctctactaaaaatacaaaaattaggtaggcgtggcagtgggcacctgtaatcccagctacttgggaagctttggcacgagaattgcttgaaccg---ggaggtggaggttgcagtgagccgagattatgccactgcagtccagcctgggtgacag-aatgaaactccgtctc s panTro4.chr22 34491010 283 + 49737984 -gctgggtgtggtggctcacacctgtaatcgcagcactttaggaggctgaggcaggtggatcacttgaggttaggagtttgagaccagcctggccaacatggtgaaaccctgtctctactgaaaatacaaaaattagctaggcgtggcagtgggcacctgtaatcccagctacttgggaagctttggcacgagaattgcttgaactgggaggaggtggaggttgcagtgagccgagattatgccactgcagtccagcctgggtgacag-aatgaaactccgtctc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30906972 279 + 46535552 -gctgggtgtggtggctcacacctgtaatcccagcactttaggaggctgaggcaggtggatcacttgaggtcaggagtttaagaccag-ctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagctaggcgtggtggtgggcacctgtaatcccagctacttgggaagctttggcagcagaattgcttgaaccg---ggaggtggaggttgcagtgagccgagattatgccactgcagtccagcctgggtgacag-aatgaaactccgtctc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100459626 280 - 115148730 -gctgggtgtggtggctcacacctgtaatcccggcactttaggaggctgaggcaggtggatcacttgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaactagctaagtgtggtggtgggcacctgcaatcccagctactcgggaagctttggcaggagaattgcttgaaccg---ggaggtggaggttgcagtgagccgaaattatgccactgcagtccagcctgggtgacag-aatgaaacgccgtctc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80609929 237 + 95678458 -gctgggtgtggtggctcacatctgtaatcccagcacttttggaggctgaggcaggtggatcacttgaggtcaggagttcgagaccagtctggccaacatggtaaaaccctgtctctactaaaaatacaaaaattcactaggcgtgg--------------------------------------------agaattgcttgaaccc--cggaggcggaggttgcagtgaaccaagattatgccactgcactccagcctggatgacag-agcaaaactccgtctc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81036742 237 - 96509753 -gctgggtatggtggctcacatctgtaatcccagcacttttggaggctgaggcaggtggatcacttgaggtcaggagttcgagaccagtctggccaacatggtaaaaccctgtctctactaaaaatacaaaaattcactaggcgtgg--------------------------------------------agaattgcttgaaccc--cggaggcggaggttgcagtgaaccaagattatgccactgcactccagcctggatgacag-agcaaaactccgtctc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76294886 237 + 90941950 -gctgggtgtggtggctcacatctgtaatcccagcactttaggaggctgaggcaggtggatcacttgaggtcaggagttcgagaccagtctggccaacatgatgaaaccctgtctctactaaaaatacaaaaattcgctaggcgtgg--------------------------------------------agaattgcttgaaccc--cggaggcggaggttgcagtgaaccaagattatgccactgcactccagcctgtatgacag-agcaaaattccgtctc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18563626 237 + 33263144 -gctgggtgtggtggctcacatctgtaatcccagcactttaggaggctgaggcaggtggatcacttgaggtcaggagttcgagaccagtctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattcgctaggcgtgg--------------------------------------------agaattgcttgaaccc--cggaggcggaggttgcagtgaaccaagattatgccactgcactccagcctggatgacag-agcaaaactccatctc i chlSab2.chr19 C 0 I 38 s calJac3.chr1 198265601 280 + 210400635 ggctgagtgcggtggctcacgtgtgtaatcccagcactttaggaggctgagacaggtggatcacttgaagccaggagatcaagaccagcctggccaacagggtgaaaccctgtctctactaaaaatacaaaaattagctgggcgtggtgatgggcacctgtaataccagcttcttgggaagctgacgc---agaactgcttgaacct--gggaggcggaggttgcagtgagctcagattgtgccactacactcctgcctaggtgacagaagggagactccctctc i calJac3.chr1 C 0 C 0 e mm10.chr15 77118980 3626 + 104043685 I e canFam3.chr10 40886460 442 - 69331447 I a score=1793.000000 s hg38.chr22_KI270876v1_alt 113313 33 + 263666 aaaaaaaaaaaaaaaaaaagaaaagaaaagaaa s panTro4.chr22 34491293 26 + 49737984 aaaaaaaaaaaaaaaaaa-------aaaagaaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30907251 5 + 46535552 aaaaa---------------------------- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100459906 16 - 115148730 aaaaaaaaaaaaaaaa----------------- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80610166 11 + 95678458 aaaaaaagaaa---------------------- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81036979 11 - 96509753 aaaaaaagaaa---------------------- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76295123 11 + 90941950 aaaaaaagaaa---------------------- i papAnu2.chr10 C 0 C 0 s calJac3.chr1 198265881 15 + 210400635 -aaaacagacaaacaa----------------- i calJac3.chr1 C 0 C 0 e mm10.chr15 77118980 3626 + 104043685 I e canFam3.chr10 40886460 442 - 69331447 I e chlSab2.chr19 18563863 38 + 33263144 I a score=179456.000000 s hg38.chr22_KI270876v1_alt 113346 81 + 263666 agaaaagaaaagaaaag--aaaaagaaaaagaaaTTAGGCAACTATTAACAAAATTTTCATTTGCAGAGATTCACACTGAATC s panTro4.chr22 34491319 81 + 49737984 agaaaagaaaagaaaag--aaaaagaaaaagaaaTTAGGCAACTATTAACAAAATTTTCATTTGCAGAGATTCACACTGAATC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30907256 79 + 46535552 --aaaagaaaagagaag--aaaaagaaaaAGAAATTAGGCAACTATTAACAAAGTTTTCATTTGGAGAGATTCACACTGAATC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100459922 79 - 115148730 --aaaaaaaaagaaaag--aaaaagaaaaaGAACTTAGGCAGCTATTAACAAAGTTTTCATTTGGAGAGATTCACACTGAATC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80610177 64 + 95678458 -------------------aaaaagaaaaagaaaTTAGGCAACTATTAACAAAGTTTTCATTTGGAGGGATTCATATTGAATC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81036990 64 - 96509753 -------------------aaaaagaaaaagaaaTTAGGCAACTATTAACAAAGTTTTCATTTGGAGGGATTCATATTGAATC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76295134 64 + 90941950 -------------------aaaaagaaaaagaaattaggcaACTATTAACAAAGTTTTCATTTGGAGGGATTCATATTGAATC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18563901 81 + 33263144 --aaaaaaaaaaaaaaaaaaaagagaaaaagaaaTTAGGCAACTATTAACAAAGTTTTCATTTGGAGGGATTCACATTGAATC i chlSab2.chr19 I 38 C 0 s calJac3.chr1 198265896 58 + 210400635 -------------------------acaaaaaaaTTAGGCAAGTATTAACAAAGTTTTCATTCGGAAAGATTCACACTGAATC i calJac3.chr1 C 0 C 0 e mm10.chr15 77118980 3626 + 104043685 I e canFam3.chr10 40886460 442 - 69331447 I a score=406034.000000 s hg38.chr22_KI270876v1_alt 113427 125 + 263666 AAAATTTGCACAAAAGTGAAACATTATTAACTTTTT----ATATCAGATTTC-AAATCTAAATGATTTAAATTTGAATAA-AATAAGATTATGACATATTTAATATTCAACGAATTGAAATGGAAACATCA s panTro4.chr22 34491400 125 + 49737984 AAAATTTGCACAAAAGTGAAACATTATTAACTTTTT----ATATCAGATTTC-AAATCTAAATGATTTAAATTTGAATAA-AATAAGATTATGACATATTTAATATTCAAGGAATTGAAATGGAAACATCA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30907335 125 + 46535552 AAAATTTGCACAAAAGTGAAACTTTATTAACTTTTT----ATATCAGATTTC-AAATCTAAATGatttaaatttaaataa-aataaGATTATGACATATTTAATATTCAAGGAAATGAAATGGAAACATCA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100460001 125 - 115148730 AAAATTTGCACACAAGTGAAACTTTATTAACTTTTT----ATATCAGATTTC-AAATCTAAATGATTTAAATTAGAATAA-AATAAGATTATGACATATTTAATATTCAAGGAAATGAAATGGAAACATCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80610241 120 + 95678458 AAAATTTGCACAAAAGTGAAACTTCATTAACTTTTT----ATATCAGATTTC-AAATCTGAATGATTTAAATTTG------AATAAGATTGTGACATATTTAATATTCAAAGAAATGAAATGGAAacatca i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81037054 120 - 96509753 AAAATTTGCACAAAAGTGAAACTTCATTAACTTTTT----ATATCAGATTTC-AAATCTGAATGATTTAAATTTG------AATAAGATTGTGACATATTTAATATTCAAGGAAATGAAATGGAAacatca i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76295198 120 + 90941950 AAAATTTGCACAAAAGTGAAACTTCATTAACTTTTT----ATATCAGATTTC-AAATCTGAATGATTTAAATTTG------AATAAGATTGTGACATATTTAATATTcaaggaaatgaaatggaaacatca i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18563982 120 + 33263144 AAAATTTGCACAAAAGTGAAACTTCATTAACTTTTT----ATATCAGATTTC-AAATCTGAATGATTTAAATTTG------AATAAGATTGTGACATATTTAATATTCAAGGAAATGAAATGGAAACATCA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198265954 126 + 210400635 AAAATTTGCACAAAAGTGAAACTTCATTAACTTTTT----ATATAAGATTTTAAAATCTGAATGATTTAAATTTGAATAA-AATAAGATTGTGACATATTTAATATTCAAGGAAATGAAACAGAACCATCA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40886902 129 - 69331447 AAAATTTACACAAAAGTGAAATTTCATGAACTTTTCTGAATTATACTATTTC-AAATTTGAATTACTCAAAATTCATTACTCATAAAACTGTGATGTGTTT-ATTCCCAAGAAAATATAATGGGAAGATCA i canFam3.chr10 I 442 I 481 e mm10.chr15 77118980 3626 + 104043685 I a score=23904.000000 s hg38.chr22_KI270876v1_alt 113552 7 + 263666 TAGCCta s panTro4.chr22 34491525 7 + 49737984 TAGCCta i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30907460 7 + 46535552 TAGCCta i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100460126 7 - 115148730 TAGCCta i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80610361 7 + 95678458 tagccta i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81037174 7 - 96509753 tagccta i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76295318 7 + 90941950 TAGCCTA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18564102 7 + 33263144 TAGCCta i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198266080 7 + 210400635 TAGCCTA i calJac3.chr1 C 0 C 0 e mm10.chr15 77118980 3626 + 104043685 I e canFam3.chr10 40887031 481 - 69331447 I a score=1214849.000000 s hg38.chr22_KI270876v1_alt 113559 370 + 263666 ctaagtatttgatattcattttctcatctaatcttgcaaacaaccgtaggcggaaggaactattatcatcatttttacagataaggaaaatgagcattggagttctaattctctcatggttacacattcagtcaacagaaggagctgagagctgaa-ccagcgcaacctgatttaca-ggctcacactcCCTAAACACAAT--------------ATAGCC--TTTTTAAAAAAA----------TAAAAACACTTTAAAATTT-----TCAGTTTTTCCTTACAATATTTTACAAAGTTGGCCAGGATACTTTTCATTATGCCATTGCATAGTATCTC-AAAAA----ACAAGAACTACAATCCATGTTAGAACATCAACCAGATTTGTTAGCACTTAAAGTACttt s panTro4.chr22 34491532 370 + 49737984 ctaagtatttgatattcattttctcatctaatcttgcaaacaaccgtaggtggaaggaactattatcatcatttttacagataagaaaaatgagcattggagttctaattctctcatggttacacattcagtcaacagaaggagctgagagctgaa-ccagcgcaacctgatttaca-ggctcacactcCCTAAACACAAT--------------ATAGCC--TTTTTAAAAAAA----------TAAAAACACTTTAAAAATT-----TCAGTTTTTCCTTACAATATTTTACAAAGTTGGCCAGGATACTTTTCATTATGCCATTGCATAGTACCTC-AAAAA----ACAAGAACTACAATCCATGTTAGAACATCGACTAGATTTGTTAGCACTTAAAGTACttt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30907467 371 + 46535552 ctaagtatttgatattcattttctcatctaatcttgcaaacaaccctaggcggaaggaactattatcatcatttttagggataaagaaaatgagcattggagttctaattctctcatggttacacattcagcaaacagaaggagctgagagctgaa-ccagctcaacctgattcaca-ggctcacactcCCTAAACACAAT--------------ATAGCC--TTTTTAAAAAAA----------TAAAAACACTTTAAAAATT-----TCAGTTTTTCCTTACAATATTTTACAAAGTCGGCCGGGATACTTTTCATTATGCCATTGCATAGTACCTTAAAAAA----ACAAGAACTACAATCCATGTTAGAACATCGACTAGATTTGTTAGCACTTAAAGTACttt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100460133 369 - 115148730 ctaagtatttgacattcattttctcatctaatcttgcaaacaaccctaggcggaaggaactataatcatcatttttacagataaggaaaatgagcattggagttctaattctctcatggttacacattcagcaaacagaaggagctgacagctgaa-ccagctcaacctgatttaca-ggctcacattcCCTAAACACAAT--------------ATAGCC--TTTTTAAAAAAA----------TAAAAACACTTTAAAAATT-----T--GTTTTTCCTTACAATATTTTACAAAGTCAGCCGGGATACTTTTCATTATGCCATTGCATAGTACCTTAAAAAA----ACAAGAACTACAATCCATGTTAGAACATCGACTAGATTTGTTAGCACTTAAAATACttt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80610368 371 + 95678458 ctaagtatttgatattcattttctcatctaatcttgaaaacaaccctaggcggaaggcactattatcaccatttttacagataaggaaaatgagcattggagttctaattctctcatggttacacatttagcaaacagaaggagctgagagctgaa-ccagctcaacctgatttact-ggctcatactccctcaacacaat--------------atagcc--tTTATTAAAAAA----------TAAAAACGCTTTAAAAAAT-----TCATTTTTTTCTTAAAATATTTGACAAAGTTGGCCGGGAAACTTTTCATTATGCCATTGCATAGTACCTTAAAAAA----ACAAGAACTACAATCCATGTTAGAACTTCAACTAGATTTGTTAGCACTTAAAGCACttt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81037181 371 - 96509753 ctaagtatttgatattcattttctcatctaatcttgaaaacaaccctaggtggaaggcactattatcaccatttttacagataaggaaaatgagcattggagttctaattctctcatggttacacatttagcaaacagaaggagctgagagctgaa-ccagctcaacctgatttact-ggctcatactccctcaacacaat--------------atagcc--tTTATTAAAAAA----------TAAAAACGCTTTAAAAAAT-----TCATTTTTTTCTTAAAATATTTGACAAAGTTGGCCGGGAAACTTTTCATTATGCCATTGCATAGTACCTTAAAAAA----ACAAGAACTACAATCCATGTTAGAACTTCAACTAGATTTGTTAGCACTTAAAGCACttt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76295325 370 + 90941950 CTAAGTATTTgatattcattttctcatctaaTCTTGAAAACAACCCTAGGCGGAAGGAACTATTATCAccatttttacagataaggaaaatgagcaTTGGAGTTCTAATTCTCTCATGGTTACACATTTAGCAAACAGAAGGAGCTGAGAGCTGAA-CCAGCTCAACCTGATTTACT-GGCTCACACTCCCTCAACACAAT--------------ATagcc--tttattaaaaaa----------taaaaatgctttaaaaaat-----tcatttttttcttaaaatattttacaaagttggCCGGGAAAC-TTTCATTATGCCATTGCATAGTACCTTaaaaaa----aCAAGAACTACAATCCATGTTAGAACTTCAACTATACTTGTTAGCACTTAGAgcacttt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18564109 371 + 33263144 ctaagtatttgatatacattttctcatctaatcttgaaaacaaccctaggcggaaggaactattatcaccatttttacagataaggaaaatgagcactggagttctaattctctcatggttacacatttagcaaacagaaggagctgagagctgaa-ccagctcaacctgatttaca-ggctcacgctcCCTAAACACAAT--------------ATAGCC--TTTTTTAAAAAA----------TAAAAATGCTTTAAAAAAT-----TCATTTTTTTCTTACAATATTTTACAAAGTTGGCCAGGAAACTTTTCATTATGCCATTGCATAGTACCTTAAAAAA----ACAAGAACTACAATCCATGTTAGAACTTCGACCAGATTTGTTAGCACTTAAAGCACttt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198266087 377 + 210400635 c-------ttgatattcattttctcatgtaattatgaaaacaaccctaggcagaaggaactattatcaccatttttacagatgaggaaaatgagcattggagttataattctctcatggttacacattcagcaaacagaaggagctgagagctgaa-ccagctcaatctgatttaca-gggtcacactccctaaacacaatattataTAATAAAAATAGTCttttttttttttaa----------taaaaaaGCTTTAAAAATT-----C--AGTTTTCCTTACAATATTTTACAAAGTCGGCTGGGATACTTTTCATTATGCCACTGCATAGTACCTTAAAAAA----ACAAGAACTACAATTCAT-TTAGAACATCGACTAGATTTGTTAGTACTTAAAGTAAttt i calJac3.chr1 C 0 C 0 s canFam3.chr10 40887512 388 - 69331447 ctaagtacttgctattcattttcctatgtaatc-caaaaacaaccctatcagctaggaactattatcaccatttttacagatgaggaaaatgagcattagagttataattttcagatggttacacaattagcaaaaggaaggagctgggagctaaacccaactcaatctgatttctatggctcaagctccctagccacAGT-------------CACAATA--TTATATAACAAAACATTTCTTCTAAAACAACTTTAAAAAACAAATGTCAGTTTTCTCT--GAATATTTTAGAAAGCGGGTTGGGATACTTTTCAT--TGTCATTTTACATTGCCTTGAAAAAAGGGAGGGGAACTACAGCCTATGTTGACCCACCAACTAGGTTTGTTAGCATTTGAAGCATTTT i canFam3.chr10 I 481 C 0 e mm10.chr15 77118980 3626 + 104043685 I a score=1230426.000000 s hg38.chr22_KI270876v1_alt 113929 463 + 263666 --tgttttaattttcttggagacagggtctcccaatgttgcccaggctggtctcaaactcctgggctc-aagagatttacaggcctaagcttcccaggttgctgggattacaggtgcatgccaccatgcctagcTAAGCATTTTGAAAATGTTTCTAATGGggccgggtgcaatggctcacgcctgtaatcccagcactttgggaggccaaggcgggtggatcacctgaggtcaggagttcgagaccagc-ctggccaacgtggtgaaaccccatctctactaaaaatagaaagaaattagccaggtgtggtggcaggcgcctgtaattccagctac-ttggaggctgaggcaggagaatcgcttgaacccggggggcagagattgcagtgagctgaaaccacgccatcacactctagcatgggcaacaagaatgaaactctgtctcaaaaataaataaaTCAATGAA s panTro4.chr22 34491902 464 + 49737984 --tgttttaattttcttggagacagggtctcccaatgttgcccaggctggtctcaaactcctgggctcaaagagatttacaggcctaagcttcccaggttgctgggattacaggtgcatgccaccatgcctagcTAAGCATTTTAAAAATGTTTCTAATGGggccgggtgcaatggctcatgcctgtaatcccagcactttgggaggccaaggcaggtggatcacctgaggtcaggagttcgagaccagc-ctggccaacatggtgaaaccccatctctactaaaaatagaaagaaattagccaggtgtggtggcaggcgcctgtaattccagctac-ttggaggctgaggcaggagaatcgcttgaacccggggggcagaggttgcagtgagctgaaaccacgccatcgcactctagcatgggcaacaagaatgaaactctgtctcaaaaataaataaaTCAATGAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30907838 459 + 46535552 --tgttttaattttcttggagacagggtctcccaatgttgcccaggctggtctcaaactcctgggctc-aagagatttacaggcctaagcttcccaggttgctgggattacaggtgcatgccaccatgcctagcTAAGCATTTTTAAAATGTTTCTAATGGggccgggtgccatggctcatgcctgtaatcccagcactttgggaggccaaggcgggcggatcacctgaggtcaggagttcgagaccagc-ctggccaacatggtgaaaccccatctctactaaaaat----agaaattagctgggtgtggtggcaggcgcctgtaattccagctac-ttggaggctgaggcaggagaatcgcttgaacccggggggcagagtttgcagtgagctgaaaccacgccattgcactctagcatgggcaacaagaacaaaactctgtctcaaaaataaataaaTCAATGAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100460502 451 - 115148730 --tgttttaattttgttggagacagggtctcccaatgttgcccaggctggtctcaaactcctaggctc-aagagatttacaggcctaagctttccaggttgctgggattacaggtgcatgccaccatgcctagcTAAGCATTTTTAAAATGTTTCTAATGGggccgggtgcaatggctcacgcctgtaatcccagcactttgggaggccaaggtgggcggatcacctgaggtcaggagttcgagaccagc-ctggccaacatggtgaaaccccacctctactaaaaat----agaaattagctgggtgtggcggcaggcgcctgtaattccggctac-tcggaggctgaggcaggagaattgcttgaactcaggaggcagaggttgcagtgagctgaaaccatgccattgcactctagcatgggcaacaagaacgaaactcggtctcaa--------aaaTCAATGAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80610739 449 + 95678458 --tgttttaattttcttggagacagggtctcccgatgttgcacaggctggtctcgaactcctgggctc-aagagattctcaggtctaagctttacaggttgctgggattacaggtgcatgccaccatgcctagTTAAGCATTTTAAAAATGTTTCTAATAGggctgggcacaatgacgcatgcctgtgatcccagcactttgggaagctgaggcaggcggatcacctgaggtcaggagttcaagaccagt-ctggccaacatggtgaaacctcacctctactaaaaataaaaaggaattagccgggcatggtgacaggcacctgtaatcccagcgacatgggaggctgaggcaggagaatcgcttgaacccgggggacggaggttgcagtgagctgagatcatgccattgtactccagtatgggcaacaagaatgaaattctgtctc---------TTAATA------ i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81037552 449 - 96509753 --tgttttaattttcttggagacagggtctcccgatgttgcacaggctggtctcgaactcctgggctc-aagagattctcaggtctaagctttacaggttgctgggattacaggtgcatgccaccatgcctagTTAAGCATTTTAAAAATGTTTCTAATAGggctgggcacaatgacgcatgcctgtgatcccagcactttgggaagctgaggcaggcggatcacctgaggtcaggagttcaagaccagt-ctggccaacatggtgaaacctcacctctactaaaaataaaaaggaattagccaggcatggtgacaggcacctgtaatcccagcgacatgggaggctgaggcaggagaatctcttgaacccgggggacggaggttgcagtgagctgagattatgccattgtactccagtatgggcaacaagaatgaaattctgtctc---------TTAATT------ i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76295695 449 + 90941950 --tgttttaattttcttggagacagggtctcccgatgttgcacaggctggtctcgaactcctgggctc-aagagattctcaggTCTAAGCTTTAcaggttgctgggattacaggtgcatgccaccatgcctagttaagcattttaaaaatgtttctaatagggctgggcacaatgacgcatgcctgtgatcccagcactttgggaagctgaggcaggcagatcacctgaggtcaggagttcaagaccagt-ctggccaacatggtgaaacctcacctctactaaaaataaaaaggaattagccgggcatggtgacaggcacctgtaatcccagagacatgggaggctgaggcaggagaatcgcttgaacccgggggacggaggttgcagtgagctgagatcatgccattgtactccagcatgggcaacaagaatgaaattctgtctc---------ttaATA------ i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18564480 455 + 33263144 --tgttttaattttcttggagacagggtctcccgatgttgcacaggctggtctcgaactcctgggctc-aagagattctcaggcctaagcttcacaggttgctgggattacaggtgcatgccaccatgcctagTTAAGCATTTTAAAAATGTTTCTAATAGgactgggcacaatgacgcatgcctgtaatcccagcactttgggaagctgaggcgggcagatcacctgaggtcaggagttcgagaccagt-ctggccaacatggtgaaacctcacctctactaaaaataaaaaggaattagccgggcatggtgacaggcacctgtaatcccagctacatgggaggctgaggcagaagaatcgcttgaacccgggggacagaggttgcagtgagctgagatcatgccattgcactccagcatgggcaacaagaatgaaattctgtctc---------ttaataaataaa i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198266464 411 + 210400635 tatgttttagttttctcggagacggtgtctcccagtgttgcccaagctgctctttaactctggggctc-aagagattcccaggccttagcttcccaggttactgggattacaggtgcatgctacTat------------------------------------------------------gcctgtaatcccagcactctgggatgctgaggcaggcagatcacctgaggtcaggagtttgagaccggctttggccaacatggtgaaaccccatatctactacaactacaaaaaaattagctgggtgtggtgacaggcacctgtaattctatctacttgggaggctgaggcaggaaaattgcttgaacccaggaggtggaggttgcagtgagccgagattgcgccattgcactccagcctgggcaacaaaaacaaaactctgtctcaaaaaaT--TAAATATATAAA i calJac3.chr1 C 0 C 0 e mm10.chr15 77118980 3626 + 104043685 I e canFam3.chr10 40887900 0 - 69331447 C a score=2067719.000000 s hg38.chr22_KI270876v1_alt 114392 674 + 263666 TAAAAATGTTTACGATGGAGTTCCTGATGGGTTAAAACTTGGTGGAATTAGATCATATGCATTCCTTCTCACAGAGTACAAACGCAATAACATGATAAAATATTTTTCAAAAAAGTAAAATCTTAGCCCACATGCTTAGCTACTGAAAAATCAATGTACTTCATGGTGCTAAAATAATATATAAG-----ACAATTATAATCAATTGAATATAAAATTATTTTATCAAATATCACCACCAAAACAATTTTTTAGACACAGAAAAGTGAATTTACATTTACTTAGAGCAACTCCCTATTTAAGAATAATTACTTTTAGATTTAT---TTTAAAGAGAAATGCTTAAACATTTCTTCTGTGCATTTGAACACTGTTATGACAAGCTGAATTCTGAGAGTCTAATCCTGTTTGGGCATTCAAATGTAAGCTAAC--TTTTTTTAATAAACGAGTAATTCCATTTCTTCTGAAAATATGTGATTCCATTTTCTCAGAGTGTCAAAGTGCCACAAAAAGGAATTATGAAAGGCATCATTTGTATATGTAACATGATCATGTACTGATTATCAGTGTCACGCTGTGAAACAAAAACCACAGCAAGTCAT---TTTTTTAAACAGGAGTAAGAATTGTATAAAATTATATGTAACATATAAATAGTGACATGCACACAGAATATCACCTCAATT s panTro4.chr22 34492366 674 + 49737984 TAAAAATGTTTATGATGGAGTTCCTGATGGGTTAAAACTTGGTGGAATTAGATCATATGCATTCCTTCTCACAGAGTACAAACGCGATAACATGATAAAATATTTTTCAAAAAAGCAAAATCTTAGTCCACATGCTTAGCTACTGAAAAATCAATGTACTTCATGGTGCtaaaataatatataag-----acaattataatcaattgaatataaaattattttatCAAATATCACCACCAAAACAATTTTTTAGACACAGAAAAGTGAATTTACATTTACTTAGAGCAACTCCCTATTTAAGAATAATTACTTTTAGATTTAT---TTTAAAGAGAAATGCTTAAACATTTCTTCTGCGCATTTGAACACTGTTATGACAAGCTGAATTCTGAGAGTCTAATCCTGTTTGGGCATTCAAATGTAAGCTAAC--TTTTTTTAATAAACGAGTAATTCAATTTCTTCTGAAAATATGTGATTCCATTTTCTCAGAGTGTCAAAGTGCCACAAAAAGGAATTATGAAAGGCATCATTTGTATATGTAACATGATCATGTACTGATTATCAGTGTCACGCTGTGAAACAAAAACCACAGCAAGTCAT---TTTTTTAAACAGGAGTAAGAATTGTATAAAATTATATGTAACATATAAATAGTGACATGCACACAGAATATCACCTCAATT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30908297 651 + 46535552 TAAAAACGTTTATGATGGAGTTCCTGATGGGTTAAAACTTGGTGGAATTAGATCATATGTATTCCTTCTCACAGAGTACAAACACGATAACATGATAAAATATTTTTCAAAAAAGTAAAATCTTAGCCCACAT-------------------------TTTCATGGTGCtaaaataatatataag-----acaattataataaattgaatataaaattattttatCGAATATCACCACCAAAACAATTTTTCAGACATAGAAAAGTGAATTTACATTTACTTAGAGCAATTCCCTATTTAAGAATAATTACTTTTAGATTTAT---TTTAAAGAGAAATGCTTAAACATTTCTTCTGCGCATTTGAACACTGTTATGACAAGCTGAATTCTGAGAGTCTAATCCTGTTTGGGCATTCAAATGTAAGCTAACATTTTTTTTAATAAACGAGTAATTCAATTTCTTCTGAAAATATGTGATTTCATTTTCTCAAAGAGTCAAAGTGCCACAAAAAGGAATTACGAAAGGCATCATTTGTATATGTAACATGATCATGTACTGATTATCAGTGTCACGCTGTGAAACAAAAACCACAGCAAGTCAT---TTTTTTAAACAGGAGTGAGAACTGTATAAAATTATATGTAATATATAAATAGTGACATGCACACAGACTATCACCTCAATT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100460953 666 - 115148730 TAAAAATGTTTATGATGGAGTTCCTGATGGGTTAAAACTTGGTGGAATTAGATCATATGCATTCCTTCT--CGGAGTACAAATGTGATAACATGATAAAATATTTTTCAAAAAAGTAAAATCTTAGCCCACATGCTTATCTACTGAAAAATCAGTGTACTTCATGGTGCTAAAATAATATATAAG-----ACAATTATAATAAATTGAATATAAAATTATTTTATCGAATATCACCACCAAAACAATTTTTTAGACATAGAAAAGTGAATTTACATTTACTTAGAGCAATTCCCTATTTAAGAATAA----TTTAAGATTTAT---TTTAAAGAGAAATGCTTAAGCATTTCTTCTGCACATTTGAACACTGTTATGACAAGCTGAATTCTGAGAGTCTAATCCTGTTTGGGCATTCAAATGTAAGCTAAC--TTTTTTTAATAAATGAGCAATTCAATTTCTTCTGAAAATA--TGATTCCATTTTCTCAGAGTGTCAAAGTGCCACAAAAAGGAATTATGAAAGGCATCATTTATATATGTAACATGATCATGTATTGATTATCAGTGTCACACTGTGAAACAAAAACCACAGCAAGTCAT---TTTTTTAAACAGGAGTAAGAATTGTATAAAATTATATGTAATATATAAATAGTGACATGCACACAGAATATCACCTCAATT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80611188 611 + 95678458 -----AAGTTTATGACGGAGTTCCTGATGGGTTAAAACGTGGTGGAACTAGATCATATGCATTCCTTCTCACACAGTACAAACGTCGTAACATGATAAAATATTTTTCAAAAAAGTAAAATCTTAGCCCACATGCTTATCTACTGAAAAATCAGTGTACTTCATGGTGCTAACACAATATATAAG-----ACAATTATAATACACTGAATATAAAATTATTTTATCGAATATCACCACCAACACAATTTTTTAGACATAGAAAAGTGAATTTACATTTACTTACAGCAATTCCCTATTTAAGGATAATTACTTTTAGATTTAT---TTTAAAGAGAAATGTTTAAACATTTCTTCTGCGTATTTGAGCATTGTTATGACAAGCTGAGTTCTGAGAGTCTAATCCTGTTTGGGCATTCAAATGTAAGCTAAT--TTTTTTTAATAAACGAGTAATTCAATTTCTTCTGAAAATATGTGGTTTCATTTTCTCAGAGTGTCAAAGTGCCAAAAAAAGGAATTACGAAAGGCATCGTTTGTATATATAACATGATCATGTACTGATTATCAGTGTCACACTGTGAAACAAAAACCAGAGCAAGTCAT---TTTTTAAAACAGGAGTAAGAATT---------------------------------------------------------- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81038001 610 - 96509753 -----AAGTTTATGACGGAGTTCCTGATGGGTTAAAACGTGGTGGAACTAGATCATATGCATTCCTTCTCACACAGTACAAACGTGGTAACATGACAAAATATTTTTCAAAAAAGTAAAATCTTAGCCCACATGCTTATCTACTGAAAAATCAGTGTACTTCATGGTGCTAACACAATATATAAG-----ACAATTATAATATACTGAATATAAAATTATTTTATCGAATATCACCACCAACACAATTTTTTAGACATAGAAAAGTGAATTTACATTTACTTACAGCAATTCCCTATTTAAGGATAATTACTTTTAGATTTAT---TTTAAAGAGAAATGTTTAAACATTTCTTCTGCGTATTTGAGCATTGTTATGACAAGCTGAGTTCTGAGAGTCTAATCCTGTTTGGGCATTCAAATGTAAGCTAA---TTTTTTTAATAAACGAGTAATTCAATTTCTTCTGAAAATATGTGGTTTCATTTTCTCAGAGTGTCAAAGTGCCAAAAAAAGGAATTACGAAAGGCATCGTTTGTATATATAACATGATCATGTACTGATTATCAGTGTCACACTGTGAAACAAAAACCAGAGCAAGTCAT---TTTTTAAAACAGGAGTAAGAATT---------------------------------------------------------- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76296144 611 + 90941950 -----AAGTTTATGACGGAGTTCCTGATGGGTTAAAACGTGGTGGAACTAGATCATATGCATTCCTTCTCACACAGTACAAACGTGGTaacatgacaaaatatttttcaaaaaagtaaaatcttagCCCACATGCTTATCTACTGAAAAATCAGTGTACTTCATGGTGCTAACACAATATATAAG-----ACAATTATAATatactgaatataaaattattttatcgaATATCACCACCAACACAATTTTTTAGACATAGAAAAGTGAATTTACATTTACTTATAGCAATTCCCTATTTAAGGATAATtacttttagatttat---tttaaagagaaatgtttaaacatttcttctgcGTATTTGAGCATTGTTATGACAAGCTGAGTTCTGAGAGTCTAATCCTGTTTGGGCATTCAAATGTAAGCTAAC--tttttttAATAAACGAGTAATTcaatttcttctgaaaatatGTGGTTCCATTTTCTCAGAGTGTCAAAGTACCaaaaaaaGGAATTACGAAAGGCATCGTTTGTACATATAACATGATCATGTACTGATTATCAGTGTCACACTGTGAAACAAAAACCAGagcaagtcat---tttttaaaacaggagtAAGAATT---------------------------------------------------------- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18564935 608 + 33263144 taaataaGTTTATGATGGAGTTCCTGATGGGTTAAAACATGGTGGAAC-------TATGCATTCCTTCTCACACAGTACAAACGTGGTAACATGATAAAATATTTTTCAAAAAAGTAAAATCTTAGCCCACATGCTTATCTACTGAAAAATCAGTGCACTTCATGGTGCTAACACAATATATAAG-----ACAATTATAATATACTGAATATAAAATTATTTTATCGAATATCACCACCAACACAATTTTTTAGACATAGAAAAGTGAATTTACATTTACTTACAGCAATTCCCTGTTTGAGGACAATTACTTTTAGATTTAT---TTTAAAGAGAAATGTTTAAACATTTCTTCTGCATATTTGAGCATTGTTATAACAAGGTGAGTTCTGAGAGTCTAATCCTGTTTGGGCATTCAAATGTAAGCTAAC--TTTTTTTAATAAACGAGTAATTCAA-TTCTTCTGAAAATATGTGGTTCCATTTTCTCAGAGTGACAAAGTGCCAAAAAAAGGAATTACGAAAGGCATCGTTTGTATATATAACATGATCATGTACTGATTATCAGTGTCACACTGTGAAACAAAAACCAGAGCAAGTCAT---TTTTTAAAACAGGAGTAAGAATT---------------------------------------------------------- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198266875 672 + 210400635 TAAAAATGTTTACGATGGAGTTCATGATGGGTGAAAACTTGGTGGAATTAAATCATATATATTCCTTCTCAAAGAGTACAAGTGTGATAACATGATAAAATATTTTTCAAAAAAGTAAAATCGTAGCCCACATGCTTATCTACTG-AAAATCAGTGGACTTTATGGTGCTAAAACAATATACAAG-----ACAATTACAATATATTGAATATAAGATTATTTTATCTAATATCACCACCAACACAATTTTTTAGACATAGAAAAGTCAATTTACATTTACTTAGATTAATTCCCTACTTAAGGATAATTACTTTTAGATTTAT---TTTAAAGAGAAATGCCTAAACATTTATTCTGCATAGTTGAATATTGTCATGGCAAGCCAAATTCTGAGAGTCTAATCCTGTTTTGGCATTCAAATGTAAGCTAACA-TTTTTTTAATAAACTAGTAATTCAATTTCTTCTGAAAATATGTGGTTCCATTTTCTC--AGTGTCAAAGTGCCACAAAAAGGAATTATGAAAGGCATCATTTGTATACATAACATGATCATGTACTGATTATCAATGTCACACTGTGAAACAAAAACCACAGCAATCCAT---TTTTTAAAACAGGAGTAAGAATTAGATAAAATTATATGTAATATATAAATAGTGACATGCACACAGAATATCACCTCAATT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40887900 661 - 69331447 TATAAATGTTTATAATGGAGTACATGATGGATTAAAACTTAGCGGAATTAGATCATGTGAATTCCTTCTTAAAGGGTAAATGCCCTA-AACATGATCAAATAATTTTCTAAGAAGTGAAATCTTGGCCCATATGCTTATTTATTG-AAAATCGGGGTATTTCACATTGCTGAAAGAACACACTAGAAGGAACACTTGTGATATACTGAAT-----ATTATTTTATCTAATGACACTACTAG-ACAATTTTTTGGGCATGGAAAATTGAATTTACATCTCTGTGGAACAATTCACTAGTCAAGAAAAATTACTTTTAGATTTAGACATTTAA--AAAAATGCTTATACATTTCTTTTGTGTATTTGAATACTGCTATGATAACCCAAATTCTGAGGCTCTAGCCCTGTTTGGGCATTTAAATGTAAATGAACA-TTTTTTTCCCCAACTAATAATTCAATTTTTTCACAAAATGTCTAGTTCCATTTTCTCAGTAGGTCAAAGTGCTACAAAAAGGCATTACAAAAGGCATCCTTTGCATATGTAATATCATCATAAACTGA-------TATCACAC--TGAAACAAAAACCATAGCAAGTCACTTATTTTTTAA----GAGTAAGAAAT-AGAAAAATTATATATAATGTA-AAACTGTGAAACACATACAGAAGATCACACCAATT i canFam3.chr10 C 0 I 191 e mm10.chr15 77118980 3626 + 104043685 I a score=953112.000000 s hg38.chr22_KI270876v1_alt 115066 285 + 263666 TTTTAA----------------------AACTTTATACCTGAGTGATTATTTTAACGTTCA-TTTAGAATGAAAGAAATTTGTTAGTATGCTCAAGCTAGAG-TCCTAGGTTAAAAGTTGAAGAGTAAGTAGAAGCTAAGATGGTTAAGACTCTCTATGGATGTCTTTTTTTTTTT-------A-----AATCACCATTTGCATGGAGAAgcaggaa-aaaagcacttgact----gacagcagacttcctaaggcccagctctgtaaccagctagctgtaactt-----gctcaaatcacttaacaccactgacctcagctgtaaa--------agaa s panTro4.chr22 34493040 285 + 49737984 TTTTAA----------------------AACTTTATACCTGAGTGATTATTTTAACGTTCA-TTTAGAACGAGAGAAATTTGTTAGTATGCTCAAGCTAGAGTTCCTAGGTTAAAAGTTGAAGAGTAAGTAGAAGCTAAGATGGTTAAGACTCTCTATGGATGTCTTTTTTTTTTT-------------AATCACCATTTGCAtggagaagcaggaa-aaaagcacttgact----gacagcagacttcctaaggcccagctctgtaaccagctagctgtaactt-----gctcaaatcacttaacactactgacctcagctgtaaa--------agaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30908948 301 + 46535552 TTTTAA----------------------AACTTTATACCTGAGTGATTATTTTAACGTTCA-TTTAGAATGAGAGAAATTTGTTAGTATGCTCAAGCTAGAGTTCCTAGGTTAAAAGTTGAAGAGTAAGTAGAGGCTAAGATGGTTAAGACTCTCTATGGATGTCttttttttttttttttttt-----aatCACCATTTGCAtggagaagcaggaa-aaaagcacttgact----gacagcggacttcctgaggcccagctctgtaactagctagctgtaactt-----gctcgaatcacttaacactactgacctcagctgtaaaagggaggtagaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100461619 296 - 115148730 TTTTAA----------------------AACTTTATACCCGAGTGATTATTTTAATATTCA-TTTAGAATGAGAGAAATTTGTTAGTATGCTCAAGCTAGAGTTCCTAGGTTAAAAGTTGAAGAGTAAGTAGAAGCTAAGATGGTTAAGACTCTCTATGGATGTCTTTTTTTTTTT-----TTT-----AATCACCATTTGCAtggagaagcaggaa-aaaagcacttgact----gacagcagacttcctgaggcccagctctgtaaccagctagctgtaactt-----gctcaaatcacttaacactactgacctcagctgtaaaagggaggtagaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80611799 295 + 95678458 ----------------------------AACTTTATACCTGAGTGATTATTTTAATGTTCA-TTTACAATGAGAGAAATCTGTTAGTATGCTCAAGCTAGAGTTCCTAGGTTAAAAGCTGAAGGGTAAGTGGAAACTAAGATGGTTAAGACTCTCTATGGATGTCTGTTTTTTTTTTTTTTTTT-----AATCACCATTTGCATGGAGAAgcaggaa-aaaagcacttgact----gagagcagacttcctgaggcccagctctgtaaccagctagctgtaactt-----gctcaaatcacttaacactactgacctcagctgtaaatgggAGGCAGAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81038611 295 - 96509753 ----------------------------AACTTTATACCTGAGTGATTATTTTAATGTTCA-TTTAGAATGAGAGAAATCTGTTAGTATGCTCAAGCTAGAGTTCCTAGGTTAAAAGCTGAAGAGTAAGTGGAAACTAAGATGGTTAAGACTCTCTATGGATGTCTGttttttttttttttttt-----AATCACCATTTGCATGGAGAAgcaggaa-aaaagcacttgact----gagagcagacttcctgaggcccagctctgtaaccagctagctgtaactt-----gctcaaatcacttaacactactgacctcagctGTAAATGGGAGGCAGAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76296755 297 + 90941950 ----------------------------AACTTTATACCTGagtgattattttaatattca-tttagaATGAGAGAAATCTGTTAGTATGCTCAAGCTAGAGTTCCTAGGTTAAAAGCTGAAGAGTAAGTGGAAACTAAGATGGTTAAGACTCTCTATGgatgtctgtttgtttgtttttttttt---aaatcaccatttGCATGGAGAAGCAGGAA-AAAAGCACTTGACT----GAGAGCAGACTTCCTGAGGCCCAGCTCTGTAACCAGCTAGCTGTAACTT-----GCTCAAATCACTTAACACTACTGACCTCAGCTGTAAATGAGAGGCAGAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18565543 300 + 33263144 ----------------------------AACTTTATACCTGAGTGATTATTTTAATTTTCA-TTTAGAATGAGAGAAATCTGTTAGTATGCTCAAGCTAGAGTTCCTAAGTTAAAAGTTGAAGAGTAAGTGAAAACTAAGATGGTTAAGACTCTCTATGGATGTCTGttttttttttttttttttttCTAATCACCATTTGCATGGAGAGgcaggaa-aaaagcacttgact----gagagcagacttcctgaggcccagctctgtaaccagctagctgtaactt-----gctcaaatcacttaacactactgacctcagctGTAAATGGGAGGCAGAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198267547 305 + 210400635 TTTAAA----------------------AACTTTATACCTGGATTATTATTTTAATGTTCATTTTAGAACGAGAGAAATTTGTTAGTATGTTTAAGCTAGAGTTATTAGGTTAAAAGTTGAAGAGTAAGTGGAAGCTAAGATGA-TAAGATGCTCTATGAATGTCTTTTTTTTTTT-TTTTTCC-----AATCACCATTTGCAtggagaagcaggaagaaaagcacttgactgagagagagcaaacttccagaagcccagctctgtaaccagctgggtgtaactt-----gctcaaatcacttaacactgctgacctcagctgtacaagggaggcataa i calJac3.chr1 C 0 C 0 s canFam3.chr10 40888752 305 - 69331447 tcttaaaaaaaaAAACCACTTTATCCTTAACTGTATGCTTTCTTTAACATTTTAACGTACATTTTAGAATGAAAGAAATCTGTTTATATGTTCCAGGTGGAGTTCTTAGGTTTAAAGACAAAGAATCAATGGAAGCTAAGAAGACCA----TCTCTGTGGATGTCTTTTATTTTTC-----------------ATTATTTGCATGGGGAATCAGaaa-aaaagcacctggct----gaaaacagatttcctgagttccggctctattactagctagctgtaacattccgggctcaagttacttaaaactgttgacctctgttgtaaaagga-------- i canFam3.chr10 I 191 I 26 e mm10.chr15 77118980 3626 + 104043685 I a score=48866.000000 s hg38.chr22_KI270876v1_alt 115351 17 + 263666 gatGCTTTTAAAAATGC s panTro4.chr22 34493325 17 + 49737984 gatgcttttaaaaatgc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30909249 17 + 46535552 gatgcttttaaaaatgc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100461915 17 - 115148730 gatgcttttaaaaatgc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80612094 17 + 95678458 GATGCTGTTAAAAATGC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81038906 17 - 96509753 GATGCTGTTAAAAATGC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76297052 17 + 90941950 GATGCTGTCAAAAATGc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18565843 17 + 33263144 GATGCTGTTAAAAATGC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198267852 17 + 210400635 gatgatttttaaaatgc i calJac3.chr1 C 0 C 0 e mm10.chr15 77118980 3626 + 104043685 I e canFam3.chr10 40889057 26 - 69331447 I a score=530378.000000 s hg38.chr22_KI270876v1_alt 115368 303 + 263666 -TTTTTAggccgtgcgcggtggctcacacctgtaatcccagcactttgggaggctgaggcaggtggatcacaaggtcaggagatcgggaccatcctggctaacatggtgaaacccagtctctactaaaaatacaaaaaattagccaggcgt------------------------------ggtggtgggcacctgtggtcccagctactcaggaggctgaggcaagagaatggcgtgaac------------------------------------------------------------ccgggaggcggaacttacagtgagccgagatcacgccactgca------------------------------------------ctccagcctgggtaacagagtaagactctgtctc------------aaaaaaaaaaaaaaGT s panTro4.chr22 34493342 303 + 49737984 -tttttaggccgtgcgcggtggctcacgcctgtaatcccagcactttgggaggctgaggcaggtggatcacgaggtcaggagatcgggaccatcctggctaacatggtgaaacccagtctctactaaaaatacaaaaaattagccaggcgt------------------------------ggtggcgggcacctgtggtcccagctactcaggaggctgaggcaggagaatggcgtgaac------------------------------------------------------------ccgggaggcggaacttacagtgagccgagatcacgccactgca------------------------------------------ctccagcctgggtaacagagtaagactccgtctc------------aaaaaaaaaaaaaagc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30909266 302 + 46535552 -tttttaggccgcgcgaggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggtggatcacgaggtcaggagattgggaccatcctggctaacatggtgaaacccagtctctactaaaaatacaaaaaattagctgggcgt------------------------------ggtggcgggcacctgtggtcccagctactcaggaggctgaggcaggagaatggcgtgaac------------------------------------------------------------ccgggaggcggagcttgcagtgagccgagatcacgccactgca------------------------------------------ctccagcctaggtaacagagcaagactccgtctc-------------aaaaaaaaaaaaaGC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100461932 302 - 115148730 -tttttaggccgtgcgcggtggctcacgcctgtaatcccagcactttgggaggctgaggcaggtggatcacgaggtccggagatcgagaccatcgtggctaacatggtgaaacccagtctctactaaaaatacaaaaaattacccgggtgt------------------------------ggtggtgggcaactgtggtcccagctactcacgaggctgaggcaggagaatggcgtgaat------------------------------------------------------------ccgggaggcggagcttgcagtgagccgagatcacgccactgca------------------------------------------ctccaacctgggtaacagagcaagactccgtctc-------------aaaaaaaaaaaaaGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80612111 311 + 95678458 TTTTTTAggctgggtgtgggggctcacgcctgtaatcccagcacttcgggaggctaaggcgggcagatctcgaggtcaggagatcaagacactcctggctaacatggtgaaaccccgtctctactaaaaatacaaaaaattaggcgggtgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn------------------------------------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn-------------------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctcaaa---------------------------a-------aaaaaaaaaaaaaaaaAAAGC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81038923 306 - 96509753 TTTTTTAggctgggtgtgggggctcacgcctgtaatcccagcacttcgggaggctaaggtgggcagatctcgaggtc---agatcgagacactcctggctaacacagtgaaaccccgtctctactaaaaacacaaaaaattagccgggtgt------------------------------ggtggcaggagcctgtggtcccagctactcgggaggctgaggcaggagaatggcaagaac------------------------------------------------------------ccgggaggtggagcttgtggtgagccgagattgcgccaccgca------------------------------------------ctccagcctgggcgacagagcaaggctccatctc-------aaaaaaaaaaaaaaaaaaaGC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76297069 304 + 90941950 ttttttaggctgggtgtgggggctcacgcctgtaatcccagcacttcgggaggctaaggcgggcagatctcgaggtcaggagatcgagacactcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaattagccgggtgt------------------------------ggtggcaggagcctgtggtcccagctactcgggaggctgaggcaggagaatggcaagaac------------------------------------------------------------ccgggaggtggagcttgcggtgagccgagattgcgccaccgca------------------------------------------ctccagcctgggcgacagagcaaggctccatctc------------aaaaaaaaaaaaaagc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18565860 316 + 33263144 TTTTTTAggctgggtgtgggggctcacgcctgtaatcccagcactttgggaggccgaggcgggcagatctcgaggtcaggagatcaagacactcctggctaacaaggtgaaaccccgtctctactaaaaatacaaaaaattagctgggtgt------------------------------ggtggcgggagcctgtggtcccagctactcgggaggctgaggcaggagaatggcaagaac------------------------------------------------------------ccgggaagtggagcttgcggtgagctgagactgctccactgca------------------------------------------ctccagcctgggcaacagagcaaggctctgtctcaaaaaaaaaaaaaaaaaaaaaaaaaaGC i chlSab2.chr19 C 0 C 0 e mm10.chr15 77118980 3626 + 104043685 I e canFam3.chr10 40889057 26 - 69331447 I e calJac3.chr1 198267869 0 + 210400635 C a score=3276.000000 s hg38.chr22_KI270876v1_alt 115671 1 + 263666 T s panTro4.chr22 34493645 1 + 49737984 t i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30909568 1 + 46535552 T i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100462234 1 - 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80612422 1 + 95678458 T i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81039229 1 - 96509753 T i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76297373 1 + 90941950 t i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18566176 1 + 33263144 T i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198267869 1 + 210400635 t i calJac3.chr1 C 0 C 0 e mm10.chr15 77118980 3626 + 104043685 I e canFam3.chr10 40889057 26 - 69331447 I a score=268682.000000 s hg38.chr22_KI270876v1_alt 115672 86 + 263666 TTTTAGCTTTAAACTTCATCAGTTCTGATCAGAGTTTACTCATTTTCAAGAGGTAGTATAAAGTATTTATGAAAAATG----------TAAACAGG s panTro4.chr22 34493646 85 + 49737984 ttttagctttaaacttcATCAGTTCTGATCAGAGTTTACTCATTTTCAAGAGGTAGTATAAAATATTTATG-AAAATG----------TAAACAGG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30909569 86 + 46535552 TTTTAGCTTTAAACTTCATCAATTCTGATCAGAGTTTACTCATTTTCAAGAGGTAGTATAAAACATTTATGAAAAATG----------TAAACAGG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100462235 86 - 115148730 TTTTAGCTTTAAACTTCGTCAATTCTGATCAGAGTTTACTCATTTTCAAGAGGTAGTATAAGACACTTACGAAAAATG----------TAAACAGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80612423 85 + 95678458 TTTTAGCTTTAAACTTCATCAATTCGGATCAGAGTTTACTCA-TTTAAAGAGGTAGTATAAAATATTTATAAAACATG----------TAAAGAGG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81039230 84 - 96509753 TTTTAGCTTTAAACTTCATCAATTCTGATCAGAGTTTACTCA-TTTAAAGAGGTAGTATAAAATATTTATAAAACATG----------TAAAGA-G i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76297374 85 + 90941950 ttttagcTTTAAACTTCATCAATTCTGATCAGAGTTTACTCA-TTTAAAGAggtagtataaaatatttataaaacatg----------taaAGAGG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18566177 85 + 33263144 TTTTAGCTTTAAACTTCATCAATTCTGATCAGAGTTTACTCA-TTTAAAGAGGTAGTATAAAACATTTATAAAACATG----------TAAAGAGG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198267870 85 + 210400635 ttttagctttaaacttcatcaattctaATCAGAGCTTACTCA-CTTCAAGAGGTAATATAAAATAGTTATGAAAAATG----------TAAACAGG i calJac3.chr1 C 0 C 0 s canFam3.chr10 40889083 93 - 69331447 ttttagctttaaaactccgtgattctaATC--AGTTTACTGA-TTTCAAAAAGTAGTACAAAATATTTTTGAAAACTGCACAACTCTTTAGACAGG i canFam3.chr10 I 26 C 0 e mm10.chr15 77118980 3626 + 104043685 I a score=819034.000000 s hg38.chr22_KI270876v1_alt 115758 264 + 263666 TT---AAAAAAAT---TGCCCCTAAA-TAATCCTTACTACTTCATCATCCTTG-CCCTAAGCTGTG-AGA---GCAGTAAGGGGCAGCGGAGCACAGCATTAACGCGCCTAGCAATTTTTTAGTTTAGTTTCCCTT------------GGGCATTAGGAG---------------------------------------------------------TAAGT----------------AGGTAAGTAAATAAACCAAGGCATGCAAAGAGAAGAAGCAACAGTCATGGAGTTAGCAATATTAAC-ATGTGCTGAAAGGATGTCTTGAGTCTTATATGATCCAAAGGGCAATTTTCT----CTATTC s panTro4.chr22 34493731 264 + 49737984 TT---ACGAAAAT---TGCCCCTAAA-TAATCCTTACTACTTCATCATCCTTG-CCCTAAGCTGTG-AGA---GCAGTAAGGGGCAGCGGAGCACAGCATTAACGCGCCTAGCAATTTTTTAGTTTAGTTTCCCTT------------GGGCATTAGGAG---------------------------------------------------------TAAGT----------------AGGTAAGTAAATAAACCAAGGCATGCAAAGAGAAGAAGCAACAGTCATGGAGTTAGCAATATTAAC-ATGTGCTGAAAGGATGTCTTGAGTCTTATATGATCCAAAGGGCAATTTTCT----CTATTC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30909655 266 + 46535552 TTA--AAAAAAAT---TGCCCCTAAA-TAATCCTTACTACTTCATCATCCTTG-CCCTAAGCTGTG-AGA---GCAGTAAGGGGCAGCAGAGCACAGCATTAACGCGCCTAGCAATTTTTTAGTTTAGTTTCCCTT------------GGGCATTAGGAG---------------------------------------------------------TAAAT----------------AGGTAAGTAAATAAACCAGGGCATGCAAAGAGAAGAAGCAACAGTCATGGAGTTAGCAATATTAACAATGTGCTGAAAGGATGTCTGGAGTCTTCTATGATCCAAAGGGCAATTTTCT----CTATTC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100462321 265 - 115148730 TT---AAAAAAAT---TGCCCCTAAA-TAATCCTTACTACTTCATCATCCTTG-CCCTAAGCTGTG-AGA---GCAGTAAGGGGCAGCTGAGCACAGCACTAACGCGCCTAGCAATTTTTTAGTTTACTTTCCCTT------------GGGCATTAGGAG---------------------------------------------------------TAAGT----------------AGGTAAGTAAATAAACCAAGGCATGCAAAGAGAAGAAGCAACAGTCATGGAGTTAGCAATATTAAAAATGTGCTGAAAGGATGTCCTGAGTCTTATATGATCCAAAGGGCAATTTTCT----CTATTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80612508 259 + 95678458 TT---TTAAAAA----TGCCCTTAAA-TAATCCTT-----TATGTCATCCTTG-CCCTAAGCTGTG-AGA---GCAGTAACAGGCAACGGAGCACAGCATTAATGCGCCTAGCAATTTTTTAGTTTAGTTTCCCTT------------GGGCATTAGGAG---------------------------------------------------------TAAGT----------------AGGTAAGTAAATAAAACAAGGTATACAAAGAGAAGAAGCAACAGTCATGGAGTTAGCAATATTAACAACGTGCTGAAAGGGTGTCTTGAGTCTTATATGATCCACAGGGCAATTTTCT----CTATTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81039314 259 - 96509753 TT---TAAAAAA----TGCCCTTAAA-TAATCCTT-----TATGTCATCCTTG-CCCTAAGCTGTG-AGA---GCAGTAACAGGCAACGGAGCACAGCATTAATGCGCCTAGCAATTTTTTAGTTTAGTTTCCCTT------------GGGCGTTAGGAG---------------------------------------------------------TAAGT----------------AGGTAAGTAAATAAAACAAGGTATACAAAGAGAAGAAGCAACAGTCATGGAGTTAGCAATATTAACAACGTGCTGAAAGGGTGTCTTGAGTCTTATATGATCCACAGGGCAATTTTCT----CTATTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76297459 259 + 90941950 TT---TAAAAAA----TGCCCCTAAA-TAATCCTT-----TATGTCATCCTTG-CCCTAAGCTGTG-AGA---GCAGTAACAGGCAGCAGAGCACAGCATTAATGCGCCTAGcaattttttagtttagtttccCTT------------GGGCATTAGGAG---------------------------------------------------------TAAGT----------------aggtaagtaaataaaacaaggtatacaaagagaagaagcaaCAGTCATGGAGTTAGCAATATTAACAACGTGCTGAAAGGGTGTCTTGAGTCTTATATGATCCACAGGGcaattttct----ctattt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18566262 317 + 33263144 TT---TAAAAAA----TGCCCCTAAA-TAATCCTT-----TACGTCATCCTTGCCCCTAAGCTGTG-AGA---GCAGTAATGGGCAGTGGAGCACAGCATTAATGTGCCTAGCAATTTTTTAGTTTAGTTTCCCTT------------GGGCATTAGGAGTAAGTAGGTAAGTAAATAAACCAATTTTTTACTTTAGTTTCCCTTGGGCATTAGGAGTAAGT----------------AGGTAAGTAAATAAACCAAGGTACGCAAAGAGAAGAAGCAACAGTCATGGAGTTAGCAATATTAACAATGTGCTGAAAGGGTGTCTTAAGTCTTATATGATCCACAGGGCAATTTTCT----CTATTT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198267955 265 + 210400635 TTGTTAAAAAAAC--ACGCCTCTAAA-TAATCCTTACTACTTCCTCTTTCTTG-CCCTAAGCTGTG-AGA---GCAGTAAGGCGCAACAGAGCACAGCATTAATGTGCCTACCAACTTTTTAGTTTACTTTCTTTT------------GGACATTAGAAG---------------------------------------------------------TAAA--------------------TAAATAAATAAACCAAGGCATGCAAAGAGAAGGAGCAACAGTCATGAAGTTCGCAATATAAACAATGTGCTGAAAGGATGTCTTGAATCTTATATGATCCAAAGGGCAATATTCT----CTATTA i calJac3.chr1 C 0 C 0 s mm10.chr15 77122606 256 + 104043685 TT---TAAAAAGT---T---CCTAAA-TATTCATTATAGTCTTATCACCCTTG----TGATATGTG-AGATGTGGAAGATGGGTTGGTAAGCCACAGCACTGCTGTTTCTAGTAATTTTTTGGCTGGGTCTCTTTA------------AGTGACAAGGGC------------------------------------------------------------------------------AGGCAAGTGAGGAAGTTATGGTGTGCCCAG---CAGAGCAGCAGGTATGGAGACAATTCCAT-AACTATGTGCCACAATAGTATCTTGGCTCCTACATGGTCTAAA-GACATTTTTTTTTTCCTATTG i mm10.chr15 I 3626 C 0 s canFam3.chr10 40889176 293 - 69331447 TT---AAGAAAAACCATATCCCTAAATTAATCACTAGTGCTTCTTTATCCTGG-TCCTAACAGGGACAGA---GCAGGAAGGAGCAGCAGAGCACAAAATTACCATTTCTAGCACTGCTTAGATGTAGTTGCTTTTGGCAGGGAAGGGGGGTGGTGGGGG---------------------------------------------------------CAGGTAAGTAAAAGCAAATAAAAGTAAATAAATGAATGAAGACACGCAAGG--GAGAAGCAGCAATAATGAGGCTAACAATATTAACAATATGCTGAAAGG-TGTCTTGAGTGT--CATGAACCCAAAGGCAATTTTCT----CTGTTT i canFam3.chr10 C 0 I 226 a score=1878525.000000 s hg38.chr22_KI270876v1_alt 116022 604 + 263666 AAAAATACCCATGCATAATTCTAAATT-----------------------------TGGTTTTCTGTGGCAACTCTCACATTCTCAAACCAGGTGATAGCTTCCTTATGGATCCAGCTTGGAAACTGCCAAACTACTCATAGACATCAAAATTTTGGAGCTAAAGGACAGATGTAATTATTTTTAAGGGTAAATTGATACAGG----ATATATATATTTTATGTAGGCTCAATGTACCCTGCCTTTTATT---ACTTTGAGGGAAAAATAAGAGCCACTCTTGGAAAAGTGGATGGCTGAATGAATAAATTCCTCCGTAGTCCAAGACCTC-TACATCTAGCCTGGAAACAGAACATGCTAATGACACCTACACTGTGGGCTGAAGGTAATATAGCCCAACAATACATAGTATGATAGACTGTGGCCCCCCTTCTTCCCATTATGTTCTAGAAATACTCATTTGGGCAAATGATCCCACTGTTAAGGGCT----ATACCTTCTTGGCTACGTTT-TAGTGCATCACTAATCTGCAAGGCACCTTCAACTGTTATC---AGATAAAGAAGTCAATGGGCAATACCA--------------ATTGA-----TAATAGAGAAGTGAAAGAAAAATTGGCTTAAACTCCAGAGAAGGGGTGTGTAGaaaagc s panTro4.chr22 34493995 604 + 49737984 AAAAATACCCATGCATAATTCTAAATT-----------------------------TGGTTTTCTGTGGCAACTCTCACATTCTCAAACCAGGTGATAGCTTCCTTATGGATCCAGCTTGGAAACTGCCAAACTACTCATAGACATCAAAATTTTGGAGCTAAAGGACAGATGTAATTATTTTTAAGGGTAAATTGATACAGG----ATATATATATTTTATGTAGGCTCAATGTACCCTGCCTTTTATT---ACTTTGAGGGAAAAATAAGAGCCACTCTTGGAAAAGTGGATGGCTGAATGAATAAATTCCTCCGTAGTCCAAGACCTC-TACATCTAGCCTGGAAACAGAACATGCTAATGATACCTACACTGTGGGCTGAAGGTAATATGGCCTAACAATACATAGTATGATAGACTGTGGCCCCCTTTCTTCCCATTATGTTCTAGAAATACTCATTTGGGCAAATGATCCCACTGTTAAGGGCT----ATACCTTCTTGGCTACGTTT-TAGTGCATCACTAATCTGCAAGGCACCTTCAAGTGTTATC---AGATAAAGGAGTCAATGGGCAATACCA--------------ATTGA-----TAATAGAGAAGTGAAAGAAAAACTGGCTTAAACTCCAGAGAAGGGGTGTGCAGAAAAGC i panTro4.chr22 C 0 I 10 s ponAbe2.chr22 30909921 604 + 46535552 AAAAATACCCATGCATAATTCTAAATT-----------------------------TGGTTTTCTGTGGCAACTCTCACATTCTCAAACCAGGTGATAGCTTCCTTATGGATCCAGCTTGGAAACTGCCAAACTACTCATAGACATCAAAATTTTGGAGCTAAAGGACAGATGTAATTATTTTTAAGGGTAAATTGATACAGG----ATATATATATTTCATGTAGGCTCAATGTACCCTGCCTTTTATT---ACTTTGAGGGAAAAATAAGAGCCACTCTTGGAAAAGTAGATGGCTGAATCAATAAATTCCTCTGTAGTCCAAGACCTC-TACATCTAGCCTGGAAACAGAACACGCTAATGACATCTACACTGTGGGCTGAAGGTAATATGGCCCAACAATACATAGTATGATAGACTGTGGACCCCCTTTTTCCCATCATGTTCTAGAAATACTCATTTAGGCAAATGATCCCACTGTTAAGGGCT----ATACCTTCTAGGCTACGTTT-TAGTGCATCACTAATCTGCAAGGCACCTTCAAGTGTTATC---AGATAAAGGAGTCAATGGGCAATTCCA--------------ATTGA-----TAATAGAGAAGTGAAAGAAAAATTGGCTTAAACTCCAGAGAACGGGTGCGTAGAAAAGC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100462586 637 - 115148730 AAAAATACCCATGCATAATTCTAAATTTAAAAAAAAATTTTTTTTTTAATTTTTTCTAAATTTCTGTGGCAACTCTCACATTCTCAAACCAGGTGATAGCTTCCTTATGGATCCAGCTTGGAAACTGCCAAACTACTCATAGACGTCAAAATTTTGGAGCTAAAGGACAGATGTAATTATTTTTAAGGGTAAATGGATACAGG----ATATATATATTTTATGTAGGCTCAATGTACCCTGCCTTTTATT---ACTTTGAGGGAAAAATAAGAGCCACTCTTGGAAAAGTGGATGGCTGAATGAATAAATTCCTCTGTAGTCCAAGACCCC-TACATCTAGCCTGGAAACAGAACATGTTAATGATACCTACACTGTGGGCTGAAGGTAATATGGCCCAACAATACACAGCATGATAGACTGTGGCCCCCTTTTTTCCCATTATGTTCTAGAAATACTCATTTGGGCAAATGATCCCACTGTTGAGGGCTATACATACCTTCTTGGCTACGTTT-TAGTGCATTACTAATCTGCAACGCACCTTCAAGTGTTATC---AAATAAAGGAGTCAATGGGCAATTCCA--------------ATTGA-----TAATAGAGAAGTGAAAGAAAAATTGGCTTAAACTCCAGAGAAGGGGTTTGTAGAAAAGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80612767 552 + 95678458 AAAAACACCCATGCATAATTCTAAATT-----------------------------TGGTTTTCTGCGGCAACTCTCACATTCTCAAACCAGGTGACAGCTTCCTTATGGATCCAGCTTGGAAACTGCCATACTACTCACAGGCATCAACACTTTGGAGCTAAAGGACAGATGTAATTATTTTTAAGGGTAAACTGATACAGG--ATATATATATATTTTATGTAGGCTCAATGTACTCTGCCTTTTATT---ACTTTAA-GAAAAAATAAGAGCCACTCTTGGAAAAGTGGATGGCTGAACGAATAAATTCCTCTGTAGTCCAAGGCCTC-TACATCCAGCCTGGAAACAGAACATGCTAATGATACCCACACTGTGGGCT----------------------------------------------CCTTTTTTCCCATTATATTCTTGAAATACTCATTTGGACAAATGATCCCACTGTTAAGGGCT----ATACCTTCTTGGCTATGTTT-TAGTGCATCACTAATCTGCAAGGCACCTTCAAGTGTTATC---AGATACAGGAGTCAATGGGCAATTCCA--------------ACTGA-----TAGTA-------GAAAGAAAAATTGGCTTAAACTCCAGAGAAGGGGTGTGTAGAAAAGC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81039573 552 - 96509753 AAAAACACCCATGCATAATTCTAAATT-----------------------------TGGTTTTCTGCGGCAACTCTCACATTCTCAAACCAGGTGACAGCTTCCTTATGGATCCAGCTTGGAAACTGCCATACTACTCACAGGCATCAACACTTTGGAGCTAAAGGACAGATGTAATTATTTTTAAGGGTAAACTGATACAGG--ATATATATATATTTTATGTAGGCTCAATGTACTCTGCCTTTTATT---ACTTTAA-GAAAAAATAAGAGCCACTCTTGGAAAAGTGGATGGCTGAACGAATAAATTCCTCTGTAGTCCAAGGCCTC-TACATCCAGCCTGGAAACAGAACATGCTAATGATACCCACACTGTGGGCT----------------------------------------------CCTTTTTTCCCATTATATTCTTGAAATACTCATTTGGACAAATGATCCCACTGTTAAGGGCT----ATACCTTCTTGGCTATGTTT-TAGTGCATCACTAATCTGCAAGGCACCTTCAAGTGTTATC---AGATACAGAAGTCAATGGGCAATTCCA--------------ACTGA-----TAGTA-------GAAAGAAAAATTGGCTTAAACTCCAGAGAAGGGGTGTGTAGAAAAGC i macFas5.chr10 C 0 I 681 s papAnu2.chr10 76297718 552 + 90941950 aaaaacaccCATGCATAATTCTAAATT-----------------------------TGGTTTTCTGCGGCAACTCTCACATTCTCAAACCAGGTGACAGCTTCCTTACGGATCCAGCTTGGAAACTGCCAAACTACTCACAGGCATCAACACTTTGGAGCTAAAGGACAGATGTAATTATTTTTAGGGGTAAACTGATAcagg--atatatacatattttatgtaggCTCAATGTACTCTGCCTTttatt---actttaa-gaaaaaataagagccaCTCTTGGAAAAGTGgatggctgaatgaataaattcctcTGTAGTCCAAGGCCTC-TACAtccagcctggaaacagaacATGCTAATGATACCCACACTGTGGGCT----------------------------------------------CCTTTTTTCCCATTATATTCTTGAAATACTCATTTGGACAAATGATCCCACTGTTAAGGGCT----ATACCTTCTTGGCTATGTTT-TAGTGCATCACTAATCTGCAAGGCACCTTCAAGTGTTATC---AGATACAGGAGTCAATGGGCAATTCCA--------------ACTGA-----TAGTA-------GAAAGAAAAATTGGCTTAAACTCCAGAGAAGGGGTGtgtagaaaagc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18566579 553 + 33263144 AAAAACACCCATGCATAATTCTAAATT-----------------------------TGGTTTTCTGCGGCAACTCTCACATTCTCAAACCAGGTGATAGCTTCCGTATGGATCCAGCTTGGAAACTGCCAAACTACTCACAGGCATCAACATTTTGGAGCT-AAGGACAGATGTAATTATTTTTAAGGGTAAATTGATACAGGATATATATATATATTTTATGTAGGCTCAATGTACTCTGCCTTTTATT---ACTTTGA-GAAAAAATAAGAGCCACTCTTGGAAAAGTGGATGGCTGAACGAATAAATTCCTCTGTAGTCCAAGGCCTC-TACATCTAGCCTGGAAACAGAACATGCTAATGATACCCACACTGTGGGCT----------------------------------------------CCTTTTTTCCCATTATGTTCTCAAAATATTCATTTGGGCAAATGATCCCACTGTTAAGGGCT----ATACCTTCTTGGCTACGTTT-TAGTGCATCACTAATCTGCGAGGCACCTTCAAGTGTTATC---AGATACAGGAGTCAATGGGCAATTCCA--------------ACTGA-----TAGCA-------GAAAGAAAAATTGGCTTAAACTCCAGAGAAGGGGAGCGTAGAAAAGC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198268220 604 + 210400635 AAAACTAACCATGTATAGTTCTAAATT-----------------------------TGGTTTTCTGTGGCAACTCTCACATTCTCAAACCAGGCTATATCTTCCTTATGGATCCAGCTTGGAAACTGTCAAACTACTCATAGGCATCAAAATATTGGAGCTGAAGGACAGATGTAATTATTTTTAAGGGTAAACTGATACAGG----ATATATCTATTTTATGTAGGCTCAATGTATTCTGCCTTTTATT---ACTTTGAGGGAAAAATAAGAGCCACTCTTGGAAAAGTGGATGGCTGGATGAATAAACTCCTCTGTTATCCAGGACCTC-TATGTCTAGCCTAGAAATAGAACATGCTAATGATATCTACACTGTGGGCTGAAGGTAATATGGCCCAACATTGCAAGGTATGATAGACTGGGGTCTCATTTTTTCCCACTATGTTCTAGAAATACTCATTTGGGCAAATGATCCCACTGTTAAGGGCT----ATAACTTCTTGGCTATGTTT-TAGTGGGTCACTAATCTGCAAGGCACCTTCAAGTATTATC---AGATAAAGGAGTCAATGGGTAATTCCA--------------AATGA-----TAGTAGAGAAGTGAAAGAGAAATTGGATTAAACTCCAGAGAAAGGGTGTGTGGAAGAGC i calJac3.chr1 C 0 C 0 s mm10.chr15 77122862 500 + 104043685 -------------------TCTGAGTG-----------------------------TAGCATTCTGTGGCAACTCTTG-ATTTTCAAACTAGGAAATGAATAACCTACTTGCCCA-CACTGAGACAGCCAAACTACTCAGAGGCATCGAAACTCAGAAGGTGAAAGATACAAAACATTCTTGTTATGAGTACACTGACAAAGG----ATGTGGGTATTTTATGTAAACTTAATGTATTCTACCTACTTTTTAGGTTTTGA--GGAAGACAAGACTCA------------TGGGTGCCTGAG-----------------AAGTGAAAGTCTC-TAATGACAGACCAG-----GAGCATGCTAATGACAGCTATGATGCAGGCTGAAGGTAAGAGGACCCAGCGACATAAAACATCAAAGA----------------------------------------ACTGAAGCAGCCCAGCTGGCTGGTAAGTGCC----ACACGTT---GGTTGTACTGATAGCAGGCCAACGACCTGCAAGGCACCATTCAGAGTTATCATTAGATAAA----------GGCAAGTCTA--------------AGTGT-----TAGTA-AGTCAACCATGAGAAAGTGGCTTTGATTCCAGAGAGATGGGACACAGCAAAGC i mm10.chr15 C 0 C 0 s canFam3.chr10 40889695 512 - 69331447 AAAAAATTCCATGCCTGGCTCTGAGTG-----------------------------TGGTTTTCTGCAGCAACTCTCACACTTTCAGACCCGCCTATAGTTTGCTCACAGATCTA-----------------------------------------------------------------------------------ACAAG---------TGTGGTTTATGCAGGCTCAACATTGTTTCCCCTTTATT---ACTCTGAAGGGAAAATGAGGGACTCTCTTTGAAGAATGGATAGTCAGATGAAAAAATTCCTCTGTGTCTCAGGCCTTCTTAATTCTGGCTTAGAAATAGA-TATACTAATGATGTCCACACTCCAGGCTGAGGGTAATATGGCCCCACAACACACCATGTGAAAGGTTGGA------------CCCGCCATGTTTTAGAAATCCTCACTTGGGCAAATAGACCCA-TGATACAGGCT----GTCACTTCTTGGCTATGTTT-TAGTGGGATATCAATCCACAAGGCTCTTGC-------------AAGTAAGGGAGTCAGTGGGTAATTTCATGGAGGCTGGTTAGACTGATCTTCTGATAGAGAAGGGAGAGAAAAGCTGGCTTTAACTCCAGAGAAAGGGTGCACAACAAAGT i canFam3.chr10 I 226 C 0 a score=458770.000000 s hg38.chr22_KI270876v1_alt 116626 172 + 263666 aaaaaaaaaaaaaaaaaaaaaaaaaaTCCTCTGAGCATAATGGTCAACAGGG-----------------------------GCTTT-------CCAGTGAGGAGGGTTATAAAATCTAC---------AGCTGACTAATATAGTAAT-AAAGTGGGCCAC-TCAGCTATTTGCTCAAATCTCTACTTTCAACTCACCAA----------CAAATATTTCAAAGGATGCT s panTro4.chr22 34494609 172 + 49737984 aaaaaaaaaaaaaaaaaaaaaaaaaaTCCTCTGAGCATAATGGTCAACAGGG-----------------------------GCTTT-------CCAGTGAGAAGGGTTATAAAATCTAC---------AGCTGACTAATATAGTAAT-AAAGTGGGCCAC-TCAGCTATTTGCTCAAATCTCTACTTTCAACTCACCAA----------CAAATATTTCAAAGGATGCT i panTro4.chr22 I 10 C 0 s ponAbe2.chr22 30910525 158 + 46535552 -----------AAAAGAAAAAAAAAATCCTCTGAGCATAATGGTCAACAGGG-----------------------------GCTTT-------CCAATGAGGAGGGTTATAAAATCTAC---------AGCTGACTAATATAG---T-AAGGTGGGCCAC-TCAGCTATTTGCTCAAATCTCTACTTTCAACTCACCAA----------CAAATATTTCAAAGGATCCT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100463223 156 - 115148730 -------------AAAAAAAAAAAAATCCTCTGAGCATAATGGTCAACAGGG-----------------------------GCTTT-------CCAATGAGGAGGGTTATAAAATCTAC---------AGCTGACTAATGTAG---T-AAGGTGGGCCGC-TCAGCTATTTGCTCAAATCTCTACTTTCAACTCACCAA----------CAAATATTTCAAAGGATCCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80613319 167 + 95678458 --aaaaaaaaaaaaaaaaaaaaaaaaTCTTCTGAGCATAATGGGCAACAGGG-----------------------------GCTTG-------CCAATGAGGAGGGTTATAAAATCTAC---------AGCTGACTAATATAG---T-AAGGTGGGCCAC-TCAGCTATTTGCTCAAATCTCTACTTTCCACTCACCAA----------CAAATATTTCAAAGAATCCT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81040806 169 - 96509753 aaaaaaaaaaaaaaaaaaaaaaaaaaTCCTCTGAGCATAATGGGCAACAGGG-----------------------------GCTTG-------CCAATGAGGAGGGTTATAAAATCTAC---------AGCTGACTAATATAG---T-AAGGTGGGCCAC-TCAGCTATTTGCTCAAATCTCTACTTTCCACTCACCAA----------CAAATATTTCAAAGAATCCT i macFas5.chr10 I 681 C 0 s papAnu2.chr10 76298270 158 + 90941950 -----------aaaaaaaaaaaaaaatcctctgagcATAATGGGCAACAGGG-----------------------------GCTTG-------CCAATGAGGAGGGTTATAAAATCTAC---------AGCTGACTAATATAG---T-AAGGTGGGCCAC-TCAGCTATTTGCTCAAATCTCTACTTTCCACTCACcaa----------caaatatttcaaagaatCCT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18567132 153 + 33263144 ----------------AAAAAAAAAATCCTCTGAGCATAATGGGCAACAGGG-----------------------------GCTTG-------CCAATGAGGAGGGTTACAAAATCTAC---------AGCTGACTAATATAG---T-AAGGTGGGCCAC-TCAGCTATTTGCTCAAATCTCTACTTTCGACTCACCAA----------CAAATATTTCAAAGAATCCT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198268824 133 + 210400635 -------------------AAAAAGATTCTCTGAGCACAATGGACAACAGGG-----------------------------GCTTG-------CCAATAAGGAGGGTTATAAAATCTAC---------AGC---------------------TGGGCCAC-TAGGCTATTTCCTCAAATCTCTACTTGCGACTCAACAA----------CAAGTATTTCAAAGGATCCT i calJac3.chr1 C 0 C 0 s mm10.chr15 77123362 150 + 104043685 ---------------------AAAGGCCCTATGAGGATGGAGGGAGGTTGAG----------------------------CTCCTG-------TCACTAGAGTGTGTGCTGAGACCTGCCCACAGTAGACTTGGCTAATGTAT---G-AAGAAAT---------GCTATTTCCTCAGTGTTCTACCTTTAACTCACCAG----------CAACTCTGTGCCACACTCTT i mm10.chr15 C 0 C 0 s canFam3.chr10 40890207 185 - 69331447 -------------------GAAAAAA----CTGAGGATGGTGGAGAGCATGGAGTCCTAGTTATCTTTAATTCAGAGGTGTGCCTGAAGGCAACCGCTGGGGAGG---------TCTAC---------AGCTGATCAAGACAG---TAAAGGCAGGCCTCTTCAGCTATGCCTTCCAATTTCTGCTTTAGAGTCATCAACAATTCTGTTCAAATACTTCAAAAGATGTT i canFam3.chr10 C 0 I 45 a score=1473931.000000 s hg38.chr22_KI270876v1_alt 116798 482 + 263666 TAGCTCTTTAGAGTATAAAATTCCAAATTC--------------TTTGGCCTTGAATTCAAAGTCCTCTATAATTTAG-CTTTATCAGCCTCTC-TTATTGAGCATTATTGCTTCAGAAGAGAGCCTTCTGTTCCAACTAAAGATACTGTAAGCAAAACATCATGCTGTACAACAGTATAAATACATACAA----T----CTTGTCAACTTAAAAA-AACTTC----------TTAAtttttattttttaatgtttagcaatggggtcttgccttgttacccaggctagtctctaactcctggactcaagtgatcctcccacctcagcctccctaagtgctgagattacaggtatgatccactgtgcctggccTACAAAGAAAAGAATCTTCTATTTACATCCCCACCTCCATGTG----GGAAaccctttt-aactcttaaacatgactgaggattcagagagctttttgtttctttaggtaatatccattgttatttatggcattagaaattgaagctga s panTro4.chr22 34494781 482 + 49737984 TAGCTCTTTAGAGTATAAAATTCCAAATTC--------------TTTGGCCTTGAATTTAAAGTCCTCTATAATTTAG-CTTTATCAGCCTCTC-TTATTGAGCATTATTGCTTCAGAAGAGAGCCTTCTGTTCCAACTAAAGATACTGTAAGcaaaacatcatgctgtacaacagtataaatacatacaa----t----cttgtcaacttaaaaa-aaCTTC----------TTAAtttttattttttaatgtttagcaatggggtcttgccttgttacccaggctggtctctaactcctggactcaagtgatcctcccacctcagcctccctaagtgctgagattacaggtatgatccactgtgcctggccTACAAAGAAAAGAATCTTCTATTTACATCCCCACCTCCATGTG----GGAAaccctttt-aactcttaaacatgactgaggattcagagagctttttgtttctttaggtaatatccattgttatttatggcattagaaattaaagctga i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30910683 482 + 46535552 TAGCTCTTTAGAGTATAAAATTCCAAATTC--------------TTTGACCTTTAATTCAAAGTCCTCTATAATTTAG-CTTTATCAGTCTCTC-TTATTGAGCATTATTGCTTCAGAAGACAGCCTTCTGTTCCAACCAAAGATACTGTAAGCAAAACATCATGCTGTACAACAGTATAAATACATACAA----T----CTTGTCAACTTAAAAA-AACTTC----------TTAAtttttattttttaatgtttagcaatggggtcttgccatgttacccaggctggtctctaactcctggactcaagtgatcctcctacctcagcctccctaagtgctgagattacaggtatgatccactgtgcctggccTACAAAGAAAAGAATTTTCTATTTACATCCCCACCTCCATGTG----GGAAaccctttt-aactcttaaacatgactgaggattcagagagctttttgtttctttaggtaatatccattgttatttatggcattagaaattaaagctga i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100463379 468 - 115148730 TAGCTCTTTAGAGTATAAAATTCCAAATTC--------------TTTGGCCTTGAATTCAAAGTACTCTATAATTTAG-CTTTATCAGCCTCTC-TTATTGAGCATTATTGCTTCAGAAGAGAGCTTTCTGTTCCAACTAAAGATACTATAAGcaaaacatcatgctgtacaacagtataaatacatacaa----t----cttgtcaacttaaaaa-aaCTTC----------TTAAtt--------------tttagcaatggggtcttgccatgttacccaggctggtctctaactcctggactcaagtgatcctccgacctcagcctccctaagtgctgagattacaggtatgatccactgtgcctggccTACAAAGAAAAGAATCTTCTATTTACATCCCCACCTCCGTGTG----GGAAaccctttt-aactcttaaacatgactgaggattcagagagctttttgtttctttaggtaatatccattgttatttatggcattagaaattaaagctga i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80613486 477 + 95678458 TAGCTCTTTAGAGTATAAAATTCCAAATTC--------------TTTGGCCTTGAATTCAAACTCCTCCATAATTTAG-CTTTATCAGTCTCTC-TTATTGAGCATTATTGCTTCAGAAG--AGCCTTGTGTTCCAACCAAAGATACTGTAAGCAAAACATCATGCTGTACAACAGCATAAATGCATACAA----T----CTTGTCAACTTAAAAA-----TC----------TTAATttttattttttaatttttagcgatggggtcttgccatgttacccaggctggtctctaactcctggactcaagtgatcctcccacctcagcctccctaagtgctgagattacaggtatgatccactgtgcctggccTACAAAGAAAAGAACCTTCTGTTTACATCCCCACCTCCATGTG----AGAAacccttttcaactcttaaacacgactgaggattcagagggctttttgtttctttagctaatatccattgttatttatagcattagaaattaaagctga i rheMac3.chr10 C 0 I 1029 s macFas5.chr10 81040975 477 - 96509753 TAGCTCTTTAGAGTATAAAATTCCAAATTC--------------TTTGGCCTTGAATTCAAACTCCTCCATAATTTAG-CTTTATCAGTCTCTC-TTATTGAGCATTATTGCTTCAGAAG--AGCCTTGTGTTCCAACCAAAGATACTGTAAGCAAAACATCATGCTGTACAACAGCATAAATGCATACAA----T----CTTGTCAACTTAAAAA-----TC----------TTAATttttattttttaatttttagcgatggggtcttgccatgttacccaggctggtctctaactcctggactcaagtgatcctcccacctcagcctccctaagtgctgagattacaggtatgatccactgtgcctggccTACAAAGAAAAGAACCTTCTGTTTACATCCCCACCTCCATGTG----AGAAacccttttcaactcttaaacacgactgaggattcagagggctttttgtttctttagctaatatccattgttatttatagcattagaaattaaagctga i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76298428 477 + 90941950 TAGCTCTTTAGAGTATAAAATTCCAAATTC--------------TTTGGCCTTGAATTCAAACTCCTCCATAATTTAG-CTTTATCAGTCTCTC-TTATTGAGCATTATTGCTTCAGAAG--AGCCTTGTGTTCCAACCAAAGATACTGTAAGcaaaacatcatgctgtacaACAGCATAAATGCATACAA----T----CTTGTCaacttaaaaa-----tc----------ttaatttttattttttaatttttagcgatggggtcttgccatgttacccaggctggtctctaactcctggactcaagtgatcctcccacctcagcctccctaagtgctgagattacaggtatgatccactgtgcctggcctacaaagAAAAGAACCTTCTGTTTACATCCCCACCTCCATGTG----AGAAACCCTTTTCAACTCTTAAACACGACTGAGGATTCAGagggctttttgtttctttagctaATATCCATTGTTATTTATAGCATTAGaaattaaagctga i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18567285 481 + 33263144 TAGCTTTTTAGAGTATAAAATTCCAAATTC--------------TTTGGCCTTGAATTCAAACTCCTCCATAATTTAG-CTTTATCAGTCTCTC-TTATTGAGCATTGTTGCTTCAGAAG--AGCCTTGTGTTCCAACCAAAGATACTGTAAGCAAAACATCATGCTGTACAACAGCATAAATGCATACAA----T----CTTGTCAACTTAAAAA-----TC----------TTAATttttattttttaatttctagcaatggggtcctgccatgttacccaggctggtctctaactcctggactcaagtgatcctcccacctcagcctccctaagcgctaagattacaggtatgatccactgtgcctggccTACAAAGAAAAGAACCTTCTGTTTACATCCCCACCTCCATGTGGGAAAGAAacccttttcaactcttaaacacgactgaggattcagagagctttttgtttctttagctaatatccattgttatttatagcattagaaattaaagctga i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198268957 478 + 210400635 TAGCTACTTAGAGTATAAAATTCCAACTTC--------------TTTGGCCTTGAATTCAAATTCTTTTACAATTTTG-CTTTATCAGCCTCTCATTATCAAGTGTTATTGCTTCAGAAG--AACCTTCTGTTCCAACCAAAGATACTGTACGcaaaacatcatgctatacaacagcataaatatatacaa----tcttacttgtcaattaaaaaaaaaCTTC----------TTAATttttatttttttatt--------tggggtcttgccatgttacccaggctagtctgtaactcctgagctcaagtaatcctcccacctcagtctccctaagtgctgggattataggtatgctccactgtgcttggccTACAAAGAAAAGAACTTTCTATTTACATCCCTCCCTCCATGTG----Ggaaaccctttc-aactcttaaacacaactgaggattcagagagctttttgcttctttgggtaatatccattgttatttaaagcattagaaattaaagctga i calJac3.chr1 C 0 C 0 s mm10.chr15 77123512 404 + 104043685 --ATTCATCAGAAAATCAAACTCCAACTTTACAGTGACATGCTACTGGGCCTTACA-TCTAGGCCCACTACAGCTGAGTCTCTACCAAGCTCAC---ACTGAGCATGGTTGTTTCAGAAG--AGCCT--TGTTCACACCAAATACACTGCACTCAGAACATCATGCTGTA----ACTTTAAGCATGTACCAAGTTT----ATCATCAAC--AGAAA-GGCTTCGATGTACAATCTTACTTCTACTCTCTAttttttaatgaccgggtttagctgtgctattcaggctggtctccaact------------tgattttcctgcacctgtgt-cttaagggctgggattataaggat-------------tgcactacaa-------------------------------------g----cccgATCCCTTTCAACTTT------------ACGTTACAAAGTATATCCTGTGGATTT-----ATACCTATTAGTATTTAC--CATTGTGA----------- i mm10.chr15 C 0 C 0 e canFam3.chr10 40890392 45 - 69331447 I a score=1068074.000000 s hg38.chr22_KI270876v1_alt 117280 460 + 263666 taaatttttaaagtatttaaaaat-taattttaaata------ataagccaat-tatgtgttaatgtaaataacata-ttttaaagaaaattaactacattttccaaaacgtaataaatttacttagaagactggcactcctttTAATGTATGGATTTA--ctattacagtatgttattttaacttaagtatacaaagaaaaatctggcctcacagatagctagaaaagggaaaagtatttcaatagccttctcagaaaactgtgga--gtcttctttgataatacatcaaaacttgacaagtggt----------------------------------------------------------------------------------------actttcttaaaa-gttaactgcaatgtcgaatctgaaaccttatcagtgaacttttca---tatgttattacactaaaatccactggacaatcatgcactttgcatgaatcttttactca----tgattttgtaaca-ttaaacctcagtcattatttgtaaaatatcggcttact s panTro4.chr22 34495263 460 + 49737984 taaatttttaaagtatttaaaaat-taactttaaata------ataagccaat-tacgtgttaatgtaaataacata-ttttaaagaaaattaactacattttccaaaacgtaataaatttacttagaagactggcaCTCCCTTTAATGTATGGATTTA--ctgttacagtatgttattttaacttaagtatacaaagaaaaatctggcctcacagatagctagaaaagggaaaactatttcaatagccttctcagaaaactgtgga--gtctcctttgataatacatcaaaacttgacaagtggt----------------------------------------------------------------------------------------actttcttaaaa-gttaactgcaatgtcgaatctgaaaccttatcagtgaacttttca---tatgttattacagtaaaatccactggacaatcatgcactttgcatgaatcttttactca----tgattttgtaaca-ttaaacctcagtcattatttgtaaaatatcggcttact i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30911165 462 + 46535552 taaatttttaaagtatttaaaaat-taattttaaata------ataagccaat-tacgtgttaatgtaaataacata-ttttaaagaaaattaactacactttccaaaacgtaataaatttacttagaagactggcaCTCCCTTTAATGTAtggatttactctgttacaatatgttattttaacttaagtatacaaagaaaaatctggcctcacagatacctagaaaagggaaaagtatttcaatagccttctcagaaaactgtgga--gtcttctttgataacacatcaaaacttgacaagtggt----------------------------------------------------------------------------------------actttcttaaaa-gttaactgcaatgtcgaatctgaaaccttatcagtgaacttttca---tatgttattacactaaaatccactggacaatcatgcactttgcatgaatcttttactca----tcattttgtaaca-ttaaacatcagtcattatttgtaaaattttggcttact i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100463847 462 - 115148730 taaatttttaaagtatttaaaaat-taattttaaata------ataagccaat-tacgtgttcatgtaaataacata-ttttaaagaaaattaacaacattttccaaaatgtaataaatttacttagaagactggcaCTCCCTTTAACGTAtggatttactctgttacaatatgttattttaacttaagtatacaaagaaaaatctggcctcacagacagctagaaaagggaaaagtatttcaatagccttctcagaaaactgtgga--gtcttctttgataatacatcaaaacttgacaagtggt----------------------------------------------------------------------------------------actttcttaaaa-gttaactgcaatgtcaaatctgaaaccttatcagtgaacttttca---tatgttattacactaaaatccactggacaatcatgcactttgcatgaatcttttactca----tgattttgtaaca-ttaaacatcagtcattatttgtaaaatatcggcttact i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81041452 452 - 96509753 gcaattttaaaagcatataaacat-taattttaaata------ataagccaat-tacatgttaatgtaaataacatatttttaaagaaaattaactacattttccaaaatgtaataaatttacttagaagactggcaCTCCCTTTAATGTAtggatttactctgttacaatatgttattttagtttaagtatacaaagaaaaatctggcctcacagatagttggaaaaggggaaactatttcaatagccttctcagataactgtgga--gtcttctttgataatatatcaaaacttgacgagtggt----------------------------------------------------------------------------------------actttcttaaaa-gttaactacaatgtcgaatctgaaaccttatcagtgaacttttca---tatgttattacactaaaatccattggacaat-----------catggatcttttactca----tgattttgtaaca-ttaaacatcagtcattagttgtaaaataccggcttact i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76298905 462 + 90941950 gcaattttaaaagtatttaaaaat-taattttaaata------ataagccaat-tacatgttaatgtaaataacata-ttttaaagaaaattaactacattttccaaaatgtaataaatttacTTAGAAGACTGGCACTCCCTTTAATGTATGGATTTACTCTGTTACAATATGTTATTTTAGTTTAAGTATACAAAGAAAAATCTGCCCTCACAGATAGTTGGAAAAGGGAAAACTATTTCAATAGCCTTCTCAGATAACTGTGGA--GTCTTCTTTGATAATATATCAAAACTTGACGAGTGGT----------------------------------------------------------------------------------------ACTTTCTTAAAA-GTTAACTACAATGTCGAATCTGAAACCTTATCAGTGAACTTTTCA---TATGTTATTACACTAAAATCCATTGGACAATCATGCACTTTGCATGGATCTTTTACTCA----TGATTTTGTAACA-TTAAACATCAGTCATTAGTTGTAAAATATCGGCTTACT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18567766 462 + 33263144 gcaattttagaagtatttaaaaat-taattttaaata------ataagccaat-tacatgttaatgtaaataacata-ttttaaagaaaattaactacattttccaaaatgtaataaatttacttagaagactggcaCTCCCTTTAATGTACGGatttactctgttacagtatgttattttagcttaagtatacaaagaaaaatctggcctcacagatagctggaaaagggaaaactatttcaatagccttctcagacaactgtgga--gtcttctttgataatacatcaaaacttgacgagtggt----------------------------------------------------------------------------------------actttcttaaaa-gttaactacaatgtcgaatctgaaaccttatcagtgaacttttca---tatgttattacactaaaatccattggacaatcatgcactttgcatggatcttttactca----tgattttgtaaca-ttaaacattagtcattagttgtaaaatatcggcttact i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198269435 456 + 210400635 gaaaatttaaaattatttaaaaat-taattttaaata------attaatttatattaacattaatataaataacata-tttgaaagaaaattaactgtattttccaaaatgtaataaatttacttataagactggcactccctttaatatatgcatttactctgttataatatattattttaacttaagtatacaaagaaaaatctcgcctcacagataactggaaaagggaaacgtatttcaattgccttctcagataattgggg-----catctttgataata---caacacttggcaagtggt----------------------------------------------------------------------------------------actttcttaaaaggttaactgcaatgtcgaatctgaaaccttatcagcgaaattttc-----atgttattacactaaaatccactggacaatcatgcacttcgcatggatcttttactta----tgattttggaacatttaaacataagtca-catttgtaaaatattggcttact i calJac3.chr1 C 0 C 0 s mm10.chr15 77123916 483 + 104043685 ---------GAAATATTTTAAAACAGAAATTTACATAGCAGTCACAAGCCTAC-T--GTTTTCAT-------------TTTTATGAAAAGTTAACT--ATTTTCCAAAATA----ACACTTAGTTA-AATATTAGTGATCTCCACAACATGAGCATTTGTTCTGTT-TGATACGTTGTTCTGA--------------------------CCCATAGACTGCTGAG-----------------aacagtcctcttggaaaactgtgggttattatcttcgataacatacccacatttgacaagtggtggcttctCGCTGGTGATGGACTCTGGGGCCTATCTCACATGCACTAAGGAGGCAAACATTCGACCACTGAGCTAGCATGCTCaatagcagtctctagaag-gctgatggcaatgtc-------aaaccaggccaataaacttctcaggctat-ttcttaagctactgttgactagacaaccaagtaacttgtgtgcatctttcattcatgcgtgattttataaca-ttcaatatttgtaaatgg-tgaaaactattggtttact i mm10.chr15 C 0 I 961 e canFam3.chr10 40890392 45 - 69331447 I e rheMac3.chr10 80613963 1029 + 95678458 I a score=508804.000000 s hg38.chr22_KI270876v1_alt 117740 219 + 263666 gagttacggagctctttcaaatgtgaggacattgcattatacaagaccacatttgttactatcatcacggatctcatcagaaaaaatctttaagtactgagaaactgtcgagctcatagtggaggacacaaatttttcaa------aattctaatttctaccaggagagcttacattttaccaatggaaaaaaat--agtgtcagtttcttcccttgaagtggcagg s panTro4.chr22 34495723 219 + 49737984 gagttatggagctctttcaaatgtgaggacattccattatacaagaccacatttgttactatcatcacggatctcatcagaaaaaatctttaagtactgagaaactgtcaagctcatagtggaggatacaaatttttcaa------aattctaatttctaccaggagagcttacattttaccaatggaaaaaaat--agtgtcagtttcttcccttgaagtggcagg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30911627 219 + 46535552 gagttatggagctctttcaaatgtgaggacattccattatacaagaccacatttgttactgtcatcacggatctcatcagaaaaaatctttaagtactgagaaactgtcaagctcatagtggaggatacaaatttttcaa------aattctaatttctaccaggagagcttacattttaccaatggaaaaaaat--agtgtcagttttttcccttgaagtgacagg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100464309 219 - 115148730 gagttatggagctctttcaaatgtgaggacattccattgtacaagaccacatttgttactatcatcacggatctcatcagaaaaaatctttaagtactgagaaactgtcaagcccatagtggaggatacaaatttttcaa------aattctaatttctaccaggagagcttacaatttaccaacggaaaaaaat--agtgtcagttttttcccttgaagtgacagg i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81041904 219 - 96509753 gagttcaggagatctttcaaatgtcaggacatttcattatacaagaccacatttgttactatcatcacagatctcatcagaaaaaatctttaagtactgagaaactgccaagctcatagtggaggatacaaatttttcaa------aattctaatttttgccaggagagtttacattttaccaatgggaacaaat--agtgtcagttttttcccttgaagtgacagg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76299367 219 + 90941950 GAGTTCTGGAGATCTTTCAAATGTCAGGACATTTCATTATACAAGACCACATTTGTTACTATCATCACAGATCTCATCAGAAAAAATCTTTAAGTACTGAGAAACTGTCAAGCTCATAGTGGAGGatacaaatttttcaa------aattctaatttttgccaGGAGAGTTTACATTTTACCAATGGGAACAAAT--AGTGTCAGTTTTTTCCCTTGAAGTGACAGG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18568228 225 + 33263144 gatttctggagatctttcaaatgtcaggacatttcattatacaagaccacatttgttactatcatcacagatctcatgagaaaaaatctttaggtactgagaaactgtcaagctcatagtggaggatacaaatttttcaaaattctaattctaatttttgccaggagagtttacattttaccaatggaaacaaat--agtgtcagttttttcccttgaagtgacagg i chlSab2.chr19 C 0 I 28 s calJac3.chr1 198269891 218 + 210400635 gagttatggagttctttcagatgtcagcacatgtcattatacaagaccacatttgttactatcatcactgatctcatcag--aaaatctttaagtactgagaaattgtcaagctcacagtggaggatacaaatttttcaa------aattctaatttttgccaggtgagcttacattttaccaatggaaacaaataaagtgtcagttttttctc-tgaagtgacaga i calJac3.chr1 C 0 C 0 e mm10.chr15 77124399 961 + 104043685 I e canFam3.chr10 40890392 45 - 69331447 I e rheMac3.chr10 80613963 1029 + 95678458 I a score=41255.000000 s hg38.chr22_KI270876v1_alt 117959 23 + 263666 cccacttcattttcaagaaaatg s panTro4.chr22 34495942 23 + 49737984 cccacttcattttcaagaaaatg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30911846 23 + 46535552 cccacttcattttcaagaaaatg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100464528 23 - 115148730 cccacttcattttcaagaaaatg i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81042123 23 - 96509753 cttacttcattttcaagaaaatg i macFas5.chr10 C 0 I 2 s papAnu2.chr10 76299586 23 + 90941950 CTTacttcattttcaagaaaatg i papAnu2.chr10 C 0 I 520 s calJac3.chr1 198270109 23 + 210400635 cccacttcattttcaaaaaaata i calJac3.chr1 C 0 C 0 e mm10.chr15 77124399 961 + 104043685 I e canFam3.chr10 40890392 45 - 69331447 I e rheMac3.chr10 80613963 1029 + 95678458 I e chlSab2.chr19 18568453 28 + 33263144 I a score=1910.000000 s hg38.chr22_KI270876v1_alt 117982 2 + 263666 GT s panTro4.chr22 34495965 2 + 49737984 GT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30911869 2 + 46535552 GT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100464551 2 - 115148730 GT i nomLeu3.chr7b C 0 C 0 s calJac3.chr1 198270132 2 + 210400635 gt i calJac3.chr1 C 0 C 0 e mm10.chr15 77124399 961 + 104043685 I e canFam3.chr10 40890392 45 - 69331447 I e rheMac3.chr10 80613963 1029 + 95678458 I e papAnu2.chr10 76299609 520 + 90941950 I e macFas5.chr10 81042146 2 - 96509753 I e chlSab2.chr19 18568453 28 + 33263144 I a score=600.000000 s hg38.chr22_KI270876v1_alt 117984 1 + 263666 G s panTro4.chr22 34495967 1 + 49737984 G i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30911871 1 + 46535552 G i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100464553 1 - 115148730 G i nomLeu3.chr7b C 0 C 0 e mm10.chr15 77124399 961 + 104043685 I e canFam3.chr10 40890392 45 - 69331447 I e calJac3.chr1 198270134 0 + 210400635 C e rheMac3.chr10 80613963 1029 + 95678458 I e papAnu2.chr10 76299609 520 + 90941950 I e macFas5.chr10 81042146 2 - 96509753 I e chlSab2.chr19 18568453 28 + 33263144 I a score=6825.000000 s hg38.chr22_KI270876v1_alt 117985 5 + 263666 TATAA s panTro4.chr22 34495968 5 + 49737984 TATAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30911872 5 + 46535552 TATAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100464554 5 - 115148730 TATAA i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 15465939 5 + 96509753 TATAA i macFas5.chr10 n 2 C 0 s papAnu2.chr10 14640341 5 - 90941950 TATAA i papAnu2.chr10 n 520 C 0 e mm10.chr15 77124399 961 + 104043685 I e canFam3.chr10 40890392 45 - 69331447 I e calJac3.chr1 198270134 0 + 210400635 C e rheMac3.chr10 80613963 1029 + 95678458 I e chlSab2.chr19 18568453 28 + 33263144 I a score=12122.000000 s hg38.chr22_KI270876v1_alt 117990 12 + 263666 TGTAAATACTTT s panTro4.chr22 34495973 12 + 49737984 TGTAAATACTTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30911877 8 + 46535552 TGTAAA----TT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100464559 8 - 115148730 TGTAAA----TA i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 15465944 12 + 96509753 TGTAAATACTTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 14640346 12 - 90941950 tgtaaatacttt i papAnu2.chr10 C 0 C 0 s calJac3.chr1 12128874 12 - 210400635 TGTAAATACTTC i calJac3.chr1 n 0 C 0 e mm10.chr15 77124399 961 + 104043685 I e canFam3.chr10 40890392 45 - 69331447 I e rheMac3.chr10 80613963 1029 + 95678458 I e chlSab2.chr19 18568453 28 + 33263144 I a score=440861.000000 s hg38.chr22_KI270876v1_alt 118002 143 + 263666 CTTTCTTTTTCTTAGTTTGATGTAATTAGAATCATTTACTTAGGAGACATAGCATGTTATTGAGTCTTTCACTTAAATATAAGGTTTTCCTAACTGGATAATTAGGAAAATAAAATACATTTATTTCCCCTTATACACTCTTC s panTro4.chr22 34495985 143 + 49737984 CTTTCTTTTTCTTAGTTTGATGTAATTAGAATCATTTACTTAGGAGACATAGCATGTTATTGAGTCTTTCACTTAAATATAAGGTTTTCCTAACTGGATAATTAGGAAAATAAAATACATTTATTTCCCCTTATACACTCTTC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30911885 143 + 46535552 CTTTCTTTTTCTTAGTTTGATGTAATTAGAATCATTTACTCAGGAGACATAGCATGTTATTGAGTCTTTCACTTAAATATAAGGTTTTCCTAACTGGATAATTAGGAAAATAAAATACATTTATTTCCCCCTATACACTCTTC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100464567 142 - 115148730 CTTTCTTTTTCTTAGTTTGATGTAATCAGAATCACTTACTCAGGAGACATAGCATGTTG-TGAGTCTTTCACTTAAATACAAGGTTTTCCTAACTGGATAATTAGGAAAATAAAATACACTTATTTCCCCTTATACACTCTTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 15061380 143 - 95678458 CTTTCTTTTTCTTAGTTGGATGTAATTAGAATCATTTACTTAGGAGACATGGCATGTTATTGAGTCTTTCACTTAAATATAAGGTTTTCCTAACTGGATAATTAGGAAAATAAAATACATCTATTTCCCCTTATACACTCTTC i rheMac3.chr10 n 1029 I 433 s macFas5.chr10 15465956 139 + 96509753 ----CTTTTTCTTAGTTGGATGTAATTAGAATCATTTACTTAGGAGACATGGCATGTTATTGAGTCTTTCACTTAAATATAAGGTTTTCCTAACTGGATAATTAGGAAAATAAAATACATCTATTTCCCCTTATACACTCTTC i macFas5.chr10 C 0 I 1 s papAnu2.chr10 14640358 139 - 90941950 ----ctttttcttagttgGATGTAATTAGAATCATTTACTTAGGAGACATGGCATGTTATTGAGTCTTTCACTTAAATATAAGGTTTTCCTAACTGgataattaggaaaataaaatacatctatTTCCCCTTATACACTCTTC i papAnu2.chr10 C 0 I 1 s chlSab2.chr19 14693045 143 - 33263144 CTTTCTTTTTCTTAGTTTGATGTAATTAGAATCATTTACTTAGGAGACACGGCATGTTATTGAGTCTTTCACTTAAATATAAGGTTTTCCTAACTGGATAATTAGGAAAATAAAACACATTTATTTCCCCTTATACACTCTTC i chlSab2.chr19 n 28 I 1 s calJac3.chr1 12128886 136 - 210400635 -------CTTCTTAGTTTGATGTAATTAGAATCATTTACTTAGGAGACAAAGCATGTTATTGAGTCTTTCACTTAAATATAAGGTTTTCCTAACTGGATAATTAGGAAAATAAAATACATTTATTTCCCCTTACACACTCTTT i calJac3.chr1 C 0 I 4 e mm10.chr15 77124399 961 + 104043685 I e canFam3.chr10 40890392 45 - 69331447 I a score=161496.000000 s hg38.chr22_KI270876v1_alt 118145 53 + 263666 AAACATAATTTAGAGCTACCTTCTTTTAAATCAAAATATCAGTCCTTAAATAA s panTro4.chr22 34496128 53 + 49737984 AAACATAATTTAGAGCTACCTTCTTTTAAATCAAAATATCAGTCCTTAAATAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30912028 53 + 46535552 AAACATAATTTAGAGCTACCTTCTTTTAAATCAAAATATCAGTCCTTAAATAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100464709 53 - 115148730 AAACATAATTCAGAGCTACCTTCTTTTAAATCGAAATATCAGTCCTTAAATAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 15061956 53 - 95678458 AAACATAATTTAGGGTTACCTTATTTTAAATCAAAGTATCAGTCCttaaataa i rheMac3.chr10 I 433 C 0 s macFas5.chr10 15466096 53 + 96509753 AAACATAATTTAGGGTTACCTTATTTTAAATCAAAGTATCAGTCCTTAAATAA i macFas5.chr10 I 1 C 0 s papAnu2.chr10 14640498 53 - 90941950 AAACATAATTTAGGGTTACCTTATTTTAAATCAAAGTATCAgtccttaaataa i papAnu2.chr10 I 1 C 0 s chlSab2.chr19 14693189 53 - 33263144 AAACATAATTTAGAGTTACCGTATTTTAAATCAAAGTATCAGTCCTTAAATAA i chlSab2.chr19 I 1 C 0 s calJac3.chr1 12129026 53 - 210400635 AAACATAATTTAGAGCTACCCTATTTTAAATCAAAGTATCAGTCCttaaataa i calJac3.chr1 I 4 C 0 e mm10.chr15 77124399 961 + 104043685 I e canFam3.chr10 40890392 45 - 69331447 I a score=149796.000000 s hg38.chr22_KI270876v1_alt 118198 66 + 263666 TTTTTTGAAATACATATATAGGGGCAATAACTACTTAATAGTAACAACAAAACTAATATATTTGAG s panTro4.chr22 34496181 66 + 49737984 TTTTTTGAAATACATATATAGGGGCAATAACTACTTAATAGTAACAACAAAACTAATATATTTGAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30912081 66 + 46535552 TTTTTTGAAATACATATATACGGGCAATAACTACTTAATAGTAACAACAAAACTAACATATTTGAG i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 15062009 66 - 95678458 ttttttaaaatacatatataGGGTCAGTAACTACTTAATAGTAACAACAAAACTAATAAATttgag i rheMac3.chr10 C 0 C 0 s macFas5.chr10 15466149 66 + 96509753 TTTTTTAAAATACATATATAGGGTCAGTAACTACTTAATAGTAACAACAAAACTAATAAATttgag i macFas5.chr10 C 0 n 0 s papAnu2.chr10 14640551 66 - 90941950 tttttttaaatacatgtattgGGTCAGTAACTACTTAATAGTAACAACAAAACTAATAAATTTGAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 14693242 66 - 33263144 TTTTTTGAAATACGTCTATAGGGTCAGTAACTACTTAATAGTAACAACAAAACTAATGAATttgag i chlSab2.chr19 C 0 C 0 s calJac3.chr1 12129079 66 - 210400635 tttttaaaaatacatatataGGGGCAATAACTACTTAATAATaacaacaaaactaatatatttgag i calJac3.chr1 C 0 T 55564 e mm10.chr15 77124399 961 + 104043685 I e canFam3.chr10 40890392 45 - 69331447 I e nomLeu3.chr7b 100464762 0 - 115148730 C a score=8148.000000 s hg38.chr22_KI270876v1_alt 118264 3 + 263666 tgc s panTro4.chr22 34496247 3 + 49737984 tgc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30912147 3 + 46535552 tgc i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 15062075 3 - 95678458 tgc i rheMac3.chr10 C 0 n 0 s macFas5.chr10 81042148 3 - 96509753 tgc i macFas5.chr10 I 2 C 0 s papAnu2.chr10 14640617 3 - 90941950 TGC i papAnu2.chr10 C 0 n 0 s chlSab2.chr19 14693308 3 - 33263144 tgc i chlSab2.chr19 C 0 n 0 s calJac3.chr1 198270134 3 + 210400635 tgc i calJac3.chr1 C 0 C 0 e mm10.chr15 77124399 961 + 104043685 I e canFam3.chr10 40890392 45 - 69331447 I e nomLeu3.chr7b 100464762 0 - 115148730 C a score=8384.000000 s hg38.chr22_KI270876v1_alt 118267 13 + 263666 cagatgcataaaa s panTro4.chr22 34496250 13 + 49737984 cagatacataaaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30912150 13 + 46535552 cagatacataaat i ponAbe2.chr22 C 0 C 0 s macFas5.chr10 81042151 13 - 96509753 cagatacccaaat i macFas5.chr10 C 0 C 0 s calJac3.chr1 198270137 13 + 210400635 cagatacccaaat i calJac3.chr1 C 0 C 0 e mm10.chr15 77124399 961 + 104043685 I e canFam3.chr10 40890392 45 - 69331447 I e rheMac3.chr10 15062078 0 - 95678458 I e papAnu2.chr10 14640620 0 - 90941950 I e chlSab2.chr19 14693311 0 - 33263144 I e nomLeu3.chr7b 100464762 0 - 115148730 C a score=14355.000000 s hg38.chr22_KI270876v1_alt 118280 12 + 263666 ctgaatattatg s panTro4.chr22 34496263 12 + 49737984 ctgaatattatg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30912163 12 + 46535552 ctgaatattatg i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80614992 12 + 95678458 ctgaatatcatg i rheMac3.chr10 I 1029 C 0 s macFas5.chr10 81042164 12 - 96509753 ctgaatatcatg i macFas5.chr10 C 0 C 0 s calJac3.chr1 198270150 12 + 210400635 ctgaatataata i calJac3.chr1 C 0 C 0 e mm10.chr15 77124399 961 + 104043685 I e canFam3.chr10 40890392 45 - 69331447 I e papAnu2.chr10 14640620 0 - 90941950 I e chlSab2.chr19 14693311 0 - 33263144 I e nomLeu3.chr7b 100464762 0 - 115148730 C a score=49740.000000 s hg38.chr22_KI270876v1_alt 118292 30 + 263666 gtttgtccattaattgttcttacaagaaaa s panTro4.chr22 34496275 30 + 49737984 gtttgtccattaattgttcttacaagaaaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30912175 30 + 46535552 gtttgtccattaattgttcttacaagaaaa i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80615004 30 + 95678458 gtttgtccattagttgttcttacaagaaaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81042176 30 - 96509753 gtttgtccattagttgttcttacaagaaaa i macFas5.chr10 C 0 C 0 s calJac3.chr1 198270162 30 + 210400635 gtttgtccattagttgttcttacaagaaaa i calJac3.chr1 C 0 I 2 s mm10.chr15 77125360 30 + 104043685 gtctgcccaccagtggttcttgtatggaaa i mm10.chr15 I 961 C 0 e canFam3.chr10 40890392 45 - 69331447 I e papAnu2.chr10 14640620 0 - 90941950 I e chlSab2.chr19 14693311 0 - 33263144 I e nomLeu3.chr7b 100464762 0 - 115148730 C a score=242597.000000 s hg38.chr22_KI270876v1_alt 118322 130 + 263666 aaatggtgctccatg-aaaaaagcagctagttcagcttgcaactcaatcacacagtacttttccttgaaacaatgaaaatattttggtatgtaacacaagtgctttatgaatacttttcactttgccatgt s panTro4.chr22 34496305 130 + 49737984 aaatggtgctccatg-aaaaaagcagctagttcagcttgcaactcaatcacacagtacttttccttgagacaatgaaaatattttggtatgtaacacaagtgctttatgaatacttttcactttgccatgt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30912205 130 + 46535552 aaacggtgctccatg-aaaaaagcagctagttcagcttgcaattcaatcacacggtacttttccttgagacaatgaaaatattttggtatgtaacacaagtgctttatgaatacttttcactttgccatgt i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80615034 131 + 95678458 aaatggtgctccatgaaaaaaagcagctagctcagcttgcaactcaatcacacagtacttttccttgagacaatgaaaatattttggtatgtaacacaagtgctttatgaatactttttactttgccatgt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81042206 131 - 96509753 aaatggtgctccatgaaaaaaagcagctagttcagcttgcaactcaatcacacagtacttttccttgagacaatgaaaatattttggtatgtaacacaagtgctttatgaatactttttactttgccatgt i macFas5.chr10 C 0 C 0 s chlSab2.chr19 18568481 131 + 33263144 aaatggtgcaccatgaaaaaaagcagctagttcagcttgcaactcaatcccacagtacttttccttgagacaatgaaaatattttggtatgtaacacaagtgctttatgaatacttttcactctgccatgt i chlSab2.chr19 I 28 C 0 s calJac3.chr1 198270194 128 + 210400635 aaatggtgctcaatg-aaaaaagcagc-agttcaacttgcaactcaatcacacagtacttttccttgagacaatgaaagtattttgatacggactat-agtgctttatgaatacttttcacgttgccatgt i calJac3.chr1 I 2 C 0 s mm10.chr15 77125390 108 + 104043685 ------------------gacagcagtgagttcagtctgtagttccat--cacaatgctcttgctggtggcaaggaaagcattttga-atagaaaatagatg--gtatgagcacctttcattctcctacag i mm10.chr15 C 0 C 0 e canFam3.chr10 40890392 45 - 69331447 I e papAnu2.chr10 14640620 0 - 90941950 I e nomLeu3.chr7b 100464762 0 - 115148730 C a score=1036170.000000 s hg38.chr22_KI270876v1_alt 118452 419 + 263666 agaatatgaaaaatatcatatact-aat-gtgggaaattaataaaattaatactttttactgcttcatcaaggacattcttaagtgaacgtgatttttttgttttcctgtgagtctgtgacagtgaagaatatgatggctgccagcagcacagtttggtgccacggccttgattcatgctaaggtgctagcagttttacccaccattgcttctgtactgaccgtcaaagcaaatatagtgaaaacagcaagaatgtattggtattactatgaaaataataccttgcattga--cttcatagc-tc---cctcgacccagactctgaaaaaatttagggaactgccagtgatctgtggaccacacAGGG-AAAATTACTGCTGCAAAGGATTGTCCCTGCCTGCAATGTCCTCTACTTCACTGCAGGCT s panTro4.chr22 34496435 421 + 49737984 agaatatgaaaaagatcatatactcaat-gtgggaaattaataaaattaatactttttactgcttcatcaaggacattcttaagtgaacgtgatttttttgttttcctgtgagtctgtgacagtgaagaatatgatggctgccagcagcacagtttggtgccacggccttgattcatgctaaggtgctagcagttttacccaccattgcttctgtactgaccgtcaaagcaaatatagtgaaaacagcaagaatgtattggtattactatgaaaataataccttgcattga--cttcatagc-tc---cctcgacccagactctgaaaaaatttagggaactgccagtgatctgtggaccacacAGGGAAAAACTACTGCTGCAAAGGATTGCCCCTGCCTGCAATGTCCTCTACTTCACTGCAGGCT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30912335 420 + 46535552 agaatatgaaaaagatcatatactcaat-gtgggaaattaataaaattaatactttttactgcttcatcaaggacattcttaagtgaatgtgatttttttgtttccctgtgagtctgtgacagtgaagaatatgatggctgccagcagcacagtttggtgccacagccttgattcaggctaaggtgctagcaattttacccaccattgcttttgtactgaccgtcaaagccaatacagtgaaaacagcaagaatgtattggtattactatgaaaataataccttgcattga--cttcatagc-tc---ccccgacccagactctgaaaaaatttggggaactgccagtgacctgtggaccacacaggg-aaaactactgCTGCAAACGACTGTCCCTGCCTGCAATGTCCTCTACTTCACTGCAGGCT i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80615165 421 + 95678458 agaatatgaaaaagatcatatactcaatggtgggaaattaataaaattaatactttttactgcttcatcaaggacattcttaagtgaacaggattcttttgttttcctgtgagtctgtgacagtgaagaatataatgactgctagcagcatagtttggtgccatggccttgattcatactaaggtgctagcaattttacccaccattgcttttgtactgaccgtcaatgccaatatagtaaaaacagcaagaatgtattggtattactatgaaattaataccttgcattga--cttcataca-cc---ccccgacccagactctgaaaaagtttagggaactgccagtgatctgtggaccacacaggg-aaaactactgCTGCAGAGGACTGCCCCTGCCTGCAATGTCCTCTACTTCACTGCAGGCT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81042337 421 - 96509753 agaatatgaaaaagatcatatactcaatggtgggaaattaataaaattaatactttttactgcttcatcaaggacattcttaagtgaacaggattcttttgttttcctgtgagtctgtgacagtgaagaatataatgactgctagcagcacagtttggtgccacggccttgattcatactaaggtgctagcaattttacccaccattgcttttgtactgaccgtcaatgccaatatagtaaaaacagcaagaatgtattggtattactatgaaattaataccttgcattga--cttcataca-cc---ccccgacccagactctgaaaaagtttagggaactgccagtgatctgtggaccacacaggg-aaaactactgCTGCAGAGGACTGCCCCTGCCTGCAATGTCCTCTACTTCACTGGAGGCT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76300129 420 + 90941950 agaaaaagaaaaagatcatatACTCAATGGtgggaaattaataaaattaatac-ttttactgcttcatcaaggacattcttaagtgaacaagattcttttgttttcctgtgaGTCTGTGACAGTGAAGAATATAATGACTGCTAGCAGCACAGTTTGGTGCCACGGCCTTGATTCATACTAAGGTGCTAGCAATTTTACCCACCATTGCTTTTGTACTGACCGTCAATGCCAATATAGTAAAAACAGCAAGAATGTATTGGTATTACTATGAAATTAATACCTTGCATTGA--CTTCATACA-CC---CCCCGATCCAGACTCTGAAAAAGTTTAGGGAACTGCCAGTGATCTGTGGACCACACAGGG-AAAACTACTGCTGCAGAGGACTGCCCCTGCCTGCAATGTCCTCTACTTCACTGCAGGCT i papAnu2.chr10 I 520 C 0 s chlSab2.chr19 18568612 422 + 33263144 agaatatgaaaaagatcatgtactcaatggtgggaaattaataaaattaatactttttactgcttcatcgaggacattcttaagtgaacaggattcttttgttttcctgtgagtctgtgacagtgaagaatataatgactgctagcagcacagtttggtgccacggccttgattcatgttaaggtgctagcaattttacccaccattgcttttgtactgaccgtcaatgccaatatagtaaaaacagcaagaatgtattggtattactatgaaattaataccttgcattga--cttcatacaccc---ccccgacccagactctgaaaaagtttagggaactgtcagtgatctgtggaccacacAGGA-AAAATTACTGCTGCAGAGGACTGCCCCTGCCTGCAATGTCCTCTACTTCACTGCAGGCT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198270322 419 + 210400635 agaatatgaaaaagataatgttctcaatggtgggaaattaataaaattaatactttttactgcttcatcaaggacattcttaagtgaacg---tattttttttttcctgtgagtttgtgacagtgaagaatataatgactgccagcagtacagtatggtgccatggccttgattcatactaaggtgctagcaatgttacccaccatggcttttgtaatgactgtcaaggccaatatagtgaaaacagcgagaaagtattaatattactatgaaaataatgccttgcattga---ttcacagc-cccctcctccacccagactctgaaagagtttaagaaactgccagtgatctgtggaccatacAGG--AAAACTACTACTGTAGAGCACCGCTCCTGTCTGTAATGTCCTCTACTTCACTGCAGGCT i calJac3.chr1 C 0 C 0 s mm10.chr15 77125498 325 + 104043685 ggaatatgaaaaggaccagttaccc---------------------------------actgtttcaccaaggaccttcttgggtt-------ttcttttgtt---ctgtgcatgtgtgaca--------------tactgccaccagcatggtttactatcactgtttggattcctgct-aggcactggtaatttgaccgactatcgcttttggactgatggcaaaagccaaca-----aaggcagtgaaatggca--ggtgttacattgtaaa--------cgcatggaaactgttta-a-cc---cagcggtcc---ctctaacaaagtcttgggaactgccagtgatctgt-gaccacacACAA-A--------------------TGCCCCATCCTGCATTCTCCTCCAACCCACTGCAGGCT i mm10.chr15 C 0 I 377 e canFam3.chr10 40890392 45 - 69331447 I e nomLeu3.chr7b 100464762 0 - 115148730 C a score=1742542.000000 s hg38.chr22_KI270876v1_alt 118871 760 + 263666 ATGGGTTCACTGTTTAGGAGAAGTAGTACCTACCTTCTAAAAGCATCTCTTAATGAACCCGCTTCATt------a----ctctctttctagcacttatctgtactttgtttttcttttctt------gttttttt----------------gagactgagtttccctcttgttgcccaggctggagtacaatggcacgattttgactcactgcaacctctgcctcccgagtttaagcgattctcctgcctcagcctcccaagtagctgggattacaggcatgcaccaccacgcctggctaattttgtatttttagtagaggcagggtttcaccatgttggttaggctggtcttgaactcccagcctcaggtgatccacctgcctcggcctcccaaagtgctgggattacaggcatgagccactgcaccaggcctgtac--tgtttttctactggaacttctataggttcattgagggca--------ggggctttattttacctttttaagaacacctagtgcctagcacagtaatgtgcacatgacaagtatatataaaacagttgttcaatataatttatgggaaataatgcaggctcttggggccagataacctgtat-ttaaatcctcacactgacatttattagttgtgtgatcttggacaagtaatcttgaatctctctaagcctcaatttcttcatctgtaaaagaggagtaataacgatacctatttcacatggcggctatggtaactcaatggagttaacacataa-aaagtgcttcaaacaatatctggtacaa s panTro4.chr22 34496856 760 + 49737984 ATGGGTTCACTGTTTAGGAGAAGTAGTAGCTACCTTCTAAAAGCATCTCTTAATGAACCCGCTTCATt------a----ctctctttctagcacttatctgtactttgtttttcttttctt------gttttttt----------------gagactgagtttccctcttgttgcccaggctggagtgcaatggcacgatcttgactcactgcaacctctgcctcccgagttcaagcgattctcctgcctcagcctcccaagtagctgggattacaggcatgcaccaccacgcctggctaattttgtatttttagtagaggcagggtttcaccatgttggttaggctggtcttgaacccccatcctcaggtgatccacctgcctcggcctcccaaagtgctgggattacaggcatgagccactgcaccaggcctgtac--tgtttttctactggaacttctgtaggttcattgagggca--------ggggctttattttacctttttaagaacacctagtgcctagcacagtaatgtgcacatgacaagtatatataaaacagttgttcaatataatttatgggaaataatgcaggctcttggggccagataacctgtat-ttaaatcctcacactgacatttattagttgtgtgatcttggacaagtaatcttgaatctctctaagcctcaatttcttcatctgtaaaagaggagtaataacgatacctatttcacatggcggctgtggtaactcaatggagttaacacataa-aaagtgcttcaaacaatatctggtacaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30912755 769 + 46535552 ATGGGTTCACTGTTTAGGAGAAGTAGTACCTACCTTCTAAAAGCATCTCTTAATGAACCTGCTTCATt------a----ctctctttctagcacttatctgtactttgtttttcttttctt------ttctttttt-------tttttttggagactgagtttccctcttgttgcccaggctggagtgcaatggcacgatcttggctcactgcaacctctgcctcctgggttcaagcgattctcctgcctcagcctcccaagtagctgggattacaggcatgcgccaccacgcccggctaattttgtatttttagtagaggcggggtttcaccatgttggttaggctggttttgaactcccaacctcaagtgatccacctgcctcagcctcccaaagtgctgggattataggcatgagccactgcaccaggcctgtac--tgtttttctaccggaacttctataggttcattgagggca--------ggggctttattttacctttttaagaacacctagtgcctagcacagtaatgtgcacatgacaagtatatataaaacagttgttcaatataatttatgggaaataatgcaggctcttggggccagataacctgtatcttaaatcctcacactgacatttattagttgtgtgatcttggacaagtaatcttgaatctctctaagcctcaatttcttcatctgtaaaagaggagtaataatggtacctatttcacatggtgactgtggtaactcaatggagttaacacat-a-aaagtgcttcaaacagtatctggtacaa i ponAbe2.chr22 C 0 I 134 s rheMac3.chr10 80615586 789 + 95678458 ATGGGTTCACTGTTTAGGGGAAGTAGTACCTACCTTCTAAAAGCATCTCTTAATGAACCCACTTCATT------ACTCTCTCTCTCTCTAGCacttatctgtactttgtttttcttttctt------ttctttctttctttttttttttttgagactgagtttccctcttgttgtacaggttggagtgcaatggcatgatctcagctcactgcaacctctgcctcctgggttcaagcgattctcctgcctcagcctcccaagtagctgggattacaggcatgcgccaccacgcccggctaattttgtatttttaatagagacggggtttcaccatgttggttgggctggtctcgaactcccagcctcaggggatccacctgcctcggcctcccaaagttctgggattacaggcatgagccaccacacccagcctgtactttgtttttctaccagaacttctataggtccattgagggcagaggctttgaggctttattttacctttttaagaacacctagtgcctagcacagtaatgtgcacatgacaagtatatataaaacagttgttcagtataatttatgggaaagaatgcaggctcttggagccagataacctgtat-ttaaatcctcacactgacatttattagttgtgtgatcttggacaagtcatcttgaatctctctaagcctcaatttcttcatctgtgaaagaggaataataatgacacctatttcacatggtggctgcggtaattcaatggagttaacacat-a-aaagtgcttcaaacaatatctggtacaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81042758 772 - 96509753 ATGGGTTCACTGTTCAGGGGAAGTAGTACCTACCTTCTAAAAGCATCTCTTAATGAACCCACTTCATT------ACTCTCTCTCTCTCTAGCacttatctgtactttgtttttcttttctt------ttctttc---------ttttttttgagactgagtttccctcttgttgtacaggttggagtgcaatggcatgatctcagctcactgcaacctctgcctcctgggttcaagcgattctcctgcctcagcctcccaagtagctgggattacaggcatgcgccaccacgcctggctaattttgtatttttaatagagacggggtttcaccatgttggttgggctggtctcgaactcccagcctcaggggatccacctgcctcggcctcccaaagttctgggattacaggcatgagccaccacacccagcctgtactttgtttttctaccagaacttctataggtccattgagggca--------gaggctttattttacctttttaagaacacctagtgcctagcacagtaatgtgcacatgacaagtatatataaaacagttgttcagtataatttatgggaaagaatgcaggctcttggagccagataacctgtat-ttaaatcctcacactgacatttattagttgtgtgatcttggacaagtcatcttgaatctctctaagcctcaatttcttcatctgtgaaacaggaataataatgacacctatttcacatggtggctgcggtaattcaatggagttaacacat-a-aaagtgcttcaaacaatatctggtacaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76300549 776 + 90941950 ATGGGTTCACTGTTTAGGGGAAGTAGTACCTACCTTCTAAAAGCATCTCTTAATGAACCCACTtcatt------actctctctctctctagcacTTATctgtactttgtttttcttttctt------ttctttc-----ttttttttttttgagactgagtttccctcttgttgtacaggttggagtgcaatggcatgatctcagctcactgcaacctctgcctcctgggttcaagcgattctcctgcctcagcctcccaagtagctgggattacaggcatgcgccaccacgcccggctaattctgtatttttaaaagagacggggtttcaccatgttggttgggctggtctcgaactcccagcctcaggggatccacctgcctcggcctcccaaagttctgggattacaggcatgagccaccacacccagcctgtactTTGTTTTTCTACCAGAACTTCTATAGGTCCATTGAGGGCA--------GAggctttattttacctttttaagaacacctagtgcctagcacagtaaTGTGCACATGACAAGTATATATAAAACAGTTGTTCAGTATAATTTATGGGAAAGAATGCAGGCTCTTGGAGCCAGATAACCTGTAT-TTAAATCCTCACACTGACATTTattagttgtgtgatcttggacaagtcatcttgaatctctctaagcctcaatttcttcatctgtgaaagaGGAATAATAATGACACCTATTTCACATGGTGGCTGCGGTAATTCAATGGAGTTAACACAT-A-AAAGTGCTTCAAACAATATCTGGTACAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18569034 794 + 33263144 ATGGGTTCACTGTTTAGGGGAAGTAGTACCTACCTTCTAAAAGCATCTCTTAATGAACCCActtcatttctctctctctctctctctctagcacttatctgtactttgtttttcttttctttcttgcttttttttttatttttctttttttgagatggagtttccctcttgttgtccaggttggagtgcaatggcacgatctcagctcactgcaacctccgcctgccgggttcaagcgattctcctgcctcagcctcccaagtagctgggattacaggcatgcaccaccacgtccggctaattttgtatttttaatagagacggggtttcaccatgttggttaggctggtctcgaactcccaacctcaggggatccacctgccttggcctcccaaagtgctgggattacaggcgtgagccaccgcacccagcctgtactttgtttttctaccggaacttctataggttcattgagggca--------gaggctttattttacctttttaagaacacctagtgcctagcacagtaatgtgcacatgacaagtatatataaaacagttgttcagtataatttatgggaaagaatgcaggctcttggagccagataacctgtat-ttaaatcctcacactgacatttattagttgtgtgatcttggacaagtcgtcttgaatctctccaagcctcaatttcttcctctgtgaaagaggaataatgacgacacctatttcacacggtggctgcggtaattcaatggagttaatacat-acaaagtgcttcaaacaatatctgggacaa i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198270741 741 + 210400635 ATGAGTTCACTGTTTAGGGGACATAGTATCTACCTTCTAAAAGCATCTATTAATGAACTCGCTTCATT------ACTCTCTCTCCCTCTCACACTTACCTGTAttttttctttcttttttt------t-----------------------gagatggagtttcgctcttgttatccaagctggagtgcaatggcataatctcagtttaccacaacctcctccttctgggttcaagtgattctcctgcctcagcctcctaaatagctggtattacaggcatctgccaccatgcccggctaattctgtatttttagtagaggcagagtttctccatgttggtcaggctggtcttgaactcctgacct-----------cctgcctcagcctcccaaagtgctgggattacagg-------cactgtgcctgaccTTTACtttgtttttctacttgaacttctataggttcaatgagggca--------agggctttattttacctttttaagaacacctaatgcttagcacagtaatgtgcacatgacaagtatatataaaacagttgttcaatATAATTTATGggaaaaaatgcaggctgttggagccagataacttgtat-tgaaattctcacaatgacatttattagttatgtcatcttggacaaataatcttgaatctctataagccacaatttcttcatctgtaaaagaagagtaataacgatacctattttacatggtggctatgataattcagtggaattaacacataa-aaagtgcttcaaacaatatctggtacag i calJac3.chr1 C 0 C 0 e mm10.chr15 77125823 377 + 104043685 I e canFam3.chr10 40890392 45 - 69331447 I e nomLeu3.chr7b 100464762 0 - 115148730 C a score=17223.000000 s hg38.chr22_KI270876v1_alt 119631 9 + 263666 agtaggcac s panTro4.chr22 34497616 9 + 49737984 agtaagcac i panTro4.chr22 C 0 C 0 s rheMac3.chr10 80616375 9 + 95678458 agtaagcac i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81043530 9 - 96509753 agtaagcac i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76301325 9 + 90941950 AGTAAGCAC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18569828 9 + 33263144 agtaagcac i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198271482 9 + 210400635 agtaagcac i calJac3.chr1 C 0 C 0 e mm10.chr15 77125823 377 + 104043685 I e canFam3.chr10 40890392 45 - 69331447 I e ponAbe2.chr22 30913524 134 + 46535552 I e nomLeu3.chr7b 100464762 0 - 115148730 C a score=140206.000000 s hg38.chr22_KI270876v1_alt 119640 62 + 263666 tcaaatatattagttTTGTTGTTACTATTAAGTAGTTATTGCCCCTATATATGTATTTCAAA s panTro4.chr22 34497625 62 + 49737984 tcaaatatattagttTTGTTGTTACTATTAAGTAGTTATTGCCCCTATATATGTATTTCAAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30913658 62 + 46535552 TCAAATATATTACTTTTGTTGTTACTATTAAGTAGTTATTGCCCCTATATATGTATTTCAAA i ponAbe2.chr22 I 134 C 0 s rheMac3.chr10 80616384 62 + 95678458 tcaaATTTATTAGTTTTGTTGTTACTATTAAGTAGTTACTGACCCtatatatgtattttaaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81043539 62 - 96509753 tcaaATTTATTAGTTTTGTTGTTACTATTAAGTAGTTACTGACCCTATATATGTATTTTAAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76301334 62 + 90941950 TCAAATTTATTAGTTTTGTTGTTACTATTAAGTAGTTACTGACCcaatacatgtatttaaaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18569837 62 + 33263144 tcaaATTCATTAGTTTTGTTGTTACTATTAAGTAGTTACTGACCCTATAGACGTATTTCAAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198271491 62 + 210400635 tcaaatatattagttttgttgttATTATTAAGTAGTTATTGCCCCtatatatgtatttttaa i calJac3.chr1 C 0 C 0 e mm10.chr15 77125823 377 + 104043685 I e canFam3.chr10 40890392 45 - 69331447 I e nomLeu3.chr7b 100464762 0 - 115148730 C a score=171324.000000 s hg38.chr22_KI270876v1_alt 119702 56 + 263666 AAATTATTTAAGGACTGATATTTTGATTTAAAAGAAGGTAGCTCTAAATTATGTTT s panTro4.chr22 34497687 56 + 49737984 AAATTATTTAAGGACTGATATTTTGATTTAAAAGAAGGTAGCTCTAAATTATGTTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30913720 56 + 46535552 AAATTATTTAAGGACTGATATTTTGATTTAAAAGAAGGTAGCTCTAAATTATGTTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 14683965 56 + 115148730 AAATTATTTAAGGACTGATATTTCGATTTAAAAGAAGGTAGCTCTGAATTATGTTT i nomLeu3.chr7b n 0 C 0 s rheMac3.chr10 80616446 56 + 95678458 aaattatttaaGGACTGATACTTTGATTTAAAATAAGGTAACCCTAAATTATGTTT i rheMac3.chr10 C 0 I 433 s macFas5.chr10 81043601 56 - 96509753 AAATTATTTAAGGACTGATACTTTGATTTAAAATAAGGTAACCCTAAATTATGTTT i macFas5.chr10 C 0 I 1 s papAnu2.chr10 76301396 56 + 90941950 aaattatttaaggacTGATACTTTGATTTAAAATAAGGTAACCCTAAATTATGTTT i papAnu2.chr10 C 0 I 1 s chlSab2.chr19 18569899 56 + 33263144 AAATTATTTAAGGACTGATACTTTGATTTAAAATACGGTAACTCTAAATTATGTTT i chlSab2.chr19 C 0 I 1 s calJac3.chr1 198271553 56 + 210400635 aaattatttaaGGACTGATACTTTGATTTAAAATAGGGTAGCTCTAAATTATGTTT i calJac3.chr1 C 0 I 4 e mm10.chr15 77125823 377 + 104043685 I e canFam3.chr10 40890392 45 - 69331447 I a score=466681.000000 s hg38.chr22_KI270876v1_alt 119758 158 + 263666 GAAGAGTGTATAAGGGGAAATAAATGTATTTTATTTTCCTAATTATCCAGTTAGGAAAACCTTATATTTAAGTGAAAGACTCAATAACATGC----TATGTCTCCTAAGTAAATGATTCTAATTACATCAAACTAAGAAAAAGA---AAAGTATTTACATTATAC s panTro4.chr22 34497743 161 + 49737984 GAAGAGTGTATAAGGGGAAATAAATGTATTTTATTTTCCTAATTATCCAGTTAGGAAAACCTTATATTTAAGTGAAAGACTCAATAACATAC----TATGTCTCCTAAGTAAATGATTCTAATTACATCAAACTAAGAAAAAGAAAGAAAGTATTTACATTATAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30913776 164 + 46535552 GAAGAGTGTATAAGGGGAAATAAATGTATTTTATTTTCCTAATTATCCAGTTAGGAAAACCTTATATTTAAGTGAAAGACTCAATAACATGCTATGTATGTCTCCTGAGTAAATGATTCTAATTACATCAAACTAAGAAAAAGAAAGAAAGTATTTACATTATA- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 14684021 156 + 115148730 GAAGAGTGTATAAGGGGAAATAAGTGTATTTTATTTTCCTAATTATCCAGTTAGGAAAACCTTGTATTTAAGTGAAAGACTC-ACAACATGC----TATGTCTCCTGAGTAAGTGATTCTGATTACATCAAACTAAGAAAAAG----AAAGTATTTACATTATAC i nomLeu3.chr7b C 0 n 0 s rheMac3.chr10 80616935 157 + 95678458 GAAGAGTGTATAAGGGGAAATAGATGTATTTTATTTTCCTAATTATCCAGTTAGGAAAACCTTATATTTAAGTGAAAGACTCAATAACATGC----CATGTCTCCTAAGTAAATGATTCTAATTACATCCAACTAAGAAAAAG----AAAGTATTTACATTATAT i rheMac3.chr10 I 433 C 0 s macFas5.chr10 81043658 157 - 96509753 GAAGAGTGTATAAGGGGAAATAGATGTATTTTATTTTCCTAATTATCCAGTTAGGAAAACCTTATATTTAAGTGAAAGACTCAATAACATGC----CATGTCTCCTAAGTAAATGATTCTAATTACATCCAACTAAGAAAAAG----AAAGTATTTACATTATAT i macFas5.chr10 I 1 C 0 s papAnu2.chr10 76301453 157 + 90941950 GAAGAGTGTATAAGGGGAAatagatgtattttattttcctaattatcCAGTTAGGAAAACCTTATATTTAAGTGAAAGACTCAATAACATGC----CATGTCTCCTAAGTAAATGATTCTAATTACATCcaactaagaaaaag----aaagtatttacaTTATAT i papAnu2.chr10 I 1 C 0 s chlSab2.chr19 18569956 157 + 33263144 GAAGAGTGTATAAGGGGAAATAAATGTGTTTTATTTTCCTAATTATCCAGTTAGGAAAACCTTATATTTAAGTGAAAGACTCAATAACATGC----CGTGTCTCCTAAGTAAATGATTCTAATTACATCAAACTAAGAAAAAG----AAAGTATTTACATTATAT i chlSab2.chr19 I 1 C 0 s calJac3.chr1 198271613 153 + 210400635 AAAGAGTGTGTAAGGGGAAATAAATGTATTTTATTTTCCTAATTATCCAGTTAGGAAAACCTTATATTTAAGTGAAAGACTCAATAACATGC----TTTGTCTCCTAAGTAAATGATTCTAATTACATCAAACTAAGAAG-------GAAGTATTTACACATAA- i calJac3.chr1 I 4 C 0 e mm10.chr15 77125823 377 + 104043685 I e canFam3.chr10 40890392 45 - 69331447 I a score=200448.000000 s hg38.chr22_KI270876v1_alt 119916 98 + 263666 GGAAGAATGTTGGAGAAATGAATTCTGTTACCTAAACTGATGTATTAACTCAGTATTTTTAATAGCGT-ATGTCTAACACCTTAGACCACCTATACGCC s panTro4.chr22 34497904 98 + 49737984 GGAAGAATGTTGGAGAAATGAATTCTGTTACCTAAACTGATGTATTAACTCAGTATTTTTAATAGCAT-ATGTCTAACACCTTAGACCACCTATACGCC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30913940 98 + 46535552 GGAAGAATGTTGGAGAAATGAATTCTGTTACCTAAACTGATGTATTAACTCAGTATTTTTAACAGCGT-ATGTCTAACACCTTAGACCACCTATACACC i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80617092 96 + 95678458 GGAAGAATGTTGGAGAAATGAAT--TGTTACCTAAACTGCTGTATTAACTCAATATTTTTAATAGTGT-ATGTCTAACACCTTAGACCACCTATACACC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81043815 96 - 96509753 GGAAGAATGTTGGAGAAATGAAT--TGTTACCTAAACTGCTGTATTAACTCAATATTTTTAATAGTGT-ATGTCTAACACCTTAGACCACCTATACACC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76301610 96 + 90941950 GGAAGAATGTTGGAGAAATGAAT--TGTTACCTAAACTGATGTATtaactcaatatttttaatagtgt-ATGTCTAACACCTTAGACCACCTATACACC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18570113 90 + 33263144 GGAAGAATGTTGGAGAAATGAAT--TGTTACCTAAACTGATGTATTAACTCAGTATTTTTAATAGCGT-ATGTCTAACGCCTTAGACCACCTA------ i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198271766 81 + 210400635 GGAAGAACACTGGAGAAATAAAG--TGTTACCTAAACTGTTATATTAACTCAGTGTTTTTAATAGTGTCACGCCTAACACCTT---------------- i calJac3.chr1 C 0 C 0 e mm10.chr15 77125823 377 + 104043685 I e canFam3.chr10 40890392 45 - 69331447 I e nomLeu3.chr7b 14684177 0 + 115148730 I a score=33855.000000 s hg38.chr22_KI270876v1_alt 120014 11 + 263666 TTTAGAACAAC s panTro4.chr22 34498002 11 + 49737984 TTTAGAACAAC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30914038 11 + 46535552 TTTAGAACAAC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100464762 11 - 115148730 TTTAGAACAAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80617188 11 + 95678458 TTTAGAACAAC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81043911 11 - 96509753 TTTAGAACAAC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76301706 11 + 90941950 TTTAGAACAAC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18570203 10 + 33263144 -TTAGAACAAC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198271847 9 + 210400635 --TAGAACAAC i calJac3.chr1 C 0 C 0 e mm10.chr15 77125823 377 + 104043685 I e canFam3.chr10 40890392 45 - 69331447 I a score=535542.000000 s hg38.chr22_KI270876v1_alt 120025 176 + 263666 TATAAGCCTTCCCCACCACTAGAAAGCACTTGCTAGTAAGTGTTTGTATCCATAATATACCAATAGAGGTGACAGAAACAGAGAGAGAATTATTTCCTACCCTTAAGAATAATAC----------------------------------------------------------------------------------------AATCCAACAGGTAGTTAGAATATGTACAC-AAATATAAACATCATATCTGAAGAGTATTCAC s panTro4.chr22 34498013 176 + 49737984 TATAAGCCTTCCCCACCACTAGAAAGCACTTGCTAGTAAGTGTTTGTATCCATAATATACCAATAGAGGTGACAGAAACAGAGAGAGAATTATTTCCTACCCTCAAGAATAATAC----------------------------------------------------------------------------------------AATCCAACAGGTAGTTAGAATATGTACAC-AAATATAAACATCATATCTGAAGAGTATTCAC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30914049 176 + 46535552 TATAAGCCTTCCCCACCACTAGAAAGCACTTGCTAGTAAGTGTTTGTATCCATAATATACCAGCAGAGGTGACAGAAACAGAGAGAGAATTATTTCCTACCCTCAAGAATAATAT----------------------------------------------------------------------------------------CATCCAACAGGTGGTTAGAATATGTACAC-AAATATAAACCTCATTTCTGAAGAGTATTCAC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100464773 260 - 115148730 TATAAGCCTTCCCCACCACTAGAAAGCACTTGCTAGTAAGTGTTTGTATCCATAATATACCAGTAGAGGTGACAGAAACAGAGAAAG----ATTTCCTACCCTCAAGAataatatattcaaataatatattttaattattgaataatattatattcaaataatattctattctattgaataatattatattcaaataataataaattCAACAGGTAGTTAGAATATGTACAC-AAATATAAACCTCGTATCTGAAGAGTATTCAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80617199 176 + 95678458 TATAAGCCTCCCCCACCATTAGAAAGCACTTGCTAATAAGTGTCTGTATCCATAATATACCAGTAGAGATGATAAAAACAGAGAACGTATTATTTCCTACCCTCAAGAAGAATAT----------------------------------------------------------------------------------------AATCCAACAGGCAGTTAGAATATGTACAC-AAATATAAACCTCATATCTGAAGAGTATTCAC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81043922 176 - 96509753 TATAAGCCTCCCCCACCATTAGAAAGCACTTGCTAATAAGTGTCTGTATCCATAATATACCAGTAGAGATGATAAAAACAGAGAACGTATTATTTCCTACCCTCAAGAAGAATAT----------------------------------------------------------------------------------------AATCCAACAGGCAGTTAGAATATGTACAC-AAATATAAACTTCATATCTGAAGAGTATTCAC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76301717 176 + 90941950 TATAAGCCTCCCCCACCATTAGAAAGCACTTGCTAATAAGTGTCTGTATCCATAATATACCAGTAGAGATGATAAAAACAGAGAACGTATTATTTCCTACCCTCAAGAAGAATAT----------------------------------------------------------------------------------------AATCCAACAGGCAGTTAGAATATGTACAC-AAATATAAACCTCATATCTGAAGAGTATTCAC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18570213 176 + 33263144 TATAAGCCTCCCCCACCATTAGAAAGCACTTGCTGATAAGTGTCTGTATCCATAATATACCAGTAGAGATGATAAAAACAGAGAACATATTATTTCCTACCCTCAAGAAGAATAT----------------------------------------------------------------------------------------AATCCAACAGGCAGTTAGAATATGTACAC-AAATATAAACCTCATATCTGAGGAGTATTCAC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198271856 172 + 210400635 TATAAGCCTCTCCCACCATTAGAAAGCA----CTAATAAGTGTTTGTATCCATAATATACCAGTAGAGGTGATAAAAACAGAGAAAATATCATTTCCTGACCTCAAGAAAAATAT----------------------------------------------------------------------------------------AATCCAACAGGTAGTTAGAATATGTACAC-AAATGTAAACTTCACATCTGAAGAGTATTCAC i calJac3.chr1 C 0 C 0 s canFam3.chr10 40890437 159 - 69331447 TACAAGCTTTTttcac--tcaaaaaacacttattaaaca----------tcattatatgccaatgggagtaataagaggacaagtggta----ctcctgccctcagggaaagtag----------------------------------------------------------------------------------------aatctactagataggtagaatatgtatataaaACACAAACCT--TATCTGAAGATTACTCAC i canFam3.chr10 I 45 C 0 e mm10.chr15 77125823 377 + 104043685 I a score=1679854.000000 s hg38.chr22_KI270876v1_alt 120201 490 + 263666 TAAAGCTTGTCTACTTCAAATTCTTTGGTTATTTATACCCACTGCCATTTAGAAAAGT-ATCTAAAGATACAGGAACTGAGGTCC-TTTTTTCTCTGCAGGCAGGCCCAGAGATGATCAAGTGTCTGCAGGCCCAGGTGGTAGACCCCTAACT-GCTTACCTCTTTTGCTAATGCACAGTATGGGACCAACTGACTATCAAAATAAGCTCTCA--TCTTAAGAGC---AGAAGCTTCTAGCCCAAGGTTAAAATCGATTTCTAAAACACATTTTAAAAATAAAAATTTCAGATTTTAATGCTCAGTTCTCATTTTTGTACAAGT--TCTTTTCTTTTT-GTTCTCTCCAACAATCTAAGACCATCCAACATAAGCGAAATATACTTAAATGGAGCTG------------TAGCTCACAGCA-----------ACAAAC--AGTACAAATAGGGACAACTGATCTTAAAAGACTTATGATGGTT----AAAAATAATTACTTCggctggatgtggtggctcacttctgtaa s panTro4.chr22 34498189 489 + 49737984 TAAAGCTTGTCTACTTCAAATTCTTTGGTTATTTATACCCACTGCCATTTAGAAAAGT-ATCTGAAGATACAGGAACTGAGGTCC-TTTTTTCTCTGCAGGCAGGCCCAGAGATGATCAAGTGTCTGCAGGCCCAGGTGGTAGACCCCTAACT-GC-TACCTCTTTTGCTAATGCACAGTATGGGATCAACTGACTATCAAAATAAGCTCTCA--TCTTAAGAGC---AGAAGCTTCTAGCCCAAGGTTAAAATCGATTTCTAAAACACATTTTAAAAATAAAAATTTCAGATTTTAATGCTCAGTTCTCATTTTTGTACAAGT--TCTTTTCTTTTT-GTTCTCTCCAACAAGCTAAGACCATCCAACATAAGCGAAATATACTTAAATGGAGCTG------------TAGCTCACAGCA-----------AAAAAT--AGTACAAATAGGGACAACTGATCTTAAAAGACTTATGATGGTT----AAAAATAATTACTTTggctggatgtggtggctcacgtctgtaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30914225 489 + 46535552 TAAAGCTTGTCTACTTCAAATTCTTTGGTTATTTATACCCACTGCCATTTAGAAAAGT-ATCTAAAGATACAGGAACTGAGGCCC-TTTTTTCTGTGCAGGCAGGCCCAGAGATGATCAAGTGTCTGCAGGCCCAGGTGGTAGAcccctgact-gc-tacctcttttgctaatgcacagtatgggatcaactgactatcaaaaTAAGCTCTCA--TCTTAAGAGC---AGAAGCTTCTAGCCCAAGGTTAAAATCGATTTCTAAAACACATTTAAAAAATAAAAATTTCAGATTTTAATGCTCAGTTCTCATTTTTGTACAAGT--TCTTTTCTTTTT-GTTCTCTCCAACAAGCTAAGACTATCCAACATAAACGAAATATACCTAAATGGAGCTG------------TAGCTCACAGCA-----------ACAAAT--AGTACAAATAGGGACAACTGATGTTAAAAGACTTATGATGGTT----AAAAATAATTACTTTggctggatgtggtggctcacgtctgtaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100465033 489 - 115148730 TAAAGCTTGTCTACTTCAAATTCTTTGGTTATTTATACCCATTGCCATTTAGAAAAGT-ATCTAAAGATACAGGAACTGAGGTCC-TTTTTTCTCTGCAGGCAGGCCCAGAGATGATCAAGTGTCTGCAGGCCCAGGTGGTAGACCCCTAACT-GC-TACCTCTTTTGCTAATGCACAGTATGGGACCAACTGACTATCAAAATAAGCTCTCA--TCTTAAGAGC---AGAAGCTTCTAGCCCAAGGTTAAAATCGATTTCTAAAACACATTTTAAAAATAAACATTTCAGATTTTAATGCTCAGGTCTCATTTTTGTACAAGT--TCTTTTCTTTTT-GTTCTCTCCATCAAGCTAAGACTATCCAACATAAACGAAATATACCTAAATGGAGCTG------------TAGCTCACAGCA-----------ACAAAC--AGTACAAATAGGGACAACTGATCTTAAAAGACTTATGATGGTT----AAAAATAATTACTTTggctggatgtggtggctcacgtctgcaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80617375 498 + 95678458 TAAAGCTTGTCTACTTCAAAGTCTTTGGTTATTTAAACCCACTGCCATTTAGAAAAGT-ATCTAAAGATACAGGAACTGAGGTCC-TTTTTTCTCTGCAGGCAGGCCCAGAGATGATCAAGTGTCTGCAGGCCCGGGTGGTAGACCCCTAACT-GC-TGCCTCTTTTGCTAATGCACAGTATGGGACCAACTGACTATCCAAATAAGCTCTCA--TCTTGAGAGC---AGGAGCTCCCAGCTCAAGGTTAAAATCGACTTCTAAAACACAGTTTCAAAATAAAAATTTCAGATTCTAATGCTCAGTTCTCATTGTTGTACAAGC--TCTTTTCTTTTT-GTTCTCTCCAACAAGCTAAGACTGTCCAACATAAACGAAACATATCTAAATGGAGCTG------------TAGCTCACAGTAAC--AAAAAGCACAAAC--AGTACAAATAGGGACAACTGATCTTAAAAGACTTATGATGGTT----ACAAATAATTACTTCggctggatgtggtggctcacgtctgtaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81044098 498 - 96509753 TAAAGCTTGTCTACTTCAAAGTCTTTGGTTATTTAAACCCACTGCCATTTAGAAAAGT-ATCTAAAGATACAGGAACTGAGGTCC-TTTTTTCTCTGCAGGCAGGCCCAGAGATGATCAAGTGTCTGCAGGCCCGGGTGGTAGACCCCTAACT-GC-TGCCTCTTTTGCTAATGCACAGTATGGGACCAACTGACTATCCAAATAAGCTCTCA--TCTTGAGAGC---AGGAGCTCCCAGCTCAAGGTTAAAATCGACTTCTAAAACACAGTTTCAAAATAAAAATTTCAGATTCTAATGCTCAGTTCTCATTGTTGTACAAGC--TCTTTTCTTTTT-GTTCTCTCCAACAAGCTAAGACTGTCCAACATAAACGAAACATATCTAAATGGAGCTG------------TAGCTCACAGTAAC--AAAAAGCACAAAC--AATACAAATAGGGACAACTGATCTTAAAAGACTTATGATGGTT----ACAAATAATTACTTCggctggatgtggtggctcacgtctgtaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76301893 498 + 90941950 TAAAGCTTGTCTACTTCAAAGTCTTTGGTTATTTAAACCCACTGCCATTTAGAAAAGT-ATCTAAAGATACAGGAACTGAGGTCC-TTTTTTCTCTGCAGGCAGGCCCAGAGATGATCAAGTGTCTGCAGGCCCGGGTGGTAGACCCCTAACT-GC-TGCCTCTTTTGCTAACGCACAGTATGGGACCAACTGACTATCCAAATAAGCTCTCA--TCTTGAGAGC---AGGAGCTCCCAGCTCAAGGTTAAAATCGACTTCTAAAAcacagtttcaaaataaaaatttcagattcTAATGCTCAGTTCTCATTGTTGTAcaagc--tcttttcttttt-gttctctccaACAAGCTAAGACTATCCAACATAAACGAAACATATCTAAATGGAGCTG------------TAGCTCACAGtaac--aaaaagcacaaac--agTACAAATAGGGACAACTGATCTTAAAAGACTTATGATGGTT----ACAAATAATTACTtcggctggatgtggtggctcacgtctgtaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18570389 496 + 33263144 TAAAGCTTGTCTACTTCAAAGTCTTTGGTTATTTAAACCCACTGCCATTTAGAAAAGT-ATCTAAAGATACGGGAACTGAGGTCC-TTTTTTCTCTGCAGGCAGGCCCAGAGATGATCAAGTGTCTGCAGGCCTGGGCGGTAGACCCCTAACT-GC-TGCCTCTTTTGCTAATGCACAGTATGGGACCAACTGACTATCCAAACAAGCTCTCA--TCTTGAGAGC---AGGAGCTCCCAGCCCAAGGTTAAAATCGACTTCTAAAACACAGTTTCAAAATAAAAATTTCAGATTCTAATGCTCAGTTCTCATTGTTGTACAAGC--TCTTTTCTTTTT-GT--TCTCCAACAAGCTAAGACTATCCAACATAAACGAAACATACCTAAATGGAGCTA------------TAGCTCACAGTAAC--AAAAAGCACAAAC--AGTACAAATAGGAACAACTGATCTTAAAAGACTTATGATGGTT----ACAAATAATTACTTCggctggatgtggtggctcacgtctgtaa i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198272028 469 + 210400635 TAAAGCTTGTCTACTTCAAATTCTTTGTATATTGCTACCTGCTGCCATTTAGAAAAGTAAGCTAAAGATACAGGAACTGAGATCCTTTTTTTCTCTGCAGGTAGGCCCA--------------------------GGTGGTAGACTGCTAACT-GC-TACCTCTTTTACTAATGCACAGTACAGGACCAACTGACTATCAAAATTAGCTCTCA--GCTTAAGAGC---AGAAGCTTCTAGTTCAAGGTTAAAATCAATTTCTAAAACATGTTTTAAAAATAAAAATTTCAGATTTCAATGCTCAGTTCTCATTTTTGTATAAG-------TTCTTTTT-GTTCTCTCCAACAAGGTAAGACTATCCAACATAAATGAAATCTACTGAAATGAAGCTG------------TAGCTCACAGTAAC--AAAAAGCACAAAC--AGTACAAATAGGGACAACTAATTTTAAAAGACTTATGATGGTT----AAAAATAATTACTTTggctggatgtggtggctcatgtctgtaa i calJac3.chr1 C 0 C 0 s mm10.chr15 77126200 382 + 104043685 TAAAACCTGACTACTTCAAATGCTTTGGCTACTTAAGCTTGCTGTCCTTTAGAAA--T-ATTTGCA-ATGTAATAACTGGATTCC-TGTCTTCTCTGTAGGC-------------------------------CAGGAGGCAG-CCCCTAACTGGC-TGGTGCTTTTGCCAGTGCATAACAAGAGACCAA-TGACCATCAAAACAAACTTAAAACTCTTAAAGGC---AGA----------CCAA-----------ATTTCTAAAATTCATTTAAAAAACAAACACTCTAGAACTCAGTGCTCAGTTCTTATCTTTAAATGAGAAGTCCTTTCTTTT----------CAACATGACAGGACTATCCAACCCAACCCAAGCA---------AGAGCTGGACTCAACAGCACAGCTCATAGCA-----------ATAAGC--AGCATAAACA--------------------------------------------------CCagccaggcatggtagtacacctc---aa i mm10.chr15 I 377 C 0 s canFam3.chr10 40890596 481 - 69331447 CAAAGCTTGTCTACTTCAAATACTTCAGTCACTTACACCTGCCAGGGTTCAGAGGAGT-ATCTACACATACAGCAACTGAGGTCC-TTTCTTCTCTGCAGGCAGGCGCAGGGGTAATCAGGCCTCTATGAG--GGGGGTGGAGAACCCTGACT-GC-------------TAATGCACAGTATGGGACAAACTGACTCTTAGAACAGGCTCTTG--TCTTAAGGGTACAAGAAGCTTCTAGCTCAACTTGAAAATCAATTTCTGAAATACATTTTAGAAATAAA-ATTCCAGATTTCATTGCTTATTTATCATTTTTGTAGAAGT--TCCTTTTTTTTTGGTTCTCTCACACAAGATGGGACTATTCAACATAAA--ATCTCCATTACAGTATAACTG--------------GCTCACAGCAATAAAAAAAACACAAATCAAGGACATCAAGAGACAACTGATTTTAAAA-------GATAGTTTTAAAAAAGCAATTAAAgggact---tctggtagctcagttggttaa i canFam3.chr10 C 0 I 174 a score=366616.000000 s hg38.chr22_KI270876v1_alt 120691 131 + 263666 tcccagcactctgggatgctgaggtgggagaattgcttgagcccagtagttccagaccagccagagcaagacacagggagaccctgtctctacaaataat-aaaaaaaaaattagccgggtgtgggggtaca s panTro4.chr22 34498678 132 + 49737984 tcccagcactctgggatgctgaggtgggagaactgcttgagcccagtagttccagaccagcctgagcaagacacagggagaccctgtctctacaaataataaaaaaaaaaattagccgggtgtgggggtaca i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30914714 130 + 46535552 tcccagcactctgggatgctgaggtgggaggactgcttgagcccagtagttccagaccagcatgagca--acatagggagaccctgtctctacaattaataaaaaaaaaaattagctgggtgtgggggtaca i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100465522 128 - 115148730 tcccagcactctgggatgctgaggtgggaggactgcttgagcccagtagttccagaccagcctgagca--acatagggagaccctgtctctacaaataat-aaaaaaaaaattagcc-ggtgtgggggtgca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80617873 127 + 95678458 tcccagcactctgggatgctgaggtgggaggaccgcttgaccccaggagttccaggccagcctgagca--acatagggagaccttgtctctacaaataat---aaaaaaaattagccgggtgtgggggtgca i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81044596 127 - 96509753 tcccagcactctgggatgctgaggtgggaggactgcttgaccccaggagttccaggccagcctgagca--acatagggagaccctgtctctacaaataat---aaaaaaaattagccgggtgtgggggtgca i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76302391 127 + 90941950 tcccagcactctgggatgctgaggtgggaggactgcttgaccccaggagttccaggccagcctgagca--acatagggagaccctgtctctacaaataat---aaaaaaaattagccgggtgtgggggtgca i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18570885 126 + 33263144 tcccagcactctgggatgctgaggtgggaggactgcttgaccccaggagttccaggtcagcctgagca--acatagggagaccctgactctacaaataat---aaaaaaaattagcc-ggtgtggagatgca i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198272497 127 + 210400635 tcccagcactctgggatggtgaggtgagaggactgcttaaggccaggagttcaagaccagcctcagca--acatagggagaccc-atctctacaaataat--aaaacaaaatttgccgagcgtggtggtgta i calJac3.chr1 C 0 C 0 s mm10.chr15 77126582 98 + 104043685 taccaggacgc--agaggctgaggtagaagaatcttt----------agtttaaggcctatctgggct--acaaagtcag-ccttgcctc----aaaaaT---------------CCCAggctggggatgta i mm10.chr15 C 0 I 94 e canFam3.chr10 40891077 174 - 69331447 I a score=357564.000000 s hg38.chr22_KI270876v1_alt 120822 153 + 263666 cgcctgtagtcccagctactcgtggcggctgaggcaggaggaccatctgagcctgggaggcagaggctgcaatgagctgagaccatgccactgcactccagcctgggtgacagagtgagac-------------------------------------------------------------------------------cctacctcaaaGACCCCCTTCCCCCACCCCCC s panTro4.chr22 34498810 153 + 49737984 cgcctgtagtcccagctactcatggcggctgaggcaggaggaccatctgagcctgggaggcagaggctgcaatgagctgagaccatgccactgcactccagcctgggtgacagagtgagac-------------------------------------------------------------------------------cctacctcaaaGACCCCCTTCCCCCACCCCCC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30914844 153 + 46535552 tgcctgtggtcccagctactcatggcggctgaggcaggaggactgcctgagcctgggaggcagaggctgcagtgagctgagaccatgccattgcactccagcctgggtgacagagtgagac-------------------------------------------------------------------------------cctacctcaaaGACCGCCTTCCCTCACCCCCC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100465650 153 - 115148730 cacctgtggtcccagctactcaaggcagctcaggcaggaggactgcctgagcctgggaggcagaggctgcagtgagctgagaccatgccactgcactccagcctgggtgacagagtgagac-------------------------------------------------------------------------------cctacctcaaaGACCCCCTTCCCCCACCCCCC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80618000 137 + 95678458 tgcctgtggtcccagctactcgtggcgg------------------ctgagcctgggaggcagaggctgcagtgagccgagaccatgccactgcactgcag-ctgggtgacagagtaagacccta---------------------------------------------------------------------------cctACCTCAAAGACCCCCTTTCCCCA-CCCCA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81044723 137 - 96509753 tgcctgtggtcccagctactcgtggcgg------------------ctgagcctgggaggcagaggttgcagtgagccgagaccatgccactgcactgcag-ctgggtgacagagtaagacccta---------------------------------------------------------------------------cctACCTCAAAGACCCCCTTTCCCCA-CCCCA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76302518 137 + 90941950 tgcctgtggtcccagctactcgtggcgg------------------ctgaggctgggaggcagaggctgcagtgagccgagaccatgccactgcactgcag-ctgggtgacagagtaagacctta---------------------------------------------------------------------------cCTACCTCAAAGaccccctttcccca-cccca i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18571011 137 + 33263144 tgcctgtggtcccagctactcgtggcgg------------------ctgaggctgggaggcagaggctgcagtgagctgagaccatgccactgcacaccag-ctgggtgacagagtaagacccta---------------------------------------------------------------------------cctACCTCAAAGACCCCCTTTCCCCA-CCCCA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198272624 227 + 210400635 cacctgtggttccagccagtcaggggagctgaggcaggaggattgcctgagcctgggaggcagaggctgtagtgagctgagaccatgccactgcaccccagcctgggtgacagagtgagaccctacctcaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTGAGACCCTACCTCAAAGATCCCTTTCCCCTG-----A i calJac3.chr1 C 0 C 0 e mm10.chr15 77126680 94 + 104043685 I e canFam3.chr10 40891077 174 - 69331447 I a score=146297.000000 s hg38.chr22_KI270876v1_alt 120975 45 + 263666 AAAAAAGGTAATTAGGTAactatttaaacaagtaatttccaaagc s panTro4.chr22 34498963 45 + 49737984 AAAAAAGGTAATTAGGTAactatttaaacaagtaatttccaaagc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30914997 45 + 46535552 AAAAAAGGTAATTAAGGAactatttaaacaagtaatttccaaagc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100465803 45 - 115148730 AAAAAAGGTAATTAAGGAACTACTTAAACaagtaatttccaaagc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80618137 45 + 95678458 AAAAAAGGTAATTAAGGAACTAATTAAACaagtaatttccaaagt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81044860 45 - 96509753 AAAAAAGGTAATTAAGGAACTAATTAAACaagtaatttccaaagt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76302655 45 + 90941950 aaaaaaGGTAATTAAGGAACTAATTAAACAAGTAATTTCCaaagt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18571148 45 + 33263144 AAAAAAGGTAATTAAGGAACTAATTAAACaagtaatttccaaagt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198272851 42 + 210400635 AAACAAGGTAAGTA-GGAactatttaaacagt--atttccaaaga i calJac3.chr1 C 0 C 0 s canFam3.chr10 40891251 45 - 69331447 aaaaaaaGCAATTAAAGGACTATTCAAACCAGTAATCTCCAAAAc i canFam3.chr10 I 174 C 0 e mm10.chr15 77126680 94 + 104043685 I a score=3302581.000000 s hg38.chr22_KI270876v1_alt 121020 974 + 263666 atttcttaatttattctcactacaaccctgtacagtcaggtcaag--tataaacttcatttgatagatgaggaaactgaaa-ttg-gaggtaaaatgatttattcaag--ACAATTATTA--CAATAAGGATGGCACAATCTTTG----TGCTACCT-----CTTATCTTACTCATCCAACC---AGCTGTCAAATCC-----TCTATATTCT--ACCTTCATAATGTCTCCTGAATTCATT-CCC-------CCTCTACATAACCACT------------------------TAAGACTGTTTCCTAA-TCGTCTGCCTGCTCCTCTATTCACCCTGCATACGCTGTGACAGATCAATCTTCTCCGAGCACAATTCTGCTCACTT-CATTTACTTGCTC-AAAATCTTTAATAAAGTCCATATTTCTCAGCCT------GGCATTCAAATACTCTTCCCAATTTATACTCAACTGACACTTATTCCACCTTATTTCCCACTAGTCTCTGCCAAACACCTAAAGCTTCAATCAAGTAGAAACCTATGCTTTTATCCCGAGGCATTTTG---------ATCCTTCTCATCACTTCAACTTTGTATTGAGAACTGACGTTCTT--AACTCTTCCCACTACCATCTATGCTTACTCGAATTCTAATTAC---CA-TTAATACAAGGCCCAGATCAA-TGCTGTATTCACCAAGACGCCTCAGCTTCTCTCTCCTCAGAACTGCCATAATACAATTGTACCTAG-TTT-TTTTTTTttccccc---------aagaagcatttactgagt-tctatta------------------agtgtcaggcactgtgacaagtcagggaatgcaaagatgaaa----aatgactttttctttaaaagttt--aaaactta---ggaagacaaaagtcaatttaaaaatcacaatttatatgttacataaacagcagtcagcttacggttctacttgagcctaaatgaaggacacacgaatttggctttgcctagaaaagtccaggaaggcttttcagcagagataagacttaaactgagtgggaaaagatac-taagtgcttgctaa s panTro4.chr22 34499008 975 + 49737984 atttcttaatttattctcactacaaccctgtacagtcaggtcaat--tataaacttcatttgatagatgaggaaactgaaa-ttg-gaggtaaaatgatttattcaag--ACAATTATTA--CAATAAGGATGGCACAATCTTTG----TGCTACCT-----CTTATCTTACTCATCCAACT---AGCTGTCAAATCC-----TCTATATTCT--ACCTTCATAATGTCTCCTGAATTCATT-CCC-------CCTCTACATAACCACT------------------------TAAGACTGTTTCCTAA-TCGTCTGCCTGCTCCTCTATTCATCCTGTATACGCTGTGACAGATCAATCTTCTCCGAGCACAATTCTGCTCACTT-CATTTACTTGCTC-AAAATCTTTAATAAAGTCCACATTTCTCAGCCT------GGCATTCAAATACTCTTCCCAATTTATACTCAACTGACCCTTATTCCACCTTATTTCCCACTAGTCTCTGCCAAACACCTAAAGCTTCAATCAAGTAGAAACCTATGCTTTTATCCCGAGGCATTTTG---------ATCCTTCTCATCACTTCAACTTTGTATTGAGAACTGACGTTCTT--AACTCTTCCCACTACCATCTATGCTTACTCGAATTCTAATTAC---CA-TTAATACAAGGCCCAGATCAA-TGCTGTATTCACCAAGAAGCCTCAGCTTCTCTCTCCTCAGAACTGCCATAATACAATTGTACCTAGTTTT-TTTTTTTTTTCCCc---------aagaagcatttactgagt-tctatta------------------agtgtcaggcactgtgacaagtcagggaatgcaaagatgaaa----aatgactttttctttaaaagttt--aaaactta---ggaagacaaaagtcaatttaaaaatcacaatttatatgttacgtaaacagcagtcagcttacggttctacttgagcctaaatgaaggacacatgaatttggctttgcctagaaaagtccaggaaggcttttcagcagagataagacttaaactgagtgggaaaagatac-taagtgcttgctaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30915042 975 + 46535552 atttcttaatttattctcactacaaccctgtacagtcaggtcaat--tacaaacttcatttgatagatgaggaaactgaaa-ttg-gaggtaaaatgatttattcaag--ACAATTATTA--CAATAAGGATGGCACAATCTTTG----TGCTACCT-----CTTATCTTACTCATCCAACC---AGCTATCAAATCC-----TCTATATTCT--ACCTTCATAATGTCTCCTGAATTAATT-CCC-------CCTCTACATAACCACT------------------------TAAGACTGTTTCCTAA-TCGTCTGCCTGCTCCTCTATTCATCCTGCATATGCTGTGACAGATCAATCTTCTCCGAGCACAATTCTGCTCACTT-CATTTACTTGCTC-AAAATCTTTAATAAAGTCCATATTTCTCAGCCT------GGCATTCAAATACTCTTCCCAATTTATACTCAACTGACCCTTATTCCACCTTATTTCCCACTAGTCTCTGCCAAACACCTAAAGCTTCAGTCAAGTAGAAACCTATGCTTTTATCCCGAGGCATTTTG---------ATCCTTCTCATCACTTCAACTTTGTACTGAGAACTGACGTTGTT--AACTCTTCCCACTACCATCTGTGCTTACTCGAATTCTAATTAC---CA-TTAATACAAGGCCCAGATCAA-TGCTGTATTCACCAAGAAGCCTCAGCTTCTCTCTCCTCAGAACTGCCATAATACAATTGTACCTAGTTTTATTTTTTTTCTCCtc---------aagaagcattgactgagt-tctatta------------------agtgtcaggcactgtgacaagtcagggaatgcaaagatgaaa----aatgactttttctttaaaagttt--aaaactta---ggaagacaaaagtgaatttaaaaatcacaatgtatatgttacataaacagcagtcagcttagggttctacctgagcctaaatgaaggacacacaaatttggctttgcctagaaaagtccaggaaggcttttcagcagagataagacttagactgagtggg-aaagatgC-TAAGTGCCTGCTAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100465848 977 - 115148730 atttcttaatttattctcactacaaccctgtacagtcaggtcaat--tataagcctcatttgatagatgaggaagctgaaa-tcg-gaggtaaaatgatttattcaag--ACAATTATTA--CAATAAGGATGGCACAATCTTTG----TGCTACCT-----CTTATCTTACTCATCCAACC---AGCTGTCAAATCC-----TCTATATTCT--ACCTTCATAATGTCTCCTGAATTCATTCCCC-------CCTCTACATAACCACT------------------------TAAGACTATTTCCTAA-TCTTCTGCCTGCTTCTCTATTCATCATGCATACTCTGTGACAGATCAATCTTCTCGGAGCACAATTCTGCTCACTT-CATTTACTTGCTC-AAAATCTTTAATAAAGTCCATATGTGTCAGCCT------GGCATTCAAATACTCTTCCCAATTTATGGTCAACTGACCCTTATTCCACCTTATTTCCCACTAGTCTCTGCCAAACACCTAAAGCTTCAGTCAAGTAGAAACCTATGCTTTTATCCTGAGGCATTTTG---------ATCCTTCTCATCACTTCAACTTTGTAGTGAGAACTGACGTTTTT--AACTCTTCCCACTACCATCTATGCTTACTTGAATTTTAATTAC---CA-TTAATACAAGGCCCAGATCAA-TGCTGTATTCACCAAGAAGCCTCAGCTTCTCTCTCCTCAGAACTGCCATAATACAATTGTACCTAGTTTT-ATTTTTTTTTCCCc---------aagaagcatttactgagtatctatta------------------agtgtcaggcactgtgacaagtcagggaatgcaaagatgaaa----aatgacttcttcttttaaagttt--aaaactta---ggaagacaaaagtcaatttaaaaatcacaatttatatgttacataaacagcagtcagcttagggttatacttgagcctaaatgaaggacacacaaatttggctttgcctagaaaagtccaggaaggctttttggcagagataagacttagattgagtgggaaaagatgc-taagtgcttgctaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80618182 980 + 95678458 atttcttaatttattctcaccacaaccctgtacagtcaggttgat--tataaatttcatttgatagatgaggaaactgaaacttg-aaggtaaaatggtttattcaag--ACAATTATTA--CAATAAGGATGGCACAATCTTTG----TGCTACCT-----CTTATCTTACTCATCCAACC---AGTTGTCAAATCC-----TCTATATTTT--ACCTTTATAATGTCTCCTGAATTCATTCCCC-------ACTCTACATAACCACT------------------------TAAGACTGTTTCCCAA-TCATCTGCCTGCTCCTCTATTCATCCTGCATATGCTGTGACAGATCAATCTTCTCTGAGCACAATTCTGCTCACTT-CATTTACTTGCTC-AAAATCTTCAATAAAGTCCATATTTCTCAGCCT------GGCATTCAAATACTCTTCCCAATTTATACTCAACTGACCCTTAGTCCACCTTATTTCCCACTAGTCTCTGCCAAACACCTAAAGCTTCAGTCAAGTAGAAACCTATGCTTTTATCCCAAGACATTTTG---------ATCCTTCTCATCACTTCAACTTTATATTGAGAACTGACGTTCTT--AACTCTTCCCGCTACCATCTCTGCTTACTTGAATTCTAATTAC---CA-TTAATA-AAGGCCCAGATCAA-TGCTGTATTCACCAAGAAGCCTCAGCTTCTCTCTCCTCAGAACTGCCATAATACACTTGTACCTAG-TTT-TATTTTTTTTCCCc---------aagaagcatttactgagtatctatta------------------agtgtcaggtatggtgatatgtcagggaatgcaaagatgaacaaataatcaccttttctttgaaagttt--aaaactta---ggaagacaaaagtcaatttaaaaatcacaatttatatgttatataaacagcagtcagcttagggttctacttgagcctaaatgaaacacagacaaatttggctttgcctagaagagtccaggaaggcttttcagcagagataagacttggactgagTGGGAAAAGACGC-TAAGTGCTTGCTAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81044905 980 - 96509753 atttcttaatttattctcaccacaaccctgtacagtcaggttgat--tataaatttcatttgatagatgaggaaactgaaacttg-aaggtaaaatggtttattcaag--ACAATTATTA--CAATAAGGATGGCACAATCTTTG----TGCTACCT-----CTTATCTTACTCATCCAACC---AGTTGTCAAATCC-----TCTATATTTT--ACCTTTATAATGTCTCCTGAATTCATTCCCC-------ACTCTACATAACCACT------------------------TAAGACTGTTTCCCAA-TCATCTGCCTGCTCCTCTATTCATCCTGCATATGCTGTGACAGATCAATCTTCTCTGAGCACAATTCTGCTCACTT-CATTTACTTGCTC-AAAATCTTCAATAAAGTCCGTATTTCTCAGCCT------GGCATTCAAATACTCTTCCCAATTTATACTCAACTGACCTTTAGTCCACCTTATTTCCCACTAGTCTCTGCCAAACACCTAAAGCTTCAGTCAAGTAGAAACCTATGCTTTTATCCCAAGACATTTTG---------ATCCTTCTCATCACTTCAACTTTATATTGAGAACTGACGTTCTT--AACTCTTCCCGCTACCATCTCTGCTTACTTGAATTCTAATTAC---CA-TTAATA-AAGGCCCAGATCAA-TGCTGTATTCACCAAGAAGCCTCAGCTTCTCTCTCCTCAGAACTGCCATAATACACTTGTACCTAG-TTT-TATTTTTTTTCCCc---------aagaagcatttactgagtatctatta------------------agtgtcaggtatggtgatatgtcagggaatgcaaagatgaacaaataatcaccttttctttgaaagttt--aaaactta---ggaagacaaaagtcaatttaaaaatcacaatttatatgttatataaacagcagtcagcttagggttctacttgagcctaaatgaaacacagacaaatttggctttgcctagaagagtccaggaaggcttttcagcagagataagacttggactgagTGGGAAAAGACGC-TAAGTGCTTGCTAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76302700 979 + 90941950 atttcttaatttattctcACCACAACCCTGTACAGTCAGGTTGAT--TATAAATTTcatttgatagatgaggaaactgaaacttg-aAGGTAAAATGGTTTATTCAAG--ACAATTATTA--CAATAAGGATGGCACAATCTTTG----TGCTACCT-----CTTATCTTACTCATCCAACC---AGCTGTCAAATCC-----TCTATATTTT--ACCTTTATAATGTCTCCTGAATTTATTCCCC-------TCTCTACATAACCACT------------------------TAAGACTGTTTCCCAA-TCGTCTGCCTGCTCCTCTATTCATCCTGCATATGCTGTGACAGATCAATCTTCTCTGAGCACAATTCTGCTCACTT-CATTTACTTGCTC-AAAATCTTCAATAAAGTCCATATTTCTCAGGCT------GGCATTCAAATACTCTTCCCAATTTATACTCAACTGACCCTTAGTCCACCTTATTTCCCACTGGTCTCTGCCAAACACCTAAAGCTTCAGTTAAGTAGAAACCTATGCTTTTATCCCGAGACATTTTG---------ATCCTTCTCATCACTTCAACTTTATATTGAGAACTGACGTTCTT--AACTCTTCCCGCTACCATCTCTGCTTACTTGAATTCTAATTAC---CA-TTAATA-AAGGCCCAGATCAA-TGCTGTATTCACCAAGAAGCCTCAGCTTCTCTCTCCTCAGAACTGCCATAATACGCTTGtacctag-ttt-tatttttttt-ccc---------aagaagcatttactgagtatctattA------------------AGTGTCAGGTATGGTGATATGTCAGGGAATGCAAAGATGAACAAATAATGACCTTTTCTTTGAAAGTTT--AAAACTTA---GGAAGacaaaagtcaatttaaaaatcacaatttatatgttatataaacagCAGTCAGCTTAGGGTTCTACTTGAGCCTAAATGAAACACAGACAAATTTGGCTTTGCCTAGAAGAGTCCAGGAAGGCTTTTCAGCAGAGATAAGACTTGGACTGAGTGGGAAAAGACGC-TAAGTGCTTGCTAA i papAnu2.chr10 C 0 I 122 s chlSab2.chr19 18571193 980 + 33263144 atttcttaatttattctcaccacaaccctgtacagtcaggttgat--tataaatttcatttgatagatgaggaaactgaaacttg-aaggtaaaatggtttattcaag--ACAATTATTA--CAATAAGGATGGCACAATCTTTG----TGCTACCT-----CTTATCTTACTCATCCAACC---AGCTGTCAAATCC-----TCTATATTTT--ACCTTTATAATGTCTCCTGAATTCATTCCCC-------TCTCTGCATAACCACT------------------------TAAGACTGTTTCCCAA-TCGTCTGCCTGCTCCTCTATTCATCCTGCATATGCTGTGACAGATCAATCTTCTCTGAGCACAATTCTGCTCACTT-CATTTACTTGCTC-AAAATCTTCAATAAAGTCCATATTTCTCAGTCT------GGCACTCAAACACTCTTCCCAATTTATACTCAACTGACCCTTAGTCCACCTTATTTCCTACTAGTCTCTGCCAAACACCTAAAGCTTCAGTCAAGTAGAAACCCATGCTTTTATCCCAAGACATTTTG---------ATCCTTCTCATCACTTCAACTTTATATTGAGAACTGACGTTCTT--AACTCTTCCCGCTACCATCTCTGCTTACTTGAATTCTAATTAC---CA-TTAATA-AAGGCCCAGATCAA-TGCTGTATTCACCAAGAAGCCTCAGCTTCTCTCTCCTCAGAACTGCCATAATACGCTTGTACCTAG-TTT-TATTTTTTTTCCtc---------aagaagcatttactgagtatctatta------------------agtgtcaggtatggtgatatgtcagggaatgcaaagatgaacaaataatgaccttttctttaaaagttt--aaaactta---ggaagacaaaagtcaatttaaaaatcataatttatatgttatataaacagcagtcagcttagggttctatttgaacctaaatgaaagacagacaaatttggctttgcctagaaaagtccaggaaggcttttcagcagagataagacttggactgagtgggaaaagatgc-taagtgcttgctaa i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198272893 1018 + 210400635 atttc-taatttattctcaccacaaccctgtatagtcaggtcgat--tatcaacttca-ttgatagatgaggaaactgaacttgg-gaggtaaaatggtttattcaag--ACAATTATTA--CAATAAGGATGGCACAGTCTTTG----TTCTACCT-----CTCATTTTACTCATCGAATC---AGCTGTCAAATCC-----TCTATGGTCT--ACCTTCATAATGTCCCCTGAATTCATCCCCCCACTCCGCCGCTACATAACCACT------------------------TAAGACTGTTTCCTAA-CCATCTGCCTGCTCCTCTATTTATCCTGCATACGCTGTCACAGATCAATCTTCTCTGAGCACAATTCTGCTCATTT-CATTTACTCATGC-AAAATCTTCAATAAAGTCCTTATTTCTGAGCCT------GGCGTTCAAATACTCTTCCCAATTTGTAGTCAACTGACACTTATTTCACTTTATTTCCCACTAGTCTCTGCCAAACACCTAAAGCTTCGGTCAAGTAGAAATCTATGCTTTTATCCAGAGACATTTTGATCTTTCTCATCTTTCTCATCACTTCAACTTTGTATTGAGAACTGACATACTTAAAACTCTTCGCACTACCATCTATGCTTACTTGAATTCTAATTAC---CA-CTAATACAAGGCCCAGATCAA-TGCTGTATTCTCGAAGAAACCTCAGCTTCTTTCTCCTCAGAACTGCCATAGTACACTTGTATGTAG-TTT-TATTTTTTTTCCCCCAA-----GAAGAAGCATTTACTGAATATCTATAAATTCAGTAATTTATAGATATTATAAATTACtgtgataagttagggaatgcaaagatgaacaaa-aatgactttttctttaaaagctt--acaactta---ggaagacaaaagtgaatttaaaaatcacaatttatatgttatataaacagtcgtcagcttagggttctacttgagcctaaatgaaggacacacaaatttggatttgcctagaaaagtccaggaagacctctgagcagagatgagacttgggctgagtggaaaaagatgC-TAAGTGCTTGTGAA i calJac3.chr1 C 0 C 0 s mm10.chr15 77126774 791 + 104043685 ATTTC-TAGTTTATGCTCGATGTACTCcag----gtcaggtggctg-cactagcttcatttcacagagaaggaaagtgaaaccca-gagataatgtgatttactaaag--ACACTCTTTGACCAATAC--ATGGC---------T----AGCTACCTGCCTACTTACTTTACTGGTCCAATTCTGCACTCTTGAACTCATTTTTCTCTACACA--GCCACCATGACCTCTAGTG---------CAA-------ACCACACAGGACTCAC------------------------TATAGCTGTGGCC-AC-TCTCACTCCAGCTCCTGTACTCCTGCTGCCTAGGCTGTAA----------------GATCAC-ATTCTACTCATTT-CATATCCTTCCTC-AAAACCTCC---AAGTCCCCTCTCCCCCAGTCTTATCGCAGTGTCCAAAAGCTCTTACCAACTTGTGCTCAAAGGA------------TTTTTCTCCTACAGGCCTTCATCAAAACCCTGAA-CTTTGTCCAAATGGGAATCCATGCTTTGGTCT--AGACATTTTG---------A----TTTCTTCTCTTCAACACTGAACCAAGAACCGAT-TTCTT--AATCCTTCATACTACCATTTACTCAGGCCTGAAACTCTACTGCTGATA-TAAATACAAGGCCCAGATCAATTAGAATCTTTACCAGGAA--CCCAGCTTCTCCCTCCTGAGA-----------ACATCTGCATCTTG-TTG-CATCTTTTCTCC-----------AAGAAGCATT---------------G------------------AGCGTCTGACACTGTGAGATGTTATGGGATGCAGAGATGAACAAA-GAAAACTTTTTCTTTGGAGGCTTCAGAAAGTCA---GGAAGA-------------------------TTTTCTGGTA-ACAAGCA-------------------------------------------------------TACCTATA-----------------------------------TAGGCTGAGT--AACATGATGC-TCACAGCCTGG--- i mm10.chr15 I 94 C 0 s canFam3.chr10 40891296 980 - 69331447 atttc-taatttcctttcaatacaatctt-----gtcaggtagacactgttggcttcatgtgacagatgaggaatctgaagtttgagaggtgaaatgatttattcaagatacagttCTTG--CACTGAAGAGGACACAGTCTTTGGCTCTGCT-CTC-----CTTATTTTACTCATTTAATC---AGCTGTCAAATTC-----TATGGATTCTACACCTTGGCAATTTCTCTTCCATTCATC-CCT-------CCTCTACATAACCACTGCAGCCCCCTAGTTCGGAACCTCCTAAGATTCTTTCCTAACTGGTTTCCCTGCCTCTCCCCTCAGCTGCTATA---TGTCACAGATTGGTCTGG---AAGCACAGTTCTGTTCAATTCCATTTCCTTGCTCAAAAACCTTCAATAAAGTC---ATTTCTCAACTA------GGCATTCAAATGCTCTTCCCAATTTGTACTGGAGCGATTTTTCTCACATCATATTTCCTTAT-GTATCCACCAAACACCCCAAGCTTCAGCCTAACAGAAACACATGCTTTTATTC--ACACACTTTG---------ATATTGCCCATCTCTCTAATTCTGCTTTGAGAAAGGACTTTCTC--AATTCTTCCCATCA-----------TGTTCCAATTCCAA--AC---CACTTAATACCAGGACGAGTTCGA-TGCCACCTGCGCTTAGAAGCCTCAGCTTCTCCCTCCTCAGACCTTCCATGGTA------TACCTTG-TCT-CCTTTAAACACTCCTGACCGCCAGAGAAATTGttactgagtaactatta------------------agtgccaggcactgtaataagtcggagaatgcaaagatgaac----tagaactttttctttaaaagctt--acagtttaattagaagacaaaagtgaac----aaaacacatctcctaagttccataaaaagtggtcagctcaggagtctacctgagcctaaatgaaggata----agcttggctttatctagaata-ttgagcaaggcgtaccagcaaagccaacac-ggggctgaATGGGAAAAGATGCACTGGTGCCTGTTAT i canFam3.chr10 C 0 C 0 a score=46799.000000 s hg38.chr22_KI270876v1_alt 121994 14 + 263666 gaggaCTAGTGAAT s panTro4.chr22 34499983 14 + 49737984 gaggaCTAGTGAAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30916017 14 + 46535552 GAGGACCAGTGAAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100466825 14 - 115148730 gaggaCCAGTGAAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80619162 14 + 95678458 GACGACCAGTGAAT i rheMac3.chr10 C 0 I 297 s macFas5.chr10 81045885 14 - 96509753 GACGACCAGTGAAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76303801 14 + 90941950 GAGGACCAGTGAAC i papAnu2.chr10 I 122 C 0 s chlSab2.chr19 18572173 14 + 33263144 gaggaCCAGTGAAC i chlSab2.chr19 C 0 I 120 s calJac3.chr1 198273911 14 + 210400635 GAGGCCAAGTGAAT i calJac3.chr1 C 0 C 0 s mm10.chr15 77127565 14 + 104043685 GAAGATTAATAAAT i mm10.chr15 C 0 C 0 s canFam3.chr10 40892276 14 - 69331447 CAGGACCACTGCTT i canFam3.chr10 C 0 C 0 a score=26631.000000 s hg38.chr22_KI270876v1_alt 122008 11 + 263666 ATACACAGTAC s panTro4.chr22 34499997 11 + 49737984 ATACACAGTAC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30916031 11 + 46535552 ATACACAGTTC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100466839 11 - 115148730 ATACACAGTAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80619473 11 + 95678458 ATACACAGTAT i rheMac3.chr10 I 297 C 0 s macFas5.chr10 81045899 11 - 96509753 ACGCACAGTAC i macFas5.chr10 C 0 I 179 s papAnu2.chr10 76303815 11 + 90941950 ACGCACAGTAC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18572307 11 + 33263144 ATACACAGTAC i chlSab2.chr19 I 120 C 0 s calJac3.chr1 198273925 11 + 210400635 ATATATAGCAC i calJac3.chr1 C 0 C 0 s mm10.chr15 77127579 7 + 104043685 ATGCACA---- i mm10.chr15 C 0 C 0 s canFam3.chr10 40892290 8 - 69331447 ATACATAC--- i canFam3.chr10 C 0 C 0 a score=975904.000000 s hg38.chr22_KI270876v1_alt 122019 302 + 263666 ACCATCTTCTTTCACTACGTTGAATATGGGGAGTCGGAGTGGTAGAACGAAGATTACGGACTTAGAAttccccatctgtaaaaactctaatatatcccaaagggatattttataaaccataataaaatattgtttgtgaaagcaatttttaaactgaaaagtgagatacaaatttgaggtatcattaataAATCTGTAAATAACAACGCTTCCTGTCTAACTTTTAGATTTAATTGGCCACATGAATTACTAGACCATTGTTTTTAATTGATGAGTAATCAAACTGGATAGACCATTTTAAG s panTro4.chr22 34500008 302 + 49737984 ACCATCTTCTTTCACTATGTTGAATATGGGGAGTCGGAGTGGTAGAACGAAGATTATGGACTTAGAAttccccatctgtaaaaactctaatataccccaaagggatattttacaaaccacaataaaatattgtttgtgaaagcaatttttaaactgaaaagtgagatacaaatttgaggtatcattaataAATCTGTAAATAACAACGCTTCCTATCTAACTTTTAGATTTAATTGGCCACATGAATTACTAGACCATTGTTTTTAACTGATGAGTAATCAAACTGGATAGACCATTTTAAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30916042 280 + 46535552 ACCATCTTCTCTCACTATGTTGAGTATGGGGAGTCGGAGTGGTAGAACGAAGATCACGGACTTAGAAT----------------------CAtaccccaaagggatatttcacaaaccacaataaaatattgtttgtgaaagcaatttttaaactgaaaagtgagatacaaatttgaggtatcattattaAATCTGTAAATAACAACGCTTCCTATCTAACTTTTAGATTTAATTGGCCACATGAATTACTAGATCATTGTTTTCAACTGATGAGTAATCAAACTGGATAGACCATTTTAAG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100466850 302 - 115148730 ACCATCTTCTTTCACTATGTTGAATATGGGAAGTCGGAGTGGTAGAACAAAGATCACGGACTTAGAAttccccatctgtaaaaactctaatataccccaaagggatattttataaaccacaataaaatattgtttgtgaaagcaatttttaaactgaaaagtgagatacaaatttgaggtatcattaataAATCTGTAAATAACAACGCTTCCTATCTAACTTTTAGATTTAATTGGCCACATGAATTACTAGACCATTGTTTTTAACTGATGAGTAATCAAACTGGATAGACCATTTTAAG i nomLeu3.chr7b C 0 I 294 s rheMac3.chr10 80619484 302 + 95678458 ACAGTCTTCTCTCGCTATGTTGAATATGGGGAGTCGGAGTGGTAGAACAAAGATCATGGACTTAGAAttccccatctgtaaaaaccctactataccccaaagggatattttacaaaccacaataaaatattgtttgtgaaagcaatttttaaactgaaaagtgacatataaatttgaggtatcattaataCATCTGTAAATAACAACGCTTCCTATCTAACTTTTAGATTTAACTGGCCACATGAATTACTAGATCATTGTTTTTAACTGATGAGTTATCAAACTGGATAGACTATTTTAAG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81046089 302 - 96509753 ACAGTCTTCTCTCGCTATGTTGAATATGGGGAGTCGGAGTGGTAGAACAAAGATCATGGACTTAGAATTCCCCATCTGTAAAAAccctactataccccaaagggatattttacaaaccacaataaaatattgtttgtgaaagcaatttttaaactgaaaagtgacatataaatttgaggtatcattaataCATCTGTAAATAACAACGCTTCCTATCTAACTTTTAGATTTAACTGGCCACATGAATTACTAGATCATTGTTTTTAACTGATGAGTTATCAAACTGGATAGACTATTTTAAG i macFas5.chr10 I 179 C 0 s papAnu2.chr10 76303826 302 + 90941950 ACAGTCTTCTCTCGCTATGTTGAATATGGGGAGTCGGAGTGGTAGAACAAAGATCATGGACTTAGaattccccatctgtaaaaaccCTACTATACCCCAAAGGGATATTTTacaaaccacaataaaatattgtttgtgaaagcaatttttaaactgaaaagtGACATATAAATTTGAGGTATCATTAATACATCTGTAAATAACAATGCTTCCTATCTAACTTTTAGATTTAATTGGCCACATGAATTACTAGATCATTGTTTTTAACTGATGAGTTATCAAACTGGATAGACTATTTTAAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18572318 300 + 33263144 ACAGTCTTCTCTCGCTATGTTGAATATGGGGAGTCGGAGTGGTAGAACAAAGATCATGGACTTAGAATTCCCCATCTATAAAAAccctactataccccaaagggatattttacaaaccacaataaaatactgtttgtgaaagcaatttttaaactgaaaagtgac--ataaatttgaggtatcattaataCATCTGTAAATAACAATGCTTCCTATCTAACTTTTAGATTTAATTGGCCACATGAATTACTAGATCATTGTTTTTAACTGATGAGTTATCAAACTGGATAGACTATTTTAAG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198273936 302 + 210400635 ACAATCTTCTTTCACTAAGTTGAATATGAGGAGTCAGAGTTATAGTGCGAAGATCAAGCACTTAGAATTCCCTAACTGTAAAAgccctaatataccccaaagggatattttataaactacaataaaatactgtttgtgaaaacaatttttaaactgaaaagtgggatataaatttaagATATCAATAATAAATCTGTAAATAACAACACTTCCTATCTAACTTTTGGATTTAATGGGCCACATGAATTACTAGACCACTGTTTTTAACTGATGAGTAATAAAACCAGATAGACCATTTTAAG i calJac3.chr1 C 0 C 0 s mm10.chr15 77127586 202 + 104043685 -TAATC-TATTTCACT--------------GGGTCTGAGTGGT------GAGGGTGTAGATCTTTAATTCCCCACTT------------------------GGGCTGTTTTACAAGCCACAATCAAACA--ATTCGAAGAAGCA--TTTTAAACTGAAAGGTGCTATGCAAACTTAGGTTATGATTAATTAATTTG------------CTTCCTAGATGCCTCTTGGATTTAATTGGCCATATGAACTGC--------------------------------------TAGACTGTTTTATG i mm10.chr15 C 0 C 0 s canFam3.chr10 40892298 197 - 69331447 ACTATCTCCTGTTGTTGGGCTGGAGTTGGGGAGTCCACGTGGCAAAATGGAGAGAATGGACTCTGAATTCCCCGACTGTAAAA-CCCTCATATA-CACAAAAGACTAGTTTA--------------------------------------------------------------TGAGGTATCATT----TCTTTATAAATAACAATGCTTCCGATCAACCTTCTGAATTTAATTGGCCACAGGAATTACCGGAT-------------------------------------CCATTTTAAG i canFam3.chr10 C 0 C 0 a score=225111.000000 s hg38.chr22_KI270876v1_alt 122321 63 + 263666 AGACATATAGGCAGATAGT--AAGTTTAATAAAATAACCTA-AATATTGTCAAATCTAGGTTTTAC s panTro4.chr22 34500310 63 + 49737984 AGACATATAGGCAGAGAGT--AAGTTTAATAAAATAACCTA-AATATTGTCAAATCTAGGTTTTAC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30916322 65 + 46535552 AGACATATAGGCAGATAGTAAAAGTTTAATAAAATAACCTA-AATATTGTCAAATCTAGGTTTTAC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100467446 63 - 115148730 aGACATACAGGCAGATAGTAAAAGTCTAATAAAAT-ACCTA-AATATTGTC-AATCTAGGTTTTAC i nomLeu3.chr7b I 294 C 0 s rheMac3.chr10 80619786 64 + 95678458 AGACATACAGGCAGATAGTAAAAGTTTAATAAAATAAACTA-AA-ATTGTCAAGTCTAGGTTTTAC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81046391 64 - 96509753 AGACATACAGGCAGATAGTAAAAGTTTAATAAAATAAACTA-AA-ATTGTCAAGTCTAGGTTTTAC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76304128 64 + 90941950 AGACATACAGGCAGAtagtaaaagtttaataaaataaacta-aa-attgtcAAGTCTAGGTTTTAC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18572618 64 + 33263144 AGACATACAGGCAGATAGTAAAAGTTTAATAAAATAAACTA-AA-ATTGTCAAGTCTAGGTTTTAC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198274238 65 + 210400635 AGACATATAAGCAGATAGGAAATGTTTAATTAAATAATCTA-AATATTGTCAAATCTAGGTTTTAT i calJac3.chr1 C 0 C 0 s mm10.chr15 77127788 57 + 104043685 AGACACATAAGCAGATGGTAAAAGTTTAGTAGAATA---------AATGTTACATCTAAGTTTTAC i mm10.chr15 C 0 I 2759 s canFam3.chr10 40892495 65 - 69331447 -AACATATTAGTAGATAGTAAAAGTTTAACAAAATAATCTATAATATTGTCAAATCTAAGTTCTTT i canFam3.chr10 C 0 C 0 a score=333313.000000 s hg38.chr22_KI270876v1_alt 122384 143 + 263666 AATGTATTGCTCAACTGTTCAAA----CTCTCTATATacaacacatacacacacacacacacacactctctctctctctctctctccctcCCCCCGCCAAAAGTAAATAAATGGCTTATGAGCAGTGAATTCACCCTCACATTTAAA s panTro4.chr22 34500373 133 + 49737984 AATGTATTGCTCAACTGTTCAAA----CTCTCTATATACA----------ACACACACACACACActctctctctctctctctctccctcCCCCCGCCAAAAGTAAATAAATGGCTTATGAGCAGTGAATTCACCCTCACATTTAAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30916387 124 + 46535552 AATGTATTGCTCAACTGTTCAAA------CTCTATATACAacacacacacacacacacacacacacacacTCTCTCTCC-----------------CCAAAAGTAAATAAATGGCTTATGAGCAGTGAATTCACCCTCACATTTAAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100467509 126 - 115148730 AATGTATTGCTCAACTGTTCAAA----CTCTCTATATacaacacatacacacacacactcactcactctctctctcCCC-----------------CCAAAAGTAAATAAATGGCTTATGAGCAGTGAATTCACCCTCACATTTAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80619850 116 + 95678458 AATGCATTGCTCAACTGTTCAAAC--TCTCTCTATATACA----------ACACATACACACACACTCTCTCTTTCT-------------------ACAAAGGTAAATAAATGGCTTATGAGCAGTGAATTCACCCTCACATTTAAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81046455 116 - 96509753 AATGCATTGCTCAACTGTTCAAAC--TCTCTCTATATACA----------ACACATACACACACACACTCTCTTTCT-------------------ACAAAGGTAAATAAATGGCTTATGAGCAGTGAATTCACCCTCACATTTAAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76304192 116 + 90941950 AATGCATTGCTCAACTGTTCAAAc--tctctctatataca----------acacatacacacacactctctctctct-------------------acaaaGGTAAATAAATGGCTTATGAGCAGTGAATTCACCCTCACATTTAAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18572682 112 + 33263144 AATGCATTGCTCAACTGTTCAAA------CTCTATATACA----------ACACATACACACACACTCTCTCTCTCT-------------------ACAAAGGTAAATAAATGGCTTATGAGCAGTGAATTCACCCTCACATTTAAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198274303 112 + 210400635 GATGTACTGCTCAACTGTTCAAAC--TCTATCTATATACA----------ACACATACACACATACGCTCTCT-----------------------CCAAAGGTAAATAAATGGCTTAAGAGCAGTGGATTCACCCTCACATTTAAA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40892560 110 - 69331447 GATGTACTGTTCTACTGCTCAGTCTGTCTCTCGTCCTCCA----------GAACACCCACACATTCACAACTT-----------------------CCAAAAG----CAAATGGCTTAAGAGCAGTGAATTCACACTCCCATTTAAA i canFam3.chr10 C 0 C 0 e mm10.chr15 77127845 2759 + 104043685 I a score=932969.000000 s hg38.chr22_KI270876v1_alt 122527 321 + 263666 ATGTACACTTTTGggccaggcagagtgactcacacctgcaatcccagcactttgggaggctgaggtgggtggatcacttgaggtcaggagttcgagaccaacctggccaacatggtgaaacctcgtctctactaaaaatacagaaattagctgggcatagtggcagacacctgtaaccctagctactcgggaggctaaggcaggagaatcgcttgaacctgggaggctgaggttgcagtgagctgagatcacgccactgcactccagcctgggtgacacagtgagactcggtctcaaaaataagatcaaataaaataaaaT s panTro4.chr22 34500506 321 + 49737984 ATGTACACTTTTGggccaggcagagtgactcacacctgcaatcccagcactttgggaggctgaggtgggtggatcacttgaggtcaggagttcgagaccaacctggccaacatggtgaaacctcgtctctactaaaaatacaaaaattagctgggcatggtggcagacacctgtaaccctagctacttgggaggctaaggcaggagaatcacttgaacctgggaggctgaggttgcagtgagctgagatcacgccactgcactccagcctgggtgacacagtgagactcggtctcaaaaataagatcaaataaaataaaaT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30916511 321 + 46535552 ATGTACACTTTTGggccaggcagagtgactcacacctgcaatcccagcactttgggaggctgaggtgggtggatcacttgaggtcaggagttcgagaccaacctggccaacatggtgaaacctcgtctctactaaaaatacaaaaattagctgggcatggtggcagacacctgtaatcctagctactcgggaggctgaggcaggagaatcgcttgaacccaggaggctgaggttgcagtgagctgagatcacgccactgcactccagcctgggtgacacagtgagcgctggtctcaaaaataagatcaaataaaataaaaT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100467635 319 - 115148730 ATGTACACTTTTGggccaggcagagtgactcacacctgcaatcccagcactttgggaggctgaggtgggtggatcacttgaggtcaggagttcgagaccaacctggccaacatggtgaaacctcgtctctact--aaacacaaaaattagctgggcatggtggcagacacctgtaatcctagctactcgggaggctgaggcaggagaatggcttgaaccccggaggctgaggttgtagtgagctgagatcacgccactgcactccagcctgggtgacacagtgagactcggtctcaaaaaTAAGATCAAATAAAATAAAAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80619966 310 + 95678458 ATGCACACTTTTGggccaggcacagtgactcacgcctgtaatcgcagcactttgggaggctgaggcgggtggatcacttgaggtcaggagttcgagaccaacctggccaacatggtgaaacctcatctctactaaaaacaca-aaattagctgggcatgatggcagacgcctgtaatcccagctacttgggaggctgaggcaggagaatcacttgaacctggtaggcagaggttgcagtgagctgagatcatgccactgcactccagcctgg----------gagactcggtctcaaaaataagatcaaataaaataaaaT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81046571 310 - 96509753 ATGCACACTTTTGggccaggcacagtgactcacgcctgtaatcgcagcactttgggaggttgaggcgggtggatcacttgaggtcaggagttcgagaccaacctggccaacatggtgaaacctcatctctactaaaaacaca-aaattagctgggcatgatggcagacgcctgtaatcccagctacttgggaggctgaggcaggagaatcacttgaacctggtaggcagaggttgcagtgagctgagatcatgccactgcactccagcctgg----------gagactcggtctcaaaaaTAAGATCAAATAAAATAAAAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76304308 310 + 90941950 ATGCAcacttttgggccaggcacagtgactcacgcctgtaatcgcagcactttgggaggctgaggcgggtggatcacttgaggtcaggagttcgagaccaacctggccaacatggtgaaacctcatctctactaaaaacaca-aaattagctgggcatgatggcagacgcctgtaatcccagctacttgggaggctgaggcaggagaatcacttgaacctggtaggcagaggctgcagtgagcagagatcacgccactgcactccagcctgg----------gagactcggtctcaaaaataagatcaaatcaaataaaat i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18572794 310 + 33263144 ATGCACACTTTTGggccaggcacagtgactcacgcctgtaatcccagcactttgggaggctgaggagggtggatcacttgaggtcgggagttcgagaccaacctggccaacatggtgaaacctcatctctactaaaaacaca-aaattagctgggcatggtggcagacgcctataatcccagctacttgggaggctgaggcaggagaatcacttgaacctgctaggcagaggttgcagtgagctgagatcacgccactgcgctccagcctgg----------gagacttggtctcaaaaataagatcaaataaaataaaaT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198274415 319 + 210400635 GTATACACTTTTGggccagaaacagtaactcaca-ctgtaatcccagcactttgggaggctgaggtgagtggatcacttgaggtcaggcgtttgagaccagcctggccaacacggtgaaaccccgtctctactaaaaatacaaaagttagccaggcatggtggcagatgcctgtaatcccagctgcttgggaggctgaggcaggagaatcatttgaactcagctggcagaggttgcaatgagctgagatcatgccactgcactccagcctgggccacatggtaagactctatctcaaaaataaaat-aaataaaataaaaT i calJac3.chr1 C 0 C 0 e mm10.chr15 77127845 2759 + 104043685 I e canFam3.chr10 40892670 0 - 69331447 C a score=729937.000000 s hg38.chr22_KI270876v1_alt 122848 223 + 263666 GTACACTTAAAAAAA----AAGCATCTTTCAACCAGAGCATCCTAAAAATTTCTCATTTTATTGTTAACAGCTTCCTGAAATTATAGAACTTGTGCTATCTCTGTTCACAGGCACAAATCAAAGGATTTTCCA-TTTTCTCTTCATCTATTTTTGGCAGCGATAAACTTATACTCTATACATATGGGT-----------------TATCTCTTTAGGAACTCAAATTGGTTGACATA---CAAAATTT s panTro4.chr22 34500827 223 + 49737984 GTACACTTAAAAAAA----AAGCATCTTTCAACCAGAGCATCCTAAAAATTTCTCATTTTATTGTTAACAACTTCCTGAAATTATAGAACTTGTGTTATCTCTGTTCACAGGCACAAATCAAAGGATTTTCCA-TTTTCTCTTCATCTATTTTTGGCAGCGATAAACTTATACTCTATACATATGGGT-----------------TATCTCTTTAGGAACTCAAATTGGTTGACATA---CAAAATTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30916832 226 + 46535552 GTACACTTAAAAAAA-AAGAAGCATCTTTCAACCAGAACATCCTAAAAATTTCTCATTTTATTGTTAACAACTTCCTGAAATTATAGAACTTGTGCTATCTCTGTTCACAGGCACAAATCAAAGGATTTTCCA-TTTTTTCTTCATCTATTTTTGGCAGCAATAAACTTATAATCTAAACATATGGGT-----------------TATCTCTTTAGGAACTGAAATTGGTTGACATA---CAAAATTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100467954 226 - 115148730 GTACACTTAAAAAAA-AAGAAGCATCTTTCAACCAGAGCATCCTAAAAATTTCTCCTTTTATTGTTAACAACTTCCTGAAATTATAGAACTTGTGCTATCTCTGTTCACAGGCACAAATTAAAGGATTTTCCA-TTTTCTCTTCATCTATTTTTGGCAGCGATAAACTTACAATCTATACATATGGGT-----------------TATCTCTTTAGGAACTCAAATTGGTTGACATA---CAAAATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80620276 223 + 95678458 GTACACTTAAAAAAA-AAGAAGCATCTTTCAACCAGAGCATCCTAAAAATTTCTCATT---TTGTTAACAACTTCCTGAAATTATAGAACTTGTGCTATCTCTGTTCACAGGCACAAATCAAAGGATTTTCCA-TTTTCTCTTCAGCTATTTTTGGCAGCAGCAAACTTACAATCTATACACATGGAT-----------------GATCTCTTTAGGAACTCAAATTAGTTGACATA---CAAAATTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81046881 223 - 96509753 GTACACTTAAAAAAA-AAGAAGCATCTTTCAACCAGAGCATCCTAAAAATTTCTCATT---TTGTTAACAACTTCCTGAAATTATAGAACTTGTGCTATCTCTGTTCACAGGCACAAATCAAAGGATTTTCCA-TTTTCTCTTCAGCTATTTTTGGCAGCAACAAACTTACAATCTATACACATGGAT-----------------GATCTCTTTAGGAACTCAAATTAGTTGACATA---CAAAATTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76304618 223 + 90941950 gtacacttaaaaaaa-aagaagcatcttTCAACCAGAGCATCctaaaaatttctcatt---ttgttaacAACTTCCTGAAATTATAGAACTTGTGCTATCTCTGTTCACAGGCACAAATCAAAggattttcca-ttttctcttcagCTATTTTTGGCAGCAATAAACTTACAATCTATACACATGGAT-----------------GATCTCTTTAGGAACTCAAATTAGTTGACATA---CAAAATTT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18573104 223 + 33263144 GTACACTTAAAAAAA-AAGAAGCATCTTTCAACCAGAGCATCCTAAAAATTTCTCATT---TTGTTAACAACTTCCTGAAATTATAGAACTTGTGCTATCTCTGTTCACAGGCACAAATCAAAGGATTTTCCA-TTTTCTCTTCAGCTATTTTTGGCAGCAATAAACTTACAATCTATACACATGGAT-----------------GATCTCTTTAGGAACTCAAATTAGTTGACATA---CAAAATTT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198274734 232 + 210400635 GTACTTTAAAAAAAA-AAGAAGCATCTTTCAACCACAGCATCCT-AAAATTTCTCATTTTATTGTTACGAATTTCCTGAAATTATGGAACTTGTACTATCTCTGTTCATAGGCACAACTCAAAG-----------CTCTTCCTCAGCTGTTTTTGGCAGCAATAAATTTACAATCTATACATAGAGATTTCTATTCTTAATTCAGTATCTCTTTAGGAACTCAAACTGGTTGACATG---TAAAATTA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40892670 236 - 69331447 GTACACTTAAACATGTAAGAAGCATC-TCCAACCAGAGCCTCCTAATAATTTCCCATTTTGTGGTTAGCAACTTCCTAAAATTACAGAACGTGTGCCATCTCGGTTGGTAGACATAGCTCAAAGGATTTTCCATTTTTCTCCTCA----------GCACCAATAAA-TCCCAATCCATACACATGGTTTCCTAATTTTATTTTAGTATTTTTTTAGGAACTCAAATTGGTCAATATAATGCAAAATTA i canFam3.chr10 C 0 I 199 e mm10.chr15 77127845 2759 + 104043685 I a score=3979574.000000 s hg38.chr22_KI270876v1_alt 123071 1253 + 263666 CATGGTGAACAGTTTCTGGTATAAATGAGGAATGCAAGTCTTAACtatatatataatgtaaatatatgtatatttacatTAAGGAACAGAACTTGCCCTTAATCACTGTCATTAGAAATATACAACTGGAG-ATCTGAAACAACTGAAAATGGTAGCAATAAAGGAAAAAAG--AGAAACAGAAATGGGCAATGATGAGGAGATATGTAGTAAGTAATTTAA----AAATGCCATGCAATGATTCAGGGAAgagacttctggctatgatggtatgaacaggtcagtgaactgtttcctcaaaaggaaatgacag-taagaaagttggac-aaagttgtcaaaaacagccatttcaggattctagaaatcaatcaatggcagacagacaataaat----agatgtcctgagaaattgcttaaacttaggggcaagagcatccaga--------------------------------cacaaactta------------atgcctt------------------aaaacttag-ttttatcaggtgagggctgggaccataaaaaccagcaattttcactgccagagagggcagatctgacttgggacaaggggg-------agattgaaggagtggtagaaaatccatagctctgacagctaaaaggggccaacctggtgggaacctaacagggagaagacattcttctagcttgaggctgt-ggtctgaagagggtgcagtggaagaccagctagaaatctgaaggggagatcctggaaagaaaagagtcacaaaagggccagatatggtctcctcacatccctgggtggctgtgaaactacatggatgaggaagggagacataagaggtctcaacagaaagaaaacccaaggcaggcttaagaactggctgaactttccatgcacttcccaatcaacctggatcatcagagggt-gaaagctcaataagcttcaggtg---tttgaacaccacctctgcactagtcacaggctaaccat---------taagctaggaagacacggg--tgcctcctagccaggctaaaaacaataaaacaacaaatgaaaatcaataagc--------agaaacactagtggccgtatactgtgtgggagtcacatgtcatagtttaagtatgggcaaattacttaaaacacacacacacacacacacac--------acacacacacat-gcccatcacagaaaaataaataa-----caccccacagtcactacaatgcattactaaaatgtccaattttcatt-aaaaaattacaag-catgcaaagaaacagaaaa--gtgacccagattcaagaaaataagcagtaactagaaacagact s panTro4.chr22 34501050 1241 + 49737984 CATGGTGAACAGTTTCTGGTATAAATGAGGAATGCAAGTCTTAACTATATATATAATGTAAATATATGTATATTTACATTAAGGAACAGAACTTGCCCTTAATCACTGTCATTAGAAATATACAACTGGAG-ATCTGAAACAACTGAAAATGGTAGCAATAAAGGAAAAAAG--AGAAACAGAAATGGGCAATGATGAGGAGATATGTAGTAAGTAATTAAA----AAATGCCATGCAATGATTCAGGGAAgagacttctggctatgatggcatgaacaggtcagtgaactgtttcctcaaaaggaaatgacag-taagaaagttggac-aaagttgtcaaaaacagccatttcaggattctagaaatcaatcaatggcagacagacaataaat----agatgtcctgagaaattgcttaaacttaggggcaagagcatccaga--------------------------------cacaaactta------------atgcctt------------------aaaacttag-ttttaccaggggagggctgggaccataaaaaccagcaattttcactgccagagagggcagatctgacttgggacaaggggg-------agattgaaggagtggtagaaaatccatagctctgacagctaaaaggggccaacctggtgggaacctaacagggagaagacattcttctagcttgaggctgt-ggtctgaagagggtgcagtggaagaccagctagaaatctgaaggggagatcctggaaagaaaagagtcacaaaagggccagatatggtctcctcacatccctgggtggctgtgaaactacatggatgaggaagggagacataagaggtctcaatagaaagaaaacccaaggcaggcttaagaactggctgaactttccatgcacttcccaatcaacctggatcatcagagggt-gaaagctcaataagcttcaggtg---tttgaacaccacctctgcactagtcacaggctaaccat---------taagctaggaagacacagg--tgcctcctagccaggctaaaaacaataaaacaacaaatgaaaatcactaagc--------agaaacactagtggccgtatactgtgtgggagtcacatgtcatagtttaagtatgggcaaattacttaaa------------acacacacac--------acacacacacat-gcccatctcagaaaaataaataa-----caccccacagtcactacaatgcattactaaaatgtccaattttcatt-aaaaaattacaag-catgcaaagaaacagaaaa--gtgacccagattcaagaaaataagcagtaactagaaacagact i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30917058 1263 + 46535552 CATGGTGAACAGTTTCTGGTATAAATGAGGAATGTAAGTCTTAACtatatatataatgtaaatata--tatatttaCATTAAGGAACAGAACTTGCCCTTAATCACTGTCATTAGAAATATACAACTGGAG-ATGTTAAACAACAGAAAATAGTAGCAATAAAGGAAAAAAG--AGAAATAGAAATGGGCAATGATGAGGAAATATGTAGTAAGTAATTTAA----AAATGCCATGCAATGATTCAGGGAAGGGACTTCCGGCTATGATGGCATGAACAGGTCAGTGAACTGTTTCCTCAAAAGGAAATGAcag-taagaaagttggac-aaagttgtcaaaaacagctatttcaggattctagaaatcaatcaagggcagacagacaatAAATAGAGAGATGTCCTGAGAAATTGCTTAAACTTAGGGGCAAGAGCATCCAGA--------------------------------CACAAACTTA------------ATGCCTT------------------AAAACTTAG-TTTTATCAGGGGAGGGCTGGGACCATAAAAACCAGCAATTTTCACTGCCAAAGAGGGCAGATCTGACTTGGGACAAGGGGG-------AGATTGAAGGAGTGGTAGAAAATCCATAGCTCTGACAGCTAAAAGGGGCCAACCTAGTGGGAACCTAACAGGGAGAAGACATTCTTCTAGCTTGAGGCTGT-GGTCTGATGAGCGTGCAGTGGAAGACCAGCTAGAAATCTGAAGGGGAGATCCTGGAAAGAAAAGAGTCATAAAAGGCCCAGATACGCTCTCCTCACATCCCTGGGTGGCTGTGAAACTACATGGATCAGGAAGGGAGACATGAGAGGTCTCAATAGAAAGAAAACCCAAGGCAGGCTTAAGAACTGGCTGAACTTTGCATGCACTTCCCAGTCCACCTGGATCATCAGAGGGT-GAAAGCTCAATAAGCTTCAGGTG---TTTGAACACCACCTCTGCACTTGTCACAGGCTAACCAC---------TAAGCTAGGAAGACACAGG--TGCCTCCTAGCCAGGCTAAAAACGATCAAACAGCAAATGAAAATCACTAAGC--------AGAAACACTAGTGGCCGTATGCTGTGTGGGAGTCAGATGTCATAGTTTAAGTATGGGCAAATTACTTAAAacacacacacacacacacacacacacacaaacacacacaTAT-GCCCATCTCAGAAAAATAAATAA-----CACCccacagtcactataatacgttactaaaatgtccaattttcatt-aaaaaattacaag-catgcaaagaaacagaaaa--gtgacccagattcaagaaaataagcagtaactagaaacagact i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100468180 1240 - 115148730 CACGGTGAACGGTTTCCAGTATAAACGAGGAATGTAAGTCTTAACtatatatataatgtaaatatatatatatttacatTAAGGAACAGAACTTGCCCTTAATCACCGTCATTAGAAATATACAACTGGAG-ATCTGAAACAACTGAAAATAGTAGCAATAAAGGAAAAAAG--AGAAATAGAAATGGACAATGATGAGAAGATATGTAGTAAGTAATTAAA----AAATGCCATGCAATGATTCAAGGAAgagacttctggctatgatggcatgaacaggtcagtgaactgtttcctcaaaaggaaatgacag-taagaaagttggac-aaagttgtcaaaaacagcta-ttcaggattctagaaatcaatcaagggcagacagacaataaatagagagatgtcctgagaaattgcttaaacttaggggcaagagcatccaga--------------------------------cacaaactta------------atgcctt------------------aaaacttag-ttttatcaggggagggctgggaccataaaaaccagcaattttcactgccagagaggacagatctgacttgggacaaggggg-------agattgaaggagtggtagaaaatccatagctctgacagctaaaaggggccaacccggtgggaacctaacagagagaagacattcttctggcttgaggctgt-ggtctaatgagggtgcagtggaagaccagctagaaatctgaaggggagatcctggaaagtaaagagtcacaaaagggccggatacgctctcctcacatccctgggtg---------------ggatggggaagggggacatgagaggtctcaatagaaagaaaacccaaggcaggcgtaagaactggctgaactttgcatgcacttcccagtccacctggatcatcagagggt-gaaagctcaataagcttcaggtg---tttgaacaccgcctctgcactagtcacaggctaaccat---------taagctaggaagacacgga--tgcctcctagccaggctaaaaacaataaaacaacaaatgaaaatcactaagc--------agaaacactagtggccatatactatgtgggagtcagatgtcatagtttaagtatgggcaaattacttaaaacacacacacacacacacacacacac----acacacacacac-gcccatctcagaaaaataaataa-----caccccacagtcacta-----cattactaaaatgtccaattttcatt-aaaaaattacaag-catgcaaagaaacagaaaa--gtgacccagattcaagaaaataagcagtaactagaaaccgact i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80620499 1243 + 95678458 CATGGTGAACAGTTTCTGGTATAAATGAAGAATGTAAGTCTTAACtatatatataatgtaaaaatatatatatttaCATTAAGGAACAGAACTTGCCCTTAATCACTGTCATTAGAAATATACAACTGGAG-ATCTGAAACAACTGAAAATAGTAGCAATAAAGGAAAAAAG--ATAAATAGAAATGGGCAATGATGAGGAGCTATGTAGTAAGTAATTATA----AAATGCCATGCAATGATTCAGGGAAgagacttctggctatgatggcatgaacaggtcagtgaattgtttcctt--------acgacag-taagaaagttggac-aaagttgtcaaaaacagctatttaaggattccagaaatcaatcaaaggcatacagacaataaatagagagatgtcctgagaaattgcttaaacttaggggtaagaccatccaga--------------------------------cacaaactta------------atgcctt------------------aaaacttag-tgttatcaggggagggctgggaccat-aaaaccagcaattttcactgccagagagggcaggtctgactttggacaa-gggg-------agatggaaggactggtagaaaatccatagctctgtcagctgaaagaggccaacctggtgggaacctaacagggagaagacattcttctagcttgaggctgt-ggtctgatgagggtgcagtggaagaccagctagaaatctgaaggggagatcctggaaagaaacgagtcataaaagggtcagatttgctctcctcacaaccctgggtggctgtgaaactacatggatgaggaagggagacatgggaggtctcaatagaaagaaaacccaaggcaggcttgagaactggctgagctttgagcgcacttcccaatccacctggatcatcagaaggt-gaaagctcaacaagcttcaggtg---tttgagcaccaactctgcactagtcacaggctaaccat---------taagctagggagacacggg--tgcctcctagccaggctaaaaacagt-----aacaaatgaaaatcactaaga--------agaaacattagtggccacacactgtgtgggagacaaattccatagtttaagtatgggcaaattacttaaaacacacacacacacaaacacaa--------acacacacatat-gcccatctcagaaaaataagtaa-----cacctcacagtcactacagtacattactaaaatgtccaattctcatt-aaaaaattacaagacacgcaaagaaacagaaaa--gtgacccagattcaagaaaacaaacagtaactagaaacagact i rheMac3.chr10 C 0 I 11 s macFas5.chr10 81047104 1243 - 96509753 CATGGTGAACAGTTTCTGGTATAAATGAAGAATGTAAGTCTTAACtatatatataatgtaaatatatatatatttacatTAAGGAACAGAACTTGCCCTTAATCACTGTCATTAGAAATATACAACTGGAG-ATCTGAAACAACTGAAAATAGTAGCAATAAAGGAAAAAAG--ATAAATAGAAATGGGCAATGATGAGGAGCTATGTAGTAAGTAATTATA----AAATGCCATGCAATGATTCAGGGAAgagacttctggctatgatggcatgaacaggtcagtgaattgtttcctt--------acgacag-taagaaagttggac-aaagttgtcaaaaacagctatttaaggattccagaaatcaatcaaaggcatacagacaataaatagagagatgtcctgagaaattgcttaaacttaggggtaagaccaTCCAGA--------------------------------CACAAACTTA------------ATGCCTT------------------AAAACTtag-tgttatcaggggagggctgggaccat-aaaaccagcaattttcactgccagagagggcagatctgactttggacaa-gggg-------agattgaaggactggtagaaaatccatagctctgtcagctgaaagaggccaacctggtgggaacctaacagggagaagacattcttctagcttgaggctgt-ggtctgatgagggtgcagtggaagaccagctagaaatctgaaggggagatcctggaaagaaacgagtcataaaagggtcagatttgctctcctcacaaccctgggtggctgtgaaactacatggatgaggaagggagacatgggaggtctcaatagaaagaaaacccaaggcaggcttgagaactggctgagctttgagtgcacttcccaatccacctggatcattagaaggt-gaaagctcaacaagcttcaggtg---tttgagcaccaactctgcactagtcacaggctaaccat---------taagctagggagacacggg--tgcctcctagccaggctaaaaacagt-----aacaaatgaaaatcactaaga--------agaaacattagtggccacacactgtgtgggagacaaattccatagtttaagtatgggcaaattacttaaaacacacacacacacaaacacaa--------acacacacatat-gcccatctcagaaaaataagtaa-----cacctcacagtcactacagtacattactaaaatgtccaattctcatt-aaaaaattacaagacacgcaaagaaacagaaaa--gtgacccagattcaagaaaacaaacagtaactagaaacagact i macFas5.chr10 C 0 I 6 s papAnu2.chr10 76304841 1243 + 90941950 CATGGTGAACAGTTTCTGGTATAAATGAAGAATGTAAgttttaactatatatataatgtaaaaatatatatatttacattaaggAACAGAACTTGCCCTTAATCACTGTCATTAGAAATATACAACTGGAG-ATCTGAAACAACTGAAAATAGTagcaataaaggaaaaaag--ataaacagaaatggGCAATGATGAGGAGCTATGTAGTAAGTAATTATA----AAATGCCATGCAATGATTCAGGGAAGAGACTTCTGGCTATGATGGCATGAACAGGTCAGTGAATTGTTTCCTT--------ACGACAG-TAAGAAAGTTGGAC-AAAGTTGTCAAAAACAGCTATTTAAGGATTCCAGAAATCAATCAAAGGCATACAGACAATAAATAGAGAGATGTCCTGAGAAATTGCTTAAACTTAGGGGTAAGACCATCCAGA--------------------------------CACAAACTTA------------ATGCCTT------------------AAAACTTAG-TGTTATCAGGGGAGGGCTGGGTCCAT-AAAACCAGCAATTTTCACTGCCAGAGAGGGCTGATCTGACTTGGGACAA-GGGG-------AGATTGAAGGACTGGTAGAAAATCCATAGCTCTGTCAGCTGAAAGAGGCCAACCTGGTGGGAACCTAACAGGGAGAAGACATTCTTCTAGCTTGAGGCTGT-GGTCTGATGAGGGTGCAGTGGAAGACCAGCTAGAAATCTGAAGGGGAGATCCTGGAAAGAAACGAGTCATAAAAGGGTCAGATTTGCTCTCCTCACAACCCTGGGTGGCTGTGAAACTACATGGATGAGGAAGGGAGACATGGGAGGTCTCAATAGAAAGAAAACCCAAGGCAGGCTTGAGAACTGGCTGAGCTTTGAGTGCACTTCCCAATCCACCTGGATCATCAGAAGGT-GAAAGCTCAACAAGCTTCAGGTG---TTTGAGCACCAACTCTGCATTAGTCACAGGCTAACCAT---------TAAGCTAGGGAGACACAGG--TGCTTCCTAGCCAGgctaaaaacagt-----aacaaatgaaAATCACTAAGA--------AGAAACATTAGTGGCCACACACTGTGTGGGAGACAAATTCCATAGTTTAAGtatgggcaaattacttaaaacacacacacacacaaacacaa--------acacacacatat-gcccatctcagaaaaataagtaA-----CACCTCACAGTCACTACAGTACATTACTAAAATGTCCAATtctcatt-aaaaaattacaagacacgcaaagaaacagaaaa--gtgacCCAGATtcaagaaaacaaacagtaaCTAGAAACAGACT i papAnu2.chr10 C 0 I 6 s chlSab2.chr19 18573327 1240 + 33263144 CATGGTGAACAGTTTCTGGTATAAATGAAGAATGTAAGTCTTAACtatatatataatgtaaaaaaatatatatttacatTAAGGAACAGAA-TTGCCCTTAATCACTGTCATTAGAAATATACAACTGGAG-ATCTGAAACAACTGAAAATAGTAGCAATAAAGGAAAAAAG--AGAAATAGAAATGGGCAATGATGAGGAGCTATGTAGTAAGAAACTACA----AAATGCCATGCAATGATTCAGGGAAgagacttctgactatgacggcatgaacaggtcagtgaattgtttcctt--------acgacag-taagaaagttggac-aaagttgtcaaaaacagctatttaaggattacagaaatcaatcaaaggcatacagacaataaatagagagatgtcctgagaaattgcttaaacttaggggtaagaccaTCCAGA--------------------------------CACAAACTTA------------ATGCCTT------------------AAAACTtag-tgttatcaggggagggctgggaccat-aaaaccagtaaatttcactgccagagagggcagatctgacttgggacaa-gggg-------agattgaaggactggtagaaaatccatagctctgtcagctgaaagggaccaacctggtgggaacctaacagggagaagacattcttctagcttgaggctgt-ggtctgatgagggtgcagtggaagaccagctagaaatctgaaggggagatcctggaaagaaacgagtcataagagggtcagatttgctctcctcacaaccctgggtggctgtgaaactacatggatgaggaagggagacatgggaggtctcaatagaaagaaaacccaaggcaggcttgagaactggctgagctttgagtgcacttcccaatccacctggatcatcagaaggt-gaaagttcaacaagcttcaggtg---tttgagcaccaactctgcactagtcacaagctaaccat---------taagctagggagacacggg--tgcctcctagccaggctaaaaacagt-----aacaaatgaaaatcactaaga--------agaaacattagtggccacacactgtgtgggagataaattccatagtttaagtatgggc---ttacttaaaacacacacacacacaaacacaa--------acacacacatatggcccatctcagaaaaataagtaa-----cacctcacagtcactacagtacattactaaaatgtccaattctcatt-aaaaaattataagacacacaaagaaacagaaaa--gtgacccagattcaagaaaacaaacagtaactagaaacagact i chlSab2.chr19 C 0 I 11 s calJac3.chr1 198274966 1202 + 210400635 CATGGTGAACAGTTTCAGGTATAAATGAGGAACATAAGTCTTAACTACATATAC------------------CTTACATTAAGGAACAGAGCTTGCTCTTAATCACTGTCATTAGAAATACACAATTGGAG-AGCTGAAACAAATGGAAATAGTAGCAATAAAGGA----------AAACAGAAATGGGCAATGATGAGGAGACATGTAGTAAGTAATTACA----AAATGCCATGCAATGATTCAGGGAAGAGACTTCTGGCTATGATGGCAAGAACAGATCAATGAATTGTTTCCTCAAAAGAAAATGACAGTTAAGAAAGTTGGAC-GAAGTTGTCAAAAACAGTTA-TTCAAGATTCTGAAAATCAATCCAAGGCAGACAGACAATAAATAGTGGAATGTCCTGAGAAATTGCTTAAGCTTAGGGGCAAGA-CATCTGGA--------------------------------CACAAACTTA------------ATGCCTT------------------AAAACTTAG-TTTTATCAGGGGAAAGCTGGGACCTT----ACTAGCAATTTTCACTGCCAGAGAGGGCAGACCTGACTTGGGACAAGCAGG-------AGATTGAAGGAGGAGTAGAAAATCCACAGCTTTGTCAGCTAACAGGGGCCAACCTGGTGGGAACCTAACTGGGAGAAGACGTTCTTCCAGCTTGAGGTTGT-GGTCTGATTAGGGTGTAGTGGAAGCCCAGCTGGAAATCTGAAGGGGAGATCCTGGAAAGAAAAGAGTCATAAAAGGGCCAGATATGCTCACCTCACATCCCTGGGTGGTTGTGAAACTACATGAATGAGGAAGGAAGACATGAGTGGTCTCAACAGAAAGAAAACCCAAGGCAGGCTGGAGAACTGGCTGAGCTTAGAGTGCACTTCCCAATCCACCTGGATCATCAGAGGGT-GAAAGCTCTACAAGCT----------TTTGGGCACAACCCCTACACTAGTCACAGGCTAATCATCACTAATCACAAGCTAGGAAGACATAAG--TGACTCCTAGCCAGGCTAAAAA-AATAAAGTAACAAATGAAAATCActaagc--------agaaacatcagtggccacacactgtgtgggagtcagattccatagtttaagtatgggcaagttacttaaaac----------------------------acacatacagac--------tcagaaaaatcagtaa-----caccccacagtcactacaatacattactaagatgtccaactttcattaaaaaaattacaagacttgcagagaaagagaaaa--gtgacccagatttaagaaaacaagcagttactagaaacagact i calJac3.chr1 C 0 C 0 s canFam3.chr10 40893105 1276 - 69331447 TGTAGTGAATAGTTTCTAATAGGGATGAAGAATATAAGTCTTCACCATATATA-------------------TTTATGTTAAGGAAGAGAACTTGCCCTTCA-CACTACCATTAAAAACCTAGAATTTGGGCATCTGAAATAATGGAAGATGGTGGCAGGAAGAGAAAACAAGCAGAAAGAGAAATGGGCCATGGGGAAGAGAGGTATGGTGAGGAACTGTACAGTAAGCGCTACATCAAGAGTCAGggagggcactgctggctctaacagtgtgaatgggcctgtaacccctttccccaaaacaagaccacag-taagaaagccggacaaaaactgcc--tgacagtcatttcacg-ttctggaaatcaatcaa---cata--------------agaaatttcttgaaaaattgctagagctta-aggtaagaccagcaagaggccacatacattgccagtagctgctccaacccaccacctcatccctgcccaacatcccttccctcagttctgtgggagagaacttagtttttaccaggacagggtcagggccatgaaaactagtagctgt-gctaccagaaggggtaaactcaatttggagcactggggcagtggtggagtgaagga---gtagaaaactcacagtcctgttgaccaaaagtggcaaatctggtagg-ccctaatgggaaatata-gttcttctttcttgatcttgtgggtctgactgaggtg-agtggtggagcagccagcaacatgaaggggagatcctggaaatgagagagtcacggaggagctagctatgctctcctcacatctgtggctgactatgaaaatacaagcatgaggaagggagacatgagagagcccaacagagagataaagccaagtggacctgagacccggctaaactctgaacttacttccaaacccac---aaacacaagagggtgggaagctttacaagcttgaggtgctttttaaacacaacttccgcccaaatcactggctgaccac---------ggagctagtgtgacacagggataacacctagccaggctaaaga--gtaaaaaggagagggaaaatcgctaagattttgtatagaaacagcagtggctgcacac-----------cacattccacagtttaagctcaagcaaattacttaaaacatac------------------------aaacacacacca-acactgctcaaaaaaacaaacaaaaaaccacttcagagttgctgaaatgtattacaaaaatgtccagttt--att-aaaaagttacaagacctgtaaagaaacaggagagtgtgacccagactcaagaaaacaaacagtaactagaaatagact i canFam3.chr10 I 199 C 0 e mm10.chr15 77127845 2759 + 104043685 I a score=-402.000000 s hg38.chr22_KI270876v1_alt 124324 3 + 263666 -aag--- s panTro4.chr22 34502291 3 + 49737984 -aag--- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30918321 3 + 46535552 -aag--- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100469420 3 - 115148730 -aat--- i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81048353 3 - 96509753 -tag--- i macFas5.chr10 I 6 I 2 s papAnu2.chr10 76306090 3 + 90941950 -TAG--- i papAnu2.chr10 I 6 I 2 s calJac3.chr1 198276168 3 + 210400635 -aag--- i calJac3.chr1 C 0 C 0 s canFam3.chr10 40894381 7 - 69331447 cgagtgg i canFam3.chr10 C 0 C 0 e mm10.chr15 77127845 2759 + 104043685 I e rheMac3.chr10 80621742 11 + 95678458 I e chlSab2.chr19 18574567 11 + 33263144 I a score=181117.000000 s hg38.chr22_KI270876v1_alt 124327 53 + 263666 gcccagatgttggatttagcagacaacgttaaagcagtaaatacaaatatatt s panTro4.chr22 34502294 53 + 49737984 gcccagatgttgggtttagcagacaacgttaaagcagtaaatacaaatatatt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30918324 47 + 46535552 gcccagatgttggatttagcagacaacattaaagcagtaaatac------att i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100469423 53 - 115148730 gcccagatgttggatttagcagacaacgttaaagcagtaaatacaaatatatt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80621753 53 + 95678458 gcccagatgttggatttagcagacaactttaaagcagtaaatacaaatatatt i rheMac3.chr10 I 11 C 0 s macFas5.chr10 81048358 53 - 96509753 gcccagatgttggatttagcagacaactttaaagcagtaaatacaaatatatt i macFas5.chr10 I 2 C 0 s papAnu2.chr10 76306095 53 + 90941950 GCCCAGATGTTGGATTTAGCAGACAACTTTAAAGcagtaaatacaaatatatt i papAnu2.chr10 I 2 C 0 s chlSab2.chr19 18574578 53 + 33263144 gcccagatgttggatttagtagacaactttaaagcagtaaatacaaatatatt i chlSab2.chr19 I 11 C 0 s calJac3.chr1 198276171 53 + 210400635 gcctggatactgcatttagcagacaacttcaaaacagtaaatacaaatatact i calJac3.chr1 C 0 C 0 s canFam3.chr10 40894388 53 - 69331447 gcctggatgttggattcagcaggtgacgtcaaaatagcaattacacatgtatt i canFam3.chr10 C 0 C 0 e mm10.chr15 77127845 2759 + 104043685 I a score=660830.000000 s hg38.chr22_KI270876v1_alt 124380 234 + 263666 tttaaaattaaggctgggcatggtgtctcacacctgtaatcccagcatgttaggcagctgaggcgagagaactccttgagcccaggagttcaagactagcctgggtaacatagcgagaccctgcctctacaaaaaaatacaaaaattagctgggtttggttgcatgtgcctgtagtaccagctactcaggaggctgaggcaggaagatcacttgcgcccagcaggtcaaggctg s panTro4.chr22 34502347 234 + 49737984 tttaaaattaaggctgggcatggtgtctcacacctgtaatcccagcatgttaggcagctgaggcgagagaactccttgagcccaggagttcaagactagcctgggtaacatagcgagaccctgcctctacaaaaaaatacaaaaattagctgggtttggttgcatgtgcctgtagtaccagctactcaggaggctgaggcaggaagatcacttgcgcccaggaggtcaaggctg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30918371 234 + 46535552 tttaaaattaaggctgggcacggtgtcttacacctgtaatcccagcatattaggcggctgaagcgagagaactgcttgagcccaggagttcaagactagcctgggcaacatagcaagaccctgtctctacaaaaaaatacaaaaattagctgggtttggttgcatgtgcctgtagtaccagctactcacgaggctgaggcaggaagatcacttgcgcccaggaggtcaaggctg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100469476 234 - 115148730 tttaaaattaaggctgggcacggtgtctcacacccgtaatcccagcatgttaggtggctgaggtgagagaactgcttgagtccaggagttcaagactagcctgggcaacacagcaagaccctgtctctacaaaaaaatacaaaaattagctgggtttggttgcatgtgcctgtagtaccagttactcaggaggctgaggcaggaagatcacttgcacccaggaggtcaaggctg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80621806 233 + 95678458 tttaaaattaaggctggacattgtatctcacacctgtattcccagaatgctgggaggctgaggcaagagaactgcttgagcccaggagttcaagatcagcctgggcaacatagtgagaccctgtctctac-aaaaaacacaaaagttagctggggttggttgcatgtgcctgtagtgccagctactcaggtggctgaggcaggaggattacttgcacccaggaggtcaaggctg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81048411 233 - 96509753 tttaaaattaaggctggacattgtatctcacacctgtattcccagaatgctgggaggctgaggcaagagaactgcttgagcccaggagttcaagatcagcctgggcaacatagtgagaccctgtctctac-aaaaaacacaaaagttagctggggttggttgcatgtgcctgtagtgccagctactcaggaggctgaggcaggaggattacttgcacccaggaggtcaaggctg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76306148 233 + 90941950 tttaaaattaaggctgGACATTGtatctcacacctgtattcccagcatgctgggaggctgaggcaagagaactgcttgagcccaggagttcaagatcagcctgggcaacatagtgagaccctgtctctac-aaaaaacacaaaagttagctggggttggttgcatgtgcctgtagtgccagctactcaggaggctgaggcaggaggattacttgcacccaggaggtcaaggctg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18574631 210 + 33263144 tttaaaattaaggctggacattgtatctcacacctgtattcccagcatgctgggaggctgaggcaagaaaactgcttgagcccaggagttcaagaccagcctgggcaacatagtaagaccctgtctctac-aaaaaacacaaaaattagctggggttggttgcatgtgcctgtagtgccagctactcaggaggctgaggcaggaggattac----------------------- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198276224 231 + 210400635 tttaaaattaaggtggggcatggtggttcacacctgtaatcccagcactttgggaggctgaggcaagagaactgcttgagcccaggagttcaagaccagcctgagtaacatagtgagaccctgtctctac-aaaaaatacaaaagttagct-ggtatggttgcacgtgcctgtagtaccagctactcaggaggctgaggtgggaggatcacttgtg-ccaggaggtcaaagctg i calJac3.chr1 C 0 C 0 e mm10.chr15 77127845 2759 + 104043685 I e canFam3.chr10 40894441 0 - 69331447 C a score=852535.000000 s hg38.chr22_KI270876v1_alt 124614 271 + 263666 cagtgagctgtgattacacctctgcactccagcctgggtgacaaagtgagaccctatctcaaaaaataat---aataaaaattaaagaaa--aatatgagaagaaatctcagtagaaaaatgt-------aaatggaaattccagagttgaaaagtataataactgaaag--aaaaaaaatcactagatgggctcaacagcagatttgggatggcagaacaaagaaggagtgaactgaaaaagagaccaccagaaattatccaatctaaagaacagaaggaaaaa s panTro4.chr22 34502581 273 + 49737984 cagtgagctgtgattacacctctgcactccagcctgggtgacaaagtgagaccctatctcaaaaaataat---aataaaaattaaagaaa--aatatgagaagaaatctcagtagaaaaatgt-------aaatggaaattccagagttgaaaagtataataactgaaagaaaaaaaaaatcactagatgggctcaacagcagatttgggatggcagaacaaagaaggagtgaactgaaaaagagaccaccagaaattatccaatctaaagaacagaaggaaaaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30918605 273 + 46535552 cagtgagctgtgattacacctctgcactccagcctgggtgacaaagtgagaccctatctcaaaaaataataacaataaaaattaaagaaa--aatatgagaagaaatctcattagaaaaatgt-------aaatggaaattccagagttgaaaagtataataactgaaat---ttaaaaatcactagatgggctcaacagcagatttgggatggcagaacaaagaaggagtgaactgaaaaagagaccaccagaaattattcaatctaaagaacagaaggaaaaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100469710 273 - 115148730 cagtgagctgtgattacacctctgcactccggcctgggtgacaaagtgagaccctatctcaaaaaataataacaataaaaattaaagaaa--aatacgagaagaaatctcagtagaaaaatgt-------aaatggaaattccggagttgaaaagtataataactgaaat---aaaaaaatcactagatgggctcaacagcagatttgggatggcagaacaaagaaggagtgaactgaaaaagagaccaccagaaattatccaatctaaagaacagaaggaaaaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80622039 272 + 95678458 cagtgagctgtgattgcacctctgcactccagcctggatgacaaagtgagatcctatctcaaaaaataac---aataaaaataaacaaaaatattatgagaagaaatctcagtagaaaaatat-------aaatggaaattctagaattgaaaagtataataactgaaat---tttaaaatcactagatgggctcaacagcagatttggaatggcagaacaaagaaggagtgaactgaaaaagagatcaccagaaattatccaatctaaagaacagaaggaaaaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81048644 272 - 96509753 cagtgagctgtgattgcacctctgcactccagcctggatgacaaagtgagatcctatctcaaaaaataac---aataaaaataaacaaaaatattatgagaagaaatctcagtagaaaaatat-------aaatggaaattctagaattgaaaagtataataactgaaat---tttaaaatcactagatgggctcaacagcagatttggaatggcagaacaaagaaggagtgaactgaaaaagagatcaccagaaattatccaatctaaagaacagaaggaaaaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76306381 272 + 90941950 cagtgagctgtgattgcacctctgcactccagcctggatgacaaagtgagatcctatctcaaaaaataac---aataaaaataaacaaaaatattatgagaagaaatctcagtagaaaaatat-------aaatggaaattctagaattgaaaagtataataactgaaat---tttaaaatcactagaTGGGCTCAACAGCAGATTTGGAATGGCAGAACAAAGACGGAGTGAACTgaaaaagagatcaccagaaattatccaatctaaagaacagaaggaaaaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18574841 259 + 33263144 -------------ttgcacctctgcactctagcctggatgacaaagtgagatcctatctcaaaaaataac---aataaaaataaacaaaaatagtatgagaagaaatctcagtagaaaaatat-------aaatggaaattctagagttgaaaagtataataactggaat---tttaaaatcactagatgggctcaacagcagatttggaatggcagaacaaagaaggagtgaactgaaaaagagatcaccagaaattatccaatctaaagaacagaaggaaaaa i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198276455 266 + 210400635 cagtgagctgagattgcaccactgcccttcagcctaggtgacaaagtgagaccctatctcaaaaaaaa-----aacaaaatttaaaaaga----tatgagaagaaatctaagtagaaaaatat-------aaatggaaattccagagttgaaaaatgtaataactgaaat---aaaaaaataactagatgggctgagcagcagatttcaaatggcagaacaaagaaggagtcaactgaaaaagagatcacctgaaattatccaatctaaagaacagaaggaaaaa i calJac3.chr1 C 0 C 0 s canFam3.chr10 40894441 204 - 69331447 -------------------------------------------------------------------------cagagaactgaaagaaa-tatgatgacaaggaatctcaatagagaaacataaatcacaaatgggaattctagagttggaaagtacaatggctgaaat------aaattcactagatgggctcaacagctgatgcaatgtggcagaac-aagagtgagtgaactgaaagagatgttaacagaaattctccaatttagtgaacagaagaaaaaa i canFam3.chr10 C 0 I 385 e mm10.chr15 77127845 2759 + 104043685 I a score=2907676.000000 s hg38.chr22_KI270876v1_alt 124885 957 + 263666 agatccaagaaaaatgaatagaacttcagattttgtttaggttcagactgaatttttttaagaaacaaaaacccctatgggagaacaccaagtattttaatttatgtgttggctgggcgcagtggctcatgcctgtaatcccagcactttgggaggccgaggcaggcagatcatgaggtcaggtgtttgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaatgagctgggcatggtggtgcatgcccataatcccagctacttgggaggctgaggcaggagaattggtcgaacctgggaggcagaggttgtactgagccgagattgcaccactgcactccagcctgggcaacagagcaagacttcatctcgggggaaaagaaaattatgtgtaatcagaggcccaggaagagagaagaaaggaaaaaaaaatttgaagaaattatggtgaaaaacatcccaaatttgatgaatatatatttcaaaatctcaagagaacccaagtatgataaaaacaaagagatccactcctagacacatcatagagaaacggctcaaagccaaagacaaacagaaaatcttgaaatcagcaagagaagaacaactcatcacctacagggggaccaacaccagggttaacagctgacttctcatcacaatcagctgactcccatgggagtggtccatgggatgacatatttaaagggctggggggtggaggaagaaactgtcaaccaagaatcctatagctaacaaaactatcattcaaaactgaacacataaaaaaacaacattcccagataaacaaaaacag--tatttgtttccagcaggc-----ct-aaaaaaaaatactaaaagaagtcctttggactgaaaggaaatgacactgcataataacttggacctataggaagacatgaagatcactaaaaatagtc-aaaaaa s panTro4.chr22 34502854 962 + 49737984 agatccaagaaaaatgaatagaacttcagattttgtttaggttcagactgaatttttttaagaaacaaaaacccctatgggagaacaccaagtattttaatttatgtgttggctgggtgcagtggctcatgcctgtaatcccagcactttgggaggctgaggcaggcagatcatgaggtcaggtgtttgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattaactgggcatggtggcgcatgcccataatcccagctacttgggaggctgaggcaggagaattggtcgaacctgggaggcagaggttgtagtgagctgagattgcaccactgcactccagcctgggcaacagagcaagacttcatctcgggggaaaagaaaattatgtgtaatcagaggcccaggaagaaagaagaaaggaaaaaaaaatttgaagaaattatggtgaaaaa-atcccaaatttgatgaatatatatttcaaaatctcaagagaacccaagtatgataaaaacaaagagatccactcctagacacatcatagagaaacggctcaaagccaaagacaaacagaaaatcttgaaatcagcaagagaagaacaactcatcacctacagagggaccaacaccagggttaacagctgacttctcatcacaatcagctgactcccataggagtggtccatgggatgacatatttaaagggctggggggtggaggaagaaactgtcaaccaagaattctatagcgaacaaaactatcactcaaaactgaacacacaaaaaaacaacattcccagataaacaaaaacag--tatttgtttccagcaggcctactct-aaaacaaaatactaaaagaagtcctttgaactgaaaggaaatgacactggataataacttgtacctataggaagacatgaagatcactaaaaatagtcaaAAAAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30918878 959 + 46535552 agatccaagaaaaatgaatagaacttcagattctgttcaggttcagactgaatttttttaagaaacaaaaacccctatgggagaacaccaagtattttaatttatgtgttggctgggcgcagtggctcatgcctgtaatcccagcactttgggaggccgaggcaggcagatcatgaggtcaagagtttgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaatgagccgggcgtggtggcgcatgcccataatcccagctacttgggaggctgaggcaggagaattggtcgaacctgggaggcagaggttgtagtgagccgagactgcaccactgcactccagcctgggcgacagagcaagacctcatctcagggggaaaaaaaattatgtgtaatgagaggcccaggaagagagaagaaaggaaaaaaaaatttgaagaaattatggtgaaaaacattccaaatttgatgaatatatatttcaaaatctcaagagaacccaagtatgataaaaacaaagagatccactcctagacacatcatagagaaatggctcaaagccaaagacaaacagaaaatcttgaaatcggcaagagaagaacaactcatcacctacagggggaccaacaccaggattaacagctgacttctcatcagaatcagctgactcccatgggagtggtccatgggatgacatatttaaagggctggggggtggaggaagaaactgtcaaccaagaattctatagctaacaaaactatcattcaaaactgaacacacaaaaa---aacattcccagataaacaaaaacaa--tatttgtttccagcaggcctactct-taaa-aaaacactaaaacaagtcctttggactgaaaggaaataacactggataataacttggacctacaggaagacatgaagatcattaaaaatggtcaaAAAAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100469983 961 - 115148730 agatccaagaaaagtgaatagaacttcagattctgtttaggttcagactgaatttttttaagaaacaaaaacccctatgggagaacaccaagtattttaatttatgtgttggctaggcgcagtggctcatgcctgtaatcccagcactttgggaggccgaggcaggcagatcatgaggtcaggagtttgagaccggcctggccaacatggtgaaaccccatctctactaaaaatacaaaaatgagctgggcgtggtggcacatgcccgtaatcccagctacttgggaggctaaggcaggagaattggtcgaacctgggaggcagaggttgtagtgagccgagattgcaccactgcactccagcctgggcgacagagcaagacttcatctcgggggaaaaaaaaactatgtgtaatgagaggcacaggaagagagaagaaagg-aaaaaaaatttgaagaaattatggtaaaaaacatcccaaatttgatgaatatatatttcaaaatctcaagagaacccaagtatgataaaaacaaagagatccactcctagacacatcatagagaaatggctcaaagccaaagacaaacagaaaatcttgaaatcagcaagagaagaacaactcatcacctacagggggaccaacaccaggattaacagctgacttctcatcagaatcagctgactcccatgggagtggtccatgggatgacatatttaaagggctggggggtggaggaagaaactgtcaaccaggaattctatagctaacaaaactatcattcaaaactgaacacataataaaacaacattcccagataaacaaaaacag--tatttgtttccagcaggcctactct-aaaa-aaaataccaaaagaagtcctttggactgaaaggaaatgacactggataataacctggacctacaggaagacgtgaagattactaaaaatggtcaaAAAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80622311 962 + 95678458 agatccaagaaaaatgaatagaacttccgattctgtttaggttcggattgaatttttttaagaaacaaaaaaccctatgggagaacaccaagtgtttcaatttatgtgttggctgggcgcaggggctcatgcctgtaatcccagcactttgggaggccaaggcaggcagatcatgaggtcgggagttggagaccagtatggccaacatggtgaaactccatctctactaaaaatacagaactgagctgggcttggtggtgcaggcccataatcccagctacttgggaggctgaggcaggagaattgcttgaacctgggaggcagaggttgcagtgagccgagatcacaccactgcactccagcctgggcgacagagcaagacttcatctcggggggaaaaaaaattatgtgtaatgagaggctcaggaagagagaagaaaggaaaaagaattttgaagaaattatggtgaaaaaaatcccaaatttgatgaatatgtattccaaaatctcaagagaacccaagtatgataaccacaaagagatctactcctagacacatcatagagaaactgctcaaagccaaagacaaacagaaaatcttgaaatcagtaagacaagaacaactcatcacctacagggggaccaacaccaggattaacagctgacttctcatcagaatcagctgactcccatgggagtggttcatgggatgacatatttaaagggctggggggtggaggaagaaactgtcaaccaagaattccatagctaacaaaactatcattcaaaactgaaaacacaaaaaaacaacattcccatataaacaaaaacag--tatttgtttccagcaggcctactct-aaaa-aaaatactaaaagaagtcctttggactgaaaggaaatgacactggataataacttggacctataggaagacacaaagatcactgaaaatggtcaaAAAAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81048916 962 - 96509753 agatccaagaaaaatgaatagaacttccgaTTCTGTTTAGGTTCGGATTGAATTTTTTTAAGAAACAAAAAACcctatgggagaacaccaagtatttcaatttatgtgttggctgggcgcaggggctcatgcctgtaatcccagcactttgggaggccaaggcaggcagataatgaggtcgggagttggagaccagtatggccaacatggtgaaactccatctctactaaaaatacaaaactgagctgggcttggtggtgcaggcccataatcccagctacttgggaggctgaggcaggagaattgcttgaacctgggaggcagaggttgcagtgagccgagatcacaccactgcactccagcctgggcgacagagcaagacttcatctcggggggaaaaaaaattatgtgtaatgagaggctcaggaagagagaagaaaggaaaaagaattttgaagaaattatggtgaaaaaaatcccaaatttgatgaatatgtattccaaaatctcaagagaacccaagtatgataaccacaaagagatctactcctagacacatcatagagaaactgctcaaagccaaagacaaacagaaaatcttgaaatcagtaagacaagaacaactcatcacctacagggggaccaacaccaggattaacagctgacttctcatcagaatcagctgactcccatgggagtggttcatgggatgacatatttaaagggctggggggtggaggaagaaactgtcaaccaagaattccatagctaacaaaactatcattcaaaactgaaaacacaaaaaaacaacattcccatataaacaaaaacag--tatttgtttccagcaggcctactct-aaaa-aaaatactaaaagaagtcctttggactgaaaggaaatgacactggataataacttggacctataggaagacacaaagatcactgaaaatggtcaaAAAAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76306653 961 + 90941950 agatccaagaaaaatgaatagaactTCCGATTCTGTTTAGGTTCggattgaatttttttaagaaacagaaaaccctATGGGAGAACACCAAGTGTTTCAATTTATgtgttggctgggcgcaggggctcatgcctgtaatcccagcactttgggaggccaaggcaggcagataatgaggtcgggagttggagaccagtgtggccaacatggtgaaactccatctctactaaaaatacaaaactgagctgggcttggtggtgcaggcccataatcccagctacttgggaggctgaggcaggagaattgcttgaacctgggaggcagaggttgcagtgagccgagatcacaccactgcacttcagcctgggcgacagagcaagacttcatctcgggggg-aaaaaaattatgtgtaaTGAGAGGctcaggaagagagaagaaaggaaaaagaattttgaagaaattatggtgaaaaaaatcccaaatttgATGAATATGTATTCCAAAATCTCAAGAGAACCCAAGTATGATAACCACAAAGAGATCTACTCCTAGACACATCATAGAGAAACTGCTCAAAgccaaagacaaacagaaaatcttGAAATCAGCAAGACAAGAACAACTCATCACCTACAGGGGGACCAACACCAGGattaacagctgacttctcatcagaatcAGCTGACTCCCATGGGAGTGGTTCATGGGATGACATATTTAAAGGGCTGGGGGGTGGAGGAAgaaactgtcaaccaagaattccaTAGCTaacaaaactatcattcaaaactgaaaacacaaaaaaacaacattcccatataaacaaaaacag--tatgtGTTTCCAGCAGGCCTactct-aaaa-aaaatactaaaagaagtCCTTTGGACTGAAAGGAAATGACACTGGATAATAACTTGGACCTATAGGAAGACACAAAGATCACTGAAAATggtcaaaaaaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18575100 962 + 33263144 agattcaagaaacatgaatagaacttcagaTTCTGTTTAGGTTCGGATTGAATTTTTTTAAGAAACAAAAAACcctatgggagaacaccaagtgtttcaatttatgtgttggctgggcgcaggggctcatgcctgtaatcccagcactttgggaggccgaggcaggcagataatgaggtcgggagttggagaccagtgtggccaacatggtgaaactccatctctactaaaaatacaaaactgagctgggcttggtggtgcaggcccataatcccagctacttgggaggctgaggcaggagaattgcttgaacctgggaggcagaggttgcagtgagccgagatcacaccactgcgctccagcctgggcgacagagcaagacttcatctcggggggaaaaaaaattatgtgtaatgagaggctcaggaagagagaagaaaggagaaagaattttgaagaaattatggtgaaaaaaattccaaatttgatgaatatgtattccaaaatctcaagagaacccaagtatgataaccacaaagagatctactcctagacacatcatagagaaaccgctcaaagccaaagacaaacagaaaatcttgagatcagcaagacaagaacaactcatcacctacagggggaccaacaccaggattaacagctgacttctcatcagaatcagctaactcccatgggagtggttcatgggatgacatatttaaagggct-gggggtggaggaagaaactgtcaaccaagaattctatagctaacaaaactatcattcaaaactgaacacacaaaaaaacaacattcccatataaacaaaaacag--tatttgtttccagcaggcctactctaaaaa-aaaatactaaaagaagtcctttggactgaaaggaaatgacactggataataacttagacctataggaagacacaaagatcactgaaaatggtcaaAAAAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198276721 958 + 210400635 agatcaaagaaaaatgaatagaacttcagattatgtttaggttcagattgaattttttaaagaaacaaaaaaccctatgggagaacaccaagtgtttcagtttatgtgttagctaggcacagtggctcacacctgtaataccagcactttgggaggtcaaggcaggcaaatcatgagatcaggagtttgagaccaacctggccaacatggtgaaaccccatctctgctaaaaatataaaaatgagccaagtgtggtggcacatgcctgtaatcccagctacttgagaagctgaggcaggagaattgcttgaacctgggaggcagaggttgcagtgagccgagattgtaccactgcactccagcctggacaacagagcaagactttgtcttgggggaaaaaaaatttatgtgtaatgagaggaccaagaaaagagaagaaaggaaaaaatatat---atgaagtatagtcaaaaacatcccaaatttgatgaatacagatttcaaaatctcaagaaaacccaagtatgataaaaacaaagagatccactcctagacacatcatagagaaactgcttaaagccaaagacaaacagaaaatcttgaaatcagcaagagaaaaacaactcattacctacaggaggactaacaataggattaacagctgacttctcattagaatgagctgactcccatgcgagtggtccaggggatgacatatttaaagga-tggggtatggaggaagaaactgtcaaccaagaattctatagctaacaaaactatcattcaaaactgaacacacaaaaaaacaacattcccatataaacaaaaacggactatttgtttccagctggtctactct-aaag-aaaatactaaaagaagtcctttggactgaaagcaaatgacactggataacaacttggacctata-gaagatatgaagatcactgaaaatggtgaaAAAA- i calJac3.chr1 C 0 C 0 e mm10.chr15 77127845 2759 + 104043685 I e canFam3.chr10 40894645 385 - 69331447 I a score=342513.000000 s hg38.chr22_KI270876v1_alt 125842 146 + 263666 taaaaTAAAATGAATCCtgtcaagaaactgaaaaaagccacagactgggagaaaatacttggaaaagacttatctgataacggactgttatccaaaatatacaaagaattctaaaatctaataataagaaaacaaacaacctgatt s panTro4.chr22 34503816 146 + 49737984 TAAAATAAAATGAATCCtgtcaagaaactgaaaaaagccacagactgggagaaaatacttggaaaagacttatctgataatggactgttatccaaaatatacaaagaattctaaaacctaacaataagaaaacaaacaacctgatt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30919837 142 + 46535552 C---ATAAAATGAATCC-gtcaagaaactgaaaaaagccacagactgggagaaaatacttggaaaagacttatctgataacggactgttatccaaaatatacaaagaattctaaaacctaacaataagaaaacaaacaacctgatg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100470944 143 - 115148730 C---ATAAAATGAATCCtgtcaagaaactgaaaaaagccacagactgggagaaaatacttggaaaagacttatctgataacagactgttatccaaaatatacaaagaactctaaaacctaacaataagaaaacaaacaacctgatt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80623273 143 + 95678458 C---ATAAAATGAATCCCgtcaagaaactgaaaaaagccacagactgggagaaaatacttggaaaagacttacccaatatcagactgttatccaaaatatacaaagaattctaaaacgtaacaataagaaaacaaacaacctgatt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81049878 143 - 96509753 C---ATAAAATGAATCCCgtcaagaaactgaaaaaagccacagactgggagaaaatacttggaaaagacttacccaatatcagactgttatccaaaatatacaaagaattctaaaacgtaacaataagaaaacaaacaacctgatt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76307614 143 + 90941950 c---ataaaatgaatcccgtcaagaaactgaaaaaagccacagactgggagaaaatacttggaAAAGACTTACCCAATATcagactgttatccaaaatatacaaagaattctaaaacgtaacaataagaaaacaaacaacctgatt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18576062 143 + 33263144 C---ATAAAATGAaccctgtcaagaaactgaaaaaagccacagactgggagaaaatacttggaaaagacttacccaatatcagactgttatccaaaatatacaaagaattctaaaacgtaacaataagaaaacaaacaacctgatt i chlSab2.chr19 C 0 C 0 e mm10.chr15 77127845 2759 + 104043685 I e canFam3.chr10 40894645 385 - 69331447 I e calJac3.chr1 198277679 0 + 210400635 C a score=3970.000000 s hg38.chr22_KI270876v1_alt 125988 16 + 263666 aaaaagtaagacaaag s rheMac3.chr10 80623416 16 + 95678458 aaaaaataggacaaag i rheMac3.chr10 C 0 I 1958 s chlSab2.chr19 18576205 16 + 33263144 aaaaaataggacaaag i chlSab2.chr19 C 0 I 1986 e mm10.chr15 77127845 2759 + 104043685 I e canFam3.chr10 40894645 385 - 69331447 I e calJac3.chr1 198277679 0 + 210400635 C e ponAbe2.chr22 30919979 0 + 46535552 C e panTro4.chr22 34503962 0 + 49737984 C e papAnu2.chr10 76307757 0 + 90941950 C e macFas5.chr10 81050021 0 - 96509753 C e nomLeu3.chr7b 100471087 0 - 115148730 C a score=0.000000 s hg38.chr22_KI270876v1_alt 126004 302 + 263666 gctgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacgaggtcaggagatcgagaccatcctggctaacacagtgaaaccccgtctctactaaaaaaaacacaaaaaattagccgggcgtggtggcgggcacctgtagtcccagctatgcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgggcgacagagcgagactccgtctcaaaaaaaaaaaaaaaaaaa e mm10.chr15 77127845 2759 + 104043685 I e canFam3.chr10 40894645 385 - 69331447 I e calJac3.chr1 198277679 0 + 210400635 C e ponAbe2.chr22 30919979 0 + 46535552 C e rheMac3.chr10 80623432 1958 + 95678458 I e panTro4.chr22 34503962 0 + 49737984 C e papAnu2.chr10 76307757 0 + 90941950 C e macFas5.chr10 81050021 0 - 96509753 C e chlSab2.chr19 18576221 1986 + 33263144 I e nomLeu3.chr7b 100471087 0 - 115148730 C a score=2467968.000000 s hg38.chr22_KI270876v1_alt 126306 2049 + 263666 aaaaagtaagacaaagaccttaccagatacctcaccaaataagatataaagatagcaaataaccacatggaaggatattccatgtcatatgtcatcagggaaatgcaaactaaaacaacaatgagatacaactacatatctattagaatggccaaaatccagacaccaaatgctggcgaggatgtggagcagcaggaactctcattcattgctggtggaaatgcaaaacggtagagccactctggaatgtagtttggtggtttcttataaaattaaacatactcttatcatatgatccagcaatcatggcccttggtatttaccccaagaagttcaaaactaagtccacaaaaaaccctgcatatgaatgtttacagtagctttattcataactgccaaaatctggaagcaaccaagatgcccttaaattggtcaatggataaacaaactgtggtacatacagaccaatgggttattattcagtgctgaaaaagaaatgaactattaggacttgaaaagacacagaggaaacttaaatgcatattactaagtgaaagaagccaatcagaaaaaagctacatactgtgggattacaactacatgaaatcctgaaaaaggaaaaactatgcagatagttaaaagatcagtggttgccaggggttgggttgtggggaggagagagggataaacaagcagaccacagaggatttttaggacagtgaaattactttttgtgatgctataatgctggctatatgctatacatttatccaaacccacagaacgtacaccagtaagagtaaactctaacagactttagg---tgataaagatgtatcaatacaggttcatcaatggtaacaggtgtaccactctggtgtgcaatgttgttagtgggggaggccatgcatgtgtgggaacagaaagtatatgggataagtctgtactatcttctcagtttactgtgaacctaaaactgctctaaaaaaggagatcttaaaaaAAAaa-acaacgtaagattgtttaaagtaataattataatagtgtattgttatatatctaaaatatacaggtataatatgtatgacaatagcacaaaggcgcgtggggaatgaagctatattagacctaagctgctatatttaaccagaataagacacacatgcatgtgcacacacac--aaccattagtaataagttgtgataagtcaaagatgtaattccttgagaaagcactaagaaaatacaagaaacaccagcacaaacaaaaaataactaaag-aaaaaatatcacaaatggatgtaaaaggtacaaaaattatttaacaggaatcagtaaagaaggaacaaaggaacaataaaaggcatgagacagtaaaatgacagacataaatctacctacattaataattacattaagatgcaaattgaccaaatgctccaataaaaagacagaaattttcagactggatgaagaagcaagaagcagg-------atctagctgtgcacttttttcggggagtgggggacggagtctcactctgtgggccaggctggagtgcagtggcatgatctcagttcactgcaacctccgcctccccagttcaagcgattctcctacctcagcct-ctgagtagctgggattacaggcgcacaccaccacgcccggctaatttttgtatttttagtaaggacagggtttcaccatgttggtcaggctggtctgaaactcctgacctcagatgatccagctgcctcggcctcccaaagtgttgggattacaggcgtgagccaccccacctggccc----tttctttttt-aaattttgttaaataagagatatacttcagatacaaagcagttgaaacaaaatgacag-aaaaaaatatgtaaacagt-aactatgagaaggctgaagtgattacattaatatcagacaaatagttttactatttcttggttaactataagccaagaaatagtaaaagagacaaagagggacatttcatattgatgaaaaaaccaatTGGTTAAgaatattttgttggaaagactgtctagtaaa s panTro4.chr22 34503962 2048 + 49737984 aaaaagtaagacaaagaccttaccacatacctcaccaaataagatataaagatagcaaataaccacatggaaggacattccatgtcatatgtcatcagggaaatgcaaagtaaaacaacaatgagatacaactacatatctattagaatggccaaaatccagacaccaaatgctggcgaggatgtggagcagcaggaactctcattcattgctggtggaaatgcaaaacggtagagccactctggaatgtagtttggtggcttcttataaaattaaacatactcttatcatatgatccagcaatcatggcccttggtatttaccccaagaagttcaaaactaagtccacaaaaaaccctgcatatgaatgtttacagtagctttattcataattgccaaaatctggaagcaaccaagatgcccttaagttggtcaatggataaacaaactgtggtacatacagaccaatgggttattattcagtgctgaaaaagaaatgaactattaggacatgaaaagacacagaggaaacttaaatgcatattactaagtgaaagaagccaatcagaaaaaagctacatactgtgggattacaactacatgaaatcctgaaaaaggcaaaactatggagatagttaaaagatcagtggttgccaggggttgggttgtggggaggagagagggataaacaagcagaccacagaggatttttaggacagtgaaattactttttatgatgctataatgctggctatatgctatatatttatccaaacccacagaacgtacaccagtaagagtaaactctaacagactttagg---tgataaagatgtatcaatacaggttcatcaatggtaacaggtgtaccactctggtgtgaaatgttgttagtgggggaggccatgcatgtgtgggaacagaaagtatatgggataagtctgtactatcttctcagtttactgtgaacctaaaactgctctaaaaaaggagatcttaaaaaAAAaa-acaacgtaagattgtttaaagtaataattataatagtgtattgttatatatctaaaatatacaggtataatatgtatgacaatagcacaaaggcgtgtggggaatgaagctatattagacctaagctgctatatttaaccagaataagacacacatgcatgtgcacacacac--aaccattagtaataagttgtgataagtcaaagatgtaattccttgagaaagcactaagaaaatacaagaaacaccagcacaaacaaaaaataactaaag-aaaaaatatcacaaatggatgtaaaaggtacaaaaattatttaacaggaatcagtaaagaaggaacaaaggaacaataaaaggcatgagacagtaaaatgacagacataaatctacctacattaataattacattaagatgcaaattgaccaaatgctccaataaaaagacagaaattttcagactggatgaagaagcaagaagcagg---------ctagctgtgcgcttttttcggggagtgggggacggagtctcactctgtcgcccaggctggagtgcagtggcatgatctcagttcactgcaacctccgcctccccggttcaagcgattctcctacctcagcct-ctgagtagctgggattacaggcgcacaccaccacgcccggctaatttttgtatttttagtaaggacagggtttcaccatgttggtcaggctggtctcaaactcctgacctcagatgatccagccgcctcggcctcccaaagtgttgggattacaggcgtgagccaccccacctggccc----tttctttttt-aaattttgttaaataagagatatacttcagatacaaagcagttgaaacaaaatgacag-aaaaaaatatgtaaacagttaactatgagaaggctgaagtgattacattaatatcagacaaatagttttactatttcttggttaactataagccaagaaatagtaaaagagacaaagagggacatttcatattgatgaaCAAACCAATTGGTTAAgaacattttgttggaaagactgtctagtaaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30919979 2050 + 46535552 aaaaaataggaccaagaccttaccagatacctcaccaaataagatataaagatagcaaataaccacatgaaaggatattccatgtcatatgtcatcagggaaatgcaaactaaaacaacaatgagatacaactacatatctattagaatggccaaaatccagacaccaaatgctggcaaggatgtggagcagcaggaactcttgttcattgctggtggaaatgcaaaatggtagagccactctggaatgtagtttggtggtttcttataaaactaaacatactcttatcatatgatccagcaatcatggcccttggtatttaccccaagaagttcaaaactaagtccacaaaaaatcctgcatgtgaatgtttacaggagctttatttgtaattgccaaaatctggaagcaaccaagatgcccttaagttggtcaatggataaacaaactgtggtacatgcagaccaatgggttattattcagtgctgaaaaagaaatcaactatcaggacatgaaaagacacagaggaaacttaaatgcatattactaagtgaaagaagccaatcagaaaaaagctacatactgtgggattacaactacatgaaattctg-aaaaggcaaaactatggagatagttaaaagatcagtggttgcca------gggttgtggggaggagagagggataaacaagcagaccacagaggatttttaagacagtgaaattactttttatgatgctatagtgctggctatatgctatacatttagccaaacccacagaatgtacaccactaagagtaaactctaacagactttaggtgatgataaagatgtatcaatacaggttcatcaatggtaacaggtgtaccactctggtgtgaaatgttgttagtgggggaggccatgcatgtgtgggagcagaaagtatatgggataagtctgtactatcttctcagtttactgtgaacctaaaactgctctaaaaaaggagatcttaaaaaAAAAACaaaatgtaaggttgtttaaagtaataattataatagtgtattgttatatatctaaaatatacaggtataatatgtatgacaatagcacaaaggagcgtggggaatgaagctatattagacctaagctgctatatttaaccagaataagacacacatgcatgtgcacacacac--aaccattagtaataaattgtgataagtc-aagatgtaattccttgagaaagcactaagaaaatacaagaaacaccagcacaaacaaaaaataactaatgaaaaaaatatcacaaacggatgtaaaaggtacaaaaattatttaacaggaatcagtaaagaaggaacaaaggaacaataaaaggcatgagacagtaaaatgacagacataaatctacctacattaataattacattaagatgcaaattgaccaaatgctccaataaaaagacagaaattttcagactggatgaagaggcaagaagcaag-------atctagctgtatgctttttttggggagtgggggacggagtctcactctgtcacccaggctggagtgcagtggtgcgatctcagttcacggcaacctccgcctccccggttcaagcgattctcctacttcagcctcctgagtagctgggattacaggtgcacaccaccatgtccggctagtttttgta-ttttagtagagacagggtttcaccatgttggtcaggctggtctcaaactcctgacctcagatcatccagccgcctcggcctcccagagtgttgggattacaggcgtgagccaccccgcctggccctttttttttttttt-tttttttgttaaataagagatacacttcagatacaaagcagttgaaacaaaatgacag-aaaaaaatatgtaaacagt-aactatgagaaggctgaagtgattacattaatatcagacaaatagttttactacttcttggttaactataagccaagaaatagtaaaagagacaaagagggacatttcttattgatgaaagaaccaattggttaagaacattttgttggaaagaccatctactaaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100471087 2041 - 115148730 aaaaaataggacaaagaccttaccagatacctcaccaaataagatacaaagatagcaaataaccacatgaaaggatattccatgtcatatgtcatcagggaaatgcaaactaaaacaacaatgagatacaactacatatctattaaaatggccaaaatccagacatcaaatgctggcgaggatgtggagcagcaggaactctcattcattgctggtggaaatacaaaatggtagagccactctggaaagtagtttggtggtttcttataaaactaaacatactcttatcatatgatccagcaatcatggcccttggtatttaccccaagaagttcaaaactaaggccacaaaaaatcctgcatatgaatgtttacagtagctttattcataattgccaaaatctggaagcaaccaagatgcccttaagttggtcaatggataaacaaactgtggtacatacagaccaatgggttattattcagtgctgaaaaagaaatgaactaccaggacatgaaaagacacagaggaaacttaaatgcatattgctaagtgaaagaagccaatcagaaaaaagctacatactgtgggattacaactacatgaaattctgaaaaaggcaaaactatggagatagttaaaagatcagtggttgccaggggttgggttgtggggaggagagagggataaacaagcagaccacagaggatttttaggacagtgaaattagtttttatgatgctataatgctggctatatgctatacatttatccaaacccacagaatgtacaccactaagagtaaactctaacagactttagg---tgataaagatgtatcaatacaggttcatcagtggtaacaggtgtaccactctggtgtgaaatgttgttagtgggggaggccatgcatgtgtgggagcagaaagtatatgggataagtctctactatcttctcagtttactgtgaacctaaaactgccctaaaaaa--AGATCTTAAGAAaaaaa----aagtaagattgtttaaagtaataattataatagtgtattgttatatatctaaaatatacaggtataagatgtatgacaatagcacaaaggagcatggggaatgaagctatattagacctaagctgctatatttaaccaaaataagacacacatgcatgtgcacacacac--aaccatcagtaataagttgtgataagtcaaagatgtaattccttgagaaagcactaagaaaatacaagaaacaccagcacaaacaaaaaataactaatg-aaaaaatatcacaaacggatgtaaaaggtacaagaattatttaacaggaatcagtaaagaaggaacaaaggaacaataaaaggcatgagacagtaaaatgacagacataaatctacctacattaataattacattaagatgcaaattgaccaaatgctccaataaaaagacagaaattttcagactggatgaagaagcaagaagcaag-------atctagctgtatgcttttttcggggagtgggggacggagtctcactctgtcgcccaggctggagtgcagtggcgcgatctcagttcactgcaacctctgcctccccggttcaagtgattctcccacctcagcctcctgagtagctgggataacaggcgcacaccaccacgcccagctaatttttgtatttttagtagagacagggtttcaccatgttggtcaggctggtctcaaactcctgacctcagatgatccagccgcctcagcctcccaaagtgttgggattacaggcgtgagtcaacctgcctggccc----tttttttt-----attttgttaaataagagatacacttcagatacaaagcagttgaaacaaaacgacag-aaaaaaatatgtaaacagt-aactatgagaaggctgaagtggttacattaatatcagacaaatagttttactatttcttggttaactataagccaagaaatagtaaaagagacaaagagggacatttcatattgatgaaagaaccaattggttaagaacattttgttggaaagaccatctactaaa i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81050021 1926 - 96509753 aaaaaataggacaaagaccttaccagatacctcaccaaataagatataaagatagcaaataaccacatgaaagaatgttccatgtcatatgtcatcagggaaatgcaaactaa---aacaatgagatacaactgcatatctattagaatggccaaaatccagacaccaaatgttggcgaggatgtggagcagcaggaactctcattcgttgctggtggaaatgcaaaatggtagagccactctggaaggtagtttggtggtttcttataaaacgaaacatactcttagcatatgatccagcaatcatggcccttggtatttacccaaagaagttcaaaactaagttcacaaaaaaccctgcatatgaatgtttacagtagctttactcataattgccaaaatctggaagcaaccaa-atgcccttaagccggtcaacggataaacaaactgtggtacatacagaccaatgggatattattcagtgctgaaaaagaaataaactgtcaggacatgaaaagacacagaggaaacttaaacgcacattactaagtgaaagaagccaatcagaaaaaagctacataccgtgggattacaactacatgaaatcctgaaaaaggcaaaactatggagatagttaaatgatcagtggttgccaggggttgggttgtggggaggagagagggataaacaagtagagtacagaggatttttagggcagtgaaattactttttatgatgctataatgctagctatatgttatacatggatccaaacccacagaatgtacaccactaagagtaaactctaatggactttagg---tgataaagatatatcaatccaggttcatcagtggtaacaggtgcaccactctggtatgaaa---tgttagtgggggaggccatgcatgtgggggagcagaaggtatatggggtaagtctctactatcttctcagtttactgtgaacctaaaactgctctaaaaaaagagatcttaaaaaaaaag------gtaagattgtttaaagtaataattataatagtgtattgttatatatctaaattatacaggcataatatgtatgacaatagcacaaaagagtgtggggaatgaagctacattagacctaggctgctatatttaaccagaataagacacacatgcatgtgcacacacacataaccattagtaataagttgtgataagtcaaagatgtaattccttgagaaggcactaagaaaatacaagaaacaccagcacaaacaaaaaataactaatg-aaaaaatatcacaaagggatgtaaaaggtacaacaattatgtaacaggaatcagtcaagaaggaaaaaaggaacaataaaaggcatgagacagtaaaatgacagacataaatctacctacattaataattacattaagatgcaaattgactaaatgctccaataaaaagatagaaattttcagaccggatgaagaagcaagaagcaagaagcaagatctacttgtatgcttttt---gggagtgggggatggagtctcactctgtcgcccgagctggagtgccgtggtgcaatctcggttcactccaacctctgcctcttgggttcaagcgagtctcctgcctcagcctcccgagtagctgggattacacacgcacgtcaccatgcccagctaatttttctatttttagtagagacggggtttcaccatgttggccaggctggtctcgaactcccgacctc--atgatccgcccgccttggcctcccaaagtgctgggattacaggcgtgagccaccctgcctgcccc----ctccccctcctttttttttttaaataagagatacatttcagatacaaagcagttgaaacaaaatgacagaaaaaaaacatgtaaacagt-aactataagaaggctgaagtggttacattaatatcagacaaaT-----------------------------------------------------------CGTTT----------------------------------------------------------- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76307757 1926 + 90941950 aaaaaataggACAAAGACCTTACCAGATACCTCACCAAATAAGATATAAAGATAGCAAATAACCACATGAAAGGATGTTCCATgtcatatgtcatcagggaaatgcaaactaa---aacaatgagatacaactgcatatctattagaatggccaaaatccagacaccaaatgctggcgaggatgtggagcagcaggaactctcattcgttgctggtggaaatgcaaaatggtagagCCACTCTGGAAGgtagtttggtggtttcttataAAACGAAACATACTCttagcatatgatccagcaatcatggcccttggtatttacccaaagaagtTCAAAACTAAGTTCACAAAAAACCCTGCATATGAATGTTtacagtagctttattcataattgccaaaatctGGAAGCAACCAA-ATGCCCTTAAGCCGGTCAacggataaacaaactgtggtacatacagaccaatgggatattattcagtgctgaaaaagaaatgaactgtcaggacatgaaaagacacagaggaaacttaaatgcacattactaagtgaaagaagccaatcagaAAAAAGCTACATACCGTGGGATTACAACTACATGAAAtcctgaaaaaggcaaaactatggagatagttaaatgatcagtggttgccaggggttgggttgtggggaggagagagggataAACAAGCAGagtacagaggatttttagggcagtgaaattacTTTTTATGATGCTATAATGCTAGCTATATGTTATACATGgatccaaacccacagaatgtacaccaCTAAGAGTAAACTCTAGTGGACTTTAGG---TGATAAAGATATATCAATCCAGGTTCATCAGTGGTAACAGGTGCACCACTCTGGTATGAAATGTTGTTAGTGGGGGAGGCCATGCATGTGGGGGAGCAGAAAGTATATGGGGTAAGTCTCTACTATCTTCTCAGtttactgtgaacctaaaactgctctaaaaaaagagatcttaaaaaaaaag------gtaagattgtttaaagtaataattataatagtgTATTGTTATATATCTAAATTATACAGGCATAATATGTATGACAATAGCACAAAAGAGTGTGGGGAATGAAGCTACATTAGACCTAGGCTGCTATATTTAACCAGAATaagacacacatgcatgtgcacacacacataaccaTTAGTAATAAGTTGTGATAAGTCAAAGATGTAATTCCTTGAGAAGGCactaagaaaatacaagaaacaccagcacaaacaaaaaataactaatg-aaaaaatatcacaaaGGGATGTAAAAGGTACAACAATTATGTAACAGGAATCagtcaagaaggaaaaaaggaacaatAAAAGGCATGAGACAGTAAAATGACAGACATAAATCTACCTacattaataattacattaagatGCAAATTgactaaatgctccaataaaaagatagaaattttCAGACCGGATGaagaagcaagaagcaagaagcaagaTCTACTTGTATGCTTTTT---GGGagtgggggatggagtctcactctgtcgcccgagctggagtgcagtggtgcaatctcggttcactgcaacctctgcctcttgggttcaagcgagtctcctgcctcagcctcccgagtagctgggattacacacgcacgtcaccacgcccagctaatttttctatttttagtagagacggggtttcaccatgttggccaggctggtctcgaactcccaacctc--atgatccgcccgccctggcctcccaaagtgctgggattacaggcgtgagccaccctgcctgcccc----cctccccccc---ttttttttaaataagagataCACTTCAGATACAAAGCAGTtgaaacaaaatgacagaaaaaaaacatgtaaacaGT-AACTATAAGAAGGCTGAAGTGGTtacattaatatcagacaaat-----------------------------------------------------------cgttt----------------------------------------------------------- i papAnu2.chr10 C 0 C 0 e mm10.chr15 77127845 2759 + 104043685 I e canFam3.chr10 40894645 385 - 69331447 I e calJac3.chr1 198277679 0 + 210400635 C e rheMac3.chr10 80623432 1958 + 95678458 I e chlSab2.chr19 18576221 1986 + 33263144 I a score=15792.000000 s hg38.chr22_KI270876v1_alt 128355 6 + 263666 ccataa s panTro4.chr22 34506010 6 + 49737984 ccataa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30922029 6 + 46535552 ccataa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100473128 6 - 115148730 ccataa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80625390 6 + 95678458 ccataa i rheMac3.chr10 I 1958 C 0 s macFas5.chr10 81051947 6 - 96509753 ccataa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76309683 6 + 90941950 ccataa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18578207 6 + 33263144 ccataa i chlSab2.chr19 I 1986 C 0 e mm10.chr15 77127845 2759 + 104043685 I e canFam3.chr10 40894645 385 - 69331447 I e calJac3.chr1 198277679 0 + 210400635 C a score=1485819.000000 s hg38.chr22_KI270876v1_alt 128361 581 + 263666 aacaagtctc----aataaatt--aaaaaaaattgagatcatgtgaagcgc------------caaagaaattaaattataaatcaataaaagaaagaaatttgggggaaatccccaaacatttggaaaggaaacaacatactcctatgcaacccaggagcaaagaagaaaccacaggaaaaatttttaaaatgtctcgaacgaaaaaaaaataaaaacaatatagatcatattttacggtatgcagctaaagggaaactttctgtgtttacagttttaaacacaaa-----aaggaagaaaatctaaaatcaatcacc-taagcttgcaactcaagaggct--------------------ggcaaaataaagaccaaatcaaac----------------ccaaagcaag-------tagaagaaaga----aataataa----cagagtgg-aaactaatg------aaaaataaaatagaaaaacaac--------------aaaaatcaatgaaaaaaaaagttggtttcctggaaaaatctgcaaaattaataaaccttagctagactgaccaataaaaaaagagagaagacacaaattgccaaatcaagaatataaacagggatatcaccacagaccctacaaaaatt-aaaacgattatatgaaat--------------tatg s panTro4.chr22 34506016 577 + 49737984 aacaagtctc----aataaatt--aaaaaaaattgaaatcatgtgaagcgc------------caaagaaattaaattataaatcaataaaagaaagaaatttgggggaaatccccaaacatttggaaaggaaacaacatactcctatgcaacccaggagcaaagaagaaaccacaggaaaaaattttaaaatgtctcgaacgaaaaaaaa-taaaaacaatatagatcatattttacggtatgcagctaaagggaaactttctgtgtttacagttttaaacacaaa-----aaggaagaaaatctaaaatcaatcacc-taagcttgcaactcaagaggct--------------------ggcaaaataaagaccaaatcaaac----------------ccaaagcaag-------tagaagaaaga----aataataa----cagagtgg-aaactaatg------aaaaataaaatagaaaaacaac--------------aaaaatcaatgaaaaaaaaag---gtttcctggaaaaatctgcaaaattaataaaccttagctagactgaccaataaaaaaagagagaagacacaaattgccaaatcaagaatataaacagggatatcaccacagaccctacaaagatt-aaaacgattatatgaaat--------------tatg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30922035 581 + 46535552 aacaagtctc----aataaattaaaaaaaaaattgaaatcatatgaagctc------------caaagaaattaaattataaatcaataaaagaaagaaattt--gggaaacccccaaacatttggaaaggaaacaacatactcctatgcaacccaggagcaaagaagaaaccacaggaaaaaaattgaaaatgtcgtgaacgaaataaaaataaaaacaaaatatatcatattttatggtatgcagctaaagggaaactttctgtgtttatagttttaaacacaaa-----aaggaagaaaatctaaaatcaatcacc-taagcctgcaactcaagaggct--------------------ggcaaaataaagaccaaatcaaac----------------ccaaagcaag-------tagaagaaaga----aataataa----cagagtgg-aaaataatg------aaaaataaaatagaaaaacaac--------------aaaaatcaatgaaacaaaaagttggtttcctggaaaaatctgtaaaattaataaaccttaactagactgaccaataaaaaaagagagaagacataaattgccaaatcaagaatataaacagggatatcaccacagaccctataaaaatt-aaaaggattatatgacat--------------tatg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100473134 576 - 115148730 aacaagtctc----aataaatt-ttaaaaaaattgaaatcatatgaagctc------------caaagaaattaaattataaatcaataaaagaaagaaattt--gggaaatccccaaacatttggaaaggaaacaacatactcctatgcaacccaggagcaaagaagaaactacaggaaaaaattttaaaatgtcttgaacgaaataaaaataaaaacaaaatagatcatattttatggtatgcagctaaagggaaacttcctgtgtttacagttttaaacacaaa-----aaggaagaaaatctaaaatcaatcacc-taagcttgcaactcaagaggct--------------------ggcaaaataaagaccaaatcaaac----------------ccaaagcaag-------tagaagaaaga-------aataa----cagagtgg-aaaataatg------aaaaataaaatagaaaaacaac--------------aaaaatcaatgaaacaaaaagttggtttcctggaaaaatctgc-aaattaataaaccttagctagactaaccaataaaaaaagagagaagacataaattgccaaatcaagaatataaacagggatatcaccacagaccctataaaaatt-aaaaagattatatgaaat--------------tatg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80625396 582 + 95678458 aacaactctc----aataaata----aaaaaattgaaatcatatgacgctc------------caaagaaattaaattataaatcaataaaagaaagacattt--ggaaaatccccaaacattt-----ggaaacaacatactcctatgcaacccagaagcaaagaagaaaccacaggaaaaaaatttaaaatgtcttgaatgaaataaaaacaaaaacaaaatagatcatattttatggtatgcagctaaagggaaacttgctgtgtttacagttttaaacacaaa-----aaggaagaaaatctaacatcaatcgcc-taactttccaactcaagaggct--------------------ggcaaaataaagaccaaatcaaac----------------tcaaagca----------agaagaaaga----aataataa----cagagtggaaaaataatt--------gaaaaaaatagaaaaacaac--------------aaaaatcaatgaaacaaaaagttggtttcctggaaaaatctacaaaattaataaaccttagctagactgaccaacaaaaaaagagagaagacataaattgccaaatcaagaatgtcaacagggatatcgccacagaccctatacaaatt-aaaaggattatatgaaatnnnnnnnnnnnnnnnnnn i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81051953 567 - 96509753 aacaagtctc----aataaata----aaaaaattgaaatcatatgacgctc------------caaagaaattaaattataaatcaataaaagaaagacattt--gggaaaaccccaaatattt-----ggaaacaacatactcctatgcaacccagaagcaaagaagaaaccacaggaaaaaaatttaaaatgtcttgaatgaaataaaaacaaaaacaaaatagatcatgttttatggtatgcagctaaagggaaacttgctgtgtttacagttttaaacacaaa-----aaggaagaaaatctaacatcaatcgcc-taaccttccaactcaagaggct--------------------ggcaaaataaagaccaaatcaaac----------------tcaaagca----------agaagaaaga----aataataa----cagagtgg-aaaataatt--------gaaaaaaatagaaaaacaac--------------aaaaatcaatgaaacaaaaagttggtttcctggaaaaatctacaaaattaataaaccttagctagactgaccaataaaaaaagagagaagacataaattgccaaatcaagaatgtcaacagggatatcgccacagaccctatacaaatt-aaaaggattatatgaaat--------------tatg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76309689 587 + 90941950 aacaagtctc----aataaata----aaaaaattgaaatcatatgacgctc------------caaagaaattaaattataaatcaataaaagaaagacattt--gGGAAATCCCCAAACATTT-----GGAAACAACATACTCCTATGCAACCCAGAAGCAAAGAagaaaccacaggaaaaaaatttaaaatgtcttgaatgaaataaaaacaaaaacaaaatagatcatATTTTACGGTATGCAGCTAAAGGGAAACTTGCTGTGTTTAcagttttaaacataaa-----aaggaagaaaatctaaCATCAATCGCCTTAACCTTCCAACTCAAGAGGCT--------------------GGcaaaataaagaccaaatcaaactcaaataaagaccaaatcaaagca----------agaagaaaga----aataataa----cagagtgg-aaaataatt-----aaaaaaaaaaatagaaaaacaac--------------aaaaatcaatgaaacaaaaagttggtttcctggaaaaatctacaaaattaataaacCTTAGCTAGACTGaccaataaaaaaagagagaagacacaaattgccAAATCAAGAATGTCAACAGGGATATCGCCACAGACCCTATAcaaatt-aaaaggattatatgAAAT--------------TATG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18578213 579 + 33263144 aacaagtatcaataaataaata----aaaaaattgaaatcatatgaagctc------------caaagaaattaaattataaatcaataaaagaaagacattt--gggaaatccccaaacattt-----ggaaacaacatactcctatgcaacccagaagcaaagaagaaaccacaggaaaaaaatttaaaatgtcttgaatgaaataaaaacaaaaacaaaatagatcatattttatggtatgcagctaaagggaaacttgctgtgtttacagttttaaacacaaa-----aaggaagaaaatctaacatcaatcgcc-taagcttccaactcaagaggct--------------------ggcaaaataaagaccaaatcaaac----------------tcaaagca----------agaagaaaga----aataataa----cagagtgg-aaaataaataaaaaaaaaaaaaaaaaagaaaaacaac--------------aaaaatcaatgaaacaaaaagttggtttcctggaaaaatctacaaaattaataaaccttagctagactgaccaataaaaaaagagagaagacataaattgccaaatcaagaatgtcaacagggatatcgccacagaccctatacaaatt-aaaaggattatatgaaat--------------tatg i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40895030 616 - 69331447 aacaagtctc----agt--ttt----aaaaaattga-accatataaagcatgttctctttccacaatgggattaaattataaatcaagaaaag--------ct--gagaaatcctcaaacatttggaaattaagaaacacacttctatgtaacccagggtcaaagaa-aaatcataaggaaaaattaaaaaatatcttgaatg-----aaaacaaaaataaaatatatcacattttatag---gaaacttaaggggaa--------atgtatagctttaaacacataccaggaagaaaaaaaatctaaaatcaatggtc-taaggctgcaactcaagaggctaaaaaaaaaaaaaaaaaaaaaaaaaaattaagacgaaatcaaac----------------tcaaagctagtcaaagctagaagaaggaaggaaataataaagatcagaatgg-caatcaatg------aaatacataacagaaaaacaacacactaaaaaaaaaaaaaatcaatgaaatcaaaagctggttttccggaaagatgtacaaaattaataaaccttagctagactgaccaagagaaaaaaagagaaggcacaattagcaaaatcaagaataaaagaggggttatcactacagatcctatagaaattaaaaaggattatatgaaat--------------tata i canFam3.chr10 I 385 C 0 e mm10.chr15 77127845 2759 + 104043685 I e calJac3.chr1 198277679 0 + 210400635 C a score=1536831.000000 s hg38.chr22_KI270876v1_alt 128942 552 + 263666 aataactttataccaacaaaattgacaatttatatg---aagc------------aaattgctaaaaagacacaaatt--------acccaaa-----ctaacaaga-------aacagagaataaaaatg-aaaaaaaaa--------------------ccctga-----taattagtatagaaatttat----taattaaaacacCTTGGAAAATCCTCACA--TATATTTTATTTCTTCTTTTTCACTTCTTTAATTGAAACAGTTATTCTGATAGGTCTGTGAGTTCATGATCATTAAAAAGTTATTTGGAAATGCAGTCAATACATCAGCCTGTACGTTTATGATTCTAGAACAAATGCTACTG--AAAGTCTCGTTTGTTACCTATCAAGCCTAGACTCTT-----AAAT----TATCTATTGTAGCCAATTATTTCTGAAGTATAAAATTATGTG-CT--TATACATAACTAATAAACATCGAAAGTA----------------------------GGAATTTCTTGGTGG-----TTCAATACTTGATGAAAGAAAATTGAAAGCATTTATGGGTT--------------------------------------AAATCCATCCT-------------------------------------------------TAGCAAGTGGCTTAAAGGCTGAGTAAAGCTCTCCTTTTCATAACCAGATATAGGAAAGAGAAAAAGAAAT s panTro4.chr22 34506593 557 + 49737984 aataactttataccaacaaaattgacaatttatatg---gagc------------aaattgctaaaaagacacaaatt--------acccaaa-----ctaacaaga-------aacagagaataaaaatg-aaaaaaaaa-------------------accctga-----taattagtatagaaatttat----taattaaaacacCTTGGAAAATCCTCATA--TATATTTTATTTCTTCTTTTTCACTTCTTTAATTGAAACAGTTATTCTGATAGGTCTGTGAGTTCATGATCATTAAAAAGTTATTTGGAAATGCAGTCAATACATCAGCCTGTACGTTTATGATTCTAGAACAAATGCTACTG--AAAGTCTCATTTGTTACCTATCAAGCCTAGACTCTT-----AAATAAATTATCTATTGTAGCCAATTATTTCTGAAGTATAAAATTATGTG-CT--TATACATAACTAATAAACATCGAAAGTA----------------------------GGAATTTTTTGGTGG-----TTCAATACTTGATGAAAGAAAATTGAAAGCATTTATGGGTT--------------------------------------AAATCCATCCT-------------------------------------------------TAGCAAGTGGCTTAAAGGCTGAATAAAGCTCTCCTTTTGATAACCAGATATAGGAAAGAGAAAAAGAAAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30922616 561 + 46535552 aataactttataccaacaaaattgacaatttatatg---aagc------------aaattgctaaaaagacacaaatt--------acccaaa-----ctaacaaga-------aacagagaataaaaatg-aaaaaaaa---------------------ccctga-----taattagtataaaaatttatttagtaattaaaatacCTTGGAAAACCCTCATA--TATATTTTATTTCTTCTTTTTCACTTCTTTAATTGAAACAGTTATTCTGATAGGTCTGTGAGTTCACGATCATTAAAAAGTTACTTGGAAATGCAGCCAATACATCAGCCTGTATATTTATGATTCTAGAACAAATGCTACTG--AAAGTCTCATTTGTTACCTATCATGCCTAGACTCTTC----AAATAAATTATCTATTGTAGCCAATTACTTCTGAAGTATAAAATTATGTGCCT--TATACATAACTAATAAACATCGAAAGTA----------------------------GGAATTTCTTGGTGG-----TTCAATACTTAATGAAAGAAAATTGAAAGCATTTATGGGTT--------------------------------------AAATCCATCCT-------------------------------------------------TAGCAAGTAGCTTAAAGGCTGAATAAAGCTCTCCTTTTGATAACCAGATATAGGAAAGAGAAAAAGAAAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100473710 557 - 115148730 aataactttataccaacaaaattgacaatttatatg---aagc------------aaattgctaaaaagacacaaatt--------acccaaa-----ctaacaaga-------aacagagaataaaaatg-aaaaaaaa---------------------ccctga-----taattagcatagaaatttatttagtaattaaaataccttggaaaagccTCATA--TATATTTTA---CTTCTTTTTCACTTCTTTAATTGAAACAGTTATTCTGATAGGTCTGTGAGTACATGATCATTAAAAAGTTATTTGGAAATGCAACCAATACATTAGCCTATACATTTATGATTCTAGAACAAATGCTACTG--AAAGTCTCATTTGTTACCTATCATGCCTAGACTCTTC----AAATAAATTATCTATTGTAGCCAATTAGTTCTGAAGTATAAAATTATGTG-CT--TATACATAACTAATAAACATCGAAAGTA----------------------------GGAATTTCTTGGTGG-----TTCGATACTTAATGAAAGAAAATTGAAAGCATTTATGGGTT--------------------------------------AAATCCATCCT-------------------------------------------------TAGCAAGTGTCTTAAAGGCTGAATAAAGCTCTCCTTTTGATAACCAGATATAGGAAAGAGAAAAAGAAAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80625978 566 + 95678458 nnnnactttataccaacaaaattgacagtttatatg---aagc------------aaattactaaaaagacacatatt--------atccaaa-----ctaacaaga-------aacagagaataaaaatg-aaaaaaaattaa--------------aaaccctga-----taattagtatagaaattgatttagtgattaaaataccttggaaaagccTCATA--TATATTTTATTTTTTCTTTTTCGCTTCTTTAATTGAAACAGTTATTCTGATAGGTCTGTGAGTTCATGATCATTAAAAAATTATTTGGAAATGTAGTCAATACATGAGCCTGTATATTTATGATTCTAGAACAAATGCTACTG--AAAGTCTCGTTTGTTACCTATCATGCCTAGACTCTTC----AAATAAATTATCTATTGTAGCCAATTACTTCTGAAGTATAAAATTATGTG-CT--TATAC-CAACTAATAAACATTGAAAGTA----------------------------GGAATTTCTTGGTGG-----TTCAATACCTAATGAAAGAAAATTGAAAGCATTTATGGGTT--------------------------------------AAATCCATCCT-------------------------------------------------TAGCAAGTGGCTTAAAGGCTGAATAAAGCTCTCCTTTTGATAACCAGATATAGGAAAGAGAAAAAGAAAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81052520 566 - 96509753 aataactttataccaacaaaattgacagtttatatg---aagc------------aaattactaaaaagacacatatt--------atccaaa-----ctaacaaga-------aacagagaataaaaatg-aaaaaaaattaa--------------aaaccctga-----taattagtatagaaattgatttagtgattaaaataccttggaaaagccTCATA--TATATTTTATTTTTTCTTTTTCGCTTCTTTAATTGAAACAGTTATTCTGATAGGTCTGTGAGTTCATGATCATTAAAAAATTATTTGGAAATGTAGTCAATACATGAGCCTGTATATTTATGATTCTAGAACAAATGCTACTG--AAAGTCTCGTTTGTTACCTATCATGCCTAGACTCTTC----AAATAAATTATCTATTGTAGCCAATTACTTCTGAAGTATAAAATTATGTG-CT--TATAC-CAACTAATAAACATTGAAAGTA----------------------------GGAATTTCTTGGTGG-----TTCAATACCTAATGAAAGAAAATTGAAAGCATTTATGGGTT--------------------------------------AAATCCATCCT-------------------------------------------------TAGCAAGTGGCTTAAAGGCTGAATAAAGCTCTCCTTTTGATAACCAGATATAGGAAAGAGAAAAAGAAAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76310276 566 + 90941950 AATAACTTTATACCAACAAAATTGACAGTTTATATG---AAGC------------AaattactaaaaagacacataTT--------ATCCAAA-----CTAACaaga-------aacagagaataaaaatg-aaaaaaaattaa--------------aaaccctgA-----TAATTAGTATAGAAATTGATTTAGTGATTAAAATACCTTGGAAAAgcctcata--tatattttattttttctttttcgctTCTTTAATTGAAACAGTTATTCTGATAGGTCTGTGAGTTCatgatcattaaaaaattatttggaaatgtaGTCAATACATGAGCCTGTATATTTATGATTCTAGAACAAATGCTACTG--AAAGTCTCGTTTGTTACCTATCATGCCTAGACTCTTC----AAATAAATTATCTATTGTAGCCAATTACTTCTGAAGTATAAAATTATGTG-CT--TATAC-CAACTAATAAACATTGAAAGTA----------------------------GGAATTTCTTGGTGG-----TTCAATACCtaatgaaagaaaattgaaagcattTATGGGTT--------------------------------------AAATCCATCCT-------------------------------------------------TAGCAAGTGGCTTAAAGGCTGAATAAAGCTCTCCTTTTGATAACCAGatataggaaagagaaaaagaaat i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18578792 565 + 33263144 aataactttaccccaacaaaattgacagtttatatg---aagc------------aaattactaaaaagacacatatt--------accca---------aacaaga-------aacagagaataaaaatgaaaaaaaaaaaaa--------------aaaccctga-----taattagtatagaaattgatttagtgattaaaacacCTTGGAAAAGCTTCATA--TATATTTTATTTCTTCTTTTTCGCTTCTTTAATTGAAACAGTTATTCTGATAGGTCTGTGAGTTCATGATCATTAAAAAATTATTTGGAAATGTAGTCAATACATGAGCCTGTATATTTATGATTCTAGAACAAATGCTACTGAAAAAGTCTCATTTGTTACCTATCATGCCTAGACTCTTC----AAATAAATTATCTATTGTAGCCAATTACTTCTGAAGTATAAAATTATGTG-CT--TATAC-CTACTAATAAACATTGAAAGTA----------------------------GGAATTTCTTGGTGG-----TTCAATACCTAATGAAAGAAAATTGAAAGCATTTATGGGTT--------------------------------------AAATCCATCCT-------------------------------------------------TAGCAAGTGGCTTAAAGGCTGAATAAAGGTCTCCTTTTGATAACCAGATATAGGAAAGAGAAAAAGAAAT i chlSab2.chr19 C 0 C 0 s mm10.chr15 77130604 648 + 104043685 agTAATTTTGTATTAATGAAATTATCAACTTAGAGG---AAATAGTTTCTCAAAAAGATTACACAAAAGACCAAAATTGTCAaaaaaccaaaa-----caaacaaaacaacaacaacaaaaaacagaaatg-aagaaacagcaattac----------aaagaTCAT-----TAACTATTCTACAAATAGAGTTTGAAGTTAAAATATCAT-AAAAAGACTCAGA--AATA---TATTTCCCCCTTTCTATTCCTTTGGTAGAA--AGTTGTTATAGGAAGCCTGTGAGTTCAT--TCTTTGAAAGGTGATT---GAACACGGCCAACAGAGCGGCCTGGACAGTCGTCATCC--AAACAAATGCTAC-A--AGAGCCTC--TTGTTAATTCTCAGACCCAGAATCTGCCTTAAAACCAACCGTCCATTACTGCACGTTACTTATG-GGTGTAAAATTGTGTG-TC--TACACAGAAATAACCATCATAGGAAAGATGGCATG--TTCAAGGAAATAATGTTTTTGAGTTTTCCCATGGAGGTCTCTAATTGTCTGTGAAAACAAATAGAAAGCCTTTGCAGGCTCTGTGCACATGATACAATGGGAGAATTTTAGTTTCTAGAAGTGAATCTT-------------------------------------------------TTCCAGATG-CTTCAAGTCTGAATAAGG--TGCCCTCTGCTACTCTGATAC---CAAGAGGAAATGGAAT i mm10.chr15 I 2759 C 0 s canFam3.chr10 40895646 636 - 69331447 aataactttataccaacaaaatagacgattcagatgaaaaaga------------aaattcctagaa--------att--------accaagattgatttgatgtga-------aatagaacatAGAAATA-AACACAGAAAAAGGACAAATAAAAATAAAACTAGAAAAATTAGCTAGTAAAGAAATAGCTTTAGTAATTAATATA-CTTGATAGAACCTCAGATTTACATTTTATTCCTTCTTTCC----------------ACAGTTGTTCTGGTAAGTCTATGAGTTTATAATCCTTTGAAGGTGATTTAGAAATGCAGCCAAGATAGCAGCCGATATATTCATGATTCTGGAACAAACACTA-TG--GAATCCTCATCTGTTACCCATCATGCTTACACCTTCT----TAATAAATGGTC---TGTAGCCCATTACTCATGAAGTATAAAATTATGTG-CTTCTATATATAACTGATCAATATTGAAAAGATAACGTGTTTTCAAGGAAAGAA------TGGATTTCTTTGTGG-----TCTAATATCTAATAAAAGAAAATGGAAAGTATTTGAAGGTT--------------------------------------AAATCCATCCTTATGCAACACAAGCTTCTACTATAAGGCTCTTTATTGGGAAGTAAATCATATCAAGTGTTTTAAAGGCTGGATAA-GCTCTCC---TGATAATCTGAAACAGGAAGAGCAAAAAGAAAT i canFam3.chr10 C 0 C 0 e calJac3.chr1 198277679 0 + 210400635 C a score=235728.000000 s hg38.chr22_KI270876v1_alt 129494 69 + 263666 CTAACGA-CAGAGCTAG-GTCTTTCTATGCAGACTGTAGAACATTTCTATCTTTAGAAATAGACCACACA---A s panTro4.chr22 34507150 69 + 49737984 CTAACGA-CAGAGCTAG-GTCTTTCTATGCAGACTGTAGAACATTTCTATCTTTAGAAATAGACCACACA---A i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30923177 69 + 46535552 CTAACAA-CAGAGCTAG-GTCTTTCTATGCAGATTGTAGAACATTTCTATCTTTAGAAATAGACCACACA---A i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100474267 69 - 115148730 CTAACAA-CAGAGCTAG-GTCTTTCTATGCAGATTGTAGAACATTTCTATCTTTAGAAACAGACCACACA---A i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80626544 69 + 95678458 CTAACAA-CAGAGCTAG-GTCTTTCTATGCAGATTATAGAACATTTCTGTCTTTAGAAATACACCACACA---A i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81053086 69 - 96509753 CTAACAA-CAGAGCTAG-GTCTTTCTATGCAGATTATAGAACATTTCTGTCTTTAGAAATACACCACACA---A i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76310842 69 + 90941950 ctaacaA-CAGAGCTAG-GTCTTTCTATGCAGATTATAGAACATTTCTGTCTTTAGAAATACACCacaca---a i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18579357 66 + 33263144 CT---AA-CAGAGCTAG-GTCTTTCTATGCAGATTATAGAACATTTCTGTCTTTAGAAATACATCACACA---A i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198277679 69 + 210400635 CCATAAA-CAGAGCTAG-GTCTTTCTATGCAGATTATAGAACATTTCTATCTTTAGAAATATACCACACA---A i calJac3.chr1 C 0 C 0 s mm10.chr15 77131252 66 + 104043685 CTA--AA-CATGGCCAACAGCTTGATATG--GACAACAGAGCATGTC---ATTTGGAATCAGACTCCACAGATA i mm10.chr15 C 0 C 0 s canFam3.chr10 40896282 70 - 69331447 CTAAAAACCAGACACAG-ATCTTTCTATCAAGAGCACAGAACATTTTTATCTTTGGAGACAGACCTTGCA---A i canFam3.chr10 C 0 I 260 a score=42198.000000 s hg38.chr22_KI270876v1_alt 129563 17 + 263666 ggctgggcatggtggct------ s panTro4.chr22 34507219 17 + 49737984 ggctgggcatggtggct------ i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30923246 17 + 46535552 ggctgggcatggtggct------ i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100474336 15 - 115148730 ggctgggc--tgtggct------ i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80626613 17 + 95678458 ggctgggtgtggtggct------ i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81053155 17 - 96509753 ggctgggtgtggtggct------ i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76310911 17 + 90941950 ggctgggtgtggtggct------ i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18579423 17 + 33263144 ggctgggtgtggtggct------ i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198277748 17 + 210400635 ggctgggcgttgtggct------ i calJac3.chr1 C 0 C 0 s mm10.chr15 77131318 23 + 104043685 ATTATGATGTGGTGACAGTAGCT i mm10.chr15 C 0 I 233 e canFam3.chr10 40896352 260 - 69331447 I a score=544939.000000 s hg38.chr22_KI270876v1_alt 129580 194 + 263666 catgcctc-taatcccagcactttgggagaccatggtaggaggatagagtgacaggagttcaaaataagcttggacaacaacaaaaggagaccctgtctctacaaaaaaaattaaaaaatgagctgggcgtgg-ggtgtgtgcttgtagtcccagctagatgggaggctgaggcaggaggatcacttgagcccagg s panTro4.chr22 34507236 191 + 49737984 catgcctc-taatcccagcactttgggagaccatggtagcaggatagcgtgacagaagttcaaaataagcttggacaacaa---aaggagaccctgtctctacaaaaaaaattaaacaatgagctgggcgtgg-ggtgtgtgcttgtagtcccagctagatgggaggctgaggcaggaggatcacttgagcccagg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30923263 190 + 46535552 catgcctc-taatcccagcactttgggagaccacggtaggaggatagcatgacaggagttcaaaataagcttgggcaacaa---aaggagaccctgtctctac-aaaaaaattaaaaaacgagctgggcatgg-ggtgtgtgcttgtagtcccagctacatggaaggctgaagcaggaggatcacttgagcccagg i ponAbe2.chr22 C 0 I 287 s nomLeu3.chr7b 100474351 190 - 115148730 catgcctc-taatcccagcactttgggagaccatggtaggaggacagcatgacaggagttcaaaataagcttgggcaacaa---aaggaaaccctgcctctac-aaaaaaataaaaaaatgagctgggtgtgg-ggtgtgtgcttgtagtcccagctacatgggaggctgaggcaggaggctcacttgagcccagg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80626630 191 + 95678458 catgcctcgtaatcccagcactttgggagaccatggcaggaggattgcatgacaggaattcaaaataagcttgggcaacaa---aaggagaccctgtctctac--aaaaaagtaaaaaatgagctgggcgtggtggtgtgtgcttgtagtcccagctacatgagaggctgaagaaggaggatcacttgagcccagg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81053172 191 - 96509753 catgcctcgtaatcccagcactttgggagaccatggcaggaggattgcatgacaggaattcaaaataagcttgggcaacaa---aaggagaccctgtctctac--aaaaaagtaaaaaatgagctgggcgtggtggtgtgtgcttgtagtcccagctacatgagaggctgaagaaggaggatcacttgagcccagg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76310928 191 + 90941950 catgcctcgtaatcccagcactttgggagaccatggcaggaggattgcatgacaGGAATTCAAAAtaagcttgggcaacaa---aaggagaccctgtctctac--aaaaaagtaaaaaatgagctgggcgtggtggtgtgtgcttgtagtcccagctacatgagaggctgaagaaggaggatcacttgagcccagg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18579440 191 + 33263144 catgcctcgtaatcccagcactttgggagaccatggcagaaggattgcatgacaggaattcaaaataagcttgggcaacaa---aaggagaccctgtctctac--aaaaaagtaaaaaatgagctgggcgtggtggtgtgtgcttgtagtcccagctacatgggaggctgaagaaggaggatcacttgagcccagg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198277765 187 + 210400635 catgcctc-taattgcagcacttgtggagaccatggtaggagaattgcatgacaggagtccataataagcctgagcaacaa---aagaagaccctgtctctaa-----acaataaaaaatgagctgggtgtggtggtatatgcttgtagttccagctacacgggaggctgaggcaggagaatcacttgagcccagg i calJac3.chr1 C 0 C 0 e mm10.chr15 77131341 233 + 104043685 I e canFam3.chr10 40896352 260 - 69331447 I a score=129303.000000 s hg38.chr22_KI270876v1_alt 129774 41 + 263666 agactgaggttgcagtgagctagctatgttcatgccactgc s panTro4.chr22 34507427 41 + 49737984 agactgaggttgcagtgagctagctatgttcatgccactgc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30923740 41 + 46535552 agactgagggtgcagtgagctagctatgttcatgccactgc i ponAbe2.chr22 I 287 C 0 s nomLeu3.chr7b 100474541 41 - 115148730 agactgaggttgcagtgagctagctatgttcatgccactgt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80626821 41 + 95678458 agactgaggttgcagtgagctagctatgttcatgccactgc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81053363 41 - 96509753 agactgaggttgcagtgagctagctatgttcatgccactgc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76311119 41 + 90941950 agactgaggctgcagtgagctagctatgttcatgccactgc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18579631 41 + 33263144 agactgaggttgcagtgagctagctatgttcatgccactgc i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198277952 37 + 210400635 agactgaggttgcagtg----agctatgttcatgccattgc i calJac3.chr1 C 0 C 0 e mm10.chr15 77131341 233 + 104043685 I e canFam3.chr10 40896352 260 - 69331447 I a score=96837.000000 s hg38.chr22_KI270876v1_alt 129815 28 + 263666 actccagcctggacaacaaagcaagaGA s panTro4.chr22 34507468 28 + 49737984 actccagcctggacaacaaagcaagaGA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30923781 28 + 46535552 actccagcctggacaacaaagcaagaGA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100474582 28 - 115148730 actccagcctggacaacaaagcaagaGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80626862 28 + 95678458 actccagcctgggcaacaaagcaagaGA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81053404 27 - 96509753 actccagcct-ggcaacaaagcaagaGA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76311160 28 + 90941950 actccagcctgggcaacaaagcaagaga i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18579672 28 + 33263144 actccagcctgggcaacaaagcaagaGA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198277989 28 + 210400635 actccagcctgggtgacaaagcaagaGA i calJac3.chr1 C 0 C 0 s mm10.chr15 77131574 28 + 104043685 ATTGcagactagacagaaaattaagaaa i mm10.chr15 I 233 I 378 e canFam3.chr10 40896352 260 - 69331447 I a score=171470.000000 s hg38.chr22_KI270876v1_alt 129843 57 + 263666 CAATACAATTTCCCATATGTTGGTATGTATGAGATATATACCTATTATTAATTTATG s panTro4.chr22 34507496 57 + 49737984 CAATACAATTTCCCATATGTTGGTATGTATGAGATACATACCTATTATGAATTTATG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30923809 57 + 46535552 CAATACAATTTCCCATATGTTGATATGTATGAGATACATACCTATTATTAATTTATG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100474610 57 - 115148730 CAATACAATTTCCCATATGTTGATATGTATGAGATACATACCTATTATTAATTTACG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80626890 57 + 95678458 CAATACAATTTCCCATATGTTGATATGTATGAGATACATACCTATTATTAATTTATG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81053431 57 - 96509753 CAATACAATTTCCCATATGTTGATATGTATGAGATACATACCTATTATTAATTTATG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76311188 57 + 90941950 cAATACAATTTCCCATATGTTGATATGTATGAGATACATACCTATTATTAATTTATG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18579700 57 + 33263144 CAATACAATTTCCCATATGTTGATATGTATGAGATACATACCTATTATTAATTTATG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198278017 53 + 210400635 CAATACAATTATCCTTATGTTGA----TATGAAATATACACCTATTATTAATTTATG i calJac3.chr1 C 0 C 0 e mm10.chr15 77131602 378 + 104043685 I e canFam3.chr10 40896352 260 - 69331447 I a score=801246.000000 s hg38.chr22_KI270876v1_alt 129900 254 + 263666 ACATTTCCTTTACTTTAGCAAGTTagtagtaagaggtgaagtcaaagaggtaagctggggctagagactag----taaaccaagtacggagttcagattatattctaattgcattagggaactattaagagttaagtaggaaatcggca-----tttgca-ttaaaaaaaaaa--aaaaacca-ccttagtc-----ctat-gtggaggatagata---agttaggcaacagtaataccggaaataagtgatgaggtttggactagagcagtgatg s panTro4.chr22 34507553 255 + 49737984 ACATTTCCTTTACTTTAGCAAGTTagtagtaagaggtgaagtcaaagaggtaagctggggctagagactag----taaaccaagtacggagttcagattatattctaattgcattagggaactattaagagttaagtaggaaatcagca-----tttgca-ttaaaaaaaaaa--aaaaaaaaaccttagtc-----ctat-gtggaggatagata---agttaggcaacagtaataccagaaataagtgatgaggtttggactagagcagtgatg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30923866 250 + 46535552 ACATTTCCTTTACTTTAGCAAGTTaatagtaagaggtgaggtcaaagaggtaagctggggctagagactag----taaaccaagtacagagttcagattatattctaattgcattagggaacta-taagagttaagtaggaaatcggca-----tttgca-tt---aaaaaaa--aaaaacca-ccttagtc-----ctat-gtggaggatagata---agttaggcaacagtaataccggaaataagtgatgaggtttggactagagtagtgatg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100474667 249 - 115148730 ACATTTCCTTTACGTTAGCAAGTTagtagtaagaggtgaggtcaaagaggtaagctggggctagagactag----taaaccaagtacagagttcagattacattctaattgcattagggaactattaagagttaagtaggaaatcggca-----ttcgca-tt-----aaaaa--aaaaacca-ccttagtc-----gtat-gtggaggatagata---agttaggcaacagtaataccggaaataagtgacgagatttggactagagtagtgatg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80626947 253 + 95678458 ACATTTCCTTTACTTTAGCAAGTTagtagtaagaggtgaggtcaaagaggtaaact-gggctagagactag-----aaaccaagtacaaagttcagattatattctaattgcactacggaactattaagagttaagtaggaaatcggcaaaa--tttgcg-tt--aaaaaaaa--caaaacca-ccttagtc-----ctat-gtggaggatagata---agttaggcaacagtagtatcggaaatcagtgatgaggtttggactagagtggtgatg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81053488 252 - 96509753 ACATTTCCTTTACTTTAGCAAGTTagtagtaagaggtgaggtcaaagaggtaagct-gggctagagactag-----aaaccaagtacaaagttcagattatattctaa-tgcattacggaactattaagagttaagtaggaaatcggcaaaa--tttgcg-tt--aaaaaaaa--caaaacca-ccttagtc-----ctat-gtggaggatagata---agttaggcaacagtaatatcggaaatcagtgatgaggttTGGACTAGAGTGGTGATG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76311245 255 + 90941950 ACATTTCCTTTACTTTAGCAAGTTAGTAGTAAGAGGTGAGGTCAAAGAGGTAAGCT-GGGCTAGAGACTAG-----AAACCAAGTACAAAGTTCAGATTATATTCTAATTGCATTACGGAACTATTAAGAGTTAAGTAGGAAATCGGCAAAAATTTGacg-tt--aaaaaaaa--caaaacca-ccttaGTC-----CTAT-GTGGAGGATAGATA---AATTAGGCAACAGTAATATCGGAAATCAGTGATGAGGTTTGGACTAGAGTGGTGATG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18579757 255 + 33263144 ACATTTCCTTTACTTCAGCAAGTTagtaggaagaggtgaggtcaaagaggtaagct-gggctagagactag----taaaccaagtacaaagttcagattatattctaattgcattagggaactattaagagttaagtaggaaatcggcaaaa--tttgcgttt--aaaaaaaa--caaaacca-ccttagtc-----ctat-gtggaggatagata---agttaggcaacagtaatatcggaaatcagtgatgaggttTGGACTAGAGTGGTGATG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198278070 262 + 210400635 ACATTTCCTTTACTTTAGCAAGTTagtagtaaaaggtgaggtcaaagagataagctggggctagagactagtaaataaaccaagtacagagtttgaattttattctaattgcattagcgaacgattaatagttaagtaggaaatcggcaaaa--tttgca-tt--aaaaaaaacccaaaacta-tcttagtg-----ctacagtgaaggatagaca---agttaggcagcagtaatcccggaaataagtgatgaggtttggactagaatggtgATG i calJac3.chr1 C 0 C 0 s canFam3.chr10 40896612 253 - 69331447 ACATTTCTTTTATTTTAGCAAGTTagtagtaagagacaaagtcaaagaggtaggctggggccagggattag----taaacgaagtacagggtttggattttattgtaaatatgtaagggaatcatt-agagttaagcaggaagt-acca-----tt---a-tt--tgagaaga--cagaac---actaggtcggctgttgt-gtggggaagggatagtcaggcaggcaGCAGTTACACGAAAAATAAGCCATGAGGTCTGGACCAAGGTGGAGATG i canFam3.chr10 I 260 C 0 e mm10.chr15 77131602 378 + 104043685 I a score=738414.000000 s hg38.chr22_KI270876v1_alt 130154 240 + 263666 ------atgata--------------aattcttttaaatttcctaacagcctcttcaggtaggtactattatcttcattt----------------------------tagagtgagccaagggcagagaga--ttaaataactggtccaa------------ggtcacacagtttagtaggggccatattgagattcaaacacaagcaatttggtgga-----------------------------------agagtAATAAGATGT-----------AGAGAAGA--------AGACGAAGTAGtt--------------------ttagagttatggttgtcaagacttgctaatcaattagatgtacagat s panTro4.chr22 34507808 242 + 49737984 ------atgatg--------------aattcttttaaatttcctaacagcctcttcaggtaggtactattatcttcattt----------------------------tagagtgagccaagggcagagagagattaaataactggtccaa------------ggtcacacagtttagtaggggccatactgagattcaaacacaagcaatttggtgga-----------------------------------agagtAATAAGATGT-----------AGAGAAGA--------CGACGAAGTAGtt--------------------ttagagttatggttgtcaagacttgctaatcaattagatgtacagat i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30924116 242 + 46535552 ------atgata--------------aattcttttaaatttcctaacagcctcttcaggtaggtactattatcttcattt----------------------------tagagtgagccaagggcagagagagattaaataagtggtccaa------------ggtcacacagtttagtaggggccatattgagattcaaacacaagcaattcagtgga-----------------------------------agagtAATAAGATGT-----------AGAGAAGA--------AGATGAAGTAGtt--------------------ttagagttatggttgtcaagacttgctaatcaattagatgtacagat i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100474916 242 - 115148730 ------atgata--------------aattcttttaaatttcctaacaacctcttcaggtaggtactattatcttcattt----------------------------tagagtgagccaagggcagagagagattaaataactggtccaa------------ggtcatacagtttagcaggggccatattgagattcaaacacaagcaatttggtgga-----------------------------------agagtAATAAGATGT-----------AGAGAAAA--------AGATGAAGTAGtt--------------------ttagagttatggttgtcaagacttgctaatcaattagatgtacagat i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80627200 240 + 95678458 ------atgata--------------aatccttttaaatttcctaacagcctcttcaggtaggtatgattatcttcattt----------------------------tagagtgaaccaacagcagagagagattaaataactggtccaa------------gggcacacagtttagtaggggccatactgagattcaaacacaagtaatctggTGGA-----------------------------------AGAGCAATAAGATGT-----------GGAGAAGA--------GGATGAAGTAGTT----------------------AGAGTTATGGTTGTCAAGACTTGCTAATCAATTAGATGTGCAGaa i rheMac3.chr10 C 0 I 97 s macFas5.chr10 81053740 240 - 96509753 ------ATGata--------------aatccttttaaatttcctaacagcctcttcaggtaggtatgattatcttcattt----------------------------tagagtgaaccaacagcagagagagattaaataactggtccaa------------gggcacacagtttagtaggggccatattgagattcaaacacaagtaatctggTGGA-----------------------------------AGAGCAATAAGATGT-----------GGAGAAGA--------GGATGAAGTAGTT----------------------AGAGTTATGGTTATCAAGACTTGCTAATCAATTAGATGTGCAGaa i macFas5.chr10 C 0 I 152 s papAnu2.chr10 76311500 241 + 90941950 ------ATGATA--------------AATCCTTTTTAATTTCCTAACAGCCTCTTCAGGTAGGtatgattatcttcattt----------------------------tagagTGAACCAACAGcagagagagattaaataactggTCCAA------------GGGCACACAGTTTAGTAGGGGCCATATTGAGATTCAAACACAAGCAATCTGGTGGA-----------------------------------AGAGCAATAAGATGT-----------GGAGAAGA--------GGATGAAGTAGTT---------------------AAGAGTTATGGTTGTCAAGACTTGCTAATCAATTAgatgtgcagag i papAnu2.chr10 C 0 I 85 s chlSab2.chr19 18580012 240 + 33263144 ------ATGata--------------aatccttttaaatttcctaacagcctcttcaggtaggtatgattatcttcattt----------------------------tagagtgaaccaacagcagagagagattaaataactggtccaa------------gggcacacagtttagcaggggccatattgagattcaaacacaagcaatctggTGGA-----------------------------------AGAGCAATAAGATGT-----------GGAGAAGA--------GGATGAAGTAGTT----------------------AGAGTTATGGTTGTCAAGACTTGCTAATCAATTAGATGTGCAGaa i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198278332 237 + 210400635 ------AGGata--------------aattcttttaaatttcctaacagcctcttcaggtaggtactattatcttcattt----------------------------tagagtgagccaagggcaaagagagattaaataactggtccaa------------ggtcaaacactttagtaggggccatactaagattcaa--acaaacaatctggtgga-----------------------------------agagtagtaagatgt-----------agagaa-----------ggtgaagtagtt--------------------ttagagttacggttatcaagacttgctagtcaattagatgtgaagat i calJac3.chr1 C 0 C 0 s mm10.chr15 77131980 274 + 104043685 ------ATCATA--------------AACTCTTGGAATGTCCTTGACAG-CTTTTGAAGTAGGCATTATGACCTTCATTT----------------------------TCTTGAATTTCGA-GGCAAAGGAACATTAAATAACTTGCCTAAACTTCTGAGGCCAGGCTATCATTTAATCTCTAGTCATCT---GAATCAACCCCAAACAG-CTGGCAGA-----------------------------------AGAGC--TAAGCTCTCCCTCTGCCTGGGAGAAGA--------TGAGAACTGAGCTGTCCACTGCTGCACACTGCTGTGGAACTGTGCTTGCTACA--CTCCTAAT-GACTAAGGGTAGAAAT i mm10.chr15 I 378 C 0 s canFam3.chr10 40896865 314 - 69331447 ACGACAATGATAATGTACATGAATTCAACTCTTTTAAATCTCCTAGTGGCCAGCAGAGGCAGGCACTGCTGTCGTTCTTTGCCAGGTGCAGGTATGTATTTGCTGTCACCGAGCAAGCCAATGCAGGAAAGAGGTTAAATAT---------------------AGTCATGCCACTAAGCAGGGCCC-------TACTCAAACCCAAGAAATCTGGCAGGATAGCTGAGCTGTTAAGCATGTACACCATCCAGTCAGAGTACCAAGATAA-----------AGAGAAGAGCCGAAGGGAAAGAATGAATT----------------------CGAGTTACAGTTACTG-GATTCGCAAAGGCACTGGGTGTGGAGAT i canFam3.chr10 C 0 C 0 a score=21653.000000 s hg38.chr22_KI270876v1_alt 130394 9 + 263666 gaaagaaag s panTro4.chr22 34508050 9 + 49737984 gaaagaaag i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30924358 9 + 46535552 gaaagaaag i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100475158 6 - 115148730 gaaaga--- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80627537 9 + 95678458 gaaagaaag i rheMac3.chr10 I 97 C 0 s macFas5.chr10 81054132 9 - 96509753 gaaagaaag i macFas5.chr10 I 152 C 0 s papAnu2.chr10 76311826 9 + 90941950 gaaggaagg i papAnu2.chr10 I 85 C 0 s chlSab2.chr19 18580252 9 + 33263144 gaaagaaag i chlSab2.chr19 C 0 I 130 s calJac3.chr1 198278569 9 + 210400635 gaaagaaat i calJac3.chr1 C 0 C 0 s mm10.chr15 77132254 7 + 104043685 -GAGGAGT- i mm10.chr15 C 0 C 0 s canFam3.chr10 40897179 9 - 69331447 GAAGGAAAT i canFam3.chr10 C 0 C 0 a score=5994.000000 s hg38.chr22_KI270876v1_alt 130403 2 + 263666 aa s panTro4.chr22 34508059 2 + 49737984 aa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30924367 2 + 46535552 aa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100475164 2 - 115148730 aa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80627546 2 + 95678458 aa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81054141 2 - 96509753 aa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76311835 2 + 90941950 aa i papAnu2.chr10 C 0 C 0 s calJac3.chr1 198278578 2 + 210400635 aa i calJac3.chr1 C 0 C 0 s mm10.chr15 77132261 2 + 104043685 AA i mm10.chr15 C 0 C 0 s canFam3.chr10 40897188 2 - 69331447 GG i canFam3.chr10 C 0 C 0 e chlSab2.chr19 18580261 130 + 33263144 I a score=288981.000000 s hg38.chr22_KI270876v1_alt 130405 111 + 263666 agaaagaatatt-cctaggttttgct------------tgagTTTGGTAGTATAATTAT----GCagagaaaggatat-------------------------------------aaaataaaaagaaaaggggtt------------------------------------ccaggacctacatatggagtactgcacca s panTro4.chr22 34508061 111 + 49737984 agaaagaatatt-cctaggttttgct------------tgagTTTGGTAGTATAATTAT----GCagagaaaggatat-------------------------------------aaaataagaagaaaaggggtt------------------------------------ccaggacctacatatggagtactgcacca i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30924369 105 + 46535552 ataaagaatatt-cctaggttttgct------------tgagTTTGGTAGTATAa----------agagaaaggatgt-------------------------------------aaaataggaagaaaaggggtt------------------------------------ccaggacctacatatggagtactacacca i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100475166 111 - 115148730 ataaagaatatt-cctaggttttgct------------tgagTTTGGTAGTATAATTAT----GTagagaaaggatgt-------------------------------------aaaataagaagaaaaggggtt------------------------------------ccaggacctatatatggagtattgcacca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80627548 119 + 95678458 agaaagaaagat-cctaggttttgcttgagcaac----tgAGTTTGGTAGTATAATTAT----ATagagaaaggatgt-------------------------------------ataataataagaaaaggggtt------------------------------------ccaggacctacacatggagtactgcacca i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81054143 119 - 96509753 agaaagaaTATT-TCTAGGTTTTGCTTGAGCAAC----TGAGTTTGGTAGTATAATTAT----ATagagaaaggatgt-------------------------------------ataataagaagaaaaggggtt------------------------------------ccaggacctacacatggagtactgcacca i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76311837 119 + 90941950 ggaaggatcgaT-CCTAGGTTTTGCTTGAGCAAC----TGAGTTTGGTAGTATAATTAT----ATAGAGAAAGGATGT-------------------------------------ATAATAAGAAGAAAAGGGGTT------------------------------------CCAGGACCTACACATGGAGTACTGCacca i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18580391 119 + 33263144 agagagaatatt-cctaggttttgcttgagcaac----tgAGTTTGGTAGTATAATTAT----ATagagaaaggatgt-------------------------------------ataataagaagaaaaggggtt------------------------------------ccaggacctacacatggaatactgcacca i chlSab2.chr19 I 130 C 0 s calJac3.chr1 198278580 91 + 210400635 ----agactatt-cctaggtttttcttgagcaac----tAAGCTTGGTAGTATAATTAT----GTAGAGAAAGGATGT-------------------------------------AAAATAAGAAGAAAAGGGGTT------------------------------------CCAGG------------------------ i calJac3.chr1 C 0 C 0 s mm10.chr15 77132263 83 + 104043685 GGACACAGTGATGCCTGGCTTTGGCTTGGGACAG----TGAA-TTGGCGGTGTAAGTAT----GCAGAGAAAG-------------------------------------------------------------------------------------------------------------CACCCAGAACACTGCAACA i mm10.chr15 C 0 C 0 s canFam3.chr10 40897190 196 - 69331447 ----AGAAGACT-CCTAGGTTTTGCGTGAGTAGCAAGGTGAATTTAGTAGTAGAATTATACCGACAGAGGAAGGGGGTTCCTAAGGACCCAGGCCTGGAGTGCTGTAACATCTAAATACTGAACAGAAgggagcttaggtggctcagtatgccttcagcttgggtcatgatcccagggccctggtattgagccccatatca i canFam3.chr10 C 0 I 106 a score=437507.000000 s hg38.chr22_KI270876v1_alt 130516 141 + 263666 tttaaaagt-----------------tgaacagagaaggaggcaggagc---------------agaacacccagtgcttggcaggaaaattgggagagctcgaaa---agccaagagactaagtatttctaggaggagggag-gacaatgt-------------------------------------------------atacaatg-----------------------------------------------ctgttgag--aga-------------------------------------------aggtgt s panTro4.chr22 34508172 141 + 49737984 tttaaaagt-----------------tgaacagagaaggaggcaggagc---------------agaacacccagtgcttggcaggaaaattgggagagctcgaaa---agccaagagactaagtatttctaggaggagggag-gacaatgt-------------------------------------------------atacaatg-----------------------------------------------ctgttgag--agA-------------------------------------------AGGTGT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30924474 141 + 46535552 tttaaaagt-----------------tgaacagagaaggaggcaggagc---------------agaacacccagcgcttggcaggaaaattgggagagctcaaaa---agccaagagactaagtatttctaggaggagggag-gacaatgt-------------------------------------------------atacaatg-----------------------------------------------ctgctgag--aga-------------------------------------------aggtgt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100475277 141 - 115148730 tttaaaagt-----------------tgaacagagaaggaggcaggagc---------------agaacacccagtgcttggcaggaaaattgggagagctcgaaa---agccaagagactaagtatttctaggaggagggag-gacaatgt-------------------------------------------------atacaatg-----------------------------------------------ctgctgag--aga-------------------------------------------aggcgt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80627667 141 + 95678458 tttaaaaat-----------------tgaacagagaaggaggcaggggc---------------agaacacccaatgctcggcaggaaaattggtagagctggaaa---agccaagagactaagtatttctaggaggagggag-gacaatgt-------------------------------------------------gtacaacg-----------------------------------------------ctgctgag--aga-------------------------------------------aggtgt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81054262 141 - 96509753 tttaaaaat-----------------tgaacagagaaggaggcaggggc---------------agaacacccaatgctcggcaggaaaattggtagagctggaaa---agccaaaagactaagtatttctaggaggagggag-gacaatgt-------------------------------------------------gtacaacg-----------------------------------------------ctgctgag--aga-------------------------------------------aggtgt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76311956 141 + 90941950 tttaaaaat-----------------tgaacaGAGAAGGAGGCAGGGGC---------------AGAACACCCAATGCTCGGCAGGAAAATTGGTAGAGCTGGAAA---AGTCAAGAGACTAAGTATTTCTAGGAGGAGGGAG-GACAATGT-------------------------------------------------GTACAACG-----------------------------------------------CTGCTGAG--AGA-------------------------------------------AGGTGT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18580510 141 + 33263144 tttaaaaat-----------------tgaacagagaaggaggcaggggc---------------agaacacccaatgctcggcaggaaaattggtagagctggaaa---agccaagagactaagtatttctaggaggagggag-gacaatgt-------------------------------------------------gtacaacg-----------------------------------------------ctgctgag--aga-------------------------------------------aggtgt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198278671 135 + 210400635 ------AGC-----------------TGAACAGAGAAAGAGGCAGCAGC---------------AGAAGAGCCAGTGCTTGGCAGGAAAACCGGGACAGCATGAAA---AGCCAAAAGACAAAGTATTTCTAGGAGGAGAAAG-GATAATGT-------------------------------------------------ATACAATG-----------------------------------------------CTGCTGAG--AGA-------------------------------------------AGGTGT i calJac3.chr1 C 0 C 0 s mm10.chr15 77132346 242 + 104043685 TCTGACATC-----------------TGAACAAGAGGAGAAGGAACATC---------------ACAGCACCCAGGGCTGAGCAGGAAAACCAGGAGGAGGGGCAAGTCATTTAGATGGCCCAGAGTTCCAAGGAACAAGGAG-GAGGCTGTGCGAGACAGCCTGTGAGACTGTGCAGATGAGGCTGGGTGTGGGGGATTCATACAATGGAGGGTGCTTCCAGGCAGCAGTAGCGAGGTTTAGTTCAAGCTCCCCACTGTCCAGCCACA-------------------------------------------AGGCTT i mm10.chr15 C 0 C 0 s canFam3.chr10 40897492 216 - 69331447 tttaaaaaTTAAAAAAAAAAAAAAACTGAACACAGAGATAGGAATCAGCAAAGGGAACTAAGAGAGAACTTTCAGTGTGCAGGAGGGCAACAGGGAGTATCCTAAG---AG-CAAGAGACTGAGCAGGTCTGGGGGAAGGGAGAGGCAATGT-------------------------------------------------ACGGGATG-----------------------------------------------CTGCTGAG--agactgtgtactgtggcagcacaggagggcacccctcctaataaggaggtgt i canFam3.chr10 I 106 I 159 a score=1850034.000000 s hg38.chr22_KI270876v1_alt 130657 444 + 263666 aaatgagaacAG--------------------------GTGTAAATGCTAAATTAATTCCGAGAGTCTTCTAATTGTATAATTAAGGCGACAATTTCTATATGATTGCCATGCATCCTTCCATTTTTCACCTCATGGTCCACGTACCGTAAGAGATCCATTTTGTGTGCTGGGTGAGTTGCTGCTCTGCTCCCCGTGGGCTTGCGTACTTCCGTAGAGTGTCAGGTTATGCTCACCGGTCTGGCCGGCATAGTCTTGAGTGTGTGGCACCCCATACTCTGTGGGAATTCCATTCTGCGGAGGTGGTGGAAATGGGATGGTAGTAAAAGGCTGAACCATTGCGTCAGGAGTTGTTGTCGGCTCCTGGTTACCCTAAAACAAACAAC----AAGAGAA-----AGAAAAAGTGACT--TTGAATCCTTGTTACGTAACTATTTTTAAAGTGAGTATATGGAATTCTCTGAATATTCTCTCACT s panTro4.chr22 34508313 428 + 49737984 AAATG------------------------------------------CTAAATTAATTCCGAGAGACTTCTAATTGTATAATTAAGGCGACGATTTCTATATGATTGCCATGCATCCTTCCATTTTTCACCTCATGGTTCACGTACCGTAAGAGATCCATTTTGTGTGCTGGGTGAGTTGCTGCTCTGCTCCCCGTGGGCTTGCGTACTTCCATAGAGTGTCAGGTTATGCTCACCGGTCTGGCCGGCATAGTCTTGAGTGTGTGGCACCCCATACTCTGTGGGAATTCCATTCTGCGGAGGTGGTGGAAATGGGATGGTAGTAAAAGGCTGAACCATTGCGTCAGGAGTTGTTGTCGGCTCCTGGTTACCCTAAAACAAACAAC----AAGAGAA-----AGAAAAAGTGACT--TTGAATCCTTGTTACGTAACTATTTTTAAAGTGAGTATATGGAATTCTCTGAATATTCTCTCACT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30924615 444 + 46535552 aaatgagaacAG--------------------------GTATAAATGCTAAATTAGTTCTGAGAGTTTTCTAGTTGTATAATTAAGGTGACGATTTCAATATGATTGCCATGCATCCTTCCATTTTTCACCTCATGGTTCACGTACCGTAAGAGATCCATTCTGTGTGCTGGGTGAGTTGCTGCTCTGCTCCCCGTGGGCTTGCGTACTTCCGTAGAGTGTCAGGTTATGCTCACCGGTCTGGCCGGCATAGTCTTGAGTGTGTGGCACCCCATACTCTGTGGGAATTCCATTCTGCGGAGGTGGTGGAAATGGGATGGTAGTAAAAGGCTGAACCATTGCGTCAGGAGTTGTTGTCGGCTCCTGGTTACCCTAAAACAAACAAC----GAGAAAA-----AGAAAAAGTGACT--TTGAATCCTTGTTACGTAACTATTTTTAAAGTGAGTATATGGAATTCTCCAAATATTCTCTCACT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100475418 441 - 115148730 aaatgagaacAG--------------------------GTGTAAACGCTAAATTAATTCCAAGAGTTTTCTAGTTGTATAATTAGGGTGATGATTTCGATATGATTGCTATGCATCCTTCCATTTTTCACCTCATGGTTCACGTACCGTAAGAGATCCATTTTGTGTGCTGGGTGAGTTGCTGCTCTGCTCCCCGTGGGCTTGCGTACTTCCGTAGAGTGTCAGGTTATGCTCACCGGTCTGGCCGGCATAGTCTTGAGTGTGTGGCACCCCATACTCTGCGGGAATTCCATTCTGCGGAGGTGGTGGAAATGGGATGGTAGTAAAAGGCTGAACCATTGCGTCAGGAGTTGTTGTCGGCTCCTGGTTACCCTAAAACA---AAC----GAGAAAA-----AGAAAAAGTGACT--TTGAATCCTTGTTACGTAACTATTTTTAAAGTGAGTATATGGAATTCTCTGAATATTCTCTCACT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80627808 444 + 95678458 acatgagaacAT--------------------------ATGTAAATGCTAAATTAATTCCGAGAGTTTTCCAGTTGTATAAACAAGGTGACAATTTCGATAAGATTGTCACGCGTTCTTCTATTTTTCACCTCATGGTTCACATACCGTAAGAGATCCATTTTGTGTGCTGGGTGAGTTGCTGCTCTGCTCCCCGTGGGCTTGCGTACTTCCGTAGAGTGTCAGGTTATGCTCACCGGTCTGGCCGGCATAGTCTTGAGTGTGTGGCACCCCATACTCTGTGGGAATTCCATTCTGCGGAGGTGGTGGAAATGGGATGGTAGTAAAAGGCTGAACCATTGCGTCAGGAGTTGTTGTTGGCTCCTGGTTACCCTAAAACAAACAAC----GAGAAAA-----AGAAAAAGTGACT--CTGAATCCTTGTTACGTAACTATTTTTAAAGTGAATATATGGAATTCTCTGAATATTCTCTCACT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81054403 444 - 96509753 acatgagaacAT--------------------------ATGTAAATGCTAAATTAATTCCGAGAGTTTTCCAGTTGTATAATCAAGGTGACAATTTCGATAAGATTGCCACGCATTCTTCTATTTTTCACCTCATGGTTCACATACCGTAAGAGATCCATTTTGTGTGCTGGGTGAGTTGCTGCTCTGCTCCCCGTGGGCTTGCGTACTTCCGTAGAGTGTCAGGTTATGCTCACCGGTCTGGCCGGCATAGTCTTGAGTGTGTGGCACCCCATACTCTGTGGGAATTCCATTCTGCGGAGGTGGTGGAAATGGGATGGTAGTAAAAGGCTGAACCATTGCGTCAGGAGTTGTTGTTGGCTCCTGGTTACCCTAAAACAAACAAC----GAGAAAA-----AGAAAAAGTGACT--CTGAATCCTTGTTACGTAACTATTTTTAAAGTGAATATATGGAATTCTCTGAATATTCTCTCACT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76312097 440 + 90941950 ACATGAGAACAT--------------------------ATGTAAATGCTAAATTAATTCCGAGAGTTTTCCAGTTGTATAATCAAGGTGACAATTTCGATAAGATTGCCATGCATTCTTCTATTTTTCACCTCATGGTTCACATACCGTAAGAGATCCATTTTGTGTGTTGGGTGAGTTGCTGCTCTGCTCCCCGTGGGCTTGCGTACTTCCGTAGAGTGTCAGGTTATGCTCACCGGTCTGGCCGGCATAGTCTTGAGTGTGTGGCACCCCATACTCTGTGGGAATTCCATTCTGCGGAGGTGGTGGAAATGGGATGGTAGTAAAAGGCTGAACCATTGCGTCAGGAGTTGTTGTTGGCTCCTGGTTACCCTA----AAACAac----gagaaaa-----agaaaaagtgact--cTGAATCCTTGTTACGtaactatttttaaagtgaatacATGGAATTCTCTGAATATTATCTCACT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18580651 444 + 33263144 acatgagaacAT--------------------------ATGTAAATGCTAAATTAATTCCGAGAGTTTTCCAGTTGTATAATCAAGGTGACAATTTCGATAAGATTGCCACGCATTCTTCTATTTTTCACCTCATGGTTCACATACCGTAAGAGATCCATTTTGTGTGCTGGGTGAGTTGCTGCTCTGCTCCCCGTGGGCTTGCGTACTTCCGTAGAGTGTCAGGTTATGCTCACCGGTCTGGCCGGCATAGTCTTGAGTGTGTGGCACCCCATACTCTGTGGGAATTCCATTCTGCGGAGGTGGTGGAAATGGGATGGTAGTAAAAGGCTGAACCATTGCGTCAGGAGTTGTTGTTGGCTCCTGGTTACCCTAAAACAAACAAC----GAGAAAA-----AGAAAAAGTGACT--CTGAATCCTTGTTACATAACTATTTTTAAAGTGAATATATGGAATTCTCTGAATATTCTCTCACT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198278806 444 + 210400635 AAACGAGAACAG--------------------------GTATAAATGCTGAATTAATGTAGAGAGTTTTCTAGTTGTAAAACTAAGGTAAAAATTTCCATATGATTGCCAGGCATCCGTCTGTTTTTCACCTCATAGTTCACATACCGTAAGAGATCCATTTTGTGTGCTGGGTGAGTTGCTGCTCTGCTCCCCATGGGCTTGCGTACTTCCGTAGAGTGTCAGGTCATGCTCACCGGTCTGGCCGGCATAGTCTTGAGTGTGTGGCACCCCATATTCTGTGGGAATTCCATTCTGCGGAGGTGGTGGAAATGGGATGGTAGTAAAAGGCTGAACCATCGCGTCAGGAGTTGTTGTTGGCTCCTGGTTACCCTAAAACAAACAAT----GAGAAAA-----ACAAAAAGTGACT--CTGAATCCTTCTTACCTAACTAGTTTTAAAGTGAGTAAATGGAATTATCCGAACATTCTCTCACT i calJac3.chr1 C 0 C 0 s mm10.chr15 77132588 432 + 104043685 AGGAAAGAACAGTCAGTACATGCATGCTGGGCAGTG-AGTAGAAATGCTAAACTAACTCAAAGCGCTTTCTTTCCGAG-----AAGGTAAAAATTTC------------ACACGTCCTTCTACCTTGCATCTCCGACTTCACATACCGTGAGAGATCCATTCTGGTTGCTGGGTGAATTGCTACTCTGTTCTCCATGAGGCTGCGTACTCCCGTAGAGGGTCAGGTTATGTTCACTGGTCTGGCCGGCATAGTCCTGAGTGTGTGGCACTCCATATTCTGTGGGAATTCCATTTTGTGGAGGTGGTGGGAACGGGATGGTAGTAAAAGGCTGAACCATTGCGTCAGGAGTTGTTGTTGGCTCCTGGTTACCCTAGAGCAAGCAAC---AGAAAAGA-----AAGAGGAGTGAGTGAATAAATCTTTATCACACA-----------------------GGACTCTTAGCATGTTCTCTCACT i mm10.chr15 C 0 I 246 s canFam3.chr10 40897867 471 - 69331447 AAATGAAATTAC-------ATAAATGCTATGCAGTGTCATGTAGATGCTAAATTAATTCAAAGGGTTTTCTGGTCTGATGATTCAGCTGAAGATTTGAGTATGA-TGACAAGCACTCTTCCATTCCCCACCTCAGAGTTCACATACCGTGAGAGATCCGTTTTGTGTGCTGGGTGAGTTGCTACTCTGCTCCCCGTGGGCTTGCGTACTTCCGTAGAGTGTCAGGTTATGCTCACTGGTCTGGCCGGCATAGTCCTGAGTGTGTGGCACTCCATATTCTGTGGGAATTCCATTCTGTGGAGGTGGTGGAAACGGGATGGTAGTAAAAGGCTGAACCATTGCGTCAGGAGTTGTTGTTGGCTCCTGGTTACCCTAAAACAAATAACAGAAGAGAAAATAAGGAGAAAAAGTGATT--TTAAGTTCTCATTACATGACTATTTTTAAGGTGAGGATACAAAATTCTCTGAATATTCTGTCTCT i canFam3.chr10 I 159 C 0 a score=25236.000000 s hg38.chr22_KI270876v1_alt 131101 7 + 263666 GCATAGG s panTro4.chr22 34508741 7 + 49737984 GCATAGG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30925059 7 + 46535552 GCATAGG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100475859 7 - 115148730 GCATAGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80628252 7 + 95678458 GCATAGG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81054847 7 - 96509753 GCATAGG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76312537 7 + 90941950 GCATAGG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18581095 7 + 33263144 GCATAGG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198279250 7 + 210400635 GCATAgg i calJac3.chr1 C 0 I 262 s canFam3.chr10 40898338 7 - 69331447 GGTCAGG i canFam3.chr10 C 0 C 0 e mm10.chr15 77133020 246 + 104043685 I a score=463501.000000 s hg38.chr22_KI270876v1_alt 131108 207 + 263666 TAAAATGGAATGCTTATTGCTCCAGGATTGGAGAAAATATTATTACACATACACACATAGATATATGTATGTGGAC--AGacacacacacacacacacacacacacacacacacacTCACTTTTGTTAATGTGTAGTTACTAGACAGGCCCACAACCATATTTAAGTGGACTAGATGCCAAAGGGGCAAAAATCTTTCCTTTAAATTAA s panTro4.chr22 34508748 189 + 49737984 TAAAATGGAATGCTTATTGCTCCAGGATTGGGGAAAATATTATTatacatacacacatagatatatgtatgtggac--ag------------------acacacacacacacacactcacTTTTGTTAATGTGTGGTTACTAGACAGGCCCACAACCATATTTAAGTGGACTAGATGCCAAAGGGGCAAAAATCTTTCCTTTAAATTAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30925066 189 + 46535552 TAAAATGGAATGCTTATTGCCCCAGGATTGGGGAAAATATTATTATACATACACACATAGATGTATGTATGTGGAC--AG------------------AGACACACACACACACATTCACTTTTGTTAGTGTGTGGTTACTAGACAGGCCCACAACCATATTAAAGTGCCAAAGATGCCAAAGGGGCAAAAATCTTTCCTTTAAATTAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100475866 192 - 115148730 TAAAATGGAATGCTTATTGC-CCAGGATTGCGGAAAATATTATTATACATACACACATAGATGTATGTATGTGGac--ag--------------agacacacatacacacacacactcacTTTTGTTAATGTGTGGTTACTAGACAGGCCCACAACCATATTAAAGTTGACTAGATGCCAAAGGGGCAAAAATCTTTGCTTTAAATTAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80628259 184 + 95678458 TAAAATGGAACGAC-------CCAGGATTGGGGAAAATATTATTATATATACACACATAGATGTATGTATGTGGACTGAG------------------ACACACACACACACCCCTTCACTTTTGTTGATGTGTGGTTACTAGACAGGCCCACAACCATATTAAAGTGGACTAGATGCCAAAGGGTCAAAAATCTTTCCTTTAAATTAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81054854 184 - 96509753 TAAAATGGAATGAC-------CCAGGATTGGGGAAAATATTATTATATATACACACATAGATGTATGTATGTGGACTGAG------------------ACACACACACACACCCCTTCACTTTTGTTGATGTGTGGTTACTAGACAGGCCCACAACCATATTAAAGTGGACTAGATGCCAAAGGGTCAAAAATCTTTCCTTTAAATTAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76312544 184 + 90941950 TAAAATGGAATGAC-------CCAGGATTGgggaaaatattattatatatacacacatagatgtatgtatgtggactgag------------------acacacacacacaccccttcactTTTGTTGATGTGTGGTTACTAGACAGGCCCACAACCATATTAAAGTGGACTAAATGCCAAAGGGTCAAAAGTCTTTCCTTTAAATTAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18581102 182 + 33263144 TAAAATGGAATGAC-------CCAGGATTGGGGAAAATATTATTATATATACACACATAGATGTATGTATGTGGACTGAG--------------------ACACACACACACCCCTTCACTTTTGTTAATGTGTGGTTACTAGACAGGCCCACAACCATATTAAAGTGGACTAGATGCCAAAGGGTCAAAAATCTTTCCTTTAAATTAA i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40898345 175 - 69331447 TAAAATGGGAGACTTACTGCCTCACGACTGGGGAAAACATTGCCGTAT------ACAGAGATGTACACATGT------AG------------------ATACGCAAATACACCCA---ACTTTGGTTAATTTGTGGTTCTTAAAGAGGTCTGTGACCATATTAAAGTTGATTAGTTATCAAAGAGTCAAAAAT-TTTCCTTTAAACCAA i canFam3.chr10 C 0 I 4403 e mm10.chr15 77133020 246 + 104043685 I e calJac3.chr1 198279257 262 + 210400635 I a score=205344.000000 s hg38.chr22_KI270876v1_alt 131315 88 + 263666 AAGTAGGTGGAGAGCCCACTTTGGACCACAAGCCACTACAGCCTATACCACAGAGAGAGACTCTGTCCCT-AAAAAATACGAAAAAC-AA s panTro4.chr22 34508937 88 + 49737984 AAGTAGGTGGAGAGCCCACTTTGGACCACAAGCCACTACAGCCTATACCACAGAGAGAGACTCTGTCCCT-AAAAAATACGAAAAAC-AA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30925255 89 + 46535552 AAGTAGGTGGAGAGCCCACTTTGGACCACAAGCCACTACAGCCTATACAACAGACAGAGACTCTGTCCCT-AAAAAATACAAAAAACAAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100476058 89 - 115148730 AAGTAGGTGGAGAGCCCACTTTGGACCACAAGCCACTACAGCCTATACAACAGAGAGCGACTATGTCCCTaaaaaaatacaaaaaac-aa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80628443 88 + 95678458 AAGTAGGTGGAGAGCCCACTTTGGACCACAAGCCACTACAGCCTCTGCAACAGAGAGAGATCCTGTCCCT-AAAAAATACAAAAAAC-AA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81055038 88 - 96509753 AAGTAGGTGGAGAGCCCACTTTGGACCACAAGCCACTACAGCCTCTGCAACAGAGAGAGATCCTGTCCCT-aaaaaatacaaaaaac-aa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76312728 88 + 90941950 AAGTAGGTGAAGAGCCCACTTTGGACCACAAGCCACAACAGCCTctgcaacagagagagatcctgtccct-aaaaaatataaaaaac-aa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18581284 88 + 33263144 AAGTAGGTGGAGAGCCCACTTTGGACCACAAGCCACTACAGCCTCTGCAACAGAGGGAGATCCTGTCCCT-aaaaaatataaaaaac-aa i chlSab2.chr19 C 0 C 0 e mm10.chr15 77133020 246 + 104043685 I e canFam3.chr10 40898520 4403 - 69331447 I e calJac3.chr1 198279257 262 + 210400635 I a score=573176.000000 s hg38.chr22_KI270876v1_alt 131403 216 + 263666 AAAAGAAAAATCAACTAGGAGAAAATATTAGCAAAAGGTAAGAGAGATGCTGGGTTATTATCACTAGTCCCAGAGTGGGTTAACCAAGTTGACAAGACAGACACACATGTACACACaaacacacacacatcccaagagaaaaacaggcaaactgtgtatctgaacaattcattgaaaatgaaatacaaacaactaataaaaatgctcaacctcact s panTro4.chr22 34509025 216 + 49737984 AAAAGAAAAATCAACTAGGAGAAAATATTAGCAAAAGGTAAGAGAGATGCTGGGTTATTATCACTAGTCCCAGAGTGGGTTAACCAAGTTGACAAGACAGACACACATGTACACACAAACACACACacatcccaagagaaaaacaggcaaactgtgtatctgaacaattcattgaaaatgaaatacaaacaactaataaaaatgctcaacctcact i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30925344 216 + 46535552 AAAAGAAAAATGAACTAGGAGAAAATATTAGCAAAAGGTAAGAGAGATGCTGGGTTATTATCACGAGTCCCAGAGTGGGTTAACCAAGTTGACAAGACAGACACACATGTACACACaaacacacacacatcccaagagaaaaagaggcaaagtgtgtatctgaacaattcattgaaaatgaaatacaaacaactaataaaaatgctcaacctcact i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100476147 214 - 115148730 aaaagaaaaaTCAACTAGGAGAAAATATTAGCAAAAGGTAAGAGAGATGCTGGGTTATTATCACTAGTCCCAGAGTGGGTAAACCAAGTTGACAAGACAGACACACATGTATACGCaa--acacacacatcccaagagaaaaagaggcaaagtgtatatctgaacaattcattgaaaatgaaatacaaacaactaataaaaacgctcaacctcatt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80628531 216 + 95678458 AAAAGAAAAATCAACTAGGAGAAAATATTAGCAAAAGGTAAGAGAGATGCTGGGTTATTATCACTAGTCCCAGAGTGGGTTAACCAAGTTGACAAGACAGACACACATGTACACGCAAACACACACacatcccaagagaaaaagaggcaaagtgtctatctgaacaattcattgaaaatgaaatacaaacaactaataaaaatgctcaacctcacc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81055126 216 - 96509753 aaaagaaaaaTCAACTAGGAGAAAATATTAGCAAAAGGTAAGAGAGATGCTGGGTTATTATCACTAGTCCCAGAGTGGGTTAACCAAGTTGACAAGACAGACACACATGTACACGCAAACACACACATATcccaagagaaaaagaggcaaagtgtctatctgaacaattcattgaaaatgaaatacaaacaactaataaaaatgctcaacctcacc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76312816 216 + 90941950 aaaagaaaaatcaactaggagaaaatattagcaaaaggTAAGAGAGATGCTGGGTTAATATCACTAGTCTCAGAGTGGGTTAACCAAGTTGacaagacagacacacatgtacatgcaaacacacacacatcccaagagaaaaagaggcaaagTGTCTATCTGAACAATTcattgaaaatgaaatacaaacaaCTAATAAAAATGCTCAACCTCACC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18581372 216 + 33263144 aaaagaaaaaTCAACTAGGAGAAAATATTAGCAAAAGGTAAGAGAGATGCTGGGTTATTATCACTAGTCCCAGAGTGGGTTAACCAAGTTGACAAGacagacacacatgtacacgcacacacacacacatcccaagagaaaaagaggcaaactgtctatctgaacaattcactgaaaatgaaatacaaacaactaataaaaaggctcaacctcacc i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40902923 173 - 69331447 AACAGAAAAGCCAACTGGGGCAAAGAACT-GCAACAGAC-ATACATACACTGGGGTGTCATTACTAATCTAAGAGTAGGTGACACAAATTGGTAAGAAACACACA---------------ACAGA-------------AAAAAGAGGCAAAGAAT-TAACTGAATGATTCAC----AATGAAATAC--------CATCAAGATGCTCAATCTCGCT i canFam3.chr10 I 4403 C 0 e mm10.chr15 77133020 246 + 104043685 I e calJac3.chr1 198279257 262 + 210400635 I a score=1697850.000000 s hg38.chr22_KI270876v1_alt 131619 515 + 263666 aactgtcacgaaaattcacattaacatcaaagtaagtccaagtctttagtcatcaaatcagc-aaaaa----aattaagcagttttattatgatataactgtcat--atgataaacagcactta-tttatttacagtatacaatttgg-taagttttgatatatgcacttatattctcatgaaatcatcaccacaatcaagatagtcaacacatatatccaaaacccccaaaagtttccttgtgcCCC--AATAATAAACATATATTAC-TTTTGTAATAAAACCTATACAAATATATTGTTTTTAATACTAAAGAGAATGACAAAAAATATATCATCAATAAGGGGAAGCCAATATTCTGAAACACTGAATTACTGTGTTACTCTTAAGAGAATGGTAGTGACCTACCTTGAAACAAAAATTCATAACTCTCTTCCATTTAAAAGTTAAACAACTTCAAAATTCAGCTGTCTCCAATGTCCAAGAATCATTTCTACTTGGTAATAAAAACTGCTTTACACAATAGT s panTro4.chr22 34509241 512 + 49737984 aactgtcacaaaaattcacattaacatcaaagtaagtccaagtttttagtcatcaaatcagc-aaaaa----AAttaagcagttttattgtgatataactgtcat--atgataaacagcac-----ttatttacagtatacaatttgg-taagttttgatatatgcacttatattctcatgaaatcatcaccacaatcaagatagtcaacacatatatccaaaacccccaaaagtttccttgtgcCCCT-AATAATAAGCATATATTAC-TTTTGTAATAAAACCTATACAAATATATTGTTTTTAATACTAAAGAGAATGACAAAAAATATATCATCAATAAGGGGAAGCCAATATTCTGAAACACTGAATTACTGTGTTACCCTTAAGAGAATGGTAGTGACCTACCTTGAAACAAAAATTCATAACTCTCTTCCATTTAAAAGTTAAACAACTTCAAAATTCAGCTGTCTCCAATGTCCAAGAATCATTTCTACTTGGTAATAAAAACTGCTTTACATAATAGT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30925560 517 + 46535552 aactgtcacgaaaattcacattaacatcaaagtaagtccaagtttttagtcatcaaaccagcaaaaaA----AAttaagcagttttattgtgatacaactgtcat--atgataaacagcactta-tttatttacagtatacaatttgg-taagttttgatatatgcacttatagtctcatgaaatcaccaccacaatcaaggtagtcaacacatatatccaaaacccccaaaagtttccttgtgcCCCT-AATAATAAGCATATATTAC-TTCTGTAATAAAACCTATACAAATATATTGTTTTTAATATTAAAGAGAATGACAAAAAATATATCATCAATAAGGTGAAGCCAATATTCTGAAACACTGAATTACTGTGTTACCCTTAAGAGAATGGTAGTGACCTACCTCGAAACAAAAATTCATAACTCTCTTCCATTTAAAAGTTAAACAACTTCAAAATTCAGCTGTCTCCAGTGTCCAAGAACCATTTCTACTTGGTAATAAAAACTGCTTTACATAATAGT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100476361 517 - 115148730 aactgtcacgaaaattcaccttaacatcaaagtaagtccaagtttttagtcatcaaatcagc-aaaaa----aattaagcagttttattgtgatataactgtcat--atgataaacagcactta-tttatttacagtacacaatttggttaagttttgatatatgcacttacattctcatgaaatcatcaccacaatcaagatagtcaacacatatatccaaaacccccaaaagtttccttgtgcCCCT-AATAATAAGCATGTATTAT-TTTTGTAATAAAACCTATACAAATATATTGTTTTAAATATTAAAAAGAATGACAAAAAATATATCATCAATAAAGGGAAGCCAATATTCTGAAACACTGAATTACTGTGTTACCCTTAAGAGAATGGTAGTGACCTACCTCGAAACAAAAATTCATAACTCTCTTCCATTTAAAAGTTAAACAACTTCAAAATTCAGCTGTCTCCAATGTCCAAGAATCATTTCTACTTGGCAGTAAAAACTGCTTTACATAATAGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80628747 514 + 95678458 aactgtcatgaaaattcacattaatatcaaagtaagtccaagtttttagtcatcaaatcagc-aaaga----aattaagcagttttattgtgatataactgtcat--atgataagcagcaccta-tttatttatagtatacaatttgg-taagttttgaaaaatgtacttatattctcatgaaatcatcaccacaatcaagatagtcaacacatatatccaaaacccccaaaagtttccttgtgctCCT-AATAACAAGCATATATTAC-TTTTGTAATAAAACCTACACAAATGTATTGTTTTTAATATTAAAGAGAATGACAAAAAATATATCATCAATAAGGGGAAGCCAATGTTCTGAAACACTGAATTACTGTGTTACCCTTAAGAGAATGGTAGTGACCTACCTTGAAACAAAAATTCATAACTCTCTTCCATTT--AAGTTAAACAACTTCAAAATTCAGCTGTCTCCAATGTCCAAGAATCATTTCTACTTGGTAATAAAAATTGCTTTACATAATAGT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81055342 514 - 96509753 aactgtcatgaaaattcacattaatatcaaagtaagtccaagtttttagtcatcaaatcagc-aaaga----aattaagcagttttattgtgatataactgtcat--atgataagcagcaccta-tttatttatagtatacaatttgg-taagttttgaaaaatgtacttatattctcatgaaatcatcaccacaatcaagatagtcaacacatatatccaaaacccccaaaagtttccttgtgctCCT-AATAACAAGCATATATTAC-TTTTGTAATAAAACCTACACAAATGTATTGTTTTTAATATTAAAGAGAATGACAAAAAATATATCATCAATAAGGGGAAGCCAATGTTCTGAAACACTGAATTACTGTGTTACCCTTAAGAGAATGGTAGTGACCTACCTTGAAACAAAAATTCATAACTCTCTTCCATTT--AAGTTAAACAACTTCAAAATTCAGCTGTCTCCAATGTCCAAGAATCATTTCTACTTGGTAACAAAAATTGCTTTACATAATAGT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76313032 509 + 90941950 AACTGTCATGAAAATTCACATTAATATCAAAGTAAGTCCAAGTTTTTAGTCATCAAATTAGC-AAAGA----AATTAAGCAGTTTTATTGTGATATAACTGTCAT--ATGATAA-----ACCTA-TTTATTTATAGTATACAATTTGg-taagttttgaaaaatgtacttATATTCTCatgaaatcatcaccacaatcaagatagtcAACACATATATCCAAAATCCCCAAAAGTTTCCTTGTGCTCCT-AATAACAAGcatatattac-ttttgtaataaaacctacacaaatgtattgtttttaatattaaagagAATGACAAAAAATATATCATCAATAAGGGGAAGCCAATGTTCTGAAACACTGAATTACTGTGTTACCCTTAAGAGAATGGTAGTGACCTACCTCGAAACAAAAATTCGTAACTCTCTTCCACTT--AAGTTAAACAACTTCAAAATTCAGCTGTCTCCAATGTCCAAGAATCATTTCTACTCGGTAATAAAAACTGCTTTACATAATAGt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18581588 514 + 33263144 aaatgtcatgaaaattcacattaatatcaaagtaagtccaagtttttagtcatcaaatcagc-aaaga----aattaagcagttttattgtgatataactgtcat--atgataaacagcaccta-tttatttatagtatacaatttgg-taagttttgaaaaatgtacttatattctcatgaaatcatcaccacaatcaagatagtcaacacatatatccaaaacccccaaaagtttccttgtgctCCT-AATAACAAGCATATATTAC-TTTTGTAATAAAACCTACACAAATGTATTGTTTTTAATATTAAAGAGAATGACAAAAAATATACCATCAATAAGGGGAAGCCAATGTTCTGAAACACTGAATGACTGTGGTACCCTTAAGAGAATGGTAGTGACCTACCTCGAAACAAAAATTCATACTTCTCTTCCATTT--AAGTTAAACAACTTCAAAATTCAGCTGTCTCCAATGTCCAAGAATCATTTCTACTTGGTAATAAAAACTGCTTTACATAATAGT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198279519 503 + 210400635 aactgtctcaaaaaaaCA---------GGAAGTAAGTCCAAGT-TTTAGTCATCAAATCAGCAAAAAA----AAttaagcagttttattgtgatataaccgtcaa--ataataaacagcactta-tttgtttacattatacaatttgg-taagttttgatatacgcacttatattctcataaaatcat---cacaatcaagatagtcaacacatatatccaaaacccccaaaagtttccttgtgcCCCTCAATAATAAGTGTGTATTAC-TTCTGTAATAAAACCTACGC-AATATATTGTTTTTACTATTAAAGAGAATGACAAAAAA-ATATATTCAATAAAGGGAATCCAATATTCTGAAACACTGAATTACTGTGTTACCCTTAAGAGAATGGTAATGATCTACCTAGAAACGAAAATTCATAACTCTCTTCCATTGAAAAGTTAAAAAACTTCAAAACACAGCTATCTCCACTGTTCAAGAATCATTTCTACTTGGTAATAAAAACTGCTTTATCTAAAACT i calJac3.chr1 I 262 C 0 s canFam3.chr10 40903096 493 - 69331447 AAC--ATACGGAAACAGATATTAACAGCAAAACATGTCCAATTTTTTAGTCATCTAATCAAT-AAAAATTttttttaa--agttttattgaggtatcattgacatacacaacaaactgcatctactttatgtatagt----------g-taagcttcgacatatatacatgtacatttgtgaaatcaccaccacaaac----tagtgagcagatctgcttcaaatccccaaaagtttcctcatgttcct-AAGAAGAAACAAGTATTACTTTTTGTAGTATAGCCTAT-CAAGTA---TTTTTTTAATATAAAAGAG-ATGACAAGAAAGATGTAATCAATAAGAGGAAGCTGATATGCCGCAGCACTGAATTATT-TGATA---TCAAGAAAATGGCAGTG----ACATTGAGAAAAAAATTCATAACTGTTTTTCATTTTCAAGTTACCCAGCATCAAAATTCATCTGTCTCCAGTGTCCAAGAATCATTTCTAAGTGGTATTAAGGATTGCTTTACATAAAAAT i canFam3.chr10 C 0 I 172 e mm10.chr15 77133020 246 + 104043685 I a score=3220967.000000 s hg38.chr22_KI270876v1_alt 132134 1129 + 263666 GGTGAAAGAAAAAAGGCAGAGAATTGGGGGTGGGGGGCTGCCACAGTCTAGAT-AAAAAGTGATGAACTGATTACAGTTATCAGTGGGAAGGGGCAGAgtcatagactgagttgtgctcagtctccaacccgtatgttgaagttctaaccctcagtacctcaaaatgtcactgtttttaaagataaggtctttaaaaaggtaa-----ttaaagtgatgtcatgagggtgggccttaatccaattggagtggtgtccttataagaaaagggaatgtggatacagacacatacagagggaggcccatgtgaagacacagag----catgaccatctacaagccaac----aaaaaagacatcagaagaaaccaaccctgctgacaccctgatcttgcacttctagcctccag-aatggtaagaaaatacattgctatattgttatgtaatactttcttatggcagcccttgcaaactGGTAAAGGCAGGAATGAAGATTCTGTAACAGAAATTAATAATAAAAATAAAAATAAATTGCTTTACATAAAAATTTTCCTGCTATTggacataatggttcatgcccttgtaatcccagcactttgggaggctgagatgggaggactgcctgcggctaggagttcaagatcagcctggccaacacaaagagaccctgtctctagaaaaactttaaaaaattagctgggcatggtgg-tatg----tgtagtcccagctacttgtgaggctgagaaaggaggactgcttgagcccaggagctggaggctgcagtgagccatgattgcatcac-----cctagcctgggcaacagaaagaccacgtctcttaaggga----------------------------aaaaaaaaaaaaaaaaaggctgggtgtggtggctcac----ttctgtaatcccagcaccttgtgaggctgaggcgggcagatcacttgaggtcaggagttcaataccagcctggccaacatggtgaaactccatccctattaaaaatacaaaaattagccaagcatggtgccaaatgcctttaatctcagatatcttggaagctgaggcaggagaatcgcttgaactcaggagga-ggacatt------------------gcagtgaactgaca----tcgctgccattaaactctagcccgggcaacagagtgagtgagact--ccatctc s panTro4.chr22 34509753 1128 + 49737984 GGTGAAAGAAAAAAGGCAGAGAATTGGGGGTGGGGGGCTGCCACAGTCTAGAT-AAAAAGTGATGAACTGATTACAGTTATCAGTGGGAAGGGGCAGAgtcatagactgagttgtgctcagtctccaacccgtatgttgaagttctaaccctcagtacctcaaaatgtcactgtttttaaagataaggtctttaaaaaggtaa-----ttaaagtgatgtcatgagggtgggccttaatccaattggagtggtgtccttataagaaaagggaatgtggatacagacacatacagagggaggcccatgtgaagacacagag----catgaccatctacaagccaac----aaaaaagacatcagaagacaccaaccctgctgacaccctgatcttgcacttctagcctccag-aatggtaagaaaatacatttctatattgttatgtaatactttgttatggcagcccttgcaaactagtaAAGGCAGGAATGAAGATTCTGTAACAGaaattaataataaaaataaaaataaattGCTTTACGTAAAAATTTTCCTGCTATTggacataatggttcatgcccttgtaatcccagcactttgggaggctgagatgggaggactgcctgcggctaggagttcaagatcagcctggccaacacaaagagaccctgtctctagaaaaacttttaaaaattagctgggcatggtgg-tatg----tgtagtcccagctacttgtgaggctgagaaaggaggactgcttgagcccaggagctggaggctgcagtgagccatgattgcatcac-----tctagcctgggcaacagaaagaccatgtctcttaaggg-----------------------------gaaaaaaaaaaaaaaaaggctgggtgtggtggctcac----ttctgtaatcccagcaccttgtgaggctgaggcgggcagatcacttgaggtcaggagttcaataccagcctggccaacatggtgaaactccatccctattaaaaatacaaaaattagccaagcatggtgccaaatgcctttaatcccagataccttggaagctgaggcaggagaatcgcttgacctcaggagga-ggacatt------------------gcagtgaactgaca----tcgctgccattgcactctagcccgggcaacagagtgagtgagact--ccatctc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30926077 1136 + 46535552 GGTGAAAGAAAAAAGGCAGAGAATTGGGGGTGGGGGGCTGCCACAGTCTATAT-AAAAAGTGATGAACTGATTACAGTTATCAGTGGGAAGGGGCAGAGTC--Aggctgagttgtgctcc-tccccaacccacatgttgaagttctaaccctcagtacctcaaaatgtcactgtttttaaagatagggtctttaaaaaggtaattaagttaaagtgatgtcctgagggtgggccttaatccaattggagtggtgtccttataagaaaagggaatgtggatacagacacatacagagggaggcccacgtgaaaacacagag----catgaccatctacaagccaac----aaaaaagacatcagaagaaaccaaccctgctgacaccctgatcttgcacttctagcctccag-aatggtgagaaaatacattgctatattgttatgtaatactttgttatggcagcccttgcaaactagtaAAGACAGGAATGAAGATTCTGTAACAGaaattaataataaaaataaaaataaattGCTTTACGTAAAAATTTTCCTGCTATTggacataatggttcatgtccttgtaatcccagcactttgggaggctaagatgggaggactgcctatggctaggagttcaagatcagcctggccaacacaaagagatcccgtctctagaaaaactttaaaaaattagctgcgcatggtgg-tatg----tgtagtcccagctacttgtgaggctgagaaacgaggattgcttgagcccaggagctggaggctgcagtgagccatgattgcaccac-----tctagcctgggcaacagaaagaccctgtctcttaag-------------------------------gaaaaaaaaaaaaaaaaTgctgggtgtggtggctcacgtctgtctgtaatcccagcaccttgtgaggctgaggcgggtggatcacctgaggtcaggagttcagtaccagcctggccaacatggtgaaactccatctctattaaaaatacaaaaattagccaagcatggtgccaaatgcctttaatcccagatacctgggaggctgaagcaggagaatcaattgaactcaggagaa-ggacatt------------------gcagtgaactgacggcactcgctgccattgcactctagcccggtcaacagagtgagtgagact--ccatctc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100476878 1127 - 115148730 GGTGAAAGAAAAAAGGCAGACAATTAGGGGTGGGGGGCTGCCACAGCCTAGATAAAAAAGTGATGAACTGATTACAGTTATCAGTGGGAAGGGGCAGAgtcataggttgagttgtgctcc-tccccaacccatatgttgaagttctaaccctcagtacctcaaaatgtcactgtttttaaagatagggtctttaaaaaggtaattaagttaaaatgacgtcatgagggtgggtcttaatccaattggagtggtgtccttacaagaaaagggaatgtcgatatagacacatacagagggaggcccacgtgaaggcacagag----catgaccatctacaagccact----aaaaaagacatcagaagaaaccaaccctgctgacaccctgatctcgcacttctagcctccagaaatggtgagaaaatacatttctatattgttatgtaatactttgttatggcagcccttgcaaactagtaAAGGCAGGAATGAAGATTCTGTAACAGAAGTTAATAATAAAAATAAAAATAAATTGCTTTACATAAAAATTTTCCTGCTATTggacataatggttcatgcccttgtaatcccagcactttgggaggctaagacgggaggactgcctgtggctaggagttcaagatcagcctggccaacacagagagaccccgtctctagaaaaactttaaaaaattagctgggcatggtggttatg----tgtagttccagctacttgtgaggctgagaaaggaggattgcttgagcccaggagctggaggctgcagtgagccatgattgcaccac-----tctagcctgggcaacagaaagacgctgtcttttaag---------------------------------aaaaaaaaaaaaaaaggctgggtgtggtggctcat----gtctgtaatcccagcaccttgtgaggctgaggaaggcggatcacttgaggtcaggagttcaataccagcctggccaacatggtgaaactccatctctattaaaaatacaaaaattagccaagcatggtgccaaatgcctttaatcccagatacttgggaggctgaggcaggaaaatcgcttgaactcaggagga-ggacatt------------------gcagtgaactgaca----tctctgccattgcactctagcccaggcaaca----gagtgagact--ccatctc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80629261 1129 + 95678458 GGTGAAAGAAAAA----AGAGAATTGGGGATGGGGGACTGCCACAGTCTAGAT-AAAAAGTGAGGAACTGATTACAGTTATCAGTGGGAAGGGGCAGAgtcataggctgagttgtgctcc-tccccaacccatatgttgaagttctaacccgcactacctcaaaatgtcactgtttttaaagatagggtctttaaaaaggtaattaagttaaagtgatgtcatgaggatgggccttaatccaaatgcagtggtgtccttataagaaaagggaatgtggatacagacacatacagagggaggcccacgtgaagacacagagagaccatgaccatctacaggctaactaatgaaaaagacatcagaagaaactaacctagctgacactctgatcttgcacttctagcctcccg-aatggtgagaaaatacatttctatattgttatgtaatattttgttatggcagcccttgcaaactagtaAAGGCAGGAATGAAGATTCTGTAACAGaaattaaaaataaaaattaaa--aaattGCTTTACATAAAAATTTTCCTGCTATTggacataatggttcatgccc-tgtaaacccagcactttgggaggctaagatgggaggactgcctgtggctaggagttcaagatcagcctggccaacacggagagacaccatttct----aaactttaaaaaattagctgggcatggtgg-tatgtgcctgtagtcccaacttcttgtaaggctgagaaaggaggattgcttgagcccaggagctggaggctgcagtgagccatgattgcaccat-----tctagcttgggcaacagaaagatcctgtctcttaaaaaaag--------------------------gaaaaaaaaaaaaaaaaggctgggtgcggtggctcac----gtctgtaatcccagcaccttgtgaggctgaggcgggcggatcacttgaggtcaggagttcaataccagcctggccaacatggtgaaactccatctctattaaaaacataaaaattagccaaggatggtgccaaatgcctttaatcccagatacctgagacgctgaggcaggagaatcgcttgaactcaggaaga-gg-------------------------agtgaactgaca----tcactaccactgcactctagcccaggcgacaaagtgagtgagact--ccatctc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81055856 1129 - 96509753 GGTGAAAGAAAAA----AGAGAATTGGGGATGGGGGACTGCCACAGTCTAGAT-AAAAAGTGAGGAACTGATTACAGTTATCAGTGGGAAGGGGCAGAgtcataggctgagttgtgctcc-tccccaacccatatgttgaagttctaacccgcagtacctcaaaatgtcactgtttttaaagatagggtctttaaaaaggtaattaagttaaagtgatgtcatgaggatgggccttaatccaaatgcagtggtgtccttataagaaaagggaatgtggatacagacacatacagagggaggcccacatgaagacacagagagaccatgaccatctacaggctaactaatgaaaaagacatcagaagaaactaacctagctgacactctgatcttgcacttctagccccccg-aatggtgagaaaatacatttctatattgttatgtaatattttgttatggcagcccttgcaaactagtaAAGGCAGGAATGAAGATTCTGTAACAGAAATTAAAAATAAAAATTAAA--AAATTGCTTTACATAAAAATTTTCCTGCTATTggacataatggttcgtgccc-tgtaaacccagcactttgggaggctaagatgggaggactgcctgtggctaggagttcaagatcagcctggccaacacggagagacaccatttct----aaactttaaaaaattagctgggcatggtgg-tatgtgcctgtagtcccaacttcttgtaaggctgagaaaggaggattgcttgagcccaggagctggaggctgcagtgagccatgattgcaccat-----tctagcttgggcaacagaaagatcctgtctcttaagaaaag--------------------------gaaaaaaaaaaaaaaaaggctgggtgcggtggctcat----gtctgtaatcccagcaccttgtgaggctgaggcgggcggatcacttgaggtcaggagttcaataccagcctggccaacatggtgaaactccatctctattaaaaacataaaaattagccaaggatggtgccaaatgcctttaatcccagatacctgagacgctgaggcaggagaatcgcttgaactcaggaaga-gg-------------------------agtgaactgaca----tcactaccactgcactctagcccaggcgacaaagtgagtgagact--ccatctc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76313541 1155 + 90941950 ggtgaaagaaaaa----agagaattggGGATGGGGGACTGCCACAGTCTAGAT-AAAAAGTGAGGAACTGATTACAGTTATCAGTGGGAAGGGGCAGAGTCATAGGCTGAGTTGTGCTCC-TCCCCAAcccatatgttgaagttctaaccctcagtacctcaaaatgtcactgtttttaaagatagggtctttaaaaaggtaattaagttaaagtgATGTCATGAGGATGGGCCTTAATCCAAATGGAGtgctgtccttataagaaaagggaATGTGGatacagacacatacagaggGAGGCCcacgtgaagacacagagagaccATGACCATCTACAGGCTAACTAATGAAAAAGACATCAGAAGAAACTAACCTAGCTGACACCCTGATCTTGCACTTCTAGCCTCCCG-AAtggtgagaaaatacatttctatattgttatgtaatattttgttatggcagcccttgCAAACTAGTAAAGGCAGGAATGAAGATTCtgtaacagaaattaaaaataaaaataaaa--aaattgcttTACATAAAAATTTTCCTGCTATTGGACATAATGGTtcatgccc-tgtaatcccagcactttgggaggctaagatgggaggactgcctgtggctaggagttcaagatcagcctggccaacacggagagaCACCatttct----aaactttaaaaaattagctgggcatggtgg-tatgtgcctgtagtcccagcttcttgtaaggctgagaaaggaggattgcttgagcccaggagctggaggctgcagtgagccatgattgcaccat-----tctagcttgggcaacagaaagatcctgtctcttaagaaaggtaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaggctgggtgcggtggctcac----gtctgtaatcccagcaccttgtgaggctgaggcgggcggatcacttgaggtcaggagttcaataccagcctggccaacatggtgaaactccatctctattaaaaacataaaaattagccaaggatgGTGCCAaatgcctttaatcccagatacctgagaggctgaggcaggagaatcgcttgaactcaggaaga-gG-------------------------AGTGAACTGACA----TCactaccactgcactctagcccaggcgacaaagtgagtgagact--ccatctc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18582102 1118 + 33263144 GGTGAAAGAAAAA----AGAGAATTGGGGAT-GGGGACTGCCACAGTCTAGAT-AAAAAGTCAGGAACTGATCACAGTTATCAGTGGGAAGGGGCAGAGTC--Aggctgagttgtgctcc-tccccaacccatatgttgaagttctaaccctcagtacctcaaaatgtcactgtttttaaagatagggtctttaaaaaggtaattaagttaaagtgatgtcatgagggtgggccttaatccaaatggagtggtgtccttataagaaaagggaatgtggatacagacacatacagagggaggcccacgtgaagacacagagagaccatgaccatctacaggctaactaatgaaaaagacatcagaagaaactaacctagctgacaccctgatcttgcacttctagcctcccg-aatggtgagaaaatacatttctgtattgttatgtaatattttgttatggcagcccttgcaaactagtaAAGGCAGGAATGAAGATTCTGTAACAGAAATTAAAAATAAAA---AAA--AAATTGCTTTACATAAAAATTTTCCTGCTATTggacataatggttcatgccc-tgtaatcccagcactttgggaggctaagatgggaggactgcctgtggctaggagttcaagatcagcctggccaacacggagagacaccatttct----aaactttaaaaaattagctgggcatggtgg-tatgtgcctgtagtcccagcttcttgtgaggctgagaaaggaggattgcttgagcccaggagctggaggctgcagtgagccatgattacaccat-----tctagcttgggcaacagaaagatcctgtctcttaagaaaag-------------------------------gaaaaaaaaaaaggctgggtgcagtggctcac----gtctgtaatcccagcaccttgtgaggctgaggcgggcagatcacttgaggtcaggagttcaatatcagcctggccaacatggtgaaactccatctctattaaaaacataaaaattagccaaggatggtgccaaatgcctttaatcccagatacctgagaggctgaagcaggagaatcgcttgaactcaggaaga-gg-------------------------agtgaactgaca----tcactaccactgcactctagcccaggcgacagagtgagtgagact--ccatctc i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198280022 