##maf version=1 scoring=roast.v3.3 a score=311.000000 s hg38.chr6_KB021644v2_alt 0 2 + 185823 AC s panTro4.chr6 170613540 2 + 172623881 AC i panTro4.chr6 N 0 C 0 s macFas5.chr4 169001502 2 - 170955103 AT i macFas5.chr4 N 0 C 0 a score=158715.000000 s hg38.chr6_KB021644v2_alt 2 186 + 185823 GCTGGGGGGAAACGCCTGCAGCTGGCTCTTCCGGGCATCACTGAATTCCATGCTGGGGGGAAACGCCTGCAGCTGGCTCTTCCGGGCATCACTGAATTCCATGCTGGGGGGAAACGCCTGCAGCTGGCTCTTCTGGGCATCGCTGAATTCCATGCTAGGGGGAAACGCCTACAGCTGGCTCTTCTG s panTro4.chr6 170613542 186 + 172623881 GCTGGGGGGAAACGCCTGCAGCTGGCTCTTCTGGGCATCACTGAATTCCATGCTGGTGGGAAACGCCTGCAGCTGGCTCTTCTGGCTGTCACTGAATTCCATGCTGGGGGGAAACACCTGCAGCTGGCTCTTCTGGGCATTGCTGAATTCCATGCTAGGGGGAAACGCCTACAGCTGGCTCTTCTG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172360587 186 + 174210431 GCTGGGAGGAAATGCCTGCAGCTGGCTCTTCTGGGTGTCACTGAATTCCATGCTGGGAGGAAATGCCTGCAGCTGGCTCTTCTAGGCGTCACTGAATTCCACGCTGGGGGCAAATGCCTGCAGCTGGCTCTTCTGGGTGTCACTGAATTCCACGCTGGGGGGAAATGCCTGCAGCTGGCTCTTCTG i ponAbe2.chr6 N 0 C 0 s rheMac3.chr4 168045609 186 + 169853907 GCTGGGAGGAAACGCCTGCAGCTGGCTCTTCTGGGCGCCACTGAATTCCATGCTGGGGGGAAACGCCTGCAGCTGGCTTTTCTGGGCATCACTAAATTCCATGCTGGGAGGAAACGCCTGCAGCTGGCTCTTCTGTGCGCCACTGAATTCCATGCTGGGAGAAAACGCCTGCAGCTGGCTCTTCTG i rheMac3.chr4 N 0 C 0 s macFas5.chr4 169001504 186 - 170955103 GCTGGGAGGAAACGCCTGCAGCTGGCTCTTCTGGGCGTCACTGAATTCCATGCTGGGAGGAAACGCCTGCAGCTGGCTCTTCTGGGCGTCACTGAATTCCATGCTGGGAGGAAACGCCTGCAGCTGGCTCTTCTGGGCATCACTGAATTCCATGCTGGGGGGAAACGCCTGCAGCTGGCTCTTCTG i macFas5.chr4 C 0 C 0 a score=5848.000000 s hg38.chr6_KB021644v2_alt 188 5 + 185823 GGCGT s panTro4.chr6 170613728 5 + 172623881 GGCGT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172360773 5 + 174210431 GGCAT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156229677 5 + 157873769 GATGT i nomLeu3.chr3 N 0 C 0 s rheMac3.chr4 168045795 5 + 169853907 GGTGT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169001690 5 - 170955103 GGTGT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163813635 5 + 165299245 GATGC i papAnu2.chr4 N 0 C 0 a score=112639.000000 s hg38.chr6_KB021644v2_alt 193 50 + 185823 CACTGAATTCCATGCTGGGGGAAAATGCCTGCAGGTAGCTCTTCTGGGCA s panTro4.chr6 170613733 50 + 172623881 CACTGAATTCCATGCTGGGGGAAAATGCCTGCAGGTGGCTCTTCTGGGCA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172360778 