1123 + 210400635 GATGAAAGAAAAAAGGCAGAGAATTGGGGATGGGGGACTGCAATAGTCTAGAT-AAAAAGTGATGAACTGATTACAGTTATTAGTAGGAGGGGACAGAgtcataagctgagttgtgctcc-tccccaactcatatgttgaggttttaaccctcactatctcaaaatgtcattgtttttatagacagggtctttaaaaaggtaattaagttaaagtgatgtcatgagggtgggccttaatccaactggagtggtgtcctcataagaaaagggaatgtggatgcagacacatacaatagaaggcccacatgaagacacagag----catggccatctacaagccaat----gaaaaagacattagaa---accaaccctgtttacaccctgatcttgcacttctagcctccag-aatggtaagaaaatacgtttctatattgttatgtaatactttgttatggaagcccttgcaaattaGT---GGCAGGAATGGAGATTCTGTAACA-----CAGAAATAAAAATTTAAA-AAATTGCTTTACATAAAAATGTTCCTGCTATTggacataatgactcatatcc-tgtaatcccagcactttgggaggctgagatggaaagactgcctgtggccaggagttcacaaccagcctgggcaacgcagagtgaccctgtctctagaaaaactttaaaaaattagctgggcatggtgg-caagtgtctatactcccagctacttgtgaggctgaggcaggaggattgcttcagcccaaaagctggaggccgcattgagccatgattggaccactgcattctagcctggacaacagaaagaccctgtctcTTAAG-------------------------------------GAAAGAATAAAGGCTGG------------------gtctataatttcagcaccttctgaggccgaggtgggcggatcacttgaggtcaggagctcaataccagcctggccaacatggtgaaactccatctctattaaaaatataaaaattagccaagcatggagggaaatgcctttaatcccaggtacttgggaggctaaggcaggagaatcgcttgaactcaggaggactgacattttgcagtcctctgcaaacgcagtgatctgaca----ttgctgccactgtactcaagcccaggcaaca----gagtaagactagccatctc i calJac3.chr1 C 0 C 0 e mm10.chr15 77133020 246 + 104043685 I e canFam3.chr10 40903589 172 - 69331447 I a score=27250.000000 s hg38.chr22_KI270876v1_alt 133263 18 + 263666 aaaagatagaaaaaaaaa s panTro4.chr22 34510881 18 + 49737984 aaaagatagaaaaaaaaa i panTro4.chr22 C 0 I 296 s ponAbe2.chr22 30927213 18 + 46535552 aaaagataggggaaaaaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100478005 18 - 115148730 aaaagatagaaaaaaaaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80630390 14 + 95678458 aaaaaatag-aaaaa--- i rheMac3.chr10 C 0 I 2 s macFas5.chr10 81056985 14 - 96509753 aaaaaatag-aaaac--- i macFas5.chr10 C 0 I 2 s papAnu2.chr10 76314696 15 + 90941950 aaaaaatagaaaaaa--- i papAnu2.chr10 C 0 I 2 s chlSab2.chr19 18583220 15 + 33263144 aaaaaataggaaaaa--- i chlSab2.chr19 C 0 I 2 s calJac3.chr1 198281145 18 + 210400635 aaaaaacagcagaaaaaa i calJac3.chr1 C 0 C 0 s canFam3.chr10 40903761 18 - 69331447 aaaatcttaaaaaaaaaG i canFam3.chr10 I 172 C 0 e mm10.chr15 77133020 246 + 104043685 I a score=-4193.000000 s hg38.chr22_KI270876v1_alt 133281 4 + 263666 --aaaa s ponAbe2.chr22 30927231 2 + 46535552 --aa-- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100478023 1 - 115148730 ---a-- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80630406 2 + 95678458 --aa-- i rheMac3.chr10 I 2 C 0 s macFas5.chr10 81057001 2 - 96509753 --aa-- i macFas5.chr10 I 2 C 0 s papAnu2.chr10 76314713 2 + 90941950 --aa-- i papAnu2.chr10 I 2 C 0 s chlSab2.chr19 18583237 2 + 33263144 --aa-- i chlSab2.chr19 I 2 C 0 s calJac3.chr1 198281163 1 + 210400635 ---a-- i calJac3.chr1 C 0 I 2 s canFam3.chr10 40903779 4 - 69331447 AAAA-- i canFam3.chr10 C 0 C 0 e mm10.chr15 77133020 246 + 104043685 I e panTro4.chr22 34510899 296 + 49737984 I a score=602913.000000 s hg38.chr22_KI270876v1_alt 133285 181 + 263666 ---CCCCTCTCTTTAGTTCTTAGAAAATATGTTATGAAAACTTT-----------------AAATTTTTT---------------TGGAAAAAGTC-TATCTTCGTCACCCATCACCATATAACTTCTTTACGTTATTTCTAGGTTAGGATAGTTTTTATGATGTCTTTATAGCTATTCTGGGCATCTGACGAGAGATATAAAATAGTTATCTCCCT s panTro4.chr22 15226826 180 - 49737984 ---CCCCTCTCTTTAGTTCTTAGAAAATATGCTATGAAAACTTT-----------------AAATTTTTT---------------TGGAAAAAGTC-TATCTTTGTCACCCATCACCATATAACTTCTT-ACGTTATTTCTAGGTTAGGATAGTTTTTATGATGTCTTTATAGCTATTCTGGGCATCTGACGAGAGATATAAAATAGTTATCTCCCT i panTro4.chr22 n 296 C 0 s ponAbe2.chr22 30927233 180 + 46535552 -----CCCCTCTTTAGTTCTTAGAAAATATGCTACGAAAACTTT-----------------AAATTTTTT---------------TGGAAAAAGTCTTATCTTTGTCACCCATCACTATATAACTTCTTTACATTATTTCTAGGTTAGGATAGTTTTTATGATGTCTTTATAGCTATTCTGGGCATCTGACGAAAGATATAAAATAGTTATCTCCCT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100478024 181 - 115148730 ---TCCCTCTCTTTAGTTCTTAGAAAATATGCTATGAAAACTTT-----------------AAATTTTTT---------------TGGAAAAAGTC-TATCTTTGTCACCCATCACTATATAACTTCTTTTCATTATTTCTAGGTTAGGATAGTTTTTATGATGTCTTTATGGCTATTCTGGGCATCTGATGAGAGATATAAAATAGTTATCTCCCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80630408 181 + 95678458 ---TCCCTCTCTTTAGTTCTTAGAAAATATGCTATGAAAACTTT-----------------AAATTTTTT---------------TGGAAAAAGTC-TATCTTTGTCACCCATCACTATATAACTTCTTTTCATTATTTCTAGGTTAGGATAGTTTTTATGATGTCTTTATAGCTATTCCGGGCATCTGAAGAGAGATACAAAATAGTTATCTCCCT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81057003 181 - 96509753 ---TCCCTCTCTTTAGTTCTTAGAAAATATGCTATGAAAACTTT-----------------AAATTTTTT---------------TGGAAAAAGTC-TATCTTTGTCACCCATCACTATATAACTTCTTTTCATTATTTCTAGGTTAGGATAGTTTTTATGATGTCTTTATAGCTATTCCGGGCATCTGAAGAGAGATACAAAATAGTTATCTCCCT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76314715 179 + 90941950 ---tccctctcttTAGTTCTTAGAAAATATGCtatgaaaac--t-----------------aaatttttt---------------tggaaaaagtc-TATCTTTGTCACCCATCACTGTAtaacttcttttcattatttctagGTTAGGATAGTTTTTATGATGTCTTTATAGCTATTCCGGGCATCTGAAGAGAGATACAAAATAGTTATCTCCCT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18583239 181 + 33263144 ---TCCCTCTCTTTAGTTCTTAGAAAACATGCTATGAAAACTTT-----------------AAATTTTTT---------------TGGAAAAAGTC-TATCTTTGTCATCCATCACTATATAACTTCTTTTCATTATTTCTAGGTTAGGATAGTTTTTATGATGTCTTTATAGCTATTCCGGGCATCTGAAGAGAGATACAAAATAGTTATCTCCCT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198281166 196 + 210400635 ---TCTCTCTCTTTAGTTCCTAGACAATGTGCTATGAAAACGTTAAATTTTTGAGCCCATAAAATTTTTT---------------TGGAAAAAGTC---TCTTTGTCACCCATCACTATATAACTTCTTTTCATTATTTCTAGGTTGGGGTAGTATATATGATTTCTTTTTAGCTATTCTGGGCATCTGAAGAGAGATATAAAATAGTCATCACCCT i calJac3.chr1 I 2 C 0 s canFam3.chr10 40903783 195 - 69331447 TTTTCCCTTTGTTTAGTTTTTAGAAATTAGGCTATGAAAACCTT-----------------ACACTTTTTGCCTTTAATTTTTCAGGGAAAAGGTC-TATCTTTGTTACCCATCACTATGTAAGTTCTT---ATGATCTCCAAGCTGGGGTACTGTATATGACTTCTCCTTAGTTATCCTGGGTGTCCTA-GAGAGAAATGAAATAACCCTCTATCT i canFam3.chr10 C 0 C 0 e mm10.chr15 77133020 246 + 104043685 I a score=237797.000000 s hg38.chr22_KI270876v1_alt 133466 72 + 263666 TCCCCTTCAAATTATTCAATGctctatctctctgtctctct--ctAGCCATATG-----------AAACATACTGCTTCAGAAGC s panTro4.chr22 15227006 72 - 49737984 TCCCCTTCAAATTATTCAATGCTCTATCTCTCTGTATCTCT--CTAGCCATATG-----------AAACATACTGCTTCAGAAGC i panTro4.chr22 C 0 n 0 s ponAbe2.chr22 30927413 72 + 46535552 TCCCCTTCAAATTATTCAATGCTCTATCTCTCTGTATCTCT--CTAGCCATATG-----------AAACATACTGCTTCAGAAGC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100478205 72 - 115148730 TCTCCTTCAAATTATTCAATGCTCTATCTCTCTGTATCTAT--CTAGCCATATG-----------AAACATACTGCTTCAGAAGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80630589 69 + 95678458 T---CTTCAAATTATTCAATGCTCTATCTCTCTGTATCTAT--CTAGCCATATG-----------AAACATACTGCTTCAGAAGC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81057184 69 - 96509753 T---CTTCAAATTATTCAATGCTCTATCTCTCTGTATCTGT--CTAGCCATATG-----------AAACATACTGCTTCAGAAGC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76314894 69 + 90941950 T---CTTCAAATTATTCAATGCTCTATCTCTCTGTATCTAT--CTAGCCATATG-----------AAACATACTGCTTCAGAAGC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18583420 69 + 33263144 T---CTTCAAATTATTCAATGCTCTATCTCTCTGTATCTAT--CTAGCCATATG-----------AAACATACTGCTTCAGAAGC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198281362 71 + 210400635 TCTCCTTCAAATTA-TCAATCCTCTGTCTCTCTGTATCTAT--TTAGCCATATG-----------AAACATACTGCTTCAAAAGC i calJac3.chr1 C 0 C 0 s mm10.chr15 77133266 68 + 104043685 TCTCTTCCAAATCATTTGGTGCTCTG----CCTGTACCCATAGTTGGTGGCA-------------GAATATACTGCTTCCAAGGT i mm10.chr15 I 246 C 0 s canFam3.chr10 40903978 80 - 69331447 ---TCTTCAAGTTACACAAAGCTGTATCCATATCTACCTCC--CTGCCCGCCTGCCCACTGCATCAAACACATGGCTTCTGAAGC i canFam3.chr10 C 0 C 0 a score=588495.000000 s hg38.chr22_KI270876v1_alt 133538 225 + 263666 CCTCGCTGAATCTACTGGCCTGAAGACAGACATGAAAAAGAATTGAATTGGAATTCAGGTGGACTGGTGAATG-AAACACAATAAGAGCACCAAAGGTCTTATGCCCACATCAGGCATAAATATAATCTCACAGGAATCCATAAGAAAGTTCTACTAAATAATTGGTAAAAGCTAAAAGATAGAGTTTTCAAGTTAGGATTAACA----------AGGCCAAGGCGACTTTCTCCT---- s ponAbe2.chr22 30927485 223 + 46535552 CCTCGCTGAATCTACTGGCCTGAAGACAGACATAAAAAAGAACTGAATTGGAATTCAGGTGGATTGGTGAATG-AAACACAATAAGAGCACCAAAGGTCTTAGGCCCACATCAGGCATAAATATAATCTTACAGGAATCCATAAGAAAGTTCTACTAAATAATTGGTAAAAGCTAAAAGACAG--TTTTCAAGTTAGGATTAACA----------AGGCCAAGGGGACTTTCTCCT---- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100478277 235 - 115148730 CCTCGCTGAATCTACTGGCCTGAAGATAGACATGAAAAAGAAATGAATTGGAATTCAGGTGGATTGGTGAATG-AAACACAATAAACGCACCAAAGGTCTTATGCCCACATCAGGCATAAGTATAATCTTACAGGAATCCATAAGAAAGTTCTACTAAATAATTGGTAAAGGCTAAAAGACACAGTTTTCAAGTTAGGATTAACAAGGCCAAGGGAGGCCAAGGGGACTTTCTCCT---- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80630658 225 + 95678458 CCTCGCTGGATCTACTGGCCTGAAGACAGATATGAAAAAGAAGTGAATTAGAATTCAGGTGGATTGGTGAATG-AAACACAGTAAGAGCACCAAAGGTCTTATGCCCACATCAGGCATAAATATAATCTTACAGGAATCCACAAAAAAGTTCTACTAAATAACTGGTAAAGGCTAAAAGACACCATTTTCAAGTTAGGATTAACA----------AGTCCAAGGGGACTTTCTCTT---- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81057253 225 - 96509753 CCTCGCTGGATCTACTGGCCTGAAGACAGATATGAAAAAGAAGTGAATTGGAATTCAGGTGGATTGGTGAATG-AAACACAGTAAGAGCACCAAAGGTCTTATGCCCACATCAGGCATAAATATAATCTTACAGGAATCCACAAAAAAGTTCTACTAAATAACTGGTAAAGGCTAAAAGACACCATTTTCAAGTTAGGATTAACA----------AGTCCAAGGGGACTTTCTCTT---- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76314963 225 + 90941950 CCTCGCTGGATCTACTGGCCTGAAGACAGATATGAAAAAGAAGTGAATTGGAATTCAGGTGGATTGGTGAATG-AAACACAGTAAGAGCACCAAAGGTCTTATGCCCACATCAGGCATAAATATAATCTTACAGGAATCCACAAAAAAGTTCTACTAAATAACTGGTAAAGGCTAAAAGATACAATTTTCAAGTTAGGATTAACA----------AGTCCAAGGGGACTTTCTCTT---- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18583489 226 + 33263144 CCTCGCTGGATCTACTGGCCTGAAGACAGATATGAAAAAGTAGTGAATTGGAATTCAGGTGGATTGGTGAACGAAAACACAGTAAGAGCACCAAAGGTCTTATGCCCACATCAGGCATAAATATAATCTTACAGGAATCCACAAAAAAGTTCTACTAAATTACTGGTAAAGGCTAAAAGACACAATTTTCAAGTTAGGATTAACA----------AGTCCAAGGGGACTTTCTCTT---- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198281433 222 + 210400635 CCTCACTGGATGTACCAGCCTGAAGACAGATATGAAAAATAACTCAATTGGAATTCAGGTGGACTGGTGAATG-AAACACAGTAAGAGCACCACAGGTCTTATGGCCACATCAGGCATAAATAT-ATCTTACAGGAATCCATAAGAAAGTTCTACTAAATAATTGATAAAGGCTAAAAGACATAG--TTCAAGTTAGGATTAACA----------AGGCCAAGGGGACTTTCTCGT---- i calJac3.chr1 C 0 C 0 s mm10.chr15 77133334 182 + 104043685 -----CAAGACTGATTAGCATTTAAACAGGTGTGCAACAGACAAAAATTCAAACTAAGGTAGACTAATAGATG-------------AGCA----------------------GAGCCTAAGGATTGCCTTTCAGAAATCTTCAGAAAGGGTCTATTAAGAAACATATGAAGCTTTAAAGACACAGTTTCCAAGTTTAGATTA-------------GGACCAAGGAACTTGCCTCT----- i mm10.chr15 C 0 I 1 s canFam3.chr10 40904058 211 - 69331447 CCTCACAGGACTTACT-GCCTGAAGTCAGATATGAAAGAAAA---ACTTCAAATTCAGGTGGACTGGTAAATG-CAA------GAGTTTACCA-----TCTCTCCCAACTCCAGACATAAATACAATCTTACAGT-ATACAAAATGAGGGTCTACTAAGTCATCCAT-AAGGCTAAAAGACACAGCTCCCCAGGTATGATTAACA----------CGG-CAAAGGGACTCGCTTTCCATA i canFam3.chr10 C 0 C 0 e panTro4.chr22 15227078 0 - 49737984 I a score=1076990.000000 s hg38.chr22_KI270876v1_alt 133763 296 + 263666 GCTCTGACACTGCTCCTTTCAGCCTCCTCGTTTTACTCCAGCCTCCATTCT---CCACCCCAG-CCTGCTGGGAATGAGACTCTGGCAC-ACAAGTACACAGTATGAATTCTCTCACAGCG--TTATTCTCAACAGGGCTGACTCAGATAACTGAATAAACACATCAATTAGCAGTGGGAGAT--GGGGAGAAAGGTAAAAACATTTCCTGCAATCCACTTGTAGCCTAGGCAC--TAGGCGTTTTACAGAAATGCAAGCCAGGCAGAGGC---TCTGTTTTCC--TAGAGGGGTTATGTA--CCTCCCTTAAG s panTro4.chr22 34511195 297 + 49737984 GCTCTGACACTGCTCCTTTCAGCCTCCTCGTTTTACTCCAGCCTCCATTCT---CCACCCCAG-CCTGCTGGGAATGAGACTCTGGCAC-ACAAGTACACAGTATGAATTCTCTCACAGCG--TTATTCTCAACAGGGCTGACTCAGTTAACTGAATAAACACATCAATTAGCAGTGGGAGAT--GGGGAGAAAGGTAAAAACATTTCCTGCAATCCACTTGTAGCCTAGGCAC--TAGGCGTTTTACAGAAATGCAAGCCAGGCAGAGGC---TCTGTTTTCC--TAGAGGGGTAATGTAA-CCTCCCTTAAG i panTro4.chr22 I 296 C 0 s ponAbe2.chr22 30927708 297 + 46535552 GCTCTGACACTGCTCCTCTCAGCCTCCTCGTTTTACTCCAGCCTCCATTCT---CCACCCCAG-CCTGCCGGGAATGAGACTCTGGCAC-ACAAGTACATAGTATGAATTCTCTCACAGGG--TTATTCTCAACAGGGCTGACTCAGTTAACTGAATAAACACATCAATTAGCAGCGGGAGAT--GGGGAGAAAGGTAAAAACATTTCCTGCAATCCACTTGTAGCCTAGGCAC--TAGGCGTTTTACAGAAATGCAAGCCAGGCAGAGGC---TCTGTTTTCC--TAGAGGGGTAATGTAA-CCCCCCTTAAG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100478512 297 - 115148730 GCTCTGACACTGCTCCTCTCAGCCTCCTCGTTTTACTCCAGCCTCCATTCT---CCACCCCAG-CCTGCCAGGAATGAGACTCTGGCAC-ACAAGTACACAGTATGAATTCTCCCACAGGG--GTATTCTCAACAGGGCTGACTCAGTTAACTGAATAAACACATCAATTAGCAGTGGGAGAT--GGGGAGAAAGGTAAAAACATTTCCTGCAATCCACTTGTAGCCTAGGCAC--TAGGCGTTTTACAGAAACGCAAGCCAGGCAGAGGC---TCTGTTTTCC--TAGAGGGGTAATGTAA-CCTCCCTTAAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80630883 297 + 95678458 GCTCTGACACTGCTCCTCTCAGCCTCCTCGTTTTACTCCAGCCTCCATTCT---CCACCTCAG-TCTGCTGGGAATGAGACTCTGGCAC-ACAAGTACACAGTATGAATTCTCCCACAGGG--GTATTCTCAACAGGGCTGACTCAGTCAACTGAATAAACACATCAATTCACAGTGGGAGAC--AGGGAGAAAGGTAAAAACATTTCCTGTGATCCACTTGTAGCCTAGGCAC--TAGGCGTTTTATAGAAATGCAAGCCAGACAGAGGT---ACTGTTTTCC--TAGAGGGGTAATGTAA-CCTCCGTTAAG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81057478 297 - 96509753 GCTCTGACACTGCTCCTCTCAGCCTCCTCGTTTTACTCCAGCCTCCATTCT---CCACCTCAG-TCTGCTGGGAATGAGACTCCGGCAC-ACAAGTACACAGTATGAATTCTCCCACAGGG--GTATTCTCAACAGGGCTGACTCAGTCAACTGAATAAACACATCAATTCACAGTGGGAGAC--AGGGAGAAAGGTAAAAACATTTCCTGTGATCCACTTGTAGCCTAGGCAC--TAGGCGTTTTATAGAAATGCAAGCCAGACAGAGGT---ACTGTTTTCC--TAGAGGGGTAATGTAA-CCTCCGTTAAG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76315188 297 + 90941950 GCTCTGACACTGCTCCTCTCAGCCTCCTCGTTTTACTCCAGCCTCCATTCT---CCACCTCAG-TCTGCTGGGAATGAGACTCTGGCAC-ACAAGTACACAGTATGAATTCTCCCACAGGG--GTATTCTCAACAGGGCTGACTCAGTCAACTGAATAAACACATCAATTCGCAGTGGGAGAC--AGggagaaaggtaaaaacatttCCTGTGATCCACTTGTAGCCTAGGCAC--TAGGCGTTTTATAGAAATGCAAGCCAGACAGAGGT---ACTGTTTTCC--TAGAGGGGTAATGTAA-CCTCCGTTAAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18583715 296 + 33263144 GCTCTGACACTGCTCCTCTTAGCCTCCTCGTTTTACTCCAGCCTCCATTCT---CCACCTCAG-TCTGCTGGGAATGAGACTCT-GCAC-ACAAGTGCACAGTATGAATTCTCCCACTGGG--GTATTCTCAACAGGGCTGACTCAGTCAACTGAATAAACACATCAATTCGCAGTGGGAGAC--GGGGAGAAAGGTAAAAACATTTCCTGTGATCCACTTGTAGCCTAGGCAC--TAGGCGTTTTATAGAAATGCAAGCCAGACAGAGGT---ACTGTTTTCC--TAGAGGGGTAATGTAA-CCTCCATTAAG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198281655 277 + 210400635 GCTCTGAC------------AGGCTCCTC--------CCAGCCTCCATTCT---CCATCCCAG-CCTGTTGGGAATGAGACTCTGGCAC-ACAAGTACACAGTGTGAATTCTCCCAAAGGG--GTATTCTCAACAGGGCTGACTCAGTCAACTGAATAAACACATCAATTAGCAGTGGGAGAT--GGGGAGTAAGGTAAAAACATTTCCTATGAGCCACATGCAGCCTAGGCAC--TAGGTGTTTCACAGAAATGCAAGCCAGGCACAGGC---TCTGTTTTCC--TAGAGGAGAAATGCAA-CCTCTGTTAGG i calJac3.chr1 C 0 C 0 s mm10.chr15 77133517 266 + 104043685 TCTCTGACGCTGCTCTTCTTGA------------ACTCTAACCGCCATTCT---CCACCCCATCCCTGATGGGAGTGAGACTGTGGTCC-ACAAGCAAACAGCATCAATCATCCCACAGGG--CCATTTCTGCCAGAGCTGGCCCAGTCAACTGAACAAACACATCAACTAGTGGTGGG-GAT--TGGGAGCAGG----AAATGCTT-CTAGGGTATACCCATAGTCTAGGCAC------------AGCGAGATGTAACCACGGTAGG------ACTGTCGCCC--ATAAGAGG--GTGCAATCCTCCATCAGG i mm10.chr15 I 1 I 353 s canFam3.chr10 40904269 312 - 69331447 TTCCTGACTCAGCTCCTTGCAGACTGGT--TCCTGCCCTGGTCTCCATTCTCCCCCAACCCAGCCCTGCTGGGGGTGAGGCACTGGCATGGTGAGTTCACAGTACTGACTCTCCCAGAGAGTCTTAGTCTTGACAAAGCTGGCTCAGTCAACTAAATAAACACATCAATTAGCAGTGGAGAGTAGGGGGAGAAAGGTAAAAACATTTTACAGGATCTACTTGTAGCCTTGACACACTACGTGTTTCAAAGAAATACAAGGCAGGCAGAAGCCGAACTGTTACCCAAAAAAAGGGAAATGTAAACCTTTGTTATG i canFam3.chr10 C 0 C 0 a score=576992.000000 s hg38.chr22_KI270876v1_alt 134059 174 + 263666 AGGTCAAGAAGAAATTCTTAGTGGATTATTTTGTTACTTACAGAAATTTCTTTTAAAATTTTTGTTAAAAATGTAACAACAATTGTTTATATATTAAGGGAATGAAATTGGGATAGGAGTGA---TTTAACATTTTCTCTCATATAGCATGCAATGTCTGAATATTTCCCCAAGTAT s panTro4.chr22 34511492 174 + 49737984 AGGTCAAGAAGAAATTCTTAGTGGATTATTTTGTTACTTACAGAAATTTCTTTTAAAATTTTTGTTAAAAATGTAACAACAATTGTTTATATATTAAGGGAATGAAATTGGGATAGGAGTGA---TTTAACATTTTCTCTCATATAGCATGCAATGTCTGAATATTTCCCCAAGTAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30928005 174 + 46535552 AGGTCAAGAAGAAATTCTTAGTGGATTATTTTGTTACTTATAGAAATTTCTTATAAAATTTTTGTTAAAAATGTAACAACAATTGTTTATATACTAAGGAAATGAAATTGGGATAGAAGTGA---TTTAACATCTTCTCTCATATAGCATGCAATGTCTGAATATTTCCCCAAGTAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100478809 174 - 115148730 AGGTCAAGAACAAATTCTTGGTGGATTATTTTGTTACTTATAGAAATTTCTTTTAAAATTTTTGTTAAAAATGGAACAAGAATTGTTTATATACTAAGGGAATGCAATTGGGATAGGAGTGA---TTTAACATCTTCTCCCATATAGCCTGCAATGTCTGAATATTTCCCCAAGTAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80631180 174 + 95678458 AGGTCAAGAAGAAATTCTTAGTGGATTATTTTGTTACTTACAGAAATTTCTTTTAAAATTTTTGTTAAAAATGTAACAACAATTGTTCATATACTAAGGGAATGAAATTGGGATAGGAGTGA---TTCAACATCTTCTCTCATATATTCTGCAATGTCTGAATATTTCCCCAAGTAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81057775 174 - 96509753 AGGTCAAGAAGAAATTCTTAGTGGATTATTTTGTTACTTACAGAAATTTCTTTTAAAATTTTTGTTAAAAATGTAACAACAATTGTTCATATACTAAGGGAATGAAATTGGGATAGGAGTGA---TTCAACATCTTCTCTCATATATTCTGCAATGTCTGAATATTTCCCCAAGTAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76315485 171 + 90941950 AGGTCAAGAAGAAATTCTTAGTGGATTATTTTGTTACTtacagaaatttcttttaaaatttttgttaaaaatgt---aacAATTGTTCATATACTAAGTGAATGAAATTGGGATAGGAGTGA---TTCAACATCTTCTCTCATATATTCTGCAATGTCTGAATATTTCCCCAAgtat i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18584011 174 + 33263144 AGGTCAAGAAGAAATTCTTAGTGGATTATTTTGTTACTTACAGAAATTTCTTTTAAAATTTTTGTTAAAAATGTAACACCAATTGTTCATATACTAAGGGAATGAAATTGGGGTAGGAGTGA---TTCAACATCTTCTCTCATATATTCTGCAATGTCTGAATATTTCCCCAAGTAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198281932 164 + 210400635 AGGTCAAGAAGAAATTCTTAGTGaattattttg----ttatagaaatttcttaaaaaatttttttt---aatGT---AACAATTGTTTATATACTAATGGAATGAAATTGAGATAGGAGTGA---TTTAACATTTTCTCTCACATATCCTGCAATACCTGAATATTTCCTCAAGTAT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40904581 164 - 69331447 AGGCCAAAATGAAATTCTTAG------ATTTTATTCCTTATAGGAATTTTT----AAATTTTCATTTAAAA---AACACATTATGTTTATATACTAAGGGAATAAAATTGGAATAGGAGTGATTTTTTTGCATTTTATTTCATACATTCTACAATGTCTGAAAATATCCCCAATTAT i canFam3.chr10 C 0 C 0 e mm10.chr15 77133783 353 + 104043685 I a score=476444.000000 s hg38.chr22_KI270876v1_alt 134233 133 + 263666 ---------ACATTATTAAAAATGTCAAATGGTTTCAGA----TTTGTATTAAATTTCCAGGCC-----------------------ATATTCCAAAGTTCTATGCTCAGAAGAGAAGTACAACAGCCTTCAGCAAACTATGAGATAACAGTTCACATGAGTATTTCTA s panTro4.chr22 34511666 133 + 49737984 ---------ACATTATTAAAAATGTCAAATGGTTTCAGA----TTTGTATTAAATTTCCAGGCC-----------------------ATATTCCAAAGTTCTATGCTCAGAAGAGAAGTACAACAGCCTTCAGCAAACTATGAGATAACAGTTCACATGAGTATTTCTA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30928179 133 + 46535552 ---------ATATTATTAAAAATGCTAAATGGTTTCAGA----TTTCTATTAAATTTCCAGGCC-----------------------ATATTCCAAAGTTCTATGCTCAGAAGAGAAGTACAACAGCCTTCAGCAAACTATGAGATAACAGTTCACATGAGTATTTCTA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100478983 128 - 115148730 ---------ATATTATTAAAAATGTTAAATGGTTTCAGA----TTTCTATTAAATTTCCAGGCC-----------------------ATATTCCAAAGTTCTATGCTC-----AGAAGTACAACAGCCTTCAGCAAACTATGAGATAACAGTTCACATGAGTATTTCTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80631354 151 + 95678458 ---------ACATTATTAAAAATGTTAAATGGTTTCAGA----TTTCTATTAAATTTCCAGGCTTCTAAATTTCCAGATTTCTACTAAAATTCCAAAGTTCTATGCTC-----AGAAGTACAACAGCCTTCAGCAAACTATGAGATAACAGTTCACATGAGTATTTCTA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81057949 151 - 96509753 ---------ACATTATTAAAAATGTTAAATGGTTTCAGA----TTTCTATTAAATTTCCAGGCTTCTAAATTTCCAGATTTCTACTAAAATTCCAAAGTTCTATGCTC-----AGAAGTACAACAGCCTTCAGCAAACTATGAGATAACAGTTCACATGAGTATTTCTA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76315656 151 + 90941950 ---------acattattaaaaatgttaaatggttTCAGA----TTTCTATTAAATTTCCAGGCCTCTAAATTTCCAGATTTCTAATAAAATTCCAAAGTTCTATGCTC-----AGAAGTACAACAGCCTTCAGCAAACTATGAGATAACAGTTCACATGAGTATTTCTA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18584185 151 + 33263144 ---------ACATTATTAAAAATGTTAAATGGTTTCAGA----TTTCTATTAAATTTCCAGGCTTCTAAATTTCCAGATTTCTACTAAAATTCCAAAGTTCTATGCTC-----AGAAGTACAACAGCCTTCAGCAAACTATGAGATAACAGTTCACATGAGTATTTCTA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198282096 120 + 210400635 ---------GTATTATTAAAAATGTTAAATGGTTTCAGA----TTTCTATTAAATTTCCAGGCC-----------------------ATATTCCACAGT----TGTTC-----AGAA----AACAGCCCTCAGCAAACTATGAGGTAATAGTTCACATGATTATTTCTG i calJac3.chr1 C 0 C 0 s mm10.chr15 77134136 128 + 104043685 ---------ACATTCTTAATAA----AAATAATATAAGAATGTTTTCTAATCAATTTTCAGTTC-----------------------ACATTTCAAAGTTTTAAGTTG-AAAGGGAAATACAACAGCTCCCAGCCAACT----TATGACAGTTGATAGGATTGCTTCTA i mm10.chr15 I 353 I 878 s canFam3.chr10 40904745 142 - 69331447 TTATAACGATTATGATTATAAATATTAAATGGTTTCAGA----TTCCTACTAAATTTCTAGGCT-----------------------ATATTCCAAAGTTCTAAGTTCAGAAGAGAAGTATGATAGCCCCAGGCAAACTATGAGATAATAGTTCACATGATCATTTCTA i canFam3.chr10 C 0 C 0 a score=546499.000000 s hg38.chr22_KI270876v1_alt 134366 167 + 263666 GGTATGAATTTACCTCTATACTT-ATAT-AAAAATGTTTTG--TTTCTATTACCAGAGGCTAAGCTGCTT--------------AAG--TATATCTCATCTGAGAAAAGAAATTACTAGCTTTCTCTTTAGTCCACAAGGCTAGACAGAATAGCTCTTTTCCCTAACCTAGCAATTTATAAACTTTC s panTro4.chr22 34511799 167 + 49737984 GGTATGAATTTACCTCTATACTT-ATAT-AAAAATGTTTTG--TTTCTATTACCAGAGGCTAAGCTGCTT--------------AAG--TATATCTCTTCTGAGAAAAGAAATTACTAGCTTTCTCTTTAGTCCACAAGGCTAGACAGAATAGCTCTTTTCCCTAACCTAGCAATTTATAAACTTTC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30928312 169 + 46535552 GGTATGAATTTACCTCTATACTT-ATAT-AAAAATGTTTTGTTTTTCTATTACCAGAGGCTAAGCTGCTT--------------AAG--TATATCTCATCTGAGAAAAGAAATTACTAGCTTTCTCTTTAGTCCACAAGGCTAGATAGAATAGCTCTTTTCCCTAACCTAGCAATTTATAAACTTTC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100479111 169 - 115148730 GGTATGAATTTACCTCTATACTT-ATAT-AAAAATGTTTTG--TTTCTATTACCAGAGGCTAAGCTGCTT--------------AGGTATATATCTCATCTGAGAAAAGAAATTACTAGCTTTCTCTTTAGTCCACAAAGCTAGATAGAATAGCTCTTTTCCCTAACCTAGCAATTTATAAACTTTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80631505 168 + 95678458 GGTATGAATTTACATCTACACTT-ACATAAAAAATGCTTTG--TTTCTATTAGCAGAGTCTAAGCTGCTT--------------AAG--TATATCTCATCTGAGAAAAGAAATTATTAGCTTTCTCTTTAGTCTACAAGGTTAGACAGAATAGCTCTTTTCCCTAACCTACCAATCTATAAACTTTC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81058100 168 - 96509753 GGTATGAATTTACATCTACACTT-ACATAAAAAATGCTTTG--TTTCTATTAGCAGAGTCTAAGCTGCTT--------------AAG--TATATCTCATCTGAGAAAAGAAATTATTAGCTTTCTCTTTAGTCTACAAGGTTAGACAGAATAGCTCTTTTCCCTAACCTACCAATCTATAAACTTTC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76315807 168 + 90941950 GGTATGAATTTACATCTACACTT-ACATAAAAAATGCTTTG--TTTCTATTAGCAGAGTCTAAGCTGCTT--------------AAG--TATATCTCAtctgagaaaagaaattattagcTTTCTCTTTAGTCTACAACGTTAGACAGAATAGCTCTTTTCCCTAACCTACCAATCTATAAACTTTC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18584336 163 + 33263144 GGTATGAATTTACATCTATACTT-ACATAAAAAATGTTTTG--TTTCTGTTAGCAGAGTCTAAGCTGCTT--------------AAG--TATATCTCATCTG-----ATAAATTATTAGCTTTCTCTTTAGTCTACAAGGTTAGACAGAATAGCTCTTTTCCCTAACCTACCAATCTATAAACTTTC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198282216 167 + 210400635 GGTATGAATTTACCTCTATACTT-AGAT-AAAAATGTTTTG--TTTCTAATACCAGAGGCTAAGCTGCTT--------------AAG--CATATCTCACCTGAGAAAAGAAATTATTAGCTTTCTCTTTAGTCCACAAGGCTAGACAGAATAGCTCTTTTCCCTAACCTAGCAATCAATAAACTTTC i calJac3.chr1 C 0 C 0 s canFam3.chr10 40904887 175 - 69331447 GGCAAGATTTTACCTCCATTTTTAATAT-GAAAATGTTTTG--TTTTTAAAATCATAGGCTAAGCTGCTTATGGTATATATCTCAGG--TATATGTCACCTGAGAACATGAGTTATTAACTT--CTTGCAGTCCACAAAACTAGACATAATTTCTCTTTT-----ACCTAACAGTCTATAAAATTTT i canFam3.chr10 C 0 I 3067 e mm10.chr15 77134264 878 + 104043685 I a score=272336.000000 s hg38.chr22_KI270876v1_alt 134533 77 + 263666 TTCTGTTTCCAGTTAAAAGTAATTCCTTCCTTTCCTATATTCTTATAACATTTAGCTTGC------ATCCCCTATAAGACATT s panTro4.chr22 34511966 77 + 49737984 TTCCGTTTCCAGTTAAAAGTAATTCCTTCCTTTCCTATATTCTTATAACATTTAGCTTGC------ATCCCCTATAAGACACT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30928481 77 + 46535552 TTCCGTTTCCAGTTAAAAGTAATTCTTTCCTTTCCTATATTCTTATAACATTTAGCTTGC------ATCCCCTAAAACACATT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100479280 77 - 115148730 TTCCTTTTCCAGTTAAAAGTAATTCCTTCCTTTCCTATATTCTTACAACATTTAGCTTGC------ATCCCCTACAAGACATT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80631673 77 + 95678458 TTCCGTTTCCAGTTAAAAGTAATTCCTTCCTTTCCTATATTCTTATAACATTTAGCTTGC------ATCCCCTACAAGACACT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81058268 77 - 96509753 TTCCGTTTCCAGTTAAAAGTAATTCCTTCCTTTCCTATATTCTTATAACATTTAGCTTGC------ATCCCCTACAAGACACT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76315975 77 + 90941950 TTCCGTTTCCAGTTAAAAGTAATTCCTTCCTTTCCTATATTCTTACAACATTTAGCTTGC------ATCCCCTACAAGACACT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18584499 77 + 33263144 TTCCGTTTCCAGTTAAAAGTAATTCCTTCCTTTCCTATATTCTTATAACATTTAGCTTGC------ATCCCCTACAAGACACT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198282383 77 + 210400635 TTCTATTTCCAGTTAGTAGTAATTCCTTCCTTTCCTATGTTCTTCTAATATCTAGCTTGC------ATCCTGTACAAGACATT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40908129 83 - 69331447 TCCTGTTTCCAGTTAGAAGAAATTACTTCCTCTCCTGTATTCCCATAGCACTTAGCCTGCACTGAGATTGTGTACAAGACATT i canFam3.chr10 I 3067 I 195 e mm10.chr15 77134264 878 + 104043685 I a score=274147.000000 s hg38.chr22_KI270876v1_alt 134610 83 + 263666 GAAATCTAAAGCCTCATACTTAGCAAACGTAAATATGTATTTTAACTCCCCTATTAGATTAAAAGGCTCATTATGA-----TGGGTGG s panTro4.chr22 34512043 83 + 49737984 GAAATCTAAAGCCTCATACTTAGCAAACGTAAATATGTATTTTAACTCCCCTATTAGATTAAAAGGCTCATTATGA-----TGGGTGG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30928558 83 + 46535552 GAAATCTGAAGCCTCATACTTAGCAAATCTAAATATGTATTTTAACTCCCCTATTAGATTAAAAGGCTCATCATGA-----TGGGTAG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100479357 83 - 115148730 TAAATCTAAAGCCTCATACTTAGCAAATCTAAATTTGTATTTTAACTCCCCTATTAGATGAAAAGGCTCATTATCA-----TGGGTGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80631750 83 + 95678458 TAAATCTAAAGTCTCATATTTAGCAAATCTAAATATGTATTTTAACTCCCCTATTGGATTAAAAGGCTCATTATGA-----TGGGTGG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81058345 83 - 96509753 TAAATCTAAAGTCTCATATTTAGCAAATCTAAATATGTATTTTAACTCCCCTATTGGATTAAAAGGCTCATTATGA-----TGGGTGG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76316052 83 + 90941950 TAAATCTAAAGTCTCATATTTAGCAAatctaaatatgtattttaactcCCCTATTGGATTAAAAGGCTCATTATGA-----TGGGTGG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18584576 83 + 33263144 TAAATCTAAAGTCTCATATTTAGCAAATCTAAATATGTATTTTAACTCCCCTATTGGATTAAAAGGCTCATTATGA-----TGGGTGG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198282460 83 + 210400635 TAAATATAAAGCCTCATACTCAGCAAATCTAAATATGTGTTTTAACTCTCCTATTAGATTAAAAGGTTCATTACGA-----TGGGTGG i calJac3.chr1 C 0 C 0 s canFam3.chr10 40908407 80 - 69331447 TAAATTCAAAACCTTATACTTAACATATCTAGAGAAGTATCTTATCTCT--------ATTAGAAGTTTCTTTATgggcacctgggtgg i canFam3.chr10 I 195 I 151 e mm10.chr15 77134264 878 + 104043685 I a score=1605868.000000 s hg38.chr22_KI270876v1_alt 134693 491 + 263666 AGACAGTCCTGTACAATGTAGAATCCCACATCGTACATAATAAATATGAAGTGTTAAAC--ATTTATGAAATAGAGGAAGACTGAGATAGAAAGTCAGGTGTGTGCACATTACAGCAAACTGCTTTGTTGGGC-----TAGAGAGCATAAC----AAGGGATAACACAGAGTGAAACAAGTGTTGGTATCTTGGGTTGATATCAAACTGGAG-----TGCAGGGATGGGAAAGTAGAAGTGGGGAAG---CATTAGGAAAGCAAAGAATCAACATTTACATGCTTGTGCTTTATGCACTTAATTTCCTTCTGTCTTACAAACACAGGCTTTAAGAGTTGTTGACCAGCTGTGAGTGAAAATCAAATGTAACTATTAATTTCTGAGTTGAGAATGATGTCTTTCTCTTTTAAACCACAGATAGTAACAGAGGCGATACA-TATTATATACAGCCTTTTGGTGTACAATGTGAAATATGCTAAATGTTTTCATTCTGAATTCAAACATAcagt s panTro4.chr22 34512126 491 + 49737984 AGACAGTCCTGTACAATGTAGAATCCCACATCGTACATAATAAATATGAAGTGTTAAAC--ATTTATGAAATAGAGGAAGACTGAGATAGAAAGTCAGGTGTGTGCACATTACAGCAAACTGCTTTGTTGGGC-----TAGAGAGCATAAC----AAGGGATAACACAGAGTGAAACAAGTGTTGGTATCTTGGGTTGATATCAAACTGGAG-----TGCAGGGATGGGAAAGTAGAAGTGGGGAAG---CATTAGGAAAGCAAAGAATCAACATTTACATGCTTGTGCTTTATGCACTTAATCTCCTTCTGTCTTACAAACACAGGCTTTAAGAGTTGTTGACCTGCTGTGAGTGAAAATCAAATGTAACTATTAATTTCTGAGTTGAGAATGATGTCTTTCTCTTTTAAACCACAGATAGTAACAGAGGCGATACA-TATTATATACAGCCTTTTGGTGTACAATGTGAAATATGCTAAATGTTTTCACTCTGAATTCAAACATAcagt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30928641 491 + 46535552 AGACAGTCCTGTACAATGTAGAATCCCACATCGTACTTAATAAATATGAAGTGTTAAAC--ATTTATGAAATAGAGGAAGATTGGGATAGAAAGTCACGTGTGTGCACATTACAGCAAACTGCTTTGTTAGGC-----TAGAGAGCATAAC----AAGGGATAAGACAGAGTGAAACAAGTGTTGGTATCTTGGGTTGATATCAAACTGGAG-----CGTAGGGATGGGAAGGCAGAAGTGGGGAAG---CATTAGGAAAGCAAAGAATCAACATTTACGTGCTTGTGCTTTATGCACTTAATTTCCTTCTGTCTTACAAACACAGGCTTTAAGAGTTGTTGACCTGCTGTGAGAGAAAATCAAATGTAACTATTAATTTCTGAGTTGAGAATAATGTCTTTCTCTTTTAAACCACAGATAGTAACAGAGGCGATACA-TATTATATACAGCCTTTTGGTGTACAATGTGAAATATGCTAAATGTTTTCATTCTAAATTCAAACATAcagt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100479440 489 - 115148730 AGACAGTCCTGTACAATGTAGAATCCCACATCGTACATAATAAATATGAAGTGTTAAAC--ATTTATGAAATAGAGGAAGATTGAGATAGAAAGTCACATGCGTGCACATTACAGCAAACTGCGTTGTTGGGC-----TAGAGAGCATAAC----AAGGGATAACACAGAGTGAAACAAGTGTTGGTATCTTGGGTTGATATCAAACTGGAG-----TGTAGGGATGGGAAGGTAGAAGTGGGGAAG---CATTAGGAAAGCAAAGAATCAACATTTACGTGCTTGTGCTTTATGTGCTTAATTTCCTTCTGTCTTACAAACACAGGCTTTAAGAGTTGTTGACCTGCTGTGAGTGAAAATCAAATGTAACTATTAATT--TGAGTTGAGAATGATGTCTTTCTCTTTTAAACCACAGATAGTAACAGAGGCGATACA-TATTATATACAGCCTTTTGGTGTACAATGTGAAATATGCTAAATGTTTTCATTCTAAATTCAAATATAcagt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80631833 487 + 95678458 AGACAGTCCTGTAGAATGTACACTCCCACATGGTACATAATAAATATGAAGTTTTAAAC--ATTTATGAAATAGAGGAAGATTGAGATAGAAAGTCACGTGCACGCACATTACAGCAAACTGCTTTGTTGGGC-----TAGAGAGCATAAC----AAGGAATAACACAGAATGAAACAAGTGTTGATATCTTGGGTTGATATTAAACTGGAG-----CGTAGGGATGGGAAGGTAGAACTGGTGAAG---TATTAGGAAAGAAAAG----AACATTTACATGCTTGTGCTTTATGCACTTAATTTCCTTCTGTTTTACAAACACAGGCTTTAAGAGTTGTTGACCTGCTGTGAGTGAAAATCAAATGTAACTATTAATTTCTGAGTTGAGAACGATGTCTTTCTCTTTTAAACCACAGATAGTAACAGAGGCGATACA-CATTATATCCAGCCTTTTGTTGTACAATGTGAAACATGCTAAATGTTTCCATTCTAAATTCAAATATAcagt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81058428 487 - 96509753 AGACAGTCCTGTAGAATGTACACTCCCACATGGTACATAATAAATATGAAGTTTTAAAC--ATTTATGAAATAGAGGAAGATTGAGATAGAAAGTCACGTGCACGCACATTACAGCAAACTGCTTTGTTGGGC-----TAGAGAGCATAAC----AAGGAATAACACAGAATGAAACAAGTGTTGATATCTTGGGTTGATATTAAACTGGAG-----CGTAGGGATGGGAAGGTAGAACTGGTGAAG---TATTAGGAAAGAAAAG----AACATTTACATGCTTGTGCTTTATGCACTTAATTTCCTTCTGTTTTACAAACACAGGCTTTAAGAGTTGTTGACCTGCTGTGAGTGAAAATCAAATGTAACTATTAATTTCTGAGTTGAGAATGATGTCTTTCTCTTTTAAACCACAGATAGTAACAGAGGCGATACA-CATTATATCCAGCCTTTTGGTGTACAATGTGAAACATGCTAAATGTTTCCATTCTAAATTCAAATATAcagt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76316135 487 + 90941950 AGACAGTCCTGTAGAATGTAGACTCCCACATGGTACATAATAAATATGAAGTgttaaac--atttatgaaatagaGGAAGATTGAGATAGAAAGTCACGTGCACGCACATTACAGCAAACTGCTTTGTTGGGC-----TAGAGAGCATAAC----AAGGAATAACACAGAATGAAACAAGTGTTGATATCTTGGGTTGATATCAAACTGGAG-----CGTAGCGATGGGAAGGTAGAACTGGTGAAg---tattaggaaagaaaag----aacatttacaTGCTTGTGCTTTATGCActtaatttccttctgttttacaAACACAGGCTTTAAGAGTCGTTGACCTGCTGTGAGTGAAAATCAAATGTAACTATTAATTTCTGAGTTGAGAATgatgtctttctcttttaaacCACAGATAGTAACAGAGGCGATACA-CATTATATCCAGCCTTTTGGTGTACAATGTGAAACGTGCTAAATGTCTCCATTCTAAATTCAAATATACAGT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18584659 487 + 33263144 AGACAGTCCTGTAGAAAGTAGACTCCCACATGGTACATAATAAATGTGAAGTGTTAAAC--ATTTATGAAATAGAGGAAGATTGAGATAGAAAGTCACGTGCACGCACATTACAGCAAACTGCTTTGTTGGGC-----TAGAGAGCATAAC----AAGGAATAACACAGAATGAAACAAGTGCTGATATCTTGGGTTGATATCAAACTGGAG-----CGTAGGGATGGGAAGGTAGAACTGGTGAAG---CATTAGGAAAGAAAAG----AACATTTACATGTTTGTGCTTTATGCACTTAATTTCCTTCTGTTTTACAAACACAGGCTTTAAGAGCTGTTGACCTGCTGTGAGTGAAAATCAAATGTAACTATTAATTTCTGAGTTGAGAATGATGTCTTTCTCTTTTAAACCACAGATAGTAACAGAGGCGATACA-CATTATATACAGCCTTTTGGTGTACAATGTGAAACATGCTAAATGTTTTCATTCTAAATTCAAATATAcagt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198282543 485 + 210400635 AGACAGTCCTGTACAATGTAGAATCCCACACGGTACATAATAAATATGAAGTGTTAAAC--ATTTATGAAACAGAGGAAGAGTGAGAT----AGTCATGTGTGTGCACATTATAGCAAACTGCTTTGCTGGGCTAGAATAGAGAGCATAAC----AAGGGATAACATACAATGAAACAAATGTTGATATCCTGGGTTGATATCAAACT-GCT-----TGCAGGGATGAGAAAGCAGAAGGGATGAAG---CATTAGGAAAGAAAAGAATCAACATTTATGTGCTTATGTTTTATGCACTTCATTTCCTTTTGCCTTACAAACACAGGCTTTAAGAGTTGTTGACCTGCTGTCAGTGAAAATCAGATGTAAC--TTAATTTCTGAGTTGAGAATGATGTCTTTCACCTTTAAACCACAGATAG----AGAGGCGATACA-TATTATATACAGTCTTTAAGTGTACAATGTGAAATATGCTAAATGCTTTTATTCTAAATTCAAATATACATT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40908638 438 - 69331447 AGATTGTTTTATACAGTATAGAATCTCATATAGTGCATAATAAATACTAAGCattaaataaaatttttaaataaaaGAGGATTAAAATGAAGAGTCCCATGTA--CACACTACAGCAAACTGCTTTGTTTGGC-----TAGAGAACATAACTACTAAAGGAT-ATACGTAAGAAAACA-----TGTTATGCTGGGTTGACATCAAATTGGAGAAGACTGTTGAGGTAGGAAGAGAGAATTGGTAGAGTACCATTAGGAGAGAAAAGACTCGACATCTATGTGCTTGT--TAGATCCACTCA--TTCCTTCAACCTCACAAACACAG--------------------------------------------------------AAGTTAAGGATGACGTCTTTCTCCTTTAAATAACATGCAGTAACAGAGGCAATACGTTACCATGTATGGTCTTCTGGTATACAATGTGAACTCTGCTGAATATCTTAATTCTAAACTCAAGTACACAAT i canFam3.chr10 I 151 I 37 e mm10.chr15 77134264 878 + 104043685 I a score=2521425.000000 s hg38.chr22_KI270876v1_alt 135184 848 + 263666 tgtcccttcatatctgcaggtaattggttccaggaacctcccagcccccgcccaccacagatgccaaaatccttggatactcaagccctttatataaaatggcatagtatttgcatataacctacttacacacatcctcttgtgtactttaaatcatctctatattacttataatacctagtacaatgtaaatgttatgtaaatagttgttatgctgtagtgtttagaaaataatgacaaggccctgcatggtggctcatgcctgtaattccagatctttgggaggctgaggagggaggatcacttgagcccaggagtttgagaccaacctaggcaacatagtgggatcctgtctccacaaaaaattttta-aaaattagctgggcatggtagcatgtgcctgtagtcccagttgctcaggaggctgagacaagaggatcacttgagcttgggagatagaggctgtggcgagctatgattatggcactgcattccagcctgggcgacagagtggaaccctgtctc--------aaaaaaaaaaaaaaaaaaaaaaaaaagaaaagaaaag--aaaaaagtGTCAAG--AAAAAAGAGTCTggtcaggc-cagtggctcacagctgtaatcctaatgctttgggaggccaaggagggaggatctcttgagctcaggagtttgagaccaacct-gggcaatgggagaccctgtctcctaaaaagaaaCAATgtctgtacatgtttagtacagacacagtcatccaatttcccaccctaatttttcaatccgcagctacttgaatccacagatgcagaacccgtggctatggacagacaactATAGTATTACAGTCGTCAAACAGG s panTro4.chr22 34512617 839 + 49737984 tgtcccttcatatctgcaggtaattggttccaggaacctcccagcccccgcccaccacagatgccaaaatccttggatactcaagccctttatataaaatggcatagtatttgcatataacctatgtacacacatcctcttgtgtactttaaatcatctctatattacttataatacctagtacaatgtaaatgttatgtaaattgttgttatgctgtagtgtttagaaaataatgacaaggccctgcatggtggctcatgcctgtaattccagatctttgggaggctgaggagggaggatcacttgagcccaggagtttgagaccaacctaggcaacatagtgggatcctgtctccacaaaaaattttta-aaaattagctgggcatggtagcatgtgcctgtagtcccagttgctcaggaggctgagataagaggatcacttgagcttgggagatagaggctgtggcgagctatgattatggcactgcattccagcctgggcgacagagtggaaccctgtctc-----------------aaaaaaaaaaaagaaaagaaaagaaaag--aaaaaagtgtcaag--aaaaaagagtctggtcaggc-cagtggctcacagctgtaatcctaatgctttgggaggccaaggagggaggatcccttgagctcaggagtttgagaccaacct-gggcaatgggagaccctgtctcctaaaaagaaaaaatgtctgtacatgtttagtacagacacagtcatccaatttcccaccctaatttttcaatccgcagctacttgaatccacagatgcagaacccgtggctatggacagacaactATAGTATTACAGTCGTCAAACAGG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30929132 841 + 46535552 tgtcccttcatatctgcaggtaactgcttccaggaacctcccagcccctgcccaccacagatgccaaaatccttggatactcaagccctttatataaaatggcatagtatttgcatgtaacctacttacacacatcctcttgtatactctaaatcatctctatattacttataatacctagtacaatgtaaatgttatgtaaatagttgttatgctgtagtgtttagaaaataatgacaaggccctgcatggtggctcatgcctgtaattccagctctttgggaggctgaggagggaggatcacttgagcccaggagtttgagaccaacctaggcaacatagtgggatcccgtctctacaaaaaattttta-aaaattagctgggcatggtagcatgtgcctgtagtcccagttgctcaggaggctgagacaagaggatcacttgagcttgggagatagaggctgtggcaagctatgattatggcactgcattccagcctgggcgacagagtgggaccctgtctc-------aaaaaaaaaaaaaaaaaaaaaaagaaaaaaaagaaaagaaaaaaaagtgtcaag--aaaaaagagtctggtcaggc-cagtggctcacagctataatcttaatgctttgggaggccaaggagggaggatcccttgagctcaggagtttgagaccaacct-gggcaatgggagaccctgtctcctaaaaagaaaaaatgtctctacgtgtttagt----------tcatccaatttcccaccctaatttttcaatctgcagctacctgaatccacagatgcagaacccgtggctatggacagacaactATAGTATTACAGTCGTCAAACAGG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100479929 851 - 115148730 tgtcccttcatatctgcaggtaattggttccaggaacctcccagcccccacccaccacagatgccaaaatccttggatactcaagtcctttatataaaatggcatagtatttgcatataacctacttacacacatcctcttgtatactttaaatcatctctagattacttataatacctagtacaatgtaaatgttatataagtagtttttatgctgtagtgtttagaaaataatgacaaggccctgcatggtggctcatgcctgtaattccagctctttgggaggctgaggagggaggatcacttgagcccaggagtttgagaccagcctaggcaacatagtgggatcccgtctctacaaaacattttaa-aaaattagttgggcatggtagcatgtgcctgtagtcccagttgctcaggaggctgagacaagaggatcacttgagcttgggaggtagaggctgtggcgagctatgattatggcactgcattccagcctgagtgacagagtgggaccctgtctcaa-----aaaaaaaaaaaaaaaaaaaaaagaaaagaaaagaaaag--aaaaaagtgtcaag--aaaaaaaagtctggtcaggc-cagtggctcacagctgtaatcctaatgctttgggaggccaaggagggaggctcccttgagctcaggagttggagaccaacct-gggcaatgggagaccctgtctcctaaaaagaaaaaatgtctgtacgtgtttagtacagagacagtcatccaatttcccaccctaatttttcaatccgcagctacttgaatccacagatgcagaacccatggctatggacagacaactATAGTATTATAGTCATCAAACAGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80632320 857 + 95678458 tgtcccttcgtattagcaggtaattggttccaggaacctcccagcccccacccaccacagatgacaaaatccttggatactcaagtcctttatataaaatggcatagtatttgcatgtaacctacttacacacatcctcttgtatactttaaatcatctctcgattacttataatacctactacaatgtaaatgttatctagatagttgttatgctgtagtgttgagaaaataatgacaaggccctgcatgctggctcatgcctgtaatcccagctctttgggaggctgaggagagaggatcacttgagcccaggagtgtgagaccagcctaggcaacacagtgggatcccgtctctacaaaaattttttttaaaattagctgggcatggtagcatgtgcctatagtcccagttgctcaggaggctgagacaagaggatcacttgagcttgggagacagaggctgtggtgagctatgatcacggcactgcattccagcctgggcaacagagtgggaccctgtctcaaaaaagaaaagaaaagaaaagaaaaagaaaaaagaaaagaaaag--aaaaaagtgtcaag--aaaaaaaagtctggccagggacagtgactcacagctataatcccaatgctttgggaggccaaggcaggaggatcccttgagctcaggagtttgagaccaacct-aggcaatgggagaccctgtctcctaaaaagaaaaaacgtctgtacatgttgagtacagacacagtcacccaatttcccaccctaatttttcaatcc-tagctagctgaatccacagatgcagaacccgtgactatggaaaaacaactATAGTATCACAGTCATCAAACAGG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81058915 857 - 96509753 tgtcccttcgtattagcaggtaattggttccaggaacctcccagcccccacccaccacagatgacaaaatccttggatactcaagtcctttatataaaatggcatagtatttgcatgtaacctacttacacacatcctcttgtatactttaaatcatctctcgattacttataatacctactacaatgtaaatgttatctagatagttgttatgctgtagtgttgagaaaataatgacaaggccctgcatgctggctcatgcctgtaatcccagctctttgggaggctgaggagaggggatcacttgagcccaggagtgtgagaccagcctaggcaacacagtgggatcccgtctctacaaaaatttttttcaaaattagctgggcatggtagcatgtgcctatagtcccagttgctcaggaggctgagacaagaggatcacttgagcttgggagacagaggctgtggtgagctatgatcacggcactgtattccagcctgggcaacagagtgggaccctgtctcaaaaaagaaaagaaaagaaaaagaaaaaagaaaagaaaagaaaag--aaaaaagtgtcaag--aaaaaaaaGTCTggccagggacagtggctcacagctataatcccaatgctttgggaggccaaggcaggaggatcccttgagctcaggagtttgagaccaacct-aggcaatgggagaccctgtctcctaaaaagaaaaaaagtctgtacatgttgagtacagacacagtcacccaatttcccaccctaatttttcaatcc-tagctagctgaatccacagatgcagaacccgtgactatggaaaaacaactATAGTATCACAGTCATCAAACAGG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76316622 854 + 90941950 TGTCCCTTCGTATTAGCAGGTAATTGGTTCCAGGAacctcccagcccccacccacgACAGATGACAAAATCCTTGGATActcaagtcctttatataaaatggcatagtatttgcatgtaacctactTACACACatcctcttgtatactttaaatcatctctcgattacttataatacctactACAATGTAAAcgttatgtaaatagttgttatgctgtaGTGTTGAGAAAATAATGACAAGGCCctgcatgctggctcatgcctgtaatcccagctctttgagaggctgaggagagaggatcacttgagcccaggagtgtgagaccagcctagccaacacagtgggatcccgtctctacaaaaattttttt-aaaattagctgggcatggtagcatgtgcctatagtcccagttgctcaggaggctgagacaagaggatcacttgagcttgggagacagaggctgtggtgagctatgatcacggcactgcattccagcctgggcaacagagtgggaccctgtctcaaaaaagaaaagaaaagaaaagaaaaagaaaaaagaaaagaaaag--aaaaaagtgtcaag----aaaaaagtctggccagggacagtggctcacagctataatcccaatgctttgggaggccaaggcaggaggatcccttgagctcaggagtttgagaccaacct-aggcaatgggagaccctgtctcctaaaaagaaaaaacgtCTGTACATGTTGAGTACAGACACAGTCATCCAATTTCCCACCCTAATTTTTCAATCC-CAGCTagctgaatccacagatgcagaacccgtGACTATGGAAAAACAACTATAGTATCACAGTCATCAAACAGG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18585146 846 + 33263144 tgtcccttcgtattagcaggtaattggttccaggaacctcccagcccccacccaccacagatgacaaaatccttggatactcaagtcctttatataaaatggcatagtatttgcatataacgtactgacacacatcctcttgtatactttaaatcatctctcgattacttataatacctactacaatgtaaatgttaggtaaatagttgttatgctgtagtgttgaggaaataatgacaaggccctgcatgctggctcatgcttgtaatcccagctctttgggaggctgaggagagaggatcacttgagcccaggagtgtgagaccagcctaggcaacacagtggaatcccgtctctacaaaatttttttt-taaattagctgggcatggtagcatgtgcctatagtcccagttgctcaggaggctgagacaacaggatcacttgagcttgggggacagaggctgtggtgagctatgatcatggcactgcattccagcctgggcaacagagtgggaccctgtctcaaaaaagaaaaga----------aaaagaaaaaagaaaagaaaag--aaaaaagtgtcaag--aaaaaaaagtctggccaggcacagtggctcacagctataatcccaatgctttgggaggccaaggcaggaggatcccttgagctcaggagtttgagaccaacct-aggcaatgggagaccctgtctcctaaaaagaaaaaacgtctgtacatgctgagtacagacacagtcatccaatttcccaccctaatttttcaatcc-cagctagctgaatccacagatgcagaacccgtgactatggaaaaacaactATAGTATCACAGTCATCAAACAGG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198283028 832 + 210400635 TGTCCCTTCATATCTGCAGGTAATTGCTTCCTGGAACCTCCCAGCCCCCacccaccacagatgccaaaatccttggatactcaagtcctttatataaaatggcatagtatttgcatataatctacttacatacatcctcctgtatactttaaatcatctctagattacttataatacctagtacaatgtaaatgttatataaatagttgttatgctgtagtgtttagaaaataatgacaaggccctgcatagtggctcatgcctgtaatccgagctgtttgggaagctgaggagggaggatcacttgagcccaggagtttgagatcagcttaggcaacacggtggaatcctgcctctacaaaaatttttta-aaaattagctgggcatggtagcacgtgcctgtagtcccagttgctcaggaggctgagacaagaggattacttgagcttgggagacagaggctgcagcgagctatgattacagcaccgcattccagcctgggcgacagagtgggaccctgtctc----------------------------aaaaaaataaagaaaag--aaaaaagtgccaagaaaaaaaagagtctggccaggcacggtggctcacacctataatcccaatgctttgggaagccaaggtggggggatcccctgatctaaggagattgagaccaacctggggcaaagggagaccctgtctcctaaaaagaaaaaaagtctgtaagtgtttagtacagacacagtcatccgatttcgctccctaatttttcaatccacagctagctgaatgcacagatgcagaacctgtggctatggacagacaactATAGTATCACAGTCATCAAACAGA i calJac3.chr1 C 0 C 0 e mm10.chr15 77134264 878 + 104043685 I e canFam3.chr10 40909076 37 - 69331447 I a score=656994.000000 s hg38.chr22_KI270876v1_alt 136032 201 + 263666 AACCCATTCAACAGTCTATTGCCTTACCCACAGCAATCTCAGAGGTTCAATCATCACCTACCGACAGGTGACTTTCAGTGTTTTTTCTAGGTCCAACCATGTGCCTTCTCCCCAGTTTACATGGaatg--tagtaaaacagaagaaagcatgaacctaaaagtcagacttgagtttaaattccaattataccacttaccagat s panTro4.chr22 34513456 201 + 49737984 AACCCATTCAACAGTCTATTGCCTTACCCACAGCAATCTCAGAGGTTCAATCATCACCTACCGACAGGTGACTTTCAGTGTTTTTTCTAGGTCCAACCATGTGCCTTCTCCCCAGTTTACATGGaatg--tagtaaaacagaagaaagcatgaacctaaaagtcagacttgagtttaaattccaattataccacttaccagat i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30929973 201 + 46535552 AACCCATTCAACAGTCTATTGCCTTACCCACAGCAATCTCAGAGGTTCAATCATCACCTACCGAAAGGTGACTTCCAGTGTTTTTTCTAGGTCCAACCATGTGCCTTCTCCCTAGTTTACATGGaatg--tagtaaaacggaagaaagcatgaacctaaaagtcagacttgagtttaaatcccaattataccacttaccagat i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100480780 201 - 115148730 AACCCATTCAACAGTCTATTGCCTTACCCACAGCAATCTCAGAGGTTCAATTATCACCTACCAACAGGTGACTTCCAGTGTTTTTTCTAGGTTCAACCGTGTGCCTTCTCCCTAGTTTACATGAaatg--tagtaaaacagaagaaagcatgaacctaaaagtcagacttgagtttaaatcccaattataccacttaccagat i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80633177 198 + 95678458 AACCCATTCAACGGTCTACTGCCTTACCCATAGCAATCTCACAGGTTCAATCATCACCTACCGACAGGTGACTTCCACTGTTTTTTCTAGGTCCAACCATGTGCTTTCTCCCTAGTTTACATGGgatg--taataaaa---aagaaagtatgaatctgaaaggcagacttgagtttaaatcccaattacacctcttaccagAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81059772 198 - 96509753 AACCCATTCAACGGTCTATTGCCTTACCCATAGCAATCTCACAGGTTCAATCATCACCTACCGACAGGTGACTTCCACTGTTTTTTCTAGGTCCAACCATGTGCTTTCTCCCTAGTTTACATGGGATG--TAATAAAA---AAGAAAGTATGAACCTGAAAGGCAGACTTGAGTTTAAATCCCAATTACACCTCTTACCAGAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76317476 198 + 90941950 AACCCATTCAACGGTCTATTGCCTTACCCATAGCAATCTCACAGGTTCAATCATCACCTACCGACAGGTGACTTCCACTGTTTTTTCTAGGTCCAACCATGTGCTTTCTCCCTAGTTTACATGGgatg--taataaaa---aagaaagtatgaacctgaaaggcagactTGAGTTTAAATCCCAATTACACCTCTTACCAGAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18585992 198 + 33263144 AACCCATTCAACGGTCTATTGCCTTACCTATAGCAATCTCACAGGTTCAATCATCACCTACCGACAGGTGACTTCCACTGTTTTTTCTAGGTCCAACCATGTGCTTTCTCCCTAGTTTACATGGGATG--TAATAAAA---AAGAAAGTGTGAACCTGAAaggcagacttgagtctaaatcccagttacacctcttaccagat i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198283860 201 + 210400635 AACCCATTCAAAGGTCTATTACCTTACCCACAGCAATCTCAGAGGTTCAACCATGACCTAGAGAGAGGTGACTTCCAAAGTTTTTTCTAGGTCCAACCATGTGCTTTCTCCCAAGTTTATATGGGATG--TAGTAAAATAGAAGAAAGCATGAACCTAAAAGGCAGACTTGAGTTTAAATCCCAGTTACATCTCGTACCGGAT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40909113 187 - 69331447 AATTCTTTTATCGGTCAATTCCCTCACCCACAGCAATCT-AGAACTTCAATTGTTAT--------GGGTGACGTCCAAA--TATTTTTAGGTCCAACCATGTTCTTTCTCCTATGCTTTCATGAGAGGGAGAGTAAAA-ACAAAAAAGTGTgagcctgaa----agatctgagttaaaatcccaactgtacctcctaccagat i canFam3.chr10 I 37 I 736 e mm10.chr15 77134264 878 + 104043685 I a score=350637.000000 s hg38.chr22_KI270876v1_alt 136233 117 + 263666 gggtTGTTTACTTCAGAGGTGGGTGTGAAAATTAATTGAGAGAGCAGGTGAAACTGTTTTGTTACTGATTCTTTAGCATATTTTCTGTTCCTACTGAATTATTCTGAATATTATTTA s panTro4.chr22 34513657 117 + 49737984 gggtTGTTTACTTCAGAGGTGGTTGTGAAAATTAATTGAGAGAGCAGGTGAAACTGTTTTGTTACTGATTCTTTAGCATATTTTCTGTTCCTACTGAATTATTCTGAATATTATTTA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30930174 117 + 46535552 gggtTGTTTACTTCAGAGGTGGTTGTGAAAATTAATTGAGAGAGCAGGTGAAATTGTTTTGTTATTGATTCTTTAGCATATTTTCTGTTCCTACTGAATTATTCTGAATATTATTTA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100480981 117 - 115148730 gggtTGTTCACTTCAGAGGTGGTTGTGAAAATTAATTGAGAGAGCAGGTGAAACTGTTTTGTTATTGATTCTTTAGCATATTTTCTGTTTCTACTGAATTATTCTGAATATTATTTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80633375 117 + 95678458 AGGTtgtttacttcacaggtggttgtgaaaattaattgagagagcaggtaaaactgttttgtaactgATTCTTTAGCATATTTTCTGTTCCTACTGAATTATACTGAATATTATTTA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81059970 117 - 96509753 AGGTtgtttacttcacaggtggttgtgaaaattaattgagagagcaggtaaaactgttttgtaactgATTCTTTAGCATATTTTCTGTTCCTACTGAATTATACTGAATATTATTTA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76317674 117 + 90941950 GGGTTGTTTACTTCACAGGTGGTTGTGAAAATTAATTGAGAGAGCAGGTGAAACTGTTTTGTAACTGATTCTTTAGCATATTTTCTGTTCCTACTGAATTATactgaatattattta i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18586190 113 + 33263144 gggtTGTTTACTTCAGAGGTGGTTGTGAA----AATTGAGAGAGCAGGTGAAACTGTTTTGTAACTGATTCTTTAGCATATTTTCTGTTCCTACTGAATTATACTGAATATTATTTA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198284061 114 + 210400635 AGGTTGTTTACTTCAGATGTGGTTGTGAAA---AATCGAGAGAGCAAGTGAAACTGTTTTGTTAATGATTCTTTAGCATATCTTCTGTTTCTACTGAGTTATTCTGAATATTACTTA i calJac3.chr1 C 0 C 0 e mm10.chr15 77134264 878 + 104043685 I e canFam3.chr10 40909300 736 - 69331447 I a score=153108.000000 s hg38.chr22_KI270876v1_alt 136350 48 + 263666 AAACCTATGCAC--AGTACTGTAAGAGAACACAGA---AATGACCCAAAATAT s panTro4.chr22 34513774 48 + 49737984 AAACCTACGCAC--AGTACTGTAAGAGAACACAGA---AATGACCCAAAATAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30930291 48 + 46535552 AAAGCTATGCAC--AGTACTGTAAGAGAACACAGA---AATGACCCAAAATAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100481098 48 - 115148730 AAAGCTATGCAC--AGTACTGTAAGAGAACACAGA---AATGACCCAAAATAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80633492 48 + 95678458 AAAGCTATGCAC--AGTATTGTAAGAGAACACAGA---AATGACCCAAAATAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81060087 48 - 96509753 AAAGCTATGCAC--AGTATTGTAAGAGAACACAGA---AATGACCCAAAATAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76317791 48 + 90941950 aaagctATGCAC--AGTATTGTAAGAGAACACAGA---AATGACCCAAAATAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18586303 48 + 33263144 AAAGCTATGCAC--AGTATTGTAAGAGAACACAGA---AATGACCCAAAATAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198284175 46 + 210400635 AAAGCTATACAA--AGTATTAT--GAGAACACAGA---AATAGCCCAAAATAT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40910036 53 - 69331447 AAAGCTAAGCATAAAGGACTACAGGAGATCTCAAAAAGAAGGGTCCCAAATGG i canFam3.chr10 I 736 C 0 e mm10.chr15 77134264 878 + 104043685 I a score=1177550.000000 s hg38.chr22_KI270876v1_alt 136398 335 + 263666 AATTGTCTTCATATTTCTAGGATAACTAAAGTCTATGTAATCTTTGAGAGAGAAGGGTGTATTTTTGTTTATATCTTCTCATTTATTCCTCAACTTCATTCTAATTTTCTCAGTTTGGTCACCTTGAGTCCCACTTATATACATAAACTGCTATTGTATTGCTTCTAATCAACAGGCTGCAAATCCT----------AAAAGCTTCTCAATTCCCATACCACATATATGGTCAGAATGGATCATGCACACAAACAGATCAATATTAATTTTATTCACACCATCATAAAAG-AATCACTTCATTATTTTGGTAGAGCATATTCTCACCAGTTTATTACCACTGACAA s panTro4.chr22 34513822 335 + 49737984 AATTGTCTTCATATTTCTAGGATAACTAAAGTCTATGTAATCTTTGAGAGAGAAGGGTGTATTTTTGTTTATATCTTCTCATTTATTCCTCAACTTCATTCTAATTTTCTCAGTTTGGTCACCTTGAGTCCCACTTATATACATAAACTGCTATTGTATTGCTTCTAATCAACAGGCTGCAAATCCT----------AAAAGCTTCTCAATTCCCATACCACATATATGGTCAGAATGGATCATGCACACAAACAGATCAATATTAATTTTTTTCACACCATCATAAAAG-AATCACTTCATTATTTTGGTAGAGCATATTCTCACCAGTTTATTACCACTGACAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30930339 334 + 46535552 AA-TGTCTTCATATTTATAGGATAACTAAAGTCTATGTAATCTTTGAGAGAGAAGGGTGTATTTTTGTTTATATCTTCTCATTTATTCCTCAACTTCATTCTAATTTTCTCAGTTTGGTCACCTTGAGTCCCACTTACATACATAACCTGCTATCGTACTGCTTCTAATCAACAAGCTGCAAATCCT----------GAAAGCTTCTCAATTCCCATACCACATATATGGTCAGAATGGATCATGCAAACAAACAGATCAATATTAATTTTATTCACACCATCATAAAAG-AATCACTTCATTATTTTGGTAGAGCATATTCTCACCAGTTTATTACCACTGACAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100481146 336 - 115148730 AATTGTCTTCATATTTCTAGGATAATTAAAGTCTATGTAAGCTTTGAGAGAGAAGGGTGTATTTTTGTTTATATCTTCTCATTTATTCCTCAACTTCATTCTAATTTTCCCAGTTTGGTCACCTTGAGTCCCACTTACATACATAACCTGCTATTGTATTGCTTCTAATCAACAGGCTGCAAATCCT----------AAAAGCTTCTCAATTCCCATACCACATATATGGTCAGAATGGATCATGCACACAAACAGATCAATATTAATTTTATTCACACCATCATAAAAATAATCACCTCATTATTTAGGTAGAGCATATTCTCACCAGTTTATTACCACTGACAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80633540 336 + 95678458 AATTGTCTTCATATTTCTAGGATAATTAAAGTCTGTGCAATCTTAGAAAGACAAGGGTGTATTTTTGTTTATATCTTCTCATTTATTCCTCAACTTCACTCTAATTTTCTCAGTTTGGTCATCTTGAGTCCCACTTATATACATAACCTATTACTGTATTAATTCTAACCAACAGGCTGCAAATTCT----------AAAAGCTTCTCAATTCCCATACCACATATATGGTCAGAATGGACCATGCACACAAACAGATCAATATTAATTTTATTCATACCATCATAAAAAGAATCACTTCATTATTTAGGTAGAGCATATTCTCACCAGTTTATTACTACTGACAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81060135 336 - 96509753 AATTGTCTTCATATTTCTAGGATAATTAAAGTCTGTGCAATCTTAGAAAGACAAGGGTGTATTTTTGTTTATATCTTCTCATTTATTCCTCAACTTCACTCTAATTTTCTCAGTTTGGTCATCTTGAGTCCCACTTATATACATAACCTATTATTGTATTAATTCTAACCAACAGGCTGCAAATTCT----------AAAAGCTTCTCAATTCCCATACCACATATATGGTCAGAATGGACCATGCACACAAACAGATCAATATTAATTTTATTCATACCATCATAAAAAGAATCACTTCATTATTTAGGTAGAGCATATTCTTACCAGTTTATTACTACTGACAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76317839 334 + 90941950 AATTGTCTTCATATTTCTAGGATAATTAAAGTC--TGCAATCTTAGAAAGACAAGggtgtatttttgtttatatcttctcatttattcctcaacTTCACTCTAATTTTCTCAGTTTGGTCATCTTGAGTCCCACTTATATACATAACCTACTATTGTATTAATTCTAACCAACAGGCTGCAAATCCT----------AAAAGCTTCTCAATTCCCATACCACATATATGGTCAGAATGGACCATGCACACAAACAgatcaatattaattttattcataCCATCATAAAAAGAATCACTTCATTATTTAGGTAGAGCATATTCTCACCAGTTTATTACTACTGACAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18586351 336 + 33263144 AATTGTTTTCATATTTCTAGGATAATTAAAGTCTGTGCAATCTTAGAAAGACAAGGGTGTATTTTTGTTTATATCTTCTCATTTATTCCTCAACTTCACTCTAATTTTCTCAGTTTGGTCATCTGGAGTCCCACTTATATACATAACCTACTATTGTATTAGTTCTAACCAACAGGCTGCAAATCCT----------AAAAGCTTCCCAATTCCCATACCACATATATGGTAAGAATGGACCACGCACACAAACAGATCAATATTAATTTTATTCATACCATCATAAAAAGAATCACTTCATTATTTAGGTAGAGCATATTCTCACCAGTTTATTACTACTGACAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198284221 315 + 210400635 AACTGTCTTCATATTTCTAGGA----TAAAGTGTATGTAATCTTGGAGAGAGAAGGATGTATTTTTGTTTATATCTTCTCAATTATTTCTCAACTTCATTCTGATTTTCTCAGTTTGGTCAT-----------CTTACATACATAACCTACTATTGCACTGCTTCTAATCAACAGGCTGCAAATCCT----------AAAAGCTTCTCAATTCCCATACCACATATATGGTCAGAATGGATCATGCACACAAATAGATCAATATTAATTTTATTCATACCATCATAAAAAGAATCAC----TTATTTAGATAGTATACATCCT-ACCAG-TTATCACCACTGACAA i calJac3.chr1 C 0 M 517 s mm10.chr15 77135142 229 + 104043685 AATTATTACCATCTTTCTAGGA----TGAAGTCCATGCAAT-GTAGAAAGAGAAG---GTATTTTTATTGTTGTCTTCCCATTCCTTTCTCAACTTCATTCTAATTTTTCCA-TTTGGTAATCTTGACTCCAATTTACAGGCATAAC-----------------CTAAACAGCAGCCTGCAAATTCT----------AAAGGCAGCCCATT--------------------------------------CAGACAG-----------------TCTCTCAATCACAAAAAGAAGTACTT-----------GAAAGAATATTCC--CCAGTTTA------------- i mm10.chr15 I 878 C 0 s canFam3.chr10 40910089 337 - 69331447 AAATGCCTCAACTATGCTAGGATAATTAAAGTCCAT--AATCTTGGAGAGAAGA----GTATTTTTATTTATATCTTCCCACTTACTTTTCAACTTCAATCTAATTTTTTCAGTTTGGCAATCTCAAGCCCCACTTATATACCCGATCAATTAATGTGCTTCTTCTACTCAACAGGCTGCAAATCCTATCTCAAGAGAAAAGTTTCCCAATTCCTGTATTACATCTTTGATCAGAATGAATCGTTGA--TAAAGAGATCAATATGAATTTTATTTACACCTTCATAACAATAATCATTTTGTTATTTCAGTAGAGCATCTTCTTACCAGTTTATCACCA-TGCCAG i canFam3.chr10 C 0 C 0 a score=465457.000000 s hg38.chr22_KI270876v1_alt 136733 164 + 263666 TGTCACTAATAGTTTTTCTAGTGCTATTTATAAATGGAAATTAATTTTCTAGGATTATAATACAAATAAAATGTTTTTACTTTTAAGTATTTTTACAAATTATATCATTTTGATCCCTTGGGATTTGCTTAGATGGGCTCAGATTTCAAACTCTATTTGCCTTT s panTro4.chr22 34514157 164 + 49737984 TGTCACTAATAGTTTTTCTAGTGCTATTTATAAATGGAAATTAATTTTCTAGGATTATAATACAAATAAAATGTTTTTACTTTTAAGTATTTTTACAAATTATATCATTTTGATCCCTTGGGATTTGCTTAGATGGGCTCAGATTTCAAACTCTATTTGCCTTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30930673 164 + 46535552 TGTCACTAATAATTTTTCTAGTGCTGTTTATAAATGGAAATTAATTTTCTAGGATTATAATACAAATAAAATGTTTTTACTTTTAAGTATTTTTACAAATTATATCATTTTGATCCCTTGGGATTTGCTTTGATGGGCTCAGATTTCAAACTCTATTTGCCTTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100481482 164 - 115148730 CGTCACTCATAATTTTTCTAGTGCTGTTTATAAATGGAAATTAATTTTCTAGGATTATAATACAAATAAAATGTTTTTACTCTTAAGTATTTTTACAAATTATATCATTTTGATCCCTTGGGATTTGCTTAGATGGGCTCAGATTTCAAACTCTATTTGCCTTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80633876 158 + 95678458 TGTCACTAGTAATTTTTCTAGTGCTGTTTATAAATGGAAATTAATTTTCCAGGattataatacaaataaaatgttt------ttaactatttttataaattatatCATTTTGATCCCTTGGGATTTGCTTAGGTGGGCTCAGATTTCAAGCTCTATTTGCCTTT i rheMac3.chr10 C 0 I 333 s macFas5.chr10 81060471 158 - 96509753 TGTCACTAGTAATTTTTCTAGTGCTGTTTATAAATGGAAATTAATTTTCCAGGATTATAATACAAATAAAATGTTT------TTAACTATTTTTATAAATTATATCATTTTGATCCCTTGGGATTTGCTTAGGTGGGCTCAGATTTCAAGCTCTAtttgccttt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76318173 158 + 90941950 TGTCACTAGTAATTTTTCTAGTGCTgtttataaatggaaattaattttccaggattataatacaaataaaatgtct------taaactatttttataaattacatcATTTTGATCCCTTGGGATTTGCTTAGGTGGGCTCAGATTTCAAGctctatttgccttt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18586687 158 + 33263144 TGTCACTAGTACTTTTTCTAGTGCTGTTTATAAATGGAAATTAATTTTCCAGGATTATAATACAAATAAAATGCTT------TTAAGTATTTTTATAAATTATATCATTTTGATCCCTTGGGATTTGCTTAGGTGGGCTCAGATTTCAAGCTCTAtttgccttt i chlSab2.chr19 C 0 C 0 s mm10.chr15 77135371 101 + 104043685 -----------------------------------------------------ACTAGGATGCCA--AAAATATTTCTGCTTTTAAGCA-TTTTACAA---GCGTCATTTTTATTCCCTGGGA---GCTTAGGTAGGCTCAGATTTCAAACTTGGCCTGCCTT- i mm10.chr15 C 0 C 0 s canFam3.chr10 40910426 163 - 69331447 CATCACTTAGCATTTTCATCATGCTGTTGGAAAATGGAAATTAATTCTCTAGCTTTGTAACAAAAAGAAAATATTTTTGCCTTTCAGTA-TTTTACAAATGAGATCATTTGTATCCCCTGGGATTTGCCTAGATAGGCTCAGATTTCAAACTCTATCTGCCTTC i canFam3.chr10 C 0 C 0 e calJac3.chr1 198284536 517 + 210400635 M a score=-5165.000000 s hg38.chr22_KI270876v1_alt 136897 4 + 263666 G----------------TTT-- s panTro4.chr22 34514321 4 + 49737984 G----------------TTT-- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30930837 4 + 46535552 G----------------TTT-- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100481646 4 - 115148730 G----------------TTT-- i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81060629 3 - 96509753 -----------------ttt-- i macFas5.chr10 C 0 I 135 s papAnu2.chr10 76318331 3 + 90941950 -----------------ttt-- i papAnu2.chr10 C 0 I 23 s chlSab2.chr19 18586845 20 + 33263144 gtctttttttttgttttttt-- i chlSab2.chr19 C 0 I 5 s mm10.chr15 77135472 3 + 104043685 -----------------TCT-- i mm10.chr15 C 0 C 0 s canFam3.chr10 40910589 4 - 69331447 ------------------GTAA i canFam3.chr10 C 0 C 0 e calJac3.chr1 198284536 517 + 210400635 M e rheMac3.chr10 80634034 333 + 95678458 I a score=2486.000000 s hg38.chr22_KI270876v1_alt 136901 2 + 263666 AA s panTro4.chr22 34514325 2 + 49737984 AA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30930841 2 + 46535552 AA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100481650 1 - 115148730 -A i nomLeu3.chr7b C 0 C 0 s calJac3.chr1 198285061 2 + 210400635 AA i calJac3.chr1 M 517 C 0 s mm10.chr15 77135475 2 + 104043685 AA i mm10.chr15 C 0 C 0 s canFam3.chr10 40910593 2 - 69331447 GA i canFam3.chr10 C 0 C 0 e rheMac3.chr10 80634034 333 + 95678458 I e papAnu2.chr10 76318334 23 + 90941950 I e macFas5.chr10 81060632 135 - 96509753 I e chlSab2.chr19 18586865 5 + 33263144 I a score=73213.000000 s hg38.chr22_KI270876v1_alt 136903 22 + 263666 --------AAAAAAAG------------AGTACCTAGGCAAA s panTro4.chr22 34514327 22 + 49737984 --------AAAAAAAG------------AGTACCTAGGCAAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30930843 22 + 46535552 --------AAAAAAAG------------AGTACCTAGGCAAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100481651 22 - 115148730 --------AAAAAAAG------------AGTACCTAGGCAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80634367 22 + 95678458 --------aaaaaaGG------------AGTACCTAGGCAAA i rheMac3.chr10 I 333 C 0 s macFas5.chr10 81060767 22 - 96509753 --------AAAAAAGG------------AGTACCTAGGCAAA i macFas5.chr10 I 135 C 0 s papAnu2.chr10 76318357 22 + 90941950 --------aaaaaaag------------agtacCTAGGCAAA i papAnu2.chr10 I 23 C 0 s chlSab2.chr19 18586870 22 + 33263144 --------tAAAAAAG------------AGTACCTAGGCAAA i chlSab2.chr19 I 5 C 0 s calJac3.chr1 198285063 22 + 210400635 --------AAAAAAAA------------AGTGCTTAGGCAAA i calJac3.chr1 C 0 C 0 s mm10.chr15 77135477 22 + 104043685 --------AACCAACC------------AGTCACTGGGAAGA i mm10.chr15 C 0 I 2198 s canFam3.chr10 40910595 42 - 69331447 AAGAGTTTACAAAAAGTACTCAGTGGACAGAACCTAAGCAAA i canFam3.chr10 C 0 C 0 a score=457663.000000 s hg38.chr22_KI270876v1_alt 136925 141 + 263666 GGCCTGTCA---TTCTCAGATCTGGTACTAAAAGCAGTGGCTTCTGCCCAGCTGTCTGTGACAAGAGGAAAATAACAGCTATAT-AACTGTTCTCTCAGAAAGATAAGAAGACAACACTGGATTTAAAATCATCTAGGATCCGTT s panTro4.chr22 34514349 141 + 49737984 GGCCTGTCA---TTCTCAGATCTGGTACTAAAAGCAGTGGCTTCTGCCCAGCTGTCTGTGACAAGAGGAAAATAACAGCTATAT-AACTGTTCTCTCAGAAAGATAAGAAGACAACACTGGATTTAAAATCATCTAGGATCCGTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30930865 141 + 46535552 GG-CTGTCA---TTCTCAGATCTCGTACTAAAAGCAGTGGCTTCTGCCCAGCTGTCTGTGACAAGAGGAAAATAACAGCTATATAAACTGTTCTCTCAGAAAGATAAGAAGACAACACTGGATTTAAAATCATCTAGGATCAATT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100481673 141 - 115148730 GGTCTGTCA---TTCTCAGATCTGGTACTAAAAGCAGTGGCTTCTGCCCAGCTGTCTGTGACAAGAGGAAAATAACAGCTATAT-AACTGTTCTCTCAGAAAGATAAGAAGACAAAACTGGATTTAAAATCATCTAGGATCAATT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80634389 144 + 95678458 GGCCTATCATTCTTCTCAGATCTGGTACTAAAAGCAGTGGTTTCTGCCCAGGTGTCTGTGACAAGAGGAAAATAACAGCTATAT-AACCGTTATCTCAGAAAGATAAGAAGACAACACTGGATTTAAAATCATCTAGGATCAACT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81060789 144 - 96509753 GGCCTATCATTCTTCTCAGATCTGGTACTAAAAGCAGTGGTTTCTGCCCAGGTGTCTGTGACAAGAGGAAAATAACAGCTATAT-AACCGTTATCTCAGAAAGATAAGAAGACAACACTGGATTTAAAATCATCTGGGATCAACT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76318379 144 + 90941950 GGCCTATCATTCTTCTCAGATCTGGTACTAAAAGCAGTGGTTTCTGCCCAGGTGTCTATGACAAGAGGAAAATAACAGCTATAT-AACCGTTATCTCAGAAAGATAAGAAGACAACACTGGATTTAAAATCATCTAggatcaact i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18586892 144 + 33263144 GGCCTATCATTCTTCTCAGATCTGGTACTAAAAGCAGTGGTTTCTGCCCAGGTGTCTGTGACAAGAGGAAAATAACAGCTATAT-AACTGTTATCTCAGAAAGATAAGAAGACAACACTGGATTTAAAATCATCTAGGATCAACT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198285085 144 + 210400635 GCCCTATCCTTTTTTTCAGATTTGGTACTAAAAGCAGTGGTTTCTGACCAGCTGTCTGTGACAAGAGGAAAATAACAGCTATAT-AACCATTATCTCAGAAAGATAAGAGGACAACACTGGATTTAAAACCATCTGAGATCAATC i calJac3.chr1 C 0 C 0 s canFam3.chr10 40910637 117 - 69331447 GGCCGATCATTCTTCTCAGACTTTGTCCCGAAAGCAATGGTGGCTGCCT-GATGTCTGTGA-----------------CCCTAT----------CACAGACAGATAAAGACAGAACACCGGATTGAAGATCATCAAGAATCAATT i canFam3.chr10 C 0 I 397 e mm10.chr15 77135499 2198 + 104043685 I a score=305030.000000 s hg38.chr22_KI270876v1_alt 137066 117 + 263666 TTTTT-----AAAAAAATTAACTCTGTAGAAGA---ACAGACCAGGAAAATCCAGATAAATAAATCAGAT----AAACACA--------TACAAAGACAAAACAATGCTCATTTGCAAGACTTAAAGCAAAATTACT- s panTro4.chr22 34514490 117 + 49737984 TTTTT-----AAAAAAATTAACTCTGTAGAAGA---ACAGACCAGGAAAATCCAGATAAATAAATCAGAT----AAACACA--------TACAAAGACAAAACAATGCTCATTTGCAAGACTTAAAGCAAAATTACT- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30931006 121 + 46535552 TTTTT-----AAAAAAATTAACTCTGTAGAAGA---ACAGACCAGGAAAATCCAGATAAGTAAAACAGATAAACAAACACC--------TACAAAGACAAAACAATGCTCATTTGCTAGACTTAAAGCAAAATTACT- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100481814 120 - 115148730 TTTTT------TTTAAATTAACTCTGTAGAAGA---ACAGACCAAGAAAATCCAGATAAATAAAATGGATAAACAAACACA--------TATAAAGACAAAACAATGCTCATTTGCTAGACTTAAAGCAAAATTACT- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80634533 116 + 95678458 TTTTT----TAAAAAAAGTAACTCTGTAGAAGA---ACAGACCAAGAAAATCCAGACAAACAAAATGGATAAACAAAC--------------AAAGACAAAACAATGCTCATTTGCTAGACTTAAAGCAAAATTACT- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81060933 116 - 96509753 TTTTT----TAAAAAAAGTAACTCTGTAGAAGa---acagaccaagaaaatccagacaaacaaaatggataaacaaac--------------aaagacaaaacaaTGCTCATTTGCTAGACTTAAAGCAAAATTACT- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76318523 116 + 90941950 ttttt----ttaaaaaagtaactctGTagaaga---acagaccaagaaaatccagacaaacaaaatggataaacaaac--------------aaagacaaaacaatgcTCATTTGCTAGACTTAAAGCAAAATTACT- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18587036 112 + 33263144 TTTTT----AAAAAAAAGTAACTCTGTAGAAGA---ACAGACCAAGAAAATCCAGACAAACAAAATGGAT----AAAC--------------AAAGACAAAACAATGCTCATTTGCTAGACTTAAAGCAAAATTACT- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198285229 102 + 210400635 TTTTA-----AAAAAAATTAA--CTGTAGA----------ACAAAGAAAATCCAAATGAATAAAAGGGAT----AAAC--------------AAACACAAAACAATGCTCATTTGCTAGACTTATAGCAAAATTACT- i calJac3.chr1 C 0 I 312 s canFam3.chr10 40911151 137 - 69331447 -tcttaaaaaaaaaaaaaaagttCTGTGGAATAATGACAGACCAAGATGACCTAGAGAAAAAAAAAACAACAACAAAAAAAAAAGAATGCACAAAGACCAAACAATGCACATTTACCAGACATACAGTAAAATTCATT i canFam3.chr10 I 397 C 0 e mm10.chr15 77135499 2198 + 104043685 I a score=238978.000000 s hg38.chr22_KI270876v1_alt 137183 98 + 263666 CTAGATTCTTAACTTACACAAATACTTAAAT--------------CCCAAATCTCCTTCCTTCAGTATCTAAAATATTCTCGttttttgttttgttttgttttgtttttA--AG s panTro4.chr22 34514607 107 + 49737984 CTAGATTCTTAACTTACACAAATACTTAAATTTAACAGTGCTACCCCCAAATCTCCTTCCTTCAGTATCTAAAATATTCTCGTT-----TTTTGTTTTGTTTTGTTTTTA--AG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30931127 107 + 46535552 CTAGATTGTTAACTTACACAAATACTTAAATTTAACAGTGCTACCCCCAAATCTCCTTCCTTCAGTATCTAAAATATTCTGGTT-----TTTTGTTTTGTTTTGTTTTTA--AG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100481934 107 - 115148730 CTAGATTCTTAACTTACACAAATACTTAAATTTAACAGTGCTACCCCCAAATCTCCTTCCTTCAGTATCTGAAATTTTCTGGTT-----TTTTGTTTTGTTTTGTTTTTA--AG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80634649 92 + 95678458 CTAGATTCTTAACGTGTACAAATACTTAAAC-----AGTGCTACCCCCAAATTTCCTTCCTTCAGTATCTAAAATATTCTGGTT-----C----------TTTTTTTTTA--AG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81061049 92 - 96509753 CTAGATTCTTAACGTGTACAAATACTTAAAC-----AGTGCTACCCCCAAATTTCCTTCCTTCAGTATCTAAAATATTCTGGTT-----C----------TTTTTTTTTA--AG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76318639 94 + 90941950 CTAGATTCTTAACGTGTACAAATACTTAAAC-----AGTGCTACCCCCAAATCTCCTTCCTTCAGTATCTAAAatattctggtt-----c-t-------tttttttttta--ag i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18587148 95 + 33263144 CTAGATTCTTAACGTGTACAAATACTTAAAC-----AGTGCTACCCCCAAATCTCCTTCCTTCAGTATCTAAAATATTCTGGTT-----CTT-------TTTTTTTTTTA--AG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198285643 94 + 210400635 ccAGATTCTTAATTTACATAAATACTTAAATTTAACAGTGCTTCCCCTAAATCTCCTTCCTTCAGTATCTAAAATACTTTGTTT-----T-------------TTTTTAA--AG i calJac3.chr1 I 312 C 0 s canFam3.chr10 40911288 104 - 69331447 CTAGAGTCTTCATTTACTTACATATGTAAAA----CAAGGCCAA-CCCAAATCTATGTGCATTGGTATTTGAAATACTCTGTAT-----TGAAAACAAACATCCCTTTCACCAG i canFam3.chr10 C 0 C 0 e mm10.chr15 77135499 2198 + 104043685 I a score=374149.000000 s hg38.chr22_KI270876v1_alt 137281 114 + 263666 TCTAAAGACAACCAAG----CTATTGAACTGTTCTTAAC-----T------TTTTTTTTAAACTACC-----ATAACCTAGAGG-AGAGCTGTAGGGTAGAATTGTTTTGCTTTTCTCACCTCAAGAAAGTTTCA s panTro4.chr22 34514714 114 + 49737984 TCTAAAGACAACCAAG----CTATTGAACTGTTCTTAAC-----T------TTTTTTTTAAACTACC-----ATAACCTAGAGG-AGAGCTGTAGGGTAGAATTGTTTTGCTTTTCTCATCTCAAGAAAGTTTCA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30931234 114 + 46535552 TCTAAAGACAACCAAG----CTATTGAACTGTTCTTAAC-----T------TTTTCTTTAAACTACC-----ATAAGCTAGAGG-AGAGCTGTAGGGTAGGATTGTTTTGCTTTTCTCACCTCAAGAAAGCTTCA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100482041 115 - 115148730 TCTAAAGACAACCAAG----CTATTGAACTGTTCTTAAC-----T------TTTTCTTTAAACTACC-----ATAACCTAGAGGAAGAGCTGTAGGGTAGGATTGTTTTGCTTTTCTCACCTCAAGAAAGTTTCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80634741 115 + 95678458 TCTAAAGACAACCAAG----CTATTGAACTATTCTTAAC-----T------TTTTCTTAAAACCACC-----ATAACCTAGAGGAAGAGCTATAAGGTAGGATTGTTTTGCTTTTCTTACCTCAAGGAAGTTTCC i rheMac3.chr10 C 0 I 187 s macFas5.chr10 81061141 115 - 96509753 TCTAAAGACAACCAAG----CTATTGAACTATTCTTAAC-----T------TTTTCTTAAAACCACC-----ATAACCTAGAGGAAGAGCTATAAGGTAGGATTGTTTTGCTTTTCTTACCTCAAGGAAGTTTCC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76318733 115 + 90941950 tctaaagAAAACCAAG----CTATTGAACTATTCTTAAC-----T------TTTTCTTAAAACCACC-----ATAACCTAGAGGAAGAGCTATAAGGTAGGATTGTTCTGCTTTTCTCACCTCAAGGAAGTTTCA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18587243 115 + 33263144 TCTAAAGACAACCAAG----CTATTGAACTATTCTTAAC-----T------TTTTCTTAAAACCACC-----ATAACCTAGAGGAAGAGCTATAAGGTAGGATTGTTTTGCTTTTCTCACCTCAAGGAAGTTTCA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198285737 115 + 210400635 TCTAAAGACAGCCAAG----CTATTGAACTGCTCTTAAC-----T------TTTTCTTTAAACTACC-----ATAACCCAGAGGAAGAGCTATAGGGTAGGACTGTTTTGCTTTTCTCATCTCAAGGAAGTTTCA i calJac3.chr1 C 0 C 0 s mm10.chr15 77137697 120 + 104043685 TCTGAAATCAGTCAAATTACCTAATATACTCTTCATATT-----TTATTTATTTTCTTATAACTGCC--TGAAAAATGTAGAGGTAGAGGCTGGAAACATGGTTTCCTTGCCAATATCA--------AAGTTCCA i mm10.chr15 I 2198 C 0 s canFam3.chr10 40911392 128 - 69331447 TCTAAAAACAGTCAGATTATCTATTATACTCTTGGTGTCACCTTT------TGTTCTTCAAAGGACCACATAATGACCTGGAGGGAGGGCTGTTAAATAAAAGCGTTCC-CATTTCTCCTCTGAACTGAGTTTCA i canFam3.chr10 C 0 C 0 a score=1611452.000000 s hg38.chr22_KI270876v1_alt 137395 482 + 263666 CAATTTTGAGCACCCAGAGCAGACAAAA-GTGTTAAGTGTCTAATAATCCTGAATACATTTCTGG---------TAAG--TTAGGTAAAAGTAATACATTTTCTCTTTTACAATACATCTGAACTACACTCAGAGCCATAAGATGTTAGGCAACTTGTAGGTAAATGTGATGTTGAGAGGAAAAATCTATACAATGAA---ATCTCCATGTAGTCTCCAAATATTTACCTTCAGGTTGAATTCTAAG--AGTTCGCTTTTC---ACTTGGTTGTCTGGAACTT----ACTGAATGGCCAAGATCCCAAGGAAGCTCATGGAAACAGATTCAATGATTATATAATAAGGATTACTGTAAT-AAAAACC---------AATCGCC-ATTGAAGTATT-AGTTTAAGAAAAAAA---TGTCTAATTTCGGGTAAGGAGTTCA--GACACACCCATTCCTGCTTCAGTCTCAACAGTAAGAT--------------GCAGTAAGAAACTACTTCCATACAACCCAGCT-CCTCACACCTACC s panTro4.chr22 34514828 483 + 49737984 CAATTTTGAGCACCCAGAGCAGAAAAAA-GTGTTAAGTGTCTAATAATCCTGAATACATTTCTGG---------TAAG--TTAGGTAAAAGTAATACATTTTCTCTTTTACAATACATCTGAACTACACTCAGAGCCATAAGATGTTAGGCAACTTGTAGGTAAATGTGATGTTGAGAGGAAAAATCTATACAATGAA---ATCTCCATGTAGTCTCCAAATATTTACCTTCAGGTTGAATTCTAAG--AGTTCGCTTTTC---ACTTGGTTGTCTGGAACTT----ACTGCATGGCCAAGATCCCAAGGAAGCTCATGGAAACAGATTCAATGATTATATAATAAGGATTACTGTAATAAAAAACC---------AATCACC-ATTGAAGTATT-AGTTTAAGAAAAAAA---TGTCTAATTTCGGGTAAGGAGTTCA--GACACACCCATTCCTGCTTCAGTCTCAACAGTAAGAT--------------GCAGTAAGAAACTACTTCCATACTACCCAGCT-CCTCACACCTACC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30931348 484 + 46535552 CAATTTTGAGCACCCAGAGCAGAAAAAA----TTAAGTGTCTAATAATCCTGAATACATTTCTGG---------TAAG--TTAGGTAAAAGTAATACATTTTCTCTTTTACAATACATCTAAACTACACTCAGAGCCATAAGATGTTAGGCAACTTGTAGGTAAATTTGATGTTGAGAGGAAAAATCTATACAATGAA---ATCTCCATGTAGTCTCCAAATATTTACCTTCAGGTTGAATTCTAAG--AGTTCGCTTTTC---ACTTGGTTGTTTGGAACTT----ACTGAATGGCCAAGATCCCAAGGAAGCTCATGGAAACAGATTCAATGATTATATAATAAGGATTACTGTAATAAAAAACC---------AATCGCC-ATTGAAGTATTAAGTTTAAGAAAAAAATGTTGTCTAATTTCGGGTAAGGAGTTCA--GACACATCCATTCCTGCTTCAGTCTCAACAGTAAGAT--------------GCAGTAAGAAACTACTTCCATACTACCCAGCT-CCTCACACCTACC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100482156 486 - 115148730 CAATTTTGAGCACCCAGAGCAGAAAAAA-GTGTT-AGTGTCTAATAATCCTGAATACATTTCTGG---------TAAG--TTAGGTAAAAGTAATACATTTTTTCTTTTACAGTACATCTAAACTACACTCAGAGCCATAAGATGTTAGGCAACTTGCAGGTAAATTTGATATTGAGAGGAAAAATCTATACAATGAA---ATCTCcatgtagtctccaaatatttaccttcaggttgaattctaag--agttcgcttttc---acttggttgtttggaactG----ACTCAATGGCCAAGATCCCAAGGAAGCTCATGAAAACAGATTCAATGATTACATAATAAAGATTACTGTAATAAAAAACC---------AATCGCC-ATTGAAGTATTAAGTTTAAGAAAAAAATGTTGTCTAATTTTGGGTAAGGAGTTCA--GACACATCCATTCCTGCTTCAGTCTCAACAGTAAGAT--------------GCAGTAAGAAACTACTTCCATACTACCCAGCT-CCTCACACCTACC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80635043 485 + 95678458 CAATTTTAAGTACCCAGAGCAGAAAAAA-GTGTT-AGTGTCTAATAATCCTGAATACATTTCTGG---------TAAG--TTAGGTAAAAGTAATACATTTTCTCTTTTACAATACATATAAACTACACTCAGAGCCATAAGATGTTAGGCAACTTGTAGGTAAATTTGATGTTGGGAGGAAAAATCTACACAATGAA---ATCTCCATGTACTCTCCAAATATTTACATTCAGGTTGAATTCCAAG--AATTCGCTGTTC---ACTTGGTTGTCTGGAACTT----ACTGAATTGCCAAGATCCCAAGGAAGCTCATGGAAACAAATTCCATTATTATATAATAAGGATTACTGTAATAAAAAACC---------AATCGCC-ATTGAAGTATTAAGTTTAAGAAAAAAT-GTTGTCTAATTTTGGGTAAGGAGTTCA--GACACATCCATTCCTGCTGCAGTCTCAACAGTAAGAT--------------GCAGTAAGAAACTACTTCCATAATACTCAGCT-CCTCACACCTATC i rheMac3.chr10 I 187 C 0 s macFas5.chr10 81061256 485 - 96509753 CAATTTTAAGTACCCAGAGCAGAAAAAA-GTGTT-AGTGTCTAATAATCCTGAATACATTTCTGG---------TAAG--TTAGGTAAAAGTAATACATTTTCTCTTTTACAATACATATAAACTACACTCAGAGCCATAAGATGTTAGGCAACTTGTAGGTAAATTTGATGTTGGGAGGAAAAATCTACACAATGAA---ATCTCCATGTACTCTCCAAATATTTACATTCATGTTGAATTCCAAG--AATTCGCTGTTC---ACTTGGTTGTTTGGAACTT----ACTGAATTGCCAAGATCCCAAGGAAGCTCATGGAAACAAATTCCATTATTATATAATAAGGATTACTGTAATAAAAAACC---------AATCGCC-ATTGAAGTATTAAGTTTAAGAAAAAAT-GTTGTCTAATTTTGGGTAAGGAGTTCA--GACACATCCATTCCTGCTGCAGTCTCAACAGTAAGAT--------------GCAGTAAGAAACTACTTCCATAATACTCAGCT-CCTCACACCTATC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76318848 485 + 90941950 CAATTTTGAGTATCCAGAGCAGAAAAAA-GTGTT-AGTGTCTAATAATCCTGAATACATTTCTGG---------GAAG--TTAGgtaaaagtaatacattttctcttttacaatACATCTAAACTACACTCAGAGCCATAAGATGTTAGGCAACTTGTAGGTAAATTTGATGTTGGGAGGAAAAATCTACACAATGAA---ATCTCCATGTACTCTCCAAATATTTACATTCAGGTTGAATTCCAAG--AATTCGCTGTTC---ACTTGGTTGTCTGGAACTT----ACTGAATTGCCAAGATCCCAAGGAAGCTCATGGAAACAAATTCCATTATTATATAATAAGGATTACTGTAATAAAAAACC---------AATCGCC-ATTGAAGTattaagtttaagaaaaaat-gttGTCTAATTTTGGGTAAGGAGTTCA--GACACATCCATTCCTGCTGCAGTCTCAACAGTAAGAT--------------GCAGTAAGAAACTACTTCCATAATACTCAGCT-CCTCACACCTATC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18587358 485 + 33263144 CAATTTTGAGTAGCCAGAGCAGAAAAAA-GTGTT-AGTGTCTAATAATCCTGAATACATTTCTGG---------TAAG--TTAGGTAAAAGTAATACATTTTCTCTTTTACAATACATCTAAACTACACTCAGAGCCATAAGATGTTAGGCAACTTGCAGGTAAATTTGATGTTGGGAGGAAAAATCTACACAATGAA---ATCTCCATGTACTCTCCAAATATTTACATTCAGGTTGAATTCCAAG--AATTCGCTGTTC---ACTTGGTTGTTTGGAACTT----ACTGAATTGCCAAGATCCCAAGGAAGCTCATGGAAACAAATTCCACTATTATATAATAAGGATTACTGTAATAAAAAACC---------AATCGCC-ATTGAAGTATTAAGTTTAAGAAAAAAT-GTTGTCTAATTTTGGGTAAGGAGTTCA--GACACAACCATTCCTCCTGCAGTCTCAACAGTAAGAT--------------GCAGTAAGAAACTACTTCCATAATACTCAGCT-CCTCACACCTATC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198285852 467 + 210400635 CAGTTTTGAGTAGCCAGAACAGAAAAAAAGTGTT-AGTGCCTAATAATCCTGAATACATTTCTGG---------CAAG--TTAGATCAAAGTAATACATTTTCTCTTTTACAATAAATTTAAACTACACTCAGAGCCCGAAGATGTTAGACAACTTGTAGGTAAATTTGACGTTGAGCGGAAAAATCTATACAATGAA---GTCTCC------------AATATTTACATTCAGGTTGAATTCTAAC--GGTTCGCTTTTC---AGTTGGTTGTTTGAAACTT----ACTGAATGGCCAAGATCCCAATGAAGCTCATGGAAACAGATTCAA--ATTATATAATAAGGATTACAGTAATAAAAAACC---------AATCACC-ACTGAAGTATT------AAGAGAAAAT-GTTGTCTAATTTTGGGTAAGGAGTTCA--TACACAGCTATTCCTGTTGCAGTCTCAACAGTAAGAT--------------GCAGTAAGAAACGATTTCCATAATACCCAGCTCCCTCACACCTACC i calJac3.chr1 C 0 C 0 s mm10.chr15 77137817 453 + 104043685 CAGCT---GATACACACAGTGGAA-----GTGCT-GGTGTCTAATTCT----AAAATATTTCTGG---------TAAACCTTAGAGAAGGGTAAT--------TCTT--------------------ACCCAAAGATGTAAGATATTAGGTAACCTGAAGA----------GCTTTGGAGGCATACCTA-AAGACGGT---GTCTCCATAAAATTT---AATTTTTATATCTGGGTGAAAAACCCAGTTTGTTTGTTTTTTTAAACTTAGTT-TTTGTTACTTGGTAAATAGATAGCCAGGATCCTTAAAAGGTTCACAATATCAGATGAAATGATTATATAATAAAACGTCTACCAACAGAAGACCACTTAACAGAATTATA-ATTTAATTATTACCACTTAACGGAATT-ATAATTTAATTTCAACCAAGG-------------ATCTTTGCCTGCTGTGTTTATAAGAGTTAGCTAGAACACTGACCCAGAGGTCAGGAACCAGTGACACAC-ACATAGCT-CTCCACTCCCACC i mm10.chr15 C 0 I 202 s canFam3.chr10 40911520 493 - 69331447 -CTCTCTGAACACCTAGAGCTGAAA----GTGTT-AGTATCTAATAGTCCTGAAAATATTTCTGGTAGTAAAAATAAG--TTAGCTAAAAATCATGTGCTTTCTAGTTAACAGTGAATATAAATCATACCCAGAGCGGTAAGATGTCAGACAATCTGCAGGT-AATAAAAAAATGGAGGGAAAAGCCTATCCATAGAATCTATCTCCCTGTAGCTTCCAGGT-TTTGTGTTCAGGTTCAATTTGAAC--AGTTCGTTCTTC---ATTTGGTTGTCTGTGACTG----AGTAGATGGCTAGGGTCCCAAGGAAGTTCACAGCAACCGATTTAATGGCTGTATGATAATGATTATAGTAATAAAAAGCC---------CATCACCAACTGAAATATTAAATTTAAGGGAAAGT-ATTATCTGATTCCACGAAGAGAATCTAGGGACACATCTATTGCTGCTACACTCTCAA---TAAGAT----CACTCATC--CCATGTGGTACCCACTTC------ATTCTGCC-TCACACACCCACA i canFam3.chr10 C 0 C 0 a score=1825045.000000 s hg38.chr22_KI270876v1_alt 137877 636 + 263666 AACTCATCTTTTACCTTGTTCTTTGAAAGCAAAGATGACcatattttattgcgtataacacccattcagggaacatatttaaaaatgcacatg-----------------tcaagatcctttccccatagattaggattcagtgggtt-ggaaca-ggaccctggtacttacTGGTGTAGATGGTTTGGGTCCCACATTCTGAGAAACACTGACTTAGAGGCTTTGGCTGGCAAAATGGGAGAGAATTATGGTTACAGCA--TGCCTCCAGGACATGTCCT-GAAGCATCTACACCTTTAGAAGAACAGAGTCAGTTAAGAGATTAAAGAGGGCATAGAggctaggccccatggctcccaaggtaattcc-agcaccttgggagg-ctgaggcatgcagatcacatgaggtcaggagttcaagaccagcctggccaacgtggtgaaactccatctctactaaaaatacaaaaacagccaggtgtgatggtgcacgtctgtaatcccagctacctgggaggctgaagcacgagaatcacttgaacatcggaggcagaggttgcagtgagccaagatcgcgccactgcactccagcctggacaacagagtaagactttgtctcaaaataa-------------ataaataaataaataaataaataaataaaAAG s panTro4.chr22 34515311 624 + 49737984 AACTCATCTTTTACCTTGTTCTTTGAAAGCAAAGATGACcatattttattgcgtataacacccattcagggaacatatttaaaaatgcacatg-----------------tcaagatcctttccccatagattaggattcagtgggtt-ggagca-ggaccctggtacttacTGGTGTAGGTGGTTTGGGTCCCACATTCTGAGAAACACTGATTTAGAGGCTTTGGCTGGCAAAATGGGAGAGAATTATGGTTACAGCA--TGCCTCCAGGACATGTCCT-GAAGCATCTACACCTTTAGAAGAACAGAGTCAGTTAAGAGATTAAAGAGGGCATAGAggctaggcgccatggctcccaaggtaattcc-agcaccttgggagg-ctgaggcatgcagatcacatgaggtcaggagttcaagaccagcctggccaacgtggtgaaactccatctctactaaaaatacaaaaacagccaggtgtgatggtgcacgcctgtaatcccagctacttgggaggctgaagcacgagaatcacttgaacatcggaggcagaggttgcagtgagccaagatcgcgccactgcactccagcctggacaacagagtaagactttgtctca-------------------------aaaaaaataaataaataaataaaaaG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30931832 632 + 46535552 AACTCATCTTTTACCTTGTTCTTTGAAAGCAAAGATGTCcatattttattgcgtataacacccactcagggaacatatttaaaaatgcacatg-----------------tcaagatccttttcccatagattaggattcagtgggtt-ggagca-ggaccctggtacttacTGGTGTAGGTGGTTTGGGTCCCACATTCTGAGAAACACTGATTTAGAGGCTTTGGCTGGCAAAATGGGAGAGAATTATGGTTACAGCA--TGCCTCCAGGACATGTCCT-GAAGCATCTACACCTTTAGAAGAACAGAGTCAGTTAAGAGATTAAAGAGGGCATAGAggctaggtgccatggctccctaggtaattccaagcaccttgggagg-ctgaggcatgcggatcacatgaggtcaggagttcaagaccagcctggccaacgtggtgaaaccccatctctactaaaaatacaaaaacagccaagtgtgatggtgcacgcctgtaatcccagctacttgggaggctgaagcacgagaatcacttgaacatcggaggcagaggttgcagtgagccaagatcacgccactgcactccagcctggacaacagagtaagactttgtctca-----a-------------aaaaataaataaataagtaaataaataaaAAG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100482642 638 - 115148730 AACTCATCTTTTACCTTGTTCTTTGAAAGcaaagatgcccatattttattgcatataacacccactcagggaacatatttaaaaatgcacatg-----------------tcaagatcctttccccatagattaggattcagtgggtt-gcagca-ggaccctggtacttacTGGTGTAGGTGGTTTGGGTCCCACATTCTGAGAAACACTGATTTAGAGGCTTTGGCTGGCAAAATGGGAGAGAATTATGGTTGCAGCA--TGCCTCCAGGACATGTCCCAAAAGCATCTACACCTTTAGAAGAACAGAGTCAGCTAAGAGATTAAAGAGGGCATAGAggctaggcgccgtggctcccaaggtaattcc-agcaccttgggaggcccgaggcatgcggatcacatgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaacagccaggtgtgatggtgtacgcctgcaatcccagctacttgggaggctgaagcacgagaatcacttgaacatcggaggcagaggttgcagtgagccaagatcgtgccactgcactccagcctggacaacagagtaagaccttgtctcaaaataa-------------ataaataaataaataaataaataaataaataa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80635528 629 + 95678458 AACTCATCTTTTACCTTGTTCTTTGAAAAAAAAGATGCCCCTATTTTATtgcatataacacccactcaaggaacatatttagaaatgcacatg-----------------tcaagatcctttccccatagattaggattcagtaggtt-ggagcagggaccctggTACTTACTGGTGTAGGTGGTTTGGGTCCCACATTCTGAGAAACACTGATTCAGAGGCTTTAGCTGGCAAAATAGGAGAGAATTATGGTTGCAGCA--TGCCTCCAGGACATGTCCT-GAAGCATCTACACCTTTAGAAGAACAGAGTCAGTTAAGAGATTAAAGAGGGCATAGAggccaggtgcagtggctcccaaggt-atccc-aacaccttggga-g-ccgaggcatgcggatcacatgaggtcaggagttcaagaccagcctggccaatatggtgaaaccccgtctctactaaaattacaaaaatagccaggtgtgacggcacatgcctgtaatcctagctacttgggaggctgaagcatgaggatcacttgaacatcggaggcagaggttgcagtgagccaggatcgtgccactgcactccagcctagacaatagggtaagactttgtctcaaaaaaa-------------------aaaaaaaaaaaaaaaaagaaaagaaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81061741 633 - 96509753 AACTCATCTTTCACCTTGTTCTTTGAAAAAAAAGATGCCCCTATTTTATTGCATATAACACCCACTCAAGGAACATATTTAGAAATGCACATG-----------------TCAAGATCCTTTCCCCATAGATTAGGATTCAGTAGGTT-GGAGCAGGGACCCTGGTACTTACTGGTGTAGGTGGTTTGGGTCCCACATTCTGAGAAACACTGATTTAGAGGCTTTAGCTGGCAAAATAGGAGAGAATTATGGTTGCAGCA--TGCCTCCAGGACATGTCCT-GAAGCATCTACACCTTTAGAAGAACAGAGTCAGTTAAGAGATTAAAGAGGGCATAGAggccaggtgcagtggctcccaaggt-atccc-agcaccttggga-g-ccgaggcatgcggatcacatgaggtcaggagttcaagaccagcctggccaatatggtgaaaccccgtctctactaaaattacaaaaatagccaggtgtgacggcgcatgcctgtaatcctagctacttgggaggctgaagcatgaggatcacttgaacatcggaggcagaggttgcagtgagccaggatcgcgccactgcactccagcctagacaacagggtaagactttgtctcaaaaaaa---------------aaataaataaataaaagaaaaGAAAAGAAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76319333 641 + 90941950 AACTCATCTTTTAccttgttctttgaaaaaaaagatgCCCCTATTTTATTGCATATAACACCCACTCAAGGAACATATTTAGAAATGCACATG-----------------TCAAGATCCTTTCCCCATAGATTAGGATTCAGTAGGTT-GGAGCAGGGACCCTGGTACTTACTGGTGTAGGTGGTTTGGGTCCCACATTCTGAGAAACACTGATTTAGAGGCTTTAGCTGGCAAAATGGGAGAGAATTATGGTTGCAGCA--TGCCTCCAGGACATGTCCT-GAAGCATCTACACCTTTAGAAGAACAGAGTCAGTTAAGAGATTAAAGAGGGcatagaggccaggtgcagtggctcccaaggt-atccc-agcaccttgggagg-ccaaggcatgcggatcacatgaggtcaggagttcaagaccagcctggccaatatggtgaaaccccgtctctactaaaattacaaaaatagccaggtgtgacggcgcatgcctgtaatcctagctacttgggaggctgaagcatgaggatcacttgaacatcggaggcagaggttgcagtgagccaggatcgcgccactgcactccagcctagataacagggtaagactttgtctcaaaaaaa--------aaaaaaaaaaaaaaaaaagaaaagaaaagaaaagaaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18587843 649 + 33263144 AACTCATCTTTTACCTTGTTCTTTGAAAAAAAAGATGCCCCTATTTTATTGCATGTAACACCCACTCAAGGAACATATTTAGAAATGCACATG-----------------TCAAGATCCTTTCCCCATAGATTAGGATTCAGTAGGTT-GGAGCAGGGACCCTGGTACTTACTGGTGTAGGTGGTTTGGGTCCCACATTCTGAGAAACACTGATTTAGAGGCTTTAGCTGGCAAAATGGGAGAGAATTATGGTTGCAGCA--TGCCTCCAGGACATGTCCT-GAAGCATCTACACCTTTAGAAGAACAGAGTCAGTTAAGAGATTAAAGAGGGCATAGAggccaggtgcagtggctcccaaggt-attcc-agcaccttgggagg-ccgaggcatgtggatcacatgaggtcgggagttcaagaccagcctggccaatatggtgaaaccccgtctctactaaaattacaaaaatagccaggtgtgacggcacatgcctgtaatcctagctacttgggaggctgaagcacgaggatcacttgaacatcggaggcagaggttgcagtgagccaggattgcgccactgcactccagcctagacaacagggtaagactttgtctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagaaaaagaaaagaaaagaaa i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198286319 611 + 210400635 AACTCATCTTTTACCTTCTTCCTTGAAAGCAAAGGTGCCCATATTTTATTGTGT----CACCCATTCAGGGAACATACTTAAAAATGCACATG-----------------TCAAGATCCATTCCCCGTAGATTAGGATTCAGTGGATT-GGAACT-GGGCCCTGGTACTTACTGGTACAGGTGGTTTGGGTCCCACACTCTGAGAAGCATTGATTTAGAGGCTTTGGCTGACAAAATGAAAGAGAACTATGGTTGCAGCA--TGCTTCCAGAAAACGCCCC-GAACCATCTACACCTTTAGCAGAACAGAGTAAGTTAAGAGATTAAAGAGGGCATAGAggccaggtgccctagctcccaaggtaatctt-agcagcttgggagg-tcaagacatacaaatcacatgaggtcgggagttcaagaccagcctggccaacatggtgaaacaatgtctctactaaaaatacaaaattagccaggtgtgatggcacacgcctgcaatcccagctacttgggaggctgaagcatgagaattgcttgaacacggaagacagaggttgcagtgagccaagatcatatcactgcacaccagcctg---aacagagtaagactttatctaaaaaaaa-------------------------------aaaaaaaaaaaaaa i calJac3.chr1 C 0 C 0 s canFam3.chr10 40912013 316 - 69331447 AAC---TCTTTTACCTGGTTCCTTGAGAATGGAGATTCCCAGATTTAACTGTGCATAACAATCACCCTGGGAACATGTTT----TTGTAGTTGTTGTTGTTGTTTTTAAATCCATATCCTTTCTCCACAGATTATGATTCAGTGCGTTGGGAGTAAGGGCCCTGAGTCCTCCAGGTATAGGTAGTTTGGG----AAACAGGAAGAAACACTG----AGAGGCTTT-GCTGGCATAATGAGAAAGAATTGTGGTGATGGTAGGTACCTCCAGAAAGTGGCCT-GAAGCATCT--------------------------------------------------------------------------ATACT-----TCTAGGAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGAAGAGATTACAGAGGG--AGGA-----------------AGCC------------------------------------------------------------------------------ i canFam3.chr10 C 0 C 0 e mm10.chr15 77138270 202 + 104043685 I a score=525291.000000 s hg38.chr22_KI270876v1_alt 138513 161 + 263666 AGAG-----------------CATAGATGATGAGAGGAAGGCAACAGTGGCTATAAATGTAAGTTTCCTAAAAGTAGAGGGTTACCTTCTTATATGGAACCTGCAGCTAAGAGAATAAACACTAGTTGTTTTCTAAAGTGCAAATCTACTGAAATGTAGGCCTCACAATGGATCCTTC s panTro4.chr22 34515935 161 + 49737984 AGAG-----------------CATAGATGATGAGAGGAAGGCAACAGTGGCTATAAATGTAAGTTTCCTAAAAGTAGAGGGTTACCTTCTTATATGGAACCTGCAGCTAAGAGAATAAACACTAGTTGTTTTCTAAAGTGCAAATCTACTGAAATGTAGGCCTCACAATGGATCCTTC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30932464 161 + 46535552 AGAG-----------------CATAGATGATGAAAGGAAGGCAACAGTGGCTATAAATGTAAGTTTCCTAAAAGTAGACGGTTACCTTCTTATATGGAAGCTGCAGCTAAGAGAATAAACACTAGTTGTTTTCTAAAGTGCAAATCTACTGAAATGTAGGCCTCACAATGGATCCTTC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100483280 161 - 115148730 ataG-----------------CACAGACGATGAGAGGAAGGTGACAGTGGCTATAAATGTAAGTTTCCTAAAAGTAGAGGGTTACCTTCTTATATGGAACCTGCAGCTAAGAGAATAAAAACTAGTTGTTTTCTAAAGTGCAAATCTACTGAAATGTAGGCCTCACAATGGATCCTTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80636157 177 + 95678458 aaag-aaaaaaaaGGCAGGGGCATAAATGATGAGAGGAAGGTAACGGTGGCTATAAATGTAAGTTTCCTAAAAGTAGAGGGTTACCTTCTTATATGGAACCTACAGCTAGGAGAATAAACACTGGTTGTTTTCTATAGTGCAAATCTACTGAAACGTAGGCCTCACAACGGATCCTTC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81062374 177 - 96509753 AAAG-AAAAAAAAGGCGGGGGCATAAATGATGAGAGGAAGGTAACGGTGGCTATAAATGTAAGTTTCCTAAAAGTAGAGGGTTACCTTCTTATATGGAACCTACAGCTAGGAGAATAAACACTGGTTGTTTTCTATAGTGCAAATCTACTGAAACATAGGCCTCACAACGGATCCTTC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76319974 178 + 90941950 aaagaaaaaaaaaggcgggggcaTAAATGATGAGAGGAAGGTAATGGTGGCTATAAATGTAAGTTTCCTAAGAGTAGAGGGTTACCTTCTTATATGGAACCTACAGCTAGGAGAATAAACACTGGTTGTTTTCTATAGTGCAAATCTACTGAAACGTAGGCCTCACAACGGATCCTTC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18588492 177 + 33263144 aaag-aaaaaaaaGGCGGGGGCATAAATGATGAGAGGAAGGTAACGGTAGCTATAAATGTAAGTTTCCTAAAATTAGAGGGTTACCTTCTTATATGGAACCTACAGCTAGGAGAATAAACACTGGTTGTTTTCTATAGTGCAAATCTACTGAAACGTAGGCCTCACAATGGATCCTTC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198286930 149 + 210400635 aaGG-----------------CATAGATTATGAGAAGAAGGTAACAGTGGCCATAAATCTAAGTTTCCTAAAAGTAGAGGGTTACCTTCTTATATGGAACCTACATC--------TGAACACTA---GTTTTCTAAAATGCAAATCTACTGAAATG-AAGCTTCACAACGGATCCTTC i calJac3.chr1 C 0 C 0 s mm10.chr15 77138472 140 + 104043685 AGAG-----------------CGATGGCTGTAAGAGGAAGGTGGCAGCAGCTGCAAAAGCACACTGCCTGCAAATAGAGGGCCAACTTCTCA-ATGGTGCCTACAG----AGGGAGAGGCACTACCTTTCCCCAAAAGTGC------ACTAAACAGCAG---TTCCAACTG------- i mm10.chr15 I 202 C 0 s canFam3.chr10 40912329 138 - 69331447 -----------------------------AGGAGAGGAAGGTAATAGTGGCCACAAATGTAAATTACCTGAAAGCAGAGGG--ACCTTCTCATATGGAACTCACAGGCAAGAGAATCAACACTAGTTTGTTTT--AAATGCAAACCTACTAAAGTACAAGCCT---AATGGTCC---- i canFam3.chr10 C 0 C 0 a score=448551.000000 s hg38.chr22_KI270876v1_alt 138674 170 + 263666 TTTTAGCGTGGG-TATAACTAAAGAAT---CAGGACCAA---AAG-ATGAGTGTGCTGCAGTCATGTAAGGGGGCGTTGGAATTCAGGAACACGACCAGTACAATCTTGAGCTC-TTATAAACAGACAATTAATAAAATAAA--TTTTTAAAAAACCAGGCAATACAATATAAATCCTTGC s panTro4.chr22 34516096 170 + 49737984 TTTTAGCGTGGG-TATAACTAAAGAAT---CAGGACCAA---AAG-ATGAGTGTGCTGCAGTCATGTAAGGGGGCGGTGGAATTCAGGAACACGACCAGTACAATCTTGAGCTC-TTATAAACAGACCattaataaaataaa--ttttttaaaaaCCAGGCAATACAATATAAATCCTTGC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30932625 170 + 46535552 TTTTAGCGTGGG-TATAACTAAAGAAT---CAGGACCAA---AAG-ATGAGTGTGCTACAGTCATGTAAAGGGGCGATGGAATTTAGGAACATGACCAGTACAATCTTGAGCTC-TTATAAACAGACaattaataaaataaa--tttttaaaaaaCCAGGCAATACAATATAAATCCTTGC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100483441 170 - 115148730 TTTTAGCATGGG-TATAACCAAAGAAT---CAGGACCAA---AAG-ATGAGTGTGCTACGGTCATGTAAAGGAGCGATGGAATTCAGGAACATGACCAGTACAATCTTGAGCTC-TTATAAACAGACAATTAATAAAATAAA--TTTTTAAAAAACCAGGCAATACAATATAAATCCTTGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80636334 172 + 95678458 TTTTAGCATGGG-TATAACTAAAGAAT---CAGGACCAA---AAG-ATGAGTGTGCTACAGCCATGTAAAGGGGAGACAGAATTCAGGAACATGACCATTACAGTCTTGAGCTC-TTATAAACAGACaattaataaaataaattttttttaaaaaCCAGGCAATACAATATACATCCTTGC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81062551 172 - 96509753 TTTTAGCATGGG-TATAACTAAAGAAT---CAGGACCAA---AAG-ATGAGTGTGCTACAGCCATGTAAAGGGGAGACAGAATTCAGGAACATGACCATTACAGTCTTGAGCTC-TTATAAACAGACAATTAATAAAATAAAATTTTTTTAAAAACCAGGCAATACAATATACATCCTTGC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76320152 172 + 90941950 TTTTAGCATGGG-TATAACTAAAGAAT---CAGGACCAA---AAG-ATGAGTGTGCTACAGCCATGTAAAGGGGAGACAGAATTCAGGAACATGACCATTACAGTCTTGAGCTC-TTATAAACagacaattaataaaataaattttttttaaaaaccaggcaATACAATATACATCCTTGC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18588669 172 + 33263144 TTTTAGCATGGG-TATAACTAAAGAAT---CAGGACCAA---AAG-ATGGGTGTGCTACAGCCATGTAAAGGGGAGATGGAATTCAGGAACATGACCATTACAGTCTTGAGCTC-TTATAAACAGACAATTAATAAAATAAATTTTTTTAAAAAACCAGGCAATACAATATACATCCTTGC i chlSab2.chr19 C 0 C 0 s mm10.chr15 77138612 149 + 104043685 TCTTAG--------AGAACCAAAGGACTGACTGGACCTAACTAAG-GTCAA-GTGCTGCTTCCGTGTGCAGCACTGAAGGAAGGCAG---------CAGAGCAGTCTCACACAC-TCGTACACAG----TTACTACAATAAA--------GATAAACGGGTAACATATTGCATCCTCCTGC i mm10.chr15 C 0 I 1 s canFam3.chr10 40912467 149 - 69331447 TTCAAGAATAGGTTATAACTAAAGCAC---CAGGACCCA---AAGCATGAGTGTGCTACAGCCACATGAAGGGGAGATGGGGTGCAGGAGGGGACTGAGTGTAATCCTGAGCTCATTATAAATAAAGAATAAATAAAA------------------CAGGAAATAC--------TTCATGC i canFam3.chr10 C 0 C 0 e calJac3.chr1 198287079 0 + 210400635 C a score=342350.000000 s hg38.chr22_KI270876v1_alt 138844 138 + 263666 TTAGAATACCAATAAATGACACAAGCTGGTATATGTAAATTTAAGGGCAGTTACAGGCTTGGCCAACAAGAATATTGTAAACTTGCCTCCAAATCACTTGTCA--------------acacacacacacacacacacacacacacacacaca s panTro4.chr22 34516266 152 + 49737984 TTAGAATACCAATAAATGATACAAGCTGGTATATGTAAATTTAAGGGCAATTACAGGCTTGGCCAACAAGAATATTGTAAACTTGCCTCCAAATCACTTGTCAacacacacacacacacacacacacacacacacacacacacacacacaca i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30932795 142 + 46535552 TTAGAATAACAATAAATGACAAAAGCTGGTATATGTAAATTTAAGGGCAGTTACAGGCTTGGCCAACAAGAATATTGTAAACTTGTCTCCAAATCACCTGTCA----------acacacacacacacacacacacagacacacacacacaca i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100483611 126 - 115148730 TTAGAATAACAATAAATGACAGAAGCTGGTATATGTAAATTTAAGGGCAGTTACAGGCTTGGCCAACAAGAATATTGTAAACTTGCCTCCAAATCACT--------------------------cacacacacacacacacacacacacaca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80636506 139 + 95678458 TTAGAATAACAATAAATGACAGAAGCTGGTATATGTAAATTTAAGGGCAGTTATAGGCTTGGTCAACAAGAATATTGTAAATTTGCCTCCAAATCACTTGTCTT-------------acacacacacacacacacacacacacacacacaca i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81062723 131 - 96509753 TTAGAATAACAATAAATGACAGAAGCTGGTATATGTAAATTTAAGGGCAGTTATAGGCTTGGTCAACAAGAATATTGTAAATTTGCCTCCAAATCACTTGTCTT---------------------acacacacacacacacacacacacaca i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76320324 129 + 90941950 TTAGAATAACAATAAATGACAGAAGCTGGTATATGTAAATTTAAGGGCAGTTATAGGCTTGGTCAACAAGAATATTGTAAATTTGCCTCCAAATCACttgtctt-----------------------acacacacacacacacacacacaca i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18588841 119 + 33263144 TTAGAATAACAATAAATGACAGAAGCTGGTATATGTAAATTTAAGGGCAGTTATAGGCTTGGTCAACAAGAATATTGTAAATTTGCCTCCAAATCACTTGTCTT---------------------------------ATACACACACACACA i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40912616 135 - 69331447 TTAGAATAAAAATAATTTAGAGGACCTGGCATATGCAAGTCTAAGGATAGATACAGGCTTGGCCAACAAACCTGCTACACACTCGTCTCCAAATCACTTGTCTT-----------------CAacacacacagacacacacacatacacaca i canFam3.chr10 C 0 C 0 e mm10.chr15 77138761 1 + 104043685 I e calJac3.chr1 198287079 0 + 210400635 C a score=601095.000000 s hg38.chr22_KI270876v1_alt 138982 174 + 263666 cCCCTCTTCTGAATTACTCAGAGGGAAAAGCCAGTCCGGTCTTT-CCCTTGAGGCTGAGTTTTGAAATCTCACAGCAATGAATATTTAAACAGGAAAATAAATATTTCAGAACAAAGTCATTCAAACCTATAGTCTATTAGGTGAAAAGCAACAAACCCTGTAATAGTCTTAATA s panTro4.chr22 34516418 174 + 49737984 cCACTCTTCTGAATTACTCAGAGGGAAAAGCCAGTCCGGTCTTT-CCCTTGAGGCTGAGTTCTGCAATCTCACAGCAATGAATATTTAAACAGGAAAATAAATATTTCAGAACAAAGTCATTCAAACCTATAGTCTATTAGGTGAAAAGCAACAAACCCTGTAATAGTCTTAATA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30932937 174 + 46535552 cCCCTCTTCTGAATTACTCAGAGGGAAAAGCCAGTCCAGTCTTT-CCCTTGAGGCTGAGTTTTGCAATCTCACAGCAATGAATATTTAAACAGGAAAATAAATATTTCAGAACTAAGTCATTCAAACCTATAGTCTATTAGGTGAAAAGCAACAAACCCTGTAATAGTCTTAATA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100483737 174 - 115148730 cCCCTCTTCTGAATTACTCAGAGGGAAAAGCCAGTCCGGTCTTT-CCCTTGAGGCTGAGTTTTGCAATCTCACAGCAATGAATATTTAAACAGGAAAATAAATATTTCAGAACAAAGTCATTCAAACCTATAGTCTATTAGATGAAAAGCAACAAACCCTGTAATAGTCTTAATA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80636645 174 + 95678458 cacCTCTTTTAAATTACTCAGAGGGAAAAGCCAGTTCGGTCTTC-CCCTTGAGGCTGAGTTTTACAATCTCACAGCAATGAATATTTAAACAGGAAAATAAATATTTCAGAACAAAGTCATTCAAACCTATAGTCTATTAGGTGAAAAGCAACAAACCCTGTAATAGTCTTAATA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81062854 174 - 96509753 cacCTCTTTTAAATTACTCAGAGGGAAAAGCCAGTTCGGTCTTC-CCCTTGAGGCTGAGTTTTACAATCTCACAGCAATGAATATTTAAACAGGAAAATAAATATTTCAGAACAAAGTCATTCAAACCTATAGTCTATTAGGTGAAAAGCAACAAACCCTGTAATAGTCTTAATA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76320453 174 + 90941950 cacctcttttAAATTACTCAGAGGGAAAAGCCAGTTCGGTCTTC-CCCTTGAGGCTGAGTTTTACAATCTCACAGCAATGAATatttaaacaggaaaataaatatttcagaacaaaGTCATTCAAACCTATAGTCTATTAGGTAAAAAGCAACAAACCCTGTAATAGTCTTAATA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18588960 174 + 33263144 CACCTCTTTTAAATTACTCAGAGGGAAAAGCCAGTTCGGTCTTC-CCCTTGAGGCTGAGTTTTACAATCTCACAGCAATGAATATTTAAACAGGAAAATAAATATTTCAGAACAAAGTCATTCAAACCTATAGTCTATTAGGTGAAAAGCAACAAACCCTGTAATAGTCTTAATA i chlSab2.chr19 C 0 C 0 s mm10.chr15 77138762 175 + 104043685 CCCGCCTTTTGACTTACTCCTACAGAAATGACAATACAAACTTCTCCCCCGAGGCTGAGTTTCTATCTCACACACCAATGAATATTTAAACAGTAAAATAAATATTTCAGAATAAAGCTATCTGAACCAATGGTCTCATAGATTTAAAGTGGCACACGCTGTCACAGTTTGAATG i mm10.chr15 I 1 C 0 s canFam3.chr10 40912751 172 - 69331447 cacCCCTTTCAAATTACTCAGA--GAAAAGCCAGCCTGACCTCT-CCCCCGAGGCTGAGTTCTGCCATCCCAAAGCAATGAATATTTAAACAGAAAAATAAATATTTCAGAACAAAGTCATTCAAACCAATAGTCTATTAGGTTAAAAATGAGAAACCCTATAATAGTCTTAATG i canFam3.chr10 C 0 C 0 e calJac3.chr1 198287079 0 + 210400635 C a score=59733.000000 s hg38.chr22_KI270876v1_alt 139156 13 + 263666 TTTCCAACCTCTT s panTro4.chr22 34516592 13 + 49737984 TTTCCAACCTCTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30933111 13 + 46535552 TTTCCAACCTCTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100483911 13 - 115148730 TCTCCAACCTCTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80636819 13 + 95678458 TCTCCAACCTCTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81063028 13 - 96509753 TCTCCAACCTCTT i macFas5.chr10 C 0 I 395 s papAnu2.chr10 76320627 13 + 90941950 TCTCCAACCTCTT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18589134 13 + 33263144 TCTCCAACCTCTT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198287079 13 + 210400635 TTTCCGACCTCTT i calJac3.chr1 C 0 C 0 s mm10.chr15 77138937 13 + 104043685 TCTCCAAACTCTC i mm10.chr15 C 0 C 0 s canFam3.chr10 40912923 13 - 69331447 TCTCCAACCTCTT i canFam3.chr10 C 0 C 0 a score=102503.000000 s hg38.chr22_KI270876v1_alt 139169 27 + 263666 AAAAGCTCTTTCCTCTATTTCTCCTTA s panTro4.chr22 34516605 27 + 49737984 AAAAGCTCTTTCCTCTATTTCTCCTTA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30933124 27 + 46535552 AAAAGCTCTTTCCTCTATTTCTCCTTA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100483924 27 - 115148730 AAAAGCTCTTTCCTCTATTTCTCCTTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80636832 27 + 95678458 AAAAGCTCTTTCCTCTATTTCTCCTTA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81063436 27 - 96509753 aaaaGCTCTTTCCTCTATTTCTCCTTA i macFas5.chr10 I 395 C 0 s papAnu2.chr10 76320640 27 + 90941950 AAAAGCTCTTTCCTCTATTTCTCCTTA i papAnu2.chr10 C 0 I 300 s chlSab2.chr19 18589147 27 + 33263144 AAAAGCTCTTTCCTCTATTTCTCCTTA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198287092 27 + 210400635 AAAAGCTCTTTCTGCTATTTCTCCTTA i calJac3.chr1 C 0 C 0 s mm10.chr15 77138950 25 + 104043685 AGAAGTTC--TCTTCCACCTCCCTTTT i mm10.chr15 C 0 C 0 s canFam3.chr10 40912936 25 - 69331447 AAAAGCTC--TCTTCCATACCTTCTGT i canFam3.chr10 C 0 C 0 a score=1166469.000000 s hg38.chr22_KI270876v1_alt 139196 330 + 263666 AACAAGTATTTAGAACCTCAAACATTCATGAATCATGTCTTCCACTGGCAACAACAGACAGCAAGAACTACTCTGGTTCAGC---TACCTGCTTCTTTGGAAATGGAAG---GCCCTT----ACAATTA--ATAGTTAACTGTCTGTTCTATTCAATGTAAATATTCTATTCCAATGGATTTACACAATCCATG-GAAAATTATTCTTTTTCTCAACCAAACTTTTCACTACAATCTAAATTAATTTA----TTATTTTGTCATCATGGACAATTAAGTTTGCATCTTCCATATG-CTAAACTGGAATAGCCTTAAAAATA-----ggccaggtggcattgctcacacctgta s panTro4.chr22 34516632 331 + 49737984 AAGAAGTATTTAGAACCTCAAACATTCATGAATCATGTCTTCCACTGGCAACAACAGACAGCAAGAACTACTCTGGTTCAGC---TACCTGCTTCCTTGGAAATGGAAG---GCCCTTA---ACAATTA--ATAGTTAACTGTCTGTTCTATTCAATGTAAATATTCTATTCCAATGGATTTACACAATCCATG-GAAAATCATTCTTTTTCTCAACCAAACTTTTCACTACAATCTAAATTAATTTA----TTATTTTGTCATCATGGACAATTAAGTTTGCATCTTCCATATG-CTAAACTGGAATAGCCTTAAAAATA-----ggccaggtggcattgctcacacctgta i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30933151 339 + 46535552 AAGAAGTATTTAGAACCTCAAACATTCATGAATCATGTCTTCCACTGGCAACAACAGACAGCAAGAACTACTCTGGTTCAGC---TACCTGCTTCCTTGGAAATGGAAG---GCCCTT----ACAATTA--ATAGTTAACTGTCTATTCTATTCAATGTAAATATTCTATTCCAATGGATTTACACAATCCATG-GAAAATTATTCTTTTTCTCAACCAAACTTTTCACTACAATCTAAATTAATCTATTATTTATTTTGTCATCATGGACAATTAAGTTTGCATCTTCCATATG-CTAAACTGGAATAGCCTTAAAAACAGTCACggccaggtggcattgctcacacctgta i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100483951 339 - 115148730 AAGAAGTATTTAGAACTTCAAATATTCATGAATCATGTCTTCCACTGGCAACAACAGACAGCAAGAACTACTCTGGTTCAGC---TACCTGCTTCCTTGGAAATGGAAG---CCCCTT----ACAATTA--ATAGTTAACTGTCTATTCTAGTCAATGTAAATATTCTATTCTAATGGATTTACACAATCCATG-GAAAATTATTCTTTTTCTCAACCAAACTTTTCACTACAATCTAAATTAATTTATTATTTATTTTGTCATCATGGACAATTAAGTTTGCATCTTCCATATG-CTAAACTGGAATAGTCTTAAAAATAGTCACggccaggtggcgttgctcacacctgta i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80636859 332 + 95678458 AAGAAGTATTTAGAACCTCAAACATTCATGAATCATGTCTTCCACTGGCAACAACAGACAGCAAGAACTACTCTGGTTCAGT---TACCTGCTTCCTTGGAAATGGAAG---GCCCTTACACACAATTA--ATAGTTAAATGTCTATTCTATTCAATGTAATCAGT-----------GATTTACACAATCTATG-GAAAATTATTCTTTTTCTCAACCACACTTTTCACTACAATCtaaattaatttattatttattttGTCATCATGGACAATTAAGTTTGCATCTTCCATATG-CTAAACTGGAATAGCCTTAAAAATAGTCACAgccaggtggggttgctcacacctgta i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81063463 332 - 96509753 AAGAAGTATTTAGAACCTCAAACATTCATGAATCATGTCTTCCACTGGCAACAACAGACAGCAAGAACTATTCTGGTTCAGT---TACCTGCTTCCTTGGAAATGGAAG---GCCCTTACACACAATTA--ATAGTTAAATGTCTATTCTATTCAATGTAATCAGT-----------GATTTACACAATCTATG-GAAAATTATTCTTTTTCTCAACCACACTTTTCACTACAATCTAAATTAATTTATTATTTATTTTGTCATCATGGACAATTAAGTTTGCATCTTCCATATG-CTAAACTGGAATAGCCTTAAAAATAGTCACAgccaggtggggttgctcacacctgta i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76320967 332 + 90941950 aagaagtatttAGAACCTCAAACATTCATGAATCATGTCTTCCACTGGCAACAACAGACAGCAAGAACTACTCTGGTTCAGT---TACTTGCTTCCTTGGAAATGGAAG---GCCCTTACACACAATTA--ATAGTTAAACGTCTATTCTATTCAATGTAATCAGT-----------GATTTACACAATCTAtg-gaaaattattctttttctcaaccACACTTTTCACTACAatctaaattaatttattatttattttgtcatcATGGACAATTATTTTGTCATCTTCCATATG-CTAAACTGGAATAGCCTTAAAAATAGTCACAGCCAGGTggggttgctcacacctgta i papAnu2.chr10 I 300 C 0 s chlSab2.chr19 18589174 332 + 33263144 AAGAAGTATTTAGAACCTCAAACATTCATGAATCATGTCTTCCACTGGCAACAACAGACAGCAAGAACTACTCTGGTTCAGT---TACCTGCTTCCTTGGAAATGGAAG---GCCCTTACACACAATTA--ATAGTTAAACGTCTATTCTATTCAATGTAATCAGT-----------GATTTACACAATCTATG-GAAAATTATTCTTTTTCTCAACCACACTTTTCACTACAATCTAAATTAATTTATTATTTATTTTGTCATCATGGACAATTAAGTTTGCATCTTCCATATG-CTAAACTGGAATAGCCTTAAAAATAGTCACAgccaggtggggttgctcacacctgta i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198287119 333 + 210400635 AAGCAGTATTTAGAACCTCAAACATTCATGAATCATGTCTTCCACCGGCATCAACAGACAGCAAGAACTACTCTGGTTCAGC---TACGTGCTTCCTTGGAAATGGAAG---ACCCTTACATACAATTA--ATAGTTAAATGTCTATTATATCCAATGTAATTGGT-----------GATTTACACAATCCATGAAAAAATTATTCTTTTTCTAAACCAAGCTTTTCACTACaatttaaattaatttattatttattttGTCATAATGGACAATTAAGTTTGCATCTTCTATATG-CCAAAATGGAATAGCCTTAAAAATAGTCACAgccagatgtggtggctcacacctgca i calJac3.chr1 C 0 C 0 s mm10.chr15 77138975 287 + 104043685 -CACAGCACTCAATA----------TCATGGATCATGCTTTCCATTAGCAACA--AGACCAC-----CGACTTTGGTTCTGCTGTTACCTGCCGC-TTGGAAACAGAAGCGTCTCCTCACCCTTTCCTT--AGGGTTACAAGGCTAGTCTTGTCAACATGAATGAT-----------GGTTTATGCAATCTATA-TATGAGTA-TCACTTTTTCAAACAAACTCCCCACTACAGTTTAGCTTA---------CTATTTTTTC---ATGGATAATTAACTTTACATCCTTCATATGTCAAAACTGGAATATTATTAGAAATAG--------------------TAACAACTCTG i mm10.chr15 C 0 C 0 s canFam3.chr10 40912961 296 - 69331447 AAGCAATATTTAGAACCTCAAACATCCATGAATCTCGTCTTCTACT---CACACGAGACAACAAGAAATACTCTGGTCCAGC---TACCTGATTCCTTGGAAATGAAGG---TCCCT-----ACAACCAACATGGTTGGTTGTCTATTCTAGTCAATAAAATT--------------GATTTATACAATTCATG-GGTGATTATTCTTTTTCTTAATCAAA-TTTTCAGCACAATTTAAATGAACTTACTCTTTATTTTGTCTTCATGGGCAATTAAGTTTGCATCTTCTCTATG-TCAAACTGCAATATCCTTGAAAAAAG--------------------------CTGTA i canFam3.chr10 C 0 C 0 a score=14166.000000 s hg38.chr22_KI270876v1_alt 139526 4 + 263666 atcc s panTro4.chr22 34516963 4 + 49737984 atcc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30933490 4 + 46535552 atcc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100484290 4 - 115148730 aacc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80637191 4 + 95678458 atcc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81063795 4 - 96509753 atcc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76321299 4 + 90941950 atcc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18589506 4 + 33263144 atcc i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198287452 4 + 210400635 atcc i calJac3.chr1 C 0 C 0 s mm10.chr15 77139262 4 + 104043685 GTCC i mm10.chr15 C 0 C 0 e canFam3.chr10 40913257 0 - 69331447 C a score=431222.000000 s hg38.chr22_KI270876v1_alt 139530 143 + 263666 cagcactttggaaggccggggtgggaggactgcttgaggccaggagttcaagaccagcctgggcaacatagcgagaccctatctctacaaaaaaaattt------ttttaaatagccaggtgtggtggcatgcacctgtagtactacct s panTro4.chr22 34516967 143 + 49737984 cagcactttggaaggccggggtgggaggactgcttgacgccaggagttcaagaccagcctggacaacatagcgagaccctatctctacaaaaaaatttt------ttttaaatagccaggtgtggtggcatgcacctgtagtactacct i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30933494 143 + 46535552 cagcactttagaaggccggggtgggaggactgcttgaggccaggagttcaagaccagcctgggcaacatagcgagaccctatctctacaaaaaaaaatt------ttttaaatagccaggtgtggtggcatgcacctgtagtactagct i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100484294 143 - 115148730 cagcactttggaaggccggggtgggaggactgcttgaggccaggagttcaagaccagtctgggcaacatagcgagaccctatctctacaaaaaattttt------ttttaaatagccaggtgtggtggcatgcgcctgtagtactagct i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80637195 143 + 95678458 cagcactttggaaggcccaggtgggaggactgcttgaggccaggagttcaagaccagcctgggcaatatagcgagaccctatctctacaaaaaaatttt------ttttaaatagccaggtgtggtggcatgtgcctgtagtactagct i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81063799 143 - 96509753 cagcactttggaaggcccaggtgggaggactgcttgaggccaggagttcaagaccagcctgggcaatatagcgagaccctatctctacaaaaaaaattt------ttttaaatagccaggtgtggtggcatgtgcctgtagtactagct i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76321303 143 + 90941950 cagcactttggaaggcccaggtgggaggactgcttgaggccaggagttcaagaccagcctgggcaatatagcgagaccctatccctacaaaaaaatttt------ttttaaatagccaggtgtggtggcatgtgcctatagtactagct i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18589510 143 + 33263144 cagcactttggaaggcccaggtgggaggactgcttgaggccaggagttcaagaccagcctgggcaatatagcgagacccgatctctacaaaaaaaattt------ttttaaatagccaggtgtggtggcatgtgcctgtagtactagct i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198287456 141 + 210400635 cagcacttcgggaagctgagataggaggactgtttgaggccaggagttcaagaccagcctgggca--------agaccctacctctaaaaaaaaatttttttttcttttaaatagccaggtgtggtggcatgcacctgtagtgctagct i calJac3.chr1 C 0 C 0 e mm10.chr15 77139266 0 + 104043685 C e canFam3.chr10 40913257 0 - 69331447 C a score=24795.000000 s hg38.chr22_KI270876v1_alt 139673 7 + 263666 actca-------gg s panTro4.chr22 34517110 7 + 49737984 actca-------gg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30933637 7 + 46535552 actca-------gg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100484437 7 - 115148730 actca-------gg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80637338 7 + 95678458 actca-------gg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81063942 7 - 96509753 actca-------gg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76321446 7 + 90941950 actca-------gg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18589653 7 + 33263144 actca-------gg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198287597 14 + 210400635 actcaggactcggg i calJac3.chr1 C 0 C 0 s canFam3.chr10 40913257 7 - 69331447 ACTCA-------GG i canFam3.chr10 C 0 C 0 e mm10.chr15 77139266 0 + 104043685 C a score=438867.000000 s hg38.chr22_KI270876v1_alt 139680 143 + 263666 gggctgaggtgagaggaccacttgagcccaggagtttgaggatgcagtgagcctagatcacaccactgtactccatcctgagcaacagagagagaccatgtctctaaggaaaaaacaa--aacaaagaaaTAGATGTCACTCAGG s panTro4.chr22 34517117 143 + 49737984 gggctgaggcgagaggaccacttgagcccaggagtttgaggatgcagtgagcctagatcacaccactgtactccatcctgagcgacagagagagaccatgtctctaaggaaaaaacaa--aacaaagaaaTAGTTGTCACTCAGG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30933644 143 + 46535552 gggctgaggcgagaggaccacttgagcccaggagtttgaggatgcagtgagcctaggtcacaccactgtactccatcctgagcgacagagagagaccatgtctctaaggaaaacacaa--aacaaagaaaTAGTTGTCACTCAGG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100484444 143 - 115148730 aggctgaggcgagaggatcacttgagcccaggagtttgaggctgcagtgagcctagatcacaccactctactccatcctgagcgacagagagagaccatgtctctaaggaaaaaacaa--aacaaagaaaTAGTTGACACTCAGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80637345 143 + 95678458 aggctgaggtgagaggaccacttgggcccaggagtttgaggctgcagtgagcctggatcataccactgtactccatcctgagtgacagagagggaccatgtctctaaggaaaaaacaa--aacaaagaaaTAGTTGTAACTCAGG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81063949 143 - 96509753 aggctgaggtgagaggaccacttgggcccaggagtttgaggctgcagtgagcctggatcataccactgtactccatcctgagtgacagagagggaccatgtctctaaggaaaaaacaa--aacaaagaaaTAGTTGTAACTCAGG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76321453 143 + 90941950 aggctgaggcgagaggaccacttgggcccagaagtttgaggctgcagtgagcctagatcataccactgtactccatcctgagtgacagagagggACCATGTctctaaggaaaaaacaa--aacaaagaaatagttGTAACTCAGG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18589660 143 + 33263144 aggctgaggcgagaggaccacttgggcccaggagtttgaggctgcagtgagcctagatgataccactgtactccatcctgagtaacagagagggaccatgtctctaaggaaaaaacaa--aacaaagaaaTAGTTGTAACTCAGG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198287611 145 + 210400635 aggctgaggcgaaaagaccacttgagcccaggagcttgaggctacagtgagactagatcacaccactgtactctattctgagtgacagagagagaccatgtctctaagaaaaaaaaaaacaacaaagaaaTAGTTGTAACTCAGG i calJac3.chr1 C 0 C 0 e mm10.chr15 77139266 0 + 104043685 C e canFam3.chr10 40913264 0 - 69331447 C a score=1521133.000000 s hg38.chr22_KI270876v1_alt 139823 435 + 263666 TTCCAAAtaaaacac--tggcaaagtagtagagtgtcttctgaattacaaaatatttaattatgctttataaattttg--ttgggtattctgttgtagtctacctcttt------aaaatagaaaattcacatgatatacatatagtaacAGAGAAAAA--TTTT-CCCTATCCCTTTCCCAGAACAAAA-CACATTTTGTCTACAACCATGGTTACATGGTGGCTTATATATTCTTTAATCATTTAACAAGTAAAGTCCCTAAGTCAACCAGGGACTGAATCATAAACGTCTTCATCATAGCTTCCTCACCAAATGAAGTGATGATGAGCATATAGGAAGTGCCCTTTAGAAAATGCCTGGTAATTGAATTAACCAGGTAATTGAATACCTGCTTCTGCAGTA--TAAGTCTAT-AAAAAAAAGATAGGAA---CCATTCTCTCAATAGCTTTA s panTro4.chr22 34517260 435 + 49737984 TTCCAAAtaaaacac--tgccaaagtattagagtgtcttctgaattacaaaatatttaattatgctttataaattttg--ttgggtattctgttgtagtctacctcttt------aaaatagaaaattcacatgatatacatatagtaacAGAGAAAAA--TTTT-CCCTATCCCTTTCCCAGAACAAAA-CACATTTTGTCTACAACCATGGTTACATGGTGGCTTATATATTCTTTAATCATTTAACAAGTAAAGTCCCTAAGTCAACCAGGGACTGAATCATAAACGTCTTCATCATAGCTTCCTCACCAAATGAAGTGATGATGAGCATATAGGAAGTGCCCTTTAGAAAATGCCTGGTAATTGAATTAACCAGGTAATTGACTACCTGCTTCTGCAGTA--TAAGTCTAT-AAAAAAAAGATAGGAA---CCATTCTCTCAATAGCTTTA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30933787 434 + 46535552 TTCCAAATAAAACAC--TGGCAAGGTATTAGAGTGTCTTCTGAATTACAAAATATTTAATTATGCTTTATAAATTTTG--TTGGGTATTCTGTTGTAGTCTACCTCTTT--------AATAGAAAATTCACATGATATACATATAGTAACAGAGAAAAA--TTTT-CCCTATCCCTTTCCCAGAACAAAA-CACAATTTGTCTACAACCATGGTTACATGGTGGCTTATATATTCTCTAATCATTTAACAAGTAAAGTCCCTAAGTCAACCAGGGACTGAATCATAAACGTCTTCATCATAGCTTCCTCACCAAATGAAGTGATGATGAGCACATAGGAAGTGCCCTTTAGAAAATGCCTGGTAATTGAATTAACCAGGTAATTGAATATTTGCTTCTGCAGTA--TAAGTCTATAAAAAAAAAGACAGGAA---CCATTCTCTCAATAGCTTTA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100484587 434 - 115148730 TTCCAAAtaaaacac--tggcaaggtattagagtgtcttctgaattacaaaatatttaattatgctttataaattttg--ttgggtattctcttgtagtccacctcttt------aaaacagaaaattcacatgatatacatatagtaacAGAGAAAAG--TTTT-CCCTATCCCTTTCTCGGAACAAAA-CACATTTTGTCTACAACCATGGTTACGTGGTGGCTTATATATTCTCTAATCATTTAACAAGTAAAGTCCCTAAGTCAACCAGGGACTGAATCATAAATGTCTTCATCATAGCTTCCTCACCAAACGAACTGATGATGAGCACATAGGAGGTGCCCTTTAGAAAATGCCTGGTAATTGAATTAACCACGTAATTGAATACCTGCTTCTGCAGTA--TACGTCTAT--AAAAAAAGATAGGAA---CCATTCTCTCAATAGCTTTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80637488 429 + 95678458 TTCCAAATAAAACAC--TGGCAAGGTACTAGAGTGTTTTCTGAATTACAAAATATTTAATTATGCGTTATAAATGTTA--TTAGGCATTCTGTTGTAGTCTACCTCTTT------AAAATAGAAAATTCACATTATAAACATAGAGTAACAGAGAAAAA--TTTT-CCCTATCCCTTTCCCAGAACAAAA-CACATTTTGTCTACAACCATGGTTACATGGTGGCTTATATATTCTCTAATCATTTAACAAGCAAAGTCCCTAAGTCAACCAGGGACTGAATCATAAA---CTTCATCATAGCTTCCTCACCAAATGAAGTGATGATGAGCACATAACAGGTGCCCTTTAGAAAATGCCTGGTAATTGAATTAACCAGGTAATTGAATACCTGCTTCTGCAGTA--TAAGTCT----AAAAAAAGATAGGAA---CCATTCTCTCAATAGCTTTA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81064092 429 - 96509753 TTCCAAAtaaaacac--tggcaaggtactagagtgttttctgaattacaaaatatttaattatgcattataaatgtta--ttaggcattctgttgtagtctacctcttt------aaaatagaaaattcaCATTATAAACATAGAGTAACAGAGAAAAA--TTTT-CCCTATCCCTTTCCCAGAACAAAA-CACATTTTGTCTACAACCATGGTTACATGGTGGCTTATATATTCTCTAATCATTTAACAAGCAAAGTCCCTAAGTCAACCAGGGACTGAATCATAAA---CTTCATCATAGCTTCCTCACCAAATGAAGTGATGATGAGCACATAACAGGTGCCCTTCAGAAAATGCCTGGTAATTGAATTAACCAGGTAATTGAATACCTGCTTCTGCAGTA--TAAGTCT----AAAAAAAGATAGGAA---CCATTCTCTCAATAGCTTTA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76321596 429 + 90941950 TTCCAAATAAAACAC--TGGCAAGGTACTAGAGTGTTTTctgaattacaaaatatttaattatgcTTTATAAATGTTG--TTAGGCATTCTGTTGTAGTCTAcctcttt------aaaatagaaaattcacatTATAAACATACAGTAACAGAGAAAAA--TTTT-CCCTATCCCTTTCCCAGAACAAAA-CACATTTTGTCTACAACCATGGTTACATGGTGGCTTATATATTCTCTAATCATTTAACAAGTAAAGTCCCTAAGTCAACCAGGGACTGAATCATAAA---CTACATCATAGCTTCCTCACCAAATGAAGTGATGATGAGCACATAACAGGTGCCCTTTAGAAAATGCCTGGTAATTGAATTAACCAGGTAATTGAATACCTGCTTCTGCAgta--taagttt----aaaaaaagataggAA---CCATTCTCTCAATAGCTTTA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18589803 429 + 33263144 TTCCAAATAAAACAC--TGGCAAGGTACTAGAGTGTTTTCTGAATTACAAAATATTTAATTATGCTTTATAAATGTTG--TTAGGCATTCTGTTGTAGTCTACCTCTTT------AAAATAGAAAATTCACATTATAAACATACAGTAACAGAGAAAAA--TTTT-CCCTATCCCTTTCCCAGAACAAAA-CACATTTTGTCTACAACCATGGTTACATGGCGGCTTATATATTCTCTAATCATTTAACAAGTAAAGTCCCTAAGTCAACCAGGGACTGAATCATAAA---CTTCATCATAGCTTCCTCATCAAATGAAGTGATGATGAGCACATAACAGGTGCCCTTTAGAAAATGCCTGGTAATTGAATTAACCAGGTAATTGAATACCTGCTTCTGCAGTA--TAAGTCT----AAAAAAAGATAGGAA---CCATTCTCTCAATAGCTTTA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198287756 428 + 210400635 TTCCAAATAAAACAC--TGGCAAGGTGTTAGAATGTCTTCTGAATTACAAAAT-TTTCATTATGCTTTATAAGTTTTG--TTAGGGATTCTAATGTAGTCTACCTCTTT------AAAACAAAAAATTCACATGATATACATATAGTAACAAAGAAAAAATTTTT-CTTTATCCCTTTCCCAGAACAAAA-CACATTTTGTCTACAACCATGGTTACATGGTGGCTTAAATATTCTCTAATCAGTTAAC-----AAGTCTCTAAGTCAGCCAGGGACTGACTCATGAACTTCTTCATCATAGCTTCCTCACCAAATGAAGTGATGATGAGCACACAGCAGGTGACCTTTAGAAAATATATGCTTATTGAACTAACCAGGTGGTTGAATATCTGCTTCTGTAGTT--TAAGTCT----ATAAAAAAATAGGAA---CCATTCTCTCAATAGCTTTA i calJac3.chr1 C 0 C 0 s mm10.chr15 77139266 404 + 104043685 ---AGAATAAAACACTGTGGCAGGCCCTCAGAGTGTCTTCGGAATTATAAAAG----AACTATGTTTTACGGGT---------GGTGCTCTCCTGTAGCCAATTTACTTATGACAAGGAAAAAAAAATTATAAGATACATATAAAGTAAGAGGGAAAAA--TCTT-CCCTATTCCTGTCCTAGGGAAAAA-TGCA-TGTGTCTACAGTCCCAATTCTATAATGGTTTGGACATTCTCT----ATTTTGCAAGTGAAGTTTCTAAGTTGGTTAGAAATT-AGCTACAGACTTTTTCATTCTAAATT-CTCCTTGCACAAGAGGCTGGTGGACACACAGTAGCATTTCTTTAGAGAATGCTT----ACTAAATTGATC-------------CCTTACTCTGAAGTG--CCATCTG----TAAAAAAGATGGACAACTCCTCTTCCCCATGAGCTTA- i mm10.chr15 C 0 I 70 s canFam3.chr10 40913264 426 - 69331447 TTCAGAATAAAACAC--GAACAAGATTTTGTAGTGCCTTCCAAACCAGAAAATATTTAATTATTCTTTATGGATATTGCACTGGACATCCTATTATAGTTCACTTCTTC------AAAATGAGTAAGTCATAT----AACATATAGTAACAGACAGAAT--TTTTCCCCTCTACTGTTCCCCAAACAAAATTGCATTCTGTCTGCAACCACAATCACAGGATGGTTTATATTTCCTCCACTGGCTTCACAAGAAAAGCCCCTAAGTAGATCAGAGGCTGAATCACATGTG-CTTTGTCATAGCTTCCTCACCAAAA--------GATAGGTGCACAGCAGGTGATCTTTAGAAAACGTTTGCTAATTGAAGCAACCAGGTAGTTGAATATCTGCTTCTAAAGCTGCTAAGTCT---GTAAGAAACATAAGGA---CCTTTCTCTTTCTAGCTTTA i canFam3.chr10 C 0 C 0 a score=241643.000000 s hg38.chr22_KI270876v1_alt 140258 80 + 263666 CCAACTCTGCCAGGGACCTTACCACAATA--------------TAAATAATCATTCTATTAAG---------------------ATACATAT--------AAGGCTATATGTGGGAGTCCACA s panTro4.chr22 34517695 80 + 49737984 CCAACTCTGCCAGGGACCTTACCACAATA--------------TAAATAATGATTCTATTAAG---------------------ATACATAT--------AAGGCTATATGTGAGAGTCCACA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30934221 80 + 46535552 CCAACTCTGCCAGGGACCTTACCACGATA--------------TAAATAATCATTCTATTAAG---------------------ATACATAT--------AAGGCTATATTTGAGAGTCCACA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100485021 80 - 115148730 CCAACTCTGCCAGGGACCTTACCACAATA--------------TAAATAATCATTCTATTAAG---------------------ATACATAT--------AAGGCTATATGTGAGAGTCCACA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80637917 80 + 95678458 CCAACTCTGCCAGGGACGTCACCACAATA--------------TAAATAATCATTCTATGAAA---------------------ATATATAT--------AAGGCTATATGTGAGAGTCCACA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81064521 80 - 96509753 CCAACTCTGCCAGGGACGTCACCACAATA--------------TAAATAATCATTCTATGAAA---------------------ATATATAT--------AAGGCTATATGTGAGAGTCCACA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76322025 80 + 90941950 CCAACTCTGCCAGGGACCTCACCACAATA--------------TAAATAATCAttctatgaaa---------------------atatatat--------aaggcTATATGTGAGAGTCCACA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18590232 80 + 33263144 CCAACTCTGCCAGGGACCTCACCACAATA--------------TAAATAATCATTCTATGAAA---------------------ATATATAT--------AAGGCTATATGTGAGAGTCCACA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198288184 80 + 210400635 CCAACTGTGCCTGGGACCTTACCACAATA--------------TAAATAATCATTCTATTAAG---------------------ATACATGT--------AAGGCTACATGTGAGAGTCCACA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40913690 120 - 69331447 GGAAGTCTG-CAGAAAGTTCACCATGATATCAAGTATTGTTCCTAAATATTTACCATAGAAAACGAGCAATTATGGGCCTTTTCATGCACACGTTGGGGGAAGGCT--GTGGGAGAATCCGAG i canFam3.chr10 C 0 C 0 e mm10.chr15 77139670 70 + 104043685 I a score=88102.000000 s hg38.chr22_KI270876v1_alt 140338 29 + 263666 ------------------------------TTATGTAC-TATGGGAAATTAAAAGAAAAA s panTro4.chr22 34517775 29 + 49737984 ------------------------------TTATGTAC-TATGGGAAATTAAAAGAAAAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30934301 29 + 46535552 ------------------------------TTATGTAC-TATGGGAAATTAAAAGAAAAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100485101 29 - 115148730 ------------------------------TTATGTAC-TGTAGGAAATTAAAAGAAAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80637997 29 + 95678458 ------------------------------TTATGTAC-TATGGGGAATTAAAAGAAAAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81064601 29 - 96509753 ------------------------------TTATGTAC-TATGGGGAATTAAAAGAAAAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76322105 29 + 90941950 ------------------------------TTATGTAC-TATggggaattaaaagaaaaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18590312 29 + 33263144 ------------------------------TTATGTAC-TATGGGGAATTAAAAGAAAAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198288264 24 + 210400635 ------------------------------TTGTGTAC-TATGGGAAAT-----GAAAAG i calJac3.chr1 C 0 C 0 s mm10.chr15 77139740 29 + 104043685 ------------------------------TTAGGTAC-CACGGGAGAATGAAAAGAAAA i mm10.chr15 I 70 I 318 s canFam3.chr10 40913810 60 - 69331447 CCgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagagagagaga i canFam3.chr10 C 0 C 0 a score=149073.000000 s hg38.chr22_KI270876v1_alt 140367 66 + 263666 ---------------TGAGCCA------TTGCTCT----------CACCTAGGCTATCTAAATAACAT---TTTTTTTGGTTTTTAAAGAGTTCTGCTTT s panTro4.chr22 34517804 66 + 49737984 ---------------TGAGCCA------TTGCTCT----------CACCTAGGCTATCTAAATAACAT---TTTTTTTTGTTTTTAAAGAGCTCTGCTTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30934330 69 + 46535552 ---------------TGAGCCA------CTGCTCT----------CACCTAGGCTATCtaaataatatatatattttttgtttttaaaGAGTTCTGCTTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100485130 68 - 115148730 ---------------TGAGCCA------CTGCTCT----------CACCTAGGCTATCTAAATAATATAT-ATTTTTTTGTTTTTAAAGAGTTCTGCTTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80638026 63 + 95678458 ---------------TGAGCCG------CTGTTCT----------CACCTAGGCTATCTACATAAT-----CTTTTTTGG-TTTTAAAGAGTTCAGCTTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81064630 63 - 96509753 ---------------TGAGCCG------CTGTTCT----------CACCTAGGCTATCTACATAAT-----CTTTTTTGG-TTTTAAAGAGTTCAGCTTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76322134 64 + 90941950 ---------------tgagccg------CTGTTCT----------CACCTAGGCTATCTACataat-----gttttttggtttttaaagagTTCAGCTTT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18590341 64 + 33263144 ---------------TGAGCCG------CTGTTCT----------CACCTAGGCTATCTACATAAT-----CTTTTTTGGTTTTTAAAGAGTTCAGCTTT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198288288 63 + 210400635 ---------------TGAGCCA------CTGCTCT----------CACCTAGGCTATTCAAAGAAC-----TTTTTTTTA-AAATAAATAGCTCTGtttt i calJac3.chr1 C 0 I 313 s canFam3.chr10 40913870 89 - 69331447 gagagagagagagagagaACCAGCATCTCTGCTCTTAGCAACTCCCATCCAGGCTATTCCGGGAAT-----CTCTCTTCT------AGGCATTCTCCTGT i canFam3.chr10 C 0 C 0 e mm10.chr15 77139769 318 + 104043685 I a score=781388.000000 s hg38.chr22_KI270876v1_alt 140433 236 + 263666 ATTTTAACTTAACCTCAACCT-------------AATGAACTCTCCAAGCACCTGCCAGAATGATCTTTCTAAAATAAAACCTAAATCTGATA--GTTAATTTATCTTCTTCTTAAAATCCTAGACTGCCAATGTTTACAGTCTCAAGTCCAAATACCTTTGCATGGAAGTCATGCCCCTTGCACACTTCATCTATTCAGCTTCAACTCTTGCcatcaaatatttattgagtatctatcattcatcagata s panTro4.chr22 34517870 236 + 49737984 ATTTTAACTTAACCTCAACCT-------------AATGAACTCTCCAAGCACCTGCCAGAATGATCTTTCTAAAATAAAACCTAAATCTGATA--GTTAATTTACCTTCTTCTTAAAATCCTAGACTGCCAATGTTTACAGTCTCAAGTCCAAATGCCTTTGCATGGAAGTCATGCCCCTTGCACACTTCATCTATTCAGCTTCAACTCTTGCcatcaaatatttattgagtatctatcgtttgtcagata i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30934399 236 + 46535552 ATTTTAACTTAACCTCAACCG-------------AATGAACTCTCCAAGCACCTGCCAGAATGATCTTTCTAAAATAAAACCTAAATCTGATA--GTTAATTTATCTTCTTCTTAAAATCCTAGACTGCCAATGTTTACAGTCTCAAGTCCAAATACCTTTGCATGGAAGTCATGCCCCTTGCACACTTCATCTAGTCAGCTTCAACGCTTGCcatcaaatatttattgagtatctatcatgtgtcagata i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100485198 234 - 115148730 ATTTTAACTTAACCTCAACCT-------------AATGAactctccaagtggctgccagaatgatctttctaaaataaaacctaaatctgata--gttaatttaccttcttcttaaaatcctAGATT--TGAGACTTACAGTCTCAAGTCCAAATACCTTTGCATGGAAGTCATGCCCCTTGCACACTTCATCTATTCAGCTTCAACTCTTGCcatcaaatatttattgagtatctaccacgtgtcagata i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80638089 246 + 95678458 ATTTTAACTTAACCTCaacctccaatgaacctccaatgaactctccaagcagctgccagaatgatctttctaaaataaaacctaaatctgata--gttaattta---tcttcttagaatcctagcctcccaGTGTTTACAGTCTCAAGTCCAAATACCTTTGCATGGAAGTCATGCCTCTTGCACACTTCATCTATTCAGCTTCAACTCTTGCcattaaatatttattgagtatctatcgtgtgttagata i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81064693 246 - 96509753 ATTTTAACTTAACCTCaacctccaatgaacctccaatgaactctccaagcagctgccagaatgatctttctaaaataaaacctaaatctgata--gttaattta---tcttcttagaatcctagcctcccagtgtttacagtctcaAGTCCAAATACCTTTGCATGGAAGTCATGCCTCTTGCACACTTTATCTATTCAGCTTCAACTCTTGCcatcaaatatttattgggtatctatcgggtgttagata i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76322198 233 + 90941950 ATTTTAACTTAACCTCAACCT-------------AATGAACTCTCCAAGCAGCTgccagaatgatctttctaaaataaaacctaaatctGATA--GTTAATTTA---TCTTCTTAGAATCCTAGACTCCCAATGTTTACAGTCTCAAGTCCAAATACCTTTGCATGGAAGTCATGCCTCTTGCACACTTCATCTATTCAGCTTCAACTCTtgccatcaaatatttattgagtatctatcGTGTGTTAGATA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18590405 233 + 33263144 ATTTTAACTTAACCTCAACCT-------------AATGAactctccaagcagctgccagaatgatctttctaaaataaaacctaaatctgata--gttaattta---tcttcttagaatcctAGACTCCCAATGTTTACAGTCTCAAGTCCAAATACCTTCGCATGGAAGTCATGCCTTTTGCACACTTCATCTATTCAGCTTCAACTCTTGCcatcaaatatttattgagtatctatcgtgtgttagata i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198288664 235 + 210400635 cttttaccttaacctcaacct-------------aatcaactctccaagcagctgccagaatgatctttctaaaataaaacctaaatctgatattgctaattta---tcttcttaaaatcctAGACTCCCAATGTTTACAGTCTCAAGTCCAAATGCCTCTGCATGGAAGTCATGCCCCTTGCACACTTCACCTATTCAGCTTCAACTCTTGCcatcaaatatttattgagtacctaccatgtgttagata i calJac3.chr1 I 313 C 0 s canFam3.chr10 40913959 229 - 69331447 --CTTGGAACAATCTCAACCT-------------GATCAA-TTTTCAAGCAGCTCCCAGAACAAGCTCCCTAAAGTAAAATCGGAATCAGATATTGTTAACCAATTCACTCCTGAAAGTCCTAGACT--CAATGACCATGATCTCCAGTCCAAATACCTTTGGATGGAAGTCATATCCCCTGCAACCTTCACCTGTCCAGCTTCAACTCTCGCCACTGAG----tactgagtacttctgaggggccagaag i canFam3.chr10 C 0 C 0 e mm10.chr15 77139769 318 + 104043685 I a score=1476487.000000 s hg38.chr22_KI270876v1_alt 140669 449 + 263666 ttctgttctagctgctgatgaaacaacgatgattaaaaagaca--aagtccctgcccttatggagtttacattctagtaggaagagacaaataataaattggcaagtaaaacaataaacagatggtatgctacagagaa----aaaataagagg-agggtatcggggtattgggctggagagacagagaatttctattttctaa-ggctggtctagcaaggtaa-ca-ctgatcataattttttagaaactaaggcaacaagctatacgtgtatctggatggaag-aagactccagacaaagggaacacaaatgcaaagtcccacaggcaaaaatacaagcagctcattctaagaactaggaacatggaggccttggagacctatgtgatcagactggagta---agcatg--gaacagagtggcaggagatgaagcgagaaaggtagcagtggggaaagaggga s panTro4.chr22 34518106 449 + 49737984 ttctgttctagctgctgatgaaacaacggtgattaaaaagaca--aagtccctgcccttatggagtttacattctagtaggaagagacaaataataaattggcaagcaaaacaataaacacatggtatgctacagagaa----aaaataagagg-agggtatcggggtattgggctggagagacagagaatttctattttctaa-ggctggtctaggaaggtaa-ca-ctgatcatacttttttagaaattaaggcaacaagctatatgtgtatctggatggaag-aagactccagacaaagggaacacaaatgcaaagtcccacaggcaaaaatacaagcagctcattctaagaactaggaacatggaggccttggagacctatgtgatcagactggagta---agcatg--gaacagagtggcaggagatgaagcgagaaaggtagcagtgggtaaagaggga i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30934635 449 + 46535552 ttctgttctagctgctgaggaaacaatggtgattaaaaagaca--aagtccctgcccttatggagtttacattctagtaggaagagacaaataataaattggcaagcaaaacaataaacagatggtgtgctacagagaa----aaaataagagg-agggtatcggggtattgggctggagagacagagaatttctgttttctaa-cgctggtctgggaaggtaa-ca-cagatcatacttttttagaaattaaggcaacaagctatatgtgtatctggatggaag-aagactccagacaaagggaacacaaatgcaaagtcccataggcaaaaatacaagcagctcattctaagaactaggaacatggaggccttggagacctatgtgatcagactggagta---agcatg--gaacagagtagcaggagacgaagtgagaaaggtagcagtggggaaagaggga i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100485432 449 - 115148730 ttctgttctagctgctgaggaaacgacggtgattaaaaagaca--aagtccctgcccttatggagtttacactctagtaggaagagacaaataataaattggcaagcaaaacaataaatagatggtgtgctacagagaa----aaaataaga-g-agggtatcagggtattgggctggacagacagagaatttctattttctaa-ggctggtctgggaaggtaa-ca-ctgatcatacttatttagaaattaaggcaacaagctatatgtgtatctggatggaagaaagactccagacaaagggaacacaaatgcaaagtcccataggcaaaaatacaagcagctcattctaagaactaggaacatggaggccttgaagacctatgtgatcagactggagta---agcatg--gaacagagtggcaggagacgaagtgagaaaggtagcggtagggaaaaaggga i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80638335 447 + 95678458 ttctgtcgtagctgctgaggaaacaacggtgattagaaagcca--aagtccctgcccttatggagtttacattctagtaggaagagacaaataataaatcggcaagcaaaacaataaacatttggtgtgctacagagaa----aaaataagagg-agggtatcagggtattgggctggagagacagagaatttcctttttctac-gggtggtatggaaaggtaa-ca-ctgatcatacttttttagaaattaaggcaacaagtcatatgtgcatctggatggaag-aagactccagacaaagggaacacaaatgcaaagtcccacaggcaaaaacacaagtagctcattctaagaactaggaacatggaggccttggaaacctatgtgataacactggtgta---agcat---gaacagagtggcaggagatgaagtgagaaaggtagccgtggggaaaga-cga i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81064939 446 - 96509753 ttctgtcctagctgctgaggaaacaacggtgattaaaaagcca--aagtccctgcccttatggagtttacattctagtaggaagagacaaataataaaccggcaagcaaaacaataaacatttggtgtgctacagagaa----aaaataagagg-agggtatcagggtattgggctggagagacagagaatttcctttttctac-gggtggtatggaaaggtaa-ca-ctgatcatacttttttagaaattaaggcaacaagtcata-gtgcatctggatggaag-aagactccagacaaagggaacacaaatgcaaagtcccacaggcaaaaacacaagtagctcattctaagaactaggaacatggaggccttggaaacctatgtgataacactggtgta---agcat---gaacagagtggcaggagatgaagtgagaaaggtagcagtggggaaaga-cga i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76322431 447 + 90941950 TTCTGTCCTAGTTGCTGAGGAAACAACAGTGATTAAAAAGCCA--AAGTCCCTGCCtttatggagtttacattctagtaggAAGAGACAAATAATAAATCGGCAAGCAAAACAATAAACAGATGGTGTgctacagagaa----aaaataaaagg-agggtATCAGGGTATTGGGCTGCAGAGACAgagaatttcctttttctac-GGGTGGTATGGAAAGGTAA-CA-CTGATcatatttttttagaaattaaggCAACAAGTCATATGTGCATCTGGATGGAAG-AAGACTCCAGACAAAGGGAACACAAATGCAAAGTCCCACAGGCAAAAACACAAGTAGCTCATTCTAAGAACCAGGAACATGGAGGCCTTGGAAACCTATGTGATAACACTGGTGTA---AGCAT---GAACAGAGTGGCAGGAGATGAAGTAAGAAAGGTAGCAGTGGGGAAAGA-CGA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18590638 445 + 33263144 ttctgtcctagctgctgaggaaacaacggtgattaaaaagcca--aagtccctgcccttatggagtttacattctagtaggaagagacaaataataaattggcaagcaaaacaataaacagatggtgtgctacagagaa----aaaataagagg-agggtatcagggtattgggctggagagacagagaatttcctttttctac-aggtggtatggaaaggtaa-ca-ctgatcatacttttttagaaattaaggcaacaagtcatatgtgcatctggatggaag-aagactccagacaaagggaacacaaatgcaaagttccataggcaaaaacacaagtagctcattctaagaactaggaacatggaggccttggaaacc--tgtgataacactggtgta---agcat---gaacagagtggcaggagatgaagtgagaaaggtagcagtggggaaaga-cga i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198288899 437 + 210400635 ctgtgttcaagctgctgaggaaacaacagtgattaaaaagaca--aagtccctgcccttatggagtttacattctagtagatagagacaaataataaattagcaagcaaaacaataaacagatggtatactacagaaaa----aaactaagagg-agggtatcagagtattgggctagagggatacagaatttctattttcaa------------ggaaggtaa-ta-tttatcatacttttttggaaattaaggcaacaagccatttgtgtatctggatggaag-aagtctccagaaaaagggagcacaaacgcaaagtcccataggcaaaaatacaggcagcttattctaagaactaggaacatggaggccttggaggcctatgggattggac-aaaaca---agcatg--gaacagagtggcaggagatgaaataagaaaggcagaagtggggaaagagaaa i calJac3.chr1 C 0 C 0 s mm10.chr15 77140087 361 + 104043685 CTCTGCTGTAG-----------ACAACCACAAGTAATTAGCCACCCACTCCTTGCCCTT---GAGTTCACTTTTTAGTAGGCACAGAAAAGTAACTGA-AAGCAAGCAAAGCAAAGACCAGGTGGACTGC-----------------CGAAAGG-CAGGTGACAGGG--------------------GGACTTCTACCATCTGC-AGGAGGCCAGGGACAGTGA-CATCTGGTCAGGTCTCTTTGGAAATCAAGGTAGCAAG----ATGTCTGTTTGGATGGAAG-AATACTGCAGACAAAGGAAACAC-AGTACAGAGGTCC-----------------------------AGAACAAGAGACCCAGAGGC-----------ATGTGACCAGCCTGGAATA---GAGAGGCAAGGCACAGGGACAGGTGATGGAGTGAGGAAGGCGGCAGTGGGCAGACTGGGA i mm10.chr15 I 318 I 71 s canFam3.chr10 40914188 427 - 69331447 cctggttttaggtgctgtggaaacaatggtgactaaagagaca--aagttcctacccttggggagtgtacattctaggaagga--------------------aagccaaacaagaaacgg--ggtgagccatggaggacactaaagcgagaaatggggtatgggggcaccaggttggggcgacagaggactgctattcgatactgggcactcagggaaggtaagca-ctgagcaaacaccagaagaaatccagagggcaagccatgtgtctgtgtgtg-gggag-aacacttcagacaaagggagcacaaatgcaaaggctcagccatgaaaagctgcttagcttattcc-agaactaggaacgaggaggccctg--------tgtgtcagacctggaacatgcagcaag--aaacacagtggcgggaggtaaggggaggaagataacagtgagcagagggaga i canFam3.chr10 C 0 C 0 a score=1179670.000000 s hg38.chr22_KI270876v1_alt 141118 353 + 263666 cgtt-gatagaaatcctgtaaagcttacagccactgcagggaggttagcttttacactccactgagagttctgagcagagaagtgatgtggtcagaattaggtttta-aatgtaccactcggcaaaggcaaaggcagggagccctgttgggaggcgaccctgataattcagctgagatgaagagggtttggtgcaggtggtAATCTAATGTGTGTCGAATGctg-aaaacaccacgtactgtttcaccttccagtttctttgcacatagtattctttctgcttagaaagcttttctcctttctactcattgggctaatacatacacaa------------tctttaa----taggtatttgggcatctactc s panTro4.chr22 34518555 353 + 49737984 cgtt-gatagaaatcctgtaaagcttacagccactgcagggaggttagcttttacactccactgagagttctgagcagagaagtgatgtggtcagaattaggtttta-aatgtaccactcggcaaaggcaaaggcagggagccctgttgggaggcgaccctgataattcacctgagatgaagagggtttggcgcaggtggtAATCTAATGTGTGTCGAATGctg-aaaacaccatgtactgtttcaccttccagtttctttgcacatagtattctttctgcttagaaagcttttctcctttctactcattgggctaatacatacacaa------------tctttaa----taggtatttgggcatctactc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30935084 353 + 46535552 cgtt-gttagaaatcctgtaaagcttacagccactgcagggaggttagcttttacactccactgagagctctgagcagagaagtgatgtggtcagaattaggtttta-aatgtaccactcggcaaaggcaaaggcagggagccccgttgggaggtgaccctgataactcacctgagatgaagagggtttggcgcaggtggtAATCTAATGTGTGTCGAATGctg-aaaacaccatgtactgtttcaccttctagtttctttgcacatagtattctttctgcttagaaaacttttctcctttctactcattgggctaatacatacacaa------------tctttaa----taggtatttgggcatctactc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100485881 353 - 115148730 cgtt-gatagaaatcctgtaaagcttacagccactgcagggaggttagcttttacactccactgagagttctgagcagagaagtgatgtggtcagaattaggtttta-aatgtaccactcggcaaaggcaaaggcagggagccctgttgggaggcaaccctgataattcacctgagatgaagagggtctggcgcaggtggtAATCTAATGTGTGTCGAATGctg-aaaacaccatgtactgtttcaccttccagtttctttgcacatagtattctttctgcttagaaagcttttctcctttctactcattggactaatacatacacaa------------tctttaa----taggtatttgggcatctactc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80638782 351 + 95678458 tatt-gacagaattcctgtaaagcttacagccactgcagggatgttagcttttacactccactgagagttctgagcagagaa---gtgtggtcagaattaggtttta-aatgtaccactcggcaaaggcaaaggcagggagccctgttgggaggcgaccctgataattcacctgagatgaggagggtttggcacaggtggtAATCTAATGTGTGTCGAATGCTGaaaaacaccatgtactatttcaccttccagtttatttgcacatagtattatttctgcttagaaagcttttctcctttctactaatcaggctaatacgtacacaa------------tctttaa----tatgtatttgggcatttactc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81065385 351 - 96509753 tatt-gacagaattcctgtaaagcttacagccactgcagggatgttagcttttacactccactgagagttctgagcagagaa---gtgtggtcagaattaggtttta-aatgtaccactcggcaaaggcaaaggcagggagccctgttgggaggcgaccctgataattcacctgagatgaggagggtttggcacaggtggtAATCTAATGTGTGTCGAATGCTGaaaaacaccatgtactatttcaccttccagtttatttgcacatagtattatttctgcttagaaagcttttctcctttctactaatcaggctaatacgtacacaa------------tctttaa----tatgtatttgggcatttactc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76322878 354 + 90941950 TATT-GACAGAATTCCTGTAAAGCTTATAGCCACTGCAGGGATGTTAGCTTTTACACTCCACTGAGAGTTCTGGGCAGAGAAGTGGTGTGGTCAGAATTAGGTTTTA-AATGTACCACTTGGCAAAGGCAAAGGCAGGGAGCCCTGTTGGGAGGCGACCCTGATAATTCACCTGAGATGAGGAGGGTTTGGCACAGGTGGTAATCTAATGTGTGTCGAATGCTGAAAAACAGCATGTACTATTTCACCTTCCAGTTTATTTGCACATAGTATTATTTCTGCTTAGAAAGCTTTTCTCCTTTCTACTAATCGGGCTAATACGTACGCAA------------TCTTTAA----TATGTATTTGGGCATTTACTC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18591083 352 + 33263144 tatt-gacagaattcctgtaaagtttacagccactgcagggatgttagcttttacactccactgagagttctgagcagagaagtggtgtggtcagaattaggtttta-aatgtaccactcggcaaaggcaaaggcagggagccctgttgggaggcgaccctgataattcacctgagatgaggagggtttggcacaggtggtAATCTAATGTGTGTCGAATGCTGaaaaacaccatgtacta--tcaccttccagtttatttgcacatagtattatttctgcttagaaagcttttctcctttctactaatcgggctaatacgtacacaa------------tctttaa----tatgtatttgggcatttactc i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198289336 349 + 210400635 tgtt-ggtggaaatcctgtaaagcttacagccactgcagggattttagcttttacactccactaagagttttgagcagagaagtggtgtgattggaattaggttgta-aatgcaccactcggtaaagacaaaggcagggagtcctgttgggaggtgaccctgataattcacctgagatgaggagggtttggtgcagatggtAATCTAATGTGTGTCAAATGctggaaaacaccatgtgctgtttcaccttccagtttcttt-----tagtattcgttctgcttagaaagcttttctcctttctactcatctggcttacacatatacaa------------tctttaa----tatgtattcagaaatctactc i calJac3.chr1 C 0 C 0 s canFam3.chr10 40914615 365 - 69331447 tgttgggtagaaatcttacaaagcttaagagcactaccagggttttgactcttgctcgccagtgagggttttgagca---aagtggcacggtcaagtttaggttttacaagggaccactcag-agaggcagacacaggcagaacagttgggaggctatcataataacccacct--gatgccaggggctcagccctggtggtgCTCCTATGTGGGCtgcatcctagaagacaccttgtgctgtctcacc-tccagtttctctgcatctgctattccttctgcttagaaagccttcctccttcctccccatctggctaacttgtacacacctttTTTTTTTTTTTTTAAGTTttatttatttatttatttactt i canFam3.chr10 C 0 I 202 e mm10.chr15 77140448 71 + 104043685 I a score=1933707.000000 s hg38.chr22_KI270876v1_alt 141471 640 + 263666 ctctctagaggtt--------------------tctaattcactcaaaaaggggg---aaaatcattccttcctcctaccctccccaacctaatacttaactctattatggtacttatattcaattacaattatttgcttacatatgtattgtctttacagaacatgaactctttgaaggcaggtaattgtccagatctaattcatctttgtat-cccagtggctgccttaaaatctctcaataagtatttattaaagaaataaaAGATGT---TTCAACCCAGTAGAGTATATAAGCAAACACAAAGTTCTGTTA-----TAACA-AAAATG--ATATGGTGGTACAGG--AAGTGACCAA--CACTCAGCATCAGGAAACAAAGGTGATATGAGGTAGGGAAGACAAGGAGATTCATTAGAAGGATACCACAAACTTTGAAGGGACTT-ACACTAAAGCTATGAACTACATACAATAGCCAC----AGCGAGATATAGACT-GGGGGGCCTGAGCAATGACAATCCAAAGGCAGACTTGGCAGAACCTGGCAACGGGTATGAAGGAGAAGAA--GACTACTAGATTTCAACCCCAGGGTACTGTAGGCTAACAAGGAGTGAGCAAGAAAGAGTGGGAAAGGAGAAAGGATCAATTCTAGCAGTCCAAGATGT------------TCCTGATATAAAC--- s panTro4.chr22 34518908 640 + 49737984 ctctctagaggtt--------------------tctaattcactcaaaaaggggg---aaaatcattccttcctcctaccctccccaacctaatacttaactctattatggtacttacattcaattacaattatttgcttacatatgtattgtctttacagaacatgaactctttgaaggcaggtaattgtccagatctaattcatctttgtat-cccagtggctgccttaaaatctctcaataagtatttattaaagaaataaaAGATGT---TTCAACCCAGTAGAGTATATAAGCAAACACAAAGTTCTGTTA-----TAACA-AAAATG--ATATGGTGGTACAGG--AAGTGACCAA--CACTCAGCATCAGGAAACAAAGGTGATATGAGGTAGGGAAGACAAGGAGATTCATTAGAAGGATACCACAAACTTTGAAGGGACTT-ACACTAAAGCTATGAACTACATACAATAGCCAC----AGCGAGATATAGATT-GGGGGGCCTGAGCAATGACAATCCAAAGGCAGACTTGGCAGAACCTGGCAACGGGTATGAAGGAGAAGAA--GACTACTAGATTTCAACCCCAGGGTACTGTAGGCTAACAAGGAGTGAGCAAGAAAGAGTGGGAAAGGAGAAAGGATCAATTCTAGCAGTCCAAGATGT------------TCCTGATATAAAC--- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30935437 631 + 46535552 ctctctagaggtt--------------------tctaattcactcaaaaaggggg-aaaaaatcattccttcctcctaccctccccaacttaatacttaactctattgtggtacttatattcaattacaagtatttgcttacatatgtattgtctttacagaacatgaactctttgaaggcaggtaattgtctagatctaattcatctttgtat-cccagtggctgccttaaaatctctcaataagtatttattaaagaaataaaAGATGT---TTCAACCTAGTAGAGTATATAAGCAAACACAAAGTTCTGTTA-----TAACA-AAAATG--ATATGGTGGTACAGG--AAGCAACCAA--CACTCAGCATCAGGAAACAAAGGTGATATGAGGTAGGAAAGACAAGGAGATTCATTAGAAGGATACGACAAACTTTGAAGGGACTT-ACACTAAAGCTATGAACTATATACAATAGGCAC----AGCGAGATATAGATT-GGGGGGCCTGAG-----------CAAAGGCAGACTTGGCAGAACCTGGCAATGGGTATGAAGGAGAAGAC--GACTACTAGATTTCAACCCCAGGGTACTGTAGGCTAACAAGGAGTGAGCAAGAAAGAGTGGGAAAGGAGAAAGGATCAATTCTAGCAGTCTAAGATGT------------TCCTGATATAAAC--- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100486234 644 - 115148730 ctctctagaggtt--------------------tctaattcactcaaaaagggggaaaaaaatcattccttcctcctgccctccccaatctaatacttaactctattgtggtgcttatattcaattacaattatttgcttacatatgtattgtctttacagaacatgaactctttgaaggcagttaattgtccagacctaattcatctttgtat-cccagtggctgccttaaaagctctcgataagtattcattaaagagataaaAGATGT---TTCAACCTAGTAGAGTATAGAAGCAAACACAAAGTTCTGTTA-----TAACA-AAAGTG--ATATGGTGGCACAGG--AAGCGACCAA--CACTCAGCATCAGGAAACAAAGGTGATATGAGGTAGGGAAGACAAGGAGATTCATTAGAAGGATACCACGAACTTTGAAGGGACTT-ATACTAAAGCTATGAACTACATACAACAGGCAC----AGCGAGATATAGATTGGGGGGGCCCGAGCAAAGACAATACAAAGGCAGACTTGGCAGAACCTGGCAACGGGTATGAAGGAGAAGAA--GACTACTAGATTTCAACCCCAGGGTACTGTAGGCTAACAAGGAGTGAGCAAGAAAGAGTGGGAAAGGAGAAAGGATCAATTCTAGCAGTCCAAGATGG------------TCCTGATATAAAC--- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80639133 633 + 95678458 ctctctagaggtt--------------------tctgattcactcaaataggggg-aaaaaatcattccttcctcctcccttccccagtctaatacttaactctattgtggtacttatattcaattacaattatctgcttacatatgtattgtctttacagaacatgaacttgttgaggacaggtaattgtccagatctaattcat----------ccagtggctgccttaaaagccctcaataagtatttgttaaagaaataaaAGATGT---TTCAACCTAGTAGAGTATATAAGCAAACACAAAGTTTTGTTA-----TAACA-AAAATG--ATATGGT--TACAGA--AAGCAACCAA--CACTCAGCATCGGGAAACAAAGGTGATATGAGGTAGGGAAGACAAAGAGATTCATT---AGGATGCCACAAACTTTGAAGGGACTTTATACTAAAGCTATGAACTACATACAATAGGCACAGTGAGTGAGACATAGATT-GGGGGGCCCAAGCGAAGACAATCCAAAGGCAGAATTGGCAGAACCTGGCAACGGGTAAGAGTGAGGAGAA--GACTACTAGATTTCAACCTCAAGGTACTGTATGCTAATGAGGAGTGAGCATGAAAGAGTGGGAAAGGAGAAAGGATCAATTCTAGTAGTCCAAGATGT------------TCCTGATATAAAC--- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81065736 634 - 96509753 ctctctagaggtt--------------------tctgattcactcaaataggggg-aaaaaatcattccttcctcctcccttccccaatctaatacttaactctattgtggtacttatattcaattacaattatctgcttacatatgtattgtctttacagaacatgaacttgttgaggacaggtaattgtccagatctaactcat---------cccagtggctgccttaaaagccctcaataagtatttgttaaagaaataaaAGATGT---TTCAACCTAGTAGAGTATATAAGCAAACACAAAGTTTTGTTA-----TAACA-AAAATG--ATATGGT--TACAGA--AAGCAACCAA--CACTCAGCATCGGGAAACAAAGGTGATATGAGGTAGGGAAGACAAAGAGATTCATT---AGGATGCCACAAACTTTGAAGGGACTTTATACTAAAGCTATGAACTACATACAATAGGTACAGTGAGTGAGACATAGATT-GGGGGGCCCAAGCGAAGACAATCCAAAGGCAGAATTGGCAGAACCTGGCAACAGGTAAGAGTGAGGAGAA--GACTACTAGATTTCAACCTCAAGGTACTGTATGCTAATGAGGAGTGAGCAAGAAAGAGTGGGAAAGGAGAAAGGATCAATTCTAGTAGTCCAAGATGT------------TCCTGATATAAAC--- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76323232 634 + 90941950 CTCTCTAGAGGTT--------------------TCTGATTCACTCaaataggggg-aaaaaatcattccttcctcctcccctccccaacctAATACTTAACTCTATTGTGGTACTTATATTCAATTACAATGATCTGCTTACATATGTATTGTCTTTACAGAACATGAACTTGTTGAGGACAGGTAATTGTCCAGATCTAATTCAT---------CCCAGTGGCTGCCTTAAAAGccctcaataagtatttgttaaagaaataaaagatgt---ttcAACCTAGTAGAGTATATAAGCAAACACAGAGTTTTGTTA-----TAAGA-AAAATG--ATATGGT--TACAGA--AAGCGACCAA--CACTCAGCATCGGGAAACAAAGGTGATATGAGGTAGGGAAGACAAAGAGATTCATT---AGGATGCCACAAACTTTGAAGGGACTTTATACTAAAGCTATGAACTACATACAATAGGCACAGTGAGTGAGACATAGATT-GGGGGGCCCAAGTGAAGACAATCCAAAGGCAGAATTGGCAGAACCTGGCAACAGGTAAGAGTGAGGAGAA--GACTACTAGATTTCAACCTCAAGGTACTGTATGCTAATGAGGAGTGAGCAAGAAAGagtgggaaaggagaaaggatCAATTCTAGTAGTCCAAGATGT------------TCCTGATATAAAC--- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18591435 630 + 33263144 ctctctagaggtt--------------------tctgattcactcaaataggggg-aaaaactcattccttcctcctcccctccccaacctaatacttaactctattgtggtacttatattcaattacaattatctgcttacatatgtattgtctttacagaacatgaacttgttgaggacaggtaattgtccagatctaattcat---------gccagtggctgccttaaaagccctcaataagtatttgttaaagaaataaaAGATGT---TTCAACCTAGTAGAGTATATAAGCAAACACAAAGTTTTGTTA-----TAACA-AAAATG--ATATGGT--TACAGA--AAGCGACCAA--CACTCAGCATCAGGAAACAAAGGTGATATGAGGTAGGGAAGACAAAGAGATTCATT---AGGATGCCACAAACTTTGAAGGGACTT----ATAAAGCTATGAACTACATACAATAGGCACAGTGAGTGAGACATAGATT-GGGGGGCCCAAGTGAAGACAATCCAAAGGCAGAATTGGCAGAACCTGGCAACGGGTAAGAGTGAGGAGAA--GACTACTAGATTTCAACCTCAAGGTACTGTATGCTAATGAGGAGTGAGCAAGAAAGAGTGGGAAAGGAGAAAGGATCAATTCTAGTAGTCCAAGATGT------------TCCTGATATAAAC--- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198289685 628 + 210400635 ctctctaggggtt--------------------tctaattcactcaaataagggg-aaaaaatcattccttcttcctaccctccccaatctaaaacttaaagctattgtggtacttacatgttattacaattatttgcttacatatgtat----------gaacatgaactctttgagggtaggtaattgtccaggtctaattcatctttgtat-cccagtgactaccttaaaagctctcaatag----ttattaaagaaataaaAGATGT---TTTAACCTAGTAGA-TATATAAGCAACCACAAACTTTTGTTA-----TGACA-AAAATGATATATGGTAGTACAGG--AAGAGACCAA--CACTCAGCATTGGGAAACAAAGGTGATACGAAGTAGGGAAGATAAGGAGATCCATTAGAAGGATACCACAAACTTTGAAGAGGCTT-ATACTAAAGCTATGAACTACATATGACAGGCAT----AGAGAGATATATATT-AGGGGACC-GAGCTAAGACAATCCAAAGGCAGAATTGGCAGAACCTGGCAACAAGTATGAGGGAGAAGAA--GACTATTAGATTTCAACTCCAGGGTATTGTATGCTAACAAGGAGTGAGCAGGAAGAAGTGGGAAAGGAGAAAGGATCAGTTCTAGCAGTCCAAGATGT------------TCCTGATATAAAC--- i calJac3.chr1 C 0 I 306 s canFam3.chr10 40915182 632 - 69331447 CTTTTTAAATATTTActtcagtcagccattttctctgattcacccaaatagggaa----aaagcattcctgccctttatacccc-----------cgtaagtctcctacagcacttacgttctcttacagtcatctgcttacacaaatactgcttctatagaatgtggactctcagagggcatgtaactgtccaggcctaattaatttctgcatccccagtgacagccttaaaaatgttcaataagtacttgttaaaGGGAAAAAAGAAATACACCCAAGCTCCTGGAGTGTAT----AACTACAGGCTTTTGTTAATTTTTAAGAGAGAAGG--AAATTAG--TACAGGAAAAGCCCCCAACCCATCCAGCATGGGGAAATGTGGGTAACATGAGA-AGGGAAGGTAC----ATCTGTG---ATGACACCAC------------GGCTT-ATGACAGGATTATGAGCTACAGC--AGAGGCAC----AGGAAAGTAC--ATC-AGAGGACAAACGCTGTGGGTAATCTTGGGGAGAGT---CAGAGTCTGGCAACAGGCCTGGGGGAGGATGAGGGGCACCTAGACCTCAGTC-CACGGGGCTGTATAAGAATAGGCAGTGA---------AGTGGGAATGGAGA----ATCAATTCTAGAAGTCCAATTTTCTAGATTATCCTATCCTGATATAAACTAC i canFam3.chr10 I 202 C 0 e mm10.chr15 77140448 71 + 104043685 I a score=14535.000000 s hg38.chr22_KI270876v1_alt 142111 4 + 263666 TAAT s panTro4.chr22 34519548 4 + 49737984 TAAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30936068 4 + 46535552 TAAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100486878 4 - 115148730 TAAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80639766 4 + 95678458 TAAT i rheMac3.chr10 C 0 I 310 s macFas5.chr10 81066370 4 - 96509753 GAAT i macFas5.chr10 C 0 I 310 s papAnu2.chr10 76323866 4 + 90941950 TAAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18592065 4 + 33263144 TAAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198290619 4 + 210400635 taat i calJac3.chr1 I 306 C 0 s canFam3.chr10 40915814 4 - 69331447 TAAT i canFam3.chr10 C 0 C 0 e mm10.chr15 77140448 71 + 104043685 I a score=125222.000000 s hg38.chr22_KI270876v1_alt 142115 36 + 263666 TAGATTCTAT-TTTTTCATATTTGAAGTTCATTCTGT s panTro4.chr22 34519552 36 + 49737984 TAGATTCTAT-TTTTTCATATTTGAAGTTCATTCTGT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30936072 36 + 46535552 TAGATTCTAT-TTTTTCATATTTGAAGTTCATTCTGT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100486882 36 - 115148730 TAGATCCTAT-CTTGTCATATTTGAAGTTCATTCTGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80640080 36 + 95678458 TAGATTCTAC-TTTTTCATATTTGAAGTTCATTCTGT i rheMac3.chr10 I 310 C 0 s macFas5.chr10 81066684 36 - 96509753 TAGATTCTAC-TTTTTCATATTTGAAGTTCATTCTGT i macFas5.chr10 I 310 C 0 s papAnu2.chr10 76323870 36 + 90941950 TAGATTCTAC-TTTTTCATATTTGAAGttcattctgt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18592069 37 + 33263144 TAGATTCTACTTTTTTCATAATTGAAGTTCATTCTGT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198290623 36 + 210400635 tagattgtat-tttttaatatttGAAGTTCATTCTGT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40915818 36 - 69331447 TAGATTTTAC-CTTTCAATATTTGAAGTTCATTTCTT i canFam3.chr10 C 0 C 0 e mm10.chr15 77140448 71 + 104043685 I a score=131867.000000 s hg38.chr22_KI270876v1_alt 142151 32 + 263666 TTTCTAAATGCATTCTAAAATATCTTTGATAG s panTro4.chr22 34519588 32 + 49737984 TTTCTAAATGCATTCTAAAATATCTTTGATAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30936108 32 + 46535552 TTTCTAAATGCATTCTAAAACATCTTTGATAG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100486918 32 - 115148730 TTTCTAAATGCATTCTAAAACATCTTTGATAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80640116 32 + 95678458 TTTCTAAATGCATTCTAAAACATCTTTGATAG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81066720 32 - 96509753 TTTCTAAATGCATTCTAAAACATCTTTGATAG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76323906 32 + 90941950 tttctaaatGCATTCTAAAACATCTTTGATAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18592106 32 + 33263144 TTTCTAAATGCATTCTAAAACATCTTTGATAG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198290659 32 + 210400635 TTTCTGAATGCATTCTAAAACACCCTTGACAG i calJac3.chr1 C 0 C 0 s mm10.chr15 77140519 27 + 104043685 TTTCTA-----ACTCAGAAAGACCCTTGATAG i mm10.chr15 I 71 C 0 s canFam3.chr10 40915854 32 - 69331447 TTTTCAAATGCATTCTAAAAGATCTTTCATAG i canFam3.chr10 C 0 I 203 a score=170976.000000 s hg38.chr22_KI270876v1_alt 142183 46 + 263666 TTATTTC-CAGAGTGTTTTTGGTAATTCATTTTT-TCTTTTTAAATTT s panTro4.chr22 34519620 46 + 49737984 TTATTTC-CAGAGTGTTTTTGGTAATTCATTTTT-TCTTTTTAAATTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30936140 46 + 46535552 TTATTTC-CAGAGTGTTTTTGGTAATTCATTTTT-TCTTTTTAAATTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100486950 46 - 115148730 TTATTTC-CACAGTGTTTCTGGTAATTCATTTTT-CCTTTTTAAATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80640148 45 + 95678458 TTATTTC-CAGGGTGTTT-TGGTAACTCATTTTT-CCTTTTTAAATTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81066752 45 - 96509753 TTATTTC-CAGGGTGTTT-TGGTAACTCATTTTT-CCTTTTTAAATTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76323938 45 + 90941950 TTATTTC-CAGGGTGTTT-TGGtaactcattttt-cctttttaaattt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18592138 45 + 33263144 TTATTTC-CAGGGTGTTT-TGGTAACTCATTTTT-CCTTTTTAAATTT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198290691 46 + 210400635 TTATTTC-CAGAGCGTTTTTGGTAACTAATTTTT-CCTTTTTAATTTT i calJac3.chr1 C 0 C 0 s mm10.chr15 77140546 48 + 104043685 TGATTTCAAAGGGTGTAGTTGGTAAATCATTTTTCCCTTTTTAAGTTT i mm10.chr15 C 0 C 0 s canFam3.chr10 40916089 46 - 69331447 TTATTTC-AAGGGTGTTTGGGGCAATTTATTTTC-CGTTTTTAAATTt i canFam3.chr10 I 203 I 840 a score=6758.000000 s hg38.chr22_KI270876v1_alt 142229 7 + 263666 TA-TTttt s panTro4.chr22 34519666 7 + 49737984 TA-TTttt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30936186 7 + 46535552 TA-TTttt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100486996 8 - 115148730 TATTTttt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80640193 8 + 95678458 GATTTttt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81066797 4 - 96509753 G----TTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76323983 8 + 90941950 gatttttt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18592183 8 + 33263144 GATTTttt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198290737 7 + 210400635 TA-TTttt i calJac3.chr1 C 0 C 0 s mm10.chr15 77140594 7 + 104043685 TA-TTTTT i mm10.chr15 C 0 I 1148 e canFam3.chr10 40916135 840 - 69331447 I a score=2338492.000000 s hg38.chr22_KI270876v1_alt 142236 873 + 263666 tatctttatcaaattaacacatgcacatgatagcaaatcaaataggtaagaagagcttatgattaaaagcagCAGTAGCCTggccaggcgtgttggctcacacctgtaatcccagcactttgggaggccaaggtgggcggatcacctgaggtcaggagttcgagaccagcctggccaacatggcgaaaccccgtctctactaaaaat------attagtggggtgtagtggaggacacctgcaatcccagctacttgggaggctgaggcaggagaactgcttgaa-------------------------------------cctgggaggtggaggtggacgttgcagtgagccgagattgc----gccactgcactccagcctgggg----------------------------------------gacagagtgagactccgtctccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaGCAGTAGTATCCTATCCTTCA--CTCTGTCAGTCCTTTGAGGACTGACCTTCTTTTAATAGTTCCCTAAAAGGCAGAGGTTCCCAGGCCAGAGGCTGCCATTAGGGATTACTGACTGCTCTGACCACCCCCAAGCTTTGGCAACACATACTCAGTACACACCTGATCTACCCATAGGACTGTAGGACCTGGCCTCCTCTCCTGAGGCCGCTGAAGGAAGGGGTCAAGTgagttaactgtttgtatggcaaactttgaccaaaagggggaggagcaggaaatgggaggaaaccataaacacctcttcacaccttctt----tggatggaaaggacagagaagcaatagctctacacaaccttcctgaagacttccagtaaaaccaagcAATCAGCAAGGCCTATTACAAAGAGAGGGccagcctttctgccttgtctcactcttctttccctcctgctttcctgagatggtactccccaataaagtg s panTro4.chr22 34519673 870 + 49737984 tatctttatcaaattaacacatgcacatgatagcaaatcaaataggtaagaagagcttatgacgaaaagcagCAGTAGCCTggccaggcgtgttggctcacacctgtaatcccagcactttgggaggccaaggtgggcggatcacctgaggtcaggagttcgagaccagcctggccaacatggcgaaactccgtctctactaaaaat------attagtggggtgtagtggaggacgcctgcaatcccagctacttgggaggctgaggcaggagaactgcttgaa-------------------------------------cctgggaggtggaggtggacgttgcagtgagccgagattgc----gccactgcactccagcctgggg----------------------------------------gacagagtgagactccgtctcc-aaaaaaaaaaaaaaaaaaaaaaaaaaaaGCAGTAGTATCCTA--CTTCA--CTCTGTCAGTCCTTTGAGGACTGACCTTCTTTTAATAGTTCCCTAAAAGGCAGAGGTTCCCAGGCCACAGGCTGCCATTAGGGATTACTGACTGCTCTGACCACCCCCAAGCTTTGGCAACACATGCTCAGTACACACCTGATCTACCCATAGGACTGTAGGACCTGGCCTCCTCTCCTGAGGCCGCTGAAGGAAGGGGTCAAGTgagttaactgtttgtatggcaaactttgaccaaaagggggaggagcaggaaatgggaggaaaccataaacacctcttcacaccttctt----tggatggaaaggacagagaagcaatagctctacacaaccttcctgaagacttccagtaaaaccaagcAATCAGCAAGGCCTATTACAAAGAGAGGGccagcctttctgccttgtctcactcttctttccctcctgctttcctgagatggtgctccccaataaagtg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30936193 851 + 46535552 tatctttatcaaattaacacatgcacatgatagcaaatcaaataggtaagaagagcttatgatgaaaagcagCAGTAGCCTggccaggcgtgttggctcacacctgtaatcccagtactttgggaggccaaggtgggcagatcacctgaggtcaggatttcgagaccagcctcgccaacatggcgaaaccccgtctctactaaaaat------attagtggggtgtagtggagggcgcctgtaatcccagctacttgggaggctgaggcaggagaactgcttgaa-------------------------------------cctgggaggtggagatggacgttgcagtgagccgagattgc----gccactgcactccagcctgggg----------------------------------------gacagagtgagactctgtctc--------------------aaaaaaaaaGGCAGTAGTATCCTATCCTTCC--CTCTGTCAGTGCTTTGAGGACTGACCCTCTTTTAATAGTTCCCTAAAAGGCAGAGGTTCCCAGGCCAGAGGCTGCCATTAGGGATTACTGACTCCTCTGACCACCCCCAAGCTTTGGCAACACATGCTCAGTACAGACCTGATCTGCCCATAGGACTGTAGGACCTGGCCTCCTCTCCTGAGGCCACTGAAGGAAGGGGTCAAGTGAGTTAACTGTTTGTATGGCAAAC--TGACCAAAAGGGGGAGGAGCAGGAAACGGGAGGAAACCATAAACACCTCTTCACACCTTCTT----TGGATGGAAAGGACAGAGAAGCAATAGCTCTACACAACCTTCCTGAAGACTTCCAGTAAAACCAAGCAATCAGCAAGGCCTATCACAAAGAGAGGGccagtctttctgccttgtctcactcttctttccctcctgccttcctgagatggtactccccaataaagtg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100487004 822 - 115148730 tatctttatcaaattaatacatgcacatgatagcaaatcaaataggt---aagagcttatgaggaaaagcagCAGTAGCCTggccaggcgtgttggctcacacctgtaat-ccagcactttgggaggccaaggtgggcggatcacctgaggtcaggagttggagaccagcctggccaacatggcgaaaccctgtctctactaaaaat------attagtggggtgtagtggagggcgcctgtaatcccggctacttgggaggctgaggcaggagaactgcttgaa------------------------------------ccctgggaggtggaggtggaggttgcagtgagctgagattgt----gccactgcactccagcctgggg----------------------------------------gacagagtgagactctgtctc-----------aaaaaaaaaaaaaaaaaaaGCAGTAGTATCCTATCCTTCC--CTCTGTCAGTCCTTTGAGGACTGACCCTCTTTTAATAGTTCCCTAAAAGGCAGAGGTTCCCAGGCCAGAGGCTGCCATTAGGGATTACTGACTCCTCTGACCACCCCCAAGCTTTGGCAACACATGCTCAATACAGACCTGTTCTGACCATAGGACTGTAGGAGCTGGCCTCCTCTCCTGAGGCCACTGAAGGAAGGGGTCAAGTgagttaac----tgtatggcaaactttgaccaaaagggggaggagcaggaaatgggaggaaaccataaacacctcttcacaccttctt----tggatggaaaggacagagaagcaatagctctacacaaccttcctctagacttccagtaaaaccaagcAATCAGCAAGGCCTATTACAAAGACAGGGCCAGCCTTTCTGCCTTGTCTCACTCTTCTTTCCCTCC--------------------------------- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80640201 846 + 95678458 aatatttatcaaattaatacaagcacataatagcaaatcaaataggtaagaagagcttatgatgaaaagcagCAGTAACCTggccaggcgtgttggctcatgcctgtaatcccagcactttgggaggccaaggaggcctg----cctgtggtcaggagttcgataccagcctggccaacatggtgaaaccccatctctactaaaact------attagcaaggtgtagtggagggcgcctgtaatcccagctacttgggaggctgaggcaggagaatcgtttgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn--------------------------------------------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaaaaa------------------------aaaaaaaaaaaaaaaaaaaaGCAGTAGTTTCCTATCCTTCC--CTCTGTCAGTCCTTTGAGGACTGACCCTCTTTTAATAGTTCCTTAAAAGGCGGAGGTTCCCAGGCCAGA-GCTGCCATTAGGGATTACTGACTCCTCTGACCACTCCCAGGCTTTGGCAACACATGCTCAGTACAGACCTGATCTGCCCACAGGACAGCAGGACCTGGCCTCCTCTCCTGAGGCCACTGAAGGAAGGGGTCAAGTgagttaactgtttgtatggcaaactttgaccaagagggggaggggcaggaaatgggaggaaaccataaacacctcttcacaccttctt----tggatggaaaggacagagaagcaatagctctacacaaccttcctgaagacttccAGTAAAACTAAGCAATCAGCAAGGCCTATTACAAAGACAGGGccagcctttctgc-----------cttctttccctcctgctttcctgagatggtactccccaataaagtg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81066801 845 - 96509753 AATATTTATCAAATTAATACAAGCATATAATAGCAAATCAAATAGGTAAGAAGAGCTTATGATGAAAAGCAGCAGTAACCTggccaggcgtgttggctcacgcctgtaatcccagcactttgggaggccaaggaggcctg----cctgtggtcaggagttcgataccagcctggccaacatggcgaaaccccatctctactaaaact------attagcaaggtgtagtggagggcgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaa-------------------------------------cctgggaggtggag------gttgcagtgagccgagatcgcgccagccactgcattccagcctgggc----------------------------------------gacagagtgagattccgcctc----------aaaaaaaaaaaaaaaaaaaaGCAGTAGTTTCCTATCCTTCC--CTCTGTCAGTCCTTTGAGGACTGACCCTCTTTTAATAGTTCCTTAAAAGGCGGAGGTTCCCAGGCCAGA-GCTGCCATTAGGGATTACTGACTCCTCTGACCACTCCCAGGCTTTGGCAACACATGCTCAGTACAGACCTGATCTGCCCACAGGACAGCAGGACCTGGCCTCCTCTCCTGAGGCCACTGAAGGAAGGGGTCAAGTGAGTTAACTGTTTGTATGGCAAACTTTGACCAAGAGGGGGAGGGGCAGGAAATGGGAGGAAACCATAAACACCTCTTCACACCTTCTT----TGGATGGAAAGGACAGAGAAGCAATAGCTCTACACAACCTTCCTGAAGACTTCCAGTAAAACTAAGCAATCAGCAAGGCCTATTACAAAGACAGGGccagcctttctgc-----------cttctttccctcctgctttcctgagatggtgctccccaataaagtg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76323991 837 + 90941950 aatatttatcaaattaataCAAGCACATAAT-GCAAATCAAATAGGTAAGAAGAGCTTATGATGAAAAGCAGCAGTAACctggccaggcgtgttggctcacgcctgtaatcccagcactttgggaggccaaggaggcctg----cctgaggtcaggagttcgacaccagcctggacaacatggtgaaaccccatctctactaaaact------attagCAAGGTGtagtggagggcgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaa-------------------------------------cctgggaggtggag------gttgcagtgagccgagatcgcgccagccactgcattccagcctgggc----------------------------------------gacagagtgagattccgcctc-----------------aaaaaaaaaaaaagcagtagttTCCAGTCCTTCC--CTCTGTCAGTCCTTTGAGGACTGACCCTCTTTTAATAGTTCCTTAAAAGGCGGAGGTTCCCAGGCCAGA-GCTGCCATTAGGGATTACCGACTCCTCTGACCACTCCCAGGCTTTGGCAACACATGCTCAGTATAGACCTGATCTGCCCACAGGACAGCAGGACCTGGCCTCCTCTCCTGAGGCCACTGAAGGAAGGGGTCAAGTGAGTTAACTGTTTGTATAGCAAACTTTGACCaagaggaggaggggcaggaaaTGGGAGGAAACCATAAACACCTCTTCACACCTTCTT----TGGATGGAAAGGACAGAGAAGCAATAGCTCTACACAACCTTCCTGAAGACTTCCAGTAAAACTAAGCAATCAGCAAGGCCTATTACAAAGACAGGGCCAGCCTTTCTGC-----------CTTCTTTCCCTCCTGCTTTCCTGAGATGGTACTCCCCAATAAAGTG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18592191 842 + 33263144 aatatttatcaaattaatacaagcacataatagcaaatcaaataggtaagaagagcttatgatgaaaagcagCAGTAACCTggccaggcgtgttggctcacgcctgtaatcccagcactttgggaggccaaggaggcctg----cctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaact------attagcaaggtgtagtggagggcgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaa-------------------------------------ccagggaggtggag------gttgcagtgagccgagatcacgccagccactgcattccagcctgggt----------------------------------------gacagagtgagattccgcctc-------------aaaaaaaaaaaaaaaaGGCAGTAGTTTCCTATCCTTCC--CTCTGTCAGTCCTTTGAGGACTGACCCTCTTTTAAAAGTTCCTTAAAAGGCGGAGGTTCCCAGGCCAGA-GCTGCCATTAGGGATTACTGACTCCTCTGACCACTCCCAGGCTTTGGCAACACACGCTCAGTACAGACCTGATCTGCCCACAGGACAGCAGGACCTGGCCTCCTCTCCTGAGGCCACTGAAGGAAGGGGTCAAGTGAGTTAACTGTTTGTATGGCAAACTTTGACCAAGAGGGGGAGGGGCAGGAAATGGGAGGAAACCATAAACACCTCTTCACACCTTCTT----TGGATGGAAAGGACAGAGAAGCAATAGCTCTACACAACCTTCCTGAAGACTTCCAGTAAAACTAAGCAATCAGCAAGGCCTATTACAAAGACAGGGccagcctttctgc-----------cttctttccctcctgctttcctgagatggtactccccaataaagtg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198290744 844 + 210400635 tacctttatcaaattaatacatacacatgatagcaaatcaaataggtaagaagagcttatgatgaaaagcagCAGTATCCTggccaggcatgttggctcatgcctgtaatcctagcgctttgggagg----------cagatcacctgaggtcag---ttcgagaccatcctggccaacatggtgaaaccctgtctctactaaaaatataaaaattagccaggtgtagaggcaggcgcctgtaatcccagctacttgggaagctgaggcaggagaattgcttaaa-------------------------------------cctgggaggtggag------gtttcaatgagccaagatcgt----gccgctacactccagtctgtgt----------------------------------------gacagag----actccgtttc----------------aaaaaaaaaaaaaGACAGTAGTATCCTATCCTTCCCTCTCTGTTAGTCCTTTGAAGACAGTCCCTCTTTTAATAGTTCCTTAAAAGGCAGAGGTTCTCAGGCCAAAGGCTGCCATTAGGGATTACTGACTCCTCTGACCAC-CCCAAGCTTTGGCAACAAATGCTCAGTACAGACCTGATCTGCCTACC-GACTGCAGGACCTGGCCTCCCAACCTGAGGCCACTGAAGGAAGGGGTCAAGTGAGTTATCTCTTTGAATGGCAAACTTTGACCAAAAGGGGGAGGAGCAGGAAATGGGAGGAAACCATAAACACCTCTTCACATCTTCCTAAGAGGGATAGAAAGAACAGAAAAGCAATAGCTCTACACAACCTTCCTGAAGACTTCCAGTAAAACCAAGCAATCAGCAAGGCCTACTACAAAGCCTGGGCCAGcctttctgccttgtgtcactctcctttccctcctgctttcctaagagggtactccccaaaaaagtg i calJac3.chr1 C 0 C 0 e mm10.chr15 77140601 1148 + 104043685 I e canFam3.chr10 40916135 840 - 69331447 I a score=2058680.000000 s hg38.chr22_KI270876v1_alt 143109 636 + 263666 ttagtgggtaaggtttttgtttcaggtt--gttttctagagaacactagctaagaACAGAGTCTATGacttgtgtcttgtattttccattttggtgaattaaacctctactttttggga-gcatctccaactctatttggctatccttctactgtgtgctttccattgacaataatgttctaaatctc-------cttttgcattctctaattgtttgctcttcattatacctagtattggttttataaatg---agtatt--------tatgagtat-----tttagttagaagattcctttaaagttctcttctgtttcctgcattatcttttgcccctaggttcaggttttctttttg-ttttttctggtctctttcatgctaaaagttcctctaagacttctaatgatcctCACGTACTGGTAACCCAGGTAAAAGGACTT-GTTAGCTAGTATGAGTTTCCTCT------------GTGAATTTGCTTTCTGATTACATCTCTCTTTGGAATTAAAATTCTAA-TGGGAACTCAGTATAAGAC----------AGAGAAGAGCATGTC-ACTGGCAGGCTTTGTGTTAGTGTAAGCCACT-AGCAAAGTGCAGAATGCCCTCCCTCTCCATCCCCCTAAATATGAGACTAAAGGAAGAGGTGCCAATATCTAACACACACACAA s panTro4.chr22 34520543 636 + 49737984 ttagtgggtaaggtttttgtttcaggtt--gttttctagagaacactagctaagaACAGAGTCTATGacttgtgtcttgtattttccattttggtgaattaaacctctactttttggga-gcatctccaactctatttggctatccttctactgtgtgctttccattgacaataatgttctaaatctc-------cttttgcattctctaattgtttgctcttcattatacctagtattggttttataaatg---agtatt--------tatgagtat-----tttagttagaagattcctttaaagttctcttctgtttcctgcattatcttttgcccctaggttcaggttttctttttg-ttttttctggtctctttcatgctaaaagttcctctaagacttctaatgatcctCACGTACTGGTAACCCAGGTAAAAGGACTT-GTTAGCTAGTATGAGTTTCCTCT------------GTGAATTTGCTTTCTGATTATATCTCTCTTTGGAATTAAAATTCTAA-TGGGAACTCAGTATAAGAC----------AGAGAAGAGCATGTC-ACTGGCAGGCTTTGTGTTAGTGTAAGCCACT-AGCAAAGTGCAGAATGCCCTCCCTCTCCATCCCCCTAAATATGAGACTAAAGGAAGAGGTGCCAATATCTAACACACACACAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30937044 636 + 46535552 ttagtggataaggtttttgtttcaggct--gttttctagagaacactagctaagaACAGAGTCTGTGAGTTGTGtcttgtattttccattttggtgacttaaacctctactttttggga-gcatctccaactctatttggctatccttctactgtgtgctttccgttgacaataatgttctaaatctc-------cttttgcattctctaattgtttcctcttcattatacctagtattggttttataaatg---agtatt--------tatgagtat-----tttagttagaagattcctttaaagttctcttctgtttcccgcattatcttttgcccctaggctcaggttttctttttg-tttcttctggtctctttcatgctaaaagttcctctaagacttctaatgatcctCACATACTGGTAACCCAGGTAAAAGGACTT-CTTAGCTAGTACGAGTTTCCTCT------------CTGAATTTGCTTTCTGATTACATCTCTCTTTGGAATTAAAATTCTAA-TGGGAACTCAGTATAAGAC----------AGAGAAGAGCATGTC-ACTGGCAGGCTTTGTGTTAGTGTAAGCCACT-AGCAAAGTGCAGAATGCCCTCCCTCTCCATCCCCCTAAATATGAGGCTAAAGGAAGAGGTGCCAATATCTAATACACACACAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100487826 636 - 115148730 -TAGTGGGTAAGGTTTTTGTTTCAGGCTCAGTTTTCTAGAG-ACACTAGCTAAGAACAGAGTCTAtgacttgtgtcttgtattttccattttggtgacttaaacctctactttttggga-gcatccccaactctatttggctatccttctactttgtgctttcc-ttgacaataatgttctaaatctc-------cttttgcattctctaattgtttcctcttcattatacctagtactggttttataaatg---agtatt--------tatgagtat-----tttagttagaagattcctttaaggttctcttctgtttcctgcattatcttttgcccctaggttcaggttttctttttgtttttttctggtctctttcatgctaaaagttcctctaagacttctaatgatcctcatatactggtaacccaggtaaaaggactt-gttagctagtatgaatttcctct------------gtgaatttgctttctgattacatctctctttggaattaaaattctaa-tgggaattcagtataagac----------agagaagagcatgtc-actggcaggctttgttttagtgtAAGCCACT-AGCGAAGTGCAGAATGCCCTCCCTCTCCATCCCCCTAAATATGAGACTAAACGAAGAGGTGCCAATATCTAACACACACACAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80641047 618 + 95678458 ttagtgggtaaggtttttgtttcaggctcagttttctagagaacactagctaagaACACAGTCTATGacttctgtcttgtattttccattttggtgacttaaacctctactttttggga-acatctccaactctatttggctatccttctactgtgtgctttctattgacaataatgctctaaatctc-------cttttgtattctctaattgtttccttttcattatatctagtattggttttataa---------------------atgcgtat-----tttagttagaagattcctttaaagttctcttctgtttcctgcattatttgttgcccctaggttcaggttttctttttg-tttcttctggtctctttcatgctaaaagttcctctcagacttctaatgatcctcacgcactggtaacccaggtaaaaggactt-gttagctagtatgagtttcctct------------gtgaatttgctttccgattagatctctctttggaattaaaattctaa-tgggaactcagtataagac----------agagaagagcatgtc-actggcaggctttgttttagtgtAAGCCACT-AGCAAAGTGCAAAATG----------CCATCCCCCTAAATATGAGACTAAAGGAAGGGGTGCCAATATCTAACACACACACAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81067646 618 - 96509753 ttagtgggtaaggtttttgtttcaggctcagttttctagagaacactagctaagaACACAGTCTATGacttctgtcttgtattttccattttggtgacttaaacctctactttttggga-acatctccaactctatttggctatccttctactgtgtgctttctattgacaataatgctctaaatctc-------cttttgtattctctaattgtttccttttcattatatctagtattggttttataa---------------------atgcgtat-----tttagttagaagattcctttaaagttctcttctgtttcctgcattatttgttgcccctaggttcaggttttctttttg-tttcttctggtctctttcatgctaaaagttcctctcagacttctaatgatcctCACGCACTGGTAACCCAGGTAAAAGGACTT-GTTAGCTAGTATGAGTTTCCTCT------------GTGAATTTGCTTTCTGATTAGATCTCTCTTTGGAATTAAAATTCTAA-TGGGAACTCAGTATAAGAC----------AGAGAAGAGCATGTC-ACTGGCAGGCTTTGTTTTAGTGTAAGCCACT-AGCAAAGTGCAAAATG----------CCATCCCCCTAAATATGAGACTAAAGGAAGGGGTGCCAATATCTAACACACACACAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76324828 609 + 90941950 TTAGTGGGTAAGGTTTTTGTTTCAGG---------CTAGAGAACACTAGCTAAGAACACAGTCTATGACTTGTGTCTTGTATTTTCCATTTTGGTGACTTAAACCTCTACTTTTTGGGA-ACATCTCCAACTCTATTTGGCTATCCTTCTACTGTGTGCTTTCTATTGACAATAATGCTCTAAATCTC-------CTTTTGTATTCTCtaattgtttccttttcattATATCTAGTATTGGTTTTATAA---------------------ATGAGTAT-----TTTAGTTAGAAGATTCCTTTAAAGTTCTCTTCTGTTTCCTGCATTATTTGTTGTCCCTAggttcaggttttctttttg-tttcttctggtCTCTTTCATGCTAAAAGTTCCTCTCAGACTTCTAATGATCCTCACGCACTGGTAACCCAGGTAAAAGGACTT-GTTAGCTAGTATGAGTTTCCTCT------------GTGAATTTGTTTTCCGATTAGATCTCTCTTTGGAATTAAAATTCTAA-TGGGAACTCAGTATAAGAC----------AGAGAAGAGCATGTC-ACTGGCAGGCTTTGTTTTAGTGTAAGCCACT-AGCAAAGTGCAGAATG----------CCATCCCCCTAAATATGAGACTAAAGGAAGGGGTGCCAAtatctaacacacacacaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18593033 615 + 33263144 ttagtgggtaaggtttttgtttcaggctcagttttctagagaacattagctaagaACACAGTCTATGacttgtgtcttgtattttccattttggtgacttaaacctctactttttggga-acatctccaactctatttggctatccttctactgtgtgctttctattgacaataatgctctaaatctc-------cttttgtattctctaattgtttccttttcattatatctagtactggttttataa---------------------atgagtat-----tttagttagaagattcctttaaagttctcttctgtttcctgcattatctgttgcccctaggttcaggttttctttttg-tttcttctggtctctttcatgctaaaagttcctctcagacttctaatga---tcACACACTGGTAACCCAGGTAAAAGGACTT-GTTAGCTAGTATGAGTTTCCTCT------------GTGAATTTGCTTTCTGATTAGATCTCTCTTTGGAATTAAAATTCTAA-TGGAAACTCAGTATAAGAC----------AGAGAAGAGCATGTC-ACTGGCAGGCTTTGTTTTAGTGTAAGCCACT-AGCAAAGTGCAGAATG----------CCATCCCCCTAAATATGAGACTAAAGGAAGGGGTGCCAATATCTAACACACACACAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198291588 630 + 210400635 ttagtgggtaagg-gtttgtttcagactcagttttccagcgaacaatagctaaagac--aGTCTATGActtgtgtcttgtattttccattttggtgtcttaaacctctacttttgggga-gtatctccaattctatttggctatacttctactgtgtgctttccattgacaataatgttctaaatctc-------cttttgcattctctaattgttt----ttcattacacctagtactgcttttataaatgt-taatatcttccagaatctgagtat-----tttagttagaagacttctttaaacttctcttctgtttcctgcattttctgttg-ccctaggttcaggatttctttttg-t---------tctctttcatgctaaaagttcctctcacacgtctaatgatcctCATGCACTAGTAACCCAGGTAAAAGGACTT-GTTAGCTAGTATGGGTTTCCTCT------------GTGAATTTGCTTTCTGATTAGCTCTCTCCTTGGAATTAAAATTGCAA-TGGGAATTCAGTATAAGTT----------AGAGAAGAGCATGTC-ACTGGCAGGCTTTGTTTTAGTGTAAGCCACT-AGCAAAGTGAAGAATG-CCCCCCGCTTCATTCCCCTACATATGAGACTAAAGGAAGGGGTGCCAATATCTAACACACACACAA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40916975 652 - 69331447 TTAGCAGGTAAGG-CTTTGTCTCTGTCTTTCCTCTCTAAAGAACACTGACTGA---------CTGTGGAAATCAtcttgtaatttccatctttttgtcttaaaactctacattttgggaggtatcttcaattctattt-tctatttgtttgaggcaggttttcttttgacaatcatattcctgatccccaaccctctcatgctttcttaaattgttcccttttcattatacttggtaatggttttatcaatgtattatctt--------cctgaatcttactatttagttggaatgctgctttaaatttc---tttattccttggattgtctgtttccccgagggtcagcttttctttttg-tttcttctggtccctttcatgctgaaagttcctctcatatggctaatggtctaaatgcactaatgatccaggtaataagacttggttagctggtatggatcttctctgctattgtttaagtaaatctattttctgattagttctctc--tagaattaaaattctaactgggaactcAGTATGAGACCCaaaaaaaaaaaaaaaaaaaaGTCAACCAGCAGGCTTCATTTTAGTGTAAGCTGCTAAGAAAAGTGTGGAATG---------ATCTCCTCCCCAAATGTAAGACTAAAGGAAGAGTTGCCAATACCTAATACAAAAA--- i canFam3.chr10 I 840 C 0 e mm10.chr15 77140601 1148 + 104043685 I a score=40555.000000 s hg38.chr22_KI270876v1_alt 143745 9 + 263666 AATTAAATT s panTro4.chr22 34521179 9 + 49737984 AATTAAATT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30937680 9 + 46535552 AATTAAATT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100488462 9 - 115148730 AATTAACTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80641665 9 + 95678458 AATTAAATT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81068264 9 - 96509753 AATTAAATT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76325437 9 + 90941950 aattaaatt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18593648 9 + 33263144 AATTAAATT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198292218 9 + 210400635 AATTAAATT i calJac3.chr1 C 0 C 0 s mm10.chr15 77141749 9 + 104043685 AGTTAAATC i mm10.chr15 I 1148 C 0 s canFam3.chr10 40917627 9 - 69331447 AATTAAATT i canFam3.chr10 C 0 I 53 a score=136240.000000 s hg38.chr22_KI270876v1_alt 143754 38 + 263666 TCCCCAAACATTCTGATCAACTTCTTTGGAGACAAACA s panTro4.chr22 34521188 38 + 49737984 TCCCCAAACATTCTGATCAACTTCTTTGGAGACAAACA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30937689 38 + 46535552 TCCCCAAACATTCTGATCAACTTCTTTGGAGACAAACA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100488471 38 - 115148730 TCCCCAAACATTCTGATCAATTTCTTTGGAGACAAACA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80641674 38 + 95678458 TCCCCAAACATTCTGATCAACTTCTTTGGAGACAAACA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81068273 38 - 96509753 TCCCCAAACATTCTGATCAACTTCTTTGGAGACAAACA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76325446 38 + 90941950 tcCCCAAACATTCTGATCAACTTCTTTGGAGACAAACA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18593657 38 + 33263144 TCCCCAAACATTCTGATAAACTTCTTTGGAGACAAACA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198292227 34 + 210400635 CTCCCAAACATTCTGATCAACTTCTTTGAAG----ACA i calJac3.chr1 C 0 C 0 s mm10.chr15 77141758 38 + 104043685 TCCCCAAACATGCTCATCGGGTTCTTTGGAGAGAAGCA i mm10.chr15 C 0 I 1 e canFam3.chr10 40917636 53 - 69331447 I a score=479711.000000 s hg38.chr22_KI270876v1_alt 143792 177 + 263666 CTGTTTTATGTTTTGtttttcctttgggttgtcttttttttttt----------tttt-----gagagtgagtctcactctgtcgcccaggctgga--gtgcagtggcacaatcctagctcactgcaacttccacct-ccgggttcaagtgattctcctgcctcagcctcccaagtagctgggattataggcacc s panTro4.chr22 34521226 174 + 49737984 CTGTTTTATGTTTTGtttttcctttgggttgtc---ttttgttt----------tttt-----gagagtgagtctcactctgtcgcccaggctgga--gtgcagtggcacaatcgtagctcactgcaacttccgcct-ctgggttcaagtgattctcctgcctcagcctcccaagtagctgggattataggcacc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30937727 182 + 46535552 CCGTTTTATGTTTTGTTTTTCCTTTGGGTTGTCttttttttttt----------ttttttttggagagtgagtctcactctgtcgcccaggctgga--gtgcagtggcacaatcctggctcactgcaacttccgcct-ccgggttcaagtgattctcctgcctcagcctcccaagtagctgggaatacaggcacc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100488509 177 - 115148730 CTGTTTTATGTTTTGTTTTTCCTTTGAGtttttttttttttttt----------tttt-----ttgagtgagtctcgctctgttgcccaggctgga--atgcagtagcacaatcccagctcactgcaacttccgcct-ctgggttcaagcgattctcctgcctcagcctcccaagtagctgggattacaggcacc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80641712 178 + 95678458 CTGTTTCATGTtttatttttcctttgggttttcttttttttttt-----------------gagagagagagtcttgctctgtcgtccaggctggagtgtgcagtggcacaatcccggctcactgcaacttccgcctcccgggttcaagcaattctcctgcctcagcctcccaagtagctgggattacaggcacc i rheMac3.chr10 C 0 M 196 s macFas5.chr10 81068311 178 - 96509753 CTGTTTCATGTtttatttttcctttgggttttcttttttttttt-----------------gagagagagagtcttgctctgtcgtccaggctggagtgtgcagtggcacaattccggctcactgcaacttccgcctcccgggttcaagtaattctcctgcctcagcctcccaagtagctgggattacaggcacc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76325484 184 + 90941950 ctgtttcatgttttatttttcctttgggttttcttttttttttt----------tttt-gagagagagagagtcttgctctgtcgtccaggctggagtgtgcagtagcacaatcctggctcactgcaacttccgcctcccgggttcaagtaattctcctgcctcagcctcccaagtagctgggattacaggcacc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18593695 194 + 33263144 CTGTTTCATGTTTTATTTTTCCTTTGGGTTttctttcttttttttttttttttttttt-ttgagagagagagtcttgctctgtcgtccaggctggagtgtgcagtggcacaatcccggctcactgcaacttccgcctcccgggttcaagtaattctcctgcctcagcctcccaagtagctgggattacaggcacc i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198292261 173 + 210400635 CTGTTTTATGttttgtttttccattg-----ttttttgtttttg----------tttt-----gagaaggagtctcactttgtcacccaggctgga--gtgcagtggcacaatcttggctcactgcaacctctgcttcctgggttcaagcaattctcctgcctcagcctcccaagtagctgggattacagacgcc i calJac3.chr1 C 0 C 0 e mm10.chr15 77141796 1 + 104043685 I e canFam3.chr10 40917636 53 - 69331447 I a score=8531.000000 s hg38.chr22_KI270876v1_alt 143969 5 + 263666 tgcca s panTro4.chr22 34521400 5 + 49737984 tgcca i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30937909 5 + 46535552 tgcca i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100488686 5 - 115148730 tgcca i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81068489 5 - 96509753 cacca i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76325668 5 + 90941950 cacca i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18593889 5 + 33263144 cacca i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198292434 5 + 210400635 catca i calJac3.chr1 C 0 C 0 e mm10.chr15 77141796 1 + 104043685 I e canFam3.chr10 40917636 53 - 69331447 I e rheMac3.chr10 80641890 196 + 95678458 M a score=406759.000000 s hg38.chr22_KI270876v1_alt 143974 143 + 263666 ccacgcctggctaatttttgcatttttagtagagac-agggtttcaccatgttggccaggct-ggtctcca---cctgacctcaggtgatccgcccgcctcggcctcccaaagtgctgagattacaggcatgagccaccgcatccggc s panTro4.chr22 34521405 143 + 49737984 ccacgcctggctaatttttgtatttttagtagagac-ggggtttcaccatgttggccaggct-ggtctcca---cctgacctcaggtgatccgcccgcctcggcctcccaaagtgctgagattacaggcatgagccaccgcatccggc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30937914 143 + 46535552 ccacgcctggctaatttttgtatttttagtagagac-ggggtttcaccatgttggccaggct-ggtctcca---cctgacctcaggtgatccgcccacctcggcctcccaaagtgctgagattacaggcatgagccaccacatccggc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100488691 144 - 115148730 ccacgcctggctaatttttgtatttttagtagagat-ggggtttcaccatgttggccaggctgggtctcca---cctgaccgcgggtgatccgcctgcctcggcctcccaaagtgctgagattacaggcatgagccaccgcgtccggc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80642090 144 + 95678458 ccacgcccagctaatttttgtatttttagtagagacgggggtttcaccatgttagtcaggct-ggtctcga---tctgacctcaggtgatccactcgcctcagactcccaaagtgctaggattacaggcattagccaccgcgcccggc i rheMac3.chr10 M 196 C 0 s macFas5.chr10 81068494 143 - 96509753 ccacacccagctaatttttgtatttttagtagagac-ggggtttcaccatgttggccaggct-ggtctcga---tctgacctcaggtgatccactcgcctcagactcccaaagtgctaggattacaggcattagccaccgcgcccggc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76325673 143 + 90941950 ccacacccagctaatttttgtatttttagtagagac-ggggtttcaccatgttggccaggct-ggtctcga---tctgacctcaggtgatccactcgcctcagactcccaaagtgctaggattacaggcattagccaccgcgcccagc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18593894 143 + 33263144 ccacacccagctaatttttgtatttttagtatagac-ggggtttcaccatgttggccaggct-ggtctcga---tctgacctcaggtgatccactcgcctcagactcccaaagtgctaggattacaggcattagccaccgcgcccggc i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198292439 145 + 210400635 ccacccccggctaa-ttttgtatttttagtagagat-gaagtttcaccgtattggccaggct-agtctcgaactcctgacttcaggtgatctgcccgtcttggcctcccaaagtgccaggattataggcataagccacgacccccagc i calJac3.chr1 C 0 C 0 e mm10.chr15 77141796 1 + 104043685 I e canFam3.chr10 40917636 53 - 69331447 I a score=3321.000000 s hg38.chr22_KI270876v1_alt 144117 1 + 263666 c s panTro4.chr22 34521548 1 + 49737984 c i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30938057 1 + 46535552 c i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100488835 1 - 115148730 c i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80642234 1 + 95678458 c i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81068637 1 - 96509753 c i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76325816 1 + 90941950 c i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18594037 1 + 33263144 c i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198292584 1 + 210400635 c i calJac3.chr1 C 0 C 0 s canFam3.chr10 40917689 1 - 69331447 T i canFam3.chr10 I 53 C 0 e mm10.chr15 77141796 1 + 104043685 I a score=2339952.000000 s hg38.chr22_KI270876v1_alt 144118 706 + 263666 TTGTTTTTCC-TTTGTTAATGCTAGAGAAAGGGGATGGCATAGTACTTGCTGACTACTGCCACTGGGAAGGGGTTGGAAAGGGTTTGGCAATGCCAGGTAACTGAGTTATCCC--CTAAATAAACACTGAATTCCT--CTGTTTTC------------TGTCTC--TTTCATTTTTGCTCAGAGA-------------GCTCCCATGGGTTCCCCCTGGACAGACTGGCTTCCATAACACTAGCAAGCAGCCTCCTTGTATTCACCAACAGGCATCT-GCTTATTCTTCAtttcatccaactattggttctcatttgtt-----ttagcttttccagaaattta-ataactctcttg-tatattag---tgct---acatttcacctttt--------------------------tctatttgctattgctgattta---ttttttgt-acttctatactgttatttcaggggagtcttgtaagagatgtgaggcaaatgaaagcatctatctaccatcttgacccagaagTAATGATTTATTTTCTGCAAAACAAG----ATTTCAACCATAAATGAGTTCTGTTAATTCCAGTTTCCTGTATATATTTGAGAAACGTTAAATAACTAT-TAAACATTTATGTTTCTTT---AAAAAACTTTTAAGAACTCGAAGATTTATTAAAAGAAAATTAGAGAAGATTAAAAGGAAAATAAGAAGTGTTTACTACAATTTTTAAAACTGCCTGTATACTTATGCTTTAATAAATTAGACA-------CATTTAAATTACA s panTro4.chr22 34521549 708 + 49737984 TTGTTTTTCC-TTTGTTAATGCTAGAGAAAGGGGATGGCATAGTACTTGCTGACTACTGCCACTGGGAAGGGGTTGGAAAGGGTTTGGCAATGCCAGGTAACTGAGTTATCCC--CTAAATAAACACTGAATTCCT--CTGTTTTC------------TGTCTCTTTTTCATTTTTGCTCAGAGA-------------GCTCCCATGGGTTCCCCCTGGACAGACTAGCTTCCATAACACTAGCAAGCAGCCTCCTTGTATTCACCAACAGGCATCT-GCTTATTCTTCAtttcatccaacaattggttctcatttgtt-----ttagcttttccagaaattta-ataactctcttg-tatattag---tgct---acatttcacctttt--------------------------tctatttgctattgctgattta---ttttttgt-acttctatactgttatttcagtggagtcttgtaagagatgtgaggcaaatgaaagcatctatctatcatcttgacccagaagTAATGATTTATTTTCTGCAAAACAAG----ATTTCAACCATAAATGAGTTCTGTTAATTCCAGTTTCCTGTATAGATCTGAGAAACGTTAAATAACTAT-TAAACATTTATGTTTCTTT---AAAAAACTTTTAAGAACTCGAAGATTTATTAAAAGAAAATTAGAGAAGATTAAAAGGAAAATAAGAAGTGTTTACTACAATTTTTAAAACTGCCTGTATACTTAAGCTTTAATAAATTAGACA-------CATTTAAATTACA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30938058 720 + 46535552 TTGTTTTTCC-TTTGTTAATGCTAGAGAAAGGGGATGGCATAGTACTTGCTGACTACTGCCACTGGGAAGGGGTTGGAAAGGGTCTGGCAATGCCAGGTAACTGAGTTATCCC--CTAAATAAACACTGAATTCCT--CTGTTTTCTTTCCTCTGTTTTGTCTCTTTTTCATTTTTGCTCAGAGA-------------GCTCCCACGGGTTCCCCCTGGACAGACTGGCTTCCATACCACTAGCAAGCAGCCTCCTTGTATTCACCGACAGGCATCT-GCTTATTCTTCATTTCATCCAACAATTGGTTCTTATTTGTT-----TTAGCTTTTCCAGAAATTTA-ATAACTCTCTTG-TATATTAG---TGCT---ACATTTCACCTTTT--------------------------TCTATTTGCTATTGCTGATTTA---TTTTTTGT-ACTTCTATACTGTTATTTCAGTGGAGTCTTGTAAGAGATGTGAGGCAAATGAAAGCATCTATCTATCATCTTGACCCAGAAGTAATGATTTATTTTCTGCAAAACAAG----ATTTCAACCATAAATGAGTTCTGTTAATTCCAGTTTCCTGTATAGATTTGAGAAACGTTAAATAACTAT-TAAACATTTATGTTTCTTT---AAAAAACCTTTAAGAACTCGAAGATTTATTAAAAGAAAATTAGAGAAGATTAAAAGGAAAATAAAAAGTGTTTACTACAATTTTTTAAACTGCCTGTGTACTTATGCTTTAATAAATTAGACA-------CATTTAAATTACA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100488836 733 - 115148730 TTGTTTTTCC-TTTGTTAATGGTAGAGAAAAGGGGTGGCATAGTAATTACTGACTACTGCCACTGGGAAGGGGTTGGAAAGGGTCTGGCAATGCCAGGTAACTGAGTTATCCC--CTAAATAAACACTGAATTCTT--CTGTTTTC------------TGTCTGTTTTTCATTTTTGCTCAGAGA-------------GCTCCCACGGGTTCCCCCTGGGCAGACTGGCTTCCATACCACTAGCAAGCAGCCTCCTTGTATTCACCGACAGGCATTT-GCTTATTCTCCATTTCATCCAACAATTGGTCCTCATTTGTT-----TTAGCTTTTCCAGAAATTTA-ATAACTCTCCTGTTATACTAG---TGCT---ACATTTCACCTTTTCATTTTGCAGATGAAAAACTGAAAAATCTATTTGCTATTGCTGGTTTA---TTTTTTGT-ACTTCTATGCTGTTATTTCAGTGGAGTCTTATAAGAGATGTGAGACAAATGAAAGCATCTATCTATCATCTTGACCCAGAAGTCATGATTTATTTTCTGCAAAACAAG----ATTTCAACCATAAATGAGTTCTGTTAATTCCAGTTTCCTGTATAGATTTGAGAAACGTTAAATAACTAT-TAAACATTTATGTTTCTTT---AAAAAACCTTTAAGAACTCGAAGATTTATTAAAAGAAAATTAGAGAAGATTAAAAGGAAAATA--AAGTGTTTACTACAATTTTTGAAACTGCCTGTGTACTTATGCTTTAATAAATTAGACA-------CATTTAAATTACA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80642235 706 + 95678458 TTGTTTTTCC-TTTGTTAATGCTAGAGAAAGGGGGTGGCATAGTATTTGCTGACTACTGCCCCTGGGAAGGGGTTGGAAAGGCTCTGTCAGTGCCAGGTAACTGAGCTATCCC--CTAAATAAACACTGAATTC----CTGCTTTC------------TGTCTCTTTTTCATTTTTGCTCACAGA-------------GCTCCCATGGGTTCCCCCTAGGCAGACTGGCTTCCACACCACTAGCAAGCAGCCTCCTTGTATTCACTGACAGGCATCT-GTTTATTCTCCATTTCATCCCTCAATTGGTCCTCATTAGCT-----TTAGCTTTTCCAGAAATTTA-GTAACTCTCTTG-tttattag---tgtt---acatctcacctttt--------------------------tctatttgctattgctgattta---ttttttgt-acttctgtactgttatttcagtggagtcttataagagatgtgaggcaaatgaaagcatctatctatcatcttcacccagaagtcATGATTTATTTTCTGCAAAACAAG----ATTTCAACCATAAATGAGTTCTGTTAATTCCAGTTTCCTGTATAGATTTGAGAAAGGTGAAATAACTAT-TAAACATTTATGTTTCTTT-AAAAAAAACCTTTAACAACTCGAAGATTTATTAAAAGAAAATTAGAGAAGATTAAAAGGAAAATA--AAGTGTTTACTACAATTTTTGAAACCGCCTGGGTACTTATGCTTTAATAAATTAGACA-------CATTTAAATTACA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81068638 706 - 96509753 TTGTTTTTCC-TTTGTTAATGCTAGAGAAAGGGGGTGGCATAGTATTTGCTGACTACTGCCCCTGGGAAGGGGTTGGAAAGGCTCTGTCAGTGCCAGGTAACTGAGCTATCCC--CTAAATAAACACTGAATTC----CTGCTTTC------------TGTCTCTTTTTCATTTTTGCTCACAGA-------------GCTCCCATGGGTTCCCCCTAGGCAGACTGGCTTCCACACCACTAGCAAGCAGCCTCCTTGTATTCACTGACAGGCATCT-GTTTATTCTCCATTTCATCCCTCAATTGGTCCTCATTAGCT-----TTAGCTTTTCCAGAAATTTA-GTAACTCTCTTG-TTTATTAG---TGTT---ACATCTCACCTTTT--------------------------TCTATTTGCTATTGCTGATTTA---TTTTTTGT-ACTTCTGTACTGTTATTTCAGTGGAGTCTTACAAGAGATGTGAGGCAAATGAAAGCATCTATCTATCATCTTCACCCAGAAGTCATGATTTATTTTCTGCAAAACAAG----ATTTCAACCATAAATGAGTTCTGTTAATTCCAGTTTCCTGTATAGATTTGAGAAAGGTGAAATAACTAT-TAAACATTTATGTTTCTTT-AAAAAAAACCTTTAACAACTCGAAGATTTATTAAAAGAAAATTAGAGAAGATTAAAAGGAAAATA--AAGTGTTTACTACAATTTTTGAAACCGCCTGGGTACTTATGCTTTAATAAATTAGACA-------CATTTAAATTACA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76325817 706 + 90941950 ttgtttttcc-tttgttaatGCTAGAGAAAGGGGGTGGCATAGTATTTGCTGACTACTGCCACTGGGAAGGGGTTGGAAAGGCTCTGTCAGTGCCAGGTAACTGAGCTATCCC--CTAAATAAACACTGAATtc----ctgctttc------------tgtctctttttcatttttgctcaCAGA-------------GCTCCCATGGGTTCCCCCTAGGCAGACTGGCTTCCACACCACTAGCAAGCAGCCTCCTTGTATTCACTGACAGGCATCT-GTTTATTCTCCATTTCATCCCTCAATTGGTCCTCACTAGCT-----TTAGCTTTTCCAGAAATTTA-GTAACTCTCTTG-TTTATTAG---TGTT---ACATCTCACCTTTT--------------------------TCTATTTGCTAttgctgattta---ttttttgt-acttctGTACTGTTATTTCAGTGGAGTCTTATAAGAGATGTGAGGCAAATGAAAGCATCTATCTATCATCTTGACCCAGAAGTCATGATTTATTTTCTGCAAAACAAG----ATTTCAACCATAAATGAGTTCTGTTAATTCCAGTTTCCTGTATAGATTTGAGAAAGGTGAAATAACTAT-TAaacatttatgtttcttt-aaaaaaaacctttaacaACTCGAagatttattaaaagaaaattagagaagattaaaaggaaaata--aagtgttTACTACAATTTTTGAAACCGCCTGGGTACTTATGCTTTAATAAATTAGACA-------CATTTAAATTACA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18594038 706 + 33263144 TTGTTTTTCC-TTTGTTAATGCTAGAGAAGGGGGGTGGCATAGTATTTGCTGACTACTGCCACTGGGAAGGGGTTGGAAAGGCTCTGTCAGTGCCAGGTAACTGAGCTATCCC--CTAAATAAACACTGAATTC----CTGCTTTC------------TGTCTCTTTTTTATTTTTGCTCACAGA-------------GCTCCCATGGGTTCCCCCTAGGCAGACTGGCTTCCACACCACTAGCAAGCAGCCTCCTTGTATTCACTGACAGGCATCT-GTTTATTCTCCATTTCATCCCTCAATTGGTCCTCATTAGCT-----TTAGCTTTTCCAGAAATTTA-GTAACTCTCTTG-TTTATTAG---TGTT---ACATCTCACCTttt--------------------------tctatttgctattgctgattta---ttttttgt-acttctgtactgttatttCAGTGGAGTCTTATAAGAGATGTGAGGCAAATGAAAGCATCTATCTATCATCTTGACCCAGAAGTCATGATTTATTTTCTGCAAAACAAG----ATTTCAACCATAAATGAGTTCTGTTAATTCCAGTTTCCTGTATAGATTTGAGAAAGGTGAAATAACTAT-TAAACATTTATGTTTCTTT-AAAAAAAACCTTTAACAACTCGAAGATTTATTAAAAGAAAATTAGAGAAGATTAAAAGGAAAATA--AAGTGTTTACTACAATTTTTGAAACCGCCTGGGTACTTATGCTTTAATAAATTAGACA-------CATTTAAATTACA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198292585 708 + 210400635 TTGTTTTTCC-ACTGTTAATGCTAAAGAAAGGAGGTGGCATAGTACTTGCCGATTACTGCCATT-GGAAGTGGTTGGAAAGGCTCTGGCAATGCCAGGTAACTGAGTTACCCC--CCTAATAAACACTGAATTCTT--CTCTTTTC------------TGTCTCTTTTTCATTTTTGCTCAGAGA-------------GCTCCCATGGGTTCCCCCTGGGCTGACTAGCTTCCACACCACCAGCAAGCAACCTCCTTGCATTCACTGACGGGCATCTGGCTTATTCCCCATTTCATCCATCAATTGGTCCTCATTTGCT-----TTAGCTTTTCCAGAAATTTA-AGAACTCTCCTA--CTAGTAT---TGCC---ACATTTCACCCTT---------------------------TCTATTTGCTACTGCTGATTTA---TTTTTTTTAACTTCTATATTGTTATTTTGGTGGAGTCTTGTAAGAGATGTGAGGCAAATAAAAGCATCTATCTATCATCTTGACCCAGAAGTCATGATTTATTTTCTGCAAAAGAAG----ATTTCAACCATAAATAAGTTCTA-TAATTCCAGTTTCCTATATAGATTTGACAAAGGTTAAATAACTAT-TAAACATTTATGTTTTTTTTAAAAAAAACCTTTAACGATTCTAAGATTTATTAAAAGCAAATTCGAGAAGATTAAAAGGAAAAGAA-AAGTGTTTACTACAATTTTTGAAGCTGCCTGTGTACCTATGCTTTAATAAATTAGACA-------CATTTAAATTACA i calJac3.chr1 C 0 C 0 s mm10.chr15 77141797 575 + 104043685 TTGTTTGTTT-ACCTTCTATACCAAAGACAGAGGGTGGC------CCTGCAGGC--------CGGGGAAGTGCTTGGAGAGGCCTGGGCAGTG-CAAGCAGCT-AGCCATCC-------ACACACACAGAACCTTTGGCTGCTTCC------------CACCTTCATTTTATGT---------------------------------GGTGCACTCT-----------------CCTCACTA--AGGCAGCTTCA-CAAGTCTGCTGCCAGGCTTTA-GCGCCTCCTCCTTTTCAGCCTATCTTTTTTTTTCTTCCATTCTGCATTAATTTTTCCAGAACTCTG-TTTAGCCCCT---GTTATCAGCTATGCC---ACGCCCCACATTCT--------------------------TC----------TGCTGATTTACACTTTTCCAT-ACATTTATATTACTA-----GTGGA---TCACAACAGATGAGAGGTAACAGA----------TGAGCATTCTAACCCAGAAGCCAAG-CTTGCGTTATTCAAGACAATCACCATTTTAAGCAAA--------CTTTCAAATCTAGACTCCTCTGTAAGTGAGAAAAAC------------------------TGGCTCCCT---------------------------------AAAAACAAATC---GGGGTTTCAAAGGAAAAGGAATGGTGTTTG-TATAATTCCTGAGACAGCCCTTTTACTTAAGCGTCAAGAAATCAGGCAAATgggccagggagatgcta i mm10.chr15 I 1 C 0 s canFam3.chr10 40917690 689 - 69331447 TTGTTTTTCCTTTTTTTGAGGGTGGAAAAAAGGGGCAGCACAATATGTGCTGGCCATTTCCATTGGGAAGGTATTGGAGA-----------TGCTGAACAGGTCAGTTCTCCTAATACAATATACACGGAGTCC----CTGTTTGC------------TGGTCC---TTTactcctgctctgagactagagtctagagactctctggggttccttctgggcacactagcttccataaccctagcag-------ccttgtcctcattgttagatgtta-gcttccactccatgt-atccatcagttggttcccacttgct-----ttaatttttccagaaatttgtgtaa--ctctta-tttgttag---tactatcactcttcacccttt--------------------------tctctttgttgttactggtttaattctttctgt-attttcatagtgtta-----gtggggtctcacaagagatgagaggCTGCGAAAA-----TATCCCACAACCTGACCCAGAAGGCATGATTTATTTTCTGCAA---AAG----ATTTCAACCACAATTAAG--CTGTAGCATTCAGGTTCCTTTTTAACTTTGCGAAAGG--ACATGGGTGCGTGAACTTCATTGTTTCTTT-AAAATAACCCTTTAAGAATACCAAGATTCACTAAAAGTAAACTAGAGAAGCTT-AAAGGAAAACAAAAAGTGTTCACTGCAATTCTTGA-ACAGCCCTTGTACTTATGCTTTGGTAAATTAGATG-------CATTTCGATTACA i canFam3.chr10 C 0 C 0 a score=249927.000000 s hg38.chr22_KI270876v1_alt 144824 79 + 263666 GGAAGCAAAGCAACTC-------AGAGAAG----G-ATCA----AAACTAA-ATATGTgg---ccggatgcagtggctcacgcctgtaatcccagcact s panTro4.chr22 34522257 80 + 49737984 GGAAGCAAAGCAACTC-------AGAGAAG----GAATCA----AAACTAA-ATATGTgg---ccggatgcagtggctcacgcctgtaatcccagcact i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30938778 79 + 46535552 GGAAGCAAAGCAACTC-------AGAGAAG----G-ATCA----AAACTAA-ATATGTgg---ccggatgcagtggctcacgcctgtaatcccagcact i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100489569 79 - 115148730 GGAAGCAAAGCAACTC-------AGAGAAG----G-ATCA----AAACTAA-ATATGTgg---ccggatgcagtggctcacgcctgtaatcccagcact i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80642941 79 + 95678458 GGAAGCAAAGCCACTC-------AGAGAAG----G-ATCA----AAACTAA-ATATGTgg---ccagacgcagtggctcacgcctataatcccagcact i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81069344 79 - 96509753 GGAAGCAAAGCCACTC-------AGAGAAG----G-ATCA----AAACTAA-ATATGTgg---ccagacgcagtggctcacgcctataatcccagcact i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76326523 79 + 90941950 GGAAGCAAAGCAACTC-------AGAGAAG----G-ATCA----AAACTAA-ATATGTGG---CCagacgtagtggctcacgcctgtaatcccagcact i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18594744 79 + 33263144 GGAAGCAAAGCAACTC-------AGAGAAG----G-ATCA----AAACTAA-ATATGTgg---ccagacgcagtggctcacgcctgtaatcccagcact i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198293293 79 + 210400635 AGAAACAAGGCAACTC-------AGAGAAG----A-ATCA----AAACTAA-ATATGTGg---ccaggcactgtggctcatatctgcaatcccagcact i calJac3.chr1 C 0 C 0 s mm10.chr15 77142372 98 + 104043685 gtggggaaaagcactcgctgcgtaaatgagttcag-atcagcttaaactgatccatgtaaactccagaccaagtgacgtgtgtctgtgacctcagcgct i mm10.chr15 C 0 I 282 e canFam3.chr10 40918379 0 - 69331447 C a score=339922.000000 s hg38.chr22_KI270876v1_alt 144903 134 + 263666 gtggaaggccgaggcgggtggatcatgaggtcaggagatcaagaccagcctggccaacatggtgaaaccccatctctactaaagatacaaaaaattagccaggtgtggtggcgcacacctgtaatcccagctac s panTro4.chr22 34522337 134 + 49737984 ttggaaggccgaggcgggtggatcatgaggtcaggagatcaagaccagcctggccaacatggtgaaaccccatctctactaaagatacaaaaaattagccaggtgtggtggcgcacacctgtaatcccagctac i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30938857 134 + 46535552 ttggaaggccgaggcgggtggatcacaaggtcaggagatcaagaccagtctggccaacatggtgaaaccccatctctactaaagatacaaaaaattagccaggtgtagtggcgcacatctgtaatcccagctac i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100489648 134 - 115148730 ttgggaggctgaggcgggtggatgacgaggtcaggagatcaagaccagcctggccaacatggtgaaaccccatctctactaaagatacaaaaaattagccaggtgtggtggcacacaccagtaatcccagctac i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80643020 134 + 95678458 ttgggaggccgaggcgggtggatcatgaggtcaggagatcaagaccagcctggccaacatggtgaaaccccatctctactaaagatacaaaaaattagccaggtgtggtggtgcgcacctgtaatctcagctac i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81069423 134 - 96509753 ttgggaggccgaggcgggtggatcatgaggtcaggagatcaagaccagcctggccaacatggtgaaaccccatctctactaaagatacaaaaaattagccaggtgtggtggtgcgcacctgtaatctcagctac i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76326602 134 + 90941950 ttgggaggccgaggcgggtggatcatgaggtcaggagatcaagaccagcctggccaacatggtgaaaccccatctctactaaagatacaaaaaattagccaggtgtggtggtgcgcacctgtaatctcagctac i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18594823 134 + 33263144 ttgggaggccgaggcgggtggatcatgaggtcaggagatcaagaccagcctggccaacatggtgaaaccccatctctactaaagatacaaaaaattagccaggtgtggtggcgcacacctgtaatctcagctac i chlSab2.chr19 C 0 C 0 e mm10.chr15 77142470 282 + 104043685 I e canFam3.chr10 40918379 0 - 69331447 C e calJac3.chr1 198293372 0 + 210400635 C a score=7716.000000 s hg38.chr22_KI270876v1_alt 145037 3 + 263666 tcg s panTro4.chr22 34522471 3 + 49737984 tcg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30938991 3 + 46535552 tct i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100489782 3 - 115148730 tcg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80643154 3 + 95678458 tcg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81069557 3 - 96509753 tcg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76326736 3 + 90941950 tcg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18594957 3 + 33263144 tcg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198293372 3 + 210400635 ttg i calJac3.chr1 C 0 C 0 e mm10.chr15 77142470 282 + 104043685 I e canFam3.chr10 40918379 0 - 69331447 C a score=280589.000000 s hg38.chr22_KI270876v1_alt 145040 128 + 263666 ggaggctgaggcaggagatt--cgcttcaactcaggagacggaggtcacagtgagccgagatcgcgctattgcactccagactgg--gagacaggatgagacggacgagactccatctc-aaaaaaaaaaaC--------------C s panTro4.chr22 34522474 128 + 49737984 ggaggctgaggcaggagattcacgcttcaactcaggagacggaggtcgcagtgagccgagatcgcgctattgcactccagactgg--gagacaggatgagacggacgagactccatctc---aaaaaaaaaC--------------C i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30938994 127 + 46535552 ggaggctgaggcaggagatt--cgcttcaactcaggagacggaggttgcagtgagccgagatcgtgctattgcactccagactgg--gcgacaggacgagacggacgagactccctctc--aaaaaaaaaaC--------------C i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100489785 127 - 115148730 ggaggctgaggcaggagatt--cgcttgaactcaggagacggaggttgcagtgagccgagatcgtgctattgcactccagactgg--gcgacaggatgagatggacaagactccatctc--aaaaaaaaaaC--------------C i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80643157 118 + 95678458 ggaggctgaggcaggagaat--cgcttgaacccaggaggcggaggttgcagtgagccgagatcacactattgcactcgagaatgg--gcaacaggatg---------agaccccatctc--aaaaaaaaaaa--------------C i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81069560 120 - 96509753 ggaggctgaggcaggagaat--cgcttgaacccaggaggcggaggttgcagtgagccgagatcacactattgcactccagaatgg--gcaacaggatg---------agaccccatctcaaaaaaaaaaaaa--------------C i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76326739 118 + 90941950 ggaggctgaggcaggagaat--cgcttgaacccaggaggcagaggttgcagtgagccgagatcacgctattgcactccagacggg--gcaacaggatg---------agaccccatctc--aaaaaaaaaaa--------------c i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18594960 118 + 33263144 ggaggctgaggcaggagaat--cgcttgaacccaggaggcggaggttgcagtgagccgagatcacgctattgcactccagactgg--gcaacaagatg---------agaccccacctc--aaaaaaaaaaa--------------C i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198293375 132 + 210400635 ggaggctgaggcaggggaat--cgcttgaactagggaggcagaggttgcagtgagccgagatcgtgctactgcactccagcctga--gcgacaaggca---------agactccatctc--aaaaaaaaaaaaaagaaaagaaaaga i calJac3.chr1 C 0 C 0 s canFam3.chr10 40918379 30 - 69331447 ----------------------------------GGAAGCAGAG--------------------------------CAAGTCTGGAAGTATCAGAA--------------------------------------------------- i canFam3.chr10 C 0 C 0 e mm10.chr15 77142470 282 + 104043685 I a score=2177375.000000 s hg38.chr22_KI270876v1_alt 145168 623 + 263666 CTAAATATGTGC-TGTAAGTCACAGTCCTAATGCCATCTACAAACACACCCAGCACTATATGCTAAACATTATTTTAAA-TCCTTACAAACAGAAAAGATTTGCAAGGGTCTAACTACTCTCAGAAA------CAAAAG--A----AAACATCAAGTATTTACCAGTTAGAATGCCTAATTTTTCATCTCCCTCCTTCTTCATGAATGCAATAG--TAGCCAAGATCAGAATGCAGTCTAAAGAGGAAAATAATTCCCGTTACCCCACTGATCTCTAGCAAATGGATCAATAAGGCAGGCCATGGACTCTGATCCTTCAATCA-----GGAATGGCAATGAAATGTAAACCAGTGATTACAACATTGAATCCTTTATCACAATGAG----GCCAGCCTGGAGAAGAAATGGGAGTCCTATGTTAGAAGTAGTCATCAGAAATGCTATTATAAACAGACTGTTATTACTGAACAGGAAAACCTATC-------------------TCAACTTAAGAAAGGTGGCCTGCGGA--AGACAGAACTA-----------------------------------------------------------GGGATACCTGAAACCAGCTAACAAAAGAACCAAAAACAAGCCATCCATATTTTAATAGTTGTTTAGTAATGAAAATGTTTGTAGTTTTCACTCCACATTTCCTGTGAAAGTCAAGTC-AATGCTAAA-------- s panTro4.chr22 34522602 623 + 49737984 CTAAATATGTGC-TGTAAGTCACAGTCCTAATGCCATCTACAAACACACTCAGCACTATATGCTAAACATTATTTTAAA-TCCTTACAAACAGAAAAGATTTGCAAGGGTCTAACTACTCTCAGAAA------CAAAAG--A----AAACATCAAGTATTTACCAGTTAGAATGCCTAATTTTTCATCTCCCTCCTTCTTCATGAATGCAATAG--TAGCCAAGATCAGAATGCAGTCTAAAGAGGAAAATAATTCCTGTTACCCCACTGATCTCTAGCAAATGGATCAATAAGGCAGGCCATGGACTCTGATCCTTCAGTCA-----GGAATGGCAATGAAATGTAAACCAGTGATTGCAACATTGAATCCTTTATCACAATGAG----GCCAGCCTGGAGAAGAAATGGGAGTCCTATGTTAGAAGTAGTCATCAGAAATGCTATTATAAACAGACTGTTATTACTGAACAGGAAAACCTATC-------------------TCAACTTAAGAAAGGTGGCCTGCGGA--AGACAGAACTA-----------------------------------------------------------GGGATACCTGAAACCAGCTAAGAAAAGAACCAAAAACAAGCCATCCATACTTTAATAGTTGTTTAGTAATGAAAATGTTTGTAGTTTTCACTCCACATTTCCTGTGAAAGTCAAGTC-AATGCTAAA-------- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30939121 615 + 46535552 CTAAATATGTGC-TGTAAGTCACAGTCCTAATGCCATCTATAAATACACCCAGCACTATATGCTAAACATTATTTTAAA-TCCTTACAAACAGAAAAGATTTGCAAGGGTCTAACTA---TCAGAAA------CAAAAG--A----AAACATCAAGTATTTACCAGTTAGAATGCCTAATTTTTCATCTCCCTCCTTCTTCATGAATGCAATAG--TAGCCAAGATCAGAATGCAGTCTAAAGAGGAAAATAATTCCCGTTACCCCACTGATCTCTAGTAAATGGATCAATAAGGCAGGCCATGGACTCTGATCCTTCAGTCA-----GGAATGGCAATGAAATGTAAACCAGTGATTGCAACATTGAATCCTTTATCACAATGAG----GCCAGCCTGGAGAAGAAACGGGAGTCCTATGTTAGAAGTAGTCATCAAAAATGCTATTATAAACAGACTGTTATTACTGAACAGGAAAACCTATC-------------------TCAACTTAAGAAAGGTGGCCTGCGGA--AGACAGAACTA-----------------------------------------------------------GGGATACCTGAAACCAACTAATAAAAGAACCAAAAAGAAGCCATCCATACTTT-----TTGTTTAGTAATGAAAATGTTTGTAGTTTTCACTCCACATTTCCTGTGAAAGTCAAGTC-AATGCTAAA-------- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100489912 621 - 115148730 CTAAATATGTGC-TGTAAGTCACAGTCCTAATGCCATCTACAAACACACCCAGCACTATATGCTAAACATTATTTTAAA-TCCTTACAAACAGAAAAGATTTGCAATGGTCTAACTACTCTCAGAAA------CAAAAG--A----AAACATCAAGTATTTACCAGTTAGAATGCCTAATTTTTCACGTCCCTCCTTCTTCATGAATGCAATAG--TAGCCAAGATCAGAATGCAGTCTAAAGAGGAAAATAATTCCCGTTACCCCACTGATCTCTAGCAAATGGATCAATAAGGCATGCCATGGACTCTGATCCTTCAGTCA-----GGAATGGCAATGAAATGTAAACCAGTGATTGCAACACTGAATCCTTTATCACAATGAG----GCCAGCCTAGAGAAGAAAGGGGAATCCTATATTAGAAGTAGTCACCAAAAATGATATTATAAACAGACTGTTATTACTGAACAGGAAAACCTATC-------------------TCAACTTAAGAAAGGTGGCCTGCGGA--AGACAGAACTA-----------------------------------------------------------GGGATACCCGAAACCAGCTAACAGAAGAACCAAAAAGAAGCCATCCATACTTTAATAGTTGTTTAGTAATGAAAATGTTTGTAGTTTTCACTCCACATTTCCTGTGAAAGTCAAGTC-AATGCTA---------- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80643275 623 + 95678458 CTAAATATGTGC-TGTAAGTCACAGTCCTAATGCCATCTACAAATACACCCAGCATTATGTGCTAAACATTATTTGAAA-TCCTTACAAACAGAAAAGATTTGCAAGGGTCTAACTACTCTCAGAAA------CAAAAG--A----AAAAATCAAGTAGTTACCAGTTAGAATGCCTAATTTTTCATCTCCCTCCTTCTTCATGAAAGGAATAG--TGGCCCAGATCAGAATGCAGTCTAAAGAGGAAAACAATTCCCGTTACCGCATTGATCTCTAGCAAATGGATCAATAAGGCATGCCATGGACTCTGATCCTTCAGTCA-----GGAATGGCAATGAAATGTAAACCAGTGATTGCAACATTGAATCCTTCATCACAATGAG----GCCAGCCTAGAGAAGAAACTGGAGTCCTATGTTAGAAGTAGTCATCAAAAATGCTATTATAAACAGACTGTTACTACTGAACAGGAAAACCTATC-------------------TCATCTTAAGAAAGGTGGCCTGCGGA--AGACAGAACTA---------------------------------------------------------GGGGGATACCTGAAACC-GCTAATAAAAGAACCAAAAAGAAGCCATCCATAC-TTAATAGTTGTTTGGTAATGAAAATGTTTGTAGTTTTCACTCCACATTTCCTGTGAAAGTCAAGTC-AATGCTAAA-------- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81069680 623 - 96509753 CTAAATATGTGC-TGTAAGTCACAGTCCTAATGCCATCTACAAATACACCCAGCATTATGTGCTAAACATTATTTGAAA-TCCTTACAAACAGAAAAGATTTGCAAGGGTCTAACTACTCTCAGAAA------CAAAAG--A----AAAAATCAAGTAGTTACCAGTTAGAATGCCTAATTTTTCATCTCCCTCCTTCTTCATGAAAGGAATAG--TGGCCCAGATCAGAATGCAGTCTAAAGAGGAAAACAATTCCCGTTACCGCATTGATCTCTAGCAAATGGATCAATAAGGCATGCCATGGACTCTGATCCTTCAGTCA-----GGAATGGCAATGAAATGTAAACCAGTGATTGCAACATTGAATCCTTCATCACAATGAG----GCCAGCCTAGAGAAGAAACTGGAGTCCTATGTTAGAAGTAGTTATCAAAAATGCTATTATAAACAGACTGTTACTACTGAACAGGAAAACCTATC-------------------TCATCTTAAGAAAGGTGGCCTGCGGA--AGACAGAACTA---------------------------------------------------------GGGGGATACCTGAAACC-GCTAATAAAAGAACCAAAAAGAAGCCATCCATAC-TTAATAGTTGTTTGGTAATGAAAATGTTTGTAGTTTTCACTCCACATTTCCTGTGAAAGTCAAGTC-AATGCTAAA-------- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76326857 622 + 90941950 ctaaatatgtGC-TGTAAGTCACAGTCCTAATGCCATCTACAAATACACCCAGCATTATGTGCTAAACATTATTTGAAA-TCCTTACAAACAGAAAAGATTTACAAGGGTCTAACTActctcagaaa------caaaag--a----aaaaatcaagtaGTTACCAGTTAGAATGCCTAATTTTTCATCTCCCTCCTTCTTCATGAAAGGAATAG--TGGCCCAGATCAGAATGCAGTCTAAAGAGGAAAACAATTCCCGTTACCACATTGATCTCTAGCAAATGGATCAATAAGGCATGCCATGGACTCTGATCCTTCAGTCA-----GGAATGGCAATGAAATGTAAACCAGTGATTGCAACATTGAATCCTTCATCACAATGAG----GCCAGCCTAGAGAAGAAACTGGAGTCCTATGTTAGAAGTAGTCATCAAAAATGCTCTTATAAACAGACTGTTACTACTGAACAGGAAAACCTACC-------------------TCATCCTAAGAAAGGTGGTCTGCGGA--AGACAGAACTA----------------------------------------------------------GGGGATACCTGAAACC-GCTAataaaagaaccaaaaagaagccATCCATAC-TTAATAGTTGTttggtaatgaaaatgtttgtaGTTTTCACTCCACATTTCCTGTGAAAGTCAAGTC-AATGCTAAA-------- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18595078 622 + 33263144 CTAAATATGTGC-TATAAGTCACAGTCCTAATGCCATCTACAAATACACCCAGCATTATGTGCTAAACATTATTTGAAA-TCCTTACAAACAGAAAAGATTTGCAAGGGTCTAACTACTCTCAGAAA------CAAAAG--A----AAAAATCAAGTAGTTACCAGTCAGAATGCCTAATTTTTCATCTCCCTCCTTCTTCATGAAAGGAATAG--TGGCCCAGATCAGAATGCAGTCTAAAGAGGAAAACAATTCCCGTTACCGCATTGATCTCTAGCAAATGGATCAATAAGGCATGCCATGGACTCTGATCCTTCAGTCA-----GGAATGGCAATGAAATGTAAACCAGTGATTGCAACATTGAAT-ATTCATCACAATGAG----GCCAGCCTAGAGAAGAAACTGGAGTCCTATGTTAGAAGTAGTCATCAAAAATGCTATTATAAACAGACTGTTACTACTGAACAGGAAAACCTATC-------------------TCATCTTAAGAAAGGTGGCCTGCGGA--AGACAGAACTA---------------------------------------------------------GGGGGATACCTGAAACC-GCTAATAAAAGAACCAAAAAGAAGCCATCCATAC-TTAATAGTTGTTTGGTAATGAAAATGTTTGTAGTTTTCACTCCATATTTCCTGTGAAAGTCAAGTG-AATGCTAAA-------- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198293507 610 + 210400635 aaaaGTATGTGC-TCTAAGT--CAGTCCTAGTGCCAT----------ACCCAGCACTATGTGCTAAACATTATTCTAAA-TCCCTATAAACAGAAAAGATTTGCAAGGGTCTAACTATTCTCAGAAA------CAAAAGGAA----AAAAATCAGGTATTTACCAGTTAGAATGCCTAATTTTCCACCTCCCTCCTTCTTCATGAATGCAATGT--TGGTCAAGATCAGAATGTGTTCTAAAGTAGAAAATAATTCTCGTTACCCCACTGATCTCTAGCAAATGGATCAATAAGGCATGCCATGGACTCTGATCATTCAGTCA-----GGAATGGCAATGAAATGTAAACCAGTGATTGCAACACTGAATCCTTCATCACAATGAG----GCAAGCCTAGAGAAGAAACTGGAGTCCTATGTTAGAAGAAGTCATCAAAAATGCTATTATAA--AGACTATTAGTACTGAACAGGGAAACCTATC-------------------TCAACTTAAGAAAGGTGGCCT-CAGA--AGACAGAAATA-----------------------------------------------------------GGGATGCCTGAAACCAGCTATTAAAAGGACCAAAAAGAAGCCATCTATACTTTAATAGTCGTTTAGTAATGAAAATGTTCATAGTTTTCACTCCACATTTCCTATGAAAGTGAAGTC-AATGCTAAA-------- i calJac3.chr1 C 0 C 0 s mm10.chr15 77142752 514 + 104043685 TCAAGTGCATGCTTGTGCTTTGCAGTCCGAATGTC---------------CCACGTAATGCACTAGCAGTTACTCTAAACTTGTGACAGACATGAAAGATTTGCAAGTATCTAAGCACTCTCAGGAA-------ACAAG--A----GAAATTCAAGTATTTACCGATTAGAAAG----------------TTTCCTCCTTAATGAACGCAATAG--TGGCCTAGACAAGAATTGAGTCCAAAGAGGAAAATTATTTCTGTTGCCTCATTGA--TCTAACAAATGGATCAATAAGGCATGCCATGGACTCTGATCCTTCAGTCA-----GGAACAGCCAGGAAATACAAACCAGTGATTG-AAGATTTAATCCTTGTTCACAA--------GACATATCAGAGAAGAAAC--------------------------------------CACCAGCAGGCCGCTTCCCCTGATCAGGGCAGCCTGTG-------------------TCCA---AGGAAAGGAAGAC-GTGGACCAGAAAGAA--------------------------------------------------------------GGTACA-CTGGAACC-----------------------AGCCATGGAT---TCAATG--CATCTAAGATGTACAACACACCCAGATTTTTCTCTATATTATCTGTGACAATCAAATC-AATGCTCAA-------- i mm10.chr15 I 282 I 1396 s canFam3.chr10 40918409 695 - 69331447 CTAAACGTGTAC-CGTAAGTCCTAGTTCGATCGTCACCTACAAGTTCACTCAGCACTATA--------------CTAAA-TCCTGACAAATACAAAACACTTTCAGGGGTCTAATCACTCTCAGAAAACAAGGCAAAAC--AAAACAAAAATCAAGTATTTACCGATTAGAATGCCTAACTCTTCACCTCCCACCTCCTTCACAAAATTCAGGATCTGGCCCAGATCACATC----------------AGCATTTCCCGGCACCCTAATGATCTCTACCAAATGGATCAATAAGGCATGCCACAGACTCTGACCCCTCAGTCAGGAATGGAATGGCAGAGAAATATAAACTAGTGGCTGCAACATTTAGTCCTTTATCACCGTGAGACAAACAAACCTAGAGAAGAAATTAGAG-CCTGTGTCAGAAAAGTTCATCCAAAAAGC---GATAAGTAAGCTGTTACACTAAAACAGGAAAACCCGTCCCCAAGTAAGAGAGAATATTCAATTTAAGAAAGAAAGCATGTaaa--aaaaaaaaaaaaaaaaaaagaaaagaaaagaaaaggaaagaaagaaagaaaGCATGTAGAAAACACAGGATGGAGATCCAAAATCAGTTCCTAAGAGCAGCAAAAGGAAGCTGACTAAACTTCAATAGTTGCTTAGTAAC-AAAACACTTCCAGATTTCACTCTACACTTCTT-TCCACGTCAAACCAAATGCTCCAAAACAGAA i canFam3.chr10 C 0 C 0 a score=414842.000000 s hg38.chr22_KI270876v1_alt 145791 144 + 263666 -------CCAACA----------GGGCATACTTTAA---------AAAAGCATAAAAAGACATATCTATTTCTTCTCTTTACTTATAGTCTTCCTCACTTGAAACTTCAT-----------TATTATCATTATCAATTAAATCAACTACACTATCCAGCTTCATTCAAGAATAATTTTCTA s panTro4.chr22 34523225 144 + 49737984 -------CCAACA----------GGGCATACTTTAA---------AAAAGAATAAAAAGACATATCTATTTCTTCTCTTTACTTATAGTCTTCCTCACTTGAAACTTCAT-----------TATTATCATTATCAATTAAATCAACTACACTATCCAGCTTCATTCAAGAATAATTTTCTA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30939736 144 + 46535552 -------CAAACA----------GGGCATACTTTAA---------AAAAGAATAAAAAGACATATCTATTTCTTCTCTTTACTTATTATCTTCCTCACTTGAAACTTCAT-----------TATTATCATTATCAATTAAATCAACTACACTATACAGCTTCATTCAAGAATATCTTTCTA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100490533 134 - 115148730 ---------AACA----------GGGCATACTTTAA---------AAAAGAATAAAAAGACATATCTATTTCTTCT-----CTTATCATCTTCCTCACTTGAAATTTC--------------GTTATCATTATTAATTAAATCAACTACAATATCCAGCTTCATTCAAGAATAATTTTCTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80643898 141 + 95678458 -------CAAACA----------GGGCATACTTTAA---------AAAATAATAAAAGGACCTATCTATTTCTTTTCTTTACTTATAATCTTCCTCACTTGAAACTTC--------------ATTATCATTATCAATTAAATCAACTACACTATCCAGCTTCATTCAAGAATAATTTTCTA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81070303 141 - 96509753 -------CAAACA----------GGGCATACTTTAA---------AAAATAATAAAAGGACCTATCTATTTCTTTTCTTTACTTATAATCTTCCTCACTTGAAACTTC--------------ATTATCATTATCAATTAAATCAACTACACCATCCAGCTTCATTCAAGAATAATTTTCTA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76327479 141 + 90941950 -------CAAACA----------gggcatactttaa---------aaaataataaaaggacatatctatttcttttctttacttataGTCTTCCTCACTTGaaacttc--------------attattattatcaattaAATCAACTACACTATCCAGCTTCATTCAAGAATAATTTtcta i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18595700 141 + 33263144 -------CAAACA----------GGGCATACTTTAA---------AAAATAATAAAAGGATATATCTCTTTCTTTTCTTTACTTACAATCTTCCTCACTTGAAACTTC--------------ATTATCATTATCAATTAAATCAACTACACTATCCAGCTTCATTCAAGAATAATTTTCTA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198294117 157 + 210400635 -------CAAACAAATAATCTTCAAGCATACTTAAA---------AAAACAAT-AATGGGCATATCTATCTCCT-------CTCATAATCTTCCTCACCTGAAACTTCATTATTTTTATTATTTTATCATTATCAATTAAATCAACTACACTATCCAGCTTCATTCAAGAATAATTTTCCA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40919104 158 - 69331447 ACAACAACAAAAA-----TCTTCAAGCATCTTTAAAAAACAAAACAAAAAAATCAAAGGGCATATCTATTTCTTCTTCCGATTTACAATCTTCCTTATCTATAACTAT--------------GATATCATTATC----CGATCAACTGGACTACTCAGCCTAATTCAGGAATAATTTTTCA i canFam3.chr10 C 0 I 771 e mm10.chr15 77143266 1396 + 104043685 I a score=175339.000000 s hg38.chr22_KI270876v1_alt 145935 65 + 263666 ggcctggcacggtggctcccacctgtaatcccagcactttgggaggccga-ggcgggtggatcaca s panTro4.chr22 34523369 65 + 49737984 ggcccggcacggtggctcccacctgtaatcccagcactttgggaggccga-ggtgggtggatcaca i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30939880 65 + 46535552 ggccaggcacggtggctcccacctgtaatcccagcactttggaaggccga-ggcgggtggattaca i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100490667 65 - 115148730 ggccaggcacggtggctcccacctgtaatcccaacactttgggaggatga-ggcgggtggatcacc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80644039 65 + 95678458 ggccgggcgtgatggcttccgtttgtaatcccagcactttgggaggctga-ggtgggtggatcaca i rheMac3.chr10 C 0 I 2 s macFas5.chr10 81070444 65 - 96509753 ggccgggcgtgatggcttccgtttgtaatcccagcactttgggaggctga-ggtgggtggatcaca i macFas5.chr10 C 0 I 2 s papAnu2.chr10 76327620 65 + 90941950 ggccgggcgtgatggcttccgtttgtaatcccagcactttgggaggctga-ggtgggtggatcaca i papAnu2.chr10 C 0 I 2 s chlSab2.chr19 18595841 65 + 33263144 ggccgggcgtgatggcttccgtttgtaatcccagcactttgggaggctga-ggtgggtggatcaca i chlSab2.chr19 C 0 I 2 s calJac3.chr1 198294274 66 + 210400635 ggctggaggcagtggctcatgcctgtaatcccagcactttaaaagaccgagggcaggtggatcacc i calJac3.chr1 C 0 C 0 e mm10.chr15 77143266 1396 + 104043685 I e canFam3.chr10 40919262 771 - 69331447 I a score=272851.000000 s hg38.chr22_KI270876v1_alt 146000 122 + 263666 tgaggtcaggagttccagaccagcctggccaatatggcaaaaccccgtctctactaaaaatacaaaaattagctgggcatggtggcatgtgcctgtagtcccacttacttgggaggctgaga s panTro4.chr22 34523434 122 + 49737984 tgaggtcaggagttccagaccagcctggccaatatggcaaaaccccatctctactaaaaatacaaaaattagctgggcatggtggcatgtgcctgtagtcccacttacttgggaggctgaga i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30939945 122 + 46535552 tgaggtcagcagttccagaccagcctggccaatatggcaaaaccccgtctctactaaaaatacaaaaattagctgggcatggtggcatgtgcctgtcgtcccacctacttgggaggctgaaa i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80644106 122 + 95678458 aggggtcaggagatcgagaccagcttggccaatatagcaaaaccctgtctctactaaaaatacaaaaattagtcaggcatggtggcatgtgcccgtagtcccagctactccagaggctgagt i rheMac3.chr10 I 2 C 0 s macFas5.chr10 81070511 122 - 96509753 aggggtcaggagttcgagaccagcttggccaatatagcaaaaccctgtctctactaaaaatacaaaaattagtcaggcatggtggcatgtgcccgtagtcccacctactcaggaggctgaga i macFas5.chr10 I 2 C 0 s papAnu2.chr10 76327687 122 + 90941950 aggggtcaggagttcgagaccagcttggccagtatagcaaaaccctgtctctactaaaaacacaaaaattagtcaggcatggtggcatgtgcctgtagtcccacctactcaggaggctgaga i papAnu2.chr10 I 2 C 0 s chlSab2.chr19 18595908 122 + 33263144 aggggtcaggagttcgagaccagcttggccaatatagcaaaaccctgtctctactaaaaatacaaagattagtcaggcatggtggcatgtgcctgtagtcccacctactcgggaggctgaga i chlSab2.chr19 I 2 C 0 s calJac3.chr1 198294340 122 + 210400635 tgaggttaggagtttgagaccagcctgaccaatgtggtgaaaccccgcctctactaaaaatacaaaaattagccctgcatggtggcatgtgtctgcagtcccagctactcaggaggctgaga i calJac3.chr1 C 0 C 0 e mm10.chr15 77143266 1396 + 104043685 I e canFam3.chr10 40919262 771 - 69331447 I e nomLeu3.chr7b 100490732 0 - 115148730 C a score=50088.000000 s hg38.chr22_KI270876v1_alt 146122 44 + 263666 cagtagaattgcttgaacccaggaggcggaggttgcagtgagcc s panTro4.chr22 34523556 44 + 49737984 cagtagaattgcttgaacccaggaggtggaggttgcagtgagcc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30940067 44 + 46535552 cagtagaattgcttgaacccaggaggtggaggttgcagtgagcc i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80644228 44 + 95678458 caggagaatcgcttgaacctgggaggcagaggttgcagtgagcc i rheMac3.chr10 C 0 I 40 s chlSab2.chr19 18596030 44 + 33263144 taggacaatcacttgaacctgggaggcggaggttgcagtgagcc i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198294462 44 + 210400635 caggagagctgtttgaacccaggagatagaggttgcaatgagct i calJac3.chr1 C 0 C 0 e mm10.chr15 77143266 1396 + 104043685 I e canFam3.chr10 40919262 771 - 69331447 I e papAnu2.chr10 76327809 0 + 90941950 C e macFas5.chr10 81070633 0 - 96509753 C e nomLeu3.chr7b 100490732 0 - 115148730 C a score=19666.000000 s hg38.chr22_KI270876v1_alt 146166 29 + 263666 atgatggcgccactgtactccagcctggg s panTro4.chr22 34523600 29 + 49737984 atgatggcgccactgtactccagcctggg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30940111 29 + 46535552 atgatcgcgccactgtactccagcctggg i ponAbe2.chr22 C 0 C 0 s chlSab2.chr19 18596074 29 + 33263144 acgatctcaccattgcactccagcctggg i chlSab2.chr19 C 0 I 22 s calJac3.chr1 198294506 29 + 210400635 gggatcaggccactgcaatccagtctggg i calJac3.chr1 C 0 I 611 e mm10.chr15 77143266 1396 + 104043685 I e canFam3.chr10 40919262 771 - 69331447 I e rheMac3.chr10 80644272 40 + 95678458 I e papAnu2.chr10 76327809 0 + 90941950 C e macFas5.chr10 81070633 0 - 96509753 C e nomLeu3.chr7b 100490732 0 - 115148730 C a score=573.000000 s hg38.chr22_KI270876v1_alt 146195 2 + 263666 AG s panTro4.chr22 34523629 2 + 49737984 AG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30940140 2 + 46535552 AG i ponAbe2.chr22 C 0 C 0 e mm10.chr15 77143266 1396 + 104043685 I e canFam3.chr10 40919262 771 - 69331447 I e calJac3.chr1 198294535 611 + 210400635 I e rheMac3.chr10 80644272 40 + 95678458 I e papAnu2.chr10 76327809 0 + 90941950 C e macFas5.chr10 81070633 0 - 96509753 C e chlSab2.chr19 18596103 22 + 33263144 I e nomLeu3.chr7b 100490732 0 - 115148730 C a score=4041.000000 s hg38.chr22_KI270876v1_alt 146197 9 + 263666 TGCAGTTAA s panTro4.chr22 34523631 9 + 49737984 TGCAGTTAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30940142 9 + 46535552 TGCAGTTAA i ponAbe2.chr22 C 0 C 0 s calJac3.chr1 198295146 9 + 210400635 TGCTATTAA i calJac3.chr1 I 611 C 0 e mm10.chr15 77143266 1396 + 104043685 I e canFam3.chr10 40919262 771 - 69331447 I e rheMac3.chr10 80644272 40 + 95678458 I e papAnu2.chr10 76327809 0 + 90941950 C e macFas5.chr10 81070633 0 - 96509753 C e chlSab2.chr19 18596103 22 + 33263144 I e nomLeu3.chr7b 100490732 0 - 115148730 C a score=293859.000000 s hg38.chr22_KI270876v1_alt 146206 489 + 263666 TAAGATAAAATTTTGGGAAGCCAA---AATGCATCAGATAGTCAAATTAATCAATTCTGTGCTTACCCCAGAGGAACCAAAGGCTCCAAGACAATTAGTAGACATTTCTCAAGGGTTTGGCCAAAGGTGGGTTACAGAGACTTGGTGGGGGAAGGCAGAGTTTATGTAAAGAAAAAGTTAA----------------------------------CTAAATGTC-----TTCAGGCCTTCAAATAAATTT--TGACTAAGTG----------aa------aaaaaaaaaaaaagaaaaaGTTTAATAG-----TAAGGTCTGTATTCTTTATATTATACTTAATGTAATACCTGTCATCAAAATGggggcagggcc-----agaaatagcataa-actttaga--aagataaacatgggttaaaatttaggctctgcaatgaatgtactatttgtgtgaccttagatgagtaacttaagctctcaaggccttcggtttttcatctgcaaaatgaaaataaggatcattacctaaaagggtacctacaagaattaactaagat s panTro4.chr22 34523640 493 + 49737984 TAAGATAAAATTTTGGGAAGCCAA---AGTGCATCAAATAGTCAAATTAATCAATTCTGTGCTTACCCCAGAGGAACCAAAGGCTCCAAGACAATTAGTAGACATTTCTCAAGGGTTTGGCCAAAGGTGGGTTAC--AGATTTGGTGGGGGAAGGCAGAGTTTATGTAAAGAAAAAGTTAA----------------------------------CTAAATGTC-----TTCAGGCCTTCAAATAAATTT--TGACTAAGTGGaaaaaaaaaaa------aaaaagaaaaaaagaaaaaGTTTAAT---------AGGTCTGTATTCTTTATATTATACTTAATGTAATACCTGTCATCAAAATGggggcagggcc-----agaaatagcataa-actttaga--aagataaacatgggttaaaatttaggctctgcaatgaatgtactatttgtgtgaccttagatgagtaacttaacctctcaaggccttcggtttttcatctgcaaaatgaaaataaggatcattacctaaaagggtacctacaagaattaactaagat i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30940151 496 + 46535552 TAAGACAAAATTTTGGGAAGCCAA---AGTGCATCAAATAGTCAAATTAATCAATTCTGTGCTTACCCCAGAGGAACCTAAGGCTCCAAGACAATTAGTAGACATTTCTCAAGGGTTTGGCCAAAGGTGGGTTACAGAGATTTGGTGGGGGAAGGTAGAGTTTATGTAAAGAAAAAGTTAA----------------------------------CTAAATGTT-----TTCAGGCCTTCAAATAAATTT--TGACTAAGTG---aaaaaaaaa------aaaaaaaaagaaagaaaaaGTTAAATAG-----TAAGGTCTGTATTCTTTATATTATACTTAATATAATACCTGTCATCAAAATGggggcagggcc-----agaaatagcataa-actttaga--aagataaacatgggttaaaatttaggctctgcaatgaatgtactatttgtgtgaccttggatgagtaacttaacctctcaaggccttcagtttttcatctgcaaaatgaaaataaggatcattacctaaaagggtacctacaagaatttactaagat i ponAbe2.chr22 C 0 C 0 s calJac3.chr1 198295155 487 + 210400635 TAAGACAAAATTTCAGGAAGCCAA---AGCGTATCAAATAGCCAAATT----AATTCTGTACTTACCCTAGAGGAACCTAAGACTCCAAGACAATTAGTAGACATTTCTCAAGGGTTTGGCCAAAGGTGGGTTACAGAGATTTGGTGGGGGAAGGTAAGGTTTACGTAAATAAAAAGTTAA----------------------------------CTGAATGTG-----TTCAGGATTTGAAATAAATTT--TGACtaatta-------aaaaa------aaaaaaaaaaaCAGAAAAAGTTATATAG-----TAAAGTCTGTATTCTTTATATTATACTTAATGTAATACCTGTCATCAAAATGGGGGCGGGAAC-----Agaaatagcataa-attttaga--aagacatacatgggttaaaatttaggctctgcaatgaatgcactatttgtgtgaccttggataagccacataacatctcaaggcctccagttttccatctgcaaaatgaaaat-aggatcattacctaacagagtacctataagaattaactaagat i calJac3.chr1 C 0 C 0 s canFam3.chr10 40920033 538 - 69331447 TAAGATAAAATTTCAGGAAGCTAATGCTGTGTATAGAATTGTCAACTTGATCAATTCTGCACTT-TCCCATAGGAACCTAAAGCTCCAAGAAAGTCAGCAGACATTTCTCAGGGTTTGGGCTAACAGAGAGAGTTAGAGATTTT---------------TCTTATTTAAAGAAAAAGTTAGGggcccagttggtggaacataaactactcttgatctaggggttgtgaattcaagccccacactgggtgcagagattactta---aaaaaataaaatcttaagaagaaAAAAGAAAAAAGTTTAATAAATATTAAGGGCCTATATTCTTCGCATTATACTTACTGCAATGGTTATCATCAAAAAAGGGATATAAACAACATAAGAATAACATAACATCttggaataagataaacatgggttcaaacccaggcttgaccatata-----tagctgcgtgactttggagaagtcctttaatctctcaatgtcttaatacttttatttgtaaaacaagagagaaaatggctaccttatagggtatccataagaattaactgacat i canFam3.chr10 I 771 I 241 e mm10.chr15 77143266 1396 + 104043685 I e rheMac3.chr10 80644272 40 + 95678458 I e papAnu2.chr10 76327809 0 + 90941950 C e macFas5.chr10 81070633 0 - 96509753 C e chlSab2.chr19 18596103 22 + 33263144 I e nomLeu3.chr7b 100490732 0 - 115148730 C a score=93105.000000 s hg38.chr22_KI270876v1_alt 146695 189 + 263666 aggccgggtgcagtggctcacgcctgtaatcccagcactctgggaggccaaggcgggtggatcacctgaggtcagtagttcgagaccagcctaaccaacatggtgaaacctcgcctctactaataatacaaaaattagctgagcgtggtggcaggtgcccgtaatcccagctaccaaaggaggttgagg s panTro4.chr22 34524133 189 + 49737984 aggccgggtgcagtggctcacgcctgtaatcccagcactctgggaggccaaggcgggtggatcacctgaggtcagtagttcgagaccagcctaaccaacatggtgaaacctcgcctctactaataatacaaaaattagctgagcgtggtggcaggtgcctgtaatcccagctaccaaaggaggttgagg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30940647 188 + 46535552 Cggccgggtgcagtggctcacgcctgtaatcccagcactttgggaggccaaggcgggtggatcacctgaggtcagtagttcgaaaccagcctaaccaacatggtgaaacctcgtctctactaataatacaaaaattagctgagcgtggtggcaggtgcctgtaatcccagctact-aaggaggttgagg i ponAbe2.chr22 C 0 C 0 s calJac3.chr1 198295642 188 + 210400635 Tggccgggcacagtggctcacacctgtaatcctagtactttgggaggccgaggtggggagatcatctgaggtcaggagttcaagatcagcctatccaacatggtgaaaccctgtctctactaaaaatacaaaaattagttgaacatggtggcaggcacctgtaatcccagctact-agggaggctgagg i calJac3.chr1 C 0 C 0 e mm10.chr15 77143266 1396 + 104043685 I e canFam3.chr10 40920571 241 - 69331447 I e rheMac3.chr10 80644272 40 + 95678458 I e papAnu2.chr10 76327809 0 + 90941950 C e macFas5.chr10 81070633 0 - 96509753 C e chlSab2.chr19 18596103 22 + 33263144 I e nomLeu3.chr7b 100490732 0 - 115148730 C a score=45295.000000 s hg38.chr22_KI270876v1_alt 146884 54 + 263666 caggagaatcacttgaacccgggaggtggaggttgcagtgagccacgatctcac s panTro4.chr22 34524322 54 + 49737984 caggagaatcacttgaacccgggaggtggaggttgcagtgagccacgatctcac i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30940835 54 + 46535552 caggagaatcacttgaacctgggaagtggaggttgcagtgagccacgatctcac i ponAbe2.chr22 C 0 C 0 s macFas5.chr10 81070633 54 - 96509753 caggacaatcacttgaacctgggaggcagaggttgcagtgagccacgatctcac i macFas5.chr10 C 0 C 0 s calJac3.chr1 198295830 54 + 210400635 cagaagaaccacctgaacctgggaggcagaagttgcagtgagccaagatctcac i calJac3.chr1 C 0 C 0 e mm10.chr15 77143266 1396 + 104043685 I e canFam3.chr10 40920571 241 - 69331447 I e rheMac3.chr10 80644272 40 + 95678458 I e papAnu2.chr10 76327809 0 + 90941950 C e chlSab2.chr19 18596103 22 + 33263144 I e nomLeu3.chr7b 100490732 0 - 115148730 C a score=19510.000000 s hg38.chr22_KI270876v1_alt 146938 40 + 263666 cattgcactccagcctgggcaagacagtgagactccgctt s panTro4.chr22 34524376 40 + 49737984 cactgcactccagcctgggcaagagagtgagactccgctt i panTro4.chr22 C 0 C 0 s macFas5.chr10 81070687 40 - 96509753 cattgcactccagcctgggcaacagaatgagactccacct i macFas5.chr10 C 0 I 3 s calJac3.chr1 198295884 40 + 210400635 cattgcactccagcctgggcaacagagcgagactccgcct i calJac3.chr1 C 0 C 0 e mm10.chr15 77143266 1396 + 104043685 I e canFam3.chr10 40920571 241 - 69331447 I e ponAbe2.chr22 30940889 0 + 46535552 C e rheMac3.chr10 80644272 40 + 95678458 I e papAnu2.chr10 76327809 0 + 90941950 C e chlSab2.chr19 18596103 22 + 33263144 I e nomLeu3.chr7b 100490732 0 - 115148730 C a score=7155.000000 s hg38.chr22_KI270876v1_alt 146978 13 + 263666 c-aaaaaaaaaaaa s panTro4.chr22 34524416 14 + 49737984 caaaaaaaaaaaaa i panTro4.chr22 C 0 C 0 s rheMac3.chr10 80644312 13 + 95678458 -caaaaaaaaaaaa i rheMac3.chr10 I 40 C 0 s macFas5.chr10 81070730 13 - 96509753 -aaaaaaaaaaaaa i macFas5.chr10 I 3 C 0 s calJac3.chr1 198295924 10 + 210400635 ----aaaaaaaaaa i calJac3.chr1 C 0 C 0 e mm10.chr15 77143266 1396 + 104043685 I e canFam3.chr10 40920571 241 - 69331447 I e ponAbe2.chr22 30940889 0 + 46535552 C e papAnu2.chr10 76327809 0 + 90941950 C e chlSab2.chr19 18596103 22 + 33263144 I e nomLeu3.chr7b 100490732 0 - 115148730 C a score=58727.000000 s hg38.chr22_KI270876v1_alt 146991 53 + 263666 aaaaaaaaaaGGAATTAACTAAGATCATATATAAAAAATTCTTTGCTTTTGGC s panTro4.chr22 34524430 53 + 49737984 aaaaaaaaaaGGAATTAACTAAGATCATATATAAAAAATTCTTTGCTTTTGGC i panTro4.chr22 C 0 I 16 s rheMac3.chr10 80644325 53 + 95678458 aaaaaaaaaaagaaTTAACTAAGATCATATATAAAAAATTCTTTGCTTTTGGC i rheMac3.chr10 C 0 I 52 s macFas5.chr10 81070743 53 - 96509753 aaaaaaaaaaaGAATTAACTAAGATCATATATAAAAAATTCTTTGCTTTTGGC i macFas5.chr10 C 0 I 4 s chlSab2.chr19 18596125 53 + 33263144 aaaaaaaaaaagaaTTAACTAAGATCATATATAAAAAATTCTTTGCTTTTGGC i chlSab2.chr19 I 22 I 3 s calJac3.chr1 198295934 37 + 210400635 ----------------aaTTAAGATCATATAAAAAAATTTTTTTGCTTTTGGA i calJac3.chr1 C 0 C 0 e mm10.chr15 77143266 1396 + 104043685 I e canFam3.chr10 40920571 241 - 69331447 I e ponAbe2.chr22 30940889 0 + 46535552 C e papAnu2.chr10 76327809 0 + 90941950 C e nomLeu3.chr7b 100490732 0 - 115148730 C a score=2169.000000 s hg38.chr22_KI270876v1_alt 147044 7 + 263666 -AAAAAAA s panTro4.chr22 34524499 7 + 49737984 -aaaaaaa i panTro4.chr22 I 16 C 0 s macFas5.chr10 81070800 7 - 96509753 -aaaaaaa i macFas5.chr10 I 4 C 0 s calJac3.chr1 198295971 7 + 210400635 TAAAAAA- i calJac3.chr1 C 0 C 0 e mm10.chr15 77143266 1396 + 104043685 I e canFam3.chr10 40920571 241 - 69331447 I e ponAbe2.chr22 30940889 0 + 46535552 C e rheMac3.chr10 80644378 52 + 95678458 I e papAnu2.chr10 76327809 0 + 90941950 C e chlSab2.chr19 18596178 3 + 33263144 I e nomLeu3.chr7b 100490732 0 - 115148730 C a score=1911.000000 s hg38.chr22_KI270876v1_alt 147051 7 + 263666 AAAAAAA s panTro4.chr22 34524506 7 + 49737984 aaaaaaa i panTro4.chr22 C 0 C 0 s macFas5.chr10 81070807 7 - 96509753 aaaaaaa i macFas5.chr10 C 0 C 0 e mm10.chr15 77143266 1396 + 104043685 I e canFam3.chr10 40920571 241 - 69331447 I e calJac3.chr1 198295978 0 + 210400635 C e ponAbe2.chr22 30940889 0 + 46535552 C e rheMac3.chr10 80644378 52 + 95678458 I e papAnu2.chr10 76327809 0 + 90941950 C e chlSab2.chr19 18596178 3 + 33263144 I e nomLeu3.chr7b 100490732 0 - 115148730 C a score=5364.000000 s hg38.chr22_KI270876v1_alt 147058 63 + 263666 gccgggtgcagcggctcacgcctataatcccagcactttgggaagctgaggcagatggatcac s panTro4.chr22 34524513 63 + 49737984 gccgggtgcagtggctcacacctataagcccagcactttgggaagctgaggcgggtggatcac i panTro4.chr22 C 0 C 0 e mm10.chr15 77143266 1396 + 104043685 I e canFam3.chr10 40920571 241 - 69331447 I e calJac3.chr1 198295978 0 + 210400635 C e ponAbe2.chr22 30940889 0 + 46535552 C e rheMac3.chr10 80644378 52 + 95678458 I e papAnu2.chr10 76327809 0 + 90941950 C e macFas5.chr10 81070814 0 - 96509753 C e chlSab2.chr19 18596178 3 + 33263144 I e nomLeu3.chr7b 100490732 0 - 115148730 C a score=32271.000000 s hg38.chr22_KI270876v1_alt 147121 123 + 263666 tgaggtcaggagttcgagaccagcctgaccaacatggagaaacctcatctctagtaaaaatagaaaaaattagctgggcttggtggcgcatgtctgtaatctcagctactcgggaggctgaag s panTro4.chr22 34524576 123 + 49737984 tgaggtcaggagttcgagaccagcctgaccaacatggagaaacctcatctctagtaaaaatagaaaaaaatagctgggcgtggtggcgcatgtctgtaatctcagctactcgggaggctgaag i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100490732 123 - 115148730 tgaggtcaggagttcgagaccagcctgaccaacatggagaaaccccgtctctactaaaaatagaaaaaattagctgggcatggtggcgcatgcctgtaatcccagctacttgggaggctgagg i nomLeu3.chr7b C 0 C 0 e mm10.chr15 77143266 1396 + 104043685 I e canFam3.chr10 40920571 241 - 69331447 I e calJac3.chr1 198295978 0 + 210400635 C e ponAbe2.chr22 30940889 0 + 46535552 C e rheMac3.chr10 80644378 52 + 95678458 I e papAnu2.chr10 76327809 0 + 90941950 C e macFas5.chr10 81070814 0 - 96509753 C e chlSab2.chr19 18596178 3 + 33263144 I a score=45528.000000 s hg38.chr22_KI270876v1_alt 147244 97 + 263666 caggagaactgcttgaacctgggaggcggaggttgcagtgagccgagatcgcgccatcgcagtccagcctgggcaacaagagcgaaactccatctca s panTro4.chr22 34524699 96 + 49737984 caggagaactgcttgaacctgggaggcggaggttgcagtgagccgagatcgcgccatcgcagtccagcctgggcaacaagagcgaaactccatctc- i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100490855 97 - 115148730 caggagaactgcttgaacctgggaggcagaggttgcagtgagccgagatcgcgccatcgcactccagcctgggcgacaagagcgaaactccatctca i nomLeu3.chr7b C 0 C 0 s papAnu2.chr10 76327809 96 + 90941950 caggacaatcacttgaacctgggaggcggaggttgcagtgagccacgatctcaccattgcactccagcctgggcaac-agaatgagactccacctca i papAnu2.chr10 C 0 C 0 e mm10.chr15 77143266 1396 + 104043685 I e canFam3.chr10 40920571 241 - 69331447 I e calJac3.chr1 198295978 0 + 210400635 C e ponAbe2.chr22 30940889 0 + 46535552 C e rheMac3.chr10 80644378 52 + 95678458 I e macFas5.chr10 81070814 0 - 96509753 C e chlSab2.chr19 18596178 3 + 33263144 I a score=546.000000 s hg38.chr22_KI270876v1_alt 147341 1 + 263666 a s nomLeu3.chr7b 100490952 1 - 115148730 a i nomLeu3.chr7b C 0 C 0 s papAnu2.chr10 76327905 1 + 90941950 a i papAnu2.chr10 C 0 C 0 s mm10.chr15 77144662 1 + 104043685 A i mm10.chr15 I 1396 C 0 e canFam3.chr10 40920571 241 - 69331447 I e calJac3.chr1 198295978 0 + 210400635 C e ponAbe2.chr22 30940889 0 + 46535552 C e rheMac3.chr10 80644378 52 + 95678458 I e panTro4.chr22 34524795 0 + 49737984 C e macFas5.chr10 81070814 0 - 96509753 C e chlSab2.chr19 18596178 3 + 33263144 I a score=9175.000000 s hg38.chr22_KI270876v1_alt 147342 10 + 263666 aaaaaaaaaa s panTro4.chr22 34524795 7 + 49737984 ---aaaaaaa i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100490953 10 - 115148730 aaaaaaaaaa i nomLeu3.chr7b C 0 C 0 s papAnu2.chr10 76327906 10 + 90941950 aaaaaaaaaa i papAnu2.chr10 C 0 I 56 s mm10.chr15 77144663 10 + 104043685 AAAAACAAAA i mm10.chr15 C 0 C 0 s canFam3.chr10 40920812 10 - 69331447 aaagaaacaa i canFam3.chr10 I 241 C 0 e calJac3.chr1 198295978 0 + 210400635 C e ponAbe2.chr22 30940889 0 + 46535552 C e rheMac3.chr10 80644378 52 + 95678458 I e macFas5.chr10 81070814 0 - 96509753 C e chlSab2.chr19 18596178 3 + 33263144 I a score=8989.000000 s hg38.chr22_KI270876v1_alt 147352 10 + 263666 aaaaaaaaaT s panTro4.chr22 34524802 10 + 49737984 aaaaaaaaaT i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100490963 10 - 115148730 aaaaatatat i nomLeu3.chr7b C 0 I 24 s papAnu2.chr10 76327972 10 + 90941950 aaaaaaaaaa i papAnu2.chr10 I 56 C 0 s chlSab2.chr19 18596181 10 + 33263144 AAAAAAAAAA i chlSab2.chr19 I 3 C 0 s mm10.chr15 77144673 10 + 104043685 CAAAACAGGC i mm10.chr15 C 0 C 0 s canFam3.chr10 40920822 10 - 69331447 acaaaaaaac i canFam3.chr10 C 0 C 0 e calJac3.chr1 198295978 0 + 210400635 C e ponAbe2.chr22 30940889 0 + 46535552 C e rheMac3.chr10 80644378 52 + 95678458 I e macFas5.chr10 81070814 0 - 96509753 C a score=3043.000000 s hg38.chr22_KI270876v1_alt 147362 3 + 263666 AGA s panTro4.chr22 34524812 3 + 49737984 AGA i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100490997 3 - 115148730 ATA i nomLeu3.chr7b I 24 C 0 s papAnu2.chr10 76327982 3 + 90941950 aaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18596191 3 + 33263144 AGA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198295978 3 + 210400635 AGA i calJac3.chr1 C 0 C 0 s mm10.chr15 77144683 3 + 104043685 AGC i mm10.chr15 C 0 I 3 s canFam3.chr10 40920832 3 - 69331447 aca i canFam3.chr10 C 0 C 0 e ponAbe2.chr22 30940889 0 + 46535552 C e rheMac3.chr10 80644378 52 + 95678458 I e macFas5.chr10 81070814 0 - 96509753 C a score=15282.000000 s hg38.chr22_KI270876v1_alt 147365 12 + 263666 ---------GATAATAATTAC s panTro4.chr22 34524815 12 + 49737984 ---------GATAATAATTAC i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100491000 12 - 115148730 ---------GATAATAATTAC i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81070814 12 - 96509753 ---------gataataaTTAC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76327985 12 + 90941950 ---------gataataattac i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18596194 12 + 33263144 ---------GATAATAATTAC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198295981 12 + 210400635 ---------CATAATAATTGC i calJac3.chr1 C 0 C 0 s mm10.chr15 77144689 9 + 104043685 ---------GTCAGTCGT--- i mm10.chr15 I 3 C 0 s canFam3.chr10 40920835 18 - 69331447 caTGGTATAGATCATAAC--- i canFam3.chr10 C 0 C 0 e ponAbe2.chr22 30940889 0 + 46535552 C e rheMac3.chr10 80644378 52 + 95678458 I a score=454262.000000 s hg38.chr22_KI270876v1_alt 147377 181 + 263666 CACTATTATTGTGA--AAGAATAAGAAAAAATAGAAAGCATACATAGTCCAAAATATAAATGCTAACAGCTGAGTTATAATCTTAAAGTTCTCCATG-TTC-TTTTTCATATGAACAGTCACATCAATACAAATATGAGGGGAA---AAATCACATTCTTCTT-CCTAAAGATTGCATATAAGAG-ATAG s panTro4.chr22 34524827 174 + 49737984 CACTATTATTGTGA--AAGAATAAGAAAAAATAGAAAGCATACATAGTCCAAAATATAAATGCTAACAGCTGAGTTA------TAAAGTTGTCCATG-TTG--TTCTCATATGAACAGTCACATCAATACAAATATGAGGGGAA---AAATCACATTCTTCTT-CCTAAAGATTGCATATAAGAG-ATAG i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100491012 181 - 115148730 CACTATTATTGTGA--AAGAATAAGAAAAAATAGAAAGCATACATAGTCCAAAATATAAATGCTAACAGCTGAGTTATAATCTTAAAGTTCTCCATG-TTC-TTTTTCATATGAACAGTCACATCAATACAAATATGAGGGGAA---AAATCACATTCTTCTT-CCTGAAGATTACATATAAGAG-ATAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80644430 174 + 95678458 CACTATTAATGTGA--AAGAATAAGAAAAAATAGGAAGCATACATAGTCCAAAATATAAATGCTAACAGCTGAGTTAT-------AAGTTCTCCATG-TTC-TTTTTCATATGAACAGTCACATCAATACAAATATGAGGGGAA---AAATCACGTTCTTCTT-ACTAAAGATTGCACAGAAGAG-ATAG i rheMac3.chr10 I 52 C 0 s macFas5.chr10 81070826 174 - 96509753 CACTATTAATGTGA--AAGAATAAGAAAAAATAGGAAGCATACATAGTCCAAAATATAAATGTTAACAGCTGAGTTAT-------AAGTTCTCCATG-TTC-TTTTTCATATGAACAGTCACATCAATACAAATATGAGGGGAA---AAATCACATTCTTCTT-ACTAAAGATTGCACAGAAGAG-ATAG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76327997 175 + 90941950 CACTATTAAtgtga--aagaataagaaaaaataggaagCATACATAGTCCAAAATATAAATGCTAACAGCTGAGTTAT-------AAGTTCTCCATG-TTC-TTTTTCACATGAACAGTCACATCAATACAAATATGAGGGGAA---AAATCACATTCTTCTTAACTAAAGATTGCACAGAAGAG-ATAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18596206 175 + 33263144 CACTATTAATGTGA--AAGAATAAGAAAAAATAGGAAGCATACATAGTCCAAAATATAAATGCTAACAGCTGAGTTAT-------AAGTTCTCCATGTTTT-TTTTTCATATGAACAGTCACATCAATACAAATATGAGGGGAA---AAATCACATTCTTCTT-ACTAAAGATTGCACAGAAGAG-ATAG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198295993 180 + 210400635 CACAATTACTGTAA--AAGAATAAGAAAATTGAGAAAGAATACACAGTCTAAAATTTAAATGCTAACAGCTGAGTTATAATCTTGAAATTCTCCATG-TTC-TTTTTCATATGCACAGTCACATCAATACAAATATGAGGGG-A---AAATCACATTCGTCTT-ACTAAAGATTTTATATAAAAC-CTAG i calJac3.chr1 C 0 C 0 s mm10.chr15 77144698 151 + 104043685 CACTATCACTGTGATTTAAGATAAGACCA--------------------CAAAACACAAGT------CACTGAGCTGGAATCTTAGA-----CTCTG-TTC-TTTTTCGCGTAGACACTGACAGTAATAGAAACCTAAGGGGAAGGGGAACCTTATTCTTCTTTACTGAAG-----ACATAAAAT-GCAG i mm10.chr15 C 0 C 0 s canFam3.chr10 40920853 178 - 69331447 CACTATT--TGTGA--AGGAAGAAGACAA-AGGGAAAGAGAATATGATCCACAATGTGAGACCTAACAATTGAGCAATAACCTTAAAGATCTTCATG-CTCTTTTTTCACATAAACAGTTATATCAAAAGAAAC--GGGGAAAA---CAATCACATTCTTCTT-ACTAAAGGTTTTATATAAAAACACAG i canFam3.chr10 C 0 C 0 e ponAbe2.chr22 30940889 0 + 46535552 C a score=107756.000000 s hg38.chr22_KI270876v1_alt 147558 47 + 263666 -----GCTAAGTAAAAGTAAACAAACCTCCC-CCCC-TGCATCTCCTGTTTTTC s panTro4.chr22 34525001 47 + 49737984 -----GCTAAGTAAAAGTAAACAAACCTCCC-CCCC-TGCATCTCCTGTTTTTC i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100491193 46 - 115148730 -----GCTAAATAAAAGTAAACAAACCTCCC-CCCA--GCATTTCCTGTTTTTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80644604 48 + 95678458 -----GCTAAGTAAAATTAAACAAACCTCCC-CCCTCTGCATTTCCTGTTTTTC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81071000 48 - 96509753 -----GCTAAGTAAAATTAAACAAACCTCCC-CCCTCTGCATTTCCTGTTTTTC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76328172 48 + 90941950 -----GCTAAGTAAAATTAAACAAACCTCCC-CCCTCTGCATTTCCTGTTTTTC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18596381 48 + 33263144 -----GCTAAGTAAAATTAAACAAACCTCCC-CCCTCTGCATTTCCTGTTTTTC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198296173 49 + 210400635 -----GCTAGGTAAAATTAAACAAACCTCCCACCCCCTACATTTCCTGTTTTTC i calJac3.chr1 C 0 I 308 s canFam3.chr10 40921031 52 - 69331447 GTGAAGTGAAATGAACCCAAACAAATAGTTT-TTTG-TTTGTTTCCAGTTTCTC i canFam3.chr10 C 0 C 0 e mm10.chr15 77144849 0 + 104043685 C e ponAbe2.chr22 30940889 0 + 46535552 C a score=142313.000000 s hg38.chr22_KI270876v1_alt 147605 48 + 263666 AAAAATGCCCCCTGGTTCCTCAGGAGGGAAAACTTTAAAGCATATATa s panTro4.chr22 34525048 48 + 49737984 AAAAATGCCCCCTGGTTCCTCAGGAGGGAAAACTTTAAAGCATATATa i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100491239 48 - 115148730 AAAAATGCCCCCTGGTTCCTCAGGAGGGAAAACTTTAAAGCATATATa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80644652 48 + 95678458 CAAAATGTCCCCTGGTTCCTCAGGAGGGAAAACTTTAAAGCATATATa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81071048 48 - 96509753 CAAAATGCCCCCTGGTTCCTCAGGAGGGAAAACTTTAAAGCATATATa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76328220 48 + 90941950 CAAAATGCCCCCTGGTTCCTCAGGAGGGAAAACTTTAAAGCATATATA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18596429 48 + 33263144 CAAAATGCCCCCTGGTTCCTCAGGAGGGAAAACTTTAAAGCATATATa i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198296530 48 + 210400635 aaaaaTGCCCCCTGGTTTCTCAGGAGAGAAAACTTTAAAGTATATTca i calJac3.chr1 I 308 C 0 s canFam3.chr10 40921083 46 - 69331447 --AAAAGCCTCCTGGTTTCTCAAGAGAGAAGACTTCAAAGCGTATACA i canFam3.chr10 C 0 C 0 e mm10.chr15 77144849 0 + 104043685 C e ponAbe2.chr22 30940889 0 + 46535552 C a score=747197.000000 s hg38.chr22_KI270876v1_alt 147653 333 + 263666 gtagcctcttttatccacagggcatatgctccaagactctcagtagattcctaacactgcagatagcactgaaccctcatatactgttttttttcctatacatatataactgtgagaaagtttaacttaacaaatcaggcacagtaagagattaacaacaatactaatagtaac--agaacaattataacaatatagtgtaataaaagttacgtgaatgtggcctccttctcgctctctctcaaaataccataccttagtattttcagactatggttgatcatgggtaattgaaaccatgaaaagggacactgtggatggggggattactTTACT s panTro4.chr22 34525096 333 + 49737984 gtagcctcttttatccacagggcatatgctccaagactctcagtagattcctaacactgcagatagcactgaaccctcatatactgttttttttcctatacatatataactgtgagaaagtttaacttaacaaatcaggcacagtaagagattaacaacaatactaatagtaac--agaacaattataacaatatagtgtaataaaagttacgtgaatgtggcctccttctcgctctctctcaaaataccataccttagtattttcagactatggttgatcatgggtaactgaaaccatgaaaaaggacactgtggatggggggattactTTACT i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100491287 334 - 115148730 gtagcctcttttatccacagggcatatgctccaagactctcaatagattcctaacactgcagatagcactgaaccctcatatactgttttttttcctatacatacataagtgtgagaaagtttaactt-acaaatcaggcacagtaagagattaacaacaatactaatagtaacatagaacaattataacaatataatataataaaagttatgagaatgtggtttccttctcgctctctctcaaaataccataccttagtattttcagactatggttgatcatgggtaattgaaaccatgaaaagggacaccgtggatgggggaattacCTTACT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80644700 333 + 95678458 gtagcctcctttctctacaggg-gtatgctccaagactctcagtggattcctaacactgcagacagcactgaaccctcatctactgtttttttccctatacatacctaactatgagaaagtttaactt-acaaatcaggcacagtaagagaataacaacaatactaatagtaacatagaaccattataacaatatactgtaataaaagttccctgaatgtggtcactttcttgctctctctcaaaataccataccttagaattttcagactatggttgatcatgggtaactgaaaccatgaaaagggacaccgtggatggggggattacCTTACT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81071096 333 - 96509753 gtagcctcctttctctacaggg-gtatgctccaagactctcagtggattcctaacactgcagacagcactgaaccctcatctactgttttttttcctatacatacctaactatgagaaagtttaactt-acaaatcaggcacagtaagagaataacaacaatactaatagtaacatagaaccattataacaatatactgtaatagaagttccctgaatgtggtcactttcttgctctctctcaaaataccataccttagaattttcagactatggttgatcatgggtaactgaaaccatgaaaagggacaccgtgcatggggggattacCTTACT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76328268 324 + 90941950 GTAGCCTCCTTTCTCTACAGGG-GTATGCTCCAAGACTCTCAGTGGATTCCTA---------ACAGCACTGAACCCTCACCTActgttttttttcctatacatacctAACTATGAGAAAGTTTAACTT-ACAAATCAGGCACAGTAAGAGAATAACAACAATACTAATAGTAacatagaacaattataacaatatactgtaataaaagttccCTGAATGTGGTcactttctcactctctctcaaaataccATACCTTAGAATTTTCAGACTATGGTTGatcatgggtaactgaaaccatgaaaaGGGACACCGTGGATGGGGGGATTACCTTACT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18596477 333 + 33263144 gtagcctcctttctctacaggg-gtatgctccaagactctcagtggattcctaacactgcagacagcactgaaccctcatctactgttttttttcctatacatacctaactatgagaaagtttaactt-acaaatcaggcacaataagagaataacaataatactaatagtaacatagaacaattataacaatatactgtaataaaagttccctgaatgtggtctctttctcgctctctctcaaaataccataccttagaattttcagactaaggttgatcatgggtaattgaaaccatgaaaagggacaccgtggatggggggattacCTTACC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198296578 332 + 210400635 gtagcctcctttacccacagggcatatgctccaagactctcagtggattccta-tactgcagatagcactgaaccctcatataatgttttttt-cctacacatacataactatgagaaagtttaactt-ataaatcaggcacagtaagagattaataacaatactaatagtaacagagaacaattgtaacaatatactgtaataaaagttatgtgaatgtggtctctttcttgctctctctgaaaatactgtaccttcatattttcagactatggttgatcacgggtaattgaaacaatgaaaaggcagaccatggatagggggattacCTTACT i calJac3.chr1 C 0 C 0 e mm10.chr15 77144849 0 + 104043685 C e canFam3.chr10 40921129 0 - 69331447 C e ponAbe2.chr22 30940889 0 + 46535552 C a score=394498.000000 s hg38.chr22_KI270876v1_alt 147986 166 + 263666 TAGATAAGCTTTTGGTCACAGTTGCTC-----TATGTTAGCGAACAACAGTCAGGTGACCATTTTAACTGAAATTAAGAAAGCTATAAACAATGCCATCTAC-TTATTTAGT-TCTACAATGTGTT-------------------GCCATTGAAATCTGTAGATAATCTGATTATCA-TTTAAATAGCAATGA s panTro4.chr22 34525429 166 + 49737984 TAGATAAGCTTTTGGTCACAGTTGCTC-----TATGTTAGCGAACAACAGTCAGGTGACCATTTTAACTGAAATTAAGAAAGCTATAAACAATGCCATCTAC-TTATTTAGT-TCTACAATGCGTT-------------------GCCATTGAAATCTGTAGATAATCTGATTATCA-TTTAAATAGCAATGA i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100491621 166 - 115148730 TAGATAAGCTTTTGGTCACAGTTGCTG-----TATATTAGCAAACAACAGTCAGGCGAACATTTTAACTGAAATTAAGAAAGCTCTAAACAATGCCATCTAC-TTATTTAGT-TCTACAACGTGTT-------------------GCCATTGAAATCTGTAGATAATCTGATTATCA-TTTAAATAGCAATGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80645033 162 + 95678458 GAGATAAGCTTTTTGTCACAGTTGCTC-----TATATTAGCAACCAACAGTCAGGTGACCATTTTAACTGAAGTTAAGAAAGCTCTAAACAATGCCATCTAC-TTCTTTAGT-TCCACAATGCATT-------------------CCCATTGAAATCT----ATAATCTGATTATCA-TTTAAATAGCAATGA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81071429 166 - 96509753 GAGATAAGCTTTTTGTCACAGTTGCTC-----TATATTAGCAACCAACAGTCAGGTGACCATTTTAACTGAAGTTAAGAAAGCTCTAAACAATGCCATCTAC-TTCTTTAGT-TCCACAATGCATT-------------------CCCATTGAAATCTATAGATAATCTGATTATCA-TTTAAATAGCAATGA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76328592 166 + 90941950 GAGATAAGCTTTTTGTCACAGTTGCTC-----TATATTAGCAACCAACAGTCAGGTGACCATTTTAACTGAAGTTAAGAAAGCTCTAAACAATGCCATCTAC-TTCTTTAGT-TCCACAATGCATT-------------------CCCATTGAAATCTATAGATAATCTGATTATCA-TTTAAATAGCAATGA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18596810 166 + 33263144 GAGATATGCTTTTGGTCACAGTTGCTC-----TATATTAGCAACCAACAGTCAGGCGACCATTTTAACTGAAGTTAAGAAAGCTCTAAACAATGCCATCTAC-TTCTTTAGT-TCCACAATGCATT-------------------CCCATTGAAATCTACAGATAATCTGATTATCA-TTTAAATAGCAATGA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198296910 170 + 210400635 TAGG-AAGCTGTTGGTCACAGTTACTCTATGTTATGTTAGCAAACAACAGTCAAGT-ACCATTTTAACTGAAGTTAAGAAAGCTCTAAACAATGCCATCTAC-TGCTTTGGT-TCCACAATGCATT-------------------CTCATTGAAATCTATAGATAATCTGGTTATTATTTTAAATAATAATGA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40921129 179 - 69331447 TGGGTGAACTCTTA--CTCTGTTGCTC-------TGCTAGCAAATGACAGACA----ACCATGTCGCACAAAATTAAGAAAACTCTAAGCACTGTCATCTACATTCTTTAATATGTATAATGCGTTTAGTCCATGGTGCCTTCTCCCCAGTGGAATTTCTAGAGAACCTTGAAACCA-GTGGAAGAGTAATGG i canFam3.chr10 C 0 C 0 e mm10.chr15 77144849 0 + 104043685 C e ponAbe2.chr22 30940889 0 + 46535552 C a score=583485.000000 s hg38.chr22_KI270876v1_alt 148152 273 + 263666 CTCAAAGAGTCTAAATATTGCTTATTGAGGTTTTCTAAGGTTCCACCAAGTTTGCAGC---------------------------------------------------------------AGTGGTCATCATTTTCACAGTCCGGAGTGCCCCTATCTTTTACACTGTTTAACACAGTGAAAAAATAGTACTTTGAATTTTCTCCCTC----TTCTGCAAGATTTGCAA-GGGCAGGTAATACATAGGAAAAAAGGATGCTTCTCCTTTTCCGCAAGACCACAAATCACACCAAACTATAAAAACATGGAAACTCTGTTTTTCCTGTGTTCTTGCTTAGG s panTro4.chr22 34525595 273 + 49737984 CTCAAAGAGTCTAAATGTTGCTTATTGAGGTTTTCTAAGGTTCCACCAAGTTTGCAGC---------------------------------------------------------------AGTGGTCATCATTTTCACAGTCCGGAGTGCCCCTATCTTTTACACTGTTTAACACAGTGAAAAAATAGTACTTTGAATTTTCTCCCTC----TTCTGCAAGATTTGCAA-GGGCAGGTAATACATAGGAAAAAAGGATGCTTCTCCTTTTCCGCAAGACCACAAATCACACCAAACTATAAAAACATGGAAACTCTATTTTTCCTGTGTTCTTGCTTAGG i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100491787 277 - 115148730 CTCAAAGTGTCTAAATATTGCTTATTGAGGTTTTCTAAGGTTCCATCAAGTTTGCAGC---------------------------------------------------------------AGTGGTCATCACTTTCACAGTCCGGAGTGCCCCTATCTTTTACATTGTTTAACACAGTGAAAAAATAGTACTTTGAATTTTCTCCCTCCCTATTCTGCAAGATTTGCAA-GGGCAGGTAATACCCAGGAAAAAAGGATGTTTCTCCTTTTCCACAAGACCACAAATCACACCAAACTACAAAAACATGGAAACGCTATTTTTCCTGTCTTCTTGCTTAGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80645195 340 + 95678458 CTCAAAGAGTCTAAATATTGCTTATTGAGGTTTTCTAAGGTTCCATCAAGTTTGCAGCAGTGGTCATCATTTTCACATTCCGGAGTGCACCTATTTTCTAAGGTTCCATCAAGTTTGCAGCAGTGGTCATCATTTTCACATTCCGGAGTGCCCCTATTTTCTACACTGTTTAACACAGTGAACAAATAGTACTTTGAATTTTCTCCCTCCCTATTCTGCAAGATTCGCAA-GGGCAGGTAATACATCGGAAAAAAGGATGCTTCTCTTTTTCCGCAAGACCACAAATCACACCAAACTACAAAACCATGGAAACTTTATTTTTCCTGTGTTCTTGCTTAGG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81071595 277 - 96509753 CTCAAAGAGTCTAAATATTGCTTATTGAGGTTTTCTAAGGTTCCATCAAGTTTGCAGC---------------------------------------------------------------AGTGGTCATCATTTTCACATTCCGGAGTGCCCCTATTTTCTACACTGTTTAACACAGTGAACAAATAGTACTTTGAATTTTCTCCCTCCCTATTCTGCAAGATTCGCAA-GGGCAGGTAATACATCGGAAAAAAGGATGCTTCTCTTTTTCCGCAAGACCACAAATCACACCAAACTACAAAACCATGGAAACTTTATTTTTCCTGTGTTCTTGCTTAGG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76328758 277 + 90941950 CTCAAAGAGTCTAAATATTGCTTATTGAGGTTTTCTAAGGTTCCATCAAGTTTGCAGC---------------------------------------------------------------AGTGGTCATCATTTTCACATTCCGGAGTGCCCCTATTTTCTACACTGTTTAACACAGTGAACAAATAGTACTTTGAATTTTCTCCCTCCCTATTCTGTAAGATTTGCAA-GGGCAGGTAATACATCGGAAAAAAGGATGCTTCTCTTTTTCCGCAAGACCACAAATCACACCAAACTACAAAACCAtggaaactttatttttcctgtgttcttgcttagg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18596976 277 + 33263144 CTCAAAGAGTCTAAATATTGCTTATTGAGGTTTTCTAAGGTTCCATCAAGTTTGCAGC---------------------------------------------------------------AGTGGTCATCATTTTCACATTCCGGAGTGCCCCTATTTTCTACACTGTTTAACACAGTGAACAAATAGTACTTTGAATTTTCTCCCTCCCTATTCTGCAAGATTCGCAA-GGGCAGGTAATACATCGGAAAAAAGGATGCTTCTCTTTTTCCGCAAGACCACAAATCACACCAAACTACAAAACCATGGAAACTTTATTTTTCCTGTGTTCTTGCTTAGG i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40921308 258 - 69331447 --CTAAAAGTATAACTACTGCTTACTAAGGCTTTCTAAAGTTCCATACATTTTAGAAC---------------------------------------------------------------A---ATCATCATTTCCACAGTCCAAA--GCACCTATCTTCTACACTA--------AGTGAACAAATGGTACTTTGACTTTTCTCCCT-----GTCTGCAAGAATTGCAGTTAACAGGTAATACACAGGAGAAAAGAATGTTTTTCTTTTCCACACAGACCACAAAGCATGCTAAACTACAAAAACATAGAAACTCTATTTTTCCTGTGATCTTGTTCATG i canFam3.chr10 C 0 C 0 e mm10.chr15 77144849 0 + 104043685 C e calJac3.chr1 198297080 0 + 210400635 C e ponAbe2.chr22 30940889 0 + 46535552 C a score=619074.000000 s hg38.chr22_KI270876v1_alt 148425 249 + 263666 -TATTTCTGCT-AATGAC---------TTTTTTCCCCCCATTAATTTTATCAGTCCTAGACT--CTCTGAAACTATCCTACCACTAAACCTCACTCAATACTAAAGAATTTGATTCTAGTTTCAGATAATGTCTTGTATAACGCATATACATACACACAC-----------------------AAA-GCAATGCCATAGCCATTCTCCTCACACCTTCCACTTCTGCCAAACTTCTCAAAC----TCTTTCCTCATATAAGCTTTTAACAACACTTTACTGACATCATTT s panTro4.chr22 34525868 250 + 49737984 -TATTTCTGCT-AATGAC--------TTTTTTTTCCCCCATTAATTTTATCAGTCCTAGACT--CTCTGAAACTATCCTACCACTAAACCTCACTCAATACTAAAGAATTTGATTCTAGTTTCAGATAATGTCTTGTATAACGCATATACACACACACAC-----------------------AAA-GCAATGCCATAGCCATTCTCCTCACACCTTCCACTTCTGCCAAACTTCTCAAAC----TCTTTCCTCATATAAGCTTTTAACAACACTTTACTGACATCATTT i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100492064 271 - 115148730 -TATTTCTGCT-AATGAC----------TTTTTTCCCCCATTGATTTTATCAGTCCTAAGCT--CTCTGAAACTATCCTACCACTAAACCTCACTCAATACTAAAGAATTTGATGCTAGTTTCAGATAATGTCTTGTATAacgcatatacacacacacacacacacacaaaaaaaaaaaaaaaaaa-acaaTGCCATAGCCATTCTCCTCACACCTTCCATTTCTGCCAAACTTCTCAAAC----TCTTTCCTCACATAAGCTTTTAACAAGACTTCACTGACATCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80645535 254 + 95678458 -TATTTCTGCTAAATGAC-------TTTTTTTTACCCCCATTAATTTTATCAATCCTAGACT--CTCTGAAACTATCCTACCACTAAACCTCACTCAATAATAAAGAATTTGATTCTAGTTTCAGACAATGTCTTGTATAACTCGTATACACACATACACAC---------------------ACA-ACAATGCCATAGCCATTCTTCTCATGCCTTCCACTTCTGCCAAACTTCTCAAAC----TCTTTCCTCACATAAGCTTCTAACAACACTTTATTGACATCATTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81071872 254 - 96509753 -TATTTCTGCTAAATGAC-------TTTTTTTTACCCCCATTAATTTTATCAATCCTAGACT--CTCTGAAACTATCCTACCACTAAACCTCACTCAATAATAAAGAATTTGATTCTAGTTTCAGACAATGTCTTGTATAACTCGTATACACACATACACAC---------------------ACA-ACAATGCCATAGCCATTCTTCTCATGCCTTCCACTTCTGCCAAACTTCTCAAAC----TCTTTCCTCACATAAGCTTCTAACAACACTTTATTGACATCATTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76329035 255 + 90941950 -tatttctgctaaatgac------tttttttttaccCCCATTAATTTTATCAATCCTAGACT--CTCTGAAACTATCCTACCACTAAACCTCACTCAATAATAAAGAATTtgattctaatttcagacaatgTCTTGTATAACtcgtatacacacatacacac---------------------aca-acaatGCCATAGCCATTCTTCTCATGCCTTCCACTTCTGCCAAACTTCTCAAAC----TCTTTCCTCACATAAGCCTCTAACAACACTTTATTGACATCATTT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18597253 253 + 33263144 -TATTTCTGCT-AATGAC-------TTTTTTTTACCCCCATTAATTTTATCAATCCTAGACT--CTCTGAAACTATCCTACCACTAAACCTCACTCAATAATAAAGAATTTGATTCTAGTTTCAGACAATGTCTTGTATAACTCGTATACACACATACACAC---------------------ACA-ACAATGCCATAGCCATTCTTCTCATGCCTTCCACTTCTGCCAAACTTCTCAAAC----TCTTTCCTCACATAAGCTTCTAACAACACTTTATTGACATCGTTT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198297080 250 + 210400635 -TATTTCAGT--AACGACTGAAAGTCTTTTTTTTAAACCATTACTTCTATCAGTCCTAGACT--CTCTGAAACTAACCTATCACTAAACCTCACTCAATAGTAAAGATGTTGATTGTAGTTTCAGATAATGTCTCGTATAACTCACATACACAC-----------------------------AAA-ACAATGCCATAGCCATTCTTCTCACCTCTTCCATTTCTGCCAAACTTCTCAAAT----TCTTTCCTCACATGAGCTTCTAACAACACTTTCCTGACATCA-TT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40921566 254 - 69331447 CATTTTTTGTT-CAAGAA-------TTATTTTTATCT---TTAATTGTATCAATCCTAGACTCCCTCTGAAACTATCCTACTTCTGAATCTCATTCAGTTCTCAAGAATTTGGTTCTAGATTCAAATAACGTCTAGCATAacacacacacacacacacacac---------------------acacaca----cacacacTTTGCTCTCACCATTTCTGCTGCTGCCAAACTTCCCAAACGATTTCTTCCCTCATTTGAACTTAAAATGGTAGTTTAATGACATCATAC i canFam3.chr10 C 0 C 0 e mm10.chr15 77144849 0 + 104043685 C e ponAbe2.chr22 30940889 0 + 46535552 C a score=463293.000000 s hg38.chr22_KI270876v1_alt 148674 179 + 263666 TCATGTAATTTACTGTATCCCACTTTGTATTATAATTACTTACACATCTTACGCATTCTTCCTTAATACTCCTTGAAATGAACTGTTCAACTGA-TTTTCACTCATAAATTAAAAATATATTCAATGCAACACTGCTTAATTTTCATTTAAAAGTATGTGTTCACTcttctgcttccaat s panTro4.chr22 34526118 179 + 49737984 TCATGTAATTTACCGTATCCCACTTTGTATTATAATTACTTACACATCTTACGCATTCTTCCTTAATACTCCTTGAAATGAACTGTTCAACTGA-TTTTCACTCATAAATTAAAAATATATTCAATGCGACACTGCTTAATTTTCATTTAAAAGTATGTGTTCACTcttctgcttccaat i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100492335 172 - 115148730 TCATGTAATTTACCATATCCCACTTTGTATTATGATTACTTACACATCTTAAGCATTCTTCCTTAATACTCCTTGAAATAAACTGTTCAACTGA-TTTTCACTCATAAATTAGAAATATACTCAATGAGACACTGCTTAATTTTCATTTAAAAGTATGTGTTCACTcctctgc------- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80645789 179 + 95678458 TCACGTAATTTACCATATTCCACCTTCTAGTATAATTACTTACACATCTTATGCATTCTTCCCTAATACTCCTTGAAATGAACTGTTCAACTCA-TTTTCAATCATAAATTTAAAATATATTCAATGAGACACTGCTTAATTTTCTTTTAAAAGTATGTGTTCACTcttcggctttcaat i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81072126 179 - 96509753 TCACGTAATTTACCATATTCCACCTTCTAGTATAATTACTTACACATCTTACGCATTCTTCCCTAATACTCCTTGAAATGAACTGTTCAACTCA-TTTTCAATCATAAATTTAAAATATATTCAATGAGACACTGCTTAATTTTCTTTTAAAAGTATGTGTTCACTCTTCGGCTTTCAAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76329290 179 + 90941950 TCACGTAATTTACCATATTCCACCTTCTAGTATAATTACTTACACATCTTATGCATTCTTCCCTAATACTCCTTGAAATGAACTGTTCAACTCA-TTTtcaatcataaatttaaaatatattcaatgagacactgcttaattttcttttaaaagtatgtgtTCACTCTTCGGCTTCCAAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18597506 179 + 33263144 TCACGTAATTTACCATATTCCACCTTCTAGTATAATTACTTACACATCTTATGCATTCTTCCCTAATACTCCTTGAAATGAACTGTTCAACTCA-TTTTCAATCATAAATTTAAAATATATTCAATGAGACACTGCTTAATTTTCTTTTAAAAGTATGTGTTCACTCTTCGGCTTCCAAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198297330 122 + 210400635 TCATGTAATTTACCATATTCCACCTTATGTTATAATTACTTACATATCTTATGCATTCTTCCCTAATACTCCTTGAAATGAACTGTTCAACTGA-TTTTCAATCATAAATGAAGAACATACTT--------------------------------------------------------- i calJac3.chr1 C 0 C 0 s mm10.chr15 77144849 173 + 104043685 TCACAGAAATTAATCAATGCTCCCTTAGATTACTGCTGTGCTTGCATCTTAGGCATTCGCTCTCAATGCTCCTTGAAATT-GCTGTTCAACTGA-TTTTCATGCATCAGCTAAGAATACATTAAATGAGACACTACTTTATTTTTGTTTAAAAATA----ATCTCT-TTTTGTTTCCAGT i mm10.chr15 C 0 I 469 s canFam3.chr10 40921820 175 - 69331447 TCATGGAATTTACTGTGTTTCACCTTGTATTTTAATTATTTATACATA-TATACATTCTCC---AATACTCCTAGGAATT-ACTGTTCAACTGAGTCTTTACTCATAAATTAGGAATATATTAAATAAGATACCACTTCGTTttcatttaaaaataagtagtcttacttccccttccagt i canFam3.chr10 C 0 C 0 e ponAbe2.chr22 30940889 0 + 46535552 C a score=61494.000000 s hg38.chr22_KI270876v1_alt 148853 27 + 263666 aaagatggagtaacaagaaccagattt s panTro4.chr22 34526297 27 + 49737984 aaagacggagtaacaagaaccagattt i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100492507 26 - 115148730 -aagatggagtaacaagaaccagactt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80645968 27 + 95678458 caagatggagtaacaagaaccacattt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81072305 27 - 96509753 CAAGATGGAGTAACAAGAACCACATTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76329469 27 + 90941950 CAAGATGGAGTAACAAGAACCAcattt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18597685 27 + 33263144 CAAGATGGAGTAACAAGAACCACATTT i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40921995 27 - 69331447 caagatggagtaacgagaaccagactt i canFam3.chr10 C 0 C 0 e mm10.chr15 77145022 469 + 104043685 I e calJac3.chr1 198297452 0 + 210400635 C e ponAbe2.chr22 30940889 0 + 46535552 C a score=451831.000000 s hg38.chr22_KI270876v1_alt 148880 230 + 263666 aaggccaggcgcagtggctcacgcctgtaatcccagcactttgggaggccgaggt-gggcagatcacctgaggtcaggagttcg------acctggccaacaaggtgaaaccccatctctactaaaaatacaaaaattagcagggcataatggcacatgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttgagcctgggaaacggaggttgcagtgagccaag s panTro4.chr22 34526324 230 + 49737984 aaggccaggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggt-gggcagatcacctgaggtcaggagttcg------acctggccaacaaggtgaaaccccatctctactaaaaatacaaaaattagcagggcataatggcacatgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttgagcctgggaaacggaggttgcagtgagccaag i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100492533 236 - 115148730 aaggccaggtgtggtggctcacacctgtaatcccagcactttgggaggccgaggt-gggcagatcatctgaggtcaggagttcgagaccaacctggccaacaaggcgaaaccccatctctactaaaaatacaaaaattagcagggtataatggcacatgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttgagcctgggaaatggaggttgcagtgagctgag i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80645995 205 + 95678458 aaggccaggtgc-------------------------------ggaggccaaggc-aggcagatcacctgaggtcaggagtttgagtccaacctggccaatgtggtgaaaccctatctctactaaaaatacaaaaattagcagagcgtagtggcacatgcctgaaatctcagctacttgggaggctgaggcaggagaactgcttgagcctgggagacgggggttacagtgagccaag i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81072332 205 - 96509753 AAGGCCAGGTGC-------------------------------ggaggccaaggc-aggcagatcacctgaggtcaggagtttgagtccaacctggccaatgtggtgaaaccctatctctactaaaaatacaaaaattagcagagcgtagtggcacatgcctgaaatctcagctacttgggaggctgaggcaggagaactgcttgagcctgggagacgggggttacagtgagccaag i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76329496 205 + 90941950 aaggccaggtgc-------------------------------ggaggccaaggt-aggcagatcacctgaggtcaggagtttgagtccaacctggccaatgtggtgaaaccctatctctactaaaaatacaaaaattagcagagcatagtggcacatgcctgaaatctcagctacttgggaggctgaggcaggagaactgcttgagcctgggagacggaggttacagtgagccaag i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18597712 202 + 33263144 AAGGCCAGGTGC-------------------------------ggaggccaaggc-aggcagatcaccagaggtcaggagtttgagtccaacctggccaatgtggtgaaaccctatctctactaaaaatacaaaaatt---agagcgtagtggcacatgcctgaaatctcagctacttgggaggctgaggcaggagaactgcttgagcctgggagacggaggttacagtgagccaag i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198297452 236 + 210400635 -Gggctgggcatggtggctcacatctgtaatcccagcactttgggaggccgaggcaaggtggatcacctgaggtgaggagcccatgactagcctggtcaacatggtgaaaccccatctctgctaaaaatacaaaaattagccaggcatagtggcacatgcctgtaatcccagctacttgggaggctgaggcaggagaattgtttaagtctgggagacagaggctgcagtaagccaag i calJac3.chr1 C 0 C 0 e mm10.chr15 77145022 469 + 104043685 I e canFam3.chr10 40922022 0 - 69331447 C e ponAbe2.chr22 30940889 0 + 46535552 C a score=10181.000000 s hg38.chr22_KI270876v1_alt 149110 6 + 263666 attctg s panTro4.chr22 34526554 6 + 49737984 attctg i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100492769 6 - 115148730 attgtg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80646200 6 + 95678458 attgcg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81072537 6 - 96509753 attgcg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76329701 6 + 90941950 attgcg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18597914 6 + 33263144 actgcg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198297688 6 + 210400635 actgca i calJac3.chr1 C 0 C 0 s canFam3.chr10 40922022 6 - 69331447 atcctg i canFam3.chr10 C 0 C 0 e mm10.chr15 77145022 469 + 104043685 I e ponAbe2.chr22 30940889 0 + 46535552 C a score=1012258.000000 s hg38.chr22_KI270876v1_alt 149116 332 + 263666 ccactgcactccagcctggccaacagactaagaatctgtct----------caaaaaaaaaaaaaaa--------aaaga----------aacagatttttctttttacctgaaactact-aaaaaaaccacaaaatacatgaaacaacagcactcaagacattgtctagtaggcaaggaaggacagagattccagagtcaggaaacaagcaagttgagctttacaactgccccaacttatcacatggataaagtttccaggctgcagcagagaaggaaggaccca-ggcagaacctggtgggttccatgaattgagaagatagacctagaagtctggagaagccaagacag--------cacaggggac s panTro4.chr22 34526560 333 + 49737984 ccactgcactccagcctggccaacagactaagaatctgtct---------ccaaaaaaaaaaaaaaa--------aaaga----------aacagatttttctttttacctgaaactactaaaaaaaaccacaaaatacatgaaacaacagcactcaagacattgtctagtaggcaaggaaggacagagattcctgagtcaggaaacaagcaagttgagctttacaactgccccaacttatcacatggataaagtttccaggctgcagcagagaaggaaggaccca-ggcagaacctggt-ggttccatgaattgagaagatagacctagaagtctggagaagccaagacag--------cacaggggac i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30940889 332 + 46535552 tcattgcactccagcctggacaacagactgagaatctgtct----------caaaaaaaaaaaaaaa--------aaaga----------aacagatttttctttctacctgaaactact-aaaaaaaccacaaaatacatgaaacaacagcactcaagacattgtctagtaggcaaggaaggacagagattcctgagtcaggaaacaagcaagttgagctttacaactgccccaacttatcacatggataaagtttccaggctgcagcagagaaggaaggaccca-ggcagaacctggcgggttccatgaattgagaagatagacctagaagtctggagaagccaagacag--------cacaggggac i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100492775 339 - 115148730 ccactgcactccagcctggctgacagactgataatctgtct----------caaaaaaaaaaaaaaa--------aaaaaaaaaaaaagcaacagatttttctttctacctgaaactact-aaaaaaaccac-gaatacatgaaacaacagcactcaagacattgtctagtaggcaaggaaggac--agattcctgagtcaggaaacaagcaagttgagctttataactgccccaacttatcacatggataaagtttccaggctgcagcagagaaggaaggaccca-ggcagaacctggtgggttccatgaattgagaagatagacctagaagtctggagaagccaatacag--------cacaggggac i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80646206 347 + 95678458 ccactgcactccagcctggccgacagagtgagactctgtcttaaaaaaaaccaaaaaaaaaaaaaaa---ccccaaaaaa----------aaccaatttatctttctacctgaaactact-aaaaaaaacacaaaatacatgaaacaacagcacttaagacattgtctagaaggcaaggaaagacagagattcctcagtcaggaaacaagcaagttgagctttacaactgccccaacttatcacatgggtaaagtttccaggctgtggcagagaaggagggaccca-ggcagaacctggtgggttccatgaattgagaagatagaactagaagtctggagaagccaagacag--------cacaggggac i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81072543 347 - 96509753 ccactgcactccagcctggccgacagagtgagactctgtcttaaaaaaaaccaaaaaaaaaaaaaaa---aCCCAAAAAA----------AACCAatttatctttctacctgaaactact-aaaaaaaacacaaaatacatgaaacaacagcacttaagacattgtctagaaggcaaggaaagacagagattcctcagtcaggaaacaagcaagttgagctttacaactgccccaacttatcacatgggtaaagtttccaggctgtggcagagaaggagggaccca-ggcagaacctggtgggttccatgaattgagaagatagaactagaagtctggagaagccaagacag--------cacaggggac i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76329707 350 + 90941950 ccactgcactccagcctggctgacagagtgagactctgtcttaaaacaaaacaaaaaaaaaaaaaaaacccccccaaaaa----------accaGATTTATCTTTCTACctgaaactact-aaaaaaaacacaaaatacatgaaacaacagCACTTAAGACATTGTCTAGAAGGCAAGGAAAGACAGAGATTCCTCAGTCAGGAAACAAGCAAGTTGAGCTTTACAACTGCCCCAACTTATCACATGGGTAAAGTTTCCAGGCTGTGGCAGAGAAGGAGGGACCCA-GGCAGAACCTGGTGGGTTCCATGAATTGAGAAGATAGAACTAGAAGTCTAGAGAAGCCAAGACAG--------CACAGGGGAC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18597920 346 + 33263144 ccactgcactccagcctggccaacagagtgagactctgtcttaaaaacaaacaaacaaacaaaaaaa----CCCCAAAAA----------accagatttatctttctacctgaaactact-aaaaaaaacacaaaatacatgaaacaacagcacttaagacattgtctagaaggcaaggaaagatagagattcctgagtcaggaaacaagcaagttgagctttacaacttccccaacttatcacatgggtaaagtttccaggctgtggcagagaaggagggaccca-ggcagaaactggtgggttccatgaattgagaagatagaactagaagtctggagaagccaagacag--------cacaggggac i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198297694 323 + 210400635 ccactgcactccagcctagctgacagagctagactctgtct----------caaaaaacaacaacaa------------a----------aacagattgatctttctgcctcaaactact-aaaataaat---aaataaatgaaacaacagcactcaagacactgactagtaggcaaggaaggaaagagattcctaagacatgaaacaagcaagttgagctttacaactgccccaacttatcacatggataaagtttacaggctgtgtcagagaaggagggaccca---cagagcctggtgggttccatgaattgagaagacagacctggaagtctggcgaagccaagACCA--------CACATGGGAC i calJac3.chr1 C 0 I 1286 s canFam3.chr10 40922028 265 - 69331447 -----------------------------------ctgctt----------caaaaaaacaaaacac-----------------------tgcag--------------------------agaa--------aaataaatgaaacagcagtactcaagacactgtatggcaggcaaagaaggacactgacccacaagacaggaaa-aaccaaggtgagctttgtaactg-tccagcttactgc-cagagaaagttcccaggctgccgcactgacagagggaagcagggcagaagcaggcggtcaccctgagttgaagacacagagctggaagtctagggaagccaacacagctagagttcacagggaag i canFam3.chr10 C 0 C 0 e mm10.chr15 77145022 469 + 104043685 I a score=896149.000000 s hg38.chr22_KI270876v1_alt 149448 320 + 263666 -----ggtactggagaaagt---------------------tgcagagagaaagagagctctaaagat---------------ctcaagtactcagttgagtgatgactgcca-catctatgtgtgaaacttccagaggctggggaaagaaccacctgaaagaaatacagggaacagtactaggagctcacacagtgccaagaat-aatcctgttcttaacagccagagtggaaaacctaatgatgtaaggagcatccattagagttttaaaaagagtcttgcctcagtggccaggaaaaattaaccagagactaaacacagctctagtcctgtctaacaaagcttaaaaaacaagacctgag s panTro4.chr22 34526893 320 + 49737984 -----ggtactggagaaagt---------------------tgcagagagaaagagagctctaaagat---------------ctcaagtactcagttgagtgatgactgcca-catctatgtgtgaaacttccagaggctggggaaagaaccacctgaaagaaacacagggaacagtactagaagctcacacagtgccaagaat-aatcctgttcttaacagccagagtggaaaacctaatgatgtaaggagcatccattagagtcttaaaaagagtcttgcctcagtggccaggaaaaattaaccagagactaaacacagctctagtcctgtctaacaaagcttaaaaaacaagacctgag i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30941221 341 + 46535552 -----ggtactggagaaagttgcagagagactggagaaagctgcagagagagagagagctctaaagat---------------ctcaagtactcagttgagtgatgactgcca-catctatgtgtgaaacttccagaggctggggaaagaaccacctgaaagaaatacaaggaacagtactaggagctcacacagtgccaagaat-aatcctgttcttaacagccagagtggaaaacctaacgatgtaaggagcatccattagagtcttaaaaagagtcttgcctcagtggccaggaaaaattaaccagagactaaacacagctctagtcctgtctaacaaagcttaaaaaacaagacctgag i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100493114 321 - 115148730 -----agtactggagaaaac---------------------tgcagagagaaagagagctctaaagat---------------ctcaagtactcagttgagtgatgactgccaccatctatgtgtgaaacttccagaggctggggaaagaaccacctgaaagaaatacagggaacagtactaggagctcacacagtgccaagaat-aatcctgttcttaacagccagagtggaaaacctaatgatgtaaggagcatccattagagtcttaaaaagagtcttgcctcagtggccaggaaaaattaaccagagactaaacacagctctagtcctgtctaacaaagcttaaaaaacaagacctgag i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80646553 319 + 95678458 -----ggtactggagaaagc---------------------tgcagacagaaagggagctctaaagat---------------ctcaagtactcaattgagtgctgactgcca-catctatgtgtgaaacttccagaggctggggaaagaaccacttgaaagaaatacaggcaacagtactaggagctcacacagtgccaagaat-aagcctgttcttaacagccagagtggaaaacctaatgatttaaggagcgtcgattagagtcttaaacagagtcttgcctcagtggcca-gaaaaattaaccagagactaaacacagctctagtcctgtctaacaaagcttaaaaaacaagacctgag i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81072890 319 - 96509753 -----ggtactggagaaagc---------------------tgcagacagaaagagagctctaaagat---------------ctcaagtactcaattgagtgctgactgcca-catctatgtgtgaaacttccagaggctggggaaagaaccacttgaaagaaatacaggcaacagtactaggagctcacacagtgccaagaat-aagcctgttcttaacagccagagtggaaaacctaatgatttaaggagcgtcgattagagtcttaaacagagtcttgcctcagtggcca-gaaaaattaaccagagactaaacacagctctagtcctgtctaacaaagcttaaaaaacaagacctgag i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76330057 320 + 90941950 -----GGTACTGGAGAAAGC---------------------TGCAGACAGAAAGACAGCTCTAAAGAT---------------CTCAAGTACTCAATTGAGTGCTGACTGCCA-CATCTATGTGTGAAACTTCCAGAGGCTGGGGAAAGAACCACTTGAAAGAAATACAGGCAACAGTACTAGGAGCTCACACAGTGCCAAGAAT-AAGCCTGTTCTTAACAGCCAGAGTGGAAAACCTAATGATTTAAGGAGCGTCGATTAGAGTCTTAAACAGAGTCTTGCCTCAGTGGCCAGGAAAAATTAACCAGAGACTAAACACAGCTCTAGTCCTGTCTAACAAAGCTTAAAAAACAAGACCTGAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18598266 320 + 33263144 -----ggtactggagaaagc---------------------tgcagacagaaagagagctctaaagat---------------ctcaagttctcaattgagtgctgactgcca-catctatgtgtgaaacttccagaggctggggaaagaaccacttgaaagaaatacaggcaacagtactaggagctcacacagtgccaagaat-aagcctgttcttaacagccagagtggaaaacctaatgatttaaggagcgtcgattagagtcttaaacagagtcttgcctcagtggccaggaaaaattaaccagagaccaaacacagctctagtcctgtctaacaaagcttaaaaaacaagacctgag i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40922293 331 - 69331447 agtctcacagaagagaaatc---------------------tgcagagaga----gaactctgaagatgtacagagagttgccctcaactactcagttaagtcatgatcactg-cacatgtgtgaggagctacctgaggctggagaaatgaccatctgaaggagtcagatggaactgtgccagcagatcatacaatgccaggaacaaagcctgttcccaacaatgagagtagaaaacctaataattcaagaaacattagtgagagt-----actgagtcttgcctcaacaacgaggaataattaagcaaagactaaacacagctctggacctttctaccaaaactt-aaaaacaagacccaaa i canFam3.chr10 C 0 I 106 e mm10.chr15 77145022 469 + 104043685 I e calJac3.chr1 198298017 1286 + 210400635 I a score=737963.000000 s hg38.chr22_KI270876v1_alt 149768 316 + 263666 gtcgggcgtggtggctcatgcctgt---aatcccagcactttgggaggccgaggcgggcggatcttgaggtcaggagatagagaccatcctggctaacacagcga---aaccccatctctactaaaaagacaaaaaattagccaggcgtggtggtacgcacctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgcagtgagccgagatcgcgccactgcactccagcctgggcgacagagcgagactccatctcaaaaaacaaacaacaaaacaaaacaaacaaacaacc s panTro4.chr22 34527213 316 + 49737984 gtagggcgtggtggctcatgcctgt---aatcccagcactttgggaggccgaggcgggcggatcatgaggtcaggagatagagaccatcctggctaacacagcga---aaccccatctctattaaaaagacaaaaaattagccaggcgtggtggcacgcacctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgcagtgagccgagatcgcgccactgcactccagcctgggcgacagagcgagcctccatctcaaaaaacaaacaacaaaacaaaacaaacaaacaacc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30941562 316 + 46535552 gtcaggtgtggtggctcatgcctgt---aatcccagcactttgggaggccaaggtgggcagatcatgtggtcaggagatagagaccatcctggctaacacagcga---aaccccatctctactaaaaatacaaaaaattagccaggtgtggtggcacgcacctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacctgggaggcagaggttgcagtgagccgagatcgcaccactgcactccagcctgggtgacagagcgagactccgtctcaaaaaacaaacaaaaaaacaaaacaaacaaacaacc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100493435 302 - 115148730 gtcgggcgtggtggctcatgcctgt---aatcccagcactttgggaggccgaggtgggcggatcatgaggtcaggagatagagaccatcctggctaacacagcaaaacaaccccatctctactaaaaatacaaaaaattagccgggcgtggtggcacgcacctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaacctgggaggcggaggttgcagtgagccgagatcgcgccactgcattccagcctgggcgacagagtgagactccatctcaa-----------------aaaacaaacaaacaacc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80646872 318 + 95678458 gttgggcgt-gtggctcatgcctgtataaatcccagcactttgggaggatgaggcgggcggatcacgaggtcaggagatagagaccatcctggctaacacagcga---aaccccatctccactaaaaacccaaaaaattagctgggcgtgttggcacgcacctgtaattccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggcagaggttgcagtgagccgagattgcaccactgtactccagcctgggtgacagagcgagactctgtctcaaaaaacaaacgaacaaacaaaacaaacaaacaacc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81073209 318 - 96509753 gttgggcgt-gtggctcatgcctgtataaatcccagcactttgggaggatgaggcgggcggatcacgaggtcaggagatagagaccatcctggctaacacagcga---aaccccatctccactaaaaacccaaaaaattagctgggcgtgttggcacgcacctgtaattccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggcagaggttgcagtgagccaagattgcaccactgtactccagcctgggtgacagagcgagactctgtctcaaaaaacaaacgaacaaacaaaacaaacaaacaacc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76330377 318 + 90941950 GTTGGgcgt-gtggctcatgcctgtataaatcccagcactttgggaggatgaggcgggcggatcacgaggtcaggagatagagaccatcctggctaacacagcga---aaccccatctccactaaaaacacaaaaaattagctgggcgtgttggcacgcacctgtaattccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggcggaggttgcagtgagccgagattgcaccactgtactccagcctgggtgacagagcgagactctgtctcaaaaaacaaacgaacaaacaaaacaaacaaacaacc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18598586 318 + 33263144 gttgggcgt-gtggctcatgcctgtacaaatcccagcactttgggaggctgaggcgggcggatcacaaggtcaggagatagagaccatcctgggtaacacagcga---aaccccatctccactaaaaacacaaaaaattagctgggcatgttggcacgcacctgtaattccagctacttgggaggctgaggcaggagaatcacttgaacccgggaggcggaggttgcagtgagccgagattgcaccactgtacgccagcctgggtgacagagcgagactctgtctcaaaaaacaaacgaacaaacaaaacaaacaagcaacc i chlSab2.chr19 C 0 C 0 e mm10.chr15 77145022 469 + 104043685 I e canFam3.chr10 40922624 106 - 69331447 I e calJac3.chr1 198298017 1286 + 210400635 I a score=28907.000000 s hg38.chr22_KI270876v1_alt 150084 11 + 263666 caagacccgaa s panTro4.chr22 34527529 11 + 49737984 caagacctgaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30941878 11 + 46535552 caagacctgaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100493737 11 - 115148730 caagacctgaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80647190 11 + 95678458 caagacctgaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81073527 11 - 96509753 caagacctgaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76330695 11 + 90941950 caagaCCTGAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18598904 11 + 33263144 caagacctgaa i chlSab2.chr19 C 0 C 0 s mm10.chr15 77145491 10 + 104043685 caagaccaag- i mm10.chr15 I 469 C 0 e canFam3.chr10 40922624 106 - 69331447 I e calJac3.chr1 198298017 1286 + 210400635 I a score=153298.000000 s hg38.chr22_KI270876v1_alt 150095 52 + 263666 aggatcaaactttttctaagaaacgcagttgtgctgtagataaagctcaa-----------ga s panTro4.chr22 34527540 52 + 49737984 aggatcaaactttttctaagaaacgcagttgtgctgtagataaagctcaa-----------ga i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30941889 52 + 46535552 aggatcaaactttttctaagaaacgtagttgtgctgtagataaagctcaa-----------ga i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100493748 52 - 115148730 aggatcaaactttttctaagaaatgtagttgtgctgtagataaagctcaa-----------ga i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80647201 48 + 95678458 aggatcaaactttttctaagaaacttagttgtgctg----taaagctcaa-----------ga i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81073538 48 - 96509753 aggatcaaactttttctaagaaacttagttgtgctg----taaagctcaa-----------ga i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76330706 48 + 90941950 AGGATCAAACTTTTTCTAAGAAACTTAGTTGTGCTg----taaagctcaa-----------ga i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18598915 48 + 33263144 aggatcaaactttttctaagaaacttagttgtgctg----taaagctcaa-----------ga i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198299303 52 + 210400635 aggatcaaacttttcctaaggaacttagttgtgccgtagataaagctcaa-----------ga i calJac3.chr1 I 1286 C 0 s mm10.chr15 77145501 56 + 104043685 agggctgtgttacttgtaagaaacggagctgtg-------tgaagctcaaaaataaagtttga i mm10.chr15 C 0 C 0 e canFam3.chr10 40922624 106 - 69331447 I a score=2906971.000000 s hg38.chr22_KI270876v1_alt 150147 878 + 263666 atatttatagacataaaaaattatctagaac-ccaacaagataaaattcacaatgtatggcatccag----tcaaaaattaccaggcatgcaaagaagcaggaaaactacaacacataatgctgag---aaaaataaattaatcacaactcacccagaactaatacatatgttagaatt-agcagatgaggacattaaaacatttgtgtctcatatgttcaagataaa--------aaagga--------aaaaaatgaacatgct---aagagacatgagaggtgt------gaaaaagacctacataaaaattctagagacgaaagctata----atctgagatttaaaaaacacatatacacccactggattggatta---atggcagactagatgttg-cagggaaaaaaaggtaagtacatttgatgttaccat-atagaaaagatccaaaaagaaacagagagagGGAGGGAAAAAGACCT-----AAAA-----GAATAGTGA-GCCTTGAAAATGACATAGAATGGCTGGTTAGGATCTGCTATATATCTGCGATGACAA-GTTTTCAAAAGTAGTATGTAAAGAA--TCTAACTCTTGGCCATCTTGAGTGGAAGGCAAAGCAGAGAGGAAGATGACTATGCTCAATATA-CCACATTTGGTATACTTGCC-ATGGGTTGCCAATCCCTAAGATTTCATTGTCACCTTC-CACTTCTCTTTCTCTGTCGTGCCCTTTCCCCAGTTGCGGGAGTCATGCCCTTCGTCCTTCCTGCCTGACTCCCCAGGAGGCTAGAGCTCCTATGCCATTTACCGTC--------------A---TAC----------AC---CCAGGCTTCCACTTTCACTAAAACATCTACAATACAAGAGTTTCCTGTGTCCCTCAAATAGTTGTTTATTCCAAAATCCTCCCAATCTTCTAGCCATGTAAAGCATC s panTro4.chr22 34527592 878 + 49737984 atatttatagacataaaaaattatctagaac-ccaacaagataaaattcacaatgtctggcatccag----tcaaaaattaccaggcatgcaaagaagcaggaaaactacaacacataatgctgag---aaaaataaattaatcacaactcacccagaactaatacatatgttagaatt-agcagatgaggacattaaaacatttgtgtctcatatgttcaagataaa--------aaagga--------aaaaaatgaacatgct---aagagacatgagaggtgt------gaaaaagacctacataaaaattctagagatgaaagctata----atctgagatttaaaaaacacatatacacccactggattggatta---atggcagactagatgttg-cagggaaaaaaaggtaagtacatttgatgttaccat-atagaaaagatccaaaaagaaacagagagagGGAGGGAAAAAGACCT-----AAAA-----GAATAGTGA-GCCTTGAAAATGACATAGAATGGCTGGTTAGGATCTGCTATATATCTGCGATGACAA-GTTTTCAAAAGTAGTATGTAAAGAA--TCTAACTCTTGGCCATCTTGAGTGGAAGGCAAAGCAGAGAGGAAGATGACTATGCTCAATATA-CCACATTTGGTATATTTGCC-ATGGGTTGCCAATCCCTAAGATTTCATTGTCACCTTC-CACTTCTCTCTCTCTGTCGTGTCCTTTCCCCAGTTGCAGGAGTCATGCCCTTCGTCCTTCCTGCCTGACTCCCCAGGAGGCTAGAGCTCCTATGCCATTTACCGTC--------------A---TAC----------AC---CCAGGCTTCCACTTTCACTAAAACATCTACAATACAAGAGTTTCCTGTGTCCCTCAAATAGTTGTTTATTCCAAAATCCTCCCAATCTTCTAGCCATGTAAAGCATC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30941941 879 + 46535552 atatttacggaaataaaaaattatctagaat-ccaacaagataaaattcacaatgtctggcatccaa----tcaaaaattaccaggcatgcaaagaagcaggaaaactacaacacataatgctgag---aaaaattaattaatcacaactcacccagaactaatacatatgttagaattaagcagat---gacattaaaacatttgtgttccatatgttcaagataaa--------aaagga--------aaaaaatgaacatgctaagaagagacatgagaggtgt------gaaaaagacctacacaaaaattctagagacaaaagctatc----atctgagatttaaaaaacacacatacacccactggattggatta---atggcagactagatgtta-cagggaaaaaaaggtaagtacatttgatgttaccat-atagaaaagatccaaaaagaaacagagagagGGAGGGAAAAAGACCT-----AAAA-----GAATAGTGA-GCCTTGAAAATGACATAGAATGGCTGGTTAGGATCTGCTATATATCTGCGATGACAA-GTTTTCAAAAGTAGTATGTAAAGAA--TCTAACTCTTGGCCATCTTGAGTGGAAGGCAAAGCAGAGAAGAAGATGACTATGCTCAATATA-TCACATTTGGTATACTTGCC-ATGGGTTGCCAATCCCTAAGATTTCATTGTCACCTTC-CACTTCTCTTTCTCTGTCGTGCCCTTTCCCCAGTTGCGGGAGTCATGCCCTTCGTCCTTCCTGCCTGACTCCCCAGGAGGCTAGAGCTCCTATGCCATTTACCGTC--------------A---TAC----------AC---ACAGGCTTCCACTTCCACTAAAACATCTACAATACAAGAGTTCCCTGTGCCCCTCAAATAGTTGTTTATTTCAAAATCCTCCCAATCTTCTAGCCACGTAAAGCATC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100493800 880 - 115148730 atatttacagaaataaaaaattatctagaat-ccaacaagataaaattcacaatgtctggcatccaa----taaaaaattaccaggcacgcaaagaaccaggaaaactacaacacataatgctgag---aaaaataaattaatcacaactcacccagaactaatacatatgttagaatt-agcagatgaggacatt-aagcagatgtgtcccatatgttcaagataaa--------aaagga--------aaaatatgaacatgctaagaagagacatgagaggttt------gaaaaagacccacataaaagttctagagacgaaaactata----atctaagatttaaaaaacacacatacacccactggattggatta---atggcagactagacgttg-cagggaaaaaaaggtaagtacatttgatgttaccat-atagaaaagatccaaaaagaaacagagagaAGGAGGGCAAAAGACCT-----AAAA-----GAATAGTGA-GCCTTGAAAATGACATAGAATGGCTGGTTAGGATCTGCTATATATCTGCGATGACAA-GTTTTCAAAAGTAGTAGGTAAAGAA--TCTAACTCTTGGCCATCTTGAGTGGAAGGCAAAGCAGAGAGGAAGATGACTATGCTCAATATA-CCACATTTGGTACACTTGCC-ATGGGTTGCCAATCCCTAAGATTTCATTGTCACCTTC-CACTTCTCTTTCTCTGTTGTGGCCTTTCCCCAGTTGCAGGAGTCATGCCCTTCGTCCTTCCTGCCTGACTCCCCAGGAGGCTAGAACTCCTATGCCATTTATCGTC--------------A---TAC----------AC---ACAGGCTTCCACTTCCACTACAACATCTACAATACAAGAGTTTCCTGTGTCCCTCAAATAGTTGTTTATTCCAAAATGCTCCCAATCTTCTAGCCATGTAAAGCATC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80647249 885 + 95678458 atatttacagaaataaaaaattatctagcat-ccaacaagataaaattcacaatgtctggcatccaa----tcaaaaattaccaggcatgcaaagaagcaggaaaaatacaacacataatgctgag---aaaaataaattactcacaactcaccgagaactaatacatacgttagaatt-agcagatgaggacattaaaacatttgtgtcccatacgttcaagataaa--------aaaggaaaaaagggaaaaaatgaacatgctaagaagagacatgagaggtgt------gaaaaagagccacattaaa-ttctagagatgaaaactata----atctgagatttaaaaaacacatacacacccactggattggatta---atggcagactagacgttg-cagggaaaaaaaggtaagtacatttgatgttaccat-atagaagctatccaaaaagaaacagagagagGGAGGGAAAAAGACCT-----AAAA-----GAACAGTGA-GCCTTGAAAATGACATAGAATGGCTGGTTAGGATCTGCTACATATCTGCGATAACAA-GTTTTCAAAAGTAGTATGTAAAGAA--TCTAACTCTTGGCCATCTTGAGTGGAAGGCAAAGCAGAGAGGAAGATGACTATGCTCAATATA-CCATATTTGGTATACTTGCC-ATGGGTTGCCAATCCCTAAGATTTCATTGTCACCTTC-CACTTCTCTTTCTCTGTCATGCTCTTTCCCCAGTTGCGGGAGTCATGCCCTTCTTCCTTCCTGCCTGACTTCCCAGGAGGCTAGAGCTCCTATGCCATTTACCGTC--------------A---TAC----------AC---ACACGTTTCCACCTCCACTAGAACATCTATACTACAAGAGTTTCCTGTGTCCCTCAAATA---GTTTATTCCAAAATCTTCCCAATCTTCTAGCTATGTAAAGCATG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81073586 885 - 96509753 atatttacagaaataaaaaattatctagcat-ccaacaagataaaattcacaatgtctggcatccaa----tcaaaaattaccaggcatgcaaagaagcaggaaaaatacaacacataatgctgag---aaaaataaattaatcacaactcaccgagaactaatacatacgttagaatt-agcagatgaggacgttaaaacatttgtgtcccatacgttcaagataaa--------aaaggaaaaaagggaaaaaatgaacatgctaagaagagacatgagaggtgt------gaaaaagacccacattaaa-ttctagagatgaaaactata----atctgagatttaaaaaacacatacacacccactggattggatta---atggcagactagacgttg-cagggaaaaaaaggtaagtacatttgatgttaccat-atagaagctatccaaaaagaaacagagagagGGAGGGAAAAAGACCT-----AAAA-----GAACAGTGA-GCCTTGAAAATGACATAGAATGGCTGGTTAGGATCTGCTAGATATCTGCGATAACAA-GTTTTCAAAAGTAGTATGTAAAGAA--TCTAACTCTTGGCCATCTTGAGTGGAAGGCAAAGCAGAGAGGAAGATGACTATGCTCAATATA-CCATATTTGGTATACTTGCC-ATGGGTTGCCAATCCCTAAGATTTCATTGTCACCTTC-CACTTCTCTTTCTCTGTCATGCTCTTTCCCCAGTTGCGGGAGTCATGCCCTTCTTCCTTCCTGCCTGACTTCCCAGGAGGCTAGAGCTCCTATGCCATTTACCGTC--------------A---TAC----------AC---ACAGGTTTCCACCTCCACTAGAACATCTATACTACAAGAGTTTCCTGTGTCCCTCAAATA---GTTTATTCCAAAATCTTCCCAATCTTCTAGCTATGTAAAGCATG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76330754 885 + 90941950 atatttacagaaataaaaaattatctagcAT-CCAACaagataaaattcacaatgtctggcatccaa----tcaaaaattaccaggcatgcaaagaagcaggaaaaatacaacacataatgctgag---aaaaataaattaattacaacTCACCGAGAACTAATACATACGTTAGAATT-AGCAGATGAGGACATTAAAACATTTGTGTCCCATACGTtcaagataaa--------aaaggaaaaaaggaaaaaaatgaacatgcTAAGAAGAGACATGAGAGGTGT------GAAAAAGACCCACATTaaa-ttctagagatgaaaactata----atctgagatttaaaaaacacatacgCACCCACTGGATTGGATTA---ATGGCAGACTAGACGTTG-CAGGGaaaaaaaGGTAAGTACATTTGACGTTACCAT-ATAGAAGTTAtccaaaaagaaacagagagagggagggaaaaagaccT-----AAAA-----GAACAGTGA-GCCTTGAAAATGACATAGAATGGCTGGTTAGGATCTGCTAGATATCTGCGATAACAA-GTTTTCAAAAGTAGTATGTAAAGAA--TCTAACTCTTGGCCATCTTGAGTGGAAGGCAAAGCAGAGAGGAAGATGACTATGCTCAATATA-GCATATTTGGTATACTTGCC-ATGGGTTGCCAATCCCTAAGATTTCATTGTCACCTTC-cagttctctttctctgtcatgcTCTTTCCCCAGTTGCGGGAGTCATgcccttcttccttcctgcctgacTTCCCAGGAGGCTAGAGCTCCTATGCCATTTACCATC--------------A---TAC----------AC---ACAGGTTTCCACCTCCACTAGAACATCTATACTATAAGAGTTTCCTGTGTCCCTCAAATA---GTTTATTCCAAAATCTTCCCAATCTTCTAGCTATGTAAAGCATG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18598963 885 + 33263144 atatttacagaaataaaaaattatctagcat-ccaacaagataaaattcacaatgtctggcatccaa----tcaaaaattaccaggcatgcaaagaagcaggaaaaatacaacacataatgccgag---aaaaataaattaatcacaactcaccgagaactaatacatacgttagaatt-agcagatgaggacattaaaacatttgtgtcccatatgttcaagataaa--------aaaggaaaaaaggaaaaaaatgaacatgctaagaagagacatgagaggtgt------gaaaaagacccacattaaa-ttctagagatgacaactata----atctgagatttaaaaaacacatacgcacccactggattggatta---atggcagactagacgttg-cagggaaaaaaaggtaagtacatttgatgttaccat-atagaagctatccaaaaagaaacagagagagGGAGGGAAAAAGACCT-----AAAA-----GAACAGTGA-GCCTTGAAAATGACATAGAATGGCTGGTTAGGATCTGCTATATATCTGCGATAACAA-GTTTTCAAAAGTAGTATGTAAAGAA--TCTAACTCTTGGCCATCTTGAGTGGAAGGCAAAGCAGAGAGGAAGATGACTATGCTCAATATA-CCATATTTGGTATACTTGCC-ATGGGTTGCCAATCCCTAAGAtttcattgtcactttc-cacttctctttctctgtcaTGCTCTTTCCCCAGTTGTGGGAGTCATGCCCTTCTTCCTTCCTGCCTGATTTCCCAGGAGGCTAGAGCTCCTATGCCATTTACCGTC--------------A---TAC----------AC---ACAGGTTTCCACCTCCACTAGAACATCTATACTACAAGAGTTTCCTGTGTCCCTCAAATA---GTTTATTCCAAAATCTTCCCAATCTTCTAGCTATGTAAAGCATG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198299355 860 + 210400635 atatttacagaaataaaaaattatccagcat-ccaacaagataaaattcacaatgtctggcatccaa----tcaaaaattaccaggcatgcaaagaagcaggaaaaagacaacacataattctgag---aagaagaaatcaaacacaactcatccagaactaatgtatatgttaggatt-agcagataaagacattaaaatagctgtgttccatatgttcaagataca--------aaaagagaa-----aaaaaataaacatgctaaaaagagacatgggaggtgt------gaaaaagacccccataaaaattctagagatgaaaactata----atctgagattgaaaaaacacacaca----cactggattgaatta---atgacaaactggatgttg-caggggaaaaaaa------------gatgttaccac-acagaaattatccaaaaggaaacagagagggggaagaaaaaaagacttaaaaaaaa-----gaacagtga-gcCTTGAAAATTACATAGAATGGTTGATTAGGATGTGCTATATATCTGCG-TGACAA-GTTTTCAAAGGCAGTATGTAAAGAA--TCTAACTTTTGACCATCTTGAGTGGAAGGCAAAGGAGAGAGGAAGACGACTACACTCAATATA-CCACATTTGGTATACCTGCC-ACGGGTTGCCAATCCCTAAGATTTCATTGTCACCTTT-CACTTATCTTTCTCT--------------------------GTCATGCCCTTCTTCCTTCTTGCCTGACTTCCCAGGATGCTAGAGCTCCTATGCCATTTACCGTCATGCTACCTTTTGGA---TAC----------AC---GCAGGCTTCCACTTCCACTAAATCATCTATAATACAAGAGTTTACCGTGTCCCTCAAATAGTTGTTTATTCCAAAGTCCACCCAATCTTCTAGCCATGTAAAGCATC i calJac3.chr1 C 0 C 0 s mm10.chr15 77145557 665 + 104043685 gtatttataaaattaaaaa-----caacaacacccacaaggt-aaattcactatatctggaatctaacttttaaaaagttcacgggcatgcaaaggaacaggcaaacaCAAGCATGTCACACTGAGCCCGGATCTAGACT---CAGAACCCATCCAAGGCT-------------------AGCAG-CGAAGGCAGGCAGGCCTATACACCCC-TGTGTTTGAGATGTG--------GAG-----------AGAAAGCACAGCTCCTTA-CAGTGAGATGAGAGGCGC-------------ATCTA--------TTCTAGATGTGGAAACT-----------------------------------------GATTGGACTA-----GACAGTGTACATGATATCATAGGAAGAACTGTAA--------------AGCAT-ATGGGGG-----------GAAACGCACA---------ACCATGCACC-----CCAA-----GAATGGTGA-GCCCAGAAAATGATGAGGAAC----------GACCTGAAACATATCT----TGGCAG-TTTCTTAAAAGTACTAGACAAAAAGGCTCTAGCTCTAAGACACTTTGAATGG----------TGGGAAGGAGCTGGCTGTGC-----------------------------------------------AGCCTGTCACAGTCA------CACCCTTACCCTTCTTTCATGCCTTT---------------------CCATTCCTCTTTCCTTGCTGACTTCT--GGGAGCTGAAGGGCCTATCCTACTGAATCTC--------------AGGCTAC----------CCTGGACATGCGCAGCCTTTTACTAGAACATCTACAG----------CTCCATGGCCCTCACATA----TGTAGCAGCACATCTATCT-ATCTTCTAGCTAAGTAAAGCACC i mm10.chr15 C 0 I 1273 s canFam3.chr10 40922730 871 - 69331447 atatatatatatatatatatatatatatccg-caaacaaggtaaaaaattcattgtctagcatccaa----tcaaaaattaccaggcatgcaaacaagca-taaaaatataatccatagtgatggg---aaa----aatcaataataactgatccagaa----tacagatgttagaatt-agccgatgagaatattaaaacatttgtattccacacattcaagaaaaattgtattgaaagg---------caaaattgagcacattaa-----gacatgaaagatgaaaaaaagaaaaaggcccacatcaaa-ttccacagacaaaaactatataatgtctgagat--aaaaaacaaac---cacacattggcttggattaataatggcagattagacattt-cagaggaaaaaa--tcagcacacttggtaataccataaaagaaaccacttaaaaggaaatacacaga--gaggaagaaaGGCTA-----TAAAACAATGAACAGTGGCACCTTGGAGATGACATGGAAT----GGTCATGGTCTAATATATATCTGTATTGACAGCTTTTTCAAAAGTAGTATGCAAAGAA--TCTAACTCTTGGTCATCTTGATTAGAAGGAAA-----AGAGGGAGATGGCAGTACTGAATATATTCACGTTTAATTTATTTAACGACAGTTTGCCAAACCCTAAAATTTCACTGTCACCTTCTCACTTCTCTTT---------ACCCTTCCCACACTGGTTGGGGCCATGGTCTTCTTCCCCCTATCCTGGCTTCCCTGGAGACTGGAGCTCC-ATGTCACTTACCTGC--------------A---TGCTGTCTTCTGGAT---ACATGCTGC--CTTCCACTGGAACATCTATA-----AAGGATCTGTGTATTCCCTAAATAGCTGTTTATTCTTAAACCTTCCTTA-CTTCTAGCCAAATAAAGCATC i canFam3.chr10 I 106 C 0 a score=1356976.000000 s hg38.chr22_KI270876v1_alt 151025 406 + 263666 TATTTCCCAAACTACA--TGTGTGCTAAGTATTAACTGATTTAAGTAATAAGCATTAGGTTACAAGTGACTACCCAATTTAACTCTCCCATTCAACATTTCAAAAGAGGACACTATCAATGAATTAGCAAGTTAAAAATCATTAATTAACTCAAAAGAAAT-ATTTGCTGGAT-----------------------GCTGACAC------------------------TGGTgatatagtcccaatcctgaaagaaactatagtctgatgg---aaaaacacag--aaatatactcacaattatagtacc-----atataagctaaacgaacaatgcatacagaatgttaatgaagcac---agagggacaactgtgtgagacagg--aagatttctgaagtaggtgaagtctaagctgaacctttaaa--gacaaatt-----aatcatgtg-ggagaaAAATGCA-TCTGGCCCAAAG s panTro4.chr22 34528470 406 + 49737984 TATTTCCCAAACTACA--TGTGTGCTAAGTATTAACTGATTTAAGTAATAAGCATTAGGTTACAAGTGACTACCCAATTTAACTCTCCCATTCAACATTTCAAAAGAGGACACTATCAATGAATTAGCAAGTTAAAAATCATTAATTAACTCAAAAGAAAT-ATTTGCTGGAT-----------------------GCTGACAC------------------------TGGTgatatagccccaatcctgaaagaaactatagtctgacgg---aaaaacacag--aaatatactcacaattacagtacc-----atataagctaaaagaacaatgcatatagaatgttaatgaagcac---agagggacaactgtgtgagacagg--aagatttccgaagtaggtgaagtctaagctgaacctttaaa--gacaaatt-----aatcatgtg-ggagaaAAATGCA-TCTGGCCCAAAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30942820 407 + 46535552 TATTTCCCAAACTACA--TGTGTGCTAAGTATTAACTGATTTAAGTAATAAACATTAGGTTATAAGTGACTGCCCAATTTAACTCTCCCATTCAACATTTCAAAAGAGGACACTATCAATGAATTAGCAAGTTAAAAATCATTAATTAACTCAAAAGAAAT-ATTTGCTGGAT-----------------------GCTAACAC------------------------TGGTgatatagtcccaatcctgaaagaaactatagtctgacgg---aaaaacacag--aaatacactcacaattacagtact-----gtataagctaaaagaacaatgcatatagaacgttaatgaaacac---agagggacaactctgtgagacagg--aagatttctgaagtaggtgaagtctaagctgaatctttaaa--gacaaatt-----aatcatgtg-ggagaaaaatgcattctggcccaaag i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100494680 408 - 115148730 TATTTCCCAAACTACA--TGTGTGTTAAGTATTAACTGATTTAAGTAATAAGCACTACCTTATAAGTGACTACCCAATTTAACTCTCCCATTCAACATTTCAAAAGAGGACACGATCAATGAATTAGCAAGTTAAAAATCATTAATTAACTCAAAAGAAATAATTtgctggat-----------------------gctaacac------------------------tagtgatatagtcccaatcctgaaagaaactatagtctgatgg---aaaaacacag--aaatgtactcacaattacagtacc-----gtataagctaaaagaacaatgcatatagaatgttaatgaggcac---agagggacaactctgtgagacagg--aagatttctgaagtaggtgagggctaagcagaatctttaag--gacaaatt-----aatcatgtg-ggagaaaaatgcattctggcccaaag i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80648134 406 + 95678458 TATTTCCCAAACTACA--TGTGTGTTAAGTATTAACTGATTTAAATAATAAGCATTAGGTTATAAGTGACTACCCAATTTAACTCTCCCATTCAACATTTCAAAAGAGGACACTATCAATGAATTAGCAAGTTAAAAATCATTAATTAACTCAAAAG-AAt-atttgccagat-----------------------gctaacac------------------------tggtgatatagtcccaatcctgaaagaaactgtagtctgatgg---aaaaaaacag--aaatacactcgcaattacagtact-----gtataagctataagaacaatgcatatagaatgctactgaagcac---agagggacaactctgtgagacaga--aagatttctgaagtaggtgaagtctaagctgaatctttaaa--gacaaatt-----aatcacgtg-ggagaaaaatgcattctggcccaaag i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81074471 406 - 96509753 TATTTCCCAAACTACA--TGTgtgttaagtattaactgatttaaataataagcattaggttataagtGACTACCCAATTTAACTCTCCCATTCAACATTTCAAAAGAGGACACTATCAATGAATTAGCAAGTTAAAAATCATTAATTAACTCAAAAG-AAT-ATTTGCCGGAT-----------------------GCTAACAC------------------------TGGTgatatagtcccaatcctgaaagaaactgtagtctgatgg---aaaaaaacag--aaatacactcgcaattacagtact-----gtataagctataagaacaatgcatatagaatgctactgaagcac---agagggacaactctgtgagataga--aagatttctgaagtaggtgaagtctaagctgaatctttaaa--gacaaatt-----aatcacgtg-ggagaaaaatgcattctggcccaaag i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76331639 406 + 90941950 TATTTCCCAAACTACA--TGTGTGTTAAGTATTAACTGGTTTAAATAATAAGCATTAAGTTATAAGTGACTACCCAATTTAACTCTCCCATTCAACATTTCAAAAGAGGACACTATCAATGAATTAGCAAGTTAAAAATCATTAATTAACTCAAAAG-AAT-ATTTGCCAGAT-----------------------GCTAACAC------------------------TGGTGATATAGTCCCAATCCTGAAAGAAACTGTAGTCtgatgg---aaaaaaacag--aaatacactCACAATTACAGTACT-----GTATAAGCTATAAGAAAAATGCATATAGAATGCTAATGAAGCAC---AGAGGGACAACTCTGTGAGATAGA--AAGATTTCTGAAGTAGGTGAAGTCTAAGCTGAATCTTTAAA--GACAAATT-----AATCACGTG-GGAGAAAAATGCATTCTGGCCCAAAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18599848 404 + 33263144 TATTTCCCAAACTACA--TGTGTGTTAAGTATTAACTGATTTAAATAATAAGCATTAGGTTATAAGTGACTACCCAATTTAACTCTCCCATTCAACATTTC--AAGAGGACACTATCAATGAATTAGCAAGTTAAAAATCATTAATTAACTCAAAAG-AAT-ATTTGCTGGAT-----------------------GCTAACAC------------------------TGGTgatatagtcccaatcctgaaagaaactgtagtctgatgg---aaaaaaacag--aaatacactcacaattacagtact-----gtataagctataagaacaatgcatatagaatgctaatgaagcac---agagggacaactctgtgagacaga--aagatttctgaagtaggtgaagtctaagctgaatctttaaa--gacaaatt-----aatcatgtg-ggagaaaaatgcattctggcccaaag i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198300215 434 + 210400635 TATTTCTGAAACTACA--TATGTGTTAAGTATTAAATGATTTAAATAATAAGCATTAGGTTATAAGTGACTACCCATTTTAATTTTCTCATTCTACATTTCAAAAGAAGACACTATCAATGAATTAGCAAGTTAAAAATCattaattaactcaaga--aat-atttgctggat-----------------------gctaacactaaacaagttatgttaataaaccttggtaatacagttccaatcctgaaag-aattacagtctgatga---aaaaaaacag--aaatatactcacagttacagtaca-----gtataagctaaaagaacaatgcatatagaacgctaatgaagcac---agagggacaactctgtgaaacagg--aaagattgtaaactaggtggagtctaagctgaatcattaaa--gacaaatttaaagatttaaatgtggaaaaaAATGCATTCTGGCCCAAAG i calJac3.chr1 C 0 C 0 s canFam3.chr10 40923601 441 - 69331447 CATTTCTAAAATGACATTTATATTTTAGGTATTAACTGATTTAATAAATAAGCACTAGGATGTATGTGATTACTCAATTTAACT----CATTTTTCATTTCAAAAGAGAACCCTGTCAATTAATTAACAAGTTAAAATCCACTAATTCAATCACAAG--GT-ATTTACTAGGTAACAAATTGAACCAGATAGGATAATGAACAC------------------------TGGCAGTATAGTCACAATTcttaaagaaact--agtctgagggggaaaaaaaacagataaatacactcacagctacaatactggatagtatgggctaagagagcagcacatacacaacaccaatgaagcaccaaaagaggacaaccctatgagacagggcaagctttttgaaagaggccaagtctaagctgaacttttaagttaagaaact-----aaccatgct-ggagacaaaggtattctagctcaaag i canFam3.chr10 C 0 C 0 e mm10.chr15 77146222 1273 + 104043685 I a score=1029143.000000 s hg38.chr22_KI270876v1_alt 151431 363 + 263666 TAATAAATAATagtcatgtatcacttgatgacagggatatgttctgagaaacgtgtccttaagcaa--gtgtctttgtgtgaacatcacacagtgtacttacacaaatttagatggtattgcctactacacacctagactatatggcatcgcctattgctcctaggctacaaacttgtacagcatgtgact-------atactgaatactgtaggcaagcataacacaaacctaagtatttgtgtgtctaaatatagaaaagggacagtaaaaatacagtattataatcttatggaaccactattgtgtatgcagtctgtcgttgacccaaatgttgttatacagtatataact-ACATGAAAAATG---TTTTTA s panTro4.chr22 34528876 362 + 49737984 TAATAAATAATagtcatgtgtcacttgatgacagggatatgttctgagaaacgtgtccttaagcaa--gtgtctttgtgtgaacatcacacagtgtacttacacaaatttagatggtattgcctactacacacctagactatatggcatcgcctattgctcttaggctacaaacttgtacagcatgtgact-------atactgaatactgtaggcaagcataacacaaacctaagtatttgtgtgtctaaatatagaaaagggacagtaaaaatacagtattataatcttatggaaccactattgtgtatgcagtctgtcgttgacccaaatgttgttatacagtatataa-T-ACATGAAAAATG---TTTTTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30943227 362 + 46535552 taataaataatagtcatgtgtcacttgatgacagggatatgttctgagaaacatgtccttaagcaa--gtgtctttgtgtgaacatcacacagtgtacttacacaaatttagatggtattgcctactacacacctagactatatggcatagcctattgctcctaggctacaaacttgtacagcatgtgact-------atactgaatactgtaggcaagcgtaacacaaacctaagtatttgtgtgtctaaatatagaaaagggacagtaaaaatacagtattataatcttatggaaccactattgtgtatgcagtctgtcattgacccaaatgttgttttatagtatataact-acatgaaaaatg----tttta i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100495088 360 - 115148730 taaaaaacaatagtcatatgtcacttgatgacaaggatatgt--tgagaaacgtgtccttaagcaa--gtgtctttgtgtgaacatcacacagtgtacttacacaaatttagatggtattgcctactacacacctagactatatggcatagcctattgctcctaggctacaaacttgtacagcatgtgact-------atactgaatactgtaggcaagcgtaacacaaacctaagtatttgtgtgtctaaatatagaaaagggacagtaaaaatacagtactataatcttacggaatcactattgtgtatgcagtctgtcgttgacccaaatgttgttatatagtatataact-acatgaaaaatg----tttta i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80648540 368 + 95678458 taataAATAATagtcatgtgtcacttgatgacagggatatgttctgagaaatgtgtccttaagcaattgtgtctttctttgaacatcacacagtgtacttacacaaatttagatggtattgcctactacacgactagactatatggcgtagcctattgctcctaggccacaaatttgtagagcatgtgact-------atactgaatactgtaggcaagtataacccaaacctaagtatgtgtgtatctcaatatagaaaagggacagtgaaaatagagtattataatcttatggaaccattattgtgtaggcagtctgtcactgacccaaatgttgttatatagctgataactAACATGAAAAATGTA-TTTTTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81074877 368 - 96509753 taataAATAATagtcatgtgtcacttgatgacagggatatgttctgagaaatgtgtccttaagcaagtgtgtctttgtgtgaacatcacacagtgtacttacacaaatttagatggtattgcctactacacgactagactatatggcgtagcctattgctcctaggccacaaatttgtagagcatgtgact-------atactgaatactgtaggcaagtataacccaaacctaagtatgtgtgtatctcaatatagaaaagggacagtgaaaatagagtattataatcttatggaaccattattgtgtaggcagtctgtcactgacccaaatgttgttatatagctgataactAACATGAAAAATGTA-TTTTTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76332045 376 + 90941950 TAATAAATAATAGTCATGTGTCACTTgatgacagggatatgttctgagaaatgtgtccttaaGCAAGTGTgtctttgtgtgaacatcacacagtgtacttacacaaatttaGATGGTATTGCCTACTACACAACTAGACTATATGgcgtagcctattgctcctaggccacaaatttgtacagcatgtgactatactgaatactgaatactgtaggcaagtATAACCCAAACCTAAGTATGTGTGTATCTCAATATAGAAAAGGGACAGTGAAAATggagtattataatcttatggaaccattATTGTGTAGGCAGTCTGTCACTGACCCAAATGTTGTTATATAGCTGATAACTaacatgaaaaatgtattttttt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18600252 361 + 33263144 taataAATAATagtcatgtgtcacttgatgacagggatatgttctgagaaatgtgtccttaagcaagtgtgtctttgtgtgaacatcacacagtgtacttacacaaatttagatggtattgcctactacacaactagactatatggcgtagcctattactcctaggccacaaatttgtacagcatgtgact-------atactgaatactgtaggcaagtataacccaaacctaagtatgtgtgtatctcaatatagaaaagggacagtgaaa-------attataatattatggaaccattattgtgtaggcagtctgtcactgacccaaatgttgttacatagctgataactAACATGAAAAATGTA-TTTTTT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198300649 355 + 210400635 TAATAAATAATagtcatgtgtcacttgatgacaggaatatgttctgagaaatgtgtccttaggcaagcttgtctttgtgtgaacatcacacagtgttcctacacaaatttaaatggtattgcctactatacacctagaatatatgga-------attgctcctagactacaaatttacacagcatgtgact-------atactgaatactgtaggcaaacataacagaaacctaagtatttgtgtatctaaatatagcaaagggatagtaaaaatatagtattataatcttatgggaccactgctgtgtatgca----gttgttgacccaaatgttgttatacaacatataact-ACATGCaaaatata--ttttt i calJac3.chr1 C 0 C 0 e mm10.chr15 77146222 1273 + 104043685 I e canFam3.chr10 40924042 0 - 69331447 C a score=1176760.000000 s hg38.chr22_KI270876v1_alt 151794 361 + 263666 AAAAAATATGAAAATGTATATGAAAAGCAATAAGGTATAAAAT-ACAGCATATGGAGGGAGAA-----------------AGGAAGTAAAGA-AGGAGAAGAATCTTCATATTTTCTGGGGCTGGGGAAATAAGAGAGCAAATCAGGGGATTCATTCTATTATAAAAGGGATCCATCATGACCTGCTAGAACCACTCAAAACTGTCTC------TCTGTCATGAAGCTATATGGGAAAACCTTACGTATGCTATAAAGGAAATTGCGAGGTCCTGTATCCCTCTGAGTcagggatcagcaaa--ctatagcttgtggttcaaagccagccctccacctacttttgcataacctgcaagctaagcatggtttt-acgtttttaaatagtt s panTro4.chr22 34529238 361 + 49737984 AAAAAATATGAAAATGTATATGAAAAGCAATAAGGTATAAAAT-ACAGCATATGGAGGGAGAA-----------------AGGAAGTAAAGA-AGGAGAAGAATCTTCATATTTTCTGGGGCTGGGGAAATAAGAGAGCAAATCAGGGGATTCATTCTATTATAATAGGGATCCATCATGACCTGCCAGAACCACTCAAAACTGTCTC------TCTGTCATGAAGCTATATGGGAAAACCTTACCTATGCTATAAAGGAAATTGCGAGGTCCTGTATCCCTCTGAGTcagggatcagcaaa--ctatagcttgtggttcaaagccagccctccacctacttttgtataacctgcgagctaagcatggtttt-acgtttttaaatagtt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30943589 361 + 46535552 aaaaaatatgaaaatgtatatgaaaagcaataaggtataaaat-acagcatatggagggagaa-----------------aggaagtaaaga-aggagaagAATCTTCATATTTTCTAGGGTTGGGGAAATAAGAGAGCAAATCAGGGGATTCATTCTATTATAATAGGGATCCATGATGACCTGCCAGAACCACTCAAAACTGTCTC------TCTGTCATGAAGCTATATGGGAAAACCTTACCCATGCTATAAAGGAAATTGCGAGGTCCTGTATCCCTCTGAGTcagggatcagcaaa--ctacagcttgtggttcaaagccagccctccacctacttttgtaaaacctgcaagctaagcatggtttt-acgtttttaaatagtt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100495448 361 - 115148730 aaaaaatatgaaaatgtatatgaaaagcaataaggtataaaat-acagcatatggagggagaa-----------------aggaagtacaga-aggagaagaatctTCATATTTTCTGGGGCTGGGGAAATAAGAGAGCAAATCAGGGGATTCATTCTATTATAATAGGGATCCATGATGACCTGCCAGAACCACTCAAAACTGTCTC------TCTGTCGTGAAGCTATATGGGAAAACCTTACCTATGCTATAAAGGAAATTGTGAGGTCCTGTATCCCTCTAAGTcagggatcagcaaa--ctatagcttgtggttcaaagccagccctccgcctacttttgtataacctgcaagctaagcatggtttt-acgtttttaaatagtt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80648908 358 + 95678458 TTAAAATATGAAAATGTATACAAAAAGCAAGAAGGTATAAAAT-ACAGCATATAGATGGAGAA-----------------AGGAAGTAAAGA----AGAAGAATCTTCGTATTTTCTGGGGCTGGGGAAATAAGAGAGCAAATCAGGGGATTCATTCTATTGTAATAGGGATCCATGATGACCTGCCAGAACCACTCAAAACTGTCTC------TCTGTCATGAAGCTATACGGGAAAACTTTACCTACGCTATAAAGGAAATTGCGAGGTCCTGTATCCCTCTAAGTcagggatcagcaaa--ctatagcttgtggttcaaagccagccctccacctacttttatataacctgcaacttaagcatgctttt-acgtttttaaatagtt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81075245 358 - 96509753 TAAAAATATGAAAATGTATACAAAAAGCAAGAAGGTATAAAAT-ACAGCATATAGATGGAGAA-----------------AGGAAGTAAAGA----AGAAGAATCTTCGTATTTTCTGGGGCTGGGGAAATAAGAGAGCAAATCAGGGGATTCATTCTATTGTAATAGGGATCCATGATGACCTGCCAGAACCACTCAAAACTGTCTC------TCTGTCATGAAGCTATACGGGAAAACTTTACCTACGCTATAAAGGAAATTGCGAGGTCCTGTATCCCTCTAAGTcagggatcagcaaa--ctatagcttgtggttcaaagccagccctccacctacttttatataacctgcaacttaagcatgctttt-acgtttttaaatagtt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76332421 358 + 90941950 tttaaatatgaaaatgtatacaaaaagCAAGAAGGTATAAAAT-ACAGCATATAGATGgagaa-----------------aggaagtaaaga----agaaGAATCTTCGTATTTTCTGGGGCTGGGGAAATAAGAGAGCAAATCAGGGGATTCATTCTATTGTAACAGGGATCCATGATGACCTGCCAGAACCACTCAAAACTGTCTC------TCTGTCATGAAGCTATACGGGAAAACTTTACCTACGCTATAAAGGAAATTGCGAGGTCCTGTATCCCTCTAAgtcagggatcagcaaa--ctataGCTTGTGGTTCAAAGCCAGCCCTCCACCTACTTTTATATAACCTGCAACTTAAGcatgctttt-atgtttttaaatagtt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18600613 358 + 33263144 TAAAAATATGAAAATGTATACAAAAAGCAAGAAGGTATAAAAT-ACAGCATATAGATGGAGAA-----------------AGGAAGTAAAGA----AGAAGAATCTTCGTATTTTCTGGGGCTCGGGAAATAAGAGAGCAAATCAGGGGATTCATTCTATTGTAACAGGGATCCACGATGACCTGCCAGAACCACTCAAAACTGTCTC------TCTGTCATGAAGCTATACGGGAAAACTTGACCTACGCTACAAAGGAAATTGCGAGGTCCTGTATCCCTCTAAGTcagggatcagcaaa--ctatagcttgtggttcaaagccagtcctccacctacttttgtataacctgcaacttaagcatgctttt-acgtttttaaatagtt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198301004 362 + 210400635 ttaaaatatgaaaatatatataaaaaGCAAGAAGGTCTAAAAT-ACGGCATATGGAGGGAGAA-----------------AGGAAGTAAAGGAAGGAGAAAAAACTTCCTATTTTCTGGGGCTGGGGAAATGAGAGAGCAAATCAGGGGATTCATTCTATTATAACAGGGATTCAAGATGACCTGCTAGAACCACTCAAAACTTTGTT------TCTGTCATGAAGCTATATAGGAAAACCTTACCTATGCTATAAATGAAATTGTGAGGTCCTGTATCCCTCTAAGAACgggatcagcaaa--ctatagctcatggttcaaagccagccctccagctacttttgtataacctgcaagctaagcagggtttt-acatttttaaacagtt i calJac3.chr1 C 0 C 0 s canFam3.chr10 40924042 358 - 69331447 aaacagtatgcaaaaaaacatgaaaaataggaaggtgtaagataatggcacatttgaggaccacaaatggctcagattttggggtgtaatga-aagggaaaa---------------gggg---ggaaaatgagAGAGTATGTCAAGGGTTTCACTC-----TAACAGGGATCCAAAATGACATGTCAAAACTGCTAGGAACTGTGTCCCTGATCCTGCCATCAAGCTCTGTGAGAAAACTTTCCCT---CTATTAGAAAAGTAGGGAGGACCCGCATCTCTCTAAGTcagggtttggcaaagggtttggctt-tggtctaaag---gctgtccaacactttttgtacaatctaaatgccaagcatggttttcacatttttaaacagct i canFam3.chr10 C 0 C 0 e mm10.chr15 77146222 1273 + 104043685 I a score=641367.000000 s hg38.chr22_KI270876v1_alt 152155 278 + 263666 --aagaggccaggcacggtggcttacgcctgtaatcccagcactttgggaggccgaggtgggcagatcacaaggtcaggagatcgagaccatcctggctaacatggtgaaatcctgtctctactaaaattacaaaaaattagccaggcatggtggcaggcacctg----------cccttgggaggctgaggcaggagaatggcgtgaacccaggaggcagagctggcagtgatccgagatcgcaccactgcactccagcctgggtgatagtgagagactctgtctcaaa s panTro4.chr22 34529599 278 + 49737984 --aaGAggccaggcacggtggcttacgcctgtaatcccagcactttgggaggccgaggtgggcagatcacaaggtcaggagatcgagaccatcctggctaacatggtgaaatcctgtctttactaaaattacaaaaaattagccaggcatggtggcaggcacctg----------cccttgggaggctgaggcaggagaatggcgtgaacccaggaggcagagctggcagtgagccgagatcgcaccactgcactccagcctgggtgatagtgagagactctgtctcaaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30943950 280 + 46535552 aaaagaggccgggcacggtggctcacacctgtaatcccagcactttgggaggccgaggtgggcagatcacaaggtcaggagatcgagaccatcctggctaacatggtgaaatcctgtctctactaaaattacaaaaaattagccaggcatggtggcaggcacctg----------cccttgggaggctgaggcgggagaatggcgtgaacccaggaggcggagcttgcagtgagccgagatcgcaccactgcactccagcctgggtgacagtgagagactctgtctcaaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100495809 279 - 115148730 aaaagaggccgggcacggtggctcacgcctgt-atccctgcactttgggaggctgaggtgggcggatcacaaggtcaggagatcgagaccatcctggctaacatggtgaaatcctgtctctactaaaattacaaaacattagccaggcatggtggcaggcacctg----------cacttcggaggctgaggcaggagaacggtgtgaacccaggaggcggagcttgcagtgagccgagatcgcaccactgcactccagcctgggtgacagtgcgagactctgtctcaaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80649266 285 + 95678458 aaaagaggctaggcgcagcagctcacgcctgtaatcgcagcactttgggaggccgaggtgggcggatcacaaggtcaggagattgagaccatcctggttaacatggtgaaatcctgtctcacctaaaaatacaaaaaattagccagccatggtggcgggcacctgtagtcccagacactcaggaggctgaggc---agaatggcgtgaacccgggaggcggaacttgcagtgagccgagattgcaccactgcactccagcctggaggatagtgtgcga--ctgtctcaaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81075603 285 - 96509753 aaaagaggctaggcgcagcagctcacgcctgtaatcccagcactttgggaggccgaggtgggcggatcacaaggtcaggagattgagaccatcctggttaacatggtgaaatcctgtctctcctaaaaatacaaaaaattagccagccatggtggtgggcacctgtagtcccagacactcaggaggctgaggc---agaatggcgtgaacccgggaggcggaacttgcagtgagccgagatcgcaccactgcactccagcctggaggatagtgtgaga--ctgtctcaaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76332779 287 + 90941950 aaaagaggccaggcgcggcagctcacgcctgtaatcccagcactttgggaggccgaggtgggcggatcacaaggtcaggagattgagaccatcctggttaacatggtgaaatcctgtctctcctaaaaatacaaaaaattagccagccatggtggcaggcacctgtagtctcagacactcaggaggctgaggc---agaatggcgtgaacccgggaggcggaacttgcagtgagccgagatcgcaccactgcactccagcctggaggacagtgtgagactctgtctcaaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18600971 290 + 33263144 aaaagaggccaggcgcggcagctcacgcctgtaatcccagcactttgggaggccgaggtgggcggatcacaaggtcaggagatggagaccatcctggttaacatggtgaaatcctgtctctcctaaaaatacaaaaaattagccagccatggtggcgggcacctgtcgtcccagacactcaggaggctgaggcaggagaatggcgtgaacccggcaggtggaacttgcagtgaaccgagatcgcaccactgcactccagcctggaggatagtgtgagactctgtctcaaa i chlSab2.chr19 C 0 C 0 e mm10.chr15 77146222 1273 + 104043685 I e canFam3.chr10 40924400 0 - 69331447 C e calJac3.chr1 198301366 0 + 210400635 C a score=-1684.000000 s hg38.chr22_KI270876v1_alt 152433 7 + 263666 ---aaaaaaa s panTro4.chr22 34529877 7 + 49737984 ---aaaaaaa i panTro4.chr22 C 0 I 457 s ponAbe2.chr22 30944230 7 + 46535552 ---aaaaaaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100496088 5 - 115148730 ---aaaaa-- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80649551 4 + 95678458 ---aata--- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81075888 4 - 96509753 ---aata--- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76333066 4 + 90941950 ---aata--- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18601261 4 + 33263144 ---aata--- i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40924400 7 - 69331447 aaaaaaa--- i canFam3.chr10 C 0 C 0 e mm10.chr15 77146222 1273 + 104043685 I e calJac3.chr1 198301366 0 + 210400635 C a score=-1387.000000 s hg38.chr22_KI270876v1_alt 152440 7 + 263666 taataat s ponAbe2.chr22 30944237 6 + 46535552 aaaaaa- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100496093 6 - 115148730 aaaaaa- i nomLeu3.chr7b C 0 C 0 s canFam3.chr10 40924407 1 - 69331447 ------t i canFam3.chr10 C 0 C 0 e mm10.chr15 77146222 1273 + 104043685 I e calJac3.chr1 198301366 0 + 210400635 C e rheMac3.chr10 80649555 0 + 95678458 C e panTro4.chr22 34529884 457 + 49737984 I e papAnu2.chr10 76333070 0 + 90941950 C e macFas5.chr10 81075892 0 - 96509753 C e chlSab2.chr19 18601265 0 + 33263144 C a score=33492.000000 s hg38.chr22_KI270876v1_alt 152447 17 + 263666 aaattaaaaataaagtt s panTro4.chr22 34530341 17 + 49737984 aaaTTAATAATAAAGTT i panTro4.chr22 I 457 C 0 s ponAbe2.chr22 30944243 15 + 46535552 --attaaaaataaagtt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100496099 17 - 115148730 aaattaaaaataaagtt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80649555 17 + 95678458 aaaataaaaataaagtt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81075892 17 - 96509753 aaaataaaaataaagtt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76333070 17 + 90941950 aaaataaaaataaagtt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18601265 17 + 33263144 aaaataaaaataaagtt i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40924408 2 - 69331447 ---------------tc i canFam3.chr10 C 0 C 0 e mm10.chr15 77146222 1273 + 104043685 I e calJac3.chr1 198301366 0 + 210400635 C a score=9411.000000 s hg38.chr22_KI270876v1_alt 152464 3 + 263666 aaa s panTro4.chr22 34530358 3 + 49737984 aaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30944258 3 + 46535552 aaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100496116 3 - 115148730 aaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80649572 3 + 95678458 gaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81075909 3 - 96509753 gaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76333087 3 + 90941950 gaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18601282 3 + 33263144 gaa i chlSab2.chr19 C 0 C 0 s mm10.chr15 77147495 3 + 104043685 aaa i mm10.chr15 I 1273 C 0 s canFam3.chr10 40924410 3 - 69331447 aaa i canFam3.chr10 C 0 C 0 e calJac3.chr1 198301366 0 + 210400635 C a score=1148710.000000 s hg38.chr22_KI270876v1_alt 152467 306 + 263666 agaatcatattttgtgacacatacatattacatggaacttaaatttcagtgtccgtaaat--agttttactggaacacagctacaaccaacgattcatttacttatcatctatagcttcttcaatgcttcatcagcacagccgggtagttgtgacagaaacaacatggcttgcaaagccaaaattgtttactatctggccctttacagaaaaagttcgtggatctttgCTCTCAGTTAAGAGTCTTTTCAAAACCCAATCTCCTTCACTTAAGTCCCAGTTTGTCTCTTCCAAACTTCTTATGAGGAA s panTro4.chr22 34530361 306 + 49737984 agaatcatattttgtgacacatacatattacatggaacttaaatttcagtgtccgtaaat--agttttactggaacacagctacaaccaacgattcatttacttatcatctatagcttcttcaatgcttcatcagcacagccgggtagttgtgacagaaacaacatggcttgcaaagccaaaattgtttactatctggccctttacagaaaaagttcgtggatctttgCTCTCAGTTAAGAGTCTTTTCAAAACCCAATCTCCTTCACTTAAGTCCCAGTTTGTCTCTTCCAAACTTCTTACGAGGAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30944261 306 + 46535552 agaatcatattttgtgacacatacacattacatggaacttaaatttcagtgtccataaat--agttttaccggaacacagctacaaccaacgattcatttacttatcatctatagcttcttcaatgcttcatcagcacagccgggtagttgtgacagaaacaacatggcttgcaaagccaaaattgtttactatctggccctttacagaaaaagttcatggatctttgTTCTCAGTTAAGAGTCTTTTCAAAACCCAATCTCCTTCACTTAAGTCCCAGTTTGTCTCTTCCAAACTTCTTACGAGGAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100496119 306 - 115148730 agaagcatattttgtgacacatacacattagatggaacttaaatttcagtgtccataaat--agttttactggaacacagctacaaccaaccattcatttacttatcatctatagcttcttcaatgcttcatcagcaaagccaggtagttgtgacagaaacaacatggcttgcaaagccaaaattgtttactatctggccctttacagaaaaagttcgtggatctttgCTCTCAGTTAAGAGTCTTTTCAAAACCCAATCTCCTTCACTTGAGTCCCAGTTTGCCTCTTCCAAACTTCTTACGAGGAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80649575 306 + 95678458 agaatcatattttgtgacacataaacattacatggaatttaaatttcagtgtccataaat--agttttactggaacacagctataactaaccattcatttacttaccatctatagcttcttcagtgcttcatcagcaaagctgggtagttgtgatagaaacaacacagcttgcaaagccaaaattgtttactatctggccctttacagaaaaagttcatggatctttgCTCTAAGTTAAGAGTCTTTTCAAAACCCAATCTCCTTCACTTAAGTCCCAGTTTGTCTCTTCCAAACTTCTTACAAGGAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81075912 306 - 96509753 agaatcatattttgtgacacataaacattacatggaatttaaatttcagtgtccataaat--agttttactggaacacagctataactaaccattcatttacttaccatctatagcttcttcagtgcttcatcagcaaagctgggtagttgtgatagaaacaacacggcttgcaaagccaaaattgtttactatctggccctttacagaaaaagttcatggatctttgCTCTAAGTTAAGAGTCTTTTCAAAACCCAATCTCCTTCACTTAAGTCCCAGTTTGTCTCTTCCAAACTTCTTACAAGGAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76333090 306 + 90941950 agaaTCATATTTTGTGACACATAAACATTACATggaatttaaatttcagtgtccataaat--agttttactggaacacagctaTAACTAACCATTCATTTACTTACCATCTATAGCTTCTTCAGTGCTTCATCAGCAAAGCCGGGTAGTTGTGATAGAAACAACACGGCTTGCAAAGCCAAAAttgtttactatctggccctttacagaaaaagttcaTGGATCTTTGCTCTAAGTTAAGAGTCTTTTCAAAACCCAATCTCCTTCACTTAAGTCCCAGTTTGTCTCTTCCAAACTTCTTACAAGGAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18601285 306 + 33263144 agagtcatattttgtgacacataaacattacatggaatttaaatttcagtgtccataaat--agttttactggaacacagctataactaaccattcatttacttatcatctatagcttcttcagtgcttcatcagcaaagccgggtagttgtgatagaaacaacacggcttgcaaagccaaaattgtttactatctggccctttccagaaaaagtttatggatctttgCTCTAAGTTAAGAGTCTTTTCAAAACCCAATCTCCTTCACTTAAGTCCCAGTTTGTCTCTTCCAAACTTCTTACAAGGAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198301366 304 + 210400635 agaatcacattttgtgacacataaacattacatggaattaaaatttgcgtgtccataaat--agttttactggaacacagctacaacccaccattcgtttacttactgtctatagcttattcaatgcctcatcagcaaagctgggtagttgggatagaaacaacatggcttacaaagcccaaattgtttactacttggcccttt--agacaaagtctgtggatcTTTCCTCTAAGTTAAGAATCTTTTCAAAATCCAATCTCCTTCACTTAAGTCTCAGTTTGTCTCTTCAAAACTTCTTACAAGAAA i calJac3.chr1 C 0 C 0 s mm10.chr15 77147498 261 + 104043685 ggaataacattttgca--acatgaaagtgacatgaaattccaatcttattgtccatca----agtattatt-gaaca----tata------cattcattcaagtattgtctatggtttcctcagtgctttagtaactgagcagg----------taaacacagagaggcctgtaaagcaaaaaatgattattactaaaca--tgccaggaaaagcttTTGG-------------GTCAA-----CTTTCAAAATCTAATCTCCTTTGCTTAAGTATCAGAGTGTCTCTCTACAATGCCTTACAAGGAA i mm10.chr15 C 0 I 966 s canFam3.chr10 40924413 286 - 69331447 agaagattattttgtgacacatggaaattctatgaaattcaaatttcagtgtccataaataaagttttactggaacacggccaca------cattcatttatgtatcgtctaggacttctttcatgtttcaacagcagagctgaatagttgtgacagaaacagcatggactacaaaaccaaaaatatttactattgagccattagcag--aaagtttgtagattcT--------------GATCTTTCAAAAATCTCATCTCCTTCACTTATGTCTCAGTTTGTCTCTTCAGAACTTTTTACAAGGAA i canFam3.chr10 C 0 I 2 a score=293353.000000 s hg38.chr22_KI270876v1_alt 152773 83 + 263666 TCATAATTAACATTAGGAAAAAAGAATACAGTTGTATCATTTGTGGACATAAAAGCATTCATTTATAATTTCATAAAATAATT s panTro4.chr22 34530667 83 + 49737984 TCATAATTAACATTAGGAAAAAAGAATACAGTTGTATCATTTGTGGACAGAAAAGCATTCATTTATAATTTCATAAAATAATT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30944567 83 + 46535552 TCATAATTGACATTAGGAAAAAAGAATATAGTTGTATGATTTGTGGACATAAAGGCattcatttataatttcataaaataatt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100496425 83 - 115148730 TCATAATTAACATTAGGAAAAAAGAATATAGTTGTATCATTTGTGGACATAAAAGCattcatttataatttcataaaataatt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80649881 83 + 95678458 TCATAATTAACATTAGGAAAAAAGAATACAGTTGTATCATTTGTGGACATAAAAGCATTCATTTATAATATCGTAAAATAATC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81076218 83 - 96509753 TCATAATTAACATTAGGAAAAAAGAATACAGTTGTATCATTTGTGGACATAAAAGCATTCATTTATAATATCGTAAAATAATC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76333396 82 + 90941950 TCATAATTAACATTAGGAAAAAAGAATACAGTTGTATCATTTGTGGAcataaaa-cattcatttataaTATCGTAAAATAATC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18601591 83 + 33263144 TCATAATTAACATTAGGAAAAAAGAATACAGTTGTATCATTTGTGGACATAAAAGCATTCATTTATAATATTGTAAAATAATC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198301670 82 + 210400635 TCATAATTAGCATTAGG-AAAAAGAATATAGTTGTATCATTTGTGGACATAAAAGCATTCATTTATAATTTCATAAAATAATT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40924701 82 - 69331447 TCATAATCAGTATT-GGATAAAAGAATATAGTTCTGTTATTTATGGATAGAAAAGCattattttataatttcataaaataatt i canFam3.chr10 I 2 I 590 e mm10.chr15 77147759 966 + 104043685 I a score=48410.000000 s hg38.chr22_KI270876v1_alt 152856 15 + 263666 ATTGACTTCCATTAC s panTro4.chr22 34530750 15 + 49737984 ATTGACTTCCATTAC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30944650 15 + 46535552 attgacttccattac i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100496508 15 - 115148730 attgacttccattac i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80649964 15 + 95678458 ACTGACTTCCATTAC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81076301 15 - 96509753 ACTGACTTCCATTAC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76333478 15 + 90941950 ACTGACTTCCATTAC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18601674 15 + 33263144 ACTGACTTCCATTAC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198301752 15 + 210400635 ACTGACTTCCATTAC i calJac3.chr1 C 0 C 0 e mm10.chr15 77147759 966 + 104043685 I e canFam3.chr10 40924783 590 - 69331447 I a score=709503.000000 s hg38.chr22_KI270876v1_alt 152871 217 + 263666 TCAGTGACAGTAACCTTTGAGGGATCAGGGCAAGACTC-AGATACTAAAAGACAGGTAGATTCCTGCCA--ATCAGCTGAGG---------GCAT-GCTTTATAGTGGAG-AGAAAAACAATATTCTATTTATTCTTTTTAGGAGTTCAAGGTAATATCCCTTCATTTTTGAAATTATAAATTGCCAACAACACTACATGTTCAATGAGCTATACAAACTGACTAAAGCCA s panTro4.chr22 34530765 217 + 49737984 TCAGTGACAGTAACCTTTGAGGGATCAGGGCAAGACTC-AGAGATTAAAAGACAGGTAGATTCCTGCCA--ATCAGCTGAGG---------GCAT-GCTTTATAGTGGAG-AGAAAAACAATATTCTATTTATTCTTTTTAGGAGTTCAAGGTAATATCCCTTCATTTTTGAAATTATAAATTGCCAACAACACTACATGTTCAATGAGCTATACAAACTGACTAAAGCCA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30944665 217 + 46535552 tcagtgacagtaacctttgagggaccagggcaagactc-agagattaaaagacaggtagattcctgcca--atcagctgagg---------gcat-gctttatagtggag-agaaaaacaataTTCTATTTATTCTTTTTAGGAGTTCAAGGTAATATCCCTTCATTTTTGAAACTATAAATTGCCAACAACACTACATGTTCAATGAGCTATACAAACTGACTGAAGCCa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100496523 217 - 115148730 tcagtgacagtaacctttgagggatcagggcaagactc-agagattaaaaaacaggtagattcctgcca--atcagctgaga---------gcat-gctttacagtggag-agaaaaacaataTTCTATTTATTCTTTTTAGGAGTTCAAGGTAATATCCCTTCATTTTTGAAATTATAAATTGCCAACAACACTACATGTTCAATGAGCTATACAAACTGACTAACGCCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80649979 217 + 95678458 TCAGTGACAGTAACCTTTGAGGGATCAGGGCAAGACTC-AGAGATTAAAAGACAGGTAGATTCCTGCCA--ATCAGCTGAGA---------GCAT-GCTTTATAGTGGAC-AGAAAAACAATATTCTATTTATTCTTTTTAGGAGTTCAAGGTATTATCCCTTCATTTTTGGAACTGTAAATTGCCAACACTACTAGATGTTCAATACGCTATACAAACTGACTAAAGCCA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81076316 217 - 96509753 TCAGTGACAGTAACCTTTGAGGGATCAGGGCAAGACTC-AGAGATTAAAAGACAGGTAGATTCCTGCCA--ATCAGCTGAGA---------GCAT-GCTTTATAGTGGAC-AGAAAAACAATATTCTATTTATTCTTTTTAGGAGTTCAAGGTATTATCCCTTCATTTTTGGAACTGTAAATTGCCAACACTACTAGATGTTCAATACGCTATACAAACTGACTAAAGCCA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76333493 217 + 90941950 TCAGTGACAGTAACCTTTGAGGGATCAGGGCAAGACTC-AGAGATTAAAAGACAGGTAGATTCCTGCCA--ATCAGCTGAGA---------GCAT-GCTTTATAGTGGAC-AGAAAAACaatattctatttattctttttaggAGTTCAAGGTATTATCCCTTCATTTTTGGAATTGTAAATTGCCAACACTACTAGATGTTCAATGTGCTATACAAACTGACTAAAGCCA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18601689 218 + 33263144 TCAGTGACAGTAACCTTTGAGGGATCAGGGCAAGACTCAAGAGATTAAAAGACAGGTAGATTCCTGCCA--ATCAGCTGAGA---------GCAT-GCTCTATAGTGGAG-AGAAAAACAATATTCTATTTATTCTTTTTAGGAGTTCAAGGTAATATCCCTTCATTTTTGGAATTATAAACTGCCAACACTACTAGATGTTCAATGTGCTATACAAACTGACTAAAGCCA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198301767 215 + 210400635 TGAATGACAGTAACCTTTGAGTGATCAGGGTAAGAGTC-AGAGATTAAAAGACTGGTAGATTCTTGCCACTACCACTGTAAA---------GCAT-GCTTTACAGAGGAG-AGAAAA--AATATTCTATTTATTCTGTTTAGGAGTTCAAGGTAATATCCCTTCACTTTTGAAGTTATAAACTGCCAGCAACACT--ATGTTTAATGAACTATAAAAACTGATTAAAGTCA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40925373 205 - 69331447 TCATTGTTAGTAACCTTTGAGGGATCTAGGCAAAACCT---AGGTTAGTAGATGGACA-ATTCTTGCTG--AACAGCTGACAAGACAGCCTGCATAGCTTTAAAATGGAGAAGAAAAATAATATTCTA---------CTTAAGAG-----------ATTCCCTCATTTTGGAAGTTATAAACTGTTGACAACACTACATGATTAATAAGCTATGAAAACTGAGTAAAGTCA i canFam3.chr10 I 590 I 12 e mm10.chr15 77147759 966 + 104043685 I a score=1358057.000000 s hg38.chr22_KI270876v1_alt 153088 460 + 263666 GTTGTATgcgatggctcacgccagtaatcccagcactttgggaggtcgaggcaggtgtatcacctgaggtcaggagttcaagaccagtctggccaacatggtgaaaccctgtctctaccaaaaagtacaaaaattaactgggcatggtgacgcacacctgtagtcccagctacttgggaggctgaggcaggataatcacttgaacccaggaggcggaggttgcagtgagccgagatcacaccactacattccaacctgggcgaaagagtgagaccctgtctcaaaaaca--acaaaaaagaaaCTGACTAAAGCCAAACATGTTATCATAAAACAAAACTTATAACAAAGATATGATACTTAATACTCATAACTgtag---aatgtttagcaaatgctgggaaggaggcaggggatggagagaggttggttactgggtacaaaaacac----agaagaaataagttctt s panTro4.chr22 34530982 460 + 49737984 GTTGTATgcgatggctcacgccagtaatcccagcactttgggaggtcgaggcaggtgtatcacctgaggtcaggagttcaagaccagtctggccaacatggtgaaaccctgtctctaccaaaaagtacaaaacttaactgggcatggtgacgcacacctgtagtcacagctacttgggaggctgaggcaggataatcacttgaacccaggaggcggaggttgcagtgagccgagatcacaccactacattccaacctgggcgaaagagtgagaccctgtctcaaaaaca--acaaaaaagaaaCTGACTAAAGCCAAACATGTTATCATAAAACAAAACTTATAACAAAGATATGATACTTAATACTCATAACTGTAG---AACGTttagcaaatgctgggaaggaggcaggggatggagagaggttggttactgggtacaaaaacac----agaagaaataagttctt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30944882 467 + 46535552 gtcgtatgcgatggctcacgccagtaatcccagcactttgggaggtcgaggcaggtgtatcacctgaggtcaggagttcaagaccagtctggccaacatggtgaaaccctgtctctaccaaaaagtacaaaaattagctgggcatggtgatgcacgcctgtagtcccagctacttgggaagctgaggcaggataatcacttgaacccaggaggtggaggttgcagtgagccgagatcacactactacattccaacctgggctaaagagtgagaccctgtctcaaaaaca--acaaaaaagaaaCTGACTAAAGCCAAACATGTTATCATAAAACAAAACTTATAACAAAGATATGATACTTAATACTCATAACTgtagaataatgtttagcaaatgctgggaagggggcaggggatggagagaggttggttactgggtacaaaaacacagttagaagaaataagttctt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100496740 465 - 115148730 GTTGTATgcgatggctcatgcctgtaatcccagcactttgggaggtcgaggtgggtgtatcacctgaggtcaggagttcaagaccagtctggccaacatggtgaaaccctgtctctaccaaaaaatacaaaaattagctgggcatggtgacacacgcctgtagtcccagctacttgggaggctgaggcaggataatcacttgaacccaggaggcggaggttgcagtgagccaagatcacaccactacattccaacctgggc--aagagtaagaccctgtctcaaaaaca--acaaaaaagaaaCTGACTGAAGCCAAACATGTTATCATAAAACAAAACTTATAACAAAGATATGATACTTAATACTCATAACTgtagaatgatgtttagcaaatgctgggaaggaggcaggggatggagagaggttggttactgggtacaaaaacacagttagaagaaataagttctt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80650196 469 + 95678458 GTTGTAcgcaatggctcatgcctgtaatcccagcactttgggaggtcaaggcgggtggatcacctgaggtcaggagttcaagatcagtctggccaacatggtgaaaccctaactctaccaaaaaatacaaaaattagctgggcatggtgacacacacctgtagtcctagctacttgggaggctgaggcaggataatcacttgaactcagtaggcagaggttgcagtgagccaagatcatgccactacattctagcctgggcgaaagagtgagaccctgtctcaaaaacaacacaaaaaagaaaCTGACTAAAGCCAAACATGTTATCATAAAACAACATTTATAACAAAGATATGATACTTAATACTCATAACTgtaaaatgatgtttgccaaatgctgggaaggaggcaggggatggagagaggttggttactgggtacaaaaacacagttagaataaataagttctt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81076533 469 - 96509753 GTTGTAcgcaatggctcatgcctgtaatcccagcactttgggaggtcaaggcgggtggatcacctgaggtcaggagttcaagatcagtctggccaacatggtgaaaccctaactctaccaaaaaatacaaaaattagctgggcatggtgacgcacacctgtagtcctagctacttgggaggctgaggcaggataatcacttgaactcagtaggcagaggttgcagtgagccaagatcatgccactacattctagcctgggcgaaagagtgagaccctgtctcaaaaacaacacaaaaaagaaaCTGACTAAAGCCAAACATGTTATCATAAAACAACATTTATAACAAAGATATGATACTTAATACTCATAACTgtaaaatgatgtttgccaaatgctgggaaggaggcaggggatggagagaggttggttactgggtacaaaaacacagttagaataaataagttctt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76333710 469 + 90941950 GTTGtacgcaatggctcatgcctgtaatcccagcactttgggaggtcaaggcgggtggatcacctgaggtcaggagttcaagatcagtctggccaacatggtgaaaccccaactctaccaaaaaatacaaaaattagctgggcatggtgacgcacgcctgtagtcctagctacttgggaggctgaggcaggataatcacttgaactcagtaggcagaggttgcagtgagccaagatcatgccactacattctagcctgggggaaagagtgagaccctgtctcaaaaacaacacaaaaaagaaactgactaaagccaaacatgttatcataaaacaacaTTTATAACAAAGATATGATACTTAATACTCATAACTGTAAAATGATGTTTGCCAAATGctgggaaggaggcaggggaTGGAGAGAGGTTGGTTACTGGGTACAAAAACACAGTTAGAATAAATAcgttctt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18601907 467 + 33263144 GTTGTATgcaatggctcatgcctgtaatcccagcactttgggaggtcgaggcgggtggatcacctgaggtcaggagttcaagatcagtctggccaacatggtgaaaccctgtctctaccaaaaaatacaaaaattagctgggcatggtgacgcacgcctgtagtcctagctatttgggaggctgaggcaggataatcacttgaactcagtaggcagaggttgcagtgagccaagatcatgccactacattctacccagggcgaaagagtgagaccttgtctcaaaaacaacacaaaaaagaaaCTGACTAAAGCCAAACATGTTATCATAAAACAACATTTATAACAAAGATATGATACTTAATACTCATAACTgtaaaatgatgtttgccaaatgctgggaaggaggcagaggatggagagaggttggttactgggtacaaaa--acagttagaataagtaagttctt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198301982 452 + 210400635 gctgggcacaatggctcacgcctgtaatcccagcactttgggaggctgaggtaggtggatcacctgaggtcaggagtttgagaccagtgtggctaacatggtgaaaccccatttcta-caaaaattccaaaaattagctgaatgtggtggcatacatctgtagtcccagttacttgggaggctgaggcaggagaatcacttgaacccaggaggtagaggttgcagtgagccaagacagtgccattgcactccagcctgggcgacagagtgagactctatgtgaaaaaca--acaaaaaagaaaCTGACTAAAGCCAAACATGTTATCATAAAACGAAACT----------ATATGATACTTAATACTCATAACTgtagaatgatgtttactgaatgctggaaaggaggaagcagatcaagacgggtcggttaatgggtagaaaaacac----agAAGAAATAttttctt i calJac3.chr1 C 0 I 274 e mm10.chr15 77147759 966 + 104043685 I e canFam3.chr10 40925578 12 - 69331447 I a score=215151.000000 s hg38.chr22_KI270876v1_alt 153548 90 + 263666 ggccaggtgcagtggctcgcacctgtaatccaagcactctgggatgcagaggcaggcagatcacttgaggtcagaatttcgagagcagcc s panTro4.chr22 34531442 90 + 49737984 ggccaggtgcagtggctcacacctgtaatcccagcactctgggatgcagaggcaggcagatcacctgaggtcagaatttcgagagcagcc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30945349 90 + 46535552 ggccaggtgcggtggctcgcacctgtaatcccagcactctgggatgcagaggcgggcagatcacttgaggtcaggatttcgagagcagcc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100497205 90 - 115148730 gcccaggtgtggtggctcgcacctgtaatcccagcactctgggaggcagaggcaggcaaatcacttgaggtcaggatttcaagagcagcc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80650665 90 + 95678458 ggccaggcgcggtggctcacacctgtaatcccagcactctgggaggcagaggtgggcagatcacttgaggtcaggagttcgacagcagcc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81077002 90 - 96509753 ggccaggcgcggtggctcacacctgtaatcccagcactctgggaggcagaggtgggcagatcacttgaggtcaggagttcgacagcagcc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76334179 90 + 90941950 ggccaggcgcggtggctcgcacctgtaatcccagcactctgggaggcagaggtgggcagatcacttgaggtcaggagttcgagagcagcc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18602374 90 + 33263144 ggccaggcgcggtggctcgcacctgtaatcccagaactctgggaggcagaggtgggcagatcacttgaggtcaggagttcgagagcagcc i chlSab2.chr19 C 0 C 0 e mm10.chr15 77147759 966 + 104043685 I e canFam3.chr10 40925578 12 - 69331447 I e calJac3.chr1 198302434 274 + 210400635 I a score=1236908.000000 s hg38.chr22_KI270876v1_alt 153638 436 + 263666 tggccaacatggtgaaaccctgtctctactaaaattac-aaaattagccaggtgtggtg--gcatgcacccgtagtcctacctacttgggaggctgaggcaggagaatcacttgaacccaggaggcgcagattgcagtgagccaagatctgagccaagactgcaccactgtactccagcctgggcaacatagtgagattcagtctccaaaaca------------------------------------------------------------aagaagaagaagaagttctaatattcaacagcaca-----gtgactatagttaacaataatttattgtgtatttcaaaatagctagaaggggagatttgaaatgt--tctctatacaaagaaatgataaatatttgaggtcatgggtatcctaattactgatttgatcattacacattatacgcatgtatcaaaatatcatatgtaccccataaatatgtataattatgcatc s panTro4.chr22 34531532 436 + 49737984 tggccaacatggtgaaaccctgtctctactaaaattac-aaaattagccaggtgtggtg--gcatgcacctgtagtcctagctacttgggaggctgaggcaggagaatcacttgaacccaggaggcgcagattgcagtgagccgagatctgagccaagattgcaccactgcactccagcctgggcaacatagtgagattcagtctccaaaaca------------------------------------------------------------aagaagaagaagaagttctaatattcaacagcaca-----gtgactatagtttacaataatttattgtgtatttcaaaatagctagaaggggagatttgaaatgt--tctctatacaaagaaatgataaatatttgaggtcatgggtatcctaattactgatttgatcattacacattgtacgcatgtatcaaaatatcatatgtaccccataaatatgtataattatgcatc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30945439 434 + 46535552 tggccaacatggtgaaatcctgtctctattaaaattacaaaaattagccaagtgtggtg--gtgtgcacctgtagtcctagctacttgggaggctgaggcagaagaatcacttgaacccaggaggcgcagattgcagtgagccgagatctgagccaagatcgcaccactgcactccagcctgggcaacatagtgagactcagtctccaaaaca---------------------------------------------------------------aagaagaagaagttctaatattcaacagcaca-----gtgactatagttaacaataatttattgtgtatttcaaaatagctagaaggggagatttgaaatgt--tctctagacaaagaaatgataaatatttgaggtcatgggtatcctaattactgctttgatcattacacattgtacgcatgtatcaaaatatcatatgtaccccataaatatgtataattatgcatc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100497295 497 - 115148730 tggccaacgtggtgaaaccctgtttctactaaaattacaaaaattagccatgcatggtg--gcgtgcacctgtagtcctagctacttgggaggctgaggcaggagaatcacttgaacccaggaggcccagattgcagtgagccgagatctgagccaacatcacaccactgcactccagcctgggcaacatagtgagactcagtctccaaaaCaaagaagaaagaagaaagaagaaagaagaagaaagaagaaagaagaaagaagaagaagaagaagaagaagaagaagatctaatattcaacagcaca-----gtgactatagttaacaataatttattgtgtatttcaaaatagctagaaggggagatttgaaatgt--tctctatacaaagaaatgataaatatttgaggtcatgggtatcctaattaccgatttgatcattacacattgtacgcatgtatcaaaatatcatatgtaccccataaatatgtataattatgtatc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80650755 469 + 95678458 tggccaacatggtgaaatgctgtctctactaaaattacaaaaattagctaggcgtggtg--gcgtgcacctgcagtcctagctactttggaggctgaggcaggagaatcacttgaacccaggaggtgcagactgcaatgagccgagatctgagccaagatcgcaccactgcactctggcctgggcaatagagtgagactcagtctccaaaaaa--------------------------aaagaagaagaaaaagaagaggaagaggaattggaagcggaagttgaagttctaatattcgaca-caca-----gtgactatagttaacaataatttattatgtatttcaaaatagctagaaggggagatgtgaaatat--tctctatacaaagaaatgataaatatctgaggtgatgggtatcctaattactgatttgatcattacacattgtatgcatgtat-aaaatatcataagtactccataaatatgtataattatgtacc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81077092 469 - 96509753 tggccaacatggtgaaatgctgtctctactaaaattacaaaaattagctaggcgtggtg--gcgtgcacctgcagtcctagctactttggaggctgaggcaggagaatcacttgaacccaggaggtgcagactgcaatgagccgagatctgagccaagatcgcaccactgcactctggcctgggcaatagagtgagactcagtctccgaaaaa--------------------------aaagaataagaaaaagaagaggaagaggaagtggaagcggaagttgaagttctaatattcgaca-caca-----gtgactatagttaacaataatttattatgtatttcaaaatagctagaaggggagatgtgaaatat--tctctatacaaagaaatgataaatatctgaggtgatgggtatcctaattactgatttgatcattacacattgtatgcatgtat-aaaatatcataagtactccataaatatgtataattatgtacc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76334269 469 + 90941950 tggccaacatggtgaaatgctgtctctactaaaattgcaaaaattagccaggcgtggtg--gcgtgcacctgcagtcctagctacttcggaggctgaggcaggagaatcacttgaacccaggaggtgcagactgcaatgagccgagatctgagccaagatcgcaccactgcactctggcctgggcaatagagtgagactcagtctccaaaaaa--------------------------aaagaagaagaaaaagaagaggaagaggaagtggaagcggaagttgaagTTCTAATATTCGACa-caca-----gtgactatagttaacaataatttattatgtatttcaaaatagctagaaggggAGATGTGAAATAT--TCTCTATacgaagaaatgataaatatctgAGGTGATGGGTATCCTAAttactgatttgatcattacacattgtaagCATGTAT-AAAATATCAtaagtactccataaatatgtataattatgtatc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18602464 463 + 33263144 tggccaacatggtgaaatgctgtctctactaaaattacaaaaattagccaggcgtggtg--gcgtgcacctgcagtcctagctacttcggaggctgaggcaggagaatcacttgaacccaggaggtgcagactgcaatgagccgagatctgagccaagatcgcaccactgcactctggcctgggcaatagagtgagactcagtctcc-aaaaa--------------------------aaagaagaagaaaaagaagaggaag------tggaagcggaagttgaagttctaatattcgaca-caca-----gtgactatagttaacaataatttattatgtatttcaaaatagctagaaggggagatgtgaaatat--tctctatacaaaaaaatgataaatatctgaggtgataggtatcctaattactgatttgatcattacacattgtatgcatgtatcaaaatatcataagtaccccataaatacatataattatgtatc i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198302708 443 + 210400635 tagccaccatagtgaaaccccatctttactaaaattacaaaaattagccgggtgtggtggtgcacgtacctgtagtcccagctgctcgggaggctgagacaggataatcgcttgaacccaggaggtgcagattgcactaagctgagatgtgaaccaggatcgcaccactgcattccagcctgggcaacagagtgagactcagtctcaatgaca---------------------------------------------------------------acaaaaaGGaagttctaatgttcaacagcacagtagggtgactgtagttaacaaaaattcattggatatttcaaaatagcttgaaggggagatctgaaacgttctctctatacaaagaaatgacaaatatttgaggtgatgggtattctaattaccaatttgatcattacacattgtaggcatgtatcaaaatattgtatgtaccccataaatatgtataattatgtatc i calJac3.chr1 I 274 C 0 e mm10.chr15 77147759 966 + 104043685 I e canFam3.chr10 40925578 12 - 69331447 I a score=2088272.000000 s hg38.chr22_KI270876v1_alt 154074 600 + 263666 aataaaaCTTAAAA-----------AGTAATCATAATTGATATTTTTACTTAGTGATTAGACATAAATGACAAATCATTCATATAAATTAATGCAACTAGTccaggacagtcagtaaacattctggaaaccgtatgttttcatatctatgaggagtaattcaaggaagtaggaaaaataagc-aaggcaacagaagattaaagggaacgttcagcag-tatcttcaaatatttggtttttatgtagaaga--catgaaaccactcaatgcaactccagatgagaaaatgagaaggagtgagaagacaatcatgaaaacagatttcagctcataaagaaaacttttctacttatc-a-tggccaacaatggaactatttatcttatgaggtTCACAGAATaatggaagagcatgcgaatttgggactaaatagatctccagtttgaaacctatctctctctgttt---------ccaggctgcctgatctttagaatctcaaagtctcctgcaaaaaatgggaaaaacctcacctatctcaaagat-gattgacaagtgatacataatatg--------aataattatgtttgtaaatgtgctatgtatgtaaaattgactggcacaaagtaggTA s panTro4.chr22 34531968 609 + 49737984 aataaaaCTTAAAA-----------AGTAATCATAATTGATATTTTTACTTAGCAATTAGACATAAATGACAAATCATTCATATAAATTAATGCAACTAGTccaggacagtcagtaaacattctggaaaccgtatgttttcatatctatgaggagtaattcaaggaagtaggaaaaataagc-aaggcaacagaagattaaagggaacgttcagcag-tatcttcaaatatttggtttttatgtagaaga--catgaaaccactcaatgtaactccagatgagaaaatgagaaggagtgagaagacaatcatgaaaacagatttcagctcataaagaaaacttttctacttttc-a-tggccaacaatggaactatttatcttatgaggtTCACAGAATaatggaagagcatgcgaatttgggactaaatagatctccagtttgaaacctatctctctctgtttccagagtcaccaggctgcctgatctctagaatctcaaagtctcctgcaaaaaatgggaaaaacctcacctatctcaaagat-gattgacaagtgatacataatatg--------aataattatgtttgtaaatgtgctatgtatgtaaaattgactggcacaaagtaggTA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30945873 609 + 46535552 aataaaaCTTAAAA-----------AGTAATCATAATTGGTATTTTTACTTAGCGATTAGACATAAATGACAAATCATTCATATAAATTAATGCAACTAGTCCAGGAGAGTCAGTAAACATCCTGGAAACTGTATGTTTTcatatctatgaggagtaattcaaggaagtaggaaaaataagc-aaggcaacagaagattaaagggaacgttcggcag-tatcttcaaatatttggtttttatgtagaaga--catgaaaccactcaatgaaactccagatgagaaaacgagaaggagtgagaagacaataatgaaaacagatttcagctcataaagaaaacttttctacttttc-a-tggccaagaatggaactatttatcttatgcggtTCACAGAATaatggaagagcatgcgaatttgagactaaacagatctccagtttgaaacctatctctctctgtttctagagtcaccaggctgcctgacctctagaatctcaaagtctcatgcaaaaaatgggaaaaacctcacctatctcaaagat-gattgacaagtgatacataatatg--------aataattatgtttgtaaatgtgctatgtatgtaaaattgactggcacaaagtaggTA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100497792 609 - 115148730 aataaaaCTTAAAA-----------AGTAAACATAATTAATATTTTTACTTAGTGATTAGACATAAATGACAAATCATTCATATAAATTAATGCAATTAGTctaggacggtcagtaaacattctggaaaccatatgttttcatatctatgaggagtaattcaaggaagtaggaaaaataagc-gaggcaacagaagattaaagggaacgttcagcag-tatcttcaaatatttggtttttatgtagaaga--catgaaaccgctcaatgtaactccagataagaaaacgagaaggagtgagaagacaataatgaaaacagatttcagctcataaagaaaacttttctacttttc-a-cggccaacaatggaactatttatcttatgaggtTCACAGAATaatggaagagcatgcgaatttgggactaaatagatctccagtttgaaacctatctctctctgtttccagagtcaccaggttgcctgaactctagaatctcaaagtctcatgcaaaaaatgggaaaaacctcacctacctcaaagat-gattgacaagtgatacataatatg--------aataattatgtttgtaaatatgctatgtatgtaaaattgactggcacaaagtaggTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80651224 609 + 95678458 aataaaaCTTAAAA-----------AGTAATCATAATTGATATTTTTACTTAGCAATTAGACATAAATGATAAATCATCCATATAAATTAATGCAATTAGTccaggacagtcagtaaacattctggaaaccgtatgttttcatatctatgaggaataattcaaggaagtaggaaaaataagc-aaggcaacagaagattaaagggaacattcagcag-tatcttcaaatatttggattttatgtagaaga--catgaaaccactcaatgtaactccagatgagaaatcgagaaggaatgagaagacaataatgaaaacagatttcagctcataaagaacacttttctacttttc-a-tggccaacaatggaactatttatcttatgaggCTCACAgtataatggaagagcatgtgaatttgggactaaatagatctccagtttgaaacctatctctctctgtttccagagtcaccaggttgcctgacctctagaatctcaaagtctcatgcaaaaaatgggaaaaacctcacctacctcaaagat-gactgaccagtgatacataatgtg--------aatagttatgtttgtaaatgtgctatgtatgtaaaattgactggcacagagtaggTA i rheMac3.chr10 C 0 I 170 s macFas5.chr10 81077561 609 - 96509753 aataaaaCTTAAAA-----------AGTAATCATAATTGATATTTTTACTTAGCAATTAGACATAAATGATAAATCATCCATATAAATTAATGCAATTAGTccaggacagtcagtaaacattccggaaaccgtatgttttcatatctatgaggaataattcaaggaagtaggaaaaataagc-aaggcaacagaagattaaagggaacattcagcag-tatcttcaaatatttggattttatgtagaaga--catgaaaccactcaatgtaactccagatgagaaatcgagaaggaatgagaagacaataatgaaaacagatttcagctcataaagaacacttttctacttttc-a-tggccaacaatggaactatttatcttatgaggCTCACAGTATAATGGAAGAGCATGTGAATTTGGGACTAAATAGATCTCCAGTTTGAAACCTATCTCTCTCTGTTTCCAGAGTCACCAGGTTGCCTGACCTCTAGAATCTCAAAGTCTCATGCAAAAAATGGGAAAAACCTCACCTACCTCAAAGAT-GACTGACCAGTGATACATAATGTG--------AATAGTTATGTTTGTAAATGTGCTATGTATGTAAAATTGACTGGCACAGAGTAGGTA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76334738 609 + 90941950 aataaaacttaaaa-----------agtaatGATAATTGATATTTTTACTTAGCAATTAGACATAAATGATAAATCATCCATATAAATTAATGCAATTAGTCCAGGACAGTCAGTAAACATTCTGGAAACCGTATGTTTTCATATCTATGAGGAATAATTCAAGGAAGTAGGAAAAATAAGC-AAGGCAACAGAAGATTAAAGGGAACATTCAGCag-tatcttcaaatatttggatTTTATGTAGAAGA--CATGAAACCACTCAATGTAACTCCAGATGAGAAATCGAGAAGGAATGAGAAGACAATAATGAAAACAGATTTCAGCTCATAAAGAACACTTTTCTACTTTTC-A-TGGCCAACAATGGAACTATTTATCTTATGAGGCTCACAGTATAACGGAAGAGCATGTGAATTTGGGACTAAATAGATCTCCAGTTTGAAacgtctctctctctgtttccagaGTCGCCAGGTTGCCTGACCTCTAGAATCTCAAAGTCTCAtgcaaaaaatgggaaaaaccTCACATACCTCAAAGAT-GACTGACAAGTGATACATAATGTG--------AATAATTATGTTTGTAAATGTGCTATGTATGTAAAATTgactggcacagagtaggta i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18602927 609 + 33263144 aataaaaCTCAAAA-----------AGTAATCATAATTGATATTTTTACTTAGCAATTAGACATAAATGATAAATCATCCATATAAATTAATGCAATTAGTccaggacagtcagtaaacattctggaaaccgtatgttttcatatctatgaggaataattcaaggaagtaggaaaaataagc-aaggcaacagaagattaaagggaacattcagcag-tatcttcaaatatttggattttatgtagaaga--catgaaaccactcaatgtaactccagatgagaaatcgagaaggaatgagaagacaataatgaaaacagatttcagctcataaagaacacttttctacttttc-a-tggccaacaatggaactatttatcttatgaggCTCACAGTATAACGGAAGAGCATGTGAATTTGGGACTAAATAGATCTCCAGTTTGAAACCTATCTCTCTCTGTTTCCAGAGTCACCAGGTTGCCTGACCTCTAGAATCTCAAAGTCTCATGCAAAAAATGGGAAAAACCTCACCTACCTCAAAGAT-GACTGACAAGTGATACATAATGTG--------AATAATTATGTTTGTAAATGTGCTATGTATGTAAAATTGACTGGCACAGAGTAGGTA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198303151 601 + 210400635 aataaaaCTTAAAA-----------AGTAGTCATAATTGATATTTTTACTTAGTAATTAGACATAAAT-----ATTATTCATAAAAATTAATGCAATTtgcccaggacagtcagtaatcattctggaaaccgtatgctttcatatctatgaggaataattgaaggaagtaggaaaaataagcgaaggcaacagaagatt-aagagagcgttcagtag-tatcttcaaatatttggattttatatagaaga--catgaaaccactcaatgtaactccagatgagaaagtg---aggagtgagaggacaataatgaaaacagattttagctcataaagaaaacttttctacttttcaa-tagccaacaatggaGCTATTTATC-TACAAGGCTCACAGTATCATGGAAGAGCATGTGAATTTGGCACTAAATAGATCTCCAGTTTTTAACCTATCTCTGTCTGTTTCCAGAGTCACCAGATTGCCTGACCTCCAGAATCTCAAAGTCTCGTGCAAAAAATGGAAAAAGCCTCACCTACCTCAAAGAT-GACTGACAAGTGATACATAATATG--------AATAATTATGTTTGTAAATGTGATGCGTATGTAAAATTGACTGGTACAAAGTAGGTA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40925590 601 - 69331447 AACAAAATTTATAAAAGATATGATTAATACTCATAATTGATA-TTTTATTTAGTAATTAGATATAAATGATAAATCATCCACAGAAATTGAAGTAAC-AGTctgggacagtc----aagtctctggaaac--tatttcctcctaactgtgaggaccaatgcga-gaaataggtaagaaatgc-aaagaggacgaagatgaaaaggaactcttggcagttattttcacatatttggcttttatgaagaagagcaattaaatctctccctg--actctggatgacagaacaaggtgaggtgagaaaaccctaatgaaaaagg---tca--ctataaggaaaactcttctacccttt-actggccaacaacggaactatttatcttatgaggCTGCTAGTACAATGGAAGAGTATGCAAATATGGAATTAAATCGATTTCAGGTTTGAAACCCATCTCTGTCTGTACCTAGAGCCACCCAGGTGCCTGAC-------ATCTCAAAGTCTAATGT-----ATGGGAAAAATAGCACCTATCTCAAAAAGAGATTGACAGGTAATGTATGATATGACCACAATAAAAATTATGTATGTAAATGTGATTTGTATGTAAA----ACTGGTGTAAAGTAGGTA i canFam3.chr10 I 12 C 0 e mm10.chr15 77147759 966 + 104043685 I a score=68504.000000 s hg38.chr22_KI270876v1_alt 154674 27 + 263666 TAAAAAAACAAAAAC--ATTTTTATAATG s panTro4.chr22 34532577 29 + 49737984 TAAAAAAACAAAAACTTATTTTAATAATG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30946482 29 + 46535552 TAAAAAAACAAAAACTTATTTTAATAATG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100498401 29 - 115148730 TAAAACAACAAAAACTTATTTTAATAATG i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81078170 29 - 96509753 AGCAAAACCAAAAACTTATTTTAATAACA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76335347 29 + 90941950 AGCAAAAACAAAGACTTATTTTAATAACA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18603536 29 + 33263144 TGCAAAAACAAAAACTTATTTTAATAACA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198303752 29 + 210400635 TGCAAAAACAAAAACTTATTTTAATAATG i calJac3.chr1 C 0 C 0 s canFam3.chr10 40926191 29 - 69331447 TGCAAAAACAAAAACTTATTTCAGTAACA i canFam3.chr10 C 0 C 0 e mm10.chr15 77147759 966 + 104043685 I e rheMac3.chr10 80651833 170 + 95678458 I a score=191454.000000 s hg38.chr22_KI270876v1_alt 154701 53 + 263666 GTCATTATTAGtggtggttaagaacagaaatgctggagccaaactccttgggt s panTro4.chr22 34532606 53 + 49737984 GTCATTATTAGtggtggttaagaacagaaatgctggagccaaactccttgagt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30946511 53 + 46535552 TTCATTATTAGtggtggttaagaacagaaatgctggagccaaactccttgggt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100498430 53 - 115148730 GTCATTATTAGtggtggttaagaacagaaatgctggagccaaactccttgggt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80652003 53 + 95678458 GTCATTATTAGtggtggttaagaacagaaatgctggagccaaactccttgggt i rheMac3.chr10 I 170 C 0 s macFas5.chr10 81078199 53 - 96509753 GTCATTATTAGtggtggttaagaacagaaatgctggagccaaactccttgggt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76335376 53 + 90941950 GTCATTATTAGTGGTGGTTAAGAACAGAAATGCTGGAGCCAAACTCCTTGGAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18603565 53 + 33263144 GTCATTATTAGtggtggttaagaacagaaatgctggagccaaactccttgggt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198303781 53 + 210400635 GTCATTATTAatggtggttaagaacagaaacgctgaagccaaactccttaggt i calJac3.chr1 C 0 C 0 s canFam3.chr10 40926220 45 - 69331447 GTCATCATTAGTGGCAATTAAGAACAGGGAAGggga--------tccttgggt i canFam3.chr10 C 0 I 1038 e mm10.chr15 77147759 966 + 104043685 I a score=823396.000000 s hg38.chr22_KI270876v1_alt 154754 278 + 263666 ttcctaatttctacaacatggacattaatagtactgctgagtaagtatataaggctgctgagtggaataaatgctctaaaatatgtaaagcacttaagacaatgcttaatgcacagtatgtgctcTGCattattatttag---tattattagataatattaatatttttatcatagaataatgtatactttattacatattatAAGAATGAAGTAATCTTATTCAACAATGAATTCCATTACTGCAAGTGTTTTATCAAAGTCTTAAGTCAGGGATGGAAA s panTro4.chr22 34532659 278 + 49737984 ttcctaatttctacaacatggacattaatagtactgctgagtaagtatataaggctgctgagtggaataaatgccctaaaatatgtaaagcacttaagacaatgcttaatgcacagtatgtgctcTGCATTATTATTTAG---TATTATTAGGTAATATTAATATTTTTATCACAGAATAATGTATACTTTATTACATATTATAAGAATGAAGTAATCTTATTCAACAATGAATTCCATTACTGCAAGTGTTTTATCAAAGTCTTAAGTCAGGGATGGAAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30946564 273 + 46535552 ttcctaatttctacaacatggacattaatagtactgctgagtaagtatataaggctgctgagtggaataaatgccctaaaatatgtaaagcacttaagacaatgcttaatgcacagtatgtgctcTGCattattatttag---tattattagataatattaatatttttatc-----ataatgtatactttattacatattataataatGAAGTAATCTTATTCAACAATGAATTCCATTAATGCAAGTGTTTTATCAAAGTCTTAAGTCAGGGATGGAAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100498483 276 - 115148730 ttcctaatttctacaacatggacattaatagtactgctgagtaag--tataaggctgctgagtggaataaatgccctaaaatatgtaaagcacttaagacaatgcttaatgcacggtatgtgctcTGCattattatttag---tattattagataatattaatatttttatcatagaataatgtatactttattacatattataataatGAAGTCCTCTTATTCAACAACGAATTCCATTACTGCAAGTGTTTTATCAAAGTCTTAAGTCAGGGATGGAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80652056 281 + 95678458 ttcctaatttctacaacatggacattaacagtactgctgagtaagtagataaggctgctgagtggaataaatgtcctaaaatatgtaaagcacttaagacagtgcttaatgcacagtatgtactcTGCattattatttagtattattattagacaatattaatatttttatcataaaataatatatactttattacatattataataatGAAGCCATTTTATTCAACAATGAATTCCGTTACTGCAAGTGTTTTATCAAAGTCTTAAGTCAGGGATGGAAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81078252 281 - 96509753 ttcctaatttctacaacatggacattaacagtactgctgagtaagtagataaggctgctgagtggaataaatgtcctaaaatatgtaaagcacttaagacagtgcttaatgcacagtatgtactcTGCattattatttagtattattattagacaatattaatatttttatcataaaataatatatactttattacatattataataatGAAGCCATTTTATTCAACAATGAATTCCGTTACTGCAAGTGTTTTATCAAAGTCTTAAGTCAGGGATGGAAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76335429 278 + 90941950 TTCCTAATTTCTACAACATGGACATTAACAGTACTGCTGAGTAAGTAGATAAGGCTGCTGAGTGGAATAAATGtcctaaaatatgtaaagcacttaagaCAGTGCTTAATGCACAGTATGTACTCTGCATTATTATTTAG---CATTATTagacaatattaatatttttttcataaaataatatatactttattacatattataataatGAAGCCATTTTATTCAACAATGAATTCCGTTACTGCAAGTGTTTTATCAAAGTCTTAAGTCAGGGATGGAAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18603618 278 + 33263144 ttcctaatttctacaacatggacattaacagtactgctgagtaagtagataaggctgctgagtggaataaatgtcctaaaatatgtaaagcacttaagacagtgcttaatgcacagtatgtactcTGCattattatttag---tattattagacaatattaatatttttatcataaaataatatatactttattacatattataataatGAAGCCATTTTATTCAACAATGAATTCCATTACTGCAAGTGTTTTATCAAAGTCTTACGTCAGGGATGGAAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198303834 265 + 210400635 ttcctaatttctacaacatgaacattaataatactgctgagtaagtatataaggctgctgagtagaataaatgccctaatatatgtaaagcacttaagacagtccttaatgcacaatatgtactcTGC--Cattatttag---tatta----ataacattaatatttttatc-----ataatgtatattttgttatatattataataataaaGTCATTTTATTCAATGA--ATTTCCATTATTCCAAGTGTTTTATCAAAGTCTTAAGTCAGAGATGGAAA i calJac3.chr1 C 0 C 0 e mm10.chr15 77147759 966 + 104043685 I e canFam3.chr10 40926265 1038 - 69331447 I a score=825324.000000 s hg38.chr22_KI270876v1_alt 155032 237 + 263666 TTTCAGAAATGAATCAGAGTCTCAACTAAATTAATTTattcacacattcaacaaatatttactgaatacccaatacctacaaggggcattagagtacagtggttaagaatatcaatttctaagccagtctgtctggatatcattccccacaacatctcttagtagctgtctgaacttgggcaagttacttaaccgtcatatgcct-agtttcctctttt----------gtacaatggagataacaca- s panTro4.chr22 34532937 237 + 49737984 TTTCAGAAATGAATCAGAGTCTCAACTAAATTAATTTattcacacattcaacaaatatttactgaatacccaatacctacaaggggcattagagtacagtggttaagaatatcaatttctaagccagtctgtctggatatcattccccacaacatctcttagtagctgtctgaacttgggcaagttacttaaccatcatatgcct-agtttcctctttt----------gtacaacggagataacaca- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30946837 237 + 46535552 TTCCAGAAATGAATCAGAGTCTCAACCAAATTAATTTattcacacattcaacaaatatttactgaatacccaatacctacaagtggcattagagtacagtggttaagaatatcaatttctaagccagtctgtctggatatcattccccacaacatctcttagtggctgtctgaacttgggcaagttacttaaccatcatatgcct-ggtttcctctttt----------gtacaatggagataacaca- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100498759 237 - 115148730 TTTCAGAAATGAATCAGAGTCTCAACTAAATTAATTTattcacacattcaacaaatatttactgaatacccaatacctacaaggggcattagagtacagtggttaagaatatcaatttctaagccagtctgtctggatatcattccccacaacatctcttagtagctgtctgaacttgggcaagttacttaatcatcatatgcct-agtttcctctttt----------gtacaatggagataacaca- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80652337 234 + 95678458 TTTCAGAAATGAATCAGAGTCTCAACTAAATTAATTTattcacacattcaacaaatatttactgaatacccaatacctacaaggGG---tagcatacagtggctaagaataccaatttctaagccagtctgtctagatatcattccccacaagatatcttagcagctgtctgaacttgggcaagttacttaaccatcatatgcct-agtttcctctttt----------gtacaatggagataacaca- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81078533 234 - 96509753 TTTCAGAAATGAATCAGAGTCTCAACTAAATTAATTTattcacacattcaacaaatatttactgaatacccaatacctacaaggGG---tagcatacagtggctaagaataccaatttctaagccagtctgtctagatatcattccccacaagatatcttagcagctgtctgaacttgggcaagttacttaaccatcatatgcct-agtttcctctttt----------gtacaatggagataacaca- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76335707 233 + 90941950 TTTCAGAAATGAATCAGAGTCTCAACTAAATTAATTTATTcacacattcaacaaatatttactgaatacccaATACCTACAAGGGG---TAGCATACAGTGGCTAAGAATACCAATTTCTAAGCCAGTCTGTCTAGATATCATTCCCCACAAGATCTCTTAGCAGCTGtctgaacttgggcaagttacttaaccatcATATGCCT-AGTTTCCT-TTTT----------GTACAATGGAGATAACACA- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18603896 234 + 33263144 TTTCAGAAATGAATCAGAGTCTCAACTAAATTAATTTattcacacattcaacaaatatttactgaatacccaatacctacaaggGG---tagcatacagtggctaagaatatcaatttctaagccagtctgtctagatatcattccccacaagatctcttagtagctgtctgaacttgggcaagttacttaaccatcatatgcct-agtttcctctttt----------gtacaatgcagataacaca- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198304099 247 + 210400635 TTTCAGAAATGAATCAGTGTCTCAACTAAATTAATTTattcacacatgcaacaaatatttactgaatacccaatacctacaaggggcattcgagtacagtggttaagaatatcaatttctaagccagtctgtctggatatgattccccataacatctcttagtagctgtctgaatttgggtaatttacttaaccatcatatgcct-agtttcgtcttttgaaagatggagtccaatggagataataaa- i calJac3.chr1 C 0 C 0 s canFam3.chr10 40927303 230 - 69331447 TTTTAGAAAGGGA----AGTCTCAACTAAATTAattcatttacacattcaacaaacacatattgaatatataatacctgcaagaggcactgaggtacagtgcttcaaagtgtggattcccaagttggtctg--tggatatgaatccccac---atctcttagcagctgtataaacttgggcaagctacctaaccattatatgtctcagtttcctcttct----------gtaccagggggataatgata i canFam3.chr10 I 1038 C 0 e mm10.chr15 77147759 966 + 104043685 I a score=963866.000000 s hg38.chr22_KI270876v1_alt 155269 312 + 263666 gagctgctgagaggat-tcaatgagttaatgagggtaaagtgcttagaacggtatctgatattaatgcatcataagcatatataaagattagctatt---------------tttattatgactatgtgccaggcactgttctacacac-tgggaatacaacagactgctgacgaggatcctgatctcagggagcttc----tgttt---ggggtc-ggggaggagacagacaacaaacaa--------acatataacaatcaacggtaagaactaaaatcagtgacaagtgaagacaaagcagaatgaaggtaggagtgatgagggagtgctggttt-agctagg s panTro4.chr22 34533174 312 + 49737984 gagctgctgagaggat-tcaatgagttaatgagggtaaagtgcttagaatggtatctgatattaatgcatcataagcatatataaagattagctatt---------------tttattatgactatgtgccaggcactgttctacacac-tgggaatacaacagactgctgacgaggatcctgatctcagggagcttc----tgttt---ggggtc-ggggaggagacagacaacaaataa--------acatataacaatcaacggtaagaactaaaatcagtgacaagtgaagacaaagcagaatgaaggtaggagtgatgagggagtgctggttt-agctagg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30947074 313 + 46535552 cagctgctgagaggat-tcaatgagttaatgagggtaaagtgcttagaacagtatctgattttaatgcatcataagcataaataaagattagctatt---------------tttattatgactacgtgccaggcactgttctacacac-tgggaacacaacagactgctgacaaggatcctgatctcagggagcttc----tgttt---ggggtcaggggaggagacagacaacaaacaa--------acatataacaatcaatggtaagaactaaaatcagtgacaagtgaagaaaaagcagaatgaaggtaggagtgatgagggagtgctggttt-agctagg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100498996 310 - 115148730 gagctgctgagaggat-tcaatgagttaatgagggtaaagtgcttagaacggtatctgatattaatgcatcataagcatatataaagattagcta------------------ttattatgactatgtgccaggcactattctacacac-tgggaatacaacagactgctgacgaggatcctgatctcagggagcttc----tgttt---gaggtcaggggaggagacagaaaacaaacaa--------acatataacaatcaatggtaagaactaaaatcagtgacaagtgaagaaaaagcagaatgaaggtaggagtcatgagggagtgctggttt-agctagg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80652571 309 + 95678458 gggttactgagaggac-tcaatgagttaatgagggtaaagtgcttagaacagtatctgataTTAATGCATCATCAGCAGATATAAAGATTAGCTATT---------------TTTATTATGactatgtgccgggcactgttctacacac-tgggaatacaacagactgctgacgaggatcctgatctcagggagcttc----tgttc---agggtt-ggggaggagacagacaac----aa--------acacataacaatcaatgataagaactaaaatcagtgacaagtgaagaaaaagcagaatgaaggtaggagtgacgagggagtgctggtttaagctagg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81078767 309 - 96509753 ggggtactgagaggac-tcaatgagttaatgagggtaaagtgcttagaacagtatctgataTTAATGCATCATCAGCAGATATAAAGATTAGCTATT---------------TTTATTATGactatgtgccgggcactgttctacacac-tgggaatacaacagactgctgacgaggatcctgatctcagggagcttc----tgttc---agggtt-ggggaggagacagacaac----aa--------acacataacaatcaatgataagaactaaaatcagtgacaagtgaagaaaaagcagaatgaaggtaggagtgacgagggagtgctggtttaagctagg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76335940 309 + 90941950 GGGTTACTGAGAGGAC-TCAATGAGTTAATGAgggtaaagtgcttagaacagtatcTGATATTAATGCATCATCAGCAGATACAAagattagctatt---------------tttattatgacTATGTGCCGGGCACTGTTCTACACAC-TGGGAATACAACAGACTGCTGACGAGGATCCTGATCTCAGGGAGCTTC----TGTTC---GGGGTT-GGGGAGGAGACAGACAAC----AA--------ACATATAACAATCAATGATAAGAACTAAAATCAGTGACCAGTGAAGAAAAAGCAGAATGAAGGTAGGAGTGACGAGGGAGTGCTGGTTTAAGCTAGG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18604130 309 + 33263144 gggttactgagaggac-tcaatgagttaatgagggtaaagtgcttagaacagtatctgataTTAATGCATCATCAGCAGATATAAAGATTAGCTATT---------------TTTATTATGactatgtgccgggcactgttctacacac-tgggaatacaacagactgctgacaaggatcctgatctcagggagcttc----tgttc---agggtt-ggggaggagacagacaac----aa--------acatataacaatcaatgataagaactaaaatcagtgacaagtgaagaaaaagcagaatgaaggtaggagtgatgagggagtgctggtttaagctagg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198304346 252 + 210400635 gggttgctgagaggat-tcaatgagttaatgagggcaaagtgcttagaagaatatc---------------------------------------------------------------------agtatctggcactgttctaca--------aatataacaaactgctgatgaagttcctgatctcagggagctta----tgttt---ggggtcagaggaggagacagacaacaaacaa--------acatataaaaatcaatgataagaactaaaatcactgacaagtgaagaaaaagcagaatgaaggtaggactgataagggagtgctggttt-agatagg i calJac3.chr1 C 0 C 0 s mm10.chr15 77148725 253 + 104043685 GAGTTGCCAA----AT-TCAATGATTTGATTTAGGTAAAGCGCTGAGACTGATGCTAGATACTAGTATCACATACTCGCACA-AAGGATTCGCTG------------------CCAGGATGACCA----------ACTGCTCTGGACAA-AGGGA-------AGACTACTTACAAGGTTCCTGACCTCATGGTGCTTA-------------------GGAGATGAGAGAGACAAT------------------------------GATAAGCACTAAGACCAGCAGCAAGAGGATGAAAGGAAGGGTGGAGAGCAGAGGCA-GACAGAGGGCTAACTT-TGATGGG i mm10.chr15 I 966 I 32 s canFam3.chr10 40927533 329 - 69331447 gggatgtgcagaggatgtaaatgagctaatgtagataaagagtttagcccagtatctgatagtactacatcc----catatgtaaagATTAGCTGATTAGCTATCTTATGACTCCATTATGactgcatgccaggcacagttctagacacttgagtacacaacagactgttgacaagttccccgacctcacagggcttaatagtctttggaggggttggttggtggcacagaaaatgaacaaacaaatacacatataacaagtaatgataagcactaaaac---tgttaagtgaagaaaaagcaccatatggg--------gtaagggaa-gtcaactg-agatggg i canFam3.chr10 C 0 C 0 a score=182213.000000 s hg38.chr22_KI270876v1_alt 155581 57 + 263666 aaagttaagggagaggtcgcccttgagaagaaatattcaagagtagaacaaaccata s panTro4.chr22 34533486 57 + 49737984 aaagttaagggagaggtcgcccttgagaagaaatattcaagagtagaacaaaccata i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30947387 57 + 46535552 aaagttaagggagaggtctcccttgagaagaaatattcaagagtagaacaaacctta i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100499306 57 - 115148730 gaagttaagggagaggtctcccttgagaagaaatatttgagagtagaacaaaccata i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80652880 57 + 95678458 aaagttaagggaaaggtctcccttgagaagaaatattcgagagtagaacaaaccaca i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81079076 57 - 96509753 aaagttaagggaaaggtctcccttgagaagaaatattcgagagtagaacaaaccaca i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76336249 57 + 90941950 AAAGTTAAGGGAAAGGTCTCCCTTGAGAAGAAATATTCGAGAGTAGAACAAACTACA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18604439 57 + 33263144 aaagttaagggaaaggtctcccttgagaagaaatactcgagagtagaaccaaccaca i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198304598 57 + 210400635 aaagttaagggagaggtttcccttgagaagtaatattcaagagtagagcaagccata i calJac3.chr1 C 0 C 0 s canFam3.chr10 40927862 38 - 69331447 acggccaagggaaagctcgcccttgagaag-------------------aagccatg i canFam3.chr10 C 0 C 0 e mm10.chr15 77148978 32 + 104043685 I a score=1069815.000000 s hg38.chr22_KI270876v1_alt 155638 308 + 263666 tgggtacc--agtgggaaga-cattttgggcagggagaaaa------------------------gcagaagggtcctgagcaggagggtcttaggcatgttaagagaacagcaaagaggccagtgtcattagaatgaaatacagaaagaaaaggatggcaggagatgagactagagagacagccaggttcctgatcatgcagggtcacag--------------------gattttattcagagactgaaggggag-caact-gtaaggtat-aagcacaggaatgac-aaaatcagacttgcattttaaatgattcactc-tgg--cA--ATGACCTCTAATGAATTA------------GT----------------TTCCTGAATTTA s panTro4.chr22 34533543 308 + 49737984 tgggtacc--agcgggaaga-cattttgggcagggagaaaa------------------------gcagaagggtcctgagcaggagggtcttaggcatgttaagagaacagcaaagaggccagtgtcattagaatgaaatacagaaagaaaaggatggcaggagatgagactagacagacagccaggttcctgatcatgcagggtcacag--------------------gattttattcagagactgaaggggag-caact-gtaaggtat-aagcacaggaatgac-aaaatcagacttgcattttaaatgattcactc-tgg--cA--ATGACCTCTAATGAATTA------------TT----------------TTCCTGAATTTA i panTro4.chr22 C 0 M 584 s ponAbe2.chr22 30947444 309 + 46535552 tgggtacc--agcgggaagagcattttgggcagggagaaaa------------------------gcagaaggatcctgagcaggagggtctcaggtatgttaagagaacagcaaagaggccagtgtcattagaatgaaatacagaaagaagaggatggcaggagatgagactagagagacagccaggttcctgatcatgcagggtcacag--------------------gattttattcagagactgaaggggag-caact-gtaaggtat-aagcacaggaatgac-aaaatcagacttgcattttaaatgattcactc-tgg--cA--ATGACCTCTAATGAATTC------------GT----------------TTCCTGAATTTA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100499363 293 - 115148730 tgggtacc--agtgggaagagcattttgggcagggagaaaa------------------------gcagaagggtcctgagcaggagggtctcaggtatgttaagagaacagcaaagaggccagtgtcattagaatgaaataaataaagaaaaggatggcaggagatgagactagagagacagccaggttcctgattatgcagggtcacag--------------------gattttattcagagactgaaggggag-caact-gtaaggtat-aagcacaggaatgac-aaaatca----------------gattcaCTC-TGG--CA--ATGACCTCTAATGAATTA------------GT----------------TTCCTGAATTTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80652937 309 + 95678458 tgggtacc--agtgggaagagcattttgggcacgcagcaaa------------------------gcagaagggtcctaagaaggagggtctcaggtatgttaagagaacagcaaagaggccagggtcattagaatgaaatacagcaagaaaaggatggcaggagatgaggctggagagacagccagatttctgatcatgcagggtcacag--------------------gattttattcagagactgaaggggag-caact-gcaaggtat-aaacacaggaatgac-aaaatcagacttgcattttaaatgactcactc-tgg--cA--ATGACCTCTAATGAATTA------------GT----------------TTCCTGAATTTA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81079133 309 - 96509753 tgggtacc--agtgggaagagcattttgggcacgcagcaaa------------------------gcagaagggtcctaagaaggagggtctcaggtatgttaagagaacagcaaagaggccagggtcattagaatgaaatacagcaagaaaaggatggcaggagatgaggctggagagacagccagatttctgatcatgcagggtcacag--------------------gattttattcagagactgaaggggag-caact-gcaaggtat-aaacacaggaatgac-aaaatcagacttgcattttaaatgactcactc-tgg--cA--ATGACCTCTAATGAATTA------------GT----------------TTCCTGAATTTA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76336306 309 + 90941950 TGGGTACC--AGTGGGAAGAGCATTTTGGGCACGCAGCAAA------------------------GCAGAAGGGTCCTAAGAAGGAGGGTCTCAGGTATGTTAAGAGAACAGCAAAGAGGCCAGTGTCATTAGAATGAAATACAGCAAGAAAAGGATGgcaggagatgaggctggagagataGCCAGATTTCTGATCATGCAGGGTCACAG--------------------GATTTTATTCAGAGACTGAAGGGGAG-CAACT-GCAAGGTAT-AAACACAGGAATGAC-AAAATCAGACTTGCATTTTAAATGACTCACTC-TGG--CA--ATGACCTCTAATGAATTA------------GT----------------TTCCTGAATTTA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18604496 309 + 33263144 tgggtacc--agtaggaagagcattttgggcacgcagcaaa------------------------gcagaagggtcctaagcaggagggtctcaggtatgttaagagaacagcaaagaggccagtgtcattagaatgaaatacagcaagaaaaggatggcaggagatgaggctggagagacagccagatttctgatcatgcaggatcacag--------------------gattttattcagagactgaaggggag-caact-gtaaggtat-aaacacaggaatgac-aaaatcagacttgcattttaaagtactcactc-tgg--cA--ATGACCTCTAATGAATTA------------GT----------------TTCCTGAATTTA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198304655 330 + 210400635 tgggtacc--agtgggaagagcattttgggcagagagaaaa------------------------gcagaagg-tcctgagtaggagggtatcaggtgtgttaagagaacagcaaagaggcctgtgtcactggaataaaatacagaaagaaaaggatggcaggagatgaggctggagagacagccaggttcctgatcatgcagggtcttagagacctttgtaaggccaaacgattttatttagagactgaaagggag-caact-gtaaggtat-aagcacaggaatgac-aaaatcagacttgcatttcaaatgattcactc-tggcACA--ATGACCTCTAATGAATTA------------GT----------------TTCCTGAATTTA i calJac3.chr1 C 0 C 0 s mm10.chr15 77149010 295 + 104043685 ------------TGGGTAGAACAC----AGCAGAGAGGCAA------------------------GAGGAAAGGCCT--GGCAGG-GGGTGTGAGGTGTTTCAAGGAAACAGCCATG-GACCAGGACAATCAGAGTGGAATCTGGGTACA------------GAGATGAGGCTGGACAAA----CAGGTTCCTGACCATGTAGGGCCTTGG-GGGATTGGAATGGACGCGTGATTCTACTT-----------GGGAG---GCT-GAAAGGTTC-AAGCTCAAAACGGACAAAAATCAGA----TGCTTTAGGTGAGTAACCCTTGG--CA--GGGTCCTCTAAGGAACTG------------GCTATGCGACTCCAGGGGTTCCTGAATTTA i mm10.chr15 I 32 C 0 s canFam3.chr10 40927900 365 - 69331447 tggttatcttggtgggaagagcatttcaggcagagaaaaaaaaaaaaaaaaaaaaaaaaacagggaaagaaaggccctgagcaagaggatacaaggtgtgttaagagactagcaaagaggccagcgtcactggagcaaaatgtgggaagagaag--------gagagaagtctggggatcaaggcaggctcctgaccacgcagggcctcagagaccaaaataaggacactggattttattctgagtctgctggggaaacaaccgggaaggtttaaagcacaggaatgacaaaaatcagacttgcgctttagagaactggctc-tgT--TAAGATGATCTCTGATGAATTATTCGACTCTTAGGT----------------TCCCTAAATGTA i canFam3.chr10 C 0 C 0 a score=924006.000000 s hg38.chr22_KI270876v1_alt 155946 321 + 263666 ATCATTCTAATAGTAATAGAGAAACATTTAAGAGTCTGGGGAATAGACACAATACATTGTGATGGCAGAATGCAGCATTTCTCACTGCCTAG--AAGA-GGTTGAACA-----------CTGGAGCCCACTAAGAAAGGTGCTACAATCAAAAGAGCAAAGTATTTACTGCAGGGGAGCCTTGTATTTGTGCCTGGCAAATTTCACATACAAAATGTTGGGAGGAAATGTTCAAA--AAAGATTTGACAGTGGTT-T-GGAAATGTT-GAAAAAAA-AGAGTGAGGAATTATGACTTCGGAAGGGAACA-TGTGGGATACCAATAATGTCAGATCCCGGAGA s ponAbe2.chr22 30947753 322 + 46535552 ATCATTCTAATAGTAATAGAGAAACATTTAAGAGTCTGGGAAATAGACACAATACATCGTGATGGCAGAATGCAGCATTTCTCACTGCCTAG--AAGA-AGTTGAACA-----------CTGGAGTCCACTAAGAAAGGTGCTACAATCAAAAGAGCAAAGTATTTACTGCAGGGGAGCCTTCTATTTGTGCCTGGCAGATTTCACATACAAAATGTTGGGAGGAAATGTTCAAA--AAAGATTTGACAGTGGTT-T-GGAAATGTT-GAAAAAAAGAGAGTGAGGAATTATGACTTCAGAAGGGAACA-TGTAGGATAACAATAATGTCAGATCCCGGAGA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100499656 321 - 115148730 ATCATTCTAATAGTAATAGAGAAACATTTAAGAGTCTGGGAAATAGACACAATACATCGTGATGGCAGAATGCAGCATTTCTCACTGCCTAG--AAGA-GGTTGAACA-----------CTGGAGCCCACTAAGAAAGGTGCTACAATCAAAAGAGCAAAATATTTACTGCAGGGGAGCCTTCTATTTGTGCCTGGCAGATTTCACATACAAAATGTTGGGAGGAAATGTTCAAA--AAAGATTTGACAGTGGTT-T-GGAAATGTT-GAAAAAAA-AGAGTGAGGAATTATAACTTCAGAAGGGAACA-TGTGGGATACCAATAATGTCAGATCCCGGAGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80653246 321 + 95678458 ATCATTCTAATAGTAATAGAGAAACATGTAAGAGTCTGGGAAATAGACACAATACATCGTGATGGCAGAATGCAGCATTTCTGACCGCCTAG--AAGA-GGCTGAACA-----------CTGGAGCCCGCTAAGAAGGGTGCTACAATCAAAAGAGCAAAATATTTACTGCAGGGGAGCCTTCTATTTGTGCCTGGCAGATTTCACATACAAAATGTTGGGAGGAAACGTTCAAA--AAAGATTTGACAGTGGTT-T-GGAAATGTT-GAAAACAA-AGAGTGAGGAATTATGACTTCAGAAGGGAACG-TGTGGGATACCAATAATGTCAGATCCCAGAGA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81079442 321 - 96509753 ATCATTCTAATAGTAATAGAGAAACATGTAAGAGTCTGGGAAATAGACACAATACATCGTGATGGCAGAATGCAGCATTTCTGACCGCCTAG--AAGA-GGCTGAACA-----------CTGGAGCCCGCTAAGAAGGGTGCTACAATCAAAAGAGCAAAATATTTACTGCAGGGGAGCCTTCTATTTGTGCCTGGCAGATTTCACATACAAAATGTTGGGAGGAAACGTTCAAA--AAAGATTTGACAGTGGTT-T-GGAAATGTT-GAAAACAA-AGAGTGAGGAATTATGACTTCAGAAGGGAACG-TGTGGGATACCAATAATGTCAGATCCCAGAGA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76336615 321 + 90941950 ATCATTCTAATAGTAATAGAGAAACATGTAAGAGTCTGGGAAATAGACACAATACATCGTGATGGCAGAATGCAGCATTTCTGACTGCCTAG--AAGA-GGCTGAACA-----------CTGGAGCCCACTAAGAAGGGTGCTACAATCAAAAGAGCAAAGTATTTACTGCAGGGGAGCCTTCTATTTGTGCCTGGCAGATTTCACATACAAAATGTTGGGAGGAAACGTTCAAA--AAAGATTTGACAGTGGTT-T-GGAAATGTT-GAAAACAA-AGAGTGAGGAATTATGACTTCAGAAGGGAACG-TGTGGGATACCAATAATGTCAGATCCCAGAGA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18604805 321 + 33263144 ATCATTCTAATAGTAATAGAGAAACATGTAAGAGTCTGGGAAACAGACACAATACATCGTGATGGCAGAATGCAGCATTTCTGACTGCCTAG--AAGA-GGCTGAACA-----------CTGGAGCCTGCTAAGAAAGGTGCTACAATCAAAAGAGCAAAGTATTTACTGCAGGGGAGCCTTCTATTTGTGCCTGGCAGATTTCACATACAAAATGTTGGGAGGAAACGTTCAAA--AAAGATTTGACAGTGGTT-T-GGAAATGCT-GAAAACAA-AGAGTGAGGAATTATGACTTCAGAAGGGAACA-TGTGGGATACCAATAATGTCAGATCCCAGAGA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198304985 318 + 210400635 ----ATCTAATAGTAATAGAGAAACATTTCAGACTGTGGGAAATAGACACAATACATCGTGATGGCAGAATGCAGCATTTCTGACTGCCTAG--AAGA-AGCTGAACA-----------CTAGAGCCCACTAATAAAGGTGCTACAATCAAAAGAGCAAAGTATTTGCTGCAGGGGAGCATTCTACTTGTGTCTGGCAGACTTCAAGTACAAAGTGTTGGGAGGAAATGTTTAAA--AAAGATTTGACAGTGGTT-T-GGAAATGTTGGAAAAAAA-AGAGTGAGGAATTATGACTTCAGAAGGGAACA-TGTGGGATACCAATAATGTCAGATTCCAGAGA i calJac3.chr1 C 0 I 1 s mm10.chr15 77149305 299 + 104043685 ATCACTCTAAAAGTAACAAAGGAA----TACAAGTCT-AGAAATGGA-ATGACGTGCCTCAGTGTAAGGCCGCA-----TCTGACTGCCTAG--AAGATAGCTGAGCCCCCCTACCCCTCCCAAGTTCAAGAACGAAGGTACTGCCATCCAAACAGTAGAGTTTTCCCT--AGGAAGCCACTGTGACTGTGAGGGGCAGAGTCCATGTACAACCTGTGTGGTGG-------------CAAGAACTGACAGTAGTT-TCAGAAATGTCAGGGGACAC-TGAGAGAGGACTTGTGGCTCTACAATCAAGCA-TGCGCAGT------------AGATCCCTAAGA i mm10.chr15 C 0 C 0 s canFam3.chr10 40928265 325 - 69331447 ATCATTCTCATAGAAACAGAGGAACATG-AAGTGCCTGGGAAATGGCAACCCCAGAGCATGATGGCAGACCACAGTATTTCCAACTGCTAAGCCCCGA-GGCTGAGCA-----------CCAAAGCCCAATAATAAAGCTGTTCTGTTCAAAAAAGCAAAGCGTGGACGGCAGGGGTACATCCCATTTCGGTTTGTTGGATTTCATGGACCAAATATTGGGAAGGAA-GTTTAAAGGAAAGATTTGACAGTGGTTCT-GGAAACATG-AAACAGAA-AGGGTGAGAGATTATGGCTCCAGAAGGGAATGCCTTGGGACACCAACAATGTGAGGTTCCTGAGA i canFam3.chr10 C 0 C 0 e panTro4.chr22 34533851 584 + 49737984 M a score=6824356.000000 s hg38.chr22_KI270876v1_alt 156267 1759 + 263666 ---GGAATGGTATACCAGAAGGAGACCAGGGTGGGTAAGG--GGGGGCTGTATCACCTAGTATGACTGGTTCCCA-GAAAC--TATCTGTCTACCATAAACAGATGTCCAAGAAACAACCCCTAGGTAAGGAATTACATGATGAAAAGTT-------------CAAATTTGAG--------------------------AGAGATAAAATTGTTTACATATGGCAATCTGTGTAGATCAGAGTTTGGAATTTCTCAGGGGAGAACAGAAAACTGGAGGAACAAAACCAGGAATTTGAGCTTATGCCTTATCACTGAGAGGAATGAGGAATGTCAT-TACTGTTCAATATGAAGATGTCTCCTGTAGCAATACAAATTTAAGTAATAGGTTGTCAAATATTAAGCTTACCT----AGACTCAATTGCaaagctaaggagaaagataaagg--aaaaaatagagaagggggcc-aaaaaagaaagagaaaAGTGTGTGTGATTAGGGGGTG--------------------ACTAAGACGG-AAAAAACAATTTAATGAGTCAAGATTGCTCGGATTTCATCATAGCTT----CATTTATGAAATTCTGTTTATCTTTTCAAGAAAGCTAAGTAATTTTTAGAAAAGCAA-TACTTTTCAAGAGACAATCTTGGCCTCAGCGAAGAAATGATTATAACTGAAGATATGGAGCAATGTAGAAGAATTCAGAAAGAAACCAAATCTCTGGAAAAAGTGAGGC------------TTTTTTTTTTCATTGTAAAGGAACATAAATTCAGTCTCCAACCCACAATCCCCGCCTATCCTCCAACT-CCCC--AAATCCTGCAAAGCCCATAGAAAGTGGAAAGTGTGCCAAAACAAACAGTGT-GGCTGCAGCTCCGTGGATGAAGGGTGGGATAAGGTTCGAGTGGCAAGGGAGCATGACTGGCAGGCAAC------CGAATGGAATCACTTTAAAGCAGTGCCACAAAATGGAGACTAAA-TGCTGAGAGGACCTCCAGAATTCAAAGAAAATGGGATATGCTT-AGCAAAATCACAGAATAGATTCTCTACTCCAACTCCTTTC-AAAAACCAGACaaacaaaaac--aggaaaagagaaaatgaaacaaagcaaaacaTACCTGCTCTCTTATCTGTCTTTAATTAAAGCATAAAATACCCTCCCTCTTCTCTTCT-CCCAACCACCCAGGAACAGAAGAGCGAACTGGCAGCAGCTCAGGTGAAAGACTTCAGCCTTCCAGCTACAAAGAGGGGAGATAGCAGACAATGGAACTGGTGATTCATTACAAAAGAATACACTCCAGA-----G-CGGCCTGCTGCCACATGGACTCACTGCACTATTTAAAGGAACAGCAACCCCCTTTCCAACCTCCCTTATTCCTAACACCTTCCCTCCTCTTGGTCCTGATGGAAAACAGATTTTGAAGAAAATGCCAGCAAAGCACTGAGCTGTCCAAGAAAGGGAGGGCTTTGTGTTCCACAGAAACTGGC------AGTCTTATACCATAGTAGAGTACAAAAATTTTCTTTCACATCCATACTGTAAAATCTTTTCCTCTCTGCCTAGTACACTTTCCCTTTCAACAATAGATAGTATAACTGAATTTGAGTTTGGCTAAACATTTATTTTTTACTAATTAGTGTTGAAGTCA-TTTGCAATTTTGTTTTTCGAATTTTACACATAGTACAAGAATGATTTATCTTTCCT--------TCATATTCCATATTGCTATTTTCATAAATAT---GAGATGCAATAATCTGGTCTATATGCCCAAAAAATA--AGAGATCTCAGTGAAATACTCCTACAACATACACATG---AACAGCCGATAAAATTAACGTTTT s panTro4.chr22 34534448 1761 + 49737984 ---GGAATGGTATACCAGAAGGAGACCAGGGTGGTAAAAGTGGGGGGCTGTATCACCTAGTATGACTGGTTCCCA-GAAAC--TATCTGTCTACCATAAACAGATGTCCAAGAAACAACCCCTAGGTAAGGAATTACATGATGAAAAGTT-------------CAAATTTGAG--------------------------AGAGATAAAATTGTTTACATATGGCAATCTGTGTAGATCAGAGTTTGGAATTTCTCAGGGGAGAACAGGAAACTGGAGGAACGAAAGCAGGAATTGGAGCTTATGCCTTATCACTGAGAGGAATGAGGGATGTCAT-TACTGCTCAATATGAAGGTGTCTCCTGTAGCAACACAAATTTAAGTAATAGGTTGTCAAATATTAAGCTTACCT----AGACTCAATTGCAAAGCTAAGGAGAAAGATAAAGG--AAAAAATAGAGAAGGGGGCC-AAAAAAGAAAGAGAAAAGTGTGTGTGATTAGGGGGGG--------------------ACTAAGACGG-AAAAAACAATTTAATGAGTCAAGATTGCTCGGATTTCATCATAGCTT----CATTTATGAAATTCTGGTTATCTTTTCAAGAAAGCTAAGTAATTTTTAGAAAAGCAA-TACTTTTCAAGAGACAATCTTGGCCTCAGCGAAGAAATGGTTATAACTGAAGATATGGAGCAATGTAGAAGAATTCAGAAAGAAACCAAATCTCTGGAAAAAGTGAGGC------------TTTTTTTTTTCATTGTAAAGGAACATAAATTTAGTCTCCAACCCACAATCCCCGCCTATCCTCCAACT-CCCC--AAATCCTGCAAAGCCCATAGAAAGTGGAAAGTGTGCCAAAACAAACAGTGT-GGCTGCAGCTCCGTGGATGAAGGGTGGGATAAGGTTCGAGTGGCAAGGGAGCATGACTGGCAGGCAAC------CGAATGGAATCACTTTAAAGCAGTGCCACAAAATGGAGACTAAA-TGCTGTGAGGACCTCCAGAATTCAGAGAAAATGGGATATGCTT-AGCAAAATCACAGAATAGATTCTCTACTCCAACTTCTTTC-Aaaaaccagacaaacaaaaac--aggaaaagagaaaatgaaacaaagcaaaacaTACCTGCTCTCTTATCTGTCTTTAATTAAAGCATAAAATACCCTCCCTCTTCTCTTCT-CCCAACCACCCAGGAACAGAAGAGCGAACTGGCAGCAGCTCAGGTGAAAGACTTCAGCCTTCCAGCTACAAAGAGGGGAGATAGCAGACAATAGAACTGGTGATTCATTACAAAAGAATACACTCCAGA-----G-CGGCCTGCTGCCACATGGACTCACTGCACTATTTAAAGGAACAGCAACCCCCTTTCCAACCTCCCTTATTCCTAACACCTTCCCTCCTCTTGGTCCTGATGGAAAACAGATTTTGAAGAAAATGCCAGCAAAGCACTGAGCTGTCCAAGAAAGGGAGGGCTTTGTGTTCCACAGAAACTGGC------AGTCTTATACCATAGTAGAGTACAAAAATTTTCTTTCACATCCATACTGTAAAATCTTTTCCTCTCTGCCTAGTACACTTTCCCTTTCAACAATAGATAGTATAACTGAATTTGAGTTTGGCTAAACATTTATTTTTTACTAATTAGTGTTGAAGTCA-TTTGCAATTTTGTTTTTCGAATTTTACACATAGTACAAGAATGATTTATCTTTCCT--------TCATATTCCATATTGCTATTTTCATAAATAT---GAGATGCAATAATCTGGTCTATATGCCCAAAAAATA--AGAGATCTCAGTGAAATACTCCTACAACATACACATG---AACAGCCGATAAAATTAATGTTTT i panTro4.chr22 M 584 C 0 s ponAbe2.chr22 30948075 1760 + 46535552 ---GGAATGGTATACCAGAAGGAGACCAGGGTGGGTAAAG--GGGGGCTGTATCATCTAGTATGACTGGTTCCCA-GAAAC--TATTTGTCTACCATAAACAGATGTCCAAGAAACAACCCCTAGGTAAGGAATTACATGATGAAAAGTT-------------CAAATTT--G--------------------------AGAGATAAAATTGTTTGCATATGGCAATCTGTGTAGATCAGAGTTTGGAATTTCTCAGGGGAGAACAGAAAACTGGAGGAACAAAACCAGGAATTTGAGTTTGTGCCTTATCACTGACAGGAATGAGGAATGTCAT-CACTGTTCAATATGAAGATGTCTCCTGTAGCAATACGAATTTAAGTAATAGGTTGTCAAATATTAAGCTTACCT----AGACTCAATTGCAAAACTAAGGAGAAAGATAAAGG--AAAAAATCGAGAAGGGGGCC-AAAAAAGAAAGAGAAAAGTGTGTGTGATTAGGGGGTG--------------------ACTAAGACGG-AAAAAACAATTTAAGGAGTCAAGATTGCTCGGATTTCATCATAGCTTGAAGCATTTATGAAATTCTGGTTATCTTTTCAAGAAAGCTAAGTAATTTTTAGAAAAGCAA-TAC-TTTCAAGAGACAATCTTGGCCTCAGCGAGGAAATGGTTATAACTGAAGACGTGCAGCAATGAAGAAGAATTCAGAAAGAAACCAAATCTCTGGAAAAAGTGAGGC-----------TTTTTTTTTTTCATTGTAAAGGAACATAAATTTAGTCTCCAACCCACAATCCCCGCCTATCCTCTAACT-CCCC--AAATCCTGCAAAGCCCATAGAAAGTGGAAAGTGTGCCAAAACAAACAGTGT-GGCTGCAGCTCCGTGGATGAAGGGTGGGATAAGGTTCGAGTGGCAAGGGAGCATGACTGGCAGGCAAC------CGAATGGAATCACTTTAAAGCAGTGCCACAAAATGGAGACTAAA-TGCTGTGAGGACCTCCAGAATTCAGAGAAAATGGGATATGCTT-AGCAAAATCACAGAATAGATTCTCTACTCCAACTCCTTTC-Aaaaaccagacaaacaaaaac--aggaaaagagaaaatgaaacaaagcaaaacaTACCTGCTCTCTTATCTGTCTTTAATTAAAGCATAAAATACCCTCCCTCTTCTCTTCT-CCCAACCACCCAGGAACAGAAGAGCGAACTGGCAGCAGCTCAGGTGAAAGACTTCAGCCTTCCAGCTACAAAGAGGGGAGATAGCAGACAATGGAACTGGTGATTCATTACAAAAGAATACACTCCAGA-----G-CGGCCTGCTGCCACATGGACTCACTGCACTATTTAAAGGAACAGCAACCCCCTTTCCAACCTCCCTTATTCCTAACACCTTCCCTCCTCTTGGTCCTGATGGAAAACAGATTTTGAAGAAAATGCCAGCAAAGCACTGAGCTGTCCAAGAAAGGGAGGGCTTTGTGTTCCACAGAAACTGGC------AGTCTTATATCACAGTAGAGTATAAAAATTTTCTTTCACATCCATACTCTAAAATCTTTTCCTCTCTGTCTAGTACACTTTGCCTTTCAACAATAGATAGTATAACTGAATTTGAGTTTGGCTAAACATTTATTTTTTACTAATTAGTGTTGAAGTCA-TTTACAATTTTGTTTTTCAAATTTTACACATAGTACAAGAATGATTTATCTTTCCT--------TCATATTCCATATTGCTATTTTCATAAATAT---GAGATGCAATAATCTGGTCTATTTGCCC-AAAAATA--AGAGATCTCAGTGAACTACTCCTACAACATATACATG---AACAGCTGACACAATTAATGTTTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100499977 1767 - 115148730 ---GGTATGGTATACCAGAAGGAGACCAGGGTGGGTAAA---GGGGGCTGTATCATCTAGTATGACTGGTTCCCA-GAAAC--TATCTGTCTATCATAAACAGATGTCCAAGAAACAACCCCTAGGTAAGGAATTACATGATGAAAAGTT-------------CAAATTTGAG--------------------------AGAGATAAAATTGTTTACATATGGCAATCTGTGTAGATCAGAGTTTGGAATTTCTCAGGGGAGAACAGAAAACTGGAGGAACAAAACCAGGAATTTGAGCTTATGCCTTATCACTGAGAGGAATGAGGAATGTCAT-TACTGTTCAATATGAAGATGTCTTCTGTAGCAATACAAATTTAAGTAATAGGTTGTCAAATATTAAGCTTACCT----AGACTCAACTGCAAAACTACGGAGAAAGATAAAGG--AAAAAATAGAGAAGGGGGCC-AAAAAAGAAAGAGAAAAGTGTGTGTGATTAGGGGGTG--------------------ACTAAGACAG-AAAAAACAATTTAATGAGTCAAGATTGCTCGGATTTTATCATAGATT----CATTTATGAAATTCTGGTTATCTTTTCAAGAAAGCTAAGTAATTTTTAGAAAAGCAA-TACTTTCCAAGAGACAATCTTGGCCTCAGCGAGGAAATGGTTATAACTGAAGATATGGAGCAATGCAGAAGAATTCAGAAAGAAACCAAATCTCTGGAAAAAGTGAGGC--------TTTTTTTTTTTTTTCATTGTAAAGGAACATAAATTTAGTCTCCAACCCACAATCCCCGCCTATCCTCCAACT-CCCC--AAATCCTGCAAAGCCCATAGAAAGTGGAAAGTGTGCCAAAACTAACAGTGT-GGTTGCAGCTCCCTGGATGAAGGGTGGGATAAGGTTCCAGTGGCAAGGCAGCATGACTGGCAGGCAAC------CGAATGGAATCACTTTAAAGCAGTGCCACAAAATGGAGACTAAA-CGCTATGAGGACCTCCAGAATTCAGAGAAAATGGGATATGCTT-AGCAAAATCACAGAATAGATTCTCTACTCCAACTCCTTTC-AAAAACCAGACAAACAAAAAC--AGGAAAAGAGAAAATGAAACAAAGCAAAACATACCTGCTCTCTTATCTGTCTTTAATTAAAGCATAAAATACCCTCCCTCTTCTCTTCT-CCCAACCACCCAGGAACAGAAGAGCGAACTGGCAGCAGCTCAGGTGAAAGACTTCAGCCTTCCAGCTACAAAGAGGGGAGATAGCAGACAATGGAACTGGTGATTCATTACAAAAGAATACACTCCAGA-----G-CGGCCTGCTGCCACATGGACTCACTGCACTATTTAAAGGAACAGCAACCCCCTTTCCAACCTCCCTTATTCCTAACACCTTCCCTCCTCTTGGTCCTGATGGAAAACAGATTTTGAAGAAAATGCCAGCGAAGCACTGAGCTGTCCAAGAAAGGGAGGGCTTTGTGTTCCACAGAAACTGGCAGTCTTAGTCTTATACCATAGTAGAGTACAAAAATTTTCTTTCACATCCATACTGTAAAATCTTTTCCTCTCTGCCTAGTACACTTTCCTTTTCAACAATAGATAGTATAACGGAATTTGAGTTTGGCTAAACATTTATTTTTTGCTAATTAGTGTTGAAGTCA-CTTGCAATTTTGTTTTTCGAATTTTACACATAGTACAAGAATGATTTATCTTTCCT--------TCATATTCCATATTGCTATTTTCATAAATAT---GAGATGCAATAATCTGGTCTATATGCCC-AAAAATA--AGAGATCTCAGTGAAATACTCCTACAACATATACATG---AACAGCCGATAAAATTAATGTTTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80653567 1756 + 95678458 ---GGAACGCTATACCAGAAGGAGACCAGGGTGGGTAAA---GGGTGCTGTAGCATCTAGTATGACTGGTTCCCA-GAAAC--TATCTGTCTATTATAAACAGATGTCCAAGAAACAATCCCTAGGTAAGGAATTCCATGATGAAAAGTT-------------CAAATTTGAG--------------------------AGAGATAAAATTGTTGGCATATGGCAATCTGTGTAGATCAGAGTTTGGAATTTCTCAGGGGAGAACAGAAAACTGGAGGAACAAAACCAGGAATTTGAGCTTACGCCTTATCACTGAGAGGAATGAGGAATGTCAT-TACCGTTCAATATGAAGATGTCTTCTGTAGCAATACAAATTTAAGTAGTAGGTTGTCAAATATTAAGCTTACCT----AGACCCAACTGCAAAACTAAGGagaaagataaagg--gaaaaaaagagaaaaggggcaaaaaaagaaagaaaaaaGTGTGTGTGATTAGGGGGTG--------------------ACTAAGACGG-AAAAAACAATTTAATGAGTCAAGAGTGCTTGGATTTCATCATAGCTT----CATTTATGAAATTCTGGGTATCTTTTCAAGAAAGTTAAGTAATTTTTAGAAAAGCGA-TACTTTTCAAGAGACAATCTTGGCCTCGGCGAGGAAATGGTTATAACTAAAGATATGGAGCAATGTAGAAGAATTCAGAAAGAAACCAAATCTCTGGAAAAAGTGAGGC--------------TTTTTTTTCATTGTAAAGGAACATAAATTTAGTCTCCAACCCACAATCCTCGCCTATCCTCCAACT-CCCC--AAATCCTGCAAAGCCCATAGAAAGTGGATAGTGTGCCAAAACAAACAGTGT-GGCTGCAGCTGCGTGGATGAAGGGTGGGATGAGGTTCGAGTGGCAAGGGAGCATGACTGGCAGGCAAC------CGAATGGAATCACTTTAAAGCAGTACCACAAAATGGAGACTAAA-TGCTGTGAGGACCTCCAGAATTCAGAGAAAATGGGATATGCTT-AGCAAAATCACAGAATAGATTCTCTACTCCAATTCCTTTC-Aaaaaccagacaaacaaaaac--aggaaaagagaaaatgaaacaaagcaaaacaTACCTGCTCTCTTATCTGTCTTTAATTAAAGCATAAAATACCCTCCCTCTTCTCTTCT-CCCAACCACCCAGGAACAGAAGAGCGAACTGGCAGCAGCTCAGGTGAAAGACTTCAGCCTTCCAGCTACAAAGAGGGGAGATAGCAGACAATGGAACTGGTGATTCATTACAAAAGAATACACTCCAGA-----G-CGGCCTGCTGCCACATGGACTCACTGCACTATTTAAAGGAACAGCAACCCCCTTTCCAACCTCCCTTATTCCTAACACCTTCCCTCCTCTTGGTCCTGATGGAAAACAGATTTTGAAGAAAATGCCAGCAAAGCACTGAGCTGTCCAAGAAAGGGAGGGCTTTGTGTTCCACAGAAACTGGC------AGTCTTATACCACAGTAGAGTACAAAAATTTTCTTTCACATCCATACTGTAAAATCCTTTCCTCTCTGCCTAGTCCACTTGCCCTTTCAACAATAGACAGTATAACTGAGTTTGAGTTTGGCTAAACATTTATTTTTTACTAATTAGTGTTGAAGTCA-TTTGCAATTTTGTTTTTCGAATTTTACACATAGTACAAGAATGATTTATCTTTCCT--------TCATATTCTACGTTGCTATTTTCATAAATAT---GAGATGCAATAATCTGGTCATTATGCCC-AAAAATA--AGAGATCTCAGTGAAATACTCCTACAACATATACATG---AACAGCCGATAAAATTAATGTTTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81079763 1756 - 96509753 ---GGAACGGTATACCAGAAGGAGACCAGGGTGGGTAAA---GGGTGCTGTAGCATCTAGTATGACTGGTTCCCA-GAAAC--TATCTGTCTATTATAAACAGATGTCCAAGAAACAATCCCTAGGTAAGGAATTCCATGATGAAAAGTT-------------CAAATTTGAG--------------------------AGAGATAAAATTGTTTGCATATGGCAATCTGTGTAGATCAGAGTTTGGAATTTCTCAGGGGAGAATAGAAAACTGGAGGAACAAAACCAGGAATTTGAGCTTATGCCTTATCACTGAGAGGAATGAGGAATGTCAT-TACCGTTCAATATGAAGATGTCTTCTGTAGCAATACAAATTTAAGTAGTAGGTTGTCAAATATTAAGCTTACCT----AGACCCAACTGCAAAACTAAGGAGAAAGATAAAGG--GAAAAAAAGAGAAAAGGGGCAAAAAAAGAAAGAAAAAAGTGTGTGTGATTAGGGGGTG--------------------ACTAAGACGG-AAAAAACAATTTAATGAGTCAAGAGTGCTTGGATTTCATCATAGCTT----CATTTATGAAATTCTGGGTATCTTTTCAAGAAAGTTAAGTAATTTTTAGAAAAGCGA-TACTTTTCAAGAGACAATCTTGGCCTCGGCGAGGAAATGGTTATAACTAAAGATATGGAGCAATGTAGAAGAATTCAGAAAGAAACCAAATCTCTGGAAAAAGTGAGGC--------------TTTTTTTTCATTGTAAAGGAACATAAATTTAGTCTCCAACCCACAATCCTCGCCTATCCTCCAACT-CCCC--AAATCCTGCAAAGCCCATAGAAAGTGGATAGTGTGCCAAAACAAACAGTGT-GGCTGCAGCTGCGTGGATGAAGGGTGGGATGAGGTTCGAGTGGCAAGGGAGCATGACTGGCAGGCAAC------CGAATGGAATCACTTTAAAGCAGTACCACAAAATGGAGACTAAA-TGCTGTGAGGACCTCCAGAATTCAGAGAAAATGGGATATGCTT-AGCAAAATCACAGAATAGATTCTCTACTCCAATTCCTTTC-AAAAACCAGACAAACAAAAAC--AGGAAAAGAGAAAATGAAACAAAGCAAAACATACCTGCTCTCTTATCTGTCTTTAATTAAAGCATAAAATACCCTCCCTCTTCTCTTCT-CCCAACCACCCAGGAACACAAGAGCGAACTGGCAGCAGCTCAGGTGAAAGACTTCAGCCTTCCAGCTACAAAGAGGGGAGATAGCAGACAATGGAACTGGTGATTCATTACAAAAGAATACACTCCAGA-----G-CGGCCTGCTGCCACATGGACTCACTGCACTATTTAAAGGAACAGCAACCCCCTTTCCAACCTCCCTTATTCCTAACACCTTCCCTCCTCTTGGTCCTGATGGAAAACAGATTTTGAAGAAAATGCCAGCAAAGCACTGAGCTGTCCAAGAAAGGGAGGGCTTTGTGTTCCACAGAAACTGGC------AGTCTTATACCACAGTAGAGTACAAAAATTTTCTTTCACATCCATACTGTAAAATCCTTTCCTCTCTGCCTAGTCCACTTGCCCTTTCAACAATAGACAGTATAACTGAGTTTGAGTTTGGCTAAACATTTATTTTTTACTAATTAGTGTTGAAGTCA-TTTGCAATTTTGTTTTTCGAATTTTACACATAGTACAAGAATGATTTATCTTTCCT--------TCATATTCTACATTGCTATTTTCATAAATAT---GAGATGCAATAATCTGGTCATTATGCCC-AAAAATA--AGAGATCTCAGTGAAATACTCCTACAACATATACATG---AACAGCCGATAAAATTAATGTTTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76336936 1756 + 90941950 ---GGAACGGTATACCAGAAGGAGACCAGGGTGGGTAAA---GGGTGCTGTAGCATCTAGTATGACTGGTTCCCA-GAAAC--TATCTGTCTATTATAAACAGATGTCCAAGAAACAATCCCTAGGTAAGGAATTCCATGATGAAAAGTT-------------CAAATTTGAG--------------------------AGAGATAAAATTGTTTGCATATGGCAATCTGTGTAGATCAGAGTTTGGAATTTCTCAGGGGAGAATAGAAAACTGGAGGAACAAAACCAGGAATTTGAGCTTACGCCTTATCACTGAGAGGAATGAGGAATGTCAT-TACCGTTCAATATGAAGATGTCTTCTGTAGCAATACAAATTTAAGTAGTAGGTTGTCAAATATTAAGCTTACCT----AGACCCAACTGCaaaactaaggagaaagataaagg--gaaaaaaagagaaaaggggcaaaaaaagaaagaaaaaagtgtgtgCGATTAGGGGGTG--------------------ACTAAGACgg-aaaaaacaatttaatgaGTCAAGAGTGCTTGGATTTCATCATAGCTT----CATTTATGAAATTCTGGGTATCTTTTCAAGAAAGTTAAGTAATTTTTAGAAAAGCAA-TACTTTTCAAGAGACAATCTTGGCCTCGGCGAGGAAATGGTTATAACTAAAGATATGGAGCAATGTAGAAGAATTCAGAAAGAAACCAAATCTCTGGAAAAAGTGAggc--------------ttttttttcattgtaaaggAACATAAATTTAGTCTCCAACCCACAATCCTCGCCTATCCTCCAACT-CCCC--AAATCCTGCAAAGCCCATAGAAAGTGGATAGTGTGCCAAAACAAACAGTGT-GGCTGCAGCTGCGTGGATGAAGGGTGGGATGAGGTTCGAGTGGCAAGGGAGCATGACTGGCAGGCAAC------CGAATGGAATCACTTTAAAGCAGTACCACAAAATGGAGACTAAA-TGCTGTGAGGACCTCCAGAATTCAGAGAAAATGGGATATGCTT-AGCAAAATCACAGAATAGATTCTCTACTCCAATTCCTTTc-aaaaaccagacaaacaaaaac--aggaaaagagaaaatgaaacaaagcaaaacataccTGCTCTCTTATCTGTCTTTAATTAAAGCATAAAATaccctccctcttctcttct-cccaaccacccaggaacagaagagcAAACTGGCAGCAGCTCAGGTGAAAGACTTCAGCCTTCCAGCTACAAAGAGGGGAGATAGCAGACAATGGAACTGGTGATTCATTACAAAAGAATACACTCCAGA-----G-CGGCCTGCTGCCACATGGACTCACTGCACTATTTAAAGGAACAGCAACCCCCTTTCCAACCTCCCTTATTCCTAACACCTTCCCTCCTCTTGGTCCTGATGGAAAACAGATTTTGAAGAAAATGCCAGCAAAGCACTGAGCTGTCCAAGAAAGGGAGGGCTTTGTGTTCCACAGAAACTGGC------AGTCTTATACCACAGTAGAGtacaaaaattttctttcacATCCATACTGTAAAATCCTTTCCTCTCTGCCTTGTCCACTTGTCCTTTCAACAACAGACAGTATAACTGAGTTTGAGTTTggctaaacatttattttttactaattagtgttgaagtca-tttgcaattttgtttttcgaattttaCACATAGTACAAGAATgatttatctttcct--------tcatattctACGTTGCTATTTTCATAAATAT---GAGATGCAATAATCTGGTCATTATGCCC-AAAAATA--AGAGATCTCAGTGAAATACTCCTACAACATATACATG---AACAGCcgataaaattaatgtttt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18605126 1755 + 33263144 ---GGAACGGTATACCAGAAGGAGACCAGGGTGGGTAAA---GGGTGCTGTAGCATCTAGTATGACTGGTTCCCA-GAAAC--TATCTGTCTATCATAAACAGATGTCCAAGAAACAATCCCTAGGTAAGGAATTCCATGATGAAAAGTT-------------CAAATTTGAG--------------------------AGAGATAAAATTGTTTGCATATGGCAATCTGTGTAGACCAGAGTTTGGAATTTCTCAGGGGAGAACAGAAAACTGAAGGAACAAAACCAGGAATTTGAGCTTACACCTTATCACTGAGAGGAATGAGGAATGTCAT-TACCGTTCAATATGAAGATGTCTTCTGTAGCAATACAAATTTAAGTAGTAGGTTGCCAAATATTAAGCTTACCT----AGACCCAACTGCAAAACTaaggagaaagataaagg--gaaaaaaagagaaaaggggc-aaaaaagaaagaaaaaAGTGTGTGTGATTAGGGGGTG--------------------ACTAAGACGG-AAAAAACAATTTAATGAGTCAAGAGTGCTTGGATTTCATCATAGCTT----CATTTATGAAATTCTGGGTATCTTTTCAAGAAAGTTAAGTAATTTTTAGAAAAGCGA-TACTTTTCAAGAGACAATTTTGGCCTCGGCGAGGAAATGGTTATAACTAAAGATATGGAGCAATGTAGAAGAATTCAGAAAGAAACCAAATCTCTGGAAAAAGTGAGGC--------------TTTTTTTTCATTGTAAAGGAACATAAATTTAGTCTCCAACCCACAATCCTCGCCTATCCTCCAACT-CCCC--AAATCCTGCAAAGCCCATAGAAAGTGGATAGTGTGCCAAAACAAACAGTGT-GGCTGCAGCTGCGTGGATGAAGGGTGGGATGAGGTTCGAGTGGCAAGGGAGCATGACTGGCAGGCAAC------CGAATGGAATCACTTTAAAGCAGTACCACAAAATGGAGACTAAA-TGCTGTGAGGACCTCCAGATTTCAGAGAAAATGGGATATGCTT-AGCAAAATCACAGAATAGATTCTCTACTCCAATTCCTTTC-AAAAACCAGACaaacaaaaac--aggaaaagagaaaatgaaacaaagcaaaacaTACCTGCTCTCTTATCTGTCTTTAATTAAAGCATAAAATACCCTCCCTCTTCTCTTCT-CCCAACCACCCAGGAACAGAAGAGCGAACTGGCAGCAGCTCAGGTGAAAGACTTCAGCCTTCCAGCTACAAAGAGGGGAGATAGCAGACAATGGAACTGGTGATTCATTACAAAAGAATACACTCCAGA-----G-CGGCCTGCTGCCACATGGACTCACTGCACTATTTAAAGGAACAGCAACCCCCTTTCCAACCTCCCTTATTCCTAACACCTTCCCTCCTCTTGGTCCTGATGGAAAACAGATTTTGAAGAAAATGCCAGCAAAGCACTGAGCTGTCCAAGAAAGGGAGGGCTTTGTGTTCCACAGAAACTGGC------AGTCTTATACCACAGTAGAGTACAAAAATTTTCTTTCACATCCATACTGTAAAATCCTTTCCTCTCTGCCTAGTCCACTTGCCCTTTCAACAATAGACAGTATAACTGAGTTTGAGTTTGGCTAAACATTTATTTTTTACTAATTAGTGTTGAAGTCA-TTTGCAATTTTGTTTTTTGAATTTTACACATAGTACAAGAATGATTTATCTTTCCT--------TCATATTCTACGTTGCTATTTTCATAAATAT---AAGATGCAATAATCTGGTCATTATGCCC-AAAAATA--AGAGATCTCAGTGAAATACTCCTACAACATATACATG---AACAGCCGATAAAATTAATGTTTT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198305304 1774 + 210400635 ---GGAATGGTATACCCGAAGAAGACCAAGGTGGGTAAA---GGGGGCTGTATCATCTAGTATGACTGACTCCCA-GAAACAGAAACCATCTATCATAAACAGATGTCCAAGAAACAACCCCTAGGTAGGGAATTACCTGATGAAAAGTT-------------CAAATTTGAG--------------------------AGAGATAAAATTGTTTGCATATGGCAATCTGTGTAGATGAGAGTTTGGAATTTCTCAAGGGAGAACAGCAAACTGGAGGAACAAAACCGGGAATTTGAGCTT-TACCTTATCATTGAGAGGAATGAAGAATGTCAC-TGCCTTTCAATGTGAAGATGTCTTCTACAGCAATACAAATTTCAGTAGTAGGTTGTCAAATATTAAAATTACCT----GGATTCAATTGCAAAACTAAGTagaaagataaagg-aaaaaaatagaggaaaggggcaaaaaaagaaagaaaaaaaTGTGTGTGATTGGGGGTTG--------------------ACTAAAATGGAAAAAAACAATTTAGTGAGTCAAGATTGCTGGGATTTCATCATAGCTT----CATTTATGAAATTCTAGGTATCTTTTCAAGAAAGCTAAGTAATTTTTAGAAAAGCAATTATTTTTCAAGAGATAATCTTGGCCTTGGCAAGGTAATGGTTATAACTGAAGATATGGAGTAATGTAGAAGAATTCAGAAGGAAACCAAATCTCTGGAAAAAGTGAGGCttttttttttttttttttttttCATTTTAAAGGAACATAAATCTAGTCTCTAGTCCACAATCCCCACCTATTCTCCAATTCCCCC--AAATCCTGCAAAGCCCATAGAAAGTAGAAAGTGTGCCAAAACAAACAGTGT-GGCTGCAGCTCCGTGGATGAAGGGTGGGATGAGGTTCGAGTGGCAAGGGAGCATGACTGGCAGGCAAC------CAAATGGAATCACTTTAAAGCAATGCCACAAAATGGAGACTAAA-TGATATGAGGACTTTCAGAATTCAGAAAAAATGGGATATGCTT-AGCAAAATCACAGAATAGATCCCCTACTCCAACTCCTTAT-AAAAACCAGACAAACAAAAGCAGAGGAAAAGAGAAAACGAAACAAAGCAAAACATACCTGCTCTCTTATCTGTCTTTAACTAAAGCATAAAATACCCTCCCTCTTCTCTTCT-CCCAACCACCCAGGAACAGAGGAGC-AACTGGCAGCAGCTCAGGTGAAAGACTTCAGCCTTTCAGCTACAAAGAGGGGAGATAGCAGACAATGGAACTGGTGATTCATTACAAAAGAATACACTCTGGA-----G-CGGCCTGCTGCCACATGGACTCACTGCACTATTTAAAGGAACAGCAACCCCCTTTCCAACCTCCCTTATTCCTAACACCTTCCCTCCTCTTGGTCCTGATGGAAAACAGATTTTGAAGAAAATGCCAGCAAAGCACTGAGCTGTCCAAGAAAGGGAGGGCTTTGTGTTCCATGGAAACTGGC------AGTCTTATACCATAGTAGAGCACAAAAATTTTCTTTCACATCCACATTGTAAAATCTTTTCCTCTCTGCCTAGTACACTTTCCCTTTCAACAACAGATAGGATAACTAAGTTTGAGTTTGGCTAAACATTTATTCTTTACTAATTAGTGTTGAAGTCA-TTTGCAATGTTATTTTTCAAATTTTACACATAGTACAAGAATGATTTATCTTTCCT--------TCATATTCCACATTGCTATTTTCATAAATGT---GAGATGCAATGATCT-----ACCTACTT-AAAAATA--AGAGATCTCAGTGACATACTCCTAGAACATATACATGAACAACAGCCCATAAAATTAATTTTTT i calJac3.chr1 I 1 C 0 s mm10.chr15 77149604 1507 + 104043685 -------------------------CTGAGGTCAGTGGA---TGGGTCT----CATCCTGGGTGATT---TCCCATGAGAC--AACCTA----------------------------------AAGAAAGGCATTACATCATGAGAGGTTACAAGCTGAACCACAAGTCAGAG--------------------------AGAGATGAGACTGTTCCCG-ATAGCCATCTGTACAGATGTGACTTTGCAATTTCTTCAGGG---------------AAGAACAAAAC------------------------CACTGAGAAGGAGGAGGGCTGTCAT-TACCTTTCAGCATAAAGCTGTCTTCT--AGCAATGCAAGCTTCAACAGGAAGCTGTCAAACCCCAAGCT-----------------------------------------AGG---------------------C-------------------GGTATGGGAT-----GGAG--------------------ACAAACACAT-TTACAGCATTGCAGACATTCA---------GAGTTCTAACAT--CCC----CATTTATGGAATTCTGAGGAGC-TTCCAGGAAAGATAAAGAATTTTGAGAATAGTGA-TACTGTTTAATAGTCAGTCTTGGTCTTAGTAAGGAAATGGTTAAAACTGAAGCTATAGACCAGTGTAGAAGAATTCAGAAAGG----AAGACACTGGAAAAAGTAAGGC-CTTTTCTTTTTCTTTTTGGTTCTTTGTAAAGGAACATAAATTTAGCCTCCAACCCAC-ACCCCCGCCTATCCCCAAACT-TCCCCAGAATCCTGTGCAGCCCATAGAAAGTGGAAAGTGTGCCAAAACAAACAGCGT-GGGCTCCACTCTGTGTGTCTAGG--GGGAAGGGGTGCGGGGGGGGGGGGGCTGTG--TGGAAAGGAGCAAAAAAAGAACAGAATCATTTCAGATGAAGGCCACAAAATGGAGACTCAA---------------------TTCACAG-ACACAGGATGTGCTT-TCAAAATTCATAGACCAGAT-CCCAGCACCAGTGA---TC-AGAAAGC--ACAAACCGAA----AGGGGAGGGGAAACCTAGACAAAGC-AAACCTACCTGCTATCATATCTGCCTCTAATTAAAGCATAAAACAGCCTGCTCCCACTCCTCTGCCCAACTACCCAGGAACTGAGAG-------GGCA-CAGCTCAGGTGAAAGACTTCAGTC-TCCAGCTACAA--AGGGGAGATAGCAGACAATGGAGCTGGTGATTCATTACAAAAGAATACACTCCAGAGGCCTG-CTGCCTGCTGCCACTCCGGCTCCCAGCACTATTTAAAGGAACAGCAACCTTCTTCCCAGCTTCCCCTACTCCTAACACCTTCTCTCC---TGGTTCTGATGGAAAACAGATTTTGAAGAAAATGCCAGCAAAGCACTGCACTGTCCAAGAAAGGGAGGGC-CTGTGCTCC--GGGACCTGGC------AGCCTCACCCTGCTGCAGAGT---CAAGCACGCATCTGCTTCCAGGTTGTAA-------------------TGTAAGCTTTCCTTT------------AGTGTAACAGAGTTTGTGTCTTGCTAAGTGGT--TTTTAAATTAATTAG-GTAAAAGTTGTTTTTCAGCTTTGTTTTCCTAG-TTTACACATATTAGCAGAATGACTTTCCTTTTCT--------TT-TAACCCACGGCGC-ATATCTACAGACAG---GACAAACACTATCTTTGAGTATGTGATT-CAAGTTAAGAGAGACTTCAGCAAAAAACTTCCGTAACATGAAAATG---AATAGGAGATAAGGGTATTACTTA i mm10.chr15 C 0 C 0 s canFam3.chr10 40928590 1771 - 69331447 GGGAGAACGGTACACCAGAAAAAGACCACAG--GGCAGAG--AGGGGCTGTATCATCTA-CAGGACTGGTTCCTG-GTGAC--AACTCA-GTGTCACAGAGAGATGCTTGAGAAACAGCCCCAAGGTAAGGAATTATACA--GAGATGCT-------------AAAATGTGAGTGCTCCACAAGCCAAGAGTCAAAAGAAAAGATGAAACTGTTTCCACGTGGTCACCTGTGTAGGTAGGAGTTTGAAAATTTTCA---GAGAACAGAAAACCAGAGGAACAAAACCAGGCCTGTGTG-GCACACACTATCGTGGAGAGG---GAGAAGTGTCCTGTACCTTGTAACATGGAGGTGTCCTCAGCGGCCATACCAACCCCAATAACAGATTATCAAATGGTAGGCTTGCTTACTGAGTCTCAACTGCAAAACTAAGGAGAAAGATGAAGTTAAAAAAAAAAAGAGAAGGGGC--------------AAAAAGGTGTGTGTTTGGGTGGTGGGGGTAGAGCCATGGGGATAACTGGGA--A-GAAAAATCATCTAACAAGGCAAAATTGCTCAGATTTAATCA----------CATTTATGCAATTCTGGGTATCTATTCAGGAAAGCTTAGAAATTTTGAGCACAGTAG-TATTTTTCAAGTGACCATCTTGGCTCTGGCAAGGAAATGGTTATAACTGAAGATATGGAACAGTGTAGAAGAATTCAGAAAGAAACCCAATCTCTGGAAAAAGTGAGGC-----------TTTTTGTGGTTCATTGTAAAGGAACATAAAT-TAGTCTCCAACCCACAATCTGCACCTACCCCCAACTT-CCCA--GCGTCCTGCGCAGCCCATAGAAAGTGGAAAGTGTGCCAAAACAAACAGTGTGGGCTGAAGCTCTGTGGATGAAGGGTGGGATGAGGTTCGGGTGG-----------AACTGGCAGGCAAT------CGAATGGAATCACTTTAAAGCAATGCCACAAAATGGAGACTAAATTATCAAGAGCACTTTCAAAATCCACAGAAAATGGAATATGCTTAAACTAGATCACAGAATTGATTCCCTATTGCAACTCGGTTCAAAAAAACACGCACAGAGAAA---AGGAGAGGGGGAAATGGAACAAAGCAAAACATACCTGCTCTGCTATCTGTCTTTAATTAAAGCAC-AAATACCCTCCCTCTTCTCTTCT-CCCAACCACCCTGGAACAGAATAGTGAACTGGCAGCAGCTCAGGTGAAAGACTTCAGCCTTCCAGCTACAAAGAGGGGAGATAGCAGACAATGGAACTGGTGATTCATTACAAAAGAATACACTCCAGA-----GCCGGCCTGCTGCCACATGGGCTCACGGCACTATTTAAAGGAACAGCAACCCCCTTTCCAACCTCCCTTATTCTTAACACCTTCCCTCCTCTCGGTCCTGATGGAAAACAGATTTTGAAGAAAATGCCAGCAAAGCACTGAGCTGTCCAAGAAAGGCAGGGCTTTGTGTTCCACAGAAACTGGC------AGCCTTACACTATAGGAGAATACAACAATTTTCTTTCACATCCAT--TCTAAGATCTTTTCC---CTGTTGGGTACACTCTTCCTTTCAACAAC----AGTGTAATGGAGTCTGAGCCTGGCTAAACATTTTTTTTTAAATTATTA--CTTGAAGTCA-TTTGCAATTTTGTTTTTTTAACTTTACACCTATGACAAGAATGAATGACTTCTCCTTGCCTTCCTCTTATTCTACATTGTTGTTTCTACACATGTGAAGAAATGCATTAATTTGGTTCACATGCTT-AGAAGAG--AG-GATCTCAGTGAAATACTCCTACAGCATTTACATG---AGCAACAGATACACCTAAAGTTGT i canFam3.chr10 C 0 I 212 a score=1404711.000000 s hg38.chr22_KI270876v1_alt 158026 424 + 263666 AAGTATCACATAAGCATGTCTATCGGC---TATATTAGAATTTTGTGATTAAATTGCCATTTGCTTTTTAGCAGAGCACTGA---TTACTTACTATAAATGACAGAGTAGTTTGATAATT-----------------------AAAACAAAAACAGGCCCTATAAAAGT--------AGAGCATATGTAATAATAAAGCGCATACACTGTGCAAATACTGACAAGGATCTAATATGGTATGATGAAAAAGTCATTCACTGAAAG---------CCCTTTTCCAACAGCTGAGCAA-----TGGAAACTGGGGACTACAGAGATGGTATCATCTGAAGATGCAAAGAACCTAAGTAGCAAAACAGTGAAAACACATCCA--TACATCGCTCTT----------------------ACAT---------TGTAATAAACCGTT-TAACTTTGAAAACCCAGGCCTAACCACCAGTATAGACATTCTATATTGAGAAAGCTTATGTGACAGG s panTro4.chr22 34536209 424 + 49737984 AAGTATCACATAAGCATGTCTATCGGC---TATATTACAATTTTGTGATTAAATTGCCATTTGCTTTTTAGCAGAGCACTGA---TTACTTACTATAAATGACAGAGTAGTTTGATAATT-----------------------AAAACAAAAACAGGCCCTATAAAAGT--------AGAGCATATGTAATAATAAAGCGCATACACTGTGCAAATACTGACAAGGATCTAATATGGTATGATGAAAAAGTCATTCACTGAAAG---------CCCTTTTCCAACAGCTGAGCAA-----TGGAAACTGGGGACTACAGAAATGGTATCATCTGAAGATGCAAAGAACCTAAGTAGCAAAACAGTGAAAACACATCCA--TACATTGCTCTT----------------------ACAT---------TGTAATAAACCGTT-TAACTTTGAAAACCCAGCCCTAACCACCAGTATAGACATTCTATATTGAGAAAGCTTATGTGACAGG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30949835 424 + 46535552 AAGTATCACATAAGCATGTCTATCTGC---TATATTAGAATTTTGTGATTAAATTGCCATTTGCTTTTTAGCAGAACACTGG---TTACTTACTATAAATGACAGAGTAGTTTGATAATT-----------------------AAAACAAAAACAGGCCCTATAAAAGT--------AAAGCATATGTAATAATAAAGCGCATACACTGTGCAAATACCGACAAGGATCCAATATGGTATGATGAAAAAGTCATTCACTGAAAG---------CCCTTTTCCAACAGCTGAGCAA-----TGGAAACTGGGGACTATAGAAATGGTACCATCTGAAGATGCAAAGAACCTAGGTAGCAAAACAGTGAAAACATATCCA--TACATTGCTCTT----------------------ACAT---------TGTAATAAACCGTT-TAACTTTGATAACCCAGCCCTAACCACCAGTATAGACATTCTATATTGAGAAAGCTTATGTGACAGG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100501744 423 - 115148730 AAGTATCACATAAGCATGTCTATCTGC---TATATTAGAATTTTGTGATTGAATTGCCATTTGCTTTTTAGCAGAGCACTGA---TTA-TTACTATAAATGACAGAGTAGTTTGATAATT-----------------------AAAACAAAAACAGGCCCTATAAAAGT--------AGAGCATATGTAATAATAAAGCACATACACTGTGCAAATACTGACAAGGATCAAATATGGTATGATGAAAAAGTCATCCACTGAAAG---------CCCTTTTCCAACAGCTGAGCAA-----TGGAAACTGGGGACTATAGAAATGGTACCATCTGAAGATGGAAAGAACCTACGTAGCAAAACAGTGAAAACATATCCA--TACATCGCTCTT----------------------ACGT---------TGTAATAAACCGTT-TAACTTTGATAACCCGGCCCTAACCACCAGTATAGACATTCTATATTGAGAAAGCTTATGTGACAGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80655323 430 + 95678458 ATGTATCACATAAGCATGTCTATCTGC---TATATTAGAATTTTGTGATTAAATTGCCATTTGCTTTTTAGCAGAGCACTGA---CTACTTACTATAAACGACAGAGCAGTTT--TAATT-----------------------AAAACAAAAACAGGCCCTATAAAAGTAGTAATAAAGTGCATATGTAGTAATAAAGTGCATACACTGTGCAAATACTGACAAGGATCTAATATGGTATGATGAAAAAGTCATCCACTGAAAG---------CCCTTTTCCGACAACTGAGCAA-----TGGAAACTGGGGACTATAGAAATGGTATCATCTGAAGATGCAAAGAACCTAGGTAGCAAAACAGTGAAAACATATCCA--AACATCTCTCTT----------------------ACGT---------TGTAATAAACCATT-TAACTTTGATAACCCAGCCGTAACCATCAGTATAGACATTCTATATTGAGAAAGCTTATGTGACAGG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81081519 430 - 96509753 ATGTATCACATAAGCATGTCTATCTGC---TATATTAGAATTTTGTGATTAAATTGCCATTTGCTTTTTAGCAGAGCACTGA---CTACTTACTATAAACGACAGAGCAGTTT--TAATT-----------------------AAAACAAAAACAGGCCCTATAAAAGTAGTAATAAAGTGCATATGTAGTAATAAAGTGCATACACTGTGCAAATACTGACAAGGATCTAATATGGTATGATGAAAAAGTCATCCACTGAAAG---------CCCTTTTCCGACAACTGAGCAA-----TGGAAACTGGGGACTATAGAAATGGTATCATCTGAAGATGCAAAGAACCTAGGTAGCAAAACAGTGAAAACATATCCA--AACATCTCTCTT----------------------ACGT---------TGTAATAAACCATT-TAACTTTGATAACCCAGCCGTAACCATCAGTATAGACATTCTATATTGAGAAAGCTTATGTGACAGG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76338692 430 + 90941950 atgtaTCACATAAGCATGTCTATCTGC---TATATTAGAATTTTGTGATTAAATTGCCATTTGCTTTTTAGCTGAGCACTGA---CTACTTACTATAAACGACAGAGcagttt--taatt-----------------------aaaacaaaaacaggcccTATAAAAGTAGTAATAAAGTGCATATGTAGTAATAAAGTGCATACACTGTGCAAATACTGACAAGGATCTAATATGGTATGATGAAAAAGTCATCCACTGAAAG---------CCCTTTTCCGACAACTGAGCAA-----TGGAAACTGGGGACTATAGAAATGGTATCATCTGAAGATGCAAAGAACCTAGGTAGCAAAACAGTGAAAACATATCCA--AACATCTCTCTT----------------------ACGT---------TGTAATAAACCATT-TAACTTTGATAACCCAGCCGTAACCATCAGTATAGACATTCTATATTGAGAAAGCTTATGTGACAGG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18606881 430 + 33263144 ACGTATTACATAAGCATGTCTATCTGC---TATATTAGAATTTTGTGATTAAATTGCCATTTGCTTTTGAGCAGAGCACTGA---CTACTTACTATAAACAACAGAGTAGTTT--TAATT-----------------------AAAACAAAAACAGGCCCTATAAAAGTAGTAATAAAGTGCATATGTAGTAATAAAGTGCATACACTGTGCAAATACTGACAAGGATCTAATATGGTATGATGAAAAAGTCATCCACCGAAAG---------CCCTTTTCCGACAACTGAGCAA-----TGGAAACTGGGGACTATAGAAATGGTATCATCTGAAGATGCAAAGAACCTAGGTAGCAAAACAGTGAAAACATATCCA--AACATCTCTCTT----------------------ACGT---------TGTAATAAACCGTT-TAACTTTGATAACCCAGCCGTAACCATCAGTATAGACATTCTATATTGAGAAAGCTTATGTGACAGG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198307078 421 + 210400635 AAGTATCACATAAGCATGTCTGTCTGC---TTTATTAAAATTTTGTGATTAAATTGCCATTTGCTTCTTAGCAGAGCACTAA---TTACTTACTATAAATGACAGAGCAGTTTACCAATT-----------------------AAAACAAAAACAGGCCCCATAAAACT--------AGAGCATATGTAATAATAAAGCACATATACTGTGCAGATACTGACAAGGATCTAATACTGTATGATGAAAAAGTCATCCACTGAAAT---------CCCTTTTCCAACAACTGGGAGA-----TGGAAACTGGGAACTACAGAAATGGTATGATCTGAAGATGCAAAGAACGTAGGTAGCAAAACAGTGAAAACATACCCA--TACACCACTCTT----------------------ATAT---------TATAATAAACCATT-TAACTTTGATAACCCAGTCCTAAC---CAGTATAGAAATTCTATATTGAGAAAGCTTATGTGACAGG i calJac3.chr1 C 0 C 0 s mm10.chr15 77151111 365 + 104043685 AAGTATCACATGAGCACGTCTGGCTACTAATATATGAAAATTTTGCTATTAAAATTCCATTT-----TTATTAAAAAGCTGAGCTTTCTTTATTGTCAATAATTATGCTGTTTGCTAAT---------------------------ACAACGAGAGGCCGTGTAAAATT--------AGAGTCCATGTAATAACAAAGCTC-----------------------------------GGATGATGAGGACTCCTTCCACCCA------------------------------GCGA-----TGAGGCCAAGGGACCGGAAGGAGGGTCC--------AAGGCAGAGTCAGTGAGCCATGATGCAACGTGAGCAACGCCATTTGAGTCACTTTT----------------------TCATATCCTAGCCAGTAACAAGCCATTGTCACACCAACAG-CTGCCCCTGAC---CAGCACAGACAGCTTACACTGAAAATGCTTAGATGATAGG i mm10.chr15 C 0 C 0 s canFam3.chr10 40930573 423 - 69331447 aaAAGTCACAGGAGCATGTCTGTCTAG---TATATTAGAATTCTGTGATTAAATTGTCATTTTTTTAAAAGCAAAACACTAT--------------AAATG-----GCAGTTTGCTAATTACCCCAAAAACTGGCCTTATTAAAAAAAAAAAACTGGCCTTATAAAACT--------AGAGCCAATAAAATAATA-----------CGATGTAACTATTGATATGGATTTAATATTG-------------TCATCTACTGAAAAGCCCTTCATCCTTCTTCCATCAAGTGAGCAATTAATTTAAAATAAAGGGATACAAAAATGTCAAGATCC-AATATGCAAAGAACCTAAG--------------AAATATATCTA--AATACCCTTATTAATATACTAGTCAAGACACTAAACAC---------CATGATAAACCATT-TAACTTTGATAACCAAACCCTGAA---CAGTGC--ACATTTTATATTCAGAAAGTTTACGTGACAGG i canFam3.chr10 I 212 I 194 a score=160283.000000 s hg38.chr22_KI270876v1_alt 158450 34 + 263666 TCATTATCAAATGTTGGGATTGGATGTCTGGCTc s panTro4.chr22 34536633 34 + 49737984 TCATTATCAAATGTTGGGATTGGATGTCTGGCTC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30950259 34 + 46535552 TCATTATCAAATGTTGGGATTGGATGTCTGGCTC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100502167 34 - 115148730 TCATTATCAAATGTTGGGATTGAATGTCTGGCTc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80655753 34 + 95678458 TCATTATCAAATGTTGGGATTGGATGTCTGGCTC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81081949 34 - 96509753 TCATTATCAAATGTTGGGATTGGATGTCTGGCTc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76339122 34 + 90941950 TCATTATCAAATGTTGGGATTGGATGTCTGGCtc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18607311 34 + 33263144 TCATTATCAAATGTTGGGATTGGATGTCTGGCTc i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198307499 34 + 210400635 TCATTTTCAATTGTTAGGATTGGATGTCTGGCTC i calJac3.chr1 C 0 C 0 s mm10.chr15 77151476 34 + 104043685 GCATTATCAAGTGTTTGGATTTGATGTCTGGCTC i mm10.chr15 C 0 C 0 s canFam3.chr10 40931190 34 - 69331447 TCATTATCAAATATTGGGATTGGATGTCTGGCTT i canFam3.chr10 I 194 I 245 a score=44461.000000 s hg38.chr22_KI270876v1_alt 158484 19 + 263666 aaacacacacacacacaca s panTro4.chr22 34536667 19 + 49737984 AGacacacacacacacaca i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30950293 19 + 46535552 AAacacacacacacacaca i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100502201 19 - 115148730 aaacacacacacacacacg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80655787 19 + 95678458 AAACACAAACATACACACA i rheMac3.chr10 C 0 I 16 s macFas5.chr10 81081983 19 - 96509753 aaacacaaacatacacaca i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76339156 19 + 90941950 aaacacaaacatacacaca i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18607345 19 + 33263144 aaacacaaacatacacaca i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198307533 19 + 210400635 AAACACACGCACGCATGCA i calJac3.chr1 C 0 C 0 s mm10.chr15 77151510 4 + 104043685 AAGA--------------- i mm10.chr15 C 0 C 0 e canFam3.chr10 40931224 245 - 69331447 I a score=-6186.000000 s hg38.chr22_KI270876v1_alt 158503 25 + 263666 tgtgcaca--cacacacacacacgcag-------- s panTro4.chr22 34536686 23 + 49737984 ----cacaagcgcacacgcacacgcag-------- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30950312 11 + 46535552 ----------------tgcacacacag-------- i ponAbe2.chr22 C 0 C 0 s macFas5.chr10 81082002 16 - 96509753 ----------cacacatgcaggcaca--------- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76339175 16 + 90941950 ----------cacacatgcaggcaca--------- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18607364 16 + 33263144 ----------cacacatgcaggcaca--------- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198307552 5 + 210400635 ----------------TGCAT-------------- i calJac3.chr1 C 0 C 0 s mm10.chr15 77151514 25 + 104043685 ----------TGTACAAACCTATACAGCAAAGCGG i mm10.chr15 C 0 C 0 e canFam3.chr10 40931224 245 - 69331447 I e rheMac3.chr10 80655806 16 + 95678458 I e nomLeu3.chr7b 100502220 0 - 115148730 C a score=53814.000000 s hg38.chr22_KI270876v1_alt 158528 20 + 263666 gcacaacacaacacaaccac s panTro4.chr22 34536709 20 + 49737984 gcacgacacaacacaACCAC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30950323 20 + 46535552 gcacaacacaacacaACCAC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100502220 9 - 115148730 -----------cacaaccac i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80655822 20 + 95678458 acacaacacaacacaacCAC i rheMac3.chr10 I 16 C 0 s macFas5.chr10 81082018 20 - 96509753 acacaacacaacacaaccac i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76339191 20 + 90941950 acacaacacaacacaaccac i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18607380 20 + 33263144 acacaacacaacacaaccac i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198307557 20 + 210400635 GCACAGCACAACACAACCAC i calJac3.chr1 C 0 C 0 s mm10.chr15 77151539 12 + 104043685 -------ACAA-ACAAGCCC i mm10.chr15 C 0 C 0 e canFam3.chr10 40931224 245 - 69331447 I a score=1727862.000000 s hg38.chr22_KI270876v1_alt 158548 501 + 263666 aGGACAAATG-AAAGACTTGGCCCAGCTGGTTATTTCCTTTGATTGTTTTCCCCCTAGATTACTAACAACTATGTACATTACATTAACACAGAAAGTATATACAACAAAACAAATACGCTG----GAATACTGAAAATTCACAAATTTGATATTCTATCCTTGCCAGTTGTATAATTTCAGGATGGGC-AAAAACTCATAA--CTT--TTCTTCAATATTTAGCACATCCTGATAAAACA-----GGTGATTTTA------TT-ATTAGAATTATTAAGCACCCCAGAATCTCTCTTTCCAGTTTCCATTTATTTCTTCTACTTCATTCCTAAACTTATGGCTTCTTTAAATACTAATTATTACGACCACAATATTAAGTGTGCAT--AAGCATGTGCACTCTAACTTAATGGTCACACACACTACACTT-ACCAGC--TCCTCTAGAAACTAAGGGGAAATGTTCCAAGAGGCAATAGAAAAC---TCATCAT-AAAAATTTCCATTTTAGATCATTCTTTCACTAGTTTA s panTro4.chr22 34536729 497 + 49737984 AGGAGAAATG-AAAGACTTGGCCCAGCTGGTTATTTCCTTTGATTGTTTTCCCCCTAGATTACTAACAACTATGTACATTACATTAACACAGAAAGTATATACAACAAAACAAATACGCTG----GAATACTGAAAATTCACAAATTTGATATTCTATCCTTTCCAGTTGCATAATTTCAGGATGGGC-AAAAACTCATAA--CTT--TTCTTCAATATTTAGCACATCCTGATAAAACA-----GGTGATTTTA------TT-ATTAGAATTATTAAGCACCCCAGAATCTCTCTTTCCAGTTTCCATTTATTTCTTCTACTTCATTCCCAAACTTATGGCTTCTTTAAATAC----TATTACGACCACAATATTAAGTGTGCAT--AAGCATATGCACTCTAACTTAATGCTCACACACACTACACTT-ACCAGC--TCCTCTAGAAACTAAGGGGAAATGTTCCAAGATGCAATAGAAAAC---TCATCAT-AAAAATTTCCATTTTAGATCATTCTTTCACTAGTTTA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30950343 496 + 46535552 AGGACAAATG-AAAGATTTGGCCCAGCTGGTTATTTCCTTTGATTTTTTTCCCCCTAGATTACTAACAACTATGTACATTACATTAACACAGAAAGTATATACAACAAAACAAATATGCTG----GAATACTGAAAATTCACAAATTTGATATTCTATCCTTTCTAGTTGTATAATTTCAGGATAGGC-AAAAACTCATAA--CTT--TTCTTCAATATTTAGCACATCCTGATAAAACA-----GGTGATTTTA------TT-ATTAGAATTATTAAGCACCCCAGAATCTCTCTTTCCAGTTTCCATTTATTTCTTCTACTTCATTCCTAAACTTATGGCTTCTTTAAATACTAATTATTACAACTACAATATTAAGTGTGCATACAAGCATGTGCACTCTA----AATGCTCACACACACTACACTT-ACCAGC--TCCTCTAGAAACTAAGGGGAAATGTTCCAAGAGGCAATAGAAAAC------TCTA-AAAAATTTCCATTTTAGATCATTCTTTCACTAGCTTA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100502229 501 - 115148730 aGGACAAATG-AAAGATTTGGCCCAGCTGGTTATTTCCTTTGATTTTTTTCCCCCTAGATGACTAACAACTATGTACATTACATTAACACAGAAAGTATACACAACAAAACAAATATGCTG----GAATACTAAAAATTCACAAATTTGATATTCTATCCTTTCCAGTTGTATAATTTCAGGATGGGC-AAAAACTCATAA--CTT--TTCTTCAATATTTAGCACATCCTGATAAAACA-----GGTGATTTTA------TT-ATTAGAATTATTAAGCACCCCAGAATCTCTCTTTCTAGTTTCCATTTATTTCTTCTACTTCATTCCTAAACTTATGGCTTCTTTAAATACTAATTATTATGACCACAATATTAAGTGTGCAT--AAGCATGTGCACTCTAACTTAATGCTCACACACACTACACTT-ACCAGC--TCCTCTAGAAACTAAGGGGAAATGTTCCAAGAGGCAATAGAAAAC---TCATTAC-AAAAATTTCCATTTTAGATCATTCTTTCACTAGttta i nomLeu3.chr7b C 0 I 521 s rheMac3.chr10 80655842 497 + 95678458 AGGACAAATG-AAAGATTTGGCCCAGCTGGTTATTTCCTTTGAAT-TTTTCCCCCTAGATTACTAACAACTATGTACATTACATTAACACAGAAGGTATATACAACAAAACAAATAGGCTG----GAATACTGAAAATTCTCAAATTTGATATTCTATCCTCTCCAGTTGTATAATTTCAGGATGGGCAAAAAACTCATAA--CTT--TTCTTCAATATTTAGCACATCCTGATAAAACAT----GGTGATTTTA------TT-ATAAGAATTATTAGGTACCCCAGAATCTCTCTTTCCAGTTTCCATTTATTTCTTCTACTTCTTTCCTAAAATTATGGCTTCTTTAAATACTAATTATTACAACCACAATATTAAGTGTGCAT--AAGCATGTGCACTCTAACTTCATGCTCACACACACTACACTT-ACCAGC--TCCTCTAGAAACTAAGGTGAAACGTTCCATGAGGC-----AAAAC---TCATTAT-ACAAATTTCCATTTTAGATAATTCTTTCACTGGTTTA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81082038 496 - 96509753 aGGACAAATG-AAAGATTTGGCCCAGCTGGTTATTTCCTTTGAAT-TTTTTCCCCTAGATTACTAACAACTATGTACATTACATTAACACAGAAGGTATATACAACAAAACAAATAGGCTG----GAATACTGAAAATTCTCAAATTTGATATTCTATCCTCTCCAGTTGTATAATTTCAGGATGGGC-AAAAACTCATAA--CTT--TTCTTCAATATTTAGCACATCCTGATAAAACAT----GGTGATTTTA------TT-ATAAGAATTATTAGGCACCCCAGAATCTCTCTTTCCAGTTTCCATTTATTTCTTCTACTTCTTTCCTAAAATTATGGCTTCTTTAAATACTAATTATTACAACCACAATATTAAGTGTGCAT--AAGCATGTGCACTCTAACTTCATGCTCACACACACTACACTT-ACCAGC--TCCTCTAGAAACTAAGGTGAAACGTTCCATGAGGC-----AAAAC---TCATTAT-ACAAATTTCCATTTTAGATAATTCTTTCACTGGTTTA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76339211 496 + 90941950 aggacaaATG-AAAGATTTGGCCCAGCTGGttatttcctttgaat-ttttCCCCCTAGATTACTAACAACTATGTACATTACATTAACACAGAAGGTATATACAACAAAACAAATAGGCTG----GAATACTGAAAATTCTCAAATTTGATATTCTATCCTTTCCAGTTGTATAATTTCAGGATGGGC-AAAAACTCATAA--CTT--TTCTTCAATATTTAGCACATCCTGATAAAACAT----GGTgatttta------tt-ataagaattatTAGGCACCCCAGAATCTCTCTTTCcagtttccatttatttcttctacttctttcctAAAATTATGGCTTCTTTAAATACTAATTATTACAACCACAATATTAAGTGTGCAT--AAGCATGTGCACTCTAACTTCATGCTCACATACACTACACTT-ACCAGC--TCCTCTAGAAACTAAGGTGAAATGTTCCATGAGGC-----AAAAC---TCATTAT-ACAAATTTCCATTTTAGATAATTCTTTCTctggttta i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18607400 496 + 33263144 aGGACAAATG-AAAGATTTGGCCCAGCTGGTTATTTCCTTTGAAT-TTTTCCCCCTAGATTACTAACAACTATGTACATTACATTAACACAGAAGGTATATACAACAAAACAAATAGGCTG----GAATACTGAAAATTCTCAAATTTGATATTCTATCCTTTCCAGTTGTATAATTTCAGGATGGGC-AAAAACTCATAA--CTT--TTCTTCAATATTTAGCACATCCTGATAAAACAT----GGTGATTTTA------TT-ATAAGAATTATCAGGCACCCCAAAATCTCTCTTTCCAGTTTCCATTTATTTCTTCTACTTCTTTCCTAAAATTACGGCTTCTTTAAATACTAATTATTACAACCACAATATTAAGTGTGCAT--AAGCATTTGCACTCTAACTTCATGCTCACACACACTACACTT-ACCAGC--TCCTCTAGAAACTAAGGTGAAATGTTCCATGAGGC-----AAAAC---TCATTAT-ACAAATTTCCATTTTAGATAATTCTTTCACTGGTTTA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198307577 501 + 210400635 AGGACAAATGAAAAGATGTGGCCCAGCTGGTTATTTCCTTGGAT--TTTTCTCCCTAGATTACTAACAACTATGTACAGTACAGTAACACAGAAAGCAGACATAACAAAACAAATAGGCTG----GAATACTGAAAACTCACGTATTTGATATGCTATCCTTTCCAGTTGTATAATTTCAGGATGGGC-AAAAACTCATAA--A-T--TTCTTCAATATTTAGCACATCCTGATAAAACAT----AGTGATTTTA------TT-ATCAGAATTATTAAGCACCCCAGAATCTCTCTTTCCA-TTTCCATTTATTTCTTCTACTTCATTCCTAAAATTATAGTTTCCTTACATACTAAATATTACAACTACAATATTAAGTGTGCAT--AAGCATGTGCACTCTAACTTAATGCTCACACACACCACACTTAACCATC--TCCTCTAGAAATTAAGGGGAAATGTTCCAAGAGGCAACAGAAAAC---TCATTATAAAAAATTTCCATTTTAGCTAATTCTTTCACTGGTTAA i calJac3.chr1 C 0 I 1 s mm10.chr15 77151551 462 + 104043685 AGGACAGACC-AAAGACTTGATCCTATTTACTATGCCCTCTGAG--TCTGTCTTCTAGATTGCAAACAACTAGCCCTATTACTTTCAGAAACATGGTGTAGACACTGAAACAAACACCCC------AATTCTG-AAGCCCACAGATCTGA----CTGTCTTTTC-AGTTCTATGGATTCATCATG----AGAAAATAAGAAGTCTT--TCCTTCAGCACTTAGTACAT-CTGAAAAAGCACAAAAATTAAATTTA------TTGATTAGAATCTTTAACCACT---AAAAGTCTCTTTCCAGGTTCCACTTTTTTCTCTGACCTCCCCCCC----------CTCCCTGTCCCCCTGATGATTAGGAC-ACAATTTGAAGTATAAAC--AAGCAGGCA--------------GGGCTTACTTGTCACACTT---CAGCATTCCCC---ACACCAAGGGGCAATGCTCCCGGAGGCCACATCAGTC---TGATTTT-AACAGCTCCTG-TTTAGATAAGTCCTTCATTGATTT- i mm10.chr15 C 0 C 0 s canFam3.chr10 40931469 506 - 69331447 AGGACAAAT--AAAGACTTGGCTTCTCTAGCTATTTCCTTTGATTTTTTTTTTTCTAGATGACTAACAACTACATATGTTACA-TGATACAGAAACAATATATACCAAAACAAATACACTGACATACATACTGAAAATCCACAAATTTGACTCTTTATATTT--CGGTTATAGAAATTCAGGATGGGC-AAAAATGAGCAA--CTTCGTCTCTCAGCATCCAGCACATCCTGAGACAATC-----AGTGATTTTAACTTTTCT-CTTAGAATTCTTAACCACCAAGAAATCCTTCTTTCCAGTTTCTACTTATCTCTTCTGCTTTACTGCTAAGACTACAGTTTTCTTAAATGTCAATTATTCAGACTGCAATATGAAGTGAGCAC--AAGCATGTGCGTTCTATCTT-ATGCTTACACATG-----CTC-ACCAGC--TCCTCCAGAAACGAAGGACACATGTTCCAAGAGGCTGCAGAAAACCTCTGATTAG-AAAAAGCACTAGTTTAGAGAACTCTTTCACTGATTTA i canFam3.chr10 I 245 C 0 a score=5516.000000 s hg38.chr22_KI270876v1_alt 159049 6 + 263666 -AAAAAT s panTro4.chr22 34537226 6 + 49737984 -AAAAAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30950839 2 + 46535552 -AA---- i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80656339 6 + 95678458 -AAAAAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81082534 6 - 96509753 -AAAAAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76339707 6 + 90941950 -aaaaat i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18607896 6 + 33263144 -AAAAAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198308079 6 + 210400635 -AAACAT i calJac3.chr1 I 1 C 0 s mm10.chr15 77152013 1 + 104043685 ------T i mm10.chr15 C 0 C 0 s canFam3.chr10 40931975 7 - 69331447 AAAATAT i canFam3.chr10 C 0 C 0 e nomLeu3.chr7b 100502730 521 - 115148730 I a score=504460.000000 s hg38.chr22_KI270876v1_alt 159055 135 + 263666 AAATAATGAAAAGTCAAGTCATTGAAAAGCC----TTCAGTAATTGCTAAGCAAGAAGAGAGCTGTTACCCTCTAATATTGCCAGTTAATAAAAATTGAATGAGGGCTCTAAGGTTAAGCAAGTATCATCTCCCAAGCA s panTro4.chr22 34537232 135 + 49737984 AAATAATGAAAAGTCAAGTCATTGAAAAGCC----TTCAGTAATTGCTAAGCAAGAAGAGAGCTGTTACCCTCTAATATTGCCAGTTAATAAAAATTGAATGAGGGCTCTAAGGTTAAGCAAGTATCATCTCCCAAGCA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30950841 135 + 46535552 AAATAATGAAAAGTCAAGTCATTGAAAAGCC----TTCAGTAATTGCTAAGCAAAAAGAGAGCTGTTACCCTCTAATATTGCCAGTTAATAAAAATTGAATGAGGGCTCTAAGGTTAAGCAAGTATCATCTCCCAAGCA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100503251 135 - 115148730 AAATAATGAAAAGTCAAGTCATTGAAAAGCC----TTCAGTAATTGCTAAGCATGAAGAGAGCTGTTACCCTCTAATATTGCCAGTTAATAAAAATTGAATGAGGGCTCTAAGGTTAAGCAAGTATCATCTCCCAAGCA i nomLeu3.chr7b I 521 C 0 s rheMac3.chr10 80656345 135 + 95678458 ACATAATGAAAAGTCAAAGCATTGAAAATCC----TTCAGTAATTGCTAAGAAAGAAGAGAGCTGTTACCCTCTAATATTGCCAGTTAATAAAAATTGAATGAGGGCGCTAAGGTCAAGCAAGTATCATCTCCCAAGCA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81082540 135 - 96509753 ACATAATGAAAAGTCAAGGCATTGAAAATCC----TTCAGTAATTGCTAAGAAAGAAGAGAGCTGTTACCCTCTAATATTGCCAGTTAATAAAAATTGAATGAGGGCGCTAAGGTCAAGCAAGTATCATCTCCCAAGCA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76339713 135 + 90941950 acataatgaaaagTCAAGGCATTGAAAATCC----TTCAGTAATTGCTAAGAAAGAAGAGAGCTGTTACCCTCTAATATTGCCAGTTAATAAAAATTGAATGAGGGCTCTAAGGTCAAGCAAGTATCATCTCCCAAGCA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18607902 135 + 33263144 ACATAATGAAAAGTCAAGGCATTGAAAATCC----TTCAGTAATTGCTAAGAAAGAAGAGAGCTGTTACCCTCTAATATTGCCAGTTAATAAAAATTGAATGAGGGCTCTAAGGTCAAGCAAGTATCATCTCCCAAGCA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198308085 128 + 210400635 ATATAATGAAAAGTCAAGTCACTGAAAAGCC----TTCAGTAATTGCT-------AAGAGAGCTGTTATCCTCTAATATTGCCAGTTAATAAAAATTGAATGAGGGCTACAAGGTTAAGCAAGTATCATCTCTCAAGCA i calJac3.chr1 C 0 C 0 s mm10.chr15 77152014 98 + 104043685 ----------AAACCATGTACGTGAGA------------------GCTGAGT-----GAGGGCTG---CCCTCTAACACTGCCCCTCGGTGGAGAT---GTGTGGACTC-AAGGTGAAGC-AGCAGCATCTCACAGGCA i mm10.chr15 C 0 I 42 s canFam3.chr10 40931982 138 - 69331447 ATATAATGAAAAGTCAAGTAGTTGGAAAGCCTTCATTCAGTAACAGCCGAGAAAGAAGAGAGCTGTCGCCCTGTAATAGTGCCAGTTAATGAAAATTGAATGAGGGCTCCAAGGTTAAG-AAGTATCATCTCCCAAGCA i canFam3.chr10 C 0 C 0 a score=153591.000000 s hg38.chr22_KI270876v1_alt 159190 48 + 263666 A-AAAGAGAATCCAGAAACAGGATT-TATCTTTTATGTAAATTTTTTTTA s panTro4.chr22 34537367 48 + 49737984 A-AAAGAGAATCCAGAAACAGGATT-TATCTTTTATGtaaatttttttaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30950976 49 + 46535552 ACAAAGAGAATCCAGAAACAGGATT-TATCTTTTATGTAAATTTTTTTTA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100503386 49 - 115148730 ACAAAGAGAATCCAGAAGCAGGATT-TATCTTTTATGTAAATTTTTTTAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80656480 49 + 95678458 ACAAAGAGAATCCAGAAACAGGATT-TCTCTTTTATGtaaaatttttttt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81082675 49 - 96509753 ACAAAGAGAATCCAGAAACAGGATT-TCTCTTTTATGTAAAATTTTTTTA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76339848 49 + 90941950 AcaaagagaatccagaaacaggaTT-TCTCTTTTacgtaaaaatttttta i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18608037 49 + 33263144 ACAAAGAGAATCCAGAAACAGGATT-TCTCTTTTACGTAAAATTTTTTTA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198308213 49 + 210400635 ACAAAGAGAACCCAGAAATAGGATT-TCTCTTTTACATAATTTTTTTTTA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40932120 48 - 69331447 ACAAAGAGAATCCAGAAATAGGTCTATCTCTTTTATGGAAATTTTTTA-- i canFam3.chr10 C 0 C 0 e mm10.chr15 77152112 42 + 104043685 I a score=6552.000000 s hg38.chr22_KI270876v1_alt 159238 2 + 263666 AA s panTro4.chr22 34537415 2 + 49737984 aa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30951025 2 + 46535552 AA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100503435 2 - 115148730 AA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80656529 2 + 95678458 aa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81082724 2 - 96509753 AA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76339897 2 + 90941950 aa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18608086 2 + 33263144 AA i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40932168 2 - 69331447 AA i canFam3.chr10 C 0 C 0 e mm10.chr15 77152112 42 + 104043685 I e calJac3.chr1 198308262 0 + 210400635 C a score=5096.000000 s hg38.chr22_KI270876v1_alt 159240 2 + 263666 AA s panTro4.chr22 34537417 2 + 49737984 aa i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100503437 2 - 115148730 AA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80656531 2 + 95678458 aa i rheMac3.chr10 C 0 I 1 s macFas5.chr10 81082726 2 - 96509753 AA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76339899 2 + 90941950 aa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18608088 2 + 33263144 AA i chlSab2.chr19 C 0 I 1 s canFam3.chr10 40932170 2 - 69331447 AA i canFam3.chr10 C 0 C 0 e mm10.chr15 77152112 42 + 104043685 I e calJac3.chr1 198308262 0 + 210400635 C e ponAbe2.chr22 30951027 0 + 46535552 C a score=-31.000000 s hg38.chr22_KI270876v1_alt 159242 1 + 263666 A s canFam3.chr10 40932172 1 - 69331447 G i canFam3.chr10 C 0 C 0 e mm10.chr15 77152112 42 + 104043685 I e calJac3.chr1 198308262 0 + 210400635 C e ponAbe2.chr22 30951027 0 + 46535552 C e rheMac3.chr10 80656533 1 + 95678458 I e panTro4.chr22 34537419 0 + 49737984 C e papAnu2.chr10 76339901 0 + 90941950 C e macFas5.chr10 81082728 0 - 96509753 C e chlSab2.chr19 18608090 1 + 33263144 I e nomLeu3.chr7b 100503439 0 - 115148730 C a score=0.000000 s hg38.chr22_KI270876v1_alt 159243 445 + 263666 TAAAGCAGTAtttcttttctttttttttttttAATTCTTCAGCTAAAACAGCGGAAGAGGTGATTTATTATATGGTTGTTACACTCGGCCACAAATAAACACAGAAATAGTCCAGAATGTCACAGGTCCAGGGCAGAGGACCAACATGGGCATTTTGTTTATGAGCAAGGTGGGTCTCAGAGGTGATCGGCGATCAGAGGGCGATGAAGTTCTAGATCCATTGAGACAAGTTCTAGACAGTAGCATGCAGTCCCACAACTTGTACCAGCATCCCCAGCGTCTGGCATTCCATGTTTCTGCTCCTGTGGCCTCCACGGTGCAACAAGCTAGCGGTTTACTTGGACCTCTGCCTCATCTTTCTTCTTTTGCGCTTCAGCCTGCGCATTCGCTTCTTCCTCCACTTGGCTCTCATGGCACAGAGGTTTCCAAAAAAATGGCGCTAAGG e mm10.chr15 77152112 42 + 104043685 I e canFam3.chr10 40932173 0 - 69331447 C e calJac3.chr1 198308262 0 + 210400635 C e ponAbe2.chr22 30951027 0 + 46535552 C e rheMac3.chr10 80656533 1 + 95678458 I e panTro4.chr22 34537419 0 + 49737984 C e papAnu2.chr10 76339901 0 + 90941950 C e macFas5.chr10 81082728 0 - 96509753 C e chlSab2.chr19 18608090 1 + 33263144 I e nomLeu3.chr7b 100503439 0 - 115148730 C a score=243.000000 s hg38.chr22_KI270876v1_alt 159688 7 + 263666 CCGAGAG s mm10.chr15 77152154 7 + 104043685 CCCAGAT i mm10.chr15 I 42 C 0 e canFam3.chr10 40932173 0 - 69331447 C e calJac3.chr1 198308262 0 + 210400635 C e ponAbe2.chr22 30951027 0 + 46535552 C e rheMac3.chr10 80656533 1 + 95678458 I e panTro4.chr22 34537419 0 + 49737984 C e papAnu2.chr10 76339901 0 + 90941950 C e macFas5.chr10 81082728 0 - 96509753 C e chlSab2.chr19 18608090 1 + 33263144 I e nomLeu3.chr7b 100503439 0 - 115148730 C a score=67.000000 s hg38.chr22_KI270876v1_alt 159695 1 + 263666 C s macFas5.chr10 81082728 1 - 96509753 T i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76339901 1 + 90941950 t i papAnu2.chr10 C 0 C 0 s mm10.chr15 77152161 1 + 104043685 C i mm10.chr15 C 0 C 0 e canFam3.chr10 40932173 0 - 69331447 C e calJac3.chr1 198308262 0 + 210400635 C e ponAbe2.chr22 30951027 0 + 46535552 C e rheMac3.chr10 80656533 1 + 95678458 I e panTro4.chr22 34537419 0 + 49737984 C e chlSab2.chr19 18608090 1 + 33263144 I e nomLeu3.chr7b 100503439 0 - 115148730 C a score=1113.000000 s hg38.chr22_KI270876v1_alt 159696 1 + 263666 A s panTro4.chr22 34537419 1 + 49737984 a i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100503439 1 - 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80656534 1 + 95678458 a i rheMac3.chr10 I 1 C 0 s macFas5.chr10 81082729 1 - 96509753 A i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76339902 1 + 90941950 a i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18608091 1 + 33263144 A i chlSab2.chr19 I 1 C 0 s mm10.chr15 77152162 1 + 104043685 C i mm10.chr15 C 0 C 0 e canFam3.chr10 40932173 0 - 69331447 C e calJac3.chr1 198308262 0 + 210400635 C e ponAbe2.chr22 30951027 0 + 46535552 C a score=3276.000000 s hg38.chr22_KI270876v1_alt 159697 1 + 263666 T s panTro4.chr22 34537420 1 + 49737984 t i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100503440 1 - 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80656535 1 + 95678458 t i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81082730 1 - 96509753 T i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76339903 1 + 90941950 t i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18608092 1 + 33263144 T i chlSab2.chr19 C 0 C 0 s mm10.chr15 77152163 1 + 104043685 T i mm10.chr15 C 0 I 5 s canFam3.chr10 40932173 1 - 69331447 T i canFam3.chr10 C 0 C 0 e calJac3.chr1 198308262 0 + 210400635 C e ponAbe2.chr22 30951027 0 + 46535552 C a score=7771299.000000 s hg38.chr22_KI270876v1_alt 159698 1879 + 263666 AAAGCAGTATTTCAAAAGA--GGTAATTAGACTGATGATGAGGGGATAACACATGGAAGAGAAA-CATTTCAAAAGCTTCTCCGCTTTTCCAAAAGAGGAAGGAGTTTGTTGAAATTTTCTAAACTCAGATTTGGTGAAAAATTACTTTGAAAAGATATA---TTTGAAACT---TCTTTCCTCTGGGTCCCAATGGGAAAAT--ATCCCTACAGGTTTCCCTCCTTCCAAACAGCACTGCAGGGCATTATA-------TAACTAAACAGGATTCCAGCTCCTAAAATGATGCCTC----CATCCTGATAACTAGCTGGCTCTCTCGCCCTCC-GGTGGTTACTGGGAGAGGAA--GAGAAGAGAGAACAC-AAAAAAAGGGCAACCTCCTTAAAAGGAAAGCACTGTCCAGTGATGAAATTT--CCACAGAGCATAGAAACCTGGAGTGAAACTGAT-CTTAAGTCTGAGACTAAAGGATTTGAATGTCCTACAGTGTAAA-TGA---TTTCTCATTGATAAATCAGAGCCTCATCATTTCCTCTTAACCTATACATAAAGGAAAAA--------------------GGGTAATGGAGCGTACAGAAGGATGCTAACAAGAAAAATTGCCTTGCCAGGGAGAACTGTGGAAGAGCATTCACCTTTCCATTTGTCAGGAATGACTTGCTAAAATGCAGATTAGATATTGCCTGGCATAACCAAAAAGAGGCAGGGAGAAAGAGGGGAAAAGGATGAG--GAGAGAAAGGGGGA-TTGAGGGGG--TTGGGGgagagagtgagtgggagtgggagagagagaagagaagagagaaaaacgagaggggagacagagggaggagagGTATCTTCCATTTCCTACTCTCTCTCCTTCAAATGTATTTTAAAGCCTGTGTGATTGTGATTTATACATTCAGATTCGTTCTCCTGTCAAGGAGGGCTCTACCTGCCTCTGTCACACCTGAATGC---------TC---------CTACTGAAAATTTTCTTTGCCAGTAACAAAGGCATGAAAATGAAACATTCTTTTCTAACCTTCATTTTTAATAAGCAGTTTAGAGTAA---CAGCA--AAACTACAATTCCATAGCCAATCCTGAGAAACCAAAGTGAACAAGGAATCAGATTTCCCTATAACACAAATTCTTCTGAAATTCTTAAAAGGAA-----T---CCTGCTCCCCTCTTTTTGGCAGTCTACAAGAATCTCTTCCTACCTCTGCAGTCTTTCTCTCCCTCCCTCTTCTCAGAACCAAGACAAAGAGGTAGACAAATCCCCACAGGGTCTTTCCTGAGCTACAGCTGCACAGTACAGGAAACAGGAATCTGCTATGGAGTTGAGGGA----GGGGGAAGAA---AGGATACGGATACATAACACACAC--------------------------------ATAAACGGACTCAACAGACACAG------ACTTTTCAGCTGATAACAATAAATCTGGTCTGTTCTAAGAAGACAATAATGATTAAAACTCTTCTTACTATACTCCACCCTCAAACCTTTATTTAGATCCCAGAGAGGAGAAAAGAAACATGCCGAGGAAGCACAAATCTTACCTGAGTTACCATTTTCTTTTTCTCCATAAACCAAA-CGGA-TAGATGATAAACCTTTCAAAGCAGCCGTGCTGGGGCACACCTCCACAGCTTTCTTTTCCACCCCCCT-CCCCCCCCAATCTAGCTATTTAAGGGTGGGTAATTGATCTCTCTTTA------TACCGTTTTCCTTCCTTTTTCTTTCTAATGTTTCTTCCTTTCTTTTCTCTTCCTCTCTGGCAGTCTCTCCCCCTCCTTCTTTCTCCAGCTCCCTCCCATATCTCAGGCAGATGGCTGAAGGAAGCCCCACCCCTGAATGCCTAAGGTAATTAATCAGAGTAGAGccccacctcttcctcctccccccaccccctcccAGCAGGCTGACATCTCCCAACTCCAGAAGCAGGCCTGC s panTro4.chr22 34537421 1880 + 49737984 aaaGCAGTATTTCAAAAGA--GGTAATTAGACTGATGATGAGGGGATAACACATGGAAGAGAAA-CATTTCAAAAGCTTCTCCGCTTTTCCAAAAGAGGAAGGAGTTTGCTGAAATTTTCTAAACTCAGATTTGGTGAAAAATTACTTTGAAAAGATATA---TTTGAAACT---TCTTTCCTCTGGGTCCCAATGGGAAAAT--ATCCCTACAGGTTTCCCTCCTTCCAAACAGCACTGCAGGGCATTATA-------TAACTAAACAGGATTCCAGCTCCTAAAATGATGCCTC----GATCCTGATAACTAGCTGGCTCTCTCGCCCTCC-GGTGGTTACTGGGAGAGGAA--GAGAAGAGAGAATAC-AAAAAAAGGGCAACCTCCTTAAAAGGAAAGCACTGTCCAGTGATGAAATTT--CCACAGAGCATAGAAACCTGGAGTGAAACTGAT-CTTAAGTCTGAGACTAAAGGATTTGAATGTCCTACAGTGTAAAATGA---TTTCTCATTGATAAATCAGAGCCTCATCATTTCCTCTTAACCTATACATAAAGGAAAAA--------------------GGGTAATGGAGCGTACAGAAGGATGCTAACAAGAAAAATTGCCTTGCCAGGGAGAACTGTGGAAGAGCATTCACCTTTCCATTTGTCAGGAATGACTTGCTAAAATGCAGATTAGATATTGCCTGGCATAACCAAAAAGAGGCAGGGAGAAAGAGGGGAAAAGGATGAG--GGGAGAAAGGGGGA-TTGAGGGGG--TTGGGGgagagagtgagtgggagtgggagagagagaagagaagagagaaaaacgagaggggagacagagggaggagagGTATCTTCCATTTCCTACTCTCTCTCCTTCAAATGTATTTTAAAGCCTGTGTGATTGTGATTTATACATTCAGATTCGTTCTCCTGTCAAGGAGGGCTCTACCTGCCTCTGTTACACCTGAATGC---------TC---------CTACTGAAAATTTTCTTTGCCAGTAACAAAGGCATGAAAATGAAACATTCTTTCCTAACCTTCATTTTTAATAAGCAGTTTAGAGTAA---CAGCA--AAACTACAATTCCATAGCCAATCCTGAGAAACCAAAGTGAACAAGGAATCAGATTTCCCTATAACACAAATTCTTCTGAAATTCTTAAAAGGAA-----T---CCTGCTCCCCTCTTTTTGGCAGTCTACAAGAATCTCTTCCTACCTCTGCAGTCTTTCTCTCCCTCCCTCTTCTCAGAACCAAGACAAAGAGGTAGACAAATCCCCACAGGGTCTTTCCTGAGCTACAGCTGCACAGTACAGGAAACAGAAATCTGCTATGGAGTTGAGGGA----GGGGGAAGAA---AGGATACGGATACATAACACACAC--------------------------------ATAAACGGACTCAACAGACACAG------ACTTTTCAGCTGATAACAATAAATCTGGTCTGTTCTAAGAAGACAATAATAATTAAAACTCTTCTTACTATACTCCACCCTCAAACCTTTATTTAGATCCCAGAGAGGAGAAAAGAAACATGCCGAGGAAGCACAAATCTTACCTGAGTTACCATTTTCTTTTTCTCCATAAACCAAA-CGGA-TAGATGATAAACCTTTCAAAGCAGCCGTGCTGGGGCACACCTCCACAGCTTTCTTTTCCACCCCCCT-CCCCCCCCAATCTAGCTATTTAAGGGTGGGTAATTGAtctctcttta------taccgttttccttcctttttctttctaatgtttcttcctttcttttctcttcctctctggcagtctctccccctccttctttctccagctccctcccATATCTCAGGCAGATGGCTGAAGGAAGCCCCACCCCTGAATGCCTAAGGTAATTAATCAGAGTAGAGCCCCACCTCTTCCTCCTCCCCCCACCCCCTCCCAGCAGGCTGACATCTCCCAACTCCAGAAGCAGGCCTGC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30951027 1874 + 46535552 AAAGCAGTATTTCAAAAGA--GGTAATTAGACTGATGATGAGGGGATAACACATGGAAGAGAAA-CATTTCAAAAGCTTCTCCACTTTTCCAAAAGAGGAAGGAGTTTGTTGAAATTTTCTAAACTCAGATTTGGTGAAAAATTACTTTGAAAAGATATA---TTTGAAACT---TCTTTCCTCCAGGTCCCAATGGGAAAAT--ATCCCTACAGGTTTCCCTCCTTCCAAACGGCACTGCAGGGCATTATA-------TAACTAAACAGGATTCCAGCTCCTAAAATGATGCCTC----TATCCTGATAGCTAGCTGGCTCTCTCGCCCTCC-GGTGGTGACTGGGAGAGGAA-----AAGAGAGAATAC-AAAAAAAGGGCAACCT-CTTAAAAGGAAAGCACTGTCCAGTGATGAAATTTCCCCACAGAGCACAGAAACCTGGAGTGAAACTGATCCTTAAGTCTGAGACTAAAGGATTTGAATGTTCTACAGTGTAAA-TGA---TTTCTCATTGATAAATCAGAGCCTCGTCATTTCCTCTTAACCTATACATAAAGGAAAAA--------------------GGGTAATGGAGCGTACAGAAGGATGCTAACAAGAAAAATTGCCTTGCCAGGGAGAACTGTGGAAGAGCATTCACCTTTCCATTTGTCAGGAATGACTTGCTAAAATGCAGATTAGATATTGCCTGGCATAACCAAAAAGAGGCagggagaaagaggggaaaaggaggag--gagagaaaggggga-ttgaggggg--ttgggggagagagcgagtgggagtgggagag-----agagaagagagaagaatgagaggggagacagagggagGAGAGATATCTTCCATTTCCTACTCTCTCTCCTTCAAATGTATTTTAAAGGCTATGTGATTGTGATTTATACATTCAGATTCATTCTCCTGTCAAGGAGGGCTCTACCTGCCTCTGTTACACCTGAATGC---------TC---------CTACTGAAAATTTTCTTTGCCAGTAACAAAGCCATGAAAATGAAACATTCTTTCCTAACGTTCATTTTTAATAAGCAGTTTAGAGTAA---CAGCA--AAACTACAATTCCATAGCCAATCCTGAGAAACCAAAGTGAACAAGGAATCAGATTTCCCTATAACACAAATTCTTCTGAAATTCTTAAAAGGAA-----T---CCTGCTCCCCTCTTTTTGGCAGTCTACAGGAATCTCTTCCTACCTCTGCAGTCTTTCTCTCCCTCCCTCTTCTCAGAACCAAGACAAAGAGGTAGACAAATCCCCACAGGGTCTTTCCTGAGCTACAGCTGCACAGTACAGGAAACAGGAATCTGCTATGGAGTTGAGGGA----GGGGGGAGAA---AGGATACGGATACATAACACACAC--------------------------------ATAAACGGACTCAACAGACACAG------ACTTTTCAGCTGATAACAATAAATCTGGGCTGTTCTAAGAAGACAATAATAATTAAAACTCTTCTTACTATACTCCACCCTCAAACCTTTATTTAGATCCCAGAGAGGAGAAAAGAAACATGCCGAGGAAGCACAAATCTTACCTGAGTTACCATTTTCTTTTTCTCCATAAACCAAA-CGGA-TAGATGATAAACCTTTCAAAGCAGCCGTGCTGGGGCACACCTCCACAGCTTTCTTTTCCACCCCCCTCCCCCCCCCAATCTAGCTATTTAAGGGTGGGTAATTGATCTCCCTTTA------TACCGttttccttcctttttctttctaatgtttcttcctttcttttctcttcctctctggcagtctctccccctccttctttctCCAGCTCCCTCCCATATCTCAGGCAGATGGCTGAAGGAAGCCCCACCCCTGAATGCCTAAGGTAATTAATCAGAGTAGAGCCCCACCTCTTCCTCCTCCCCCCACCCCCTCCCAGCAGGCTGACATCTCCCAACTCCAGAAGCAGGCCTGC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100503441 1882 - 115148730 AAAGCAGTATTTCAAAAGA--GGTAATTAGACTGATGATGAGGGGATAACACATGGAAGAGAAA-CATTTCAAAAGCTTCTCCGCTTTTCCAAAAGAGGAAGGAGTTTGTTGAAATTTTCTAAACTCAGATTTGGTGAAAAATTACTTTGAAAAGATATA---TTTGAAACT---TCTTTCCTCCAGGTCCCAATGGGAAAAT--ATCCCTACAGGTTTCCCTCCTTCCAAACAGCACTGCAGGGCATTATA-------TAACTAAACAGGATTCCAGCTCCTAAAATGATGCCTC----TATCCTGATAGCTAGCTGGCTCTCTCGCCCTCC-GGTGGTGACTGGGAGAGGAA--GAGAAGAGAGAATAC-AAAAAAAGGGCAACCTCCTTAAAAGGAAAGCACTGTCCAGTGATGAAATTTCCCCACAGAGCATAGAAACCTGGAGTGAAACTGAT-CTTAAGTCTGAGACTAAAGGATTTGAATGTTGTACAGTGTAAA-TGA---TTTCTCACTGATAAATCAGAGCCTCATCATTTCCTCTTAACCTGTACATAAAGGAAAAA--------------------CGGTAATGGAGCGTACAGAAGGATGCTAACAAGAAAAATTGCCTTGCCAGGGAGAACTGTGGAAGAGCATTCACCTTTCCATTTGTCAGGAATGACTTGCTAAAATGCAGATTAGATATTGCCTGGCATAACCAAAAAGAGGCAGGGAGAAAGAGGGGAAAAGGAGGAG--GAGAGAAAGGGGGATTTGAGGGAC--TTGAGGGAGAGAGTGAGTGGGAGTGGGAGAGAGAGAAGAGAAGAGAGAGGAAAGAGAGGGGAGACAGAGGGAGGAGAGATATCTTCCATTTCCTACTCTCTCTCCTTCAAATGTATTTTAAAGCCTGTGTGATTGTGATTTATACATTCAGATTCGTTCTCCTGTCAAGGAGGGCTCTACCTGCCTCTGTTACACCTGAATGC---------TC---------CTACTGAAAATTTTCTTTGCCAGTAACAAAGCCATGAAAATGAAACATTCTTTCCTAACCTTCATTTTTAATAAGCAGTTCAGAGTAA---CAGCA--AAACTACAATTCCATAGCCAATCCTGAGAAACCAAAGTGAACAAGGAATCAGATTTCCCTATAACACAAATTCTTCTGAAATTCTTACAAGGAA-----T---CCTGCTCCCCTCTTTTTGGCAGTCTACAAGAATCTCTTCCTACCTCTGCAGTCTTTCTCTCCCTCCCTCTTCTCGGAACCAAGACAAAGAGGTAGACAAATCCCCACAGGGTCTTTCCTGAGCTACAGCTGCACAGTACAGGAAACAGGAATCTGCTATGGAGTTGAGGGA----GGGGGAAGAA---AGGATACGGATACATAACACACAC--------------------------------ATAAACGGACTCAACAGACACAG------ACTTTTCAGCAGATAACAATAAATCTGGGCTGTTCTAAGAAGACAATAATAATTAAAACTCTTCTTACTATACTCCACCCTCAAACCATTATTTAGATCCCAGAGAGGAGAAAAGAAACATACCGAGGAAGCACAAATCTTACCTGAGTTACCATTTTCTTTTTCTCCATAAACCAAA-CGGA-TAGATGATAAACCTTTCAAAGCAGCCGTGCTGGGGCACACCTCCACAGCTTTCTTTTCCACCCCCCT-CCCCCCCCAATCTAGCTATTTAAGGGTGGGTAATTGATCTCCCTTTA------CACCGTTTTCCTTCCTTTTTCTTTCTAATGTTTCTTCCTTTCTTTTCTCTTCCTCTCCGGCAGTCTCTCCCCCTCCTTCTTTCTCCAGCTCCCTCCCATATCTCAGGCAGATGGCTGAAGGAAGCCCCACCCCTGAATGCCTAAGGTAATTAATCAGAGTAGAGccccacctcttcctcctccccccaccccctccccGCAGGCTGACATCTCCCAACTCCAGAAGCAGGCCTGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80656536 1873 + 95678458 aaaGCAGTATTTCAAAAGA--GGTAATTAGACTGATGATGAGGGGATAAGACATGGAAGAGAAA-TATTTCAAAAGCTTCTCTGCTTTTCTAAAAGAGGAAGGAGTTTGTTGAAATTTTCTAAACTCAGATTTGGTGAAAAATTACTTTGAAAAGATACA---TTTGAAACTT-CTCTTTCCACCAGGTCACAATGGGAAAAT--CTCCCGACAGGTTTCCCTCCTTCCAAACAGCACTGCAGGGCATTATA-------TAACTAAACAGGATTCCAGCTCCTAAAATGATGCCTC----TATCCTGATAGCTAGCTGGTTCTCTCGCCCTCC-GGTGGTGACTGGGAGAGGAA--GAGAAGAGAGAATACAAAAAAAAGGGCAACCTCCTTAAAAGGAAAGCACTGTCCAGTGATGAAATTTCCCCACAGAGCATAGAAACCTGGAGTGAAACTGAT-CTTAAGTCTGAGACTAAAGGACTTGAATGTTCTATAGTGTAAA-TGA---TTTCTCATGGATAAATCAGAGCCTCATCATTTCCTCTCAACCTATACATAAAGGAAAAA--------------------GGGTAATAGGGCATACAGAAGGATGCTAACAAGAAAAATTGCCTTGCCAGGGAGAACTGTGGAAGAGCATTCACCTTTCCATTTGTCAGGAATGACTTGCTAAAATGCAGATGAGATATTGCCTGGCATAACCAAAGAGAGGCagggagaaagaggggaaaaggaggag--gagagaaaggggga-ttgaggggg--tcgggggagagagtgaggaggagtgggagag-----agagaagagagaagaac--gaggggagagagagggagGAGAGATATCTTCCATTTCCTACTCTCTCTCCTTCAAATGTATTTTAAAGCCTGTGTGATTGTGATGTATACATTCAGATTTGTTCTCCTGTCAAGGAGGGCTCTACCTGCCTCTGTTACACCTGAATGC---------TC---------CTACTGAAAA---TCTTTGCCAGTAACAAAGCCATGAAAATGAAACATTCTTTCCTAACCTTCATTTTTAATAAGCAGTTTAGAGTAA---CAGCA--AAACTACAATTCCATAGCCAATCCTGAGAAACCAAAGTGAATAAGGAATCAGATTTCCCTACAACACAAATTCTTCTGAAATTCTTAAAAGGAA-----T---CCTGCTCCCCTCTTTTTGGCAGTCTACAAGAATCTCTTCCTACCTCTGCAGTCTTTCTCTCCCTCCCTCTTCTCAGAACCAAGACAAAGAGGTAGACAAATCCCCACAGGGTCTTTCCTGAGCTACAGCTGCACAGTACAGGAAACAGGAATCTGCTATGGAGTTGAGGGA----GGGGGAAGAA---AGGATACGGATACATAACACACAC--------------------------------ATAAGCGGACTCAACAGACACAG------ACTTTTCAGCTAATAACAATACATCTGGGCTGTTCTAAGAAGACAATAATAATTAAAACTCTTCTGACTATACTCCACCCTCAAACCTTTATTTAGATCCCAGAGAGGAGAAAAGAAACATACCGAGGAAGCACAAATCTTACCTGAGTTACCATTTTCTTTTTCTCCATAAACCAAA-CGGA-TAGATGATAAACCTTTCAAAGCAGCCGTGCTGGGGCACACCTCCACAGCTTTC-TTTCCACCCCCCT-CCCCCCCCAGTCTAGCTATTTAAGGGTGGGTAATTGATCTCCCTTTA------TACCGttttccttcctttttctttctaatgtttcttcctttcttttctcttcctctctggcagtctctccccctcctcctttctCCAGCTCCCTCCCATATCTCAGGCAGATGGCTGAAGGAAGCCCCACCCCTGAATGCCTAAGGTAATTAATCAGAGTAGAGCCCCACCTCTTCCTCCTCCCCCCACCCCCTCCCAGCAGGCTGACATCTCCCAACTCCAGAAGCAGGCCTGC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81082731 1875 - 96509753 AAAGCAGTATTTCAAAAGA--GGTAATTAGACTGATGATGAGGGGATAAGACATGGAAGAGAAA-TATTTCAAAAGCTTCTCTGCTTTTCCAAAAGAGGAAGGAGTTTGTTGAAATTTTCTAAACTCAGATTTGGTGAAAAATTACTTTGAAAAGATACA---TTTGAAACTT-CTCTTTCCACCAGGTCACAATGGGAAAAT--CTCCCTACAGGTTTCCCTCCTTCCAAACAGCACTGCAGGGCATTATA-------TAACTAAACAGGATTCCAGCTCTTAAAATGATGCCTC----TATCCTGATAGCTAGCTGGTTCTCTCGCCCTCC-GGTGGTGACTGGGAGAGGAA--GAGAAGAGAGAATACAAAAAAAAGGGCAACCTCCTTAAAAGGAAAGCACTGTCCAGTGATGAAATTTCCCCACAGAGCATAGAAACCTGGAGTGAAACTGAT-CTTAAGTCTGAGACTAAAGGACTTGAATGTTCTATAGTGTAAA-TGA---TTTCTCATGGATAAATCAGAGCCTCATCATTTCCTCTCAACCTATACATAAAGGAAAAA--------------------GGGTAATAGGGCATACAGAAGGATGCTAACAAGAAAAATTGCCTTGCCAGGGAGAACTGTGGAAGAGCATTCACCTTTCCATTTGTCAGGAATGACTTGCTAAAATGCAGATGAGATATTGCCTGGCATAACCAAagagaggcagggagaaagaggggaaaaggaggag--gagagaaaggggga-ttgaggggg--ttgggggagagagtgaggaggagtgggagag-----agagaagagagaagaacgagaggggagagagagggaggagagaTATCTTCCATTTCCTACTCTCTCTCCTTCAAATGTATTTTAAAGCCTGTGTGATTGTGATTTATACATTCAGATTTGTTCTCCTGTCAAGGAGGGCTCTACCTGCCTCTGTTACACCTGAATGC---------TC---------CTACTGAAAA---TCTTTGCCAGTAACAAAGCCATGAAAATGAAACATTCTTTCCTAACCTTCATTTTTAAAAAGCAGTTTAGAGTAA---CAGCA--AAACTACAATTCCATAGCCAATCCTGAGAAACCAAAGTGAATAAGGAATCAGATTTCCCTACAACACAAATTCTTCTGAAATTCTTAAAAGGAA-----T---CCTGCTCCCCTCTTTTTGGCAGTCTACAAGAATCTCTTCCTACCTCTGCAGTCTTTCTCTCCCTCCCTCTTCTCAGAACCAAGACAAAGAGGTAGACAAATCCCCACAGGGTCTTTCCTGAGCTACAGCTGCACAGTACAGGAAACAGGAATCTGCTATGGAGTTGAGGGA----GGGGGAAGAA---AGGATACGGATACATAACACACAC--------------------------------ATAAGCGGACTCAACAGACACAG------ACTTTTCAGCTAATAACAATACATCTGGGCTGTTCTAAGAAGACAATAATAATTAAAACTCTTCTGACTATACTCCACCCTCAAACCTTTATTTAGATCCCAGAGAGGAGAAAAGAAACATACCGAGGAAGCACAAATCTTACCTGAGTTACCATTTTCTTTTTCTCCATAAACCAAA-CGGA-TAGATGATAAACCTTTCAAAGCAGCCGTGCTGGGGCACACCTCCACAGCTTTC-TTTCCACCCCCCT-CCCCCCCCAGTCTAGCTATTTAAGGGTGGGTAATTGATCTCCCTTTA------TACCGTTTTCCTTCCTTTTTCTTTCTAATGTTTCTTCCTTTCTTTTCTCTTCCTCTCTGGCAGTCTCTCCCCCTCCTTCTTTCTCCAGCTCCCTCCCATATCTCAGGCAGATGGCTGAAGGAAGCCCCACCCCTGAATGCCTAAGGTAATTAATCAGAGTAGAGccccacctcttcctcctccccccaccccctcccAGCAGGCTGACATCTCCCAACTCCAGAAGCAGGCCTGC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76339904 1874 + 90941950 aaagcagtaTTTCAAAAGA--GGTAATTAGACTGATGATGAGGGGATAAGACGTGGaagagaaa-tatttcaaaagcttCTCTGCTTTTCCAAAAGAGGAAGGAGTTTGCTGAAATTTTCTAAACTCAGATTTGGtgaaaaattactttgaaaagaTACA---TTTGAAACTT-CTCTTTCCTCCAGGTCACAATGGGAAAAT--CTCCCTACAGGTTTCCCTCCTTCCAAACAGCACTGCAGGGCATTATA-------TAACTAAACAGGATTCCAGCTCCTAAAATGATGCCTC----TATGCTGATAGCTAGCTGGTTCTCTCGCCCTCC-GGTGgtgactgggagaggaa--gagaagagagaatac-aaaaaaaGGGCAACCTCCTTAAAAGGAAAGCACTGTCCAGTGATGAAATTTCCCCACAGAGCATAGAAACCTGGAGTGAAACTGAT-CTTAAGTCTGAGACTAAAGGACTTGAATGTTCCATAGTGTAAA-TGA---TTTCTCATGGATAAATCAGAGCCTCATCATTTCCTCTCAACCTATACATAAAGGAAAAA--------------------GGGTAATGGGGCATACAGAAGGATGCTAACAAGAAAAATTGCCTTGCCAGGGATAACTGTGGAAGAGCATTCACCTTTCCATTTGTCAGGAATGACTTGCTAAAATGCAGATGAGATATTGCCTGGCATAACCaaagagaggcagggagaaagaggggaaaaggaggag--gagagaaaggggga-ttgaggggg--ttgggggagacagtgaggaggagtgggagag-----agagaagagagaagaacgagaggggagagagagggaggagagataTCTTCCATTTCCTACTCTCTCTccttcaaatgtattttaaagcctGTGTGATTGTGATTTATACATTCAGATTTGTTCTCCTGTCAAGGAGGGCTCTACCTGCCTCTGTTACACCTGAATGC---------TC---------CTACTGAAAA---TCTTTGCCAGTAACAAAGCcatgaaaatgaaacattctTTCCTAACCTTCATTTTTAATAAGCAGTTTAGAATAA---CAGCA--AAACTACAATTCCATAGCCAATCCTGAGAAACCAAAGTGAATAAGGAATCAGATTTCCCTACAACACAAATTCTTCTGAAATTCTTAAAAGGAA-----T---CCTGCTCCCCTCTTTTTGGCAGTCTACAAGAATCTCTTCCTACCTCTGcagtctttctctccctccctcttctcagAACCAAGACAAAGAGGTAGACAAATCCCCACAGGGTCTTTCCTGAGCTACAGCTGCACAGTACAGGAAACAGGAATCTGCTATGGAGTtgaggga----gggggaagaa---aggaTACGGATACATAACACACAC--------------------------------ATATGCGGACTCAACAGACACAG------ACTTTTCAGCTAATAACAATACATCTGGGCTGTTCTAAGAagacaataataattaaaactctTCTGACTATACTCCACCCTCAAACCTTTATTTAGAtcccagagaggagaaaagaaacataccGAGGAAGCACAAATCTTACCTgagttaccattttctttttctccataaacCAAA-CGGA-TAGATGATAAACCTTTCAAAGCAGCCGTGCTGGGGCACACCTCCACAGCTTTC-TTtccacccccct-ccccccccagTCTAGCTATTTAAGGGTGGGTAATTGATCTCCCTTTA------TAccgttttccttcctttttctttctaatgtttcttcctttcttttctcttcctctctggcagtctctccccctccttctttctccagctccctcccatatctcAGGCAGATGGCTGAAGGAAGCCCCACCCCTGAATGCCTAAGGTAATTAATCAGAGTAGAgccccacctcttcctcctccccccaccccctcccagcAGGCTGACATCTCCCAACTCCAGAAGCAGGCCTGC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18608093 1874 + 33263144 AAAGCAGTATTTCAAAAGA--GGTAATTAGACTGATGATGAGGGGATAAGACATGGAAGAGAAA-TATTTCAAAAGCTTCTCCGCTTTTCCAAAAGAGGAAGGAGTTTGTTGAAATTTTCTAAACTCAGATTTGGTGAAAAATTACTTTGAAAAGATACA---TTTGAAACTT-CTCTTTCCTCCAGGTCACAATGGGAAAAT--CTCCCTACAGGTTTCCCTCCTTCCAAACAGCACTGCAGGGCATTATA-------TAACTAAACAGGATTCCAGCTCCTAAAATGATGCCTC----TATCCTGATAGCTAGCTGGTTCTCTCGCCCTCC-GGTGGTGACTGGGAGAGGAA--GAGAAGAGAGAATAC-AAAAAAAGGGCAACCTCCTTAAAAGGAAAGCACTGTCCAGTGATGAAATTTCCCCACAGAGCATAGAAACCTGGAGTGAAACTGAT-CTTAAGTCTGAGACTAAAGGACTTGAATGTTCTATAGTGTAAA-TGA---TTTCTCATGGATAAATCAGAGCCTCATCATTTCCTCTCAACCTATACATAAAGGAAAAA--------------------GGGTAATGGGGCATACAGAAGGATGCTAACAAGAAAAATTGCCTTGCCAGGGAGAACTGTGGAAGAGCATTCACCTTTCCATTTGTCAGGAATGACTTGCTAAAATGCAGATGAGATATTGCCTGGCATAACCAAagagaggcagggagaaagaggggaaaaggaggag--gagagaaaggggga-ttgagggga--ttggggaagagagtgaggaggagtgggagag-----agagaagagagaagaacgagagaggagagagagggaggagagaTATCTTCCATTTCCTACTCTCTCTCGTTCAAACGTATTTTAAAGCCTGTGTGATTGTGATTTATACATTCAGATTTGTTCTCCTGTCAAGGAGGGCTCTACCTGCCTCTGTTACACCTGAATGC---------TC---------CTACTGAAAA---TCTTTGCCAGTAACAAAGCCATGAAAATGAAACATTCTTTCCTAACCTTCATTTTTAATAAGCAGTTTAGAGTAA---CAGCA--AAACTACAGTTCCATAGCCAATCCTGAGAAACCAAAGTGAATAAGGAATCAGATTTCCCTATAACACAAATTCTTCTGAAATTCTTAAAAGGAA-----T---CCTGCTCCCCTCTTTTTGGCAGTCTACAAGAATCTCTTCCTACCTCTGCAGTCTTTCTCTCCCTCCCTCTTCTCAGAACCAAGACAAAGAGGTAGACAAATCCCCACAGGGTCTTTCCTGAGCTACAGCTGCACAGTACAGGAAACAGGAATCTGCTATGGAGTTGAGGGA----GGGGGAAGAA---AGGATACGGATACATAACACACAC--------------------------------ATAAGCGGACTCAACAGACACAG------ACTTTTCAGCTAATAACAATACATCTGGGCTGTTCTAAGAAGACAATAATAATTAAAACTCTTCTGACTATACTCCACCCTCAAACCTTTATTTAGATCCCAGAGAGGAGAAAAGAAACATACCGAGGAAGCACAAATCTTACCTGAGTTACCATTTTCTTTTTCTCCATAAACCAAA-CGGA-TAGATGATAAACCTTTCAAAGCAGCCGTGCTGGGGCACACCTCCACAGCTTTC-TTTCCACCCCCCT-CCCCCCCCAGTCTAGCTATTTAAGGGTGGGTAATTGATCTCCCTTTA------TACCGTtttccttcctttttctttctaatgtttcttcctttcttttctcttcctctctGGCAGTCTCTCCCCCTCCTTCTTTCTCCAGCTCCCTCCCATATCTCAGGCAGATGGCTGAAGGAAGCCCCACCCCTGAATGCCTAAGGTAATTAATCAGAGTAGAGccccacctcttcctcctccccccaccccctcccAGCAGGCTGACATCTCCCAACTCCAGAAGCAGGCCTGC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198308262 1870 + 210400635 AAAGCAGTATTTCAAAAGA--AGTAGTTAGACTGATGATGAGGGGATAAGACAAGGAAGATAAA-TATTTCAAAAGCTTCTCCACTTTTCCAAAAGGAGGAGGAGTTTGTTGAAAATTTCTAAACTTAGATTTGGTGAAAAATTACTTTGAAAAGATGTA---TTTGAAACTT-CCCTTTCCTCTGGGTCACAATGAGAAAAT--CTCCCTACAGGTTTCCCTCCTTCCAAACAGCACTGCAGGGCATTATA-------TAACTAAACAGGATTCCAGCCCCTAAAATGATGCCTC----TATCCTGATAGCTAGCTGGCTCTCTCGCCCTCCTGGTGGTGACTGGGAGAGGAA--GAGAAGAGAGAATAC--AAAAAAGGGCAACCTCCTTAAAAGGAAAGCACTGTCCAGTGATGAAATTTCCCCACAGAGCATAGAAACCTGGAGTGAAACTGAT-CTTAAGTCTGAGACTAAAGGACTTGAATATTCTACAGCGTAAA-TGA---TTTCTCATTGATAAAGTGGAGCCTCATCATTTCCTCTCAACCTATACATAAAGGAAAAA--------------------GGGTAATGGGGCATACAGACGGATGCTAACAAGAAAAATTGCCTTGCCAGGGAGAACTGTGGAAGAGCGTTCACCTTTCCATTTGTCAGGAATGACTTGCTAAAATGCAGATTAGATATTGCCTGGCATAACCAAagagaggcagggagaaagaggggaaaaggaggaggagagagaaaaggggt-ttggagggggcttgggggagagagtgagtgaaaaagagagaa--------gaggacagaagaatgaaaggggag--agagggaggagagATATCTTCCATTTCCTACTCCCTCTCCTTCAAATGTATTTTAAAGCCTGTGTGTCTGTGATTTATACCTTCAGATTTGTTCTCCTGTCAAAGAGGGCTCTACCTGCCTCTGTTACACCTGGATGC---------TC---------CCACTGAAAATCTTCTTTGCCAGTAACAAAGCCATGAAAATGGAACATTCTTTCCTAACCTTCATTTTTAATAAGGAGTTCAGAGTAA---CAGCA--AAACTACAATTCCATAGCCAATCCTGAGAAACCGAAGTGAATAAGGAATCAGATTTCCCTATAACACAAATTCTTCTGCAATTCTTAAAAGGAA-----T---CCTGCT-CCCTCTTTTTGGCAGTCTACAAGAATCTCTTCCTACCTCTGCAGTCTTTCTCTCCCTCCCTTTTCTCAGAACCAAGACAAAGAGGTAGACAAATCCCCACAGGGTCTTTCCTGAGCTACAGCTGCACAGTACAGGAAACAGGAATCTGCTATGGAGCTGCGGGG----CGGGGGAGAAAGGAGGATATGGATACATAACACACAC--------------------------------ATAAACGGACTCCATTGACACAG------ACTTTTCAGCTGATAACAATAAATCTGGGCTGCTCTAAGAAG---ATAATAATTAAAACTCTTCTTACTATACTCCACCCTCAAACCTTCATTTAGATCCCACAGAAGAGAAGAGAGACATACCGAGGAAGCACAAATCTTACCTGAGTTACCATTTTCTTTTTCTCCATAAACCAAA-CGAA-TAGATGATAAACCCTTCAAAGCAGCCGGGCAGGGGCACACCTCCACAGCTTTCTTTTCCACCCCCCT--CCCCCCCAATCTAGCTATTTGAGGGTGGGTAATTGATCTCCCTTTA------TACCGTtttccttcctttttctttctaatgtttcttcctttctt-----ttcctctctgccagtctctccccctccttctttctCCAGCTCCCTCCCATATCTCAGGCAGATGGCTGAAGGAAGCCCCACCCCTGAATGCCTAAGGTAATTAATCAGAGTAGAGCCCCACCTCTTCCTCCTCCCCCCACTCCCTCCCAGCAGGCTGACATCTCCCAACTCCAGAAGCAGGCCTGC i calJac3.chr1 C 0 C 0 s mm10.chr15 77152169 1739 + 104043685 AATAAAATGGTCCAAAAAACCATTAATTAGATT--CTACAAAGGAGTAAGAAGTATTAAAGAAA----TTTAAGAGTTTCTCTACTTTCCAAA-----GGAGGAACTTCTTGATAATTCCTTAACTCGGATTAGGAGAAAACCCTCCTTGGAAAGATTTATCTTTTGAAATTT-CCCTCTTCTCTGGGTCAGGATGGACTGATTCATCTCTACAGGTTTCCCTCCTTCCAAACAGCACTGCAGGGCATTATATAACATTTAACTAAACAGTGTTCCAGCACCAAAGGCGATGCCTC----TAT-CTGATAGCTTACTG--CCTCTCGCCCTCC-GGTGGTGGCTAGTTGAGAAA--AAGCGGAGAGAATAC-AAAAAAGGGGCAACCTCC--AAAAGGAAAGCACTGTCCAGGGAG--------------------AGAAGCCTAGGGCG-ACCTGGT-CCCAAGTCCGAGACCAAAGGGTTTGAAAAT-CTATCTTGGAAA-AAAGACGTTCT----GATAAGTCACAGCCTCACCACTTTCTTCCGAGGCACAGATTTTTAAAAAGAGGGTGGGGGTGGGGTGGGTGGGTAAAGGAGCA-ACTGGAGGGTGGCAAC----TAAATAGCCCTGCTGGGG------TCGGAAGAACATTCACCTTTCCATCTGCCGGGAATGACTTGCTAAAATGCAGTGCAGAGTCTGCTTGACACAACCAGAGAG-----------------------------G--CAGAGCGAGGGGGT------GGGG--------------------------------------AGAGAAGACAGATGAAG---------------------------ATCTTCCTTCTCCTACTCCATCTCCTTCAAACGTCTTCTAAAGC--GGGCAATCGCCACTTACACGGACACATTTATT---CTATCAGGGAAAGCAGTACCTGCCTCTGCTACACCAAGATGCTCCGTGGGTTC---------CTATGGAAAACATCCTTTGCCAACGACAAAGCCACGGAAAGGAAACATTCTTTCCTAGCCTTCATTTTTGATAATCCGTTTAGAAAGA---AGGCAGCAAAGTGCCATTCTCCAGGCAAGCTGGAGAAACCCCAGT-------GAATCAGCTTCCCCAGC--CACAAATTCTTCTGCAATTCTTAAAAGGAA-----GTCACTCCCTCTCCCCTTTCTGGCAGTCTACAAGAATCTCTTCCTACCTCTGCAGTC--TCTCTCCCTCCCTCTTCTCAGAACCAAGACAAAGAGGTAGACAAATCCCCACAGGCTCTTTCCTGAGCTACAGCTGCACACTACAGGAAACTGGGATCGGCTATGCAGCCGAGGGA----GGGGGAGAAA---AGGGCACG---ATATAGTACACAT----------------------------------------GCTCAAAGG--ACAG------ACACTTCAGCTGATAACAATAAATCTG--CCTTTTTAAGAAGACAACCCTCATTAAAACTTGGCTTACTACACTGCAACCCCAGACCTTTCTGTAGATCCCTGAG------ACAGAAATGTGTGGAGGACATACAAATCTTACCTGAGTTACCATTTTCTTTTTCTCCATAAACCAGA-AGAAGCAGATGATAACCAGTTGGAAGCCGCCGTAGCGGGGCACACCTCTGTGGCTCTC--TGCCACCCCGTC-CCC------AGCTAGCTGGCGAAGGGCGGGTGACGGGCCTCCCTTTA-------AACGTTTTCCTGCctttctctttctagtgtttcttcctttcttttctcttcctctctggcagtctctccccctccttctttctccagctccctcccATATCTCAGGCAGATGGCTGAAGGAAGCCCCACCCCTGAATGCCGAAGGTAATTAATCAGAGTAGAGCCCCACCTCTTCCTCCTCCTCCCAC-CCCTCCCAGCAGGCTGACAGCTCCCAACTCCAGAAGCAGGCCTGC i mm10.chr15 I 5 C 0 s canFam3.chr10 40932174 1860 - 69331447 AAAGCAATATTTCAAAAGA--GTTAATTAGGCTAACAACAAAGGGATAAGAAGTGGAAGAGAAAATATTTCAAAGATTTCTCC-CCTTTCCAAAAGAGG-AGGGGTTTCCTGATAATCTCCAAACTCAGATCTGGTGAAGAATCCCTTTGGAAAACTATATTCTTTGGAACTTCCCCTTCCCTCTAGGTCACGTTGGCAGCAT--CTCCCCAATGCTTTCCCTCCTTCCAAACAGCACTGCAGGGCATTATATAACGTTTAACGGAACAGTGTTCCTGCTCCTAAAATGATGCCCCTCTGTATCCAGATCTCTAGCCGACTCTCTCGCCCTCC-GGTGGTGACTTGGAGAGGAAAAGAGAAAAGAGAATACAAAAAAAGGGGCAAACTCCTTAAAAGGAAAGCACTGTCCAGTGATGAAATTTCCCTACAGAGCATAAAAGCCTGGAGTG------AC-ACTAAGTCTGAGCCTAAAGGAC-AGAACGCTCACCCATGCAAA-TGA---TTTC--ACTGATCAATCGCAGTCTCATCATTCCCTCTCAACCAACGTGAAGGGGAAAAG--------------------AGTAAAAGAAACGTAT-GGAGGGTGCCGACGAGAAACA-GACACGGCCAGGGGGATCCGTGGAAGACGATTCACCTTTCCAATTGTCAGGAATGACTTGCTAAAATGCAGATTAGATATTGCCTGGCATAACCAAAGACAGGCagagagaga-------------------gagagagagagaga-tggagggag-----------------------ggagggagaa-----agag----------------------------------------aTCTTCCATTTCCTACTCCCTCTCCTTCAAATGTCTTTTAATGTCCGTGTGATTGTCATTTATACATTCAAATCTGTTCTCCTCTCACAGAGGGTTCTACCTGCCTCGGCTACACTTGGATAT---------TCCCATAGTTGCTACTGAAAACATTCTTTGCCAGTAACGAAGCCACGAAAATGAAGCCTATTTTTCTAGCCTTCATTTTTAATAAGCCATTTAGAGCAAAGGCAGCA--GAATGGCAATTCCACAGCCAATCCTGAGAAATCACAGTGAATCAGGAATCAGATTTCCCTAGAACACAAATTCTTCTGCAATTCTTAAAAGGAAGTCATT---CCCTTTCCCCTCTTTTTGGCAGTCTGTAAGAATCTCTTCCTACCTCTGCAGTC--TCTCTCCCTCCCTCTTCTCAGAACCAAGACAAAGAGGTAGACAAATCCCCACAGGGTCTTTCCTGAGCTACAGCTGCACAGTACAGGAAACAGGAATCTGCTATGGAGCTGAGGGACAGGGAGAGAAAAA---AGGACACAGATGTATcactcacacacacacacacacacacacacacacacgcatgcacacacatacTCAGCAGACACAGACTAACACTTTTCAGTTGATAACAATAAATCTGGCCTTCTCTGAGAAGACAATCATTGTTAAAACTCTGCCGACCATGCCAGACCCCCAGATCTTTATTTAGATCCCAGAAACCAGAAAAGAGGCACATCGAGGAAACACAAATCTTACCTGAGTGACCATTTTCTTTTCCTCCATAAACCAAACCGCA-CAGAGGATGAGCCCTTCAGGGCGGTCGTGCTGGGGTGCACCTCCACAGCTGCC-------CCCGCCC-CCCCCCCCG--CTAGCTATTTCAGGGTGGACAACTGAtctccctttatccctatcccgctcccctttctttttctttttagcgtttcttcctttcttttctctttctctctggcagcctctccccctccttctctctccagctccctcccATATCTCAGGCAGATGGCTGAAGGAAGCCCCACCCCTGAATGCCTAAGGTAATTAATCAGAGTGGAGCCCCACCTCTTCCTCCTCCCCCCAC-CCCTCCCGGCAGGCTGACATCTCCCAACTCCAGAAACAGGCCTGC i canFam3.chr10 C 0 M 65 a score=286043.000000 s hg38.chr22_KI270876v1_alt 161577 96 + 263666 TGGAGAATGGCAGTTTGG--TGTAC---GCTGTGCGCACGCg--------tgtgtgc----------------gtgtgtgcgtgtgtgtgtgt----------------gtgtgtgtgtgt----------------gtAGGGGGGAGGAGG--------------TAGGG s panTro4.chr22 34539301 112 + 49737984 TGGAGAATGGCAGTTTGG--TGTAC---GCTGTGCGCACGCg--------tgtgtgcgcgcgcgcgcgcgtgtgtgtgtgtgtgtgtgtgtgt----------------gtgtgtgtgtgt----------------gtAGGGGGGAGGAGG--------------GAGGG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30952901 103 + 46535552 TGGAGAATGGCAGTTTAG--TGTGC---GCTGTGCGCACGCg--------tgtgtgc----------------gtgtgtgcgtgtgtgtgtgt----------------gtgtgtgtgtgt----------------AGGGGGAGGAGGGAG-------GGAGAAAGAGGG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100505323 112 - 115148730 TGGAGAACGGCAGTTTGG--TGTGC---ACTGTGCGCACGCg--------tgtgtgt--------------gtgtgtgtgtgtgtgtgtgtgt----------------gtgtgtgtgtgt----------------gtaggggggaggagggagggagggagaaagaggg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80658409 144 + 95678458 TGGAGAATGGCAGTTTGG--TGTGC---GCTGTGCGCACgcgtgtgtgcctgtgtgc----------------gtgtgtgcgtgtgcgtgtgcgtgtgtgtgtgtgtgggtgtgtgtgtgtgtgagagag------agaagtggggaggagggagggagggagaaagaggg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81084606 142 - 96509753 TGGAGAATGGCAGTTTGG--TGTGC---GCTGTGCGCACgcgtgtgtgcctgtgtgc----------------gtgtgtgcgtgtgcgtgtgcgtgtgtgtgtgtgt--gtgtgtgtgtgtgtgagagag------agaaggggggaggagggagggagggagaaagaggg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76341778 120 + 90941950 TGGAGAATGGCAGTTTGg--tgtgc---gctgtgcgcacgcg--------tgtgtgc----------------gtgtgtgcgtgtgcgtgtgc----------------gtgtgtgtgtgtgtgagagag------agaaggggggaggagggagggagggagaaagaggg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18609967 108 + 33263144 TGGAGAATGGCAGTTTGG--TGTGC---ACTGTGCGCACGCg--------tgtgtgc----------------gtgtgtgtgtgtgtgtgtgt----------------gtgtgtgtgt------------------gAaggggggaggagggagggagggagaaagaggg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198310132 112 + 210400635 TGGAGAATGGCAGTTTGG--TGTGC---GCTGTGCGCACGCg--------tgtgtgc----------------gtgtgcgtgtgtgtgtgtgt----------------gtgtgtgtgtatgtgtgtgtg------AGAAGGGGGACGGAGG--------GAGAGAAAGGG i calJac3.chr1 C 0 C 0 s mm10.chr15 77153908 124 + 104043685 TGGAGAATGGCAGTTTGGCCTGTGCTTTACTGTGCGCACGCg--------tgtgtgt----------------gtgagtgagtgagtgagtga----------------gtgtgtgtgtgCATGTGCGCGCGCACACACATAGGGCAGGAGG------GGGAGACTGA-GG i mm10.chr15 C 0 C 0 e canFam3.chr10 40934034 65 - 69331447 M a score=4325135.000000 s hg38.chr22_KI270876v1_alt 161673 1233 + 263666 AGGGGCAAGCGCCATGTGCTGGCATATTTTAAGGA---------TGCGATGATGGAATTAATTATATAGCACTGGAAGCATTCATAGCAGCTTACTATAGTTCATACAGATTTAAGAGATTCCAGCCATGAATGTC-------AAATAAGAAATGAAA--C-AAAATTATTTTTAATATTAATAAAACATTTTTACTGATGTACAGTTTATAGATGC-AGTGGATTTAACAAGAAAGATGTGAAGAAGTGAAAAGCTATTACATGACCACTAACTGGAAGGTTTTTCAAGGAACAGGAATATGCAAGAACTTGCTTGTCCTGGAAGACCAAACCAGCCTAGTGAGAGCAAAGGACTAAAAGAGAGGACACAGGTAATGAGAGGTAATTTAAAT-GATT--TTTTTCCTACTATAAAAAATACCTGGAGACTCTGAAAAAGGTGT--CTACAAATATGACTGCTTAAGAAACTTAAGAGATACACAAAGGTGCATGCAAATT----TGCTTAAGGCTTCCAGCTTCAAT-AAAATTTTGGTTAACTGAAAATTCACCT-TTTGTTTTCTCCAGCCTT--CTATGT----TTCAGCCTTTATTGAAAA-AGGTAAATCCTTTCTTATATAT--ACCCTAGAAAT----------------TTGTGTCATTATTGTA-AATAGTAATTGT---TATAGAATGCTGTAGCTACA---GGTTTAGGAGAATACTGA--C--AATAAGAG-TTTCTTTAAAGTTCTCTTATTAAAATAATATAATTAAAAAATGCATCAAAGATGTGGTTCAGTCCAGAA-G--TTGGTcta-------attctgccctttactagtgatcttggaaaaatct-ttaacctctgaatataaacttca-------taatttccctatttTATATTATCACACATTCAAATA---AAACAATTTATA-AAATGATGAG---------TTTATCAGTTGTCTCATAAAA-TTAAGATTTTCTAA-TTTTTTACAGCATTCTAATAAAT---AGCTCATTCTGAAGGATTTATGAGATATTT-TAGTTATGCTATGTATTTTTAG-GATATACTTTCTAAAAGACTACCCAAAGGTTAAAAAGATTAATTCCAAAATTAAGCTTCCCATTTTTAATTTTTATCTATTTTTATTTTTTACAAGCCCACGGCTAACAACACGAGCTCTC-CATTTAAAAAATAAACATCTACAGAAATCTAAATTCAAAATAACAAATCACACTGAGAATACATAGTTTTTTGCTGTCTCCATAAGGA-CTGTTTGGCAACATGCAGTACCAGGCTTTTAAAAATGTTCTGTA s panTro4.chr22 34539413 1238 + 49737984 AGGGGCAAGCGCCATGTGCTGGCATATTTTAAGGA---------TGCGATGATGGAATTAATTATATAGCACTGGAAGCATTCATAGCAGCTTACTATAGTTAATACAGACTTAAGAGATTCCAGCCATGAATGTC---TAATGAATAAGAAATGAAA--C-aaaattatttttaatattaataaaacatttttaCTGATGTACAGTTTATAGATGC-AGTGGATTTAACAAGAAAGATGTGAAGAAGTGAAAAGCTATTACATGACCACTAACTGGAAGGTTTTTCAAGGAACAGGAATATGCAAGAACTTGCTTGTCCTGGAAGACCAAACCAGCCTAGTGAGAGCAAAGGACTAAAAGAGAGGACAGAGGTAATGAGAGGTAATTTAAAT-GATT--TTTTTCCTACTATAAAAAATACCTGGAGACTCTGAAAAAGGTGT--CTACAAATATGACTGCTTAAGAAACTTAAGAGATACACAAAGGTGCATGCAAATT----TGCTTAAGGCTTCCAGCTTCAATAAAAATTTTGGTTAACTGAAAATTCACCT-TTTGTTTTCTCCAGCCTT--CTATGT----TTCAGCCTTTATTGAAAA-AGGTAAATCCTTTCTTATATAT--ACCCTAGAAAT----------------TTGTGTCATTATTGTA-AATAGTAATTGT---TATAGAATGCTGTAGCTACA---GGTTTAGGAGAATACTGA--C--AATAAGAG-TTTCTTTAAAGTTCTCttattaaaataatataattaaaaaatGCATCAAAGATGTGGTTCAGTCCAGAA-G--TTGGTcta-------attctgccctttactagtgatcttggaaaaatct-ttaacctctgaatataaacttca-------taatttccctatttTATATTATCACACATTCAAATA---AAACAATTTATA-AAATGATGAG---------CTTATCAGTTGTCTCATAAAA-TTAAGATTTTCTAA-TTTTTTACAGCATTCTAATGAAT---AGCTCATTCTGAAGGATTTATGAGATATTT-TAGTTATGCTATGTATTTTTAG-GATATATTTTCTAAAAGACTACCCAAAGGTTAAAAAGATTAATTCCAAAATTAAGCTTCCCatttttaatttttatctatttttattttttaCAAGCCCACGGCTAACAACACGAGCTCTC-CATTTAAAAAATAAACATCTACAGAAATCTAAATTCAAAATAACAAATCACACTGAGAATACATAGTTTTTTGCTGTCTCCATAAGGA-CTGTTTGGCAACATGCAGAATCAGGCTTTTAAAAATGTTCTGTA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30953004 1240 + 46535552 AGGGGCAAACGCCATGTGCTGGCATATTTTAAGGA---------TGCGATGATGGAATTAATTATATAGCACTGGAAGCATTCATAGCAGCTTACTATAGTTAATACAGATTTAAGAGATTCCAGCCATGAATGTC---TAATAAATAAGAAATGAAA--C-aaaattatttttaatattaataaaacatttttaCTGATGTACAGTTTATAGATGC-AGTGGATTTAACAAGAAAGATGTGAAGAAGTGAAAAGCTATTACATGACCACTAACTGGAAGGTTTTTCAAGGAACAGGAATATGCAAGAACTTGCTTGTCCTGGAAGACCAAACCAGCCTAGTGAGAGCAAAGGACTAAAAGAGAGGACAGAGGTAATGAGAGGTAATTTAAAT-GATT--TTTTTCTTACTATAAAAAATACTTGGAGACTCTGAAAAAGGTGT--CTACAAATATGACTGCTTAAGAAACTTAAGGGATACACAAAGGTGCATGCAAATT----TCCTTAAGGCTTCCAGCTTCAATAAAAATTTTGGTTAACTGAAAATTCACCT-TTTGTTTTCTCCAGCCTT--CTACGT----TTCAGCCTTTATTGAAAA-AGATAAATCCTTTCTTATATAT--ACCCCAGAAAT----------------TTGTGTCATTATTGTA-AATAGTAATTGT---TATACAGTGCTGTAGGTACA---GGTTTAGGAGAATACTGA--C--AATAAGAG-TTT-TTTAAAGTTCTCttattaaaataatataattaaaaaatGCCTCAAAGATGTGGTTCAGTCCCGAA-G--TTGGTcta-------attctgccctttactagtgatcttggaaaaatct-ttaacctctgaatataaacttca-------taatttccctatttTATATTATCACACATTCAAATA---AAACAATTTATA-AAATTATGAG---------TTTATCAGTTGTCTCATAAAA-TTAAGATTTTCTAA-TTTTTTACAGCATTCTAATAAATAGAAGCTCATTCTAAAGGATTTATGAGATATTT-TAGTTATGCTATGTATTTTTAG-GATATACTTTCTAAAAGACTACCCAAAGGTTAAAAAGATTAATTCCAAAATTAAGCTTCCCatttttaatttttatctatttttattttttaCAAGCCCACGGCTAACATCACAAGCTCTC-CATTTAAAAAATAAACATCTACAGAAATCTAAATTCAAAATAACAAATCACACTGAGAATACATAGTTTTTTGCTGTCTCCATAAGGA-TTGTTTGGCAACATGCAGAACTAGGCTTTTAAAAATGTTCTGTA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100505435 1236 - 115148730 agggGCAAGCGCCATGTGCTGGCATATTTTAAGGA---------TGCGATGATGGAATTAATTATATAGCACTGGAAGCATTCATAGCAGCTTACTATAGTTAATACAGATTTAAGAGATTCCAGCCATGAATGTC---TAATAAATAAGAAATGAAA--C-AAAATTATTTTTAATATTAATAAAACATTTTTACTGATGTACAGTTTATAGATGC-AGTGGATTTAACAAGAAAGATGTGAAGAAGTGAAAAGCTATTACATGACCACTAACTGGAAGGTTTTTCAAGGAACAGGAATATGCAAGAACTTGCTTGTCCTGGAAGACCAAACCAGCCTAGTGAGAGCAAAGGACTAAAAGAGAGGAGAGAGGTAATGAGAGGTAATTGAAAT-GATT--TTTTTCCTACTATATAAAATACCTGGAGACTCTGAAAAAGGTGT--CTACAAATATGGCTGCTTAAGAAACTTAAGGTATACACAAAGGTGCATGCAAATT----TGCTTAAGGCTTCCAGCTTCAATAAAAATTTTGGTTAACTGAAAATTCACCT-TTTGTTTTCTCCAGCCTT--CTGTGT----TTCAGCCTTTATTGAAAA-AGATAAATCCTTTCTTATATAT--ACCCTAGAAAT----------------TTGTGTCATTATTGTA-AATAGTAATTGT---TATAGAGTGCTGTCGATACA---GGTTTAGGAGAATACTGA--C--AATAAGAG-TTTCTTTAAAGTTCTCTTATTAAA-----ATAATTAAAAAATGCATCAAAGATGTGGTTCAGTCCAGAA-G--TTGGTcta-------attctgccctttactagtgatcttggaaaaatct-ttaacctctgaatataaacttca-------taatttccctatttTATATTATCAAACATTCAAATA---AAACAATTTATA-AAATGATGAG---------TTTATCAGTTGTCTCATAAAA-TTAAGATTTTCTAA-TTTTTTACAGCATTCTAATAAATAGGAGCTCATTCTAAAGGATTTATGAGATATTT-TAGTTATGCTATGTATTTTTAG-GATATACTTTCTAAAAGACTACCCAAAGGTTAAAAAGATTAATTCCAAAATTAAGCTTCCCATTTTTAATTTTTATCTATTTTTATTTTTTACAAGCCCACGGCTAACATCACAAGCTCTC-CATTTAAAAAATAAACATCTACAGAAATCTAAATTCAAAATAACAAATCACACTGAGAATACATAGTTTTTTGCTGTCTCCATAAGGA-TTGTTTGACAACATGCAGAACCAGGCTTTTAAAAATGTTCTGTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80658553 1232 + 95678458 aggAGCAAGCGCCATGTGCTGGCATATTTTAAGGA---------TGCGATGATGGAATTAATTATATAGCACTGGAAGCTTTCATAGCAGCTTACTATAGTTAATACAGATTTAAGAGATTCCAGCCACGAATGTC---TAATAAATAAGAAATGAAA--C-aaaattatttttaatattaataaaacatttttaCTGATGTACAGTTTATAGATGC-AGTGGATTTAATGAGAAAGATGTGAAGACGTGAGGAGCTATTACATGACCACTAACTAGAAGGTTTTTCAAGGAACAGGAATATTCAAGAACTTGCTTGTCCTAGAAGACCAAAACAGCCTAGTGAGAGCAAAGGACGAAAAGAGAGGAGAGAGGTAAAGAGAGTTAATTTAAAT-GATT--TTTATCCTACTACAAAAAA-ACCTGGAGACTCTGAAAAAGGTAT--CTACAACTATGACTACTTAAGAAACTTCAGGTATACACAAAGGTGCATGCAAATT----TCCTTATGGCTTCCAGCTTCAATAAAAATTTTGGTTAACTGAAAATTCACCC-TTTGTTTCCTCCAGCCTT--CTATGT----TTCAGCCTTTATTGAAAA-AGATAAATCCTTTCTTAAATAT--ACCCTGGAAAT----------------TTTTGTCATTATTGTA-AATAGTAATTGT---TACAGAGTGCTGTAGATACA---GGTTTAGGAGAATATTGA--C--AATAAGAG-TTTCTTTAAAGTTCCCTTATTAAA-----ATAATT-AAAAATGCATCAAAGATGTGGTTCAGTCCAGAA-G--TTGGTcta-------attctgccctttactagtgatcttggaaaaatct-ttaacctctGCATATAAACTTCATAATTTTTAATTTTCCTATTTTATATTATAAAACATTCAAATA---AAGCAATTT---------ATAAG---------TTTATCAGTTGTCTCATAAAA-TTAAGATTTTCTAA-TTTTTTACAGCATTCTAATAAATAGGAGCTCATCCTAAAGGATTTATGAGATATTT-TAGTTATGCTATGTATTTTTAG-GATATACTTTCTAAAAGACTACCCAAAGGTTAAAAAGATTAATTCCAAAATTAAGCTTCCCatttttaatttttatctatttttattttttaCAAGCCCACAGCTAACATC-CAAGCTCTC-CATTTAAAAAATAAACATCTACAGAAATGTAAATTCAAAATAGCAAATCACACTGAGAATACATAGTTTTTTGCTGTCTCCATAAGGA-TTGTTTGGCAACATGCAGGACCAGGCTTTTAAAAATGTTCTCTA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81084748 1230 - 96509753 agggGCAAGCGCCATGTGCTGGCATATTTTAAGGA---------TGCGATGATGGAATTAATTATATAGCACTGGAAGCTTTCATAGCAGCTTACTATAGTTAATACAGATTTAAGAGATTCCAGCCACGAATGTC---TAATAAATAAGAAATGAAA--C-AAAATTATTTTTAATATTAATAAAACATTTTTACTGATGTACAGTTTATAGATGC-AGTGGATTTAATGAGAAAGATGTGAAGACGTGAGGAGCTATTACATGACCACTAACTAGAAGGTTTTTCAAGGAACAGGAATATTCAAGAACTTGCTTGTCCTAGAACACCAAAACAGCCTAGTGACAGCAAAGGACGAAAAGAGAGGAGAGAGGTAAAGAGAGTTAATTTAAAT-GATT--TTTATCCTACTACAAAAAA-ACCTGGAGACTCTGAAAAAGGTAT--CTACAACTATGACTACTTAAGAAACTTAAGGTATACACAAAGGTGCATGCAAATT----TCCTTATGGCTTCCAGCTTCAATAAAAATTTTGGTTAACTGAAAATTCACCC-TTTGTTTCCTCCAGCCTT--CTATGT----TTCAGCCTTTATTGAAAA-AGATAAATCCTTTCTTAAATAT--ACCCTGGAAAT----------------TTTTGTCATTATTGTA-AATAGTAATTGT---TACAGAGTGCTGTAGATACA---GGTTTAGGAGAATATTGA--C--AATAAGAG-TTTCTTTAAAGTTCCCTTATTAAAATAATATAATT-AAAAATGCATCAAAGATGTGGTTCAGTCCAGAA-G--TTGGTCTA-------ATTCTGCCCTTTACTAGTGATCTTGGAAAAATCT-TTAACCTCTGCATATAAACTTCA-------TAATTTTCCTATTTTATATTATAAAACATTCAAATA---AAGCAATTT---------ATAAG---------TTTATCAGTTGTCTCATAAAA-TTAAGATTTTCTAA-TTTTTTACAGCATTCTAATAAATAGGAGCTCATCCTAAAGGATTTATGAGATATTT-TAGTTATGCTATGTATTTTTAG-GATATACTTTCTAAAAGACTACCCAAAGGTTAAAAAGATTAATTCCAAAATTAAGCTTCCCATTTTTAATTTTTATCTATTTTTATTTTTTACAAGCCCACAGCTAACATC-CAAGCTCTC-CATTTAAAAAATAAACATCTACAGAAATCTAAATTCAAAATAGCAAATCACACTGAGAATACATAGTTTTTTGCTGTCTCCATAAGGA-TTGTTTGGCAACATGCAGGACCAGGCTTTTAAAAATGTTCTCTA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76341898 1235 + 90941950 aggggcaAGCGCCATGTGCTGGCATATTTTAAGGA---------TGCGATGATGGAATTAATTATATAGCACTGGAAGCTTTCATAGCAGCTTACTATAGTTAATACAGATTTAAGAGATTCCAGCCACGAATgtc---taataaataagaaatgaaa--c-aaaattatttttaatattaataaaacatttttactgaTGTACAGTTTATAGATGC-AGTGGATTTAATGAGGAAGATGTGAAGACGTGAGGAGCTATTACATGACCACTAACTAGAAGGTTTTTCAAGGAACAGGAATATTCAAGAACTTGCTTGTCCTAGAAGACCAAAACAGCCTAGTGAGAGCAAAGGActaaaagagaggagagaggtaaAGAGAgttaatttaaat-gatt--tttatcctACTACaaaaaa-aCCTGGAGACTCTGAAAAAGGTAT--CTACAACTATGACTACTTAAGAAACTTAAGGTATACACAAAGGTGCATGCAAGTT----TCcttatggcttccagcttcaaTAAAAATTTTGGTTAACTGAAAATTCACCC-TTTGTTTCCTCCAGCCTT--CTATGT----TTCAGCCTTTATTGAAAA-AGATAAATCCTTTCTTAAATAT--ACCCTGGaaat----------------ttttgtcattattgtA-AATAGTAATTGT---TACAGAGTGCTGTAGATACA---GGTTTAGGAGAATATTGA--C--AATAAGAG-TTTCTTTAAAGTTcccttattaaaataatataatt-aaaaatgcatCAAAGATGTGGTTCAGTCCAGAA-G--TTGGTCTA-------ATTCTGCCCTTTACTAGTGATCTTGGAAAAATCT-TTAACTTCTGCATATAAACTtca-------taattttcctattttatattataaaacattcaaata---aagcaatttata-aa---ataag---------tttatcAGTTGTCTcataaaa-ttaagattttctaa-ttttttacagCATTCTAATAAATAGGAGCTCATCCTAAAGGATTTATGAGATATTT-TAGTTATGCTATGTATTTTTAG-GATATACTTTCTAAAAAACTACCCAAAGGTTAAAAAGATTAATTCTAAAATTAAGcttcccatttttaatttttatctatttttattttttacaagcccacagctaacatc-caagctctc-catttaaaaaataaacatctacagaaatcTAAATTCAAAATAGCAAATCACACTGAGAATACATAGTTTTTTGCTGTCTCCATAAGGA-TTGTTTGGCAACATGCAGGAccaggcttttaaaaatgttctcta i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18610075 1232 + 33263144 agggGCAAGCGCCATGTGCTGGCATATTTTAAGGA---------TGCGATGATGGAATTAATTATATAGCACTGGAAGCTTTCATAGCAGCTTACTATAGTTAATACAGATTTAAGAGATTCCAGCCATGAATGTC---TAATAAATAAGAAATGAAA--C-AAAATTATTTTTAATATTAATAAAACATTTTTACTGATGTACAGTTTATAGATGC-AGTGGATTTAATGAGAAAGATGTGAAGAAGTGAGGAGCTATTACATGACCACTAACTAGAAGGTTTTTCAAGGAACAGGAATATTCAAGAACTTGCTTGTCCTAGAAGACCAAAACAGCCTAGTGAGAGCAAAGGACTAAAAGAGAGGAGAGAGGTAAAGAGAGTTAATTTAAAT-GATT--TTTATCCTACTACAAAAAA-ACCTGGAGACTCTG-AAAAGGTAT--CTACAACTATGACTACTTAAGAAACTTAAGGTATACACAAAGGTGCATGCAAATT----TCCTTATGGCTTCCAGCTTCAATAAAAATTTTGGTTAACTGAAAATTCACCC-TTTGTTTCCTCCAGCCTT--CTATGT----TTCAGCCTTTATTGAAAA-AAATAAATCCTTTCTTAAATAT--ACCCTGGAAAT----------------TTTTGTCATTATTGTA-AATAGTAATTGT---TACAGAGTGCTGTAGATACA---GGTTTAGGAGAATATTGA--C--AATAAGAA-TTTCTTTAAAGTTCTCTTATTAAAATAACATAATT-AAAAATGCATCAAAGATGTGGTTCAGTCCAGAA-G--TTGGTCTA-------ATTCTGCCCTTTACTAGTGATCTTGGAAAAATCT-TTAACCTCTGCATATAAACTTCA-------TAATTTCCCTATTTTATATTATAAAACATTCAAATA---AAGCAATTTATA-AAATGATAAG---------TTTATCAGTTATCTCATAAAA-TTAAGATTTTCTAA-TTTTTTACAACATTCTAATAAATAGGAGCCCATCCTAAAGGATTTATGAGATATTT-TAGTTATGCTATGTATTTTTAG-GATATACTTTCTAAAAGACTACCCAAAGGTTAAAAAGATTAATTCCAAAATTAAGCTTCCCATTTTAAATTTTTATCTA-----ATTTTTTACAAGCCCACAGCTAACATC-CAAGCTCTC-CATTAAAAAAATAAACATCTACAGAAATCTAAATTCAAAATAGCAAATCACACTGAGAATACATAGTTTTTTGCTGTCTCCATAAGGA-TTGTTTGGCAACATGCAGGACCAGGCTTTCAAAAATGTTCTCTA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198310244 1240 + 210400635 AGGGGCAAGCGCCACGTGCTGGCATATTTTAAGGA---------TGCGATGATGGAATTAATTATATAGCACTACAAGCATTCGTAGCAGCTTACTATAGTTAATACAGATTTAAGAGAGTCCACCCATGAAAGTC---TAATAAATGAGAAGTGAAA--C-aaaattattttttatattaataaaaCATTTGTACTGATACACAGTTTATAGATTC-AGTGAATTTAACAAGAAAGATGTGAAGAAGTGAAAAGCTATCAGATGACCACTAACTAGAAGGTTTTTCAAGGAATAGGAATATGCAAGAACTTGCTTGTCCTGGAAGACCCAATCAGCCTTGTGAGAGCAAAGGACTGTAAGAGAGGAGAGAGGTAATGAGAGGTAATTTAAGTGGGTT--TTTGTCCTACTGTAAAAAA-ACCTGGAGACTCTGAAAAACGTGC--CTACAAATATGACTGCTTAAGAAACTTAAGATATACACAAAGGTGCATACAAATT----TGCTTAAGGCTTACAGCTTCAATAAAAATTTTGGTGAACTGAAAATTCACTC-TTTGTTTTCTCCAGCCTT--CTATGTTTCATTCAGCCTTTATTGAAAA-ATATAAATCCTTTCTTATATGT--GCCCTGGAAAT----------------TTGTGTCATTATTGTA-AATAGTAATTGT---TATGGAGTGCTATAAATACA---GGTTTAGGAGAACACTGA--C--AATAAGAG-TTTCTTTAAAGTTCTCttattaaaataatataattaaaaaCTGCATCAAAGATGTGGTTCAGTCCAGAG-G--TTGGTCTA-------ATTCTGCCCTTAACTGGTGATCTTGAAAAGATCT-TTAACCTCTGAATATAAATTTCA-------TAATTTCCCTATTTTATAGT---AAACATTCAAATA---AAACAATTTATGTAAATGATGAGTTTATGATTTTTATCAGTTGTCTCATAAAA-TTAAGATTCTCTAATTTTTTTAAAGCATTCTAATAAATAGGATCCCATTCTAAAGGATTTATGAGATATTT-TAGTTATGCTATATATTTTTAG-GCTATAACCTCTAAAAGGCTACCCAAAGGTTAAAAAGATTAATTACAAAATTAAGTTTCCCATTTTTA-------------TTTATCTTTTACAGGCCCACAGCTAACATCACAAGCTCTC-CATTTAAAAAATAAACATCTAGAGAAATCAAAATTCAAAACAGCAAATCATACTGACAATACATAGTTTGTTGCTGTCTCCATAAAAA-TTGTTTGGCAACATGCACAACCAGGCTTTTAAAAATGCTCTGTA i calJac3.chr1 C 0 C 0 s mm10.chr15 77154032 1040 + 104043685 AGGGGTAGGCACCATGTGCTGGCATATTATAAGGC---------TGTGATGATGGTATTAATTATATTGCTCTAGAAGCACTTACCACAACTTATTACAGTTAATACAGATTTATGAGATTACGGCCATGAATATCTGATAATAAAGAAGAAATGAAAATT-AAGGTTTTTTC----------------CCCCCAGTGATGGACA-TTTATAGATAAGAGTGGGTCTAAT--GAAAGGTGTGGA---TCGAAAAGCTGCGTGGTGAC--------AGGAAGGTTTTCAAGGA----------------------CAGCGCTCAACGCCAGAGGCAATGTAATGAGGGCATAGGACTGGGAGAG------------AAGGGAGGTCAGTTATGT-GCCTA-TTTTTCTCTCCTCTAGAAA-CCCTAGAGATTCTGAAAAAGGTGTCACCATAAATCTGCCTGCTTGAGGGACACAAGGTGTGCACATC--TGGATGC-------------TGAAGCTCCTCACTTCATT---AGCTCAGGCTGATGGGAACTGC------------TTTCCTGCTTTCGCTGTGT----TTCAGCCTACAGTGAAAA-AGG--ATGCCTTTCCTATATATTCACCCTGGATATCCACCCGCACGGGTACCTGCGTCATTCCTGCACAGTAACAGTTAC---CACAGAGCTCCGAGAACACA-GTGGCTCAGGACAATGTTGACTC--ACCACAAGCCTTCTTTTAAGTCCTCACATTAAAA-----------------GGCTCACAGTGGTGAACTGGGCTGGGGTG--CTGGTCCC-------GTTCTGTTCTGTACTAATGACCTCAGAAAAAAATACTGAATTCTGAACAT-AATTTCA-------TCATCTCTACAT-----------AAAGACTCAATTATGCAAATATTTGATA-AATTTAAGCC---------TTTTGCCACTTTTTCATAAAAGTTAAGATTTTAAAA-T--------GTATTCTGACAAG----ATCCTATCCTAAAG-----ATTACATATAT-TAATTCTTCTATACTCATTGAG---------------------------AGGTAAAAAGGACCAATTGCAAACTTAGCTTT-----------------------------------------Aaaacaaacaaa-caaac-------------aaacaaacaaCC-------CTCAAACTGTGAGTCAGTAATCCCAGTAGTAG-----AGTTTCTTGCTGTCTTCACCAGGA-CTGTCTGGCCCAATGTTGAGTCAGGCTTTTAA------------ i mm10.chr15 C 0 C 0 s canFam3.chr10 40934099 1189 - 69331447 AGGGGCAGGCGCCATGTGCAGGCATATTTTAAGGAATGAATATCTGCTGTGGGGGCATTAATTATATAGCACTGGAAGCATTCACAGCAGCTCAGCATAGTTAGCACAGATTTAAAGCATTCCACCCGTGAATAGC---TGATAA-----TAATGAAA--CAAAAATTATTTTTA-----AAAAGAACATTTCCACTGATGTACAGTTTATAGATGT-AGTCGATTTAAT--GAAAGATGTGAA--------AAGCTGCTGAATGACCACTTAACGGAAGG-TTTTCAAGGCATGGGAATGGGCAAGAACTTGCCTGTCCT--------AAATCAGTCTAGTGATTGT---------CAAGAGAGGA----------GGAAGGTAATCTAAGT-GCTTATTTTTTTCTACTGTAAAGAA--CCTGGGGATTCTGGAAGAGGTGT--CTATAAACATGACTGCTTAAGAAACTGAAAGTGTATACAAAAGTGCATACAGATTTGACTGCTGAAGGCTTCCAGTCTCATTACAAA-TCTGGTTAACTGAGAACCCGCCCTTTTGTGTTCCTACGCCTT-ACTGGAT----TTCAGCCTCCCCTAAGAATCGATAAACCCTCTCCTATATAC--ACACTGGGCAC----------------CTGTGTCATTACTGTA-AATAGTAATTGTTACTACAGAGTGCTATAGATATAAAAGATTTGTGAGAACATTTA--CTGAACATGAG-TTCCTTTAACATTCTCTTATTAAAAtgatataatg-agaaaagcat-aaaggtgtgattcagtctagaa-gtcttggtccaagtcctgattctgccctttacaagtgatcttgttaaagtct-ttaacttcCAAATATAAATTCCA-------TAATCTTCCTATTTTAAATTATTGAATTTTCAAATA---AAATAATCTGTGTAGATGGTGAGTTTATGGCATTTATCATTTATCTCATAAAA-ATGAAGGTTTCCTA-TTTCTTTTAGTATTCTAATAAG----ATCCTATTCTAAAGGATTT------TATTTATATTTTCACTATGATTCTTTATTGTTATAATCTCTAACAGATTACCCAAAGGC-AAAGAGATTAATTCTAAAATTAAGCTTCCTATTTTTAA--------------------------------GATTAACACC-AAAGAAATCaaaatttaaaatcacaaatttaaaaaaattaaa---taaaatCATAAATCACACTGAGAAAAC--AGTGTTTTGCTGTCTCTATGAGGATTTGTTTGGCAAAATGCATAACCAGCCTTTTAAACGTACTGTATA i canFam3.chr10 M 65 C 0 a score=439622.000000 s hg38.chr22_KI270876v1_alt 162906 166 + 263666 TTggccaggcgcagtgtctcatacctgtaatcccagcactttgggaggttaaggctggtggatttcttgggcccagaagctcaagaccagccaaggcaacatgg-caaatccctatctctaTTGTGAATTCAATTTTTAAAATTTTAAAATT----AAAAAAATGTGTTGT s panTro4.chr22 34540651 166 + 49737984 TTggccaggcgcagtgtctcatacctgtaatcccagcactttgggaggttaaggctggtggatttcttgggcccagaagctcaagaccagccaaggcaacatgg-caaatccctatctctaTTGTGAATTCaatttttaaaattttaaaatt----aaaaaaatGTGTTGT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30954244 166 + 46535552 TTggccaggcgcagtgtcacacacctgtaatcccagcactttgggaggttaaggctggcggatttcttgggcccagaagctcaagaccagccaaggcaatgtgg-agaaaccctatctctaTTGTGaattaaatttttaaaatttttaaatt----aaaaaaatGTGTTGT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100506671 167 - 115148730 TTggccaggcacagtgtctcacacctgtaatcccagcactttgggaggttaaggctggcggatttcttgggcccagaagctcaagaccagccaaggcaacatgg-tgaaaccctatctctaTTGTGAATTAAATTTTTAAAATTTTAAAATT---AAAAAAAATGTGTTGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80659785 167 + 95678458 TTggccaggcacagtgtctcacacctgtaatgccagcactttgggaggttaaggctggcggatttcttgagcccagaagctcgagaccagccaaggcaacatgg-caaaaccctgtctctaTTGTGAATTACatttttaaaatttttaaatt---aaaaaaaatGTGTTAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81085978 167 - 96509753 TTggccaggcacagtgtctcacacctgtaatgccagcactttgggaggttaaggctggcggatttcttgagcccagaagctcgagaccagccaaggcaacatgg-caaaaccctgtctctaTTGTGAATTACATTTTTAAAATTTTTAAATT---AAAAAAAATGTGTTAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76343133 167 + 90941950 ttggccaggcgcagtgtctcacacctgtaatgccagcactttgggaggttaaggctggcggatttcttgagcccagaagctcgagaccagccaaggcaacatgg-caaaaccctgtctctattgtgaattacatttttaaaatttttaaatt---aaaaaaaatgtgttat i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18611307 167 + 33263144 TTggccaggcgcagtgtcttacacctgtaatgccagcactttgggaggttaaggctggcagatttcttgagcccagaagctcgagaccagccaaggcaacatgg-caaaaccctgtctctaTTGTGAATTACATTTTAAAAATTTTTAAATT---AAAAAAAATGTGTTAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198311484 171 + 210400635 TTggccaggtgcggtgtctcacacctataatcccagcatttttggaggttaaggcaggaagatttctcgagcccagaagtttgagaccagccagggcaacatggttgaaaccctgtctctaTTGTGaaataaatttttaaattttttaaattaaaaaaaaaaaaatGTTAT i calJac3.chr1 C 0 C 0 s mm10.chr15 77155072 10 + 104043685 -------------------------------------------------------------------------------------------------------------------------------------------------------T----------ATATAACAT i mm10.chr15 C 0 C 0 e canFam3.chr10 40935288 0 - 69331447 C a score=650648.000000 s hg38.chr22_KI270876v1_alt 163072 173 + 263666 ATAACACCATTGGCTGGCACACTGCCAATACAACATCATTACACCCGCTCCTAAATTAATAATCATTTTAACAATTCTGAAAGGAACACAGGAAATACAGGACCATCTGTGGAACCTGGAG---------AAACTGATGTAA-----------------------CATAGTATATCAGGCTCTATTCTGTGCATTTTACAGATAT s panTro4.chr22 34540817 173 + 49737984 ATAACACCATTGGCTGGCACACTGCCAATACAACATCATTACACCCGCTCCTAAATTAATAATCATTTTAACAATTCTGAAAGGAACACAGGAAATACAGGACCATCTGTGGAACCTGGAG---------AAACTGATGTAA-----------------------CATAGTATATCAGGCTCTATTCTGTGCATTTTACAGATAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30954410 173 + 46535552 ATAACACCGTTGGCTGGCACACTGCCAATACAACATCATTACACCCGCTCCTAAATTAATTATCATTTTAACAATTCTGAAAGGAATACAGGAAATACAGGACCATCTGTGGAACCTGGAG---------AAACTGATGTAA-----------------------CATAGTATGTCAGGCTCTTTTCTGTGCATTTTACAGATAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100506838 172 - 115148730 ATAACACCGTTGGCTGGCACACTGCCAATACAACATCATTACACTTGCTCCTAAATTAATAATCATTTTAACAATTCTGAAAGGAACACAGGAAATACAGGACCATCTGTGGAA-CTGGAG---------AAACTGATGTAA-----------------------CATAGTATGTCAGGCTCTATTCTGTGCATTTTACAGATAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80659952 173 + 95678458 ATAACACCGTTGGCTGGCACACTACCAATACAACATCATTACACCCACTCCTAAATTAATAAGCATTTTAACAATTCTGAAAGGAACACAGGAAATACAAGACCATCTGTGGAACCTGGAG---------AAACTGATGTAA-----------------------CATAGTATGTCAGGCTCTATTCTGTGCATTTTACAGATAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81086145 173 - 96509753 ATAACACCGTTGGCTGGCACACTACCAATACAACATCATTACACCCACTCCTAAATTAATAAGCATTTTAACAATTCTGAAAGGAACACAGGAAATACAAGACCATCTGTGGAACCTGGAG---------AAACTGATGTAA-----------------------CATAGTATGTCAGGCTCTATTCTGTGCATTTTACAGATAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76343300 173 + 90941950 ataacACCGTTGGCTGGCACACTGCCAATACAACATCATTACACCCACTCCTAAATTAATAAGCATTTTAACAATTCTGAAAGGAACACAGGAAATACAAGACCATCTGTGGAACCTGGAG---------AAACTGATGTAA-----------------------CATAGTATGTCAGGCTCTATTCTGTGCATTTTACAGATAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18611474 173 + 33263144 ATAACACCGCTGGCTGGCACACTGCCAATACAACATCATTACACCCACTCCTAAATTAATAAGCATTTTAACAATTCTGAAAGGAACACAGGAAATACAAGACCATCTGTGGAACCTGGAG---------AAACTGATGTAA-----------------------CATAGTATGTCAGGCTCTATTCTGTGCATTTTACAGATAC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198311655 166 + 210400635 GTAACA-------CTGGCACACTGCCAATACAACATCATTACACCCACCCCTAAATTAATAATCATTTTAACAATGCTGAAAAGAACAAAGGAACTACAAGACCATCTGTGGAACCTGGAG---------AAACTGATGTAA-----------------------CATAGTATGTCAGGCTCTCTTATGTACATTTTACAGATAT i calJac3.chr1 C 0 C 0 s mm10.chr15 77155082 172 + 104043685 GTAATACCATTGGTTAGCACTTTGCCAATACAACACCACCATGTTCTCTC---ACTCACCAGTTATTTTAATAATTCCAAAAAGAATGCAAAGACAATAGAACCATGAACAAACTCTGGAGACCACAGTCAGGTCTGTGTAA-----------------------TG------GGCAGAAGCTGGCCT-CGTGTTTTACAGATAT i mm10.chr15 C 0 I 245 s canFam3.chr10 40935288 192 - 69331447 ATAATAATGTGGGTTGGCACATTGCCAATACAACATCATCATGCTCCTACCCAAATTAATAATCATTTCAACAATTCTGAAAAGAACACAGAAAGTACCAG----TCTGGAGATCTTGCAG---------AAACTGGCATTAATTATAGCTacttactgaatacctacaataagtcaggcactattctgggcattttacaaatat i canFam3.chr10 C 0 C 0 a score=74768.000000 s hg38.chr22_KI270876v1_alt 163245 21 + 263666 ---CTGTATACTTGTGGCATAATC s panTro4.chr22 34540990 21 + 49737984 ---CTGTATACTTGTGGCATAATC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30954583 21 + 46535552 ---CTGTATACTTGTGGCATAATC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100507010 21 - 115148730 ---CTGTATACTTGTGGCATAATC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80660125 21 + 95678458 ---CTGTATACTTGTAGTATAATC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81086318 21 - 96509753 ---CTGTATACTTGTAGTATAATC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76343473 21 + 90941950 ---CTGTATACTTGTAGTATAATc i papAnu2.chr10 C 0 I 318 s chlSab2.chr19 18611647 21 + 33263144 ---CTGTATACTTGTAGTATAATC i chlSab2.chr19 C 0 I 307 s calJac3.chr1 198311821 21 + 210400635 ---CTGTATACTTGTGGTATAATC i calJac3.chr1 C 0 C 0 s canFam3.chr10 40935480 24 - 69331447 ttacattatacttttggaataatc i canFam3.chr10 C 0 C 0 e mm10.chr15 77155254 245 + 104043685 I a score=10467.000000 s hg38.chr22_KI270876v1_alt 163266 4 + 263666 --CATA s panTro4.chr22 34541011 4 + 49737984 --CATA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30954604 4 + 46535552 --CATA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100507031 4 - 115148730 --CATA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80660146 4 + 95678458 --CATA i rheMac3.chr10 C 0 I 437 s macFas5.chr10 81086339 4 - 96509753 --CATA i macFas5.chr10 C 0 I 301 s papAnu2.chr10 76343812 4 + 90941950 --cata i papAnu2.chr10 I 318 C 0 s chlSab2.chr19 18611975 4 + 33263144 --cATA i chlSab2.chr19 I 307 C 0 s calJac3.chr1 198311842 4 + 210400635 --CATA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40935504 4 - 69331447 ctca-- i canFam3.chr10 C 0 C 0 e mm10.chr15 77155254 245 + 104043685 I a score=470873.000000 s hg38.chr22_KI270876v1_alt 163270 151 + 263666 --------GTAATAATTTTAAAAAGAATGAGATCTTCAAATATTAGG----AAAAACGC-----TGAGTAAAGTAATATAga-taagtactaggcctgttcttatttaacactttttagaagtgacctggaacacagaatatatagtactctctgaatttgcaactgaA s panTro4.chr22 34541015 151 + 49737984 --------GTAATAATTTTAAAAAGAATGAGATCTTCAAATATTAGG----AAAAACGC-----TGAGTAAAGTAATATAga-taagtactaggcctgttcttatttaacactttttagaagtgacctggaacacagaatatatagtactctctgaatttgcaactgaA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30954608 151 + 46535552 --------GTAATAATTTTAAAAAGAATGAGATCTTCAAATATTAGG----AAAAATGC-----TGAGTAAAGTAATATAga-taagtactaggcctgttcttatttaacactttttagaagtgacctggaacacagaatatatagtactctctgaatttgcaactgaA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100507035 135 - 115148730 --------GTAATAATTTTAAAAAGAATGAGATCTTCAAATATTAGG----AAAAATGC-----TGAGTAAAGTAATATAGA-TAAGTACTAGGCCTGTTCTTACTTAACACTTTTTAGAAGTGACCTGGA----------------ACTCTCTAAATTTGCAACCGAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80660587 149 + 95678458 --------GTAATAATTTTAAAAAGAATGAGATCTTCAAATA--AAG----AAAAATGC-----TGGGTAAAGTAATATAga-taagtattaggcctgttcttatttaacactttttagaagtgacctggaacacagaatatatagtactctctgaatttgcaactgaA i rheMac3.chr10 I 437 C 0 s macFas5.chr10 81086644 151 - 96509753 --------GTAATAATTTTAAAAAGAATGAGATCTTCAAATATTAAG----AAAAATGC-----TGGGTAAAGTAATATAga-taagtattaggcctgttcttatttaacactttttagaagtgacctggaacacagaatatatagtactctctgaatttgcaactgaa i macFas5.chr10 I 301 C 0 s papAnu2.chr10 76343816 151 + 90941950 --------gtaataatttttaaaagaatgagatcttcaaatattaag----aaaaatgc-----tGGGTAAAGTAATATAGA-TAAGTATTAGGCCTGTTCTCATTTAACACTTTTTAGAAGTGACCTGGAACACAGAATATATAGTACTCTCTGAATTTGCAACTGAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18611979 152 + 33263144 --------GTAATAATTTTAAAAAGAATGAGATCTTCAAATATTAAG----AAAAATGC-----TGGGTAAAGTAATATAGATTAagtactaggcctgttcttatttaacactttttagaagtgacctggaacacagaatatatagtactctctgaatttgcaactgaa i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198311846 138 + 210400635 --------ATCACAATTTAAAAAAGAATGAGATATAAAAATATAAGG----AAAAATGC-----TGAGTAAAGTAATATATA-TCAGTACTAGGCCTGTTCTTATTTAACACTTTTTCGAAG-----------ACAGAATATATAGTA--CTCTGAATTTGTAACTGAA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40935508 164 - 69331447 atgaACAAAGAAATATGTACCAAAGAATGGGATTTTTAAACATTAGGGGGTAAAAATACCACTATCAGAAAAGGA--ATgga-tcagtaccaggtttgttcttatttaaca-tttctagaaatgatctggaa-ataggaCATACTGCATTTTAATAATTTGCAACTGAA i canFam3.chr10 C 0 C 0 e mm10.chr15 77155254 245 + 104043685 I a score=618055.000000 s hg38.chr22_KI270876v1_alt 163421 178 + 263666 AAGCCAATCAGAAGGAGA------TAAAAAGCAGTCAAATT-----------------------------------------------TT-CTAAAGACAAAGTGAGTAAGCAGAAA---ATGGGCAGGTGAGTTTCACT-GGAAGCAAGAGCAACCCAG----------------TGTATTTTTGGAAAAAATCTTGAATCATACTAATGGGATAACTGTGTTTTCAGTTC--TAATAATTGAAATAAACCTC s panTro4.chr22 34541166 178 + 49737984 AAGCCAATCAGAGGGAGA------TAAAAAGCAGTCAAATT-----------------------------------------------TT-CTAAAGACAAAGTGAGTAAGCAGAAA---ATGGGCAGGTGAGTTTCACT-GGAAGCAAGAGCAACCCAG----------------TGTATTTTTGGAAAAAATCTTGAATCATACTAATGGGATAACTGTGTTTTCAGTTC--CAATAATTGAAATAAACCTC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30954759 179 + 46535552 AAGCCAATCAGAAGGAGA------TAAAAAGCAGTCAAATT-----------------------------------------------TTCCTAAAGACAAAGTGAGTAAGCAGAAA---ATGGGCAGGTGAGTTTCACT-GGAAGCAAGAGCAACCCAG----------------TGTATTTTTGGAAAAAATCCTGAATCATACTAATGGGATAATTGTGTTTTCAGTTC--TAATAACTGAAATAAACCTC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100507170 180 - 115148730 AAGGCAATCAGAAGGAGA------TAAAAAGCAGTCAAATT-----------------------------------------------TTCCTAAAGACAAAGTGAGTAAGCAGAAA---ATGGGCAGGTGAGTTTCACTGGGAAGCAAGAGCAACCCAG----------------TGTATTTTTGGAAAAAATCTTGAATCATACTAATGGGATAATTGTGTTTTCAGTTC--TAATAATTGAAATAAACGTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80660736 179 + 95678458 AAGCCAATCAGAAGGAGA------TAAAAAGCAGTCAAATT-----------------------------------------------TTCTTAAAGACAAAGTGAGTAAGCAGAAA---ATGGGCAGGTGAGTTTCACT-GGAAGCAAGAGCAACCCAG----------------TGTATTTTTGGAAAAAATCTTGAATCATACTAATGTGATAATTGTGTTTTCAGGTT--TAATAATTGGAATAAACCAC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81086795 179 - 96509753 aagccaatcagaaggaga------taaaaagcagtcaaatt-----------------------------------------------ttcttaaagacaaagtgagtaagcagaaa---atgggcaggtgagtttcact-ggaagcaagagcaacccag----------------tgtatttttggaaaaaatcttgaatcatactaatgggataatTGTGTTTTCAGGTT--TAATAATTGGAATAAACCAC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76343967 179 + 90941950 AAGCCAATCAGAAGGAGA------TAAAAAGCAGTCAAATT-----------------------------------------------TTCTTAAAGACAAAGTGAGTAAGCAGAAA---ATGGGCAGGTGAGTTTCACC-AGAAGCAAGAGCAACCCAg----------------tgtatttttggaaaaaatcttGAATCATACTAATGGGATAATTGTGTTTTCAGGTT--TAATAATTGGAATAAACCAC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18612131 179 + 33263144 aagccaatcagaaggaga------taaaaagcagtcaaatt-----------------------------------------------ttcttaaagacaaagtgagtaagcagaaa---atgggcaggtgagtttcact-ggaagcaagagcaacccag----------------tgtatttttggaaaaaatcttgaatcatactaatgggataatTGTGTTTTCAGGTT--TAATAATTGGAATAAACCAC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198311984 170 + 210400635 AAGCCAATCAGAAGGAGA------TAAAAAGCAGTCAAATT-----------------------------------------------TTCTTAA----------AGTAAGTAGAAA---ATGGGCAGGTGAGGTTCACT-GGAAGCAACAGCAACACAG----------------TGTATTTTTGGAAAAAATC-TAAATCATATTAATGGCATAATTGTGTTTTCAGTTCTATATTAATTGAAATAAACCTC i calJac3.chr1 C 0 C 0 s mm10.chr15 77155499 225 + 104043685 AAGCAAACAAAAATGGGAGAGGAGTAGAAGACCATAAAATTAACACCTTTATAAATATGCCAAAGTCTGAAAATCCAGACATCAAAAAATTTAAAAGGCAAAGTAAGAAAGAAGAAA-----GGGTAGGC-----------AAAAGC-AGGGCAAGGCAATGATTCCAATCTTTCCTGTACTTTAAGAAAAA------AGTCATATTTATG----AAATGTGTTTTCAGCTT--GGATATATAAAATAAACCTG i mm10.chr15 I 245 C 0 s canFam3.chr10 40935672 174 - 69331447 AAGCCAATCAG---GAGA------AAAAATACAATCAAATT-----------------------------------------------TT-TTAAAAATACAGCA--TAAGCAGAAAAGAAGAGGTAGATGAATTTCACT-GGAAGCAAAGGCAACCCAG----------------TGTACTTTTTGAAAAA--TCTAAACCACATTTATGGGATAATTATGTTCTCAGTTC--TAATATAATAAATAAACCTC i canFam3.chr10 C 0 I 35 a score=243878.000000 s hg38.chr22_KI270876v1_alt 163599 87 + 263666 AGAATCACTGTGTATCAT---TCTCTGAATCCTCTGGTTTATTACACTATTCTTGACAAAAAGCCTGGGGCACTAAGAAGATAGCATCTC s panTro4.chr22 34541344 87 + 49737984 AGAATCACTGTGTATCAT---TCTCTGAATCCTCTGGTTTATTACACTATTCTTGACAAAAAGCCTGGGGCACCAAGAAGATAGCATCTC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30954938 87 + 46535552 AGAATCACTGTATATCAT---TCTCTGAATCCTCTGGTTTATTACACTATTCTTGACAAAAAGCCCGGGGCACCAAGAAGATAGCATCTC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100507350 87 - 115148730 AGAATCACAGTATATCAT---TCTCTGAATCCTCTGGTTTATTACACTATTCTTGACAAAAAGCCTGAGGCACCAAGAAGATAGAAGCTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80660915 87 + 95678458 GGAATCACTGTATATCAT---TCTCTGCATCCTCTGGTTTATTACACTATTCTTCACAGAAAGCCTGGGGCACCAAGAAGATAGAATCCC i rheMac3.chr10 C 0 I 14 s macFas5.chr10 81086974 87 - 96509753 GGAATCACTGTATATCAT---TCTCTGCATCCTCTGGTTTATTACACTATTCTTCACAGAAAGCCTGGGGCACCAAGAAGATAGAATCCC i macFas5.chr10 C 0 I 9 s papAnu2.chr10 76344146 87 + 90941950 GGAATCACTGTATATCAT---TCTCTGCATCCTCTGGTTTATTACACTATTCTTCACAGAAAGCCTGGGGCACCAAGAAGATAGAAtccc i papAnu2.chr10 C 0 I 4 s chlSab2.chr19 18612310 87 + 33263144 AGAATCACTGTATATCAT---TCTCTGCATCCTCTGGTTTATTACACTATTCTTCACAGAAAGCCTGGGGCACCAAGAAGACAGAATCCC i chlSab2.chr19 C 0 I 14 s calJac3.chr1 198312154 87 + 210400635 AGAATCACTATATATCAA---TCTCTGAATGCCCTCGTTCATTACACTGTTCTCAACAAAAATCCAGGGGCACAAAGAAGACAGACTACC i calJac3.chr1 C 0 I 1 s mm10.chr15 77155724 57 + 104043685 AAGGTCCTCGTATAGCATGGGTTTTTGAATCA----------------------AACAAAAAGCTGCAAGCACCAGACA----------- i mm10.chr15 C 0 C 0 e canFam3.chr10 40935846 35 - 69331447 I a score=4370.000000 s hg38.chr22_KI270876v1_alt 163686 11 + 263666 CCCCACAATGT s panTro4.chr22 34541431 11 + 49737984 CCCCACAATGT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30955025 11 + 46535552 CCCCACAGTGT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100507437 11 - 115148730 CCCAGCAATGT i nomLeu3.chr7b C 0 I 5 s macFas5.chr10 81087070 6 - 96509753 CCCCAC----- i macFas5.chr10 I 9 C 0 s papAnu2.chr10 76344237 10 + 90941950 ccccaccccg- i papAnu2.chr10 I 4 C 0 s calJac3.chr1 198312242 7 + 210400635 CCCCACC---- i calJac3.chr1 I 1 C 0 e mm10.chr15 77155781 0 + 104043685 C e canFam3.chr10 40935846 35 - 69331447 I e rheMac3.chr10 80661002 14 + 95678458 I e chlSab2.chr19 18612397 14 + 33263144 I a score=13297.000000 s hg38.chr22_KI270876v1_alt 163697 7 + 263666 CCCCCGC s panTro4.chr22 34541442 7 + 49737984 CCCCTGC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30955036 7 + 46535552 CCCCCGC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100507453 7 - 115148730 CCCCCAC i nomLeu3.chr7b I 5 C 0 s rheMac3.chr10 80661016 7 + 95678458 CCCTCAC i rheMac3.chr10 I 14 C 0 s macFas5.chr10 81087076 6 - 96509753 -CCTCAC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76344247 7 + 90941950 ccctcaC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18612411 7 + 33263144 CCCTCAC i chlSab2.chr19 I 14 C 0 s calJac3.chr1 198312249 7 + 210400635 CCAACAA i calJac3.chr1 C 0 C 0 e mm10.chr15 77155781 0 + 104043685 C e canFam3.chr10 40935846 35 - 69331447 I a score=798064.000000 s hg38.chr22_KI270876v1_alt 163704 258 + 263666 CC---CCATCCTTAGAAAAGCAGCAGCTACCTTGACACTTAGGTGTGACTGCAGCCTCCATACATCATGGAAAGAGACAAGGCCCCAAGGAGttttt-ttgttttgttttattttgttttTAAAGAAAAGGGCAAATGAGGGGTCCCCACATGC-AAAA-AGTCCAAGACTAGG------ATAAAGGTTTCCTCAGG-CCAGGAATTCATGCTACTTTTCTACATTTAgaaccaatattttacagtgcaaata---ggctta-aaaatttattac s panTro4.chr22 34541449 255 + 49737984 CC---CCATCCTTAGAAAAGCAGCAGCTACCTTGACACTTAGGTGTGACTGCAGCCTCCATACATCATGGAAAGAGACAAGGCCCCAAGGAGTTTTT----TTTTGTTTTATTTTGTTTTTAAAGAAAAGGGCAAATGAGGGGTCCCCACATGC-AAAA-AGTCCAAGACTAGG------ATAAAGGTTTCCTCAGG-CCAGGAATTCATGCTACTTTTCTACATTTAgaaccaatattttacagtgcaaata---ggctta-aaaatttattac i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30955043 259 + 46535552 CC---CCATCCTTTGAAAAGCAGCAGCTACCTTGACACTTAGGTGTGACTGCAGACTCCATACATCTTGGAAAGAGACAACGCCCCAAGGAgttttttttgttttgttttattttgttttTAAAGAAAAGGGCAAATGAGGGGTCCCCACATGC-AAAA-AGTCCAAGACTAGG------ATAAAGGTTTCCTCAGG-CCAGGAATTCATGCTACTTTTCTACATTTAGAACCAATATTTCACAGTGCAAATA---GGCTTA-AAAATTTATTAC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100507460 261 - 115148730 CCCCGCCATCCTTAGAAAAGCAACAGCTACCTTGACACTTAGGTGTGACAGCAGCCTCCATACATCTTGGAAAGAGACAAGGCCCCAAGGAGttttt-ttgttttgttttattttgtttttAAAGAAAAGGGCAAATGAGGGGTCCCCACATTC-AAAA-AGTCCAAGACTAGG------ATAAAGGTTTCCTCAGG-CCAGGAATTCATGCTACTTTTCTTCATTTAgaaccaatattttacagtgcaaata---ggctta-aaaatttattac i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80661023 226 + 95678458 AC---CTATCCTTAGAAAAGCAGCAGCTACCTTGACGCTTAGGTGTGACTGCAGCCTCTATACATCTTG------------GCCCCAAGGAGTTTTT----------TTTGTTTTGTTTTTA-----------AAATGAGGGGTCCCCACATGC-AAAA-AGTCTAAGACTAAG------ATAAAAGTTTCCTCGGG-CCAGGGATTCATGCTACTTTTCTACATTTAGAACCAATATTTCCCAATGCAaata---ggctta-aaaatttattac i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81087082 226 - 96509753 AC---CTATCCTTAGAAAAGCAGCAGCTACCTTGACGCTTAGGTGTGACTGCAGCCTCTATACATCTTG------------GCCCCAAGGAGTTTTT----------TTTGTTTTGTTTTTA-----------AAATGAGGGGTCCCCACATGC-AAAA-AGTCTAAGACTAAG------ATAAAAGTTTCCTCGGG-CCAGGGATTCATGCTACTTTTCTACATTTAGAACCAATATTTCCCAATGCAaata---ggctta-aaaatttattac i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76344254 226 + 90941950 AC---CTATCCTTAGAAAAGCAGCAGCTACCTTGACGCTTAGGTGTGACTGCAGCCTCTATACATCTTG------------GCCCcaaggagttttt----------tttgttttgttttta-----------aaatgaggggTCCCCACATGC-AAAA-AGTCTAAGACTAGG------ATAAAGGTTTCCTCGGG-CCAGGGATTCATGCTACTTTTCTACATTTAGAACCAATATTTCCCAATGCAAATA---GGCTTA-AAAATTTATTAC i papAnu2.chr10 C 0 I 311 s chlSab2.chr19 18612418 236 + 33263144 AC---CTATCCTTAGAAAAGCAGCAGCTACCTTGATGCTTAGGTGTGACTGCAGCCTCTATACATCTTG------------GCCCCAAGGAG-TTTT----------TTTGTTTTGTTTTTAAAGCAAAGGGCAAATGAGGAGTCCCCACATGC-AAAA-AGTCTAAGACTAGG------ATAAAGGTTTCCTCGGG-CCAGGGACTCATGCTACTTTTCTACATTTAGAACCAATATTTCCCAATGCAAATA---GGCTTA-AAAATGTATTAC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198312256 259 + 210400635 CC---TTGTCCTTAGAAAAGCAGCAGCTATCTTGATGCTTAGGTATGACTGCAGCCTCTATACATCTTGGAAAGAGACAAGGCCCCAAGGTATTTTA-TTGTTTTGTTTTATTTTGTTTTTAAAGAAAAGGGCAAATGAGGAGTTCCCATATGCAAAAA-AGTCTAAGACTAGG------ATAAAGGTTTCCTCAGG-CCAGGGATTCATGCTACTTTTCTATATTTAGAACAACTATTTTACAATGCAAATA---GGCTTA-AAATTTTATTAC i calJac3.chr1 C 0 C 0 s mm10.chr15 77155781 210 + 104043685 ------------------------AGCTACTTGGATGCTTGTGTGTCACTTCAGTCCCC-----TCCTATAAAGA----------CAAGAGGACTTT---------------TTTTTTTTTAATAAAAAGGA-AAATGACAGGTTCTCATAAGC-AAAAGAGTGGATAACT--G------ATAAAGGTTTCTACAGGCCCAGAAACTTAAACTGCATTTTaatacacagaattaatattttatactgcaaataatgggctta-aaaattcattac i mm10.chr15 C 0 I 4 s canFam3.chr10 40935881 260 - 69331447 ---cGCTATCCTTATGAAAGCTGTAGTTATTTTGAAGCTTGTCTGTGACTGCAGCCTCCATACATAAAGACAGACAACAAGGCCCCAAGAAAATACt---------ttttaaaaaatttttaaataaaGAGGCAAATGAGGAATCTCTACATGC-AAAA-AGCCCAGGATTAGGGCTGGAACACAAATTGCCTTTGG-CCTGGTATTCATGCCAATTTTGTACGTACAGGACCAACattttatactgcaaataataagcttacaagagtcattac i canFam3.chr10 I 35 I 5 a score=1838639.000000 s hg38.chr22_KI270876v1_alt 163962 539 + 263666 aggaaagaattggtacaagctt----aaaaaaaatgttacaatgatttttataaactcactgaatgacaggctcatagtgaggtct-gactggcacaatgatattttgaagtgtgtcc-------------ctGGTATT----------ATAGAGGACAATTTGCTCCCTGGTGTCCAAGAGAGAGAAGAGCAATTGAGCAGCCTGGGTCTGACCCAGCAA---AAC---TGGAGTCCCCTGGTGGCTGAATGTGCCCGGTAATGTACCAAGGAGAAAATCATTTTAGGACATTTCC----T-GTAT-GTGTGTTTGGGAGGAGAGAGACAGGCAGGGGCT---GGGAAGCTTTGGAACAGGGTGGGCACGATGAGat-gtcagctaatgaaggaggccctgcct----tctccatggacaaatcccc------agctttcaggacagtgtctgggacgtggtaagtactcaagaaatatttattaaataaacaaatGAAGGaaagaggtacttctccctgtagtctcaactctttg-----------agtgtttcatccaatctccagaaccccagcttcctttcctccatactactcaattg s panTro4.chr22 34541704 550 + 49737984 aggaaagaagtggtacaagctt----aaaaaaaatgttacaatgatttttataaactcactgaatgacaggctcatagtgaggtct-gactggcacaatgatattttgaagtgtgtcc-------------ctGGTATT----------ATAGAGGACAATTTGCTCCCTGGTGTCCAAGAGAGAGAAGAGCAATTGAGCAGCCTGGGTCTGACCCAGCAA---AAC---TGGAGTCCCCTGGTGGCTGAATGTGCCCGGTAATGTACCAAGGAGAAAATCATTTTAGGACATTTCC----T-GTAT-GTGTGTTTGGGAGGAGAGAGACGGGCAGGGGCT---GGGAAGCTTTGGAACAGGGTGGGCACGATGAGat-gtcagctaatgaaggaggccctgcct----tctccatggacaaatcccc------agctttcagcacagtgtctgggacgtggtaagtactcaagaaatatttattaaataaacaaatGAAGGAAAGAGGTACTTCTCCCTGTAGTCTCAACTCTTTGATTGTTTCCTCAGTGTTTCATCCAATCTCCAGAACCCCAGCTTCctttcctccacactactcaattg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30955302 550 + 46535552 AGGAAAGAATTGGTACAAGCTT----AAAAAAAATGTTACAATGATTTTTATAAACTCACTGAATGACAGGCTCATAGTGAGGTCT-GACTGGCACAATGATATTTTGAAGTGTGTCC-------------CTAGTATT----------ATAGAGGACAATTTGCTCCCTGGTGTCCAAGAGAGAGAAGAGCAATTGAGCAGCCTGGGTCTGACCCAGCAA---AAC---TGGAGTCCCCTGGTGGCTGAATGTGCCCGGTAATGTACCAAGGAGAAAATCATTTTAGGACATTTCC----T-GTAT-GTGTGTTTGGGAGGACAGAGACAGGCAGGGGCT---GGAAAGCTTTGGAACAGGGTGGGCAcaatgagat-gtcagctaatgaaggaggccctgcct----tctccatggacaaatcccc------agcttccagcacactgtctgggacatggtaagtactcaagaaatatttattaaataaacaaatGAAGGAAAGAGGTACTTCTCCCTGTAGTCTCAACTCTTTGATTGTTTCCTCAGTGTTTCATCCAATCTCCAGAACCCCAGCTTCctttcctccatactactcaattg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100507721 549 - 115148730 agggaagaattggtacaagctt--aaaaaaaaaaagttacaatgatttttataaactcactgaatgacaggctcatagtgaggtct-gactggcaca---atattttgaagtgtgtcc-------------ctGGTATT----------ATAGAGGACAATTTGCTCCCTGGTGTCCAAGAGAGAGAAGAGCAATTGAGCAGGCTGGGTCTGACCCAGCAA---AAC---TGGAGTCCCCTGGTGGCTGAATGTGCCCGGTAATGTACCAAGGAGAAAATCATTTTAGGACATTTCC----T-GTAT-GTGTGTTTGGGAGGAGAGAGACAGGCAGGGGCT---GGGAAGCTTTGGAACAGGGTGGGCACGATGAGat-gtcagctaatgaaggaggccctgcct----tctccatggacaaatcccc------agcttccagcacagtgtctgggacgtggtaagtactcaacaaatatttattaaataaacaaaCGAAGGAAAGAGGTACTTCTCCCTGTAGTCTCAACTCTTTGATTGTTTCCTCAGTGTTTCATCCAACCTCCAGAACCCCAGCTTCctttcctccatactactcaattg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80661249 541 + 95678458 aagaaagaattggtacaagctt---aaaaaaaaaagttacaatgatttttctaaactcactgaatgacagactcatagtgaggtct-gactggcacaatgatattttgaagtgtgtcc-------------ctggcatt----------ATAGAGGACAATTTGCTCCCTGGTGTCCAAGAGAGAGAAGAGCAATTGAGCAGCCTGGGTCTGACCCAGCAA---AAC---TGGAGTCCCCTGGTGGCTGAATGTGTCCGGTAATGTACCAAGGAGAAAATCATTTTAGGACATTGCC----T-GTAT-GTGTGTTTGGGAGGAGAGAGACAGGCAGGGGCT---GGGAAGCTTTGGAACAGGGTGGGCACAATGAGAT-GTCAGCTAATGAAGGAGGC------------CTACATAGACCAatcccc------agcttccagcacagtgtctggaacctggtaagtactcaagaaatagttattaaataaacaaatGAAGGAAAGAGGCACTTCTCCTTATAGTCTCAACTC--TGATTGTTTCCTCAGTGTTTCATCCAATCTCCAGAACCCCAGCTTCctttcctccatattactcaattg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81087308 541 - 96509753 aagaaagaattggtacaagctt---aaaaaaaaaagttacaatgatttttctaaactcactgaatgacagactcataatgaggtct-gactggcacaatgatattttgaagtgtgtcc-------------ctggcatt----------ATAGAGGACAATTTGCTCCCTGGTGTCCAAGAGAGAGAAGAGCAATTGAGCAGCCTGGGTCTGACCCAGCAA---AAC---TGGAGTCCCCTGGTGGCTGAATGTGTCCGGTAATGTACCAAGGAGAAAATCATTTTAGGACATTGCC----T-GTAT-GTGTGTTTGGGAGGAGAGAGACAGGCAGGGGCT---GGGAAGCTTTGGAACAGGGTGGGCACAATGAGAT-GTCAGCTAATGAAGGAGGC------------CTACATAGACCAatcccc------agcttccagcacagtgtctggaacctggtaagtactcaagaaatagttattaaataaacaaatGAAGGAAAGAGGCACTTCTCCTTATAGTCTCAACTC--TGATTGTTTCCTCAGTGTTTCATCCAATCTCCAGAACCCCAGCTTCctttcctccatattactcaattg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76344791 543 + 90941950 aagaaagaattggtacaagctta-aaaaaaaaaaagttacaatgaTTTTTATAAACTCACTGAATGACAGACTCATAGTGAGGTCT-GGCTGGCACAATGATATTTTGAAGTGTGTCC-------------CTGGCATT----------ATAGAGGACAATTTGCTCCCTGGTGTccaagagagagaagagcaatTGAGCAGCCTGGGTCTGACCCAGCAA---AAC---TGGAGTCCCCTGGTGGCTGAATGTGTCCGGTAATGTACCAAGGAGAAAATCATTTTAGGACATTGCC----T-GTAT-GTGTGTTTgggaggagagagacaggcaggggct---gggaagCTTTGGAACAGGGTGGGCACAATGAGAT-GTCAGCTAATGAAGGAGGC------------CTACATAGACCAATCCCC------AGCTTCCAGCACAGTGTCTGGAACGTGGTAAGTACTCAAGAAATagttattaaataaacaaatgaaggaaAGAGGCACCTCTCCTTATAGTCTCAACTC--TGATTGTTTCCTCAGTGTTTCATCCAATCTCCAGAACCCCAGCTTCCTTTCCTCCATATTACTCAATTG i papAnu2.chr10 I 311 C 0 s chlSab2.chr19 18612654 541 + 33263144 AAGAAAGAATTGGTACAAGCTT---AAAAAAAAAAGTTACAATGATTTTTATAAACTCACTGAATGACAGACTCATAGTGAGGTCT-GACTGGCACAATGATATTCTGAAGTGTGTCC-------------CTGGCATT----------ATAGAGGACAATTTGCTCCCTGGTGTCCAAGAGAGAGAAGAGCAATTGAGCAGCCTGAGTCTGACCCAGCAA---AAC---TGGAGTCCCCTGGTGGCTGAATGTGCCCGGTAATGTACCAAGGAGAAAATCATTTTAGGACATTGCC----T-GTAT-GTGTGTTTGGGAGGAGAGAGACAGGCAGGGGCT---GGGAAGCTTTGGAACAGGGTGGGCACAATGAGAT-GTCAGCTAATGAAGGAGGC------------CTACATAGACCAatcccc------agcttccagcacagtgtctggaacgtggtaagtactcaagaaatagttattaaataaacaaatGAAGGAAAGAGGCACTCCTCCTTATAGTCTCAACTC--TGATTGTTTCCTCAGTGTTTCATTCAATCTCCAGAACCCCAGCTTCctttcctccatactactcaattg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198312515 548 + 210400635 ATGAAATAATTGGTATGAGCTA------AAAAAATGTTATAATGATTTTTATAAACTCACTGAATGACAGGCTCATAGTGAGGTCT-GACTGGCACAATGATATTCTGAAGTGTGTCC-------------CTGGCATT----------ATAGAGGACAATTTGCTCCCTGGTGTCTGAGAGAGAGAAGAGCAATTGAGCAGCCTGGGTCTGACCCAGCAA---AAC---TGGAGTCCCCTAGTGGCTGAATGTGCCTGGTAATGTACCAAGGAGAAAATCATTTTAGAACATTTCCTGTAT-GTAT-GTGTGTTTGGGAGGAGAGGAACAGGCAGAAGCTGGAGGAAAGCTCTGGAACAGGGTGGGCACAGTGAGat-gtcagctcatgaaggagggcctgcct---atctacatggaccaagccct------agcctctggcacagtgcctgggacatggtaagtgctcaaaaaatatttattaaataaacaaatGAAGaaaagaggcatttctccttatagtctcaattctttaactgtttcctcaatgtttcatctaatctccacaacctcagct--------tccatactattcaattg i calJac3.chr1 C 0 I 320 s mm10.chr15 77155995 512 + 104043685 agggacaa-----tataagctaa-aaataaaatatgcagaaatgatttgtataaagtgtctgaacaacaggatcaATGTGAGCCCC-GGC-----CAGTGGTATTCTAACGTGTGTCC-------------CTGACTTTAAAGGCTCCCAGAGAGGACGACTTGCTCTTTGGTGCCCAAGAGATAGAAAGGCAAGTCAACAGCTCGAGTCTGACCCAGCAAAACAAC---TCAAGT-CCCTGGTGGCTG------------AATGTACCAAGGAAAAGCTCACTT---GACCGTTTC----T-GTCT-TTCTCCT--GGAATGGAAAGACAGAC-GGGGTT---GGAGGGATGGGGA----GGTGGGCAGAGCACAATAGTCA-------AAGAAGATCATGGAG-TGACCCTGATGGAATAA-CTCT------GGCTTTCAGCAGTCtgcctgg-acatgggaggtactcaagaaagatttgctgaataaacaaaGGACAG-----GGTACTTTGT------GTCTCAGCTTCTTGATGGTTTCCTTGGCATCTC----AGTCCTCAGAACTCC-GCTTCCTTTCTTTTCTGCTGCTCAACTG i mm10.chr15 I 4 C 0 s canFam3.chr10 40936146 460 - 69331447 ggaaaagaattaatatgagctaatgtcaaaataaatatacaacgattttcataaactcactgaataacaggatcat--tgagcactggacaaactcaaggatattttgaagtgtgtccctgacTGTCAAGGCTGGCATT----------ATAGAGGACAATTTGCTCCCTGATGCCCAAGAGAGAGAAGAGCAACTGAACTGCCTGGACCTGACCCAGCAA---AACAAGTGGCGTCCCCTAGTGGCCGGATATGCCCCGTAGTGTACCAAGGAGCAACTAATCCCAAGGCATTTTC----TAGTACAGAATATCTGGGATTTAGgggatc-------cct---gggtggctcag--------------cagtttagc-gcctgcctttggcccagggcgtgatcctggggtcctgggatcaagtcccgcatcagactccctgcatagagcctg---------------------------------------------------------cttctcc------------ctc--tgtctgt----------------------------atctctgcctctctctctct-catgaataaataa i canFam3.chr10 I 5 C 0 a score=422115.000000 s hg38.chr22_KI270876v1_alt 164501 138 + 263666 aaatttaccttactgaag--------------tcactgaaga-cctccaaatcatg------gccaaatttaatggacattttatgtcttctttgatttgtctgtggtatttggcattccctcctttgggaaactctc----actcttaacttaa----aatgatac s panTro4.chr22 34542254 138 + 49737984 aaatttaccttactgaag--------------tcactgaaga-cctccaaatcatg------gccaaatttaatggacattttatgtcttctttgatttgtctgtggtatttggcattccctcctttgggaaactctc----actcttaacttaa----aatgatac i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30955852 138 + 46535552 aaatttaccttactgaag--------------tgactgaaga-cttccaaatcatg------gccaaattcaatggacattttatgtcttctttgatttgtctgtggtatttggcattccctcctttgggaaactctc----actcttaacttaa----aatgatac i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100508270 138 - 115148730 aaatttaccttactgaag--------------tcactgaaga-cctccaaatcatg------gccaaattcaatggacattttatgtcttctttgattcgtctgtggtatttggcattccctcctttgggaaactctc----actcttaacttaa----aatgatac i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80661790 134 + 95678458 aaatttacctgattaaag--------------tcaccaaaga-cctccagatgatg------gccaaattcaatggacattttatgtcttctttgattcgtctgtggtatttggtattc---cctttgggaaactctc----actcttaacttaa----aatgata- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81087849 134 - 96509753 aaatttacctgattaaag--------------tcaccgaaga-cctccagatgatg------gccaaattcaatggacattttatgtcttctttgattcgtctgtggtatttggtattc---cctttgggaaactctc----actcttaacttaa----aatgata- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76345334 134 + 90941950 AAATTTACCTGATTGAAG--------------TCACCGAAGA-CCTCCAGATGATG------GCCAAATTCAATGGacattttatgtcttctttgattCGTCTGTGGTATTTGGTATTC---CCTTTGGGAAACTCTC----ACCCTTAACTTAA----AATGATA- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18613195 134 + 33263144 aaatttacctgattgaag--------------tcaccgaaga-cctccagatgatg------gccaaattcaatggacattttatgtcttctttgatttgtctgtggtatttggtattc---cctttgggaaactctc----acttttaacttaa----aatgata- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198313383 136 + 210400635 aaatttaccttactgaag--------------tcaccaaaga-cctccaaatgatg------gccaaattcaaaggacatcttaagtattctttgatttatctgtggtatttggcattcccttctttaggaaa--ctc----actcgtagcttaa----aatggtat i calJac3.chr1 I 320 C 0 s mm10.chr15 77156507 134 + 104043685 AAATTCATCTCAAT-CAG--------------TCAGTTAGGA-TCTCCAGGTGATG------ACCACATTCAACAGACATGTCATGTCTTTCGTGACATTTCTGTGGCATTTGG-ATTCCTGACTTTGGGAAA--CTC----ACCCTTAGCTTCA----AATGATGC i mm10.chr15 C 0 I 108 s canFam3.chr10 40936606 151 - 69331447 aatctttttttaaaaaaaaGAAAATCTGGGATTCTCCCAAGATCCTCCTTCTCACTCAACACACCAAACCAGAAGCAAGTCCT--------TTTGATT--TCTGTGAAACCTACCCTTTCTTTCT------AACCCCCTAGTACTATAAACTCAGCTCTAGTCATAT i canFam3.chr10 C 0 C 0 a score=43689.000000 s hg38.chr22_KI270876v1_alt 164639 19 + 263666 cagtctttcttaactttcc---- s panTro4.chr22 34542392 19 + 49737984 cagtctttcttaactttcc---- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30955990 19 + 46535552 cagtctttcttaactttcc---- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100508408 19 - 115148730 cagtctttcttaactttcc---- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80661924 15 + 95678458 ----ctttcttgactttcc---- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81087983 15 - 96509753 ----ctttcttgactttcc---- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76345468 15 + 90941950 ----CTTTCTTGACTTTCC---- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18613329 15 + 33263144 ----ctttcttgactttcc---- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198313519 19 + 210400635 cagtctttcttgacttttc---- i calJac3.chr1 C 0 C 0 s canFam3.chr10 40936757 20 - 69331447 ---TATTTTGTATCTAGCCTTCT i canFam3.chr10 C 0 C 0 e mm10.chr15 77156641 108 + 104043685 I a score=651741.000000 s hg38.chr22_KI270876v1_alt 164658 216 + 263666 tctttccctgttcaccctcttc-----------------------------------------tccatcgtactcttcttcctcctctaccatcctctcaattgttgttgttacttgcaaggtgtcatcctcagatctcttttTACTGCACACC-AGAGGTTCTTAACCCAAAGTGCATGGTTCCTAACACAGGCACCCCAGTAGaaatttttcttatatgcatttccacgcag----agaggatctgt-ag-tatttatcaga s panTro4.chr22 34542411 213 + 49737984 tctttccctgttcaccctcttc-----------------------------------------tccgtcgtactcttct---tcctctaccatcctctcaattgttgttgttacttgcaaggtgtcatcctcagatctcttttTACTGCACACC-AGAGGTTCTTAACCCAAAGTGCATGGTTCCTAACATAGGCACCCCAGTAGaaatttttcttatatgcatttccatgcag----agaggatctgt-ag-tatttatcaga i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30956009 214 + 46535552 tctttccctgttcaccctcttc-----------------------------------------cccatcgtactcttct---tcctctaccatcctctcaattgttgttgttacttgcaaggtgtcatcctcagatctcttttTACTGCACACC-AGAGGTTCTTAACCCAAAGTGCATGGTTCCTAACACAGGCACCCCAGTGGaaatttttcttatatgcatttccatgcag----agaggatctgtaag-tatttatcaga i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100508427 210 - 115148730 tctttccctgttcaccctcttc-----------------------------------------tccatcgtactcttct---tcctctaccatcctcccaa---ttgttgttacttgcaaggtgtcatcctcagatctcttttTACTGCACCCc-aaaggttcttaacccaaagtgcatggttcgtaacataggcaccccagtggaaatttttcttgtatgcatttccatgcag----agaggatctgc-ag-tatttatcaga i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80661939 213 + 95678458 tctttccctgttcacccgcttc-----------------------------------------tccatcttactcttct---tcctctaccatcctctcaactgttattattacttgcaaggtgtcatcctcagatctcttttTACTGCACACC-AGAGGTTCTTAACCCAAAGTGCATGGTTCCTAACATGGGCAGCCCAGTGGAAATTTTTCTTCTTtgcatttccatgcag----agaggatctgt-ag-tatttatcaga i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81087998 213 - 96509753 tctttccctgttcacccgcttc-----------------------------------------tccatcttactcttct---tcctctaccatcctctcaactgttattattacttgcaaggtgtcatcctcagatctcttttTACTGCACACC-AGAGGTTCTTAACCCAAAGTGCATGGTTCCTAACATGGGCAGCCCAGTGGAAATTTTTCTTCTTtgcatttccatgcag----agaggatctgt-ag-tatttatcaga i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76345483 213 + 90941950 TCTTTCCCTGTTCACCCGCTTC-----------------------------------------TCCATCTTACTCTTCT---TCCTCTACCATCCTCTCAACTGTTATTATTACTTGCAAGGTGTCATCCTCAGATCTCTTTTTACTGCACACC-AGAGGTTCTTAACCCAAAGTGCATGGTTCCTAACATGGGCAGCCCAgtggaaatttttcttctttgcatttccatGCAG----AGAGGATCTGT-AG-TATTTATCAGA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18613344 213 + 33263144 tctttccctgttcacccgcttc-----------------------------------------tccatcttactcttct---tcctctaccatcctctcaactgttattattacttggaaggtgtcatcctcagatctcttttTACTGCACACC-AGAGGTTCTTAACCCAAAGTGCATGGTTCCTAACATGGGCAGCCCAGTGGAAACTGTTCTTCTTtgcattcccatgcag----agaggatctgt-ag-tatttatcaga i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198313538 214 + 210400635 tttttccctcttaaccgccttc-----------------------------------------cccatcatactcttct---tcctctattagcctctcaattgttgttgttacttac-aggttttatcctcagatctcctttTACTGGACACCAAGAGGTTCTTAACCCAAAGTGCATGGTTCCTAACATAGGCACCCCAGtggaaatttttgttacatgcatttccatgcag----agaagatctgt-agttatttatcaga i calJac3.chr1 C 0 C 0 s mm10.chr15 77156749 243 + 104043685 CCTTCAGCTGTTTACCCGCCTCAAAGGGGGGTGGGGATATTCCAGTCTTTCCTGATTTTTCTTTCCCTTGTTCATTTCC---TCCCTTTGCACCCTCTGAA-TGCTGTTACTGCATG--GGGTGCCATCCTCTG-TTTTGTTTTAGTACAACTA-GGAATTTATTCACCCAAAGTTCATAGCTCCTCATAGCAGCACCCCAGTGAAAATGTTTTTTTT-----TTTCTGTGCAG----AGGGGAGCCA--GG-TATTT-TCAGA i mm10.chr15 I 108 I 1721 s canFam3.chr10 40936777 190 - 69331447 ---------ACTCGCCCCTTTC-------------------------------------TGCCTCCAATCTACCACTCC---TGCTATCCGAGCTGCTCAACC-------TTACTGAGGGGACCTCGTTTT----TTTTTTTTTACTGTTTTTG-GGGGGGACCTCTTTCTAAGTGCAAATCCCACCATGCCATTTCCCTGATTAAAA------TTATCAACCATTCTCCACAGCCTAAAAGGAAGGAA-AG-TCCTAA----- i canFam3.chr10 C 0 C 0 a score=553808.000000 s hg38.chr22_KI270876v1_alt 164874 198 + 263666 ttctcaaaagggtccaaacctcaaagaagttaaCATTGCTGACCACActtgctcaaggtgttccaactcattctatcacttcagttaccaagaatttaccctgacggctcccacatttctatttttgagcacatacatctcttctgaacaccatgtttctat-----------------tctttttcccttgaatatggccgactatatgggtta s panTro4.chr22 34542624 188 + 49737984 ttctcaaaagggtccaaacctcaaagaagttaaCATTGCTGAccacacttgctcaaagtgttccaactcattctatcacttcagttaccaagaatttaccctgacggctcccacatttctatttttgagcccatacatctcttctgaacaccaTG---------------------------ttttcccttgaatatggccgactatatgggtta i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30956223 198 + 46535552 ttctcaaaagggtccaaacctcaaagaagttaaCATTGCTGAccacacttgctcaaggtgttccaactcattctatcacttcagttaccagcagtttaccctgacggctcccacatttctatttttgagcccatacatctcttctgaacaccaTGTTTctat-----------------tcttcttcccttgaacatggccgactatatgggtta i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100508637 186 - 115148730 ttctcaaaagggtccaaacctcaaagaagttaaCATTGCTGACCACACTTGCTCAAGGTGTTCCAACTCATTCTGTCACTTCAGTTACCAGGAATTTACCCTGACGGCTCCCACATTTCTATTTTTGAGCCCATACATCT------------ATGTTTctat-----------------tcttcttcccttgaatatggccgactatatgggtta i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80662152 195 + 95678458 ttctcaaaagggtctgaacctccaagaagttaaCAGTGCTGAccacacttgctccaggtgttccaactcattctgtcacttcagttaccaagaatttaccctgacggctcccacatttctatttttcagcccatacatctcttctgaacaccatgtttctgt--------------------tcttcccttgaatatggccaactatatgggtaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81088211 195 - 96509753 ttctcaaaagggtctgaacctccaagaagttaaCAGTGCTGAccacacttgctccaggtgttccaactcattctgtcacttcagttaccaagaatttaccctgacggctcccacatttctatttttcagcccatacatctcttctgaacaccatgtttctgt--------------------tcttcccttgaatatggccaactatatgggtaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76345696 193 + 90941950 TTCTCAAAAGGGTCTGAACCTCCAAGAAGTTAACATTGCTGACCACACTTGCTCCAGGTGTTCCAACTCATTCTGC--CTTCAGTTACCAAGAATTTACCCTGACGGCTCCCACATTCCTATTTTTCAGCCCATACATCTCTTCTGAACACCATGTTTCTGT--------------------TCTTCCCTTGAATATCGCCAACTATATGGGTAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18613557 195 + 33263144 ttctcaaaagggtctgaacctccaagaagttaaCATTGCTGAccacacttgctccaggtgttccaactcattctgtcacttcagttaccaagaatttaccgtgacggctcccacatttctatttttcagcccatacatctcttctgaacaccaTGTTTCTAT--------------------TCTTCCCTTGAATATGGCCAATTATATGGGTAa i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198313752 197 + 210400635 ttctcacaagggtccAAAACTCGACGAAGTTAACACTGctaaccacacttgctccaggtgttccaactcattccatcacttcagttaccacaaatttactctgacagctgccacatttcta-ttttgaacccacacatctcttctgaacaccaTGTTTCTGT-----------------TTTTATTCCCTTGAATATGGCCGActatatggctaa i calJac3.chr1 C 0 C 0 s canFam3.chr10 40936967 185 - 69331447 TTCTTAAGTAGGTGCCTAccac--ataatctggc----ctcaccatacgagtcagagtccctgcttcccttcctgccac--------cca-----ctgctct--ctgctcccagcacgctg------aacc---acattccccaacgacactatgtttctgttcatttttgtttcgcattcttgctcccttgaccacggccttctatctggctaa i canFam3.chr10 C 0 I 8 e mm10.chr15 77156992 1721 + 104043685 I a score=1122208.000000 s hg38.chr22_KI270876v1_alt 165072 309 + 263666 ttcatccttcaaggcttacttcagaaatcccctactccagaaagcctttcctgaccctacttg-ctccc-acatctggtttaggta-cccttatctgtgagcatactttaccttagca----cctaatccatggtacataacggttggagttactg-ttctgcataactatgactagactatgagcagtctgagggtagaaatcatgt--tttatactatatccccagttcttaacccagtatctgaatacacagtaa-------------atga-----atgtttgttgaaATCAAACAATAATGCCTTGATTTCTATTACTCTAGCCATTTATTT s panTro4.chr22 34542812 310 + 49737984 ttcatccttcaaggcttacttcagaaatcccctactccagaaagcctttcctgaccctacttg-ctccc-acatctggtttaggtaccccttatctgtgagcatactttaccttagca----cctaatccatggtacataacggttggagttactg-ttctgcataactatgactagactatgagcagtctgagggtagaaatcatgt--tttatactatatccccagttcttaacccagtatctgaatacacagtaa-------------atga-----atgttggttgaaATCAAACAATAATGCCTTGATTTCTATTACTCTAGCCATTTATTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30956421 309 + 46535552 ttcatccttcaaggcttacttcagaaatcccctactccagaaagcctttcctgaccctacttg-ctccc-acatctggtttaggtaccccttatctgtgagcatactttaccttagca-----ctaatccatggtacataacggttggagttactg-ttctgcataactatgactagactatgagcagtctgagggtagaaatcatgt--tttatactatatccccagttcttaacccagtgtctgaatacacagtaa-------------atga-----atgtttgttgaaATCAAACAATAATGCCTTGATTTCTATTACTCTAGCCATTTATTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100508823 306 - 115148730 ttcatccttcaaggcttacttcagaaatcccctactccagaaagcctttcctgaccctacttg-ctccc-acatctggtttcggtaccccttatctgtgagcatactttaccttagca----cctaatccatggtacataacggctggagtcactg-ttgtgcataactatgactagactgtgagcagtctgagggtagaaatcatgt--tttatactatatccccagttcttaacccagtatctgaatacacagtaa-------------atga-----at----gttgaaATCAAACAATAATGCCTTGATTTCTACTACTCTAGCCATTTATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80662347 310 + 95678458 ttcatccttcaaggcttacttcagaaatcccctactccagaaagcctttcctgaccctacctg-ttccc-acatctggtttaggtaccccttatctgtgagcatactctaccttagca----cttaatccatggtacataactgttggagttactg-ttctgcataactatgactagaatatgagcagtctgagggtagaaatcatgt--tttctactacatccccagttcttaacccagtatctgaatacacactga-------------atga-----atgtttgttgaaATAAAATAGTAATGCCTTGATTTCTATTACTCTAGCCATTTATTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81088406 310 - 96509753 ttcatccttcaaggcttacttcagaaatcccctactccagaaagcctttcctgaccctacctg-ttccc-acatctggtttaggtaccccttatctgtgagcatactctaccttagca----cttaatccatggtacataactgttggagttactg-ttctgcataactatgactagaatatgagcagtctgagggtagaaatcatgt--tttctactacatccccagttcttaacccagtatctgaatacacactaa-------------atga-----atgtttgttgaaATAAAATAGTAATGCCTTGATTTCTATTACTCTAGCCATTTATTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76345889 310 + 90941950 TTCATCCTTCAAGGCTTACTTCAGAAATCCCCTACTCCAGAAAGCCTTTCCTGACCCCACCTG-TTCCC-ACATCTGGTTTGGGTACCCCTTATCTGTGAGCATACTCTACCTTAGCA----CTTAATCCATGGTACATAACTGTTGGAGTTACTG-TTCTGCATAACTATGACTAGAATATGAGCAGTCTGAGGGTAGAAATCATGT--TTTATACTACATCCCCAGTTCTTAACCCAGTATCTGAATACACACtaa-------------atga-----atgtttgttgaaataaaatagtaatgcCTTGATTTCTATTACTctagccatttattt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18613752 309 + 33263144 ttcatccttcaaggcttacttcagaaatcccctactccagaaagcctttcctgaccctacctg-ttccc-acatctggtttaggtaccccttatctgtgagcatactctaccttagca----cttaatccatggtacataactgttggagttactg-ttctgcataactatgactagaatatgagcagtctgaggggagaaatcatgt--tttatactacatcccc-gttcttaacccagtatctgaatacacactaa-------------atga-----atgtttgttgaaATCAAATAGTAATGCCTTGATTTCTATTACTCTAGCCATTTATTT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198313949 303 + 210400635 tttatccttcaaggcttacttcagaaatcccctattccagaaagcctttcctgaccctacctg-ttcct-gcatctagtttaggtaccccttatctgtgagcacactttaccttagca----cctaatccatggttcgtaactactggaattactg-----gcataactatgactagactatgagcagtct-agggtagaaatcatgt--tttagaccatacccccagttcttaacccag-atctgaatacacagtaa-------------atga-----gtatttgttgaaATCAAACAATAAT-TCTTGATTTTTATTACTCTAGCCATTGATTT i calJac3.chr1 C 0 C 0 s mm10.chr15 77158713 287 + 104043685 TCTATTCTCCAAGGCTTACTTTAGATATCCTC-ACCCCTGAAAA-CTTTCCCAGCCCTATCTGCTTTCC-ATGTCCCAGTTAGTTGCCCTGTTCCTGTGTGCACACTTTACCTTGGCA----TCTGTCTCATGG-ATATAA----------------GTCTGCATGATTCTGATTACACTGTGAGCAGTCTGAGG-----------GT--TTTATATCACA-CCTCAGCTCTTA--TCAATGCTTGGATGAACTGTGGTGGTGGTGGTGGTATGC----TGTGCTTGTTAAACTTAA--AATAATAACGTAATCTGC----CTTTAGCCTTTTTTTT i mm10.chr15 I 1721 C 0 s canFam3.chr10 40937160 308 - 69331447 tttatccttcagagctcacttcagggaccccctgttctag--agtctctcctgaccctacctg-ctcccaacatttggctttggtccccctt---------taccctatgccttagtgcttgcctggcctagagttcataa-agttggggtcactgtttctgcataaatatgacttga-tgagagcaacctgagggtaggaattatgtgcttcataccatatccccagttccgaatgcagtgcctgaatacacagcag-------------atgaaaaaaacattagctgaaATCAAGCTACAATGCCTTGACTTCTA--ACTCTATCCATTTATTT i canFam3.chr10 I 8 I 3 a score=7526.000000 s hg38.chr22_KI270876v1_alt 165381 4 + 263666 ATTC s panTro4.chr22 34543122 4 + 49737984 ATTC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30956730 4 + 46535552 ATTC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100509129 4 - 115148730 ATTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80662657 4 + 95678458 ATTC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81088716 4 - 96509753 ATTC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76346199 4 + 90941950 attc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18614061 4 + 33263144 ATTC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198314252 4 + 210400635 ATTA i calJac3.chr1 C 0 C 0 s mm10.chr15 77159000 4 + 104043685 TGGG i mm10.chr15 C 0 C 0 e canFam3.chr10 40937468 3 - 69331447 I a score=244523.000000 s hg38.chr22_KI270876v1_alt 165385 64 + 263666 ACACATGGATACATC------AGAATGAAGAGCACCTATGTAGTTATCAAAATATTATAAAAGCATTCTT- s panTro4.chr22 34543126 64 + 49737984 ACACATGGATACATC------AGAATGAAGAGCACCTATGTAGTTATCAAAATATTATAAAAGCATTCTT- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30956734 64 + 46535552 ACACATGGATACATC------GGAATGAAGAGCACCTATGTAGTTACCAAAATATTATAAAAGCATTCTT- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100509133 64 - 115148730 ACACATGGATACATC------AGAATGAAGAGCACCTATGTAGTTATCAAAATATTATAAAAGCATTCTT- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80662661 64 + 95678458 ACACATGGATATATC------AAAATGAAGAGCACCTATGTAGTTACCAAAATATTATAAAAGCATTCTT- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81088720 64 - 96509753 ACACATGGATATATC------AAAATGAAGAGCACCTATGTAGTTACCAAAATATTATAAAAGCATTCTT- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76346203 64 + 90941950 acacatGGATATATC------AAAATGAAGAGCACCTATGTagttatcaaaatattataaaagcatTCTT- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18614065 64 + 33263144 ACACATGGATATATC------AAAATGAAGAGCACCTATGTAGTTATCAAAATATTATAAAAGCATTCTT- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198314256 64 + 210400635 ACACATGGATACATC------AGAATGAGGAACACCTATGGAGTTATAAAAATATTATAAAAGCATTATT- i calJac3.chr1 C 0 C 0 s mm10.chr15 77159004 70 + 104043685 GGGGGGGCATACTTCGCAAATAAAATGTAAAGTACCTTGGTAGTTACTGAAGTACTACGAAAGCATTCTT- i mm10.chr15 C 0 I 11 s canFam3.chr10 40937471 64 - 69331447 ATGCATGGGCACCTA------AGAATGAAGAATACCCATGTGGTTATCAAAACATTA-AAAAGTGCTCTTT i canFam3.chr10 I 3 C 0 a score=182264.000000 s hg38.chr22_KI270876v1_alt 165449 57 + 263666 TCTTCCAAGAGCGCACTTGGAGATATCTTCAAATTTATAAATTTACTTCAC-ttt----------------ttt s panTro4.chr22 34543190 57 + 49737984 TCTTCCAAGAGCACACTTGGAGATATCTTCAAATTTATAAATTTACTTCAC-ttt----------------ttt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30956798 58 + 46535552 TCTTCCAAGAGCACACTTGGAGATATCTTCAAATTTATAAATTTACTTCACtttt----------------ttt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100509197 56 - 115148730 TCTTCCAAGAGCGCACTTGGAGATATCTTCAAATTTATAAATTTACTTCAC--tt----------------ttt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80662725 58 + 95678458 TCTTCCAAGAGCGTACTTGGAAATATCTTCAAATTTATACATTTACTTCACtttt----------------ttg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81088784 58 - 96509753 TCTTCCAAGAGCGTACTTGGAAATATCTTCAAATTTATACATTTACTTCACtttt----------------ttg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76346267 58 + 90941950 TCTTCCAAGAGCGTActtggaaatatcttcaaatttatacatttacttcactttt----------------ttg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18614129 58 + 33263144 TCTTCCAAGAGCGTACTTGGAAATATCTTCAAATTTATACATTTACTTCACtttt----------------ttg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198314320 74 + 210400635 TCTTCCAAGAATGTACTTGGAAATATCTTCAAATTTATAAATTTACTTCAGGtttttttgtgttgttgttgttg i calJac3.chr1 C 0 C 0 s canFam3.chr10 40937535 57 - 69331447 TCTTCCAAAAAGATACTTGGAAGTATGTTCAGATTTATAAATTTACCTCAGTATT----------------TT- i canFam3.chr10 C 0 C 0 e mm10.chr15 77159074 11 + 104043685 I a score=854081.000000 s hg38.chr22_KI270876v1_alt 165506 290 + 263666 ttttgaggtggagtctcgctctgttgcccaggctggagtgcagtggcacgatctcagctcactgcaacctccacctcccaggttcaagcgattctcctgtctcagcctcccaagtagctgggattacaggcacacaccaccatgcccggcag-----ttttttttttttttttttgcattt-ttagtagagat-atgtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatccaaccgtcttggcctcccaaagtgctgggattacaggcgtgagccaccgcg s panTro4.chr22 34543247 294 + 49737984 ttttgaggtggagtctcgctctgttgcccaggctggagtgcagtggcacgatctcagctcactgcaacctccacctcccaggttcaagcgattctcctgtctcagcctcccaagtagctgggattacaggcacacaccaccatgcccggcag-ttttttttttttttttttttttgcattt-ttagtagagat-atgtttcaccatgttggccaggctggtcttaaactcctgacctcaggtgatccacccgtcttggcctcccaaagtgctgggattacaggtgtgagccaccgcg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30956856 286 + 46535552 ttttgaggtggagtctcgctctgttgcccaggctggagtgcagtggcacgatctcagctcactgcaatctccacctcccaggttcaagcgattctcctgtctcagcctcccaagtagctgggattacaggcacacaccaccatgcccggcag---------ttttttttttttttgcattt-ttagtagagat-atgtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatccacccatcttggcctcccaaagtgctgggattacaggcgtgagccaccgcg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100509253 295 - 115148730 ttttgagatggtgtctcgctctgttgcccaggctggagtgcagtggcatgatctcagctcactgcaacctccacctccccggttcaagcaattctcctgtctcagcctcccaagtagctgggattataggcacacaccaccatgcccagcagtttttttttgtttttttttttttgcattt-ttagtagagat-atgtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatccacccgtcttggcctcccaaagtgctgggattacaggcgtgagccaccgcg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80662783 294 + 95678458 ttttgagacagagtctcgctctgttgcccaggctggagtgccgtggcacaatctcagttcactgcaacctccacctcccaggttcaagtgattctcctgtctcagcctcccaagtagctgggattacaggcacacaccaccatgcccagcag-ttttttgttttttg-tttttttgcattt-ttaatagaaatgatgtttcaccatgttggccaggctggtcttgaagtcctgacctcaggtgatctacccgtcttggcctcccaaagtgctgggattacaggtgtgagccaccacg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81088842 294 - 96509753 ttttgagacagagtctcgctctgttgcccaggctggagtgccgtggcacaatctcagttcactgcaacctccacctcccaggttcaagtgattctcctgtctcagcctcccaagtagctgggattacaggcacacaccaccatgcccagcag-ttttttgttttttg-tttttttgcattt-ttaatagaaatgatgtttcaccatgttggccaggctggtcttgaagtcctgacctcaggtgatctacccgtcttggcctcccaaagtgctgggattacaggtgtgagccaccacg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76346325 295 + 90941950 ttttgagacagagtctcgctctgttgcccaggctggagtgccgtggcacaatctcagttcactgcaacctccacctcccaggttcaagtgattctcctgtctcagcctcccaagtagctgggattacaggcacacaccaccatgcccagcag-ttttttgttttttgttttttttgcattt-tcagtagaaatgatgtttcaccatgttggccaggctggtcttgaagtcctgacctcaggtgatctacccgtcttggcctcccaaagtgctgggattacaggtgtgagccaccacg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18614187 295 + 33263144 ttttgagacagagtctcgctctgttgcccaggctggagtgcagtggcacaatctcagttcactgcaacctccatctcccaggttcaagtgattctcctgtctcagcctcccaagtagctgggattacaggcacacaccaccatgcccagcag-ttttttgttttttggtttttttgcattt-ttagtagaaatgatgtttcaccatgttggccaggctggtcttgaagtcctgacctcaggtgatctacccgtcttggcctcccaaagtgctgggattacaggtttgagccaccatg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198314394 279 + 210400635 ttttgagaaggaatctcactctgttgcccaggcagcagtacagtggtgcgaccttggctcactgcaacctccacctcccaggttcaagcgattctcctgtctcagcctcccaaatagctgggagga-aggcacacaccaccatgcccggcga-----------------tttttcatatttattagtagacacagggtttcaccatgttggccaggctggtctcaaacgcctgacctcaggtgatccaccttcctcggcctcccaaagtgctgggagtacaggtgtaagccaccacg i calJac3.chr1 C 0 C 0 e mm10.chr15 77159074 11 + 104043685 I e canFam3.chr10 40937592 0 - 69331447 C a score=31919.000000 s hg38.chr22_KI270876v1_alt 165796 10 + 263666 cctggccTTA s panTro4.chr22 34543541 10 + 49737984 cctggccTTA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30957142 10 + 46535552 cctggccTTA i ponAbe2.chr22 C 0 I 590 s nomLeu3.chr7b 100509548 6 - 115148730 cctggc---- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80663077 10 + 95678458 cctggccTTA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81089136 10 - 96509753 cctggccTTA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76346620 10 + 90941950 cctggcctta i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18614482 10 + 33263144 cctggccTTA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198314673 10 + 210400635 cctggccTTA i calJac3.chr1 C 0 C 0 s mm10.chr15 77159085 10 + 104043685 CCTGGCAATA i mm10.chr15 I 11 C 0 e canFam3.chr10 40937592 0 - 69331447 C a score=73406.000000 s hg38.chr22_KI270876v1_alt 165806 26 + 263666 -CTTCAGTTTTAT-------TTTCAGTATCTTTC s panTro4.chr22 34543551 26 + 49737984 -CTTCAGTTTTAT-------TTTCAGTATCTTTC i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100509554 26 - 115148730 -cTTCAGTTTTAT-------TTTCAGTATCTTTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80663087 26 + 95678458 -CTTCAGTTTTAT-------CTTCAGTATCTTTC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81089146 26 - 96509753 -CTTCAGTTTTAT-------CTTCAGTATCTTTC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76346630 26 + 90941950 -ctTCAGTTTTAT-------CTTCAGTATCTTTC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18614492 26 + 33263144 -CTTCAGTTTTAT-------CTTCAGTATCTTTC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198314683 26 + 210400635 -CTTCAGTTTTAT-------CTTCAGTATCTTTC i calJac3.chr1 C 0 C 0 s mm10.chr15 77159095 34 + 104043685 TTTTCAAATTTATAAGTTTATTTCAATAACTTTC i mm10.chr15 C 0 C 0 e canFam3.chr10 40937592 0 - 69331447 C e ponAbe2.chr22 30957152 590 + 46535552 I a score=958563.000000 s hg38.chr22_KI270876v1_alt 165832 305 + 263666 AGAAATCTGAAGCTGAAAGGAAGATGTACAAAA--AGAGTGGGAGAAAGGCTTTATTTTCAATTTTATTAGAATAGTTCAGATTCTAGACAAAATAATACCCACTCA-TTTAAAAAAAAT----------TTTTTTTAGGTGTTCTTG------------TCATA-CAGAAGTAACTCAGCTTCCCTACCTTCCACCCACATACCAGCACTGCTATAAAAGTGGATCTAAGAGTCCCTGTCTACAAGGCAGGGCTTGCTCCAACTTTCCCAGGCTGCCTCTGACACCCAAGTGAAAGGCAACATTAAAGGGAGAGCATTTCCTGCAATAAT s panTro4.chr22 34543577 305 + 49737984 AGAAATCTGAAGCTGAAAGGAAGATGTACAAAA--AGAGTGGGAGAAAGGCTTTATTTACAATTTTATTAGAATAGTTCAGATTCTAGACAAAATAATACCCACTCa-ttaaaaaaaaat----------tttttttaGGTGTTCTTG------------TCATA-CAGAAGTGACTCAGCTTCCCTACCTTCCACCCACATACCAGCACTGCTATAAAAGTGGATCTAAGAGTCTCTGTCTACAAGGCAGGGCTTGCTCCAACTTTCCCAGGCTGCCTCTGACACCCAAGTGAAAGGCAACATTAAAGGGAGAGCATTTCCTGCAATAAT i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100509580 304 - 115148730 AGAAATCTGAAGCTGAAAGGAAGATGTACAAAA--AGAGTGGGAGAAAGGCTTTATTTTCAATTTTATTAGAATAGTTCAGATTCTAGACAAAATAATACCCACTCA-TTTAAAAAGAA-----------TTTTTTTAGGTGTTCTTG------------TCATA-CAGAAGTGACTCAACTTCCCTACCTTCCACCCACATACTAGCACTGCTATAAAAGCAGATCTAAGAGTCCCTGTCTACAAGGCAGGGCTTGCTCCAACTTTCCCAGGCTGCCTCTGACACCCAAGTGAAAGGCAACATTAAAGGGAGAGCATTTCCTGCAATAAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80663113 307 + 95678458 AGAAATCTGAAGCTGAAAGGAAGATGCACAAAA--AGAGTGGGAGAAAGGCTTTATTTTCAATTTTATTAGGTTAGTTCAGATTCTAGACAAAATAATACCCACTCA-TTAAAAAAAAAA--------AACAACTTTAGTTGTTCTTG------------TCATA-CAGAAGTGACTCAACTTCCCTACCTTCCACCCACATACCAGTACTGCTATAAAAGCAGATCTAAGAGTCCCTGTCTAGAAGGCAGGGCTTGCTCCAACTTTCCCAGGCTGCCTCTGACACCCAAGTGAAAGGCAACATTAAAGGGAGAGCATTTCCTGCAATAAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81089172 304 - 96509753 AGAAATCTGAAGCTGAAAGGAAGATGCACAAAA--AGAGTGGGAGAAAGGCTTTATTTTCAATTTTATTAGGTTAGTTCAGATTCTAGACAAAATAATACCCACTCA-TTAAAAAAAAAA-----------AACTTTAGTTGTTCTTG------------TCATA-CAGAAGTGACTCAACTTCCCTACCTTCCACCCACATACCAGTACTGCTATAAAAGCAGATCTAAGAGTCCCTGTCTAGAAGGCAGGGCTTGCTCCAACTTTCCCAGGCTGCCTCTGACACCCAAGTGAAAGGCAACATTAAAGGGAGAGCATTTCCTGCAATAAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76346656 308 + 90941950 AGAAATCTGAAGCTGAAAGGAAGATGCACAAAA--AGAGTGGGAGAAAggctttattttcaattttattaggtTAGTTCAGATTCTAGACAAAATAATactcactcatttaaaaaaaaaa--------aacaactttaggtGTTCTTG------------TCATA-CAGAAGTGACTCAACTTCCCTACCTTCCACCCACATACCAGTACTGCTATAAAAGCAGATCTAAGAGTCCCTGTCTAGAAGGCAGGGCTTGCTCCAACTTTCCCAGGCTGCCTCTGACACCCAAGTGAAAGGCAACATTAAAGGGAGAGCATTTCCTGCAATAAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18614518 307 + 33263144 AGAAATCTGAAGCTGAAAGGAAGATGCACAAAA--AGAGTGGGAGAAAGGCTTTATTTTCAATTTTATTAGATTAGTTCAGATTCTAGACAAAATAATACCCACTCA-TTTAAAAAAAAA--------AAAAACTTTAGGTGTTCTTG------------TCATA-CAGAAGTGACTCAACTTCCCTACCTTCCACCCACATACCAGTACTGCTATAAAAGCAGATCTAAGAGTCCCTGTCTAGAAGGCAGGGCTTGCTCCAACTTTCCCAGGCTGCCTCTGACACCCAAGTGAAAGGCAACATTAAAGGGAGAGCATTTCCTGCAATAAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198314709 321 + 210400635 AGAAATCTGAAGCTGAAAGGAAGATGTATAAAA--AGAGTGGGAGAAAGCCTTCATTTTCAATTTTA-----ATAGTTCAGATTCTAGACAAAGTAATACCCACTCA-TTAAAAAAAAAAAAAACAAAAAAAACTTTAGGTTTTCTTGCTCTTCACAATTTTATA-TAGAAGTGACTCGACTTCCCTACCGTCCACCCACATACCAGCACTGCTATAAAAACAGATCCAAGAGTCCCTGTCTAGAAGGCAGGGCTTGCTCCAACTTTCCCAGGCTTCCTCTGACACCCAAGTGAAAGGC-ACATTAAAGGGAGAGCATTTCCTGCAGTAAT i calJac3.chr1 C 0 C 0 s mm10.chr15 77159129 292 + 104043685 AGAACACTGAACTGAAGAGTTAGGCAAAAAGAT--AAGGTGAGATAAAGATT---TTTTAACCTTTGTTAGAGTACCTGAGATTGTAGATAG---AATACCTGCTAA-CTAAAAACCCAC----CTCACACACTTTTGCTTTTTATAA------------TTTTA-TGGTTGTGACTCAACTTCCCTACCTTCAACCCATATACCATTTATGCTATAAAGGTGGATCC-AGAGTCCCTGACTAGAA-GCAGGGCTCTCTCATACTTTCCCAGGCTGTTTT-----------TGAAGAGCAGCATTAAAGAGCGAGTACTTCCTCTAACAAT i mm10.chr15 C 0 C 0 s canFam3.chr10 40937592 330 - 69331447 AGAAATCTGAGGCTGAAAGGGAGATGTACAAAAAGAGAGTGGGAGAAAGGCCTTATTGTCAACTTGATTAGAATAGTTCAGATTCTAGACAAAATAATACTCACTGA-TTTTTCAAAACACACACACACACAACTTTAGGTGCCCCTGCTCTTCACAATTTTACATTAGATGTGACTCAACTTCCGTACCTTCCACCCACATACCAGTAATGCTATAAAAGCAGATCCAACAGTCCCTGGCTGGAAGGCAGGTTTTGCTCATACTTTCCCAGGCTGCCTCTGACACCCAAGTGAAAAGCAACATTAAAGGGATAGCATTTCCTGCAATAAT i canFam3.chr10 C 0 C 0 e ponAbe2.chr22 30957152 590 + 46535552 I a score=1528343.000000 s hg38.chr22_KI270876v1_alt 166137 442 + 263666 AAAAACTTGTTGGTATAAAGGCTCTTCACGG----CACGCCCCCACACAATAACCCTAACTAAGTGTAAATAACAATTTACACCTAACAGATATTAAATACCTTTCCAGAAGCACCTCTAATACAATACCACTTTAATATCCTTTGCCCCAACATTCCCCTTAACATAAATGAAGTCAAATTACAGCTAACTCTATTATTTCCCTAACTTTATTTCTCTAGTTTAGGCAGAGTTCAGTCATATAGAACCCATTCACCATTC-------AAAA-AAAAAAAAAAGTGAGTGTGAAATTTGAAATCAAATGCTTTAGATCTTATAGGCTTAT-A---AA----AAACAATCCT--CATTTATTTCCTGTT-CCCCAAAGTCAAACCTT-TAGCACAAAACCACAAATAACATAAACTAAGACATCAGTGAGGCCAGGCAAATCAAAAAAT-TTAATTCACAAATTACTA s panTro4.chr22 34543882 444 + 49737984 AAAAACTTGTTGGTATAAAGGCTCTTCACGGC--ACACGCCCCCACACAATAACCCTAACTAAGTGTAAATAACAATTTACACCTAACAGATATTAAATACCTTTCCAGAAGCACCTCTAATACAATACCACTTTAATATCCTTTGCCCCAACATTCCCCTTAACATAAATGAAGTCAAATTACAGCTAACTCTATTATTTCCCTAACTTTATTTCTCTAGTTTAGGCAGAGTTCAGTCATATAGAAGCCATTCACCATTC-------AAAA-AAAAAAAAAAGTGAGTGTGAAATTTGAAATCAAATGCTTTAGATCTTATAGGCTTAT-A---AA----AAACAATCCT--CATTTATTTCCTGTT-CCCCAAAGTCAAACCTT-TAGCACAAAACCACAAATAACATAAACTAAGACATCAGTGAGGCCAGGCAAATCAAAAAAT-TTAATTCACAAATTACTA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30957742 435 + 46535552 AAAAACTTGTTGGTATAAAGGCTCTTCACAGCCAGCACGCCCCCACACAATAACCCTAACTAAGTGTAAATAACAATTTACACCTAACAGATATTAAATACCTTTCCAGAAGCACCTCTAATACAATACCACTTTAATATCCTTTGACCCAACATTCCCCTTAACATAAATGAAGTCAAATTACAGCTAACTCTATTATTTCCCTAACTTTATTTCTCTAGTTTAGGCAGAGTTCAGT--TATAGAACCCATTCACCATTC--------AAA-AAAAAATAAAGTGAGTGTGAAATTTGAAATCAAATG--------CTTATAGGCTTAT-A---AA----AAACAATCCT--CATTTATTTCCTGTC-CCCCAAAGTCAAACCTT-TAGCACAAAACCACAAATAACATAAACTAAGACATCAGTGAGGCCAGGCAAATCAAAAAAT-TTAATTCACAAATTACTA i ponAbe2.chr22 I 590 C 0 s nomLeu3.chr7b 100509884 445 - 115148730 AAAAACTTGTTAGTATAAAAGCTCTTCACAG----CACGCCCCCACAAAATAACC----CTAAGTGTAAATAACAATTTACACCTAACAGATATTAAATACCTTTCCAGAAGCACCTCTAATACAATACCACTTTAATATCCTTTGCCCCAACATTCCCCTTAACATAAATGAAGTCAAATCACAGCTAACTCTATTATTTCCCTAACTTTATTTCTCTAGTTTAGGCAGAGTTCAGTTATATAGAACCCATTCACCATGCaaaaaaaaaaa-aaaaaaaaaaGTGAGCGTGAAATTTGAAATCAAATGCTTTAGATCTTATAGGCTTAT-A---AA----AAACAATCCT--CATTTATTTCCTGTC-CCCCAAAGTCAAACCTT-TAGCACAAAACCACAAATAACATAAACTAAGACATCAGTGAGGCCAGGCAAATCAAAACAT-TTAATTCACAAATTACTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80663420 430 + 95678458 AAAAACTTGTTGGTATAAAGGCTCTTCACAG----CACGCCCCCAAACAATAACC----CTAAGTGTAAATAACAATTTACACCTAACAGATATTAAATACCTTTCCAGAAGCACCTCTAATACAATACCACTTTAATATCCTTTGCCCCAACATTCCCCTTAACATAAATGAAGTCGAATTACAGCTAACTCTATTATTTCCCTAACTTTATTTCTC-----TAGGCAGAGTTCAGTTATATAGAACCCATTCACCATTC----------C-AAAAAAAAAAGTGAGCATGAAATTTGAAATCAACTGCCTAACATCTTACAGGCTTAT-A---AA----AAACAATTCT--CATTTATTTCCTGTC-CCCCAAAGTCAAACCTT-TAGCACAAAACCACAAATAACATAAACTAAGACATCCGTGAGGCCAGGCAAATCAAAAAAT-TTAATTCACAAATTACTA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81089476 434 - 96509753 AAAAACTTGTTGGTATAAAGGCTCTTCACAG----CACGCCCCCAAACAATAACCCTAACTAAGTGTAAATAACAATTTACACCTAACAGATATTAAATACCTTTCCAGAAGCACCTCTAATACAATACCACTTTAATATCCTTTGCCCCAACATTCCCCTTAACATAAATGAAGTCGAATTACAGCTAACTCTATTATTTCCCTAACTTTATTTCTC-----TAGGCAGAGTTCAGTTATATAGAACCCATTCACCATTC----------C-AAAAAAAAAAGTGAGCATGAAATTTGAAATCAACTGCTTTACATCTTACAGGCTTAT-A---AA----AAACAATTCT--CATTTATTTCCTGTC-CCCCAAAGTCAAACCTT-TAGCACAAAACCACAAATAACATAAACTAAGACATCCGTGAGGCCAGGCAAATCAAAAAAT-TTAATTCACAAATTACTA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76346964 436 + 90941950 AAAAACTTGTTGGTATAAAGGCTCTTCACAG----CATGCCCCCAAACAATAACCCTAACTAAGTGTAAATAACAATTTACACCTAACAGATATTAAATACCTTTCCAGAAGCACCTCTAATACAACACCACTTTAATATCCTTTGCCCCAACATTCCCCTTAACATAAATGAAGTCAAATTACAGCTAACTCTATTATTTTCCTAACTTTATTTCTC-----TAGGCCGAGTTCAGTTATATAGAACCCATTcaccattc----------caaaaaaaaaaagtgagcatgaAATTTGAAATCAACTGCTTTACATCTTACAGGCTTATaa---aa----aaaCAATTCT--CATTTATTTCCTGTC-CCCCAAAGTCAAACCTT-TAGCACAAAACCACAAATAACATAAACTAAGACATCCGTGAGGCCAGGcaaatcaaaaaat-ttaattcaCAAATTACTA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18614825 434 + 33263144 AAAAACTTGTTGGTATAAAGGCTCTTCACAG----CACGCCCCCAAACAATAACCCTAACTAAGTGTAAATAACAATTTACACCTAACAGATATTAAATACCTTTCCAGAAGCACCTCTAATACAATACCACTTTAATATCCTTTGCCCCAACATTCCCCTTAACATAAATGAAGTGAAATTACAGCTAACTCTATTATTTCCCTAACTTTATTTCTC-----TAGGCAGAGTTCAGTTATACAGAACCCATTCACCATTC----------C-AAAAAAAAAAGTGAGCATGAAATTTGAAATCAACTGCTTTACATCTTACAGGCTTAT-A---AA----AAACAATTCT--CATTTATTTCCGGTC-CCCCAAAGTCAAACCTT-TAGCACAAAACCACAAATAACATAAACTAAGACATCCGTGAGGCCAGGCAAATCAAAAAAT-TTAATTCACAAATTACTA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198315030 443 + 210400635 AAAAACTTGTTGGTATAAAGGCTCTTCACAG----CATGCCCCCACACAATAACCCTAACCAAGTATAAATAACAATTTACACCTAACAGATATTAAATACCTTCCCAGAAACACCTCTAACATAATACCACTCTAATATCCTTTGCCCCAACATCCCCCTTGACATAAATGAAGTCAAATTATAGCCAA--CTATTATTTCCCTAACTTTATTTCTCTAGTTTAGGCAGAGTTCAGTTATATAGAACTCATTCaaaaaaa-----aaaaaa-aaaaaaaGAGGAGAGGGTGTAATTTGAAATCAACTGCTTAAGCTCTTATAGGCTTAT-T---AA----AAACAATCCT--CATTTATTTCCTGTCACCCCAAAGTCAAATATT-TAGCACAAAACCACAAATAACATAAACTAAGACATCAGTAAGGTCTAGCAAATCAGAAAAT-TTAATTCACAAATTACTA i calJac3.chr1 C 0 C 0 s mm10.chr15 77159421 303 + 104043685 GAAACCTCGGCCATACAAAAGC-CTTCACAG----CACACCCCT--GCAATAACT----CTCAGTGT------CAATTTACTCCTA----ATACTGGCTACCTTTCCATAAGC-----------------------------------------TTCCCCTCCCC---------------------------------TCCCCCGTACT-----------------GCAGGGTACAATT-CAGACAGCCCATTT-----------------C-AGAATAAAGGGTGAGAGTAGGATCTGAA---AACGGTTTTAAACCTTGTACATTTAT-ATACAT----ACAAAATCCTCACACTTATTTCTTGTA--------------CCTT-TAG-----AAAGATGAA-AACACGTACTAACATCATGGTAAGGC----CAAATTAAAACATATTACTTCATTAGCTATAA i mm10.chr15 C 0 C 0 s canFam3.chr10 40937922 441 - 69331447 AAAAACTTGTTAGTATAAAAGCTTTTCACAG----CACGCCCCCACACAATAACC----CTAAGTGTAAATAACAATTTACACCTAATAGATATTAAATACCTTCCCAGAAGCATCTCTGACACAATGCCACTTTAATATCCTTTGCCTTCACATTCCCTTTAGTATAAGTGAAGCCAAATTAAGGCTAACTCTATTATTTCCTT-GCTTCTTTTCTCTAGTTTAGGCAGGGTTCAGTTATACAGAACCCATTCTTGAAAA----------A-AAAAAAAAAAGTGAGAGCTGCATTTTAAATGGACTGCTTTAGACCTTCTATGC-TAT-A---AAACCTAAATAACCCTTACATTTATCTCTTGTC-CCTGAAAACTAAACCTTGTAGAACAAGACCCCAAATAACATACTCTAAGACACAGGTGAGCCCAGAGAAATTAGAAAACATTACTTCATAAATTAATA i canFam3.chr10 C 0 I 139 a score=1274928.000000 s hg38.chr22_KI270876v1_alt 166579 396 + 263666 CATGTCTTTGGGTAACTT-ATTCATATCTTTAAGAAATCCCAAACCCCAGATAACTAGAGTCATACATACAACTGAAATTATGTGTACATTGTACACATCCCTGTGAGGGATTAAGGAAAAGGTTCTCAGACAAATATGAAAATGGATGGGATGT-AAACAAATTTATCAATAACTGGGTTGTCAAGAAGATAATACATGATTAATCTGTGAAAATTGAAGACTGCTCTTTATCCAACGGCATGCCACGAATATGCCATGCCTCTATTATTAAGTTAcaggaaactttgttgtcttgttcaccactaatatccctgtgtctggcatagtatctggcacacagtaggtactcaaaaaacagttgGTACACAATAAACTAATTCAGAATGAGAAAATAAA s panTro4.chr22 34544326 396 + 49737984 CATGTCTTTGGGTAACTT-ATTCATATCTTTAAGAAATCCCAAATCCCAGATAACTAGAGTCATACATACAACTGAAATTATGTGTACATTGTACACATCCCTGTGAGGGATTAAGGAAAAGGTTCTCAGACAAATATGAAAATGGATGGGATGT-AAACAAATTTATCAATAACTGGGTTGTCAAGAAGATAATACATGATTAATCTGTGAAAACTGAAGACTGCTCTTTATCCAACGGCATGCCACGCATATGCCATGCCTCTATTATTAAGTTAcaggaaactttgttgtcttgttcaccactaatatccctgtgtctagcatagtatctggcacacagtaggtactcaaaaaacagttgGTACACAATAAACTAATTCAGAATGAGAAAATAAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30958177 396 + 46535552 CATGTCTTTGGGTAACTT-ATTCACATCTTTAAGAAATCCCAGACCCCAGATAACTACAGTCATACATACAACTGAAATTATGTGTACATTGTACACATCCCTGTGAGGGATTAAGGAAAAGGTTCTCAGATAAATATGAAAATGGATGGGACGT-AAACAAATTTATCAATAACTGGGTTGTCAAGAAGATAATACATGATTAATCTGTGAAAATTGAAGAGTGCTGTTTATCCAACGGCATGCCACGAATATGCCATGCCTCTATTATTAAGTTAcaggaaacgttgttgtcttgttcaccacgaatatccctatgtttggcatagtatctggcacacagtaggtactcaaaaaacagttgGTACACAATAAACTAATTCAGAATGAGAAAATAAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100510329 397 - 115148730 TATGTCTTTGGGTAACTTAATTCATATCTTTAAGAAATCCCAAACCCCAGATAACCAGAGTCATACATACAACTGAAATTATGTGTACATTGTACACATCCCTGTGAGGGATTAAGGAAAAGGTTCTCAGACAAATATGAAAATGGATGGGACGT-AAACAAATTTATCAATAACTGGGTTGTCAAGAAGATAATACATGAATAATCTGTGAAAACTGAAGAGTGCTGTTTATCCAACGGCATGCTACAAATACGCCATGCCTCTATTATTAAGTTAcaggaaactttgttgtcttgttcaccactaatatccctgtgtctggcatagtatctggcacacagtaggtacttaaaaaacagttgGTACACAATAAACTAATTCAGAATAAGAAAATAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80663850 392 + 95678458 TATGTATTTGCGTAACTT-ATTCATATCGTTAAGAAATCCCAAACCCCAGATAACTAGAGTCATACAAACAACTGAAAGTATGTGTACACTGTACACATCCCTGTGAGAGATTAAGGAAAAGGTTCTT----AAATATGAAAACGGATGGGACGT-AAACAAATTTATCAATAACTGGGTTGTCAAGAAGTTAATTCATGATTAATCTGTGAAAACTGAAGAGTGCTGTTTATCCAACAACATGCCATGAATATGCCATGCCTCTATTACTTAGTTAcaggaaactctgttgtcttgttcaccactaatgtccctgtgcctggcatagtatctggcacacagtaggtactcaaaaaacaGCTGGTACACAATAAACTAATTCAGAATGAGaaaataaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81089910 392 - 96509753 TATGTATTTGCGTAACTT-ATTCATATCGTTAAGAAATCCCAAACCCCAGATAACTAGAGTCATACAAACAACTGAAAGTATGTGTACACTGTACACATCCCTGTGAGAGATTAAGGAAAAGGTTCTT----AAATACGAAAACGGATGGGACGT-AAACAAATTTATCAATAACTGGGTTGTCAAGAAGTTAATTCATGATTAATCTGTGAAAACTGAAGAGTGCTGTTTATCCAACAACATGCCATGAATATGCCATGCCTCTATTACTTAGTTAcaggaaactctgttgtcttgttcaccactaatgtccctgtgcctggcatagtatctggcacacagtaggtactcaaaaaacaGCTGGTACACAATAAACTAATTCAGAATGAGAAAATAAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76347400 396 + 90941950 TATGTATTTGCGTAACTT-ATTCATATCGTTAAGAAATCCCAAACCCCAGATAACTAGAGTCATACAAACAACTGAAAGTATGTGTACACTGTACACATCCCTGTGAGAGATTAAGGAAAAGGTTCTTAAACAAATACGAAAACGGATGGGACGT-AAACAAATTTATCAATAACTGGGTTGTCAAGAAGTTAATTCATGATTAATCTGTGAAAACTGAAGAGTACTGTTTATCCAACAACATGCCATGAATATGCCATGCCTCTATTACTTAGTTACAGGAAACTCTGTTGTCTTGTTCACCACTAATGTCCCTGTGCCTGGCAtagtatctggcacacagtaggtactcaaaaaaCAGCTGGTACACAATAAACTAattcagaatgagaaaataaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18615259 396 + 33263144 TATGTATTTGCGTAACTT-ATTCATATCGTTAAGAAATCCCAAACCCCAGATAACTAGAGTCATACAAACAACTGAAAGTATGTGTACACTGTACACATCCCTGTGAGAGATTAAGGAAACGGTTCTTAAACAAATACGAGAACGGATGGGACGT-AAACAAATTTATCAATAACTGGGTTGTCAAGAAGTTAATTCATGATTAATCTGTGAAAACTGAAGAGTGCTGTTTATCCAACAACATGCCATGAATATGCCATGCCTCTATTACTTAGTTATaggaaactctgttgtcttgttcaccactaatgtccctgtgcctggcatagtatctggcacacagtaggtactcaaaaaacaGCTGGTACACAATAAACTAATTCATAATGAGAAAATAAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198315473 392 + 210400635 TCTGTCTTTGGGTAACTT-ATTCATATCTTTAAGAAATCCCAAACCCCAGATAATTAGGGTCATACGTACAACTGAAATTATGTGTACACTGTA-----TTCTATGAGAGATTAAGGAAAAGGTTCTCAGACAAATATGAAAATGAATGGGATGTAAAACAAATTTATCAATAACTGGGTTTTCAAGAAGATAATACATGATTAATCTGTGAAAACCAAAGAGTGCTGTTTCTCCAACAATATACCATAAATATGCCATGTCTCTATTATTAAATTAcagcaaattttgctatcttgttcaccactaatatccctgtgcctggcataatacctggcacacagtaggtactcaaaaaaaagttgGTACACAGTAAACTAATTCAGAATGAGAAAATAAA i calJac3.chr1 C 0 C 0 s mm10.chr15 77159724 359 + 104043685 TTTTGGATTAGGTAACTT-ATTCATACCATGTAATATTTC--AACCTAAAACAAACTGAGTCATTTATATAACTGATATGATGTCTACTATCTTGGTATTC---TGAGAAAT-----------TTCTCAGATCAATACTAAAAGGGATGCAATGT-AAACAAATGTGTCAATCACTAAATTATCAAGAA---AATACACGATTAAAT--TGAAAATCAAAATGTATGCTTTTTCTAATACTA------AAATATGCCCTGGATCTATTACCAAATTATTagagactatgctagcttggttgtcactgtttctcccgt--ctggcaaagtacttggcacatggtaggtgctttaaaaac--------ttCAGTAAACTAATTCAGATTGAGAAATTAAA i mm10.chr15 C 0 I 129 e canFam3.chr10 40938363 139 - 69331447 I a score=55739.000000 s hg38.chr22_KI270876v1_alt 166975 18 + 263666 TTCAATTTATATAAATTA s panTro4.chr22 34544722 18 + 49737984 TTCAATTTatataaatta i panTro4.chr22 C 0 I 132 s ponAbe2.chr22 30958573 18 + 46535552 TTCAATTTATATAAATTa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100510726 18 - 115148730 TTCAATTTATATAAATTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80664242 18 + 95678458 ttcaatttatataaatta i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81090302 18 - 96509753 TTCAATTTATATAAATTA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76347796 18 + 90941950 tttaacttatataaatta i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18615655 18 + 33263144 TTCAATTTATATAAATTA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198315865 18 + 210400635 TTCAAGTTATATAAATTA i calJac3.chr1 C 0 C 0 e mm10.chr15 77160083 129 + 104043685 I e canFam3.chr10 40938363 139 - 69331447 I a score=6552.000000 s hg38.chr22_KI270876v1_alt 166993 2 + 263666 TA s panTro4.chr22 34544872 2 + 49737984 ta i panTro4.chr22 I 132 C 0 s ponAbe2.chr22 30958591 2 + 46535552 ta i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100510744 2 - 115148730 TA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80664260 2 + 95678458 ta i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81090320 2 - 96509753 TA i macFas5.chr10 C 0 I 4 s papAnu2.chr10 76347814 2 + 90941950 ta i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18615673 2 + 33263144 TA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198315883 2 + 210400635 TA i calJac3.chr1 C 0 C 0 e mm10.chr15 77160083 129 + 104043685 I e canFam3.chr10 40938363 139 - 69331447 I a score=10192.000000 s hg38.chr22_KI270876v1_alt 166995 4 + 263666 TAAA s panTro4.chr22 34544874 4 + 49737984 taaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30958593 4 + 46535552 taaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100510746 4 - 115148730 TAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80664262 4 + 95678458 taaa i rheMac3.chr10 C 0 C 0 s papAnu2.chr10 76347816 4 + 90941950 taaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18615675 4 + 33263144 TAAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198315885 4 + 210400635 TAAA i calJac3.chr1 C 0 C 0 e mm10.chr15 77160083 129 + 104043685 I e canFam3.chr10 40938363 139 - 69331447 I e macFas5.chr10 81090322 4 - 96509753 I a score=76192.000000 s hg38.chr22_KI270876v1_alt 166999 37 + 263666 CTTGC--ATGTTAATATAATTATATAAACTATATAAGTA s panTro4.chr22 34544878 37 + 49737984 cttgc--atgttaatataattacataaactatataagta i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30958597 39 + 46535552 cttgcatatgttaatataattacataaactatataagta i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100510750 34 - 115148730 CTTGCATATGT-----TAATTACATAAACTGTGTAAGTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80664266 39 + 95678458 CTTGCATATGTTAATAAAATTACATAAACTATGTAAGTA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81090326 39 - 96509753 CTTGCATATGTTAATAAAATTACATAAACTATGTAAGTA i macFas5.chr10 I 4 C 0 s chlSab2.chr19 18615679 39 + 33263144 CTTGCATATGTTAATAAAATTACATAAACTATGTAAGTA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198315889 37 + 210400635 CTTGC--ATGTTAATATAATTACACAAACTATATAAGTA i calJac3.chr1 C 0 C 0 e mm10.chr15 77160083 129 + 104043685 I e canFam3.chr10 40938363 139 - 69331447 I e papAnu2.chr10 76347820 0 + 90941950 C a score=9604.000000 s hg38.chr22_KI270876v1_alt 167036 5 + 263666 TAAAC s panTro4.chr22 34544915 5 + 49737984 taaac i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30958636 5 + 46535552 taaac i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100510784 5 - 115148730 TAAAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80664305 5 + 95678458 TAAAC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81090365 5 - 96509753 TAAAC i macFas5.chr10 C 0 T 48 s papAnu2.chr10 76347820 1 + 90941950 ----c i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18615718 5 + 33263144 TAAAC i chlSab2.chr19 C 0 C 0 e mm10.chr15 77160083 129 + 104043685 I e canFam3.chr10 40938363 139 - 69331447 I e calJac3.chr1 198315926 0 + 210400635 C a score=9958.000000 s hg38.chr22_KI270876v1_alt 167041 6 + 263666 TATACT s panTro4.chr22 34544920 6 + 49737984 tatact i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30958641 6 + 46535552 tatact i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100510789 6 - 115148730 TATACT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80664310 6 + 95678458 tatact i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81090322 6 - 96509753 TAAACT i macFas5.chr10 T 48 C 0 s papAnu2.chr10 76347821 1 + 90941950 -----t i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18615723 6 + 33263144 TATACT i chlSab2.chr19 C 0 C 0 e mm10.chr15 77160083 129 + 104043685 I e canFam3.chr10 40938363 139 - 69331447 I e calJac3.chr1 198315926 0 + 210400635 C a score=20032.000000 s hg38.chr22_KI270876v1_alt 167047 17 + 263666 TGCATATGTTAATATAA s panTro4.chr22 34544926 17 + 49737984 tgcatatgttaatataa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30958647 17 + 46535552 tgcatatgttaatataa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100510795 17 - 115148730 TGCATATGTTAATATAA i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81090328 17 - 96509753 TGCATATGTTAATAAAA i macFas5.chr10 C 0 I 48 s papAnu2.chr10 76347822 10 + 90941950 tgcat-tttta------ i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18615729 17 + 33263144 TGTATATGTTAATATAA i chlSab2.chr19 C 0 C 0 e mm10.chr15 77160083 129 + 104043685 I e canFam3.chr10 40938363 139 - 69331447 I e calJac3.chr1 198315926 0 + 210400635 C e rheMac3.chr10 80664316 0 + 95678458 C a score=25183.000000 s hg38.chr22_KI270876v1_alt 167064 41 + 263666 TTACATACACTATATAAGTATAAACTTGCAT--GTTAATATAA s panTro4.chr22 34544943 43 + 49737984 ttacatacactatataagtataaacttgcatatgttaatataa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30958664 41 + 46535552 ttacatacactatataagtataaacttgcat--gttaatataa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100510812 43 - 115148730 TTATATAAACTATATAAGTATAAACTTGCATATGTTAATATAA i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81090393 37 - 96509753 TTACATAAACTATATAAGTATAAACTTGCATATGTTA------ i macFas5.chr10 I 48 T 85 s papAnu2.chr10 76347832 14 + 90941950 ---------ttatgttaataaaa-------------------- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18615746 18 + 33263144 CTACATAAACTATATAAG------------------------- i chlSab2.chr19 C 0 C 0 e mm10.chr15 77160083 129 + 104043685 I e canFam3.chr10 40938363 139 - 69331447 I e calJac3.chr1 198315926 0 + 210400635 C e rheMac3.chr10 80664316 0 + 95678458 C a score=84748.000000 s hg38.chr22_KI270876v1_alt 167105 72 + 263666 TTACATAAACTATATAAGTATAAACTATACTTGCATATGTTAATATAATTACATACACTATA--ATTATAAACT s panTro4.chr22 34544986 74 + 49737984 ttacataaactatataagtataaactatacttgcatatgttaatataattacatacactatataagtataaact i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30958705 74 + 46535552 ttacataaactatataagtataaactatacttgcatatgttaatataattacatacactatataAGGATAAACT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100510855 74 - 115148730 TTACATAAACTATATAAGTATAAACTATACTTGCATATGTTAATATAATTACATAAACTATATAAGTACAAACT i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81090345 74 - 96509753 TTACATAAACTATGTAAGTATAAACTATACTTGTATATGTTAATATAATTACATAAACTATATAAGTATAAACT i macFas5.chr10 T 85 C 0 s papAnu2.chr10 76347846 74 + 90941950 ttacataaactATGTAAGTATAAACTATACTTgtatatgttaatataattacataaacTATATAAGTATAAACT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18615764 8 + 33263144 ------------------------------------------------------------------TATAAACT i chlSab2.chr19 C 0 C 0 e mm10.chr15 77160083 129 + 104043685 I e canFam3.chr10 40938363 139 - 69331447 I e calJac3.chr1 198315926 0 + 210400635 C e rheMac3.chr10 80664316 0 + 95678458 C a score=269298.000000 s hg38.chr22_KI270876v1_alt 167177 135 + 263666 TGCATATGTTAatataattacataaactatataagtataaactatataagttaatataattatataactatgtaagtataaactatataagttaatataattaCACAAACTATATAAGTATAAACTATATAAGTA s panTro4.chr22 34545060 135 + 49737984 tgcatatgttaatataattacataaactatataagtataaactatataagttaatataattatataactatgtaagtataaactatataagttaatataattacacaaactatataagtataaactatataagta i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30958779 120 + 46535552 TGCATATGTTAATataattac---------------ataaactatataagttaatataattatataactatgtaagtataaactatataagttaatataattacacaaactgtataagtataaactatataagta i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100510929 132 - 115148730 TGC--ATGTTAATATAATTACATAAACTATA-AAGTATAAACTATATAAGTTAATATAATTATATAACTATGTAAGTATAAACTATGTAAGTTAATATAATTACATAAACTATATAAGTATAAACTATATAAGTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80664316 131 + 95678458 tgtatatgttaatataattacataaactatataagtataaactatgtaagctaatacaattacataactatgtaagtataaactatataagttaatataattacataaactatataaatataaattata----ta i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81090419 126 - 96509753 TGCATATGT-----TAATTACATAAACTATATAAGTATAAATTATGTAAGCTAATACAATTACATAACTATGTAAGTATAAACTATATAAGTTAATATAATTACATAAACTATATAAATATAAATTATA----TA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76347920 124 + 90941950 TGCATATGT-----TAATTACATAAAC--TATAAGTATAAATTATGTAAGCTAATACAATTACataactatgtaagtataaactatataagttaatataattacataaactatataagtataaattata----ta i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18615772 126 + 33263144 TGCATATGT-----TAATTACATAAACTATATAAGTATAAATTATGTAAGCTAATACAATTACATAACTATGTAAGTATAAACTATATAAGTTAATATAATTACATAAACTATGTAAGTATAAACTATA----TA i chlSab2.chr19 C 0 C 0 e mm10.chr15 77160083 129 + 104043685 I e canFam3.chr10 40938363 139 - 69331447 I e calJac3.chr1 198315926 0 + 210400635 C a score=65240.000000 s hg38.chr22_KI270876v1_alt 167312 52 + 263666 AATAAATTTATATAGTtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg------tgtg s panTro4.chr22 34545195 47 + 49737984 aataaatttatataGTtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt----------- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30958899 51 + 46535552 aataaatTTATATAg-tgtgtgtgtgtgtgtatgtgtgtgtgtgtgtg------tgtg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100511061 57 - 115148730 AATAAATTTATATAA-tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgCGTGCATGTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80664447 32 + 95678458 aataaatttatataa-tgtatgtgtgtgtgtgt------------------------- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81090545 32 - 96509753 AATAAATTTATATAA-tgtgtgtgtgtgtgtgt------------------------- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76348044 32 + 90941950 aataaatttatataa-tgtgtgtgtgtgtgtgt------------------------- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18615898 32 + 33263144 AATAAATTTATATAA-tgtgtgtgtgtgtgtgt------------------------- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198315926 24 + 210400635 AATACATTTATATTG-TGTGTATGT--------------------------------- i calJac3.chr1 C 0 C 0 e mm10.chr15 77160083 129 + 104043685 I e canFam3.chr10 40938363 139 - 69331447 I a score=257016.000000 s hg38.chr22_KI270876v1_alt 167364 85 + 263666 tgtACTGCTTAACACCAAGGTCAACTTCCCATGAAGAAATGGAG---AGC-------CTAATATACTCTACAGCATTTTGAGGACCTGAGCATAC s panTro4.chr22 34545242 82 + 49737984 ---ACTGCTTAACACCAAGGTCAACTTCCCATGAAGAAATGGAG---AGC-------CTAATATACTCTACAGCATTTTGAAGACCTGAGCATAC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30958950 85 + 46535552 tgtACTGCTTAACACCAAGGTCAACTTCCCATGAAGAAATGGAG---AGC-------CTAATATACTCTACAGCATTTTGAAGACCTGAGCATAC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100511118 85 - 115148730 TGTACTGCTTAACACCAAGGCCAACTTCCCATGAAAAAATAGAG---AGC-------CTAATATACTCTACAGCATTTTGCAGACCTGAGCATAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80664479 82 + 95678458 ---aCTGTTAAACACCAAGGTCAACTTTCCATGAAGAAATGGAG---AGC-------CTAATATACTCTATAGGATTTTGCAGACCTGAGCATAC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81090577 82 - 96509753 ---ACTGTTAAACACCAAGGTCAACTTTCCATGAAGAAATGGAG---AGC-------CTAATATACTCTATAGGATTTTGCAGACCTGAGCATAC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76348076 78 + 90941950 ---actgttaAACACCAAGGTCAACTTTCCATGAAGAAATGGAG---AGC-------CTAATATACTCTATAGGATTTTGCAGACCTGAGC---- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18615930 82 + 33263144 ---ACTGTTAAACACCAAGGTCAACTTTCCATGAAGAAATGGAG---AGC-------CTAATATACTCTATAGGATTTTGCAGACCTGAGCATAC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198315950 89 + 210400635 ---ATTGCTTAACATCAAGGTCAACTTCCCATGAAGAATTGGAC---AACCTATGGGCTAATTCACTCTACAGCATTTTGCAGACCTGAGCATAC i calJac3.chr1 C 0 C 0 s canFam3.chr10 40938502 88 - 69331447 TATATTCCTCTACATCAAGGTCGCCTTCCCACAAAGAAGTAGTCTTTGGG-------CTACTTCAGTCCGCAGCATTGTGTAGACCCAAGCATGC i canFam3.chr10 I 139 I 3 e mm10.chr15 77160083 129 + 104043685 I a score=744590.000000 s hg38.chr22_KI270876v1_alt 167449 306 + 263666 CTCAATATCAAAAGTGTCCTTTAggctgggcatagtggctcacgcctgtaa----------tttgggaggccgaggaggtggatcacccgaggatgggagttca---------------------------------------------------------agaccagcctgaccaacatggtgaaaccctgtctctattaaaaata-----caaaaaaaaaaaaa-------ttagctgggtgtggtgatgcccacctgtaatcccagctacttgggaggctg-aggcaggagaactgcttgaacccgggaggcagacgttgcagtgagccgagataacaccactgcactccagcctgggtgacaagaaagaaactctgtttcaa s panTro4.chr22 34545324 313 + 49737984 CTCAATATCAAAAGTGTCCTTTAggctgagcatagtggctcacgcctgtaa----------tttgggaggccgaggaggtggatcacccgaggatgggagttca---------------------------------------------------------agaccagcctgaccaacatggtgaaaccctgtctctattaaaaata-----caaaaaaaaaaaaaaaaaaaattagctgggtgtggtgatgcccacctgtaatcccagctacttgggaggctg-aggcaggagaattgcttgaacccgggaggcagacgttgcagtgagccgagataacaccactgcactccagcctgggtgacaagaaagaaactctgtttcaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30959035 318 + 46535552 CTCAGTATCAAAAGTGTCCTTTAggctgggcatagtggctcacgcctgtaa-tcccagcactttgggaggccgaggaggtggatcacctgagggtgggagttca---------------------------------------------------------agaccagactgaccaacatggtgaaaccctgtctctattaaaaata-----caaaaaaaaaaaaa----aaattagctgggagtggtgatgcccgcctgtaatcccagctacttgggaggctg-aggcgtaagaattgcttgaacccgggaggcagaggttgcagtgagctgagataactccactgcactccagcctgggtgacaagaaagaaactccgtttcaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100511203 316 - 115148730 CTCAATATCAAAAGTGTCCTTTAggctgggcatagtggctcacgcctgtaa-tcccagcactttgggaggccaaggaggtggatcacctgagggtggcagttca---------------------------------------------------------agaccagcctgatcaacatggtgaaaccctgtctctattaaaaata-----caaaaaaaaaaaaa------aatagctgggtgtggtgatgcccacctgtaatcccagctacttgggaagctg-aggcgggagaattgcttgaacccgggaggcagaggttgcagtgagccgagataacaccactgcactccagcctgggtgacaagaaagaaacttcgtttcaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80664561 327 + 95678458 CTCAATATCAAAAGTGTCCTTTAggctgggcatagcggctcacgcctgtaa-tcccagcactttgggaggccgaggcg-----------------ggcagaccannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn--------------------------------------nnnnnnnnnaaaaaaaaaaaaaaaaaa--aaaatttagctgggtgtgatgatgcccacctgtaatcccagctactcgggaggctg-aggcaggagaattgtttgaacccgggaggcagaggttgcagtgagacgagaaaacgccactgcactccagcctgggtgacaagaaagaaactcaatttcaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81090659 325 - 96509753 CTCAATATCAAAAGTGTCCTTTAggctgggcatagcggctcacgcctgtaa-tcccagcactttgggaggccgaggaggtggatcacctgagggtgggagttca---------------------------------------------------------agaccagcctgaccaacatggtgaaaccctgtctctactaaaaatccaaaaaaaaaaaaaaaaaa--aaaatttagctgggtgtgatgatgcccacctgtaatcccagctactcgggaggctg-aggcaggagaattgtttgaacccgggaggcagaggttgcagtgagacgagaaaacgccactgcactccagcctgggtgacaagaaagaaactccatttcaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76348154 316 + 90941950 ----ATATCAAAAATGTCctttaggctgggcatagtggctcacgcctgtaa-tcccagcactttgggaggccgaggaggtggatcacctgagggtgggagttca---------------------------------------------------------agaccagcctgaccaacatggtgaaaccctgtctctactaaaaatc-----aaaaaaaaaaaaaa--aaaatttagctgggtgtgatgatgcccgcctgtaataccagctactcgggaggctg-aggcaggagaattgtttgaacccgggaggcagaggttgcagtgagacgagaaaacgccactgcactccagcctgggtgacgagaaagaaactccatttcaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18616012 315 + 33263144 CTCAATATCAAAAGTGTCCTTTAggctggacatagcggctcacgcctgtaa-ccccagcactttggcaggctgaggaggtggatcacctgagggtgggagttca---------------------------------------------------------agaccagcctgaccaacatggtgaaaccctgtctctactaaaaatc----------aaaaaaaaa--aaaaattagctgggtgtggtgatgcccgcctgtaatcccagctacttgggaggctg-aggtaggagaattgtttgaacccgggaggcagaggttgcagtgagacgagaaaacgccactgcactccagcctgggtgacaagaaagaaactccgtttcaa i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198316039 274 + 210400635 CACAGTGTCAAAAGTGTCCTTTAggccaggaatggtagctcatgcctctaaatcccagcactttgggaggttgaggtggtagatcacccgaggttgggagtttg---------------------------------------------------------aggccagcctggccaacatggtgaaaccctgtttcta--------------ctaaaaaaaaaaaa--tagctttttttgtgtgtgg----------------------------gggggattataggcgtg---gtggtatacacctagggg---aaggttgcagtgagct-----aatgccattgcactccagcctgggtgacaagagagaagctccatttcat i calJac3.chr1 C 0 C 0 e mm10.chr15 77160083 129 + 104043685 I e canFam3.chr10 40938590 3 - 69331447 I a score=20178.000000 s hg38.chr22_KI270876v1_alt 167755 7 + 263666 aagaaaa s panTro4.chr22 34545637 7 + 49737984 aagaaaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30959353 7 + 46535552 aagaaaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100511519 7 - 115148730 aagaaaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80664888 7 + 95678458 aagaaaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81090984 7 - 96509753 aagaaaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76348470 7 + 90941950 aagaaaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18616327 7 + 33263144 aagaaaa i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198316313 6 + 210400635 aa-aaaG i calJac3.chr1 C 0 C 0 s canFam3.chr10 40938593 7 - 69331447 AGGTAAA i canFam3.chr10 I 3 C 0 e mm10.chr15 77160083 129 + 104043685 I a score=792158.000000 s hg38.chr22_KI270876v1_alt 167762 213 + 263666 aGTGTCCTTTAGATAGGTAAATTTCTGTCTCTCAATTTTCTAGATGCCTAATATCCTTAAGCTGTCCTTGGCTACCCTAAACCCTCAAATCAGGAAATTTAGCTATACCTCCAATAATTTAAGACCCTGTTTCCTCTTCCTCCAACTGCCCCATTCACCACT----------------------------TGGATGACAGGTTA-AG----TAAAAGTGC------CTAAGGAAAACCTGTGATAAAAGACA s panTro4.chr22 34545644 213 + 49737984 aGTGTCCTTTAGATAGGTAAATTTCTGTCTCTCAATCTTCTAGATGCCTAATATCCTTAAGCTGTCCTTGGCTACCCTAAACCCTCAAATCAGGAAATTTAGCTATACCTCCAATAATTTAAGACGCTGTTTCCTCTTCCTCCAACTGCCCCATTCACCACT----------------------------TGGATGACAGGTTA-AG----TAAAAGTGC------CTAAGGAAAACCTGTGATAAAAGACA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30959360 213 + 46535552 aGTGTCCTTTAGATAGGTAAATTTCTGTCTCTCAATCTTCTAGACGCCTAATATCCTTAAGCTGTCCTTGGCTACCCTAAACCCTCAAACCAGGAAATTTAGCTATACCTCCAATAATTTAAGACCTTGTTTCCTCTTCCTCCAACTGCCCCATTCACCACT----------------------------TGGATGACAGGTTA-AG----TAAAAGTGC------CTAAGGAAAACCTGTGATAAAAGACA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100511526 213 - 115148730 aGTGTCCTTTAGACAGGTAAATTTCTGTCTCTCAATCTTCTAGATGCCTAATATCCTTAAGCTGTCCTTGGCTACCCTAAACCCTCAAATCAGGAAATTTAGCTATACCTCCAATCATTTAAGACCCTGTTTCCTCTTCCTCCAACTGCCCCATTCACCACT----------------------------TGGATGACAGGTTA-AG----TAAAAGTGC------CTAAGGAAAACCTGTGATAAAAGACA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80664895 211 + 95678458 aGTGTCCTTTAGATAGGTAAATTTCTG--TCTCATTCTTCTAGATGCCTAATGTCCTTAAGCTGTCCTTCGCTACCCTAAACCCTCAAATCAGGAAATTCAGCTATACCTCCAATAATTTAAGACCCTGTTTCCTCTTCCTCCAACTGCCCCGTTCGCCACT----------------------------TGGATGACAGGTTA-AG----GAAAACAGC------CTAAGGAAAACCTGTGATAAAAGACA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81090991 211 - 96509753 aGTGTCCTTTAGATAGGTAAATTTCTG--TCTCATTCTTCTAGATGCCTAATATCCTTAAGCTGTCCTTCGCTACCCTAAACCCTCAAATCAGGAAATTCAGCTATACCTCCAATAATTTAAGACCCTGTTTCCTCTTCCTCCAACTGCCCCGTTCGCCACT----------------------------TGGATGACAGGTTA-AG----GAAAACAGC------CTAAGGAAAACCTGTGATAAAAGACA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76348477 211 + 90941950 agtgtcCTTTAGATAGGTAAATTTCTG--TCTCATTCTTCTAGATGCCTAATATCCTTAAGCTGTCCTCCGCTACCCTAAACCCTCAAATCAGGAAATTCAGCTATACCTCCAATAATTTAAGACCCTGTTTCCTCTTCCTCCAACTGCCCCGTTCGCCACT----------------------------TGGATGACAGGTTA-AG----GAAAACGGC------CTAAGGAAAACCTGTGATAAAAGACA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18616334 211 + 33263144 aGTGTGCTTTAGATAGGTAAATTTCTG--TCTCATTCTTCTAGATGCCTAATATCCTTAAGCTGTCCTTTGCTACCCTAAACCCTCAAATCAGGAAATTCAGCTATACCTCCAATAATTTAAGACCCTGTTTCCTCTTCCTCCAACTGCCCCGTTCGCCACT----------------------------TGGATGACAGGTTA-AG----GAAAACGGC------CTAAGGAAAACCTGTGATAAAAGACA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198316319 211 + 210400635 GGTGTCCTTTAGATAGGTTAGTTTGTC--TCTCAATCTTCCAGATGCCTAATATCCTTAAGCTGTCCTTGGCCACCCTAAACCCTCAAATCAGGAAATTTATCTATACCTCCAATACTTTAAGACCCCGCTTCCTCTTCCTCCTATTGCCCCATTTGCCACT----------------------------TGGATGACAGTTTC-AG----TAAAAGTGT------CTAAGGAAAACCTGTGATAAAAGACA i calJac3.chr1 C 0 C 0 s mm10.chr15 77160212 206 + 104043685 AGTTTCATTTGCATAAGTAAG--------TCGAACTCCCCCATAGGCCAAGCATCCTTGGGCTGCCCTCGGCTGTCCTAAACCCTCGA-----TACATTTAGCTAT--CTCCAACGACTGAAGACCCTGCTTCCCCTTCCTGTAACTGCCTCACTAGTAGTT------------------------------GGTGACAGGGCA-GTAGTCTAGAATAGTTCTTCACTAAGTACCAATTGTGGCAATAAACA i mm10.chr15 I 129 C 0 s canFam3.chr10 40938600 241 - 69331447 TGGATCTTTCAGATAGGCAACTTCCTGTCTCCCAATCTTCCAGATGCCCAATATCCTTAAGCTGTACTTGGCTGTCCTAAACTCTCAAATCCGGACACTTAGCTACACCGCCTATAATGTAAGACCTTGCTGCTTCTTTCTCCAACTGCC-CATTTACCTCAAAATGATCATCAGAGCCAACATGTTCAGTGGGTGACAGGTTACAT----AAAAACTGC------CTCAGGAAAAACTGTGATAATACACA i canFam3.chr10 C 0 I 1520 a score=49640.000000 s hg38.chr22_KI270876v1_alt 167975 15 + 263666 ATACCCTTAACTTGC s panTro4.chr22 34545857 15 + 49737984 ATACCCTTAACTTGC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30959573 15 + 46535552 ATACCCTTAACTTAC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100511739 15 - 115148730 ATACCCTTAACTTGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80665106 15 + 95678458 ATACCCTTAACTTGC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81091202 15 - 96509753 ATACCCTTAACTTGC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76348688 15 + 90941950 ATACCCTTAACTTGC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18616545 15 + 33263144 ATACCCTTAACTTGC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198316530 13 + 210400635 ATGCCCTTAACTT-- i calJac3.chr1 C 0 C 0 s mm10.chr15 77160418 15 + 104043685 ACACCCATTATTTGC i mm10.chr15 C 0 C 0 e canFam3.chr10 40938841 1520 - 69331447 I a score=447000.000000 s hg38.chr22_KI270876v1_alt 167990 132 + 263666 AACA--AGTTACATTTTAACCATCTGA-TCAGAGGCAGTAAATGTTTAAT----------CTGAAAGA-------------------------------------------------------------------------------------------CTGTCTATAAGAATA-------------------------------ACTTCAGGAACAGTTTCT---TAAATAGA---TTTGTCTGGGCAGGGAGACTACATTCATTGTCCCTT s panTro4.chr22 34545872 132 + 49737984 AACA--AGTTACATTTTAACCATCTGA-TCAGAGGCAGTAAATGTTTAAT----------CTGAAAGA-------------------------------------------------------------------------------------------CTGTCTATAAGAATA-------------------------------ACTTCAGGAACAGTTTCT---TAAATAGA---TTTGTCTGGGCAGGGAGACTACATTCATCGTCCCTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30959588 132 + 46535552 AACA--AGTTACATTTTAACCATCTGA-TCAGAGGCAGTAAATGTTTAAT----------CTGAAAGA-------------------------------------------------------------------------------------------CTGTCTATAAGAATA-------------------------------ACTTCAGGAACAGTTTCT---TAAATAGA---TTTGTCTGGGCAGGGAGACTACATTCATCGTCCCTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100511754 132 - 115148730 AACA--AGTTACATTTTAACCATCTGA-TCAGAGGCAGTAAATATTTAat----------ccgaaaga-------------------------------------------------------------------------------------------gtgtctataagaata-------------------------------acttcaggaacagtttct---taaataga---tttgtctgggcagggagactacattcatcgtccctt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80665121 132 + 95678458 ACCA--AGTTACATTTTAACCATCTGA-TCACAGGCAGTAAATGTTTAat----------ccgaaaga-------------------------------------------------------------------------------------------gtgtctgtaagaata-------------------------------atttcaggaacagcttct---taaataga---tttgtctgcgcagggagactacattcatcgtccctt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81091217 132 - 96509753 ACCA--AGTTACATTTTAACCATCTGA-TCACAGGCAGTAAATGTTTAAT----------CCGAAAGA-------------------------------------------------------------------------------------------GTGTCTGTAAGAATA-------------------------------ATTTCAGGAACAGCTTCT---TAAATAGA---TTTGTCTGCGCAGGGAGACTACATTCATCGTCCCTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76348703 132 + 90941950 ACCA--AGTTACATTTTAACCATCTGA-TCACAGGCAGTAAATGTTTAAT----------CCGAAAGA-------------------------------------------------------------------------------------------GTGCCTGTAAGAATA-------------------------------ATTTCAGGAACAGTTTCT---TAAATAGA---TTTGTCTGGGCAGGGAGACTACATTCATCGTCCCTT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18616560 132 + 33263144 ACCA--AGTTACATTTTAACCATCTGA-TCACAGGCAGTAAATGTTTAAT----------CCGAAAGA-------------------------------------------------------------------------------------------CTGTCTGTAAGAATA-------------------------------ATTTCAGGAACAGTTTCT---TAAATAGA---TTTGTCTGGGCAGGGAGACTACATTCATCGTCCCTT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198316543 131 + 210400635 -ACA--AGTTACATTTTAACCATCTGG-TTAGAGGCCGTAAATGTTTAAT----------CAGAAAAA-------------------------------------------------------------------------------------------GTGTGTATAAGAATA-------------------------------ATTTCAGGAACAGTTTCT---TAAACAGA---TTTGTCTGGGCAGGGAGACTACATTCTTTGTCCCAT i calJac3.chr1 C 0 C 0 s mm10.chr15 77160433 266 + 104043685 AACAATAGCTACATTTTAACCAGTCAG-TCAGAGGTGACAGGTGTTTAATATTAGACCACCCACAAGACTTTCAGGGCCTGGCCTGGTCAACCCTAGTGTTAGGGAGGGCGATTCACATGGAACCTGGGCTCCAGGCCAGCAAGTTTCATAGTGCAATCCTGtataaaagaataaaataattaaataaatGAAGGACAAAGGATTATTTTAGGTAAATTTTCT---CTTATTAT---TTTTTTTTGTGAGAAATAAAACCTAAAGCATCTCTT i mm10.chr15 C 0 C 0 s canFam3.chr10 40940361 126 - 69331447 aaca--agtTATATTTTAACCATTCAAGTCAGAGGCAGTA-ATATTTAAT----------CCAAAAGA-------------------------------------------------------------------------------------------------------ATA-------------------------------ATTTCAGGAATAGTTTCTCAATAAATAGAATTTTTTTCTGGGCAGGGAGGCTATAGTCATTGTTCTTT i canFam3.chr10 I 1520 I 235 a score=230338.000000 s hg38.chr22_KI270876v1_alt 168122 70 + 263666 AAA----TCACAAGCAAGC-CTGTATCTCCTTACTCTGCCTGATT--TTAAACTAATTTGG-CCAGACTAGGTTCTAC s panTro4.chr22 34546004 70 + 49737984 AAA----TCACAAGCAAGC-CTGTATCTCCTTACTCTGCCTGATT--TTAAACTAATTTGG-CCAGACTAGGTTCTAC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30959720 70 + 46535552 AAA----TCACAAGCAAGC-CTGTATCTCCTTACTCTGCCTGATT--TTAAACTAATTTGG-CTAGACTAGGTTCTAC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100511886 70 - 115148730 aaa----tcacaagcaagc-ctgtatctccttactctgcctGATT--TTAAACTAATTTGG-CCAGACTAGGTTCTAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80665253 70 + 95678458 aaa----tcacaagcaagc-ccgtatctccttactctgcctGATT--TTAAACTAATTTGG-CCAGACTAGGTTCTAC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81091349 70 - 96509753 AAA----TCACAAGCAAGC-CCGTATCTCCTTACTCTGCCTGATT--TTAAACTAATTTGG-CCAGACTAGGTTCTAC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76348835 70 + 90941950 AAA----TCACAAGCAAGC-CCGTATCTCCTTACTCTGCCTGATT--TTAAACTAATTTGG-CCAGACTAGGTTCTAC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18616692 70 + 33263144 AAA----TCACAAGCAAGC-CCATATCTCCTTACTCTGCCTGATT--TTAAATTAATTTGG-CCAGACTAGGTTCTAC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198316674 71 + 210400635 AAA----TCACAAGCCAGTACCTTATCTCCTTACGCTGCCTGATT--TTAATCTAATTTGG-CCAGATCGGGTTCTAC i calJac3.chr1 C 0 C 0 s mm10.chr15 77160699 77 + 104043685 AACCCTTCCTCTAGCGATC-CTCCATCTTTTTAACCTACCTGTGTCCCTAATCTGATCTGGTCCAAATTGGATTCTGC i mm10.chr15 C 0 C 0 e canFam3.chr10 40940487 235 - 69331447 I a score=2072817.000000 s hg38.chr22_KI270876v1_alt 168192 565 + 263666 GAAAATTATAACTAATAAAATAATCATTTTCAATGGCACACTCTTAAAATAGGCATGATTT-----------------AGCAATGAAAGGTCAAGTACCTAAAATATTTTCGAACTTTCTGTTGAAGAGAACTCACTTTGTTTCATTAACTCAAAACTAGCAATTCTAGAAATAACTTAATTAAAAATAGATGTAAAACCTTTCA-TTAAAAGAAATA-CTGTTCAATCATGTCCTCCATAACGTCCAACTGTATAATGCATTAGTATGAAACTGCAAGCATTATGCAATGGAAAGCTTGGATTTAACTAAGCAAAAGAATATATAAAAGAAGCT-----AAA---AACATTTTATAACTGTAGT-----TAAGAGTTTGGGTAGTAACCAACCATCTACTACTCATTTATAAATGCACTGAAA-AAAACTGTTACTTTAAAAAAGTAATAAATAAGATTGTAAAATAGCTTGGGATCCTTCAATTTAAAATTGTTTTTTTTT-AATCCCATTAGCTT--TCCT-ATGTGGCAGAATGGAGAGTAAACCCTTAAATTTTAATATCCCATTACCTCCATTTCTAAACGACGTTAATTTCAGAT s panTro4.chr22 34546074 574 + 49737984 GAAAGTTATAACTAATAAAATAATCATTTTCAATGGCACACTCTTAAAATAGGCATGATTT---T----AACAATAAGAGCAATGAAAGGTCAAGTACCTAAAATATTTTTGAACTTTCTGTTGAAGAGAACTCACTTTGTTTCATTAACTCAAAACTAGCAATTCTAGAAATAACTTAATTAAAAATAGATGTAAAACCTTTCA-TTAAAAGAAATA-CTGTTCAATCATGTCCTCCATAACGTCCAACTGTATAATGCATTAGTATGAAACTGCAAGCATTATGCAATGGAAAGCTTGGATTTAACTAAGCAAAAGAATATATAAAAGAAGCT-----AAA---AACATTTTATAACCGTAGT-----TAAGAGTTTGGGTAGTAACCAACCATCTACTACTCATTTATAAATGCACTGAAA-AAAACTGTTACTTTAAAAAGGTAATAAATAAGATTGTAAAATAGCTTGGGATCCTTCCATTTAAAATTGTTTTTTTT--AATCCCATTAGCTT--TCCT-ATGTGGCAGAATGGAGAGTAAACCCTTAAATTTTAACATCCCATTACCTCCATTTCTAAACGACGTTAATTTCAGAC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30959790 573 + 46535552 AAAAATTATAACTAATAATATAATCATTTTCAATGGCACACTCTTAAAATAGGCATGATTT---T----AACAATAAGAGCAATGAAAGGTCAAGTACCTAAAATATTTTCGAACCTTCTGTTGAAGAGAACTCACTTTGTTTCATTAACTCAAAACTAGCAATTCTAGAAATAACTTAATTAAAAATAGATGTAAAACCTTTCA-TTAAAAGAAATA-CTGTTCAATCATGTCCTCCATAACGTCCAACTGCATAATGCATTAGTATGAAACTGCAAGCATTATGCAATGAAAAGCTTGGATTTAACTAAGCAAAAGAATATATAAAAGAAGCT-----AAG---AACATTTTATAACCGTAGT-----TAAGAGTTTGGGTAGTAACCAACCATCTACTACTCATTTATAAATGCACTGAAA-AAAACTGTTACTTTAAAAAAGTAATAAATAAGATTGTAAAATAGCTTGGGATCCtttaa-ttaaaaaaatttttttt--aatCCCATTAGCTT--TCCT-ATGTGGCAGAATGGAGAGTAAACCCTTAAATTTTAACATCCCATTATATCCATTTCTAAATGACCTTAATTTCAGAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100511956 576 - 115148730 AAAAATTATAACTAATAAAATAGTCATTTTCAATGGCACACTCTTAAAGTAGACATGATTT---T----AACAATAAGAGCAATGAAAGGTCAAGTGCCTAAAATATTTCTGAACTTGCTGTTGAAGAGAACTCACTTTGTTTCATTAACTCAAAACTAGCAATTCTAGAAATAACTTAATTAAAAATAGATGTAAAACCTTTCA-TTAAAAGAAATA-CTGTTCAATCATGTCCTCCATAATGTCCAACTGCATAATGCATTAGTATGAAACTGCAAGCATTATGCAATGAAAAGCTTGGATTTAACTAAGCTTAAGAATATATAAAAGAAGCT-----AAA---AACATTTTATAACTGTAGT-----TAAGAGTCTGGGTAGTAACCAACCATCTACTACTCATTTATAAATGCACTGAAA-AAAACTGTTACTTTAAAAAAGTAATAAATAAGATTGTAAAATAGCTTAGGATCCTTCAATTTAAAATTGTTTTTTTTTAAATCCCATTAGCTT--TACT-ATGTGGCAGAATGGAGAGTAAACCCTTAAATTTTAACATCTCATTACCTCCATTTCTAAACGACCTTAATTTCAGAT i nomLeu3.chr7b C 0 I 303 s rheMac3.chr10 80665323 575 + 95678458 AAAAATTATAACTAATACCATAATCATTTTCAATGGCACACTCTTAAAATAGGCATGATTT---T----AACAATAAGAGCAATGAAAGGTCAAGTACCTAAAATACTTTCGAACCTTCTGTTGAAGAGAACTCACTTTGTTTCATTAACTCAAAACTAGCAATTCTAGAAATAACTTAATTAAAAATAGATGTAAAACCTTTCA-TTAAAAGAAATA-CTGTTCAATCATGTCCTCCATAACGTCCAACTGCATAACGCATTAGTATGAAACTGCAAGCATTATGCAATGTAAAGCTTGAATTTAACTAAGCATAAGAATATATAACAGAAGCT-----AAAAAGAACATTTTATAACCGTAGT-----TAAGAGTTTGGGTAGTAACCAACCATCTACTACTCATTTATAAATGCACTGAAA-AAAAACTTCACTTTAAAAAAGTAATAAATAAGATTGTAAAATAGCTTTGGATCCTTCAATTTAAAATTGTTTTTTT---AATCCCATTAGCTT--TCCT-ATGTGGTGGAATGGAGAGTAAACCCTTACATTTTAACATCCCATTACCTCCATTTCTAAAGGACC-TAATTTCAGAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81091419 575 - 96509753 AAAAATTATAACTAATACCATAATCATTTTCAATGGCACACTCTTAAAATAGGCATGATTT---T----AACAATAAGAGCAATGAAAGGTCAAGTACCTAAAATACTTTCGAACCTTCTGTTGAAGAGAACTCACTTTGTTTCATTAACTCAAAACTAGCAATTCTAGAAATAACTTAATTAAAAATAGATGTAAAACCTTTCA-TTAAAAGAAATA-CTGTTCAATCATGTCCTCCATAACGTCCAACTGCATAACGCATTAGTATGAAACTGCAAGCATTATGCAATGTAAAGCTTGAATTTAACTAAGCATAAGAATATATAACAGAAGCT-----AAAAAGAACATTTTATAACCGTAGT-----TAAGAGTTTGGGTAGTAACCAACCATCTACTACTCATTTATAAATGCACTGAAA-AAAAACTTCACTTTAAAAAAGTAATAAATAAGATTGTAAAATAGCTTTGGATCCTTCAATTTAAAATTGTTTTTTT---AATCCCATTAGCTT--TCCT-ATGTGGTGGAATGGAGAGTAAACCCTTACATTTTAACATCCCATTACCTCCATTTCTAAAGGACC-TAATTTCAGAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76348905 575 + 90941950 AAAAATTATAACTAATACAATAATCATTTTCAATGGCACACTCTTAAAATAGGCATGATTT---T----AACAATAAGAGCAATGAAAGGTCAAGTACCTAAAATACTTTCGAACCTTCTGTTGAAGAGAACTCACTTTGTTTCATTAACTCAAAACTAGCAATTCTAGAaataacttaattaaaaatagatgtaaaacctttca-ttaaaagaaata-ctGTTCAATCATGTCCTCCATAATGTCCAACTGCATAACGCATTAGTATGAAACTGCAAGCATTATGCAATGAAAAGCTTGAATTTAACTAAGCATAAGAATATATAACAGAAgct-----aaaaagaacattttataacCGTAGT-----TAAGAGTTTGGGTAGTAACCAACCATCTACTACTCATTTATAAATGCACTGaaa-aaaaactttactttaaaaaagtaataaataagatTGTAAAATAGCTTTGGATCCttcaatttaaaattgttttttt---aatcccATTAGCTT--TCCT-ATGTGGTGGAATGGAGAGTAAACCCTTACATTTTAACATCCCATTACCTCCATTTCTGAAGGACC-TAATTTCAGAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18616762 574 + 33263144 AAAAATTATAACTAATACAATAATCATTTTCAATGGCACACTCTTAAAATAGGCATGATTT---T----AACAATAAGAGCAATGAAAGGTCAAGTACCTAAAATACTTTCGAACCTTCTGTTGAAGAGAACTCACTTTGTTTCATTAACTCAAAACTAGCAATTCTAGAAATAACTTAATTAAAAATAGATGTAAAACCTTTCA-TTAAAAGAAATA-CTGTTCAATCATGTACTCCATAACGTCCAACTGCATAACGCATTAGTATGAAACTGCAAGCATTACGCAATGAAAAGCTTGAATTTAACTAAGCATAAGAATATATAACAGAAGCT-----AAAAAGAACATTTTATAACCGTAGT-----TAAGAGTTTGGGTAGTAACCAACCATCTACTACTCATTTATAAATGCACTG-AA-AAAAACTTTACTTTAAAAAAGTAATAAATAAGATTGTAAAATAGCTTTGGATCCTTCAATTTAAAATTGTTTTTTT---AATCCCATTAGCTT--TCCT-ATGTGGTGGAATGGAGAGTAAACCCTTACATTTTAACATCCCATTACCTCCATTTCTAAACGACC-TAATTTCAGAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198316745 548 + 210400635 AAAAATTCTAACTAATAAAATAATCATTTTCAATGGCACACTCTTAAAACAGGCACGATTT---T----AACAATATAAGCAATGAAAGGTCAAGTACCTAAAATATTTTCTAACGTTCTGTTGAAGATAACTCACTTTGTTTCATTAATTCAAAACTAGCAATTTTAGAAATAAT----TTAGAAATAGACGTAAAACCTTTCA-TTAAAAAAAAAATCTATTCAGTCATGTCCTCCATAACATCCAACTGCATAATGCATTAGTATAAAACTGCAAGCATTATGCAATGAAAAGCTTGGCTT----TAAGCATAAGAATATATAACAGAAGCT-----AAAAAATACATTTTATAACCATAGT-----TAAGAGTCTGGGTAGCAACCAACCATCCAATACTCATTTATAACTGCCCTGAAA-AAAATTGTTACCTTAAAAAAGTAATAAATAAGATCTTAAAATAGCTTTGGGTCCTTCAATTTAAAATTGCTTTTTC---AAT------------------------TAGAATGAAGAGTAAACCCTTAAATTTTAACATCCTATCGCCTCCATTTCTAAAAGACTTTAATTTCAGAT i calJac3.chr1 C 0 C 0 s mm10.chr15 77160776 545 + 104043685 ATGAATTATAAGTAATAAAATAATAAATTTCAATTGCACGTTCTC--CTCAGGCATTATTTTATT----AACATTAAGAGCAATGACAGGTCAGGCACTT----TATT-----ACCTTCGGTTAAAAAGAACTCACTTTGTCTCATTATCTCAACATTAGCAATCCTAGAAATACTCAATTAAAAAATAGATACAAATCTTCTCA-TTAAAA-AAACA-CTATTCAGTCTTGTCCCTAAGCGCGTTC-ATTGTACAATGCCTTGGTACACAACTCTAGGTATTACGCAATG---AGTTCTGAGTAAAACAAGTGTTACA--ACACAATAGAAACTTCTTAAAA---AGCATT-------CATAGTG----TAAGAGCATAGA--------AAACAACTATTGCTCATTTACAAACACAATG----AAAACTGTT-CCATCAAAATGTAGTAAATAAGTTCATAAAATAGTTTCTAACCTTTCTGTGTAAAACTGTTCTTTC---AGT-CCATTAATTTGCTCCTGGTGTGGCAGAATGGAGAAAGCACCCTTA-ACTGTAACATCTCAGCCCCTGGGTCCCAGAGCTGCC-TAATTTTAGAT i mm10.chr15 C 0 C 0 s canFam3.chr10 40940722 577 - 69331447 GTATTTTATAACTTGTAA---AACCAATTTCAATCGCACACTCTTAAGACATGCGTGATTT---TTATCAAGAATAAGAGCAATGAATGATAAAGTTCTGAAAATACTTCATTGCCGTATGTTGAGAAGGACTCAC--TATTTCATTAACTCAACACTAGCAATTCTAGAAATA-CTTAATTTTAAAAAGGTGCAAAATCTCTAGTTTTTAAAAAATA-CTGTTCAGCCAAATCTTCCATAATATCTAATGGCATAAAACACTGGTACAGAACCGCACAGGTTATTCACTGCATAGCTTTAATTTAACTAAGTATAAGA--ATGTAACAGAAGCC-----AGTAAGAAAATTTTGCAACCACAGTGAAGATAAAAATTTAGGTAGCAAATAACCATCTATTACCCATTTATAAATGCCCTGAAAGAAAACTGTTACCCTAACTG---AATTAGTAAGACTGTAAAATAGTTTTGGACCTTTCGATTTTAAATTGTTTTTTC---ATTGCCATTAACTT--CCCTGATGTGGTAGAATGGAAAGCATACTCTTAAATTTTAACATCCCATTACCTGCATTTCTAAACTACCTTAATTTTACAT i canFam3.chr10 I 235 C 0 a score=511404.000000 s hg38.chr22_KI270876v1_alt 168757 162 + 263666 AGAATAAACCTAC-AAATGGAGTAAAGCCAGGAAAGTGTAGTTTCAAATACTGTGCACTACATTTATCAGTACTAAATACTAATAACC--AAAAAAATT-GGGGGTGGA-AAATTCATCTTATTATGAATATTGATTAGAATTTTGCTGC-AAAAGACTTTCATCAAA s panTro4.chr22 34546648 162 + 49737984 AGAATAAACCTAC-AAATGGAGTAAAGACAGGAAAGTGTAGTTTCAAATACTGTGCACTACATTTATCAGTACTAAATACTAATAACC--AAAAAAATT-GGGGGTGGA-AAATTCATCTTATTATGAATATTGATTAAAATTTTGCTGC-AAAAGACTTTCATCAAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30960363 117 + 46535552 AGAATAAACCTAC-AAATGGAGTAAAGCCAGAAAAGTGTAGTTTCAAATACTGTGCACTACATTTATCAGTACTAAATACTAATAACC--AAAAAAATT-GGGGGTGGA-AAA----------------------------------------------TTCATCAAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100512835 162 - 115148730 agaataaaCCTAC-AAATGGAGTAAAGCCAGGAAAGTGTAGTTTCAAATACTTTGCACTACATTTATCAGTACTAAATACTAATAACC--AAAAAAATT-GGGGGTGGA-AAATTCATTTTATTATGAATATTGATTAGAAATTTGCTGC-AAAAAACTTTCATCAAA i nomLeu3.chr7b I 303 C 0 s rheMac3.chr10 80665898 161 + 95678458 AGAATAAACCTACTAAATGGAGTAAAGCCAGGAAAGTGTAGTTTCAAATACTGTGCACTACATTTATCAGTACTAAATATTAATAACCAAAAAAAAATT-GGGGGTGGA-AAATTCATCTT-TTATGAATATTGATTAGAATTTTGCTGC-AAAAGACTTTCATC--- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81091994 161 - 96509753 AGAATAAACCTACTAAATGGAGTAAAGCCAGGAAAGTGTAGTTTCAAATACTGTGCACTACATTTATCAGTACTAAATATTAATAACCAAAAAAAAATT-GGGGGTGGA-AAATTCATCTT-TTATGAATATTGATTAGAATTTTGCTGC-AAAAGACTTTCATC--- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76349480 161 + 90941950 AGAATAAACCTACTAAATGGAGTAAAGCCAGGAAAGTGTAGTTTCAAATACTGTGCACTACATTTATCAGTACTAAATattaataaccaaaaaaaaatt-gggggtggA-AAATTCATCTT-TTATGAATATTGATTAGAATTTTGCTGC-AAAAGACTTTCATC--- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18617336 161 + 33263144 AGAATAAACCTACTAAATGGAGTAAAGTCAGGAAAGTGTAGTTTCAAATACTGTGCACTACATTTATTAGTACTAAATATTAATAACAAAAAAAAAATT-GGGGGTGGA-AAATTCATCTT-TTATGAATATTGATTAGAATTTTGCTGC-AAAAGACTTTCATC--- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198317293 165 + 210400635 AGATTAAACCTACTAAATGGAGTAAAGCCAGGAAAGTGTAGTTTCAAATACCGCGTGCTACATTTATCAATACTAAATATTAATAACA--AAAAAAATTGGGGGGTGGA-AAATTCATCTTATTATGAATTTTGATTACAACTTTGCTGCAAAAAAACTTTTATCAAG i calJac3.chr1 C 0 C 0 s mm10.chr15 77161321 159 + 104043685 GGAATAAAAC-ACTAAACACAGCAAGG-CAGGAAAGCATGGTTTAAAATCCTAAACACTAAACTCACCAATAATAAATCCGAGTGAAT--AAAAAGACC-GAGAGCACATCAATTCATACTATCACCAATG--AATCAAAGTTTCACTGC-CAGCGATTTTATTC-AA i mm10.chr15 C 0 C 0 s canFam3.chr10 40941299 156 - 69331447 AGAATAAATCTACTAAACAGACCAAAGTCAGGGAAGT---GTTTCAAATACTGAGCACAACATTTATCAATACTAAATCTTAATGATT--GAAAAGATT-TGGGGTGGC-AAATTCATTTTATTATAAAT---GAATAAAATTTTACTGC-AAAAGACTTTAGCAAA- i canFam3.chr10 C 0 I 459 a score=443.000000 s hg38.chr22_KI270876v1_alt 168919 1 + 263666 C s panTro4.chr22 34546810 1 + 49737984 C i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30960480 1 + 46535552 C i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100512997 1 - 115148730 C i nomLeu3.chr7b C 0 C 0 s calJac3.chr1 198317458 1 + 210400635 T i calJac3.chr1 C 0 C 0 s mm10.chr15 77161480 1 + 104043685 T i mm10.chr15 C 0 C 0 e canFam3.chr10 40941455 459 - 69331447 I e rheMac3.chr10 80666059 0 + 95678458 C e papAnu2.chr10 76349641 0 + 90941950 C e macFas5.chr10 81092155 0 - 96509753 C e chlSab2.chr19 18617497 0 + 33263144 C a score=72277.000000 s hg38.chr22_KI270876v1_alt 168920 24 + 263666 CATGTCATAATTTCTGAACAGGAA s panTro4.chr22 34546811 24 + 49737984 CATGTCATAATTTCTGAACAGGAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30960481 24 + 46535552 CATATCATAATTTCTGAACAGGAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100512998 24 - 115148730 CATGTCATAATTTCTGAACAGGAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80666059 16 + 95678458 --------AATTTCTAAACAGGAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81092155 16 - 96509753 --------AATTTCTGAACAGGAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76349641 16 + 90941950 --------AATTTCTGAACAGGAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18617497 16 + 33263144 --------AATTTCTGAACAGGAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198317459 24 + 210400635 CACATCATAATTTCTAAACAGAAA i calJac3.chr1 C 0 C 0 s mm10.chr15 77161481 22 + 104043685 TGTGTCATAG--TCTGAAGAGAAG i mm10.chr15 C 0 C 0 s canFam3.chr10 40941914 24 - 69331447 CATGTCATAATTTCTGAACAGGAA i canFam3.chr10 I 459 C 0 a score=457987.000000 s hg38.chr22_KI270876v1_alt 168944 138 + 263666 CTCTTTAATCCACCCCAAAATT--------------------GGGAGGGGGAGATGGTCAATTTCCTTCCTC-AAAAAATTCAATTACATACTGTAATTATTTTTT---CATATATGTCTAATACTTC--AATTCACTTGGGAAACATTTTTACTTTTTCAACT s panTro4.chr22 34546835 138 + 49737984 CTCTTTAATCCACCCCAAAATT--------------------GGGAGGGGGAGATGGTCAATTTCCTTCCTC-AAAAAATTCAATTACATACTGTAATTATTTTTT---CATATATCTCTAACACTTC--AATTCACTTGGGAAACATTTTTACTTTTTCAACT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30960505 138 + 46535552 CTCTTTAATCCACCCCAAAATT--------------------GGAAGGGGGAGATGGTCAATTTCCTTCCTC-AAAAAATTCAATTACATACTGTAATTATTTTTT---CATATATTTCTAATACTTC--AATTCACTTGGGAAACATTTTTACTTTTTCAACT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100513022 138 - 115148730 CTCTTTAATCCACCCCAAAATT--------------------GGGAGGGGGAGATGGTCAATATCCTTCCTC-AAAAAACTCAATTACATACTGTAATTATTTTTT---CATATATCTCCAATACTTC--AATTCATTTGGGAAACATTTTTACTTTTTCAACT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80666075 138 + 95678458 CTCTTTAATCCACCCCAAAACT--------------------GGGAGGGGTAGATGGTCAATTTCCTTCCTC-AATAAATTCAATTACATACTGTAATTATTTTTT---CATATATCTCCAATACTTC--AATTCACTTGGGAAACATTTTTACTTTTTCAACT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81092171 138 - 96509753 CTCTTTAATCCACCCCAAAACT--------------------GGGAGGGGTAGATGGTCAATTTCCTTCCTC-AATAAATTCAATTACATACTGTAATTATTTTTT---CATATATCTCCAATACTTC--AATTCACTTGGGAAACATTTTTACTTTTTCAACT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76349657 138 + 90941950 CTCTTTAATCCACCCCAAAACT--------------------GGGAGGGGTAGATGGTCAATTTCCTTCCTC-AATAAATTCAATTACatactgtaattatttttt---catatatctccAATACTTC--AATTCACTTGggaaacatttttactttttcaact