50 + 174210431 CACTGAATTCCATGCTGGGAGGAAATGCCTGCAACTGGCTCTTCTGGCTG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156229682 50 + 157873769 CACAGAATTCCATGCTGGGAGGAAGTGTCTGCAGCTGGCTCTTCTGGGCA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168045800 50 + 169853907 CACTGAATTCCATGCTGGGGGGAAACACCTGCAGCTGGCTCTTCTGGGCA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169001695 50 - 170955103 CACTGAATTCCATGCTGGGAGGAAACGCCTGCAGCTGGCTTTTCTGGGCA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163813640 50 + 165299245 CACTGAATTCCATGCTGGGAGGAAACCCCTGCAGCTGGCTCTTCTGGGCA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96597829 50 + 98384682 CACTGAATTCCATGCTGGGAGGAAACGCCTGCGGCTGGCTCTTCTGGGTG i chlSab2.chr13 N 0 C 0 a score=1388680.000000 s hg38.chr6_KB021644v2_alt 243 564 + 185823 TCACTGAATTCCATGCT-GGGAGGAAATGCCTGCAGCTGGCTCTTCTGGGCC---AGCAGGTCCGGCTGCCCTCCTGcttatcatcatctgacattgaataaagtttgcttatttattttgatcaagctctgtggagcagagattgttgcctgttttgttcagtgctgcatcttctatgtctaaaataatgcctTCCTTGAACTATTTGATGGATCAGGGGTGTGGAAAGCTCTATGGTTTGCCTGGCCACGTGAGGGGGACTTCATCTGCATTTCCATGAAGCTGGAGGATGAAGGTGGGAAGACGGGTGTCTGCTTCATGTTCATGCTACTCATGAAAACAACGACCAACACAGAAGATGAAAAGGACGTACAAAGTAATGAAACTGATAACCAAG-----GGATAAGAGAGACATAATAATCACCACATGGACACGCCTAAGTGCAGGTCGAAGCAC-CAGAATTCCAATTCTGTGATCATAGCCATGGTAATAACTTTGAGGCAGGCTCCATTTTGAAACATAAATAAACAGAAAAATGAATAGCTCTTCCTGTCAACAGGGTTGCTCTC s panTro4.chr6 170613783 564 + 172623881 TCACTGAATTCCATGCT-GGGAGGAAATGCCTGCAGCTGGCTCTTCTGGGCC---AGCAGGTCCGGCTGCCCTCCTGcttatcatcatctgacattgaataaagtttgcttatttattttgatcaagctctgtggagcagagattgttgcctgttttgttcagtgctgcatcttctatgtctagaataatgcctTCCTTGAACTATTTGATGGATCAGGGGTGTGGAAAGCTCTATGGTTTGCCTGGTCACGTGAGGGGGACTTCATCTGCATTTCCATGAAGCTGGAGGATGAAGGTGGGAAGACGGGTGTCTGCTTCATGTTCATGCTACTCATGAAAACAACGACCAACACAGAAGATGAAAAGGACATACAAAGTAATGAAACTGATAACCAAG-----GGATAAGAGAGACATAATAATCACCACCTGGACACGCCTAAGTGCAGGTCGAAGCAC-CAGAATTCCAATTCTGTGATCATAGCCGTGGTAATGACTTTGAGGCAGGCTCCATTTTGAAACATAAATAAACAGAAAAATGAATAGCTCTTCCTGTCAACAGGGTTGCTCTC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172360828 562 + 174210431 