i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18617513 138 + 33263144 CTCTTTAATCCACCCCAAAACT--------------------AGGAGGGGTAGATGGTCAATTTCCTTCCTC-AATAAATTCAATTACATACTGTAATTATTTTTT---CATATATCTCCAATACTTC--AATTCACTTGGGAAACATTTTTACTTTTTCAACT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198317483 140 + 210400635 CTCTTTAATCCACCCAATAATT--------------------GGGTGAGGGGGA-GGTCAATTTCCTTTCTCAAAAAAATTCAGTTACATATTGTAATTATGTTTT---CATATATCTCTAATACTGCAAAATTCACTTGGGAAACATTTTTACTTTTTCACCT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40941938 159 - 69331447 TTCTTTAATCTATTCCACAACCTTTGCTTTGTTAGGGGGCAGTGGGGGGGGGGATGGCCAGTTTTCTACCTT-GA-AACTTCTTTTATACATTATAATTGTTTTTTTCATATATATGTCTGATGCTTC--AACTT-CTTTGGAAATACTTTTGCTTTTCCATTT i canFam3.chr10 C 0 C 0 e mm10.chr15 77161503 0 + 104043685 C a score=1540503.000000 s hg38.chr22_KI270876v1_alt 169082 455 + 263666 -TTTTCCTCAAAGAATTTTACTTATGTTATAGTTACTAT-AATTCCCATACTTTGCTGGTTGTGGGTCAGAAATTTACTGTTCACAGATGTTTCTCATTGAAAGCACATTAATATTTACTTGTAAAAAGACCTGGTTCTAATCTAGTCTCATAACACTTCCAGCCTTAAGCTGTTACAAAGCCCAAGCTA--TTGTTTTATGTC-AGTAGA-GATACAGTTCATAGATAAGTGAAATCCACAAATATATCAAAACCTCATTATCGTAAAT----ATAA-----AATACTCTTAATTTGAATAATCCAAAATAACAGAAACA---GTTATATCAT-TAATATAAAACATATAATATAGACC--TCTATTAGAATATAGTTAAAGAGAAACATAATCACAGCCACTGCCATATGATTGCAATATTGATAGCTTTAGACTTGAATGAAAGCTGTAAGTTTACTC--CAGAGAGCTTACCCA s panTro4.chr22 34546973 455 + 49737984 -TTTTCCTCAAAGAATTTTACTTATGTTATAGTTACTAT-AATTCCTATACTTTGCTGGTTGTGGGTCAGAAATTTACTGTTCACAGATGTTTCTCATTGAAAGCACATTAATATTTACTTGTAAAAAGATCTGGTTCTAATCTAGTCTCATAACACTTCCAGCCTTAAGCGGTTACAAAGCCCAAGCTA--TTGTTTTATGTC-AGTAGA-GATATAGTTCATAGATAAGTGAAATCCACAAATATATCAAAACCTCATTATGGTAAAT----ATAA-----AATACTCTTAATTTGAATAATCCAAAATAACAGAAACA---GTTATATCAT-TAATATAAAACATATAATATAGACC--CCTATTAGAATATAGTTAAAGAGAAACATAATCACAGCCACTGCCATATGATTGCAATATTGATAGCTTTAGACTTGAATGAAAGCTGTAAGTTTACTC--CAGACAGCTTATCCA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30960643 451 + 46535552 -TTTTCCTCAAAGAATTTTACTTATGTTATAGTTACTAT-AATTCCCATACTTTGCTAGTTGTGGGTCAGAAATTTACTGTTCACAGATGTTTCTCATTGAAAGCACATTAATATTTACTTGTAAAAAGATCTGGTTCTAATCTAGTCTCATAACACTTCCAGCCTTAAGCTGTTACAAAGCCCAAGCTA--TTGTTTTATGTC-AG-------TATAGTTCATAGATAAGTGAAATCCACAAATATATCAAAACCTCATTATGGTAAAT----ATAA-----AATACTCTTAATTTGAATAATCCAAAATAACAGAAACA---GTTATATCAT-TAATATAAAACATATAATATAGACC--CCTATTAGAATATAGTTAAAGAGAAACATAATCACAGCCACTGCCATATGATTGCAATATTGATAGCTTTAGACTTGAATGAAAGCTGTAAGTTTACTCTTCAGAGAGCTTACCCA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100513160 455 - 115148730 -TTTTCCTCAAAGAATTTTACTTATGTTATAGTTACTAT-AATTCCCATACTTTGCTAGTTGTGGGTCAGAAATTTACTGTTCACAGATGTTTCTCATTGAAAGCACATTAATATTTACTTGTAAAAAGATCTGGTTCTAATCTAGTCTCGTAACACTTCCACCCTTAAGCTGTTACAAAGACCAAGCTA--TTGTTTCATGTC-AGTAGA-GATATAGTTCATAGATAAGGGAAATCCACAAATATATCAAAACCTCATTATGGTAAAT----ATAA-----AATACTCTTAATTTGAATAATCCAAAATAATAGAAACA---GTTATATCAT-TAATATAAAACATATAATATAGACC--CCTATTAGAATATGGTTAAAGAGAAACATAATCACAGCCACTGCCATATGATTGCAATATTGATACCTTTAGACTTGAATGAAAGCTGTAAGTTTACTA--CAGAGAGCTTACCCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80666213 450 + 95678458 -TTTTCCTGAAAGAATTGGACTTATGTTAGAGTTACTAT-AATTCCCAGACTTTGCTAGTTGTGGGTCAGAGATTTACTGTTCACAGACGTTTCTCATTGAAAGCACATTAATATTTACTTGTAAAAAGAT----TTCTAATCTAGTCTCATAACACTTCCAGCCTTAAGCTGTTACAAAGACCAAGCTA--TTG-TTTATGTC-AGTAGA-GATACAGTTCATAGATAAGCGAAATGCACACATATATCAAAACCTCATTATGGTAAGT----ATAA-----AATACTCTTAATTTGAATAATCCAAAATAACAGAA--A---GTTATATCAT-TAATATAAAACATATAATATAGATCAATGTATTAGAATATAGTTAAAGAGAAGCATAATCACAGCCACTGCCATATGATTGCACTACTGATAGCTTTTGACTTGAATGAAAGCTGTGAGTTTACTC--CAGAGAGCTTATTCA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81092309 450 - 96509753 -TTTTCCTGAAAGAATTGGACTTATGTTAGAGTTACTAT-AATTCCCAGACTTTGCTAGTTGTGGGTCAGAGATTTACTGTTCACAGACGTTTCTCATTGAAAGCACATTAATATTTACTTGTAAAAAGAT----TTCTAATCTAGTCTCATAACACTTCCAGCCTTAAGCTGTTACAAAGACCAAGCTA--TTG-TTTATGTC-AGTAGA-GATATAGTTCATAGATAAGCGAAATGCACACATATATCAAAACCTCATTATGGTAAGT----ATAA-----AATACTCTTAATTTGAATAATCCAAAATAACAGAA--A---GTTATATCAT-TAATATAAAACATATAATATAGATCAATGTATTAGAATATAGTTAAAGAGAAGCATAATCACAGCCACTGCCATATGATTGCACTACTGATAGCTTTCGACTTGAATGAAAGCTGTGAGTTTACTC--CAGAGAGCTTATTCA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76349795 451 + 90941950 -ttttcctgaAAGAATTGGACTTATGTTAGAGTTACTAT-AATTCCCAGACTTTGCTAGTTGTGGGTCAGAGATTTACTGTTCACAGACGTTTCTCATTGAAAGCACATTAATAATTACTTGTAAAAAGAT----TTCTAATCTAGTCTCATAACACTTCCAGCCTTAAGCTGTTACAAAGACCAAGCTA--TTGTTTTATGTC-AGTAGA-GATATAGTTCATAGATAAGCGAAATGCACACATATATCAAAACCTCATTATGGTAAGT----ATAA-----AATACTCTTAATTTGAATAATCCAAAATAACAGAA--A---GTTATATcat-taatataaaacatataatatagATCAATGTATTAGAATATAGTTAAAGAGAAGCATAATCACAGCCACTGCCATATGATTGCACTACTGATAGCTTTCGACTTGAATGAAAGCTGTGAGTTTACTC--CAGAGAGCTTATTCA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18617651 451 + 33263144 -TTTTCCTGAAAGAATTGGACTTATGTTAGAGTTACTAT-AATTCCCAGACTTTGCTAGTTGTGGGTCAGAGATTTACTGTTCACAGACGTTTCTCACTGAAAGCACATTAATATTTATTTGTAAAAAGAT----TTCTAATCTAGTCTCATAACACTTCCAGCCTTAAGCTGTTACAAAGACCAAGCTA--TTGTTTTATGTC-AGTAGA-GATATAGTTCATAGATAAGCGAAATGCACACATATATCAAAACCTCATTATGGTAAGT----ATAA-----AATACTCTTAATTTGAATAATCCAAAATAACAGAA--A---GTTATATCAT-TAATATAAAACATATAATATAGATCAATGTATTAGAATATAGTTAAAGAGAAGCATAATCACAGCCACTGCCATATGACTGCACTACTGATAGCTTTCGACTTGAATGAAAGCTGTGAGTTTACTC--CAGAGAGCTTATTCA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198317623 450 + 210400635 -TTTTCCTCGAAGAATTTTACTTAT-----AGTTATTAT-AATTCCCATACTTTACTAGCTGTGGTTCAGAAATTTACTGTTCACAGATGTTTCTCATTGAAAGCACATCAATATTTACTTAC-AAAATATCTGGTTCTATCCTACTCTCATAACACTTCCAGCCTTAAGCTGTTACAAAGACCAAGCTA--TTGTTTTATGTC-AGTAGATTATATAGTTCATAGATAAGTGAAATCCACAAATATATCAAAACCTCATTAT-GTAAATATAAATAA-----AATACTCTTAATTTGAATAATCTAAAATAATAGAAACA---GTTATATCGT-TAATATAAAAC-----ATATAGACCAATGTATCAGAATATAGTTAAAGAGAAGCATAATCACAGCCCCTGCCGTATGACTGCAATACTGATAGCTTTAGACATAAATGAAAGCTGTGTGTTTACTC--CAGAGAGCTTCCCCA i calJac3.chr1 C 0 C 0 s mm10.chr15 77161503 378 + 104043685 -TTTTCCACAGAG-----------TGATTTAGTGCTTGT-GGTTAC-------TGCTAG------------------CTGGTCACAGCTGGGACTTATC-AAGACACACCAGTATTTACTTGTAAGAAGATTGGCTTCTAGTCTAGTTTCCTGACACGTCCAGCCTTCGGCTGTAAGAAAGACCC-----------CTGATGTC-AGTAGA-GAAACAGTCCCCAGATAAACAAAGTCCATAAATGCTGC-AAACCTCAGCATGGCAAGT----GTGGTGTGCACTGCACTTTGGCTGAGAAATCAAAACCCATGGAA--G---GTTATGTACT-GTCCATAAAAC-----ACAGAGACCAACATGTCAGGACACAGCTAAGGAGA-------------CAATCTCTACAGGGTTCCAGGACTGGGGCCTCAAGGCCTGAACAAAA---GGGAGTTTACCC--G-------------- i mm10.chr15 C 0 I 24 s canFam3.chr10 40942097 451 - 69331447 TTTTTCGTCAGACAATTTTACTTATATGACTGTTACTACAAAGTCCCTTATTTTGCTAGTTGGGTCTCAGAAAAAAATTGTTCACAGATATTTCTCTTCAAAAGCACATCAATATTTAATGGTAAGAAGCTTTGTTTCTAATCTAAGCTCATGACACTTCCAGCTTTAAACTGCTATGTCAACCAGCCTATTTTGTTTTATGCCAAGTAGA-CATTGAGTCCACAAGTAAGTA----CCACAAATATATCAAAATTTCATTATGGTAAAT----GTAA-----TTTACTCTTCATCTAAGTAACTCAAAATAATGGAAACATGTAATATATAATAGAATCTAAAACATATAGTACGGATCACTATGTTAGAATACAGTTGA--AGAAATATAACCACAGCCCCTCCCATCTGACTTCAACACTGGTAGCATAAGACCTGAATGA---------GTTTACTC--CAGCAAGCTTACACA i canFam3.chr10 C 0 C 0 a score=262097.000000 s hg38.chr22_KI270876v1_alt 169537 74 + 263666 ------ACAGGCCCAATCCAAAATAGCTTGG----GCCTTTAGGCCCAAAATACCTAATAAGATGTACTAGTTAGTCCATTATT s panTro4.chr22 34547428 74 + 49737984 ------ACAGGCCCAATCCAAAATAGCTTGG----GCCTTTAGGCCCAAAATACCTAATAAGATGTACTAGTTAGTCCATTATT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30961094 74 + 46535552 ------ACAGGCTCAATCCAAAATAGCTCGG----GCCTTTAGGCCCAAAATACCTAATAAGATGTACTAGTTAGTCCATTATT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100513615 74 - 115148730 ------ACAGGCCCAATCCAAAATAGCTTGG----GCCTTTAGGCCCAAAATACCTAATAAGATGTACTACTTAGTCCATTATT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80666663 74 + 95678458 ------ACAGGCCCAATCCAAAATAGCTTGG----GCCTTTAAGCCCAAAATACCTAATAAGATGTACTAGTTAGTCCATTATT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81092759 74 - 96509753 ------ACAGGCCCAATCCAAAATAGCTTGG----GCCTTTAAGCCCAAAATACCTAATAAGATGTACTAGTTAGTCTATTATT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76350246 74 + 90941950 ------ACAGGCCCAATCCAAAATAGCTTGG----GCCTTTAAGCCCAaaatacctaataaaatgtaCTAGTTAgtccattatt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18618102 74 + 33263144 ------ACAGGCCCAATCCAAAATAGCTTGG----GCCTTTAAGCCCAAAATACCTAATAAGATGTACTAGTTAGTCCATTATT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198318073 78 + 210400635 ------ACAGGCCCAATCCAAAATAGCTTGGTTTAGCCTTTAGGCCCCAAATACCTACTAAGTTGTATTAGTTACTTCACTATT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40942548 84 - 69331447 ACAGGTCCAGGTCCAGTTAAAAATAGCCTGGTTTAGCCTTCAGGTCCACAATATCTAATAGGATATACTGGTTAGTTTGTCACT i canFam3.chr10 C 0 C 0 e mm10.chr15 77161881 24 + 104043685 I a score=998862.000000 s hg38.chr22_KI270876v1_alt 169611 298 + 263666 TCTTTTAACTCTATGCATTCCGGTCCAACCTGCAACATAGGTGCTAATTATTAGAGAAATGGCTATTTGAAAGAAAAAAATAATTAAAGGAACATGAAAAC------AAACTAAAACAAACTGACAGACCAAGTAGTATCTTTAATTCAGAATTAATTGTATTAACTGTATTTATTTTCTTATTCTAGGTTTCCATCAC--------AATATTTCAAAAAATCATGATAGctca-gaggtcatctggcccaactccttcattttatatacaacaaaactaaagtcaagaaaaattgaagttatttgagcatga s panTro4.chr22 34547502 295 + 49737984 TCTTTTAACTCTATGCATTCCGGTCCAACCTGCAACATAGGTGCTAATTATTAGAGAAATGGCTATTTGAAAGAAAAAAATAATTAAAGGAACATGAAAAC------AAACTAAAACAAACTGACAGACCAAGTAGTATCTTTAATTCAGAATTAATTGTATTAACTGTATTTATT---TTATTCTAGGTTTCCATCAC--------AATATTTCAAAAAATCATGATAGctca-gaggtcatctggcccaactccttcattttatatacaacaaaactaaagtcaagaaaaattgaagttatttgagcatga i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30961168 299 + 46535552 TCTTTTAACTCTATGCATTACGGTCCAACCTGCAACATAGGTGCTAATTATTAGAGAAATGGCTATTTGAAAGAAAAAAATAATTAAAGGAACATGAAAAC--AAATAAACTAAAACAAACTGACAGACCAAGTAGTATCTTTAATTCAGAATTAATTGTATTAACTGTATTTATTTTCTTATTCTAGGTTTCCATCAC--------AATATTTCAAAAAAGCATGATAGCTGAGgaggtcatctggccc-actccttcattttatatac-acaaaactaaagtca--gaaaattgaagttatttgAGTATGA i ponAbe2.chr22 C 0 I 399 s nomLeu3.chr7b 100513689 294 - 115148730 TCTTTTAACTCTATGCATTCCTGTCCAACCTGCAACATAGGTGCTAATTATTAGAGAAATGGCTATTTGAAAGAAAAAAA----TAAAGGAACATGAAAAC------AAACTAAAACAAACTGACAGACGAAGTAGTATCTTTAATTCAGAATTAATTGTATTAACTGTATTTATTTTCTTATTCTAGGTTTCCAACAC--------AATATTTCAAAAAATCATGATAGctga-gaggtcatctggcccaactccttcattttatatataacaaaactaaagtcaagaaaaattgaagttatttgagcatga i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80666737 304 + 95678458 TCTTTTAACTCTATGCATTCCCATCCAACCTGCAACTTAGGTGCTAATTATTAGATAAATGGCCATTTGAAAGAAAAAAACAATTAAAGGAACATGAAAACACAAATAAACTAAAACAAACTGACAGACCAAGTAGTATCTTTAATTCAGAATTAATTGTATTAACTGTTTTTCTTTTCTTATTCTAGGTTTCGATTAC--------AATATTTCAAAAAATCATGATAGctga-gaggtcatccggcccaactccttcattttaaatacaacaaaactaaagtcaagaaaaattgaagttatttgagcacga i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81092833 304 - 96509753 TCTTTTAACTCTATGCATTCCCGTCCAACCTGCAACTTAGGTGCTAATTATTAGATAAATGGCCATTTGaaagaaaaaaacaattaaaggaacatgaaaacacaaataaactaaaacaaactgacagaccaaGTAGTATCTTTAATTCAGAATTAATTGTATTAACTGTTTTTCTTTTCTTATTCTAGGTTTCGATTAC--------AATATTTCAAAAAATCATGATAGctga-gaggtcatccggcccaactccttcattttaaatacaacaaaactaaagtcaagaaaaattgaagttatttgagcacga i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76350320 304 + 90941950 tcttttaactCTATGCATTCCCGTCCAACCTGCAACTTAGGTGCTAATTATTAGATAAATGgccatttgaaagaaaaaaacaattaaaggaacatgaaaacacaaacaaactaaaacaaactGACAGACCAAGTAGTATCTTTAATTCAGAATTAATTGTattaactgtttttcttttcttattctagGTTTCGAttac--------aatatttcaaaaaatcatgATAGCTGA-GAGGTCATCCGGCCCAACTCCTTCATTTTAAATACAACAAAACTAAAGTCAAGAAAAATTGAAGTTATTTGAGCACGA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18618176 304 + 33263144 TCTTTTAACTCTATGCATTCCTGTCCAACCTGCAACTTAGGTGCTAATTATTAGATAAATGGCCATTTGaaagaaaaaaacaattaaaggaacatgaaaacacaaataaaccaaaacaaactgacagaccaaGTAGTATCTTTAATTCAGAATTAATTGTATTAACTGTTTTTCTTTTCTTATTCTAGGTTTCGATTAC--------AATATTTCAAAAAATCATGATAGctga-gaggtcatccggcccaactccttcattttaaatacaacaaaactaaagtcaagaaaaactgaagttatttgagcatga i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198318151 292 + 210400635 TCTTTTAACTCTATGCATTCCTGTCTAACCTGCAACTTAGGTACTAATTATTAGGGAAATGGCCATTTGAAAGAAAGAAATAATTAAAGAAACGTGAAAAC----ACAAACTACAACAAACTGACAGGCCAAGCAGTATCTTTAATTCAGAATTAATTGTATTAACTGTTTCTATTTTCTTATTCTAAGTTTCCATTAC--------AATATTTCAAACAGTCATgaaagctga-gagatcatctggcccaactccttc-------atacaagaaaactaaagtcaagaaaaa-tgaagttatttaagcatga i calJac3.chr1 C 0 C 0 s mm10.chr15 77161905 146 + 104043685 TCTGGTAACCCTGTGCATTTCTGCTCAACCCGCAACTTAGGTGTTAGGTACTAG---AATGGC---GTCAGAAAGGACAATAATT-AAGGATCATGGAA-------------------------------------CATCTGTAATTCAGAA------------------------------------------------------------TTCAAAAAATCA---------A------------------------------------------------------TAAAAATGAAGTTATGTGAGCATAG i mm10.chr15 I 24 C 0 s canFam3.chr10 40942632 305 - 69331447 TCCTTTAACCCTATGCCTTTCTGTCCAGCCTACAATTGAGGACCTAATTATTAGAGAAATGGCCATTTGAAAAAAAAAAAAAATT-AAGTGTCATGAGAACACAGATAAACCAAAATAAACTGAGAAAACAACTAGTATCTGTAATTGAGAATTAACTGTATTCACCATTTTTATTTTCCTATTC----TTTTCAGCACAACCAATTAACATTTCAAAGAATTGTGGCATATGA--agatcatttggtctaataccttcattttatatacaggaacaggaaagtcatgtaaaa-cgaagctatatgcatatga i canFam3.chr10 C 0 C 0 a score=473787.000000 s hg38.chr22_KI270876v1_alt 169909 161 + 263666 acatggtggtggttaac-tctattgctggaaccagaatccaggactcct-aacttcAATTTTTCT---TACTAT----------AA---------------GATATTCA------GAAATATGCTTGGCAATGACCTAACATTTTCTGATTCTAAATTTCAACAAGTTAACAAATAAGATGTTACTAATGTCATCAC s panTro4.chr22 34547797 161 + 49737984 acatggtggtggttaac-tctattgctggaaccagaatccaggactcct-aacttcAATTTTTCT---TATTAT----------AA---------------GATATTCA------GAAATATGCTTGGCAATGACCTAACATTTTCTGATTCTAGATTTCAACAAGTTAACAAATAAGATGTTACTAATCTCATCAC i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100513983 161 - 115148730 acatggtggtggctaac-tctattgctggaatcagaatccaggactcct-aacttcAATTTTTCT---TACTAT----------AA---------------GATATTCA------GAAATATGCTTGGTAATGACCTAACATTTTCTGATTCTAGATTTCAACAAATGAACAAATAAGATGTTACTAATCCCATTAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80667041 161 + 95678458 acatggtggtgtttaac-actattgctggaaccagaatccaggactcct-aacttcAATTTTTCT---TACTGT----------AA---------------GATATTCA------GAAATACGCTTGGTAATGACCTAACATTTTCCGATTCTAGACTGCAACAAGTTAACAAATAAGATGTCACTAATCCCATCAC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81093137 161 - 96509753 acatggtggtgtttaac-actattgctggaaccagaatccaggactcct-aacttcAATTTTTCT---TACTGT----------AA---------------GATATTCA------GAAATACGCTTGGTAATGACCTAACATTTTCCGATTCTAGACTGCAACAAGTTAACAAATAAGATGTCACTAATCCCATCAC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76350624 161 + 90941950 ACATGGTGGTGTTTAAC-ACTATTGCTGGAACCAGAATCCAGGACTCCT-AACTTCAATTTTTCT---TACTAT----------AA---------------GATATTCA------GAAATACGCTTGGTAATGACCTAACATTTTCCGATTCTAGACTGCAACAAGTTAACAAATAAGATGTCACTAATCCCATCAC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18618480 161 + 33263144 atatggtggtgtttaac-actattgctggaaccagaatccaggactcct-aacttcAATTTTTCT---TACTAT----------AA---------------GATATTCA------GAAATACGCTTGGTAATGACCTAACATTTTCCGATTCTAGACTGCAACAAGTTAATAAATAAGATGTCACTAATCCCATCAC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198318443 160 + 210400635 acatggtagtggttaac-actatagctggaaccagaatccaggactcct-aacctcaa-ttttct---tactct----------AA---------------GATATTCA------GAAATATGCTTGGTAATGACCTAACATTTTCTGATTCTAGATTTCAACAACTTAACAAATAAGAAGTTACTAATCCCATCAC i calJac3.chr1 C 0 C 0 s mm10.chr15 77162051 176 + 104043685 ---CTGTGTAGAATAACTACCCTAGCTGGAGCCAGAATCCAGGACGCTT---CTCCATTTATTCCCCATACTGTTGCCAATTGAAA---------------GGCACTTATACAATGTAATATGCTTTATAATGGCTTAACCTTTTCTGGTTCTGTATTTTAACAACTTAACAATGAAAATGTCACTAATTCTACCAC i mm10.chr15 C 0 C 0 s canFam3.chr10 40942937 175 - 69331447 ---cagaggtgg-tgac-actacagattgaatcagaatccagggttcttcaacttcATTCACTATAC-TACTAC----------TAACTTAAAGGCAAATCGATATTCA------GAAATATATTTGATAATGACTTAAAATTTTCTGATTCTAGACTTCAATAAGTTAATAACTAAAATACTATTTATCTCATTGC i canFam3.chr10 C 0 C 0 e ponAbe2.chr22 30961467 399 + 46535552 I a score=1490084.000000 s hg38.chr22_KI270876v1_alt 170070 460 + 263666 AAAATAGTCTAAAACGTTAGACTAA----------AAATAGTCTTAGTGGGGAAAGATGCCCTCTACTTTATATATTACCTTTCTGGAAAAT----ACAACATTTGGAAACTGCCAACTGTGCCTCTCATCTGCTCAAAACAAAGCCTAAAGTTTATCATAATATGATGGGTTTTTTACATTACATTTATATTGTCCAGCCCACCTGGTTCAAAacacacacacacacatacacacacaaacacacacacacacacacacacacacacacacacagacacaca---GAATCTCTCCAAAGTTTCAGAACTTCTAGGGGTG-AATGCCAACCACCTTTGTCTGGCCG-CCAATACTA-TAAA-TTAAATCCTCTTATTACAGTAAATTAGCAAAAAGCAC--TGGGAAAGCTAGGCTCTGAATGGTACCGGGTCAAAAGACAGAAAGCCTTGTAGGCATTTCATTCCACCATAAAGC-TTCACAT s panTro4.chr22 34547958 449 + 49737984 AAAATAGTCTAAAACGTTAGACTAA----------AAATAGTCTTAGTGGGGAAAGATACCCTCTACTTTATATATTACCTTTCTGGAAAAT----ACAACATTTGGAAACTGCCAACTGTGCCTCTCGTCTGCTCAAAACAAAGCCTAAAGTTTATTATAATATGATGGGTTTTTTACATTACATTTATATTGTCCAGCCCACCTGGTTCGAAacacacacacacacat----------acacacacacacaaacaaacacacacacacacacacacacaca---GAATCTCTCCAAAGTTTCAGAACTTCTAGGGGTG-AATGCCAACCACCTTTGTCTGGCCA-CCAATACTA-TAAA-TTAAATCCTCTTATTACAGTAAATTAGCAAAAAGCAC--TGGGAAAGCTAGGCTCTGAATGGTACCGGGTCAAAAGACAGAAAGCC-TGTAGGCACTTCATTCCACCATAAAGC-TTCACAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30961866 426 + 46535552 AAAATAGTCTAAAACGTTAGACTAA----------AAATAGTCTTAGTGGGGAAAGATGCCCTCTACTTTATATATTACCTTTCTGGAAAAT-ACAACAACATTTGGAAACTGCCATCTGTGCCTCTCGTCTGCTCAAAACAAAGCCTAAAGTTTATTACAATATGATGGTTTTTTTATGTTACATTTATATTGTCCGGCCCACCCGGTTCAAAacacacacacacacac------------------------------------acacacacacacacaca---caATCTCTCCAAAGTTTCAGAACTTCTAGGGGTG-AATGCCAACCACCTTTGTCTGGCCA-CCAATACTA-TAAA-TTAAATCCTCTTATTACAGTAAATTAGCAAAAAGCAC--TGGGAAAGCTAGGCTCTGAATGGTACCGGGTCAAAAGACAGAAAGCC-TGTAGGCATTTCATTCCACCATAAAGC-TTCACAT i ponAbe2.chr22 I 399 C 0 s nomLeu3.chr7b 100514144 438 - 115148730 AAAATCGTCTAAAATGTTAGACTAA----------AAATAGTCTTAGTGGGGAAAGATGCCCTCTACTTTATATATTACCTTTCTGGAAAAT----ACAACATTTGGAAACTGCCATCGGTACCTCTCGTTTGCTCAAAACAAAGCCTAAAGTTTATTATAATATGATGGTTTTTTAATGTTATATTTATATTGTCCAGCCTACCCGGTTCAAAacacacacacacacac--------------------acacacacacacacacacacacacacacacaca---GAATCTCTCCAAAGTTTCAGAACTTCTAGGGGTG-AATGCCAACCACCTTTGTCTGGCCA-CCAATACTA-TAAA-TTCAATCCTCTTATTACAGTAAATTAGCAAAAAGCAC--TGGGAAAGCTAGGCTCTGAATGGTATCCCGTC-AAAGACAGAAAGTC-TGTAGGCATTTCATTCCACCATAAAGC-TTCACAT i nomLeu3.chr7b C 0 M 6670 s rheMac3.chr10 80667202 436 + 95678458 AAAACAGTCTAAAACGTTAGACTAA----------AAATAGTCTTCGTGGGGAAAGATGCCCTCTACTTTATATATTACCTTTCTGGAAAAT-ACAACAACATTTGGAAACTGCCGTCTGTGCCTCTTATCTGCTCAAAACAAAGCCTAAAGTTTATTATAATATGCTGATTTTCTTATGTTACATTTATATTGTTCAGCCCACCCGGTTCAAAacacacacacacacac--------------------------acacacacacacacacacacacacaca---GAATCTCTCCAAAGTTTCAGAACTTCTAGGGGTG-AATGCCAACCACCTTTGTCTGGCCA-CCAATACTA-TAAA-TTCAATCCTCTTATTACAGTAAATTAGCAAAAAGCAT--TGGGAAAGCTAGGCCCTCAATGGTACCCGGTCAAAAGACAGAAAGCC-TGTAGGCATTTCACTCCACCGTAAAAC-TTCACAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81093298 436 - 96509753 AAAACAGTCTAAAACGTTAGACTAA----------AAATAGTCTTCGTGGGGAAAGATGCCCTCTACTTTATATATTACCTTTCTGGAAAAT-ACAACAACATTTGGAAACTGCCGTCTGTGCCTCTTATCTGCTCAAAACAAAGCCTAAAGTTTATTATAATATGCTGATTTTCTTATGTTACATTTATATTGTTCAGCCCACCCGGTTCAAAacacacacacacacac--------------------------acacacacacacacacatacacacaca---GAATCTCTCCAAAGTTTCAGAACTTCTAGGGGTG-AATGCCAACCACCTTTGTCTGGCCA-CCAATACTA-TAAA-TTCAATCCTCTTATTACAGTAAATTAGCAAAAAGCAT--TGGGAAAGCTAGGCCCTCAATGGTACCCGGTCAAAAGACAGAAAGCC-TGTAGGCATTTCACTCCACCGTAAAAC-TTCACAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76350785 436 + 90941950 AAAACAGTCTAAAATGTTAGACTAA----------AAATAGTCTTCGTGGGGAAAGATGCCCTCTACTTTATATATTATCTTTCTGGAAAAT-ACAACAACATTTGGAAACTGCCGTCTGTGCCTCTTGTCTGCTCAAAACAAAGCCTAAAGTTTATTATAATATGCTGATTTTCTTATGTTACATTTATATTGTTCAGCCCACCCggttcaaaacacacacacacacac--------------------------acacacacacacacacatacacacaca---gaatctCTCCAAGGTTTCAGAACTTCTAGGGGTG-AATGCCAACCACCTTTGTCTGGCCA-CCAATACCA-TAAA-TTCATTCCTCTTATTACAGTAAATTAGCAAAAAGCAT--TGGGAAAGCTAGGCCCTCAATGGTACCCGGTCAAAAGACAGAAAGCC-TGTAGGCATTTCACTCCACCATAAAAC-TTCACAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18618641 422 + 33263144 AAAACAGTCTAAAACGTTAGACTAA----------AAATAGTCTTCGTGGGGAAAGATGCCCTCTACTTTATATATTACCTTTCTGGAAAAT-ACAACAACATTTGGAAACTGCCGTCTGTGCCTCTTGTCTGCTCAAAACAAAGCCTAAAGTTTATTATAATATGCTGATTTTCTTATGTTACATTTATATTGTTCAGCCCACCCGGTTCAAAacacacacacacacac--------------------------acac--------------acacacaca---GAATCTCTCCAAAGTTTCAGAACGTCTAGGGGTG-AATGCCAACCACCTTTGTCTGGCCA-CCAATACTA-TAAA-TTCAATCCTCTTATTACAGTAAATTAGCAAAAAGCAT--TGGGAAAGCTAGGCCCTGAATGGTACCCGGTCAAAAGACAGAAAGCC-TGTAGGCATTTCACTCCACCATAAAAC-TTCACAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198318603 444 + 210400635 AAAATAGTCTAACATGTTAGACTAAAAATAGTCTGAAATAGTCTTAGTGGGGAAAGATGCCCTCTACTTTAGATATTATCTTTTTGGAAAAT-ACAGCAACATTTGGAAACTGCCATCTGTAACTCTCATCTGCTCAAAACAAAGCCTAAAGTTTATTATAATATGACAGTTTTGTTATGCGACATTTATATTGCCTAGCCCACCCTGTTCAAAacacacacacacacac--------------------------acacacacacgcacgcacgcacacacacGCGAATCTCTCCAAAGTTTCCGAACTTCTAGGATTG-AATGCCAACCACCTCTGTCTGGCTG-TCAATACTA-TAAA-TTCAAACCTCTTGCTACA-TAAATTAGCAAAAAGCAT--TGGGAAAGCTAGGCTCTGAATGGTACCCCGTCAAA----AGAAAGTT-TGTAGGCATCTAATTCCACCACAAAGC-TTCACAT i calJac3.chr1 C 0 C 0 s mm10.chr15 77162227 387 + 104043685 AGAATAATTGGAAATGGTAGGCTAAAACCAGATTAAAATAGTCTAGGCATGG----------CCTGATTTATGTATTACCTTTCTGAAAAAT-ACAGTTACATTTGGACACTGCCACCTGAACCTCTCAGTTGCCTCCAG-AGATCCTCAAGTTTATTCTATCATGGAGGCATGGTAAA--TACATTTATATTGCCCAGCCTAT-------------CGTGCACCCACAT-------------------------------------------------------------TCTCTGAAGCGTCAGAATTTCTAATACTGAAAAGCTAACCACTTCTGTCTAGTTATTCAACACTATTAAA-ATAAAATCTTTTGCTACAGCAAATTAGAAAAAAAAATTCTCGAGAAGTTCGGCCC--AAATGTACAATGTCACATGAGAGGAAACC-TGTA-----CTCATAAAATCATAAAATGTTCACGT i mm10.chr15 C 0 C 0 s canFam3.chr10 40943112 375 - 69331447 AAAATAGTCTAAAA--------TAA----------AA------------------------------------TATGACCTTTCTGAAAAAACATGGCAACATTTGGAAACCACCATTTGTGCTTCTCATCTGCTCAAAATGAAGCCTCAAGTTTACTGTAGGACAGTGACTTAGTTATGTTACATTTACAATGCCAAGCCCACT--GCTTAacacacacacacacacac----------------------------------------acacacacacaca----AATCTCTCTGAAACTTCAGAACGTCTAG--TTG-AAAGC-AACCTCTCCTGCCCAGCCC-TCAATACTA-TAAAGCTCAAAACTCCCGTTACAGCAAATTAGCAAAATACTA--TGAGAAATCTATGCCCTAAATGGTACCAGGTCAAAAGACAGAAAGCT-TATAAGCATTTCATCCCACCATAAAACCTTCACAT i canFam3.chr10 C 0 C 0 a score=1121037.000000 s hg38.chr22_KI270876v1_alt 170530 332 + 263666 AAATCAAACAGTATCTAGAAA--------TTATAACCCTTAGCTTACCTGGACAACAGGATATTGATAATCCATACAATATACACCATACATAGCAAAA-GGG---AAAAAATCTTCAGATAAGGACAGTACAAAAAGTGTCT-AAGTTTTTGCCTTGTTTGCGCTGGCTGTCCTGTCCAAAGGAACTAGGTAGCACC---------AAAAAAATCCTTCGCTGACCTCCAGTCTACGCAGATAGGTATGC-TGGCTCAGCTGATGAAGTCGGAGCTTGGTTGAGACCAGGCCTCCACCCCAACAGGATTTGACAATACACAGAAGAGATGTT----CA-GAAAAAAGCAAAAAGCT----TTG s panTro4.chr22 34548407 332 + 49737984 CAATCAAACAGTATCTAGAAA--------TTATAACCCTTAGCTTACCTGGACAACAGGATATTGATAATCCATACAATATACACCATACATAGCAAAA-GGG---AAAAAATCTTCAGATAAGGACAGTACAAAAAGTGTCT-AAGTTTTTGCCTTGTTTGCGCTGGCTGTCCTGTCCAAAGGAACTAGGTAGCACC---------AAAAAAATCCTTCGCTGACCTCCAGTCTACGCAGATAGGTATGC-TGGCTCAGCTGATGAAGTCGGAGCTTGGTTGAGACCAGGCCTCCACCCCAACAGGATTTGACAATACACAGAAGAGATGTT----CA-GAAAAAAGCAAAAAGCT----TTG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30962292 333 + 46535552 CAATCAAACAGTATCTAGAAA--------TTATAACCCTTAGCTTACCTGGACAACAGGATATTGATAATCCATACAATATACACCATACATAGCAAAA-GGG---AAAAAATCTTCAGATAAGGACAGTACAAAAAGTGTCT-AAGTTTTTGCCTTGTTTGAGCTGGCTGTCCTGTCCAAAGGAACTAGGCAGCACC---------AAAAAAATCCTTCGCTGACCTCCAGTCTACGCAGATAGGTATGCTTGGCTCAGCTGATGAAGTCGGAGCTTGGTTGAGACCAGGCCTCCACCCCAACAGGATTTGACAATACACAGAAGAGATGTT----CA-GAAAAAAGCAAAAAGCT----TTG i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80667638 332 + 95678458 CAATCAAACAGTATCTAGAAA--------TTATAACCCTTAGCTTACCTGGACAACAGGATATTGATAATCCATACAATATACACCATACATAGCAAAT-GGG---AAAAAATCTTCAGATAAGGACAGTACAAAAGGCGTCT-AAGTTTTTGCCTTGTTTGAGCTGGCTGTCCCGTCCAAAGGAACTAGGTAGCACC---------AAAAAAATCCTTCGCTGACCTCCAGTCTACGCAGATAGGTATGC-TGGCTCAGCTGATGAAGTCGGAGCTTGGTTGAGACCAGGCCTCCACCCCAATAGAATGTGACAATACACAGAAGAGATGTT----CA-GAAAAAAGCAGAAAGCT----TTG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81093734 332 - 96509753 CAATCAAACAGTATCTAGAAA--------TTATAACCCTTAGCTTACCTGGACAACAGGATATTGATAATCCATACAATATACACCATACATAGCAAAT-GGG---AAAAAATCTTCAGATAAGGACAGTACAAAAGGCGTCT-AAGTTTTTGCCTTGTTTGAGCTGGCTGTCCTGTCCAAAGGAACTAGGTAGCACC---------AAAAAAATCCTTCGCTGACCTCCAGTCTACGCAGATAGGTATGC-TGGCTCAGCTGATGAAGTCGGAGCTTGGTTGAGACCAGGCCTCCACCCCAATAGAATGTGACAATACACAGAAGAGATGTT----CA-GAAAAAAGCAGAAAGCT----TTG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76351221 333 + 90941950 CAATCAAACAGTATCTAGAAA--------TTATAACCCTTAGCTTACCTGGACAACAGGATATTGATAATCCATACAATATACACCATACATAGCAAAT-GGG---AAAAAATCTTCAGATAAGGACAGTACAAAAGGCGTCT-AAGTTTTTGCCTTGTTTGAGCTGGCTGTCCTGTCCAAAGGAGCTAGGTAGCACC--------aaaaaaaaTCCTTCGCTGACCTCCAGTCTACGCAGATAGGTATGC-TGGCTCAGCTGATGAAGTCGGAGCTTGGTTGAGACCAGGCCTCCACCCCAATAGAATGTGACAATACACAGAAGAGATGTT----CA-GAAAAAAGCAGAAAGCT----TTG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18619063 332 + 33263144 CAATCTAACAGTATCTAGAAA--------TTATAACCCTTAGCTTACCTGGACAACAGGATATTGATAATCCATACAATATACACCATACATAGCAAAT-GGG---AAAAAATCTTCAGATAAGGACAGTACAAAAGGCGTCT-AAGTTTTTGCCTTGTTTGAGCTGGCTGTCCTGTCCAAAGGAACTAGGTAGCACC---------AAAAAAATCCTTCGCTGACCTCCAGTCTACGCAGATAGGTATGC-TGGCTCAGCTGATGAAGTCGGAGCTTGGTTGAGACCAGGCCTCCACCCCAATAGAATTTGACAATACACAGAAGAGATGTT----CA-GAAAAAAGCAGAAAGCT----TTG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198319047 333 + 210400635 CAATCAAACATTATCTAGAAA--------TTATAACCCTTAGCTTACCTGGACAACAGGATATTGATAATCCATACAATATACACCATACATAGCAAAAGGGG---AAAAAATCTTCAGATAAGGACAGTACAAAAAGTGTCT-ACGTTTTTGCCTTGTTTGAGCTGGCTGTCCTGTCCAAAGGAGTTAAGTAGCACC---------AAAAAAATCCTTTGCTGACCTCCAGTCTACGCAAACAGGTATGC-TGGCTCAGCTGATGAAGTTGGAGCTTGGTTCAGACCAGGCCTCCACCCGAACAGAATGTGATAATACACAAAAGAGATGTT----CA-GGAAAAAGCAAAAAGCT----TTG i calJac3.chr1 C 0 C 0 s mm10.chr15 77162614 330 + 104043685 CAATCAAATATTGTTTGTAAA---ACGAGTCATAACCC--AGCTTACCTGGACAAGAGGATACTGATAATCCATGCAATATACACCATACATAGCAGAG-GGA---GAGA---CTCCAGATCTGGACGGCACAGAAAGCACCTCAAGTTTTTGTCTAGTCTGA----CGTGTCCTGTCCAAGGGAACTAGA-AGCACCTTCAAAAAAAAAAAATTCCCCCACT--TTCCCTGTCTACACAGACAGGTGTGC-TGGCTCAGCTGGTGAAGTCACAGGTTAGTTCAGAGC-------------AACAGGATTCAGTAGTACATACAAGAGATGTTAAAAAA-AAAAAAAGCAAAATATTCCAACTA i mm10.chr15 C 0 C 0 s canFam3.chr10 40943487 339 - 69331447 ----CAAACAGTACCTTAAAAAAAACAAGTTATAGCCCTTAGCTTACCTGGACAACAGGATATTGATAATCCATACAATATACACCATACATAGCAAAG-GGGAACAAAAAATCTTTGGATAAAGACAGTATCAAAAGTGTCT-ACACTTTTGCCCTGCTTGCTCTGGCTGTCCTGTCCAAAGGAACTAAGTAGCACC----------AAAAAATCTTTGGCTGACTCCCAGTCTATGCAGATAGGTATGC-TGGCTCAGATGATGAGGTTGGAGCCTGGTTCAGCCCAGGCTTCCACCCCAGTAAGATTCAAAACTACCCAGAAGAAATGTT----CAGGGAAAAAGCAAAAAGCT----CCA i canFam3.chr10 C 0 I 108 e nomLeu3.chr7b 100514582 6670 - 115148730 M a score=1163739.000000 s hg38.chr22_KI270876v1_alt 170862 373 + 263666 AGTTACTAGTTACAGACTGAAAACTACACTGGAGATTTGCTGTTACTGTTGGTTTTTAAATTGACAACTCAACCAGAAACTCAAGAGGCAGAGAATGACAGCCAGGGAAGGGAACACAGGCTCCTCACACTGGCACACAAACACGGTAGGAAGTCTAAGGTATCCAGGAGCCAAAATAATATATATGTTCCAGGCTTTAAGTGCGTC--AGAGAATACTCCCAATCCAGGACACAGAAAGGCAGATGGGACTGGTATTACTACTCTA-TTCTTTCTTGGGC-GGGGAGCATGTACCCGTGTGCACGCATGCGCATTCTCTGTCTCTCTCTCATacacacacacacacacacacac-acacacacacacacacacacCC s panTro4.chr22 34548739 373 + 49737984 AGTTACTAGTTACAGACTGTAAACTACACTGGAGATTTGCTGTTACTGTTGGTTTTTAAATTGACAACTCAACCAGAAACTCAAGAGGCAGAGAATGACAGCCAGGGAAGGGAACACAGGCTCCTCACACTGGCACACAAACACGGTAGGAAGTCTAAGGTATCCAGGAGCCAAAATAATATATATGTTCCAGGCTTTAAGTGCGTC--AGAGAATACTCCCAATCCAGGACACGGAAAGGCAGATGGGACTGGTATTACTACTCTA-TTCTTTCTTGGGC-GGGGAGCATGTACCCGTGTGCACGCATGCGCATTCTCTTTCTCTCTCTcatacacacacacacacacacacac-acacacacacacacacacacCC i panTro4.chr22 C 0 M 491 s ponAbe2.chr22 30962625 373 + 46535552 AGTTACTAGTTACAGACTGAAAACTACACTGGAGATTTGCTGTTACTGTTGGTTTTTAAATTGACAACTCAACCAGAAACTCAAGAGGCAGAGAATGACAGCCAGGGAAGGGAACACAGACTCCTCACACTGGCACACAAACACGGTAGGAAGTCTAAAGTATCCAGGAGCCAAAATAATATATATGTTCCAGGCTTTAAGTGCGTC--AGAGAATACTCCCAATCCAGGACACGGAAAGGCAGATGGGACTGGAATTACTACTCTA-TTCTTTCTTGGGC-GGGCAGCATGTACCCGTGTGCACGCATGCGCATTCTCTTTCTCTcatacacacacacatacacacacacacac-acacacacacacacacacacac i ponAbe2.chr22 C 0 I 6 s rheMac3.chr10 80667970 370 + 95678458 AGTTACTAGTTACAGACTGAAAACTACACTGGAGATTTGCTGTTACTGTCGGTTTTTAAATTGACAACTCAACCAGAAACTCAAGAGGCAGAGAATGACAGCCAGGGAAGGGAACACAGGTTCCTCACACTGGCACACAAACACGGTAGGAAGTCTAAGGTATCCAAGAACCAAAATAATATATATGTTCCGGGCTTTAAGTGCGTC--AGAGAATACTCCCAATCCAGGACACGGAAAGGCAGATGGGACTGGTATTACTACTCTA-TTCTTTCTTGGGCAGGGGGGCATGTACCCGTGTGCACGCATGCGCATTCTCTCTCTCTcat----acacacacacacacacacacac-acacacacacacacacacCCCC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81094066 372 - 96509753 AGTTACTAGTTACAGACTGAAAACTACACTGGAGATTTGCTGTTACTGTCGGTTTTTAAATTGACAACTCAACCAGAAACTCAAGAGGCAGAGAATGACAGCCAGGGAAGGGAACACAGGTTCCTCACACTGGCACACAAACACGGTAGGAAGTCTAAGGTATCCAAGAGCCAAAATAATATATATGTTCCGGGCTTTAAGTGCGTC--AGAGAATACTCCCAATCCAGGACACGGAAAGGCAGATGGGACTGGTATTACTACTCTA-TTCTTTCTTGGGCAGGGGGGCATGTACCCGTGTGCACGCATGCGCATTCTCTCTCTCTCAT--acacacacacacacacacacacac-acacacacacacacacacacCC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76351554 362 + 90941950 AGTTACTAGTTACAGACTGAAAACTACACTGGAGATTTGCTGTTACTGTTGGTTTTTAAATTGACAACTCAACCAGAAACTCAAGAGGCAGAGAATGACAGCCAGGGAAGGGAACACAGGCTCCTTACACTGGCACACAAACACGGTAGGAAGTCTAAGGTATCCAGGagccaaaataatatatatgttccGGGCTTTAAGTGCGTC--AGAGAATACTCCCAATCCAGGACACGGAAAGGCAGATGGGACTGGTATTACTACTCTA-TTCTTTCTTGGGCAGGGGGGCATGTACCCGTGTGCACGCATgcgcattctctctctctctt------------atacacacacacac-acacacacacacacccacaccc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18619395 354 + 33263144 AGTTACTAGTTACAGACTGAAAACTACACTGGAGATTTGCTGTTACTGTTGGTTTTTAAATTGACAACTCAACCAGAAACTCAAGAGGCAGAGAATGACAGCCAGGGAAGGGAACACAGGCTCCTCACACTGGCACACAAACACGGTAGGAAGTCTAAGGTATCCAGGAGCCAAAATAATATATATGTTCCGGGCTTTAAGTGCGTC--AGAGAATACTCCCAATCCAGGACACGGAAAGGCAGATGGGACTGGTATTACTACTCTA-TTCTTTCTTGGGCAGGGGGGCATGTACCCGTGTGCACGCATGCGCATTCTCTCTCTCTCAT--------------------acacac-acacacacacacacacacacCC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198319380 363 + 210400635 AGTTACTAGTTGCAGACTGAAAACTACACTGAAGATTTGCTTTTGCTGTTGG-TTTTAAATTGACAACTCAACCAGAAACTCAAGAGGCAGGGAATGACAGCCAGGGAAGAGAACACAGGCTCCTCACACTGGCACACAAACACAGTAGGAAGTATAAGGTATCCAGGAGCCAAAATAGTATATATGTTCCAGGCTTTAAGTGCGTC--AGAGAACAGTCCCAATCCAGGACATGGAAAGGCAGATGGGACTGGTATTACTTCTTTA-TTCTTTCTTGGGC-GGGGAGCGTGTACCCGTGTGCACGCAAGCGCATTCTCTCTCTc----------atacacacgcacacacacactacacacacactctcacacacCC i calJac3.chr1 C 0 C 0 s mm10.chr15 77162944 320 + 104043685 AGTTAGCTG-TACACGCTAAAGACAGTGCTAGGGATTAG--------------TTTTTAACTGACAGCTCCACCAGAAAGGCAAGAGGCAGAAGATGATAGCCAGGGAAGAGGCCTCTGGCTCCTTAAA---GCA-ACAAACAAGGGCAGAAGTGCAAGGCATCCA-GAGCTGAAGTGCTATA-ACGTCCCAGGCT----GTGTGTCAAAGGGAAAGCTCCCAGCCTAGGACATTG-GAGGCAAATGGGACT-GTATTATTTTTCTAGCCCTCCCTTGGGCAGGAATGCGCATGCGCATGCGCATGcatac------------------------------acacacacacacac-acacacacacacacacacacCC i mm10.chr15 C 0 I 4 s canFam3.chr10 40943934 354 - 69331447 AGCTTTCAGTTACAGACTGAAAGCTATACTAGAGACTTGCTATTACTGTTGG-TTTTAAACTGACAACTCCACCAAAAACTCAAGAGGCAAAGAATCACAGCCAGGGAAAAGAACACAGGCTCCTTAAAGTGGCAAACAAAAATGGTAGGAAGCACAAGGTATCCAGGAT----AAGGATATATATGTTCCAGGCTTTAAGTGCGTCAGAGAGAACACTCCCAATCCAGGACATGGAAAGGCAGATGGGACTGGTATTATTTCTCTA-TTCCTTCTTGGGCAGGATGG--TGCGcacgcgcacacgcacgcacataca---------------acacacacacacacacacacac-acacacacacacacacacacCC i canFam3.chr10 I 108 C 0 e nomLeu3.chr7b 100514582 6670 - 115148730 M a score=128867.000000 s hg38.chr22_KI270876v1_alt 171235 42 + 263666 TTCTCACTGTCTCCGGCAGAGACAGGTGTTAGGATTAACAGT s ponAbe2.chr22 30963004 42 + 46535552 TTCTCACTGTCTCCGGCAGAGACAGGTGTTAGGATTAACAGT i ponAbe2.chr22 I 6 C 0 s rheMac3.chr10 80668340 42 + 95678458 TTCTCACTGTCTCCAGCAGAGACAGGTGTTAGGATTAACAGT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81094438 42 - 96509753 TTCTCACTGTCTCCAGCAGAGACAGGTGTTAGGATTAACAGT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76351916 42 + 90941950 ttCTCACTGTCTCCAGCAGAGACAGGTGTTAGGATTAACAGT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18619749 42 + 33263144 TTCTCACTGTCTCCAGCAGAGACAGGTGTTAGGATTAACAGT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198319743 42 + 210400635 TTCTCACTGTCTTCGGCAGAGACAGGTGTTAGGATTAACAGT i calJac3.chr1 C 0 C 0 s mm10.chr15 77163268 42 + 104043685 TTCTTACTGTCTCCGGTGGAGACAGGTGTTAGGATTAACAGC i mm10.chr15 I 4 C 0 s canFam3.chr10 40944288 39 - 69331447 ---CTTCTGTCTCCGGCAGAGACAGGTGCTAGGATTAACAGT i canFam3.chr10 C 0 C 0 e panTro4.chr22 34549112 491 + 49737984 M e nomLeu3.chr7b 100514582 6670 - 115148730 M a score=1291748.000000 s hg38.chr22_KI270876v1_alt 171277 349 + 263666 ATAAAACCTTTCTGCCACGGAAAG-GAATGG-------------GAGAAAA---AAGTCACACTGATACACGCAGTAAGGGGATCCCTTTCATGACACTGTATGTTTTTGTATCATTTAACAC----CTCCCTCGCTGTGCTTTAACAGAGGTTAGGACAGCTGGCAGGATCAGCACTAGAAAAGAAGAAAGTGG-CCCCAACTCTGAGGCAACATGAGTCCACTGGAGGCCTCCAGATATGCAGGGTACACTTGCTCAGCTGTTCCAGTCAAACTTGGAAGGATTAACTCCGGCTGTCTGC-AAAAAGGTGGGGGTGGAAAGGTCTTTTCAGAAAAGCCAGTTGCTTTTCTCCTTTTAGGGAGCTGCTATA s panTro4.chr22 34549603 350 + 49737984 ATAAAACCTTTCTGCCACGGAAACCGTTTGG-------------GAGAAAA---AAGTCACACTGATACACGCAGTAAGGGGATCCCTTTCATGACACTGTATGTTTTTGTATCATTTAACAC----CTCCCTCGCTGTGCTTTAACAGAGGCTAGGACAGCTGGCAGGATCAGCACTAGAAAAGAAGAAAGTGG-CCCCAACTCTGAGGCAACATGAGTCCACTGGAGGCCTCCAGATATGCAGGGTACACTTGCTCAGCTGTTCCAGTCAAACTTGGAAGGATTAACTCCGGCTGTCTGC-AAAAAGGTGGGGGTGGAAAGGTCTTTTCAGAAAAGCCAGTTGCTTTTCTCCTTTTAGGGAGCTGCTATA i panTro4.chr22 M 491 C 0 s ponAbe2.chr22 30963046 349 + 46535552 ATAAAACCTTTCTGCCACAGAAAG-GAATGG-------------GAGAAAA---AAGTCACACTGATACATGCAGTAAAGGGATCCCTTTCATGACACTGTATGTTTTTGTATCATTTAACAC----CTCCCTCGCTGTGCTTTAACAGAGGCTAGGACAGCTGGCAGGATCAGCACTAGAAAAGAAGAAAGTGG-CCCCAACTCTGAGGCAACATGAGTCCACTGGAGGCCTCCAGATATGCAGGGTACACTTGCTCAGCTGTTCCAGTCAAACTTGGAAGGATTAACTCCGGCTGTCTGC-AAAAAGGTGGGGGTGGAAAGGTCTTTTCAGAAAAGCCAGTTGCTTTTCTCCTTTTAGGGAGCTGCTATA i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80668382 349 + 95678458 ATAAAACCTTTCTGCTACGGAAAG-GAATGG-------------GAGAAAA---AAGTCACACTGATACATGCAGTAAAGGGATCCCTTTCACGACACTGTATGTTTTTGTATCATTTAACAC----CTCCCTCGCTGTGCTTTAACAGAGGCTAGGACAGCTGGCAGGATCAGCACTAGAAAAGAAGAAAGTGG-CCCCAACTCTGAGGCAACATGAGTCCACTGGAGGCCTCCAGATATGCAGGGTGCACTTGCTCAGCTGTTCCAGTCAAACTTGGAAGGATTAACTCCGGCTGTCTGC-AAAAAGGTGGGGGTGGAAAGGTCTTTTCAGAAAAGCCAGTTGCTTTTCTCCTTTTAGGGAGCTGCTATA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81094480 349 - 96509753 ATAAAACCTTTCTGCTACGGAAAG-GAATGG-------------GAGAAAA---AAGTCACACTGATACATGCAGTAAAGGGATCCCTTTCACGACACTGTATGTTTTTGTATCATTTAACAC----CTCCCTCGCTGTGCTTTAACAGAGGCTAGGACAGCTGGCAGGATCAGCACTAGAAAAGAAGAAAGTGG-CCCCAACTCTGAGGCAACATGAGTCCACTGGAGGCCTCCAGATATGCAGGGTGCACTTGCTCAGCTGTTCCAGTCAAACTTGGAAGGATTAACTCCGGCTGTCTGC-AAAAAGGTGGGGGTGGAAAGGTCTTTTCAGAAAAGCCAGTTGCTTTTCTCCTTTTAGGGAGCTGCTATA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76351958 349 + 90941950 ATAAAACCTTTCTGCTACGGaaag-gaatgg-------------gagaaaa---aagtCACACTGATACATGCAGTAAAGGGATCCCTTTCATGACACTGTATGTTTTTGTATCATTTAACAC----CTCCCTCGCTGTGCTTTAACAGAGGCTAGGACAGCTGGCAGGATCAgcactggaaaagaagaaagtgg-cCCCAACTCTGAGGCAACATGAGTCCACTGGAGGCCTCCAGATATGCAGGGTGCACTTGCTCAGCTGTTCCAGTCAAACTTGGAAGGATTAACTCCGGCTGTCTGC-AAAAAGGTGGGGGTGGAAAGGTCTTTTCAGAAAAGCCAGTTGCTTTTCTCCTTTTAGGGAGCTGCTATA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18619791 349 + 33263144 ATAAAACCTTTCTGCTACGGAAAG-GAATGG-------------GAGAAAA---AAGTCACACTGATACATGCAGTAAAGGGATCCCTTTCATGACACTGTATGTTTTTGTATCATTTAACAC----CTCCCTCGCTGTGCTTTAACAGAGGCTAGGACAGCTGGCAGGATCAGCACTAGAAAAGAAGAAAGTGG-CCCCAACTCTGAGGCAACATGAGTCCACTGGAGGCCTCCAGATATGCAGGGTGCACTTGCTCAGCTGTTCCAGTCAAACTTGGAAGGATTAACTCCGGCTGTCTGC-AAAAAGGTGGGGGTGGAAAGGTCTTTTCAGAAAAGCCAGTTGCTTTTCTCCTTTTAGGGAGCTGCTATA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198319785 350 + 210400635 ATAAAACCCTTCTGCCATGGAAAG-GAATGG-------------AAGAAAA---AAGTCACACTGATACATGCAGTAAAGGGATCCCTTTCATGGCACTGTACGTTTTTGTATCATTTAACAC----CTCCCTCACTGTGCTTTAACAGAGGCTAGGACAGCTGGCAGGATCAGCACTAGAAAAGAAGAAGGTGGCCCCCAACTCTGAGGCAACATGAGTCCACTGGAGGCCTCCAGATATGCAGGGTACACTTGCTCAGCTGTTCCAGTCAAACTTGGAAGGATTAACTCCAGCTGTCTGC-AAAAAGGTGGGGGTGGAAAGGTCTTTTCAGAAAAGCCAGTTGCTTTTCTCCTTTTAGGAAGCTGCTATA i calJac3.chr1 C 0 C 0 s mm10.chr15 77163310 353 + 104043685 ATAAAACC---CAGCCATAGAAAG-AACTGGCaaaaaaaaaaaaaaaaaaa---aaGTCACACTGATACATGTAGAAAAGGGA-CCCTTTCATGACACTGTATGTTTCTGTATCATTTAACACACAGCTCCCTCC---TGCTTTAACAGGAGCGAGGACAGCTGGCAGGATCAG--CTAGAAAAGAGGAAGGTGG-CCCCAACTCTGA-GCAACATGAGTACATTGGAGGCCTGCAAATATGCGGGGCGTGCT--CTCAGCTGTTCCAGTCAAACTTGGAGGGATTAACTGTGGCTGCCTGT-GAAGAGGTGGGGGTGGAGAGGTCGCCACAGAGAAG-CAGTTGCTTTTCTCCTTTTAGGAAGCGGCTTTC i mm10.chr15 C 0 C 0 s canFam3.chr10 40944327 351 - 69331447 ATAAAACCCCTCTGTCGTGGAAAG-GAATGG-------------GAGAAAAAAGAAGTCACACTGCTACATGCAGTAAAGGGATCCCTTTCATGACAGCGTATGTTTGTGTATCATTTAACAC----CTCCTTCACTATGCTTTAACAGAGGCTGGGACAGCTGGCAGGATCAGGACTAGAAAAGAGGAAGGTGG-CCCCAACTCTGAGGCAACATGAGTCGACTGGAGACCTTAAGATATGCAAG--ACACTCTCTCAGCTGTTCCAATCAAACATGTAAGGATTAACTCCGGCTGCTTCCAAAAAAAGTGGGGGTGGAAAGGTTTTTTCAGAAAAGCCAGTTGCTTTTCCTCTTTTAGGAAGCTGCTATA i canFam3.chr10 C 0 C 0 e nomLeu3.chr7b 100514582 6670 - 115148730 M a score=2603406.000000 s hg38.chr22_KI270876v1_alt 171626 705 + 263666 CCCACCCTGCCATTATATACAAATACACATGTGCAC----------------------ACATATTTCTATAACAGATATTAAAAGCAGTAACAAACATGGACAGGTGTTAGGTTTGTCTGACAAAGCACAATAGGTTCAAGAGTTGGCTTTCAG-AGCCTAAATGGCCCATCAAAAATCAGAAAACTGCTAAGTAATCCTTAGAAAA-AGGACACAGAG-TGAGCAGAAAGTGAAAATTAATGTTTATTAAAAGACAAACCAGTTGTAACTATTGATCCTACGAAATCTTCTATTTGGAACAAGCATTCAAAATTTCAAAATGGTAAATAATTCTAAATAAGTTTCAGGGGCTATGACGTCCCTAATCG-----TGGAGAGCCAGTAATATTGTAACATGCTTTTGGATGATTAAACC-ATGAGGATTAAATGCAACTGTGAGGGCATCTGTGAGAATTTAAGTATTACCATGCCCTCCATGCCCCGC-CCCCATCAGTGTAATTCTTCTCCTTTTACGGTCACTGTAATTTATTTTAGGATTGTTCAGAAGAAACAG-ATTTTTAAGAGTCAAAATGGCTATAGCATATTTT--GATGGTATTCTTGGTTAAACATTTACCTGAACTCAGTTCTAACAGATTAGGAGGAC---CACTATACTC---------------------------GATTATCTTCAATTTGCTGGTA--CTGATTCTATGTG---------------CATTACACATGAAGAA--CAAGAATAAATCTATTCAGTATAATTAA s panTro4.chr22 34549953 705 + 49737984 CCCACCCTGCCATTATATACAAATACACATGTGCAC----------------------ACATATTTCTATAACAGATATTAAAAGCAGTAACAAATATGGACAGGTGTTAGGTTTGTCTGACAAAGCACAATAGGTTCAAGAGTTGGCTTTCAG-AGCCTAAATGGCCCATCAAAAATCAGAAAACTGCTAAGTAATCCTTAGAAAA-AGGACACAGAG-TGAGCAGAAAGTGAAAATAAATGTTTATTAAAAGACAAACCAGTTGTAACTATTGATCCTACGAAATCTTCTATTTGGAACAAGCATTCAAAATTTCAAAATGGTAAATAATTCTAAATAAGTTTCAGGGGCTATGACGTCCCTAATCG-----TGGAGAGCCAGTAATATTGTAACATGCTTTTGGATGATTAAACC-ATGAGGATTAAATGCAACTGTGAGGGCATCTGTGAGAATTTAAGTATTACCATGCCCTCCATGCCCCGC-CCCCATCAGTGTAATTCTTCTCCTTTTATGGTCACTGTAATTTATTTTAGGATTGTTCAGAAGAAACAG-ATTTTTAAGAGTCAAAATGGCTATAGCATATTTT--GATGGTATTCTTGGTTAAACATTTACCTGAACTCAGTTCTAACAGATTAGGAGGAC---CACTATACTC---------------------------GATTATCTTAAATTTGCTGGTA--CTGATTCTATGTG---------------CATTACACATGAAGAA--CAAGAATAAATCTATTCAGTATAATTAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30963395 701 + 46535552 CCCACCCTGCCATTATATACAAATACACATGTGCAC----------------------ACATATTTCTATAACAGATATTAAAAGCAGTAACAAACATGGACAGGTGTTAGGTTTGTCTGACAAAGCACAATAGGTTCAAGAGTTGGCTTTCAG-AGCCTAAATGGCCCATCAAAAATCAGAAAACTGCTAAGTAATCCTTAGAAAA-AGGACATAGAG-TGAGCAGAAAGTGAAAATAAATGTTTATTAAAAGACAAACCAGTTGTAACTATTGATCCTACGAAATCTTCTATTTGGAACAAGCATTCAAAAGTTCAAAATGGTAAATAATTCTAAATAAGTTTCAGGGGCTATGACGTCCCTAATCT-----TGGAGAGCCAGTAATACTGTAACATGCTTTTGGATGATTAAACC-ATGAGGATTAAATGCAACTGTGAGGGCATCTGTGAGAATTTAAGTATTACCATGCCCTCCATGCCCCGC-CCCCTTCAGTGTTATTCTTCTCCTTTTATGGTCACTGTCATTTATTTTAGGATTGTTCAGAAGAAACAG-ATTTTTAAGAGTCAAAATGGCTATAGCACATTTT--GATGTTATTCTTGGTTAAACATTTACCTGAACTCAGTTCTAACAGATTAGGAGGAC---CACTATACTC---------------------------GATTATCTTCAATTTGCTGGTA--CTGATTCTATGTG---------------CATGACACATGAAGAA--CAAGAATAAatctattcagta----taa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100521252 703 - 115148730 CCCACACTACCATTATATACAAATACACATGTGCAC----------------------ACATATTTCTATAACAGATATTAAAAGCAGTAACAAACATGGACAGGTGTTA-GTTTGTCTGACAAAGCACAATAGGTTCAAGAGTTGGCTTTCAG-AGCCTAAATGGCCCATTTAAAATCAGAAAACTGGTAAGTAATCCTTAGAACA-AGGACATAGAG-TGAGCAGAAAGTGAAAATAAATGTTTATTAAAAGACAAACCAGTTGTAACTATTGATCCTACGAAATCTTCTATTTGGAACAAGCATTCAAAAGTTCAAAATGGTAAATTATTCTAAATAAGTTTCAGGGGCTATGACGTCCCTAATCT-----TGGAGAGCCAGTAATATTGTAACATGCTTTTGGATGATTAAACT-ATGAGGATTAAATGCAACTGTGAGGGCATCTGTGAGAATTTAAGAATTACCAT-CCCTCCACGCCCCGC-CCCCATCAGTGTAATTCTTCTCCTTTTATGGTCACTGTAATTTATTTTAGGATTGTTCAGAAGGAACAG-ACTTTTAAGAGTCAAAATGGCTATAGCACATTTT--GAAGGTATTCCTGGTTAAACATTTACCTGAACTCAGTTCTAACAGATTAGGAGGAC---CACTGTACTC---------------------------GATTATCTTCAATTTGCTGGTA--CTGATTCTATGTG---------------CATTACACATGAAGAA--CAAGAATAAATCTATTCAGTATAATTAA i nomLeu3.chr7b M 6670 C 0 s rheMac3.chr10 80668731 706 + 95678458 CCCACCCTACCATTATATACAAACACACATGTGCAC----------------------ACATATTTCTCTAACAGATATTAAAAGCAGTAACAAACATGGACAGGTGTTAGGTTTGTCTGACAAAGCACAATAGGTTAAAGAGTTGGCCTTCAG-AGCCTAAATGGCCCACCTAAAATCAGATAACTGCTAAGTAATTCTTAGAAAA-AGGACATAGAG-TGAGCAGACAGTGAAAATAAATGTTTACTAAAAGACAAACCAGTTACAACTATTGATCCCACGAAATCTTCTATTTGGGACAAGCATTCAAAAGTTCAAAATGGTAAATAATTCTAAATAAGTTTCAGGGGCTACGATGCCCCTAATCT-----TGGTGAGCCAGTAATATTGTAACATGCTTCTGGATGATTAAACC-ATGAGGATTAAACGCAACTGTGAGGGCATCTGTGAGAATTTAAGTATTACCATGCCATCCACACCCCCCGCCCCATCAGTGTAATTCTTCTCCTTTTATGGTCAATGTAATTTATTTTAGGATTGTTCAGAAGAAACAG-ATTTTTAAGAGTCAAAATGGCTTTAGCACATTTT--GATGGTATTCTTGGTTAAACATTTACCTGAACTCAGTTCTAACAGATTAGGAGGAC---CACTATACTC---------------------------GATTATCTTCAATTTGCTGGTA--TTGATTGTATGTG---------------CATTACACATGAAGAA--TAAGAATAAATCTattcagtacaattaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81094829 706 - 96509753 CCCACCCTACCATTATATACAAACACACATGTGCAC----------------------ACATATTTCTCTAACAGATATTAAAAGCAGTAACAAACATAGACAGGTGTTAGGTTTGTCTGACAAAGCACAATAGGTTAAAGAGTTGGCCTTCAG-AGCCTAAATGGCCCACCTAAAATCAGATAACTGCTAAGTAATTCTTAGAAAA-AGGACATAGAG-TGAGCAGACAGTGAAAATAAATGTTTACTAAAAGACAAACCAGTTACAACTATTGATCCCATGAAATCTTCTATTTGGGACAAGCATTCAAAAGTTCAAAATGGTAAATAATTCTAAATAAGTTTCAGGGGCTACGATGCCCCTAATCT-----TGGTGAGCCAGTAATATTGCAACATGCTTCTGGATGATTAAACC-ATGAGGATTAAACGCAACTGTGAGGGCATCTGTGAGAATTTAAGTATTACCATGCCATCCACACCCCCCGCCCCATCAGTGTAATTCTTCTCCTTTTATGGTCAATGTAATTTATTTTAGGATTGTTCAGAAGAAACAG-ATTTTTAAGAGTCAAAATGGCTTTAGCACATTTT--GATGGTATTCTTGGTTAAACATTTACCTGAACTCAGTTCTAACAGATTAGGAGGAC---CACTATACTC---------------------------GATTATCTTCAATTTGCTGGTA--TTGATTCTATGTG---------------CATTACACATGAAGAA--TAAGAATAAATCTattcagtacaattaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76352307 704 + 90941950 CCCACCCTACCattatatacaaacacacatgtgcac----------------------acatatttCTCTAACAGATATTAAAAGCAGTAACAAACATGGACAGGTGTTAGGTTTGTCTGACAAAGCACAATAGGTTAAAGAGTTGGCCTTCAG-AGCCTAAATGGCCCACCTAAAATCAGATAACTGCTAAGTAATTCTTAGAAAA-AGGACATAGAG-TGAGCAGacagtgaaaataaatgtttactaaaaG--AAACCAGTTACAACTATTGATCCCACGAAATCTTCTATTTGGGACAAGCATTCAAAAGTTCAAAATGGTAAATAATTCTAAATAAGTTTCAGGGGCTACGATGCCCCTAATCT-----TGGTGAGCCAGTAATATTGTAACATGCTTCTGGATGATTAAACC-ATGAGGATTAAACGCAACTGTGAGGGCATCTGTGAGAATTTAAGTATTACCATGCCATCCACACCCCCCGCCCCATCAGTGTAATTCTTCTCCTTTTATGgtcaatgtaatttattttaggattgttcagaagaaacag-atttttaagaGTCAAAATGGCTTTAGCACATTTT--GATGGTATTCTTGGTTAAACATTTACCTGAACTCAGTTCTAACAGATTAGGAGGAC---CACTATACTC---------------------------GATTATCTTCAATTTGCTGGTA--TTGATTCTATGTG---------------CATTACACATGAAGAA--TAAGAATAAATCTATTCAGTACAATTAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18620140 706 + 33263144 CCCACCCTACCATTATATACAAACACACATGTGCAC----------------------ACATATTTCTATAACAGATATTAAAAGCAGTAACAAACATGGACAGGTGTGAGGTTTGTCTGACAAAGCACAATAGGTTAAAGAGTTGGCCTTCAG-AGCCTAAATGGCCCACCTAAAATCAGAGAACTGCGAAGTAATTCTTAGAAAA-AGGACATAGAG-TGAGCAGACAGTGAAAATAAATGTTTACTAAAACACAAACCAGTTACAACTATTGATCCCACGAAATCTTCTATTTGGGACAAGCATTCAAAAGTTCAAAATGGTAAATAATTCTAAATAAGTTTCAGGGGCTACGATGCCCCTAATCT-----TGGAGAGCCAGTAATATTGTAACATGCTTCTGGATGATTAAACC-ATGAGGATTAAACGCAACTGTGAGGGCATCTGTGAGAATTTAAGTATTACCATGCCATCCACACCCCCCGCCCCATCAGTGTAATTCTTCTCCTTTTATGGTCAATGTACTTTATTTTAGGATTGTTCAGAAGAAACAG-ATTTTTAAGAGTCAAAATGGCTTTAGCACATTTT--GATGGTATTCTTGGTTAAACATTTACCTGAACTCAGTTCTAACAGATTAGGAGGAC---CACTATACTC---------------------------GATTATCTTCAATTTGCTGGTA--TTGATTCTATGTG---------------CATTACACATGAAGAA--TAAGAATAAATCTattcagtacaattaa i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198320135 723 + 210400635 CCCACCCTACCATTATATACAAACACACATGTGTACACATATTTCTTTTTCTTTTTTTACATATTTCTATAACAGATATTAAAAACAGTAACAAACATGAACAGGTGTTAGGTTTGTCTGACAAAGCACAGTAGCTTAAAGAGTTGGCTTCCAG-AGCCTAAATGGCCCATCTAAAATCAGAGACTTGCTAAGTAATTCTTAGAAAA-TGGACACAGAG-TGAGCAGAAAGAGAAAGTAAATGTTTATTAAGAGACAAGCCAGTTGTAACTATTGATTCTAAGAAATCTTCTATTTGGGACAAGCATTCGAAAGTTCAAAATGATAAATAATTCTAAATAAGTTTTA-GGGCTAGGACCCCCTTAATCT-----TGGAGAGCCAGTAATATTGTCACATGCTTTTGGATAATTAAACC-ATGAGGATTCAATGCGACTGTGAGGACGTCTGTGAGAATTTAAGGATTA-CACGCCCTCCAGGCTCCCCGCCCCATCAGTGTAATTTTTCTCCTTTTATGGTCACTGCAATTTATTTTAAGACTGTTCAGAAGAAGCTG-ATTTTTATGAGTCAAAACGGCTTCAGCACATCTCAGGATGGTATTCTTGGTTAAACATTTACCTGGATTCAGTCCTAACAGATTAGGA-GAC---CACTATATTA---------------------------GATTATCTCCAAATTGCTGGTA--TTCATTCTATGTG---------------CATTACACATGAAAAA--CAAGAATAAATCTATTTAGCA----TAA i calJac3.chr1 C 0 C 0 s mm10.chr15 77163663 652 + 104043685 CCCACCCCACCATTGTTTGC--ACACACATGTGCAT----------------------ACATATTTCTGTAACCGATATTAAAAGCAGTAACAAACAGAGACAGGTGTGAGGTTAG-CTGACAGCCCACAGAAGGCT--GGAGTTGGCTT-----AGT------------TCTACAATCAGAA-----CTAAGTAGTCCTTAGAAAA-T-AACACACAA-TGCACAAAAGGTGAAAATAAACAGCTGT--AGAGACACACCAAGCAAAACTATTCCTCTT-TAAAATCCTCTACTTGGGACAAACATTCAAAGATTCAAAATG----ATAATTCTAAGTTAGTTTCAGTG--TTAGAC-CTCCTAATCTACTGAGGCAGAGCCAGTACTGCTAGGACATGCTTT-------------C-ATGGGGTTAGTAGGTAA--GTGAGGGCCTGTGCTGG--------------TATGGC-----TGCCCCCAACCATACCAAGTGCACCCTTTTCCTTCTACAGCCATCGAAGCTAAGTGCAAGGGTATTCAGGAGAAACTT-TTCTTTAAGGTTGAAATTGGCACTGACATATCTAGAGATGGTCTTCTGGGTACAATATGTACCTTA----------AACAGACTCAAAGACCATACAAAATACTA---------------------------GAATATCTGTAGCTTGTCAGCA--CTGATTCTCCATGAGGATcaaaacaaaacaaaacaaaacaaaaAACCAAAAAAAACCCAATCCAATATAATTAA i mm10.chr15 C 0 I 580 s canFam3.chr10 40944678 716 - 69331447 CCCACCCTACCATTATATACAAACACACACGTGCAC----------------------ACATATTTCTATAACAGATATTAAAAGCAGTAACAAACATGGACAGGTGTTAAGTCAGTCTGATAAAGCA-------------AGTTAGCTTTCTGAAGTCTAAACAGCCCATCTAAAACCAGAGAACTA--AAGTAATTCTTAGAAAATAGGACATAGAGTTGAGCAGAAAG------TAAATGCTTAGTAAGAGACACACTGTTTTTAAGTATTGCTCCTAAGAAATCCCCTACTTGGGGCAAGCATTCAAAAGTTCATAATGATAAATAATTCTAAATTAGTTTCAAGGGCTATGATCTCTCTAACCT-----TGGAGAGCCAGTAATATTATAACATGTTTCAGTAAGATTAAACCTACGAAGATTAAATGGAACTGTGAGG-CATCTGTGAGAGTTTATGTACAACTGTGTT-GCCACCCCCCCCACCCCCCGTGCAGGTTTTCTCTCCTTTTATGGTCACTGCATTTTATTTTAGGATTGTTCAGAAGAAATTGTTTTTTTAAGAGTCAAAATGGCCTTAGTACATCTA-AGACAGTTCTCTTGGTTAAACATTTACCTCAAATTGGTTCTAAAAGATTAGGAGGAC---CATTGTAACTacaatgtactagacaatgtactagacaGACTAAGTTCAGATTGTTGGTATTCTGGGGCCATGTG-----------------TTCTGTATGAGAGA--CAATAATGCATCAATTCAGTACAattaa i canFam3.chr10 C 0 C 0 a score=711870.000000 s hg38.chr22_KI270876v1_alt 172331 211 + 263666 -TAaaacatttattgaacatctattgcagacaaaatattgtac-taagccctggag---aaatga----acacagttctgttgtcaatgaattcacagtttatgggagaaatagataaggacacaggcaaAGCCAAAAAGCAAAACAATGCTACAGCACAAAACTAAATATTGTAAGCAACTTCTCATACATGGAAAAACA-TTTTTT--AAAAA-TTACTCTT s panTro4.chr22 34550658 211 + 49737984 -TAaaacatttattgaacatctattgcagacaaaatattgtac-taagccctggag---aaatga----acacagttctgttgtcaatgaatttacagtttatgggagaaatagataaggacacaggcaaAGCCAAAAAGCAAAACAATGCTACAGCACAAAACTAAATGTTGTAAGCAACTTCTCATACATGGAAAAACA-TTTTTT--AAAAA-TTACTCTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30964096 211 + 46535552 -taaaacatttattgaacatctattgcatacaaaatattgtac-taagccctggag---aaatga----acacagttctgttgtcaatgaatttacagtttatgggagaaacagataaggacacaggcaaagccaaaatgcaaaacaatgctaCAGCACAAAACTATATATTGTAAGCAACTTCTCATACATGGAAAAACA-TTTTTT--AAAAA-TTACTCTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100521955 212 - 115148730 -TAaaacatttattgaacatctattgcatacaaaatattgtac-taagccctggag---aaatga----acacagttctgttgtcaatgaatttactgtttatgggagaaatagataaggacacaggcaGAGCCAAAAAGCAAAACAATGCTACAGCACAAAACTAAATATTGTAAGCAACTTCTCATACATGGAAAAATATTTTTTT--AAAAA-TTACTCTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80669437 212 + 95678458 -taaaacattcattgcacatctattgcatacaaaatattgtac-taagccctggag---aaatga----acacagttctgctgccaatgaatttacagtttatgggagaaatagataaggacataggccaagccaaaaagcaaaataatggtaCAGCACAAAACTAAATATTGTAAGCAACTTCTCATACACAGAAAAACG-TTTTTT--AAAAAGTTACTCTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81095535 212 - 96509753 -taaaacattcattgcacatctattgcatacaaaatattgtac-taagccctggag---aaatga----acacagttctgctgccaatgaatttacagtttatgggagaaatagataaggacataggccaagccaaaaagcaaaataatggtaCAGCACAAAACTAAATATTGTAAGCAACTTCTCATACACAGAAAAACG-TTTTTT--AAAAAGTTACTCTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76353011 212 + 90941950 -TAAAACATTCATTGCACATCTATTGCATACAAAATATTGTAC-TAAGCCCTGGAG---AAATGA----ACACAGTTCTGCTGCCAATGAATTTACAGTTTATGGGAGAAATAGATAAGGACATAGGCCAagccaaaaagcaaaataatggtACAGCACAAAACTAAATATTGTAAGCAACTTCTCACACACAgaaaaacg-tttttt--aaaaagttactctt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18620846 212 + 33263144 -taaaacattcattgcacatctattgcatacaaaatattgtac-taagccctggag---aaatga----acacagttctgctgccaatgaatttacagtttatgggagaaatagataaggacataggccaagccaaaaagcaaaataatgctaCAGCACAAAACTAAATATTGTAAGCAACTTCTCATACACAGAAAAACA-TTTTTT--AAAAAGTTACTCTT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198320858 214 + 210400635 -TAaaacatttattgaacatctattgcatacaaaatattatac-taagtcctggag---aaatgaatagacacagttctgttgtcaatgaatttacagtttacgggagca----ataaagacatcagtaaagccagaAAGCAAAACAATGCTACAGCATAAAATTAAATATTGTAAGCAACTTCTCATACATGGAAAAACA-TTTTTTTAAAAAAATTACTCTT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40945394 215 - 69331447 ataaaa-atttactgagtatctactgcacactaggtactgtgcttaagcactacaatatgaacag----acatggttctgttgttgaggactttatagttcg-gggggaaacagataagcacacaggtaaAACGAAAAACCAAAAGGATGCTACAGCACAAAATTAAACACTGTGAGCAACTTCTCATACAAGGAATGAGA-TTTTTT--TCAAAGTTGCTCTT i canFam3.chr10 C 0 I 21 e mm10.chr15 77164315 580 + 104043685 I a score=937407.000000 s hg38.chr22_KI270876v1_alt 172542 329 + 263666 ggccgggtggtgtggctcacacctgtaatcccaacactttggga----ggctgaggcagggggatcacttgaggtcaggagttcgagaccagcctggctaacatggcaaaaccctgtctctattaaaaatacaaaaattagctgggcgtggtggcatgcaccctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaacccaggaggcgaaggctcaccaccgcagccgagatcccgccactgcactccagcctgggcaacagagcaaaactccatctcaaaaaaaaaaaaaaaa-------------------------------------------------GTTGCTCTTAATACACAGTTTTATAGT s panTro4.chr22 34550869 329 + 49737984 ggccgggtggtgtggctcacacctgtaatcccaacactttggga----ggctgaggcagagggatcacttgaggtcaggagttcgagaccagcctggctaacatggcaaaaccctgtctctattaaaaatacaaaaattagctgggcgtggtggcatgcaccctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaacccaggaggcgaaggctcaccaccgcagccgagatcacgccactgcactccagcctgggcaacagagcaaaactccatctcaaaaaaaaaaaaaaaa-------------------------------------------------GTTGCTCTTAATACACAGTTTTATAGT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30964307 327 + 46535552 ggccgggtggggtggctcacacctgtaatcccaacactttggga----ggctgaggcagggggatcacttgaggtcaggagttcgagaccagcctggctaacatggcaaaaccctgtctctattaaaaatacaaaaattagctgggcatggtggcatgcaccctgtaatcccagctacttgggaggctgaggcaggagaactgcttgaacccaggaggcgaaggctcaccactgcagccgagatcatgccactgcactcctgcctgggcaacagagcaaaactccatctc--aaaaaaaaaaaaaa-------------------------------------------------GTTGCTCTTAATGAACAGTTTTATAGT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100522167 328 - 115148730 ggccgggcggggtggctcacacctgtaatcccaacactttggga----ggctgaggcagggggatcacttgaggtcaggagttcgagaccagcctggctaacatggcaaaaccctgtctctattaaaaatacaaaaattagctgggcgtggtggcatgcaccctgtaatcccagctactcgggaggctgagacaggggaattgcttgaacccaggaggcgaaggctcaccaccgcagccgagatcacgccactgcactccagcctgggcaacagagcaaaactccatctc-aaaaaaaaaaaaaaa-------------------------------------------------GTTGCTCTTAATAAACAGTTTTATAGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80669649 379 + 95678458 ggctgggcaggatggctcacacctgtaatcccaacaatttgggaggctggctgaggcaggcggatcacttgaggtcaggagttcgagaccagcctggctaacatggcaaaaccctgtctctattaaaaatacaaaaattagctgggcctggtggcatgcaccctgtaatcccagctacttgggaggctgaggcaggagaactgcttgaacccaggaggcggaggctcaccactgcagccaagatcataccattgaactccagcctgggcaacagagcaagacttcatctc-aaaaaaaTATATATAtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtTGCTCTTAATAA--AGTTTTACAGT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81095747 363 - 96509753 ggctgggcaggatggctcacacctgtaatcccaacaatttgggaggctggctgaggcaggtggatcacttgaggtcaggagttcgagaccagcctggctaacatggcaaaaccctgtctctattaaaaatacaaaaattagctgggcctggtggcatgcaccctgtaatcccagctacttgggaggctgaggcaggagaactgcttgaacccaggaggcagaggctcaccactgcagccaagatcataccattgaactccagcctgggcaacagagcaagacttcatctc-aaaaaTATATATATA----------------tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtTGCTCTTAATAA--AGTTTTACAGT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76353223 375 + 90941950 ggctgggcaggatggctcacacctgtaatcccaacaatttgggaggctggctgaggcaggtggatcacttgaggtcaggagttcgagaccagcctggctaacatggcaaaaccctgtctctattaaaaatacaaaaattagctgggcctggtggcatgcaccctgtaatcccagctacttgggaggctgaggcaggagaactgcttgaacccaggaggcggaggctcaCCACTgcagccaagatcataccattgaactccagcctgggcaacagagcaagactccatctc-aaaaaaatatatata----tgtatgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgctctTAATAA--AGTTTTACAGT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18621058 368 + 33263144 ggctgggcaggatggctcacacctgtaatcccaacaatttgggaggctggctgaggcaggtggatcacttgaggtcaggagttcgagaccagcctggctaacatggcaaaaccccgtctctactaaaaatacaaaaattagctgggcctggtggcatgcaccctgtaatcccagctacttgggaggctgaggcaggagaactgcttgaacccaggaggcggaggcttgccactgcagccaagatcataccattgaactccagcctgggcaacagagcaagactccatctc-aaaaa---aTATATA--------tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtTGCTCTTAATAA--AGTTTTACAGT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198321072 325 + 210400635 ggccaggtgcggcagctcacacctgtaatcccagcactttggga----ggctgaggcaagtggatcacttgaggtcaggagttcaagaccagcctggccaacacggcaaaaccctgtctctactaaaaatataaaaatgagccaggcgtggtggtatgtgccatataatcccagctactcgggaagctaaggcaggaaaattgcttgaacctaggaggtaggggctg--caatg-agccgagatgaggccactgcacttcagcctgggcaacagagcaagaatccatctc-aaaaaaaaaaaaaGA-------------------------------------------------GTTGCTCTTAATAAACAGTTTTATAGT i calJac3.chr1 C 0 C 0 e mm10.chr15 77164315 580 + 104043685 I e canFam3.chr10 40945609 21 - 69331447 I a score=367391.000000 s hg38.chr22_KI270876v1_alt 172871 107 + 263666 CTCTCTCACCATTAGAACTATAAAACCCTACTTTGTCAATTCTTAACAGAGATTATCAAAGCCTCATAACATTTCAGATGTGCTTTGCCATACCTTAAGGGATTATA s panTro4.chr22 34551198 107 + 49737984 CTCTCTCACCATTAGAATTATAAAACCCTACTTTGTCAATTCTTAACAGAGATTATCAAAGCCTCATAACATTTCAGATGTGCTTTGCCATACCTTAAGGGATTATA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30964634 107 + 46535552 CTCTCTCACCATTAGAACTATAAAACCCTACTTTGTCAATTCTTAACAGAGATTATCAAAGCCTCATAACATTTCAGATGTGCTTTGCCATACCTTAAGGGATTGTA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100522495 107 - 115148730 CTCTCTCACCATTAGAACTATAAAACCCTACTTTGTCAATTCTTAACAGAGATTATCAAAGCCTCATAACCTTTCAGATGTGCTTTGCCACACCTTAAGGGATTGTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80670028 107 + 95678458 CTCTCTCACCATCAGAACTATGAAACCCTACTTTGACAATTCTTAACAGAGATTATCAAAGCCTTGTAACGTTTCAGATGTGCTTTGCCACACCTTAAGGGATTGTA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81096110 107 - 96509753 CTCTCTCACCATCAGAACTATGAAACCCTACTTTGACAATTCTTAACAGAGATTATCAAAGCCTTGTAACGTTTCAGATGTGCTTTGCCACACCTTAAGGGATTGTA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76353598 107 + 90941950 CTCTCTCACCATCAGAACTATAAAACCCTACTTTGACAATTCTTAACAGAGATTATCAAAGCCTTGTAACGTTTCAGATGTGCTTTGCCACACCTTAAGGGATTGTA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18621426 107 + 33263144 CTCTCTCACCATCAGAACTATAAAACCCTACTTTGACAATTCTTAACAGAGATTATCAAAGCCTTGTAACGTTTCAGATGTGCTTTGCCACACCTTAAGGGATTGTA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198321397 107 + 210400635 CTCTCTCACCATTAGAACTATAAAACCTGACCTTGTCAATTCTTAACAGAGATTATCAAAGACTTGTAACATTTCAGATGTGCTTTGGCACACCTTAAAGAACTGTA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40945630 104 - 69331447 CTTTCTCACCACCACAATTTTGAGAGTCTG-TTTGTCAATTCTTA--AGGGAGTATCTGAACCTTACAACATTTTTTATCTGATTTGTCACACACTAAGGGCCTATA i canFam3.chr10 I 21 C 0 e mm10.chr15 77164315 580 + 104043685 I a score=1013957.000000 s hg38.chr22_KI270876v1_alt 172978 345 + 263666 ATATAcagtcagccctccttatccttgggttacacatttgtgaattcaaccaactgcaaacaaaatatttgtg--aaaagcaataaaaaaaa--cccaatac-tgtataataacaaaaatataa-tacaaattttaaagacaat--agttataataattatttacatagcatttacattgttttggaaatta----taatttagagataatttaaagtctacaagaggatgaacataggttatatgcaaatactacaccattttatataagaaacttgagcatctgccaattttggtatctgcaggggtgtgagagggtgtatcctggtaccaatctcccacagatatgagaggacT s panTro4.chr22 34551305 345 + 49737984 ATATAcagtcagccctccttatccttgggttacacatttgtgaattcaaccaactgcaaacaaaatatttgtg--aaaagcaataaaaaaaa--cccaatac-tgtacaataacaaaaatataa-tacaaattttaaagacaat--agttataataattatttacatagcatttacattgttttggaaatta----taatttagagataatttaaagtctacaagaggatgaacataggttatatgcaaatactacaccattttatataagaaacttgagcatctgcaaattttggtatctgcaggggcgtgagagggtgtatcctggtaccaatctcccacagatTTGAGAGGACT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30964741 347 + 46535552 ATATAcagtcagccctccttatccttgggttacacatttgtgaattcaaccaactgcaaacaaaatatttgtg--aaaagtaataaaaaaaaaccccaatac-catacaataacaaaaatataa-tacaaattttaaagacaat--agttataataattatttacatagcatttacattgttttggaaatta----taatttagagataatttaaagtctacaagaggatgaacataggttatatgcaaatactacaccattttatataagaaatttgagcatctgcaaattttggtatctgcaggggcgtgagagggtgtatcctggtaccaatctcccacatatatgagacgact i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100522602 345 - 115148730 ATATAcagtcagccctccttatccttgggttacacatttgtgaattcaaccaactgcaaacaaaatatttgtg--aaaagcaattaaaaaaa--cccaatac-tctacaataacaaaaatataa-tacaaattttcaagataat--agttataataattatttacatagcatttacattgttttggaaatta----taatttagagataatttaaagtctataagaggatgaacataggttatatgcaaatactacaccattttatataagaaacttgagcatctgcaaattttggtatctgcaggggtgtgagagggtgtatcctggaaccaatctcccacagatatgagaggacT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80670135 344 + 95678458 ATATAcagtcagcccttcttatccttgggttacacatctgtgaattcaaccaactgcaaacaaaatatttgtg--aaaagcaattaaaaaaa---ccaatgcttgtacaataacaaaaatgtaa-tataaagtttaaagacaat--agttataataattatttacatagcatttac-ttattttagaaatta----caatttagagataatttaaagtctacaagaggatgaacataggttataggcaaatatgacaccattttatataagaaacctgagcatctgcaaatttttgtatctgcaggggcatgagagggtgtatcctggaaccaatctcccatagatatgagaggacg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81096217 344 - 96509753 ATATAcagtcagcccttcttatccttgggttacacatctgtgaattcaaccaactgcaaacaaaatatttgtg--aaaagcaattaaaaaaa---ccaatgc-tgtacaataacaaaaatgtaa-tacaaagtttaaagacaat--agttataataattatttacatagcatttacattattttagaaatta----caatttagagataatttaaagtctacaagaggatgaacataggttataggcaaatatgacaccattttatataagaaacctgagcatctgcaaatttttgtatctgcaggggcatgagagggtgtatcctggaaccaatctcccatagatatgagaggacg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76353705 340 + 90941950 ACATACAGTCAGCCCTTCTTATCCTTGGGTTACACATCTGTGAATTCAACCAACtgcaaacaaaatatttgtg--aaaagcaataaaaaaaa---ccAATGC-Tgtacaataacaaaaatgtaa-tacaaaGTTTAAAGACAAT--AGttataa----tatttacatagcatttacattattttagaaatta----caatttagagataatttaaagtatacaagaggatGAACATAGGTTATAGGCAAATatgacaccattttatataagaaacttgAGCATCTGCAAATTTTTGTATCTGCAGGGGCATGAGAGGGTgtatcctggaaccaatctcccatAGATATGAGAGGACG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18621533 344 + 33263144 ATATAcagtcagcccttcttatccttgggttacacatctgtgaattcaaccaactgcaaacaaaatatttgtg--aaaagcaataaaaaaaa---ccaatac-tgtacaataacaaaaatgtaa-tacaaagtttaaagacaac--agttataataattatttacatagcatttacattattttagaaatta----caatttagagataatttaaagcctacaagaggatgaacataggttatatgcaaatatgacaccattttatataagaaacttgagcatctgcaaattttggtatctgcaggggcatgagagggtgtatcctggaaccaatctcccatagatatgagaggacg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198321504 353 + 210400635 ATATAcagtcagccctccttatccttaggttatacatttgtggattcaaccaaccacagacaaaatatttgtgaaaaaagcaataaaaaaaa---ccaatac-tgtacaataacaaaaatataattaccaattttaaagataatacagttataagaattatttatatagcatttacattggtttaggaattataagtaattaagagataatttaaaatctacgagaggatgaacataggttatatgcaaatactacaccattttatataagaaacttgggcatctgcaaattctggtatcagcatgggtgtgagagggtggatcctggaaccaatttcccacagacatgagaggcCT i calJac3.chr1 C 0 C 0 e mm10.chr15 77164315 580 + 104043685 I e canFam3.chr10 40945734 0 - 69331447 C a score=137682.000000 s hg38.chr22_KI270876v1_alt 173323 39 + 263666 ATA---TATTCTAACAGTCTCCTGTATAGGTATTAAAATGGT s panTro4.chr22 34551650 39 + 49737984 ATA---TATTCTAACAGTCTCCTGTATAGGTATTAAAATGGT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30965088 39 + 46535552 ATA---TATTCTAACAGTCTCCTGTATAGATATTAAAATGGT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100522947 39 - 115148730 ATA---TATTCTAACAGTCTCCTGTATAGGTATTACAATGGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80670479 39 + 95678458 aTA---TATTCTAACGGTCTCCTGTATAGGTATTACAATGGT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81096561 39 - 96509753 aTA---TATTCTAACGGTCTCCTGTATAGGTATTACAATGGT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76354045 39 + 90941950 ATA---TATTCTAATGGTCTCCTGTATAGGTATTACAATGGT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18621877 39 + 33263144 aTA---TATTCTAACGGTCTCCTGTATAGGTATTACAATGGT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198321857 42 + 210400635 ATATATTATTCTAACAGTCTCCTGTATAGGTATTTAAATGGT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40945734 39 - 69331447 ATA---CATTCTAACTGTCCCCTATACGGTTATTAAAGTGGT i canFam3.chr10 C 0 I 21 e mm10.chr15 77164315 580 + 104043685 I a score=346235.000000 s hg38.chr22_KI270876v1_alt 173362 117 + 263666 AATTAAGAAATAACAAAAGActgggtacagcagcatgtgcctgtagtcccagctactagggaggatcatttgggccaggagttc-aagtctagcctgggcaacatagtgacacctttc s panTro4.chr22 34551689 118 + 49737984 AATTAAGAAATAACAAAAGActgggtacagcagcatgtgcctgtagtcccagctactagggaggatcatttgggccaggagttcaaagtctagcctaggcaacatagtgacacctttc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30965127 117 + 46535552 AATTAAGAAATAACAAAAGActgggtgtagcggcatgtgcctgtagtcccagctactagggaggaacacttgggccaggagttc-aagtctagcctgggcaacatagtgacacctttc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100522986 117 - 115148730 AATTAAGAAATAACAAAAgactgggtgcagcggcatgtgcctgtagtcccagctactagggaggatcacttgggccaggagttc-aagactagcctgggcaacatagtgacacTTTTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80670518 117 + 95678458 AACTaagaaataacaaaaaactgggtgcagcagcatatgcctgtagtcccagctactagggaggatcacttgggccaggagttc-aagtctagcctgggcaacatagtggtacctttc i rheMac3.chr10 C 0 I 65 s macFas5.chr10 81096600 117 - 96509753 AACTaagaaataacaaaaaactgggtgcagcagcatatgcctgtagtcccagctactagggaggatcacttgggccaggagttc-aagtctagcctgggcaacatagtggtacctttc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76354084 117 + 90941950 AactaagaaataacaaaaaactggGTGCAgcagcatatgcctgtagtcccagctactagggaggatcacttgggccaggagttc-aagtctagcctgggcaacatagtggtacctttc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18621916 117 + 33263144 AACTaagaaataacaaaaaactgggtgcagcagcatatgcctgtagtcccagctactagggaggatcacttgggccaggagttc-aagtctagcctgggcaacatagtgatacctttc i chlSab2.chr19 C 0 I 50 s calJac3.chr1 198321899 107 + 210400635 AATTAGGaaataacaaaagattgggtgcaatggcatgtggctgtagtcccagctacttgggaggatcacttgggttaggagttt-aagt-----ctgggcaacatagtgacac----- i calJac3.chr1 C 0 C 0 e mm10.chr15 77164315 580 + 104043685 I e canFam3.chr10 40945773 21 - 69331447 I a score=1638.000000 s hg38.chr22_KI270876v1_alt 173479 3 + 263666 ttt s panTro4.chr22 34551807 3 + 49737984 ttt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30965244 3 + 46535552 ttt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100523103 3 - 115148730 TTT i nomLeu3.chr7b C 0 C 0 e mm10.chr15 77164315 580 + 104043685 I e canFam3.chr10 40945773 21 - 69331447 I e calJac3.chr1 198322006 0 + 210400635 C e rheMac3.chr10 80670635 65 + 95678458 I e papAnu2.chr10 76354201 0 + 90941950 C e macFas5.chr10 81096717 0 - 96509753 C e chlSab2.chr19 18622033 50 + 33263144 I a score=6804.000000 s hg38.chr22_KI270876v1_alt 173482 20 + 263666 t----taaaaaaaaaaaaaaaaAA----- s panTro4.chr22 34551810 11 + 49737984 t-------------aaaaaaaaaa----- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30965247 21 + 46535552 t---tttaaaaaaaaaaaaaaaaa----- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100523106 24 - 115148730 aaaaaaaaaaaaaaaaaaaaaaaa----- i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81096717 17 - 96509753 -------aaaaaagaaagaaaaga----- i macFas5.chr10 C 0 I 52 s papAnu2.chr10 76354201 17 + 90941950 -------aaaaaagaaagaaaaga----- i papAnu2.chr10 C 0 I 45 s chlSab2.chr19 18622083 19 + 33263144 -----aagaaaaagaaaaaaaaga----- i chlSab2.chr19 I 50 I 4 s calJac3.chr1 198322006 8 + 210400635 --------------ACAAAAAA------- i calJac3.chr1 C 0 C 0 s canFam3.chr10 40945794 24 - 69331447 -----TTAAAAAATTAAGAAATAGCAAAG i canFam3.chr10 I 21 C 0 e mm10.chr15 77164315 580 + 104043685 I e rheMac3.chr10 80670635 65 + 95678458 I a score=30546.000000 s hg38.chr22_KI270876v1_alt 173502 8 + 263666 AGAATGTT s panTro4.chr22 34551821 8 + 49737984 agaaTGTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30965268 8 + 46535552 AGAATGTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100523130 8 - 115148730 aGAATGTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80670700 8 + 95678458 agaaTGTT i rheMac3.chr10 I 65 C 0 s macFas5.chr10 81096786 8 - 96509753 agaaTGTT i macFas5.chr10 I 52 C 0 s papAnu2.chr10 76354263 8 + 90941950 agaatgtt i papAnu2.chr10 I 45 C 0 s chlSab2.chr19 18622106 8 + 33263144 agaaTGTT i chlSab2.chr19 I 4 C 0 s calJac3.chr1 198322014 8 + 210400635 AGAATGTT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40945818 8 - 69331447 GTAATGTT i canFam3.chr10 C 0 C 0 e mm10.chr15 77164315 580 + 104043685 I a score=271391.000000 s hg38.chr22_KI270876v1_alt 173510 82 + 263666 TCTGCAATAAAACCTTATGCTAAATTTCCTCTTCTAATCAAATCAAATAATTAT-TAATCCTTCTTCCTCCCTGTACACTTCT s panTro4.chr22 34551829 82 + 49737984 TCTGCAATAAAATCTTATGCTAAATTTCCTCTTCTAATCAAATCAAATAATTAT-TAATCCTTCTTCCTCCCTGTACACTTCT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30965276 82 + 46535552 TCTGCAATAAAATCTTATGCTGAATTTCCTCTTCTAATCAAATCAAATAATTAT-TAATCCTTATTCCTCCCTGTACACTTCT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100523138 77 - 115148730 TCTGCAATGAAATCTTATGCTAAATTTCCTCT-----TCAAATCAAATAATTAT-TAATCCTTCTTCCTCCCTGTACACTTCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80670708 80 + 95678458 TCTGCAATAAAATCTTATGCTAAATTTCCTCTTCTAATCAAATGAAATAATTAT-TAATCTTTCTCCTTCCCTGTACACT--T i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81096794 80 - 96509753 TCTGCAATAAAATCTTATGCTAAATTTCCTCTTCTAATCAAATGAAATAATTAT-TAATCTTTCTCCTTCCCTGTACACT--T i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76354271 80 + 90941950 tctGCAATAAAATCTTATGCTAAATTTCCTCTtctaatcaaatgaaataattat-taatcTTTCTCCTTCCCTGTACACT--T i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18622114 80 + 33263144 TCTGCAATAAAATCTTATGCTAAATTTCCTCTTCTAATCAAATGAAATAATTAT-TAATCTTTCTCCTTCCCTGTACACT--T i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198322022 77 + 210400635 TCTGCAATAAAATCTTATGCTAAATTTCCTCC-----TCAAATCAAATAATTAT-TAATCTTTCTTCTTCCCTATACTCTTTT i calJac3.chr1 C 0 I 323 s mm10.chr15 77164895 67 + 104043685 TCTGCAATAAAATCTTACAAAAAATATCCTC------TCAAATCAAAGAATTCT-ACATGGCTTAACTTCACTG--------- i mm10.chr15 I 580 C 0 s canFam3.chr10 40945826 82 - 69331447 TCTGTATTAAAATCTTATACTAAATTTATTTCTACA-TCTAATCAAATCATTCTCTAACCCTTCTTCTTCCTTGTACGccatt i canFam3.chr10 C 0 C 0 a score=784665.000000 s hg38.chr22_KI270876v1_alt 173592 256 + 263666 GTCATTTCATACATAGCAGTACAGCAGGATGGGCCACATATACACTTATAAGCTAGTATCTTAAATCACTATTAAATCT---------------------------------------CCTAAGATTCTTCTTGATATGAAGACTGGAAAATGATGATATGTCTTATACATCATAAAAGGCTGTAATAATGAAC--TATGACTGACTAACTTAAA-CTTCAAGAGTTAACCCAGTTCAATATTTGGTGACTTAATTATAGAGGAA---ATTCCCAGA---TGCTGTTGTATTTAAGATGAAAGA s panTro4.chr22 34551911 256 + 49737984 GTCATTTCATACATAGCAGTACAGCAGGATGGGCCAAATATACACTTATAAGCTAGTATCTTAAATCACTATTAAATCT---------------------------------------CCTAAGATTCTTCTTGATATGAAGACTGGAAAATGATGATATGTCTTATACATCATAAAAGGCTGTAATAATGAAC--TATGGCTGATTAACTTAAA-CTTCAAGAGTTAACCCAGTTCAATATTTGGTGACTTAATTATAGAGGAA---ATTCCCAGA---TGCTGTTGTATTTAAGATGAAAGA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30965358 258 + 46535552 GTCATTTCATATATAGCAGTACAGCAGGATGGGCCACATATACACTTATAAGCTAGTATCTTAAATCACTATTAAATCT---------------------------------------CCTAAGATTCTTCTTGATATGAAGACTGGAAAATGATGATATGTCTTATACATCATAAAAGGCTGTAATAATGAACTATATGGCTGACTAACTTAAA-CTTCAAGAGTTAACCCAGTTCAATATTTGGTGACTTAATTATAGATGAA---ATTCCCAGA---TGCTGTTGTATTTAAGATAAAAGA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100523215 256 - 115148730 GTCATTTCATATATAGCAGTACAGCAGGATGGGCCACATATACACTTATAGGCTAGTATCTTAAATCACTATTAAATCT---------------------------------------TCTAAGATTCTTCTTGATATGAAGACTGGAAAATGATGATATGTCTTATACATCATAAAAGGCCATAATAATGAAC--TATGGCTGACTAACTTAAA-CTTCAAGAGTTAACCCAGTTCAATATTTGGTGACTTAATTATAGATGAA---ATTCCCAGA---TGCTGTTGTATTTAAGATGAAAGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80670788 246 + 95678458 GTCATTTCATATACAGCAGTATAGCAGGATGGGCCACACATACACTTATAAATTAGTATCTTAAATCACTATTAAATCT---------------------------------------CCTAAGATTCTTCTTGATATGAAGACTGGAAA---ATGATATGTCTTATACATCATAAAAGGCTGTAATAATGAAC--TATGGCTGACTAACTTAAA-CATCAAGAGTTAACCCAGTTCAATATTTGGTGACTTAATTACAGATGAC---ATTTCCAGA---TGCTCTTGTGTTTAAGA------- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81096874 246 - 96509753 GTCATTTCATATACAGCAGTATAGCAGGATGGGCCACACATACACTTATAAATTAGTATCTTAAATCACTATTAAATCT---------------------------------------CCTAAGATTCTTCTTGATATGAAGACTGGAAA---ATGATATGTCTTATACATCATAAAAGGCTGTAATAATGAAC--TATGGCTGACTAACTTAAA-CATCAAGAGTTAACCCAGTTCAATATTTGGTGACTTAATTATAGATGAC---ATTTCCAGA---TGCTCTTGTGTTTAAGA------- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76354351 249 + 90941950 GTCATTTCATATATAGCAGTACAGCAGGATGGGCCACACATACACTTATAAATTAGTATCTTAAATCACTATTAAATCT---------------------------------------CCTAAGATTCTTCTTGATATGAAGACTGGAAAATGATGATATGTCTTATACATCATAAAAGGCTGTAATAATGAAC--TATGGCTGACTAACTTAAA-CGTCAAGAGTTAACCCAGTTCAATATTTGGTGACTTAATTATAGATGAC---ATTTCCAGA---TGCTCTTGTGTTTAAGA------- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18622194 249 + 33263144 GTCATTTCATATATAGCAGTACAGCAGGATGGGCCACACATACGCTTATAAATTAGTATCTTAAATCACTATTAAATCT---------------------------------------CCTAAGATTCTTCTTGATATGAAGACTGGAAAATGATGATATGTCTTATACATCATAAAAGGCCGTAATAATGAAC--TATGGCTGACTAACTTAAA-CGTCAAGAGTTAACCTAGTTCAATATTTGGTGACTTAATTATAGATGAC---ATTTCCAGA---TGATCTTGTGTTTAAGA------- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198322422 255 + 210400635 GCCATTTCATATATAGCAGTACAGCAGGATTAGTCACATATACACTTATGAACTAGTATCTAAAATCACTATAAAATCT---------------------------------------TCTAAGATTCTTCTTGATATGAAGACCAGAAA---ATGATATGTCTTATA-ATCATAAAGGGCCGCAATAATGAAC--TATGGCTGACTAACTTAAA-CTTCAAGAGTTAACCCAGTTCAATATTTGGTGACTTAATTATAGAAGACAAAATTCCCAGG---TGCTGTTGTATTTAAAAAGAAAGA i calJac3.chr1 I 323 C 0 s mm10.chr15 77164962 247 + 104043685 --CATGTTGTTCAGAGCAGCACTGCATCACTGGGCACATGGGTACCTGTCCATTAGCGCCT-GAGTCACTGTTAAATCTTCTGAGATTCTGATTGGTGGCGCAGTGGTGCTCACTAAACCTAAGATTCCTCTTGAAGTAAAGACCTGAAGATGATAATGT------------------GACCATAACAATACAC--------TGACAAACCTAAAGCCCCACCAGTTAGCCCAGT-------------------------GTGAC---ACTGACAGAGGGTGATATTGTATTTAAGATAGCAGA i mm10.chr15 C 0 I 229 s canFam3.chr10 40945908 162 - 69331447 cccattccatt---------------------------------------------------------ccattccacct---------------------------------------cc----actctactt------------------------catctcatATACAGCAGTACTTGCCACAA------AC--TATGACTGAC------AAA-TTTCATAAGTTAACTCTGTTCAGTATTTGGTGAGTTAATTACAGATGATGAAGTTCCCAGA---TGGTACTGTATTTAAGATAACATA i canFam3.chr10 C 0 C 0 a score=513658.000000 s hg38.chr22_KI270876v1_alt 173848 159 + 263666 CTGTAATTCAAATCCTAAAACAACTGACATAATTTAAGCATGAAAGTGATCCCCAAATGT----TATTGAAGGCCTAGTCAATTTCCAGAGAAAGATTTAAATTCTTCTAGA--------CTATACATACAAGGTGAAAAGATACGACTGATGCATTATTAAATG-AAAAAA s panTro4.chr22 34552167 159 + 49737984 CTGTAATTCAAATCCTAAAACAACTGACATAATTTAAGCATGAAAGTGATCCCCAAATGT----TATTGAAGGCCTAGTCAATTTCCAGAGAAAGATTTAAATTCTTCTGGA--------CTATACATACAAGGTGAAAAGATATGACTGATGCACTATTAAATG-AAAAAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30965616 158 + 46535552 CTGTAATTCAAATCCTAAAACAACTGACATAATTTAAGCATGAAAGTGATCCCCAAATGT----TATTGAAGGCCCAGTCAATTTCCAGAGAGAGACTTAAATTCTTCTAGA--------CTATACATACAAGGTGAAAAGATATGACTGATGCATTATTAAATG--AAAAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100523471 156 - 115148730 CTGTAATTCAAATCCTAA---AACTGACATAATTTAAGCATGAAAGTGATCCCCAAATGT----TATTGAAGGCCTAGTCAATTTCCAGAGAGAGATTTAAATTCTTCTAGA--------CTATACATACAAGGTGAAAAGATACGACTGATGCATTATTAAATG-AAAAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80671034 157 + 95678458 -TGTAATTCAAAGCC-AAAACAACTGACATAATTTAAGCATGAAAGTGATCCCCAAATGT----TATTGAAGGCCTAGTCAATTTCCAGAGAGAAATTTAAATTCTTCCAGA--------CTATACATACAAGGTGAAAAGATATGACTGAGGCACTATTCAAGG-AAAAAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81097120 157 - 96509753 -TGTAATTCAAAGCC-AAAACAACTGACATAATTTAAGCATGAAAGTGATCCCCAAATGT----TATTGAAGGCCTAGTCAATTTCCAGAGAGAGATTTAAATTCTTCCAGA--------CTATACATACAAGGTGAAAAGATATGACTGAGGCACTATTCAAGG-AAAAAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76354600 157 + 90941950 -TGTAATTCAAAGCC-AAAACAACTGACATAATTTAAGCATGAAAGTGATCCCCAAATGT----TATTGAAGGCCTAGTCAATTTCCAGAGAGAGATTTAAATTCTTCCAGA--------CTATACATACAAGGTGAAAAGATATGACTGATGCactattcaagg-aaaaaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18622443 157 + 33263144 -TGTAATTCAAAGCC-AAAACAACTGATGTAATTTAAGCATGAAAGTGATCCCCAAATGT----TATTGAAGGCCTAGTCAATTTCCAGAGAGAGATTTAAATTTTTCTAGA--------CTATACATACAAGGTGAAAAGATATGACCGATGCACTATTCAAGG-AAAAAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198322677 158 + 210400635 TAGTAATTCAAATTCTAAAACAACTGATAAAATTTAAGCCTGAAAGTGATCTCCAAATGG----TACTGAAGGCCTTGTCAGTTTCCAGAG--AGATTTAAATTATTTTAGA--------CTATACATACAAAATGAAAATATATGACTGATGCATTACTAAACGAAAAAAA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40946070 165 - 69331447 TTATAATTCAAATTC-TAAACAGCTGGTAT-ATTTAAACTTGAAAATGGTCTCCATATACATAACGAGGAGGGCCTAGTCAATTTCTAGAG----CTTTAAATTCTTCTCGAGTATATATCTATACATACAAAGTGAAAAGATGTGACTGATACTTCATTAAATG-AAAAAA i canFam3.chr10 C 0 C 0 e mm10.chr15 77165209 229 + 104043685 I a score=827981.000000 s hg38.chr22_KI270876v1_alt 174007 275 + 263666 ATTgccaggcacagtggctcatgcc-----------tgtaatcccagcactttggaaggccaaggcgagcggatcacctaaggtcaggagtttgagaccagcctggccaacatgacgaaactccatctctactaaaaatacaaaaattagccgggcgtggtggtgggtgcctgtaatcccagctactcaggaggctcaggtggcagaatcatctaaacctgggaggctgaggttgcagtgacccgagatcgtaccactgcactccagcctgggcaacaaagtgagc s panTro4.chr22 34552326 275 + 49737984 ATTgccaggcacagtggctcatgcc-----------tgtaatcccagcactttggaaggccaaggcgagcggatcacctaaggtcaggagtttgagaccagcctggccaacatggcgaaactccatctccactaaaaatacaaaaattagccgggcatggtggtgggtgcctgtaatcccagctactcatgaggctcaggtggcagaatcatctaaacctgggaggctgaggttgcagtgacccgagattgtaccactgcactccagcctgggcaacaaagtgagc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30965774 275 + 46535552 ATTgccaggcacagtggttcatgcc-----------tgtaatcccagcactttggaaggccaaggcgagcggatcacctaaggtcaggagtttgagaccagcctggccaacatggcaaaactccatctctactaaaaatacaaaaattagccaggtgtggtagtgggtgcctgtaatcccagctactcaggaggctcaggtggcagaatcatctaaacctgggaggctgaggttgcagtgagccgagatcataccactgcactccagcctgggcaacaaagtgagc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100523627 275 - 115148730 ATTgccaggcacagtggctcatgcc-----------tgtaatcccagcactttggaaggccaaggcgagcggatcacctaaggtcaggagtttgagaccagcctggccaacatggcgaaactccatctctactaaaaatacaaaaattagccaggcgtggtggtgggcacctgtaatcccagctactcaggaggctcaggtggcagaatcacctaaacctgggaggctgaggttgcggtgacctgaaatcgtaccactgcactccagcctgggcaacaaagtgagc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80671191 275 + 95678458 ATTgctgggcacagtggctcacgcc-----------tgtaatcccagcactttggaaggccatggcgagccgatcacctaaggtcagcagttcgagaccagcctggtcaacatggcgaaactccatctctactaaaaatacaaaaattagccgggcgtggtggtggccccctgtaatctcagctactcaggaggctcaggtggcagaatcacctaaacctgggaggctgaggttgcagtgagctgagatcataccactgcactccagcctgggcaacgaagtaagc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81097277 275 - 96509753 ATTgctgggcacagtggctcacgcc-----------tgtaatcccagcactttggaaggccatggcgagccgatcacctaaggtcagcagttcgagaccagcctggtcaacatggcgaaactccatctctactaaaaatacaaaaattagccgggcgtggtggtggccccctgtaatctcagctactcaggaggctcaggtggcagaatcacctaaacctgggaggctgaggttgcagtgagctgagatcataccactgcactccagcctgggcaacaaagtaagc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76354757 275 + 90941950 attgctgggcacagtggctcacgcc-----------tgtaatcccagcactttggaaggccatggcGAGccaatcacctaaggtcaggagttcgagaccagcctggctaacatggcgaaactccatctctactaaaaatacaaaaattagccgggcgtggtggtggccccctgtaatctcagctactcaggaggctcaggtggcagaatcacctaaacctgggaggctgaggttgcagtgagctgagatcataccactgcactccagcctgggcaacaaagtaagc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18622600 275 + 33263144 ATTgccgtgcacagtggctcacgcc-----------tgtaatcccagcactttggaaggccatggcgagccgatcacctaaggtcaggagtttgagaccagcctggccaacgtggcgaaactccatctctactaaaaatacaaaaattagccgggcgtggtggtggccgcctgtaatcccagctactcaggaggctcaggtggcagaatcacctaaaactgggaggctgaggttgcagtgagccgagatcatgccactgcactccagcctgggcaacaaagtaagc i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198322835 286 + 210400635 AATAccgggtgcagtggcttacacctgtaatccaggtgtaatcccagcactttaggaggctaaggcaagcgaatcacctaaggccagaggttcgagactagccgggccaacatgtcaaaactccatctctactaaaaatacaaaaattagctaggtatggtggtgggtgcctgtaatcccagccactcaggaggctaaggtggcagaactgcttgaatctcagaggcagaggatgcagtgagcctggatggtaccactgcactccagcctgggcaacaaagtgagc i calJac3.chr1 C 0 I 304 e mm10.chr15 77165209 229 + 104043685 I e canFam3.chr10 40946235 0 - 69331447 C a score=57180.000000 s hg38.chr22_KI270876v1_alt 174282 39 + 263666 ctctgtct----aaaaaaaaaaaaaaaagaaagaaag--------aaaaaT s panTro4.chr22 34552601 38 + 49737984 ctctgtct-----aaaaaaaaaaaaaaagaaagaaag--------aaaaaT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30966049 33 + 46535552 ctctgtct----------aaaaaaaaaagaaagaaag--------aaaaaT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100523902 48 - 115148730 ctctgtct---aaaaaaaaaaaaaaaaagaaagaaagaaaaaTATAAAAAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80671466 38 + 95678458 ctctgtctc-------aaaaaaaaaaaaaaaagaaagaa------aacaaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81097552 44 - 96509753 ctctgtctca-aaaaaaaaaaaaaaaaaaaaagaaagaa------aACAAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76355032 29 + 90941950 ctctgtctc-------aaaaaaaaaaaaaaaaa---------------aaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18622875 45 + 33263144 ctctgtctcacaaaaaaaaaaaaaagaaagaaagaaaaa------AAAAAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198323425 51 + 210400635 ctctgtctcaaaaaaaaaaaaaaaaaaaaaaaggaaaaGAAAAAGAAAACG i calJac3.chr1 I 304 C 0 e mm10.chr15 77165209 229 + 104043685 I e canFam3.chr10 40946235 0 - 69331447 C a score=1692105.000000 s hg38.chr22_KI270876v1_alt 174321 600 + 263666 ATTATGTTGTTTAATAATGTGT----TATAGTTCTATATTTGTAAATGAAATTATATAGGGgtatgcatgcatgtatgaatctatgtgtacatcaatcaataaattatgtatgtaATT-AGACTTTGAAAAGCAGTGCTCCAAATAAAATG---AAAAAACTAAAAAATTTAT-TGTGTAATTAGTTAAGCTTTTATTAAGTCACatataagttagacatgtatgtatatgtatacacatatacgtaatgtattggttgacatacacaccaatatatgccatatgtccac---a-----cattatatat-----acacatacca---ttatatgccataca-------------tatacatatatataCACACgtgtgtgt------gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtAGCCATTAAGACAAAACTAGTACCTCCAGGCGGT-------GGAAT---GGGGTGGTGGCTGGTTTTCGCTTACTAATTTAGAGATAAATTTCCAAT-CGTTCATACACATTTAAATTAGCATTAACTGCTCCTATAATTTG---------TTAAAAGTTTAAAGGAACCAAAACAGATTTTACTTTCAATACAAGTACTTTAAAAATTATTAATATTCCCATGGTCTCTGATTTATAT s panTro4.chr22 34552639 592 + 49737984 ATTATGTTGTTTAATAATGTGT----TATAGTTCTATATTTGTAAATGAAATTATATAGGGGTATGCATGCATGTATGAATCTATGTGTACATCAATCAATAAATTATGTATGTAATT-AGACTTTGAAAAGCAGTGCTCCAAATAAAATG---AAAAAACTAAAAAATTTAT-TGTGTAATTAGTTAAGCTTTTATTAAGTCACATATAAGTTAGACATGTATGTATATGTATACACATATACGTAATGTATTGGTTGACATACACACCAATATATGCcatatgtatac---a-----cattatatat-----acacatacca---ttatatgccataca-------------tatacatatatatacacaC--------------gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtAGCCATTAAGACAAAACTAGTACCTCCAGGCGGT-------GGAAT---GGGGTGGTGGCTGGTTTTCGCTTACTAATTTAGAGATAAATTTCCAAT-CGTTCATACACATTTAAATTAGCATTAACTGCTCCTATAATTTG---------TTAAAAGTTTAAAGGAACCAAAACAGATTTTACTTTCAATACAAGTACTTTAAAAATTATTAATATTCTCATGGTCTCTGATTTATAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30966082 591 + 46535552 ATTATGTTGTTTAATAATGTGT----TATAGTTCTATATTTGTAAATGAAATTATATAGGGGTATGCATGCATGTATGAATCTATGTGTACATCAATCAATAAATTATGTATGTAATT-AGACTTTGAAAAGCGGTGCTCCAAATAAAATG--AAAAAAACTAAAAAATTTATGTGTGCAATTAGTTAAGCTTTTATTAAGTCacatataagttagacatgtatgtatatgtatacacatatacgtaatgtactggttgacatacacaccaatacatgccatatgtatac---a-----cattatatat-----acacacacca---ttatatgccataca-------------tatacatatatatacacaC--------------gtgtgtgtgtgtgtgtgtgtgtat---tgtgtgtgtgtAGCCATTAACACAAAACTAGTACCTCCAGGCGGT-------GGAAT---GGGGAGGTGGCTGGTTTTCGCTTACTAATTTAGAGATAAATTTCCAGT-CGTTCATACACATTTAAATTAGCATTAACTGCTCCTATAATTTG---------TTAAAAGTTTAAAGGAACCAAAACAGATATTACTTTCAATACAAGTACTTTAAAAATTATTAATATTCTCGTGGTCTCTGATTTATAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100523950 587 - 115148730 ATTATGTTGTTTAATAATGTGT----TATAGTTCTATATTTGTAAATGAAATTATATAAGGgtatgcatgcatgtatgtatctatgtGTACATCAATCAATAAATTATGTATGTAATT-AGACTTTGAAAAGCTGTGCTCCAAATAAAATG---AAAAAATGAAAAAATTTATGTGTGTAATTAGTTAAGCTTTTATTAAGTCACatataagttagacatgtatgtatatgtatacacatatatgtagtatattggttgacatacacaccaatatatgccatatgtatat---a-----cattatatat-----gcacacacca---ttatatgccataaa-------------tatacatatatatatatat--------------aCACACACgtgtgtgtgtgtg------tgtgtgtgtgtAGCCATTAAGACAAAACTAGTACCTCCAGGGGGT-------GGAAT---GGGGAGGAGGCTGGTTTTCACTTACTAATTTAGAGATAAATTTCCAAT-CGTTCATACACATTTAAATTAGCATTAACTGCTCCTATAATTTG---------TTAAAAGTTTAAAGGAACCAAAACAGATTTTACTTTCAATACAAGTACTTTAAAAATTATTAATATTCTCTTGGTCTCTAATTCATAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80671504 572 + 95678458 aTTATGTTGTTTAATAATCTGT----TATAGTTCCATATTCGTAAACGAAATTATATAGGGATATGCATGCATGT----ATCTATGTATAC----ATCAACAAATTATGTCTGTAATT-AGACTTTGAAAAGTGGTGCTCCAAATAAAATG---AAAAAACTAAAACATTTACGTGTGTAATTAGTTAAGCT----TTAAGTCACATGTAAGTtagacatgtatgtatatgtatacacatatatgtaatgtattggttgacatacacaccaatatatgccatatgtatac---a-----cattatatat-----acacacacca---ttatatgccataca-------------tatacatatatatacacac--------------atGTGTGTTTGTGTATGTGTGT---------TGTGTGTAGGCATTAAGACAAAACTAGTACCTCCAGAGGGT-------GGAAT---GGGGAGGTGGCCGGTTTTCACTTACTAATTTAGAGATAAATTTCCAAT-CGTTCATATACATTTAAATTAGCATTAACTGCTCCTATAATTTG---------TTAAAAGTTTAAAGGAACCAAAACAGATTTTACTTTTAATACAAGTACTTTAAAAATTATTAATATTCTTTTGGTCTCTAATTTATAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81097596 572 - 96509753 ATTATGTTGTTTAATAATCTGT----TATAGTTCCATATTTGTAAACGAAATTATATAGGGATATGCATGCATGT----ATCTATGTATAC----ATCAACAAATTATGTCTGTAATT-AGACTTTGAAAAGTGGTGCTCCAAATAAAATG---AAAAAACTAAAACATTTACGTGTGTAATTAGTTAAGCT----TTAAGTCACATGTAAGTTAGACatgtatgtatatgtatacacatatatgtaatgtattggttgacatacacaccaatatatgccatatgtatac---a-----cattatatat-----acacacacca---ttatatgccataca-------------tatacatatatataCACAC--------------Atgtgtgtttgtgtatgtgtgt---------tgtgtgtAGGCATTAAGACAAAACTAGTACCTCCAGAGGGT-------GGAAT---GGGGAGGTGGCCGGTTTTCACTTACTAATTTAGAGATAAATTTCCAAT-CGTTCATATACATTTAAATTAGCATTAACTGCTCCTATAATTTG---------TTAAAAGTTTAAAGGAACCAAAACAGATTTTACTTTTAATACAAGTACTTTAAAAATTATTAATATTCTTTTGGTCTCTAATTTATAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76355061 572 + 90941950 attatgttgtttaaTAATCTGT----TATAGTTCCATATTTGTAAACGAAATTATATAGggatatgcatgcatgt----atctatGTATAC----ATCAACAAATTATGTCTGTAATT-AGACTTTGAAAAGTGGTGctccaaataaaatg---aaaaaactaaaacatttacGTGTGTAATTAGTTAAGCT----TTAAGTCACATGTAAGTTagacatgtatgtatatgtatacacatatatgtaatgtattggttgacatacacaccaatatatgccatatgtatac---a-----cattatatat-----acacacacca---ttatatgccataca-------------tatacatatatatacacac--------------gtgtgtgtttgtgtgtgtgtgt---------tgtgtgtaggCATTAAGACAAAACTAGTACCTCCAGAGGGT-------GGAAT---GGGGAGGTGGCCGGTTTTCACTTACTAATTTAGAGATAAATTTCCAAT-CGttcatatacatttaaattaGCATTAACTGCTCCTATAATTTG---------TTAAAAGTTTAAAGGAACCAAAacagattttacttttaatacaagtactttaaaaattattaatattcttttggTCTCTAATTTATAt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18622920 577 + 33263144 ATTATGTTGTTTAATAATGTGT----TATAGTTCCATATTTGTAAATGAAATTATATAGGGATATGCATGCATGT----ATCTATGTATAC----ATCAATAAATTATGTCTGTAATT-AGACTTTGAAAAGTGGTGCTCCAAGTAAAATG---AAAAAACTAAAACATTTAGGTGTGTAATTACTTAAGCT----TTAAGTCACATGTAAGTTAGACatgtatgtatatgtatacacatatatgtaatgtattggttgacatacacaccaatatatgccatatgtatac---a-----cattatatat------cacacacca---ttatatgccataca-------------tatacatatatataCACAC--gtgtgt------gtgtgtgtttgtgtgtgtgtgt---------tgtgtgtAGGCATTAAGACAAAACTAGTACCTCCAGAGGGT-------GGAAT---GGGGAGGTGGCTGGTTTTCACTTACTAATTTAGAGATAAATTTCCAAT-CGTTCATATACATTTAAATTAGCATTAACTGCTCCTATAATTTG---------TTAAAAGTTTAAAGGAACCAAAACAGATTTTACTTTTAATACAAGTACTTTAAAAATTATTAATATTCTTTTGGTCTCTAATTTATAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198323476 596 + 210400635 ATTATGTTTTTAAATAATGTGT----TATAGTTCTATATTTTTAAATGAAATTATATAGGGGTATGCACGCATGT----ATCCATGTGTACATCAATCAATAAATTATGTATGGAATTAAGACTTTGAAAAGCAGTGCTGCaaataaaattttttaaaaactaaaaaatGTATG--------TAATTAAGCT-TTAGTAAGTCACCta-----------------------tatacacatatatgtaacatattggttgacatacacaccaatatatgccatatgtatac---acataccattatataccataaatacacatt----ttatgtaacatacatgttcacacacaCtatatatgtatatatacat--atatgtcagcccatacatacatacatatgtatatgtatatatTATTTTTTAGGCATTAAGAC-AAACTAGCACCTCCAGGGGGTAGAATGGGGAAT---GGGGAGGTGGCTGGTTTTCACTTACTAATTTAGAGATAAATTCCCAAT-CGTTCAAATACACTTAAATTAGCATTAACTGCTCCTATAATTT--------------AAGTTTAAAGGAACCAAAATAGGTTCTACTTTCAATACAAGCACTTTAAAAATTACTAATATTCTCTTGGTCTCTAATTTATAT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40946235 487 - 69331447 ATTA--TTACTGAATAATGTGTACAGTATATTTCCATATTTTTAA------------------ATGCACATATGT----ATCTCTATATGT--CAATCAGTAAATCATGC----AATT-------------------------------TC-----------------------------------TAAGCT----TTATGTCTTACATGTCATACAGTTATATGTATACACACATACATATATATAACTTACTG--------ACACACC-ACAGATGCCATATATATACTATG-----TATTATATGT----AACATGTAATATATTTATa---cacaca-------------cacacacacacacacacac--------------acacacacacacacacacaTAT-------------TATAGGCA-TAAGACAAAACCTGCACCTCTAAGGGGT-------AGGATGGCGGGGAGGTAGTTGGCT-----TTATTATTTTAGAGAGAAACTTCTAGTATGTTCAAACACATTTAAATTAGCCTTTGGCACTCCTATAATATATCTTTTTATTTATAAGTTTAAGGGAATCAAGACAGGTTTTCCTTTGAGTATAAGTAGTTTAAAAACTAGCAATCTT-TCTCAGTCTC--ATCTATAT i canFam3.chr10 C 0 I 43 e mm10.chr15 77165209 229 + 104043685 I a score=1933755.000000 s hg38.chr22_KI270876v1_alt 174921 686 + 263666 GACTAggccaggcacggtggctcacgcctgtaatctcagcactttgggaggccaaggcaggtggatcacctgaggtcaggtgttcgagaccagcctgaccaatgtggtgaaaccccttctctgttaaaaatacaaaaaattagccaggcatggtggtgcatgactgtaatcccagctacctaggaggctgaagctggagaactgcttgaatctgggaggcggaggttgcagtgagccgagactgtgccactgcactccagcctgggcaacgaaagcaaaactctgtctc------------------------------------------------------------taataataataataataataataCGACCACATTTGCTTTACCTAACATAATGTGATAACTATAAACTCTCATTTAAGACTAGAGGATATAggctggaagcagtggctcatgcctataatcccagcactctgggaagctgagtcaggaggattgcttgaggcctggagtttgagaccagcctggtcaacatattaagaccctgcctatagccccgc--cccaaaa---aaa----------ttagctgggtatggtggcacacagcatgtgcctatactcccacctacttcggaggctgaggtgggagaatcacataaacccaggaggtcaaggttacagtgagttatgatcatgccactgtactctagcctgggcaacacagcaag-accctgtctcttg------aaaaaaaaaaaGA s panTro4.chr22 34553231 700 + 49737984 GANTAggccaggcacggtggctcacgcctgtaatctcagcactttgggaggccaaggcaggtggatcacctgaggtcaggtgttcgagaccagcctgaccaatgtggtgaaaccccttctctgttaaaaatacaaaaaattagccaggcatggtggtgcatgactgtaatcccagctacctgggaggctgaagctggagaactgcttgaatctgggaggcagaggttgcagtgagccgagactgtgccactgcactccagcctgggcaacgaaagcaaaactctgtctc------------------------------------------------taataataataataataataataataataataataCGACCACATTTGCTTTACCTAACATAATGTGATAACTATAAACTCTCATTTAAGACTAGAGGATATAggctggaagcagtggctcatgcctataatcccagcactctgggaagctgagtcaggaggattgcttgaggcctggagtttgagaccagcccggtcaacatattaagaccctgtctatacccccgc--cccaaaa---aaa----------ttagctgggtatggtggcacacagcatgtgcctatactcccacctacttcggaggctgaggtgggagaatcacataaacccaggaggtcaaggttacagtgagttatgatcatgccactgtactctagcctgggcaacacagcaag-accctgtctcttg----aaaaaaaaaaaaaGA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30966673 718 + 46535552 GACTAggcaaggcatggtggctcatgcctgtaatctcagcactttgggacgccaaggcaggtggatcacctgaggtcaggagttcgagaccagcctgaccaacgtggtgaaaccccttctctgttaaaaatacaaaaaattagccaggcatggtggtacatgactgtaatctcagctacctgggaggctgaagctggagaactgcttgaatctgggaggcggaggttacagtgagccgagactgcgccactgcactccagcctgggcaatgaaagcaaaactctgtctca------------------------------------aataataatgataataataataataataataataataataataataCGACCACATTTGCTTTACCTAGCATAATGTGATAACTATAAACTCTCATTTAAGACTAGAGGATATAggctggaagcagtggctcatgcctataatcccagcactctgggaagctgagtcaggaggattgcttgaggcctggagtttgagaccagcctggtcaacatattaagaccctgtctatacccccccaaaaaaaaa---aaa----------ttagctgggtatggtggcacacagcacgtgactatactcccacctacttgggaggctgaggtgggagaatcacataaacccaggaggtcgaggttacagtgagttatgatcatgccactgtactctagcctgggcgacacagcaaa-accctgtctcttgaaaaaaaaaaaaaaaaaGA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100524537 692 - 115148730 GACTAggccagacacggtggctcacgcctgtaatcttagcactttgggaggccaaggcaggtggatcacctgaggtcaggagttcgagaccagcctgactaacgtggtgaaaccccttctctgttaaaaatgcaaaaaattagccaggcatggtagtgcatgactgtaatcccagctacctgagaggctgaggctggagaactgctcgaatctgggaggcggaggttgcagtgagctgagactgcgccactgcactccagcctgggcaacgaaagcacaactctgtctc------------------------------------------------------------aTataataatgataataataataCGACCACATTTGCTTTACCTAACATAATGTGATAACTATAAACTCTCATTTAAGACTAGAGGATATAggctggaagcagtggctcatgcctataatcccagcactctgggaagctgagtcaggaggattgcttaaggcctggagtttgagaccagcctggtcagcacaggaagaccctgtctatacccaaaaaaaagaaaa---aaa----------ttagctgggtatggtggcacacagcacgtgcctatactcccacctacttgggaggttgaggtgggagaatcacataaacccaggaggtcgaggttacagtgagttatgatcatgccactgtactctagcctgggcgacatagcaag-accctgtctcttg--aaaaaaaaaaaaaaaGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80672076 748 + 95678458 GACTAggccaagcacagtggctcacgcctgtaatctcagcacttcggaaggccgaggcaggtggatcacctgaggtcaggagttcaagaccagactgaccaatgtggtgaaaccccttctctgttaaaaatacaaaaacttagccaggcatggtggtgcatgactgtaatcccagctacctgggaggctgaggtgggagaattgcatgaatctgagaggcggaggttgcagtgagccgagattgcgccactgtactccagcctgggcaacaagagcaaaactctgtctcaaataataataataataataataataataataataataataataataataataataataataataataataataataataatGCGACCACATTTGCTTTACCTAACATAATGTCATAACTGTAAACTCTCATTTAAGACTAGGGGATATAggctggaagcagtggctcatgcctacaatcccagcactctggggagctgagtcagaaggatcacttaaggcctggagtttgagaccagcctggtcaacatagtaagaccctgtctattcccccct--caaaaaa---aaata-------tttagtttggtatggtggcacacagaacgtgcctatactcccacctacttgggaggctgaggtggaagaatcacataaacccaggaggtcgagggtacagtgagttctgagcatgccactgcactctagcctgtgtgacacagcaag-accctgtctcCTG-------GGGAAAAAAAGA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81098168 703 - 96509753 GACTAggccaagcacagtggctcacgcctgtaatctcagcacttcggaaggccgaggcaggtggatcacctgaggtcaggagttcaagaccagactgaccaatgtggtgaaaccccttctctgttaaaaatacaaaaacttagccaggcatggtggtgcatgactgtaatcccagctacctgggaggctgaggtgggagaattgcatgaatctgagaggcggaggttgcagtgagccgagattgcgccactgtactccagcctgggcaacaagagcaaaactctgtctca---------------------------------------------aataataataataataataataataatagtaataatGCGACCACATTTGCTTTACCTAACATAATGTCATAACTGTAAACTCTCATTTAAGACTAGGGGATATAggctggaagcagtggctcatgcctacaatcccagcactctggggagctgagtcagaaggatcacttaaggcctggagtttgagaccagcctggtcaacatagtaagaccctgtctattcccccct--caaaaaa---aaata-------tttagcttggtatggtggcacacagaacgtgcctatactcccacctacttgggaggctgaggtggaagaatcacataaacccaggaggtcgagggtacagtgagttctgagcatgccactgcactctagcctgtgtgacacagcaag-accctgtctcCTG-------GGGAAAAAAAGA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76355633 708 + 90941950 gactaggccaggcacagtggctcacgcctgtaatctcagcactttggaaggccgaggcaggtggatcacatgaggtcaggagttcaagaccagactgaccaacgtggtgaaaccccttctctgttaaaaatacaaaaacttagccgggcatggtggtgcatgactgtaatcccagctacctgggaggctgaggtgggagaattgcgtgaatctgggaggcggaggttgcagtgagccgagattgcgccactgtactccagcccaggcaa-aagagcaaaactctgtctca---------------------------------------aataataataataataataataataataataataataataatgcgaCCACATTTGCTTTACCTAACATAATGTCATAACTGTAAACTCTCATTTAAGACTAGAGGATAtaggctggaagcagtggctcatgcctacaatcccagcactctgggaagctgagtcagaaggatcacttaaggcctggagtttgagaccagcctggtcaacacagtaagaccctgtctattcccccct--caaaaaa---aaata-------tttagctgggtatagtggcacacaGCACGTGCCTATactcccacctacttgggaggctgaggtggaagaatcacataaacccaggaggtcgagggtACAGTGAGTtctgagcatgccactgcactctagcctgtgtgacacagcaag-accctgtctcctg-------gggaaaaaaaga i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18623497 700 + 33263144 GACTAggccaggcacggtggctcacacctgtaatctcagcacgttggaaggccgaggcaggtggatcacctgaggtcaggagttcaagaccagactgaccaacgtggtgaaaccccttctctgttaaaaatacaaaaacttagccgggcatggtggtgcatgactgtaatcccagctacctgggaggctgagatgggagaattgcgtaaatctgggaggcggaggttgcagtgagccgagattgcgccactgtactccagcctgggcaacaagcgcaaaactctgtttca------------------------------------------------aataataataataataataacaataataataatGCGACCACATTTGCTTTACCTAACATAATGTCCTAACTGTAAACTCTCATTTAAGACTAGAGGATATAggctggaagcagtggctcatgcctacaattccagcactctgggaagctgagtcagaaggatcacttaaggcctggagtttgagaccagcctggtcaacatagtaagaccctgtctattcccccct--caaaaaa---aaata-------tttagctgggtatggtggcacacagtacgtgcctatactcccacctacttgggaggctgaggtgggagaatcacacaaacccaggaggtcgagggtacagtgagttctgagcatgccactgcactctagcctgtgtgacacagcaag-accctgtctcCTG-------GGGAAGAAAAGA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198324072 672 + 210400635 GACTAAgctaagcatggtggctcacgcctgtaatcccagccctttgggaggctaaagcaggtggatcacatgagatcaggaatttgagatcagcctgaccaatgtggtgaaaccctgtctctgctaaaaatatgaaaaattagccgggcaaggtggtgcatgactgtaattccagctacttgggaggct--------------------------------gaggctgcagtgagccgagattgcgccactgcactccagcttgggcaacgagagcaaaactccgtctca----------------------------------------------------aaaaaataaata--aataaaaaTGATAATATGACCGCATTTGCTTTACCTAACATAATATCATAACTATAAATTTTCACTTAATACTAGAGGATATAggctggaagtggtggctcatgcctataataccagcactttgggaagctgagtcaggaggatcacttaaggcctagagttcaagatcagcctggtcaacatagtaagaccttgtctataccaggaa--gaaaaaacgcaaataaacaaacattagctgcgtatggtggtacacagcatgtgcctgcactcccacctactcagg-----gaggtgagaaaatcacatgagcctaggaggtcaaggttacagtgacttatgatcatgccactgtactcttgcgtgggtgacacagccagaaccctgtctATTG---GGGGGGAAAAAAACAA i calJac3.chr1 C 0 C 0 e mm10.chr15 77165209 229 + 104043685 I e canFam3.chr10 40946722 43 - 69331447 I a score=856647.000000 s hg38.chr22_KI270876v1_alt 175607 257 + 263666 CTAGAGGATATACACAATAAAGAATCTTAATCTTTAGATATATGATTAAGATATCTC-ACCTAGGTTCTGCTGAAACCATGCCCAGGTATAGCTTAAATCATCAGCTCTTCAGAAAAATGTCAAAATAATGTAA-TATTTGAATTATAACTCT---TATACTTTATCTTGCCTTTTACCCATTTCTTTCTGTAAAATTTTTTTAATTGCTATAATTTGAAGACTAATAACTTAGTCAAACCAAAATTTGAAATAATACTGAT s panTro4.chr22 34553931 256 + 49737984 CTAGAGGATATAGACAATAAAGAATCTTAATCTTTAGATATATGATTAAGATATCTC-ACCTAGGTTCTGCCGAAACCATGACCAGGTATACCTTAAATAATCAGCTCTTCAGAAAAATGTCAAAATAATGTAA-TATTTGAATTATAACTCT---TATACTTTATCTTGCC-TTTACCCATTTCTTTCTGTAAAATTTTTTTAATTGCTATAATTTGAAGACTAATAACTTAGTCAAACCAAAATTTGAAATAATACTGAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30967391 257 + 46535552 TTAGAGGATATAGACAATAAAGAATCTTAATCTTTAGATATATGATTAAGATAGCTC-ACCTAGGTTCTGCCGAAACCATGCCCAGGTATAGCTTAAATAATCAGCTCTTCAGAAAAATATCAAAATAATGTAA-TATTTGAATTATAACTCT---TATACTTTATCTTGCCTTTTACCCATTTCTTTCTGTAAAATATTTTTAATTGTTATAATTTGAAGACTAATAACTTAGTCAAACCAAAATTTGAAATAATACTCAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100525229 257 - 115148730 CTAGAGGATATAGACAATAAAGAATCTTAATCTTTAGATATATGATTAAGATATCTC-ACCTAGGTTCTGCCAAAACCATGCCCAGGTATACCTTAAATAATCAGCTCTTCAGAAAAATGTCAAAATGATGTAG-TATTTGAATTATAACTCT---TATACTTTATCTTGCCTTTTATCTATTTCTTTCTGTAAAATTTTTTTAATTGTTATAATTTGAAGACTAATAACTTAGTCAAACCAAAATTTGAAATAATACTGAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80672824 257 + 95678458 CTAGAGGATATAGACAATAAAGAATCTTAATCTTTAGATATATGATTAAGATATCTC-ACCTAGGTTCTGCTGAAATCATGCCCAGGTCTAGCTTAAATAATCAGCTCTTCGGAAAAATGTCAAAATAATTAAA-TATTTGAATTATAACTCT---TATACTTTATCTTGTCTTTTACCCATTTCTTTCTGTAAATTTTTTTTAATTGTTGTAATTTGAAGACTAGTAACTTAGTCAAACCAAAATTTGAAATAATACTGAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81098871 257 - 96509753 CTAGAGGATATAGACAATAAAGAATCTTAATCTTTAGATATATGATTAAGATATCTC-ACCTAGGTTCTGCTGAAATCATGCCCAGGTCTAGCTTAAATAATCAGCTCTTCGGAAAAATGTCAAAATAATTTAA-TATTTGAATTATAACTCT---TATACTTTATCTTGTCTTTTACCCATTTCTTTCTGTAAATTTTTTTTAATTGTTGTAATTTGAAGACTAGTAACTTAGTCAAACCAAAATTTGAAATAATACTGAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76356341 257 + 90941950 ctagaGGATATAGACAATAAAGAATCTTAATCTTTAGATATATGATTAAGATATCTC-ACCTAGGTTCTGCTGAAATCATGCCCAGGTCTAGTTTAAATAATCAGCTCTTCggaaaaatgtcaaaataatttaa-tatttgaattataACTCT---TATACTTTATCTTGTCTTTTACCCATTtctttctgtaaattttttttaattgttgtaatTTGAAGACTAGTAACTTAGTCAaaccaaaatttgaaataatactgat i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18624197 257 + 33263144 CTAGAGGATATAGACAATAAAGAATCTTAATCTTTAGATATATGATTAACATATCTC-ACCTAGGTTCTGCTGAAATCATGCCCAGGTCTAGCTTAAATAATCAGCTCTTCGGAAAAATGTCAAAATAATTTAA-TATTTGAATTATAACTCT---TATACTTTATCTTGTCTTTTACCCATTTCTTTCTGTAAAATTTTTTTAATTGCTGTAATTTGAAGACTAGTAACTTAGTCAAACCAAAATTTGAAATAATACTGAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198324744 249 + 210400635 CTAGAGGATATGGACAACAAACAATCTTAATCTTTAGATATATGATTAAAATATCTT-AGCTAGGTTCTGCCAAAACCATGCCCAGGTCTGGCTTAAATAATCAGCTCTTCAGAAAAATGTCAAAACAACTTCA-TATTTGAATTATAACTCT---TATATTTTATCTTGCCTTTTAACCACTTCTTTCTGTAACAT-TTTTTAATTGTTATACTTTGAAG-------ACTTAGTCAAACCAAAATTCAAAATAATACTGAT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40946765 240 - 69331447 CTGGAGGATAGAAATGATAATCAATCTTATTC------------------ATGTCTTAACCTAGATTCTGCCAAAACTGTGCCCAGGTCTAGTTTAAATAAATAGCCCCTCAGAAAAATGGCAAAATAATTCAATTATTTGAATGATAACTCCATGTATACTACTTCTTGCCCTTTGACTCATCTCCTGTAAAAAAAAATTCAAATTGTTATAT----AAGACCAGTAACTTAGTCAAGCTAAAATTCTAAAAAATACTTAT i canFam3.chr10 I 43 I 11 e mm10.chr15 77165209 229 + 104043685 I a score=1151730.000000 s hg38.chr22_KI270876v1_alt 175864 403 + 263666 GG-AAAAAAAAAGGAGAATCTTTTACCTATAAGACAAAACACACTACA-AAAAATCAAATTATAAACTTGAAAGGTTTCTCTCTCTTTTCTTGATATGGTCTTTCTTCAGAATAATGTAGCCTCAGTTATTAACAGAAAGAAATTCCATGCATGGATCAATAGCTCAACATCATTCTTTCAGTATTTTTCCCATTTATCAAAATGATTTTAAAAATAGAAACAAAAAATGAAAATATTTTCAACTCAGAAATTACTCCTGAGTCCCCTCCCTCATCAGAAAAGACTGGGTATTTCCTTAAAATTTTAAATAATATATTTACTCAAAAATTCTAGAAATAAAAAGACTAATTTTCCACAATAAACTCAAGAGTTATTGGCTGATGATGCCAATCTATTCCACTTTC s panTro4.chr22 34554187 403 + 49737984 GGAAAAAAAAAAGGAGAATCTTTTACCTATAAGACAAAACACACTACA-AAAAATCAAATTATAAACTTGAAAGGTTTCTCTCTCTTTTCTTGATATGGTCTTTCTTCAGAATAATGTAGCCTCAGTTATTAACAGAAAGAAATTCCATGCATGGATCAATAGCTCAACATCATTCTTTCAGTATTTTCCCCATTTATCAAAATGATTTTAAAAATAGAAACAAAAAATGAAAATATTTT-AACTCAGAAATTACTCCTGAGTCCCCTCCCTCATCAGAACAGACTGGGTATTTCCttaaaattttaaataatatatttaCTCAAAAATTCTAGAAATAAAAAGACTAATTTTCCACAATAAACTCAAGAGTTATTGGCTGATGATGCCAATCTATTCCACTTTC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30967648 402 + 46535552 GG--AAAAAAAAGGAGAATCTTTTACCTATAAGACAAAACACACTACA-AAAAATCAAATTATAAACTTGAAAGGTTTCTCTCTCTTTTCTTGATATGGTCTTTCTTCAGAATAATGTAGCCTCAGTTATTAACAGAAAGAAATTCCATGCATGGATCAATAGCTCAACATCATTCTTTCAGTATTTTTCCCATTTATCAAAATGACTTTAAAAATAGAAACAAAAAATGAAAATATTTTCAACTCAGAAATTACTCCTAAGTGAGTCCCCTCATCAGAACAGACTGGGTATTTTCttaaaattttaaataatatatttaCTCAAAAATTCTAGAAATAAAAAGACTGATTTTCCACAATAAACTCAAGAGTTATTGGCTGATGATGCCAGTCTATTCCACTTTC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100525486 398 - 115148730 GG-GAAAAAAAAGGAGAATCTTTTACCTATAAGACAAAGCACACTACA-AAAAATCAAATTATAAACTTGAAAGGTTTCTCTCTCTTTTCTTGATATGGTCTTTCTTCAGAATAATGTAGCCTCAGTTATTAACAGAAAGAAATTCCATGCATGGATCAACAGCTCAACACCATTCTTTCAGTATTTTTCCCATTTATC-AAATGACTTTAAAAATAGAAACAAAAAATGAAAATATTTTCAACTCAGAAATTACTCCTGAGTA----CCCTCATCAGAACAGACTAGGTATTTCCTTAAAATTTTAAATAATATATTTACTCAAAAATTCTAGAAATAAAAAGACAGATTTTCCACAATAAACTCAAGAGTTATTGGCTGATGATGCCAATCTATTCCACTTTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80673081 394 + 95678458 GG---AAGAAAAAAATAATCTTTTACCTATAAGACAAAACACACTATA-AAAAATCAAATTATAAACTTGAAGGGTTTCTTTCTCTTTTCTTAATATGGTCTTTCTTCAGAATAATGTAGCCTCAGTTATTAACAGAAAGAAATTCCATGCATGGATCAATAGCTCAACATCATTCTTTCAGTATTTTTCCCATTTATCAAAATGACTTTAAAAATAGAAACAAAAAATGAAAATATTTTCAACTCAGAAATTA---CTAAATGAGTTCCCTCATCAGAACAGAC----TATTTCCTCaaaattttaaatattatatttaCTCAAAAATTATAGAAACAAAAGGACTGATTTTCCACAATAAACTCAAGAGTTATTGGCTGATGATGCCAATCTATTCCACTTTC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81099128 394 - 96509753 GG---AAGAAAAAAATAATCTTTTACCTATAAGACAAAACACACTACA-AAAAATCAAATTATAAACTTGAAGGGTTTCTTTCTCTTTTCTTAATATGGTCTTTCTTCAGAATAATGTAGCCTCAGTTATTAACAGAAAGAAATTCCATGCATGGATCAATAGCTCAACATCATTCTTTCAGTATTTTTCCCATTTATCAAAATGACTTTAAAAATAGAAACAAAAAATGAAAATATTTTCAACTCAGAAATTA---CTAAATGAGTTCACTCATCAGAACAGAC----TATTTCCTCAAAATTTTAAATATTATATTTACTCAAAAATTATAGAAACAAAAGGACTGATTTTCCACAATAAACTCAAGAGTTATTGGCTGATGATGCCAATCTATTCCACTTTC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76356598 394 + 90941950 gg---aagaaaaaaataatcttttaccTATAAGACAAAACACactaca-aaaaatcaaattataaacttgaagggtttctttctcttttcttaatatGGTCTTTCTTCAGAATAATGTAGCCTCAGTTATTAACAGAAAGAAATTCCATGCATGGATCAATAGCTCAACATcattctttcagtatttttcccatttatcaaaatgactttaaaaatagaaacaaaaaatgaaaatattttcaactcagAAATTA---CTAAATGAGTCCCCTCATCAGAACAGAC----TAtttcctcaaaattttaaatattatatttactcAAAAATTATAGAAACAAAAGGACTGATTTTCTACAATAAACTCAAGAGTTATTGGCTGATGATGCCAATCTATTCCACTTTC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18624454 394 + 33263144 GG---AAGAAAAAAATAATCTTTTACCTATAAGACAAAACACACTACA-AAAAATCAAATTATAAACTTGAAGGGTTTCTTTCTCTTTTCTTGATATGGTCTTTCTTCAGAATAATGTAGCCTCAGTTATTAACAGAAAGAAATTCCGTGCATGGATCAGTAGCTCAACATCATTCTTTCAGTATTTTTCCCATTTATCAAAATGACTTTAAAAATAGAAACAAAAAATGAAAATATTTTCAACTCAGAAATTA---CTAAATGAGTCCCCTCATCAGAACAGAC----TATTTCCTCAAAATTTTAAATATTATATTTACTCAAAAATTATAGAAACAAAAGGACTGATTTTCCACAATAAACTCAAGAGTTATTGGCTGATGATGCCAATCTATTCCACTTTC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198324993 390 + 210400635 GG----CAAAAAAGTGAATCTTTCACCTATAAGACAAAACATAATACAGAAAAATCAAATTATACATTTGAAGGGTTTCTCTCTCCTTTCTTGATATACTCTTTCTTCAGAATAATGTAGCCTCAGTTATTAACAGAAAGAAATTACATGGATGGATCAGTAACTCAG---CATTGTTTCAGTATTGTTCCCATTTATCAAAATGATTTTAAAAATAGAAACAAAAAATGAAAATATTTTCAACTCAGAATTTACTCCTAAGTGATTCTCCTCATCGGAATAGACTCGGTATTTCCTTAAAATTTTAAATAATAT-----CTCAAAAATTCTAGAAATAAAAGGACTGATTTCCCACAGTAAACTCTAGAGTTATTGGC---TAATGCCAATCTATTCCACcctc i calJac3.chr1 C 0 I 732 e mm10.chr15 77165209 229 + 104043685 I e canFam3.chr10 40947005 11 - 69331447 I a score=377735.000000 s hg38.chr22_KI270876v1_alt 176267 136 + 263666 AAGTTTACACTCTACAATATTATGGATGCTTTTATAGTATTAAAGTTCATGTGTCCTGATCAATAAAAAACATGAATTCAGAAAATAGTCCTTCATGTATATTTCCATACATCTCTTTAGCAAAGACATGCAA--TAC s panTro4.chr22 34554590 136 + 49737984 AAGTTTACACTCTACAATATTATGGATGCTTTTATAGTATTAAAGTTCATGTGTCCTGATCAATAAAAAACATGAATTCAGAAAATAGTCATTCATGTATATTTCCATACATCTCTTTAGCAAAGACATGCAA--TAC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30968050 136 + 46535552 AAGTTTACACTCTACGATATTATGGATGCTTTTATAGTATTAAAGTTAATGTGTCCTGATCAATAAGAAACATGAATTCAGAAAACAGTCCTTCATGTATATTTCCATACATCTCCTTAGCAGAGACATGAAA--TAC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100525884 136 - 115148730 AAGTTTATACTCTACAATGTTATGGATGCTTTTATAGTATTAAAGTTCATGTGTCCTGATCAATAAGAAACATGAATTCAGAAAATAGTCCTTCATGTATATTTCCATACATCTCTTTAGCAGAGACATACAA--TAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80673475 136 + 95678458 AAGCTTACACTCTGCAGTATTATGGATGCCTTTATAGTATTAAAGTTCATGTGTCCTGATCAATAACACACATGAATTCAGAAAACAGTCCTTCATGTATATTTCCATACATCTCTTTAGCAGAGACATGCAA--TAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81099522 136 - 96509753 AAGCTTACACTCTGCAGTATTATGGATGCCTTTATAGTATTAAAGTTCATGTGTCCTGATCAATAACACACATGAATTCAGAAAACAGTCCTTCATGTATATTTCCATACATCTCTTTAGCAGAGACATGCAA--TAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76356992 136 + 90941950 AAGCTTACACTCTGCAGTATTATGGATGCCTTTATAGTATTAAAGTTCATGTGTCCTGATCAATAAGACACATGAATTCAGAAAACAGTCCTTCATGTATATTTCCATACATCTCTTTAGCAGAGACATGCAA--Tat i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18624848 134 + 33263144 AAGCTTACA--CTGCAGTATCATGGATGCCTTTATAGTATTAAAGTTCATGTGTCCTGATCAATAAGAAACATGAATTCAGAAAACAGTCCTTCATGTATATTTCCATACATCTCTTTAGCAGAGACATGCAA--TAT i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40947016 132 - 69331447 AAGTACACACTTTGCAATATTATGAATGCTTTTATAGTAGTAAAGTCTTTGTGTATTGACCAAT------TATAAATACAGAAAATGGCCTTTCACATATATTTCTATGCATCTCTTTAGTAAAGACACACAGACTAC i canFam3.chr10 I 11 C 0 e mm10.chr15 77165209 229 + 104043685 I e calJac3.chr1 198325383 732 + 210400635 I a score=467200.000000 s hg38.chr22_KI270876v1_alt 176403 209 + 263666 CAATTCAC--------------ttttttttt---ctgagacggggtctc-actctgtcacccaggttggagtgctatggcacaatctcagctcactgcaacctctgccttctaggttcaaggatcctcccacttc-----------------------aacctcccaagtagatggaactacaggcgcatgtcatggctcctggctaattttttcaactttttttgtagacatggagctttgccatgttg s panTro4.chr22 34554726 208 + 49737984 CAATTCAC--------------ttttttttt---ctgagacggggtctc-actctgtcacccaggttggagtgctatggcacaatctcagctcactgcaacctctgccttctaggttcaaggatcctcccacttc-----------------------aacctcccaagtagatggaactacaggcgcatgtcatggctcctggctaattttttcaac-ttttttgtagacatggagctttgccatgttg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30968186 209 + 46535552 CAATTCAC--------------ttttttttt--cctaagacgaggtctc-actctgtcacccaggttggagtgctatggcacgatctcagctcactgcaacctctgccttctaggttcaaggatcctcccacttc-----------------------aacctcccaagtagctggaactacaggtgcatgtcacggcgcctggctaattttttcaac-ttttttgtagacatggagctttgccatgttg i ponAbe2.chr22 C 0 M 524 s nomLeu3.chr7b 100526020 211 - 115148730 CAATTCAC--------------ttttttttttttttgagatggggtctc-actctgtcacccaggttggagtgctatggcacgatctcagctcactgcaacctctgccttctaggttcaaggatcctcccacttc-----------------------aacctcccaagtagctggaactacaggcgcatgtcacagcacctggctaattttttcaac-ttttttgtagatatggagctttgccatgttg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80673611 219 + 95678458 CAATGCAC------ttttttttttttttttttttttgagacggggtctcaactctgtca-ccaagttggagtgctgtggcatgatctcagctcactgcaccctctgtcttccaggttccaggatcctcccacctc-----------------------agcctcccaagtagctaggactacaggtgcatgccatggcacctggctaattttttcaac-ttttttgtagagatggagctttgccatgttg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81099658 240 - 96509753 CAATGCAC---------tttttttttttttttttttgagacggggtctcaactctgtcacccaagttggagtgctgtggcatgatctcagctcactgcaccctctgtcttccaggttcaaggatcctcccacctcagcctcccaagtagctgggactaagcctcccaagtagctaggactacaggtgcatgccatggcacctggctaattttttcaac-ttttttgtagagatggagctttgccatgttg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76357128 238 + 90941950 caattcac----------ttttttttttttttttttgagacggggtctc-actctgtcacccaggttggagtgctgtggcatgatctcagctcactgcaccctctgtcttccaggttcaaggatcctcccacctcagcctcccaagtagctgggactaagcctcccaagtagctaggactacaggtgcatgccatggcacctggctaattttttcaac-ttttttgtagagatggagctttgccatgttg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18624982 248 + 33263144 CAATTCACttttttttttttttttttttttttttttgagacggggtctc-actttgtcacccaggttggagcgctgtggcacgatctcagctcactgcaccctccgtcttccaggttcaaggatcctcccacctcagtctcccaagtagctggcactaagcctcccaagtagctaggactacaggtgcatgccatggcacctggctaattttttcaac-ttttttgtagagatggagctttgccatgttg i chlSab2.chr19 C 0 C 0 e mm10.chr15 77165209 229 + 104043685 I e canFam3.chr10 40947148 0 - 69331447 C e calJac3.chr1 198325383 732 + 210400635 I a score=138100.000000 s hg38.chr22_KI270876v1_alt 176612 72 + 263666 cccaggctggtcttcaactcctgagttcaggcgatccacctgcctcagcctcccaaagtgctgggattatgg s panTro4.chr22 34554934 72 + 49737984 cccaggctggtcttcaactcctgagttcaggtgatccacctgcctcagcctcccatagtgttgggattaTGG i panTro4.chr22 C 0 M 544 s nomLeu3.chr7b 100526231 72 - 115148730 cccaggctggtcttcaactcctgagttcacgggatccacctgcctcagcctcccaaagagctgggattatgg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80673830 72 + 95678458 cccaggctggtcttcaactcctgagttcaggcgatccacctgcctcagcctcccaaagtgctgggattatgg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81099898 72 - 96509753 cccaggctggtcttcaactcctgagttcaggcgatccacctgcctcagcctcccaaagtgctgggattatgg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76357366 72 + 90941950 cccaggctggtcttcaactcctgagttcaggcgatccacctgcctcagcctcccaaagtgctgggattatgg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18625230 72 + 33263144 cccaggctggtcttcaactcctgagttcaggcgatccacctgcctcagcctcccaaagtgctgggattacgg i chlSab2.chr19 C 0 C 0 e mm10.chr15 77165209 229 + 104043685 I e canFam3.chr10 40947148 0 - 69331447 C e calJac3.chr1 198325383 732 + 210400635 I e ponAbe2.chr22 30968395 524 + 46535552 M a score=35386.000000 s hg38.chr22_KI270876v1_alt 176684 29 + 263666 gtgtgagccagcatgcccagccCCAATTC s nomLeu3.chr7b 100526303 29 - 115148730 gtgtgagccaacatgcccATACTCCATTC i nomLeu3.chr7b C 0 M 100 s rheMac3.chr10 80673902 29 + 95678458 gtgtgagccaccatgcccagccCCAGTTC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81099970 29 - 96509753 gtgtgagccaccatgcccagccCCAGTTC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76357438 29 + 90941950 gtgtgagccaccatgcccagccccagttc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18625302 29 + 33263144 gtgtgagccaccatgcccagccCCAGTTC i chlSab2.chr19 C 0 C 0 e mm10.chr15 77165209 229 + 104043685 I e canFam3.chr10 40947148 0 - 69331447 C e calJac3.chr1 198325383 732 + 210400635 I e ponAbe2.chr22 30968395 524 + 46535552 M e panTro4.chr22 34555006 544 + 49737984 M a score=45366.000000 s hg38.chr22_KI270876v1_alt 176713 50 + 263666 ATTTTTCAACATAAGTTTTAACACTTGggtcgggcacagtgggtcacacc s rheMac3.chr10 80673931 50 + 95678458 ATTTTTCAACATAAATTTTAACACTTGggtcgagcacagtgggtcacgcc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81099999 50 - 96509753 ATTTTTCAACATAAATTTTAACACTTGggtcgagcacagtgggtcacgcc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76357467 50 + 90941950 atttttcaacataaattttaacACTTGGGTCGAGCatagtgggtcacgcc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18625331 50 + 33263144 ATTTTTCAACATAAATTTTAACACTTGggtcgagcacagtgggtcacgcc i chlSab2.chr19 C 0 C 0 e mm10.chr15 77165209 229 + 104043685 I e canFam3.chr10 40947148 0 - 69331447 C e calJac3.chr1 198325383 732 + 210400635 I e ponAbe2.chr22 30968395 524 + 46535552 M e panTro4.chr22 34555006 544 + 49737984 M e nomLeu3.chr7b 100526332 100 - 115148730 M a score=81448.000000 s hg38.chr22_KI270876v1_alt 176763 59 + 263666 tgtaatcccagcccactgggaggctcaggcaggcggactgcctaagtcaaagagttcaa s nomLeu3.chr7b 100526432 59 - 115148730 tgtaatctcagcccattgggaggctcaggcaggcggactgcctgagtcaaagagttcaa i nomLeu3.chr7b M 100 C 0 s rheMac3.chr10 80673981 59 + 95678458 tgtaatcccagcccactgggaggctcaggcaggcagactgcctgagtcaaagagttcaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81100049 59 - 96509753 tgtaatcccagcccactgggaggctcaggcaggcagactgcctgagtcaaagagttcaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76357517 59 + 90941950 tgtaatcccagcccactgggaggctcaggcaggcagactgcctgagtcaaagagttcaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18625381 59 + 33263144 tgtaatcccagcccactgggaggctcaggcaggcagactgcctgagtcaaagagctcaa i chlSab2.chr19 C 0 C 0 e mm10.chr15 77165209 229 + 104043685 I e canFam3.chr10 40947148 0 - 69331447 C e calJac3.chr1 198325383 732 + 210400635 I e ponAbe2.chr22 30968395 524 + 46535552 M e panTro4.chr22 34555006 544 + 49737984 M a score=66633.000000 s hg38.chr22_KI270876v1_alt 176822 40 + 263666 gaccagcctgggcaacatggcaaagctccatctctac----------------------cca s nomLeu3.chr7b 100526491 40 - 115148730 gaccagcctgggcaacatggcaaagctccatctctac----------------------cca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80674040 40 + 95678458 gaccagcctgggcaacatggtaaagctccatctctac----------------------cca i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81100108 40 - 96509753 gaccagcctgggcaacatggtaaagctccatctctac----------------------cca i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76357576 40 + 90941950 gaccagcctgggcaacatggtaaagcTCCATCTCtac----------------------cca i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18625440 40 + 33263144 gaccagcctgggcaacatggtaaagctccatctctac----------------------cca i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198326115 62 + 210400635 gagcagccaggacaccatggcaaggctccatttctacaacatattaaaaaaaaaattagcca i calJac3.chr1 I 732 C 0 e mm10.chr15 77165209 229 + 104043685 I e canFam3.chr10 40947148 0 - 69331447 C e ponAbe2.chr22 30968395 524 + 46535552 M e panTro4.chr22 34555006 544 + 49737984 M a score=37451.000000 s hg38.chr22_KI270876v1_alt 176862 15 + 263666 ggcctggtggcacat s panTro4.chr22 34555550 15 + 49737984 ggcctggtggcacat i panTro4.chr22 M 544 C 0 s nomLeu3.chr7b 100526531 15 - 115148730 ggcctggtggcatac i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80674080 15 + 95678458 ggcctggtggcacat i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81100148 15 - 96509753 ggcctggtggcacat i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76357616 15 + 90941950 ggcctggtggcacat i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18625480 15 + 33263144 ggcctggtggcacat i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198326177 15 + 210400635 gacctggtggcacac i calJac3.chr1 C 0 C 0 e mm10.chr15 77165209 229 + 104043685 I e canFam3.chr10 40947148 0 - 69331447 C e ponAbe2.chr22 30968395 524 + 46535552 M a score=202039.000000 s hg38.chr22_KI270876v1_alt 176877 66 + 263666 gcctgtagtcccaggtactcgggaggctgaggtgggaagactgcttaagcctaggaggtggaggtt s panTro4.chr22 34555565 66 + 49737984 gcctgtagtcccaggtactcgggaggctgaggtgggaagactgcttaagcctaggaggtggaggtt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30968919 66 + 46535552 gcctgtagtctcaggtacttgggaggctgaagtgggaagattgcttaagcctaggaggtggaggtt i ponAbe2.chr22 M 524 C 0 s nomLeu3.chr7b 100526546 66 - 115148730 gcctgtagttccaggtactcgggaggctgaggtgggaagattgtttaagcctaggaggtggaggtt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80674095 66 + 95678458 gcctgttgtcccaggtactcgggaggctgaggtgggaagactgtttaagcctaggagttctagact i rheMac3.chr10 C 0 I 56 s macFas5.chr10 81100163 66 - 96509753 gcctgttgtcccaggtactcgggaggctgaggtgggaagactgtttaagcctaggaggtggaggtt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76357631 66 + 90941950 gcctgtagtcccaggtactcgggaggctgaggtgggaagactgtttaagcctaggaggtggaggtt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18625495 66 + 33263144 gcctgtagtcccaggtactcgggaggctgaggtgggaagactgtttaagcctaggaggttgaggtt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198326192 66 + 210400635 gcctacagtcccaggtactcggaagactgaggtgggaagagtgcttaagcctaggaggtagaggtt i calJac3.chr1 C 0 C 0 e mm10.chr15 77165209 229 + 104043685 I e canFam3.chr10 40947148 0 - 69331447 C a score=129542.000000 s hg38.chr22_KI270876v1_alt 176943 68 + 263666 gcagtgagctgagattgtgccactgaactcgagcctaggagacagagtgagactctgtctc----------ag-gaaga s panTro4.chr22 34555631 68 + 49737984 gcagtgagctgagattgtgccactgaactcgagcctaggagacagagtgagactctgtctc----------ag-gaaaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30968985 78 + 46535552 gcagtgagctgagattgtgccactgaactccagcctaggagacagagtgagactctgtctcactaaaaaaaaa-aaaaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100526612 72 - 115148730 gcagtgagctgagactgtgccactgaactccagcctaggcgacagagtgagactctgtctc------agaaaa-aaaga i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81100229 63 - 96509753 gcagtgagctgagattatgccactgaactccagcctaggcgacatagtgagactctgtctc----------ag------ i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76357697 64 + 90941950 gcagtgagctgagattatgccactgaactccagcctaggcgacagagtgagactctgtctc----------aga----- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18625561 63 + 33263144 gcagtgagctgagattatgccactgaactccagcctaggcgacagagtgagactctgtctc----------ag------ i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198326258 63 + 210400635 -----gcactgagcctgtgccactgaactccagcctaggtgacagagtgagaccctttctc----------aa-aaaaa i calJac3.chr1 C 0 C 0 e mm10.chr15 77165209 229 + 104043685 I e canFam3.chr10 40947148 0 - 69331447 C e rheMac3.chr10 80674161 56 + 95678458 I a score=24077.000000 s hg38.chr22_KI270876v1_alt 177011 10 + 263666 -----aaaaaaaaaa s panTro4.chr22 34555699 10 + 49737984 -----aaaaaaaaaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30969063 10 + 46535552 -----aaaaaaaaaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100526684 10 - 115148730 -----aaaaaaaaaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80674217 10 + 95678458 -----AGGAAAAAAA i rheMac3.chr10 I 56 C 0 s macFas5.chr10 81100292 10 - 96509753 -----aggaaaaaaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76357761 10 + 90941950 -----ggaaaaaaaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18625624 10 + 33263144 -----aggaaaaaaa i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198326321 15 + 210400635 aaaaaaaaaaaGAGA i calJac3.chr1 C 0 C 0 e mm10.chr15 77165209 229 + 104043685 I e canFam3.chr10 40947148 0 - 69331447 C a score=1643403.000000 s hg38.chr22_KI270876v1_alt 177021 509 + 263666 aaGTTTCAACACTTAGCACACTTAGAATGTCTGTTGAACAGAAATTTAATGATATCAGGGAGAAACagacctagacttagaaacagacctagttattcaaaatctagacctagaaatagacctCGTATTTAAGAGTGAGATATTTAGAAATTATCATGAGATTTGTAAGGTTTAAGTTTTGCTAAGGATAAGGTAA-------------ATCAGTCTCATGCCAGAGG------ACATGGTTGATGATGCTGTAGTGTTATCTGTACACCGACATACAACCCTTGGGATCTCAAGACTTAGCAAGCACTGGTTAAGTTCAGTCAATCAAATTAACCAGAAAATATTTAAGATTCTTTTCCTCCTCTCCTATTCTCTCATTCCTGTTTTCTTCTCTCTTTTTCTTTCCCTTCTGCCCATGCCACAATCCTGCCA--AATGTTTAAGGATATT--AGC----TATGCCTCAGGGTAGAATGCTTTAGCAAAGATTGCCGAGA--TTTCTGC-CTGAGGTATAAATTTGGTTTTAGTCACAG s panTro4.chr22 34555709 509 + 49737984 aaGTTTCAACACTTAGCACACTTAGAATGTCTGTTGAACAGAAATTTAATGATATCAGGGAGAAACAGACCTAGACTTAGAAACAGACCTAGTTATTCAAAATCTAGACCTAGAAATAGACCTCGTATTTAAGAGTGAGATATTTAGAAATTATCATGAGATTTGTAAAGTTTAAGTTTTGCTAAGGATAAGGTAG-------------ATCAGTCTCATGCCAGAGG------ACATGGTTGATGATGCTGTAGTGTTATCTGTACACCGACATACAACCCTTGGGATCTCAAGACTTACCAAGCACTGGTTAAGTTCAGTCAATCAAATTAACCAGAAAATATTTAAGATTCTTGTCctcctctcctattctctcattcctgttttcttctctctttttctttcccttcTGCCCATGCCACAATCCTGCCA--AATGTTTAAGGATATT--AGC----TATGCCTCAGGGTAGAATGCTTTAGCAAAGATTGCCAAGA--TTTCTGC-CTGAGGTATAAATTTGGTTTTAGTCACAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30969073 509 + 46535552 aaGTTTCAACACTTAGCACACTTAGAATGTCTGTTGAACAGAAATTTAATGATATCAGGGAGAAACAGACCTAGACTTAGAAACAGACCTAGTTATTCAAAATCTAGACCTAGAAATAGACCTCGTATTTAAGAGTGAGATATTTAGAAATTATCATGAGATTTGTAAAGTTTAAGTTTTGCTAAGGATAAGGTAG-------------ATCAGTCTCATGCCAGAGG------ACATGGTTGGTGATGCTGTAGTGTTATCTGTACACTGACATACAACCCTTGGGATCTCAAGACTTACCAAGCACTGGTTAAGTTCAGTCAATCAAATTAACCAGAAAATATTTAAGATTCTTGTCctcctctcctattctctcattcctgttttcttctctctttttctttcccttcTGCCTATGCCACAATCCTGCCA--AATGTTTAAGGATATT--AGC----TATGCCTCAGGGTAGCATGCTTTAGCAAAGATTGCTGAGA--TTTCTGC-CTGAGGTATAAATTTGGTTTTAGTCGCAG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100526694 509 - 115148730 aaGTTTCAACACTTAGCACACTTAGAATGTCTGTTGCACAGAAATTTAATGATATCAGGGAGAAACagacctagacttagaaacagacctagttattcaaaatctagacctagaaatagacctCGTATTTAAGAGTGAGATATTTAGAAATTATCATGAGATTTGTAAAGTTTAAGTTTTGCTAAGGATAAGGTAG-------------ATCAGCCTTATGCCAGAGG------ACATGGTTGGTGATGCTGTAGTGTTATCTGTACACCGACATACAACCCTTGGGATCTCAAGACTTACCAAGCACTGGTTAAGTACAGTCAATCAAATTAACCAGAAAATACTTAAGATTCttgtcctcctctcctattctctcattcctgttttcttctctctttttctttcccttCTGCCTATGCCACAATCCTGCCA--AATGTTTAAGGATATT--AGC----TATGCCTCAGGGTAGAATGCTTTAGCAAAGATTGCCGAGA--TTTCTGC-CTGAGGTATAAATTTGGTTTTAGTCACAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80674227 512 + 95678458 AAGTTTCAACACTTAGCACACTTAGAATGTCTGTTGAACAGAAATGTAACGATATCAGGAAGAAATAGACCTAGACATAGAAACAGACCTAGTTATTCAAAATCTAGACCTAGAAATAGACCTCATATTTAAGAGTGAGATATTTAGAAATTATCGTGAGGTTTATGAAGTTTAAGTTTTGCTAAGGATAAGGCAG-------------ATCAAGCTCATGCCAGAGGACACACACATGGTTGGTGATGCTGTAGTGGTATCTGTACATCGACATACAACCCTTGGGATCTCAAGACTTACCA--CACTGCTTACGTTCAGTCAATCAAATTAACCAGAAAATATTTAAGATTCTTGTCCTCTTCTCTTATTCTCTCATTCCTGTTTTCTTCTCTCTTTTACTTTCCCTTCTGCCTATGCCACAATCCTGCCA--AAT-TTTAAGGATATT--AGC----TATGCCTCAGGGTAGAATGTTTTAGCAAAGATTGCTGAGA--TTTCTGC-TTGAGGTATAAATTTGGTTTTAGTAGCAG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81100302 512 - 96509753 aaGTTTCAACACTTAGCACACTTAGAATGTCTGTTGAACAGAAATGTAACGATATCAGGAAGAAAtagacctagacatagaaacagacctagttattcaaaatctagacctagaaatagacctCATATTTAAGAGTGAGATATTTAGAAATTATCGTGAGATTTATGAAGTTTAAGTTTTGCTAAGGATAAGGCAG-------------ATCAAGCTCATGCCAGAGGACACACACATGGTTGGTGATGCTGTAGTGGTATCTGTACATCGACATACAACCCTTGGGATCTCAAGACTTACCA--CACTGCTTACGTTCAGTCAATCAAATTAACCAGAAAATATTTAAGAttcttgtcctcttctcttattctctcattcctgttttcttctctcttttactttcccttCTGCCTATGCCACAATCCTGCCA--AAT-TTTAAGGATATT--AGC----TATGCCTCAGGGTAGAATGTTTTAGCAAAGATTGCTGAGA--TTTCTGC-TTGAGGTATAAATTTGGTTTTAGTAGCAG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76357771 512 + 90941950 aagtttcaacacTTAGCACACTTAGAATGTCTGTTGAACAGAAATGTAACGATATCAGGAAGAAATAGACCTAGACATAGAAACAGACCTAGTTATTCAAAATCTAGACCTAGAAATAGACCTCGTATTTAAGAGTGAGATATTTAGAAATTATCGTGAGATTTATGAAGTTTAAGTTTTGCTAAGGATAAGGCAG-------------ATCAGGCTCATGCCAGAGGACACACACATGGTTGGTGATGCTGTAGTGGTATCTGTACATCGACATACAACCCTTGGGATCTCAAGACTTACCA--CACTGCTTACGTTCAGTCAATCAAATTaaccagaaaatatttaagattcttgtcctcttctcttattctctcattcctgttttcttctctcttttactttcgcttctGCCTATGCCACAATCCTGCCA--AAT-TTTAAGGATATT--AGC----TATGCCTCAGGGTAGAATGTTTTAGCAAAGATTGCTGAGA--TTTCTGC-TTGAGGTATAAATTTGGTTTTAGTAGCAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18625634 511 + 33263144 aaGTTTCAACACTTAGCACACTTAGAATGTCTGTTGAACAGAAATGTAACGATATGAGGAAGAAAtagacctagacatagaaatagacctagttattcaaaatctagacctagaaatagacctCGTATTTAAGAGTGAGATATTTAGAACTTATCGTGAGATTTATGAAGTTTAAGTTTTGCTAAGGATAAGGCAG-------------ATCAGGCT-ATGCCAGAGGACACACACATGGTTGGTGATGCTGTAGTGGTATCTGTACATCGACATACAACCCTTGGGATCTCAAGACTTACCA--CACTGCTTACGTTCAGTCAATCAAATTAACCAGAAAATATTTAAGATTCTTGTCCTCTTCTCTTATTCTCTCATTCCTGTTTTCTTCTCTCTTTTACTTTCTCTTCTGCCTATGCCACAATCCTGCCA--AAT-TTTAAGGATATT--AGC----TATGCCTCAGGGTAGAATGTTTTAGCAAAGATTGCTGAGA--TTTCTGC-CTGAGGTATAAATTTGGTTTTAGTAGCAG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198326336 474 + 210400635 GAGTTTCAACACTTAGTATACTAAGAATGTCTGTTGAACAGAAAT-TAATGATATCAGGGAGAAACAGACATAGACTTAGAAAGAGACGTGGTTATTCAAAATCTAGACCTAAAAATAGACCTGGTATTCAAAAGTGAGATATTTAGAAATGATCATGAGATTTAGACAGTTTAAGTTTTGC-------------------------------------TGCCAGAGG------ACACGGTTGGTGATGCTGTAGTGTTATCTGTACATCAAC-TACAACCCTTGTGATCTCAAGACTTACCAAGCACTGGTTAAGTCCAGTCAATCAAATTAACCAGAAAATATTTAAGATTCTTGTCCTCCTCTCCTATTCTCTCATTGCTGTTTT-------------CTTTCCCTTTTGCCTATGCCACAATCCTGCCA--AATGTTCAGGGAGATT--AGCTATGTATGCCTCAGGGTAGAATGCTTTAGCAAAGATTGCAGAGA--TTTCTCC-TTCCAGTATAAATTTGGTTTTACTAGCAG i calJac3.chr1 C 0 I 412 s canFam3.chr10 40947148 453 - 69331447 AAATTTCAACCGTCGGCATATCCATAATGTCTGTTAGAT-GGACTGTAATGTTATCAGAGAGAAATAGACCTAG------------------------------------------------TGATATTTAAGAGTGAGATATCTAGAAACTACTTTGAGATTTATGAAATTTAAGTTTTGATAAGGATAAAGTAGACAATTTACCATCATCAGTCCCATACCATAGA------ACATGATTGGTGATAATGCAATGTAATCTGTACC---ATCTACAATC---GAGGTATCAAGAGTTACCAAGTACTGG-------------------ATAGTCAGAAAATATCTGAGGttcttct-cttttctactttcttctcattctttttttcttctcttcttt-ccttcccttctcACTATGCCACAATCCTACTATGAGTGTGCGAAGATACTAGAGT----TAGGCCTCACGGTAGAATATTTAAGCACAGATTGCAAAGACCTCTCTGCTTTAAGGTATAAAATTAGTTTTAGTGACAA i canFam3.chr10 C 0 C 0 e mm10.chr15 77165209 229 + 104043685 I a score=448632.000000 s hg38.chr22_KI270876v1_alt 177530 152 + 263666 TATTCTTAGAAGGTTCCAAAGATTCTATATTACCCTGTGCACCAGGGTAAGACAGAACTTCAAAAAGAGATAGGTCAGTTCTAGAGGCCAGGAGGGGAA----AAAAAAAAAAAAAGAGCAAAAGAGCTAGGGCTTGAGCTGGAAGGATGAGGATG s panTro4.chr22 34556218 148 + 49737984 TATTCTTAGAAGGTTCCAAAGATTCTATATTACCCTGTGCACCAGGGTAAGACAGAACTTCAAAAAGAGATAGGTCAGTTCTAGAGGCCAGGAGGGGAA----AAAAAAAAA----GAGCAAAAGAGCTAGGGCTTGAGCTGGAAGGATGAGGATG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30969582 147 + 46535552 TATTCTTAGAAGGTTCCAAAGATTCTTTATTACCCTGTGCACCAGGGTAAGACAGAACTTCAAAAAGAGATAGGTCAGTTCTAGAGGCCAGGAGGGGGA----AAAAAAAA-----GAGCAAAAGAGCTAGGGCTTGAGCTGGAAGGATGAGGATG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100527203 150 - 115148730 TATTCTTAGAAGGTTCCAAAGATTCTATATTACCCTGTGCACCAGGGTAAGACAGAACTTCAGAAAGAGATAGGTCAGTTCTAGAGGCCAGGAGGGGAA----AAAAAAAAAAA--GAGCAAAAGAGCTAGGGCTTGAGCTGGAAGGATAAGGATG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80674739 153 + 95678458 TATTCTTAGAAGGTTCCAAAGATTCCATATTACCCTGTGCACCAGGGTAAGACAGAACTTCAAAAAAAGATAGGTCAGTTCTAGAGGCCAGGAGGGGGG-AAAAAAAAAAAAAA--GAGCAAAAGAGCTAGGGTTTGAGCTGGAAGGATGAGGATG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81100814 154 - 96509753 TATTCTTAGAAGGTTCCAAAGATTCCATATTACCCTGTGCACCAGGGTAAGACAGAACTTCAAAAAAAGATAGGTCAGTTCTAGAGGCCAGGAGGGGGGAAAAAAAAAAAAAAA--GAGCAAAAGAGCTAGGGTTTGAGCTGGAAGGATGAGGATG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76358283 150 + 90941950 TATTCTTAGAAGGTTCCAAAGATTCCATATTACCCTGTGCACCAGGTTAAGACAGAACTTCaaaaaaaGATAGGTCAGTTCTAGAGGccaggaaggggg----aaaaaaaaaaa--gagcaaaagagcTAGGGTTTGAGCTGGAAGGATGAGGATG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18626145 147 + 33263144 TATTCTTAGAAGGTTCCACAGATTCCATATTACCCTGTGCACCAGGGTAAGACAGAACTTCAAAAAAAGATAGGTCAGTTCTAGAGGCCAGGAGGGGGG-------AAAAAAAA--GAGCAAAAGAGCTAGGGTTTGAGCTGGAAGGATGAGGATG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198327222 131 + 210400635 TATTTTTACAAGGTTCCAAAGATTCCATATTACCATGTGCACTAGGGTAAGAC--AACTTCAAAAAG----AGGTCAGTTCTAGAGGCCAGGAGGGGAA-----------------AA--AAAAGAGCTAGGGCTTGAGCTGGAAGGATGAGGATG i calJac3.chr1 I 412 C 0 s canFam3.chr10 40947601 95 - 69331447 TAATATTAGAAGATTCCAAAGATT---------GCTGTGTAATGGGATAACATAAAAGTTAAAAAAA------------------------------------AAAAAAAAAAA--GA----------CAGGGCTTGA----GACAGATGAGGATG i canFam3.chr10 C 0 I 13 e mm10.chr15 77165209 229 + 104043685 I a score=29629.000000 s hg38.chr22_KI270876v1_alt 177682 14 + 263666 GGA-CAGGGGGTGGA s panTro4.chr22 34556366 14 + 49737984 GGA-CAGGGGGTGGA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30969729 14 + 46535552 GGA-TGAGGGGTGGA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100527353 14 - 115148730 GGA-CAGGGGCTGGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80674892 15 + 95678458 GGACCAGGGGGTGGA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81100968 15 - 96509753 GGACCAGGGGGTGGA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76358433 15 + 90941950 GGACCagggggtgga i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18626292 15 + 33263144 GGACCAGGGGGTGGA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198327353 13 + 210400635 GGA-CCGGGGATGG- i calJac3.chr1 C 0 C 0 e mm10.chr15 77165209 229 + 104043685 I e canFam3.chr10 40947696 13 - 69331447 I a score=119389.000000 s hg38.chr22_KI270876v1_alt 177696 35 + 263666 GGAGGAAGATATATATGCAGGCAAAATATGTCATT s panTro4.chr22 34556380 35 + 49737984 GGAGGAAGATATATATGCAGGCAAAATATGTCATT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30969743 35 + 46535552 GGAGGAAGATATATATGCAGGCAAAATATGTCATT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100527367 35 - 115148730 GAAGGAAGATATATATGCAGGCAAAATATGTCATT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80674907 35 + 95678458 GGAGGAAGACATATATGCAGGCAAAATATGTCATT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81100983 35 - 96509753 GGAGGAAGACATATATGCAGGCAAAATATGTCATT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76358448 35 + 90941950 ggaggaagacaTATATGCAGGCAAAATATGTCATT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18626307 35 + 33263144 GGAGGAAGACATATATGCAGGCAAAATATGTCATT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198327366 23 + 210400635 ------------GTATGTAGGCAAAATATTTCATT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40947709 35 - 69331447 AAAGAAAGATATGTATGTAGGCAAAATATGTAGTT i canFam3.chr10 I 13 C 0 e mm10.chr15 77165209 229 + 104043685 I a score=8595.000000 s hg38.chr22_KI270876v1_alt 177731 2 + 263666 AG s panTro4.chr22 34556415 2 + 49737984 AG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30969778 2 + 46535552 AG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100527402 2 - 115148730 AG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80674942 2 + 95678458 AG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81101018 2 - 96509753 AG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76358483 2 + 90941950 AG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18626342 2 + 33263144 AG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 12073581 2 - 210400635 AG i calJac3.chr1 T 55564 C 0 s canFam3.chr10 40947744 2 - 69331447 AG i canFam3.chr10 C 0 C 0 e mm10.chr15 77165209 229 + 104043685 I a score=506272.000000 s hg38.chr22_KI270876v1_alt 177733 188 + 263666 AAATATGCAACACT------------------------------------Gggccaggcacggtggctcacacctgtaatcctagcactttgggaggctgaggcgggtggattgcctgaactcaggagtttgagaccagcttgggcaacacggtgaaaccc-atctctact-aaaatac-aaaaaattagccaggcgtggccacgtgcgcctgtaatcccaactact s panTro4.chr22 34556417 189 + 49737984 AAATATGCAACACT------------------------------------Gggccaggcacggcggctcacacctgcaatcctagcactttgggaggctgaggcgggtggattgcctgagctcaggagtttgagaccagcttgggcaacacggtgaaaccccatctctact-aaaatac-aaaaaattagccaggcgtggccacgtgcacctgtaatcccaactact i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30969780 189 + 46535552 AAATATGCAACACT------------------------------------Gggccaggcacgggggctcacacctgtaatcctagcactttgggaggctgaggcgggtggattgcctgagctcaggagtttgagaccagcctgggcaacacggtgaaaccccgtctctact-aaaatac-aaaaaatgagccgggcacggccacgtgcacctgtaatcccagctact i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100527404 181 - 115148730 AAATATACAAGACT------------------------------------Gggctgggcgcggtggctcacacctgtaatcctagcactttgggaggccgaggtgggtggattgcctgagctcaggagttcgagaccagcctg--------ggtgaaaccccgtctctact-aaaatac-aaaaaattagtcgggcgtggccacgtgcgccagtaatcccagctact i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80674944 189 + 95678458 AAATATGCAAGACT------------------------------------Gggccgggtgtggtggctcacatctgtaatcctagcatgttgagaggctgaggtgggtggattgtctgagctcaggagttcaagactagcctgggcaacacggagaaaccccgtctctacg-aaaatac-aaaaaattagccgggcgtgtgcatgtgcgcctgtaatcccagctact i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81101020 189 - 96509753 AAATATGCAAGACT------------------------------------Gggccgggtgtggtggctcacatctgtaatcctagcatgttgagaggctgaggtgggtggattgtctgagctcaggagttcaagactagcctgggcaacacggtgaaaccccgtctctacg-aaaatac-aaaaaattagccgggcgtgtccatgtgcgcctgtaatcccagctact i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76358485 189 + 90941950 AAATATGCAagact------------------------------------gggccaggtgtggtggctcacatctgtaatcctagcatgttcagaggctgaggtgggtggattgcctgagctcaggagttcaagactagcctgggcaacacggtgaaaccctgtctctacg-aaaatac-aaaaaattagccgggcgtgtccatgtgcgcctgtaatcccagctact i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18626344 189 + 33263144 AAATATGCAAGACT------------------------------------Gggccgggtgtggtggctcacttctgtaatcctagcatgttgagaggctgaggtgggtggattgtctgagctcaggagttcaagactagcctgggcaacacggtgaaaccccgtctctacg-aaaatac-aaaaaattagccgggcgtgtccatgtgcgcctgtaatcccagctact i chlSab2.chr19 C 0 C 0 s calJac3.chr1 12073583 225 - 210400635 AAATATGCAAGACTGACTGACTTAGAGATCATGTAAAAATACTGCTAGTAGggccggacgcggtggctcacacctgtaatcccagcactttgggaggccgaggcgggtggatcac--gaggtctggagatcgagaccatcctggtcaacatggtgaaaccccatctctactaaaaatacaaaaaaattagcttggcacagtggcgcgtgcctgtaatcccagctatt i calJac3.chr1 C 0 n 0 e mm10.chr15 77165209 229 + 104043685 I e canFam3.chr10 40947746 0 - 69331447 C a score=309139.000000 s hg38.chr22_KI270876v1_alt 177921 127 + 263666 cgggaggttgaggcaggagaattgcctgaacccgggaggcagaggttgcagtgagccgagattgcaccactgcactccagcatgggtgacagagcgagactccgtctccaaaaggaaaaaaagagaa s panTro4.chr22 34556606 127 + 49737984 caggaggttgaggcaggagaattgcctgaacccgggaggcagaggttgcagtgagccgagattgcgccactgcactccagcatgggtgacagagcgagactccgtcttcaaaaggaaaaaaagagaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30969969 127 + 46535552 caggaggttgaggcaggagaatggcctgaacccgggaggcagaggttgcagtgagccgagattgcgccactgcactccagcatgggtgacagagcaagactccatctccaaaaggaaaaaaagagaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100527585 127 - 115148730 aaggaggttgaggcaggagaattgtttgaacccgggaggcggaggttgcagtgagccgagattgtgccactgcactccagcatgggtgacagagagagactctgtctctaaaaggaaaaaaagagaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80675133 127 + 95678458 caggaggttgaggcaggaggattgctcgaacccgggggacggaggttgcagtgagccgagattgcgccactgcactccagcatgggtgacacagcaagactctgtctccaaaagaaagaaaagagaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81101209 127 - 96509753 caggaggttgaggcaggagaattgcttgaacccgggggacggaggttgcagtgagccgagattgcgccactgcactccagcatgggtgacacagcaagactctgtctccaaaagaaagaaaagagaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76358674 127 + 90941950 caggaggttgaggcaggagaattgcttgaacctggggggcggaggttgcagtgagccgagattgcgccactgcactccagcatgggtgacacagcaagactctgtctccaaaagaaagaaaagagaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18626533 127 + 33263144 caggaggttgaggcaggagaattgcttgaacccgggaggcggaggttgcagtgagccgagattgcgccactgcactccagcatgggtgacacagcaagactctgtctccaaaagaaagaaaagagaa i chlSab2.chr19 C 0 C 0 e mm10.chr15 77165209 229 + 104043685 I e canFam3.chr10 40947746 0 - 69331447 C e calJac3.chr1 12073808 0 - 210400635 I a score=6876.000000 s hg38.chr22_KI270876v1_alt 178048 2 + 263666 ag s panTro4.chr22 34556733 2 + 49737984 ag i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30970096 2 + 46535552 ag i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100527712 2 - 115148730 ag i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80675260 2 + 95678458 ag i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81101336 2 - 96509753 ag i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76358801 2 + 90941950 ag i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18626660 2 + 33263144 ag i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198327389 2 + 210400635 AG i calJac3.chr1 C 0 C 0 e mm10.chr15 77165209 229 + 104043685 I e canFam3.chr10 40947746 0 - 69331447 C a score=532012.000000 s hg38.chr22_KI270876v1_alt 178050 150 + 263666 aaaTATGCAAGACTGACTGACTAAGGGATTGTGTGACCAGTTTACTTGACTATGGGTAGGTGGTGGCAAATGACAAGAAAAGTAGG-TAGGTTCACTATGGAAGGACTAGGACATCCTGCTACGTATTTCAGATCTGATCTTTAAAGATTG s panTro4.chr22 34556735 149 + 49737984 aaaTATGCAAGACT-ACTGACTAAGGGATCGTGTGACCAGTTTACTTGACTATGGGTATGTGGTGGCAAATGACAAGAAAAGTAGG-TAGGTTCACTATGGAAGGACTAGGACATCCTGCTATGTATTTCAGATCTGATCTTTAAAGATTG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30970098 150 + 46535552 aaaTATGCAAGACTGACTGACTAAGGGATCGTGTGACCAGTTTACTTGACTATGGGTGGGTGGTGGCAAATGACAAGAAAAGTAGG-TAGGTTCACTATGGAGGGACTAAGACATCCTGCTATGTATTTCAGATCTGATCTTTAAAGATTG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100527714 150 - 115148730 aaaTATGCAAGACTGACTGACTAAGGGATCGTGTGACCAGTTTACTTGACTATGGGTGGGTGGTGGCAAATGACAAGGAAAGTAGG-TAGGTTCACTATGGACGGACTAGGACATCCTGCTATGTATTTCAGATCTGATCTTTAAAGATTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80675262 150 + 95678458 aaaTATGCAAGACTGACTGACTAAGGGATCGTGTAACCAGTTTACCTGACTATGGGTGGGCGGTGGCAAATAACAAGAAAAGTAGG-TAGGTTCATTATGGAGGGACTAGGACATCCTGCTATGTATTTCAGATCTGATCTTTAAAGATTG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81101338 150 - 96509753 aaaTATGCAAGACTGACTGACTAAGGGATCGTGTGACCAGTTTACCTGACTATGGGTGGGCGGTGGCAAATAACAAGAAAAGTAGG-TAGGTTCATTATGGAGGGACTAGGACATCCTGCTATGTATTTCAGATCTGATCTTTAAAGATTG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76358803 150 + 90941950 aaatatgcaaGACTGACTGACTAAGGGATCGTGTGACCAGTTTACTTGACTATGGGTGGGTGGTGGCAAATAACAAGAAAAGTAGG-TAGGTTCATTATGGAGGGACTAGGACATCCTGCTATGTATTTCAGATCTGATCTTTAAAGATTG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18626662 150 + 33263144 aaaTATGCAAGACTGACTGACTAAGGGATCGTGTGACCAGTTTACTTGACTATGGGTGGGTGGTGGCAAATAACAAGAAAAGTAGG-TAGGTTCATTATGGAGGGACTAGGACATCCTGCTATGTATTTCAGATCTGATCTTTAAAGATTA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198327391 150 + 210400635 AAATATGCAAGACTGTCTGACTTAGAGATCGTGTGATCAGTTTATTTGACTATGGGTGCACTGTGGCAAATGACAAGAGAAGTAAG-TAGGTTCATTACGCAGGAACCAGGACATCCTGCTATGTATTTCAGATCAGATCTTTAAAGACTG i calJac3.chr1 C 0 I 320 s canFam3.chr10 40947746 148 - 69331447 AAATATGCAAGACTTATT---TAAGGATCAGTGTGACCAGTCTAGATGACTGTGGGTGAACAGTGGCAAATACTAAGAAAAGTAGGCTGGAATCACTGTGGAGGGTTTAGGACATCAGGCTATGTATTTTAGACCTTACCTTCAAAGACAA i canFam3.chr10 C 0 C 0 e mm10.chr15 77165209 229 + 104043685 I a score=1767503.000000 s hg38.chr22_KI270876v1_alt 178200 527 + 263666 AGCAAGAGGAAAAGAGTGCTACAT-AAATAACGTTTTGTGAAAATGGCTCTGGTGGCTGCAGGTAAGAATGAAAAAGGGAACAACCTAAAGGTGGGGAAACCAATTAGCAGCTACCATTACAAGAGGTTACAGATGACTAATGCAAAAAATACAT-ATTAGCAGTAGGAATAAAGAAGGTATAGATATATAAGAGATGACGAAGACAACATCCACAGTAATTGAAGACTGTCCACATGTAGGGTATAAGAGAAA----------------------GGTTCTAATTCTAGCTAACTAGCCAAATAAGAATAACACTGCTAATACAGACAAATCTGAAGCATAAACTGGTTTGAAGTAATGG------------TAGAGAAGGTATAACAGGTACTCGGGGTTGAAGGT-ACAG--CTAGAGGAGAGGTCAGGGTTAGACACGAAGATCAAA---GAG----AAAAGGAGAAATAGCCATGGCCATAATGGGGTTGAGATTCCTCTCCC--ACACTGATGCAGTCTGTAACATTTATTATACATCAACCATGTACTCCAAAAAAAGAAAAGTAGAG s panTro4.chr22 34556884 527 + 49737984 CGCAAGAGGAAAAGAGTGCTACAT-AAATAACGTTTTGTGAAAATGGCTCTGGTGGCTGCAGGTAAGAATGAAAAAGGGAACAACCTAAAGGTGGGGAAACCAATTAGCAGCTACCATTACAAGAGGTTACAGATGACTAATGCAAAAAATACAT-ATTAGCAGTAGGAATAAAGAAGGTATAGATATATAAGAGATGACGAAGACAACATCCACAGTAATTGAAGACTGTCCACATGTAGAGTATAAGAGAAA----------------------GGTTCTAATTCTAGCTAACTAGCCAAATAAGAATAACACTGCTAATACAGACAAATCTGAAGCATAAACTGGTTTGAAGTAATGG------------TAGAGAAGGTATAACAGGTACTCGGGGTTGAAGGT-ACAG--CTAGAGGAGAGGTCAGGGTTACACACGAAGATCAAA---GAG----AAAAGGAGAAATAGCCATGGCCATAATGGGGTTGAGATTCCTCTCCC--ACACTGATGTAGTCTATAACATTTATTAAACATCAACCATGTACTCCAAAAAAAGAAAAGTAGAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30970248 527 + 46535552 CTCAAGAGGAAAAGAGTGCTACAT-AAATAACGTTTTGTGAAAATGGCTTTGGTGGCTGCAGGTAAGAATGAAAAAGGGAACAACCTAAAGGTGGGGAAACCAATTAGCAGCTGCCATTACAACAGGTTACAGATGACTAATGCAAAAAATACAC-ATTAGCAGTAGGAATAAAGAAGGTATAGATATATAAGAGATGATGAAGACAACATCCACAGTAATTGAAGACTGTCCACATGTAGGGTATAAGAGAAA----------------------GGTTCTAATTCTAGCTAACTAGCCAAATAAGAATAACACTGCTAATACAGACAAATCTGAAGCATAAACTGGTTTGAAGTAATGG------------TAGAGAAGGTGTAACAGGTACTCGGGGTTGAAGGT-ACAG--CTAGAGGAGAGGTCAGGGTTAGACACGAAGATCAAA---GAG----AAAAGGAGAAATAGTCATGGCCATAATGGGGCTGAGATTCCTCTTCC--ACACTGATGTAGTCCACAACATTTATTAAACATCAACCATGTACTCCAAAAAAAGAAAAGCAGAG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100527864 522 - 115148730 CTCAAGAGGAAAAGAGTGCTACAT-AAATAACGTTTTGTGAAAATGGCTCTGGTGGCTGCAGGTAAGAACGAAAAAGGCAACAACCTAAAGGTGGGGAAACCAATTAGCAGCTACCATTACAACAGGTTACAGATGACTAATGCAAAAAATACAT-ATTAGCAGTAGGAATAAAGAAGGTATAGATATATAAGAGATGATGAAGACAACATCCACAGTAATTGAAGACTGTCCACATGTAGGGTATAAGAGAAA----------------------GGTTCTAATTCTAGCTAACTAGTCAAATAAGAACAACACTGCTAATACAGACAAATCTGAAGCATAAATTGGTTTGAAGTAATGG------------TAGAGAAGGTATAACAGGTACTCGGGGTTGAAGGT-ACAG--CTAGAGGAGAGGTCAGGGTTAGACACGAAGATCAAA---GAG----AAAAGGAGAAATAGCCATGGCCATAATGGGGTTGAGATTCCTCTCCC--ACACTGATGTAGTCCACAACATTTATTAAACATCAACCATGTACTCCAAAAAAAGA-----AGAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80675412 527 + 95678458 CGCAAGAGGAAAAGAGTGCTACAT-AAATAACGTTTTATGAAAATGGCTCTGGTGGCTGCAGGTAAGAACAAAAAAGGGAACTACCTAAAGGTGCGGAGACCAATTAGCGGCCACCATGACAACAGGTTACAGATGACTAATGCAAAAAATTCAT-ATTCGCAGTAGGAATAAAGAAGGTATAGATATATAAGAGATGACGAAGACAACATCCACAGTAATTGAAGACTGTCCACATGCAGGGTATAAGAGAAA----------------------GGTTCTAATTCTAGCTGACTAGCCAAATAAGAATAACACTGCTAATACAGACAAATTTGAAGCATAAACTGGTTTGAAGTAATGG------------TAGAGAAAGTCTAACAGGTACTCAGAGTTGAAGGT-ACAG--CTAGAGGAGAGGTCAGGGTTAGACAAGAAGATCAAA---GAG----AAAAGGAGAAAAACGCATGGCCATAATGGGGTTGAGATTCCTCTCCC--ACACTGATGTAGTCCACAACATTTATTAAACGTCAAACATGTACTCCAAAAAAAGAAAAGTAGAG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81101488 520 - 96509753 CGCAAGAGGAAAAGAGTGCTACAT-AAATAACGTTTTATGAAAATGGCTCTGGTGGCTGCAGGTAAGAACAAAAAAGGGAACTACCTAAAGGTGCGGAGACCAATTAGCGGCCACCATGACAACAGGTT-------ACTGATGCAAAAAATTCAT-ATTCGCAGTAGGAATAAAGAAGGTATAGATATATAAGAGATGACGAAGACAACATCCACAGTAATTGAAGACTGTCCACATGCAGGGTATAAGAGAAA----------------------GGTTCTAATTCTAGCTGACTAGCCAAATAAGAATAACACTGCTAATACAGACAAATTTGAAGCATAAACTGGTTTGAAGTAATGG------------TAGAGAAAGTCTAACAGGTACTCAGAGTTGAAGGT-ACAG--CTAGAGGAGAGGTCAGGGTTAGACAAGAAGATCAAA---GAG----AAAAGGAGAAAAACGCATGGCCATAATGGGGTTGAGATTCCTCTCCC--ACACTGATGTAGTCCACAACATTTATTAAACGTCAAACATGTACTCCAAAAAAAGAAAAGTAGAG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76358953 527 + 90941950 CGCAAGAGGAAAAGAGTGCtacat-aaataatgttttatgaaaatgGCTCTGGTGGCTGCAGGTAAGAACAAAAAAGGGAACTACCTAAAGGTGCGGAGACCAATTAGCGGCCACCATGACAACAGGTTACAGATGACTAATGCAAAAAATTCAT-ATTTGCAGTAGGAATAAAGAAGGTATAGATATATAGGAGATGACGAAGACAACATCCACAGTAATTGAAGACTGTCCACATGCAGGGTATAAGAGAAA----------------------GGTTCTAATTCTAGCTGACTAGCCAAATAAGAATAACACTGCTAATACAGACAAATTTGAAGCATAAACTGGTTTGAAGTAATGG------------TAGAGAAAGTCTAACAGGTACTCAGAGTTGAAGGT-ACAG--CTAGAGGAGAGGTCAGGGTTACACACCAAGatcaaa---gag----aaaaggagaaaaacgcATGGCCATAATGGGGTTGAGATTCCTCTCCC--ACACTGATGTAGTCCACAACATTTATTAAACGTCAAACATGtactccaaaaaaagaaaagtagag i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18626812 527 + 33263144 CGCAAGAGGAAAAGAGTGCTACAT-AAATAACGTTTTATGAAAATGGCTCTGGTGGCTGCAGGTAAGAACAAAAAAGGGAACTACCTAAAGGTGCGGAGACCAATTAGCGGCCACTATTACAACAGGTTACAGATGACTAATGCAAAAAATTCAT-ATTCGCAGTAGGAATAAAGAAGGTATAGATATATAAGAGATGACGAAGACAACATCCACAGTAATTGAAGACTGTCCACATGCAGGGTATAAGAGAAA----------------------GGTTCTAATTCTAGCTGACTAGCCAAATAAGAATAACACTGCTAATACAGACAAATTTGAAGCATAAACTGGTTTGAAGTAATGG------------TAGAGAAAGTCTAACAGGTACTCAGGGTTGAAGGT-ACAG--CTAGAGGAGAGGTCAGGGTTAGACACGAAGATCAAA---GAG----AAAAGGAGAAAAACGCATGGCCATAATGGGGTTGAGATTCCTCTCCC--ACACTGATGTAGTCCACAACATTTATTAAACGTCAAACATGTACTCCAAAAAAAGAAAAGTAGAG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198327861 535 + 210400635 ATCAAGAGGGAAAGACTGCTACATAAAATAatgttttgtgaaaatggctctggtgtctgcaggtaagaacaaaaaagggaacaacctgaaggtggggggaccaattatcagctaccattacaacaggctacagatgatTAATGCACAAAATACATGATGTGCAGTAAAAATAAAGAAGGTATAGATATATAAGACATGACAAAGACAACATTCACAGTAACTGGAGACTGTCCACATGCAGGGTATAAGAGAAA----------------------GGTTCTAACTCTAGCTGACTAGCCAACTAAGAATAACACTGCTAATACAGAGAAATATAAAGCACAAACTGGTTTGAAGTAACGG------------TAGAGAATGTCTAACAGGTACTTGGGGTTGGAAGT-ACAG--CAAGAGGAGAGGTCAGGGTTAGAGATGAAGATCAAA---GAGGAGAAAAAAGAGAAATAGCCATGGCCATAATGGGGTTGAGATTTCTTCTCCCTACACTGATATAGTCCTCAACATTTATTAAACATCAGTCATGTGCTCCAAAAAAAGAAAAGTAGAG i calJac3.chr1 I 320 C 0 s canFam3.chr10 40947894 531 - 69331447 TTTGAGAAGGAAAACATGCTACAA-AATTAAAATTCTGtgaaaatggctctagtggccacagg-aagaacagaaaagtca--------------gggaagccaattagaggataaaattacaatagtctacagattattaatgcaaaa---cctt-gttagccataggaataatgaaggtatagatgtaggaaacattacaaaggcagcatccacaggaactgcagattgttcagatacagggtatgagagaaagggtaattaaatataacactatggttctgagtctagttgattggccaaataagtatcccactaataaaacaggaaaATCGGAAGTATAAACTGCTCTGAAGTTATGGCAGGACATCCAATAGGAAATGTCTAACACATACTCAGAGGTGTAGGTGGCAGCCCCAGAAGAGAGGTCAGGGTTAGAAATGAAGAGCCAACAGGAG----TATGGGAGGAACAGTCAAGGGCAGAATGTGGTT--GACTGTTCTCCC--ATACTGAATTAGTCCACAGTATTTTTC----------------TTTCAAAAAAGAAAAGATAGAG i canFam3.chr10 C 0 C 0 e mm10.chr15 77165209 229 + 104043685 I a score=2731312.000000 s hg38.chr22_KI270876v1_alt 178727 786 + 263666 ACAAAAGAAAAATGGGAGGTGGAGGGGAGAC--ACAGACA---GATAGAAGGCAAAG-GCTGAAAATAGAACCTTGAGGAATCCTTGCTTCAAGAAGGCAGAAATAGAAACAGAGGAT-AAAAAGATTAAGCATAATCGTGTACTATTCACAAAAGCCAGGAATACAGAGGACATCTGTTTCTTTTCTTCGATCTCACATCCTTTATACTAGGGAAGGTATTTCATAAATTGATATCAGAGGTGAATATATAACAATGCCAAGTAGAAATCTAGAAAGG-----TTAAAGAAAATGAGAATTTAGAAATAAATGACTGAATTTAGCAAACAAGAG--TTAAA--GAGTTT--TCAGAGCACTGTTTTAGTAATATGAGTAAAAAGAATGGTAGCAAACCTGATAAACTCATGGTCAGAATGAAAAATAGACAAAATGCCTGCATATAAATTTTAACA-AACTTTCTATTGGGA----TACTTGATTTCCAAGTGGCAATAAAGTACAAAACCAATTATTGATACATTCAACTACCCACAGTTGCCTCTATCAAGGAGAATTTTTACTTTATTTTGTTTGGTTTTGGCCTCTGTGCCTTTGATCA---TGTTTTCTTACC--CATTTCAAAATGCCCAAATCTTAAAAATG--------------CTACcttaaatgccatctgctccacaaagctcttcctgattacctccaactagaagtgatttctctttcctctgaacttatatggcattctctatTTGTTTTT-AGACATACTTATTTTATTGATTAGATGAATTCTCTAAGGATAGAACCTGTCCATCCATCTT s panTro4.chr22 34557411 786 + 49737984 ACAAAAGAAAAATGGGAGGTGTAGGGGAGAC--ACAGACA---GATAGAAGGCAAAG-GCTGAAAATAGAACCTTGAGGAATCCTTGCTTCAAGAAGGCAGAAATAGAAACAGAGGAT-AAAAAGATTAAGCATAATCGTGTACTATTCACAAAAGCCAGGAATACAGAGGACATCTGTTTCTTTTCTTCGATCTCACATCCTTTATACTAGGGAAGGTATTTCATAAATTGATATCAGAGGTGAATATATAACAATGCCAAGTAGAAATCTAGAAAGG-----TTAAAGAAAATGAAAATTTAGAAATAAATGACTGAATTTAGCAAACAAGAG--TTAAA--GAGTTT--TCAGAGCACTGTTTTATTAATATGAGTAAAAAGAATGGTAGCAAACCTGATAAACTCATGGTCAGAATGAAAAATAGACAAAATGCCTGCATATAAATTTTAACA-AACTTTCTATTGGGA----TACTTGATTTCCAAGTGGCAATAAAGTACAAAACCAATTACTGATACATTCAACTACCCACAGTTGCCTCTATCAAGGAGAATTTTTACTTTATTTTGTTTTGTTTTGGCCTCTGTGCCTTTGATCA---TGTTTTCTTACC--CATTTCAAAATGCCCAAATCTTAAAAATG--------------CTACCTTAAATGCCATCTGCTCCACAATGCTCTTCCTGATTACCTCCAACTAGAAGTGATTTCTCTTTCCTCTGAACTTATATGGCATTTTCTATTTGTTTTT-AGACATACTTATTTTATTGATTAGATGAATTCTCTAAGGATAGAACCTGTCCATCCATCTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30970775 780 + 46535552 ACAAAAGAAAAATGGGAGGTGGAGGGGAGAC--ACAGACA---GATAGAAGGCAAAG-GCTGAAAATAGAACCTTGAGGAATACTTGCTTCAAGAAGGCAGAAATAGAAACAGAGGAT-AAAAAGATTAAGCATAATCGTGTACTATTCATAAAAGCCAGGAATACAGAGGACATCTGTTTCTTTTCTTCGATCTCACATCCTTTATACTAGGGAAGGTATTTCATGAATTGATATCAGAGGTGAATATATAACAATGCCAAGTAGAAATCTAGAAAGG-----TTAAAGAAAATGAGAATTTAGAAATAAATGACTGAATTTAGCAAACAACAG--TTAAA--GAGTTT--TCAGAGCACTGTTTTAGTAATATGAGTAAAAAGAATGGTAGCAAACCTGATAAACTCACGGTCAGAATAAAAAATAGACATAATGCCTGCATATAAATTTTAACA-AACTTTCTATTGGGA----TACTTGATTTCCAAGTGGCAATAAAGTACAAAACCAATTATTGATACATTTAACTACCCACAGTTGCCTCCATCAAGGAGAATTTTTAC-----TTTGTTTTGTTTTGGCCTCTGTGCCTTTGATCA---CGTTTTCTTACC--CATTTCAAAATGCCCAAATCTT-AAAATG--------------CTACCTTAAATGCCATCTGCTCCACAATGCTCTTCCTGATTACTTCCAACTGGAAGTGATTTCTCTTTCCTCTGAACTTATATGGCATTTTCTATTTGTTTTT-AGACATACTTATTTTATTGATTAGATGAATTCTCTAAGGATAGAACCTGTCCATCCATCTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100528386 785 - 115148730 ACAAAAGAAAAATGGGAGGTGGAGGGGAGAC--ACAGACA---GACAGAAGGCAAAG-GCTGAAAATAGAACCTTGAGGAATACTTGCTTCAAGAAGGCAGAAATAGAAACAGAGGAT-AAAAAGATTAAGCATAATCATGTACTATTCACAAAAGCCAGGAATACAGAGGACATCTGTTTCTTTTCTTCGATATCACATCCTTTATACTAGGGAAGGTATTTCATAAATTGATACCAGAGGTGAATATATAACAATGCCAACTAGAAATCTAGAAAGG-----TCAAAGAAAATGAGAATTTAGAAATAAATGACTGAATTTAGCAAACAAGAG--TTAAA--GAGTTT--GCAGAGCACTGTTTTAGTAATATGCGTAAAAAGAATGGTAGCAAACCTGATAAACTCAAGGTCAGAATGAAAAATAGACATAATGCCTGCATATAAATTTTAGCA-AACTTTCCATTGGGA----TACTTGATTTCCAAGTGGCAATAAAGTACAAAACCAATTATTGGTACATTCAACTACCCACAGTTGCCTCTATCAAGGAGAATTTTTATTTTATTTTGTTTTGTTTTGGCCTCTGTGCCTTTGATCA---TGTTTTCTTACC--CATTTCAAAATGCCCAAATctt-aaaatg--------------ctaccttaaatgccatctgctccacaatgctcttcctgattacttccaactagaagtgatttctctttcctctgaacttacatggcattttctatttgttttt-agatacacttatattaTTGATTAGATGAATTCTCTAAGGATAGAACCTGTCCATCCATCTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80675939 785 + 95678458 AAAAAAGAAAAATGAGAGGTGGAGGGGAGAC--ACAGACA---GATAGAAGGCAAAG-GCTGAAAATAGAACCTTGAAGAATACTTGCTTCAAGAAGGCAGAAATAGAAACAGAGGAT-AAAAAGATTAAGCATAATCGTGTACTATTCACAAAAGCCAGGAATACAGAGGACATCTGTTTCTTTTCTTCGATCTCACATCCTTTATACTAGGGAAGGTATTTCATAAATTGATACCAGAGGAGAATATATAACAATGCCAAGTAGAAATCTAGAAAGG-----TTAAAGAAAATGACAATTGAGAAATAAATGACTGAATTTAGTAAACAAGAG--TTAAA--GAGTTT--TCAGAGCACTGTTTTAGTAATAGGAGTAAAAAGAATGGTAGCAAATCTCACAAACTCAGAGTCAGAATGAAAAATAGATATAATGCCTGCATGTAAATTTTAACA-TACTTTCTATTGGGC----TACTTGATTTCCAAGTGACAATAAAGTACAAAACCAATTATTGATACATTCAACTACCCACAGTTGCCTCTATCAAGGATAATttttattttattttgttttgttttgGCCTCTGTGCCTTTGATCA---TATTTTTTTACC--CATTTCAAAATGCCCAAATctt-aaaatg--------------ctaccttaaatgccatctgctccacaatgctcttcctgattacttccaactagaagtgatttctctttcctctgaacttacatggcactttctaattgttttt-agacatacttattttatcgattagatgaattctctaaggatagaacctgtccattcatctt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81102008 785 - 96509753 AAAAAAGAAAAATGAGAGGTGGAGGGGAGAC--ACAGACA---GATAGAAGGCAAAG-GCTGAAAATAGAACCTTGAAGAATACTTGCTTCAAGAAGGCAGAAATAGAAACAGAGGAT-AAAAAGATTAAGCATAATCGTGTACTATTCACAAAAGCCAGGAATACAGAGGACATCTGTTTCTTTTCTTCGATCTCACATCCTTTATACTAGGGAAGGTATTTCATAAATTGATACCAGAGGAGAATATATAACAATGCCAAGTAGAAATCTAGAAAGG-----TTAAAGAAAATGACAATTGAGAAATAAATGACTGAATTTAGTAAACAAGAG--TTAAA--GAGTTT--TCAGAGCACTGTTTTAGTAATAGGAGTAAAAAGAATGGTAGCAAATCTCACAAACTCAGAGTCAGAATGAAAAATAGATATAATGCCTGCATGTAAATTTTAACA-TACTTTCTATTGGGC----TACTTGATTTCCAAGTGACAATAAAGTACAAAACCAATTATTGATACATTCAACTACCCACAGTTGCCTCTATCAAGGATAATTTTTATTTTATTTTGTTTTGTTTTGGCCTCTGTGCCTTTGATCA---TATTTTTTTACC--CATTTCAAAATGCCCAAATCTT-AAAATG--------------CTACCTTAAATGCCATCTGCTCCACAATGCTCTTCCTGATTACTTCCAACTAGAAGTGATTTCTCTTTCCTCTGAACTTACATGGCACTTTCTAATTGTTTTT-AGACATACTTATTTTATCGATTAGATGAATTCTCTAAGGATAGAACCTGTCCATTTATCTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76359480 785 + 90941950 aaaaaagaaaaatgagaggtgGAGGGGAGAC--ACAGACA---GATAGAAGGCAAAG-GCTGAAAATAGAACCTTGAAGAATACTTGCTTCAAGAAGGCAGAAATAGAAACAGAGGAT-AAAAAGATTAAGCATAATCGTGTACTATTCACAAAAGCCAGGAATACAGAGgacatctgtttcttttcttcgaTCTCACATCCTTTATACTAGGGAAGGTATTTCATAAATTGATACCAGAGGAGAATATATAACAATGCCAAGTAGAAATCTAGAAAGG-----TTAAAGAAAATGACaattgagaaataaatgactgaatttaGTAAACAAGAG--TTAAA--GAGTTT--TCAGAGCACTGTTTTAGTAATAGGAGTAAAAAGAATGGTAGCAAATCTGACAAACTCAGAGTCAGAATGAAAAATAGATATAATGCCTGCATGTAAATTTTAACA-TACTTTCTATTGGGA----TACTTGATTTCCAAGTGACAATAAAGTACAAAACCAATTATTGATACATTCAACTACCCACAGTTGCCTCTATcaaggataatttttattttattttgttttgttttggcctctgtgcctttgatca---tatttttttatc--catttcaaAATGCCCAAATCTT-AAAATG--------------CTACCTTAAATGCCATCTGCTCCACAATGCTCTTCCTGATTACTTCCACCTAGAAGTGACTTCTCTTTCCTCTGAACTTACATGGCACTTTCTAATTGTTTTT-AGACATACTTATTTTATCGATTAGATGAATTCTCTAAGGATAGAACCTGTCCATTCATCTT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18627339 785 + 33263144 AAAAAAGAAAAATGAGAGGTGGAGGGGAGAC--ACAGACA---GATAGAAGGCAAAG-GCTGAAAATAGAACCTTGAGGAATACTTGCTTCAAGAAGGCAGAAATAGAAACAGAGGAT-AAAAAGATTAAGCATAATCGTGTACTATTCACAAAAGCCAGGAATACAGAGGACATCTGTTTCTTTTCTTCGATCTCACATCCTTTATACTAGGGAAGGTATTTCATAAATTGATACCAGAGGAGAAAATATAACAATGCCAAGTAGAAATCTAGAAAGG-----TTAAAGAAAATGACAATTGAGAAATAAATGACTGAATTTAGTAAACAAGAG--TTAAA--GAGTTT--TCCGAGCACTGTTTTAGTAATATGAGTAAAAAGAATGGTAGCAAATCTGACAAACTCAGAGTCAGAATGAAAAATAGACATAATGCCTGCATGTAAATTTTAACA-AACTTTCTATTGGGA----TACTTGATTTCCAAGTGACAATAAAGTACAAAACCAATTATTGATACATTCAACTACCCACAGTTGCCTCTATCAAGGATAATTTTTATTTTATTTTGTTTTGTTTTGGCCTCTGTGCCTTTGATCA---TATTTTTTTACC--CATTTCAAAATGCCCAAATCTT-AAAATG--------------CTACCTTAAATGCCATCTGCTCCACAATGCTCTTCCTGATTACTTCCAACTAGAAGTGATTTCTCTTTCCTCTGAACTTACATGGCACTTTCTAATTGTTTTT-AGACACACTTATTTTATCGATTAGATGAATTCTCTAAGGATAGAACCTGTCCATTCATCTT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198328396 769 + 210400635 AAAAAAGAAAAATAGGGGGTGGAGAGGAGAC--ACAGATA---GATAGAAGGCAAAG-GCTGAAAATAGAACATTGAGGAATACTCACTTCAAGAAGGCAGGAATAGAAACAGAGGAT-AAAAAGATTAAGTATAATCGTGTACTATTCACAAAACCCAGGGATACAGAGGATATCTGTTTCTTTTCTTCGATCTCACATCCTTTATACTAGGGAAGGTATTTCATACATTGATACCAGAGGTGAATATATAACAATGCCAAGTAGAAATCTAGAAAGG-----TTAAAGAAAATGAGAATTTGGAAATAAATGACTGAATTGAGCAAACAGGAG--TTAAA--CAGTTT--TCAGAGCATTGTTTTACTAATATGGGTAAAAAGAATGGTAGCAAATCTGATAAACTCAGGGTCAGAATGAAAAATAGACATAATGTCTGTATATAAATTTTAACA-AACTTTCTATTGGCA----TACTT-ATTTCCAAGTGGCAATGAAGTATGAAACTAATTGCTGATACATTTAACTACCCACAATTGCCTCTATCAAGGAGAGTTTTTAT----------TTTGTTTtggtctttgtgcctttgaaca---tattttcttacccacatttcaaaatgcccaaatctt-aaaatg--------------ctacctgaaatgtcatctgctccacaatgctcttcctgattacttccaaccagaagtaa--tctctctcctctgaacttacatggcactttctatttgtttttaagatatacttatct-----attaGATGAATTCTCTAAGGATAG-ACCTGTCCATTCATTTT i calJac3.chr1 C 0 C 0 s mm10.chr15 77165438 558 + 104043685 ATAACAGAAGGGTGGGAATGGGTAGAGCGAC--AC--TCA---GAGAGAAGGCAAAGAACTGTAAACAGAATCTTAAGGAATCCTGACTTCTAGAGAGCAGA-------------GAG-CACAAGATGCAGTGGGGCCCAG-AGTCCTCACAAGAGCCC-GAACACACGAGGCATTTGCTACTTTTCTGCACTC-CACATCCCTTAC----------------------------------------------CAATGCC-ACTAGCAACATGCAAAGG-----CTGAAGAGAATGA-AATTTAGAAA-AGGTTACTGCACTTCCCAGACAGGAG--CTA--------CT--TCCCAGTGCTGCTCT-GTGACAC------------TGGTACTAGGT------------GGATCAAGCGAAAAAGTAGAAACCACACCTGCATTTAAATCTCACCA-AAACGTCC-----------TGCCTTGGGCTCAGGTGG----AAAGCATAGGAC-AATCACTGGCACAATCAGTGGTCCATCCTTTTCTTTTCCAGGAAAACTTGTCACAC--------------------------------AACA---GGTTCTCCTCCT--CATGTCCA---GCAAGGATCAT----CTG--------------CTGAGTATAATGGCA--------------------------------------------------------------------GGCTCTTCCTATGTGAACCT-TGGAATACTTGT-------ATTAGATTCTTGGCTTAAGG-----ACCCATCCATTTGTCTT i mm10.chr15 I 229 I 85 s canFam3.chr10 40948425 772 - 69331447 AAGACAGATGAAAGAGAGAGAGAGAGAGAACGAACGAACAGTGGATACAAGGCACAGAGCTGAAAATAGAACCTTAAGGAATACTCACTTCTAGAAGGCAGAAATAGCAACAAAGGATAAAAAAGATTAAGCAGGATCATGTACTATTCACAAAAGCCAGG-ACATAGAGAACATCCGTTACTATTCTTCTACCCTATGTCCCTTACACTAGGGGAGGCATTTCATAAACTGATACCAGAGTTGAGTATATAGCAATGTCAAGTAGAAATACAGAGAAGTTTTTTTTTAAAAAATGAGAATGTAGGAAAGATAAACTGAATTTAGTAAATAAGGGGATCAAAACAAGTTTTGTGAGAGAGCTGCTTTTGTAATATCAGCAAAAGGA-TGGCGGTGAAATTAATAAATTCACAATCCACATGGAAAATAGACACAGTATCTGCATATAAATTTTAATACAACTATCT--TGGGATCCTTGCTTGTCTTCCAAGTGACAATAAAGTATAAAAATAATTAGTGATACATTCAACTACTCACTGTTGTCTCGGTCAAGGAGGACTGTTACCTTGTCTTGTTT--TTTTGG---CTGTGCCTTTGATCATATTGTTTTCTTACC--TATTTCAAAATGACCAAACCTT-TAAATGGATCccttccaggtctaccttc-atgctatctgttccatgaagctcttcctgattacttccagacagaagtaatttctcttctgtctgaactt-catggtattt------taccttt-ag--------------ctgactaatggcacttacta----------------------ctt i canFam3.chr10 C 0 C 0 a score=3321.000000 s hg38.chr22_KI270876v1_alt 179513 1 + 263666 C s panTro4.chr22 34558197 1 + 49737984 C i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30971555 1 + 46535552 C i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100529171 1 - 115148730 C i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80676724 1 + 95678458 c i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81102793 1 - 96509753 C i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76360265 1 + 90941950 C i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18628124 1 + 33263144 C i chlSab2.chr19 C 0 I 12 s calJac3.chr1 198329165 1 + 210400635 C i calJac3.chr1 C 0 C 0 s canFam3.chr10 40949197 1 - 69331447 t i canFam3.chr10 C 0 C 0 e mm10.chr15 77165996 85 + 104043685 I a score=21841.000000 s hg38.chr22_KI270876v1_alt 179514 12 + 263666 --CTATTTCTCACA s panTro4.chr22 34558198 12 + 49737984 --CTATTTCTCACA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30971556 12 + 46535552 --CTATTTCTCACA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100529172 12 - 115148730 --CTATTTCTCACA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80676725 12 + 95678458 --agatttctcgca i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81102794 12 - 96509753 --AGATTTCTCGCA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76360266 12 + 90941950 --AGATTTCTCGCA i papAnu2.chr10 C 0 C 0 s calJac3.chr1 198329166 12 + 210400635 --ATATTTCTCGCA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40949198 13 - 69331447 ctatgtttttagc- i canFam3.chr10 C 0 C 0 e mm10.chr15 77165996 85 + 104043685 I e chlSab2.chr19 18628125 12 + 33263144 I a score=176859.000000 s hg38.chr22_KI270876v1_alt 179526 255 + 263666 AATAATTAAGCTAAAggccaggcacggtggctcaggcctgtaatcccagcactttaggaagtcgaggtgggtggatcatttgaagtcaggagttcaagaccagcctggccaacacggtgaaaccccaactctactaaaaatacaaaaaatagctgggcgtggtggtgggcacctgtaatcctggctactcaggaggctgagacaggagaatcgcttgaacccgggaggcggaggtggcagtgaaccgagatcgtg s panTro4.chr22 34558210 255 + 49737984 AATAATTAAGCTAAAggccaggcacggtggctcaggcctgtaatcccagcactttaggaagtcgaggtgggtggatcatttgaagtcaggagttcaagaccagcctggccaacatggtgaaaccccaactctactaaaaatacaaaaaatagctgggcgtggtggtgggcacctgtaatcctggctactcgggaggctgagacaggagaatcgcttgaacccgggaggcggaggtggcagtgaaccgagatcgtg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30971568 255 + 46535552 AATAATTAAGCTAAAGTccagtcacggtggctcaggcctgtaatcccagcactttaggaagtcgaggtgggtggatcatttgaagtcaggagttcaagaccagcctggccaatgtggtgaaaccccaactctactaaaaatataaaaaacagctgggcgtggtggtgggcacctgtaatcctggctactcgggaggctgagacaggagaatcgcttgaacccgggaggcggaggtggcagtgagccgagatcgtg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100529184 252 - 115148730 AAGAATTAAGCTAAAggccaggcacagtggctcaggcctgtaatcccagcactttaggaagtcgaggtgggtggatcatttgaagtc---agttcaagaccagcctggccaacatggtgaaaccccaactctactaaaaatacaaaaaatagctgggcgtggtggtggacacctgtagtcctggctactcgggaggctgagacaggagaatcgcttgaacccaggaggcggaggtggcagtgagccgagattgtg i nomLeu3.chr7b C 0 C 0 s calJac3.chr1 198329178 255 + 210400635 AAGAATTAAGCTAAAggctgggtgagatggctcacgcctgtaatcccagcacttcggaaggcctaggcgggtggatcatttgaggtcaggaatttgagaccagcctggccaacatcatgaaaccccgtttctattaaaaatacaaaaaataactgagtgtggtggcaggcacctgtaataccagctacttgggaggctaaggcagaagaatcgcttgaaccagggaggcagatatggcagtgagctgagatctca i calJac3.chr1 C 0 C 0 s canFam3.chr10 40949211 58 - 69331447 aatacttg------------------------------tttaatct-------------------attagatgatttctttaagggcagg--------------------------------------------------------------------------------acctgt----ctgactccata---------------------------------------------------------------- i canFam3.chr10 C 0 C 0 e mm10.chr15 77165996 85 + 104043685 I e rheMac3.chr10 80676737 0 + 95678458 C e papAnu2.chr10 76360278 0 + 90941950 C e macFas5.chr10 81102806 0 - 96509753 C e chlSab2.chr19 18628125 12 + 33263144 I a score=785192.000000 s hg38.chr22_KI270876v1_alt 179781 774 + 263666 ccactgcactccagcctgggcaacaagagtgagactctgtctc------aaaaaaaaaaaaaaaaaaaagaa-------------TTAAGCTAAAACAGTTTATACAGTATA-TGCTCATCAGTATATGAAAAGAGAAGGTCTGCAATAAATTCAAACTACAAATCAGAGGTAACTGAATGAATCACCACATACAGACCATCCCTAATTTG-TTAGTCAGTCAATATTC----ATTCA----ATCATGATATCTTCAACATT------GCATGAAGGCCTACAAACAGCAAAAACTATTCAAGAGCTGAAAATACAGGGGAGAAAAAGTAGAAAATAATACACACCAAAATACCATTCGATAAATGCCACGCTTATTCCAATA--TGGCTTGGGAGA----AAATAAAGCAGCAATTGCTACTATAGCCACCACCACCACCATCTAATTTCTCAGGGTGAAGAAAACCCAGAAATATTTCACAAGCAATTAATGCTTAAAATGTACTTT-AAAAAAAC-TAGC--GGGAGTTTTCTAGATGGATTAGGGTG-GTGGTGGGAAGCTTTGAGGCAGTGGAACAACTTTTCAAGTGCATAAAACAGCATAGCATACATGAAGCCATACC---------TACAGAAA----GGCAGGCAGGTCAGCATACCCAAAAAAAGTCAAAAGCCTATTTAAA-AATATCCA-TGGA--AGAGTTCTATTGATTCTAAGGTACTGAGAAAATTGTAAGGCTTTCTACACCAATGGAAA-T-CTTTAAATTATACCTACCAGAAAATAGCAAATCATAGTTAAGTATGGAAACACTCCTTTGCATGACAC s panTro4.chr22 34558465 781 + 49737984 ccactgcattccagcctgggcaacaagagtgagactctgtctcaaaaaaaaaaaaaaaaaaaaaaaaaagaa-------------TTAAGCTAAAACAGTTTATACAGTATA-TGCTCATCAGTATACGAAAAGAGAAGGTCTGCAATAAATTCAAACTACAAATCAGAGGTAACTGAATGAATCACCACATACAGACCATCCCTAATTTG-TTAGTCAGTCAATATTC----ATTCA----ATCATGATATCCTCAACATT------GCATGAAGGCCTACAAACAGCAAAAACTATTCAAGAGCTGAAAATACAGCGGAGAAAAAGTAGAAAATAATACACACCAAAATACCATTCGATAAATGCCACACTTATTCCAATA--TGGCTTGGGAGA----AAATAAAGTAGCAATTGCTACTATAGCCACCACCACCACCATCTAATTTCTCAGGGTGAAGAAAACCCAGAAATATTTCACAAGCAATTAATGCTTAAAATGTACTTTAAAAAAAAC-TAGT--GGGAGTTTTCTAGATGGATTAGGGTG-GTGGTGGGAAGCTTTGAGGCAGTGGAACAACTTTTCAAGTGCATAAAACAGCATAGCATACATGAAGCCATACC---------TACAGAAA----GGCAGGCAGGTCGGCATACCCAAAAAAAGTCAAAAGCCTATTTAAA-AATATCCA-TGGA--AGAGTTCTATTGATTCTAAGATACTGAGAAAATTGTAAGGCTTTCTACACCAATGGAAA-T-CTTTAAATTATACCTACCAGAAAATAGCAAATCATAGTTAAGTATGGAAACACTCCTTTGCATGACAC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30971823 776 + 46535552 ccactgcactccagcctgggcaacaagagtgagactctgtctc---aaaaaaaaaaaaaaaaaaaaaaagaa-------------TTAAGCTAAAACATTTTCTACGGTATA-TGCTCATCAGTATATGAAAAGAGAAGGTCTGCAATAAATTCAAACTACAAATCAGAGGTAACTGAATCAATCACCACATACAGACCATCCCTAATTTG-TTAGTCAGTCAATATTC----ATTCA----ATCATGATATCCTCAACATT------GCATGAAGGCATACAAACAGCAAAAACTATTCAAGAGCTGAAAATGTAGGGGAGAAAAAGTAGAAAATAATACACACCAAAATACCATTTGATAAATGCCACGCTTATTCCAATA--TGGCTTGGGAGA----AAATAAAGCAGCAATTGCTACTATAGCCACCACCACCACCATCTAATTTCTTAGGGTGAAGAAAACCCAGAAATATTTCACAAGCAATTAATGCTTAAAACGTACTTT--AAAAAAC-TAGC--GGGAGTTTTCTAGATGGATTAGGGTG-GTGGTGGGAAGCTTTGAGGCAGTGGAACAACTTTTCAAGTGCATAAAACAGCATAGCATACATGAAGCCATACC---------TACAGAAA----GGCAGGCAGGTCGGCATATTCAAAAAGAGTCAAAAGCCTATTTAAA-AATATCCA-TGGA--AGAGTTCTATTGATTCTAAGGTACTAAGAAAATTGTAAGACTTTCTACACCAATGGAAA-T-CTTTAAATTATACCTACCAGAAAATAGCAAATCCTAGTTAAGTATGGAAACACTCCTTTGCATGACAC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100529436 769 - 115148730 ccactgcactccagcctgggcaacaagagtgaga--ctgtctc-------aaaaaaaaaaaaaaaaaaagaa-------------TTAAGCTAAAACATTTTATACAGTATA-TGCTCATCAGTATATGAAAAGAGAAGGTCTGCAATAAATTCAAACTACAAATCAGAGGTAACCGAATGAATCACCACATACAGACCATCCCTAATTTG-TTAGTCAGTCAATATTC----ATTCA----ATCATGATATCCTCAACATT------GCATGAAGGCCCACAAACAGCAAAAACTATTCAAGAGCTGAAAATATAGGGGAGAAAAAGTAGAAAATAATACACACCAAAATACCATTTGATAAATGGCACGCTTATTCCAATA--TGGCTTGGGAGA----AAATAAAGCAGCAATTGCTACTATAGCCACCACCACCACCATCCAATTTCTCAGGGTGAAGAAAACCCAGAAATATTTCACAAGCAATTAATGCTTAAAGTGTACTTT--AAAAAAC-TAGC--GGGAGTTTTCTAGATGGATAAGGGTG-GTGGTGGGAAGCTTTGAGGCAGTGGAACAACTTTTCAAGTGCATAAAACAGCATGGCATACATGAAGCCATACC---------TACAGAAA----AGGAGGCAGGTCGGCATATCCAAAAA-AGTCAAAAGCCTATTTAAA-AATATCCA-TGAA--AGAGTTCTATTGATTCTAAGGTACTAAGAAAATTGTAAGACTTTCTACACCAATGGAAA-T-CTTTAAATTATACCTACCAGAAAATAGCAAATCATAGTTAAGTATGGAAACACTCCTTTGCATGACAC i nomLeu3.chr7b C 0 C 0 s calJac3.chr1 198329433 770 + 210400635 ccactgtactccagcctgggtaa-aatagcaagattgtgtctc------------agaaaaaaaaaaaaaaaTTTTTTTTTTTTTTTAAGCTAAAACGTATTACACAGTATAGGGCTCATCAGTATATGAAAAGAGAAGGTCTGCAATAACTTCAAACTACAAATCAGAGGTAACTGAATGAATCACCAAATACAGACCATCCCTAAATTA---AGTCAGTTAATGTTC----ATTCA----ATCATGGTATCTTCAACACT------GCACGAAGGTCTACAAACAGCAAAAGCTATTTAAAAGCTGAAAATATACGGCAGAAAAAGTAGAAAATAATAAACACAAAAATGGCATTTGATAAATGCCATGCTTACTCCAATA--TGGCTTGGGAGA----AAATAAAGCAGCAACTGCTACTATAGCCGCCACCACCACCACC---------ATGTAAAAGACAACCCAGAAATATTTCACAAGCAATTAATGCTTAAAATGTACTTT--AAAAAAC-TAGT--AAGCATTTTCCAGATGGATTAGGGAG-ATGGTGGGGAGTCTTGAGGCAGGGGAACAACTTTTCAAGTGCATAAAACAGCATGGCATACATGAAGCCATACT---------TCCAGAAA----GGCAAGCAGGTCAGTATATCCAAAAAAAGTCAAAAGCCTATTTAAA-AATATCCA-TGTAAGAGAGTTCTGTTGATTCTAAGGTAGTATGAAAATTGTAAGATTTTCTACACCAATAGAAA-T-A-TTACATTATACCTACCAGAAAACAGCAAATCCCAGTTAAGTACAGAAACACTCCTTTGCATGACAC i calJac3.chr1 C 0 C 0 s mm10.chr15 77166081 674 + 104043685 ccagccccctccagccaagacaa----actgcaa-tccctttc-------------------aaatcaagag-------------accagataaacccttctt----------tgctcacttgc----------------tctgccaggcattttgatcacaatgagaagaaaagtGTTAGACCTACTACAGCTCACCCACCCTTATTTTCCTCATTCAGTCAATATCC----ATTCACAGCAACACAGCATC--CAACATGGTGTAAGTATGAAGGCTCCCA-----------------AAGAGCTGACAATGCAGGGGAGAGAAAGTAAGGGATGCT--------GGATCACATCTGATAAATGCCACATCTAGTTGAATATCTAGCTGGGATAAAGTCAAATACAGCAGCAAC--CTACTGC--TCTCTACTGCCACCCCCTCATTTTCTGGTGTGAGGAAGA-CTAGGAATAATCCATAGACAATGATTAACTAAA------TTC--AGAGGGCTTAGC--A--AGTTTGGCAGATAAAACAGGAAG-AGTAAGGGA----TTGAG--AGTGGAGCAGCATTCTAAGTGAATAA-----------ACACAGTGAGCAAAGCC---------CACAGAAG----GGAAGATAAA-CAGCAC--------AGAGCCAAAAGCTTGCACGACTACTATCTGCCAGA--AGAGCTCTGTTGGCTCTAGCAT------GAGATGGTTGGGCTTTCTGCACCAAAAGAAAGG-CTTCAAATCATGCTTACCAGAA-----TAGATCACAATGAAGGGTAGAAACACACCTTCACATGACAA i mm10.chr15 I 85 C 0 s canFam3.chr10 40949269 702 - 69331447 -----------------------------------tttctctc-----------------------AAAGAA-------------TTAAGCCAATACCTTTCACACAGCCCA-TGCCCATCA-CATGTGAGAAGGGAAGGTTCAAAATCACCTGAAACTACGAATCAGGGTGAAATGAATTAAAAACCAGGCACAGATCACCTCGCATTTGTTCCTTCAGTCAACACTCATTTATTCA----ACCAAGATATCCTCAATGTT------GTGTGAAGCCCTAGGAATAGA-----------AAGAGCTGATG--GCAGGGGAAAGAAAGCAGAAAACAA---ACACCAAAATACTATTTGACAAATGCCGTA--TGTGTAGGTG--TGACCTGGGGAA----AAAAA-----------GCCACGGCTGCCACCATTGCCACCATCGAACTTCCCAGGGTGATGGAAG-CCAGGAATAGTTCATGAGCTGTTAATACTTGAAA------TT--AATTAAT-CCGTTAAAGAGTTTTCCAGGGGACCTGGAGAGTGTGGTGGGA-GCTTGGAGGCAGTGTAACAGCATT-CAAATGCATATAACAGTATGGCATGGGCAAAGTCATACCGAGGGTGCGTACAGAAATGTTGGCAAGTGAATGAATATATGCACACA-AGTCAAGAGCCTATTCAAA-AATATTCA-TATA--A-AATTCTGTTGGTTCTAAGGTACTGTGAGGACTGTTGAATTTTCTACACCAATGAAAA-TACTTGAAATTATACCTACCAGAGAATAGCAAATCACGGTTAAGTACAGAAGAACTCCTTTGTATGACAC i canFam3.chr10 C 0 C 0 e rheMac3.chr10 80676737 0 + 95678458 C e papAnu2.chr10 76360278 0 + 90941950 C e macFas5.chr10 81102806 0 - 96509753 C e chlSab2.chr19 18628125 12 + 33263144 I a score=438564.000000 s hg38.chr22_KI270876v1_alt 180555 129 + 263666 ATGGTACAGAAAGGAAGTATGGGTAATAACAGAGTAAACCATGGAATGGCTGATATGCAT--TTCTGT-TTTGGAATGAGAGACATGGCATACAAACTGTGAGGCAAGGAATTAGCAGTTTTGTTAAAAGTG s panTro4.chr22 34559246 109 + 49737984 ATGGTACAGAAAGGAAGTATGGGTAATA--------------------GCTGATATGCAT--TTCTGT-TTTGGAATGAGAGACATGCCATACAAACTGTGAGGCAAGGAATTAGCAGTTTTGTTAAAAGTG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30972599 129 + 46535552 ATGGTACAGAAAGGAAGTATGGGTAATAACAGAGTAAACCATGGAATGGCTGAAATGCAT--TTCTGT-TTTGGAATGAGGGACATGGCATACAAACTGTGAGGCAAGGAATTAGCAGTTTTGTTAAAAGTG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100530205 128 - 115148730 ATGGTACAGAAAGGAAGTATGCGTAATAACAGAGTAAACCATGGAATGGCTGAAATGCAT--TTCTAT-TTT-GAATGAGAGACATGGCATACAAACTGTGAGGCAAGGAATAAGCAGTTTTGTTAGAAGTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80676737 129 + 95678458 atggtacaGAAAGGAAGTATGGGTAATAACAGAGTAAACCATAGAATGGCTGAAATGCAT--TTCTAT-TTTGGAATGAGAGATATGGCACACAAACTGTGAGGCAAGGAATTAGCAGTTTTGTTAAAAGTG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81102806 129 - 96509753 ATGGTACAGAAAGGAAGTATGGGTAATAACAGAGTAAACCATAGAATGGCTGAAATGCAT--TTCTAT-TTTGGAATGAGAGATATGGCACACAAACTGTGAGGCAAGGAATTAGCAGTTTTGTTAAAAGTG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76360278 129 + 90941950 ATGGTACAGAAAGGAAGTACGGGTAATAACAGAGTAAACCATAGAATGGCTGAAATGCAT--TTCTAT-TTTGGAATGAGAGATATGGCACACAAACTGTGAGGCAAGGGATTAGCAGTTTTGTTACAAGTG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18628137 129 + 33263144 ATGGTACAGAAAGGAAGTATGGGTAATAACAGAGTAAACCATAGAATGGCTGAAATGCAT--TTCTAT-TTTGGAATAAGAGATATGGCACACAAACTGTGAGGCAAGGAATTAGCAGTTTTGTTAAAAGTG i chlSab2.chr19 I 12 C 0 s calJac3.chr1 198330203 127 + 210400635 ATAGTACAGAAAGGAAGTATAGGTAATAACAGAGTAAACTATGGTATTGCTGAAATGCATGACTCTAT-TTTGGAATGAGAGGCATGGCATACAAACTG-GAGGCAAGAAAT---CAGTTTCGTTAAAAGTG i calJac3.chr1 C 0 I 807 s mm10.chr15 77166755 122 + 104043685 ATGGGAT-TAAAAAAAATGGGGGTAGTAACA----AAACCTGAGTATGGAACACA-GCAT--TT-TGT-TCAGGAATGAAAGGCATGGCCAGTCAACTGTAAGCCAAGTTGACAGTGCTTTTCTTGGTGTTG i mm10.chr15 C 0 C 0 s canFam3.chr10 40949971 129 - 69331447 ATGGTACA-AAAGGAAGTATGGGTAGTAACAGGACAGGCCATGCTATGGCTGAAATGCAT--TCTTCTATTTGGAGAGAGACACAAGGCATGCAAATGGTGAGGCCAAGGATTAGCATTTTTGTTAGAAGTG i canFam3.chr10 C 0 C 0 a score=37327.000000 s hg38.chr22_KI270876v1_alt 180684 13 + 263666 TCATTCATAAATC s panTro4.chr22 34559355 13 + 49737984 TCATTCATAAATC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30972728 13 + 46535552 TCATTCATAAATC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100530333 13 - 115148730 TCATTCATAAATT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80676866 13 + 95678458 TCTTCCACAAATC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81102935 13 - 96509753 TCTTCCACAAATC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76360407 13 + 90941950 TCTTCCACAAATC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18628266 13 + 33263144 TTTTCCATAAATC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198331137 13 + 210400635 tcttttataactc i calJac3.chr1 I 807 C 0 s mm10.chr15 77166877 12 + 104043685 -TCTTTTTAAATT i mm10.chr15 C 0 C 0 s canFam3.chr10 40950100 13 - 69331447 TCTTTCATTACTC i canFam3.chr10 C 0 I 59 a score=11592.000000 s hg38.chr22_KI270876v1_alt 180697 3 + 263666 AGT s panTro4.chr22 34559368 3 + 49737984 AGT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30972741 3 + 46535552 AGT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100530346 3 - 115148730 AGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80676879 3 + 95678458 AGT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81102948 3 - 96509753 AGT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76360420 3 + 90941950 AGT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18628279 3 + 33263144 AGT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198331150 3 + 210400635 agt i calJac3.chr1 C 0 C 0 s mm10.chr15 77166889 3 + 104043685 GGT i mm10.chr15 C 0 I 2982 e canFam3.chr10 40950113 59 - 69331447 I a score=454591.000000 s hg38.chr22_KI270876v1_alt 180700 163 + 263666 AAATGGATAGGACAATAGTTATTCAC--------tttttgtttttaagttagaggcagggttttcaccatgttggccaggctggtctc-acactcctgacctcaagtgatctacccacctcagcctcccaaagtgctggcattacaggcatgagccactgtgcctagccATT s panTro4.chr22 34559371 163 + 49737984 AAATGGATAGGACAATAGTTATTCAC--------tttttgtttttaagttagaggcagggttttcaccatgttggccaggctggtctc-acactcctgacctcaagtgatctacccacctcagcctcccaaagtgctggcattacaggcatgagccactgtgcctagccATT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30972744 162 + 46535552 AAATCGATAGGACAATAGTTATTCAC--------TTCTTTtttttaa-ttagaggcagggttttcaccatgttggccaggctggtctc-acactcctgacctcaagtgatctacccacctcagcctcccaaagtgctgggattacaggcatgagccactgcgcccagccATT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100530349 166 - 115148730 AAATGGATAGGACAATAGTTATTCAC-----Ttttttttttttttaaattagaggcagggttttcaccatgttggccaggctggtctc-acattcccaacctcaagtgatttacccatctcagcctcccaaagtgctgggattacaggcatgagccactgtgcccagccATT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80676882 170 + 95678458 AAATGGATAGGACAACAGTTATTTAC-TTTTTtttttttttttttaa-ttagaggcagggttttcaccatgttggccgggctggtctcaaaactcctgacctcaagtgatctacccacctcagcctcccaaactgctgggattacaggcatgagccactgcacccagccATG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81102951 166 - 96509753 AAATGGATAGGACAACAGTTATTTAC-----Ttttttttttttttaa-ttagaggcagggttttcaccatgttggccgggctggtctcaaaactcctgacctcaagtgatctacccacctcagcctcccaaactgctgggattacaggcatgagccactgcacccagccATG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76360423 171 + 90941950 AAATGGATAGGACAAtagttatttactttttttttttttttttttaa-ttagaggcagggttttcaccatgttggccgggctggtctcaaaactcctgacctcaagtgatctacccacctcagcctcccaaactgctgggattacaggcatgagccactgcacccagccatg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18628282 159 + 33263144 AAATGGATAGGACAATAGTTATTTAC------------TTtttttaa-ttagaggcaaggttttcaccatgttggccgggctggtctcaaaactcctgacctcaagtcatctatccacctcagcctcccaaactgctgggattacaggcatgagccactgcacccagccATG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198331153 164 + 210400635 aaat-gataggacaataattattcac-----ttttttttttttttaaagtagagacaggg-tctcaccatgttggccaagctggtctt-aaattcctaacctcaagtgatctgcccacctcagcctcccaaagtactgggataacagacacaagccactgtgcccagccATT i calJac3.chr1 C 0 C 0 e mm10.chr15 77166892 2982 + 104043685 I e canFam3.chr10 40950113 59 - 69331447 I a score=2742311.000000 s hg38.chr22_KI270876v1_alt 180863 784 + 263666 AG-TTATTCACTTTAAATTTAC-AAGACAATATATAAAGGTTAAGGGGCAAAATGTAAAACTTTCAGAGCAGGAAATAATTTTAAATATTCTAATACTGTTAGGGAAACATACCTAAAAATAATTTCACATACATTATCTTATACAACAAAACTTTTTTCTCTCCATAATAACTTTTATCTCAACTAACTCATAATACCTTTTTGGTGAACTACAAaaaattggtcataatatttcacagctcctccatcaagaagtggaatttgtttcttccaccccttgaatttggtcttag----ctttgtgactcacattggtcttggggatattagcaaatatcacacaagcagaggcttgacaggtgcctgttcactgaggcttgccctctcttgctactctctggaaccccgacactactgtgtgaagaagtgtgaaggac--gagagcaagtggaatacagatgaactgctccagctgagccccca-gatcaactaacctgccaac----tgccagacatgagagtgaggttatcctagaccactgaggctcagcaaatgcggccaagactaaaacaatcacccaaactcctgacccgcagaactctgagcaaataaatgattaacac--tttgttaagctattaagtt----gtgggaaagtttgttacacagcaaaacctaactgacacaATTTCATTGCATAACATGAAGA-TGTAAACCtcaatactgacaccaacaccacactg--------tctgcaggctttaaatcaggctgtgttagtcctgcaactttgttttccttcttcaaa s panTro4.chr22 34559534 784 + 49737984 AG-TTATTCACTTTAAATTTAC-AAGACAATATATAAAGGTTAAGGGGCAAAATATAAAACTTTTAGAGCAGGAAATAATTTTAAATATTCTAATACTGTTAGGGAAACATACCTAAAAATAATTTCACATACATTATCTTATACAACAAAACTTTTTTCTCTCCATAATAACTTTTATCTCAACTAACTCATAATACCTTTTTGGTGAACTACAAaaaattggtcataatatttcacagctcctccatcaagaagtggaatttgtttcttccaccccttgaatttggtcttag----ctttgtgactcacattggtcttggggatattagcaaatatcacacgagcagaggcttgacaggtgcctgttcactgaggcttgccctctcctgctactctctggaaccccgacactactgtgtgaagaagtgtgaaggac--gagagcaagtggaatacagatgaactgctccagctgagccccca-gatcaactaacctgccaac----tgccagacatgagagtgaggttatcctagaccactgaggctcagcaaatgcggccaagactaaaacaatcacccaaactcctgacccgcagaactctgagcaaataaatgattaacac--tttgttaagctattaagtt----gtgggaaagtttgttacacagcaaaacctaactgacacaATTTCATTGCATAACATGAAGA-TGTAAACCtcaatactgacaccaacaccacactg--------tctgcaggctttaaatcaggctgtgttagtcctgcaactttgttttccttcttcaaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30972906 786 + 46535552 AGTTTATTCACTTTAAATTCACAAAGACAATACATAAAGGTTAAGGGGCAAAATGTAAAACTTTTAGAGCAGGAAATAATTTTAAATATTCTAATACTGTTAGGGAAACATACCTAAAAATAATTTCACATACATTATCTTAAACAACAAAACTTTTTTCTCTCCATAAAAACTTTTATCTCAACTAATTCATAATATCTTTTTGGTGAACTACAAaaaattggtcataatatttcacagctcctccatcaagaagtggaatttgtttcttccaccccttgaatttggtcttag----ctttgtgactcacattggtctgggggatattagcaaatatcacacgagcagaggcttgacaggtgcctgttcactgaggcttgccctctcttgctactctctggaaccccgacactactgtgtgaagaagtgtgaaggac--gagagcaagtggaatacagatgaactgctccagctgagccccca-gatcaactaacctgccaac----tgccagacatgagagtgaggttatcctagaccactgaggctcagcaaatgcggccaagactaaaacaatcacccaaactcctgacccgcagaactgtgagcaaataaatgattaacac--tttgttaagctattaagtt----ttgggaaagtttgttacacagcaaaacctaattgacacaATTTCATTGCATAACATGAAGA-TGTAAACCtcaatactgacaccaacaccacactg--------tctgcaggctttaaatcaggctgtgttagtcctgcaactttgttttccttcttcaaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100530515 787 - 115148730 AG-TTATTCACTTTAAATTCACAAAGACAATATATAAAGGTTAAGGGGCAAAATGTAAAACTTTTAGAGCAGGAAATAATTTTAAATATTCTAATACTGTTAGGGAAACATGCCTAAAAATAATTTCACATACATTATCTTATACAACAAAACTTTTTTCTCTCCATAAAAATTTTTATCTCAACTAACTCATAATACTTTTTTGGTGAACCACAAaaaattggtcataatatttcacagctcctccatcaagaagtggaatttgtttcttccaccccttgaatttggtcttag----ctttgtgactcacattggtcttggggatattagcaaacatcacatgagcagaggcttgacaggtgcctgttcactgaggcttgccctctcttgctactctctggaaccccaacactactgtgtgaagaagtgtgaaggacaagagagcaagtggaatacagatgaactgctccagctgagccccca-gatcaactaacctgccaac----tgccagacatgagagtgaggttatcctagaccactgaggctcagcaaatgcggccaagactaaaacaatcacccaaattcctaacccgcagaactgtgagcaaataaatgattaacac--tttgttaagctattaagtt----ttgggaaagtttgttacacagcaaaacctaactgacacaATTTCATTGCATAATATGAAGA-TGTAAACCtcaatactgacaccaacaccacactg--------tctgcaggctttaaatcaggctgtgttagtcctgcaactttgttttccttcttcaaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80677052 790 + 95678458 AG-TTACTCACTTTAAATTCACAAAGACAATATATAAAGGTTAAGGGGCAAGATGTAAAACTTTTAGAGCAGGAAATAATTTTAAATATTCTAATACTATTAGGGAAACATGCCTAAAAATAATTTCACATACATTATCTTATATAACAAAACTTTTTTCTCTCCATAAAGACTTTTATCTCAACTAACTCATAATATCTTTCTGGTGAACTACAAaaaattggtcataatatttcacagctcctccatcaagaagtggaatttgtttcttccaccccttgaatttggtcttag----ccttgtgacttacattggtcctggggatattaccaaatatcacacaagcagaggcttgacaggtgcctgttcactaaggcttgccctctcttgctgctctccggaaccccaacactagtgtgtgcagaagtgtgaaggatgagagagcaagtggaacacagatgaactgctccagctgagccccca-gatcaactaacctgccaac----tgccagacatgagagtgaggttatcctagaccatcaaggctcagccaatgcggccaagactaaaacaatcacccaaactcctgacccacagaattgtgagcaaataaatgtttaacac--tttgttaaactattaagtt----ttgggaaagtttgttacacagcaaaacctaactgacac-aTTTCATTGCATAACATGAAGA-CGTAAACCtcaatactgacaccaacaccacacggtctt----tctgcaggctttaaatcaggctgtgttagtcctgcaactttgttttccttcttcaaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81103117 790 - 96509753 AG-TTACTCACTTTAAATTCACAAAGACAATATATAAAGGTTAAGGGGCAAGATGTAAAACTTTTAGAGCAGGAAATAATTTTAAATATTCTAATACTATTAGGGAAACATGCCTAAAAATAATTTCACATACATTATCTTATATAACAAAACTTTTTTCTCTCCATAAAGACTTTTATCTCAACTAACTCATAATATCTTTCTGGTGAACTACAAAAAATTGGTCATAATatttcacagctcctccatcaagaagtggaatttgtttcttccaccccttgaatttggtcttag----ccttgtgacttacattggtcctggggatattaccaaatatcacacaagcagaggcttgacaggtgcctgttcactaaggcttgccctctcttgctgctctccggaaccccaacactagtgtgtgcagaagtgtgaaggatgagagagcaagtggaacacagatgaactgctccagctgagccccca-gatcaactaacctgccaac----tgccagacatgagagtgaggttatcctagaccatcaaggctcagccaatgcggccaagactaaaacaatcacccaaactcctgacccacagaattgtgagcaaataaatgtttaacac--tttgttaaactattaagtt----ttgggaaagtttgttacacagcaaaacctaactgacac-aTTTCATTGCATAACATGAAGA-CGTAAACCtcaatactgacaccaacaccacacggtctt----tctgcaggctttaaatcaggctgtgttagtcctgcaactttgttttccttcttcaaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76360594 790 + 90941950 ag-tTACTCACTTTAAATTCACAAAGACAATATATAAAGGTTAAGGGGCAAGATGTAAAACTTTTAGagcaggaaataattttaaatattctaatacTGTTAGGGAAACAtgcctaaaaataatttcacatacattatcttatATAACAAAACTTTTTTCTCTCCATAAAGACTTTTATCTCAACTAACTCATAATATCTTTCTGGTGAACTACAAAAAATTGGTCATAATATTTCACAGCTCCTCCATCAAGAAGTGGAATTTGTTTCTTCCACCCCTTGAATTTGGTCTTAG----CCTTGTGACTTACATTGGTCCTGGGGATATTACCAAATATCACACAAGCAGAGGCTTGACAGGTGCCTGTTCACTAAGGCTTGCCCTCTCTTGCTACTCTCCAGAACCCCAACACTAGTGTGTGCAGAAGTGTGAAGGATGAGAGAGCAAGTGGAACACAGATGAACTGCTCCAGCTGAGCCCCCA-GATCAACTAACCTGCCAAC----TGCCAGACATGAGAGTGAGGTTATCCTAGACCATCAAGGCTCAGCCAATGCGGCCAAGACTAAAACAATCACCcaaactcctgacccacagaattgtgagcaaataaatgtttaacac--TTTGTTAAACTATTAAGTT----TTGGGaaagtttgttacacagcaaaaccTAAGTGACAC-ATTTCATTGCATAACATGAAGA-CGTAAACCTCAATACTGACACCAACACCACACGGTCTT----TCTGCAGGCTTTAAATCAGGCTGTGTTAGTCCTgcaactttgttttccttcttcaaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18628441 789 + 33263144 AG-TTACTCACTTTAAATTCACAAAGACAATATATAAAGGTTAAGGGGCGAGATATAAAACTTTTAGAGCAGGAAATAATTTTAAATATTCTAATACTGCTAGGGAAACATGACTAAAAATAATTTCACATACATTATCTTATACAACAAAACTTTTTTCTCTCCATAAAGACTTTTATCTCAACTAACTCATAATATCTTTCTGGTGAACTACAAAAAATTGGTCATAATatttcacagctcctccatcaagaagtggaatttgtttcttccaccccttgaatttggtcttag----ccttgtgacttacattggt-ctggggatattagcaaatatcacacaagcagaggcttgacaggtgcctgttcactaaggcttgccctctcttgctactctccggaaccccaacactagtgtgtgaagaagtgtgaaggatgacagagcaagtggaacacagatgaactgctccagctgagccccca-gatcaactaacctgccaac----tgccagacatgagagtgaggttatcctagaccatcaaggctcagccaatgcggccaagactaaaacaatcacccaaactcctgacccacagaattgtgagcaaataaatgtttaacac--tttgttaaactattaagtt----ttgggaaagtttgttacacagcaaaacataactgacac-aTTTCATTGCATAACATGAAGA-TGTAAACCtcaatactgacaccaacaccacacagtctt----tctgtaggctttaaatcaggctgtgttagtcctgcaactttgttttccttcttcaaa i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198331317 784 + 210400635 AG-TTATTCTCTTTAAATTCACGAAGACAATATATAAAGGTTAA-GGGCAAGATGTAAAACTTTTGGAGCAGGAAATAATTTTAAATATTCTAATAGTATTAGGGAAACATGCCTAAAAATAATTTCACATACCTTATCATATACAACAAAACTTTTTCCTCTCCATAAAAACTTTTACCTCAACTAACTGA-AACATCTTTTTGATGAACTACAAAAAA-TGGTCATCATatttcacaaatcctccatcaagaagcggaatgtttttcttctgccccttgaatt-----ttag----ccttgtgactcacattggtcctggggatattagcaaatatgacacaagcagaggcttgacaggtgcctgttcactggggcttgtcctctcttgctactctctggaaccctgacactactgtgtgaagaagtgtgaaggacgagacagcaagtggactacagatgaattgctccagctgaggcccca-gatcaactaacctgccaac----tgccagacatgagagtgaggtcat-atagaccattcaggctcagccaatgtggcccagactaaaccaatcacccaaactcctgacccgcagaactgtgagcaaataaatgattaatactttttgtaaagctattaagtt----ttgggaaagcttgttacacagcaaaacctaactgacacaATTTCACTGCGTAACATGAAGA-TGTAAACCtcaatactgacaccaacgccacactgtctt----tctgcaggcttcaaatcaggctatgttagtccttcgactttgttttccgtcttcaaa i calJac3.chr1 C 0 C 0 s canFam3.chr10 40950172 778 - 69331447 AG-ACATTCACTGTAAATCCAGAACGACAGTACATAAAGGGTAAGGGGAAAGATAT----CTCTTAAAGCAGAAAATAACTATAAATATTAAAATACTATTTGGAAAATACATCTACAAATGATTCTACATACATTATCTTATATAATAGAGCCTTTTAGCCTCCACAGAAACTTTTATCTTAACTCATTCATAATGCCTCTGTGATATATTACAAAAA--TCATCGCACTATTTTAGAGCCCCTCCAGTAAGAGGTGGAACT--TTTCCTCCACCCCTCGAAACCGCTCTTAGCCTTccttatgaccagcattagccactgggccattagcaaatgtgatacaatcagaggcttgacaggtatttgttcactgggacttgccttcCCTTGCTACTCACCGGAACCCTGAGACTACCGTGTGAGGATGGATGGAAAAC-------AAAGTAGAACAGAGATGAGCTGTTCCAGTTACGCTCTCATGACCAATCAGCTTGCCAACTAGTTGCCAGATGTGAAAGTCAGGTCATCCCAGACCACCCAGGT----------cagtccagacaagaagaaccattcaaatttctgatccacagaattgtgaacacataaatgattaacac--tgt-ttaagccattaaattttggttggagaggtttgttatacagcaaaacttaactaacacaATCTCATTGCGTAACATTAAGAGTATATGCCTCCACACAGAGgccaatatcatactgtcttaatcactg-aagcttgaaatcaagctgtgttagttctccaac----tttttctttttcaaa i canFam3.chr10 I 59 C 0 e mm10.chr15 77166892 2982 + 104043685 I a score=2766837.000000 s hg38.chr22_KI270876v1_alt 181647 763 + 263666 gttgttttggctattctaggtctttggcatttccatatgagttttagaatcagcttgtcaatttctacaaatatctggctaagattctgattgggatatacactgaatctacagatcactttggggagaattaacat-ccgagagaattgagtctttctgactatcaacacagta----tatctctcc-acttCAT-TCCACTATTCAAATAAAGGGTTTT-------TAAAGATTATGACTATCTTTTCTCTAGGCCTGTACTGAAATCGAATGCTATACCTGATG-TTTGTAACACT----TATCATTTCTTCTGAAGTCTGCTAGATCCCATAATACTCACATCCCTATaagactgtatgatactggtgtcaagagag-aaaaatagatcagtgaaacagaatagaaagtccagaaatagatccacaggtgcaaacggaattcagtagagaaagaacagtcttttcaacaaatggtgctgacacaactgg----------------atgaaaagaaa-------cgagatttatactt--ctttccaaatacaaaac--aactcaaaatggaccacatacctaaaaatgtaaaagataaaactgtaaaacttctaggagaaaacttctgtgaccttggattaggcaaagatttctaagctataacat---------------------------------------------------------------------------------taaaaacataatccataaaagaa-----caataaattggacttcatttaaaacttctgcttatcaaaagacactgtgaggagaataaaaagacaagccacaactgagagaaaatgcttgcaaagtatacacctgataaaggactt s panTro4.chr22 34560318 763 + 49737984 gttgttttggctattctaggtctttggcatttccatatgagttttagaatcagcttgtcaatttctacaaatatctggctaggattctgattgggatatacactgaatctatagatcactttggggagaattaacat-ccgagagaattgagtctttctgactatcaacacaata----tatctctcc-acttCAT-TCCACTATTCAAATAAAGGGTTTT-------TAAAGATTATGACTATCTTTTCTCTAGGCCTGTACTGAAATCGAATGCTATACCTGATG-TTTGTAACACT----TATCATTTCTTCTGAAGTCTGCTAGATCCCATAATACTCACATCCCTATaagactgtatgatactggtgtcaagagag-aaaaatagatcagtgaaacagaatagaaagtccagaaatagatccacaggtgcaaacggaattcagtagagaaagaacagtcttttcaacaaatggtgctgacacaactgg----------------atgaaaagaaa-------cgagatttatactt--ctttccaaatacaaaac--aactcaaaatggaccacatacctaaaaatgtaaaagataaaactgtaaaacttctaggagaaaacttctgtgaccttgtattaggcaaagatttctaagctataacat---------------------------------------------------------------------------------taaaaacataacccataaaagaa-----caataaattggacttcatttaaaacttctgcttatcaaaagacactgtgaggagaataaaaagacaagccacaactgagagaaaatgcttgcaaagtatacacctgataaaggactt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30973692 764 + 46535552 gttgttttggctattctaggtctttggcatttccatatgagttttagaatcagcttgtcaatttctacaaatatctggttaggattctgattgggatatacactgaatctatagatcactttggggagaattaacat-ccgagagaattgaatctttctgactatcaacacagta----tatctctcc-acttCAT-TCCACTATTCAAATAAAGGGTTTT-------TAAAGATTATGACTATCTTTTCTCTAGGCCTGTACTGAAATCGAATGCTATACCTGAGG-TTTGTAACACT----TATCATTTCTTCTGAAGTCTGCTAGATCCCATAATACTCACATCCCTATaagactgtatggtactggtgtcaagagag-aaaaatagatcagtgaaacagaatagaaagtccagaaatagatccacaggtgcagacggaattcagtagagaaagaatagtcttttcaacaaatggtgctgacacaactgg----------------atgaaaagaaa-------cgagatttatactt--ctttccaaatacaaaacttaactcaaaatggaccacatgcctaaaaatgtaaaagataaaactgtaaaacttctaggagaaaacttc-gtgagcttggattaggcaaagatttctaagctataacat---------------------------------------------------------------------------------taaaaacataacccataaaagaa-----caataaattggacttcatttaaaacttctgcttatcaaaagacactgtgaggagaataaaaagacaagccacaactgagagaaaatgcttgcaaagtatacatctgataaaggactt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100531302 776 - 115148730 gttgttttggctattctaggactttggcatttccatatgagttttagaatcagcttgtcaatttctacaaatatttggctaggattctgattgggatatacactgaatctatagatcactttggggagaattaacat-acgagagaattaagtctttctgactatcaacacagta----tatctcttc-acttCAT-TCCATTATTCAAAAAAAGGGTTTT-------TAAAGATTATGACTATTTTTTCTCTAGGCCTGTACTGAAATCGAATGCTATACCTGAGG-TGTGTAACACT----TATCATTTCTTCTGAAGTCTGCTAGATCCCATAATACTCACATCCCTATaagactgtagggtactggtgtcaagagag-aaaaatagatcagtgaaacagaatagaaagtccagaaatagatccacaggtgcaaacggaattcagtagagaaagaatagtcttttcaacaaatggtgctgaaacaactggatat---ccacacataatgaaaagaaa-------cgagatttatactt--cttttgaaatacaaaacttaactcaatatggaccacacacctaaaaatgtaaaagataaaactgtaaaatttccaggagaaaacttctgtgacctcggattaggcaaagatttctaagctataacat---------------------------------------------------------------------------------caaaaacataaccaataaaagaa-----caataaattggacttcatttaaaacttctgcttatc--aagacactgtgaggagaataaaaagacaagccacaactgagagaaaatacttgcaaagtatacatctgataaaggactt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80677842 779 + 95678458 gctgttttagctattctaggtctttggcatttccacatgagttttagaatcagcttgtcaatttctataactatctggctaggattctgattgggatatatactgaatctatagatgacttttgggagaattaacat-ccaagagaattgagtctttcagactatcaacacagta----tatctctcc-acttCAT-TACACTATTCAAATAAAAGGTTTT-------TAATGATTATGACTATCTTTTCTCTAGGCCTGTACTGAAATCAAATGCTATACCTGAGG-TTTGTGACACT----TATCATTTCTTCTGAAGTCTGCTAGATCCCATAATACTCACATCCCTATaagactgtatggtactggtgtcaagagag-aaaaatagatcagtgaaacagaatagaaagtccagaaatagatccacaggtgcaaaaggaattcagtagagaaagaatagtcttttcaacaaatggtgctgaaacaactggatat---ccacacataatgaaaagaaa-------agagatttgtactt--ctttccaaatacaaaatttaacgcaaaatggaccacatatctaaaaatgtgaaagataaaactataaaacttctagcaaaaaacttctgtgaccttggattaggcaaagatttctaagctgtaacat---------------------------------------------------------------------------------taaaaacataacccataaaaaaa----acaataaattgaacttcatttaaaacttctgcttatcaaaagacactgtgaggagaataaaaagataagccacaactgagagaaaatatttgcaaagtatatatcttataaaggactt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81103907 779 - 96509753 gctgttttagctattctaggtctttggcatttccacatgagttttagaatcagcttgtcaatttctataactatctggctaggattctgattgggatatatactgaatctatagatgacttttgggagaattaacat-ccaagagaattgagtctttcagactatcaacacagta----tatctctcc-acttCAT-TACACTATTCAAATAAAAGGTTTT-------TAATGATTATGACTATCTTTTCTCTAGGCCTGTACTGAAATCAAATGCTATACCTGAGG-TTTGTGACACT----TATCATTTCTTCTGAAGTCTGCTAGATCCCATAATACTCACATCCCTATaagactgtatggtactggtgtcaagagag-aaaaatagatcagtgaaacagaatagaaagtccagaaatagatccacaggtgcaaaaggaattcagtagagaaagaatagtcttttcaacaaatggtgctgaaacaactggatat---ccacacataatgaaaagaaa-------agagatttgtactt--ctttccaaatacaaaatttaacgcaaaatggaccacatatctaaaaatgtgaaagataaaactataaaacttctagcaaaaaacttctgtgaccttggattaggcaaagatttctaagctataacat---------------------------------------------------------------------------------taaaaacataacccataaaaaaa----acaataaattgaacttcatttaaaacttctgcttatcaaaagacactgtgaggagaataaaaagataagccacaactgagagaaaatatttgcaaagtatatatcttataaaggactt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76361384 779 + 90941950 gctgttttagctattctaggtcTTTGGCATTTCCACACgagttttagaatcagcttgtcaatttctataaCTATCTGGCTAGGATTCTGATTGGGATATATACTGAATCTATAGATGACTTTGGGGAGAATTAACAT-CCAAGAGAATTGAGTCTTTCAGACTATCAACACAGTA----TATCTCTCC-ACTTCAT-TCCACTATTCAAATAAAAGGTTTT-------TAATGATTATGACTATCTTTTCTCTAGGCCTGTACTGAAATCAAATGCTATACCTGAGG-TTTGTGACACT----TATCATTTCTTCTGAAGTCTGCTAGATCCCATAATACTCACATCCCTATAAGACTGTATGGTACTGGTgtcaagagag-aaaaatagatcagtgaaacagaatagaaagtccagaaatagatccacaggTGCAAAAGGAATTCAgtagagaaagaatagtcttttcaacaaatggtgctgaaacaactggatat---ccacacataatgaaaagaaa-------agagatttgtaCCT--CTttccaaatacaaaatttaacgcAAAATGGACCACAtatctaaaaatgtgaaagataaaactataaaacttctagcaAAAAACTtctgtgaccttggattaggcaaagatttctaagctataacat---------------------------------------------------------------------------------taaaaacataacccataaaaaaa----ccaataaattgaacttcatttaaaacttctgcttatCAAAAGACACTGTGAggagaataaaaagataagccacaactgagagaaaatatttgcaaagtatataTCTTATAAAGGACTT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18629230 778 + 33263144 gctgttttagctattctaggtctttggcatttccacacgagttttagaatcagcttgtcaatttctacaactatctggctaggattctgattgggatatacactgaatctatagatgactttggggagaattaacat-ccaagagaattgagtctttcagactatcaacacagta----tatctctcc-acttCAT-TCCACTATTCAAATAAAAGGTTTT-------TAATGATTATGACTATCTTTTCTCTAGGCCTGTACTGAAATCAAACGCTATACCTGAGG-TTTGTGACATT----TATCATTTCTTCTGAAGTCTGCTAGATCCCATAATACTCACATCCCTATaagactgtatggtactggtgtcaagagag-aaaaatagatcagtgaaacagaatagaaagtccagaaatagatccacaggtgcaaaaggaattcagtagagaaagaatagtcttttcaacaaatggtgctgaaacaactggatat---ccacacataatgaaaagaaa-------agagatttgtactt--ctttccaaatacaaaatttaacgcaaaatggaccacatatctaaaaatgtgaaagataaaactataaaacttctagcaaaaaacttctgtgaccttggattaggcaaagatttctaagctataacat---------------------------------------------------------------------------------taaaaacataacccataaaaaaa-----caataaattgaacttcatttaaaacttctgcttatcaaaagacactgtgaggagaataaaaagataagccacaactgagagaaaatatttgcaaagtatatatcttataaaggactt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198332101 774 + 210400635 gttgttttggctattctaggacttcggcatttccatatgagttttagaatcagcttgtcaatttctaaaaatatctggctaggattctgattgagat-tacactgaatctatagatcactctgggaagaattaacat-ccaagagtattgagtctttcagactatgaacacagtgtatctatctctcc-acttCAT-TCCACTATTCAAATAAAGGGTTTT-------TAAAGATTATGACTATCTTTTCTCTAGGGCTGTACTGAAATCGAATGCTATACCTGAGGTTTTGTGA--------TACCATTTCTTCTGAAGTCTACTAGATCCCGTAAT----ACATCCCTGTaagactgtatggtactggtgtcaagacagaaaaaatagatcagtgaaacagaataggaagtccagaaatagatccacaggtgcaacgggaattcagtggagaaataacagtcttttgaacaaatggtgctcaaacaactggatat---cgacaca--atgaaaataaac------cgagatttatactt--ctttccatatataaaatttaactcaaaatggaccacatacctaaaaatgtcaaagataaaactataaaacttccaggagaaaaattctgtgaccttggattacgcgaagatttctaagctataacaa---------------------------------------------------------------------------------taaaaacgcaacccataaaagaa-----caataaactggacttcatttaaaacgttgtcttactaaaagacactatgaggagaataaaaagacaagccatgactgagagaaaatatttgccaagtatacatctgctaaaggactt i calJac3.chr1 C 0 C 0 s mm10.chr15 77169874 762 + 104043685 gttattttaactattccaaatcctttgCAGTTCCATAGTAATTTCACAATAGGTTTGTCAGTTTCTATAAAAATTTGGCTGGTATTCTGATTGAGAT-CACACCCAGTGTACAGACCAGTTTGAACTGGCTTCCTAT-CCTAGAAGG--GAGTCCAT----------GCACAGCT----TATTCTTCC-AGTGCCT-TGAGCTATCCA-------TGTTCTGTCCAGGCAGGGATTGTAATTAACTTTCCTCTAGAC----ACTGGGAT-------------------TCTGC------------TCACCT-TTCTCAAGTCTACTAGGCTACACAGTACTCAGATCCCTACAAGAATGAAT-ATACTGATGTGGGGTGAG--------GGTGAGGAAAAGAGA--------TCCAGAAACACACCCAGAGGAATAAAGACAATT---TGGCGATAGAACAGT-TTCAGAATAACTGG---------AACTGGACATCAGCCACATGTGGTAACAATGAACTGATGTAGACACTTGTAC---------CATGTAGAAAAT-----------TAGATCACAGGCCT-AAAACACAAAACGTGAAAGTACAAA--CTTTAGGAGTACAATTC------CTTGAACTGAGC-AAGATTTCATAGTTATGACATAACctatgagtgttgcttggagggaaggtgcatgcttaccatggtccaggcccttggtctgatccctagcaccAAacagaataaaaac--aagccataaaagaacaaaccaacaaatcagactacactaaaaattttca-tcaccaatggacactgagagg--------aaaacaagtcacaatttaaaggtactatttctaaagtatgtatttgataaagagctT i mm10.chr15 I 2982 I 333 s canFam3.chr10 40950950 777 - 69331447 actgtcttggc--ttctaggtccttggcattcccatataaattttaaaattagcttgttagcttctataaaaaatctacttggattttgattgggat-tacactggatctaaagatcagtttggtgagaattaatatgctgggaatattgagtcttctagctcatgaccagtgta----tatctctcAGAGTACATATCCACTGTTCAAAAATAGG--TTT-------TCAAGTTTATGAATAACTTTTCTCTAGGTATGTACTGAAATCAAATGCTATACCTGAGG-TTTATGATAGTTCACTATCACTT-TTCTGAAGTCTACTAGATCCCATAATACTCACATCCCt-taagacagtgtggtgttggtgtcaaggtag-aaaaatacatcagtggaacaaaatagaaaatgcaaaaatggatccacaggtacaaaggcaattcagtggataaagaacagtgttttcaacaaatggtatcag---aactggatat---ccacacacaatgaaaatgaac------ctagatacataccttatataccatatacaatatctgg-tcaaaatggaccacagact--aaaatgtgaaaggtgaaattataaaactcctaggagaaaacctgtatgactttggatgaggcaaaggtttctaagatatgacgc---------------------------------------------------------------------------------caagggcacagtttgtaaaagaacaaactaataaaatgaacttcattaaaattttctgctctacaaaagatactgtaag---aatataaagacaagctacaactgagagaaaatatttgcaaagcatgcatctgatacaggactt i canFam3.chr10 C 0 C 0 a score=875942.000000 s hg38.chr22_KI270876v1_alt 182410 276 + 263666 gtattcagaatatacaagaactctcaaaattcaaccataagaaacaaaacaaccca--------cgttttttaaaaaatgggcaaaaaaa--atgaacacctgattaaaagaagatggtaa--atgagatagtaaacaagcgcatgaaaagaagctcagtatcattattcactaggaaattagaacctattagtatgatatcactacatacctatttaaaagact-------------tcgacaataccaagctttggcaaggctatggaggaaccgaaagtctcatatgctgctggtgga- s panTro4.chr22 34561081 274 + 49737984 gtattcagaatatacaagaactctcaaaattcaaccataagaaacaaaacaaccca--------cgtttttaaaaaaatgggcaaaaaaa--atgaacacctgattaaaagaagatggtaa--atgagatagtaaacgagcgcatgaaaagaagctcagtatcattattcactaggaaattagaacctattagtatgatatcactacatacctatttaaaagact---------------gacaataccaagctttggcaaggctatggaggaaccgaaagtctcatatgctgctggtggg- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30974456 275 + 46535552 gtattcagaatatacaagaactctcaaaattcaaccataagcaacagaacaaccca--------cgctttttaaaaaatgggcaaaaaaa--ttgaacacttgattaaaagaagatggtaa-taagagatggtaaacaagcgcatgaaaagaagctcagtatcattattcactaggaaattagaacctatcagtatgatatcactacatacctatttaaaagact---------------gacaataccaagctttggcaaagctatggaggaaccgaaagtctcacatactgctggtggg- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100532078 276 - 115148730 gtattcagaatatacaagaactctcaaaattcaaccataagaaataaaacaaccca--------cgtttttttaaaaatgggcaaaaaaa--ttgaacacttgattaaaagaagatggtaaataagagatggtaaacaagggcatgaaatgaagctcagtatcattattcactaggaaattagaacctatcagtatgatatcactacatacctacttaaaagact---------------gacaataccaagctttggcaaggctatggaggaaccgaaagtctcatatactgcgggtggg- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80678621 278 + 95678458 gtattcagagaatataagaactctcaaagttcaaccataagaaacaagacaaccca--------cgttttctaaaaaatgggcaaaaaaaatttgaacacttgattaaaagaagatggtaaataagagatggtaaacaagcgcatgaaaagaagctcagtatcattattcattaggaaattagaacttatcagtatgatatcactacatacctagttaaaagact---------------gacaataccaagctttgacaaggctatggaggaagcgaaagtctcatatactgctcgtggg- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81104686 278 - 96509753 gtattcagagaatataagaactctcaaagttcaaccataagaaacaagacaaccca--------cgttttctaaaaaatgggcaaaaaaaatttgaacacttgattaaaagaagatggtaaataagagatggtaaacaagcgcatgaaaagaagctcagtatcattattcattaggaaattagaacttatcagtatgatatcactacatacctagttaaaagact---------------gacaataccaagctttgacaaggctatggaggaagcgaaagtctcatatactgctcgtggg- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76362163 277 + 90941950 GTATTCAGAGAATATAAGAACTC-CAAAGTTCAACCATAAGAAACAAGACAAccca--------tgttttctaaaaaatgggcaaaaaaaattTGAACACTTGATTAAAAGAAGATGGTAAATAAGAGATGGTAAACAAGCGCATGAAAAGAAGCTCAGTATCATTATTCATTAGGAAATTAGAACTTATCAGTATGATATCACTACATACCTAgttaaaagact---------------gacaataccaagctTTGACAAGGCTATGGAGGAAGCGAAAGTCTCATATACTGCTCGTGGG- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18630008 278 + 33263144 gtattcagagaatataagaactctcaaagttcaaccataagaaacaagacaactca--------cgttttctaaaaaatgggcaaaaaaaatttgaacacttgattaaaagaagatggtaaataagagatggtaaacaagtgcatgaaaagaagctcagtatcattattcattaggaaattagaacttatcagtatgatatcactacatacgtagttaaaagact---------------gacaataccaagctttgacaaggctatggaggaaccaaaagtctcatatactgctcgtggg- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198332875 259 + 210400635 gtattcagaatgtataagaactctcaaagctcaaccataagaaacaaaacaaccca--------cggtttttaaaaaatgggcaaaaaaa-cctgaacacttgattaaaagaagacggtaa--------------acaagcacatggaaagatgctcaatatcattattcactagaaaattagaac----cataatgatatcactacatacctattcaaaagact---------------gacaggaccaagctttggcaaggctatggaggaaccgaaagtctcatatactgctggtggg- i calJac3.chr1 C 0 C 0 s canFam3.chr10 40951727 289 - 69331447 atatccagaatatataaaatctctccaaactcaagcataagaaaacaagtaacccgttttggttttttttttttttaatgagcaaaagat--ttggacacttggcca----aagatgatac---agagatatcaacaaagcaaatgaaaagatgcttgatgccattattcattcagaaattaaaac----tacaacaatgccactacatacctattaggaagactcatatttgaaggatcaacaatattaaatgctggcaaggcaatggaggaacagaaagtgtcaaatactgctggtcaga i canFam3.chr10 C 0 C 0 e mm10.chr15 77170636 333 + 104043685 I a score=2027801.000000 s hg38.chr22_KI270876v1_alt 182686 616 + 263666 atgtaaaatggtataaccaatgtggaaacagt--ttagcaagttcttataaattcaaacacacacctaccatatgatctatctattcta------------actatttacccaagagaaaaaagaacata-------taaagaatatgaatatgaatactcataaaaaatctatttgtc-tggcctaaaactggaaacaatccaaatatccatcaacagataagtaatagtgataaacaaattgtcatatatccacaatt----a-ctactacttagaaataaaaattaatgaaccaccagtatata--cagtaacatggatgaatttcaaaataattatgctgagcgaaagaagccacgcaaaacag-tacttattgt-atgagtccatttttatacaatactagaaattgccaactaatcaatagtgacagaaagcagataagcggttgcttggagatgtgctggggaggtaagagcatattgggagcactacaaaggggcatgagaaaacttacggagatgattcatatgttaattatcttggttgt---ggtgatttcacgggtatatacatatgccaaaacctaacaaat--t---aattttatataggtgcagttcattgtat---atcaattatacctccatcgagttgtt s panTro4.chr22 34561355 613 + 49737984 atgtaaaatggtataaccaatgtggaaacagt--ttagcaagttcttataaattcaaacacacacctaccatatgatctatctattcta------------actatttacccaagagaaaaaagaacata-------taaagaatatgaatatgaatactcataaaaaatctatttgtcatggcctaaaactggaaacaatccaaatatccatcaacagataagtaatagtgat----aaattgtcatatatccacaatt----a-ctactacttagaaataaaaattaatgaaccaccagtatata--cagtaacatggatgaatttcaaaataattacgctgagtgaaagaagccacacaaaacag-tacttattgt-atgagttcatttttataaaatactagaaattgccaactaatcaatagtgacagaaagcagataagcggttgcttggagatgtgctggggaggtaagagcatattgggagcattacaaaggggcatgagaaaacttatggagatgattcatatgttaattatcttggttgt---ggtgatttcacgggtatatacatatgccaaaacctaacaaat--t---aattttatataggtgcagttcattgtat---atcaattatacctccatcgagttgtt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30974731 617 + 46535552 atgtaaaacggtataaccaatgttgaaacagt--ttagcaagttcttataaattcaaacacacatctaccatatgatctatctattcta------------actatttacccaagagaaaaaagaacata-------taaagaatatgaatatgaatactcataaaaaatctatttgttatagcctaaaactggaaacaatccaaatatccatcaacagataagtaatagtgataaacaaattgtcatatatccacaatt----a-ctactacttagaaataaaaatgaatgaaccaccagtatata--cagtaacatggatgaatttcaaaataattatgctgagtgaaagaagccaggcaaaacag-tacttattgt-atgagtcaatttttacaaaatactagaaattgccaactaatcaatagtgacagaaagcagataagcggttgcttggagatgtgctggggaggtaagagcatattgggagcattacaaaggggcatgagaaaacctacggagatgattcatatgttaattatcttggttgt---ggtgatttcacgggtatatacatatgccaaaacctaacaaat--t---aattttatataggtgcagttcattgtat---atcaattatacctccaactagttgtt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100532354 619 - 115148730 atgtaaaatggcataaccaatgtggaaaaagt--ttagcaagttcttataaattcaaacacacacctaccatatgatctatctattct-------------actatttacccaagagaaaaaagaacata-------taaagaatatgagtatgaatactcatagaagatctatttgtcatagcctaaaactggaaacaatccaaatatccatcaacagataagtaatagtgataaacaaattgtggtatatccacaatt----a-ctactacttagaaataaaaatgaacgaaccaccagtatata--cagtaacatggatgaatttcaaaataattatgctgagtgaaagaagccaggcaaaacag-tatttattgt-atgagtccatttttataaaatactagaaattgccaactaatcaataatgacagaaagcagataagcggttgcttggagatgtgctggggaggtaagagcatactgggagcattacaaaggggcatgagaaaacttactgagatgattcatatgttaattatcttggttgt---ggtgatttcacgggcatatacatatgccaaaacctaacaaat--t---aattttaaataggtgcagttcattgtatatcatcaattatacctccatcgagttgtt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80678899 610 + 95678458 atgtaaaatggtataaccaatgtgaaaacagt--ttatcaagttcttataaattcaaacacacacctatcatatgatctatctattctg------------actattcacccaacagaaaaaagaacata-------taaagaatatgaatatgaatactcatagaagatctatttgtcacagcctaaaactggaaacaatccaaatatccatcaacagataagtgacagtgataagcaaattgtggtacatccacaatt----a-atactacttagcaatacaaatgaatgaaccaccagtatata--cagcaacatggatgaatttcaaaataattatgctgagtgaaagaagccaagccaaacag-tacttactgt-atgagtccatttttataaaatactagaaattgccaaccaatcaatggtgacagaaagcagataagtggttgcttggagatgtgctggggaggtgagagcatgttgggaggattacaaaggagcatgagaaaacttatggagatgattc-------aattatcttggttgt---ggtgatttcacgggtatatacatatgccaaaacctaacaaat--t---aattttatataggtgcagtttattttat---atcaatgatacctccatcgagttgtt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81104964 610 - 96509753 atgtaaaatggtataaccaatgtgaaaacagt--ttatcaagttcttataaattcaaacacacacctatcatatgatctatctattctg------------actattcacccaacagaaaaaagaacata-------taaagaatatgaatatgaatactcatagaacatctatttgtcacagcctaaaactggaaacaatccaaatatccatcaacagataagtgacagtgataagcaaattgtggtacatccacaatt----a-atactacttagcaatacaaatgaacgaaccaccagtatata--cagcaacatggatgaatttcaaaataattatgctgagtgaaagaagccaagccaaacag-tacttactgt-atgagtccatttttataaaatactagaaattgccaaccaatcaatggtgacagaaagcagataagtggttgcttggagatgtgctggggaggtgagagcatgttgggaggattacaaaggagcatgagaaaacttatggagatgattc-------aattatcttggttgt---ggtgatttcacgggtatatacatatgccaaaacctaacaaat--t---aattttatataggtgcagtttattttat---atcaatgatacctccatcgagttgtt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76362440 585 + 90941950 ATGTAAAA---------------------AGT--TTATCAAGTTCTTATAAATTCAAACACACACCTATCATATG----ATCTATTCTG------------ACTATTCACCcaacagaaaaaagaacata-------taaagaatatgaatatgaatactCATAGAAGATCTATTTGTCACAgcctaaaactggaaacaatccaaatatgcATCAACAGATAAGTGACAGTGATAagcaaattgtggtacatccacaatt----a-atactacttagcaatacaAATGAACGAACCACCAGTAtata--cagcaacatggatgaatttcaaaataattatgctgagtgaaagaagccaagccAAACAG-TACTtactgt-atgagtccattttTATAAACTACTAGAAATTGCCAACCAATCAatggtgacagaaagcagataagTGGTTGCTTGGAGATGTGCTGGGGAGGTGACAGCATGTTGGGAGGATTACAAAGGGGCATGAGAAAACTTATGGAGATGATTC-------AATTATCTTGGTTGT---GGTGATTTCACGGGTATATACATATGCCAAAACctaacaaat--t---aattttatataggTGCAGTTTATTTTAT---ATCAATGATACCTGCATCGagttgtt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18630286 610 + 33263144 atgtaaaatggtataaccaatgtgaaaacagt--ttatcaagttcttataaattcaaacacacacctaccatatgatctatctattctg------------actattcacccaacagaaaaaagaacata-------taaagaatatgaatatgaatactcatagaagatctatttgtcacagcctaaaactggaaacaatccaaatatccatcaacagataagtgacagtgataaacaaattgtggtacatccacaatt----a-atactacttagcaatacaaatgaacgaaccaccagtatgta--cagcaacatggatgaatttcaaaataattatgctgagtgaaagaagccaagccaaacag-tacttactgt-atgagtccatttttataaaatactagaaattgccaactaatcaatggtgacagaaagcagataagtggttgcttggagatgtactggggaggtgagagcatgttgggaggattacaaaggggcatgagaaaacttatggagatgattc-------aattatcttggttgt---ggtgatttcacgggtatatacatatgccaaaacctaacaaat--t---aattttatataggtgcagtttattttat---atcaatgatacctccatcgagttgtt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198333134 607 + 210400635 at-caaaatggtataaccaatgtggaagcagt--ttagcaagttcttacaaattcaaacacatgcctaccatatgatccatctattct----------------atttatccaacagaaaaaaaaatgt----------aaacacttgtatatgaatacttatgtaagatttatttatcatagcctaaaactggaaacaatccaaatatccatcaacaggtaagtgacagtgacaaacaaactgtggtatatccacaatt----a-ctactacttagcaataaaaatgaatgaaccatcagtatatattcaataacatggataaatctcaaaatacttaggctgagtaaaagaagccaggcaaaacag-tatttattgt-atgagtccatttttataaaatactagaaaatgccaactaatcaatagtgac----agcaggtaagtgattgcttggagatgtgctgaagaggtgagggcatgttgggaggattacaaaggggcatgagaaaacttatggagatgattaatatgttaattatcttggtttg---ggtgatttcatgggtatatatatgtgccaaaatctaacaaac--t---aattttatataggtgcagtttactgtat---atcaattatacctccacccagttgtt i calJac3.chr1 C 0 I 304 s mm10.chr15 77170969 557 + 104043685 ATAAGaaattgtacaactgacctagaatcaatacttagtaacttcttaaaatatc--acatatacctttcatatagcctacccagtctacttgctagtattactatttatccaagagaaatgagaacct--------------------------atattcata-------tatacacctgaacCCTA----GGGTACAACCCACATACCTACCAAGAGACAA-------CACTTACCATACTGC--CACAGTCACAAGTGAGCA-CCATGAGTCATCAGCAAAAATGGATGAGCTTTTAGTGTACC-------------------------ATcatggtaccaggtacaacaagcccagccatagggctttttactgtaatggttacatttttttcaaattcta-aaagtacaaacagatctatagtggtggaaagcaaatcactggttacttgctagtgtgcttggcagggaagcccat----------------caggacatgaagaatcctctgaagacctgtaatctgctagttatctcagttgtaagaatgacttcaggggtatgtacatgt--caaaacttaacaaactgt---gacttcat-tgtatatcacttattgtgt---attaattacactt-caacaaaCTGTC i mm10.chr15 I 333 I 104 s canFam3.chr10 40952016 557 - 69331447 gtatcaaatggtatagtcaatgtggaaacaat--ttagcaatttcttaaaaagctaaacatatacataccatatgatccttgcattccacttcta------agtatttatccaagaggaatgaaaacataaattcactaaaagacttgttcagagaaac----agcagctttatatatcaaagcccaaaa-tggaaaaaacctaactgtccatcag-aaataa------atgatgaacaaattatggtatgtccacaata----gcctattattcagcaataaaaataaatgaaccattggtatatg--caacaacatggatgaacctcaaaatcattatgctgcatcaaacaaaccaggaaaaagag-tatttactgt---gcttccatttttacaaaatactagaaaatgcaaactaatccatgctgatagaaattgtatcagtggttgcctagagatgtg----------gagggagagttggaagaataaca-aggggtatgagggaacttttagaga-------------------------tgt------------------------------caaaacttatcaaat--tataagctttacatatgcgtaatttattgcct---atcaattaaacttcagtagagctgtt i canFam3.chr10 C 0 C 0 a score=40360.000000 s hg38.chr22_KI270876v1_alt 183302 10 + 263666 aaaaaaTTAA s panTro4.chr22 34561968 10 + 49737984 aaaaaaTTAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30975348 10 + 46535552 aaaaaaTTAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100532973 10 - 115148730 aaaaaaTTAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80679509 10 + 95678458 aaaaaaTTAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81105574 10 - 96509753 aaaaaaTTAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76363025 10 + 90941950 aaaaaattaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18630896 10 + 33263144 aaaaaaTTAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198334045 10 + 210400635 aaataattaa i calJac3.chr1 I 304 C 0 s mm10.chr15 77171630 10 + 104043685 tacaaattga i mm10.chr15 I 104 I 116 s canFam3.chr10 40952573 10 - 69331447 aaaaaaaTAA i canFam3.chr10 C 0 C 0 a score=1871167.000000 s hg38.chr22_KI270876v1_alt 183312 576 + 263666 AATAATGAATTCTTGTCCC--ACTTAATGCAATGAATTTTTGAAGGGTTAGTTATTTTCTTTGGAGG--GG-GGGGG--GAATGATAAAAGGAGATGGGGGAAAGGCATCCGTCTTCCCT------AAAACACTACAGAAAAGGTCTTCTGAAAAGGAAGAC--------TGGTAGCAAATTCC------------------------------------------------TTCTGATCAGTCTAGA------------------TTAGCCCCCTGCTAGAGAACCCCT---TTAGCACGTGCATACATCCTCCTCACTTTGCCAGACATA---TCATCGTTtctgtctctcccacttcaggagggcaggtactacatagtcca-ccttcttccttaaagtatccctaatacctagcagagtacctggttgtagtaCACAAGcaacatcacatgtgggtaagagttcaggcctctgtt-aagccaggcta-cttgattcgaatcttagctccataact----------tcttagctgtgtaatttgagaaaagttatttaacacctctctgcctcaagttcttcgtctggaaaaagaagataataatagtacctatctcatggggctgctgtgatgactaaatcagttgatatatgaataggcctggcata---t----actgattat s panTro4.chr22 34561978 577 + 49737984 AATAATGAATTCTTGTCCC--ACTTACTGCAATGAATTTTTGAAGGGTTAGTTATTTTCTTTGGAGG--AGCGGGGG--GAATGATAAAAGGAGATGGGGGAAAGGCATCAGTCTTCCCT------AAAACACTACAGAAAAGGTCTTCTGAAAAGGAAGAC--------TGGTAGCAAATTCC------------------------------------------------TTCTGATCAGTCTAGA------------------TTAACCCCCTGCTAGAGAACCCCT---TTAGCACGTGCATACATCCTCCTCACTTTGCCAGACATA---TCATCGTTtctctctctcccacttcaggagggcaggtactacatagtcca-ccttcttccttaaagtatccctaatacctagcagagtacctggttgtagtaCACAAGcaacatcacatgtgggtaagagttcagggctctgtt-aagccaggcta-cttgattcagatcttagctccataact----------tcttagctgtgtaatttgagaaaagttatttaacacctctctgcctcaagttcttcgtctggaaaaagaagataataatagtacctatctcatggggctgctgtgatgactaaatcagttgatatatgactaggccaggcata---t----agtgattat i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30975358 573 + 46535552 AATAATGAATTCTTGT-CC--ACTTAATGCAATGAATTTTTGAAGGGTTAGTTATTTTCTTTGGAGG--AG---GGG--GAATGATAAAGGGAGATGGGGGAAAGGCATCAGTCTTCCCT------AAAACACTACAGAAAAGTTCTTCTGAAAAGGACAAC--------TGGTAGCAAATTCC------------------------------------------------TTCTGATCAGTCTAGA------------------TTAGCCCCCTGCTAGAGAACCCCT---TTAGCACATGCATACATCCTCTTCACCTTGCCAGACATA---TCATCGTTtccatctctcccacttcaggagggcaggtactacatagtcca-ccttcttccttaaagtatccctaacacctagcagagtacctggTTGGAGTACACAAGcaacatcacatgtgggtaagagttcagggctctgtt-aagccaggcta-cttgattcaaatcttagctccataaca----------tcttagctgtgtaatttgagaaaggttatttaacacctctctgcctcaagttcttcgtctggaaaaagaagataataatagtacctatctcatggggctgttgtgatgactaaatcagttgatatatgaataggcctggcata---t----agtgattat i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100532983 569 - 115148730 AATAATGAATTCTCGTCCC--ACTTAATGCAATGAATTTTTGAAGAGTTAGTTATTTTCTTTGGAAG--AG---GGG--GAATAATAAAGGGAGATGGTGGAAAGGCATCAGTCTTCCAT------AAAACACTACAGAAAAGGTCTTCTGAAAAGGAAGAC--------TGGTGGCAAATTCC------------------------------------------------TTCTGATCAGTCTAGA------------------TTAGCCCCCTGCTAGAGAACCCCT---TTAGCATGTGCATACATCCTCTTCACTTTGCCAGACATA---TCATCATTTCCGTCTCTCCCACTTCAGAAGGGCAGGTACTACACAGTCCA-CCTTCTTCCTTAAAGTATCCCTAACACCTAGCAGAGTACCTGGTTGGAGTACACAAGcaacatcacatgtgggtaagagttcagggctctgtt-aagccaggcta-cttgattcaaatcttagctccataact----------tcttagctgtgtaatttgagaaaagttatttaacacctctttgcctcaagttcttcatctggaaaaag-----aataatagtacctatctcatggggctgttgtgatgactaaatcagttgatatatgaataggcctggcata---t----agtgattat i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80679519 571 + 95678458 AATAATGAATTATTGTCCC--ACTTAATGCAATGATTTTTTGAAGCGTTAGTTATTTTCTTTGCAGG--AG---GGG--GAATGATAAAGGGAGATGGGGGAAAGGCATCAGTCTTCCCT------AAAACACTACAGAAAAGGTCCTCTGAAAAGGAAGAC--------TGGTAGCAAACTC---------------------------------------------------CTGATCAGTCCAGA------------------TTAGCCCCCTGCTAGATAAACCCT---TTAGCACGTACACACATCCTCTTCACTTTGCCAGACATA---TCATCATTTCCATCTCTCCCATttcaggaaagcaggtactacatagtcca-ccttcttccttaaagtatccctaacacctagcagagtgcctagTTGGGGTACATAAGCAACACCACATgtgggtaagagctcagggctctgtt-aagccaggcta-cttggttcaaatctcagttccataact----------tcttagctgtgtaatttgagaaaagttatttaacacctctctgcctcaagttcttcgtctggaaaaagaagataataatagtacctatctcatggggcagttgtgatgactaaatcagttgatatatgaacaggtctggcata---t----agtgattat i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81105584 571 - 96509753 AATAATGAATTATTGTCCC--ACTTAATGCAATGATTTTTTGAAGCGTTAGTTATTTTCTTTGGAGG--AG---GGG--GAATGATAAAGGGAGATGGGGGAAAGGCGTCAGTCTTCCCT------AAAACACTACAGAAAAGGTCCTCTGAAAAGGAAGAC--------TGGTAGCAAACTC---------------------------------------------------CTGATCAGTCCAGA------------------TTAGCCCCCTGCTAGATAAACCCT---TTAGCACGTACACACATCCTCTTCACTTTGCCAGACATA---TCATCATTTCCATCTCTCCCATttcaggaaagcaggtactacatagtcca-ccttcttccttaaagtatccctaacacctagcagagtgcctagTTGGGGTACATAAGCAACACCACATgtgggtaagagctcagggctctgtt-aagccaggcta-cttggttcaaatctcagttccataact----------tcttagctgtgtaatttgagaaaagttatttaacacctctctgcctcaagttcttcgtctggaaaaagaagataataatagtacctatctcatggggcagttgtgatgactaaatcagttgatatatgaacaggtctggcata---t----agtgattat i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76363035 571 + 90941950 aataatgaattattgtCCC--ACTTAATGCAATGATTTTTTGAAGCGTTAGTTATTTTCTTTGGAGG--AG---GGG--GAATGATAAAGGGAGATGGGGGAAAGGCATCAGTCTTCCCT------AAAACACTACAGAAAAGGTCTTCTGAAAAGGAAGAC--------TGGTAGCAAACTC---------------------------------------------------CTGATCAGTCCAGA------------------TTAGCCCCCTGCTAGATAAACCCT---TTAGCATGTACACACATCCTCTTCACTTTGCCAGACATA---TCATCATTGCCATCTCTCCCATTTCAGGAAAGTAGGTACTACATAGTCCA-CCTTCTTCCTTAAAGTATCCCTAACAGCTAGCAGAGTGCCTAGTTGGGGTACATAAGCAACACCACATGTGGGTAAGAGTTCAGGGCTCTGTT-AAGGCAGGCTA-CTtggttcaaatctcagttccATAACT----------TCTTAGCTGTGTAATTTGAGAAAAGTTTTTTAACACCTCTCTGCCTCAAGTTCTTCGTCtggaaaaagaagataataatagtacctatctcatgGGGCAGTTGTGATGACTAAATCAGTTGATATATGAACAGGTCTGGCATA---T----AGTCATTAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18630906 574 + 33263144 AATAATGAATTATTGTCCC--ACTTAATGCAATGATTTTTTGAAGCGTTAGTTATTTTCTTTggagg--ag---gga--gaatgataaagggagatgggggaaaggCATCAGTCTTCCCT------AAAACACTACAGAAAAGG---TCTGAAAAGGAAGAC--------TGGTAGCAAACTCC------------------------------------------------TTCTGATCAGTCCAGA------------------TTAGCCCCCTGCTAGATAAACCCT---TTAGCACGTACACACATCCTCTTCACTTTGCCAGACATCCCTTCATCATTTCCATCTCTCCCATTTCAGGAAAGCAGGTACTATACAGTCCA-CCTTCTTCCTTAAAGTATCCCTAATACCTAGCAGAGTGCCTAGTTGGGGTACACAAGCAACACCACATgtgggtaagagttcagggctctgtt-aagccaggcta-cttggttcaaatctcagctccataact----------tcttagctgtgtaatttgagaaaagttatttaacacctctctgcctcaagttcttcgtctggaaaaagaagataataatagtacctatctcatggggcagttgtgatgactaaatcagttgatatatgaataggtctggcata---t----agtgattat i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198334055 584 + 210400635 aataataaattattGTCCCTTTTTTAATGCAATGAATTTTTGAAG-GTTAGTTATTTTATTTGGAGG--AG---GGG--GACTGAGAAAAGGAGATGGGGGAAAGGCATCGATCTTCCCT------AAAACACTACAGAAAAG-TCTTTTGAAGAGGAAGAC--------TAATGGCAAATTAC------------------------------------------------TTCTGATCAGTCTAGA------------------TTATCCCCCTGCTAGATACCCGCT---TTAGCCCTTGCACACATCATCTTCGCTTTGTCATACATA------Tcatttctgtctctcccactttaagagggcaggttctacatagtcta-ccttcttccttaaagtatccctaacacctagcagagtgcctggTTGGTGTACATAGGCAacaacacacgttgctaagagttcagggctctttcaaagccaggcta-cttgattcaaatgttaggtccataacttcttataacatcttagctgtgtaatttgagaaaagttatttaacacttctcagcctcaagttcttcgtctggaaaaagaagataataatagtacctatgtcatggggctgttgtgatgactaaatcagttgatata-ggataggcctggcataccgt----ggttgttat i calJac3.chr1 C 0 C 0 s mm10.chr15 77171756 538 + 104043685 AAGACTTAATTCCTACCTT--CCTCAGTGC--TGAGGTCTTAGAAGGTCAGTTATCTGCTTTGAGGGGAAG---GAG--GAGTGGCAAAGGGAGATGGG---AAATCATCAACCTGTCCTCTTGGAAGGAGATTAAGGATATGGT-----------GGAAAT--------TAGGGGGAAATGTC----------------------------------------------AAATGTAAGCAGAGGAGAAATGACAAGGTGCTCTGGCTGTGCCACTGGCAGGCAGACCCTCCCTTTGCACTTGCAAGTGACCTTTTCATTCTGT------TA------------------CTCCAATCTTGCGAAGAGAGGGG-TATATAGTCTATCTTTCTTCCTCGA--TATCCCCCACACTCAGCAGAATTCCTGAATGGTCTAAGCCAG--------AGTGTGTGCTGGAGACTGGGGCTATG---AGGCCAGACTAGATGGAGTCAAATACTGAAG--GGAGGC----------TCTCAGCCTTATGTTTTGGGAGGCACTGT-------CTCTCTGCCTCGAATTCTTTCTCTGGAAGAAGAAGGTAACAACAGGAACTCAC------AGCTGCTGTGCTCTCTAAGTCAG----TGCACAGACAAGTCCACCACA---C----AGTGATGAT i mm10.chr15 I 116 I 98 s canFam3.chr10 40952583 568 - 69331447 ----ATGAATTCCTGCCTC--GTGTGCTGCAATGAGTTTGTGGAGGACTAGTTCTTTTCTTTGGGGA--GA---GGGTAGACTGGTAAAGGGAGTTGGG-GAAAGTCACTAGCGTGCCCT------ACAACATTACAGAGGAAGTCTTATTAAAAGGAAGATTATGGGTATGGTGGCAAATTAGGTATGAGATTTAAGCAGAAGTATAAAAGCATGCTTTTTTAAAAATCACTTCTGATTAGTCTAGT------------------TTAGATCTCTGCTGCATA-CCACC---TTAGCACTAGCACATGTCCTTTTCAACTTGTCATGAATG------TAATTTCTGCCTCTTCCAGCCTAGGGCggtagggactatataatcta-tcttattcctcgaagcatccctaacacttagcagaatgcctgATTGGTGTACAGAAGCCACA------------------TTAGTGTGcagtt-aag--------------------------------------------------agctgtgtaactttgagaaagttatttcacatctctctgcctcaggccttgtatctggaaaaa--agacgataggaatgcctacctcattgggttgctaggatgattacatcagccggcatatgaatacgcctggTATT---CGACGAGTGAGTAT i canFam3.chr10 C 0 C 0 a score=812654.000000 s hg38.chr22_KI270876v1_alt 183888 241 + 263666 taaattatagttgatgttatCGGCGTCATTGCTGTCGTCGTCATCATCATTATCTCTGATAATT---GAAGGACATTTAAAAGAGATTGAGAATTATCTGAATTACGAAGCTAAATCTATATCTGAGGAATAAGTGGCCTCAACAGCAGGCAGAAAGCATATAAAGAACTAGGTAACTGTGTTAGGAGGAGAAAAGTCAGCTGGGGGGCAGGGGAGAG----------CACCTACCCATACCTAGCACAGGGCA s panTro4.chr22 34562555 241 + 49737984 taaattatagttgatgttatCGGCGTCATTGCTGTCGTCGTCATCATCATTATCTCTGATAATT---GAAGGACATTTAAAAGAGATTGAGAATTATCTGAATTACGAAGCTAAATCTATATCTGAGGAATAAGTGGCCTCAACAGGAGGCAGAAAGCATATAAAGAACTAGGTAATTGTGTTAGGAGGAGAAAAGTCAGCTGGGGGGCAGGGGAGAA----------CACCTACCCATACCTAGCACAGGGCA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30975931 241 + 46535552 taaattatagttgatgttatCGGCGTCATTGCTGTCGTCGTCATCATCATCATCTCTGATAATT---GAAGGACATTTAAAAGAGATTGAGAATTATCTGAATTATGAAGCTAAATCTATATCTGAGGAATAAGTGGCCTCAACAGGAGGCAGAAAGCATATAAAGAACTAGGTAATTGTGTTAGGAGGAGAAAAGTCAGCTGGGGGGCAGGGGAGAG----------CACCTACCCATACCTAGCACAGGGCA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100533552 241 - 115148730 taaatTATAGCTGCTGTTATCAGCGTCATTGCTGTCGTCCTCATCATCATCATCTCTGATAATT---GAAGGACATTTAAAAGAGATTGAGAATTATCTGAATTATGAAGCTAAATCTATATCTGAAGAATAAGTGGCCTCAACAGGAGGCAGAAAGCATATAAAAAACTAGGTAATTGTGTTAGGAGGAGAAAAGGCAGCTGGGGGGCAGGGGAGAG----------CACCTACCCATACCTAGCACAGGGCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80680090 237 + 95678458 taaatTATAGCTGCTGTTATCAGCGTCATTGCTGTCGTTGTCATCATC---ATCTCTGATAATT---GAAGGACATTTAAAACAGATTGAGAATTATCCGAATTACGAAGCTAAATCTATATCTGAGGAATAAGTGGCCTCAGCAGGAGGCAGAACGCATATAAAGAACTATGCAATTGTGTTAGGAGGAGAAAAGGCAGCTGAGGGGCAGGGGAGAG----------CACCTA-CCATACCTAGCACAGGGCA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81106155 237 - 96509753 taaatTATAGCTGCTGTTATCAGCGTCATTGCTGTCGTTGTCATCATC---ATCTCTGATAATT---GAAGGACATTTAAAACAGATTGAGAATTATCCGAATTACGAAGCTAAATCTATATCTGAGGAATAAGTGGCCTCAGCAGGAGGCAGAACGCATATAAAGAACTATGCAATTGTGTTAGGAGGAGAAAAGGCAGCTGAGGGGCAGGGGAGAG----------CACCTA-CCATACCTAGCACAGGGCA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76363606 234 + 90941950 TAAATTATAGCTGCTGTTATCAGCGTCATTGCTGTC---GTCATCATC---ATCTCTGATAATT---GAAGGACATTTAAAACAGATTGAGAATTATCCAAATTACGAAGCTAAATCTATATCTGAGGAATAAGTGGCCTCAACAGGAGGCAGAACGCATATAAAGAACTATGCAATTGTGTTAGGAGGAGAAAAGGCAGCTGAGGGGCAGGGGAGAG----------CACCTA-CCATACCTAGCACAGggca i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18631480 234 + 33263144 taaatTATAGCTGCTGTTATCAGCGCCATTGCTGTCGTCGTCATCATC---ATCTCTGATAATT---GAAGGACATTTAAAACAGATTGAGAATTATCCGAATTATGAAGCTAAATCTATATCTGAGGAATAAGTGGCCTCAACAGGAGGCAGAATGCATATAAAGAACTATGCAATTGTGTT---AGGAGAAAAGGCAGCTAAGGGGCAGGGAAGAG----------CACCTA-CCATACCTAGCACAGGGCA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198334639 231 + 210400635 taaattatagctgctgttaCCGGCATCATTGCTGTCATCGTCATC------ATCTCTGATAACT---GAAGGACATTTAAAAGAGATTGAGAATTATCTGAATTATGAAGCTAAATCTATATCTGAGGAATAAGTGGCCTCAACAGGAGGCAGAAAGCATATAAAGAACTCTGTAATTGTGTTAGGCAGAGAAAAGGCAGCTG-GGGGCAGGGGAGAG----------CACCTACACATACCTAGCACAGG--- i calJac3.chr1 C 0 C 0 s canFam3.chr10 40953151 248 - 69331447 TAAGTTAGAGCTGCTCTTAC---CGTCACTGCCATCGTCATCAACATC---ATCTCTGATAATTTAGGAAGGGCGTTTAAAGGAGATTCAGAATTATCTGATTTATGAAGCCAGATCTATATCTGAAGGGTAAGTGGCCTCGATAGGAAGCAGAAAGCATGTGAAGAGCTATATAATTGTGTTAGAGGGAGGAAAGACAGTAGCGGGGAAGGAGGAAGGAAGAGGAAACTCCCACACATGTGCAGTGTAGGGCA i canFam3.chr10 C 0 C 0 e mm10.chr15 77172294 98 + 104043685 I a score=227118.000000 s hg38.chr22_KI270876v1_alt 184129 113 + 263666 TTTACGTTATTTTTGTAACATATTGTTGTTATTTTGTAAATATTTGTAACATTTTACAAAATATGTTATTTTTGCAAATATTTGTTATTTTGTAACATATTTATGTTATTTTT s panTro4.chr22 34562796 113 + 49737984 TTTATGTTATTTTTGTAACATATTGTTGTTATTTTGTAAATATTTGTAACATTTTACAAAATATGTTATTTTTGTAAATATTTGTTATTTTGTAACATATTTATGTTATTTTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30976172 113 + 46535552 TTTATGTTATTTTTGTAACATATTGTTGTTATTTTGTAAATATTTGTAACATTTTACAAAATATGTTATTTTTGTAAATATTTGTTATTTTGTAACATATTTACGTTATTTTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100533793 108 - 115148730 TTT--GTTATTTTTGTAACATATTGTTGTTATTTTGTAAATATTTGTAACATTTTACAAAACATGTTATTTTTGTAAATAT---TTATTTTGTAACATATTTATGTTATTTTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80680327 112 + 95678458 TTTTTGTTATTTTTGTAGCATATTTATGTTATTTTGTAAATATTTGTAACATATTTTACAAAATGTTA-TTTTGTAAATATTTGTTATTTTGTAACATATTTATGTTATTTTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81106392 112 - 96509753 TTTTTGTTATTTTTGTAGCATATTTATGTTATTTTGTAAATATTTGTAACATATTTTACAAAATGTTA-TTTTGTAAATATTTGTTATTTTGTAACATATTTATGTTATTTTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76363840 112 + 90941950 tttttgttatttttgtagcatatttatgttattttgtaaatatttgtaacatattttacaaaatgtta-ttttgtaaatatttgttattttgtaacatatttatgttattttt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18631714 112 + 33263144 TTTTTGTTATTTTTGTAGCATATTTATGTTATTTTGTAAATATTTGTAACATATTTTACAAAATGTTA-TTTTGTAAATATTTGTTATTTTGTAACATATTTATGTTATTTTT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198334870 35 + 210400635 --------------GTAATACATT----------------TCTTCATTACATA----------------------------------------AACGTATTTCTG-------- i calJac3.chr1 C 0 C 0 e mm10.chr15 77172294 98 + 104043685 I e canFam3.chr10 40953399 0 - 69331447 C a score=302990.000000 s hg38.chr22_KI270876v1_alt 184242 99 + 263666 GTAAATTTATGTTACATTTCTGTAACA----TAAATCAAGTGAGAAGACTACCCTTGACCAAGAAGGGAATATCAATAAATAAAGGAGGAGAGAAAATTGAAG s panTro4.chr22 34562909 99 + 49737984 GTAAATTTATGTTACATTTCTGTAACA----TAAATCAAGTGAGAAGACTATGCTTGACCAAGAAGGGAATATCAATAAATAAAGGAGGAGAGAAAATTGAAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30976285 98 + 46535552 GTAAATTTATGTTACATTTCTGTAACA----TAAATCAAGTGAGAAGACTATGCTTGACCAAGAAGGGAATATCAATAAATAAAGGAGGAGA-AAAACTGAAG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100533901 99 - 115148730 ATAAATTTATGTTACATTTCTGTAACA----TAAATCAAGTGAGAAGATTATGCTTGACCAAAAAGGGAATATCAATAAATAAAGGAGGAGAGAAAATTGAAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80680439 97 + 95678458 GTAAATC--TGTTACATTTCTGTAACA----TAAATCAAGTGAGAGGACCATGCTTGACCAAGAAGGGAATATCAATAAATAGAGGAGGAGAGAAAACTGAAG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81106504 97 - 96509753 GTAAATC--TGTTACATTTCTGTAACA----TAAATCAAGTGAGAGGACCATGCTTGACCAAGAAGGGAATATCAATAAATAGAGGAGGAGAGAAAACTGAAG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76363952 97 + 90941950 gtaaaTC--TGTTACATTTCTGTAACA----TAAATCAAGTGAGAGGACCATGCTTGACCAAGAAGGGAATATCAATaaatagaggaggagagaaaactgAAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18631826 97 + 33263144 GTAAATC--TGTTACATTTCTGTAACA----TAAATCAAGTGAGAGGACCATGCTTGACCAAGAAGGGAATATCAATAAATAGAGGAGGAGAGAAAACTGAAG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198334905 85 + 210400635 ---------TATTACAT-----AAACA----TAAATCAAGTGAGAAGACCATGCCTGACAAACAAGGGATTATCAATAAATAAAGGAAAAGAGAACACTGAAG i calJac3.chr1 C 0 I 310 s canFam3.chr10 40953399 92 - 69331447 -----------ATGCACTTCTGTCAGATTACTCAGTCAAGTGAGAAGACCACGCTTGACCAGGACGGCAATATGAATATGTAAAGGAGCAGAGAAAGTACAAG i canFam3.chr10 C 0 C 0 e mm10.chr15 77172294 98 + 104043685 I a score=201209.000000 s hg38.chr22_KI270876v1_alt 184341 62 + 263666 TGATTTTTATGCCAAAGCAAATTTCCTTAAGCACAAAGCAGGCAACATGTTCTCTCTTT--AAC---- s panTro4.chr22 34563008 62 + 49737984 TGATTTTTATGCCAAAGCAAATTTCCTTAAGCACAAAGCAGGCAACAGGTTCTCTCTTT--AAC---- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30976383 62 + 46535552 TGATTTTTATGCCAAAGCAAATCTCCTTAAGCACAAAGCAAGCAACATGTTCTCTCTTT--AAC---- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100534000 62 - 115148730 TGACTTTTATGCCAAAGCAAATCTCCTTAAGCACAAAGCAGGCAACATGTTCTCTGTTT--AAC---- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80680536 59 + 95678458 AGATTTTTATGCCAAAGCAAATCTC---AAGCACAAAGCAGGCAACATGTTCTCTCTTT--AAC---- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81106601 59 - 96509753 AGATTTTTATGCCAAAGCAAATCTC---AAGCACAAAGCAGGCAACATGTTCTCTCTTT--AAC---- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76364049 59 + 90941950 AGATTTTTATGCCAAAGCAAATCTC---AAGCACAAAGCAGGCAACATGTTCTCTCTTT--AAC---- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18631923 59 + 33263144 AGATTTTTATGCCAAAGCAAATCTC---AAGCACAAAGCAGGCAACATGTTCTCTCTTT--AAC---- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198335300 63 + 210400635 TGATTTTTATGGCAAAGCAAATCTCTTCAAGCACAAAGCAGGTAACATGTTCTCTCTTT-AAAT---- i calJac3.chr1 I 310 C 0 s canFam3.chr10 40953491 68 - 69331447 TGATTTTTATCTCAAAGCACATCTCCTTGAGTGCAAAGCAGGTAACATGTTCTTTCTTTTTAACTGAC i canFam3.chr10 C 0 C 0 e mm10.chr15 77172294 98 + 104043685 I a score=3485771.000000 s hg38.chr22_KI270876v1_alt 184403 904 + 263666 AGTACCGAAAAACAATAAGAAGCCATTCTCTTGCGTTCAAAATAAAAAGCTAATCCAAAAAGGCGGCCAGGGTGTCTTGAGCGTGTACCTGCCCCTCTTCTTGGATTGTGT---TCACTATGC-TCATGCCTTACAGATGAGCTGTCAGGAATCTGACAGCTGCACCTGACTCTCATACCTACTGGGGATAGAGACAGGGCTCTAAGAGCAGCAATGTAGCAGTTGTGGGAATCCTTGGGTTAGCACTAGCCCCTTGATCCATTCAGACCTGTAATCTCTTCTGACTTTGATTTAATGCAGCAATTACTGGTAATGTGGTTTGAAGGAGATAAATGCCCAGTGTAGCCAGCTGTCGTTTACCCTGCTCACGATGCAAGAATATTTTTAAATTAAAATTCCCTTTATGATAAAGGAGCTGCTTCACTGAATGTTTCTGTGCAGCTCTGATATGGAACTTCCCCCAAAGCGGATTAGAAATCGAAGTTGCCCCTCCTCACTTCGGGCAAAGCATGCATATATACAATTACTCCAACACCTAAAGTGAGTTCCTTAACCCTAAA---TTTCCCATTTATACAATTAGATCCTGGTAAAAACTTCTT-CTGCTTCTC-AGA-T--CAGTGTCAGCATTACATGATTTTCATTAATAATGATTCATCT---GT--TTTT---GCAAACATATTCTCTTA-----------------------------------------------------------------ATTTCCTTTTAAATTAATATGCAAAGTAAACATTCATAATCATATATGCATAAAAGACC-----------------------TTTTTACCTATTTCACTTGGAAAAAATAAAGTAC----------------------AGCTGAACATAAAA------------------------TATCAAAAAAT---AAAGCCAGTTT-TATTTTAACTCATAA-TACAATGTTTTGC-TACACTTTTTATATCTAGGA--ATCTGAGTAATTAAGTCATAA-------GTGAAAT--------------AAACATAGAAGGGTT--------------------------------------------------------------------------------------------------CATAGTACCT s panTro4.chr22 34563070 906 + 49737984 AGTACCGAAAAACAATAAGAAGCCATTCTCTTGCGTTCAAAATAAAAAGCTAATCCAAAAAGGCGGCCAGGGTGTCTTGAGCGTGTACCTGCCCCTCTTTTTGGATTGTGT---TCACTATGC-TCATGCCTTACAGATGAGCTGTCAGGCATCTGACAGCTGCACCTGACTCTCATACCTACTGGGGACAGAGACAGGGCTCTAAGAGCAGCAATGTAGCAGTTGTGGGAATCCTTGGGTTAGCACTAGCCCCTTGATCCATTCAGACCTGTAATCTCTTCTGACTTTGATTTAATGCAGCAATTACTGGTAATGTGGTTTGAAGGAGATAAATGCCCAGTGTAGCCGGCTGTCGTTTACCCTGCTCACGATGCAAGAATATTTTTAAATTAAAAGTCCCTTTATGATAAAGGAGCTGCTTCACTGAATGTTTCTGTGCAGCTCTGATATGGAACTTCCCCCAAAGCGGATTAGAAATCAAAGTTGCCCCTCCTCACTTCTGGCAAAGCATGCATATATACAATTACTCCAACATCTAAAATGAGTTCCTTAACCCTAAA---TTTCCCATTTATACAATTAGATCCTGGTAAAAACTTCTT-CTGCTTCTC-AGA-TCACAGTGTCAGCATTACATGATTTTCATTAATAATGATTCATCT---GT--TTTT---GCAAACATATTCCCTTA-----------------------------------------------------------------ATTTCCTTTTAAATTAATATGCAAAGTAAACATTCATAATCATATATGCATAAAAGACC-----------------------TTTTTACCTATTTCACTTGGAAAAAATAAAGTAC----------------------AGCTGAACATAAAA------------------------TATCAAAAAAT---AAAGCCAGTTT-TATTTTAACTCATAA-TACAATGTTTTGC-TACATTTTTTATATCTAGGA--ATCTGAGTAATTAAGTCATAA-------GTGAAAT--------------AAACATAGAAGTGTT--------------------------------------------------------------------------------------------------CATAGTACCT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30976445 909 + 46535552 AGTACTGAAAAACAGTAAGAAGCCATTCTCTTGCGTTCAAAATAAAAAGCTAACCCAAAAAGGCAGCCAGGGTGTCTTGAGCATGTACCTGCCCCTCTTCTTGGATTGTGT---TCACTATGC-TCATGCCTTACAGATGAACTGTCAGGAATCTGACAGCTGCACCTGATGTTCATACCTACTGGAGACAGAGACAGGGCTCTAAGAGCAGCAATGTAGCAGTTGTGGGAATCTTTGGGTTAGCACTAGCCCCTTGATCCATTCAGACCTGTAATCTCTTCTGACTTTGATTTAATGCAGCAATTACTGGTAATGTGGTTTGAAGGAGATAAATGCCCAGTGTAGCCGGCTGTCGTTTACCCTGCTCATGATACAAGAACATTTTTAAATTAAAATTCCCTTTATGATAAAGGAGCTGCTTCACTGAATGTTTCTGTGCAGCTCTGATATGGAACTTCCCCCAAAGCGGATTAGAAATCAAAGTTGCCCCTCCTCACTTCTGGCAAAGCATGCATATATACAATTACTCCATCACCTAAAGTGAGTTCCTTAACCCTAAA-TTTTTCCCATTTATACAATTAGATCCTGGTAAAAACTTCTT-CTGCTTCTC-AGA-TCACAGTGTCAGCATTACATGATTTTCATTAATAATGATTCATCT---GT--TTTT---GCAAACAAATTCCCTTA-----------------------------------------------------------------ATTTCCTTTTAAATTAATATGCAAGGTAAACATTCATAATCATATATGCATAAAAGA-C-----------------------TTTTTACCTATTTCACTTGGAAAAAATAAAGTAC----------------------AGCTGAATATAAAA------------------------TATCAAAAAAT---AAAGCCAGTTT-TATTTTAACTCATAA-TACAATGTTTTGC-TACACTTTTTATATCTAGGACTCTCTGAGTAATTAAGTCATAA-------GTGAAAT--------------AAACATAGAAGGGTT--------------------------------------------------------------------------------------------------TATAGTGTCT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100534062 903 - 115148730 AGTATCAACAAACAATAAGAAGCCATTCTCTTGCGTTCAAAATAAAAAGCTAACCCAAAAAGGTGGCCAGGGTGTCTTGAGCATGTACCTGCCCCTCTTCTTGGATTGTGT---TCACTATGC-TCATGCCTTACAGATGAACTGTCAGGAATCTGACCGCTGCACCTGACTCTCATACCTACTGGGGACAGAGACAGGGCTCTAAGAGCAGCAATGTAGCAGTTGTGGGAATCCTTGGGTTAGCACTAGCCCCTTGATCCATTCAGACCTGTAATCTCTTCTAACTTTGATTTAATGCAGCAATTACTGGTAATGTGGTTGGAAGGATATAAATGCCCAGTGTAGCCGGCTGTCGTTTACCCTGCTCACGATGCAAGAACATTTTTAAATTAAAATTCCCTTTATGATAAAAGAGCTGCTTCACTGAATGTTTCTGTGCAGCTCTGATATGAAACTTCCCCCAAAGCGGATTAGAAATCAAAGTTGCCCCTCCTCACTTCTGGCAAAGCATGCATATATACAATTACTCCATCACCTAAAGTGAGTTCCTTAACCCTACA-TTTTTCCCATTTATACAATTAGATCCTGGTAAAAACTTCTT-CTGCTTCTC-AGA-TCACAGTGTCAGCATTACATGATTTTCATTAATAATGATTCATCT---GT--TTTT---GCAAACAAATTCCCTTA-----------------------------------------------------------------ATTTCCTTTTAAATTAATATGCAAAGTAAACATTCATAATCATATATGCATGAAACA-C-----------------------TTTTTACCTTTTTCACTTGGAAAAA------TAT----------------------AGCTGAATATAAAA------------------------TATCAAAAAAT---AAAGCTAGTTT-TATTTTAACTCATAC-TACAACGTTTTGC-TACACTTTTTATATCTAGGAATCTTTGAGTAATTAAGTCTTAA-------GTGAAAT--------------AAACATAGAAGGGTT--------------------------------------------------------------------------------------------------CATAGTGTCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80680595 901 + 95678458 AGTACCGAAAAACAATAAGAAGCCATTCTCTTGCATTCAAAATAAAAAGCTAACCCAAAAAGGCGGCCATGGTGTCTTGAGCATGTACCTGTCCCTCTTCTTGGATTGTGT---TCACTATGC-TCATGCCTTACA---GAACTGTCAGGAATCTGACAGCTGCACCTGACTCTCATACCTACTGGGGACAGAGACAGGGCTCTGAGAGCAGCAATGCAGCAGTTGTGGGAATCCTTGGGTTAGCACTAGCCCCTTGATCCATTCAGACCTGTAATCTCTTCTGACTTTGATTTAATGCAGCAATTACTGGTAATGTGGTTTGAAGGAGATAAATACCCAGTGTAGCCGGCTGTCGTTTACCCTGCTCACGATGCAAGAACATTTTTAAATTAAAATTCCCTTTATGATAAAGGAGCTGCTTCACTGAATGTTTCTGTGCAGCTCTGATACGGAACTTCCCCCAAAGCGGATTAGAAATCAAAGTTGCCCCTCCTCACTTCTGGCAAAGCATGCATATATACAATTACTCCATCACCTAAAGTGAGTTCTTTAACTCTAAA-TTTTTCTCGTTTATACAATTAGATCCTGGTAAAAACTTCTT-CTGCTTCTC-AGA-TCACAGTGTCAGCATTACATGATTTTCATTAATAATGATACATCT---GT--TTTT---GCAAACAAATTCCTTTA-----------------------------------------------------------------ATTTCCTTTTAAATTAATATGCAAAGTAAACATTCATAATCATATATGCATAAAAGA-C-----------------------TCTTTACCCATTTCACCTGGAAAAAA-----TAT----------------------AGCTGAATATAAAA------------------------TATCAAAAAAT---AAAGCCAGTTT-TATTTTAACTCATAA-TACAACATTTTGC-TACACTTTTTATATCTAGGAATCTTTGAGTAATTAAGTCATAA-------GTGAAAT--------------AAACATAGAAGGGTT--------------------------------------------------------------------------------------------------CATAGTGCCT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81106660 901 - 96509753 AGTACCGAAAAACAATAAGAAGCCATTCTCTTGCATTCAATATAAAAAGCTAACCCAAAAAGGCGGCCATGGTGTCTTGAGCATGTACCTGTCCCTCTTCTTGGATTGTGT---TCACTATGC-TCATGCCTTACA---GAACTGTCAGGAATCTGACAGCTGCACCTGACTCTCATACCTACTGGGGACAGAGACAGGGCTCTGAGAGCAGCAATGCAGCAGTTGTGGGAATCCTTGGGTTAGCACTAGCCCCTTGATCCATTCAGACCTGTAATCTCTTCTGACTTTGATTTAATGCAGCAATTACTGGTAATGTGGTTTGAAGGAGATAAATACCCAGTGTAGCCGGCTGTCGTTTACCCTGCTCACGATGCAAGAACATTTTTAAATTAAAATTCCCTTTATGATAAAGGAGCTGCTTCACTGAATGTTTCTGTGCAGCTCTGATACGGAACTTCCCCCAAAGCGGATTAGAAATCAAAGTTGCCCCTCCTCACTTCTGGCAAAGCATGCATATATACAATTACTCCATCACCTAAAGTGAGTTCTTTAACTCTAAA-TTTTTCTCGTTTATACAATTAGATCCTGGTAAAAACTTCTT-CTGCTTCTC-AGA-TCACAGTGTCAGCATTACATGATTTTCATTAATAATGATACATCT---GT--TTTT---GCAAACAAATTCCTTTA-----------------------------------------------------------------ATTTCCTTTTAAATTAATATGCAAAGTAAACATTCATAATCATATATGCATAAAAGA-C-----------------------TCTTTACCCATTTCACCTGGAAAAAA-----TAT----------------------AGCTGAATATAAAA------------------------TATCAAAAAAT---AAAGCCAGTTT-TATTTTAACTCATAA-TACAACATTTTGC-TACACTTTTTATATCTAGGAATCTTTGAGTAATTAAGTCATAA-------GTGAAAT--------------AAACATAGAAGGGTT--------------------------------------------------------------------------------------------------CATAGTGCCT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76364108 906 + 90941950 AGTACCGAAAAACAGTAAGAAGCCATTCTCttgcattcaaaataaaaagctaaccCAAAAAGGCGGCCATGGTGTCTTGAGCATGTACCTGTCCCTCTTCTTGGATTGTGT---TCACTATGC-TCATGCCTTACA---GAACTGTCAGGAATCTGACAGCTGCACCTGACTCTCATACCTACTGGGGACAGAGACAGGGCTCTGGGAGCAGCAATGCAGCAGTTGTGGGAATCCTTGGGTTAGCACTAGCCCCTTGATCCATTCAGACCTGTAATCTCTTCTGACTTTGATTTAATGCAGCAATTACTGGTAATGTGGTTTGAAGGAGATAAATACCCAGTGTAGCCGGCTGTCGTTTACCCTGCTCACGATgcaagaacatttttaaattaaaattcccTTTATGATAAAGGAGCTGCTTCACTGAATGTTTCTGTGCAGCTCTGATACGGAACTTCCCCCAAAGCGGATTAGAAATCAAAGTTGCCCCTCCTCACTTCTGGCAAAGCATGCATATATACAATTACTCTATCATCTAAAGTGAGTTCTTTAACTCTAAA-TTTTTCTCGTTTATACAATTAGATCCTGGTAAAAACTTCTT-CTGCTTCTC-AGA-TCACAGTGTCAGCATTACATGATTTTCATTAATAATGATACATCT---GT--TTTT---GCAAACAAAttccttta-----------------------------------------------------------------atttccttttgaatTAATATGCAAAGTAAACATTCATAATCATATATGCATAAAAGA-C-----------------------TTTTTACCCATTTCAcctggaaaaaataaagtat----------------------agctgaatacaaaa------------------------tatcaaaaaat---aaagccAGTTT-TATTTTAACTCATAA-TACAACATTTTGC-TACACTTTTTATATCTAGGAATCTTTGAGTAATTAAGTCATAA-------GTGAAAT--------------AAACATAGAAGGGTT--------------------------------------------------------------------------------------------------CATAGTGCCT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18631982 906 + 33263144 AGTACCGAAAAACAATAAGGAGCCATTCTCTTGCGTTCAAAATAAAAAGCTAACCCAAAAAGGCGGCCATGGTGTCTTGAGCATGTACCTGTTCCTCTTCTTGGATTGTGT---TCACTATGC-TCATGCCTTACA---GAACTGTCAGGAATCTGACAGCTGCACCTGACTCTCATACCTACTGGGGACAGAGACAGGGCTCTGAGAGCAGCAATGCAGCAGTTGTGGGAATCCTTGGGTTAGCACTACCCCCTTGATCCATTCAGACCTGTAATCTTTTCTGACTTTGATTTAATGCAGCAATTACTGGTAATGTGGTTTGAAGGAGATAAATGCCCAGTGTAGCCGGCTGTCGTTTACCCTGCTCACGATGCAAGAACATTTTTAAATTAAAATTCCCTTTATGATAAAGGAGCTGCTTCACTGAATGTTTCTGTGCAGCTCTGATATGGAACTTCCCCCAAAGCGGATTAGAAATCAAAGTTGCCCCTCCTCACTTCTGGCAAAGCATGCATATATACAATTACTCCATCATCTAAAGTGAGTTCCTTAACCCTAAA-TTTTTCTCGTTTATACAATTAGATCCTGGTAAAAACTTCTT-CTGCTTCTC-AGA-TCACAGTGTCAGCATTACATGATTTTCATTAATAATGATTCATCT---GT--TTTT---GCAAACAAATTCCTTTA-----------------------------------------------------------------ATTTCCTTTTAAATTAATACGCAAAGTAAACATTCATAATCATATATGCATAAAAGA-C-----------------------TTTTTACCCATTTCACCTGGAAAAAATAAAGTAT----------------------AGCTGAATATAAAA------------------------TATCAAAAAAT---AAAGCCAGTTT-TATTTTAACTCATAA-TACAACATTTTGC-TACACTTTTTATATCTAGGAATCTTTGAGTAATTAAGTCATAA-------GTGAAAT--------------AAACATAGAAGGGTT--------------------------------------------------------------------------------------------------CATAGTGCCT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198335363 909 + 210400635 AGTACTGAAAAACAGTCAGAAGGAATTCTC--GCGTTCAAAATAAAAAACTAGCCCAAAAAGGAGGACATGGCATCTTGAGAATGTAACTGTCCCTCTTCTTGGACTGTGT---TCACTATGC-TCATGCCTTACAGATGAACTGCCAGGCATCTGACAGCTGCACCTGACTATCCTACCTACTGGGGACTGAAACAGGGCTCCGAGAGCAGCAATGCAGCAGTTGTGGGAATCCTTGGGTTAGCACTAGTCCCTTTATCCATTCAGACCTGTAATCTCTTCTGACTTTGATTTAATGTAGCAATTACTGGTAATGTGGTTTGAAGGAGATAAATGCCCAGCATAGCCGGCTGTCGTTTACTCTGCTCATGATGCAAGAACATTTTTAAATTAAAATCCCCTTTATGGTAAAGGAGCTGCTTCACTGAATGTTTCTGTGCTGCTCTGATATGGAACTTCCCCCAAAGCGGATTAGAAATCAAAGCTGCCCCTCCTCACTTCTGGCAAAGCATGCTTATATACAATTACTTCATCACCTAAAGTGAGTTCCTTAACCCTAAA-TTTTTCCGATTTATACAATTAGATCCTGGTAAGAATTTCTT-CTGCTTCTC-GGA-TCACAGTGTCAGCATTACACAATTTTCATTAACAATGATTCATCT---CTCATTTT---GCAAACAAATTGCTGTA-----------------------------------------------------------------ATTTTCTTTTAAATTAATATGCAAAGGAAACATTCATAAACACACAGGCATAAAAAA-C-----------------------TTTTTGCCCATTTGACTTGGAAAAGATAAAGTAC----------------------AGCTAAATATAAAA------------------------TATC-AAAACT---AAAGCCAGTTTCTTCTTTAACTTATAA-TACGAAGTTTTGC-TACACTTTTTATATCTAGGAATCTTTTAATAATTAAGTCATAA-------GTGAAAT--------------AAACATAGACAGGTT--------------------------------------------------------------------------------------------------CATCATGTCT i calJac3.chr1 C 0 C 0 s mm10.chr15 77172392 940 + 104043685 AGTACC-AAATACACT-AGAAGCACCCCCACCAAGTCCAATATAAAGAGTTAAT-GGAAAAGGGGACTGTAGTGTGTTGGAAGTATGGCTG--CCTCTTCCCAGACTGCATTTATCACTCTGCATCCTACAGTGCATACGAACAATCAGCCATCAGG-----GCA----GCTCTCATTCCCACT-GAGAGAGGGGCAGGGCT--GACAGCAGCAGTGGGGCGG-TGTGGGAACCCTCAGGTTGGCACCAGCCCCTTGCTCTATTCAGACCTGTAATCTCTTCTGACTTTGATTTAATGCAGCAATTACTGGTAATGTGGTTTGAAGGAGATAAATGCCCAGTGTAGCTGTCTGTCGCTTACTCTGCTCATGATGCAAGAACATTTTTAAATTAAAATTCCCTTTATGATAAAGGAGCTGCTTCACTGAATGTTCCTGTGCAGGCCTGATACGGAGCAT-CCCCAAAGAGGATTAGAAACTAACACCCTCCCTCC-----------------------TGCACAATTACCCTAA-ACCTAAAGT-AGGTCCTTAACCCTAAAGTTTTTCTCATTTATATAATTACAGTCT---------TCTTT-CTACTTTTCAAGA-TCATGATGTCAGCATTAGAGAAT-----CCACTAAAGATTCAGCT---CT--CTTTTTGGTAAAGAAATTATCTTA-----------------------------------------------------------------AGTTCCTTTAAAATAAATAAGCAAAGTAAACATTCATG--CACACATGCCTAAATGA-CACTGTAGCAGGTAAGTGGCTGATCCTCTAACTCTAACTCTTGGGAAGAACACAAGATAAAGGCGAGCTACCTAGTGAGAAGTTGTCCTTAAAAGGGGGCAGGGGAAATGACTCAATTCATTGAAAAAT---AAATAAAGGCT-CCCTTGCCCCGACAGCCAGTTTGTTATGG-CATACTTTGTACATATGGAAATC---------TTAAGTCATAAGATTATTGTAAGATATTCTTAACCCTTAAGTCATGTAAGAACT--------------------------------------------------------------------------------------------------AAGAATATCT i mm10.chr15 I 98 C 0 s canFam3.chr10 40953559 1034 - 69331447 AGTACTGAAAAACAATGAGAAACCATTCCCTTGTGCTCAAAATAAACAGCTACCCCAAAGGGTAGGCCACAGGGTCTTG------------------------GATTGTGC---TCACTATGC-TTGCGCCTTACAGATGAACTGTCAGGCAT----------CACCTGACTCTCCTCCATTCCGGGGACTGGGACAAGGCTCTGATAGCAGCAATGCAGCAG-TGTGGGAATCCTTGGGTTGGCACGAGCCCCTTGCTCAATTCAGACCTGTAATCTCTTCTGACTTTGATTTAATGCAGCAATTACTGGTAATGTGGTTTGAAGGAGATAAATGCCCAGTGTAGCCGGCTGTCGCTTACTCTGCTCACGATGCAAGAACATTTTTTAATTAAAATTCTCTTTATGATAAAGGAGCTGCTTCACTGAACGTTTCTGTGCAGCCCTGATATGGAGCTCCCCCCAAAGCGGATTAGAAATCAAAGTCACCCCTCCTCACTTCTGGTAAAGCATGCACACACACAATCACTCCATCACCTAAAGTGAGTTCTTT-ACCCTAAA-TATTTCCCATTTATAGAATTAGATCCTGGTAACAACTTCTTGCCACTTCCC-ACAGTCTCAATGTCAGCATTACAGCCCTGCCAGTAATGAAGA--CATCTTGCAT--TTTT---GCAAAGACGTTCCCTTAAATACATTTCCCTTAATTTAAATAAAGTTCCCTTACATAAATACATAAGTTCTCTTAAATACTTTATTTCCTTTAAAATGAATATGCAAAGTAAACATTCATAACCATATATGCACCAAAAG-------------------------GCTGTACCTACTTCATTTGGAAGAAATAAAGGAT----------------------AGCTGAATATAAAA------------------------TACCAATAGATCTAAAGGCCAGTTT-------AATTCGTAA-TACCAAGGTTTACTTTCACTTTTTATATTTAGGAATCCTTGAGTAATT--GCTGTAA-------GTGAAAT--------------AATCATAGAAAGATTAAAATAgagcagcccgggtggctcagcagtttagcactgccttcggccccgggtgtgatcctggagacctgggatcgagtcccacatcaggctccctgcatggagcct i canFam3.chr10 C 0 I 127 a score=4862795.000000 s hg38.chr22_KI270876v1_alt 185307 1347 + 263666 ACCAGGGT-TTT-TTCCCCATGACCTGAAACCACTATAATATAGCAATTTAAGGAATTTACATAAGTTACTC----------------------------------------------------------------------------------------------AGT------------------------------------------------------------CCAGGTCAAAA-----CTGTATAATGTGGGCAAAT--CAGTTGAAAACAATGATGACAACCACCACCCAATAACTAGAG---GGAACATAATCATGTGAGGCCCCAAAGG----TGAACATTTGGTACAGGTTTACTGGTTGCTGAATCAATCAATAAAAGTTTTGATCTAATTCTCAAACTTCCCACCCCCAAAAGTAGAAATAAGAAAAATAATAACTTA----TACTTAGGATCTATTACTTTGATTGCTTGGAGAGGATGGTCACTGACAATTATCCTTT-----GAGAAATGAAAGAA------------ACAGAGCACAAGGTCTGAATCAGTTATATTGTGCAAAGT------AGAAAC--AGTGACTTAAGACCAAATGTGTATTTTCTTTTCCTAATGCACACAGCACCAGTTCAGGGCAAAGGTCAAAAG---CTAAGAAATGACTTTTTGTTCCA--CTATTAGAAAGCAGTGTCTCCATTGCAATTAATTCATCCAATATTTTTTGACTAAGAGCTTCTAA---------------------------------------------------------------------------ACTGAAATA-------ACATCCCACTTTCAGAAGAGTGCCATATGCCTTCTCAGGAAATCCAAGGCTAAGACTAGATTCCCTCTCAGGAGGCCCTGCCAAGACCTACTTTAATCTTAGGTTTAAGAATACAGAACTGATGTCATCCTTGCAATACTAATGCTACTCTGCAGAAGTATTCATGG-GTCTTTGGCTCTCTTTGAGAAAACTGATCTTCTCTTTC------------ATAGAAAGATAGATAACT---TTGGAAAAATAACTGTATGAATATATAC---------TACATAC------------------------------------------------atggatggatgga----------tggatggatgtatATCTCGGCCCTTGG-AAAAAAAGCCTGGCATGATTAATAAGATTAAAGAGGGATTTAGGATAAATAAGATGAAAGTTAGTATGATCCTTACAGGATTAAACCCTAAATCCTAGTATGAATCCAATGA-GTTTTTAAGATCAACACCATATAACAGGATTAAATCAATAGCCACTTTTGTTTT-ATATTGAAAACAATCATAGTTGGTAACACCA-GGCCTATAGCACCAATTCCTCAGTTAAACACTGAGGAGTTCAGGACTAA--ACAGGGGCTTTTCCTCTGACTAGGCTTGGTGACTGCCCTACCTACACAGGTCCAAAAACCCGTATCTTTAATTCCAGCGTTCAAAAAGCCTGGAAAACTAAGTTTCTTTCTTCACCATCCTTTTCCCCTCCCCCATCTTTA-----TTATTAT--T--TTTTTTTGATGGTGATAGAAGAGGGATTCACTTTGATAGAAGAG----GGATTCACTTAGTGACAAATGTGACCTAAACTAGTGTGGATAT s panTro4.chr22 34563976 1340 + 49737984 ACCAGGGT-TTT-TTCCCCATGACCTGAAACCACCATAATATAGCAATTTAAGGAATTTACATAAGTTACTC----------------------------------------------------------------------------------------------AGT------------------------------------------------------------CCAGGTCAAAA-----CTGTATAATGTGGGCAAAT--CAGTTGAAAACAATGATGACAACCACCACCCAATAACTAGAG---GGAACATAATCATGTGAGGCCCCAAAGG----TGAACATTTGGTACAGGTTTACTGGTTGCTGAATCAATCAATAAAAGTTTTGATCTAATTCTCAAACTTCCCACCCCCAAAAGTAGAAATAAGAAAAATAATAACTTA----TACTTAGGATCTATTACTTTGATTGCTTGGAGAGGATGGTCACTGACAATTATCCTTT-----GAGAAATGAAAGAA------------ACAGAGCACAAGGTCTGAATCAGTTATATTGTGCAAAGT------AGAAAC--AGTGACTTAAGACCAAATGTGTATTTTCTTTTCCTAATGCACACAGCACCAGTTCAGGGCAAAGGTCAAAAG---CTAAGAAATGACTTTTTGTTCCA--CTATTAGAAAGCAGTGCCTCCATTGCAATTAATTCATCCAATATTTTTTGACTAAGAGCTTCTAA---------------------------------------------------------------------------ACTGAAATA-------ACATCCCACTTTCAGAAGAGTGCCATATGCCTTCTCAGGAAATCCAAGGCTAAGACTAGATTCCCTCTCAGGAGGCCCTGCCAAGACCTACTTTAATCTTAGGTTTAAGAATACAGAACTGATGTCATCCTTGCAATACTAATGCTACTCTGCAGAAGTATTCATGG-GTCTTTGGCTCTCTTTGAGAAAACTGATCTTCTCTTTCAAAGAAAGAAGGATAGAAAGATAGATAACT---TTGGAAAAATAACTGTATGAATATATAC---------TACATAC------------------------------------------------atggatggatgga----------tggatggatgTATATCTCGGCCCTTGG-AAAAAAAGCCTGGCATGATTAATAAGATTAAAGAGGGATTTAGGATAAATAAGATGAAAGTTAGTATGATCCTTACAGGATTAAACCCTAAATCCTAGTATGAATCCAATGA-GTTTTTAAGATCAACACCACATAACAGGATTAAATCAATAGCCACTTTTGTTTT-ATATTGAAAACAATCATAGTTGGTAACACCA-GGTCTATAGCACCAATTCCTCAGTTAAACACTGAGGAGTTCAGGGCTAA--ACAGGGGCTTTTCCTCTGACTAGGCTTGGTGACTGCCCTACCTACACAGGTCCAAAAACCCGTATCTTTAATTCCAGCGTTCAAAAAGCCTGGAAAACTAAGTTTCTTTCTTCACCATCCTTTTCCCCTCCCCCATCttta-----ttattattat--tatttttGATGG---------------------TGATAGAAGAG----AGATTCACTTAGTGACAAATGTGACCTAAACCAGTGTTGATAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30977354 1343 + 46535552 ACCAGGGT-TTT-TTCTCCATGACATGAAATCACCATAATATAGCAATTTAAGGAATTTATGTAAGTTACTC----------------------------------------------------------------------------------------------AGT------------------------------------------------------------CCAGGTCAAAA-----CTGTATAATGTGGGCAAAT--TAGTTGAAAACAACGATGACAACCACCACCCAATAACTAGAG---GGAACATAATCATGTGAGGCGCCAAGGG----TGAACATTTGGTACAGGTTTACCGGTTGCTGAATCAATCAATAAAAGTTTTGATCTAATTCTCAAACTTCCCACCCCCAAAAGTAGAAATTAGAAAAATAATAACTTA----TACTTAGGATCTATTACTTCGATCGCTTGGAGAGGATGGTCACTGACAATTATCCTCT-----GAGAAATGAAAGAA------------ACAGAGCACAAGGTCTGAATCAGTTATACTGTGCAAAGT------AGAAAC--AGTGACTTAAGACCAAATGTGTATTTTCTTTTCCTAATGCACAAAGCACAAGTTCAGGGCAAAGGTCAAAAG---CTAAGAAATGACTTTTTGTTCCA--CTATTAGAAAGCAGTGTCTCCATTGCAATTAATTCATCTAATATTTTTTGACTAAGAGCTTCTAA---------------------------------------------------------------------------ACTCAAATA-------ACATCCCACTTTCAGAAGAGTGCCATATGCCTTCTCAGGAAATCCAAGGCTAAGACTAGATTCCCTCTCAGGAGGCCCTGCCAAGACCTACTTTAATCTTAGGTTTAAGAATACAGAACTGATGTCATCCTTGCAATACTAATGCTACTCTGCAGAAGTATTCACAG-CTCTTTGGCTCTCTTTGAGAAAACTGATCTTCTCTTTCAAAGAAAGAAGGATAGAAAGATAGATAACT---TTGGAAAAATAACTGTATGAATATATAC---------TACATAC------------------------------------------------atggatggatgga----------tggatggatgTATATGTTGGTCCTCGGAAAAAAAAGCCTGGCATGATTAATAAGATTAAAGAGGGATTTAGGATAAATAAGATGAAAGTTAGTATGATCCTTACAGGATTAAACCCTAAATCCTAGTATGAATCCAATAA-TTTTTTAAGATCAACACCATATAACAGGATTAAATCAATAGCCACTTTTGTTTT-ATATTGAAAACAATCATAGTTGGTAAAACCA-GGCCTATAGCACCAATTCCTCAGTTAAACACTGAGGAGTTCAGGGCTAA--ACAGGGGCTTTTACTCTGACTAGGCTTGGTGACTGCCCTACCTACACAGGTCCAAAAACCCGTATCTTTAATTCCAGCGTTCAGAAAGCCTGGAAAACTAAGTTTCTTTCTTCACCATCCTTTTCCCCTCCCCCATCttta-----ttattattattatttttttGATGG---------------------TGATAGAAGAG----GGATTCACTTAGTGACAAATGTGACCTAAACCAGTGTGGATAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100534965 1329 - 115148730 ACCAGGGT-TTT-TTCCCCATGACATGAAACCAACATAATATAGCAATTTAAGGAATTTACATAAGTTACTC----------------------------------------------------------------------------------------------AGT------------------------------------------------------------CCAGGTCAAAA-----CTGTATAATGTTGGCAAAC--TAGTTGAAAACAATGATGACAACCATCACCCAATAACTAGAG---GGAACATAATCATGTGAGGCACCAAGGG----TGAACAGTTGGTACAGGTTTACTGGTTGCTGAATCAATCAATAAAAGTTTTGATCTAATTCTCAAACTTCCCACCCCCAAAAGTAGAAATAAGAAAAATAATGACTTA----TACTTAGGATCTATTACTTTGATTGCTTGGAGAGGATGGTCACTGACAATTATCCTTT-----GAAAAATGAAAGAA------------ACAGAGCACAAGGTCTGAATCAGTTATATTGTGCAAAGT------AGAAAC--AGTGACTTAAGACCAAATGTGTATTTTCTTTTCCTAATGCACACAGCACAAGTTCAGGGCAAAGGTCAAAAG---CTAAGAACTGACTTTTTGTTCCA--CTGTAAGAAAGCAGTGTCTCCACTGCAATTAATTCATCTAATATTTTTTGACTAAGAGCTTCTAA---------------------------------------------------------------------------ACTCAAATA-------ACATCCCACTTTCAGAAGAGTGCCATATGCCTTCTCAGGAAATCCAAGGCTAAGACTAGATTCCCTCTCAGGAGGCCCTGCCAAGACCTACTTTAATCTTAGGTTTAAGAATACAGAACTGATGTCATCCTTGCAATACTAATGCTACTCTGCAGAAGTATTCATGG-CTCTTTGGCTCTCTTTGAGAAAACTGATCTTCTCTTTCAAAGAAAGG---ATAGAAAGATAGATAACT---TTGGAAAAATAACTGTATGAATATATAC---------TACATAC----------------------------------------------------ATGGATGAA----------TGTTTGGATGTATATCTTGGCTCTTGG-AAAAAAAGCCTGGCAGGATTAATAAGATTAAAGAGGGATTTAGGATAAATAAGATGAAAGTTAGTATGATCCTTACAGGATTAAACCCTAAATCCTAGTATGAATCCAATGA-TTTTTTAAGATCAACACCATATAACAGGATCAAATCAATAGCCACTTTTGTTTT-ATACTGAAAACAATCATAGTTGGTAAAACCA-GGCCTATAGCACCACTTCCTCAGTTAAACACTGAGGAGTTCAGGGCTAA--ACAGGGGCTTTTACTCTGACTAGGCTTGGTGACTGCCCTACCTACACAGGTCCAAAAACCCGTATCTTTAATTCCAGTGTTCAAAAAGCCTCAAAAACTAAGTGTCTTTCTTCACCATCCTTTTCCCCT-CCCCACCCTTA-----TTATTAT-----TATTTTTTATGG---------------------TGATAGAAGAG----GGATTCACTTAGTGACAAATGTGACCTAAACCAATGCGGATAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80681496 1390 + 95678458 ACCAGGGT-TTT-TTCCCCATGACACGAAACCATCATAATATAGCAATTTAAGG-ATTTACATAAGTTACTC----------------------------------------------------------------------------------------------AGT------------------------------------------------------------CCAGGTCAAAA-----CGGTATAATGTTGGCAAAC--TAGTTAAAAACTACGATGACAACCACCACCCAATAACTAGAG---GCAACATAATCATGTGAGGCCCCAAGGG----TGAACATTTAGTACAGGTTTACTGGTTGCTCAATCAATCAATAAAACTTTTGATCTAATTCTCAAACTTCCCACTCCCAAAAGTAGAAATAAGAAAAATAACAATTTA----TACTTAGGATCTATTACTTTGATTGCTTGGAGAGGATGGTCACTGACAATTATCCTTT-----GAAAAATGAAAGAA------------ACAGAATACAAGGTCTGAATCAGTTATACTCTGCAAGGTGACTTAAGAAGC--AGTGACTTAAGACCAAATGTGTATTTTCTTTTCCTAATGCACACAGCACAAGTTCAGGGCAAAGGTCAAAAG---CTAAGAACTGACTTTTTGTTCCA--CTATAAGAAAGCAGTATCTCAATCGCAATTAATTCATCTAATATTTTTTGACTAAGAGCTTCTAA---------------------------------------------------------------------------ACTCAAATA-------ACATCCCGCTTTCAGAAGAGTGCCATATGCCTTCTCAGGAAATCCAACGCTAAGACTAGATTCCCTCTCTGGAGGCCCTGCCAAGACCTACTTTAATCTTAGGTTTAAGAATACAGAACTGATGTCATCCTTGCAATACTAATGCTACTCTGCAGAAGTATGCATGG-CTCTTTGGCTCTCTTTGAGAAAACTGATCTTCTCTTTCAAAGAAAGAAGGACAGAA----AAATAACT---TTGGAAAAATAACTGTATGAATATATAC---------TATATACatggatggatggatggatggatggatggatggatggatggatggatggatggatggatgga----------tggatggatggatATCCCGGCCCTTGGAAAAAAAAGCCTGGCATGATTAACAAGATTAAAGAAGGATTTAGGATAAATAAGATGAAAGTTAGTATGATCCTTACAGGATTAAACCCCAAATCCTAGTATGAATCCAATGATTTTTTTAAGATCAACACCATATAACAGGATTAAATCAATAGCTGCTTTTGTTTT-ATATTGAAAACAATCACAGTTGGTAAAACCA-GGCCTCTAGCACCATTTCATCAGTTAAACACTGAGGAGTTCAGGGCTAAAGACAGGGGCTTTTACTCTGACTAGGCTTGGTGATTGCCCTACCTACACAGGTCCAAAAACCCGTATCTTTAATCCCAGCATTCAAAAAGCCTGGAAAACTAAGTTTCTTTCTTTACCATCCTTTTCCCATCCCCCATCTTTA-----TTA---------TTTTTTTGATGG---------------------TGATAGAAGGGGGACGGATTCACTTAGTGACAAATGTGACCTAAACCAATGTGGATAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81107561 1366 - 96509753 ACCAGGGT-TTT-TTCCCCATGACACGAAACCATCATAATATAGCAATTTAAGG-ATTTACATAAGTTACTC----------------------------------------------------------------------------------------------AGT------------------------------------------------------------CCAGGTCAAAA-----CGGTATAATGTTGGCAAAC--TAGTTAAAAACTACGATGACAACCACCACCCAATAACTAGAG---GCAACATAATCATGTGAGGCCCCAAGGG----TGAACATTTGGTACAGGTTTACTGGTTGCTCAATCAATCAATAAAACTTTTGATCTAATTCTCAAACTTCCCACTCCCAAAAGTAGAAATAAGAAAAATAACAATTTA----TACTTAGGATCTATTACTTTGATTGCTTGGAGAGGATGGTCACTGACAATTATCCTTT-----GAAAAATGAAAGAA------------ACAGAATACAAGGTCTGAATCAGTTATACTCTGCAAGGTGACTTAAGAAGC--AGTGACTTAAGACCAAATGTGTATTTTCTTTTCCTAATGCACACAGCACAAGTTCAGGGCAAAGGTCAAAAG---CTAAGAACTGACTTTTTGTTCCA--CTATAAGAAAGCAGTATCTCAATTGCAATTAATTCATCTAATATTTTTTGACTAAGAGCTTCTAA---------------------------------------------------------------------------ACTCAAATA-------ACATCCCGCTTTCAGAAGAGTGCCATATGCCTTCTCAGGAAATCCAACGCTAAGACTAGATTCCCTCTCTGGAGGCCCTGCCAAGACCTACTTTAATCTTAGGTTTAAGAATACAGAACTGATGTCATCCTTGCAATACTAATGCTACTCTGCAGAAGTATGCATGG-CTCTTTGGCTCTCTTTGAGAAAACTGATCTTCTCTTTCAAAGAAAGAAGGACAGAA----AAATAACT---TTGGAAAAATAACTGTATGAATATATAC---------TATATAC------------------------atggatggatggatggatggatggatggatggatgga----------tggatggatggatATCCCGGCCCTTGGAAAAAAAAGCCTGGCATGATTAACAAGATTAAAGAAGGATTTAGGATAAATAAGATGAAAGTTAGTATGATCCTTACAGGATTAAACCCCAAATCCTAGTATGAATCCAATGATTTTTTTAAGATCAACACCATATAACAGGATTAAATCAATAGCTGCTTTTGTTTT-ATATTGAAAACAATCACAGTTGATAAAACCA-GGCCTCTAGCACCATTTCATCAGTTAAACACTGAGGAGTTCAGGGCTAAAGACAGGGGCTTTTACTCTGACTAGGCTTGGTGATTGCCCTACCTACAAAGGTCCAAAAACCCGTATCTTTAATCCCAGCATTCAAAAAGCCTGGAAAACTAAGTTTCTTTCTTTACCATCCTTTTCCCATCCCCCATCTTTA-----TTA---------TTTTTTTGATGG---------------------TGATAGAAGGgggacggattcacttagtgacaaatgtgacctaaaccaatgtggatat i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76365014 1366 + 90941950 ACCAGGGT-TTT-TTCCCCATGACACGAAACCATCATAATATAGCAATTTAAGG-ATTAACATAAGTTACTC----------------------------------------------------------------------------------------------AGT------------------------------------------------------------CCAGGTCAAAA-----CGGTATAATGTTGGCAAAC--TAGTTAAAAACTACGATGACAACCACCACCCAATAACTAGAG---GCGACATAATCATGTGAGGCCCCAAGGG----TGAACATTTGGTACAGGTTTACTGGttgctcaatcaatcaataaaactTTTGATCTAATTCTCAAACTTCCCACTCCcaaaagtagaaataagaaaaataacaattta----tacTTAGGATCTATTACTTTGATTGCTTGGAGAGGATGGTCACTGACAATTAtccttt-----gaaaaatgaaagaa------------acagaacaCAAGGTCTGAATCAGTTATATTCTGCAAGGTGACTTAAGAAGC--AGTGACTTAAGaccaaatgtgtattttcttttcctaatgcACACAGCACAAGTTCAGGGCAAAGGTCAAAAG---CTAAGAACTGACTTTTTGTTCCA--CTATAAGAAAGCAGTATCTCAATTGCAATTAATTCATCTAATAtttttttACTAAGAGCTTCTAA---------------------------------------------------------------------------ACTCAAATA-------ACATCCCGCTTTCAGAAGAGTGCCATATGCCTTCTCAGGAAATCCAACGCTAAGACTAGATTCCCTCTCTGGAGGCCCTGCCAAGACCTACTTTAATCTTAGGTTTAAGAATACAGAACTGATGTCATCCTTGCAATACTAATGCTACTCTGCAGAAGTATGCATGG-CTCTTTGGCTCTCTTTGAGAAAACTGATCTTCTCTTTCAAAGAAAGGAGGACAGaa----aaataact---ttggaaaaataactgtatgaatatatac---------tatatac------------------------atggatggatggatggatggatggatggatggatgga----------tggatggatggctatCCCGGCCCTTGGaaaaaaaaGCCTGGCATGATTAACAAGATTAAAGAAGGATTTAGGATAAATAAGATGAAAGTTAGTATGATCCTTACAGGATTAAACCCCAAATCCTAGTATGAATCCAATGAtttttttAAGATCAACACCATATAACAGGATTAAATCAATAGctgcttttgtttt-atattgaAAACAATCACAGTTGGTAAAACCA-GGCCTCTAGCACCACTTCATCAGTTAAACACTGAGGAGTTCAGGGCTAAAGACAGGGGCTTTTACTCTGACTAGGCTTGGTGATTGCCCTACCTACACAGGTCCAAAAACCTGTATCTTTAATTCCAGCATTCAAAAAGCCTGGAAAACTAAGTTTCTTTCTTTACCATCCTTTTCCCATCccccatcttta-----tta---------tttttttgatgg---------------------tGATAGAAGGGGGACGGATTCACTTAGTGACAAATGTGACCTAAACTAATGTGGATAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18632888 1363 + 33263144 ACCAGGGT-TTT-TTCCCCATGACATGAAACCATCATAATATAGCAATTTAAGG-ATTTACATAAGTTACTC----------------------------------------------------------------------------------------------AGT------------------------------------------------------------CCAGGTCAAAA-----CTGTATAATGTTGGCAAAC--TAGTTGAAAATTACGATGACAACCACCACCCAATAACTAGAG---GCGACATAATCATGTGAGGCCCCAAGGG----TGAACATTTGGTACAGGTTTACTAGTTGCTCAATCAATCAATAAAACTTTTGATCTAATTCTCAAACTTCCCACTCCCAAAAGTAGAAATAAGAAAAATAACAATTTA----TTCTTAGGATCTATTACTTTGATTGCTTGGAGAGGATGGTCACTGACAATTATCCTTT-----GAAAAATGAAAGAA------------ACAGAACACAAGGTCTGAATCAGTTATATTCTGCAAGGTGACTTAAGAAGC--AGTGACTTAAGACCAAATGTGTATTTTCTTTTCCTAATGCACACAGCACAAGTTCAGGGCAAAGGTCAAAAG---CTAAGAACTGACTTTTTGTTCCA--CTATAAGAAAGCAGTATCTCAATTGCAATTAATTCATCTAATATTTTTTGACTGAGAGCTTCTAA---------------------------------------------------------------------------ACTCAAATA-------ACATCCCGCTTTCAGAAGAGTGCCATATGCCTTCTCAGGAAATCCAACGCTGAGACTAGATTCCCTCTCTGGAGGCCCTGCCAAGACCTACTTTAATCTTAGGTTTAAGAATACAGAACTGATGTCATCCTTGCAATACTAATGCTACTCTGCAGAAGTATGCATGG-CTCTTTGGCTCTCTTTGAGAAAACTGATCTTCTCTTTCAAAGAAAGGAGGACAGAA----AAATAACT---CTGGAAAAATAACTGTATGAATATATAC---------TATATAC----------------------------atggatggatggatggatggatggatggatgga----------tggatggatggatATCCCGGCCCTTGGAAAAAAAAGCCTGGCATGATTAACAAGATTAAAGAAGGACTTAGGATAAATAAGATGAAAGTTAGTATGATCCTTACAGGATTAAACCCCAAATCCTAGTATGAATCCAATGATTTTTTTAAGATCAACACCATATAACAGGATTAAATCAATAGCTGCTTTTGTTTT-ATATTGAAAACAATCACAGTTGGTAAAACCA-GGCCTCTAGCACCACTTCATCAGTTAAACACTGAGGAGTTCAGGGCTAAAGACAGGGGCTTCTACTCTGACTAGGCTTGGTGATTGCCCTACCTACAcaggtccaaaaacccgtatctttaattccagcattcaaaaagcctggaaaactaag----tttctttaCCATCCTTTTCCCATCCCCCATCtttatttttttt---------tttttttGATGG---------------------TGATAGAAGGGGGAGGGATTCACTTAGTGACAAATGTGACCTAAACCAATGTGGATAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198336272 1358 + 210400635 ACCACGG--TTT-TTCCCCATGACATAAAACCACCATAATGTAGCAACTTAAGGAATTTATGTTAGTTACTC----------------------------------------------------------------------------------------------AGT------------------------------------------------------------CTACATCAAAA-----CTGTATAATGTTGGCAAACTATAGTTGAAAACAATGATGAGAATCATCACTCAATAACTAGAG---GGAAAATAATCATGTGAAGCCTCAAGAG----GGAACATGTGGCACAGGTTTATTGGTTGCTGAATCAATCAACAAAACTTTTGATCTAATTCTAAAACTTGGCACCCCCAAAAGTAGAAATAAGAAAAGTAATAAC--A----TACTTAAGATATATCACTTTGATTGCTTGGAGAGGATGATCACTGACAATTACCCTTT-----GAAAAAAGAAAGAA------------ACAGAGCACAAGGTCTAAATCAGTTATATTCTGCAAAGT------AGAATC--AGTGACTTAAGGCCAAATGTGTATTTTCTTTTCCTAATGCACACAGCACAAGTTCAGGGCAAAAGTCAAAAG---CTAAGAACTGACTTTTTGTTCCA--CTATAAGAAAACAGTGTCTTAACTGCAATTAATTCATCTATTATTTTTTGACTAAGAGCTTCTAA---------------------------------------------------------------------------ACTCAAATA-------ACATCTCACTTTCAGAAGAGTGCCATATGCCTTCTCAGGAAATCCAAGGCTAAGACTAGATTCCCTCTCAGGAGGCCCTGCCAAGACCTACTTTAATCTTAGGTTTAAGAATACAGAACTGATGTCATCCTTGCAATACTAATGCTACTCTGCAGAACTATGCATGG-CTCTTTGGCTCTCTGTGAGAAAACTGATCTTCTCTTTCAAAGAAAGAAGGATAGAAAGACAGATAACT---TTGGAAAAATAATGGTATGAATATATAC---------TACATAT--------------------atggatggagggatggatggatggatggatggatggatgga----------tggatggatggatATCCTGGCTCTTGGGAAAAAAAGCCTGGCATGATTAATAAGATTAAAGAGGGATTTAGGATAAATAAGATGAAAGTCAGTATGATCCTTACAGGATTAAACCCCAAATCCTAGTATGAATCCAATGA-TTTTTTAAGATCAACACCATATAACAGGATTAAATCAATA-CCGCTTTTGTTTTCATATTGAAAATAATCACAGTTGGCAAAACCA-GGCCTATAGCACCACCTCATCAGTTAAACACTAGAGAGTTCAGGACTAAAAATAGGGGCTTTTACTCTGATTAGGCTTGGTGATTGCCCTACCTACACAGGTCCAAAAACCTGTATCTTTAATTCCAGCATTCAAAAAGCCTGGAAAACTAAGTTTCTTTCTTCACTATCCTTTTCCCCTCCCCCATCTT-------------------TTTTTTGGATGG---------------------TGATAGGAAAG----GGATTCACTTAGTGACAAATGTGACCTAAACTAATGCGGATAT i calJac3.chr1 C 0 C 0 s mm10.chr15 77173332 1529 + 104043685 CCTAGGGT-TTTCCTACCTACAACATCAAACCACCATCTTACAACAACTCAAAGATTCTGCACTAGACATTCCTGCTGGAAACTGCACACTAGGGTAAcaagaaggttctgtgggtgaaggcacctgtcaccaaacctgccctgaggtggatccccaggatctacaagtggaaaccatctcctgcacattgttctctgacctccacgcaggtactgtggcaggcTCCTCCCAGTTAAAAAAACCCCTGCATAATGGGGACAAGC--TAGTTAAACACAGACACTGGTGCTACTCTGTAGTAACTAGAG---TGCAAGCTACCA---AAGGGCCCGGGGAGCACGCACCATTTAGCACA--CTCAGTAGTTCTTGAGTCAATC-ATAACACTGCTGATCCAATTATGAAAGTTCCTACCTCCCAAAT-------------AATAATAATTTGTGGTTGCTTAAAACTTGCCATTTTGATCGCT-----GGGGTGGACAATAATGA-TATCCTTT-----GGAAAAGAAAAAAAAGGGGGGGAACTAGAGAGCATAAGGTTTCGTTCAGTTACAGTCTGCAGCGT-----CAGAACA--AAAGCCCCAAGATTAAATGTATATTTTTGCTTCCTAACATACTCAGTACAATTTCAGCATGAAGGTCAAAAG---TCAAGAACTGATTTTCTCTTCCA--CCACAGGAGAATATTATCACACTTATAATTAATTCAACTAGTATTT-----CTAAGAGCCTCTAAAATTTacacacacacacacatacacacatgaacgcatgtgcatgtatacacaaacacacacacacacacacacacactcacacacactcatacacacGCCCTTCAGCAAAGTACCCCATGCCTTCTAAGGAAATCCAAGATTAAGACTAGAGTCTCTCTCCAGA--------CAAGACCTACTTTAATCCTAGGTATACAAATATAGAACTGACGTCATGATTACAATAGCAATGCCAATGTGGAGACCTGTGAAGGG-TTCTGTAGCTCTTCATGAGAAAGCTCAAGTTCTCTTTCAAAGACAGAAAGAGAGAC------GTGGCTGTCTTGGAAAAGT-------TGTatacacccccccacgctcacacac------------------------atgcacacatt-------------atgagcacacagacacacccccgcacacccatgcacgcacTAGCCCTTTGGGAAAATAGCCTGACATAATTAACAAGATTAAAGA-GGACTTAGGATAAATAAGATGAGAA--AGCCTGATCCTTACAGGATTAAACCCCAAATCCTAGCATGAATCCAGTGA--TTTCTAAGATCAACACCATGTAACAGGATTAAATCAATAGCTACTTTTGTTTTTACAATGGAAACAATCACAGTTGGCAAATTCA-GGCCTACTGCATCTCCTCCTGTGTTA---ACTAGGG------GGACTGA------GGGCTTCTGCTGTGATGAGGCCTGCTAATGAGCATACTT--CAGGGTCCAAAACCCTTTCTCCTTATTTCCAA-ACTCCAAAAGTCTAGAAAA--AAGTTTCTTTTT----CATTCTTCTC-----TTCCACTTTTG-----------------T----------G---------------------AGAT-----------GGATTCATTCAACAACAAATGTGAGATGAACCAACTCAGACAT i mm10.chr15 C 0 I 192 s canFam3.chr10 40954720 1292 - 69331447 ACCAGGCTATTT-TTCCCCACGACATAAAACCATCATGTTCTAGCAGCTGAAGGACTCTACATTAGGTATTC-------------------------------------------------------------------------------------------------------------------------------------------------------------C--------AA-----TTAT-----------------TAGTTAAAAA-AACAAGAACCACCACCACCCAACAACTAGAGGAAGAAAAGTAATTATGTGGGGCTATAAGAG----AAATCATTTGGTATAGGTTTACTGGTTCCTGAATCCATCAGTAAAACTTTTGGTCCAATTACAAAACTTCCCAC-CCTAATAGCAGAAATAAGAAAAA-AAAATCTTATGGTTAGCTAAGATCTATCATTTTTATTGCTTGGAGAGGACAGTCATTGACAATTATCCTTTAAGGGAAAGAAGGGAAGAA------------ACAG--CACAAGATCCATAGCAGTTATGTTCTGTTAAGT------GGAAGCAAAGAGATCCAAGACGAAACATGTATTTTCTTTTCCTAAGGCACACAGCACAATTTCAATGTGAAGGTCAAAAGGTAATAAGAACTGATTTTCTGTTCTAGTATATAGAAGAGTGGCATCTCAATTATAATCAATTTAACTA-TATTTTTTGACTAAGAGCCTCTAA---------------------------------------------------------------------------ACTCAAATG-------ATATTCCCATTTTAGAAGAGTGCCACATGCCTTCCTGAGAAATCCAAGACAAGCACTAGATTCCCTCTCAGGAGGCCTTGCAGAGACTTACTTTAATCTTGGGTATAAGAATACAGAACTGGTGTTATCCTTGCAATACTAATGCTACTCTGGAGAAGTACACATGGACTCTACAGCTCTTTGTGAGAAAACTGATCTTCATTTTCAGAGACAG------AGAA----AGATACCT---TTGGAAAAGCAACTATATGAATACATCC---------Tacacac------------------------acacacacacacac----------acacacacacaca----------cacacacacacaAACCCTGACCCCTGG-GAAAGCAGTCTGGCATAATTAACAAGATTAAAGAGGGATTTAGGATAAGTAAGATGAAAGTC----TGATCCTTACAGGATTAAACCTCAAATCCTAATATGAATCCAACGA--TTTTTAAGATCAACACCATATAACAGGATTAAACCAATAGCCGCTTTTGTTTTCATACTGGAAACAATCGCAGTTGGCAAATCCAGGGCCTCCAGCACCACCTCAGTAGTTAAACAGTGTGGAGTTCAGGGCTAAAAATA-GGGCCCTTACTCCAACTCCGCTTGCTGACTGCCCTATTTCCAGaggtccagaatcccttatgtgtaattccaaagcccaaaaagctcgaaaaacTACCTTTCTCTCTTA--------CTTCCCTTCCC--------A-----TCA---------GTTTTTTG-TGC---------------------TGGTGGAAGAG----AGGTTCATTTGGTGATAAA-ATGGGACAA-------------- i canFam3.chr10 I 127 C 0 a score=386005.000000 s hg38.chr22_KI270876v1_alt 186654 117 + 263666 AACAATATTATGgtgtgaatattcaaaaacatttagctgcaa----atagatgagtatgattaca----cagtgttgcctcttacccaaatactggtggtt--agcctaatatagggtacatgtatt s panTro4.chr22 34565316 117 + 49737984 AACAATATTATGgtgtgaatattcaaaaacatttagctgcaa----atagatgagtatgattaca----cagtgttgcctcttacccaaatactggtggtt--agcctaatatagggtacatgtatt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30978697 117 + 46535552 AACAATATTATGgtgtgaatattcaaaaacatttagctgcaa----ataggtgagtatgattaca----cagtgttgcctcttacccaaatactggtggtt--agcctaatatagggtacatgtatt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100536294 117 - 115148730 AACAATATTATGgtgtgaatattcaaaaacatttagctgcaa----atagatgagtatgattaca----cagtgttgcctcttacccaaatactggtggtt--agcctaatatacggtacatgtatt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80682886 117 + 95678458 AATGATATTATGgtgtgaatattcacaaacatttagctgcaa----atagatgagtatgattaca----cagtgttgcctcttacccaaatactggtggtt--agcctaatatagggtgcatgtatt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81108927 117 - 96509753 aatgatattatggtgtgaatattcacaaacatttagctgcaa----atagatgagtatgattaca----cagtgttgcctcttacccaaatactggtggtt--agcctaatatagggtgcatgtatt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76366380 117 + 90941950 AATGATATTATGGTGTGACTATTCACAAACATTTAGCTGCAA----ATAGATGAGTATGATTACA----CAGTGTTGCCTCTTACCCAAATACTGGTGGTT--AGCCTAATATAGGGTGCATGTATT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18634251 121 + 33263144 AATGATATTATGgtgtgaatattcaaaaacatttagctgcaa----atagatgagtatgattacacagccagtattgcctcttacccaaatactggtggtt--agcctaatatagggtgcatgtatt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198337630 117 + 210400635 AAGGATATTATGAtgtgaatattcaaaaacatttagctgcaa----atagataaatatgattaaa----tggtgtgacctcttacccaaatactggtggtt--agcctaatataggatacatgtgtg i calJac3.chr1 C 0 C 0 s canFam3.chr10 40956012 114 - 69331447 CACCATact-tggtgtaagtatgcaaaaacattgagctgcaaatgtatgaatgaatgtgattacc----aggtgttgcc-cacagccaactagggatgtatacacccta-------gtgtatgtact i canFam3.chr10 C 0 C 0 e mm10.chr15 77174861 192 + 104043685 I a score=369395.000000 s hg38.chr22_KI270876v1_alt 186771 135 + 263666 gcatattctttcta-------------------aaacccaaaagatt--ccaaatgataatacatatctggcttccagagtttc-agata--aaggactgtTGTGTTGTTCTTTA---------------GCT--------AAAAAAAAGGCAGCTATGCCATGAATAACAGCAAATCAAGG s panTro4.chr22 34565433 135 + 49737984 gcatattctttcta-------------------aaacccaaaagatt--ccaaatgataatacatatctggcttccagagtttc-agata--aaggactgtTGTGTTGTTCTTTA---------------GCT--------AAAAAAAAGGCAGCTATGCCATGAATAACAGCAAATCAAGG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30978814 134 + 46535552 gcatattctttcta-------------------aaacccaaaagatt--ccaaatgataatacatatctggcttcaagagtttc-agata--aaggactgtTGTGTTGTTCTTTA---------------GCT---------AAAAAAAGGCAGCTATGCCATGAATAACAGCACATCAAGG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100536411 134 - 115148730 gcatattctttcta-------------------aaacccaaaagatt--ccaaatgataatacatatctggcttcaagagtttc-agata--aaggactgtTGCGTTGTTCTTTA---------------GCT---------AAAAAAAGGCAGCTATGCCATGAATAACAGCAAATCAAGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80683003 157 + 95678458 gcatattctttctg-------------------aaacccagaagatt--ccaaatgataatacatatctggctttaacagtttc-agata--aaggactgtTGTGTTGTTCTTTAACACATGGCATGGCTGCTAAAAAAAAAAAAAAAAGGCAGCCATGCCATGAATAATAGCA-ATCAAGG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81109044 155 - 96509753 gcatattctttctg-------------------aaacccagaagatt--ccaaatgataatacatatctggctttaacagtttc-agata--aaggactgtTGTGTTGTTCTTTAACACACGGCATGGCTGCT--AAAAAAAAAAAAAGGGCAGCCATGCCATGAATAATAGCA-ATCAAGG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76366497 152 + 90941950 GCATATTCTTTCTG-------------------AAACCCAGAAGATT--CCAAATGATAATACATATCTGGCTTTAACAGTTTC-AGATA--AAGGACTGTTGTGTTGTTCTTTAACACATGGCAtggctgct-----aaaaaaaaaaaggcagccatGCCATGAATAATAGca-atcaagg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18634372 154 + 33263144 gcatattctttctg-------------------aaacccagaagatt--ccaaatgataatacatatctggctttaagagtttc-agata--aaggactgtTGTGTTGTTCTTTAACACATGGCATGGCTGCT---AAAAAAAACAAAAGGCAGCTATGCCATGAATAATAGCA-ATCAAGG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198337747 123 + 210400635 gcacattctttcta-------------------aaatcc--aagatt--ccaaattataatacatacctggctgcaagagtttc-agata--aagaactg----------CTTTA---------------GCT--------AAAAAAAAGGCAGCCATGCCATGAATAATGGCAAAATAGGG i calJac3.chr1 C 0 C 0 s mm10.chr15 77175053 145 + 104043685 gcaggttccctctatgtagaccaggctgtccttgaactcacaaagat--ccatccatctgcttacctctgcc--------tctc-aagtactgagGACTGGCTCtttgtttttaa--------------------------gagacaaggtctgtcttgctagggctaaccctaactcttgg i mm10.chr15 I 192 I 231 s canFam3.chr10 40956126 121 - 69331447 ggctttcctttcca-------------------aaCTATAAAATACTCCCCCAGTTATGATATA------------ATAATATCGGGAAA--AAAGACTGTAGT-TCGTTCCTTA---------------GCT------------TAAAAGTAACCATGACATGAATAACGGCCAACCAGGA i canFam3.chr10 C 0 C 0 a score=656891.000000 s hg38.chr22_KI270876v1_alt 186906 187 + 263666 AAAAAAATTAAAATTGTTAACA--CAATAAGCAACAACATGCCAAATAT-TGGCTATCACACTGTAGCCAGTGTGTCTAAGATGGATATGCACTGGGGATAAATTAG--AAGACACAGAGATCCAGCTGGAACTACATATGCTACAGATTGATAATTACATTTTAATAACTAGAAAAATAGTATATTTTAAG s panTro4.chr22 34565568 187 + 49737984 AAAAAAATTAAAATTGTTAACA--CAATAAGCAACAACATGCCAAATAT-TGGCTATCACACTGTAGCCAGTGTGTCTAAGATGGATATGCACTGGGGATAAATTAG--AAGACACAGAGATCCAGCTGGAACTACATATGCTACAGATTGATAATTACATTTTAATAACTAGAAAAATAGTATACTTTAAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30978948 187 + 46535552 AAAAAAATTAAAACTGTTAATA--CAATAAGCAACAACATGCCAAATAT-TGGCTATCAAACTGTAGCCAGTGTGTCTAAGACGGATATGCACTGGGGATAAATTAG--AAGACACAGAGATCCAGCTGGAACTACATATGCTACAGATTGATAATTACATTTTAATAACTAGAAAAATAGTATattttaag i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100536545 187 - 115148730 AAAAATATTAAAACTGTTAACA--CAATAAGCAACAACATGCCAAATAA-TGGCTATCAAACTGTAGCCAGTGTGTCTAAGATGAATATGCACTGGGGATAAATTAG--AAGACACAGAGATCCAGCTGGAACTACATATGCTACAGATTGATAATTACATTTTAATAGCTAGAAAAATAGTATATTTTAAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80683160 187 + 95678458 AAAAAAATTAAAACTGTTAACA--CAATAAGCAACAACATGCCAAATAA-TGGCTATCAAACTGTAGCCAGTGTGTCTGAGATGGATATGCACTGGGGATAAATTAG--AAGAGACAGAGATCCAGCTGGAACTACATATGCTACAGATTGATAATTATATTTTAATAACTAGAAAAATAGTATACTTTAAG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81109199 187 - 96509753 AAAAAAATTAAAACTGTTAACA--CAATAAGCAACAACATGCCAAATAA-TGGCTATCAAACTGTAGCCAGTGTGTCTGAGATGGATATGCACTGGGGATAAATTAG--AAGAGACAGAGATCCAGCTGGAACTACATATGCTACAGATTGATAATTATATTTTAATAACTAGAAAAATAGTATACTTTAAG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76366649 183 + 90941950 aaaaaaattaaaactgttaaCA--CAATAAGCAACAACATGCCAAATAA-TGGCTATCAAACTGTAGCCAGTGTGTCTGAGATGGATATGCACTGGGGATAAATTAG--AAGAGACAGAGATCCAGCTGGAACTACATATGCTaca----gataattatattttaataactagAAAAATAGTATACTTTAAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18634526 187 + 33263144 AAAAAAATTAAAACTGTTAACA--CAATAAGCAACAACATGCCAAATAA-TGGCTATCAAACTGTAGCCAGTGTGTCTGAGATGGATATGCACTGGGGATAAATTAG--AAGAGACAGAGATCCAGCTGGAACTACATATGCTACAGATTGATAATTATATTTTAATAACTAGAAAAATAGTATACTTTAAG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198337870 187 + 210400635 AAAAAAATTAAAACTGTTAACA--CAATAAGCAACAACATGACAAATAA-TGGCTATGAAACTGTAGCCAGTGTGTCTAAGATGGGTATGCACTGGGGATAAAACAG--AAGAGACAGAGATCCAGCTGGAACTATATATGCTACAGATTGATAATTACATCTTAATAACTAGAAAAAGAGTATATTTTAAG i calJac3.chr1 C 0 C 0 s canFam3.chr10 40956247 184 - 69331447 AAACAGATTTAAATTGCTGACATTTTACATGCAACAACATGTAAAATAATTAACTAGCAAACTGCAGCCAGTATGTTGTGGATGGACATGCACTGGGGATAAATTAGGAGAGAGAGAGAGACCCAGCTGGAACCATGTATGTT-CAGACTATTAA-TGCATTTTA------AGAATGGCAGCATATTTTAAG i canFam3.chr10 C 0 C 0 e mm10.chr15 77175198 231 + 104043685 I a score=441838.000000 s hg38.chr22_KI270876v1_alt 187093 144 + 263666 TAAAATT----------TCTCAAAAGGTTGG-TTTAGGGGTAAGCTTTTAAAACCTGCCATCAATCAAAAGCAAACAATAACAAAAGACTTTTGGGGGTATACCAGAAAAGACAACGTGAA-GGTTTATTCAAACTGCATAATT---AAATATGTATTT s panTro4.chr22 34565755 144 + 49737984 TAAAATT----------TCTCAAAAGGTTAG-TTTAGGGGTAAGCTTTTAAAACCTGCCATCAATCAAAAGCAAACAATAACAAAAGACTTTTGGGGGTATACCAGAAAAGACAACGTGAA-GGTTTATTCAAACTGCATAATT---AAATATGTATTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30979135 154 + 46535552 taaaattttaagtaaaatttCTCAAGGTTGG-TTTAGGGGTAAGCTTTTAAAACCTGCCATCAATCAAAAGCAAACAATAACAAAAGACTTTTGGGGGTATACCAGAAAAGACAACATGAA-GGTTTATTCAAACTGCATAATT---AAATATGTATTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100536732 144 - 115148730 TAAAATT----------TCTCCAAAGGTTGG-TTTAGGGGTAAGCTTTTAAAACCTGCCATCAGTCAAAAGCAAACAATAACAAAAGACTTTTGGGGGTATATCAGAAAAGACAACATGAA-GGTTTATTCAAACTGCATAATT---AAATATGTATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80683347 144 + 95678458 TAAAATT----------TCTCAAAAGGTTGG-TTTAGGGGTAAGTTTTTAAAACCAGCCATCAATCAAAAGCAAACAATAACAAAAGACTTTTGGGGGTATACCAGAAAAGACAACATGAA-GGTTTATTTGAACTGCATAATT---AAATATGTATTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81109386 144 - 96509753 TAAAATT----------TCTCAAAAGGTTGG-TTTAGGGGTAAGTTTTTAAAACCAGCCATCAATCAAAAGCAAACAATAACAAAAGACTTTTGGGGGTATACCAGAAAAGACAACATGAA-GGTTTATTTGAACTGCATAATT---AAATATGTATTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76366832 144 + 90941950 CAAAATT----------TCTCAAAAGGTTGG-TTTAGGGGTAAGTTTTTAAAACCAGCCATCAATCAAaagcaaacaataacaaaagactTTTGGGGGTATACCAGAAAAGACAACATGAA-GGTTTATTTGAACTGcataatt---aaatatgtattt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18634713 144 + 33263144 TAAAATT----------TCTCAAAAGGTTGG-TTTAGGGGTAAGTTTTTAAAACCAGCCATCAATCAAAAGCAAACAATAACAAAAGACTTTTGGGGGTATACCAGAAAAGACAACATGAA-GGTTTATTTGAACTGCATAATT---GAATATGTATTT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198338057 144 + 210400635 TAAAATT----------TCTAAAAAGGTTGG-TTTAGGGCTAGGTTTTTAAAACCTGCCATCAATCAAAAGCAAACAACAACAAAAGACTTGTGGGAGTATACCAGAAAAGACCACATGAA-GGTTTATTCAAACGGCATAATT---AAATATGTATTT i calJac3.chr1 C 0 C 0 s mm10.chr15 77175429 140 + 104043685 TAAAAAC----------ACTC--AAGTTTGGATGGAGACTTAAGTTTTTGAAACTTGCTG-CAATCAAAATCGAAC---AACCAAAGCTTTTGTAGAATATACCAGGAAAGGTACTATGACTGGTTTGATGA---TGCGTAAGCAGAAAATAGGTATTT i mm10.chr15 I 231 C 0 s canFam3.chr10 40956431 44 - 69331447 GAAGATT----------TCTCAAAAGTGTGA-CTTAGGGTTAAGT----------------------------GACAGTA---------TTT------------------------------------------------------------------- i canFam3.chr10 C 0 C 0 a score=317509.000000 s hg38.chr22_KI270876v1_alt 187237 148 + 263666 CCTAAATACCTTTGTAGTCTTATGATTCTTAGAATTTTAATTCCTAAAATAAACACAGAAAGGCAATTTGGAACATAATATATACGCCAT------TTTTTTGAAAGTGCATA--CATTAAT----TTTCAAACTC--atttatatttat-----taatttcaaaca------ s panTro4.chr22 34565899 148 + 49737984 CCTAAATACCTTTGTAGTCTTATGATTCTTAGAATTTTAATTCCTAAAATAAACACAGAAAGGCAATTTGGAACATAATATATACGCCAT------TTTTTTGAAAGTGCATA--AATTAAT----TTTCAAACTC--ACTTATATTTAT-----TAATTTCAAACA------ i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30979289 152 + 46535552 CCTAAATACCTTTGTAGTCTTATGATTCTTAGAATTTTAATTCCTAAAATAAACACAGAAAGGCAATTTGGAAGATAATATATACACCAT------TTTTTTCAAAATGCGTATCAATTAAT----TTTCAAACTCATATTTATATTTAT-----TAATTTCAAACA------ i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100536876 151 - 115148730 CCTAAATACCTTTGTAGTCTTATGATTCTTAGAATTTTATTTCCTAAAATAAACACAGAAAGGCAATTTGGAACATAATATATATGTCA-------TTTTTTGAAAATTCATATCAattaat----tttcaaactcatatttatatttat-----taatttcaaaca------ i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80683491 139 + 95678458 CCTAAATACCTTTGTAGTCTTATGATTCTTAGAATTTT---------AATAAGCACAGAAAGGCAACTTGGAAA--AATATATATGCCAT-----ATTTTTTGAAAATTCGTATCAATTAAT----TTTCAAACTC------ATATTTAT-----TAATTTCAAACA---TTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81109530 139 - 96509753 CCTAAATACCTTTGTAGTCTTATGATTCTTAGAATTTT---------AATAAGCACAGAAAGGCAACTTGGAAA--AATATATATGCCAT-----ATTTTTTGAAAATTCGTATCAATTAAT----TTTCAAACTC------Atatttat-----taatttcaaaca---ttt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76366976 139 + 90941950 cctaaATACCTTTGTAGTCTTACGATTCTTAGAATTTT---------AATAAACACAGAAAGGCAACTTGGAAc--aatatatatgccat-----attttttgaaaattcttgtcaattaat----tttcaaactc------atatttat-----taatttcaaaca---ttt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18634857 139 + 33263144 CCTAAATACCTTTGTAGTCTTATGATTCTTACAATTTT---------AATAAACACAGAAAGGCAACTTGGAAC--AATATATATGCCAT-----ATTTTTTGAAAATTCATATCAATTAAT----TTTCAAACTC------Atatttat-----taatttcaaaca---ttt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198338201 148 + 210400635 CCTAACCGCCTCTGTAGTCTTACGAGTCTTAGAATTTCAATTCCTAAAATAAACATAGAATGGCAATTTGAAACATAATATATATCCCAT------TTGTTTTGGAAAACATA----TCAAT----TTTCAAACTC------ATATTTGTATTCATAATTTCTAACA-----C i calJac3.chr1 C 0 C 0 s mm10.chr15 77175569 121 + 104043685 GCTAATTA-------GGTGTGATTTTTTTCAGTATGTG----------------------------------------TTTGTGTTCCCTTTATTTCTTTTAGAACATTTGTGTCAATAAGTTGGCTTCTGTATTCATCTATTTATGAGT-----TAATTTCAAATACCATTT i mm10.chr15 C 0 C 0 e canFam3.chr10 40956475 0 - 69331447 C a score=1388299.000000 s hg38.chr22_KI270876v1_alt 187385 431 + 263666 atttatcttggaatatttatatttatGC---ATTAATTTACACACATGCATCTCTTTGATAGACATACTATTATTTAATTAACATaaaacaaaactacagacttctgcttccaggaagatggaatacacatacttttccctat-------------------------------------------------------------------ccctcccactaagtacaatttaaaaccctagacatttcatatat---taaac--ataagatgactc--ctcaaaggttgaaagaagcaagaaaacta---------------ga---------cagg----gtggtgagttccttgggttttcttcttgcctcatgtagcccagacttgcaactaaaggacccagaaacaccaacaggcactgac------aaaaaaaagcccccagtgaaaggctcctctcagc---caaagaacaagaaaaggggtggcctagcaagacagaaaacatgcaggctgccttaatccagccaaa---taccacttcac s panTro4.chr22 34566047 431 + 49737984 ATTTATCTTGGAATATTTATATTTATGC---ATTAATTTACACACATGCATCTCTTTGATAGACATACTATTATTTAATTAACATaaaacaaaactacagacttctgcttccaggaagatggaatacacatacttttccctat-------------------------------------------------------------------ccctcccactaagtacaatttaaaaccctagacatttcatatat---taaac--ataagatgactc--ctcaaaggttgaaagaagcaagaaaacta---------------ga---------caag----gtggtgagttccttgggttttcttcttgcctcatgtagcccagacttgcaactaaaggacccagaaacaccaacaggcactgac------aaaaaaaagcccccagtgaaaggctcctctcagc---caaagaacaagaaaaggggcggcctagcaagacagaaaacatgcaggctgccttaatccagccaaa---taccacttcac i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30979441 431 + 46535552 ACTTATCTTGGAATATTTATATTTATGC---GTTAATTTACACACATGCATCTCTTTGACAGACATACTATTATTTAATTAACATaaaacaaaactacagacttctgcttccaagaagatggagtacacatacttttccctat-------------------------------------------------------------------ccctcccactaagtacaatttaaaaccctagacatttcatatat---taaac--ataagatgactc--ctcaaaggttgaaagaagcaagaaaacta---------------ga---------cagg----gtggtgagttccttgggttttcttcttgcctcatgcagcccagacttgcagctaaacgacccagaaacaccaataggcactgac------aaaaaaaagcccccagtgaaaggctcctctcagc---caaagaacaagaaaaggggcggcctagcaagacagaaaacatgcaggctgccttaatccagccaaa---taccacttcac i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100537027 430 - 115148730 atttatcttggaatatttatatttatGC---ATTAATTTACACACATGCATCTCTTTGACAGACATACTATTATTTAATTAACATaaaacaaaactacagacttctgcttccaggaagatggagtacacacaattttccctat-------------------------------------------------------------------ccctcccactaagtacaatttaaaaccctagacatttcatatat---taaac--ataagatgactc--ctcaaaggttgaaagaagcaagaaaacta---------------ga---------cagg----gtggtgagttccttgggttttctttttgcctcatatagcccagacttgcagctaaaggacctggaaacaccaacaggcactgac-------taaaaaagcccccattgaaaggctcttctcagg---caaagaacaagaaaaggggcagcccaccaagacagaaaacatgtaggctgccttaatccagccaaa---taccacttcac i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80683630 412 + 95678458 ATTTATCTTGGAATATTTATATTTATGCATTATTAATCTACACACATGCATCTCATTGACAGACAT---------------------------ACTACagacttctgcttccaggaagatggagtacacatacttttccctat-------------------------------------------------------------------ccctcccactaagtacagtttaaaaccctagacatttcatatat---taaac--ataagatgactc--ctcaaaggttgaaagaagcaagaaaacta---------------ga---------cagg----gtggtgagtttcttgggttttctttttgcctcatatagcccagacttgcatctaaaggacctagaaacaccagtaggcactgac-aaaaaaaaaaaaagcccccaatgaatggcttctctcagc---taaagaacaagaaaaggggcagcctagcaagacagaaaacatgtaggctgccttaatgcagccaaa---cgccacttcac i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81109669 410 - 96509753 atttatcttggaatatttatatttatgcattattaatctaCACACATGCATCTCATTGACAGACAT---------------------------ACTACagacttctgcttccaggaagatggagtacacatacttttccctat-------------------------------------------------------------------ccctcccactaagtacagtttaaaaccctagacatttcatatat---taaac--ataagatgactc--ctcaaaggttgaaagaagcaagaaaacta---------------ga---------cagg----gtggtgagtttcttgggttttctttttgcctcatatagcccagacttgcatctaaaggacctagaaacaccagtaggcactgac---aaaaaaaaaaagcccccaatgaatggcttctctcagc---taaagaacaagaaaaggggcagcctagcaagacagaaaacatgtaggctgccttaatgcagccaaa---cgccacttcac i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76367115 410 + 90941950 atttatcttggaatatttatatttatgc---attaatttaCACACATGCATCTCATTGACAGGCAT---------------------------ACTACAGACTTCTGCTTCCAGGAAGATGGAGTACACATACTTTTCCCTAT-------------------------------------------------------------------CCCTCCCACTAAGTACAGTTTAAAACCCTAGACATTTCATATAT---TAAAC--ATAAGATGACTC--CTCAAAGGttgaaagaagcaagaaaactA---------------GA---------CAGG----GTGGTGAGttccttgggttttctttttgcctcatataGCCCAGACTTGCATCTAAAGGACCTAGAAACACCAATAGgcactgacaaaaaaaaaaaaaagcccgcaATGAATGGCTTCTCTCAGc---taaagaacaagaaaaggggcagcctagcaagacagaaaacatGTAGGCTGCCTTAATACAGCCAAA---CGCCACTTCAC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18634996 401 + 33263144 atttatcttggaatatttatatttatgc---attaatttatACACATGCATCTCATTGACAGACAT---------------------------ACTACagacttctgcttccaggaagatggagtacacatacttttccctat-------------------------------------------------------------------ccctctcactaagcacagtttaaaaccctagacatttcatatat---taaac--ataagatgactc--ctcaaaggttgaaagaagcaagaaaacta---------------ga---------cagg----gtggtgagttccttgggttttctttttgcctcatat---------ttgcctctaaaggacctagaaacaccaataggcattgacaaaaaaaaaaaaaagcccccaatgaatggcttctctcagc---taaagaacaagaaaaggggcagcctagcaagacagaaaacatgtaggctgccttaatgcagccaaa---cgccacttcac i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198338349 420 + 210400635 ATTTA-CTTGGAGTATTTATATTTATGC---ATTAATTCACACA----TTTCTCTTTGACAGACATACTACTATTCAATTaacataaa-----actatagacttgtgcttccaggaagatggaatacacatacttttccctat-------------------------------------------------------------------tcctcccactaagtacagtttaaacctctagacatttcatatat---taaac--ataagatgactc--ctcaaaggctgaaagaagacagaaaacta---------------ga---------cagg----gtggtgagttccttgggttttctttttgcctcatatatcccagacttgcagcgaaaggacctggaaacaccaacagggactaac-------taaaaaagcccccagtgaaaggctcctctcaac---caaagaacaagaaaaggggcagcctagcaagacagaaaacatgtaggctgctttaatccagtcaaa---cgccacctcac i calJac3.chr1 C 0 C 0 s mm10.chr15 77175690 452 + 104043685 ATTTCTCTTGGAATATCTGCAT---------GTTAACTTGTGTGTAT--TTCTGTTTTGCAG---------TATTCAATTAGCAAAGAAA---ACTACTGATTTCTGTTTCCAGGAAGAAGGTGCATCCACAGTTTTTACtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtAAGTAAAATAAGACAAAACCTACCATTAAGA------TATAACCATTAATGTGGC-TACATCTCTAGCC--ACa----gactc--ttc-aaggtagagatgaggaagcgaactaagtagtgttcctctgga---------cagt----gtggtgagtcctctgactttccttg-----tcttgtaaccagacctggcagctcaagcactcagaaagaccagtgggcacacac-------aaagaGTGTT-----------GCCTTTCT------------AACCAAAAGAAGGG--------CAATACACAAAGCACTGAGACT-CTGAAATCCTGCCAAACTGCACCACCTAAC i mm10.chr15 C 0 I 1763 s canFam3.chr10 40956475 432 - 69331447 ACTTCTCTTGGAACATTTATATTTATAC---ATTAATTTACACAAAT--TTCTCTTTGACAGAAAACCTA----TCAATTAACATAAAATAA-ACTACTggcttctgcttctggaaagaaggattacatatactttcccccat-------------------------------------------------------------------ttcaccca---------acttaaagtcctagacatctgacatat---taaacaaatataaagactccacttacaggt--aaagaagaaagcaacctg---------------gagtgggacctcaggacatgtggtgagctccctgggttttctctttgcctcatggagcctggaa--gctcccacagaacctggaagcaccaatgggcacaaac-----aaacaaaaaggacccaagggaagcctcttctctgcaatcaaaggacaagggaaggggaagcccagcgagacagaaaatttttagactgctctaatccagccaaa---cccaaccttgg i canFam3.chr10 C 0 C 0 a score=415697.000000 s hg38.chr22_KI270876v1_alt 187816 127 + 263666 tcccactcacg--ccaggaaaggccaagtgaggagccttcac----ttctaccctggccaggctctaaccaggagtctcaacatccccatccaagaaatatca------cagaattagagagccCT----TGGAGCCCTACAG s panTro4.chr22 34566478 127 + 49737984 tcccactcacg--ccaggaaaggccaagtgaggagccttcac----ttctaccctggccaggctctaaccaggagtctcaacatccccatccaagaaatatca------cagaattagagagccCT----TGGAGCCCTACAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30979872 127 + 46535552 tcccactcacg--ccaggaaaggccaagtgaggagccttcac----ttctaccctggccaggctctaaccaggagtctcaacatccctgtccaagaaatatca------cagaattagagagccCT----TGGAGCCCTACAG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100537457 127 - 115148730 tctcactcaca--ccaggaaaggccaagtgaggagccttcac----ttctaccctggccaggctctaaccaggagtctcaacatccctgtccaagaaatatca------cagaaTTAGAGAGGCCT----TGGAGCCCTACAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80684042 127 + 95678458 ttgcactcatg--ccgggaaaggccaagtggagagccttcac----ttctaccgtggccaggctctaaccaggagtctcaacatccctgtccaagaaatatca------cagaaTTTGAGAGCCCT----TGGAGCCCTACAG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81110079 127 - 96509753 tcgcactcatg--ccgggaaaggccaagtggagagccttcac----ttctaccgtggccaggctctaaccaggagtctcaacatccctgtccaagaaatatca------cagaaTTTGAGAGCCCT----TGGAGCCCTACAG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76367525 127 + 90941950 TCGCACTCACG--CCAGGAAAGGCCAAGTGGAGAGCCTTCAC----TTCTACCGTGGCCAGGCTCTAACCAGGAGTCTCAACATCCCTGTCCAAGAAATATCA------CAGAATTTGAGAGCCCT----TGGAGCCCTACAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18635397 127 + 33263144 tcgcactcatg--ccaggaaaggccacgtggagagccttcaa----ttctaccgtggccaggctctaaccaggagtctcaacatccctgtccaagaaatatca------cagaaTTAGAGAGCCCT----TGGAGCCCTACAG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198338769 131 + 210400635 tctcactcatg--ccagcaaaggccaagtggggagcctttacgtctttctaccctggctaggctctaaccaggagtcttaacacccctgtctaagaaatatta------cagaagtagagagccCT----TGGAGCGCTACAG i calJac3.chr1 C 0 C 0 s canFam3.chr10 40956907 138 - 69331447 tcccacccatgttttagcaaagacctagtagggagcctaaac----ttgtacctt-accaggctattctcaggcatcccaatagctgggcccaagtgacattaggggaggagaaacagggagcccccatgttcacccccacAG i canFam3.chr10 C 0 I 1188 e mm10.chr15 77176142 1763 + 104043685 I a score=211948.000000 s hg38.chr22_KI270876v1_alt 187943 61 + 263666 AATGTGTAACAgtatctacgttcaatgtcttgatt-tcataactgcattgtggttatgtaag s panTro4.chr22 34566605 61 + 49737984 AATGTGTAACAgtatctacgttcaatgtcttgatt-tcataactgcattgtggttatgtaag i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30979999 61 + 46535552 AATGTGTAACAgtatctacgttcagtgtcttgatt-tcataactgcattgtggttatataag i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100537584 61 - 115148730 AATGTGTAACAgtatctatgttcaatgtcttgatt-tcataactgcattgtggttatgtaag i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80684169 61 + 95678458 AATGTGTAACAgtatctatgtccaatgtcttgatt-tcataactgcattgtggttatgtaag i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81110206 61 - 96509753 AATGTGTAACAgtatctatgtccaatgtcttgatt-tcataactgcattgtggttatgtaag i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76367652 61 + 90941950 AATGTGTAACAGTATTTATGTCCAATGTCTTGATT-TCATAACTGCATTGTGGTTATGTAAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18635524 61 + 33263144 AATGTGTAACAgtatctatgtccaatgtcttgatt-tcataactgcattgtggttatgtaag i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198338900 61 + 210400635 AATGTGtaacagtatctgtgtcaaatgtcttgatt-tcataactgcattgtggttatataag i calJac3.chr1 C 0 C 0 s canFam3.chr10 40958233 59 - 69331447 aggagataacagtacctatatgaaatgtcctggttgttttaagtgtactgtggttatgt--- i canFam3.chr10 I 1188 C 0 e mm10.chr15 77176142 1763 + 104043685 I a score=2069719.000000 s hg38.chr22_KI270876v1_alt 188004 593 + 263666 aaaacgcctttattcttagaaaataaatatgaaattatctaagactgaagggattttatatgcacaca------catg--------------cacacacacacacacttaaaacgtactttcaaatggttcagaaaaaa------agagaatagtacagcaaatgtggcaaaatgataaAGAaaagaaccttttaaggttaacagatatattcactacctttcctgtgattgtgtcacaagtagtttgcctatgtcaaaattccatcaaataccacacttga-aacatttgca-TGAATCTAC-AATTATCTCAAA--ACAAA--GTTTAA-TGAAAACAAAATCTACTTGGCACTGAAATCCAGAATAATATGAGTACATCTGCCAGCAGTTTTATATTTTGATGTCACCCAGAATGCCATAAAGTGATGACACCTAATGTTTGTAATGATTATATCATGTATTTCTTCCTTTGGAGTTACCAAATCATTGTATGGGCTTTACAATGTATTCTTTGCGTTTACTAGACACACAATTGCTCACACCATAGGACAAAATCAGTATGCAGAAACCACCTTG---TAATAGCCTTTTTAATTTGTTATTCATGTTTCTTAAATATACTAACTA s panTro4.chr22 34566666 589 + 49737984 aaaacgcctttattcttaga----aaatatgaaattatctaagactgaagggattttatatgcacaca------catg--------------cacacacacacacacttaaaacgtactttcaaatggttcagaaaaaa------agagaatagtacagcaaatgtggcaaaatgataaAGAaaagaaccttttaaggttaacagatatattcactacctttcctgtgattgtgtcacaagtagtttgcctatgtcaaaattccatcaaataccacacttga-aacatttgca-TGAATCTAC-AATTATCTCGAA--ACAAA--GTTTAA-TGAAAACAAAATCTACTTGGCACTGAAATCCAGAATAATATGAGTACATCTGCCAGCAGTTTTATATTTTGATGTCACCCAGAATGCCATAAAGTGATGACGCCTAATGTTTGTAATGATTATATCATGTATTTCTTCCTTTGGAGTTACCAACTCATTGTATGGGCTTTACAATGTATTCTTTGTGTTTACTAGACACACAATTGCTCACACCATAGGACAAAATCAGTATGCAGAAACCACCTTG---TAATAGCCTTTTTAATTTGTTATTCATGTTTCCTAAATATACTAACTA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30980060 593 + 46535552 aaaacgcctttatttttagaaaataaatatgaaattatctaagactgaagggattttatatgcacaca------catg--------------cacacatacatacacttaaaacgtactttcaaatggtttagaaaaaa------agagaatagtacagcaaatgtggcaaaatgataaAGAaaagaaccttttaaggttaacagatatattcactacccttcctgtgattgtgtcacaggtcgtttgcctatgtcaaaattccatcaaataccacacttta-aacatttgca-TGAATCTAC-AATTATCTCAAA--ACAAA--GTTTAA-TGAAAACAAAATCTACTTGGCACTGAAATCCAGAATAATATGAGTACATCTGCCAGCAGTTTTATATTTTGATGTCACCCAGAATGCCATAAAGTGATGACGCCTAATGTTTGTAATGATTATATCATGTATTTCTTCCTTTGGAGTTACCAAATCATTGTATGGGCTTTACAATGTATTATTTGTGTTTACCAGACACACAATTGCTCACACCATAGGACAAAATCAGTATGCAGAAACCACCTTG---TAATAGCCTTTTTAATCTGTTATTCATGTTTCTTAAATATACTAACTA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100537645 598 - 115148730 aaaacgcctttattcttagt----aaatatgaaattatctaagactgaagggattttatacgcacaca------catgcacacacacacacacacacacacacacacttaaaacgtattttcaaatggttcagaaaaaa------agagaatagtacagcaaatgtgggaaaatgataaAGAaaagaatcttttaaggttaacagatatattcactacctttcctgtgactgtgtcacaggtagtttgcctatgtcaaaattccatcaaataccacacttta-aacatttgcC-TGAATCTAC-AATTATCTCAAA--ACAAA--GTTTAA-TGAAAACAAAATCTACTTGGCACTGAAATCCAGAATAATATGAGTACATCTGCCGGCAGTTTTATATTTTGGTGTCACCCAGAATGTCATAAAGTGATGACGCCTAATGTTTGTAATGATTATATCACGTATTTCTTCCTTTGGAGTTACCAAATCATTGTATGGGCTTTAAAATGTATTCTTTGTGTTTACTAGACACACAATTGCTCACACCATAGGACAAAATCAGTATGCAGAAATCGCCTTG---TAATAGCCTTTT-----TGTTATTCATGTTTCTTAAATATACTAACTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80684230 592 + 95678458 aaaacgcctttattcttagaaaagaaatatgaaattatctaagactgaggggattttagacacacatg------caca--------------cacacacacacacacttaaaatgtactttcaaatggttctg-aaaaa------agagaatagtaaagcaaatctggcaaaatgataaAGAAAAATACcttttagggttaactgatatattcattaccttgcctgtgattgtgtcacaggtagtttgcctatgtcaaaactccatcaaataccacacttta-aacatttgca-TGAATCTAC-AATTATCTCAAA--ACAAA--GTTTAA-TGAAAACAAAATCTACTTGGCACTGAAATAAAGAATAATACGAGTACATCTGCCAGCAGTTTTACATTTTGATGTCACCCAGAATGCCAGAAAGTGATGACACCTAATGTTTGTAATGACTATATCATGTATTTCTTCCTTTGGAGTTACCAAATCATTGTATGGGCTTCACAATGTATTCTTTGTGTTTACTAGACACACAACTGCTCACACCATAGGACAAAATCAGTATGCAGAAACCGCCTTG---TAACAGCCTTTTTAATTTGTTATTCATGTTTCTTAAATATACTAACTA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81110267 596 - 96509753 aaaacgcctttattcttagaaaataaatatgaaattatctaagactgaggggattttagacacacatg--cacacaca--------------cacacacacacacacttaaaatgtactttcaaatggttctg-aaaaa------agagaatagtaaagcaaatctggcaaaatgataaAGAAAAATACcttttagggttaactgatatattcattaccttgcctgtgattgtgtcacaggtagtttgcctatgtcaaaactccatcaaataccacacttta-aacatttgca-TGAATCTAC-AATTATCTCAAA--ACAAA--GTTTAA-TGAAAACAAAATCTACTTGGCACTGAAATCAAGAATAATACGAGTACATCTGCCAGCAGTTTTACATTTTGATGTCACCCAGAATGCCAGAAAGTGATGACACCTAATGTTTGTAATGACTATATCATGTATTTCTTCCTTTGGAGTTACCAAATCATTGTATGGGCTTCACAATGTATTCTTTGTGTTTACTAGACACACAACTGCTCACACCATAGGACAAAATCAGTATGCAGAAACCGCCTTG---TAACAGCCTTTTTAATTTGTTATTCATGTTTCTTAAATATACTAACTA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76367713 598 + 90941950 AAAATGCctttattcttagaaaataaatatgaaattatctAAGACTGAGGGGATTttagacacacatgcacacacaca--------------cacacacacacacacttaaaatgTACTTTCAAATGGTTCTG-AAAAA------AGAGAATAGTAAAGCAAATCTGgcaaaatgataaagaaaaataccttTTAGGGTTAACTGATATATTCATTACCTTGCCTGTGATTGTGCCACAGGTAGTTTGCCTATGTCAAAACTCCATCAAATACCACACTTTA-AACATTTGca-tgaatctac-aattatctcaaa--acaaa--gtttaa-tgaaaacaaaatctactTGGCACTGAAATCAAGAATAATACGAGTACATCTGCCagcagttttacattttgatgtcaCCCAGAATGCCAGAAAGTGATGACACCTAATGTTTGTAATGATTATATCATGTATTTCTTCCTTTGGAGTTACCAAATCATTGTATGGGCTTCACAATGTATTCTTTGTGTTTACTAGACACACAACTGCTCACACCATAGGACAAAATCAGTATGCAGAAACCGCCTTG---TAACAGcctttttaatttgttattcaTGTTTCTTAAATATACTAACTA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18635585 592 + 33263144 aaaacgcctttattcttagaaaataaatatgaaattatctaagactgaggggattttagacacacaca------caca--------------cacacacacacacacttaaaatgtactttcaaatggttctg-aaaaa------agagaatagtagagcaaatctggcaaaatgataaAGAAAAATACcttttagggttaactgatatattcattaccttgcctgtgattgtgtcacaggtagtttgcctatgtcaaaactccatcaaataccacacttta-aacatttgca-TGAATCTAC-AATTATCTCAAA--ACAAA--GTTTAA-TGAAAACAAAATCTACTTGGCACTGAAATCAAGAATAATACGAGTACATCTGCCAGCAGTTTTACATTTTGATGTCACCCAGAATACCAGAAAGTAATGACACCTAATGTTTGCAATGATTATATCATGTATTTCTTCCTTTGGAGTTACCAAATCATTGTATGGGCTTCACAATGTATTCTTTGTGTTTACTAGACACACAACTGCTCACACCATAGGACAAAATCAGTATGCAGAAACCGCCTTG---TAATAGCCTTTTTAATTTGTTATTCATGTTTCTTAAATATACTAACTA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198338961 584 + 210400635 aaaacaccttcattcttagaaaataaatatgaaattatctaagactgaagggattt-------acaca------cact--------------ctctctctcgctctctgaaaatgtactttcaaatggttcaggaaaaa------agagaatagtaaagcaaatgtggcaaaatgataaGaaaaaaagccttttaaggttaacagatatattcattaccttgcctatgagtatgtcacaggt-gtttgcctatgtcaaaactccatcaaataccacgcttta-aacatttgca-TGAATCTAC-AATTATCTCAAA--ACAAA--GTTTAA-TGGAAAAAAACTCTACTTGGCACTGAAATCAAGAATAATCTGAGTACATCTGCCAGCAGTTTTATATTTTGATGTCACCCAGAATGTCATAAAGTGATGATGCCTAATGTTTGTAATTATTATATCATGTATTTCTTCCTTTGGAGTTACCAAATCATTGTAAGGGCTTTATAATGTATTCCTTGTGTTTACTAGACCCACGATTGCTCATATCATAGGACAAAATCAGTATGCAGAAATCACCTCGTAATAATAGCCTTTTTTACTTGTTATTCATGTTTCTTAAATAC----ACTA i calJac3.chr1 C 0 C 0 s mm10.chr15 77177905 495 + 104043685 AGGATGCTTTTGTTTT--------AGATATGGAATTACTGGGAACCTTCAAGATTTTTTACACAGACA------CAAT-----------------------------TTAAAGTTCAGTTTCAGGTAATTTTT-AAAA-----------GATGTTAAAACAA----GACAAAA-GATAAAGAAAA--ACCTTTTATGGTCAATGGATATATTCATAATCTTGAAT---AATGTGTCATAAGT-ATTTACCCTTATCAAACCTCCATC-AACATGATACTTCA-AGCAT--------GGTCAATGGATTATCTAAGT--ATAAAACATTTGA-TAA---------TTATTTAGCATTGAGAGCAAGAATAA---GAGTACACCTGTCTGTACTTTTATGTTTT-ATGTCTCCCAAAACTTCACAAA-----------TGGTCTTTATG---------------ATCTGTTTCTATGGAGCTAACAAAACATTCTATGAAATCTAAATTAGATTCTTTGTGTTCACTGGCTATGCAATTGTGCGAATCGT--------ATCAGTATGCAGATCCCA--------TAACAACCCTTT-GGTTTAGTGCTCATGTTTTTAATATATGTCAAATA i mm10.chr15 I 1763 I 176 s canFam3.chr10 40958292 562 - 69331447 -------------ttttagaaaataagtagg----tattttgggctaaagggacatgatatatgtgta------tgta-------------tcacacacacatatattttaa-tttactctcaaa-ggctcagaaaaaaatacagagagaatagtaaagcaaatgtggcaaaatgataaGGaaaaaaactttt--ggggtgaggaatatattcattacctt------gactgtgtcacaggt-acttacttatgtcaaaatctcatcaaat--ctcactttacaatatgtgtagtGAATCCAT-AGTTATTCCAAAATACAAA--GTTTAATTAAAAAAAAAAACTACTTAGCCCTGAAATACAGAATACTCTAAATATATGTTCCAGCAACTTTATATTTTGATGTCACCCAGAACACTACAAAACAATTATGCCTAATGTTTATGATTATTATACCATGTA----------CAGAATTACCAAAACATTTTATGGCCTTCACAATGTATTCTTTGTGTTTACTAGACACATAGCTGCCCACAAGATAAGACAAAATCAGTATGCAGATACCTCTTCA---CAACAGCCTTTGT-GTTTATTACTCATGTTTCTTAACTACATTAAA-- i canFam3.chr10 C 0 C 0 a score=12592.000000 s hg38.chr22_KI270876v1_alt 188597 4 + 263666 AATA s panTro4.chr22 34567255 4 + 49737984 AATA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30980653 4 + 46535552 AATA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100538243 4 - 115148730 AATG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80684822 4 + 95678458 AATA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81110863 4 - 96509753 AATA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76368311 4 + 90941950 AATA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18636177 4 + 33263144 AATA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198339545 4 + 210400635 AATA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40958854 4 - 69331447 AAGG i canFam3.chr10 C 0 C 0 e mm10.chr15 77178400 176 + 104043685 I a score=549549.000000 s hg38.chr22_KI270876v1_alt 188601 165 + 263666 TTGTTGCTTTGGTAAGGGTTACCAGAACTTAAAGAGATGGGCCCTCTGTAAGTAAGTTTGATTAGCTTTTTAAAATTAGCATTCTTTGAAAACTATTTTATGAAG-AAAAAATTAAGGGCTCCCATCTT-CCATTTGACCATCAG---TTCTACAATTTAAAA-TTTTTTT- s panTro4.chr22 34567259 165 + 49737984 TTGTTGCTTTGGTAAGGGTTACCAGAACTTAAAGAGATGGGCCCTCTGTAAGTAAGTTTGATTAGCTTTTTAAAATTAGCATTCTTTGAAAACTATTTTATGAAG-AAAAAATTAAGGGCTCCCATCTT-CCATTTGACCATCAG---TTCTACaatttaaaa-attttta- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30980657 165 + 46535552 TTGTTGCTTTGGTAAGGGTGACCAGAACTTAAAGAGATGGGCCCTCTGTAAGTAAGTTTGATTCGCTTTTTAAAATTAGCATTCTTTGAAAACTATTTTATGAAG-AAAAAATTAAGGGCTCCCACCTT-CCATTTGACCATCAG---TTCTACAACttaaaa-ttttttt- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100538247 167 - 115148730 CTGTTGCTTTGGTAAGGGTTACCAGAACTTAAAGAGATGGGCCCTCTGTAAGTAAGTTTGATTAGCTTTTTAAAATTAGCATTCTTTGAAAACTATTTTATGAAGAAAAAAATTAAGGGCTCCCACCTT-CCATTTGACCATCAG---TTCTACAATTTAAAAtttttttt- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80684826 166 + 95678458 TTGTTGCTTTGGTAAGGGTTACTAGAACTTAAAGAGATGGGCCCTCTATAAGTAAGTTTGAACGGCTTTTTTAAATTAGCATTATTTGGAAACTATTTTATGAAG-AAAAAATTAAGGGCTCCCACCTT-CCATTTGACCATCAG---ttttatagtttaaaaaatttttt- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81110867 166 - 96509753 TTGTTGCTTTGGTAAGGGTTACTAGAACTTAAAGAGATGGGCCCTCTATAAGTAAGTTTGAACGGCTTTTTTAAATTAGCATTATTTGGAAACTATTTTATGAAG-AAAAAATTAAGGGCTCCCACCTT-CCATTTGACCATCAG---TTTTATAGTTTAAAAAATTTTTT- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76368315 166 + 90941950 TTGTTGCTTTGGTAAGGGTTACTAGAACTTAAAGAGATGGGCCCTCTATAAGTAAGTTtgaacagctttttaaaattagcattatttgaaaactattttatgaag-aaaaaattaagggCTCCCACCTT-CCATTTGACCAtcag---ttttatagtttaaaaaacttttt- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18636181 166 + 33263144 TTGTTGCTTCAGTAAGGGTTACTAGAACTTAAAGAGATGGGCCCTCTATAAGTAAGTTTGATCAGCTTTTTAAAATTAGCATTATTTGAAAACTATTTTATGAAG-AAAAAATTAAGGGCTCCCACCTT-CCATTTGACCATCAG---TTTTATAGTTTAAAAAATTTTTT- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198339549 157 + 210400635 TTGTTGCTTTGGTAAGGGTTACTAGTACTTAAAGAGATGGGCCTGCTACAAATAAATTGGATTAGCTTTTCAAAATTAGCATTCTTTGAAAACTATTTTATGAAG-AAAAAATT-AGGGTTCCCACCTT-CCAGTTGACCATCAG---TTTTACAATTTAATA--------- i calJac3.chr1 C 0 C 0 s mm10.chr15 77178576 158 + 104043685 TTACTACTTTCCTAAGGGCACCTAGAACTCAGGTGGCTTG---CTCCATTGATATGTCTCATTATATTTTT--AATTAAAAGTCTTTGAAAACTATTT--TGAAG-GAAAAAATACAAGT----ATGTTGCCAACTAATCACCAGAACTTCAGAGATTTAAAATATGTCT-- i mm10.chr15 I 176 I 2720 s canFam3.chr10 40958858 155 - 69331447 TTGTTGCTCTGGTAAGGGCTATTAGAACTTA-AGAAAGGTTTCCTCTATTAATATGTTTG----GATTTTTTTCATTAGCATTCTTTGAAAATTATTTTATGAAT-AAAAAATAAGGTGAT---AAACT-CCATTTGATCATCAG---TTTCAGAGT----AAAATTTTTAA i canFam3.chr10 C 0 C 0 a score=1063886.000000 s hg38.chr22_KI270876v1_alt 188766 356 + 263666 AAATTTTTT--CTTTTTTACCTCCAGAG-GAAGTTCCCTTGAATCCTCTTAGCCAAAAACAAAATATGACTATCAAACAAAAGACATAAACACTTTTAGATATGATTA-ATTGCCAACGTAATATCCAACACAGCATATCACACCACTTTTTAAAAACCAGTTCTgccaggcacagtggctcacacttgtaatctcagcactttgggaggctgaggtgggaggatcccttgagcctaggagttcgagaccagcctgggcaacatggcaaaaccctaactctactaaaaatacaaaaaattagctgggtgtggtggtgtgagcctgtagtcccagctactcaggcgactgaggcag-agaaa s panTro4.chr22 34567424 356 + 49737984 aaatttttt--cttttttaCCTCCAGAG-GAAGTTCCCTTGAATCCTCTTAGCCAAAAACAAAATATGACTATCAAACAAAAGACATAAACACTTTTAGATATGATTA-ATTACCAACGTAATATCCAACACAGCATATCACACCACTTTTTAAAAACCAGTTCTgccaggcacagtggctcacacctgtaatctcagcactttgggaggctgaggtgggaggatccctagagcccaggagtttgagaccagcctgggcaacatggcaaaaccctatctctactaaaaatacaaaaaattagctgggtgtggtggtgtgagcctgtactcccagctactcaggcaactgaggcag-agaaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30980822 356 + 46535552 taatttttt--cttttttaCCTCCAGAG-GAAGTTCCCTTGAATCCTCTTAGCCAAAAACAAAATACGATTATCAAACAAAAGACATAAACACTTTTAGATATGATTA-ATTACCAACGTAATATCCAACACAGCATATCACACCACTTTTTAAAAACCAGTTCTgccaggcacagtagctcacacctgtaatctcagcactttgggaggctgaggtgggaggatcccttgagcccaggagttcgagaccagcct-ggcaacacggcaaaaccctatctctactaaaaatacaaaaaattagctgggtgtggtggcgtgagcctgtagtcccagctactcatgtgattgaggcagaagaaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100538414 357 - 115148730 taatttttt--cttttttACCTCCAGAG-GAAGTTCCCTTGAATCCTCTTAGCCAAAAACAAAAAATGATTATCAAACAAAAGACGTAAACACTTTTAGATATGATTA-ATTACCAACGTAATATCCAACATAGCATATCACACCACTTTTTAAAAACCAGTTTTgccagacacagtggctcacgcctgtaatctcagcactttgggaggctgagttgggaggatcccttgagcccaggagttcaagaccagcctgggcaacatggcaaaaccctatctctactaaaaatacaaaaaattagctgggtgtggtggtgtgaaactgtagtcccagctactcaggcgattcaggcagaagaaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80684992 357 + 95678458 taatttttttctttttttaCCTCCAGAG-GAAGTTCCCTTGAATCCTCTTAGCCAAAAACAAAATAT---TATCAAACAAAAGACATAAACACTTTTAGATACGATTATTTTACCAACGTAATATCCAACACAGCATATCACACCACTTTTTAAAAACCAGTTTTgccaggcacagtggctcacacctgtgatctcagcactttgggaggccgaggtgagaggatcccttgagcccaggagtttgagaccagcctgggctacatggtgaaaccctatctctactaaaaatacaaaaaattagctgggtgtagcggtgtgcgcctatagtcccagctactccggagattgaggcagaggaat i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81111033 357 - 96509753 AAATTTTTTTCTTTTTTTACCTCCAGAG-GAAGTTCCCTTGAATCCTCTTAGCCAAAAACAAAATAT---TATCAAACAAAAGACATAAACACTTTTAGATACGATTATTTTACCAACGTAATATCCAACACAGCATATCACACCACTTTTTAAAAACCAGTTTTgccaggcacagtggctcacacctgtgatctcagcactttgggaggccgaggtgagaggatcccttgagcccaggagtttgagaccagcctgggctacatggtgaaaccctatctctactaaaaatacaaaaaattagctgggtgtagcggtgtgcgcctatagtcccagctactccggagattgaggcagaggaat i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76368481 357 + 90941950 aaatttttttctttttttaccttcaGAG-GAAGTTCCCTTGAATCCTCTTagccaaaaacaaaatat---tatcaaacaaaagacataaacactTTTAGATACGATTATTTTACCAACGTAATATCCAACACAGCATATCACACCACTTGTTAAAAACCAGTTttgccaggcacactggctcacacctgtgatctcagcactttgggaggccgaggtgagaggatcccttgagcccaggagtttgagaccagcctgggctacatggtgaaaccctatctctactaaaaatacaaaaaattagctgggtgtggcagtgtgcacctatagtcccagctactccggagattgaggcagaggaat i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18636347 357 + 33263144 AAATTTTTTTCCTTTTTTACCTCCAGAG-GAAGTTCCCTTGAATCCTCTTAGCCAAAAACAAAATAT---TATCAAACAAAAGACATAAACACTTTTAGATACGATTATTTTACCAACGTAATATCCAACACAGCATATCACACCACTTTTTAAAAACCAGTTTTgccaggcacagtggctcacacctgtgatctcagcactttgggaggccgaggtgagaggatcccttgagcccaggagtttgagaccagcctgggctacgtggtgaaaccctctctctactaaaaatacaaaaaattagctgggtgtggcagtgtgcgcctatagtcccagctactccggagattgaggcagaggaat i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198339706 351 + 210400635 ------TTT--TTTTCTTATCTCCAGAG-GAAGTTATCTTGAATCCTCTTAGCCAAAACCAAAATATGATTATCAAACAAAAGACATAAATACTTTTAGATATAATTATTTTACCAACGTAATATCCAACACAACACACCACACCACTTTTTGAGAACCAGTTTTgccaggcacagtggctcacacctgtaatctcagcactttgtgaggctaaggtggcaggatcctttgagcccaggagttcaagaccagcctgggcaacatggcaaaggcctatctctactaaaaatac-aaaagttagttgggtgaggtggtttgcgcctgtagtcccagctactcggcagattgaggcagaagaat i calJac3.chr1 C 0 C 0 s canFam3.chr10 40959013 207 - 69331447 -------------AAATTATCTACAGAGTTAAGTTCCCTTCAACCACCTTAGCCAAAAACAAAGTATGAATATCAAACAAAAGATACAAATACTTTTAGACAGGATTATTTCATCAATGTAATATCCAACGCTGCATATCACATCACTTTTTTAAAACTAGGTTTG---------------------------------ATTTTA-------------------------------------------------------------------CCTATATGAACTATTAAAACAGGAA-------GGGAGGGAGGGTG---------------------------------GGAAGAGAGA- i canFam3.chr10 C 0 C 0 e mm10.chr15 77178734 2720 + 104043685 I a score=469502.000000 s hg38.chr22_KI270876v1_alt 189122 163 + 263666 aacctgagcccagaaagttgaggctgtagtgagccacaatggcaccactgcactccagcctgagcaatgggacctgggtgacaggaatgacatgctgtctcaa----------------------------aaataaataaacaaatataaaaaCCAGTTTTTATATTACCTATATAAACTATTGGAACTT s panTro4.chr22 34567780 163 + 49737984 aacctgagcccagaaagttgaggctgtagtgagccacaatggcaccactgcactccagcctgagcaatgggacctgggtgacaggaatgacatgctgtctcaa----------------------------aaataaataaacaaatataaaaaCCAGTTTTTATATTACCTATATAAACTATTGGAACTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30981178 163 + 46535552 aacctgagcccagaaagttgaggctgtagtgggccacaatggcaccactgcactgcagcctcagcaatgggacctgggtgacaggaatgagatgctgtctcaa----------------------------aaataaataaacaaatataaaaaCCAGTTTTTATATTACCTATATAAACTATTGGAACTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100538771 163 - 115148730 aacctgagcccagaaggttggggctgtagtgagccacaatggcaccactgcattccagcatgagcaatgggacctgggtgacaggaatgagatgctgtctcaa----------------------------aaataaataaacaaatataaaaaCCAGTTTTTATATTACCTATATAAACTATTGGAACTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80685349 167 + 95678458 cacctgagcccagaaagttgaggctgtagtgaaccacaacggcaccactgcactctagcctgagcaaTGGGATCTGGGTGACAGGAATGAGATGCTGTCTCAA------------------------aaataaataaataaataaataTAAAAACCAGTTGTTATATTACCTATATAAACAATTGGAACTT i rheMac3.chr10 C 0 I 4 s macFas5.chr10 81111390 167 - 96509753 cacctgagcccagaaagttgaggctgtagtgaaccacaacggcaccactgcactctagcctgagcaatgggatctgggtgacaggaatgagacgctgtctcaa------------------------aaataaataaataaataaatataaaaaCCAGTTGTTATATTACCTATATAAACAATTGGAACTT i macFas5.chr10 C 0 I 4 s papAnu2.chr10 76368838 167 + 90941950 cacctgagcccagaaagttgaggctgtagtgaaccacaacggcaccactacactctagcctgagcaatggGATCTGGGTGACAGGAataagacgctgtctcaa------------------------aaataaataaataaataaatataaaaaccagttgttatattacctatataaacaattggaactt i papAnu2.chr10 C 0 I 4 s chlSab2.chr19 18636704 191 + 33263144 cacctgagcctagaaagttgaggctgtagtgaaccacaatggcaccactgcactctagcctgagcaatgggatctgggtgacaggaatgagatgctgtctcaaaaataaataaataaataaataaataaataaataaataaataaataTAAAAACCAGTTGTTATATTACCTATATAAACAATTGGAACTT i chlSab2.chr19 C 0 I 4 s calJac3.chr1 198340057 157 + 210400635 cacctgagcccagaaagttgaggctgcagtgag-catgatggcactattgcagttcagcctgagcactgggacctgggtgacaggaatgagatgttgtctcaa--------------------------------aaaTAATTAAATATAAAAACCAGTTA-TATATTTCCTATATAAACTATTGGAACTT i calJac3.chr1 C 0 I 312 e mm10.chr15 77178734 2720 + 104043685 I e canFam3.chr10 40959220 0 - 69331447 C a score=26532.000000 s hg38.chr22_KI270876v1_alt 189285 8 + 263666 AAGAAAAA s panTro4.chr22 34567943 8 + 49737984 AAGAAAAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30981341 8 + 46535552 AAGAAAAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100538934 8 - 115148730 AAGAAAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80685520 8 + 95678458 AAGAAAAA i rheMac3.chr10 I 4 C 0 s macFas5.chr10 81111561 8 - 96509753 AAGAAAAA i macFas5.chr10 I 4 C 0 s papAnu2.chr10 76369009 8 + 90941950 aagaaaaa i papAnu2.chr10 I 4 C 0 s chlSab2.chr19 18636899 8 + 33263144 AAGAAAAA i chlSab2.chr19 I 4 C 0 s calJac3.chr1 198340526 8 + 210400635 aagaaaaa i calJac3.chr1 I 312 C 0 e mm10.chr15 77178734 2720 + 104043685 I e canFam3.chr10 40959220 0 - 69331447 C a score=264703.000000 s hg38.chr22_KI270876v1_alt 189293 72 + 263666 TTAGGATAGAAATTTTGGCTTGAATCAAATAAGGACCAATACTAATATGTAGAACCTTCATAGAAAGTGTAG s panTro4.chr22 34567951 72 + 49737984 TTAGGATAGAAATTTTGGCTTGAATCAAATAAGGACCAATACTAATATGTAGAACCTTCACAGAAAGTGTAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30981349 72 + 46535552 TTAGGATAGAAATTTTGGCTTGAATCAAATAACGACCAATACTAATATGTAGAACCTTCATAGAAAGTGTGG i ponAbe2.chr22 C 0 I 5714 s nomLeu3.chr7b 100538942 72 - 115148730 TTAGGATAGAAATTTTGGCTTGAATCAAATAAGGACCAATACTAATATGTAGAACCTTCATAGAAAGTGTGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80685528 72 + 95678458 TTAGGATAGAAATTCTGGCTTGAATCAAATAAGGACCAATACTAATATGTAGAACCTTCATAGAAAGTGTGG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81111569 72 - 96509753 TTAGGATAGAAATTCTGGCTTGAATCAAATAAGGACCAATACTAATATGTAGAACCTTCATAGAAAGTGTGG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76369017 72 + 90941950 ttaggataGAAATTCTGGCTTGAATCAAATAAGGACCAATACTAGTATGTAGAACCTTCATAGAAAGTGTGG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18636907 72 + 33263144 TTAGGATAAAAATTCTGGCTTGAATCAAATAAGGACCAATACTAATATGTAGAACCTTCATAGAAAGTGTGG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198340534 72 + 210400635 aTAGGATAGAAATTCTGGCTCAAATCAATTAAGGACCCATACTAATAGGTAAAACCTTCATAGAAAGCGTGG i calJac3.chr1 C 0 C 0 s canFam3.chr10 40959220 72 - 69331447 TTAAGATAGAAGTTCTGGTTCGAATCAATTAAGGATCAATACTAAATTGTAGAATCTTTCTAGAAAGTCTGG i canFam3.chr10 C 0 C 0 e mm10.chr15 77178734 2720 + 104043685 I a score=363865.000000 s hg38.chr22_KI270876v1_alt 189365 105 + 263666 GTTAACACCATAGTGCTTGTTACTTCCCATTTTAAACAGCAAAAGTGAGAAAGGATCTATCACAGATACTTTTGGAATAATCTTTTTAAAATAAGATAATAGGca s panTro4.chr22 34568023 105 + 49737984 GTTAACACCATAGTGCTTGTTACTTCCCATTTTAAACAGCAAAAGTGAGAAAGGATCTATCACAGATACTTTTGGAATAATCTTTTTAAAATAAGATAATAGGca i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30987135 105 + 46535552 GTTAATACCATAGTGCTTGTTACTTCCCATTTTAAACAGCAAAAGTGAGAAAGGATCTATCACAGATACTTTTGGAATAATCTTTTTAAAATAAGATAATAGGca i ponAbe2.chr22 I 5714 C 0 s nomLeu3.chr7b 100539014 105 - 115148730 GTTAATACCATAGTGCTTGTTACTTCCCATTTTAAACAGCAAAAGTGAGAAAGGATCTATCACAGATACTTTTGGAATAATCTTTTTAAAATAAGATAACAGGca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80685600 105 + 95678458 GTTAATACCATAGTGCTTGTTACTTCCCATTTTAAACAGCAAAAGTGAGAAAGGATCTATCACAGATACTTTTAGAATAATCTTTTTAAAACAATATAATAGGCT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81111641 105 - 96509753 GTTAATACCATAGTGCTTGTTACTTCCCATTTTAAACAGCAAAAGTGAGAAAGGATCTATCACAGATACTTTTAGAATAATCTTTTTAAAACAATATAATAGGca i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76369089 105 + 90941950 GTTAATACCATAGTGCTTGTTACTtcccattttaaacagcaaaagtGAGAAAGGATCTATCACAGATACttttagaataatctttttaaaacaatataataggca i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18636979 105 + 33263144 GTTAATACCATAGTGCTTGTTACTTTCCATTTTAAACAGCAAAAGTGAGAAAGGATCTATCACAGATACTTTTAGAATAATCTTTTAAAAATAATATAATAGGca i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198340606 99 + 210400635 GTT-----CACAGTGCTTGTTACTTCCCA-TTTAAACAGCAAAAGTGACAAAGGATCTATTAAAGATACTTTTGGAATAATCTTTTTAAAATAAGATAATAGGca i calJac3.chr1 C 0 C 0 s canFam3.chr10 40959292 101 - 69331447 GTTAATACTACAGTACTTGTTACTTCCCACTTAAAACCACCA---TGAGAAAGGACCTATCATGGATAC-TTTGAAATCATCTTTCAATACTAAGATCACATGCA i canFam3.chr10 C 0 I 1322 e mm10.chr15 77178734 2720 + 104043685 I a score=338802.000000 s hg38.chr22_KI270876v1_alt 189470 113 + 263666 ggcgtggtggctgacacctgtaatcctaccaatctgggaggccaaggtgggaggactgcttcagcccaggagttcaagaccagcctggacaacatagtcaggccctgtctcta s panTro4.chr22 34568128 113 + 49737984 ggcgtggtggctgacgcctgtaatcctaccaatccgggaggccaaggtgggaggacagcttcagcccaggagttcaagaccagcctggacaacatagtcaggccctgtctcta i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30987240 113 + 46535552 ggcacagtggctgacgcctgtaatcctaccaatctgggaggccaaggtgggaggactgcttcagcccaggagttcaagaccagcctggacaacatagtcagaccctgtctcta i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100539119 112 - 115148730 ggtgcagtggctgacgcctgtaatcctgcc-atctgggaggccaaggtgggaggattgcttcagcccaggagttcaagaccagcctggacaacatagtgagaccctgtctcta i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80685705 113 + 95678458 ggcgcagtggctgatgcctgtaatcctgccaacctgggaggccaaggtgggaggattgcttcagcctaggagttcaagaccagcctggataacacagtgataccctgtctcta i rheMac3.chr10 C 0 I 1617 s macFas5.chr10 81111746 113 - 96509753 ggcgcagtggctgatgcctgtaatcctgccaacctgggaggccaaggtgggaggattgcttcagcctaggagttcaagaccagcctggataacacagtgataccctgtctcta i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76369194 113 + 90941950 ggcacagtggctgatgcctgtaatcctgccaacctgggaggccaaagtgggaggattgcttcagcctaggagttcaagaccagcctggataacacagtgataccctgtctcta i papAnu2.chr10 C 0 I 1 s chlSab2.chr19 18637084 113 + 33263144 ggcgcagtggctgatgcctgtaatcctgccaacctgggaggccaaggtgggagcattgcttcagcctaggagttcaagaccagcctggataacacagtaataccctgtctcta i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198340705 113 + 210400635 ggcacagtggctgatgcctgtaatcctaccaatttgggaggccaaggtgggaggattgcttcagcccaggagttcaagatcagcctgggaaacacagtaagaccatgtctcta i calJac3.chr1 C 0 C 0 e mm10.chr15 77178734 2720 + 104043685 I e canFam3.chr10 40959393 1322 - 69331447 I a score=48880.000000 s hg38.chr22_KI270876v1_alt 189583 42 + 263666 ttt---------------taaaaaaaaaaaaat------------------taaaaactagccaggtgtggtggc s panTro4.chr22 34568241 43 + 49737984 ttta--------------aaaaaaaaaaaaaac------------------taaaaactagccaggtgtggtggc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30987353 40 + 46535552 t-----------------taaaaaaaaaaaaat------------------taaaaactagccaggtgtggtggc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100539231 38 - 115148730 tt-------------------aaaaaaaaaaat------------------taaaaactagccaggtgtggtggc i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81111859 61 - 96509753 ctta--------------aaaataaaataaaataaaataaaataaaataaataaaaactagccaggtatggtggc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76369308 75 + 90941950 tttaaaataaaataaaataaaataaaataaaataaaataaaataaaataaataaaaactagccaggtatggtggc i papAnu2.chr10 I 1 C 0 s chlSab2.chr19 18637197 47 + 33263144 ctta--------------aaaataaaataaaata--------------aaataaaaactagccaggtatggtggc i chlSab2.chr19 C 0 I 1429 s calJac3.chr1 198340818 34 + 210400635 -----------------tttaaaaaataaaaat------------------ta------ggccaggcgcggtggc i calJac3.chr1 C 0 C 0 e mm10.chr15 77178734 2720 + 104043685 I e canFam3.chr10 40959393 1322 - 69331447 I e rheMac3.chr10 80685818 1617 + 95678458 I a score=3885.000000 s hg38.chr22_KI270876v1_alt 189625 5 + 263666 acgtg s panTro4.chr22 34568284 5 + 49737984 acgtg i panTro4.chr22 C 0 I 1691 s ponAbe2.chr22 30987393 5 + 46535552 acgtg i ponAbe2.chr22 C 0 I 1686 s nomLeu3.chr7b 100539269 5 - 115148730 atgtg i nomLeu3.chr7b C 0 I 1907 s macFas5.chr10 81111920 5 - 96509753 ttgtg i macFas5.chr10 C 0 I 1673 s papAnu2.chr10 76369383 5 + 90941950 ttgtg i papAnu2.chr10 C 0 I 1366 s calJac3.chr1 198340852 5 + 210400635 tcaag i calJac3.chr1 C 0 C 0 e mm10.chr15 77178734 2720 + 104043685 I e canFam3.chr10 40959393 1322 - 69331447 I e rheMac3.chr10 80685818 1617 + 95678458 I e chlSab2.chr19 18637244 1429 + 33263144 I a score=7821.000000 s hg38.chr22_KI270876v1_alt 189630 2 + 263666 cc s panTro4.chr22 34569980 2 + 49737984 CC i panTro4.chr22 I 1691 C 0 s ponAbe2.chr22 30989084 2 + 46535552 CC i ponAbe2.chr22 I 1686 C 0 s nomLeu3.chr7b 100541181 2 - 115148730 CC i nomLeu3.chr7b I 1907 C 0 s rheMac3.chr10 80687435 2 + 95678458 CC i rheMac3.chr10 I 1617 C 0 s macFas5.chr10 81113598 2 - 96509753 CC i macFas5.chr10 I 1673 C 0 s papAnu2.chr10 76370754 2 + 90941950 CC i papAnu2.chr10 I 1366 C 0 s chlSab2.chr19 18638673 2 + 33263144 CC i chlSab2.chr19 I 1429 C 0 s calJac3.chr1 198340857 2 + 210400635 cc i calJac3.chr1 C 0 I 1960 s canFam3.chr10 40960715 2 - 69331447 CT i canFam3.chr10 I 1322 C 0 e mm10.chr15 77178734 2720 + 104043685 I a score=59002.000000 s hg38.chr22_KI270876v1_alt 189632 22 + 263666 AAGTTTCCACTAAGTATGGGCA------------- s panTro4.chr22 34569982 22 + 49737984 AAGTTTCCACTAAGTATGGGCA------------- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30989086 22 + 46535552 AAGTTTCCACTAAGTATGGGCA------------- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100541183 22 - 115148730 AAGTTTCCACTAAGTATGGGCA------------- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80687437 22 + 95678458 AAGTTTCTACTAAGTATGGGCA------------- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81113600 22 - 96509753 AAGTTTCTACTAAGTATGGGCA------------- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76370756 22 + 90941950 AAGTTTCTACTAAGTATGGGCA------------- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18638675 22 + 33263144 AAGTTTCTACTAAGTATGGGCA------------- i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40960717 35 - 69331447 AAATTTTGGCTAAGTCTGGGTAGAGGGAGATGACA i canFam3.chr10 C 0 C 0 e mm10.chr15 77178734 2720 + 104043685 I e calJac3.chr1 198340859 1960 + 210400635 I a score=844780.000000 s hg38.chr22_KI270876v1_alt 189654 227 + 263666 CTAGTTAATGTATTCTTAATatggttgagcttcacaaggcccatgatctcctgaaaactgtgttgcaaaatgttg----taaatacgtacactgttctggggacctagtccagagatttcattaaattctcaaagatgttcgagactcaaaataaagattaagaaacaACAGGCCAGAA-ATTAACAAGGTCATGAGACAATTCCTTCTTTAAGGTATTGTTCCATTTAAAC s panTro4.chr22 34570004 227 + 49737984 CTAGTTAATGTATTCTTAATatggttgagcttcacaaggccgatgatctcctgaaaactgtgttgcaagatgttg----taaatacgtacactgttctggggacctagtccagagatttcattaaattctcaaagatgttcgagactcaaaataaagattaagaaacaACAGGTCAGAA-ATTAACAAGGTCATGAGACAATTCCTTCTTTAAGGTATTGTTCCATTTAAAC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30989108 227 + 46535552 CTAGTTAATGTATTCTTAATatggttgagcttcacaaggcccatgatctcctgaaaactgtgttgcaaaatgttg----taaatacgtacactgttctggggacctagtccagagatttcattaaattctcaaagatgttcaagactcaaaataaagattaagaaacaACGGGCCAGAA-ATTAACAAGGTCATGAGACAATTCCTTCTTTAAGGTATTGTTCCATTTAAAC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100541205 227 - 115148730 CTAGTTAATGTATTCTTAATatggttgagcttcacaaggcccatgatctcctgaaaactgtgttgcaaaatgttg----taaatacgtacactgttctggggacctagtccagagatttcattaaattctcaaagatgttcaagactcacaataaagattaagaaacaACAGGCCAGAA-ATTAACAAGGTCATGAGACAATTCCTTCTTTAAGGTATTGTTCCATTTAAAC i nomLeu3.chr7b C 0 I 970 s rheMac3.chr10 80687459 232 + 95678458 CTAGTTAATGTATTCTTAAcatggttgtgtttcacaaggctcatgatctcctgaaaactgtgttgcaaaatgttgtaaataaatacgtacactgttctggggacctagtccagagctttcattaaattctcaatgatgttcaagactcaaagtaaagattaagCAACAACAGGCCAGAACATTAACAAGGTCATGAGACAATTCCTTCTTTAAGGTATTGTTCCATTTAAAC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81113622 232 - 96509753 CTAGTTAATGTATTCTTAAcatggttgtgtttcacaaggctcatgatctcctgaaaactgtgttgcaaaatgttgtaaataaatacgtacactgttctggggacctagtccagagctttcattaaattctcaatgatgttcaagactcaaagtaaagattaagaaacaACAGGCCAGAACATTAACAAGGTCATGAGACAATTCCTTCTTTAAGGTATTGTTCCATTTAAAC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76370778 228 + 90941950 CTAGTTAATGTATTCTTAACATGGTTGTGTTTCACAAGGCTCATAATCTCCTGAAAACTGTGTTGCAAAATGTTG----TAAATACGTACACTGTTCTGGGGACCTAGTCCAGAGCTTTCATTAAATTCTCAATGATGTTCAAGACTCAAAATAAAGATTAAGAAACAACAGGCCAGAACATTAACAAGGTCATGAGACAATTCCTTCTTTAAGGTATTGTTCCATTTAAAC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18638697 228 + 33263144 CTAGTTAATGTATTCTTAAcatggttgtgtttcacaaggctcatgatctcctgaaaactgtgttgcaaaatgttg----taaatacgtacactgttctggggacctagtccagagctttcattaaattctcaatgatgttcaagactcaaaataaagattaagaaacaACAGGCCAGAACATTAACAAGGTCATGAGACAATTCCTTCTTTAAGGTATTGTTCCATTTAAAC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198342819 228 + 210400635 cTAGTTAATGTATTCTTAATGtggttgagcttcacatggcccatgatctcctgaaaaccgtgttgcaaaatgttg----taaatatgtacactgttttggggacattgtccagagctttcattaaattctcaatgatgttcgaggctcaaaataaagactaagaaacaACGTGACAGAAAATTAACAAGGTCATGAGACAATTCCTTCTTTAAGGTGTTGTGCCATTTAAAC i calJac3.chr1 I 1960 C 0 s canFam3.chr10 40960752 227 - 69331447 AGAGTTAATGCATTCTTAATatggttgggcttcacagggcccatgatcctctgaaaattgtg-tgcaaaatgttg----taaatatgtacattgttctggggacctggtccagagctttcattagattctcaatgaggttcaagacccaaaatgaagattgagaaccaATAGGCCAGAAAATTAACAGGGTTTTGAGATAATTCCTTCTTTATGGAGCTGTTCCATTCAAAC i canFam3.chr10 C 0 C 0 e mm10.chr15 77178734 2720 + 104043685 I a score=374284.000000 s hg38.chr22_KI270876v1_alt 189881 113 + 263666 ACACCTATCTTTCCTTGGCAAACAATCATTACTTCTAGTTTAGGTATTTCCCCCC-AAGTCTACTTCCTAATGCTACCTCTTTTGAATGTTTTCCTTTGGTTAAAGGGC------TTTAC s panTro4.chr22 34570231 114 + 49737984 ACACCTATCTTTCCTTGGCAAACAATCATTACTTCTAGTTTAGGTATTTCCCCCCCAAGTCTACTTTCTAATGCTACCTCTTTTGAATGTTTTCCTTTGGTTAAAGGGC------TTTAC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30989335 113 + 46535552 ACACCTATCTTTCCTTGGCAAACAATCATTACTTCTAGTTTAGTTATTTCCCCCC-AAGTCTACTTCCTAATGCTACCTCTTTTCAATGTTTTCCTTTGGTTAAAGGGC------TTTAC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100542402 113 - 115148730 aCACCTATCTTTCCTTGGCAAACAATCATTACTTCTAGTTTAGGTATTTCCCCCC-AAGTCTTCTTCCTAATGCTACCTCTTTTCAATGCTTTCCTTTGGTTAAAGGGC------TTTAC i nomLeu3.chr7b I 970 C 0 s rheMac3.chr10 80687691 108 + 95678458 ACACCTATCTTTCCTTG----CCGATCATTACTTCTAGTTTAGGTATTTCTCCC--AAGTCTACTTCCTAATCCTTCCTCTTTTGAATGTTTTCCTTTGGTTAAAGGGC------TTTAC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81113854 108 - 96509753 ACACCTATCTTTCCTTG----CCGATCATTACTTCTAGTTTAGGTATTTCTCCC--AAGTCTACTTCCTAATCCTTCCTCTTTTGAATGTTTTCCTTTGGTTAAAGGGC------TTTAC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76371006 108 + 90941950 ACACCTATCTTTCCTTG----CCGATCATTACTTCTAGTTTAGGTATTTCCCCC--AAGTCTACTTCCTAATCCTACCTCTTTTGAATGTTTTCCTTTGGTTAAAGGGC------TTTAC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18638925 108 + 33263144 ACACCTATCTTTCCTTG----CCGATCATTACTTCTAGTTTAGGTATTTCCCCC--AAGTCTACTTCCTAATCCTACCTCTTTTGAATGTTTTCCTTTGGTTAAAGGGC------TTTAC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198343047 112 + 210400635 ATACCTATCTTTCCTTGGCAAACAATAATTACTTCTAGTTTAGGTATTTCCCCC--ACGTCTGCTTCCTAATCCTACATCTTTTGAATGTTTTCCTTTGGTTAAAGGGC------TTTAC i calJac3.chr1 C 0 C 0 s canFam3.chr10 40960979 118 - 69331447 ACTTCTATTTTTCCCTGATGAACAACTAATATTTCTAGTTTAGGTATTTCCCCT--AAGCTCACATCCTAATCCTACCTCTTTTGAATGTTTCCCTTTGATTAAGGGACCTTTATTTTAT i canFam3.chr10 C 0 C 0 e mm10.chr15 77178734 2720 + 104043685 I a score=483928.000000 s hg38.chr22_KI270876v1_alt 189994 148 + 263666 CTTTATTTCTAACCCTCAACTGCTTTCACAGAAACCTCAATCCCTTTTTCTACTAAGGGCTAGGCCAGAGATCCAATTCCTAGGCTACCCCACCCCACTGTGATTCTTTCAAGTCAGGAACCAACTG-ACAAGAAAACATTCCAGCTCC s panTro4.chr22 34570345 148 + 49737984 CTTTATTTCTAACCCTCATCTGCTTTCACAGAAACCTCAATTCCTTTTTCTACTAAGGGCTAGGCCAGAGATCTAATTCCTAGGCTACCCCACCCCACTGTGATTCTTTCAAGTCAGGAACCAACTG-ACAAGAAAACATTCCAGCTCC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30989448 148 + 46535552 CTTTATTTCTAACCCTCATGTGCTTTCATAGACACCTCAATCCCTTTTTCTACTAAGGGCTAGGCCAGAGATCCAATTCCTAGCCTACCCCACCCCACTGTGATTCTTTCAAGTCAGGAACCAACTG-ACAAGAAAACGTTCCAGCTCC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100542515 148 - 115148730 CTTTATTTTTAACCCTCATCTGCTTTCACAGAAACCTCAATCCCTTTTTCTACTAAGGGCTAGGCCAGAGATCCAATTCCTAGGCTACCCCACCCCACTGTGATTCTTTCAAGTCAGGAACCAACTG-ACAAGAAAACATTCCAGCTCC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80687799 123 + 95678458 CTTCATTTCTAACCCTCACCTGCTTTCATAAAAACCTCAATCCCTTTTTCTACTAAGAGCTAGGCCAGAGATCCAATTCCCAGGCTACCCCACC--------------------------CCAACTGAACAAGAAAACACTCCAGCTCC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81113962 123 - 96509753 CTTCATTTCTAACCCTCACCTGCTTTCATAAAAACCTCAATCCCTTTTTCTACTAAGAGCTAGGCCAGAGATCCAATTCCCAGGCTACCCCACC--------------------------CCAACTGAACAAGAAAACACTCCAGCTCC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76371114 148 + 90941950 CTTCATTTCTAACCCTCACCTGCTTTCATAAAAACCTCAATCCCTTTTTCTACTAAGAGCTAGGCCAGAGATCCAATTCCCAGGCTACCCCACCCCACTGTGATTCTTTCAAGTCAGGAACCAACTG-ACAAGAAAACACTCCAGCTCC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18639033 148 + 33263144 CTTCATTTCTAACCCTCACCTGCTTTCATAAAAACCTCAATCCCTTTTTCTACTAAGAGCTAGGCCAGAGATCCAATTCCCAGGCTACCCCACCCCACTGTGATTCTTTCAAGTCAGGAACCAACTG-ACAAGAAAACACTCCAGCTCC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198343159 142 + 210400635 CTTCATTCCTAACCCTCATCTCCTTTCACAAAAACCCCAAACTCCTTTTCTACTAAGAGCTAGGCCAGAGATCCAACTCCTGGCCTACCCTACCCCACTG------ATTCAAGTTAGGAACCAACTG-ACAAGAAAACACTCCAGCTCT i calJac3.chr1 C 0 C 0 s mm10.chr15 77181454 127 + 104043685 CCTCATTCATAACAGTTGCCTCTGTTCACA------TCAAT---------TATTAAAGGATAGGCCCAAGATCTAAACCCTAGCCTATCAAGTC-----ATGACTCTTTCAAGGCAGGGACTGACTG-GGGAG-ATACATTCCAGCTCC i mm10.chr15 I 2720 I 63 s canFam3.chr10 40961097 134 - 69331447 TTTCATTTCTAAACCTCTCCTCCTTTCACA-AAACCTCAACTGCCTCCTCCTCTAAGGGCTAGGCCCAAGATCCAAATCCTAG---------TCCCATTGTCATTCTTCCAAGTCAGCAACCAACTG-AC----AAATGTTCCAGCTCC i canFam3.chr10 C 0 C 0 a score=234262.000000 s hg38.chr22_KI270876v1_alt 190142 71 + 263666 AACACATTCCAACTGTCTTACTAAAGGGGCTAG-TCCACTAAGAAAGACTTCTGTGGGGTTTTGTTGTTTGT s panTro4.chr22 34570493 71 + 49737984 AACACATTCCAACTGTCTTACTAAAGGGGCTAG-TCCACTAAGAAAGACTTCTGTGGGGTTTTGTTGTTTGT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30989596 71 + 46535552 AACACATTCCAACTGTCTTACTAAAGGGGCTAG-TCCACTAAGAAAGCCTTCTGTGGGGTTTTGTTGTTTGT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100542663 71 - 115148730 AACACATTCCAACTGTCTTACTAAAGGGGCTAG-TCCACTAAGAAAGACTTCTGTGGGGTTTTGTTGTTTGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80687922 71 + 95678458 AACACATTCCAACTGTCTTACTAAGTGGGCTAG-TTCACTAAGAAAGACGTCTGTGGCGTTTTGTTGTTTGT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81114085 71 - 96509753 AACACATTCCAACTGTCTTACTAAGTGGGCTAG-TTCACTAAGAAAGACGTCTGTGGCGTTTTGTTGTTTGT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76371262 71 + 90941950 AACACATTCCAACTGTCTTACTAAGTGGGCTAG-TTCACTAAGAAAGACGTCTGTGGCGTTTTGTTGTTTGt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18639181 71 + 33263144 AACACATTCCAACTGTCTTACTAAGGGGGCTAG-TTCACTAAGAAAGACGTCTGTGGCGTTTTGTTGTTTGT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198343301 72 + 210400635 AACACATTCCAACTGTCTTACTAAGTGGGGGGGTTCCATTAAGAAAGATTTTTGTGGAGTTTTACTGTTTGT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40961231 68 - 69331447 --AATATTCCAACTGTCCTATTAAG-GGGCTAG-TCCCCTAAGAGAGATCTTTGTtgtatgtgtgtgtgtgt i canFam3.chr10 C 0 I 7 e mm10.chr15 77181581 63 + 104043685 I a score=1064120.000000 s hg38.chr22_KI270876v1_alt 190213 409 + 263666 Tgtggtgcgatctcggctcactgcaacct--gcttcctgggttcaagcgattctctgcctcagcctccctagtag---ctgggattacaggcacccaccgccacgcctggctaatttttgtatttttagtaaagacagggtttcacttgtccagt---ccaggctggtctggaactcctgacctcaagtgatttacctgcctcagcctcccaaaatgctgggattacaggcatgagccaccacacccagccAACGGCTGACCaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaTGTa--gacagggtctcaatatgttgtccaagcttgtctggaactcctggcctcaagccatcttcccacttcagcttctgaaagtgctgggattctaggcgtgagcc---TTTTGATGTTGTTT s panTro4.chr22 34570564 399 + 49737984 Tgtggtgcgatctcggctcactgcaacct--gcttcctgggttcaagcgattctctgcctcagcctccctagtagtagctgggattacaggcacccgccgccacgcccggctaatttttgtatttgtagtaaagacagggtttcac----catgt---ccaggctggtctggaactcctgacgtcaagtgatttacctgcctcagcctcccaaaatgctgggattacaggcatgagccaccacacccagccAACGCCTGACCaaaaaaaaaaaaaaaaaaaaaaaaa-----------TGtacagacagggtctcaatatgttgtccaagcttgtctggaactcctggcctcaagcaatcttcccacttcagcttctcaaagtgctgggattctaggcgtgagcc---TTTTGATGTTGTTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30989667 382 + 46535552 Cgtggcgcgatcttggctcactgcaacct--gcttcctgggttcaagtgattctctgcctcagcttccctagtag---ctgggattacaggcacccaccactacacccggctaatttttgtatttttagtaaagacagggtttcac----catgt---ccaggctggtctggaactcctgatctcaagtgatccacctgccccggcctcccaaaatgctgggattacaggcatgagccaccacacccagccAACACCTGACCAAAAAAAAAAA-------------------------tgtagagacagggtctcaatatgttgtccaagcttgtctggaactcctggcctcaagtgatcttcccacttcagcttctcaaagtgctgggattctaggcgtgagcc---TGTTGATGTTGTTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100542734 382 - 115148730 CAtggcacgatctcggctcactgcaacct--gcttcctgggttcaagtgattctctacctcagcctccctagtag---ctgggattacaggcacccaccaccacgcccggctaatttttgtatttttaataaagacagagtttcac----cgtgt---ccaggctggtctggaactcctgacctcaagtgatccacctgcctcggcctcccaaaatgctgggattacaggcatgagccaccatacccagccAACGCCTGACAAAAAAAAAAAA-------------------------TGtagagacagagtctcaatatgttgtccaagcttgtctggaactcctggcctcaagcgatcttcccacttcagcttctcaaagtgctgggattctaggcgtgagcc---TGTTGATGTTGTTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80687993 369 + 95678458 Cgtggcgtgatctcggctcactgcaacct--gcttcctgggttcaggcgattctctgcctcagcctcccgaggag---ctgggattacaggcacccaccaccacacccagctaatttttgtatttttagtaaagacaggatttcac----catgt---cctggctggtctggaactcctgacctcaagtgatctgcctgcctcagcct-ccaaaatgctgggattacaggcatgagccaccacacc-------------ACCAAAAAAAAT---------------------------TGtagagacagagtctcaatatgttgtccaagcttgtctggaactcctggcctcaagcgatcttcccacttcggcctctcaaagcgctgggattataggcatgagccTGTTGTTGATGTCGTTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81114156 382 - 96509753 Cgtggcgtgatctcggctcactgcaacct--gcttcctgggttcaggcgattctctgcctcagcctcccgaggag---ctgggattacaggcacccaccaccacacccagctaatttttgtatttttagtaaagacaggatttcac----catgt---cctggctggtctggaactcctgacctcaagtgatctgcctgcctcagcct-ccaaaacgctgggattacaggcatgagccaccacacccagccAATGCCTGACCAAAAAAAAt---------------------------tgtagagacagcgtctcaatatgttgtccaagcttgtctggaactcctggcctcaagcgatcttcccacttcggcctctcaaagcgctgggattataggcgtgagccTGTTGTTGATGTCGTTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76371333 382 + 90941950 cgtggcgtgatctcggctcactgcaacct--gcttcctgggttcaagcgattctctgcctcagcctcccgaggag---ctgggattacaggcacccaccaccacacccagctaatttttgtatttttagtaaagacaggatttcac----catgt---cctggctggtctggaactcctgacctcaagtgatctgcctgcctcagcct-ccaaaatgctgggattacaggcatgagccaccacacctagccaatgcctgaccaaaaaaaat---------------------------tgtagagacagcgtctcaaTATGTTGTCCaagcttgtctggaactcctggcctcaagcgatcttcccacttcggcctctcgaagcgctgggattataggcgtaagcctgTTGTTGATGTCGTTT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18639252 382 + 33263144 Cgtggcgtgatctcggctcactgcaacct--gcttcctgggttcaagcgattctctgcctcagcctcccaaggag---ctgggattacaagcacccaccaccacgctcagctaatttttgtatttttagtaaagacaggatttcac----catgt---cctggctggtctggaactcctgacctcaagtgatctgcctgcctcagcct-ccaaaatgctgggattacaggcatgagccaccacacccagccAATGGCTGACCAAAAAAAAt---------------------------tgtagagacagcgtctcaatatgttgtccaagcttgtctggaactcctggcctcaagcgatcttcccacttcggcctctaaaagcgctgggattataggtgtgagccTGTTGTTGATGTCGTTT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198343373 389 + 210400635 Tgtggtgtgatctcagctccctgcaacctccacttcctgggttcaagcagttctctgcctcagcctcccaagtag---ctgggattacaggcatccgccaccaagcctggctaatttttgtatttttagtaaat-cagggtttcac----catattggtcaggctggtttggaactcctgacctcaagtgatccacccacctcagcctctcaaagtgctgggattacaagcatgagccaccacacctagccAATGCCTAGCtaattaaaaaaaaaaaaaat-----------------tGtagagacagggtcccaatatgctgtccaagctggtctggaactcccagcctgaagcgatcttcccacttcagcctttc-aagagctgggattataggtatgagca-------ccTGTTGTTT i calJac3.chr1 C 0 C 0 e mm10.chr15 77181581 63 + 104043685 I e canFam3.chr10 40961299 7 - 69331447 I a score=62391.000000 s hg38.chr22_KI270876v1_alt 190622 18 + 263666 TTTCTTT-AAACAGTTGTT s panTro4.chr22 34570963 18 + 49737984 TTTCTTT-AAACAGTTGTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30990049 18 + 46535552 TTTCTTT-AAACAGTTGTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100543116 18 - 115148730 TTTCTTT-AAACAGTTGTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80688362 18 + 95678458 TTTCTTG-AAACAGTTGTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81114538 18 - 96509753 TTTCTTG-AAACAGTTGTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76371715 18 + 90941950 TTTCTTG-AAACAGTTGTT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18639634 18 + 33263144 TTTCTTG-AAACAGTTGTT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198343762 19 + 210400635 TTTCTTTAAAAAAGTTGTT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40961306 18 - 69331447 tTTTCTT-AAACAGTTGTT i canFam3.chr10 I 7 C 0 e mm10.chr15 77181581 63 + 104043685 I a score=790076.000000 s hg38.chr22_KI270876v1_alt 190640 210 + 263666 TAAGCTAATCTGG-TTCAAGTCCT-CAGGAGAAAATCTTGGGTCAAGAATATATTGCCCCTT-AT-GGTCATGTCCAAATTTTTCTCAAGTCATCCCTCATCTTTTAGTCTGAAGAAGCTCTAATGACATACTTCTACTGCAGACTTACCAAAGTGGAAATTCTTTTAGTCACTGTGAGAAAATGAGAGACTCTAAACCTGTG-TTTTTAACCAT s panTro4.chr22 34570981 210 + 49737984 TAAGCTAATCTGG-TTCAAGTCCT-CAGGAGAAAATCTTGGGTCAAGAATATACTGCCCCTT-AT-GGTCATGTCCAAATTTTTCTCAAGTCATCCCTCATCTTTTAGTCTGAAGAAGCTCTAATGACATACTTCTACTGCAGACTTACCAAAGTGGAAATTCTTTTAGTCACTGTGAGAAAATGAGAGACTCTAAACCTGTG-TTTTTAACCAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30990067 211 + 46535552 TAAGTTAATCTGG-TTCAAGTCCT-CAAGAGAAAATCTTGGGTCAAGAATATATTGCCCCTT-AT-GGTCATGTCCAAATTTTTCTCAAGTCATTCCACATCTTTTAGTCTGAATAAGCTCTAATGACATACTTCTACTGCAGACTTACCAAAGTGGAAATTCTTTTAGTCACTGTGAGAAAATGAGAGACTCTAAACCTGTGTTTTTTAACCAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100543134 211 - 115148730 TAAGCTAATCTGG-TTCAAGTCCT-CAACAGAAAATCTTGGGTCAAGAATATATTGCCCCTT-AT-GGTCATGTCCAAATTTTTCTCAAGTCATCCCACATCTTTTAGTCTGAATAAGCCCTAATGACATACTTCTACTGCAGACTTACCGAAGTGGAAATTCTTTTAGTCACTGCGAGAAAATGAGAGACTCTAAACCTGTGTTTTTTAACCAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80688380 203 + 95678458 TAAGCTAATCTGG-TTCAAGTCCT-CAAGAGAAAATCTT-GGTCAAGAATATATTGCCCCTT--------ATGTCCAAATTTTCCTCAAGTCATCTCACATC-TTTAGTCTGAATATGCTCTAATGACATACTTCTACTGCAGACTTACCAAAGTGGAAATTCTTTTAGTCACTGCGAGAAAATTAGAGACTCTAAACCTGTGTTTTTTAACCAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81114556 203 - 96509753 TAAGCTAATCTGG-TTCAAGTCCT-CAAGAGAAAATCTT-GGTCAAGAATATATTGCCCCTT--------ATGTCCAAATTTTCCTCAAGTCATCTCACATC-TTTAGTCTGAATATGCTCTAATGACATACTTCTACTGCAGACTTACCAAAGTGGAAATTCTTTTAGTCACTGCGAGAAAATTAGAGACTCTAAACCTGTGTTTTTTAACCAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76371733 210 + 90941950 TAAGCTAATCTGG-GTCAAGCCCT-CAAGAGAAAATCTT-GGTCAAGAATATATTGCCCCTT-AT-GGTCATGTCCAAATTTTCCTCAAGTCATCCCACATCTTTTAGTCTGAATATGCTCTAATGACATACTTCTACTGCAGACTTACCAAAGTGGAAATTCTTTTAGTCACTGCGAGAAAATTAGAGACTCTAAACCTGtgttttttaaccat i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18639652 210 + 33263144 TAAGCTAATCTGG-TTCAAGTCCT-CAAGAGAAAATCTT-GGTCAAGAATATATTGCCCCTT-AT-GGTCATGTCCAAATTTTCCTCAAGTCATCCCACATCTTTTAGTCTGAATATGCTCTAATGACATACTTCTACTGCAGACTTACGGAACTGGAAATTCTTTTAGTCACTGCGAGAAAATTAGAGACTCTAAACCTGTGTTTTTTAACCAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198343781 212 + 210400635 TAAGCTAATCTGG-TTCAAGTCCT-CAAGAGAAAATCCCAGGTCAAGAATATATTGCCCCTT-ATAGGTCATGTCCAGATTTTCCTCAAGTCATTTCACATCTTTTAGTCTGAATGAGCTCTAATGACATACTTTTACGGCAGACTTACCGAAGTGGAAATTCTTTTAGTCACTTTGAGAAAATTAGAGAATCTAAACCTGTATTTTTTAACCAT i calJac3.chr1 C 0 I 65 s mm10.chr15 77181644 204 + 104043685 TAAACTGATTTGG-CTTGAGATCTGCATGTGAAAATGTG-GGTCAGGGCTGCATCAGCCCTG----GGCTGTGCCTATATTTTAC-CACGTTATGCCACATCTTGGAGTCAGAACAAGTTCTAATGACATGCTTCTACTGTAGACTTACCAAAACTGAAATTCTTTTAGTC----TGAGAAAATGAAAGCCTCTAAACCAGCATTTCTTAACCAA i mm10.chr15 I 63 I 1 s canFam3.chr10 40961324 210 - 69331447 TAAACCAATCTGGCTTCAAATCCT-CAAGGGAAAATGTGGAGTCAAGATCCTGTTGTGCCTTTGT-GGCCATGCCTGAATTTTCCTCCAGTCATCCCACAGCTTTCAGTCTGAACATGCTGTCATGACATCCTGCTCCTGCAGACTTACTAAAGTGGAAATTCTTTT-GTCACTCT--AAACATTAGAGACTTGAAATCAGTGTTTTTAAACCAT i canFam3.chr10 C 0 C 0 a score=22787.000000 s hg38.chr22_KI270876v1_alt 190850 9 + 263666 TTTAAAAAC s panTro4.chr22 34571191 9 + 49737984 TTTAAAAAC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30990278 9 + 46535552 TTTAAAAAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100543345 9 - 115148730 TTTAAAAAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80688583 9 + 95678458 TTTAAAAAC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81114759 9 - 96509753 TTTAAAAAC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76371943 9 + 90941950 tttaaaaac i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18639862 9 + 33263144 TTTAAAAAC i chlSab2.chr19 C 0 C 0 s mm10.chr15 77181849 8 + 104043685 CTGAAAGA- i mm10.chr15 I 1 I 5 s canFam3.chr10 40961534 9 - 69331447 TTTTGAAAC i canFam3.chr10 C 0 C 0 e calJac3.chr1 198343993 65 + 210400635 I a score=277342.000000 s hg38.chr22_KI270876v1_alt 190859 71 + 263666 CTTTATCATA---------TTTACTTTTATCTTCTGAAACTTTCATCAACCCAGAATAGCACGTACAACC-TACTTTCTGA s panTro4.chr22 34571200 71 + 49737984 CTTTATCATA---------CTTACTTTTATCTTCTGAAACTTTCATCAACCCAGAATAGCACGTACAACC-TACTTTCTGA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30990287 71 + 46535552 CTTTATCATA---------CTTACTTTTATCTTCTGAAACTTTCATCAACCCAGAATAGCATGTACAACC-TACTTTCTGA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100543354 71 - 115148730 CTTTATCATA---------CTTACTTTTATCTTCTGAAACTTTCATCAACCCAGAATAGCACGTACAACC-TACTTTCTGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80688592 71 + 95678458 CTTTATCATA---------CTTACTTTTATCTTCTGAAACTTTAATCAACCCAGAATAGCACGTACAACC-TATTCTCTGA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81114768 71 - 96509753 CTTTATCATA---------CTTACTTTTATCTTCTGAAACTTTAATCAACCCAGAATAGCACGTACAACC-TATTCTCTGA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76371952 71 + 90941950 ctttatcaTA---------CTTACTTTTATCTTCTGAAACTTTAATCAACCCAGAATAGCACGTACAACC-TATTCTCTGA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18639871 71 + 33263144 CTTTATCATA---------CTTACTTTTATCTTCTGAAACTTTAATCAACCCAGAATAGCACGTACAACC-TATTCTCTGA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198344058 71 + 210400635 TTTTATCATA---------TTTCCTTTTATTTTCTGAGACTTCCACCAACCCAGAATAGCACATACAACC-TACTTTCTGA i calJac3.chr1 I 65 C 0 s mm10.chr15 77181862 70 + 104043685 CTTCATAATA---------CCCAC-TTTATCTTCGGAAGCTTCCAGGGGCCTACAACAGCACGTACCAGC-TATTTTCTGA i mm10.chr15 I 5 I 118 s canFam3.chr10 40961543 81 - 69331447 CCCTGTCCTACAACATTTGCTCACTTTTATCTTCTGAATCTTCCAACAACTTGGAAGAGCATACACAGCCTTACTTTCTGA i canFam3.chr10 C 0 C 0 a score=95264.000000 s hg38.chr22_KI270876v1_alt 190930 28 + 263666 AATGTTTATTATGAGTTAGAGGTTTAAA s panTro4.chr22 34571271 28 + 49737984 AATGTTTATTATGAGTTAGAGGTTTAAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30990358 28 + 46535552 AATGTTTATTATGAGTTAGAGGTTTAAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100543425 23 - 115148730 AATGTT-----TGAGTTAGAGGTTTAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80688663 28 + 95678458 AATGTTTATTATGAGTTAGAGGTTTAAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81114839 28 - 96509753 AATGTTTATTATGAGTTAGAGGTTTAAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76372023 28 + 90941950 AATGTTTATTATGAGTTAGAGGTTTAAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18639942 28 + 33263144 AATGTTTATTATGAGTTACAGGTTTAAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198344129 28 + 210400635 AATGTTTGTTATGAGTTAGGGGTTTAGA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40961624 28 - 69331447 AATGTTCAGTAGGACTCAGAGGTTTAAA i canFam3.chr10 C 0 C 0 e mm10.chr15 77181932 118 + 104043685 I a score=739865.000000 s hg38.chr22_KI270876v1_alt 190958 220 + 263666 TTTTTTTGAACTATACAGTCTCTT--ACTCTAACACTGAATTCTGATT----TATACCTCCCTCTCATTTCTGATTGAGATCATGGCTCTAAACATACAG-AATGTAAATATGGACTTTTGTGGCAAGGCCCTTTCAAAAGGTT-CAAAATAGTAGTCTATATGCAAAAGAAAAAGTATAACAGAAAAGGGGTTTGCAGTCACTGCTGTGTCATTAGAGAAACAATAA- s panTro4.chr22 34571299 216 + 49737984 TTTTTTTGAACTATACAGTCTCTT--ACTCTAACACTGAATTCTGATT----TATACCTCCCTCTCATTTCTGATTGAGATCATGGCTCTA----TACAG-AATGTAAATATGGACTTCTGTGGCAAGGCCCTTTCAAAAGGTT-CAAAATAGTAGTCTATATGCAAAAGAAAAAGTATAACAGAAAAGGGGTTTGCAGTCACTGCTGTGTCATTAGAGAAACAATAA- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30990386 220 + 46535552 TTTTTTTGAACTATATAGTCTCTT--ACTCTAACACTGAATTCTGATT----TATACCTCCCTCTCATTTCTGATTGAGATCATGGCTCTAAACATACAG-AATGTAAATATGGACTTCTGTGGCAAGGCCCTTTCAAAAGATT-CAAAATAGTAGTCTATATGCAAAAGAAAAAGTATAACAGAAAAGGGGTTTGCAGCCACTGCTGTGTCATTAGAGAAACAATAA- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100543448 214 - 115148730 TTTTTTTGAACTATACAGT--------CTCTAACACTGAATTCTGATT----TATACCTCCCTCTCATTTCTGATTGAGATCATGGCTCTAAACATACAG-AATGTAAATATGGACTTTTGTGGCAAGGCCTTTTCAAAAGGTT-CAAAATAGTAGTCTATATGCAAAAGAAAAAGTATAACAGAAAAGGGGTTTGCAGCCACTGCTGTGTCATTAGAGAAAAAATAA- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80688691 220 + 95678458 CTTTTTTGAACTGTTCAGTCTCTT--ACTCTAACACTGAATTCTGATT----TATACCTCCCTCTCACTTCTGATGGAGATCATGTCTCTAAACATACAG-AATGTAAATATGGACTTTTGTGGCAAGGCCCTTTCAAAAGGTT-CAAAATAGTAGTCTACATGCAAAAGAAAAAGTATAACAGAAAAGGGGTTTGCAGCTACTGCTGTGTCATTAGAGAAACAATAA- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81114867 220 - 96509753 CTTTTTTGAACTGTTCAGTCTCTT--ACTCTAACACTGAATTCTGATT----TATACCTCCCTCTCACTTCTGATGGAGATCATGTCTCTAAACATACAG-AATGTAAATATGGACTTTTGTGGCAAGGCCCTTTCAAAAGGTT-CAAAATAGTAGTCTACATGCAAAAGAAAAAGTATAACAGAAAAGGGGTTTGCAGCTACTGCTGTGTCATTAGAGAAACAATAA- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76372051 220 + 90941950 CTTTTTTGAACTGTACAGTCTCTT--ACTCTAACGCTGAATTCTGATT----TATAACTCCCTCTCACTTCTGATGGAGATCATGTCTCTAAACATACAG-AATGTAAATATGGACTTTTGTGGCAAGGCCCTTTCAAAAGGTT-CAAAATAGTAgtctacatgcaaaagaaaaagtataacaGAAAAGGGGTTTGCAGCCACTGCTGTGTCATTAGAGAAACAATAA- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18639970 220 + 33263144 CTTTTTTGAACTGTACAGTCTCTT--ACTCCAACACTGAATTCTGATT----TATACCTCCCTCTCACTTCTGATGGAGATCATGTCTCTAAACATACAG-ATTATAAATATGGACTTTTGTGGCAAGGCCCTTTCAAAAGGTT-CAAAATAGTAGTCTACATGCAAAAGAAAAAGAATAACAGAAACGGGGTTTGCAGCCACTGCTGTGTCATTAGAAAAACAATAA- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198344157 213 + 210400635 C-TTTTGAAACTATACAGCCTCTT--ACTCTAACACTGAATTCTGATTTATATATATCTCTCTCTCATTTCTGATTGAGATCATGGCTCTAAAAATACAG-------AATATGGACTTTTGTGGCAAGGCCCTTTCAAAAGCTT-CAAAATAGTAGACTATATGCAAAAGAAAAAG-GTAACAGAAGAGGGGTTTCCAGCCACTGC-ATGTCATTAGAGAAACA--AA- i calJac3.chr1 C 0 C 0 s mm10.chr15 77182050 196 + 104043685 TGTTTCTGAACCGTAGAGTGTGTG--TGTCACCTCCAAGATTCTGGTC----TCCATGACTCTTTCATTCCTTCCTGGGACCTTGGCTCTAAACATACAAAAATGTCAGTGCAGACTGGTCTGGCAAGG-------------TG-CAGAACAGTAACCCATATG---AAGAGTCAGGCTACCAGAAAACAG---------CACTGCTGGGCTACATGAGAAACCACCA- i mm10.chr15 I 118 I 200 s canFam3.chr10 40961652 200 - 69331447 -------------TATAGTCTCTTTCACCCCAGTCCCAGATTCTGATT----TATATCTC---CTCATCCCTGACTGAGATCATGGCTCTAAATATATGG-AATGTAAATACAGACTTACATGGCAAGGTCCCTGCAAAAGGTTATAAAATAGTCATCTATAGGCAAAATG------ATAACAGAAAAGGGCTTTTCAACAAC--CTCTGTCCTAAGACAAGTAAACAA i canFam3.chr10 C 0 C 0 a score=740445.000000 s hg38.chr22_KI270876v1_alt 191178 290 + 263666 ----AATTGGAACGCAGGAGGCCCAGGAGTTTCTATTTA----AAAACAGTCATggttgggcacggtggctcatgc--ttgccatcccagcactttgggaggctgaggcaggcagatcatgaggtcaggagtttgagaccagcctggccaacagagtgaaatcccatctctactaaaaatacaaaaattagctg-----------------------------------aggaggctgaggcaggtgaattgcttgaacccaggaggtggaggctgcagtgagccgagattgcaccactgcactccagcctgggtgacagagctagactccatct s panTro4.chr22 34571515 290 + 49737984 ----AATTGGAACGCAGGAGGCCCAGGAGTTTCTATTTA----AAAACAGTCATggttgggcacggtggctcatgc--ttgccatcccagcactttgggaggccgaggcaggcagatcatgaggtcaggagtttgagaccagcctggccaacagagtgaactcccatctctactaaaaatacaaaaattagctg-----------------------------------aggaggctgaggcaggtgaattgcttgaacccaggaggtggaggctgcagtgagccgagattgcaccactgcactccagcctgggtgacagagctagactccatct i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30990606 282 + 46535552 ----AATTGGAACGCAGGAGGCCCAGGCATTTCTATTTA----AAAACAGTCATggttgggcacggtggctcatgc--ttgccatcccagcactttgggaggccgaggcaggcagatcatgaggtcaggagtttgagaccagcctggccaacagagtgaaatcccatctctactaaaaatacaaaaattagctg-----------------------------------aggaggctgaggcaggagaattgcttgaacccaggaggtggaggttgcagtgagccgagactgtgccatt--------gcctgggcaacagagctagactccatct i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100543662 290 - 115148730 ----AATTGGAACGCAGGAGGCCCAGGAGTTTCTATTTA----AAAACAGTCATggttgggcacggtggctcatgc--ttgccatcccagcactttgggaggccgaggcaggcagatcacgaggtcaggagtttgagaccagcctggccaacagagtgaaatctcagctctactaaaaatacaaaaattagctg-----------------------------------aggaggctgaggcaggagaattgcttgaacccgggaggtggaggttgcagtgagccgagattgcgccactgcactccagcctaggcgacagagctagacttcatct i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80688911 325 + 95678458 ----CATTGGAACGCAGGAGGCCCAGGAGTTTCTATTTA----AAAATGGTAATggttgggcgcggtagttcaagc--ttgcaatcccagcactttgggaggcagaggcaggcagatcacaaggtcaggagttcgcgacccgcctagccaacagagtgaaaccctgtctctactaaaaatacaaaaattagttgggcatggtggcaggtgtctgtaatcccagctactcaggaggctgaggcaggagaactgcttaaactcaggagccggagatatcagtgaactgagagggcgccactgcactccagcctgggcaacacagctagactctgtct i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81115087 325 - 96509753 ----CATTGGAACGCAGGAGGCCCAGGAGTTTCTATTTA----AAAATGGTAATggttgggcgcggtagttcaagc--ttgcaatcccagcactttgggaggcagaggcaggcagatcacaaggtcaggagttcgagaccagcctagccaacagagtgaaaccctgtctctactaaaaatacaaaaattagttgggcatggtggcaggcgtctgtaatcccagctactcgggaggctgaggcaggagaactgcttaaactcaggaggcggagatagcagtgaactgagatggcgccactgcactccagcctgggcaacagagctagactctgtct i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76372271 325 + 90941950 ----CATTGGAACGCAGGAGGCCCAGgagtttctattta----aaaatggtAATGGTTGGGCACGGTAGTTCaagc--ttgcaatcccagcactttgggaggcagaggcaggcagatcacaaggtcaggagttcaagaccagcctagccaacagagtgaaaccctgtctctactaaaaatacaaaaattagttgggcatggtggcaggcgtctgtaatcccagctacacgggaggctgaggcaggagaactgcttaaactcaggaggcggagatagcagtgaactgagatggcgccactgcactccagcctgggcaacagagctagactctgtct i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18640190 325 + 33263144 ----AATTGGAACGCAGGAGGCCCAGGAGTTTCTATTTA----AAAATGGTAATggttgggcgtggtagttcaagc--ttgcaatcccagcactttgggaggcagaggcaggcagatcacaaggtcaggagttcgagaccagcctagccaacagaatgaaaccctgtctctactaaaaatacagaaattagttgggcatggtggcaggcgtctgtaatcccagctactcgggaggctgaggcaggagaactgcttaaactcaggaggcggagatagcagtgaactgagatggcgccactgcactccagcctgggcaacagagctagactctgtct i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198344370 323 + 210400635 ----AATTGGAAGGCAGGAGATCCTGGAGTTTCTGTTTA----AAAACAGTCATggccgggtatggtggctcacacttttataattccagcactttgggaggctgaggcaggtggatcatgaggtcaggagttcgagaccaacctggccaacacaatgaaacactgtctctactaaaaatacaaaaattagctgggcatggtgccaggtgcctataatcccagctactcaggaggctgaggcaggagaatcgcttgaacctgggaagcacaagtttcagtgagccga----gtgccactgcatgctagcctggatgacagagctagactctgtct i calJac3.chr1 C 0 C 0 s canFam3.chr10 40961852 49 - 69331447 AAGTGAATAAAAAACAA------TGGGAGTTTCTGGTTAATGGAGAACTGTAATG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- i canFam3.chr10 C 0 C 0 e mm10.chr15 77182246 200 + 104043685 I a score=1087649.000000 s hg38.chr22_KI270876v1_alt 191468 315 + 263666 caaaacataaataaacaaacaaacaaataaaTAAAAA--GTC--ATGTGATAATC---AAAATA-CACAGAAGTATACTGAAAATATCTGGATCACATTATGAACATCAACTATATTGCAGGAATACTTGCAGACAATATAG---ATTTGGCTTGATTTATATAGAACATATG-CTTTCTGGATAAGTGGCTGATAAAAGCAGGTCTCAAT---TTCCTGCCAA-AACAGTGGGGTATATTATATTTTTAGGTTCTGACTCCCAGTCATTTGAACTTTCAGGATCTGTTTGGAGACAA---CAAGCAGCAGTCTAATGAAC----TATATTCGTTGGA s panTro4.chr22 34571805 317 + 49737984 caaaaCATaaacaaacaaacaaacaaataaataaaAACAGTC--ATGTGATAATC---AAAATA-CACAGAAGTATACTGAAAATATCTGGATCACATTATGAACATCAACTATATTGCAGGAGTACTTGCAGACAATATAG---ATTTGGCTTGATTTATATAGAACATATG-CTTTCTGGATAAGTGGTTGATAAAAGCAGGTCTCAAT---TTCCTGCCAA-AACAGTGGGGTATATTATATTTTTAGGTTCTGACTCCCAGTCATTTGAACTTTCAGGATCTGTTTGGAGACAA---CAAGCAGCAGTCTAATGAAC----TATATTCGTTGGA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30990888 318 + 46535552 caaaaaataaataaacaaacaaacaaacaaaTAAAAA--GTC--ATGTGATAATCAATAAAATA-TACAGAAGTATACTGAAAATATCTGGATCACATTATGAACATCAACTGTACTGCAGGAGTACTTGCAGACAATATAG---ATTTGGCTTGATTTATATAGAACATATG-CTTTCTGGATAAGTGGCTGATAAAAGCAGGTCTCAAT---TTCCTGCCAA-AACAGTGGGGTATATTATATTTTTAGGTTCTGACTCCTAGTCATTTGAACTTTCAGGATCTGTTTGGAGACAA---CGAGCAGCAATCTAATGAAC----TATATTCCTTGGA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100543952 316 - 115148730 caaa----aaataaataaacaaacaaataaataaaAACAGTC--ATGTGATAATCAATAAAATA-CACAGAAGTATACTGAAAATATCTGGATCACATTATGAACATCAACTATATTGCAGAAGTACTTGCAGACAATATAG---ATTTGGCTTGATTTATATAGAACATATG-CTTTCTGGATAAGTGGCTGATAAAAGCAGGTCTCAAT---TTCCTGCCAA-AACAGTGGGGTATACTACATTTTTAGGTTCTGACTCCCAGTCATTTGAACTTTCAGGATCTGTTTGGAGACAA---CAAGCAGCAGTCTAATGAAC----TATATTCCTTGGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80689236 318 + 95678458 caaa----aaataaataaacaaacaaataaataaGAACAGTCATATGTGAGAATCAATAAAATA-CACAGAAGTATACTGAAAATATCTGGATCACATTATGAACATCAACTATATTGCAAGAGTACTTGCAGACAATATAG---ATTTGGCCTGATTTATACAGAACATATG-CTTTCTGGATAAGTGGCTGATAAAAGCAGGTCTCAAT---TTCCTGCCAA-AACAGTGGGGTATATTATATTTTTAGGTTCTGACTCCCAGTCATTTAAACTTTCAAGATCTGTTTGGAGACAA---CAAGCAGCAGTCTAATGAAC----TATATTCCTTGGA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81115412 318 - 96509753 caaa----aaataaataaacaaacaaataaaTAAGAACAGTCATATGTGAGAATCAATAAAATA-CACAGAAGTATACTGAAAATATCTGGATCACATTATGAACATCAACTATATTGCAAGAGTACTTGCAGACAATATAG---ATTTGGCCTGATTTATACAGAACATATG-CTTTCTGGATAAGTGGCTGATAAAAGCAGGTCTCAAT---TTCCTGCCAA-AACAGTGGGGTATATTATATTTTTAGGTTCTGACTCCCAGTCATTTAAACTTTCAAGATCTGTTTGGAGACAA---CAAGCAGCAGTCCAATGAAC----TATATTCCTTGGA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76372596 318 + 90941950 caaa----aaataaataaacaaacaaataaataagaacagtCATATGTGAGAATCAATAAAATA-CACAGAAGTATACTGAAAATATCTGGATCACATTATGAACATCAACTATATTGCAAGAGTACTTGCAGACAATATAG---ATTTGGCCTGATTTATACAGAACATACG-CTTTCTGGATAAGTGGCTGATAAAAGCAGGTCTCAAT---TTCCTGCCAA-AACAGTGGGGTATATTATATTTTTAGGTTCTGACTCCCAGTCATTTGAACTTTCAAGATCTGTTTGGAGACAA---CAAGCAGCAGTCTAATGAAC----TATATTCCTTGGA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18640515 318 + 33263144 caaa----aaataaataaacaaacaaataaaTAAGAACAGTCATATGTGAGAATCAATAAAATA-CACAGAAGTATACTGAAAATATCTGGATCACATTATGAACATCAACTATATTGCAAGAGTACTTGCAGACAATATAG---ATTTGGCCTGATTTATACAGAACATACG-CTTTCTGGATAAGTGGCTGATAAAAGCAGGTCTCAAT---TTCCTGCCAA-AACAGTGGGGTATATTATATTTTTAGGTTCTGACTCCCGGTCATTTGAACTTTCAAGATCTGTTTGGAGACAA---CAAGCAGCAGTCTAATGAAC----CATATTCCTTGGA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198344693 307 + 210400635 caa-----aaataaa---------aaataaataaaaaCAGTCATATGTGAGACTTAATAAAATA-CACAAACGTATATTG-AAATATTTGGATCACATTATGAACATCAACTATATTGCAAGAGTACATGCAGACAATATAG---ATTTGGCTTGATTTACACGGAAAATATG-CTTTGTGGGTAAGTGGCTGATAAAAGCAGGTCTCAAT---TTCCTGTCAA-AACAGTGGGGTATATTCTATTTTTAGGTTCTGACTTCCAGTCATTTGAACTTTCAGGATCTGCTTAGAGACAA---CAAGCAGCAGTCTAATGAAC----TATATTTCTTTGA i calJac3.chr1 C 0 C 0 s mm10.chr15 77182446 299 + 104043685 CAAAACAACAATAAA--AAACAGCAAAGAAAAAAGAAAACCC------GAGGACTTCTAGGTTA--ACTGAGCTGTGCTGTAAACATGAGGCCCTCACTGTGAA-------TATTTTGTGAG---ATGTGCAGCCAGTGTGGGATACATAGCCAGATT--CACAGAGCATATGTCTTCTTCTATAAAGGTTGAAAAAAAATTTTTCCCCATCCCCTCCTTCAAA-AGCAGTGGGGTATATTCT-------GATTCTGACATCTAGTGATTTAAA-TTCTAGGGTCTGTTTAGTGATAATAGCATGCAAGAGT----TAAAC----TGTCTTTGTTTAA i mm10.chr15 I 200 C 0 s canFam3.chr10 40961901 278 - 69331447 ---------------------------------------------CAAGAGGATCAATAGAGTAACACAGAACCATTCTGAAAATATCTGGATCGCATAATGAACATCA---ATACTGCA-GAGTATGTGCACACAATGAAGGATACTTGGCTAGATTTATACGGTACATGC--TTTTCTGGATAAATGGCTGATAAAAGCAGGTCTCAAT---TTCCTCTAAACAATAGTAGGGTATGTTATGTTTTTACACGTTGACTCTGAGTTATTTGAACTTTCAAGATGTGTTTGGAGGCAA---CA---AGGAGTTTAATGAACTATATATATTCTTTTGA i canFam3.chr10 C 0 C 0 a score=319609.000000 s hg38.chr22_KI270876v1_alt 191783 111 + 263666 CTTTTTACTCAGGGATGAG---TAA-AAAATGTCATTTGGTCCACTAACCATTTGTCCATTGAGAAACATGACTACACATGACATGAAATTTAAAGAAAACAATTCACTGGGGCT s panTro4.chr22 34572122 111 + 49737984 CTTTTTACTCAGGGATGAG---TAA-AAACTGTCATTTGGTCCACTAACCATTTGTCCATTGAGAAACATGACTACACATGACATGAAATTTAAAGAAAACGACTCACTGGGGCT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30991206 111 + 46535552 CTTTTTACCCAGGGATGAG---TAA-AAAATGTCATTAGGTCCACTAACCATTTGTCCACTGAGAAACATGACTACACATGACATGAAATTTAAAGAAAACAACTCACTGGGGCT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100544268 111 - 115148730 CATTTTACTCAGGGATGAC---TAA-AAAATGTCATTTGGTCCACTAACCATTTGTCCATTGAGAAACAAGACTATGCATGACATGAAATTTAAAGAAAACAACTCACTGGGGCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80689554 111 + 95678458 CTTTTTACTCAGGGATGAG---TAA-AAAATGTCATTTGGTCCACCAAACATTTGTCCATTGAGAAACATGACTACACATGACATGAAATTTAAAGAAAACAACTCACTGGGGCT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81115730 111 - 96509753 CTTTTTACTCAGGGATGAG---TAA-AAAATGTCATTTGGTCCACCAAACATTTGTCCATTGAGAAACATGACTACACATGACATGAAATTTAAAGAAAACAACTCACTGGGGCT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76372914 111 + 90941950 CTTTTTACTCAGGGATGAG---TAA-AAAATGTCATTTGGTCCACCAAACATTTGTCCATTGAGAAACATGACTACACATgacatgaaatttaaagaaaacaactcaCTGGGGCT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18640833 111 + 33263144 CTTTTTACTCAGGGATGAG---TAA-AAAATGTCATTTGGTCCACCAAACATTTGTCCATTGAGAAACATGACTACACATGACATGAAATTTAAAGAAAACAACTCACTGGGGCT i chlSab2.chr19 C 0 C 0 s mm10.chr15 77182745 98 + 104043685 CTTTATGTGCAAAAATGAGTTTTAA-AATACA-AATCTAGTGTACTTACCA---ATACGCTG----GCACAACTATACAGAACATGAAATTTAAGGAAAACAGTTCA-------- i mm10.chr15 C 0 C 0 s canFam3.chr10 40962179 103 - 69331447 CTTTTTATTCAGAGATGCA---TAAGGAAACATGATTTAGTTCACTTACCA---ATACAACGAGAGATACGGCTACAGAGAATATGAAATGCAAAGAAAACAATTCACA------ i canFam3.chr10 C 0 C 0 e calJac3.chr1 198345000 0 + 210400635 C a score=2575764.000000 s hg38.chr22_KI270876v1_alt 191894 715 + 263666 CTCAATGTATTCTGGATTGCCTCTG-TATTATTTTAAA--------ATCTTTGCCACATTAGAATTAGCACCATATCCACACTCCCCTCATTTTTCTTGCTTCCATTTAGTTCTATACTTTTGAAACTGCCCACTTAAAAGGTTTA---CTCTTGTCCTTGCTTCTTCATGCCAGCTGGCTCCTACTCAGCAGTATCCTGG----GTTGGTATGTTGGCTACCACCCTTGAAAGATATTCTAAAAGGTCACTA-TTTTCATTTATGCTAATTACCTGGGGAGAGACAGATGAATGGAAAC-GCAAC-TTTGACAGTGCATAAACA-TGTTTCCAAGACCTATGCTCT-AAAATATTATATAATCGGGTTTTCCCAAGTAATGTGTACTCTATGGTTGGAGGAAAGGGGAACAAAAGAAAT-GTGAAGGTGAGAGAAGGGAATAGAGG-AAACTAGGAAGCTCTGATGGTCCGAAGCAGAAGGAAAGGCATTCTGAAAAACAGTTCAGAGGAGCTTCAGACT--GCATAACCTCAATATGCAACAATGGAAATACAGGGAAATGGTGAAGTCCTGGGTAC-AGAAATTATGAAACTAAAATAAAGGCTGTTCAAGGTAGAAACTGGGAAAAGACTTATTATGTGCTGCAGATGGAGGTCAAGATCCAAATGGTCAGGTCTTAAGAATATATCAGACTAGCTTAATCTGAGCTG-TTCTTATTCAAGGGCTTTGGTGTAAGATG s panTro4.chr22 34572233 715 + 49737984 CTCAATGTATTCTGGATTGCCTCTG-TATTATTTTAAA--------ATCTTTGCCACATTAGAATCAGCACCATATCCCCACTCCCCTCATTTTTCTTGCTTCCATTTAGTTCTATACTTTTGAAACTGCCCACTTAAAAGGTTTA---CTCTTGTCCTTGCTTCTTCATGCCAGCTGGCTCCTACTCAGCAGTATCCTGG----GTTGGTATGTTGGCTACCTCCCTTGAAAGATATTCTAAAAGGTCACTA-TTTTCATTTGTGCTAATTACCTGGGGAGAGACAGATGAATGGAAAC-GAAAC-TTTGACAGTGCATAAACA-TGTTTCCAAGACCTATGCTCT-AAAATATTATATAATCGGGTTTTCCCAAGTAATGTGTACTCCATGGTTGGAGGAAAGGGGAACAAAATAAAT-GTGAAGGTGAGAGAAAGGAATAGAGG-AAACTAGGAAGCTCTGATGGTCCGATGCAGAAGGAAAGGCATTCTGAAAAACAGTTCAGAGGAGCTTCAGACT--GCATAACCTCAATATGCAACAATAGAAATACAGGGAAATGGTGAAGTCCTGGGTAC-AGAAATTATGAAACTAAAATAAAGGCTGTTCAAGGTAGAAACTGGGAAAAGACTTATTATGTGCTGCAGATGGAGGTCAAGATCCAAATGGTCAGGTCTTAAGAATATATCAGACTAGCTTAATCTGAGCTG-TTCTTATTCAAGGGCTTTGGTGTAAGATG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30991317 712 + 46535552 CTCAATGTATTCTGGATTACCTTTG-TATTATTTTAAA--------ATCTTCGCCACATTAGAATCAGCACCATATCCCCACTCCCCTCATTTTTCTTGCTTCCATTTAGTTCTATACTTCTGAAACGGCCCACTTTAAAGGTTTA---CTCTTGTCCTTGCTTCTTCATGCCAGCTGGCTCCTACTCAGCAGTATCCTGG----GTTGGTATGTTGGCTACCTCCCTTGAAAGATATTCTAAAAGGTCACTA-TTTTCATTTCTGCTAACTACCTGGGGAGAGACAGATGAATGGAAAC-TGAAC-TTTGACAGTGCATAAACA-TGTTTCCAAGACCTACACTCT-AAAATATTATATAATCAGGTTTTCCCAAGTAATGTGCACTCTATGGTTGGAGGAAAAGGGAACAAAAGAAAT-GTGAAGGTGAGAGAAGGGAATAGAGA-AAACTAGGAAGCTCTGAAGGTCCGATGCAGAAGGAAAGGCATTCTG---AACAGTTCAGAGGAGCTTCAGACT--GCATAACCTCAATATGCAACAATGGAAATACAGGGAAATGGTGAAGTCCTGGGCAC-AGAAATTATGAAACTAAAATAAAGGCTGGTCAAGGTAGAAACTGTGAAAACACATATTATGTGCTGCAGATGGAGGTCAAGATCCAAATGGTCAGGTCTTAAGAATATATCAGACTAGCTTAATCTGAGCTG-TTCTTATTCAAGGGCTTTGGTGTAAGATG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100544379 717 - 115148730 CTCAATGTATTCTGGATTGCCTTTG-TATTATTTTAAA--------ATCTTTGCCACATTAGAATCAGCACCATATCCCCACTCCCCTCATTTTTCTTGCTTCCATTTAGTTCTATACTTTTGAAACTGCCCACTTTAAAGGTTTA---CTCTTGTCCTTGCTTCTTCATGCCAGCTGGCTCCTACTCAGCAGTATCCTGG----GTTGGTATGTTGGCTACCTCCCTTGAAAGATATTCTAAAAGGTCACTA-TTTTCATTTGTGCTAATTACCTGGGGAGAGACAGATGAATGGAAAC-TGAACTTTTGACAGTGCATAAACA-TGTTTCCAAGACCTATGCTCTAAAAAAATTATATAATCGGGTTTTCCCAAGTAATGTGTACTCTATGGTTGGAGGAAAGGGGAACAAAAGAAAT-GTGAAGGTGAGAGAAGGGAATAGAGA-AAACTAGGAAGCTCTGAAGGTCCAATGCAGAAGGAAAGGCTTTCTGAACAACAGTTCAAAGGAGCTTCAGACT--GCATAACCTCAATATGCAACAGTGGAAACACAGGGAAATGGTGAAGTCCTGGGCAC-AGAAATTATGAAACTAAAATAAAGGCTGATCAAGGTAGAAACTGGGAAAAGACTTATTCTGTGCTGCAGATGGAGGTCAAGACCCAAATGGTCAGGTCTTAAGAATATATCAGACTAGCTTAATCTGAGCTG-TTCTTATTCAAGGGCTTTGGTGTAAGATG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80689665 709 + 95678458 CTCAATGTATTCCAGATTGCCTTTG-TATTATTTTAAA--------ATCTTTGCCACATTAGAATCAGCGCCACATCCCCACTCCCCTCGCTTTTCTTGCTTCCATTTAGTTCCACACTTTTGAAACTGCCCACTTTAAAGGTTTA---CTCTTGTCCTTGCTTCTTCATGCCAGCTGGCTCCTACTCAGCAATATCCTGG----GTTGGTATGTTGGCTACCTCCCTTGAAAGATATTCTAAAAGGTCACCA-TTTTCATTTGTGCTAATTACCTGGGGAGAGACAGATGAACGGAAAC-TAAAC-TTTGACAGTGCATAACCA-TGTTTCCAAGACCTACGCTCT-AAAA---TGCATAACCGGGTTTTCCCAAGTAATATGTACTCTATGGTCGGAGGAAAGGGGAACAAAAGAAAT-GTGAAGGTAAGAGAAGGGAATAGAGA-AAACTAGGAAGCTCTGAAGGTCCGAGGCAGAAGGTAAGGCATTCTGAACAACAGTTCAGAGGAGCTTCAGACT--GCATAACCTCAACATGCAACAATGGAAATACAGGGAAATGGTGAAGTCTTGGGCAC-AGAAATTATGAAACTAAAATAAACGCTGGTCAAGGAAGAAACTGGGAAAAGACATA---GGTGCTGCAGATGGAGGTCAAGATCCAAGTGGTCAGGTCTTAAGAATATATCAGACTAGCTTAATCTGAGCTG-TTCTTAATCAAGGGCTTTGGTGTAAGATG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81115841 709 - 96509753 CTCAATGTATTCCAGATTGCCTTTG-TATTATTTTAAA--------ATCTTTGCCACATTAGAATCAGCGCCACATCCCCACTCCCCTCGCTTTTCTTGCTTCCATTTAGTTCCACACTTTTGAAACTGCCCACTTTAAAGGTTTA---CTCTTGTCCTTGCTTCTTCATGCCAGCTGGCTCCTACTCAGCAATATCCTGG----GTTGGTATGTTGGCTACCTCCCTTGAAAGATATTCTAAAAGGTCACCA-TTTTCATTTGTGCTAATTACCTGGGGAGAGACAGATGAACGGAAAC-TAAAC-TTTGACAGTGCATAACCA-TGTTTCCAAGACCTACGCTCT-AAAA---TGCATAACCGGGTTTTCCCAAGTAATATGTACTCTATGGTTGGAGGAAAGGGGAACAAAAGAAAT-GTGAAGGTAAGAGAAGGGAATAGAGA-AAACTAGGAAGCTCTGAAGGTCCGAGGCAGAAGGTAAGGCATTCTGAACAACAGTTCAGAGGAGCTTCAGACT--GCATAACCTCAACATGCAACAATGGAAATACAGGGAAATGGTGAAGTCTTGGGCAC-AGAAATTATGAAACTAAAATAAACGCTGGTCAAGGAAGAAACTGGGAAAAGACATA---GGTGCTGCAGATGGAGGTCAAGATCCAAGTGGTCAGGTCTTAAGAATATATCAGACTAGCTTAATCTGAGCTG-TTCTTAATCAAGGGCTTTGGTGTAAGATG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76373025 710 + 90941950 CTCAATGTATTCCAGATTGCCTTTG-TATTACTTTAAA--------ATCTTTGCCACATTAGAATCAGCACCACATCCCCACTCCCCTCGCTTTTCTTGCTTCCATTTAGTTCCATACTTTTGAAACTGCCCACTTTAAAGGTTTA---CTCTTGTCCTTGCTTCTTCATGCCAGCTGGCTCCTACTCAGCAATATCCTGG----GTTGGTATGTTGGCTACCTCCCTTGAAAGATATTCTAAAAGGTCACCA-TTTTCATTTGTGCTAATTACCTGGGGAGAGACAGATGAAGGGAAAC-TAAAC-TTTGACAGTGCATAAACATTGTTTCCAAGACCTACGCTCT-AAAA---TGCATAACCGGGTTTTCCCAAGTAATATGTACTCTATGGTCGGAGGAAAGGGGAACAAAAGAAAT-GTGAAGGTAAGAGAAGGGAATAGAGA-AAACTAGGAAGCTCTGAAGGTCCGAGGCAGAAGGCAAGGCATTCTGAACAACAGTTCAGAGGAGCTTCAGACT--GCATAACCTCAACATGCAACAATGGAAATACAGGGAAATGGTGAAGTCTTGGGCAC-AGAAATTATGAAACTAAAATAAACGCTGGTCAAGGAAGAAACTGGGAAAAGACATA---GGTGCTGCAGATGGAGGTCAAGATCCAAGTGGTCAGGTCTTAAGAATATATCAGACTAGCTTAATCTGAGCTG-TTCTTAATCAAGGGTTTTGGTGTAAGATG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18640944 709 + 33263144 CTCAATGTATTCCGGATTGCCTTTG-TATTATTTTAAA--------ATCTTTGCCACATTAGAATCAGCACCACATCCCCACTCCCCTCGCTTTTCTTGCTTCCATTTAGTTCCATACTTTTGAAACTGCCCACTTTAAAGGTTTA---CTCTTGTCCTTGCTTCTTCATGCCAGCTGGCTCCTACTCAGCAGTATCCTGG----GTTGGTATGTTGGCTACCTCCCTTGAAAGATATTCTAAAAGGTCACCA-TTTTCATTTGTGCTAATAACCTGGGGAGAGACAGATGAAGGGAAAC-TAAAC-TTTGACAGTGCATAAACA-TGTTTCCAAGACCTACGCTCT-AAAA---TACATAACCGGGTTTTCCCAAGTAATATGTACTCTATGGTCGGAGGAAAGGGGAACAAAAGAAAT-GTGAAGGTAAGAGAAGGGAACAGAGA-AAACTAGGAAGCTCTGAAGGTCCGAGGCAGAAGACAAGGCATTCTGAACAACAGTTCAGGGGAGCTTCAGACT--GCATAACCTCAACATGCAACAATGGAAATACAGGGAAATGGTGAAGTCTTGGGCAC-AGAAATTATGAAACTAAAATAAACGCTGGTCAAGGAAGAAACTGGGAAAAGACATA---GGTGCTGCAGATGGAGGTCAAGATCCAAGTGGTCAGGTCTTAAGAATATATCAGACTAGCTTAATCTGAGCTG-TTCTTAATCAAGGGCTTTGGTTTAAGATG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198345000 708 + 210400635 CTCAATGTACTCTGGATTGCCTTTG-TATCATTGTAAA--------ATCTTTGCCACATCAGAATCAGCACCACGTCCCCAACTCCCTTATTTTTCTGGCTTCCATTTAGTTTCATATTTTTGAAACTGCCCACTTTAAGGGTTTA---CTCTTATTCTTGCTTCTTCATGCCAGCTGGCTCCTACTCAGCAGTATCCTGG----GTTGGTATGTTGGCTAATTCCCCTGAAAGATATTCTAAAAGGTCACTA-TTTTCATTTGTGCTAATTACCTGGGGAGAGACAGATGAAGGGAAACTTGCAC-CTTGACAGTGCATAAACA-TGTTCCCAAGACCCACGCTCT-AAAATATGATATAACTGGGTTTTCCCAATTAATGTGTATTCAATGGTTGGAGGAAAGGAGAATAAAAGAAAT-GTGAAGGTGAGCGAAGGGAGTAAAGA-AAACTAGGAAGTTCTGAAGGTCTGACGCAGAAGGAAAGGCATTCTG---AACAGTTCAGAAGAGCTTCAGACT--GTATGACCTCATTATGCAACAATGGAAATACAGGGAAATGGCGAAGTCCTGGGCAA-AGCAATTATGAAACTAAAATAAAGTCTGGTCAAGGTAGAAACTGGG--AAGACTGT---TGTGCTACAGATGGACGTCAAGATCCCAATGATCAGATCTTAGGAATATATCAGACTAGCTTAATCTGGCCTG-TTCTTATTCAAGGGCTTTGGTATAAGATG i calJac3.chr1 C 0 C 0 s mm10.chr15 77182843 615 + 104043685 TTCAATGTTTTT-------------------------A--------ACCCTTTCAACGCTAAGG--AACAACACACTTCTGGGCATC----CTTTATTGCTTCCAT----------ACTTTTGAAATTGCTCCTGTTAAAGGCTCA---CACTTCCCATTCTTACTTCATG-TAGCTGGCTTCC-CTCCAAAGTCTCCTGGGGGAGCTGGCACAGTGGCTGCCGCCCTTGAAAGAGGTTTCAAAAGGTCACTA-TATTCAATTGTGCTAATTACCT--GGAGGCATGGGTGAA-GAAAGG-AGAAC--------------------AGTTTCCAATG-CTACACTCC-AAAA-----TATGCCTGGGTTTCTCCAAATACCGTGTACTGTGTAGGTAGCCAGGGTAGAAAAAACCGAAGTCGTGAAAACCAGAGATGGGA--------AAAGCAGGCAACTGTACAAGTCCAA-GCAGAGGGGGAATCGCTCGTCCCACCA----AGAGTAGCTTCTGAC-----------------TGCAACAATGG-AATATAGGAAAATG--AAAACTGTGGGAGC-AAGAGCTGTAACAGTGAAATAAAGGCTAGGCAAAGAAGAAACTGAAGACAAACTGC---TCTTCCACAGAGAGAAGCGGAGATCCAAATGTGCAAGCCTTAGGG----ATCAAACTAGCCTCATCCGGGCTGCTCCTTCTTTAAAAAGTTCAGTGTGTGGTg i mm10.chr15 C 0 I 1711 s canFam3.chr10 40962282 692 - 69331447 CCCACTGTATTCTGGACTGCCtttattattattaaaaaatatatgtattttttCCACATTAGAGTCAGCACCACTTCCCCGA-CCCCTTGCTTGTCTTGCTTCCAT-CAGTTC---------AAAACTGTTAATTTTAAAGGTTTGTTCTTCTTGCTCTTGCTTCTTCATGCCAGTTGGCTTCCACTCAACAGTATCATGGGGGAGTTGGTATGCT-GCTACCTCCCTTGAAAGCTATTCTAAAAGGTCACTATTTTTCATTTGTGTTAAGTACCTGGGGAGAGATAGATGAAGGGAAAC-TAAAC-TTTGGCAGTGCATAAACA-TGTTTCCAAGATCCATGCTTT-AAAG-----TATCACTGGGTTTCCTTAAGTAATGTGTGTTGCATGGCTAAAGGAGAGCGGAACAATAGAAAT-GTGAATGTAAGATAAGGAAATAAAAACAAGGAAGGAAGCTGTGAAGGCCCAGTGCAGAAG--------TTCTGAGGAGCAGTTAAGTGGAGCTCCAGATTGAGCGTAACATTGGCAGGCAACAATGAAAACACA-GATGATGGCAAAGTCCTGGGAGCAAGGAGTTTTTCAACTGAAATAAAGACTGATCAAGGTGGAGATTGGGAAAAGACTAA---CCTCCTCCAGGAAGAGGTCAAGATCCAAATGATCAAGTATTAATGA---------------TAATCTGAGCTG-TTCTTAGTCAAGGGGTTCAGTGTGACAGC i canFam3.chr10 C 0 C 0 a score=280706.000000 s hg38.chr22_KI270876v1_alt 192609 81 + 263666 ACAAGGCATGGTCTCACTTTTCCTAGCCACATGGAAAGGAATACCATCAAACTCAAAGC---AAAAAAGGAATTGGGATCCAGT s panTro4.chr22 34572948 81 + 49737984 ACAAGGAATGGTCTCACTTTTCCTAGCCACATGGAAAGGAATACCGTCAAACTCAAAGC---AAAAAAGGAATTGGGATCCAGT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30992029 84 + 46535552 ACAAGTCATGGTCTCACTTTTCTTAGCCACATGGAAAGGAATACCATCAAACTCAAAGCAAGAAAAAAGGAATTGGGATCCAGT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100545096 84 - 115148730 ACAAGGCATGGTCTCACTTTTCCTAGCCACATGGAAAGGAATACCATCAAACTCAAAGCAAGAAAAAAGGAATTGGGATCCAGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80690374 84 + 95678458 ACAAGGCATGGTCTCACTTTTCCTAGCCACATGGGAAGGAATACTCTCACACTCGAAGCAAGAAAAAAGGAACTGGGATCCAGT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81116550 84 - 96509753 ACAAGGCATGGTCTCACTTTTCCTAGCCACATGGGAAGGAATACTCTCACACTCGAAGCAAGAAAAAAGGAACTGGGATCCAGT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76373735 84 + 90941950 ACAAGGCATGGTCTCACTTTTCCTAGCCACATGGGAAGGAATACCCTCAAACTCGAAGCAAGAAAAAAGGAACTGGGATCCAGT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18641653 84 + 33263144 ACAAGGCATGGTCTCACTTTTCCTAGCCACATGGGAAGGAATACCCTCAAACTCGAAGCAAGAAAAAAGGAACTGGGATCCAGT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198345708 84 + 210400635 ACAAGGCATGGTTTCACTTTTCCTAGCCACATAGAAAGGAAAACCAACAAACTCAAAGCAAGAAAAAAGGAATTGGGATCCAAT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40962974 83 - 69331447 ACAAGGCAAAATCTGAC-TATCCTAGTCCCACAGAAAGGAACACCATCAAACTCTATTCAAGAAAAAGAAAATCCAGATCCAAT i canFam3.chr10 C 0 I 107 e mm10.chr15 77183458 1711 + 104043685 I a score=1671423.000000 s hg38.chr22_KI270876v1_alt 192690 491 + 263666 AAGCTC--------------------------------------------------------------------------------------------AAAAGAGGCACTGACAAAAAATGGCTGAGG------------------------GTTCAGAGTTGGCT-CAGGTTCCAAGAGAAACTAGAGTGCCACCATGCACCAAGGCAAGAAGACCAGGTGAGTAGACTAGCCAATTTAATAAGGGTAATGTTTAACCCCTGGTACATGGGTAATGAGGTATCGAATTATTTGAAAAACCAGCTGACTACTGGCGAGGCAAGCTCCTTAACATAAGGTCAGATTAAACTCTC-TAATTTAGAGCACAGAGATTCAAATTTGTAAAACCTCTGTATCCATAGCTGGGCAGGGCAAGGGTAGGCAAAGAATGACAATTTTAAGCAAGATGAT--GCTAGAGTTCAAATCAGTTCAGCATCTAC--CAAAT----CCTGACAAGTAAGTGCCCAGCACTGTACCAAGTG----------------------CTGCCTTTGAAGAGTTTACAT----AGCTAGAATGGCCTGTCCATTAC---------TGGGGTTGCTCTTAGAATTCGACATGTTAATGACTGTAAAATGCTT s panTro4.chr22 34573029 491 + 49737984 AAGCTC--------------------------------------------------------------------------------------------AAAAGAGGCACTGACAAAAAATGGCTGAGG------------------------GTTCAGAGTTGGCT-CAGGTTCCAAGAGAAACTAGAGTGCCACCATGCACCAAGGCAAGAAGACCAGGTGAGTAGACTAGCCAATTTAATAAGGGTAATGTTTAACCCCTGGTACATGGGTAATGAGGCATCAAATTATTTGAAAAACCAGCTGACTACTGGCGAGGCAAGCTCCTTAACATAAGGTCAGATTAAACTCTC-TAATTTAGAGCAGAGAGATTCGAATTTGTAAAACCTCTGTATCCATAGTTGGGCAGGGCAAGGGTAGGCAAAGAATGACAATTTTAAGCAAGATGAT--GCTAGAGTTCAAATCAGTTCAGCATCTAC--CAAAT----CCTGACAAGTAAGTGTCCAGCACTGTACTAAGTG----------------------CTACCTTTGAAGAGTTTATAT----AGCTAGAATGGCCTGTCCATTAC---------TGGGGTTGCTCTTAGAATTTGACATGTTAATGACAGTAAAATGCTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30992113 486 + 46535552 AAGCTC--------------------------------------------------------------------------------------------AAAAGAGGCACTAATAAAAAATGGCTGAGG------------------------GTTCAGAGTTGGCT-CAGGTTCCAAGAGAAACTAGAGTGCCACCACGCACCAAAGCAAGAAGACCAGGTGAGTAGACTAGCCAATTTAATAAGGGTAATGTTTAACCCCTGGCACATGGTTAATGAGGCATCAAATTATTTGAAAAACCAGCTGACTACTGGCGAGGCAAGCTCCTTAACATAAGGTCAGATTAAACTCTC-TAATTTAGAGCAGAGAGATTCGAATTTGTAAAACCTCTGTATCCATAGCTGGGCAGGGCAAGGGTAGGCAGAGAATGACAATTTTAAGCAAGATGAT--GCTAGAGTTCAAATCAATTCAACATCTAC--CAAAT----CCTGAC----AAGTGTCCAGCACTGTACTAAGTG----------------------CTGCCATTGAAGAGTTTACAT----AGCTAGAATGGCCTGTCCATTAC---------T-gggttgctcttagaactcgacatgttaatgactgtaaaatgctt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100545180 487 - 115148730 AAGCTC--------------------------------------------------------------------------------------------AAAAGAGGCACTGACAAAAAATAGCGGAGG------------------------GTTCAGAGTTGGCT-CAGGTTCCAAGAGAAACTAGAGTGCCACCATGCACCAAGGCAAGAAGACCAGGTGAGTAGACTAGCCAATTTAATAAGGGTAATGTTTAACCCCTGGCACATGGGTAATGAGGCATCAAGTTATTTGAAAAACCAGCTGACTACTGGCGAGGCAAGCTCCTTAACATAAGGTCAGATTAAACTCTC-TAATTTAGAGCAGCGAGATTCGAATTTGTAAAACCTCTGTATCCATAGCTGGGCAGGGCAAGGGTAGGCAGAGAAGGACAATTTTAAGCAAGATGAT--GCTAGAGTTCAAATCAGCTCAACATCTAC--CAAAT----CCTGAC----AAGTGTCCAGCACTGTACTAAATG----------------------CTGCCTCTGAAGAGTTTACGT----AGCTAGAATGGCCTGTCCATTAC---------TGGGGTTGCTCTTAGAATTTGACATGTTAATGACAGTAAAATGCTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80690458 511 + 95678458 AAGCTC--------------------------------------------------------------------------------------------AAAAGAGGCACTGGCAAAAAATGGCCGAGGGAGTCCTTTGTTAGCTGAATTGGAGTTCAGAGTTGGCT-CAGGTTCCAAGAGAAACTAGAGTGCCACCACGCACCATGGCAAGAAGACCAGGTGAGTAGACTAGGCAATCTAATAAGGGTAATGTTTAATCCCTGGCACATGGGTAATGAGGCATAAAATTATTTGAAAAACCAGGTGACTACTGGGGAGGCAAGCTCCTTAACATAAGGTCAGA-TAAACTCTCTTAATTCAGAGCAGAGAGATTCAAATTTGTAAAACCTCTGTATCCATAGCTGGGCAGGGCAAGGGTAGGCAGAGAATGACAATTTTAAGCAAGATGAT--GCTAGAGTTCAAATCAGTTCAACGTCCAC--CAAAT----CCTGAC----AAGTGTCCAGCACTGTACTAAGTG----------------------CTGCCTTTGAAGAGTTTACAT----AGCTAGAATGGCTTGTCCATTAG---------TGGGGTTGCTCTTAGAATTTGACATGTTAATGACTGTAAAATGCTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81116634 511 - 96509753 AAGCTC--------------------------------------------------------------------------------------------AAAAGAGGCACTGGCAAAAAATGGCCGAGGGAGTCCTTTGTTAGCTGAATTGGAGTTCAGAGTTGGCT-CAGGTTCCAAGAGAAACTAGAGTGCCACCACGCACCATGGCAAGAAGACCAGGTGAGTAGACTAGGCAATCTAATAAGGGTAATGTTTAATCCCTGGCACATGGGTAATGAGGCATAAAATTATTTGAAAAACCAGGTGACTACTGGGGAGGCAAGCTCCTTAACATAAGGTCAGA-TAAACTCTCTTAATTCAGAGCAGAGAGATTCAAATTTGTAAAACCTCTGTATCCATAGCTGGGCAGGGCAAGGGTAGGCAGAGAATGACAATTTTAAGCAAGATGAT--GCTAGAGTTCAAATCAGTTCAACGTCCAC--CAAAT----CCTGAC----AAGTGTCCAGCACTGTACTAAGTG----------------------CTGCCTTTGAAGAGTTTACAT----AGCTAGAATGGCTTGTCCATTAG---------TGGGGTTGCTCTTAGAATTTGACATGTTAATGACTGTAAAATGCTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76373819 511 + 90941950 AAGCTC--------------------------------------------------------------------------------------------AAAAGAGGCACTGGCAAAAAATGGCTGAGGGAGTCCTTTGTTAATTGAATTGGGGTTCAGAGTTGGCT-CAGGTTCCAAGAGAAACTAGAGTGCCACCACGCACCACGGCAAGAAGACCAGGTGAGTAGACTAGCCAATCTAATAAGGGTAATGTTTAATCCCTGGCACATGGGTAATGAggcataaaattatttgaaaaaccaGGTGACTACTGGGGAGGCAAGCTCCTTAACATAAGGTCAGA-TAAACTCTCTTAATTCAGAGCAGAGAGATTCAAATTTGTAACACCTCTGTATCCATAGCTGGGCAGGGCAAGGGTAGGCAGAGAATGACAATTTTAAGCAAGATGAT--GCTAGAGTTCAAATCAGTTCAACGTCCAC--CAAAT----CCTGAC----AAGTGTCCAGCACTGTACTAAGTG----------------------CTGCCTTTGAAGAGTTTACAT----AGCTAGAATGGCTTGTCCATTAG---------TGGGGTTGCTCTTGGAATTTGACATGCTAATGACTGTAAAATGCTT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18641737 509 + 33263144 AAGCTC--------------------------------------------------------------------------------------------AAAAGAGGCACTGGCAAAAAATGGCTGAGGGAGTCCTTTGTTAACTGAATTGGGGTTCAGAGTTGGCT-CAGGTTCCAAGAGAAACT--AGTGCCACCATGCACCACGGCAAGAAGACCAGGTGAGTAGACTAGCCAATCTAATAAGGGTAATGTTTAATCCCTGGCACATGGGTAATGAGGCATAAAATTATTTGAAAAACCAGGTGACTACTGGGGAGGCAAGCTCCTTAACATAAGGTCAGA-TAAACTCTCTTAATTCAGAGCAGAGAGATTCAAATTTGTAAAACCTCTGTATCCATAGCTGGGCAGGGCAAGGGTAGACAGAGAATGACAATTTTAAGCAAGATGAT--GCTAGAGTTCAAATCAGTTCAACGTCCAC--CAAAT----CCTGAC----AAGTGTCCAGCACTGTACTAAGCG----------------------CTGTCTTTGAAGAGTTTACAT----AGCTAGAATGGCCTGTCCATTAG---------TGGGGTTGCTCTTAGAATTTGACATGTTAATGACTGTAAAATGCTT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198345792 512 + 210400635 AAGCTC--------------------------------------------------------------------------------------------AGAAAAGACACTGGCAAAAAATGGCTGAGGGAGTCCTTTGTTAACTGAATTGG-GTTCAGAGTTGGCT-CAGGTTCCAAGAAAAACTAGAGCGCCACCATGCACCAAGGCAAGAGGACCAAGCGAGTAGACTAGCCAATCTAATAAGGGTAATGTTTAGTCCCCGGCACATGGGTAATGAGGCATCAAATTATTTGAAGACACAGCTAACTACTAGGGAGGAAAGCTCCTTAACATAAGGTCAGATTAAACTCTC-TAATTCAGAGCAGAGAGACTAGAATTTGTAAAACCTTTGTATCCACAGCTGGGCAGGGAAAGGGTAGGCAGAGAATGACAATTTTAAGCAAGATGCT--GCTAGAGTTCAAATCAGTTCAACATCTACTTCAAAT----CCTGAC----AAGTGTCTAGCACTATACTAAGTG----------------------CTGCCTTTGAAGAGTTTACAG----AGCTAGAATGGCATGTCCATTAC---------TGAGGTTGCTCTTAGAATTTGACATGTTAATGACTGTAAAATGCCT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40963164 640 - 69331447 aggctccccatgaggagcctgcttctccctctgtctgtgtctctgcctctctctcggtgtctctcatgaataaatataaataaaaacccttaaaaaaaaAAAAAGTCACCAGCAAGAAATGGTTGAGTGATTCCTTAGTGAACTGAAAGGGGATTCAGTGTTGGGTACCGGTCTCAAGGAAAACTAGAGTGCCACCACACACCAGAACAAAAAGACCAGGCAAGGAGACCAGCCAATCTAATAAGAGTAATGTTTAACCTCTGGCACATGAGTAATGAGGTACCAG---ATTTAAAGACCATGCTAACTAGTGGAAAAGT-AGCTCCTTAACATAAGATCAGATTAAGCTTTC-TAATTCAGAATAGAGAAA-TGAACTTTACATGCTTACTGTATCCATTGCTAGGCAGGGCAGGAGCAGACAGAGACCGACAATTTTGAGCAAGATGGTACACTGGAGTTCAAATCAGTTCaacatctac--taatgagtacctgat----agatgttcagcaatgtgctgagtgctgggACATTGAGAATTCATCCCTGATTTGAAAGAATTTATAGAAGAAACTAGAGTAGCCTGTCCATGACCacttaccatagggctgatatccagatttgatgtattaatgactgtaaaatgttt i canFam3.chr10 I 107 C 0 e mm10.chr15 77183458 1711 + 104043685 I a score=2284883.000000 s hg38.chr22_KI270876v1_alt 193181 785 + 263666 GGTATtgaaacaggaaaggttctcttgttccccctt----------------------------gcttcttcagtgccccgttgctcaaa-------------------------------cctctaggggagtatatagacgggcaggctgtggggctccgaccccatgacagtgtctaggggtgagagtttacagctcctgaagccccagtgggcatgtgttatagggtgctcttttagtttgccgtctataggcgacttgtgttaatcagctcaatcagaccctctaccttgttgcaaggacagagggctttctgtatcccgggttcttgctttggtgtaccagaagaattggatcatacgtggacttggacaatgagtgcaaagttttattgagtggaaggatttttccaccaatgtgggagccagaagggagatggtttagccctagagttcggctgctcagtggcctcggctctcctccgactgccccagccaaactccgccttgtcccacccgtcaatggcctgccagggtgctgacgtctgtcggtgtgctcttctgccggcttgctcccttgacgtcctcccaccatccagctgcttgtatcttcttcagctggtgttcgtctcttgacatctggctgcctgtatgtctgcccgctagggtctcgggtttttataggcccaggat-ggggggcatggcaggccaggatggtcttgaaaaatgcaacacttgggcatgaaagctggagtgcctctactcacctaggtccataggagtggagccctagccaggggtcacctttctctatccagcacttccctgaccccctcccg--tagc s panTro4.chr22 34573520 784 + 49737984 GGTATtgaaacaggaaaggttctcttg-tccccctt----------------------------gcttcttcagtgccccgttgctcaaa-------------------------------cctctaggggagtatatagacgggcaggctgtggggctccgaccccatgacagtgtctaggggtgagtgtttacagctcctgaagccccagtgggcatgtgttatagggtgctcttttagtttgccgtctataggcgacttgtgttaatcagctcaattagaccctctaccttgttgcaaggacagagggctttctgtatccccggttcttgctttggtgtaccagaagaattggatcatacgtggacttggagaatgagtgcaaagttttattgagtggaaggatttttccaccaatgtgggagccagaagggagatggtttagccctagagttcggttgctcagtggcctcggctctcctccaactgccccagccaaactccgccttgtcccacccgtcaatggtctgccagggtgctgacgtctgtcggtgtgctcttctgccggcttgctcccttgacgtcctcccaccatccagctgcttgtatcttcttctgctggtgttcgtctcttgacatctggctgcctgtatgtctgcccgctagggtctcgggtttttataggcctaggat-gggggacatggcaggccaggatggtcttgaaaaatgcaacacttgggcatgaaagctggagtgcctctactcacctaggtccataggagtggagccctagccaggggtcgcctttctctatccagcacttccctgaccccctcccg--tagc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30992599 784 + 46535552 ggtattgaaacaggaaaagttctcttg-tccccctc----------------------------gcttcttcagtgccccattgctcaaa-------------------------------cctctagcggagtatacagacgggcagattgtggggctctgaccccatgacagtgtctaggggtgagtgtttacagctcctgaagacccagtgggcaggtgttatagggtgctcttttagtttgccgtctataggcggcttgtgttaaccagcccaattagaccctctaccttgttgcaaggacagagggctttctgtatcccagattcttgccctggtgtaccagaagaattggatcatacgtggacttggagaatgagtgcaaagttttattgagtggaaggatttttctgccaatgtgggagccagaagggagatggtttagccctagagtttggcagctcagtggccttggctctcctccgactgccccagccaaactccgccttgtcccaccagtcaatggcctgccagggtgctgacgtctgttggtgtgctcttctgccggcttgctcccttgacgtcctcccaccatccagctgcttgtgtcttcttccgctgatgttcttctcttgacgtctggctgcctgtatgtctgcccgctagggtctcgggtttttatatgcctagaag-gggggacatcgcaggccaggatggtctttgaaaatgcaacacttgggcatgaaagctgcatcgcctctactcacctacgtccataggggtggagccctagtcaggggtcacctttctccacccagcacttccctgaccccctcccg--tgca i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100545667 784 - 115148730 GGTATtgaaacagcaaaggttctcttg-tccccctc----------------------------gcttcttcagtgacccgttcctcaaa-------------------------------cctccaggggagtatacagacgggcaggttgtggggcgccgaccccatgacagtgtctaggggtgagtgtttacagctcctgaagccccagtgggcatgtgttatagggtgctcttttagtttgccgtctataggcagcttgtgttaaccagctcaattagaccctctatcttgttgcaaggacagagggctttttgtatcccaggttcttgccttggtgtaccagaagaattggatcatatgtggacttggagaatgagtgcaaagttttatcgagtggaaggatttttccgccaatgtgagaaccagaagggagacggtttagccctagagttcggctgctcagtggcctcggctctcctccgactgccccagccaaactccaccttgtcccaccagtcaatggcctgccacggtgctgacgtctgttggtgtgctcttctgctggcttgctcccttgacatcctcccaccatccagctgcttgtgttttcttccgctgatgttcttctcttgacgtctggctgcctgtatgtctgcctgctagggtcttgggtttttataggcccaggat-gggggacatggcaggccaggatggtcttgaaaaatgcaacacttgggcatgaaagctggagtgcctctactcacctaggtccataggggtggagccctagccaggggtcgcctttctctacccagcacttccctgaccccctcccg--tagc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80690969 841 + 95678458 GGTATtgaaacaggaaaggttcccttg-tccccctcgcagagcgagcaatgcggctgt-ggcttgcttcttcagtgccccactgctcaaggacaggcatttccttgtatactgtattctgccctctaggggagtatacagacgggcaggttgt-gggctccgactccatggcagtgtctaggggtgagtgtttacagttcctgaagcctcagtgggcatgtgttatggggtgctcttttagtttgccatctataggcggcttgtgctaagcagctcaattagacccgctaccttgttgcaaggacagagggctttctgtatcccgggttcttgccttggtgtactggaagaatcggatcacacgtggacttggagagtgagtgcaaagttttattgagtggaaggatttttccgccaatgtgggagccagaagggagatggttttcccctggagttccatcgctcagcggccccggctctactctgactgccccagacaaactctgccttgtcccaccagtcaatggcctgccagcatgctgacgtctgtcggcgtgctcttctgccggcttgctcacttgacgtcctcctaccgtccagctgcttgtgtcttcttccgctggtatgctcctcttgatgtctggctgcctgtatgtctgcccgctagggtctcgggttttcataggcccaggat-ggggcacatggcaggccaggatggtcttgaaaaatgcaacatttgggcgtgaaagctggagtgcctctgctcacctaggtccataggagtggagccctggccaggggctgcctttctttacccagcacatccctgaccccctccca--tacc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81117145 841 - 96509753 GGTATtgaaacaggaaaggttcccttg-tccccctcgcagagcgagcaatgcggctgt-ggcttgcttcttcagtgccccactgctcaaggacaggcatttccttgtatactgtattctgccctctaggggagtatacagacgggcaggttgt-gggctccgactccatggcagtgtctaggggtgagtgtttacagttcctgaagcctcagtgggcatgtgttatggggtgctcttttagtttgccatctataggcggcttgtgctaagcagctcaattagacccgctaccttgttgcaaggacagagggctttctgtatcccgggttcttgccttggtgtactggaagaatcggatcacacgtggacttggagagtgagtgcaaagttttattgagtggaaggatttttctgccaatgtgggagccagaagggagatggttttcccctggagttccatcgctcagcggccccggctctactctgactgccccagacaaactctgccttgtcccaccagtcaatggcctgccagcatgctgacgtctgtcggcgtgctcttctgccggcttgctcacttgacgtcctcctaccgtccagctgcttgtgtcttcttccgctggtatgctcctcttgatgtctggctgcctgtatgtctgcccgctagggtctcgggttttcataggcccaggat-ggggcacatggcaggccaggatggtcttgaaaaatgcaacatttgggcgtgaaagctggagtgcctctgctcacctaggtccataggagtggagccctggccaggggctgcctttctttacccagcacatccctgaccccctccca--tacc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76374330 841 + 90941950 GGTATTGAAACAGGaaaggttcccttg-tccccctcgcaGAGCGAGCAATGCGGCTGT-GCcttgcttcttcagtgccccactgctcaaGGACAGGCATTTCCTTGTATACTGTATACTGCCCTCTAGGGGAGTATACAGACGGGCAGGTTGT-GGGCTCCGACtccatggcagtgtctaggggtgaatgtttacagttcctgaagccccagtgggcatgtgttatggggtgctcttttagtttgccATCTAGAGGTGGCTTGTGctaaccagctcaattagacccgcTACCTtgttgcaaggacagagggctttctgtatcccgggttcttgccttggtgtactggaAGAATCGGATCACACGTGGACTTGGAGAGTGAGTGcaaagttttattgagtggaaggaTTTTTCCGCCAATgtgggagccagaagggagatggttttcccctggagttccGTCGCTCAGCGGCCCCGGCTCTACTCTGACCGCCCCAGACAAACTCCGCCTTGTCCCACCAGTCAATGGCCTGCCAGCATGCTGATGTCTGTCGGCGTGCTCTTCTGCCGGTTTGCTCACTTGACGTCCTCCTACtgtccagctgcttgtgtcttCTTCCGCTGGTATGCTCCTCTTGATGTCTGGCTGCCTGTATGTCTGCCCGCTAGGGTCTCCAGTTTTCACAGGCCCAGGAT-GGGGCACATGgcaggccaggatggtcttgaaaaatgcaacatttgggcgtGAAAGCTGGAGTGCCTCTGCTCACCTAGGTCCATAGGAGTGGAGCCCTGGCCAGGGGCTgcctttctctacccagcacATCCCTGACCCCCTCCCA--TACC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18642246 841 + 33263144 GGTATtgaaacaggataggttcccttg-tccccctcgcagagcgagcaatgcggctgt-ggcttgcttcttcagtgccccactgctcaaggacaggcatttccttgtatactgtatactgccctctaggggagtatacagacgggcaggttgt-gggctccgactccatggcagtgtctaggggtgagtgtttacagttcctgaagccccagtgggcatgtgttatggggtgctcttttagtttgccatctataggcggcttgtgctaacgagctcaattagacccgctaccttgttgcaaggacagagggctttctgtatcccgggttcttgccttggtgtactggaagaatcggatcacacgtggacttggagagtgagtgcaaagttttattgagtggaaggatttttccgccaatgtgggagccagaagggagatggctttcccctggagttccgtcgctcagcggccccggctctattctgactgccccagacaaactccgccttgtcccaccagtcaatggcctgccagcatgctgacatctgtcggtgtgctcttctgccggcttgctcacttgacatcctcctaccgtccagctgcttgtgtcttcttccactggtatgctcctcttgatgtctggctgcctgtatgtctgcctgctagggtctcgggttttcataggcccaggat-ggggcacatggcagcccaggatggtcttgaaaaatgcaacatttgggcgtgaaagctggagtgcctctgctcacctaggtccataggggtggagccctggccaggggctgcctttctctacccagcacatccctgaccccctccca--tacc i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198346304 808 + 210400635 GGTATtgaaacaggaaagtttcccttg--ccccctcgcagggcatgtgataggggtgtgggctcgcttcttcagtgccccactgctcaaa-------------------------------cctctagcggagcatacagataagaaggctgtggggctcctaccctatggcagtgtctaagggtgaatgtttacagctcctgaagcccccgtgggcatgtgttatagggtgctcttttagtttgccatctataggcggcttgtgttaacaagctctattagaccctctaccttgtcacaaggacagagggctttctgtatccagggttcttgccttggtgtactggaagaatcgg----cacatggactgggagaatgagtgcaaagttttactgagtggaagtagtttttcactgatgtgggagccagaagggagagggttttcccctggagctcagctgctcagcggccctgattctcccacaactgtcccagccaaactcagccttgtcctgccagtcaatggcctgccagcatgcctatgtctattcatgtgctcttctgctggcatgctcccttgatgtcctctcaccatccagtttcttgtgtcttcttccgctgatgtgcttctcttgacgtctggctgcctg--tgtctgcctgctagggtctccggttttcataggctcaggataaggggacatggcaggccagggtggtcttggaaaatgcaacatttgggtgtgaaagcaggagtgcctatgctcacctaggtctgtaggggtggagccctagccaggggccacctttctctacccaggacttccctgacatcctcctgtatATC i calJac3.chr1 C 0 C 0 e mm10.chr15 77183458 1711 + 104043685 I e canFam3.chr10 40963804 0 - 69331447 C a score=482271.000000 s hg38.chr22_KI270876v1_alt 193966 155 + 263666 aGTATTAAGCCTGGCAAATAGTCGGCATTCAAAAATCAGTAGCTGATAATCAGCAACTTTATAATTATCACCACCATTATCTCAATACCCATTACCACACTGCAGAGATTAGAGAGTTTT-AATTCTAAAAGAAACAGCTTTAAACTGCAAAATTT s panTro4.chr22 34574304 155 + 49737984 aGTATTAAGCCTGGCAAATAGTCGGCATTCAAAAATCAGTAGCTGATAATCAGCAACTTTATAATTATCACCACCATTATCTCAATACCCATTACCACACTGCAGAGATTAGAGAGTTTT-AATTCTAAAAGAAACAGCTTTAAACTGCAAAATTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30993383 141 + 46535552 agtattaagcctggcaaatagtaggcattcaaa--------------aatcagcaactttataattAGCACCACCATTATCTCAATACCCATTACCACACTGCAGTGATTACAGATTTTT-AATTCTAAAAGAAACAGCTTTAAACTGCAAAATTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100546451 155 - 115148730 aGTATTAAGCCTGGCAAATAGTAGGCATTCAAAAATCAGTAGCTGATAATCAGCAACTTTATAATTATCACCACCATTATCTCAATACCCATTACCACATTGCAGAGATTACAGATTTTT-AATTCTAAAAGAATCAGCTTTAAACTGCAAAATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80691810 152 + 95678458 aGTATTAAGCCCGGCAAAGAGTAGACATTCAAAAATC---AGCTGATAATCAGCAACTTTATAATTATCGCCACCATTATCTCAATACCCATTACCACACTGTAGGGATTACAGATTTTT-AATTCTAAAAGAAACAGCTTTAAATTGCAAAATTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81117986 152 - 96509753 aGTATTAAGCCCGGCAAAGAGTAGACATTCAAAAATC---AGCTGATAATCAGCAACTTTATAATTATCGCCACCATTATCTCAATACCCATTACCACACTGTAGGGATTACAGATTTTT-AATTCTAAAAGAAACAGCTTTAAATTGCAAAATTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76375171 125 + 90941950 AGTATTAAGCCCGGCAAAGAGTAGACATTCAAAAATC---AGCTGATAATCAGCAACTTTATA---------------------------ATTACCACACTGTAGGGATTACAgattttt-aattctaaaagaaACAGCTTTAAACTGCAAAATTT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18643087 152 + 33263144 aGTATTAAGCCCGGCAAAGAGTAGACATTCAAAAATC---AGCTGATAATCAGCAACTTTATAATTATCACCACCATTATCTCAATACCCATTACCACACTGTAGGGATTACAGATTTTT-AATTCTAAAAGAAACAGCTTTAAACTGCAACATTT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198347112 154 + 210400635 AGAATTAAGCCTGGCAAA-AGTAGGCATTAAAAAATCAGTAGCTGATAATCAGCAACTTTATAATTATCACCACCATTATCTTAATACCTATTACCACATTGAAGGGATTATAGATTTTT-AATTATAAAAGAAACAGCTTTAAACTGCAAAATTT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40963804 154 - 69331447 agtataaaggttagcaaatagttggcattcaaaaatcagtagctGCTAATCTGCATCCTTAAAATTATCACCACCATTATCACCATACCTATTAGTGTGTTGTAGGGA--ACAAATTTTTAAATCCTAAAAGAAACAGCTTTAAAATGTACAGTAT i canFam3.chr10 C 0 I 222 e mm10.chr15 77183458 1711 + 104043685 I a score=839222.000000 s hg38.chr22_KI270876v1_alt 194121 307 + 263666 GTTACTGAATTGGTTGtttcttttttc---ttttttttgagacacagtcttg--ctgtcacct-------agtgcagtggcatgatctcggctcactgcaaccttcgcctccccagttcaagcaattctcatgccttggcctcccatgtatctgggattacaggtgtgtaccaccacgcccagctgatttttgca---ttttttgtagaaacggggtctcgtcatgttggccaggctggtctcgagctcctgacttcaagcaatccacccacctcccaaagtgctgagattacaggccaccacacccgaccCTGAATGGGTT s panTro4.chr22 34574459 310 + 49737984 GTTACTGAATTGGTTGtttcttttttctttttttttttgagacacagtcttg--ctgtcacct-------agtgcagtggcatgatctcggctcactgcaaccttcgcctccccagttcaagcaattctcatgccttggcctcccatgtatctgggattacaggtgtgtaccaccacacccagctgatttttgca---ttttttgtagaaacggggtctcgtcatgttggccaggctggtctccagctcctgacttcaagcaatccacccacctcccaaagtgctgagattacaggccaccacacctgaccCTGAATGGGTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30993524 306 + 46535552 GTTACCGATTTGGTTGtttcttttttc----tttttttgagacacagtcttg--ctgtcacct-------agtgcagcggcatgacctcggctcactgcaacctccgcctccccagttcaagcaattctcatgccttggcctcccaagtatctgggattacaggtgtgtaccaccacgcccagctgatttttgca---ttttttgtagcaacagggtcttgtcatgttggccaggctggtctcgagctcctgacttcaagcgatccacccacctcccaaagtgctgggattacaggccaccacgcccgaccCTGAATGGGTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100546606 299 - 115148730 GTTACTGAATTGGTTGtttcttttttc---------ttgag--acagtctgg--ctgtcacct-------agtgcagtggcgtgatcttggctcactgcaacctccgcctccctggttcaaacaattctcatgccttggcctcccaagtatctgggatcacaggcgtgcaccaccacgcccagctgatttttgca---ttttttgtagaaacggggtctcgtcatgttggccaggctggtctcaagctcctgacttcaagcgatccacccacctcccaaagtgctgagattacaggccaccacgcccgaccCTGAATGGGTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80691962 300 + 95678458 GTTACCGAA---------ttttttttt---ttttttccctgacacagtctcgctctgtcatct-------agtgcagtggcgtgatctcggctcactgcaacctccacctccccggttcaagcaattctcatgccttggcctcccaagtatctgggattacaggtgtgcaccaccacgcccagctgatttttgta---ttttttgtagaaacagggtcttgccatgttggtcaggctggtctcaagctcctgacttcaagtgatccacctgcctcccaaagtgctgaggttataggccaccacggccgaccCTGAATAGGTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81118138 301 - 96509753 GTTACCGAA--------tttttttttt---ttttttccctgacacagtctcgctctgtcatct-------agtgcagcggcgtgatctcggctcactgcaacctccacctccccggttcaagcaattctcatgccttggcctcccaagtatctgggattacaggtgtgcaccaccacgcccagctgatttttgta---ttttttgtagaaacagggtcttgccatgttggtcaggctggtctcaagctcctgacttcaagtgatccacctgcctcccaaagtgctgaggttataggccaccacggccgaccCTGAATAGGTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76375296 304 + 90941950 GTtaccgaatt-----ttttttttttt---ttttttccctgacacagtctcgctctgtcatct-------agtgcagtggcgtgatcttggctcactgcaacctccacctccccggttcaagcaattctcatgtcttggccccccaagtatctgggattacaggtgtgcaccaccacgcccagctgatttttgta---ttttttgtagaaacggggtcttgccatgttggtcaggctggtctcaagctcctgacttcaagtgatctacctgcctcccaaagtgctgaggttataggcCACCACGGCCGACCCTGAATAGGTT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18643239 298 + 33263144 GTTACCGAA-----------TTGtttt---tttttttcctgacacagtctcgccctgtcatct-------agtgcagtggggtgatctcggctcactgcaacctccacctccccggttcaagcaattctcatgccttggcctccaaagtatctgggattacaggtgtgcaccaccacgcccagctgatttttgta---ttttttgtagaaacggggtcttgccatgttgttcaggctggtctcaagctcctgacttcaagtgatccacctgcctcccaaagtgctgaggttacaggctaccacggccgaccCTGAATAGGTT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198347266 315 + 210400635 GATACTGAATTGGTTGtttctttttgt-------ttttgagacacagtcttcctctgtcgcctaggctgaagtgcagtggtatgatcttggctcactgcaacttctgcctcccgggttcaagcaattctcatgcctcagcctcccaagtatctgggattacaggcatgcaccaccatgtcaagctgatgtttgtatttttttttgtagaaacagggtctcatcatgttggccagactggtcttgaactcctggccttaagtgatccaccagcctcccaaagtgctgagattacaggccaccacacccgaccCTGAATGGGTT i calJac3.chr1 C 0 C 0 e mm10.chr15 77183458 1711 + 104043685 I e canFam3.chr10 40963958 222 - 69331447 I a score=890384.000000 s hg38.chr22_KI270876v1_alt 194428 262 + 263666 GTTTCTTAAGACTATGCCCAGCAGGCTAAGGATTTATACTAATGCTAGGGCAAGACTTCACCCCACTCATAGCGTAGTTCCTACAATAGTACTAGTGACAATGTTTCTGACAAACTTTCTCAATCAGTCATGCAAATATTAGTATCAACACAGTCTCCCATGCATGTCACCCC-AATTTTTTACATCCTGTG-AGTCAACTCTGTAGTTTGTTGTTGATATTCACAAAAGGAG--AAAAGCCACTGCCACTGAGACTGCAGAACAA s panTro4.chr22 34574769 262 + 49737984 GTTTCTTAAGACTATGCCCAGCAGGCTAAGGATTTATACTAATACTAGGGCAAGACTTCACCCCACTCATAGTGTAGTTCCTACAATAGTACTAGTGACAATGTTTCTGACAAACTTTCTCAATCAGTCATGCAAATATTAGTACCAACACAGTCTCCCATGCATGTCACCCC-AATTTTTTACATCCTGTG-AGTCAACTCTATAGTTTGTTGTTGATATTCACAAAAGGAG--AAAAGCCACTGCCACTGAGACTGCAGAACAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30993830 261 + 46535552 GTTTCTTAAGACTATGCCCATCAGGCTAAGGATTTATACTAATGCTAGGGCAAGACTTCATCCCACTCATAGCATAGTTCCTACAATAGTACTAGTGACAATGTTTCTGACAAACTTTGTCAATCAGTCATGCAAATATTAGCACCAACACAGTCTCCCATGCATGTCACCCC-AATTTTTTACATCCTGTG-AGTCAACTCTATAGTTGGTTGTTGATATTCAC-AAAGGAG--AAAAACCACTGCCACTGAGACTGCAGAACAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100546905 264 - 115148730 GTTTCTTAAGACTATGCCCATCAGGCTAAGGATTTATACTAATGCTAGGGCAAGACTTCACCCCACTCATAGCATAGTTCCTACAATAGTACTAGTGACAATGTTTCTGATAAACTTTCTCAATCAGTCATGCAAATATTAGCACCAACACAGTCTCCCATGCATGTCACCCC-AATTTTTTACATCCTGTG-AGTCAATTCTATAGTTTGTTGTTGATACTGACAAAAGGAGAAAAAAGCCACTGCCACTGAGACTGCAGAACAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80692262 260 + 95678458 GCTTCTTAAGACTATGCCCATCAGGCTAAGGATTTATACTAATGCTAAGGCAACACTTCACCCCACTCATAGCATAGTTCCTACAACAGTACTAATGACAATGTTTCTGACAAATTTTCTCAATCAGTCATGCAAATGTTAGCACCAACGCAGTCTCCCATGCATGTCACCCC-AATTTTTTACATCC--TG-AGTCAACTCCATAGTTTGTTGTTGATCTTCACAAAAGGAG--AAAAGTCACTGCCACTGAGACTGCAGAACAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81118439 260 - 96509753 GCTTCTTAAGACTATGCCCATCAGGCTAAGGATTTATACTAATGCTAAGGCAACACTTCACCCCACTCATAGCATAGTTCCTACAACAGTACTAATGACAATGTTTCTGACAAATTTTCTCAATCAGTCATGCAAATGTTAGCACCAACGCAGTCTCCCATGCATGTCACCCC-AATTTTTTACATCC--TG-AGTCAACTCCATAGTTTGTTGTTGATCTTCACAAAAGGAG--AAAAGTCACTGCCACTGAGACTGCAGAACAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76375600 260 + 90941950 GGTTCTTAAGACTATGCCCATCAGGCTAAGGATTTATACTAATGCTAAGGCAACACTTCACCCCACTCATAGCATAGTTCCTACAACAGTACTAATGACAATGTTTCTGACAAATTTTCTCAATCAGTCATGCAAATGTTAGCACCAACGCAGTCTTCCATGCATGTCACCCC-AATTTTTTACATCC--TG-AGTCAACTCCATAGTTTGTTGTTGATCTTCACAAAAGGAG--AAAAGTCACTGCCACTGAGACTGCAGAACAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18643537 260 + 33263144 GTTTCTTAAGACTATGCCCATCAGGCTAAGGATTTATACTAATGCTAAGGCAACACTTTACCCCACTCATAGCATAGTTCCTACAACAGTACTAATGACAATGTTTCTGAGAAATTTTCTCAATCAGTCATGCAAATGTTAGCACCAACGCAGTCTCCCATGCATGTCACCCC-AATTTTTTACATCC--TG-AGTCAACTCCATAGTTTGTTGTTGATCTTCACAAAAGGAG--AAAAGTCACTGCCACTGAGACTGCAGAACAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198347581 255 + 210400635 GTTTCTTAAGACTATGCCCATCAGGCTAAGGATTTATACTAATGCTAGGGCAAGACTTCACCCCACTCATAGCATAGTTCCTACAACAGTCTTAGTGACAATGTTTCTGACAAACTTTCTCAACCAGTCATGCAAATGTTAGCACCAATACAGTCTCGCAACCATGTCACCCCAAATTTTTCACATCCTGTGAAGACAACTTCA---------GTTGATATTCACAAAAGAAG--AAAAGCCACTGCCACTGAGACTGCAGAACAA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40964180 240 - 69331447 gcatccTGAGA--------------CCAAGGATTTATATTAAAACTAGGACACGACCTCTCCCCACTCATGATCTACTTTCTGCAACAGTTTTACTGACACTGTTTCTGGCAAACTTTCTCCATCAGTCATGGGAATGTTAGCACCAA--CAGTCTTGCACCCATGTCACCC--ATTTTTCTACATCCTGTGAAGCTCACTTCAAAGTTTGTTGTTGATATTCACAAAAGAAG--AAAA------GCCACTGAGACTGGAGAACAA i canFam3.chr10 I 222 C 0 e mm10.chr15 77183458 1711 + 104043685 I a score=840674.000000 s hg38.chr22_KI270876v1_alt 194690 286 + 263666 CTAGATAAAagtctcactttgttgcctaggttggagtacagtggcaggatcttggctcaccgcaacttct--gcctccctggttgaaatggttatcatgcctcagtctctcatgtagctgggattacggacaggtgtcaccacgcccagctaa-ttttttttgttatttttagtagaagcaaggtttctccatatta-cccaggttggtctcgaactcctggcctcaagtgctccacccacctcccagagtgctgggattacaagagtg----agccatggcgcccggccATAA s panTro4.chr22 34575031 288 + 49737984 CTAGATAAAagtctcactttgttgcctaggttggagtacagtggcaggatcttggctcaccgcaacttctgagcctccctggttgaaatggttatcacgcctcagcctctcatgtagctgggattatggacaggtgtcaccacgcccagctaa-ttttttttgttatttttagtagaagcaaggtttctccatatta-cccgggttggtctcgaactcctggcctcaagtgctccgcccacctcccagagtgctgggattacaagagtg----agccatggcgcccggccATAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30994091 286 + 46535552 CTAGATAAAagtctcactctgttgcctaggttggagtacagtggcaggatcttggctcactgcaacttct--gcctccctggttgaaatggttatcatgcctcagcctctcgtgtagctgggattacagacaggtgtcaccatgcccagctaa-atttttttgttatttttagtagaagcaaggtttctccatatta-cccgagttggtctcaaactcctggcctcaagtgctccgcccacctcccagagtgctgggattacaagagtg----agccacggcgcccagccATAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100547169 287 - 115148730 CTAGATAAAagtctcactctagtgcctaggttggagtacagtggcaggatcttggctcactgcaacttct--gcctccctggttgaaatggttaccatgcctcagcctctcgtgtagctgggattacggacaggtgtcaccacgcccagctaatttttttttgttatttttagtagaagcaaggtttctccatatta-cctgggttggtctcgaactcctggcctcaagtgctccgcccacctcccagagtgctgggattacaagggtg----agccacggtgcccggccATAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80692522 286 + 95678458 CTAGATAAAagtctcactctgttgcctaggttggagtgcagtggcaggatcttggctcactgcaacttct--gcctccctggttgaaatggttatcatgcctcagcctctcatgcagctgggattacagacgtgtgccaccacgcccagctaa-ttttttttgtttcttttagtagaagcggggtttctccatattg-cccaggttggtctcgaactcctggcctcaagtgctccgcccacctcccagagtggtgggattaaaggagtg----agccatggcgcccgaccATAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81118699 286 - 96509753 CTAGATAAAagtctcactctgttgcctaggttggagtgcagtggcaggatcttggctcactgcaacttct--gcctccctggttgaaatggttatcatgcctcagcctctcatgcagctgggattacagacgtgtgccaccacgcccagctaa-ttttttttgttacttttagtagaagcggggtttctccatattg-cccaggttggtctcgaactcctggcctcaagtgctccgcccacctcccagagtggtgggattaaaggagtg----agccatggcacccgaccATAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76375860 269 + 90941950 CTAGataaaagtctcactctgttgcctaggttggagtgcagtggcaggatcttggctcactgcaacttct--gcctccctggttgaaatggttatcatgcctcagcctctcatgcagctgggattacagacacgtgccaccacgcccagctaa-ttttttttgttacttttagtagaagcggggtttctccatattg-cctgggttggtctcgaactcctggcctcaagtgct-----------------tgctgggattaaaggagtg----agccatggcacctgacCATAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18643797 285 + 33263144 CTAGATAAAagtctcactctgttgcctaggttggagtgcagtggcaggatcttggctcactgcaacttct--gcctccc-ggttgaaatggttatcatgcctcagcctctcatgcagctgggattacagacgtgcgccaccacgcccagctaa-ttttttttgttacttttagtagaagcggggtttctccatattg-cccaggttggtctcgaactcctggcctcaagtgctacgcccacctcccagagtgctgggattaaaggagtg----agccatggcgcccgaccATAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198347836 289 + 210400635 CTAGACAAAagtctcactttgtggcctaggttggagtgcagtggcaggatcttggctcactgcaacttct--gcctccctggttgaaatggttcttgtgcctcagcctctcatgtagctgggattacagacatgtgccaccatgctcagctaa---ttttttgtcatttgtagtagaggtgaggtttctccatattacccccagttggtcttgaattcccggctgcaagtgctccacccgcctcccagagtgctgggattataggggtgagccagccatggtgcctggccACAA i calJac3.chr1 C 0 C 0 e mm10.chr15 77183458 1711 + 104043685 I e canFam3.chr10 40964420 0 - 69331447 C a score=1086430.000000 s hg38.chr22_KI270876v1_alt 194976 330 + 263666 CTACTTCCAAATGTCACAGATCAAAAGGGAGAAATTGGAAGGG----------ATAGCACAAGGTCTTTCTTTCCCTGAAGAG-TAAAAAATACACGACTGTCATCTCATCAATTCATACTTATTAACTGCCCATATGATGAATT-AGATGCTTTAGTAAAGGCATACATGAAAAGCAGTATCACTAGTCTCCTCA----CAATTCTAAGAAATAATGCTGTGAGGAAACCTGCCTAGCGAAAGGCAGTAGACTACAGGAAAAGAAATCAAACACGCAACAAAGGTAAGGCATGTACAAGGCAATGTA------AAAGGT----------------ACAAAGCAATTT----------------------------------------------------------------------ACCTAGAGTA-AGTTTAATTT s panTro4.chr22 34575319 330 + 49737984 CTACTTCCAAATGTCACAGATCAAAAGGGAGAAATTGGAAGGG----------ATAGCACAAGGTCTTTCTTTCCCTGAAGAG-TAAAAAATACACGACTGTCATCTCATCAATTCATACTTATTAACTGCCCATATGATGAATT-AGATGCTTTAGTAAAGGCATACATGAAAAGCAGTATCACTAGGCTCCTCA----CAATTCTAAGAAATAATACTGTGAGGAAACCTGCCTAGCGAAAGGCAGTAGACTACAGGAAAAGAAATCAAACACACAATAAAGGTAAAGCATGTACAAGGCAATGTA------AAAGGT----------------ACAAAGCAATTT----------------------------------------------------------------------ACCTAGAGTA-AGTTTAATTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30994377 330 + 46535552 CTACTTCCAAATGTCACAGATCAAAAGGCAGAAATTGGAAGGG----------ATAGCACAAGATCTTTCTTTCCCTGAAAAG-TAAAAAATACATGACTGTCATCTCATCAATTCATACTTATTAACTGCCCATATGACGAATT-AGATGTTTTAGTAAAGGCATACATGCAAAGAAGTATCACTAGCCTCCTCA----CAACTCTAAGAAATAATGCTGTGAGGAAACCTGCCTAGCGAAAGGCAGTAGACTACAGGAAAAGAAATCAAACATGCAATAAATGTAAAGCATGTACAAGGCAATGTA------AAAGGA----------------ACAAAGCAATTT----------------------------------------------------------------------ACCTAGAGTA-AGTTTAATTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100547456 330 - 115148730 CTACTTCCAAATGTCACAGATCAAAAGGGAGAAATTGGAAGGG----------ATAGCACAAGGTCTTTCTTTCTCTGAAGAG-TAAAAAATACATGACTGTGATCTCATCAATTCATACTTATTAACTGCCCATATGATGAATT-AGATGCTTTAGTAAAGGCATACATGAAAAGAAGTATTACTAGCCTCCTCA----CAATTCTAAGAAATAATGCTGTGAGGAAACTTGCCTAGCAAAAGGCAGTAGACTACAGGAAAAGAAATCAAACATGCAATAAATGTAAAGCATGTACAAGGCAATGTA------AAAGGT----------------ACAAAGCAATTT----------------------------------------------------------------------ACCTACAGTA-AGTTTAGCTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80692808 329 + 95678458 CTACTTCCAAATGTCACAGATCAAAAGGGAGAAATTAGAAGGG----------ATAGCACAAGGTCTTTCTTTCCCTGAAGAG-TAAAAAATACATGACTGTCATCTCATTGATTCATCCTTATTAACTGCCCATATGATGAATT-AGATGCTTTAGTAAAGGCATACATGAAAAGCAGTATCACTAGCCTCCTCA----CAATTCTAAGAAATAATGCTGTGAGGAAACCTGTCTAGCAAAAGGCAGTCGACTACAGGAAAAGCAACCAAACATGCAAT-AATGAAAAGCATGTACAAGGCAATGTA------AAAGGT----------------ACAAAGCAATTT----------------------------------------------------------------------ACCTAGAGTA-AGTTTAATTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81118985 329 - 96509753 CTACTTCCAAATGTCACAGATCAAAAGGGAGAAATTAGAAGGG----------ATAGCACAAGGTCTTTCTTTCCCTGAAGAG-TAAAAAATACATGACTGTCATCTCATTGATTCATCCTTATTAACTGCCCATATGATGAATT-AGATGCTTTAGTAAAGGCATACATGAAAAGCAGTATCACTAGCCTCCTCA----CAATTCTAAGAAATAATGCTGTGAGGAAACCTGTCTAGCAAAAGGCAGTAGACTACAGGAAAAGCAACCAAACATGCAAT-AATGAAAAGCATGTACAAGGCAATGTA------AAAGGT----------------ACAAAGCAATTT----------------------------------------------------------------------ACCTAGAGTA-AGTTTAATTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76376129 329 + 90941950 CTACTTCCAAATGTCACAgatcaaaagggagaaattagaaGGG----------ATAGCACAAGGTCTTTCTTTCCCTGAAGAG-TAAAAAATACATGACTGTCATCTCATCGATTCATCCTTATTAACTGCCCATATGATGAATT-AGATGCTTTAGTAAAAGCATACATGAAAAGCAGTATCACTAGCCTCCTCA----CAATTCTAAGAAATAATGCTGTGAGGAAACCTGTCTAGCAAAAGGCAGTAGACTACAGGAAAAGCAACCAAACATGCAAT-AATGTAAAGCATGTACAAGGCAATGTA------AAAGGT----------------ACAAAGCAATTT----------------------------------------------------------------------ACCTAGAGTA-AGTTTAATTT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18644082 329 + 33263144 CTACTTCCAAATGTCACAGATCAAAAGGGAGAAATTAGAAGGG----------ATAGCACAAGGTCTTTCTTTCCCTGAAGAG-TAAAAAATACATGACTGTCATCTCATCGATTCATCCTTATTAACTGCCCATATGATGAATT-AGATGCTTTAGTAAAGGCATACATGAAAAGCAGTATCACTAGCCTCCTCA----CAATTCTAAGAAATAATGCTGTGAGGAAACCTGTCTAGCAAAAGGCAGTAGACTACAGGAAAAGCAACCAAACATGCAAT-AATGTAAAGCATGTACAAGGCAATGTA------AAAGGT----------------ACAAAGCAATTT----------------------------------------------------------------------ACCTAGAGTA-AGTTTAATTT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198348125 333 + 210400635 CTACTTCCAAATGTCACAGATCAAAAGGGAAAAATTAGAAGGG----------AAAGCACAAGGTCTTTCTTTCCCTGAAAAG-TAAAAAATACATGACTGTCATCTCATTGATTCATACTTATTAACTGCTCATA--ATGAATGAAGATGCTTTAGTAAAGGTATACATGAAAAACAGTAACACTAGCCTCCTCAAACTAAATTCTAAGAAATAATGCTCTGAGGAAACCTGCCTAGCGAAAGGCAGTAGACTACAGGAAAAGAAACCAAACATGCAATAAATATAAAGCACGTACAAATCAATGTA------AAATGT----------------AAGAAGCAATTT----------------------------------------------------------------------ACCTAGAGTA-AGTTTGATTT i calJac3.chr1 C 0 I 307 s canFam3.chr10 40964420 411 - 69331447 CTACTTTCAAATGTCACAGATCAAAAGGGAGAAATCGGGGGGTGGGGGGGGACACAGCAC-AGGCCCTTCCTTCTCTCAAGAGAAAAAAAATACATCACTGTTA----------------TTATCAACT-CCCATA--ATGACTT-AGAGGTGTTAGCAAAAGCACACATGAAAAACAGTATCTCTAGCCTCTCCAGGCTAAATTTTATGAAATAATGCTGTGAGGTACCTTGCCTAGC-AAAGGCAGTGGACTAGACAAAAACAAACCCAGTATGTTCT------AAAGTAATTAAAAAGCAATTTAAAGTTTAAAGGTTTGTAGTATGTTTAACAGAAAGAAATATAAACACTCCATATACTTGCTAAACTTGTTTTTTAagagagggagggagagggaagggagcaggagagggaacctcaagtagactcccatct i canFam3.chr10 C 0 C 0 e mm10.chr15 77183458 1711 + 104043685 I a score=511924.000000 s hg38.chr22_KI270876v1_alt 195306 179 + 263666 -------------------------AA----AGGCTTTCAGTATGTTGAGC---GGAAAAAAAAAATTCCG------------------------------TCTACCTCCTAAACTTTTAAAGAGCTAATAAATCTAGTAAACTTACAAGTTGTC-AAAAACATGTCCAATTCAGGAAAGGGGTGGATGGAGGCAGAAAAC--AACCTAAGACATAAAAAACATAAAGGAACAGAATGAAAGAA s panTro4.chr22 34575649 172 + 49737984 -------------------------AA----AGGCTTTCAGTATGTTGAGC---GGGAAAAAAAAATTCCG------------------------------TCTACCTCCTAAACTTTTAAAGAGCTAATAAATCTAGTAAACTTACAAGTTGTC-AAAAACATGTCCAATTCAGGAAAGGGGTGGATGGAGGCAGAAAAC--AACATAAGACAT-------ATAAAGGAACAGAATGAAAGAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30994707 154 + 46535552 -------------------------AA----AGCTTTTCAGTATGTTGAGT---GGAAAAAAGAGCT-----------------------------------------------CTTTTAAAGAGCTAATAAATCTAGTAAACTTACAAGTTGTC-AAAAACATATCCAATTCAGGAAAGGGGTGGATGGAGGCAGAAAACATAACATGAGACAT----------AAAAGACAGAATGAAAGAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100547786 181 - 115148730 -------------------------AA----AGGTTTTCAGTATGTTGAGC---AGAAAAAAAAAATTCCG------------------------------TCTACCTCCTAAACTTTTAAAGAGCTAATAAATCTAGTAAACTTACAAGTTGTC-AAAAACATGTCCAATTCAGGAAAGGGGTGGATGAAGGCAGAAAACATAACATGAGACATAaaaaacataaaggaacagaatgaaagaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80693137 181 + 95678458 -------------------------AA----AGGTTTTCAGTATGCTGAGC--AGGGAAAAAAAAATTCCA------------------------------TCTACCTCCTAAATTTTTAAAGAGCTAATAAATCCAATAAACTTACAAGTTGTC--GAAACATGTCCAATTAAGGAAAGGGGTGGATGGAGGCAGAAAACATAACGTGAGACATAAAAAACATAAAGGAACAGAATGAAAGAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81119314 181 - 96509753 -------------------------AA----AGGTTTTCAGTATGCTGAGC--AGGGAAAAAAAAATTCCA------------------------------TCTACCTCCTAAATTTTTAAAGAGCTAATAAATCCAATAAACTTACAAGTTGTC--GAAACATGTCCAATTAAGGAAAGGGGTGGATGGAGGCAGAAAACATAACGTGAGACATAAAAAACATAAAGGAACAGAATGAAAGAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76376458 180 + 90941950 -------------------------AA----AGGTTTTCAGTATGCTGAGc---ggggaaaaaaaattcca------------------------------tctacCTCCTAAATTTTTAAAGAGCTAATACATTCAATAAACTTACAAGTTGTC--GAAACGTGTCCAATTAAGGAAAGGGGTGGATGGAGGCagaaaacataacgtgagacataaaaaacataaaggaacagaatgaaagaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18644411 180 + 33263144 -------------------------AA----AGGTTTTCAGTATGCTGAGC---GGGGAAAAAAAATTCCA------------------------------TCTACCTCCTAAATTTTTAAAGAGCTAATAAATCCAATAAACTTACAAGTTGTC--GAAACATGTCCAATTAAGGAAAGGGGTGGATGGAGGCAGAAAACATAACGTGAGACATAAAAAACATAAAGGAACAGAATGAAAGAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198348765 181 + 210400635 -------------------------aa----aGGTTTTCAGTACATTGATA---GGAAAAAAAAGATTCCA------------------------------TCTTCCTCCTAAACTTTAAAAGAGCTAATAAATCTAGTAAGCTTACAAGTTGTC-AAAAATATGTCCAATTCAGGAAAGGGGTGGATGGAGGCAGAAAATATAACATGAGACATAaaaaacataaaggaacaaaatgagagaa i calJac3.chr1 I 307 I 331 s canFam3.chr10 40964831 238 - 69331447 aagtgcagagcccaacatgaggctcaatcctaggactccaagatcatgacctaagccaaaatcaagtttcagactttaaccaagtgggtcacccaggtgccccTACTTGCTAAATTTGTAAAGAGCTAACAAATACAGTAAGCTCATAAGTTCTTAAAAAATACACCCAATTCAGGGAAGGGGTGAGCAGAG--AGGAAAG--AACATGAGA-AT-AAAAATGCAAAGAAACAAAAAGAGAGAA i canFam3.chr10 C 0 C 0 e mm10.chr15 77183458 1711 + 104043685 I a score=68662.000000 s hg38.chr22_KI270876v1_alt 195485 21 + 263666 AAAGAAGGATGGTCAAAAACA s panTro4.chr22 34575821 21 + 49737984 AAAGAAAGATGGTTAAAAACA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30994861 21 + 46535552 AAAGAAAGATGGTCAAAAACA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100547967 21 - 115148730 aaagaaaGATGGTCAAAAACA i nomLeu3.chr7b C 0 I 299 s rheMac3.chr10 80693318 21 + 95678458 AAAGAAAGATGCGCAAAAACA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81119495 21 - 96509753 AAAGAAAGATGCGCAAAAACA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76376638 21 + 90941950 aaagaaagatgggcaaaaaca i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18644591 21 + 33263144 AAAGAAAGACGGGCAAAAACA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198349277 21 + 210400635 aaagaaagatgggcaaaaaca i calJac3.chr1 I 331 C 0 s canFam3.chr10 40965069 17 - 69331447 ----AAGGAAGGGTAAAAACA i canFam3.chr10 C 0 C 0 e mm10.chr15 77183458 1711 + 104043685 I a score=1283427.000000 s hg38.chr22_KI270876v1_alt 195506 405 + 263666 GAAAGGAAATTTGACAT-AACAATCTTAAATATCTTAGGGAGGGAAGAAAATCTTAGGGAGAGAGGAAAATAAGGGAATGAAATGAAcatggaagtaatagtgatt--aagctggaatgc-atcatagctattaatgggttcaacatctctgttttactgat-aaatgaactgtggcctaatgaggttaagtaatttccttgagtttgcacagctacatagtagcaAGTCTACCAAGGTGATTAACACACAGTAAATACTCAAA--TTATTTTATGAATTAAAAAGAC-AAGtgttatggaccaagtgt---ttgtgtccccccaactccaagttcctatgttgaggccctaactcac--ctctttgcaccctgc-ccacccctgtacctgtattaggagatggagcttctaaggaaat s panTro4.chr22 34575842 405 + 49737984 GAAAGGAAATTTGACAT-AACAATCTTAAATATCTTAGGGAGGGAAGAAAATCTTAGGGAGAGAGGAAAATAAGGGAAGGAAATGAAcatggaagtaatagtgatt--aagctggaatgc-atcatagctattaatgggttcaacatctctgttttactgat-aaatgaattgtggcctaatgaggttaagtaatttccttgagtttgcacagctacatagtagcaAGTCTACCAAGGTGATTAACACACAGTAAATACTCAAA--TTTTTTTATGAATTAAAAAGAC-AAGtgttatggaccaagtgt---ttgtgtccccccaactccaagttcctatgttgaggccctaactcac--ctctttgcaccctgc-ccacccctgaagctgtattaggagatggagcttctaaggaaat i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30994882 406 + 46535552 GAGAGGAAATTTGACATAAACAATCCTAAATATCTTAGGGAGGGAAAAAAATCTTAGGGAGAGAGGAAAATAAGGGAAGGAAATGAAcatggaagtaatagtgatt--aagctggaatgc-atcatagctattaatgggttcaacatctctgttttactgat-aaatgaattgtggcctaatgaggttaagtaacttccttgagtttgcacagctacatagtagcaAGTCTACCAAGGTGATTAACACACAGTAAATACTCAAA--TTTTTTTATGAATTAAAAAGAT-AAGtgttatggaccaagtgt---ttgtgtccccccaactccaagttcctatgttgaggccctaactcac--ctctctgccccctgc-ccacccctgtagctatattaggagacggggcttctaaggaaat i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100548287 406 - 115148730 GAGAGGAAATTTGACATAAACAATCCTAAATATCTTAGGGAGGGAAGAAAATCTTAGGGAGAGAGGAAAATAAGGGAAGGAAATGAAcatggaagtaatagtgatt--aagctggaatgc-atcatagctattaatgggttcaatatctctgtgttactgat-aaatgaattgtggcctaatgaggttaagtaatttccttgagtttgcacagcaacatagtagcaAGTCTACCAAGGTGATTAACACACAGTAAATACTCAAA--TTTTTTTATGAATTAAAAAGAC-AAGtgttatggaccaagtgt---ttgtgtccccccaactccaagttcctatgttgaggccctaaCTCAC--CTCTCTGCCCCCTGC-CCACCCCTGTAGCTGTATTAGGAGATGGGGCTTCTAAGGAAAT i nomLeu3.chr7b I 299 I 109 s rheMac3.chr10 80693339 403 + 95678458 --GAGGAAATTTGACATAAACCATCCTAAATATCTTAAGGAGCGAAGAAAATCTTAGGGAGAGAGGCAAATAAGGGGAGGAAATGAACATGGAAGTAACAGTGATT--Aagctggaatgc-atcatagctattaatgggttcaacatctctgactgactgat-aaatgaattgtggcctaatgaggttaggtaatttccttgagtttgcacagctacatagtagcaagtctaccaagatGATTAACACAGAGTAAATACTCAAAA-TATTTTTATGAATTAAAAAGAC-AAGTGTTACAGACCAAGTGT---ttgtgtccccccaactccaagttcctatgttgaggccctaactca---ctccctgc-cccagc-cgacccctgtagctgtattaggacatggggcttctaaggaaat i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81119516 403 - 96509753 --GAGGAAATTTGACATAAACCATCCTAAATATCTTAAGGAGCGAAGAAAATCTTAGGGAGAGAGGCAAATAAGGGGAGGAAATGAACATGGAAGTAACAGTGATT--Aagctggaatgc-atcatagctattaatgggttcaacatctctgactgactgat-aaatgaattgtggcctaatgaggttaggtaatttccttgagtttgcacagctacatagtagcaagtctaccaagatGATTAACACAGAGTAAATACTCAAAA-TATTTTTATGAATTAAAAAGAC-AAGTGTTACAGACCAAGTGT---ttgtgtccccccaactccaagttcctatgttgaggccctaactca---ctccctgc-cccagc-cgacccctgtagctgtattaggacatggggcttctaaggaaat i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76376659 404 + 90941950 --gaggaaaTTTGACATAAACCATCCTAAATATCTTAGGGAGAGAAGAAAATCTTAGGGAGAGAGGCAAATAAGGGAAGGAAATGAACATGGAAGTAACAGTGATT--AAGCTGGAATGC-ATCATAGCTATTAATGGGTTCAACATCTCTGTTTGACTGAT-AAATGAATTGTGGCCTAATGAGGTTAGGTAATTTCCTTGAGTTTGCACAGCTACATAGTAGCAAGTCTACCAAGATGATTAACACAGAGTAAatactcaaaattttttttatgaattaaaaaGAC-AAGTGTTACAGACCAagtgt---ttgtgtccccccaactCCAAGTTCCTATGTTGAGGCCCTAACtca---ctccctgc-cccagc-ccacccCTGTAGCTGTATTAGGAGATGGGgcttctaagaaaat i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18644612 400 + 33263144 --GAGGAAATTTGACATAAACCATCCTAAATATCTTAGGGAGAGAAGAAAATCTTAGGGAGAGAGGCAAATAAGGGAAGGAAATGAACATGGAAGTAACAGTGATT--Aagctggaatgc-attatagctattaatgggttcaacatctc----tgactgat-aaatgaattgtggcctaacgaggttaggtaatttccttgagtttgcacagctacatagtagcaagtctaccaagatGATTAACACAGAGTAAATACTCAAAA-TTTTTTTATGAATTAAAAAGACAAAGTGTTACAGACCAAGTGT---ttgtgtccccccaactccaagttcctatgttgaggccctaactca---ctccctgc-cccagc-ccactcctgtagctgtattaggagacggggcttctaaggcaat i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198349298 409 + 210400635 gagaGGAAATCTGACATAAACAATCCTAACTATTTTAGGGGGAGAAGAAAATCTTAGGGAAAGAGGAAAATAAGGGAAGGAAATGAACATAAAACTAACAGTGATTAaaagctggaatgcaatcatagctattaatgggttcaacatctct-ttttactgat-aaatg-attgtagcctgatgaggttaggtaatttccttgagtttgcacagttacatagtagcagGTCCACCAAGGTGATTAACACACAGCAAATACTCAAT--TTTTTTTATGAATTAAAAGGAC-AAGTCTTACGGACCAGGTGC---ttgtgtccccccaattccaaattcctatgtttaggccctaagtcgccgtcctccac-ccctacgccacccctgtagctgtattaggaaatggggcttttaaggaaat i calJac3.chr1 C 0 C 0 s canFam3.chr10 40965086 349 - 69331447 GCAAGG------------ACCAACCCTAAAT-------------------ACACCAGGGATGGAGGAAAAGAAGAGAGGAAAATGAAAATGGAAAGAACACTGATT--GAATCAGAATGA-GTCACAGTTACTGAccagttcaacacttttgcttcaccgatggaaaaaattgtggtctcacaaggttgagtaatttctttgagtttacggagctagataatggcagatctATAAAGGT-------ACACAGT-AATACTCAAA--T-TTTTGATGAATTAGAAAGAC-AAGtgtgatggcctaaacatttgttgtgttcctcc-cctccaaaattcagtggtaaagccctaa-----------------------cacccactgtggctatattaggacacaaggcctctaaggaact i canFam3.chr10 C 0 C 0 e mm10.chr15 77183458 1711 + 104043685 I a score=53782.000000 s hg38.chr22_KI270876v1_alt 195911 23 + 263666 aattaatgttaagtaaggtgggg s panTro4.chr22 34576247 23 + 49737984 aattaatgttaagtaaggtgggg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30995288 23 + 46535552 aattaatgttaagtaaggtgggg i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80693742 23 + 95678458 aattaatgttaagtaaggtgggg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81119919 23 - 96509753 aattaatgttaagtaaggtgggg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76377063 23 + 90941950 aattaatgttaAGTAAGGTGGGG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18645012 23 + 33263144 aattaatgttaagtaaggtgggg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198349707 19 + 210400635 ----aaatttaaataaggtggga i calJac3.chr1 C 0 C 0 s canFam3.chr10 40965435 17 - 69331447 atttagagttaaatgag------ i canFam3.chr10 C 0 C 0 e mm10.chr15 77183458 1711 + 104043685 I e nomLeu3.chr7b 100548693 109 - 115148730 I a score=1627324.000000 s hg38.chr22_KI270876v1_alt 195934 509 + 263666 gtgataggggagtggcactgctccaataggatcattgtccttaaaagagacaccagagagcttgctcccctccccac-----------------tc--ctgtccc------tatgcacaaagaagaggttgtgtgagcacaagactagatggcagtcacctacaagccacaagaggaggcttcagaatgaaatctgccttgctggctccttggtcttggacttccaagatc-----------------aatttgctgttggttaagccactcagactgtggtaatttgtgatagcagccctagcagactaagataATGAGCATTAAAGTCTTCCGGCATTCAaaaggaaaagaaacagaaaagtaaaggaaagaGGGAGTGAGGTAATATTTATATTTTAGGTTTATTAAATAGT----------------------------------------TAAACCTAAAAT----ATATTACTTTTGTTTAATGGTGATTTGTACTCACTCACTCCCTCTTTACTTTTCTATTAGAGAATGAAAAGGGGGGCCACTGAGCCTCTGGCTAGGTTTAGTTTATGCAAAATTCCAGGTTACA s panTro4.chr22 34576270 527 + 49737984 gtgataggggagtcgcagcgctctaataggatcattgtccttaaaagagacaccagagagcttgctcccctccccac-----------------tc--ctgtccc------tatgcacaaagaagaggttgtgtgagcacaagactagatggcagtcacctacaagccacgagaggaggcttcagaatgaaatctgccttgctggctccttggtcttggacttccaagatc-----------------agtttgctgttggttaagccactcggactgtggtaatttgtgatagcagccctagcagactaagataATGAGCATTAAAGTCTTCTGGCTTTCAAAATGAAAAGAAACAGAAAAGTAAAGGAAAGAGGGAGTGAGGTAATATTTATATTTTAGGTTTATTAAATAGTTAAGTATAAAC--------------------------TAATAAACCTAAAATATAAATATTACTTTTGTTTAATGGTGATTTGTACTCACTCACTCCCTCTTTACTTTTCTATTAGAGAATGAAAAGGGGGGCCACTGAGCCTCTGGCTAGGTTTAGTTTATGCAAAATTCCAGGTTACA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30995311 546 + 46535552 gtgataggggagtggtgctgctccaataggatcattgtctttataagagacaccagagaacttgctcccctccccac-----------------tcctctatccc------tatgcacaaagaagaggttgtctgagcacaagactagatggcagccacttacaagccacgagaggaggcttcagaatgaaatctgccttgctggctccttggtcttggacttccaagatc-----------------aattttctgttggttaagccactcagactgtggtaatttgtgacagcagccctagcagactaaGATAATGAGCATTAAAGTCTTCTAGCATTCAAAAGGAAAAGAAACAGAAAAGTAAAGGAAAGAGGGAGTGAGGtaatatttatattttaagtttattaaatagtttataattaaCTAT----TAGTTTATACTTAACTATTTAACAAACCTAAAATATAAATATTACTTTTGTTTAATGGTGATTTGT----ACTCACTCCCTCTTTACTTTTCTATTAGAGAACGAAAA-GGGGGCCACTGAGCCTCTGGCTAGGTTTAGTTTATGCAAAATTCCAGGTTACA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100548802 550 - 115148730 GTGATAGGGGAGTGGCGATGCTCCaataggatcattgtccttataagagacaccagagagcttgctgccctccccac-----------------tcctctatccc------tatgcacaaagaagaggttgtgtgagcacaagactagatggcagccacctacaagccacgagaggaggcttcagaatgaaatctgccttgctggctccttggtcttggacttccaagatc-----------------aattttctgttggttaagccacccagactgtggtaatttgtgatagcagccctagcagactaagaTCATGAGCATTAAAGTCTTCTGGCATTCAaaaggaaaagaaacagaaaagtaaaggaaagaGGGAGTGAGGTAatatttatattttaagtttattaaatagtttataattaactattaaatagtttatacttaactatttaataAACCTAAAATATAAATATTACTTTTGTTTAATGGTGATTTGT----ACTCACTCCCTCTTTACTTTTCTATTAGAGAATGAAAA-GGAGGCCACTGAGCCTCTGGCTAGGTTTAGTTTATGCAAAATTCCAGGTTACA i nomLeu3.chr7b I 109 C 0 s rheMac3.chr10 80693765 545 + 95678458 gtgatagggtactggcgctgctccaatagaatcattgtccttataagagacaccagagagcttgctcccctccccac-----------------tcctctatccc------tatgcacaaaaaagaggctgtgtgaacacaagactagatggcagccacctacaagccatgagaggaggcttcagaatgaaatctgccttgctgggtccttggtcttggacttccaagatc-----------------aattttctgttggttgagccacccagactgtagtaatttgtgatagcagccctagcagactaaGATAACAAGCATTAAAGTCTTCTGGCATTCAAAAGGAAAAGAAACAGA-----AAAGGAAAGAGGGAGTGAGGTAATATTTATATTTTAGGTTTATTAAACAGTTTATAATTAACTATTAAATACATTATACTTAACTATTTAATAAACCTAAAATATAAGTATTACTTTTGTTTAATGGCGATTTGT----ACTCACTCCCTCTTTACTTTTCTATTAGAGAATGGAAA-GGGGGCCACTGAGCCTCTGGCTAGGCTTAGTTTAGGCAAAATTTCAGATTACA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81119942 544 - 96509753 gtgatagggtactggcgctgctccaatagaatcattgtccttataagagacaccagagagcttgctcccctccccac-----------------tcctctatccc------tatgcacaaaaaagaggctgtgtgaacacaagactagatggcagccacctacaagccacgagaggaggcttcagaatgaaatctgccttgctgggtccttggtcttggacttccaagatc-----------------aattttctgttggttgagccacccagactgtagtaatttgtgatagcagccctagcagactaaGATAACAAGCATTAAAGTCTTCTGGCATTCAaaaggaaaagaaacaga-----aaaggaaagaGGGAGTGAGGTAATATTTATATTTTAGGTTTATTAAACAGTTTATAATTAACTATTAAATACA-TATACTTAACTATTTAATAAACCTAAAATATAAGTATTACTTTTGTTTAATGGCGATTTGT----ACTCACTCCCTCTTTACTTTTCTATTAGAGAATGGAAA-GGGGGCCACTGAGCCTCTGGCTAGGCTTAGTTTAGGCAAAATTTCAGATTACA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76377086 545 + 90941950 GTGATAGGGTAGTGGCGCTGCTCCAATAGAATCATTGTCCTTgtaagagacaccagagagcttgctcccctccccac-----------------tcctctatCCC------TATGCACAAAAAAGAGGTTGTGTGAGCACAAGACTAGATGGCAGCCACCTACAAGCCACGAGAGGAGGCTTCAGAATGAAATCTGCCTTGCTGGgtccttggtcttggacttccaagATC-----------------AATTTTCTGATGGTTGAGCCACCCAGACTGTGGTAATTTGTGATAGCAGCCCTAGCAGACTAAGATAACAAGCATTAAAGTCTTCTGGcattcaaaaggaaaagaaacaga-----aaaggaaagagggagtgacgtaatatttatattttaggtttATTAAACAGTTTATAATTAACTATTAAATACATTATACTTAACTATTTAATAAACCTAAAATATAAGTATTACTTTTGTTTAATGGTGATTTGT----ACTCACTCCCTCTTTACTTTTCTATTAGAGAATGGAAA-GGGGGCCACTGAGCCTCTGGCTAGGCTTAGTTTAGGCAAAATTCCAGGTTACA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18645035 545 + 33263144 gtgatagggtagtggcgctgctccaatagaatcattgtccttataagagacaccagagagcttgctcccctccccac-----------------tcctctatccc------tatgcacaaaaaagaggttgtgtgagcacaagactagatggcagccacctacaagccacgagaggaggcttcagaatgaaatctgccttgctgggtccttggtcttggacttacaagatg-----------------aattttctgttggctgagccacccggactgtggtaatttgtgatagcagccctagcagactaaGATAACAAGCATTAAAGTCTTCTGGCATTCAAAAGGAAAAGGAACAGA-----AAAGGAAAGAGGGAGTGAGGTAATATTTATATTTTAGGTTTATTAAACAGTTTATAATTAACTATTAAATACATTATACTTAACTATGTAATAAACCTAAAATATAAGTATTACTTTTGTTTAATGGTGATTTGT----ACTCACTCCCTCTTTACTTTTCTATTAGAGAATGGAAA-GGGGGCCACTGAGCCTCTGGCTAGGCTTAGTTTAGGCAAAATTCCAGGTTACA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198349726 546 + 210400635 gtgatagcagagcagtgctgatccaataagaccattatccttataagagacacaagagagcttcctcccctccacac-----------------tcctctatccc------tacgcataaagaagaggttgtgtgagcataagactagatggcagccacgcacctgccatgagaagagtcttcagaatgaaacccaccttgctgggtccttggccttggacttccaagatc-----------------aattttctgttgtttaagccacccagactgtggtcatttgttatagcaggcctaccagattaaGATAACGAGCAGTAAAGTCTTCTGGCATTCAAAAGGAAAAGAAACAAGA----AAAGTAAAGAGGGACTGAGGTAATATTTCTATTTTAGGTTTATTAAACAGTTTATAATTAACTATTCAATAGTTTATACTTAATGATTTAACAAACCTAAAATATAAATATTACTTTTGTTTACTGGTGATTTGT----ACTCATTCTCTCTTTACTTTTCTGTTAAAGAATGAAAA-GAAGGCCACTGAGCCTCTGGCTACGTGTAGTTTAAGCAAAATTTCAGGTTTCA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40965452 434 - 69331447 gtaacaaagg--------------gataagattagtgtccttataagaagagacagagaacttgcccatgcttgcacctgtgcattcttgatcttcccctctcccccaagatgtgcatgaaaaggaggtcatatgagcacacagggagatggtgaccaactacaagccaagagaagaggtctcagaatgaaacctggtttgcaggcaccttgatctttgacttcccagcctggagaacctcgagagagaaatttctgctgtttaaggcacctgatcagcagtaattggttatagtagccctggcggactaagacaACAAGCACTGAAGTCCTTT--------------------------------AGGAAAG--------------TATTCAAGTTTTAACTT---------------------------------------------ACTTGTTAAACCTAAAATATACACACA---------------------------CCTTAATCCCATTTCG---TTCTGTTCAAGAATGAGGA-TG--------GAACCCCTGATGAGGTGT-----------------AGGTAACA i canFam3.chr10 C 0 C 0 e mm10.chr15 77183458 1711 + 104043685 I a score=543740.000000 s hg38.chr22_KI270876v1_alt 196443 144 + 263666 TTTCTAAAG------CTTCCCTA-AAGGTACCTACAGGTAGTAGAAACTC---AAACTTTCATTCAATGAATGAGCGGTCAG-AA-TCGATTCTGTACTTACAAAAGTAACATATCCTTTACCCACTCCCCAAACTATGCACCATCAACTGCGAAT s panTro4.chr22 34576797 141 + 49737984 TTTCTAAAG------CTTCCCTA-AAGGTACCTACAGGTAGTAGAAACTC---AAACTTTCATTCAATGAATGAGCGGTCAG-AA-TCGATTCTGTACTTACAAAAGTAACATATCCTTTACCCACTCCCCAAACTATGCACCATCAACTGCG--- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30995857 144 + 46535552 TTTCTAAAG------CTTCCCTA-AAGGTACCTACGGGTAGTAGAAACTC---AAACTTTCATTCAATGAATGAGTAGTCAG-AA-TTGATTCTGTACTTACAAAAGTCACACATCCTTTACCCACTCCCCAAACTATGCACCATCAACTGTGAAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100549352 144 - 115148730 TTTCTAAAG------CTTCCCTA-AAGGTACCTACGGGTAGTAGAAACTC---AAACTTTCATTCAGTGAATGAGTGGTCAG-AA-TTGATTCTGTACCTACAAAAGTAACATATCCTTTACCCACTCCCCAAACTATGCACCATCAACTGTGAAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80694310 144 + 95678458 TTTCTAAAG------CTTCCCCA-AAGGTACCTACAGGTAGTAGAAACTC---AAACTTTCATTCAATGAGTGAGTGGTCAG-AA-TCGATTCTGTACTTACAAAAGTAACATATCCTTTACCCACTCCCCAAACTATGCACCATCAACTGTGAAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81120486 144 - 96509753 TTTCTAAAG------CTTCCCCA-AAGGTACCTACAGGTAGTAGAAACTC---AAACTTTCATTCAATGAGTGAGTGGTCAG-AA-TCGATTCTGTACTTACAAAAGTAACATATCCTTTACCCACTCCCCAAACTATGCACCATCAACTGTGAAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76377631 144 + 90941950 TTTCTAAAG------CTTCCCTA-AAGGTACCTACAGGTAGTAGAAACTC---AAACTTTCATTCAATGAGTGAGTGGTCAG-AA-TCGATTCTGTACTTACAAAAGTaacatatcctttacccactccCCAAACTATGCACCATCAACTGTGAAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18645580 144 + 33263144 TTTCTAAAG------CTTCCCTA-AAGGTACCTACAGGTAGTAGAAACTC---AAACTTTCATTCAATGAGTGAGTGGTCAG-AA-TCGATTCTGTACTTACAAAAGTAACATATCCTTTACCCACTCCCCAAACTATGCACCATCAACTGTGAAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198350272 145 + 210400635 TTTCTAAAG------TTTCCCTA-AAGGTACCTACAGGTAATAGAAACTC---AAACTTTCATTTAATGAATGAGTGGTCAGAAA-TCAATTCCATACTCACAAAAGTAACATATCCTTTACCCATTCCCCAAACAATGCACTATCAACTGTGAAT i calJac3.chr1 C 0 I 21 s mm10.chr15 77185169 130 + 104043685 TTTACATAA------ATTCTCTA-ATGGCAC--------AGCAGAAACTCAGTAAACCTTCACTCAACTAATGAGTTCTTAA-AA-TAGAT---GTAGCTTTAAAAGTAATGTATCATTTACTTAGTTCCCAAACA------TACCAACTGCTCAT i mm10.chr15 I 1711 I 3 s canFam3.chr10 40965886 153 - 69331447 ATTCCAAAGGCAAACCTTCCCTACAAGGTATCTACAAATAATAGAAACTTAGTAAACTTTCAAGCAAATAATAAATGGTCAA-AACTTGATTCTGTACTCAGAAAAATAACATATCGTTTACCTAGT-CCCAAACTATGCACCACTGACTGCAAA- i canFam3.chr10 C 0 C 0 a score=37972.000000 s hg38.chr22_KI270876v1_alt 196587 30 + 263666 TAATAAATGCTCACAAGG------------------------------gtgtgtgtgtgt s panTro4.chr22 34576938 17 + 49737984 -AATAAATGCTCACAAGG------------------------------------------ i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30996001 31 + 46535552 TAAGAAATGCCCACAAGGG-----------------------------gtgtgtgtgtgt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100549496 30 - 115148730 TAATAAATGCTCACAAGG------------------------------gtgtgtgtgtgt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80694454 18 + 95678458 TAATAAATGCTCACAAGG------------------------------------------ i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81120630 30 - 96509753 TAATAAATGCTCACAAGG------------------------------GGgtgtgtgtgt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76377775 31 + 90941950 TAATAAATGCTCAcaaggg-----------------------------gggtgtgtgtgt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18645724 24 + 33263144 TAATAAATGCTCACAAGG------------------------------------gtgtgt i chlSab2.chr19 C 0 C 0 s mm10.chr15 77185302 60 + 104043685 TAGGGTGTGAGTGGATGGGATGAGACATTGTCTCTCTTCTCTCCCTCTGGTTGTATATAT i mm10.chr15 I 3 I 3 s canFam3.chr10 40966039 30 - 69331447 CAACAAATGCTCTAAAgt------------------------------gtgtgtgtgtgt i canFam3.chr10 C 0 C 0 e calJac3.chr1 198350417 21 + 210400635 I a score=7092.000000 s hg38.chr22_KI270876v1_alt 196617 10 + 263666 -gtgtgtgtgt s ponAbe2.chr22 30996032 10 + 46535552 -gtgtgtgtgt i ponAbe2.chr22 C 0 I 175 s nomLeu3.chr7b 100549526 10 - 115148730 -gtgtgtgtgt i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81120660 10 - 96509753 -gtgtgtgtgt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76377806 6 + 90941950 -gtgtgt---- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18645748 6 + 33263144 -gtgtgt---- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198350438 6 + 210400635 -gagaga---- i calJac3.chr1 I 21 I 1 s mm10.chr15 77185365 10 + 104043685 -gtgcgtgcgt i mm10.chr15 I 3 C 0 s canFam3.chr10 40966069 9 - 69331447 ggtgtgtgt-- i canFam3.chr10 C 0 C 0 e rheMac3.chr10 80694472 0 + 95678458 C e panTro4.chr22 34576955 0 + 49737984 C a score=-3387.000000 s hg38.chr22_KI270876v1_alt 196627 2 + 263666 gt- s ponAbe2.chr22 30996217 2 + 46535552 gt- i ponAbe2.chr22 I 175 C 0 s macFas5.chr10 81120670 2 - 96509753 gt- i macFas5.chr10 C 0 I 358 s calJac3.chr1 198350445 1 + 210400635 a-- i calJac3.chr1 I 1 C 0 s mm10.chr15 77185375 2 + 104043685 gc- i mm10.chr15 C 0 C 0 s canFam3.chr10 40966078 2 - 69331447 -ct i canFam3.chr10 C 0 C 0 e rheMac3.chr10 80694472 0 + 95678458 C e panTro4.chr22 34576955 0 + 49737984 C e papAnu2.chr10 76377812 0 + 90941950 C e chlSab2.chr19 18645754 0 + 33263144 C e nomLeu3.chr7b 100549536 0 - 115148730 C a score=27846.000000 s hg38.chr22_KI270876v1_alt 196629 10 + 263666 gtgtgtgtgt s panTro4.chr22 34576955 2 + 49737984 --------gt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30996219 10 + 46535552 gtgtgtgtgt i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80694472 8 + 95678458 --gtgtgtgt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81121030 10 - 96509753 gtgtgtgtgt i macFas5.chr10 I 358 C 0 s papAnu2.chr10 76377812 10 + 90941950 gtgtgtgtgt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18645754 10 + 33263144 gtgtgtgtgt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198350446 10 + 210400635 gCgtgtgtgt i calJac3.chr1 C 0 C 0 s mm10.chr15 77185377 10 + 104043685 gtgtgtgtgt i mm10.chr15 C 0 C 0 s canFam3.chr10 40966080 10 - 69331447 gtgtgtTTAT i canFam3.chr10 C 0 I 231 e nomLeu3.chr7b 100549536 0 - 115148730 C a score=170677.000000 s hg38.chr22_KI270876v1_alt 196639 72 + 263666 gtgtgtgtgtgtgtgtgtgtgtgtg-----------------------------------------------------tCTTGTA-------GCCCATATGGTAA--ATATACAGACTACCCAGACTACCA-CAC s panTro4.chr22 34576957 63 + 49737984 gtgtgtgtgtgtgtgtgtgtgtgtg-----------------------------------------------------tCTTGTA-------GCCCATATGGTAA--ATATA---------CAGACTACCA-CAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30996229 63 + 46535552 gtgtgtgtgtgtgtgtgtgtgtgtg-----------------------------------------------------tCTTGTA-------GCCCATATCGTAA--ATACA---------TAGACTACCA-CAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100549536 61 - 115148730 --gtgtgtgtgtgCGCGCGCGCACG-----------------------------------------------------TCTTGTA-------GCCCATATCGTAA--ATATA---------TAGACTACCA-CAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80694480 63 + 95678458 gtgtgtgtgtgtgtgtgtgtatgtg-----------------------------------------------------tCTTGTA-------GCCCATATGGTAA--ATATA---------TAGATTACCA-CAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81121040 63 - 96509753 gtgtgtgtgtgtgtgtgtgtatgtg-----------------------------------------------------tCTTGTA-------GCCCATATGGTAA--ATATA---------TAGATTACCA-CAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76377822 63 + 90941950 gtgcgcgcgcgtgcgcgtgtatgtg-----------------------------------------------------tCTTGTA-------GCCCATACGGTAA--ATATA---------TAGATTACCA-CAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18645764 63 + 33263144 gtgtgtgtgtgtgtgtgtgtgtgtg-----------------------------------------------------tCTTGTA-------GCCCATACGGTAA--ATATA---------TAGATGACCA-CAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198350456 63 + 210400635 gtgtgtgtgtgtgtgtgtgtgtgtg-----------------------------------------------------tCTTGTA-------GCCCACACCGTAA--AGACA---------CAGACTACCA-CGT i calJac3.chr1 C 0 C 0 s mm10.chr15 77185387 126 + 104043685 gtgtgtgtgtgtgtgtgtgtgtgtgtatgagagagagagagagagagagagagagagagagagagCGCACTCAAGTGCTCCTGCACATGCATGCACATACATTCATGCCATA---------CAGAATGCAATTTT i mm10.chr15 C 0 C 0 e canFam3.chr10 40966090 231 - 69331447 I a score=643095.000000 s hg38.chr22_KI270876v1_alt 196711 176 + 263666 AAGAATCTGGACAAGTCCCGACTACCCTTTTCCAACCTGCCTA--TTCTCCTAGCGCCTCC------TTATCCCCCTAGGAGTTTA-GCCATCACATATTAAACTTTACATTTTATTGGGAAAACAAAGAAAACATTTTAACTAACAAATTTTAAGAAAGCTAC-------ATTTTGTTTTGTGaaatagta s panTro4.chr22 34577020 176 + 49737984 AAGAATCTGGACAAGTCCCGACTACCCTTTTCCAACCTGCCTA--TTCTCCTAGCGCCTCC------TTATCCCCCTAGGAGTTTA-GCCATCACATATTAAACTTTACATTTTATTGGGAAAACAAAGATAACATTTTAACTAACAAATTTTAAGAAAGCTAC-------ATTTTGTTTTGTGAAACAGTA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30996292 185 + 46535552 AAGAATCTGGACAAGTCCCAACTACACTTTTCCAACCTGCCTA--TTCTCCTAGCCCCTCCTTATTTTTATCCCCCTAGGAGTTTA-GCCATCACATATTAAATTTTACATTTTATTGGGAAAACAAAGATACCATTTTAACTAACAAATTTTAAGAAAACTAC----TGTATTTTGTTTTGTGAAATAGTA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100549597 179 - 115148730 AAGAATCTGGACAAGTCCCGACTACACTTTTCCAACTTGCCTA--TTCTCCTAGCCCCTCC------TTATCCCCCTAGGAGTTTA-GCCATCACATATTAAATTTTGCGTTTTATTGGGAAAACAAAGATAACATTTTAACTAACAAATTTTAAGAAAGCTAC----TATATTTTGTTTTGTGAAATAGTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80694543 179 + 95678458 AAGAATCTGGACAAGTCCCGACTATCCTGTTCCAACCTGCCTA--TTCTCCTATCCCCTCC------TTATCCCCCTAGGAGTTTA-GCCATCACATATTAAATTTTACATTTTATTGGGAAAACAAAGATAAATTTTTAACTAACAAATTTTAAGAAAGCTAC----TATATTTTGTTTTGTAAAATAGTA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81121103 179 - 96509753 AAGAATCTGGACAAGTCCCGACTACCCTGTTCCAACCTGCCTA--TTCTCCTATCCCCTCC------TTATCCCCCTAGGAGTTTA-GCCATCACATATTAAATTTTACATTTTATTGGGAAAACAAAGATAAATTTTTAACTAACAAATTTTAAGAAAGCTAC----TATATTTTGTTTTGTGaaatagta i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76377885 179 + 90941950 AAGAATCTGGACAAGTCCCGACTACCCTTTTCCAACCTGCCTA--TTCTCCAATCCCCTCC------TTATCCCCCTAGGAGTTTA-GCCATCAcatattaaattttacattttattgggaaaacaaagataaatttttaactaacaaattttaagaaagctac----tatattttgttttgtgaaatagta i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18645827 179 + 33263144 AAGAATCTGGACAAGTCCCGACTACCCTTTTCCAATCTGCCTA--TTCTCCTATCCCCTCC------TTATCCCCCTAGGAGTTTA-GCCATCACATATTAAATTTTACATTTTATTGGGAAAACAAAGATAAATTTTTAACTAACAAATTTTAACAAAGCTAC----TATATTTTGTTTTGTGAAATAGTA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198350519 179 + 210400635 AGGAATGTGGACAAGTCCCAACTACCCTTTTCCATCCTGCCTA--TTCTCCTAGCCCTTCC------TTATCCCCCTAGAAGTTTA-GCCATCACATATTAAATTTTACATTTTATTGGTAAAACGAAGATAAAATTTTTACTAACAAATTTTAGGAAAGCTAC----TATATTTTGTTTTGTGAAATTGTa i calJac3.chr1 C 0 C 0 s mm10.chr15 77185513 158 + 104043685 ACTAAGTTGAAAAAGTCTTTA-----CTTTTCTGACCAATCTA--CTTTCCTGACCTCTTC------CTGTCTCT----------------TCATATTTTAAAATTTACATTTCATTGGCAAAACAAAGGTGAGGTTTTTGCTAGC-----TTCAGAAATCTTCCTAACATCTTTTGTTTAAAGAGATAGCA i mm10.chr15 C 0 I 306 s canFam3.chr10 40966321 179 - 69331447 AAAAGTCTGGCCAAGTCGGAA--ACCCTTTTC-AACTTGCCTACTCTCTCCCTACCTTTTC------TTA-CCCCTTAGGAGTTTATGCCATGACATTTTAAATTTTACGTTTTATTGGCAAAACAAAGA---ATTTTTCACTACCAGATTTTAAGAAATCTGCCTAATATATTTTGTTTGATAAAACAGTA i canFam3.chr10 I 231 C 0 a score=540207.000000 s hg38.chr22_KI270876v1_alt 196887 164 + 263666 aaa-aaataaataaat-aaataaaGCTTTATTGTCCAATTCTAATACAAATTTTGAAAGCTGT----AGTTAAAATTTAGTTTACTTCTTAAGTC-AAAGAGGTAAATCTTAAGAATTCAAAGGAAAATGAGAGTTACTG--AAAAAATGCAAATCACCGATAAACAAAGGTA s panTro4.chr22 34577196 159 + 49737984 AAA-AAAAAAAT------AATAAACCTTTATTGTCCAATTCTAATACAAATTTTGAAAGCTGT----AGTTAAAATTTAGTTTACTTCTTAAGTC-AAAGAGGTAAATCTTAAGAATTCAAAGGAAAATGAGAGTTACTG--AAAAGATGCAAATCACCGATAAACAAAGGTA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30996477 155 + 46535552 AAA-AAAAAAA----------AAAGCTTGATTGTCCAATTCTAATATAAATTTTGAAAGCTGT----AGTTGAAATTTAGTTTACTTCTTAAGTC-AAAGAGGTAAATGTTAAGAATTCAAAGGAAAATGAGGGTTACTG--AAAAAATGCAAATCACTGATAAACAAAGGTA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100549776 152 - 115148730 AAA-AAAA-------------AAAGCTTTATTGTCCAATTCTAATATAAATTTTGAAAGCTGT----AGTTAAAATTTAGTTTACTTCTTAAGTC-AAAGAGGTAAATCTTAAGAATTCAAAGGAAAATGAGAGTTACTG--AAAAAATGCAAATCACCAATAAACAAAGGTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80694722 165 + 95678458 aaataaataaacaaat-aaataaaGCTTTATTGCCCAATTCTAATGTAAATTTTGAAAGCTAT----AGTTAAAATTGAGTTTACTTCTTAAGTC-AAAGAGGCAAATCTTAAGAATTCAAAGGATAATGAAAGTTACTG--AAAAAATGCAAATCACCAATAAACAAAGGTA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81121282 165 - 96509753 aaataaataaacaaat-aaataaaGCTTTATTGCCCAATTCTAATGTAAATTTTGAAAGCTAT----AGTTAAAATTGAGTTTACTTCTTAAGTC-AAAGAGGCAAATCTTAAGAATTCAAAGGATAATGAAAGTTACTG--AAAAAATGCAAATCACCAATAAACAAAGGTA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76378064 165 + 90941950 aaataaataaacaaat-aaataaagctttattgccCAATTCTAATGTAAATTTTGAAAGCTAT----AGTTAAAATTGAGTTTACTTCTTAAGTC-AAAGAGGCAAATCTTAAGAATTCAAAGGATAATGAAAGTTactg--aaaaaatgcaaatcacCAATAAACAAAGGTA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18646006 164 + 33263144 AAATAAATAAACAAAA-AAATAAAGCTTTATTGCCCAATTCTAATGTAAATTTTGAAAGCTAT----AGTTAAAATTGAGTTTACGTCTTAAGTC-AAAG-GGCAAATCTTAAGAATTCAAAGGATAATGAAAGTTACTG--AAAAAATGCAAATCACCAATAAACAAAGGTA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198350698 157 + 210400635 aaa-aaaaaaaaaaaa-aaa-aaaGCTTTATTGCCCAATTTTAATGTAAATTTTGAAAGCTGT----AGTTAAAATTTAGTTTA---CTTAAGTCAAAAGAGGTGAATCTTAAGAATTCAAAGGAAAATGAACATTACTG--AAAAAATACAAATCATCAGT----TAAAGTA i calJac3.chr1 C 0 C 0 s mm10.chr15 77185977 163 + 104043685 aag-agataagtaattaaAATAGAGTTTTATTGCTCaattaaaatat-aattttaaaaGGTACTGTAAATTAAAATTTAGCT-----CTTATATG-AAAGAAGTTAATCTTAGCATTTGAAAGGAAAATGAATGTTACTG--AAAAATTACAAACTACCATTAAATCAAAGTA i mm10.chr15 I 306 I 142 s canFam3.chr10 40966500 159 - 69331447 ------ATAATAAAAG-TAA-AGAGCTTTATTGTTCAGCTCTAACATAAATCTTTAAAGTTAC----AATTAAAATT-AGTTTACTTTTTTAGTG-AAATGTAAAAATCTTAAGAGTTCAAAGGAATAGAAAAGTTACTGCTAAAAAATGCAAATTACCAATATACAAAAGGA i canFam3.chr10 C 0 C 0 a score=545040.000000 s hg38.chr22_KI270876v1_alt 197051 179 + 263666 GAAATCTGATACTTTTAATTGTGTCTTATAGTGCTGTTCATTACCCA---AATTGCTGGCAAATAGCATGGCCTTAATAACTGATGAATGAACGGGCTAAATATGTACT------AGAAAAAGA---AAT---GTGAACCCAGAACTTATAAATATGGTGGGGGGTACTTTTAAGTAGCA-TTTTTAAAAttttt- s panTro4.chr22 34577355 179 + 49737984 GAAATCTGATACTTTTAATTGTGTCTTATAGTGCTGTTCATTACCCA---AATTGCTGGCAAATAGCATGGCCTTAATAACTGATGAATGAACGGGCTAAATATGTACT------AGAAAAAGA---AAT---GTGAACCCAGAACTTATAAATATGGTGGGGGGTACTTTTAAGTAGCA-TTTTTAAAtttttt- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30996632 179 + 46535552 GAAATCTAATACTTTTAATTGTGTATTACAGTGCTGTTCATTACCCA---AATTGCTGGCAAATAGCATGGCCTTAATAACTGATGAATGAATGGGCTAAATATGTACT------AGAAAAAGA---AAT---GTGAACCCAGAACTTATAAATATGGTGGGGGGTACTTTTAAGTAGCA-ttttatttattttt- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100549928 180 - 115148730 GAAATCTAAGACTTTTAATTGTGTCTTATAGTGCTGTTCATTACCCG---AATTGCTGGCAAATAGCATGGCCTTAATAACTGATGAATAAATGGGCTAAATATGTACT------AGAAAAAGA---AAT---GTGAACCCAGAACTTATAAATATGGTGGGGGGTACTTTTAAGTAGCAttttttttaattttt- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80694887 179 + 95678458 GAAATCTAATACTTTCAATTGTGTCTTATAGTACTGTTCATTACCCA---AATTGCTGGCAAATAGCATGGCCTTAATAACTGATTAATGAATGTGCTAAATATGTACT------AGAAAAAGA---AAT---ATGAACCCAGAACTTATAAATATTGCGGGGGGTACTTTTAAGTAGCA-TTTTTTAAATTTGt- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81121447 179 - 96509753 GAAATCTAATACTTTCAATTGTGTCTTATAGTACTGTTCATTACCCA---AATTGCTGGCAAATAGCATGGCCTTAATAACTGATTAATGAACGTGCTAAATATGTACT------AGAAAAAGA---AAT---ATGAACCCAGAACTTATAAATATTGCGGGGGGTACTTTTAAGTAGCA-TTTTTTAAATTTGt- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76378229 179 + 90941950 GAAATCTAATACTTTCAATTGTGTCTTATAGTACTGTTCATTACCCA---AATTGCTGGCAAATAGCATGGCCTTAATAACTGATGAATGAACGGGCTAAATATgtact------agaaaaaga---aat---atgaaccCAGAACTTATAAATATTGCGGGGGGTACTTTTaagtagca-ttttttaaatttgt- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18646170 185 + 33263144 GAAATCTAATGCTTTCAATTGTGTCTTATAGTACTGTTCATTACCCA---AATTGCTGGCAAATAGCATGGCCTTAATAACTGATGAATGAACGGGCTAAATATGTACTAGAAAAAGAAAAAGA---AAT---ATGAACCCAGAACTTATAAATATTGCGGGGGGTACTTTTAAGTAGCA-TTTTTTAAAtttgt- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198350855 167 + 210400635 GAAATCTGGTACTTTTCATTGTGTCTTACAGTACTGTTCATTACCCA---AATTGTGGGCAAATAGCATGGTCCTAATAACTGATGAAAGAATGGCCTAAATACATAAT------AGAAAAAGAAAGAAG---AAGAACCCAGAACTTATAGGGGT----GGGAGAACTTTTAAGTAGCt-ttt------------ i calJac3.chr1 C 0 C 0 s canFam3.chr10 40966659 168 - 69331447 --------GCATTTTTGATTATGCCTTCTAGTA-TGTCCTTTCCCAAATCAGTTGCTGGTAGTTACCATGGTCTTGAAAACTGATGAATGAGTGGGTTAAATACATAAA------AGACAGAAA---AATAAGAAGAACCCAGAGTTTATAAATATAAAGGGAGACATTTT----------TGTCTTAAATTTGTT i canFam3.chr10 C 0 I 53 e mm10.chr15 77186140 142 + 104043685 I a score=119230.000000 s hg38.chr22_KI270876v1_alt 197230 46 + 263666 t---------------tattttttttgagatggagtcttgctctgtcacccaggctagagt s panTro4.chr22 34577534 46 + 49737984 t---------------tattttttttgagatggagtcttgctctgtcacccaggctacagt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30996811 46 + 46535552 t---------------tattttttttgagatggagtcttgctctgtcacccaggctagagt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100550108 46 - 115148730 t---------------tattttttttgagatggagtcttgctctgccacccaggctagagt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80695066 61 + 95678458 ttttttgtttttctttttttttttttgagatggagtcttgctctgtcacgcaggctagagt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81121626 61 - 96509753 ttttttgtttttctttttttttttttgagatggagtcttgctctgtcacgcaggctagagt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76378408 60 + 90941950 ttttttgtttttc-ttttttttttttgagatggagtcttgctctgtcacgcaggctagagt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18646355 58 + 33263144 ttttttgttttgc---ttttttttttgagatggagtcttgctctgtcacgcaggctagagt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198351022 43 + 210400635 ----------------tattttttt--agatgtagtcttactctgtcaccaaggctgggat i calJac3.chr1 C 0 C 0 e mm10.chr15 77186140 142 + 104043685 I e canFam3.chr10 40966827 53 - 69331447 I a score=223785.000000 s hg38.chr22_KI270876v1_alt 197276 81 + 263666 gcagtagcacga-tctcggctctctgcaacctccacctcccaggatcaaggtattctcctgcctcagcctcccaagtaactg s panTro4.chr22 34577580 81 + 49737984 gcagtagcacga-tctcggctctctgcaacctccacctcccaggatcgaggtattctcctgcctcagcctcccgagtaactg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30996857 81 + 46535552 gcagtggcatga-tctcggctctctacaagctccacctcccaggatcaaggtattctcctgcctcagcctcccgagtaactg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100550154 81 - 115148730 gcagtggcacaa-tctcggctctctgcaacctccacctcccaggatcaacgtcttctcctgcctcagcctccagagtaactg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80695127 77 + 95678458 gcagtggcacga-tcttggctctctgcaacctccacctcccaggctcaagg----ctcctgcctcaacctcccaagtaactg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81121687 77 - 96509753 gcagtggcacga-tcttggctctctgcaacctccacctcccaggctcaagg----ctcctgcctcaacctcccaagtaactg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76378468 77 + 90941950 gcagtggcacga-tcttggctctctgcaacctccacctcccaggctcaagg----ctcctgcctcaacctcccaagtaactg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18646413 75 + 33263144 gcagtggcacga-tcttgg--ctctgcaacctccacctcccaggctcaagg----ctcctgcctcaacctcccaagtaactg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198351065 81 + 210400635 gcagtggcatga-tctcggctcactgcaaactcttcctcccaggctcaagctattctcctgcctcagcctcctaagtaacca i calJac3.chr1 C 0 C 0 s mm10.chr15 77186282 78 + 104043685 gcacccacatgactcaccaccacctgaaaactccagttccaggcatctgat----gccctcttctggcctcctagggcaatg i mm10.chr15 I 142 I 91 e canFam3.chr10 40966827 53 - 69331447 I a score=158976.000000 s hg38.chr22_KI270876v1_alt 197357 64 + 263666 agattacaTTAAGTAGCATTTTAGTGGTCTTTATTTCTGAAATGTGCTCGGA------AAAAAAGACTAT s panTro4.chr22 34577661 64 + 49737984 agattacaTTAAGTAGCATTTTAGTGGTCTTTATTACTGAAATGTGCTCGGA------AAAAAAGACTAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30996938 60 + 46535552 gg----CATTAAGTAGCATTTTAGTGGTCTTTGTTACTGAAATGTGCCCAGA------AAAAAAGATTAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100550235 60 - 115148730 gg----cattaAGTAGCATTTTAGTGGTCTTTGTTACTGAAATGTGCCCAGG------AAAAAAGATTAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80695204 63 + 95678458 ggattacaTTAAGTAGCACTTTAGTGGTCTTTGTTACTGAAATGTGCCTGG-------AAAAAAGTTTAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81121764 63 - 96509753 ggattacaTTAAGTAGCACTTTAGTGGTCTTTGTTACTGAAATGTGCCTGG-------AAAAAAGTTTAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76378545 63 + 90941950 ggattacattaAGTAGCACTTTAGTGGTCTTTGTTACTGAAATGTGCCTGG-------AAAAAAGTTTAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18646488 63 + 33263144 ggattacaTTAAGTAGCACTTTAGTGGTCTTTGTTACTGAAATGTGCGTGG-------AAAAAAGTTTAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198351146 70 + 210400635 ggattacaTTAAGTATCATTTTAATGGTTTTTGTTGCAGAATTGTGCCCAGAAAAAAGAAAAAAGATTAT i calJac3.chr1 C 0 C 0 e mm10.chr15 77186360 91 + 104043685 I e canFam3.chr10 40966827 53 - 69331447 I a score=195325.000000 s hg38.chr22_KI270876v1_alt 197421 56 + 263666 ACCGAGAAAAGGGAGCAAAAAGAGTACTGTTTTCCTTGTAACGTTTAT----TAATATAT s panTro4.chr22 34577725 60 + 49737984 ACCAAGAAAAGGGAGCAAAAAGAGTACTGTTTTCCTTGTAACGTTTATTAAGTAATATAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30996998 60 + 46535552 ACCAAGAAAAGGGAGCAAAAAGAGTACTGTTTTCCTTGTAATGTTTATTAGGTAATATAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100550295 60 - 115148730 ACCAAGAAAAGGGAGCAAAAAGAGCACTGTTTTCCTTGTAACGTTTATTAGGTAATATAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80695267 60 + 95678458 ACCAAGAAAAGGCAGCAAAAAGAGTACTGTTTTCCTTGTAACATTTATTCGGTAATATAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81121827 60 - 96509753 ACCAAGAAAAGGCAGCAAAAAGAGTACTGTTTTCCTTGTAACATTTATTCGGTAATATAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76378608 60 + 90941950 ACCAAGAAAAGGCAGCAAAAAGAGTACTGTTTTCCTTGTAACATTTATTAGGTAATATAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18646551 60 + 33263144 ACCAAGAAAAGGCAGCAAAAAGAGTACTGTTTTCCTTGTAACATTTATTAGGTAATATAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198351216 60 + 210400635 ACCAAGAAAAGGGAGCAAAAATGGTACTGTTCTCCTTGTAACATTTATTAGGTAATATAT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40966880 45 - 69331447 ACCAAGAAAAGGAAGCAAAAGGGATGCTGTT---CTTGTCACATTTAC------------ i canFam3.chr10 I 53 C 0 e mm10.chr15 77186360 91 + 104043685 I a score=1116935.000000 s hg38.chr22_KI270876v1_alt 197477 317 + 263666 AATAGGCAGTACCACAGCTCATCTTACAGATGAAAGACCCTT---AAAGCCTCAAAACAAAACTCCTTTAAACGGATGCCTAAATGGGTTCACTTCCTCTGCTCTGAAAAAGGGTATTGTAGTCATTCTATAATCTATCTAAaatttacaaaataa----gtcatattctaaaaatgc-atttttatttcagttttttagaactctgatcacattctcccattaaaagaa--acacacacacac--------------acacacacacacacacac---------------acacacaca--------------------------------------------gatttataaatgatggctgtgtttctagaccag------atatcacaagaacctagtaa--tca s panTro4.chr22 34577785 307 + 49737984 AATAGGCAGTACCACAGCTCATCTTACAGATGAAAGACCCTT---AAAGCCTCAAAACAAAACTCCTTTAAACGGATGCCTAAATGGGTTCACTTCCTCTGCTCTGAAAAAGGATATTGTAGTCATTATATAATCTATCTAAaatttacaaaataa----gtcatattctaaaaatgc-atttttatttcagttttttagaactctgatcacattctcccattaaaagaa------------ac--------------acacacacacacacacac---------------acacacaca--------------------------------------------gatttataaatgatggctgtgtttctagaccag------atatcacaagaacctagtaa--tca i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30997058 309 + 46535552 AATAGGCAGTACCACAGCTCATCTTACAGATGAAAGACACTT---AAAGCCCCAAAACAAAACTCCTTTAAACGGATGCCTAAATGGGTTCACTACCTCTGTTCTGAAAAAGGATATTGTACTCATTATATAATCTATCTAAaatttacaaaataa----gtcatattctaaaaatgc-atttttatttcagttttttagaactctgatcacattctcccattaagaaac----------acac--------------acacacacacacacacac---------------acacacaca--------------------------------------------gatttataaatgatggctgtgtttctagaccag------atatcacaagagcctagtaa--tca i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100550355 317 - 115148730 AATAGACAGTACCACAGCTCATCTTACGGATGAAAGACCCTT---AAAGCCTCAAAACAAAACTCCTTTAAACGGATGCCTAAATGGGTTCACTTCCTCTGCTCTGAAAAAGGATATTGTAGTCATTATATAATCTATCTAAaatttacaaaataa----gtcatattctaaaaatgc-atttttatttcagttttttagaactctgatcacattctcccattaaaagaa--acatacacacac--------------acacacacacacacacac---------------acacacaca--------------------------------------------gatttataaatgatggctgtgtttctagaccag------atatcacaagagcctagtaa--tca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80695327 316 + 95678458 AATAGGCAGTACTATAGCTCATCTTACAGATGAAAGACCCTT---AAAGCCTCAAAATAAAACTCCTTTAAATGGATGCCTAAATGGGTTCACTTCCTCTGCTCTG-AAAAGGATATTATAGTCATTATATAATCTATCTAAaatttacaaaataa----gtcatattctaaaaatac-ctttttatttcagttttttagaactctgatcatattctcccactaaaagaa--acacacacacac--------------acacacacacacacacac---------------acacacgca--------------------------------------------gatttataaatgatggctgtgtttctagaccag------atatcacaagagcctagtaa--tca i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81121887 316 - 96509753 AATAGGCAGTACTATAGCTCATCTTACAGATGAAAGACCCTT---AAAGCCTCAAAATAAAACTCCTTTAAATGGATGCCTAAATGGGTTCACTTCCTCTGCTCTG-AAAAGGATATTATAGTCATTATATAATCTATCTAAaatttacaaaataa----gtcatattctaaaaatac-ctttttatttcagttttttagaactctgatcatattctcccactaaaagaa--acacacacacac--------------acacacacacacacacac---------------acacacgca--------------------------------------------gatttataaatgatggctgtgtttctagaccag------atatcacaagagcctagtaa--tca i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76378668 314 + 90941950 AATAGGCAGTACTACAGCTCATATTACAGATGAAAGACCCTT---AAAGCCTCAAAATAAAACTCCTTTAAATGGATGCCTAAATGGGTTCACTTCCTCTGCTCTG-AAAAGGATATTATAGTCATTATATAATCTatctaaaatttacaaaataa----gtcATATtctaaaaatac-ctttttatttcagttttttagaaCTCTGATCATATTCTCCCactaaaagaa----acacacacac--------------gcacacacacacacacac---------------acacacgta--------------------------------------------gatTTATAAATGATGGCTGTGTTTCTAGACCAG------ATATCACAAGAGCCTAGTAA--TCA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18646611 318 + 33263144 AATAGGCAGTACTGCTGCTCATCTTACAGATGAAAGACCCTT---AAAGCCTCAAAATAAAACTCCTTTAAATGGATGCCTAAATGGGTTCACTTCCTCTGCTCTG-AAAAGGATATTATAGTCATTATATAATCTATCTAAaatttacaaaataa----gtcatattctaaaaatac-ctttttatttcagttttttagaactctgatcatattctcccactaaaagaaacacacacacacac--------------acacacacacacacacac---------------acacacgca--------------------------------------------gatttataaatgatggctgtgtttctagaccag------atatcacaagaccctagtaa--tca i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198351276 358 + 210400635 AACAGGTAGTACCACAGCTTATCTTACAGATAAAAGACCTTT---AATGCCTCAAAATAAAACTCCTTTAAATGGATGCCTAAATGGGTTCACTTCCTCTGCTCTA-AAAAGGATATTATAGCCATGATATAATCTATCTAAAATTTACAAAATAA----GTTATATTCTAAAAATGC-ATTTTGATTTCAGATTTTTAGAAATCTGATCACATTCCCCCCTTAAAAGAA--ACATACAGATAC--------------AGACACACACACagagag---------------agagagagagagagagagagagagagagagagagagagagagagagaCTGATTGATTTATAAATGGTGGCTGTGTTTCTAGACCAG--------ATCCCCAGAGCCTAGTAA--TCA i calJac3.chr1 C 0 C 0 s mm10.chr15 77186451 314 + 104043685 AATAGGCAACAGTGTGGCTCACCTTATAGATAAAAGACCATT---AAGCCCTCAGAATAAAGCTCTCGAGAAC--ATGTTGAAAGGAGTTTACT----------TG--------------AGCTGTTATATAA--TATCTAAAATTCACAAAATAGATATATCATAGTCTAAAAACACGCTTTTTACTTCAGTTGTTTAGAATACTGATCACATTCATTCACATGGAGAA--AAAAGCACACCC---------------CATATATATCTAGAGACTGGCCCATAAGAACTACAGACACA--------------------------------------------ATAAAGTGGGGGAGAGAGGAGCTTTGAGACCTGTGAACTATATCAGCAGAAAATAAGAC--TCA i mm10.chr15 I 91 I 39 s canFam3.chr10 40966925 327 - 69331447 --TAGGTAATATCATAGCGCACCTCTCAGATGTAAGCCCCTTTTAAGAGTCTCAAAATAAAGCCTCTTTAAATGGATGCCTGTATGGATCCATCTTGTCTGCTCTGAAAAAAAATATCATAGCCAATATACATTCAGTCTAAAATTGACATAGTGG----GTCATATTCTAAAAATGC-ATCTTTATTTCAGTTCTTCAGAAC-----TCACATTTCCCCATTAAAAGAA--ATATACACACATGCATGCATGTGTGTGCATGCACGCAAACACAC---------------ACACACATA--------------------------------------------AATTTATAAATGGTGGCTGAATTTCCAGACTAC------ATA--ACAAGAACTTAGTAACTTCA i canFam3.chr10 C 0 C 0 a score=144669.000000 s hg38.chr22_KI270876v1_alt 197794 45 + 263666 -----------tggggaaaacgtttgagcacactgtaccagtaatgtacctgaact s panTro4.chr22 34578092 45 + 49737984 -----------tggggaaaacgtttgagcacactgtaccagtaatgtacctgaact i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30997367 45 + 46535552 -----------cagggaaaacatttgagcacactgtaccagtaatgtacctgaact i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100550672 45 - 115148730 -----------tggggaaaacatttgagcacactgtaccagtaatgtacctgaact i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80695643 45 + 95678458 -----------cggggaaaacattcgagcacactgtaccaggaatgtacctgaact i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81122203 45 - 96509753 -----------cggggaaaacattcgagcacactgtaccaggaatgtacctgaact i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76378982 45 + 90941950 -----------CGGGGAAAACATTTGAGCACACTGTACCAGGAATGTACCTGAACT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18646929 45 + 33263144 -----------cggggaaaacattcgagcacactgtaccaggaatgtacctgaact i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198351634 45 + 210400635 -----------TGGGGAAAATGTTTGagcccactgtaccagtaatgtacctgtact i calJac3.chr1 C 0 C 0 s canFam3.chr10 40967252 55 - 69331447 TGGGGAATGATGGGGAAAAAAATGTGAGTTCACCAAACCA-TAACATAGCTAAAAT i canFam3.chr10 C 0 C 0 e mm10.chr15 77186765 39 + 104043685 I a score=996375.000000 s hg38.chr22_KI270876v1_alt 197839 281 + 263666 actatccatctgaaataaaaataaac-aaaaaacaagatagctaaaatagcagaaaattac---aaataatgccaatgtaattaaataagagatacttttcccccagatcaccttgcacgttggttggtagaagacaaatttaatcactgactaagaaagtagagacttctgt--agatttagaggaaggagtaggagtactttcaagggttttagtcactggtgcaacttttt---------------aaaaaa-----------------------taatttcaattttatttcaaca---------------------cctactgcattcccattttccctga s panTro4.chr22 34578137 281 + 49737984 actatccatctgaaataaaaataaac-aaaaaacaagatagctaaaatagcagaaaattac---aaataatgccaatgtaattaaataagagatacttttcccccagatcaccttgcacgttggttggtagaagacaaatttaatcactgactaagaaagtagagacttctgt--agatttagaggaaggagtaggagtactttcaagggttttagtcactggtgcaacttttt---------------aaaaaa-----------------------taatttcaattttatttcaaca---------------------cctacagcattcccattttccctga i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30997412 281 + 46535552 actatccatctgaaataaaaataaac-aaaaaacaagatagctaaaatagcagaaaattac---aaataatgccaatgtaattaaataagagatacttttcccccagatcaccttgcacgttggttggtagatgacaaatttaatcactgactaagaaagtagagacttctgt--agatttagaggaaggagtaggagtactttcaagggttttagtcactggtgcaacttttt---------------aaaaaa-----------------------taatttcaattttatttcaaca---------------------cctacagcattcccattttccctga i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100550717 281 - 115148730 actatccatctgaaataaaaataaac-aaaaaacaagatagctaaaatagcagaaaattac---aaataatgccaatgtaattaaataagagatacttttccctcagatcaccttgcacgttggttggtagaagacaaatttaatcactgactaagaaagtagagacttctgt--agatttagaggaaggagtaggagtactttcaagggttttagtcactggtgcaactttta---------------aaaaaa-----------------------taatttcaattttatttcaaca---------------------cctacagcattcccattttccctga i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80695688 284 + 95678458 actatccatctgaaataaaaataaacaaaaaaacaagatagctaaaatagtagaaaattac---aaataatgccaatgtaattaagtaagagacacttttcccccaaatcaccttgcacattggttggtagaagacaaatttaatccctgactaagaaagtatagacttctgtagagatttagaggaaggagtaggagtgctttcaagggttttagtcactggtgcaacttttt---------------aaaaaa-----------------------taatttcaattttatttcaaca---------------------cctacagcactcccattttccctga i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81122248 284 - 96509753 actatccatctgaaataaaaataaacaaaaaaacaagatagctaaaatagtagaaaattac---aaataatgccaatgtaattaagtaagagacacttttcccccaaatcaccttgcacattggttggtagaagacaaatttaatccctgactaagaaagtatagacttctgtagagatttagaggaaggagtaggagtgctttcaagggttttagtcactggtgcaacttttt---------------aaaaaa-----------------------taatttcaattttatttcaaca---------------------cctacagcactcccattttccctga i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76379027 283 + 90941950 ACTATCcatctgaaataaaaacaaac-aaaaaacaagatagctaaaatagtagaaaattac---aaataatgcCAATGTAATTAAGTAAGAGACACTTTTCCCCCAAATCACCTTGCACATTGGTTGGTAGAAGACAAATTTAATCCCTGACTAAGAAAGTATAGACTTCTGTAGAGATTTAGAGGAAGGAGTAGGAGTGCTTTCAAGGGTTTTAGTCACTggtgcaacttttt---------------aaaaaa-----------------------taatttcaattttatttcaaca---------------------CCTACAGCACTCCCATTTTCCCTGA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18646974 284 + 33263144 actatccatctgaaataaaaacaaacaaaaaaacaaaatagctaaaatagtagaaaattac---aaataatgccaatgtaattaagtaagagacacttttcccccaaatcaccttgcacattggttggtagaagacaaatttaatccctgactaagaaagtagagacttctgtagagatttagaggaaggagtaggagtactttcaagggttttagtcactggtgcaacttttt---------------aaaaaa-----------------------taatttcaattttatttcaaca---------------------cctacagcactcccattttccctga i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198351679 273 + 210400635 actatcaatctgaaataaaaataaac--aaaaaccagatagctaaaatagcagaaaattacaaaaaaaaaagccaatataattaaataagagata-tttccccccaaatcatcttgcttcttggttggtagaagacaaatttaatc----actaagaaagcagagacttctgtagagatttagaggaaagagtagga---cttccaagggttttagtcactggtgtaacttttt---------------aaaaaa-----------------------taatttcaattttatttcaaca---------------------tctg----atttccattttccctga i calJac3.chr1 C 0 I 316 s mm10.chr15 77186804 307 + 104043685 gcaaacaagcaagcaagcaagcaaacaagcaagcaagcaagc-aggcaggcaGGAAGCTCC---AGATGGTCCTGATGCGG-TATATAGGAAATAACTGCAC----AATCAT--------TCAGGTGGTAGCAGACTAAATTAATCACTTGCTATGGAAGTAGAAG----TGTAGAGA-GCAGAGAAAGGAGCAGGGG--CTCACAAGGGCTCTAGTGCCTGGCACAGCCTTTA---------------GGTTAAGTTTGTTTGTTGGCTTTCCTACTCAATTTTACCTTTGTTTGGATATAGTTTTACCTTTGTTTGTTTCCCAAAACACCTCCTTTTTAAAATA i mm10.chr15 I 39 C 0 s canFam3.chr10 40967307 286 - 69331447 GCCATTCATCTGAAAT-------AAC-AGAAAACAAGATAGCTAAAATAGCCACAAATTAC---AAATAATGCCAACATAATTAAGAATG----ATTTTCTTTGCAAATCACCTTGCATGTTGGTTAGCAGAGGACAAATTTAATCACTGACAAAGACAGTAGAGACATCCGTGGAGATTTAG-GGAAGAAACAGTACTTATTTCAAGGGTTTTAGTGACTGGTGTAGGTTTTTTTAATGCGGTTTTTAAAAGTA-----------------------TAATTTCAATCTTATTTTAACA---------------------CCTATGACATTTCCATTTTCCCTGA i canFam3.chr10 C 0 C 0 a score=51815.000000 s hg38.chr22_KI270876v1_alt 198120 13 + 263666 tacaaatgtaatt s panTro4.chr22 34578418 13 + 49737984 tacaaatgtaatt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30997693 13 + 46535552 tacaaatgtaatt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100550998 13 - 115148730 tacaaacgtagtt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80695972 13 + 95678458 tacaaatataatt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81122532 13 - 96509753 tacaaatataatt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76379310 13 + 90941950 TACAAATGTAATT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18647258 13 + 33263144 tacaaatgtaatt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198352268 13 + 210400635 TACAAAAGTAATT i calJac3.chr1 I 316 C 0 s mm10.chr15 77187111 13 + 104043685 TACAAATGCAATT i mm10.chr15 C 0 C 0 s canFam3.chr10 40967593 12 - 69331447 -TCAAATATCATT i canFam3.chr10 C 0 I 1 a score=792289.000000 s hg38.chr22_KI270876v1_alt 198133 271 + 263666 ctagtcaatcaaccataaattaggtaattt--tttatttgata-atgaaacaaagacatgaagataaggaaaaagaa--acagcaagatttAGAACAGAATAGGGAAGCAAAAAGTAATGCTTAATAAGTACTTGCTAAAAGGACAGGAAGGGAGAAAGGAAGAGAAAAAAAAGAGGGGAAAATGTGGATATATAAAAGAATGCTATTAGTGTAAGTAAAGATTAAACAGTAGAAGAGAGAACTGGAGGTGAAGGGTAGAAAGGCAGACCTAACAT s panTro4.chr22 34578431 271 + 49737984 ctagtcaatcaaccataaattaggtaattt--cttatttgata-atgaaacaaagacatgaagataaggaaaaagaa--acagcaagatttAGAACAGAATAGGGAAGCAAAAAGTAATGCTTAATAAGTACTTGCTAAAAGGACAGGAAGGCAGAAAGGAAGAGAAAAAAAAGAGGGGAAAATGTGGATATATAAAAGAATGCTATTAGTGTAAGTAAAGATTAAACAGTAGAAGAGAGAGCTGGAAGTGAAGGGTAGAAAGGCAGACCTAACAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30997706 268 + 46535552 ctagtcaatcaaccataagttaggtaattt--tttatttgata-atgaaacaaagacatgaagataaggaaaaagaa--acagcaagatttaaaacagaatagggaagcaaaa---aatgcttaataaatacttgctaaaaggagaggaagggagaaaggaagagaaaagaaagaggggcaaatgtggatatataaaagaatgctattagtgtaagtaaagattaaacagtagaagagagagctggaggtgaagggtagaaaggaggacctaacat i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100551011 273 - 115148730 ctagtcaatcaaccataagttaggtaattt--tttatttgata-atgaaacaaagacatgaagataaggaaaaagaaacacagcaagatttagaacagaatagggaaggaaaacgtaatgcttaataaatacttgctaaaaggagaggaagggagaaaggaagagaaaagaaagaggggaaaatgtggatatataaaagaatgctattagtgtaagtaaagattaaacagtagaagagagagctggaggtgaagggtagaaaggaggacctaacat i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80695985 269 + 95678458 ctcatcaatcaaccatacgttaggtaattt--tttatttgata-atgaaacaaagacatgaagataaggaaaaagaaacacggcaagatttagaacagaatgggggaggaaAAAATAATGCTTAATAAATACTTGCTAaaagga----aagggagaaaggaagagaaaagaaagagggggaaaTGTGGATATACAAAAGAATGCTATCAGTGTAAGTAAAGATTAAACAGTAGAAGAGAGAGCTGGAGGTGAAGGGTAGAAAGGAGGGCCTAACAC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81122545 269 - 96509753 ctcatcaatcaaccatacgttaggtaattt--tttatttgata-atgaaacaaagacatgaagataaggaaaaagaaacacggcaagatttagaacagaatgggggaggaaaaaataatgcttaataaatacttgctaaaagga----aagggagaaaggaagagaaaagaaagagggggaaatgtggatatacaaaagaatgctatcagtgtaagtaaagattaaacagtagaagagagagctggaggtgaagggtagaaaggagggcctaacac i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76379323 269 + 90941950 CTCATCAATCAACCATATGttaggtaattt--tttatttgata-atgaaacaaagacatgaagataaggaaaaagaaacacagcaAGATTTAGAACAGAATGGGggaggaaaaaataatgcttaataaatacttgctaaaagga----aagggagaaaggaagagaaaagaaagagggggaaatgtggatatataaaagaaTGCTATCAGTGTAAGTAAAGATTAAACAGTAGAAGAGAGAGCTGGAGGTGAAGGGTAGAAAGGAGGGCCTAACAC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18647271 273 + 33263144 ctcatcaatcaaccatacgttaggtaattt--tttatttgata-atgaaacaaagacatgaagacaaggaaaaagaaacacagcaagatttAGAACAGAATGGGGGAGGAAAAAAAAATGCTTAATAAATACTTGCTAAaaggaaaggaagggagaaaggaagagaaaagaaagaGGGGGAAATGTGGATATATGAAAGAATGCTATCAGTGTAAGTAAAGATTAAACAGTAGAAGAGAGAGCTGGAGGTGAAGGGTAGAAAGGAGGGCCTAACAC i chlSab2.chr19 C 0 I 307 s calJac3.chr1 198352281 255 + 210400635 CTAGTCAATCAACCGCAAGTTAGGCAATTT--TTTATTTGATA-ATGAAACAAAGACATGAAGACAATGAAAAAGAA--ACAACAAGATTTAAAACAGAATGGGGAGGGGAAAAGT-ACATTTAATAAATACTTGCTAAAAGGA-----------GAAAAAAAGGAGAAGAAAGA-GGAAAAATCTGGATATATAAAAGAATGTTGTTAGTATAAATAAAGATTAAGCAGTAAAAGAGAGAGATG---GTGAAGGGTAGAAAAGAGGACCTAACAT i calJac3.chr1 C 0 C 0 s mm10.chr15 77187124 211 + 104043685 CCAGGTAATCAACTTAAAA--GGGGAATTTACTTTATTTTACACATGAAGCAAAAGAAGGGAGGCAAGAAAAACAAA--ATACCAAGATTCCAACCAA---GGGAAAGGGAAAAGAAAACCTTACTGAAGTACTGCTGGATAGA--------GTGGAGGGAAGA-AACAGTAAGATGCTGAGGCGT-------------------------------------------------GAGAGAGGTGGGGAGGAGGGCAGAGGAAGGGGACCCAACAC i mm10.chr15 C 0 C 0 e canFam3.chr10 40967605 1 - 69331447 I a score=894115.000000 s hg38.chr22_KI270876v1_alt 198404 272 + 263666 ACCCATGATATTTTTAAAGGAGAAAGA-GACTTGGTGATAAGGAGGAGACCCTGAATCAGTTCTCAGTATTGCCACTCAGGAGTACAACAGAC-------------TCAGAACTGCTGGGATGG------------------GTCTGAAACGGTAACaatcataactaacatatactgaacatttactatgcaccaagaactgttctgagagcgttacatggctcaaaacaaccctctgtgatagatattatgttattctcattttacagatgagaaagcatggtaacttatccaatgtcattc s panTro4.chr22 34578702 272 + 49737984 ACCCATGATATTTTTAAAGGAGAAAGA-GACTTGGTGATAAGGAGGAGACCCTGAATCAGTTCTCAGTATTGCCACTCAGGAGTACAACAGAC-------------TCAGAACTGCTGGGATGG------------------GTCTGGAACAGTAACaatcataactaacatatactgaacatttactatgcaccaagaactgttctgagagcattacatggctcaaaacaaccctctgtgatagatattatgttattctcattttacagatgagaaagcatggtaatttatccaatgtcattc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30997974 272 + 46535552 acccatgatatttttaaaggagaaaga-gacttggtgataaggaggagaccctcaatcagttctcagtattgccactcaggagtacaacagac-------------tcagaactgctgggatgg------------------gtctggaACAGTAACaatcataactaacatatactgaacatttactatgcaccaagaactgttctgagagctttacatggctcaaaacaaccctctgtgatagatattatgctattctcattttacagatgagaaagcatggtaatttatccaatgtcgttc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100551284 272 - 115148730 acccatgatatttttaaaggagaaaga-gacttggtgataaggaggagaccctgaatcagttctcagtactgccactcaggagtacaacagac-------------tcagaactgctgggatgg------------------gtctggaACAGTAAcagtcataactaacatatactgaacatttactatgcaccaggaactgttctgagagctttacatggctcaaaacaaccctctgtgatagatattatgttattctcattttacagatgagaaagcatggtaatttatccaatgtcattc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80696254 272 + 95678458 ACCCATGGTATTTTTAAAGGAGAAAGA-GACTTGGTGATAAGGAGGAGGCCCTGAATCAGTTCTCAGTATTGCCACTCAGGAGTACAGCGGAC-------------TCAGAACTGCTGGGATGG------------------GTCTGGAACAGTAACACTCataactaacatatactgaacatctactatgcaccaggaactgtcctgagagcttgatatggctcaaaacaaccctctgtgatagatattatgttactctcattttatagatgagaaagcatggtaatttatccaatgtcattc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81122814 272 - 96509753 acccatggtatttttaaaggagaaaga-gacttggtgataaggaggaggccctgaatcagttctcagtattgccactcaggagtacaaccgac-------------tcagaactgctgggatgg------------------gtctggaACAGTAAcactcataactaacatatactgaacatctactatgcaccaggaactgtcctgagagcttgatatggctcaaaacaaccctctgtgatagatattatgttactctcattttatagatgagaaagcatggtaatttatccaatgtcattc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76379592 272 + 90941950 ACCCATggtatttttaaaggagaaaga-gactTGGTGATAAGGAGGAGGCCCTGAATCAGTTCTCAGTATTGCCACTCAGGAGTACAACGGAC-------------TCAGAACTGCTGGGATGG------------------GTCTGGAACAGTAACACTCATAACTAACATATACTGAACATCTACTATGCACCAGGAACTGTCCTGAGAGCTTGATATGGCTCAAAACAACCCTCTGTGATAGATATTATGttactctcattttatagatgagaaagcaTGGTAATTTATCCAATGTCATTC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18647851 272 + 33263144 ACCCATGGTATTTTTAAAGGAGAAAGA-GACTTGGTGATAAGGAGGAGGCCCTGAATCAGTTCTCAGTATTGCCACTCAGGAGTACAACGGAC-------------TCAGAACTGCTGGGATGG------------------GTCTGGAACAGTAATACTCataactaacatatactgaacatctactatgcaccaggaactgtcctgagagcttgatatggctcaaaacaaccctctgtgatagatattatgttactctcattttatagatgagaaagcatggtaatttatccaatgtcattc i chlSab2.chr19 I 307 C 0 s calJac3.chr1 198352536 269 + 210400635 ACCCACGGTATTTTTAAAGGAGAAAGA-GACTTGGTGATAAGGAGGACACCCTAAATCGGTTCTCAGTATTGCCACTCA-GAGTACAACCGAC-------------TCAGAACAGCTGGGATGG------------------GTCCGGAACAAAAACAGGaacaactaacatat--tgaacatatactacgcaccaggagctgttctgagagctttgcatggctcaaaacaaccctctgtgatagatattatgttgttctcattttatagatgagaaagcatggtaatttatccaatgtcattc i calJac3.chr1 C 0 C 0 s mm10.chr15 77187335 296 + 104043685 -ACTACAGTATCCCTAAAGAGGGAAGAGGACGGGGTGGGGTGGGGGGGGTGGAGAAAACCTGCTCAGTCCTGCTACTCAGGAATACAGCTGATAACCCACAGCTGGTTGGGGCTACTACAGTGGTAACCAGCACAATACAGTGGTTGGGGCTACTACAGTGGTAACCAGCACAATATTGACGTCTCCTACACACCAGGCA-TCCTTTGAGAGCTTTCTGTTACTACAAACGTCTGTCTTC------TATGCTGTTGCTATGACTTTATAGTCAAGAAAGTATAATAGTTTGTCAAACACCATTC i mm10.chr15 C 0 C 0 e canFam3.chr10 40967605 1 - 69331447 I a score=189133.000000 s hg38.chr22_KI270876v1_alt 198676 63 + 263666 agacagaatgcatcagaaccagatttg-gacccagttaatttggttccaaag----cttgtgccatta s panTro4.chr22 34578974 63 + 49737984 agacagaatgcatcagaaccaggtttg-gacccagttaatttggttccaaag----cttgtgccatta i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30998246 63 + 46535552 agacagaatgcatcagaaccagatttg-gacccagttaatttggttccaaag----cttgtgccatta i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100551556 63 - 115148730 agacagaatgcatcagaaccagatttg-gacccagttaatttgattccaaag----cttgtgccatta i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80696526 67 + 95678458 aaacagaatgcatcagaaccagatttg-gacccagttaatttggtcccaaaatAATTTGGTGCCATTA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81123086 67 - 96509753 aaacagaatgcatcagaaccagatttg-gacccagttaatttggtcccaaaataatttggtgccatta i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76379864 67 + 90941950 AAACAGAATGCATCAGAACCAGATTTG-GACCCAGTTAATTTGGTCCCAAAATAATTTGGTGCCATTA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18648123 67 + 33263144 aaacagaatgcatcagaaccagatttg-gatccagttaatttggtcccaaaataatttggtgccatta i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198352805 63 + 210400635 agaccaaatgcgtcagaaccagatttg-gacccagttaatttgtttccaaag----cctgagccatta i calJac3.chr1 C 0 C 0 s mm10.chr15 77187631 48 + 104043685 AAA------GCACACCAACCAGA----------AGTAGGTGTAGTTCTACAG----GCTAAGCCACCA i mm10.chr15 C 0 I 10369 s canFam3.chr10 40967606 63 - 69331447 AGCCAGAATGGAGCAGAGGCAGATCTGAAACCCACTCCATGTAGTTCTAAAT----CCTGCGCCATG- i canFam3.chr10 I 1 C 0 a score=923096.000000 s hg38.chr22_KI270876v1_alt 198739 342 + 263666 aagcactactgcCTCAATAGTACAAA----------------------------GCAC--------TGGTCCCTGCGATGTGAGAGAGAATAGCTG-ATGTCAGCT------AGAGTTCTACCACTATAAATT-CTATAGTTACTAAGTATTCCGT-TACTG-A--AAAAAATCACAGGT--AAAAAAAC--CTCTAGA-----------atttgacaaatatttattgaacaccattcattattctagacactgaagataatagcagcgaatacaccagacaaaaaactctAAAAGAGGAGACAGGTGGGAAAAA---AAGTTTTTATTTtacatacatata--catact-actactactactactacacacacacacacacacacacacacacacacacacacacGGAG s panTro4.chr22 34579037 336 + 49737984 aagcactactgcCTCAATAGTACAAA----------------------------GCAC--------TGGTCCCTGCGATGTGAGAGAGAATAGCTG-ACGTCAGCT------AGAGTTCTGCCACTATAAATT-CTATAGTTACTAAGTATTCCGT-TACTG-A--AAAAAATCACAGGT--AAAAAAAC--CTCTAGA-----------atttgacaaatatttattgaacagcattcattattctagacaccgaagataacagcagcgaataaaccagacaaaaaactctAAAAGAGGAGACAGGTGGGGAAAA---AAGTTTTTATTTTACATACATATA--CATACT-ACTACTACTACTACTacacacacacacacacacacatacacacacacaca------GAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30998309 320 + 46535552 aagcactactgcCTCAATAGTACAAA----------------------------GCAC--------TGGTCCCTGCGATGTGAGAGAGAATAGCTG-ATGTCAACT------AGAGTTCTACCACTATAAATT-CTATAGTTACTAAGTATTCCGT-TACTG-A--AAAAAATCACAGGT--AAAAAAAC--CTCTAGA-----------atttgacaaatatttattgaacaccattcattattctagacactgaagat-acagcagcaaacaaaccagacaaaaaactctAAAAGAGGAGACAGCTGAGAAAAA---AAGTTTTTATTTTACATACATATA--CATACT-ACTACTACTACT---------------acacacacacacacacacacaca------GAG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100551619 327 - 115148730 aagcactactgcCTCAATAGTACAAA----------------------------GCAC--------TGGTCCCTGCGATGTGAGAGAGAATAGCTG-ATGTCAACT------AGAGTTCTACCACTATAAATT-CTATAGTTACTAAGTATTCCGT-TACTG-A--AAAAAATCACAGGT--AAAAAAAC--CTCCAGA-----------atttgacaaatacttattgaacaccattcattattctagacactgaagat-acagcagcgaataaaccagacaaaaaactctAAAAGAGGAGACCGGTGAGAAAAA---AAGTTTTTATTTTacatacataca--catact-actactactactactacta--------ctacacacacgcgcacacacaca------GAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80696593 335 + 95678458 AAGCACTACTGCCTCAATAACACAAA----------------------------GCAC--------TGGTCCCTGCGATGTGACAGAGAATGGCTG-ATGTCAACT------AGAGTTCTACCACTATAAATT-CTATAGTTACAAAGTATTCCGT-TACTG-A--AAAAAATCACAGGT--AAAAAAAA--TTCTGGA-----------atttgacaaatatttattgaataccagtcatcattctagacactgaagat-acagcagtgaataaaccagacaaaaatctctAAAGGAGGAGACGGGCAAGAAAA----AAGTTTTTATTTTACATACATATC--CTTACTCcacacacacacacacacacacacacacacacacacacacacacacacaca------GAG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81123153 335 - 96509753 aagcactactgcctcAATAACACAAA----------------------------GCAC--------TGGTCCCTGCGATGTGACAGAGAATGGCTG-ATGTCAACT------AGAGTTCTACCACTATAAATT-CTATAGTTACAAAGTATTCCGT-TACTG-A--AAAAAATCACAGGT--AAAAAAAA--TTCTGGA-----------atttgacaaatatttattgaataccagtcatcattctagacactgaagat-acagcagtgaataaaccagacaaaaatctctaaaggaggagacgggcaagaaaa----aagTTTTTATTTTACATACATATC--CTTACTCcacacacacacacacacacacacacacacacacacacacacacacacaca------GAG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76379931 321 + 90941950 AAGCACTACTGCCTCAATAGTACAAA----------------------------GCAC--------TGGTCCCTGCGATGTGACAGAGAATGGCTG-ATGCCAACT------AGAGTTCTACCACTATAAATT-CTGTAGTTACAAAGTATTCCGt-tactg-a--aaaaaatcacaggt--aaaaaaaa-CTTCTgga-----------atttgacaaatatttattgaataccagtCATTATTCTAGACACTgaagat-acagcagtgaataaacCAGACAAAAATCTCTAAAGGAGGAGACAGGCTagaaaaa-agaagtttttattttacatacatata--cttact------------------acacacacacacacacacacacacacacacaca------gag i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18648190 322 + 33263144 aagcactactgcctcAATAGTACAAA----------------------------GCAC--------TGGTCCCTGCGATGTGACAGAGAATGGCTG-ATGTCAACT------AGAGTTCTACCACTATAAATT-CTATAGTTACAAAGTATTCCGT-TACTGAA--AAAAAATCACAGGT--AAAAAAAAACTTCTGGA-----------atttgacaaatatttattgaataccagtcattattctagatactgaagat-acagcagtgaataaaccagacaaaaatctctAAAGGAGGAGACAGGTGAGAAAA----AAGTTTTTATTTTACATACATATA--CTTACT----------------acacacacacacacacacacacacacacacacaca------GAG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198352868 331 + 210400635 aAGCACTTCTGCCTCAACAGTACAAA----------------------------GTAC--------TGGTCCCTGTGATGTG--AGAGAATGGCTG-ACATCAACC------AGCGTTCTACCACTATAAATT-CTATAGTTATTGAGTATTCCCCATACTG-A--AAAAAATAACAGGTTAAAAAAAAA--CTCCAGAATTTAGTACCTatttgacaaatatttattgagcaccattcattattctagtcgctgaagct-atagcagtgaatgcaccagacaaaaatctctAAAAGAGGAGACAGGTGAGGGAAAAAAAAAGATTTATTTCacatacatatatctatact----------------------acacaaatacatacacacgcacacacaca------GAA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40967669 373 - 69331447 AAGCTCTACTGATTCTGCAACACAAACCAGCGTTTGCACAGGACAAGTGCATTTGCACAGGACAAGTGGTCCCTAGTCAATCAAGGAGAAGGGCTGAATGACAAATACAAAGAAAGTTCCACC-CTATAAATTCCTATAGTTACTGAGTATTCCCT-TGTTA-ATGAAAAAGTAACAAGT---AGAAAAC--CTCCAGAATTTGAcacccatttgacaaatatttactaaacaccattcactatactagacactggggag-aaagcaggaaacaaaccagata------tctctttggagagacaggtagtaaaaa---acactt---ttttaaaaagattta--tttatt---------tattcatagacacacacagagagagaggcagagacacaggca------gag i canFam3.chr10 C 0 I 1969 e mm10.chr15 77187679 10369 + 104043685 I a score=1659490.000000 s hg38.chr22_KI270876v1_alt 199081 582 + 263666 TTTGTTTTGTTTTTAAAGATACAGGGTCTCAAgccaggcgcagtggctcactcctctaatcccagcactgtgggaggccgaggttggtggatcccctaaggtcaagag-ttcaagaccagcctggcgaacacggtgaaaccctgtctctact-aaaaatacaaaa-aattagccgagcatggtggtatggacctttaaacccagctactcaggaggctgaggctggagaatcacttgaacccaggaggcgatagctgcagtgagccgagatcatgtcattgcactccagcctgggtgacaagagtgaaactccatctaaataaat--aataaaataa------------------------------aataaagatacagggtctcgctctgtcacccaggatggagtgcagtctgcacaattagagctcactgcagctttgacctcctgggctcaagcaatcctcttgtctcaacctccaagtagccaggactacaggtgcatgccatctcccaagcagctaggactacaggtgtgtcccaccaaccctggctaatttttaaacttgcttttgtagagat-----agggtaccactatgttgcccatgctggtcttgaact s panTro4.chr22 34579373 582 + 49737984 TTTGTTTTGTTTTTAAAGATACAGGGTCTCAAgccaggcgcagtggctcactcctctaatcccagcactgtgggaggccgaggttggtggatcccctaaggtcaagag-ttcaagaccagcctggcgaacacggtgaaaccctgtctctact-aaaaatacaaaa-aattagctgggcatggtggtatggacctttaaacccagctactcaggaggctgaggctggagaatcacttgaacccaggaggcaatagctgcagtgagccgagatcatgtcattgcactccagcctgggtgacaagagtgaaactccatctaaataaat--aataaaataa------------------------------aataaagatacagggtctcgctctgtcacccaggatggagtgcagtctgcacaattagagctcagtgcagctttgacctcctgggctcaagcaatcctcttgtctcagcctccaagtagccaggactacaggtgcatgccatctcccaagcagctaggactacaggtgtgtcccatcaaccctggctaatttttaaacttgcttttgtagagat-----agggtaccactgtgttgcccaggctggtcttgaact i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30998629 581 + 46535552 TTTGTTTTGTTTTTAAAGATACAGGGTCTCAagccaggcgcagtggctcactcctgtaatcccagcactgtgggaggccgaggttggtggatcccctaagatcaagag-ttcaagaccagcctggtgaacacggtgaaa-cctgtctctact-aaaaatacaaaa-aattagccgagcatggtggtatgcacctttaaacccagctactcaggaggctgaggctggagaatcgcttgaacccaggaggtgatggttgcagtgagccgagatcatgtcattgcactccagcctgggtgacaagagtgaagctccatctaaataaat--aataaaataa------------------------------aataaagatacagggtctcactctgtcgtccaggatggagtacagtctgcacaattagagctcactgcagctttggtctcctggtctcaagcaatcctcttgtctcagcctccaagtagccaggactacaggtgcatgccatctcccaagtagctaggactacaggtgtgtcccaccatccctggctaatttttaaacttgcttttgtagagat-----ggggtaccactatgttgcccatgctggtcttgaact i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100551946 581 - 115148730 TTTGTTTTGTTTTTAAAGATACAGGGTCTCAAgccaggcgcagtggctcactcctgtaatcccagcactgtgggaggccgaggttggtggatcccctaaggtcaagag-ttcaagaccagcctggcgaacatggtgaaaccctgtctctact-aaaaatacaaaa-aattagccgagcatggtggtatgcacctttaaacccagctactcaggaggccgaggctggagaatcgcttgaacccaggaggcgatggttgcagtgagccgagatcatgtcattgcactccagcctgggtgacaagagtgacgctccatc-aaataaat--aataaaataa------------------------------aataaagatacagggtctcactctgtcgcccaggatggagtgcagtctgcacaatcagagctcactgcagctttgacctcctgggctcaagcaatcctcttgtctcagcctccaagtagccaggactacaggtgcatgccatgtcccaagtagctaggactacaggtgtgtcccaccatccctggctaatttttaaacttgcttttgtagagat-----ggggtaccactatgttgcccatgctggtcttgaact i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80696928 591 + 95678458 TGTGTTTTGTTTTTAAAGATACAGGGTCTCAggcccggctcagtggctcactcctgtaatcccagcactgcgggaggccgaggtgggcggatcacctgaggtcaagagtttcaagaccacactggccaacatggtgaaaccctgtctttact-aaaaatacaaaaaaattagccgagcatggtggtgtgcaactttaaacccagatactcaggaggctgacgctggagaatcgcttgaacccaggaggtgatggttgcagtgagccaagatcatgtcattgcactccagcctgggcgacaagagtgaaactccatctaaataaat--aataaaataaaataaaat----------------------aaTAAAGATGCAACgtctcactccgtcacccatgatggagtgcagt-ggcacaatcagagctcatcacagctttgacctcctgagctcaagcaatcctcttgtctcagcctccaagtagccaggactacagatgcatgccatctcccgagtagctaggactacaggtgtgtgccaccatccctggctaaattttaaacttgcttttgtagagat-----gggatcccactatgttgcccaggctggtcttgaact i rheMac3.chr10 C 0 M 196 s macFas5.chr10 81123488 591 - 96509753 TGTGTTTTGTTTTTAAAGATACAGGGTCTCAggcccggctcagtggctcactcctgtaatcccagcactgcgggaggccgaggtgggcggatcacctgaggtcaagagtttcaagaccacactggccaacatggtgaaaccctgtctttact-aaaaatacaaaaaaattagccgagcatggtggtgtgcaactttaaacccagatactcaggaggctgacgctggagaatcgcttgaacccaggaggtgatggttgcagtgagccaagatcatgtcattgcactccagcctgggcgacaagagtgaaactccatctaaataaat--aataaaataaaataaaaT----------------------AATAAAGATGCAACgtctcactccgtcacccatgatggagtgcagt-ggcacaatcagagctcatcacagctttgacctcctgagctcaagcaatcctcttgtctcagcctccaagtagccaggactacagatgcatgccatctcccgagtagctaggactacaggtgtgtgccaccatccctggctaaattttaaacttgcttttgtagagat-----gggatcccactatgttgcccaggctggtcttgaact i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76380252 584 + 90941950 tgtgttttgtttttaaagatacaggGTCTCGGGCCcagctcagtggctcactcctgtaatcccagcactgtgggaggccaaggtgggcggatcacctgaggtcaagagtttcaagaccacactggccaacatggtgaaaccctgtctttactaaaaaatacaaaacaattagccgagcatggtggtgtgcaacttTAAACCCagatacacaggaggctgaggctggagaatcgcttgaacccaggaggtgatggttgcagtgagccaagatcatgtcattgcactccagcctgggtgacaagagtgaaactccatataaataaat--aataaaataa------------------------------aataaagatgcaaggtctcactccgtcacccacgatggagtgcagt-ggcacaatcagagctcatcacagctttgacctcctgagctcaagcagtcctcttgtctcagcctccaagtagccaggactacagatgcatgccatctcccaagtagctaggactacaggtgtgtgccaccatccctggctaaattttaaacttgcttttgtagagat-----gggatcccactatgttgcccaggctggtcttgaact i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18648512 613 + 33263144 TGTGCTTTGTTTTTAAAGATACAGGGTCTCAggcccggctcagtggctcactcctgtaatcccagcactgtaggaggccgaggtgggcagatcccctgaggtcaagagtttcaagaccacactggccaacatggtgaaaccctgtctttact-aaaaatacaaaaaaattagccgagcatggtggtgtgcaactttaaacccagatactcaggaggctgaggctggagaatcgcttgaacccaggaggtgatggttgcagtgagccaagatcatgtcattgcactccagcctgggcgacaagagtgaaactccatctaaataaaT--aataaaataaaataaaataaaataaaataaaataaaataaaataaagatgcaaggtctcactccatcacccacgatggagtgcagt-ggcacaatcagagctcatcacagctttgacctcctgagctcaagcaatcctcttgtctcagcctccaagtagccaggactacagatgcatgccatctcccgagtagctaggactacaggtgtgtgccaccatccctggctaaattttaaacttgcttttgtagagat-----gggatcccactatgttgcccaggctggtcttgaact i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198353199 596 + 210400635 CTTGTTTTGTTTTTAACGATACAGGGTCTCAggccaggcacagttgtccacacctgtaatcccagcactgtgggagggc---gtgggaagatcacctgaggtcaggag-ttcaagaccagcctggccaacatggggaaaccctgtctctact-aaaaatacaaaa-agttagccaggcctggaggtacacacctgtaaacccagctacttggatgcctaaagcaggagaa-------aacctgggaggcaaaagttgcagtgagccaagatcatgccattgtactccaacctgggcaacaagagtaaaattccatctaaataaataaaataaaataaaataaaataaaaataaatta----------aataaagacacagggtctcactctgtcacccaggatggagtg-agt-ggcactatcaccgctcactgcagctttgacctcctaggctcacgcaatcat-ttgtctcagcctccaagtaggcaggagtacaggtgcgtgccacctcctgagtagctaggactacaggtgtgtgccaccatgcccggctaatttttaaacttgcttttgtagagatgggggggggtcccattatgttgcccaggctggtctcgaact i calJac3.chr1 C 0 C 0 e mm10.chr15 77187679 10369 + 104043685 I e canFam3.chr10 40968042 1969 - 69331447 I a score=145674.000000 s hg38.chr22_KI270876v1_alt 199663 83 + 263666 cctggcctcaaggagttcctcccaccttggcctcccaaagtcttgggattatagggataaaccaccatgcatggccTGT------------TTTT s panTro4.chr22 34579955 83 + 49737984 cctggcctcaaggagttcctcccaccttggcctcccaaagtcttgggattataggggtaaaccaccatgcatggccTGt------------tttt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30999210 90 + 46535552 ccttgcctcaaggagttcctctcaccttggcctcccaaagtcttgggattataggggtaaaccaccatgcatggccTGttttttta-----tttt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100552527 90 - 115148730 cctggcctcaaggagttcctcccaccttggcctcccaaagtcttgggattataggggtaaaccaccatgcatggccTGTTTTTTTA-----TTTT i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81124079 76 - 96509753 cctggcctcaaggagttcctcctaccttggcctcccaaagtcttgggattat-------------------cggcctgtttttttattttttttt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76380836 73 + 90941950 cctggcctc-aggagttcctcctaccttggcctcccaaagtcttgggattat-------------------cagcctgttttttta--ttttttt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18649125 73 + 33263144 cctggcctcaaggagcttctcctaccttggcctcccaaagtcttgggattat-------------------cggcctgttttttta---tttttt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198353795 83 + 210400635 cctggcctcaaggagctccttccaccttggcctcccaaagtcctgggattatagggttaaaccaccatgcatggccTGTTTTT------------ i calJac3.chr1 C 0 C 0 e mm10.chr15 77187679 10369 + 104043685 I e canFam3.chr10 40968042 1969 - 69331447 I e rheMac3.chr10 80697519 196 + 95678458 M a score=174223.000000 s hg38.chr22_KI270876v1_alt 199746 108 + 263666 TTATTTTTTATTT----------------ATATtgtcacccaggctggagtgcagaggcacgatctcagctcactgcaagctccgcctcccaggttcacatcattctcctgcctcagcctccag s panTro4.chr22 34580038 108 + 49737984 ttattttttattt----------------atattgtcacccaggctggagtgcagaggcataatctcagctcactgcaagctccgcctcccgggttcacatcattctcctgcctcagcctccag i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30999300 108 + 46535552 ttattttttattt----------------atattgtcacccaggctggagtgcagaggcacgatcttggctcactgcaagctccgcctcccgggttcacatcattctcctgcctcagcctccag i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100552617 108 - 115148730 GTATTTTTTATTT----------------ATATtgtcacccaggctggagtacagaggcatgatctcggctcactgcaagctccgcctcccgggttcacatcattctcctgcctcagcctccag i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81124155 124 - 96509753 ttatttttttttttttgagacggagtctcactctgtccctgaggctggagtgcagtggcgcgatctcggttcactgcaagttccacctcccgggttcacgccattctcctgcctcagcctccag i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76380909 124 + 90941950 ttatttttattttttcgagacagagtctcactctgtccctgaggctggagtgcagtggcgcaatctcggttcactgcaagttccacctcccgggttcacaccattctcctgcctcagcctccag i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18649198 124 + 33263144 ttatttttattttttcgagacagagtctcactctgtccctgaggctggagtgcagtggcacgatctcggttcactgcaagttccacctcccgtgttcacaccattctcctgcctcagcctccag i chlSab2.chr19 C 0 C 0 e mm10.chr15 77187679 10369 + 104043685 I e canFam3.chr10 40968042 1969 - 69331447 I e calJac3.chr1 198353878 0 + 210400635 C e rheMac3.chr10 80697519 196 + 95678458 M a score=446629.000000 s hg38.chr22_KI270876v1_alt 199854 187 + 263666 agtggctgggactacaggcgcccgccaccacacccggctaattttttgtatttttagtagagatggggtttcaccatgttagccaggatggtctcaatctcctgacctcgtgatccacccgccttggcctcccaaagtgctgggattacaggcatgagccactgtgcctggccGTATGGCCTGTTTT s panTro4.chr22 34580146 187 + 49737984 agtggctgggactacaggcgcccgccaccacacccggctaattttttgtatttttagtagagacggggtttcaccatgttagccaggacggtctcaatctcctgacctcgtgatccgcccgcctcggcctcccaaaatgctggaattacaggcatgagccactgtgcctggccGTATGGCCTGTTTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30999408 187 + 46535552 agtggctgggactataggtgcccgccaccacacccggctaattttttgtatttttagtagagacagggtttcaccatgttagccaggatggtctcgatctcctgacctcgtgatccgcccccctcagcctcccaaagtgctgggattacaggcatgagccaccgtgcctggccATATGGCCTATTTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100552725 187 - 115148730 agtggctgggactacaggtgcccgccaccacacccgaatagttttttgtatttttagtagagatggggtttcaccatgttagccaggatggtctcgatctcctgacctcgtgatcggcccacctcggcctcccaaagtgctgggattacaggcgtgagccaccgtgtctggccGTATGGCCTGTTTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80697715 187 + 95678458 agtggctgggactacaggcgcccgccaccacacccagctaattttttgtatttttagtagagacagggtttcaccgtgttagccaggatggtctctatctcctgatctcgtgatctgcctgcctcagcctcccaaagtgctgggattacaggcatgagccagcgtgcctggccACCTGGCCTGTTTA i rheMac3.chr10 M 196 C 0 s macFas5.chr10 81124279 187 - 96509753 agtggctgggactacaggcacccgccaccacacccagctaattttttgtatttttagtagagacagggtttcaccgtgttagccaggatggtctctatctcctgatctcgtgatctgcctgcctcagcctcccaaagtgctgggattacaggcatgagccagcgtgcctggccACCTGGCCTGTTTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76381033 187 + 90941950 agtggctgggactacaggtgcccgccaccacactcagctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctctatctcctgatctcgtgatctgcctgcctcagcctcccaaagtgctgggattacaggcatgagccaccgtgcctggccacctgGCCTGTTTG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18649322 187 + 33263144 agtggctgggactacaggtgcccgccaccacacccagctaattttttgtatttgtagtagagacggggtttcaccgtgttagccaggatggtctgtatctcctgatctcgtgatctgcctgccttggcctcccaaagtgctgggattacaggcatgagccaccgtgcctggccACCTGGCCTGTTTT i chlSab2.chr19 C 0 C 0 e mm10.chr15 77187679 10369 + 104043685 I e canFam3.chr10 40968042 1969 - 69331447 I e calJac3.chr1 198353878 0 + 210400635 C a score=2416719.000000 s hg38.chr22_KI270876v1_alt 200041 815 + 263666 TATAATATTTAGAAGATAAATGCTATGAAAAatttaaagtaaaatggctttcaaaaggccttattgaataggaaacatttgagcaaaaatttgaaggccaggaggaagaca---tgagtatatctggagagaagcattacaggcagaagaaacaagtacagtaagccctccatatttgtgggttctgcatccctggattcaaccaaccatgaatgggaaatatttggggcag-----gagaaataattcgtactggatatgtacagtctttttttccttgtcacc-------gtaaatcgtgttccagaaacaatataacagctatttacataaaatttacacttcattaggtactataaacactccagagattatttaaagtatacagaagaat-atgtgtaggttatatgcaaatgccacactattttatatcagggacttgagcatctgcggatttgggtatctttaagaggctctggaaccaaccc-----cctcatgaataccatggaacagctgtacaaagtgcctggcaaatttgaggaatggccaaaaggcctaagtagct--------gtgagaaatgagaacaggaggagatgaaagtcaaacaagtacctaggagcaggcttgactggagccttgtggggactctagcttttcttctgagcgaaacacatcagtggattttgtgcatgatcagatttatattttcaaaggattatgtcagatgttgtgattagaataaattcttcagtgtcaatagtggagatagcgagaccaggtagcagactattacaaaaacctgggcaagagaagatggaataccgaaccaggatagaa s panTro4.chr22 34580333 815 + 49737984 TATAATATTTAGAAGATAAATGCTATGAAAAatttaaagtaaaatggctttcaaaaggccttgttgaataggtaacatttgagcaaaaatttgaaggccaggaggaagaca---tgagtatatctggagagaagcattacaggcagaagaaacaagtacagtaagccctccatatttgtgggttctgcatccctggattcaaccaaccatgaatgggaaatatttggggcag-----gagaaataattcgtactggatatgtacagtctttttttccttgtcact-------gtaaatcgtgttccagaaacaatataacagctatttacataaaatttacacttcattaggtactataaacactccagagattatttaaagtatacaggagaat-atgtgtaggttatatgcaaatgccacactattttatatcaggtacttgagcatctgcggatttgggtatctttaagaggctctggaaccaaccc-----cctcatgaataccatggaacagctgtacaaagtgcctggcaaatttgaggaatggccaaaaggcctaagtagct--------gtgagaaatgagaacaggaggagatgaaagtcaaacaagtacctaggagcaggcttgactggagccttgtggggactctagcttttcttctgagcgaaacacatcagtggattttgtgcatgatcagatttatattttcaaaggattatgtcagatgctgtgattagaataaattcttcagtgtcaatagtggagatagtgagaccaggtagcagactattacaaaaacctgggcaagagaagatggaataccgaaccaggatagaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 30999595 812 + 46535552 TCTAATATTTGGAAGATAAATGCTATGAAAAatttaaagtaaaatggctttcaaaaggccttattgaataggtaacatttgagcaaaaatttgaaggccaggaggaagaca---tgagtatatctggagagaagcattacaggcagaagaaacaAGTAcagtaagccctccatagttgtgggttctgcatccctggattcaaccaaccatgaatgggaaatatttggggcag-----ggcgaataatccgtactggatatgtacagtctttttttccttgtcact-------gtgaatggtgttccagaaacaatataacagctatttacataaaatttacacttcattaggtaccataaacactccagagattatttaaagtatacaggagaat-atgtgtaggttatatgcaaatgccacactattttatatcaaggacttgagcatctgcggatttgggtatctttaagaggctctggaaccaaccc-----cctcatgaataccatggaacagctgTACAAAgtgcctggcaaatttgaggaacggccaaaaggcctaagtagct--------gtgagaaatgagaacaggaggagatgaaagtcaaacaagtacctaggagcaggcttgactggagcctt---gggactctagcttttcttctgagcgaaacacatcagtggattttgtgcatgatcagattcatattttcaaaggattatgtcagatgctgtgattcgaataaattcttcagtgtcaatagtggagagagtgagaccaggcagcagactattataaaaatctgggcaagagaggatggaatacagaaccaggatcgaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100552912 815 - 115148730 TATAATATTTAGAAGATAAATGCTATGAAAAatttaaagtaaaatggctttcaaaaggccttattgaataggtaacatctgagcaagaatttgaaggccaggaggaagaca---tgagtatatctggagagaagcattacaggcagaagaaacaAGTAcagtaagccctccatatttgtgggttctgcatccctggattcaaccaaccatgaatgggaaatatttggggcag-----ggggaataatccgtactggatatgtgcagtctttttttccttgtcact-------gtgaatggtgttccagaaacaatataacagctatttacataaaatttacacttcattaggtactataaacactccagagattatttaaagtatacaggagaat-atgtgtaggttatatgcaaatgccacaatattttatatcagggacttgagcatctgcggatttgggtatctttaagaggctctggaaccaaccc-----cctcatgaatatcatggaacAGCCGTACAAAgtgcctggcaaatttgaggaacggccaaaaggcctaagtagct--------gtgagaaatgagaacaggaggagatgaaagtcaaacaagtacctaggagcaggcttgactggagccttgtggggactccagcttttcttctgagcgaaacacatcagtggattttgtgcatgatcagatttatattttcaaaggattatgtcagatgctgtgattagaataaattgttcagtgtcaatagtggagacagggagaccaggtagcagactattataaaaatctgggcaagagagaatggaatacggaaccaggatagaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80697902 822 + 95678458 TATAATATTTGGAAGATAAATGCTATGGAAAatttaaagtaaaatggctttcaaaaggccttattgaataggtaacatttgaggaaaaatttgaaggccaggaggaagaca---cgggtatatttggagaaaagcattacaggcagaagaaacaagtacagtaagccctccatatttgtgggttctgcatccctggattcaaccaaccatggatgggaaatatttggggcag-----ggggaataatccgtactgaatatgtaccatctttttttccttgtcactacgaatggtgaatggtgttccagaaacaatttaacagttatttacacagaatttacac-tcattaggtattataaatactccagagatgatttaaagtatacaggagaat-atgtgtaggttatatgcaaatgccacactattttctatcagggactcgagcatctacggattt-ggtatctttaagaggccctggaaccaactc-----cctcatgaataccatggaacagctgtgcaaagtgcctggcaaatttgaggaacagccaaaaggcctaagtagctgaaggagagtgaggaatgagaacatgaggagatgaaagtcaaacaagtacccaggagtaggcttgactggagctttgtggagactctagcttttcttctgagtgaaacacatcagtggatttggtgcatgctcagatttatattttcaaaggattatgtcagatgctgtg------ataaattcttcagcgtcaatagtggagatagggagaccaggtagcagactattataaaaatctgggcaagagaagatggaatacagaaccaggacagaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81124466 822 - 96509753 TATAATATTTGGAAGATAAACGCTATGGAAAatttaaagtaaaatggctttcaaaaggccttattgaataggtaacatttgaggaaaaatttgaaggccaggaggaagaca---cgggtatatttggagaaaagcattacaggcagaagaaacaagtacagtaagccctccatatttgtgggttctgcatccctggattcaaccaaccatggatgggaaatatttggggcag-----ggggaataatccgtactgaatatgtaccatctttttttccttgtcactatgaatggtgaatggtgttccagaaacaatttaacagttatttacacagaatttacac-tcattaggtattataaatactccagagatgatttaaagtatacaggagaat-atgtgtaggttatatgcaaatgccacactattttctatcagggactcgagcatctacggattt-ggtatctttaagaggccctggaaccaactc-----cctcatgaataccatggaacagctgtgcaaagtgcctggcaaatttgaggaacagccaaaaggcctaagtagctgaaggagagtgaggaatgagaacatgaggagatgaaagtcaaacaagtacccaggagtaggcttgactggagctttgtggagactctagcttttcttctgagtgaaacacatcagtggatttggtgcatgctcagatttatattttcaaaggattatgtcagatgctgtg------ataaattcttcagcgtcaatagtggagatagggagaccaggtagcagactattataaaaatctgggcaagagaagatggaatacagaaccaggacagaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76381220 825 + 90941950 TATAATATTTAGAAGACAAATGCTAtggaaaatttaaagtaaaatggcTTTCAAAAGGCCTTATTGAATAGGTAACATTTGAGGAAAAATTTGAAGGCCAGGAGGAAGACACGGCGGGTATATTTGGAGAAAAGCATTACAGGCAGAAGAAACAAGTACAGT-AGCCCTCCATATTTGTGGGTTCTGCATccctggattcaaccaaccatggatggGAAATATTTGGGGCAG-----GGGGAATAATCCGTACTGAATATGTAccatctttttttccttgtcacTATGAATGGTGAATGGTGTTCCAGAAACAATTTAACAGTTATTTACACAGAATTTACAc-tcattaggtattataaatactccagagatgttttaaagtatacaggagaat-atgtgtaggttatatgcaaatgccACACTATTTTCTATCAGGGACTCGAGCATCTATGGATTTGGGTATCTTTAAGAGGCCCTGGAACCAACTC-----CCTCATGAATACCATGGAACAGCTGTGCAAAGTGCCTGGCAAATTTGAGGAACAGCCAAAAGGCCTAAGTAGCTGAAGGAGAGTGAGAAATGAGAACACGAGGAGATGAAAGTCAAACAAGTACCCAGGAGTAGGCTTGACTGGAGCTTTGTGGAGACTCTAGCTTTTCTTCTGAGTGAAACACATCAGTGGATTTGGTGCATGCtcagatttatattttcaaaggatTATGTCAGATGCTGTG------ATAAATTCTTCAGCGTCAAGAGTGGAGATAGGGAGACCAGGTAGCAGACTATTATAAAAATCTGGGCAAGAGAAGATGGAATACAGAACCAGGACAGaa i papAnu2.chr10 C 0 M 555 s chlSab2.chr19 18649509 821 + 33263144 TATAATATTTTGAAGATAAATGCTATGGAAAatttaaagtaaaatggctttcaaaaggccttattgaataggtaacatctgaggaaaaatttgaaggccaggaggaagaca---cgggtatatttggagaaaagcattacaggcagaagaaacaagtacagtaagccctccatatttgtgggttctgcatccctggattcaaccaaccatggatgggaaatatttggggcag-----ggggaataatccgtactgaatatgtaccatctttttttccttgtcactatgaatggtgaatagtgttccagaaacaatttaacagttattcacacagaatttacac-tcattaggtattataaatactccagagatgatttaaagtatacaggagaat-atgtgtaggttatatgcaaatgccacactattttctatcagggactcgagcatctatggatttgggtatctttaagaggccctggaaccaactc-----cctcatgaataccatggaacagctgtgaaaagtgcctggcaaatttgaggaacagccaaaaggcctaagtagctgaaggagagtgagaaatgagaacacgaggagatgaaagtcaaacaagtacccaggagtaggcttgactagagctttgtggaga--ctagcttttcttctgagtgaaacacatcagtggatttggtgcatgctcagatttatattttcaaaggattatgtcagatgctgtg------ataaattcttcagcgtcaatagtggagatagggagaccaggtagcagactattataaaaatctgggcacgagaagatggaatacagaaccaggacagaa i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198353878 838 + 210400635 TATAATATTTAGAAGATAAATGCTATTGAAAAGttaaaatagaaaggctttcaaaaggacttattgaataggtaacatttgagcaaaactctgaaggccagaaggaagaca---tgggtatatctggagaaaagcagtagaggcagaagaaacaAATATagtaagccctccattattgtgggttctgcatccctggattcaaccaaccatggatgagaaatatttgggggaaggggcggggaatagtctgtactgaatatgta--ggtcttttttcattgttactatgaatggtgaatggtgttctggaaacaatataacagctgtttacaaagaatttatacttcattaggtattataaataatccagagataatttaaagtatacaggagaataatgtgtaggttatataccaatgccacactattttgtatcagagacttgagcatctgcagatctgggtatctttaagaggtcctggaaccaatcccccCACCCCATGAATCCCATGGGAGAGCTGTACAAAgtgcctggcaaatttgaggaacagcaaaaaggcctaagtagctgaaggagagtgagaaatgtgaacaggaggaaatgaaagtcaaacaggtacctaggagcaggcttgactggagccttatggggactccagctttt-ttctgagtgaaacatatcagtggattttgtgcatgatgaaatttaaatgttcaaaggattatatcagatgctgtgattagaataaattcttcagtgtcactggtggagactgggagatcaggtagcagactaatataaaaatctggacaagaagggatggaatacgaaaccaggatagaa i calJac3.chr1 C 0 C 0 e mm10.chr15 77187679 10369 + 104043685 I e canFam3.chr10 40968042 1969 - 69331447 I a score=38338.000000 s hg38.chr22_KI270876v1_alt 200856 17 + 263666 gtggcagagctagtagg s panTro4.chr22 34581148 17 + 49737984 gtggcagagctagaagg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31000407 17 + 46535552 gtggcagagctagtagg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100553727 17 - 115148730 gtggcagagctagtagg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80698724 17 + 95678458 gtagcagagctagtagg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81125288 17 - 96509753 gtagcagagctagtagg i macFas5.chr10 C 0 C 0 s chlSab2.chr19 18650330 17 + 33263144 gtagcagagctagtagg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198354716 17 + 210400635 gaagtagcgctagtagg i calJac3.chr1 C 0 I 291 e mm10.chr15 77187679 10369 + 104043685 I e canFam3.chr10 40968042 1969 - 69331447 I e papAnu2.chr10 76382045 555 + 90941950 M a score=3822.000000 s hg38.chr22_KI270876v1_alt 200873 2 + 263666 at s panTro4.chr22 34581165 2 + 49737984 at i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31000424 2 + 46535552 at i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100553744 2 - 115148730 at i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80698741 2 + 95678458 at i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81125305 2 - 96509753 at i macFas5.chr10 C 0 C 0 s chlSab2.chr19 18650347 2 + 33263144 at i chlSab2.chr19 C 0 C 0 e mm10.chr15 77187679 10369 + 104043685 I e canFam3.chr10 40968042 1969 - 69331447 I e calJac3.chr1 198354733 291 + 210400635 I e papAnu2.chr10 76382045 555 + 90941950 M a score=2142426.000000 s hg38.chr22_KI270876v1_alt 200875 970 + 263666 gggcacggcagctcacgcctataatcccagcactttgagaggccaaggtcggtggatcacttgaggccaggaattcgagaccagcatggccaacatggcgaaaccctgtctctactaaaaatacaaaaattagctaggcatggtggcgcatacctgtaatcccagctactcaggtagccgactcacaagaatcgcttgaacctgagaggcggaggttgcagtgagc-cagatcatgccacggcactgcagcctgggcgac-agagcgaga------ctgagg-----------aaaaaaaaaaaaggaag---aagagctagt----atggattgaatttaggttatttttgaaaggcagaacctaaaggatttgctaattaacaggaccgcagtgagggagaaagaggagtccaggatgactaaggttttttttagctcaa--gtaacagaaagatgtcattatctgagaagaagaaaactgtgggtttagcaagtctgagggcagaggaaggcaagtaaaggccaggagctcagctttggacatgtcaagtttgaggtaactattatattacagatggaaatgtcaagtaggcagttagatatgagcttctagagagagttctagctagaggtatacatttgagagccaagaacatacagacagaatttaaCAcccagtgtatcatcagagtccactgggcccaacttttcttttcaagcagttcagttctacctgtaagaatttatactttatgatttttctttcttagaggtattccaaaaagaaaacagaaaaacgaaattgttactttaaaaat-aaactattttatcttgtaataatacatgtattccttggaccc-ttttataaacctaagattcactgtgaaattttagaagatctttatttttcctacatcttgaaacattctgacttttcagcaacttttacttttta---------actattcccagccatgGAaggaagggagggagggagggaag s panTro4.chr22 34581167 976 + 49737984 gggcacggcagctcacgcctataatcccagcactctgagaggccaaggtcggtggatcacttgaggccaggaattcgagaccagcatggccaacatggcgaaaccctgtctctactaaaaatacaaaaattagctaggcatggtggcacatacctgtaatcccagctactcaggtagctgacgcacaagaatcgcttgaacctgagaggcggaggttgcagtgagc-cagatcatgccacggcactgcagcctgggcgac-agagcaaga------ctgagg--------gaaaaaaaaaaaaaaggaagaataagagctagt----atggattgaatttaggttatttttgaaaggcaaaacctaaaggatttgctaattaacaagactgcagtgagggagaaagaggagtccaggatgactaaggttttttttggctcaa--gtaacagaaagatgtcattatctgagaagaagaaaactgtgggtttagcaagtctgagggcagaggaaggcaagtaaaggccaggagcccagctttggacatgtcaagtttgaggtaactattacattacagatggaaatgtcaagtaggcagttagatatgagcttctagagagagttctagctagaggtatacatttgagagccaagaacatacagacagaatttaaCAcccagtatatcatcagagtccactgggcccaacttttcttttcgagcagttcagttctacttgtaagaatttatactttatgatttttctttcttagaggtattccaaaaagaaaacagaaaaacaaaattgttactttaaaaat-aaactattttatcttgtaataatacatgtattccttggaccc-ttttataaacctaagattcactgtgaaattttagaagatctttatttttcctatatcttgaaacattctgacttttcagcaacttttacttttta---------actattcccagccatgGAaggaagggagggagggagggaag i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31000426 991 + 46535552 ggggacggcagctcatgcctataatcccagcactttgagaggccagggtgggtggatcacttgaggccaggaatttgagaccagcatggccaacatggcaaaaccctgtctctactaaaaatacaaaaattagctaggcatggtggcgcatacctgtaatcccagctactcaggtagctgatgcacaagaatcgcttgaacctgagaggcagaggttgcagtgcgc-cagatcatgccatggcactgcagcctgggtgac-agagcgagactctgtctggaa--------aaaaaaaaaaaaggaggaagaagaagagctagt----atggattgaatttaggttatttttgaaaggcagaacctaaaggatttgctaattaacaggactgcagtgagggagaaagaggagtccaggatgactaaggttttttttggctcaa--gtaacagaaagatgtcattatctgagaagaagaaaactgtgggtttagcaagtctgagggcagaggaaggcaagtaaaggccaggagttcagctttggacatgtcaagtttgaggtaactattatattacagatggaaatgtcaagtaggcagttagatatgagcttctagagagagttctagctagaggtagacatttgagagtcaagaacatacagacagaatttaaCAcccagtatatcatcagagtccactgggcccaacttttcttttcgagcagttcagttctacttgtaagtatttatactttatgatttttctttcttagaggtattccaaaaagaaaacagaaaaacaaaattgttactttaaaaat-aaactattttatcttgtaataatacatgtgttccttggaccc-ttttataaaccgaagattcattgtgaaattttagaagatctttatttttcctatatcttgaaacattctgacttttcagtaacttttactttttaactattcccactattcccagccatgGAaggaagggagggagggagggaag i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100553746 980 - 115148730 gggcatggcagctcacgcctataatcccagcactttgagaggccaaggtgggtggatcacttgaggccaggaattcgagaccagcatggccaacatggcgaaaccctgtctctaataaaaatacaaaaattagctaggcatggtggcgcatacctgtaatcccagctattcaggtagctgatgcgcaagaatcgctcaaacctgagaggcggaggtcgcagtgagc-cagatcatgccacagcactgcagcctgggcgac-agagcgagact----ctgagg------aaaaaaaaaaaaaaaaaggaagaagaagagctagt----atggattgaatttaggttatttttgaaaagcagaacctaaaggatttgctaattaacaggactgcagtgagagagaaagaggagtccaggatgactaaagttttttttggctcaa--gtaacagaaagatgtcattatctgagaagaagaaaactgtgggtttagcaagtctgagggcagaggaaggcaagtaaaggccaggagttcagctttggacatgtcaagtttgaggtaactattatattacagatggaaatgtcaagtaggcagttagatacgagcttctagagagagttctagctacaggtatacatttgagagtcaagaccatacagacagaatttaaTAcccaatatatcatcagagtccactgggcccaacttttcttttcgagcagttcagttctacttgtaagaatttatactttttgatttttctttcttagaggtattccaaaaagaaaacagaaaaacaaaattgttactttaaaaat-aaactattttatcttgtaataatacatgtgttccttggactc-ttttataaacctaagattcattgtcaaattttagaatatctttatttttcctatatcttgaaacattctgacttttcagcaacttttacttttta---------actattcccagccatAgaaggaagggagggagggagggaag i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80698743 965 + 95678458 gagcacggcagctcacatctataatcccagcactttgagaggccacggtgggtggatcacttgaggccaggaattcgagaccagcatggccaacaaggcgaaaccccgtctctactaaaaatataaaaattagctaggcgtggtggcacatacctataatcccagctactcaggtggctgacacataagaatcacttgaacctgagacgcggaggttgcagtgagc-gagatcatgccactgcactgcagcctgggcgac-agagcgagact----ctgtct---------aaaaaaaacaaaacaaaagaagaagagttagtaaaaacggattgaatttaggttatttttgaaaggcagaacctaaaggatttgctaattaacaggactggagtaagggagaaa---gagtccaggatgactaagg-ttttcttggctcaa--gtaacagaaagatgtcattatctgagaagaagaaaactgtgggtttagcaagtctgagggcagaggaaggcaagtaaaggccaggaattcggctttggacatgtcaagtttgaggtaagtattatattacagatggaaatgtcaagtaggcagttagaaatgagcttctagagagaggtctagctagaggtatacatttgagagtcaaga----acagacagaatttaacaccTAgtatatcatcagagtccactgggcccaacttttctttttgagcagttcagttccacttgtaagaatttatactttatgactttactttcttagaggtattccaaaaagaaaaccgcaaaataaaactgctactttaaaaat-aaactattttatcttgtaataatgtatgtgttccttggaccc-ttttataaacttaagattcattgtggaattttagaagatctttatttttcctacatcttgaaacattctgacttttcagcaacttttacttttta---------actattcccagccatggaaagaagggagggag--------g i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81125307 965 - 96509753 gagcacggcagctcacatctataatcccagcactttgagaggccacggtgggtggatcacttgaggccaggaattcgagaccagcatggccaacaaggcgaaaccccgtctctactaaaaatataaaaattagctaggcgtggtggcgcatacctataatcccagctactcaggtggctgacacataagaatcacttgaacctgagacgcggaggttgcagtgagc-gagatcatgccactgcactgcagcctggtcgac-agagcgagact----ctgtct---------aaaaaaaacaaaacaaaagaagaagagttagtaaaaacggattgaatttaggttatttttgaaaggcagaacctaaaggatttgctaattaacaggactggagtaagggagaaa---gagtccaggatgactaagg-ttttcttggctcaa--gtaacagaaagatgtcattatctgagaagaagaaaactgtgggtttagcaagtctgagggcagaggaaggcaagtaaaggccaggaattcggctttggacatgtcaagtttgaggtaagtattatattacagatggaaatgtcaagtaggcagttagaaatgagcttctagagagaggtctagctagaggtatacatttgagagtcaaga----acagacagaatttaacaccTAgtatatcatcagagtccactgggcccaacttttctttttgagcagttcagttccacttgtaagaatttatactttatgactttactttcttagaggtattccaaaaagaaaaccgcaaaataaaactgctactttaaaaat-aaactattttatcttgtaataatgtatgtgttccttggaccc-ttttataaatttaagattcattgtggaattttagaagatctttatttttcctacatcttgaaacattctgacttttcagcaacttttacttttta---------actattcccagccatggaaagaagggagggag--------g i macFas5.chr10 C 0 C 0 s chlSab2.chr19 18650349 967 + 33263144 gagcacggcagctcacacctataatcccagcactttgagaggccacagtgggtggatcacttgaggccaggaattcgagaccagcatggccaacatggcaaaaccccgtctctactaaaaatataaaaattagctaggcgtggtggcgcatacctgtaatcccagctactcaggtggctgacacataagaatcacttgaacctgagaggcggaggttgcagtgagc-gagatcatgccactgcactgcagcctgggcgac-agagcgagact----ctgtct-------aaaaaaaaaaaaaaacaaaagaagaagagttagtaaaaacggattgaatttaggttatttttgaaaggcagaacctaaaggatttgctaattaacaggactggagtaagggagaaa---gagtccaggatgactaagg-ttttcttggctcaa--gtaacagaaagatgtcattatctgagaagaagaaaactgtgggtttagcaagtctgagggcagaggaaggcaagtaaaggccaggaattcggctttggacatgtcaagtttgaggtaagtattatattacagatggaaatgtcaagtagacagttagatatgagcttctagagagaggtctagctagaggtatacatttgagagtcaaga----acagacagaatttaaCAcccagtatatcatcagagtccactgggcccaacttttctttttgagcagttcagttccacttgtaagaatttatactttatgacttttctttcttagaggtattccaaaaagaaaacagcaaaataaaactgttactttaaaaat-aaactattttatcttgtaataatgtatgtgttccttggaccc-ttttataaacttaagattcattgtgaaattttagaagacctttatttttcctacatcttgaaacattctgacttttcagcaACTTTTACTTTTTA---------ACTATTCCCAGCCATggaaagaagggagggag--------g i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198355024 947 + 210400635 gggcatggtggcgcacgcctataatctcagcactttgggagaccaaggtaggcggatcacctgaggtcggtagttcaagaccagcctgaccaacatgtagaaacctaatttctact--------aaaaattagctggacgtggtggcgcattcctgtaatcccagctacccaagaggctgaggcaggagaagtgcttgaacccagaaggcagaggctgcagtgagctgagatcgcgccactgcattccagcctgggcaacaagagcaaaact----ctatctcaaaaaaaaaaaaaaaaacaagaaaaagaagtagagctagtaaaaatggattgaatttaggttatttttgcaaggcagaacctaaaggatttgctaatt-acaggactggagtgagggagaaagaagagtccaggatgacttatg-attttttggcccaagggtaacagaaagatgtcattatctgagaa----aaaactgtgggtttagcaggtccaagaacagaggaaggcaagtaaaggccaggagttcagctttggacacttcaagttttaggtaactatgatattacagatggaaatgtcaagtaggcagttagatatgagcttctagagagaggtctagctagaggtaaacatttgagagtcaagaatatactgacagaatttaacaccTggtataccatcacagtacactgggcccaacttttccttttgagcagctcagttctacttgtaagaatttatactttataactttcctttcttagaggtattccaaaaagaaaaaagaaaaacaaaaatgttacttaaaaaataaaactattttatcctgtaataatacatgtgttccttggactctttttata-------------------aattttagaAAATCTTTATTTCTCCTGTATCTTCAAACATTCTGACTTTTCAAAAACTTTAACTTTTTAA--------ACTATTCCCAGCC--------AAGGGAGAGAG--------- i calJac3.chr1 I 291 C 0 e mm10.chr15 77187679 10369 + 104043685 I e canFam3.chr10 40968042 1969 - 69331447 I e papAnu2.chr10 76382045 555 + 90941950 M a score=314267.000000 s hg38.chr22_KI270876v1_alt 201845 126 + 263666 gaagaaaggagggaTAGGCAAAAAGGACAAAAACCATGAGGTATTATAAAAGGGATTAAA-----AGATATAGACAGCATTCAAATGTGATTGATGGTTACTGTAGGGGTAATATCTAATTAGTTGCATGA s panTro4.chr22 34582143 126 + 49737984 gaagaaaggaggCATAGGCAAAAAGGACAAAAACCATGAGGTATTATAAAAGGGATTAAA-----AGATATAGACAGCATTCAAATGTGATTGATGGTTACTGTAGGGGTAATATCTAATTAGTTGCATGA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31001417 126 + 46535552 gaggaaaggagggaTAGGCAAAAAGGACAAAAACCATGGGGTATTATAAAAGGTATTAAA-----AGATATAGACAGCATTCAAATGTGATTGATAGTTACTGTAGGGGTAATATCTAATTAGTTGCATGA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100554726 126 - 115148730 gaagaaaggagggataggcaaaaaggaCAAAAACCATGAGGTATTATAAAAGGGATTAAA-----AGATATAGACAGCATTCAAATGTGATTGATAGTTACTGTAGGGGTAATATCTAATTAGTTGCATGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80699708 126 + 95678458 gaagaaaggaaggagaggcaaaaaggaCAAAAACCACGAGATATTATAAAAAGGACTAAA-----AGATATAGACAGCGTTCAAATGTGATTCATAGTTATTGTAGGGGTAATATCGAATTAGTTGCATGA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81126272 126 - 96509753 gaagaaaggaaggagaggcaaaaaggaCAAAAACCACGAGATATTATAAAAAGGACTAAA-----AGATATAGACAGCGTTCAAATGTGATTCATAGTTATTGTAGGGGTAATATCGAATTAGTTGCATGA i macFas5.chr10 C 0 C 0 s chlSab2.chr19 18651316 126 + 33263144 gaagaaaggaaggagaggcaaaaaggaCAAAAACCACAAGATATTATAAAAAGGATTAAA-----AGATATAGACAGCGTTCAAATGTGATTCATAGTTATTGTAGGGGTAATATCGAATTAGTTGCATGA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198355971 111 + 210400635 ---------------GGGCAAAAAGAACAAAAATCATGAGGtattataaaaattattaaa-----aaatataGATAGCATTTGAATGTGATTGATAGTTACCACAGGGGTAATATCTAATTAGTTACATGA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40970011 129 - 69331447 GAGAATAGAAAGAAGATACACAAAGTAGAAAAA-CATAAAATACTGCAAAAAAGATTAAGAAAACAAACATGAACAGCATTCAAATGTGATCTGCGGTCATTGT-GGAGTGATATACAACTAGGTGCATGA i canFam3.chr10 I 1969 I 132 e mm10.chr15 77187679 10369 + 104043685 I e papAnu2.chr10 76382045 555 + 90941950 M a score=5096.000000 s hg38.chr22_KI270876v1_alt 201971 2 + 263666 AA s panTro4.chr22 34582269 2 + 49737984 AA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31001543 2 + 46535552 AA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100554852 2 - 115148730 AA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80699834 2 + 95678458 AA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81126398 2 - 96509753 AA i macFas5.chr10 C 0 C 0 s chlSab2.chr19 18651442 2 + 33263144 AA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198356082 2 + 210400635 AA i calJac3.chr1 C 0 C 0 e mm10.chr15 77187679 10369 + 104043685 I e canFam3.chr10 40970140 132 - 69331447 I e papAnu2.chr10 76382045 555 + 90941950 M a score=160142.000000 s hg38.chr22_KI270876v1_alt 201973 240 + 263666 CTTTGACAgctgggcatggtggctcacgcctgtaatcccagcactttgggaggctgaggtgggcggatcac--gaggtcaggagatggagaccatcctggctaacatggtga-aaccccgtctctac---------------taaaaatacaaaaatattagctgggcgtggtggcgggcgcctgtagt-ccagccactctggaggctgaggcaggagaatggcgtgaacctgggaggcggagcttgcagtgagccgac s panTro4.chr22 34582271 240 + 49737984 CTTTGACAgctgggcatggtggctcacgcctgtaatcccagcactttgggaggctgaggtgggcggatcac--gaggtcaggagatcgagactatcctggctaacatggtga-aaccccgtctctac---------------taaaaatacaaaactattagccgggcatggtggcgggcgcctgtagt-ccagccactctggaggctgaggcaggagaatgccgtgaacctgggaggcggagcttgcagtgagccgac i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31001545 241 + 46535552 CTTTGACagctgggcgtggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggcggatcac--gaggtcaggagatcaagaccatcctggctaacatggtga-aaccccgtgtctac---------------taaaaatacaaaaatattagccgggcgtggtggcaggcgcctgtagtcccagccactctggaggctgaggcaggagaatggtgtgaacccgggaggcggagcttgcagtgagccgac i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100554854 240 - 115148730 TTTTGACAAccgggcatggtggctcacgcctgtaatctcagcactttgggaggccgaggtgggtggatcac--gaggtcaggagatcgagaccatcctggctaacatggtga-aaccccgtctctac---------------taaaaatacaaaaatattagccgggtgtggtggcaggcgcctgtagtcccagccactctgaaggctgaggcaggagaatggcgtgaacctcggaggcggagcttgcagtgagctga- i nomLeu3.chr7b C 0 C 0 s calJac3.chr1 198356084 244 + 210400635 CTCTg---gctaggcatggtggcttacccctataatctcagtactttggaagcctgaggtggtaagatcactggaggtcaggtattcaagaccagcctgggcaacagaaccacagacctgtctctacaaataaacaaataaataaaaatacaaagatg--agccaggtgtggtggtgcacacctgtagtcccag---------aggctgaagagggaggatagcttgaatccaggagattgaggttccaaggagctat- i calJac3.chr1 C 0 C 0 e mm10.chr15 77187679 10369 + 104043685 I e canFam3.chr10 40970140 132 - 69331447 I e rheMac3.chr10 80699836 0 + 95678458 C e papAnu2.chr10 76382045 555 + 90941950 M e macFas5.chr10 81126400 0 - 96509753 C e chlSab2.chr19 18651444 0 + 33263144 C a score=10650.000000 s hg38.chr22_KI270876v1_alt 202213 21 + 263666 gatcgcgccactgcactccag s ponAbe2.chr22 31001786 21 + 46535552 gatcgcgccattgcactccag i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100555094 21 - 115148730 gatcgtgccactgcactccag i nomLeu3.chr7b C 0 C 0 s calJac3.chr1 198356328 21 + 210400635 gatcacaccactgcactccag i calJac3.chr1 C 0 I 1256 e mm10.chr15 77187679 10369 + 104043685 I e canFam3.chr10 40970140 132 - 69331447 I e rheMac3.chr10 80699836 0 + 95678458 C e panTro4.chr22 34582511 0 + 49737984 C e papAnu2.chr10 76382045 555 + 90941950 M e macFas5.chr10 81126400 0 - 96509753 C e chlSab2.chr19 18651444 0 + 33263144 C a score=12510.000000 s hg38.chr22_KI270876v1_alt 202234 53 + 263666 cttggcaacagagtgagactccgtctcGGGTGGCAGGGAGGAGGGGGAAGAAC s ponAbe2.chr22 31001807 53 + 46535552 cttggcgacagagcgagactccgtctcaGGTGGCGGGGAGGAGGGGCAAGAAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100555115 53 - 115148730 cttggcgacagagcgagactcagtctcTGGTGGCAGGGAGGAGGAGGAAGAAC i nomLeu3.chr7b C 0 C 0 e mm10.chr15 77187679 10369 + 104043685 I e canFam3.chr10 40970140 132 - 69331447 I e calJac3.chr1 198356349 1256 + 210400635 I e rheMac3.chr10 80699836 0 + 95678458 C e panTro4.chr22 34582511 0 + 49737984 C e papAnu2.chr10 76382045 555 + 90941950 M e macFas5.chr10 81126400 0 - 96509753 C e chlSab2.chr19 18651444 0 + 33263144 C a score=84535.000000 s hg38.chr22_KI270876v1_alt 202287 65 + 263666 CTTTggtcaggcatggtggctcacgcctataatctcagcactttgggaggctgaggtgggaagat s ponAbe2.chr22 31001860 65 + 46535552 CTTTggtcagtcatggtggctcatgcctataatctcagcactttgggaggctgaggtgggaagat i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100555168 64 - 115148730 CTTTggtcaggcatggtggctcacgcctataatctcagcactttgggaggctgaggt-ggaagat i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80699836 65 + 95678458 CTTTggtcaggcatggtggctcacacctgtaatctcagcactttgggaagctgaagtgggaagat i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81126400 65 - 96509753 CTTTggtcaggcatggtggctcacacctgtaatctcagcactttgggaagctgaagtgggaagat i macFas5.chr10 C 0 C 0 s chlSab2.chr19 18651444 65 + 33263144 CTTTggtcaggcatggtggctcacacctgtaatctcagcactttgggaagctgaggtgggaagat i chlSab2.chr19 C 0 C 0 e mm10.chr15 77187679 10369 + 104043685 I e canFam3.chr10 40970140 132 - 69331447 I e calJac3.chr1 198356349 1256 + 210400635 I e panTro4.chr22 34582511 0 + 49737984 C e papAnu2.chr10 76382045 555 + 90941950 M a score=859200.000000 s hg38.chr22_KI270876v1_alt 202352 512 + 263666 cacttgagatcatgcattcaagaccagcctgtggcaacacagccacagacttgtctctac---aaaaaaataaataaaaatacaaaaa-----------tggtggcacacatctgtagtcccacccagctactcgaggggctaaggaaggaggatagcttgaatccaggagattgagactgcactgagctgtgatcgcaccactgcactccagcctgggcaacagaatgagactctgtctccaaaaaaaaaaaaaggaaga---aaTTTTTTTTTaatgtctaatgcagttgttttttcactatccctttattcttat-------------ttcttaattataagaaaacttagggccgggcacagtggctcacacctataatcccagcactttgggaggccgaggcgggtggatcatgaggtcaggagttcgagacctgcctggccaatatggtgaaaccctgtctctaataaaaatataaaaattagccgggtgtagtggcatggacctgtagtcccagctacttgggaggctgaggcag s ponAbe2.chr22 31001925 508 + 46535552 cacttgagatcacgcattcaagaccagcctg-ggcaacacagccacagacttgtctctac---aaaaaaataaataaaaatacaaaaa-----------tggtggcacacacctgtagtcccacccagctactcgaggggctaaggaaggaggatagcctgaatccaggagactgagactgcattgagctgtgatcgcaccactgcactccagcctgggcaacagaatcagactctgtctccaaaaaaaaaa---gaaaga---aaTTTTTTTTTaatatctaatgcagttgttttttcactatccctttattcttgt-------------ttcttaattataagaaaacttagggccgggcacagtggctcacacctataatcccagcactttgggaggccgaggcgggtggatcatgaggtcaggagttcgagacctgcctggccaatatggtgaaaccctgtctctaataaaaatataaaaattagccgagtgtagtggcgtgcacctgtagtcccagctacttgggaggctgaggcag i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100555232 524 - 115148730 cacttgagatcacacattcaagaccagcctg-ggcaacacagccacagacttgtctctac---aaaaaaataaataaaaatacaacaatgagccaggtgtggtggcacacacctgtagtcccacctagctactcaaggggctaaggaaggaggatagcttgaatccaggagattgagactgcactgagctgtgatcgcaccactgcactccaacctgggcaacagaatgagactctgtctccaaaaaaaaaaaaaaaaagaaaTAATTTTTTTTTACTGTCTAAGGCAGTTGTTTTTTCACTATCCCTTTATTCTTAT-------------TTCTTAATTATAAGAAAACTTAGggcccggcacagtggctcacacctataatcccagcactttgggaggccgaggcgggtggatcatgaggtcaggagttcgagactagcctggcc-acatggtgaaatcccgtctctaataaaaatataaaaattagccgggtgtagtggcatgcacctgtagtcccagctacttgggaggctgaggcag i nomLeu3.chr7b C 0 I 323 s rheMac3.chr10 80699901 515 + 95678458 cacttaaggtcaggcattcaagaccagcctg-ggcaacacagccacagacttgtcgctacaaaaaaaaaaaaaaaaaaaatacaaaaacgagccaggtgtggtggcacacagctgtagtcccactcagctacttgagatgctaaggaaggaggatagcttaaatttaggagattgaggctgtagcgagctgtgatcgcaccactgcactccagcctgggcaacagagtaagactctgtctccaaaaaaataagaaagaaaa---aaaTTTTTTTTaatttccaatgca---gttttttcactatccctttattcttat-------------ttcttagttataagaaaacttaGgaccaggcacagtggctcacgcctataatccc------ttgggaggccaacgcgggcggatcatgaggtcaggagttcgagaccagcctggccaatacagtgaaaccccgtctctaataaaaatgtaaaaa-tagccaggtgtgggggcgtgcacctgtagtcccagctcctcaggaggctgagacag i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81126465 516 - 96509753 cacttgaggtcaggcattcaagaccagcctg-ggcaacacagccacagacttgtcgctac--aaaaaaaaaaaacaaaaatacaaaaacgagccaggtgtggtggcacacagctgtagtcccactcagctacttgagatgctaaggaaggaggatagcttaaattttggagattgagactgtagcgagctgtgatcgcaccactgcactccagcctgggcaacagagtaagactctgtctccaaaaaaataagaaagaaaa---aaatttttttaaatttccaatgcagttgttttttcactatccctttattcttat-------------ttcttagttataagaaaacttaGgaccaggcacagtggctcacgcctataatccc------ttgggaggccaaggcgggcggatcatgaggtcaggagttcgagaccagcctggccaatacagtgaaaccccgtctctaataaaaatgtaaaaa-tagccaggtgtgggggcgtgcacctgtagtcccagctcctcaggaggctgagacag i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76382600 515 + 90941950 cacttgaggtcaggcattcaagaccagcctg-ggcaacgcagccACCGACTtgtcgctac---aaaaaaataaacaaaaatacaaaaacgagccaggtgtggtggcacacacctgtagtcccactcagctacttgagatgctaaggaaggaggatagcttgaatttaggagattgaggctgtagcgagctgtgatcgcaccactgcactccagcctgggcaacagagtaagactctgtctccaaaaaaataagaaagaaaa---aaaaatttttaaatttccaatgcAGTTGTTTTTTCACTATccctttattcttat-------------ttcttagtTATAAGAAAACttaggaccaggcacagtggctcacgcctataatccc------ttgggaagccaaggcgggcggatcatgaggtcaggagttcgagaccagcctggccaatacagtgaaaccccgtctctaataaaaatgtaaaaa-tagccaggtgtgggggcgtgcacctgtagtcccagctcctcaggaggctgagacag i papAnu2.chr10 M 555 C 0 s chlSab2.chr19 18651509 528 + 33263144 cacttgaggtcaggcattcaagaccagcctg-ggcaacacagccacagacttgtcgctac---aaaaaaataaacaaaaatacaaaaacgagccaggtgtggtggcacccacctgtagtcccactcagctacttgagatgctaaggaaggaggatagcttgaatttaggagattgaggctgtagcgagctgtgatcgcaccactgcactccagcctgggcaacagagtaagactctgtctccaaagaaataagaaagaaaa---aaaaTTTTTTTAATTTCCAATGCAGTTGTTTTTTCACTATCCCTTTATTCTTATTCTTAGTTCTTTATTCTTAGTTATAAGAAAACTTAGgaccaggcacagtggctcacgcctataatccc------ttgggaggccaaggcgggcggatcataaggtcaggagttcgagaccagcctggccaatacagtgaaaccccgtctctaataaaaatgtaaaaa-tagccgggcgtgggggcgtgcacctgtagtcccagctactcagggggctgagacag i chlSab2.chr19 C 0 C 0 e mm10.chr15 77187679 10369 + 104043685 I e canFam3.chr10 40970140 132 - 69331447 I e calJac3.chr1 198356349 1256 + 210400635 I e panTro4.chr22 34582511 0 + 49737984 C a score=4365.000000 s hg38.chr22_KI270876v1_alt 202864 3 + 263666 gag s ponAbe2.chr22 31002433 3 + 46535552 gag i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80700416 3 + 95678458 gag i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81126981 3 - 96509753 gag i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76383115 3 + 90941950 gag i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18652037 3 + 33263144 gag i chlSab2.chr19 C 0 C 0 e mm10.chr15 77187679 10369 + 104043685 I e canFam3.chr10 40970140 132 - 69331447 I e calJac3.chr1 198356349 1256 + 210400635 I e panTro4.chr22 34582511 0 + 49737984 C e nomLeu3.chr7b 100555756 323 - 115148730 I a score=78972.000000 s hg38.chr22_KI270876v1_alt 202867 40 + 263666 aaatgcttgaacccgggaggcagaggttgcagtgagccaa s ponAbe2.chr22 31002436 40 + 46535552 aaatgcttgaacccgggaggcagaggttgcagtgagccaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100556079 40 - 115148730 aAATgcttgaacccgggaggcagaggttgcagtgagccaa i nomLeu3.chr7b I 323 C 0 s rheMac3.chr10 80700419 40 + 95678458 aaatgcttgaacctgggaggcagaggttgcagtgagccaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81126984 40 - 96509753 aaatgcttgaacctgggaggcagaggttgcagtgagccaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76383118 40 + 90941950 aaatgcttgaacctgggaggcagaggttgcagtgagccaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18652040 40 + 33263144 aaatgcttgaacctgggaggcagaggttgcagtgagccaa i chlSab2.chr19 C 0 C 0 e mm10.chr15 77187679 10369 + 104043685 I e canFam3.chr10 40970140 132 - 69331447 I e calJac3.chr1 198356349 1256 + 210400635 I e panTro4.chr22 34582511 0 + 49737984 C a score=155865.000000 s hg38.chr22_KI270876v1_alt 202907 106 + 263666 gatcacgccactgcactccagcctggacaacagagt--gagaccctgtctc------------------aaaagaaaaaaagaaaagaaagaaaagaaa----aaagaaaaaaaaaagaaatg---------------aaaagaa s panTro4.chr22 34582511 106 + 49737984 gatcacgccactgcactccagcctggacaacagagt--gagaccctgtctc------------------aaaagaaaaaaagaaaagaaagaaaagaaa----aaagaaaaaaaaaagaaatg---------------aaaagaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31002476 126 + 46535552 gatcacaccactgcactccagcctggacaacagagtgagagaccctgtctcaaaaaaaaaaaagaaaagaaaagaaaaaaagaaaagaaagaaaagaaa----aaagcaaaaaaaaagaaatg---------------aaaagaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100556119 108 - 115148730 gatcatgccactgcactccagcctggacaacagagt--gagaccctctctcaaaaaa------------aaaaaaggaaaagaaaagaaagaaaagaaa----aaagaaaaaaa----aaatg---------------aaaagaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80700459 102 + 95678458 gatcatgccactgcactccagcctggacaacagagt--gagatgccatctc------------------aaaaataataa-----------------------tgatgataataataataaAGTANNNNNNNNNNNNNAAAGGAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81127024 110 - 96509753 gatcatgccactgcactccagcctggacaacagagt--gagatgccatctc------------------aaaaaaaaaaaaaaaaaCgaacgaacgaacgaacgaaagaaagaaagaaaaaag---------------aaaggaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76383158 102 + 90941950 gatcatgccactgcactccagcctggacaacagagt--gagatgccatctc------------------aaaaaaaaaaaaaaaaaaaaacgaac--------gaacgaacgaaagaaaaaag---------------aaaggaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18652080 91 + 33263144 gatcatgccactgcactccagcctggacaacagagt--gagatgctatcta------------------acaaaaaaaaaaaaa-------------------aaagaaaaaaagaaaGaaag---------------aaaagaa i chlSab2.chr19 C 0 C 0 e mm10.chr15 77187679 10369 + 104043685 I e canFam3.chr10 40970140 132 - 69331447 I e calJac3.chr1 198356349 1256 + 210400635 I a score=76254.000000 s hg38.chr22_KI270876v1_alt 203013 32 + 263666 aagaaaa-CTTAATATATGTTAAAG------GAAAAAAA------------ s panTro4.chr22 34582617 32 + 49737984 aagaaaa-CTTAATATATGTTAAAG------GAAAAAAA------------ i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31002602 32 + 46535552 aagaaaa-CTTAATATATGTTAAAG------GAAACAAA------------ i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100556227 32 - 115148730 aagaaaa-cttaatatatgttaaag------gaaaaaaa------------ i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80700561 51 + 95678458 AAGAAAACCTTAATATATGTTAAAGAAAAAAAAAAAAAAAAGGAAAGGGTC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81127134 49 - 96509753 aagaaaa-cttaatatatgttaaag-aaaaaaaaaaaaaaaggaaagGGTC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76383260 44 + 90941950 aagaaaa-cttaatatatgttaaag------aaaaaaaaaaggaaagggtc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18652171 48 + 33263144 aagaaaa-cttaatatatgttaaga--aaaaaaaaaaagaaagaaagGGTC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198357605 46 + 210400635 AAGAAAA-CTTGATATATGTTAATG----AAAGAaaaaaaaggaaagggtc i calJac3.chr1 I 1256 C 0 e mm10.chr15 77187679 10369 + 104043685 I e canFam3.chr10 40970140 132 - 69331447 I a score=5566907.000000 s hg38.chr22_KI270876v1_alt 203045 1681 + 263666 CATTTTACCCGGCTGGTAAA------------ACTT------TCCTGGTtagctgagaactaaagccatgagagtggatgaa-------------agagaatcaaaaaaagaggtgaaaggacttggctcaaaatattacaactttaaaactgagtacaaacttccaaagaggtgggaagaaaatcaggaaagtatgatgtcctgcaagtcaagtatccaagaaagtgaattagaga-acgaagtgatcagtgatag-aatattctacagataggtcaagtaa---gatgagggctgagaccagaccactagatttagcagcatgcaagttact-ggcaacttggactagagccctttcagtggtgtggttgcaataaaaacctggctgcgtgggtttaa-------------gaggagaactgatataatcagatataatcaaatataaacaacgctactgagttttgctttaaaggaaaagaaattcagcagttgctggc---aaagtgaggtcaagagtattatttttaaataagtggaagaacagcttaactgtatgctgacggg--actaatccaataaagacagaaaacttgatgatcccagagagagggaagagaattgctggatccatgtcctaaacagactagcagagataggacctagtatacaactggaaggttcaccttatataggaatgcaaatgcttcatg---agtgagggg--------acagtttattcatactgatgagagaaagtgggtaaatacgggggtgggaaatcctctcctgattgcttcagttttGCACATATCATCTGGTAC--TTATGACTTGTAAGCAAAAGCCAAAAGAAGCAATTTAACAACA-GCATGGCATTCT-GGGAGCCT-----AGATGGC-------AGAGTATTAG-GGCTGCTTTCTCACTTGC--CCTCTGGGTTTCTGTT-CTCTAAAATC-CTTGCAATCACTAAATGGCATAACTTTTTCTACAAAAGaaaggcaggaaattggggggcacaaaagagtcactgatccatactgactctgaaatctagcagggcaaacactgaaagttccttgattaggtctcaacactgggaaaagaattctccatgacttttgccttcatctctaggctcctgcttccaacctctgagtcatctttcccttttgatgaaaggtggcatgtgttagctcctgagcacttt-ctcagcctgcttcctgccagcagaat----gctagggg-----tgtccgacagcctcttttcattttgtactgtttcttttcctgttcagtcctagctacagtggatttcctgcatatct----------caccacaatagacaaaagctatacccatagatctctccaagaggaactct--tcta-cctctaccttgggctcctgctaaaaaggctagaagccctattgtttgacggagaggccttgagtgtgactgaagaggatgctaaggcactacc--------ttctcaggtcttaacagcaggctttaaaggcacagtcttggctttatctttagaccgccattctc-cccggagtggctcttgaattgatctttg--------ccgtgtctc-aatttcatcaccctctgccaaccagaaaggctgagaattttcaaa---atcatcaagttctggctccttttt-----taacagtgcttccctcaatttatttatttcccctcatacttt-----aagcag-----------caagaaggaaccagaggggatctgcaatgttttgtttagaag----ttta------cttagctagatctctcagttc s panTro4.chr22 34582649 1671 + 49737984 CATTTTACCCAGCTGGTAAA------------ACTT------TCCTGGTtagctgagaactaaagccatgagagtggatgaa-------------agagaatcaaaaaaagaggtgaaaggacttggctcaaaatattacaactttaaaactgagtacaaacttccaatgaggtgggaagaaaatcaggaaagtatgatgtcctgcaagtcaagtatccaagaaagtgaattagaga-acgaagtgatcagtgatag-aatattctacagataggtcaagtaa---gatgagggctgagaccagaccactagatttagcagcatggaagttact-ggcaacttggactagagccctttcagtggtgtggttgcaataaaaacctggctgcgtgggtttaa-------------gaggagaactgatataatca----------aatataaacaacgctactgagttttgctttaaaggaaaagaaattcagcagttgctggc---aaagtgaggtcaagagtattatttttaaataagtggaagaacagcttaactgtatgctgacggg--actaatccaataaagacagaaaacttgatgatcccagagagagggaagagaattgctggatccatgtcctaaacagactagcagagataggacctagtatacaactggaaggttcaccttatataggaaggcaaatgcttcatg---agtgagggg--------acagtttattcatactgatgagagaaagtgggtaaatacgggggtgggaaatcctctcctgattgcttcagttttGCACATATCATCTGGTAC--TTATGACTTGTAAGCAAAAGCCAAAAGAAGTAATTTAACAACA-GCATGGCATTCT-GGGAGCCT-----AGATGGC-------AGGGTATTAG-GGCTGCTTTCTCACTTGC--CCTCTGGGTTTCTGTT-CTCTAAAATC-CTTGCAATCACTAAATGGCATAACTTTTTCTACAAAAGAACGGCAgggaattggggggcacaaaagagtcactaatccatactgactctgaaatctagcagggcaaacgctgaaagttccttgattaggtctcaacactgggaaaagaattctccatgacttttgccttcatctctaggctcctgcttccaacctccgagtcatctttcccttttgatgaaaggtggcatgtgttagctcctgagcacttt-ctcagcctgcttcctgccagcagaat----gctagggg-----tgtccgacagcctcttttcattttgtactgtttcttttcctgttcagtcctagctacagtggatttcctgcaaatct----------caccacaatagacaaaagctatacccatagatctctccaagaggaactct--tcta-cctctaccttgggctcctgctaaaaaggctagaagccctattgtttgactgagaggccttgagtgtgactgaagaggatgctaaggcactacc--------ttctcaggtcttaacagcaggctttaaaggcacagtcttggctttatctttagaccgccattctc-cccggagtggctcttgaattgatctttg--------ccatgtctt-aatttcatcaccctctgccaaccagaaaggctgagaattttcaaa---atcatcaagttctggctccttttt-----taacagtgcttccctcaatttatttatttcccctcatacttt-----aagcag-----------caagaaggaaccagaggggatctgcaatgttttgtttagaag----ttta------cttagctagatctctcagttc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31002634 1669 + 46535552 AGTTTTACCCAGCTGGTAAA------------ACTT------TCCTGGTTAGCTGAGAACTAAAGCCATGAGAGTGGATGAA-------------AGAGAATCAAAAAAAGAGCTGAAAGGACTTGGCTTAAAATATTACAACTTTAaaactgagtacaaacttccaatgagctgggaagaaaatcaggaaagtttgatgtcctgcaagtcaagtatccaagaaagtgaattagaga-acgaagtgatcagtgatag-aatattctacagataggtcaagtaa---gatgagggctgagaccagaccaccagatttagcagcatggaagttact-ggcaacttggacaagagccctttcagtggtgtggttgcaataaaaacctggctgcgtgggtttaa-------------gaggagaactgatacaatca----------aatataaacaactctactgagttttgctttaaaggaaaagaaattcagcagttgctggc---aaagtgaggtcaagagtattatttgtaaataagtggaagaacagcttaactgtatgctgacggg--actaatccaataaagacagaaaacttgatgatcccagagagaggggagagaactgctgggtccatgtcctaaacagactagcagagatacgacctagtatacaactggaaggttcactttatataggaaggcaaatgcttcatg---agtgagggg--------atagtttattgatactaatgagagaaactgggtaaatatgggcatgggaaatcctctcctgattgcttcagttttGCACATATCATCTGGTAC--TGATGACCTGTAAGCAAAAGCCAAAAGAAGCAATTTAACAACA-GCATGTCATTCT-GGGAGCCT-----AGATGGC-------AGGGTATTAG-GGCTCCTTTCTCAATTGC--CCTCTGGGTTTCTGTT-CTCTAAAATC-CTTGCAATCACTAAACGGCATAACTTTTTCTACAAAAGaaaggcagggaattggggggcacaaaagagtcactgatccatactgactctgaaatctagcagggcaaatgctgaaagttccttgattaggtctcaacactaggaaaagaatcctccatgacttttgccttcatctctaggctcctgcttccaacctctgagtcatctttcccttttgatgaaaggtggcatgtgttagctcttgagcacttt-ctcagcctgcttcctgccagcagaat----gctagggg-----tgtccgacagcctcttttcattttgtactgtttcttttcctgttcagtcctagctacagtggatttcctgcaaatct----------caccacaatagacaaaagctatacccatagatctctccaagaggaactcttctcta-cttccaccttgggctcctgctaaaaaggctagaagccctattgtttgactgagaggcctttagtgtgactgaagagtatgctaaggcactacc--------ttctcaggtcttaacaacaggctttaaaggcacggcctcggctt----tttagaccaccattctc-cctggagtggctcttgaattgatctttg--------ccatgtctt-aatttcatcatcctttgccaaccagaaaggctgagaattttcaaa---atcatcaagttctggctccttttt-----taacagtgcttccctcaatttatttatttcccctcatacttt-----tggcag-----------caagaaggaaccagaggggatctgcaatgttttgtttagaag----ttta------cttagctagatctctcagttc i ponAbe2.chr22 C 0 I 67 s nomLeu3.chr7b 100556259 1687 - 115148730 agTTTTACCCAGCTGGTAAA------------ACTT------TCCTGTTtagctgagaactaaagccatgagagtggatgaa-------------agagaattaaaaaaagaggtgaaaggacttggctcaaaatattacaactttaaaactgagtacaaacttccaatgaggtgggaagaaaatcaggaaagtatgatgtcctgcaagtcaagtatccaagaaagtgaattagaga-atgaagtgatcagtgatag-aatattctacagataggtcaagtaa---gatgagggctgagaccagaccactagatttagcagcatggaagttact-ggcaacttggacaagagccctttcagtggtgtggttgcaataaaaatctggctgggtgggtttaa-------------gaggataactgatataatca----------aatataaacaactctacagagttttgctttaaaggaaaagaaattcagcagttgctggc---aaagtgaggtcaagagtattatttttaaataagtggaagaacagcttaactgtatgttgacggg--actaatccaataaagatagaaaacttgatgatcccagagagaggggagagaattgctggatccatgtcctaaacagactagcacagataggacctagtatacaaccggaaggttcaccttctataggaaggcaaatgcttcatg---agtgagggg--------acagtttattgatactgatgagagaaagtgggtaaatacgggggtggggaatcctctcctgattgcttcagttttGCACATATTATCTGGTAC--TTATGACCTGTAAGCAAAAGCCAAAAGAAGCAATTTAACAACA-GCATGGCATTCT-GGGAGCCT-----AGATGGC-------ATGGTATTAG-GGCTCCTTTCTCACTTGC--CCGCTGGGTTTCTGTT-CTCTAAAATC-CTTGCAATCACTAAATGGCGTAAGTTTTTCCACAAAAGaaaggcagggaattggggggcacaaaggagtcactgatccatactgactctgaaatctagcagggcaaatgctcaaagttccttgattaggtctcaacactgggaaaagaattctccatgacttttgccttcacctctaggctcctgcttccaacctctgagtcatctttcccttttgatgaaaggtggcatgtgttagctgctgagcacttt-ctcagcctgcttcctgccagcagaat----gctagggg-----tgtccgacagcctcttttcattttgtactatttcttttcctgttcagtcctagctacggtggatttcctgcaaatct----------caccacaatagacaaaagctgtacccatagatctctccaagaggaactcttctcta-cctctaccttgggctcctgctaaaaaggctagaagccctattgtttgactgagaggcctttagtgtgactgaagagtacactaaggtactacc--------ttctcaggtcctaacaacaggctttaaaggcacagcctcggctttatctttagaccaccattctc-cccggagtggctcttgaattgatctttg--------ccatgtctt-aatttcatcaccctttgccaaccagaaaggctgagaattttcaaaatcatcatcaagttctggctccttttt-----taacagtgcttccctcaatttatttatttcccctcatacttt-----aagcagcaagaaggaaacaagaaggaaacagaggggatctgcaatgttttgtttagaag----ttta------tttagctagatctctcagttc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80700612 1675 + 95678458 CATTGGCCCCAGCTGGTACA------------ACTT------TCCTGGTTAGTTGAGAACTGAAGCCATAAGAGTGGATGAA-------------AGAGAATC--AAGAAGAGGTCAAAAGACTTGGCTCAAAATATTACAACTTTAaaactgagtacaaacttttaatgaggtgggaagaaaatcaggaaagtatgatgtcctggaagtcaagtacccaagaaagtgaattagaga-acgaagtgatcagtgatag-aatattctacagataggttaagtaa---gatgagggctgagaccagaccactagatttagcagcatggaagttactgggcaacttggacaagagccctttcagtggtgtggctgcaataaaaacctggttgcctgggtttga-------------gaggagaactgatataatca----------aatataaacaactctactgagttttgctttaaaggaaaagaaattcagcagttgctgac---aaagtgaggtcaagagtattatttttaagtaagcgaaagaacagcttaactgtatgctgacagg--actaagccaataaagatagaaaacttgatgatcccagagagaggggagagaattgctggatccatgtcctaaacacactagcagagataggacctagtgtacaactggagggttcaccttatataggaaggcaaatgcttcatg---ggtgaaggg--------acagtttactgatactgatgagagaaagtgggtaaatatggaggtgggaaatcctctcctgattgcttcagttttGCACATATCATCTGGTAC--TTATGACCTGTAAACAAAAGCCAAAAGAAGCAATTTAACAACA-GCATGGCATTCT-GGGAGCCT-----AGATGGCTCCCAGAATGGTATTAG-GGCTCCTTTCTCACTTGC--TCTATGGGTTTCTGTT-CTCTAAAATC-CTTGCAATCACTAAATGGCATAACTTTTTCTACAAAAGaaaggcagggaactagggggcacaaaggagtcaatgatccatattgactctgaaatctaccagggcaaatgctgaaagttccttgattaagtctcaacactgggaaaagaattctccatgactgctgccttcatctctaggctcctgcttccaacctctgagtcatctttcccttttgatgaaaggtggcatgtgttagctgctgagcacttt-ctcagcctgcttcctgccagtagaat----gctagggg-----tgtccaacagcctc--ttcattttgtactggttcttttcctgttcagtccttgctacagtggatttcctgcaaatct----------caccacaatagacaaaagttatacccatagatctctccaagaggaattcttctcta-cctct-ccttgggctcctgctagaaaggctagaagtcctattgtttgactgaca-gcctttagtgtgactgaagagtaccctaaggcattacc--------ttctcaggtcttaacaaaaggctttacaggcacagcctccgctttacctttagaccaccattctc-cctggaatgggtcttgaattgatctttg--------gcatgtctt-aatttcatcaccctttgccaaccagaaaggctgagaattttcaaa---atcatcaagttttggctccttttt-----taacagtgcttccctcaatgtatttatttcccctcatacttt-----aagcag-----------caagaaggaaccagggggcatctgcaatgttttgcttagaag----ttta------cttagctagctctctcagttc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81127183 1675 - 96509753 CATTGGCCCCAGCTGGTACA------------ACTT------TCCTGGTTAGTTGAGAACTGAAGCCATGAGAGTGGATGAA-------------AGAGAATC--AAGAAGAGGTCAAAAGACTTGGCTCAAAATATTACAACTTTAaaactgagtacaaacttttaatgaggtgggaagaaaatcaggaaagtatgatgtcctggaagtcaagtacccaagaaagtgaattagaga-acgaagtgatcagtgatag-aatattctacagataggttaagtaa---gatgagggctgagaccagaccactagatttagcagcatggaagttactgggcaacttggacaagagccctttcagtggtgtggctgcaataaaaacctggttgcctgggtttga-------------gaggagaactgatataatca----------aatataaacaactctactgagttttgctttaaaggaaaagaaattcagcagttgctgac---aaagtgaggtcaagagtattatttttaagtaagcgaaagaacagcttaactgtatgctgacagg--actaagccaataaagatagaaaacttgatgatcccagagagaggggagagaattgctggatccatgtcctaaacacactagcagagataggacctagtgtacaactggagggttcaccttatataggaaggcaaatgcttcatg---ggtgaaggg--------acagtttactgatactgatgagagaaagtgggtaaatatggaggtgggaaatcctctcctgattgcttcagttttGCACATATCATCTGGTAC--TTATGACCTGTAAACAAAAGCCAAAAGAAGCAATTTAACAACA-GCATGGCATTCT-GGGAGCCT-----AGATGGCTCCCAGAATGGTATTAG-GGCTCCTTTCTCACTTGC--TCTATGGGTTTCTGTT-CTCTAAAATC-CTTGCAATCACTAAATGGCATAACTTTTTCTACAAAagaaaggcagggaactagggggcacaaaggagtcaatgatccatattgactctgaaatctagcagggcaaatgctgaaagttccttgattaagtctcaacactgggaaaagaattctccatgacttctgccttcatctctaggctcctgcttccaacctctgagtcatctttcccttttgacgaaaggtggcatgtgttagctgctgagcacttt-ctcagcctgcttcctgccagtagaat----gctagggg-----tgtccaacagcctc--ttcattttgtactggttcttttcctgttcagtccttgctacagtggatttcctgcaaatct----------caccacaatagacaaaagttatacccatagatctctccaagaggaactcttctcta-cctct-ccttgggctcctgctagaaaggctagaagtcctattgtttgactgaca-gcctttagtgtgactgaagagtaccctaaggcattacc--------ttctcaggtcttaacaacaggctttacaggcacagcctccgctttacctttagaccaccattctc-cctggaatgggtcttgaattgatctttg--------gcatgtctt-aatttcatcaccctttgccaaccagaaaggctgagaattttcaaa---atcatcaagttttggctccttttt-----taacagtgcttccctcaatttatttatttcccctcatacttt-----aagcag-----------caagaaggaaccagggggcatctgcaatgttttgcttagaag----ttta------cttagctagctctctcagttc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76383304 1669 + 90941950 CATTGGCCCCAGCTGGTACA------------ACTT------TCCTGGTTAGTTGAGAACTGAAGCCATGAGAGTGGATGAA-------------AGAGAATC--AAGAAGAGGTCAAAAGACTTGGCTCAAAATATTACAACTTTAAAACTGAGTACAAACTTTTAATGAGGTAGGAAGAAAATCAGGAAAGTATGATGTCCTGGAAGTCAAGTACCCAAGAAAGTGAATTAGAGA-ACGAAGTGATCAGTGATAG-AATATTCTACAGATAGGTTAAGTAA---GATGAGGGCTGAGACCAGACCACTAGATTTAGCAACATGGAAGTTACTGGGCAACTTGGACAAGAGCCCTTTCAGTGGTGTGGCTGCAATAAAAACCTGGTTGCCTGGGTTTGA-------------GAGGAGAACTGATATAATCA----------AATATAAACAACTCTACTGAGTTTtgctttaaaggaaaagaaattcagcAGTTGCTGAC---AAAGTGAGGTCAAGAGCATTATTTTTAAGTAAGCGAAAGAACAGCTTAACTGTATGCTGACAGG--ACTAAGCCAATAAAGATAGAAAACTTGATGATCctagagagaggggagagaattGCTGGATCCATGTCCTAAACACACTAGCAGAGATAGGACCTAGTGTACAACTGGAGGGTTCACCTTATATAGGAAGGCAAATGCTTCATG---GGTGAAGGG--------ACAGTTTACTGATACTGATGAGAGAAAGTGGGTAAATATGGAGGTGGGAAATCCTCTCCTGATTGCTTCAGTTTTGCACATATCATCTGGTAC--TTATGACCTGtaaacaaaagccaaaagaaacAATTTAACAACA-GCATGGCATTCT-GGGAGCCT-----AGATGGCTCCCAGAATGGTATTAG-GGCTCCTTTCTCACTTGC--CCTCTGGGTTTCTGTT-CTCTAAAATC-CTTGCAATCACTAAATGGCATAACTTTTTCTACAAAAGAAAGGCAGGGAACTAGGGGGCACAAAGGAGTCACTGATCCATATTGACTCTGAAATCTAGCAGGGCAAATGCTGAAAGTTCCTTGATTAAGTCTCAACACTGGGAAAAGAATTCTCCATGACT------TTCATCTCTAGGCTCCTGCTTCCAACCTCTGAGTCATCTTTCCCTTTTGATGAAAGGTGGCATGTGTTAGCTGCTGAGCACTTT-CTCAGCCTGCTTCCTGCCAGCAGAAT----GCTAGGGG-----TGTCCAACAGcctcttttcattttgtactggTTCTTGTCCTGTTCAGTCCTTGCTACAGTGGATTTCCTGCAAATCT----------CACCACAATAGACAAAAGTTATACCCATAGATCTCTCCAAGAGGAACTCTTCTCTA-CCTGTACCTTGGGCTCCTGCTAAAAAGGCTAGAAGTCCTATTGTTTGACTGAGA-GCCTTTAGTGTGACTGAAGAGTACCCTAAGGCATTACC--------TTCTCaggtcttaacaaaaggctttaCAGGCACAGCCTCGGCTTTACCTTTAGACCACCATTCTC-CCTGGAATGGGTCTTGAATTGATCTTTG--------GCATGTCTT-AATTTCATCACCCTTTGCCAACCAGAAAGGCTGAGAATTTTCAAA---ATCATCAAGTTTTGGCTCCTTTTT-----TAACAGTGCTTCcctcaatttatttatttcccccCATACTTT-----AAGCAG-----------CAAGAAGGAACCAGGGGGCATCTGCAATGTTTTGCTC---AG----TTTA------CTTAGCTAGCTCTCTCAGTTC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18652219 1678 + 33263144 CATTGGCCCCAGCTGGTACA------------ACTT------TCCTGGTTAGTTGAGAACTGAAGCCATGAGAGTGGATGAA-------------AGAGAATC--AAGAAGAGGTCAAAAGACTTGGCTCAAAATATTACAACTTTAaaactgagtacaaacttttaatgaggtgggaagaaaatcaggaaagtatgatgtcctggaagtcaagtacccaagaaagtgaattagaga-acgaagtgatcagtgatag-aatattctacagataggttaagtaa---gatgagggctgagaccagaccactagatttagcagcatggaagttactgggcaacttggacaagagccctttcagtggtgtggctgcaataaaaacctggtggcctgggtttga-------------gaggggaactgatataatca----------aatataaacaactctactgagttttgctttaaaggaaaagaaattcagcagttgctgac---aaagtgaggtcaagagtattatttttaagtaagcgaaagaacagcttaactgtatgctgacagg--actaagccaataaagatagaaaacttgatgatcccagagagaggggagagaattgctggatccatgtcctaaacacactagcagagataggacctagtgtacaactggagggttcacgttatataggaaggcaaatgcttcatg---ggtgaaggg--------acagtttactgatactgatgagagaaagtgggtaaatatggaggtgggaaatcctctcctgattgcgtcagttttGCACATATCATCTGGTAC--TTATGACCTGTAAACAAAAGCCAAAAGAAGCAATTTAACAACA-GCATGGCATTCT-GGGAGCCT-----AGATGGCTCCCAGAATGGTATTAG-GGCTCCTTTCTCACTTGC--CCTCTGGGTTTCTGTT-CTCTAAAATC-CTTGCAATCACTAAATGGCATAACTTTTTCTACAAAAGaaaggcagggaactagggggcacaaaggagtcactgatccatattgactctgaaatctagcagggcaaatgctgaaagttccttgattaagtctcaacactgggaaaagaattctccatgacttctgccttcatctctaggctcctgcttccaacctctgagtcatctttcccttttgatgaaaggtggcatgtgttagctgctgagcacttt-ctcagcctgcttcctgccagcagaat----gctagggg-----tgtccaacagcctcttttcattttgtactggttcttttcctgttcagtccttgctacagtggatttccggcaaatct----------caccacaatagacaaaagttatacccatagatctctccaagaggaactcttctcta-cctctaccttggggtcctgctaaaaaggctagaagtcctattgtttgactgaga-gcctttagtgtgactgaagagtaccctaaggcattacc--------ttctcaggtcttaacaaaaggctttataggcacagcctcagctttacctttagaccaccattctc-cctggaatgggtcttgaattgatctttg--------gcatgtctt-aatttcatcaccctttgccaaccagaaaggctgagaattttcaaa---atcatcaagttttggctccttttt-----taacagtgcttccctcaatttatttatttcccctcatacttt-----cagcaa-----------caagaaggaaccagggggcatctgcaatgttttgcttagaag----ttta------cttagctagctctctcagttc i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198357651 1648 + 210400635 cgttggccccagctggtaaatggttcttaactactt------tcctgatgagctgagAACTTAAGTCATAAGAGTGGCTGCA-------------AGACAATCAAGAAAAGAGGTCAAAGGATTTGGCTCAAAATATTACAACTTTAaaactcagtacaaacttccaatgaggtgggaagaaaatcaggaaagtatgatgtctgggaagtcaagtatccaagaaagtgaatcagaga-aggaagttatcaatgataacaatattctacagataggccaagtaa---gatgacggctgagaccagaccactagatttagcagcatggaacttact-ggcaacttggacaacagccctttcagcggtgtgattgcaataaaaacctggctgcataggtttga-------------gaggaaaactgatacaatca----------aatataaacaactctactgagttttgctttaaaggaaaagaaattcagcagttgctggc---aaagtgtggtcaagagtattatttttaaataagtgaaagaaaagcttaactgtatgctgacaag--attaatccaataaaggtagaaaccttgatgatcctagagagaggggagagaattgctggatccacgtcctaaacagattagcagagataggacctagaatacaactggagggttcaccttacataggaaggcaaatgcttcata---ggtgagggg--------acagtttattgatactggtaagagaaagtgggtacagatggggatgggaaatcctctcctgatcgcttcagttttGCACATATCATCTGGTAC--TTATGACCTATAAAC-AAAGTCAAAAGA--------------A-GCATGGCATTCT-GGGAGCCT-----AAGTGGC-------ATGGTAGTAG-GGCTCCTTTCTCACTTGC--CCTCTGGGTTTCTGTT-TTCTAAAATT-CTTGCAATCACTAAATCGCATAGCTTTTTCTACATAAGGGAGGCAgggaattaggtggcacaaaggagtcactgatccatagtgactctgaaatccagcagggcaacagttgaaagttccttgattaggtctcaacactgggaaaataattctccatgacttatgcctccatctctaggctcctgcttccaacctctgagtcatctttcccttttcgtgaaaggtggcatgtgttagc---ggggcacttt-ctcagcttgcttcctgccagcagaat----gctagggg-----tgtttgaccgccttttttcattttgaactgtttcttttcctgttcagtcttagctacc-tagatttcctgcaaatct-------------cacaataaacaaaagctatccccatagatctctccaagacaaactcttctctatcttctacctagggctcctgataaaaaggctAGACGCCCTATTGTCTGACAGAA--gcctttagtgtgactgaagagtaccctaaggcactaca--------ttctcaggtcttaacaaaatgctttaaa-gcacaccctcggctttatctttagaccaccattctt-cttgcagtggcccttgaactgatctttg--------tcatgtctt-aattttatcaccctttgccacccagaaaggctgagaattttcaaa---a--------------ctccttttt-----taacagtgcttccctcaatttctttctttccgctcatgcttt-----aagcag-----------caagaaggaaccagagggcatctacaatgttttgcttagaat----ttta------cttagctagatctcacagttc i calJac3.chr1 C 0 C 0 s canFam3.chr10 40970272 1720 - 69331447 CACTGAACCCAGATGATACATG----------ACTTTGGCCATTCTGGGCAACTGAATGCtaaatccatgagactagatgaaatcactaaatgagagagaatc-aagaaataagtgcaaagacctagctcagagtatgacaactttaaaactgag-acatagtcacca------aagaagaaagccagggaagtgtgatgtcctggaagtcaagtacccaagacagtatgtcagagagagggaaaaatcagtgacgt-tatgttctatagacaggtcaggtgatgcaaagacaactgagccctggtcactggacttagcagcatggaagttatc-agtaatcttgacaaaagccagttcagtggcatggtggcaataaaaatttga----gtgggtttaatggggagtgagtggagaagaactgatatgagca----------aatgcagacaattctattgagttttgctctaaaggaaaagaaatttagcagtagctggcagtaaagtgaggtcaagaggattatttctgaatggttgaaggaatagcttaattgtgtgttaacgggacaccaatctagtaaagagagaaaacttgacaatctcagagagcacggagagaattgctgagtccagatgctaactggaaaagcagagaggggacccaggatacaa-tgggtggctggcctactgcaggaacgcagctgtttcatgtacagtgacaggagaaaccaaaagtttgctaccactgacaggagaggatggg-aagtgtgctagtaagaaat------ctggttgctttagtttt---ctta-CTTTAGAAACTGTTAACACTTACAAACAAGAGCCAAAGTGGCCGACTCAGCGGTAGGTGCGGCATTCCAGGGAGCCTGGCTGAAATGGC-------ACAGTACCCTCGGCACCTTTCTCACTAGCTTCTTTTGGGTTTCCATTACTGTGGCATCTCTTATAATCTCCAAATTGCataaccacttcttcaaaagggag--aggggagtgggagacacaaaggagtcactggtccatagggatagtgaaatctagctgggcaaatgctg-gagttctttgattaggtctcaaggttgaggtaacaattctccacagcttg-------------------------------tctgcgtcatccttcttttttcatgaaaggtagcatgtgttggcgacttagcagtctgctcagcctgcttcctgccggaagaattgggggtggggggaggctgttcagcagcctcttttcattttgaatggtttcttttcctttcccatcttagctgcagtaggtctcctgtgaatctcaatgagattcactgcattagacaaaagctagacccactaatatcttcaagataagcccttctcta-cctgt-------gctgctgctaaaatggctagaagccctattgtgtaactgagaggtcttttgtgtgact---------cttacggcactacctttgattattctggggtcttaaca----gtcttacagttacatccac-acttcatctttagactcccattctctcctggcagtgcccttgaactgacctttgctaggaacccacatcttaaatttgactgtcatttgccaggtagagtacccaaggattttcaaa---accatcaagtccaagctcctttttttgtataacaatcctttccccaataccttttccccctatcacacttcactagaaggag-----------caagacgaaaccatggagcatcttcagtgtgccaccatggagcatcttcagtgtacctcagcttgatctcccagttc i canFam3.chr10 I 132 C 0 e mm10.chr15 77187679 10369 + 104043685 I a score=38494.000000 s hg38.chr22_KI270876v1_alt 204726 15 + 263666 atgaaacacactttc s panTro4.chr22 34584320 15 + 49737984 atgaaacacactttc i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100557946 15 - 115148730 atgaaacacactttc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80702287 15 + 95678458 atgaaacacactttc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81128858 15 - 96509753 atgaaacacactttc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76384973 15 + 90941950 ATAAAACACACTTTC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18653897 15 + 33263144 atgaaacacactttc i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198359299 15 + 210400635 attaagcacactttc i calJac3.chr1 C 0 C 0 s canFam3.chr10 40971992 15 - 69331447 acaaggcccatcgtc i canFam3.chr10 C 0 C 0 e mm10.chr15 77187679 10369 + 104043685 I e ponAbe2.chr22 31004303 67 + 46535552 I a score=617419.000000 s hg38.chr22_KI270876v1_alt 204741 200 + 263666 tgctttcca-caactataaatgatagtgttgctaaactttctaccactacataacaaggatcccctttcttccagtttctttcctttaagacctcgtgacaatcgcc-tcaaagtcccat-tttt----ataatgtgttcaaggtattctaatcttatactaacactctccttaaaagtccactgcccagtttcaaagtcactcc--ca s panTro4.chr22 34584335 200 + 49737984 tgctttcca-caactacaaatgatagtgttgctaaactttctaccactacataacaaggatcccctttcttccagtttctttcctttaagacctcgtgacaatcgcc-tcaaagtcccat-tttt----ataatgtgttcaaggtattctaatcttatattaacactctccttaaaagtccactgcccggtttcaaagtcactcc--ca i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31004370 196 + 46535552 tgctttcca-caactacaaatgatagtgttgctaaactttctaccactacataacaaggatccc--ttcttccagtttctttcctttaagacctcgtgacaatcgcc-tcaaagtcccat-tttt----acaatgtgttcaaggtattctaatcttatactaacactctccttaaaagtccactgcc--gtttcaaagtcactcc--ca i ponAbe2.chr22 I 67 C 0 s nomLeu3.chr7b 100557961 201 - 115148730 tgctttcca-caactacaaatgatagtgttgctaaacgttctaccactacataacaaggatcccctttcttccagtttctttcctttaagacctcgtgacaatcgcc-tcaaagtcccatatttt----acaatgtgttcaaggtattctaatcttatactaacactctcctcaaaagtccactgccctgtttcaaagtcactcc--ca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80702302 203 + 95678458 tgcttacca-taactacaaacgataatgtggctaaactttcagccactacataacaaggatcccctttcttccagtttcttttctttaagacctcgtgacaatcgcc-tcaaagtcctgtatttt----acattgtgttcaaggtactctaatcttatactaacacgctcctcaaaagtccactgccctgttccaaagtcactcccaca i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81128873 203 - 96509753 tgcttacca-taactacaaacgataatgtggctaaactttcagccactacataacaaggatcccctttcttccagtttctttcctttaagacctcgtgacaatcgcc-tcaaagtcctgtatttt----acattgtgttcaaggtactctaaccttatactaacacgctcctcaaaagtccactgccctgttccaaagtcactcccaca i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76384988 203 + 90941950 TGCTTACCA-TAACTACAAACGATAATGTGGCTAAACTTTCAGCCACTACATAACAAGGATCccctttcttccagtttctttcctttaagaCCTCGTGACAATCGCC-TCAAAGTCCTGTATTTT----ACAGTGTGTTCAAGGTACTCTAATCTTATACTAACACTCTCCTCAAAAGTCCACTGCCCTGTTCCAAAGTCACTCCCACA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18653912 204 + 33263144 tgcttatca-taactacaaatgataatgtggctaaactttcagccactacataacaaggatcccctttcttccagtttctttcctttaagaccttgtgacaatcaccttcaaagtcctgtatttt----acagtgtgttcaaggtactctaatcttacactaacactctcctcaaaagtccactgccctgttccaaagtcactcccaca i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198359314 204 + 210400635 tggttcccattaggtacaaatgatggtgttgctgaactttctgccactacataacaaggattccctttcttccagtttctctcctttaagccttcatgacaatcacc-tcaaaatcccatatttt----acaatgtattcaaggtactctaatcttacactaacactttcctcaaaagtccactgccctgtttcaaagtcactcccaca i calJac3.chr1 C 0 C 0 s canFam3.chr10 40972007 171 - 69331447 --------------tgcaaacaatggtgttgctcagccgtctgccagtacagactgagggt--------------ttccttcccttgaagccctc---acagctgtc-tcaaagtcccaaatgtcacaaacaacatgctcaaggtacccttgattttcacg---actcttctc-aaagcccactgcccagttcttaagtcactcc--ca i canFam3.chr10 C 0 I 15 e mm10.chr15 77187679 10369 + 104043685 I a score=449696.000000 s hg38.chr22_KI270876v1_alt 204941 189 + 263666 gtttagattttcaccaaaaagcacc-ccactattggtaccaaaatcTGTAGTTATCTCttt------ttttttttttttttttttttt---------tgtgatacagggtctcgct-ctcttgctcaagtt------------cttgctctcagctcattgcagcttacac--ctcccaggctcaggtgatcctcccacctcagcctcccaagtagctgg s panTro4.chr22 34584535 204 + 49737984 gtttagattttcaccaaaaagcacc-ccactattggtaccaaaatcTGTAGTTATCTCTCTCTCTTCtttttttttttttttttttttgtgtgtgtgtgtgatacagggtctcgct-ctcttgctcaagtt------------ctcgctctcagctcattgcagcttacac--ctcccaggctcaggtgatcctcccacctcagcctcccaagtagctgg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31004566 182 + 46535552 gtttagattttcaccaaaaagcacc-ccactattggtaccaaaatcTGTAGtt--------------ttttttttttttttttttttt---------tttgatacagggtctcgct-ctcttgctcaagtt------------ctcactctcagctcattgcagcttacac-tttcccaggctcaggtgatcctcccatctcagcctcccaagaagctgg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100558162 178 - 115148730 gtttagattttcaccaaaaagcacc-ccactattggtaccaaaatcTGTAGTTATCTCttt------ttttttttttttttttttttt---------tg-----------ctcgct-ctcttgctcaagtt------------ctcgctctcagctcattgcagcttacac--ctcccaggttcaggtgatcctcccacctcagtctcccaagtagctgg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80702505 173 + 95678458 gtttagatgttcaccaaaaagcacc-ccactattggtaccaaaatcTGTAGttctctctct---------------------tttttt---------tg-gatgcagggtcttgct-ctcttgctcaggtt------------ctcgctctcagcttattgcagcttagac--ctcccaggctcaggtgattctcccacctcagcctcccaagtagctgc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81129076 173 - 96509753 gtttagatgttcaccaaaaagcacc-ccactattggtaccaaaatcTGTAGttctctctct---------------------tttttt---------tg-gatgcagggtcttgct-ctcttgctcaggtt------------ctcgctctcagcttattgcagcttagac--ctcccaggctcaggtgattctcccacctcagcctcccaagtagctgg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76385191 173 + 90941950 GTTTAGATGTTCACCAAAAAGCACC-CCACTattggtaccaaaatctgtagttctctctct---------------------tttttt---------tg-gatgcagggtcttgct-ctcttgctcaggTT------------CTCGCTCTCAGCTTATTGCAGCttagac--ctcccaggctcaggtgattctcccacctcagcctcccaagtagctgg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18654116 173 + 33263144 gtttagatgttcaccaaaaagcacc-ccactattggtaccaaaatcTGTAGttctctctct---------------------tttttt---------tg-gatgcagggtcttgct-ctcttgctcaggtt------------ctcgctctcagcttattgcagcttagac--ctcccaggctcaggtgattctcccacctcagcctcccaagtatctgg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198359518 182 + 210400635 ttttagatatgcactaaaaagcacctccactattggga-caaaATC------TCTCTCTCT---------------------CTCttt---------ct-gatacagggtctagctcctcttgctcagggtggagtgcagtggcatgatctcagctcattgaagcttagacttcccccagactcaggtgatccacccacctcagcctcccaagtagccag i calJac3.chr1 C 0 C 0 e mm10.chr15 77187679 10369 + 104043685 I e canFam3.chr10 40972178 15 - 69331447 I a score=134013.000000 s hg38.chr22_KI270876v1_alt 205130 47 + 263666 actacaggcacgcaccaccttgcccagctaatttttgtatttttagt s panTro4.chr22 34584739 47 + 49737984 actacaggcacgcaccaccttgcccagctaatttttgtatttttagt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31004748 47 + 46535552 actacaggcgtgcaccaccttgcccagctaatttttgtatttttagt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100558340 47 - 115148730 actacaggcacgcaccaccttgcccagctaatttttgtatttttagt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80702678 47 + 95678458 actacaggtgcgacccacctcgcctggttaatttttgtatttttagt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81129249 47 - 96509753 actacaggtgcgtaccacctcgcccggttaatttttgtatttttagt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76385364 47 + 90941950 actacaggtgcgcaccacctcgcccagttaatttttgtatttttagt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18654289 47 + 33263144 actacaggtgcgcaccacctcacccggttaatttttgtatttttagt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198359700 38 + 210400635 actatagg---------cctcacctggctaatttttgtatttttagt i calJac3.chr1 C 0 C 0 s canFam3.chr10 40972193 40 - 69331447 gctacggaagcacttcactt-------ttaatactagaatTTGtagt i canFam3.chr10 I 15 C 0 e mm10.chr15 77187679 10369 + 104043685 I a score=388134.000000 s hg38.chr22_KI270876v1_alt 205177 121 + 263666 agagatggggttttgctatgttgcccaggctggtctcaaactcctgggctcaagcgatccgcctgcctcggcctcacaatgtgctgggattacagatgtgagccaccacacccggcctagt s panTro4.chr22 34584786 121 + 49737984 agagatggggttttgctatgttgcccaggctggtctcaaactcctgggctcaagcgacccgcctgcctcggcctcacaatgtgctgggattacagacgtgagccaccacacccggcctagt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31004795 121 + 46535552 agagatggggttttgctatgttgcctaggctggtctcaaactcccgggctcaagcgatccgcctgcctcggccttacaatgtgctgggattacagacgtgagccaccacacccggcctagt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100558387 121 - 115148730 agagatggagttttgctatgctgcccaggctggtctcaaactcctgggctcaagcgatccgcctgcctcagcctcacaatgtgctgggattacagacgtgagccaccacacccggcctagt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80702725 121 + 95678458 agagatggggttttgctatgttgcccaggctggtctcaaactcctgggctcaagcgatccacctgcctcggcctcacaatgtgctgagataacagacgtgagccaccacacccggcctagt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81129296 121 - 96509753 agagatggggttttgctatgttgcccaggctggtctcaaactcctgggctcaagcgatccacctgcctcggcctcacaatgtgctgagattacagacgtgagccaccacacctggcctagt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76385411 121 + 90941950 agagatggggttttgctatgttgcccaggctggtctcaaactcctgggctcaagcgatccacctgcctcagcctcacaatgtgctgggattacagacgtgagccaccacacccggcctagt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18654336 121 + 33263144 agagatggggttttgctatgttgcccaggctggtctcaaactcctgggctcaagcgatccacctgccttggcctcacaatgtgctgggattacagacgtgagccaccacacccggcctagt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198359738 121 + 210400635 agagatgggcttttgctatgttgcccaggctgctctcaaactcctgggctcaagccatgcacctgcctcggcctcccaaagtgctgggattacagatgtcagccaccacacctggcctagt i calJac3.chr1 C 0 C 0 e mm10.chr15 77187679 10369 + 104043685 I e canFam3.chr10 40972233 0 - 69331447 C a score=2875447.000000 s hg38.chr22_KI270876v1_alt 205298 870 + 263666 tatctatttctatgtaacaattcattttcaatcacagtagcttaaaacagcatttattatct--cagtttatgtggatcagaaatccagctggg--taagctaagtgcttctggttcagggactctcacaaggctgcagtcaaggtgttggctggggctgcaatca--ttaaagcttgactatcaaggatccaccaccaaactcactcacctggctgctggcaggt---------cactagctgttaggcctagaca-----tcactggctcttgggccttccc-acaaggctactta----------------------acagtgtaggggctctgagagaaagg----tagagagggcaagcaccc--aagataaaagccacagtctctttgtaaccaaatcttagaagtgacatctcatcaa-ttttccatattctatgcattcaaagtgagtcactaggtccagcctata--aggggaagataatacacaagggtatgaatatcaggaggtggggatcactagggaccatcttagatgctgcctatcacaGACTAGCTGAATGTATtacaacatattggttaagagtactgactctgaagcaagactgcgca-----tttgaatcTTCCTTCCCCGTTGTAAGATGAA---------ACAAGATAATAGTAATGAAAGCATCAGACCCAGTGCCTCCTATCATAGGAGGCACTTGGGAATTTGTTTT--CTTATCTCTTCCAATCCCAACTGCCTTTAACAATC--GAAAATTTCTCCAGT-TTGAATATTATCTGCAAACATCCAATATTAGAG--CAACTTGTTGAGCAACATGCAAAA--ATGGTTTTGATTTTCAATGAATCCAAGAAACTTATTTTTAATAACCTTAATTTAAtaaaattaaacacaaaaataaaa--ataaatatctaaaattaCTT s panTro4.chr22 34584907 869 + 49737984 tatctatttctatgtaacaattcattttcaatcacagtagcttaaaacagcatttattatct--cagtttatgtggatcagaaatccagctggg--taagctaagtgcttctggttcagggactctcacaaggctgcagtcaaggtgttggctggggctgcaatca--ttaaagcttgactatcaaggatccaccaccaaactcactcacctggctgccggcaggt---------cactagctgttaggcctagaca-----tcactggcttgtgggccttccc-acaaggctactta----------------------acagtgtaggggctctgagagaaagg----tagagagggcaagcaccc--aagataaaagccacagtctctttgtaaccaaatcttgga-gtgacatctcatcaa-ttttccatattctatgcattcaaagtgagtcactaggtccagcctata--aggggaagataatacacaagggtacgaatatcaggaggtggggatcactagggaccatcttagatgctgcctatcacaGACTAGCTGAATGTATtacaacatattggttaagagtactgactctgaagcaagactgcgca-----tttgaatcTTCCTTCCCCGTTGTAAGATGAA---------ACAAGATAATAGTAATGAAAGCATCAGACCCAGTGCCTCCTATCATAGGAGGCACTCAGGAATTTATTTT--CTTATCTCTTCCAATCCCAACTGCCTTTAACAATC--GAAAATTTCTCCAGT-TTGAATATTATCTGCAAACATCCAATATTAGAG--CAACTTGTTGAGCAACATGCAAAA--ATGGTTTTGATTTTCAATGAATCCAAGAAACttatttttaataaccttaatttaatacaattaaacacaaaaataaaa--ataaatatctaaaattactt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31004916 870 + 46535552 tatctatttctatgtaacaattcattttcaatcacagtagcttaaaacagcatttattatct--cagtttatgtggatcagaaatccagctggg--taagctaagtgcttctggttcagggactctcacaaggctacagtcaaggtgttggctggggctgcaatca--ttaaagcttgacaatcgaggatccaccaccaaactcactcacctggctgctggcaggc---------cactagctattaggcctaga-a-----tcactggctcgtgggccttccc-acagggctactta----------------------acagtgtaagggctctgagagaaagg----tagagagggcaagcaccc--aagataaaagccacagtctctttgtaaccaaatcttggaagtgacatctcatcactttttccatattctatgcattcaaagtgagtcactaggtccagcctata--aggggaagagaatacacaagggtatgaatatcaggaggtgggaatcaccagggaccatcttagatgctgcctatcataGACTAGCTGAACGTATtacaacatattggttaagagtactgactctgaagcaagactgcgca-----tttgaatcTTCCTTACCCGTTGTAAGATGAA---------ACAAGACAATAGTAATGAAAGCATCAGACCCAGTGCCTCCTATCATAGGAGGCAATCGGGAATTTGTTTT--CTTATCTCTTCTAATCCCAACTGCCTTTAACAATC--GAAAATTTCTCCAGT-TTGAATATTATCTGCAAACATCCAATATTAGAG--CAACTTGTTGAGCAACATGCAAAA--ATGGTTTTGATTTTCAATGAATCCAAGAAACTAATTTTTAATAACCTTAATTTaataaaattaaacacaaaaataaaa--ataaatatctaaaaataCTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100558508 871 - 115148730 tatctatttctatataacaattcattttcaatcacagtagcttaaaacagcatttattatct--cagtttatgtggatcagaaatccagctggg--taagctcaatgcttctggttcagggactctcacaaggctgcagtcaaggtgttggctggggctgcaatta--ttaaagcttgactatcgaggatccaccaccaaactcactcacctggctgttggcaggc---------cactagctgttgggcctagaca-----tcactggctcgtgggccttccc-acagggccactta----------------------acagtgtaagggctctaagagaaagg----tagagagggcaagcaccc--gagataaaagccacagtctctttgtaaccaaatcttggaagtgacatctcatcactttttccatattctgtgcattcaaagtgagtcactaggtccagcctata--aggggaagagaatacacaagggtatgaatatcaggaggtggggatcactagggaccatcttagatgctgcctatcacaGACTAGCTGAACGTATtacaacatattggttaagagtactgactctgaagcaagactgcgca-----tttgaatcTTCCTTTCCCGTTGTAAGATGAA---------ACAAGACGATAGTAATGAAAGCATCAGACCCAGTGCCTCCTATCATAGGAGGCACTCGGGAATTTGTTTT--CTTATCTCTTCCAATCCCAACTGCCTTTAACAATC--GAAAATTTCTCCAGT-TTGAATATTATCTGCAAACATCCAATATTAGAG--CAACTTGTTGAGCAACACGCAAAA--ATGGTTTTGATTTTCAATGAATCCAAGAAACTTATTTTTAATAACCTTAATTTaataaaattaaacacaaaaataaaa--ataaatatctaaaaataCTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80702846 855 + 95678458 tatctatttctatgtaacaattcattttcaatcactgtagcttaaaacaatatttattatct--cagtttatgtggatcagaaatccagctggg--taagctaagtgcctctggttcaaggactctcacaaggctgcagtcaaggtgttggctgcggctgcagtca--ttaaggcttgactatcgaggatccgccaccaaactcactcacccggtttttggcaggc---------cactagctattaggcctagaca-----tctttggctcatgggccttccc-acagggctactta----------------------acagtgtaggggctctgagagaaagg----tagagagggcaaacaccc--aagataaaagccacagtctctttgtaaccaaatcttggaagtgacatctcatagctttttccatattctatgcattcaaagtgagtcactaggtccagcctata--aggggaagagaatacac-agggtatgaatatcaggagatggggatcaccagggaccatcttagatgctgcctatcataGACCAGCTGAACGTATtacaatgtattggttaagagtactgactctgaagcaagactgcaca------ttgaatcttccttctctgcTGTAAGATGAA---------ACAAGACAATAGTAATGAAAGCA--------------TCCTATCATAGGAGGCACTCGGGAATTTGTTTT--CTTATCCCTTCCAATCCCAACTGCCTTTAACAATT--GAAAATTTCTCCAGT-TTGAATATTATCGGCAGATATCCAATATTACAG--CAACTTGTTGAGCAACAAGCAAAA--ATGGTTTTGATTTTCAATGACTCCAAGAAACTTATTTTTAATAACCTTAATTTaataaaattaaacacaaaaataaaa--ataaatatctaaaaataCTG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81129417 855 - 96509753 tatctatttctatgtaacaattcattttcaatcacagtagcttaaaacaatatttattatct--cagtttatgtggatcagaaatccagctggg--taagctaagtgcctctggttcaaggactctcacaaggctgcagtcaaggtgttggctgcggctgcagtca--ttaaggcttgactatcgaggatccgccaccaaactcactcacccggtttttggcaggc---------cactagctattaggcctagaca-----tctttggctcatgggccttccc-acagggctactta----------------------acagtgtaggggctctgagagaaagg----tagagagggcaaacaccc--aagataaaagccacagtctctttgtaaccaaatcttggaagtgacatctcatagctttttccatattctatgcattcaaagtgagtcactaggtccagcctata--aggggaagagaatacac-agggtatgaatatcaggagatggtgattaccagggaccatcttagatgctgcctatcataGACCAGCTGAACGTATtacaatgtattggttaagagtactgactctgaagcaagactgcACA------TTGAATCTTCCTTCCCTGCTGTAAGATGAA---------ACAAGACAATAGTAATGAAAGCA--------------TCCTATCATAGGAGGCACTTGGGAATTTGTTTT--CTTATCCCTTCCAATCCCAACTGCCTTTAACAATT--GAAAATTTCTCCAGT-TTGAATATTATCGGCAGATATCCAATATTACAG--CAACTTGTTGAGCAACAAGCAAAA--ATGGTTTTGATTTTCAATGACTCCAAGAAACTTATTTTTAATAACCTTAATTTaataaaattaaacacaaaaataaaa--ataaatatctaaaaataCTG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76385532 833 + 90941950 tATCTATTTCTATGTAACAATTCATTTTCAATcacagtagcttaaaacaatatttattatct--cagtttatGCGGATCAGAAATCCAGCTGGG--TAAGCTAAGTGCCTCTGGTTCAAGGACTCTCACAAGGCTGCAGTCAAGGTGTTGGCTGCGGCTGCAGTCA--TTAAGGCTTGACTATCGAGGATCCGCC-----ACTCACTCACCAGGTTTTTGGCAGGC---------CACTAGCTATTAGGCCTAGACA-----TCTTTGGCTCGTGGGCCTTCCC-ACAGGGCTACTTA----------------------ACAGTGTAGGGGCTCTGAGAGAAAGG----TAGAGAGGGCAAACACCC--AAGATAAAAGCCACAGTCTCTTTGTAAGCAAATCTTGGAAGTGACATCTCATAGCTTTTTCCATATTCTATGCATTCAAAGTGAGTCACTAGGTCCAGCCTATA--AGGGGAAGAGAATACAC-ACGGTATGAATATCAGGAGATGGGGATCACCAAGGACCATCTTAGATGCTGCCTATCATAGACCAGCTGAACGTATTACAATGTATTGGTTAAGAGTACAGACTCTGAAGCAAGACTGCACA------TTGAATCTTCCTTCCCTGCTGTAAGATGAA---------ACAAGGCAATAGTAATGAAAGCA--------------TCCTATCATAGGAGGCACTCGGGAATCTGTTTT--CTTATC-----------------CCTTTAACAATC--GAAAATTTCTCCAGT-TTGAATATTATCAGCAGATATCCAATACTACAG--CAACTTGTTGAGCAACAAGCAaaa--atggttttgattttcaatGACTCcaagaaacttatttttaataaccttaatttaataaaattaaacacaaaaataaaa--ataaatatctaaaaatactG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18654457 854 + 33263144 tatctatttctatgtaacaattcattttcaatcacagtagcttaaaacaatatttattatct--cagtttatgcggatcagaaatccagctggg--taagctaagtgcctctggttcaaggactctcacaaggctgcagtcaaggtgttggctgcagctacagtca--ttaaggcttgactatcgaggatccgccaccaaactcactcaccaggtttttggcaagc---------cactagctattaggcctagaca-----tctttggctcgtgggccttccc-acagggctactta----------------------tcagtgtaggggctctgagagaatgg----tagagagggcaaacaccc--aagataaaagccacagtctctttgtaaccaaatcttggaagtgacatctcatagctttttccacattctatgcattcaaagtgagtcactaggtccagcctata--aggggaagagaatacac-agggtatgaatatcaggagatggggatcaccagggaccatcttagatgctgcctatcataGACCAGCTGAACGTATtacaatatattggttaagagtactgactctgaagcaagaatgcACA------TTGAATCTTCCTTCCCTGCTGTAAGATGAA---------ACAAGACAATAGTAATGAAAGCA--------------TCCTATCATAGGAGGCACTCGGGAATTTGTTTT--CTTATCCCTTCCAAGCCCAGCTGCCTTTAACAATC--GAAAATTTCTCCAGT-TTGAATATTATCGGCAGATATCCAAAACTACAG--CAACTTGTTGAGCAACAAGC-AAA--ATGGTTTTGATTTTCAATGACTCCAAGAAACTTATTTTTAATAACCTTAATTTAAtaaaattaaacacaaaaataaaa--ataaatatctaaaaataCTG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198359859 856 + 210400635 tatctatttctatgaaacaattcattttcaatcatagtagcttaaaacaacatttatcagct--cagtttatgtggatcagaaatccagctggg--taagctaaatgcttctggttcagagtctttcacaaggctgcagtcaaggtgttggttggggctgcagtca--ttaaagcttgactatcaaggatccaccaccaaattcgctcacctggctgttggcaggc---------cactagctattaagcctgaaca-----tcgctggctcatgggccttcccaacagggctactta----------------------atagtgaaggggctctgagagaaacg----tagagagggtaagcaccc--aagataaaagccacaatctctttgtaaccaaatcttggaagtgacatctcatcactttttccatactctatacattcaaagtgagacactaggtccagcctata--aggggaagagaatacacaagggcatgaatatcaggaggtggggatcactaaggaccatcttagaCG----TAATCATAAGCTAGCTGAATGAATtacaacatattggttaagagcattgactctgaagcaagactgAGCA-----TTTTAATCTTTCTTCCTCATTGTAAGATGAA---------ACAAGACAATAGTAATAAAAGCACCTGTCCCAGCGCCTCACATCATAGGAGGCACTCAGGAATTTGTTTT--CTTATCCCTTCCAATCCCAACTGTCTTTAACAATT--GAAAATTTCTCCAGT-TTGAATATTATCTGCAAACATCCAATAGTAGAG--CAACTTGTTGAGCAGAATGCAAAA--ATGGTTTTGATTTTCAATGAATCCAGTAAACTTATTTTTAATAACC-----TTAACaaaattaaaca-------aaaa--ataattatttaaaaatatta i calJac3.chr1 C 0 I 343 s canFam3.chr10 40972233 918 - 69331447 tatctttttctgtgttacaaatcactctcaaacacaacagctcaagac---atttattatctcacagtttttgtgggccaggattccaggtgaggcttagctgggtgcctctggctcggagtctgtcat-aggctgcaagaagggtgctggctagggccgcagtcatctccaggctggactggcacagatctgctgccaagctcactcatctggctgttggcaggctcaggctctcactggctgttggccctagacaccagctcctggacatgtgggcctctct-gcagggctactcacaacatggcagtctgtttcttccaaatataagggctctgagagagagagacctagag-gggcacatgcccaaaagatgaaagccacag--tctttatcataaactcttggaagtgatatcctgtcacgtttgccacattctattagttcgaagtgagtcactaggcccatcctatactgaaagaagaaatgacacaaggtcatggacatcaggaggtgggaatcactggggaccatcttggTT------TATCACAGACCAGTTGAAAGcattataacatactggttaagagtactgactctgaagcaagactactggctgggtctgactcttgcttctgAATCCTAAGATGAAATATGGAATATAAAATAATTGTTGTGAAAGGA-CTGACC-------TCATA-CACAGGAGGCACTAGGGAATTTCTTTTCCCTTCTCCCTTACAATCTCAACTGTCTTTAACAATCTTGAAAATTTCTCTGGTATTGGATGTAATCTGCAAACATCCAGTGCCAGAGACCATGGTATTGAGCAACATGCAAAAATATGGTTTTGACTTTCAATAAGGCCAGGAAACTTATTTTTAATAAACGGAAT------AAATTAAACAAGAAAACAAAAGGATAAACATCCAGAATTAATG i canFam3.chr10 C 0 C 0 e mm10.chr15 77187679 10369 + 104043685 I a score=212017.000000 s hg38.chr22_KI270876v1_alt 206168 68 + 263666 AAATATAGCAGAGGAGAA---CACAGACACAGCAACAACTGATCTTCCC-A-ACACGTGCTCTGA-CCACCTAC------------ s panTro4.chr22 34585776 68 + 49737984 aaatataGCAGAGGAGAA---CATAGACACGGCAACAACTGATCTTTCC-A-ACACGTGCTCTGA-CCGCCTAC------------ i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31005786 68 + 46535552 AAATATAGCAGAGGAGAA---CATAGACACAGTAACAATTGATCTTCCC-A-ACACGTGCTCTAA-CCCCCCAC------------ i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100559379 69 - 115148730 AAATATAGCAGAGGAGAA---CATAGACACAGTAACAATTGATCTTCCC-A-ACACGTGCTCTGAGCCCCCCAC------------ i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80703701 68 + 95678458 AATTATAGCAGAGGAGAA---CATAGACACATTAACAATTGATCTTCCC-A-ACACGTGCTCTGT-CCCCCCAC------------ i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81130272 68 - 96509753 AATTATAGCAGAGGAGAA---CATAGACACATTAACAATTGATCTTCCC-A-ACACGTGCTCTGT-CCCCCCAC------------ i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76386365 68 + 90941950 AATTATAGCAGAGGAgaa---catagacacagtaacaattGATCTTCCC-A-ACATGTGCTctgt-ccccccac------------ i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18655311 68 + 33263144 AATTATAGCAGAGGAGAA---CATAGACACAGTAACAATTGATCTTCCC-A-ACACGTGCTCTGT-CCCCCCAC------------ i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198361058 72 + 210400635 AAATATAGCAGAGGAGAACATCATAGACACAGTAACAACTGATCTTCCCAA-ACACATGCTCTGA-GCCCCCAC------------ i calJac3.chr1 I 343 C 0 s canFam3.chr10 40973151 81 - 69331447 AAATATAGCAGAGGAGAA---TATACACAAAGGAGCAACTGTTCCCCCT-ATATACATGCCCTCT-ACCCCAATAAAGCCATCTGC i canFam3.chr10 C 0 I 108 e mm10.chr15 77187679 10369 + 104043685 I a score=1767596.000000 s hg38.chr22_KI270876v1_alt 206236 602 + 263666 CCCTG------------------------------------------------------------------------------------CCCAG---CCTTTGGCATCT--------ACTGTACTGTTTAGTGAGACCTTCAGTCCCACCTTGCCAAAAAAA---CCATGATGTTTTTTACCTAACTGGCAATTTCAAGTACTGTACAAGAAGCAGAATAAATAAATCATTAAGAATA-TTTTATGTGAATGTCAATTTATCTAAGAAAtaatacttaacaattctactgggaaa-aat--catgcccattttacagatgagacacaa-gagcataaagatcatctgtct------aatcatatggcaggctaatgactaggccagggacagaaATGTAACTAGCGTATGATGAGAAACACAATGAAACCATAGTCAGT--TTTCTGATTTTCATGGATACAAGAATCTTG---------CCAGTGATTAAA----------GTTCATCTCACACACTCAGGAAAAATAATTTGACAGTTATTTTAGGGAATGAAAGCTAGGTCGTTTCCCCGCATAAACAACATAAGCTTCTGACTCTTACCTCCCTCTTGATTTATTTAACCTCTGAAT----AGATGGTCTATATTTAAATAAGCAAGTAAAACACCGTACAAGTTAATACACAATGAAG-----ACAGTACAGAGC-CTATAGATTTGGGTTAAGTGAAACCCAAACC s panTro4.chr22 34585844 561 + 49737984 CCCTG------------------------------------------------------------------------------------CCCAG---CCTTTGGCATCT--------ACTGTACTGTTTAGTGAGACCTTCAGTCCCACCTTGCCAAAAAAA---CCATGATTTTTTTTACCTAACTGGCAATTTCAAGTACTGTACAAGAAGCAGAATAAATAAATCATTAAGAATA-TTTTATGTGGATGTCAATTTATCTAAGAAAtaatacttaacaattctactggggaa-aat--catgcccattttacagatgagacacaa-gagcataaagatcatctgtct------aatcatatggcaggctaatgactaggccaggGACAGAAATGTAACTAGCATATGATGAGAAACACAATGAAACCATAGTCAGT--TTTCTGATTTTCATGGATACGAGAATCTTG---------CCAGTGATCAAA----------GTTCATCTCACACACTCAGGAAAAATAATTTGACAGTTATTTTAGGGAATGAAAGCTAGGTC---------------------------------------------TTGATTTATTTAACCTCTGAATGAATAGATGGTCTATATTTAAATAAGCAAGTAAAACACCGTACAAGTTAATACACAATGAAG-----ACAGTACAGAGC-CTATAGATTTGGGTTAAGTGAAACCCAAACC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31005854 558 + 46535552 CCCTG------------------------------------------------------------------------------------CCCAG---CCTTTGGCATCT--------ACTGTACTGTTTAGTGAGACCTTCAGTCCCATCTTGCCAAAAAAA----AACAATGTTTTTTACCTAACTGGCAATTTCAAGTACTGTACAAGAAGCAGAATAAATAAATCATTAAGAATA-TTTTATGTGGATGTTAATTTATCTAAGAAAtaatacttaacaactctactgggaaataat--catgcctattttacagatgagacacaa-gagcataaagatcatgtgtct------aatcatatggcaggctaatgactaggccaggGACAGAAATGTAACTACCATATGATGAGAAACACAATGAAACCATAGTCAGT--TTTCTGATTTTCATGGATACAAGAATCTTG---------CCAGTGATTAAA---------GGTTCATCTCACACACTCAGGAAAAATAATTTGACAGTTATTTTAGGGAATTAAAGCTAGGTC---------------------------------------------CTGATTTATTTAACCTCTGAAT----AGATGGTCTATATTTAAATAAGCAAGTAAAACACTGCACAAGTTAATACACAATGAAG-----ACAGTACAGAGC-CTACAGATTTGGGTTAAGTGAAACCCAAACC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100559448 557 - 115148730 