TCACTGAATTCCATGCT-GGGAGGAAATGCCTGCAGCTGGctcttctgggcc---agcaggtctggctgccctcctgcttatcatcatctgacattgaatgaagtttgcttatttattttgatcaagctctgtggagcagagattgttgcctgttttgttcagtgctgcatcttctatgtctaaaataatgcctTCCTTGAACTGTTTGATGGATCAGGGGTGTGGAAAGCTCTATGGTTTGCCTGGCCACGTGAGGGGGACTTCATCTGCATTTCCATGAAGCTGGAGGATGAAGATGGGAAGACGGGTGTCTGCTTCATGTTCATGCTGCTCATGAAAACAACGACCAACACAGAAGATGAAAAGGACGTACAAAGTAATGAAACTGATAACCAAG-----GGATA--AGAGACATAATAATCACCATATGGACACGCCTAAGTGCAGGTTGAAGCAC-CAGAATTCCAATTCTGTGATCATAGCTATGGTAATGACTTTGAGGCAGGCTCAATTTTGAAACATAAATAAACAGAAAAATGAATAGCTCTTCCTATCAGCAGAGATGCTCTC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156229732 564 + 157873769 TCACTGAATTCCATGCT-GGGAGGAAATGCCTGCAGCTGGCTTTTCTGGACC---AGCAGGTCCAGCTGCCCTCCTGcttatcatcatctgacattgaataaggtttgcttatttattttgatgaagctctgtggagcagagattgttgcctgttttgttcagtgctgcatcccctgtgtgtaaaataacgcttTCCTTGGACTATTTGATGGATCAGGGGTGTGGAAAGCTCTATGGTTTGCCTGGCCATGTGAGGGGGACTTCATCAGCATTTCCATGAAGCTGGAGGATGAAGGTGGGAAGACGGGTGTCTGCTTCATGTTCATGCTGCTCATGAAAACAACGACCAACACAGAAGATGAAAACGACATACAAAGTAACTAAACTGATAACCAAG-----GGATAAGAGAGACCTAATAATCACCATGTGGACACGCCTAAGTGCAGGTTGAAACAC-CAGAATCCCAATTCTGTGATCATAGCTATGATAATGGCTTTGAGGCAGGCTCAATTTTGCAACATAAATAAACAGAAAAATGAGTAGCTCTTCCTATCAACAGAGATGCTCTC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168045850 564 + 169853907 TCACTGAATTCCATGCT-GGGGGTAAACGCCTGCAGCTGGCTTTTCTGGGCC---AGCAGGTTCAGCTGCCCTCCTGcttatcatcatctgacattgaataaagtttgcttatttattttgatcaagctctgtggagcagagattgttgcttgttttgttcagtgctgcatcctctatgtctaaaataatgcctTCCTCGAACTATTTGATTGATCAGGGGTGTGGAAAGGTATATGATTTGCCTGGCCACGTGAGGGGGACTTCATCTGTGTTTCCATGAAATGGGAGGATGAAGGTGGGAAGATGGGCATCTGCTTCATGTTCATGCTACTCATGAAAACAACGGCCAACACAGAAGATGAGAAGGACGTACAAAGTAATTAAACTGATAACCAAG-----GGACAAGAGAGACATAATAATCACCGAGGGGACATGCCTAAGTGCAGGTCAAAGCAC-CAGAATTCCAATTCTGTGATCATAGCTATGGTAATGAGTTTGAGGCAGGCTCAACTTTGAAACATAAATAAACAGAAAAATGAATAGCTCTTCCTATCAACAGAGATGCTTTC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169001745 564 - 170955103 TCACTGAATTCCATGCT-GGGGGGAAATGCCTGCAGCTGGCTTTTCTGGGCC---AGCAGGTTCAGCTGCCCTCCTGcttatcatcatctgacattgaataaagtttgcttatttattttgatcaagctctgtggagcagagattgttgcttgttttgttcagtgctgcatcctctatgtctaaaataatgcctTCCTCGAACTATTTGATTGATCAGGGGTGTGGAAAGGTATATGATTTGCCTGGCCACGTGAGGGGGACTTCATCTGTGTTTCCATGAAATGGGAGGATGAAGGTGGGAAGATGGGCATCTGCTTCATGTTCATGCTACTCATGAAAACAACGGCCAACACAGAAGATGAGAAGGACGTACAAAGTAATTAAACTGATAACCAAG-----GGACAAGAGAGACATAATAATCACCGAGGGGACATGCCTAAGTGCAGGTCAAAGCAC-CAGAATTCCAATTCTGTGATCATAGCTATGGTAATGAGTTTGAGGCAGGCTCAACTTTGAAACATAAATAAACAGAAAAATGAATAGCTCTTCCTATCAACAGAGATGCTTTC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163813690 565 + 165299245 TCACTGAATTCCATGCTgggggggAAATGCCTGCAGCTGGCTTTTCTGGGGC---AGCAGGTTCAGCTGCCCTCCTGCTTATCATCATCTGACATTGAATaaagtttgcttatttatttcgATGAAGCTCTGTGGAGCAGAGATTGTTGCTTGTTTTGTTCAGTGCTGCATCCTCCATGTCTAAAATAATGCCTTCCTCGAACTATTTGATTGATCAGGGGTGTGGAAAGGTATATGATTTGCCTGGCCACGTGAGGGGGacttcatttgcatttccatgaaaCGGGAGGATGAAGGTGGGAAGATGGGCGTCTGCTTCATGTTCATGCTACTCGTGAAAACAACGGCCAACACAGAAGATGAGAAGGACGTACAAGGTAATTAAACTGATAACCAAG-----GGACAAGAGAGACATAATAATCACTGAGGGGACATGCCTAAGTGCAGGTCAAAGCAC-CAGAATTCCAATTCTGTGATCATAGCTGTGGTAATGAGTTTGAGGCAGGCTCAACTTTGaaacataaacaaacagaaaaatgaatagcTCTTCCTATCAACAGAGATGCTTTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96597879 563 + 98384682 TCACTGAATTCCATGCT-GGGGGGAAATGCCTGCAGCTGACTTTTCTGGGCC---AGCAGGTTCAGCTGCCCTCCTGcttatcatcatctgacattgaataaagtttgcttatttatttcgatcaagctctgtggagcagagattgttgcttgttttgttcagtgctgcatcctctatgtctaaaataatgcctTCCTCAAACTATTTGATTGATC-GGGGTGTGGAAAGGTATACGATTTGTCTGGCCACCTGAGGGGGACTTCATCTGCGTTTCCATGAAACGGGAGGATGAAGGTGTGAAGATGGGCGTCTGCTTCATGTTCATGCTACTCGTGAAAACAACGGCCAACACAGAAGATGAAAAGGACGTACAAAGTAATTAAACTGATAACCAAG-----GGACAAGAGAGACATAATAATCACCAAGGGGACACGCCTAAGTGCAGGTCAAAGCAC-CAGAATTCCAATTCTGTGATCACAGCTATGGTAATGACTTTGAGGCAGGCTCAACTTTGAAACATAAATAAACAGAAAAATGAATAGCTCTTCCTATCGACAGAGATGCTTTC i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56096792 474 + 122678785 tcactgaacccgaagct-ggggaAGTCCGCCCA----------TTCCACACCCTAAGCCGAGGCAACTCAGCTCCTTCCTGTCACC--CCGACATTGCTCATCATTTCCTTCCTTCCTCT----AAGGTCCGTGGAGAACAGATTCTCTTCTGTTTGGTTCACAGCTGGATGCCCCATGTCTTGATAAACACCTGC------------GAGTGAAC---GGTGTTGACAGACCTGGTGTCCTCCTGGCCCCCGGGCCGTGAACTCCTC---ATTTCCCTAAAGCCAGAGTGGGAAGGTGGGGGAA---ACGTCTG-------------------GTGAAAAAAGTGGACTGCACAGTGGG--------------AGGGCAAGTGCACTGACCAAGAAGATGGTGCAGAAAGTGGACCTGACAGTC-----GAGAAAGTACCT---TGCCCCCCGAGTCTCTCAGAACTCCAAAACTGTGACTCTAGTGTTGACGGTAACCTTGACACATACACCA-TTTGGAACACAAATACATGGAAAAGTGAATAGCTTTCC-------------------- i canFam3.chr1 N 0 C 0 a score=1809841.000000 s hg38.chr6_KB021644v2_alt 807 575 + 185823 