CCCTG------------------------------------------------------------------------------------CCCAG---CCTTTGGCATCT--------ACTGTACTGTTTAGTGAGACCTTCAGTCCCATCTTGCCAAAAAAA---CCATAATGTTTTTTACCTAACTGGCAATTTCAAGTACTGTACAAGAAGCAGAATAAATAAATCATTAAGAATATTTTTATGTGGATGTCAATTTATCTAAGGAACAATACTTaacaattctactgggaaataat--catgcccattttacagatgagacacaa-gcgcataaagatcatgtgtct------aatcatatggcaggctaatgactaggccaggGACAGAAATGTAACTAGCATATGATGTGAAACACAATGAAACCATAGTCAGT--TTTCTGATTTTCATGGATACAAGAATCTTG---------CCAGTGATTTAA---------GGTTCATCT--CACACTCAGGAAAAATAATTTGACAGTTATTTTAGGGAATGAAAGCTAGGTC---------------------------------------------TCGATTTATTTAACCTCTGAAT----AGAT-GTCTATATTTAAATAAGCAAGTAAAACACCATACAAGTTAATACACAATGAAG-----ACAGTACAGAGC-CTATAGATTGGGGTTAAGTGAAACCTAAACC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80703769 557 + 95678458 CCCTG------------------------------------------------------------------------------------CCCAG---CCTTTGGCATCT--------ACTGTACTGTTTAGTGAGACTTTCAGTCCCATCTTGCCAAAAAAA---ACATAATTTTTTTTACCTAATTGGCAATTTCAAGTACTGTACAAGAAGCAGAATAAATAGATCATTAAGAATATTTTTATGTGGATGTCAATTTATCTAAGAAATAATACTGaacaattctactgggaaataat--catgcccattttacagatgagacgcaa-gagcagaaagatcatgtgtct------aat-acacagcaggctaatgactaggccaggGACAGAAATGTAACTAGCATATGATGTGAAACACCATGAAACCACAGTCAGT--TTCCTGATTTTCATGGACACAAGAATCTGG---------CCAGTGATTAAA--------GGGTTCACCT--CACACTCAGGAAAAATAATTGGACAGTTATTTTAGGGAATGAAAGCTCAGTC---------------------------------------------TTTATTTATTTAACCTCTGAAT----CAATGGTCTATATTTAAACAAGCAAGT-AAACACTATACAAGTTAATACACAATTAAG-----ACAGTACAGAGC-CTATAGATTTGGGTTAACTGAAACCCAAACC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81130340 557 - 96509753 CCCTG------------------------------------------------------------------------------------CCCAG---CCTTTGGCATCT--------ACTGTACTGTTTAGTGAGACTTTCAGTCCCATCTTGCCAAAAAAA---ATATAATTTTTTTTACCTAATTGGCAATTTCAAGTACTGTACAAGAAGCAGAATAAATAGATCATTAAGAATATTTTTATGTGGATGTCAATTTATCTAAGAAATAATACTGaacaattctactgggaaataat--catgcccattttacagatgagacgcaa-gagcagaaagatcatgtgtct------aat-acacagcaggctaatgactaggccagggacagaaATGTAACTAGCATATGATGTGAAACACCATGAAACCACAGTCAGT--TTCCTGATTTTCATGGACACAAGAATCTGG---------CCAGTGATTAAA--------GGGTTCACCT--CACACTCAGGAAAAATAATTGGACAGTTATTTTAGGGAATGAAAGCTCGGTC---------------------------------------------TTTATTTATTTAACCTCTGAAT----CAATGGTCTATATTTAAACAAGCAAGT-AAACACTATTCAAGTTAATACACAATTAAG-----ACAGTACAGAGC-CTATAGATTTGGGTTAGCTGAAACCCAAACC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76386433 557 + 90941950 ccctg------------------------------------------------------------------------------------cccag---cctTTGGCATCT--------ACTGTACTGTTTAGTGAGACTTTCAGTCCCATCTTGCCaaaaaaa---aCGTAAttttttttACCTAATTGGCAATTTCAAGTACTGTACAAGAAGCAGAATAAATAGatcattaagaatatttttatgtgGATGCCAATTTATCTAAGAAATAATACTGAACAATTCTACTGGGAAATaat--catgcccattttacagatgagacgcAA-GAGCAGAAAGATCATGTGTCT------AAT-ACACAGCAGGCTAATGACTAGGCCAGGGACAGAAATGTAACTAGCATATGATATGAAACACCATGAAACCACAGTCAGT--TTCCTGATTTTCATGGACACAAGAATCTGG---------CCAGAGATTAAA--------GGGTTCACTT--CAcactcaggaaaaataattagacAGTTATTTTAGGGAATGAAAGCTcggtc---------------------------------------------tttatttatttaacctctGAAT----CAATGGCCTATATGTAAACAAGCAAGT-AAACACTATACAAGTTAATACACAATTAAG-----ACAGTACAGAGC-CTATAGATTTGGGTTAAGTGAAACccaaacc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18655379 555 + 33263144 CCCTG------------------------------------------------------------------------------------CCCAG---CCTTTGGCATCT--------ACTGTACTGTTTAGTGAGACTTTCAGTCCCATCTTGCCAAAAAAA---AATT--TTTTTTTTACCTAATTGGCAATTTCAAGTACTGTACAAGAAGCAGAATAAACAGATCATTAAGAATATTTTTACGTGGATGTCAATTTATCTAAGAAATAATACTGaacaattctactgggaaataat--catgcccattttacagatgagacgcaa-gagcagaaagatcatgtgtct------aat-acacagcaggctaatgactaggccagggacagaaATGTAACTAGCATATGATGTGAAACACCATGAAACCACAGTCAGT--TTCCTGATTTTCATGGACACAAGAATCTGG---------CCAGTGATTAAA--------GGGTTCATCT--CACACTCAGGAAAAATAATTGGACAGTTATTTTAGGGAATGAAAGCTCGGTC---------------------------------------------TTTATTTATTTAACCTCTGAAT----CAATGGTCTATATTTAAACAAGCAAGT-AAACACTATACAAGTTAATACACAATTAAG-----ACAGTACAGAGC-CTATAGATTTGGGTTAAGTGAAACCCAAACC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198361130 558 + 210400635 TCCTA------------------------------------------------------------------------------------CCTGG---CCTTTGGCATCT--------ACTATACCATTTAGTGAGACTTTCAGTCCCATCTTGCCAAAAAAA-----ATAATGCTTTTTACCTAATTGGCAATTTCAAGTACTGTACAAGAAGCAGaataaataaa----taagaatatttttatttaGATGTCAATTTATATCAGCAATAATACTAAACAATTCTACAAGGAAATAAT--CAAGCCCACTTTACAGATAAGACACAA-GAGCATAAAGATCATGTGTCT------AATCATATAGTAGGTTAATGACTAGGCAAGGGACAGAAATGTAACTAGCATATGATGTGAAACACTATGAAACCATAGTCCGT--TTTCTGATTTTCATGGATACAAGAATCTTG---------CTAAAACTAAAACCTTTAAAGGGTTCATCT--CACATTC---TAAAATAATGTGACAGTTATTTTAGAAAATGAAAGAGAGGTC---------------------------------------------TTGATTTATTTAACTTCTGAAT----TAATGGTCTATATTTAAATGAGCAAGTAAAACATCATACAAGTTAATACACAATTAAG-----ACAGTACAGAGC-TTATAGATTTGGGTTAAGTGAAACCCAAACC i calJac3.chr1 C 0 C 0 s canFam3.chr10 40973340 655 - 69331447 ccctgagcaaggagcacaatgcagggttcaatcccaggattctgggattatgacctgaaccaaaggcaaacgcttaaccaactgagccacccaggcaccccTGACATCTGCTTTTAAACTGTAATGTTT-GTGAGACTTTCAATTCAATCTTAACAAAAATATACATATACTGCTTTTTGTGTAACTAACAACTAC-----CAGGGCAAGAAACAGAATAA----AGCATTAAGAATATTTTTATTTAGATGCCCATTCATCTGAGAAATAGTATTcaacaatgcaactagtaagtgacagcattcccattttacagaagagacacaaggggcataaaga-catgtggcttgttgaaatcacacagcaggttaagg-------ctggaacagaactataactagCATATGATGTAATACACAATGAAGCTATAATCAGTTGTTTCTGATTTTCATGGATATGGCAATCTAGTTACAACAACCAGTGATTAAA--------GGGTTCATTT--CACACTCAGGAAAAGTA-----ACAGTTATTTTAAAGAATGAAAGGTAGGCT---------------------------------------------TTGATTAATTCAATGTCTAAAT----TAATGATCTAGATTCATATAAGCAAGTAAAACACCAAATGAGTTAATACACAAGTAAGAGGTAAGAGTACAGAACTCTACAGAT-----TTAAGTGAAATCAAAAGC i canFam3.chr10 I 108 C 0 e mm10.chr15 77187679 10369 + 104043685 I a score=694854.000000 s hg38.chr22_KI270876v1_alt 206838 321 + 263666 TAAttttttttttttttttttttttttttttttt--gagacagagtctcactctgttgcccaggctggagtgcagtggcacgatctgggctcactgcaacctccacctcccgggtccacgccattctcctgcctcagcctcctgagtagctggaactacaggcacccaccaccacatccggctaattttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctgacctcgtgatccgcccacctcagcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggccCAAACA s panTro4.chr22 34586405 323 + 49737984 TAAtttttttttttttttttttttttttttttttttgagacagagtctcactctgttgcccaggctggagtgcagtggcacgatctcggctcactgcaacctccacctcccgggttcacgccattctcctgcctcagcctcctgagtagctgggactacaggaacccaccaccacacccggctaattttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctgacctcgtgatctgcccacctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggccCAAACC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31006412 311 + 46535552 TAAttttttttttttttttttttt------------gagacagagtttcgctctgtcacccaggctggagtgcagtggcacgatctgggctcgctgcaatctccacctcctgggttcacaccattctcctgcctcagcctcctgagtagctgggactacaggcacccgccaccacacccagctaattttttgtatttttagtagagacgggttttcaccgtgttagccagaatggtctcgatctcctgaccttgtgatccgcccacctcggcctcccaaagtgctgggattacaggcgtgagccaccacgcctggccCAAACC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100560005 319 - 115148730 TAAttttttttttttttttttttttttttttt----gagacagagtcttgctctgtcgcccaggctggagtgcagtggtgcgatccgggctcactgcaacctccacctcctgggttcaagccattctcctgcctcagcctcctaagtagctgggactacaggcacccgccaccacacccgggtaattttttgtatttttagtagagacggggtttcaccatgttagctaggatggtctcgatctccagacctcgtgatccgcccatctcggcctcccaaagtgctaggattacaggtgtgagccaccatgcccggccCAAACC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80704326 300 + 95678458 TAA---------tttttttttttt------------gagacggagtcttgctctgtcacccaggctggagtgcagtggcacaatctcggctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccaccaccatg-ccagctaattttttgtatttttagtagagacagggtttcaccgta-tagctaggatggtgtcgatctcctgacctcatgatctgcctgcctcggcctcccaaagtgctgggattacaggtgtgagccaccgcacctggccCAAACC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81130897 301 - 96509753 TAA--------ttttttttttttt------------gagacggagtcttgctctgtcacccaggctggagtgcagtggcacaatctcggctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccaccaccatg-ccagctaattttttgtatttttagtagagacagggtttcaccgta-tagctaggatggtgtcgatctcctgacctcatgatctgcctgcctccgcctcccaaagtgctgggattacaggtgtgagccaccgcacctggccCAAACC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76386990 306 + 90941950 taa----ttttttttttttttttt------------gagatggagtcttgctctgtcgcccaggctggagtgcagtggcgcaatctcggctcactgcaagctccgcctcctgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccaccaccacgcccagctaattttttgtatttttagtagagacagggtttcaccgta-tagctaggatggtctcgatctcctgacctcatgatctgcctgcctcggcctcccaaagtgctgggattacaggtgtgagccaccgcacctggcccaaacc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18655934 304 + 33263144 TAA------ttttttttttttttt------------gagacggagtcttgctctgtcgcccaggctggagtgcagtggcgcaatctcggctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccaccaccacgcccagctaattttttgtatttttagtagagacagagtttcaccgta-tagctaggatggtctcgatctcctgacctcatgatctgcctgcctcggcctcccaaagtgctgggattacaggtgtgagccaccgcacctggccCAAACC i chlSab2.chr19 C 0 C 0 e mm10.chr15 77187679 10369 + 104043685 I e canFam3.chr10 40973995 0 - 69331447 C e calJac3.chr1 198361688 0 + 210400635 C a score=886657.000000 s hg38.chr22_KI270876v1_alt 207159 260 + 263666 CAATATTTTAGTTGAACACTTTGCTACCCAGAC----AGTTCATTATACCTAGAATATCCAATTAACTTTTCAACCAATATCTGTGGAATGTCTATTCTATGCTGGCCTTCAATTACAAGTAACATATGTTCTCTTATTTAATAATAGTGAAAGATGCT-------AAAAAAAAATGTGTGAAGAGGAGCACCAAGTTCTCACATTCAGAAAAACCTATTAATTCTAAACAGGAATGT----AATGCTTTCAACTGGATTACAACTTTTAAAAGC s panTro4.chr22 34586728 259 + 49737984 CAATATTTTAGTTGAACACTTTGCTACCCAGAC----AGTTCATTATACCTAGAATATCCAATTAACTTTTCAACCAATATCTGTGGAATGTCTATTCTATGCTGGCCTTCAATTACAAGTAACATATGTTCTCTTATTTAATAATAGTGAAAGATGCT-------AAAAAAAA-TGTGTGAAGAGGAGCACCAAGTTCTCACATTCAGAAAAACCTATTAATTCTAAACAGGAATGT----AATGCTTTCAACTGGATTACAACTTTTAAAAGC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31006723 264 + 46535552 CAATATTTTAGTTGAACACTTTGCTACCCAGAC----AGTTCATTATACCTAGAATATCCAATTAACTTTTCAACCAATATCTGTGGAATGTCTATTCTATGCTGGCCTTCAATTACAAGTAACATATGTTCTCTTATTTAATAATAGTGAAAGATGCT-------AAAAAAAAATCTGTGAAGAGGAGCACCAAGTTCTAACATTCAGAAAAACATATTAATTCTAAACAGGAATGTAATGAATGCTTTCAACTAGATTACAACTTTTAAAAGC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100560324 260 - 115148730 CAATATTTTAGTTGAACACTTTGCTACCCAGAC----AGTTCATTATACCTAGAATATCCAATTAACTTCTCAACCAATATCTGTGGAATGTCCATTCTATGCTGGCCTTCAATTACAAGTAACATATGTTCTCTTATTTAATAATAGTGAAAGATGCT-------AAAAAAAAATTTGTGAAGAGGAGCACCAAGTTCTCACATTCAGAAAAACATATTAATTCTAAACAGGAATGC----AATGCTTTCAACTAGATTACAACTTTTAAAAGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80704626 263 + 95678458 CATTATTGTAGTTGAACACTTTGCTACACAGAC----AGTTCATTATACCTAGAATATCCAATTAACTTCTCAACCAATATCTGTGGAATGTCTATTCTATGCTGGCCTTCAATTACAAGTAACATATGTTCTCTTATTTAATAATAGTAAAAGATGCT----AAAAAAAAAAAATTTGTGAAGCAGAGCACCAAGTTCTCACATTCAGAAAAAGATACTAATTCTAAACAGGAATGC----AATGCTTTCAACTAGATTACAACTTTTAAAAGC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81131198 264 - 96509753 CATTATTGTAGTTGAACACTTTGCTACACAGAC----AATTCATTATACCTAGAATATCCAATTAACTTCTCAACCAATATCTGTGGAATGTCTATTCTATGCTGGCCTTCAATTACAAGTAACATATGTTCTCTTATTTAATAATAGTAAAAGATGCT---AAAAAAAAAAAAATTTGTGAAGCAGAGCACCAAGTTCTCACATTCAGAAAAAGATACTAATTCTAAACAGGAATGC----AATGCTTTCAACTAGATTACAACTTTTAAAAGC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76387296 267 + 90941950 CATTATTGTAGTTGAACACTTTGCTACACAGAC----AATTCATTATACCTAGAATATCCAATTAACTTCTCAACCAATATCTGTGGAATGTCTATTCTATGCTGGCCTTCAATTACAAGTAACATATGTTCTCTTATTTAATAATAGTAaaagatgctaaaaaaaaaaaaaaaaattttgaagcgGAGCACCAAGTTCTCACATTCAGAAAAAGATACTAATTCTAAACAGGAATCC----AATGCTTTCAACTAGattacaacttttaaaagc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18656238 264 + 33263144 CATTATTGTAGTTGAACACTTTGCTACACAGAC----AATTCATTATACCTAGAATACCCAATTAACTTCTCAACCAATATCTGTGGAATGTCTATTCTATGCTGGCCTTCAATTACAAGTAACATATGTTCTCTTATTTAATAATAGTAAAAGATGCT---AAAAAAAAAAAAATTTGTGAAGCAGAGCACCAAGTTCTTACATTCAGAAAAAGAAACTAATTCTAAACAGGAATGC----AATGCTTTCAACTAGATTACAACTTTTAAAAGC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198361688 255 + 210400635 CAATATTTTAGTTGAACACTTTGCTACACAGAC----AGTTCATTATACTTAGAATACCCAATTAACTTTTCAACCAATATCAGTGGAATGTCCATTCTATGCTGGCCTTCAATTACAAGTAACATATAGTATCTTATTTAATAATAGTGAAGGATGCT-------AAAAAAAAAT-TGTGAAGAAGAGCACCAAGCTCTCCCATTCAGAAAACGGTATTAATTCTAAACAGGAATGC----AA----TTTAACTAGACTACAACTTTTAAAAGC i calJac3.chr1 C 0 C 0 s canFam3.chr10 40973995 258 - 69331447 CAGTATTTTAGTTGGACACTCTGCTACATACACTCTTAACTCATTACCCTAAGAATATCTAATTAACCTTTCAATCAGTATTTGT-GAGTACCTATTCTCTGATGGCCTTATGTTACAAGTACTATATGTTATCTCATTTAATGACAGTGAAAGATTCT-------GAAAAAGCGTCTTTGAAGGAGAACAGCAAG--CTCCCATTCAGAAGAGGATATTAATTCTAAAC---AATGC----AGTGCTTGAAACCAGATCCTAAGTTTCAAAAGC i canFam3.chr10 C 0 I 6 e mm10.chr15 77187679 10369 + 104043685 I a score=1151342.000000 s hg38.chr22_KI270876v1_alt 207419 421 + 263666 AATATagtcatgtgctgcttaatgccaggcacacatcctgtgaaatgtgttgttaggtgatttcatagttgtgagatcatcatagagtgtactt--acataaactcagatggcctagcctactacacacctcggctatacggtatgtacgacctattgctcttaggctacaaacatgtacagcaggtgactactgaatactctactgtgggtaatcgtaacacaatggtatttatgtacctaaacacag-agaagggacagtaaagatacaattgttatttatacactcttatgaaaccaccgtAAGATTGAACTGCATTGACTGATGCCTTCAACTGCATTGACTGATGCATTGAACTGCACTGATGAATGATGCAGTTCATAGCT-ACCTGAAACGTCTTTATGTGGTACACGACTGTACAGT s panTro4.chr22 34586987 407 + 49737984 AATATagtcatgtgctgcttaatgccaggcacacatcctgtgaaatgtgttgttaggtgatttcatagttgtgagatcat---agagtgtactt--acataaactcagatggcctagcctactacacacctcggctatacggtatgtacgacctattgctcttaggctacaaacatgtacagcaggtgactactgaatactctactgtgggtaatcgtaacacaat-----------acctaaacacag-agaagggacagtaaagatacaactgttatttatacactcttatgaaaccactgtAAGATTGAACTGCATTGACTGATGCATTCAACTGCATTGACTGATGCATTGAACTGCACTGATGAATGatgcggttcatagct-acctgaaacgtctttatgtggtacacgactgTACAGT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31006987 399 + 46535552 AATATagtcgtgtgctgcttaatgccaggcacacatcctgtgaaatgtgttgttaggtgatttcacagttgtgagatcatcatagagtgtactt--acataaactcagatggcctagcctactacacacctcggctatacggtatgtacgacctattgctcttaggctacaaacatgtacagcaggtgactactgaatactatactgtgggcaatcgtaacacaatggtatttatgtacctaaacacag-aaaagggacagtaaagatacaattgttatttatacactcttatgaaaccaccgtaagattgaactgcgttgactgatgcgttcaactgcat----------------------tgatgaatgatgcggttcatagct-acctgaaacgtctttatgtggtacatgactgAACAGT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100560584 398 - 115148730 AATATagtcatgtgctgcttaatgccaggcacacatcctgtgaaatgtgttgttaggtgatttcatagttgtgagatcatcatagagtgtactt--acataaactcagatggcctagcctactacacacctcggctatacggtatgtacgacctattgctcttaggctacaaacatatacagcaggtgactactaaatactatactgtgggcaatcgtaacacaatggtatttatgtatctaaacacag-aaaagggacagt-aagatacaattgttatttatacactcttatgaaaccaccgtaagattgaactgcattgactgatgcgttcaactgcat----------------------tgatgaatgatgcggttcatagct-acctgaaacgtctttatgtggtacatgactgTATAGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80704889 395 + 95678458 AATATagtcatgtgctgcttaatgccaggaacacatcctgtgaaatgtgttgttaggtgatttcatagttgtgagatcatcatagagtgtactt--acataaactcaga-----tagcctactacacacctaggctatacggtatgtatgacctattcctcttaggctacaaacatgtacagcatataactgctgaatactagactgtgggcaatcgtaacacaatggtatttatgtatctaaacacagaaaaagggacagtaaagataccattgttatttatacactcttaggaaaccaccgtaggattgaactgcattgactgatgcgttcaactgtat----------------------tgatgaatgatgcggttcatagct-aactgaaacgtctttatgcggtacatgactgTACAGT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81131462 395 - 96509753 AATATagtcatgtgctgcttaatgccaggaacatatcctgtgaaatgtgttgttaggtgatttcatagttgtgagatcatcatagagtgtactt--acataaactcaga-----tagcctactacacacctaggctatacggtatgtatgacctattcctcttaggctacaaacatgtacagcatatgactgctgaatactagactgtgggcaatcgtaacacaatggtatttatgtatctaaacacagaaaaagggacagtaaagataccattgttatttatacactcttaggaaaccaccgtaggattgaactgcattgactgatgcgttcaactgtat----------------------tgatgaatgatgcggttcatagct-aactgaaacgtctttatgcggtacatgactgTACAGT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76387563 400 + 90941950 aATATAGTCATATGCTGCTTAATGCCAGGAACACATCCTGTGAAATgtattgttaggtgatttcatagTTGTGAGatcatcatagagtgtactt--acataaacTCAGATAGcctagcctactacacacctacgCTATACGGTATGTATGACCTATTCCTCTTAGGCTACAAAcatgtacagcatgtgactgctGAATACTAGACTGTGGGCAAtcgtaacacaatggtatttatgtatctaaacacagaaaaagggACAGTAAAGATACAATTGTTATTTATACACTCTTAGGAAACCACCGTAGGATTGAACTGCACTGACTGATGCGTTCAACTGTAT----------------------TGATGAATGATGCAGTTCATAGCT-AACTGAAACGTCTTTACGCGGTACATGACTGTACAGT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18656502 400 + 33263144 AATATagtcatgtgctgcttaatgccaggaacacatcctgtgaaatgtgttgttaggtgatttcatagttgtgagatcatcatagagtgtactt--acataaactcagatagcctagcctactacacacctaggctatacggtatgtatgacctattcctcttaggctacaaacatgtacagcatgtgactgctgaatactagactgtgagcaatcgtaacacaatggtatttatgtatctaaacacagaaaaagggacagtaaagatacaattgttatttatacactcttaggaaaccaccgtAGGATTGAACTGCATTGACTGATGTGTTCAACTGTAT----------------------TGATGAATGATGCAGTTCATAGCT-AACTGAAACGTCTTTATGCGGTACACGACTGTACAGT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198361943 396 + 210400635 AATATagtcatgtgctgcttaatgccaggaatacatcctgtgaaatgtg-tggtaggcgatttcatagttgtgagaacatcgtagagtgtacgtacacataaactcagatggcccagcctacgacacacctaggctatatggtatggatgacctattgctcttaggctacaaacatgtacagcatgtgactactgaat-----actgtgggcaatcataacacaatagtatttacgaatctaaacacag-aaaagggacagtcaaaaaacaattgttatttatacacccttatgggaccaccatAAGATTGAATCTCACTGACTGATGGGCTCAATTGCAT----------------------TGATGAACGATGTGGTTCATAGTTAAACTGAATTATCTTTAGGCGGTACATGACTGTACAGA i calJac3.chr1 C 0 C 0 e mm10.chr15 77187679 10369 + 104043685 I e canFam3.chr10 40974253 6 - 69331447 I a score=1505034.000000 s hg38.chr22_KI270876v1_alt 207840 474 + 263666 TTTCCAGAACCAAGAAGGAGAAAGGGGAGTTAGTGAAGTAAGACTACAACTCCTAAAATATA-TTTTTGTCGTTGTTGGGAAAAGGACCAGAGGAAATATATCTTGGGTGTTTAATCCTCCACCCTCCCTCTCCGTCTTGTCAATATGTGTGCTTTGACCACGCTGATTTTCTGCTCCTCCAAACGAACAATTTAAAATCTAC-----TAAGTATTTACTTACTTGGTTCCAAATTTAGTCCTTAATTTATATATTTTACAACAACAAAATTCCATATTCTGATTTGAAACATGACCAGAAAGAGATAGTTGTTTAACATTAAATGTCATATTAAAACAAATAGT--------------------AAAGGCGGCTTTCCTAAATAACTG-AAGCT-TGCCATATTTTAGCATTCATGCGTAAGCCTTTCCTATCTACTTA---AAATCTTTATTCTCATTGTCAAACCCTGACCTCAAGGCCCTTTTACCTCATACCTG-------------AACAAC s panTro4.chr22 34587394 476 + 49737984 TTTCCAGAACCAAGAAGGAGAAAGGGGAGTTAGTGAAGTAAGACTACAACTCCTAAAATATC-TTTTTGTCGTTGTTGGGAAAAGGACCAGAGGAAATATATCTTGGGTGTTTAATCCTCCACCCTCCCTCTCCCTCTTGTCAATATGTGTGCTTTGACCACGCTGATTTTCTACTCCTCCAAACGAACAATTTAAAATCTAC---AATAAGTATTTACTTACTTGGTTCCAAATTTAGTCCTTAATTTATATATTTTACAACAACAAAATTCCATATTCTGATTTGAAACATGACCAGAAAGAGATAGTTGTTTAACATTAAATGTCATATTAAAACAAATAGT--------------------AAAGGCGGCTTTCCTAAATAACTG-AAGCT-TGCCATATTTTAGCATTCATGCATAAGCCTTTCCTATCTACTTA---AAATCTTTATTCTCATTGTCAAACCCTGACCTCAAGGCCCTTTTACCTCATACCTG-------------AACAAC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31007386 475 + 46535552 TTTCCAGAACCAAGAAGGAG-AAGGGGAGTTAGTGAAGTAAGACTACAACTCCTAAAATATA-TTTTTGTTGTTGTTGGGAAAAGGACCAGAGGAAATATATCTTGGGTGTTTAATCCTCCACCCTCCTTCTCCCTCTTGTCAATATATGTGCTTTGACCACGCTGATTTTCTACTCCTCCAAACGAACAATTTAAAATCTAC---AATAAGTATTTACTTACTTGGTTCCAAATTTAGTCCTTAATTTATATATTTTACAACAACAAAATTCCATATTCTTATTTGAAACATGACCAAAAAGAGATAGTTGTTTAACATTAAATGTCATATTAAAACAAATAGT--------------------AAAGGCAGCTTTCCTAAATAACTG-AAGCT-TGCCATCTTTTAGCATTCATGCATAAGACTTTCCTCTCTACTTA---AAATCTTTATTCTCACTGTCAAACCCTGACCTCAAGGCCCTTTTACCTCATACCTG-------------AACAAC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100560982 475 - 115148730 TTTCCAGAACCAAGAAGGAGAAAGGGGAGTTAGTGAAGTAAGACTACAACTCCTAAAATATA-TTTTTGTTGTTGTTGGG-AAAGGACCAGAGGAAATATATCTTGAGTGTTTAATCCTCCACCCTCCCTCTCCCTCTTGTCAATATGCGTGCTTTGACCACGCTGATTTTCTACTCCTCCAAACGAACAATTTAAAATCTAC---AATGAGTATTTACTTACTTTGTTCCAAATTTACTCCTTAAGTTACACATTTTACAACAATAAAATTCCATATTCTGATTTGAAACATAACCAAAAAGAGATAGTTGTTTAACATTAAATGTGATATTAAAACAAACAGT--------------------AAAGGCAGCTTTCCTAAATAACTG-AAGCT-TGCCATCTTTTAGCATTCATGCATAAGACTTTCCTCTCTACTTA---AAATCTTTATTCTCACTGTCAAACCCTGACCTCAAGGCCCTTTTACCTCATACCTG-------------AACAAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80705284 460 + 95678458 TTTCTAGAACC---AAGGAGAAAGGAGAGTTAGTGAAGTAAGACTACAGCTCCTAAAATAGA-TTTTTGTTGTTGTTGGGAAAAGGACCAGAGGAAATGTATCTTGGGCATTTAATCCTCCACCCTCCCTTTCCCACTTGTCAATATGTGTGCTTTGATCACGCTGCTTTTCTACTCCTCCAAACGAACAATTTAAAATCTAC---AATGAGTATTTACTTACTTGGTTCCGAATTTAGTCCTTAATTTATACATTTTACAAC---AAAGTTCCATATTCTGGTTTGAAACATGACCAAAAAGAGATAGTT----------AAATGTCACATTAAAACAAATAGT--------------------AAAGGCAGCTTTCCTAAATAACCG-AAGCT-TACTATCTTTTAGCTTTCATGCATAAGACTTTCCTCTCTACTTA---AAATCTTTATTTTCACTGTCAAACCCTGACCTCAAGGGCCTTTTACCTCATACCTG-------------AACAAC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81131857 458 - 96509753 TTTCTAGAACC---AAGGAGAAAAGAGAGTTAGTGAAGTAAGACTACAGCTCCTAAAATAGA-TTTTTGTTGTTGTTGGGAAAAGGACCAGAGGAAATGTATCTTGGGCATTTAATCCTCCACCCTCCCTTTCCCACTTGTCAATATGTGTGCTTTGATCACGCTGCTTTTCTACTCCTCCAAACGAACAATTTAAAATCTAC---AATGAGTATTTACTTACTTGGTTCCGAATTTAGTCCTTAATTTATACATTTTACAAC---AAAGTTCCATATTCTGGTTTGAAACATGACCAAAAAGAGATAGTT------------GTTTAACATTAAAACAAATAGT--------------------AAAGGCAGCTTTCCTAAATAACCG-AAGCT-TACTATCTTTTAGCTTTCATGCATAAGACTTTCCTCTCTACTTA---AAATCTTTATTTTCACTGTCAAACCCTGACCTCAAGGCCCCTTTACCTCATACCTG-------------AACAAC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76387963 471 + 90941950 TTTCTAGAACC---AAGGAGAAAGGAGAGTTAGTGAAGTAAGACTACAGCTCCTaaaataga-tttttgttgttgttgggaaaAGGACCAGAGGAAATGTATCTTGGGCAGTTAATCCTCCACCCTCCCTTTCCCATTTGTCAATATGTGTGCTTTGACCACGCTGCTTTTCTACTCCTCCAAATGAACAATTTAAAATCTAC---AATGAGTATTTACTTACTTGGTTCCAAATTTAGTccttaatttatacattttacaaC---AAAGTTCCATATTCTGGTTTGAAACATGACCAAAAAGAGATAGTTGTTTAACATTAAATGTCACATTAAAACAAATAGT--------------------AAAGGCAGCTTTCCTAAATAACTG-AAGCTATACTATCTTTTAGCTTTCATGCATAAGACTTTCCTCTCtactta---aaatctttattttcactGTCAAACCCTGACCTCAAGGCCCTTTTACCTCATACCTG-------------AACAAC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18656902 470 + 33263144 TTTCTAGAACC---AAGGAGAAAGGAGAGTTAGTGAAGTAAGACTACAGCTCTTAAAATAGA-TTTTTGTTGTTGTTGGGAAAAGGACCAGAGGAAATGTATCTCGGGCATTTAATCCTCCACCCTCCCTTTCCCACTTGTCAATATGTGTGCTTTGACCACGCTGCTTTTCTACTCCTCCAAACAAACAACTGAAAATCTAC---AATGAGTATTTACTTACTTGGTTCCGAATTTAGTCCTTAATTTATACATTTTACAAC---AAAGTTCCATATTCTGGTTTGAAACATGACCAAAAAGAGATAGTTGTTTAACATTAAATGTCACATTAAAACAAATAGT--------------------AAAGGCAGCTTTCCTAAATAACTG-AAGCT-TACTATCTTTTAGCTTTCATGCATAAGACTTTCCTCTCTACTTA---AAATCTTTattttcactgtcaaaccctgacctcaaggcccttttacctcatacctg-------------aacaac i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198362339 474 + 210400635 TTTCCAAG------AAGGGGAAAGGGGAGTTAGTGGAGTAAG---ACAACTCCTAAAATATATTTTTTGTTGTTGTTGGGGAAAGAACCAGAGG--ATATATCTTGGGTGTTTAAT-------CCTCCCTCTCCCCCTTGTCAATATTTGTGCTTTGACCATGCTGATTTTCTACTTCTCCAAATGAACAATTTAAAATCTAC---AATGGATATTTACTTACTTGGTTCCAAA-TTAGTCCTTAATTTATACATTTTACAACAACAAAATTCCATATTCTGGTTTGAAACATGACCAAAAAGAGACAGCTGTTTAACATTAAATGTCCTATTAAAACAAATAGT--------------------AAATGCAGCTTTCCTAAATAACTG-AAGCT-TACCGTCTTCCATCACTCATGCCTAAGACTTTCCTCTCTAACTATGTAAAATTTTATCCTCACTGTCAAACCCTGACCTCGAGGCACTTGTACCTCGTACCTGAGTCTATATTATTAACAAT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40974259 478 - 69331447 TTTCCAGAACCAAAAAGGGAAAAAAGGAGCTAGTGAAGGAAGATTACAACTCTTAAAATGTA-CTTTATTCATTGC---AAAAGAAAACTAAGAAAATATGTCTTCAGAGTTGCAGGCTCTCCCCATTCCCTTCCTC--------ATGTGTGCTCTAACCACACCAAATCGCAAGCCCTCCCAACAGACAACTTAAAATCTAGGAAAATGCATATTTGCTTAATTGGTCCCAAACTTATTCCCTAATATATAAATTTAACAAC---AAAATTCCTTATTCTGTTTTGAAACATGAC----AAAAGACACTTGCTTAAGATTAAATGCCATATCAAAACAAAGAGTATTAAAGCACACATATTAAAACAGGCAGCTTTCTTACACAACTGCAAGCT-TCTTGTTT----GCATTCATGCATAATACTTTTATCCTTACTTA--AAAATTTTTATTCTCATTTCCAAACCCTGATCCCAAAGCCGTTTTA-CTCATACCTG-------------AATAAC i canFam3.chr10 I 6 I 5199 e mm10.chr15 77187679 10369 + 104043685 I a score=3925142.000000 s hg38.chr22_KI270876v1_alt 208314 1331 + 263666 T--------------ACAATGGTAACTGTTCTCTATGccttttctgatcccatctcctgcacttccttgccctcccacgccctggaggtcatgggctattctcagcaaactcctctacacactc-acctctcttctgtgatattctctttactcttttgatcttaaggaaaccagactgcccctgagattactgttgcttctacagtaaacacttttttcttactcatcacatacctcagcaggggcaagcatcggccttactccccattaccatatagtgttggaccttccagatatcctcttccttccttcccaatactgcttccaaaccacttctcttccctccaggcaaactgcacctgtcccctgct------------aaatagggctccctgatttcatctccattgttagtcttatcactctgataacttcaacagccacatagattcaacattttggccttctttttgaagtctttagcaccaactgtatttttccaccacctcacctaaagccattcacctagcatcatattctaatacaatcattacctacaaaaatttcaagtattc-tattatcacaccatcaagcgtttgcttacaatagtagtttgacccctgtggcaattct--ccagcctccttaagatctatagtttacaggctgat-gtaccactttttcactattactccttcttatgttctacctccctcctaagccagtttagatcctatggcctcatactacacagagtcctctccaaaaaatcttaatttccttgtcctcttttcccttagtctaactcatttggcagctccaactatgtacttattcctctcctgcatttaaataacagaagattgctggataaaactcacacaactgactcgccaccacatacatcaaatttatgatcacaaatcttaggcctacttcatctctgtagtaaatttactcccca-tttttttgagattactattttataccttgcttcactcctcaaatctgcaataTAGTagtcatgtatcacttaacaacaggaatgtgttctgagaaatgcatcactgagcaatctgattgtgtgagaacatcaaggttccgtgtgctta-caccaacctagatggtctagtctactacatacctaggctatacaatacagcccattgctctaggctaTtgtcttagtccatttaatgttgctataaaggaatacctgaggctgtgtaattgataaagaaaagaggtttatttggctcacagttctgcaggttgtgcaagaagtgtggcactggcacctgcatctggtgagggtctctggctgcttccttccactcatggcagaaagggaa--gaggg s panTro4.chr22 34587870 1331 + 49737984 T--------------ACAATGGTAACTGTTCTCTATGccttttctgatcccatctcctgcacttccttgccctcccacgccctggaggtcatgagctattctcagcaaactcctctacacactc-acctctcttctgtgatattctctttactcttttgatcttaaggaaaccagactgcccctgagattactgttgcttctacagtaaacacttttttcttactcatcacatacctcagcaggggcaagcatcggccttactccccattaccatatagtgttggaccttccagatatcctcttccttccttcccaatactgcttccaaaccacttctcttccctccaggcaaactgcacctatcccctgct------------aaatagggctccctgatttcatctccattgttggtcttatcactctgataacttcaacagccacatagattcaacattttggccttctttttgaagtctttagcaccaactgtatttttccaccacttcacctaaagccattcacctagcatcatattctaacacaatcattacctacaaaaatttcaagtattc-tattatcacaccatcaagcgtttgcttacgatagtagtttgacccctgtggcaattct--ccagcttccttaagatctatagtttacaggttgat-gtaccactttttcactattactccttcttatgttctacctccctcctaagccagtttagatcctatggcctcatactacacagagtcctctccaaaaaatcttaatttccttgtcctcttttcccttagtctaactcatttggcagctccaactatgtacttattcctctcctgcatttaaataacggaagatcgctggataaaactcacacaactgactcgccaccacatacatcaaatttatgatcacaaatcttaggcctacttcatctctgtagtaaatttactcccca-tttttttgagattactattttataccttgcttcactcctcaaatctgcaataTAGTagtcatgtatcacttaacaacaggaatgtgttctgagaaatgcatcactgagcaatttgattgtgtgagaacatcaaggttccatgtgctta-caccaacctagatggtctagtctactacatacctaggctatacaatacagcccattgctctaggctaTtgtcttagtccatttaatgttgctataaaggaatacctgaggctgtgtaattgataaagaaaagaggtttatttggctcacagttctgcaggttgtgcaagaagtgtggcactggcacctgcatctggtgagggtctctggctgcttccttccactcatggcagaaagggaa--gaggg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31007861 1323 + 46535552 T--------------ACAATGGTAACTGTTCTCTATGccttttctgatcccatctcccgcacttccttgccctcccacgccctggaggtcatgagctattctcagcaaactcctctacacactc-ccctctcttctgtgatattctctttactcttttgatcttaaggaaaccggactgcccctgagattactgttgcttctacagtaaacacttttctcttactcatcacatacctcagcaggggcaagcatccgccttactccccattaccatatagcgttggaccttccagatatcctcttccttccttcccagtactgcttccaaaccacttctcttccctccaggcaaactgcacctactgcctgct------------aaatagggctccctgatttcatctccactgttagtcttatcactctgataacttcaacagccacatagatacaacattttggccttttttttgaagtctttagcaccaactgtatttttccaccacttcacctaaagccattcacctagcatcatattctaatacaatcatcacctacaaaaatttcaagtattc-tattatcacaccatcaagcgtttgcttacaatagtagtttgacccctgtggcaattct--ccagcctccttaagatcgatagtttacaggttgatcgtaccactttttcactattactccttcttatgttctacctccctccaaagccagtttagatcctatggcctcatactatacagagtcctctccaaaaaatcttaatttccttgtcctcttttcccttagtctaactcatctggcagctccaactatgtacttatt-ctctcctgcatttaaagaacggaagatcgctggatgaaactcacacaactgactcgccaccacatacatcacatttatgatcacaaatcttaagcctacttcatctctgtagtacatttattccccattttttttgagattactattttataccttgcttcactcctcaaatctgcaataTAGTagtcatgtatcacttaataacaggaatgtgttctgagaaatgcatcactgagcaatttcattgtgtgagaacatcaaag-----tgtgctta-caccaacccagatggtctagtctactacatacctaggctatacaatacagcccattgctctaggctaTtgtcttagtccatttaatgttgctataaaggaatacctgaggctgtgtaattgataaagaaaagaggtttatttggctcacagttctgcaggttgtgcaagaagtgtggcactggcacctgcatctggtgagggtctctggctg----cttccactcatggcagcaagggaa--gaggg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100561457 1323 - 115148730 T--------------ACAACAGTAACTGTTCTCTATGccttttctgatcccatctcctgctcttccttgccttcccacgccctggaggtcatgagctattctcagcaaactcctctacacactc-ccctctcttctgtgatattctctttactcttttgatcttaaggaaaccggactgcccctgagattactgttgcttctacagtaaacacttttctcttactcatcacatacctcagcaggggcaagcatccgccttactccccattaccatatagtgttggaccttccaggtatcctcttccttccttcccaatactgcttccaaaccacttctcttccctccaggcaaactgcacctatcgtctgct------------aaatagggctccctaatttcatctccattgttagtcttatcactctgataacttcgacagccacaaagattcaacattttggccttctttttgaagtctttagcaccaactgtatttttccaccacttcacctaaagccattcacctagcatcatattctaatacaatcatcacctacaaaaatttcaagtattc-tattatcacacaatcacgcgtttgcttacaatagtagtttgacccctgtggcaattct--ccagcctccttaagatctatagtttacaggtggatcctaccactttttcactattactccttcttacgttctacttccctcctaagccagtttagatcctatggcctcatactatatagagtcctctccaaaaaatcttaatttccttgtcctcttttcccttagtctaactcatttggcagctccaactatgtacttattcctctcctgcatttaaataacagaagatcgctggataaaactcacacaactgactcgccaccacatacatcaaatttatgatcacaaatcttaagcctacttcatctctgtagtaaatttactcccca-tttttttgagattactgttttataccttgcttcactcctcaaatctgcaGTATAGTagtcatgtatcacttaacaacaggaatgtgttctgagaaatgcatcactgagcaatttcattgtgtgagaacatcaaag-----tgtgctta-cactaacctagatggtctagtctactacgtacctaggctatacaatacagcccattgctctaggctaTtgtcttagtccatttaatgttgctacaaaggaatacctgaggctgtgcaattgataaagaaaagagttttatttggctcacagttctgcaggttgtgcaagaagtgtggcactggcacctgcatctggtgagggtctctggctg----cttccactcatggcagaaagggaa--gaggg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80705744 1318 + 95678458 T--------------ACAATGGTAACTGTTCTCTATGccttctctgatcccacctcctgctctttcttgccctcccacgccctggaagtcatgagctattctcagtaaactcctctatatacttgacctctcttctgtgaaattctctttactc--ttgatctgaaggaaacctgactgcccctgagattactgttgcttctacggtaaacacttttctcttacccatcacatacctcagcaggggcaagcatccaccttactccccattaccatgcagttttggaccttccaggtatcctcttccttccttcccaatactgcttccaaactacttctcttcccttcaggcaaactgcacctatcacctgct------------aaatacagctccctgatttcatctccattgttactcttatcactctgataacttcagcagccacacagattcaacactttggccttcttgttgaaatctttagcaccaactgtatttttccaccattttacctaaagccattcacctagcatcatattctaacacaatcatcacctataaaaatttcaagtattc-tattatcacaccatcaagcatttgcttacaatagtagtttgacccctgtggcaattct--ccagcctccttaagatctctagtttacaggttgttcgtaccacttttccactattactccttctcatgttctacttccctcctaagccagtttagatcctatggccccatactatacagagtcttctccaaaaaatcttaatttccttgtcctcttttcccttactctaacttatttggtagctccaaccatgtacttacttctctcctgcatttaaataacagaagatcgctggataaaactcacacaactgactcgccaccacatacatcaaatttatgatcacaaatcttaagcctacttcatctctgtagtaaatttactcccca--ttttttgagattactattttataccttgcttcactcctcaaatctgcaatacAGTagtcatgtgtcactt---aacaggaatgtgttctgagaaatgcatcactgagcaatttcattgtgtgagaacatcaaag-----tgtgctta-caccaacctagatggtctagtctactacatacctaggctatacaatacagcccattgctctaggctaTtgtcttggtccatttaatgtcgctataaaggaatacctgaggctgtgtaatttataaagaaaagaggtttatttggctcacagttctgcaggttgtgcaagaagtgtggcactggcacctgcatctggtgaggttctctggctg----cctccactcatggcagaaagggaa--gcggg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81132315 1319 - 96509753 T--------------ACAATGGTAACTGTTCTCTATGccttctctgatcccacctcctgctctttcttgccctcccacgccctggaagtcatgagctattctcagtaaactcctctatatacttgacctctcttctgtgaaattctctttactc--ttgatctgaaggaaacctgactgcccctgagattactgttgcttctatggtaaacacttttctcttacccatcacatacctcagcaggggcaagcatccaccttactccccattaccatgcagttttggaccttccaggtatcctcttccttccttcccaatacTGCTTCCAAACTACTTCTCTTCCCTTCAGGCAAACTGCACCTATCACCTGCT------------AAATACAgctccctgatttcatctccattgttactcttatcactctgataacttcagcagccacacagattcaacactttggccttcttgttgaaatctttagcaccaactgtatttttccaccattttacctaaagccattcacctagcatcatattctaacacaatcatcacctataaaaatttcaagtattc-tattatcacaccatcaagcatttgcttacaatagtagtttgacccctgtggcaattct--ccagcctccttaagatctctagtttacaggttgatcgtaccactttttcactattactccttctcatgttctacttccctcctaagccagtttagatcctatggccccatactatacagagtcttctccaaaaaatcttaatttccttgtcctcttttcccttactctaacttatttggtagctccaaccatgtacttacttctctcctgcatttaaataacagaagatcgctggataaaactcacacaactgactcgccaccacatacatcaaatttatgatcacaaatcttaagcctacttcatctctgtagtaaatttactcccca--ttttttgagattactattttataccttgcttcactcctcaaatctgcaatacAGTagtcatgcgtcactt---aacaggaatgtgttctgagaaatgcatcactgagcaatttcattgtgtgagaacatcaaag-----tgtgctta-caccaacctagatggtctagtctactacatgcctaggctatacaatacagcccattgctctaggctaTtgtcttggtccatttaatgtcgctataaaggaatacctgaggctgtgtaatttataaagaaaagaggtttatttggctcacagttctgcaggttgtgcaagaagtgtggcactggcacctgcatctggtgaggttctctggctg----cctccactcatggcagaaagggaa-gggggg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76388434 1283 + 90941950 T--------------ACAATGGTAACTGTTCTCTATGCCTTCTCTGATCCCATCTCCTGCTCTTCCTTGCCCTCCCACGCCCTAGAAGTCATGAGCTATTCTCAGTAAACTCCTCTATATACTTGACCTCTCTTCTGTGAAATTCTCTTTACTC--TTAATCTTAAGGAAACCTGACTGCCCCTGAGATTACTGTTGCTTCTAC--------------------------------------GGGGCAAGCATCTACCTTACTCCCCATTACCACACAGTTTTGGACCTTCCAGGtaccctcttccttccttcccaatACTGCTTCCAAACTACTTCTTTTCCCTTCAGGCAAACTGCACCTATCACCTGCT------------AAATATGGCTCCCTGATTTCATCTCCATTGTTACTCTTATCACTCTGATAACTTCAGCAGCCACACAGATTCAACACTTTGGCCTTCTTGTTGAAATCTTTAGCACCAACTGTATTTTTCCACCACTTTACCTAAAGCCATTCACCTAGCATCATATTCTAACACAATCATCACCTATAAAAATTTCAAGTATTC-TATTATCACACCATCAAGCATTTGCTTACAATAGTAGTTTGACCCCTGTGgcaattct--ccagcctccttAAGATCTCTAGTTTACAGGTTGATCGTACCACTTTTTCACTATTACTCCTTCTCATGTTCTACTTCCCTCCTAAGCCAGTTTAGATCCTATGGCCCCATACTATACAGAGTCTTCTCCAAAAAATCTTAATTTCCTTGTCCTCTTTTCCCTTACTCTAACTTATTTGGTAGCTCCAACCATGTACTTACTTCTCTCCTGCATTTAAATAACAGAAGATCGCTGGATAAAACTCACACAACTGACTCGCCACCACATACATCAAATTTATGATCACAAATCTTAAGCCTACTTCATCTCTGTAGTAAATTTACTCCCCA-tttttttGAGATTACTATTTTATACCTTGCTTCACTCCTCAAATCTGCAATACAGTAGTTATGTGTCACTT---AACAGgaatgtgttctgagaaatgcatcactgAGCAATTTCATTGTGTGAGAACATCAAAG-----CGTGCTTA-CACCAACCTAGATGGtctagcctactacatacctaggctatacAATACAGCCCATTGCTCTAGGTTATCGTCTTGGTCCATTTAATGtcgctataaaggaatacctgaggctgtgtaatttataaagaaaagaggtttatttggctcacagttctgcaggttctGCAAGAAGTGTGGCACTGGCACCTGCATCTGGTGAGGTTCTCTGGCTG----Cctccagtcatggcagaaagggaaggggggg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18657372 1315 + 33263144 t--------------acaatggtaactgttctctatgccttctctgatcccatctcctgctcttccttgccctcccacgccctggaagtcatgagctattctcagtaaactcctctatatacttgacctctcttctgtgaaattctctttactc--ttgatcttaaggaaacctgactgcccctgagattactgttgcttctacggtaaacacttttctcttacccatcacatacctcagc-agggcaagcatccaccttactccccattacgatgcagtgttggaccttccaggtatcct----cttccttcccaatacTGCTTCCAAACTACTTCTCTTCCCTCCAGGCAAACTGCACCTATCACCTGCT------------AAATACggctccctgatttcatctccactgttactcttatcactctgataacttcagcagccacacagattcaacactttggccttcttgttgaaatctttagcaccaactgtatttttccaccactttacctaaagccattcacctagcatcatatgctaacacaatcatcacctataaaaatttcaagtattc-tattatcacaccatcaagcatttgcttacaatagtagtttgacccctgtggcaattct--ccagcctccttaagatctctagtttacaggttgatcgtaccactttttcactattgctccttctcatgttccatttccctcctaagccagtttagatcctatggccccatactacacagagtcttttccaaaaaatcttaatgtccttgtcctcttttcccttactctaacttatttggtagctccaaccatgtacttacttctctcctgcatttaagtaacacaagatcgctggataaaactcacacaactgacttgccacgacatacatcaaatttatgatcacaaatcttaagcctacttcatctctgtagtaaatttactcccca-tttttttgagattactattttataccttgcttcactcctcaaatctgcaataTAGTagtcatgtgtcactt---aacaggaatgtgttctgagaaatgcatcactgagcaatttcatcgtgcgagaacatcaaag-----tgtgctta-caccaacctagatggtctagtctactacatacctaggctatacaatacagcccattgctctgggttaTtgtcttggtccatttaatgtcgctataaacgaatacctgaggctgtgtaatttataaagaaaagaggtttatttggctcacagttctgcaggttgtgcaagaagtgtggcactggcacctgcatctgatgaggttctctggctg----cctccactcatggcagaaagggaa-gagggg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198362813 1336 + 210400635 GAATCCATTGTATTAACAATAGTGACTGTTCTCTATGctttttctgatcccatctcctgctcttccttgccctcccatgccctggaagtcatgagcttttctcagcaaactcctctaaatactcgccctctctcgtgtgatagtctctttactcttttgctcttaaggaaacctgactgcccccgagaataatgctgcacttaaggtaaaagcttttctcttattcatcacatacctcagcaggagcaagcatctgccttgctccccattatcatatagtattgaacctttcaggtatcctcttccttccttcccaatactgcttccaaatcacttctgttccctccaggcaaactgcacctgtcacctgctgacctcctcttagaatagggctccctgatttcatttccattgttagtcttatcactctgataactttgacagccacaaagattcaacattttggcctt-tatttgaagtcttcagcaccaactatatttttctaccacttcacct-aagccattcacctagcatcatattctaacacaatcatcacctacaaaaatgtttagtattcttattattataccaccaagcgtttgcttacaatggtagtttgacctctgtggcaattctcaccagcctccttaagatctccagtttccaagctgatcttaccactttttcacttttattccttctcatgttctactgcccttctaagccggtttagatcctatggccccatacaatacagagtc-tctccaaaaaatcttcatttccttgctctcttttcccttagtctaacatatttggtaactccaactatgtacttattcctctcctgcatctaaa-aacagaagactgctgaataaaaatcacacaactgacttgccaccagat--gtcaaatttatg-------atcttaagcctgcttcatctctgtagtaaatgtattctc---attttttgagattactagttcataccttgcttgactcctcaaatctacaataTAGTagtcatgtgtcactt---aacaggaatatgttctgagaaatgcatcactgagcaatttcactgtgtgagaacatcaaag-----tgtgcttaccacaaacctagagagtctagtctactacatacctggtctatgcaatatagcccattgctttaggataTtgtcttagtccatttaatgttgctataaaggaatacctgaggctgtgtaatttataaagaaaagaggtttatttagctcacagttctgcaggttgtgcaagaagtgtgacactggcacctgcatctggtgagggcttctggctg----cttccactcaaggcagaaagggaa--ggggg i calJac3.chr1 C 0 I 2436 e mm10.chr15 77187679 10369 + 104043685 I e canFam3.chr10 40974737 5199 - 69331447 I a score=78844.000000 s hg38.chr22_KI270876v1_alt 209645 32 + 263666 gttgaagtcagcaatgacctccatattgctaa s panTro4.chr22 34589201 32 + 49737984 gttgaagtcaccaatgacctccatattgctaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31009184 32 + 46535552 gctgaagtcatcaatgacctccatattgctaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100562780 32 - 115148730 gctgaagtccccagtgacctccatattgctaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80707062 32 + 95678458 gctgaagtcaccaatgacctccatattgctaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81133634 32 - 96509753 GCTGaagtcaccaatgacctccatattgctaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76389717 32 + 90941950 gCTGAAGTCACCAATGACCTCCATATTGCTAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18658687 32 + 33263144 GCTGaagtcaccaatgacctccatattgctaa i chlSab2.chr19 C 0 C 0 e mm10.chr15 77187679 10369 + 104043685 I e canFam3.chr10 40974737 5199 - 69331447 I e calJac3.chr1 198364149 2436 + 210400635 I a score=27592.000000 s hg38.chr22_KI270876v1_alt 209677 9 + 263666 aCtcaggct s panTro4.chr22 34589233 9 + 49737984 aCtcaggct i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31009216 9 + 46535552 aCtcaggct i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100562812 9 - 115148730 aCtcaggct i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80707094 9 + 95678458 aCtcaggct i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81133666 9 - 96509753 aCtcaggct i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76389749 9 + 90941950 ACTCAGGCT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18658719 9 + 33263144 actcaggct i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40979936 9 - 69331447 ACTCTGCCT i canFam3.chr10 I 5199 C 0 e mm10.chr15 77187679 10369 + 104043685 I e calJac3.chr1 198364149 2436 + 210400635 I a score=580596.000000 s hg38.chr22_KI270876v1_alt 209686 177 + 263666 tctgccctcatcattccaccaaaataacccttgctaaagtcaccaatgacttccatattgctaaatccaaggacagt---tttcagtGTCT-----TGCCACAATCTCTTATCTTGA-TTTCCTAATGTCCTGGTTTTCCTCCTTAAGAATAAGGTCTTTAAAACCTAGTTCCCTGCTTCCTTTGA s panTro4.chr22 34589242 177 + 49737984 tctgccctcatcattccaccaaaataacccttgctaaagtcaccaatgacttccatattgctaaatccaaggacagt---tttcagtGTCT-----TGCCACAATCTCTTATCTTGA-TTTCCTAATGTCCTGGTTTTCCTCCTTAAGAATAAGGTCTTTAAAACCTAGTTCCCTGCTTCCTTTGA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31009225 177 + 46535552 tctgccctcatcattccaccaaaataacccttgctaaagtcaccaatgacttccatattgctaaatccaaggacagt---tttcagtGTCT-----TGACACAATCTCTTATCTTGA-TTTCCTAATGTCCTGGTTCTCCTCCTTAAGAATAAGGTCTCTAAAACCTAGTTCCCTGCTTCCTTTGA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100562821 177 - 115148730 tctgccctcatcattccaccaaaataacccttgctgaagtcaccaatgacttccatattgctaaacccaaggacagt---tttcagtGTCT-----TGCCACAATCTCTTATCTTGA-TTTCCTAATGTCCTGGTATTCCTCCTTAAGAATAAGGTCCCTAAAACCTAGTTCCCTGCTTCCTTCGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80707103 177 + 95678458 tctgccctcatcgttccaccaaaataacctttgctaaagtcaccaatgacctccatattgctaaacccaaggacggt---tttcagtgcct-----TGCCGTAATCTCTTATCTTGA-TTTCCTAATGTCCTGGTTTTCCTCCTTAAGAATAAGGTCTCCAAAACCTAGTTCCTTGCTTCCTCTGA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81133675 177 - 96509753 tctgccctcatcgttccaccaaaataacctttgctaaagtcaccaatgacctcCATATTGCTAAACCCAAGGACGGT---TTTCAGTGCCT-----TGCCGTAATCTCTTATCTTGA-TTTCCTAATGTCCTGGTTTTCCTCCTTAAGAATAAGGTCTCCAAAACCTAGTTCCTTGCTTCCTTTGA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76389758 177 + 90941950 TCTGCCCTCATCGTTCCACCAAAATAACCTTTGCTAAAGTCACCAATGACCTCCATATTGCTAAACCCAAGGACGGT---TTTCAGTGTCT-----TGCCGTAATCTCTTATCTTGA-TTTCCTAATGTCCTGGTTTTCCTCCTTAAGAATAAGGTCTCCAAAACCTAGTTCCTTGCTTCCTTTga i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18658728 172 + 33263144 tctgccctcatcgttccaccaaaataacctttgctaaagtcaccaatgacctccacattgctaaacccaaggacggt---tttcagtGTCT-----TGCCGTAATC-----TCTTGA-TTTCCTAATGTCCTGGTTTTCCTCCTTAAGAATGAGGTCTCCAAAACCTAGTTCCTTGCTTCCTTTGA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198366585 176 + 210400635 tctgccctcatcattccaccaaaataatccttgttaaagtcaccaatgacctccatattgctaaacccaaggacatt---tttca-TTTTT-----TGCCACAATCTCTTATCTTGA-TTTCCTAAGGTCCTGGTTTTCCTCCTTAAGAATAAGGTCTCTAAAACCTAGTTTCCTGCTTCCTTTGA i calJac3.chr1 I 2436 C 0 s canFam3.chr10 40979945 161 - 69331447 GCTGTCTCCACCTCTTTAACAGGAGAATTCTT--------------TGAATTCCTAGATGCT---------GCCAGTGTATTTCATTCTCTCTTCCTGCCAC--TCTTTTACCTTGATTTTCCTAGCATGCTGGTTTTTCTCCTAAAGAACCAGCTCTCCAGAACCTTGTTCCCTATTTCCCTTGA i canFam3.chr10 C 0 I 25 e mm10.chr15 77187679 10369 + 104043685 I a score=826465.000000 s hg38.chr22_KI270876v1_alt 209863 294 + 263666 AAATCTTggccgggcacactgactaagtcctgtaatcccagcactctgggaggccaaggtgggcagatctcttcaggtcaggagttcaagaccagcctggccaacatggtgaaactc----catatctattaaaaatacaaaaatta-------gctcggcgtggtgt-gggtgcctgtaatcccagctacctgggaggcttgaggcaggagaatcgcttgaatgcaggaggcgaagggtgcagtgagccaagatcatgccactgtgctccagggtgggtgacaaagcaagactccatctcaaaaa s panTro4.chr22 34589419 294 + 49737984 AAATCTTggccgggcacactgactaaggcctgtaaacccagcactctgggaggccaaggtgggcagatctcttcaggtcaggagttcaagaccagcctggccaacatggtgaaaccc----catctctattaaaaatacaaaaatta-------gctgggcatggtgt-gggtgcctgtaatcccagctacctgggaggcttgaggcaggagaatcgcttgaatccaggaggcaaagggtgcagtgagccaagatcatgccactgtgccccagggtgggtgacaaagcaagactccatctcaaaaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31009402 293 + 46535552 AAATCTTggccaggcacactgactaaggcctgtaatcccagcactctgggaggccaaggtcggcagatctcttcaggtcaggagttcaagaccagcctggccaacatggtgaaacct----catctctattaaaaatacaaaaatta-------cccaggcgtagtgt-gggtacctgtaatcccagctacttgggaggc-tgaggcaggagaattgcttgaatccaggaggcaaaggttgcagtgagccaagatcatgccactgtgctccagggtgggtgacagagcaagactccgtctcaaaaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100562998 293 - 115148730 AAATCTTggccaggcacactgactaaggcctgtaatcccagcactctgggaggccaaggcaggcagatctcttcaggtcaggagttcaagaccagccgggccaacatggtgaaaccc----catttctattaaaaatacaaaaatta-------gctgggcgtggtat-gggtgcctgtaatcccagctacttgggaggc-tgaggcaggagaatcacttgaatccaggaggcgaaggttgcagtgagccaagatcatgccactgtgctccaagatgggtgatagagcaagactccatctcaaaaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80707280 292 + 95678458 AAATCTTggccaggcacactgactaaggcctgtaatcccagcattctgggaggccgaggcgggcagatctctacaagtcgggagttcaagaccagcctggccaacatggtgaaactc----cgtctccataaaaactacaaaaatta-------gccaggcatggtga-gggtgcctataatcccagctgttt-gaaggc-tgaggcaggagaatcgcttgaatccaggatgcaaagggtgcagtgagccaaggtcatgccactgtgctccaggttgggtaaaagagcaagactccgtctcaaaaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81133852 292 - 96509753 AAATCTTggccaggcacactgactaaggcctgtaatcccagcattctgggaggccgaggcgggcagatctctacaagtcgggagttcaagaccagcctggccaacatggtgaaactc----cgtctccataaaaactacaaaaatta-------gccaggcatggtga-gggtgcctataatcccagctgttt-gaaggc-tgaggcaggagaatcgcttgaatccaggatgcgaagggtgcagtgagccaaggtcatgccactgtgctccaggttgggtaaaagagcaagactccgtctcaaaaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76389935 292 + 90941950 aaatcttggccaggcacactgactaaggcctgtaatcccagcattctgggaggccgaggcaggcagatctctacaagtcgggagttcaagaccagcctggccaacgtggtgaaaccc----cgtctccattaaaactacaaaaatta-------gccaggcatggtga-gggtgcctataatcccagctgttt-gaaggc-tgaggcaggagaattgcttgaatccaggaggcaaagggtgcagtgagccaaggtcatgccactgtgctccaggttgggtaaaagagcaagactccgtctcaaaaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18658900 292 + 33263144 AAATCTTggccaggcacactgactaaggcctgtaatcccagcattccgggaggccgaggcgggcagatctctacaagtcgggagttcaagaccagcctggccaacatggtgaaaccc----cgtctccattaaaactacaaaaatta-------gccaggcatggtga-gggtgcctataatcccagctgttt-gaaggc-tgaggcaggagaatcgcttgaatccaggaggcgaagggtgcagtgagccaaggtcatgccactgtgctccaggttgggtaaaagagcaagactccatctcaaaaa i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198366761 303 + 210400635 AAATTTTggctggacacagtggctaaggcctgtaatcccagcactttgagaggccaatgagggcagatctcttcaggtcaggaattcaagaccagcctggccaacatggtgaaaccccccgcatctctattaaaaatataaaacttaggcataggcaggtcatggtgacaggcacctgtaatcccagctactcaggagac-tgaggcaggagaatcgcttgaacccgggaggcaaaggttgcagtgagccaagataatgccactgtactgcagcctacgcaacagagcaagact--gtctcaagaa i calJac3.chr1 C 0 M 81 e mm10.chr15 77187679 10369 + 104043685 I e canFam3.chr10 40980106 25 - 69331447 I a score=34216.000000 s hg38.chr22_KI270876v1_alt 210157 24 + 263666 g------------------------------gaaaagaaaagaaaagaaaaTTC s panTro4.chr22 34589713 24 + 49737984 g------------------------------gaaaagaaaagaaaagaaaaTTC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31009695 54 + 46535552 ggaaaagaaaagaaaagagaagagaagagaagaaaagaaaagaaaagaaaaTTC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100563291 19 - 115148730 g-----------------------------------gaaaataaaagaaaaTTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80707572 19 + 95678458 g-----------------------------------gaaaagaaaagaaaaTTC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81134144 19 - 96509753 g-----------------------------------gaaaagaaaagaaaaTTC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76390227 19 + 90941950 g-----------------------------------gaaaagaaaagaaaattc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18659192 19 + 33263144 g-----------------------------------gaaaagaaaagaaaaTTC i chlSab2.chr19 C 0 C 0 e mm10.chr15 77187679 10369 + 104043685 I e canFam3.chr10 40980106 25 - 69331447 I e calJac3.chr1 198367064 81 + 210400635 M a score=42112.000000 s hg38.chr22_KI270876v1_alt 210181 15 + 263666 ATTCTTCTCCA---GGCA s panTro4.chr22 34589737 15 + 49737984 ATTCTTCTCCA---GGCA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31009749 15 + 46535552 ATTCTTCTCCA---GGCA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100563310 15 - 115148730 ATTCTTCTCCA---GGCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80707591 15 + 95678458 ATTCTTCTCCA---GGCA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81134163 15 - 96509753 ATTCTTCTCCA---GGCA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76390246 15 + 90941950 attcttCTCCA---GGCA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18659211 15 + 33263144 ATTCTTCTCCA---GGCA i chlSab2.chr19 C 0 C 0 s mm10.chr15 77198048 18 + 104043685 ATTCCACTCCAACGGGAG i mm10.chr15 I 10369 C 0 e canFam3.chr10 40980106 25 - 69331447 I e calJac3.chr1 198367064 81 + 210400635 M a score=250532.000000 s hg38.chr22_KI270876v1_alt 210196 88 + 263666 TTAACTTCTCTTCTTGCTCTACATTCCTCCC-------TAGACCGTTATCATTTTAAGCC-----ATTATGAGACCCGCTCGGGGCATGCAGGTTTCTCA s panTro4.chr22 34589752 88 + 49737984 TTAACTTCTCTTCTTGCTCTACATTCCTCCC-------TAGACCGTTATCATTTTAAGCC-----ATTATGAGACCCGCTCGGGGCATGCAGGTTTCTCA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31009764 88 + 46535552 TTAACTCCTCTTCTTGCTCTACATTCCTCCC-------TAGACCGTTATCATTTTAAGCC-----ATTATGAGACCCACTCGGGGCATGCAGGTTTCTCA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100563325 88 - 115148730 TTAACTTTTCTTCTTGCTCTACATTCCTCCC-------TAGACCGTTATCATTTTAAGCC-----ATTATAAGGCCTGCTCAGGGTATACAGGTTTCTCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80707606 88 + 95678458 TTAACTTCTCTTCTTGCTCTACATTCCTCCC-------TAGACCATTATCATTTTAAGCC-----ATTATGAGACCCGCTTGGGGCATGCAGACTTCTCA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81134178 88 - 96509753 TTAACTTCTCTTCTTGCTCTACATTCCTCCC-------TAGACCATTATCATTTTAAGCC-----ATTATGAGACCCGCTTGGGGCATGCAGACTTCTCA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76390261 88 + 90941950 ttaacttctcttcttgctctaCGTTCCTCCC-------TAGACCACTATCATTTTAAGCC-----ATTATGAGACCCGCTTGGGGCATGCAGATTTCTCA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18659226 88 + 33263144 TTATCTTCTCTTCTTGCTCTACGTTCCTCCC-------TAGACCATTATCATTTTAAGCC-----ATTATGAGACCCGCTTGGGGCATGCAGATTTCTCA i chlSab2.chr19 C 0 C 0 s mm10.chr15 77198066 85 + 104043685 TTAAGGTCCTTTCTTGCCTGCAATTTCTCTT-------CAGGCCATT-TAATTTTAAGCATGTAGGTTGTATGACATTTT------ATGCA-ATTTCTCA i mm10.chr15 C 0 C 0 s canFam3.chr10 40980131 85 - 69331447 TTAActtctcttcttgctat---tttctgccatttttttaggctattctcatcttaagac-----actatcatgcctgc-------atgcagatttctcg i canFam3.chr10 I 25 C 0 e calJac3.chr1 198367064 81 + 210400635 M a score=631759.000000 s hg38.chr22_KI270876v1_alt 210284 165 + 263666 CAA---TAGAG-GAAAGCCTCTGTCTTTCCTTCTGTTTCCAGACCTAGG----TGGCC----ATGTAAGCAATATTTCCTCT-TGAACATCTCAAAGTTACCC--------------AAGTACTAAATCCAAAACCAAACCCATGATCCCTTTCATCTTCCCTCCTACAAAAA--CCTGGTCCTCTTCTAAATT s panTro4.chr22 34589840 165 + 49737984 CAA---TAGAG-GAAAGCCTCTGTCTTTCCTTCTGTTTCCAGACCTAGG----TGGCC----ATGTAAGCAATATTTCCTCT-TGAACATCTCAAAGTTACCC--------------AAGTACTAAATCCAAAACCAAACCCATGATCCCTTTCATCTTCCCTCCTACAAAAA--CCTGGTCCTCTTCTAAATT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31009852 165 + 46535552 CAA---TAGAG-GAAAGCCTCTATCTTTCCTTCTGTTTCCAGACCTAGG----TGGCC----ATGTAAGCAATATTTCCTCT-TGAACATCTCAAAGTTACCC--------------AAGTACTAAATCCAAAACCAAACCCATGATCCCTTTCATCTTCCCTCCTACAAAAA--TCTTGTCCTCTTCTAAATT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100563413 165 - 115148730 CAA---TAGAG-GAAAGCCTCTATCTTTCCTTCTGTTTCCAGACCTAGG----TGGCC----ATGTAAGCAATATTTCCTCT-TGAATATCTCAAAGTTACCT--------------AAGTACTAAATCCAAAACCAAACCCATGATCCCTTTCATCTTCCCTCCCACAAAAA--CCTGGTCCTCTTCTAAATT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80707694 165 + 95678458 CAA---TAGAG-GAAAGCCTCTATCTTTCCTTCTGTTTCCAGACTTAGG----TGGCC----ATGTAAGCAATATTTCCTCT-TGAACATCTCAAAGTTACCC--------------AAGTACTAAATCCAAAACCAAACCCATGATCCCTTTCATCTTCTCTCCTACAAAAA--CCTGGTCCTCTTCTGAATT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81134266 165 - 96509753 CAA---TAGAG-GAAAGCCTCTATCTTTCCTTCTGTTTCCAGACTTAGG----TGGCC----ATGTAAGCAATATTTCCTCT-TGAACATCTCAAAGTTACCC--------------AAGTACTAAATCCAAAACCAAACCCATGATCCCTTTCATCTTCTCTCCTACAAAAA--CCTGGTCCTCTTCTGAATT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76390349 165 + 90941950 CAA---TAAAG-GAAAGCCTCtatctttccttctgtttccagACTTAGG----TGGCC----ATGTAAGCAATATTTCCTCT-TGAACATCTCAAAGTTACCC--------------AAGTACTAAATCCAAAACCAAACCCACGATCCCTTTCATCTTCTCTCCTACAAAAA--CCTGGTCCTTTTCTAAATT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18659314 165 + 33263144 CAA---TAAAG-GAAAGCCTCTATCTTTCCTTCTGTTTCCAGACTTACG----TGGCC----ATGTAAGCAATATTTCCTCT-TGAACATCTCAAAGTTACCC--------------AAGTACTAAATCCAAAACCAAACCCATGATCCCTTTCATCTTCTCTCCTACAAAAA--CCTGGTCCTCTTCTAAATT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198367145 168 + 210400635 CAA---TAGAG-GAAAGCCTCTACCTTTCCTTATATTTCCAGACCTAGG----TGGTC----ATGTAAACAATATTTCCTCT-GGAACATCTCAAAGTTACCC-------------AAAGTACCAAATCTAAAACCAAACCCATGATCCCTTTCATCTTCCCTCCTACAAAAAACCCTGGTCCTCTTCCAAATT i calJac3.chr1 M 81 C 0 s mm10.chr15 77198151 179 + 104043685 -------CAAA-TTAAACCTCTATCTTTCCATAT-TTCCTGGACCTGGGTAGATAGCT----ATTTACACAGTATTCCCTCTCTGAACATCTCAAAGTTACTCCAAAATATCAAAAAAAAAATCAAATCCAAAATCCTATCTATGATCCCCTTCACCTTCCCTCCTACAGAAA--CCTGTCACTCACCCACATC i mm10.chr15 C 0 C 0 s canFam3.chr10 40980216 169 - 69331447 caaatttatagcttacacctggattttcccttgtatttccagacctagg----tagccaactagctaagctgaatttccccc-tg-----cacaaagttaccc------------caaaatactaaatcc-aaatcaaacccatg-tccctttctgcttccctccttcaaaaa-ccctggtcctctcccaactc i canFam3.chr10 C 0 I 331 a score=9096.000000 s hg38.chr22_KI270876v1_alt 210449 4 + 263666 AT---AA s panTro4.chr22 34590005 4 + 49737984 AT---AA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31010017 4 + 46535552 AT---AA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100563578 4 - 115148730 AT---AA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80707859 4 + 95678458 AC---AA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81134431 4 - 96509753 AC---AA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76390514 4 + 90941950 AC---AA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18659479 4 + 33263144 AC---AA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198367313 4 + 210400635 AT---AA i calJac3.chr1 C 0 C 0 s mm10.chr15 77198330 7 + 104043685 ATGGCAA i mm10.chr15 C 0 C 0 e canFam3.chr10 40980385 331 - 69331447 I a score=2152839.000000 s hg38.chr22_KI270876v1_alt 210453 643 + 263666 CATCCTGTCAATTTTACCTTCTGAATCTCTCAATACAGTTCCGCTTCCCTCCAGCCCATTCTATCATGACC-TTCCCTGTCACTCAGACTCTTACACAACAATC-ACCTAACTTCTCTCTGCACTTTTACTCTCCTC-TAATCTATGTAGGTATCTTT-TTAAA----AAATCTA-----ATTATAAACTTCACTTCACCCTACTCCCAATCCTACTTAGAATCTTTTAATGGCTTTTCACTGTCAAGTACGGTACCTATCACGGCAT----------------------------CTGACCTTAAATGTTATCTGAACTGAGCCATTGTCTACATTTTGTGATAATTCAATTTACTATTAAGTCTAGTTCTCTAATTGTGTAGAGCAATTAGAGTGGCAAAATAGTGA-TAAAA----AGCACTAAATGACTAACGTGAA------------ACCTG----AATAAGGTG------TT---------------------GTTATTAGCT---------------TATTTTTGCCTCACACAAAAGAACTTC----------CA-G-AAACTTTCACAG--ATTATCTCTATAATCTCTTGGTcccattttaaagattaggaaa---c--atgctcagaaagatgatacactgacaaatggcacaaccaagacccgaaactgtatcttttgactcacagt--------------ctgtgactttcaagttttatgataAAGCCATCAGTTACTTGCTACTTCATTTCTAAAATGACTGAT s panTro4.chr22 34590009 644 + 49737984 CATCCTGTCAATTTTACCTTCTGAATCTCTCAATACAGTTCCGCTTCCCTCCAGCCCATTCTATCATGACC-TTCCCTGTCACTCAGACTCTTACACAACAATCCACCTAACTTCTCTCTGCACTTTTACTCTCCTC-TAATCTATGTAGGTATCTTT-TTAAA----AAATCTA-----ATTATAAACTTCACTTCACCCTACTCCCAATCCTACTTAGAATCTTTTAATGGCTTTTCACTGTCAAGTACGGTACCTATCACGGCAT----------------------------CTGACCTTAAATGTTATCTGAACTGAGCCACTGTCTACATTTTGTGATAATTCAATTTACTATTAAGTCTAGTTCTCTAATTGTGTAGAGCAATTAGAGTGGCAAAATAGTGA-TAAAA----AGCACTAAATGACTAACGTGAA------------ACCTG----AATAAGGTG------TT---------------------GTTATTAGCT---------------TATTTTTGCCTCACACAAAagaacttc----------ca-g-aaactttaacag--attatctcaataatctcttggtcccattttaaagattaggaaa---c--atgctcagaaagatgatacactgacaaatggcacaaccaagacccgaaactgtatcttttgactcacagt--------------ctgtgactttcaagttttatgataAAGCCATCAGTTACTTGCTACTTCATTTCTAAAATGACTGAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31010021 651 + 46535552 CATCCTGTCAATTTTCCCTTCTGAATCTCTCAATACAGTGCCGCTTCCCTCTAGCCCATCCTATCGTGACC-TTCCCTGTCACTCAGACTCTTACACAACCATC-ACCTAACTTCTCTCTGCACTTTTACTCTCCTCTTAATCTATGTAGGTATCTTT-CTAAAAAACAAATCTA-----ATTATAAACTTCACTTCACCCTACTCCCAATCCTACTTAGAATCTTTTAATGGCTTTTCACTGTCAAGTACCGTACCTATCACGGCAT----------------------------CTGATCTTACATGTTATCTGAACTGAGCCATTGTCCACATTTTGTGATAATTCAATTTACTATTAAGTCTAGTTCTCTAACTGTGTAGAGCAATTAGAGTGGCAAAATAGCGA-TAAAA----AGCACTAAATGACTAACGTGAA------------ACCTG-AATAATAAGGTG------TT---------------------GTTATTAGCT---------------TATTTTTCCCTCACACAAAagaacttc----------ca-g-aaactttcacag--attatctcaataatctcttggtcccattttaaagattaggaaa---c--atgttcagaaagacgatacaccgaaaaatggcacaaccaagacccaaaactgtatcttttgactcacagt--------------ctgtgactttcAAGTTTTATGATAAAGCCATCAGTTACTCACTACTTCATTTCTAAAATGACTGAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100563582 650 - 115148730 CATCCCGTCAATTTTCCCTTCTGAATCTCTCAATACAGTTCCGCTTCCCTCTAGCCCATTCTATCATGACC-TTCCGTATCACTCAGACTCTTACACAACAATC-ACCTAACTTCTCTCTGTACTTTTACTCTCCTC-TAATCTATGTAGGTATCTTT-TTAAAAAACAAATCTA-----ATTATAAACTTCACTTCACCCTACTCCCAATCCTACTTAGAATCTTTTAATGGCTTTTCACTGTCAAGTACCGTACCTATCACAGCAT----------------------------CTGACCTTAAATGTTATCTGAACTGAGCCATTGTCTACATTTTGTGATAATTCAATTTACTATTAAGTCTAGTTATCTAATTGTGTAGAGCAATTAGAGTGGCAAAATAGTGA-TAAAA----AGCACTAAATGACTAACGTGAA------------ACCTG-AATAATAAGGTG------TT---------------------ATTATTAGCT---------------TATTTTTGCCTCACACAAAAGAACTTC----------CA-T-AAACTTTCACAG--ATTATCTCAATAATTTCTTGGTcccattttaaagattaggaaa---c--gtgctcagaaagatgatacaccgacaaatggcacaaccaagacccgaaactgtatcttttgactcacagt--------------ctgtgattttCAAGTTTTATGATAAAGCCATCAGTTACTCGCTACTTCATTTCTAAAATAACTGAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80707863 677 + 95678458 CATCCTGTCAATTTTACCTTCTGAATCTCTCAATACAGCTCCGCTTCCCTCTAGCCCATTCTAGCATGACC-TTCCCTGTCACTCAGACTCTTACATGACAATC-ACCTAACTTCTCTCTGCACTTTTACTCTCCTC-TAATCTGTGTAGGTATCTTT-TTAAAAAACAAATCTA-----ATTATAAACTTCACTTCACCCTACTCCCAATCCTACTTATAATCTTTTAATGGCTTTTCACTGTCAAGTACCATACCTATCATGGTATCTGATCTTAAATGTTATCCGAACTTAGCCTGATCTTAAATGTTATCTGAACTGAGCCGTTGTCTACATTTTGTGATAATTCAACTTACTATTAAGTCTAGTTCTCTAATTGTATAGAGCAACTAGAGTGACAAAGTAGTGA-TAAAA----AGCACTAAATGACTAACGTGAA------------ACCTG-AACAATAAGGTG------TT---------------------GTTGTTACCT---------------TATTTTTGTTTCACACAAAagaacttc----------ca-g-aaactttcacag--gttatctcaataatctcttggtcccattttaaagattaggaaa---c--atgct-agaaagataatacactgacaaatggcacaactaagacctaaaactgtatcttttgactcaaagt--------------ctgtgatttccaAGTTTTAGGATAAAGCCACTAGTCACTCGCTACTTCATTTCTAAAATGGCTGAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81134435 677 - 96509753 CATCCTGTCAATTTTACCTTCTGAATCTCTCAATACAGCTCCGCTTCCCTCTAGCCCATTCTAGCATGACC-TTCCCTGTCACTCAGACTCTTACATGACAATC-ACCTAACTTCTCTCTGCACTTTTACTCTCCTC-TAATCTGTGTAGGTATCTTT-TTAAAAAACAAATCTA-----ATTATAAACTTCACTTCACCCTACTCCCAATCCTACTTATAATCTTTTAATGGCTTTTCACTGTCAAGTACCATACCTATCATGGTATCTGATCTTAAATGTTATCCAAACTCAGCCTGATCTTAAATGTTATCTGAACTGAGCCGTTGTCTACATTTTGTGATAATTCAACTTACTATTAAGTCTAGTTCTCTAATTGTATAGAGCAACTAGAGTGACAAAGTAGTGA-TAAAA----AGCACTAAATGACTAACGTGAA------------ACCTG-AACAATAAGGTG------GT---------------------GTTGTTACCT---------------TATTTTTGTTTCACACAAAAGAACTTC----------CA-G-AAACTTTCACAG--GTTATCTCAATAATCTCTTGGTCCCATTTTAAAGATTAGGAAA---C--ATGCT-AGAAAGATGATACACTGACAAATGGCACAACTAAGACCTAAAACTGTATCTTTTGACTCAAAGT--------------CTGTGATTTCCAAGTTTTAGGATAAAGCCACTAGTCACTCGCTACTTCATTTCTAAAATGGCTGAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76390518 677 + 90941950 CATCCTGTCAATTTTACCTTCTGAATCTCTCAATACAGCTCCACTTCCCTCTAGCCCATTCTAACATGACC-TTCCCTGTCACTCAGACTCTTACATGACAATC-ACCTAACTTCTCTCTGCACTTTTACTCTCCTC-TAATCTGTGtaggtatcttt-ttaaaaaacaaatcta-----attATAAACTTCACTTCACCCTACTCCCAATCCTACTTATAATCTTTTAATGGCTTTTCACTGTCAAGTACCATACCGATCATGGTATCTGATCTTAAATGTTATCTGAACTGAGCCTGATCTTAAATGTTATCTGAACTGAGCCGTTGTCTACATTTTGTGATAATTCAACTTACTATTAACTCTAGTTCTCTACTTGTATAGAGCAACTAGAGTGACAAAGTAGTGA-TAAAA----AGCACTAAATGACTAACGTGAA------------ACCTG-AACAATAAGGTG------TT---------------------GTTGTTACCT---------------TATTTTTGTTTCACACAAAAGAACTTC----------CA-G-AAACTTTCACAA--GTTATCTCAATAATCTCTTAGTCCCATTTTAAAGATTAGGAAA---C--ATGCT-AGAAAGATGATACACTGACAAATGGCACaactaagacctaaaactgtatcTTTTGACTCAAAGT--------------CTGTGATTTCCAAGTTTTATGATAAAGCCACCAGTCACTCGCTACTTCGTTTCTAAAATGGCTGAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18659483 668 + 33263144 CATCCTGTCAATTTTACTTCTGAAATCTCTCAATACAGCTCCGCTTCCCTCTAGCCCATTCTAGCATGACC-TTCCCTGTCACTC--------ACATGACAATC-ACCTAACTTCTCTCTGCACTTTTACTCTCCTC-TAATCTGTGTAGGTATCTTT-TTAAAAAACAAATCTA-----ATTAT-AACTTCACTTCACCCTACTCCCAATCCTACTTATAATCTTTTAATGGCTTTTCACTGTCAAGTATCATACCTATCATGGTATCTGATCTTAAATGTTATCTGAACTGAGCCTGATCTTAAATGTTATCTGAACTGAGCCGTTGTCTACATTTTGTGATAATTCAACTTACTATTAAGTCTAGTTCTCTAACTGTATAGAGCAACTAGAGTGACAAAGTAGTGA-TAAAA----AGCACTAAATGACTAACATGAA------------ACCTG-AACAATAAGGTG------TT---------------------GTTGTTACCT---------------TATTTTTGTTTCACACAAAAGAACTTC----------CA-G-AAACTTTCACAA--GTTATCTCAATAATCTCTTGGTCCCATTTTAAAGATTAGGAAA---C--ATGCT-AGAAAGATGATACACTGACAAATGGCACAACTAAGACCTAAAACTGTATCTTTTGACTCAAAGT--------------CTGTGATTTCCAAGTTTTATGATAAAGCCACCAGTCACTCGCTACTTCATTTCTAAAATGGCTGAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198367317 628 + 210400635 CATCCTGTCAGTTTTCCCTTCTGAATCTCTC-ATACAGTTCTGCTTCCCTCTAGCCCATTCTATCATGTCA-TTCCCTGTCACTC------TTATA-GACAATC-ACCTAATTTCTCTCTGAGCTTTTACTCTCCTC-TAATCTGCGTAGGCATCTTT-TGAAAAAACAAATCTA-----ATTATAAACGTCACTTCACCCTACTCCCAATCCCACTTACAATCTTTTAATGGCTTTTCAGGGTCAA-----ATACCTATCACAGTAT----------------------------CTGATCTTAAATGTTATCTGAACTGAGCCATTGTCTACATTTTGTGGTAACTCAATTTACTATTAAATCTAGTTCTCTAATTGTGTAGATGAATTAGAGTGGCAAAATAGTAATTAAAA----AGCACTAAATGACTAACATGAA------------ACCTG-AATAATAAGGCA------TT---------------------GTTATTACCT---------------TATTTTTGCTTCACACAAAAGAACTTC----------CAGG-AAACTCTCACAG--ATTATCTCAATAATCTCTTGGTcccattttaaagattaggaaa---c--aagctcag-------aTACACTGACAAATGTCACAACTAAAACCCAAAACTGTATCTGTTGACTTACAGT--------------CTGTGATTCCCAAGTTTTATGATAGAGCCATCAGTTA----CTACTTCATTTCTAAAATAACTGAT i calJac3.chr1 C 0 C 0 s mm10.chr15 77198337 588 + 104043685 CACCTTGCCTGTGTTACCTCTGGGCTTTCCCAG---GGTCCCACTTAC--------------------ACC-AGCCCTGTCTCTGAGGCCACTTCATGA--GTC-ACTTTACT--TCTCTGCATTGTTACTCTGCCT-TAATTTGTATAGATAGCTTT---AAAAAATAAAACTACAACTACTATATATTCTATTTCA-TATACTAATAA-CCTATTTAAAGTCTCTTAACATTTCTTCATTGCCAGGTAT----CCATTTGTAGAAT----------------------------CTAGCCTT--ATGTTATCTGAG-TGAATGGTC-TCTACA-TTTATATTAACATAACTTAATAGT--GTCTCATTCTCTAGTCCTGTAGACCAGTTAGAATGGTAAGTGATTTC-TGGAA----AGTGGGGACT---TAGCACGTA------------CCTTCTATTTAAAAGGTGCTTAAATT---------------------ATTGTTGCCT---------------TATATTTGCTTAGCACAAACTAATTTT----------GA-GAAAACTTTCACAGAAATTACACCAATTGGCTATCCATCCTGTTTTGGAAATGTGGACA---CTACTACTCAGAAATGCCACAAACTGATGCACAGCACAAGTAAGGCCAA--------------GGTTCAT--T--------------CTAAGACACCCAGGCTTCATGGGGAAGGTGTGGG------------------CTAAGATGGCCAAC i mm10.chr15 C 0 C 0 s canFam3.chr10 40980716 717 - 69331447 CATCCTGTCAGTTGTACCCTGGGCACATCTC-TCACAGGTCCACTGGTCTCTGGCACAGGCTGCCCTTACCTTTCTCTGCCACTTCCACTATTACACACCAA-C-ACTTTGCCTCTCTCTGCACTCTTACTCCCCTC-TAATCTGTGCAGGTATCTTTTTTAAAAAACAAATCTA-----ATTATCAACTCCACTTCAGCCTACTCCCAATCCTACTCAAAATCTTTTAATGGCTTTTCACTGCCAAGTAT----CTATTCACAGGATCTGGC-----------------------CTGGCCTCCAGTGTTATCTGAACTGAACTGTT-TCTACATTTTGTGGTAACTCAATTCACTATTCAGTCTAGTTCTCTTGCTGTATAGACCAATTAGAATGGCAAAGCTGTGA-CCAAAAGTGAGCATTAAAAGACTAGCCTGgagacacatgggtggctca-gatagttaagcg------tccaactactgattttggttcaggtcatgatctcagggtcctgagatctagttctacctca--------aactttgcgctcagtggg-g-agtctgtttgag--attccctt-gccctctgcctttccctcgcCAAAAAAGAAGAAAGCTC--ATGCT-AGAAAAGTCATACATTGGCAAATGGTTTTAACGGGACCAAAAACTCTGTCTTCTGACTCACAGCCATCGGTGTGATCACAGCGACTTCCATGTTTTAGGATAAAGCCATCAGTTAC-AGTGACTTTATTT-TAAAATGGTGGAT i canFam3.chr10 I 331 I 218 a score=10845.000000 s hg38.chr22_KI270876v1_alt 211096 3 + 263666 ATG s panTro4.chr22 34590653 3 + 49737984 ATG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31010672 3 + 46535552 ATG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100564232 3 - 115148730 ATG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80708540 3 + 95678458 ATG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81135112 3 - 96509753 ATG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76391195 3 + 90941950 ATG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18660151 3 + 33263144 ATG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198367945 3 + 210400635 ATG i calJac3.chr1 C 0 C 0 s mm10.chr15 77198925 3 + 104043685 AGG i mm10.chr15 C 0 C 0 e canFam3.chr10 40981433 218 - 69331447 I a score=397796.000000 s hg38.chr22_KI270876v1_alt 211099 117 + 263666 CA--TTTTTCTAAGATTATTCCAT-----------GAATGTTCCTAAGAA-----TATATCTTTTTCGTAACCTGAAAAATCAAGGTATACACAGTTAAGTAA-TTGTCTCAAGTAACGAAGGGTGATGAAAACAG s panTro4.chr22 34590656 117 + 49737984 CA--TTTTTCTAAGATTATTTCAT-----------GAATGTTCCTAAGAA-----TATATCTTTTTCGTAACCTGAAAAATCAAGGTATACACAGTTAAGTAA-TTGCCTCAAGTAACGAAGGGTGATGAAAACAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31010675 117 + 46535552 CA--TTTTTCTAAGATTATTCTAT-----------GAATGTTCCTAAGAA-----TATATCTTTTTCGTAACCTGAAAAATCAAGGTATACACAGTTAAGTAA-TTGTCTCAAGTAACGAAGGGTGACGAAAACAG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100564235 117 - 115148730 CA--TTTTTCTAAGATTATTCCAT-----------GAATGTTCCTAAGAA-----TATATCTTTTTCGTAACCTGAAAAATCAAGGTATACACAGTTAAGTAA-TTGTCTCAAGTAACAAAGGGTGACAAAAACAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80708543 117 + 95678458 CA--TTTTTCTAAGATTATTCCAT-----------GAATGTTCCTAAGAA-----TACATCTTTTTCATAACCTGAAAAATCAAGGTATATGCAGTTAAGTAA-TTGTCTCAAGTAACGAAGGGGGAAGAAAGCAG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81135115 117 - 96509753 CA--TTTTTCTAAGATTATTCCAT-----------GAATGTTCCTAAGAA-----TACATCTTTTTCATAACCTGAAAAATCAAGGTATATGCAGTTAAGTAA-TTGTCTCAAGTAACGAAGGGGGAAGAAAGCAG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76391198 117 + 90941950 CA--TTTTTCTAAGATTATTCCAT-----------GAATGTTCCTAAGAA-----TACATCTTTTTCATAACTTGAAAAATCAAGGTATATGCAGTTAAGTAA-CTGTCTCAAGTAACAAAGGGGGAAGAAAGCAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18660154 112 + 33263144 CA--TTTTTCTAAGATTATTCCAT-----------GAATGTTCCT----------TACATCTTTTTCATAACCTGAAAAATCAAGGTATATGCAGTTAAGTAA-TTGTCTCAAGTAACGAAGGGGGAAGAAAGCAG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198367948 115 + 210400635 TA----TTTATAAGATTATTCCGT-----------GAATGTTCCTAAGAA-----TATATCTTTTTCATAACATGAAAAATCAAGATATACACAATTAAGTAA-CTGTCTCAAGTAACTAAGGGTGATGAAAACAG i calJac3.chr1 C 0 C 0 s mm10.chr15 77198928 109 + 104043685 GATGTTCTTCTAAGA--GCTCCATGGACAGTTCCAGAATGTTCCCAAGCACTG--TGCCTTCCTTCTACAACCTG---------------CACAGC--------ATGGCTCAAGGAAGCAGTGGTGGTGAGAACAG i mm10.chr15 C 0 I 545 s canFam3.chr10 40981651 122 - 69331447 CA--TTTTTCTGAGAGGACTCCAT-----------TAATGTTCCCAAGAACTAACCACATTCTTTTCACAACCTG-GACACCAAGGTATATACAGCTAAGTGACTTGTCTCAAGGAATTAATGGATATGGAAACAG i canFam3.chr10 I 218 C 0 a score=211039.000000 s hg38.chr22_KI270876v1_alt 211216 60 + 263666 AATTCAGGTTTCCTTATTTTCATTTCTCTACTCTAGCCTTGTACCATGCTGAATGCTAGT s panTro4.chr22 34590773 60 + 49737984 AATTCAGGTTTCCTTATTTTCATTTCTCTACTCTAGCCTTGTACCATGCTGAATACTAGT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31010792 60 + 46535552 AATTCAGGTTTCCTTATTTTCATTTCTCTACTCTAGCCTTGTACCATGCTGAATGGTAGT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100564352 60 - 115148730 AATTCAGGTTTCCTTATTTTCATTTCTCTACTCTAGCCTTGTACCATGCTGAATGGTAGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80708660 60 + 95678458 AATTCAGGTTTCCTTATTTTCATTTCTCTACTCTAGCCTTGTGCCATGCTGAATGGTAGT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81135232 60 - 96509753 AATTCAGGTTTCCTTATTTTCATTTCTCTACTCTAGCCTTGTGCCATGCTGAATGGTAGT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76391315 60 + 90941950 AATTCAGGTttccttattttcatttctctactcTAGCCTTGTGCCATGCTGAATGGTAGT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18660266 60 + 33263144 AATTCAGGTTTCCTTATTTTCATTTCTCTACTCTAGCTTTGTGCCATGCTGAATGGTAGT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198368063 55 + 210400635 AATTCAGGTTTCCTTATTTTCAT-----TACTCTAGCCTTGTGCCATACTTAACAGTAGT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40981773 59 - 69331447 AATTCAGGGTACCTTATTTTTGTTTCTCTAGTCTAGCC-CATAGCATGCTAAATGGCAGC i canFam3.chr10 C 0 C 0 e mm10.chr15 77199037 545 + 104043685 I a score=808073.000000 s hg38.chr22_KI270876v1_alt 211276 292 + 263666 ACAGGTAGTG-Tccctcatctgtgggaaatatattccaagacccccaagtagatgcctgaaactttgggtagtactgaattctatatatac--------------------------------tacgattaagtttaatttgtaagttaggcacagtaagagattaatgataactaataataaaactgaataattatatactataataaaagttacacgaatgtggtttctttatctctctcaaaat---ataatacttttgaagtgtgattgaccttgggtaactagagatacagaaagtgaagccatggataagggggactactAT s panTro4.chr22 34590833 286 + 49737984 ACAGGTAGTG-Tccctcatctgtgggaaatatattccaagacccccaagtagatgcctgaaactttgggtagtactgaattctatatatac--------------------------------tacgattaagtttaatttataagttaggcacagtaagagatt---gataactaataataaaactgaataatcatatactataataaaagttacacgaatgtggtttctttatctctctcaaaat---ata---cttttgaagtgtgattgaccttgggtaactagagatacagaaagtgaagccatggataagggggactactAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31010852 292 + 46535552 ACAGGTAGTG-Tccctcatctgtgggaaacatattccaagacccccaagtagatgcctgaaactttgggtagtactgaattctatatatac--------------------------------catgataaagtttaatttgtaagctgggcacagtaagagattaatgataactaacaataaaattgaataattatatactataataaaagttacacgaatgtcgtttctttatctctctcaaaat---atcatacttttgaagtgtgattgaccttgggtaactagagctacagaaagtgaagccatgaataagagggactactAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100564412 291 - 115148730 ACAGGTAGTG-Tccctcatctgtgggaaatatattccacgacccccaagtagatgcctgaaactttgggtagtactgaattctatatacac--------------------------------tatgataaagtttaatttgtaagttaggcacagtaagagattaatgataactaataataaaattgaataattatatactacaataaaagttacacgaatgtggtttatct-cctctctcaaaat---ataatacttttggagtgtgattgaccttgggtaactagagctacagaaagtgaaggcatggataagggggactactAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80708720 279 + 95678458 ACAGGTAGTG-Tccctcatctgtgggaaatatcttccaagacccccaagtagatgcctgaaactttgggtagtactgaattctatatatac--------------------------------tatgataaagtttaatttgtacattaggcacagtaagagattaaggataactaataacaaaattgaa------tatactataataaaagttacatgaatgtggtttctttatctctctcaa----------tacttttggaaagtgattgaccttgggtaactagagctacagaaagtgaagccatgaataacggggactactAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81135292 279 - 96509753 GCAGGTAGTG-Tccctcatctgtgggaaatatcttccaagacccccaagtagatgcctgaaactttgggtagtactgaattctatatatac--------------------------------tatgataaagtttaatttgtacattaggcacagtaagagattaaggataactaataacaaaattgaa------tatactataataaaagttacatgaatgtggtttctttatctctctcaa----------tacttttggaaagtgattgaccttgggtaactagagctacagaaagtgaagccatgaataacggggactactAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76391375 283 + 90941950 ACAGGTAGTG-TCCCTCATCTGTGGGAAATATCTTCCAAGACCCTCAAGTAGATGCCTGAAACTTTGGGTAGTACTGAATTCTATATAtac--------------------------------tatgataaagtttaatttgtacattaggcacagtaagagattaatgataactaataacaaaattgaataat--tatactataataaaagttacatgaatGTGGTTTCTTTATCTCTCTCAA----------TACTTTTGGAAAGTGATTGACCTTGGGTAACTAGAGCTACAGAAAGTGAAGCCATGAATAACGGGGACTACTAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18660326 283 + 33263144 ACAGGTAGTG-Tccctcatctgtgggaaatatcttccaagacccccaagtagatgcctgaaactttgggtagtactgaattctatatatac--------------------------------tatgataaagtttaatttgtacattaggcacagtaagagattaatgataactaataacaaaattgaataat--tatactataataaaagttacatgaatgtggtttctttatctctctcaa----------tacttttggaaagtgattgaccttgggtaactagagctacagaaagtgaagccatgaataatggggactactAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198368118 326 + 210400635 ACAGgtagtgccccctcatctgtgggaaatatgttccaagacccccaagcagatgcctgaaactttgggtagcactgaattctatgtataccatgttttcttcctatacatatacactatacatatgataaagtttaatttgcaaattaggcatagtaagagattagcagtaactaataataaaattgaataat--tatgctacaataaaagttacacaaatgtggtttctttctctctctcaaaatatcataatacttttggactgtgattggcctcaggtaaccagacctacagaaaatgaagccatggataagggggactactAT i calJac3.chr1 C 0 C 0 e mm10.chr15 77199037 545 + 104043685 I e canFam3.chr10 40981832 0 - 69331447 C a score=918188.000000 s hg38.chr22_KI270876v1_alt 211568 296 + 263666 ACTGATAAACTGGAAACCACTGAACAAATACAAGACGAGGCTAATTGTGGTATAGcaagttttagggatggacaaaccacagttcaaattctaactctgacaattgcaaactgtgtgacttt-gcaagtt-actgaaatatctgctttctcatctgtaaaatgaagataatagctaacactcaggtgcactgaggagt-----aa----------------------atgTTATCACTCAATAGACAGTTTaaaata-----aaataaaatgaaac-aaaaaaaaa-TCAGGTTCTCCCAAAAGAAGCTAGCATAAAATGAAATAAGAGCCA s panTro4.chr22 34591119 296 + 49737984 ACTGATAAACTGGAAACCACTGAACAAATACAAGACGAGGCTAATTGTGGTATAGcaagttttagggatggacaaaccacagttcaaattctaactctgacaattgcaaactgtgtgacttt-gcaagtt-actgaaatatctgctttctcatctgtaaaatgaagataatagctaacattcagatgcactgaggagt-----aa----------------------atgTTATCACTCAATAGACAGTTtaaaata-----aaataaaatgaaac-aaaaaaaaa-tCAGGTTCTCCCAaaagaagctagcgtaaaatgaaataagagcca i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31011144 293 + 46535552 ACTGATAAGCTGGAAACCACTGAACAAATACAAGAcgaggctaattgtggtacagcaagttttagggatggacaaaccacagttcaaactctaactctaacaattgcaaactgtgggacttt-gcaactt-actgaaatatctgctttctcatctgtaaaatgaagataatagctaacacccaggcgcactgaggagt-----aa----------------------atgTTATCACTCAAT----AGTTtaaaata-----aaataaaatgaaac-aaaaaaaaaCTCAGGTTCCCCCaaaagcagctagtgtaaaatgaaatcagagcca i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100564703 285 - 115148730 ACTGATAAACTGGAAACCACTGAACAAATACAAGATGAGGCTAATTGTGGTATAGcaagttttagggatggacaaaccacagttcaaattctaactctgacaactgcaaactgtatgacttt-gcaagtt-actgaaatatctgctttctcatctgtaaaatgaagataatagctaacacctaggtgcaccgaggagt-----aa----------------------atgtgatCACTCAATAGACAGTTTAAAATA-----AAAC------------AAAAAAAA-TCAGGTTCTCCCAaaagaagctagcgtaaaatgaaataagagcca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80708999 298 + 95678458 ACTGATAAACTGGACACCACTGAACAAATACAAAATGAGGTTAATTGTGGTATAGcaagttttagggatggacaaaccacagttcaaattctaactctgataactgcaaactgtataacttt-gcaagtt-actgaaatatctgctttctcatctgaaaaatgaagataatagctaacacccaggtgcactgaggact-----aa----------------------atgTTATCATTCAAT----AGTTtaaaataaaattaaataaaataaaacaaaaaaaaaA-TCAGATTCTCCCAaaagaagctagtgtaaaatgaaataagagcca i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81135571 297 - 96509753 ACTGATAAACTGGACACCACTGAACAAATACAAAATGAGGTTAATTGTGGTATAGcaagttttagggatggacaaaccacagttcaaattctaactctgataactgcaaactgtataacttt-gcaagtt-actgaaatatctgctttctcatctgaaaaatgaagataatagctaacacccaggtgcactgaggact-----aa----------------------atgTTATCATTCAAT----AGTTTaaaataaaattaaataaaataaaac-aaaaaaaaa-TCAGATTCTCCCAAAAGAAGCTAATGTAAAATGAAATAAGAGCCA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76391658 292 + 90941950 ACTGATAAACTGGACACCACTGAACAAATACAAAACGAGGTTAATTGTGGTATAGCAAGTTTTAGGGATGGACAAACCACAGTTCAAATTCTAACTCTGACAACTGCAAACTGTATAACTTT-ACAAGTTAACTGAAATATCtgctttctcatctgaaaaatgaagataatagctAACACCCAGGTGCACTGAGGACT-----AA----------------------ATGTTATCATTCAATagacagtttaaaata-----aaataaaataaaac------aaaa-tcaggtTCTCCCAAAAGAAGCTAgtgtaaaatgaaataagagcca i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18660609 296 + 33263144 ACTGATAAACTGGACACCACTGAACAAATATAAAACGAGGTTAATAGTGGTATAGcaagttttagggatggacaaaccacagttcaaattctaactctgacaactgcaaactgtgtaacttt-gcaagttaactgaaatatctgctttctcatctgaaaaatgaagataatagctaacacccaggtgcactgaggact-----aa----------------------atgTTATCATTCAATAGACAGTTTaaaata-----aaataaaataaaac--aaaaaaaa-TCAGGTTCTCCCAAAAGAAGCTAGTGTAAAATGAAATAAGAGCCA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198368444 289 + 210400635 ACTGATAAACTGGAAACCAATGAACAAATAGA-----AGGTTAATTGTagcatggcaacttttagggatggacaaaccacagttcaaattctaactccaataactgtaaattgtatgactttagcaaatt-actgaaatatccggtttctcatctgtaaaatgaagataatagctaacttccaggtgcactaaggactaaatgaa----------------------atGTTATCACTCAATAGACAGTTTAAAAAC-----AA--------CAAC-AAGACAACA-ACAGCTTCTCCCACAAGAAGACAGTGTAAAATGAAACACAAGCCA i calJac3.chr1 C 0 I 315 s canFam3.chr10 40981832 308 - 69331447 AGTGATAAACTGAACACCATTGAACAAATAAAAAAAGATGTAATGTGTGgcacagtaaactctgaggccagacagaccagggctcaaatcctacctctgctaactgtcaattgtgtgactttagcaggtt-actaaagttgctgcttccccatctgtaaaatgaagctaatggccaactcccaggcgtgctgaggact-----aaatgaggtagacgcctaacatatatgttaccactcaataaacag-ttaaagta-----aa-------tgAAC---AAAAACA-TCAGCTTCTCCCAAAAGAGGAGAGTATGAAAGGAAA-AACAGCTA i canFam3.chr10 C 0 C 0 e mm10.chr15 77199037 545 + 104043685 I a score=855775.000000 s hg38.chr22_KI270876v1_alt 211864 280 + 263666 TAGTTTTTAAAA-GATGAGATTGCGTTtccaggtctgccatttactgcttgtcatatactctctcatggttgctttcctcacctgtacaatagggataatgatacttagtccttagcaatgttgtgaggatgaa-----atagcacataaaagGATTTCACTTATGTATGTTAATTGAATAGCATAT-AAAAATCATTATTATCTGTGTAGACAGATTCGAATAGCATTCAAAAATCATTATTACCTGTGCATACAGATTCTCTACCATGGTGTTATAAATTTGTTA s panTro4.chr22 34591415 280 + 49737984 tagtttttaaaa-gatgagattgcgtttccaggtctgccatttactgcttgttatatactctctcatggttgctttcctcacctgtacaatagggataatgatacttagtccttaacaatgttgtgaggatgaa-----atAGCACATAAAAGAATTTCACTTATGTATGTTAATTGAATAGCATAT-AAAAATCATTATTATCTGTGTACACAGATTCGAATAGCATTCAAAAATCATTATTACCTGTGCATACAGATTCTCTACCATGGTGTTATAAATTTGTTA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31011437 277 + 46535552 tagtttttaaaa-gatgagattgcgtttccaggtctgccatttactgcttgtcatatactctctcatggctgcttccctcacctgcacaatagagataaggg---ttagtccttagcaatgttgtgaggatgaa-----atAGCACATAAAAGAATTTCACTTATGTATGTTAATTGAATAGCACAT-AAAAATCATTATTATCTGTGTATACAGATTCGGATAGCATTCAAAAATCATTATTATCTGTGCACACAGATTCTCTACCATGGTGTTATAAATTTGTTA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100564988 280 - 115148730 tagtttttaaaa-gatgagattgcgtttccaggtctgccatttactgcttgtcatatactctctcatggttgctttcctcacctgtacaatagagataatgatacttagtccttagcaatgttgtgaggatgaa-----atAGCACATAAAAGAATTTCACTTACGTATGTTAATTGAATAGCACAT-AGAAATCATTATTATCTGTGTACACAGATTCGAATAGCATTCAAAAATCATTATTATCTGTGCACACAGATTCTCTACCATGGTGTTATAAATTTGTTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80709297 280 + 95678458 tagtttttaaaa-gatgagattgagtttccaggtctgccatttactgcttgtcacatactctctcatagttgctttcctcaccggtacaatagagataatgatacttagtccttagcaatgttgtgaggatgaa-----atagcacataaaagaacttCACTTATATGTGTTAATTGAATAGCATAC-AAAAATCATTATTATCTATGTACACAGATTTGAATAGCGTACAAAAatcattattatctgtgtacactgattctctgccatggtgttataaatttgtta i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81135868 280 - 96509753 TAGTTTTTAAaa-gatgagattgagtttccaggtctgccatttactgcttgtcacatactctctcatagttgctttcctcacctgtacaatagagataatgatacttagtccttagcaatgttgtgaggatgaa-----atagcacataaaagAACTTCACTTATATGTGTTAATTGAATAGCATAC-AAAAATCATTATTATCTATGTACACAGATTTGAATAGCGTACAAAAATCATTATTATCTGTGTACACTGATTCTCTGCCATGGTGTTATAAATTTGTTA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76391950 281 + 90941950 tagtttttaaaa-gatgagattgAGTTTCCAGGTCTGCCATTTACTGCTTGTCATATACTCTCTCATAGTTGCTTTCCTCACCTGTACAATAGAGATAATGATACTTAGTCCTTAGCaatgttgtgaggatgaa-----atagCACATAAAAGAACTTCACTTACATGTGTTAATTGAATAGCATACAAAAAATCATTATTATCTATGTACACAGATTTGAATAGCATACAAAAATCATTATTATCTGTGTACACTGATTCTCTGCCATGGTGTTATAAATTTGTTA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18660905 280 + 33263144 TAGTTTTTAAAA-GATGAgattcagtttccaggtctgccatttactgcttgtcatatactctctcataattgctttcctcacctgtacaatagagataaggatacttagtccttagcaatgttgtgaggatgaa-----atagcacataaaagAACTTCACTTGTATGTGTTAATTGAATAGCATAC-AAAAATCATTATTATCTATGTACACAGATTTGAATAGCACACAAAAatcattattatctgtgtacactgattctctgccatggtgttataaatttgtta i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198369048 226 + 210400635 TAGTTTTTAAAA-GATGAGATTGAGTTTCCAGGTCTGACATTTACTGCTTGTCATGTGCT-TCTCATGGTCGCTTTCCTCACTTG-ACAACAGAAAAAATGATATTTAGTCCTTAACAATGTTGTGAGGATGAA-----CTAACACATAAAAGCACCT----------TCTTAATTGAATAGCATAC-------------------------------------------AAAAatcattactacctgtgtacacacattctctaccatggtgctataaatttgtta i calJac3.chr1 I 315 C 0 s canFam3.chr10 40982140 227 - 69331447 TAGAGTCAAGACTGATGGGACTGCGCTTCCAGCAATGCCGTTTA----TTGTCATGTGctct------gtctctttcctcacatgtacaatagagacagtgatgctcagcccttagcactgctgtgaggatgaaacaagataacatctaaaagcattt----------tcttaagtgaatagcat----------------------------------------catacaaaaatcattattatCTGTGTACACATGCTCACTGCTGCTGTGTTCTAAATGCTTTA i canFam3.chr10 C 0 C 0 e mm10.chr15 77199037 545 + 104043685 I a score=20952.000000 s hg38.chr22_KI270876v1_alt 212144 6 + 263666 AGGGCA s panTro4.chr22 34591695 6 + 49737984 AGGGCA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31011714 6 + 46535552 AGGGCA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100565268 6 - 115148730 AGGGCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80709577 6 + 95678458 agggca i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81136148 6 - 96509753 AGGGCA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76392231 6 + 90941950 AGGGCA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18661185 6 + 33263144 agggca i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40982367 6 - 69331447 AGGGCA i canFam3.chr10 C 0 C 0 e mm10.chr15 77199037 545 + 104043685 I e calJac3.chr1 198369274 0 + 210400635 C a score=271783.000000 s hg38.chr22_KI270876v1_alt 212150 113 + 263666 CACTATGTCTtcgctctgttgcccaggctggaaagcagtggcgtgatctcggctcactgcaacctccacctcccgggttcaagcaattcttctgcctcagcctcctgagtagc s panTro4.chr22 34591701 113 + 49737984 CACTATGTCTtcgctctgttgcccaggctggaaagcagtggcgtgatctcggctcactgcaacctccacctcccgggttcaagcaattcttctgcctcagcctcctgagtagc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31011720 113 + 46535552 CACTATGTCTtcgctctgttgcccaggctggaaagcagtggcgccatctcggctcactgcaacctctacctcctgggttcaagcaattctcctgcctcagcctcctgagtagc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100565274 113 - 115148730 CACTATGTCTtcgctctgttgcccaggctggaaagcagtggcgtgatctcggctcactgcaacctccacctccctggttcaagtgattctcctgcctcagcctcctgagtagc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80709583 113 + 95678458 cactatgtcttcgctctattgcccaggctagaaagcagaggcgcaatctcagctcactgcaacctccgcctcctgggttcaagggattctcctgcctcagcctcctgagtagc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81136154 113 - 96509753 CACTATGTCTtcgctctattgcccaggctagaaagcagaggcgcaatctcagctcactgcaacctccgcctcctgggttcaagggattctcctgcctcagcctcctgagtagc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76392237 113 + 90941950 CACTATGTcttcgctctattgcccaggctggaaagcagaggcacaatctcagctcactgcaacttccgcctcctgggttcaagggattctcctgcctcagcctcctgagtagc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18661191 113 + 33263144 cactatgtcttcgctctactgcccaggctggaaagcagaggcacaatctcagctcactgcaacctctgcctcctgggttcaagggattctcttgcctcagcctcctgagtagc i chlSab2.chr19 C 0 C 0 e mm10.chr15 77199037 545 + 104043685 I e canFam3.chr10 40982373 0 - 69331447 C e calJac3.chr1 198369274 0 + 210400635 C a score=14642.000000 s hg38.chr22_KI270876v1_alt 212263 5 + 263666 tgaga s panTro4.chr22 34591814 5 + 49737984 tgaga i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31011833 5 + 46535552 tgaga i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100565387 5 - 115148730 tgaga i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80709696 5 + 95678458 tggga i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81136267 5 - 96509753 tggga i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76392350 5 + 90941950 tggga i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18661304 5 + 33263144 tggga i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40982373 5 - 69331447 TGAGA i canFam3.chr10 C 0 C 0 e mm10.chr15 77199037 545 + 104043685 I e calJac3.chr1 198369274 0 + 210400635 C a score=376129.000000 s hg38.chr22_KI270876v1_alt 212268 162 + 263666 ctacaggtgcgtgccaccatgcccagctaattgtttgtatttttagtagagacggtgtttcaccatgttagccagaatggtctcgatctcctgacctcatgatccgcc-atcctcggccttccaaagtgctaggattacaggcgtgagccactaaggccggcc s panTro4.chr22 34591819 162 + 49737984 ctacaggtgcgtgccaccatgcccagctaattgtttgtatttttagtagagacggtgtttcaccatgttagccaggatggtctcgatctcctgacctcatgatccgcc-atcctcggccttccaaagtgctaggattacaggcgtgagccactaaggccggcc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31011838 162 + 46535552 ctacaggtgtgtgccatcatgcccagctaattgtttgtatttttagtagagatggtgtttcaccatgttagccaggatggtctcaatcttctgacctcatgatccacc-cgccttggccttccaaagtgctaggattacaggcgtgagccactaaggccggcc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100565392 163 - 115148730 ctacaggtgcgtgccaccatgcccagctaattgtttgtatttttagtagagatggtgtttcaccatgttagccaggatggtctcgaacacctgaactcatggtctgcctgccctcggccttccaaagtgctaggattacaggcgtgagccactaaggctggcc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80709701 162 + 95678458 ttacagttgtgtgccatcacgcccagctaattttttgtatttttagtagagatggggtttcaccatgtttgccaggatggtctcgatctcctgacctcatgatctgcc-caccctggccttccaaagtgctgggatgacaggtgtgagccactaaggccggcc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81136272 162 - 96509753 ttacagttgcgtgccatcacgcccagctaattttttgtatttttagtagagatggggtttcaccatgtttgccaggatggtctcgatctcctgacctcatgatctgcc-caccctggccttccaaagtgctgggatgacaggtgtgagccactaaggccggcc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76392355 162 + 90941950 ttacagttgcgtgccaccacgcccagctaattttttgtatttttagtagagatggggtttcagcatgtttgccaggatggtctcgatctcctgacctcatgatctgcc-caccctggccttccaaagtgctgggatgacaggtgtgagccactaaggCCGGCC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18661309 162 + 33263144 ttacagttgtgtgccaccacgcccagctaattttttgtatttttagtagagatggggtttcaccatgtttgccaggatggtctcgatctcctgacctcatgatctgcc-caccctggccttccaaagtgctgggatgacaggtgtgagccactaaggccggcc i chlSab2.chr19 C 0 C 0 e mm10.chr15 77199037 545 + 104043685 I e canFam3.chr10 40982378 0 - 69331447 C e calJac3.chr1 198369274 0 + 210400635 C a score=56414.000000 s hg38.chr22_KI270876v1_alt 212430 18 + 263666 AGGGCACACTATGTCTTT s panTro4.chr22 34591981 18 + 49737984 ATGGCACACTATGTCTTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31012000 18 + 46535552 AGGGCACATTATGTCTTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100565555 18 - 115148730 AGGGCACACTATGTCTTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80709863 18 + 95678458 agggcgcactatgtcttt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81136434 18 - 96509753 agggcgcactatgtcttt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76392517 18 + 90941950 AGGGCGCACTATGTCTTT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18661471 18 + 33263144 agggcgcactatgtcttt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198369274 18 + 210400635 agggcacactatgtcttt i calJac3.chr1 C 0 C 0 e mm10.chr15 77199037 545 + 104043685 I e canFam3.chr10 40982378 0 - 69331447 C a score=4095.000000 s hg38.chr22_KI270876v1_alt 212448 1 + 263666 A s panTro4.chr22 34591999 1 + 49737984 A i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31012018 1 + 46535552 A i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100565573 1 - 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80709881 1 + 95678458 a i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81136452 1 - 96509753 a i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76392535 1 + 90941950 A i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18661489 1 + 33263144 a i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198369292 1 + 210400635 a i calJac3.chr1 C 0 C 0 s canFam3.chr10 40982378 1 - 69331447 A i canFam3.chr10 C 0 C 0 e mm10.chr15 77199037 545 + 104043685 I a score=2371369.000000 s hg38.chr22_KI270876v1_alt 212449 652 + 263666 ATCTttaatcatctttgtatttgcaacagctgg----------ctctacccattatgggcattcattaaatgttggctgaaCTGATTTATTAAGAAGACAGAATTGAACTATGAAAAAACAACAGTTCAAAATAAAATCCAGAAGTTCATCCATATAGAGCATGAATAAGAGAGGGC--------CTGGTGCCTGTCCAGCTAAGACTGCACAGACAGGGAGAACATATCCTGTTTTCTGGTAATTTAAG-TAAGTGGTCTATAATTATGTTTATTGGATAT--AAATTACATAATCATCAAACAAGTAAGTTGCCTCAGTACAGGAATCATA----TCTGTCTGTCTCTT-----------------------------------------TCCCTGTTTTTGATGATGGCGA---GAGAGGGAAAATAAATGACATAATGAATGCTTAATAGTACTGTGCAACGC-------------AAAAAAAAAAAAAAAGTT--TACAACAAATAATGGGGATTTTTCTCCATCAGGAGGCAACCTTAACAAGGGCTCCCGAGCCACGAGTACTTAACATACAAACTAAGAGGAAAAATATTTCACAAAAAACTAGTTTGTGTTTATCAAAGTTCTCCCTAGATGAATTCAAAGATACCCTCAACGTGATACAGAAAACACTTCGGAGTGG---------TGAGTAGTCTGCCTATGCAAATGTTCAAAGCAAAAAG-TTGGCTTGTACT s panTro4.chr22 34592000 655 + 49737984 ATCTttaatcatctttgtatttgcaacagctgg----------ctctacccattatgggcattcattaaatgttggctgaaCTGATTTATTAAGAAGACAGAATTGATCTATGATAAAACAACAGTTCAAAATAAAATCCAGAAGTTCATCCATATACAGCATGAATAAGAGAGGGC--------CTGGTGCCTGTCCAGCTAAGACTGCACAGACAGGGAGAACATATCCTGTTTTCTGGTAATTTAAG-TAAGTGGTCTATAATTATGTTTATTGGATAT--AAATTACATAATCATCAAACAAGTAAGTTGCCTCAGTACAGGAATCATA----TCTGTCTGTCTCTT-----------------------------------------TCCCTGTTTTTGATGATGGCGATGAGAGAGGGAAAATAAATGACATAATGAATGCTTAATAGTACGGTGCAACGC-------------AAAAAAAAAAAAAAAGTT--TACAACAAATAATGGGGATTTTTCTCCATCAAGAGGCAACCTTAACAAGGGCTCCCGAGCCACGAGTACTTAACATACAAACTAAGAGGGAAAATATTTCACAAAAAACTAGTTTGTGTTTATCAAAGTTCTCCCTAGATGAATTCAAAGATACCCTCAACGTGATACAGAAAACACTTCGGAGTGG---------TGAGTAGTCTGCCTATGCAAATGTTCAAAGCAAAAAG-TTGGCTTGTACT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31012019 655 + 46535552 ATCTttaattaactttgtatttgcaacagctgg----------ctctacccattatgggcattcattaaatgttggctgaaCTGATTTATTAAGAAGACAGGATTGATCTATGATAAAACAACAGTTCAAAATAAAATCCAGAAGTTCATCCATATAGAGCATGAATGAGAGAGTGC--------CTGGTGCCTGTCCAGCTAAGACTGCACAGACAGGGAGAACATATCCTGTTTTCTGGTAATTTAAG-TAAGTGGTCTATAATTATGTTTATTGGATAT--AAATTGTATAATCATCAAACAAGTAAGTTCCCTCAGTACAGGAATCATA----TCTGTCTGTCTCTTTCT------------------------------C-------TCCCTGTTTTTGATGATGGCGATGAGAGAGGGAAAATAAATGATATAATGAATGCTTAATAGTACTGTACACTGC----------------AAAAAAAAAAAAGTT--TACAACAAACAATGGGGATTTTTCTCCATCAGGAGGCAACCTTAACAAGGGCTCCCGAGCCATGAGTACTTAACATACAAACTAAGAGGGAAAATATTTCACAAAAAACTAGTTTGTGTTTATCAAAGTTCTCCCTAGGCGAATTCAAAGATACCCTCAACGTGATACAGAAAACACTTTGGAGTGG---------TGAGCAGTCTGCCTATGCAAATGTTCAAAGC-AAAAG-TTGGCTTGTACT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100565574 657 - 115148730 ATCTttaatcatctttgtatttgcaacagctgg----------ctctacccattatgggcattcattaaatgttggctgaaCTGATTTATTAAGAAGACAGAATTGATCTATGATAAAACAACAGTTCAAAATAAAATCCAGAAGTTCATCCATATAGAGCATGAATAAGAGAGTGC--------CTGGTGCCTGTCCAGCTAAGACTGCACAGACCGGGAGAACATATCCTGTTTTCTGGTAATTTAAG-TAAGTGGTCTATAATTATCTTTATTGGATAT--AAATTATATAATCATCAAACAAGTAAGTTCCCTCAGTACAGGAATCATA----TCTGTCTGTCTCTTTCT------------------------------C-------TCCCTGTTTTTGATGATGGCGATGAGACAGGGAAAATAAATGACATAATGAATGCTTAATAGAACTGTACACCGC---------------AAAAAAAAAAAAAGTT--TACAACAAACAATGAGGATTTTTCTCCATCAGGAGGCAACCTTAACAAGGGCTCCCGAGCCATGAGTACTTAACATACAAACTAAGAGGGAAAATATTTCACAAAAAACTAGTTTGTGTTTATCAAAGTTCTCCCTATATGAATTCAAAGATACCCTCAACATGATACAGAAAACACTTTAGGGTGG---------TGAGTAGTCTGCCTATGCAAATGTTCAAAGCAAAAAG-TTGGCTTGTACT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80709882 649 + 95678458 atc-------atctttgtatttgcaacagctgg----------ttctacccattatgggcattcattaaatgttggctgaaCTGATTTATTAAGAAGACAGAATTGATCTATGATAAAACAACAGTTCAAAATAAAATCCAGAAGTTCATCCACATAGAGCATGAGTAAGAGAGTGC--------CTGGTGCCTGTCCAGCTAAGACTGCTCAGACAGGGAGAACATATCCTGTTTTCTGGTAATTTAAG-TAAGTGGTCTATAATTATGTTTATTGGATAT--AAATTATACAA--ATCAAACAAGTAAGTTCCCTCAGTACAGGAATCATATCTGTCTGTCTGTCTCTTCCT------------------------------C-------TCCCTGTTTTTGATGATGGCGATGACAGAGGGAGAATAAATGACACAATGAATGCTTAATAGTACTGTATACCTC----------------AAAAAAAAAAAAGTT--TACAACAAACAGTGGGGA-TTTTCTCCATCAGGAGGCAACCTTAACAAGGGCTCCCAAGCCATGAGTACTTAACATACAAATTAAGCAGGAAAATATTTCACAAAAAACTAGTTTGTGTTTATCAAAGTTCTCCCTATACGAATTCAAAGATACCCTCAACATGACAGAGAAAACACTT-GGGATGG---------TGAGTAGTCTGTCTATGCAAATGTTCAAAGCAAAAAG-TTGGCTTGTACT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81136453 651 - 96509753 atc-------atctttgtatttgcaacagctgg----------ttctacccattatgggcattcattaaatgttggctgaaCTGATTTATTAAGAAGACAGAATTGATCTACGATAAAACAACAGTTCAAAATAAAATCCAGAAGTTCATCCACATAGAGCATGAATAAGAGAGTGC--------CTGGTGCCTGTCCAGCTAAGACTGCTCAGACAGGGAGAACATATCCTGTTTTCTGGTAATTTAAG-TAAGTGGTCTATAATTATGTTTATTGGATAT--AAATTATACAATCATCAAACAAGTAAGTTCCCTCAGTACAGGAATCATATCTGTCTGTCTGTCTCTTCCT------------------------------C-------TCCCTGTTTTTGATGATGGCGATGACAGAGGGAGAATAAATGACACAGTGAATGCTTAATAGTACTGTATACCTC----------------AAAAAAAAAAAAGTT--TACAACAAACAGTGGGGA-TTTTCTCCATCAGGAGGCAACCTTAACAAGGGCTCCCAAGCCATGAGTACTTAACATACAAATTAAGCAGGAAAATATTTCACAAAAAACTAGTTTGTGTTTATCAAAGTTCTCCCTATACGAATTCAAAGATACCCTCAACATGACAGAGAAAACACTT-GGGATGG---------TGAGTAGTCTGTCTATGCAAATGTTCAAAGCAAAAAG-TTGGCTTGTACT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76392536 646 + 90941950 ATC-------ATCTTTGTATTTGCAACAGCTGG----------TTCTACCCATTATGGGCATTCATTAAATGTTGGCTGAACTGATTTATTAAGAAGACAGAATTGATCTATGATAAAACAACAGttcaaaataaaatccagaagttCATCCACATAGAGCATGAATAAGAGAGTGC--------CTGATGCCTGTCCAGCTAAGACTGCTCAGACAGGGAGAACATATCCTGTTTTCTGGTAATTTAAG-TAAGTGGTCTATAATTATGTTTATTGGATAT--AAATTATACAATCATCAAACAAGTAAGTTCCCTCAGTACAGGAATCAta----tctgtctgtctcttcct------------------------------c-------tccctgtttTTGATGATGGCGATGACAGAGGGAGAATAAATGACACAATGAATGCTTAATAGTACTGtatacctc-----------------aaaaaaaaaaagtt--tacaacaAACAGTGGGGA-TTTTCTCCATCAGGAGGCAACCTTAACAAGGGCTCCCAAGCCATGAGTACTTAACATACAAATTAAGcaggaaaatatttcacaaaaaacTAGTTTGTGTTTATCAAAGTTCTCCCTATACAAATTCAAAGATACCCTCAACATGACAGAGAAAACACTT-GGGGTGG---------TGAGTAGTCTGTCTATGCAAATGTTCAAAGCAAAAAG-TTGGCTTGTACT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18661490 660 + 33263144 atc-------atctttgtatttgcaacagctgg----------ttctacccattatgggcattcattaaatgttggctgaaCTGATTTATTAAGAAGACAGAATTGATCTATGATAAAACAACAGTTCAAAATAAAATCCAGAAGTTCATCCACATAGAGCATGAATAAGAGAGTGC--------CTGGTGCCTGTCCAGCTAAGACTGCTCAGACAGGGAGAACATATCCTGTTTTCTGGTAATTTAAG-TAAGTGGTCTATAATTATGTTTATTGGATAT--AAATTATACAATCATCAAACAAGTAAGTTCCCTCAGTACAGGAATCATATCTGTCTGTCTGTCTCTTCCT------------------------------C-------TCCCTGTTTTTGATGATGGCGATGACAGAAGGAGAATAAATGACACAATGAATGCTTAATAGTAATGTATACCTC----------------AAAAAAAAAAAAGTT--TACAACAAACAGTGGGGA-TTTTCTCCATCAGGAGGCAACCTTAACAAGGGCTCCCAAGCCATGAGTACTTAACATACAAATTAAGCAGGAAAATATTTCACAAAAAACTAGTTCGTGTTTATCAAAGTTCTCCCTATACAAATTCAAAGATACCCTCAACATGACAGAGAAAACACTT-GGGGTGGTGAGTAGTCTGAGTAGTCTGTCTATGCAAATGTTCAAAGCAAAAAG-TTGGCTTGTACT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198369293 657 + 210400635 acctttaatcatctttgtatttgcaacagctgg----------ctctacccgttatgggcattcattaaatgttggctgaaCTGATTTATTAAGAAAACAGAATTGATTTATGACAAAACAACAGTTCAAAATAAAATCCAGAAGTTAATCCATACAGAGTTTGAGTAAAAGAGTGC--------CTGGTGCCTGGGCAGCTAATACTGCTCAGACAGGGAGAGTACATCCTGTCTTATGGTAATTTAAGTTAAGTGGTCTATAATTATGTTTATTGGATAT--AAATTATATAATCATTAAACAAGTAAGTTCCCTCAATATAGGAATCATA----TCTGTCTGTCTCTTTCT------------------------------C-------TTCCTGTTTTTGATGATGATGATGAGAGATGGACAATGAATGACACAATGAATGCTTACTGGTACTGTACACCCC---------------CCCAAAAAAAAAAGTT--TACCACAAACAATGGGGA-TTTTCTCCATCAGGAGGCAACCTTAACAAGGGCTCCCAAGCCATGAGTACTTAACACACAAATTAAGAGAAAAAATATTTTAGAGAAAACTAGTTTGTGTTTATCAAAGTTCTCCCTATATGAATTCAAAGATACCCTCAACATGATAGAGAAAACACTTTGGAGTTG---------TGAGTAGTCTGCCTATGCAAATGTTCAAAGCAAAAAG-TTGGCTTGTCCT i calJac3.chr1 C 0 C 0 s mm10.chr15 77199582 610 + 104043685 ATCTCTGACCATCTTTGTATTTGCTACAGCTAG----------TTCCACTCACTGCAGGCACTCCTTAAA--CTGGGTGAATTGATTTATTAAGAAGACAGGACTGACTGATGACCAAACAACAGTTC-AAGTGAGATCTGGAGGTCCAGTCACACAGCACACAATCCTGTGAGAGCTCCCACGGCCGAGGCAAGCCTAGTTCAGACT----------GGAGAGTATGGCATGCCTTGTGGGGAGTTTGG-AAAGTGAAGTGTAATCTTGTTTACTTGATTTTGAAAATGCATAATCATCAAGCAAACATGTCTGCTCAACACAGGCCCCAGG----CCTTTCTGTCTTCTTCG------------------------------CCTTGTTGTCCTCATCTGAGCTTCTGTAGAGACGCCAGGGTGAGTAAATGACACAGGGAAT-CTCCACAGCACTGT------C----------------------------------------------------TATACTCCC----AAGGTAGCC-TAATGAGGGCTCCCA--CCACCACCACTTCAAATATCAACAAGG--GGTGAATATTTCACATAGAACTAATTTGTATTTGTCAAAGTTCTTCCTATGTGAATTCAAGGACACATTTGACACAGTGGAGAAAACATTCAGGGGTGC---------TTTACAGTCTACTGATGCAAATATTCAAAGCCAAAAG-TTGGCCTGTgct i mm10.chr15 I 545 I 102 s canFam3.chr10 40982379 691 - 69331447 GTCTTTAATCATCTTTGTCTTCGTACCAGCTGGTAGCACAGTCCTCTGCCCATCAGAGGCATCCGTTAAATGTCGGCTGAGCTGAGTTATTAAGA--ACAGGGCTGAACTATGACAA---AACAGTTTAAAATGAAATCCACAAGTTCATCCATTGAGAATATGGGTAAGAGA--GC--------CTGGAACCAGTCTAGCTAAGATCAGCTAGACAGGGAGAACACTTCCTAATTTCTGGGAATTTAAA-TAAATGGTCTATAATTTTGTTTACTGGATAT--AAATTGTATAATCATCAAACAA----GTTCCCTCACTACAGGAATTATG------TGCCTCCCTCTTCCTTACCTTCCCCTCCCCCTTCACTCCACCCTCC-------TTCCTGTTTCAGGCCATGAAG--GAGAGAGAGAATATAAAGGACAAAAGCAATGCTTAACAGTATTGTAACCCTCCACACATATACCAGAAAAAAAAAAAAAAGCTGAGAAAAAAAACAACGGGGA-TGTTGTCTATCAAGAGGCAACTTTAACAAGGGTTCTCTAATCACAGGTTCTTAAAATACTGATTGAG--GGGAGATATTTCACATGAAACGAGTTTGTGTTTATCGGAGTTCTCCCTACA------CAAAGACATCCTTAATTTGCTAGAGGAAATGTTCTAGGGTGG---------TAAGCAGTCTGTTCATGCAAAAGTTCAAAGCAAAAAGTTTAGCTTGTGCC i canFam3.chr10 C 0 C 0 a score=1385634.000000 s hg38.chr22_KI270876v1_alt 213101 404 + 263666 AGTTatttact----------------------gagcatctattgtgtgcca-ttcact--------atgttaagtata-ttcatagattatct-------------------------------------caaat--cttcacaacaa----------------------------------tcctgagtgcc-----------------------------------------------------------actattttccctatatgacaaat---gaaactgaggctcagagaggttaagtaac---ttaacagtcatacacttggaaatggcaggggtgggatttagacctagtgaggtttctgaaacccgtattcttttcaccacctcatgctgccAACTGACGCTACCAAATTCACT-AAAAAAGAGGATGACTCAACAGGAAAGCGGGGAGAAAATCTGGCAAAGCAGCATAGAGAGCGCACAAGATAGCATTCTATCTCAGAGTTCTAGACACAC-AGGAGCAAATTAATGAGCTGCAT-------CTAACTACACAAATGAAAATGCTTGGAT s panTro4.chr22 34592655 404 + 49737984 AGTTatttact----------------------gagcatctattgtgtgcca-ttcact--------atgttaagtata-ttcatagattatct-------------------------------------caaat--cttcacaacaa----------------------------------tcctgagtgcc-----------------------------------------------------------actattttccctatatgacaaat---gaaactgaggctcggagaggttaagtaac---ttaacagtcatacacttggaaatggcagaggtgggatttagacctagtgaggtttctgaaacccgtattcttttcaccacctcatgctgccAACTGACGCTACCAAATTCACT-AAAAAAGAGGATGACTCAACAGGAAAGCGGGGAGAAAATCTGGCAAAGCAGCATAGAGAGAGCACAAGATAGCATTCTATCTCAGAGTTCTAGACACAC-AGGAGCAAATTAATGAGCTGCAT-------CTAACTACACAAACGAAAATGCTTGGAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31012674 404 + 46535552 AGTTatttact----------------------gagcatctactgtgtgcca-ttcac----------tgttaagtatatttcatagattatct-------------------------------------caaat--cttcacaacaa----------------------------------tcctgagtgcc-----------------------------------------------------------actattttccctatatgacaaat---gaaactgaggctcagagaggttaagtaac---ttaacagtcatacacttggaaatggcagaggtgggatttagacctagcgaagtttctgaaacccgtattcttttcaccacctcatgctgccAACTGACGCTACCAAATTCACTAAAAAAAGAGGATGACCCAACAGGAAAGCGGGGAGAAAATCTGGCAAAGAAGCATAGAGAGAGCACAAGATAGCATTCTATCTCAGAGTTCTAGACACAC-AGGAGCAAATTAATGAGCTGCAT-------CTAACTACACAAATGAAAATGCTTGGAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100566231 401 - 115148730 AGTTatttact----------------------gagaatctattgtgtgcca-ttcact--------atgttaagtatgtttcatagattatgt-------------------------------------cgaat--cttcacaacaa----------------------------------tcctgagtgcc-----------------------------------------------------------actattttccctatatgataaat---gaaactgaggctcagagaggttaagtaac---ttcacagtcacacacttggaaatggcagaggtgggatttagacctagtgaagtttctgaaacccgtattcttttcaccacctcatgctgccAACTGACGCTACCAAATTCACT-AAAAAAGAGGATGACTCAACAGGAAAGCGGGGAGAAAATCTGGCAAAGAAACATAGAGAGAGCATAAGATAGCAT----TCTCAGAGTTCTAGACACAC-AGGAGCAAATTAATGAGCTGCAT-------CTAACTACACAAATGAAAATGCTTGGAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80710531 408 + 95678458 AGTTatttacc----------------------gagcatctattgtgggcca-ttcacc--------atgttaagtatgtttcacagattatct-------------------------------------caaat--cttcacaacaa----------------------------------tcctgagtgct-----------------------------------------------------------actattttccctatatgacaaat---gaaactgaggctcagagaggttaagtaacttgttaacagtcaaacacttggaaatggcagaggtgggatttagacctagtgaagtttctgaaacccatattcttttcaccacctcaggctgccAACTGACGCTACCAAATTCACT-AAAAAAGAGGATGACTCAACAGGAAAGCGGGGAGAAAATCTGGCAAAGAAGTATAGAGAGAGCACAAGATAGCATTCTATCTCAGAGTTCTAGACACAC-GGGAGCAAATTAATGAGCTGCAT-------CTAACTACACAAATGAAAATGCCTGGAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81137104 408 - 96509753 AGTTatttacc----------------------gagcatctattgtgggcca-ttcacc--------atgttaagtatgtttcacagattatct-------------------------------------caaat--cttcacaacaa----------------------------------tcctgagtgct-----------------------------------------------------------actattttccctatatgacaaat---gaaactgaggctcagagaggttaagtaacttgttaacagtcaaacacttggaaatggcagaggtgggatttagacctagtgaagtttctgaaacccatattcttttcaccacctcaggttgccAACTGACGCTACCAAATTCACT-AAAAAAGAGGATGACTCAACAGGAAAGCGGGGAGAAAATCTGGCAAAGAAGTATAGAGAGAGCACAAGATAGCATTCTATCTCAGAGTTCTAGACACAC-GGGAGCAAATTAATGAGCTGCAT-------CTAACTACACAAATGAAAATGCCTGGAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76393182 408 + 90941950 AGTTATTTACC----------------------GAGCATCTATTGTGGGCCA-TTCACC--------ATGTTAAGTATGTTTCACAGATTATCT-------------------------------------CAAAC--CTTCACAACAA----------------------------------TTCTGAGTGCT-----------------------------------------------------------ACTATTTTCCCTATATGAcaaat---gaaactgaggctcagagaggttaagtaacttgttaaCAGTCAAACACTTGGAAATGGCAGAGGTGGGATTGAGACCTAGTGAAGTTTCTGAAACCCATATTCTTTTCACCACCTCAGGCTGCCAACTGACGCTACCAAATTCACT-AAAAAAGAGGATGACTCAACAGGAAAGCGGGGAGAAAATCTGGCAAAGAAGTATAGAGACAGCACAAGATAGCATTCTATCTCAGAGTTCTAGACACAC-GGGAGCAAATTAACGAGCTGCAT-------CTAACTACACAAATGAAAATGCCTGGAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18662150 408 + 33263144 CGTTatttact----------------------gagcatctattgtgggcca-ttcacc--------atgttaagtatgtttcacagattatct-------------------------------------caaat--cttcacaacaa----------------------------------tcctgaatgct-----------------------------------------------------------actattttccctatatgacaaat---gaaactgaggctcagagaggttaagtaacttgttaacagtcaaacacttggaaatggcagaggtgggatttagacctagtgaagtttctgaaacccatattcttttcaccacctcaggctgccAACTGACGCTACCAAATTCACT-AAAAAAGAGGATGACTCAACAGGAAAGCGGGGAGAAAATCTGGCAAAGAAGTATAGAGAGAGCACAAGATAGCATTCTATCTCAGAGTTCTAGACACAC-GGGAGCAAATTAATGAGCTGCAT-------CTAACTACACAAATGAAAATGCCTGGAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198369950 404 + 210400635 AGTTatctact----------------------gagtaactattgtgtgccacctcatt--------atgttaagtatgtttcatagattatct-------------------------------------taaat--ctttacaaaaa----------------------------------tcctgagtgcc-----------------------------------------------------------actattttccctatatgacaagt---gaaactaaggttcagagaggttaagtaacctgttaacagtcatacacttggaaatggcagaggtgggatttagacctagtcaagtttctgaaacctatattctcttcaccacctcatgcagccGACTGACATTACCCAATTCACT-AAAAAAGAGGATTACTCAACAAGAAAACGGGGAGGAAATCTGCCAAAGAAGCATAGACAG------AGGTAGCATTCTATCTCAGAGTTCTAGACACACAGGGAGCAAATTAATAAGCTGCAT-------CTAAATACACAAAAGAAAATGCTTGGAT i calJac3.chr1 C 0 I 307 s mm10.chr15 77200294 496 + 104043685 ATTCATTTGCCCATGTGTTTAGAACAATAGAGAGAGTGTCTCTT---TGCCA-TTCTCCTCTTTGGTGAATTTGGTATG-TTAGTGGGTGGCCTAATCTGGTCAGTTTGAAGCCACCCTGAGCTACATAAACAAAC--TGCCGAAACAAACAAAATACAAACAGTTGTTGTGTGCTAGTTATTTACTGAGCGACTACCTATACCATGTCCTTTGTCTCATAGTCATATCAAATCATGAAATCACATGGTATATATTAATTTCCCTGCACAATCAATGAGGAAAC--AGGTTT--ACAGGTTAAGTAAC---TTTAC-------CAC-TGGGAAGGCCACAAGTAGCATGTAGA------GAAG--TCTAACACTTA-AGACTCTGGACCAGATTAGGCCACCCACTAACA-TACCAAATTCACC-AAAGAGGAGAA-----------------------------TGGCAAAGAGA---------------------CACTCTCTCT-ATTGTTCTAAACACAT-GG--GCAAATGAATGAGCTGTACCTTACTGCTAACTACACAAACTAAAACACTTAGAT i mm10.chr15 I 102 C 0 s canFam3.chr10 40983070 410 - 69331447 AGTTattcact----------------------gagcatctactatgtgcca-tacccc--------acacttagcatacttcttagatgatct-------------------------------------tgaattctctcacaataa----------------------------------tcccatgtgat-------------------------------------------------------aggtactattttccctatgggacagatgaagaaatcgaggttc--agaggttaatttg----ttcatagccacaccaccaaaaatgacagaggtaggatttatgcccagccacatctc-aaaacccatattcttggcgccataccatgctgtCTACTGATGCTACCAAAGTCTTT-TAAAAGGAAGGGGACTCAACAGGAAAGCAGGGTGAAGACCTGGCAGAGACATATACAGAGAGCACAAGATGGCATTCCACCACCTTGTTCTAGACACAT-AGAAGCAAATTAAGGAATCACAT-------CTAACCGCACAAACCAAAATGCCTGGAT i canFam3.chr10 C 0 C 0 a score=1781063.000000 s hg38.chr22_KI270876v1_alt 213505 540 + 263666 AAGCTGTAACTTTTACTCTTCA---------------ATTCTACAGGTTCTAAAAATGCCCATCTGCACCAATTCAGAGGTACTGACAACTGAACATAGTCCAGTAATTTTTCTAGAATACTCAGAAAGAGTGCCTTTGACCCATTACTGGTACCAAACCAAGCATGC-AAGGGAGGTGATACA----GTATGT-TTGACAGTTTTCTC-TGATCACCTA-GACCTAAACATCCTTGCAGAACTGGGCATTTTTCAGGCATATCTACTGTTACATAAAATTCACTtcatggaatttcaga--atcagaagaggttcagttcaattatcttacgcatgtggaaactgagtctcagaatagttatatgactgccg-aaagtcacatggcttggtact--------------------gg-ctaaacctacactaaaactctcatctcctattcctag--------------tccacagcagctcctctgtgcct-cccactGAATGCGTGACCACCAAGGCTTCCTTCTATGTATCTGGGCATTATTC-GCTATAGCTCCTTCTGCACGTCCTCAATGAAGTAAACA---AA-------GGCATTGGGCTAGATG s panTro4.chr22 34593059 540 + 49737984 AAGCTGTAACTTTTACTCTTCA---------------ATTCTACAGGTTCTAAAAATGCCCATCTGCACCAATTCAGAGGTACTGACAACTGAACATAGTCCAGTAATTTTTCTAGAATACTCAGAAAGAGTGCCTTTGACCCATTACTGGTACCAAACCAAGCATGC-AAGGGAGGTGATACA----GTGTGT-TTGACAGTTCTCTC-TGATCACCTG-GACCTAAACATCCTTGCAGAACTGGGCATTCTTCAGGCATATCTACTGTTACATAAAATTCACTtcatggaatttcaga--atcagaagaggttcagttcaattatcttacgcatgtggaaattgagtctcagaatagttatatgactgccg-aaagtcacatggcttggtact--------------------gg-ctaaacctacactaaaactctcatctcctattcctag--------------tccacagcagctcctctgtgcct-cccactGAATGCGTGACCACCAAGGCTTCCTTCTATGTATCTGGGCATTATTC-GCTATAGCTCCTTCTGCACGTCCTCAATGAAGTAAACA---AA-------GGCATTGGGCTAGATG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31013078 541 + 46535552 AAGCTGTAACTTTTACTCTTCA---------------ATTCTACAGGTTCTAAAAATGCCCATCTGCACCAATTCAGAGGTACTGACAACTGAACACAGTCCAGTAATTTTTCTAGAATAGTCAGAAAGAGTGCCTTTGACCCATTACTGGTACCAAACCAAGCATGC-AAGGGAGGTGAGATA----GTATGT-TTGACAGTTTTCTC-TGTTCACCTG-GACCTAAACATCCTTGCAGAACTAGGCATTTTTCAGGCATATCTACTGTTACATAAAATTCACTtcacggaatttcaga--atcagaagaggttcagttcaattatcttatggatgtggaaattgagtctcagaatagttatatgactcccgaaaagtcacatggcttggtact--------------------gg-ctaaacctacactaaaactctcatctcctattcctag--------------tccacagcagctcctctgtgcct-cccactGAATGTGTGACCACCCAGGCTTCCTTCTACGTATCTGGGCATTATTC-GCTATAGCTCCTTCTGCACGTCCTCAATGAAGTAAACA---AA-------GGCACTGGGCTAGATG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100566632 540 - 115148730 AAGCTGTAAC-TTTACTCTTCA---------------ATTCTACAGGTTCTAAAAATGCTCATCTGCACCAATTCAAAGGTACTGACAACTGAACATAGTCCAGTAATTTTTCTAGAATACTCAGAAAGAGTCCCTTTGACCCATTACTGGTACCAAACCAAGCATGC-AACGGAGGTGATATA----GTATGT-TTGACAGTTTTCTC-TGTTCACCTGAAACCTAAACATCCTTGCAGGACTGGGCATTTTTCAGGCATATCTACTGTTACATAAAATTCACTtcacggaatttcaga--atcagaagaggttcagttcaattatcttatggatgtggaaactgagtctcagaatagttaaatgactgccg-aaagtcacatggcttggtact--------------------gg-ctaaacctacactaaaactctcatctcctattcctag--------------tccacagcagctcctctgtgcct-cccactGAATGCGTGACCACCCAGGTTTCCTTCTATGTATCTGGGCATTATTC-GCTATAGCTCCTTCTGAACGTCCTCAATGAAGTAAACA---AA-------GGCATTGGGCTAGATG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80710939 525 + 95678458 AACCTATAACTTTTACTC-------------------------------CTAAAAATGTCTATCTGCACCAATTCAGAGGTACTGACAACTAAACACAGTCCAGTAATTTTTCTAGAATACTCAGAAAGGGTGCCTTTGACCCATTACTGATACCAAACCAAGCAAGC-AATGGAGGTGATACA---TGTATGT-TTGACAGTTTTCTC-TGTTCACCTG-GACCTAAACATCCTTGTGGAACTGGACATTTTTCAGGCATATCTACTGCTACATAAAATTCACTtcacagaatttcaga--ataagaagaggttcagttcaatcatcttatggatgtggaaactgagtctcaaaatagtcaaatgactgccg-aaagtcacatggcttggtact--------------------gg-ctaaacctccactaaaacgctcatctcctattcctag--------------tccacagcagctcctctgtgcct-cccactGAATGCGTGACCAGCCAGGTTTCCTTCTACGTATCTGGGCATTATTC-GCTATGGCTCCTTCTGCACGTCCTCAATAAAGTAAACA---AA-------GGCACTGGGCTAGATG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81137512 525 - 96509753 AAGCTATAACTTTTACTC-------------------------------CTAAAAATGTCTATCTGCACCAATTCAGAGGTACTGACAACTAAACACAGTCCAGTAATTTTTCTAGAATACTCAGAAAGGGTGCCTTTGACCCATTACTGATACCAAACCAAGCAAGC-AATGGAGGTGATACA---TGTATGT-TTGACAGTTTTCTC-TGTTCACCTG-GACCTAAACATCCTTGTGGAACTGGACATTTTTCAGGCATATCTACTGCTACATAAAATTCACTtcacagaatttcaga--ataagaagaggttcagttcaatcatcttatggatgtggaaactgagtctcaaaatagtcaaatgactgccg-aaagtcacatggcttggtact--------------------gg-ctaaacctccactaaaacgctcatctcctattcctag--------------tccacagcagctcctctgtgcct-cccactGAATGCGTGACCAGCCAGGTTTCCTTCTACGTATCTGGGCATTATTC-GCTATGGCTCCTTCTGCACGTCCTCAATAAAGTAAACA---AA-------GGCACTGGGCTAGATG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76393590 541 + 90941950 AAGCTATAACTTTTACTCTTCA---------------ATTCTACAGGTTCTAAAAATGTCTATCTGCACCAATTCAGAGGTACTGACAACTAAACACAGTCCAGTAATTTTTCTAGAATACTCAGAAAGGGTGCCTTTGACCCATTACTGATACCAAACCAAGCAAGC-AATGGAGGTGATACA---TGTATGT-TTGACAGTTTTCTC-TGTTCACCTG-GACCTAAACATCCTTGTGGAACTGGGCATTTTTCAGGCATATCTACTGCTACATAaaattcacttcacagaatttCAGA--ACAAGAAGAGGTTCAGTTCAATCATCTTATGGAtgtggaaactgagtctcaaaatAGTCAAATGACTGCCG-AAAGTCACATGGCTTGGTACT--------------------GG-CTAAACCTCCACTAAAACGCTCATCTCCTATTCCTAG--------------TCCACAGCAGCTCCTCTGTGCCT-CCCACTGAATGCGTGACCAGCCAGGTTTCCTTCTACGTATCTGGGCATTATTT-GCTATGGCTCCTTCTGCACATCCTCAATGAAGTAAACA---AA-------GGCACTGGGCTAgata i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18662558 541 + 33263144 AAGCTATAACTTTTACTCTTCA---------------ATTCTACAGGTTCTAAAAATGTCTATCTGCACCAATTCAGAGGTACTGACAACTAAACACAGTCCAGTAATTTTTCTAGAATACTCAGAAAGGGTGCCTTTGACCCATTACTGATACCAAACCAAGCAAGC-AATGGAGGTGATACA---TGTATGT-TTGACAGTTTTCTC-TGTTCACCTG-GACCTAAACATCCTTGTGGAACTGGGCATTTTTCAGGCATATCTACCGCTACATAAAATTCACTtcacagaatttcaga--ataagaagaggttcagttcaatcatcttatggatgtggaaactgagtctcaaaatagtcaaatgactgccg-aaagtcacatggcttggtact--------------------gg-ctaaacctccactgaaacgctcatctcctattcctag--------------tccacagcagctcctctgtgcct-cccactGAATGTGTGACCAGCCAGGTTTCCTTCTACGTATCTGGGCATTATTC-GCTATGGCTCCTTCTGCACGTCCTCAATGAAGTAAACA---AA-------GGCACTGGGCTAGATG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198370661 541 + 210400635 AAGTTATAACTTTTACTCTTCA---------------ATTCTACAGGTTCTAAAAATGTCCATCTGCATCAATTCAGAGGTACTGACAACTGAACATCGTTCAGTAATTTTTCTAGAATACTCAGAAAGAATGCCTCTGACCCATTACTGGTACCAAACCAAACGTGC-AATGGAGGTGATATA---TGTATGT-ATGACGGTTTTCTC-TGTTTGCCTG-GACCTAAACATCCTTGCAGAATTGGGTATCTTCCAGGCATATCTACTGC----TAAAATTCACTtcacagaatttcaga--atcagaagaggttcagttcaattatcttacggatgtggaaactgactctcagaacagttaaatgactgctg-aaagtcaaacggcttggtacg--------------------gg-ctaaacctacactaaaactcccatctcttatttctag--------------tccacagcagctcctctgTGCCT-CGCACTAAATGCTTGACCACCTAGGTTTTCTTCTACGGATCTGGGTAT--TCA-GCTATAGCTCC-TCTGCACATCCTCGATGAAGTAAACA---AAGGTGTGGGGCACTGGGCTAGATG i calJac3.chr1 I 307 C 0 s mm10.chr15 77200790 471 + 104043685 GCTTTGAAACCTTTACCTTTCA-----------------TCTACAGGTTAGATGAATGTCCA---GCACC-TCTCAGAGGTACTGACAACTGAACCTAATGTAATACT---------------AGAAACAGTGCTGCTGACATATTACTAACCCTGAATCAAGCAGACGGGTGGAAATAACATGTGTTGTATATCTTCATAGCGTTCTC-AA---------AATCTCAAAATTCT--CAAAAGCAGG------------------------------------------GGCATTCCAGA--------------TCAGCCCTACTGTCTCATGAGTATGGAAGCTGAGGTATACAACAGTTGAAGGATTATCC-ACAGTCATGGGAGCTGGTATTCAGTGACTACTGGTGGTCCAGG-CTAACCCTAGAGTAGAGCTTGGATCTTTCCCCCAT-------------------ACAGCAGC----CAGGGATT-TCTGCTTAACCCTTGACTACACAGATAACCTCCTTAACATTCAGGTTTGTGCA-GGTGTGG----TTCTGCTGGGTGTCTATGGGCTAGACAATGAA-------GACAGTAAGGTAAATG i mm10.chr15 C 0 I 551 s canFam3.chr10 40983480 540 - 69331447 GAGCTCTAACTTTTAGTCCTCAGAATCTTCAGAAACTATTCTTCAGGTTCTAAGGATGTCCAT----ACC-ACTCAGAGGAACTGACAAC--AACACTGTTGAGTAATTCTTCTAGAACCCTGAGAAACAGTACCTGTAACTCACTGCTGGTATCAAACCAAGCAGGC-AGAAGAGATGAT--------TATGT-TGCACAGCTTTCTCGTGCTTACGAG-GACCCAAATGTTCTTACACAACTGGGTGTCCTTCTGGCATATGTACTGCTACATAAA------TTCACACAGACCCAGGGCATTagaagag-----gttctattatcttatggacgtagaaagtgaggctcaaacaag------gattgccc-aacatcacatggatgggcact--------------------ggcctagacc-------aaactctgatctcccattccttggtcagtaaattttccccactgtacctcctcaatgcttccccACATCTTACACAACCACCGAGCTGTCCTC---TATATCTGGGTGTTATGCAGCTCTGGCTCCTTCTGGACATTTTCACTGAATTCAATG---TG----TTGGGCACTGGGAGAGATG i canFam3.chr10 C 0 C 0 a score=324572.000000 s hg38.chr22_KI270876v1_alt 214045 96 + 263666 ACACAAATAATA---AAAG--AGATAGAGCTGACCTGCTTTTTGCCCTCTAGGcagtgctacccaagccttcaggtgtcatggcatacataggaa------ata-ttt s panTro4.chr22 34593599 96 + 49737984 ACACAAATAATA---AAAG--AGATAGAGCTGACCTGCTTTTTGCCCTCTAGGcagtgctacccaagccttcaggtgtcatggcatacataggaa------ata-ttt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31013619 96 + 46535552 ACACAAATAATA---AAAG--AGATAGAGCTAACCTGC-TTTTGCCCTCTAGGcagtgctacccaagccttcaggtgtcatggcatacataggaa------atatttt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100567172 97 - 115148730 ACACAAATAATA---AAAG--AGATAGAGCTGACCTGCTTTTTGCCCTCTAGGcagtgctacccaagccttcaggtgtcatggcatacataggaa------atatttt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80711464 97 + 95678458 AGACAAATAGTA---AAAG--AGATAGAGCTGACCTGCTTTTTGCCCTCTAGGcagtgctacccaagccttcaggtgtcatggcacacataggaa------atatttt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81138037 97 - 96509753 AGACAAATAGTA---AAAG--AGATAGAGCTGACCTGCTTTTTGCCCTCTAGGcagtgctacccaagccttcaggtgtcatggcacacataggaa------atatttt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76394131 97 + 90941950 acacaaataata---aaag--agataGAGCTGACCTGCTTTTTGCCCTCTAGGCAGTGCTACCCAAGCCTTCAGGTGTCATGGCACacacaggaa------atatttt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18663099 97 + 33263144 ACACAAATAATA---AAAG--AGAGAGAGCTGACCTGCTTTTTGCCCTCTAGGcagtgctacccaagccttcaggtgtcatggcacacataggaa------atatttt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198371202 99 + 210400635 ATACAAATAATA---AAAGAAAGAGAGAGCCGACCTGCTTTTTGCCCTTTAGGcagtgctacccaaaccttcaggtgtcatggcacacacaggaa------ataccgt i calJac3.chr1 C 0 C 0 s canFam3.chr10 40984020 104 - 69331447 ATGCAGATAAGAATTAAAG--AGAGAGGGGTGACACACATCTTGCCCTTTGGAcagtgctactcaaa-tttcaggtgtcatggttcatatagacaattgttatattt- i canFam3.chr10 C 0 C 0 e mm10.chr15 77201261 551 + 104043685 I a score=10049577.000000 s hg38.chr22_KI270876v1_alt 214141 2591 + 263666 ttatagcacaaagtggtaa--acaaattagggtgcacatgatcaaagtgaccaggggactcccaagccccagctggctgctccaagggttgtggggtatagtaatcttggcatatttctatc-tcaatctggcatgtagca--t--tggtagggaagctctgTTCCAGGGTTAATAAGTAAAAAAAAAAATTGAGATAAATACACAAGTAACTGTAACATAAGCACAAAGGAAATAACTAAGGAGACTGTCACTGTCTGCTTTCATCAAACATAAGTGAGTGAAAATGAGATTAATTCAACTTGCTTCCTTTCATAACTCCTCTTCCAAACAAATCAAAAGACAGAACAGCCCATCCTTCA---GGTCAACAG--GGCT--GATCAATC--CCACCCACAAGGCTGCAAAGAGCCTGCACAGATGACTAGTTTAC----AGGGAGGCGAAAACTACTTAATGCACAT-TAGTGTGTCAGAAAAGT-TCTGAGCTCTTACAAA-----TACTACAA----AAA-AA-ATCAATAGAGAAGAGAAAATAATATTTCAAGGTCATATTTAAACATGAAGGGAGAAGCACGAAAAGCAG-CCCCTCCGAACATACAC----------ACATACATATACAT-------CTTCTGTGAACAAGCTCCATCTCTGCAAACGCAGTTAACAT-T-TGCTTTCTGATAATTTATAAATTTAGCCTGTGTTAGCCAAGTAGGTTCCTGCAATTCCAGACATCTGGGCTGAAGGGCAAAGGGCAAAGGGAAACTTTCAAAAAGCTGGTTAGTAGCCAAGAGCATCACATCTAGTAGGCTCCCTTAGCAACACACAACAGCTGTTTGCTCAAGAGA-CATACTGCCATCTTTGCAACGGACTGTAAGATGTTCTTGTCTTAACAACTAAAAATTGCAGGC-GGCTTGGGGGAGCA--GTTTCTCTATTATTTCCCCTGACATTTCTCTAAAAGTTATCACATTTCATAATTTACAAACTTCTCCAGTCCCAGAAAGTTTCTCTCCATCCCAAACTACAATGCTACTATTGACGGTAAATTACAGTAATAGAAGGTAC----TACATTCCTG----GCAAATATAAAATGCTTTATAATGTCTCATTATTAATTACTATTCTAActgctatagacttgatttctaactacgggcaagtcactctttgtggcttaattactttcctcacacaattttaataacagtagtgagtgacctatttcacaagactattgtgaaggatagtaaaaattattagataaaagcTTATGAAAGCTTATTCCTAATTAATAATCATGCCGCCTATTGGCTCTCAATATCTAAAGACATGGC----TTAACAAGGTCAGTACCCCCAAAACAAAACACAAGTCGATCCTGAGCCACCAGGAAGACTGCAGTTCCTGAAGCAACCAGCTCACAACTTCACCTGCCCCACTTGCCTTCTCCAAACCTACCAAGCCCAGGGGATGGTACTGCGCAGGGAGTTCAGCCCTTGCGCCTAAGTCTGACAAGATAAACAACAT---AGGGGGAGGAAAAAAAA------------CAATGTCACAATCAC-CGCTAGGTTTTAAAAACCTAACACCTTGGAACAGAAGGGGATGTGGCAGTCTGTGCTCTGTG-GGGAGGCCATTTGTGCAACAGCAGAACCTCGCAGCTTTCCACTCCTTATATGTGCAAGTGCAAACCCTCACCCACAGCACTCTGTACTCACCCAGAGGTACATCATGTCAGATCGGGCTGCT-CAAACTCAGCGGTCAGTGGATCCTGGACTGC-AAAAAGGCACTTCAGTGAACCACAGGAAAGAAGATGCCAAAACTGGGG--------G-----------GCAAGAGTTTGAGGTGGGGAGAAA-CCCCCCAAAATCACTTGAGTT--AAAAAATCCTaaaaaaaaaaaaaagaaaaGACTGGTCT-------CCTCCCCCCTCCGCTCCAGCTGACTGTTCTGTTGTtctctctcct-ccctctcaccctccctccgtccctcc--------------------------------------------ctctctctctctctctttctctctctctctctGGGAGTTCCCAGCTCTGAGTATCTGAACTAGAGTGTACAGCACACTCTCTCTGTATTTGCCTTCAGGGAATCTCTCTCTGCAATTCTACTTCTAGAAACACAATCACCACTCACAAAGATTATTGCAAAAGACAGGGATGGGTGGGGTCAGTAATAAACCACCAGCACCAGTTTCTAGTGCTAGATATACATTAGTTTAAGATGAGTTCTTTAAACATGAATGAAGCAATCAAAAA-TCTCTGCCCTCTAAGATCAAGGCAAG-TGAGCCAAGCT---TTCCCTCTGCCCCA--ATTGTG--GAGCCCCTTGCAGAAGCCAAGCACACACACAGAACCTGCTCAGAGCCCACATTCCTTTCTCACAATGTGTGCTTGACACCACTATTCTTTACGTCATTTCACCACTAATAATTCTT-AATCTTGCAAGATTTCAAAACA-CAGGAAAACTTAAGATATAAAACTGAATAGGCTTTTCATCTTTTTTA-TTACTACTGCC----CTAGTTCACA-TCAACATAGCCTGGCTTCTGAA------------------------GGAGTCAAGTGGATCATGAGCTCGTAGCATGGTACAGACACTTTACTCACCACGCAGacgggctaaggtgca-------cggct--------tgggtttcaa---ttctagatctacaagta s panTro4.chr22 34593695 2586 + 49737984 ttatagcacaaagtggtaa--acaaattagggtgcacatgatcaaagtgaccaggggactcccaagccccagctggctgctccaagggttgtggggtatagtaatcttggcacatttctatc-tcaatctggcatgtagca--t--tggtagggaagctctgTTCCAGGGTTAATAAGTAAAAAAAAAA-TTGAGATAAATACACAAGCAACTATAACATAAGCACAAAGGAAATAACTAAGGAGACTGTCACTGTCTGCTTTCATCAAACATAAGTGAGTGAAAATGAGATTAATTCAACTTGCTTCCTTTCATAACTCCTCTTCCAAACAAATCAAAAGACAGAACAGCCCATCCTTCA---GGTCAACAG--GGCT--GATCAATC--CCACCCACAAGGCTGCAAAGAGCCCACACAGATGACTAGTTTAC----AGGGAGGCGAAAACTACTTAATGCACAT-TAGTGTGTCAGAAAAGT-TCTGAGCTCTTACAAA-----TACTACAA----AAA-AA--TCAATAGAGAAGAGAAAATAATATTTCAAGGTCATATTTAAACATGAAGGGAGAAGCACGAAAAGCAG-CCCCTCCGAACATACAC----------ACATACATATACAT-------CTTCTGTGAACAAGCTCCATCTCTGCAAACGCAGTTAACAT-T-TGCTTTCTGATAATTTATAAATTTAGCCTGTGTTAGCCAAGTAGGTTCCTGCAATTCCAGACATCTGGGCTGAAGGGCAAAGGGCAAAGGGAAACTTTCAAAAAGCTGGTTAGTAGCCAAGAGCATCACATCTAGTAGGCTCCCTTAGCAACACACAACAGCTGTTTGCTCAAGAGA-CATACTGCCATCTTTGCAACGGACTGTAAGACGTTCTTGTCTTAACAACTAAAAATTGCAGGC-GGCTTGGGGGAGCA--GTTTCTCTATTATTTCCCCTGACATTTCTCTAAAAGTTATCACATTTCATAATTCACAAACTTCTCCAGTCCCAGAAAGTTTTCCTCCATCCCAAACTACAATGCTACTATTGACGGTAAATTACAGTAATAGAAGGTAC----TACATTCCTG----GCAAATATAAAATGCTTTATAATGTCTCATTATTAATTACTATTCTAActgctatagacttgatttctaactacgggcaagtcactctttgtggcttaattactttcctcatacaattttaataacagtagtgagtgacctatttcacaagactattgtgaaggatagtaaaaattattagataaaagcTTATGAAAGCTTATTCCTAATTAATAATCATGCCGCCTATTGGCTCTCAATATCTAAAGAAATGGC----TTAACAAGGTCAGTACCCCCAAAACAAAACACAAGTCAATCCTGAGCCACCAGGAAGACTGCAGTT-CTGAAGCAACCAGCTCACAACTTCACCTGCCCCACTTGCCTTCTCCAAACCTACCAAGCCCAGGGGATGGTACTGCGCAGGGAGTTCAGCCCTTGCGCCTAAGTCTGACAAGATAAACAACAT---AGGGGGAGGAAAAAAAA------------CAATGTCACAATCAC-TGCTAGGTTTTAAAAACCTAACACCTTGGAACAGAAGGGGATGTGGCAGTCTGTGCTCTGTG-GGGAGGCCATTTGTGCAACAGCAGAACCTCGCAGCTTTCCACTCCTTATATGTGCAAGTGCAAACCCTCACCCACAGCACTCTGTACTCACCCAGAGGTACATCATGTCAGATCGGGCTGCT-CAAACTCAGCGGTCAGTGGATCCTGGACTGC-AAAAAGGCACTTCAGTGAACCACAGGAAAGAAGATGTCAAAACTGGGG--------G-----------GCAAGGGTTTGAGGTGGGGAGAAA-CCCCCCAAAATCACTTGAGTT--AAAAAATCCT--AAAAAAAAAAAAGAAAAGACTGGTCT-------CCTCCCCCCTCCGCTCCAGCTGACTGTTCTGTTGTtctctctcct-ccctctcaccctccctccgtccctcc--------------------------------------------ctctctctctctctctttctctctctctctctGGGAGTTCCCAGCTCTGAGTATCTGAACTAGAGTGTACAGCACACTCTCTCTGTATTTGCCTTCAGGGAATCTCTCTCTGCAATTCTACTTCTAGAAACACAATCACCACTCACAAAGATTATTGCAAAAGACAGGGATGGGTGGGGTCAGTAATAAACCACCAGCACCAGTTTCTAGTGCTAGATATACATTAGTTTAAGATGAGTTCTTTAAACATGAATGAAGCAATCAAAAA-TCTCTGCCCTCTAAGATCAAGGCAAG-TGAGCCAAGCT---TTCCCTCTGCCCCA--ATTGTG--GAGCCCCTTGCAGAAGCCAAGCACGCACACAGAACCTGCTCAGAGCCCACATTCCTTTCTCACAATGTCTGCTTGACACCACTATTCTTTACGTCATTTCACCACTAATAATTCTT-AATCTTGCAAGATTTTAAAACA-CAGGAAAACTTAAGATATAAAACTGAATAGGCTTTTCATCTTTTTTA-TTACTACTGCC----CTAGTTCACA-TCAACATAGCCTGGCTTCTGAA------------------------GGAGTCAAGTGGATCATGAGCTCGTAGCATGGTACAGACACTTTACTCACCACGCAGacgggctaaggtgca-------cggct--------tgggtttcaa---ttctagatctacaagta i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31013715 2598 + 46535552 ttatagcacaaagtggtaa--acaaattagggtgcacatgatcaaagtgaccaggggactcccaagccccagctggctgctccaagggttgtggggtatagtaatcttggcatatttttatc-tcaatctggcatgtggca--c--tggtagggaagctctgTTCCGGGGTTAATAAGTAAAAAAAAAT-TTGAGATAAATACACAAGCAACTGTAATATAAGCACAAAGGAAATAACTAAGGAGACTGTCACTGTCTGCTTTCATCAAACATAAGTGAGTGAAAATGAGATTAATTCAACTTGCTTCCTTTCATAACTCCTCTTCCAAACAAATCAAAAGACAGAACAGCCCATCCTTCA---GGTCAACAG--GGCT--GATCAATC--CCACCCACAAGGCTGCAAAGAGCCTGCACAGATGACTAGTTTAC----AGGGAGGCGAGAACTACTTAATGCACAT-TAGTGTGTCACAAAAGT-TCTGAGCTCTTACAAA-----TACTACAA----AAA-AA-ATCAGTAGAGGAGAGAAAATAATATTTCAAGGTCATATTCAAACATGAAGCCAGAAGCACGAAAAGCAG-CCCCTCCGAACATACAC----------ACATACATATACA----------TCTGTGAACAAGCTCCATCTCTGCAAACGCAGTTAAAAT-T-TGCTTTCTGATAATTTATAAATTTAGCCTGTGTTAGCCAAGTAGGTTCCTGCAATTCCAGACATCTGGGCTGAAGGGCAAAGGGCAAAGGGAAACTTTCAAAAAGCTGGTTAGTAGCCAAGAGCATCACATCTAGTAGGCTCCCTTAGCAACACACAACAGCTGTTTGCTCAAGAGA-CACACTGCCATCTTTGCAACGGACTGTAAGATGTTCTTGTCTTAACAACCAAAAATTGCAGGC-GGGTTGGGGGAGCA--GTTTCTCTATTATTTCCCCTGACATTTCTCTAAAAGTTATCACATTTCATAATTTACAAACTTCTCCAGTCCCAGAAAGTTTTCCTCCATCCCAAACTACAATGCTACTATTGACGGTAAATTACAATAATAGAAGGTAC----TAGAGTCCTG----GCAAATATAAAACGCTTTATAATGTCTCATTATTAATTACTATTCTAActgctatagacttgatttctaactatgggcaagtcactctttgtggcttaattactttcctcatacaattttaataacagtagtgagtgacctatttcacaagactattgtgaaggatagtaaaaattatcagataaaagcTTATGAAAGCTTATTCCTAATTAACAATCATGCCGCCTATTGGCTCTCAATATCTAAAGACATGGC----CTATCAAGGTCAGTGCCCCCAAAACAAAACACAAGTCGCTCCTGAGCCACCAGGGAGACTGCAGTTCCTGAAGCAACCAGCTCAC-ACTTCACCTGCCCCACTTGCCGTCTCCAAACCTACCAAGCCCAGGGGACGGTACTGCGCAGGGAGTTCAGCCCTTGCACCTAAGTCTGACAAGATAAACAACAT---AGGGGGAG---AAAAAA------------CAATGTCACAATCAC-TGCTAGGTTTTAAAAACCTAACACCTTGGAACAGAAGGGGATGTGGCAGTCTGTGCTCTGTG-GGGAGGCCATTTGTGCAACAGCAGAACCTCGCAGCTTTCCACTCCTTATATGTGCAAGTGCAAACCCTCACCCACAGCACTCTGTACTCACCCAGAGGTACATCATGTCAGATCGGGCTGCT-CAAACTCAGCGGTCAGTGGATCCTGGACTGC-AAAAAGGCACTTCAGTGAACCGCAGGAAAGAAGATGCCAGAACTGGGG--------G-----------GCAAGGGTTTGAGGTGGGGAGAAA-CCCCCCAAAATCACTTGAGTT--AAAAAATCCT-----AAAAAAAAAGAAAAGACTGGTCT-------CCTCCCCCCTCCTCTCCAGCTGACTGTTCTGTTGTtctctctcct-ccctctcaccctcccttcgtccctcc--------ctctctctctcc------------c----tttctctctctctctctctctctctctctctctctctctGGGAGTTCCCAGCCCTGAGTATCTGAACTAGAGTGTACAGCACACTCTCTCTGTATTTGCCTTCAGGGAATCTCTCTCTGCAATTCTACTTCTAGAAACACAATCACCACTCACAAAGATTATTGCAAAAGACAGGGATGGGTGGGGTCAGTAATAAACCACCAGCACCAGTTTCTAGTGCTAGATATACATTAGTTTAAGATGAGTTCTTTAAACATGAATGAAGCAATCGAAAA-TCTCTGCCCTCTAAGATCAAGGCGAG-TGAGCCAAGCT---TTCCCTCTGCCCCA--ATTGTG--GAGCCCCTTGCAGAAGCCAAGCACGCACACAGAACCTGCTCAGGGCCCACATTCCTTTCTCACAATGTCTGCTTGACACCACTATTCTTTATGTCATTTCACCACTAATAATTCTT-AATCTTACAAGATTTTAAAACA-CAGGAAAACTTAAGATATAAAACTGAACAGGCTTTTCATCTTTTTCA-TTACTACTGCC----CCAGTTCAGA-TCAACACAGCCTGGCTTCTGAA------------------------GGAGTCAAGTGGATCATGAGCTCATAGCATGGTACAGACACTTTACTCACCACGCAGACAGGCTAAGGTgca-------cggcc--------tgggtttcaa---ttctagatctacaagta i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100567269 2578 - 115148730 ttatagcacaaagtggtaa--acaaattagggtgcacatgatcaaagtgaccaggggactcccaagccccagCTGGCTGCTCCAAGGGTTGTGGGGTACAGTAATCTTGGCATATTTTTATC-TCAATCTGGCATGTGGCA--T--TGGTAGGGAGGCTCTGTTCTGGGGTTAATAAGTAAAAAAAAT--TTGAGATAAATACACAAGTAACTGTAATATAAGCACAAAGGAAATAACTAAGGAGACTGTCACTGTCTGCTTTCATCAAACATAAGTGAGTGAAAATGAGATTAATTCAACTTGCTTCCTTTCATAACTCCTCTTCCAAACAAATCAAAAGACAGAACAACCCATCCTTCA---GGTCAACAG--GGCT--GATCAGTC--CCACCCACAAGGCTGCAAAGAGCCTGCACAGATGACCAGTTTAC----AGGGAGGCGAAAACTCCTTAATGCACAT-TAGTGTGTCAGAAAAGT-TCTGAGCTCTTACAAA-----TACTATAA----AAA-AA-ATCAATAGAGGAGAGAAAATAATATTTCAAGATCATATTCAAACATGAAGGGAAATGCACGAAAAGCAG-CCCCTCTGAACATATAC----------ACATACATATACAT-------CTTCTGTGAACAAGCTTCACCTCTGCAAACGCAGTTAAAAT-T-TGCTTTCTGATAATTTATAAATTTAGCCTGCGTTAGCCAAGTAGGTTCCTGCAATTCCAGACATCTGGGCTGAAGGGCAAAGGGCAAAGGGAAACTTTCAAAAAGCTGGCTAGTAGCCAAGGGCATCACATCTAGTAGGCTCCCTTAGCAACACACAACAGCTGTTTGCTCAAGAGA-CATACTGCCATCTTTGCAACGGACTATAAGATGTTCTTGTCTTAACAACTAAAAATTGCGGGT-GGGTTGGGGGAGCA--GTTTCTCTATTATTTCCCCTGACATTTCTCTAAAAGTTATCACATTTCATAATTTACAAACTTCTCCAGTCCCAGAAAGTTTTCCTCCATCCCAAACTACAATGCTACTATTGACGGTAAATTACAATAATAGAAGGTAC----TACATTCCTG----GCAAATATAAAATGCTTTATAATGTCTGATTATTAATTACTATTCTAActgctatagacttgatttctaactatgggcaagtcactctttgtaacttaattactttcctcatacaattttaataacagtagtgagtgacctacttcacaagactattgtgaaggatagtaaaaattattagataaaagcTTATGAAAGCTTATTCCTAATTAATGATCATGTCGCCTATTGGCTCTCAATATCTAAAGACATGGC----TTATCAAGGTCAGTACCCCCAAAACAAAACACAAGTCGATCCTGAGCCACCAGGAAGACTGCAGTCCCTGAAGCAACCAGCTC---ACTTCACCTGCCCCACTTGCCTTCTCCAAACCTACCAAGCCCAGGGGATGGTACTGTGCAGGGAGTTCAGCCCTTGCACCTAAGTCTGACAAGATAAACAACAT---AGGGGGAGGA-AAAAAA------------CAATGTCACAATCAC-TGCTAGGTTTTAAAAACCTAACACCTTGGAACAGAAGGGGATGTGGCAGTCTGTGCTCTGTG-GGGAGGCCATTTGTGCAACAGCAGAACCTTGCAGCTTTCCACTCCTTATATGTGCAAGTGCAAACCCTCACCCACAGCACTCTGTACTCACCCAGAGGTACATCATGTCAGATCGGGCTGCT-CAAACTCAGCGGTCAGTGGATCCTGGACTGC-AAAAAGGCACTTCAGTGAACCGTAGGAAAGAAGATGCCAGAACAGGGG--------G-----------GCAAGGGTTTGAGGTGGGGAGAAA-CCCCCCAAAATCACTGGAGTT--AAAAAATCCT-AAAAAAAAAAACAGAAAAGACTGGTCT-------CCTCCCCCCTCTTCTCCAGCTGACTGTTCTGTTGTTctctctcct-ccctctcaccctccctccgtccctcc--------------------------------------------------ctctctctctctctctctctctctctGGGAGTTCCCAGCCCTGAGTATCTGAACTAGAGTGTGCAGCACACTCTCTTTGTATTTGCCTTCAGGGACTCTCTCTCTATAATTCTACTTCTAGAAACACAATCACCACTCACAAAGATTATTGCAAAAGACAGGGATGGGTGGGGTCAGTAATAAACCACCAGCACCAGTTTCTAGTGCTAGATATACATTAGTTTAAGATGAGTTCTTTAAACATGAATGAAGCAATCAAAAA-TCTCTGCCCTCTAAGATCAAGGCGAG-TGAGCCAAGCT---TTCCCTCTGCCCCA--ATTGTG--GAGCCCCTTGCAGAAGCCAAGCACGCACACAGAACCTGCTCAGAGCCCGCATTCCTTTCTCACAATGTCTGCTTGACACCACTATTCTTTATGTCATTTCACCACTAATAATTCTT-AATCTTACAAGATTTTAAAACA-CAGGAAAACTTAAGATATAAAACTGAATAGGCTTTTCATCTTTTTTA-TTACTACTGCC----CTAGTTCAGA-ACAACATAGCCTGGCTTCTGAA------------------------GGAGTCAAGTGGATCACGAGCTCCTAGCATGGTACAGACACTTTACTCACCATGCAGACAGGCTAAGGTgca-------cggcc--------tgggtttcaa---ttctagatctacaagta i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80711561 2621 + 95678458 ttatagcacaaagtggtaa--acaaattagggagaacatgatcaaagtgaccaggggattcccaagccccagctggctgctccaagggttgtggggtatagtaatcttggcatatttttatc-tcaatctggcatcaggcc-----------agaagctctATTCCAGGGTTAATAAGTAAAAAATCAA-TTGAGATAAATATACAAATAACTGTAACGTAAACACAAAGGAAATAACTAAGGAGACTGTCACTGTCTGCTTTCATCAAACGTAAGTGAGTGAAAATGAGATTAATTCAACTTGCTTCCTTTCATAACTCCTCTTCCAAACAAATCAAAAGACAGAACAGCCCATCCTTCA---GGTCAACAG--GGCT--GATCAATC--CCACCCACAAGGCTGCAAAGAGCCTGCACAGATGACTAGTTTAC----AGGGAGGCAAAAACTACTCAATGCACAT-TAGTGTGTCAGAAAAGT-TCCGAGCTCTTACAAA-----GACTACAC----AAA-AA-ATCAATAGAGGAGAGAAAATAATATTTCAAGGTCATATTCAAACATGAAGGGAGAAGCACGAAAAGCAG-CCCCTCCCAACACACAC--------ATATATACATATACGT-------CTTCTGTGAACAAGCTCCATCTCTCCAAACGCAGTTAAAAT-T-TGCTTTCTGATAATTTATAAATTTAGCCTGCGTTAGCCAAGTAGGTTCCTGCAATTCCAGACATCTGGGCTGAAGGGCAAAGGGCAAAGGGAAACTTTCAAAAAGCTGGCTAGTAGCCAAGGGCATCACATCTAGTAGGCTCCCTTAGCAACACACAACAGCTGTTTGCTCGAGAGA-CATACTGCCATCTTTGCAATGGACTATAAGATGTTCTTGTCTTAACAACTAAAAATTGCAGGC-GGGTGCGGGGAGCA--GTTTCTGTATTATTTCCTCTGACATTCCTCTAAAAGTTGTCACATATCATAATTTACAAACTTCTCCAGTTCTAGAAAGTTTTCCTCCATCCCAAACTACAATGCTACAATTAATGGTAAATTACAATAATAGAAGGTAC----TACATTCCTG----GCAAACATAAAATGCTTTATAATGTCTGATTATTAATTACTATTCTAActgctatagacttgatttctaactataggcaagtcactctttgtgacttaattactttcctcatacaattttaataacagtagtgagtgacctacttcacaagactactgtgaaggatagtaataattaatagataaaagcTTATGAAAGCTTATTCCTAATTAATAATCATGCCACCTATTGGCTCTCAATATCTAAAGACATGGC----TTATGAAGGTCAGTACCCCCAAAACAAAACACAAGTCGATCCTGAGCCACCAGGAAGACTGCAGTTCCTGAAGCAACCAGCTC---ACTTCACCTGCCCCACTTGCCTTCTCTAAACCTACCAAGCCCACGGGATGGTACTGTGCAGGGAGTTCAGCCCTTGCACCTAAGTCTGACAAGATAAATAACAT---AGGGGGAGGA-AATAAA------------CAATGTCACAATCAC-TGCTAGGTTTTAAAAACCTAACACCTTGGAACAGAAGGGGATGTGGCAGTCTGTGTTCTATG-GGGAGGCCATTTGTGCAACAGCAGAACCTCGCAGCTTTCCACTCCTTATATGTGCAAGTGCAAACCCTCACCCACAGCACTCTGTACTCACCCAGAGGTACATCATGTCAGATCGGGCTGCT-CAAACTCAGCGGTCAGTGGATCCTGGACTGCAAAAAAGGCACTTCAGCGAACCGTAGGAAAGAAGATGCCAGAACTGGGG--------G-----------GCAAGGGTTTGAGGTGGGGAGAAA-CCCCCCAAAATCACTTGAGTT--AAAAAATCCT---AAAAAAAAAAAAAAAAGACTGGTCT-------CCTCCCCCCTCCTCTCCAGCTGACTGTTCTGTTGTtctctctcct-ccctctcaccctccctccgtccctccgtccctccctctctctctccctctctctctgtt--tctctctctctctctctctctctctctctctctctctctctGGGAGTTCCCAGCCCTGAGTATCTGAACTAGAGTGTACAGCACACTCGCTCTGTATTTGCCTTCAGGGAATCTCTCTCTGTAATTCTACTTCTAGAAACACAATCACCACTCACAAAGATTATTGCAAAAGACAGGGATGGGTGGGGTCAGTTATAAACCACCAGCACCAGTTTCTAGTGCTAGATATACATTAGTTTAAGATGAGTTCTTTAAACATGAATGAAGCAATCAAAAA-TCTCTGCCCTCTAAGATCCAGGTGAG-TGAGCCAAGCT---TTCCCTCTGCCCCA--ACTGTG--GAGCCCCTTGCAGAAGCCAAGCACACACACAGAACCTGCTCAGAGCCCACATTCCTTTCTCACAATGTCTGCTGGACACCACTATTCTTTATGTCATTTCACCACTAATAATTCTT-AATCTTACAAGATTTTAAAACA-CAAGAAAACTTAAGATATAAAACTGAATAGGCTTTTCATCTTTTTTA-TTACTACTGCC----CTAGTTCAGA-TCAACATAGCCGGGCTTCTGAA------------------------AGAGTCAAGTGGATCATGAGCTCCTAGCATGGTACAGACACTTTACTCACCACGTAGGCAGGCTAAGGTgca-------cggcc--------tgggtgtcaa---ttctagatctacaagta i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81138134 2617 - 96509753 ttatagcacaaagtggtaa--acaaattagggagaacatgatcaaagtgaccaggggattcccaagccccagctggctgctccaagggttgtggggtatagtaatcttggcatatttttatc-tcaatctggcatcaggcc-----------agaagctctATTCCGGGGTTAATAAGTAAAAAATCAA-TTGAGATAAATATACAAATAACTGTAACGTAAACACAAAGGAAATAACTAAGGAGACTGTCACTGTCTGCTTTCATCAAACATAAGTGAGTGAAAATGAGATTAATTCAACTTGCTTCCTTTCATAACTCCTCTTCCAAACAAATCAAAAGACAGAACAGCCCATCCTTCA---GGTCAACAG--GGCT--GATCAATC--CCACCCACAAGGCTGCAAAGAGCCTGCACAGATGACTAGTTTAC----AGGGAGGCAAAAACTACTCAATGCACAT-TAGTGTGTCAGAAAAGT-TCCGAGCTCTTACAAA-----GACTACAC----AAA-AA-ATCAATAGAGGAGAGAAAATAATATTTCAAGGTCATATTCAAACATGAAGGGAGAAGCACGAAAAGCAG-CCCCTCCCAACACACAC--------ATATATACATATACGT-------CTTCTGTGAACAAGCTCCATCTCTCCAAACGCAGTTAAAAT-T-TGCTTTCTGATAATTTATAAATTTAGCCTGCGTTAGCCAAGTAGGTTCCTGCAATTCCAGACATCTGGGCTGAAGGGCAAAGGGCAAAGGGAAACTTTCAAAAAGCTGGCTAGTAGCCAAGGGCATCACATCTAGTAGGCTCCCTTAGCAACACACAACAGCTGTTTGCTCGAGAGA-CATACTGCCATCTTTGCAATGGACTATAAGATGTTCTTGTCTTAACAACTAAAAATTGCAGGC-GGGTGCGGGGAGCA--GTTTCTGTATTATTTCCTCTGACATTCCTCTAAAAGTTGTCACATATCATAATTTACAAACTTCTCCAGTTCTAGAAAGTTTTCCTCCATCCCAAACTACAATGCTACAATTAATGGTAAATTACAATAATAGAAGGTAC----TACATTCCTG----GCAAACATAAAATGCTTTATAATGTCTGATTATTAATTACTATTCTAActgctatagacttgatttctaactatgggcaagtcactctttgtgacttaattactttcctcatacaattttaataacagtagtgagtgacctacttcacaagactactgtgaaggatagtaataattaatagataaaagcTTATGAAAGCTTATTCCTAATTAATAATCATGCCACCTATTGGCTCTCAATATCTAAAGACATGGC----TTATGAAGGTCAGTACCCCCAAAACAAAACACAAGTCGATCCTGAGCCACCAGGAAGACTGCAGTTCCTGAAGCAACCAGCTC---ACTTCACCTGCCCCACTTGCCTTCTCTAAACCTACCAAGCCCAGGGGATGGTACTGTGCAGGGAGTTCAGCCCTTGCACCTAAGTCTGACAAGATAAATAACAC---AGGGGGAGGA-AATAAA------------CAATGTCACAATCAC-TGCTAGGTTTTAAAAACCTAACACCTTGGAACAGAAGGGGATGTGGCAGTCTGTGCTCTATG-GGGAGGCCATTTGTGCAACAGCAGAACCTCGCAGCTTTCCACTCCTTATATGTGCAAGTGCAAACCCTCACCCACAGCACTCTGTACTCACCCAGAGGTACATCATGTCAGATCGGGCTGCT-CAAACTCAGCGGTCAGTGGATCCTGGACTGC-AAAAAGGCACTTCAGCGAACCGTAGGAAAGAAGATGCCAGAACTGGGG--------G-----------GCAAGGGTTTGAGGTGGGGAGAAA-CCCCCCAAAATCACTTGAGTT--AAAAAATCCT----AAAAAAAAAAAAAAAGACTGGTCT-------CCTCCCCCCTCCTTTCCAGCTGACTGTTCTGTTGTtctctctcct-ccctctcaccctccctccgtccctccgtccctccctctctctctccctctctctctgtt----tctctctctctctctctctctctctctctctctctctctGGGAGTTCCCAGCCCTGAGTATCTGAACTAGAGTGTACAGCACACTCGCTCTGTATTTGCCTTCAGGGAATCTCTCTCTGTAATTCTACTTCTAGAAACACAATCACCACTCACAAAGATTATTGCAAAAGACAGGGATGGGTGGGGTCAGTTATAAACCACCAGCACCAGTTTCTAGTGCTAGATATACATTAGTTTAAGATGAGTTCTTTAAACATGAATGAAGCAATCAAAAA-TCTCTGCCCTCTAAGATCCAGGTGAG-TGAGCCAAGCT---TTCCCTCTGCCCCA--ACTGTG--GAGCCCCTTGCAGAAGCCAAGCACACACACAGAACCTGCTCAGAGCCCACATTCCTTTCTCACAATGTCTGCTGGACACCACTATTCTTTATGTCATTTCACCACTAATAATTCTT-AATCTTACAAGATTTTAAAACA-CAAGAAAACTTAAGATATAAAACTGAATAGGCTTTTCATCTTTTTTA-TTACTACTGCC----CTAGTTCAGA-TCAACATAGCCGGGCTTCTGAA------------------------AGAGTCAAGTGGATCATGAGCTCCTAGCATGGTACAGACACTTTACTCACCACGTAGGCAGGCTAAGGTgca-------cggcc--------tgggtttcaa---ttctagatctacaagta i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76394228 2621 + 90941950 ttatagcaCAAAGTGGTAA--ACAAATTAGGGAGAACATGATCAAAGTGACCAGGGGATTCCCAAGCACCAGCTGGCTGCTCCAAGGGTTGTGGGGTATAGTAATCTTGGCATATTTTTATC-TCAATCTGGCATGAGGCA--T--TGGTAGGGAAGCTCTATTCCGGGGTTAATAAGTAAAAAATCAA-TtgagataaatatacaaataactgtAATGTAAACACAAAGGAAATAACTAAGGAGACTGTCACTGTCTGCTGTCATCAAACATAAGTGAGTGAAAATGAGATTAATTCAACTTGCTTCCTTTCATAACTCCTCTTCCAAACAAATCAAAAGACAGAACAGCCCATCCTTCA---GGTCAACAG--GGCT--GATCAATC--CCACCCACAAGGCTGCAAAGAGCCTGCACAGATGACTAGTTTAC----AGGGAGGCGAAAACTACTCAATGCACAT-TAGTGTGTCAGAAAAGT-TCCGAGCTCTTACAAA-----GActacac---aaaa-aa-atcaatagaggagagaaaataatatttcaaggTCATATTCAAACATGAAGGGAGAAGAACGGAAAGCAg-cccctcccaacacacac--------atatatacatatacgt-------cTTCTGTGAACAAGCTCCATCTCTCCAAACGCAGTTAAAAT-T-TGCTTTctgataatttataaatttagccTGCGTTAGCCAAGTAGGTTCCTGCAATTCCAGACATCTGGGCTGAAGGGCAAAGGGCAAAGGGAAACTTTCAAAAAGCTGGCTAGTAGCCAAGGGCATCACATCTAGTAGGCTCCCTTAGCAACACACAACAGCTGTTTGCTCGAGAGA-CATACTGCCATCTTTGCAACGGACTATAAGATGTTCTTGTCTTAACAACTAAAAATTGCAGGC-GGGTGCGGGGAGCA--GTTTCTGTATTATTTCCTCTGACATTCCTCTAAAAGTTATCACATATCATAATTTACAAACTTCTCCAGTTCTAGAAAGTTTTCCTCCATCCCAAACTACAATGCTACAATTAATGGTAAATTACTATAATAGAAGGTAC----TACATTCCTG----GCAAACATAAAATGCTTTATAATGTCTGATTATTAATTACTATTCTAACTGCTATAGACTTGATTTCTAACTATGGGCAAGTCACTCTTTGTGACTTAATTACTTTCCTCATACAATTTTAATAACAGTAGTGAGTGACCTACTTCACAAGGCTACTGTGAAGGATAGTAATAATTAATAGATAAAAGCTTAAGAAAACTTATTCCTAATTAATAATCATGCCACCTATTGGCTCTCAATATCTAAAGACATGGC----TTATGAAGGTCAGTACcgccaaaacaaaacacaagtcGATCCTGAGCCACCAGGAAGACTGCAGTTCCTGAAGCAACCAGCTC---ACTTCACCTGCCCCACTTGCCTTCTCCAAACCTACCAAGCCCGGGGGATGGTACTGCGCAGGGAGTTCAGCCCTTGCACCTAAGTCTGACAAGATAAATAACAT---AGGGGGAGGA-AATAAA------------CAATGTCACAATCAC-TGCTAGGTTTTAAAAACCTAACACCTTGGAACAGAAGGGGATGTGGCAGTCTGTGCTCTATG-GGGAGGCCATTTGTGCAACAGCAGAACCTCGCAGCTTTCCACTCCTTATATGTGCAAGTGCAAACCCTCACCCACAGCACTCTGTACTCACCCAGAGGTACATCATGTCAGATCGGGCTGCT-CAAACTCAGCGGTCAGTGGATCCTGGACTGC-AAAAAGGCACTTCAGCGAACCGTAGGAAAGAAGATGCCAGAACTGGGG--------G-----------GCAAGGGTTTGAGGTGGGGAGAAA-CCCCCCAAAATCACTTGAgtt--aaaaaatcct-----aaaaaaaaaaaaaagactggtct-------cctcccccctcctctccagctgactgttctgttgttctctctcct-ccctctcaccctccctccgtccctccgtccctccctctctctctcc----ctctctgtt----tctccctctctctctctctctctctctctctctctctctgggagtTCCCAGCCCTGAGTATCTGAACTAGAGTGTACAGCACACTCGCTCTGTATTTGCCTTCAGGGAATCTCTCTCTgtaattctacttctagaaaCACAATCACCACTCACAAAGATTATTGCAAAAGACAGGGACGGGTGGGGTCAGTTATAAACCACCAGCACCAGTTTCTAGTGCTAGATATACATTAGTTTAAGATGAGTTCTTTAAACATGAATGAAGCAATCAAAAA-TCTCTGCCCTCTAAGATCCAGGTGAG-TGAGCCAAGCT---TTCCCTCTGCCCCA--ACTGTG--GAGCCCCTTGCAGAAGCCAAGCACACACACAGAACCTGCTCAGAGCCCACATTCCTTTCTCACAATGTCTGCTGGACACCACTATTCTTTATGTCATTTCACCACTAATAATTCTTAAATCTTACAAGattttaaaaca-caagaaaactTAAGATATAAAACTGAATaggcttttcatctttttta-ttactACTGCC----CTAGTTCAGA-TCAACATAGCCTGGCTTCTGAA------------------------AGAGTCAAGTGGATCATGAGCTCCTAGCATGGTACAGACACTTTACTCACCACGTAGGCAGGCTAAGGTGCA-------CGGCC--------TGGGTTTCAA---TTCTAGATCTACAAGTA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18663196 2614 + 33263144 ttatagcacatagtggtaa--acaaattagcgagaacatgatcaaagtgaccaggggattcccaagccccagctggctgctccaatggttgtggggtatagtaatcttggcatatttttatc-tcaatctggcatgaggca--t--tggtagggaagctctATTCCGGGGTTAATAAGTAAAAAATCAA-TTGAGATAAATATACAAATAACTGTAATGTAAACACAAAGGAAATAACTAAGGAGACTGTCACTGTCTGCTTTCATCAAACATAAGTGAGTGAAAATGAGATTAATTCAACTTGCTTCCTTTCATAACTCCTCTTCCAAACAAATCAAAAGACAGAACAGCACATCCTTCA---GGTCAACAG--GGCT--GATCAATC--CCACCCACAAGGCTGCAAAGAGCCTGCACAGATGACTAGTTTAC----AGGGAGGCAAAAACTACTCAATGCACAT-TAGTGTGTCAGAAAAGT-TCCGAGCTCTTACAAA-----GACTACAC----AAA-AA-ATCAATAGAGGAGAGAAAATAATATTTCAAGGTCATATTCAAACATGAAGGGAGAAGCACAAAAAGCAG-CCCCTCCCAACACACAC--------ATATATACATATACGT-------CTTCTGTGAACAAGCTCCATCTCTCCAAACGCAGTTAAAAT-T-TGCTTTCTGATAATTTATAAATTTAGCCTGCGTTAGCCAAGTAGGTTCCTGCAATTCCAGACATCTGGGCTGAAGGGCAAAGGGCAAAGGGAAACTTTCAAAAAGCTGGCTAGTAGCCAAGGGCATCACATCTAGTAGGCTCCCTTAGCAACACACAACAGCTGTTTGCTCGAGAGA-CATACTGCCATCTTTGCAATGGACTATAAGATGTTCTTGTCTTAACAACTAAAAATTGCAGGC-GGGTGCGGGGAGCA--GTTTCTGTATTATTTCCTCTGGCATTCCTCTAGAAGTTATCACATACCATAATTTACAAACTTCTCCAGTTCTAGAAAGTTTTCCTCCATCCCAAACTACAATGCTACAATTAATGGTAACGTACAATAATAGAAGGTAT----TACATTCCTG----GCAAACATAAAATGCTTTATAATGTCTGATTATTAATTACTATTCTAActgctatagacttgatttctaactatgggcaagtcactctttgtaacttaattactttcctcatacaattttaataacagtagtgagtgacctacttcacaagactactgtgaaggatagtaataattaatagataaaagcTTATGAAAGCTTATTCCTAATTAATAATCATGATGCCTATTGGCTCTCAATATCTAAAGACATGGC----TTATCAAGGTCAGTACCCCCAAAACAAAACACAAGTCGATCCTGAGCCACCAGGAAGACTGCAGTTCCTGAAGCAACCAGCTC---ACTTCACCTGCCCCACTTGCGTTCTCCAAACCTACCAAGCCCAGGGGATGGTACTGCGCAGGGAGTTTAGCCCTTGCACCTAAGTCTGACAAGATAAATAACAT---AGGGGGAGGA-AATAAA------------CAATGTCACAATCAC-TGCTAGGTTTTAAAAACCTAACACCTTGGAACAGAAGGGGATGTGGCAGTCTGTGCTCTATG-GGGAGGCCATTTGTGCAACAGCAGAACCTCGCAGCTTTCCACTCCTTATATGTGCAAGTGCAAACCCTCACCCACAGCACTCTGTACTCACCCAGAGGTACATCATGTCAGATCGGGCTGCT-CAAACTCAGCGGTCAGTGGATCCCGGACTGC-AAAAAGGCACTTCAGCGAACCGTAGGAAAGAAGATGCCAGAACTGGGT--------A-----------GCAAGGGTTTGAGGTGGGGAGAAA-CCCCCCAAAATCACTTGAGTT--AAAAAATCCT---AAAAAAAAAAAAAAAAGACTGGTCT-------CCTCCCCCCTCCTCTCCAGCTGACTGTTCTGTTGTtctctctcct-ccctctcaccctccctccgtccctccgtccctccctctctctctcc--ctctctctgtt--------------tctccctctctctctctctctctctctctGGGAGTTCCCAGCCCTGAGTATCTGAACTAGAGTGTACAGCACACTCGCTCTGTATTTGCCTTCAGGGAATCTCTCTCTCTAATTCTACTTCTAGAAACACAATCAGCACTCACAAAGATTATTGCAAAAGACAGGGATGGGTGGGGTCAGTTATAAACCACCAGCACCAGTTTCTAGTGCTAGATATACATTAGTTTAAGATGAGTTCTTTAAACATGAATGAAGCAATCAAAAA-TCTCTGCCCTCTAAGATCCAGGTGAG-TGAGCCAAGCT---TTCCCTCTGCCCCA--ACTGTG--GAGCCCCTTGCAGAAGCCAAGCACACACACAGAACCTGCTCAGAGACCACATTCCTTTCTCACAATGTCTGCTGGACACCACTATTCTTTATGTCATTTCACCACTAATAATTCTT-AATCTTACAAGATTTTAAAACACCAAGAAAACTTAAGATATAAAACTGAATAGGCTTTTCATCTTTTTTA-TTACTACTGCC----CTAGTTCAGA-TCAACATAGCCTGGCTTCTGAA------------------------AGAGTCAAGTGGATCATGAGCTCCTAGCATGGTACAGACACTTTACTCACCACATAGACAGGCTAAAGTACA-------Cggcc--------tgggtttcaa---ttctagatctacaagta i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198371301 2597 + 210400635 ttatagcacaaagtgataa--acaaattagggtgcacatgatcaaagtgaccaggggactcccaagc-ccagctggctgctccaagggttgtagggtatagtacccttggcatatttttatc-tcaatctggcatgtggca--t--tggtagggaagctctgTTCTGGGG----TATGTAAAAAG--AA-TTGAGATAAATACACAAATAACTGTAACATGAGCACAAAGGAAATAACTAAGGAGACTGTCACTGTCTGCTTTCATCAAACATAAGTGAGTGAAAATGAGATTAATTCAACTGGCTTCCTTTCATAACTCCTCTTCCAAACAAATCTAAAGACAGAACAGTCCATCGTTTG---GGTCAACAG--GGCT--GATCAATT--CCAACCACAAGGCTGCAAAGATCCTGCACAAATGTCTAGTTTAC----AGGGAGGCAAAAACTACTTAATTCACAT-TAGTGTGTCAGAAAAGT-TCTGAGCTCTTACAAA-----TACTACAAAAAAAAA-AA-ATCAACAGAGGAGAGAA---AATATTTCAAGGTCATATTCAAACATGAAGGGAGAAGCAGGAAAAGCAGCCCCCTCCCAACACacacacacacatacatatacatatacat-------CTTCTGTGAACAAGTTCCATCACAGCAAACTCAGTTAAAAT-T-TCCTTTCTGAT-ATTTATAAATTTAGACTGTGTTAGCCAAGTAGGTTCCTGCAATTCCAGACATCTGGGCCGAAGGGCAAAGGGCAAAGGGAAACTTTCAAAAAGCTGACTAGTAGACAACGGCATCACGTCTAGTAAGCTCCCTTAGCAACACACAACAGCTGTTTGCTCAAGAGA-CATACTGCCATCTTTGCAACGAACTATAAGATGTTCTTGTC-TAACAACTAAAAATTGCAGGCAAGGGCAGGGGGATG--GTTTCTGTATTATTTCCCCTGACATTCCTCTAAAAGTAATCACATTTCATAATTTACAAACTTCTCCAGTCCCAGGAAATTTTCTTCCATCCCAAACTACAATGCTACAATTAACAGTATATTACAATAATAGAAGATTG----TATATTCCTG----GTAAATATAAAATGCTTTATAACATCTGATTATTAATTACTATTCTAActgctccagacttgatttctaactatgggcaagtcactctttgtgacttaattactttcctcatacaattttaataacagtagtgagtgacctacttcacaagaatgttgtga-----aataaaaattattagataaaaaCTTATGAAAGCTTATTCCTAATTAATAATCATGCCACCTACTGGCTCTCAATATGTAAAGGCATGGC----TTATCAAGGTCACTACCCACAAAACAGAACACAAGTTGATCCTGACCCACCAAGAAGACTGCAGTTCCTGAAGCAACTAGCTC---ACTTCACCTGCCCCACTTGCCTTCTCCAAACCCACCAAGCCCAGGGGATGGTACTGCGAAGGGAGTTCAGCCCTTGCGCCTAAGTCTGACAAGATAAACAACAT---AAGGGGAGGGAAAAAAA------------CAATGTCACAATCAC-TGCTAGGTTTTAAAAACCCAACACCTTGGAACAGAAGGGGATGTGGCAGTCTGTGCTCTGTG-GGGAGGCCATTTGTGCAAGAGCAGAATCTCACAGCTTTCCACTCCTTATATGTGCAAGTGCAAACCCTCACCCACAGCACTCTGTACTCACCCAGAGGTACATCATGTCAGATCGGGCTGCT-CAAACTCAGCGGTCAGTCGATCCTGGACTGC-AAAAAGGCACTTCAGTGAACCGTAGGAAAGAAGATGCCAGAACTGGGGGGAGGGGAG-----------GCAAGGGTTCAAGGTGGGGAGAAA-CCCCCCAAAATC------------------CTT------------AAAAAAAGACTGGTCT-------CCTCCCCCCTCCTCTCCAACTGACTGTTCTGTTGTtctctctcctcccctctcaccctccctctgtccctcc--------ctctccctctccctttctttctctctctctctctctctctctctctctctctctctctctctctctctGGGAGTTCCCAGTCCTGAGTTTCTGAACTAGAGTGTACAGCACACT--CTCTGTATTTGCCTTCAGGGAATCTCTCTCTGTAATGCTACTTCTAGAAACACAATCACCACTCACAAAGATTATTGCAAAAGACAGGGATGGGTGGGGTCAGTAATAAACCACCAGCACCAGTTTCTAGTGCTAGATATAAATTAGTTTAAGATGAGTTCTTTAAACATGAATGAAACAATCAAAAA-ACTCTGCTCTCTAAGATCAGGGTGAG-TGAGCCAAGCT---TCCCCTATGCTCCA--ATTCTG--GAGCCTCTTGCAGAAGCCAAGCACGCACACAGAACCTGCTCAGAGCCCACATTCCTTTGACACAATGTCTGCTTGACAACACTATTCTTT--GTCATTTCACCACCAATAATTCTC-AATCTTACAAGATTTTAAAACA-CAGGAAAACTT-AGATATAAAACTGAATAGGCTTTTCATCTTTTTTA-TTACTATTGCC----CTAGTTCAGA-TCAACATGACCTAGCTTCTGAA------------------------AGAGTCAAGTGGATCATGAGCTCCTAGCATGATACAGACACTTTACTAACCACACAGacaggctaaggtaca-------cagcc--------tggctttaaa---ttctagatctagaag-a i calJac3.chr1 C 0 C 0 s mm10.chr15 77201812 2430 + 104043685 TTATGGCACGCAGTGGCAGCTGCAGATT------CAGATGGTCAACACGACCAAGGAAATCAAACGACCC-TTTGGCTGTTCC----------------AGTTCTCTTGGCACAATGGCATCTTCAACACAACATGTGGTATAT--CAGTTAGCAAG--TTGTTCTGGGGCCC-TAAGTAAAGGG---A-CTAAGATAAATATATGTGTAACAATAAGAGACACACAAAAGATAGAAT---GGAGACAGTCACTGTCAG-TTTCAACAAGCCTAAGTAAGCTGAAATGAGATTAACTCAACTCATATCCCTTCACAATTTGTCTTAGAAAC-AATCAAAAGATAGACAAGGCCATTTTTCC---AG------A--GGCTGGGATCAATCCTCCACCCA-----------------------------------------------GCAAAAACTACTTAGTGCCCAT-TAGTGTACCAGCAAACC-CCTGAGTTCTCAGAAACGCAGCACTACAA----AAA-CACATCAATAGAGAGGAGGAAATTACATTTCAAGGTCATGTTCAAATGTGAAA-GAGAAACAGATAAAGCAG-TCTCCCCA---GTACAC-----------CATACAGATGC----------TTATGCACTCCAAC-CCATCTTCACAAACCTCATTGAAATGT-TGGCTTCTGGC-ATTTACAAATGTAGCTCCCCGGAGCCAAGTAGGTTCCTGCAATTCCAGACATCTGGGCTGAAGGGCAAAGGGCAGAGCGAAACTTCC-AAAAGCTGGCTAGGAGCCAAAGGCATCA---CTAGTAGGTTCCCTTAGCAACACAAAACAGCTGTCTA--CAAGGCA-GCCAGCACCAGCTTTACAAGGGATTAC-TGATTTTAGTATTTTTACAACTAAA-------GGC-AAAGAGGGAGAAAAGGGGCCCTGCATCATTTTTCCTGACATTTTCCTCAAAGATTTTATATTTCACCATTTATAAACTTCTCTAACTATAGAACATTCTCCTTACCCATAAATTACAATGCCACAATTACCAGTAAATTAAAGTAAAGTAAGGTACATATTAAGTTCTTGATTTACAAATATAAAATGCTTTATAATGGCTGGTTATTAATTATTATCCCAGTTGCCATAGGCCTTATTTCTAACTATGAGCAAGTCA--CGTTGTGGCTTAATTACTTCCCTCATATAGGTTTAATAACAAC----AATGACCTACTTCACAAGACAACTGTGAAGGACATT---AGCTATTGGACAAAAACTTACAAAAGCTTATTCCTAATTAAGGACTGTGCCATCTACTGGTGCTC----TCTACAGATGTGGCCATATTATCAAGGTCAGTGTTCGAAATACATACCACAAGCCCATCCCGACCCTCAAGAGGGACTGCTACTCCTGAAGCCTCTAGCTC---ATGTCACCTG-CCCACTTGCCTTCTCCAAACCTACTAAGCCCAGGGGACAGCACTGCTCTGGGAGCTCAGCCCTTGCA-TGAAGTCTAACAAGATAAACAACAT-------TCAGAA-AGCAAA------------CACCGACACAGTGATGTGCTAGGCTGGAAGGCCCT--CACCTGTGTAAGGAAGG----GCCGGGGCCTGTGCTC---------GAGCCTCTGTGCAGGAGCAGAGCCC--CAGCTTTCCACTCCTTATATGTGCAAGTGCGAG-CCTCA-CCACAGCACTC--TACTCACCCAGAGGTACATCATGGCAGA----GCCGCTGCAGATTCAGCTGGC-GTTGAGCCTGGACTAC-AAAAAGGCACTTCAGTGAGCCAGAGGAAAAGGGACAGTAGAA-TGAGG--------G-----------GCAAGGGATCAA-GTGGGGCGAA---CCCCTCAAATCACTTGAGTTTAAAAAAATCCC-CTAAAAAAATCCCTACCAGttttcccc-------cctcctccctcctctcc-gcagactgttctgttgt--tctctcct-ccctctcaccctccctcctccccccc-----------------------------------------------------------------------cctcAGGGAGTTCCCAGCCC-AAGTGTCTAAACTGGAGTGTACAGCATACACTCTCTGTATTTGCCTTCAGGGAATCTCTCT-----GTCATTCTCCTAGAAGCAAGATCACCACTCACAAAGATTGCTGCAAGAGGCAGGGCCGGGCAGGGCTGGTAATGAACAACCAGCACCTGATTCTAGTGTTGGACACA------------ATCAGTTC---AAACATGAGTGATGCAACTAGACA--CTCTGCCCTCCAAGATCAAGGCAGA-AGCACGGAGCTCGGCCCCGTCCGTCCCC--ATTCTTCCAGGTTCCTGGCAGAGGCTAGGCACACACGCAG-ATCGGCTGGGCTTCTGCCTTTGCTTTCCAC----TGGCCTGGGGCCCACTATGCTTTTTGTCACTTCATCACTGAAAACTATC-AATC-TGTAAGGTTTTAAAATA-CGGGAAATCC--AGACACACACTTAAAAAGGCTTTTTGTCATTATTAGTTCTTGCTGCCATCACTAGTCCCTACTTAACATAGCCTCCTGTCTGAA------------------------AGGACCA--TCAACCAGGGTTTTAGAGCATGCTACAGACTCTAC-CTGAACACGTGGACACAGTAGGGTCCATATTTCTCAACCATGAAATACAGGTGTTAAACTTTTTAGAGCTGCAATTA i mm10.chr15 I 551 I 199 s canFam3.chr10 40984124 2569 - 69331447 ttaaggcacaaagtggcaa--actagaatgaatgaatgcattcaaa-tgaccaggggaatcctgggccccacctggctgctccaaggatggaggagaataattatgttggcatatgtgcatc-tcagtccaacatccagta--ctgtggttgggaagctctgTTC------TAATAAGCACAGGG--GA-CTGAGACGAATTTACAAATAACTATAA-----GCACAAAGAAAGAGACTGAGAAGACTGTCACTGTCTGCTCTCATCAAACATAAGTGAGTAGAAATGAGATCAATTCAATCTGCTTCCTTTCATAATTCATCTTCCAAACAAATC--AAGACCAAATAACTCATCCTTCCTCTGGTCGACAGATAACT--GATCAGTC--CCACCAAGAAGGCTGCAAAGACCCTTGACAGATGCCTTGCTCATAGTAAGTAAGCTAAAGACTACTTAAAGCACATAAAGTGTGTCAGAAAGTTCTTTGACTTCTTACAAA-----CACTAGAA----AAATAA-ACCAATA-AGAGGAGGAAATTACATTTCAAGGTCATATTCAAATATGAAGGGAGAAGCAGGAAAAGAAG-CCCCTCCCAAAACACAT----------ACACACAAACACATCACATCCCCTCTGTGACCAAGCTCCATCTCCAGAAACCTAGTTAAAAT-TCTGCCTTCTGAT-ATTTATAAATTTAGTCAGCCTGAGCCAAGTAGGTTTCTGCAATTCCAGACATCTAGGCTGAAGGGCAAAGGGCAAAGTGAAACTTTC-AAAAGCTGGCTAGTAGCCAAGGGCATCACATCGAGGAGGCTCCCTTAGCAACACACAACAGCTGTCTGCTCAAGAGAGGGTGCCGCCATCTTTGCAAGGGGCTAT-AGATGCTCTTATTTTCACAACTAAAA---GCAAGG-TTTTT-----------TTCCTTGTATTATTTTCCCAGTCATTCCCCTAAAAGTTATCACATCTCACAATTTAAAAACCTCTCCAATCCCA-ACCTTTCCTCTTCATCGCAAATTACA---TCATAGTTAACAATAAATTTAAATAATGTAAAGTAT----TA-GTTCTTG----GCAAATATAAAATGCTTTATAATGTCTCGTTATTAATTACTATTCTAGTTTCTGTAGACTTGGTTTCTAACTACAAgcaagtcactctgtgtgatttaattacttccctcataaaatcttcataacaac----agtgacctacttcataagactattgtgaaggacaataaaaattattagataaaaacttataaaagCTTATTCCTAATTAAGAATCACACCACCATCTGGCTTTCAATATCTAAAGAGATGGTTTGATTATCAAAGGCAGTGCCCCCAAAACA-AACACAGGTGGATCCTGACCCACCAGGAAGACTGCAGCTCCTGGAACGGCTGGCTC---CTTTTGCCTGCCCCATCTGCCTTCTCCAACCCTACCAAGCCCAGAGGATGACACCGCACTGGGAGCTCA-CCCTTGGGCCTAAGTCTAACAAGATAAACAACATTTTAAAAAAACAA-AACAAAAACAAACCCAACCAATGTCACAATCAC-TGCTAGGTTTCAAGAACCTAACACCTGGGAGTAGAAAGGGATGGGGCTGCCTGCGCTCTGAGAGGAAGGCCATTTGTGCTGGAGCCGAACCTCGCAGCTTTCCACTCCTTATATGTGCAAGTGCAAGCCCTCACCCACAGCACTCCGTACTCACCCAGAGGTACATCATGTCAGACCGGGCTGCT-CAAACTCAGCGGCCAGTTGATCCTGGACTGC-AAAAAGGCACTTCAGTGAACTGTAGGAAAGGAGGTGCCAGGCTGGGGG--------GGGCGGGGGGCTGCAAGGGTTCGGGGTGGGGAGAGACCCCCCCCAAATCACTTGAGTT--TAAAAATCTA---------------CCACGACCGGTCTTCTCCCCCCTCCTCCCTCCTCTCCAGCTGACTGTTCTGTTGTTctctctcct-ccctctccccctccctctcctcctcc------------------------------------------------------ctctctccttctccctctctctGGGAGTTCCCAGCCCCGTGTGTCTGAACCAGAGTGTACAGCACTCTCTC------TTTGCCTTCAGGGAATCTCTCC--GTCATTCTACTTCTAGAAACACAATCATCACTCACAGAGATTACTGCAAAAGGCAGGGATGGGCGGAGCTAGTAATAAACCACCAGCACCAGTTTCTAATGCTAGACACAAACTAGTTTAAGACAAGTTCTTTAAATATGAATGAAGCAATGAAAAAAATTCTGCCCTCCAAGAAGATGAAGAGTTGAGTCAAGTT---TCCCTTCTGTCCAATCCTTCTG--GAGCCTCCT-CAGAAGCCACGCAGGAACACAGAACCTGCTCAGAGCCTGTATTTCCTCCCTGCAATGCTGGCCT-ATGCCACTCTTCT-----------------AAATAATTCTA-AA-----------TTTAAAACA-GAAGAAAAAATTACATATAAACTCAAATAGGCTTTT-ATCTTTTTTA-TTACTGTTGCC----CTAATTCAAA-TCAACACAGCCTCCTTTCTGAAGAGAGAGAAGACAAGCAAGGGTTTAGAGTCACATGGATTCTGAGCCCTTAGCATGTTGCAGATTCTTtactaggcaagaggacagcacaggggaca-------aagca--------tgggtttgga---agctgaatttacaatta i canFam3.chr10 C 0 C 0 a score=371983.000000 s hg38.chr22_KI270876v1_alt 216732 112 + 263666 ctatcattatggcctggggaaagtt-tccaacctgtccaggcttctgtttcctctaccaaaaaataggtttaatactcctttcagaggtgttgt----------aatgatATAACTACGTAAA s panTro4.chr22 34596281 112 + 49737984 ctatcatcatggcctggggaaagtt-tccaacctgcccaggcttctgtttcctctaccaaaaaataggtataatactcctttcagaggtgttgt----------aatgatataactacgtaaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31016313 112 + 46535552 ctatcattatggcctggggaaagtt-tccaacctgtccaggcttctgtttcctctaccaaaaaataggtataatactcctttcagaggtgttgt----------aatgatataactacgtaaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100569847 112 - 115148730 ctatcattatggcctggggaaagtt-tccaacctgtccaggcttctgtttcctctaccaaaaaataggtataatactcctttcagaggtgttgt----------aatgatataactatgtaaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80714182 112 + 95678458 atatcattatggcctggggaaagtt-tccagcctgtccaggcttctgtttcctcaaccaaaaaataggtataatactcctttcagaggtgttgg----------aatgatataactacgtaaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81140751 112 - 96509753 atatcattatggcctggggaaagtt-tccagcctgtccaggcttctgtttcctcaaccaaaaaataggtataacactcctttcagaggtgttgg----------aatgatATAACTACGTAAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76396849 112 + 90941950 ATATCATTATGGCCTGGGGAAAGTT-TCCAGCCTGTCCAGGCTTCTGTTTCCTCAACCAAAAAATAGGTATAATACTCCTTTCAGAGGTGTTGG----------AATGATATAACTACGTAAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18665810 112 + 33263144 atatcgttatggcctggggaaagtt-tccagcctgtccaggcttctgtttcctcaaccaaaaaataggtataaaactcctttcagaggtgttgg----------aatgatATAACTACGTAAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198373898 109 + 210400635 ctatcgtgatggcctggggaaattt-tccaacctgcccaggcttctgtt---tcaaccaaaaaataggtgtaatacttgttttggaggtgccgt----------gatgatGCAACTATGTAAA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40986693 122 - 69331447 ttattatcacggactagggaaaattatttaacaagactaggc-cctgtttcctcaaccaaaaactgtatttagtactctttgtagagttgtcgtagttagatcaaatgatagaaccatgtaaa i canFam3.chr10 C 0 C 0 e mm10.chr15 77204242 199 + 104043685 I a score=737270.000000 s hg38.chr22_KI270876v1_alt 216844 228 + 263666 CTGTCTGCCATGTTCCTGG------------------------TGACCA----------TGTTTTCTAATTttaattcagttcaaacatttattaagtacttcctatatgccaggcgagttttcattcattatgcccagtggtg---aacaagtattatcaaatcacctgtcctaatggTTTTTATTCAGAAAATCACGTAATTATCCCCCATATTCTAATGCCAATGTCAATGCCCATACGTGTTCCTTGCTTCCCCGACCCCT s panTro4.chr22 34596393 223 + 49737984 ctgtctgccatgttcctgg------------------------TGACCA----------TGTTTTCTAATTttaattcagttcaaacatttattaagtacctcctatatgccaggagagtt----ttcattatgcccagtggtg---aacaagtattatcaaatcacctgtcctaatggTTTTTATTCAGAAAATCACGTAATTA-CCCCCATATTCTAATGCCAATGTCAATGCCCATACGTGTTCCTTGCTTCCCCGACCCAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31016425 228 + 46535552 ctgtctgccatgttcctgg------------------------TGACCA----------TGTTTTCTAATTttaattcagttcaaacatttattaagtgcctcctatatgccaggcgagttttcattcattatgcccagtggtg---aacaggtattatcaaatcacctgtcctaatggTTTTTATTCAAAAAATCACTTAATTATCCCCAATATTCTAATGCCAGTGTCAATGCCCATACGTGTTCCTTGCTTCCCTGACCCAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100569959 228 - 115148730 ctgtctgccatgttcctgg------------------------TGACCA----------TGTTTTCTAATTTTAGTTCAGTTcaaacatttattaagtgcctcctatatgccaggcaagttttcattcattatgcccagtggtg---aacaagtattatcaaatcacctgtcccaatggTTTTTATTCAGAAAATCACATAATTATCCCCCATATTCTAATGCCAATGCCAATGCCCATACGTGTACCTTGCTTCCCTGACCTAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80714294 223 + 95678458 cggtctgccatgttcctgg------------------------TGACCA----------TGTTTTCTAATttcagttcagttcaaacatttattaagtgcctcctat-tgccaggcaagtttttattcattatgcccagtggtg---aacaagtattatcaaatcacctgtcctaatggTTTTTATTCAGAAAATCACGTAATTATCCCCCATATTCTAATGCCAATGTCAAGGCC----CATGTTCCTTGCTTCCCTGAGCCAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81140863 223 - 96509753 CGGTCTGCCATGTTCCTGG------------------------TGACCA----------TGTTTTCTAATttcagttcagttcaaacatttattaagtgcctcctat-tgccaggcaagtttttattcattatgcccagtggtg---aacaagtattatcaaatcacctgtcctaatggTTTTTATTCAGAAAATCACGTAATTATCCCCCATATTCTAATGCCAATGTCAAGGCC----CATGTTCCTTGCTTCCCTGAGCCAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76396961 222 + 90941950 CGGTC-GCCATGTTCCTGG------------------------TGACCA----------TGTTTTCTAATTTCAGTTCagttcaaacatttattaagtgcctccTAT-TGCCAGGCAAGTTTTTATTCATTATGCCCAGTGGTG---AACAAGTATTATCAAGTCACCTGTCCTAATGGTTTTTATTCAGAAAATCACGTAATTATCCCCCATATTCTAATGCCAATGTCAAGGCC----CATGTTCCTTGCTTCCCTGAGCCAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18665922 227 + 33263144 CAGTCTGCCATGTTCCTGG------------------------TGACCA----------TGTTTTCTAATttcagttcagttcaaacatttattaagtgcctcctat-tgccaggaaagttttcattcattatgcccagtggtg---aacaagtattatcaaatcacctgtcctaatggtttgtattcAGAAAATCACATAATTATCCCCCATATTCTAATGCCAATGTCAAGGCCCATACATGTTCCTTGCTTCCCTGAGCCAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198374007 234 + 210400635 CCATCTGCCATGTTCCTGG------------------------TGACCACCAGGATTTCTAATTTCTAATTTTAGTTCAGTTcaaacatttattaagtgcctcctatatgccaagcaagtt-tcattcattacacccagtggtg---aacaag---tatcaaataacctatcctaatCGTTTTTATTCAGAAAACAATAGAATTATTCCCCACATTCTAATGCTAATACCAGTGCCCATGCTTGGTCCCTGATTCCCTGACCCAT i calJac3.chr1 C 0 C 0 s mm10.chr15 77204441 231 + 104043685 ctgcctcccaagtgctgggattaaagttatgtgctactactcctggctG----------CATTTTCTAATTTTAATTCAATTTAAATAC--------TGTCTTCTGCACACCA---AATCTTCTACCTATTATGACCACTGATG---AATAAGTATTATTGAATCACTCATTCTGGTGGCTTTCACTCC-AAAACCAGTGAATTTGCCCCTGTATGTCA--------GTCAGTGCTCCCAC-TCTCTCTGACCTCACTGACAACT i mm10.chr15 I 199 I 103 s canFam3.chr10 40986815 212 - 69331447 ctatctgacaagttcctgg------------------------TGACC-----------TGTTTCTTCATAT-AGTGTAGTTCAGACACTCAATAAGGGCTTCAGATATGCCAAGTATATTTTGATCCATTATGTTCAACGGTGAACAACAAGCATCATCAAATCATCTGTCCTGGTGGTTTTTATTCAGAAAATAGCTGACT---CCTCCATAC------------ACCAGAGTGCATGCTCTCTCCTTACTTCCC--ACCCAT i canFam3.chr10 C 0 C 0 a score=38581.000000 s hg38.chr22_KI270876v1_alt 217072 13 + 263666 TTCTCCATGTTCA s panTro4.chr22 34596616 13 + 49737984 TTCTCCATGTTCA i panTro4.chr22 C 0 I 114 s ponAbe2.chr22 31016653 13 + 46535552 TTCTCCATGTTCC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100570187 13 - 115148730 TTCTCCGTGTTCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80714517 13 + 95678458 TTCTCCATGTTCA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81141086 13 - 96509753 TTCTCCATGTTCA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76397183 13 + 90941950 TTCTCCATGTTCA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18666149 12 + 33263144 TTCTCCATGTTC- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198374241 13 + 210400635 TTTTCCATGTTCA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40987027 13 - 69331447 TGCTGCAAACTCA i canFam3.chr10 C 0 C 0 e mm10.chr15 77204672 103 + 104043685 I a score=111672.000000 s hg38.chr22_KI270876v1_alt 217085 41 + 263666 AATCCAAAAGCAAACCCCAGCTGTGAGTGAGCTCTCCTTTC s ponAbe2.chr22 31016666 41 + 46535552 AATCCAAAAGCACACCCCAGCTGTGAGTGAGCTCTCCTTTC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100570200 41 - 115148730 AATCCAAAAGCACACCCCAGCTGTGAGTGAGCTCTCCTTTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80714530 41 + 95678458 AATCCAAAAGCACACCCCAGCTGCGAGTGAGCTCTCCTTTC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81141099 41 - 96509753 AATCCAAAAGCACACCCCAGCTGCGAGTGAGCTCTCCTTTC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76397196 41 + 90941950 AATCCAAAAGCACACCCCAGCTGCGAGTGAGCTCTCCTTTC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18666161 41 + 33263144 AATCCAAAAGCACACCCCAGCTGTGAGTGAGCTCTCCTTTC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198374254 39 + 210400635 AATCCAAAAGCACAACCCAGTGATGAATGAG--CTCCTTTC i calJac3.chr1 C 0 C 0 s canFam3.chr10 40987040 41 - 69331447 AATCCAAAAACCCACCCTGGCTGCACGGGACCCCTCCCTCC i canFam3.chr10 C 0 C 0 e mm10.chr15 77204672 103 + 104043685 I e panTro4.chr22 34596629 114 + 49737984 I a score=186516.000000 s hg38.chr22_KI270876v1_alt 217126 71 + 263666 TCTGTGGGGACTGGTGTTTGTAACATGGCATTGACCACCTCTGTGGGCTACTTCTCCAAGTATTCCTATAG s ponAbe2.chr22 31016707 71 + 46535552 TCTGTGGGGACTGGTGTTTGTAACACGGCATTGACTATCTCTGTGGGCTACTTCTCCAAGTATTCCTATAG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100570241 71 - 115148730 TCGGCGGGGCCTGGTGTTTGTAACACGGCATTGACCACCTCTGTGGGCTACTTCTCCAAGTATTCCTATAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80714571 71 + 95678458 TCTGTGGGGCCTGGTGTTTGTAACATGGCACTGACCACCTCTGCGGGCTACTTCTCCAAGTATTCCTATAG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81141140 71 - 96509753 TCTGTGGGGCCTGGTGTTTGTAACATGGCACTGACCACCTCTGCGGGCTACTTCTCCAAGTATTCCTATAG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76397237 71 + 90941950 TCTGTGGGGCCTGGTGTTTGTAACATGGCACTGACCACCTCTGCGGGCTACTTCTCCAAGTATTCCTATAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18666202 71 + 33263144 TCTGTGGGGCCTGGGGTTTGTAACATGGCACTGACCACCTCTGCGGGCTACTTCTCCAAGTATTCCTATAG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198374293 57 + 210400635 TCTGTGAGGCCAGTTGTTTGTAACATGACATTGACCACCTCTGCAGGCTACTACTCC-------------- i calJac3.chr1 C 0 C 0 s mm10.chr15 77204775 64 + 104043685 CCTCCTAGGCCTGGAGCATGTAACCCAGCATTTGCCACCTCCACAA-------CAGCAGGTATTTCCATAC i mm10.chr15 I 103 C 0 s canFam3.chr10 40987081 66 - 69331447 TCTGC-AAGCCTGGTGTTTGTAACATGGCTTTCATCACATCTGCCAGTTACTGCTAC----ATTCCTGTAC i canFam3.chr10 C 0 C 0 e panTro4.chr22 34596629 114 + 49737984 I a score=96137.000000 s hg38.chr22_KI270876v1_alt 217197 39 + 263666 ---CAAACCACTTCTCCTC--TGCACATCTTCCTCAGTGGAGAC s panTro4.chr22 34596743 39 + 49737984 ---CAAACCACATCTCCTC--TGCACTTCTTCCTCAGAGGAGAC i panTro4.chr22 I 114 I 272 s ponAbe2.chr22 31016778 39 + 46535552 ---CAAACCACTTCTCCTC--TGCACATCTTCCTCGGTGGAGAC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100570312 39 - 115148730 ---CAAACCACTTCTCCTC--TGCACATCTTCCTCGATGGAGAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80714642 39 + 95678458 ---CAAACCACTTCTCCTT--TGCACATCTTCCTTGGTGGAGAC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81141211 39 - 96509753 ---CAAACCACTTCTCCTT--TGCACATCTTCCTTGGTGGAGAC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76397308 39 + 90941950 ---CAAACCACTTTTCCTT--TGCACATCTTCCTTGGTGGAGAC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18666273 39 + 33263144 ---CAAACCACTTCTCCTT--TGCACATCTTCCTGGGTGGAGAC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198374350 37 + 210400635 -----AATCGTATCTCCTT--TCCACGTCTTCCAGGGTGGAGAT i calJac3.chr1 C 0 C 0 s mm10.chr15 77204839 30 + 104043685 --------CATTTTT-CTC--TTCACATCCTTTAGGGTACA--- i mm10.chr15 C 0 C 0 s canFam3.chr10 40987147 42 - 69331447 CTACCAATCTTAACGCCTTGATCCACATGTATCTGGGGGGAC-- i canFam3.chr10 C 0 C 0 a score=210120.000000 s hg38.chr22_KI270876v1_alt 217236 72 + 263666 CTAACATCTCGTCTTGGCTCATCCATTTTTGGCCATGGagtcttttgcat-agtacctagcacacagtaggtg s ponAbe2.chr22 31016817 72 + 46535552 CTAACATCTCTTCTTGGCTCATCTATTTTTGGCCATGGagtcttttgcat-agtacctagcacacagtaggtg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100570351 72 - 115148730 CTAACATCTCGTCTTGACTCATCTATTTTTGGCCATGGagtcttttgcat-agtacctagcacacagtaggtg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80714681 72 + 95678458 CTAACATCTCGTCTTGACTCATCTATTTTTGGCCATGGAGTCTTTTGCat-agtacctagcacatagtaggtg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81141250 72 - 96509753 CTAACATCTCGTCTTGACTCATCTATTTTTGGCCATGGAGTCTTTTGCat-agtacctagcacatagtaggtg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76397347 72 + 90941950 CTAACATCTCATCTTGACTCATCTATTTTTGGCCATGGAGTCTTTTGcat-agtacctagcacatagtaggtg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18666312 72 + 33263144 CTAACATCTCGTCTTGACCCATCTATTTTTGGCCATGGAGCCTTTTGCGT-AGTACCTAGCACATAGTAGGTG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198374387 73 + 210400635 CTAACATCTTGTCTTGGCTCATCTATTTTTGGCCATGGagtcttttgcataagtacctggcacacagtaggtg i calJac3.chr1 C 0 C 0 s mm10.chr15 77204869 51 + 104043685 ----------------GTTTATCTATTTCTGGATCTTGAATTATCTGCAT-AGTGACTGCCATAGAGC----- i mm10.chr15 C 0 C 0 s canFam3.chr10 40987189 54 - 69331447 ------------------CCATCTATTTTTGGCCATGAGGTCTTTTGCAT-GATACCTAACACACAGTGAGTG i canFam3.chr10 C 0 C 0 e panTro4.chr22 34596782 272 + 49737984 I a score=2023383.000000 s hg38.chr22_KI270876v1_alt 217308 551 + 263666 cacaaAACATTCTCAAACGG------TAACAGGTTTTGAGGAATATTCCACTCCTTCCCACTCATTAAAGAA------aacacaaaaca-----------------aaataaaaagcaaacaaaa--------ACCACCTTCCAGCTGCCTCAGGGTTTTGGCTCCCCCTC-AGACATGCTGAAACAGCTCCTTCCTGCT--TATAAAATCTCCAAGTAAGGTCTACAAGTCTCACATTCAAGGTAGGCCCCATGCAGGT--------ACTTTCACTCTCCCTACCTAATA--TTCCCACTGTGCGTGCTCTGGGCTTAGTTACCTGCCATAGTGGGGTTTCTTC--CTCTTAGGGTAGAAATAGAATCACTTTTCCTTTTCTTTCACACTGAACGCATGCTTTCCGCAGACGA-------------Acgttttct--ctcctcccaccttaaactcccagctcatttaaacttggagaggtggggcaggtattcttcttggcctcacccaaaccttttctttttctctacatagaacct--ctctgcttCTTCTGAAGGCAAGATTACTACATTTCTAGTACAAAAGAGGAGAAAGAACTTCCAAGCCTGAAACTGAGA s panTro4.chr22 34597054 551 + 49737984 CACAAAACATTCTCAAACGG------TAACAGGTTTTGAGGAATATTCCACTCCTTCCCACTCATTAAAGAA------AACACAAAACA-----------------AAATAAAAAGCAAACAAAA--------ACCACCTTCCAGCTGCCTCAGGGTTTTGGCTCCCCCTC-AGACATGTTGAAACAGCTCCTTCCTGCT--TATAAAATCTCCAAGTAAGGTCTACAAGTCTCACATTCAAGGTAGGCCCCATGCAGGT--------ACTTTCACTCTCCCTACCTAATA--TTCCCACTGTGCGTGCTCTGGGCTTAGTTACCTGCCATAGTGGGGTTTCTTC--CTCTTAGGGTAGAAATAGAATCACTTTTCCTTTTCTTTCACACTGAACGCATGCTTTCCGCAGACGA-------------Acgttttct--ctcctcccaccttaaactcccagctcatttaaacttggagaggtggggcaggtattcttcttggcctcacccaaaccttttcttcttctctacatagaacct--ctctgcttCTTCTGAAGGCAAGATTACTACATTTCTAGTACAAAAGAGGAGAAAGAACTTCCAAGCCTGAAACTGAGA i panTro4.chr22 I 272 C 0 s ponAbe2.chr22 31016889 547 + 46535552 cacaaAACATTCTCAAAGGG------TAATAGGTTTTGAGGAATATTCCACTCCTTCCCACTCATTAAAGAA------AAAACAAAACA-----------------AAATAAAAAGCAAACAAAA--------ACCGCCTTCCAGCTGCCTCAGGGTTTTGGCTCCCCCTC-AGACATGTTGAAACAGCTCCTTCCTGCT--TATAAAATCTCCAAGTAAGGTCTACAAGTCTCACTTTCAAGGTAGGCCCCATGCAGGT--------ACTTTCACTCTCCCTACCTAACA--TTCCCACTGTGCGTGCTCTGGGCTTAGTTACCTGCCATAGTGGGGTTTCTTC--CTCTTAGGGTAGAAATAGAATCACTTTTACTTTTCTTTCACACTGAACGCA----TTCCACAggcga-------------accttttct--ctcctcccaccttaaactcccagctcatttaaacttggagaggtggggcaggtattcttcttggcctcacccaaaccttttctttttctctacatagaacct--ctctacttcttctgaaggcaagattactacatttctagcacaAAAGAGGAGAAAGAACTTCCAAGCCTGAAACTGAGA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100570423 557 - 115148730 cacaaAACATTCTCAAAGGG------TAATAGGTTTTGAGGAATATTCCACTCCTTCCCACTCATTaaagaaaaaaacaaaacaaaaca-----------------aaataaaaagcaaacaaaa--------aCCACCTTTCAGCTGCCTCAGGGTTTTGGCTCCCCCTC-AGACATGTTGAAACAGCTCCTTCCTGCT--TATAAAATCTCCAAGTAAGGTCTACAAGTCTCACATTCAAGGTAGGCCCCATGCAGGT--------ACTTTCACTCTCCCTACCTAATA--TTCCCACTGTGCATGCTCTGGGCTTAGTTATCTGCCATAGTGGGGTTTCTTC--CTCTTAGGGTAGAAACAGAATCACTTTTCCTTTTCTTTCACACTGAAAGCATGCTTTCTGCAGACGA-------------ACCTTTTCT--CTCCTCCCACCTTAAACTCCCAGCTCATTTCAACTTGGAGAGGTGGGGCAGGTATTCTCCTTGGCCTCACCCAAACCTTTTCTTTTTCTCTACATAGAACCT--CTCTGCTTCTTCTGAAGGCAAGATTACCCCATTTCTAGTACAAAAGAGGAGAAAGAACTTCCAAGCCTGAAACTGAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80714753 568 + 95678458 caaaaaacattCTCAAAGGG------TAATAGGTTTTGAGGAATATTCCACTCCTTCCCACTTATTaaagaa------aaaacaaaaaataaaaaataaataaaataaataaaaagcaaataaaa--------aCCACCTTTCAGCTGCCTCAGGGTTTTGGCTCCCCCTC-AGACATGTTGAAACAGCTCCTTCCTGCT--TATAAAATCTCCAAGTAAGGTCTACAAGTCTCACACTCAAGGTAGGCCCCATGCAGGT--------ACTTTCACTCTCCCTACCTAATA--TTCCCACTGTGCGTGCTCTGGGCTTAGTTACCCGCCGTAGTGGGGTTTCTTC--CTCTTAGGGTAGAAATAGAATCACTTTTCCTTTTCTTCCACACTGAACGCATGCTTTCCGCAGAAGA-------------ACCTTTTCT--CTCCTCCCACCTTAAACTGCCAGCTCACTTAAACTTGGAGAGGTGGGGCAGGTATTCTTCTTGGCCCCACCCGAACCTTTTCTTTTTCTCTACAGAGAACCT--CTCTGCTTCTTCTGAAGGCAAGATTACCACATTTCTAGTACAAAAGAGGAGAAAGAACTTCCAAGACTGAAACTGAGA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81141322 561 - 96509753 caaaaaacattCTCAAAGGG------TAATAGGTTTTGAGGAATATTCCACTCCTTCCCACTTATTaaagaa------aaaac-------aaaaaataaataaaataaataaaaagcaaataaaa--------aCCACCTTTCAGCTGCCTCAGGGTTTTGGCTCCCCCTC-AGACATGTTGAAACAGCTCCTTCCTGCT--TATAAAATCTCCAAGTAAGGTCTACAAGTCTCACACTCAAGGTAGGCCCCATGCAGGT--------ACTTTCACTCTCCCTACCTAATA--TTCCCACTGTGCGTGCTCTGGGCTTAGTTACCCGCCGTAGTGGGGTTTCTTC--CTCTTAGGGTAGAAATAGAATCACTTTTCCTTTTCTTCCACACTGAACGCATGCTTTCCGCAGAAGA-------------ACCTTTTCT--CTCCTCCCACCTTAAACTCCCAGCTCACTTAAACTTGGAGAGGTGGGGCAGGTATTCTTCTTGGCCCCACCCAAACCTTTTCTTTTTCTCTACAGAGAACCT--CTCTGCTTCTTCTGAAGGCAAGATTACCACATTTCTAGTACAAAAGAGGAGAAAGAACTTCCAAGACTGAAACTGAGA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76397419 568 + 90941950 caaAAAACATTCTCAAAGGA------TAATAGGTTTTGAGGAATATTCCACTCCTTCCcacttattaaagaa------aaaacaaaaaataaaaaataaaataaataaataaaaagcaaataaaa--------accaccTTTCAGCTGCCTCAGGGTTTTGGCTCCCCCTC-AGACATGTTGAAACAGCTCCTTCCTGCT--TATAAAATCTCCAAGTAAGGTCTACAAGTCTCACACTCAAGGTAGGCCCCATGCAGGT--------ACTTTCACTCTCCCTACCTAATA--TTCCCACTGTGCGTGCTCTGGGCTTAGTTACCTGCTGTAGTGGGGTTTCTTC--CTCTTAGGGTAGAAATAGaatcacttttccttttcttccacacTGAACGCATGCTTTCCGCAGAAGa-------------accttttct--ctcctctcacctTAAACTCCCAGCTCACTTAAACTTGGAGAGGTGGGGCAGGTATTCTTCTTGGCCCCACccaaaccttttctttttctctacagaGAACCT--CACTGCTTCTTCTGAAGGCAAGATTACCACATTTCTAGtacaaaagaggagaaagaacttCCAAGACTGAAACTGAGA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18666384 561 + 33263144 CAAAAAACATTCTCAAAGGG------TAATAGGTTTTGAGGAATATTCCGCTCCTTCCCACTTATTaaagaa------aaaacaaaaaataaaaaataa-------aaataaaaagcaaataaaa--------aCCACCTTTCAGCTGCCTCAGGGTTTTGGCTCCCCCTC-AGACATGTTGAAACAGCTCCTTCCTGCT--TACAAAATCTCCAAGTAAGGTCTACAAGTCTCACACTCAAGGTAGGCCCCATGCAGGT--------ACTTTCACTCTCCCTACCTAATA--TTCCCACTGTGTGTGCTCTGGGCTTAGTTACCTGCCGTAGTGGGGTTTCTTC--CTCTTAGGGTACAAATAGAATCACTTTTCCTTTTCTTCCACACTGAACGCATGCTTTCCGCAGAAGA-------------ACCTTTTCT--CTCCTCCCACCTTAAACTCCCAGCTCACTTAAACCTGGAGAGGTGGGGCAGGTATTCTTCTTGGCCCCACCCAAACCTTTTCTTTTTCTCTACAGAGAACCT--CTCTGCTTCTTCTGAAGGCAAGATTACCACATTTCTAGTACAAAAGAGGAGAAAGAACTTCCAAGACTGAAACTGAGA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198374460 553 + 210400635 cacaaAACATTCTCAAAGGG------TAATATGTTTTGAGGAATATTCCACTCCTT-CCACTCATTAAAGAA------AAAATAAAACA-----------------AAATAAAAAGCAAACAAAA--------ACCACCTTCCAGCTGCCTCAGGG-TTTGATTCCCCCTCAAGACATGTTGAAACAGCTCCTTTCTCTTTATATAAAATCTCCAAGTAAGGTCTACAAGTCTCACACTCAAAGTAGGCCCCATGCAGGT--------ACTTTGACTCTCCCTAGTTAATAC-TTCCCACTATATGTGCTCTGGGCTTAATTATCTGCCATAGTGGGGTTTCTTT--CTCTTAGGGTAGAAACAGAATCACTTTTCCTTTACTTCCACACTAAACACATGCTTTCCACGGAAGA-------------GCCTTTTCT--CTCCGCCCACTTTAAACTCCCAGCTCATTTAAAGTTGGAGAGGTGGAGCAGGTATTCATCTTGGCCTCACCCAAACCTTTTCTTTTTCTTTACAtaaaacct--ctctgcttcttctgaaggcaagattaccacatttctagtacaaaagaggagtaagaacttctaagcctgaaactaaga i calJac3.chr1 C 0 C 0 s mm10.chr15 77204920 478 + 104043685 TATACAATATGCTCAAAATGTTGGCTTGGGGGGGGGGGAGGGATATTCTGCTTGGT-TAACTTATTAAAAGA------AAATCAAAGCA-----------------AAATTGAAAACAAACAAAC--------AGAGCCTTTCACCTGCTTCAGGGTTTACGTTCCCTCCC-TGACACGTTTAAACAGCTCCCTCCAGCT--TGGGAAATCTCTGAATAAGGGCTGCAAG--TCACAGGCAAGGCAAG---------------------------CTCTCCCTG---------GCACCTGTGTCCGTTTTCT--------------------CTGAGAGTCCAGC--CTCTCAGA-------------TGCTCTCCCTTCGCTTCCGCCCTGAACACG----GCCCGCAGG-GA-------------GCCTAGTCTGCTCCCTTCCTCTCTGA----CCAGATTTATCAGGCTTGGTGA-GCAGGGCAGG----ATTCTCAGCTTTA---GAGTCTTTTCTGTTCTTCC-CACAGAACCTTCCTCTGCTTC--CTGAGGACAAAGCTGCCCC-TTTCTAGTATACATGCAGAGTAAGGACTTCTAAGCTTAAAGCCAGGA i mm10.chr15 C 0 I 393 s canFam3.chr10 40987243 565 - 69331447 ---CATACATTCTCAAAGCA------TTCCGTGTTTGGGGGAATATTTCACTCCTT-TAACTCGTTGAA--A------AAAACAACATG-----------------AAACCAAAAAAAAAAAAAAAGGAGGCTACCATCTTCCAGCTGCCTCAGGGTTCTG--TTCCCCTC-AGACATGTTGAAACAGCTCTCTCCTGCC--TGTAAAATCTCCCAGAAAGGTCTACAAGCCTCACCCTTAAGGCAGGCCTTGTGCAGGTATAGGTTCACTTGCTTCCCCCCTCCCTCATTCTTCCCCATTGTA-ATGCCCCTGTATTAGCCATCTGCTACA---GAATTCCTTTTACTCTTAGGGTAGAAGTCAAGGCACTTCTCCCTTTCCTCCTTGCT----CTGTGCCTTCTGCCAGAGAGCTTATAATAAATACCTTTTCT--CTCCTTCCACCTTAAACTACCAGCTCATTTAAACTTGGAGAGGTGGGGCAGGTAT---TCTTGGCCTCACCCAAACCTTTTCTTTTTCTTTATGCAGAACCT--CTCTGCTTCCTCTGATGGCAAGATTACCTCACTTCCAGTATAAAAGAGGAATAAGAACTTCCAAGTCTCAACTTGAGA i canFam3.chr10 C 0 C 0 a score=741044.000000 s hg38.chr22_KI270876v1_alt 217859 230 + 263666 TAGCCTGTTTTCTAAATAAAAGAAAAAAAGAAAAATAAATCTTGACTTTCCATAAAGTGTTACTTAGACTCTTTTACATGTCCATAATCAGTTTTTATACACAACTTTCCTCTCTAGTTACATGGCTCATGCCCTAAATCTTAAGTCACCAACACTCCCCATACCATACTGTAAATAACTATATT-AAAATTACACTGATAAGAGATT--CATTTTTTCAAATTCTTTGAAGA s panTro4.chr22 34597605 229 + 49737984 TAGCCTGTTTTCTAAATAAAAGAAAAAA-GAAAAATAAATCTTGACTTTCCATAAAGTGTTACTTAGACTCTTTTACATGTCCATAATCAGTTTTTATACACAACTTTCCTCTCTAGTTTCATGGCTCATGCCCTAAATCTTAAGTCACCAACACTCCCCATACCATACTGTAAATAACTATATT-AAAATTACACTGATAAGAGATT--CATTTTTTCAAATTCTTTGAAGA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31017436 229 + 46535552 TGGCCTGTTTTCTAAATAAAAGAAAGAA-GAAAAATAAATCTTGACTTTCCGTAAAGTGTTACTTAGAATCTTTTACATGTCCATAATCAGTTTTTATACACAACTTTCCCCTCTAGTTTCATAACTCATGCCCTAAATCTTAAGTCACCAACACTCCCTATACCATACTCTAAATAACTATATT-AAAATTACACTGATAAGAGATT--CATTTTTTCAAATTCTTTGAAGA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100570980 229 - 115148730 TGGCTTGTTTTCTAAATAAAAGAAAAAA-GAAAAATAAGTCTTGACTTTCCATAAAGTGTTACTTAGACTCTTTTACATGTCCATAATCAGTTTTTATACACAACTTTCCTCTCTAGTTTCATAGCTCATGCCCTAACTCTTAAGTCACCAACACTCCCTATACCATACTCTAAATAACTATATT-AAAATTACACTGATAAGAGATT--CATTTTGTCAAATTCTTTGAAGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80715321 224 + 95678458 CAGCCCGTTTTCTAAATAAAA-----AA-GAAAAATAAATCTTGACTTCCCATAAAATGTTACTTAGACTCTTTTACATGTCCATAATCAGTTTTTAAACACAATTTCCCTCTCTAGTTTCACAGCTCATGCCCTAAATCTTAAGTCACCAACACTCCCTATACTATACTCTAAATAACTATATT-AAAATTACACTGACAAGAGATT--CATTTTTTCGAACTCTTTGAAGA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81141883 224 - 96509753 CAGCCCGTTTTCTAAATAAAA-----AA-GAAAAATAAATCTTGACTTCCCATAAAATGTTACTTAGACTCTTTTACATGTCCATAATCAGTTTTTAAACACAATTTCCCTCTCTAGTTTCACAGCTCATGCCCTAAATCTTAAGTCACCAACACTCCCTATACTATACTCTAAATAACTATATT-AAAATTACACTGACAAGAGATT--CATTTTTTCAAACTCTTTGAAGA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76397987 224 + 90941950 CAGcctgttttctaaataaaa-----aa-gaaaaataaatcttgactTTCCATAAAATGTTACTTAGACTCTTTTACATGTCCATAATCAGTTTTTAAACACAACTTCCCTCTCTAGTTTCATAGCTCATGCTCTAAATCTTAAGTCACCAACACTCCCTCTACTATACTCTAaataactatatt-aaaattacaCTGACAAGAGATT--CATTTTTTCGAACTCTTTGAAGA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18666945 224 + 33263144 CAGCCTGTTTTCTAAATAAAA-----AA-GAAAAATAAATCTTGACTTTCCATAAAATGTTACTTAGACTCTTTTACATGTCCATAATCAGTTTTTAAACACAACTTCCCTCTCTAGTTTCACAGCTCATGCCCTAAATCTTAAGTCACCAACACTCCCTATACTATACTCTAAATAACTATATT-AAAATTACACTGACAAGAGATT--CATTTTTCCGAACTCTTTGAAGA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198375013 219 + 210400635 cagcctattttctAAATAAAA-----AA-GGAAAATTAATCTTGACTTTCCACAAACTATAACTTAGACTCTTTTATATGTCCATAATCAGTTTTTATATACAACTTTCCTCTCTAGTTTCACAGCTTCTGCCCTAAATCTTAAGTC----AGATCCCCTATACTATACTCTAAATAACTATATT-AAAATTACAGTGATAAGAGATT---AGTTTTTCAAACCCTTTGAAGA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40987808 206 - 69331447 CAGCCTTTTTTT----TAAAA-----TG-GGAAAACAAATCTTGACTTTCTATAAATTGTTAC----------------ATCCataataaatttttatataaaaCTTTCCCCTCTAGTCTCATAGCCCATGCCCTAAATCTTAGGTCAAAGAC-CTCCCTATACTCGGTTCTTAATAACTATATTAAAAATCACACTGTTAAGCCATTACAGTCCTTCCAAACTCTTTGAAAA i canFam3.chr10 C 0 I 12 e mm10.chr15 77205398 393 + 104043685 I a score=56498.000000 s hg38.chr22_KI270876v1_alt 218089 29 + 263666 GTC-TTTTATTACTCGACACTCATTCTTTT s panTro4.chr22 34597834 29 + 49737984 GTC-TTTTATTACTCGACACTCATTCTTTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31017665 27 + 46535552 GTC-TGTTATTACTTGACACTCAT--TTTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100571209 29 - 115148730 GTC-TGTTATTACTTGACACTCATTCTTTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80715545 25 + 95678458 GTC-TGTTATTACTCGACACTCATTC---- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81142107 25 - 96509753 GTC-TGTTATTACTCGACACTCATTC---- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76398211 27 + 90941950 GTC-TGTTATTACTCgacactcattc--tt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18667169 26 + 33263144 GTC-TGTTATTACTCGACACTCATTC---T i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198375232 29 + 210400635 GTCTTATTATTACT-GACTCTCATTCAttc i calJac3.chr1 C 0 C 0 e mm10.chr15 77205398 393 + 104043685 I e canFam3.chr10 40988014 12 - 69331447 I a score=3120161.000000 s hg38.chr22_KI270876v1_alt 218118 1300 + 263666 TTTTTCTTTTT-AACCTCAAATGTTTTAATGGTGGGATCTTATTCACTGTGTACAGGATTCTCTAAAGAGACCACCTGGCTGGGTGCTCAAACCACACGGGCTGACCCAAAAGACACCAAAACCAAGAGTTGCTCGGGAGGCACTAAATGTTGACGGTCTTGGCCAGCTTCACATCCTCAATTTCAGCAGACAGCCAGCAGTAAGTGTGATGAAGCCGCAGCACCTCAATGGCCTTGAGTTCCAGTGGTGTTGCCTGAATACCAAGGTCTTCTAAGCTGGGCAGGTGAGACAAGGTCATGTCTGTGATGTGAATACGCTCCACTTTATCCCTTGTTGTCCAGGACTCAAATGGGCTTATTTCAAAGTCTCTTGCTACCCACTGATAGGCAAAAGGTGGCAAGGGGTACGGGAGGAAGTACCCCTTTGCTGTGAGCCACAGCAAAGATGTACTTCACCAGGTCAAAGAGGAGATATCGATTTGGCCCAACGAAAGCAAAGGTTTTCCCATTGGCATCAGGATCCTTAACTGCATTAACAATTCCTTTGGATACATCTACGACGTATACTGGTTGTTTAACTGCCTTCCAGCCCAAGGAAAC-AAGGGGTATAGCACCAAACCAACACATATTTGCAAAATAATTAAGGAATCTATCCTCTCTTCCAAAGATGTCCAACAGCTTTACGATAATGGCTTCTGGAAATGTGTCTCTCACTGCTTTCTCTCCAACAGCCTTCTTTCTCAAATATCTAGAAGAGCTTTTAATATTCACATTCAGATGTGCAACATGAATGAATTTTCCAACTTCAGCTTCCTTGGACACCTGAGCAATTGCTTGGGGAATCTTCACAAAAACATCCTCAAAATCAAAGTTTTTGGTTTCCCAGTCTCGTCCAACAAGATTTATGACCACATTGCTGTGTTCCACTACTCGTCAGATAGAATCTTTATCTCTCGCGTCCCATTCCAGAAACAGAAGCTAGCCCAGGTCTCCCATGGGACGAAGGTGCATGATGTCACATGTATCACACCGATAGGGTATGATCACCTGTGACCCCACGCGTCCAAGGTGGTTGACAACACATCGGCCCAGGAATCCTGTTGCTCCAAACCCAGTGGCCACAATCCCACTGACTTGAGGAACATTCACCTTTCCCATGAGGTATGAGGGCATGATGAAGCTGGCAATGGAGTGGGCTGTGACACACGGATGTGGCTATTGCAGTAATGGCAGAATGTGACATTGGCAGGGCCCAGACAACCCGGGATTGTGCAGCGGCCGCCATCTTCTCCCACAATCC----t s panTro4.chr22 34597863 1303 + 49737984 TTTTTTTTTTT-AACCTCAAATGTTTTAATGGTGGGATCTTATTCACTGTGTACAGGATTCTTTAAAGAGACCACCTGGCTGGGTGCTCAAACCACACGGGCTGACCCAAAAGACACCAAAACCAAGAGTTGCTCGGGAGGCACTAAATGTTGACGGTCTTGGCCGGCTTCACATCCTCAATTTCAGCAGACAGCCAGCAGTAAGTGTGATGAAGCCGCAGCACCTCAATGGCCTTGAGTTCCAGTGGTGTTGCCTGAATACCAAGGTCTTCTAAGCTGGGAAGGTGAGACAAGGTCATGTCTGTGATGTGAATACGCTCCACTTTATCCCTTGTTGTC-AGGACTCAAGTGGGCTTATTTCAAAGTCTCTTGCTACCCACTGATAGGCAAAAGGTGGCAAGGGGTACGGGAGGAAGTACCCCTTTGCTGTGAGCCACAGCAAAGATGTACTTCACCAGGTCAAAGAGGAGGTACCGATTTGGCCCAACGAAAGCAAAGGTTTTCCCATTGGCATCAGGATCCTTAACTGCATTAACAATTCCTTTGGATACATCTACGACATACACTGGTTGTTTAACTGCCTTCCAGCCCAAGGAAAC-AAGGGGTATAGCACCAAACCAACACATATTTTCAAAATAATTAAGGAATCTATCCTCTCTTCCAAAGATGTCCAACAGCTTTACGATAATGGCTTCTGGAAATGTGTCTCTCACTGCTTTCTCTCCAACAGCCTTCTTTCTCAAATATCTAGAAGAGCTTTTAATATTCACATTCAGATGTGCAACATGAATGAATTTTCCAACTTCAGCTTCCTTGGACACCTGAGCAATTGCTTGGGGAATCTTCACAAAAACATCCTCAAAATCAAAGTTTTTGGTTTCCCAGTCTCATCCAACAAGATTTATGACCACATTGCTGTGTTCCACTACTCGTCGGATAGAATCTTTATCTCTCGCGTCCCATTCCAGAAACAGAAGCTAGCCCAGGTCTCCCATGGGACGAAGGTGCATGATGTCACATGTATCACACCGATAGAGTATGATCACCTGTGACCCCACGCGTCCAAGGTGGTTGACAACACATCGGCCCAGGAATCCTGTTGCTCCAAACCCAGTGGCCACAATCCCACTGACTTGAGGAACATCCACCTTTCCCATGAGGTATGAGGGCATGATGAAGCTGGCAATGGAGTGGGCTGTGACACATGGATGTGGCTATTGCAGTAATGGCAGAATGTGACATTGGCAGGGCCCAGACAACCCGGGATTGTGCAGCGGCCGCCATCTTCTCCCACAATCCttttt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31017692 1293 + 46535552 TTTTTTTTTTT-AACCTCAAATGTTTTAATGGTGGGATCTTATTCACTGTGTACAGGATTCTCTAAAGAGACCACCTGGCTGGGTGCTCAAACCACATGGGCTGACCCAAAAGACACCAAAACCAAGAGTTGCTCGGGAGGCACTAAATGTTGACAGTCTTGGCCGGCTTCACATCCTCAATTTCAGCAGACAGCCAGAAGTAAGTGTGATGAAGCCACAGCACCTCAATGGCTTTGAGTTCCAGTGGTGTTGCCTGAATACCAAGGTCTTCTAAGCTTGGCAGGTGAGACAAGGTCATGCCTGTGATGTGAATACGCTCCACTTTATTCCTTGTTGTCCAGGACTCAAATAGGCTTATTTCAAAGTCTCTTGCTACCCACTGATAGGCAAAAGGTGGCAAGGGGTATGGGAGGAAGAGT-------CTGTGAGCCACAGCAAAGATGTACTTCACCAGGTCAAAGAGGAGGTACCGATTTGGCCCAACGAAAGCAAAGGTTTTCCCGTTGGCATCAGGTTCCTTAACTGCATTAACAATTCCTTTGGATACATCTACAACATATACTGGTTGTTTAACTGCCTTCCAGCCCAAGGAAAC-AAGGGGTATAGCGCCAAACCAACACATATTTGCAAAATAATTAAGGAATCTATCCTCTCTTCCACAGATGTCCAACAGCTTTACGATAATGGCTTCTGGAAATGCATCTCTCATTGCTTTCTCTCCAACAGCCTTATTTCTCAAATATCTAGAAGAGCTTTTAATATTCACATTCAGATGTGCAACATGAATGAATTTTCCAACTCCAGCTTCCTTGGACACCTGAGCAATTGCTTGGGGAATCTTCACAAAAACATCCTCAAAATCAAAGTTTTTGGTTTCCCAGTCTCGTCCAACAAGATTTATGACCACATTGCTGTGTTCCACTACTCATTGGATAGAATCTTTATCTCTTGCGTCCCATTCCAGAAACAGAAGCTAGCCCAGGTCTCCCATGGGACGAAGGTGCATGATGTCACATGTATCACACCGATAGGGTATGATCACCTGTGACCCCACGCGTCCAAGGTGGTTGACAACACATCATCCCAGGAATCCTGTTGCTCCAAACCCAGTGGCCACAATCCCACTGACTTGAGGAACATCCACCTTTCCCATGAGGTATGAGGGCATGATGAAGCTGGCAATGGAGTGGACTGTGACACACGGATGTGGCTATTGCAGTAATGGCAGAATGTGACATTGGCAGGGCCCAGACAACCCGGGATTGTGCAGCGGCCGCCA---TCTCCCACAATCC-CCCt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100571238 1293 - 115148730 TTTTTTTTTTTAAACCTCAAATGTTTTAGTGGTGGGATCTTATTCACTGTGTACAGGATTCTCTAAAGAGACCACCTGGCTGGGTGCTCAAACCACATGGGCTGACCCAAAAGACACCAAAACCAAGAGTTGCTCGGGAGGCACTAAATGTTGACGGTCTTGGCCGGCTTCACATCCTCAATTTCAGCAGACAGCCAGCAATAAGTGTGATGAAGCTGCAGCACCTCGATGGCCTTGAGTTCCAGTGGTGTTGCCTGAATACCAAGGTCTTCTAAGCTGGGCAGGTGAGACAAGGTCATGCCTGTGATGTGAATATGCTCCACTTTATCCCTTGTTGTCCAGGACTCAAATGGGCTTATTTCAAAGTCTCTTGCTACCCACTGATAGGAAAAAGGTGGCAAGGGGTACGGGGGGAAGAGT-------CTGTGAGCCACAGCAAAGATGTACTTCACCAGGTCAAAGAGGAGGTACCGATTTGGCCCAACAAAAGCAAAGGTTTTCCCGTTGGCATCAGGATCCTTAACTGCATTAACAATTCCTTTGGATACATCTACGACATATACTGGTTGTTTAACTGCCTTCCAGCCCAAGGAAAC-ATGGGGTATAGCACCAAACCAACACATATTTGCAAAATAATTAAGGAATCTATCCTCTCTTCCAAAGATGTCCAACAGCTTTACGATAATGGCTTCTGGAAATGCATCTCTCACTGCTTTCTCTCCAACAGCCTTATTTCTCAAATATCTAGAAGAGCTTTTAATATTCACATTCAGATGCGCAACATGAACGAATTTTCCAACTTCAGCTTCTTTGGACACCTGAGCAATTGCTTGGGGAATCTTCACAAAAACATCCTCAAAATCAAAGCTTTTGGTTTCCCAGTCTCATCCAACAAGATTTATGACCACATTGCTGTGTTCCACTACTCGTCGGATAGAATCTTTATCTCTCACATCCCATTCCAGAAACAGAAGCTAGCCCAGGTCTCCCATGGGACAAAGGTGCATGATGTCACATGTATCACACCGATAGGGTATGATCACCTGTGACCCCACGTATCCAAGGTGGTTGACAACACATTGGCCCAGGAATCCTGTTGCTCCAAACCCAGTGGCCACAATCCCACTGATTTGAGGAACATCCACCTTTCCCATGAGGTATGAGGGCATGATGAAGCTGGCAATGGAGTGGGCTGTGACACACGGATGTGGCTATTGCAGTAATGGCAGAATGTGACATTGGCAGGGCCCAGACAACCCGGGATTGTGCAGCAGCCGCCATCTTCTCCCACAATCC----- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80715570 1280 + 95678458 TTTTTTTTTTA-AACCTC---------AATGGTGAAATCCTATTCACTGTGTACAGGATTCTCTAAAGAGACCACCTGGCTAGGTGCTCAAACCACATGGGCTGACCCAAAAGACACCAAAACCAAGAGTTACTCAGGAGGCACTAAATGGTGACGGTCTTGGCCGGTTTCACATCCTCAATTTCAGCAGCCAGCCAGCAGTAAGTGCGCTGACGCCGCAGCACCTCGATGGCCTTGAGTTCCAGTGGTGGTGCCTGAATACCAAGGTCTTCTAAGCTGGGCAGGTGAGACAATGTCACGTCTGTGATGTGAATCCGCTCCACTTTATCCCTTGTTGTCCAGGGCTCAAATGGGCTTATTTCAAAGTCTCTTGCTACCCACTGATAGGCAAAACGTGGCAAGGGGTACGGGAGGAAGAGT-------CTGTGAGCTACAGCAAAGATGTACTTCACCAGGTCAAAGAGGAGGTACCCATCTGGCCCAATGAAAGCAAAGGTTTTCCCACGGGCATCAGGATCCTTAACTGCATTAACAATTCCTTTGGATACATCTACGACATAG--CGGTTGTTTAACTGCCTTCCAGCCCAAGGAAAC-AAGGGGTATAGCACCAAACCAACACATATTTGCAAAATAATTAAGGAATCTATCCTCTCTTCCAAAGATGTCCAACAGCTTTATGATAATGGCTTCTGGAAATGCATCTCTCACTGCTTTCTCTCCAACAGCCTTATTTCTCAAATACCTAGAAGAGCTTTTAATATTCGCATTCAGATGCGAAACATGAATGAATTTTCCAACTTCGACTTCCTTGGACACCTGAGCAATTGCTTGGGGGATCTTCACAAAAACATCCTCAAAATCAAAGCTTTTGATTTCCCAGTCTCATCCAACAAGATTGATGACCACATTGCTGTGTTCCACTGCTCGTCGGATAGAATCTTTATCTCTCGCGTCCCATTCCAGAAACAGAAGCTAGCCCAGGTCACCCATGGGACGAAGGTGCATGATGTCATACGTATCACACCGATAGGGAATGATCACCTGTGACCCCATACGTCCAAGGTGGTTGACAACACATTGGCCCAGGAATCCTGTTGCTCCAAACACAGTGGCCACAATCCCACTGAC-TGAGGAACGTCCACCT----CATGAGGTATGAGGGCATGATGAAGCTGGCAATGGAGTGGGCCGTGACACACAGATGTGGCTATTGCAGTAATGGCAGAACATGACATTGGCAGGGCCCGGG-AACCCAGGATTGTGCAGCAGCCACCATCTTCTCCCACAAttcttttt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81142132 1280 - 96509753 TTTTTTTTTTA-AACCTC---------AGTGGTGGAATCCTATTCACTGTGTACAGGATTCTCTAAAGAGACCACCTGGCTAGGTGCTCAAACCACATGGGCTGACCCAAAAGACACCAAAACCAAGAGTTACTCAGGAGGCACTAAATGGTGACGGTCTTGGCCGGTTTCACATCCTCAATTTCAGCAGCCAGCCAGCAGTAAGTGCGCTGACGCCGCAGCACCTCGATGGCCTTGAGTTCCAGTGGTGGTGCCTGAATACCAAGGTCTTCTAAGCTGGGCAGGTGAGACAATGTCACGTCTGTGATGTGAATCCGCTCCACTTTATCCCTTGTTGTCCAGGGCTCAAATGGGCTTATTTCAAAGTCTCTTGCTACCCACTGATAGGCAAAACGTGGCAAGGGGTACGGGAGGAAGAGT-------CTGTGAGCTACAGCAAAGATGTACTTCACCAGGTCAAAGAGGAGGTACCCATTTGGCCCAATGAAAGCAAAGGTTTTCCCACGGGCATCAGGATCCTTAACTGCATTAACAATTCCTTTGGATACATCTACGACATAA--CGGTTGTTTAACTGCCTTCCAGCCCAAGGAAAC-AAGGGGTATAGCACCAAACCAACACATATTTGCCAAATAATTAAGGAATCTATCCTCTCTTCCAAAGATGTCCAACAGCTTTATGATAATGGCTTCTGGAAATGCATCTCTCACTGCTTTCTCTCCAACAGCCTTATTTCTCAAATACCTAGAAGAGCTTTTAATATTCGCATTCAGATGCGAAACATGAATGAATTTTCCAACTTCGACTTCCTTGGACACCTGAGCAATTGCTTGGGGGATCTTCACAAAAACATCCTCAAAATCAAAGTTTTTGATTTCCCAGTCTCATCCAACAAGATTGATGACCACATTGCTGTGTTCCACTACTCGTCGGATAGAATCTTTATCTCTCGCGTCCCATTCCAGAAACAGAAGCTAGCCCAGGTCACCCATGGGACGAAGGTGCATGATGTCATACGTATCACACCGATAGGGAATGATCACCTGTGACCCCATGCGTCCAAGGTGGTTGACAACACATTGGCCCAGGAATCCTGTTGCTCCAAACACAGTGGCCACGATCCCACTGAC-TGAGGAACGTCCACCT----CATGAGGTATGAGGGCATGATGAAGCTGGCAATGGAATGGGCCGTGACACACAGATGTGGCTATTGCAGTAATGGCAGAACATGACATTGGCAGGGCCCGGG-AACCCAGGATTGTGCAGCAGCCACCATCTTCTCCCACAATCCTTTTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76398238 1281 + 90941950 tttttttttta-aacctc---------aatgGTGGAATACTATTCACTGTGTACAGGATTTTCTAAAGAGACCACCTGGCTAGGTGCTCAAACCACATGGGCTGACCCAAAAGACGCCAAAACCAAGAGTTACTCAGGAGGCACTAAATGGTGACGGTCTTGGCCGGTTTCACATCCTCAATTTCAGCAGCCAGCCAGCAGTAAGTGCGCTGACGCCGCAGCACCTCGATGGCCTTGAGTTCCAGTGGTGGTGCCTGAATACCAAGGTCTTCTAAGCTGGGCAGGTGAGACAATGTCACGTCTGTGATGTGAATCCGCTCTACTTTATCCCTTGTTGTCCAGGGCTCAAATGGGCTTATTTCAAAGTCTCTTGCTACCCACTGATAGGCAAAACGTGGCAAGGGGTACGGGAGGAAGAGT-------CTGTGAGCTACAGCAAAGATGTACTTCACCAGGTCAAAGAGGAGGTACCCATTTGGCCCAATGAAAGCAAAGGTTTTCCCAAGGGCATCAGGATCCTTAACTGCATTAACAATTCCTTTGGATACATCTACGACATAG--CGGTTGTTTAACTGCCTTCCAGCCCAAGGAAACAAAGGGGTATAGCACCAAACCAACacatatttgcaaaataattaaGGAATCTATCCTCTCTTCCAAAGATGTCCAACAGCTTTATGATAATGGCTTCTGGAAATGCATCTCTCACTGCTTTCTCTCCAACAGCCTTATTTCTCAAATACCTAGAAGAGCTTTTAATATTCGCATTCAGATGCGAAACATGAATGAATTTTCCAACTTCGACTTCCTTGGACACCTGAGCAATTGCTTGGGGGATCTTCACAAAAACATCCTCAAAATCAAAGTTTTTGATTTCCCAGTCTCATCCAACAAGACTGATGACCACATTGCTGTGTTCCACTACTCGTCGGACAGAATCTTTATCTCTCGCGTCCCATTCCAGAAACAGAAGCTAGCCCAGGTCACCCATGGGACGAAGGTGCATGATGTCATATGTATCACACCGATAGGGAATGATCACCTGTGACCCCATGCGTCCAAGGTGGTTGACAACACATTGGCCCAGGAATCCTGTTGCTCCAAACACAGTGGCCACGATCCCACTGAC-TGAGGAACGTCCACCT----CATGAGGTATGAGGGCATGATGAAGCTGGCAATGGAGTGGGCCGTGACACACAGATGTGGCTATTGCAGTAATGGCAGAACATGACATTGGCAGGGCCCAGG-AACCCAGGATTGTGCAGCAGCCACCATCTTCTCCCAcaatccttttt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18667195 1289 + 33263144 TTTTTTTTTTA-AACCTCAAATGTTTTAATGGTGGAATCTTATTCACTGTGTACAGGATTCTCTAAAGAGACCACCTGGCTAGGTGCTCAAACCACATGGGCTGACCCAAAAGACGCCAAAACCAAGAGTTACTCAGGAGGCACTAAATGGTGACGGTCTTGGCTGGTTTCACATCCTCAATTTCAGCAGCCAGCCAACAGTAAGTGCGCTGACGCCGCAGCACCTCGATGGCCTTGAGTTCCAGTGGTGGTGCCTGAATACCAAGGTCTTCTAAGCTGGGCAGGTGAGACAATGTCACGTCTGTGATGTGAATCCGCTCCACTTTATCCCTTGTTGTCCAGGGCTCAAATGGGCTTATTTCAAAGTCTCTTGCTACCCACTGATAGGCAAAACGTGGCAAGGGGTACGGGAGGAAGAGT-------CTGTGAGCCACAGCAAAGATGTACTTCACCAGGTCAAAGAGGAGGTACCCATTTGGCCCAATGAAAGCAAAGGTTTTCCCACGGGCATCAGGATCCTTAACTGCATTAACAATTCCTTTGGATACATCTACGACATAG--TGGTTGTTTAACTGCCTTCCAGCCCGAGGAAAC-AAGGGGTATAGCACCAAACCAACACATATTTGCAAAATAATTAAGAAATCTATCCTCTCTTCCAAAGATGTCCAAAAGCTTTATGATAATGGCTTTTGGAAATGCATCTCTCACTGCTTTCTCTCCAACAGCCTTATTTCTCAAATACCTAGAAGAGCTTTTAATATTCGCATTCAGATGCGAAACATGAATGAATTTTCCAACTTCGACTTCCTTGGACACCTGAGCAATTGCTTGGGGGATCTTCACAAAAACATCCTCAAAATCAAAGTTTTTGATTTCCCAGTCTCATCCAACAAGATTGATGACCACATTGCTGTGTTCAACTACTCGTCGGATAGAATCTTTATCTCTCGCGCCCCATTCCAGAAACAAAAGCTAGCCCAGGTCACCCATGGGACGAAGGTGCATGATGTCATATGTATCACACCAATAGGGAATGATCACCTGTGACCCCATGCGTCCAAGGTGGTTGACAACACATTGGCCCAGGAATCTTGTTGCTCCAAACACAGTGGCCATGATCCCACTGAC-TGAGGAACGTCCACCT----CATGAGGTATGAGGGCATGATGAAGCTGGCAATGGAGTGGGCCGTGACACACAGATGTGGCTATTGCAGTAATGGCAGAACATGACATTGGCAGGGTCCGGG-AACCCAGGATTGTGCAGCAGCCACCATCTTCTCCCACAATCCTTCTt i chlSab2.chr19 C 0 C 0 e mm10.chr15 77205398 393 + 104043685 I e canFam3.chr10 40988014 12 - 69331447 I e calJac3.chr1 198375261 0 + 210400635 C a score=923921.000000 s hg38.chr22_KI270876v1_alt 219418 310 + 263666 tttttttttttt--------------tttttttttctgagacagggtctcactctgtagccc--aggctgcagtgcagtggcgtgatctcgactcatcgcaacctctgcctcccaggctcaagcgatcctctcacctcagcctccagagtagctgggaccacaggcacacgccaccacgcctggctaatttttttgtatttttggtagaaacggggtttcactatgttgcccaggttggtcttgaactcctgacctcaagcgatccacctgcctgggcctcccaaagtgtgggattacaagcatgagccaccatgaccA-CTGGCAG s panTro4.chr22 34599166 310 + 49737984 tttttttttttt--------------tttttttttctgagacagggtctcactctgtagccc--aggctgcagtgcagtggcgtgatctcgactcatcgcaacctctgcctcccaggctcaagcgatcctcccacctcagcctccagagtagctgggaccacaggcacacgccaccacgcctggctaatttttttgtatttttggtagaaacggggtttcactatgttgcccaggttggtcttgaactcctgacctcaagcgatccacctgcctgggcctcccaaagtgtgggattacaagcatgagccaccatgaccA-CTGGCAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31018985 310 + 46535552 tttttttttttt--------------tttttttttctgagacagggtctcactccgtagccc--aggctgcagtgcagtggcgtgatctcggctcatcacaacctctgcctcccaggctcaagcgatcctcccacctcagcctccagagtagctgggaccacaggcgcacgccaccacacctagttaagttttttgtatttttgatagaaacggggtttcactatgttgcccaggttggtctcgaactcctgacctcaagcgatccacctgcctgggcctcccaaagtgtgggattacaggcatgagccaccatgaccA-CTGGCAG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100572531 310 - 115148730 tttttttttttt--------------ttttttttcctgagatagggtctcactctgtagccc--aggctgcagtgcagtggcatgatctcagctcatcgcaacctctgcctcccaggctcaagcgatcctcccacctcagactccagagtagctgggaacacaggcgcatgccaccacgcctggctaatttttttatatttttggtagaaatggggtttcactatgttgcccaggttggtctcgaactcctgacctcaagcgatccacctgcctgggcctcccaaagtgtgggattacaggcatgagccaccatgaccA-CTGGCAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80716850 324 + 95678458 ttgttttcttttttgttttttttgttttttgttttttgagaca-ggtctca-tctgtagcccagaggctgcagtgcagcggcgtgatcgcagctcatcgcaacctctgcctcccaggctcaagtgatcctcccacctcagactccagagtagctgggaccacaggcgcacgccaccatgcctggctaattttgttgtatttttggtagagacggggtttcactatgttgcccaggttggtctcaaactcctgacctcaagttatccacctgcctgggcctcccaaagtgtgggattacagtcatgagccaccatgaccA-CTGGCAG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81143412 323 - 96509753 TTGTTttctttttt-ttgtttttg-tttttgttttttgagaca-ggtctcactctgtagcccagaggccgcagtgcagcggcgtgatcgcagctcatcgcaacctctgcctcccaggctcaagtgatcctcccacctcagactccagagtagctgggaccacaggcgcacgccaccatgcctggctaattttgttgtatttttggtagagacggggtttcactatgttgcccaggttggtctcaaactcctgacctcaagtgatccacctgcctgggcctcccaaagtgtgggattacagtcatgagccaccatgaccA-CTGGCAG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76399519 320 + 90941950 ttgttttcttgt---ttttttttg--ttttgttttttgagaca-ggtctcactctgtagcccagaggctgcagtgcagcggcgtgatcgcGGCTCatcgcaatctctgcctcccaggctcaagtgatcctcccacctcagactccagagtagctgggaccacaggcgcacgccaccatgcctggctaattttgttgtatttttggtagagacggggtttcactatgttgcccaggttggtctcaaactcctgacctcaagtgatccacctgcctgggcctcccaaagtgtgggattacagtcatgagccaccatgacca-ctGGCAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18668484 317 + 33263144 ttgttttctttt---ttgttt-----ttttgttttttgagaca-ggtctcactctgtagcccagaggctgcagtgcagtggcgtgatcgtggctcatcgcaacctctgcctcccaggctcaagtgatcctcccacctcagactccagagtagctgggaccacaggcgcacaccaccatgcctggctaattttgttgtatttttggtagagacagggtttcactatgttgcccaggttggtctcaaactcctgacctcaagtgatccacctgcctgggcctcccaaagtgtgggattacagtcatgagccaccatgaccA-CTGGCAG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198375261 311 + 210400635 tttttttttttt--------------tttttttttttgagacagggtctcattctgtagtcc--aggctggagtgcagtggtgtgatcttggcttatcgcaacctctgcctcccaggctcaagcaatcctcccacctcagcctctagagtagctgggaccacaggtgcacaccaccatgcctggctaatttttctgtatttttggtagagacggggtttcactatgttgcccaggttggtctcaaactcctgacctcaagcaatccacctgcctgggcctcccaaagtgtaggattacaggcataagccactatgcccagccGGCAG i calJac3.chr1 C 0 C 0 e mm10.chr15 77205398 393 + 104043685 I e canFam3.chr10 40988014 12 - 69331447 I a score=388234.000000 s hg38.chr22_KI270876v1_alt 219728 104 + 263666 TCATTCATTCTTAACCAAGTATCAATAAAATAAATACAATGAAATTCTGGATCTTCATACTGTAATTTTATAGTGTTATCTTTTAATCAAGTTTAGGATAGGAT s panTro4.chr22 34599476 104 + 49737984 TCATTCATTCTTAACCAAGTATCAATAAAATAAATACAATGAAATTCTGGATCTTCATACTGTAACTTTATAGTGTTATCTTTTAATCAAGTTTGGGATAGGAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31019295 104 + 46535552 TCATTCATTCTTAACCAAGTATCAATAAAATAAATACAATGAAATTCTGGATCTTCATACTGTAACTTTATAGTGTTAGCTTTTAATCAAGTTTGGGATAGGAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100572841 104 - 115148730 TCATTCATTCTTAACCAAGTATCAATAAAATAAATACAATGAAATTCTAGATCTTCATACTGTGACTTTATAGTGTTCTCTTTTAATCAAGCTTGGGATAGGAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80717174 104 + 95678458 TCATTCATTCTCAACCAAGTATCAATAAAATAAATATAATGAAATTCTGGATCTTCATACTGTAACTTTATAGTGTTATCTTTTAATCAAGTTTGGGATAGGAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81143735 104 - 96509753 TCATTCATTCTCAACCAAGTATCAATAAAATAAATATAATGAAATTCTGGATCTTCATACTGTAACTTTATAGTGTTATCTTTTAATCAAGTTTGGGATAGGAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76399839 104 + 90941950 TCATTCATTCTCAACCaagtatcaataaaataaatataatgaaattctGGATCTTCATACTGTAACTTTATAGTGTTATCTTTTAATCAAGTTTGGGATAGGAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18668801 104 + 33263144 TCATTCATTCTCAACCAAGTATCAATAAAATAAATATAATGAAATTCTAGATCTTCATACTGTAACTTTATAGTGTTATCTTTTAATCAAGTTTGGGATAGGAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198375572 104 + 210400635 TCATTCATTCTTAACCAAGTATCAATAAAATAAATACAATGAAATTTTGGATCTTCATACTATAACTTTATAGTGTTATCTTTTAATCAAGTTTGAGATAGGAT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40988026 98 - 69331447 TCATTCATTCTTAACCAAGTATCAAAGGAACAAATACAATAGAATGTCA------CATATTGTCACTTTATGGTATTATCTTTTAATCAAGTTTGGGATGGGAT i canFam3.chr10 I 12 C 0 e mm10.chr15 77205398 393 + 104043685 I a score=13428.000000 s hg38.chr22_KI270876v1_alt 219832 4 + 263666 AAAG s panTro4.chr22 34599580 4 + 49737984 AAAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31019399 4 + 46535552 AAAG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100572945 4 - 115148730 AAAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80717278 4 + 95678458 AAAG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81143839 4 - 96509753 AAAG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76399943 4 + 90941950 AAAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18668905 4 + 33263144 AAAG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198375676 4 + 210400635 AAAG i calJac3.chr1 C 0 C 0 e mm10.chr15 77205398 393 + 104043685 I e canFam3.chr10 40988124 0 - 69331447 C a score=657884.000000 s hg38.chr22_KI270876v1_alt 219836 350 + 263666 ATAAAAggttgggcgtggtggctcatgcctgtcatcccagcactttgggaggccgaggcgggcagatcacctgaggtcaagaccagcctgaccaacatgagaaaccttgtctctactaaaaatacaaaaattagctgggcatggtggcgcatgcctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacccaggaggcagaggttgcggtgagccgaggtctagccattgcactccagcctgagcaacaagagcaaaattctgtctcaaaaataacataacataacataacataacataacataacataacataacataacataacaaacataaaaa s panTro4.chr22 34599584 311 + 49737984 ATAAAAggttgggcgtggtggctcatgcctgtcatcccagcactttgggaggccgaggcgggcagatcacctgaggtcaagaccagcctgaccaacatgagaaaccttgtctctactaaaaatacaaaaattagctgggcatggtggcgcatgcctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacccgggaggcagaggttgcggtgagccgagatctagccattgcactccagcctgagcaacaagagcaaaattctgtctcaaaaataacataacataacat---------------------------------------aacataaaaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31019403 290 + 46535552 ATAAAAggttgggcgtgatgactcacgcctgtaatcccagcactttgggaggccgaggcaggtggatcacctgaggtcaagaccagcctgaccaacatgagaaaccctgtctctactaaaaatacaaaaattagctgggcatggtggcacatgcctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacccgggaggcggaggttgcggtgagccgagatctagccattgcactccagcctgagcaacaagagcaaaattctgtctcaaaaa--------------at----------------------------------------------aaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100572949 283 - 115148730 ATAAAAggttgggcgtggtggctcatg-ctgtaatcccagcactttgggaggccgaggcaggcagatcacctgaggtcaagaccagcctgaccaacatgagaaaccctgtctctaataaaaatacaaaaattagctgggcatggtggcgcatgcctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacccaggaggcggaggttgcagtgggccaagatctagccattgcactccagcctgagcaacaagagcaaaattctgtctca------------------------------------------------------------------aaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80717282 284 + 95678458 ATAAACggttgggcacggtggctcacgtctataatcccaacactttgggaggtcgaggcgggcagatcacctgaggtcgagatcagcctaaccaacataagaaaccctgtctctactaaaaatacaaaaattagctgggcatggtggcgcatgcctgtaatcccagctactcaggagcctgaggcaggagaattgcttgaactcgggaagcagaggttgtggtgagccgagatccagtcatcgcactccagcctgagcaatgagagcaaaactctgtctct------------------------------------------------------------------aaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81143843 284 - 96509753 ATAAAAggttgggcacggtggctcacgtctataatcccaacactttgggaggtcgaggcgggcagatcacctgaggtcgagaccagcctaaccaacataagaaaccctgtctctactaaaaatacaaaaattagctgggcatggtggcgcatgcctgtaatcccagctactcaggagcctgaggcaggagaattgcttgaactcgggaagcagaggttgtggtgagccgagatccagtcatcgcactccagcctgagcaatgagagcaaaactctgtctct------------------------------------------------------------------aaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76399947 284 + 90941950 ATAaaaggttgggcacggtggctcacgtctgtaatcccaacaccttgggaggtcgaggcgggcagatcacctgaggtcgagaccagcctaaccaacataagaaaccctgtctctactaaaaatacaaaaattagctgggcatggtggcgcatgcctgtaatcccagctactcaggagcctgaggcaggagaattgcttgaacccgggaagcagaggttgcggtgagccgagatccagccatcgcactccagcctgagcaatgagagcgaaactctgtctct------------------------------------------------------------------aaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18668909 284 + 33263144 ATAAAAggttgggtgcggtggcgcacgtctgtaatcccaacactttgggaggtagaggcgggtggatcacctgaggtcgagaccagcctaaccaacatgagaaaccctgtctctactaaaaatacaaaaattagctgggcatggtggtgcatacctgtaatcccagctactcagaagcctgaggcaggagaattgcttgaacccgggaagcagaggttgcggtgagccgagatccagccatcgcactccagcctgagcaatgagagcaaaactctgtctct------------------------------------------------------------------aaa i chlSab2.chr19 C 0 C 0 e mm10.chr15 77205398 393 + 104043685 I e canFam3.chr10 40988124 0 - 69331447 C e calJac3.chr1 198375680 0 + 210400635 C a score=38313.000000 s hg38.chr22_KI270876v1_alt 220186 17 + 263666 ataaaataaaataaaaT s panTro4.chr22 34599895 17 + 49737984 ataaaataaaataaaat i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31019693 17 + 46535552 ataaaataaaataaaaG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100573232 17 - 115148730 ataaaataaaataaaag i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80717566 16 + 95678458 ataaaataaaat-aaag i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81144127 16 - 96509753 ataaaataaaat-aaag i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76400231 16 + 90941950 ataaaataaaat-aaag i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18669193 16 + 33263144 ataaaataaaat-aaag i chlSab2.chr19 C 0 C 0 s mm10.chr15 77205791 17 + 104043685 ATAGGATAAGATAAAAA i mm10.chr15 I 393 C 0 e canFam3.chr10 40988124 0 - 69331447 C e calJac3.chr1 198375680 0 + 210400635 C a score=12285.000000 s hg38.chr22_KI270876v1_alt 220203 3 + 263666 ATA s panTro4.chr22 34599912 3 + 49737984 aTA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31019710 3 + 46535552 ATA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100573249 3 - 115148730 ata i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80717582 3 + 95678458 ata i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81144143 3 - 96509753 ata i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76400247 3 + 90941950 ata i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18669209 3 + 33263144 ata i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198375680 3 + 210400635 ATA i calJac3.chr1 C 0 C 0 s mm10.chr15 77205808 3 + 104043685 ATA i mm10.chr15 C 0 C 0 e canFam3.chr10 40988124 0 - 69331447 C a score=1215795.000000 s hg38.chr22_KI270876v1_alt 220206 353 + 263666 AAAGACATAC-------CCTGCAGCAAAGCAGGAGAAAAATACCAA--GAAAAGAAACCCTCAAAAT----AAAGAAAAGTTTAAATATGTCACAAAAACTCTGCAAACTACCTCTGAAACTCCCATGGGTGGAACCA-CCATAAACTTCTTTGGAACCACAGGAAGGGCTTGTAAATTCCTATTATAAATGCATCTATTTCTTTTCTGATCATAATCTTTAAAATTAGGTGGTCAGTCTGGTCAGAAATAAAACTCTTCT-GTATGTTACCTTTATGAAAACATACAAAAACCAAAAACCCACAGGGAAGCTAA-----GT-TATCTTTTTTATTCATGCTCCTGCATGTTCACATTTTTCTACCTTTaaaac s panTro4.chr22 34599915 353 + 49737984 AAAGACATAC-------CCTGCAGCAAAGCAGGAGAAAAATACCAA--GAAAAGAAACCCTCAAAAT----AAAGAAAAGTTTAAATATGTCACAAAAACTCTGCAAACTACCTCTGAAACTCCCATGGGTGGAACCA-CCATAAACTTCTTTGGAACCACAGGAAGGGCTTGTAAATTCCTATTATAAATGCATCTATTTCTTTTCTGATCATAATCTTTAAAATTAGGTGGTCAGTCTGGTCAGAAATAAAACTCTTCT-GTATGTTACCTTTATGAAAACATACAAAAACCAAAAACCCACAGGGAAGCTAA-----GT-TATCTTTTTTATTCATGCTCCTGCATGTTCACATTTTTCTACCTTTaaaac i panTro4.chr22 C 0 I 1 s ponAbe2.chr22 31019713 353 + 46535552 AAAGACATAC-------CCTGCAGCAAAGGAGGAGAAAAATACCAA--GAAAAGAAACCCTCAAAAT----AAAGAAAAGTTTAAATATGTCACCAAAACTCTGCAAACTACCTCTAAAACTCCCATGGGTGGAACCA-TCATAAACTTCTTTGGAACCACAGGAAGGGCTTGTAAATTCCTATTATAAATGCATCTATTTCTTTTCTGATCACAATCTTTAAAATTAGGGGGTCAGTCTGGACAGAAATAAAACTCTTCT-GTATGTTTCCTTTACGAAAACATACAAAAACCAAAAACCCACAGGGAAGCTAA-----GT-TATCTTTTTCATTCATGCTCCTGCATGTTCACATTTTTCTACCTTTAAAAC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100573252 353 - 115148730 aaaGACATAC-------CCTGCAGCAAAGCAGGAGACAAATACCAA--GAAAAGAAACCCTCAAAAT----AAAGAAAAGTTTAAGTACGTCACAAAAACTCTGCAAACTACCTCTAAAACTCCCATGGGTGGAACCA-TCATAAACTTCTTTGGAACCACAGGAAGGGCTTGTAAATTCCTATTATAAATGCATCTATTTCTTTTCTGATCATAATCTTTAAAATTAGGTGGTCAGTCTGGTCAGAAATAAAACTCTTCT-GTATGTTTCCTTTAAGAAAACATACAAAAACCAAAAACCCACAGGGAAGCTAA-----GT-TATCTTTTTTATTCATGCTCCTGCATGTTCACATTTTTCTGCCTTTAAAAC i nomLeu3.chr7b C 0 I 285 s rheMac3.chr10 80717585 348 + 95678458 aaaCACATAC-------CCTGCAGCAAAGCTGGAGAAAAATACCAA--GAAAAGAAACCCTCAAAAT----AAAGAAAAGTTTAAATATGTCACAAAAACTCTGAAAACTACCTCTAAAACTCCCATGGGTGGAACCA-TCATAAACTTTTTTGGAACCACAGGAAGGGCTTGTAAATTCCTATTGTAAATGCATCCATTCCTTTTCTGATTATAATCTTTAAAATTAGGTGGTCAGTCTGGTTAGAAATAAAACTCTTCT-GTACGTTTCCTTTATGAATACATACAAAAACCAAAAACCCACAGGGAAGC-----------TATCTTTTTTATTCATGCTCCTGCATGTTCACATTTTTCTACCTTTaaaaa i rheMac3.chr10 C 0 I 4 s macFas5.chr10 81144146 348 - 96509753 aaaCACATAC-------CCTGCAGAAAAGCAGGAGAAAAATACCAA--GAAAAGAAACCCTCAAAAT----AAAGAAAAGTTTAAATATGTCACAAAAACTCTGAAAACTACCTCTAAAACTCCCATGGGTGGAACCA-TCATAAACTTTTTTGGAACCACAGGAAGGGCTTGTAAATTCCTATTGTAAATGCATCCATTCCTTTTCTGATTATAATCTTTAAAATTAGGTGGTCAGTCTGGTTAGAAATAAAACTCTTCT-GTACGTTTCCTTTATGAATACATACAAAAACCAAAAACCCACAGGGAAGC-----------TATCTTTTTTATTCATGCTCCTGCATGTTCACATTTTTCTACCTTTaaaaa i macFas5.chr10 C 0 I 5 s papAnu2.chr10 76400250 348 + 90941950 aaacacaTAC-------CCTGCAGCAAAGCAGGagaaaaataccaa--gaaaagaaaccctcaaaat----aaagaaaagtttaaatatgtcacaaaaactctgaaaaCTACCTCTAAAACTCCCATGGCTGGAACCA-TCATAAACTTTTTTGGAACCACAGGAAGGGCTTGTAAATTCCTATTGTAAATGCATCCATTCCTTTTCTgattataatctttaaaattagGTGGTCAGTCTGGTTAGAAATAAAACTCTTCT-GTACGTTTCCTTTATGAATacatacaaaaaccaaaaacccacagGGAAGC-----------TATCTTTTTTATTCATGCTCCTGCATGTTCACATttttctacctttaaaaa i papAnu2.chr10 C 0 I 5 s chlSab2.chr19 18669212 348 + 33263144 aaaCACATAC-------CCTGCAGCAAAACAGGAGAAAAATACCAA--GAAAAGAAACCCTCAAAAT----AAAGAAAAGTTTAAATATGTCACAAAAACTCTGAAAACTACCTCTAAAACTCCCATGGGTGGAACCA-TCATAAACTTTTTTGGAACCACAGGAAGGGCTTGTAAATTTCTATTGTAAATGCATCCATTCCTTTTCTGATTATAATCTTTAAAATTAGGTGGTCAGTCTGGTTAGAAATAAAACTCTTCT-GTACGTTTCCTTTATGAATACATACAAAAACCAAAAACCCACAGGGAAGC-----------TATCTTTTTTATTCATGCTCCTGCATGTTCACATTTTTCTACCTTTaaaaa i chlSab2.chr19 C 0 I 5 s calJac3.chr1 198375683 349 + 210400635 AAAGACATAT-------CCTGCAGCAAAGCAGGAGAAAAATACTGA--GAAAAGAAACCCTCAAAATAAACAAAGAAAAGTTTAA--ATGTCACAAAAACTCTG-AAAGTAGCTCTAAAATTCCTACAGATGGAACCA-TTATAAACTTATTTGGAACTACAGGAA-GGCTTGTAAATTCCTACTATAAACGCATCCATTCCTTTTCTGATCATAATCTTTAAAATTAGGCGGTCAGTCTGGTCCA----CCAACTCTTCTGGTATGTTTCCTTTATGAATACATACAAAAACCAAAAACTCACAGGGAAGCTAA-----GC-TATCTTTTTTATTCATACTCCTGCATGTTCACATTTTTCTACCTTCaaaa- i calJac3.chr1 C 0 I 4 s mm10.chr15 77205811 287 + 104043685 TAA---------------CTGTAGCAA---------------------------------TCAAAATGAAACAAGGAAAGTCTAAATATGTCACAAAAA-TGGGAAAACCACCTTTACAATTATCACAGGTAGAACAACTTAGAAACATCTTTGAAACCATAGGAA---------AAATTTTGTTTTAAATGTATGCAATTCTTTCCTGATTGTAA-CTTTCCAATTAGGTGGACAGTA-----ACAAGGCAAACTCTTCT-GTGTCGCTCTT-------------CACAAACAGGAAGGCCACAGCCAAGCGAACTGAGGG-AAGCGCCTGTGCTCATGCCCATGCATGCTCACA-TTCTCTGCCT------- i mm10.chr15 C 0 C 0 s canFam3.chr10 40988124 358 - 69331447 AAAGACATCCCTACTCTCCTGGAGCAAAATAAGAGAAAAACACACAGGGAAAAGAGGTCCTTGACATGAAATAAGAACAGTTCAAATATGTCACCAAAA-TCCAAAAACAACCTCCAAAACACTCATAAGTGGACCCG-TTATAAAC---TCTGGAACCACAGGGAGAGTTAATAAATTCCTACTCTAAATGCTT---TTCCTTTTCAGATCATAATTTTAAAAACTGGGTAAACAGTTTGGTAGGAAATCAAATTCTTCT-GT--GTTTTCTTCACATACATCAAAACAACTCGCAAACCCCCAAGCAAGCTAA-----GCGAGCCTTCCTTATTCATGCTCCTATGCATCCACATTTCCCTACCTTTaaaaa i canFam3.chr10 C 0 C 0 a score=1825344.000000 s hg38.chr22_KI270876v1_alt 220559 560 + 263666 aaaacaaaaaaaaaaaaa--gaaagaaaga--------aaaaaGGGGGAACAAAGTGGTAGGAGAAGAAAAAAATTTATTTCCAATTATCAAAGTCAAATAAGGAAAGCTATGCTTTATAGCTATATACAATTCACATTAAGAGACAAAAAGGTGTAAAAACTCCACACTATAAA--------------------GAGACTCTAAAAAGAATCACAGTCTTAT-------ACACAGAGATTAAGATGCACACATACTTCAT-TCTATCAGGAGAGCATGTTATCAGACTTTGTGACTG------ATAGCTTATCACCCTATCTGTTAGTTCAGAGGAGAGAATGTGTCCATTTGAGCACTAAAGAAAG---TCTTCTGAGGAGGGCCCACAGAAGAAGTTTCTGGCATGCTTGCTTCTGAGAAAGAAAAATCAGATAATCTGGGACAGCAATATGGGTATTGCCAATAATTCTAAC-----CT-----TGCTTCCTGAATTC--CTACATCTCAAAAATGCTGGATTTTGCAATGT---GAGTCTGGT-GG--------GCAGAAAGGGTCTGGAGCCACATTTTAGATGCTCTGCCTCTGACTCCAATAATTCAAGAGGCTACTTGt-----------ttt s panTro4.chr22 34600269 559 + 49737984 aaaaaaaaaaaaaaaaaa--gaaagaaaga-----aagaaaaaaGGGGAACAAAGTGGTAGGAGAAGAAAAAAATTTATTTCCAATTATCAAAGTCAAATAAGGAAAGCTATGCTTTATAGCTATATACAATTCACATTAAGAGACAAAAAGGTGTAAAAACTCCACACTATAAA--------------------GAGACTCTAAAAAGAATCACAGTCTTAT-------ACACAGAGATTAAGATGCACACATACTTCAT-TCTATCAGGAGAGCATGTTATCAGACTTTGTGACTG------ATAGCTTATCACC----CTGTTAGTTCAGAGGAGAGAATGTGTCCATTTGAGCACTAAAGAAAG---TCTTCTGAGGAGGGCCCACAGAAGAAGTTTCCGGCATGCTTGCTTCTGAGAAAGAAAAATCAGATAATCTGGGACAGCAATATGGGTATTGCCAATAATTCTAAC-----CT-----TGCTTCCTGAATTC--CTACATCTCAAAAATGCTGGATTTTGCAATGT---GAGTCTGGT-GG--------GCAGAAAGGGTTTGGAGCCACATTTTAGATTCTCTGCCTCTGACTCCAACAATTCAAGAGGCTACTTGt-----------ttt i panTro4.chr22 I 1 C 0 s ponAbe2.chr22 31020066 559 + 46535552 AAAACAAACCAAAAAAAA---CAAGGAAGA--------AAAAAAGGGGAACAAAGTGGTAGGAGAAGAAAAAAATTTATTTCCAATTATCAAAGTCAAATAAGGAAAGCTATGCTTTATAGCTATATACAATTCACATTAAGAGACAAAAAGCTGTAAAAACTCCACACTATAAA--------------------GAGACTCTAAAAAGAATCACAGTCTTAT-------ACACAGAGATTAAGATGCATACATACTTCAT-TCTATCAGGAGAGCATGTTATCAGACTTTGTGACTG------ATAGCTTATCACCCTGTCTATTAGTTCAGAGGAGAGAATGTGTCAATTTGAGCATTGAAGAAAG---TCTTCTGAGGAGGGCCCACAGAGGAAGTTTCTGGCATGCCTGCTTCTGAGAAAGAAAAATCAGATAATCTGGGACAGCAATATGGGTATTGCCAATAATTCTAAC-----CT-----TGCCTCCTGAATTC--CTACATCTCAAAAATGCTGGATTTTGCAATGT---GAGTCTGGT-GG--------GCAGAAAGGGTTTGGAGCCACATTTTAGATTCTCTGCCTCTGACTCCAATAATTCAAGAGGCTACTTGt-----------ttt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100573890 570 - 115148730 aaaacaaaaaaaaaaaaa--agaaaaaaaacaagaaagaaaaaaGGGGAATAAAGTGGTAAGAGAAGAAAAAAATTTATTTCCAATTATCAAAGTCAAATAAGGAAAGCTATGCTTTATAGCTATATACAATTCACATTAAGAGACAAAAAGGTGTAAAAACTCCACACTATAAA--------------------GAGACTGTAAAAAGAATCACAGTCTTAT-------ACACAGAGATTAAAATGCATACATACTTCAT-TCTATCAGGAGAGCATGTTATCACACTTTGTGACTG------ATAGCTTATCACCCTATCCGTTAGTTTACAGGAGAGAATGTGTCAATTTGAGCACTGAAGAAAG---TCTTCT---GAGGGCCCACAGAGGAAGTTTCTGGCGTGCTTGCTTCTGAGAAAGAAAAATCAGATAATCTGGGACAGCAATATGGGTATTGCCAATAATTCTAAC-----CT-----TGCTTCCTGAATTC--CTGCATCTCAAAAATGCTGGATTTTGCAATGT---GAGTCTGGTGGG--------GCAGAAAGGGTTTGGAGCCACATTTTAGATTCTCTGCCTCTGACTCCAATAATTCAAGAGGCTACTTGtt-------ttgttt i nomLeu3.chr7b I 285 C 0 s rheMac3.chr10 80717937 545 + 95678458 ----gaaaaaaaaaaaaa--ccaagaaaga--------aaaaaaGGGGAACAAAGTGGCAGGAGAAGAAACAAATTTCTTTCCAATTATCAAAGTCAAATAAGGAAAGCTATGCTTTGTAACTATGTACAATTCACATTAAGAGACAAAAAGGTGTAAAAACTCTACACTATAAA--------------------GAGACTCTAAAAAGAATC-----------------ATCCAGAGATTAAGATGCCTACACACTTCAT-TCTATCAGGAGAACATGTTATCAGACTTTGTGACTG------ATAGCTTATCACACTGTCTGTGAGTTCAGAGGAGAGAATGTGTCCATTTGAGCACTGAAGAAAG---TCTTCTGAGGAGGGCCCAC-GAGGAAGTTTCTGACATGCTTGCTTCTGAGAAAGAAAAATCAGATAATCTGGGACAGCAATATGAGTATTGCCAATAATTCCAAC-----CT-----TGCACCCTGAATTC--CTACATCTCAAAAATGCTGGATTTTGTAATGT---GAGTCTTGT-GG--------GCAGAAAGGGTTTGGAGCCACATTTTAGATTCTCTGCCTCTGACTCCAACAATTCAAGAGGCTACTTGt-----------ttt i rheMac3.chr10 I 4 C 0 s macFas5.chr10 81144499 547 - 96509753 --aaaaaaaaaaaaaaaa--ccaagaaaga--------aaaaaaGGGGAACAAAGTGGCAGGAGAAGAAAAAAATTTCTTTCCAATTATCAAAGTCAAATAAGGAAAGCTATGCTTTGTAACTATGTACAATTCACATTAAGAGACAAAAAGGTGTAAAAACTCTACACTATAAA--------------------GAGACTCTAAAAAGAATC-----------------GTCCAGAGATTAAGATGCCTACACACTTCAT-TCTATCAGGAGAGCATGTTATCAGACTTTGTGACTG------ATAGCTTATCACACTGTCTGTGAGTTCAGAGGAGAGAATGTGTCCATTTGAGCACTGAAGAAAG---TCTTCTGAGGAGGGCCCAC-GAGGAAGTTTCTGACATGCTTGCTTCTGAGAAAGAAAAATCAGATAATCTGGGACAGCAATATGAGTATTGCCAATAATTCCAAC-----CT-----TGCACCCTGAATTC--CTACATCTCAAAAATGCTGGATTTTGTAATGT---GAGTCTTGT-GG--------GCAGAAAGGGTTTGGAGCCACATTTTAGATTCTCTGCCTCTGACTCCAACAATTCAAGAGGCTACTTGt-----------ttt i macFas5.chr10 I 5 C 0 s papAnu2.chr10 76400603 549 + 90941950 aaaaaaaaaaaaaaaaaa--ccaagaaaga--------aaaaaaggggaacaaagtggcaggagaagaaaaaaatttctttccaatTATCAAAGTCAAATAAGGAAAGCTATGCTTTGTAACTATGTACAATTcacattaagagacaaaaagGTGTAAAAACTCTACACTATAAA--------------------GAGACTCTAAAAAGAATC-----------------ATCCAGAGATTAAGATGCCTACACACTTCAT-TCTATCAGGGGAGCATGTTATCAGACTTTGTGACTG------ATAGCTTATCACCCTGTCTGTGAGTTCAGAAGAGAGAATGTGTCCATTTGAGCACTGAAGAAAG---TCTTCCGAGGAGGGCCCAC-GAGGAAGTTTCTGACATGCTtgcttctgagaaagaaaaatcagataaTCTGGGACAGCAATATGAGTATTGCCAATAATTCCAAC-----CT-----TGCATCCTGAATTC--CTACATCTCAAAAATGCTGGATTTTATAATGT---GAGTCTTGT-GG--------GCAGAAAGGGTTTGGAGCCACATTTTAGATTCTCTGCCTCTGACTCCAACAATTCAAGAGGctacttgt-----------ttt i papAnu2.chr10 I 5 C 0 s chlSab2.chr19 18669565 552 + 33263144 gaaaaaaaaaaaaaaaaaccccaagaaaga--------aaaaaaGGGGAACAAAGTGGCAGGAGAAGAAAAAAATTTCTTTCCAATTATCAAAGTCAAATAAGGAAAGCTATGCTTTGTAACTATGTACAATTCACATTAAGAGACAAAAAGGTGTAAAAACTCCACACTATAAG--------------------GAGACTCTAAAAAGAATC-----------------ATCCAGAGATTAAGATGCATACACACTTCAT-TCTATCAGGAGAGCATGTTATCAGACTTTGTGACTG------ATAGCTTATCACCCTGTCTGTGAGTTCAGAGGAGAGAATGTGTCCATTTGAGCACTGAAGAAAG---TCTTCTGAGGAGGGCCCACAGAGGAAGTTTCTGGCATGCTTGCTTCTGAGAAAGAAAAATCAGATAATCTGGGACAGCAATATGGGTATTGCCAATAATTCCAAC-----CT-----TGCACCCTGAATTC--CTACATCTCAAAAATGCTGGATTTTGTAATGT---GAGTCTTGT-GG--------GCAGAAAGGGTTTGGAGCCACATTTTAGATTCTCTGCCTCTGACTCCAACAATTCAAGAGGCTACTTGt-----------ttt i chlSab2.chr19 I 5 C 0 s calJac3.chr1 198376036 577 + 210400635 aaaaaaaaagaaagaaag--aaaagaagaa--------aagaaaGGGAAACAAAGTGGTAGGAGAA-AAAAAGATTTCTTTCCAATTATCGAAGTCAAATAAGGAAAGTTACGCTTTATAGCTATGTACAATCCACATTAAGAGACAAGAAGGTGTAAAAACTCCACACTATAAA--------------------GAGACTCTAAAAAGAATCGCAATCTTAT-------ACACAGAAATTAAGATGAATACATATTTCAT-TCTATCAGGAGAGTATGTTATCAGACTATGTGACTGTACTCTGAAGCTTATCAGCCTATCTATTAATTCAGAGGAGAAAATTCATCAATTTGAGCATTAAAGAAAC---CCTTCTAAGGAGGGCCCACAGAGGAAGTTTCTGGCATGCTTGCTTCTGAG--AGAAAAATCAGATAATCTGGGACAGCAATATAGGTATTGTCAATAATTCTAGC-----CT-----TGCATCCTGAATTC--CTACTTCTCAAAAATGCTGGATTTTGCAATGTGAAGAGTATGGT-GG--------GCAGAAAGTATGCGGAGCCACATTTTAGATTCTCTGCCTCTGACTCCAATAATTCAAGAGGCTACTTGtttttgttgttgttt i calJac3.chr1 I 4 C 0 s mm10.chr15 77206098 443 + 104043685 ----------------------------GA--------AAACAAAAGAAACAAAGAGCAGGGCAAAG---------TCTTCCCAATCACCAGAGTCAAATAAGGAAGCCTGTG-GTTACAGCCACGGAAGACTCTCGTTAAG---------GACTTGGGGACACAGCACAGTAAAACTGCTTGGGTAACATGTGTGGGACCCTAGGTACCACC-----------------ACACAAGGA-CATAATGATTCCACACTATGTGGCTACCTAAAAATC---CACACAGACTGTGTGTCTGTACTCCAAATGTTATCAGTCTCTTTATTGATCCAG-----------------------------GGAAGG---TCT-----------------CAAGAAATCTCTCGCAGGCTTGACTCTGGGAAAGAAAGGT------ATCCAAAATGGC-TTGTGGATGTCGTCTACGACACTACCATGGGCC-----TGTATCGTGACTGCTGCTTCCTTCCAACAGTACCAGG--------------AAGTCTGAT-GG------------------------GTCACATTTTGGATTTTCAAAATTTG------------TAAGAAACTACTAGT-----------TTT i mm10.chr15 C 0 I 335 s canFam3.chr10 40988482 560 - 69331447 --------aaaaaaaaaa--aaaaaaaagg--------aagaaaaggaaacaaaGAGGTTGAAGGAAAAA------TCTCTCAAATAGTCAAAGTCAAACGAGGAAACTTATGCTTGATAGCTACGTGGGATTCAGATTAAGAGACACAAAATTGTAACAATTCCACACTATGAA--------------------GACACTCTGAAAAGGATCACAGTCTTATCTATCACCTACAG-GATTAGGATGCACACATACTTCAT-TCTCTCAGGAGAACATTTTATCAGAATCCACCACTGTACTCTGAAGCTTATCGGCCTGTCTATTAGTTCAGAGGAGAGGACATGTGGACTGGAACGTCCGAGAAAGAAATGTCCTAGGGAGGG-CTGCAGAGGAAG--TCTGGCATGCTTGCT----AGAAAGAAAAATCCGATTACCAGAGACAGCAATATAGGTGCTGCCAGTAATTCTAAG-----GCTATGATGTAGACAGAATTC--TTGCTTCT-GAAAGTGCTGGATTTTGTAATGTGAAAAGTCTGGG-GGCCAGACTCTCAGAAAGGGTTTGGAGCCACATTTGGCATTCTCTGCCACAAAGTCTAACAATTCAAGAGACT-------------------- i canFam3.chr10 C 0 C 0 a score=138612.000000 s hg38.chr22_KI270876v1_alt 221119 48 + 263666 gtttgtttttgagatggagtctcactctgtggcccaggttggagtgca s panTro4.chr22 34600828 48 + 49737984 gtttgtttttgagatggagtctcactctgtggcccaggttggagtgca i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31020625 48 + 46535552 gtttgtttttgagacagagtctcactccgtggcccaggctggagagca i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100574460 48 - 115148730 gtttgtttttgagatggagtctcactccgtggcccaggctggagtgca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80718482 48 + 95678458 gtttgtttttgagatggagtctcactctgtgacccaggttggagtgcc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81145046 48 - 96509753 gtttgtttttgagatggagtctcactctgtgacccaggttggagtgca i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76401152 48 + 90941950 gtttgtttttgagatggagtctcactctgtgacccaggttggagtgca i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18670117 48 + 33263144 gtttgtttttgagatggagtctcactctgtgacccaggttggagtgca i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198376613 48 + 210400635 gtttgtttttgagatggagtgttgctctgtggcccagcctggagtgca i calJac3.chr1 C 0 C 0 s canFam3.chr10 40989042 5 - 69331447 -------------------------------------------GTACA i canFam3.chr10 C 0 C 0 e mm10.chr15 77206541 335 + 104043685 I a score=499545.000000 s hg38.chr22_KI270876v1_alt 221167 170 + 263666 gtggcatgatctcggctcactgcaacctccgcctcccgggttcaagtgattctcctgtctcaacctcccaagtggctgggattacaggcgcctgccaccacacccagcta-tttttgta-tttttagtagagacaaggtttcaccatg-ttggccaggctggCAGGCTAC-TTG s panTro4.chr22 34600876 170 + 49737984 gtggcatgatctcggctcactgcaacctccgcctcccgggttcaagtgattctcctgtctcaacctcccaagtcgctgggattacaggcgcctgccaccacacccagcta-tttttgta-tttttagtagagacaaggtttcaccatg-ttggccaggctggCAGGCTAC-TTG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31020673 170 + 46535552 gtggcatgatctcggctcactgtaacctccgcctcccaggttcaagtgattctcctgtctcaacctcccaagtagctgggattacaggtgcctgccaccatacccagcta-tttttgta-tttttagtagacacaaggtttcaccatg-ttggccaggctggGAGGCTAC-TTG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100574508 170 - 115148730 gtggcatgatctcggctcactgcaacctccgcctcccaggttcaagtgattctcctgtctcaacctcccaagtagctgggattacaggcgcctgccaccacacccagcta-tttttgta-tttttagtagagacaaggtttcaccatg-ttggccaggctggGAGGCTGC-TTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80718530 170 + 95678458 gtggcatgatctcagctcactgcaacctctgcctcccgggttcaagtgattctcctgtctcagtctcccaagtagctgggattacaggcgcccgccaccacacccagcta-tttttgta-tttttagtagagaccgggtttcaccatg-ttggccaggctggGAGGCTAC-TTG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81145094 169 - 96509753 gtggcatgatctcagctc-ctctgagatctgcctcccgggttcaagtgattctcctgtctcagtctcccaagtagctgggattacaggcgcccaccaccacacccagcta-tttttgta-tgtttagtagagaccgggtttcaccatg-ttggccaggctggGAGGCTAC-TTG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76401200 171 + 90941950 gtggcatgatctcagctcactgcaacctcggcctcccgggttcaagtgattctcctgtctcagtctcccaagtagctgggattacaggcgcctgccaccacacccagcta-tttttgta-tttttagtagagaccgggtttcaccatg-ttggccaggctgggaggCTACtttt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18670165 170 + 33263144 gtggcatgatctcagctcactgcaacctctgcctcctgggttcaagtgattctcctgtctcagtctcccaagtagctgggattacaggcgcccgccaccacacccagcta-tttttgta-tttttagtagagagggggtttcaccatg-ttggccaggctggGAGGCTAC-TTG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198376661 173 + 210400635 gtggcatgatctctgctcactgcaacctctaactcccaggttcaagtgattctcctgcctcagcctcccaagtagctgggattacacgtgcgtatcaccataccaggctattttttgtgttttttagtagagaaggggtttcatcatgtttggccaggatggGAGGCTAC-TTG i calJac3.chr1 C 0 C 0 e mm10.chr15 77206541 335 + 104043685 I e canFam3.chr10 40989047 0 - 69331447 C a score=697400.000000 s hg38.chr22_KI270876v1_alt 221337 197 + 263666 TTTTATACGAGTTTCTCTGTGGTTGTAAGA---GGATAGCGGGGGGAAGTAGGTATACCGGGGGAGCCAGCACAATTTCTCAAAAATGTACCTGAGAAATCAGGCACTAAAAATTCTTCAGAAGAAATCTGAGGCAACCCTCTATACATAGTTTATATTCCTATCACTTCCTGGACTGGTAGAGACAATACAGACTCACC s panTro4.chr22 34601046 197 + 49737984 TTTTATACGAGTTTCTCTGTGGTTGTAAGA---GGATAGCGGGGGGAAGTAGGTATACCGGGGGAGCCAGCATAATTTCTCAAAAATGTACCTGAGAAATCAGGCACTAAAAATTCTTCAGAAGAAATCTGAGGCAACCCTCTATACATAGTTTATATTCCTATCACTTCCTGGACTGGTAGAGACAATACAAACTCACC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31020843 197 + 46535552 TTTTATACGAGTTTCTCTGTGGTTGTAAGA---GGATAGTGGGGGGAAGTAGGTATACCGGGGGAGCCAGCATAATTTCTCAAAAATGTACCTGAGAAATCAGGCACTAAAAATTTTTCAGAAGAAATCTGAGGCAACCCTCTATACATAGTTTATATTCCTATCACTTCCTGGACTGGTAGAGACAATACAGACTCACC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100574678 196 - 115148730 TTTTATATGAGTTTCTCTGTGGTTGTAAGA---GGATAGTGGGAGGAAGTAGGTATACCGGGCGAGCCAGCATAATTTCTCAAAAATGTACCTGAGAAAT-AGGTACCAAAAATTTTTCAGAAGAAATCTGAGGCAACCCTCTATACATAGTTTATATTCCTATCACTTCCTGGACTGGTAGAGACAATACAGACTCACC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80718700 197 + 95678458 TTTTACACGAGTTTCTCTGTGGTTATAAGA---GGATAGTGGGGGGAAGTAGGTATACCGGGGGAGCTAGCACAATTTCTCAAAAATGTACCTGAAAAATCAAGCACTAAAAATTTTTCATAAGAAATCTGAGGCAACCCTCTATACATAGTTTATATTCCTATCACTTCCTGGACTGGTAGAGACAATACAGACTCACC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81145263 197 - 96509753 TTTTACACGAGTTTCTCTGTGGTTATAAGA---GGATAGTGGGGGGAAGTAGGTATACCGGGGGAGCTAGCACAATTTCTCAAAAATGTACCTGAAAAATCAAGCACTAAAAATTTTTCATAAGAAATCTGAGGCAACCCTCTATACATAGTTTATATTCCTATCACTTCCTGGACTGGTAGAGACAATACAGACTCACC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76401371 197 + 90941950 ttttACACGAGGTTCTCTGTGGTTATAAGA---GGATAGTGGGGGGAAGTAGGTATACCGGGGGAGCTAGCACAATTTCTCAAAAATGTACCTGAAAAATCAAGCACTAAAAATTTTTCATAAGAAATCTGAGGCAACCCTCTAAACATAGTTTATATTCCTATCACTTCCTGGACTGGTAGAGACAATACAGACTCACC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18670335 193 + 33263144 TTTTACACGAGTTTCTC----GTTATAAGA---GGACAGTGGGGGGAAGTAGGTATACTGGCGGAGCTAGCACAATTTCTCAAAAATGTACCTGAGAAATCAGGCACGAAAAATTTTTCATAAGAAATCTGAGGCAACCCTCTATATATAGTTTATATTCCTATCACTTCCTGGACTGGTAGAGACAATACAGACTCACC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198376834 197 + 210400635 TTTTATATGAGTTTCTCTCTGGTTATAAGA---AGATAGTGGGGAGAAGTAGGTATACCTGGGGAGCCAGCACTATTTTTCAAAAATGTACCTGAGAAATCAGGCACTGAAAATTTTTCAAATGACATCTGAGGCAACCCTCTATACATAATTTATATTCCTATCACTTTCTGGACTGGTAGAGACAACGCAGACTCACC i calJac3.chr1 C 0 C 0 s canFam3.chr10 40989047 200 - 69331447 TTTCATGCAAGCTTCTCCATGAGTGTAAAGGCTGGTTGGGGGGGAGAAGTGTGCACATCTGGGGAGCCAAGACAATTTTATAAAAATATACCTGAGGAATCAGGCACTAAAATTTTTCCAAAAGAAATCCAAGGCAACACTCTCTACATAATTTATACTCCTTCCACTTTCAGGACAGCTGGAGACAATAAAGACTCACC i canFam3.chr10 C 0 C 0 e mm10.chr15 77206541 335 + 104043685 I a score=845327.000000 s hg38.chr22_KI270876v1_alt 221534 229 + 263666 AAAACAACACTGAGGTAGAGAAATGAGATGTATGAGTATTGTCTA--TGAAGCTGACTT---------AAAAAAAAAAAAAAAAGTCGAAAGAATGAGGCTCTTTTTCCCTCACTTCCTCTCAGCTTAAAATAGCAGGGATTCCCACAGGGCAA-TCTCTAACAGAATTC---tgctactcaa-atgtgacacatggaccagcaacagcagaatgagcatcaactggaaactccttagatttga--------a s panTro4.chr22 34601243 231 + 49737984 AAAACAACACTGAGGTACAGAAATGAGATGTATGAGTATTGTCTA--TGAAGCTGACTT-------AAAAAAAAAAAAAAAAAAGTCGAAAGAATGAGGCTCTTTTTCCCTCACTTCCTCTCAGCTTAAAATAGCAGGGATTCCCACAGGGCAA-TCTCTAACAGAATTC---tgctactcaa-atgtgacacacagaccagcaacagcagaatgagcatcaattggaaactccttagatttga--------a i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31021040 236 + 46535552 AAAACAACACTGAGGTAGAGAAATGAGATGTATGAGTATTGTCTA--TGAAGCTGACTT----------AAAAAAAAAAAAAAAGTTGAAAGAATGAGGTTCTTTTTCCCTCACTTCCTCTCAGCTTAAAATAGCAGGGATTCCCACAGGGCAA-TCTCTAATAGAATTC---tgctactcat-atgtgacacatggaccagcatcagcagaatgagcatcaactggaaactccctggatttgaagaatctca i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100574874 227 - 115148730 AAAACAACACTGAGGTAGAGAAATGAGATGTATGAGTATTGTCTA--CGAAGCTGACTT-----------AAAAAAAAAAAAAAGTTGAAAGAATGAGGCTCTTTTTCCCTCACTTCCTCTCAGCTTAAAATAGCAGGGATTCCCACAGGGCAA-TCTCTAATAGAATTC---tgctactcaa-atgtgacacatggaccagcatcagcagaatgagcatcaactggaaactccttagatttga--------a i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80718897 231 + 95678458 AAAACAACACCGAGCTAGAGAAATGAGATGTATGAGTATTGTCTA--TGAATCTGACT-------AAAAAAAAAAAAAAAAAAAGCTGAAAGAATGAGGCTCTTTTTCCCTCACTTCCTCTCAGCTTAAAATAGCAGGGATTCCCACAGAGCAA-TCTCTAATAGAATTC---tgctactcaa-atgtgacacatggaccagcatcagcagaatgagcatcaactggaaactccttagatttga--------a i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81145460 233 - 96509753 AAAACAACACCGAGCTAAAGAAATGAGATGTATGAGTATTGTCTA--TGAATCTGACT-----aaaaaaaaaaaaaaaaaaaaaGCTGAAAGAATGAGGCTCTTTTTCCCTCACTTCCTCTCAGCTTAAAATAGCAGGGATTCCCACAGGGCAA-TCTCTAATAGAATTC---tgctactcaa-atgtgacacatggaccagcatcagcagaatgagcatcaactggaaactccttagatttga--------a i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76401568 238 + 90941950 AAAACAACACCGAGCTAGAGAAATGAGATGTATGAGTATTGTCTA--TGaatctgacttaaaaaaaaaaaaaaaaaaaaaaaaagttgaaagaatgagGCTCTTTTTCCCTCACTTCCTCTCAGCTTAAAATAGCAGGGATTCCCACAGGGCAA-TCTCTAATAGAATTC---TGCTACTCAA-ATGTGACACATGGACCAGCATCAGCAGAATGAGCATCAACTGGAAACTCCTTAGATTTga--------a i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18670528 238 + 33263144 AAAACAACACCGAGCTAGAGAAATGAGATATATGAGTATTGTCTA--TGAATCTGACTTaaaaaaaaaaaaaaaaaaaaaaaaaGTTGAAAGAATGAGGCTCTTTTTCCCTCACTTCCTCTCAGCTTAAAATAGCAGGGATTCCCACAGGGCAA-TCTCTAATAGAATTC---tgctactcaa-atgtgacacatggaccagcatcagcagaatgagcatcaactggaaactccttagatttga--------a i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198377031 224 + 210400635 ATAGCAACACTAAGCTAGAGAAATGAGATGTATGAGTATTGTCTA--TGAATCTGACTT--------------AAAAACAAAAAATTGAAAGAATGAGGCTCTTTTTCTCTCACTTCCTCTCAGCTTAAAATAGCAGGGATTCCCACAGGGCAA-TCTCTAATAGAATTC---tgctactcaa-atgtgacatgtggaccagcatcagcagaatgagcatcaactggaagctccttagatttga--------a i calJac3.chr1 C 0 C 0 s mm10.chr15 77206876 188 + 104043685 GAAAAAAAAGTAAGCTAGAGATACTGGATTGAAG------GTCCAGCTGAATTTGACTT---------------TTAATAAAAGCTCAAAGTAATGAGTCTCTTCTTACCTTATTTCCTCTCAGCTTAAAATAGCAG-------------------TTCTGACAGAATACCCATGCTACCCAC-------------GACCAACACCCACATCAT---CATCAA-GGAAAGCTTTTTAGATAAGA--------A i mm10.chr15 I 335 I 17 s canFam3.chr10 40989247 229 - 69331447 ---ACAACACTGAGCTATAGAAATGGGCCACATGAA----GTCCAACTGAATCTGACtt------aaaaaaaaaaaaaaaaaaaGTTGAAAGAATAGGGCTTTTCTAACTTTGCCTCCTCTCAGCTTAAAATAGCAAGGATTCCCACAGGGCAATTCTCTAATAGAATTt---tgtcactcaaaatatgacccatggcctagcaccagaagccttagcatcagctaggagctacttaaatatga--------a i canFam3.chr10 C 0 C 0 a score=1560727.000000 s hg38.chr22_KI270876v1_alt 221763 471 + 263666 gaatctcaggccccaccctagacttacaaaatcaaaatcat-atgataacaaaagccccaggt---aactctcaggcacaccgaaatctgagaagcTGGTCTAGACAGAGGCACTGGCCACATGCAGCAGTAGCGACTCATGGGAGAAGG---CGTAGATATGGCTGCCACTTTCCAGTTAGGGGATGTAAACCACCCTGGAAGACAAAAC--------AGTGAACATTCCTCTCCCACTTGCTGGTTTCAATGTAACACCACCAACCgctactatttactcagagcatattatgtgccacaactttgcatg--cattatctcattgcatcttcacaatatctctgtaagacaggccctg--ttatctttttcacagatcaaaggaaattgaggcccaaagtggttacataatatactcatggtctcacagctagtgaataaagag-ccaaaagttcaacgttcgtttttaagactccaagatcatttcca s panTro4.chr22 34601474 471 + 49737984 gaatctcaggccccaccctagacttacaaaatcaaaatcat-atgataacaaaagccccaggt---aactctcaggcacaccgaaatctgagaagcTGGTCTAGACAGAGGCACTGGCCACATGCAGCAGTAGCGACTCATGGGAGAAGG---GGTAGATATGGCTGCCACTTTCCAGTTAGGGGATGTAAACCACCCTGGAAGACAAAAC--------AGTGAACATTCCTCTCCCACTTGCTGATTTCAATGTAACACCACCAACCgctactatttactcagagcatattatgtgccacaactttgcatg--cattatctcattgcatcttcacaatatctctgtaagacaggcccta--ttatctttttcacagatcaaaggaaattgaggcccaaagtggttacataatatactcatggtctcacagctagtgaaaaaagag-ccaaaagttcaacgttcgtttttaagactccaagatcatttcca i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31021276 473 + 46535552 gaatctcaggccccaccctagacttacaaaatcaaaatcaa-atgataacaaaagccccaggtaacaactctcaggcacactgaaatctgagaagcTGGTCTAGACAGAGGCACTGGCCACATGCAGCAGTAGCGACTCATGGGAGAAGG---GGTAGATATGGTTGCCACTTTCTAGCTAGGGGATGTAAACCACCCTGGAAGACAAAAC--------AGTGAACATTCCTCTCCCACTTGCTGATTTCAATGTAACACCACCAACCgctactatttactcagagcatattatgtgccacaactttgcatg--cattatctcattgcatcttcacagtatctctgtaagacaggcccta--ttatctttttcacagatcaaaggaaattgaggcccaaagtggttacataatacactcatggtctcacagctagtgaataaagag-ccaaaagttcaacgttcg-ttttaagactccaagatcatttcca i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100575101 471 - 115148730 gaatctcaggccccaccctagacttacaaaatcaaaatcaa-atgataacagaagccgcaggt---aactctcaggcacactgaaatctgagaagcTGGTCTAGACAGAGGCACTGGCCACATGCAGCAGTAGCGACTCACGGGAGAAGG---GGTAGATATGGTTGCCACTTTCTAGTTAGGGGATGTAAACCACCCTGGAAGACAAAAC--------AGTGAACATTCCTCTCCCACTTGCTGATTTCAATGTAACATCACCAACCgctactatttactccaagcatattatatgccacaactttgcatg--cattatctcattgcatcttcacaatatctctgtaagacaggcccta--ttatctttttcacagatcaaaggaaactgaggcccaaagtggttacataatatactcatggtctcacagctagtgaatgaagag-ccaaaagttcaacgttcgtttttaagactccaagatcatttcca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80719128 466 + 95678458 gaatctcaggccccaccctagacttacaaaatcaaaatcaa-atgataacaaaagccccaggt---aattctcaggcacactgaaatctgagaagcTGGTCTAGACAGAGGCACTGGCCACATGCAGCAGTAGAGACTCATGGGAGAAGG---GGTAGATATGGCTGCCACTTTCCAGTTAGAGGATGTAAGCCACCGTGGAAGACAAAAC--------AGTGAACATTCCT-----ACTTGCTGATTTCAATAAAACACCACCAGCagctactatttactcagagcatattatgtgccacaactttgcatg--cattatctcattgcatcttcacaatacctctgtaagataggcccta--ttatctttttcacagatcaaaggaaattgaggttcaaagtggtaacataatacactcatggtctcacagctagtgaataaagag-ccaaaagttcaacgttggtttttaagactccaagatcgtttcca i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81145693 466 - 96509753 gaatctcaggccccaccctagacttacaaaatcaaaatcaa-atgataacaaaagccccaagt---aattctcaggcacactgaaatctgagaagcTGGTCTAGACAGAGGCACTGGCCACATGCAGCAGTAGAGACTCATGGGAGAAGG---GGTAGATATGGCTGCCACTTTCCAGTTAGAGGATGTAAGCCACCGTGGAAGACAAAAC--------AGTGAACATTCCT-----ACTTGCTGATTTCAATATAACACCACCAGCagctactatttactcagagcatattatgtgccacaactttgcatg--cattatctcattgcatcttcacaatacctctgtaagataggcccta--ttatctttttcacagatcaaaggaaattgaggttcaaagtggtaacataatacactcatggtctcacagctagtgaataaagag-ccaaaagttcaacgttggtttttaagactccaagatcgtttcca i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76401806 466 + 90941950 gaatctcaggccccaccctagacttacaaaatcaaaatcaa-atgatAACAAAAGCCCCAGGT---AATTCTCAGGCACACTGAAATCTGAGAAGCTGGTCTAGACAGAGGCACTGGCCACATGCAGCAGTAGAGACTCATGGGAGAAGG---GGTAAATATGGCTGCCACTTTCCAGTTAGAGGATGTAAACCACCGTGGAAGACAAAAC--------AGTGAACATTCCT-----ACTTGCTGATTTCAATATAACACCACCAGCAGCTACTATTTACTCAGAGCATATTATGTGCCACAACtttgcatg--cattatctcattgcATCTTCACAATACCTCTGTAAGATAGGCCCTA--TTATCTTTTTCACGGAtcaaaggaaattgaggctcaaagtGGTAACATAATACACTCATGGTCTCACAGCTAGTGAATAAAGAG-CCAAAAGTTCAACGTTGGTTTTTAAGACTCCAAGATCGTTTCCA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18670766 466 + 33263144 gaatctcaggccccaccctagacttacaaaatcacaatcaa-atgataacaaaagccccaggt---aattctcaggcacactgaaatctgagaagcTGGTCTAGACAGAGGCACTGGCCACATGCAGCAGTAGAGACTCATGGGAGAAGG---TGTAGATACGGCTGCCACTTTCCAGTTAGAGGATGTAAACCACCGTGGAAGACAAAAC--------AGTGAACATTCCT-----ACTTGCTGATTTCAATATAACACCACCAGCagctactattcactcagagcatattatgtgccacaactttgcatg--cattatctcattgcatcttcacaatatctctgtaagataggcccta--ttatctttttcacagatcaaaggaaattgaggctcaaagtggtaacataatacactcatggtctcacagctagtgaataaagag-ccaaaagttcaacgttggtttttaagactccaaggtcgtttcca i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198377255 456 + 210400635 gaatctcaggccccagcctagatatacaaactcaaaatcaa-attatagcaaaagccccaggt---aattctcaggcacactgaaatctgaaaagcTGGTCTAGAGGGAAGCAGTGGCCACATGCAGCAGCAGTGACTCATGGGAAAAGG----GTAGTTATGGTTGCCACTTTCCAGTTAGGGAATGTAAACTACTGTGGAAGACAAAAG--------AGGGAACATTCCTCTCCTACTTGCTGATTTCAGTGTAAAACCACCACCaactactatttactcagagcatattatgtaccacaactatgcata--cattatcacactgcatcttcacaatatctctgtaagataggcccta--ttatctttttcac--------------ttaggcccaaagtggttacagaacacactcatggtctcacagctagtgaataaagggacaaaaagttcaacactagtttttaagactccaagatc-tttcca i calJac3.chr1 C 0 C 0 s canFam3.chr10 40989476 426 - 69331447 gactctcaggcctcaccctagacttacagaatcaaaattaacattataaccaaagccccaggt---ggtctgcacgcacattaaagtctgaagagTTGGTCCAGTTACA-GCACTGT---CACAAAGCAGCAGAGACTCAGGGAAGAATGGCAGAGAGATATAGCTGCTACTTTTCAG-GAGGGGAT-TAAACCCCTCTGGAAGACAAAACCGAGAGTGAGTGAATATTCCACCGCTGGTTGCTGATTTCATAAAGACACCACCAGTGGC-----------CAgaacacactatgtgccacaactgggcatgcccgttttctcattac--cttcaccgtatctttgtaagggaggccttactttatctttttcacatgtaaaaggaaattggggcccaa------------------------------------------aagag-ACAAAAGCTAAACACAAGTCTGTAGGACTCCAAGATGGTGACAA i canFam3.chr10 C 0 C 0 e mm10.chr15 77207064 17 + 104043685 I a score=379751.000000 s hg38.chr22_KI270876v1_alt 222234 117 + 263666 ctaaatcatacCTATTCACTGACAAAACTGAATCAAGACTGGAAAAAAAATCACTGAAAAACTTACCCTGGATATAAATAACCCTGCACTC-TACCTCTGCCCATTACCAAGACTTTA s panTro4.chr22 34601945 117 + 49737984 ctaaatcatacCTATTCACTGACAAAACTGAATCAAGACTGGAAAAAAAATCACTGAAAAACTTACCCTGGATATAAATAACCCTGCACTC-TACCTCTGCCCATTACCAAGACTTTA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31021749 112 + 46535552 ctaaaccatacCTATTCACTGACAAAACTGAATCAAGACTGG-AAAAAAATCACTGAAAAACTTACCTTGGAT----ATAACCCTGCACTC-TACCTCTGACCATTAACAAGACTTTA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100575572 112 - 115148730 ctaaaccatacCTATTCACTGACAAAACTGAATCAAGACTGG-AAAAAAATCACTAAAAAACTTACCTTGGAT----ATAACCCTGCACTC-TACCTCTGCCCATTACCAAGACTTTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80719594 111 + 95678458 ctaaaccatacCTATTCACTGACAAAACTGAATCAAGACTGG--AAGAAATCACTGAAAAACTTACCTTGGAT----ATAACCCTGCACTC-TACCTCTGCCCATTACCAAGACTTTA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81146159 111 - 96509753 ctaaaccatacCTATTCACTGACAAAACTGAATCAAGACTGG--AAGAAATCACTGAAAAACTTACCTTGGAT----ATAACCCTGCACTC-TACCTCTGCCCATTACCAAGACTTTA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76402272 111 + 90941950 CTAAACCATACCTATTCACTGACAAAACTGAATCAAGACTGG--AAGAAATCACTGAAAAACTTACCTTGGAT----ATAACCCTGCACTC-TACCTCTGCCCATTACCAAGACTTTA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18671232 111 + 33263144 ctaaaccatacCTATTCACTGACAAAACTGAATCAAGACTGG--AAGAAATCACTGAAAAACTTACCTTGGAT----ATAACCCTGCACTC-TACCTCTGCCCATTACCAAGACTTTA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198377711 99 + 210400635 ctaaaacatactTATTCACTGAGGAAATTGAA-CAAGACTGG-AAAAAAATCACTGAAAAACTTACCTTGGAT----ATAACCTTGCACTCTTATCTCTGCCA-------------TA i calJac3.chr1 C 0 C 0 s mm10.chr15 77207081 100 + 104043685 CTACAACACCCTTACTTGCTGA--AAACTGGA---AGACTGA----CAGCTCAGTG--GGATTTCCCTTGA------GTTACCCTGCATTC-TGCCTCCGCCCATTACGGAGACTGAA i mm10.chr15 I 17 C 0 s canFam3.chr10 40989902 109 - 69331447 CTGCATGACAATTGTTCACTGAT-AAATCGTATCCAGACTGA---CAAAATCAATGGAAATTCTACCCTGGAT----ATAACCTTGCAGGC-TACCCCTGCCCATTACCAAGGCTTCA i canFam3.chr10 C 0 C 0 a score=8294.000000 s hg38.chr22_KI270876v1_alt 222351 3 + 263666 AAT s panTro4.chr22 34602062 3 + 49737984 AAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31021861 3 + 46535552 AAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100575684 3 - 115148730 AAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80719705 3 + 95678458 AAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81146270 3 - 96509753 AAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76402383 3 + 90941950 AAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18671343 3 + 33263144 AAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198377810 3 + 210400635 AAT i calJac3.chr1 C 0 C 0 s mm10.chr15 77207181 3 + 104043685 GAC i mm10.chr15 C 0 C 0 e canFam3.chr10 40990011 0 - 69331447 C a score=429030.000000 s hg38.chr22_KI270876v1_alt 222354 145 + 263666 AACAAATGAAgccaggtgtggtgatgtgagcctgtaatcctagcttctcaggaggctgaggcaggagggtttgcttgagctcaggagtttgagaccagcctgggcaacatagtaaaactctcatctcaagaaaaaagt-aaaaaaC s panTro4.chr22 34602065 145 + 49737984 AACAAATGAAgccaggtgtggtgatgtgagcctgtaatcctagcttctcaggaggctgaggcaggagggtttgcttgagctcaggagtttgagaccagcctgggcaacatagtaaaactctcatctcaagaaaaaagt-aaaaaaC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31021864 145 + 46535552 AACAAATGAAgccaggtgtggtgatgtgagcctgtaatcctagcttctcaggaggctgaggcaggagggtttgcttgagctcaggagtttgagaccaacctgggcaacatagtaaaactctcatctcaagaaaaaagt-aaaaaaC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100575687 145 - 115148730 AACAAATGAAgccaggtgtggtgatgtcagcctgtaatcctagcttctcaggaggctgaggcgggagggtttgcttgagctcaggagtttgagaccagcctgggaaacatagtaaaactctcatctcaagaaaaaagt-aaaaaaC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80719708 144 + 95678458 AACAAATGAAgccaggtgtggtcgtgttagcctgtaatcctagcttctcaggaggctgaggtggga-ggtttgattgagcccaggagtttgagaccagcctgggcaacatagtaaaaccctcatctcaagaaaaaaGT-AAACAAC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81146273 144 - 96509753 AACAAATGAAgccaggtgtggtcgtgttagcctgtaatcctagcttctcaggaggctgaggtggga-ggtttgattgagcccaggagtttgagaccagcctgggcaacatagtaaaaccctcatctcaagaaaaaagt-aaacaaC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76402386 144 + 90941950 AACAaatgaagccaggtgtggtggtgttagcctgtaatcctagcttctcaggaggctgaggtggga-ggtttgattgagcccaggagtttgagaccagcctgggcaacatagtaaaactctcatctcaagaaaaaagt-aaaaaac i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18671346 144 + 33263144 AACAAATGAAgccaggtgtggtggtgtgagcctgtaatcctagcttctcaggaggctgaggtggga-ggtttgattgagcccaggagtttgagaccagcctgggcaacatagtaaaactctcatctcaagaaaaaagt-aaaaaaC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198377813 144 + 210400635 AACACATGAAgccagatgtggtgctgtg-gcctataaccctagtttctcaggaggctgagggggag-agtctgtttgagcccagaagtttgagaccagcctgggcaacatagtgagaatctcgtctcaagaaaaaaGTGGAAAAAC i calJac3.chr1 C 0 C 0 e mm10.chr15 77207184 0 + 104043685 C e canFam3.chr10 40990011 0 - 69331447 C a score=28377.000000 s hg38.chr22_KI270876v1_alt 222499 7 + 263666 AACAACA s panTro4.chr22 34602210 7 + 49737984 AACAACA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31022009 7 + 46535552 AACAACA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100575832 7 - 115148730 AACAACA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80719852 7 + 95678458 AACAACA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81146417 7 - 96509753 AACAACA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76402530 7 + 90941950 aacaaca i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18671490 7 + 33263144 AACAACA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198377957 7 + 210400635 AACAACA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40990011 7 - 69331447 AGCAACA i canFam3.chr10 C 0 C 0 e mm10.chr15 77207184 0 + 104043685 C a score=585927.000000 s hg38.chr22_KI270876v1_alt 222506 171 + 263666 AACGACAGAGATAGGGTTTGGGAGTTGGTGTACACATACTGTACT---------------TGTGCACTGGCCAAAACACTGCTACTACTGATGTCATTCAGAGAATAGACCCAGAAACTTCT-GTGAATGGTG--GTTACCTTCTATGATGTCTAAACTAAGCTCTAGATGTATATATACATGGAGAAA---- s panTro4.chr22 34602217 171 + 49737984 AACGACAGAGATAGGGTTTGGGAGTTGGTGTACACATACTGTACT---------------TGTGCACTGGCCAAAACACTGCTACTACTGATGTCATTCAGAGAATAGACCCAGAAACTTCT-GTGAATGGTG--GTTACCTTCTATGATGTCTAAACTAAGCTCTAGATGTATATATACATGGAGAAA---- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31022016 167 + 46535552 AACGACAGAGATAGGGTTTGGGAGTTGGTGTACACATACTGTACG---------------TGTGCACTGGCCAAAACACTGCTACTACTGATGTCATTAAGAGAAGAGACCCAGAAACTTCT-GTGAATGGTG--GTTACCTTCTATGATGTCTAAACTAAGCTCTAGATG----TATACATGGAGAAA---- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100575839 167 - 115148730 AACGACAGATATAGGGTTTGGGAGTTGGTGTACACATACTGTACG---------------TGTGCACTGGCCAAAACACTGCTACTACTGATGTCATTAAGAGAATAGACCCAGAAACTTCT-GTGAATGGTG--GTTACCTTCTATGATGTCTAAACTAAGCTCTAGATG----TATACATGGAGAAA---- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80719859 167 + 95678458 AATGACAGAGATAGGGTTTGGGAGTTGGTGTACACATACTGTACA---------------TGTGCACTGGCCAAAACACTGCTACTACTGACGTCATTAAGAGAACAGACCCAGAAACTTCT-GTGAATAGTG--GTTACCTTCTATAATGTCTAAACTAAGCTCTAGATG----TATACATGGAGAAA---- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81146424 167 - 96509753 AATGACAGAGATAGGGTTTGGGAGTTGGTGTACACATACTGTACA---------------TGTGCACTGGCCAAAACACTGCTACTACTGACGTCATTAAGAGAACAGACCCAGAAACTTCT-GTGGATAGTG--GTTACCTTCTATAATGTCTAAACTAAGCTCTAGATG----TATACATGGAGAAA---- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76402537 167 + 90941950 aatgacaGAGATAGGGTTTGGGAGTTGGTGTACACATACTGTACA---------------TGTGCACTGGCCAAAACACTGCTACTACTGACGTCATTAAGAAAATAGACCCAGAAACTTCT-ATGAATAGTG--GTTACCTTCTATAATGTCTAAACTAAGCTCTAGATG----TATACATGGAGAAA---- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18671497 167 + 33263144 AATGACAGAGATAGGGTTTGGGAGTTGGTGTACACATACTGTACA---------------TGTGCACTGGCCAAAACACTGCTACTACTGACGTCATTAAGAGAATAGACCCAGAAACTTCT-GTGAATAGTG--GTTACCTTCTATAATGTCTAAACTAAGCTCTAGATG----TATACATGGAGAAA---- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198377964 182 + 210400635 AACGACAAATACAGGGTTTGGGAGTTGGTGTACACATACTGTACATAAGTTTCCGATGGCTGTGCACTGGCCGAAACACTGCTATTACTGATGTCATTAAGAGAATAGACCCAGAAACTTGT-GTGAACGGTG--GTTACTTTCTATGATGTCTAAAATAAGCTCCAGATT----TATACAAGGAGAAA---- i calJac3.chr1 C 0 C 0 s mm10.chr15 77207184 141 + 104043685 AAAGGCAGAGAGAGGA-CTGTGACTTGGAATAAACATGCT--------------------GAGGCAATGGCCACAGC--------------TGGCAGTAGGTGA-------CAGAAAGGTCC--TGAAAGGTGCAGTTATGTTCTAGGACAGCTAAAATAAGCTCTAGCCA----TATACATAAGAAAA---- i mm10.chr15 C 0 I 42 s canFam3.chr10 40990018 159 - 69331447 AATGACAGAG---------GGAACTCAGTAGACACACACTGTATG---------------TGAGCTCT----CAGAGGCTGCAGTGACGGGTGTTGCTAAGAGCATGGTTTCAGAACCCTCTTGTGAACTGTG--GTTACCTTCTATGATCTCGAAAGTGAGCTCTAGATG----TACACACGGAGAAAAGAA i canFam3.chr10 C 0 C 0 a score=403003.000000 s hg38.chr22_KI270876v1_alt 222677 120 + 263666 GCGGTCCATCTCAAAGCTAGCCTCTTGGG------AAAGGCAATTAAGTGATTTGTTAGAGCTCTTACTCCCAGTTATTA-GGAAACCCAGAGCTACCACCCCTAAAACAGAAGACTGCATTATCTT s panTro4.chr22 34602388 120 + 49737984 GCGGTCCATCTCAAAGCTAGCCTCTTGGG------AAAGGCAATTAAGTGATTTGTTAGAGCTCTTACTCCCAGTTATTA-GGAAACCCAGAGCTACTACCCCTAGAACAGAAGACTGCATTATCTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31022183 120 + 46535552 GCGGTCCATCTCAAAGCTAGCCTCTTGGG------AAAGGCAATTAAGTGATTTGTTAGAGTTCTTACTCCCAGTTATTA-GGAAACCCAGAGCTACTATCCCTAAAACAGAAAACCGCATTATCTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100576006 120 - 115148730 GCAGTCCATCTCAAAGCTAGCCTCTTGGG------AAAGGCAAGTAAGTGATTTGTTAGAGTTCTTACTCCCAGTTATTA-GGAAACCCAGAGCTACTATCCCTAAAACAGAAAACTGCATTATCTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80720026 120 + 95678458 GGGGTCCATCTCAAAATTAGCCTCTTGGG------AAAGGCAAATAAGTGATTTGTTAGAGCTCTTACTCCTAGTTATTA-GGAAACCCAGAGCTACTATCCCTAAAACAGAAAACTGCATTATCTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81146591 120 - 96509753 GGGGTCCATCTCAAAATTAGCCTCTTGGG------AAAGGCAAATAAGTGATTTGTTAGAGCTCTTACTCCTAGTTATTA-GGAAACCCAGAGCTACTATCCCTAAAACAGAAAACTGCATTATCTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76402704 120 + 90941950 GGGGTCCATCTCAAAATTAGCCTCTTGGG------AAAGGCAAATAAGTGATCTGTTAGAGCTCTTACTCCCAGTTATTA-GGAAACCCAGAGCTACTATCCCTAAAACAGAAAACTGCATTAtctt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18671664 120 + 33263144 GTGGTCCATCTCAAAATTAGCCTCTTGGG------AAAGGCAAATAAGTGATTTGTTAGAGCTCTTACTCCCAGTTATTA-GGAAACCCAGAGCTACTATCCCTAAAACAGAAAACTGCATTATCTT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198378146 120 + 210400635 GGTGTCCATCTCAAAGCTAGCCTCTTAGA------AAAGGCAAACAGGTGATTTCTAAGAGCTCTTACTTCCAGTTATTA-GGAAACCCAGAGCTACTATCCCCAAAACCGAAAACTGCATTATCTT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40990177 120 - 69331447 AGGGTGCGTCCC-AAGCTCACTTCTCCGAACAGCTACAGGAAAATTGGGGATTTACTGGAGCTCTTACTCCCAGTATTTAGGGGAACCCAGA------ACATCTAAAAGAGGAAAATGCATTATCTT i canFam3.chr10 C 0 I 39 e mm10.chr15 77207325 42 + 104043685 I a score=815382.000000 s hg38.chr22_KI270876v1_alt 222797 276 + 263666 ggctgggcgcggtgactcacacctataatcccagcaatttgggaggctgaggcaggcggatcacttgagttcaggagttcaagaccagcctggccaacatggtgaaaccccatctctgctgaaaat-------acaaaa-----attagccaggtgtggtggtgcatctgtagtctcagctactcaggaggctgaggcaggagaatcgcttgaaccctagaggcagaggttgcagtcagctgagaatgcaccactgcactccagcctgggcgacagagtgagactctg s panTro4.chr22 34602508 276 + 49737984 ggctgggcgcggtgactcacacctataatcccagcaatttgggaggctgaggcaggaggatcacttgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctgctgaaaat-------acaaaa-----attagccaggtgtggtggtgcatctgtagtctcagctactcaggaggctgaggcaggagaatcgcttgaaccctagaggcagaggttgcagtcagctgagaatgcaccactgcactccagcctgggcgacagagtgagactctg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31022303 276 + 46535552 ggctgggcgcggtggctcacacctataatcctagcaatttgggaggctgaggcaggcagatcacttgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctgctgaaaat-------acaaaa-----attagccaggagtggtggtgcatctgtagtctcagctactcaggaggctgaggcaggagaatcgcttgaaccctagaggcagaggttgcagtcagctgagaatgcaccactgcactccagcctgggcgacagagtgagactctg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100576126 276 - 115148730 ggctgggcgcagtggctcacacctataatcccagcaatttgggaggctgaggcaagtggatcacttgaggtcaggagttcaagaccagcctggtgaacatggtgaaaccccatctctgctgaaaat-------acaaaa-----attagccaggtgtggtggtgcatctgtagtctcagcaactcaggaggctgaggcaggagaatcgcttgaaccctagaggcagaggttgcagtcagctgagattgtaccactgcactccagcctaggcgacagagtgagcctctg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80720146 266 + 95678458 gactgggcacggtggctcacacccataatcccagcaatttgggaggctgaggcaggtggatcacttgaagtctggagttcaagaccagcttgat----------aaactctgtctctgctgaaaat-------acaaac-----attagccaggtgtggtgggaaatctgtagtctcagctactcaggaggctgaggcaggagaatcgcttgaaccctagaggcagaggttgcagtcagctgagattgcaccactgcactccagcctgggccatagagtgagactctg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81146711 266 - 96509753 gactgggcacggtggctcacacccataatcccagcaatttgggaggctgaggcaggtggatcacttgaagtctggagttcaagaccagcttgat----------aaaccctgtctctgctgaaaat-------acaaac-----attagccaggtgtggtggtaaatctgtagtctcagctactcaggaggctgaggcaggagaatcgcttgaaccctagaggcagaggttgcagtcagctgagattgcaccactgcactccagcctgggccatagagtgagactctg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76402824 276 + 90941950 gactgggcgcggtggctcacacccataatcccagcaatttgggaggctgaggcaggtggatcacttgaagtctggagttcaagaccagcttgaccaacatggtgaaaccctgtctctgctgaaaat-------acaaac-----attagccaggtgtggtggtaaatctgtagtctcagctactcaggaggctgaggcaggagaatcgcttgaaccctagaggcagaggttgcagtcagctgagaatgcaccactgcactccagcctgggccatagagtgagactctg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18671784 276 + 33263144 gactgggcgcggtggctcacacccataatcccagcaatttgggaggctgaggcaggtggatcacttgaagtctggagttcaagaccagcttgaccaacatggtgaaaccctgtctctgctgaaaat-------acaaac-----attagccaggtgtggtggtgcatctgtagtctcagctactcaggaggctgaggcaggagaatcgcttgaaccctagaggcagaggttgcagtcagctgagattgcaccactgcactccagcctgggccatagagtgagactctg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198378266 287 + 210400635 ggccaggcacaatggctcacacctgtaatcccggcactttgggaggctgaggcaggcggatcacttgaggtcaggaattcaagaacagcctagcgaacatggt-gaaccccatctctgctaaaaagcaagcaaacaaacaaaaaattagctgggtatggtggtacacctgtaatctcagctactcagaaggctgaggcaggagaatcacttgaatcctggaggcagaggttgcagtgagttgagactgcaccactgcactccagtctgggcaacagagtgagactctg i calJac3.chr1 C 0 C 0 e mm10.chr15 77207325 42 + 104043685 I e canFam3.chr10 40990297 39 - 69331447 I a score=126629.000000 s hg38.chr22_KI270876v1_alt 223073 73 + 263666 tctcaaaaaaaaa------------------------------------------------------------agagaagaaaaGCTGCATCATCTTAAAAGACCCATCTTTCCTTATTACGtttcaattata s panTro4.chr22 34602784 93 + 49737984 tctcaaaaaaaaa------------------------aaaa----------------gaaaagaaaagaaaagaaaaAAGAAAAGCTGCATCATCTTAAAAGACCCATCTTTCCTTATTATGtttcaattata i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31022579 96 + 46535552 tctcaaaaaaaaa-aa--------------------aaaaa----------------aaaaagaaaagaaaagaaaaaagaaaaGCTGCATCATCTTAAAAGGCCCGTCTTTCCTTATTATGtttcaattata i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100576402 97 - 115148730 tctcaaaaaaaaaaaa--------------------aaaaa----------------aaaaagaaaagaaaagaaaaaagaaaaGCTGCATCATCTTAAAAGACCCGTCTTTCCTTATTATGtttcaattata i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80720412 82 + 95678458 tctcacaaaaaaa-aa-----------------------------------------------aaagagaaagaaaa---gaaaGCTGCATTATCTTAAAAGACTCATCTTTCTTTATTATGtttcaattata i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81146977 85 - 96509753 tctcacaaaaaaa-aa--------------------------------------------aagaaaagaaaagaaaa---GAAAGCTGCATTATCTTAAAAGACTCATCTTTCTTTATTATGTTTCAATTATA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76403100 88 + 90941950 tctcacaaaaaaa-aaa-----------------------------------------aaaagaaaagaaaagaaaa---gaaagctgcaTTATCTTAAAAGACTCATCTTTCTTTATTATGTTTCAATTATA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18672060 105 + 33263144 tctcaCCAaaaaa-aaaa--------gaaaagaaaagaaaa----------------gaaaagaaaagaaaagaaaa---gaaaGCTGCATTATCTTAAAAGACTCATCTTTCTTTATTATGTTTCAATTATA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198378553 126 + 210400635 tggaaagaaagaa-aggaaaCGGTGTGGGGAGAGGGGAGGAGCAGGCAGGGGTTGGGGAGGACAAACGAATGAACAA---GAAAACTGCACTATCCTAAGAGATCTTTTTTCCCTTAT---GTTTTAGTTATA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40990336 11 - 69331447 tctcaaataaa-------------------------------------------------------------------------------------------------------------------------- i canFam3.chr10 I 39 C 0 e mm10.chr15 77207325 42 + 104043685 I a score=1827237.000000 s hg38.chr22_KI270876v1_alt 223146 489 + 263666 ctctcaaagaacttcccttacttctaactagctttctctggtatcccctcc-ctacaatttttgacgtcatgaagtcctcccatcccaaccacttttccattatctacccactccggt---------------tctgcaccc-----tctttgtccaattttgatgcc-gtgttccataattacaatctctcccttgcaaataccctcaatcatttgtcctctccatcactgccacctgacacaactccaatcctggttaaatccaattgtctgccttttct-agtgcctatgcccaatcagctgaatgttgctgaagaaaaatcacataaccaagctgactgacttcactatatattcatgatcacaaacctcaaatggacactcaacgatgccaagcaatcc-accaaagctgcccttgaaagctttcctactccccaaaatgactatttcttgcttctcctcaaacctccctcattcactcttcacta-cctactctcagctaattttctt s panTro4.chr22 34602877 489 + 49737984 ctctcaaagaacttcccttacttctaactagctttctctggtatcccctcc-ctacaatttttgacctcatgaagtcctcccatcccaaccacttttccattatctacccactccggt---------------tctgcaccc-----tctttgtccaattttgatgcc-gtgttccataattacaatctctcccttgcaaataccctcaatcatttgtcctctccatcactgccacctgacaaaactccaatcctggttaaatccaattgtctgccttttct-agtgcctatgcccaatcagctgaatgttgctgaagaaaaatcacataaccaagctgactgacttcactatatattcatgatcacaaacctcaaatggacactcaacgatgccaagcaatcc-accaaagctgcccttgaaagctttcctactccccaaaatgactatttcttgcttctcctcaaacttccctcattcactcttcacta-cctactctcagctaattttctt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31022675 489 + 46535552 ctctcaaagaacttcccttacttctaactagctttctctggtatcgtctcc-ctacaatttttgacctcatgaagtcctcccatcccaaccacttttccattatctgcccactccggt---------------tctgcaccc-----cctttgtccaattttgatgcc-gtgttccataattacaatctctcccttgcaaataccctcaatcatttgtcctctccatcactgccatctgacaaaactccaatcctggttaaatccaattgtctgccttttct-agtgcctatgcccaatcagctgaatgttgctgaagaaaaatcacataaccaagctgaatgacttcactatatattcatgatcacaaacctcaaatggacactcaacggtgccaagcaatcc-accaaagctgcccttgaaagctttcctactccccaaaatgactatttcttgcttctcctcaaacctccctcattcactcttcacta-cctactctcagctaattttctt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100576499 488 - 115148730 ctctcaaagaacttcccttacttctaactagctttctctggtatcccctcc-ctacaatttttgacctcatgaagtcctcccatcccagccacttttccattatctacccactccagt---------------tctgcaccc-----cctttgtccaattttgatgcc-gtgttccataattacaatctctcccttgcaaataccctcaatcatttgtcttctccatcactgccatctgaca-aactccaatcctggttaaatccaattgtctgccttttct-agtgcctatgcccaatcagctgaatgttgctgacgaaaaatcacatcaccaagctgactgacttcattatatattcatgatcacaaacctcaagtggacactcaacgatgccaagcaatcc-accaaagctgcccttgaaagctttcctactccccaaaatgactatttcttgcttctcctcaaacctcccgcattcactcttcacta-cctactctcagctaattttctt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80720494 489 + 95678458 ctctcaaagaacttcccttacttctaactaactttctctggtatcccctcc-ctacaatttttgacctcatgaagtcctaccatcccaaccactttttcattacctacccactccggt---------------tctgcaccc-----actttgtccaattttgatgct-gtgttccataattacaatctctcccttgcaaataccctcaatcatttgtcctctccatcactgccatctgacaaaactccaatcccggttaaatccaattgtctgccttttct-agtgcctgtgcccaatcagctgaatgttgctgaagaaaaatcacacaaccaagctgactgacttcactatatattcatgatcacaaacctcaaatggacactcaacgatgccaagcaatcc-accaaagctgcccttgaaagctttcctactccccaaaatgactatttcttgcttctcctcaaacctctctcattcgctcttcacca-cctactctcagctaattttctt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81147062 489 - 96509753 CTCTCAAAGAacttcccttacttctaactaactttctctggtatcccctcc-ctacaatttttgacctcatgaagtcctaccatcccaaccactttttcattacctacccactccggt---------------tctgcaccc-----actttgtccaattttgatgct-gtgttccataattacaatctctcccttgcaaataccctcaatcatttgtcctctccatcactgccatctgacaaaactccaatcccggttaaatccaattgtctgccttttct-agtgcctgtgcccaatcagctgaatgttgctgaagaaaaatcacacaaccaagctgactgacttcactatatattcatgatcacaaacctcaaatggacactcaacgatgccaagcaatcc-accaaagctgcccttgaaagctttcctactccccaaaatgactatttcttgcttctcctcaaacctctctcattcgctcttcacca-cctactctcagctaatTTTCTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76403188 489 + 90941950 CTCTCAAAGAACTTCCCTTACTTCTAACTAACTTTCTCTGGTATCCCCTCC-CTACAATTTTTGACCTCATGAAGTCCTACCATCCCGACCACTTTTTCATTACCTACCCACTCCGGT---------------TCTGCACCC-----ACTTTGTCCAATTTTGATGCT-GTGTTCCATAATTACAATCTCTCCCTTGCAAATACCCTCAATCATTTGTCCTCTCCATCACTGCCATCTGACAAAACTCCAATCCCGGTTAAATCCAATTGTCTGCCTTTTCT-AGTGCCTGTGCCCAATCAGCTGAATGTTGctgaagaaaaatcacataaccAAGCTGACTGACTTCACTATATATTCATGATCACAAACCTCAAATGGACACTCAACGATGCCAAGCAATCC-ACCAAAGCTGCCCTTGAAAGCTTTCCTACTCCCCAAAATGACTATTTCTTGCTTCTCCTCAAACCTCTCTCATTTGCTCTTCACCA-CCtactctcagctaattttctt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18672165 489 + 33263144 CTCTCAAAGAACTTCCCTCACttctaactaactttctctggtatccccacc-ctacaatttttgacctcatgaagtcctcccatcccaaccactttttcattacctacccactccggt---------------tctgcaccc-----actttgtccaattttgatgct-gtgttccataattacaatctctcccttgcaaataccctcaatcatttgtcctctccatcactgccatctgacaaaactccaatcccggttaaatccaactgtctgccttttct-agtgcctgtgcccaatcagctgaatgctgctgaagaaaaatcacataaccaagctgactgacttcactatatgttcatgatcacaaacctcaaatggacactcaacgatgccaagcaatcc-accaaagctacccttgaaagctttcctactccccaaaatgactatttcttgcttctcctcaaacctccctcattcgctcttcacca-cctactctcagctaattttctt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198378679 489 + 210400635 CTCTCAAATAacttcccttacttctaactaacttgctctagtatcccctccactacaatttttgacttcatgaagtcctcccatctcaaccactttttcattatccacctactcttgt---------------tctgcacct-----cctttgtccaactttgatgcc-gtg-tccataattataatctcacccttgcaaataccctcaatcatttgtcctctccatcactgccacctgacaaaactccaatcctggttaaatgcaattatctgcattttct-agtgcctatgcccaatcagctgaaggttgctggagaaaaatcacataaccaagctgactgacctcactatgtaattatgatcacaaacctcaaatggacactcaatgatgcctagtaatcctaccaaagctacccttgtaaattttcctactccccaaaatgacta-ttcttgcttctcctcaaacctccttcatttgctcttcacta-ctcactctcagctaattttctt i calJac3.chr1 C 0 C 0 s mm10.chr15 77207367 414 + 104043685 CTCTCCAAGAACCTCCCCAAGTTCTGGCTG----TCTCTGGCTTCCCCACC---ATAGCTGTAGACCTCAAGACACTCTCCTGCCCCGGCTGCTCTTGCACTA-CTACCCACTCCAGT---------------TCTGTCTTCCAAGGCCTCTGTCCAACTTTGATTCC-AGGAACCATGATTATAACCCCTACCTTGCAAACACCCTCAAGAATTAACTCT---CATCACTG--------------------CCTGGTTGAATGCAAGGCTCTGTCTCCTCTGAGTGAGCAT---CACACAACCTGATGTTACAAAAGGCAAGTCGCACAGCCA---------ATGTCACTGTGTATTCACAACTGC--ACTGCAAA-----------------CTGGTGACCC----------------TAAGGCTTCTGCACTCTCTAAGATGACTTTTTTTTTTTTTTTTTGG-----CCTTCATTCTCTCCTTATCA-TCTACTCTTAGCTGATGCTCTC i mm10.chr15 I 42 I 376 s canFam3.chr10 40990347 478 - 69331447 ------------ctcccacacttgcaagttactcgctctggtaccccctccagtacaatttctgccctcctgggaagtccccatcccgaccactttttcattatctacccactccattgggtagatgtgtctccctttccct-----cctctgtgcaactgtgattccaatggtccattattataatccctccc-tgcaaataccctcaatcgtgtgtcctctccatccctgccacgtggcaaaactccaaacccggtgaaa--cagtgatctgccttatct--gtgcctgtgcccacacagctgaatgctgctggaaaaagatcacataaccacgctgaccaacccaa---------catgatcacaaagctgaactgggcctctcacagtgccaagcaatcccaccaaagctgcccctgtaagctt-cctactctctaggatgattcttac---cttctcctcaaacctatttcattctctccccaccattcaactttcagctgttgctct- i canFam3.chr10 C 0 C 0 a score=529531.000000 s hg38.chr22_KI270876v1_alt 223635 215 + 263666 atttta-ctttttgtctgtttgttttgagacaggatctca-------ctctgtcgcccaggctggagtgcagtggtgcgatcatggctcactgcagccttgacctcccgggctcaaa----------ctattctcccacctcagcctcccaagtg---gctggaactacatgcacatg-----ccaccacgcccagctaatt-aa---------aaaaaaaaaaaaaaaatttagagaaggggcgggtctc s panTro4.chr22 34603366 197 + 49737984 atttta-ttttttgtctgtttgttttgagacaggatctca-------ctctgtcgcccaggctggagtgcagtggtgcgatcatggctcactgcagccttgacctcccgggctcaaa----------------------------ctcccaagtg---gctggaactacatgcacatg-----ccaccacgcccagctaatt-aa---------aaaaaaaaaaaaaaaatttagagaaggggcgggtctc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31023164 216 + 46535552 atttta-ttttttgtctgtttgttttgagacaggatctca-------ctctgtcgcccaggctggagtgcagtggtgcgatcatggctcactgcagccttgacctcctgggctcaaa----------ctattctcccacctcagcctcccaagtg---gctggaactacatgcacatg-----ccaccacgctcagctaattaaa---------aaaaaaaaaaaaaaaatttagagaaggggcgggtctc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100576987 224 - 115148730 atttta-ttttttgtctgtttgttttgagacaggatctca-------ctctgtcacccaggctggagtgcagacgcgcgatcacggctcactgcagccttgacctcctgggctcaaa----------ctattctcccacctcagcctcccaagtg---gctggaattacatgcacacg-----ccaccatgcccagctaatt-aaaaacaaaacaaaacaaaacaaaacatttagagaaggggcgggtctc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80720983 218 + 95678458 attGTAtttttttgtctgtttgttttgagacaggatctca-------ctctgttgcccaggctggagtgcggtggcggcatcgtggctcactgcagccttgacctcctgggctcaaactatttcaaactattctcccacgtcagcctcccaagtg---gctggga-tacaagcacatg-----ccaccactcc-----agct------------aaaaaaaaaaaaaaaaattagagagggggcgggtctc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81147551 218 - 96509753 ATTGTAtttttttgtctgtttgttttgagacaggatctca-------ctctgttgcccaggctggagtacagtggcggcatcgtggctcactgcagccttgacctcctgggctcaaactatttcaaactattctcccacgtcagcctcccaagtg---gctggga-tacaagcacatg-----ccaccactcc-----agct------------aaaaaaaaaaaaaaaaattagagaaggggcgggtctc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76403677 220 + 90941950 attgtatttttttgtctgtttgttttgagacaggatctca-------ctctgttgcccaggctggagtgcagtggcggcatcgtggctcactgcagccttgacctcctgggctcaaactatttcaaactattctcccacgtcagcctcccaagtg---gctggga-tacaagcacatg-----ccaccacgcc-----agct-aa---------aaaaaaaaaaaaaaaaattagagaaggggcggctctc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18672654 219 + 33263144 attGTA-ttttttgtctgtttgttttgagacaggatctca-------ctctgttgcccaggctggagtgcagtggcggcatcgtggctcactgcagccttgacctcctgggctcaaactatttcaaactattctcccacgtcagcctcccaagtg---gctggga-tacaagcacatg-----ccactacgcc-----agtt-aa---------aaaaaaaaaaaaaaaaattagagaaggggcgggtctc i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198379168 207 + 210400635 ctcttatttttttaactg-ttgttttgagacaggatccca-------ctctgtcacccaggctggagtgcagtggcacaatcatgattcactgcagccttgacctcctggg-gcaaa----------ctattctcccgattcagcctcccaagtg---gctggaactacaagcacatg-----ccaccacgctc----agct-aa------------taaaaaaaaaaaatgtagagaagaggtaggtctt i calJac3.chr1 C 0 C 0 s canFam3.chr10 40990825 192 - 69331447 atccaa-atatt-------tcattttaaaagaagcattcagaggcacctggctagctcagactgtggagcg----------tgtgact---------cttgatctcagggttataag----------------------ttcaagccccatgttgggtgcagaaattacttacacataaatctttaccaaaaataaataaat-aa---------aaataagagagaagcattcagacaagtgtcttctgtc i canFam3.chr10 C 0 I 453 e mm10.chr15 77207781 376 + 104043685 I a score=245149.000000 s hg38.chr22_KI270876v1_alt 223850 78 + 263666 actatgttgcccagactagtcttgaattcctgggttcaagcaatcttcctgccccagcctcccaaaatgcagggatta s panTro4.chr22 34603563 78 + 49737984 actatgttgcccagactagtcttgaattcctgggttcaagcaatcttcctgccccagcctcccaaaatgcagggatta i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31023380 78 + 46535552 actatgttgcccagactagtcttgaattcctgggttcaagcaatcttcctaccccagcctcccaaaatgcagggattg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100577211 78 - 115148730 actatgttgcccagactagtcttgaattcctgggttcaagcaatcctcctgccccagcctcccaaaatgcagggatta i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80721201 78 + 95678458 actatgttgcccagactagtcttgaactcctgggttcaagcaatcctcctgccccaacctcccaaaatgctgggatta i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81147769 78 - 96509753 actatgttgcccagactagtcttgaactcctgggttcaagcaatcctcctgccccaacctcccaaaatgctgggatta i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76403897 78 + 90941950 actatgttgcccagactagtcttaaactcctgggttcaagcaatcctcctgccccaacctcccaaaatgctgggatta i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18672873 78 + 33263144 actatgttgcccagactagtcttgaactcctgggttcaagcaatcctcctgccccagcctcccaaaatgctgggatta i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198379375 75 + 210400635 gctttgttgcccagactagtcttgaactcctgggttcaagcaa---tcctgccccagcctcccaaaatgctgggatta i calJac3.chr1 C 0 C 0 e mm10.chr15 77207781 376 + 104043685 I e canFam3.chr10 40991017 453 - 69331447 I a score=269620.000000 s hg38.chr22_KI270876v1_alt 223928 93 + 263666 cagccatgagccactaca---------------cacaacctcttagc--------taattttc----------------------------------------tatgtcattttaaatgagaagcattcagacagtatcttcttaccactaa-atct s panTro4.chr22 34603641 93 + 49737984 cagccatgagccactaca---------------cacaacctcttagc--------taattttc----------------------------------------tatgtcattttaaatgagaagcattcagacagtatcttcttaccactaa-atct i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31023458 93 + 46535552 cagccatgagccactaca---------------cacaacctcttagc--------taattttc----------------------------------------tgtgtcattttaaatgagaagcattcagccagtatcttcttaccactaa-atct i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100577289 93 - 115148730 cagccatgagccactaca---------------cacaacctcttagc--------taattttc----------------------------------------tatgtcattttaaatgagaagcattcagacaatatcttcttaccactaa-atct i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80721279 133 + 95678458 cagccatgagccacTATA---------------CACAACCTCTTAGC--------TAATTTTCTGCCACTACACACAACCTCTTAGCTAATTTTCTATCTAAGTATGTAATTTTAAATGAGAAGCATTCAGACAGTATCTTCTTACCACTAA-ATCT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81147847 133 - 96509753 cagccatgagccacTATA---------------CACAACCTCTTAGC--------TAATTTTCTGCCACTACACACAACCTCTTAGCTAATTTTCTATCTAAGTATGTAATTTTAAATGAGAAGCATTCAGACAGTATCTTCTTACCACTAA-ATCT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76403975 133 + 90941950 cagccttgagccactaTA---------------CACAACCTCTTAGC--------TAATTTTCTGCCAGTACACATAACCTCTTAGCTAATTTTCTATCTaagtatgtaattttaaatgagaaGCATTCAGACAGTATCTTCTTACCACTAA-ATCT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18672951 133 + 33263144 cagccgtgagccacTATA---------------CACAACCTCTTAGC--------TAATTTTCTGCCACTACACACAACCTCTTAGCTAATTTTCTATCTAAGTATGTAATTTTAAATGAGAAGCATTCGGACAGTATCTTCTTACCACTAA-ATCT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198379450 97 + 210400635 cagccataagccactaca---------------cacaacctcttagc--------taattttc--------------------------------tatctaaat-tgtcactttaaatgagaagcattcagacaat---ctcttatcactaa-atct i calJac3.chr1 C 0 C 0 s mm10.chr15 77208157 109 + 104043685 CAGCC-TGTGGCACCACAAGTGGCCCATCTGAGTACAAACTCCAAGTGTGAGTGGCAGCTTGT----------------------------------------TGTATCAATCTCTGTGAGTGGAATGCAGA-------GTCTCACCCTAAACATCT i mm10.chr15 I 376 C 0 e canFam3.chr10 40991017 453 - 69331447 I a score=971896.000000 s hg38.chr22_KI270876v1_alt 224021 276 + 263666 aatgttctataataagtaaatgattaaatgaaccctaatttttttaa-agttctcctttga-----cccctcatctccctccagctacctgctatttccctgctcaccacttcagggtaaattatcttgaaaaagttgt-tgtctatatctgtctcaatttcttcacttctcattttcttcaatctactcaaaacaaagtttccaagccctccactccattaaatcaacttatcaaggtctactacttccac----------------------------------atttatctgacctc------ttagcaggat------tcaacaa s panTro4.chr22 34603734 276 + 49737984 aatgttctataataagtaaatgattaaatgaaccctaatttttttaa-agttctcctttga-----cccctcatctccctccagctacctgctatttccctgctcaccacttcagggtaaattgtcttgaaaaaattgt-tgtctatatctgtctcaatttcttcacttctcattttcttcaatctactcaaaacaaagtttccaagccctccactccattaaatcaacttatcaaggtctactacttccac----------------------------------atttatctgacctc------ttagcaggat------tcaacaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31023551 275 + 46535552 aatgtcctataataagtaaatgattaaatgaaccttaa-ttttttaa-agttctcctttga-----cccctcatctccctccagctacctgctatttccctgctcaccatttcagggcaaattgtcttgaaaaagttgt-tgtctatatctgtctcaatttcttcacttctcattttcttcaatctactcaaaacaaagtttccaagccctccactccattaaatcaacttatcaaggtctactacttccac----------------------------------atttatctgacctc------ttagcaggat------tcaacaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100577382 275 - 115148730 aatatcctatagtaagtaaatgattaaatgaaccctaa-ttttttaa-agttctcctttga-----cccctcatctccctccagctacctgctattttcctgctcaccacttcagggtaaattgtcttgaaaaagttgt-tgtctatatctgtctcaatttcttcacttctcattttcttcaatctactcaaaacaaagtttccaagccctccactccattaaatcaacttatcaaggtctactacttccac----------------------------------atttatctgacctc------ttagcaggat------tcaacaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80721412 275 + 95678458 AATGTCCTATAATAAGTAAATGATTAAATGAACCCTAA-CTTTTTaa-agttctcctttga-----cccctcatctccctccagctacctgctatttccctgctcaccacttcagggtaaattgtcttgaaaaagttgt-tggctgtacctgtctcaattttttcacctctcatattcttcagtctactcaaaacaaagtttccaagccctccactccattaaatcgatttatcaaggtctactacttcccc----------------------------------atttatctgacctc------ttagcaggat------tcaacaa i rheMac3.chr10 C 0 I 317 s macFas5.chr10 81147980 275 - 96509753 AATGTCCTATAATAAGTAAATGATTAAATGAACCCTAA-CTTTTTaa-agttctcctttga-----cccctcatctccctccagctacctgctatttccctgctcaccacttcagggtaaattgtcttgaaaaagttgt-tggctgtacctgtctcaattttttcacctctcatattcttcagtctactcaaaacaaagtttccaagccctccactccattaaatcgatttatcaaggtctactacttcccc----------------------------------atttatctgacctc------ttagcaggat------tcaacaa i macFas5.chr10 C 0 I 310 s papAnu2.chr10 76404108 275 + 90941950 AATGTCCTATAATaagtaaatgattaaatgaaccctaa-ctttttaa-agttctctttTGA-----CCCCTCATCTCCCTCCAGCTACCTGCTATTTCCCTGCTCACCACTTCAGGGTAAATTGTCTTGAAAAAGTTGT-TGGCTGTACCTGTCTCAATTTTTTCACCTCTCATATTCTTCAGTCTACTCAAAACAAAGTTTCCAAGCCCTCCACTCCATTAAATTGATTTATCAAGGTCTACTACTTCCCC----------------------------------ATTTATCTGACCTC------TTAGCAGgat------tcaacaa i papAnu2.chr10 C 0 I 319 s chlSab2.chr19 18673084 275 + 33263144 AATGTCCTATAATAAGTAAATGATTAAATGAACCCTAA-CTTTTTaa-agttctcctttga-----cccctcatctccctccagctacctgctatttccctgctcaccacttcagggtaaattgtcttgaaaaagtagt-tggctgtacctgtctcaattttttcacctctcatattcttcagtctactcaaaacaaagtttccaagccctccactccattaaatcgatttatcaaggtctactacttcccc----------------------------------atttatctgacctc------ctagcaggat------tcaacaa i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198379547 273 + 210400635 aatgtcttataataagtaaatgactaaatgaaccctaa-ttttttca-a-ttctcctttga-----cccctcatcttccttcagctacctgctatttccctgctcactacttcagcataaataatcttgaaaaagttgt-tgtctatacctgtctcagtttcttcacccctcattttcttcaatctactcaaaacaaagtttccaagccctccactcctttaaatcaacttatcaaggtctactacttccat-----------------------------------tttatctgacctc------ttagcaggat------tcaacaa i calJac3.chr1 C 0 C 0 s mm10.chr15 77208266 245 + 104043685 AGTGACATGTTG---------GGCTGGACAGGATATGG-TCATCAAA-GGGTCTCCTTTCATCCTGTCCCTCGCACTCACATAGCCACCCACCACTTTCTTGTTCACTACTTCACAGTGAA---ACTCAAAAAAGTCATCTGGCTCTATCT-CCTCTCTATCTTCCCCTCCTTCCTTCCTCCATCTGATCA------------------------TTCATTAAGTCA----------GTCTACCTCTTCCAT-----------------------------------GCCGTCTAACCCAACCAAGTTAGCTAGCTTGGCCGTCAACTA i mm10.chr15 C 0 C 0 s canFam3.chr10 40991470 293 - 69331447 aatgtccaataacaggcaaatgactaaatgaactacgg-tTTTTAaataattctcctttga-----ccccttgcctccccacca--------tagttccctgctcac-acctcatagtaacatttctcaagtaagt----tgactacacttatctccacttcacc-cctctcttcttcttcaatctactcaaaataaagtttccaagccctccactccattaaactg----gtcaatgtcaactacttccatgtcacttaactcaatggacattttgctgtcctcaacttatctgacctc------ttagcaagat------tcaacaa i canFam3.chr10 I 453 C 0 a score=964560.000000 s hg38.chr22_KI270876v1_alt 224297 281 + 263666 agctgacaatcttcttaaaacattctcttcttct-ggcttctgagatactacaatgc-------------catttttt--ttg-----ttttttcatgcatcactggtta--ctgtttcagtatctttttatgg--------cttctccctcgacagacctctaaaaggcaagtgttccttggggttcaatcctgagtcatcttctct-----aagttgtctcatccattcccatcacttcaaataccatcaacatgttaataactaccaagttacacccctagcagagac-----ctctccccatgctccaatatgactac s panTro4.chr22 34604010 283 + 49737984 agctgacaatcttcttaaaacattctcttcttct-ggcttctgagatactacaatgc-------------catttttttgttg-----ttttttcatgcatcactggtta--ctgtttcagcatctttttatgg--------cttctccctcgacagacctctaaaaggcaagtgttccttggggttcaatcctgagtcatcttctct-----aagttgtctcatccattcccatcacttcaaataccatcaacatgttaataactaccaagttacacccctagcagagac-----ctctccccatgctccaatatgactat i panTro4.chr22 C 0 I 10 s ponAbe2.chr22 31023826 281 + 46535552 agctgacaaacttcttaaaacattctcttcttct-ggcttctgaaatactacaatgc-------------catttttt--ttg-----ttttttcatgcatcactggtta--ctgtttcagtatctttttatgg--------cttctccctcgacagacctctaaaaggcaagtgttccttggggttcaatcctgagtcatcttctct-----aagttgtctcatccattcccatcacttcaaataccatcaacatgttaataactaccaagttacacccctagcagagac-----ttctccccatgctccaatatgactac i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100577657 280 - 115148730 agctgacaatcttcttaaaacattcccttcttct-ggcttctgagacactacaatgc-------------caatttt---ttg-----tcttttcatgcatcactgatta--ctgtttcagtatctttttatgg--------cttctccctcgacagacctctaaaaggtaagtgttccttggggttcaaccctgagtcatcttctct-----aagttgtctcatccattcccatcacttcaaataccatcaacatgttaataactgccaagttacacccctagcagagac-----ctctccccatgctccaatatgactac i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80722004 286 + 95678458 agctgacaaccttcttaaaacattctcttcttct-agcttctgagatactacaatgt-------------catcttt---ttg---gtttttttcatgcatcactggcta--ctgtttcagtatctttttatgg--------cttctccctcgacagacctctaaaaggtaagtgttcctaggggttcaatcctgagtcatcttctctc-tagaagttgtctcatccattcccattacttcaaataccatcaacttgtcagtaactaccaagttacacccccagcagagac-----ctcttcccacgctccaatatgactac i rheMac3.chr10 I 317 C 0 s macFas5.chr10 81148565 286 - 96509753 agctgacaaccttcttaaaacattctcttcttct-agcttctgagatactacaatgt-------------catcttt---ttg---gtttttttcatgcatcactggcta--ctgtttcagtatctttttatgg--------cttctccctcgacagacctctaaaaggtaagtgttcctaggggttcaatcctgagtcatcttctctc-tagaagttgtctcatccattcccattacttcaaataccatcaacttgtcagtaactaccaagttacacccccagcagagac-----ctcttcccacgctccaatatgactac i macFas5.chr10 I 310 C 0 s papAnu2.chr10 76404702 288 + 90941950 agctgacAACCTTCTTAAAACATTCTCTTCTTCT-AGCTTCTGAGATACTACAATGt-------------cgtcttt---ttgtt-ttttttttcatgcatcACTGGCTA--CTGTTTCAGTATCTTTTTATGG--------CTTCTCCCTCGACAGACCTCTAAAAGGTAAGTGTTCCTAGGGGTTCAATCCTGAGTCATCTTCTCTC-TAGAAGTTGTCTCATCCATTCCCATTACTTCAAATACCATCAACTTGTCAGTAACTACCAAGTTACACCCCCAGCAGAGAC-----CTCTTCCCACGCTCCAATATGACTAC i papAnu2.chr10 I 319 C 0 s chlSab2.chr19 18673359 286 + 33263144 agctgacaaccttcttaaaacattctcttcttct-agcttctgagatactacaatgt-------------catcttt---ttg---ttttctttcatgcatcactggcta--ctgtttcagtatctttttatgg--------cttctccctcgacagacctctaaaagggaagtgttcctaggggttcaatcctgagtcatcttctctc-tacaagttgtctcatccattcccattacttcaaataccatcaacttgtcagtaactaccaagttacacccccagcagagac-----ctcttcccacgctccaatatgactac i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198379820 290 + 210400635 agctgacaacttactt-aaacacgctcttcttct-agcttctgatacactacgatgt-------------cgctattt--ttgttattgtttttcatgcatcaccggttattctgtttcagtatttctttatag--------cttctcctctgacaaacctctaaaaggacagtgttctttggagttc-atcctgagtcatcttctctc-tttgagttgtctcatccattcccatcacttcaaataccatcaacatgttaataactaccaagttatatccttagcagagac-----ctcgtcccatgctccaatatgactac i calJac3.chr1 C 0 C 0 s mm10.chr15 77208511 273 + 104043685 AGCTGACAGATTTC-TAAAATGTTC---TCCCCT-AGTTTCGAACATGCTACAGTGTGGGGATTGTGTAGTGCTGTT---TTG-----TTTTAACAT-TATCACTGGTTA--CT-CCTCAGTGGCTTTTTGGGGAATGGGGTTTTTTCCTTCATCAGA------------AAATATTCCTTATTACCCAAT-CTAAGTTGTTCTCTCC-----AAATTGCCTCCTCTGTTGCCATCAAT--------------CATGCCATTAATGACCAAGTGATGGACCAAGCCCCAACTGCCTCCCTTCCCTTGTTCTAGCATCACTAC i mm10.chr15 C 0 C 0 s canFam3.chr10 40991763 282 - 69331447 agttggcaactctctcaaaacattctctttttctaagcttctgagataccacagtcc-------------tgggttt---t-------ttcttccctgcattactgatta--cc-tctcagaggcttttcctgg--------ctattgcctcaacaaatctctaaaaaagaagtgttccttagggcttgatcctgggtcactgtcttttatctgagttatctcatccactcttattgcttcaaataccacccacatgctaataattaccaagttctacccccagcctggac-----ttctcctcatgctgcagtaagactc- i canFam3.chr10 C 0 C 0 a score=19089.000000 s hg38.chr22_KI270876v1_alt 224578 5 + 263666 ttagc s ponAbe2.chr22 31024107 5 + 46535552 ttagc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100577937 5 - 115148730 ttagc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80722290 5 + 95678458 ttagc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81148851 5 - 96509753 ttagc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76404990 5 + 90941950 TTAGC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18673645 5 + 33263144 ttagc i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198380110 5 + 210400635 tcagc i calJac3.chr1 C 0 C 0 s mm10.chr15 77208784 5 + 104043685 TTGGC i mm10.chr15 C 0 C 0 s canFam3.chr10 40992045 5 - 69331447 ttagc i canFam3.chr10 C 0 C 0 e panTro4.chr22 34604293 10 + 49737984 I a score=242990.000000 s hg38.chr22_KI270876v1_alt 224583 68 + 263666 tgtcacacaagcatgtcaaactcaacatgcccaaaattgggtccttaat--tctccaccatcaccaccct----------------- s panTro4.chr22 34604303 68 + 49737984 tgtcacacaagcatgtcaaactcaacatgcccaaaattgggtccttaat--tctccaccatcaccaccct----------------- i panTro4.chr22 I 10 C 0 s ponAbe2.chr22 31024112 68 + 46535552 tgtcacacaagcatgtcaaactcaacatgcccagaactgggtccttaat--tctccaccatcaccaccct----------------- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100577942 68 - 115148730 tgtcacacaagcatgtcaaactcaacatgcccaaaactgggtccttaat--tctccaccatcaccaccct----------------- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80722295 67 + 95678458 tgtcacacaagcatgtcaaattcaacatgcccaaaact-ggcccttaat--tctccaccatcaccaccct----------------- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81148856 67 - 96509753 tgtcacacaagcatgtcaaactcaacatgcccaaaact-ggtccttaat--tctccaccatcaccaccct----------------- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76404995 67 + 90941950 TGTCACACAAGCATGTCAAACTCAACATGCCCAAAACT-GGTCCTTAAT--actccaccatcaccaccct----------------- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18673650 67 + 33263144 tgtcacacaagcatgtcaaactcaacatgcccaaaact-ggtccttaat--tctccaccatcaccaccct----------------- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198380115 68 + 210400635 tgtcacacaagcatgtccaattcaacatgcccaaatttgggtctttaat--tctccaccATCACCAccct----------------- i calJac3.chr1 C 0 C 0 s mm10.chr15 77208789 65 + 104043685 TGTCCCACAGGCATGACAA----AATATTCCATGCTCT-GTTCTTTAACCACCACCACCATCACCACCAT----------------- i mm10.chr15 C 0 C 0 s canFam3.chr10 40992050 85 - 69331447 catctcaaagatgagtccaacataatatgcccaaaattgagctcttaat--tatccactaccactaccttgaaatctaatatatact i canFam3.chr10 C 0 C 0 a score=206521.000000 s hg38.chr22_KI270876v1_alt 224651 84 + 263666 tgaagt--------cccc------------tggtactacctgacaattatgaaagccagaaacccttccttcacccctcatccctcacatccaacc--ta-cagcaa s panTro4.chr22 34604371 84 + 49737984 tgaagt--------cccc------------tggtactacctgacaattatgaaagccagaaacccttccctcacccctcatccctcacatccaacc--ta-cagcaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31024180 84 + 46535552 tgaagt--------cccc------------tggtactacctgacaattatgaaagccagaaacccttccctcacccctcatccctcacatccaacc--ta-cagcaa i ponAbe2.chr22 C 0 M 351 s nomLeu3.chr7b 100578010 84 - 115148730 taaagg--------cccc------------tggtactacctgacaattatgaaagccagaaaccctttcctcacccctcatccctcacattcaacc--ta-cagcaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80722362 85 + 95678458 tgaagt--------cccc------------tggtactacctgacaattatgaaagccagaaacccttccctta-ccctcatccttcacatccaacctata-tagcaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81148923 85 - 96509753 tgaagt--------cccc------------tggtactacctgacaattatgaaagccagaaacccttccctta-ccctcatccttcacatccaacctata-tagcaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76405062 85 + 90941950 tGAAGT--------CCCC------------TGGTACTACCTGACAATTATGAAAGCCAGAAACCCTTCCCTTA-CCCTCATCCTTCACATCCAACCTATA-TAGcaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18673717 85 + 33263144 tgaagt--------cccc------------tggtactacctgacaattacaaaagccagaaacccttccctta-ccctcatccttcacatccaacctata-tagcaa i chlSab2.chr19 C 0 C 0 s mm10.chr15 77208854 70 + 104043685 TGAAATCTAGCATACCAC------------TGCCATTCCCT-ACCACAGTGAATGGCA--------------------CAACCTACAAGTGC-ACA--AA-TAAGGA i mm10.chr15 C 0 C 0 s canFam3.chr10 40992135 97 - 69331447 tggtgt--------tctccacctcagtaagtggtaccacctggcaactatgaaaggcagtgttccttccctgatacctcaacccccacatgaaacc--cactagcaa i canFam3.chr10 C 0 C 0 e calJac3.chr1 198380183 0 + 210400635 C a score=52864.000000 s hg38.chr22_KI270876v1_alt 224735 29 + 263666 cttc--tgtgtgtgtgacttcacttgacctc s panTro4.chr22 34604455 29 + 49737984 cttc--tgtgtgtgtgacttcacttgacctc i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100578094 31 - 115148730 cttctgtgtgtgtgtgacttcacttgacctc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80722447 31 + 95678458 gttctgtgtgtgtgtgacttcacttgatctc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81149008 31 - 96509753 gttctgtgtgtgtgtgacttcacttgatctc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76405147 31 + 90941950 gttctgtgtgtgtgtgacttcacTTGatctc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18673802 31 + 33263144 gttctgtgtgtgcgtgacttcacttgatctc i chlSab2.chr19 C 0 C 0 s mm10.chr15 77208924 31 + 104043685 CCTCTTCCTAGATGGCCATGCACCTAACTTC i mm10.chr15 C 0 I 3 s canFam3.chr10 40992232 28 - 69331447 gtcc--tgcacatctgacttctc-tgatctt i canFam3.chr10 C 0 C 0 e calJac3.chr1 198380183 0 + 210400635 C e ponAbe2.chr22 31024264 351 + 46535552 M a score=393506.000000 s hg38.chr22_KI270876v1_alt 224764 138 + 263666 cactgccttaaaccaccttaaccc-aagccaccatcatctctttcctgaatatcacactagtttccccatttccattgttgctcccttccaaaaca-ccatcacacagcagccagaga--aactctgtaaaacaaacaccag s panTro4.chr22 34604484 138 + 49737984 cactgccttaaaccaccttaaccc-aagccaccatcatctctttcctgaatatcacactagtttccccatttccattgttgctcccttccaaaaca-ccatcacacagcagccagaga--aactttgtaaaacaaacaccag i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31024615 139 + 46535552 cactgcctt-aaccaccttaacccaaagccaccatcatctcttccctgcagaaaaaactagtttccccatttccattgttgctcccttccccaacacccatcacacagcagccagaga--aactttgtaaaacaaacaccag i ponAbe2.chr22 M 351 C 0 s nomLeu3.chr7b 100578125 139 - 115148730 cactgccttaacccaccttaaccc-aagccaccatcatctctttcctgaatatcacactagtttccccatttccattgttgctcccttccaaaacactcatcacacagcagccagaaa--aactttgtaaaacaaacaccag i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80722478 135 + 95678458 cactgtc----accaccttaaccc-aagccaccatcatctctttcctgaatatcacactagttcccccatttccattgttgctcccttccaaaacactcatcacacagcagccagaga--aactttgtaaaacaaacaccag i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81149039 135 - 96509753 cactgcc----accaccttaaccc-aagccaccatcatctctttcctgaatatcacactagttcccccatttccattgttgctcccttccaaaacactcatcacacagcagccagaga--aactttgtaaaacaaacaccag i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76405178 135 + 90941950 cactgcc----accaccttaaccc-aagccaccatcatctctttcCTGAATATCACACTAGTTCCCCCATTTCCATTGTTGCTCCCTTCCAAAACACTCatcacacagcagccagaga--aacTTTGTAAAACAAACACCAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18673833 135 + 33263144 cactgcc----accaccttaaccc-aagccaagatcatctctttcctgaatatgacactagttcccccatttccattgttgctcccttccaaaacactcatcacacagcagccagaga--aactttgtaaaacaaacaccag i chlSab2.chr19 C 0 C 0 s mm10.chr15 77208958 136 + 104043685 TAATGAC----TCTCTCATAACCC--AGAGGGTAACATCTATTTCCTGGACCTCACAGTACTTTCCCCATTTCTGTCACTGCTCCCCTTCAAAATATCTACCATGCTGCAGCCACAGGACAATATCATGGCTCGCGCGCACG i mm10.chr15 I 3 C 0 s canFam3.chr10 40992260 135 - 69331447 ctctgcc----accaccttaatcc-aagccaccatcagctcctaccgagacatttccatgattcctctacttcgactgtggctcctctgcaaaacattcatcacagagcagccagagg--gagtttttaaaacaaaacccgg i canFam3.chr10 C 0 I 498 e calJac3.chr1 198380183 0 + 210400635 C a score=67874.000000 s hg38.chr22_KI270876v1_alt 224902 39 + 263666 atcttat-cactctcctacttccac------ggcat-cacattacat s panTro4.chr22 34604622 39 + 49737984 attttat-cactctcttacttctat------ggcat-cacattacat i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31024754 37 + 46535552 atcttat-cactctcctacttctac------ggcat-cacatt--tt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100578264 39 - 115148730 atcttat-cactctcctacttctac------gacat-cacattatat i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80722613 43 + 95678458 atcatat-cactctcctgcttctccg--gcaggcat-cacattacat i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81149174 43 - 96509753 atcatat-cactctcctgcttctccg--gcaggcat-cacattacat i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76405313 43 + 90941950 ATCATAT-CACTCTCCTGCTTCTCCG--GCAGGCAt-cacattacat i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18673968 43 + 33263144 atcatat-cactctcctgcttctccg--gcaggcat-cacattacat i chlSab2.chr19 C 0 C 0 s mm10.chr15 77209094 47 + 104043685 CACACACACACACACATACATCTACAATGTCGGCATACACAATGACT i mm10.chr15 C 0 C 0 e canFam3.chr10 40992395 498 - 69331447 I e calJac3.chr1 198380183 0 + 210400635 C a score=3311381.000000 s hg38.chr22_KI270876v1_alt 224941 1099 + 263666 tt---ttctttccaaactccttatgatggt-ctttaaggtcctatatgacctgctatgtgcccacttctccaacctcacttcataccat-atctc-ctctcaatcactattctaaagacact----gattttgtgtcaatt----cctctcccccataccccttaattc------------------------cctctttctgaaatccctcctcgt----tccaccttcattctttgcaagccaggctccttcttatcttttagaactcagcttaaatatcacttcctcaaataaaactctccagactcctctatctagttggaggtctttccccacaagcccgtactctctgttact-gtgccctgtttatgttcttcctagcagttacc-aaaatct-ttaattatttatgctttttttgg-------------ttacagatttctccattagaAAGTA--ATGTTTTGTGTATGTCAGATACAAC----TGAAATCTTCT---ACTATGAAAC----GCTTTATCCTTTGACTTTTTGTTAGGGAAGGTCAAAGTTATTTGCAGGAGTTTCTGGCACTCAGGCAACTGTCTAACCAAGTCCTATAAATAAAGTT-AGAGTGCTACTAATTT-CACCCTAGTTACCAAAAGGACTCACAGCTTTGCCACAGATACAAACCACAAATAAATGCTGGTAACAATGGCTTTAAAATGCTACACTGTGAAATAATCATAACGTCAATATGAAAAGGCAGTTCCAATTTAATCATTTACTTTAAGCTAAT---------CTGATAATCTACATTCCAAATTGTCTCCCTTCCAAAACTATAAATTTATTCTTCTCAGCAC-----AATAATAGCATCCCAGTTCAAGCTCTCCTCTAATCAAGCTTGCTGTATATAAGTTAGTTAACTAGAGTCTAGAActacgtcgtctaacac-gcagccagctgtcatatgtggttatgtgaatttaacttaattaaa----attaaaatttcagttactta---atactagccacatgtcaagtgctcaagagccacgtgaggatagtggctatcataatggatagggcagacataaaacatttctatcatcacagaaaggtctattagacagagctgTCctagaacacggtaataaccaggaagcaaaaaggccctctaggtatccagaat s panTro4.chr22 34604661 1103 + 49737984 ttttcttctttccaaactccttatgatggtcctttaaggtcctatatgacctgctatgtgcccacttctccaacctcacttcatgccat-atctc-ctctcaatcactattctaaagacact----gatcttgtgtcaatt----cctctcccccataccccttcattc------------------------cctctttctgaaatccctcctcgt----tccaccttcattctttgcaagccaggctccttcttatcttttagaactcagcttaaatatcacttcctcaaataaaactctccagactcctctatctagttggaggtctttccccacaagcccgtactctctgttact-gtgccctgtttatgttcttcctagcagttacc-aaaatct-ttaattatttatgcttttttttg-------------ttacagatttctgcattagaAAGTA--ATGTTTTGTGTATGTCAGATACAAC----TGAAATCTTCT---ACTATGAAAC----GCTTTATCCTTTGACTTTTTGTTAGGGAAGGTCAAAGTTATTTGTAGGAGTTTCTGGCACTCAGGCAACTGTCTAACCAAGTCCTATAAATAAAGTT-AGAGTGCTACTAATTT-CACCCTAGTTACCAAAAGGACTCACAGCTTTGCCACAGATACAAACCACAAATAAATGCTGGTAACAATGGCTTTAAAATGCTACACTGTGAAATAATCATAACGTCAATATGAAAAGGCAGTTCCAATTTAATCATTTACTTTAAGCTAAT---------CTGATAATCTACATTCCAAATTGTCTCCCTTCCAAAACCATAAATTTATTCTTCTCAGCAC-----AATAATAGCATCCCAGTTCAAGCTCTCCTCTAATCAAGCTTGCTGTATATAAGTTAGTTAACTAGAGTCTAGAGctatgtcgtctaacac-gcagccagctgtcatatgtggttatgtgaatttaacttaattaaa----attaaaatttcagttactta---atactagccacatgtcaagtgctcaagagccacgtgaggatagtggctatcataatggatagggcagacataaaacatttctatcatcacagaaaggtctattagacagagctgTCctagaacacggtaataaccaggaagcaaaaaggccctctaggtatccagaat i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31024791 1102 + 46535552 tt---ttctttccaaactccttatgatggt-ctttaaggtcctatatgatctgctatgtgcccacttctccaacctcacttcataccgt-atctc-ctctcaatcactattctaaagacact----gattttgtgtcaatt----cctctcccccacaccccttcattc------------------------cctctttctgaaatccctcctcgt----tccgccttcattctttgcaagctaggctccttcttatcttttagaactcagcttaaatatcacttcctcaaataaaactctccagactcctctatctagttggaggtctttccccacaagcccatactctctgttact-gtgccctgtttatgttcttcctagcagttacc-aaaatct-ttaattatttatgcttttttttg-------------ttacggatttctccattagaAAGTA--ATGTTTTGTGTATGTCAGATACAAC----TGAAATCTTCT---ACTATGAAAC----GTTTTATCCTTTGACTTTTTGTTAGGGAAGGTCAAAGTTATTTGTAGGAGTTTCTGGCACTCAGGCAACTGTCTAACCAAGTCCTATAAATAAAGTT-AGAGTGCTACTAATTT-CACCCTAGTTACCAAAAGGACTCACAGCTTTGCTACAGATATAAACCACAAATAAATGCTGGTATCAATGGCTTTAAAATGCTACACTTTGAAATAATCATAACGTCAATATGAGAAGGCAGTTCCAATTTAATCATTTACTTTAAGCTAAT---------CTGATAATCTACATTCCAAATTGTCTCCCTTCCAAAACTATAAATTTATTCTTCTCAGCACAATAAAATAATAGCATCCCAGTTCAAGCTCTCCTCTAATCAAGCTTGCTGTATAT--GTTAGTTAACTAGAGTCTAGAActatgtcgtctaacat-gcagccagttgtcatatgtggttatgtgaatttaacttaattaaa----attaaaatttcagttactta---atactagccacatgtcaagtgctcaagagccacgtgaggatagtggctatcataatggatagggcagacataaaacatttctatcatcacagaaaggtctattagacagagctgTCctagaacatggtaataaccaggaagcaaaaaggccctctaggtatccagaat i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100578303 1105 - 115148730 tttttttctttccaaactcctgatgatggt-ctttaaggtcctatatgacctgctatgtgcccacttctccaacctcgcttcataccat-atctc-ctctcaatcactattctaaagacact----gatcttgtatcaatt----cctctcccccacaccctttcattc------------------------cctctttctgaaacccttcctcgt----tccaccttcattctttgcaagccaggctccttcttatcttttagaactcagcttaaatatcacttcctcaaataaaactctccagactcctctatctagttggaggtctttccccacaagcccata--ctctgttact-gtgccctgtttatgttcttcctagcagttacc-aaaatct-ttaattatttatgcttttttttg-------------ttacagatttctccattagaAAGTA--ATGTTTTGTGTATGTCAGATACAAC----TGAGATCTTCT---ACTATGAAAC----GTTTTATCCTTTGACTTTTTGTTAGGGAAGGTCAAAGTTATTTGTAGGAGTTTCTGGCACTCGGGCAACTGTCTAACCAAGTCCTATAAATAAAGTT-AGAGTGCTACTAATTT-CACCCTAGTTACCAAAAGGACTCACAGCTTTGCCACAAATACAAACCACAAATAAATGCTGGTATCAATGGCTTTAAAATGCTACACTTTGAAATAATCATAATGTCAATATGAAAAGGCAGTTCCAATTTAATCATTTACTTTAAGCTAAT---------CTGATAATCTACATTCCAAATTGTCTCCCTTCCAAAACTATAAATTTATTCTTCTCAGCACAATAAAATAATAGCATCCCAGTTCAAGCTCTCCTCTAATCAAGCTTGCTGTATATCAGTTAGTTAACTAGAGTCTAGAActatgtcgtctaacac-gcagccagttgtcatatgtggttatgtgaatttaacttcattaaa----attaaaatttcagttactta---atactagccacatgtcaagtgctcaagagccacgtgaggacagtggctatcataatggatagggcagacataaaacatttctatcatcacagaaaggtctatcagacagagctgTCctagaacacggtaataaccaggaagcaaaaaggccctctaggtatccagaat i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80722656 1111 + 95678458 tttttttctttccaaactccttatgatggt-ctttaaggtcctacacgatctgctacgtgcccacttctccaatctcacttcatactgt-atctc-ctctcaatca--gttctaaagacact----gatcttgtgtcaatt----cctctcccccacaccccttcattc------------------------cctctttctgaaatccctcctcat----tccagcttcattatttgcaagacaggctccctcttctctcttagatctcagcttaaatatcacttcctcaaataaaactctccagactactctatctagttggaggtctttccccacaagcctatactctcttccact-gtgccctgtttattttcttcctagcagttacc--aaatct-ttaattatttatgcatttttttg-------------ttacaggtttcttcattagaa---A--ATGTTTTGTGTATGACAGATACAAC----TGAGATCTTCT---ACTATGAAAC----GTTTTATCCTTTGACTTTTTGTTAGGGAAGGTCAAAGTTATTTGTAGGAGTTTCTGGCACTCAGGCAACTGTCTAACCAAGTCCTATAAATAAAGTTAAGAGTGCTACTAATTT-CACCCTAGTTACCAAAAGGACTCACAGCTTTGCCACAGATACAAACCACAAATAAATGCTGGTATCAATGGCTTTAGAATGCTACGCTTTGAAATAATCATAATGTCAATATGAAAAAGGAGTTCCAATTTAATCATTTACTTTAAGCTAATCTGATAATCCTGATAATCTACATTCCAAACTGTCTCCCTTCCAAAACTATAAATTTATTCTTCTCAGCACAACAAAATAATAGTATCCCAGTTCAAGCTCTCCTCTAATCAAACTTGCTGTATATAAGTTAGTTAACTACAGTCTAAAActatgtcgtctaacac-gcagccagttgtcatatgtggttatgtgaatttaacttaattaaa----attaaaatttcagttagtta---atactagccacatgtcaagtgctcaagagtcacgtgaggacagtggctatcataatggatagggcagacataaaacatttctatcatcacagaaagttccattagacagagctgTCctagaacaccataataaccaggaagcaaaaaggccctctaagtattcagaat i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81149217 1101 - 96509753 tttttttctttccaaactccttatgatggt-ctttaaggtcctacacgatctgctaggtgcccacttctccaatctcacttcatactgt-atctc-ctctcaatca--gttctaaagacact----gatcttgtgtcaatt----cctctcccccacaccccttcattc------------------------cctctttctgaaatccctcctcat----tccagcttcattatttgcaagacaggctccttcttctctcttagatctcagcttaaatatcacttcctcaaataaaactctccagactactctatctagttggaggtctttccccacaagcctatactctcttccact-gtgccctgtttattttcttcctagcagttacc--aaatct-ttaattatttatgcatttttttg-------------ttacaggtttcttcattagaA---A--ATGTTTTGTGTATGACAGATACAAC----TGAGATCTTCT---ACTATGAAAC----GTTTTATCCTTTGACTTTTTGTTAGGGAAGGTCAAAGTTATTTGTAGGAGTTTCTGGCACTCAGGCAACTGTCTAACCAAGTCCTATAAATAAAGTT-AGAGTGCTACTAATTT-CACCCTAGTTACCAAAAGGACTCACAGCTTTGCCACAGATACAAACCACAAATAAATGCTGGTATCAATGGCTTTAGAATGCTACGCTTTGAAATAATCATAATGTCAATATGAAAAAGGAGTTCCAATTTAATCATTTACTTTAAGCTAAT---------CTGATAATCTACATTCCAAACTGTCTCCCTTCCAAAACTATAAATTTATTCTTCTCAGCACAACAAAATAATAGTATCCCAGTTCAAGCTCTCCTCTACTCAAACTTGCTGTATATAAGTTAGTTAACTACAGTCTAAAActatgtcgtctaacac-gcagccagttgtcatatgtggttatgtgaatttaacttaattaaa----attaaaatttcagttagtta---atactagccacatgtcaagtgctcaagagtcacgtgaggacagtggctatcataatggatagggcagacataaaacatttctatcatcacagaaagttccattagacagagctgTCctagaacaccataataaccaggaagcaaaaaggccctctaagtattcagaat i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76405356 1113 + 90941950 tttttttctttccaaactcCTTATGATGGT-CTTTAAGGTCCTACACGATCTGCTAGGTGCCCACTTCTCCAATCTCACTTCATACCGT-ATCTC-CTCTCAATCA--GTTCTAAAGACACT----GATCTTGTGTCAATT----CCTCTCCCCCACACCCCTTCATTC------------------------CCTCTTTCTGAAATCCCTCCTCAT----TCCAGCTTCATTATTTGCAAGACAGGCTCCTTCTTCTCTCTTAGATCTCAGCTTAAATATCACTTCCTCAAATAAAACTTTCCAGACTACTCTATCTAGTTGGAGGTCTTTCCCCACAAGCCTATACTCTCTTCCACT-GTGccctgtttattttcttcctagcaGTTACC--AAATCT-TTAATTATTCATGCAtttttttG-------------TTACAGGTTTCTTCATTAGAAAGTA--ATGTTTTGTGTATGACAGATACAAC----TGAGATCTTCT---ACTATGAAAC----GTTTTATCCTTTGACTTTTTGTTAGGGAAGGTCAAAGTTATTTGTAGGAGTTTCTGGCACTCAGGCAACTGTCTAACCAAGTCCTATAAATAAAGTT-AGAGTGCTACTAATTT-CACCCTAGTTACCAAAAGGACTCACAGCTTTGCCACAGATACAAACCACAAATAAATGCTGGTATCAATGGCTTTAGAATGCTACGCTTTGAAATAATCATAATGTCAATATGAAAAAGGAGTTCCAATTTAATCATTTACTTTAAGCTAATCTGATAATCCTGATAATCTACATTCCAAACTGTCTCCCTTCCAAAACTATAAATttattcttctcagcacaacaAAATAATAGTATCCCAGTTCAAGCTCTCCTCTAATCAAACTTGCTGTATATAAGTTAGTTAACTACAGTCTAAAACTATGTCGTCTAACAC-GCAGCCAGTTGTCATATGTGGTTATGTGaatttaacttaattaaa----attaaaatttcagttagttA---ATACTAGCCACATGTCAAGTGCTCAAGAGTCACATGAGGACAGTGGCTATCATAATGGATAGGGCAGACATAAAACATTtctatcatcacagaaagttccaTTAGACAGAGCTGTCCTAGAACACCATAATAACCAGGAAGCAAAAAGGCCCTGTAAGTATCCAGAAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18674011 1106 + 33263144 tttttttctttccaaactccttatgatggt-ctttaaggtcctacacgacctgctaggtgcccacttctccaatctcacttcataccgt-atctc-ctctcaatcactgttttaaagacact----gatcttgtgtcaatt----cctctcccccacaccccttcattc------------------------cctctttctgaaatccctcctcat----tccagcttcattatttgcaagacaggatccttcttatctcttagatctcagcttaaatatcacttcctcaaataaaactctctagactactctgtctagttggaggtctttccccacaagcctacactctcttccact-gtgccctgtttattttcttcctagcagttacc--aaatct-ttaattatttatgcatttttttg-------------ttacagctttcttcattagaaagta--aTGTTTTCTGTATGACAGATACAAC----TGAGATCTTCT---ACTATGAAAC----GTTTTATCCTTTGACTTTTTGTTAGGGAAGGTCAAAGTTATTTGTAGGAGTTTCTGGCACTCAGGCAACTGTCTAACCAAGTCCTATAAATAAAGTT-AGAGTGCTACTAATTT-CACCCTAGTTACCAAAAGGACTCACAGCTTTGCCACAGATACAAACCACAAATAAATGCTGGTATCAATGGCTTTAGAATGCTACACTTTGAAACAATCATAACATCAATATGAAAAAGGAGTTCCAATTTAATCATTTACTTTAAGCTAAT---------CTGATAATCTACATTCCAAACTGTCTCCCTTCCAAAACTATAAATTTATTCTTCTCAGCACAACAAAATAATAGTATCCCAGTTCAAGCTCTCCTCTAATCAAACTTGCTGTATGTAAGTTAGTTAACTACAGTCTAAAActatgtcgtctaacac-gcagccagttgtcatatgtggttatgtgaatttaacttaattaaa----attaaaatttcagttagtta---atactagccacatgtcaagtgctcaagagtcacgtgaggacagtggctatcataatggatagggcagacataaaacatttctatcatcacagaaagttccattagacagagctgTCctagaacaccataataaccaggaagcaaaaaggccctttaagtatccagaat i chlSab2.chr19 C 0 C 0 s mm10.chr15 77209141 979 + 104043685 TC---TTCTATCCAAACTC------------CTTTAATGTCCT---------------------------CAACCTCATTTCAAGCCAT--TATC-TCCTCCATCACTGCTCTGAATACACT--GGGGTCTTATGCCAGTT----CCCAATCCAGAAAAC---TCCATC------------------------CCTCTCCCCCAAACTCTAAACCCT----TTCA--TTCCTTCCTCTCCAGGCTGGCTCC-TGTTACCTTTCATGT-----TTTAAATACCCTTCCCTGAAATAAGACTCCCCAG-CTCCTCCATCTACAT-GAGGCCTTCCCTCCCAACCCTTGGTCCTCTATTCCC-ATGCCCTGACTCTCTTCTTCCTGATAGCTCTATGAACTCT-GTAGACAGTT-TTCCCTTAACTG-------------TGGTAG-TTTCTCATTTAGAAAGCAGTACATCTTGTGTCAGAAAGACACAAG----TAAAACCTTCTACCACCACGGAACATTTATTTTATCCCTTGACTTTTTATTAAGTAAGGTCAAAGTTATTCGTAGGCATTTCTGGCACTCA-GCAAGTGTTTAACCAAGTCCTATAAATAAAATG-AGAGTGCTACTAATTTCCCCCCTAGTTACCAAAAGGACAGAAAGCTTTACCATCACTACAAGCCATGAATAAACATCAGCACCAGTGAGTTTAA------ATAGTTGGAAATAATCATAATACTAGTATCAGAA-GCAGCTCCAATTTACTCATTTATTTTAAGCTAAT---------TTAATTACCAGGATTCCAAACTGCCT-CATTCCAATGCTGTAAATTTAT----------GCAGTATGATAAAAACCACCCAATTGAAGCGGCACTCTAATCAAACTAGGCATGTGCA--------------AGCCCAGACCTAGG--------------AGc---tggtcccatgtgactattcaaatt--actcaattcaa----agctcagttcc---------------ctggtcac-tgataagtgc--------cacacaggactggtagatatcaccttggaca-tgcaaatccaaaacattttcacca--acagaaagctgtat-ggacagagctgT--TAGAGAGTGGTAACAACCA------AAGCAGGACTCTTCAGTACACAGAAG i mm10.chr15 C 0 I 23 s canFam3.chr10 40992893 1130 - 69331447 ---ttctctatattaagtccttataatgg--ccttaaggtcctgtataatctgctaagtgcctgcctctccaagctcagtgcacatcattatctcaccttcgatcactaggctcaagccaGTTCTGGATCTAGAGCAAGTTCATCCCTCTCCCTGGCACCCCTTAAttcttttattcctttttcttttctttttttcttcttttattcctttttcttaaaatccctcctcatcctttgcaaggctgtctccctcttatctttcacacttcaacttaaaaacaact-cctcaaataaaattctccagaccactctctttagttgggggtccttctcc-caagcccata--ctctactactggtgcttggtttattttcttcctagctgatatc-aaaatctatcacttatttatttattactttggtttcttatttatttttttatttctccattaaaaaata--aTATTTTGTTTATACCAGATACAACTATGTGATACCTTCT---ACTATGGAAC----ATTTTATCCCTTGACGTTTTGTTAGGAAAGGTCAAAGTTATTTGTAGGAGTTTCTGGCACTCAGGCAACTGTCTAACCAAGTCCTATAAATAAAGTT-AGAGCGCTACTAATTT-TGCTCTAGTAACCAAAAGGACTCAAAGTTTTATCACAGCTATAAACCATAAATACATGCCTGCACCAATGGCTTTAGAATGTTA--GTTTGAAATA---ATAATATTAATATGAAAAAGCAGTTCCAATCTAATCATTTACTTTGAGGTAAT---------TTGAACATCAGCATTCCAAACTGCCTCCCTTCCAATACTATAAATGAATTCTGCACAGCA------GAAGATAGCATCCCCACCCAAACTCCACTATAATCATGCTTGCTGTACAGCAGTTAATTATCT--AGTCTAGAACCATAt-atctgacacagtagccaccagcca-------ctgtgtgaatttgatttaattagctagtactgaattttcagttccttagtcacactagccacatttcaaatgctcaagaaccacatgaggctagta------------gacagggcagatataaaacatttacactgccacaaaaagttctattggacagagctgTTCTAGAACATGGTAATAACCAGGAAGCAAA-ACGCCCCCTAAGTACTCCAAAT i canFam3.chr10 I 498 C 0 e calJac3.chr1 198380183 0 + 210400635 C a score=71414.000000 s hg38.chr22_KI270876v1_alt 226040 27 + 263666 tccaaaacattcattccaaaattttca s panTro4.chr22 34605764 27 + 49737984 tccaaaacattcattctaaaattttca i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31025893 27 + 46535552 tccaaaacattcattccaaaattttca i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100579408 27 - 115148730 tccaaaacattcattccaaaattttca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80723767 27 + 95678458 tccaaaacattcattccaaagttttca i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81150318 27 - 96509753 tccaaaacattcattccaaagttttca i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76406469 27 + 90941950 TCCAAAACATTCATTTCAAAGTTTTCA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18675117 27 + 33263144 tccaaaacattcattctaaagttttca i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40994023 23 - 69331447 ACCAAAATGTTCATGT----ACTTTCA i canFam3.chr10 C 0 C 0 e mm10.chr15 77210120 23 + 104043685 I e calJac3.chr1 198380183 0 + 210400635 C a score=1713246.000000 s hg38.chr22_KI270876v1_alt 226067 610 + 263666 tcggcaggaaaactccatcagaccttctctctgaatctatttatttttattttaggaat--atttctgtcctggttatctggctaattgtccaccaaaaatttacaaagcaaattaagaaaag-gaactgggaagC------AGTGGGGAATAAGTACCAGAGGAAAAAGGAATATTATGTTAGAGGCAGCCAACATAGGAAACAAGAAAGATGAAGAG-AAAAAAAAT--CTAAAAAGCAGGTAAAATAGATAGAT---GATATATGTC-AAAATGGTGCCAC------TTAGTAAGGCAAAACCAGCAAAAGCTCCTGAAATATTACTCTTTTATATTCCTAAACAAT-ACTGATGCTGATACCTGTGTTAAAA-CCATTT--AAAAATGCCCACTATTTTACTGTTAAGAAGAAATAAATTTTATAGTTATACAACACA---ATTTA--------------GAAGGATTTATTTCTGAAATGACTGAATCTTAAATACCTTGGTCTTTAAAGAAGGGAAAATCCTCTCAGCTGGTTAGGATACTCAGCCATGAAGAAGA----------GAAATATTCTGCA-------------CAAATTCAAGAGTTCAGTCCCTTGAATATGAATGAATGC------------------------GTTTACAGAGCAGGTATAGATATGTA-AGTAAGACATGAC s panTro4.chr22 34605791 611 + 49737984 tcagcaggaaaactccatcagaccttctctctgaatctatttatttttattttaggaat--atttctgtcctggttatctggctaattgtccaccaaaaatttacaaagcaaattaagaaaag-gaactgggaagC------AGTGGGGAATAAGTACCAGAGGAAAAAGGAATATTATGTTAGAGGCAGCCAACATAGGAAACACGAAAGATGAAGAG-AAAAAAAAT--CTAAAAAGCAGGTAAAATAGATAGAT---GATATATGTC-GAAATGGTGCCAC------TTAGTAAGGCAAAACCAGCAAAAGCTCCTGAAATATTACTCTTTTATATTCCTAAACAAT-ACTGATGCTGATACCTGTGTTAAAA-CCATTT--AAAAATGCCCACTATTTTACTGTTAAGAAGAAATAAATTTTATAGTTATACAACACA---ATTTA--------------GAAGGATTTATTTCTGAAATGACTGAATCTTAAATACCTTGGTCTTTAAAGAAGGGAAAATCCTCTCAGCTGGTTAGGATACTCAGCCATGAAGAAGA----------GAAATATTCTGCA-------------CAAATTCAAGAGTTCAGTCCCTTGAATATGAATGAATGC-----------------------TGTTTACAGAGCAGGTATAGATATGAA-AGTAAGACATGAC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31025920 611 + 46535552 tcagcaggaaaactccatcagaccttctctctgaatctatttatttttattttaggaat--atttctctcctggttatctggctaattgtccaccaaaaatttacaaagcaaattaagaaagg-gaactgggaagC------AGTGGGGAATAAGTACCAGAGGAAAAAGGAATATTATGTTAGAGGCAGCCAACACAGGAAACAAGAAAGATGAAGAG-AAAAAAAAT--CTAAAAAGCAGGTAAAATAGATAGAT---GATATATGTC-AAAATGGTGTCAC------TTAGTAAGGCAAAACCAGCAAAAGCTCCTGAAATATTACTCTTTTATATTCCTAAACAAT-ACTGATGCTGATAACTGTGTTAAAA-CTATTT--TAAAATGCCCACTATTTTACTGTTAAGAAGAAATAAATTTTATAGTTATACAACACA---ATTTA--------------GAAGGATTTATTTCTGAAATGACTGAATCTTAAATACCTTGGTCCTTAAAGAAGGGAAAATCCTCTCAGCTGGTTAGGATACTCAGCCATCAAGAAGA----------GAAATATTCTGCA-------------CAAATTCAAGAGTTCAGTCCCTTGAATATGAATGAATGC-----------------------TGTTTACAGAGCAGGTATAGATATCAA-AGTAAGACAAGAC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100579435 612 - 115148730 tcagcaggaaaactccatcagaccttctctctgaatctatttatttttattttaggaat--atttctgtcctggttatctggctaattgtccaccaaaaatttacaaagcaaattaagaaagg-gaactgggaagC------AGTGGTGAGTAAGTACCAGAGGAAAAAGGAATATTATGTTGGAGGCAGCCAACATAGGAAACAAGAAAGATGAAGAGAAAAAAAAAT--CTAAAAAGCAGGTAAAATAGATTGAT---GATATATATCAAAAATGGTGTCAC------TTAGTAAGGCAAAACCAGCAAAAGCTCCTGAAATATTATTCTTTTATATTCCTAAACAAC-ACTGATGCTGATAACTGTGTTAAAA-CCATTT--AAAAATGCCCACTATTTTACTGTTAAGAAGAAATAAATTTTATAGTTATACAACACA---ATTTA--------------GAAGGATTTATTTCTGAAATGACTGAATCTTAAATACCTTGGTCCTTAAAGAAGGGAAAATCCTCTCAGCTGGTTAGGATACTCAGCCATCAAGAAGA----------GAAATATTCTGCA-------------CAAATTCAAGTGTTCAGTCCCTTGAATATGAATGAATGC-----------------------TGTTTACAGAGCA-GTATAGATATGAA-AGTAAGACAAGGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80723794 602 + 95678458 tcagcagg-aaactccatcagaccttctctctgaatctatttatttttattttagaaat--atttctgtcctgcttatctagctaattttccaccaaaaatttacaaagcaaattaagaaagg-ggACTGGGAAGC------AGTGGGGAATAAGTAGCAGAAGATAAAGGAATACTACGTTAGAGGCAGCCAACATAGGAAACAAGAAAGATGAAGAGAAAAAAAAAT--CTAAAAAGCAGGTAAAATAGATAGAT---GATATACATC-AAAATGGTGTCAC------TTAGTAAG---------GCAAAACCTCCTGAAATATTACTCTTTTATATTCCTAAACAAT-ACTGATGCTGATAACTGTGCTAAAA-CCATTT--AAAAATGCCCACTATGTTACTGTTAAGAAGAAATAAATTTTATAGTTATACAACACA---ATTTA--------------GAAGGATTTATTTCTGAAATGACTGAATCTTAAATATCTTGGTCCTCAAAGAAGGGAAAATCCTCTCAGCTAGTCAGGATACTCAGTCATCAAGAAGA----------GAAATATTCTGTA-------------CAGATTCAAGAGTTCAGTTCCTTGAATATGAATGAATGC-----------------------TGTTTACAGAGCAGGTACAGATATGGA-AGTAAGACAAGAC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81150345 601 - 96509753 tcagcagg-aaactccatcagaccttctctctgaatctatttatttttattttagaaat--atttctgtcctgcttatctagctaattttccaccaaaaatttacaaagcaaattaagaaagg-ggACTGGGAAGC------AGTGGGGAATAAGTAGCAGAAGATAAAGGAATACTACGTTAGAGGCAGCCAACATAGGAAACAAGAAAGATGAAGAG-AAAAAAAAT--CCAAAAAGCAGGTAAAATAGATAGAT---GATATACGTC-AAAATGGTGTCAC------TTAGTAAG---------GCAAAACCTCCTGAAATATTACTCTTTTATATTCCTAAACAAT-ACTGATGCTGATAACTGTGCTAAAA-CCATTT--AAAAATGCCCACTATGTTACTGTTAAGAAGAAATAAATTTTATAGTTATACAACACA---ATTTA--------------GAAGGATTTATTTCTGAAATGACTGAATCTTAAATATCTTGGTCCTCAAAGAAGGGAAAATCCTCTCAGCTAGTCAGGATACTCAGTCATCAAGAAGA----------GAAATATTCTGTA-------------CAGATTCAAGAGTTCAGTTCCTTGAATATGAATGAATGC-----------------------TGTTTACAGAGCAGGTACAGATATGGA-AGTAAGACAAGAC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76406496 610 + 90941950 TCAGCAGG-AAACTCCATCAGACCTTCTCTCtgaatctatttatttttattttagaaat--atttctgtcCTGCTTATCTGGCTAATTTTCCACgaaaaatttacaaagcaaattaAGAAAGG-GGACTGGGAAGC------AGTGGGGAATAAGTAGCAGAGGATAAAGGAATGCTATGTTAGAGGCAGCCAACATAGGAAAcaagaaagatgaagag-aaaaaaaat--ctaaaaatcaggtaaaatagatagat---gatatatGTC-AAAATGGTGTCAC------TTAGTAAGGCAAAACCAGCAAAACCTCctgaaatattattcttttatattcctAAACAAT-ACTGATGCTGATAACTGTGctaaag-ccattt--aaaaatgccCACTATGTTACtgttaagaagaaataaattttatagttaTACAACACA---ATTTA--------------GaaggatttatttctgaaatgactGAATCTTAAATATCTTGGTCCTCAAAGAAGGGAAAATCCTCTCAGCTAGTCAGGATACTCAGTCATCAAGAAGA----------GAAATATTCTGTA-------------CAGATTCAAGAGTTCAGTTCCTTGAATATGAATGAATGC-----------------------TGTTTACAGAGCAGGTACAGATATGGA-AGTAAGACAAGAC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18675144 627 + 33263144 tcagcagg-aaactccatcagaccttctctctgaatctatttatttttattttagaaat--atttctgtcctgcttatctggctaattttccaccaaaaatttacaaagcaaattaagaaagg-ggACTGGGAAGC------AGTGGGGAATAAATAGCAGAGGATAAAGGAATACTACGTTAGAGGCAGCCAACATAGGAAACAAGAAAGATGAAGAG-AAAAAAAAT--CTAAAAAGCAGGTAAAATAGATAGAT---GATATATGTC-AAAATGGTCTCAC------TTAGTAAGGCAAAACCAGCAAAACCTCCTGAAATATTACTCTTTTATATTCCTAAACAAT-ACTGATGCTGATAACTGTGCTAAAA-CCATTT--AAAAATGCCCACTGTGTTACTGTTAAGAAGAAATAAATTTTATATTTATACAACACAAGCATTTATTTCTGAAATGACTGAATCATTTATTTCTGAAATGACTGAATCTTAAATATCTTGGTCCTCAAAGAAGGGAAAATCCTCTCAGTTAGTCAGGATACTCAGTCATCAAGAAGA----------GAAATATTCTGTA-------------CAGATTCAAAAGTTCAGTTCCTTGAATATGCATGAATGC-----------------------TGTTTACAGAGCAGGTACAGATATGGA-AGTAAGACAAGAC i chlSab2.chr19 C 0 C 0 s mm10.chr15 77210143 557 + 104043685 TGAGTGGGAAAGCTCC-CAGGGCCTTTTCTCTGAATGCG---GCTTTTAGGTTAGAAGA--ACTTCTGTCCTGGTGATGTGGCCAACTGCACACC--AGATTCA------AAATGAAGAAAGG-AATGTAGGGTGCATACATAGTGAGAAATAAAAACC-----------------TCTGCTAGAT----------------ATAAGGAAGACCCAAAG--GGAAAGAT--CTAAAAGGCAAAGAAGATAGAAACAA---AGCAAAGCAA-AACAAGGGGGTACTTGGCATTAGTAAGG-------AACACGACCCATCGCCA---CACACACCAACACTCCCAGACATC-GCC-ATGCTGACAG----GTTAAAATCCATTTTCAGAAATGCCTAC--ACTCACTGGTGAAAACAG---------AAAGTCATGTAACACT---TTCTT--------------AAAGAACTTACTTTC--AATGACT-ATTCTTAAACATCTTGGTTTCCAAA----GGGATTTCCTCTTAGCTAGTTAGGATACTCAA-CAACAACAACA----------AAACGATTCTGAATGTTCTGAATGGTTAAATTTAGGGCATCAGTTTAACTAATACGAGTGACTGC-----------------------TGCTTACAAAACAGGCAC--CTGCAAG-AGTAGGACAAGAc i mm10.chr15 I 23 I 504 s canFam3.chr10 40994046 640 - 69331447 TCAGCAGGAAAGCTCTGCCAAGCCTTCTCTC--AATCTACTTATTTTTATTTTAGAAATAAATTTCTGTCCTGCTTATCTGGCAACTTGCCCACTGAAAATTTAAAAAGGAAATCAGGAAAAGAAAAGTAGGAAAC------AGTAAGGACTCAGTACCAGAGGATAGGTGACTACCATGTCAGAGGCAGCCACAGCAGGC-ACATGAGAGACCAAAGC-AAAAAAAATCCCTAAAAAGCAGGTAAGATATCAAAATGCAGACAGATGTC-AAGATGGCACCAT------ACAATAAGGCCAAAGCAGTAGAATTTCCTGAAATATCACCCTTTTGGGT--ATAAATAATAATTGATGTTGACAC---TGCTAAAA-CCATTA--AGAAAAGTGT-CTATTATACTAAGAAAAAGAAATAAATTATATAGTTACATAATACA---TTTTA--------------CAAGTATTTATTTCCAAAATAACT------TAAACATCTTGGTGTTCAGAGAAGGGAAAATCCTCTTAGCGAGTTGGAATACACCACCACCAAAAATAACTCATTCCTAAAATATTCTGCA---------TAGTCAAATTTAA---TTCAGCTCAACCAACATAAACGAATGTTCAGTTCAACCAATACGAACAAATGTTAACAGAGCAGGGACGGATAGGGagaataacacaagat i canFam3.chr10 C 0 C 0 e calJac3.chr1 198380183 0 + 210400635 C a score=83934.000000 s hg38.chr22_KI270876v1_alt 226677 31 + 263666 TCTCCTGTTTAATGAATTATGGCTTATCCAT s panTro4.chr22 34606402 31 + 49737984 TCTTCTGTTTAACGAATTATGGCTTATCCAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31026531 31 + 46535552 TCTTCTgtttaatgaattatggcttatccat i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100580047 30 - 115148730 TCTCCTG-TTAATGAAGTATGGATTTTCCAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80724396 31 + 95678458 TCTTCTgtttaatgaattatggcttacccat i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81150946 31 - 96509753 TCTTCTgtttaatgaattatggcttacccat i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76407106 31 + 90941950 TCTTCTGTTTAATGAATTATGGCTTACCCAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18675771 31 + 33263144 TCTTTTgtttaatgaattatggcttacccat i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40994686 31 - 69331447 ccttctgttcaatgaattatggttcctccat i canFam3.chr10 C 0 I 264 e mm10.chr15 77210700 504 + 104043685 I e calJac3.chr1 198380183 0 + 210400635 C a score=1002781.000000 s hg38.chr22_KI270876v1_alt 226708 420 + 263666 ACAGTGAAACACTGAACAGTATAGCCTTGGGGGAGGGGGATGAGGAAGCTCTTAAAATACCATTATGAAATACTCTAATAGagtcatgcactgcatagcaatgtttcagtcaatgatggaacacatatgtcatggtggtcccgtaagatgataatgccatgtttttactgtgccttgtccatgcttagatatgtttaaatatgaaaatatttgccattgtgttacaattgcctacagtaatcagtagagtaacatgctgtactggtttgcagcctaaaggcattaggctgtaccatatataatatatagtcaggtatatatctag-gtttgtgtaagt----acattctatgatgttttcacaatgaagtcacctaatgacacatttctcaaaaagtatccttatcattaagccatgcatACCGC s panTro4.chr22 34606433 420 + 49737984 ACAGTGAAACACTGAACAGTATAGCCTTGGGGGAGGGGGATGAGGAAGCTCTTAAAATACCATTATGAAATACTCTAATAGagtcatgcactgcatagcaatgtttcagtcaatgatggaacacatatgccatggtggtcccataagatgataatgccatgtttttactgtgccttgtccatgcttagatatgtttaaatataaaaatatttgccattgtgttacaattgcctacagtaatcagtagagtaacaagctgtactggtttgcagcctaaaggcattaggctgtaccatatataatatatagtcaggtatatatctag-gtttgtgtaagt----acattctatgacgttttcacaatgaagtcacctaatgacacatttctcaaaaagtatccttatcattaagccatgcatACCGC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31026562 419 + 46535552 acagtgaaacactgaacagtatagccttggggga-ggggatgaggaagctcttaaaataccattatgaaatactctaatagagtcatgtactgcataacaatgtttcagtcaatgatggaacacatatgccatggtggtcccgtaagatgataatgccatatttttactgtgccttgtccatgcttagatatgtttaaatataaaaatatttgccattgtgttacaattgcctacagtaatcagcagagtaacatgctgtactggtttgcagcctaaaggcattaggctgtaccatatataatatatagtcaggtatacatctag-gtttgtgtaagt----acattccatgatgttttcacaatgaagtcacctaacgacacatttctcaaaacgtatccttatcataaagccatgcatactgc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100580077 419 - 115148730 ACAGTGAAACACTGAACAGTATAGCCTTGGGGGA--GGGGTGAGGAAGCTCTTAAAATACCATTATGAAATACTCTAATAGagtcatgcactgcataacaacgtttcagtcaatgatggaacacatatgccatggtggtcccgtaagatgataataccatatttttactgtgctttgtccatgcttagatatgtttaaatataaaaatatttgccattgtgttacaattgcctacagtattcagtagagtaacatgctgtactggtttgcagcctaaaggtattaggctgtaccatatataatatatagtcaggtatacatctagtgtttgtgtaagt----acattctatgacattttcacaatgaagtcacctaacgacacatttctcaaaacgtatccttatcattaagccatgcatACCAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80724427 421 + 95678458 acagtgaaacactgaacagtatagccttgggggagggggatgaggaagctgttaaaataccattatgaaatactctaatagagtcatacactgcctaacaatgtttcagtcaatgatggaacacatatgccatggtggtcccataagattata---tcatatttttactgtgccttttccatgcttagatatgtttaaatatacaaatatttgccattgtgttacaattgcctacagtattcagtagagtaacatgctgtattggtttgcagcctaaaggcattaggctgtaccatatatgatacatagtcaggtatacatctag-gtttgtgtaagttttcacattctattacgttttcacaatgaagtcacctaacaacacatttctcaaaatgtatccttatcattaagccatgcatactgc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81150977 421 - 96509753 acagtgaaacactgaacagtatagccttgggggagggggatgaggaagctgttaaaataccattatgaaatactctaatagagtcatgcactgcctaacaatgtttcagtcaatgatggaacacatatgccatggtggtcccataagattata---tcatatttttactgtgccttttccatgcttagatatgtttaaatatacaaatatttgccattgtgttacaattgcctacagtattcagtagagtaacatgctgtattggtttgcagcctaaaggcattaggctgtaccatatatgatacatagtcaggtatacatctag-gtttgtgtaagttttcacattctattacgttttcacaatgaagtcacctaacaacacatttctcaaaatgtatccttatcattaagccatgcatactgc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76407137 421 + 90941950 ACAGTGAAACACTGAACAGTATAGCCTTGGGGGAGGGGGATGAGGAAGCTGTTAAAATACCATTATGAAATACTCTAATAGAGTCATGCACTGCCtaacaatgtttcagtcaatgatggaacacatatgccatggtggtcccataagattata---tcatatttttactgtgccttttccatgcttagatatgtttaaatatacaaatatttgccattgtgttacaattgcctacagtattcagtagagtaacatgctGTACTGGTTTGCAGCCTAAAGGCATTAGGCTGTACCATATATGATACATAGTCAGGTAtacatctag-gtttgtgtaagttttCACATTCTATTACGTTTTCACAATGAAGTCACCTAACgacacatttctcaaaatgtatcctTATCATTAAGCCATGCATACTGC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18675802 416 + 33263144 acagtgaaacactgaacagtatagccttgggggagggggatgaggaagttgttaaaataccattatgaaatactctaatagagtcatgcactgcctaacaatgtttcagtcaatgttggaacacatacgccatggtggtcccataagattata---tcatatttttactgtgccttttccatgcttagatatgtttaaatatacaaatatttgccattgtgttacaattgcct--agtattcagtagagtaacatgctgtactggtttgcagcctaaaggcattaggctgtaccatatatgatacatagtcaggtatacatctag-gtttgtgtaagttttcacattctattatgttttcacaatgaagtcacctaacgacacatttctcaaaatgtatcctt---attaagccatgcatactgc i chlSab2.chr19 C 0 C 0 e mm10.chr15 77210700 504 + 104043685 I e canFam3.chr10 40994717 264 - 69331447 I e calJac3.chr1 198380183 0 + 210400635 C a score=1389574.000000 s hg38.chr22_KI270876v1_alt 227128 570 + 263666 ATATGTCATTAAGTGGAAAAAAGAAAGGTTTAGCAATGGTTTTAAAACCAGTGGTTTTTTAAATGGGAGGAAAAGATCAAAGGAggaattatacacaagaagtaaaaaacacccagtgcctgtaggggaaagacactg-----ggaactcaagacaggaat-----gggagagcaacttttcacgatatga-----ccattttctactt---ttaaaatattaacttatgtaaatgttatttattcaaaaTACAATAATCAT-ACATTTT-----------ATAAAAGTGAGTTCTCTATCCCTAAGAAATGTATAATCTAATGACTTACCCAGGCTTCAAAAAACAAAAG--AAAAAAAATCACACTTTTTCCTTTACCAATGGTCAGATATTTAAATATTTCACACATACTTTATTCTTACTTAAAACCTCATTCTATgg---cctggcacagtggctcatgtctgtaatcccagcactttctggggctgaggcaggcagatctcttcaggtcaggaggccagcctggccaacagag-tgaaaccccatctctactaaaaatacaaaaattagccgggcgtggtggcacacacctgttagtcca s panTro4.chr22 34606853 570 + 49737984 ATATGTCATTAAGTGGAAAAAAGAAAGGTTTAGCAATGGTTTTAAAACCAGTGGTTTTTTAAATGGGAGGAAAAGATCAAAGGAggaattatacacaagaagtaaaaaacacccagtgcctgtaggggaaagacattg-----ggaactcaagacaggaat-----gggagagcaacttttcacgatatga-----ccattttctactt---ttaaaatattaacttacgtaaatgttatttattcaaaaTACAATAATCAT-ACATTTT-----------ATAAAAGCGAGTTCTCTATCCCTAAGAAATGTATAATCTAATGACTTACCCAGGCTTCAAAAAACAAAAG--AAAAAAAATCACACTTTTTCCTTTACCAATGGTCAGATATTTAAATATTTCACACATACTTTATTCTTACTTAAAACCTCATTCTATgg---cctggcacagtggctcatgtctgtaatcccagcactttctggggccgaggcaggcagatctgttcaggtcaggaggccagcctggccaacagag-tgaaaccccatctctactaaaaatacaaaaattagccgggcgtggtggcacacacctgttagtcca i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31026981 571 + 46535552 atatgtcattaagtggaaaaaagaaaggtttagCAATGGTTTTAAAACCAGTGGTTTTTTAAATGGGAGGAAAAGATCAAAGGAGGAATTATACACAAGAAGTAAAAAACACCCAGTGCCTGTAGGGGAAAGACACTG-----GGGACTCAAGACAGAAAT-----GGGAGAGCAACTTTTCACGATATGA-----CCATTTTCTACTT---TTAAAATATTAACTTATGTAAATGTTATTTATTCAAAATACAATAATCAT-ACATTTT-----------ATAAAAGCAAGTTCTCTATCCCTAAGAAATGTATAATGTAATGACCTACCCAGGCTTCAAAAAACAAAAG-AAAAAAAAATCACGCTTTTTCCTTTACCAATGGTCAGATATTTAAATATTTCACACATACTTTATTCTTACTTAAAACCTCATTCTACTg---cctggcatagtggctcatgtctgtaatcccagcactttctggggccgaggcaggcagatctcgtcaggtcaggaggccagcctggccaacacag-tgaaaccccatctctactaaaaatacaaaaattagccaggcgtggtggcgcacacctgttagtcca i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100580496 571 - 115148730 ATATGTCATTAAGTGGAAAAAAGAAAGGTTTAGCAATGGTTTTAAAACCAGTGGTTTTTTAAATGGGAGGAAAAGCTCAAAGGAGAAATTatacacaagaagtaaaaaacaccaagtgcctgtaggggaaagacactg-----gggactcaagacaggaat-----gggagagcaacttttcatgatatga-----ccattttctactt---ttaaaatattaacttatgtaaatgttatttattcaaaaTACAATAATCCTAACCTTTT-----------ATAAAAGCGAGTTCTCTATCCCTAAGAAATGTATAATCTAATGACTTACCCAGGCTTCAAAAAACAAAAG--AAAAAAAATCACACTTTTTCCTTTACCAATGGTCAGATATTTAAATATTTCACACATACTTTATTCTTACTTAAAACCTCATTCTACgg---cctggcatagtggctcatgtctgtaatcccagcactttctggggctgaggcaggcagatctcttcaggtcaggaggccagcctggccaacagag-tgaaaccccatctctactaaaaatacaaaaattagctgggcgtggtggcacacacctgttagtcca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80724848 570 + 95678458 atatgccattaagt-gaaaaaagaaaggtttagcaatggttttaaaaccagtggttttttaaatgggaggaaaagagaaagggaggaattatacacaagaag-aaaaaacacccaatgcctgtaggggaaagacactg-----gggactcaagacaggaat-----gggagaaccacttttcacaacatga-----ccattttgtactt---ttaaaatattaacttatataaatgttatttattcaaaaaacaaTAATCAT-ACATTTT-----------AGAAAAGCTAGTTCTCTATCCCCCAAAAATGTATAATCTAATGACTTACCCAGGCTTCAAAAAACTAAAGAAAAAAAAAATCACACTTTTTCCTTTACCAATGGTCAGATATTTAAATATTTCACACAGACTTTATTCTTACTTAAAACCTCATTCTATgg---cctggcatagtggctcatgtctgtaatcccagtgctttgtggggccgaggtgggcagatctcttcaggtgaggaggtcagcctggccaacagag-tgaaaccccatctctacccaaaatacaaaaattagccaggcatggtggcgcacacctgttagcgca i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81151398 570 - 96509753 atatgccattaagt-gaaaaaagaaaggtTTAGCAATGGTTTTAAAACCAGTGGTTTTTTAAATGGGAGGAAAAGAGAAAGGGAggaattatacacaagaag-aaaaaacacccaatgcctgtaggggaaagacactg-----gggactcaagacaggaat-----gggagaacaacttttcacaacatga-----ccattttgtactt---ttaaaatattaacttatataaatgttatttattcaaaaaacaaTAATCAT-ACATTTT-----------AGAAAAGCTAGTTCTCTATCCCCCAAAAATGTATAATCTAATGACTTACCCAGGCTTCAAAAAACTAAAGAAAAAAAAAATCACACTTTTTCCTTTACCAATGGTCAGATATTTAAATATTTCACACAGACTTTATTCTTACTTAAAACCTCATTCTATgg---cctggcatagtggctcatgtctgtaatcccagtgctttgtggggccgaggtgggcagatctcttcaggtcaggaggtcagcctggccaacagag-tgaaaccccatctctacccaaaatacaaaaattagccaggcatggtggcgcacacctgttagccca i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76407558 570 + 90941950 ATATGccattaagt-gaaaaaagaaaggtttagcaaTGGTTTTAAAACCAGTGGTTTTTTAaatgggaggaaaagagaaagggaggaattatatacaagaag-aaaaaacaccCAATGCCTGTAGGGGAAAGACACTG-----GGGACTCAAGACAGGAAT-----GGGAGAACAACTTTTCACAACATGa-----ccattttgtactt---ttaaaatattaacttatgtaaatgttatttattcaaaaaacaatAATCAT-ACATTTT-----------AGAAAAGCTAGTTCTCTATCCCCAAAAAATGTATAATCTAATGACTTACCCAGGcttcaaaaaactaaagaaaaaaaaaatcacactttttCCTTTACCAATGgtcagatatttaaatatttcacacaGACTTTATTCTTACTTAAAACCTCATTCTatgg---cctggcatagtggctcatgtctgtaatcccagtgctttgtggggccgaggcgggcagatctcttcAGGTCAGGAGGTAAGCCTgcccaacagag-tgaaaccccatctctacccaaaatacaaaaattagccaggcatggtggcgcacacctgttagccca i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18676218 570 + 33263144 atatgtcattaagt-gaaaaaagaaaggtTTAGCAATGGTTTTAAAACCAGTGGTTTTTTAAATGGGAGGAAAAGAGAAAGGGAggaattatacacaagaag-aaaaaacacccagtgcctgtaggggaaagacactg-----gggactcaagacaggaat-----gggagagcaacttttcacaacatga-----ccattttgtactt---ttaaaatattaacttatgtaaatgttatttattcaaaaaacaaTAATCAT-ACATTTT-----------AGAAAAGCTAGTTCTCTATCCCCAAAAAATGTATAATCTAATGACTTACCCAGGCTTCAAAAAACTAAAGAAAAAAAAAATTACACTTTTTCCTTTACCAATGGTCAGATATTTAAATATTTCACACAGACTTTATTCTTACTTAAAACCTCATTCTATgg---cctggcatagtggctcatgtctgtaatcccagcgctttgtggggccgaggcgggcagatctcttcaggtcaggaggtcagcctggccaacagag-tgaaaccccatctctaccaaaaatacaaaaattagccaggcatggtggtgcacacctgttagccca i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40994981 460 - 69331447 agattttatttatttagaaagagagagatgt-------gtgtgagagccagggg----------aggggcagaagaggaagagagagac------agagaag----------caaatgcct------------cactgagtgcggaatccaacacaaggctcaatcaagagccagacagttaaccaactgagccacccaggtgccccTTAaactaaataattaattaat-------taattcatt-aaaatttaaaa------aaattttaaaaaGGGAAAAAAAAGGCAAGTTCTCTATCCCTAAGAAA--TATAATCTAATGGCTTATCTGGGCTTCAAAAAACTGAAA--------------------------------GGCTAAACATCTAAATATTTAACTTGTATTTTATTCTTACTAAAAAGCCCACTCTCgggatccctgg----gtggcg--------------cagcggttt--------------ggcgcctgcctttggcccagggcgcgatcctggagacccgggatcgaatcccacgtc--------------gggctcccggtgcatggag-------cctgcttctccc i canFam3.chr10 I 264 C 0 e mm10.chr15 77210700 504 + 104043685 I e calJac3.chr1 198380183 0 + 210400635 C a score=594985.000000 s hg38.chr22_KI270876v1_alt 227698 222 + 263666 gctacttgggtggctgagtcacaagaattgcttgaacccaggaagtggaggctgcagtgagccaagatcacgccactgcatcccagcctggccaacagagcaagactctgtcc--------caaacaa--acaaacaaacaaacaaaaa-aCCAA----------AAAACT--TTCTATACCATTTGAATTTCCATTTCCAACAAACTAATCAATTTTGG-AAAAAAACTCAAACTTGATCTTAAA s panTro4.chr22 34607423 222 + 49737984 gctacttgggtggttgagtcacaagaattgcttgaacccaggaagtggaggctgcagtgagccaagatcacgccactgcatcccagcctggccaacagagcaagactctgtcc--------caaaaaa--acaaacaaacaaacaaaaa-aCCAA----------AAAACT--TTCTATACCATTTGAATTTCCATTTCCAACAAACTAATCAATTTTGG-AAAAAAACTCAAACTTGATCTTAAA i panTro4.chr22 C 0 M 344 s ponAbe2.chr22 31027552 230 + 46535552 gctacttgggtggttgagtcaaaagaattgcttgaacccaggaagtggaggctgcagtgagccaagatcacgccactgcatcccagcctggccaacagaggaagactctgtcCcaaaaaaacaaacaa--acaaacaaacaaacaaaaa-accaa----------aAAACT--TTCTATACCATTTGAATTTCCATTTCCAACAAACTAATCAATTTTGG-AAAAAAACTCAAACTTGATCTTAAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100581067 216 - 115148730 gctgctcgggtggttgagtcacaagaattgcttgaacccaggaattggaggctgcagtgagccaagatcacgccactgcatcccagcctggccaacagagcaagactctgtcc------------------caaacaaacaaacaaaaa-accaa----------aaaaCTCATTCTATACCATTTGGATTTCCATTTCCAACAAACTAATCAATTTTGG-AAAAAAACTCAAACTTGATCTTAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80725418 221 + 95678458 gctactcgggtggttgagtcacaagagttgcttgaacccaggaggtggaggctgcagtgagccaagatcatgccactgcatcccagcctggccgacagagcaagactctgtcc--------cccccat---caaaaaaacaaacaaaaa---caa----------aaaaCTCATTCTATACCATTTGAATCTCCATTTCCAACAAACTAATCAATTTTGG-AAAAAAACTCAAAGTTGATCTTAAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81151968 221 - 96509753 gctactcgggtggttgagtcacaagaattgcttgaacccaggaggtggaggctgcagtgagccaagatcacgccactgcatcccagcctggccgacagagcaagactctgtcc--------cccccat---caaaaaaacaaacaaaaa---caa----------aaaaCTCATTCTATACCATTTGAATCTCCATTTCCAACAAACTAATCAATTTTGG-AAAAAAACTCAAAGTTGATCTTAAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76408128 221 + 90941950 gctactcgggtggttgagtcacaagaattgcttgaacccaggaggtggaggctgcagtgagccaagatcatgccactgcatcccagcctggccgacagagcaagactctgtcc--------cccccat---caaacaaacaaagaaaaa---caa----------aaaactcattcTATACCATTTGAATCTCCATTTCCAACAAACTaatcaattttgg-aaaaaaactCAAAGTTGATCTTAAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18676788 221 + 33263144 gctactcgggtggttgagtcacaagaattgcttgaacccaggagatggaggctgcagtgagccaagaccacgccactgcatcccagcctggccgacagagcaagactctgtcc--------cccccat---caaaaaaacaaacaaaaa---caa----------aaaaCTCATTCTATACCATTTGAATCTCCATTTCCAACAAACTAATCAATTTTGG-AAAAAAACTCAAAGTTTATCTTAAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198380183 216 + 210400635 actactcgggtggttgagtcacaagaattgcttgaaccta------aaaggctgcaatgaactgagatcatgccactgca------cctgggtgacagaatgagactcagtct------------------caaaaaaaaaaaaaaaaaTCCCAAAACAGAAAACAAAACTCATTCTGTACCATTTGAATTTCCATTTCCAACAAACTAATCAATTTTGGAAAAAAAACTCAAAGTTGAACTTAAA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40995441 120 - 69331447 --------------------------tctgcctg------------------------------------tgtctctgcctctctctctct--------------ctctgtga--------ctatcataaaaaaaaaaaaaaaaaaaaa-aTTAA----------AAAGCCCACTCTCTACTATTTGAAATTCT----------GACTAATCAA---------------------TTGATTTCAAA i canFam3.chr10 C 0 C 0 e mm10.chr15 77210700 504 + 104043685 I a score=146038.000000 s hg38.chr22_KI270876v1_alt 227920 61 + 263666 ATGGAAACTGCAGTGATCCTTACCATAATCTTGT-ATTATTTAGCTTT----TAAAAAATCTTTGC s ponAbe2.chr22 31027782 61 + 46535552 ATGGAAACTGCAGTGATCCTTATCATAATCTTGT-ATTACTTAGCTTT----TAAAAAATCTTTGC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100581283 61 - 115148730 ATGGAAACTGCAGTGATCCTTATCATAATCTTGT-ATTATTTAACTTT----TAAAAAATCTTTGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80725639 61 + 95678458 ATGGGAACTGCAGTGATCCTTATCATAATCTTGT-ATTATTCAGTTTT----TAAAAAATATTTGC i rheMac3.chr10 C 0 I 347 s macFas5.chr10 81152189 61 - 96509753 ATGGGAACTGCAGTGATCCTTATCATAATCTTGT-ATTATTCAGTTTT----TAAAAAATATTTGC i macFas5.chr10 C 0 I 348 s papAnu2.chr10 76408349 61 + 90941950 ATGGGAACTGCAGTGATCCTTATCATAATCttgt-attattcagtttt----taaaaaatatttgc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18677009 59 + 33263144 ATGGGAACTGTAGTGATCCTTATCATAATCTTGT-ATTATT--GTTTT----TAAAAAATATTTGC i chlSab2.chr19 C 0 I 347 s calJac3.chr1 198380399 63 + 210400635 ATGGAAACTGCAATGATCTTTGTCATTATCTTGT-ATTATTTAGCTTT--AAAAAAAAATCTTTGC i calJac3.chr1 C 0 C 0 s canFam3.chr10 40995561 59 - 69331447 ----AAACTACAATGATCTTTATTACTACCTCATAATTATT---TTTTGAAAAAAAAAATGTCTAC i canFam3.chr10 C 0 C 0 e mm10.chr15 77210700 504 + 104043685 I e panTro4.chr22 34607645 344 + 49737984 M a score=8852.000000 s hg38.chr22_KI270876v1_alt 227981 3 + 263666 ATA s ponAbe2.chr22 31027843 3 + 46535552 ATA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100581344 3 - 115148730 ATA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80726047 3 + 95678458 ATA i rheMac3.chr10 I 347 C 0 s macFas5.chr10 81152598 3 - 96509753 ATA i macFas5.chr10 I 348 C 0 s papAnu2.chr10 76408410 3 + 90941950 aca i papAnu2.chr10 C 0 I 1445 s chlSab2.chr19 18677415 3 + 33263144 ATA i chlSab2.chr19 I 347 C 0 s calJac3.chr1 198380462 3 + 210400635 ATA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40995620 3 - 69331447 ATA i canFam3.chr10 C 0 C 0 e mm10.chr15 77210700 504 + 104043685 I e panTro4.chr22 34607645 344 + 49737984 M a score=74617.000000 s hg38.chr22_KI270876v1_alt 227984 34 + 263666 AAAGTATATACATTTCAAGAAAAAAATCATCTTG s ponAbe2.chr22 31027846 34 + 46535552 AAGGTATATACATTTCAAGAAAAAAATCATCTTG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100581347 34 - 115148730 AAGGTATATACATTTCAAGAAAAAAATCACCTTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80726050 34 + 95678458 AAGGTATATACATTTCAAGAAAAAAATCATCTTG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81152601 34 - 96509753 AAGGTATATACATTTCAAGAAAAAAATCATCTTG i macFas5.chr10 C 0 C 0 s chlSab2.chr19 18677418 34 + 33263144 AAGGTATATACATTTCAAGAAAAAAATCATCTTG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198380465 33 + 210400635 AAGGTATATACATTTCAAGAAAAAAA-CATCTTG i calJac3.chr1 C 0 C 0 s canFam3.chr10 40995623 34 - 69331447 AAGATGTATACTCTTCAGGAACAAAAACATCTTA i canFam3.chr10 C 0 C 0 e mm10.chr15 77210700 504 + 104043685 I e panTro4.chr22 34607645 344 + 49737984 M e papAnu2.chr10 76408413 1445 + 90941950 I a score=5576.000000 s hg38.chr22_KI270876v1_alt 228018 2 + 263666 TT s panTro4.chr22 34607989 2 + 49737984 TT i panTro4.chr22 M 344 C 0 s ponAbe2.chr22 31027880 2 + 46535552 TT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100581381 2 - 115148730 TT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80726084 2 + 95678458 TT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81152635 2 - 96509753 TT i macFas5.chr10 C 0 C 0 s chlSab2.chr19 18677452 2 + 33263144 TT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198380498 2 + 210400635 TT i calJac3.chr1 C 0 I 306 s canFam3.chr10 40995657 2 - 69331447 CT i canFam3.chr10 C 0 C 0 e mm10.chr15 77210700 504 + 104043685 I e papAnu2.chr10 76408413 1445 + 90941950 I a score=1634991.000000 s hg38.chr22_KI270876v1_alt 228020 633 + 263666 GGAAAACATGgcaaagactggttgaaaatctcccagggaagccgcagaatggtcttctgtatcatgtgggagataaggctgggtcactctgataggccctGGAgctgagaatgttagtggcttcccaatatcctctcttctcttcttccttagtaacaaaaccccagttttcattttagcatattactgtacacgct-tccccagaaaaggactacatcttccatcctccactacagctacatatggccctaagactaa-ttccgactaatgagatataagcagaaatgttacatggaacttcctggaagttttcttaggtagggg---aggggacacccctcttttcttcctctcaaactgctttgtggaaagggggaaatgatggctg----------aatcatctaggcccatcctacagtcagagaagtaaacagcagtaaggatcttagatccttggtaaccagacagcgcca-tattag-cctggactgcctaatttcagacttctttttcatgaaagacaaatgaatctctctcttg-ttaagattctgtgtggggaagaggagattgttatatgcagctgaacttaatcctaaatgTTTTCAATAATAAATTA-TTTACTTTAACTTACAAATCAAAACTCGA----------t s panTro4.chr22 34607991 628 + 49737984 GGAAAACATGgcaaagactggttgaaaatctcccagggaagctgcagaatgttcttctgtatcatgtgggagataaggttgggtcactctgatagcccctGGAgctgagaatgttagtggcttcccaatatcctctcttcccttcttccttagtaacaaaaccccagttttcattttagcatattactgtacacact-tccccagaaaaggactacatcttccatcctccactacagctacgtatggccctaagactaa-ttccgactaatgagatataagcagaaatgttacgtggaacttcctggaagttttcttaggtagggg---aggggacacccctcttttcttcctctcaaactgctttgtggaaagggggaaatgatggctg----------aatcatctaggcccatcctacagtcagagaagtaaacagcagtaaggatcctagatccgtggtaaccagac-----ca-tattag-cctggactgcctaattccagacttctttttcatgaaagacaaatgaatctctttcttg-ttaagattctgtgtggggaagaggagattgttatatgcagttgaacttaatcctaaatgTTTTCAATAATAAATTA-TTTACTTTAACTTACAAATCAAAACTCGA----------t i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31027882 643 + 46535552 GGAAAACATGgcaaagactggttgaaaatctcccagggaagccgcagaatggtcttctgtatcatgtgggagataaggttgggtcactctgataggccctGGAgctgagaatgctagtggtttcccagtatcctctcttcccttcttccttagtaacaaaaccccagttttcattttagcatattactgtacacgct-tctccagaaaaggactacattttccatcctccactacagctacatatggccctaagactaa-ttccgaccaatgagatataagcagaaatgttacgtggaacttcctggaagttttcttaggtagggg---aggggacacccctcttttcttcctctcaaactgctttgtggaaagggggaaatgatggctg----------aatcatctaggcccatcctacagtcagagaagcaaacagcagtaaggatcctagatccttggtaaccagagagcacca-tattag-cctggactgcctaattccagacttctttttcatgaaagacaaatgaatctctctcttg-ttaagattctgtgtggggaagaggagattgttatatgcagctgaacttaatcctaaatgTTTTCAACAATAAATTA-TTTACTTTAACTTAAAAATCAAAACTCAAttttttttttt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100581383 633 - 115148730 GGAAAACATGGCAAAGACTGGTTGAAAATCTCCCAGGGAAGCCGCAGAATGGTCTTCCATATCATGTGGGAGATAAGGTTGGGTCACTCTGATAGGCTCTGGAgctgagaatgctagtggtttcccaatatcctctcttcccttcttccttagtaacaaaaccccagttttcattttagcatattactatacacgct-tccccagaaaaggactacatctttcatcctccactacagctacatatggccctaagactaa-ttccaaccaatgagatataagcagaaatgttacgtggaacttcctggaagttttcttaggtagggg---aggggacacccctcttttcttcctctcaaactgctttgtggaaagggggaaatgatggctg----------aatcatctaggcccatcctacagtcagagaagcaaacaggactaaggatcctagatccttggtaatcagagagcacca-tattag-cctggactgcctaattccagacttctttttcatgaaagacaaatgaatctctctcttg-ttaagattctgtgtggggaagaggagattgttacatgcagctgaacttaatcctaaatgTTTTCAACAATAAATTA-TTTACTTTAACTTACAAATCAAAACTCAA----------t i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80726086 635 + 95678458 GGAAAACATGGCAAAGACTCATTGAAAATCTCCCAGGGAAGCCACAGAATAGTCTTCTACATCATGTGGGAGATAAGGTTGGGTCACTCTGATAGGCCCTGGAgctgagaatgctagtggtttcccaatatcctctcttcccttcttccttagtaacaaaaccccagttttcattttagcatattactatacacgct-tcaccagaaaaggactacatcttccatcctccactacagctacgtatggccctaagactaa-ttccgaccaatgagatataagcagaaatgtcatgtggaacttcctggaagttttcttaggtagggg---aagggatacccctcttttcttcctctcaaactgctttgtggaaagggggaaatgatggctgaaggt-tagcaatcatctaggcccatcctacagtcagagaagcaaatagcagtaaggatcttagatccttggtaaccagagagcacca-tatcat-cctggactgcctaattccagacttctttttcatgaaagacaaatgaatctctctcttgtttaagactctgtATGGGGAAGAGGAGACTGTTATATGCAGATGAACTTAATCCTAAATGTTTTCAACAATAAATTATTTTACTTTAACTTACAAttt-------------------t i rheMac3.chr10 C 0 I 3 s macFas5.chr10 81152637 635 - 96509753 GGAAAACATGGCAAAGACTCATTGAAAATCTCCCAGGGAAGCCACAGAATAGTCTTCTACATCATGTGGGAGATAAGGTTGGGTCACTCTGATAGGCCCTGGAgctgagaatgctagtggtttcccaatatcctctcttcccttcttccttagtaacaaaaccccagttttcattttagcatattactatacacgct-tcaccagaaaaggactacatcttccatcctccactacagctacgtatggccctaagactaa-ttccgaccaatgagatataagcagaaatgtcatgtggaacttcctggaagttttcttaggtagggg---aagggatacccctcttttcttcctctcaaactgctttgtggaaagggggaaatgatggctgaaggt-tagcaatcatctaggcccatcctacagtcagagaagcaaatagcagtaaggatcttagatccttggtaaccagagagcacca-tatcat-cctggactgcctaattccagacttctttttcatgaaagacaaatgaatctctctcttgtttaagactctgtatggggaagaggagactgttatatgcagatgaacttaatcctaaatgTTTTCAACAATAAATTATTTTACTTTAACTTACAAttt-------------------t i macFas5.chr10 C 0 I 3 s chlSab2.chr19 18677454 636 + 33263144 GGAAAACATGGCAAAGACTCATTGAAAATCTCCCAGGGAAGCCACAGAATAGTCTTCTACATCATGTGGGAGATAAGGTTGGGTCACTCTGATAGGCCCTGGAGGTgagaatgctagtggtttcccaatatcctctcttcccttcttccttagtaacaaaaccccagttttcattttagcatattactatacacgct-ccaccagaaaaggactacatcttccatcctctactacagctacgtatggccctaagactaa-ttccgaccaatgagatataagcagaaatgtcatgtggaacttcctggaagttttcttaggtagggg---aagggacatccctcttttcttcctctcaaactgctttgtggaaagggggaaatgatggctgaaggt-tagcaatcatctaggcccatcctacagtcagagaagcaaacagcagtaaggatcttagatccttggtaaccagagagcaccattatcat-cctggactgcctaattccagacttctttttcatgaaagacaaatgaatctctctcttgtttaagactctgtATGGGGAAGAGGAGACTGTTATATGCAGATGAACTTAATCCTAAATGTTTTCAACAATAAATTATTTTACTTTAACTTACAAttt-------------------t i chlSab2.chr19 C 0 I 4 s calJac3.chr1 198380806 619 + 210400635 agaaaaCATGGCAAAGACTGGTTGAAAATATCCCAGGAAAGCTGCAGAATGGTATTCTATACCATGTGGGAGATAAGGTTGGGTCACTCTGATAGGCCCTGGAACTgagaatgctagtggcttcccaatatcctgtcttcccttcttccttactagcaaaaccccagttttcattttagcacattactatacatactctccccagaaaagcactgcatcttccatcctccactacagttaggtatggccctaagactaa-ttctgaccaatgagatataagcaaaaatgttacatagaatttcctggaagttttcttaagcagggggaaggggaacccccctcttttcttc--ctcaaactgctttgtggaaaggggaaaatgatggctggagga-tagcaatcatctaggcccatcctacagttagggaagcaaacagcagtaaggatcctagatccttagtcaccacagagcacca-tatcac-cctggactgcctaattccagacttcttttttatgaaagacaaatgaatctctctc----ttAAGACTCTTTGTTGGGAGGAGGAGACTGTTACATGC---TAAACTTAATCCTAAATGTTTTCAACAACAA--------------------AAATTAGAACTCAA----------T i calJac3.chr1 I 306 I 16 s canFam3.chr10 40995659 575 - 69331447 AGACAATCTAACAGAAACTGGTTGAAAAGCTCCCAGGAAAGCTACAGAACGGTCTTCTGTACCATGTGGGAGGCAATGTCAGGTCACTCTGATAGTCCAT-AAGGagaggatggtggtggtttcccaatatcctttctttcattctatcttggtaacaaaaccctagttttcattctaggacatt-tgatacacacc-ttacaaaaaaacaactgtatctcccaacctcccctgcagtgagatgtggccataagactaagttgtggctaatgggatattagtagaaatgttatatgagacttcctgaaagtcttcttaagttggga---a----------------------------------------------ggAATAAATGGCTGGAGCTGTAGCAAC-----------------CAGACAGAAAAGCAAAGAACAGTaaggatcctggatccttaataaccatggagcacca-catcagccccagactgcctacttttagacttcttttttgc-aaagacaaaagaacctctctcgcatttaagccactt-----gggggtgggttctgttatatgcaactgaacttaatcctaaGCCTTTGAATAGTTAAGTTACTTTACTATACTTTACAAATCAAAATTCAA----------- i canFam3.chr10 C 0 C 0 e mm10.chr15 77210700 504 + 104043685 I e papAnu2.chr10 76408413 1445 + 90941950 I a score=46841.000000 s hg38.chr22_KI270876v1_alt 228653 16 + 263666 ttttttttttgaaaca s panTro4.chr22 34608619 16 + 49737984 ttttttttttgaaaca i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31028525 16 + 46535552 ttttttttttgaaaca i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100582016 16 - 115148730 ttttttttttgaaata i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80726724 16 + 95678458 tcttttttttgagacg i rheMac3.chr10 I 3 C 0 s macFas5.chr10 81153275 16 - 96509753 tcttttttttgagacg i macFas5.chr10 I 3 C 0 s papAnu2.chr10 14377340 16 - 90941950 ttttttttttcagatg i papAnu2.chr10 n 1445 C 0 s chlSab2.chr19 18678094 16 + 33263144 ttttttttttgagaca i chlSab2.chr19 I 4 C 0 s calJac3.chr1 198381441 16 + 210400635 tttttttttaaagaca i calJac3.chr1 I 16 C 0 s canFam3.chr10 40996234 14 - 69331447 --TTTCATTTGAAACA i canFam3.chr10 C 0 C 0 e mm10.chr15 77210700 504 + 104043685 I a score=226902.000000 s hg38.chr22_KI270876v1_alt 228669 89 + 263666 gag--tgtcgctccgtcgcgcaggctggaatg--------------cagtggcgtgactccagctcactgcaaccttcacctcccggattcaagagattcttgtg s panTro4.chr22 34608635 89 + 49737984 gag--tgtcgctccgttgcgcaggctggaatg--------------cagtggcgtgactccagctcactgcaaccttcacctcccggattcaagagattcttgtg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31028541 89 + 46535552 gag--tgttgctccgtcgcacaggctggaatg--------------cagtggcgtgactccagctcactgcaaccttcacctcccagattcaacagattcttgtg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100582032 89 - 115148730 gag--tgtcgctccgtcgcgcaggctggaatg--------------cagtggcgtgactccggctcactgcaaccttcacctcctgaattcaagagattcttgtg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80726740 91 + 95678458 gagtctctcgctctgttacccaggctggaatg--------------cagtggcatgattctggctcactgcaagcttcacctcccggattcaagtgactcttgtg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81153291 91 - 96509753 gagtctctcgctctgttacccaggctggaatg--------------cagtggcatgattctggctcactgcaagcttcacctcccggattcaagtgactcttgtg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 14377356 103 - 90941950 gag--tctcactctgtcacccagactggaatgcagtggcacaatctcagtggcataatctcagctcactgcaaccttcgcctcccaggctcaagcgattcttgtg i papAnu2.chr10 C 0 n 0 s chlSab2.chr19 18678110 91 + 33263144 gagtctctcgctctgttacccaggctggaatg--------------cagtggcatgattctggctcactgcaagcttcacctcccggattcaagtgactcttgtg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198381457 89 + 210400635 ggc--tctcgctctgttgctcagggtggagtg--------------cagtgtcgtgatctaggctcgctgcaaccttcacctcccagattcaagtgattcttttg i calJac3.chr1 C 0 C 0 e mm10.chr15 77210700 504 + 104043685 I e canFam3.chr10 40996248 0 - 69331447 C a score=133561.000000 s hg38.chr22_KI270876v1_alt 228758 49 + 263666 ctcagcctcccaagtagctgggattacaggtacccaccaccatgcccag s panTro4.chr22 34608724 49 + 49737984 ctcagcctcccaagtagctgggattacaggtacccaccaccatgcccag i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31028630 49 + 46535552 ctcagcctcccaagtagctgggattacagttacccaccaccatgcccag i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100582121 49 - 115148730 ctcagcttcccaagtagctgggattacaggcacccaccaccatgcccag i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80726831 49 + 95678458 ctcagtctcccaagtagctgggattacaggcgcccaccaccatacccag i rheMac3.chr10 C 0 I 325 s macFas5.chr10 81153382 49 - 96509753 ctcagtctcccaagtagctgggattacaggcgcccaccaccatacccag i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76409858 49 + 90941950 ctcgacctcccaaactgctgggattacaggcttgagccaccgcgcctgg i papAnu2.chr10 I 1445 C 0 s chlSab2.chr19 18678201 49 + 33263144 ctcagtctcccaagtagctgggattacaggcgcccaccaccatacccag i chlSab2.chr19 C 0 I 319 s calJac3.chr1 198381546 49 + 210400635 ctcagcctcgcaagtagttgggattacaagcaccaatcactgtgcccag i calJac3.chr1 C 0 C 0 e mm10.chr15 77210700 504 + 104043685 I e canFam3.chr10 40996248 0 - 69331447 C a score=3600.000000 s hg38.chr22_KI270876v1_alt 228807 1 + 263666 c s panTro4.chr22 34608773 1 + 49737984 c i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31028679 1 + 46535552 c i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100582170 1 - 115148730 c i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80727205 1 + 95678458 c i rheMac3.chr10 I 325 C 0 s macFas5.chr10 81153431 1 - 96509753 c i macFas5.chr10 C 0 I 314 s papAnu2.chr10 76409907 1 + 90941950 c i papAnu2.chr10 C 0 I 1 s chlSab2.chr19 18678569 1 + 33263144 c i chlSab2.chr19 I 319 C 0 s calJac3.chr1 198381595 1 + 210400635 c i calJac3.chr1 C 0 C 0 e mm10.chr15 77210700 504 + 104043685 I e canFam3.chr10 40996248 0 - 69331447 C a score=412820.000000 s hg38.chr22_KI270876v1_alt 228808 133 + 263666 taatttttgtatttttagtggagacggg-tttttgtcacatcggccagactgatctcgaacttctgaccttaagagatctacctgcctcgacctcccaaagtgctggaattacaggtgtgagccactgtgctcT s panTro4.chr22 34608774 133 + 49737984 taatttttgtatttttagtggagacggg-tttttgtcacatcggccagactgatctcgaacttctgaccttaagagatctgcctgcctcgacctcccaaagtgctggaattacaggtgtgagccactgtgctct i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31028680 133 + 46535552 taatttttgtatttttagtggagacggg-tttttgtcacatcggccacactgatctcgaacttctgaccttaagagatctgcctgcctcgacctcccaaagtgctggaattacaggtgtgagccactgtgccct i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100582171 133 - 115148730 taatttttgtatttttagtggagacggg-tttttgtcacattggccagactgatctcgaacttctgaccttaagagatctgcctgcctcgacctcccaaagtgctagaattacaggtgtgagccactgtgccct i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80727206 133 + 95678458 taatttttgtatttttagtggagacggg-tttttgtcacgttggccacactgatcttgaacttctgaccttaagggatctgtctgccttgacctcccaaagtgctggaattacaggtgtgagccaccatgccct i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81153746 133 - 96509753 taatttttgtatttttagtggagacggg-tttttgtcacgttggccagactgatcttgaacttctgaccttaagggatctgtctgccttgacctcccaaagtgctggaattacaggtgtgagccaccatgccct i macFas5.chr10 I 314 C 0 s papAnu2.chr10 76409909 133 + 90941950 taatttttgtatttttagtggagacggg-tttttgtcacgttggccagactgatcttgaacttctgaccttaagggatctgtctgccttgacctcccaaagtgctggaattacaggtgtgagccaccatgccct i papAnu2.chr10 I 1 C 0 s chlSab2.chr19 18678570 133 + 33263144 taatttttgtatttttagtggagacggg-tttttgtcacgttggccagactgatcttgaacttctgaccttaagggatctgtctgccttgacctcccaaagtgctggaattacaggtgtgagccaccatgccct i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198381596 134 + 210400635 taatttttgtatacttagtggagacaggttttttgccatgttggccaggctgatctcgaacttctgacctcaagggatctgcctgcctcaacctcccaaaatgctggaattacaggtgtgagccaccatgcctg i calJac3.chr1 C 0 C 0 e mm10.chr15 77210700 504 + 104043685 I e canFam3.chr10 40996248 0 - 69331447 C a score=68403.000000 s hg38.chr22_KI270876v1_alt 228941 27 + 263666 ACCCAAA-----ATTCAATTTCACTTGAAACA s panTro4.chr22 34608907 27 + 49737984 gccCAAA-----ACTCAATTTCACTTGAAACA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31028813 27 + 46535552 gccCAAA-----ACTCAATTTCACTTGAGACA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100582304 27 - 115148730 gccCAAA-----ACTCAATTTCACTTAAAACA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80727339 24 + 95678458 gccCAAA-----ACTAAATTTCACTTGA---A i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81153879 24 - 96509753 gccCAAA-----ACTAAATTTCACTTGA---A i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76410042 24 + 90941950 gcccaaa-----ACTAAATTTCACTTGA---A i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18678703 24 + 33263144 gccCAAA-----ATTAAATTTCACTTGA---A i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198381730 27 + 210400635 gccCAAA-----ACTCAATTTCACTTGAAACA i calJac3.chr1 C 0 C 0 s mm10.chr15 77211204 32 + 104043685 ACTTAAAATCCCACTGAACTTCATTTGGGAGC i mm10.chr15 I 504 C 0 e canFam3.chr10 40996248 0 - 69331447 C a score=755016.000000 s hg38.chr22_KI270876v1_alt 228968 218 + 263666 ACAGAAAGCTTT-ATGCACATCAACAGTGTGCACATTT----GATGACCAAAACA-GAGACTGTCAAAGAATCTTGAAATGTCTATTTCAAATGTTTAGGCCAAGAAGTC----AACTGGTGTATCACTCTGATCTAC---------------------------TATCCATAACTATTCCACACCAAAATGATAGAAATAAAATTTTAACTTAACCATTCTTGAATTCGTATAATGAGAAACAGTCAAATATGG s panTro4.chr22 34608934 218 + 49737984 ACAGAAAGCTTT-ATGCACATCAACAGTGTGCACATTT----GATGACCAAAACA-GAGACTGTCAAAGAATCTTGAAATGTCTATTTCAAATGTTTAGGCCAAGAAGTC----AACTGGTGTATCACTCTGATCTAC---------------------------TATCCATAACTATTCCACACCAAAATGATAGAAATAAAATTTTAACTTAACCATTCTTGAATTCGTATAATGAGAAACAGTCAAATATGG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31028840 218 + 46535552 ACAGAAAGCTTT-ATGCACATCAACAGTGTGCAAATTT----GATGACCAAAACA-GAGACTGTCAAAGAATCTTGAAATGTCTATTTCAAATGTTTAGGCCAAGAAGTC----AACTGGTGTGTCACTCTGATCTAC---------------------------TATCCATAACTTTTCCACACCAAAATGATAGAAATAAAATTTTAACTTAACCATTCTTGAATTCATATAATGAGAAAGAGTCAAATATGG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100582331 218 - 115148730 ACAGAAAGCTTT-ATGCACATCAACAGTGTGCAAATTT----GATGACCAAAACA-GAGACTGTTAAAGAATCTTGAAATGTCTATTTCAAATGTTTAGGCCAAGAAGTC----AACTGGTGTATCACTCTGATCTAC---------------------------TATCCATAACTATTCCACACCAAAATGATAGAAATAAAATTTTAACTTAACCATTCTTGAATTCGTATAATGAGAAAAAGTCAAATATGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80727363 246 + 95678458 ACAGAAAGCTTT-ATGCACATCAACAGTGTGCAAACTT----GATGACCACGACAGGAGACTGTCAAAGAATCTTGAAATGTCTAGGCAGGAAGTTTAGGCCAAAAAGTC----AACTGGTGAATCACTCTGATCCACTCTGATCTACTATCCATAACTATTCCATATCCATAACTATTCCACACCAAAATGATAGAAATAAAATTTTAACTTAACCATTCTTGAATTCATATAATGAGAAAAAGTCAAATATGG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81153903 246 - 96509753 ACAGAAAGCTTT-ATGCACATCAACAGTGTGCAAACTT----GATGACCACGACAGGAGACTGTCAAAGAATCTTGAAATGTCTAGGCAGGAAGTTTAGGCCAAAAAGTC----AACTGGTGAATCACTCTGATCCACTCTGatctactatccataactattccatatccataactatTCCACACCAAAATGATAGAAATAAAATTTTAACTTAACCATTCTTGAATTCATATAATGAGAAAAAGTCAAATATGG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76410066 245 + 90941950 ACAGAAAGCTTT-ATGCACATCAACAGTGTGCAAACTT----GATGACCACGACA-GAGACTGTCAAAGAATCTTGAAATGTCTAGGCAGGAAGTTTAGGCCAAAAAGTC----AACTGGTGAATCACTCTGATCCACTCTGATCTACTATCCATAACTATTCCATATCCATAACTATTCCACAccaaaatgatagaaataaaattttaacttaaCCATTCTTGAATTCATATAATGAGAAAAAGTCAAATATGG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18678727 228 + 33263144 ACAGAAAGCTTT-ATGCACATCAACAGTGTGCAAATTT----GATGACCACGACA-GAGACTGTCAAAGAATCTTGAAATGTCTAGGCAGGAAGTTTAGGCCAAAAAGTC----AACTGGTGAATCACTCTGATCCACTCTGATCTAC-----------------TATCCATAACTATTCCACACCAAAATGATAGAAAGAAAATTTTAACTTAACCATTCTTGAATTTGTATAATGAGAAAAAGTCAAATACGG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198381757 211 + 210400635 ACAGAAAGCTTT-ATGCACATCAACAGTGTGCAAATTT----AATGACTAAAACA-GAGATTATCGAAGAATCTCGAAATGTCTAGGCAGGAAGTTTAGGCCAAAAAGTC----AATTGGTGTATCATTCTGATTAAC---------------------------TATCCATAACTATTCCACATTAGAATGATAGAAATAAAATT-----TTAATCATTCTTGAATTC--ATAATGAGAAAAAGTCAAATATGT i calJac3.chr1 C 0 C 0 s mm10.chr15 77211236 223 + 104043685 ACAGAAATTTCT-ATCCATAGCAAAAGTGTACAAATTTAATGAATGACTAACCAA-CTGTCTGTCCAAGAATCTTGAAATGTCTAAATAGGAAATCCTGGCCAAGAAGTCACCTAACCAGTCAATCCCCTTAGCTTCC---------------------------TAACCTTGAGCACTCT-CACTGAAGAATTAAAACTGAAGTT-TAACATAG-CATTACTGAGTACTGATAAGAGAAAACAGTCAAATATgg i mm10.chr15 C 0 I 522 s canFam3.chr10 40996248 193 - 69331447 ACAGAAAACTTTAATGCACATTAATAGCTTGCCTGCCT----GATGACTA---------ATTATCAAAGAATCTTTAAATATCTA-------------GGCCAAAAAGTC----AACTAGTCTATC-CCCTAATCAAC---------------------------TGTCCCTAACCATTCCACACTAAAATGATAGA----CAAATTTAACTTAACAATTCCTGGATTCCCATATGAAAAAAAAGTCAAATGTAT i canFam3.chr10 C 0 C 0 a score=102501.000000 s hg38.chr22_KI270876v1_alt 229186 31 + 263666 ---ATACActcagtttcttcacctgcaaaatgga s panTro4.chr22 34609152 31 + 49737984 ---ATACActcagtttcttcacctgcaaaatgga i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31029058 31 + 46535552 ---ACACActcagtttcttcatctgcaaaatgga i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100582549 31 - 115148730 ---ACACATtcagtttcttcatctgcaaaatgga i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80727609 31 + 95678458 ---ACACTctcagtttcttcatctgcaaaatgga i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81154149 31 - 96509753 ---ACACTctcagtttcttcatctgcaaaatgga i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76410311 31 + 90941950 ---Acactctcagtttcttcatctgcaaaatgga i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18678955 31 + 33263144 ---ACACTctcagtttctttatctgcaaaatgga i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198381968 31 + 210400635 ---ATACTctcagtttcttcatctgaaaaatggA i calJac3.chr1 C 0 M 436 s canFam3.chr10 40996441 32 - 69331447 ATATAACTctcactttcatcatctgtaaaatg-- i canFam3.chr10 C 0 C 0 e mm10.chr15 77211459 522 + 104043685 I a score=116450.000000 s hg38.chr22_KI270876v1_alt 229217 42 + 263666 gttaataatgcctacattacagggatgttgtcaaacccaaat s panTro4.chr22 34609183 42 + 49737984 gttaataatgcctacattacagggacgttgtcaaacccaaat i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31029089 42 + 46535552 gttaataatgcctatattacagggacgttgtcaaacccaaat i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100582580 42 - 115148730 gttaataatgcctacattacagggacgttgtcaaacccaaat i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80727640 42 + 95678458 gttaataatgcctacatcacagggacattgtcaaacccaaat i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81154180 42 - 96509753 gttaataatgcctgcatcacagggacattgtcaaacccaaat i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76410342 41 + 90941950 gttaATAATG-CTACATCACAGGGACATTGTCAAACCCAAAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18678986 42 + 33263144 gttaataatgcctacattacagggacactgtcaaacccaaat i chlSab2.chr19 C 0 C 0 s canFam3.chr10 40996473 37 - 69331447 -----tcatgcctacatcacagcaatactgtcagactcaaat i canFam3.chr10 C 0 I 15 e mm10.chr15 77211459 522 + 104043685 I e calJac3.chr1 198381999 436 + 210400635 M a score=345731.000000 s hg38.chr22_KI270876v1_alt 229259 141 + 263666 agagaAcaaatgttcttcaacttacaatgggattttgtccctataaactcatcataagttgaaaatat-agtaagtcaaaaatgcatttaacacacctaacctaccaaacatcatagcttagcctagcctatcttaaacatg s panTro4.chr22 34609225 141 + 49737984 agagaAcaaatgttcttcaacttacaatgggattttgtccctataaactcatcataagttgaaaatac-agtaagtcaaaaatgcatttaacacacctaacctaccaaacatcatagcttagcctagcctaccttaaacatg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31029131 142 + 46535552 agagaAcaaatgttcttcaacttacaatgggattttgtccctataaactcatcataagttgaaaatacaagtaagtcaaaaatgcatttaacacacctaacctaccaaacttcatagcttagcctagcctaccttaaacatg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100582622 141 - 115148730 agagaAcaaatgttcttcaacttacaatgggattttgtccctataaactcatcataagttgaaaatac-agtaagtcaaaaatgcatttaacacacctaacctaccaaacatcatagcttagcctagcctacactacacatg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80727682 140 + 95678458 agagaAcaaatgttcttcaacttacaatgggagtttgtccctataaactcatcgtaagttgaaaatac-agtaagtcaaaaatgca-ttaacacacctaacctaccaaacatcatagcttagcctagcctaccttaaacatg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81154222 140 - 96509753 agagaAcaaatgttcttcaacttacaatgggagtttgtccctataaactcatcgtaagttgaaaatac-agtaagtcaaaaatgca-ttaacacacctaacctaccaaacatcatagcttagcctagcctaccttaaacatg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76410383 140 + 90941950 AGAGAACAAATGTTCTTCAACTTACAATGGGAGTTTGTCCCTATAAACTCATCGTAAGTTGAAAATAc-agtaagtcaaaaatgca-ttaacacacctaacctaccaaacatcatagcttagcctagcctaccttaaacatg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18679028 140 + 33263144 agagaAcaaatgttcttcaacttacaatgggagtttgtccctataaactcatcgtaagttgaaaatac-agtaagtcaaaaatgca-ataacacacctaacctaccaaacatcatagcttagcctagcctaccttaaacatg i chlSab2.chr19 C 0 C 0 e mm10.chr15 77211459 522 + 104043685 I e canFam3.chr10 40996510 15 - 69331447 I e calJac3.chr1 198381999 436 + 210400635 M a score=779977.000000 s hg38.chr22_KI270876v1_alt 229400 254 + 263666 ctcagaacacttacattaggttacagttgggtaaaatcatttaacacaatgcctattttataat-aaagtgttgaatatctcatgtaatttactgaatattataataaaagtgaaaaaatgggtactcagatggtttctactgaatgaacattggtttctactgaatgtgtattgcttttgtaccattgtaaagtcagaaaactgttaagcagaaccattctaagttgtggaTGGTTCAACATCTG-TA---TGTTAGG s panTro4.chr22 34609366 257 + 49737984 ctcagaacacttacattaggttacagttgggtaaaatcatttaacacaatgcctattttataat-aaagtgttgaatatctcatgtaatttactgaatattataataaaagtgaaaaaatgggtactcagatggtttctactgaatgaacattggtttctactgaatgtgtattgcttttgtaccattgtaaagtcagaaaactgttaagtagaaccattctaagttgtggaTGGTTCAACATCTG-TATGTTGTTAGG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31029273 255 + 46535552 ctcagaacatttacattaggttacagttgggtaaaaacatttaatacaatgcctatttcataat-aaagtattgaatatctcatgtaatttactgaatattataataaaagtgaaaaaatgggtactcggacggtttctactgaatgaacattggtttctactgaatgtgtattgcttttgtaccattgtaaagtcagaaaactgttaagtagaaccattctaagttgtggaTGGTTCAACATCTGTTA---TGTTAAG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100582763 255 - 115148730 ctcagaacacttacattaggttacagttgggtaaaatcatttaacacaatgcctattttataataaaagtgttgaatatctcatgtaatttcctgaatattataataaaagtgaaaaaatgggtactcagacggtttctactgaatgaacattggtttctactgaatgcgtattgcttttgtaccattgtaaagtcagaaaactgttaagtagaaccattctaaattgtggaTGGTTCAACATCTG-TA---TGTTAAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80727822 254 + 95678458 ctcagaacacttacattaggttacagttgggtaaaatcatttaacacaatgcctattttataat-aaagtgttgaatatctcatgtaatttactgaatattgtaataaaagtgaaaaaatgggtactcggacggtttctactgaatgaacattggtttctattgaatgtgtactgcttttgtgccattgtaaagtcagaaaactgttaagtcgaaccattctaagttgtggaTAGTTCAACATCTG-TA---TGTTAAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81154362 254 - 96509753 ctcagaacacttacattaggttacagttgggtaaaatcatttaacacaatgcctattttataat-aaagtgttgaatatctcatgtaatttactgaatattgtaataaaagtgaaaaaatgggtactcggacggtttctactgaatgaacattggtttctattgaatgtgtactgcttttgtgccattgtaaagtcagaaaactgttaagtcgaaccattctaagttgtggaTAGTTCAACATCTG-TA---TGTTAAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76410523 254 + 90941950 ctcagaacacttacattaggtTACAGTTGGGTAAAATCATTTAACACaatgcctattttataat-aaagtgttgaatatctcatgtaatttactgaatattgtaataaaagtgaaaaaatgggTACTCGGACGGTTTCTACTGAATGAACATTGGTTTCTATTGAATGTGTACTGCTTTTGTGCCACTGTAAAGTCAGAAAACTGTTAAGTCGAACCATTCTAAGTTGTGGATAGTTCAACATCTG-TA---TGTTAAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18679168 254 + 33263144 ttcagaacacttacattaggttacagttgggtaaaatcatttaacacaatgcctattttataat-aaagtgttgaatatctcatgtaatttactgaatattgtaataaaagtgaaaaaatgggtactcggacggtttctactgaatgaacattggtttctattgaatgtgtattgcttttgtgccattgtaaagtcagaaaactgttaagtcaaaccattctaagttgtggaTAGTTCAACATCTG-TA---TGTTAAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198382437 246 + 210400635 ctcagaacacttatattaggttacagttgagcagaatcatttaatgcgatgcctat---------aaagtgttgaatatgtcatgtaatttactgaatattataacagaagtgaaaaaatggatgctcggacggtttctactgaatgaatattggtttctactgaatgtgtattgcttttctaccactgtaaagtcagaaaactgttaagtcaaaccattctaagttgtggaTAGTTCAACATCTA-TA---TGTTAAA i calJac3.chr1 M 436 C 0 e mm10.chr15 77211459 522 + 104043685 I e canFam3.chr10 40996510 15 - 69331447 I a score=267822.000000 s hg38.chr22_KI270876v1_alt 229654 82 + 263666 CTATTATGTAAACAGAGCAATATATACTATTGTTATCATTA-CAATTACCACCACAATAGCCAATTGGTAAATATGAGTCACA s panTro4.chr22 34609623 82 + 49737984 CTATTATGTAAACAGAGCAATATATACTATTGTTATCATTA-CAATTACCACCACAATAGCCAATTGGTAAATATGAGTCACA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31029528 82 + 46535552 CTATTATGTAAACAGAGCAATATATACTATCGTTATCATTA-CAATTACCACCACAATAACCAATTGGTAAATATGAGTCACA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100583018 82 - 115148730 CTATTATGTAAACAGAGCAATATATACTATCATTATCATTA-CAATTACCACCACAATAGCCAACTGGTAAATATGAGTCACA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80728076 82 + 95678458 CTATGATGTAAACAGACCATTATATACTATCGTTATCATTA-CAATTACCACCACAGTAGCCAACTGGTAAATATGAATCACA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81154616 82 - 96509753 CTATGATGTAAACAGACCATTATATACTATCGTTATCATTA-CAATTACCACCACAGTAGCCAACTGGTAAATATGAATCACA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76410777 82 + 90941950 CTATGATGTAAACAGAGCATTATATACTATCGTTATTATTA-CAATTACCACCACAGTAGCCAACTGGTAAATAtgaatcaca i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18679422 82 + 33263144 CTATGATGTAAACAGAGCATTATATACCATCGTTACCATTA-CAATTACCACCACAGTAGCCAACTGGTAAATATGAATCACA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198382683 81 + 210400635 CTATT-CGTAAACAGAGCATTATATACTATCATTATCATTA-CTATTACCACCACAATAGCCCACTGGTAAATATGAGTAGTA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40996525 82 - 69331447 CTAATCTGTAACTAGAGCATTATAC-CTATCATTACTATTGCCAATTACCGCTAAAACAGCAGATTGGTAAACGGGAGTTACA i canFam3.chr10 I 15 I 196 e mm10.chr15 77211459 522 + 104043685 I a score=337940.000000 s hg38.chr22_KI270876v1_alt 229736 100 + 263666 AAATAAAAAATACT-AGATGAAACCTATTAAAT-AG-------GCAGAAACTTAGGTTTGGGGCTCAAGGAATTCAGTGAACTTGCCAAGCCTCTTTCATCCAATTTCT s panTro4.chr22 34609705 100 + 49737984 AAATAAAAAATACT-AGATGAAAGCTATTAAAT-AG-------GCAGAAACTTAGGTTTGGGGCTCAAGGAATTCAGTGAACTTGCCAAGCCTCTTTCACCCAATTTCT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31029610 99 + 46535552 AAACAAAAAATACT-AGATGAAAGCTATTAAAT-AG-------GCAGAAACTTAGGTTTGGGGCTCAAGGAATTCAGTGAACTTGCCAAGCCTC-TTCACCCAATTTCT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100583100 100 - 115148730 AAACAAAAAGCACT-AGATGAAAGCTATTAAAT-AG-------GCAGAAAGTTAGGTTTGGGGCTCAAGGAATTCAGTGAACTTGCCAAGCCTCTTTCACTCAATTTCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80728158 100 + 95678458 AAACAAAAAATACT-AGATGAAAGCTATTAAAT-AG-------GCAGAAACTTGGGTTTGGGGCTCAAGGAATTCAGTGAACTTGCCAAGTCTCTTTCACCCAATTTCT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81154698 100 - 96509753 AAACAAAAAATACT-AGATGAAAGCTATTAAAT-AG-------GCAGAAACTTGGGTTTGGGGCTCAAGGAATTCAGTGAACTTGCCAAGTCTCTTTCACCCAATTTCT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76410859 100 + 90941950 aaacaaaaaatact-agaTGAAAGCTATTAAAT-AG-------GCAGAAACTTGGGTTTGGGGCTCAAGGAATTCAGTGAACTTGCCAAGTCTCTTTCACCCAATTTCT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18679504 101 + 33263144 AAACAAAAAATACTAAGATGAAAGCTATTAAAC-AG-------GCAGAAACTTGGGTTTGGGGCTCAAGGAATTCAGTGAACTTGCCAAGTCTCTTTCACCCAATTTCT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198382764 101 + 210400635 AAACAAAAAAGATT-GGATGAAAGCTATTACATAAG-------GTAGAAACTTGGGTTTGGGGCTCAAGGAATTGAGTAAACTTGTCAAGCCTCTTTCACCAAATTTCT i calJac3.chr1 C 0 I 1 s canFam3.chr10 40996803 101 - 69331447 aaataaa------t-aaataaaattttttaaaa-aGCAATTACACAGAAACTTGGATTTGGGGTCCAAGGAATCCCATGAACTTGTCACATCCCCTTCACCAACTTTCT i canFam3.chr10 I 196 C 0 e mm10.chr15 77211459 522 + 104043685 I a score=4870.000000 s hg38.chr22_KI270876v1_alt 229836 15 + 263666 CATCTA----------ttttttttt s panTro4.chr22 34609805 25 + 49737984 CATCTCACTAttttttttttttttt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31029709 20 + 46535552 CATCTCGCTAT-----Ctttttttt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100583200 23 - 115148730 CATCCTGCTATCtt--ttttttttt i nomLeu3.chr7b C 0 C 0 s canFam3.chr10 40996904 15 - 69331447 TATCTC----------TTCACCTTT i canFam3.chr10 C 0 I 6 e mm10.chr15 77211459 522 + 104043685 I e calJac3.chr1 198382865 1 + 210400635 I e rheMac3.chr10 80728258 0 + 95678458 C e papAnu2.chr10 76410959 0 + 90941950 C e macFas5.chr10 81154798 0 - 96509753 C e chlSab2.chr19 18679605 0 + 33263144 C a score=154966.000000 s hg38.chr22_KI270876v1_alt 229851 288 + 263666 tttttttgagatggagtctcgctctgtcacccaggctggagtgcagtggcatgatctcagctcactgcaacctccacctcccaggttcacaccattctcctgcctcagcctcccaagtagctgggactacaggcgcccgccaccacgcctggctaattttttgtatttttagtatagacagggtttcactgtgttagtcaggatggtctcgatctcctgacctcgtgatctgcccacctcggcctcccgaagtgctggaattacaggagtgagccactgcgcccagcA s panTro4.chr22 34609830 288 + 49737984 tttttttgagatggagtctcgctctgtcacccaggctggagtgcagtggcacgatctcagctcattgcaacctccacctcccaggtttacgccattctcctgcctcagcctcccaagtagctgggactacaggcgcccgccaccacgcctggctaattttttgtatttttagtagagacagggtttcactgtgttagtcaggatggtctcgatctcctgaccttgtgatctgcccacctcagcctcccgaagtgctggaattacaggagtgagccactgcgcccagcA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31029729 288 + 46535552 tttttttgagatggagtctcgctttgtcgcccaggctggagtgcagtggcacgatctcagctcactgcaacctccacctcccaggttcacgccattctcctgcctcagcctcccaagtagctgggactacaggcgcccgccaccacgcctgactaattttttgtatttttagtagagacagggtttcactgtgttagtcaggatggtctcgatctcctgacctcgtgatccgcccacctcggcctcccaaagtgctggaattacaggcataagccaccgcgcccagcA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100583223 288 - 115148730 tttttttgagatggagtctcgctctgtcgcccaggctggagtgcagtggcacgatctcagctcactgcaacctccacctcccaggttcatgccattctcctgcctcagcctcccaagcagctgggactacaggcgcccaccaccatgcctggctaattttttgtatttttagtagagacagagtttcactgtgttagtcaggatagtctcgatctcctgaccttgtgatccacccgccttggcctcccaaagtgctggaattacaggcgtgagccaccgcgcccagcA i nomLeu3.chr7b C 0 C 0 e mm10.chr15 77211459 522 + 104043685 I e canFam3.chr10 40996919 6 - 69331447 I e calJac3.chr1 198382865 1 + 210400635 I e rheMac3.chr10 80728258 0 + 95678458 C e papAnu2.chr10 76410959 0 + 90941950 C e macFas5.chr10 81154798 0 - 96509753 C e chlSab2.chr19 18679605 0 + 33263144 C a score=2800.000000 s hg38.chr22_KI270876v1_alt 230139 1 + 263666 C s panTro4.chr22 34610118 1 + 49737984 C i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31030017 1 + 46535552 C i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100583511 1 - 115148730 C i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80728258 1 + 95678458 C i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81154798 1 - 96509753 C i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76410959 1 + 90941950 C i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18679605 1 + 33263144 C i chlSab2.chr19 C 0 C 0 e mm10.chr15 77211459 522 + 104043685 I e canFam3.chr10 40996919 6 - 69331447 I e calJac3.chr1 198382865 1 + 210400635 I a score=506214.000000 s hg38.chr22_KI270876v1_alt 230140 175 + 263666 ATCTCGCTATCTTTCAGAAAATCATTGTTATCAGGTTTggtgca---gtggctcatgcttcttgttgcagctgctcaagaggccaaggtgagaggatcgcttggggccaggaatttgagaccagcctaagccacatagcaaaacccagtctcttaaaCATATATATATG-AAAAAATAT s panTro4.chr22 34610119 174 + 49737984 ATCTTGCTATCTTTCAGAAAATCATTG-TATCAGGTTTggtgca---gtggctcatgcttcttgttgcagctgctcaagaggccaaggtgagaggatcgcttggggccaggaatttgagaccagcctaagccacatagcaaaacccagtctcttaaaCATATATATATG-AAAAAATAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31030018 174 + 46535552 ATCTCGCTATCTTTCAGAAAATCATTG-TATCAGGTTTggtgca---gtggctcatgcttctagttgcagctgctcaagaggccaaggggagaggatcgcttggggccaggaatttgagaccagcctaagccacagagcaaaatccagtctcttaaaCACAGATATATG-AAAAAATAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100583512 174 - 115148730 ATCTCACTATCTTTCAGAAAATCATTG-TATCAGGTTTggtgca---gtggctcatgcttctagttgcagctgctcaagaggccaaggtgagaggatcacatggggccaggaatttgagaccagcctaagccacatagcaaaacccagtctcttaaaCATATATATATG-AAAAAATAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80728259 176 + 95678458 ATCTCACTATCTTTCAGAAAATCATTG-CATCAGGTTTGGTGCAgtggtggctcatgcttctagttgaagctgctcaagaggccaaggtgagaggatcgcttggggccaagaatctgagaccaggctaagccacatagcaaaacccagtctcttaaaCAT--ATATATGAAAAAAATAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81154799 175 - 96509753 ATCTCACTATCTTTCAGAAAATCATTG-CATCAGGTTTGGTGCAgtggtggctcatgcttctagttgaagctgctcaagaggccaaggtgagaggatcgcttggggccaagaatctgagaccaggctaagccacatagcaaaacccagtctcttaaaCAT--ATATATG-AAAAAATAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76410960 175 + 90941950 ATCTCACTATCTTTCAGAAAATCATTG-CATCAGGTTTGgtgcagtggtggctcatgcttctagTTGAAGCTGCTCaagaggccaaagtgagaggatcgcttggggCCAAGAATCTGAGACCAGGCTAAGCCAcatagcaaaacccagtctcttaaacat--atatatg-aaaaaatat i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18679606 175 + 33263144 ATCTCACTATCTTTCAGAAAATCATTG-CATCAGGTTTGGTGCAATggtggctcatgcttctagttgaagctgctcaagaggccaaggtgagaggatcgcttggggccaagaatctgagatcaggctaagccacatagcaaaacccagtctcttaaaCAT--ATATATG-AAAAAATAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198382866 172 + 210400635 ATCTTGCTGTCTTTCAGAAAATCATTA-TATCAGgcttggtgca---gtggctcatgcttctagttgcagctacttaagaggccaa---gagagcatcacttgggaccaggagtttgagactagactaagcaacacagcaaaacccagtctcttaaaCataaatatatataaaaaatat i calJac3.chr1 I 1 C 0 e mm10.chr15 77211459 522 + 104043685 I e canFam3.chr10 40996919 6 - 69331447 I a score=182680.000000 s hg38.chr22_KI270876v1_alt 230315 54 + 263666 ACATTACATCAGGAATTTCAGTTTCCTTCTTTAAAGTATGGGTGGAAAGAAGGG- s panTro4.chr22 34610293 54 + 49737984 ACATTACATCAGGAATTTCCGTTTCCTTCTTTAAAGTATGGGCGGAAAAAAGGG- i panTro4.chr22 C 0 M 490 s ponAbe2.chr22 31030192 54 + 46535552 ACATTACATCAGGAATTTCAGTTTCCTTCTTTAAAGTATGGGGGGAAAGAAGGG- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100583686 52 - 115148730 ACATTACATCAGGAATTT--GTTTCCTTCTTTAAAGTATGGGGGGAAAGAAGGG- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80728435 53 + 95678458 ACATTACATCAGGAATTTCAGTTTCCTTCTTTAAAGTATGGGGGG-AAGAAGGG- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81154974 53 - 96509753 ACATTACATCAGGAATTTCAGTTTCCTTCTTTAAAGTATGGGGGG-AAGAAGGG- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76411135 53 + 90941950 acattacatcaggaatttcagtttccttctttaaAGTATGGGGGG-AAGAAGGG- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18679781 54 + 33263144 ACATTACATCAGGAATTTCAGTTTCCTTCTTTAAAGTATGGGGGGAAAGAAGGG- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198383038 53 + 210400635 aaattaCATCAGGAATTTCAGTTTCCTTCTTTAAAGTATGGGGGA-AAGAAGGG- i calJac3.chr1 C 0 C 0 s canFam3.chr10 40996925 54 - 69331447 ACACTGTATCTGGAACTTCAGTTTCCTTTTCTAAAGTACTGGGGG-AGAAAGGGC i canFam3.chr10 I 6 C 0 e mm10.chr15 77211459 522 + 104043685 I a score=461062.000000 s hg38.chr22_KI270876v1_alt 230369 182 + 263666 AGTTGAGAGGTTGTAAGGGGAGAAAAAGAACAACAGCAGTAAAAGGCTTAAAGTAATTAGGAAGTCAGATACACCTGAAATATGTAACCCTGTTTTAGCATTTTACAAGTTGTCAAAAGGTAATACAACAATTTTAAAAGTAACGCTAGCAATATTTTTCTTCATTCAAAAGAAAAATACTA s ponAbe2.chr22 31030246 182 + 46535552 AGTTGAGAGGTTGTAAGGGGAGAAAAAGAACAACAGCAGTAAAAGGCTTAAAGTAATTAGGAAGTCAGATACACTTGAAATACGTAACCCTGTTTTAGCATTTTACAAGTTGTCAGAAGGTAATACAACAATTTTAAAAGTAATGCTAGCAATATTTTTCTTCATTCAAAAGAAAACTACTA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100583738 182 - 115148730 AGTTGAGAGGTTGTAAGGGGAGAAAAAGAACAACAGCAGTAAAAGGCTTAAAGTAATTAGGAAGTCAGATACACTTGAAATCCGTAACCCTGTTTTAGCATTTTACAAGTTGTCAAAAGGTAATACAACAATTTTAAAAGTAATGCTATCAATATTTTTCTTCATTCAAAAGAAAAATACTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80728488 182 + 95678458 AATTGACAGGTTGTAAGGGGAGAAAAAGAAAAACAGCAGTAAAAGGTTTAAAGTAATTAGGAAGTCAGATACACTTGAAATATATAACCCTGTTTTGGCATTTTACAAGGTTTCAAAAGGTAGTACAACAATTTTAAAAGTAATGCTGGCAATATTTTTCTTCATTCAAAAGAAAAATACTA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81155027 182 - 96509753 AATTGACAGGTTGTAAGGGGAGAAAAAGAAAAACAGCAGTAAAAGGTTTAAAGTAATTAGGAAGTCAGATACACTTGAAATATATAACCCTGTTTTGGCATTTTACAAGGTTTCAAAAGGTAGTACAACAATTTTAAAAGTAATGCTGGCAATATTTTTCTTCATTCAAAAGAAAAATACTA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76411188 182 + 90941950 AATTGACAGGTTgtaaggggagaaaaagaaaaacagcagtaAAAGGTTTAAAGTAATTAGGAAGTCAGATACACTTGAAATCTATAACCCTGTTCTGGCATTTTACAAGGTTTCAAAAGGTAgtacaacaattttaaaagtaatgctggcaatatttttcttcattcaaaagaaaaatgcta i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18679835 182 + 33263144 AATTGAGAGGTTGTAAGGGGAGAAAAAGAAAAACAGCAGTAAAAGGTTTAAAGTAATTAGGAAGTCAGATACACTTGAAATATATAACCCTGTTTTGGCATTTTACAAGGTTTCAAAAGGTAGTACAACAATTTTAAAAGTAATGCTGGCAATATTTTTCTTCATTCAAAAGAAAAATACTA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198383091 179 + 210400635 AGTTGAGAGGTTGTAAGGGGAGAAAAAGAACAACAGTTGTAAAAGGCTTCAAGTAATTAGGAAGCCAGATACATATAAAATACATAGCCCTGTTCTAGAATTTTACAGGTTGTCAAAAAGTAGT---ACAAGTTTAAAAGTACTACTAGCAATATTTTTCTTCATTGAAAAGAAAAATACTA i calJac3.chr1 C 0 C 0 s canFam3.chr10 40996979 147 - 69331447 AGTT-AGTGGTTGTAAGGGGAGAAAAAGAGGTACAGTGGTACAAGGTTTACAGCAGTTAGGGAACATGACACATCTGAAGTACATAACCCTGTTTTAGCACTTCATCAATTGTAAGGAAGTAGTCCAGCAATTTTTAGACAGATGCTA---------------------------------- i canFam3.chr10 C 0 I 126 e mm10.chr15 77211459 522 + 104043685 I e panTro4.chr22 34610347 490 + 49737984 M a score=239763.000000 s hg38.chr22_KI270876v1_alt 230551 105 + 263666 AATACAAATATAGTTTCTACTTAGTATGCAACAATCTATCATGAAAAGTGCAATGTCTCCGAGCAATGTCTTCGAGAAATAAGGGTAACATGTGAGTCCCCCTgt s ponAbe2.chr22 31030428 105 + 46535552 AATACAAATATAGTTTCCACTTAGTATGCAACAATCTATCATGAAAAGTGCGATGTCTCCGAGCAATGTCTTCGAGAAATAAGGGTAACATGTGAGTCCCCCTgt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100583920 105 - 115148730 AATACAAATATAGTTTCTACTTAGTATGCAACAATCTATCATTAAAAGTGCAATGTCTCTGAGCAATGTATTCGAGAAATAAGGGTAACATGTGAGTCCTCCTgt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80728670 105 + 95678458 AATACAAATATAGTTTCTACTTAGTATGCAACAATCTATCATGAAAAGTGCAATGTCTCTGAGCAATGTCTTCTAGAAATAAGGATAACATGGGAGTTCCCCTgt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81155209 105 - 96509753 AATACAAATATAGTTTCTACTTAGTATGCAACAATCTATCATGAAAAGTGCAATGTCTCTGAGCAATGTCTTCTAGAAATAAGGATAACATGGGAGTTCCCCTgt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76411370 105 + 90941950 aataCAAATATAGTTTCTACTTAGTATGCAACAATCTATCATGAAAAGTGCAATGTCTCTGAGCAATGTCTTCTAGAAATAAGGATAACATGGGAGTTCCcctgt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18680017 105 + 33263144 AATACAAATATAGTTTCTACTTAGTATGCAACAATCTATCATGAAAAGTGCAATGTCTCTGAGCAATGTCTTCTAGAAATAAGGATAACATGGGAGTTCCCCTgt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198383270 92 + 210400635 AATACAAATATAGTTTCTACTTAGTATGCAACAATCTATCATTAAAA-------------GGACAATGTCATCCAGAAATAAGGATAACGTGTGAGTCCCCCTgt i calJac3.chr1 C 0 C 0 e mm10.chr15 77211459 522 + 104043685 I e canFam3.chr10 40997126 126 - 69331447 I e panTro4.chr22 34610347 490 + 49737984 M a score=671870.000000 s hg38.chr22_KI270876v1_alt 230656 231 + 263666 tggagcgaagtggcacaatctcggctcactgcaacctccgcttcccggattc-aagcgattctcctgcctcagcctcctgggtagctgggattacaggcacaagccaccatgcccggttaatgtttttgtatttttagtagagacaggtttcgccatgttggccaggttggtctccaactcctgaccttaggtgatccacccacctcggcctcccaaagtgctgggattata s panTro4.chr22 34610837 231 + 49737984 tggagtgcagtggcacaatctcggctcactgcaacctccgcctcctggattc-aagcgattctcctgcttcagcctcctgggtagctgggattacaggcacaagccaccatgcccggttaatgtttttgtatttttagtagagacaggtttcgccatgttggccaggttggtttccaactcctgaccttaggtgatccacccacctcggcctcccaaaatgctgggattata i panTro4.chr22 M 490 C 0 s ponAbe2.chr22 31030533 231 + 46535552 tggagcacagtggcttgatcttggctcactgcaacctccgcctcctggattc-aagtgattctcctgcctcagcctcctgggtagctgggattacaggcacaagccaccatacccggttaatgtttttgtatttttagtagagacaggtttcgccatgttggccaggctggtctccaactcctgaccttaggtgatccacccaccttggcctcccaaagtgctgggattata i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100584025 231 - 115148730 tggagcgcagtggcacaatctcagctcgctgcaacctccgcctcacggattc-aagcgattctcctgcctcagcctcctgggtagccgggattacaggcacaagccaccatacccggttaatgtttttgtatttttagtagagacaggtttcgccatgttggccaggctggtctccaactcctgaccttaggtgatccacccacctcggcctcccaaagtgctgggattaca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80728775 231 + 95678458 tggagtgcagtggcacaatcttgcctcaccgcagcctctgcctcccagattc-aagcaattctcctgcttcagcctcctgggtagctgggattacaggcacaagccaacatacctggctcatttttttgtatttttaatagagacgggttttgccatgttggccaggctagtctcgaactcctgactttaggtgatccacccacctcggcctcccaaagtgctgggattaca i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81155314 231 - 96509753 tggagtacagtggcacaatcttgcctcaccgcaacctctgcctcccagattc-aagcaattctcctgcttcagcctcctgggtagctgggattacaggcacaagccaacatacctggctaatttttttgtatttttaatagagacgggttttgccatgttggccaggctagtctcgaactcctgactttaggtgatccacccacctcggcctcccaaagtgctgggattaca i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76411475 231 + 90941950 tggagtgcagtggcacaatctcagctcaccgcaacctctgcctcccagattc-aagcaattcttctgcttcagcctcctgggtagctgggattacaggcacaagccaacacacctggctaatttttttgtatttttaatagagacgggttttgccatgttggccaggctagtctcgaactcctgactttaggtgatccacccacctcggcctcccaaagtgctgggattata i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18680122 219 + 33263144 tggagtgcagtggcacaatctcggctcaccgcaacctctgcctcccagattc-aagcaattctcctgcttcagcctcctgggtagctgggattacaggcacaagccaacatacctggctaatttttttgtatttttaatagagacgggttttgccatgttggccaggctagtctcgaactcctga------------cacccacctcggcctcccaaagtgctgggattata i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198383362 231 + 210400635 tggagtgcaatggcacaatctcagctcactgcaacctctgcctcccggattctaagcgattctcctgcctcagcctcccgagtagctgggattaaaggcacatgcca-caaatctggctattttttttgtatttttagtagagacaggttttcccatgttggccagactggtctcaaactcctgacctcaggtgatctgcccaccttggcctcccaaagtgttagaattata i calJac3.chr1 C 0 C 0 e mm10.chr15 77211459 522 + 104043685 I e canFam3.chr10 40997126 126 - 69331447 I a score=246380.000000 s hg38.chr22_KI270876v1_alt 230887 87 + 263666 ggcgtgagccactgtgccgggccTTACTTTCTTTTTTAGGCAGAAAAAGAAGATAATTTTTAACCTG-TACCCAAAGGCATAGACAAT s panTro4.chr22 34611068 87 + 49737984 ggcgtgaaccactgtgccaggccTTACTTTCTTTTTTAGGCAGAAAAAGAAGATAATTTTTAATCTG-TACCCAAAGGCACAGACGAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31030764 88 + 46535552 ggcgtgagccactgtgcccagccTTACTTTCTTTTTTAGGCAGAAAAAGAAGATAATTTTTAACCTGTTACCCAAAGGCATAGACAAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100584256 86 - 115148730 ggcgtgagccactgtgcccagcTTTACTTTC-TTTTTAGGCAGAAAAAGAAGACAATTTTTAACCTG-TACCCAAAGGCATAGACAAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80729006 86 + 95678458 ggcgttagccactgtgccaggccTTACTTTC-TTTTTAAGCAGAAAAAGAAGATGATTTTTAACCTG-TATCCAAAGGCATAGACAAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81155545 86 - 96509753 ggcgttagccactgtgccaggccTTACTTTC-TTTTTAAGCAGAAAAAGAAGATGATTTTTAACCTG-TATCCAAAGGCATAGACAAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76411706 86 + 90941950 ggcgttagccactgtgccaggccttactttc-tttttaagcagaaaaagaaGATGATTTTTAACCTG-TATCCAAAGGCACAGACAAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18680341 86 + 33263144 ggcgttagccactgtgccaggccTTACTTTC-TTTTTAAGCAGAAAAAGAAGATGATTTTTAACCTG-TAGCCAAAGGCATAGACAAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198383593 86 + 210400635 ggggtgagccaccatgcccagccTTACTTTC-TTTTTAGGCCGAAAAGGAAGATAATTTTTAACCTG-TACATAAAGGCATAAACAAT i calJac3.chr1 C 0 C 0 s canFam3.chr10 40997252 59 - 69331447 GGCGAGATCCCCTG----------------------------GTACAAAAAAACTTTTTGTAAACTG-TGCATTCAGGTGCAGGCAGT i canFam3.chr10 I 126 C 0 e mm10.chr15 77211459 522 + 104043685 I a score=6017721.000000 s hg38.chr22_KI270876v1_alt 230974 1707 + 263666 ACAAATGTAATCTATTTTGATGATTGAC-AATCATAAATATTTACTTAATTTCAACAAAGTCATGATTTTTTGCTCTTTAAACAAAATATAACTGAATCTCTTTAAC---TTTTATA---Ctt-aaaatgatttaacttctccaaaatgt---ttaaagtttg-aaaaaaagccaatgaagtcacttcctgaagccattaattcatctttttaacactacttctggtgact---ttaat----ccacacacacattgtacgtgagtcatactgatgctgtgttattcaattcattatattttgaaaagtactctatggtcaaattaactttgagaaaCACGGTTTAAGCAATTTTATTGTTTGCCCAATTTGA-ATTTTCGCAGGCTTCTAACAGGATACTTAAATTAATAGATGC---------------TTTTTTACAAATTTCACATATACTCATAGGAAGAAAACAAGCTATCCAGGGGTGTCAGAGA-TAGGTAGCTGACAGGCA---GACAGATGCCAAGAATTTGCTCCACAATT-----------------------------TAAAGGGCTACAATCAGGATAACAGAAGTGTGAGAAACAGACTCA-GACAGCTTAAGGGTTTTTGTTGCCCAGAAGGAATACCAATGGAAGGGATACCATTGTCCATTTCTATACCTTTCTGTTCTGAATAGCCATATCCAAGCAGCTTTAC--TG----TGTGAGATTCCTGGAGAATTAGAAGTACTCCCACTTCCCTAGATGATTCATTTG--TAATGCCAACTTATGTGTCTGAATGCATGCAAAGGAGGTTGAGGGTCTTCTGAACTAGC-GGAAAAAA-------ACTGAAATAACATTATTTTCTGAGAAGGTAATCTATTTTAATCCATACAAATCCATTTGGGCTTTACCATTCTATCCCATATATAA---GCAATGGCTGCAGCATCAAAATGTTCCTTAAAA-TTAGTACATGCCAAACTCTATAAACTTATTTTCAGGCTATGACTTTACTTTTAATAACATAAATGAGTTCAGTGGGACTTATTTTAATTATTTCTG--AA-ACGGTTTA-TTTTTAGTAAATATAATAGTC----------CCCCACATGGAAAGCTAT-AACCATGACAAAAATTTTCTAGGAGGAGATAAAACCCTATTTATAGACCTATCAGTTGCTCCTTGCTTAGGTTGTAACATAGTTTCCACTTTAAGCCTGATATGACCTCCCGGGACTTCTCTGGTCTCTAATAATGTCCCTTTCATCCTGAAGTTTCCCACATTTATCTTTATCTCCCCCAGGTACTTAAGTTAAGCTACTATGGGTTGGGGGAAGGGAGAAGGAAAGAATCTTCTTTGTAAAAGCCATCTCCTACAGAAGAGTTTTAGGTAATTTTCAGGAACTTAAAA--AATGAAAGAT---AGTTCTTCACTTGGTGGGCTTTTTTG---GGAGAGAACCTCATAAATATTCAACAATCATCAGGAATACTGCTACAC-AGTAATCAATGCATATGGGAAATGGAAATGGCAACAAGGCCTACTGGTGTCTT-AATCGACCTCTGA-TTTATCTTAAAGTTTTGCATCTTTTAAAAATCCAACAAGA--GTAAAGGTA-----TTTTAA-----------------------TATACAGGATACCACATTCTCTAATCAGAGGAAAGCTAATCAAGGGAGCCAAAATATAAATAAATGTAAG-AAAT----------TTTTCCTAAAAATTGTGATCTCAGGGATTAAGTTGTTATTATTGGTGTTGTTTACATTAGCTGCTGGTATCGTTACACTCCTCACTTAAAATGCTAA s panTro4.chr22 34611155 1703 + 49737984 ACAAATGTAATCTATTTTGATGATTGAT-AATCATAAATATTTACTTAATTTCAACAAAGTCATGATTTTTTGCTCTTTAAACAAAATATAACTGAATCTCTTTAAC---TTTTATA---Ctt-aaaatgatttaacttctccaaaatgtg-tttaaagtttg-aaaaaaagctaatgaaatcacttcctgaagccattaattcatctttttaacactacttctggtgact---ttaat----ccacacacacattgtacatgagtcatactgatgctgtgttattcaattcattatattttgaaaagtactctatggtcaaattaactttgagaaaCACGGTTTAAGCAATTTTATTGTTTGCCCAATTTGA-ATTTTCACAGGCTTCTAACAGGATACTTAAATTAATAGATGC---------------TTTTTTACAAATTTCACATATACTCATAGGAAGAAAACAAGCTATCCAGGGGTGTCAGAGA-TAGTTAGCTGACAGGCA---GACAGATGCCAAGAATTTGCTCCACAATT-----------------------------TAAAGGGCTACAATCAGGATAACAGAAGTGTGAGAAACAGACTCA-GACAGCTTAAGGGTTTTTGTTCCCCAGAAGGAATACCAATGGAAGGGATACCATTGTCCATTTCTATACCTTTCTGTTCTGAATAGCCATATCCAAGCAGCTTTAC--TG----TGTGAGATTCCTGGAGAATTAGAAGTACT------TCCCTAGATGATTCACTTG--TAATGCCAACTTAGGTGTCTGAATGCATGCAAAGGAGGTTGAGGGTCTTCTGAACTAGT-GGAAAAAA-------ACTGAAATAACATTATTTTCTGAGAAGGTAATCTATTTTAATCCATACAAATCCATTTGGGCTTTACCATTCTATCCCATATCTAA---GCAATGGCTGCAGCATCAAAATGTTCCTTAAAA-TTAGTACATGCCAAACTCTATAAACTTATTTTCAGGCTATGACTTTACTTTTAATAACATAAATGAGTTCAGTGGGACTTATTTTAATTATTTCTG--AA-ACGGTTTA-TTTTTAGTAAATATAATAGTC----------CCCCACATGGAAAGCTAT-AACCATGCCAAAAATTTTCTAGGAGGAGATAAAACCCTATTTATAGACCTATCAGTTGCTCCTTGCTTAGGTTGTAACATAGTTTCCACTTTAAGCCTGATATGACCTCCCGGGACTTCTCTGGTCTCTAATAATGTCCCTTTCATCCTGAAGTTTCCCACATTTATCTTTATCTCCGCCAGGTACTTAAGTTAAGCTACTATGGGTTGGGGGAAGGGAGAAGGAAAGAATCTCCTTTGTAAAAGCCATCTCCTACAGAAGAGTTTTAGGTAATTTTCAGGAACTTAAAA--AATGAAAGAT---AGTTCTTCACTTGGTGGGCTTTTTTG---GGAGAGAACCTCATAAATATTCAACAATCATCAGGAATACTGCTACAC-AGTAATCAATGCATATGGGAAATGGAAATGGCAACAAGGCCTACTGGTGTCTT-AATCGACCTCTGA-TTTATCTTAAAGTTTTGCATCTTTTAAAAATCCAACAAGA--GTAAAGGTA-----TTTTAA-----------------------TATACAGGATACCACATTCTCTAATCAGAGGAAAGCTAATCAAGGGAGCCAAAATACAAATAAATGTAAG-AAAT----------TTTTCCTAAAAATTGTGATCTCAGGGATTAAGTTGTTATTATTGGTGTTGTTTACATTAGCTGCTGGTATCGTTACACTCCTCACTTAAAATGCTAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31030852 1682 + 46535552 ATAAATGTAATCTAT------------------------------TTAATTTCAACAAAGTCATGATTTTTTGCTCTTTAAACAAAATATAACTGAATCTCTTTAAC---TTTTATA---Ctt-aaaatgatttaacttctccaaaatgtg-tttaaagtttg-aaaaaaagccaatgaagtcacttcctgaagccattaattcatctttttaacactacttctggtgact---ttaat----ccacacacacattgtacatgagtcatactggtgctgtgttattcaattcactatattttgaaaagtactctatggtcaaattaactttgagaaaCACGGTTTAAGCAATTTTATTGTTTGCCCAATTTGA-ATTTTCGCAGGCTTCTAACAGGATACTTAAATTAATAGATGC---------------TTTTTTACAAATTTCACATATACTCATAGGAAGAAAACAAGCTATCCAGGGGTGTCAGAGA-TAGCTAGCTGACAGGCA---GACAGATGCCAAGAATTTGCTCCACAATT-----------------------------TAAAGGGCTACAATCAGGATAACAGAAGTGTGAGAAACAGACTCA-GACAGCTTAAGGGTTTTTGTTTCCCAGAAGGAATACCAATGGAAGGCATATCATTGTCCATTTCCATACCTTTCTGTTCTGAATAGCCATATCCAAGCAGCTTTACTGTG----TGTGAGATTCCTGGAGAATCAGAACTACTCCCACTTCCCTAGATGATTCACTTG--TAATGCCAACTTATGTGTCTGAAGGCATGCAAAGGAGGTTGAGGGTCTTCTGAACTAGT-GGAAGAAA-------ACTGAAATAACATTATTTTCTGAGAAGGTAATCTATTTTAATCCACACAAATCCA-TTGGGCTTTACCATTCTATCCCATATCTAA---GCAATGGCTGCAGCATCAAAATGCTCCTAAAAA-TTAGTACATGCCAAACTCTATAAACTTATTTTCAGGCTATGACTTTACTTTTAATAACACAAATGAGTTCAGTGGGACTTACTTTAATTATTTCTG--AA-ATGGTTTA-TTTTTAGTAAATATAATAGTC----------CCCCACATGGAAAGCTAT-AACCACGCCAAAAATTTTCTAGGAGGAGATAAAACCCTATTTATAGACCTATCAGTTGCTCCTTGCTTAGGTTGTAACATAGTTTCCACTTTAAGCCTGATATGACCTCCCGGGACTTCTCTGGTCTCTAATAATGTCCCTTTCATCCTGAAGTTTCCCACATTTATCTTTATCTCCGCCGGGTACTTAAGTTAAGCTACTATGGGTTGGGGGAAGGGAGAAGGAAAGAATCTCCTTTGTAAAAGTCATCTCCTACAGAAGAGTTTTAGGTAATTTTCAGGAACTTAAAA--AATGAAAGAC---AGTTCTTCACTTGGTGGGCTTTTTTG---GGAGAGAACCTCATAAATATTCAACAATCATCAGGAATACTGCTACAC-AGTAATCAATGCATATGGGAAATGGAAATGGCAACAAGGCCTACTAGGGTCTT-AATCGACCTCTGA-TTTATCTTAAAGTTTTGCATCTTTTAAAAATCCAACAAGA--GTAAAGGTA-----TTTTAA-----------------------TATACAGGATACTACATTCTCTAACCAAAGGAAAGCTAATCAAGGGAGCCAAAATATAAATAAATGTAAGAAAAT----------TTTTCCTAAAAATTGTGATCTCAGGGATTAAGTTGTTATTATTGGTGTTGTTTACATTAGCTGCTGGTATCTTTACACTCCTCACTTAAAATGCTAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100584342 1693 - 115148730 ACAAATGTAATCTATTTTAATGATTGAT-AATCATAAATATTTACTTAATTTCAACAAAGTCATGATTTTTTGCTCTTTAAACAAAATATAGCTGAATCTCTTTAAC---TTTTATA---Ctt-aaaatgatttaacttcttcaaaatgtg-tttaaagtttg-aaaaaaagccaatgaagtcacttcttgaagccattaattcatctttttaacactacttctggtgact---ttaat----ccacacacacattgtacatgagtcatactggtgctgtgttattcaattcattatattttgaaaagtactctgtggtcaaattaactttgagaaaCACGCTTTAAGCAATTTTATTGTTTGCCCAATTTGA-ATTTTCACAGGCTTCTAACAGGATACTTAAATTAATAGATTT---------------TTTTTTACAAATTTCACATATACTCATAGGAAGAAAACAAGCTATCCAGGGGTGCCAGAGA-TAGCTAGCTGACAGGCA---GACAGATGCCAAGAATTTGCTCCACAATT-----------------------------TAAAGGGCTACAATCAGGATAACAGAAGTGTGAGAAACAGACTCA-GACAGCTTAAGGGTTTTTGTTTCCCAGAAGGAATACCAATGGAAGGGATACCATTGCCCATTTCTATACTTTTCTGTTCTGAATAGCCATATCCAAGCAGCTTTAC--TG----TGTGAGATTCCTGGAGAGTTAGAACTACTCCCACTTCCCTAGATGATTCCCTTG--AAATGCCAACTTATGTGTCTGAATGCATGCAAAGGAGGTTGAGGGTCTTCTGAACTAGC-AGAAAAAA-------ACTGAAATAATATTATTTTCTGAGAAGGTAATCTATTTTAATCCATATCAATCCA-TTGGGCTTTACCATTCTATCCCATATCTAA---GCAATCGC-----------AATGTTCCTAAACATTTTGTACATGCCAAACTCTATAAACTTATTTTCAGGCTATGACTTTACTTTTAATAACATAAATGAGTTCAGTGGGACTTATTTTAATTATTTCTG--AA-ACGGTTTA-TTTTTAGTAAATATAATAGTC----------CCCCACATGGAAAGCTAT-AACCATGCCAAAAATGTTCTAGGAGAAGATAAAACCCTATTTATAGACCTATCAGTTGCTCCTTGCTTAGGTTGTAACATAGTTTCCACTTTAAGCCTGATATGACCTCCCGGGACTTCTCTGGTCTCTAAT-ATGTCCCTTTCATCCTGAAGTTTCCCACATTTATCTTTGTCTCCCCCGAGTACTTGAGTTAAGCTACTATGGGTTGGGGGAAGGGAGAAGGAAAGAATCTCCTTTGTAAAAGCCATCTCCTACAGAAGAGTTTTAGGTAATTTTCAGGAACTTAAAA--AATGAA-------AGTTCTTCACTTGGTGGGTTTTTTTG---GGAGAGAACCTCATAAATATTCAACAATCATCAGGAATACTGCTACAC-AGTAATCAATGCATATAGGAAATGGAAATGGCAACAAGGCCTACTGGTGTCTT-AATCGACCTCTGA-TTTATCCTGAAGTTTTGCATCCTTTAAAAATCCAACAAGA--GTAAAAGTA-----TTTTAA-----------------------TATACAGGATACTACATTCTCTAATCAAAGGAAAGCTAATCACGGAAGCTAAAATATAAATAAATGTAAG-AAAT----------TCTTCCTAAAATTTGTGATCTCAGGGATTAAGTTGTTATTATTGGTGTTGTTTACATTAGCTGCTGGTATCTTTACACTCCTCACTTAAAATGCTAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80729092 1687 + 95678458 ACAAATGTAATCTATTTTGATGACTGAT-AATCA------------TAATTTCAACAAAGTCATGATTTTTTGCTCGTTAAACAAACTATAACTGAATCTCTTTAAC---TTTTGTA---Ctt-aaaatgatttaacttctcc-aaatgtg-tttaaagtttg-aaaaaaagccaatgaagtcacttcttaaagccattaattcatcttttt-acactacttctggtgact---ttaat----ccacacacacattgtacatgagtcatactggtgctgtgtggttcaattcattatattttgaaaagtactctatggtcaaattaactttgagaaaCACGCTTCAAGCAATTTTACTGTTTGCCCAATTTGA-ATTTTCGTAAACTGCAAACAGGATATGTAAATTAATAGATGC---------------TTTTTTACAAATTTCACATATACTCATAGGAAGAAAACAAGCTATCCAGGGGTGTCAGAGATTAGCTAGCTGACAGGCA---GACAGATGCCAAGAATTTGCTCCACAATT-----------------------------TAAAGGGCTACAATCAGGATAACAGAAGTGTGAGAAACAGACTCA-GACAGCTTAAGGGTTTTTGTTTCCCAGAAGGAATACCAGTGGAAGGGATACCACTGCCCATTTCTATATCTTTCTGTTCTGAACAGCCATATCCAAGCAGCTTTAC--TG----TGTGAGATTCCTGGAGAATTAGAACTACTGCCACTTCCCTCGATGATTCACTTG--TAATGCCAACTTATGAGTCTGAATGCACACAAAGGAGGTTGAGGGACTTCTGAACTAGCAGGAAAGAA-------GTTGAAATAACATTATTTTCTGAGAAGGTAATCTATTTTAATCCAAACAAATCCA-CTGGGCTAGACCATTCTATCCCACATCTAA---GCAATGGCTGCAATATCAAAATGTTCCTAAAAA-TTAGTACATGCCAAACTCTATAAACTTATTTTCAGGCTGTGACTTTACTTTTAATAACATAAATGAGTTCAGTGGGACTTATTTTAATTCTTTTTG--AA-ACGGTTTA-TTTTTAGTAAATATAATAGTC----------CCCCACATGGAAAGCTAC-AACCATGCCAAAAATTTTCTAGGAGGAGATAAAACCCTATTTATAGACCTATCAGTTGCTCCTTGCTTAGGTTGTAACATAGTTTCCACTTTAAGCCTGATATGACCTCCCTGGACTTCTCTGGTCTCTAATAATGTTCCTTTCATCCTGAAGTTTCCCACATTTATCTTTATCTCCACCCGGTACTTAAGTTAAGCTACTATGGGTTGGGGGAAGGGAGAAGGAAAGAATCTCCTTTGTAAAAGCCATCTTCTACAGAAGAGTTTTAGGTAATTTTCAGGAACTTAAAA--AATGAAAGATAGGAGTTCTTCACTTGGTGGGCTTTTTTG---GGAGAGAACCTCATAAATATTCAACAATCATCAGGAATACTGCTACAC-AGTAATCAATGCATATGGGAAATGGAAATGGCAATAAGGCCTACTGGTGTCTT-AATCGGTGTCTGA-------------TTTTGCATCTTTTAAAAATCCAACAAGA--GTAAAGTTA-----TTTTAA-----------------------TACAGAGGATACTACATTCTCTAATCAAAGGAAAGCTAATCAAGGGAGCCAAACTATAAATAAATGTAAG-AAAT----------CTTTCCTAAAAATTGTGATCTCAGGGATTAAGTTGTTCTTATTGGTGTTGTTTACATTAGCTACTGGTATCTTTACACTCCTCACTTAAAATGCTAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81155631 1687 - 96509753 ACAAATGTAATCTATTTTGATGACTGAT-AATCA------------TAATTTCAACAAAGTCATGATTTTTTGCTCGTTAAACAAACTATAACTGAATCTCTTTAAC---TTTTGTA---Ctt-aaaatgatttaacttctcc-aaatgtg-tttaaagtttg-aaaaaaagccaatgaagtcacttcttgaagccattaattcatcttttt-acactacttctggtgact---ttaat----ccacacacacattgtacatgagtcatactggtgccgtgtggttcaattcattatattttgaaaagtactctatggtcaaattaactttgagaaaCACGCTTCAAGCAATTTTACTGTTTGCCCAATTTGA-ATTTTCGTAAACTGCAAACAGGATATGTAAATTAATAGATGC---------------TTTTTTACAAATTTCACATATACTCATAGGAAGAAAACAAGCTATCCAGGGGTGTCAGAGATTAGCTAGCTGACAGGCA---GACAGATGCCAAGAATTTGCTCCACAATT-----------------------------TAAAGGGCTACAATCAGGATAACAGAAGTGTGAGAAACAGACTCA-GACAGCTTAAGGGTTTTTGTTTCCCAGAAGGAATACCAGTGGAAGGGATACCACTGCCCATTTCTATATCTTTCTGTTCTGAATAGCCATATCCAAGCAGCTTTAC--TG----TGTGAGATTCCTGGAGAATTAGAACTACTGCCACTTCCCTCGATGATTCACTTG--TAATGCCAACTTATGAGTCTGAATGCACACAAAGGAGGTTGAGGGACTTCTGAACTAGCAGGAAAAAA-------GTTGAAATAACATTATTTTCTGAGAAGGTAATCTATTTTAATCCAAACAAATCCA-CTGGGCTAGACCATTCTATCCCACATCTAA---GCAATGGCTGCAATATCAAAATGTTCCTAAAAA-TTAGTACATGCCAAACTCTATAAACTTATTTTCAGGCTATGACTTTACTTTTAATAACATAAATGAGTTCAGTGGGACTTATTTTAATTCTTTTTG--AA-ACGGTTTA-TTTTTAGTAAATATAATAGTC----------CCCCACATGGAAAGCTAC-AACCATGCCAAAAATTTTCTAGGAGGAGATAAAACCCTATTTATAGACCTATCAGTTGCTCCTTGCTTAGGTTGTAACATAGTTTCCACTTTAAGCCTGATATGACCTCCCTGGACTTCTCTGGTCTCTAATAATGTTCCTTTCATCCTGAAGTTTCCCACATTTATCTTTATCTCCACCCGGTACTTAAGTTAAGCTACTATGGGTTGGGGGAAAGGAGAAGGAAAGAATCTCCTTTGTAAAAGCCATCTTCTACAGAAGAGTTTTAGGTAATTTTCAGGAACTTAAAA--AATGAAAGATAGGAGTTCTTCACTTGGTGGGCTTTTTTG---GGAGAGAACCTCATAAATATTCAACAATCATCAGGAATACTGCTACAC-AGTAATCAATGCATATGGGAAATGGAAATGGCAATAAGGCCTACTGGTGTCTT-AATCGGTGTCTGA-------------TTTTGCATCTTTTAAAAATCCAACAAGA--GTAAAGTTA-----TTTTAA-----------------------TACAGAGGATACTACATTCTCTAATCAAAGGAAAGCTAATCAAGGGAGCCAAACTATAAATAAATATAAG-AAAT----------TTTTCCTAAAAATTGTGATCTCAGGGATTAAGTTGTTCTTATTGGTGTTGTTTACATTAGCTACTGGTATCTTTACACTCCTCACTTAAAATGCTAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76411792 1686 + 90941950 ACAAATGTAATCTATTTTGATGACTGAT-AATCA------------TAATTTCAACAAAGTCATGATTTTTTGCTCGTTAAACAAACTATAACTGAATCTCTTTAAC---TTTTGTA---CTT-AAAATGATTTAACTTCTCC-AAATGTg-tttaaagtttg-aaaaaaagCCAATGAAGTCACTTCTTGAAGCCATTAATTCATCTTTTT-ACACTACTTCTGGTGACT---TTAAT----CCACACACACATTGTACATGAGTCATACTGGTGCCGTGTGGTTCAAttcattatattttgaaaagtactCTATGGTCAAATTAACTTTGAGAAACACGCTTCAAGCAATTTTACTGTTTGCCCAATTTGA-ATTTTCGTAAACTGCAAACAGGATACGTAAATTAATAGATGC---------------TTTTTTACAAATTTCACATATACTCATAGGAAGAAAACAAGCTATCCAGGGGTGTCAGAGATTAGCTAGCTGACAGGCA---GACAGATGCCAAGAATTTGCTCCACAATT-----------------------------TAAAGGGCTACAATCAGGATAACAGAAGTGTGAGAAACAGACTCA-GACAGCTTAAGGGTTTTTGTTTCCCAGAAGGAATACCAGTGGAAGGGATACCACTGCCCATTTCTGTATCTTTCTGTTCTGAATAGCCATATCCAAGCAGCTCTAC--TG----TGTGAGATTCCTGGAGAATTAGAACTACTGCCACTTCCCTCGATGATTCACTTG--TAATGCCAACTTATGAGTCTGAATGCACGCAAAGGAGGTTGAGGGACTTCTGAACTAGCaggaaaaaa-------gttgaaataacattattttctgaGAAGGTAATCTA-TTTAATCCAAACAAATCCA-CTGGGCTAGACCATTCTATCCCACATCTAA---GCAATGGCTGCAATATCAAAATGTTCCTAAAAA-TTAGTACATGCCAAACTCTATAAACTTATTTTCAGGCTATGACTTTACTTTTAATAACATAAATGAGTTCAGTGGgacttattttaattctttttg--aa-acggttta-tttttagtaaatataatAGTC----------CCCCACATGGAAAGGTAC-AACCATGCCAAAAATTTTCTAGGAGGAGATAAAACCCTATTTATAGACCTATCAGTTGCTCCTTGCTTAGGTTGTAACATAGTTTCCACTTTAAGCCTGATATGACCTCCCTGGACTTCTCTGGTCTCTAATAATGTTCCTTTCATCCTGAAGTTTCCCACATTTATCTTTATCTCCACCCGGTACTTAAGTTAAGCTACTatgggttgggggaagggagaaggaaagaatctCCTTTGTAAAAGCCATCTTCTACAGAAGAGTTTTAGGTAATTTTCAGgaacttaaaa--aatgaaagataggAGTTCTTCACTTGGTGGGCTTTTTTG---GGAGAGAACCTCATAAATATTCAACAATCATCAGGAATACTGCTACAC-AGTAATCAATGCATATGGGAAATGGAAATGGCAATAAGGCCTACTGGTGTCTT-AATCGGTATCTGA-------------TTTTGCATCTTTCAAAAATCCAACAAGA--GTAAAGTTA-----TTTTAA-----------------------TACAGAGGATACTACATTCTCTAATCAAAGGAAAGCTAATCAAGGGAGccaaactataaataaatataag-aaat----------ttttCCTAAAAATTGTGATCTCAGGGATTAAGTTGTTCTTATTGGTGTTGTTTACATTAGCTACTGGTATCTTTACACTCCTCACTTAAAATGCTAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18680427 1687 + 33263144 ACAAATGTAATCTATTTTGATGATTGAT-AATCA------------TAATTTCAACAAAGTCATGATTTTTTGCTCGTTAAACAAACTATAACTGAATCTCTTTAAC---TTTTGTA---Ctt-aaagtgatttaacttctcc-aaatgtg-cttaaagtttg-aaaaaaagccaatgaagtcacttcttgaagccattaatttatcttttt-acactacttctggtgact---ttaat----ccacacacacattgtacatgagtcatactggtgccgtgtggttcaattcattatattttgaaaagtactctatggtcaaattaactttgagaaaCACGCTTCAAGCAATTTTACTGTTTGCCCAATTTGA-ATTTTCACAAACTGCAAACAGGATACATAAATTAATAGATGC---------------TTTTTTAAAAATTTCACATATACTCATAGGAAGAAAACAAGCTATCCAGGAGTGTCAGAGATTAGCTAGCTGACAGGCA---GACAGATGCCAAGAATTTGCTCCACAATT-----------------------------TAAAGGGCTACAATCAGGATAACAGAAGTGTGAGAAACAGACTCA-GACAGCTTAAGGGTTTTTGTTTCCCAGAAGGAATACCAATGGAAGGGATACCACTGCCCATTTCTGTATCTTTCTGTTCTGAATAGCCATATCCAAGCAGCTTTAC--TG----TGTGAGATTCCTGGAGAATTAGAACTACTGCCACTTCCCTCAATGATTCACTTG--TAATGCCAACTTATGAGTCTGAATGCACGCAAAGGAGGTTGAGGGTCTTCTGAACTAGCAGGAAAAAA-------GTTGAAATAACATTATTTTCTGAGAAGGTAATCTATTTTAATCCAAACAAATCCA-CTGGGCTGCACCATTCTATCCCACATCTAA---GCAATGGCTGCAATATCAAAATGTTCCTAAAAA-TTAGTACATGCCAAACTCTATAAACTTATTTTCAGGCTATGACTTTACTTTTAATAACATAAATGAGTTCAGTAGGACTTATTTTAATTATTTTTG--AA-ACGGTTTA-TTTTTAGTAAATATAATAGTC----------CCCCACATGGAAAGCTAC-AACCATGCCAAAAATTTTCTAGGAGGAGATAAAACCCTATTTATAGACCTATCAGTTGCTCCTTGCTTAGGTTGTAACATAGTTTCCACTTTAAGCCTGATATGACCTCCCTGGACTTCTCTGGTCTCTAATAATGTTCCTTTCATCCTGAAGTTTCCCACATTTATCTTTATCTCCACCCGGTACTTAAGTTAAGCTACTATGGGTTGGGGGAAGGGAGAAGGAAAGAATCTCCTTTGTAAAAGCCATCTTCTACAGAAGAGTTTTAGGTAATTTTCAGGAACTTAAAA--AATGAAAGATACGAGTTCTTCACTTGGTGGGCTTTTTTG---GGAGAGAACCTCATAAATATTCAACAATCATCAGAAATACCGCTACAC-AGTAATCAATGCATATGGGAAATGGAAATGGCAATAAGGCCTACTGGTGTCTT-AATCGGCATCTGA-------------TTTTGCATCCTTTAAAAATCCAACAAGA--GTAAAGTTA-----TTTTAA-----------------------TACAGAGGATACTACATTCTCTAATCAAAGGAAAGCTAATCAAGGGAGCCAAACTATAAATAAATATAAG-AAAT----------TTTTCCTAAAAATTGTGATCTCAGGGATTAAGTTGTTATTATTGGTGTTGTTTACATTAGCTACTGGTATCTTTACACTCCTCACTTAAAATGCTAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198383679 1707 + 210400635 ACAAATGGAATCTATTTGAATAATCA---TATTATAAATACTTACTTAATTTCAACAAAGTCATGGGTTTTTGCTCTTTAAACAAAATATACCTGAATCTCTTTAAT---TTTTGTA---CCTAAAAATGATTTATCTTCTCCAGAATGTG-TTTAAAGTTTGAAAAAAAAGCCAATGAAGtcacttcttgaagccattaactcatctttg--acactacttctggtgact---ttaatacacacacacacacattgtacatgagtcatactggtgctgtgtcgttcaattcattatattttgggaagtaatctatggtcaaattaactttgagaaaCATGCTTTAAGCAATTTTACTGTTTGCCCAATTTGAGATTTTTGCA---TTCTAACAGAATACTTAAATTAATATATGCCTCTTTTTTTTTTTTTTTTTTACAAATTTCACATATACTCATAGGAAGAAAACAAGCTATACAGGGGTGTCAGAGATTAGCTAGCTGACAGGCA---GACAGATGCCAAGAATGTGCTCCACAATT-----------------------------TAAAGGGCTACAATCAGGATAACAGAAGTGTGAGAAACAGACTCA-GACAGCTTAAGGGTTTTTGTTTCCCAAAAGGAATAGCAAT-GAAGAGATACCATTGCCCATTTGTACACCTTTCTGTTCTGAACAGCCATATGCAAGCTGTTTTGC--TA-----GTGAGAGTCCCGGAGAATTAGAACTACTTCTACTTCCCTGGGTGATTCACTTG--TAATGCCAACTT--GAGCCTGAATGCATGCGAAGGAGTTTGAGGGTCTTTTGAACTAGC--AGAAAAA-------GCTGAAATAACATTATTTTCTGAGAAGGTAATCTATTTTAATCCATACAAATCCA-CTGGGCTAGACCATTCTATCCCTTATCTAA---GCAATGGTTGCAACATCAAAGTGTTCCTAAAAG-TTAGTACATGCCAAAGTCTATAAACTTATTTTCAGGCTATGACTTTACTTTTAATAAGATAAATGAGTGCCGTGGGaattattttaattatttctg--aa-attgtttattttttagtaaatataataGTCCCCCACCCCACCCCACATGGAAAGCTAC-AACCATGCCAACACTTTTCTAGGAGGAGATAAAACCCTATTTATAGACCTATCAGTTGCTCCTCCC--------TAACATAGTTTCCACTTTAGGCCTGATACGACCTCCTGTGACTTCTCTGGTCTCTAACAATGTTCCTTTCATCCTGAAGTTTCCCACATTTATCTTTATCTCTA-CGGGTACTTAAGTTAAGCTACTATGGGCTGGGAGAAGGGAGAAGG-AAGAATCTCCTTTTTAAAAGTCATCTCCTACAGAAGAGTTTTAGGTAGATTTCAGGAACTTAAAA--AACGAAAGACAGGAGTTCTTAACCTGGTGGGCTTTTTTG---AAAGAGAACCTCATAAATATTCAATAATCATCAGGAATACTGCTACAC-AGTAATCAATGCATATGGAAAATGGACATGGCAATAAGGGCTACTGGTGTCTTAAATCGGTGTCTGA-TTTATCTTGATGTTTTCCAACTTTTAAAACCCCAACAAGA--GTAAAGGTA-----TTTCAA-----------------------TATAGAGGATACTACATTCT---------------CTAATCAAGGAAGCCAAAATATAAATAAA--TAAG-AAAT----------TTTTCCTAAAAATTATGATCTCAGGGATTAATTTATTATTACCAGTGTTGTTTACATTAGCTACTGGTATTTTTACACTCTTCACTTAAAATGCTAA i calJac3.chr1 C 0 C 0 s mm10.chr15 77211981 1534 + 104043685 ACACATGCAGTCTGCTTTGATGATAAACAAATCTTAAATATT----TCATTTCAACA---TTTTGGAATTTTATTCTCAAAACAAAAC-TGGCCTAGTTTCTTTTACATTTTTTATATTCCTT-TGAATTGTTTAAC--ATTCAAAATGTGCTTTACAGTTTG---AAAGAGTAAATGAAGTCACCTCTT-----------------TTTCTGAGGCCACTTGTGGTAACT--CTTAAT----CCATATGCA-------------TTGAACCAGTGCTGTCTAGTACGGTTTA------------AAATATTCTAGGGTCAAA-TAGCTGAAAGTTATAC---TTAAGCAATTTTACTATTTGCCCAACTTAA------------------------------GACTAACAGGTGC-----------------TTTTAAAAAGTTTACATATACTGGTAGGAAGAAAACACACTG-CTAAGGGTGTCAGAGA----TGAGCTGACAGTGATGGGGCAGATGCCAAAACTGT----CACAAATGCTGTAATCAGGATAAGAGGGATAAAAAGCAAAGAGCTGCAATCAGGATA--AGAGGGTTGAGAACCGGGCTCCTGACAGTTCCTG---TTTTGCTTCTC-----------CAATGGAAGGGCTG---------GTTTGTGGAGC-TTCTGCTCTGAACTGCCATGTGCATCCAGCTTTAC--AG----GGCGAG-CTGTTAGGGAG--AGAGCTGCC-CTGCCTGTCTAGATAA-----ACA--CAGCACCAACTCCTGGGTCTGAATGCAGAGGAAGGAG--TGGGAGTCTTCTGAGCTAGC-AAGAACTG-------ACTGGAG---------CTTCTAAGAAGGTAG-CTATCTAACTCCATACTAG-----ACAGACTACACTGTTCTATCCCGGATCTAA---CCAATGGTTTTAACAACAAAGAGTTCCTAAAAC-TTAGTATAGACCA------------CTAGTTTCAGGCCACGGCAATAC-------AACACAAATGAATCCATTGTGATTTATTTTAATTATTTTTGGAAA-ATGGTTTA-TTTTTAGTAAATATTGTA-TC----------CCCCACATGGGAAGCTACAAACCATGCCAGAAATGTTCTTTGAGGAGATAAAATCCTATTAATAGACCTATCAGTTGCTCCTTACTTAGGTTGTAACATAGTTTCCACTTTAG--CTGCTATGACCTCTCCTGACCCCTCCGAGCC---AGAAGGCTGCTCTCATCTCAAG--TCCCCACATTTATCTCTA---------GGTACTTAAGCGAAGCGAGCAAGGCTGCGAGGAGGAGA------AAGAAGCTCCTTTCCGTAGGCCTTCTCCCACGGCAAAGTTTAAGGTAAATTCTGAGAGCTTAAAA--GG-----------ACTCCTTCCTTTGGAATGCTTTGTGGCTCGGAACTAACTCTGTGGATGTTCAACAGTCATTCACAGCCGTGCTGCAC-GGCAAGCCACTCGTG-GGGCAATGAAAA--GCTCCAAGCCCTGC-AGCGCCTT-CATGTAAGCTTGAGCTCATCCTACTGTTCCCTAACCT-----AGGCCGGCTACACTGTGAAGCTG-----TCTCAAAACAAAAAACCCCAGTCTCTGAGTATAAAGCATAATATATTGTCTAA-----------CTTTTTAA---AACCAAG----GACTAAATGTAAA-AGACT-----AATGTTTCCCTAAAAACTGTGATCTCAAGGGTTAGG---------------------------GTTGCCAGCACCTCTACATTC-TCACTTTAAAGGTTAA i mm10.chr15 I 522 I 482 s canFam3.chr10 40997311 1597 - 69331447 ------------------------------------------------------------GTATGG-------------AAAACAACAATGGCTTAATCTCTTTCAT---GTTTACA---CTT---aatgatttaacttctctaaaatgtgtcttgaagtctg--aaaaaagcaaataatgg-acttcctgaagccattaacttgtctttg--aaaccatttctggggactactttaat----ccatgcccacattgtgcatgagtcataactacactgtg---ttcaactcattatattttgaaaagtattccctggtcaaa-taactttgaggaaCATGTTTT-AGTAATTTCACTATTTGCCAAATTTCAGCTTTTCTTAATCTTCTAAGAAGATCCTGAAATTAATAGATGC----------------TTTTTACTAATTTCAAATACACTCACTGGAAGAAAACAAGCTACCCAGGGGTGTCAGAGA----TTAGCTGACAGGCA---GACAGATGCCAAGAATTTGCTGCACATTT-----------------------------TAAAGGGCTACAATCAGGATAACAAGAGTGTGAGAAACAAAGTCA-GACATCTTGAAGGTTTTTGTT-CCAAGAAGGGCTATCAGAGG---------TATTGCCAATCTACATGCCACTCTCCTCTGAATGGCCATATCTGAGCAGTTTTAA--TGAAGCAATGAGATTTCTGGGGAATTAGAACTATTCTACCTTCCCTAGATGACACACTTATTTTATATCTATTTCTGAGTCTG-ATGTAGG-ACTCGGGGCTGAGGGTCTTCTGAACCGGC-AGGAAAAATAAAAACACCGAAATAACATGATCGTCTGAGAAGGCAATCTA-TCTGATCCATGCCAG---A-GTGAATCAGACCATTGTATCTCAGATCTAACTGATGATGGCTTCAGTATCAAACTCCCCCCAAAAG-ATAGTACATACCAAACTCTATAAACTTATTTTCAGGCTATGACTAGAC--TCAATAACATAAATGAGTTCAGTGGGACTTACTTTAATCATTCTGA--AACACAGTTTA-TTTTTAGTAAATATAATAGTC----------CCCCACATGGGAAGCTAC-AACCATGCCAAAAAT-TTCTATGAGGAGATAAAATCCTATTTATAGACCTATCAGTTGCTCCTTGCTTAGGTTGTAACATAGTTTCCACTTTAAGCCTGATATGACCTCCCCTGACTTCTCTCCACTCTA---ATGTTCATTTCATCCTGAAGGTTCT--CTTTTATCTTTACCTTCCCAGGGTACTTAAGT-AAGCTACCATGGG-GGGTAGGGAGGAGAAGAAAAGAATCTCCTTTCCCTAAGCCTTCTCCTACTGGAGGGGTTTAGGTAAGTTTCAGGAACCTGAAATGGGGGAGAGAGAGGAGTTCTTCATTTGGTGAGCTTT-TTG---CCAGGGAACCTAATAAATACCTGGCAGTAAACAA-AACGCTGCTACACAAGCCAGGCATGCTTCTAGCAAACG-------------GGCCTCCTGAGGTCTC--ACCAGTGTATGA-CTTAGCTTAAAGTTTTTTACCTTTTAAAAACCCAACAAGA--ATAAATGTCAAAGTTTCTAA-----------------------CACAGAGAGTACTGTACTC-----------AAAAGCTAACCA-GGGAACCAAA----AGAGAAACATATG-AGATTTATTAATTTTTTTCCTAAAAATTGTGATCTGAGGGACTAAGCTGCTATTGT--------TTTACACTAGCTGCCGGAGTCTCTGCACTGC-CACTTAAAATGCTAA i canFam3.chr10 C 0 C 0 a score=895135.000000 s hg38.chr22_KI270876v1_alt 232681 257 + 263666 TTGGTGGAATCTCCCCTTCCCAATCTCTGCCTATGACTCCATCAACAATTTTAGAAGGTATAAGTACCTTATTCTAATCCAATGAGCCATTTTCA--ATTTCCTTTCACTAGCAGTGGCATGACCCATATCCCATCTCACCCCAGCCCTTCCCCACTCCATACTCTGGATAAAATTTTTAATGAACCCTGTTTTTACTGCTCCAGCAAATCCTAACCCCTTTCATCTCTAAACCTCAACAACATTTGCTGGTCTTGGTT s panTro4.chr22 34612858 257 + 49737984 TTGGTGGAATCTCCCCTTCCCAATCTCTGCCTATGACTCCATCAACAATTTTAGAAGGTATAAGTACCTTATTCTAATCCAATGAGCCATTTTCA--ATTTCCTTTCACTAGCAGTGGCATGACCCATATCCCATCTCACCCCAGCCCTTCCCCACTCCATACTCTGGATAAAATTTTTAATGAACCCTGTTTTTACTGCTCCAGCAAATCCTAACCCCTTTCATCTCTAAACCTCAATAACATTTGCTGGTCTTGGTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31032534 256 + 46535552 TTGGTGGAATCTCCCCTTCCCAATCTCTGCCTATGACTCCATCAACAATTTTAGAAGGTATAAGTACCTTATTCTAATCCAATGAGCCATTTTCA--ATTTCCTTTCACTAGCAGTGGCATGACCCATATCCCATCTCACCCCAGTCCTTCCCCACTCCATACTCTGGATAAAATTTTTAATGAACCCT-TTTTTACTGCTCCAGCAAATCCTAACCCCTTTCATCTCTGAACCCCAATAACATTTGCTGGTCTTGGTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100586035 257 - 115148730 TTGGTGGAATCTCCCCTTCCCAATCTCTGCCTATGACTCCATCAGCAATTTTAGAAGGTATAAGTACCTTATTCTAATCCAATGAGCCATTTTCA--ATTTCCTTTCACTAGCAGTGGCATGACCCATATCCTATCTCACCCCAGCCCTTCTCCACTCCATACTCTGGATAAAATTTTTAATGAATCCTGTTTTTACTGCTCCAGCAAATCCTAACCCCTTTCATCTCTGAACCCCAATAACATTTGCTGGTCTTGGTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80730779 257 + 95678458 TTGGTGGAATCTCCCCTTCCCAATCTCTGCCTATGACTCCATCAACAATTTTAGAAGGTATAAGTATCTTATTCTAATCCAATGAGCCATTTTCA--ATTTCCTTTCATTAGCAGTGGCAAGACCCATATCTCATCTCACCCCAGCCCTTCCCCACTCCATACTCTGGATAAAACTGTTAATGAATCCTGTTTTTACTGCTCCGGCAAATCCTAACCCCTTTCATCTCTGAACCCCAATAACATTTGCTGGTCTTGGTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81157318 257 - 96509753 TTGGTGGAATCTCCCCTTCCCAATCTCTGCCTATGACTCCATCAACAATTTTAGAAGGTATAAGTGTCTTATTCTAATCCAATGAGCCATTTTCA--ATTTCCTTTCATTAGCAGTGGCAAGACCCATATCTCATCTCACCCCAGCCCTTCCCCACTCCATACTCTGGATAAAACTGTTAATGAATCCTGTTTTTACTGCTCCGGCAAATCCTAACCCCTTTCATCTCTGAACCCCAATAACATTTGCTGGTCTTGGTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76413478 257 + 90941950 TTGGTGGAATCTCCCCTTCCCAATCTCTGCCTATGACTCCATCAACAATTTTAGAAGGTATAAGTGTCTTATTCTAATCCAATGAGccattttca--atttcctttcatTAGCAGTGGCAAGACCCATATCTCATCTCACCCCAGCCCTTCCCCACTCCATACTCTGGATAAAACTGTTAATGAATCCTGTTTTTACTGCTCTGGCAAATCCTAACCCCTTTCATCTTTGAACCCCAATAATATTTGCTGGTCTTGGtt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18682114 257 + 33263144 TTGGTGGAATCTCCCCTTCCCAATCTCTGCCTATGACTCCATCAAGAATTTTAGAAGGTATAAGTATCTTATTCTAATCCAATGAGCCATTTTCA--ATTTCCTTTCATTAGCAGTGGCAAGACCCATATCTCATCTCACCCCAGCCCTGCCCCACTCCATACTCTGGATAAAACTGTTAATGAACCCTGTTTTTACTGCTCCGGCAAATCCTAACCCCTTTCATCTCTGAACCCCAATAGCATTTGCTGGTCTTGGTT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198385386 256 + 210400635 TTGGTGGAATCT-CCCTTCCCAATCTCTGCCTATGGCTCCATCAACAATTCTACAAGATGTAAGTACCTTACTCTAATGCAATGAGCCATTTTCC--ATTTCCTTTCACTAGCAGTGGCATTACCCATATCCCATCTTATCCCAGCCCTTCCCCACTCCATACTCTGGATAAAATTTTTAATAAGCCCTGTTTTTACTGCTCCAGCAAATCATAACGCCTTTCATCTCTGAATCCTAGTAACATTTGCTGTCACTGGTT i calJac3.chr1 C 0 I 307 s canFam3.chr10 40998908 231 - 69331447 --------------------------CTGCTGA-GCCTCCATCCACAATTCCAGAAGG-GTAAGGGCCTTCTCCTCATTCAATGAGCCATGTTCACTGTCTCCTTTCCCCAGAAGGGGCGAGAGCTATACCCCATCTCACCCTGGCCATGCCCCATTCCATGATCTGGATGAGGTTGTAAATGAACCCTATCTTTACTGCTCTGGCAAACCCTAACCCCTTTGATCTCTGAACCCCGGTAAAATGTGCCGTCTCTGACT i canFam3.chr10 C 0 C 0 e mm10.chr15 77213515 482 + 104043685 I a score=4194911.000000 s hg38.chr22_KI270876v1_alt 232938 1247 + 263666 CACTCATTTTTTTTT---AATCTTAA--ATACATACTTCTTTTTTGTTAATTCCATGTTTGTAGGTCTTGTATCCTGAATGAGACTGCAAATTGTACTCAAC-GTAAAGGCCTAGTGGGCAATGA-CACATCTT----ATCTCAGCATCATCAGTTGGTCATGCCAACTGACTGGCATATAACAGGCACATAATAAACATTATGGAACTATTTGTTGAGGTGATCTGGATGGCAGAAACAGCATACT-ACGTATACTTCTCTTATATGAATCTCTC-AGAGCACACCAC-TGGGAAAGCCCAACATAAAGTGTGGCAGAGCTAAATCACAAGCAACTCCTCAAGAGAGGAAGGGAGAAGAACATGAGCATTCATTAATACCAACCCATCTTTCAT--TAGATTCCCATCAACATTCTCAGGAGCTCAAACAGATGGTGTGAA--CACAGGATGTACCAAGTGAT-GGAGCAAGCAATAACATTTCCTCACCGCAAGAAAATTC-TTCCACCTTT-TCCATCTACCTATATATTACTTAACCTTTAAGGCCTACCTCTTCCTGTCCA-CCCAATTCACAGTGAAATCCCCTAAGCTCTCCAGTACCTgaggatgagtagctatttagcattttcacttaaaaca---agggatggatccaaactttaac--aaaaataattcaaaataaacaccagtaaaagtcacct-gattgtaaaagttggcaaacaccaggaA--ATACTTCTTTT---AATTTTTTTTCAGTTGTTAAACTTATCATATAAAAT-GTATTTCCCTTTTTAAAAGAAGATATATGGG-TTTTCCGGGGTGATCTGAGCTGAGGCATGAGCATGAATGATCAAATAAAACTCTCAAGATCATATCCCagaggcagcatggcattgaagaaagaactgaggtttgaaagtga---aacagacctacaatc-aaattgccaaatcaccattcattagcagtgaccttgagcaagtact-----ttaacccctcttaa--cctgttttgtaatcaacaaatgcagaattaagatgaaaattagaaataatgtacataaaacacctaggccagtgcctTTCTTAATAAATTTCAATTGTTAATGGTTTTGTCTATTGTCA-TTTTTCTTAGCCCACAACAAATGACAGAAAATGATTTATTGGCAAATCTGACATTTTAGGGCTTCTACTGTAA-TTTTTTTTTAATTGGAAGTAACCAAAATATTAATAAGAACTCACCTTTAAAAAGCTATTTTCTCTGTGAATTTAAAAGTAAA s panTro4.chr22 34613115 1247 + 49737984 CACTCATTTTTTTTT---AATCTTAA--ATACATACTTCTTTTTTGTTAATTCCATGTTTGTAGGTCTTGTATCCTGAATGAGACTGCAAATTGTactcaactgtaaaggcctagtgggcaatga-cacatctt----atctcagcatcatcagttggtcatgccaactgactggcatataacaggcacataataaacattATGGAACTATTTGTTGAGGTGATCTGGATGGCAGAAACAGCATACT-ACGTATACTTCTCTTATATGAATCTCTC-AGAGCACACCAC-TGGGAAAGCCCAACATAACGTGTGGCAGAGCTAAATCACAAGCAACTCCTCAAGAGAGGAAGGGAGAAGAACATGAGCATTCATTAATACCAACCCATCTTTCAT--TAGATTCCCATCAACATTCTCAGGAGCTCAAACAGATGGTGTGAA--CACAGGATGTACCAAGTGAT-GCAGCAAGCAATAACATTTCCTCACCGCAAGAAAATTC-TTCCACCTTT-TCCATCTACCTATATCTTACTTAACCTTTAAGGCCTACCTCTTCCTGTCCA-CCCAATTCACAGTGAAATCCCCTAAGCTCTCCAGTACCTgaggatgagtagctatttagcattttcacttaaaaca---agggatggatctaaactttaac--aaaaataattcaaaataaacaccagtaaaagtcacct-gattgtaaaagttggcaaacaccaggaA--ATACTTCTTTT---AATTTTTTTTCAGTTGTTAAACTTATCATATAAAAT-GTATTTCCCTTTTTAAAAGAAGATATATGGG-TTTTCTGGGGTGATCTGAGCTGAGGCATGAGCATGAATGATCAAATAAAACTCTCAAGATCATATCCCagaggcagcatggcattgaagaacgaactgaggtttgaaagtga---aacagacctacaatt-aaattgccaaatcaccattcattagcagtgaccttgagcaagtact-----ttaacccctcttaa--cctgttttgtaatcaacaaatgcagaattaagatgaaaattagaaataatgtacataaaacacctaggccagtgccCTTCTTAATAAATTTCAATTGTTAATGGTTTTGTCTATTGTCA-TTTTTCTTAGCCCACAACAAATGACAGAAAATGATTTATTGGCAAATCTGACATTTTAGGGCTTCTACTGTAA-TTTTTTTTTAATTGGAAGCAAC-AAAATATTAATAAGAACTCACCTTTAAAAAGCTATTTTCTCTGTGAATTTAAAAGTAAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31032790 1233 + 46535552 CACTCA--TTTTTTT---AATCTTAA--ATATATACTTCTTTTTTGTTAATTCCATGTTTGTAGGTCTTGTATCCTGAATGAGACTGCAAATTGTactcaactgtaaaggcctagtgggcaatga-cacatctt----atctcagcatcaccagttggtcctgccaacttact-----------ggcacataataaacattatggaaatatttgttgaGGTGATCTGGATGGCAGAAACAGCGTACT-ATGTATACTTCTCTTACATGAATCTCTC-AGAGCACACCAC-TGGGAAAGCCCAACATAACCTGTGGCAGAGCTAAATCACAAGCAACTCCTCAAGAGAGGAAGGGAGAAGAACACGAGCATTCATTAATACCAACCCATCTTTCAT--TAGATTCCCACCAACATTCTCAGGAGCTCAAACAGATGGTGTGAA--CACAAGATGTACCAAGTGAT-GGAACAAGCAATAACATTTCCTCACCCCAAGAAAATTC-TTCCACCTTT-TCCATCTACCTATATCTTACTTAACCTTTAAGGCCTACCTCTTCCTGTCCA-CCCAATTCACAGTGAAATCCCCTAAGCTCTCCAGTACCTGAGGATGAGTAGCTATTTAGCATTTTCACTTAAAACA---AGGGATGGATCTAAACTTTAAC--AAAAATAATTCAAAATAAACACCAGTAAAAGTTACCT-GATTGTAAAAGTTGGCAAACACCAGGAA--ATACTTCTTTT---AATTTTTTTGCAGTTGCTAAACTTATCATATAAAAT-GTATTTCCCTTTTTAAAAGAAGACATATGGG-TTTTCCAGGGTGATCTGAGCTGAGGCATGAGCATGGATGATCAAATAAAACTCTCAAGATCATATCCCagaggcagcatggcactgaagaaagaactgaggtttgaaagtga---aacagacttacaatc-aaattgccaaatcaccattcattagcagtgaccttgagcaagtact-----ttaacccctcttaa--cctgttttgtaatcaacaaatgcagaattaagacgaaaattagaaataatgtacataaaacacctaggccagtgcctTTCTTAATACATTTCAATTGTTAATGGTTTTGTCTACTATCA-TTTTTCTTAGCCCACAACAAATGACAGAAAATGATTTATTGACAAATCTGACATTTTAGGGCTTCTACTGTAA--TTTTTTTTAATTGGAAGCAAT-AAAATATTAATAAGAACTCACCTTTAAAAAGCTATTTTCTCTGTGAATTTAAAAGTAAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100586292 1242 - 115148730 CACTCA-TTTTTTTT---AATCTTAA--ATATATACTTCTTTTTTGTTAATTCCATGTTTGTAGGTCTTGTATCCTGAATGAGACTGCAAATTGTACCCAACTGTAAAGGCCTAGTGGGCAATGA-CACATCTT----ATCTCAGCATCACCAGCTGGTCATGCCAACTGACTGGCATATAACAGGCACATAATAAACATTATGGAAATATTTGTTGAGGTGATCTGGATGGCAGAAACAGCGTACT-ACATATACTTCTCTTATATGAATCTCTC-AGAGCACACCAC-TGGGAAAGCCCAACATAATGTGTGGCAGAGCTAAATCACAAGCAACTCCTCAAGAGAGGAAGGGAGAAGAACATGAGCATTCATTAATACCAACCCATCTTTCAT--TAGATTCCCATCAACATTCTCAGGAGCTCAAACAGATGGTGCGAA--CACAGGACGTACCAAGTGAT-GGAGCAAGCAATAACATTTCCTCACCCCAAGAAAATTC-TTCCACCTTT-TCCATCTACCTATATCTTACTTAACCTTTAAGTCCTACCTCTTCCTGTCCACCCCAATTCACAGTGAAATCCCCCAAGCTCTCCAGTACCTgaggacgagtagctatttagcattttcacttaaaaca---agggatggatctaaactttaacaaaaaaataattcaaaataaacgccagtaaaagttacct-gattgtaaaagttggcaaacaccagTAA--ATACTTCTTTT---AATTTTTTTTCAGTTGTTAAACTTATCATATAAAAT-GTATTTCCCTTTTTAAAAGAAGACATATGGG-TTTTCTGGGGTGATCTGAGCTGAGGCATGAGCATGGATGATCAAATAAAACTCTCAAGATCATATCCCagaggcagcatggcattgaagaaagaactgaggtttgaaagtga---aacagacctacaatc-aaattgccaaatcaccattcattagcagtgaccttgagcaagtact-----ttaacccctcttaa--cctgttttgtaatcaacaaatgcagaattaagatgaaaattagaaataatgtacataaaacacctaggccagtgcctgTCTTAACAAATTTCAATTGTTAATGGTTTTGTCTACTGTCA-TTTTTCTTAGCCCACAACAAATGACAGAAAATGATTTATTGGCAAATTTGACATTTTAGGGCTTCTACTGTAATTTTTTTTTTAATTGGAAGCAAC-AAAATATCAGTAAGAACTCACCTTTAA--------TTTCTCTGTGAATTTAAAAGTAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80731036 1252 + 95678458 CACTCATTTTTTTGTTTAAATCTTAA--ATATATACTTATTTTTTGCTAATTCCATGTTTGCAGGTCTTGTATCCTGAATGAGACTGCAAATtctattcaaatgtaaaggcctagtgggcaatga-cacatcttgctcatctcagcatcaccagttggtcatgccaactgactagcacataacaggcacataataaacattATGGAAATATTTGTTGAGGTGATCTGGATGGCAGAAACAGTGTACT-ATGTATACTTCTCTTATATTAATCTCTC-AGAGCACACCAC-TGGGAAAGCCCAACACAATGTGCGGCAGAGCTAAATCACAAGCAACTCCTGAAGAGAGGAAGGGAGAAGAACATGAGCATTAATTAATACCAACCCATCTTTCAT--TAGATTCCCATCAACATTCTCAGGAGCTAAAAGACATGGTGTGAA--CACAGGATGTACCAAGTGATAAGAGCAAGCAAT-ACATTTCCTCACCCCAAGAAAAGTC-TTCCACTTTT-TCCATCTACCTATATCTTA-TTAACCTTTAAGGCCTACCTCTTCCTGTCCACCCCAATTCACAGTGAAATACCCTAAGCTCTCCAGTACCTgaggatgagtagctacttagcattttcacttaaaaca---agggatggatctaaactttaac--aaaaataattcaaaataaacaccagtaaaagtta-ct-gattgtaaaagttggcaaacaccaggaA--ATACTTCTCTT---AATTTTTTCTCAGTTGTTAAATTTATCACATAAGAT-GTATTTCCCTTTTTAAAAGAAGACATATGGG-TTTTCTGGGGTGATCTGAGCTGAGGCATGATCATGGATGATCAAATAAAACTCTCAAGATCATATCCCagaggcagcatggcactgaagaaagaagtgaggtttgaaagtga---aacagacctacaatc-aaattgccaaatcaccattcattagcagtgaccttgagcaagtact-----ttaacccctcttaa--cctgtta-gtaatcaacaaatgcagaattaagatgaaaattagaaataatgtacataaaacacctaggccagtgcctCTCTTGATAAACTTCAATTGTTAATGGTTTTGTCTATTGTCA-TTTTTCTTAGCCCACAACAAATGATAGAAAATGATTTATTGGCAAATCTGACATTTTAGGGTTTCTACTGTAA-TTTTTTAAAAATTGGAAGCAAC-AAAATATCAATAAGAACTCACCTTTAAAAAGCTATTTTGTCTATGAATTTAAAAGTAAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81157575 1253 - 96509753 CACTCATTTTTTTGTTTAAATCTTAA--ATATATACTTATTTTTTGCTAATTCTATGTTTGCAGGTCTTGTATCCTGAATGAGACTGCAAATTCTATTCAAATGTAAAGGCCTAGTGGGCAATGG-CACATCTTACTCATCTCAGCATCACCAGTTGGTCATGCCAACTGACTAGCACATAACAGGCACATAATAAACATTATGGAAATATTTGTTGAGGTGATCTGGATGGCAGAAACAGTGTACT-ATGTATACTTCTCTTATATGAATCTCTC-AGAGCACACCAC-TGGAAAAGCCCAACACAACGTGCGGCAGAGCTAAATCACAAGCAACTCCTGAAGAGAGGAAGGGAGAAGAACATGAGCATTAATTAATACCAACCCATCTTTCAT--TAGATTCCCATCAACATTCTCAGGAGCTAAAAGACATGGTGTGAA--CACAGGATGTACCAAGTGATAAGAGCAAGCAAT-ACATTTCCTCACCCCAAGAAAAGTC-TTCCACTTTT-TCCATCTACCTATATCTTA-TTAACCTTTAAGGCCTACCTCTTCCTGTCCACCCCAATTCACAGTGAAATACCCTAAGCTCTCCAGTACCTgaggatgagtagctacttagcattttcacttaaaaca---agggatggatctaaactttaac--aaaaataattcaaaataaacaccagtaaaagtta-ct-gattgtaaaagttggcaaacaccaggaA--ATACTTCTCTT---AATTTTTTCTCAGTTGTTAAATTTATCACATAAGAT-GTATTTCCCTTTTTAAAAGAAAACATATGGG-TTTTCTGGGGTGATCTGAGCTGAGGCATGATCATGGATGATCAAATAAAACTCTCAAGATCATATCCCagaggcagcatggcactgaagaaagaagtgaggtttgaaagtga---aacagacctacaatc-aaattgccaaatcaccattcattagcagtgaccttgagcaagtact-----ttaacccctcttaa--cctgttatgtaatcaacaaatgcagaattaagatgaaaattagaaataatgtacataaaacacctaggccagtgcctCTCTTAATAAATTTCAATTGTTAATGGTTTTGTCTATTGTCA-TTTTTCTTAGCCCACAACAAATGATAGAAAATGATTTATTGGCAAATCTGACATTTTAGGGTTTCTACTGTAA-TTTTTTAAAAATTGGAAGCAAC-AAAATATCAATAAGAACTCACCTTTAAAAAGCTATTTTGTCTATGAATTTAAAAGTAAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76413735 1253 + 90941950 cactcatttttttgtttaaatcttaA--ATATACACTTATTTTTTGCTAATTCCATGTTTGCAGGTCTTGTATCCTGAATGAGACTGCAAATTCTATTCAAATGTAAAGGCCTAGTGGGCAATGA-CACATCTTACTCATCTCAGCATCACCAGTTGGTCATGCCAACTGACTAGCACATAACAGGCACATAATAAACATTATGGAAATATTTGTTGAGGTGATCTGGATGGCAGAAACAGTGTACT-ATGTATACTTCTCTTATATGAATCTCTC-AGAGCACACCAC-TGGGAAAGCCCAACACAACGTGCGGCAGAGCTAAATCACAAGCAACTcctgaagagaggaagggagaagaacaTGAGCATTAATTAATACCAACCCATCTTTCAT--TAGATTCCCATCAACATTCTCAGGAGCTAAAAGACATGGTGTGAA--CACAGGATGTACCAAGTGATAAGAGCAAGCAAT-ACATTTCCTCACCCCAAGAAAAGTC-TTCCACTTTT-TCCATCTACCTATATCTTA-TTAATCTTTAAGGCCTACCTCTTCCTGTCCACCCCAATTCACAGTGAAATACCCTAAGCTCTCCAGTACCTGAGGATGAGTAGCTACTtagcattttcacttaaaacA---AGGGATGGATCTAaactttaac--aaaaataattcaaaataaacacCAGTAAAAGTTA-CT-GATTGTAAAAGTTGGCAAACACCAGGAA--ATacttctctt---aattttttctcAGTTGTTAAATTTATCACATAAGat-gtatttccctttttaaaagaagacatatggg-TTTTCTGGGGTGATCTGAGCTGAGGCATGATCATGGATGATCAAATAAAACTCTCAAGATCATATCCCAGAGGCAGCATGGCACTGAAGAAAGAAGTGAGGTTTGAAAGTGA---AACAGACCTACAATC-AAATTGCCAAATCACCATTCATTAgcagtgaccttgagcaagtacT-----TTAACCCCTCTTAA--CCTGTTATGTAATCAACAAATGCAGAAttaagatgaaaattagaaataatgtacataaaacaCCTAGGCCAGTGCCTCTCTTAATAAATTTCAATTGTTAATGGttttgtctattttca-tttttcttagcccACAACAAATGACAGAAAATGATTTATTGGCAAATCTGACATTTTAGGGTttctactgtaa-ttttttttaaattggaagcaAC-AAAATATCAATAAGAACTCACctttaaaaagctattttgtCTGTGAATTTAAAAGTAAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18682371 1256 + 33263144 CACTCATTTTTTTGTTTAAATCTTAA--ATATATACTTATTTTTTGCTAATTCCATGTTTGTAGGTCTTGTATCCTGAATAAGACTGCAAATtctattcaactgtaaaggcctagtgggcaatga-cacatcttactcatctcagcatcaccagttggtcatgccaactgactagcatataacaggcacataataaacattATGGAAATATTTGTTGAGGTGATCTGGATGGCAGAAACAGTGTACT-ATGTATACTTCTCTTATATGAATCTCTC-AGAGCACACCAC-TGGGAAAGCCCAACACAACGTGCAGCAGAGCTAAATCACAAGCAACTCCTGAAGAGAGGAAGGGAGAAGAACATGAGCATTAATTAATACCAACCCATCTTTCAT--TAGATTCCCATCAACATTCTCAGGAGCTAAAAGACATGGTGTGAACTCACAGGATGTACCAAGTGATAAGAGCAAGCAAT-ACATTTCCTCACCCCAAGAAAATTC-TTCCACTTTT-TCCATCTACCTATATCTTACTTAACCTTTAAGGCCTACCTCTTCCTGTCCACCCCAATTCACAGTGAAATCCCCTAAGCTCTCCAGTACCTgaggatgagtagctatttagcattttcacttaaaaca---agggatggatctaaactttaac---aaaataattcaaaataaacaccagtaaaagtta-ct-gattgtaaaagttggcaaacaccaggaA--ATACTTCTCTT---AATTTTTTCTCAGTTGTTAAATTTATCACATAAGAT-GTATTTCCCTTTTTAAAAGAAGACATATGGG-TTTTCTGGGGTAATCTGAGCTGAGGCATGATCATGGATGATCAAATAAAACTCTCAAGATCATATCCCagaggcagcatggcactgaagaaagaagtgaggtttgaaagtga---aacagacctacaatcaaaattgccaaatcaccattcattagcagtgaccttgagcaagtact-----ttaacccctcttaa--cctgttgtgtaatcaacaaatgcagaattaagatgaaaattagaaataatgtacataaaacacctaggccagtgcctCTCTTAATAAATTTGAATTGTTAATGGTTTTGTCTATTGTCA-TTTTTCTTAGCCCACAACAAATGACAGAAAATGATTTATTGGCAAATCTGACATTTTAGGGTTTCTACTGTAA-TTTTTTTTAAATTGGAAGCAAC-AAAATATCAATAAGAACTCACCTTTAAAAAGCTATTTTGTCTGTGAATTTAAAAGTAAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198385949 1236 + 210400635 cACTCATTTTTTTTT-AAAATCTTAA--ATATACACTTCTTTTTTGTTAATTCCATATTTGTAGGTCTTGTATCCTGAACGAGACTGCAAATtctactcaattgtaaacacctagtaggaaatga-cacatcttactcatctcagcatcaccagt--gtcattccaagtgactgatatataacaggcacataataaacattATGAAAATATTTGCTAAGGTGATCTGGATGGCAGAAACAGTGTACT-GTGCATAATTCTCTTATATGTATCTCTCAAGAGCACACCGC---------ATAAACATTATGTGCGATAGTGCTAAATCACAAGAAATTCCTGAACAGAGGAAAAG-------TATGAGCATTAATTAATGCCAACCCATCTTTCAT--TAGATTCCTATTACCATTCACTGGAGCTAAAAGAGATAGT--GAA--CACAGGATGTGCCAAGTGAT-GGAGCAAACAATAACATTTCCTCACCCCAAGAAAATTC-TTCCACCTTT-TCCATCTACC--AATCTTACTTATCCTTTAAGGCCTACCTCTTCCTGTTCACCCCAATTCACAGTGAAATCCCCTAA-CTCTCCAGTACCTGAGGATGAGTAGCTATTTATCATTTTCACTTACAACA---AGGTACGGATCTAAACTTTAAC--AAAAATAATATGAAATAAACACCAGTGAAAGTTGCCT-GATTACAAAAGTTGGCAAACACCAGGAA--ATACTTCTCTT---AATTTTTTTTCAGTTATTAATATTATCATATAAAAT-GTATTTCCCATTTTAAAAGAAGACATATGGG-TTTTCTGGGGTGATCTGAGCTGATGCATGAGCATAGATGATCAAATATAACTCTCAAGATCATGCCCCagaggcagcatggcactgaagaacaaagttaggtttgaaagtgaaacaacagacctacaatc-aaattgccaaatcaccattcattagcagtgaccttgagcaagtact-----ttaactcttcttaa--cctgttttgtcatctacaaaTGCAGAATTCAGATAAAAATTAGAAATAATGTACATAAAACACCTAGGCCAGTACTCCTCTTAATAAATTTCACTTGTTAATGGTTTTGGCTACTGTCA-TTTTTCTTAGCCTACAACAAATGACAGAAAATGATTTATTGGTAAATCTGACATTTTTAGGCTTCTACTGTAA-TTTTTTAAAAATTGGAAACAAT-AAAATATCAGTAAGAACTCACCTTAAAAAAGTTACTTTCTCTGTGAATTTAAGAGTAAA i calJac3.chr1 I 307 C 0 s canFam3.chr10 40999139 1243 - 69331447 CAATTTTTTTTTTAC---TACCTTAAGCATATAAAACTGCCTTTTGTTAATTCTGTATCTGTAGGTCTTATATCCTGAATGAGACTGTAAatt-----cgatgatgagctgctcaagggcagtggtcatgtcttattcatctcaggatcatcagt--gtttggccaggtgactggcatgtaacaggcacatggtactcattgttgaaATATCTGTTAGTCTGATCTGGATGACTGGGCCCACGTAGTAAAGCATACTTCTCTTTTGTGAATCTCTC-ACTGCACACAACTTAGGAGAGCCCAACATAACTT-TAACAGAAACGAATCACAAGCAGGTCATGAAAGGAGG----GAGCAGCCCACGGCCATCGAGTAATACCTAACCATCTTGCATTGTGGGTTCTTGTCCTCACTCTCACATGCTCAAAGATATGGC--AAA--CACAAGATATATCAGATGCT-GGGGCAAATGAGAATATTTCCTTACTCCAAGAAAATTCAATCTGCTTTTCTCCACCTACCTGTATATTATTCATCTTCTAAGGCCCACCTCTTCCTGCCCACCCTAATTCAGAGTGAAATCCTC--AACTCTCTAGGATCTGATAATTAGTAGTTATTTAATATTTTCACTTATAACCAGTAGGGAGGGATTTAAATTTCAGT--AAAAATAACTC----TAAACATTGGTAAAAATTATCTGGGTTGTTAAAGGTGGCAAAGACCAGAAAATATACAACTCTTAAAAAATTGTTTTCAACCCTGACATTTATCACATAAAATGGTACCACTCTTTTTAAAAGACAACATATGGATTTTTCTGGGGtgctcagagctaaggcatggacatg---gattaaatg-aactcccaagatcattttcCGgaggcagcatggtactaaagaaagatcatgggtttggaagtgg--------------catc-aaattgccaaatcaccactcacaagctgtgaccttgagcaaaggctcgaacctaacctctctcaacccctatttcttcgtctataaaagcagggctgttatgaaaatcagaaacaacatacatacaacacttaggttactgactgTCtaaataaattataattattaataGATCTGTTTATTGTCATTTTTTCTCAGCCCACAACAAAAGACAGAAAATGACTCCTTGGCAAATCTGACATTTTACAGCTACTATTATAA-TTTCTTTTAAATTAGTAGCAAC-AGAATATCAATAAGAACTCACCTAAAGAGAGCTATTTTCTC--TGAATTTTAAAGTAAA i canFam3.chr10 C 0 C 0 e mm10.chr15 77213515 482 + 104043685 I a score=405970.000000 s hg38.chr22_KI270876v1_alt 234185 150 + 263666 CCGTggccagttgcagtggctggtgcctataatcccagcactttgagaggcagaggaggaaaggaagattgcttgagcccacgagttcaagatcagcctgggcaacatagtgagactctgtctctatttttaaaaagt-aaaaaaaGTAAG s panTro4.chr22 34614362 150 + 49737984 CCCTggtcagttgcagtggctgatgcctataatcccagcactttgagaggcagaggaggaaaggaagattgcttgagcccacgagttcaagatcagcctgggcaacatagtgagactctgtctctatttttaaaaagt-aaaaaaaGTAAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31034023 148 + 46535552 CCCTggccagctgcagtggctgatgcctataatcccagcactttgggaggcagaggcggaaaggaagattgcttgagcccacgagttcaagatcagcctgggcaacacagtgaga--ctgtctctatttttaaaaatt-aaaaaaaGTAAG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100587534 144 - 115148730 CCCTggccagttgcagtggctgatgcctataatcccagcactttggaa---acaggcggaaaggag---ttcctttgaccacaagttcaagatcagcctgggcaacatagcaaaactctgtctctatttttaaaaagt-aaaaaaaGTAAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80732288 150 + 95678458 CCCTggtcagttgcagtggctaacgcctataatcccagcactttgggaggcggaagcggaaaggaagattgctcaagcccacaagttcaagatcagcctgagcaacatagtgagactctgtctctatttttaaaaagt-aaaaaaaGTAAG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81158828 150 - 96509753 CCCTggtcagttgcagtggctaacgcctataatcccagcactttgggaggcggaggcggaaaggaagattgctcaagcccacaagttcaagatcagcctgagcaacatagtgagactctgtctctatttttaaaaagt-aaaaaaaGTAAG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76414988 151 + 90941950 CCCTGGTCAGctgcagtggctaacgcctataatcccagcactttgggaggcggaggcgggaaggaagattgctcaagcccacaagttcaagatcagcctgagcaacatagtgagactctgtctctatttttaaaaagtaaaaaaaagtaag i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18683627 150 + 33263144 CCCTggtcagttgcagtggctaacgcctataatcccagcactttggcaggcggatgcggaaaggaagattgctcaagcccacaagttcaagatcagcctgagcaacatagtgagactctgtctctatttttaaaaagt-aaaaaaaGTAAG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198387185 141 + 210400635 CCCTAgccggatacagtggctgacacctataatcccatactttggggaggaggaggcaggaaggaagattgcttgagtccaagagttcaagaccagcttgagtaacatagtgagaccctgtctctaTTTTTAAAAAGT-AAA--------- i calJac3.chr1 C 0 C 0 e mm10.chr15 77213515 482 + 104043685 I e canFam3.chr10 41000382 0 - 69331447 C a score=397666.000000 s hg38.chr22_KI270876v1_alt 234335 119 + 263666 ATCTGCAGGAAGAGAAACAGAAAGTGTTCTCTTGGGTAAGGTGTATCTATTAAATCAGATGGCTAGGATAATTTA----------CAAGCAAAAAAATAAAGCTCTTTAA----GGGAGCGCCTAACAGGata s panTro4.chr22 34614512 119 + 49737984 ATCTGCAGGAAGAGAAACACAAAGTGTTCTCTTGGGTAAGGTGTATCTATTAAATCAGATGGCTAGGATAATTTA----------CAAGCAAAAAAATAAAGCTCTTTAA----GGGAGCGCCTAACAGGATA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31034171 119 + 46535552 ATCTGCAGGAAGAGAAACACAAAGTGTTCTCTTGGGTAAGGTGTATCTATTAAATCAGATGGCTAGGATAATTTA----------CAAGCAAAAAAATAAAGCTCTTTAA----GGGAGCGCCTAACAGGATA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100587678 119 - 115148730 ATCTCCAGGAAGAGAAACACGAAGTGTTCTCTTGGGTAAGGTGTATCTATTAAATCAGATGGCTAGGATAATTTA----------CAAGCAAAAAAATAAAGCTCTTTAA----GGGAGCACCTAACAGGata i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80732438 115 + 95678458 ATCTGCAGGAAGAGAAACACAAAGTGTTCTCTTGGGTAAGGTGTATCTATTAAATCAGATGGCTAGGATAATTTA----------CAAGCAAAA----AAAGCTCTTTAA----GGGAGCACCTAACAGGATA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81158978 115 - 96509753 ATCTGCAGGAAGAGAAACACAAAGTGTTCTCTTGGGTAAGGTGTATCTATTAAATCAGATGGCTAGGATAATTTA----------CAAGCAAAA----AAAGCTCTTTAA----GGGAGCACCTAACAGGatg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76415139 115 + 90941950 atCTGCAGGAAGAGAAACACAAAGTGTTCTCTTGGGTAAGGTGTATCTATTAAATCAGATGGCTAGGataattta----------caagcaaaa----aaagcTCTTTAA----GGGAGCACCTAACAGGata i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18683777 119 + 33263144 ATCTGCAGGAAGAGAAACACAAAGTATTCTCTTGGGTAAGGTGTATCTATTAAATCAGATGGCTAGGATAATTTA----------CAAGCAAAAAAATAAAGCTCTTTAA----GGGAGCACCTAACAGGata i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198387326 112 + 210400635 ATCTGCATGAAGAGAAACACAAAGTGCTCTGTTGGGTAAGAT-TGGGCATTAAATAAGATGGCTAGGA-----TA----------CAAGCAAAA-AATAAAGCTCTTTAA----GGGAGTGTCTAACAgtgtg i calJac3.chr1 C 0 C 0 s canFam3.chr10 41000382 130 - 69331447 ATCTGCAGGAAGAGAAACAAAAAGTGTTCCACTGGGCAGGATGTCCCTATTAAACCAGATGGCTAGGAGAATTTATGGAGACTATCAGGAAAAA---CAAAGCTCTTCAAAAGGGGGAGCTCCTAATAAGAGG i canFam3.chr10 C 0 C 0 e mm10.chr15 77213515 482 + 104043685 I a score=101588.000000 s hg38.chr22_KI270876v1_alt 234454 99 + 263666 tatatatcctgttatttctat--t-----------------------------gtgtgtgt----gtgtgtgtgtgtgtgt--------------gtgtatacatatataattatatcattataatatgtgtgtatatgtatgtgtgt s panTro4.chr22 34614631 95 + 49737984 TATATATCCTGTTATTTCTAT--T-----------------------------GTGTGTGT----GTGTGTGtatatatat------------------acatatgtataattatatcattataatatgtgtgtatatgtgtgtgtgt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31034290 63 + 46535552 TATATATCCTGTTATTTCTAT--t---------------------------------------------------------------------------atatatatata--------attataatatgtgtgtatatgtatgtgtgt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100587797 142 - 115148730 tatatatcctgttttttctat--tatatatatataattatatcattataatatgtgtgtat----atgtatgtgtgtatacatatatagatggagatatacatatatataactatatcattataatatgtgtgtatatgtatgtgtgt i nomLeu3.chr7b C 0 I 939 s rheMac3.chr10 80732553 70 + 95678458 TATATATCCTGTTATTTCTTT--t-------------------------------------------------------at------------------atatatataaaattatatcactata---tgtgtgtatatgtatgtgtgt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81159093 70 - 96509753 tatatatcctgttatttcttt--t-------------------------------------------------------at------------------atatatataaaattatatcactata---tgtgtgtatatgtatgtgtgt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76415254 70 + 90941950 tatatatcctgttatttcttt--t-------------------------------------------------------at------------------atatatataaaattatatcactata---tgtgtgtatatgtgtgtgtgt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18683896 58 + 33263144 tatatatcctgttatttcttttat-------------------------------------------------------at------------------atatatataaaattatatcactata-----------------tgtgtgt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198387438 94 + 210400635 tgtgtgtgtgtgtgtgtgtgt--g------------------------------tgtgtgtCCTGttatttatttatatat------------------atatatatataatCATAGTGATAT----tgtgtgtgtgtgtgtgcgtgt i calJac3.chr1 C 0 C 0 e mm10.chr15 77213515 482 + 104043685 I e canFam3.chr10 41000512 0 - 69331447 C a score=1305.000000 s hg38.chr22_KI270876v1_alt 234553 7 + 263666 gtgtgta s panTro4.chr22 34614726 7 + 49737984 gtgtata i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31034353 1 + 46535552 g------ i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100588878 7 - 115148730 gtgtgtg i nomLeu3.chr7b I 939 C 0 s calJac3.chr1 198387532 7 + 210400635 gtgtgta i calJac3.chr1 C 0 I 1031 e mm10.chr15 77213515 482 + 104043685 I e canFam3.chr10 41000512 0 - 69331447 C e rheMac3.chr10 80732623 0 + 95678458 C e papAnu2.chr10 76415324 0 + 90941950 C e macFas5.chr10 81159163 0 - 96509753 C e chlSab2.chr19 18683954 0 + 33263144 C a score=10393.000000 s hg38.chr22_KI270876v1_alt 234560 15 + 263666 tatatatatatagat s panTro4.chr22 34614733 15 + 49737984 tatatatatatagat i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31034354 13 + 46535552 --tatatatatagat i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100588885 15 - 115148730 tgtgtatacatatat i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80732623 9 + 95678458 -----atatataga- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81159163 9 - 96509753 -----atatataga- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76415324 9 + 90941950 -----atatatata- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18683954 9 + 33263144 -----atatatata- i chlSab2.chr19 C 0 C 0 e mm10.chr15 77213515 482 + 104043685 I e canFam3.chr10 41000512 0 - 69331447 C e calJac3.chr1 198387539 1031 + 210400635 I a score=978226.000000 s hg38.chr22_KI270876v1_alt 234575 431 + 263666 ggatagagatataccgatatatatat------------------------------------ggtttactcctacctggaatttctatg-------atatctataaatct-----------------------------------atat-aggtttatagatatagatatcat-aGAAATTCCAGGTGGGGATAAACCCAATATTGTAGTATCTATGTCATAGAAAGGC----TATGGGTAAAGATAAT-----------------------------------------------------TTTTTAACCTAATCAAAATTCTGCTCCTCCCTCAAACCAGGGATATTTA--CCTGATAATCACAAGCCAAAGGGAAAGAGAAAAGAAAATATCTGCCTGTCTAAGA-AAAGGGGAATGAGGAAGGGGTGGGCAGAGCTGGCTATAAAGGACGGGAATTTCTTTATGGAGGAAGGAGAAAATTGAATGCTGTACCATCTTCTTTTGCTGCTTTCAGGTGATGG-AGGAATCCCTAAGTCA-TTTACTTGCTCTAGTAGCGGGGCTGTGAAAG s panTro4.chr22 34614748 467 + 49737984 ggatagagatatacagatatatatatatatatagatggatagagatatacagatatatatatGGTTTACTCCTACCTGGAATTTCTATG-------ATATCTATAAATCT-----------------------------------ATAT-AGGTTTATAAATATAGATATCAT-AGAAATTCCAGGTGGGGATAAACCCAATATTGTAGTATCTATGTCATAGAAAGGC----TATGGGTAAAGATAAT-----------------------------------------------------TTTTTAACCTAATCCAAATTCTGCTCCTCCCTCAAACCAGGGATATCTA--CCTGATAATCACAAGCCAAAGGGAAAGAGAAAAGAAAATATCTGCCTGTCTGAGA-AAAGGGGAATGAGGAAGGGGTGGGCAGAGCTGGCTATAAAGGACGGGAATTTCTTTATGGAGGAAGGAGAAAATTGAATGCTGCACCATCTTCTTTTGCTGCTTTCAGGTGATGG-AGGAATCCCTAAGTCA-TTTACTTGCTCTAGTAGCGGGGCTGTGAAAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31034367 437 + 46535552 ggatagagatatacagatatatatat----------------------------------atGGTTTACTCCTACCTGGAATTTCTATG-------ATATCTATAAATCT-----------------------------------ATAT-ACGTTTATAGATATAGATATCAT-AGAAATTCCAGGTCGGGATAAACCCAATATTGTAGTATCTATGTCGTAGAAACGCTATGTATGGGTAAAGATAAT-----------------------------------------------------TTTTTAACCTAATCAAAATTCTGCTCCTCCCTCAAACCAGGGATACTTA--CCTGATAATCACAAGCCAAAGGGGGAGAGAAAAGAAAATATCTGCCTGTCTGAGA-AAAGGGGAATGAGGAAGGAGTGGGCAGAACTGGCTATAAAGGACGGGAATTTCTTTGTGGAGGAAGGAGAAAATTGACTGCTGCACCATCTTCTTTTGCTGCTTTCAGGTGATGG-AGGAATCCCTAAGTCA-TTTACTTGCTCTAGTAGCGGGGCTGTGAAAG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100588900 431 - 115148730 agatggagatatgcagatatatatat--------------------------------atatggtttactcctacctggaatttctatg-------atatctataagtct-----------------------------------atat-aggtttatagatatagatatCAC-AGAAATTCCAGGTAGGGATAAACCCAATATTGTAGTATCTATGTCATAGAAAGGC----TATGGGTAAAGATAAT-----------------------------------------------------TTTTTAACCTAATCAAAACTCTGCTCCTCCCTCAAACCAGGGATACTTA--CCTGATAATCACAAGCCAAAGGGAAAGAGAAAAGAAAATATCTGCCTG----AGA-AAAGGATAATGAGGAAGGGGTGGGCAGAGCTGGCTATAAAGGATGGGAATTTCTTTATGGAGGAAGGAGAAAATTCACTCCTGCACCATCTTCTTTTGCTGCTTTCATGTGATGG-AGAAATCCCTAAGTCA-TTTACTTGCTCTAGTAGCGGGGCTGTGAAAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80732632 469 + 95678458 -----gagatatacatatatatatat----------------------------------atGGTTTACTCCTACCTAGAGTTTCTACATAAATCTGTATGTAGAAATCTACATAGATTTATAGATACAGATTCTAATCTAC-AGATAT-AGATTTATAGATATAGATATCAT-AGAAATTCCACATAGGGATAAACCCAATATTGTAGTATCTATGTCATAGAAAGGC----TATGGGTAAAGATAAT-----------------------------------------------------TTTTTAACCTAATCAAAATTCTGCTCCTCCCTCAAACCAGGGATATTCA--CCTGACAATCACAAGCCAAAGGGAAAGAGAAAAGGCAGTATCTGCCTGTCTGAGA-AAATGGGCATGAGGAAGGGGTGGGCAGAGCTGGCTATAAACGATGGGAATTTCTTTATGGAGGAAGGAGACAACTGACTGCGGCACCACCTTCTTTTGTTGCTTTCAGGTAATGG-AGGAATCCCTAAGTCA-TTTACTTGCTCTAGTAGCAGGGCTGTGAAAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81159172 469 - 96509753 -----gagatatacatatatatatat----------------------------------atggtttactcctacctagagtttctacataaatctgtatgtagaaatctacatagatttatagatacagattctaatctac-agatat-agatttatagatatagatatcat-aGAAATTCCACACAGGGATAAACCCAATATTGTAGTATCTATGTCATAGAAAGGC----TATGGGTAAAGATAAT-----------------------------------------------------TTTTTAACCGAATCAAAATTCTGCTCCTCCCTCAAACCAGGGATATTTA--CCTGACAATCACAAGCCAAAGGGAAAGAGAAAAGGCAGTATCTGCCTGTCTGAGA-AAATGGGCATGAGGAAGGGGTGGGCAGAGCTGGCTATAAACGATGGGAATTTCTTTATGGAGGAAGGAGACAACTGACTGCGGCACCACCTTCTTTTGTTGCTTTCAGGTAATGG-AGGAATCCCTAAGTCA-TTTACTTGCTCTAGTAGCAGGGCTGTGAAAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76415333 460 + 90941950 -----gagatatacatatatatatat----------------------------------atggtttacTCCTACCTAGAGTTTCTACATAAATCTGTATGTAGAAATCTACatagatttatagatacaggttct----------atat-agatttatagatatagatatcat-agaAATTCCACATAGGGATAAACCCAATATTGTAGTATCTATGTCATAGAAAGGC----TATgggtaaagataat-----------------------------------------------------tttttaacctAATCAAAATTCTGCTCCTCCCTCAAACCAGGGATATTTA--CCTGACAATCACAAgccaaagggaaagagaaaaggcagTATCTGCCTGTCTGAGA-AAATGGGCATGAGGAAGGGGTGGGCAGAGCTGGCTATAAACGATGGGAATTTCTTTATGGAGGAAGGAGACAACTGACTGCGGCACCACCTTCTTTTGTTGCTTTCAGGTAATGG-AGGAATCCCTAAGTCA-TTTACTTGCTCTAGTAGCAGGGCTGTGAAAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18683963 460 + 33263144 -----gagatatac----atatatat----------------------------------atggtttactcctacctagagtttatatg-------atatctataaatccatgtagatttatagatacagattctaatctatgatatatgatatctatatctatagatatcat-aGAAATTCCACATAGGGATAAACCCAATATTGTAGTATCTATGTCATAGAAAGGC----TATGGGTAAAGATAAT-----------------------------------------------------TTTTTAACCTAATCAAAATTCTGCTCCTCCCTCAAACCAGGGATATTTA--CCTGACAATCACAAGCCTAAGGGAAAGAGAAAAGACAGTATCTGTCTGTCTGAGA-AAATGGGCATGAGGAAGGGGTGGGCAGAGCCGGCTATAAACGATGGGAATTTCTTTATGGAGGAAGGAGACAACTGACTGCGGCACCACCTTCTTTTGCTGCTTTCAGCTAATGG-AGGAATCCCTAAGTCA-TTTACTTGCTCTAGTAGCAGGGCTGTGAAAA i chlSab2.chr19 C 0 C 0 s canFam3.chr10 41000512 366 - 69331447 --------------------------------------------------------------------------------------------------------------------------------------------------------------------GGACAGTGTCAGGGGTTCCAAGTAGAGGTAAACCCAATA--------------CCAAAGAAAAGC----TTCAAGTAAAGGAGGTGGGTGTTTtttgttttggtttggtttggtttggttttggttttggtttgTGTGTTTTTATGCGCTTCAAAATTCCACCCCTTCCTTAAATTAGGTATACTTATCCCCAACAATCATAAACACAAGGAAAGAAGGAAAGGAAATACCTGCTGGTGCAGGAGAGAAGGAGATGAGGAGGAAGTGGAGATA-CTGGCTAGAAGGGATGAA--------TGTGGATG----------------GCCTCACCATCGTCTTTCATGACTTTCAGGCGATGGCAGGATTGTCTGAGTCACTTCACCTGCCTGAGGGACAAGGCTGTGAACA i canFam3.chr10 C 0 C 0 e mm10.chr15 77213515 482 + 104043685 I e calJac3.chr1 198387539 1031 + 210400635 I a score=1097241.000000 s hg38.chr22_KI270876v1_alt 235006 360 + 263666 AGGAGACAGTAATG-TTTGGTCCT-CCTACAGGGCAGGATTAAAAGCTGTGAAGGAGTTAA----------AGAA-TATCAGAGTGAAAATGCTGGCAGGACTTCTAGGGCCTTTTTAGCCAGCCTAGtggaatggaag--agtctgggca-ttagagccagatgggccttcct---taagtgaccttgggca---agctggacagcctctctagcctacacttttctcatctgtaaaattgggttaacagcatttgccctgcagagtcataagaatttaataaggtaacaaat-aaaaacaaactgcttcagaataggcactcaataCAGGTTAAATGCTTTTCCCCTAAACCTCAAGG--CTAGC----GATAAAACGCCACTGGAA-- s panTro4.chr22 34615215 360 + 49737984 AGGAGACAGTAATG-TTTGGTCCT-CCTACAGGGCAGGATTAAAAGCTGTGAAGGAGTTAA----------AGAA-TATCAGAGTGAAAATGCTGGCAGGACTTCTAGGGCCTTTTTAGCcagcctagtggaatggaag--agtctgggca-ttagagccagatgggccttcct---taagtgaccttgggca---agttggacagcctctctagcctacacttttctcatctgtaaaactgggttaacagcatttgccctgcagagtcataagaatttaataaggtaacaaat-aaaaacaaactgcttcagaataggcactcaataCAGGTTAAATGCTTTTCCCCTAAACCTCAAGG--CTAGC----GATAAAATGCCACTGGAA-- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31034804 360 + 46535552 AGGAGACAGTAATG-TTTGGTCCT-CCTACAGGGCAGGATTAAAAGCTGTGAAGGAGTTAA----------AGAA-TATTAGAGTGAAAATGCTGGCAGGACTTCCAGGGCCTTTTTAGCTGgcctagtggaatggaag--agtctgggca-ttagagccagatgggccttcct---taagtgaccttgggca---agttggacagcctctctagcctacacttttctcatctgtaaaactgggttaacagcatttgccctgcagagtcataagaatttaataaggtaacaaataaaaaacaaactgcttcagaacaggcactcaataCAGGTTAAATGCTTTTTCCCTAAACCTC-AGG--CTAGT----GATAAAACGCCACTGGAA-- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100589331 356 - 115148730 AGGAGACAGTAATGTTTTGGTCCTCCCTACAGGG--AGATTAAAAGCTGTGAAGGAGTTAA----------AGAATTATTAGAATGAAAATGCTGGCAGGAC-TCTAGGGCC-TTTTAGCcag-ctagtggaatggaag--agtctgggca-ttagagccagatggg-cttcct---taagtgaccttgggca---agttggacagcctctctag-ctacacttttctcatctgtaaaattgggttaacagcatttgccctgcagagtcataagaatttaataaggtaacaaataaaaaacaaactgcttcagaacaggcactcaataCAGGTTAAATGCTTTTCCCCTAAACCTC-AGG--CTAGC----GATAAAACGCCACTGGAA-- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80733101 367 + 95678458 AGGAGAGAGTAATG-TTTGGTCCT-CCTACAGGGCAGGACTAAAAGCTGTGAAGGAGTTAAAGCTTT---CAGAA-TATTAGAGTGAAAATGCTGGCAGGACTTCTAGGGCTTTTTTAGCcagcctagtggaatggaag--agtctgggca-ttagagccagatgggccttcctagctaagtgaccttgggca---agttggacagcctctctagcctacacttttctcatctatacaattgggttaacagcatttgccctgcagagtcataagaatttaataaggtaacaaat---aaacaaactgcttcagaataggcactcaataCAGGTTAAATGCTTTTCCCCTAAACCTC-AGG--CTAGC----GATAAAACGCCCCTGGAA-- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81159641 367 - 96509753 AGGAGAGAGTAATG-TTTGGTCCT-CCTACAGGGCAGGACTAAAAGCTGTGAAGGAGTTAAAGCTTT---CAGAA-TATTAGAGTGAAAATGCTGGCAGGACTTCTAGGGCTTTTTTAGCcagcctagtggaatggaag--agtctgggca-ttagagccagatgggccttcctagctaagtgaccttgggca---agttggacagcctctctagcctacacttttctcatctatacaattgggttaacagcatttgccctgcagagtcataagaatttaataaggtaacaaat---aaacaaactgcttcagaataggcactcaataCAGGTTAAATGCTTTTCCCCTAAACCTC-AGG--CTAGC----GATAAAACGCCCCTGGAA-- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76415793 367 + 90941950 AGGAGAGAGTAATG-TTTGGTCCT-CCTACAGGGCAGGACTAAAAGCTGTGAAGGAGTTAAAGCTTT---CAGAA-TATTAGAGTGAAAATGCTGGCAGGACTTCTAGGGCTTTTTTAGCCAGCCTAGTGGAATGGAAG--AGTCTGGGCA-TTAGAGCCAGATGGGCCTTCCTAGctaagtgaccttgggca---agttggaCAGCCTCTCTAGCCTACACTTTTCTCATCTATACAATTGGGTTAACGGCATTTGCCCTGCAGAGTCATAAGAATTTAATAAggtaacaaat---aaacaaactgcTTCAAAATAGGCACTCAATACAGGTTAAATGCTTTTCCCCTAAACCTC-AGG--CTAGC----GATAAAACGCCCCTGGAA-- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18684423 367 + 33263144 AGAAGAGAGTAATG-TTTGGTCCT-CCTACAGGGCAGGACTAAAAGCTGTGAAGGAGTTAAAGCTTT---CAGAA-TATTAGAGTGAAAATGCTGGCAGGACTTCTAGGGCTTTTTTAGCCAGCCTAGTGGAAAGGAAG--AGTCTGGGCA-TTACAGCCAGATGGGCcttcctagctaagtgaccttgggca---agttggacagcctctctagcctacacttttctcatctatacaattgggttaacagcatttgccctgcagagtcataagaatttaataaggtaacaaat---aaacaaactgcttcagaataggcactcaataCAGGTTAAATGCTTTTCCCCTAAACCTC-AGG--CTAGC----GATAAAACGCCCCTGGAA-- i chlSab2.chr19 C 0 C 0 s mm10.chr15 77213997 351 + 104043685 AGCAAGCAGTAATG-GC--------TCTTCAAGACAGGACTAAAAGCT----AGGAGTTCAAGCGTTCGGCAGTG-TACCAGAGTGAAATGGTTAGAAACACATCCAGGGCTTTCCCTGCCATCC-AGTGGAAT---CT--AGTCTGGGCAGTTAGAGCCAGATGGGCCTCCCTAGTAAAgtgaccttggggagtcagtcgaacagcctctctagccttcagttttctcatctataaaactgagtgagcagcatttgccctgctgagttgtgagaattT------TTAAAAAGT-------AAGCTGTTTCAGAATAGCCATCTACTATAGGTCAAATGCCCCCCCCCCCATTCTC-AGACCCTAGG----GATGAAACGCAGGTGGTT-- i mm10.chr15 I 482 C 0 s canFam3.chr10 41000878 353 - 69331447 GGAAGACAGCAGTG-TTTGGTCTT-CC-ACAGGACAGGGCTGAAAGCCACTAAGGAGTTAAAACTTT---CGGGG-CACGAGAATGAGAATGCTGGAAGGACTTCCAGGGCTTTTTTAGCcagcccagtggaatggaagaaagcctgggca-ttagagccagatggactttcctagct--ttgaccttgggca---aatcggacagcctccctagccttcactcttctcatctagaaaatcgagtgaatggtgtgtgccctgaagA--CAGCAGAGT--------GTAAAAAGC-------AAACTGCTTCAGGAGAGGCATGCAATACAGGTTAAATG-----TCCTCACACCTC-AGG--CTAGCCATACATAAAACACCAGTGGCTGG i canFam3.chr10 C 0 C 0 e calJac3.chr1 198387539 1031 + 210400635 I a score=4727741.000000 s hg38.chr22_KI270876v1_alt 235366 1230 + 263666 TATATAGTGATATACC-----ATACATGCCCATTTTCTC-CTTTTcctc------tcattgtgcataaagagaagcaagtctaaaaagagaaaataacttttccaaggttgcaatactagttactggcagaattggggctaaaagccagttccttcaagttcaatgcAATGTACCTCGCCTCATTAGGAACAATCCCTTAGGGA----------------------------TGGGCTCTGAGAGTAGATGCCAACAAGAAAACAAGCTAACTGCAATGTCTGCCATTCCCTGTGATTCAGATACCTAAGAGTTAAACATTCAGTCTCAGCTACAGCTCCGGAG---------TTGGCTGAC---TCCTT-----------------AGGCACTGAAATCCATTCCTCTACGTGATTGGTTGGTTCCCAAAGGGGTGGGGAAGAGGAAAAGGGAGAAGAATGTCACCCGATCCCCGGGGGTAAACA--ACAGCAAAAGCATC----TGCTCAGGTTTTCAACTAAATCTGTGAAATATTTCTGAACACT--TGACCACCAAACTTGAAAAACTGTTAACTTCTGACCTTAATCAA-----AAA------GGTTGTTCTGT--AATGACCAGATCCTTAGTAATGCAATCTGGA----CAAACAAATGC---AAAAAGACAGTTTAATATTTCTCTAGCACAAAATTAGTACCCAGTGCTCGTGTGCTCT-AGGTGCTTGAAATCGACACTGCCACCAACCCTCCT-CCCCCTTTGCCATTACAGAGAGAAACCAGCCTGCTTGCT------TCCACCCTACCATTTTACTCGAACTCTGCCATTTCGGAAATATGACAGGACTACACAATCACATTCTCTCCTCTGAG--------CCACCT--CCTTTAAGAGCAGCC-----------------------------------------------------------------------------------------------------CCATCCCCTTGTAA--------------------------CT-----TTCTGTAATTATGTTAGCACACATGTGCAGGGCAGAGAGAAGGGAGGGTTTGGGGAGAGAGAAACCCAATACCCTGCCAAATCCATTGGGAAGTCTGCCCAAGTTATTAATCCAGGACGGGGCCACTTAACTAAATTAGTTGAGGCAATGCCCTTCAATTGTAGCTAGATTCTTT-CCCCAGGGGAGAATGCAGGAAGTGTCTGCCTCCTCAAAATCTTATTACCCCAAACAACTCTTTTTTTCTTCAGAAGTTTCTCTCTCCCATTTCAAAGCTATGTACAAAATACTTTTGTTTTATGCAGAGAATC-AGAGAGGCAGCCGCTCTCCCTGAGTACACTACAGGGACTCCACACGACTGGTCAGTAAGGAGCTGCTGAAAAGTGCATT---CCCTTTGTTCTTA----CAGCCACAAT s panTro4.chr22 34615575 1230 + 49737984 TATATAGTGATATACC-----ATACATGCCCATTTTCTC-CTTTTcctc------tcattgtgcatcaagagaagcaagtctaaaaagagaaaataacttttccaaggttgcaatactagttactggcagaattggggctaaaagccagttccttcaagttcaatgcAATGTATCTCGCCTCATTAGGAACAATCCCTTAGGGA----------------------------TGGGCTCTGAGAGTAGATGCCAACAAGAAAACAAGCTAACTGCAATGTCTGCCATTCCCTGTGATTCAGATACCTAAGAGTTAAACATTCAGTCTCAGCTACGGCTCCGGAG---------TTGGCTGAC---TCCTT-----------------AGGCACTGAAATCCATTCCTCTATGTGATTGGTTGGTTCCCAAAGGGGTGGGGAAGAGGAAAAGGGAGAAGAATGTCACCCGATCCCCAGGGGTAAACA--ACAGCAAAAGCATC----TGCTCAGGTTTTCAACTAAATCTGTGAAATATTTCTGAACACT--TGACCACCAAACTTGAAAAACTGTTAACTTCTGACCTTAATCAA-----AAA------GGTTGTTCTGT--AATGACCAGATCCTTAGTAATGCAATCTGGA----CAAACAAATGC---AAAAAGACAGTTTAATATTTCTCTAGCACAAAATTAGTACCCAATGCTCGTGTGCTCT-AGGTGCTTGAAATCGACACTGCCACCAACCCTCCT-CCCCCTTTGCCATTACAGAGAGAAACCAGCCTGCTTGCT------TCCACCCTACCATTTTACTCGAACTCTGCCATTTCGGAAATATGACAGGACTACACAATCACATTCTCTCCTCTGAG--------CCACCT--CCTTTAAGAGCAGCC-----------------------------------------------------------------------------------------------------CCATCCCCTTGTAA--------------------------CT-----TTCTGTAATTATGTTAGCACACATGTGCAGGGCAGAGAGAAGGGAGGGTTTGGGGAGAGAGAAACCCAATACCCTGCCAAATCCATTGGGAAGTCTGCCCAAGTTATTAATCCAGGACGGGGCCACATAACTAAATTAGTTGAGGCAATGCCCTTCAATTGTAGCTAGATTCTTT-CCCCAGGGGAGAATGCAGGAAGCGTCTGCCTCCTCAAAATCTTATTACCCCAAACAACTCTTTTTTTCTTCAGAAGTTTCTCTCTCCCATTTCAAAGCTATATACAAAATACTTTTGTTTTATGCAGAGAATC-AGAGAGGCAGCGGCTCTCCCTGAGTACACTACAGGGACTCCACACGACTGGTCAGTAAGGAGCTGCTGAAAAGTGCACT---CCCTTTGTTCTTA----CAGCCACAAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31035164 1230 + 46535552 TATATAGTGATATACC-----ATACATGCCCATTTTCTC-CTTTTcctc------tcattgtgcataaagagaagcaagtccaaaaagagaaaataacttttccaaggttgcaatactagttactggcagaattggggctaaaagccagttccttcaagttcaatgcaatgtactttgcctcattaggAACAATCCCTTAGGGA----------------------------TGGGCTCTGAGAGTAGATGCCAACAAGAAAACAAGCTAACTGCAATGTCTGCCATTCCCTGTGATTCAGATACCTAAGAGTTAAACATTCAGTCTCAGCTAGGGCTCTGGAG---------TTGGCTGAC---TCCTT-----------------AGGCACTGAAATCCATTCCTCTATGTCATTGGTTGGTTCCCCAAGGGGTGGGGAAGAGGAAAAGGGAGAAGAATGTCACCCGATCCCCAGGGGTAAACA--ACAGCAAAAGCATC----TGCTCAGGTTTTCAACTAAATCTGTGAAATATTTCTGAACACT--TGACCACCAAACTTGAAAAACTGTTAATTTCTGACCTTAATCAA-----AAA------GGTTGTTCTGT--AATGACCAGATCCTTAGTAATGCAATCTGGA----CAAACAAATGC---AAAAGGACAGTTTAATATTTCTCTAGCACAAAATTAGTACCCAATGCTCGTGTGCTCT-AGGTGCTTGAAATCAGCACTGCCACCAACCCTCCT-CCCCCTTTGCCATTACAGAGAGAAACCAGCCTGCTTGCT------TCCACCCTACCATTTTACTCGAACTCTGCCATTTCAGAAATATGACAGGACTACACAATCACATTCTCTCGTCTGAG--------CCACCT--CCTTTAAGAGGAGCC-----------------------------------------------------------------------------------------------------CCATCCCCTTGTAA--------------------------CT-----TTCTGTAATTATGTTAGCACACATGTGCAGGGCAGAGAGAAGGGAGGGTTTGGGGAGAGAGAAACCCGATACCCTGCCAAATCCATTGGGATGTCTGCCCAAGTTATTAATCCAGGACGGGGCCACTTAACTAAATTAGTTGAGGCAATGCCCTTCAATCGTAGCTAGATTCTTT-CCCCAGGGGAGAATGCAGGAAGGGTCTGCCTCCTCAAAATCTTATTACCCCAAACAACTCTTTTTTTCTTCAGAAGTTTGTCTCTCCCATTTCAAAGCTATATACAAAATACTTTTGTTTCATGCAGAGAATC-AGAGAGGCAGCCGCTCTCCCTGAGTACACTACAGGGACTCCACATAACTGGTCAGTAAGGAGCTGCTGAAAAGTGCATT---CCCTTTGTTCTTA----CAGCCACAGT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100589687 1222 - 115148730 CATACAGTGATATACC-----ATACATGCCCATTTTCTC-CTTTTcctc------tcattgtgcataaagagaagcaagtccaaaaagagaaaataacttttccaaggttgcaatactagttactggcagaattggggctaaaagccagttccttcaagttcaatgcAATGTACCTCGCCTCATTAGGAACAATCCCTTAGGGA----------------------------TTGGCTCTGAGAGTAGATGC--------AAACAAGCTAACTGCAATGTCTGCCATTTCCTGTGATTCAGATACCTAAGAGTTAAACATTCAGTCTCAGCTAGGGCCCCGGAG---------TTGGCTGAC---TCCTT-----------------AGGCACTGAAATCCATTCCTCTATGTGATTGGTTGGTTCCCAAAGGGGTGGGGAAGAGGAAAAGGGAGAAGAATGTCACCCGATCCCCAGGGGTAAACA--ACAGCAAAAGCATC----TGCTCAGGTTTTCAACTAAATCTGTGAAATACTTCTGAACACT--TGACCACCAAACTTGAAAAACTGTTAACTTCTGACCTTAATCAA-----AAA------GGTTGTTCTGT--AATGACCAGATCCTTAGTAATGCAATCTGGA----CAAACAAATGC---AAAAGGACAGTTTAATATTTCTCTAGCACAAAATTAGTACCCAATGCTCGTGTGCTCT-AGGTGCTTGAAATCGACACTGCCACCAACCCTCCT-CCCCCTTTGCCATTACAGAGAGAAACCAGCCTGCTTGCT------TCCACCCTACCATTTTACTCGAACTCTGCCATTTCGGAAATATGACAGGACTACACAATCACATTCTGTCCTCTGAG--------CCACCT--CCTTTAAGAGGAGCC-----------------------------------------------------------------------------------------------------CCATCCCCTTGTAA--------------------------CT-----TTCTGTAATTATGTTAGCACACATGTGCAGGGCAGAGAGAAGGGAGGGTTTGGGGAGAGAGAAACCCAATACCCTGCCAAATCCATTGGGAAGTCTGCCCAAGTTATTAATCCAGGACGGGGCCACTTAACTAAATTAGTTGAGGCAATGCCCTTCAATCGTAGCTAGATTCTTT-CCCCAGGGGAGAACGCAGGAAGGGTCTGCCTCCTCAAAATCTTATTACCCCAAACAACTCTTTTTTTCTTCAGAAGTTTCTCTCTCCCATTTCAAAGCTATATACAAAATACTTTTGTTTTATGCAGAGAATC-AAAGAGGCAGCCGCTCTCCCTGAGTACACTACAGGGACTCCACATGACTGGTCAGTAAGGAGCTGCTGAAAAGTGCATT---CCCTTTGTTCTTA----CAGCTACAAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80733468 1227 + 95678458 TATATAGTGATATACC-----ATACATGCTCATTTTCTC-CTTTTCCTC-------CACT-TGCataaagagaagcaagtccaaaaagagaaaacagcttttccgaggttgcaatactagttactggcagaactggggctaaaagccagttccttcaagttcagtgcaatgtaccttgcctcATTAGGAACAATCCCTTAGGGA----------------------------TGGGCTCTGAGAGTAGATGCAAACAAGAAAACAAGCTAACCGCAATGTCCGCCATTCCCTGTGATTCAGATACCTAAGAGTT-AACGTTCAGTCTCAGCTAGGGCTCCGGAG---------TTGGCTGAC---TCCTT-----------------AGGCACTGAAATCCATTCCTCCATGTGATTGGTTGGTTCCCAAAGGGGTGGGGAAGAGGAAAAGGGAGAAGAATGTCACCCGATCCCCAGGGGTAAACA--ACAGCAAAAACATC----TGCTCAGGTTTTTAACTAAATCTGTGAAATATTTCTGAACACT--TGACCACCAAACTTGAAAAACTGTTAACTTCTGACCTTAATCAA-----AAA------GGTTGTTCTGT--AATGACCAGATCCTTAGTAATGCAATCTGGA----CAAACAAATGC---AAAAGGACAGTTTAATATTTCTCTAGCACAAAATTAGTACCCAATGCTCGTGTGTTCT-AGGTGCTTGAAATCGACACTGCCACCAACCCTCCT-CCCCCTTTGCCATTACAGAGAGAAACCAGCCTGCCTGCT------TCCACCCTACCATTTTACTCGAACTCTGCCATTTCGGAAACATGACAGGACTACGCAATCACATTCTCTCCTCTGAG--------CCACCT--CCTTTAAGAGGAGCC-----------------------------------------------------------------------------------------------------CCATCCCCTTGTAA--------------------------CT-----CTCTGTAATTATGTTAGCACACATGTGCAGGGCAGAGAGAAGGGAAGGTTTGGGGAGGAAGAAACCCAATACCCTGCCAAATCCATTGGGAAGTCTGCCCAAGTTATTAATCCAGGATGGGGCCACTTAACTAAATTAGTTGAGGCAATGCCCTTCAATCCTAGCTAGATTCTTT-CCCCAGGGGATAATGCAGGAAGGGTCTGCCTCCTCAAAATCTTATTACCCCAAACAACTCTTTTTTTCTTCAGAAGTTTCTCTCTCCCATTTCAAAGCTATAAACAAAATACTTTGGTTTTATGCAGAGAATC-AGAGAGGCAGCTGCTCTCCCTGAGTACACTACAGGGACTCCACATGACTGGTCAGTAAGGAGCTGCTGAAAAGTGCATT---CCCTTTGTTCTTA----CAGCCACAAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81160008 1227 - 96509753 TATATAGTGATATACC-----ATACATGCTCATTTTCtc-cttttcctc-------cact-tgcataaagagaagcaagtccaaaaagagaaaacaacttttccgaggttgcaatactagttactggcagaactggggctaaaagccagttccttcaagttcagtgcaatgTACCTTGCCTCATTAGGAACAATCCCTTAGGGA----------------------------TGGGCTCTGAGAGTAGATGCAAACAAGAAAACAAGCTAACCGCAATGTCCGCCATTCCCTGTGATTCAGATACCTAAGAGTT-AACGTTCAGTCTCAGCTAGGGCTCCGGAG---------TTGGCTGAC---TCCTT-----------------AGGCACTGAAATCCATTCCTCCATGTGATTGGTTGGTTCCCAAAGGGGTGGGGAAGAGGAAAAGGGAGAAGAATGTCACCCGATCCCCAGGGGTAAACA--ACAGCAAAAACATC----TGCTCAGGTTTTTAACTAAATCTGTGAAATATTTCTGAACACT--TGACCACCAAACTTGAAAAACTGTTAACTTCTGACCTTAATCAA-----AAA------GGTTGTTCTGT--AATGACCAGATCCTTAGTAATGCAATCTGGA----CAAACAAATGC---AAAAGGACAGTTTAATATTTCTCTAGCACAAAATTAGTACCCAATGCTCGTGTGCTCT-AGGTGCTTGAAATCGACACTGCCACCAACCCTCCT-CCCCCTTTGCCATTACAGAGAGAAACCAGCCTGCCTGCT------TCCACCCTACCATTTTACTCGAACTCTGCCATTTCGGAAACATGACAGGACTACACAATCACATTCTCTCCTCTGAG--------CCACCT--CCTTTAAGAGGAGCC-----------------------------------------------------------------------------------------------------CCATCCCCTTGTAA--------------------------CT-----CTCTGTAATTATGTTAGCACACATGTGCAGGGCAGAGAGAAGGGAAGGTTTGGGGAGGAAGAAACCCAATACCCTGCCAAATCCATTGGGAAGTCTGCCCAAGTTATTAATCCAGGATGGGGCCACTTAACTAAATTAGTTGAGGCAATGCCCTTCAATCCTAGCTAGATTCTTT-CCCCAGGGGATAATGCAGGAAGGGTCTGCCTCCTCAAAATCTTATTACCCCAAACAACTCTTTTTTTCTTCAGAAGTTTCTCTCTCCCATTTCAAAGCTATAAACAAAATACTTTGGTTTTATGCAGAGAATC-AGAGAGGCAGCTGCTCTCCCTGAGTACACTACAGGGACTCCACATGACTGGTCAGTAAGGAGCTGCTGAAAAGTGCATT---CCCTTTGTTCTTA----CAGCCACAAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76416160 1228 + 90941950 TATATAGTGATATACC-----ATACATGCTCATTTTCTC-CTTTGCCTC-------CACT-TGCATAAAGAGAAGCAAgtccaaaaagagaaaacaactttTCCGAGGTTGCAATACTAGTTACTGGCAGAACTGGGGCTAAAAGCCAGTTCCTTCAAGTTCAGTGCAATGTACCTTGCCTCATTAGGAACAATCCCTTAGGGA----------------------------TGGGCTCTGAGAGTAGatgcaaacaagaaaacaagCTAACCGCAATGTCCGCCATTCCCTGTGATTCAGATACCTAAGAGTTAAACGTTCAGTCTCAGCTAGGGCTCCGGAG---------TTGGCTGAC---TCCTT-----------------AGGCACTGAAATCCATTCCTCTATGTGATTGGTTGTTTCCCAAAGGGGtggggaagaggaaaagggagaagaatgtCACCCGATCCCCAGGggtaaaca--acagcaaaaacatc----TGCTCAGGTTTTCAACTAAATCTGTGAAATATTTCTGAACACT--TGACCACCAAACTTGAAAAACTGTTAACTTCTGACCTTAATCAA-----AAA------GGTTGTTCTGT--AATGACCAGATCCTTAGTAATGCAATCTgga----caaacaaatgc---aaaaggaCAGTTTAATATTTCTCTAGCACAAAATTAGTACCCAATGCTCGTGTGCTCT-AGGTGCTTGAAATCGGCACTGCCACCAACCCTCCT-CCCCCTTTGCCATTACAGAGAGAAACCAGCCTGCCTGCT------TCCACCCTACCATTTTACTCGAACTCTGCCATTTCGGAAACATGACAGGACTACACAATCACATTCTCTCCTCTGAG--------CCACCT--CCTTTAAGAGGAGCC-----------------------------------------------------------------------------------------------------CCATCCCCTTGTAA--------------------------CT-----CTCTGTAATTATGTTAGCACACATGTGcagggcagagagaagggaaggttTGGGGAGGAAGAAACCCAATACCCTGCCAAATCCATTGGGAAGTCTGCCCAAGTTATTAATCCAGGATGGGGCCACTTAACTAAATTAGTTGAGGCAATGCCCTTCAATCCTAGCTAGATTCTTT-CCCCAGGGGATAATGCAGGAAGGGTCTGCCTCCTCAAAATCTTATTACCCCAaacaactctttttttcttcagaagtTTCTCTCTCCCATTTCAAAGCTATAAACAAAATACTTTGGTTTTATGCAGAGAATC-AGAGAGGCAGCTGCTCTCCCTGAGTACACTACAGGGACTCCACATGACTGGTCAGTAAGGAGCTGCTGAAAAGTGCATT---CCCTTTGTTCTTA----CAGCCACAAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18684790 1226 + 33263144 TATATAGTGATATACC-----ATACATGCTCATTTTCTC-CTTTTCCTC-------CACT-TGCat--agagaagcaagtccaaaaagagaaaacaacttttccggggttgcaatactagttactggcagaactggggctaaaagccagttccttcaagttcagtgcAATGTACCTTGCCTCATTAGGAACAATCCCTTAGGGA----------------------------TGGGCTCTGAGAGTAGATGCAAACAAGAAAACAAGCTAACCGCAATGTCCGCCATTCCCTGTGATTCAGATACCTAAGAGTTAAACGTTCAGCCTCAGCTACGGCTCCGGAG---------TTGGCTGAC---TCCTT-----------------AGGCACTGAAATCCATTCTTCTATGTGATTGGTTGGTTCCCAAAGGGGTGGGGAAGAGGAAAAGGGAGAAGAATGTCACCCGATCCCCAGGGGTAAACA--ACAGCAAAAACATC----TGCTCAGGTTTTCAACTAAATCTGTGAAATATTTCTGAACACT--TGACCACCAAACTTGAAAAACTGTTAACTTCTGACCTTAATCAA-----AAA------GGTTGTTCTGT--AAGGACCAGATCCTTAGTAATGCAATCTGGA----CAAACAAATGC---AAAAGGACAGTTTAATATTTCTCTAGCACAAAATTAGTACCCAATGCTCGTGTGCTCT-AGGTGCTTGAAATCGACACTGCCACCAACCCTCCT-CCCCCTTTGCCATTACAGAGAGAAACCAGCCTGCCTGCT------TCCACCCTACCATTTTACTCGAACTCTGCCATTTCGGAAACATGACAGGACTACACAATCACATTCTCTCCTCTGAG--------CCACCT--CCTTTAAGAGGAGCC-----------------------------------------------------------------------------------------------------CCATCCCCTTGTAA--------------------------CT-----CTCTGTAATTATGTTAGCACACATGTGCAGGGCAGAGAGAAGGGAAGGTTTGGGGAGGAAGAAACCCAATACCCTGCCAAATCCATTGGGAAGTCTGCCCAAGTTATTAATCCAGGATGGGGCCACTTAACTAAATTAGATGAGGCAATGCCCTTCAATCCTAGCTAGATTCTTT-CCCCAGGGGATAATGCAGGAAGGGTCTGCCTCCTCAAAATCTTATTACCCCAAACAACTCTTTTTTTCTTCAGAAGTTTCTCTCTCCCATTTCAAAGCTATAAACAAAATACTTTGGTTTTATGCAGAGAATC-AGAGAGGCAGCTGCTCTCCCTGAGTACACTGCAGGGACTCCACATGACTGGTCAGTAAGGAGCTGCTGAAAAGTGCATT---CCCTTTGTTCTTA----CAGCCACAAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198388570 1240 + 210400635 tatatatctatatatctatatatatatatCCATTTTCTC-CTTTCCCTTtccctatcattgtgcataaagagaatcaagtccaaaaagagaaaataacttttccaaggttacgatactagttactggaagacctggggctaaaaaccagttccttcaagttcaatgcaatgcaccttgcctcAATTGGAACAATCCCTTAGGGA----------------------------TGGGCTCTGAGAGGAGATGCAAACAAGAAAACAAGCTAACTGCAAGGTCCGCCATTCCCTGTGATTCAGATACCTAAGAGTTAAACATTCAGTCTCAGCTAAGGCTCCGGAA---------TTGGCTGAC---TCCTT-----------------AGGCACTGAAATCCATTCCTTTACGTGATTGGTTGGTTCCCAAAGGGGTGGGGAAGAGGAAAAGGGAGAGGAATGTCACCCGATCCCCACGGGTAAACA--ACAGCAAGAGCATC----TGCTCAGGTTTTCAACTAAATCTGTGAAATATTTCTTAACACT--TGACCACCAAACTTGAAAAACTA-TAATTTTTGACCTCAATCAA-----AAA------GGTTGTTGTGT--AATGACTAGATCCTTAGTAATGCAACGTGGA----CAAATAAATGC---AAAAGGACTGTTTAATATTTCTCTAGCACAAAATCAGTACCCAATGCT-GTGTGCTCTAAGGCGCTTGAAATCGACACCGCCACCAACCCTCCT-CCCCGCTGACCATTACAGAGAAAAACCAGCCTGCTTGCT------TCTTTCCTACCATTTCACTCAAACTCTGCCATTTCAGAAACATGACAGGACTACACAATCACATTCTCTCCTCTGAG--------CCACAT--CCTTTAAGAGAAGCC-----------------------------------------------------------------------------------------------------CCATCGTCTTGTAA--------------------------CT-----CTCTGTAATTATGTTAGCACACATGTGCAGGGCAGAGAGAAGGGAGGGTTTGGAGAGAGAGAAACCCAATACCCTGCCAAATCCATTGGGAAGTCTGCCCAAGTTATTAATCCAGGACGGGGCCACTTAACTAAATTAGTTGAGGCAATGCCCTTCAATCCTAGCTAGATTCTTT-CCCCAGGGGCAAATGCAGAAAGGGTCTGCCTCCTCAAAATCTTATTATCCCAAACAACTGTTTTTTTCTTCAGAAGTTTCTCTCTCCCATTTCAAAGCTATATATAAAATACTTCTGTTTTATGCAGAGAATC-AGAGAGGTAGCCGCTCTCCCTGAGTACACTACAGGGACTCCACATGACTGGTCAGTAAGGAGCTGCTGAAAAGTGCATT---CCCTTTGTTCTTA----CAACCACAAC i calJac3.chr1 I 1031 I 287 s mm10.chr15 77214348 1182 + 104043685 TGTACCAGACTATGCC-----ATA-ATCCTCCTCCTGTCTCTTTTCTTCCCCCTCTCATTTTGCAGAATAAGGCACCAAACCCAAGAAGGCGAGCGAGCTTTCCAAAGGTGC--CACTGCTTGGTGGCCGGGTATGAGCTGAAG--CAGCTCCTTCTCACTCAGTG-ACTGCAC---ACATCGT----------------GGGG----------------------------TGG---CTCAGAGTCAGTAC-------------------------TGTTGTCCCTT--CTGTGACTCAGACACCCAAGAGTTAAACACTCAGCCTTAGT---AGGTCTTGAG---------GTGCCAGGCAGGGCCTTATGGGGAGAGGCT--GGAAGCACTGAAATCCATCCCTCCTTGTGATTGGTTGATTCCCAAAGGGGTGGG---AAGAAGAAGAGAAAAGATTGCCA-TGGATCCC--ACAATAAACA--ACAGCAGGAGCCTCTATATGCTCAGGTTTTCCAGTAAATCTATGCCATATTTCTAAATACTTGTGACCACCCAACTCTAGAAA-TGGTAACTTCTGACCTTCATCAAAAACTAAA------GTTTCTGCTATTGAAGGACTAAATTCCTAAGAGTACAGCTGGGA----TGACCGCATGCTTATTAAGGACAGTCTCATGTTTCCACAGTGC----------CCCCGCACTC--AAGCTCT--GGAGCTGAAAGCTGACACCGCCACCA-------T-CCCCCTT----------------ACTCAGCCTGTTTAAC------TCTGT----TCATTTTTCC---GCTCTGTCATCTTGGAAACATGACTTGGCTACTCAGTCCCATTCCCTCCTCTGAT--------TTGTCTACTCTTTAAGAAAGATCTTATCaagaaagacaggaaaaaagaaaggaaagaaaaaggagaaaggaaatgagtaaagaaagaaTAGTAGATAGGTAGATTGACTGATTTTGAAAGAAATCTATCTCATTGCAA--------------------------GTTCTAACTCTGCAGTTATGTTAGGACACACAAGCTGA--------------------AGGAAGAGAGAAACCTAATACCATGCTAAATCCTTTGGGAGGTCTGCCCAAGTCCTTAAGCCAGGCTGGGGCCACTTATCTGAATTAGCTGAGGTGGTGCCCTTCAGTCCTGGCTACATTCTCT-CCCCAGG-------------------------------------------------------------------ACTTTCTCCGTCCCATTCCAAA-CTTTACAGGAAGTGTATCTGTTCTCTGACGGGAACT-GGAGCAGCATTTGTTCTGCCTT-GCAGCTGACAAGGACTCCACATG-CTAA-CAGCAAGGAGCCACAGAAAACAGCTCTGTGTCCTTGGTACCTA----CA-CAGCAGC i mm10.chr15 C 0 I 1 s canFam3.chr10 41001231 1336 - 69331447 CATATATCGCCGTGTC-----ACAAAGGTTCATTCTCCCCCCTTTCctt----tctaacttagcagaaagggaatcaagtccaagcagggaaagtaactttcccaaggttacactgctggttactggcagaattaaggcttaaaatcagcttctgcaagctcaatgcATTGTAGTCTGCCTCATTAGGAACATTCCCTTGAGGACACAGCAAGCTTTTAGCTTAACACTACCTGAGCTCAGAGACTCCATGTGAACTAGGAAACAAGCTGACTGCAAGGTCAGCAGCTCCCTGTGATTTAGACACACAAGAGTTAAGCACTCAGCCTCAGCCAAGGCTCCAGAGCGCCTGGGCTGGGTGGAC---TCCTA-TGGGAGGAGGCCAGAGAGGCAGTGAAATCCACTCCTCGCTGTGATTGGTTGGTTCCCAAAGGGGTGGGGAAGAG-AAAAGGGGGAAGAATGTCACCCGATCCCCACGGGTAAACAAGAAAGCAGGAGCATC----TGCTCAGGTTTTCAACTAAATCTGTAAAATATTTCTGAACACT--TGGCCACCAAATTCAGAAGGCTG-TAACCTCTGACCTTCGTGAA-----CAACGGAGTGCTTGTTCTTT--AATGACCAAATTCTTAGTAATACAATCTGGAGGAGCGAGTGAATGC---AAAAAGGCAGTTTAATACTAGTCTAGCACAAAATTAGTAAGGAACGCTC--CTGCTCT-AGGTGCTTGAAATCAACACCGCCACCATTCTGCCTGCCCCCCCTGCCCTTACAGCGGGGAACCAGCCAGCCTGCTGGCCTCTCCACAGTACCATTTTTCTCAAAGTCCGCCATTCCAAAAACATGACTAGACTACACAATCACATTCCCTGCCCTGAGTTTCTCCCCCATCC--TCTTTAGGAGGAGGT-----------------------------------------------------------------------------------------------------CCCTCCTTTTTAAAAAGGAGATCTTATTGCAAGATGCAACCT-----CTCTGTAATTATGTTAGCACACATGTGCAGAGCAGAGAGAAGGGAGGGCTTGGGGAGAGAGAAACCCAATACTTTGCCAAATCCATTGGGAAGTCTGCCCAAGATATTAATCCAGGACGGGGCCACTTAACTGAATTGGTTGAGGCAATGCCCTTCAATCCTGGCTACATTCTTTCCCCCAGGGGAGAGTACAGCAAAGGCCTGTCTCCTCAAAATCTTATGACCCC-AACAACTC-CTGTTTCCTCACAAGTTTCTCTCT--CATTTCAAGGGTATACACAAAATATAACTGTTTTGAGCAGAGAATTAAAAGAGCCAATCACTCTCTCC-AGTATTCTATGGGGACTCCATAGGACTGGTTATTGAAGAGCCAAAGAAAACTGCATT---CCCTCTGTTCTCACCCTCAGCCACAAA i canFam3.chr10 C 0 C 0 a score=2405628.000000 s hg38.chr22_KI270876v1_alt 236596 669 + 263666 ----GAA----ATTTTAAAGTCCCAATTATGTAAACCAGGGTGAGGGATGAAGAGCTACAGTTAAACCAAAGAGAAAGCCTCCTGCAGAATGACTAAACCTGGAAGTCCTTTTACAGTCTCAACCAGTACATGAATCAGCTCTAGTTCACCTTAATACGGCACCAGAAACGAGGAGTAAGCCATACCCTCTCCCAGGCCCACCCT--------AAACA--ATCTGGAATTGCTGGACAGATC-ATCTCTCAGAAACTGTGTAGACTACAAATGACCC-AAAACCACTCTACACTCACTCAAAGAGGAAAGATTCCTCAATACTGAGCACAAGCAAATCAGCTCCAGGAAGTTAAGTGGCAGAGGCTCCGTATGCCTCCTCTTTGTCTCTATTCTTTAATCCCAAAGCCAGATTTAATCTAAATCATGTTACTAATGCCCTGTGCTAACACAGATGTCTCATTTATAAATCCTAGGGAACATAAGTGACTTAGCTCTC-TTTCACAGTAATGCTCAGCAAATTAACTACTCAAGgaggtt--cagtatggttactaaaaacataggcttcggtatcaagctaacctagatttaaatgcctgttctaccactttccagctctgtgacttgctcttctctaaagcccagtttcttcattggtaaaatatggcttctactgtccaccttatagaga s panTro4.chr22 34616805 669 + 49737984 ----GAA----ATTTTAAAGTCCCAATTATGTAAACCAGGGTGAGGGATGAAGAACTACAGTTAAACCAAAGAGAAAGCCTCCTGCAGAATGACTAAACCTGGAAGTCCTTTTACAATCTCAAGCAGTACAGGAATCAGCTCTAGTTCACCTTAATACGGCACCAGAAACGAGGAGTAAGCCATACCCTCTCCCAGGCCCACCCT--------AAACA--ATCTGGAATTGCTGGACAGATC-ATCTCTCAGAAACTGTGTAGACTACAAATGACCC-CAAACCACTCTACACTCACTCAAAGAGGAAAGATTCCTCAATACTGAGCACAAGCAAATCAGCTCCAGGAAGTTAAGTGGCAGAGGCTCCTTATGCCTCCTCTTTGTCTCTATTCTTTAATCCCAAAGCCAGATTTAATCTAAATCATGTTACTAATGCCCTTTGCTAACACAGATGTCTCATTTATAAATCCTAGGGAACATAAGTGACTTAGCTCTC-TTTCACAGTAATGCTCAGCAAATTAACTACTCAAGgaggtt--cagtatggttactaaaaacataggcttcggtatcaagctaacctagatttaaatgcctgttctaccactttccagctctgtgacttgctcttctctaaagcccagtttcttcattggtaaaatatggcttctactgtccaccttatagaga i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31036394 669 + 46535552 ----GAA----ATTTTAAAGTCCCAATTATGTAAACCAGGGTGAGGGATGAAGAACTACAGTTAAACCAAAGAGAAAGCCTCCTGCGGAATGACTAAACCTGGAAGTCCTTTTACAACCTCAACCAATACAGGAATCAGCTCTAGTTCACCTTAATACGGCACCGGAAACGAGGAGTAAGCCATACCCTCTCCCAGGCCCACCCT--------AAACA--ATCTGGAATTGCTGGACAGATC-ATCTCTCAGAAACTGTGTAGACTACAAATGACCC-AAAACCGCTCTACACTCACTCAAAGAGGAAAGATTCCTCAATACTGAGCACAAGCAAATCAGCTCCAGGAAGTTAAGTGGCAGAGGCTCCTTATGTCTCCTCTTTGTCTCTGTTCTTTAATCCCAAAGCCAAATTTAATCTAAATCATGTTACTAATGCCCTGTGCTAACACAGACGTCTCATTTATAAATCCTAGGGAACATAAGTGACTTAGCTCTC-TTTCACAGTAATGCTCAGCAAATTAACTACTCAAGgaggtt--cagtatggttactaaaaacataggcttagatatcaagctaacctagatttaaatgcctgttctaccactttccagctctgtggcttgctcttctctaaagcccagtttcttcactggtaaaatatggcttctactgtccaccttatagagA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100590909 669 - 115148730 ----GAA----ATTTTAAAGTCCCAATTATGTAAACTAGGGTGAGGGATGAAGAACTACAGTTAAACCAAAGAGAAAGCCTCCTGCAGAATGACTAAAACCTGAAGTCCTTTTACCACCTCAACCAGTACAGGAATCAGCTCTAGTTCATCTTAATACAGCACCAGAAACAAGGAGTAAGCCATACCGTCTCCCATGCCCACCCT--------GAACA--ATCTGGAATTGCTGGACAGATC-ATCTCTCAGAAACCGTGTAGACTACAAATGACCC-AAAACCACTCTACACTCACTCAAAGAGGAAAGATTCCTCAATACTGAGCACAAGCAAATCAGCTCCAGGAAGTTAAGTGGCAAAGGCTCCTTATGTCTCCTCTTTGTCTCTATTCTTTAATCCCAAAGCCAAATTTAATCTAAATCATGTTACTAATGCCCTGTGCTAACATAGATGTCTCATTTATAAATCCTAGGGAACATAAGTGACTTAGCTCTC-TTTCACAGTAATGCTCAGCAAATTAACTACTCAAGgaggtt--cagtatggttactaaaaacataggcttcggtatcaagctaacctagatttaaatgcctgttctaccactttccagctctgtgacttgctctcctctaaagcccagtttcttcactggtaaaatatggcttctactgtccaccttacagagA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80734695 667 + 95678458 ----GAA----ATTTTAAAGTCCCAATTATGTAAACCAGGGTGAGGGATGAAGAACTACAGTTAAACCAAAGAGAAAGCCTCCTGCGGAATGACTAAAACTTGAAGTCCTTTTACAACCTCAGCCAGTACAGGAATCAGCTCTAGTTCACCTTAATATGGC-CCAGAAAGCAGGAGTAAGCCACACCTTCTCCCAGGCCCATCCT--------AAATA--ATCTGGAATTGCCAGACAGATC-ATCTCTCAGAAACTGTGTAGACTACAAATGACCC-AAAACCACTCTACACTCACTCAAAGAGGAAAGATTCCTCAATACTGAACACAAGCAAATCAGC-CCAGGAAGTTAAGTGGCAGAGGCTCCTTATGTCTCCTCTTTGTCTCTATTCTTTAATCCCAAAGCCAAATTTAATCTAAATCATGTTACTAATGCCCTGTGCTAACACAGATGTCTCATTTATAAATCCTAGGGAACATAAGTGACTTAGCTCTC-TTTCACAGTAATGCTCAGCAAATTAACTACTCAATgaggtt--cagtatgattattaaaaacacaggcttcagtatcaagccaaccttgatttaaatgcctgttctaccactttccagctctgtgacttgcacttctctaaagcccagtttcttcattagtaaaatatggcttctactgtccaccttacagaga i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81161235 667 - 96509753 ----GAA----ATTTTAAAGTCCCAATTATGTAAACCAGGGTGAGGGATGAAGAACTACAGTTAAACCAAAGAGAAAGCCTCCTGCGGAATGACTAAAACTTGAAGTCCTTTTACAATCTCAGCCAGTACAGGAATCAGCTCTAGTTCACCTTAATATGGC-CCAGAAAGCAGGAGTAAGCCACACCTTCTCCCAGGCCCATCCT--------AAATA--ATCTGGAATTGCCAGACAGATC-ATCTCTCAGAAACTGTGTAGACTACAAATGACCC-AAAACCACTCTACACTCACTCAAAGAGGAAAGATTCCTCAATACTGAACACAAGCAAATCAGC-CCAGGAAGTTAAGTGGCAGAGGCTCCTTATGTCTCCTCTTTGTCTCTATTCTTTAATCCCAAAGCCAAATTTAATCTAAATCATGTTACTAATGCCCTGTGCTAACACAGATGTCTCATTTATAAATCCTAGGGAACATAAGTGACTTAGCTCTC-TTTCACAGTAATGCTCAGCAAATTAACTACTcaatgaggtt--cagtatgattattaaaaacacaggcttcagtatcaagccaaccttgatttaaatgcctgttctaccactttccagctctgtgacttgcacttctctaaagcccagtttcttcattagtaaaatatggcttctactgtccaccttacagaga i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76417388 667 + 90941950 ----GAA----ATTTTAAAGTCCCAATTATGTAAACCAGGGTGAGGGATGAAGAACTACAGTTAAACCAAAGAGAAAGCCTCCTGCGGAATGACTAAAACTTGAAGTCCTTTTACAACCTCAGCCAGTACAGGAATCAGCTCTAGTTCACCTTAATATGGC-CCAGAAAGCAGGAGTAAGCCACACCTTCTCCCAGGCCCATCCT--------AAATA--ATCTGGAATTGCCAGACAGATC-ATCTCTCAGAAACTGTGTAGACTACAAATGACCC-AAAACCACTCTACACTCACTCAAAGAGGAAAGATTCCTCAATACTGAACACAAGCAAATCAGC-CCAGGAAGTTAAGTGGCAGAGGCTCCTTATGTCTCCTCTTTGTCTCTATTCTTTAATCCCAAAGCCAAATTTAATCTAAATCATGTTACTAATGCCCTGTGCTAACACAGATGTCTCATTTATAAATCCTAGGGAACATAAGTGACTTAGCTCTC-TTTCACAGTAATGCTCAGCAAATTAACTACTCAATGAGGTT--CAGTATGATTATTAAAAACACAGGCTTCAGTATCAAGCCAACCTTGATTTAAATGCCTGTTCTACCACTTTCCAGCTCTGTGACTTGCACTTCTCTAAAGCCCAGTTTCTTCATTGGTAAAATATGGCTTCTACTGTCCACCTTACAGAGA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18686016 668 + 33263144 ----GAA----ATTTTAAAGTCCCAATTATGTAAACCAGGGTGAGGGATGAAGAACTACAGTTAAACCAAAGAGAAAGCCTCCTGTGGAATGACTAAAACTTGAAGTCCTTTTACAACCTCAGCCAGTACAGGAATCAGCTTTAGTTCACCTTAATATGGC-CCAGAAAGCAGGAGTAAGCCATACCTTCTCCCAGGCCCATCCT--------AAATA--ATCTGGAATTGCCGGACAGATC-ATCTCTCAGAAACTGTGTAGACTATAAATGACCCAAAAACCACTCTACACTCACTCAAAGAGGAAAGATTCCTCAATAATGAACACAAGCAAATCAGCTCCAGGAAGTTAAGTGGCAGAGGCTACTTATGTCTCCTCTTTGTCTCTATTCTTTAATCCCAAAGCCAAATTTAATCTAAATCATGTTACTAATGCCCTGTGCTAACACAGATGTCTCATTTATAAATCCTAGGGAACATAAGTGACTTAGCTCTC-TTTCACAGTAATGCTCAGCAAATTAACTACTcaacgaggtt--cagtatgattattaaaaacacaggcttcagtatcaagccaaccttgatttaaatgcctgttctaccactttccagctctgtgacttgcacttctctaaagcccagtttcttcattggtaaaatatggcttc-actgtccaccttacagagA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198390097 674 + 210400635 ----GAA----ATTTTAAAGTCCCAATTATGTAAACCAGGGTGAGAGATGAAGGACTAAAATTAAACCAAAGAGAAAACCTCCTGCAGAATGACTAAAACCTTAAGTCCTTTTACAACCTGAGTCAGTACAGGAATCAGCTCTAGTTCACCTTAATA-GTC-CCAGAAACCAAGAAGAAGCCATACCCTCTCCCAGGTCCACCCTGGAATTGAAAACA--ATCTGAAACTGCTGGACAGATC-ATCTCTCGGAAACTGAGTAGACTGCAAATGACCT-GAAACCACTCTACACTCACTCAAAGAGCAAAGATTCCTCAATACTGAGCACAAGCAAATCACCTCCAGGAAA-TAAGTGGCAGAGGCTCCTTATGTCACCTATTTGTCTCTATTCTTTCGAACCAAAGCCAAATTTAATCTAAATCATGTTACTAATGCCCTGTGCTAACACAGATGTCTCATTTATAAATCCTAGAGAACCTAAATGACTTAGCTCTC-TTTCACAGTAATGCTCAGCAAATTAACTACTCAcagaggtt--cagtatggttattaaaaacacaggctttaatatcaagccaacctagatttaaatccctgttctaccactttccagctctatgacttacatttctttaaggcccagtttcttcactagtaaaatatggcttctaccatccaccttatagAAA i calJac3.chr1 I 287 C 0 s mm10.chr15 77215531 579 + 104043685 ----CAA----ATTC----------------TAAACTGGGGAGGGGGTTG---------------------GGGGAGGGGTCCTGCTTAGCGGC-AGAGCTTGGGAACCT-----AAATCAAGTCAGTGCAGGAATGAACTTGAGCTTACCTCTGGGTGGC-CTCAGAACCAGGGCTGGGCCAAATCCTCCTCT--GTCCAACC---------AAACC--AACCAGAAATGGTGAACAGCCCTGTCTCTCCAGAA--GTGGAGATTAGGGAAGACCT-ACAATCGCTCTGACCTCA---AGGGCAAAAAAACCCCT------TCAACACGGTTAG-------CTGAGGAACTAAGTGGC--AGTCTTCCTACTGCTCCTGCCTGTGCTGGCTCTGCAGCCC--------------ACTTACACTATGCTGTTAATGCCCTTTGCAGACACAGGGGCT-----------TCCTTAGAAGCACTGGTGACCAGGCAGGCTTTTCTCAGGAATGTTCAGCAAATTAACTACTCAGGGGAGACAGAAGCATAGCTGTTAGAagcacaggc-tggccgtcaggcaggtctaagtttaaatacctgtgcaaccattttcagcctctaagactcg-gcctcattaaagctcagtctatgtatctgcaaaacatagcttctccaagttgccttggaaaga i mm10.chr15 I 1 C 0 s canFam3.chr10 41002567 651 - 69331447 GCAACAACTCCATTCTAAACTTCTAGTAAT-TGAAATGGGGGGCGAGGGGGTGCACCAAAATAAAATCAAAGAGAAGTTGTCTGACTGAAGGATGGAAACAGGAGACCCTTAAAGAAAC-AAGCTGGCCTAGGGACCAACATGAGGCTGCCTCAGTGCAGCACCAGGAACCAGAA-----------------TGAGGCCCACTCA--------GAACAATATCTGGAACAGTCAGGCAGACCTATCCCTCAGGAGCTATGTAGACTAGGAACAACCT--GATCTACTGTGGACTC----AAAGAGCGAAGACTCCTCAACACAAGGCCAAAGCAAATCAGCTTCAGGCAG-----TGGTAGAGGCTCCTTATGTCTCCCCTCTCTTTCTGCTCTACAATCCCAAAGCCAAATTTAATCCAAACTATGCTCCAAATGCCCTTTGCTAGCACAGATGTCTCATTTATAATTCCCAGGGAACATAAGTGACTCAGCTCTC-TTTTACAGGAATGCTCAGCAAATTAACTACTCAAGgagacg--ccacatggttattaaaaacacaggcttcagtgtcaggcaggcccaggttcaaatacctattccactactttccagttctgtgacctaaacttctccaaagctccgtttcttcatctgtctaatagggtttccgccacctacctcacaggga i canFam3.chr10 C 0 I 9 a score=16490.000000 s hg38.chr22_KI270876v1_alt 237265 11 + 263666 gaatgggtgtt s panTro4.chr22 34617474 11 + 49737984 gaatgggtgtt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31037063 11 + 46535552 GAATGGGTGTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100591578 11 - 115148730 GAACGGGTGTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80735362 7 + 95678458 gaacggg---- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81161902 7 - 96509753 gaacggg---- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76418055 7 + 90941950 GAACGGG---- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18686684 7 + 33263144 GAACGGG---- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198390771 11 + 210400635 GAATGGGCAtt i calJac3.chr1 C 0 C 0 s mm10.chr15 77216110 11 + 104043685 gaatggtcatt i mm10.chr15 C 0 C 0 e canFam3.chr10 41003218 9 - 69331447 I a score=701362.000000 s hg38.chr22_KI270876v1_alt 237276 267 + 263666 tgcatgtttgtttgtttgtttgtgacagggtctcactctgttgctcaggctggagtgtagtggcatgatcttggctcactacaacctctgcctcccggattcaagcaatcctcgtgcctcagcctcccaagtagttgggattgcaggcatgggccaccaaacccggctaatatttgtatttttagtagagacagggtttcgccatgttgtccatgctggtcttgaacgcctagcctcatgtgatctgcctgcctcggcctcccaaag s panTro4.chr22 34617485 267 + 49737984 tgcatgtttgtttgtttgtttgtgacagggtctcactctgttgctcaggctggagtgtagtggcgtgatcttggctcactacaacctctgcctcccggattcaagcaatcctcgtgcctcagcctcccaagtagttgggattgcaggcatgggccaccaaacccggctaatatttgtatttttagtacagacagggtttcgccatgttgtccatgctggtcttgaacgcctagcctcatgtgatctgcctgccttggcctcccaaag i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31037074 260 + 46535552 TGTA----TGtttgtttgtttgtgacagggtctcactc--ttgctcaggctggagtgtagtggtgtgattccagctcactacaacctctgcctcccggattcaagcaatcctcgtgcgtcagcctcccaagtagttgggattgtaggcatgggccaccaaatccgactaatttttgtatttttagtagagacagggtttcgccatgttgtccaggctggtcttgaacacctaacctcatgtgatctg-gtgcctcggcctcccaaag i ponAbe2.chr22 C 0 I 479 s nomLeu3.chr7b 100591589 263 - 115148730 TGTA----GGtttgtttgtttgtgacagggtctcactctgttgctcaggctggagtgtagtggcgtgatctcagctcactgcaacctctgcctcccggattcaagcaatcctcgtgcctcagcctcccaagtagttgggattgcaggcatgggccaccaaacccgactaatttttgtatttttagcagagacagggtttcgccatgttgtccaggctggtcttgaacgcctagcctcatgtgatctgcctgcctcggcctcccaaag i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80735369 253 + 95678458 ------------tgtttgtttgtgacagggtctcactc--ttgctcaggctggagtgtagaggcgtgatctcggctcactacaacctctgcctcctggattcaagcaactgtcgtgcctcagcctcccaagtagttgggattgcaggcatgggccaccacacccggcaaatttttttatttttagtagagatggggtttcgccatgttagccaggctggtcttgaatgcctagcctcatgtgatctgcctgcctcagcctcccaaag i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81161909 253 - 96509753 ------------tgtttgtttgtgacagggtctcactc--ttgctcaggctggagtgtagaggcgtgatctcggctcactacaacctctgcctcctggattcaagcaactgtcgtgcctcagcctcccaagtagttgggattgcaggcatgggccaccacacccggcaaatttttttatttttagtagagatggcgtttcgccatgttagccaggctggtcttgaatgcctagcctcatgtgatctgcctgcctcagcctcccaaag i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76418062 255 + 90941950 ------------TGTgtgtttgtgacagggtctcactctgttgttcaggctggagtgtagaggtgtgatctcggctcactacaacctctgcctcctggattcaagcaattgtcgtgcctcagcctcccaagtagttgggattgcaggcatgggccaccacacccggcaaatttttttatttttagtagagatggggtttcgccatgttagccaggctggtcttgaatgcctagcctcatgtgatctgcctgcctcagcctcccaaag i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18686691 253 + 33263144 ------------TGTGTGtttgtgacagggtctcactg--ttgctcaggctggagtgtagaggcgtgatctcggctcactacaacctctgcctcctggattcaagcaattgtcgtgcctcagcctcccaagtagttgggattgcaggcatgggccaccacacccggcaaatttttgtatttttagtagagatggggtttcgccatgttagtcaggctggtcttgaacgcctagcctcatgtgatctgcctgcctcagcctcccaaag i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198390782 222 + 210400635 tgtt----tgtttatttgtttgtgacagggtctcactccattgcccaggttggcgtgcagtg--------tcagctcactgaagcctctgcccctcggattcaagcaatcctcatgcctc---------agtagttgggattgcaggcatgggccaccacacccggctaatttttgtatttttagtagagacggggtttcgccatgttggccaagccagtctttaacg------------------------ctcaacctcccaaag i calJac3.chr1 C 0 C 0 e mm10.chr15 77216121 0 + 104043685 C e canFam3.chr10 41003218 9 - 69331447 I a score=591820.000000 s hg38.chr22_KI270876v1_alt 237543 256 + 263666 ggctggggttacaggcacaagtcaccgtgcccagccaggagagtggttgttaatagtaatgaggagtgggccggccgtggtagctcatgcctgtaatcccaacactttaagaggctgacgcgggcgggtcacctgagatcagaagctcgagaccagcctggccatcatgatgaaacc--gtctctact-aaaaatacaaaaattagctgggaatggtggctcatgcctgtaatcccagctactggggaagctgaggcag s panTro4.chr22 34617752 256 + 49737984 ggctggggttacaggcgcaagtcaccgtgcccagccaggagagtggttgttaatagcaatgaggagtgggccggccgtggtagctcatgcctgtaatcccaacactttgagaggctgaggcgggcgggtcacctgagatcagaagctcgagaccagtctggccatcatgatgaaacc--gtctctact-aaaaatacaaaaattagctgggaatggtggctcatgcctgtaatcccagctactggggaagctgaggcag i panTro4.chr22 C 0 I 25 s nomLeu3.chr7b 100591852 258 - 115148730 ttctggggttataggcgccagtcactgtgcccagccAGGAGAGTGGTTGTTAATAGTAAGGAGGAGTGggccagccgtggtggctcatgcctgtaatcccagcactttgagaggctgaggcgggcgggtcacctgaggtcagaaactcgagaccagcctggccatcatgatgaaaccctgtctctact-aaaaatataaaaattagctgggaatggtggctcatgcctgtgatcccagctactggggaagctgaggcag i nomLeu3.chr7b C 0 I 25 s rheMac3.chr10 80735622 259 + 95678458 tgctggagttacaggcgcgagccaccgcacccagccaggagagtggttgttaatagtaatgaggagtgggctggccgtggtggctcatgcttttaattccagcactttgagaggctgaggtgggcgtgtcacctgaggtcagaagcttgagaccagcctggccatcatgatgaaaccctgtctctattaaaaaacacaaaagttagctgagaatggtggctcatgcctgtaatcccagctactggggaggctgagacag i rheMac3.chr10 C 0 I 25 s macFas5.chr10 81162162 258 - 96509753 tgctggagttacaggcgcgagccaccgcacccagccaggagagtggttgttaatagtaatgaggagtgggctggccgtggtggctcatgcttttaattccagcactttgagaggctgaggtgggcgtgtcacctgaggtcagaagcttgagaccagcctggccatcatgatgaaaccctgtctctact-aaaaatacaaaaattagctgagaatggtggctcatgcctgtaatcccagctactggggaggctgagacag i macFas5.chr10 C 0 I 25 s papAnu2.chr10 76418317 258 + 90941950 tgctggagttacaggcgcgagccaccgcacccagccaggagaGTGGTTGTTAATAGTAATGAGGAgtgggctggccgtggtggctcatgcttgtaattccagcactttgagaggctgaggtgggtgtgtcacctgaggtcagaagcttgagaccagcctggccatcatgatgaaaccctgtctctact-aaaaatacaaaaattagctgagaatggtggctcatgcctgtaatcccagctactggggaggctgaggcag i papAnu2.chr10 C 0 I 25 s chlSab2.chr19 18686944 257 + 33263144 tgctggagttacaggcgcgagccaccgcacccagccAGGAGAGTGGTTGTTAATAGTAATGAGGAGTGggctggccgtggtgg-tcatgcttgtaattccagcactttgagaggctgaggtgggcgtgtcacctgaggtcagaagcttgagaccagcctggccatcatgatgaaaccctgtctctact-aaaaatacaaaaattagctgagaatggtggctcatgcctgtaatcccagctactggggaggctgaggcag i chlSab2.chr19 C 0 I 25 s calJac3.chr1 198391004 258 + 210400635 ggatgggattacaggcatgagccacaccgcccagccGGGAGAGTGGTTGTTAATAGTAATGAGGAGTGggccaggcatggtggctcacacctgtaatcccagcactttgggaggctaaggcaggtggatcacctgaggtcagaagttcgagaccagcccggccatcatgatgaaacactgtctctacg-aaaaatataaaaattagccgggaatggtagttgatgcctgtaatcccagctaccagggaggctgaagcag i calJac3.chr1 C 0 C 0 e mm10.chr15 77216121 0 + 104043685 C e canFam3.chr10 41003218 9 - 69331447 I e ponAbe2.chr22 31037334 479 + 46535552 I a score=176675.000000 s hg38.chr22_KI270876v1_alt 237799 64 + 263666 gaggtt-----------------------ttgcagcaagccgagatcacgccactgcactccagcctgggagacacagagagactct s panTro4.chr22 34618033 60 + 49737984 gaggtt-----------------------ttgcagcaagccgagatcacgccactgcactccagcctgggagacac----agactct i panTro4.chr22 I 25 C 0 s ponAbe2.chr22 31037813 62 + 46535552 gaggtt-----------------------ttgcagcaagccgagatcacgccactgcactccagcctgggtgacac--aaagactct i ponAbe2.chr22 I 479 C 0 s nomLeu3.chr7b 100592135 64 - 115148730 gaggtt-----------------------ttgcagcaagctgagatcacgccactgcgctccagcctgggtgacacagagagactct i nomLeu3.chr7b I 25 C 0 s rheMac3.chr10 80735906 64 + 95678458 gaggtt-----------------------ttgcagcaagccgagatcacgccactgcactccagcctgggtgatacagagagactct i rheMac3.chr10 I 25 C 0 s macFas5.chr10 81162445 64 - 96509753 gaggtt-----------------------ttgcagcaagccgagatcacgccactgcactccagcctgggtgatacagagagactct i macFas5.chr10 I 25 C 0 s papAnu2.chr10 76418600 64 + 90941950 gaggtt-----------------------ttgcagcaagccgagatcatgccactgcactccagcctgggtgatacagagagactct i papAnu2.chr10 I 25 C 0 s chlSab2.chr19 18687226 64 + 33263144 gaggtt-----------------------ttgcagcaagccgagatcacgctactgcactccagcctgggtgatacagagagactct i chlSab2.chr19 I 25 C 0 s calJac3.chr1 198391262 87 + 210400635 gaggatcacttgagcccaggaggcagaggttgcagcaatcgaagatcatgccactgtactccagcctgggtgacagagatagacacc i calJac3.chr1 C 0 C 0 e mm10.chr15 77216121 0 + 104043685 C e canFam3.chr10 41003218 9 - 69331447 I a score=34251.000000 s hg38.chr22_KI270876v1_alt 237863 27 + 263666 atctgaaaaatt-------------taaaaaaaaaaaaaa s panTro4.chr22 34618093 27 + 49737984 atctgaaaaatt-------------aaaaaaaaaaaaaaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31037875 40 + 46535552 atctgaaaaaTTTtaaataaataaataaataaataaataa i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80735970 25 + 95678458 atctgaaaaatt---------------aaaaaaaaaaaaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81162509 25 - 96509753 atctgaaaaatt---------------aaaaaaaaaaaaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76418664 29 + 90941950 atctgaaaaatt-----------taaaaaaaaaaaaaaaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18687290 25 + 33263144 atctgaaaactt---------------taaaaaaaaacaa i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198391349 25 + 210400635 atctgaaaaaTT---------------TTTTTTTAAAAAA i calJac3.chr1 C 0 C 0 e mm10.chr15 77216121 0 + 104043685 C e canFam3.chr10 41003218 9 - 69331447 I e nomLeu3.chr7b 100592199 0 - 115148730 C a score=955575.000000 s hg38.chr22_KI270876v1_alt 237890 340 + 263666 agagtaatgaaaagt----ggatggtatgtg--catatgtgcatta-gcaca----atacctgatgcatagcaagcattcagtaaatagtacctGGTACTATAAATTATTATTAAGGACCATAAAACAACTTCTATAAAGGAATAACACGGCCATCTGACAAC---CTTATT--AGCATTCCTGCATCTTACCCATCCCATCAT-GAATGGTAAACAGCATGAGAATGCCAAAatt----tatttaatgacta--tattgagcaac-tcctaggtgatgggggaaaa-gagtgaaggatacaacttctccctaaaaaggagctcatgttggtaggggaagacacaacaaaaaa------GAAGGGGAGGAA s panTro4.chr22 34618120 340 + 49737984 agagtaatgaaaagt----ggatggtatgtg--catatgtgcatta-gcaca----gtacctgatgcatagcaagcattcagtaaatagtacctGGTACTATAAATTATTATTAAGGACCATAAAACAACTTCTATAAAGGAATAACACGGCCACCTGACAAC---CTTATT--AGCATTCCTGCACCTTACCCATCCCATCAT-GAATGGTAAACAGCATGAGAATGCCAAAatt----tatttaatgacta--tattgagcaac-tgctaggtgacgggggaaaa-gagtgaaggatacaacttctccctaaaaaggagctcatgttggtaggggaagacacaacaaaaaa------GAAGGGGAGGAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31037915 334 + 46535552 aGAgtaatgaaaagt----ggatggtatgtg--catatgtgcatta-gcaca----gtacttgat-----gcaagcattcagtaaatagtacctGGTACTATAAATTATTATTAAGGACCATAAAACAACTTCTATAAAGGAAT-ACACGGCCACCTGACAAC---CTTATT--AGCATTCCTGCACCTTACCCATCCCATCAT-GAATGGTAAACAGCATGAGAATGCCAAAatt----tatttaatgacta--tattgagcaac-tgctaggtgatgggggaaaa-gagtgaaggatacaacttctccctataaaggagctcatgttggtaggggaagacacaacaaaaaa------GAAGGGGAGGAA i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80735995 340 + 95678458 aaagtaatgaaaagt----ggatggtatgtg--catatctgcatta-acaca----gtacttgatgcatagcaagcattcagtaaatagtacctGGTACTATAAATTATTATTAAGGAACATAAAACAACTTCTATAAAGGAATAACACAGCCACCTGACAAC---CTTATT--AGCATTCGTGCACCTTACCCATCCCATCAT-GAGTGGTAAACAGCATGAGAATGCcaaaatt----tatttaatgacta--tgttgagcaac-tgctaggtgatgggggaaaa-gagtgaaggatacaacttctccctgtaaaggagctcatgttggtaggggaagacacaacaaaaaa------gaaGGGGAGGAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81162534 340 - 96509753 aaagtaatgaaaagt----ggatggtatgtg--catatctgcatta-acaca----gtacttgatgcatagcaagcattcagtaaatagtacctGGTACTATAAATTATTATTAAGGAACATAAAACAACTTCTATAAAGGAATAACACAGCCACCTGACAAC---CTTATT--AGCATTCGTGCACCTTACCCATCCCATCAT-GAGTGGTAAACAGCATGAGAATGCCAAAATT----TATTTAATGACTA--TGTTGAGCAAC-TGCTAGGTGATGGTGGAAAA-GAGTGAAGGATACAACTTCTCCCTGTAAAGGAGCTCATGTTGGTAGGGGAAGACACAACAAAAAA------GAAGGGGAGGAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76418693 323 + 90941950 aaagtaatgaaaagt----gGATGGTATGTG--CATATCTGCATTA-ACACA----GTACTTGATGCATAGCAAGCATTCAGTAAATAGTACCTGGtactataaattattattaaggaACATAAAACAACTTCTATAAAGGAATAACACAGCCACCTGACAAC---CTTATT--AGCATTCGTGCACCTTACCCATCCCATCAT-GAGTGGTAAACAGCATGAGAATGCCAAAATT----TATTTAATGACTA--TGTTGAGCAAC-TGCTAGGTGATGGGGGAAAA-GAGTGAAGGATACAACTTCTCCCTGTAAAGGAGCTCATGTTGgtaggggaaga-----------------------ggaggaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18687315 340 + 33263144 aaaGTAATGAAAAGT----GGATGGTATGTG--CATATCTGCAtta-gcaca----gtacttgatgcatagcaagcattcagtaaatagtacctGGTACTATAAATTATTATTAAGGAACATAAAACAACTTCTATAAAGGAATAACACAGCCACCTGACAAC---CTTATT--AGCATTCGAGCACCTTACCCATCCCATCAT-GAGTGGTAAACAGCATGAGAATGCCAAAATT----TATTAAATGACTA--TGTTGAGCAAC-TGCTAGGTGATGGAGGAAAA-GAGTGAAGGATACAACTTCTCCCTGTAAAGGAGCTCATGTTGGTAGGGGAAGACACAACAAAAAA------GAAGGGGAGGAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198391374 342 + 210400635 AGAGTAATGAAAAGT----GGATGGTATGTG--CATATGTGCATCA-GCATA----GTAGTTGATGTATAGCAAGCATTCGGTACATAGTAGCTGGTACTATAAGTTATTATTAAGGACCACAAAACAACTTCTATAAAGGAATAACACAGCCATCTGACAAC---CTTATT--AGCATTCCTGCACCTTACCCATCCCATCATAGAGTGGTAAACAGCATGAGAATGTCAAAAAt----tatttaatgacta--tattgagcaac-tgctaggtgacaggggaaaaggagtgaaagatacgacctctccctgtaaaggagctcatgtgggtaggaaaagacacaacaaaaaa------GAAGGGGAGGAA i calJac3.chr1 C 0 C 0 s mm10.chr15 77216121 310 + 104043685 aggataatgaggagt----tgaagagatgtgtacataggtgtatgt-acttagtgtgtatctgatgcatagtaagcattcaataaatagtagctGTTGCTATAAATTATAATGGAGGACTGTACACCAAC-TCTGTGAAGGAGTAGCCCTGACAGTTTATAACCATCCTATTAAAGCATTTCTGCACTTCACCCATGCCATGGT-GAGACACAAA---CATGAGGATGCCATAGAC----CACTCAAGGGCTA-----------------------------------GAATGCAGCTCACCATCTCTGCC-------AGACTCATG-----AGCGGAAGCCAGAGAAAAGGACATTATGAAGCCAGAGAA i mm10.chr15 C 0 I 1 s canFam3.chr10 41003227 345 - 69331447 agaatagtggggaaccaagggggggcgtgtg--catgtgtgcaccatgcgca----gtattccatgcatcatcagcattcaataaatagtaactGTCACCGTAAATTATTACTGAAGACTATAATACAACTTCTATGAAGAAATAATACCACCAGCTG--------AGTATC--AGCATCCCTGCACCTTACCCCTCCCACTGGAGACTTGTAAACAGCACGAAAATGCCAAAGATTACatatatagtgactacctactgtgcgctgtactaggtgctaggggaa---gagggaaagacagcacctctccctgtgaagcagttggagctggtgagggaggacagGACAAAAAG------GATGCAATGGG- i canFam3.chr10 I 9 C 0 e nomLeu3.chr7b 100592199 0 - 115148730 C a score=236576.000000 s hg38.chr22_KI270876v1_alt 238230 81 + 263666 GAGAAAGTACTGAAA--------GGGGTCTCAGTATGGAACTACTACCCAGCTTAAGTGTTCCACTGTGAAGGGGCTGGGTTTAGATCT-------------------- s panTro4.chr22 34618460 81 + 49737984 GAGAAAGTACTGAAA--------GGGGTCTCAGTATGGAACTACTACCCAGCTTAAGTGTTCCACTGTGAAGGGGCTGGGTTTAGATCT-------------------- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31038249 81 + 46535552 GAGAAAGTACTGAAA--------GGAGTCTCAGTATGGAACTGCTACCCAGCTGAAGTGTTTCACTGTGAAGGGGCTGGGTTTAGATCT-------------------- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100592199 81 - 115148730 gAGAAAGTACTGAAA--------GGGGTCTCAGTATGGAACTACTACCCAGCTTAAGTGTTCCACTGTGAAGGGGCTGGGTTTAGATCT-------------------- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80736335 81 + 95678458 GAGAAAGTACTGAAA--------GGGGTCTCAGTATGGCACTACTACCCAGCTTAAGGGTTCCACTGTGAAGGGGCTGGGTTCAGATCT-------------------- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81162874 81 - 96509753 GAGAAAGTACTGAAA--------GGGGTCTCAGTATGGCACTACTACCCAGCTTAAGGGTTCCACTGTGAAGGGGCTGGGTTCAGATCT-------------------- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76419016 81 + 90941950 gagaaagtacTGAAA--------GGGGTCTCAGTATGGCACTACTACCCAGCTTAAGGGTTCCACTGTGAAGGGGCTGGGTTCAGATCT-------------------- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18687655 61 + 33263144 GAGAAAGTA----------------------------GCACTACTACCCAGCTTAAGGGTTCCACTGTGAAGGGGCTGGGTTCAGATCT-------------------- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198391716 81 + 210400635 GAGAAAGTACAGAAA--------AGCGTCTCAGTATGGAAATACTACCTAGCTTAAGTGTTCCACTGTGAAGGGGCTGGGTTTAGATCT-------------------- i calJac3.chr1 C 0 I 23 s mm10.chr15 77216432 77 + 104043685 GGGACATCACGAAGCCAGATCGTGAGGTCTCAATATGGAGTTAGCTCTCAGCTTACACATCCCACCGTAATGTGCTT-------------------------------- i mm10.chr15 I 1 C 0 s canFam3.chr10 41003572 78 - 69331447 -----------GAGA--------GAGG----------GAAGTACTGCACAGCTT--GTGTTCCACTGAGAAGGGGTTGCTTTTAAGACTGATCCCAgggcagcccaggt i canFam3.chr10 C 0 C 0 a score=37410.000000 s hg38.chr22_KI270876v1_alt 238311 29 + 263666 ATCTCAGCCGTC------------------AGGGT---------------------------CATGT---------------------------------------------------TGAATAG s panTro4.chr22 34618541 29 + 49737984 ATCTCAGCCGTC------------------AGGGT---------------------------CATGT---------------------------------------------------TGAATAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31038330 29 + 46535552 ATCTCAGCAGTT------------------AGGGT---------------------------CATGT---------------------------------------------------TGAATAG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100592280 29 - 115148730 ATCTTGGCAGTT------------------AGAGT---------------------------CATGT---------------------------------------------------TAAATAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80736416 29 + 95678458 ATCTCAGCAGTG------------------AGGGT---------------------------CATGT---------------------------------------------------TGAAGAG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81162955 29 - 96509753 ATCTCAGCAGTG------------------AGGGT---------------------------CATGT---------------------------------------------------TGAAGAG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76419097 29 + 90941950 ATCTCAGCAGTG------------------AGGGT---------------------------CATGT---------------------------------------------------TGAAGAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18687716 29 + 33263144 ATCTCAGCAGTG------------------AGGGT---------------------------CATGC---------------------------------------------------TGAATAG i chlSab2.chr19 C 0 C 0 s mm10.chr15 77216509 13 + 104043685 ----------------------------------C---------------------------CACAG---------------------------------------------------TGAACAG i mm10.chr15 C 0 C 0 s canFam3.chr10 41003650 125 - 69331447 ggctcagcggtttagtgccgccttcagcccagggtgtgatcctggagacccagagcaagtcccacgtcgggctccctgcatggagcctgcttctccctctctcgctctctgtctcttgtgaataa i canFam3.chr10 C 0 C 0 e calJac3.chr1 198391797 23 + 210400635 I a score=6811757.000000 s hg38.chr22_KI270876v1_alt 238340 1910 + 263666 -----------------------------------------------------------ATCTGTTAGGGTCATGGGGCAGG-AAAATGTCAGAAAGCAAGGCCCATTCTGGAATTCTATA----CACTAAGAATGAGGGG-AGGGGACAGTGAAAATGCAC-A-GTGAGAGAAGGA------TTTTTATCTTTTCTCTTCACATTATGCTAGGCAAAAATTATAGCAGGCATAGAGTTGACAACCATGATCAAACATTTTCAGGCAGGAACTACAAGATGACTGCTTGTTAGGTTAGTGTAGCAGCACATATTTATTTTTT--AGCAAATAGACATGGGGCTCTCAAGGAATTATAATCACGTAGTCATG---AA----GATACTCACTGGACACAGTGCACTGCACGGGAGGCTGGGAGAAGGGGAGGCCAGAAGGGGCTGGGTTCTGTAAGTCAGTGGCGTGCAAACTCACAAACCAGTGCTCTTGC-----TCTTT----CCTATAAATTTTCATCATCACAATCGCAATCTGTCAAACT----CTCAAATACACC-TTAAAGCCTGCACTGCTGAT-GGAGTACAGCAGGGCTTGGCCACTCCTTGGTCATGACAGTACATGTTCTTCAGGAAACAGCTCtgcactgg-g-aaaaaagcactccactgagaatgaagg----ctcaatatcacagactcagctttgccactagcaagagctataagaaaataagactatggatt-tggtaagtcatcta-acttctctggaactcagtttccccaaatgtaaaacgggggtgatatgattaaatgtagcgctgacattcaatggctcAGGAACTGAGGGCCAAGCTGATGTCCTCTACCCAGAGTTCTTGTTTCAGTGTTAGGGCTGACATGCCA---AAGGGCCAGGGTATCAAGACAAATGATTACAATTCACTCTCTAAACTAAACTGAAAGTTCTGGCAAAGTAGAAAGCCATCCACAACATTTCTGGTGTACAAATTAAAAA--------GACTTACATCC-TGAGCCATACCACTCATTTTATGAAGGT-----ATCTCTATTCCTTGGAGATTAAATCAAGAAAGTAATTAACAGGAATCAACAGAACAACAGTAAAGTCACCTGGCACCCAGAA-GGGCACATTGTTTGCTTGCTAAAG-GAGCCCTCCAAACTCTACAGCTGAGAAAG-CATACAGG--GGCCCTAGAGTCAGCATTCATTCCAAAAACACAGGAATGATGGTTGCTATTTCTGCTTAATAGATCAGGACCTCATAAATGGGTGTCATCTTCACTGGACGAATCATATAGTAAGAAATAATCTTACAAATGCCAGCACTCAACAAACTGGCAGCTCTTTAGAGAGGACTCTCTGGGGACCCAGAGCTGCAGTAACTGAGGGAAATGTATCCAGATTAGATCAGCAAAGGCCTCTCCAGTTCCCCATGAGG---TATTGTAGGGGGCAATG--GTGCTGGCCAACACACAAGATTTACACAATGAGCTCCCTGAATACTGCACGTGTTCGGGTCAAAAGAGCTGCCACTCTGCTACAAACAATTCATGAAGCAGCAGATGCCAACTGTCCTG-TCACCTAGGCCTTTAGCTGCAATTCCTCAAGAAAGCCTGATAGCCTTGGTTTTCATAGTAGTCACCTATTCCTCCCATTTTAAATTAAGGA--AAATAATCC-TATTTATTGTCTCAGTCTCTTCACCTTTCTTTTCCCAACATAAAAA-CATGTTTTCCCACC-----ATAAAAAAAA----AATATtaaat----aagatgtggtatatccacataatgaagtattatttagcaattaaa--------a--aatgaagtactgct-------ata----------acatggattgtgctaa---gtgaaaacattatgctaagtgaaagaagccagacacaag-ggaccacatattctattgagtcta-tttatataaactgtatacagaataggcaaaatctgtaga-----aaagtggagacc-acttgttgcatagggctggggaagtagtgggcatagaggaattaagaagtgatg s panTro4.chr22 34618570 1889 + 49737984 -----------------------------------------------------------ATCTGTTAGGGTCATGGGGCAGG-AAAATGTCGGAAAGCAAGGCCCATTCTGGAATTCTATA----CACTAAGAATGAGGGG-AGGGGACAGTGAAAATGCAC-A-GTGAGAGAAGGA------TTTTTATCTTTTCTCTTCACATTATGCCAGGCAAAAATTATAGCAGGCATAGAGTTGACAACCATGATCAAACATTTTCAGGCAGGAACTACAAGATGACTGCTTGTTAGGTTAGTGTAGCAGCACATATTTATTTTTT--AGCAAATAGACATGGGGCTCTCAAGGAATTATAATCATGTAGTCATG---AA----GATACTCACTGGACACAGTGCACTGCACGGGAGGCAGGGAGAAGGGGAGGCCAGAAGGGGCTGGGTTCTGTAAGTCAGTGGCGTGCAAACTCACAAACCAGTGCTCTTGC-----TCTTT----CCTATAAATTTTCATCATCACAATCGCAATCTGTCAAACT----CTCAAATACACC-TTAAAGCCTGCACTGCTGAT-GGAGTACAGCAGGGCTTGGCCACTCCTTGGTCATGACAGTACATGTTCTTCAGGAAACAGCTCTGCACTGG-G-Aaaaaagcactccactgagaatgaagg----ctcaatatcacagactcagctttgccactagcaagagctataagaaaataagactatggctt-tggtaagtcatcta-acttctctggaactcagtttccccaaatgtaaaacgggggtgatatgattaaatctagctctgacattcaatggctcAGGAACTGAGGGCCAAGCTGATGTCCTCTACCCAGAG---TTGTTTCAGTGTTAGGGCTGACATGCCA---AAGGGCCAGGGTATCAAGACAAATGATTACAATTCACTCTCTAAACCAAACTGAAAGTTCTGGCAAAGTAGAAAGCCATCCACAACATTTCTGGTGTACAAATTAAAAA--------GACTTACATGC-TGAGCCATACCACTCATTTTATGAAGGT-----ATCTCTATTCCTTGGACATTAAATCAAGAAAGTAATTAACAGGAATCAACAGAACAACAGTAAAGTCACCTGGCACCCAGAA-GGGCACATTGTTTGCTTGCTAAAG-GAGCCCTCCAAACTCTACAGCTGAGAAAG-CATACAGG--GGCCTTAGAGTCAGCATTCATTCCAAAAACACAGGAATGATGGTTGCTATTTCTGCTTAATAGATCAGGACCTCATAAATGGGTGTCATCTTCACTGGACGAATCATATAGTAAGAAATAATCTTACAAATGCCAGCACTCAACAAACTGGCAGCTCTTTAGAGAGGACTCTCTGGGGACCCAGAGCTGCAGTAACTGAGGGAAATGTATCCAGATTAGATCAGCAAAGGCCTCTCCAGTTCCCCATGAGG---TATTGTAGGGGGCAATG--GTGCTGGCCAACACACAAGATTTACACAATGAGCTCCCTGAATACTGCACGTGTTCGGGTCAAAAGAGCTGCCACTCTGCTACAAACAATTCATGAAGCAGCAGATGCCAACTGTCCTG-TCACCTAGGCCTTTAGCTGCAATTCCTCAAGAAAGCCTGATAGCCTTGGTTTTCATAGTAGTCACCTATTCCTCCCATTTTAAATTAAGGA--AAATAATCC-TATTTATTGTCTCAGTCTCTTCACCTTTCTTTTCCCAACATAAAAA-CATGTTTTCCCACC-----ATAAAAAAAA----TATATtaaat----aagatgtggtatatccacataatgaagtattatttagcaattaaa--------a--aatgaagtactgct-------ata----------acatggattg---------------------tgctaagtgaaagaagccagacacaag-ggaccacatattctattgagtcta-tttatataaactgtatacagaataggcaaaatctgtaga-----aaagtggagacc-acttgttgcatagggctggggaagtagtgggcacagaggaattaagaagtgatg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31038359 1910 + 46535552 -----------------------------------------------------------ATCTGATAGGGTCATGGGGCAGG-AAAATGTCGGAAAGCAAGGCCCATTCTGGAATTCTATA----CACTAAGAATGTGGGG-AGGGGACAGTGAAAATGCAC-A-GTGAGAGAAGGA------TTTTTATCTTTTCTCTTCACATTATGCTAGGCAAAAATTATAGCAGGCATAGAGTTGACAACCATGATCAAACATTTTCAGGCAGGAACTACAAGATGACTGCTTGTTAGGTTAGTGTAGCAGCACATATTTATTTTTC--AGCAAATAGACATGGGGCTCTCAAGGAATTATAATCATGTAGTCATG---AA----GATACTCACTGGACACAGTGCACTGCACGGGAGGCTGGGAGAAGGGGAGTCCAGAAGGGGCTGGGTTCTGTGAGTCAGTGGCACACAAACTCACAAACCAGTGCTCTTGC-----TCTTT----CCTATAAATTTTCATCATCACAATCGCAATCTGTCAAACT----CTCAAATACACCTTTAAAGCCTGCACTGCTGAT-GGAGTACAGCAGGGCTTGGCCACTCCTTGGTCATGACAGTACATGTCCTTcaggaaacagctctgcactgg-g-aaaaaagcactcaactgagaatgaagg----ctcaaaatcacagactcagctttgccactagcaagggctataagaaaataagactatggctt-tggtaagtcatctg-acttctctggaactcagtttccccaaatgtaaaacgggggtgatatgattaaatctagctctgacattcaatggctcAGGAACTGAGGGCCAAGCTGATGTCCTCTACCCAGAGTTCTTCTTTCAGTGTTAGGGCTGACATGCCA---AAGGGCCAGGGTATCAAGACAAATGATTACAATTCACTCTCTAAACTAAACTGAAAATTCTGGCAAAGTAGAAAGCTATCCACAACATTTCTAATGTACAAATTAAAAA--------GACTTACATCC-TGACCCATACCACTCATTTTATGAAGGT-----ATCTCTGTTCCTTGGAGATTAAATCAAGAAAGCAATCAACAGGAATCAACAGAACAACAGTAAAGTCACCTGGCACCCAGAA-GGGCACATTGTTTGCTTGCTAAAG-GAGCCCTCCAAACTCTACAGCTGAGAAAG-CATACAGG--GGCCTTAGAGTCAGCATTCATTCCAAAAACACAGGAATGATGGTTGCTATTTCTGCTTAATAGATCAGGACCTCATAAATGGGTGTCATCTCCACTGGACGAATCATATAGTCAGAAATAATCTTACAAATGCCAGCACTCAACAAACTGGCAGCTCTTTAGAGAGGACTCTCTGGGGACCCAGAGCTGCAGTAACTGAGGGAAATGTATCCAGATTAGATCAGCAAAGGCCTCTCCAGTTCCCCACGAGG---TATTGTAGGGGGCAATG--GTGCTGGCCAACACACAAGATTTACACAATGAGCTCCCTGAATACTGCACGTGTTCGGGTCAAAAGAGCTGCCACTCTGCTACAAACAGTTCATGAAGCAGCAGATGCCAACTGTCCTG-TCACCTATGTCTTTAGCTGCAATTTCTCAAAAAAGCCTGATAGGCTTGGATTTCATAGTAGTCACCTATTCCTCCCATTTTAAATTAAGGA--AAATAATCC-TATTTATTGTTTCAGTCTCTTCACCTTTCTTTTCCTAACATAAAAA-CATGTTTTCCCACC-----ATAAAAAAAA-----ATAataaat----aagatgtggtatatccacacaatgaaatattatttagcaattaaa--------a--aatgaagtactgct-------ata----------acatggattgtgctac---gtgaaaacattacactaagtgaaagaagccagacacaag-ggaccacatattgtattgagtcta-tttatataaactgtatccagaataggcaaaatctgtaaa-----aaagtggagacc-acttgttgcatagggctggggaagtagcgggcatagaggtactaagaagtgatg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100592309 1914 - 115148730 -----------------------------------------------------------ATCTGTTAGGGTCATGGGGCAGG-AAAATGTTGGAAAGCAAGGCCCATTCTGGAATTCTATA----CACTAAGAATGAGGGG-AGGGGACAGGGAAAATGCAC-A-GTGAGAGAAGGA------TTTTTATCTTTTCTCTTCACATTATGCTAGGCAAAAATTATAGCAGGCATAGAGTTGACAACCATGATCAAACATTTTCAGGCAGGAACTACAAGATGACTGCTTGTTAGGTTAGTGTAGCAGCACGTATTTATTTTTT--AGCAAATAGACATGGGGCTCTCCAGGAATTATAATCATGTAGTCATA---AA----GATACTCACTGGACACAGTGCACTGCACGGGAGGCTGGGAGAAGGGGAGGCCAGAAGGGGCTGGGTTCTGTGAGTCAGTGGCATGCAAACTCACAAACCAGTGCTCTTGC-----TCTTT----CCTATAAATTTTCATCATCACAATTGCAATCTGTCAAACT----CTCAAATACACC-TTAAAGCCTGCACTGCTGAT-GGAGTACAGCAGGGCTTGGCCACTCCTTGGTCATGACAGTACATGTCCTTCAGGAAACAGCTCtgcactgg-c-aaaaaagcactcaacggagaatgaagg----ctcaatatcacagactcagctttgccactagcaagagctataagaaaataagactatggctt-tggtaagtcatcta-acttctctggaactcagtttccccaaatgtaaaacaggagtgatatgattaaatctagctctgacattcaatggctcAGGAACTGAGGGCCAAGCTGATGTCCTCTACCCAGAGTTCTTGTTTCAGTGTTAGGGCTGACATGCCA---AAGGGCCAGGGTATCAAGACAAATGATTACAATTCACTCTCTAAACTAAACTGAAAGTTCTGGCAAAGTAGAAAGCCATCCACAACATTTCTGGTGTACAAATTAAAAA--------GACTTACATCC-TGACCCATACCACTCATTTTATGAAGGT-----ATCTCTGCTCCTTGGAGATTAAATCAAGAAAGCAATCAACAGGAATCAACAGAACAACAGTAAAGTCACCTGGCACCCAGAA-GGGCACATTGTTTGCCTGCTAAGG-GAGCCCTCCAAACTCTACAGCTGAGAAAG-CATACAGG--GGCCTTAGAGTCAGCATTCATTCCAAAAACACAGGAATGATGGTTGCTATTTCTGCTTAATAGATCAGGACCTCATAAATGGGTGTCATCTCCACTGGACGAATCATATAGTCAGAAATAATCTTACAAATGCCAGCACTCAACAAACTGGCAGCTCTTTAGAGAGGACTCTCTGGGGACCCAGAGCTGCAGTAACTGAGGGAAATGTATCCAGATTAGATCAGCAAAGGCCTCTCCAGTTCCCCATGAGG---TATTGTAGGGGGCAATG--GTGCTGGCCAACACACAAGATTTACACAATGAGCTCCCTGAATACTGCACGTGTTCGGGTCAAAAGAGCTGCCACTCTGCTACAAACAATTCATGAAGCAGCAGATGCCAACTGTCCTG-TCACCTAGGCCTTTAGCTGCAATTCCTCAAGAAAGCCTGACAGGCTTGGTTTTCATAGTAGTCACCTATTCCAACCATTTTAAATTAAGGA--AAATAATCC-TATTTATTGTTTCAGTCTCTTCACCTTTCTTTTCCCGACATAAAAA-CATGTTTTCCCACC-----ATAAAAAAAATAACAATAataaat----aagatgtggtatatccacataatgaaatcttatttagcaattaaa--------a--aatgaagtactgct-------ata----------acatggattgtgctat---gtgaaaacattatgctaagtgaaagaaggcagacacaag-ggaccacatattatattgagtcta-tttatataaactgtacacagaataggcaaaatctgtaga-----aaagtggagacc-acttgttgcatagggctggggaaatagcgggcatagaggaattaagaagtgatg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80736445 1886 + 95678458 -----------------------------------------------------------ATCTGTTAGGGTCACGGGACAGG-AAAATGTTGGAAAGCAAGGCCCATTCTGGACTTCTGTA----CACTAAGAATGAGAGG-AGGGGACAGTCAAAATGCAT-A-GTGAGAGAAGGATTTTTATTTTTATCTTTTCTCTTCACATTACACTAGGCAAAAATTATACCAGGCATAGAGCTGACAACCATGATCAAATATTTTCAAGCAGGAACTACAAGATGACTGCTTGTTAGGTTAGTGTAGCAGCACATATTTATTTTTT--AGCAAATAG-CCTGGGGCTCTCAAGGAATTATAATCACGTAGTCATG---AA----GATACTCACCGGACACAGTGCACTGCACGGGAGGCTGGGGGAAGGGGAGGCCAGAAGGGGCTGGGTTCTGTGAGTCAGTGGCACGCAAACTCACAAACCAGTGCTCTTGC-----TCTTT----CCTATAAATTTTCATCATCACAATTGCAATCTGTCAAACT----CTCAAGTACACC-TTAAAGCCTGCACTGCTGAT-GGAGTACAGCAGGGCTTGGCCACTCCTTGGTCATGACAGTACATGTCCTTCAGGAAACAGCTCTGCACTGG-G-Aaaaaagcactcaactgagaatgaagg----ctcaatatcacagactcagctttgccactagcaagagatataagaaaataagactatggctt-tgataagtcatcta-acttctctggaactcagtttccccaaatgtaaaataggggtgatatgattaaatctagctctgacattcaatggctcAGGAACTGAGGGCCAAGCTGACGTCCTCTACCCAGAGTTCTTGTTTCAGTATTAGGGCTGACATGCCA---AAGGGCCAGGGTATCAAGACAAATGATTACAATTCACTCTCTAAACTAGACTGAAAGTTCTGGCAAAGTAGAAAGCCATCTACAACATTTCTGGTGTACAAATTAAAAA--------GACTTACATCC-TGACCCATATCAC----------------------------TCCTTGGAGATTAAATCAAGAAAGCAAGCAACAGGAATCAACAGAACAACAGTCAAGTCACCTGGCACCCAGAA-GGGCGCATTGTTTGCTTGCTAAAG-GAGCCCTCCAAATTCTGCAGCTGAGAAAGACATACAGG--GGCCTTAGAGTCAGCATTCATTCCAAAAACACAGGAATGATGGTTGCTATTTCTGCTTAATAGATCAGGACCTCACAAATGGGTGTCATCTCCACTGGACGAATCATATAGTCAGAAATAATCTTACAAATGCCAGCACTCAACAAACTGGCAGCTCTTTAGAGAGGACTCTCTGGGGACCCAGAGCTGCAGTAACTGGGGGAAATGTATCCAGATTAGATCAGCAAAGGCCTCTCCAGTTCCCCATGAGG---TATTGTAGGGGGCAATG--GTGCTGGCCAACACACAAGATTTACACAATGAGCT-CCTGAATACTGCACATGTTCGGGTCAAAAGAGCTGCCGCTCTGCTACAAACAATTCATGAAGCAGCAGATGCCAACTGTCCTG-TCACCTAGGCCTTCAGCAGTAATTCCTCAAGAAAGCCTGATGGGCTTGGTTTTCATGGTAGTCACCTATTCCTCCCATTTTAAATTAAGGA--AAATAATCCTTATTTATTGTCTCATTCTCTTCACTTTTCTTTTCCCAACATAAAAA-CATGTTTTCCCACC-----ataaataaat------aaataaata---aaGatgtggtatatccac--------atattatttagcaattaaa--------a--aatgaagtactgct-------ata----------acatggattgtgctactatgtgaaaacattgttttaagtgaaagaagccagacacaag-ggaccacatattttattgagtcta-tttatataaactatatacagaataggc-aaatctatgga-----aaagtggagacc-acttgttgcatagggctagggaagtagtgggcatagaggaattaagaagtgatg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81162984 1886 - 96509753 -----------------------------------------------------------ATCTGTTAGGGTCACGGGACAGG-AAAATGTTGGAAAGCAAGGCCCATTCTGGAATTCTGTA----CACTAAGAATGAGAGG-AGGGGACAGTCAAAATGCAT-A-GTGAGAGAAGGATTTTTATTTTTATCTTTTCTCTTCACATTACACTAGGCAAAAATTATACCAGGCATAGAGCTGACAACCATGATCAAATATTTTCAAGCAGGAACTACAAGATGACTGCTTGTTAGGTTAGTGTAGCAGCACATATTTATTTTTT--AGCAAATAG-CCTGGGGCTCTCAAGGAATTATAATCACGTAGTCATG---AA----GATACTCACCGGACACAGTGCACTGCACGGGAGGCTGGGGGAAGGGGAGGCCAGAAGGGGCTGGGTTCTGTGAGTCAGTGGCACGCAAACTCACAAACCAGTGCTCTTGC-----TCTTT----CCTATAAATTTTCATCATCACAATTGCAATCTGTCAAACT----CTCAAGTACACC-TTAAAGCCTGCACTGCTGAT-GGAGTACAGCAGGGCTTGGCCACTCCTTGGTCATGACAGTACATGTCCTTCAGGAAACAGCTCTGCACTGG-G-Aaaaaagcactcaactgagaatgaagg----ctcaatatcacagactcagctttgccactagcaagagatataagaaaataagactatggctt-tggtaagtcatcta-acttctctggaactcagtttccccaaatgtaaaataggggtgatatgattaaatctagctctgacattcaatggctcAGGAACTGAGGGCCAAGCTGACGTCCTCTACCCAGAGTTCTTGTTTCAGTATTAGGGCTGACATGCCA---AAGGGCCAGGGTATCAAGACAAATGATTACAATTCACTCTCTAAACTAGACTGAAAGTTCTGGCAAAGTAGAAAGCCATCTACAACATTTCTGGTGTACAAATTAAAAA--------GACTTACATCC-TGACCCATATCAC----------------------------TCCTTGGAGATTAAATCAAGAAAGCAAGCAACAGGAATCAACAGAACAACAGTCAAGTCACCTGGCACCCAGAA-GGGCGCATTGTTTGCTTGCTAAAG-GAGCCCTCCAAATTCTGCAGCTGAGAAAGACATACAGG--GGCCTTAGAGTCAGCATTCATTCCAAAAACACAGGAATGATGGTTGCTATTTCTGCTTAATAGATCAGGACCTCACAAATGGGTGTCATCTCCACTGGACGAATCATATAGTCAGAAATAATCTTACAAATGCCAGCACTCAACAAACTGGCAGCTCTTTAGAGAGGACTCTCTGGGGACCCAGAGCTGCAGTAACTGGGGGAAATGTATCCAGATTAGATCAGCAAAGGCCTCTCCAGTTCCCCATGAGG---TATTGTAGGGGGCAATG--GTGCTGGCCAACACACAAGATTTACACAATGAGCT-CCTGAATACTGCACATGTTCGGGTCAAAAGAGCTGCCGCTCTGCTACAAACAATTCATGAAGCAGCAGATGCCAACTGTCCTG-TCACCTAGGCCTTCAGCAGTAATTCCTCAAGAAAGCCTGATGGGCTTGGTTTTCATGGTAGTCACCTATTCCTCCCATTTTAAATTAAGGA--AAATAATCCTTATTTATTGTCTCATTCTCTTCACTTTTCTTTTCCCAACATAAAAA-CATGTTTTCCCACC-----ATAAataaat------aaataaata---aagatgtggtatatccac--------atattatttagcaattaaa--------a--aatgaagtactgct-------ata----------acatggattgtgctactatgtgaaaacattgttttaagtgaaagaagccagacacaag-ggaccacatattttattgagtcta-tttatataaactatatacagaataggc-aaatctatgga-----aaagtggagacc-acttgttgcatagggctagggaagtagtgggcatagaggaattaagaagtgatg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76419126 1882 + 90941950 -----------------------------------------------------------ATCTGTTAGGGTCACGGGACAGG-AAAATGTTGGAAAGCAAGGCCCATTCTGGAGTTCTGTA----CAGTAAGAATGAGAGG-AGGGGACAGTCAAAATGCAC-A-GTGAgagaaggatttttatttttatcttttctcttcacATTATGCTAGGCAAAAATTATACCAGGCATAGAGCTGACAACCATGATCAAATATTTTCAAGCAGGAACTACAAGACGACTGCTTGTTAGGTTAGTGTAGcagcacatatttatttttt--agcaaatAG-CCTGGGGCTCTCAAGGAATTATAATCATGTAGTCATG---AA----GATACTCACCGGACACAGTGCACTGCAcgggaggctgggggaaggggaggccaGAAGGGGCTGGGTTCTGTGAGTCAGTGGCACGCAAACTCACAAACCAGTGCTCTTGC-----TCTTT----CCTATAAATTTTCATCATCACAATTGCAATCTGTCAAACT----CTCAAGTACACC-TTAAAGCCTGCACTGCTGAT-GGAGTACAGCAGGGCTTGGCCACTCCTTGGTCATGACAGTACATGTCCTTCAGGAAACAGCTCTGCACTGG-G-AAAAAAGCACTCAACTGAGAATGAAGG----CTCAATATCACAGACTCAGCTTTGCCACTAGCAAGAGATATAAGAAAATAAGACTATGGCTT-TGGTAAGTCATCTA-ACTTCTCTGGaactcagtttccccaaatgtaAAATAGGGGTGATATGATTAAATCTAGCTCTGACATTCAATGGCTCAGGAACTGAGGGCCAAACTGATGTCCTCTACCCAGAGTTCTTGTTTCAGTATTAGGGCTGACATGCCA---AAGGGCCAGGGTATCAAGACAAATGATTACAATTCACTCTCTAAACTAGACTGAAAGTTCTGGCAAAGTAGAAAGCCATCTACAACATTTCTGGTGTACAAATTAAAAA--------GACTTACATCC-TGACCCATATCAC----------------------------TCCTTGGAGATTAAATCAAGAAAGCAAGCAACAGGAATCAACAGAACAACAGTAAAGTCACCTGGCACCCAGAA-GGGCGCATTGTTTGCTTGCTAAAG-GAGCCCTCCAAATTCTGCAGCTGAGAAAGACATACAGG--GGCCTTAGAGTCAGCATTCATTCCAAAAACACAGGAATGATGGTTGCTATTTCTGCTTAATAGATCAAGACCTCACAAATGGGTGTCATCTCCACTGGACGAATCATATAGTCAGAAATAATCTTACAAATGCCAGCACTCAACAAACTGGCAGCTCTTTAGAGAGGACTCTCTGGGGACCCAGAGCTGCAGTAACTGGGGGAAATGTATCCAGATTAGATCAGCAAAGGCCTCTCCAGTTCCCCATGAGG---TATTGTAGGGGGCAATG--GTGCTGGCCAACACACAAGATTTACACAATGAGCT-CCTGAATACTGCACATGTTCGGGTCAAAAGAGCTGCCGCTCTGCTACAAACAATTCATGAAGCAGCAGATGCCAACTGTCCTG-TCACCTAGGCCTTCAGCAGTAATTCCTCAAGAAAGCCTGATGGGCTTGGTTTTCATAGTAGTCACCTATTCCTCCCattttaaattaagga--aaataatcCTTATTTATTGTCTCattctcttcacttttcttttcccaacataaaaa-catgttttcccacc---------ataaat------aaataaata---aagatgtggtatatccac--------atattatttagcaattaaa--------a--aatgaagtaccGCT-------ATA----------ACATGGATTGTGCTACTATgtgaaaacattgttttaagtgaaagaagccagacacaag-ggACCACATATTTTATTGAGTCta-tttatataaactatatacagaataggc-aaatctatgga-----AAAGTGGAGACC-ACTTGTTGCATAGGGCTAGGGAAGTAGTGGGCATAGAGGAATTAAGAAGTGATg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18687745 1896 + 33263144 -----------------------------------------------------------ATCTGTTAGGGTCATGGGACAGG-AAAATGTTGGAAAGCAAGGCCCATTCTGGAATTCTGTA----CACTAAGAATGAGAGG-AGGGGACAGTCAAAATGCAC-A-GTGAGAGAAGGATTTTTGTTTTTATCTTTTCTCTTCACATTATGCTAGGCAAAAATTATACCAGGCATAGAGCTGACAACCATGATCAAATATTTTCAAGCAGGAACTACAAGATGACTGCTTGTTAGGTTAGTGTAGCAGCACATATTTATTTTTT--AGCAAATAG-CCTGGGGCTCTCAAGGAATTATAATCATGTAGTCATG---AA----GATACTCACCGGACACAGTGCACTGCACGGGAGGCTGGGGGAAGGGGAGGCCAGAAGGGGCTGGGTTCTGTGAGTCAGTGGCATGCAAACTCACAAACCAGTGCTCTTGC-----TCTTT----CCTATAAATTTTCATCATCACAATTGCAATCTGTCAAACT----CTCAAGTACACC-TTAAAGCCTGCACTGCTGAT-GGAGTACAGCAGGGCTTGGCCACTCCTTGGTCATGACAGTACATGTCCTTCAGGAAACAGCTCTACACTGG-G-Aaaaaagcactcaactgagaatgaagg----ctcaatatcacagactcagctttgccactagcaagagctataagaaaataagactatggctt-tggtaagtcatcta-acttctctggaactcagtttccccaaatgtaaaataggggtgatatgattaaatctagctctgacattcaatggctcAGGAACTGAGGGCCAAGCTGACGTCCTCTACCCAGAGTTCTTGTTTCAGTATTAGGGCTGACATGCCA---AAAGGCCAGGGTATCAAGACAAATGATTACAATTCACTCTCTAAACTAGACTGAAAGTTCTGGCAAAGTAGAAAGCCATCTACAACATTTCTGGTGTACAAATTAAAAA--------GACTTACATCC-TGACCCATATCAC----------------------------TCCTTGGAGATTAAATCAAGAAAGCGAGCAACAGGAATCAACAGAACAACAGTAAAGTCACCTGGCACCCAGAA-GGGCGCATTGTTTGCTTGCTAAAG-GAGCCCTCCAAATTCTGCAGCTGAGAAAGACATACAGG--GGCCTTAGAGTCAGCATTCATTCCAAAAACACAGGAACGATGGTTGCTATTTCTGCTTAATAGATCAGGACCTCACAAATGGGTGTCATCTCCACTGGACGAATCATATAGTCAGAAATAATCTTACAAATGCCAGCACTCAACAAACTGGCAGCTCTTTAGAGAGGACTCTCTGGGGACCCAGAGCTGCAGTAACTGGGGGAAATGTATCCAGATTAGATCAGCAAAGG-CTCTCCAGTTCCCCATGAGG---TATTGTAGGGGGCAATG--GTGCTGGCCAACACACAAGATTTACACAATGAGCT-CCTGAATACTGCACGTGTTCGGGTCAAAAGAGCTGCCGCTCTGCTACAAACAATTCATGAAGCAGCAGATGCCAACTGTCCTG-TCACCTAGGCCTTTAGCTGTAATTCCTCAAGAAAGCCTGATGGGTTTGGTTTTCATAGTAGTCACCTATTCCTCCCATTTTAAATTAAGGA--AAATAATCCTTATTTATTGTCTCATTCTCTTCACTTTTCTTTTCCCAACATAAAAA-CATGTTTTCCCACCATAaaataaataaat------aaataaataaataagatgtggtatatccacat-----aatattatttagcaattaaa--------a--aatgaagtactgct-------ata----------acatggattgtgctactatgtgaaaacattgttttaagtgaaagaagtcagacacaag-ggaccacatattttattgagtcta-tttatataaactatatacagaataggc-aaatctataga-----aaagtggagacc-acttgttgcatagggctagggaagtagtgggcatagaggaattaagaagtgatg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198391820 1906 + 210400635 -----------------------------------------------------------AGCAGTTAGGGTCATGGTGCAGGAAAAATGTCAGAAAGCAAGGCCCATTCTGGGGTTCTATA----CACTAAGAATGAG-GA-AAGGGACCGTGAAAATGCAT-A-GTAAGGGAAGGA------TTTTTATGTTTTCTCTTCATACTACACTAGGCAAAAATTATACCACGCATAGAGCTGACAACCATGATCAAACATTTTCAAGATGGAACTACAAGATGACTGCTTGTGAGGTCAGTGTAACAGTACTTTTTTTTTTTTTTAAGCAAATAAACATGGGGCTCTCAAGGAATTATAATCAGGTAGTCAAG---AA----GATACTCAGTGGACACAGTGCACTGTGCGGGAGGCTGGGGGAAGGGGAG-CCAGAAGGGGCTGGGTTCTATGAGTCAGTGGCATGCAAACTCACAAACCAGTGCTCTTAC-----TCTCT----CTCATAAATTTTCATCATCACAATTGCAATCTGTCAAACT----CTCATATACACC-GTAAAGCCTGCACTGTTGAT-GGAGTACAGGAGGGCTTGGCCACTCCTTGGTCATGACAGTACATGTCCATCAGGAAACAGTACTGCTCTGG-GAAAAAAAGCACTCAACTGAGAACGAAGG----CTCAATATCACAGACT--GTTATGCTGCTAGCAAGAGCTGTAAGAAAATAAGACtatggctt-tgataggtcatcta-acttctatggaactcaatttcccaagatgtaaaacaggggtgatatgattaaat------CTGACATTCAGTGGCTCAGGAACTGAGGGCCAAGCTGACATCCTCTACCCAGAGTTCTTGTTTCAGTGTTAGGGCTGACATGCCA---AAGGGCCAGAGTATCAAGACAAGTGATCACAATTCACTCTCTAAACTAGACTGAAAGTTCTGGCAAAGTACAAAGCCATCCACAACATTTCTGGTGTACAAATTTAAAA--------GACTTATGTCC-TAACCCATACCACTCATTTTATGAAGGT-----ATCTCTGTTCCTTGGAGATTAAATCAAGAAAGCAAGCAACAGGAATCAACAG---AAGAGTAAAGTCACCCAGCACCCGGAA-GGGTACATTGTTTACTTGCTAAAG-GAGCCCTCCAACCCGTACAGCTGAGAAAGACATATGGGGAGACCTTAGAGTCAGCATTCATTCCAAAAGCACAGTAATGATGGTTGCTATTTCTGCTTAATAGGTCAGGACCTCAAAAATGAGTGTCCTCTCCACTGGACGAATCATATAGTCAGAAATAATCATACAAATGCCAACACTCAACAAACTGGCA-----TTAGAGAGGACTCTCTGGGGACCCAGAGCTGTAGTAACTGAGGGAAATGTATCCAGATTAGATCAGCAAAGGCCTCTCTAGTTCCCCATGAGGTATTATTGTAGGGGGCAATG--GCGCTGGCCAACACACAAGATTTACACAATGAGCTCCCTGAATACTGCACGTGTTCGGGTCAAAAGAGCTGTCACTCTGCTACAAACAATTCATGAAGCAGCAGATGCCAACTGTCCTA-TCACCTAGGCCTTTAGCTGCAATTTCTCAAGAAAGCCTGATAGGTTTGGTTTTCATAGTAGTCACCTATTCCTCCCATTTTAAATGAAGAA--AAATAATCCTTATTTATTGTCTCATTCTCTTCACCTTTCTTTTTCCAACATAAAAA-CATGTTTTCCCACC-----ATAAAAAAAA--------Gtaaat----aagatgtagtatatccacataatgaaatattctttagcaattaaa--------a--aatgaaatactgct-------ata----------acatagattatgctactatgtgaaaacattatgctaagtgaaagaagccagacacaag-ggaccacatattgtattgagtcta-tttatacaaactgtatacagaataggc-aaatctgtagagacagaaagtagagacc-agtggttgcatagggcttgggaagtagcgggcatagaggaattaagaagtgatg i calJac3.chr1 I 23 C 0 s mm10.chr15 77216522 1657 + 104043685 --------------------------------------------------------------------------------------GCGT----------------TTCTGGATCTGTACA----CCTGAAGAAGAGGGGGTAGAGAGCAGCAAATAAAGACAA-GAAGGGGAAGGA------CTCTGGTCTCCTCTCTTCACATTTTACTAG----------------GAATGGAGCTGACAA-CATAACCAACATTTTTTAGGCAAGCATTGTAAGATGGCTGCTTGCTAGACAAGGGCAGCAGCACATG-----TTTTT--ATCCAATAG-AAATAAACTCTCAAAGAACTACAATCATGTCATCACAGATAA----AACACTCAC---------------------------GGAGCAGGAGGAGGTCAG----------------TCAATC--TGGCTCCTGAGCGTACAACCCAGCGCCGTTGCCTTTGTCGTC----TCTTGAGCTTTTCATCATCACAACTCTAACCTGACACACTCACACCCACTCACACC-TCAAGGCTGGCAGTGC---T-GGAGTGGAGCAGGGCCAGGCCAAGCCTTGGTCGTGACAGTACATGTCTGTCAGGAAA-----CTGTTCTGG-A-GAAAGTGCA---AACTGCTAATAAGGGCCCTCCCTGTATCACAGGCCCAACTCT-TTACCAGCTAGAG-TATAGGCAA-----ACtgtggcctggggtaagttcaaaa-ac-actctatgacttggtttccccaactatagaaccagaatgacaTGACTAAACCCAGCTCTGACCTTCAGT-------GAGCTAAAGATGCTGCTGCTATTCT-TACCTTGGGC-----------TGTTAGAA--AACATGCCAGTGAAGAGCCAGGGCATCAAGACAAGTAACTATAGCTCATTCCCTAGAGCAGACTGATAGTTCAGGTCCAGTCAAGA---------CACAGCTCTGGAGTATAAA-------------------------------------------------------------------------------------AGAAAATCAACTAGCAGAAAACAATAGGATAAT-GTAAAATCACCCGACACCTGGGATGGGCAC-TTGTTGGCTTATAAAGG-AACACTTCCCAACACCTCAGCTCAGAGGGGCTTACAAG--AGCCT--GAGCTAGCCTTCACACCCCA--CATAGAAATGATGACTGCTACATCTGAACGATGGATTAGGGCCTAAACGAAGGG-GCTATCTGCACTGGGCAAATCCTATGGTCATAAGCAACCTCACAATTGCCTGCTCTCAGCAAACTGGCAACTCTTTCAAAAAGATGCTCAAGGGA-CTAGAGTTGCAGGAACCAAGGGAAATGTCTTCAGATTAGATCAGCAAAGGCCTCTCCAGTTCCACACAAAG---TGCTGCAGGG----ATGATGTGCTGGCCAACACACAAGATTTACACAATGCATTCCCTGAAAGCCACACGTG-TCAGGTCAGAAACACTGCAGCCCTGCCACAAATGATCCCCAGAGGGGCCCTTGCCAGC-ATCCTA-CTTCTTCTGCTGTCAG-GATAGACACTCAAGCAGGCCTAGTGTGTCTACTTTACTCAGCAG----------CTCCCATT---ACCTAAGAATTAGCAAATGCTTGCTTACTGTCCCACTTCATTTACCCTTCTCTTCCTAGCATAAAAACCATGCTTT-CCAGA-----ATAACACAGA------TTTTACAT-------------CACAGCCATGCAGAGGAACAGGACTGGGCAACAACAACACAAGGA--AAAGGAGCGCTGGT-------CGACCCTCCCCCTGCATGGAAGG-----ATATGTGAATCTGCAATGC------aaggaaaccagactcaaa-gggccacata-----------cta-tcaacac------------gcaaagga-aaacttgttgg-----gaaaagtagacctagtggctgagcacaacttgaggcatgggtggaatacaggaattaggaagggatg i mm10.chr15 C 0 C 0 s canFam3.chr10 41003775 1897 - 69331447 ataaataaaatcttaaaaaaaaaAAAAAAAAAAAAAAAGGTGATCCCACACACTAAGGAATCTGTTAGGGTCATGGGGCCGT-GCAGTGCTGGAAAATGAGGTACATCCTGGAGCTCCATAGGCCAACCAAGAGTGAA-GG-CAGAGAGAGTGGGGCTGTGT-ACTTGGGAGAAGAA------CCTTGGTCTTTTCTCTTCACGTTACACTGGGAAAAAATGACACCAAGCATGGAGCTGGCAGACAAAACTAAACATTTTCAGACAGGCGCTACAAGAGGATTGCTTGTTGGGCTGGTGCAGCAGCACATA--TATTTCTT--AGCAAATAGACATGGGACTCACAAAGAATGACAATCATATAATCAAA---AACATGAATTTTCACTGAAAACCATTCACTG------------------GGGAGGGCCAGAAGGGGCC-ACTTCTGTCGGCCAGGGGCACCCAAACTCACAAACCAGTGCTCTTGC-----TCTTTCTCGCTTGCAAATTTTCATCCTCACAATCCTGATCTGTCAAACT--GTCACACACACACC-TTAAAACCTGCATTGCTGATGGGACTAAAGAACGACTAGGCTGCTCCTCGGTCGCAACAGCATGCGTCCATCAGGAAACAGCACTGCGCTGGAG-GAAAAAGCACCAACCTGAGAACGAAGG----CTCTAGATCACAGAACC--CTCTGCTACCAGCCCAAGCTCTAAGAACAGAAGACTACAGCCC-TGGGTAGTCAACTAGACTCAGCTG--ACTTGGTTTCCCCATCAGCAGAAAAAGGGCAATGTGA-------------TGACATTCAG-GGC----GAACTGAGGGCCCAGCCGATGCTCCCTGACCTGCATTCTCGTTCATGAATCACAGCAGGTGGACCACAGAAAAGTCGGGACGTTAACACCAGCAATTACAATTTACTCTCTCA-----ACTGAAAGTTCAGGCCCAGCAAAAAGCCAGCCACAACCTTTCTGGAACACAAACTAAAAAGGTTTTGGGACTTATATTCTTGGCCCAGACCATAGAGTTTATGAAGGTCAGAACTCCCTGTTCCTTGAATATTAAACCAGGAGAGAATGCAGCAGAAAGCAATGGGACAACAGT--AGTCACCTAGCACCCAGAA-GGGCACATGGTTTGCTTGCAAAAACGAGGCCTCCAAACA-TGATGCTGAGAAGGACACAGAGG-------------------------------------AATGGCAGCTGCTATTTCTGGCCAATACATCAGGACCTGTATAACGGGTGTACTCTCCACTGAACAAATCGTGTGGTCAGAAATAATCCTGCAACTGCCAGCTCTCAACAAACTGGCAGCTCTTTAGAGAGGACTCTCTGGGGACCCAGAGCTGCAGTGACCAAGGGAAATGTACCCAGATTAGATCAGCGAAGACCTCTCCGGTTCCACATGAGG---TACTGTAGGAAGCAATG--GCACTGGCCCACACACAAGACATACACAATGAGCTCCCTGAATGCTGCACACGTTCAGGTCAGAAGAGCTGCCGCTCTGCTACAAACGACTCATGGAGCAGCAGGTGCCAGGCATCCTATTTACCTATGCTGTTAGTCACAGTTCCTCGAGAGAGCCTGATATGTGGGTTTTGCATGGTTGCTGCCCACTCCCTCCGTTTTCAATTAGGAG--GA--AGTTCTCATTCTTTATCCCATTCTCTTTACCTTTCCCTTCCCAATATAAAAA-Tatg------------------------------------aat----cagatgtggtatgtgcacacaatgggatattatttaacaacagaa--------aacaaggaagtactgatgcacgcgaca----------acatgga----ggtac--cctgaaaaca---tgctaagtgaaagaagccaaacacaaatgggtcacatagtattttgagtccattttatatgaa--atatccagaacaagc-aaatccgtggagac--aaaaacaagact-aatggctgcctcaggctttcagggagaaggggatagaggaactgggaaatgact i canFam3.chr10 C 0 I 308 a score=150113.000000 s hg38.chr22_KI270876v1_alt 240250 47 + 263666 attggccaggagcagtggctcacgcctgtaattccagcagattcaga s panTro4.chr22 34620459 47 + 49737984 attggccaggagcagtggctcacgcctgtaattccagcagattcaga i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31040269 47 + 46535552 attggccgggagcagtggctcacgcctgtaatcccagcagattcaga i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100594223 47 - 115148730 attggccgggaacagtggctcacgcttgtaatcccagcagattcaga i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80738331 47 + 95678458 attggccgggagcagtggctcacgcctgtaatcccagcagattcaga i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81164870 47 - 96509753 attggccgggagcagtggctcacgcctgtaatcccagcagattcaga i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76421008 47 + 90941950 attggccgggagcagtggctcacgcctgtaatcccagcagattcaga i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18689641 47 + 33263144 attggccgggagcagtggctcacacctgtaatcccagcagattcaga i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198393726 47 + 210400635 attggctgggagcagtggctcatgcctgtaatcccagcaaattcaga i calJac3.chr1 C 0 C 0 s mm10.chr15 77218179 16 + 104043685 acta-------------------------------agcagcttcaga i mm10.chr15 C 0 C 0 e canFam3.chr10 41005672 308 - 69331447 I a score=516347.000000 s hg38.chr22_KI270876v1_alt 240297 171 + 263666 ggctgaggcgcgtggatcacttgaggtcaggagttcaaggccagcctggccaacatggcgaaatgccacctcaactaaaaatacgaaaattaggcaggtggcatgcgcctgtagtcctagctacttaggtggctgaggcagggggatagcttgaacctgggaggcggaggt s panTro4.chr22 34620506 171 + 49737984 ggctgaggcgcgtggatcacttgaggtcaggagttcaagaccagcctggccaacatggcgaaatgccacctcaactaaaaatacgaaaattaggcaggtggcatgcgcctgtagtcctagctacttaggtggctgaggcagggggatagcttgaacctgggaggcggaggt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31040316 171 + 46535552 ggctgaggcgggtggatcacttgaggtcaggagttcaagaccagcctggccaacatggcaaaatgccacctcaactaaaaatacaaaaattaggcaggtggcgtgcgcctgtagtcctagctacttagatggctgaggcagggggatagcttgaacctgggaggcggaggt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100594270 171 - 115148730 ggctgaggcgggtggatcacttgaggtcaggagttcaagaccagcctggccaacatggcgaaatgctgcctcaactaaaaatacaaaaattaggcaggtggcatgtgcctgtagtcctagctacttaggtggctgaggcagggggatagcttgaacctgggaggtggaggt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80738378 171 + 95678458 ggctgaggtgggcagatcacttgaggtcaggagttcaagactagcctggtcaacatggcaaaatgccatctcaactaaaaatacaaaaattaggcaggtggcgtgtgcctgtagtcctagctacttaggtggctgaggcaggaggatagcttgaacctgggaggcggagct i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81164917 171 - 96509753 ggctgaggtgggcagatcacttgaggtcaggagttcaagactagcctggtcaacatggcaaaatgccatctcaactaaaaatacaaaaattaggcaggtggcgtgtgcctgtagtcctagctacttaggtggctgaggcaggaggatagcttgaacctgggaggcggagct i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76421055 171 + 90941950 ggctgaggtgggcagatcacttgaggtcaggagttcaagactagcctggtcaacatggcaaaatgccgtctcaactaaaaatacaaaaattaggcaggtggcgtgtgcctgtagtcctagctacttaggtggctgaggcaggaggatagcttgaacctgggaggcggagct i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18689688 171 + 33263144 ggctgaggtgggcagatcacttgaggtcaggagttcaagactagcctggtcaacatggcaaaacgctgtctcgactaaaaatacaaaaattaggcacgtggcgtgtgcctgtagtcctagctacttaggtggctgaggcaggaggatagcttgaacctgggaggcggagct i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198393773 170 + 210400635 ggctgaggcgggtggatcacttgaggtcaggagttcaagaccagcctggccaacatggtacaactctatcgctactaaaaataaaaacattagccagatgtggag-gcctgtagtcctagctactcggaaggctgaggcaggaggatagcttgaacctgggaggcggagct i calJac3.chr1 C 0 C 0 e mm10.chr15 77218195 0 + 104043685 C e canFam3.chr10 41005672 308 - 69331447 I a score=480839.000000 s hg38.chr22_KI270876v1_alt 240468 184 + 263666 tgcagtgagccgagatcatgctactgcactccagcctgggcaacagagtgaga--ctgtctc--------------------aaaaaaaaaaaaaagaaaaagaagtgataactacggggaatggagtttcttgtggaatactaaaaatgtcctaaaactgactgtggtgatggtgatggctgaatgattgtaaacatgcta--aaag s panTro4.chr22 34620677 186 + 49737984 tgcagtgagccgagatcatgctactgcactccagcctgggcaacagagtgaga--ctgtctc------------------aaaaaaaaaaaaaaaagaaaaagaagtgataactacggggaatggagtttcttgtggaatactaaaaatgtcctaaaactgactgtggtgatggtgatggctgaatgattgtaaacatgcta--aaag i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31040487 189 + 46535552 tgcagtgagccgagatcatgctactgcactccagcctgggcaacagagtgaga--ctgtctca---------------aaaaaaaaaaaagaaaaagaaaaagaagtgataactaaggggaatggagtttcttatggaatactaaaaatgtcctaaaactgactgtggtgatggtgatggctgaatgattgtaaacatgcta--caag i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100594441 185 - 115148730 tgcagtgagccgagatcatgctactgcactccagcctgggcaacagagtgaga--ctgtctc-------------------aaaaaaaaagaaaaagaaaaagaagtgataactaaggggaatggagtttcttgtggaatactaaaaatgtcctaaaactgactgtggtgatagtgatggctgaatgattgtaaacatgcta--aaag i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80738549 194 + 95678458 tgcagtgagccaagatcatgccactgcactccagcctaggcaacagagtgaga--ctgtctcc--------aaaaaaaaaaaaagaaaaaagaaaagaaaaagaagtggcaactaaggggaatggagtttcttgtggaataataaaaatgtcctaaacctgactgtggcaatggtgatggttgaatgac--taaacatgcta--aaag i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81165088 196 - 96509753 tgcagtgagccaagatcatgccactgcactccagcctaggcaacagagtgaga--ctgtctcca------aaaaaaaaaaaaaagaaaaaagaaaagaaaaagaagtggcaactaaggggaatggagtttcttgtggaataataaaaatgtcctaaacctgactgtggcaatggtgatggttgaatgac--taaacatgcta--aaag i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76421226 192 + 90941950 tgcagtgagccaagatcatgccactgcactctagcctaggcaacagagtgaga--ctgtctcc----------aaaaaaaaaaagaaaaaagaaaagaaaaagaagtggtaACTAAGGGGAATGGAGTTTCTTGTGGAATAATAAAAATGTCCTAAACCTGACTGTGGCGATGGTGATGGCTGAATGAC--TAAACATGCTA--AAAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18689859 202 + 33263144 tgcagtgagcgaagatcatgccactgcactccagcctaggcaacagagtaaga--ctgtctccaaaaaacaaaaaaagaaaaaagaaaaaagaaaagaaaaagaagtggtaactaaggggaatggagtttcttgtggaataataaaaatgtcctaaacctgactgtggcgatggtgatggttgaatgac--taaacatgcta--aaag i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198393943 183 + 210400635 tgcagtaagctgagattgcaccactgcactccagcctgggtgacagagtgagactctgcctc-----------------aaaaaaaaaaaaaaaaaaaaaaaaaaaagataactaaggggaatggggtttcatgtggaataatgaaaatgtcctaaaactga------tggtggtcacggttaaatgacggtaaacatgcta--aaag i calJac3.chr1 C 0 C 0 s mm10.chr15 77218195 72 + 104043685 --------------------------------------------------------------------------------------------------------------------------------------tgaagtgatgagattgttctaaa-ttaaatctgatgctgg-gatggctgagcaactctatgaatgtaaacaaag i mm10.chr15 C 0 C 0 e canFam3.chr10 41005672 308 - 69331447 I a score=1357569.000000 s hg38.chr22_KI270876v1_alt 240652 397 + 263666 cca---------cacactttaaatgggtgaactgtacagtatgtgaattatatctcaataaagctgttTTAAAGTGCCCTTGGAGAGTATATCACCTCCTTTGGGAAGGAAATTTTAATGAGGGAACTTTGATTCTTCTAGCCATCCCTT--GTTTCCAAATGCCTGCC--TGCTCCTTCCTATCAATGATTCACTTTGCTATTCCCATCCTCTGCTCACTGCACTATCTAGCTCAGGTTTACACCT----TTCCTACGAAAACGACTGGGC----T---ATTAGTTTTGTTTTGTTCTTCA---AGTCCACCTCCACTCTAG-TGGACTTTAGTGTCCTTTCTTACACACCTAGTC-TCCTTCTGTCCCAGCTCACATAGTAAAAC-----------------------------------------AATACATAT----------------ACACA-------GAAT-------------------AGTGGCTAAACAC---CTGCCACA s panTro4.chr22 34620863 397 + 49737984 cca---------cacactttaaatgggtgaactgtacagtatgtgaattatatctcaataaagctgttTTAAAGTGCCCTTGGAGAGTATATCACCTCCTTTGGGAAGGAAATTTTAATGAGGGAACTTTGATTCTTCTAGCCATCCCTT--GTTTCCAAATGCCTTCC--TGCTCCTTCCTATCAATGATTCACTTTGCTATTCCCATCCTCTGCTCACTGCACTATCTAGCTCAGGTTTACACCT----TTCCTACGAAAACGACTGGGC----T---ATTAGTTTTGTTTTGTTCTTCA---AGTCCACCAACACTCTAG-TGGACTTTAGTGTCCTTTCTTACACACCTAGTC-TCCTTCTGTCCCAGCTCACATAGTAAAAC-----------------------------------------AATACATAT----------------ACACA-------GAAT-------------------AGTGGCTAAACAC---CTGCCACA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31040676 398 + 46535552 cca---------cacactttaaatgggtgaactgtatagtatgtgaattatatctcagtaaagctgttTTAAAGTGCCCTTGGAGAGTATATAACCTCCTTTGGGAAGGAAATTTTAATGAGGGAACTTTGATTCTTCTAGCCATCCCTT--GTTTCCAAATGCCTGCC--TGCTCCTTCCTATCAATGATTCACTTTGCCATTCCCATCCTCTGCTCACTGCACTATCTAGCTCAGGTTTACACCT----TTCCTACGAAAACAACTGGGC----T---ATTAGTTTTGTTTTGTTCTTCA---AGTCCACCTCCACTCTATCTTGACTTTAGTGTCCTTTCTTACACACCTAGTC-TCCTTCTGTCCCAGCTCACATAGTAAAAC-----------------------------------------AATACGTAT----------------ACACA-------GAAT-------------------AGTGGCCAAACAC---CTGCCACA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100594626 398 - 115148730 cca---------cacactttaaatgggtgaactgtacagtatgtgaattatacctcgataaagctgttTTAAAGTGCCCTTGGAGAGTATATAACCTCCTTTGGGAAGGAAATTTTAATGAGGGAACTTTGATTCTTCTAGCCATCCCTT--GTTTCCAAATGCCTGCC--TGCTCCTTCCTATCAATGATTCACTTTGCTATTCCCATCCTCTGCTCACTGCACTATCTAGCTAAGGTTTACACCT----TTCCTACGAAAACAACTGGGC----T---ACTAGTTTTGTTTTGTTCTTCA---AGTCCACTTCCGCTCTATCTTGACTTTAATGTCCTTTCTTACACACCTAGTC-TCCTTCTGTCCCAGCTCACATAGTAAAAC-----------------------------------------AATACATAT----------------ACACA-------GAAT-------------------AGTGGCTAAACAC---CTGCCACA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80738743 400 + 95678458 cca---------tacactttaaatgggtaacttgtacagtatgtgaattatatctcaataaagctattTTAAAATGCTCTAGGAGAATATATAACCTCCCTTGGGAGGGAAATTTTAATGAGGGAACTTTGATTCTTCTAGCCATCCCTT--GTTTCTAAATGCCTGCC--TGTTCCTTCCTATCAATGATTCACTTTGCTATTCCCATCCTCTGCTCACTGCACTATCTAGCTCAGGCTTACACCT----TTCCTATGAAAACAACTGGGC----T---ATTAGCTTTGCTTTGTTCTTCA---AGTCCATGTCTGCTCTATCTTGACTTTAGTGTCCTTTCTTACACACCTAGTC-TCCTTCTGTCCCAGCTCACATAGTAAAAT-----------------------------------------AATACATAT--------------ACACACA-------GAAT-------------------AGTGGCTAAAGAC---CCGTCACA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81165284 400 - 96509753 cca---------tacactttaaatgggtaacttgtacagtatgtgaattatatctcaataaagctattTTAACATGCTCTAGGAGAATATATAACCTCCCTTGGGAGGGAAATTTTAATGAGGGAACTTTGATTCTTCTAGCCATCCCTT--GTTTCTAAATGCCTGCC--TGTTCCTTCCTATCAATGATTCACTTTGCTATTCCCATCCTCTGCTCACTGCACTATCTAGCTCAGGCTTACACCT----TTCCTATGAAAACAACTGGGC----T---ATTAGCTTTGCTTTGTTCTTCA---AGTCCATGTCTGCTCTATCTTGACTTTAGTGTCCTTTCTTACACACCTAGTC-TCCTTCTGTCCCAGCTCACATAGTAAAAT-----------------------------------------AATACATAT--------------ACACACA-------GAAT-------------------AGTGGCTAAAGAC---CCGTCACA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76421418 400 + 90941950 cca---------tacactttaaatgggtaacTTGtacagtatgtgaattatatctcaataaagctgttttaaaatgcTCTAGGAGAATATATAACCTCCTTTGGGAGGGAAATTTTAATGAGGGAACTTTGATTCTTCTAGCCATCCCTT--GTTTCCAAATGCCTGCC--TGTTCCTTCCTATCAATGATTCACTTTGCTATTCCCATCCTCTGCTCACTGCACTATCTAGCTCAGGCTTACACCT----TTCCTATGAAAACAACTGGGC----T---ATTAGCTTTGCTTTGTTCTTCA---AGTCCACGTCTGCTCTATCTTGACTTTAGTGTCCTTTCTTACACACCTAGTC-TCCTTCTGTCCCAGCTCACAtagtaaaat-----------------------------------------aatacatat--------------acacaca-------gaat-------------------aGTGGCTAAAGAC---CCGTCACA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18690061 400 + 33263144 cca---------tacactttaaatgggtaaattgtacagtatgtgaattatatctcaataaagctgttTTAAAATGCTCTAGGAGAATATATAACCTCCTTTGGGAAGGAAATTTTAATGAGGGAACTTTGATTCTTCTAGCCATCCCTT--GTTTCCAAATGCCTGCC--TGCTCCTTCCTATCAATGATTCACTTTGCTATTCCCATCCTCTGCTCACTGCACTATCTAGCTCAGGCTTACACCT----TTCCTATGAAAACAACTGGGC----T---ATTAGCTTTGCTTTGTTCTTCA---AGTCCACGTCTGCTCTATCTTGACTTCAGTGTCCTTTCTTACACACCTAGTC-TCTTTCTGTCCCAGCTCACATAGTAAAAT-----------------------------------------AATACATAT--------------ACACACA-------GAAT-------------------AGTGGCTAAAGAC---CCGCCATA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198394126 405 + 210400635 gca---------tgtactttaaatgggtgaattgtatagtatgtgaattatatctcaataaagctattTTTAAATGCCCTAAGAGAGTATATAACTTCCTTTAGGAAGGAAATTTTAATGAGAAAACTTTGATTCTTCTATCCATCCCTC--ATTTCCAAATGCCTGCC--TGCTCCTTCCTATCAACAATTCACTTTGCTATTCCCATCCTCTGCTCACTATACTACCTAGCTCAGGCTTACACCT----TTCCTAAGAGAACAACTCGGC-TGAT---ATTAGCTGTGTTTTGTTCTTCA---AGTCCACTTCTGCTCTATCTTGACTTTAGTGTCCTTCCTTACACACCTAGTT-TCCTTCTGCCCCAGCTCAAATAGTAAAAT-----------------------------------------AATATACATA------------GACACACA-------GAAT-------------------AGTGGCTAAAGAC---CTGCCACA i calJac3.chr1 C 0 C 0 s mm10.chr15 77218267 409 + 104043685 tcagtagacttctatatgctagatgattcagctgtatagcatacaagttctatctcaGAGCTGGTGTTTTTAA-TGTGCTAAGAAATTACAT--CTTTCTTCAGGAAGGTAAGT----TGAGGAGACATGAATTTTTC-AGCCAGCCGTCCAGTTTCC-AGTGCCTGCC--AGCTCCTGTCTA--------TCGCTTCTCTAGCCCCAGCCTCTGTTCCTCGCAGGATCGGGGTCAGAATTCCACCTCCGACTCCTAC---AACGGTGGGAC----TCACATCAACTTGATTTGGTCTCACAGTCAGTCAGCCCATGCTCTGTCATCACTTTAGTGTCCTGCCCCACACATCTAATTGTTCCTTTGTGCAG---CAGGGAGTGAAGT-----------------------------------------CACACAGAG--------------ACAGACACTGCCTTGAGA-------------------GAGGGCAAGATATGCACTGTCCCG i mm10.chr15 C 0 C 0 s canFam3.chr10 41005980 452 - 69331447 cta---------tatactttaaattgatgaactgcatagtat-cgaattatat-tcaataaagccattTTTAAA---------AGGAGTTATAACCTCCTTTAGAAGGGAAATGTAAGGAGGGAGAC--TGACTC-TCTGGCCATCCCCT--GTTTCCAAACGCTGGCCCTCACTCCTTCTGTTCAACTACTCACTTTGCTATTCCAGTCCCGTGCTC---------TGCTGCTCAGGCTGACCCCT----TTCCCA---AGATAACTGGGCAGGAT---AGCAGCTTTGCTTGGGTCTTAA---AGTCTATCCCTGCTCTGTCTTGACTTTAGTGTCCTTCCTTCCACATCTAGTT-TCC--CTGTCCCAGAAGGGATAGTAGAATCCCCCTAGGCAGTAGCTAGTGATCTGCAACACCATGAAAGGAATGAAGGTAAATGGTACTAAGGAAACCCA-------GATTTggggcacctgggtggctcagtggctgagcat---ctgcctca i canFam3.chr10 I 308 I 110 a score=2743689.000000 s hg38.chr22_KI270876v1_alt 241049 805 + 263666 CCATGAAAAAAAGAATGAGGA---------TAAACGACAGCATAAAAGCACAGGTTTGGGAGTTTTAACTAATTTGGTTCCAATCAAAGCATttggccaagttactttaaatgtcactgtcagtttccactgctgtaaaatgggga---aaa------ctaatgtatctaattgcatgtggttattataaaaat----------------------taaatgattaatatgatgcctggt-catgaaggtcctcaataaataataactgctattTATGGAAGTCTTATGCCCAGTTTTTCTCATGCTGTC-ATTCGGCAGCTCAGCCTCTATGTCAAAAAGCCAACAATAAAAGCAGGCTGTTGGTGCCATCAAATTGTTCACCATCAGTATTCCTATTTGTTCTAACCCATCTAACTCACAGATCCC-AGTCTATTCCTGATACTT----TGGCTTTTTTACTTCAATTTGTTTTCTTATTTCTGGGCTCAC-TTTAACCTCA--AACATGTT--TAGTATTGCCTTTCCAGTTCCATGTCCCCTTCTCAACCAAAATCTG--CTTACTGCCTTAATT-----TTATACTT-TAAGCCACTCTGGACAAATTGTTTACCCATAGTACCAAAGCACTCAGTATCCTATTCTTCCTAAAAGCATATCATGAAATCAAAACA-----AGAC-GGACTTTAG-CAAGAATTATGAT---------AAAAAAGCTtacaaccttacaagggactacttggcagccatg--aaatgatgcagcagacatagctaatggcatgaaacgatgtttataataaagtaggc-----------ctgagctggag-------gcattttacaaaagtttacacaatatgattgacatctggtaaggaatttt s panTro4.chr22 34621260 805 + 49737984 CCATGAAAAAAAGAATGAGGA---------TAAACGACCGCACAAAAGCACAGGTTTGGGAGTTTTAACTAATTTGGTTCCAATCAAAGCATttggccaagttactttaaatgtcactgtcagtttccactgctgtaaaatgggga---aaa------ctaatgtatctaattgcatgtggttattataaaaat----------------------taaatgattaatatgatgcctggt-catgaaggtcctcaataaataataactgctattTATGGAAGTCTTATGCCCAGTTTTTCTCATGCTGTC-ATTCGGCAGCTCAGCCTCTATGTCAAAAAGCCAACAATAAAAGCAGGCTGTTGGCGCCATCAAATTGTTCACCATCAGTATTCCTATTTGTTCTAACCCATCTAACTCACAGATCCC-AGTCTATTCCTGATACTT----TGGCTTTTTTACTTCAATTTGTTTTCTTATTTCTGGGCTCAC-TTTAACCTCA--AACATGTT--TAGTATTGCCTTTCCAGTTCCATGTCCCCTTCTCAACCAAAATCTG--CTTACTGCCTTAATT-----TTATACTT-TAAGCCACTCTGGACAAATTGTTTACCCACAGTACCAAAGCACTCAGTATCCTATTCTTCCTAAAAGCATATCATGAAATCAAAACA-----AGAC-GGACTTTAG-AAAGAATTATGAT---------AAAAAAGCTtacaaccttacaaggtactacttggcagccatg--aaatgatgcagcagacatagctaatggcatgaaacgatgtttataatacagtaggg-----------ctgagctggag-------gcattttacaaaagtttacagaatatgattgacatctggtaaggaatttt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31041074 799 + 46535552 CCATGAAAAAAAGAAT---GA---------TAAACGACAGCAT--AAGCACAGGTTTGGGAGTTTTAACTAATTTGGTTCCAATCAAAGCATttggccaagttactttaaatgtcactgtcagtttccactgctgtaaaatgggga---aaa------ctaatgtatctaa-tgcatgtggttattataaaaat----------------------taaatgattaatatgatgcctggt-cacgaagatcctcaataaataataactgctattTATGGAAGTCTTATGCCCAGTTTTTCTCATGCTGTC-ATTCGGCAGCTCAGCCTTTATGTCAAAAAGCCAACAATAAAAGCAGGCTGTTGGCGCCAATAAATTGTTCACAATCAATATTCCTATTTGTTCTAACCCATCTAACTCACAGATCCC-AGTCTATTCCTGATACTT----TGGCTTTTTTACTTCAATTTGTTTTCTTATTTCTGGGCTCAC-TTTAACCTCA--AACATGTT--TAGTATTGCCTTTCCAGTTCCATGTCCCCTTCTCAACCAAAATCTG--CTTACTGCCTTAATT-----TTATACTT-TAAGCCACTCTGGACAAATTGTTTAGGCACAGTACCAAAGTACTCAGTATCCTATTCTTCCTAAAAGCATATCATGAAATCAAAACA-----AGAC-GGACTTTAG-AAAGAATTATGAT---------AAAAAAGCTtacaaccttacaagggactactaggcagccatg--aaatgatgcagcagacatagttaatggcatgaaaagatgtttataataaagtaggg-----------ctgagctggag-------gcattttacaaaagtttacacaatatgattgacatcttgtgaggaatttt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100595024 805 - 115148730 CCATGAAAAAAAGAATGAGGA---------TAAACGACAGCATAAAAGCACAGGTTTGGGAGTTTTGACTAATTTGGTTCCAGTCAAAGCATttggccaagttactttaaatgtcactgtcagtttccactgctgtaaaatgggga---aaa------ctaatgtatctaattgcatgtggttattataaaaat----------------------taaatgattaatatgatgcctggt-cacgaaggtcctcaataaataataactgctattTATGGAAGTCTTATGCCCAGTTTTTCTCATGCTGTC-ATTCGGCAGCTCAGCCTCTATGTCAAAAAGCCAACAATAAAAGCAGGCTGTTGGCGCCATCAAATTGTTCACAATCAGTATTCCTATTTGTTCTAACCGATCTAACTCACAGATCCC-AGTCTATTCCTGATACTT----TGGCTTTTTTACTTCAATTTGTTTTCTTATTTCTGGGCTCAC-TTTAACCTCA--AACATGTT--TAGTACTGCCCTTCCAGTTCCATGTCCCCTTCTCAACCAAAATCTG--CTTACTGCCTTAATT-----TTATACTT-TAAGCCACTCTGGACAAATTGTTTACCCACAGTACCAAAGCACTCAGTATCCTATTCTTCCTAAAAGCATATCATGAAATCAAAACA-----AGAC-GGACTTTAG-AAACAATTATGAT---------AAAAAAGCTTACAACCTTACAAGGGATTACTAGGCAGCCATG--AAATGATGCAGCACACATAGTTAATGGCATGAAAAGATGTTTATAATAAAGTAGGG-----------CTGAGCTGGAG-------GCATTTTACAAAAGTTTACACAATATGATTGACATCTTGTAAGGAATTTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80739143 822 + 95678458 TCATG-AAAAAAGAATGAGGA---------TAAACAACAGCATAAAAGCACAGGTTTGGGAGTTTTAACTAATTTGGTTCCAATCAAAGCATttggccaagttactttaaatgtcactgtcagtttccactgctgtaaaatgggga---aaa------ctaatgtatctca-tgcatgtggttattataaaaattaagtgga----aaaatctatgtaaatgattaatatgatgcctggt-cacaaaggtcctcaata---aataactgctatttatGGAAGTCTTATGCCCAGTTTTTCTCATGCTGTC-ATTTGGCAGCTCAGCCTCTATGTCAAAAAGCCAACAATAAAAGCAGGTTGTTGGCACCATCAAATTGTTCACAATC-GTATTCCTATTTGTTCTAACCCATCTAACTCACAGATCCC-AGTCTATTCCTGATACTT----TGGCTTTTTTACTTCAATTTGTATTCTTATTTCTAGGCTCAC-TTTAACCTCA--AACATGTT--GAGTATTGCCTTTCCAGTTGCATGTCCCCTTCTCAACCAAAATCTG--CTTATCATCTTAATTATTTATTATACTT-TAAGCCACTCTGGACAAATTGTTTACCCAGAGTACCAAAGCACTCAGTATCCTATTCTTCCTAAAAGCATATAATGAAATCAAAACA-----AGTC-GGACTTTAG-AAAAAATTATGAT---------AAAAAAGCTtacaaccttacaagggactactaggcagccatg--aaatgatgcagcagacatagttaatggcatgaaaagatgtgtgtaataaagtaggg-----------ctgagctggag-------gcattttacaaaagtttgcacaatatgattgacatcttgtaaggaatttt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81165684 822 - 96509753 TCATG-AAAAAAGAATGAGGA---------TAAACAACAGCATAAAAGCACAGGTTTGGGAGTTTTAACTAATTTGGTTCCAATCAAAGCATttggccaagttactttaaatgtcactgtcagtttccactgctgtaaaatgggga---aaa------ctaatgtatctca-tgcatgtggttattataaaaattaagtgga----aaaatctatgtaaatgattaatatgatgcctggt-cacaaaggtcctcaata---aataactgctATTTATGGAAGTCTTATGCCCAGTTTTTCTCATGCTGTC-ATTTGGCAGCTCAGCCTCTATGTCAAAAAGCCAACAATAAAAGCAGGTTGTTGGCACCATCAAATTGTTCACAATC-GTATTCCTATTTGTTCTAACCCATCTAACTCACAGATCCC-AGTCTATTCCTGATACTT----TGGCTTTTTTACTTCAATTTGTATTCTTATTTCTGGGCTCAC-TTTAACCTCA--AACATGTT--GAGTATTGCCTTTCCAGTTGCATGTCCCCTTCTCAACCAAAATCTG--CTTATCATCTTAATTATTTATTATACTT-TAAGCCACTCTGGACAAATTGTTTACCCAGAGTACCAAAGCACTCAGTATCCTATTCTTCCTAAAAGCATATAATGAAATCAAAACA-----AGTC-GGACTTTAG-AAAAAATTATGAT---------AAAAAAGCTtacaaccttacaagggactactaggcagccatg--aaatgatgcagcagacatagttaatggcatgaaaagatgtgtgtaataaagtaggg-----------ctgagctggag-------gcattttacaaaagtttgcacaatatgattgacatcttgtaaggaatttt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76421818 822 + 90941950 ccatg-aaaaaagaatgagga---------taaacaacagtataaaagcacAGGTTTGGGAGTTTTAACTAATTTGGTTCCAATCAAAGCATTTGGTCAAGTTACTTTAAATGTCACTGTCAGTTTCCActgctgtaaaatgggga---aaa------ctaATGTATCTCA-TGCATGtggttattataaaaattaagtggA----AAAATCTATGTAAATGATTAATATGATGCCTGGT-CACAAAGGTCCTCAATA---AATAACTGCTATTTATGGAAGTCTTATGCCCAGTTTTTCTCATGATGTC-ATTTGGCAGCTCAGCCTCTATGTCAAAAAGCCAACAATAAAAGCAGGTTGTTGGCACCATCAAATTGTTCACAATC-GTATTCCTATTTGTTCTAACCCATCTAACTCACAGATCCC-AGTCTATTCCTGATACTT----TGGCTTTTTTACTTCAATTTGTATTCTTATTTCTGGGCTCAC-TTTATCCTCA--AACATGTT--GAGTATTACCTTTCCAGTTGCATGTCCCCTTCTCAACCAAAATCTG--CTTATcactttaattatttattatactt-taaaccACTCTGGACAAATTGTTTACCCAGAGTACCAAAGCACTCAGTATCCTATTCTTCCTAAAAGCATATAATGAAATCAAAACA-----AGTC-GGACTTTAG-AAAGAATTATGAT---------AAAAAAGCTTACAACCTTACAAGGGACTACTAGGCAGCCATG--AAATGATGCAGCAGACATAGTTAATGGCATGAAAAGATGTGTGTAATAAAGTAGGG-----------CTGAGCTGGAG-------GCATTTTACAAAAGTTTGCACAATATGATTGACATCTtgtaaggaatttt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18690461 822 + 33263144 GAATG-AAAAAAGAATGAGGA---------TAAACGATAGCATAAAAGCACAGGTTTGGGAGTTTTAACTAATTTGGTTCCAATCAAAGCATttggccaagttactttaaatgtcactgtcagtttccactgctgtaaaatgggga---aaa------ctaatgtatctca-tacatgtggttattataaaaattaagtgga----aaaatctatgtaaatgattaatatgatgcctggt-cacgaaagtcctcaata---aataactgctatttatGGAAGTCTTATGCCCAGTTTTTCTCATGCTGTC-ATTTGGCAGCTCAGCCTCTATGTCAAAAAGCCAACAATAAAAGCAGGTTGTTGGCACCATCAAATTGTTCACAATC-GTATTCCTATTTGTTCTAACCCATCTAACTCACAGATCCC-AGtctattcctgatactt----tggcttttttacttcaatttgtattcctatttctGGGCTCAC-TTTAACCTCA--AACATGTT--GAGTATTGCCTTTCCAGTTGCATGTCCCCTTCTCAACCAAAATCTG--CTTATCACCTTAAGTATTTATTATACTT-TAAGCCACTCTGGACAAATTGTTTACCCAGAGTACCAAAGCACTCAGTATCCTATTCTTCCTAAAAGCAAATAATGAAATCAAAACA-----AGTC-GGACTTTAG-AAAGAATTATGAT---------AAAAAAGCTtacaaccttacaagggactactaggcagccatg--aaatgatgcagcagacatagttaatggcatgaaaagatgtgtgtaataaagtaggg-----------ctgagctggag-------gcattttacaaaagtttgcacaatatgattgacatcttgtaaggaatttt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198394531 825 + 210400635 CCATG-AAAAAAGAATGAAGA---------TAAATGACAGCATAAAATGACAGCTTTGGGAGTTTTAACAAATTTGGTTCCAATCAAAGTATttggtcaagttattttaaatctcactgtcagtttccacttctttaaaa--agga---aaa------ctagtgtatctaa-tgcatgtggttattataaaaattaaatggg----gaaatgcatgtaaatgattaatatgatgcctggt-catgaaggtcctcaaaaaatagtaactgctatCTATGGAAGTCTTATGCCCAATTTTTCTCATACTGTC-ATTCAGCAGCTCAGCCTCTATGTCAAAAAGCCAACAGTAAAAGCAGGTTGTTTGTGCCACCAAATTGTTCACAATC-GTATTCCTATTTGTTCTAACCCATCTAACCTA-AGATCCC-AGTCTATTCCTGATAATT---CTGGCCTTTTAGCTTCAATTTGTTTTCTTATTTCTGGGCTCAC-TTTAACCTCA--AACATGTT--TAGAACTGCCTTTCCAGTTCCACATCTCATTCTCAACCAAAATCTG--CTTATCGCCTTAATT----ATTATACTG-TAAGCCACTCTGGATAAATTGTTTACCCAGATAACCAAAGCATTCAGTATCCTATTCTTTCTAAAAGCTTATCATGAAATCAAAACA-----ACCTAAGACTTTAG-AAAGAATTATGATTAAAACAAAACAAAACCTTACAACCTTACAAGGGACTACTAGGCAGGCACG--AAATAATCCTGCAGACATAGTTAATTGCATGAAAAGATGTTCATAATAAAGTAGGG-----------CTAAATTGGAG-------GCATTTTATAACAGTTTACACACTA----TGACATCTTGTAAAGAAtttt i calJac3.chr1 C 0 I 282 s mm10.chr15 77218676 747 + 104043685 CCACCTAAGAGCAAATGAATA---------TA------------------------TGGGTGCTTCAACTCTTGAGG-----GCCAAGAGCCAAGATTGAGTCTTTTTAACACTCCCTTTCAGCTCCCACTTCTGTAAATTGGAAACGCCAC------CTAACACAGTTAA-TATATGTAGCTATAACAAAAGTTAAACAAACAACAAAGTCTATGTGAATAATTACTATGGTGTCTATCACCCGAAAGTACTCGATA-ATAAAATC----AATTATAGAAACTGTGCACCCAGTTTTT---ATGTCACCTAACCAGCAGGTTGGCCTCCGTGTCGAAAAGCCGGTGATAAAAGCAATTTACTGG----ACCAAGCTGCTCATAACC-ACA-TCCTAGATGACCCAACCCAGTTTGCTC--AGGTCCA-GGGGGATACTGGGTACTA---CTGGTATGCT--CTTCAATTTATTTTCCTATTTTCCAAGTCACTTTTGACCTCA--AACATGCTAAAAGAACTGCCTCTCCAACTTTCCATTCCCTCCTCTACCACCATCTGTATTTATCATCTTAATT----ATGACACTTCTAAGTCACCCTGAATTACT--ATTGCCCAGTG-----AAGCACTAA------TAATCTTCCT--AAGTGTATCATGAA---AACTTA-----AGAT-TGACAT------AGAATTACA-----------GGGGAACTTGATACTCTCACA---GAATACTAGGAAGCTATT--AAATAA-----AATCTGTAGTTAATAACATGAAAAGAAATTTCCGGTAGAGTAGAC-----------TTGAGCTGGAA-------GTCTATTTCAA------------TACAACTGACATTCAGGGAAAATTTTT i mm10.chr15 C 0 I 2 s canFam3.chr10 41006542 799 - 69331447 tcatgaataaataaataaataaaatctttttaaaaaaaaTAAAGGAAGCCCAGGTTTGGGAGTTTCAACACATCTTGCATT--CCAAAGTACTTga-caagtaactctg---tccactctcggttcccacttctgtaaaatgggca---aaacaccatcagatgcatctag-cgcatgcagttgttataaaagctaaatgtg----aagctccatgtaaataattaatatgatgcctggcacacagaa-------------gataactgttatttatAGAAGTCTTATACCCAGTTTTT-TCATGCTATC-ATCCAGTAGATCACGCTCTATGTCAAAAAGGCAGCAATAAAAGCAGGCCATTGGTGC---CAAGATGTT-ACCATC--TTTCTCACTTTGTTCTAAGCCATCGCAGCCACAGATCCCTAGTCCATTCCTAGTACTTATTCTCAATTATTTACTTCAATTTGTTTTTCTGTTTCTGGACTCAT-TTTAACCTCAATATCTGGCT--TAGTATTGCCCCTCTAGTTCCATGTTCCCTCCTCAAACATAATCTGTATTTACCACTTTTGCT----ATAACATGT-TAAGCCACTC---------------------ACAGCACAGCACTCAGTATCTCATTCCTTCTAAAAGCCTACCATGGAATCAAAACAACTTCAGAC-AAACTTTAGAAAAGAATTAGGAT---------GGAAA----------CTTACAAGGGAATCCTAGACAGCCATGAAAAATATTACTGTGAAAATGGCTAATGGCATGAAAAGATATTTATAATACATTGGTGAATTTACTTACTTGAGAGAGAGAGTGTGTGTGTGTTAT----GTGTACACAAACAGA----------GGGAGGGA---- i canFam3.chr10 I 110 C 0 a score=112595.000000 s hg38.chr22_KI270876v1_alt 241854 49 + 263666 aaaatgtgtatatatgcaaacagagttacgctgaaacaagataatcaac s panTro4.chr22 34622065 49 + 49737984 aaaatgtgtatatatgcaaacagagttacgctgaaacaagataatcaac i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31041873 49 + 46535552 aaaatgtgtatatatgcaaacagagttacactgaaacgagataatcaac i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100595829 49 - 115148730 AAAATGTGTATATATGCAAACGGAGTTATACGGAAACAAGATAATCAAC i nomLeu3.chr7b C 0 M 3451 s rheMac3.chr10 80739965 49 + 95678458 aaaatgtgtacatatgcaaacaaagctgcactgaaacaagataataaac i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81166506 49 - 96509753 aaaatgtgtacatatgcaaacaaagctgcactgaaacaagataataaac i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76422640 49 + 90941950 aaaatgtgtatatatgcaaaCAAAGTTGCACTGAAACAAGATAATAAAC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18691283 49 + 33263144 aaaatgcgtatatatgcaaacaaagttggactgaaacaagataataaac i chlSab2.chr19 C 0 C 0 s mm10.chr15 77219425 44 + 104043685 TAAATGTGCATATACACAGA-GCAGCTGCATACAAACAAGACCAG---- i mm10.chr15 I 2 C 0 s canFam3.chr10 41007341 49 - 69331447 CAGAGGAAGAGAAACCCAAGCTGACTCCCCACCAAGCAGGGAACCCAGC i canFam3.chr10 C 0 C 0 e calJac3.chr1 198395356 282 + 210400635 I a score=27315.000000 s hg38.chr22_KI270876v1_alt 241903 15 + 263666 ---aacaaaacgttaaga s panTro4.chr22 34622114 15 + 49737984 ---aacaaaacgttaaga i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31041922 15 + 46535552 ---aacaaaacgttaaga i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80740014 15 + 95678458 ---aacaaaacgttaaga i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81166555 15 - 96509753 ---aacaaaacgttaaga i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76422689 15 + 90941950 ---AACAAAACGTTAAGA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18691332 15 + 33263144 ---aacaaaacgttaaga i chlSab2.chr19 C 0 C 0 s mm10.chr15 77219469 15 + 104043685 ---AACAATGAATAGAAA i mm10.chr15 C 0 C 0 s canFam3.chr10 41007390 15 - 69331447 ACCACCCAAGCATCC--- i canFam3.chr10 C 0 C 0 e calJac3.chr1 198395356 282 + 210400635 I e nomLeu3.chr7b 100595878 3451 - 115148730 M a score=266372.000000 s hg38.chr22_KI270876v1_alt 241918 100 + 263666 taaagttaaatatattaaggcagattttattctattcttttgatctgctgtatattctaaattttcttcaatgaatgcaaattacttttg--------tttt-aaaaaa- s panTro4.chr22 34622129 100 + 49737984 taaagttaaatatattaaggcagattttattctattcttttgatctgctgtatattctaaattttcttcaatgaatgcaaattacttttg--------tttt-aaaaaa- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31041937 98 + 46535552 taaagttaaatatattaaggcagattttattctattcttttgatctgctgtata---taaattttcttcaatgaatgcaaattactttta--------ttttaaaaaaa- i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80740029 100 + 95678458 taaagttaactatattaaggcaaattttattctattcttttgatctgctgtatattctaaattttctttaacgaatgtgtattactttta--------tttt-taaaaa- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81166570 100 - 96509753 taaagttaactatattaaggcaaattttattctattcttttgatctgctgtatattctaaattttctttaacgaatgtgtattactttta--------tttt-taaaaa- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76422704 100 + 90941950 TAAAGTTAACTATATTAAGgcaaattttattctattcttttgaTCTGCTGtatattctaaattttctttaacgaatgcgtattactttta--------tttt-taaaaa- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18691347 100 + 33263144 taaagttaactatattaaggcaaattttattctattcttttgatctgctgcatattctaaattttctttaacgaatgcgtattactttta--------tttt-taaaaa- i chlSab2.chr19 C 0 I 531 s calJac3.chr1 198395638 95 + 210400635 TAAAGTTAAATATATTAAGGCAAATTTTATTCTATTCTTCTGATCTGCTGTATATTCTAAATTTTCTTTGATGAATGCATGTAACTTTT--------------AAAAAA- i calJac3.chr1 I 282 C 0 s mm10.chr15 77219484 81 + 104043685 ---CATTGAACATGCTAGGGGAAGTTTTATTTTA-TCTTTTGATCTATTATGTACTATATATTTTCTTTGATGGATGTGTACTGC------------------------- i mm10.chr15 C 0 C 0 s canFam3.chr10 41007405 109 - 69331447 CAAAGTGAAATATATTAAGGCCATTTTTGTTATATTCTTATGGTCTGCTGTATCTTCTCAATTTTTCTCAATGAACATATATTACTTTCAAGAAAAAGATTT-TAGAGAT i canFam3.chr10 C 0 C 0 e nomLeu3.chr7b 100595878 3451 - 115148730 M a score=36845.000000 s hg38.chr22_KI270876v1_alt 242018 11 + 263666 aTATTTTAAGG s panTro4.chr22 34622229 11 + 49737984 aTATTTTAAGG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31042035 11 + 46535552 aTATTTTAAGG i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80740129 11 + 95678458 aTATTTTAAGG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81166670 11 - 96509753 aTATTTTAAGG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76422804 11 + 90941950 atattttaagg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18691978 11 + 33263144 ATATTTTAAGG i chlSab2.chr19 I 531 C 0 s calJac3.chr1 198395733 11 + 210400635 ATATTTTAAGG i calJac3.chr1 C 0 C 0 s mm10.chr15 77219565 8 + 104043685 ---TTTTAAAG i mm10.chr15 C 0 C 0 s canFam3.chr10 41007514 11 - 69331447 ATTTTTAAAAG i canFam3.chr10 C 0 I 136 e nomLeu3.chr7b 100595878 3451 - 115148730 M a score=842856.000000 s hg38.chr22_KI270876v1_alt 242029 304 + 263666 ACTTTTAAAAAAGAATTAATTTAAAGATTGCAACGCCTCTTAGCATTTTCTTACCAGCCACTATA-----GTATggctcaggagtcagaaaaaccagggttcaaatccctattctaccacttattctatgtacgactttggcaaatcacttaatgcttttaaggcttgctgttctcatgtggaa------aatgaagaGGAAACTCCTAGCCAAGTACTTGGCACATAGTCTTCCATAAATACCAGTGCCCTTAACTCTTCCACTCCTTTACCCTATGAcagtggt--tctcaagttgagtgtgtataagaattacc s panTro4.chr22 34622240 304 + 49737984 ACTTTTAAAAAAGAATTAATTTAAAGATTGCAATGCCTCTTAGCATTTTCTTACCAGCCACTATA-----GTATggctcaggagtcagaaaaaccagggttcaaatccctattctaccacttattatatgtacgactttggcacatcacttaatgcttttaaggcttgctgttctcatgtggaa------aatgaagaGGAAACTCCTAGCCAAGTACTTGGCACATAGTCTTCCATAAATACCAGTGCCCTTAACTCTTCCACTCCTTTACCCTATGAcagtggt--tctcaagttgagtgtgtataagaattacc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31042046 303 + 46535552 ACTTTTGAAAAAGAATTAATTTAAAGATTGCAATGCCTCTTAGCATTTTCTTACCAGCCACTATA-----GTATggctcaggagtcggaaaaaccagggttcaaattcctattctaccacttattatatgtacgactttggcaaatcacttaacgctttt-aggcttgctgttctcatgtggaa------aatgaaaaGGAAACTCCTAGCCAAGTACTTGGCACGTAGTCTTCCATAAATACCAGTGCCCTTAACTCTTCCACTCCTTTACCCTATGGcagtggt--tctcaagttgagcgtgtataagaattacc i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80740140 308 + 95678458 ACTTTTAAAAAAGAATTAATTTAAAGATTGTAATGTCTCTTAGCATTTTCTTACCAGCCACTATAGTATGGTATggctcaggagtcagaaaaaacagggttcaaatccttattctaccacttattgtatgtacgactttggcaaatcacttaatgctttt-aggcttgctgttctcatgtggaa------aatgaagaGGAAACTCCCAGCCAAGTACTTGGCATGTAGTCTTCCATAAATACCAATGCCCTTAACTCTTCCACTCCTTTACCCTATAGcagtggt--tctcaagttgagtgtgtataagaattacc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81166681 308 - 96509753 ACTTTTAAAAAAGAATTAATTTAAAGATTGTAATGTCTCTTAGCATTTTCTTACCAGCCACTATAGTATGGTATggctcaggagtcagaaaaaccagggttcaaatccttattctaccacttattgtatgtacgactttggcaaatcacttaatgctttt-aggcttgctgttctcatgtggaa------aatgaagaGGAAACTCCCAGACAAGTACTTGGCATGTAGTCTTCCATAAATACCAATGCCCTTAACTCTTCCACTCCTTTACCCTATAGcagtggt--tctcaagttgagtgtgtataagaattacc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76422815 308 + 90941950 acttttaaaaaagaattaatttaaagATTGTAATGTCTCTTAGCATTTTCTTACCAGCCACTATAGTATGGTATGGCTCAGGAGTCAGAAAAACCAGGGTTCAAATCCTTATTCTACCACTTATTACATGTACGACTTTGGCAAATCACTTAATGCTTTT-AGGCTTGCTGTTCTCATGTGGAA------AATGACGAGGAAACTCCCAGCCAAGTACTTGGCATGTAGTCTTCCGTAAATACCAATGCCTTTAACTCTTCCACTCCTTTACCctatagcagtggt--tctcaagttGAGTGTGTGTAAGAATTACC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18691989 308 + 33263144 ACTTTTAAAAAAGTATTAATTTAAAGATTGTAATGTCTCTTAGCATTTTCTTACCAGCCACTACAGTATGGTATggctcaggagtcagaaaaaccagtgttcaaatccctattctaccacttattatatgtacgactttggcaaatcacttaatgctttt-aggcttgctgttctcatgtggaa------aatgaagaGGAAACTCCCAGCCAAGTACTTGGCATGTAGTCTTCCGTAAATACCAATGCCCTTAACTCTTCCACTCCTTTACCCTATAGcagtggt--tctcaagttgagtgtctataagaattacc i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198395744 298 + 210400635 ACTTTTAAAAAAGAA-----TTAAAGAGTGCAATGCCTCTTAGCCTTTTCTTACCAGCCACTACA-----GTATggctcaggagtcagaaaaaacagggttcaaatccctattctaccacttattatacgtatggctttggcaaatcacttaatgctttt-aggcttggtgttctcatctggaa------aatgaagaGGAATCTCCTAGCCAAGTACTTGGCATGTGGTCTTCCGTAAATACCAATGCCCTTAACTCTTCCACTCCTTTTCCCTATGGcagtggt--tctcaagttgagtgtgtatgagaatcacc i calJac3.chr1 C 0 C 0 s mm10.chr15 77219573 260 + 104043685 ACTTT----AAACTATTAATTCAATGACT-------------------------CAGCAACTAGC-----ACATGGCT-GTGAATCACAAGGA-CAGGGCTCAGAGTTC--TCCCACCACCTACCATAC--ACAAC--TGACAAATGAGTACATGTTTCT-AGGCTTGGAATCTGTGACTGGAA------AGTGAAGGGGAAACTCCTGGCTGAGTACTTGGCA-GTGCCCTCCAATAAAGATCAG---CCTGTGTTCTGCTATCCCTTCTCC----AACAATGGCTGTCCCTCGGtgagtgtgaaccagaatgccc i mm10.chr15 C 0 I 3 s canFam3.chr10 41007661 255 - 69331447 aatcttgtaaaaaaaTGAATTTAA-----GTAATACCTCTTAGAATTTTCTTTGCAGACACTGTa-----gcatggctctggagtcagaaagactaggagtcaaattcctaatttaccacttaataTACATATG--------AAATTA---------TTT-AGGCTTGGTGTTCCCATATGAAAAGTAGCAATGAAGATGAACACCCTAGCACAGTGCTTGGCACGTGCTATTCAGGAAGTCCTA--------------------------------GGcagtggt--tctcagcttgagtgtgcatcagaatcacc i canFam3.chr10 I 136 I 3 e nomLeu3.chr7b 100595878 3451 - 115148730 M a score=1333782.000000 s hg38.chr22_KI270876v1_alt 242333 394 + 263666 aaagcatg-ttaaaa-cagattactggacccca-tcctcagagtttctgattcagtaagtctggggaagaggcag--agaccatgaataaaggtaagttcccaggtgatgctgatgcggctggatttg-aagccacactttgagga-tactgCTCTAGGCAATAAGACTTACAAAGTCTTCTTACAACATGTTATACAGGTATGAAGTGCTCTTTCACATCAAAAGTATTTCAGGAATACATGCTCACTGGATACTGAATTAAATTAGAAGCTAATACTGCACATCCACCCAAAAGGCCA-ACCTTACAACATGGGATAATTCACCCCAGCACATTGAGGGAATTGGTCTTCCACTTAAAGCAGTCAGCAAATAACAATTATTAACACTGCATTTAGAATAT s panTro4.chr22 34622544 394 + 49737984 aaagcatg-ttaaaa-cagattactggacccca-tcctcagagtttctgattcagtaagtctggggaagaggcag--agaccatgaataaaggtaagttcccaggtgatgctgatgcggctggatttg-aagccacactttgagga-tactgCTCTAGGCAATAAGACTTACAAAGTCTTCTTACAACATGTTATACAGGTATGAAGTGCTCTTTCACATCAAAAGTATTTCAGGAATACATGCTCACTGGATACTGAATTAAATTAGAAGCTAATACTGCACATCCACCCAAAAGGCCA-ACCTTACAACATGGGATAATTCACCCCAGCACATTGAGGGAATTGGTCTTCCACTTAAAGCAGTCAGCAAATAACAATTATTAACACTGCATTTAGAATAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31042349 394 + 46535552 aaagcatg-ttaaaa-cagattactggacccca-tcctcagagtttctgattcagtaagtctggggaagaggcag--agaccatgaataaaggtaagttcccaggtgatgctgatgcggctagatttg-aagccacactttgagGA-TACCGCTCTAGGCAATAAGACTTACAAAGTCTTCTTACAACACGTTATTCAGGTATGAAGTGCTCTTTCACATCAAAAGTATTTCAGGAATACATGCTCACTGGATACTGAATTAAATTAGAAGATAATACTGCACACCTACCCAAAAGGCCA-ACCTTACAACATGGGATAATTCACCCCAGCACATTGAGGGAACTGGTCTTCCACTTAAAGCAGTCAGCAAATAACAATTATTAACACTGCATTTAGAATAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100599329 393 - 115148730 AAAGCATG--Taaaa-cagattactggacccca-tcctcagagtttctgattcagtaagtctggggaagaggcag--agaccatgaagaaaggtaagttcccaggtgatgctgatacaactggatttg-aagccacactttgagGA-TACCGCTCTAGGCAATAAGACTTACAAAGTCTTCTTACAACATGTTATACAGGTATGAAGTGCTCTTTCACATCAAAAGTATTTCAGGAATACATGCTCACTGGATACTGAATTAAATTAGAAGCTAATACTGCACACCTACCCAAAACGCCA-ACCTTACAACATGGGATAATTCACCCCAGCACATTGAGGGAATTGGTCTTCCACTTAAAGCAGTCAGCAAATAACAATTACTAACACTGCATTTAGAATAT i nomLeu3.chr7b M 3451 C 0 s rheMac3.chr10 80740448 391 + 95678458 agcgcatg-ttaaaa-cagattgctggacccca-tcctcagagtttcggattcagtaagtctggggaaaaggcag--agaccatgaataaaggtaagttcccaggtgatgctgatgtggctgggtttg-aagccacactttgagga-taccactCTAGGCAATAAGACTCACAAAGTCTTCTTACAACATGTTATACAGGTATTAAGTGCTCTTTCACATCAAAAGTATTTTAGCAATACATGCTCACTGGATACTGAACTAAATTAGAAGCTAATACTGAACACCTCCCCAAAAGGCCA-GCCTTACAACATGGGATAATTTACCCCAGGACATTAAGGGAATTGGTTTTCCACTTAAAGCAGTCAGGAAATAACAAT---TAACACTGCATTTAGAATAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81166989 391 - 96509753 agcgcatg-ttaaaa-cagattgctggacccca-tcctcagagtttcggattcagtaagtctggggaaaaggcag--agaccatgaataaaggtaagttcccaggtgatgctgatgtggctgggtttg-aagccacactttgagga-taccactCTAGGCAATAAGACTCACAAAGTCTTCTTACAACATGTTATACAGGTATTAAGTGCTCTTTCACATCAAAAGTATTTTAGGAATACATGCTCACTGGATACTGAACTAAATTAGAAGCTAATACTGAACACCTCCCCAAAAGGCCA-ACCTTACAACATGGGATAATTTACCCCAGGACATTAAGGGAATTGGTTTTCCACTTAAAGCAGTCAGGAAATAACAAT---TAACACTGCATTTAGAATAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76423123 371 + 90941950 AGC----------------------GGACCCCA-TCCTCAGAGTTTCggattcagtaagtctggggaAAAGGCAG--AGACCATGAATAAAGGTAAGTTCCCAGGTGATATTGATGCGGCTGGGTTTG-AAGCCACACTTTGAGGA-TACCACTCTAGGCAGTAAGACTCACGAAGTCTTCTTACAACATGTTATACAGGTATTAAGTGCTCTTTCACATCAAAAGTATTTTAGGAATACATGCTCACTGGATACTGAACTAAATTAGAAGCTAATACTGAACACCTCCCCAAAAGGCCA-ACCTTACAACATGGGATAATCTACCCCAGGACATTGAGGGAATTGGTTTTCCACTTAAAGCAGTCAGGAAATAACAAT---TAACACTGCATTTAGAATAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18692297 390 + 33263144 agcgcatg-ttaaaa-cagattgctggacccca-tcctcagagttttggattcagtaagtctggggaaaaggcag--agaccatg-ataaaggtaagttcccaggggatgctgatgcggctgggtttg-aagccacactttgagga-taccactCTAGGCAATAAGACTCACAAAGTCTTCCTACAACATGTTATACAGGTATTAAGTGCTCTTTCACATCAAAAGTATTTTAGGAATACATGCTCACTGGATACTGAACTAAATTAGAAGCTAATACTGAACACCTCCCCAAAAGGCCA-ACTTTACAAGATGGGATAATTCACCCCAGGACATTGAGGGAATTGGTTTTCCACTTAAAGCAGTCAGGAAATAACAAT---TAACACTGCATTTAGAATAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198396042 394 + 210400635 agagcatgataaaaa-cggattgctggacccca-ttctcagagtttctgattcagtaggtctggggaagaggcag--agaccatgaacaaaggtaagttgccaggtgatgttgatgctgctgggtttg-aagccacattttgagga-cactgCTCTAGGCAGTAAGACGTACAAAGTCTTCTTACAACATGTTATACAGGTATTAAGTGCTCTTTCACATCAATAGTATTTCAGGAATATGTGCTCATTGGATACTGAATTAAATTAGAAGCTAATACTGCACAT-TATTCAAAAGCCCA-ACTTTACAACATGGGATAATTTACCCTAGGACACTGAGGGAATTGGTTTCCTACTTAAGGCAGTCTGTAAATAACAATCATTAACACTGCATTCACAATAT i calJac3.chr1 C 0 C 0 s mm10.chr15 77219836 305 + 104043685 agagcatg-ctggaa-tgggttgctggaccaca-tcctcttaatttctggttcagtaagcctggg----aggcaggaagacca----------taagctcccaggtggtgctgaaactgctggcccaa-aagccac-------------ccaccaaagaccattTGACACACAGACTAT-------------------------AAGGGCCTTTTTAGATCACTGTTATTTCAGGGCTACTTCCTTACTGGATATGAAATAATGTCTATAACAGAT--------------CTAAATAACA-GATCTACAGTGTAGGATAAAACACCTCAGGACACTCTAAGAACTGGGTTTCTAC-TAAAGTGGGCAAGAAACAA-------------------------AG i mm10.chr15 I 3 C 0 s canFam3.chr10 41007919 367 - 69331447 aaagcatt-ctgaaatcagaaggctgggcccccttccccaaagcttctgctttggtaggtctgagg--gagggag--agaccacaaatttat-taagttcccaggtgatgctgacgctgctggtctggcaaaccacactttgagaaccacAGCTCCAG-TAATAAA----ACAAAGTGTCCTTACAATATGCTACACAGAT------TGCTCTGTCA-----------------GGATATCTGCTCCCTGGAGATTGAATTAAACTAGAACCTGATTCTGCACATTCCCCCAAAAGCCTAGGCTTCATAGCATAAGAAAGTTCACTCTAAGACATTGAGGGAACTGGTTTTCCACTTAAGGT-GAAAGGAAATAAGAATTATTAGGACTACATTTAAAATAT i canFam3.chr10 I 3 I 349 a score=2997.000000 s hg38.chr22_KI270876v1_alt 242727 1 + 263666 T s panTro4.chr22 34622938 1 + 49737984 T i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31042743 1 + 46535552 T i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100599722 1 - 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80740839 1 + 95678458 T i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81167380 1 - 96509753 T i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76423494 1 + 90941950 T i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18692687 1 + 33263144 T i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198396436 1 + 210400635 T i calJac3.chr1 C 0 C 0 s mm10.chr15 77220141 1 + 104043685 C i mm10.chr15 C 0 C 0 e canFam3.chr10 41008286 349 - 69331447 I a score=1976822.000000 s hg38.chr22_KI270876v1_alt 242728 551 + 263666 CTGGTTCCAGCATGGG-AGAAAACA--TGAGAATGCAGACACAGATCAGAC-AAATG-AAGAGATGGACAAGAGAATCCACTGCAAGAAGTTCTGTGCCTGTCTGGTAAATTCATCTGGGGCAGAGGGGCAGATTCTGTTGTGTCACAGAACACTTGCTTTGCTCTGGGTGCCCTCTGTTGACAAAAACTGACATAGCCACTT--CCTT---CCCTCCCTTTTCTCCTCCCACCCT---AGGG--CCAAGAGTCCCACTAGTGTGACTCAGACTTGAGGCAAGGTTTCCAGTTAGAAAATTTTCCTAAGCCCATATGTAGGCAAGACAGACCTTTCCTTCCTCCAGCTTTCCTAAGTCCCCTTCTCTGTGTGCTTG-TATCTGC---AGCTTATCTCCAAACAGGTTAATTGTTTCAGGACCATGGAACAAAAAGTGAACAGCATTTAGCATAATGA-TATGTGAAATTTAAATCACAATTGCATTTCATTTTAGAAATGGC--TAGTATTCACACAGAGGGAATAAACTGAGTTTGTAAATAGTGTCAAATACAATGTGAAACTCTGTTGGT s panTro4.chr22 34622939 551 + 49737984 CTGGTTCCAGCATGGG-AGAAAACA--TGAGAATGCAGACACAGATCAGAC-AAATG-AAGAGATGGACAAGAGAATCCACTGCAAGAAGTTCTGTGCCTGTCTGGTAAATTCATCTGGGGCAGAGGGGCAGATTCTGTTGTGTCACAGAACACTTGCTTTGCTCTGGGTGCCCTCTGTTGACAAAAACTGACATAGCCACTT--CCTT---CCCTCCCTTTTCTCCTCCCACCCT---AGGG--CCAAGAGTCCCTCTAGTGTGACTCAGACTTGAGGCAAGGTTTCCAGTTAGAAAATTTTCCTAAGCCCATATGTAGGCAAGACAGACCTTTCCTTCCTCCAGCTTTCCTAAGTCCCCTTCTCTGTGTGCTTG-TATCTGC---AGCTTATCTCCAAACAGGTTAATTGTTTCAGGACCATGGAACAAAAAGTGAACAGCATTTAGCATAATGA-TATGTGAAATTTAAATCACAATTGCATTTCATTTTAGAAATGGC--TAGTATTCACACAGAGGGAATAAACTGAGTTTGTAAATAGTGTCAAATACAATGTGAAACTCTGTTGGT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31042744 552 + 46535552 CTGGTTCCAGCATGGC-AGAAAACA--TGAGAATGCAGACACAGATCAGACAAAATG-AAGAGACAGACAAGAGAATCCACTGCAAGAAGTTCTGTGCCTGTCTGGTACATTCATCTGGGGCAGAAGGGCAGATTTTGTAGTGTCACAGAACACTTGCTTTGCTCTGGGTGCCCTCTGTTGACAAAAACTGACATAGCCACTT--CCTT---CCCTCCCTTTTCTCCTCCCACCCT---AGGG--CCAAGAGTCCCTCTAGTGTGACTCAGACTTGAGGCAAGGTTTCCAGTTAGAAAATTTTCCTAAGCCCATATGTAGGCAAGACAGACCTTTCCTTCCTCCAGCTTTCCTAAGTCCCCTTCTCTGTGTGCTTG-TATCTGC---AGCTTATCTCCAAACAGGTTAATTGTTTCAGGATTGTGGAACAAAAAGTGAACAGCATTTAGCATAACGA-TATGTGAAATTTAAATCACAAGTGCATTTCATTTTAGAAATGGC--TAGTATTAACACGGAGGGAATAAACTGATTTTGTAAATAGTGTCAAATACAATGTGAAACTCTGTTGGT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100599723 553 - 115148730 CTGGTTCCAGCATGGG-AGAAAACA--TGAGAATGCAGACACAGATCAGACAAAATG-AAGAGATAGACAAGAGAATCCCCTGCAAGAAGTTCTGTGCCTGTCTGGTAAATTCATCTGGGGCAGAAGGGCAGATTCTGTAGTGTCACAGAACACTTGCTTTGCTCTGGGTGCCCTCTGTTGACAAAAACTGACATAGCCACTT--CCTT---CCCTCCCTTTTCTCCTCCCACCCT---AGGG--CCAAGAGTCCCTCTAGTGTGACTCAGACTTGAGGCAAGGTTTCCAGTTAGAAAATTTTCCTAAGCCCATATGTAGGCAAGACAGACCTTTCCTTCCTCCAGCTTTCCTAAATCCCCTTCTCTGTGTGCTTGTTATCTGC---AGCTTATCTCCAAATAGGTTAATTGTTTCAGGATGGTGGAACAAAAAGTGAACAGCATTTAGCATAATGA-TATGTGAAATTTAAATCACAATTGCATTTCATTTTAGAAATGGC--TAGTATTAACACAGAAGGAATAAATTGATTTTGTAAATAGTGTCAAATACAATGTGAAACTCTGTTGGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80740840 548 + 95678458 CTGGTTCCAGCATGGG-AGAAAACA--TGAGAATGCAGACACAGATCAAACAAAATG-AAGAGCTAGACAAGAGAATCCACTGCAAGAAGTTCTGTGA----CTGGTAAATTCATCTGGGGCAGAAGAGCAGATTCTATAGTGTCACAGAACACTTGCTTTGCTCTGGGTGCCCTCTGTTGACAAAAACTGACATAGCCACTT--CCTT---CCCTCCCTTTTCTCCTCCCACCCT---AGGG--CCAAGAGTCCCTCCAGTGTGACTCAGACTTGAGGCACGGTTTCCAGTTAGAAAATTTTCCTAGGCCCATATGTAGGCAAGACAGACCTTTCCTTCCTCCAGCTTTCCTAAGTCCCCTTCTCTGTGTGCTTG-TATCTGC---AGCTTATCTTCAAACAGGTTAATTGTTTCAGGATTGTGGAACAAAAAGTGAACAGCATTTCGCATAATGA-TATGTGAAATTTAAATCACAATGGCATTTCATTTTAGATATGGC--TAGTATTAGCGCAGAGAGAATAAACTGATTTTGTAAATAGTGTCAAATACAATGTGAAACTCTGTTGGT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81167381 548 - 96509753 CTGGTTCCAGCATGGG-AGAAAACA--TGAGAATGCAGACACAGATCAAACAAAATG-AAGAGCTAGACAAGAGAATCCACTGCAAGAAGTTCTGTGA----CTGGTAAATTCATCTGGGGCAGAAGAGCAGATTCTATAGTGTCACAGAACACTTGCTTTGCTCTGGGTGCCCTCTGTTGACAAAAACTGACATAGCCACTT--CCTT---CCCTCCCTTTTCTCCTCCCACCCT---AGGG--CCAAGAGTCCCTCCAGTGTGACTCAGACTTGAGGCACGGTTTCCAGTTAGAAAATTTTCCTAGGCCCATATGTAGGCAAGACAGACCTTTCCTTCCTCCAGCTTTCCTAAGTCCCCTTCTCTGTGTGCTTG-TATCTGC---AGCTTATCTTCAAACAGGTTAATTGTTTCAGGATTGTGGAACAAAAAGTGAACAGCATTTCGCATAATGA-TATGTGAAATTTAAATCACAATGGCATTTCATTTTAGATATGGC--TAGTATTAGCGCAGAGAGAATAAACTGATTTTGTAAATAGTGTCAAATACAATGTGAAACTCTGTTGGT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76423495 548 + 90941950 CTGGTTCCAGCATGGG-AAAAAACA--TGAGAATGCCGACACAGATCAAACAAAATG-AAGAGCTAGACAAGAGAATCCACTGCAAGAAGTTCTGTGA----CTGGTAAATTCATCTGGGGCAGAAGGGCAGATTCTATAGTGTCACAGAACACTTGCTTTGCTCTGGGTGCCCTCTGTTGACAAAAACTGACATAGccactt--cctt---ccctcccttttctcctcccaccct---AGGG--CCAAGAGTCCCTCCAGTGTGACTCAGACTTGAGGCAAGGTTTCCAGTTAGAAAATTTTCCTAGGCCCATATGTAGGCAAGACAGACCTTTCCTTCCTCCAGCTTTCCTAAGTCCCCTTCTCTGTGTGCTTG-TATCTGC---AGCTTATCTTCAAACAGGTTAATTGTTTCAGGATTGTGGAACAAAAAGTGAACAGCATTTAGCATAATGA-TATGTGAAATTTAAATCACAATGgcatttcattttagaaatggc--TAGTATTAGCGCAGAGAGAATAAACTGATTTTGTAAATAGTGTCAAATACAATGTGAAACTCTGTTGGT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18692688 548 + 33263144 CTGGTTCCAGCATGGG-AAAAAACA--TGAGAATGCAGACACAGATCAAACAAAATG-AAGAGCTAGACAAGAGAATCCACTGCAAGAAGTTCTGTGA----CTGGTAAATTCATCTGGGGCAGAAGGGCAGATTCTATAGTGTCACAGAACACTTGCTTTGCTCTGGGTGCCCTCTGTTGACAAAAACTGACATAGCCACTT--CCTT---CCCTCCCTTTTCTCCTCCCACCCT---AGGG--CCAAGAGTCCCTCCAGTGTGACTCAGACTTGAGGCAAGGTTTCCAGTTAGAAAATTTTCCTAGGCCCATATGTAGGCAAGACAGACCTTTCCTTCCTCCAGCTTTCCTAAGTCCCCTTCTCTGTGTGCTTG-TATCTGC---AGCTTATCTTCAAACAGGTTAATTGTTTCAGGATTGTGGAACAAAAAGTGAACAGCATTTAGCATAATGA-TATGTGAAATTTAAATCACAATGGCATTTCATTTTAGAAATGGC--TAGTATTAGTGCAGAGAGAATAAACTGATTTTGTAAATAGTGTCAAATACAATGTGAAACTCTGTTGGT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198396437 520 + 210400635 CTGGTTCCAGCATGGG-AGAAAACA--TGAGAATGCAGACACAGATCAAACAAAATGCAAGAGACAGACAAGAGAAT-CACTGCAAGAAGTTCTGTGCCTGTCAGGTAAATTCACCT-GGGCAGA-GGGCAGATTCTGTAGTGTCACAGAGCACTTGCTTTGCTCTGGGTGCCCTCTGTTGACAAAAACTGACATAACCACTT--CCTT---TCCTCCCTTTTCTCCTCCCACCCT---AGGG--CCAAGAG-----CAGGACTCAGACAGACTTGAGGCATGGTTTCCGGTTAGAAAATTTT-CTAAGCCCATGTGTAGGCAAGGCAGACCTTTCCTTCCTCCAGCTTTCCTAAGTCTCCTTCTCCGTGTGTCTG-TATCTGC---AGCTTATCTCCAAACAGGTTAATTATTTCAGGATTGTGGAACAAAAAGTGAACAGCATTTAGCATAATGA--ATGTGAAATTTAAATCACAATTGC-------------------------ATTAGCACAGAGGGAATAAACTGATTTTGTAAGTAGTGTCAAACACAATGTGAAACTCTGTTGGT i calJac3.chr1 C 0 C 0 s mm10.chr15 77220142 472 + 104043685 CAAATTCTAATGTGGGTAAAAAACATCTGAGAATGTTAAGGCAGATCAAAGAAAATG-CA-------ACTTG----TCCAGGGCAAGCAGCTCTGTGCCCCAGTAATAAGTTCA---------------------CTACAG-GCCACTGGCTACATGCTTTGCTCTGGGTGCCCTCTGCTGAC-AGAACTCACAGAGCCATCTCACCTTTGCTCCTCCCTTTCCTCCTCCTACCCA---GGAGATTTAAGAGTCCACAGTAGATGACTCAGA-TTGCAAAAGGGTTTCCAGTTAAGAAATTTTCTTCAGCCCACA-GTGAGCAGCAGAG-----TTCTCCTGGCAGCTTTCTTAGG---CCCTTTCCATATGTATG-GCCCAGCCTTATCTTGTCTCCACATACATTAAC-------------------------TGACCAGCATGTGGTGGGATGGCTTTGTGAGTGCTAAGGCAAA-----------CTTCAAACGTG--------------ACACAGGAGAAAAACTGTTCTCCTAA--AGGGCCCAGTATAATGTGAAATGTTGCTAGT i mm10.chr15 C 0 I 2946 s canFam3.chr10 41008635 528 - 69331447 CTGACTTCAGCATGGG-ACAAAACATTTGAGAATATGGGCACAGACCAAACAAACTACAAGGGACACAC-AGTGAGTCCACTGCATGTTGCCTGGTACCTGCCT--------------GGGAAGCAGGGCAGAGCCTTCAGTGTCACAGAGCACTGATTTTGCTCTGGGTGCCCTCTGTTGACAAAAACAGACATAGCCACTT--GCC----ATCTCCCTTTTCTCCTCCCACCCCAAGAGAG--CCAAGAGTCCTTCGAGTGTGACTCAGACTTGA--CAAG-------GTTATGAAATTTTCCTAAGCCCCTACACAGTCAGGATAG-CCTTTTCTTCTTCCAA-TTTCCTTAGTCCCCCTCACTCTGTG-----TATCTGC---AGCTTCTCTCCAAACAGGTCAGCTATCTCAGGATAGCAGAACACCAAGTGAGCAGCGTTTACGATAATG--TACGTGGGACCTAAATCACAGCTGCTTTTCACTTCAGAAATGGCCACAGCATTAGCACAGTGGGAATAAACTGCTTTTGTAAATAGTCCCCAAAACAATCTGAAACCCAAACAAT i canFam3.chr10 I 349 I 8 a score=30817.000000 s hg38.chr22_KI270876v1_alt 243279 8 + 263666 ATTAAGAA s panTro4.chr22 34623490 8 + 49737984 ATTAAGAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31043296 8 + 46535552 ATTAAAAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100600276 8 - 115148730 ATTAAAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80741388 8 + 95678458 ATTAAAAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81167929 8 - 96509753 ATTAAAAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76424043 8 + 90941950 ATTAAAAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18693236 8 + 33263144 ATTAAAAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198396957 8 + 210400635 ATTAAAAA i calJac3.chr1 C 0 C 0 s canFam3.chr10 41009171 8 - 69331447 ATTAAAAA i canFam3.chr10 I 8 I 469 e mm10.chr15 77220614 2946 + 104043685 I a score=31982.000000 s hg38.chr22_KI270876v1_alt 243287 11 + 263666 TACTGATAAgg s panTro4.chr22 34623498 11 + 49737984 TACTGATAAgg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31043304 11 + 46535552 TACTGATAAgg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100600284 11 - 115148730 TACTGATAAgg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80741396 11 + 95678458 TACTGATGAgg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81167937 11 - 96509753 TACTGACGAgg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76424051 11 + 90941950 TActgatgagg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18693244 11 + 33263144 TACTGATGAgg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198396965 11 + 210400635 CACTGATGAAG i calJac3.chr1 C 0 I 493 e mm10.chr15 77220614 2946 + 104043685 I e canFam3.chr10 41009179 469 - 69331447 I a score=727303.000000 s hg38.chr22_KI270876v1_alt 243298 251 + 263666 ccgggcatggtggctcatgcctgtaatcccagcactttgggaggccatcgcgggcagatcac--gaggtcaggagttcgaggccagcctgaccaacatagtgaaaccccatctctactaaaaatacaaaaattagccgggcatggtggctaatt-------ttccagctagtcagaaggctgaggcagaagaattgcttgaacctgggaggcagaggttgcagtcagccaagattgcgccactgcactccagactgggtg s panTro4.chr22 34623509 251 + 49737984 ccgggcatggtggctcatgcctgtaatcccagcactttgggaggccatcgtgggcagatcac--gaggtcaggagttcgaggccagcctgaccaacatggtgaaaccccatctctactaaaaatacaaaaatcagccgggcatggtggctaatt-------ttccagctagtcagaaggctgaggcagaagaattgcttgaacctgggaggcagaggttgcagtcagccaagattgcgccactgcactccagactgggtg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31043315 251 + 46535552 ccgggcatggtggctcatgcctgtaatcccagcactttgggaggccaacgcgggcagatcac--gaggtcaggagttcgaggccagcctgatcaacatggtgaaaccccatctctactaaaaatacaaaaattagccgggcatggtggctaatt-------ttccagctactcagaaggctgaggcagaagaattgcttgaacctgggaggcagagggtgcagtcagccaagattgcgccactgcactccagcctgggtg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100600295 251 - 115148730 ccgggcatggtggctcatgcctgtaatcccagcactttgggaggccaacgcgggtggatcat--gaggtcaggagttcgaggccagcctgaccaacatggtgaaaccccatctctaccaaaaatacaaaaattagccgggcatggtggctaatt-------ttccagctactcagaaggctgaggcagaagaattgcttgaacctgggaggcagaggttgcagtcagccaagattgcgccactgcactccagcctgggtg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80741407 251 + 95678458 ctgggcacagtggcttacatttgtaatcccagcactttgggaggccaacgtgggcagatcat--gaggtcaggagttcaagaacagcctgaccaacatggtgaaaccctgcctctattaaaaatacaaaaattagccgggcaaggtggctaatt-------ttccagctactcaggaggctgaggcaggagaatcgcttgaacctggaaggcagaggttgcagtcagccaagattgtgccactgcactccagtctgggcg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81167948 251 - 96509753 ctgggcacagtggcttacatttgtaatcccagcactttgggaggccaacgtgggcagatcat--gaggtcaggagttcaagaacagcctgaccaacatggtgaaaccctgcctctactaaaaatacaaaaattagccgggcaaggtggctaatt-------ttccagctactcaggaggctgaggcaggagaatcgcttgaacctggaaggcagaggttgcagtcagccaagattgtgccactgcactccagtctgggcg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76424062 251 + 90941950 ctgggcacagtggcttacatttgtaatcccagcactttgggaggccaacgtgggcagatcat--gaggtcaggagttcaagaacagcctgaccaacatggtgaaaccctgcctctactaaaaatacaaaaattagccgggcgaggtggctaatt-------ttccagctactcaggaggctgaggcaggagaatcgctggaacctggaaggcagaggttgcagtcagccaagattgcgccactgcactccagtctgggcg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18693255 251 + 33263144 ctgggcacagtggcttacatttgtaatcccagcactttgggaggccaacgtgggcagatcat--gaggtcaggagttcaagaacagcctgaccaacatggtgaaaccccgcctctactaaaaatacaaaaattagccgggcgaggtgggtaatt-------ttccagctactcaggaggctgaggcaggagaatcgcttgaacctggaaggcagaggttgcagtcagccaagattgcgccactgcactccagtctgggcg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198397469 259 + 210400635 ctgagtgtggtggctcacacctgtatttccagcactttgagaggccgaagctggcagatcactgaaggtcaggagttcaagaccagcttcgccaatatggtggaaccccatctctactaaaaatacaaaaatcagccaggcgtggtagcgcatgcctgtaataccagctactcaggagtcttaggcagaagaattgcttgaacccaggaggcag-ggttgcagggagccaaaattgcaccactgccctccagcctgggtg i calJac3.chr1 I 493 C 0 e mm10.chr15 77220614 2946 + 104043685 I e canFam3.chr10 41009179 469 - 69331447 I a score=2780266.000000 s hg38.chr22_KI270876v1_alt 243549 897 + 263666 acagagct--agactccattt-------caaaaaaaaa---aaaaaCT---------------AGAC-ATGTCTAAATCAGGA---------CTTTGGTCTATGG--------------gctacttgtttttgtagaacccacacacagactaccagctaag--atagcttttacatcttgt--aatgatt---gaaagaaaaaatcaaaagaaaaatgacatttcatgacatataaaaattatatgaaattaaaatttcggtacccacaaataaagttttactagaatagagccacaatcttttgtttac-tataatctaagcctgcttccctgctaccgtgccagagttcctgagtagctctaacagagaccatatggcccaga--------------tgctctcagatgctttacagaaa--gtttgccccctcctgTTTTAAACTATTGATAAATGTGACACCTGAACCTTCAGTCAGGTATGAAGTGCTGGGTTTGAAGT--CCTATGGCTCTGTCTTAGCAATGA-CTTCCCCCAACATTTAGTGTGAGTCCTGCACGT-GGTGAGGGGTCAGCCTACACTGCCTAACACACTCCCCTTGCATCCACAGAAGCTGAa--ggtactgtgatagatttctggcatgttttttggctaatacttatcagcaatcctataaaagcat-cccatcttacaaatgaggaagtaagcctaagggaagt-taagtatcagtc-caaactggaa-tttgaactcaggtctgtctgacaccagagttctttgatcattcctcactggttttcaaa-ctgtctTCCAGTCAGCAGAGCCTTATGGGGGAAA----------------GGGCTCCAGGCCtttcatatc-tttt--------ttttctt------------ttttctttttccttttatttCCCCAACTTCTTACACTTCCATATTG-ttttagagataggg---tcttttgtcgcccaggctggagtgcactggcacagtcagctcact s panTro4.chr22 34623760 904 + 49737984 acagagct--agactccatttaaaaaaaaaaaaaaaaa---aaaaaCT---------------AGAC-ATGTCTAAATCAGGA---------CTTTGGTCTATGG--------------gctacttgtttttgtagaacccacacacagactaccagctaag--atagcttttacatcttgt--aatgact---gaaagaaaaaatcaaaagaaaaacgacatttcatgacatataaaaattatatgaaattaaaatttcagtacccacaaataaagttttactagaatagagccacaatcttttgtttac-tataatctaagcctgcttccctgctaccgtgccagagttcctgagtagctctaacagagaccatatggcccaga--------------tgctctcagatgctttacagaaa--gtttgccccctcctgTTTTAAACTATTGATAAATGTGACACCTGAACCTTCAGTCAGGTATGAAGTGCTGGGTTTGAAGT--CCTATGGCTCTGTCTTAGCAATGA-CTTCCCCCAACATTTAGTGTGAGTCCTGCACGT-GGTGAGGGGTCAGCCTACACTGCCTAACACACTCCCCTTGCATCCACAGAAGCTGAa--ggtactgtgctagatttctggcatgttttttggctaatacttatcagcaatcctataaaagcat-cccatcttacaaatgaggaagtaagcctaagggaagt-taagtatcagtc-caaactggaa-tttgaactcaggtctgtctgacaccagagttctttgatcattcctcactggttttcaaa-ctgtctTCCAGTCAGCAGAGCCTTATGGGGGAAA----------------GGGCTCCAGGCCTTTCATATC-TTTT--------TTTTCTT------------TTTTCTTTTTCCTTTTATTTCCCCAACTTCTTACACTTCCATATTG-ttttagagataggg---tcttttgtcgcccaggctggagtgcactggcacagtcagctcact i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31043566 889 + 46535552 acagagct--agactccattt-----------caaaaa---aaaaaCT---------------AGAC-ATGTCTAAATCAGGA---------CTTTGGTCTATGG--------------gccacttgtttttgtagaacccacacacagactaccagctaag--atagcttttacatcttgt--aatgatt---gaaagaaaaaatcaaaacaaaaatgacatttcatgacatataaaaattatatgaaattaaaatttcggtacccacaaacgaagttttattagaatagagccacaatcttttgtttac-tataatctaaggctgcttccctgctaccgtgccagag--cctgagtagctctaacagagaccatatggcccaga--------------tgctctcagatgctttacagaaa--gtttg-ccCCTCCTGTTCTAAACTATTGATAAATGTGACACCTGAACCTTCAGTCAGGTATGAAGTGCGGGGTTTGAAGT--CCTATGGCTCTGTCTTAGCAATGA-CTTCCCACAACATTTAGTGTGAGTTCTGCACGG-GGTGTGTGGTCAGCCTACACTGCCTAACACACTCCCCTTGCATCCACAGAAGCTGAa--ggtactgtgctagatttctggcatgttttttggctgatacttatcagcaatcctataaaagtat-cccatcttacaaatgaggaagtaagcctaacagaagt-taagtatcagtc-caaactggaa-tttgaactcaggtctgtctgacaccagagttctttgatcattcctcactggttttcaaa-ctgtctTCCAGTCAGCAGAGCCTTATGGGGGAAA----------------GGGCTCCAGGcctttcatatc-tttt--------tttt-tc------------ttttctttttccttttatttccCCAACTTCTTACACTTCCATATTG-ttttagagataggg---tcttttgttgcccaggctggagtgcactggcacaatcagctcact i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100600546 906 - 115148730 acagagct--agtctccattt----------caaaaaa---aaaaaCT---------------AGAC-ATGTCTAAATCAGGA---------CTTTGGTCTATAG--------------gccacttgtttttgtagaacccacacacagactaccagctaag--atagcttttacatcttgt--aatgatt---gaaacaaaaaatcaaaagaaaaacgacgtttcatgacatataaaaattatatgaaattaaaatttcggtacccacaaataaagttttattagaatagagccacaatcttttgtttac-tataatctaagcctgcttccctgctaccatgccagagttcctgagtagctctaacagagaccatatggcccaga--------------tgccctcagatgctttacagaaa--gtttgccccctcctgTTCTAAACTATTGATAAATGTGACACCTGAACCTTCAGTCAGGTATGAAGTGCTGGGTTTGAAGT--CCTACAGCTCTGTCTTAGCAATGA-CTTCCCACAACATTTAGTGTGAGTCCTGCACGG-GATGAGTGGTCAGTCTACACTGCCTAACACACTCCCCTTGCATCCACAGAAGCTGAa--ggtactgtgctagatttctggcatgtttcttggctaacacttatcagaaatcctataaaagcat-cccatctcacaaatgaggaagtaagcctaatggaagt-taagtatcagtc-taaactggaa-tttgaactcaggtctgtctgaccccagagttctctgatcattcctcactggttttcaaa-ctgtctTCCAGTCAGCAGAGCCTTATGGGGGAAA----------------GGGCTCCAGGCCTTTCATATC-tttt--------ttttcttttttttttttccttttctttttccttttatttCCCCAACTTCCTACACTTCCATATTG-ttttagagataggg---tcttctgttgcccaggctggagtgcactggcacagtcagctcact i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80741658 909 + 95678458 acagagct--agactccattt------caaaaaaaaaa-caaaaaaCT---------------AGAC-ATGTCTAAATCAGGA---------CTTTGGTCTATGG--------------gccacttgtttttgtagaacccacacacacactaacagctaagaaatagcttttacatcttgt--aataatt---gaaag-aaaaatcaaaagaaaaatgatgtttcatgacatataaaaattacatgaaattaaaatttcagaatctgcaaataaagttttattagaatacagccacattc-tttgtttac-tataatctaaggctgcttccctgctactgtgccagagttcctgagtagctctaacagagaccatatggcccaga--------------tgctctcagatgctttacagaaa--gtttgccccctcctgTTCTAAACTATTGATAAATGTGACACCTGAACCTTCAGTCAGGTATGAAGTGCTGAGTTTGAAAT--CTTATGGCCCTGTCTTAGTAATGA-CTTCCCATAACATTTAGTGTGAGTCCTGCACAG-GGTGAGTGGTCAGCCTACACTGCCTACCACACTCCTCTTGCATCCACAGAAGCTGAa--ggtactgtgctagatttgtggcatgttttttggctaatacttaccagcaatcctacaaaagcat-cccatcttacaaatgaggaagtaagcctaacagaagt-taagtatcagtc-caaactggaa-tttgaactcaggtctgtctgacaccagagttctttgatcattcctcactggttttcaaa-ctgtctTCCAGTCAGCAGAGCCTTATGGGGAGAGGGAAACACAGAGGACCGGGCTCCAGGCCTTTCATCTC-T----------------TT------------TTTTTTTTTTCCTTTTATTTCCCCAACTTCTTACACTTCCATAttttttttagagacaggg---tcttttgttgcccaggctggagtacactggcacagtcagctcact i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81168199 910 - 96509753 acagagct--agactccattt------caaaaaaaaaaccaaaaaaCT---------------AGAC-ATGTCTAAATCAGGA---------CTTTGGTCTATGG--------------gccacttgtttttgtagaacccacacacacactaacagctaagaaacagcttttacatcttgt--aataatt---gaaag-aaaaatcaaaagaaaaatgatgtttcatgacatataaaaattacatgaaattaaaatttcagtatctgcaaataaagttttattagaatacagccacactc-tttgtttac-tataatctaaggctgcttccctgctactgtgccagagttcctgagtagctctaacagagaccatatggcccaga--------------tgctctcagatgctttacagaaa--gtttgccccctcctgTTCTAAACTATTGATAAATGTGACACCTGAACCTTCAGTCAGGTATGAAGTGCTGAGTTTGAAAT--CTTATGGCCCTGTCTTAGTAATGA-CTTCCCATAACATTTAGTGTGAGTCCTGCACAG-GGTGAGTGGTCAGCCTACACTGCCTACCACACTCCTCTTGCATCCACAGAAGCTGAa--ggtactgtgctagatttgtggcatgttttttggctaatacttaccagcaatcctacaaaagcat-cccatcttacaaatgaggaagtaagcctaacagaagt-taagtatcagtc-caaactggaa-tttgaactcaggtctgtctgacaccagagttctttgatcattcctcactggttttcaaa-ctgtctTCCAGTCAGCAGAGCCTTATGGGGAGAGGGAAACACAGAGGACCGGGCTCCAGGCCTTTCATCTC-T----------------TT------------TTTTTTTTTTCCTTTTATTTCCCCAACTTCTTACACTTCCATAttttttttagagacaggg---tcttttgttgcccaggctggagtacactggcacagtcagctcact i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76424313 906 + 90941950 acagagct--agactccattt------caaaaaaaaaa-c-aaaaact---------------agac-aTGTCTAAATCAGGA---------CTTTGGTCTATGG--------------GCCACTTGTTTTTGTAGAACCCCCACACACACTAACAGCTAAGAAATAGCTTTTACATCTTGT--AATgatt---gaaag-aaaaatcaaaagaaaaatgatgtttcatgac--ataaaaattacatgaaattaaaatttcagtatctacaaataaagttttattagaatacaGCCACACTCTTTTGTTTAC-TATAATCTAAGGCTGCTTCCCTGCTACTGTGCCAGAGTTCCTGAGTAGCTctaacagagaccatatggcccaga--------------TGCTCTCAGATGCTTTACAGAAA--GTTTGCCCCCTCCTGTTCTAAACTATTGATAAATGTGACACCTGAACCTTCAGTCAGGTATGAAGTGCTGAGTTTGAAAT--CTTATGGCCCTGTCTTAGTAATGA-CTTCCCATAACATTTAGTGTGAGTCCTGCACAG-GGTAAGTGGTCAGCCTACACTGCCTAACACACTCCTCTTGCATCCACAGAAGCTGAA--GGTACTGTGCTAGATTTGTAGCATGTTTTTTGGCTAATACTTACCAGCAATCCTACAAAAGCAT-CCcatcttacaaatgaggaagtAAGCCTAACAGAAGT-TAAGTATCAGTC-CAAactggaa-tttgaactcaggtctgtctgacaCCAGAGTTCTTTGATCATTCCTCACTGGTTTTCAAA-CTGTCTTCCAGTCAGCAGAGCCTTATGGGGAGAGGGAAACACAGAGGACCGGGCTCCAGGcctttcatatc------------------tt------------ttttttttttccttttatttccccaACTTCTTACACTTccatattatttttagagacaggg---tcttttgttgcccaggctggagtacactggcacagtcagctcact i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18693506 909 + 33263144 atagagct--agactccattt------caaaaaaaaaa---aaaaaCT---------------AGAC-ATGTCTAAATCAGGA---------CTTCGGTCTATGG--------------gccacttgtttttgtagaacccccacacacactaacagctaagaaatagcttttacatcttgt--aatgatt---gaaag-aaaaatcaaaagaaaaatgatgtttcgtgacatataaaaattacatgaaattaaaatttcagtacctacaaataaagttttattagaatacagccacactcttttgtttac-tataatctaaggctgcttccctgctactgtgccagagttcctgagtagctctaacagagaccatatggcccaga--------------tgctctcagatgctttacagaaa--gtttgccccctcctgTTCTAAACTATTGATAAATGTGACACCTGAACCTTCAGTCAGGTATGAAGTGCTGAGTTTGAAAT--CTTATGGCCCTGTCTTAGTAATGA-CTTCCCACAACATTTAGTGTGAGTCCTGTACAG-GGTGAGTGGTCAGCCTACACTGCCTAACACACTCCTCTTGCCTCCACAGAAGCTGAa--ggtactgtgctagatttgtggcacgttttttagctaaaacttaccagcaatcctacaaaagcat-cccatcttacaaatgaggaagtaagcctaacagaagt-taagtatcagtc-caaactggaa-tttgaactcaggtctgtctgacaccagagttctttgatcattcctcactggttttcaaa-ctgtctTCCAGTCAGCAGAGCCTTATGGGGAGAGGGAAACACAGAGGACCGGGTTCCAGGACTTTCATATCtt----------------tt------------ttttttttttccttttatttCCCCAACTTCTTACACTTCCATAttttttttagagacacgg---tcttttgttgcccaggctggagtacactggcacagtcagctcact i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198397728 897 + 210400635 actgagag--agactccattt-------cgaaagaaaa---aaaaaCT----------------GAC-ATGTCTAAATCAGGa---------ctatggtccgtgg--------------gccacttgtttttgtagaacccacacacagactaccagctaag--ataacctttacatcttgt--actgact---gaaag-aaaaatcaaaagaaaaatgaaatttcatgacatataaaaattatatgacattaaaatgttgttacc-acaaacagagttttattagaatacagccacactcatttgtttac-tatcatctaaggctgcttccctgccatggtggcagggttcctgagtagctctaacagagaccatatggcccaga--------------cactctcagatgctttacagaaa--gtttgcccattcctgCTCTAAACTACTGATAAATGTGACACCTGAAGCTTCAATCAGGTATGAAGTGCTGGGTTTGAGGT--CCTATGCCCTTGTCTCAGCAGTGAGCTCCCCACAACATTTAGTGTGAGTTCTGCACAG-GGTGAGTGGCCAGCCCACACCCCCTAACACACTCCTCTTGTCTCCACAGAAGCTGAa--ggtactgtgctagatttctggcatgttt-ttgactaatacttatcaacaattctataaaagcat-cccatcttacaaatgagaaaccaaacctaagag------aagtattagtc-caaactggaa-tttgaactcaggtctgtctgatcccaggattctttgatcattccTTAGTGGTTTTCAAA-CTGTCTTCCAGTCAGCAGAGCCTTATCCAAAAAGGGAAACACAAAGGGCAGGGCTCTAGGCCTTTCATATC-T----------------TT------------TTCTTTT----CTTTTTTTCCTCCAACTTCTGATACTTCCGTAttttttttagagacagggtcttcttttgttgcccaggctggagtacactggcgtcatcagctcact i calJac3.chr1 C 0 C 0 s canFam3.chr10 41009648 957 - 69331447 ATAGGGTTAAAAACTGCATTG-----ACAAAAAAAAAA---AAAAACTTCATTGACTATCAATAGGCAATGTCTAAATAaggagtcagcaatctatggtccacggaccaaatccagcatgtcacttgtttttgtacaacctgcatatggaccatgagttaaa--atggttttcacatttttttaaatgattggggaaaa-aaaaatcaaaagc------gtatttcacgacaggtggatattacctaaaat-------tcagtgcccacagataaagttttattagaacacagccacatccatttatttacacgctatctatggctgc-tcacaactactacagcagag---ctgagtggctgccacaggggctattggacccaaagagcccgaagtatttgctctctgatcatttgcataaaatgtctgtccattcttgTTCTCAACGATTGATAAATGTGACGTGTGGATGTTCAGTCAAGTGCAAAGCACCCTACTGTAGGTTCCTGGGGACCCGGCCTTAGCAGCAAGCTCCCCACGCTCTTTAGCAGGAGCCCCGCACAGCTGAATGTGGCCGCTCTCTATCTCCTGGTGGGTGGATCTGTCCTCCAGAGAAGCCAGAGGggcactgcgctagg-ctccggcatgtgtgtaggttattacttatcaacgatcttacaaaagcatacccattttacaaatgaggacccaagcctgagagaggcggaaacatcaggcacaaactaaaactctgaacccacacctgcctgacacacagggcctttggttattccCCGGGGGTGCACAAACCTATGTCCAAATCGGTGATGCCTCAAGGTCAAAA-GAAGTCCAGAGGGTGGGGCTCCAGATCCTCTAAATC-TACTAGGACCACCTCATTT------------ACATTTTTCTGATATTGTGTCCATACTTCGttaaaaatatatatat-------atatatGG-----TTATAAAGTTCAGTCTGAAG------------GTCAGTGTACT i canFam3.chr10 I 469 I 29 e mm10.chr15 77220614 2946 + 104043685 I a score=514042.000000 s hg38.chr22_KI270876v1_alt 244446 176 + 263666 gaagcctcgaactcctaggttcaggccatcctcttgcctcagcctctagagtagctgagactacaggtgcacaccaccacatctggctaacttccaaatcttttctagGAGGACCATTCCATTTGCCTTTTTAATAAATTGTGGCCAAGGA-ATTGGTTTTTTTT------AAAAAGCCAATT s panTro4.chr22 34624664 176 + 49737984 gaagcctcgaactcctaggttcaggccatcctcttgcctcagcctctagagtagctgagactacaggtgcacaccaccacatctggctaacttccaaatcttttctagGAGGACCATTCCATTTGCCTTTTAAATAAATTGTGGCCAAGGA-ATTGGTTTTTTTT------AAAAAGCCAATT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31044455 176 + 46535552 gacgccttgaactcctaggttcaggccatcctcttgttttagcctctagagtagctgagactacaggtgcacaccaccacaactggctaacttccaaatcttttctagGAGGACCATTCCATTTGCCTTTTTAATAAATTGTGGCCAAGGA-ATTGTTTTTTTTA------AAAAAGCCAATT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100601452 176 - 115148730 gaagcctcgaactcctaggttcaggccatcctcttgcctcagcctctagagtagctgagactacaggtgcacaccaccacatctggctaaCTGCCAAATCTCTTCTAGGAGGACCATTCCATTTGCCTTTTTAATAAATTGTGGCCAAGGA-ATTGGTTTTTTTA------AAAAAGCCAATT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80742567 175 + 95678458 gaagcctcgaactcctaggctcaggccatcgtcttgcctcagcctctagagtagctgagactacaggtgcacaccaccacacctggctaacttccaaatcttttctagGAGGACCATTCCATTTGCCTTTTTAATAAATTGTGGCCAAGGATTTTTTTTTTTTTT--------AAAGCCAATT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81169109 174 - 96509753 gaagcctcgaactcctaggctcaggccatcgtcttgcctcagcctctagagtagctgagactacaggtgcacaccaccacacctggctaacttccaaatcttttctagGAGGACCATTCCATTTGCCTTTTTAATAAATTGTGGCCAAGGA-TTTTTTTTTTTTT--------AAAGCCAATT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76425219 176 + 90941950 gaagcctcgaactcctaggctcaggccaTCGTCTTGcgtcagcctctagagtagctgagactacaggtgcacaccaccacacctggctaacttccAAATCTTTTCTAGGAGGACCATTccatttgcctttttaataaattGTGGCCAagga------tttttttt-gaaaaaaaaagccaatt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18694415 176 + 33263144 gaagcctcgaactcctaggctcaggccatcgtcttgcctcagcatctagagtagctgagactacaggtgcacaccaccacacctggctaacttccaaatcttttctagGAGGACCATTCCATTTGCCTTTTTAATAAATTGTGGCCAAGGA-TTTTTTTTTTTTT------AAAAAGCCAATT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198398625 182 + 210400635 aaagcctcaaactcctgggctcaggccatcctcttgcctcagcctccagagtagctaagactacaggtgcatacaaccagacctggctaacttccaaatcttttctagGAGGACCATTACATTTGCCTTTTTAATAAATTGTGGCCATGGA-ATTGatttaaaaaaaaaaaaaaaaaacaatt i calJac3.chr1 C 0 C 0 e mm10.chr15 77220614 2946 + 104043685 I e canFam3.chr10 41010605 29 - 69331447 I a score=949248.000000 s hg38.chr22_KI270876v1_alt 244622 332 + 263666 TTAtgccacttattaccaccc-ttggcaaatctctcaggaaactgcaaatcttgatttcctcatctgccaatggagattaaaacccttc----ccccccaccca--aata-ataaaga-ctcactggggtcttaccaaagatcaaatgagaatgggtatgaaagcAATACCCATTACAGGTATTACAGCAATACCTGTAAACTATACAGGACTATAGATACATAACACATAACTATCACCCCTTAG---------TAAATAgggaagcaagtgggaagcaagtgggGAACATAATGTTTGCTGCTGAGCAAAGAAAAATTAAGCATGCAAGTAAA-ATGCAAAAAA-------AAAAA- s panTro4.chr22 34624840 320 + 49737984 TTAtgccacttattaccaccc-ttggcaaatctctcaggaaactgcaaatcttgatttcctcatctgccaatggagattaaaacccttc----cccccaaccca--aata-ataaaga-ctcactggggtcttaccaaagatcaaatgagaatgggtatgaaagcAATACCCATTACAGGTATTACAGCAATACCTGTAAACTATACAGGACTATAGATATATAACACATAACTATCACCCCTTAG---------TAAATA-----------GGGAAGCAAGTGGGGAACATAATGTTTGCTGCTGAGCAAAGAAAAATTAAGCATGCAAGTAAA-ATGC-AAAAA-------AAAAA- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31044631 319 + 46535552 TTATGCCACTTATTACCACCC-TTGGCAAATCTCTCAGGAAACTGGAAATCCTGATTTCCTTACCTGCTAATGGAGATTAAAACCCTTC----CCCCCCACCCA--AATA-ATAAAGA-CTCACTGGAGTCTCACCAAAGATCAAATGAGAATGGGTATGAAAGCAATATCCATTACAGGTATTACAGCAATACCTGTAAACTATACAGGACTATAGATATGTAACACATAACTATCACCCCTTAG---------TAAATA-----------GGGAAGCAAGTGGGGAAAATAATGTTTGCTGCTGAGCAAAGAAAAATTAAGCATGCAAGTAAA-ATGC--AAAA-------AAAAA- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100601628 322 - 115148730 TTAtgccacttattaccaccc-ttggcaaatctctcaggaaactggaaatcttgatttcctcatctgccaatggagattaaaacccttc---accccccaccca--aata-ataaaga-ctcactggggtctcaccaaagatcaaatgagaatgggtatgaaagcAATACCCATTACAGGTATTACAGCAATACTTGTAAACTATACAGGACTATAGATATATAACACATAACTATCGCCCCTTAG---------TAAATA-----------GGGAAGCAAGTGGGGAAAATAATGTTTGCTGCTGAGCAAAGAAAAATTAAGCATGCAAGTAAA-ATGCAAAAAA-------AATAA- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80742742 289 + 95678458 TTATGCCACTT-------acc-ttggcaaatctctcaggaaactggaaatcttcatttcctcatctgccaatggagattaaaacccttc----ccctccaccca--aata-ataaaga-ctcactggggtctcaccaaagatcaaatgagaatgggtatgaa------------------------agcaatacctgtaaaccacacaggactataGCTATATAACACATAACTATCACCCCTTAG---------TAAATA-----------GGGAAGCAAGTGGGGAAAATAATGTTTGCTACTGAGCAAAGAAAAATTAAGCATGCAAGTAAA-ATGC-AAAAA-------AATAA- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81169283 289 - 96509753 TTATGCCACTT-------ACC-TTGGCAAATCTCTCAGGAAACTGGAAATcttcatttcctcatctgccaatggagattaaaacccttc----ccctccaccca--aata-ataaaga-ctcactggggtctcaccaaagatcaaatgagaatgggtatgaa------------------------agcaatacctgtaaactacacaggactataGCTATATAACACATAACTATCACCCCTTAG---------TAAATA-----------GGGAAGCAAGTGGGGAAAATAATGTTTGCTACTGAGCAAAGAAAAATTAAGCATGCAAGTAAA-ATGC-AAAAA-------AATAA- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76425395 296 + 90941950 ttaTGCCACTTTTTACCACCC-TTGGCAAATCTCTCAGGAAACTGGAaatcttcatttcctcatctgccaaTGGAGATTAAAACCCTTC----CCCTCCACCCA--AATA-ATAAAGA-CTCACTGGGGTCTCACCAAAGATCAAATGAGAATGGGTATGAA------------------------AGCAATACCTGTAAACTACACAGGACTATAGCTATATAACACATAACTATCACCCCTTAG---------TAAACA-----------GGGAAGCAAGTGGGGAAAATAATGTTTGCTACTGAGCATAGAAAAATTAAGCATGcaagtaaa-atgc-aaaaa-------aataa- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18694591 296 + 33263144 TTAtgccactttttaccaccc-ttggcaaatctctcaggaaactggaaatcttcatttcctcatctgccaatggagattaaaaccgttc----ccctccaccca--aata-ataaaga-ctcactggggtctcaccaaagatcaaatgagaatgggtatgaa------------------------agcaatacctgtaaactacacaggactataGCTATATAACACATAACTATCACCCCTTAG---------TAAATA-----------GGGAAGCAAGTGGGGAAAATAATGTTTGCTACTGAGCAAAGAAAAATTAAGCATGCAAGTAAA-ATGC-AAAAA-------AATAA- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198398807 315 + 210400635 ttatgccacgtattaccaccctttgggaaatctcaca--aaactggaaatcttaatttcctcatctgccaatggagactaaaacctttc----ccccacaccca-----a-atgaaga-ctcactggggtttcacc-aagataaaacgagaatggatttgaaagcAACACCCATTACTGGTATTACAGCAATACCTGTAAACTATGTATGATTATAGATAT-------ATAACTATCACCCCTTAA---------TAAATA-----------GGGAAGCAAGTGGGGAAAATAATATTTGCTGCTGATCAAAGAAAAATTAAGCATGCAAGTAAA-ATGC-AGAAAAAGTAATAATAA- i calJac3.chr1 C 0 C 0 s canFam3.chr10 41010634 310 - 69331447 ctgcgttacctattaccacct-ttggcaaatctctcataaaacccgacatcttaatttcctcatctgccaaagattaataaaaccctacctgcccctccacccaccactgcatgtagacctcactggag-cccacc-aagatcaaatgaaaatggacaggaa------------------------aatgat--ctataaactctacgggactatagaaatataatacaggattatcaCCCCCTCAGCACAGGGCTGGGAA-----------AGGGAGCCAGAAAGGAA-ATAACATTGGCCACTGACTAAAGAAAAATCAAACATGCAAGTAAAGATGT-AAAAA-------ACCAAA i canFam3.chr10 I 29 C 0 e mm10.chr15 77220614 2946 + 104043685 I a score=205044.000000 s hg38.chr22_KI270876v1_alt 244954 66 + 263666 AATTCAAATAAAAGTAAATAA---------ATGC---------Ccagtgcaaatatc---aaccctggaatttaacacatttat-ttt s panTro4.chr22 34625160 66 + 49737984 AATTCAAGTAAAAGTAAATAA---------ATGC---------Ccagtgcaaatatc---aaccctggaatttaacacatttat-ttt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31044950 66 + 46535552 CATTCAAATAAAAGTAAATAA---------ATgc---------ccagtgcaaatatc---aaccctggaatttaacacatttat-ttt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100601950 66 - 115148730 CATTCAAATAAAAGTAAATAA---------ATGC---------Ccagtgcaaatatc---aaccctggaatttaacacatttat-ttt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80743031 65 + 95678458 CATTCAAATAAAAGTAAATAA---------GTGC---------Ccagtgcaaaaat----aaccttggaatctaacacatttat-ttt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81169572 65 - 96509753 CATTCAAATAAAAGTAAATAA---------GTGC---------Ccagtgcaaaaat----aaccttggaatctaacacatttat-ttt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76425691 65 + 90941950 cattcaaataaaagtaaataa---------gtgC---------CCAGTGCAAAAAT----AACCTTGGAAtctaacacatttat-ttt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18694887 65 + 33263144 CAGTCAAATAAAAGTAAATAA---------GTGC---------Ccagtgcaaaaat----aaccttggaatctaacacatttat-ttt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198399122 62 + 210400635 CATTCAAATA-----AAATAA---------GTGC---------CCAGTGCAACTATA---AAACttggaatctaacacatttacattt i calJac3.chr1 C 0 C 0 s mm10.chr15 77223560 79 + 104043685 AATCAAAATGAAAGTAATGAA---------ATACAAAATCTGACTAGTTGAAAATTCCTAAAGTTTGAAAGCTAGCACATTTAGATTT i mm10.chr15 I 2946 C 0 s canFam3.chr10 41010944 77 - 69331447 CATTTAATTAAAAGTTAATAAAGAAGACATGTGC---------TCAGTGGAAATAACAT-AAATATTCAATCTAACACATTTAC-ATT i canFam3.chr10 C 0 I 164 a score=541392.000000 s hg38.chr22_KI270876v1_alt 245020 159 + 263666 aaaacccagattcactcattaacaactacatagccttggacaatgactt-aatccctttgagccttggtttcctcacctgcaaatgggatttaaaaactact----------tGCTTTATACAGTGCCT-GCA-CATAGTCAGTATTC--CACC---TGTTA--GCCCTCTTTTC--------ATTA s panTro4.chr22 34625226 159 + 49737984 aaaacccagattcactcattaacaactacatagccttggacaatgactt-aatccctttgagccttggtttcctcacctgcaaatgggatttaaaaactact----------tgctttatacagtGCCT-GCA-CATAGTCAGTATTC--CACC---TGTTA--GCCCTCTTTTC--------ATTA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31045016 160 + 46535552 aaaacccagattcactcattaacaactacatagccttggacaatgactt-aatccctttgggccttggtttcctcagctgcaaatgggatttaaaaactact----------tgctttatacagtgcctagca-catagtcagtattc--cacc---tgttA--GCCCTCTTTTC--------ATTA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100602016 160 - 115148730 aaaacccagattcactcattaacaactacatagccttggacaatgactg-aatccctttgggccttggcttcctcacctgcaaatgcgatttaaaaactact----------tgctttacacagtGCCTAGCA-CATAGTCAGTATTC--CACC---TGTTA--GCCCTCTTTTC--------ATTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80743096 160 + 95678458 aaaactcagattcactcattaacaactacatagcctaggacaatgactt-aatccctttgagccttggtttcctccccttcaaatgggatttaaaaacgact----------tgctctATACAGTGCCGAGCA-CATAGTCAGTATTC--CACC---CGTGA--GCCCTCTTTTC--------ATCA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81169637 160 - 96509753 aaaactcagattcactcattaacaactacatagcctaggacaattactt-aatccctttgagccttggtttcctccccttcaaatgggatttaaaaacgact----------tgctctATACAGTGCCGAGCA-CATAGTCAGTATTC--CACC---CGTGA--GCCCTCTTTTC--------ATCA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76425756 159 + 90941950 aaaactcagattCACTCATTAACAACTACATAGCCTA-GACAATGACTT-AATCCctttgagccttggtttcctccccTTCAAATGGGATTTAAAAACGACT----------TGCACTATACAGTGCCGAGCA-CATAGTCAGTTTTC--CACC---GGTGA--GCCCTCTTTTC--------ATCA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18694952 160 + 33263144 aaaactcagattcactcattaacaactacatagccttggacaatgactt-aatccctttgagccttggtttcctccccttcaaatgggatttaaaaacgact----------tgctctATACAGTGCCGAGCA-CATAGTCAGTATTC--CACC---CGTGA--GCCCTCTTTTC--------ATCA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198399184 163 + 210400635 aaaacccagatacactcattaacaactacataaccttggacaatgactt-aatccctttgagccttgatttcctcacctgcaaatgggattttaaaaatatt----------tgctttatatagtGCCTAGCA-CATAGTCAGTATTC--CACCTGTTGTTA--GCCCTCTTTTC--------ATTA i calJac3.chr1 C 0 C 0 s mm10.chr15 77223639 148 + 104043685 AGAATTCAGATTCTCTAACTCAGAGACGCAGAACTCCAGAGCCTGATTT-AACCTCCCTGTGCCTT-ATTTCTTTACCT----ATATTACTTA--------T----------TGTCTCCTACAGGCCCTGGCACCATTGT--GCTCTC--CATG---TGTTAGTGCCTTCATTAC--------ACCA i mm10.chr15 C 0 I 66 s canFam3.chr10 41011185 181 - 69331447 Aaaacccaacttctctaattattggctacatagttttgggcaatgacttaaatctctttgagccttggtttcctcacctgcatatgggaggaataaaataatacttgctaaatgcttcatataggacttgaca-cataatcagtgctcaataca---tatta--gcAATCTTTTCCTGGGAAAATTA i canFam3.chr10 I 164 C 0 a score=166762.000000 s hg38.chr22_KI270876v1_alt 245179 69 + 263666 GGACACC------------------------------------CCCTGTCCCATGCCGAGACGTGTGTTACTCTGAAATTAAGATAATGTATGGGTTCCCTGTAC s panTro4.chr22 34625385 69 + 49737984 GGACACC------------------------------------CCCCGTCCCATGCCGAGACATGTGTTACTCTGAAATTAAGATAATGTATGGGGTCCCTGTAC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31045176 69 + 46535552 GGACACC------------------------------------CCCCATCCCATGCCGAGACATGTGTCACTCTGAAATTAAGATAATGTATGGGTTCCCTGTAC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100602176 105 - 115148730 GGACACCGGCCAACAccccccgccccccgcaccccaccccccgccccGTCCCATGCCGACACATGTGTTACTCTGAAATTAAGACAATGTGTGGGTTCCCTGTAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80743256 67 + 95678458 GGACACC------------------------------------CCT--TCCCATGCCGAGACACGTGTTACTCTGAAATTAAGATCATGTACGGGCTCCCTGCAC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81169797 67 - 96509753 GGACACC------------------------------------CCT--TCCCATGCCGAGACACGTGTTACTCTGAAATTAAGATCATGGACGGGCTCCCTGCAC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76425915 67 + 90941950 GGACACC------------------------------------CCT--TCCCATGCCAAGACACGTGTTACTCTGAAATTAAGATCATGTATGGGCTCCCTGCAC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18695112 67 + 33263144 GGACACC------------------------------------CCT--TCCCATGCCAAGACACGTGTTACTCTGAAATTAAGATCATGTATGGGCTCCCTGCAC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198399347 61 + 210400635 GGACACT------------------------------------CCC---CACATGCCAA-----GTGTTGCTTTCAAATTAAGATAATGTATGGATTCCCTGTAT i calJac3.chr1 C 0 C 0 s canFam3.chr10 41011366 39 - 69331447 AGATACA------------------------------------CCT-------------------------GCTAGAATTA-----ATGCACGGGCTCCCTACAC i canFam3.chr10 C 0 C 0 e mm10.chr15 77223787 66 + 104043685 I a score=1587360.000000 s hg38.chr22_KI270876v1_alt 245248 401 + 263666 CAATAATAGAATACCAGAATTAAAGAGCTAAAAGTATCTTTATCTTAAACGATCCTGTGATCCACACGACACCACAAAGCTTGTGAGAGCACAGGCTAAAGACACACTAAGGGAAC----AAAGATCCTAATGTAG---TAATAGGAGATACATGG-------------GAAAAGTTCTACTAATTCAATAAGTATATTTATTGAGTGTCTTAAGAGCCTTCTATGGCTCCATAAAATGACAGATTTACATTTAATATCCACTTGACCAAACCCATTAAACTTGTAAGAGGCACTCTCTTGCTGAACATCAGATATCTAGCTTCTTAAGTATTAATTTTTCA---------------TATCGCTCTGGCAAGGCAAAGGCAATAAAAACCTAGTGAAAGTCTGACCACAGTTTTGCTTTTTC-CCCCACTTTGTCCA s panTro4.chr22 34625454 401 + 49737984 CAATAATAAAATACCAGAATTAAAGAGCTAAAAGTATCTTTATCTTAAACGATCCTGTGATCCACACGACACCACAAAGCTTGTGAGAGCACAGGCTAAAGACACACTAAGGGAAC----AAAGATCCTAATGTAG---TAATAGGAGATACATGG-------------GAAAAGTTCTACTAATTCAATAAGTATATTTATTGAGTGTCTTAAGAGCCTTCTATGGCTCCATAAAATGACAGATTTACATTTAATATCCACTTGACCAAACCCATTAAACTTGTAAGAGGCACTCTCTTGCTGAACATCAGATATCTAGCTTCTTAAGTATTAATTTTTCA---------------TATCGCTCTGGCAAGGCAAAGGCAATAAAAACCTAGTGAAAGTCTGACCACAGTTTTGCTTTTTC-CCCCACTTTGTCCA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31045245 402 + 46535552 CAATAATAAAATACCAGAATTAAAGAGCTAAAAGTATCTTTATCTTAAACGATCCTGTGATCCATATGACACCACAAAGCCTGTGAGAGCACAGGCTAAAGACACACTAAGGGAAC----AAAGATCCTAATGCAG---TAATAGGAGATACATGG-------------GAAAAGTTCTACTAATTCAATAAGTATATTTATTGAGTGTCTTAAGAGCCTTCTATGGCTCCATAAAATGACAGATTTACATTTAGTATCCACTTGACCAAACCCATTAAACTTGTAAGAGGCACTCTCTTGCTGAACATCAGATATCTAGCTTCTTAAGTATTAATTTTTCA---------------TATCGCTCTGGCAAGGCAAAGGCAATAAAAACCTAGTGAAAGTCTGACCACAGTTTTGTTTTTTCTCCCCCCTTTGTCCA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100602281 401 - 115148730 CAATAATAAAATACCAGAATTAAAGAGCTAAAAGTATCTTTATCTTAAATGATCCTGTGATCCACATGACACCACAAAGCTTGTGAGAGCACAGGCTAAAGACACACTAAGGGAAC----ACAGATCCTAATGCAG---TAATAGAAGATACATGG-------------GAAAAGTTCTACTAATTCAATAAGTATATTTATTGAGTGTCTTAAGAGCCTTCTATGGCTCCATAAAATGACAGATTTACATTTAATATCCACTTCACCAAACCCATTAAACTTGTAAGAGGCACTCTCTTGCTGAACATCAGATATCTAGCTTCTTAAGTATTAATTTTTCA---------------TATCACTCTGGCAAGGCAAAGGCAATAAAAACCTAGTGAAAGTCTGACCACAGCTTTGTTTTTTT-CCCCCCTTTGTCCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80743323 400 + 95678458 CAATAATAAAATACCAGAATTAAAGAGCTAAAAGCATCTTTATCTTAAACGATCCTGTGATCCACATGACACCGCAAAGTTTGTGAGAGCATAGGCTAAAGACACACTAAGGGAAC----AAAGATCCTAATGCAG---TAATAGGAGATTCATGG-------------GAAAAGTTCTACTAATTCAATAAGTATATTTGTTGAGTGTCTTAAGAGCCTTCTATGGCTCCATAAAATGACAGATTTACATTTAATATCCACTTGACTGAACCCATTAAATGTGTAAGAGGCACTCTCTTGCTGAACATCAGATATCTGGTTTCTTAAGTATTAATTTTTCA---------------TATCGCTCTGGCCAGGCAAAGGCAATAACAACCTAGTGAACGTCCAACCACAGTTTTGTTTTTTT-CTCC-CTTTGTCCG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81169864 400 - 96509753 CAATAATAAAATACCAGAATTAAAGAGCTAAAAGCATCTTTATCTTAAATGATCCTGTGATCCACATGACACCGCAAAGTTTGTGAGAGCATAGGCTAAAGACACACTAAGGGAAC----AAAGATCCTAATGCAG---TAATAGGAGATTCATGG-------------GAAAAGTTCTACTAATTCAATAAGTATATTTGTTGAGTGTCTTAAGAGCCTTCTATGGCTCCATAAAATGACAGATTTACATTTAATATCCACTTGACTGAACCCATTAAATGTGTAAGAGGCACTCTCTTGCTGAACATCAGATATCTGGTTTCTTAAGTATTAATTTTTCA---------------TATCGCTCTGGCCAGGCAAAGGCAATAACAACCTAGTGAACGTCCAACCACAGTTTTGTTTTTTT-CTCC-CTTTGTCCG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76425982 415 + 90941950 CAATAATAAAATACCAGaattaaagagctaaaagcatCTTTATCTTAAACGATCCTGTGATCCACATGACACCGCAAAGTTTGTGAGAGCATAGGCTAAAGACACACTAAGGGAAC----AAAGATCCTAACGCAG---TAATAGGAGATTCATGG-------------GAAAAGTTCTACTAATTCAATAAGTATATTTGTTGAGTGTCTTAAGAGCCTTCTATGGCTCCATAAAATGACAGATTTACATTTAATATCCACTTGACTGAACCCATTAAATGCGTAAGAGGCACTCTCTTGCTGAACATCAGATATCTGGTTTCTTAAGTATTAATTTTTCATATCGCTCTGGCCAGTATCGCTCTGGCCAGGCAAAGGCAATAACAACCTAGTGAACGTCCaaccacagttttgttttttt-ctcc-ctttgtccA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18695179 400 + 33263144 CAATAACAAAATACCAGAATTAAAGAGCTAAAAGCATCTTTATCTTAAACGATCCTGTGATCCACATGACACCGCAAAGTTTGTGAGAGCATAGGCTAAAGACACACTAAGGGAAC----AAAGATCCTAATGCAG---TAATAGGAGATTCATGG-------------GAAAAGTTCTACTAATTCAATAAGTATATTTGTTGAGTGTCTTAAGAGCCTTCTATGGCTCCATAAAATGACAGATTTACATTTAATATCCACTTGACTGAACCCATTAAATGTGTAAGAGGCACTCTCTTGCTGAACATCAGATATCTGGTTTCTTAAGTATTAATTTTTCA---------------TATCGCTCTGGCCAGGCAAAGGCAATAACAACCTAGTGAACGTCCAACCACAGTTTTGTTTTTTT-CTCC-CCTTGTCTA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198399408 387 + 210400635 CAATAATATAATACCAGGATTAAAGAGCTAAAAGCATCTTTATCTTAGATCATCCTGTGAGCCACATGACACCACGAAGCTTGTGAGAACATAGGCTAAA-----------GGAAC----AAAGACTGTAATGCAG---TAATAGGAGCTACATGA-------------GAAAAGTTCTACTAATTCAGTAAGTGTATTTATTGAGTGTCTTAAGAGTCTTCTATGGCTCCACAAAATGACAGATTTACATTTAATATCCACTTGACCAAATCCATTAAACTTGTAAGAGGCA--CTCTTGCTGAACATCAGATATCTAGCTTCTTAAGTATGAATTTTTCA---------------TATCGCTCTGGCAAGGCAAAGGCAATAAAAACCTAGTGAAAGTCTGACCAAAGTTTTCTTTTTTC-CCCC-CTTTGTCCA i calJac3.chr1 C 0 C 0 s mm10.chr15 77223853 375 + 104043685 CAATCATAAAACAACAGAATTACAAAAT--------------CCTTAGGCAAT-CTATGACCCACATGATGCCAGGAAGCTTTCGAAAACACTGGCTGCGGGTACAATGA-GGAAC----AAGGG-------GCAGTCCTAATAGGAAACACAGAG-------------GGGACGATCTAGTAATCCAATAAAGTCATTTATTGGGTATTTTAAGAGCCTTCAAAGGCTAGATAAAATGACAGATTTACATTTAATACCCACTTGACCAAAGTCATTAAACTTGTAAGAGGTACTCTCTCACAGAAGATCAGATATCTTGCTTCTTGAGTATTAATTTTTCA---------------TAAAGTTCTGGCAAGGCAGAGGCGATGAAATC----TGGCAGTCCGACCAAAGC--TGTTCGGTT-CCCCTCTCTGTTCA i mm10.chr15 I 66 I 69 s canFam3.chr10 41011405 409 - 69331447 CAATAATGAAATAACAGAATTAAGGAGCTAGAAGCATCTTTAGATTAGATGATTCTATGATTCACAAGACACCATAAAGCTT-TGAGAGCACAGGCTGAAGGTGCTCTAA-GGAACAATGAAAGATCCTGA--------TAATAGGAGATACACAGGCAGTCTCTTGTTGAAAAGTTCTACTAATTCAATAAGGATGTTTATTGAGCGGTTTAAGAGCCTTCTATGGCTCCACAAAACGGCAGATTTACATTTAATATCCACTTGACCAAACCCATTAAATTTGTAAGAGGCACTCTCTTGCTGAAGATCAGATATCTGCCTTCTTAAGTATTAATTTTTTA---------------TATAGCTCTGGCAAGGCAAAAAGCAAAAAAACCTAGTGAAAGCCTG--CAAAGTTTTGTGTTTTT-TTTTTAATCTCCCA i canFam3.chr10 C 0 C 0 a score=754619.000000 s hg38.chr22_KI270876v1_alt 245649 235 + 263666 ------TAAGAGAAAATCCAAATGGAGTAGTCTCTGTATTTCAA-CAAGCTGAAGTTGAGTTTA---TTTAATTTATCCCGTTACCACACTTTACCAAATTCATATTGGGCACATACTTTGTGC-AAAGTATTCAAGAAAACTAAGAAGCATGAGAGAACTCTTGTTCTTACAGAATTCTGTGTGTTGGTCAAACCTTTTCACCATAATGCAATAGGCAGTGATAAAGTACTATTACAAAGTAGGA s panTro4.chr22 34625855 235 + 49737984 ------TAAGAGAAAATCCAAATGGAGTAGTCTCTGTATTTCAA-CAGGCTGAAGTTGAGTTTA---TTTAATTTATCCCGTTACCACACTTTACCAAATTCATATTGGGCACATACTTTGTGC-AAAGTATTCAAGAAAACTAAGAAGCATGAGAGAACTCTTGTTCTTACAGAATTCTGTGTGTTGGTCAAACCTTTTCACCATAATGCAATACGCAGTGATAAAGTACTATTACAAAGTAGGA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31045647 235 + 46535552 ------TAAGAGAAAATCGAAATGGAGTAGTTTCTGTATTTCAA-CAGGCTGAAGTTGAGTTTA---TTTAATTTATCCCGTTACCATACTTTACCAAATTCATATTGGGCACATACTTTGTGC-AAAGTATTCAAGAAAACTAAGAAGCATGAGAGAACTTTTGTTCTTACAGAATTCTGTGTGTTGGTCAAACCTTTTCACCATAATGCAATAGGCAGTGATAAAGAGCTATTACGAAGTAGAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100602682 235 - 115148730 ------TAAGAGAAAATCCAAATGGAGTAGTTGCTGTATTTCAA-CAGGCTGAAGTTGAGTTTA---TTTAATTTATCCCGTTACCACACTTTACCAAATTCATATTGGGCACACACTTTGTGC-AAAGTATTCAAGATAATTAAGAAGCATGAGAGAACTCTTGTTCTTACAGAATTCTGTGTGTTGGTCAAACCTTTTCACCATAATGCAATACGCAGTGATAAAGTGCTATTACAAAGTAGAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80743723 234 + 95678458 ------TAACAGAAAATCCAAATGGAGGAGTCTCTGTATTTCAA-CAGGCTGCAGTTGAGTTTA---TTTAATTTATCCCTTTACCACACTTTACCAAATTCATACTGGGCATGTACTTTGTGC-AAAGTATTCAAGAAAACTAAGAAGCATGAGAGAACTCTTGTTCTTACAGAATTCTGTGTGTT-GTCAAACCTTTTCACCATAATGCGATAGGCAGTGATAAAGTGCTATTACAAAGTAGAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81170264 234 - 96509753 ------TAACAGAAAATCCAAATGGAGGAGTCTCTGTATTTCAA-CAGGCTGCAGTTGAGTTTA---TTTAATTTATCCCTTTACCACACTTTACCAAATTCATACTGGGCATGTACTTTGTGC-AAAGTATTCAAGAAAACTAAGAAGCATGAGAGAACTCTTGTTCTTACAGAATTCTGTGTGTT-GTCAAACCTTTTCACCATAATGCGATAGGCAGTGATAAAGTGCTATTACAAAGTAGAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76426397 234 + 90941950 ------TAACAGAAAATCCAAATGGAGGAGTCTCTGTATTTCAA-CAGGCTGCAGTTGAGTTTA---TTTAATTTATCCCTTTACCACACTTTACCAAATTCATACTGGGCATGTACTTTGTGC-AAAGTATTCAAGAAAACTAAGAAGCATGAGAGAACTCTTGTTCTTACAGAATTCTGTGTGTT-GTCAAACCTTTTCACCATAATGCGATAGGCAGTGATAAAGTGCTATTACAAAGTAGAa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18695579 234 + 33263144 ------TAAGAGAAAATCCAAATGGAGCAGTCTCTGTATTTCAA-CAGGCTGCAGTTGAGTTTA---TTTAATTTATCCCTTTACCACACTTTACCAAATTCATACTGGGCATGTACTTTGTGC-AAAGTATTCAAGAAAACTAAGAAGCATGAGAGAACTCTTGTTCTTACAGAATTCTGTGTGTT-GTCAAACCTTTTCACCATAATGCGATAGGCAGTGATAAAGTGCTATTACAAAGTAGAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198399795 201 + 210400635 ------TAAGAGAAAATCCAAATGGAGTAGTCTGTGTATTTCAA-CAAGGCTGTTTTGAGTTTA---TTTAATTTATCCCTTTACCACACTTTCCCAGATTCATACGGGGCATATACTCTGTGC-AAAGTATTCCAGAAAACCAAGAAGCAAGAGAGAACT----------------------------------CTTTTCAACATAACACAATAGGCAGAGATAAAGTGCTATTACAAAGTAGAA i calJac3.chr1 C 0 C 0 s canFam3.chr10 41011814 222 - 69331447 CAGAAAAAAAAAAAAATCCCAACAGAGTAGCCTCTGTATTTCAAGAAGGCTAAAGGTAAGTTTACTTTTTAatttatcc----------ctttaccaaattattactgagcacttactctgggcaaaagtattcaagaatatcaagaagtatgatagggttcttgttctcacagaacagtatgggtc--------------accataaaataatacgtggtgataaaatgctgcaacaaagtggaa i canFam3.chr10 C 0 I 187 e mm10.chr15 77224228 69 + 104043685 I a score=1730322.000000 s hg38.chr22_KI270876v1_alt 245884 636 + 263666 GGCTGggctgggcatggtggctc-acgcctgtaatcccagcactctgggaagccgaggtgggcggatcacttgaggtcaggagttcaagaccaactcgaactggccaacatggtgaaaccccatctctactaaaataa--------------atat---atatatatat--------------------------------------aaaagttagccagacgtggtggcgcatacttgtaatctcagctactcgggaggctgagacaggagaatcacttgaactcaggaggcagaggttgcagtgagccgagatccagccgctacaatccagcctgggcaacagagcaagactttatctcaaaaaataaaaataaaaaataaaaaaaTTTAAAAAA-------AAAGTAGAAggccgggtgcagtggctcacacctgtaatcccaacacttt--gggagcctgaggcaagaggattgcttgagctcaggaattcaaaaccagcctgggcaacatagcaagacgctgtctttactaaaaataaaacatt-aaaaaattagctaggcgtggtagcacatgcatgcct--gtagttccagctacttgggaggctgaggtgggaggatcacttacttgagcccaggagttcgaggctccgccactgcactccagcctgagggacagagagagatcctgtctccaaaa s panTro4.chr22 34626090 656 + 49737984 GGCTGggctgggcatggtggctc-acgcctgtaatcccagcactctgggaagccgaggtgggcggatcacttgaggtcaggagttcaagaccaactcgaactggccaacatggtgaaaccccatctctactaaaataa--------------atat---atatatatataaatatatatataaataaataaatatatatatatataaaaaagttagccagacgtggtgacacatacttgtaatctcagctactcgggaggctgagacaggagaatcacttgaactcgggaggcagaggttgcagtgagccgagatccagccgctacaatccagcctgggcaacagagcaagactttatctcaaaaaa--------------aaaaaaa---aaaaaa-------aaaGTAGAAggccgggcgcagtggctcacgcctgtaatcccaacacttt--gggagcctgaggcaagaggattgcttgagctcaggaattcaaaaccagcctgggcaacatagcaagacgctgtctttactaaaaataaaacatt-aaaaaattagctaggcgtggtagcacatgcatgcct--gtagttccagctacttgggaggctgaggtgggagggtcacttacttgagcccaggagttcgaggctccgccactgcactccagcctgagggacagagagagatcctgtctcc-aaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31045882 624 + 46535552 GGCTGggccaggcatggtggctt-acgcctgtaatcccagcactctgggaggccgaggtggatggatcacttgaggtcaggagttcgagaccaactagaactggccaacatggtgaaaccccatctctactaaaataa--------------ataa---atatatatat--------------------------------------aaaagttagccggacgtggtggcgcatacttgtaatctcagctactcgggaggctgagacaggagaatcacttgaacttgggaggcagaggttgcagtgagccaagatccagccgctacaatccagcatgggcaacagaccaagactttatctcaaaaaactaaaa--------aaaaaaa---aaaaaa-------aaaGTAGAAggccgggcgcagtggctcacgcctgtaatcccaacacttt--gggagcctgaggcaagaggattgcttgagctcaggaattcaaaaccagcctgggcaacacagcaagacgctgtctttactaaaaataaaacatt-acaaaattagctaggcgtggtagcacatgcacgcct--gtagctccaggtacttgggaggctgaggtgagaggatcacttacttgagcccaggagttcgaggctgcagcactgcactccagcctgaggaacagagagagatcctgtctcc-aaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100602917 616 - 115148730 GGCTGggccgggcatggtggcta-acgcctgtaatcccggcactctgggaggccgaggtgggcggatcacttgaggtcaggagttcgagatcaactcgaactggccaacatggtgaaaccccatctctactaaaat----------------atat---atatatatat--------------------------------------aaaagttagccagacgtggtggtgcatacttgtaatctcagctactcgggaggctgagacaggagaatcacttgaactcgggaggcagaggttgcagtgagcaaagatccagctgctacaatccagcctgggcaagagagcaagactttatctcaaaaaa--------------cttaaaa---aaaaaa-------aaaGTAGAAggccaggtgcagtggctcacgcctgtaatcccaacactttgggggagcctgaggcaagaggattgcttgagctcaggaattcaaagccagcctgggcaacatagcaagatgc--tctttactaaaaataaaacatt-aaaaaattagctaggcatggtagcacattcacgcct--gtagttccagctacttgggaggctgaggtgggaggatcacttacttgagcccaggagttcgaggctgcgccactgcactccagcctgagggacagagagagatcctgtctcc-aaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80743957 637 + 95678458 GACTGggccgggcacagtggctc-acgcctgaaatcccggcactctgggaggccgaggtgggtggatcacttgaggtcaggagttcgagaccagctcgaactagccaacatggtgaaaccctatctctaccaaaaaaataaaataaaaaattatatgtaatatatacat--------------------------------------aaaagttagccag-cgcggtggtgcatacttgtaatctcagctactcgggtggctgagacaggagaatcacttgaactcgggaggcagaggttgcagtgagcca--ttccagctgctacactctagcttgggcatcagagcaagacttcatctcaaaaaact------------aaaaaaa---aaaaaa-------aaGGTAGAAggccgggcacagtggctcacgcctgtaatcccaacacttt--gggagactgaggcaagaggattacttgagctcaggaaatcaaaatcagcctgggcaacgtagcaaaatgctgtctttactgaaaataaaacattaaaaaaattagttcggcatggtagcacatgcacgcctgggtagttccagctacttgggaggctgaggtgggaggatcacttacttgagcccaggagttcgaggctgcaccactgcactccagcctgagggacagagagagattctgtctcc-aaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81170498 643 - 96509753 GACTGggccgggcacagtggctc-acgcctgaaatcccggcactctgggaggccgaggtgggtggatcacttgaggtcaggagttcgagaccaactcgaactagccaacatggtgaaaccctatctctaccaaaaaaataaaataaaaaattatatataatatatacat--------------------------------------aaaagttagccag-cgtggtggtgcatacttgtaatctcagctactcgggtggctgagacaggagaatcacttgaactcgggaggcagaggttgcagtgagcca--ttccagctgctacactctagcctgggcatcagagcaagacttcatctcaaaaaact------------aaaaaaa---aaaaaa-aaaaaCAAGGTAGAAggccgggcacagtggctcacgcctgtaatcccaacacttt--gggagactgaggcaagaggattacttgagctcaggaaatcaaaatcagcctgggcaacgtagcaaaatgctgtctttactgaaaataaaacattaaaaaaattagttcggcatggtagcacatgcacgcctgggtagttccagctacttgggaggctgaggtgggaggatcacttacttgagcccaggagttcgaggctgcaccactgcactccagcctgagggacagagagagattctgtctcc-aaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76426631 654 + 90941950 ggctgggccgggcacggtggctc-acgcctgaaatcccggcactctgggaggccgaggtgggtggatcacttgaggtcaggagttcgagaccaactcgaactagccaacatggtgaaaccccatctctaccaaaaaaataaaataaaaaattatatataatatatacat--------------------------------------aaaagttagccag-cgtggtggtgcatacttgtaatctcagctactcgggtggctgagacaggagaatcacttgaactcgggaggcagaggttgcagtgagcca--ttccagctgctacactccagcctgggcatcagagcaagacttcatctcaaaaaacttataaaaaaaa-aaaaaaa---aaaaaa-aaacacaaggtagaaggccgggcacagtggctcacgcctgtaatcctaacacttt--gggagactgaggcaagaggattacttgagctcaggaaatcaaaatcagcctgggcaacgtagcaaaatgctgtctttactaaaaataaaacatttaaaaaattagttcggcatggtagcacatgcacGCCtgggtagttccagctacttgggaggctgaggtgggaggatcacttacttgagcccaggagttcgaggctgcaccactgcactccagcctgagggacagagagagattctgtctcc-aaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18695813 655 + 33263144 GGCTGggccgggcatggtggctc-acgcctgaaatcccggcactctgggaggccgaggtgggtggatcacttgaggtcaggagttcgagaccaactcgaactagtcaacatggtgaaaccccatctctaccaaaaaaataaaataaaaaattatatataatatatacat--------------------------------------aaaagttagccag-cgtggtggtgcatacttgtaatctcagctactcaggtggctgagacaggagaatcacttgaactcaggaggcagaggttgcagtgagcca--atccagctgctacactccagcctgggcatcagagcaagacttcatctcaaaaaactaaaaaaaaaga-aaaaaac---aaaaaaCAAAAACAAGGTAGAAggccgggcacagtggctcacgcctgtaatcccaacacttt--gggagactgaggcaagaggattacttgagctcaggaaatcaaaatcagcctgggcaacgcagcaaaatgctgtctttactaaaaataaaacattaaaaaaattagttcggcgtggtagcacatgcacgcctgggtagttccagctacttgggaggctgaggtgggaggatcacttacttgagcccaggagttcgaggctgcaccactgcactccagcctgagggacagagagagattctgtctcc-aaa i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198399996 610 + 210400635 GGCCAAgccaggcacagtggctcaatgcctgtaaacccagcactttcggaggccaaggtgggcagattatttgaggtcaggactttgagaccaactcaaactggccaacatggtgaaacactgtctctactaaaaaaa---------------------------------------------------------------------taaaataagctgggcatagtggcccatacttgtaatctcagctactcaagaggctgaggcagaagaatcacttgaactcgggaggcagaagttgaagtgagccaagatccaggccctacactccagcctgggcaacagaacaagacttcatgttaaaaaaaagaaaa-------aggaaaa---agaaaa-------aaaGTAGAAggccaggcacagtgcctcatgcctgcaatcccagcacttt-cgttaggctgaggcaagaggattgcttgagctcaagatttcaaaaccagcctgggaaagttagcaagactccatctttactaaaaataaaacataaaaaaaattagtgaggtgtggtagcacatgcatgcct--atagttccagctacttgggaggctgaggagagaggatc----acttgagcccaggagttcgaggctgcgccactgcactccatcctggggaacacagagatatcctgtctcc-aga i calJac3.chr1 C 0 C 0 e mm10.chr15 77224228 69 + 104043685 I e canFam3.chr10 41012036 187 - 69331447 I a score=181887.000000 s hg38.chr22_KI270876v1_alt 246520 55 + 263666 aaaacacaaaaaGCAAAGTAGAAAGCATGTGCCCTGG---------GACACT--GAGTCAGCTCGC s panTro4.chr22 34626746 55 + 49737984 aaaacacaaaaaGCAAAGTAGAAAGCATCTGCCCTGG---------AACACT--GAGTCAGCTCGC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31046506 55 + 46535552 aaaacacaaaaaacaaaGTAGAAAGCATGTGCCCTGG---------GACACT--GAGTCAGCTCGC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100603533 55 - 115148730 aatacacaaaaaGCAAAGTAGAAAGCATGTGCCCTGG---------TACACT--GAGTCAGCTCGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80744594 55 + 95678458 aaaacacaaaaaGCAAAGTAGAAAGCATGTGCCCTGG---------GACACT--GAGTCAGCTCGC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81171141 55 - 96509753 aaaacacaaaaaGCAAAGTAGAAAGCATGTGCCCTGG---------GACACT--GAGTCAGCTCGC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76427285 55 + 90941950 aaaacacaaaaagcaaagtAGAAAGCATGTGCCCTGG---------GACACT--GAGTCAGCTCGC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18696468 55 + 33263144 aaaacacaaaaaGCAAAGTAGAAAGCATGTGCCCTGG---------GACACT--GAGTCAGCTCAC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198400606 55 + 210400635 aaaacacaaaaaGCAAAGTAGAAAGCATGTGCCCTGG---------GACATT--GAGTAAGCTCGA i calJac3.chr1 C 0 C 0 s mm10.chr15 77224297 64 + 104043685 AAAGTATGAACAG--AAGTGGAAAGCACATCCTTTGGAAGACAGCAGACACCAAGAATCTATTCCT i mm10.chr15 I 69 C 0 e canFam3.chr10 41012036 187 - 69331447 I a score=1320614.000000 s hg38.chr22_KI270876v1_alt 246575 359 + 263666 AAATAAATGCACT----AGCCAAAACCTCAAGGAGAAGGTAGCATTTGAAGTGAGATTTAAAGGACGACCTGTATTTAAACATGGGACATG--GGAAATAGTG-TAAGTAAAGGAATTAGAATTCAAACCCACATTTAATTCCAAAGCTACGCTACCCCACCCCACAGTGTGGC-TTGA--ACAGAGTACCTTACACAAAACAGAAGGAAAAAGACTGAGGCCATATCACAGAAGGCTTAGGATATCACACTAAAGAATATTCAGCAGAT----AAAAGCTAAGCAGAGTAATGAGACTCCAGTGAGATCAGAG--------CTGTTT--------AAATGCATGATTACATAGTACTTGCTGAGAGTATTTTCTGGTGGTACCAAAGT s panTro4.chr22 34626801 359 + 49737984 AAATAAATGCACT----AGCCAAAACCTCAAGGAGAAGGTAGCATTTGAAGTGAGATTTAAAGGACGAACTGTATTTAAACATGGGACATG--GGAAATAGTG-TAAGTAAAGGAATTAGAATTCAAACCCACATTTAATTCCAAAGCTATGCTACCCCACCCCACAGTGTGGC-TTGA--ACAGAGTACCTTACACAAAACAGAAGGAAAAAGACGGAGGCCATATCACAGAAGGCTTAGGATATCACACTAAAGAATATTCAGCAGAT----AAAAGCTAAGCAGAGTAATGAGACTCCAGTGAGATCAGAG--------CTGTTT--------AAATGCATGATTACATAGTACTTGCTGAGAGTATTTTCTGGTGGTACCAAAGT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31046561 359 + 46535552 AAATAAGTGCACT----AGCCAAAACCTCAAGGAGAAGGTAGCGTTTGATGTGAGATTTAAAGGATGAACTGTATTTAAACAGGGGACATG--GGAAATAGTG-TAAGTAAAGGAATTAGAATTCAAACCCACATTTAATTCCAAAGCTATGCTACCCCACCCCACAATGTGGC-TTGA--ACAGAGTACCTTACACAAAACAGAAGGAAAAAGACTGAGGCCATATCACAGAAGGCTTAGGATATTACACTAAAGAATATTCAGCAGAT----AAAAGCTAAGCAGAGTAATGAGACTCCAGTGAGATCAGAG--------CTGTTT--------AAACTCATGATTACATAGTACTTGCTGAGAGTATTTTCTGGTGGTACCAAAGT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100603588 359 - 115148730 AAATAAGTGCACT----AGCCAAAACCTCAAGGAGAAGGCAGCATTTGAAGTGAGATTTAAAGGACGAACTGTATTTAAACATAGGACATG--GGAAATAGTC-TAAGTAAAGGAATTAGAATTCACACCCACATTTAATTCCAAAGCTATGCTACCCCACCCCACAGTGTGGC-TTGA--ACAGGGTACCTTACACAAAACAGAAGGAAAAAGACTGAGGCCATATCACAGAAGGCTTAGGATATCACACTAAAGAATATTCAGCAGAT----AAAAGCTAAGCAGAGTAATGAGACTCCAGTGAGATCAGAG--------CTGTTT--------AAATGCATGATTACATGGTACTTGCTGAGAGTATTTTCTGGTGGTACCAAAGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80744649 360 + 95678458 AAATAAGTGCACT----AACCAAAACCTCAAGGAGAAGGTAGCATTTGAAGTGAGATTTAAAGGACGGACTGTATTTAAACATGAGAAATG--GGAAATAGTGTTAAGTAAAGGAATTAGAATTCAAACCCACATCTAATTTCAAAGCTATGCTACCCCACCCCACAGTGTGGC-TTGA--ACAGAGTACCTTACACAAAACAGAAGGAAAAAGACTGAAGCCAGATCACAGAAGGCTTAGCATATCACACTAAAGAATAATCAGCAGAT----AAAAGCTAAGCAGAGTAATGAGACTCCAGTGAGATCAGAG--------CTGTTT--------AAATGCATGATTACATAGTACTTGCTGAGAGTATTTTCTGGTGGTACCAAAGT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81171196 359 - 96509753 AAATAAGTGCACT----AACCAAAACCTCAAGGAGAAGGTAGCATTTGAAGTGAGATTTAAAGGACGGACTGTATTTAAACATGAGAAATG--GGAAATAGCG-TAAGTAAAGGAATTAGAATTCAAACCCACATCTAATTTCAAAGCTATGCTACCCCACCCCACAGTGTGGC-TTGA--ACAGAGTACCTTATACAAAACAGAAGGAAAAAGACTGAAGCCAGATCACAGAAGGCTTAGCATATCACACTAAAGAATAATCAGCAGAT----AAAAGCTAAGCAGAGTAATGAGACTCCAGTGAGATCAGAG--------CTGTTT--------AAATGCATGATTACATAGTACTTGCTGAGAGTATTTTCTGGTGGTACCAAAGT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76427340 359 + 90941950 AAATAAGTGCACT----AACCAAAACCTCAAGGAGAAGGTAGCATTTGAAGTGAGATTTAAAGGACGGACTGTATTTAAACATGGGACATG--GGAAATAGTG-TAAGTAAAGGAATTAGAATTCAAACCCACATCTAATTTCAAAGCTATGCTACCCCACCCCACAGTGTGGC-TTGA--ACAGAGTACCTTAcacaaaacagaaggaaaaagactGAAGCCAGATCACAGAAGGCTTAGCATATCACACTAAAGAATAATCAGCAGAT----AAAAGCTAAGCAGAGTAATGAGACTCCAGTGAGATCAGAG--------CTGTTT--------AAATGCATGATTACATAGTACTTGCTGAGAGTATTTTCTGGTGGTACCAAAGT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18696523 359 + 33263144 AAATAAGTGCACT----AACCAAAACCTCAAGGAGAAGGTAGCATTTGAAGTGAGATTTAAAGGACGGACTGTATTTAAACATGGGACATG--GGAAATAGTG-TAAGTAAAGGAATTAGAATTCAAACCCACATCTAATTTCAAAGCTACGCTACCCCAACCCTCAGTGTGGC-TTGA--ACAGAGTACCTTacacaaaacagaaggaaaaagactgaagccagatcacagaagGCTTAGCATATCACACTAAAGAATAATCAGCAGAT----AAAAGCTAAGCAGAGTAATGAGACTCCAGTGAGATCAGAG--------CTGTTT--------AAATGCATGATTACATAGTACTTGCTGAGAGTATTTTCTGGTGGTACCAAAGT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198400661 367 + 210400635 AAATAAGTACACT----AGCCaaaacttcaaggagaaggtaacatttgatgtgagacttaaaggatggactgtatttaaacatgggacatg--ggaaatattg-taagcaaaagaaTTCAAATTCAAACCCACATCTAATTCCAAAGCTACACTACCCGACCCCACAGTGTGGCTTTGA--ACAAAGCACCTGACACAAAACAGAAGGGAAACCACTGTGGCCAGATCACAGAAGGTTTAGGATATCACACTAAAGAATATTCAGCAGAT----AAAAGCTAAGCAGAGTAATAAGACTCCAGTGAGATCAGAGCTGTGCTTCTGTTT--------AAATACATGATTGCATAGTACTTCCTGAGAGTATTTTCTGG-GGTACCAAAGT i calJac3.chr1 C 0 C 0 s mm10.chr15 77224361 317 + 104043685 ACACAAACCTA-T----AGGCAAGACTTCATGGTGGAGGCAGCAACTACTGTGAGCCTT-CAGGATGGGCTGAATGCAAGCAT----------GGAGGTTCCC-GGAGGGAAGGCCCTGGAACTGAAACCCATTTCC---------------TTACCCGGCCCTGCAGTAAAGC-TGGAATACAGAGAACCTGACATGAGGGAGAGGAGAAGAGGTTGGGGC---GGCACGG-----------------------GAGTGCTCAGCAGAG----ACATGCTAAGCAGCATAGTGAGACTCCAGTGAGGCCAGAG--------CTGTGTGTCAGCACAAATGC-TAATTATAGAGAACTTGCTGCAATACAACTCTAGTGGCTCAAAAAT i mm10.chr15 C 0 I 508 s canFam3.chr10 41012223 362 - 69331447 aaataaatttattataaaaaaaagacttcatggaggagacagcatttgaagttggatttaaatgatgaacagtatttaaacatgtaaaaTACCATAAATATAG-AAATT--AGAAATTAGAATTAGAACCTGTATCTGATTTCAAAGCTACCTTACCCCATCCCATAGTGT---------------GTACCTTACATGAAAAAGAAGGAAAAAGACGGGGGCCAAATCATGGAAGGCCTAGAGTATC-CACTGAAGAGTTTTCAGCAGATTAAAAAAAGCTAAGCAGAATAATGATACCCCAGTGACATCAGAGCGGTGCCTTTGTTT--------AAATGTATGATTACATTAAACTTACTGAAATTATTTTCTAGTGGCACCAAATT i canFam3.chr10 I 187 C 0 a score=314755.000000 s hg38.chr22_KI270876v1_alt 246934 95 + 263666 TTCTAACACA-AGATCTTAAGTTACCTGTTGTATTCCC-CTGTCTCTCT-AATCAACCCTAGATGAGATCAGTATAATAGTATGCAGCTAATGCTATT s panTro4.chr22 34627160 95 + 49737984 TTCTAACACA-AGATCTTAAGTTACCTGTTGTATTCCC-CTGTCTCTCT-AATCAACCCTAGATGAGATCAGTATAATAGTATGCAGCTAATGCTATT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31046920 95 + 46535552 TTCTAACACA-AGATCTTAAGTTACCTGTTGTATTTCC-CTGTCTCTCT-AATCAACCCTAGAGGAGATCAGTATAATAGTATGCAGCTAATGCTATT i ponAbe2.chr22 C 0 I 143 s nomLeu3.chr7b 100603947 95 - 115148730 TTCTAACACA-AGATCTTAAGTTACCTGTTGTATTCCC-CTGTCTCTCT-AATCAACCCTAGATGAGATAAGTATAATAGTATGCAGCTAACGCTATT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80745009 92 + 95678458 TTCTAACAGA-AGATCTTAAGTTACCTGTT-TATTCCC---GTCTCTCT-AATCAACCCTAGATGAGATCAGTATAATAGTATGCAGCTAATGCTATT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81171555 92 - 96509753 TTCTAACAGA-AGATCTTAAGTTACCTGTT-TATTCCC---GTCTCTCT-AATCAACCCTAGATGAGATCAGTATAATAGTATGCAGCTAATGCTATT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76427699 92 + 90941950 TTCTAACAGA-AGATCTTAAGTTACCTGTT-TATTCCC---GTCTCTCT-AATCAACCCTAGATGAGATCAGTATAATAGTATGCAGCTAatgctatt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18696882 92 + 33263144 TTCTAACAGA-AGATCTTAAGTTACCTGTT-TATTCCC---GTCTCTCT-AATCAACCCTAGATGAGATCAGTATAATAGTATGCAGCTAATGCTATT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198401028 93 + 210400635 TTGTAACACA-AGATCTTAAGTTACCTATTGTATTCCT---GTCTCTCT-AATCAACCCTAGATGAGCTCAGTATAACTGTATGCAGCTAATGCTACT i calJac3.chr1 C 0 C 0 s canFam3.chr10 41012585 97 - 69331447 TTCTAACACAGAGACCTCAAATCATCTGTTGTATTCCCCCTGCCTTTCTAAATCAACCCTAAATCAGCTCAATATAATGGCATAT-GCTAATGTTATC i canFam3.chr10 C 0 C 0 e mm10.chr15 77224678 508 + 104043685 I a score=4329444.000000 s hg38.chr22_KI270876v1_alt 247029 1272 + 263666 AAGAAAATTAAAATATTTAATCTGTAACTGAAACCCGTAACTATATTGTCCACCAACTATGAGGCCTTTTG-TCTTACCTTATACTTAATTAGTTGGTTTCATTCTAAATCATCTGCCAGTGACTGTCTGTTGAAGAACAAAGCACTGAATAAATATGTCAAGCTTCTTAAATGTAACTCACAAAATGGTAGCCAGAATTGATTAT-AAAAGACCATCGATTGCTTGGTAGTACTAACCGCTACAGCAAGAATATCCCTACTAACTACTTAGCTGCCCTAACCAAGTCTAGTCAGATGAATTTCTCGATTTTGAAAATTGC---TAAT---GGAAATTCTATAATTTTCCTTTGTAAATGGCCCT-----------ATCTTT--AGTCAGATAATTCTTTTTGATGGTCACATTAAACCTCTCATTACAATACAAATCAATTGCCTATATACAAA----ATAACAGGTCAATCTATTGAAAAGTCAATCAGTGAAATTATGATCCATCCATTAACAAAATATTTAAGCAACTGGGTCATGAGTGGACTAACAATCACAGCT-CAACAATCCCA----GCAACCCTAAACTAAGC--AAAAAGAGGCAAAGCTAGGGGGAAAAGTCAAACTGCGGCATAAAAGGCAAGATGTGACAAACCAGGTACAGAAGAGCGATGAGAATAAAAGCCAGCCATATTTTTAATACTTCTGGC----ATCATTCATCTATCCACAGATCCACAGTAGCCCTGAAGGATTTAGGAG-----------GTGAGAGAACGCTC---------------A---AAGTATGACACTCCCAGGACCCACAAAAACCAAACCCATTACCACCAAAGAGTCCTTAAAGCAAAAAGAAGAAACTTGGGCCCAGAGATGAGAAGATGAGAAGAGACTTTCT-GGGTTACCTGGAAAGCCAAAGGCAGAGTTTAGTGCAACCTATTTTCACAACATCAGGCAATAAGTCACTCTTGACCTAGGACATTTTTAAGACtttaatcctttcaaacatc--ctatggtatcctcacattcac-----agaaagctgagtcttgagagaagttaagtgatttcctcCTAGTCCTCGCAGTATTTCCCAAACTCTCTTGGATCCAAACTTTATGGAAATGTTCATACA---GACATGTTAAACGATTTGAAACAATCAGAGGCAATAAGGAAAAATTTCATAA--GGGAGATTAAGTTGTGAACAAGGATCTTAATGGATACTTAGGA-TTCTGCTGGTAA-AGGAGAAACATTTCAAACGAAAGGCATTAGGAAGAAATAAATGCCCAAGATAGATATTTGAAGGACAGTGAAGAGAC s panTro4.chr22 34627255 1274 + 49737984 AAGAAAATTAAAATATTTAATCTGTAACTGAAACCCGTAACTATATTGTCCACCAACTATGAGTCCTTTTG-TCTTACCTTATACTTAATTAGTTGGTTTCATTCTAAATCATCTGCCAGTGACTGTCTGTTGAAGAACAAAAGACTGAATAAATATGTCAAGCTTCTTAAATGTAACTCACAAAATGGTAGCCAGAATTGATTATAAAAAGACCATCGATTGCTTGGTAGTACTAACCGCTACAGCAAGAATATCCCTACTAACTACTTAGCTGCCCTAACCAAGTCTAGTCAGATGAATTTCTCGATTTTGAAAATTGC---TAAT---GGAAATTCTATAATTTTCCTTTGTAAATGGCCCT-----------ATCTTT--AGTCAGATAATTCTTTTTGATGGTCACATTAAACCTCTCATTACAATACAAATCAATTGCCTATATACAAA----ATAACAGGTCAATCTACTGAAAAGTCAATCAGTGAAATTATGATCCATCCATTAACAAAATATTTAAGCAACTGGGTCATGAGTGGACTAACAATCACAGCT-TAACAATCCCA----GCAACCCTAAACTAAGC--AAAAAGAGGCAAAGCTAGGGGAAAAAGTCAAACTGCGGCATAAAAGGCAGGATGTGACAAACCAGGTACAGAAGAGCGATGAGAATAAAAGCCAGCCATATTTTTAATACTTCTGGC----ATCATTCATCTATCCACAGATCCACAGTAGCCCTGAAGGATTTAGGAG-----------GTGAGAGAACGCTC---------------A---AAGTATGACACTCCCAGGACCCACAAAAACCAAACCCATTACCACCAAAGAGTCCTTAAAGCAAAAAGAAGAAACTTGGGCCCAGAGATGAGAAGATGAGAAGAGACTTTCTAAGGTTACCTGGAAAGCCAAAGGCAGAGTTTAGTGCAACCTATTTTCACAACATCAGGCAATAAGTCACTCTTAACCTAGGACATTTTTAAGACtttaatcctttcaaacatc--ctatgatatcctcacattcac-----agaaagctgagtcttgagagaagttaagtgatttcctcCTAGTCCTCGCAGTATTTCCCAAACTCTCTTGGATCCAAACTTTATGGAAATGTTCATACA---GACATGTTAAACGATTTGAAACAATCAGAGGCAATAAGGAAAAATTTCATAA--GGGAGATTAAGTTGTGAACAAGGATCTTAATGGATACTTAGGA-TTCTGCTGGTAA-AGGAGAAACATTTCAAACGAAAGGCATTAGGAAGAAATAAATGCCCAAGATAGATATTTGAAGGACAGTGAAGAGAC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31047158 1273 + 46535552 AAGAAAATTAAAATATTTAATCTTTAACTGAAACCAGTAACTATATTGTCCACCAACTATGAGGCCTTTTG-TCTTACCTTATACTTAATAAGTTGGTTTCATTCTAAATCATCTGCCAGTGACTGTCTGTTGAAGAACAAAGGACTGCATAAATATGTCAAGCTTCTTAAATGTAACTCACAAAATGGTAGCCAGAATTGATTATAAAAAGACCATCGATTGCTTGGTAGTACTAACCACTACAGCAAGAATATGCCTACTAACGGCTTAGCTGCCCTAACCAAGTctagtcagatgaatttctcgattttgaaaattgc---taat---ggaaattctataattttcctttgtaaatggccct-----------atcttt--agtcagataattctttttgatggttacattaaacctctcattacaatacaaatcaattgcctATATACAAA----ATAACAGGTCAATCTATTGAAAAGTCAACCAGTGAAATTATGATCCATCCATTAACAAAATATTTAAGCAACTGGGTCATGAGTGGACTAACAATCACAGCT-TAACAATCCCC----GCAACCCTAAACTAAGC--AAAAAGAGGCAAAGCTAGGGGAAAAAGTCAAACTGCGGCATAAAAGGCAGGACGTGACAAACCAGGTACAAAAGAGCGATGAGAATAAAAGCCAGCCATATTTTTAATACTTCTGGC----ATCATTCATCTATCCACAGATCCACAGTAGCCCTGAAGGATTTAGAGG-----------GTGAGAGAACACTC---------------A---AAGTATGACACTCCCAGGACCCACAAAAACCAAACCCATTACCACCAAAGAGTCCTTAAAGCAAAAAGAAGAAACTTGGGCCCAGAGATGAGAAGATGAGAAGAGACTTTCT-AGGTTACCTGGAAAGCCAAAGGCAGAGTTTAGTGCAACCTATTTTCACAACATCAGGCAATAAGTCACTCTTGACCTAGGACATTTTTAAGACtttaatcctttcaaacatc--ctatggtatcctcacattcac-----agaaaactgagtcttgagagaagttaagtgatttcctcctagtcctcgcagtaTTTCCCAAACTCTCTTGGATCCAAACTTTATGGAAATGTTCACACA---GACATGTTAAACGAATTCAAACAATCAGAGGCAATAAGGAAAGATTTCATAA--GGGAGATTAAGTTGTGAACAAGGATCTTAATGGATACTTAGGA-TTCTGCTGGTAA-AGGAGAAACATTTCAAACGAGAAGCATTAGAAAGAAATAAATGCCCAAGATAGATATTTGAAGGACAGTGAAGAGAC i ponAbe2.chr22 I 143 C 0 s nomLeu3.chr7b 100604042 1275 - 115148730 AAGAAAATGAAAATATTTAATCTGTAACTGAAACCCGTAACTATATTGTCCACCAACTATGAGGCCTTTTG-TCTTACCTTATACTTAATTAGTTGGTTTCATTCTAAATCATCTGCCAGTGACTGTCTGTTGAAGAACAAAGGACTGAATAAATATGTCAAGCTTCTTAAATGTAACTCACAAAATGGTAGCCAGAATTTATTATAAAAAGACCATTGATTGCTTGGTAGTACTAACCGCTACAGCAAGAATATGCCTACTAACTACTTAGCTGCCCTAACCAAGTCTAGACAGATGAATTTCTCGATTTTGAAAATTGC---TAAT---GGAAATTCTATAATTTTCCTTTGTAAATGGCCCT-----------ATCTTT--AGTCAGATAATTCTTTTTGATGGTCACATTAAACCTCTCATTACAATATAAATCAATTGCCTACATATAAA----ATAACAGGTCAATCTATTGAAAAGTCAACCAGTGAAATTATGATCCATCCATTAACAAAATATTTAAGCAACTGGGTCATGAGTGAACTAACAATCACAGCT-TAACAATCCCA----GCAACCCTAAACTAAGC--AGAAAGAGGCAAAGCTAGGGGAAAAAGTCAAACTGCGGCAAAAAAGGCAGGATGTGACAAACCAGGTACAGAAGAGCGATGAGAATAAAAGCCAGCCATATTTTTAATACTTCTGGC----ATCATTCATCTATCCACAGATCCACAGTAGCCCTGAAGGATTTAGGAG-----------GTGAGAGAACACTC---------------A---AAGTATGACACTCCCAGGACCCACAAAAACCAAACCCATTACCACCAAAGAGTCCTTAAAGCAAAAAGAAGAAACTTGGGCCCAGAGATGAGAAGATGAAAAGAGATTTTCT-AGGTTACCTGGAAAGCCAAAGGCAGAGTTTAGTGCAACCTATTTTCACAACATCAGGCAATAAGTCACTCTTGACCTAGGACATTTTTAAGACtttaatcctttcaaacatc--ctatggtatcctcacattcac---tgagaaaactaagtcttgagagaagttaagtgatttcctcCTACTCCTCGCAGTATTTCCCAAACTCTCTTGGATCCAAACTTAATGGAAATGTTCATACA---GACATGTTAAACGAATTCAAACAATCAGAGGCAATAAGGAAAGATTTCATAA--GGGAGATTAAGTTGTGAACAAGGATCTTAATGGATACTTAGGA-TTCTGCTGGTAA-AGGAGAAACATTTCAAACGAAAGGCACTAGGAAGAAATAAATGCCCAAGATAGATATTTGAAGGACAGTGAAGAGAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80745101 1272 + 95678458 AAGAAAATTAAACTATTTAATCTGTAACTGAAACCCATAACTATATTGTCCACCAACTACGAGGCCTTTTG-TCTTACCTTATACTTAATTAGTTGGTTTCACTCTATATCATCTGCCAGTGACTGTCTGTTAAAGAACAAAGGACTGAATAAATATGTCAAGCTTCTTAAATGTAACTCACAAAATGATAGCCAGAATTGATTATAAAAAGACCACCAATTGCTTGGTAGTACTAACCCCTACAGCAAGAATAGGCCTACTAACTACTTAGCTGCCCTAACCAAGTctagtcaaatgaatttctcgattttgaaaattgc---taat---ggaaattctgtaattttcctttgtaaatggccctagtgattaataatcttt--agtcagataattctttttgatggtcacattaaacctctcattacaatacaaatcaattgcctATATACAAA----GTAACAGGTCAATCTACTGAAAAGTCAACCAGTGAAATTATGATCCATTCATTAACAAAATATTTAAGCAACTGGGTCATGAGTGGATCAACAATCACAGCT-TAACAATCCCA----GCAACCCTAAACTAAGC--AAAAAGAGGCAAAGCTAGGGGAAAAAGTCAAATTGTGGCATAAAAGGCAGGATGTGACAAACCAGGTACAGAAGAGCGATGAGAATAAAAGCCAGCCATATTTCTAATACTTCTGGC----ATCATTCATCTATCCACAGATCCACAGTAGCCCTGAAGGATTCAGCAG-----------GTGAGAGAACATTC---------------A---AAGTATGACACTCCCAAGACCCACAAAAACCAAACCCATTACCACCAAAGAGTCCTTAAAGCAAAAAgaagaaacttgggcccagagatgag--------aagagactttct-agattacctggaaagtcaaaggcaaagGTTAGTGCAACCTATTTTCACAACATCAGGCAGTAAGTCACTCTTGACCTAGGACATTTTTAAGACtttaatcctttcaaacatc--ctatggtatcctcactttcac-----agaaaactgaatcttaagagaagttaagtgatttcctcagagtcCTTGCAGTATTTCCCAAACTCACTTGGATCCAAACTTTATGGAAATGTTCATACA---GACATGTTAAACGAATTCAAA----CAGAGGCAATAAGGAAAGATTTCATAA--GGGAGATTAAGTTGTTAACAAGGATCTTAAAGGATACTTAGGA-TTCTGCTGGTAA-AGGAGAAACATTACAAACAAAAGGCATTAGGAAGAAATAAATGCCCAAGATAGATATTTGAAGGACTGTGAAGAGAC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81171647 1272 - 96509753 AAGAAAATTAAACTATTTAATCTGTAACTGAAACCCATAACTATATTGTCCACCAACTACGAGGCCTTTTG-TCTTACCTTATACTTAATTAGTTGGTTTCACTCTAAATCATCTGCCAGTGACTGTCTGTTAAAGAACAAAGGACTGAATAAATATGTCAAGCTTCTTAAATGTAACTCACAAAATGATAGCCAGAATTGATTATAAAAAGACCACCAATTGCTTGGTAGTACTAACCCCTACAGCAAGAATATGCCTACTAACTACTTAGCTGCCCTAACCAAGTCTAGTCAGATGAATTTCTCGATTTTGAAAATTGC---TAAT---GGAAATTCTGTAATTTTCCTTTGTAAATGGCCCTAGTGATTAATAATCTTT--AGTCAGATAATTCTTTTTGATGGTCACATTAAACCTCTCATTACAATACAAATCAATTGCCTATATACAAA----GTAACAGGTCAATCTACTGAAAAGTCAACCAGTGAAATTATGATCCATTCATTAACAAAATATTTAAGCAACTGGGTCATGAGTGGATCAACAATCACAGCT-TAACAATCCCA----GCAACCCTAAACTAAGC--AAAAAGAGGCAAAGCTAGGGGAAAAAGTCAAATTGTGGCATAAAAGGCAGGATGTGACAAACCAGGTACAGAAGAGCGATGAGAATAAAAGCCAGCCATATTTCTAATACTTCTGGC----ATCATTCATCTATCCACAGATCCACAGTAGCCCTGAAGGATTCAGCAG-----------GTGAGAGAACACTC---------------A---AAGTATGACACTCCCAAGACCCACAAAAACCAAACCCATTACCACCAAAGAGTCCTTAAAGCAAAAAgaagaaacttgggcccagagatgag--------aagagactttct-agattacctggaaagtcaaaggcaaagGTTAGTGCAACCTATTTTCACAACATCAGGCAGTAAGTCACTCTTGACCTAGGACATTTTTAAGACtttaatcctttcaaacatc--ctatggtatcctcactttcac-----agaaaactgaatcttaagagaagttaagtgatttcctcagagtcCTTGCAGTATTTCCCAAACTCACTTGGATCCAAACTTTATGGAAATGTTCATACA---GACATGTTAAACGAATTCAAA----CAGAGGCAATAAGGAAAGATTTCATAA--GGGAGATTAAGTTGTTAACAAGGATCTTAAAGGATACTTAGGA-TTCTGCTGGTAA-AGGAGAAACATTACAAACGGAAGGCATTAGGAAGAAATAAATGCCCAAGATAGATATTTGAAGGACTGTGAAGAGAC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76427791 1258 + 90941950 aagaaaattaaactaTTTAATCTGTAACTGAAACCCATAACTATATTGTCCACCAACTACGAGGCCTTTTG-TCTTACCTTATACTTAATTAGTTGGTTTCACTCTAAATCATCTGCCAGTGACTGTCTGTTAAAGAACAAAGGACTGAATAAATATGTCAAGCTTCTTAAATGTAACTCACAAAATGATAGCCAGAATTGATTATAAAAAGACCACCGATTGCTTGGTAGTACTAACCCCTACAGCAAGAATATGCCTACTAACTACTTAGCTGCCCTAACCAAGTCTAGTCAGATGAATTTCTCgattttgaaaattgc---taat---ggaaattctgtaattttcctttgtaaatgGCCCTAGTGATTAATAATCTTT--AGTCAGATAATTATTTTTGATGGTCACATTAAACCTCTCATTACAATACAAATCAATTGCCTATATACAAA----GTAACAGGTCAATCTACTGAAAAGTCAACCagtgaa--------------attaacaaaatatttaagcaaCTGGGTCATGAGAGGATCAACAATCACAGCT-TAACAATCCCA----GCAACCCTAAACTAAGC--AAAAAGAGGCAAAGCTAggggaaaaagtcaaattgtGGCATAAAAGGCAGGATGTGACAAACCAGGTATAGAAGAGCGATGAGAATAAAAGCCAGCCATATTTCTAATACTTCTGGC----ATCATTCATCTATCCACAGATCCACAGTAGCCCTGAAGGATTCAGCAG-----------GTGAGAGAACACTC---------------A---AAGTATGACACTTCCAAGACCCACAAAAACCAAACCCATTACCACCAAAGAGTCcttaaagcaaaaagaagaaacttgGGCCCAGAGATGAG--------AAGAGACTTTCT-AGATTACCTGGAAAGTCAAAGGCAAAGGTTAGTGCAACCTATTTTCACAACATCAGGCAGTAAGTCACTCTTGACCTAGGACatttttaagactttaatccTTTCAAACATC--CTATGGTATCCTCACTTTCAC-----AGAAAACTGAATCTtaagagaagttaagtgatttcCTCAGAGTCCTTGCAGTATTTCCCAAACTCACTTGGATCCAAACTTTATGGAAATGTTCATACA---GACATGTTAAACGAACTCAAA----CAGAGGCAATAAAGAAAGATTTCATAA--GGGAGATTAAGTTGTTAACAAGGATCTTAAAGGATACTTAGGA-TTCTGCGGGTAA-AGGAGAAACATTTCAAACGAAAGGCATTAGGAAGAAATAAATGCCCAAGATAGATATTTGAAGGACTGTGAAGAGAC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18696974 1269 + 33263144 AAGAAAATTAAACTATTTAATCTGTAACTGAAACCCATAACTATATTGTCCACCAACTATGAGGCCTTTTG-TCTTACCTTATACTTCATTAGTTGGTTTCACTCTAAATCATCTGCCAGTGACTGTCTGTTAAAGAACAAAGGACTGAATAAATATGTCAAGCTTCTTAAATGTAACTCACAAAATGATAGCCAGAATTGATTATAAAAAGACCACCGATTGCTTGGTAGTACTAACCCCTACAGCAAGAATATGCCTACTAACTACTTAGCTGCCCTAACCAAGTctagtcagatgaatttctcgattttgaaaattgc---taat---ggaaattctgtaattttcctttgtaaatggccctagtgattaataatcttt--agtcaggtaattctttttgatggtcacattaaacctctcattacaatacaaatcaattgcctATATACAAA----GTAACAGGTCAATCTACTGAAAAGTCAACCAGTGAAATTATGATCCATTCATTAACAAAATATTTAAGCAACTGGGTCATGAGTGGATCAACAATCACAGCT-TAACAATCCCA----GCAACCCTAAACTAAGC--AAAAAGAGGCAAAGCTAGGGGAAAAAGTCAAATTGTGGCATAAAAGGCAGGATGTGACAAACCAGGTACAGAAGAGCGATGAGAATAAAAGCCAGCCATATTTCTAATACTTCCGGC----ATCATTCATCTATCCACAGATCCACAGTAGCCCTGAAGGATTTAGCAG-----------GTGAGAGAACACTC---------------A---AAGTATGACACTCCCAAGACCCACAAAAACCAAACCCATTACCACCAAAGAGTCCTTAAAGCAAAAAgaagaaacttgggcccagagatgag--------aagagactttct-agattacctggaaagtcaaaggcagagGTTAGTGCAACCTATTTTC---ACATCAGGCAGTAAGTCACTCTTGACCTAGGACATTTTTAAGACtttaatcctttcaaacatc--ctatggtatcctcactttcac-----agaaaactgaatcttaagagaagttaagtgatttcctcagagtcCTTGCAGTACTTCCCAAACTCACTTGGATCCAAACTTTATGGAAATGTTCATACA---GACATGTTAAACAAATTCAAA----CAGAGGCAATAAGGAAAGATTTCATAA--GGGAGATTAAGTTGTCAACAAGGATCTTAAAGGATACTTAGGA-TTCTGCTGGTAA-AGGAGAAACATTTCAAACGAAAGGCATTAGGAAGAAATAAATGCCCAAGATAGATATTTGAAGGACTGTGAAGAGAC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198401121 1292 + 210400635 AAGAAATTTAAAATATTTAATCTGTAACCCAAACCCCTAACTATATTGTCCACCAACTATGAGGCCTTTTG-TCTTACCTTACACTTAATTAGGTGGTTTCATTCTAAATCATCTCCCAGTGACTGACTGCTGAAGAACAAAGGACTGAAGAAATATGTCAAGCTTCTTAAATGTAACTCACAAAATGGTAGCCAGAATTGATTATAAAAAGACCACTGATTGCTTGGTAGTACTAACCACTACAGCAAGAATATGCCTACTAACTACTTAACTGCCCTAAGCAAGcctagtcagatgaatttctcaattttgaaaattgctaataat---ggaaattctataatttccctttgtaaatggccctactgattaataatcttt--agtcagataattctttttgatgggcacattaagcttctcattacaatacaaatcaattgcctAAATATAAA----ATAACAGGTCAATCCACTGAAAAGCCAACCAGTGAAATTATGATCCATCTATTAACAAAA----TAAGCAACTGGGTCATAAGTGGACCGACAATAACAGCT-TTACAATCCCA----GCAACCCTAAACTAAGCAAAAAAAAAGGCAAAGCGAAAGGGAAAAGTCAAACTGTGGCATAAACGGCAGGATGTAACAAACCAGGTACTGAAGAGGGATGAAAATAAAAGCGAGCCACATTTTTAGTACTTCTGGCCTAAGTCATTCATCTATCCACAGATCCACAGTAGCCCTAAAGAATTTAGGA------------GTGAGAGAACGCTC---------------AAAGAAGCATGACACTCCCAAGAACCACAAAAACAAAACCCATTATCAAGAAAGAGTCCTTAAAGCAAAAAGAAGAAACTTGGGCCCAGAGATGAGACGATGAGAAGAGACTTTCT-AAATTACCTGGAAAGCCAAAAGCAGAGGATAGCGCAACCTATTTTCGCAACATCAGGCAATAAGTCACTCTTGACCTAGGACATTTTTAAGACTTTAATCTTTTCAAACATC--CTATGGCatcctcactttcat-----agaaaactatgtctt-agagaagttaagtgatttcctcatagtcctcacagTATTTCCCAAACTCACTTGGATCCAAACCTTATGGAAATGTCCATATA---GACATGTTAAACAAATTCGAACAATCAGAGGCAATTAGGAAAGATTTCATAAGGGGGAGATTAAGTTGTGACCAGGGATCTCAAAGGATACTTAGGA-TTCTGCTAGTAA-AGGAGAAAAATTTCAAACAGAAAGCATCAGGAAGAAATAAATGCCCAAGACAGATATTTGAAGGACTGTGAAGAGAC i calJac3.chr1 C 0 C 0 s canFam3.chr10 41012682 1225 - 69331447 ACGAAAATATAAATATTTAATCTATAGCTGAAACACATAACTATGCTGGCCACAAACTGTGAGGCCTTTTGCTTTTATCTTATACTTAACTAGTTGGTGTCATTCTAAATCATCTGCCAGTGG----CTGTTGAAGAACAAAGGTTTGAAGAGACATATCATGTTTCTTAAAAGTAACTTACAAAATGAAAGCCAAGTTTGGTTGT-----GACTATCTGCTGCT---------------------------TAAGTCTACTATTTGGCCAG---------------------AGATGAATTACCCGATTTTGAAAACTGC---TAATAAAGAAAATCCTTTAATTTTCCTTTATAAATAGTCCCAGTGATTAATAATCTTTACAGTCAGATCATTC--TTTGAGGGCCATATTAAACTACTCACTACAAGACAAATCAAATGCCTCTATATAAAGTATATATAATGCCAATCTACTGGAAAGCCAACCAGTGAAGTTATGATCCGTCAATTAACAAAATAA-TAAGGATTTGGGTCAAGAG---ACCAATACAAACAGTTCTGACAGCCTAAAATCACAAGCC-AAACTGAGT--AAAAACTGGCAAAGCGGGGGGAAGAAATCAAACCATGGAATAAAAGTCAGGATGTGACAA---AGAAACCAAAGAGGGATGAGAA-GAAAGCCAGCCATGTTTTCTAGGCTTCTGGCTGGAGTCACTCATCTATCCACAAATCTAGAGCAGTCCTGCTAAATCCAGAGGTAGGAAGTTAAGTGATAAAAACTTCCATTGTTTCCATAAGG---AAGCATGATACTGCCAAGAATCAC-AAAATCAAACCCATTACAGCC-AAGACTCCTTAACAGAAAAATAAGAAACATGGATCCAGAAATAAG--------AAGAGACTTTCT-AGACTACAAGAAAAACAGATGGGAGAGG-CAGTG--------TTATAGCACATCAGCTAATAAGTCACTCCTGACCTAGGGAATTCTTTAAAATGTAATGCTTACAaaagtaagtagtgccctcctccctttcactgatgaaaacactgggcctt-aaagaagttaaat--tttgctcatggtcTTCACAAAAATTCCCAAACTCACTT-CATCTGACACTTAGGGAAATGCTCATGCACATGACATGTTAAATGAGTTCAATGAA-TAGAGACAGTAAGAAAAGGTCCCATAC--AGCAGGTTAAGTTATAGCCAAGGATCTTGAAGGATACTTAAGAGTTCTGCTGGGAACAGGAGAAAGAATTCAAGCAAAAGGCACTGGGAAGAAATAAATATCCAGGACAG------------------------ i canFam3.chr10 C 0 C 0 e mm10.chr15 77224678 508 + 104043685 I a score=151352.000000 s hg38.chr22_KI270876v1_alt 248301 71 + 263666 ATATATAAAGCAGAAGAAAggccgggcacagtggctcacgcctataatcccagccctttgggaggccaagt s panTro4.chr22 34628529 69 + 49737984 --ATATAAAGCAGAAGAAAggccgggcacagtggctcacacctgtaatcccagccctttgggaggccaagt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31048431 69 + 46535552 --ATATAAAGCAGAAGAAAggccaggcgcagtggctcacgcctgtaatcccagcactttgggaggccaagt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100605317 69 - 115148730 --ATATAAAGCAGAAGAAAggccgggcgcagtggctcacgcctgtaatgccagcactttgggaggccaagt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80746373 69 + 95678458 --ATATAAGGCAGAAGGCAggctgggtgcagtggctcatgcctgtaatcccaggactttgggaggccaagt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81172919 69 - 96509753 --ATATAAGGCAGAAGGCAggctgggtgcagtggctcatgcctgtaatcccaggactttgggaggccaagt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76429049 69 + 90941950 --ATATAAGGCAGaaggcaggctgggtgcagtggctcatgcctgtaatcccaggactttaggaggccaagt i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18698243 69 + 33263144 --ATATAAGGCAGAAGGCAggctgggtgcagtggctcatgcctgtaatcccaggactttgggaggccaagt i chlSab2.chr19 C 0 C 0 s canFam3.chr10 41013907 28 - 69331447 ------AGATCTGAAGG-------------------------------------ACTCTGAGGAACCATGT i canFam3.chr10 C 0 C 0 e mm10.chr15 77224678 508 + 104043685 I e calJac3.chr1 198402413 0 + 210400635 C a score=496236.000000 s hg38.chr22_KI270876v1_alt 248372 236 + 263666 caggtggatcacctgaggttgggagttcgagaccagcctgaccaaaatggagaaatcctgtctctactaaaaatacaaaattagctgggtgtggtggcacatgcctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacctgggaggtggaggttgcggtgagccaagatcgcaccattgcactccagccggggcaacaagagtgaaactccgtctcaaaaaa s panTro4.chr22 34628598 235 + 49737984 caggtggatcacctgaggttgggagtttgagaccagcctgaccaaaatggagaaatcctatctctactaaaaatacaaaattagctgggtgtggtggcacatgcctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacctgggagggggaggttgcggtgagccaagatcgcaccattgcactccagcctgggcaacaagagtgaaactccgtctc-aaaaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31048500 232 + 46535552 caggtggatcacttgaggttgggagtttgagaccagcctgaccaaaatggagaaatcctgtctctactaaaaacacaaaattagctgggtgtggtggcacatgcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggcggaggttgcagtgagccaagatcgcgccattgcactccagcctgggcaacaagagcgaaactccatctc----aa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100605386 236 - 115148730 caggtggatcagctgaggttgggagttcgagaccagcctgaccaaaatggagaaatcctgtctctactaaaaatacaaaattagctgggtgtggtggcacatgcctgtaagcccagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggaggagtttgaggtgagccaagaccgcgccattgcactccagcctgggcaacaagagcaaaattccgtctcaaaaaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80746442 161 + 95678458 ccggtggatcatctgaggttgggagttggagaccagcctgaccaaaatggagaaaccccatctctactaaaaatacaaaattagccgggtgtggtggcacatgcctgtaatcccagctactcgggaggctgaggcaggcgaatcgcttgaacccaggaggT--------------------------------------------------------------------------- i rheMac3.chr10 C 0 M 55 s macFas5.chr10 81172988 236 - 96509753 ccggtggatcatctgaggttgggagttggagaccagcctgaccaaaatggagaaaccccatctctactaaaaatacaaaattagccaggtgtggtggcacatgcctgtaatcccagctactcgggaggctgaggcaggcaaatcgcttgaacccaggaggtggaggttgcagtgagctgagattgcgccattgcactccagcctgggcaacaggagcaaaactccgtctcaaaaaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76429118 236 + 90941950 ccggtggatcatctgaggttgggagttggagaccagcctgaccaaaatggagaaaccccatctctactaaaaatagaaaattagccgggtgtggtggcacatgcctgtaatcccagctactcgggaggctgaggcaggcgaatcgcttgaacccaggaggtggaggttgcagtgagctgagattgcaccattgcactccagcctgggcaacaggagcaaaactctgtctcaaaaaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18698312 236 + 33263144 ccggtggatcatctgaggttgggagttggagaccagcctgaccaaaatggagaaaccccatctctactaaaaatacaaaattagccgggtgtggtggcacatgcctgtaatcccagctactcgggaggctgaggcaggcgaatcgcttgaacccaggaggtggaggttgcagtgagctgagattgcgccattgcactccagcctgggcaacaggagcaaaactccgtctcaaaaaa i chlSab2.chr19 C 0 I 65 e mm10.chr15 77224678 508 + 104043685 I e canFam3.chr10 41013935 0 - 69331447 C e calJac3.chr1 198402413 0 + 210400635 C a score=7491.000000 s hg38.chr22_KI270876v1_alt 248608 9 + 263666 -----------aaaaaaaaa s panTro4.chr22 34628833 9 + 49737984 -----------aaaaaaaaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31048732 9 + 46535552 -----------aaaaaaaaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100605622 9 - 115148730 -----------aaaaaaaaa i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81173224 12 - 96509753 a--------acaaaaaaaac i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76429354 20 + 90941950 aaaaaaaatataaaaaaaaa i papAnu2.chr10 C 0 C 0 e mm10.chr15 77224678 508 + 104043685 I e canFam3.chr10 41013935 0 - 69331447 C e calJac3.chr1 198402413 0 + 210400635 C e rheMac3.chr10 80746603 55 + 95678458 M e chlSab2.chr19 18698548 65 + 33263144 I a score=5130.000000 s hg38.chr22_KI270876v1_alt 248617 4 + 263666 aaaa s panTro4.chr22 34628842 4 + 49737984 aaaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31048741 4 + 46535552 aaaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100605631 4 - 115148730 aaaa i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81173236 4 - 96509753 aaaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76429374 4 + 90941950 aaaa i papAnu2.chr10 C 0 C 0 s calJac3.chr1 198402413 4 + 210400635 ATAC i calJac3.chr1 C 0 C 0 e mm10.chr15 77224678 508 + 104043685 I e canFam3.chr10 41013935 0 - 69331447 C e rheMac3.chr10 80746603 55 + 95678458 M e chlSab2.chr19 18698548 65 + 33263144 I a score=12253.000000 s hg38.chr22_KI270876v1_alt 248621 13 + 263666 aaaGCAGAAGAAA s panTro4.chr22 34628846 13 + 49737984 aaaGCAGAAGAAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31048745 13 + 46535552 aaagcagaagaaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100605635 13 - 115148730 aaGGCAGAAGAAT i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81173240 7 - 96509753 aaa------acaT i macFas5.chr10 C 0 I 9 s papAnu2.chr10 76429378 13 + 90941950 aaaatatatatat i papAnu2.chr10 C 0 I 9 s calJac3.chr1 198402417 13 + 210400635 AAAGCAGAAGAAA i calJac3.chr1 C 0 C 0 s canFam3.chr10 41013935 13 - 69331447 AGAGTAGAAGAAA i canFam3.chr10 C 0 C 0 e mm10.chr15 77224678 508 + 104043685 I e rheMac3.chr10 80746603 55 + 95678458 M e chlSab2.chr19 18698548 65 + 33263144 I a score=1915860.000000 s hg38.chr22_KI270876v1_alt 248634 600 + 263666 TATGTTACTAGGG-TAGTAATGAGAAACAGAGCTGG-AAAAATGGGAAGCAAATTGTAGCGAGCCTTGAATGTCTGGCTCAGTTTTTACAAAATTCTGCTCAAGTTATA-AAGTCCCAAAAATGACTCCCTC-TTATACGCATGCTGCCAAGACCC---AAGAGTCAGGTAAATAAACTT-ACACAGATTTCATTTCCTTCACAAAGACCTCTTTTTCTTGGAGATGTCCAACAGCTAGATTCCTGAGCTAGAAATTTCAAATCTACAG--ATAATTCATTTCaaatagtgaataagaatcaaaaggaaaatga------------------gaaaatagaCTTAAATC--------------------------------------------------AGAATGTGAGAACTA-----------------------------------------------------------ATCATTCCCTTG--TAAAGCT---------------------------TCCTTATGGCCTCTTTTCCATAAAATAAATGAGAAAAATGACTTACTAGCCCTATTTACAtgccaagaaatttacatatgttatctctaatactgtaacaacctttcataataggaattattcctatttcacagatgaagaaattgaggctcag---agaacaaaaacttgcctaaagtcatttagcctgcaacagcaggattgatatttaaacctaAAGCCAAGGAG-Ggt-gtgtgcatatg------------tgtgtg s panTro4.chr22 34628859 600 + 49737984 TATGTTACTAGGG-TAGTAATGAGAAACAGAGCTGG-AAAAATGGGAAGCAAATTGTAGCGAGCCTTGAATGTCTGGCTCAGTTTTTACAAAATTCTGCTCAAGTTATA-AAGTCCCAAAAATGACTCCCTC-TTATACGCATGCTGCCAAGACCC---TAGAGTCAGGTAAATAAACTT-ACACAGATTTCATTTCCTTCACAAAGACCTCTTTTTCTTGGAGATGTCCAACAGCTAGATTCCTGAGCTAGAAATTTCAAATCTACAG--ATAATTCATTTCAAATAGTGAATAAGAATCAAAAGGAAAATGA------------------GAAAATAGACTTAAATC--------------------------------------------------AGAATGTGAGAACTA-----------------------------------------------------------ATCATTCCCTTG--TAAAGCT---------------------------TCCTTATGGCCTCTTTTCCATAAAATAAATGAGAAAAATGACTTACTAGCCCTATTTACAtgccaagaaatttacatatgttatctctaatactgtaacaacctttcataataggaattattcctatttcacagatgaagaaatagaggctcag---agaacaaaaacttgcctaaagtcatttagcctgtaacagcaggattgatatttaaacctaAAGCCAAGGAG-AGT-GTGTGCATATG------------TGTGTG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31048758 605 + 46535552 TATGTTAATAGAG-TATTAATAAGAAACAGAGCTGG-AAAAATGGGAAGCAAATTGTAGCAAGCCTTGAATGTCTGGCTCAGTTTTTACAAAATTCTGCTCAAGTTATA-AAGTCCCCAAAATGACTCCCTC-TTATACGCACGCTGCCAAGACCC---ATGAGTCAGGTAAATAAACTT-ACACAGATTTCATCTCCTTCACAAAGACCTCTTTTTCTTGGAGATGTCCAACAGCTAGGTTCCTGAGCTAGAAATTTCAAATCTACAGTTATAATTCATTTCAAATAGTGAATAAGAATCAAAAGGAAAATGA------------------GAAAATAGACTTAAATC--------------------------------------------------AGAATGTGAGAACTA-----------------------------------------------------------ATCATTCCCTTG--TAAAGCT---------------------------TCCTTATAGCCTCTTTTCCATAAAATAAATGAGAAAAATGACTTACTAGCCCTATTTACAtgccaagaaatttacatatgttatctctaatactgtaacaacctttcgtaataggaattattcctatttcacagatgaagaaattgaggctcagagaagaacaaaaacttgcctaaaatcatttagcttgcaacagcaggattgatatttaaacctaAAGCCAAGGAG-GTT-GTGTGCATGTG------------TGTGTG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100605648 615 - 115148730 TATGTTAATAGGG-TAGTAATGAGAAACAGAGCTGGAAAAAATGGGAAGCAAATTGTAGCGAGCCTTGAATGTCTGGCTCAATTTTTACAAAATTCTGCTGAAGTTATA-GAGTCCCAAAAATGACTCCCTC-TTATACGCATGCTGCCAAGACCC---ATGAGTCAGGTAAATAAACTT-ACACAGATTTCATTTCCTTCACAAAGACCTCTTTTTCTTGGAGATGTCCAATAGCTAGATTCCTGAGCTAGAAATTTCAAATCTACAG--ATAATTCATTTCAAACAGTGAATAAGAATCAAAAGGAAAATGA------------------GAAAATAGAC-TAAATC--------------------------------------------------AGAATGTGAGAACTA-----------------------------------------------------------ATTATTCCCTTG--TAAAGCT---------------------------TCCTTATGGCCTCTTTTCCATAAAATAAATGAGAAAAATGACTTACTAGCCCTATTTACAAgccaagaaatttacatatgttatctctaatactgtaacaacctttcataataggaattattcctatttcacagatgaagaaattgaggctcagagaagaacaaaaacttgcctaaaatcatttagcctgcaacagcaggattgatatttaaaactaAAGCCAAGGAG-Ggt-gtgtgcatgtgtgtgtgtgtgtctgtgtg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80746658 586 + 95678458 ----TTAATAGGG-TAATAATGAGAAACAGAGCTGA-AAAAATGGGAAGCAAATTGTAGCAAGCCTTGAATGTCTGGCTCAGTTTTTACAAAATTCTGCTCAGGTTAT---AGTCCCCAAAATGACTCCCTCTTTATATGCATGCTGCCAAGACCC---ATGAGTCAGGTAAATAAACTT-ACACAGATTTCATTTCCTTCACAAAGACCTCTTTTTCTTGGAGATGTCCAACAGCTAGATTCCTGAGCTAGAAATTTCAAATCTACAGATATGATTCATTTCAAATAGTGAATAAGAATCAAAAGGAAAATGA------------------GAAAATAGACTTAAATC--------------------------------------------------AGAGTGTGAGAACTA-----------------------------------------------------------ATCATTCCCTTG--TAAAGCT---------------------------TCCTTACGGCCTCTTTTCCATAAAATAAATGAGAAAAATGACTTACtagcccta-ttacatgccaagaaatttacatatgttatctctgatactgtaacaacctttcataataggaattattcctattttacagatgaagaaattgaggctcagagaagAACAAAAACTTG------------TAGCCTGCAACAGCAGGATTGATATTT-AACCCAGAACCAAGGAG-Ggt-gtgtgtgtgtg------------tgtgtg i rheMac3.chr10 M 55 I 74 s macFas5.chr10 81173256 603 - 96509753 TATGTTAATAGGG-TAATAATGAGAAACAGAGCTGA-AAAAATGGGAAGCAAATTGTAGCAAGCCTTGAATGTCTGGCTCAGTTTTTACAAAATTCTGCTCAGGTTAT---AGTCCCCAAAATGACTCCCTCTTTATATGCATGCTGCCAAGACCC---ATGAGTCAGGTAAATAAACTT-ACACAGATTTCATTTCCTTCACAAAGACCTCTTTTTCTTGGAGATGTCCAACAGCTAGATTCCTGAGCTAGAAATTTCAAATCTACAGATATGATTCATTTCAAATAGTGAATAAGAATCAAAAGGAAAATGA------------------GAAAATAGACTTAAATC--------------------------------------------------AGAGTGTGAGAACTA-----------------------------------------------------------ATCATTCCCTTG--TAAAGCT---------------------------TCCTTACGGCCTCTTTTCCATAAAATAAATGAGAAAAATGACTTACTAGCCCTA-TTACAtgccaagaaatttacatatgttatctctgatactgtaacaacctttcataataggaattattcctattttacagatgaagaaattgaggctcagagaagaacaaaaacttgcctaaaatcatttagcctgcaacagcaggattgatatttaaacccagAACCAAGGAG-Ggt-gtgtgtgtgtg------------tgtgtg i macFas5.chr10 I 9 I 8 s papAnu2.chr10 76429400 603 + 90941950 tatgttaataggG-TAATAATGAGAAACAGAGCTGA-AAAAATGGGAAGCAAATTGTAGCAAGCCTTGAATGTCTGGCTCAGTTTTTACAAAATTCTGTTCAGGTTAT---AGTCCCCAAAATGACTCCCTCTTTATATGCACGCTGCCAAGACCC---ATGAGTCAGGTAAATAAACTT-ACACAGATTTCATTTCCTTCACAAAGACCTCTTTTTCTTGGAGATGTCCAACAGCTAGATTCCTGAGCTAGAAATTTCAAATCTACAGATATGATTCATTTCAAATAGTGAataagaatcaaaaggaaaatga------------------gaaaatagactTAAATC--------------------------------------------------AGAGTGTGAGAACTA-----------------------------------------------------------ATCATTCCCTTG--TAAAGCT---------------------------TCCTTACGGCCtcttttccataaaataaatgagaaaaatgacttACTAGCCCTA-TTACATGCCAAGAAATTTACATATGTTATCTCTGATACTGTAACAACCTTTCATAATAggaattattcctattttacagatgaagaaattgaggctcggAGAAGAACAAAAACTTGCCTAAAATCATTTAGCCTGCAACAGCAGGATTGATATTTAAACTCAGAACCaaggag-ggg-gtgtgtgtgtg------------tgtgtg i papAnu2.chr10 I 9 I 24 s chlSab2.chr19 18698613 604 + 33263144 tATGTTAATAGGG-TAATAATGAGAAACAGAGCTGG-AAAAATAGGAAGCAAATTGTAGCAAGCCTTGAATGTCTGGCTCAGTTTTTACAAAATTCTGCTCAGGTTAT---AGTCCCCAAAATGACTCCCTCTTTATATGCATGCTGCCAAGACTC---ATGAGTCAGGTAAATAAACTT-ACACAGATTTCATTTCCTTCACAAAGACCTCTTTTTCTTGGAGATGTCCAACAGCTAGATTCCTGAGCTAGAAATTTCAAATCTACAGATATGATTCATTTCaaatagtgaataagaatcaaaaggaaaatga------------------gaaaatagaCTTAAATC--------------------------------------------------AGAGTGTGAGAACTA-----------------------------------------------------------ATCATTCCCTTG--TAAAGCT---------------------------TCCTTACGGCCTCTTTTCCATAAAATAAATGAGAAAAATGACTTACTAGCCCTA-TTACAtgccaagaaatttacatatgttatctctgatactgtaacaacctttcataataggaactattcctattttacagatgaagaaattgaggcttggagaagaacaaaaacttgcctaaaatcatttagcctgcaacagcaggattgatatttaaacccagAACCAAGGAG-GGGCgtgtgtgtgtg------------tgtgtg i chlSab2.chr19 I 65 C 0 s calJac3.chr1 198402430 575 + 210400635 TATATGAATAGGG-TAATAATGAAAAACAGGGCTGG-AAAAATGGTAAGCAAATTGCAGTGAGCCTTGGATGTCTGGCT--GTTTTTACAAAATTCTAGTCAAGTTATAGAAGTCCCAAAAATGATTCCCTCTTTATATGCATGCTGCCAAGACCC---ATGAATCAGGTAAATAAACTTAACACAGATTTCATTTCCTTCACAAAGACCTCTTTTTCTTGGAGATGTCCCACAGCTAGATTCCTGAGCCAGAAATTTCAAATCTACAGATATAATTCATTTCAAAGAGTGAGTAAGAATCAAAAGGAAAATGA------------------GAAAATAGATTTAAATC-------------------------------------------------AAGAGTGTGAGAACTA-----------------------------------------------------------ATCACTCCCTTG--TAAAGCT---------------------------TCCTTAAAGCCTCTTCTCCATAA---AAATGAGAAAAATGATTTGCTAGCCCTA-TCACAtgccaagaaatttacatatgttatctctaatcctgtaacaacctttccaagtaagaattattcctatttta----------------------------AACAAAAACTTGCCTATAGTCATTCAGCCTGCAAAAGCAGGATTGATCTTTAAACCTAAAGCCAAGGAG-GGT-AAGGGTGTGTG------------TGTGGG i calJac3.chr1 C 0 C 0 s canFam3.chr10 41013948 731 - 69331447 TATGTGGAAGGGACTAACAATAAGCATGATAGTGAT-AAA--------------------GAACCTTGAATGTCCAGTATAG-TCTGACCAGATTCTGTTCAAGTCACAACAGTCTCAAAACCGACTCCCTCTTTCTATTGATGCTGCCAAGATCCAAAATGAGGTAGGTAAATAAACGT-ATATAGGTTTCATTCCCCACACACAAGCATATTATTCTTGGGAATATGGTGAAGCTATGTTCCCGAGCTAGAAATTTCAAATCTACAGACAGAATTCATTTCACATGGT------AAATCAAAAGAAAAATGACTTATGTCAGAGACTGTGGAAACTAAACTAAGGCCTCTTTTCCTTTTTTTTttttttttaaagattttatttatttattcatgagagaaagagagaggcagagacacaggcagagagagaagcaggctccacggagggactcgatcccacgtctccaggatcatgccctgggctgaaggtggcaccaaaccgctgagccacccgggctgcccATGGCCTCTTTTCCATAAAATTAATGAGAAAAATGCTTTAATGACCCTA-TCACACACCAGGAAATT----GATGttacctctaatccc---acaacttttcacagaagacaacattcctattttatggatgaagaaactgaggctcag--aaaaagaaatacttgcccaaagtcacacagcctgcaatggcagtactgatatttaaacccaaacCCAGGGCGTGGT-TTGTCCATGTG------------CGTGCA i canFam3.chr10 C 0 C 0 e mm10.chr15 77224678 508 + 104043685 I a score=14213.000000 s hg38.chr22_KI270876v1_alt 249234 35 + 263666 tgtctgtgtctgttgg-------------gggggcagggg----tgtctgtc s panTro4.chr22 34629459 35 + 49737984 TGTCTGTGTCTGTTGG-------------GGGGGCAGGGG----TGTCTGTC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31049363 36 + 46535552 TGTCTGTGTCTGTTGG------------AGGGGGCAGGGG----TGTGTGTC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100606263 36 - 115148730 tgtctgtgtctgttgt------------ggggtgcagggg----tgtctgtc i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81173867 40 - 96509753 tgtgtgtgtCTGTCTGTCTGTCTGTTTGGGGGGGCAGGGG------------ i macFas5.chr10 I 8 C 0 s papAnu2.chr10 76430027 29 + 90941950 tgtgtgtgtctgtttg-----------gggggggCAGGGG------------ i papAnu2.chr10 I 24 C 0 s chlSab2.chr19 18699217 33 + 33263144 tgtgtgtgtCTGTTTg-----------ggggggggggggggggg-------- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198403005 21 + 210400635 ---------------------------GGGGGGTTTGGGG----GAGATGTC i calJac3.chr1 C 0 C 0 s canFam3.chr10 41014679 12 - 69331447 TGTGCGTATCCC---------------------------------------- i canFam3.chr10 C 0 C 0 e mm10.chr15 77224678 508 + 104043685 I e rheMac3.chr10 80747244 74 + 95678458 I a score=131784.000000 s hg38.chr22_KI270876v1_alt 249269 40 + 263666 tgtctgtctgCAGAGAAATTGCCACAAAACAGCTTTATAT s panTro4.chr22 34629494 40 + 49737984 TGTCTGTCTACAGAGAAATTGCCACAAAACAGCTTTATAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31049399 40 + 46535552 TCTCTGTCTACAGAGAAATTGCCACAAAACAGCTTTATAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100606299 40 - 115148730 tgtctgtCTACAGAGAAATTGCCACAAAACAGCTTTATAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80747318 40 + 95678458 TGTCTGTCTACGGAGAAATTGCCATGAAACAGCTTTATAT i rheMac3.chr10 I 74 I 314 s macFas5.chr10 81173907 40 - 96509753 TGTCTGTCTACGGAGAAATTGCCACAAAACAGCTTTATAT i macFas5.chr10 C 0 I 317 s papAnu2.chr10 76430056 40 + 90941950 TGTCTGTCTACGGAGAAATTGCCACGAAACAGCTTTATAT i papAnu2.chr10 C 0 I 322 s chlSab2.chr19 18699250 40 + 33263144 TGTCTGTCTACGGATAAATTGCCACGAAACAGCTTTATAT i chlSab2.chr19 C 0 I 308 s calJac3.chr1 198403026 40 + 210400635 TGTCTGTCTACAGAGAACTTACCACACAACAGCTTTACAT i calJac3.chr1 C 0 C 0 s canFam3.chr10 41014691 30 - 69331447 ----------CAAAGGAATTTCCATGAAACAGCTTTACTC i canFam3.chr10 C 0 C 0 e mm10.chr15 77224678 508 + 104043685 I a score=2610688.000000 s hg38.chr22_KI270876v1_alt 249309 780 + 263666 AGAAGCTACAGT-------T-TAAAAAAATA---AAAGCCAATGAACCTAGCTGATCCTC-ACTCTGCCATATACCTTAGGACATGCAGAAAGCAGCACAATTTCTCTTCATCACATGAAG-AGCTTTCCTGCCCAAACATGCTTGCCACCAAGCATCGGGAGAAGGCTG---TAGCCAAGCACGAAGCCACTACAAACCTGCAAATCTTCTTTGAAGGAACCACCAGGCCTCAGCAGAG--AGGCAAATGCCTGTTTTCATAGTTGCTTTCATAAAATAGTTATTCAGAATTTATGCAAACTTAGCAAATATGGATGAAA--ACAATTCTGTTTTCTTTTATTG-GAGAAGGACGAAGATACATATTACAAAACCTCATAACtgag-aacaaatatttgcaaattgtaaatctgacaaagaacttgtacccagaatatataaagacttcttacaactcaataagaagaaa----aaccaaataaaaagtg-----ggcaaaagacctgaatagacatctcaccaaagcaaac--ataagtggctgataagcacatgaaaaggtacc------tacttaattattagggaaatgcaaattaaaccacaatgagctattaccatacactcattataa-c-aaaaagttagataaaaccaagccactttggaaaacagtctgtggtttctttaaaagttatgcatga----ggccaCGTTGTCTCAAgctggtaataccagctactcagggaggctgagacaggaggatcacttgaggcaggagttcaaagctaaattgaactatgattgcaccaccacactccagc s panTro4.chr22 34629534 780 + 49737984 AGAAGCTACAGT-------T-TAAAAAAATA---AAAGCCAATGAACCTAGCTGATCCTC-ACTCTGCCATATACCTTAGGACATGCAGAAAGCAGCACAATTTCTCTTCATCACATGAAG-AGCTTTCTTGCCCAAACATGCTTGCCACCAAGCATCTGGAGAAGGCTG---TAGCCAAGCACGAAGCCACTACAAATCTGCAAATCTTCTTTGAAGGAACCACCAGGCCTCAGCAGAA--AGGCAAATGCCTGTTTTCATAGTTGCTTTCATAAAATAGTTATTCAGAATTTATGCAAACTTAGCAAATATGGATGAAA--ACAATTCTGTTTTCTTTTATTG-GAGAAGGAAGAAGATACATATTACAAAACCTCATAACtgag-aacaaatatttgcaaattgtaaatctgacaaagaacttgtacccagaatatataaagacttcttataactcaataagaagaaa----aaccaaataaaaagtg-----ggcaaaagacctgaatagacatctcaccaaagcaaac--ataagtggctgataagcacatgaaaaggtacc------tacttaattattagggaaatgcaaattaaaccacaatgagctattaccatacactcattataa-c-aaaaagttagataaaaccaagccactttggaaaacagtctgcggtttctttaaaagttatgcatGA----ggccacgttgtctcaagctggtaataccagctactcagggaggctgagacaggaggatcacttgaggcaggagttcaaagctaaattgaactatgattgcaccaccacactccagc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31049439 783 + 46535552 AGAAGCTACAGT-------T-TAAAAAAATA---AAAGCCAATGAACCTAGCTGATCCTC-ACTCTGCCATATACCTTAGGACATGCAGACAGCAGCACAATTTCTCTTCATCACATGAAG-AGCTTTCTTGCCCAAACATGCTTGCCACCAAGCATCTGGAGAAGGCTG---TAGCCAAGCACGAAGCCACTACAAACCTGCAAATCTTCTTTGAAGAAACCaccaggcctcagcagag--aggcaaatgcctgttttcatagttgctttcatgaaatagttattcagaatttatccaaaCTTAGCAAATATGGATGGAA--ACAATTCTGCTTTCTTTTATTA-GAGAAGGAAGAAGATATGTATTACAAAACCTCATAACtgag-aacaaatatttgcaaattgtaaatctgacaaagaacttgtacccaga--atataaagacttcttacaactcaataagaagaaa----aaccaaataaaaagtg-----ggcaaaagacctgaatagacatctcaccaaagcaaac--atgagtggctgataagcacatgaaaaggtatc------tacttaattattagggaaatgcaaattaaaccacaatgagctattaccatacactcattataa-caaaaaagttagataaaaccaagccactttggaaaacagtctgcagtgtctttaaaagttatgcatGAGgctggccatgctgtctcaagctggtaataccagctactcaggaaggctgagacaggaggatcacttgaggcaggagttcgaagctaaactgaactatgattgcaccaccgcactccagc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100606339 761 - 115148730 AGAAGCTACAGT-------T-AAAAAAAATA---AAAGCCAATGAACCTAA----------------------ACCTTAGGACATGCAGAAAGCAGCACAATTTCTCTTCAT-ACATGAAG-AGCTTTCTCGCCCAAACATGCTTGCCACCAAGCATCTGGAGAAGGCTG---TAGCCAAGCACGAAGCCACTACAAACCTGCAAATCTTCTTTGAAGGAACCACCAGGCCTCAGCAGAG--AGGCAAATGCCTGTTTTCATAATTGCTTTCATAAAATAGCTATTCAGAGTTTATGCAAACTTAGCAAATATGGATGAAA--ACAATTCTGTTTTCTTTTATTG-GAGAAGGAAGAAGATACATATTACAAAACCTCATAACtgag-aacaaatatttgcaaattgtaaatctgacaaagaacttgtacccagaatatataaagacttcgtacaactcagtaagaagaaa----aaccaaataaaaagtg-----ggcaaaagacctgaaaagacatctcaccaaagcaaac--atcagtggctgataagcacatgaaaaggtacc------tacttaattattagggaaatgcaaattaaaccacaatgagctgttaccatacactcattataa-caaaaaagttagataaaaccaagccactttggaaaacagtctgcagtttcttT--AAGTTATGCATGAGgctggccatgttgtctcaagctggtaataccagctactcagggaggctgagacaggaggatcacttgaggcaggagttcaaagctaaattgaactatgattgcaccaccgcactccagc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80747672 786 + 95678458 agaaGTTACAGT-------T-TAAAAAAATA---AAAGCCAATGAACCTAGCTGATCCTC-ACTCTGCCATATCCCTTAGGACATGAAGAAAGCAGCACAATTTCTCTTCATCACATTAAG-AGCTTTCTTGTCCAAACATGCTTGCCACCAAGCATCTGGAGAAAGCTG--TTAGCCAAGCACGAAGCCACTACAAACCTGCAAATCTTCCTTGAAGGAACCACCAGGCCTCAGCAGAG--AGGCAAATGCCTGTTTTCATAGTCGCTTTCATAAAATAGTTATTCAGAATTTATCCAAACCTAGCAAATATGGATGAAA--ACAATTCTGTTTTCTTTTATTG-GAGAAGGAAGAAGATACGTATTACAAAATCTCATAACtgag-aacaaatatttgcaaactgtaaatctgaccaagaatttgtacccagaatatacaaagacttcttacaactcagtaagaagaaa----aaccaaataaaaactg-----ggcaagaaacctgaacagacatctcaccaaagcaaac--atgagtggctaacaagcacatgaaaaggtacc------tacttaattattacggaaatgcaaattaaaccacaatgagctattaccatacagtcattacaa-caaaaaagttagataaaaccaaaccactttggaaaatagtctgcagtttctttaaaagttatgcatGAGgctggccatggtgtctcaagctggtaataccagctactcagggaggctgagaaaggaggatcacttcaggtaggagttcaaagctaaattgaactatgattgcaccactgcactccagc i rheMac3.chr10 I 314 C 0 s macFas5.chr10 81174264 786 - 96509753 agaaGTTACAGT-------T-TAAAAAAATA---AAAGCCAATGAACCTAGCTGATCCTC-ACTCTGCCATATCCCTTAGGACATGAAGAAAGCAGCACAATTTCTCTTCATCACATTAAG-AGCTTTCTTGTCCAAACATGCTTGCCACCAAGCATCTGGAGAAAGCTG--TTAGCCAAGCACGAAGCCACTACAAACCTGCAAATCTTCCTTGAAGGAACCACCAGGCCTCAGCAGAG--AGGCAAATGCCTGTTTTCACAGTCGCTTTCATAAAATAGTTATTCAGAATTTATCCAAACCTAGCAAATATGGATGAAA--ACAATTCTGTTTTCTTTTATTG-GAGAAGGAAGAAGATACGTATTACAAAATCTCATAACtgag-aacaaatatttgcaaactgtaaatctgaccaagaatttgtacccagaatatataaagacttcttacaactcagtaagaagaaa----aaccaaataaaaactg-----ggcaagaaacctgaacagacatctcaccaaagcaaac--atgagtggctaacaagcacatgaaaaggtacc------tacttaattattatggaaatgcaaattaaaccacaatgagctattaccatacagtcattacaa-caaaaaagttagataaaaccaaaccactttggaaaatagtctgcagtttctttaaaagttatgcatGAGgctggccatggtgtctcaagctggtaataccagctactcagggaggctgagaaaggaggatcacttcaggtaggagttcaaagctaaattgaactatgattgcaccactgcactccagc i macFas5.chr10 I 317 C 0 s papAnu2.chr10 76430418 786 + 90941950 agaagttacagt-------t-taaaaaaata---aaagccaatgaACCTAGCTGATCCTC-ACTCTGCCATATCCCTTAGGACATGAAGAAAGCAGCACAATTTATCTTCATCACATTAAG-AGCTTTCTTGTCCAAACATGCTTGCCACCAAGCATCTGGAGAAAGCTG--TTAGCCAAGCACGAAGCCACTACAAACCTGCAAATCTTCCTCGAAGGAACCACCAGGCCTCAGCAGAG--AGGCAAATGCCTGTTTTCATAGTCGCTTTCATAAAATAGTTATTCAGAATTTATCCAAACCTAGCAAACATGGATGAAa--acaattctgttttcttttattg-gagaaggaagaagataCATATTACAAAATCTCAtaactgag-aacaaatatttgcaaactgtaaaTCTGACCAAGAATttgtacccagaatatataaagacttcttacaactcagtaagaagaaa----aaccaaataaaaactg-----GGCAAGAAACCTGAACAAACATCTCACCAAAGCAAAC--ATGAGTGgctaacaagcacatgaaaaggtacC------TACTTAATTATTacggaaatgcaaattaaaccacaatgagctattacCATACAGTCATTACAA-CAAAAAAGTTAGATAAAAccaaaccactttggaaaatagtctgcagtttctttaaaagttatgCATGAGGCTGGCCATGGTGTCTCAAGCTGgtaataccagctactccgggaggctgagaaaggaggatcacttcaggtaGGAGTTCAAAGCTAAattgaactatgattgcaccactgcactccagc i papAnu2.chr10 I 322 C 0 s chlSab2.chr19 18699598 786 + 33263144 agaaGTTACAGT-------T-TAAAAAAATA---AAAGCTAATGAACCTAGCTGATCCTC-ACTCTGCCATATCCCTTAGGACATGAAGAAAGCAGCACAATTTCTCTTCATCACATTAAG-AGCTTTCTTGTCCAAACATGCTTGCCACCAAGCATCTGGAGAAAGCTG--TTAGCCAAGCACAAAGCCACTACAAACCTGCAAATCTTCCTTGAAGGAACCACCAGGCCTCAGCAGAG--AGGCAAATGCCTGTTTTCATAGTCGCTTTCATAAAATAGTTATTCAGAATTTATCCAAACCTAGCAAATATGGATGAAA--ACAATTCTGTTTTCTTTTATTG-GAGAAGGAAGAAGATACATATTACAAAATCTCATAACtgag-aacaaatatttgcaaactgtaaatctgaccaagaatttgtacccagaatatataaagacttcttacaactcagtaagaagaaa----aaccaaataaaaactg-----ggcaagaaacctgaacagacatctcaccaaagcaaac--atgactggctaacaagcacatgaaaaggtacc------tacttaattattacggaaatgcaaattaaaccacaatgagctattaccatacagtcattacaa-caaaaaagttagataaaaccaaacCACTTTGGAAAATAGTCTGCAGTTTCTTTAAAAGTTATGCATGAGgctggccatggtgtctcaagctggtaataccagctactcagggaggctgagaaaggaggatcacttcaggtaggagttcaaagctaaattgaactatgattgtaccactgcactccagc i chlSab2.chr19 I 308 C 0 s calJac3.chr1 198403066 773 + 210400635 AGAAGCTACAGT-------TAAAAAAAAATA---AAAGCCAATGAACCTAGCTGATCCTC-GCTCTGCCGCATCCCCTAAGACATGCAGAAAGCAGCACAATTTCTTTTCATTACATGAAGAAGCTTTCTTGTCCAAACATGCTTGCCACCAAGCATCTAGAGAAGGCTG---TAGCCAAGCATGAAGCCACTATAAACCTGCAAATCTTCCCTGAAGAAACCACCAGGCCTCAGCAGAG--AGGCAAATGCCTGT------------TTTCATAAAACAATTATTCAGAATTTATCCAAACTTAGCAAACATGAATGAAAACACAGTTCTGTTTTCTTTTATTG-gagaaggaagaagacacgtattacaaaatctc----ctgag-aacaaatatttgcaaattgtaaatctgataaagaatgtgtacccagaatatataaagaatccttagacttcaataagaagaaa----aaccaaataaaaagtg-----ggcaaaagacctgaatagacatctcaccaaagcaaac--atgagtggctaataagcacttgaaaaagtacc------tacctaattattagggaaatgcaaattaaaccacaatgggctattatcatacactcactgtaa-caaaaaagttagataaaaccaagCCACTTTGGAAAATAGTCTGCAGCTTCTTTAAATGTTATGCATGAGgctgggcatggtatctcaaacctgtaataccggctacacagggaggctgagacaggaggatcgcttcaggcaggagttcaaagctaaattgaactacagttgcaccaccacactccagc i calJac3.chr1 C 0 C 0 s canFam3.chr10 41014721 713 - 69331447 AGAAGCTACAGTGTCTTAGT-TAAAGGAGGAAATAAAGCCGTTGAACATGGCTGAACCTCTACCATATCACATCTCTTAGGACATGCAGAAATCAGCATAACTGCTCTTCACTACATGAAG-AGCTTTCTTGCCCAAATATGCCTGCCACTAAGGATC---AGGAGGCTATGTCAGCCAAACACAAAGCCACTGTAAACCTACCAATCTTCCTTGGAGCTATCACCAGGACTGAACAAAGACAGTTAAATGCCTGTTTCCACTGTCTCTGTCCTATAATAGTTA--CATAATTTATCCAAATTTAGCAAATAAGGATGAAA--ATA---TAGTTTTATTTTAATGAGGGGAGGGGAAAGATTTGTCTTGCAAAATCTcagaactgagaaaaaaatatttgcaaattataaatctgacaaagaacttgtatccaggatatataaagaactcttacaattcaataaaaggacaaatgaaccaaataaaaagtgggccaggcaaaagacttacacagatatctcaacaaagaaaacatatgaatggctaataagcaaatgaaaaggtaactttacatctttcagtattaggaaacagaaattaaaaccccaatgagctaccaatacatactctatataatcaaaaaaggtgggtaaaatcaagccactttggaaaatagtgtg-atcatttcttaaagtcaagcatga----------------------------------------------gctta---------------------------------ctatataaaac--------------------ccagc i canFam3.chr10 C 0 C 0 e mm10.chr15 77224678 508 + 104043685 I a score=270365.000000 s hg38.chr22_KI270876v1_alt 250089 112 + 263666 attggcgacCTCA-TTTCTCTTttattatgattattattattttattttatttattTTatttttgtatttctagtagagatggggtttaactgggttaaccaggctggtctca s panTro4.chr22 34630314 112 + 49737984 attggcgacCTAA-TTTCTCTTTTATTATGAttattattattttattttatttattttatttttgtatttctggtagagatggggtttcaccgggttaaccaggctggtctca i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31050222 94 + 46535552 actggcgacCTCA-TTTCTC---TATTATGATTATTA--------------TTATTTTatttttgtatttctagtagagatggggtttcaccgggtt-accaggctggtctca i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100607100 112 - 115148730 attggcgacCTCa-tttctcttttattatgattatgattattttattttatttattttatttttgtatttctagtagagatggggtttcactgggttaaccaggctggtctcg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80748458 109 + 95678458 attggcgacCTCATTTTCTCTTTTATTATGATTATTAAtattttatt----ttattttatttttgtatttctagtagagatgaggtttcaccgggttaacaaggctggtctcg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81175050 109 - 96509753 attggcgacCTCATTTTCTCTTttattatgattattaatattttatt----ttattTTatttttgtatttctagtagagatgaggtttcaccgggttaaccaggctggtctcg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76431204 103 + 90941950 attggcgacctca-tttctcttttattatgattattaa-----tatt----ttattttatttttgtatttctagtagagatgaggtttcaccgggttaaccaggctggtctcg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18700384 108 + 33263144 attggcgacCTCa-tttctcttttattatgattattaatattttatt----ttattTTatttttgtatttctagtagagatgaggtttcaccaggttaaccaggctggtctcg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198403839 87 + 210400635 attggcgacCTCA-TTTCTC-----------TTATTA--------------TTATTTTattttagtatttctagtagaaatgggatttcaatggattaactaggctggtttta i calJac3.chr1 C 0 C 0 e mm10.chr15 77224678 508 + 104043685 I e canFam3.chr10 41015434 0 - 69331447 C a score=1347895.000000 s hg38.chr22_KI270876v1_alt 250201 442 + 263666 aactcctgacctcaagtgatccacccacctcagcctcccaaagtgctgggattacaggcatgagccaccaca-cTGGCTT-ATTTCTCTTAAAAAGaagaaattatacatgagtttaccattgcctcagtaattccactcctagaaatctacccaagagaaattaaa--gtatgtcaacacacagatttgcaggtaattcttcatatcagcactattcataatagccaagttggaaacaatacaaatatctaccaactggtaaacaaataaacaaaaggtgatacatcactataatgaaatattatttagc-aaaaaaaaa-----taaaaaatgac-acagtgatacatactacaacctggatgaacctcaaaaacattatactaattgtaagaaatctcatgccaaagactacat--atatcatataattccatttatat-aaaatgtccaaaa s panTro4.chr22 34630426 437 + 49737984 aactcctgacctcaagtgatccac---cctcagcctcccaaagtgctgggattacaggcatgagccaccaca-cTGGCTT-ATTTCTCTTAAAAAGaagaaattatgcatgagattaccattgcctcagtaattccactcctagaaatctacccaagagaaattaaa--gtatgtcaacacacagatttgcaggtaattcttcatatcagcactattcataatagccaaattggaaacaatacaaatatctaccaactggtaaacaaataaacaaaaggtgatacatccctataatgaaatattatttagc-aaaaaaaa-------aaaaaatgac-acagtgatacatactacaacctggatgaacctcaaaaacattatactaattgtaagaaatctcatgccaaagactacat--atatcatataattccatttatat-aaaatgtccaaaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31050316 436 + 46535552 aactcctgacctcaagtgatccacccacctcagcctcccaaagtgctgggattacaggcatgagcccccgca-cTGGCTT-ACTTCTCTTAAAAAGaagaaattatgcatgagattaccattgcctcagtaattccactcctagaaatctacccaagagaaattaaa--gtatgtcaacacacagatttgcaggtaattcttcatatcagcactattcataatagccaaattggaaacaatacaaatatctaccaactggtaaacaaacaaacaaaaggtgatacatccctacaatgaaatattatttagc-aaaaaaaaa------aaaaaatgat-acagtgatacatactacaacctggatgaacctcaaaaacattatactaattgtaagaaatctcatgccaaagactatat-------atataattccatttatat-aaaatgtccaaaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100607212 446 - 115148730 aactcctgacctcaagtgatccacccacctcagcctcccaaagtgctgggattacaggcatgagccaccgca-cTGGCTT-ATTTCTCTTAAAAAGaagaagtcatgcatgagattaccattgcctcagtaattccactccta-aaatctacccaagagaaattaaa--gtatgtcaacacacagatttgcaggtaattcttcacatcagcactattcataatagccaaattggaagcaatacaaatatctaccaactggtaaacaaataaacaaaaggtgatacatccctacaatgaaatattatttagc-aaaaaaaaaaaaaaaaaaaaaagat-acagtgatacatactacaacctggatgaacctcaaaaacattatactaattgtaagaaatctcatgccaaagactacat--atatcatataattccatttatat-aaaatgtccaaaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80748567 436 + 95678458 aactcctgacctcaagtgatccacccaccttagcctcccaaagtgctgggattacagtcataagccacggca-ccGGCTTCGTTTCCCTTAAAAAGAAGAAATTATGCATGAGATTAGCATCGTctcagtaattccactcctagaaacctacccaagagaaattaaa--gtatgtcaacgcacagacttgcaggtaattcttcatatcagcactattcataatagccaaactggaaacaatacaaatatctaccagctggcaaacaaataaacaaaaggtgatacatccctacaattaaatattatttagc-aaaa-----------aaaaaatgat-atagtgatacataggacaacctggatgaacctcaaaaacattatagtaattgt-agaaatctcatgccaaagactatat--atatcatataattccatttatat-aaaatgtccaaaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81175159 436 - 96509753 aactcctgacctcaagtgatccacccaccttagcctcccaaagtgctgggattacaggcataagccacggca-ccGGCTTCGTTTCCCTTAAAAAGAAGAAATTATGCATGAGATTAGCATCGTctcagtaattccactcctagaaacctacccaagagaaattaaa--gtatgtcaacgcacagacttgcaggtaattcttcatatcagcactattcataatagccaaactggaaacaatacaaatatctaccagctggcaaacaaataaacaaaaggtgatacatccctacaattaaatattatttagc-aaaa-----------aaaaaatgat-atagtgatacataggacaacctggatgaacctcaaaaacattatagtaattgt-agaaatctcatgccaaagactatat--atatcatataattccatttatat-aaaatgtccaaaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76431307 436 + 90941950 aactcctgacctcaagtgatccacccaccttagcctcccaaagtgctgggattacaggcataagccacggca-CCGGCTTCGTTtcccttaaaaagaagaaattatgcaTGAGATTAGCATCGCctcagtaattccactcctagaaacctacccaagagaaattaaa--GTATGTCAACGCACAGACTTGCAGGTAATTCTTCATATcagtactattcataatagccaaactggaaacaatacaAATATCTACCAGCtggcaaacaaataaacaaaaggtgATACATCCctacaattaaatattatttagc-aaaa-----------aaaaaatgat-atagtgATACATAGGACAAcctggatgaacctcaaaaacattatagtAATTGT-AGAAATCTCATGCCAAAGactatat--atatcatataattccatttatat-aaaatgtccaaaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18700492 437 + 33263144 aactcctgacctcaagtgatccacccacctcagcctcccaaagtgctgggattacaggcataagccacggca-ccGGCTTCGTTTCCCTTAAGAAGAAGAAATTATGCATGAGATTAGCATCGCctcagtaattccactcctagaaacctacccaagagaaattaaa--gtatgtcaacgcacagacttgcaggtaattcttcatatcagcactattcataatagccaaactggaaacaatataaatgtctaccagccagcaaacaaataaacaaaaggtgatacatccctacaattaaatattatttagcaaaaa-----------aaaaaatgat-atagtgatacataggacaacctggatgaacctcaaaaacattatagtaattgt-agaaatctcatgccaaagactacat--atatcatataattccatttatat-aaaatgtccaaaa i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198403926 434 + 210400635 aacttctggcctcaagtaatccacctgcctcagcctcccaaagtgttgggattacaggcatgagccaccacacccagcTTCATTTCTCTTAAAAAGAAGAAATTATGCAGGAGAttaccattgcctcattaattccactcctagaaatctacccaagagaatttata--atatgtcaacacacagatttgcacataattgttcatatcagcactattcataatagccaaactggaaacaatacaaatctctatcaaccggtaaacaaataaacaaaaggtaatacatccctacaataaaa---tatttagc-aa-------------aaaaaatgat-acagtgacacatactataacctagatgaacctcaaaaacattatgctaatgataacaaatcacaagccaaagactacat--atatcatataattctatttatataaaaaagtccaaaa i calJac3.chr1 C 0 C 0 s canFam3.chr10 41015434 305 - 69331447 ---------------------------------------------------------------------------aactccactcct-------------------------------------------------------agaaatctacccaagagaaaataaaatatatgtctatatgaacatatgcaaatg----ttcataagagcattactcataatcaccaatctgaaaacaatccaattatctgccaactagtaaatggattaatgaaatgaagtacatccatatgaaagaatactattcagc-aac------------aaagagtaatgacagtgatacat---acaacatagatgaacctcaaaaacactatgctaaatgacagaaatcacacacaaaagcctgcatacatatcatatgatcccatttacat-gaaatgtccagaa i canFam3.chr10 C 0 C 0 e mm10.chr15 77224678 508 + 104043685 I a score=431624.000000 s hg38.chr22_KI270876v1_alt 250643 154 + 263666 gcgacca-------ttttttttgttttttttgagacatggtctcgctgtgttgcccacgctggtcttgaactcctgggctcaaaggatcctcctgcctcggcctcccaaagtactggtatacaggcatgagctaccgtgtccagcacaaaagaggcaattt s panTro4.chr22 34630863 154 + 49737984 gagacga-------ttttttttgttttttttgagacatggtctcgctgtgttgcccacgctggtcttgaactcctgggctcaaaggatcctcctgcctcggcctcccaaagtactgggatacaggcatgagctaccgtgtccagcacaaaagaggcaattt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31050752 161 + 46535552 gagacaattttttttttttttttttttttttgagacatggtcttgctgtgttgcccacactggtcttgaactcctgggctcaaaggatcctcctgcctcggcctcccaaagtactgggatacaggcatgagctaccgtatccagcacaaaagaggcaattt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100607658 156 - 115148730 gagacaa-----ttttttttttttcttttttgagacatggtctcgctgtgttgcccacgctggtcttgaactcctgggctcaaaagatcctcctgcctcggcctcccaaagtactgggatacaggcatgagctaccgtgtccagcacaaaagaggcaattt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80749003 152 + 95678458 gagaca---------atttttttctttttaaaagacatggtcttgctatgttgcccacgctggtcttgaactcctgggctcaaaggatcctcctgccttggcctcccaaagtactgggatacaggcgtaaactactgtgcccagcacaaaagaggcaattt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81175595 152 - 96509753 gagaca---------atttttttctttttaaaagacatggtcttgctatgttgcccacgctggtcttgaactcctgggctcaaaggatcctcctgccttggcctcccaaagtactgggatacaggcgtaatctaccgtgcccagcacaaaagaggcaattt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76431743 155 + 90941950 gagacat------tttttttttttttttttaaagacatggtctcgctatgttgcccacgctggtcttgaactcctgggctcaaaggatcctcctgccttggcctcccaaagtactgggatacaGGCATAATCTACCGTGCCCAGCACAAGAGAGGCAATTT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18700929 155 + 33263144 gagacct------tttttttttttttttttaaagacatggtctcgctgtgttgcccacgctggtcttgaactcctgggctcaaaggatcctcctgccttggcctcccaaagtactgaaatacaggcataagctaccgtgcccagcacaaaagaggcaattt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198404360 161 + 210400635 gaaacatttttttttttttttttttttttttgagaccgggtcttactgtgttgcccaggctggtcctgaactcctgggctcaagtgatcctcctgccttggcttcccaaagtgttgggatacaggggtgagccaccacgcccagcccaaaagagacaattt i calJac3.chr1 C 0 C 0 e mm10.chr15 77224678 508 + 104043685 I e canFam3.chr10 41015739 0 - 69331447 C a score=505621.000000 s hg38.chr22_KI270876v1_alt 250797 162 + 263666 tataaagtcagaaagcagagcagtggttggctgggggagagagggaggactggagagggagcagggaatgactgcaaaagaatttgaaagaatttgg-ggaatg------------agggaaatgtactaaagctggactgtg---------acacaactctatacgtttactaaatatcactg s panTro4.chr22 34631017 162 + 49737984 tataaagtcagaaagcagagcagtggttggctgggggagagagggaggactggagagggagcagggaatgactgcaaaagaatctgaaagaatttgg-ggaatg------------agggaaatgtactaaagctggactgtg---------acacaactctatacgtttactaaatatcactg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31050913 161 + 46535552 tataaagtcagaaagcagagcagtggttggctgggggagagagggaggactggagagggagcagggaatgactgcaaaagaatttgaaagaatttgg-ggaatg------------agggaaatgcactaaaactggactgtg---------acacaactctgta-atttactaaatatcactg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100607814 162 - 115148730 tataaagtcagaaagcagagcagtggttggctaggggagagagggaggactggagagggagcagggaatgactgcaaaagaatttgaaagaatttgg-ggaatg------------agggaaatgtactaaaactggactgtg---------acacaactctacatgtttactaaatatcactg i nomLeu3.chr7b C 0 M 100 s rheMac3.chr10 80749155 161 + 95678458 tatgaagtcagaaagcagagcagtagct-gctgggggagagagggaggactggagagggagcagggaatgactacaaaagaatttgaaagaatttag-gaaatg------------agggaaatgtactaaaactggactgtg---------acacaatgctatatgtttattaagtatcactg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81175747 161 - 96509753 tatgaagtcagaaagcagagcagtagtt-gctgggggagagagggaggactggagagggagcagggaatgactacaaaagaatttgaaagaatttag-gaaatg------------agggaaatgtactaaaactggactgtg---------acacaatgctatatgtttattaagtatcactg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76431898 161 + 90941950 TATGAAGTCAGAAAGCAGAGCAGTAGTT-gctgggggagagagggaggactGGAGAGGGAGCAGGGAATGACTACAAAAGAATTTGAAAGAATTTGG-GAAATG------------AGGGAAATGTACTAAAACTGGACTGTG---------ACACAATGCTATATGTTTATTAAGTATCACTG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18701084 161 + 33263144 tatgaagtcagaaagcagagcagtagtt-gctgggggggagagggaggactggagagggagcagggaatgactacaaaagaatttgaaagaatttgg-gaaatg------------agggaaatgtactaaaactgggctgtg---------acataatgctatatgtttattaagtatcactg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198404521 161 + 210400635 tat-acgtcagaaagcaaaacagtggtt-gctggcggggagagagaggactggagagggagcaaggaaggactacaaaagaatttgaaagaacttagaggaatc------------atagaaatgtactaaaactggactgtg---------gcacaactctatatatttaccaaatatcactg i calJac3.chr1 C 0 C 0 s canFam3.chr10 41015739 165 - 69331447 tagatagtcaggaagcagatcagcagtt-gcctgggagtggggtgagaatggga----------------actgcaaaaaatttcaagaaaattttg-ggggtggcacagggtattatggaaatgttcaaaacccaaactgtggtgatggtagcataactctataaattttatatg-atcattg i canFam3.chr10 C 0 C 0 e mm10.chr15 77224678 508 + 104043685 I a score=146719.000000 s hg38.chr22_KI270876v1_alt 250959 53 + 263666 aacaagt-cacttacattgagtaaatttta-ggt-atagaaatgacatcttaatag s panTro4.chr22 34631179 53 + 49737984 aacaagt-cacttacattgagtaaatttta-ggt-atagaaatgacatcttaatag i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31051074 53 + 46535552 aacaagt-catttacattgagtaaatttta-ggt-atagaaatgacatcttcatag i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80749316 53 + 95678458 aacaagt-cacttacattgagtaaatttca-ggt-atagaaatgacatcttaatag i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81175908 53 - 96509753 aacaagt-cacttacattgagtaaatttca-ggt-atagaaatgacatcttaatag i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76432059 53 + 90941950 AACAAGT-CACTTACATTGAGTAAATTTCA-GGT-ATAGAAATGACATCTTAAtag i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18701245 53 + 33263144 aacaagt-cacttacattgagtaaatttca-ggt-atagaaatgacatcttaatag i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198404682 53 + 210400635 aacaaat-ctcttatattggataaatttta-ggt-ataaaaatgacatcttaatag i calJac3.chr1 C 0 C 0 s canFam3.chr10 41015904 56 - 69331447 aataagtatacttacattgaatgacttttatggtaatagaaattgcatctcaataG i canFam3.chr10 C 0 I 224 e mm10.chr15 77224678 508 + 104043685 I e nomLeu3.chr7b 100607976 100 - 115148730 M a score=63104.000000 s hg38.chr22_KI270876v1_alt 251012 38 + 263666 aactttttttttttttttttt--------ttttgagacggagtctc s panTro4.chr22 34631232 35 + 49737984 aac---ttttttttttttttt--------ttttgagatggagtctc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31051127 37 + 46535552 aac-ttttttttttttttttt--------ttttgagacacagtctc i ponAbe2.chr22 C 0 C 0 s rheMac3.chr10 80749369 45 + 95678458 aac-tttttttgtttggttttggttttggttttgagatggagtctc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81175961 45 - 96509753 aac-tttttttgtttgtttttggttttggttttgagatggagtctc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76432112 45 + 90941950 aac-tttttttgtttgtttttggttttggttttgagatggagtctc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18701298 45 + 33263144 aac-tttttttgtttgtttttggttttggttttgagatggagtctc i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198404735 32 + 210400635 aac-tttttttttttt-------------tttggagacagagtctt i calJac3.chr1 C 0 C 0 e mm10.chr15 77224678 508 + 104043685 I e canFam3.chr10 41015960 224 - 69331447 I e nomLeu3.chr7b 100607976 100 - 115148730 M a score=1584636.000000 s hg38.chr22_KI270876v1_alt 251050 551 + 263666 actctgtcgcccaggctcgagtgcagtggcataatctcagctcactgcaacctccgcctcctgggttcaagcgattctcgtgcctcagctcccaagtagctggga--ttacaggcacccgccaccatgccccactaatttttgtatttttagtagagatagggtttccccatgttggccaggctggtttcgagctccagacctcaggtgattcccccgccgcagtctcccaaagtgctgggattacaggcgtgagccactgcg-ctggccATAGAGCTTTTTAAAAAGCAACAGCCAAATACATATTTATATTTATTTTCTCTACA----tagtaactccaagggaaacaaatatgtaagacaggcaaagtaataatattttgtttggatataaaa----taaatagtcata-----ataattattatatattcacaaatcaataaatattgatttgacccaaaaaatggctttattagaaggaaaga----ggTCTATAAAACTGCTAATTTCTgggcaggcgcagtggctcatacctgtaatcccagcactttgggaggctgaagcagg s panTro4.chr22 34631267 551 + 49737984 acgctgtcgcccaggctcgagtgcagtggcataatctcagctcactgcaacctccgcctcctgggttcaagcgattctcgtgcctcagctcccaagtagctggga--ttacaggcacccgccaccatgccccattaatttttgtattttcagtagagatagggtttccccatgttggccaggctggtttcgagctccagacctcaggtgattcccccaccgcagtctcccaaagtgctgggattacaggcgtgagccactgcg-ctggccATAGAGCTTTTTAAAAAGCAACTGCCAAATACATATTTATATTTATTTTCTCTACA----CAGtaactccaagggaaacaaatatgtaagaaaggcaaagtaataatattttgtttggatataaaa----taaatagtcata-----ataattattatatattcacaaatcaataaatattgatttgacccaaaaaatggctttattagaaggaaaga----gATCTATAAAACTGCTAATTTCTggccaggcacagtggcttatacctgtaatcccagcactttgggaggctgaagcagg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31051164 564 + 46535552 aatctgtctcccaggctggagtgcagtggcataatctcagctcactgcaacctccacctcctgggttcaagcgattctcatgcctcagctcccaagtagctggga--ttacaggcatgtgccaccatgccccactaatttttgtatttttaataaagatcaggtttccccatgttggccaggctggtttcgagcgccagacctcaagtgattcccccgccgcaatctcccaaagtgctgggattacaggcatgagccactgcg-ctggccATAGAGCTTTTTAAAAAGCAATTGCCAAATACATATTTATATTCATTTTCTCTATATAGTCAGtaactccaagggaaacaaatatgtaagaaaggcaaagtaataatattttgtttggatataaaatatttaaatagtcataataatataattattatatattcatAAATCAATAAATATTGATTTGACCCAAAAAATGGCTTTATTAGAAGGAAAGA----GGTCTATATAACTGCTAATTTCTggccaggcgcagtggctcatacctgtaatcccagcactttgggaggctgaagcagg i ponAbe2.chr22 C 0 M 317 s nomLeu3.chr7b 100608077 559 - 115148730 Actctgtcgcacaggctggagtgcagtggcataatctcagctcactgcaacctctgcctcctgggttcaggcgattcttgtgcctcagctcccaagtagctggga--ttacaggcacccaccaccacgccccactaatttttgtatttttagtagagatagggtttccccatgttggccaggctggtttcgagctccagacctcaggtgattcccccgccgcagtctcccaaagtgctgggattacaggcgtgagccactgcg-cTAGCCATAGAGCTTTCTAAAAAGCAATTGCCAAATACGTATTTATATTTATTTTCTCTACA----tagtaactccaagggaaacaaatatgtaagaaaggcaaagtaataacattttgtttggatataaaatatttaaatagtcataataatataattattatatattcacaaatcaataaatattgatttgaccc-aaaaatggctttattagaaggaaaga----gttctataaaactgctaatttctggccaggcgcagtggctcatacctgtaatcccagcactttgggaggctgaagcagg i nomLeu3.chr7b M 100 C 0 s rheMac3.chr10 80749414 564 + 95678458 actctgtcacccaggatggagttcagtggcatgatctcagcgcactgcaacctccgcctcctgggtttaagcaattcttgtgcctcagctcccaaggagctggga--ttacaggcacccgccaccacgcccaactaacttttgtatttttagtagagatagggtttccccacattgaccaggctggtttcgagctccagacctcaggtgattcccccgccacgatctcccaaagtgctgggact--gggcgtgagccaccgtg-ctggccATAGAGCTTTTTAAAAAGCAATTGCCAAATACTTATTTATATTTATTTTCTCTATatagttagtaactccaagggaaacaaatatggtagaaaggcaaagtaataatattttgtttggatataaaatatttaaatagtcataataatataattattatgtattcacaaatcagtaaatactgatttgacccaaaaaatggcttcactagaaggaaaga-gagggtctata-aactgttaatttctggccaggcgcagtggctcatccctgtaatcccagcactttgggaggctgaagcaag i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81176006 564 - 96509753 actctgtcacccaggatggagttcagtggcatgatctcagcgcactgcaacctccgcctcctgggtttaagcaattcttgtgcctcagctcccgaggagctggga--ttacaggcacccgccaccacgcccaactaacttttgtatttttagtagagatagggtttccccacattgaccaggctggtttcaagctccagacctcaggtgattcccccgccacgatctcccaaagtgctgggact--gggcgtgagccaccgtg-ctggccatagagctttttaaaaaGCAATTGCCAAATACTTATTTATATTTATTTTCTCTATatagttagtaactccaagggaaacaaatatgttagaaaagcaaagtaataatattttgtttagatataaaatatttaaatagtcataataatataattattatgtattcacaaatcagtaaatactgatttgacccaaaaaatggcttcactagaaggaaaga-gagggtctata-aactgttaatttctggccaggcgcagtggctcatacctgtaatcccagcactttgggaggctgaagcaag i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76432157 564 + 90941950 actctgtcacccaggatggagttcagtggcatgatctcagcgcactgcaacctccgcctcctgggttcaagcaattcttgtgcctcagctcccgaggagctggga--ttacaggcacccgccaccacgcccaactaacttttgtatttttagtagagatagggtttccccacattgaccaggctggtttcgagctccagacctcaggtgattcccccaccacgatctcccaaagtgctgggact--gggcgtgagccaccgtg-ctggccatagagctttttaaaaagcaattgccaaatacttatttatatttattttctctatatagtTAGTAACTCCAAGGGAAACAAATATGTTAGAAAGGCAaagtaataatattttgtttggatataaaatatttaaatagtcataataatataattattatgtattcaCAAATCAGTAAATACTGATTTGACCCAAAAAATGGCTTCACTAGAAGGAAAGA-GAGGGTCTATA-AACTGTtaatttctggccaggcgcagtggctcatacctgtaatcccagcactttgggaggctgaagcaag i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18701343 564 + 33263144 actctgtcacccaggatggagttcagtggcatgatctcagcgcactgcaacctccgcctcctgggttcaagcaattcttgtgcctcagctcccgaggagctggga--ttacaggcacccgccaccacgcccaactaacttttgtatttttagtagagagagggtttccccacattgaccaggctggtttcgagctccagacctcaggtgattcccctgccacggtctcccaaagtgctgggact--gggcgtgagccatcgtg-ctggccatagagctttttaaaaaGCAATTGCCAAATACTTATTTATATTTATTTTCTCTATATAGTTAGTAACTCCAAGGGAAACAAATATGTTAGAAAGGCAAAGTAATAATATTTTGTTTGGATATAAAATATTTAAATAGTCATAATAATATAATTATTATGTATTCACAAATCAGTAAATACTGATTTGACCCAAAAAATGGCTTCACTAGAAGGAAAGA-GAGGGTCTATA-AACTGTTAATTTCTggccaggcgcagtggctcatacctgtaatcccagcactccgggaggctgaagcaag i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198404767 554 + 210400635 gctctgtcacccaggct----tgcagtggtgtgatctcggctcactgtaacctctgcctc------ttaagtgattttcatgcctcggctcctgaatagctgggattttacaggcacctgccaccaggccctgctaatttttgtatttttagtagagacggagtttccccatgttggccaggttggttttgagctcctgaccccaagtgatccccctgactcagcctcccaaaatcctgggattacaggcatgagatactgtgtccggccACACAGCTTTTTAAAAAGCAATTGCCAAATACATATTTATATTTATTTTTTCTATCTATttagtaactccaggggaaacaaatacataagag----aaagtaataatattttgtttggatataaaatatttaaatagtcatagtaa---aattattgtgtactcataaatcaataaatattggtttgactaaaaaaatggctttattagaaggaaaggggggggtctataaaactgctaatttctggccaggtgcggtggctcatggctgtaatccaagcactttgggaggttaaaacagg i calJac3.chr1 C 0 C 0 e mm10.chr15 77224678 508 + 104043685 I e canFam3.chr10 41015960 224 - 69331447 I a score=406199.000000 s hg38.chr22_KI270876v1_alt 251601 188 + 263666 cggatcacttgaggtcaggagttcgagatcagcctggccaacacagaggaaccccatctctactaaaaatataaaaagtagtcgggtttggtggtgtgcgcctgtaatgccagctacaggggaggatgaggcacaagaatcacttgtacccaggaggcggaggttgcagtaagccaagatgacacacc s panTro4.chr22 34631818 188 + 49737984 cggatcacttgaggtcaggagttcgagatcagcctggccaacacagaggaaccccatctttactaaaaatataaaaagtagtcgggtttggtggtgtgcgcctgtaatgccagctacaggggaggctgaggcacaagaatcacttgtacccaggaggcggtagttgcagtaagcagagatgacacacc i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100608636 188 - 115148730 cggatcacttgaggtcaggagttcgagatcagcctggccaacatagaggaaccccatctctactaaaaatataaaaagtagtcgggtttggtggcgtgcgcgtgtaatgccagctacagatgaggctgaggcacaagaatcacttgtacccgggaggcggaggttgcagtaagccgagatgacacacc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80749978 186 + 95678458 tggatcacttgaggtcaggagttcgagatcagcctggccaacatggaggaaccccatctctaataaaaatgcaaaaattagttgggtttggtggcgtgcgcctgtaatcccagctacaggggaggctgaggcacaataatcacttgtatccgggaggcggaggttgcagtgagccgagat--cacacc i rheMac3.chr10 C 0 I 2 s macFas5.chr10 81176570 186 - 96509753 tggatcacttgaggtcaggagttcgagatcagcctggccaacatggaggaaccccatctctactaaaaatgcaaaaattagttgggtttggtggcgtgcgcctgtaatcccagctacaggggaggctgaggcacaataatcacttgtatccgggaggcggaggttgcagtgagccgagat--cacacc i macFas5.chr10 C 0 I 2 s papAnu2.chr10 76432721 186 + 90941950 cagatcacttgaggtcaggagttcgagatcagcctggccaacatggaggaaccccatctctactaaaaatgcaaaacttagttGGGtttggtggcgtgcgcctgtaatcccagctacaggggaggctgaggcacaataatcacttgtatccgggaggcggaggttgcagtgagccgagat--cacacc i papAnu2.chr10 C 0 I 2 s chlSab2.chr19 18701907 186 + 33263144 cggatcacttgaggtcaggagttcgagatcagcctggcaaacatggaggaatcccatctctactaaaaatgcaaaaattagttgggtttggtggcgtgcgcctgtaatcctagctacaggagaggctgaggcacaataatcacttgtattcgggaggcggaggttgcagtgagccgagat--cacacc i chlSab2.chr19 C 0 I 2 s calJac3.chr1 198405321 180 + 210400635 cagattccttaagttcaggagttccatattggcccggccaacatggagaaaccccatctctactaaaactacaaaaattagtcaggtttggtggcatgaacctgtaattccagctacttgggaggctgaggcatgagactcacttgaacccaggaagcagaggttacaatgagccaagac-------- i calJac3.chr1 C 0 C 0 e mm10.chr15 77224678 508 + 104043685 I e canFam3.chr10 41015960 224 - 69331447 I e ponAbe2.chr22 31051728 317 + 46535552 M a score=91687.000000 s hg38.chr22_KI270876v1_alt 251789 32 + 263666 tgcactcctgcctgggcaacacaacaagacct s panTro4.chr22 34632006 32 + 49737984 tgcactccagcctgggcaacacaacaagacct i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31052047 32 + 46535552 tgcactccagcctgggcaacacaacaagacct i ponAbe2.chr22 M 317 C 0 s nomLeu3.chr7b 100608824 32 - 115148730 tgcattccagcctgggcaacacaacaagacct i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80750166 32 + 95678458 tgcactccagcctgggtgacacaacgagacct i rheMac3.chr10 I 2 C 0 s macFas5.chr10 81176758 32 - 96509753 tgcactccagcctgggtgacacaacgagacct i macFas5.chr10 I 2 C 0 s papAnu2.chr10 76432909 32 + 90941950 tgcactccagcctgggtgacacaatgagacct i papAnu2.chr10 I 2 C 0 s chlSab2.chr19 18702095 32 + 33263144 tgcactccagcctgggtgacacaacgagacct i chlSab2.chr19 I 2 C 0 s calJac3.chr1 198405501 32 + 210400635 tgcaccccagcctgggctacagagtgagactc i calJac3.chr1 C 0 C 0 e mm10.chr15 77224678 508 + 104043685 I e canFam3.chr10 41015960 224 - 69331447 I a score=65807.000000 s hg38.chr22_KI270876v1_alt 251821 29 + 263666 tgtctcaaaaaataaaa-----ataaaataaaat s panTro4.chr22 34632038 29 + 49737984 tgtctcaaaaaataaaa-----ataaaataaaat i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31052079 29 + 46535552 tgtctcaaaaaataaaa-----ataaaataaaat i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100608856 24 - 115148730 tgtctcaaaaaata----------aaaataaaat i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80750198 24 + 95678458 tgtctcaaaaaata----------aaaataaaat i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81176790 24 - 96509753 tgtctcaaaaaata----------aaaataaaat i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76432941 24 + 90941950 tgtctcaaaaaata----------aaaataaaat i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18702127 24 + 33263144 tgtctcaaaaaata----------aaaataaaat i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198405533 29 + 210400635 tgtcttaaaaaataaaa-----ataaaataaaat i calJac3.chr1 C 0 C 0 s mm10.chr15 77225186 34 + 104043685 TGACTTAAGAAATAATGAATTTATTAGATGGAAG i mm10.chr15 I 508 C 0 e canFam3.chr10 41015960 224 - 69331447 I a score=503965.000000 s hg38.chr22_KI270876v1_alt 251850 142 + 263666 aaaaT-Tgctaat---------ttctcatcttcaacagtaggaagccaaagaatagtgccaaaatttggacaaatcatgaaacagcagaataagcatattacttag---catggcagtgagcagcagaagaaataaaacagtCTTTCCT-GGAGTG s panTro4.chr22 34632067 142 + 49737984 aaaaC-Tgctaat---------ttctcatcttcaacagtaggaagccaaagaatagtgccaaaatttggacaaatcatgaaacagcagaataagcatattacttat---catggcagtgagcagcagaagaaataAAATGGTCTTTCCC-GGAGTG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31052108 142 + 46535552 aaaaC-Tgctaat---------ttctcatcttcaacagtaggaagccaaagaatagtgccaaaacttggacaaatcacgaaacagcagaataagcatattacttag---catggcagtgagcagcagaagaaataAAATGGTCTTTCCC-GGAGTG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100608880 142 - 115148730 aaaac-tgctaat---------ttctcatcttcaacagtaggaagccaaagaatagtgccaaaatttggacaaatcatgaaacagcagaataagcatattacttag---catggcagtgagcagcagaagaaataAAATGGTCTTTCCC-GGAGTG i nomLeu3.chr7b C 0 I 163 s rheMac3.chr10 80750222 143 + 95678458 aaaac-tgctaat---------ttctcatcttcaacagaaggaagccaaagaatagtgccaaaatttggacacatcaggaaacagcagaataagcatattatttat---catggcagtgagcagcagaagaaataAAATGGTCTTTCCCAGGAGTG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81176814 143 - 96509753 aaaaC-Tgctaat---------ttctcatcttcaacagaaggaagccaaagaatagtgccaaaatttggacacatcaggaaacagcagaataagcatattatttat---catggcagtgagcagcagaagaaataAAATGGTCTTTCCCAGGAGTG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76432965 143 + 90941950 aaaac-tgttaat---------ttCTCATCTTCAACAGAAGGAAGCCAAAGAATAGTGCCAAAATTTGGACACATCAGGAAACAGCAGAATAAGCATATTTTTTAT---CATGGCAGTGAgcagcagaagaaataaaatggtcTTTCCCAGGAGGG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18702151 143 + 33263144 aaaaC-Tgctaat---------ttctcatcttcaacagaaggaagccaaagaatagtgccaaaatttggacacatcaggaaacagcagaataagcatattatttat---catggcagtgagcagcagaagaaataAAATGGTCTTTCCCAGGAGTG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198405562 143 + 210400635 catac-cgctgat---------ttatcatcttcaacagtaggaagtcaaagaatagtgccaaaagtcggacaaatcaagaaacagcagaataagcatattatttag---cacagcagtgagcagcagaagaaataAAATGGTCCTTCCCAGGAGCG i calJac3.chr1 C 0 C 0 s mm10.chr15 77225220 128 + 104043685 AAGGTATGCTTATAAAATGTAATTCCTATCTTCAGCAGCAGAAAGCCAGAGGATATGTACAA----TGAATAAAT-AGGAAACAGCAGAATGCAAATTCTACAGAT--CCATGATGGT-AGCAACAGAAAACCCAA-------------------- i mm10.chr15 C 0 C 0 s canFam3.chr10 41016184 140 - 69331447 aaaac-tgttaat---------atctcatttccaacagtaggaagccaaaacatggtgtctaaaattgg-taaatcaagaaatagcagaataagcatgttatttaggcacatggcagacagcagcaga-----tgaaacggTCTTTTGCAGAAGGA i canFam3.chr10 I 224 C 0 a score=449784.000000 s hg38.chr22_KI270876v1_alt 251992 149 + 263666 AAAAGAT---TTTTAACTGTTTGAAGAATGAAATGATCT-AAAATG--TAATAGTA------AAGCTGATTACATGGATTGAGAAAAGTGCTACA-AGAACACT--AGACACTAC--AGCATATACCAGACCTTCATCCACTAGAGGGTG-TAAGGAC----AACACCACA s panTro4.chr22 34632209 149 + 49737984 AAAAGAT---TTTTAACTGTTTGAAGAATGAAATGATCT-AAAATG--TAATAGTA------AAGCTGATTACATGGATTGAGAAAAGTGCTACA-AGAACACT--AGACACTAC--ATCACATACCAGACCTTCATCCACTAGAGGGTG-TAATGAC----AACACCACA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31052250 153 + 46535552 AAAAGATAAATTTTAACTGTTTGAAGAATGAAATGATCT-AAAATG-TTAATAGTA------AAGCTGATTACATGGATTGAGAAAAGTGCTACA-AGAACGCT--AGACACTAC--AGCATATACCAGATCTTCATCCACTAGAGGGTG-TAAGGAC----AACACCACA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100609185 152 - 115148730 AAAAGAT---TTTTAACT-TTTGATGAATAAAAAAATAT-TATATATTTAATAGTA-----GGGGGGGAAAAAAAGAATTGAGAAAAGTGTTACCTCCCCCACT--GGACACTAC--AGCATATACCAGACCTTCATCCACTAGAGGGTG-TAAGGAC----ACCACCACA i nomLeu3.chr7b I 163 C 0 s rheMac3.chr10 80750365 151 + 95678458 AAAAGAT---TTGTAACTGTTCGAAGAATGAAATGATGT-AAAATG--TAATAGTA------AAGCTGATTACATGGATTGAGAAAAGTGCTACA-AGAACGCTGTAGACACTAC--AGCATACACCAGACCTTCATCCACTAGAGGGTG-CAAGGAC----AACACCACA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81176957 151 - 96509753 AAAAGAT---TTGTAACTGTTCGAAGAATGAAATGATGT-AAAATG--TAATAGTA------AAGCTGATTACATGGATTGAGAAAAGTGCTACA-AGAACGCTGTAGACACTAC--AGCATACACCAGACCTTCATCCACTAGAGGGTG-CAAGGAC----AACACCACA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76433108 151 + 90941950 AAAAGAT---TTGTAACTGTTCGAAGAATGAAATGATGT-AAAATG--TAATAGTA------AAGCTGATTACATGGATTGAGAAAAGTGCTACA-AGAACGCTGTAGACACTAC--AGCATACACCAGACCTTCATCCACTAGAGGGTG-CAAGGAC----AACACCACA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18702294 151 + 33263144 AAAAGAT---TTGTAACTGTTCGAAGAATGAAATGATGT-AAAATG--TAATAGTA------AAGCTGATTACATGGATTGAGAAAAGTGCTACA-AGAACGCTGCAGACACTAT--AGCATACACCAGACCTTCATCCACTAGAGGGTG-CAAGGAC----AACACCACA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198405705 157 + 210400635 AAAAGAT---TTTGAACAGTCTGCAAAATGAAATGATCTAAAAATG--CAATAGTA------AAGCTGATTACATGGATCAAGAAAAGTGCTACA-AGAATGCT--AGACACTATAGAGCATATACCAGACCTTCATCCACTAGAGGGTGTTAAGGACAACAAACACCACA i calJac3.chr1 C 0 C 0 s mm10.chr15 77225348 122 + 104043685 ---------CTTGTGAACACCTGAAGACAGAGA-GACCT-AGGGGC--AAAAGCCA------AGGCAGAGCAACTAACTT----------------AG----CT--GAAAACTGC--TGCATGTACC-TCCCTTGCTCCACTAGAGGGTG-CAAGGAT----GCCACCACA i mm10.chr15 C 0 I 3054 s canFam3.chr10 41016324 151 - 69331447 AAAAGCT---TATGAACGATTTGTAGAAGGAAATGGTCT-AAAATG--CAAGAGTAGGTCTGAAGCTAATTACATGGTTTGAGCAAAATGCT----AGAATACC--AGATGCCAC--AGCATTTACCAACCCTTCATCCACTAGAGGGTG-TAAAG-C----AACATCACA i canFam3.chr10 C 0 C 0 a score=899729.000000 s hg38.chr22_KI270876v1_alt 252141 282 + 263666 GAAGGACCTAAACTATTGATGGGTGACCTGAGGTCAGATGTTGGACAGAAGCAACAGTTT--GAAAAAGCTTTGCACAAAGGCTGAAAGTGGGGTTCTAGACAACCTAACAGGGG---GGAA---AAAAAGCAATTTCACACTTCCTGTAATTTAAGAGCAAAGCAAAAGCATGTTTAGTTaaaaaaaaaaaaaaaa---------aGAGGATCAGAAAGAAAATTATTATAGATTGCGAGATACAGAAGGGGT----AACGTTTTACTTCTGAACC----ATTTTAATTCAGTCTCCAGCTGGGGG s panTro4.chr22 34632358 281 + 49737984 GAAGGACCTAAACTATTGATGGGTGACCTGGGGTCAGATGTTGGACAGAAGCAACAGTTT--GAAAAAGCTTTGCACAAAGGCTGAAAGTGGGGTTCTAGACAACCTAACAGGGG---GGAA--GAAAAAGCAATTTCACACTTCCTGTAATTTAAGAGCAAAGCAAAAGCATGTTTAGTT--AAAAAAAAAAAAAA---------AGAGGATCAGAAAGAAAATTATTATAGATTGTGAGATACAGAAGGGGT----AACATTTTACTTCTGAACC----ATTTTAATTCAGTCTCCAGCTGGGGG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31052403 294 + 46535552 GAAGGACCTAAACGACTGATGGGTGACCTGAGGTCAGATGTCGGACAGAAGCAACAGTTT--GAAAAAGCTTTGCACAAAGGCTGAAAGTGGGGTTCTAGACAACCTAACAGGGG---AAAAAAAAAAAAGCAATTTCACATTTCCTGTAATTTAAGAGCAAAGCAAAAGCATGTTTAGTTaaaaaaaaaaaaaaaaaaaaaaaaCAGAGGAACAGAAAGAAAATTATTACAGATTGCGAGATACAGAAGGGGT----AACATTTTACTTCTGAACC----ATTTTAATTCAGTCTCCAGCTGGGGG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100609337 276 - 115148730 GAAGGACCTAAACTATTGATGGGTGACCTGAGGTCAGATGTTGGACAGAAGCAACAGTTT--GAAAAAGCTTTGCACAAAGGCTGAAAGTGGGGTTCTAGACAATCTAACAGGGG---GAAA----AAAAACAATTTCACACTTCCTGTAATTTAAGAGCAAAGCAAAAGCATGTTTAGT-----AAAAAAAAAAAA---------AGAGGATCAGAAAGAAAATTATTATAGATTGCTAGATACAGAAGGGGT----AACATTTTACATCTGAACC----ATTTTAATTCAGTCTCCAGCTGGGGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80750516 277 + 95678458 GAAGGACCTAAACTATTGATGAGTGACCTGAGGTCAGATGTTGGACAGAAGCAACAGTTT--GAAAAAGCTTTGCACAAAGGCTGAAAGTGGGGTTCTAGACAACCTAATAGGGGAAAAAAA--AAAAAAGCAATTTCACACTTCCTGTAATTTAAGAGCAAAGCACAAGCATGTTCAATT---------AAATAAA---------AGAGGATCAGAAAGAAACTTATTATAGACTGTGAGATACAGAAGGGGT----AACATTTTACTTCTGAACC----GTTTTAATCCAGTCTCCAGCTGGGAG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81177108 275 - 96509753 GAAGGACCTAAACTATTGATGAGTGACCTGAGGTCAGATGTTGGACAGAAGCAACAGTTT--GAAAAAGCTTTGCACAAAGGCTGAAAGTGGGGTTCTAGACAACCTAATAGGGG--AAAAA--AAAAAAGCAATTTCACACTTCCTGTAATTTAAGAGCAAAGCACAAGCATGTTCAATT---------AAATAAA---------AGAGGATCAGAAAGAAACTTATTATAGACTGTGAGATACAGAAGGGGT----AACATTTTACTTCTGAACC----ATTTTAATCCAGTCTCCAGCTGGGAG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76433259 276 + 90941950 GAAGGACCTAAACTATTGATGAGTGACCTGAGGTCAGATGTTGGACAGAAGCAACAGTTT--GAAAAAGCTTTGCACAAAGGCTGAAAGTGGGGTTCTAGACAACctaatagggg-gaaaaa--aaaaaagcaatttcacaCTTCCTGTAATTTAAGAGCAAAGCACAAGCATGTTCAATT---------AAATAAA---------AGAGGATCAGAAAGAAACTTATTATAGACTGTGAGATACAGAAGGGGT----AACATTTTACTTCTGAACC----ATTTTAATCCAGTCTCCAGCTGGGAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18702445 274 + 33263144 GAAGGACCTAAACTATTGATGAGTGACCTGAGGTCAGATGTTGGACAGAAGCAACAGTTT--GAAAAAGCTTTGCACAAAGGCTGAAAGTGGGGTTCTAGACAACCTAATGGGGG---GGAA--AATAAAGCAATTTCACACTTCCTGTAATTTAAGAGCAAAGCACAAGCATGTTCAATT---------AAATAAA---------AGAGGATCAGAAAGAAACTTATTATAGACTGTGAGATACAGAAGGGGT----AACATTTTACTTCTGAACC----ATTTTAATCCAGTCTCCAGCTGGGAG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198405862 277 + 210400635 GAAGGACCTAAATTACTGACAGGTGACTTGAGGCCAGATGTTGGAGAGAAGCAACCGTTT--GAAAAAGCTTTGCACAAAGGCTAAAAGTGGGGTTCTAGACAACCTAATAGTAA---GAAA----AGAAGCAATTTCCCACCTCCTGTAATTTAACAGCAAAGCAAAAGCATGTTTGGTT-------AAGAAAAAA---------AGAGGATCAGGAAGAAATGTATTATAGATTGT-AGATACAGAAGCAGT----AACATTTAACTTCTGAACCAGTTATTTTAATCCAGTCTCCAGCTGGGGG i calJac3.chr1 C 0 C 0 s canFam3.chr10 41016475 267 - 69331447 -GAGGACCT-ACCCACTGATGGGTGACCTGATGTCAGATATTGGGGAGAAGCAACCATTTTATAATATACCTTGCATGAAAGCTGAGAGTAGGGTTCTGTACAACCTAGCAAAAA---GAAA----AAAAGCAATTTTGTA-----TGTAATTTAAAAGCAAAGCAGAAGTATTTTTAGTT------------AAAA---------GGGGGCCAAGTAAGAAAATTATTATAGACTATGAGAAACAGGACAGGTATGAAACACTTTACTTCT-AGTC----TTTTTAATCCAGTTTCCAGCTTGGGG i canFam3.chr10 C 0 I 920 e mm10.chr15 77225470 3054 + 104043685 I a score=1108151.000000 s hg38.chr22_KI270876v1_alt 252423 370 + 263666 GCCTTAGAGCTTGGGTGGAGAGATGGAAAGTAGGGGAGTGACTGCTAAAAGGTATGGGGTTTCTTGTGTcccggcatggaagcttacggctgtaatcccagcactttgggaggttgaggcgggtggaacgcatgaactcaggagttcaagaccaacctgggcaacatggtgaaaccccatctctaccaaaaatacaaaaactagctgggcatggaggtgcacacctgcggtcccagctactcaggaggctgaggtaggaggaccacttgagcctgggaggtggaggttgcaatgagcagagatcatgccactgcactccagcctaggtgacaaagtgagactccatctcaaaaaaataaaGGCATGAGGT s panTro4.chr22 34632639 370 + 49737984 GCCTTAGAGCTTGGGTGGAGAGATGGAAAGTAGGGGAGTGACTGCTAAAAGGTATGGGGTTTCTTGTGTCCCAGCTTGGAAgcttacggctgtaatcccagcactttgggaggttgaggcgggtggaacgcatgaactcaggagttcaagaccaacctgggcaacatggtgaaaccccatctctaccaaaaatacaaaaactagctgggcatggaggtgcacacctgcggtcccagctactcaggaggctgaggtaggaggaccacttgagcctgggaggcggaggttgcaatgagcagagatcatgccactgcactccagcctaggtgacaaagtgagactccatctcaaaaaaataaaGGTATGAGAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31052697 368 + 46535552 GCCTTAGAGCTTGGGTGGAGAGATGGAAAGTAGGGAAGTGACTGCTAAAA-GTATGGGGTTTCTTGTGCccaggcacggaagcttacggctgtaatcccagcactttgggaggttgaggcgggtggtgcgcatgaactcaggagttcaggaccaacctgggcaacatggtgaaaccccatctctaccaaaaatac-aaaattagctgggcatggaggtgcacacctgcggtcccagctagtcaggaggctgaggtaggaggatcacttgagcctgggaggcggaggttgcaatgagcggagatcacgccacagcactccagcctaggtgacaaagtgagactccatctcaaaaaaataaaGGTATGAGGT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100609613 370 - 115148730 GCCTTAGAGCTTGGGTGGAGAGATGGAAAGTAGGGGAGTGACTGCTAAAAGGTATGGGGTTTCTTGTGTccgggcatggaagcttacggctgtaatcccagcactttgggaggttgaggcgggtggagtgcataaactcaggagttcaagaccaacctgggcaacatggtgaaaccccatctctaccaaaaatacaaaaactagctgggcatggaggtgcacacctgtggtctcagctactcagaaggctgaggtaggaggatcacatgagcctgggaggcggaagttgcaacgagcagagatcacgccactgcactgcagcctaggtgacaaagtgagactccatctcaaaaaaataaaGGTATGAGGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80750793 367 + 95678458 GTCTTACAGTTTGGGTGGAAAGATGGCAAGTAGGGGAGTGACTGCTAAAAAGTATGGGGTTTCTTGTGTccgggcgcagaagcttatgactgtaatcccagcactttgggag---gaggcaggtggagcgcatgaactcaggagttcaagaccaacctgggcaacatggtgaaaccccatctctaccaaaaatacaaagattagctgggcatggaggcgtacatctgcagtcccagctactcaggaggctgagatgggaagatcacttgagcctgggaggcggaggctgcaatgagcagagatcatgccattgcactctagcctaggtgacaaagtgagactccatctcaaaaaaataaaGGTATGGGGT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81177383 367 - 96509753 GTCTTACAGTTTGGGTGGAAAGATGGCAAGTAGGGGAGTGACTGCTAAAAAGTATGGGGTTTCTTGTGTccgggcgcagaagcttatgactgtaatcccagcactttgggag---gaggcaggtggagcgcatgaactcaggagttcaagaccaacctgggcaacatggtgaaaccccatctctaccaaaaatacaaaaattagctgggcatggaggcgtacatctgcagtcccagctactcaggaggctgagatgggaagatcacttgagcctgggaggcggaggctgcaatgagcagagatcatgccattgcactctagcctaggtgacaaagtgagactccatctcaaaaaaataaaGGTATGGGGT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76433535 367 + 90941950 GTCTTACAGTTTGGGTGGAAAGATGGCAAGTAGGGGAGTGACTGCTAAAAAGTATGGGGTTTCTTGTGTCCGGGCGCAGAagcttatgactgtaatcccagcactttgggag---gaggcaggtggagcgcatgaactcaggagttcaagaccaacctgggcaacatggtgaaaccccatctctaccaaaaatacaaaaattagctgggcatggaggcgtacatctgcagtcccagctactcaggaggctgagatgggaagatcacttgagcctgggaggcggaggctgcaatgagcagagatcatgccattgcactctagcctaggtgacaaagtgagactccatctcaaaaaaataaaggtatGGGGT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18702719 367 + 33263144 GTCTTACAGTTTGGGTGGAAAGACGGCAAGTAGGGGAGTGACTGCTAAAAAGTATGGGGTTTCTTGTGTccgggcgcagaagcttatgactgtaatcccagcactttgggag---gaggcaggtggagcgcatgaactcaggagttcaagaccaacctgggcaacatggtgaaaccccatctctaccaaaaatacaaaaattagctgggcatggaggcgtacacctgcagtcccagctactcaggaggctgagatgggaagatcacttgagcctgggaggtggaggctgcaatgagcagagatcacgccattgcactctagcctaggtgacaaagtgagactccatctcaaaaaaataaaGGTATGGGGT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198406139 369 + 210400635 GCCTTAGACCTTGGGTGGAGAGATGGAAAGTAGGGGAGTGACTGCTAAAAGGTATGGGGTTTCTTGTGTccaggcacagaggcttacacctgtaatcccatcactttgggaggttggtgtgtgtggatcgcctgaactcagcagttcaagaccaatctgggcaacatggtgaaagcccatctctacaaaaaatacaaaaattagctggacatggaggtgcacacctgtggtcccagctactcaggaggctgaggtgagaggatcgcttgagcctgggagacgaaggttgcaatgagcagagattgcgccactgcaccccagcctaggtgacaaagtgagattctgtctc-aaaaaataaaGGCATGGGGT i calJac3.chr1 C 0 C 0 e mm10.chr15 77225470 3054 + 104043685 I e canFam3.chr10 41016742 920 - 69331447 I a score=1966036.000000 s hg38.chr22_KI270876v1_alt 252793 606 + 263666 TTCTTTAAGGTTGCATTTTTAAGGAATGTAAGTATTAGAAcaatgtttttcaaacaggttgcaatccattagtgggtccaggaaaaatccagcagaaatcaattttggtcaatcgttagtcacaatcgacaattttttgaa--------------ggggacagaaaatatcacagtacttagaacatggttaagataggcagcat----ttggtaagactaattctaagttatagtca-----------------acatatatgtatgtgtgtatactgggtcatgacataaaaGCAACTGCCTCCTTGGGGT--CAGTCTTTTTTTAAGCTCAAAAGCACTAAGCTAGAACCTGAACACACTTACCATGTCCTCCATTCCACCAACTATCCCCGAGGGAAGAAAAGTAG---------TCATCATTTCTTCAAT--CAAGCCAAATGAGCACTACAGAAGATATATTTGCTGTTGTCCACAGCTCCCAATAAAAA-----AAAAG-CCTTGAAAGTTCA-TTGCAAAAA-TTTGACTAAAATAAAGTTCATTTTCTACCCATGA--------AAAAACTGGTTAGAAAAAAG--AAAAAAAAAATCT-----------TGAGGAAAGAAAATACTTGTTAAGAAAAGAAACCCTTAGGTCATTTTAAAT-TTACCCTCT-TATT-- s panTro4.chr22 34633009 609 + 49737984 TTCTTTAAGGTTGCATTTTTAAGGACTGTAAGTATTAGAAcaatgtttttcaaacaggttgcaatccattagtgggtccaggaaaaatccagcagaaatcaattttggtcaatcgttagtcacaatcgacaattttttgaa--------------gaggacagaaaatatcacagtacttagaacatggttaagataggcagcat----ttggtaagactaattctaagttatagtca-----------------acatatatgtatgtgtgtatactaggtcatgacataaaaGCAACTGCCTCCTTGGGGT--CAGTCTTTTTTTAAGCTCAAAAGCACTAAGCTAGAACCTGAACACACTTACCATGTCCTCCATTCCACCAACTATCCCCGAGGGAAGAAAAGTAG---------TCATCATTTCTTCAAC--CAAGCCAAATGAGCACTACAGAAGATGTATTTGCTGTTGTCCACGGCTCCCAGTAAAAA-----AAAAG-CCTTGAAAGTTCA-TTGCAAAAA-TTTGACTAAAATAAAGTTCATTTTCTACCCATGA--------AAAAACTGGTTAGAAAAAAGAAAAAAAAAAAATCT-----------TGAGGAAAGAAAATACTTGTTAAGAAAAGAAACCCTTAGGTCATTTTAAAT-TTACCCTCTGTATT-- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31053065 608 + 46535552 TTCTTTAAGGTTGCATTTTTAAGGACTGTAAGTATTAGAATaatgtttttcaaacagattgcaatccattagtgggtccaggaaaaatccagcagaaatcaattttggtcaatcgttagtcacaatcaacaattttttgaa--------------ggggacagaaaatatcacagcacttagaacatggttaagataggcagcac----ttggtaaaactaattctaagttatagtca-----------------acatatacgtctgtgtgtataccgggtcatgacataaaaGCAACTGCCTCCTTGGGGTCACAGTCTTTTTTTAAGCTCAAAAGCACTAAGCTAGAACCTGAACACCCTTACCATGTCCTCCATTCCACCAACTATCCCCGAGGGAAGAAAAGTAG---------TCATCATTTCTTCAAC--CAAGCCAAATGAGCACTACAGAAGATGCATTTGCTGTTGTCCACAGCTCCCAATAAAAA-----AAAAG-CCTTGAAAGTTCA-TTGCAAAAA-TTTGACTAAAATAAAGTTCATTTTCTACCCATGA--------AAAAACTGGTTAGAAAAAAA--GAAAAAAAAATCT-----------TGAGGAAAGAAAATACTT-TTAAAGAAAAAACCCCTTAGGTCATTTTAAAT-TTACCCTCTATATT-- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100609983 609 - 115148730 TTCTTTAAGGTTGCATTTTTAAGGACTGTAAGTATTAGAATaatgtttttcaaacaggttgcaatccattagtgggtccaggaaaaatccagcagaaatcaattttggtcaatcgttagtcacaatcgacaattttttgaa--------------ggggacagaaaatatcacagtacttagaacatggttaagataggcagcat----ttggtaagactaattctaagttatagtca-----------------acatatatgtatgtgtgtatactgggtcatgacataaaaGCAACTGCCTCCTTGGGGTCACAGTCTTTTTTTAAGCTCAAAAGCACTAAGCTAGAACCTGAACACTCTTACCATGTCCTCCATTCCACCAACTATCCCGGAGGGAAGAAAAGTAG---------TCATCATTTCTTCAAC--CAAGCCAAATGAGCACTACAGAAGATGCATTTGCTGTTGTCCACGGCTCCCAATAAAAA-----AAAAACCCTTGAAAGTTCA-TTGCAAAAA-TTTGACTAAAATAAAGTTCATTTTCTACCCATGA--------AAAAACTGGTTAGAAAAAAG---AAAAAAAAATCT-----------TGAGGAAAGAAAATACTTGTTAAGAAAAAAAACCCTTAGGTCATTTTAAAT-TTACCCTCTATATT-- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80751160 603 + 95678458 TTCTTTAAGGTTGCATTTTTAAGGACACTAAGTATTAGAATaatgtttttcaaacaggttgcaatccattagtgggtcCAGGAAAAATTCAGCAGACATCAGTTTTGGTCAATTGTTGGTCACAATCGACAGTTTCTTGAA--------------GGGGACAGAAAATATCACAGTACTTAGAACATGGTTAAGATAGGCAGTAT----TTGATAAGACTAATTCTAATTTATAGTCA-----------------ACACATACGTTTGTGTGTATACTGGGGCATGACATAAAAGCAACTGCCTCCTTGGGGT--CAGTCTTTTTTTAAGCTCAAAAGCACTAAGCTAGAACCTGAACACCCTTACCATGTCCTCCATTCCACAAACTATCCCTGAGGGAAGAAAAGTCA---------TTATCATTTCTTCAAC--CAAGTCAAATGAGTACTACAGAAGATGCATTTGCTATTGTCCACGGCTCCCAATTTTAA-----AAAAG-CCTTGAGAGTTCA--TGCAAAAA-TCTGACTAAAATAAAGTTCATTTTCTACCCATGA--------AAAAACTGGTTAGAAAAAAG----AAAAAAAATTT-----------TGAGGAAAGAAAAGACTTTTTAAGAAAA-AAACCCTTAGGTCATTTTAAAT-TTACCCTCTATATT-- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81177750 603 - 96509753 TTCTTTAAGGTTGCATTTTTAAGGACACTAAGTATTAGAATaatgtttttcaaacaggttgcaatccattagtgggtcCAGGAAAAATTCAGCAGACATCAGTTTTGGTCAATCGTTGGTCACAATCGACAGTTTCTTGAA--------------GGGGACAGAAAATATCACAGTACTTAGAACATGGTTAAGATAGGCAGTAT----TTGATAAGACTAATTCTAATTTATAGTCA-----------------ACACATACGTTTGTGTGTATACTGGGGCATGACATAAAAGCAACTGCCTCCTTGGGGT--CAGTCTTTTTTTAAGCTCAAAAGCACTAAGCTAGAACCTGAACACCCTTACCATGTCCTCCATTCCACTAACTATCCCTGAGGGAAGAAAAGTCA---------TTATCATTTCTTCAAC--CAAGTCAAATGAGTACTACAGAAGATGCATTTGCTATTGTCCACGGCTCCCAATTTTAA-----AAAAG-CCTTGAGAGTTCA--TGCAAAAA-TCTGACTAAAATAAAGTTCATTTTCTACCCATGA--------AAAAACTGGTTAGAAAAAAG----AAAAAAAATTT-----------TGAGGAAAGAAAAGACTTTTTAAGAAAA-AAACCCTTAGGTCATTTTAAAT-TTACCCTCTATATT-- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76433902 606 + 90941950 TTCTTTAAGGTTGCATTTTTAAGGACACTAAGTATTAGAATAATGTTTTTCAAACAGGTTGCAATCCATTAGTGGGTCCAGGAAAAATTCAGCAGACATCAGTTTTGGTCAATCGTTGGTCACAATCGACAGTTTCTTGAA--------------GGGGACCGAAAATATCACAGTACTTAGAACATGGTTAAGATAGGCAGTAT----TTGATAAGACTAATTCTAAGTTATAGTCA-----------------ACACATACGTTTGTGTGTATACTGGGGCATGACATAAAAGCAACTGCCTCCTTGGGGTCACAGTCtttttttAAGCTCAAAAGCACTAAGCTAGAACCTGAACACCCTTACCATGTCCTCCATTCCACTAATTATCCCTGAGGGAAGAAAAGTCA---------TTATCATTTCTTCAAC--CAAGTCAAATGAGTACTACAGAAGATGCATTTGCTATTGTCCATGGCTCCCAATTTTAA-----AAAAG-CCTTGAGAGTTCA-TTGCaaaaa-tctgactaaaataaagttcattttctacccatga--------aaaaactggttagaaaaaag----aaaaaaaaatt-----------tgaggaaagaaaagactttttaaggaaa-aaaccCTTAGGTCATTTTAAAT-TTACCCTCTATATT-- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18703086 606 + 33263144 TTCTTTAAGGTTGCATTTTTAAGGACACTAAGTATTAGAATAATGTTTTTCAAACAGGTTGCAATCCATTTGTGGGTCCAGGAAAAATTCAGCAGACATCAGTTTTGGTCAATCGTTGGTCACAATCAACAGTTTCTTGAA--------------GGGGACAGAAAATATCACAGTACTTAGAACATGGTTAAGATAGGCAGTAT----TTGATAAGACTAATGCCAAGTTATAGTCA-----------------ACACATATGTTTGTGTGTATACTGGGGCATGACATAAAAGCAACTGCCTCCTTGGGGTCACAGTCTTTTTTTAAGCTCAAAAGCACTAAGCTAGAACCTGAACACCCTTACCATGTCCTCCATTCCACTAACTATCCCTGAGGGAAGAAAAGTCA---------TTATCATTTCTTCAAC--CAAGTCAAATGAGTACTACAGAAGATACATTTGCTATTGTCCACGGCTCCCAATTTTAA-----AAAAG-CCTTGAGAGTTCA-TTGCAAAAA-TCTGACTAAAATAAAGTTCATTTTCTACCCATGA--------AAAAACTGGTTAGAAAAAAG----AAAAAAATTTT-----------TGAGGAAAGAAAAGACTTTTTAAGAAAA-AAACCCTTAGGTCATTTTAAAT-TTACCCTCTATATT-- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198406508 635 + 210400635 TTCTTTAAGGTTGCATTTTTAAGGACAGTAAGTATTAGAATaatgtttttcaaacaggttgcaatccaataatgggtccaggaaaaatccagcagagatcaattttggtcaatcattggtcacaatcgataattttttgaatggagacagaaaatggagacagaatataccccagtacttagaacacagtaaagataagcagcat----ttggccagactcattctaagttatagtca-----------------acatacacatacgtgtgtgtactgggtcatgacataaaagctactccttccttaggatcacagtcTTTTTTTAAGCTCAAAAGCACTAAGCAAGAATCTGAACACCCTTACCATATCCTCTATTCCACC-ACTATCCCCAAAGGAAGAAAAGTAGAAAAAGAAATGATGATTTCTTCAGC--CAAGCCAAATGAGTACTACAGAAGATGCATTTGCTGTTATCCACAGTTCCCAATAAAAATAACTAAAAG-CCTTGAAAGTTCA-TTGTAAAAA-TTTGACTAAAATAAAGTTCATTTTCTACCCATAAAT------AAAAACTGGTTAGAAAAAAG----AAAAAAATTCT-----------TGAGGAAGGAAAATACTTTTTAAGAAAA-AAACCCTTAGGTCATTTAAAAT-TTATCCTCTATATT-- i calJac3.chr1 C 0 C 0 s canFam3.chr10 41017662 596 - 69331447 TTCTTGAAGGTTGCATGCTTAAGGACAACAATTATTAGAATTTTG--------ACAGACCCCAAACTATTAGTGGGTCCAGAAA-------------ATCAATTTTGCTCAAT----------------CAACTTGTTGAA-------------------TGGAAAATAT-ACAGTTATTACAACA--GTAAGGGTATGTACTGTACTCTCTGGAAGACTAATTCTAAGTTATATTCgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtCCTGGGTCATGATGTAAAAGGTATTGCTTACTAGGGTTTGTTATCTTTTTTTAAGCTTAAAAGCACTGAGCTAGAACTTGAAGACTCTTACCAGGTCCTCCATTCTA---ACTCTCCCCAAGGGAGGAAAAGTAG---------CTATTATTTCTTTGGCATCAAACCAAATGAGTATGACAGAAAATGCATTTGCTATTGTCCATGGCCCCCAATCAAAAAGACTAAAAG-CCCTGAAAGTTCATTTATAAAAACTCTGACTAAAATAAAGCCCATT------CCAGGAATAAAAGGAAGAACTAGTTAGAAAAAAA------------TTTTTTTTCGATACTTAACAAAGAAAATACTCTTGAAAAATA-AATCCCTTGGGTCatttttattattattatttttttttt i canFam3.chr10 I 920 I 355 e mm10.chr15 77225470 3054 + 104043685 I a score=652803.000000 s hg38.chr22_KI270876v1_alt 253399 201 + 263666 AAAAGTAAGGCTGCCACTCTGAATTTAAATCTATAATTGTCTATGTTATATTTGTCAACTTAAGCATCTCCTTTGA-------TGTTCCCACTTGTTTCTGCTAATCAATGGG--------ACATTGTGTCTTTCAACAGAATTTTAGAAAATTGAAGAAAAAAATATAGTTTTGAGAAGTCATTGACAAGCATTTTAAACATCAAAGAATGggcc s panTro4.chr22 34633618 201 + 49737984 AAAAGTAAGGCTGCCACTCTGAATTTAAATCTATAATTGTCTATGTTATATTTGTCAACTTAAGCATCCCCTTTGA-------TGTTCCCACTTGTTTCTGCTAATCAATGGG--------ACATTGTGTCTTTCAACAGAATTTTAGAAAATTGAAGAAAAAAATATAGTTTTGAGAAGTCATTGACAAGCATTTTAAACATCAAAGAATGggcc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31053673 201 + 46535552 AAAAGTAAGGCTGCCACTCTGAATTTAAACCTATAATTGTCTATGTTATATTTGTCAACTTAAGCATCTCCTTTGA-------TGTTCCCACTTGTTTCTGCTAATCAATGGG--------ACATTGTGTCTTTCAACAGAATTTTAGAAAATTGAAGAAAAAAATATAGTTTTGAGAAGTCATTGACAAGCATTTTAAACATCAAAGAATGggcc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100610592 196 - 115148730 AAAAGTAAGGCTGCCACTCTGAATTTAAATCTATAATTGTC-----TATATTTGTCAACTTAAGCATCTCCTTTGA-------TGTTCCCACTTGTTTCTGCTAATCAATGGG--------ACATTGTGTCTTTCAACAGAATTTTAGAAAATTGAAGAAAAAAATATAGTTTTGAGAAGTCATTGACAAGCATTTTAAACCTCAAAGAATGggcc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80751763 209 + 95678458 AAAAGTAAGCCTGCCACTCTGAATTTAAATCTTTACTTTTCTATGTTATATTTGTCAACGTAAGCACCTCCTTTGA-------TGTTCCCACTTGTTTCTGCTTATCAGTGGGACATACCCACATTGTGCCTTTCAACAGAATTTTAGAAAATTAAAGAAAAAAATATAGTTTTGAGAAGTCACTGACAAGCATTTCAAACATCAAAGAATGggcc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81178353 209 - 96509753 AAAAGTAAGCCTGCCACTCTGAATTTAAATCTTTACTTATCTATGTTATATTTGTCAACGTAAGCACCTCCTTTGA-------TGTTCCCACTTGTTTCTGCTAATCAGTGGGACATACCCACATTGTGCCTTTCAACAGAATTTTAGAAAATTAAAGAAAAAAATACAGTTTTGAGAAGTCACTGACAAGCATTTCAAACATCAAAGAATGggcc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76434508 209 + 90941950 AAAAGTAAGCCTGCCACTCTGAATTTAAATCTTTACTTATCTATGTTATATTTGTCAACGTAAGCACCTCCTTTGA-------TGTTCCCACTTGTTTCTGCTAATCAGTGGGACATACCCACATTGTGCCTTTCaacagaattttagaaaattaaagaaaaaaatatagcttTGAGAAGTCACTGACAAGCATTTCAAACATCAAAGAATGGGCC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18703692 209 + 33263144 AAAAGTAAGCCTGCCACTCTGAATTTAAATCTTTACTTATCTATGTTATATTTGTCAGCGTAAGCACCTCCTTTGA-------TGTTCCCACTTGTTTCTGCTAACCAGTGGGACATATCCACATTGTACCTTTCAACAGAATTTTAGAAAATTAAAGAAAAAAATATAGTTTTGAGAAGTCACTGACAAGCATTTCAAACATCAAAGAATGggcc i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198407143 203 + 210400635 AAAAGTAAGGCTGCCACTCTGAATGTAAATCTATTATTGTCTTTGTTATATTTGTCAACTTATGCATCTCCTTCGA-------TGTTCCCACTTGTTTCTGCTAATCAATGGAACATGGCCACATTGTGTCTTTCCACAAAATTCTAGAAAATTAAAGAAAAAAATATAATTTTGAGAAGTCACTGACAAGCATTT------TTTAAGAATGggcc i calJac3.chr1 C 0 C 0 s canFam3.chr10 41018613 198 - 69331447 aaAAGTATGGCTGCCACTCCCAATTAAAATCTCTAACAGTCAAAGCCACATCTGCCAACTTGCACGTCACCTTTGACATTCTTTGTTTCCA--TGTTTCATCTGAACAATTCGAT------ACAGTG-GCTTTTCAACAGAATTTTAGGAA----AGGAAAAAAAT-----TTTAAGGAGACACTGACCAACATTTTCAAAATAAGATAAAGAGCC i canFam3.chr10 I 355 C 0 e mm10.chr15 77225470 3054 + 104043685 I a score=802749.000000 s hg38.chr22_KI270876v1_alt 253600 276 + 263666 ccgcgtggtggttcacatctgtaattccagcactttgggaggctgaggtgagcagatcacctgaggtcagaagtttgagatcagcctggccaacatggcaaaacactgtctctactaaaaatacaaaaattagccaggcttagtgtcgcatgtctgtaatcccagctactcaggaggctgaggcagaagaatcacttgaacccgggaggcaaatgttgcagtgagccaagattgcgccacttcattccagcctgggcaacagagtctc--------------aaaaaaaT------- s panTro4.chr22 34633819 276 + 49737984 cggcatggtggttcacatttgtaattccagcactttgggaggctgaggtgagcagatcacctgaggtcaggagtttgagatcagcctggccaacatggcaaaacactgtctctactaaaaatacaaaaattagccaggcttagtggcgcacgtctgtaatcccagctactcaggaggctgaggcagaagaatcacttgaacccgggaggcagatgttgcagtgagccgagattgcaccacttcattccagcctgggcgacagagtctc--------------aaaaaaaT------- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31053874 276 + 46535552 cagcatggtggttcacatctgtaattccagcactttgggaggctgaggtgagcggatcacctgaggtcaggagtttgagatcagcctggccaacatggcaaaacgctgtctctactaaaaatacaaaaattagccaggcttggtggcgcatgtctgtaatcccagctactcaggaggctgaggcagaagaatcacttgaacccaggaggtggatgttgcagtgagccgagatcgtgccacttcattccagcctgggtggcagaatctc--------------aaaaaaaT------- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100610788 272 - 115148730 cagcatggtggctcacgtctgtaattccagcactttggaaggctgaggtgaacggatcacctgaggtcaggagtttgagatcagcctggccaacatggcaaaacgctgtctctactaaaaatacaaaaattagccaggcttggtggcacacgtctgtaatcccagctactgaggaggctgaggcagaagaatcacttgaacccgggaggcaga---tgcagtgagccaagatcgcgccacttcattccagcctgggcgac-gagtctc--------------aaaaaaaT------- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80751972 283 + 95678458 cagcgtggtggttcacatctgtaattctagcactttgggaggctgaggtgagcagatcacctgaggtcaggagtttgagatcaacctggccaacatggcaaaacgctgcctctactaaaaagagaaaagttagccaggcttggtggcgcatgtctgtaatcccagctactcaggaagctgaggcagaagaatcacttgaacccgggaggcggatgttgcagtgagccgtgattgcgccaattcattccagactgggcgat--agtttc-----aaaaaaaaaaaaaaaaT------- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81178562 285 - 96509753 cagcgtggtggttcacatctgtaattctagcactttgggaggctgaggtgagcagatcacctgaggtcaggagtttgagatcaacctggccaacatggcaaaacgctgcctctactaaaaatagaaaagttagccaggcttggtggcgcatgtctgtaatcccagctactcaggaagctgaggcagaaggatcacttgaacccgggaggcggatgttgcagtgagccgtgattgcgccacttcattccagactgggcgat--agtttc---aaaaaaaaaaaaaaaaaaT------- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76434717 282 + 90941950 cagcgtggtggttcacatctgtaattctagcactttgggaggctgaggtgagcagatcacctgaggtcaggagtttgagatcaacctggccaacatggcaaaacgctgcctctactaaaaatagaaaagttagccaggcttggtggcgcatgtctgtaatcccagctactcaggaagctgaggcagaagaatcacttgaacccgggaggcggatgttgcagtgagccgtgattgcgccacttcattccagactgggcgat--aatttc------aaaaaaaaaaaaaaat------- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18703901 288 + 33263144 cagcgtggtggttcacatctgtaattctagcactttgggaggctgaggtgagcagatcacctgaggtcaggagtttgagatcaacctggccaacatggcaaaacgctgtctctactaaaaatagaaaagttagccaggcttggtggtgcatgtctgtaatcccagctactcaggaggctgaggcagaagaatcacttgaacccgggaggcggatgttgcagtgagccgtgattgcgccacttcattccagactgggcaac--agtttccaaaaaaaaaaaaaaaaaaaaT------- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198407346 292 + 210400635 tggcatggt-gctcacatctgtaattctggcattttgagaggctgaggtgagcggagcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccacctctactaaaaatagaaaaattagctaggcttggtggcacgtgtctgtaatcccagctactcaggaggctgaggcagaagaatcacttgaatcccagagacagatgttgcagtgagccaagatcgtgccactgcactccagcctgggtgac--tgtctc--aaaaaaaaaaaaaaaaaaaTCAAAGAA i calJac3.chr1 C 0 C 0 e mm10.chr15 77225470 3054 + 104043685 I e canFam3.chr10 41018811 0 - 69331447 C a score=1177874.000000 s hg38.chr22_KI270876v1_alt 253876 349 + 263666 TGACAACATGACA-TT--TTTCTTTGTATTTAAAATATGAAAAGATAAAATTTAGATCATAAGTTATTTTAACAAACAAGAT----AGAAAA----CTTGACAGAAATAAGTTACTCAA-GAACTTTCAAGTCATATGAAGACTTCATG--CTCCCACATTCTCCAAAGATTCCAGAATATCTTATCTTGTCACACCAGCAAAAGAACACTTATATTCAGAGA------GACACTGACAGACAAATACAAAAGggaaa-tacaagacatggaggctgaaaat-cggggttcaagtccaattct-ttacttactacctatataactaagactgggagattcatttgacagtctctgtgctttggtattctttt s panTro4.chr22 34634095 345 + 49737984 TGACAACATGACA-TT--TTTCTTTGTATTTAAAATATGAAAAGATAAAATTTAGATCATAAGTTATTTTAACAAACAAGAT----AGAAAA----CTTGACAGAAATAAGTTACTCAA-GAACTTTCAAGTCATATGAAGACTTCATG--CTCCCACATTCTCCAAAGATTCCAGAATATCTTATCTTGTCACACCAGCAAAAGAACACTCATATTCAGAGA------GACACT----GACAAATACAAAAGggaaa-tacaagacatggaggctgaaaat-cggggttcaagtccaattct-ttacttactacctatataactaagactgggagattcatttgacagtctctgtgctttggtattctttt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31054150 349 + 46535552 TGACAACATGACA-TT--TTTCTTTGTATTTAAAATATGAAAAGATAAATTTTAGATCATAAGCTATTTTAACAAACAAGAT----AGAAAA----CTTGACAGAAATAAGTTATTCAA-GGACTTTCAGGTCATATGAAGACTTTATG--CTCCCACATTCTCCAAAGATTCCAGAATATCTTATCTTGTCACACCAGCAAAAGGACATTCATATTCAGAGA------GACACTGACAGACAAATACAAAAGGGAAA-TATAAgacatggaggctgaaaat-cggggttcaagtccaattct-ttacttactacctatataagtaagactgggagattcatttgacagtctctgtgctttggcattctttt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100611060 349 - 115148730 TGACAACATGACA-TT--TTTCTTTGTATTTAAAATATGAAAAGATAAATTTTAGATCATAAGCTATTTTAACAAACAAGAT----AGAAAA----CTTGACAGAAATAAGTTATTCAA-GAACTTTCAGGTCATATGAAGACTTCATG--CTCCCACATTCTCCAAAGATTCCAGAATATCTTATCTTGTCACACCAGCAAAAGAACACTCATATTCAGAGA------GACACTGACAGACAAATATAAAAGggaaa-tacaagacatggaggctgaaaat-cggggtttaagtccaattct-ttacttactacctatataagtaagactaggagattcatttgacagtctctgtgctttggcattctttt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80752255 345 + 95678458 TGACAACATGACA-TT--TTTCTTTGTATTTAAAATAAGAAAAGATAAATTTTAGATCATAAACTATTTTAACAAACAAGAT----AGAAAA----CTTGACAAAAATAAGTTATTCAAGGGACTTTCAGGTCATATGAAGACTTCATG--CTCCCACATTCTCCAAAGATTCCAGAA-----TATCTTGTCACACCAGCAAAAGAACATTCATATTCAGAGA------GACACTGACAGAAAAATACAAAAGggaaa-tacaagacatggaggctgaaaat-cggggttcaagtcccattct-ttacttactacctacgtaaggaagactgggagattcatttgacagtctctgtgctttggtattctttt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81178847 345 - 96509753 TGACAACATGACA-TT--TTTCTTTGTATTTAAAATAAGAAAAGATAAATTTTAGATCATAAACTATTTTAACAAACAAGAT----AGAAAA----CTTGACAAAAATAAGTTATTCAAGGGACTTTCAGGTCATATGAAGACTTCATG--CTCCCACATTCTCCAAAGATTCCAGAA-----TATCTTGTCACACCAGCAAAAGAACATTCATATTCAGAGA------GACActgacagaaaaatacaaaagggaaa-tacaagacatggaggctgaaaat-cggggttcaagtcccattct-ttacttactacctacgtaaggaagactgggagattcatttgacagtctctgtgctttggtattctttt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76434999 345 + 90941950 tgacaacatgaca-tt--tttctttgtatttaaaataagaaaagataaattttagaTCATAAACTATTTTAACAAACAAGAT----agaaaa----cttgacaaaaataagTTATTCAAGGGACTTTCAGGTCATATGAAGACTCCATG--CTCCCACATTCTCCAAAGATTCCAGAA-----TATCTTGTCACACCAGCAAAAGAACATTCATATTCAGAGA------GACActgacagaaaaatacaaaagggaAA-TACAAGACATGGAGGCTGAAAAT-CGGGGTTCAAGTCCCATTCT-TTACTTACTACCTACGTAAGGAAGACTGGGAGATTCATTTGACAGTCTCTGTGCTTTGGTATTCTTTT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18704189 345 + 33263144 TGACAACATGATA-TT--TTTCTTTGTATTTAAAATAAGAAAAGATAAATTTTAGATCATAAACTATTTTAACAAACGAGAT----AGAAAA----CTTGACAGAAATAAGTTATTCAAGGGACTTTCAGGTCATATGAAGACTTCATG--CTCCCACATTCTCCAAAGATTCCAGAA-----TATCTTGTCACACCAGCAAAAGAACATTCATATTCAGAGA------GACActgacagaaaaatacaaaagggaaa-tacaagacatggaggctgaaaat-cggggttcaagtcccattct-ttacttactacctatgtaaggaagactgggagattcatttgacagtctctgtgctttggtattctttt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198407638 349 + 210400635 TGACAACATGACATTT--TTTCTTTTTATTTAAAATACAAACAGATAAATTTTAGATCATAAGCTATTTTAACAAACAAGACAGAAAGAAAA----CTTGACAGAAATAAGTTATTCAAGGGACTTTCAGGTCATATGAAGACTTCATG--CTGCTACATTCACCAAAGATTTCAGAATATCTTATCTTGTCACACCAGCAAAAGAACATTCATATTCAGAGA------GACACTGACAAAAAAATACAAAAGGGAAA-TACAAGACACAGAGGCTgaaaat-caggattcaagtccaattct-tcacttaccacctatgt----aagactgggagattgatttgacaaactctgtgctttggtgt--tttt i calJac3.chr1 C 0 C 0 s canFam3.chr10 41018811 351 - 69331447 TAACACCATGATG-ttaatttttttatatttaaaatataaaaaGATAAACTGTGAACCATAAGCTATTTTAACAAACAAGAG----AGAAAAAAATTTTGACAGACTTAAGTTACTCAAGGGACCTCCAGATCATATGAAGCCTTTTTGTACTGCTACATCC-CCAAGGATTCCATAA-----TATCTTGTCACACTAGCAAGAGAACATCCCCAATCAAGGAAGAGAGAACAATGACAAAAGACCACAAAagagaaattacaagac----aggctgaaaatccagggttcaagcctatttctgccacctcccctctatgt----gacattgggacagtcatttaaaaatctc--tgcattggttttctttt i canFam3.chr10 C 0 I 514 e mm10.chr15 77225470 3054 + 104043685 I a score=313857.000000 s hg38.chr22_KI270876v1_alt 254225 113 + 263666 atctataaaattgggataataaagcccaagccacctagctgaactattgtgaagatcaaaagtggatatacacaggagggttttgtaaactgtaa---agcagttagcagatatta s panTro4.chr22 34634440 113 + 49737984 atctataaaatagggataataaagcccaagccacctagctgaactattgtgaagatcaaaagtggatatacacaggagggttttgtaaactgtaa---agcagttagcagatatta i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31054499 113 + 46535552 atctataaaatagggataataaagcccaagccacctagctgaactattgtgaagaccaaaactggatatacacagaagtgttttgtaaactgtaa---agtacttagcagatattg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100611409 113 - 115148730 atctataaaatagggataataaagcccaacccacctagctgaactattgtgaagatcaaaactggaaatacacaggagtgttttgtaaactgtaa---agtacttagcagatatta i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80752600 113 + 95678458 atctatgaaacacggataataaagcccaatctacctggttgaactactgtgaagatcaaaactggatatacacaggagtgttttgtaaactgtaa---agtactTAGCAGACATTA i rheMac3.chr10 C 0 I 465 s macFas5.chr10 81179192 113 - 96509753 atctatgaaacacggataataaagcccaatctacctggttgaactactgtgaagatcaaaactggatatacacaggagtgttttgtaaactgtaa---agtactTAGCAGACATTA i macFas5.chr10 C 0 I 551 s papAnu2.chr10 76435344 113 + 90941950 ATCTATGAAACACGGATAATAAAGCCCAATCTACCTGGTTGAACTACTGTGAAGATCAAAACTGGATATACACAGGAgtgttttgtaaactgtaa---agtacttagcagacatta i papAnu2.chr10 C 0 I 470 s chlSab2.chr19 18704534 113 + 33263144 atctatgaaacagggataataaagcccaatctacctggttgaactactgtgaagatcaaaactggatatacacaggagtgttttgtaaactgtaa---agtactTAGCAGACATTA i chlSab2.chr19 C 0 I 447 s calJac3.chr1 198407987 109 + 210400635 atcta------agggataataaagcccaacctacctgactgaatcattgtgaagactgaaact-gatatacacaggagtgctttgtaaactgtaaagtagtacttaacagatatca i calJac3.chr1 C 0 C 0 e mm10.chr15 77225470 3054 + 104043685 I e canFam3.chr10 41019162 514 - 69331447 I a score=89295.000000 s hg38.chr22_KI270876v1_alt 254338 105 + 263666 gttgggtttttTGTGTACCACAAATATATACATTTGTATTCATCAATTAATAAACAAAATAGTACACTACAGCTTAAATAATTTTTAATGATGAAATAATGAAAG s panTro4.chr22 34634553 105 + 49737984 gttgggtttttTGTGTACCACAAATATATACATTTGTATTCATCAATTAATAAACAAAATAGTACACCACAGCTTAAATAATTTTTAATGATGAAATAATGAAAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31054612 105 + 46535552 gttgggtttttTGTGTACCACAAATATATACATTTGTATTCATCAATTAATAAACAAAATAGTACACTATAGCTTAAATAATTTTTAATGATGAAATAATGAAAG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100611522 105 - 115148730 gttgggtttttTGTGTATCACAAATATATACATTTGTATTCATCAATTAATAAACAAAATAGTACACTAAAGCTTAAATAATTTTTAATGATGAAATAATGAAAG i nomLeu3.chr7b C 0 C 0 s calJac3.chr1 198408096 104 + 210400635 gttggg-tttttgtGTACCAAAACTATATACATTTTTAttcatcaattaataaacaaaatagaacattatagcttaaataatttttaatgatgaaataatgaaag i calJac3.chr1 C 0 C 0 e mm10.chr15 77225470 3054 + 104043685 I e canFam3.chr10 41019162 514 - 69331447 I e rheMac3.chr10 80752713 465 + 95678458 I e papAnu2.chr10 76435457 470 + 90941950 I e macFas5.chr10 81179305 551 - 96509753 I e chlSab2.chr19 18704647 447 + 33263144 I a score=2552.000000 s hg38.chr22_KI270876v1_alt 254443 1 + 263666 C s panTro4.chr22 34634658 1 + 49737984 C i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31054717 1 + 46535552 C i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100611627 1 - 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80753178 1 + 95678458 C i rheMac3.chr10 I 465 C 0 s macFas5.chr10 81179856 1 - 96509753 C i macFas5.chr10 I 551 C 0 s papAnu2.chr10 76435927 1 + 90941950 C i papAnu2.chr10 I 470 C 0 s chlSab2.chr19 18705094 1 + 33263144 C i chlSab2.chr19 I 447 C 0 s calJac3.chr1 198408200 1 + 210400635 c i calJac3.chr1 C 0 I 860 e mm10.chr15 77225470 3054 + 104043685 I e canFam3.chr10 41019162 514 - 69331447 I a score=1164351.000000 s hg38.chr22_KI270876v1_alt 254444 377 + 263666 TTTCAACACTTAGTTTTGCAAGTAT-CCCACTGCTGAACATCCCTTACTTGGTTAGGCCACCCCAATGAAGCAAAACAAATTATCTCTAGTTTGTGTGTATCTGTTCTAATCCTCTTCCCTACCCATCCCCCAAACCGAGTTGACTCTAAAACAATAGAACAAAATTTAGTCaagtaaccactaaggagatacaaaattgatgaaacaaaagtaagtcttccctgtggttgattAAAGTATAAGCCTCTTTTAATCAATT--AACTTGTTAAATTAACTAATGTTCTCCAGTTCCCAAGTCTAATAAAGGGACGCTTTTAACAGTCTTAAACCACCTAAAActagtaaacaactctctcctatttgcccccaagcccttt s panTro4.chr22 34634659 377 + 49737984 TTTCAACACTTAGTTTTGCAAGTAT-CCCACTGCCGAACATCCCTTACTTGGTTAGGCCACCCCAATGAAGCAAAACAAATTATCTCTAGTTTGTGTGTATCTGTTCTAATCCTCTTCCCTACCCATCCCCCAGACTGAGTTGACTCTAAAACAATAAAACAAAATTTAGTCAAGTAACCACTAAGGAGATACAAAATTTATGAAACAAAAGTAAGTCTTCCCTATGGTTGATTAAAGTATAAGCCTCTTTTAATCAATT--AACTTGTTAAATTAACTAATGTTCTCTAGTTCCCAAGTCTAATAAAGGGACGCTTTTAACAGTCTTAGACCACCTAAAActagtaaacaactctctcctatttgcccccaagcccttt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31054718 376 + 46535552 TTTCAACACTTAGTTTTGCAAGTAT-CCCACTGCTGAACATCCCTTACTTGGTTAGGCCACCCCAATGAAGTAAAACAAATTATCTCTAGTTTGTGTGTATCTGCTCTAATCCTCTTCCCTACCCATCCCCCAAACTGAGTTGACTCTAAAACAATAAAACAAAATTTAGTCAAGTAACCACTAAGGAGATACAAAATTGAT-AAACAAAAGTAAGTCTTCCCTATGGTTGATTAAATTATAAGCCTCTTTTAATCAATT--AACTTGTTAAATTAACTAATGTTCTCCAGTTCCCAAGTCTAATAAAGGGACGCTTTTAACAGTCTTATTCCACCTAAAActagtaaacaactctctcctatttgcccccaagcccatt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100611628 377 - 115148730 TTTCAACACTTAGTTTTGCAAGTAT-CCCACTGCTGAACATCTCTTACTTGGTTAGGCCACCCCAGTGAAACAAAACAAATTATCTCTAGTTTGTGTGTATCTGCTCTAATCCTCTTCCCTACCCATCCCCCAAACTGAGTTGACTCTAAAACAATAAAACAAAATTTAGTCAAGTAACCACTAAGGAGATACAAAATTGATGAAACAAAAGTAAGTCTTCCCTATGGTTGATTAAAGTATAAGCCTCTTTTAATCAATT--AACTTGTTAAATTAACTAATGTTCTCCAGTTCCCAAGTCTAATAAAGGGACGCTTTTAACAGTCTTAGACCACCTAAAActagtaaacaactctctcctatttgcccccaagcccttt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80753179 373 + 95678458 TTTCAACACTTAGTTTTGAAAGTAT-CCCACTGCTGAACATCCCTTACTTGGTTAGGCCACCCCAATGAAGCAAAACAAATTATCTCTAGTTTGTGTGTATCTGCTGTAATCCTTTTCCCTACCCATCCCCCAAACTGAGTTGACTCTAAAGCAATAAAACAAAATTTAGCCAAGTA---ACTAAGGAGATACAAAATTGATGAAACAAAAGTAAGCCTTCCCTATGGTTGATTAAAGTATAAGCCTCTTTTAATCAATT--AATTTGTTAAATTAACTAATGTTCTCCAGTTCCCAAGTTTAATAAAGGGATGCTTTTAACAGTCTTAGCCCACCTAAAActagtaaacaactctctcctatttgccccctagccc-tt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81179857 373 - 96509753 TTTCAACACTTAGTTTTGAAAGTAT-CCCACTGCTGAACATCCCTTACTTGGTTAGGCCACCCCAATGAAGCAAAACAAATTATCTCTAGTTTGTGTGTATCTGCTGTAATCCTCTTCCCTACCCATCCCCCAAACTGAGTTGACTCTAAAGCAATAAAACAAAATTTAGCCAAGTA---ACTAAGGAGATACAAAATTGATGAAACAAAAGTAAGCCTTCCCTATGGTTGATTAAAGTATAAGCCTCTTttaatcaatt--aatttgttaaattaactaatGTTCTCCAGTTCCCAAGTTTAATAAAGGGATGCTTTTAACAGTCTTAGCCCACCTAAAActagtaaacaactctctcctatttgccccctagccc-tt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76435928 376 + 90941950 TTTCAACACTTAGTTTTGAAAGTAT-CCCACTGCTGAACATCCCTTACTTGGTTAGGCCACCCCAATGAAGCAAAACAAATTATCTCTAGTTTGTGTGTATCTGCTGTAATCCTCTTCCCTACCCATCCCCCAAACTGAGTTGACTctaaagcaataaaacaaaatttagccaAGTAACCACTAAGGAGATACAAAATTGATGAAACAAAAGCCAGCCTTCCCTATGGTTGATTAAAGTATAAGCCTCTTTTAATCAATT--AATTTGTTAAATTAGTTAATGTTCTCCAGTTCCCAAGTTTAATAAAGGGATGCTTTTAACAGTCTTAGCCCACCTAAAACTAGTAAACAACTCTCTCCTATTTGCCCCCTAGCCC-TT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18705095 376 + 33263144 TTTCAACACTTAGTTTTGAAAGTAT-CCCACTGCTGAACATCCCTTACTTGGTTAGGCCACCCCAATGAAGCAAAACAAATTATCTCTAGTTTGTGTGTATCTGCTGTAATCCTCTTCCCTACCCATCCCCCAAACTGAGTTGACTCTAAAGCAATAAAACAAAATTTAGCCAAGTAACCACTAAGGAGATACAAAATTGATGAAACAAAAGTAAGCCTTCCCTATGGTTGATTAAAGTATAAGCCTCTTttaatcaatt--aatttgttaaattaactaatGTTCTCCAGTTCCCAAGTTTAATAAAGGGACGCTTTTAACAGTCTTAGCCCACCTAAAActagtaaacaactctctcctatttgccccctagccc-tt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198409061 379 + 210400635 TTTCAACACTTAGTTTTCCAAGTATCCCCACTGCTGAACATCCCTTACTTGGTTAGACCACCCCAATGAAGCAAAACAAATTATCTCTAGTTTGTGTGTATCTGCTCTAATCCTCTTCCCTACCCATCCCCCAAATTGAGTTGACTCTAAAACCAGAAAACAAAATTTAGCCAAGTAGCCACTAAGGAGATACAAAATTGATGAAACAAAAGTAAGTCTTCCCTATGGTTGATTAAAGTATAAG-CTCTTTTAATCAATTAAAATTGGTTAAATTAACTAATGCTCTCCAGTTCCTAAGTCTAATAAAGGAAAGCTTTTAGTACTCTTAGACCACCTAAAACTAGTAAACAACTCTCTCCTATTTACCCCCAAGCACttt i calJac3.chr1 I 860 I 13 e mm10.chr15 77225470 3054 + 104043685 I e canFam3.chr10 41019162 514 - 69331447 I a score=1144058.000000 s hg38.chr22_KI270876v1_alt 254821 513 + 263666 cttctcccagtagctgagttgtatgcttaccaaaaatcacttgtgtttattcacctgccagtttatagaagtcg-taagttcttataattatataattaaatgt------------------------tatatatatatatatatatat-----------------------atatatacacacatcaatgaaataaattagaaaa-tttccttgaaaataa--ctaatgtgaatgctttgtgaaaaataagtc-aagacactgaaaacttaggctcaaattagatgtgggcaggataact-gtaaaagaccgggcaagaagggaaaaccatacaaatctagatagacagtttcacccaaattgctctgaatgtcatcaagaccgtgttcctcttt--aaaaaaaaaaacaaattagaactcacagatgatgctctgggagcacagtttatgcaaaaaattcaagtagtatttcaatcacatctatatataaggatcttgacctcatatcaggaaactaaagagtaagcatatatttgtttaaattaaaaatgctctatattaaaata s panTro4.chr22 34635036 508 + 49737984 cttctcccagtagctgagttgtatgcttaccaaaaatcacttgtgtttattcacctgccagtttatagaagtcg-taagttcttataattatataattaaatgt------------------------tatatatatatatatatatat-------------------------------acacatcaacgaaataaattagaaaagtttccttgaaaataactctaatgtgaatgcttcgtgaaaaataagtc-aagacactgaaaacttaggctcaaattagatgtgggcaggacaact-gtaaaagactgggcaagaaggg-aaatcataccaatctagatagacagtttcacccaaattgctctgaatgtcatcaagaccgtgttcctcttt-aaaaaaaaaaaacaaattagaactcacagatgatgctctgggagcatagtttatgcaaaaaattcaagtagtatttcaatcacatctatatataaggatcttgacctcatatcaggaaactaaagagtaagcatatatttgtttaaattaaaaatgctctatattaaaata i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31055094 497 + 46535552 cttctcccagtagctaagttgtatgcttaccaaaaatcacttgtgtttattcacctgccagtttatagaagtca-taagttcttataattatataattaaatgt------------------------catatatat-------------------------------------------acacatcaatgaaataaattagaaaagtttccttgaaaacaactctaatgtgaatgctttgtgaaaaataagtc-aagacactgaaaacttttgctcaaattagatgtgggcaggacaactggtaaaagactgggcaagaagggggaatcatacaaatctagataggcagtttcacccaaattgctctgaatgtcattaagactgtgttcctcttt--aaaaaaaaaaacaaattagaactcacagatgatgctctgggagcatggtttatgcaaaaaattcaagtagtatttcaatcacatctatatataaggaccttgacctcatatcaggaaactaaagagtaaacatatatttgtttaaattaaaattgctctatattaaaata i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100612005 505 - 115148730 cttctcccagtagctgagttgtatgcttaccaaaaatcacttgtgtttattcacctgccagtttatagaagtcgttaagttcttataattatataattaaatgt------------------------tatatatatatatat-------------------------------------acacatcaatgaaataaattagaaaagtttccgtgagaacaactctaatgtgaatgctttgtgaaaaataagtc-aagacactggaaacttttgctcaaattagatgtgggcaggacaact-gtaaaagactgggcaagaagggggaatcatacaaatctaaatagacagtttcacccaaattgctctgaatgtcattaagaccgtgttcctctttaaaaaaaaaaaaacaaattagaactcacagatgatgctctgggagcatagtttatgcaaaaaattcaaggagtatttcaatcacatctatatataaggaccttgacctcatatcaggaaactaaagagtaaacatatatttgtttaaattaaaaatgctctatattaaaata i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80753552 530 + 95678458 cttctaccagtagctgagttgtaggcttaccaaaaatcacttgtgtttattcacctgccagtttacagaagtca-taagttcttataattatataattaaatgttatatatatatatgtatgtgtgtgtatatatatatatacacacacnnnnnnnnnnnnnnnnnnnnnnn------------------------------aaaagtttccttgaaaacaactctaatgtgaatgctttgtgaaaaacaagtc-aagacactgaaaacttttgctcaaattagatgtgggcaggacaact-gtaaaagactgggcaagaagggggaatcatacaaatctagctacacagtttgacccaaattactctgaatgtcattaagaccttgttcctcttt-----aaaacaaacaaattagaacgcacagatgatgctctgggagcatagtttatgcaaaaaattcaagtagtatttcaatcacatctatatataaggaccttgacctcatatcaggaaactgaagagtaaacatatatttgtttaaattaaaaacgctctatattaaaata i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81180230 535 - 96509753 cttctaccagtagctgagttgtaggcttaccaaaaatcacttgtgtttattcacctgccagtttacagaagtca-taagttcttataattatataattaaatGTtatatatatatatatgtgtgtgtatatatatatatatatacacac-------------------------acacacacacaTCAATGAAATAAATTAGAAAAgtttccttgaaaacaactctaatgtgaatgctttgtgaaaaacaagtc-aagacactgaaaacttttgctcaaattagatgtgggcaggacaact-gtaaaagactgggcaagaagggggaatcatacaaatctagctacacagtttgacccaaattactctgaatgtcattaagaccttgttcctcttt-----aaaacaaacaaattagaacgcacagatgatgctctgggagcatagtttatgcaaaaaattcaagtagtatttcaatcacatctatatataaggaccttgacctcatatcaggaaactgaagagtaaacatatatttgtttaaattaaaaacgctctatattaaaata i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76436304 511 + 90941950 CTTCTACCAGTAGCTGAGCTGTAGGCTTACCAAAAATCACGTGTGTTTATTCACCTGCCAGTTTACAGAAGTCA-TAAGttcttataattatataattaaatgt------------------------tatatatatatacacacacac-------------------------acacacacatatcaatgaaataaattagaaaagtttCCTTGAAAACAACTCTAATGTGAATGCTTTGTGAAAAACAAGTC-AAGACACTGAAAACTTTTGCTCAAATTAGATGTGGGCAGGACAACT-GTAAAAGACTGGGCAAGAAGGGGGAATCATACAAATCTAGCTACACAGTTTGACCCAAATTACTCTGAATGTCATTAAGACCTTGTtcctcttt-----aaaacaaacaaattagaacGCACAGATGATGCTCTGGGAGCATAGTTTATGCAAAAAATTCAAGTAGTATTTCAATCACATCTATATATAAGGACCTTGACCTCATATCAGGAAACTGAAGAGtaaacatatatttgtttaaattaaaaatgctctatattaaaata i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18705471 508 + 33263144 cttctaccagtagctgagttgtaggcttatcaaaaatcacttgtgtttattcacctgccagtttacagaagtca-taagttcttataattatataattaaatgtttta--------------------tatatatatatatacacacac---------------------------------acatcaatgaaataaattagaaaagtttccttgaaaacaactctaatgtgaatgctttgtgaaaaacaagtctaagacactgaaaacttttgctcaaattagatgtgggcaggacaact-gtaaaagactgggcaagaagggggaatcatacaaatctagctacacagtttgacccaaattactctgaatgtcattaagaccttgttcctcttt-----aaaacaaacaaattagaacgcacagatgatgctctgggagcatagtttatgcaaaaaattcaagtagtatttcaatcacatctatatataaggaccttgacctcatattaggaaactgaagagtaaacatatatttgtttaaattaaaaatgctctatattaaaata i chlSab2.chr19 C 0 C 0 e mm10.chr15 77225470 3054 + 104043685 I e canFam3.chr10 41019162 514 - 69331447 I e calJac3.chr1 198409440 13 + 210400635 I a score=215475.000000 s hg38.chr22_KI270876v1_alt 255334 67 + 263666 aaagtttaaaatatTTCCCCACTTCAACCAATTGTTTAGATTAACCCACGGCCTACTAGTTCTGATC s panTro4.chr22 34635544 67 + 49737984 aaagtttaaaatatTTCCCCACTTCAACCAATTGTTTAGATTAACCCACGGCCTACTAGTTCTGATC i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31055591 67 + 46535552 aaagtttaaaatatttccccacttcaaccagttgttcagattaacccatggcctactagttctgatc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100612510 67 - 115148730 aaagtttaaaatatttccccacttcaaccaattgtttagattaacccatggcctactagttctgatc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80754082 67 + 95678458 aaagtttaaaatatttccccacttcaaccagttgttaagattaacccatggcctactagttctgatc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81180765 67 - 96509753 aaagtttaaaatatttccccacttcaaccagttgttaagattaacccatggcctactagttctgatc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76436815 67 + 90941950 aaagtttaaaatatttccccaCTTCAACCAGTTGTTAAGATTAACCCATGGCCTACTAGTTCTGATC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18705979 67 + 33263144 aaagtttaaaatatttccccacttcaaccagttgttaagattaacccatggcctactagttctgatc i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198409453 67 + 210400635 aaaatttaaaCTATTTCCCCACTTCAACCAATTGTTTAGATTAACCCATGGCCTACTAGTTCTGATC i calJac3.chr1 I 13 C 0 e mm10.chr15 77225470 3054 + 104043685 I e canFam3.chr10 41019162 514 - 69331447 I a score=1611008.000000 s hg38.chr22_KI270876v1_alt 255401 473 + 263666 ACTTTGGTTAAGAAAACACTGACTGTATTTCTTCAATTAGAGA-aggatggccatacatccca---------gtttacctgggactgtttgaaactaattattggcatcactttttattctcaaaagtgccccaacttgaatgctaaagtttatatggtcaccttaTTTATAACAGACATAAAGTTGTTGCACCAAAAGCGAGCGAGGGGCCAGCCTTAggagccttaggacccccat--cactttctaggaaacccctaagagccatcccatataaataatc----ttcgcaaaaacagtaaggctgctgtgcagaacaaggccctcttctaatcagattgctgctcttaagctcttcttatataaaaaccctagagctgATGCACA-TAAGTATTCTCCCACTTTAAAAATACTGCAAATCCATAAAACATTCTAGCCTTAATCAAGGCCTGGGAACACGCCTAAGCACATG--CACAAATCAC----AAACAG s panTro4.chr22 34635611 473 + 49737984 ACTTTGGTTAAGAAAACACTGACTGTATTTCTTCAATTAGAGA-aggatggccatacatccca---------gtttacctgggactgtttgaaactaattattggcatcactttttattctcaaaagtgcccaaacttgaatgctaaagtttatatggtcaccttaTTTATAACAGACATAAAGTTGTTGCACCAAAAGCGAGCGAGGGGCCAGCCTTAggagccttaggacccccat--cactttctaggaaacccctaagagccatcccatataaataatc----ttagcaaaaacagtaaggctgctgtgcagaacaaggccctcttctaatcagattgctgctcttaagctcttcttatataaaaaccctagagctgATGCACA-TAAGTATTCTCCCACTTTAAAAATACTGCAAATCCATAAAACATTCTAGCCTTAATCAAGGCCTGGGAACACGCCTAAGCACATG--CACAAATCAC----AAACAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31055658 468 + 46535552 acattggttaagaAAACACTGACTGTATTTCTTCAATTAGAAA-aggatggccatacatccca---------gtttacctgggactgtatgaaactaattattggcatcactttttattctcaaaagtgcccaaacttgaatgctaaagtctatatggtcaccttaTTTATAACAGACATAAagttgttgcaccaagagcgagcgaggggcc---------agccttaggacccccat--cactttttaggaaacccctaagagccatcccatataaacaatc----ttagcaaaaacagtaagtctgctgtgcagaacaaggccttcttctaatcagattgctgctcttaagctcttcttatataaaaaccctA-AGCTGATACACATTAAGTATTCTCCCACTTTAAAAATACTGCAAATCCATAAAACATTCTAGCCTTAATCAAGGCCTGGGAACACGCCTAAGCACATG--CACAAATCACAAAGAAACAG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100612577 459 - 115148730 acattggttaagaAAACACTGACTGTATTTCTTCAATTAG----aggatggccatacatccca---------gtttacctgggactgtttgaaactaattattggcatcactttttattttcaaaagtgcccaaacttgaatgctaaagtttatatggtcaccttaTTTATAACAGAC--AAAGTTGTTGCACCAAGAGCGAGCGAGGGGCC---------AGCCTTAGGACCCCCAT--CACTTTCTAGGAAACCCCTAAGAGCCATCCCATATAAATAATC----TTAGCAAAAACAGTAAGCCTGCTGTGCAGAACAAGGccctcttctaatcagattgctgctcttaagctcttcttatataaaaaccctagagctgATGCACA-TAAGTATTCTCCCACTTTAAAAATACTGCAAATCCATAAAACACTCTAGCCTTAATCAAGGCCTGGGAACACACCTAAGCACAGG--CACTAATCAC----AAACAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80754149 470 + 95678458 acattgattaagaAAACACTGACTGTATTTCTTCAATTAGAGA-aggatggccatatatccca---------gtttacctgggactgtttgaaactaattattggcatcactttttattctcaaaagtgctcaaacttgaatgctaaagtttatatggtcaccttaTTTATAACAGACATAAAGTTGTTGCACCAAGAGTGAGCAAGGGGCC---------AGCCTTAGGACCCCCAT--CACTTTCCAGAAAACCCTTAAGAGCCATCCCATATAAACAATC----TTAGCAAAAACAGGAAGCCTGCTGTGCAGAACAAAGccctcttctaatcagattgctgctcttaagttcttcttatataaaaaccctagagctgATGCACA-CAAGTATTCTCCCACTTTAAAAATACTGCAAATCCATAAAACATTCCAGCCTTAATCAAGGCCCAGGAACACGCCTAAGCACATGCACATAAATCACAAATAAACAG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81180832 470 - 96509753 acattggttaagaAAACACTGACTGTATTTCTTCAATTAGAGA-aggatggccatatatccca---------gtttacctgggactgtttgaaactaattattggcatcactttttattctcaaaagtgcccaaacttgaatgctaaagtttatatggtcaccttaTTTATAACAGACATAAagttgttgcaccaagagtgagcaaggggcc---------agccttaggacccccat--cactttccagaaaacccttaagagccatcccatataaacaatc----ttagcaaaagcaggaagcctgctgtgcagaacaaagccctcttctaatcagattgctgctcttaagttcttcttatataaaaaccctagagctgATGCACA-CAAGTATTCTCCCACTTTAAAAATACTGCAAATCCATAAAACATTCCAGCCTTAATCAAGGCCCAGGAACACGCCTAAGCACATGCACATAAATCACAAATAAACAG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76436882 470 + 90941950 ACATTGGTTAAGAAAACACTGACTGTATTTCTTCAATTAGAGA-AGGATGGCCATATATCCCA---------GTTTACCTGGGACTGTTTGAAACTAATTATTGGCATCACTTTTTATTCTCAAAAGTGCCCAAACTTGAATGCTAAAGTTTATATGGTCACCTTATTTATAACAGACATAAAGTTGTTGCACCAAGAGTGAGCAAGGGGCC---------AGCCTTAGGACCCCCAT--CACTTTCCAGAAAACCCTTAAGAGCCATCCCATATAAACAATC----TTAGCAAAAACAGGAAGCCCGCTGTGCAGAACAAAGCCCTCTTCTAATCAGATTGCTGCTCTTAAGTTCTTCTTATATAAAAACCCTAGAGCTGATGCACA-CAAGTATTCTCCCACTTTAAAAATACTGCAAATCCATAAAACATTCCAGCCTTAATCAAGGCCTGGGAACATGCCTAAGCACATGCACATAAATCACAAATAAACAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18706046 469 + 33263144 acattggttaagaAAACACTGACTGTATTTCTTCAATTAGAGA-aggacagccatatatccca---------gttttcctgggactgtttgaaactaattattggcatcactttttattctcaaaagtgcccaaacttgaatgctaaagtttatatggtcaccttaTTTATAACAGACATAAAGTTGTTAcaccaagagtgagcaaggggcc---------agccttaggacccccat--cactttccagaaaacccctaagagccatcccatataaacaatc----ttagcaaaaacaggaagcctgctgtgcagaacaaagccctcttctaatcagattgctgctcttaagttcttcttatataaaaaccctagagctgATGCACA-CAAGTATTCTCCCACTTTAAAAATACTGCAAATCCATAAAACATTCCAGCCTTAATCAAGGCCTGGGAACACGCCTAAGCACATG-ACATAAATCACAAATAAACAG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198409520 469 + 210400635 ACATTGGTTAAGAAAACACTGACTGTATTTCTTTAATTATAAA-aggatgcccatacatccca---------gtttacctggaactgtttgaaactaattattggcatcactttttattctcaaaagtgtccaaacttgaatgctaaggtttatatggtcaccttaTTTATAGCAGACATAAagttgttgcaccaagaaagagtgaggggct---------agccttaggacccccat--cactttccaggaaacccctaagcgccatcccatataaacaatc----ttagcaaaaacagtaagcttgctgtacagaacaaagccttcttctaatcagattgctgctcttaagctcttcttatataaaaaccctagagctgATGTACA-CAAGTATTCTCCTACTTTAAAAATA-TGCAAATCCATGAAACATTCTAGCCTTAATCAAAGCCTGGGAACACTCCTAAGCACATGCACATAAATCACAAAGAAACAG i calJac3.chr1 C 0 C 0 s canFam3.chr10 41019676 462 - 69331447 ACATCAGTTAAGGGGACATTCACTACAGTTCCGTAATTATGGCTAAAATGACCATATATCCCACTCATCTCGGTTTGCCTGGG-CTGTTTCAA------TAGGagcattgctttgcactctcaaaagtgccccaactagaatgatgaa--ttctatggccgcccta-ATAGAGCAGACATAAagttatggcaccgagaggtggcaaggagct--------gggccttggaactcccactgtactctccagaagccccctgaaagccatcctaaataaacaaacaatgttagcaaaaacagtaagcttgctatgcagaactaagcccccttctaatcaggctgctactcctaagcaccccctatctaaaaatgctaaagcTAATGCACA-CAAATATTCTCCCA-TTTAAAAATATTACAAACCCACAAAATATTCCAGCCTTAATCAACACTCAAA--------TAAGCACTTG--TGCTATACAT----AAACAA i canFam3.chr10 I 514 C 0 e mm10.chr15 77225470 3054 + 104043685 I a score=349750.000000 s hg38.chr22_KI270876v1_alt 255874 112 + 263666 TCAACTAGGAATCTAAACCACTACATTGTATCATCAATCTAAAATCCTGcctgg----gtttatttattcattta-tttttgagacagggtcttgttctgtcacccaggctggagcg s panTro4.chr22 34636084 112 + 49737984 TCAACTAGGAATCTAAACCACTACATTGTATCATCAATCTAAAATCCTGcctgg----atttatttattcattta-tttttgagacagggtcttgttctgtcgcccaggctggagcg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31056126 112 + 46535552 TCAACTAGGAATCTAAACCACTACATTGTATCATCAATGTAAAATCCTGCCTGG----ATTTATTTATTCAttta-tttttgagacagggtcttgttctgtcacccaggctggagtg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100613036 113 - 115148730 TCAACTAGGAATCTGAACTACTACATTGTATCGTCAATCTAAAATCCTGcctgg----atttatttattcatttattttttgagacagggtcttgttctgtcgcccaggctggagtg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80754619 116 + 95678458 TCAACTAGGAATCTAAACCACTACATGGTATCATCAATCTAAAATCCTGCCTGGCtttatttatttattcattta-tttttgagacagggtcttgttctgtcgcccaggctggagtg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81181302 116 - 96509753 TCAACTAGGAATCTAAACCACTACATGGTATCATCAATCTAAAATCCTGCCTGGCtttatttatttattcattta-tttttgagacagggtcttgttctgtcgcccaggctggagtg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76437352 116 + 90941950 TCAACTAGGAATCTAAACCACTACATGGTATCATCAATCTAAAATCCtgcctggctttatttatttattcattta-tttttgagacagggtcttgttctgtcgcccaggctggagtg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18706515 116 + 33263144 TCAACTAGGAATCTAAACCACTACATGGTATCATCAATCTAAAATCCTGCCTGGCtttatttatttattcattta-tttttgagacagggtcttgttctgtcgcccaggctggagtg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198409989 112 + 210400635 TCAACTAGGAATCTAAACTACTACATTGTATCATCAATCTAAAATCCTGCCTGG----TCTTATTTATTCAttta-tttttcagacagggtcttgctctgtcgcccaggctggagtg i calJac3.chr1 C 0 C 0 e mm10.chr15 77225470 3054 + 104043685 I e canFam3.chr10 41020138 0 - 69331447 C a score=1541881.000000 s hg38.chr22_KI270876v1_alt 255986 477 + 263666 cagtggcacaatcatagctcaccacagcctcaatctcccaggttccagcaatcctcccacctcagcctcccgagtagctgggactacaggcacacaccactacacccggctgattt-tttttatttttagtagagacaaggtcttgctatgttgcccaggctggtctccaactcctgagctcaaacaatcctcctgccttggcctcccaaagtgctgggattatagatgtaagccactgcacttggtcctgcatggcctt-agataaaatttctcacttttctgaactag---ttttcacttatgtaaaactggaacaatgtttgtctcctccacttccatagagaaaccacattagaaagtatagtgaaatgctcagagtgctttataaaagcaatggattgtcatCCCATAAAGCTTCTTAATAGATCAAGAAAGAAGGCTGAGGTGACCTTGCATAAACATGCAA---------GAGGTGGCGGGTGG s panTro4.chr22 34636196 476 + 49737984 cagtggcacaatcatagctcaccgcagcctcaatctcccaggttccagcaatcctcccacttcagcctcccgagtagctgggactacaggcacacaccaccacacccagctga-tt-tttttatttttagtagagacaaggtcttgctatgttgcccaggctggtctccaactcctgagctcaaacaatcctcctgccttggcctcccaaagtgctgggattatagatgtaagccactgcacttggtcctgcatggcctt-agataaaatttctcacttttctgaactag---ttttcacttatgtaaaactggaacaatgtttgtctcctccacttccatagagaaaccacattagaaagtatagtgaaatgctcagagtgctttataaaagcaatggattgtcatCCCATAAAGCTTCTTAATAGATCAAGAAAGAAGGCTGAGGTGACCTTGCATAAACATGCAA---------GAGGTGGCGGGTGG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31056238 474 + 46535552 cagtggcatagtcatagctcaccgcagcctcaatctcccaggctccagcaatcctcccacctcagcctcccgagtagctgggactacaggcacacaccaccacacccggctgattt-tttttatttttagtagagacaaggtcttgctatgttgcccaggctggtctccaactcctgagctcaaacaatcctcctgccttggcctcccaaagtgctgggactacagatgtaagccactgcacttggtcCTGCATGGCCTT-AGATAAAATTTCTCACTTTTCTGAACTAG---TTTTCACTTATGTAAAACTGGAAC---GTTTGTCTCCTCCACTTCCATAGAGAAACCACATTAGAAAGTATAGTGAAATGCTTAGAGTGCTTTATAAAAGCAATGGATTGTCATCCCATAAAGCTTCTTAATAGATCAAGAAAGAAGGCTGAGGTGACCTTGCATAAACATGCAA---------GAGGTGGTGGGTGG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100613149 478 - 115148730 cagtggcacaatcatagctcaccgtcgcctcaatctcccaggctccagcaatcctcccacctcagcctcccgagtagctgggactacaggcacacaccaccacacccggctgattt-tttttatttttggtagagacaaggtcttgctatgttgcccaggctggtctccaacttctgagctcaaacaatcctcctgccttggcctcccaaagtgctgggattatagatgtaagccacggcacttggtcctgcatggccttaaggtaaaatttctcacttttctgaactagtttttttcacttatgtaaaactggaacaatgcttgtctcctccacttccatagagaaaccacattagaaagtatagtgaaatgcttagagtgctttataaaagcaatggattgtcatCCCATAAAGCTTCTTAATAGATCAAGA---AAGGCTGAGGTGACCTTGCATAAACATGCAA---------GAGGTGGCGGGTGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80754735 477 + 95678458 cagtggcacaatcatagctcaccacggcctcaatttcccaagctcaagcgatcttcccacctcagcctcccaagcagctgggactacaggcacatactaccacactcggctggttt-tttttatttttagtaaagacaaggtcttgctatgttgcccaggctggtctccaactcctgagctcaaacaatcctcctgcctcggcctcccaaagtgctgggattatagatgtaagccactgcacttggtcCTGCATGGCCTT-AGATAAAATTTCTCACTTTTCTGAACTAG---TTTTCACTTATGTAAAACTGGAACAGTGTTTGTCTCCTCCACTTCCATAGAGAAACCACATTAGCAAGTATAGTGAAATGCTCAGAGTGCTTTCTAAAAGCAATGGATTGTCATCCCATAAAGCTTCTTAACAGATCGGGAAAAAAGGCTGAGGTGACCGTGCATAAACATGCAA---------GAGGTGGCAGGTGG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81181418 477 - 96509753 cagtggcacaatcatagctcaccacagcctcaatttcccaggctcaagcgatcttcccacctcagcctcccaagtagctgggactacaggcacatactaccacactcggctgattt-tttttatttttagtaaagacaaggtcttgctatgttgcccaggctggtctccaactcctgagctcaaacaatcctcctgcctcggcctcccaaagtgctgggattatagatgtaagccactgcacttggtcCTGCATGGCCTT-AGATAAAATTTCTCACTTTTCTGAACTAG---TTTTCACTTATGTAAAACTGGAACAGTGTTTGTCTCCTCCACTTCCATAGAGAAACCACATTAGCAAGTATAGTGAAATGCTCAGAGTGCTTTCTAAAAGCAATGGATTGTCATCCCATAAAGCTTCTTAACAGATCGGGAAAAAAGGCTGAGGTGACCGTGCATAAACATGCAA---------GAGGTGGCAGGTGG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76437468 477 + 90941950 cagtggcacaatcatagctcaccgcagcctcaatttcccaggctcaagcgatcttcccacctcagcctcccaagtagctgggactacaggcacacactaccacactcggctgattt-tttttatttttagtaaagacaaggtcttgctatgttgcccaggctggtctccaactcctgagctcaaacaatcctcctgcctcggcctcccaaagtgctgggattatagatgtaagccactgcacttggtcCTGCATGGCCTT-AGATAAAATTTCTCACTTTTCTGAACTAG---TTTTCACTTATGTAAAACTGGAACAGTGTTTGTCTCCTCCACTTGCATAGAGAAACCACATTAGCAAGTATAGTGAAATGCTCAGAGTGCTTTCTAAAAGCAATGGATTGTCATCCCATAAAGCTTCTTAACAGATCGGGAAAAAAGGCTGAGGTGACCGTGCATAAACATGCAA---------GAGGTGGCAGGTGG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18706631 477 + 33263144 tagtggcacaatcatagctcaccgcagcctcaatctcccaggctcaagcgatcctcccacctcagcctcccaagtagctgggactacaggcacacactaccacactcggctgattt-tttttatttttagtaaagacaaggtcttgctatgttgcccaggctggtctccaactcctgagctcaaacaatcctcctgcctcggcctcccaaagtgctgggattatagatgtaagccactgcacttggtcCTGCATGGCCTT-AGATAAAATTTCTCACTTTTCTGAACTAG---TTTTCACTTATGTAAAACTGGAACAGTATTTGTCTCCTCCACTTCCATAGAAAAACCACATTGGCAAGTATAGTGAAATGCTCAGAGTGCTTTCTAAAAGCAATGGATTGTCATCTCATAAAGCTTCTTAACAGATCGGGAAAGAAGGCTGAGGTGACCGTGCATAAACATGCAA---------GAGGTGGCAGGTGG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198410101 478 + 210400635 cagtggcacaatcatagctcactgcagcctcaatctcataggctcaagcaatcctcccacttcagcctcccaagtagctgggactacaggcacacaccaccacatctggctgatttgtttttatttttagtagagacaaggtcttgctatgttgcccaggctggtctccaactcctgagctcaaacaatcctcccaccttagcctcccagagtattgggattatagatgtaagccactgcactttgccCTGCATGGCCTT-AGATAAAATTTCTCACTTTTCTGAACTAG---TTTTTACTTAGGCAAAACTGGAACAATGTTTGTCTCCTCCACTTCCATAGAGAAACCACATTAGCAGGTATAATGAAATGCTTAAAGTGCTTTATAAAAGCAATGGATTGTCATCCCATAAAGCTTCTTAACAGATCAGGAAAGAAGGCTGAGGTTACCTTGCATAAAAATGCAA---------GAGGTGGCCGGTGG i calJac3.chr1 C 0 C 0 s canFam3.chr10 41020138 288 - 69331447 CAGAGAAACAATC--------------------------------------------------------------AGCTGGGAAT------------------------CTAAATC-----------------------------ACTATATTGC-----ATGGTC-----------AACCCAACC------------------------------------------------------------TCCTGCATGGCCTT-AGGTGAGA-CACTCAGTTTTCC-AGCTGG---TTTTCACTTCTGTAAGTCTGG-ACAATGTTCGTCTCCTCCACTTCCACAGAG----CCCATTAGCAAACA-GGGGAAGTGCTCGAAGAGTTTTATGAATGCAATGGATTGTCATCTCATAAAGCTTGCTAACTGACTAGGAAAGAAGGCTAGGGTTACTGCACATAAAAAAGCAAAACCTCTACAAGGTGGCAAGTAT i canFam3.chr10 C 0 C 0 e mm10.chr15 77225470 3054 + 104043685 I a score=694044.000000 s hg38.chr22_KI270876v1_alt 256463 201 + 263666 -TTTTCCCTGCTCCTTTCCTT--CAGGTGTTTAACTCCAATGTG--CTATTGGGACTGTATATAACATGACAAA-AGAATCACTAAAAAAGTGAAATGCTGGTGGTACACTTGG-TGCTAACAAACTTAGTAGTAATAATCTTTAATCAGGAGTCACAGACT-------TCTACATCTGTGGTTGAGCTTGAAGAAGTCTACGAAGCCCCCACAT s panTro4.chr22 34636672 201 + 49737984 -TTTTCCCTGCTCCTTTCCTT--CAGGTGTTTAACTCCAATGTG--CTATTGGGACTGTATATAACATGACAAA-AGAATCACTAAAAAAGGGAAATGCTGGTGGTACACTTGG-TGCTACCAAACTTAGTAGTAATAATCTTTAATCAGGAGTCACAGACT-------TCTACATCTGTGGTTGAGCTTGAAGAAGTCTACGAAGCCCCCACAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31056712 201 + 46535552 -TTTTCCCTGCTCCTTTCCTT--CAGGTTTTTAACTCAAATGTG--CTATTGGGACTGTATATAACATGATAAA-AGAATCATTAAAAAAGTGAAATGCTGGTGGTACACTTGG-TGCTAACAAACTTAGTAGTAATAATCTTTAATCAGGAGTCACGGACT-------TCTACATCTGTGGTTGAGCTTGAAGAAGTCTATGAAGTCCCCACAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100613627 201 - 115148730 -TTTTCCCTGCTCCTTTCCTT--CAGGTTTTTAACTCAAATGTG--CTATTGGGACTGTATATAACATGATAAA-AGAATCACTAAAAAAGTGAAATGCTGGTGGTACACTTGG-TGCTAACAAACTTGGTAGTAATAATCTTTAATCAGGAGTCACGGACT-------TCTACATCTGTGGTTGAGCTTGAAAAAGTCTATGAAGCCCCCATAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80755212 201 + 95678458 -TTTTCCCTGCTCCTTTCCTT--CAGGTTTTTAACTCAAATGTG--CTATTGGGACTGTATGTAATATGATAAA-AGAATCACTAAAAAAGTGAAATGCTGGTGGTACACTTGG-TGCTAACAAACTCAGTAGTAATAATCTTTAGTCAGGAGTCACGGACT-------TCTACGTCTGTGGTTGAGCTTGAAGAACTCTATGAAGCCCCCACAT i rheMac3.chr10 C 0 I 8 s macFas5.chr10 81181895 201 - 96509753 -TTTTCCCTGCTCCTTTCCTT--CAGGTTTTTAACTCAAATGTG--CTATTGGGACTGTATGTAATATGATAAA-AGAATCACTAAAAAAGTGAAATGCTGGTGGTACACTTGG-TGCTAACAAACTCAGTAGTAATAATCTTTAGTCAGGAGTCACGGACT-------TCTACGTCTGTGGTTGAGCTTGAAGAACTCTATGAAGCCCCCACAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76437945 201 + 90941950 -TTTTCCCTGCTCCTTTCCTT--CAGGTTTTTAACTCAAATGTG--CTATTGGGACTGTATATAATATGATAAA-AGAATCACTAAAAAAGTGAAATGCTGGTGGTACACTTGG-TGCTAACAAACTCAGTAGTAATAATCTTTAGTCAGGAGTCACGGACT-------TCTACGTCTGTGGTTGAGCTTGAAGAAGTCTATGAAGCCCCCACAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18707108 201 + 33263144 -TTTTCCCTGCTCCTTTCCTT--CAGGTTTTTAACTCAAATGTG--CTATTGGGACTATATATAATATGATAAA-AGAATCACTAAAAAAGTGAAATGCTGGTGGTACACTTGG-TGCTAACAAACTCAGTAGTAATAATCTTCAGTCAGGAGTCACGGACT-------TCTACGTCTGTGGTTGAGCTTGAAGAAGTCTATGAAGCCCCCACAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198410579 198 + 210400635 -TTTTCCCTACTCGTTTCAGT--CAGATTTCTAATTCAAATGTG--CTATTGGGACTGTATATAACATGATAAA-AGAGTCACTTAAAAAGTGAAATGC---TGGTACACTTGG-TGCTAACAAACTTAGTAGTAATAATCTTTAATCAGGAGTCATGGAAT-------TCTACATCCATGGTTGAGCTTGAACAAGTCTATGAAGCCCTGACAT i calJac3.chr1 C 0 C 0 s mm10.chr15 77228524 184 + 104043685 -TTCTTCCTGCT--TCTCCTC--ATGGGATTTAACATAACTGTGTCCTATCAGT------TACAACAGGGTGAC-TGGGCTGCAGAAGCAGTGGAATGC---TGGCGTACTGAGTTGATGATGAACTGAG----------------CCAGTGGTCATGCACTCTTCCTACCTAGATCTATGGCTAAGCATCATAAAGTCTAGGAAACCTCTAAAT i mm10.chr15 I 3054 C 0 s canFam3.chr10 41020426 182 - 69331447 TTTATTTCCCCTTCTTTGCTGCACAGGTTTCTAATTCAAATGTG-----GCGGGAACTTACAGAACAGGATGAATAAGGTCACT-AAACAGTGAGATGC---TGGTTTGCTTGG-TGCTAAGGAATTCAGGGGGGATAATCCCTAACCAGG-------GACC----------------ATGGTTGAGCTTCATGAGGCCTATGAAGCCCCCAAAT i canFam3.chr10 C 0 C 0 a score=12083.000000 s hg38.chr22_KI270876v1_alt 256664 9 + 263666 GGTAAATAA s panTro4.chr22 34636873 9 + 49737984 GGTAAATAA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31056913 9 + 46535552 GGTAAATAA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100613828 9 - 115148730 GGTAAATAA i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 81182096 7 - 96509753 --TACTTTA i macFas5.chr10 C 0 I 1 s papAnu2.chr10 76438146 7 + 90941950 --TACTTTA i papAnu2.chr10 C 0 I 1 s chlSab2.chr19 18707309 7 + 33263144 --TATTTTA i chlSab2.chr19 C 0 I 1 s calJac3.chr1 198410777 9 + 210400635 GGTAAATAA i calJac3.chr1 C 0 C 0 s mm10.chr15 77228708 8 + 104043685 -GGAAGTAA i mm10.chr15 C 0 C 0 s canFam3.chr10 41020608 9 - 69331447 GATAAATGA i canFam3.chr10 C 0 C 0 e rheMac3.chr10 80755413 8 + 95678458 I a score=902681.000000 s hg38.chr22_KI270876v1_alt 256673 253 + 263666 AATAATGTAAATGAGTGAATGGGCACATTCACACGTGACCACATTTTCCTATG-GTCAATCAATAATTCTCCAgtacagagaaaaggaccct---cagacagaaggggaaatttcagctcttatttagctacttacttgaattgttgccttggataagtcactttacctctgtgtgcttcaatttcctcatctttccagagggaatatttgcctcatctacttcaaaag--------gggtgtttgggagaataagatgagaaaa s panTro4.chr22 34636882 253 + 49737984 AATAATGTAAATGAGTGAATGGGCACATTCACACGTGACCACATTTTCCTATG-GTCAATCAATAATTCTCCAgtacagagaaaaggaccct---cagacagaaggggaaatttcagttcttatttagctacttacttgaattgttgccttggataagtcactttacctctgtgtgcttcaatttccttatctttccagagggaatatttgcctcatctacttcaaaag--------gggtgtttgggacaataagatgagaaaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31056922 252 + 46535552 AATAATGTAAACGAGTCAACGGGCACATTCACACGTGACCACATTTTCCTATG-GTCAATCAATAATTCTCCAgtacagagaaaaggaccct---cagacagaa-gggaaatttcagttcttatttagctacttacttgaattgttgccttggataagtcactttatctctgtgtgcttcaatttccttatctttccaaagggaatatttgcctcatctacttcaaaat--------gggtgtttgggagaataagatgagaaaa i ponAbe2.chr22 C 0 M 292 s nomLeu3.chr7b 100613837 252 - 115148730 AATAATGTAAATGAGTGAATGGGCACATTCACACGTGACCACATTTTCCTATG-GTCAATCAACAATTCTCCAgtacagagaaaaggaccct---cagacagaa-gggaaatttcagttcttatttagctacttacttgaattgttgccttggataagtcactttacctctgtgtgcttcaatttctttatctttccaaagggaatatttgcctcatctacttcaaaaa--------gggtggttgggagaataagatgagaaaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80755421 252 + 95678458 AATAATGTAAATGAGTGAATGGGCACATTCACACATGACCACATTTTCCTCTG-GTCAATAAATAATTCTCcagtacaaagaaaaggaccct---cagacagaa-gacaaatttcagttcttattcagccacttacttgaattgttgccttggataagtcactttacctctgtgcgcttcaatttccttatctttccaaagggaatatttgcctcatctacttcaaaag--------gggtgtttggaagaataagatgagaaaa i rheMac3.chr10 I 8 C 0 s macFas5.chr10 81182104 252 - 96509753 AATAATGTAAATGAGTGAATGGGCACATTCACACATGACCACATTTTCCTCTG-GTCAATAAATAATTCTCcagtacagagaaaaggaccct---cagacagaa-gacaaatttcagttcttattcagccacttacttgaattgttgccttggataagtcactttacctctgtgcgcttcaatttccttatctttccaaagggaatatttgcctcatctacttcaaaag--------gggtgtttggaagaataagatgagaaaa i macFas5.chr10 I 1 C 0 s papAnu2.chr10 76438154 252 + 90941950 AATAatgtaaatgagtgaatgggcACATTCACACATGACCACATTTTCCTCTG-GTCAATAAATAATTCTCCAGTACAGAGAAAAGGACCCT---CAGACAGAA-GACAAATTTCAGTTCTTATTCAGCCACTTACTTGAATTGTTGCCTTGGATaagtcactttacctctgtgcgcttcaatttccttatctttccAAAGGGAATATTTGCCTCATCTACTTCAAAAG--------GGGTGTTTGGAAGAATAAGATGAGAAAA i papAnu2.chr10 I 1 C 0 s chlSab2.chr19 18707317 252 + 33263144 AATAATGTAAATGAGTGAATGGGCACATTCACACATGACCACATTTTCCTCTG-GTCAATAAATAATTCTCcagtacagagaaaaggaccct---cagacagaa-gacaaatttcagttcttattcagccacttacttgaattgttgccttggataagtcactttacctctgtgcgcttccatttccttatctttccaaagggaatatttgcctcatctacttcaaaag--------gggtgtttggaagaataagatgagaaaa i chlSab2.chr19 I 1 C 0 s calJac3.chr1 198410786 251 + 210400635 AATAATGTGAGTGAGTGAATGGGCACATTCACAGACGACCACATTTTCCTCTG-GTCAATCAATAATTCTCcagtacagagaaaaggaccct---caaacagaa-gacaagttttagttctcattcagctacttacttcagttgttgccttggataagtcac-ttacctctgtgttcttcaatttccttatttttccaaaggaaatacttgtctcatctacttcaaaag--------gggtggttgggagaataagatgagaaag i calJac3.chr1 C 0 I 1 s mm10.chr15 77228716 208 + 104043685 AACCAAG--AGCGAGCCAGTGAGT------------------------------GTCAGTCA-----CCTCCACTTTGAAGAAATGGACA-----CAGGCACAA-AAGACGTTCAAGATCTGATT-AGGTGCTGACTTCAACTGCAGCCTTGGG-AAGGCATCTTACTGGTG------------CCCTTGCCTTCCCAAAGGGAACATTTGCATCTTCTACTGTAAGAGAAGTCAGAGagcacttgggaggcagaggcaggcgga i mm10.chr15 C 0 I 1 s canFam3.chr10 41020617 248 - 69331447 -----AGTAGGGGAGTGAGCAGGCACACACATACATGACCACACTTTTCATTGTGTGAGGGAACAA-TCCCCAGGAcagaggaaagggccctcaacaaaggaaa-gacaaatctcagttcttatgcagctactaactggtatggttaccttggataagtcactttatctgtgtgcacctcagtttcctcctctgtccaaaggaagtgtttgccttttctacttcaaaag----------ataactgtgaggaggaggtgggaaag i canFam3.chr10 C 0 C 0 a score=-2370.000000 s hg38.chr22_KI270876v1_alt 256926 2 + 263666 ta s panTro4.chr22 34637135 2 + 49737984 ta i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100614089 2 - 115148730 ta i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80755673 2 + 95678458 ca i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81182356 2 - 96509753 ca i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76438406 2 + 90941950 CA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18707569 2 + 33263144 ca i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198411038 2 + 210400635 ac i calJac3.chr1 I 1 C 0 s mm10.chr15 77228925 1 + 104043685 t- i mm10.chr15 I 1 I 259 s canFam3.chr10 41020865 2 - 69331447 ca i canFam3.chr10 C 0 C 0 e ponAbe2.chr22 31057174 292 + 46535552 M a score=332418.000000 s hg38.chr22_KI270876v1_alt 256928 127 + 263666 -caatgaaagtgGTCCAAAACAATCAAAAGAG-----TT-ATCTCTTTT-TAAATCACCATTCAGCCACTGATAAGAATCTTGTCTGCAGATGGTTCTCATCTATTTAGGAAGGAACAGTGAAAGAATAAGGAAA s panTro4.chr22 34637137 127 + 49737984 -caatgaaagtgGTCCACAACAATCAAAAGAG-----TT-ATCTCTTTT-TAAATCACCATTCAGCCACTGATAAGAACCTTGTCTGCAGATGGTTCTCATCTATTTAGGAAGGAACAGTGAAAGAATAAGGAAA i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100614091 127 - 115148730 -aaatgaaagtgATCCACAACAATCAAAAGAG-----TT-ACCTCTTTT-TAAATCACCATTCAGCCACTGATAAGAATCTTGTCTGCAGATGGTTCTCATCTATTTAGAAAGGAACAGAGAAAGAATAAGGAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80755675 128 + 95678458 -ccatgaaagtgGTCCACAGCAATCAAAAGAG-----TT-ACCTCTTTTAAAAATCACCATTCAGCCACTGATAAGAATCTTGTCTGCAGACGGTTCTTATCTATTTAGAAAGGAACAGTGAAAGAATAAGGAAA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81182358 128 - 96509753 -ccatgaaagtgGTCCACAGCAATCAAAAGAG-----TT-ACCTCTTTTAAAAATCACCATTCAGCCACTGATAAGAATCTTGTCTGCAGATGGTTCTTATCTATTTAGAAAGGAACAGTGAAAGAATAAGGAAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76438408 127 + 90941950 -CCATGAAAGTGGTCCACAGCAATCAAAAGAG-----TT-ACCTCTTTT-AAAATCACCATTCAGCCACTGATAAGAATCTTGTCTGCAGACGGTTTTTATCTATTTAGAAAGGAACAGTGAAAGAATAAGGAAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18707571 128 + 33263144 -ccatgaaagtgGTCCACAACAATCAAAAGAG-----TTAACCTCTTTT-AAAATCACCATTCAGCCACTGATAAGAATCTTGTCTGCAGACGGTTCTTATCTATTTAGAAAGGAACAGTGAAAGAATAAGGAAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198411040 127 + 210400635 -tgattaaagtgctccgcaaCAATCAAAAGAG-----TT-ACCTCTTTT-AAAATCACCATTCAACCACTGATAAGAACCTTGTCTGTGGATGGTTCTTACCTATTTAGAAAGGAACAGCTAAAGAATAAGGAAA i calJac3.chr1 C 0 C 0 s canFam3.chr10 41020867 132 - 69331447 ctgataacagtgctttAGGAGGATTAGGATTGTAACTTT-GTCTCTTTT-AAAATCACC-CAGAGATGCTGATAAAAATCCTGTCTGGGGAAGGTTCCTATTTGTTTAGAAAGGAACAGCAAAAGAATAAGGAGG i canFam3.chr10 C 0 C 0 e mm10.chr15 77228926 259 + 104043685 I e ponAbe2.chr22 31057174 292 + 46535552 M a score=17732.000000 s hg38.chr22_KI270876v1_alt 257055 9 + 263666 GCAAACAGg s panTro4.chr22 34637264 9 + 49737984 GCAAACAGg i panTro4.chr22 C 0 C 0 s nomLeu3.chr7b 100614218 9 - 115148730 GCAAACAGg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80755803 8 + 95678458 GCAAACAG- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81182486 8 - 96509753 GCAAACAG- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76438535 9 + 90941950 GCAAAcagg i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18707699 9 + 33263144 GCAAACAGg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198411167 9 + 210400635 GCAAACAGg i calJac3.chr1 C 0 C 0 e mm10.chr15 77228926 259 + 104043685 I e canFam3.chr10 41020999 0 - 69331447 C e ponAbe2.chr22 31057174 292 + 46535552 M a score=460787.000000 s hg38.chr22_KI270876v1_alt 257064 171 + 263666 ccgggtgtggtggcacacacctgtggtcccagctactcaggaggctgaggtgggagaatcacttgcaccccaggggtcaaggctgcagtgagccatgttcatgccactgcactccagtatgggtgacagagcaagaccct----------gtctcaaaaaccaaaccaaaccaacaacaac s panTro4.chr22 34637273 171 + 49737984 ccgggtgtggtggcacacacctgtggtcccagctactcaggaggctgaggtgggagaatcacctgctccccaggagtcaaggctgcagtgagccatgttcatgccactgcactccagtatgggtgacagagcaagaccct----------gtctcaaaaaCCaaaccaaaccaacaacaac i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31057466 171 + 46535552 ccgggtgtggtggcacacacctgtggtcccagctactcaggaggctgaggtgggagaatcacttgcaccccgggggtcaaggctgcagtgagccatgttcatgccattgcactccagtatgggcgacagagcaagacact----------gtctcaaaaaCCAAACCAAACcaaaaacaac i ponAbe2.chr22 M 292 C 0 s nomLeu3.chr7b 100614227 169 - 115148730 ccgggtgtggtggcacacacctgtggtcccagctactcaggaggctgaggtgggagaatcacttgcaccctaggggtcaaggctgcagtgagccacgttcatgccactgcactccagtatgggcgacagagcaagaccct----------gtctcaaaaaCCAAACCAAACCAaaa--aac i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80755811 162 + 95678458 --------------Acacgcctgtggccccagctactcaggaggctgaggtgggacgatcacttgcgccccgggggtcaaggctgcagggagccatgttcatgccactgcactccagtgtgggcgacagagcaagacccttttggttttggtctcaaaaaccaaaccaaacca-----aac i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81182494 162 - 96509753 --------------Acacgcctgtggccccagctactcaggaggctgaggtgggacgatcacttgcgccccgggggtcaaggctgcagggagccatgttcatgccactgcactccagtgtgggcgacagagcaagacccttttggttttggtctcaaaaaccaaaccaaacca-----aac i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76438544 175 + 90941950 -ccggtgtggtggcacacgcctgtggccccagctactcaggaggctgaggtgggacgatcacttgcgccccggaggtcaaggctgcagggagccatgttcacgccactgcactccagtgtgggcgacagagcaagacccttttgGTTTtggtctcaaaaaccaaaccaaacca-----aac i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18707708 175 + 33263144 -ccggtgtggtggcacacacctgtggccccagctactcaggaggcggaggtgggacgatcacttgcgccccggggctcaaggctgcagggagccatgttcacgccactgcactccagtgtgggcgacagagcaagacccttttggttttggtctcaaaaatcaaaccaaacca-----aac i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198411176 165 + 210400635 ccaggtgtggtggcacacacctgtggtcccagctactgaggaggctgaggagggaggattacttgagcccaggatgtcaaggctgcagtgagccatgttcataccactgcactctagtctgggtggcagagcaagactat----------gtctcaaaaaacaaaCC-AACCA-----AAC i calJac3.chr1 C 0 C 0 e mm10.chr15 77228926 259 + 104043685 I e canFam3.chr10 41020999 0 - 69331447 C a score=36322.000000 s hg38.chr22_KI270876v1_alt 257235 30 + 263666 aaaaa-------------------------------aaaaaaaaaaa-----aaaAGGGAAAGCAA s panTro4.chr22 34637444 25 + 49737984 ------------------------------------aacaaaaaaaa-----aaaagggaaagcaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31057637 66 + 46535552 aacaaccacaacgacaannnnnnnnnnaatatcatcaacaaTCGGAACGACTAATTGTGAAAGCCA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100614396 37 - 115148730 aaccaccacaac------------------------aacaagaaaaa-----aaaAGGGAAAGCAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80755973 30 + 95678458 caaaac------------------------------aacaacaa-aa-----aaaagggaaagcaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81182656 30 - 96509753 caaaac------------------------------aacaacaa-aA-----AAAAGGGAAAGCAA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76438719 31 + 90941950 caaaac------------------------------aacaacaacaa-----aaaagggaaagcaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18707883 30 + 33263144 caaaac------------------------------aacaacaa-aa-----aaaaGGGAAAGCAA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198411341 27 + 210400635 AA----------------------------------ACCAGTAACAG-----AAAAGGGAAGGTAA i calJac3.chr1 C 0 C 0 s mm10.chr15 77229185 30 + 104043685 -AGCAG------------------------------AATACCAAAAG-----AATAAGGATAGCAA i mm10.chr15 I 259 C 0 e canFam3.chr10 41020999 0 - 69331447 C a score=4165622.000000 s hg38.chr22_KI270876v1_alt 257265 1091 + 263666 ACAAAAGCACAATTAAAATTCACCT--TCACCCCATT---CCCCAGTTCCTCGATTTGCTGAGCCAAAACCATGCTGAGGAGACGTAAAGATCACAAGTTCCATTTCCG-CCAGCTCAGACTGTTCAGCGACCAGTGTTTCACGCTGATAAATGCCTCCCA-AATCTCAAAACGC-AAAGTGAGAGTTCACAAGGTTAGGCGCATTAATTAGCAGTACTCATTTGGATTCTGTATTCATCAAATACAACAAGCAGCTATTCAATATTTGCCTATTTGCAC-ACTCTAAGATCTCTAATTCAAAGATCCAACCAGAGTA---CAAATTAAAGCCCAAGAAAATAAACTAAAATAAACCTGTCACCATCAGAATGTGCCTCAAAGTAAATCAGCAGCTTTAAACCATGGCAAAGGG-TCTGTAACAGGCCTGCAGCAGAGACAGCATGAGTAATGAATGTGCAGGTTACAGAAGTGGGCCCCTACTGCAAAAGAAAGAA------------AAAGTAGGTACAATCAAAGAGACTACTTTTTTAGGCTTTAATAAATTCCTATTAACTCCTTTTGCTTAGCTCCTTATTGATCTATAATCCCCACAAGAAGA----------ATACAGTACCCTTTCAGT--CTTCTAAACTCAGT-AAGTCTATTTCCATAC-TTTACATCAATTAGCTTTACCTTCCTAAATCCACAATAAGC-----------------AACATTTTATAAATAATAAAGTAACTGCATTAGTTTGCAAGACTAGATTAAGAGACTAACCACGACC-----------------CCT------TTATTACATGTCCTAAGTGAAAAGTACAGGATGAAACAGAAACTGTCACTGCTTTTAAAGCAGCCCATAGGACTgtagttctcaac-cgcactacacagcagaatcacctttgg-gatttttaaacatttgaatgggtaagcccaatcttacacttacccaatcagaaactccgtggggtggatctccaggtatgag-aatgttttTCTGATATATGACTAAGATATAAAAGTACTATCAAA--GGCATAAGTTTCCCAGCTTAGAGAAGCTCTAGGACAGACACAAACCAGAATGAAAAAC-----AAATAAATCTTTA----CATTCTCTTTAGATTTAGGGTAAATGGCCCTATCTTT s panTro4.chr22 34637469 1091 + 49737984 acaaaagcacaattaaaaTTCACCT--TCACCCCATT---CCCCAGTTCCTCGATTTGCTGAGCCAAAACCATGCTGAGGAGATGTAAAGATCACAAGTTCCATTTCCG-CCAGCTCAGACTGTTCAGCGACCAGTGTTTCACGCTGATAAATGCCTCCCA-AATCTCAAAACAC-AAAGTGAGAGTTCACAAGGTTAGGCGCATTAATTAGCAGTACTCATTTGGATTCTGTATTCATCAAATACAACAAGCAGCTATTCAATATTTGCCTATTTGCAC-ACTCTAAGATCTCTAATTCAAAGATCCAACCAGAGTA---CAAATTAAAGCCCAAGAAAATAAACTAAAATAAACCTGTCACCATCAGAATGTGCCTCAAAGTAAATTAGCAGCTTTAAACCATGGCAAAGGG-TCTGTAACAGGCCTGCAGCAGAGACAGCATGAGTAATGAATGTGCAGGTTACAGAAGTGGGCCCCTACTGCAAAAGAAAGAA------------AAAGTAGGTACAATCAAAGAGACTACTTTTTTAGGCTTTAATAAATTCCTACTAACTCCTTTTGCTTAGCTCCTTATTGATCTGTAATCCCCACAAGAAGA----------ATACAGTACCCTTTCAGT--CTTCTAAACTCAGT-AAGTCTATTTCCATAC-TTTACATCAATTAGCTTTACCTTCCTAAATCCACAATAAGC-----------------AACATTTTATAAATAATAAAGTAACTGCATTAGTTTGCAAGACTAGATTAAGAGACTAACCACGACC-----------------CCT------TTATTACATGTCCTAAGTGAAAAGTACAGGATGAAACAGAAACTGTCACTGCTTTTAAAGCAGCCCATAGAACTgtagttctcaac-cgcactacacagcagaatcacctttgg-gatttttaaacatttgaatgggtaagcccaatcttacacttacccaatcagaaactccgtggggtggatctccaggtatgag-aatgttttTCTGATATATGACTAAGATATAAAAGTACTATTAAA--GGCATAAGTTTCCCAGCTTAGAGAAGCTCTAGGACAGACACAAACCAGAATGAAAAAC-----AAATAAATCTTTA----CATTCTCTTTAGATTTAGGGTAAATGGCCCTATCTTT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31057703 1094 + 46535552 ACAAAGTCTCTATTAAAATTCA-CT--TCACACCATT----CTCAGTTCGTCGATTAGTCGAGTC-AAACCAGGCTGAGGAGAGGTAAAGATCACAAGTTCCA-TACCG-CCAGCTCAGACTTTTCAGCGACCAGTGTGTCACACTGATAAATGCCTCCCACAATCTCAAAACAC-AAAGTGAGAGTTCACAAGGTTAAGCGCATTAATTAGCAGTACTCATTTGGATTCTGTATTCATCAAATACAACAAGCAGCTATTCAATATTTGCCTATTTGCAC-ACTCTAAGATCTCTAATTCAAAGATCCAACCAGAGTA---CAAATTAAAGCCCAAGAAAATAAACTAAAATAAACCTGTCACCAACAGAATGTGCCTCAAAGTAAATTAGCAGCTTTAAACCATGGCAAAGGG-TCTGTAACAGGCCTGCAGCACAGACAGCATGAGTAATGAATGTGCAGGTTACAGAAGTGGGCCCCTACTGCAAAAGAAAGAA------------AAAGTAGGTACAATCAAAGAGATTACTTTTTTAGGCTCTAATAAATTCCTATTAACTCCTTTTGCTTAGCTCCCTATTGATCTGTAATCCCCACAAGAAGA----------ATACAGTACCCTTTCAGT--CTTCTAAACTCAGT-AAGTCTATTTCCATAC-TTTACATCAATTAGCTTTACCTTCCTAAATCCAGAATAAGC-----------------AACATTTTATAAATAATAAAGTAACTGCATTAGTTTGCAAGACTAGATTAAGAGACTAACCATGACC-----------------CCT------TTATTACACGTCCTAGGTGAAAAGTACAGGATGAAACAGAAACTGTCACTGCTTTTAAAGCAGCCCATAGGACTGCAgttctcaat-cgcactacatagcagaatcacctttgg-gatttttaaacatttgaatgggtaagcccaatcttacacttacccaatcagaatctccgtggggtggatctccaggtatgag-aatgttttTCTGATACATGACTAAGATATAAAAGTACTATCAAA-GGGCATAAGTTTCCCAGCTTAGAGAAGCTCTAGGACAGACACAAACTAGAAAGAAAAACAAATAAAATAAATCTTTA----CATTCTCTTTAGATTTCGGGTAAATGGCCCTATCTTT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100614433 1094 - 115148730 ATAAAGGCACAATTAAAATTCACCT--TCACCCCATT---CCCCAGTTCCTTGATTTGCTGAGCCACAACCATGCTGAGGAGACGTAAAGATCACAAGTTCCATTTCCG-CCAGCTCAGACTCTTCAGCGACCAGTGTTTCACGCTGATAAATGCCTCCCA-AATCCCAAAACACAAAAGTGAGAGTTCACAAGGTTAGGCGCATTAATTAGCAGTACTCATTTGGATTCTGTATTCATCAAATACAACAAGCAGCTATTCAATATTTGCCTATTTGCAC-ACTCTAAGATCTCTAATTCAAAGATCCAACCAGAGTA---CAAATTAAAGCCCAAGAAAATAAACTAAAATAAACCTGTCACCATCAGAATGTGCCTCAAAGTAAATTAGCAGCTTTAAACCATGGCAAAGGG-TCTGTAACACGCCTGCGGCAGAGACAGCATGAGTAATGAATGTGCAGGTTACAGAAGTGGGCCCCTACTGCAAAAGAAAGAA------------AAAGTAGGTACAATCAAAGAGACTACTTTTTTAGGCTTTAATAAATTCCTATTAACTCCTTTTGCTTAGCTCCTTATTGATCTGTAATCCCCACAAGAAGA----------ATACAGTACACTTTCAGT--CTTCTAAACTTAGTAAAGTCTATTTCCATAC-TTTACATCAATTAGCTTTACCTTCCTAAATCCAGAATAAGC-----------------AACATTTTACAAATAATAAAGTAACTGCATTAGTTTGCAAGACTAGATTAAGAGACTAACCATGACC-----------------CCT------TTATTACATGTCCTAGGTGAAAAGCACAGGATGAAACAGAAACTGTCACTGCTTTTAAAGCAGCCCATAGGACTGCAgttctcaac-cgcactacatagcagaatcacctttgg-gatttttaaacatttgaatgggtaagcccaatcttacacttacccaatcagaatctctgtggggtggatctccaggtatgag-aatgttttTCTGATACATGACTAAGACATAAAAGTACTATCAAA-GGGCATAAGTTTCCCAGCTTAGAGAAGCTCTAGGACAGACACAAACCAGAAAGAAAAAC-----AAATAAATCTTTA----CATTCTCTTTAGATTTGGGGTAAATGGCCCTATCTTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80756003 1077 + 95678458 ataaaGGCACAATTAAAATTCACCT--TCACCCCATT---CCCCAGTTCCTTGATTTGCTGAGCCAAAACCACGCTGAGGAGACGTAAAGATCACAAGTTCCATTTCCG-CCAGCTCAGCCTGTTCAGCGACCAGTGTTTCATGCTGATAAATGCCTCCCA-AATCTCAAAACAC-AAAGTGAGAGTTCACAAGGTTAGGCGCATTAATTAGCAGTACTCATTTGGATTCTGTATTCATCAAATACAACAAGCAGCTATTCAATATTTGCCTATTTGCAC-ACTCTAAGATCTCTAATTCAAAGATCCAACCAGAGTA---CAAAATAAAGCCCATGAAAATAAACTAAAATAAACCTGTCACCATCAGAATGTGCCTCAAAGTAAATGAGCAGCTTTAAACCATGGCAAAGGG--CTGTAACAGGCCTGCAGCAGAGATGGCATGAGTAATGAATGTGCAGGTTACAGAAGTGGGCCCCTGCTGCAAAAGAAAGAA-------AAAATAAAGTAGGTACAATCAAAGAGACTACTTTTTTAGGCTTTAATAAATTCCTATTAACTCTTTTTGCTTAGCTCCTTATTGATCTGTAATCCCCAC---AAGA----------ATACAGTATCCTTTCAGT--CTTCTAAACTCAGA----------------C-TTTACATCAATTAGCTTTACCTTCCTAAATCCAGAATAAGC-----------------AACATTTTATAAATAATAAAGTAACTGCATTAGTTTGCAAGACTAGATTAAGAGACTAACCATGACC-----------------CCT------TTATTACATGTCCTAGGTGAAAAGTACAGGATGAAACAGAAACTGTCACTACCTCTAAAGCAGCCCATAGGACTGCAgttctcaag-cgcactacccagcagaatcacctttgg-gatttataaacatttgaatgggtaagcccaacctta-acttacccaatcagaatctccgtagggtggatctccaggtatgag-aattttttTCTGATATATGACTAAGATATAAAAGTACTATCAAA-GGGCATAAGTTTCCCAGCTTAGAGAAGCTCTAGCACAGACACAAAGCAGAAAGAAAAAC-----AAATAAATCTTTA----TATTCTCTTTAGATTTGGGATAAATGGCCCTATCTTT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81182686 1077 - 96509753 ATAAAGGCACAATTAAAATTCACCT--TCACCCCATT---CCCCAGTTCCTTGATTTGCTGAGCCAAAACCACGCTGAGGAGACGTAAAGATCACAAGTTCCATTTCCG-CCAGCTCAGCCTGTTCAGCGACCAGTGTTTCATGCTGATAAATGCCTCCCA-AATCTCAAAACAC-AAAGTGAGAGTTCACAAGGTTAGGCGCATTAATTAGCAGTACTCATTTGGATTCTGTATTCATCAAATACAACAAGCAGCTATTCAATATTTGCCTATTTGCAC-ACTCTAAGATCTCTAATTCAAAGATCCAACCAGAGTA---CAAAATAAAGCCCATGAAAATAAACTAAAATAAACCTGTCACCATCAGAATGTGCCTCAAAGTAAATGAGCAGCTTTAAACCATGGCAAAGGG--CTGTAACAGGCCTGCAGCAGAGATGGCATGAGTAATGAATGTGCAGGTTACAGAAGTGGGCCCCTGCTGCAAAAGAAAGAA-------AAAATAAAGTAGGTACAATCAAAGAGACTACTTTTTTAGGCTTTAATAAATTCCTATTAACTCTTTTTGCTTAGCTCCTTATTGATCTGTAATCCCCAC---AAGA----------ATACAGTACCCTTTCAGT--CTTCTAAACTCAGA----------------C-TTTACATCAATTAGCTTTACCTTCCTAAATCCAGAATAAGC-----------------AACATTTTATAAATAATAAAGTAACTGCATTAGTTTGCAAGACTAGATTAAGAGACTAACCATGACC-----------------CCT------TTATTACATGTCCTAGGTGAAAAGTACAGGATGAAACAGAAACTGTCACTACCTCTAAAGCAGCCCATAGGACTgcagttctcaag-cgcactacccagcagaatcacctttgg-gatttataaacatttgaatgggtaagcccaacctta-acttacccaatcagaatctccgtagggtggatctccaggtatgag-aattttttTCTGATATATGACTAAGATATAAAAGTACTATCAAA-GGGCATAAGTTTCCCAGCTTAGAGAAGCTCTAGCACAGACACAAAGCAGAAAGAAAAAC-----AAATAAATCTTTA----TATTCTCTTTAGATTTGGGATAAATGGCCCTATCTTT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76438750 1077 + 90941950 ataaaggcacaattaaaaTTCACCT--TCACCCCATT---CCCCAGTTCCTTGATTTGCTGAGCCAAAACCACACTGAGGAGACACAAAGATCACAAGTTCCATTTCCG-CCAGCTCAGCCTGTTCAGCGACCAGTGTTTCATGCTGATAAATGCCTCCCA-AATCTCAAAACAC-AAAGTGAGAGTTCACAAGGTTAGGCGCATTAATTAGCAGTACTCATTTGGATTCTGTATTCATCAAATACAACAAGCAGCTATTCAATATTTGCCTATTTGCAC-ACTCTAAGATCTCTAATTCAAAGATCCAACCAGAGTA---CAAAATAAAGCccatgaaaataaactaaaataaacctGTCACCATCAGAATGTGCCTCAAAGTAAATGAGCAGCTTTAAACCATGGCAAAGGG--CTGTAACAGGCCTGCAGCAGAGATGGCATGAGTAATGAATGTGCAGGTTACAGAAGTGGGCCCCTgctgcaaaagaaagaa-------aaaataaagtaggtaCAATCAAAGAGACTACTTTTTTAGGCTTTAATAAATTCCTATTAACTCTTTTTGCTTAGCTCCTTATTGATCTGTAATCCCCAC---AAGA----------ATACAGTACCCTTTCAGT--CTTCTAAACTCAGA----------------C-TTTACATCAATTAGCTTTACCTTCCTAAATCCAGAATAagc-----------------aacattttataaataataaagtaactgCATTAGTTTGCAAGACTAGATTAAGAGACTAACCATGACC-----------------CCT------TTATTACATGTCCTAGGTGAAAAGTACAGGATGAAACAGAAACTGTCACTACCTCTAAAGCAGCCCATAGGACTGCAGTTCTCAAG-CGCACTACACAGCAGAATCACCTTTGG-GATTTATAAACATTTGAATGGGTAAGCCCAACCTTA-ACTTACCCAATCAGAATCTCCGTAGGGTGGATCTCCAGGTATGAG-AATTTTGTTCTGAAATATGACTAAGACATAAAAGTACTATCAAA-GGGCATAAGTTTCCCAGCTTAGAGAAGCTCTAGCACAGacacaaagcagaaagaaaaac-----aaataaatctttA----TATTCTCTTTAGATTTGGGATAAATGGCCCTATCTTT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18707913 1074 + 33263144 ATAAAGGCACAATTAAAATTCACCT--TCACCCCATT---CCCCAGTTCCTTGATTTGCTGAGCCAAAACCATGCTGAGGAGACGTAAAGATCACAAGTTCCATTTCCG-CCAGCTCAGCCTGTTCAGCGACCAGTGTTTCATGCTGATAAATGCCTCCCA-AATCTCAAAACAC-AAAGTGAGAGTTCACAAGGTTAGGCGCATTAATTAGCAGTACTCATTTGGATTCTGTATTCATCAAATACAACAAGCAGCTATTCAATATTTGCCTATTTGCAC-ACTCTAAGATCTCTAATTCAAAGATCCAACCAGAGTA---CAAAATAAAGCCCATGAAAATAAACTAAAATAAACCTGTCACCATCAGAATGTGCCTCAAAGTAAATGAGCAGCTTTAAACCATGGCAAAGGG--CTGTAACAGGCCTGCAGCAGAGATGGCATGAGTAATGAATGTGCAGGTTACAGAAGTGGGCCCCTGCTGCAAAAGAAAGAA-------AAAATAAACTAGGTACAATCAAAGAGACTACTTTTTTAGGCTTTAATAAATTCCTATTAACTCTTTTTGCTTAGCTCCTTATTGATCTGTAATCCCCAC---AAGA----------ATACAGTACCCTTTCAGT--CTTCTAAACTCAGA----------------C-TTTACATCAATTAGCTTTACCTTCCTAAATCCAGAATAAGC-----------------AACATTTTATAAATAATAAAGTAACTGCATTAGTTTGCAAGACTAGATTAAGAGACTAACCATGACC-----------------CCT------TTATTACATGTCCTAGGTGAAAAGTACAGGATGAAACAGAAACTGTCACTACCTCTAAAGCAGCCCATAGGACTGCAgttctcaag-cgcactacacagcagaatcacctttgg-gatttataaatatttgaatgggtaagcccaacctta-acttacccaatcagaatctccgtagggtggatctccaggtatgag-aattttttTCTGATATATGACTAAGATATAAAAGTACTATCAAAGGGGCATAAGTTTCCCAGCTTACAGAAGCTCTAGCACAGACACAAAGCAGAAAGAAAAAA-----AAATAAATCTTTA----TATTCTCTTTAGATTTGGGATAAATGGC----TCTTT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198411368 1104 + 210400635 ATAAACTCACAATTAAAATTCACCA--TAACCCCATT---CCCCAGTTCCTTGATTTGCTGAGCTAAAACCATGCTGAGGAGATATAAAGATCACAAGTTCTGTTTCCA-CCAGCTCAGACTGTTCAGCGACCAGTGTTTTACGCTGATAAATGCCTCCCA-AATCTCAAAACAC-AAAGTGAGAGTTCACAAGGTTAGGCACATTAATTAGCAGCACTCATTTGGATTCTGTATTCATCAAGTACAACAAGCAGCTATTCAATATTTGCCTATTTGCACTATTCTAACATCTCTAATTCAAAGATCCAACCACAGTA---CAAAATAAAGCCCAAGAAAATAAACTAAAATAAGCCTGTCACCATTAGAATGTGCCTCAAAGTAAATTAGCAGCTTTAAATCATGGCAAAGGG-TCTCCAACAGGCCTGCAGCAGAGATAGCATTAGTAATGAATGTGCAGGTTACAGAAGTGGGCCCCTGCTGCAAAAGAAAGAA------AAAAATTAAGTAGGTACAAAGAAAGAGACTACTTTTTTAGGCTTCAATAAATTCCTATTAACTCCTTTTGCTTAGCTCCTTATTGATCTGTAATCCACACAGGAAGAACACAGCATTATACAGTACCCTTTCAGT--CTTTTAAACTCCATTAAGTCTATTTCCATAC-TTTACATCAATTAGC-TTACCTTCCTAGATCCAGAATAAGC-----------------AACattttataaaaaataaaataaCTGCATTAGTTTGCAAGCCTAGATTAAGAGACTAACCATGATC-----------------CCT------TTATTACATGTCCTAGGTGAAAAGTACAGGATGAAACAGAAACTGCCACTGCTTTTAAAGCAGCCCATAGGACTgcagttatcaac-caca-tacatagcagaatcaactttgg-ggtttaaaaatatttgaatgggtaagcgcaatcttacacccacccaattagaatctctttggggga----ttcaggtctgag-aattttttTCTGATACATGACTAAGATATAAAAGTACTATCAAA-GGGCATAAGTTTCCCAGCATATAGAAGCTCTAGGACAGACACAAACCAGAAAGAAAAAT-----AAATAAATCATTA----TATTCTCTTTAGATTTGGGGTAAATGGCCCTATCTAT i calJac3.chr1 C 0 C 0 s mm10.chr15 77229215 1066 + 104043685 ATAAAGACACAATTAAAATTCACCTCACTACCCTACCCAACCTCAGCTCCTGGATTTGCTGAGACAAAACCACACTTGGGAGCTGTAAAGATCACAAGTTCAGTTCCTGCCCAGCACA--------AGTGACCACTGTTTCGCACTGATCAGTGCCTCCCA-AATCACAAGGCAC-CGAGTGGGAGTTCACAGGGTTAGATGTATTAATTAGCAGCACTTATTTGGATTCTGTATCCATCGAGTACAACAAGCAGCTATTTGATATTTGCGTATTTACACTCTTCTAAGATCCCTAATTCAAAGACCCAGCCAGAGAAAATAAAGACAAAGCCTAAGAAAATAAACGGAAATAAACCTTTCACCACTGGAATGAGCCTCAAGTAAAGCCAGCAGCGTTGCCCCACAGCAAAGGG-TCTGCACCA-GTCTCTAGCACAG-CAGCACAAGTAA------CACAGACCAGGGA---GAGATCCTA---CAAAGAAGAGCATTGCAGGAGTGTGGGGCAGACACTGCTGAGG-------------GAGCTCTAACACAGTCTCACCAAGTC----TGCTTAGCTCCTCACTGATCTGCAGTCCTCACAGAAACA---CAAAACTGGACAGTATTCCTCAGAG--CCTTGAAATTCAGA--ATTTTATTTCCCTACAAATGCATCAATAAACCTGCCAT--CTAATCCTCAGAGAGGC-------------------CATTTTATAAATAATGAACTATGTGCATTACTATATAAGATTAAATT---AGATTGAATATAATC-----------------TCCTATATGTTAGTTAACACCCTGGGTGAAGAGCAAAGGGTGACAA-------GTC-CTTCTTATAAAGCAGCCCTTAACAATA-AGTTCTCA-----CTCTGCATGACAGAACCACCCACAG-GGATGTTTAACATTAGAACTGCTACACCCAATCTGCAGCTGACTCAGTTGGAATCTATA-GGGGCTCATCTCCAGGCACCAGCACTTTCTTTCTGATGTATGGCCAAGATACAGA---ACTGTCAAA-GGTCATAAATACCACAGCCAGTAGAAACTCCAGGGCAGGGCTACACTAAAAAGAAAAAC-----ACACACGTCACTA---CCATTCTCTTTAGATTTAGGGCCAGTGACCCTATCTTT i mm10.chr15 C 0 I 388 s canFam3.chr10 41020999 1136 - 69331447 ACAAAAACACAATAAAAATTCACCT--TTACCTTATC---CCCCTGCTCCTGGATTTGCTGAACC-AAACTGCTCTGGGGAGATGTAAAGATCACAAGTTCAATTTCTGCCCACCTCAGGCTGCTCGGTGACCAGTGTTGCACACTGATAAATGCCTCCCA-AACCTCAGCGCAC-AAAGTGAGAGTTCACAAGGTTAGGCGCATTAATTAGCAGTACTCATTTGGATTCTGTATTCATCAAATACAACAAGCAGCTATTCAATATTTGCCTGTTTGCACTGCTCTAAGATCTCTGATTCAAAGATCCAGTCGGAGAA---CAAAATAAAGCCCAAGAAAATAAACTAATATAAGCCTGTCACCATCAGAATGTGCCTCAAAGTAAATTAGCAGCTTTAAACTATGGCAAAAGGGTCTGCA-TAGACCTACAGCAGAGAGAGTATAAGTAATGAAGGTGCAGGTTACAGAAGTGGGTCCCTACCACAAGAGAAAGGA-------AAGATAAAGCAGTTCCAAGCAACAAGAGGACTTTTGT--GCTTTAACAAATTCCTCTTAATTCCTTTTGCTTAGTTTCTTATTGATCTGCAATCCCTCCAGGAAGAACTCAGCATTATACAGTAC-CTTCCAGTTCCTTTTAAACTCAGT-ACGTCTGTTCCCATAC-TTT-----AATTAGTTTTACCTTCCTATATCTAAAATAAGCCTATATCCCAAATAAGCAACATTTTATAAATAAGTAAACATATGCATTGGTATGCAAAACTAAAT--AGAGAT--GCCATGATCTTTTATGTTTTAAGGATCCT------TTAGGTTTTATCTTTATGTTAAAGAACAGGATGAAACAGAAAATGTCACTCTTTTTAAAGTAGCCCATAAGACTGCAgttctccactctggctataaaacagcatcacctatagagatttctaaatatgtgaatgattaaacccaatcttagacttattcaatcagaacctctagaggctgaatctccagaaaatag-tac-ttttCCTGATATATGGCCACGATATAGAATTAATATCAAA-GGGCATAAATTTTACAGCTT-CAAAAGGTCTAGAGCAGACCCAAACCAGAAAGAAAAAA-----AAAAATATCCTCTATATTATTCTCTTTAGGTTTGAAGTAAATGACCATATCTTT i canFam3.chr10 C 0 C 0 a score=642707.000000 s hg38.chr22_KI270876v1_alt 258356 188 + 263666 TACCAAAAGCTTCCAT---------CTTCAATATCAACAGTGATGAACTCAGTAGGGGATGAACACAGAG-CTAACAACACT----------TCTTCTCCCGATGCCTTATCTGGGGCCACTCTGATATCAACTCAGCACCAAAAGTGCAAGAATTGGACAAA-TACTCTCAAATCTGAAAGGCCTGCAAATAGGTGACTATTGATTAT s panTro4.chr22 34638560 188 + 49737984 TACCAAAAGCTTCCAT---------CTTCAATATTAACAGTGATGAACTCAGTGGGGGATGAACACAGAG-CTAACAACACT----------TCTTCTCCCGATGCCTTATCTGGGGCCACTCTGATATCAACTCAGCACCAAAAGTGCAAGAATTGGACAAA-TACTCTCAAATCTGAAAGGCCTGCAAATAGGTGACTATTGATTAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31058797 188 + 46535552 TACCAAAAGCTTCCAT---------CTTCAATATCAACAGTGATGAACTCAGTGGGGGATGAACACAGAG-CTAACAACACT----------TCTTCTCTCCAGGCCTTATCTGGGGCCACTCTGACATCAACCCAGCACCAAAAGTGCAAGAATTGGACAAA-TACTCTCAAATCTGAAAGGCCTGCAAATAGGTGACTACTGATTAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100615527 188 - 115148730 TACCAAAAGCTTCCAT---------CTTCAATATCAACAGTGATGAACTCAGTGGGGGATGAACACAGAG-CTAACAACACT----------TCTTCTCTCCATGCCTTATCTGGGGCCACTCTGACATCAACTCAGCACCAAAAGTGCAAGAATTGGACAAA-TACTCTCAAATCTGAAAGGCCTACAAATAGGTGACTATTGATTAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80757080 189 + 95678458 TACCAAAAGCTTTCAT---------CTTCAATATCAACAGTGATGAACTCAGTGGGGGATGAACACAGAG-ATAACAACACT----------TCTTCTCTCCATGCCCTATCTGGGGCCAATCTGACATCAACTCAGCACGAAAAGTGCAAGAATTGGACAAATTACTCTCAAATCTGAAAGGCCTGCAAACAGGTGACTACTGATTAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81183763 189 - 96509753 TACCAAAAGCTTTCAT---------CTTCAATATCAACAGTGATGAACTCAGTGGGGGATGAACACAGAG-ATAACAACACT----------TCTTCTCTCCATGCCCTATCTGGGGCCAATCTGACATCAACTCAGCACCAAAAGTGCAAGAACTGGACAAATTACTCTCAAATCTGAAAGGCCTGCAAACAGGTGACTACTGATTAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76439827 188 + 90941950 TACCAAAAGCTTTCAT---------CTTCAATATCAACAGTGATGAACTCAGTGGGGGATGAACACAGAG-ATAACAACACT----------TCTTCTCTCCATGCCCTATCTGGGGCCAATCTGACATCAACTCAGCACCAAAAGTGCAAGAATTGGACAAA-TACTCTCAAATCTGAAAGGCCTGCAAACAGGTGACTACTGATTAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18708987 188 + 33263144 TACCAAAAGCTTTCAT---------CTTCAATATCAACAGTGATGAACTCAGTGGGGGATGAACACAGAG-ATAACAACACT----------TCTTCTCTCCATGCCCTATCTGGGGCCAATCTGACATCAACTGAGCACCAAAAGTGCAAGAATTGGACAAA-TACTCTCAAATCTGAAAGGCCTGCAAACAGGTGACTACTGATTAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198412472 185 + 210400635 TACCAAAAGCTTCCAT---------CTTCAATTTTAACAGTGATGAACTCAATGGGAGATGAACACAGAG-ACAACAACACT----------TCTT---TCCATGCCCTATCTGGGGCCACTCTGACATCAACTCAGCACCACAAGAGTAAGAATTGGACGCA-CACTCTCAAATCTGAAAGGCCTCCAAACAAGTGACTATTGATTAT i calJac3.chr1 C 0 C 0 s canFam3.chr10 41022135 189 - 69331447 TAACAAAAGTTTCCATAAGAACAAACTTCAATTCCGACAGTGATGATCCCCCTGGGAGATGAACACCAAGAACAACAACACTCTCCCTCGTCCTTTTTCTCCATACCCCACCTGGGGCCGATGTGATGCCAAACCAGCACCAAAAGTACAAGAACTGAGCATA-TATT-------------------CAAATAGATGACCACTAATTAT i canFam3.chr10 C 0 I 2 e mm10.chr15 77230281 388 + 104043685 I a score=983851.000000 s hg38.chr22_KI270876v1_alt 258544 342 + 263666 CAACCATCCTAGTTTTTG-TTTTTTTGTAGTTGTTGtttttgtttgttttatgttttgtttttgagacaaagtctcgctctatcactcaggctggaatgcaatggtgtagtctcagctcactgcaacctctacctccccagttc--aagcaattctcctgcctcagcctcccgagtagccaggactacaactgcataccatcacacccagctaatttttgtatttttagtagagccggggtttcactatgttggccaggctggtctcaaactcctgacctcatgatccacccaccttggcctcccaaagtactgggattacaggcatgagccaccgcacccagcc s panTro4.chr22 34638748 343 + 49737984 CAACCATCCTAGTTTTTGTTTTTTTTGTAGTTGTTGtttttgtttgttttatgttttgtttttgagacaaagtctcgctctatcactcaggctggaatgcaatggtgtagtctcagctcactgcaacctctacctccccagttc--aagcaattctcctgcctcagcctcccgagtagccaggactacaactgcgtaccaccacaaccagctaatttttgtatttttagtagagccggggtttcactatgttggccaggctggtctcaaactcctgacctcatgatccacccaccttggcctcccaaagtactgggattacaggcatgagccaccgcacccagcc i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31058985 343 + 46535552 CAACCATCCTAGTTTTTGTTTTTTTTGTAGTTGTTGtttttgtttgttttatgttttgtttttgagacaaagtcttgctctgtcactcaggctggaatgcaatggtgcggtctcagctcactgcaacatctacctccccagttc--aagcaattctcctgcctcagcctcccgagtagccaggactacaggtgcgtaccaccacactcagctaatttttgtatttttagtagagatggggtttcactatgttggccaggctggcctcaaactcctgacctcatgatccacccaccttggcctcccaaagtgctgggattacaggcatgagccaccacacccagcc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100615715 342 - 115148730 CAACCATCCTAgtttttg-tttttttgtagttgttgtttttgtttggtttatgttttgtttttgagacaaagcctcaccctgtcactcaggctggaatgcaatggtgcggtctcagctcactgcaacctctacctccccagttc--aagcaattctcctgcctcagcctcctgagtagccaggactacagatgtgtaccaccacacccagctaatttttgtatttttagtagagacggggtttcactatgttggccaggctggtctcgaactcctgacctcatgatccacccaccttggcctcccaaagtgctgggattacaggcatgagccaccgcacccagcc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80757269 341 + 95678458 CAACTATCCTAGTTTCTG-TTTTCTTGTAGTTGTTG-ttttgtttgttttttgttttgtttttgagacaaagtctcactctgtcactcaggctagaatgcaatggcgcagtctcagctcactgcaacctccacctccccagttc--aagcaattctcctgccttagcctcccaagtagccaggactacaggtgcgcaccaccacgactggctaatttttgtatttttagtagagacggggtttcactatgttggccaggctggtctcgaactcctgacctcatgatccacccaccttggccttccaaagtgctgggattacaggtgtgagccactgcacccagcc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81183952 341 - 96509753 CAACTATCCTAGTTTCTG-TTTTCTTGTAGTTGTTG-ttttgtttgttttttgttttgtttttgagacaaagtctcactctgtcactcaggctagaatgcaatggcgcagtctcagctcactgcaacctccacctccccagttc--aagcaattctcctgccttagcctcccaagtagccaggactacaggtgcgcaccaccacgactggctaatttttgtatttttagtagagacggggtttcactatgttggccaggctggtctcgaactcctgacctcatgatccacccaccttggccttccaaagtgctgggattacaggtgtgagccactgcacccagcc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76440015 341 + 90941950 CAACCATCCTAgtttgtg-ttttcttgtagttgttg-ttttgtttgttttttgttttgtttttgagacaaagtctcactctgtcactcaggctagaatgcaatggcacagtctcagctcactgcaacctccgcctccccagttc--aagcaattctcctgccttagcctcccaagtagccaggactacaggtgcgcaccaccacgactggctaatttttgtatttttagtagagacggggtttcactatgttggccaggctggtctcgaactcctgacctcatgatccacccaccttggcctcccaaagtgctgggattacaggtgtgagccaccgcacctagcc i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18709175 341 + 33263144 CAACTAACCTAGTTTCTG-TTTTCTTGTAGTTGTTG-ttttgtttgttttttgttttgtttttgagacaaagtctcactctgtcactcaggctagaatgcaatggcgcagtctcagctcactgcaacctccgcctccccagttc--aagcaattctcctgccttagcctcccaagtagccaggactacaggtgcgcaccaccacaactggctaatttttgtatttttagtagagacggggtttcactatgttggccaggctagtctcgaactcctgacctcatgatccacccaccttggcctcccaaagtgctgggattacaggtgtgagccaccgcacccagcc i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198412657 311 + 210400635 A--------------TTG-AT----------------TATTGGCCATCCTATGTGttttttttgagaccgagtctcgctctgtcactcaggctggagtgcagtggcgcggtctcaactcactgcaacctccacctcccaggttcaaaagcaattctcctgcctcagcctcctgagcagctgggattacaggtgtgtgc---cacaactggccaatttttgtacttttagcagagatggggtttcactatgttggccaggctggtctcgaactcctgaccttgtgatccaccctctttggcctcccaaagagctgggattacaggcatgagccatcgcacccagcc i calJac3.chr1 C 0 C 0 e mm10.chr15 77230281 388 + 104043685 I e canFam3.chr10 41022324 2 - 69331447 I a score=723573.000000 s hg38.chr22_KI270876v1_alt 258886 210 + 263666 GACCATCCTAGTTTT---TAAGATCCACTTCAGGAGCTCTGATGAGATTCAATGAACTTCTGGAAAGGACACTATG----AACTCTTTCGTTTAGCACT---GTAACTCATATCTCCTGGACAAGTATAACAATGGTAGC-TTTTTTT--GACAACCCTGTAAGGAA----TAATGGCATTCC-------------AAGATATTTCTAGGAGCTACCCTTTCAAATCTCCTGAAGAACGT s panTro4.chr22 34639091 210 + 49737984 GACCATCCTAGTTTT---TAAGATCCACTTCAGGAGCTCTGATGAGATTCAATGAACTTCTGGAAAGGACACTATG----AACTCTTTCGTTTAGCACT---ATAACTCACATCCCCTGGACAAGTATAACAATGGTAGC-TTTTTTT--GACAACCCTGTAAGGAA----TAATGGCATTCC-------------AAGATATTTCTAGGAGCTACCCTTTCAAATCTCCTGAAGAACGT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31059328 210 + 46535552 GACCATCCTAGTTTT---TAAGATCCACTTCAGGAGCTCTGATGAGATTCAATGAACTTCTGGAAAGAACACTATG----AACTCTTTCGTTTAGCACT---ATAACTCATATCCCTTGGACAAGTATAACAATGGTAGC-TTTTTTT--GACAACCCTGTAAGGAA----TAATGGCATTCC-------------AAAATATTTCTAGGAGCTACCCTTTCAAATCTCCTGAAGAACGT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100616057 208 - 115148730 AACCATCCTAGTTTT---TAAGATCCGCTTCAGGAGCTCTGATGAGATTCAATGAACTTCTGGAAAGGACACTATG----AACTC--TCATTTAGCACT---ATAACTCATATCCCTTGGACAAGTATAACAATGGTAAC-TTTTTTT--GACAACCCTGTAAGGAA----TAACGGCATTCC-------------AAGATATTTCTAGGAGCTACCCTTTCAAATCTCCTGAAGAACGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80757610 212 + 95678458 GACCATCCTAGTTTT---TAAGATCCGCTTCAGGAGCTCTGATGAGATTCAGTGAACTTCTGGAAAGGACACTATG----AACTCTTTCGTTTAGCACT---ATAACTCATATCCCTTGGACAAGTAGAACAATGGTAGC-TTTTTTTTGGACAACCCTGTAAGGAA----TAATGGCATTCC-------------AAGATATTTCTAGGAGCTACCCTTTCAAATCTCCTGAAGAACGT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81184293 212 - 96509753 GACCATCCTAGTTTT---TAAGATCCGCTTCAGGAGCTCTGATGAGATTCAGTGAACTTCTGGAAAGGACACTATG----AACTCTTTCGTTTAGCACT---ATAACTCATATCCCTTGGACAAGTAGAACAATGGTAGC-TTTTTTTTGGACAACCCTGTAAGGAA----TAATGGCATTCC-------------AAGATATTTCTAGGAGCTACCCTTTCAAATCTCCTGAAGAACGT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76440356 212 + 90941950 gaCCATCCTAGTTTT---TAAGATCCGCTTCAGGAGCTCTGATGAGATTCAGTGAACTTCTGGAAAGGACACTATG----AACTCTTTCGTTTAGCACT---ATAACTCATATCCCTTGGACAAGTAGAACAATGGTAGC-ttttttttGGACAACCCTGTAAGGAA----TAATGGCATTCC-------------AAGATATTTCTAGGAGCTACCCTTTCAAATCTCCTGAAGAACGT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18709516 213 + 33263144 GACCATCCTAGTTTT---TAAGATCCGCTTCAGGAGCTCTGATGAGATTCAGTGAACTTCTGGAAAGGACACTATG----AACTCTTTCATTTAGCACT---GTAACTCATATCCCTTGGACAAGTAGAACAATGGTAGCTTTTTTTTTTGACAACCCTGTAAGGAA----TAATGGCATTCC-------------AAGATATTTCTAGGAGCTACCCTTTCAAATCTCCTGAAGAATGT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198412968 219 + 210400635 GACCATCCTGTCTTT---TAAGATCAGCTTCAGGAGCTCTGATGAGATTCAATGAACTTCTGGAAAGGACACTATGAACTAACTCTTTCATTTAGCACT---ATAACTCATATCCGTTGGGCAAG--------CGGTAAC-TTTTTTT--AACAACCCTGTAAGGAA----TAATGATATTTCTAGGAGAATATCAAAGATAGTGCTAGAAGCTACCCTTTCAAATCTCCTGAAGAACGT i calJac3.chr1 C 0 C 0 s canFam3.chr10 41022326 220 - 69331447 GACTATCCTAGTTGTTAATAAGATCAGCTGCAGGGGTTCTGATGAGATTCAAGTAATTTCTGGAAAGAACTATGTC----AACCCCTCTATTTAGCACTCCAATGATACATGTCCTTTGGACGAGCCTAATAATAGGGGC-TTTTTTG--GACAATTCTATGGGGAAGTTGGATAGGTATTCA-------------AAGATATTGCTATGAGCTATCCTTTCAAATCTCCTGAAAAATAT i canFam3.chr10 I 2 I 1 e mm10.chr15 77230281 388 + 104043685 I a score=3600.000000 s hg38.chr22_KI270876v1_alt 259096 1 + 263666 C s panTro4.chr22 34639301 1 + 49737984 C i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31059538 1 + 46535552 C i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100616265 1 - 115148730 C i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80757822 1 + 95678458 C i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81184505 1 - 96509753 C i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76440568 1 + 90941950 C i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18709729 1 + 33263144 C i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198413187 1 + 210400635 C i calJac3.chr1 C 0 C 0 e mm10.chr15 77230281 388 + 104043685 I e canFam3.chr10 41022546 1 - 69331447 I a score=620762.000000 s hg38.chr22_KI270876v1_alt 259097 179 + 263666 AATATCCCCAAACATCAAAGATACAAATTTCTTTCAGAGGCGAGGTGATTTAAGCCACACCATTTCTCTAAGAGGAAGCCTTACCT-GTTCTTCTATCCTAACTCTGTTTCAACGTCATGGGCTCAAGTATTCAAACAACAAAAAGATAGGGAAGGCATTTTACACACTTGCCTAAACCA s panTro4.chr22 34639302 179 + 49737984 AATATCCCCAAACATCAAAGATACAAATTTCTTTCAGAGGCGAGGTGATTTAAGCCACACCATTTCTCTAAGAGGAAGCCTTACCT-GTTCTTCTATCCTCACTCTGTTTCAACGTCATGGGCTCAAGTATTCAAACAACAAAAAGATAGGGAAGGCATTTTACACACTTGCCTAAACCA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31059539 180 + 46535552 AATATCCCCAAACATCAAAGATAGAAATTTCTTTCAGAGGCGAGGTGATTTAAGCCACACCATTTCTCTAAGAGGAAGCCTTACCTGGTTCTTCTAACCTAACTCTGCTTCAACGTCATGCGCTCAGGTATTCAAACAACAAAAAGATAGGGAAGGCATTTTATACACTTGCCTAAACCA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100616266 179 - 115148730 AATATCCCCAAACATCAAAGATACAAATTTCTTTCAGAGGCAAGGTGATTTAAGCCACACCATTTCTCTAAGAGGAAGCCTTACCT-GTTCTTCTATCCTAACTCTGCTTCAACATCATGTGCTCGAGTATTCAAACAACAAAAAGATAGGGAAGGCATGTTATACACTTGCCTAAACCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80757823 179 + 95678458 AATATCTCCAAACAGCAAGGAGACAAATTTCTTTTGGAGGCAAGGTGATTTAAGCCACACCATTTCTCTAAGAGGAAGCCTTACCT-GTTCTTCTATCCTAGCTCTGCTTCAACGTCATGTGCTCAAGTCTTCAAACAGCAAAAAGATAGGGAAGGCATTTTATACACTTGCCTAAACCA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81184506 179 - 96509753 AATATCTCCAAACAGCAAGGAGACAAATTTCTTTTGGAGGCAAGGTGATTTAAGCCACACCATTTCTCTAAGAGGAAGCCTTACCT-GTTCTTCTATCCTAGCTCTGCTTCAACGTCATGTGCTCAAGTCTTCAAACAGCAAAAAGATAGGGAAGGCATTTTATACACTTGCCTAAACCA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76440569 179 + 90941950 AATATCTCCAAACAGCAAGGAGACAAATTTATTTTGGAGGCAAGGTGATTTAAGTCACACCATTTCTCTAAGAGGAAGCCTTACCT-GTTCTTCTATCCTAGCTCTGCTTCAACGTCATGTGCTCAAGTCTTCAAACAGCAAAAAGATAGGGAAGGCATTTTATACACTTGCCTAAACCA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18709730 179 + 33263144 AATATCTCCAAACAGCAAGGAGACAAATTTCTTTTGGAGGCAAGGTGATTTAAGCCACGCCATTTCTCTAAGAGGAAGCCTTACCT-GTTCTTCTATCCTAGCTCTGCTTCAACGTCATCTGCTCAAGTCTTCAAACAGCAAAAAGATAGAGAAGGCATTTTATACACTTGCCTAAACCA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198413188 178 + 210400635 AATATCCCCAAACAGCAAGGAGACAAATTTCTTTCAGAGGCGAGGTGATTTAAGCCACACCATTTCTCGGAGAGGAAGTGTTACCC-GTTCTTCTACCCTAACTCTTCTTCAAGGCCATGTGCTCAGGTCTTCAAACACCAGAAACATAGGGAAGGCAC-TTATACACTTGCCTAAACCA i calJac3.chr1 C 0 C 0 s canFam3.chr10 41022547 173 - 69331447 AATACTCCCAAACAGCAAGGAGGCAAATTTC----AGAGGGTAGGTATCTTAAGCCACATCATTCCTCT--GAGGCAGCTTTACCT-GTTCTTCTAACCTAACTCGGCTTCAGCCTCATCTGCTCAAGGTTTCTAATAGCAAAAGGAAAGGGAAGGCATTTTATACACTCACCTAAAGCA i canFam3.chr10 I 1 C 0 e mm10.chr15 77230281 388 + 104043685 I a score=1119365.000000 s hg38.chr22_KI270876v1_alt 259276 266 + 263666 TACTGAGGGTG-----TCTCGTAGGAAGCAATTCTGCTCTGACCCATAATAGGGCCTGGGC--TTTTCCAGTCATCCTCCC-ATCTAACAAAGAAAGGTGGCAGAAACTTTGCTTTCTCAGGCAAG----CTTTCCCTGATTAAAACCATAAGGCTGA-ATTCCCCCAGGGAGGAGAATGGAATTTTCTTGCTACAGATCATTACAAGGACTCAA--------AAACTCTGTGCAGGCA--GGGGCTAACTGGCAGGTAATAAAGAGACAAGTCCAGCATTCAGAATTA s panTro4.chr22 34639481 264 + 49737984 TACTGAGGGTG-----TCTCGTAGGAAGCAATTCTGCTCTGACCCATAATAGGGCCTGGGC--TTTTCCAGTCATCCTCCC-ATCTAACAAAGAAAGGTGGCAGAAACTTTGCTTTCTCAGGCAAG----CTTTCCCTGATTAAAACCATAAGGCTGA-ATTCCCCCAGGGAGGAGAATGGAATTTTCTTGCTACAGATCATTACAAGGACTCAA--------AAACTCTGTGCAGGCA--GGGGCTAACTGGCAGGTAAT--AGAGACAAGTCCAGCATTCAGAATTA i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31059719 266 + 46535552 TACTGAGGGTG-----TCTCGTAGGAAGCAGTTCTGCTCTGACCCATAATAGGGCCTGGGC--TTTTCCAGTCATCCTCCC-ATCTAACAAAGAAAGGCGGCAGAAACTTCGCTTTCTCAAGCAAG----CTTTCCCTGATTAAAACCATAAGGCTGA-ATTACCTCAGGGAGGAGAATGGAATTTTCTTGCTACAGATCATTACAAGGACTCAA--------AAACTCTGTGCAGGCA--GGGGCTAACTGGCAGGTAATAAAGAGACAAGTCCAGCATTCAGAATTA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100616445 266 - 115148730 TACTGAGGGTG-----TCTCATAGGAAGCAATTCTGCTCTGACCCATAATAGGGCCTGGGC--TTTTCCAGTCATCCTCCC-ATCTAACAAAGAAAGGCAGCAGAAACTTTGCTTTCTCAAGCAAG----CTTTCCCTGATTAAAACCATAAGGCTGA-ATTCCCCCAGGGAGGAGAATGGAATTTTCTTGCTACAGATCATTACAAGGACTCAA--------AAACTCTGTGCAGGCA--GGGGCTAACTGGCAGGTAATAAAGAGACAAGTCCAGCATTCAGAATTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80758002 266 + 95678458 TACTGAGGGTG-----GCTCGTAGGAAGCAGTTCTGCTCTGACCCATAATAGGGCCTGGGC--TTTTCCAGTCATCCTCCC-ATCTAACAAAGAAAGGCGGCAGAAACTTCGCTTTCTCAAGCAAG----CCTTCCCTGATTAAAACCATAAGGCTGA-ATTCCCCCAGGGAGGAGAATGGAATTTTCTTGCTACAGATCATTACAAGGACTCAA--------AAACTCTGTGCGGGCA--GGGGCTAACTGGCAGGTAATAAAGAGACAAGTCCAGCATTCAGAATTA i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81184685 266 - 96509753 TACTGAGGGTG-----GCTCGTAGGAAGCAGTTCTGCTCTGACCCATAATAGGGCCTGGGC--TTTTCCAGTCATCCTCCC-ATCTAACAAAGAAAGGCGGCAGAAACTTCGCTTTCTCAAGCAAG----CCTTCCCTGATTAAAACCATAAGGCTGA-ATTCCCCCAGGGAGGAGAATGGAATTTTCTTGCTACAGATCATTACAAGGACTCAA--------AAACTCTGTGCGGGCA--GGGGCTAACTGGCAGGTAATAAAGAGACAAGTCCAGCATTCAGAATTA i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76440748 266 + 90941950 TACTGAGGGTG-----GCTCGTAGGAAGCAGTTCTGCTCTGACCCATAATAGGGCCTGGGC--TTTTCCAGTCATCCTCCC-ATCTAACAAAGAAAGGCGGCAGAAACTTCGCTTTCTCAAGCAAG----CCTTCCCTGATTAAAACCATAAGGCTGA-ATTCCCCCAGGGAGGAGAATGGAATTTTCTTGCTACAGATCATTACAAGGACTCAA--------AAACTCTGTGCGGGCA--GAGGCTAACTGGCAGGTAATAAAGAGACAAGTCCAGCATTCAGAATTA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18709909 266 + 33263144 TACTGAGGGTG-----GCTCGTAGGAAGCAGTTCTGCTCTGACCCATAATAGGGCCTGGGC--TTTTCCAGTCATCCTCCC-ATCTAACAAAGAAAGGCGGCAGAAACTTCGCTTTCTCAAGCAAG----CCTTCCCTGATTAAAACCATAAGGCTGA-ATACCCCCAGGGAGGAGAATGGAATTTTCTTGCTACAGATCATTACAAGGACTCAA--------AAACTCTGTGCAGGCA--GGGGCTAACTGGCAGGTAATAAAGAAACGAGTCCAGCATTCAGAATTA i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198413366 277 + 210400635 TAATGAGGGTGTGGTTTTTCATAGGAAGCAGTTCTGCTCTGACCAATAGTAGGGCCTGAGC--TTTTCCAGTCATCCTCCC-ATCTAACAAAGAAAGGCAGCAGAAATTTCACTTTCTCAAGCAAGCCTTCCTTCCCTGATTAAAACCATAAGGCTGA-ATTCCCCCAGGGAGGAGAATGGAATTTTCTTGCTACAGATCATTACAAGGACTCAA--------AAAATCTGTGCAGGCACTGGGGCTAACTAGCAGGTAATAAAGAGACAACTCCAGCATTCAGAACTA i calJac3.chr1 C 0 C 0 s mm10.chr15 77230669 261 + 104043685 TACTGAGGCTG-----TCTTGTAGGAAGTATTTCTGCCCAGGCTT-TAAGAGAGCTTAGGA------CCAACAACCCTAC----------AACAAAGACAACAGAAACTGCTTTTTCTCAAGTAAG----CCTTCCCTTATAAAACCCACATGGCTAAGAACACCCCAGGGAGAACAATGGAATTGTCTTGCTGCAGATTATTGCAAAGATTTAAAAAAAAAGAAAATCTGTGCAAACA--GAAGCCAACTGATTGAAAATAAAAAGATAAGTCCAGTATTAAGAACTA i mm10.chr15 I 388 I 107 s canFam3.chr10 41022720 269 - 69331447 TCCAGATGATG-----TCTCATAGGAAGCAGTACTGCTCT-ACCCACAGTAGGGCCTGGGCTTTTTTCCAATCATCCTCCCTATCTAACAAAGAAAGGCAACAGAAACTTCCCTCTCTCAACCAAG----CCTTCACTGATTAAAACCATAAGGCTGA-ATTCCCCCAGGAAGGAGAATGGAATTTTCTTGTTGCAGATTATTGCAAGGACTCAAA-------AAAATCTGTGCAGGCA--GGGGCTAAGTGGCAGAGAATTAAGAAACAAGCCCAGCACTTAGAATTA i canFam3.chr10 C 0 C 0 a score=4521973.000000 s hg38.chr22_KI270876v1_alt 259542 1265 + 263666 TAAGGC-----------------------------------------------------------------------------------ATCAAGAAAACCAGGTCAAAAAATTATTATGTAGCCTGGAGAAGAAAA-TACAAAACCAATCATGACTGTGCT--TGAGTGATTATTTT-CTCTTCTAATATCCACAATTTTAATAAC------ATAATACTTATAGAATTTAAAAATATGCTTAATTTACA-TCTGTAAAAGTAAATTCACTGCTGAAACAAGCCACATTTCCTTTCAAAGTAAGTAATTTCAGGAAATGCTCTCTATCATAGCAACCCTTTGATGAA-ACACAC-CACACACATACATCATCTGAGTTACAAACAGCAGATACCAACCTGGCTGTCCCGCGCTGGGAATCCATGATAACCTGGAGTCAGAGGCTCGTTCTATGAGAAA--GACAAGAAAAATATCAAACCATGAGATGAAAGAAAATGTTAGGCATAATCAAAATCATCCAAACTGATCAAATATAAATTCCTGCCCTGGTTCCTAAAATGTTCCA--TTAACTGTATTCCACCCTACCTAAGTGTATATATCTCCTCGTTAAGCCTCTACACTGGCAAAAAC-------AAAAAACAGTATTTGCTTAGGAGCACTATTCATAAAAACTA-TTTC---TTCCTTATGCAGCTAAATCTGTTTCCTTTCCAGTATATCTTAGGCAGGGTGCTACTGCGACTGGGGTCAGAGTTAATTCCTAACTTCATCATAcactg-tgggacttcagcatccccagccccaactcacactaagccgttagcacccctaaacactaggataaccaaaaacttgttggtttatttccaaatgtcccctggatggaaag----------gggacaagtaccaaccctgctgagaacTGCCTCTTAACCCAGAAAAGTTTTAGGTCTTCGTCTCTATCAG-CCTGTTTCCCCTCAGtttttacttttttatttatttattttttgttttatCCCCTCAGTTCTTTGAAATCTGGATGAAATCTGACCTCTGTTCAAGACTTCCTCTACTACTCTATATCATCCTATGGACTCAAGTGACTCCTC-------CTA-----ATATTTAAT---A--TTTACTTAGCTTACTTGTGCAGCTTAC-TTTTTATGTTACTTATGATTCTAATTAACCTTATTTTT-TAAAGGTATATCATGTTGAGTATCTGTCTCATTTTCACTTTAAACCACTAAGTCAAGATCCTTGAGGGCAAGGATGATAGCTAATAAAAGCCATGCAAACCCTAATTTAGTATAAGGTCAT--ATAACATGAACAC----TCATTTCCAGCTTACTTGACCCattcaatcattcagttaatatatact-aatat s panTro4.chr22 34639745 1264 + 49737984 TAAGGC-----------------------------------------------------------------------------------ATCGAGAAAACCAGGTCAAAAAATTATTACGTAGCCTGGAGAAGAAAA-TACAAAACCAATCATGACTGTGCT--TGAGTGATTATTTT-CTCTTATAATATCCACAATTTTAATAAC------ATAATACTTATAGAATTTAAAAATATGCTTAATTTACA-TCTGTAAAAGTAAATTCACTGCTGAAACAAGCCACATTTCCTTTCAAAGTAAGTAATTTCAGGAAATGCTCTCTATCATAGCAACCCTTTGATGAA-ACACAC-CACACACATACATCATCTGAGTTACAAACAGCAGATACCAACCTGGCTGTCCCGCGCTGGGAATCCATGATAACCTGGAGTCAGAGGCTCGTTCTATGAGAAA--GACAAGAAAAATATCAAACCATGAGATGAAAGAAAATGTTAGGCATAATCAAAATCATCCAAACTGATCAAATATAAATTCCTGCCCTGGTTCCTAAAATGTTCCA--TTAACTGTATTCCACCCTACCTAAGTGTATATATCTCCTCGTTAAGCCTCTACACTGGCAAAAAC-------AAAAAACAGTATTTGCTTAGGAGCACTATTCATAAAAACTATTTTC---TTCCTTATGCAGCTAAA--TGTTTCCTTTCCAGTATATCTTAGGCAGGGTGCTACTGCGACTGGGGTCAGAGTTAATTCCTAACTTCATCATAcactg-tgggacttcagcacccccagccccaactcacagtaagccactagcacccctaaacactaggataaccaaaaacttgttggtttatttccaaatgtcccctggatggaaag----------gggacaagtaccaaccctgctgagaacTGCCTCTTAACCCAGAAAAGTTTTAGGTCTTCGTCTCTATCAG-CCTGTTTCCCCTCAGTTTTTACttttttatttatttattttttGTTTTATCCCCTCAGTTCTTTGAAATCTGGATGAAATCTGACCTCTGTTCAAGACTTCCTCTACTACTCTATATCATCCTATGGACTCAAGTGACTCCTC-------CTA-----ATATTTAAT---A--TTTACTTAGCTTACTTGTGCAGCTTAC-TTTTTATGTTATTTATGATTCTAATTAATCTTATTTTT-TAAAGGTATATCATGTTGAGTATCTGTCTCATTTTCACTTTAAACCACTAAGTCAAGATCCTTGAGGGCAAGGATGATAGCTAATAAAAGCCATGCAAACCCTAATTTAGTATAAGGTCAT--ATAACATGAACAC----TCATTTCCAGCTTACTTGACCCattcaatcattcagttaatatatact-aatat i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31059985 1266 + 46535552 TGAGGC-----------------------------------------------------------------------------------ATCGAGAAAACCAGGTCAAAAAATTATTATGTAGCCTGGAGAAGAAAA-TACAAAAGCAATCATGACTGTGCT--TGAGTGATTATTTT-CTCTTATAATATCCACAATTTTAATAAC------ATAATACTTATAGAATTTAAAAATATGCTTAATTTACA-TCTGTAAAAGTAAATTCACTGCTGAAACAAGCCACATTCCCTTTCAAAGTAAGTAATTTCAGGAAATGCTCTCTATCATAGCAACCCTTTGATGAA-ACACAC-CACACACATACATCATCTGAGTTACAAACAGCAGATACCAACCTGGCTGTCCCGCGCTGGGAATCCATGATAACCTGGAGTCAGAGGCTCGTTCTATGAGAAA--GACAAGAAAAATATCAAACTATGAGATGAAAGAAAACGTTAAGCATAATCAAAATCATCCAAACTGATCAAATATAAATTCCTGCCCTGGTTCCTAAAATGTTCCA--TTAACTGTATTCCACCCTACGTAAGTGTGTATATCTCCTCGTTAAGCCTCTACACTGGTAAAAAC-------ATAAAACAGTATTTGCTTAGGTGCACTATCCATAAAAACTATTTTC---TTCCTTATGCAGCTAAATCTGTTTCCTTTCCAGTATCTCTTAGGCAGGGTGCTACTGCGACTGGGGTCAGAGTTAATTCCTAACCTCATCATAcactg-tgggacttcagcatcgccagccccaactcacagtaagccactagcacccctaaacactaggataaccaaaaacttgttggtttatttccaaatgtcccctggatggaaag----------gggacaagtaccaaccctactgagaacTGCCTCTTAACCCAGAAAAGTTTTAGGTCCTCATCTCTATCAG-CCTGTTTCCCCTCAGTTTTTACttttttatttatttattttttGTTTTATCCCCTCAGTTCTTTGAAATCTGGATGAAATTTGACCTCTGTTCAAGACTTCCTCTACTACTCTATATCATCCTATGGACTCAAGTGACTCCCC-------CTA-----ACATTTAAT---A--TTTACTTAGCTTACTTGTGTAGCTTAC-TCTTTATGTTATTTATGATTCTAATTAATCTTATTTTT-TAAAGGTACATCATGTTCAGTATCTGTCTCATCTTCACTTTAAACCACTAAGTCAAGATCCTTGAGGGCAAGGATGATAGCTAATAAAAGCTATGCAAACTCTAATTTAGTATAAGGTCAT--ATAACATGAACAC----TCATTTCCAGCTTACTTGACCCattcaatcattcagttaatatatact-aatat i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100616711 1263 - 115148730 TGAGGC-----------------------------------------------------------------------------------ACTGAGAAAACCAGGTCAAAAAATTATTATGTAGCCTGTAGAAGAAAA-TACAAAAGCAATCATGACTGTGCT--TGAGTGATTATTTT-CTCTTATAATATCCACAATTTTAATAAC---------ATACTTATAGAATTTAAAAATATGCTTAATTTACA-TCTGTAAAAGTAAATTCACTGCTGAAACAAGCCACATTCCCTTTCAAAGTAAGTAATTTCAGGAAATGCTCTCTATCATAGCAACCCTTTGATGAA-ACACAC-CACACACATACATCATCTGGGTTACAATCAGCAGATACCAACCTGGCTGTCCCGCGCTGGGAATCCATGATAACCTGGAGTCAGAGGCTCGTTCTATGAGAAA--GATAAGAAAAATATCAAACTATGAGATGAAAGAAAATGTTAAGCATAATCAAAATCATCCAAACTGATCAAATATAAATTCCTGTCCTGGTTCCTAAAATGTTCCA--TTAACTGTATTCCACCCTACCTAAGTGTATGTATCTCCTCATTAAGCCTCTACACTGGTAAAAAC-------AAAAAACAGTATTTGCTTAGGAGCACTATTCACAAAAACTATTTTC---TTCCTTATGCAGCTAAATCTGTTTCCTTTCCAGTATCTCTTAGGCAGGGTGCTACTGCGACTGGCGTCAGAATTAATTCCTAACTTCATCATAcactg-tgggacttcagcatccccagccccaactcacagtaagccactagcacccctaaacactaggataaccaaaaacgtgttggtttatttccaaatgtcccctggatggaaag----------gggacaagtaccaaccctgctgagaacTGCCTCTTAACCCACAAAAGTTTTAGGTCCTCGTCTCTGTCAG-CCTGTTTCCCCTCAGTTtttacttcattatttatttattttttgttttatCCCCTCAGTTCTTTGAAATCTGGATGAAATTTGACCTCTGTTCAAGACTTCCTCTACTACTCTATATCATCCTATGGACTCAAGTGACTCCTC-------CTA-----ATATTTAGT---A--TTTACTTAGCTTACTTGTGCAGCTTAC-TTTTTATGTTATTTATGATTCTAATTAATCTTATTTTT-TAAAGGTATATCACGTTGAGTGTCTGTCTCATCTTCACTTTAAACCACTAAGTCAAGATCCTTGAGGGCAAGGATGATAGCTAATAAAAGCTATGCAAACCCTAATTTAGTATAAGGTCAT--ATAACATGAACAC----TCATTTCCAGCTTACCTGACCCattcaatcattcagctaatatatact-aacat i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80758268 1265 + 95678458 TGAGGC-----------------------------------------------------------------------------------ATTGAGAAAACCAGGTCAAAAAATTATTATGTAGCCTGGAGAAGAAAA-TACAAAAGCAATCGTGACTGTGCT--TGAGTAATTATTTT-CTCTTATAATATCCACAATTTTAATAAC------ATAATACTTATAGAATTTTAAAATATGCTTAATTTACA-TCTGTAAAAGTACATTCATTGCTGAAACAAGCCACATTCCCTTTCAAAGTAAGTAATTTCAGGAAATGTTCTCTATCACAGCAACCCTTTGATGAA-ACACAC-CACACACATACATCATCTGAGTTACAAATAGCAGATACCAACCTGGCTGTCCCGCGCTGGGAATCCATGATAACCTGGAGTCAGAGGCTCGTTCTATGAGAAA--GACAAGAAAAATATCAAACTATGAGATGAAAGAAAATGTTAAGAATAATCAAAATCATCCAAACTGATCAAATATAAATTCCTGCCCTGGTTCCTAAAATGTTCCA--TTAACTGTATTCCACCCTACCTAAGTGTATATATCTCCTCGTTAAGCCTCTACGCTGGCAAAAAC-------AAAAAACAGTATTTGCTTAGGAGCACTATTCAGAAAAACTATTTTC---CTCCTTATACAGCGAAATCTGTTTCTTTTCCAGTATATCTTAGGCAGGGTGCTACTGAGACTGGGGTCAGAG-TAATTCCTAACTTCATcgtacactg-tgggacttcagcatccccagtcccaactcacagtaagccactagcacccctgaacactaggataactaaaaacttgttggtttatttccaaatgtcctctggatggaaag----------gggacaagtaccaaccctgctgagaacTGCCTCTTGACCCAGAAAAGTTCTCGGTCCTCGTCTCTATCAA-CCTGTTTCCCCTCAGTTTTTACTTTTGTATTTACTTATTTTTTGTTTTATCCCCTCAGTTCTCTTAAATCTGGATGAAATTCAACCTCTGTTCAAGACTTTCTCTACTACTCTATATCATCCTATGGACTTAAATGACTCCTC-------TTA-----ATATTTAAT---A--TTTACTTAGCTTACTTGTGCAGCTTAC-TTTTTACGTTATTTATGATTCTAATTAATCTTATTTTT-TAAAGGTATATCATGTTGAGTATCTATCTCATCTTCACTTTAAACCACTAAATCAAGATCCTTGAGGGCAAGGATGATAGCTAATAAAAGCTATGCAAACCCTAATTTAGTATAAGGTCAT--ATAACATGAACAC----TCATTTCCAGCTTATTCGACCCattcaatcattcagttaacatatact-aatat i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81184951 1265 - 96509753 TGAGGC-----------------------------------------------------------------------------------ATCGAGAAAACCAGGTCAAAAAATTATTATGTAGCCTGGAGAAGAAAA-TACAAAAGCAATCGTGACTGTGCT--TGAGTAATTATTTT-CTCTTATAATATCCACAATTTTAATAAC------ATAATACTTATAGAATTTTAAAATATGCTTAATTTACA-TCTGTAAAAGTACATTCATTGCTGAAACAAGCCACATTCCCTTTCAAAGTAAGTAATTTCAGGAAATGTTCTCTATCACAGCAACCCTTTGATGAA-ACACAC-CACACACATACATCATCTGAGTTACAAATAGCAGATACCAACCTGGCTGTCCCGCGCTGGGAATCCATGATAACCTGGAGTCAGAGGCTCGTTCTATGAGAAA--GACAAGAAAAATATCAAACTATGAGATGAAAGAAAATGTTAAGAATAATCAAAATCATCCAAACTGATCAAATATAAATTCCTGCCCTGGTTCCTAAAATGTTCCA--TTAACTGTATTCCACCCTACCTAAGTGTATATATCTCCTCGTTAAGCCTCTACACTGGCAAAAAC-------AAAAAACAGTATTTGCTTAGGAGCACTATTCAGAAAAACTATTTTC---CTCCTTATACAGCGAAATCTGTTTCTTTTCCAGTATATCTTAGGCAGGGTGCTACTGAGACTGGGGTCAGAG-TAATTCCTAACTTCATCATACACTG-TGGGACTTCAGCATCCCCAGTCCCAACTCACAGTAAGCCACTAGCACCCCTGAACACTAGGATAACTAAAAACTTGTTGGTTTATTTCCAAATGTCCTCTGGATGGAAAG----------GGGACAAGTACCAACCCTGCTGAGAACTGCCTCTTGACCCAGAAAAGTTCTAGGTCCTCGTCTCTATCAA-CCTGTTTCCCCTCAGTTTTTACTTTTGTATTTACTTATTTTTTGTTTTATCCCCTCAGTTCTCTTAAATCTGGATGAAATTCAACCTCTGTTCAAGACTTTCTCTACTACTCTATATCATCCTATGGACTTAAATGACTCCTC-------TTA-----ATATTTAAT---A--TTTACTTAGCTTACTTGTGCAGCTTAC-TTTTTACGTTATTTATGATTCTAATTAATCTTATTTTT-TAAAGGTATATCATGTTGAGTATCTATCTCATCTTCACTTTAAACCACTAAATCAAGATCCTTGAGGGCAAGGATGATAGCTAATAAAAGCTATGCAAACCCTAATTTAGTATAAGGTCAT--ATAACATGAACAC----TCATTTCCAGCTTATTCGACCCattcaatcattcagttaacatatact-aatat i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76441014 1266 + 90941950 TGAGGC-----------------------------------------------------------------------------------ATCGAGAAAACCAGGTCAAAAAATTATTATGTAGCCtggagaagaaaa-tacaaaagcaatCGTGACTGTGCT--Tgagtaattatttt-ctcttataatatccacaattttaataac------ataatacttacagaattttaaaatatgcttaattTACA-TCTGTAAAAGTACATTCATTGCTGAAACAAGCCACATTCCCTTTCAAAGTAAGTAATTTCAGGAAATGTTCTCTATCACAGCAACCCTTTGAtgaa-acacac-cacacacatacaccatcTGAGTTACAAAGAGCAGATACCAACCTGGCTGTCCCGCGCTGGGAATCCATGATAACCTGGAGTCAGAGGCTCGTTCTatgagaaa--gacaagaaaaatatcaaactatgagatgaaagaaaatgttaagaataatCAAAATCATCCAAACTGATCAATTATAAATTCCTGCCCTGGTTCCTAAAATGTTCCA--TTAACTGTATTCCACCCTACCTAAGTGTATATATCTCCTCGTTAAGCCTCTAcactggcaaaaac-------aaaaaacagtatttgCTTAGGAGCACTATTGAGAAAAACTATTTTC---CTCCTTATACAGCTAAATCTGTTTCCTTTCCAGTATATCTTAGGCAGGGTGCTACTGAGACTGGGGTCAGAG-TAATTCCTAACTTCATCATACACTG-TGGGACTTCAGCATCCCCAGTCCCAACTCACAGTAAGCCACTAGCACCCCTAAACACTAGGATAACTAAAAACTTCTTGGTTTATTTCCAAATGTCCTCTGGATGGAAAG----------GGGACAAGTACCAACCCTGCTGAGAACTGCCTCTTGACCCAGAAAAGTTCTAGGTCCTCGTCTCTATCAA-CCTGTTTCCCCTCagtttttacttttgtatttatttattttttgttttatcccCTCAGTTCTCTTAAATCTGGATGAAATTCAACCTCTGTTCAAGACTTTCTCTACTACTCTATATCATCCTATGGACTTAAATGACTcctc-------tta-----atatttaat---a--tttacttagcTTACTTGTGCAGCTTACTTTTTTACGTTATTTATGATTCtaattaatcttattttt-taaaggtatatcATGTTGAGTATCTGTCTCATCTTCACTTTAAACCACTAAATCAAGATCCTTGAGGGCAAGGATGATAGCTAATAAAAGCTATGCAAACCCTAATTTAGTATAAGGTCAT--ATAACATGAACAC----TCATTTCCAGCTTATTCGACCCATTCAATCATTCAGTTAACATatact-aatat i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18710175 1257 + 33263144 TGAAGC-----------------------------------------------------------------------------------ATCGAGAAAACCAGGTCAAAAAATTATTATGTAGCCTGGAGAAGAAAA-TACAAAAGCAATCGTGACTGTGCT--TGAGTAATTATTTT-CTCTTATAATATTCACAATTTTAATAAC------ATAATACTTATAGAATTTTAAAATATGCTTAATTTACA-TCTGTAAAAGTACATTCATTGCTGAAACAAGCC-CATTCCCTTTCAAAGTAAGTAATTTCAGGAAATGTTCTCTATCACAGCAACCCTTTGATGAA-ACACAC-CACACACATACATCATCTGAGTTACAAATAGCAGATACCAACCTGGCTGTCCCGCGCTGGGAATCCATGATAACCTGGAGTCAGAGGCTCGTTCTATGAGAAA--AACAAGAAAAATATCAAACTATGAGATGAAAGAAAATGTTAAGAATAATCAAAATCATCCAAACTGATCAAATATAAATTCCTGCCCTGGTTCCTAAAATGTTCCA--TTAACTGTATTCCACCCTACCTAAGTGTATATATCTCCTCGTTAAGCCTCTACACTGGCAAAAAC-------AAAAAACAGTATTTGCTTAGGAGCACTATTCAGAAAAACTATTTTC---CTCCTTATACAGCTAAATCTGTTTCCTTTCCAGTATATCTTAGGCAGGGTGCTACTGAGACTGGGGTCAGAG-TAATTCCTAACTTCATCATACACTGTTGGGACTTCAGCATCCCCATTCCCAACTCACAGTAAGCCACTAGCACCCCTAAACACTAGGATAACTAAAAACTTGTTGGTTTATTTCCAAACGTCCTCTGGATGGAAAG----------GGGACAAGTACCAACCCTGCTGAGAACTGCCTCTTGACCCAGAAAAGTTCTAGGTCCCCGTCTCTATCAA-CCTGTTTCCCCTCAGTTtttacttttgtatttatttattttttgttttatCCCCTCAGTTCTCTTAAATCTGGATGAAATTCAACCTCTGTTCAAGACTTTCTCTACTACTCTATATCATCCTATGGACTTAAATGACTCCTCTTAATATTTA-----ATATTTAAT---A--TTTACTTAGCTTACTTGTGCAGCTTAC-TTTTTATGTTATTTATGATTCTAATTGATCT----------------TATCATGTTGAGTATCTGTCTCATCTTTACTTTAAACCACTAAATCAAGATCCTTGAGGGCAAGGATGATAGCTAATAAAAGCTATGCAAACCCTAATTTAGTATAAGGTCAC--ATAACATGAACAC----TCATTTCCAGCTTATCCGACCCGTTCAAtcattcagttaacatatact-aatat i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198413643 1228 + 210400635 TGAGGC-----------------------------------------------------------------------------------ATCAAGAAAACCAGGTCAAAGAATTATTATGTAGCCTAGA-AAGAAAA-TACAAAAGCAACCATGACTGTGCT--TGAGTGATTATTTT-CTCTTATAATATCCACAATTTTAATAAT------TTAATACTTACAGAATTTAAAACTACGCTTAATTTACA---TGTAACAGTAAATTCATTGCTGAAACCAGCCACATTCCCTCTCAAAATAAGTAATTTCAGGAAATGCCCTCTCTCATAGCAA-CCTTTAATGGA-ACACAC-CACACACATACATCATCTGAGTTACAAACAGCAGATACCAACCTGGCTGTCCCGCGCTGGGAATCCATGATAACCTGGAGTCAGAGGCTCGTTCTATGAGAAA--GACAAGAAAAATACCAAACTATGAGAGGAAAG-AAATATTAAGAATAATGAAAATCATCCAAACTGATCAAATACAAATTCCTGCCCTGGTTCTTAAAATGTTCCG--TTAGTTGTATTCCACCCTACCTAA--GTATGTATCTCCTCATTAAGCCTCTACAATGGCAAAAAC-------A-AAAACAGTATTTGCTTAGGAGCACTATTCGTAAAAATTATTATC---CTCCTTATGCAGCTAAATGTGTTTCCTTCCCAGTGTATCTTAGGCAGGGTGCTACTGAGACTGGGATCAGAG-TAATTCCTAACTTCATCATACAATG-TAGGACCTCAGCATTGCCAGTCCCAACTCACAGTAAGCCAC-AGCATCCCTAAATACTCGGCTAACCA-------TTTGGTTTATTTCCAAATGTCCCCTGGATAGAAAG----------GGGACAAGTACCAACCCTGCTGAGAACTACCTCTTGACCCAGAAAAGTTTTG-----TCATCTCTATCAA-CCTGTTTCCCCTCAGTTTTCAC---------------TTTTTTGTTTTATCCCCTCAGTTCTTTGAAATTTGGATGAAATTCAACCTCTGTTCAAGACTTCCTCTATTATTCTGTATCATCCTATGGACTCAAGTGACTCCTT-------GTA-----ATATTTAAT---A--TTTATTTAGCTTATTTATGCAGTTTAC-TTTTTATGTTATTTATTATTCCAATTAATCTT-TTTTT-TAAAGGTATATCATGTGGAGTGTCTGTCTCATCTTCACTGTAAACCACTAAATCAAGATCCTTGAGGGCAAAGATGATAGCTAATAAAAGCTATGTAAACCCTAATTTAGTATAAGGTCAT--ATAACATGAGCAC----TCATTTCCAGCTTACTCAACCCATTCCATCATTCAGTTAATATACACT-AGTGT i calJac3.chr1 C 0 C 0 s mm10.chr15 77231037 1144 + 104043685 taaggctacacagagaaatcatgtctcaaaaTGCTCCCCCTCaaaaaaaaaaaaaaaaaaaagcaaaacaaacaaaagaaCTAGTAGGTACCAAGAAAATGAGGTTAAAAACTCA-----TAGCCTAGAAAAGAAAAGCATCAGAGC------GGATGTACTGCTAAGAGATTG-TTT-CTCCTATAAGAGCCATACTTTAAATAATATGACTATGATACCTTCAGGATTAAGAAATGTACTTAATTCATAATATCTAAAAGCAAATTCATTGGTAAAACAAATTATACTACCTTCAAAAAT--GTAATTTCAGGAGAAGTTCTTT------------------------CAGAG-CATACTAATA--------GAATTAGAAGCA-TAGACACATACCTGGCCATCCCTTGCTGGGAATCCATGATAACCCGGGGTCAGTGGCTCGTTCTAAGACAAaataataataataataataaAACTT----TAAAAGAAAATGTTAAG---AATCAAAATCATTCAAACTAATCAAATATGAATTTTGTCTCAAGTTTCCAAAATTTGCCATTTTAAGAATCTACCTTCCTATTTTA------AGCTCTCTCCAGCTAAATACTACAATGCCATAAAC-------A-CAAACA---------------CACTACAGACAAATCCTAGTTTCTTTCTCTTTATGCAGGTAAA-CGGTTTCCCTCTCTGTGTACCTCAAGCTGAGTACTACAGAGACTTGGA--AGAG-GAAGTGCTAACTTTGTT---CCCCC-TGGAGTTTGAGCAGACCCAG---AGGCTGACACAGAAC----AGAGTTCC---ACAC--------------------------ATTTCCATGTGTTTC-----------------------------------ACCCTGTTGAGAAATGC--CTTCAACCTGGAGAGTGTCAGTTC-----CTTTATCAGTCCTGTT------------------------------------------------------------AGCCCAGATGCAGTTCCACTTCTGTTCAGGACTCCCT-TACCACCC--ACTCACCAACTGGGTCACAGTGACTCCTC-------GAACG--CATACACATT---AGTGTCACTTACATTACTTGCACTGTTCAC-TTTCCACTTCATCTAT-----TAATT--TCTTCCTTTT-GGAAT-----TCACATTTAGTG--TGTCTCATTTTCATACCAGACAGTTAAATCAAGATCTCTGAGGGCAGAGGTACTGGTCAACAGAAGCTACGC---CACTAACTCAGCAGCACAGCGTGCACAGCATGAGTAC----CTACCT-TGGCTGACTGGACCCACCTGATCATCCAGGCAATAGAGATTGGGTAC i mm10.chr15 I 107 C 0 s canFam3.chr10 41022989 1225 - 69331447 TGAGAC-----------------------------------------------------------------------------------ATCAAGAAAACCAGGTTAAAAAATTATTATACAGCCTGGAGAAGAAAA-AACAAAAGCAATTATGGTTGTGCT--TGAGTGATTTTTTTCCCCCTGTAATATCCACAATTTCAATAATGTGATTACAATTCTTTTAGGattaaaaaaatatttttatttGTA-TCTCTAAATGTAAATTCATTGATGAAACTAATCATATCACTCTCCAAAAT----TATTTCAGGAAACACTCTCCACCACTGCATCCTTAGAATGAACACACACACATACACACACACCATCTGAGTTATAAACAGGA-ATACCAACCTGGCTGTCCCGTGCTGGGAATCCATGATAACCTGGGGTCAGAGGCTCGTTCTAGGAAAAA--GAAAAGAAA---ATTAAACTATAAGACAAAAGAAAACATTAAGAATCACCAAAATCATCCAAACTGATCAAATACAAATTCCTACAACAGTTCCTAAGGTGTTCCA--TT-GCTATCTTCCACTCTAACTA----CATACCTCTCCAAGTTCAGCCTCTACAATGGCAAAAACTAAACCAAACAGATAGTATTTGCTTCAAAACACAACTCATAAACACTATTTTC---CTCCCAGTAGAGCTAAATTTGTTTCCTTCCCAATATATCTCAAACATGGAGCCACTGTGATTTGGGGCAAAT-CAACTCCTAACTTca-----cactg-tgggatgttagcctctctggcccttaaccactaaaaggtagtaggaatcacgaacattgggacaaccaaaaac--attcacacgctcccagaagtctcctggctgaacggtactgAGAGCTGAACACGCTCC--CCCTACTGAGAACCACCCCATGGCCTGG--AAGTTTTAGGCACT---CCCTATCAT-TATGT-------------------------------------------GTTCCTTCAGTTCTTTGAACCCTACATGAAATCCCGTCTCTGCAGAGGACTTCCTCTACCACCCTATATCACCCAATGGACCCAAGTGACTCCTA-------ACATGTATATATTTATTTAAA--TGTATTTAAGCTACTTGTACAATGTCC-TTTTCATATTATTTACAACTC-AATAAATCTTATTTTTGTAAAAGTATATCATATTGAGTA----TCTCATCTTCACATTA-ACCACTAAATCAAGATCCTTGAGGACAAGAATGATAGTCCATACAAGCTGTGCAAACCCTAATTTAGTATAAGGTCAT--ATGGCATGAGCATTGGGTCATTCATGGCTT----GACCCATTCAATCATTCAGTCAACATATACTGAATAT i canFam3.chr10 C 0 I 177 a score=1057112.000000 s hg38.chr22_KI270876v1_alt 260807 310 + 263666 taatattttccaagcactgttagtcgactgatg-----gagtaaaaaaagatgaattaaaaataaggcccttgctttcaagggaac-ttttaaatgagggaagaTGCACGTGCACACGAAGGAGTAAATGAGAACATACATTGCTTTTGTAATT--TTCAAAGTGCTCAACATTGCTACTTAGATA------------------------TTCATCCTCTTCTTCCATTCA-CTGTACTTTCATTCCTACTAGCAGAACAGCGTAA-AAGAAATTTTCATTGATAGGACTTTTGAATATAACAATAGAGTAAACTTTCCACTAATTGGTAGGT------------TGACT--------ATATTC s panTro4.chr22 34641009 309 + 49737984 taatattttgcaagcactgttagtcgactgatg-----gagt-aaaaaagatgaattaaaaataaggcccttgctttcaagggaac-ttttaaatgagggaagaTGCACGTGCACACGAAGGAGTAAATGAGAACATACATTGCTTTTGTAATT--TTCAAAGTGCTCAACATTGCTACTTAGATA------------------------TTCATCCTCTTCTTCCATTCA-TTGTACTTTCATTCCTACTAGCAGAACAGCGTAT-AAGAAATTTTCATTGATAGGACTTTTGAATATAACAATAGAGTAAACTTTCCACTAATTGGTAGGT------------TGACT--------ATATTC i panTro4.chr22 C 0 I 720 s ponAbe2.chr22 31061251 308 + 46535552 taatattttccaagcactgttagtcgactgatg-----gagt-aaaaaagatgaa-taaaaataaggcccttgctttcaagggaac-ttttaaatgagggaagatacatgtgcacacaaaagagtaaatgagAACACACGGCACTTTTGTAATT--TTCAAAGTGCTCAACACTGCTACTTAGATA------------------------TTCATCCTCTTCTTCCATTCA-TTGTACTTTCGTTCCTACTAGCAGAACAGCATAA-AATAAATTTTCATTGATAGGACTTTTGAATATAACAATAGAGTAAACTTTCCACTAATTGGTAGGC------------TGACT--------ATATTC i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100617974 333 - 115148730 taatattttccaagcactgttagtcgactgata-----gagt-aaaaaagatgaa-taaaaataaggcccttgctttcaagggaactttttaaatgagggaagaTTCATGTGCACACGAAGGAGTAAATGAGAACACACAGCGCTTTTGTAATT--TTCAAAGTGCTCAACATTGCTACTTAGATATTCATCCTCTTCTTCCATTCATTGTTCATCCTCTTCTTCCATTCA-TTGTACTTTCATTGCTACTAGCAGAACAGCGTAA-AAGAAATTTTCATTGATAGGACTTTCCAATATAACAATAGAGTAAACTTTCCACTAATTGGTAGGT------------TGACT--------ATATTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80759533 309 + 95678458 taaaattttccaagcactgttagttgactgatg-----gagt-aaaaaagacgaa-taaaaacaaggtccttgctttcaacggaac-ttttaaatgagggaagatacatgtgcacacaaaggagtaaatgagaacacacagtgCTTTTGTAATT--TTCAAAGTGCTCAACATCGTTACTTAGATA------------------------TTCATCCTCTTCTTCCATTCATTTGTGCTTTCATTCCTACTAGCAGAATAGCGTAA-AAGAAATTTTCATTGATAGGACTTTTGAATATAACAATAGAGTAAACTTTCCACTAATTGGTAGGT------------TGACT--------ATATTC i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81186216 309 - 96509753 taaaattttccaagcactgttagttgactgatg-----gagt-aaaaaagacgaa-taaaaacaaggtccttgctttcaacggaac-ttttaaatgagggaagatacatgtgcacacaaaggagtaaatgagaacacacagtgCTTTTGTAATT--TTCAAAGTGCTCAACATCGTTACTTAGATA------------------------TTCATCCTCTTCTTCCATTCATTTGTGCTTTCATTCCTACTAGCAGAATAGCGTAA-AAGAAATTTTCATTGATAGGACTTTTGAATATAACAATAGAGTAAACTTTCCACTAATTGGTAGGT------------TGACT--------ATATTC i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76442280 309 + 90941950 taaaattttccaaGCACTGTTAGTTGACTGATG-----GAGT-AAAAAAGACGAA-TAAAAACAAGGTCCTTGCTTTCAACGGAAC-TTTTAAATGAGGGAAGATACATGTGCACACAAAGGAGTAAATGAGAACACACAGTGCTTTTGTAATT--TTCCAAGTGCTCAACATGGTTACTTAGATA------------------------TTCATCCTCTTCTTCCATTCATTTGTGCTTTCATTCCTACTAGCAGAATAGCGTAA-AAGAAATTTTCATTGATAGGACTTTTGAATATAACAATAGAGTAAACTTTCCACTAATTGGTAGGT------------TGACT--------ATATTC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18711432 309 + 33263144 taaaattttccaagcactgttagttgactgatg-----gagt-aaaaaagacgaa-taaaaacaaggtccttgctttcaacggaac-ttttaaatgagggaagatacatgtgcacacaaaggagtaaatgagaacatacagtGCTTTTGTAATT--TTCAAAGTGCTCAACATCGTTACTTAGATA------------------------TTCATCCTCTTCTTCCATTCATTTGTGCTTTCATTCCTACTAGCAGAACAGTGTAA-AAGAAATTTTCATTGATAGGACTTTTGAATATAACAATAGAGTAAACTTTCCACTAATTGGTAGGT------------TGACT--------ATATTC i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198414871 303 + 210400635 TAAAAATTTCCAAGCACTGTTAGTTGATTGATG-----GAGT-AAAAACGTCAAA-TAAAAATAA-GCCCTTCCTTTCAAGGGAAC-CTTTAAATGAGGGAAGATACGTGTGCACACAAAGGAGTAAATGAGAACATACAGTGCTTTCGTAACT--GTCAAAGTGCTCAACATTGCTACTTAGATA------------------------TTCATCCTCTTCTTCCATTCC-----ACTTCTATTCATACTAGCAGAACAGTGTAA-AAGAAATTTTCGTTGATAGGACTTTTGAACATGACAGTAGAGTAAACTTTCCACTAATTGGTAGGT------------TGACT--------ATATTC i calJac3.chr1 C 0 C 0 s mm10.chr15 77232181 290 + 104043685 TAAAA-TTCCAAATTAACATTAAATGGCTAAAG-----ACAT-GAGAAAGGTAAG---CAAACGATGCCCCCGCCTCCCAGGAAAC-TT--------GAGGAGATA-GTGCACACACAAAGGACAAAC----AGCACATAATTTCTTTGTAATT---TCTAAGAATTCAATGTAGTTACTTA-ATA------------------------GCC-TAGTTCTCTTCTGGGCACTTGGATTTTCATTCATACTAA-AGAA------AA-GAGGAATGTTCATTGATGGAGCTT-----CATGGAAAAAGAATAAAATTTCCACTTAATGGCAGCCACATCAAAGATATAATT--------ACATTC i mm10.chr15 C 0 I 12 s canFam3.chr10 41024391 303 - 69331447 TAATATTTTAAAAGTACTGTTAGATAACTAATAATTATGAGT-AAGaaaggtgaa-t-aacacaaggcccttgccttcaagtgaac-ttttaagtgggaggagatacatgtgcacacaca-------------------aGTGCTTTTGTAATTTTTTCAATGTGCTCAACACAATTACTTGGAAA------------------------ATACTCATCCTCTTCCATCCATTTATGTTTTCATTCCCACTGGCAGAATAACAAGGTTAAGAATTTGCATTGATACGATTTTCATATATTGCAAGACAGC--ACTTTCCAACTAATGGTACAT------------CTGCTTTGACAAGATATCC i canFam3.chr10 I 177 C 0 a score=392499.000000 s hg38.chr22_KI270876v1_alt 261117 137 + 263666 AGATATTTG-ATAGTCA-------------------AAAGCATGGAAGTCTGAAGACAACTTAAGCTTACTgcagagaccctgtgtcttgttcatcatg----gtttc--cctgagatctagcacagtatctaacacat-gtagacacccaaaagaatgtGT-AA s ponAbe2.chr22 31061559 137 + 46535552 AGATATTTG-ATAGTCA-------------------AAAGCATGGAAGTCTTAAGACAACTTAAGCTTACTgcagagaccctgtgtcttgttcatcatg----gtttc--cctgagatctagcacagtatttaacacat-gtagacacccaaaagaatgtGT-AA i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100618307 137 - 115148730 AGATATTTG-ATAGTCA-------------------AAAGCATGGAAGTCTGAAGACAACTTAAGCTTACTgcagagaccttgtgtcttgttcatcatg----gtttc--cctgagatctagcacagtatctaacacat-gtagacacccaaaagaatgtGT-AA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80759842 138 + 95678458 AGATATTTG-ATAGTCA-------------------AAAGCATGAAAGTCCGAAGACAACTTAAGCTCACTgcagagaccctgtgtcttgttcatcatg----atttc--cctgagatctagcacagtatctaacacat-gtagacacccaaaagaatgtgtaaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81186525 138 - 96509753 AGATATTTG-ATAGTCA-------------------AAAGCATGAAAGTCCGAAGACAACTtaagctcactgcagagaccctgtgtcttgttcatcatg----atttc--cctgagatctagcacagtatctaacacat-gtagacatccaaaagaatgtgtaaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76442589 138 + 90941950 AGATATTTG-ATAGTCA-------------------AAAGCATGAAAGTCCGAAGACAACTTAAGCTCACTGCAGAGACCCTGTGTCTTGTTCATCATG----ATTTC--CCTGAGATCTAGCACAGTATCTAACACAT-GTAGACACCCAAAAGAATGTGTAAA i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18711741 138 + 33263144 AGATATTTG-ATAGGCA-------------------AAAGCATGAAAGTCCGAAGACAACTtaagctcactgcagagaccctgtgtcttgttcatcatg----atttc--cctgagatctagcacaatatctaacacat-gtagacacccaaaagaatgtgtaaa i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198415174 138 + 210400635 AGATATTTG-ATAGTCA-------------------AAAGCATGAAAACCAGAAGACAACTTAAGCTCACTgcagagaccctgtgtcttcttcaccatg----gtttc--cctgagatctagcacagtatctaatgcat-gcagacacccaaaagaatgtttaaa i calJac3.chr1 C 0 C 0 s mm10.chr15 77232483 161 + 104043685 ATGTATTCACAGAGTCA-AAGTTTATACT-CCCTCCAAAACAATGAGAAGTAGGGTCAATTTAAGCTTA-TACAGGACCATTGTCTCTTGTCCATCATACCCCATTCCCTCCCAAGATCTAGCATACTGACTAACACATGGTAGGCACCTAAAAGAATATTTAA- i mm10.chr15 I 12 I 1552 s canFam3.chr10 41024694 154 - 69331447 TTATCTTTG-ATAATCAAAAATCCACACTGCATTCAAAAACATGAAAA-CCAGGGACaacataagctcaattcagagaccccatgtc-tgttcatcaca----gtcac--ccagcaatctagcacagtgtctaacacacagtgggca--caaaacaatggataaa i canFam3.chr10 C 0 C 0 e panTro4.chr22 34641318 720 + 49737984 I a score=103068.000000 s hg38.chr22_KI270876v1_alt 261254 41 + 263666 TAaataaatggagctaaataaccag-aaaatgtgtaggaatt s ponAbe2.chr22 31061696 41 + 46535552 TAaataaatggagctaaataaccag-aaaatgtgtaggaatt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100618444 41 - 115148730 TAaataaatggagctaaataaccag-aaaatgtgtaggaatt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80759980 42 + 95678458 taaatACACGGAGCTAAATAACCAGAAAAATGTGTAGGAATT i rheMac3.chr10 C 0 I 1532 s macFas5.chr10 81186663 42 - 96509753 taaatACACGGAGCTAAATAACCAGAAAAATGTGTAGGAATT i macFas5.chr10 C 0 I 1530 s papAnu2.chr10 76442727 42 + 90941950 TAAATACACGGAGCTAAATAACCAGAAAAATGTGTAGGAATT i papAnu2.chr10 C 0 I 1518 s chlSab2.chr19 18711879 42 + 33263144 taaatACACGGAGCTAAATAACCAGAAAAATGTGTAGGAATT i chlSab2.chr19 C 0 I 1532 s calJac3.chr1 198415312 41 + 210400635 taaataaatGATGATAAATAACCAG-AAAATGTGCAGGAATT i calJac3.chr1 C 0 C 0 s canFam3.chr10 41024848 41 - 69331447 taaataaatGGAGTTCAATAAGCTG-AAGTTATTTTGGCATT i canFam3.chr10 C 0 I 1215 e mm10.chr15 77232644 1552 + 104043685 I e panTro4.chr22 34641318 720 + 49737984 I a score=11916.000000 s hg38.chr22_KI270876v1_alt 261295 3 + 263666 cag s panTro4.chr22 34642038 3 + 49737984 CAG i panTro4.chr22 I 720 C 0 s ponAbe2.chr22 31061737 3 + 46535552 cag i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100618485 3 - 115148730 cag i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80761554 3 + 95678458 cag i rheMac3.chr10 I 1532 C 0 s macFas5.chr10 81188235 3 - 96509753 cag i macFas5.chr10 I 1530 C 0 s papAnu2.chr10 76444287 3 + 90941950 cag i papAnu2.chr10 I 1518 C 0 s chlSab2.chr19 18713453 3 + 33263144 cag i chlSab2.chr19 I 1532 C 0 s calJac3.chr1 198415353 3 + 210400635 CAG i calJac3.chr1 C 0 I 1148 s canFam3.chr10 41026104 3 - 69331447 caa i canFam3.chr10 I 1215 C 0 e mm10.chr15 77232644 1552 + 104043685 I a score=774162.000000 s hg38.chr22_KI270876v1_alt 261298 244 + 263666 acagttctgcaaaagagatgtgcaaatggccagtaagtacatgaagagatgctcaacatcataagtcatt------atgcaaatcaaaaccacattgagataa-aactcacactcatcagaatggttataaacaaaatgccagacaacaataagtattgtcaaagacatggagaaatcagaattcttctacactgcgggtgggaatgtaaaatg----gtatagctgctctggaaacagttggatagtccttc----ta---- s panTro4.chr22 34642041 244 + 49737984 ACAGATGTGcaaaagagatgtgtaaatggccagtaagtaccttaagagatgctcaatatcataagtcatt------atgcaaatcaaaaccacattgagataa-aactcacactcatcagaatggttataaacaaaatgccagacaacaataagtattgtcaaagacgtggagaaatcagaattcttctacactgcgggtgggaatgtaaaatg----gtatagctgctctggaaacagttggatagtccttc----ta---- i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31061740 244 + 46535552 acagttctccaaaagagatgtgcaaatggccaataagcacatgaagagatgctcaatatcataagtcatt------atgcaaatcaaaaccacattgagataa-aactcacactcatcagaatggttataatcaaaacgccagacaacaataagtattgtcaaagatgtggagaaatctgaattcttctacactgcgggtgggaatgtaaaatg----gtatagctgctctggaaacagttggatagtccttc----ta---- i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100618488 244 - 115148730 acagttctccaaaagagatgtgcaaatggccaataagtagatgaagagatgctcaatatcgtaagtcatt------atgcaaatcaaaaccacattgagataa-aactcacactcatcagaatggttataatcaaaacaccagacaacaataagtattgtcaaagatgtggaaaaatcagaattcttctacactgcgggtgggaatgtaaaatg----gtatagctgctctggaaacagttggatagtccttc----ta---- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80761557 242 + 95678458 acagttctccaaaagagatgtgcaaatggccagtaagtacatg--gagatgctcaatatcgtaagtcatt------atgcaaatcaaaaccacattgagataa-aacgcacactcatcagaatagttataatcaaaaagacagacaacaataagtattgtcaaagatgtggagaaatcagaattcttccacactgccagtgggaatataaaatg----gtacagctgctctggaaacagctggatagtccttc----ta---- i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81188238 242 - 96509753 acagttctccaaaagagatgtgcaaatggccagtaagtacatg--gagatgctcaatatcataagtcatt------atgcaaatcaaaaccacattgagataa-aactcacactcatcagaatagttataatcaaaaagacagacaacaataagtattgtcaaagatgcggagaaatcagaattcttccacactgcgggtgggaatgtaaaatg----gtacagctgctctggaaacagctggatagtccttc----ta---- i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76444290 242 + 90941950 acagtTCTCCAAAAGAGACGTGCAAATGGCCAGTAAGTACATG--GAGATGCTCAATATCATAAGTcatt------atgcaaatcaaaaccacattgagataa-aACTCACACTCATCAGAATAgttataatcaaaaagacagacaacaaTAAGTATTGTCAAAGATGCGGAGAAATCAGAATTCTTCCACACTgcgggtgggaatgtaaaatg----gtacagctgctctGGAAACAGCTGGATAGTCCTTC----TA---- i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18713456 242 + 33263144 acagttctccaaaagagatgtgcaaatggccagtaagtacatg--gagatgctcaatatcataagtcatt------atgcaaatcaaaaccacattgagataa-aactcacactcaccagaatagtcataatccaaaagacagacaacaataagtattgtcaaagatgcggagaaatcagaattcttccacactgcgggtgggaatgtaaaatg----gtacagctgctctggaaacagctggatagtgcttc----ta---- i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198416504 246 + 210400635 acagttctccaaaagagatatgcaaatggtcaataagtacataaagagatgctcaatatcgtaagtcatt------atgcaaatcaaaatcacatggagataa-aactcatattcctcagaat--ttataatcaaaaagccagacaacagtaagtattgtcaaggatgtggagaaatcagaattcttctacattgagggtgggaatgtaaaatg----gtatagctgctctggaaacagttgaatagtccttcaaaata---- i calJac3.chr1 I 1148 C 0 s canFam3.chr10 41026107 230 - 69331447 aaagttctccagagaagacatacaaatggccaataa----atgaaatgctactcaacctcatgagtcattagggacatgaaaatcaaaactgcagtgagaaaatatttcacactcattat----------------------gaaaaaaagaaacttcagtgaagatgtggagaaagtggaa-tctcataca-tactggtagaaacataaagtgttatgtaaaggcacttttggaatgtctgg-cagtccttc----aaaatg i canFam3.chr10 C 0 C 0 e mm10.chr15 77232644 1552 + 104043685 I a score=1691541.000000 s hg38.chr22_KI270876v1_alt 261542 499 + 263666 ttaaacatagag---tt---atatgacccagcaattccacacctgggtatgtaactaagaaaactgaaaacatatgtccacacaaaataatatacatgaatgttcatagcagcattatttcataataaccaa-----acagcagaaaaaaaccaaaatgtccgtcgattgatgaatgga---taaatgaa-----gtatggtacatccatagtggaatattattcagtaattttaaa----aataaagtacagatacaacacagatgaatactgaaaacaccatgcttgaaaacagacacaaaaggccacaaattatataatttgatttgtatgaaatatcaagaataggcagattattcatagaggcagaatataaattagtggttccagggactagcgggaagaaatgagcagtgactgctaacggc---taccaggtttatctgg-agggagatgacaatgttctggagttagattttagtgatggatgcacacatccattattatattaaaaaccactgaaa s panTro4.chr22 34642285 499 + 49737984 ttaaacatagag---tt---atatgacccagcaattccacacctgggtatataactaagaaaactgaaaacatatgtccacacaaaataatatacatgaatgttcatagcagcattatttcataataaccaa-----acagcagaaaaaaaccaaaatgtccgtcgattgatgaatgga---taaatgaa-----gtatggtacatccatagtggaatattattcagtaattttaaa----aataaagtacagatacaacacagatgaatactgaaaacaccatgcttgaaaacagacacaaaaggccacaaattatataatttgatttgtatgaaatatcaagaataggcagattattcatagaggcagaaaataaattagtggttccagggactagcgggaagaaatgagcagtgactgctaatggc---gaccaggtttatctgg-agggagatgacaatgttctggagttagattttagtgatggatgcacacatccattattatattaaaaaccaccaaaa i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31061984 499 + 46535552 ttaaacatagag---tt---atgtgacaaagcaattccacacctgggtatataactaagaaaactgaaaacatatgtccacacaaaataatatacatgaatgttcatagcagcattatttcataataaccaa-----acagcagaaaaaaaacaaaatgtccgtcgattgatgaatgga---taaatgaa-----gtatggtacatccatagtggaatattattcagtaattttaaa----aataaagtagagatacaacacagatgaatactgaaaacaccatgcttgaaaacagacacaaaaggccacaaattatataatttgatttgtatgaaatatcaagaataggcagattattcacagagacagaaaataaattagtggttccagggactagcaggaagaaatgagcagtgactgctaatggc---taccaggtttatctgg-gaggagatgacaatgttctggaattagattttagtgatggatgcacacatccattattatactaaaaaccaatgaaa i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100618732 500 - 115148730 ttaaacatagag---tt---atatgacccagcaattccacacctgggtatacaactaagaaaactgaaaacatacgtccgcacaaaataatatacatgaatgttcatagcagcattatttcataataaccaa-----acagcagaaaaaaactaaaatgtccgttgattgatgaatgga---taaatgaa-----gtatggtacatccatagtggaatattattcagtaatttaaaa----aataaagtacagatacaacacagatgaatactgaaaacaccatgcttaaaaacagacacaaaaggccacaaattatataattcgatttgtatgaaatatcaagaataggcagattattcatagagacagaaaataaattagtggttccagggactagcgggaagaaatgagcagtgactgctaatggc---taccaggtttatctggcggggagatgacaatgttctggaattaggtttcagtgatggatgcacacatccattattatactaaaaaccactgaaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80761799 495 + 95678458 ttaaacatagag---tt---atatgaccgagcaattccacacctgggtatttaactaagaaaactgaaaacatatgtccacacaaaacaatacacatgaatattcatagcagcattatttcataataaccaa-----acagcaggaaaaaaat-aaatgtccatcgattgatgaatgga---taaatgaa-----gtatggtacatctatagtggaatattattcagtaattttaaa----aataaagtacagatacaacacagatgaatactgaaaacaccatgcttgaaaacagacacagaaggccacaaatgatataattcaattcatttgaaatgtcaagaataggcag---atttatagagacagaaaatagattagtggttccagggactagcgggaagaaacgagcagtgactgctaatggc---tacgaggtttatctgg-ggggagatgacaatgttctggaattagacattagtgatggatgcacacattcattattatactaaaaaccactgaaa i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81188480 495 - 96509753 ttaaacatagag---tt---atatgaccgagcaattccacacctgggtatttaactaagaaaactgaaaacatatgtccacacaaaataatacacatgaatattcatagcagcattatttcataataaccaa-----acagcaggaaaaaaat-aaatgtccgtctattgatgaatgga---taaatgaa-----gtatggtacatctatagtggaatattattcagtaattttaaa----aataaagtacagatacaacacagatgaatactgaaaacaccatgcttgaaaacagacacagaaggccacaaatgatataattcaattcatttgaaatgtcaagaataggcag---atttatagagacagaaaatagattagtggttccagggactagcgggaagaaacgagcagtgactgctaatggc---tacgaggtttatctgg-ggggagatgacaatgttctggaattagacattagtgatggatgcacacattcattattatactaaaaaccactgaaa i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76444532 493 + 90941950 TTAAAC--AGAG---TT---ATATGACCGAGCAATTCCACACCTGGGTATTTAactaagaaaactgaaaacatatgtccacacaaaataatacacatgaatattcatggcagcattatttcataataaccaa-----acagcaggaaaaaaat-aaatgtccgtcgattgatgaatgga---taaatgaa-----gtATGGTACATCtatagtggaatattattcagtaattttaaa----aataaagtacagatACAACACAGATGAATACTGAAAACACCATGCTTGAAAACAGACACAGAAGGCCACAAATGATATAATTCAATTCGTTTGAAATGTCAAGAATAGGCag---atttatagagacagaaaatagattagtggttccAGGGACTAGCGGGAAGAAACGAGCAGTGACTGCTAATGGC---TACGAGGTTTATCTGG-GGGGAGATGacaatgttctggaattagacatTCGTGATGGATGCACACATTCATTattatactaaaaaccactgaaa i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18713698 495 + 33263144 ttaaacatagag---tt---atatgaccgagcaattccacccctgggtatttaactaagaaaactgaaaacatatgtccatacaaaataatacacatgaatattcatagcagcattatttcataataaccaa-----acagcaggaaaaaaac-aaatgtccgtcgattgatgaatgga---taaatgaa-----gtatggtacatctatagtggaatattattcagtaattttaaa----aataaagtacagatacaacacagatgaatactgaaaacaccatgcttgaaaacagacacaaaaggccacaaatgatataattcaattcgtttgaaatgtcaagaatacgcag---attcatagagacagaaaatatattagtggttccagggactagtgggaagaaacgagcagtgactgctaatggc---tacgaggtttatctga-ggggagatgacaatgttctggaattagacattagtgatggatgcacacatccattattaaactaaaaaccactgaaa i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198416750 494 + 210400635 ttaaatat--ag---tt---atatgacccagctattccacagctgggtatatgactaagaaaactgaaaacaaacgtccacataaaatcttgtacatgaatgttcatagcagcattatttcataataaccaa-----acagcagaaaaaaacc-aaatgtctatcaattgatgaatgga---taaataaagtatggtatggtacatccatagtggaatattattcagtaattttaaa----aataaagtacagctataacacagatgaacactgaaaacatcatgcttgaaaacag--acaaaaggccataaattacataattctactca--tgaaatgtcaagaacaggcat---attcatagagacagaaaatagattaatggtttaagggactagtgggaaaaaatgagcagtgactgctaatggc---aaccaggtttatttgg-ggggacatgaaaatgttctggaattaggtattagtgatggatgtacacctccattattatactaaaaaccactgaaa i calJac3.chr1 C 0 C 0 s mm10.chr15 77234196 436 + 104043685 ttaaaCACACTGCTACT---ACATGGCCCAGAAATACCACAACAGGGAATATCACCAAGGAAAC--AAAACACACATGCACTCAAGACAGGCCAT---CATGTTGAGAACAGCCTAATTTTACAGGGCCCAGAGAGTACAGCAGTGAACAACA-GAA-------CCATTAGACACAGGACACTAAATGAg-----gt----------------------------------------------taaaccatgaagatatcaca---gcaagcaaaaaagacc--------agagaga---aaatggccagaaacgtcattgttctatttataggaaaagtccaaccctaacaa---gtccatggtgacagaaaacagctgagtggtttccgaggcaaagggtaaaaaacgagcagtaaccagcagtaaccagcagcaggttctactgc-agtg--atga-aatggtttgaaattgggtactggtgacagacgcacagcttaggtgttatac--aaaaccacctgaa i mm10.chr15 I 1552 I 165 s canFam3.chr10 41026337 484 - 69331447 ttaca-acagag---ttaccatgtgatccagcaattccacactagg---tgtaaggaagaaaactgaaaacacagatccacacaaaacctcgtacagaaatgtgcataacagctttacttcagaatttccaa-----gaagtagaaacaatcc-aaatgttcaccagttgatgagtgga---taaataaa-----gtatgatataaccataattgaatgttattgggtaataatacaaaggaacaaagtattgatacaaccta-----atactgaaaacaccatact---aagtggaaaaaaagcccagcaaattgtatgactccatttatatgaaatatccagaatgaacaa---atgcacagagaaagaatagagattagcagctctaggggataaaagggcgaaatggggaatgagtggtaacagg---tgctgggtttggtttt-ggtg--atgacaacgttctggaattag----tgatgacagatacacagctttataattatactaaaaactaccaaaa i canFam3.chr10 C 0 C 0 a score=100682.000000 s hg38.chr22_KI270876v1_alt 262041 30 + 263666 cactaaa----------agcacttcataaatgcgagattt s panTro4.chr22 34642784 30 + 49737984 cactaaa----------agcacttcataaatgcgagattt i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31062483 30 + 46535552 cactaaa----------agcacttcataaatgcgagattt i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100619232 30 - 115148730 cactgaa----------aacacttcataaatgcaagattt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80762294 30 + 95678458 cactaaa----------agcacttcataaaggtgagattt i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81188975 30 - 96509753 cactaaa----------agcacttcataaaggtgagattt i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76445025 30 + 90941950 caCTAAA----------AGCACTTCATAAAGGTGAGATTT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18714193 30 + 33263144 cactaaa----------agcacttcataaaggtgagattt i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198417244 30 + 210400635 cactgaa----------agcacttcaaaaaggtgagattt i calJac3.chr1 C 0 C 0 s canFam3.chr10 41026821 40 - 69331447 cactaaaaagtactactaacactttaaaagggtaagattt i canFam3.chr10 C 0 C 0 e mm10.chr15 77234632 165 + 104043685 I a score=1179816.000000 s hg38.chr22_KI270876v1_alt 262071 359 + 263666 atggtctgtgaattatatc------------------------------tcattaaatct----gttatttaaa-aaTAA-TA---ATAGTTATAGGCAAT---------GTTGGCTATTTTTCATACTGATTTTTATAGGGGAGACATGCAGTTTAGATTTTAACAAA----------------------------------------------AGAACAAGGCTCTTTCCGAAATGCACAAGT--GCCTTTTGTTTGTTCTGGATTCTATAAATTTACTTCCACACACCATTCTCTACAAATTTTAACAATGATGATGATAA------------CCCCCCAGTTATTAAGCA-CCT-AATCA-GTACAGTTCCAGGATGGTGGAAAAGAGGAAGAGATAGAGGCAAAAAGAATGAGATAATATAGCAGTATACAAAAATATATTTCCTATCACtggggaaactaactg s panTro4.chr22 34642814 359 + 49737984 atggtctgtgaattgtatc------------------------------tcattaaatct----gttatttaaa-aaTAA-TA---ATAGTTACAGGCAAT---------GTTGGCTATTTTTCATACTGATTTTTATAGGGGAGACATGCAGTTTAGATTTTAACAAA----------------------------------------------AGAACAAGGCTCCTTCCGAAATGCACAAGT--GCCTTTTGTTTGTTCTGGATTCTACAAATTTACTTCCACACACCATTCTCTACAAATTTTAACAATGATGATGATAA------------CCCCCCAGTTATTAAGCA-CCT-AATCA-GTACAGTTCCAGGATGGTGGGAAAGAGGAAGAGATAGAGGCAAAAAGAATGAGATAATATAGCAGTATACAAAAATATATTTCCTATCACtggggaaactaactg i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31062513 353 + 46535552 atggtcggtgaattatatc------------------------------tcattaaatct----gttatttaaa-aaTAA-TA---ATAGTTA-AGGCAAT---------GTTGGCTATTTTTCATACTGATTTTTATAGGGGAGACATGCAGTTTAGATTTTAACAAA----------------------------------------------AGAACAAGGCTCCTTCCGAAATGCACAAGT--GCCTTTTGTTTGTTCTGGATTCTATAAATTTACTTCCACACACCATTCTCTACAAATTTTAACAATGATGATGATAA-------------CCCCCAGTTATTAAGCA-CCT-AATCA-GTACAGTTCCAGTATGGTGGGAAAGAGGAAGAGATAGAGGCAAAAAGAATGAGATAATATAGCAGTATACACAAATATATTTCCTATCACtgggga----aactg i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100619262 352 - 115148730 atggtctgtgaattatatc------------------------------tcattaaatct----gttatttcaa----aa-TA---ATAGTTATAGGCAAT---------GTTGGCTATTTTTCATACTGATTTTTATAGGGGAGACATGTAGTTTAGATTTTAACAAA----------------------------------------------AGAACAAGGCTCCTTGCGAAATGCACAAGT--CCCTTTTGTTTGTTCTGGATTCTATAAATTTACTTCCACACACCATTCTCTACAAATTTTAACAATGATGATGATAA------------CCCCCCAGTTATTAAGCA-CCT-AATCA-GTACAGTTCCAGTATGGTGGGAAAGAGGAAGAGATAGAGGCAAGAAGAATGAGATAATATAGCAGTATACAAAGATATATTTCCTATCACtgggga----aactg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80762324 354 + 95678458 atgatctgtgaattatatc------------------------------tcattaaa--------ttattttaa-aaTAA-TA---ATAGTTATAGGCAAT---------GTTGGCTATTTTTCATACTGATTTTTATAGGGGAAACATGCAGTTTAGATTTTAACAAA----------------------------------------------AGAACAAGGCTCCTTCCGAAATGCACAAGT--GCCTTTTGTTTGTTCTGGATTCTACAAATTTACTTCCACGCACCATTCTCTACAAATTTTAACAATGATGATGATAA-------------CCCCCCGATACTGAGCA-CCT-AATCA-GTACAGTTCCAGGATGGAGGGGAAGAGGAAGAGATAGAGGCAAAGAGAATGAGCTAATATAGCAGTATACAAAAATACATTTCCTATCACtggggaaactaactg i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81189005 354 - 96509753 atgatctgtgaattatatc------------------------------tcattaaa--------ttattttaa-aaTAA-TA---ATAGTTATAGGCAAT---------GTTGGCTATTTTTCATACTGATTTTTATAGGGGAAACATGCAGTTTAGATTTTAACAAA----------------------------------------------AGAACAAGGCTCCTTCCGAAATGCACAAGT--GCCTTTTGTTTGTTCTGGATTCTACAAATTTACTTCCACGCACCATTCTCTACAAATTTTAACAATGATGATGATAA-------------CCCCCCGATACTGAGCA-CCT-AATCA-GTACAGTTCCAGGATGGaggggaagaggaagagatagaggcaaagagaatgagCTAATATAGCAGTATACAAAAATACATTTCCTATCACtggggaaactaactg i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76445055 354 + 90941950 ATGAtctgtgaattatatc------------------------------tcattaaa--------ttattttaa-aataa-ta---atagttataggCAAT---------GTTGGCTATTTTTCATACTGATTTTTATAGGGGAAACATGCAGTTTAGATTTTAACAAA----------------------------------------------AGAACAAGGCTCCTTCCGAAATGCACAAGT--GCCTTTTGTTTGTTCTGGATTCTACAAATTTACTTCCACGCACCATTCTCTACAAATTttaacaatgatgatgataa-------------cCCCCCGATATTGAGCA-CCT-AATCA-GTACAGTTCCAGgatggaggggaagaggaagagatagaGGCAAAGAGAATGAGCTAATATAGCAgtatacaaaaatacatttcctaTCACTGGGGAAACTAACTG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18714223 354 + 33263144 atgatctgtgaattatatc------------------------------tcattaaa--------ttattttaa-aaTAA-TA---ATAGTTATAGGCAAT---------GTTGGCTATTTTTCATACTGATTTTTATAGGGGAAATATGCAGTTTAGATTTTAACAAA----------------------------------------------AGAACAAGGCTCCTTCTGAAATGCACAAGT--GCCTTTTGTTTGTTCTGGATTCTACAAATTTACTTCCATGCACCATTCTCTACAAATTTTAACAATGATGATGATAA-------------CCCCCCGATACTGAGCA-CCT-AACCA-GTACAGTTCCAGGATGGAGGGGAAGAGGAAGAGATAGCGGCAAAGAGAATGAGCTAATATAGCAGTATACAAAAATACATTTCCTATCACtggggaaactaactg i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198417274 369 + 210400635 atggtctgtg-attatatc------------------------------tcattaaatct----gttacttaaa-aaTAATTA---ATAGTTATAGGCAAT---------ACTGGCTATTTTTCATACTGATTTTTATAGGGGAGACATGCAGTTTAGATTTTAACAAA----------------------------------------------AGAACAGGGCTCCTTCCAAAATGCACAAGT--GCCTTTTGTTTATTCTGAATTCTATAAATTTACTCCAA--CACCATTCCCTACAAATTTTAACAATGATGATGATAAAAGATGATGATAACCACCAGATATTGAGCA-CTT-AATCA-GCATAGTTCTAGGAAGGAAGGGAAGAGGAAGAGATAGAGACAAAGAGAATGAGATAATATAGCAGTATACAAAAATATATTTCCTATCATtggggaaactaactc i calJac3.chr1 C 0 C 0 s mm10.chr15 77234797 423 + 104043685 atgcactgtggcatgtgtctgtatgtatgtacacacgtacacaAACACATTTTTAAATTTAAAAGGTGTTAAAATAAAAA-TG---ACAATTAAAGGCAAT---------GTTGACTCTCTTTCACACTAACAATTACAGGAAAGAAATATACTTAAATTATTTATAAAAATGGAGAGGAGGGGCAAGGCAGGAAGACTAGACAGGAGAGGCCAGAGAACAGGAATCCT---GATGTCCACAGGC--ACC--TCACTTGTTCTCAATTCTGTAGATTTACTGCAATGC-----------TATACCCTAACAGTGACGGTGACAA-------AGAAAGCCCTCAGATCTTGAGCAGTCC-AAGCA-GCATGACTCAAGGATGGGAAGAAGGAGGAAGAAAAGGAAACAAAGAGG--GGGATGACACAGGAATGTGTAAAGGTGTG--TCCTGTCTTTGGGAGA---AACTG i mm10.chr15 I 165 I 32 s canFam3.chr10 41026861 324 - 69331447 atagccggtgaattctatg------------------------------tcaatcaacct----gttatttAAC-AATAG-TAAGGATAATAATGGGCCATACATACATAGTTAGCTA-CACTCATACTAATTTTTACAGGGGAGACATACAGCTTAGACTGTAACAAAA---------------------------------------------AGAACAGGGCTCCTTCTGAAATCCACAAGTAAGTGTCCTGTTTGTTCTACATTCTGTA-ATTTACTTCAACAT-----------CAGATTTTAACAATGATTATAATAA-AGATGGTGATAACTACTAGACACTGAGCA-ATTAAATCAGGTATAATTTTAGGATGGAGGGGAGGAGGAATAGAAAGCAGCAAAAAAA--------------------AAAAAAA------------------------------ i canFam3.chr10 C 0 C 0 a score=266739.000000 s hg38.chr22_KI270876v1_alt 262430 85 + 263666 aaagaaggtaagtaactggcccaataacacatagatattgaatgggaaattcaaa-ctgccaacctgtgtctgctggactacaaa-c s panTro4.chr22 34643173 85 + 49737984 agagaaggtaagtaactggcccaataacacatagatattgaatgggaaattcaaa-ctgccaacctgtgtctgctggactacaaa-c i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31062866 86 + 46535552 agagaagttaagtaactggcccaataacacatagatattgaatgggaaattcaaa-ctgccaacctgtgtcggctggactacaaagc i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100619614 86 - 115148730 acagaaggtaagtaactggcccaataacacatagatattgaatgggaaattcaaa-ctgccaacctgtgtcggctggactacaaagc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80762678 86 + 95678458 agagaaggtaagtaactggcccgataacacacagatattgaatgggaaagtcaaa-ctgccaacctgcgtctgctggactacaaagc i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81189359 86 - 96509753 agagaaggtaagtaactggcccgataacacacagatattgaatgggaaagtcaaa-ctgccaacctgcgtctgctggactacaaagc i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76445409 86 + 90941950 AGAGAAGGTAAGTAACTGGCCCGATAACACATAGATATTGAATGGGAAAGTCAAA-CTGCCAACCTGCATCTGCTGGACTACAAAGC i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18714577 86 + 33263144 agagaaggtaagtcactggcccgataacacatagatattgaatgggaaagtcaaa-ctgccaacctgcgtctgctggactacaaagc i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198417643 86 + 210400635 agagaaggtaagtaactgacccaataagtaaaagatattgagtgggaaagtcaaa-ctgccaacctgtgtctgctggactacaaagc i calJac3.chr1 C 0 C 0 s canFam3.chr10 41027185 73 - 69331447 ACAGGAGGTA-------------ACAAAacataggtactaggtgggggaaaaaaacctttcaatccaggtctgtttgactccaaat- i canFam3.chr10 C 0 C 0 e mm10.chr15 77235220 32 + 104043685 I a score=3568294.000000 s hg38.chr22_KI270876v1_alt 262515 1082 + 263666 ccctgttctttccattTTTCCAGGTTCTCATCCCTACTAATGATTCCATATTA-TTCCCTTACA--ATAAACATTTCATGATTGTCTGAGAAGGGGATT----ATCTGATTAAGAAAGTAATCAAAAAC-CCCAAAAGCATATTAACAGAAATTCATCACTCCCAGAGGACATCCCACATATGAACCATATTCCATAAAATCCTGGAGTTCAACAATGA-----------------------AAAAAA------TATAAGGAAAAGAT--------------CACATTCG------TATAAGCCAGTATTGTCAAAAACTTCAATAGAAAAGTTGGTCATAACAGGTTGCACAGA-GATGTGTCAGAGGAAATGGATTTACTCCTCCACCTGCCTTAGC--------ACTCTTCTTTATTTC------CTACCTCTCAGA-------------------------------------TAAGGCTATTTGGAA-------------------CTCTCAAGCCCTccctgtatatatctgtctcttacaaatgcattaattttgcgtgattttgaattttacaggcatggatcctattgcaggtattcttcagtaatttggcatt---tttgctcaatactatgtaa--gattcacctccac-tagggcacataactgtatt----ttactatgattgcca-tttagtattctcttataaa---ctataaacatgtcaaataaattacttatctgtcctattttcctgttaatggataattgaattgtttccacttaatggtttttgt----gctcac---accatgctgcctacgaacattcttttagatTtgagataccatgttttacatatgagattagcaaaaatgaaaac------accatgaataggcaa--aaagatgagtcaatagatactctcacacctaatagtaggaatat---aagtatattgggatg-ctgttatggaaagtaatttggcagtact-atcaaaatattgaatgcatataccttcctgtaacttcaca---tctcta-tc-----taGACA--------------------AAGAAGCATGTGCGAAGATTTTCAAAACAGTGTTGTTTGCCTTAGTGAAAAA--CTAGGAAAAAAAACCTCAGTTTCCATTAATAATAAGGTAATAGTGTTATCAATTA----TTGCAAAATTTCAACATCCCACCTGCAAGGTTTTTAAAATAAGGTAAAATCTTTATAAATGACCTCAGGTCATAT s panTro4.chr22 34643258 1082 + 49737984 ccctgttctttccatttttccaggttCTCATCCCTACTAATGATTCCATATTA-TTCCCTTACA--ATAAACATTTCATGATTGTCTGAGAAGGGGATT----ATCTGATTAAGAAAGTAATCAAAAAC-CCCAAAAGCATATTAACAGAAATTCATCACTCCCAGAGGACATCCCACATATGAACCATATTCCATAAAATCCTGGAGTTCAACAATGC-----------------------AAAAAA------TATAAGGAAAAGAT--------------CACATTCG------TATAAGCCAGTATTGTCAAAAACTTCAATAGAAAAGTTGGTCATAACAGGTTACACAGA-GATGTGTCAGAGGAAATGGATTTACTCCTCCACCTGCCTTAGC--------ACTCTTCTTTATTTC------CTACCTCTCAGA-------------------------------------TAAGGCTATTTGGAA-------------------CTCTCAAGCCCTccctgtatatatctgtctcttacaaatgcattaattttgcgtgattttgaattttacagacatggatcctattgcaggtattcttcagtaatttggcatt---tttgctcaatactatgtaa--gattcatctccac-tagggcacataactgtatt----ttactatgattgcca-tttagtattctcttataaa---ctataaatatgtcaaataaattacttatctgtcctattttcctgttaatggataattgaattgtttccacttaatggtttttgt----gctcac---accatgctgcctacgaacattcttttagatTtgagataccatgttttacatatgagattagcaaaaatgaaaac------accatgaataggcaa--aaagatgagtcaatagatactctcacacctaatagcaggaatat---aagtatattgggacg-ctgttatggaaagtaatttggcagtact-atcaaaatattgaatgcatataccttcctgtaacttcaca---tctcta-tc-----taGACA--------------------AAGAAGCATGTGCGAAGATTTTCAAAACAGTGTTGTTTGCCTTAGTGAAAAA--CTAGGAAAAAAACCCTCAGTTTCCATTAATAATAAGGTAATAGTGTTATCAATTA----TTGCAAAATTTCAACATCCCACCTGCAAGGTTTTTAAAATAAGGTAAAATCTTTATAAATGACCTCAGGTCATAT i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31062952 1077 + 46535552 ccctgttctttccatttttccaggttCTCATCCCTACTAATGATTCCATATTA-TCCCCTTACA--ATGAACATTTCATGATTGTCTGAGAAGGGGATT----ATCTGATCAAGAAAGTAATCAAAAAC-CCCAAAAGCATATTAACAGAAATTCATCACTCCCAGAGG-------ACATATGAACCATATTCCATAAAATCCTGGAGTTCAACAATGC-----------------------AAAAAAA-GTCCTATAAGGAAAAGAT--------------CACATTCA------TATAAGCCAGTATTGTCAAAAACTTCAACAGAAAAGTTGGTCATAACAGGTTGCACAGA-GATGTGTCAGAAGAAATGGATCTACTCCTCCACCTGCCTTAGC--------ACTCTTCTTTATTTC------CTACCTCTCGGA-------------------------------------TAAGGCTATTTGGAA-------------------CTCTCAAGCCTTCCTTGTATATATCTGTCTCTTACAAATGCAttaattttgcatgattttgaattttaaagacatggatcctattgcaggtattcttcagtaatttggcatt---tttgctcaatactatgtaa--gattcatctccac-tagggcacataactgtatt----ttactatgattgcca-tttagtattctcttataaa---ctataaacatgtcaaataaattacttatctgtcctattttcctgttaatggataactgaattgtttccactt-acggtttttgt----gctcac---accatgctgcctatgaacattcttttagatTtgagataccatgttttacatatgagattagcaaaaatgaaaac------accataaataggtaa--aaagatgagtcaatggatactctcacacttaatagtaggaatat---aagtatattgggacc-ctgttatggaaagtaatttggcagtagt-atcaaaatattgaatgcatataccttcctgtaacttcaca---tctcta-tc-----tagaca--------------------aagaagcatgtgcaaagattttcaaaacagtgttgtttgccatagtgaaaaa--ctagaaaaaaaa--ctcagtttccattaataataaggtaatagtGTTATCAATTA----TTGCAAAATTTCAACATCCCACCTGCAAGGTTTTTAAAATAAGGTAAAATCTTTATAAATGACCTCAGGTCATAT i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100619700 1082 - 115148730 ccctgttctttccatttttccaggttCTCATCCCTACTAATGATTCCATATTA-TCCCCTTACA--ATAAACATTTCATGATTGTCTGGGAAGGGGATT----GCCTGATTAAGAAAGTAATCAAAAAC-CCCAAAAGCATATTAACAGAAATTCATCACTCCCAGAGTACATCCCACATACGAACCATATTCCATAAAATCCTGGAGTTCAACAATGC-----------------------AAAAAAA-GTCCTATAAGGAAAAGAT--------------CACATTCG------TATAAGCCAGTATTGTCAAAAACTTCAATAGAAAAGCTGGTCATAACAGGTTGCACAGA-GATGTGTCAGAGGAAATGGATTTACTCCTCCACCTGCCTTGGC--------ATTCTTCTTTATTTC------CTACCTCTCAGA-------------------------------------TAAGGCTATTTGGAA-------------------CTCTCAAGCCCTCCTTgtatatatctgtctcttacaaatgcattaattttgcatgattttgaattttacagacatggatcctattgcaggtattcttcagtaatctggcatt---tttgctcaatactatgtaa--gattcatctccac-tagggcacataactgtatt----ttactatgattgcca-tttagtattctcttataaa---ctataaacatgtcaaataaattacttatttgtcctattttcctgttaatggataattgaattgtttccactt-acggtttttgt----gctcac---accatgctgcctatgaacattcttttagatTtgagataccatgttttacatatgagattagcaaaaatgaaaac------accataaataggcaa--aaagatgagtcaatgggtactctcacacctaatagtaggaattt---aagtatactgggacc-ctgttatggaaagtaatttggcagtact-atcaaaatattgaatgcatataccttcctgtaacttcaca---tctcta-tc-----tagaca--------------------aagaagcatgtgcaaagactttcaaaacagtgttgtttgccacagtgaaaaa--ctagaaaaaaAC----CTGTTTCCATTAATAATAAGGTAATAGTGTTATCAACTA----TTGCAAAATTTCAACATCCCACCTGCAAGGTTTTTAAAATAAGGTAAAATCTTGATAAATGACCTCAGGTCATAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80762764 1093 + 95678458 ccctgttctttccattTTTCCAGG-TCTCATCCCTTCTAATCATTCCATATTA-TCCCCTTACA--AGAAACATTTCATGATTGTCTGAGAAGGGCATT------------AAGAAAGTAATCAAAAAT-CCCAAAAGCATATTAACAGAAATTCATCACTCCGAGAGGACATCCCACATATGAACCATATTCCATGAAATCCTGGAGTTCAACAATGC----------aaaaaaaaaaaaaaaaaaaa-GTCCTATAAGGAAAAGAT--------------CACATTCA------TATAAGCCAGTATTGTCAACAACTTCAATAGAAAAGTTGGTTGTAACAGGTTGCACAGA-GATGTGTCAGAGGAAATGGATTTACTCCTCCACCTGCCTTAGCAAAGCATTACTCTTCTTTATTTC------CTACCTCTCAGA-------------------------------------TAAGGCTATTTGGAA-------------------CTCTCAAGCCCTCCTTGCATATACCCGTCTCTTATACATGCAttaattttgcatgattttgaattttacagacatggatcctattgcaggtattctttagtaatttggcatt---tttgcttgatactatataa--gattcatctccac-tagtgcacgtaactatttt--actaactgtgattgcca-tttagtattctcttataaa---ctataaacatgtcaaataaattacttatctgtcctattttcctgttaatggataactgaactgtttccagtt-atggtttttct----gctcac---accatgctgcctatgaacattcGTTTAGATTtgagataccatgtttcacttatgagattagcaaaaatggaaac------accataaatagacaa--aaagatgagtcaacggatactctcacacctaacagtaggaatat---aagtatattgggacc-ctgttatggaaagtaatttgacagtact-atcaaaatattgaatgcatataccttcttgtaacttcaca---tctcta-tc-----tagaca--------------------aagaagcatgtgcaaagattttcaaaaca-----gtttgcgatagtgaaaaa--caagaaaaaaac--ctcagtttccattaataACAAGGTAATAGCGTTATCAATTA----TTACAAAATTTCAACATTCCACCTGCACGAGTTTTAAAATAAGGTAAAATCTTTATGAATGACCTCAGGTCATAT i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81189445 1103 - 96509753 ccctgttctttccattTTTCCAGG-TCTCATCCCTTCTAATCATTCCATATTA-TCCCCTTACA--AGAAACATTTCATGATTGTCTGAGAAGGGCATT------------AAGAAAGTAATCAAAAAT-CCCAAAAGCATATTAACAGAAATTCATCACTCCGAGAGGACATCCCACATATGAACCATATTCCATGAAATCCTGGAGTTCAACAATGCaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa-GTCCTATAAGGAAAAGAT--------------CACATTCA------TATAAGCCAGTATTGTCAACAACTTCAATAGAAAAGTTGGTTGTAACAGGTTGCACAGA-GATGTGTCAGAGGAAATGGATTTACTCCTCCACCTGCCTTAGCAAAGCATTACTCTTCTTTATTTC------CTACCTCTCAGA-------------------------------------TAAGGCTATTTGGAA-------------------CTCTCAAGCCCTCCTTGCATATACCCGTCTCTTACACATGCAttaattttgcatgattttgaattttacagacatggatcctattgcaggtattctttagtaatttggcatt---tttgcttgatactatataa--gattcatctccac-tagtgcacgtaactatttt--actaactgtgattgcca-tttagtattctcttataaa---ctataaacatgtcaaataaattacttatctgtcctattttcctgttaatggataactgaactgtttccagtt-atggtttttct----gctcac---accatgctgcctatgaacattcGTTTAGATTtgagataccatgtttcacttatgagattagcaaaaatggaaac------accataaatagacaa--aaagatgagtcaacggatactctcacacctaacagtaggaatat---aagtatattgggacc-ctgttatggaaagtaatttgacagtact-atcaaaatattgaatgcatataccttcttgtaacttcaca---tctcta-tc-----tagaca--------------------aagaagcatgtgcaaagattttcaaaaca-----gtttgctatagtgaaaaa--caagaaaaaaac--ctcagtttccattaataACAAGGTAATAGCGTTATCAGTTA----TTACAAAATTTCAACATTCCACCTGCACGAGTTTTAAAATAAGGTAAAATCTTTATGAATGACCTCAGGTCATAT i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76445495 1085 + 90941950 Ccctgttctttccatttttccagg-TCTCATCCCTTCTAATCATTCCATATTA-TCCCCTTAca--agaaacattttatgattGTCTGAGAAGGGCATT------------AAGAAAGTAATCAAAAAT-CCCAAAAGCATATTAACAGAAATTCATCACTCCGAGAGGACATCCCCCATATGAACCACATTCCATGAAATCCTGGAGTtcaacaatgc------------------aaaaaaaaaaaa-gtcctataaGGAAAAGAT--------------CACATTTG------TATAAGCCAGTATTGTCAAAAACTTCAATAGAAAAGCTGGTTGTAACAGGTTGCACAGA-GATGTGTCAGAGGAAATGGATTTACTCCTCCACCTGCCTTAGCAAAGCATTACTCTTCTTTATTTC------CTACCTCTCAGA-------------------------------------TAAGGCTATTTGGAA-------------------CTCTCAAGCCCTCCTTGCATATATCCGTCTCTTACACATGCATTAATTTTGCATGATTTTGAATTTTACAGACATGGATCCTATTGCAGGTATTCTTTAGTAATTTGGCATT---TTTGCTTGATACTATATAA--GATTCATCTCCAC-TAGCGCACATAACTATTTT--ACTAACTATGATTGCCA-TTTAGTATTCTCTTATAAA---CTATAAACATGTCAAATAAATTACTTATCTGTCCTATTTTCCTGTTAATGGATAATTGAACTGTTTCCAGTT-ATGGTTTTTCT----GCTCAC---ACCATGCTGCCTATGAACATTCGTTTAGATTTGAGATACCATGTTTCACTTATGAGATTAGCAAAAATGGAAAC------ACCATAAATAGACAA--AAAGATGAGTCAACGGATACTCTCACACCTAACAGTAGGAATAT---AAGTATATTGGGACC-CTGTTATGGAAAGTAATTTGACAGTACT-ATCAAAATATTGAATGCATATACCTTCTTGTAACTTCACA---TCTCTA-TC-----TAGACA--------------------AAGAAGCATGTGCAAAGATTTTCAAAACA-----GTTTGCAAtagtgaaaaa--caagaaaaaaac--ctcaGTTTCCATTAATAACAAGGTAATAGCGTTATCAATTA----TTACAAAATTTCAACATTCCATCTGCACGagttttaaaataaggtaaaatcTTTATGAATGACCTCAGGTCATAT i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18714663 1091 + 33263144 ccctgttctttccattTTTCCAGG-TCTCATCCCTTCTAATCATTCCATATTA-TCCCCTTACA--AGAAACATTTCATGATTGTCTGAGAAGGGCATT------------AAGAAAGTAATCAAAAAT-CCCAAAAGCATATTAACAGAAATTCATCACTCCGAGAGGACATCCCACATATGAACCATATTCCATGAAATCCTGGAGTTCaacaatgc--------aaaaaaaaaaaacaaaacaaaa-CTCCTATAAGGAAAAGAT--------------CACATTCG------TATAAGCCAGTATTGTCAAAAACTTCAATAGAAAAGTTGGTTGTAACAGGTTGCACAGA-GATGTGTCAGAGGAAATGGATTTACTCCTCCGCCTGCCTTAGCAAAGCATTACTCTTCTTTATTTC------C-ACCTCTCAGA-------------------------------------TAAGGCTATTTGGAA-------------------CTCTCAAGCCCTCCTTGCATATACCCGTCTCTTACACCTGCAttaattttgcatgattttgaattttacagacatggatcctactgcaggtattctttagtaatttggcatt---tttgcttgatactatataa--gattcatctccac-tagcgcacataactatttt--actaactatgattgcca-tttagtattctcttataaa---ctataaacatgtcaaataaattacttatctgtcctattttcctcttaatggataattgaactgtttccagtt-atggtttttct----gctcac---accatgctgcccatgaacattcGTTTAGATTtgagataccatgtttcacttatgagattagcaaaaatggaaac------accataaatagacaa--aaagatgagtcaacggatactctcacacctaacagtaggaatat---aagtatattgggacc-ctgttatggaaagtaatttgacagtact-atcaaaatattgaatgcatataccttcttgtaacttcaca---tctcta-tc-----tagaca--------------------aagaagcatgtgcaaagattttcaaaaca-----gtttgcgatagtgaaaaa--caagaaaaaaac--ttcagtttccattaataac---gtaatagcGTTATCAATTA----CTGCAAAATTTCAACATTCCACCTGCACGAGTTTTAAAATAAGGTAAAATCTTTATGAATGACCTCAGGTCATAT i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198417729 1087 + 210400635 ccctgttctttccacttttccaggttatcatctctACTAATCATTCCATATTA-TCCCCTTAAA--ACAAATATTTCATAAT----TGAGAAAGGGATTAATTATATGATTAAGAAAGTAATCAAAAAC-CCCAAAAGCATATTAACAGAAATTCATCACTCCCAGAGGACATCCCACATATGAACAATATTCCATGAAATCATGGAGTTCAACAATGC-----------------------AAAAAAC-TTTTTATAAGGAAAAGAT--------------CACATTCG------TATAAGCCAGTATTGTCAAAAACTTCAATAGCAAACATGGTCATAATAGGTTACACAGA-GATGTGTCAGAGGAAATGGATAAA---CTCCACCTGCCATAGCAAAGCATTACTCTTCTTTGTTTC------CTATCTCTCAGA-------------------------------------TAAGGCTATTTGGAA-------------------CTCTCCAGCCCTCTTTGTTTTTATCTGTCTCTTACAAATGCAttgattttgcatgattttgaattttacagacatggatcctattgtaggtattctttagtaatttggcatt---ttggctcaatactatgtaa--gattcatctccac-tagtgcacataattatattttattaactttgattgcca-tttagtattctcttataaa---ctataaacatgtcaaataaattacttatctgtcctatttttctgttaatgaata----aattgttttcagtt-atggtttttgt----actcac-aaaccatgctgcttttaaacgttcttttagatTtaagataccatgtttcacttatgagactggaaaaaatgagaac------accataaataggcaa--aaagataagtaaatgggtactctgacacctaacaggaggaatat---aagaatattgggatc-ctgttatggaaagtaatttgacactact-atcaaaatattgaatgcatataccttcttgtaacttcaca---tctcta-tc-----tagaca--------------------aagaagcatgtgcagagattttcaaaacagtgttgtttgtgatagtgaaaaa--ctagaaaaaaac--ctcagtttccattaataACAAGATAACAGTGTTATCAATTATTAGTTGCACAATTTCAACATCTCACCTACAAGG--------ATAAGGTAAAATCTTTATGAATGATCTCAGGTCATAT i calJac3.chr1 C 0 C 0 s mm10.chr15 77235252 1047 + 104043685 CCCTGTTTTTCCCACTTTT-CAGGTTCTCATC------AATCATCCTATTTCA-CCCTTTAAAACTACAAAGATGTCAACATTTTCTCGGGAG----TT--ATATCTGACTAAGAAAGTAGTCAAAAG--ACCAAGTGCTTGCTAACAAGGACTTAT-ACCCCCAGACAACAGTCCATATATGCATCCTATGTCCTGACATCCTAGAGACCAACAGTAC-----------------------AAAAAACTGTTTAATTTGAGAGAGACAGAGTGAGAGCAAGCACATGCATGATTCTGGGAGCTCATGTCGTCTAAAACACTAGAAGCAAAGATGG----AACAAGACCAACATCTGTTGTACCAGAAGA-------------CTAAGGCTACTGGGA---------ACTCTTCTGTGTGTTGGAGAGCTTTGTCTCAGA-------------------------------------ATGGCCTAAACTAAATGAAGAAGCATGGTTTTCCTTTTCAATTGTACCTTG--TACACCCATCTCTAACA-ATGCATTAGCTTTGCA--------------------------------GTATGTGTTTCCTAGCAA------------CTCGCTCAATTCTGTGTGG--GGCTCATTTCCACTTAGTGCACCCTGACACATC-CACGCATTCTCAGTGCTGCTCTAGTACAGTATCCTAAATGCCGATGGGTATTTCCA----------------CCCTACGTTC---TGGGTGAATACTGAAATTCTTCTCCCTT-A--GACCCCCT----GCTTAC--TAACACACAGCTTGTGGGCATCCTTTTAGAGTTGAGACACCACTTCCCATCCATGAAATCAGCAAAAAAGCAAAT------GAAACTATTTAACTGTCAAGACTGCACAAACAGGGATCATCATATCTAAT-GTAGGAACAT----AGCATACAGGGACC-AC----TGACAAGCAATGGGGCA---------AAAATACCTAGTACACACTCCACCTTAGAACTCTCCATTCTCTCTACTC-----TAGAGACTCACCAGTACACGTGCTC-AGGAAGCACGTGGGCAGATTGT-----CCGTGTTGTCAGTCACAGAGAAAACTTCCTAGGAGGAGC--TTCCGTTTCC-CTCACAATGGGGAAAT---GTTATCATTTA----T---ATAGCTTCAACATCCTGTGTGCCAG--TTTAAAAATAAAGAGAACTCTCTAAGAACTATCTAAGCTCATAT i mm10.chr15 I 32 N 0 s canFam3.chr10 41027258 1127 - 69331447 ccctattctttccattttatcaagttctcttcCACAATAACCATTCCACATTATTTTTTTTAAA--GTAACTATTCCTAGATTGTCTGATAAAGAAATT----ATATGATTAAGAAAGTAATGGAAAACACCCAAAAACAAATTAAC----ATTCATCACTCCCAGAGAATATCCCACATAGAAACTATATTC----------TTGAGTTCGACAACGC-----------------------TGAGAAC-TTCTTATAAGGAAAAAAA--------------T-CAAACC------TACAAGGTGGTATTGTCAGAAGTT--------AACACTTCTGTTAACAGGTTGCACAGA-TAGATGTCAGAGCAAATGGCCTCACTCCTTCACCGGCCTTAGCAAAGTCAAGTTCCTACTCA----------CCAGCCCTCAGAGACTCTCTGCCTATGAAAGTGGCCAACCCTTAACGACAAAGGcttattttat-------------------tttttaattttatcatgtaaaaatctgtctcttcataatgcattaactttgcacttttttaa--tttatagaaatggattttatcacatgtactctttagcaatttcctcttttctttgctcaaaactatgaaatttgctcatctcccc-ttatgcatcttactctatc----tcactgtgaccccta-ttttgaattctatc--------ttatgactatgtc--acaatttattcatctgtcttattctcctgttaatagatttttaaattgtttccaggt-atgctttttctttgcactcacaaaaccatgatgtctatgaacattcttTTGGATTtgagacattatttttcactcatgaaactggcaaaaatgaaaacaaaaatatcatgagttagcaa--gaa---gaataaataggcaccttcacatctaatagtaggaatataataagtatattgagatcgctgctttggaaagcaatttgacaataatcattaaaatgctaagtacacataccgtcttgtaatttccca---tctctg-ccctctgtagcca--ctcctgcgtgtgtgctcaaagaagcatgtgcgaagaccttcaatgcactgctgtttgtaatagtgaaaa---cttggtaagaac--ctTGGTCTCACTAAACAATGAGA-AATAGTGCTAATTATTA----T------ATTTCAACACCCTGTGTACAAGTTTTTAAA---AAGGTAAAATCTCTACAAACTACCTAGTGACATAT i canFam3.chr10 C 0 C 0 a score=52902.000000 s hg38.chr22_KI270876v1_alt 263597 13 + 263666 TAAATGACAGCAG s panTro4.chr22 34644340 13 + 49737984 TAAATGACAGCAG i panTro4.chr22 C 0 C 0 s ponAbe2.chr22 31064029 13 + 46535552 TAAATGACAGCAG i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr7b 100620782 13 - 115148730 TAAATGACAGCAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr10 80763857 13 + 95678458 TAAATGACAGCAG i rheMac3.chr10 C 0 C 0 s macFas5.chr10 81190548 13 - 96509753 TAAATGACAGCAG i macFas5.chr10 C 0 C 0 s papAnu2.chr10 76446580 13 + 90941950 TAAATGACAGCAG i papAnu2.chr10 C 0 C 0 s chlSab2.chr19 18715754 13 + 33263144 TAAATGACAGCAG i chlSab2.chr19 C 0 C 0 s calJac3.chr1 198418816 13 + 210400635 TAAATGACAGCAG i calJac3.chr1 C 0 C 0 s canFam3.chr10 41028385 13 - 69331447 TAAATAATAGCAG i canFam3.chr10 C 0 N 0 a score=172388.000000 s hg38.chr22_KI270876v1_alt 263610 56 + 263666 AACAGAACACTCAAGCAGAAATGGCTAGCT---ACACAGAAGGCTCAGGCAGGAGGATC s panTro4.chr22 34644353 56 + 49737984 AACAGAACACTCAAGCAGAAATGGCTAGCT---ACACAgaaggcccaggcaggaggatc i panTro4.chr22 C 0 N 0 s ponAbe2.chr22 31064042 56 + 46535552 AACAGAACACTCAAGCAGAAATAGctagct---gcacagaaggctcaggcaggaggatc i ponAbe2.chr22 C 0 N 0 s nomLeu3.chr7b 100620795 56 - 115148730 AACAGAACACTCAAGCAGAAATGGCTAGCT---ACACAgaaagctcgggcaggaggatc i nomLeu3.chr7b C 0 N 0 s rheMac3.chr10 80763870 56 + 95678458 AACAGAACGCTCAAGCAGAAATGGCTAGCT---ACACAGACggctcaggcaggaggatc i rheMac3.chr10 C 0 N 0 s macFas5.chr10 81190561 56 - 96509753 AACAGAACGCTCAAGCAGAAACGGctagct---acacagacggctcaggcaggaggatc i macFas5.chr10 C 0 N 0 s papAnu2.chr10 76446593 59 + 90941950 AACAGAACGCTCAAGCAGAAATGGCTAGCTGTGACACAGacggctcaggcaggaggatc i papAnu2.chr10 C 0 N 0 s chlSab2.chr19 18715767 56 + 33263144 AACAGAACGCTCAAGCAGAAATGGctagct---acacagacggctcaggcaggaggatc i chlSab2.chr19 C 0 N 0 s calJac3.chr1 198418829 56 + 210400635 AACAGAAGGCTCAGGCAGAAATGACTAGCT---ACACAgaaggctcaggcaggaggatc i calJac3.chr1 C 0 N 0