CACACTCTTGTACATAAA-GAATGGTGATCTTTCACTCGGAAGAGCCAGCAAGGGATGACCCAGGAAATTGCACTGAG----AAAACTT-GCAGCTTCTATGAAAATAAAATTAAATAGATATTTAATTCCATTCTTC-----AAATCCCAAACCTAGATCAAAA-GAAGACCTTTCAAGAATCAGACAC--AGATGTGAGAGAATAATCATCTTAAATCAAGAT-GTAGAATTTCCCAAGTAAAATCTCAGAAAATGAAAAGAGAAGTATTTATAAATATTATTTTATAAACAAAAAGTTGTATGTTTAAACTTTATAGAGCAAATTAAATTAAAAATAATAACTGGAAATAACCTTCAATAAT------ACTT-AATAAGTAACATATACCAACCAATAAAAACAGTAAAATTGCTTT-aaaacttgacaaatgacatgaataaaatatttgcagaaaagg-------ataagtcaaaatggct----------aaatccatgtcaaaatgtgcagaataatataatcttatactg-tttcacctatcaaattagcaaataattttaaaagttctattcctcatagccggtgtgcatatgctgagagaagtcc------t s panTro4.chr6 170614347 576 + 172623881 CACACTCTTGTACATAAA-GAATGGCGATCTTTCACTCGGAAGAGCCAGCAAGGGAAGACCCAGGAAATTGCACTGAG----AAAACTT-GCAGCTTCTATGAAAATAAAATTAAATAGATATTTAATTCCATTCTTC-----AAATCCCAAACCTAGATCAAAA-GAAGACCTTTCAAGAATCAGACAC--AGATGTGAGAGAATAATCATCTTAAATCAAGAT-GTAGAATTTCCCAAGTAAAATCTCAGAAAATGAAAAGAGAAGtatttataaatattattttataaaCAAAAAGTTGTATGTTTAAACTTTATAGAGCaaattaaattaaaaataataaCTGGAAATAACCTTCAATAAT------ACTT-AATAAGTAATATATGCCAACCAATAAAAACAGTAAAATTGCTTT-GAAACTTGACAAATGACGTGAATAAAATATTTGCAGAAAAGG-------ATAAGTTAAAATGGCT----------AAATCCATGTCAAAATGTGCAGAATAATATAATCTTATACTG-tttcacctatcaaattagcaaataattttaaaagttctattcctcatagccggtgtgcatatgctgagagaagtcc-----tt i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172361390 574 + 174210431 CACGCTCTTGTACATAAA-GAATGGTGATCTTTCACTCGGAAGAGCCAGCAAAGGATGACCCAGGAAATTGCACTGAG----AAAACTT-GCAACTTCTGTGAAAATAAAATTAAATAGATATTTAATTCCATTCTTC-----AAATCCCAAACCTAGATCAAAA-GAAGACCTTTCAAGAATCAGACAC--AGATGTGAGAGAATAATAATCTTAAATCAAGAT-GTAGAATCTCCCAAGTAAAATCTCAGAAAATGAAAAGAGAAGtatttataaatattattttataaaCAAAAAGTCGTATATTTAAACTTTATAGAGCAAATTAAATTAAAAACAATAACTGGAAATAACCTTCAATAAT------ACTT-GATAAGTAACATATACCAACCAATAAAAATAGTAAAATTGCTTT-AGAACTTGACAAATGACATGAATAAAATATTTGCAGAAAAGG-------ATAAGTCAAAATGGCT----------AAATCCATGTCAAAATGTGCAGAATAATATAATCTTATACTG-TTTCGCCTATTAAATTAGCAAATAGTTTTAAAAGTTCTATTCCTCATAGCTGGTGTGCATATGGTGAGAGAAGTCC------- i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156230296 576 + 157873769 CACACTCTTGTACATAAA-GAACGGCGATCTTTCACTCGGAAGAGCCAGCAAAGGATGACCCATGAAATTGCACTGAG----AAGACTT-GCAACTTCTGTGAAAATAAAATTAAATAGATATTTAATTCCCTTCTTC-----AAATCCCAAACCTAGATCAAAA-GAAGACCTTTCAAGAATCAGACAC--AGATGTGAGAGAATAATAATCTTAAATCAAGAT-GTAGAATTTCCCAAGTAAAATCTCAGAAAATGAAAAGAGAAGTATTTATAAATATTACTTTATAAACAAAAAGTTGTACGTTTAAACTTTATAGAGCAAATTAAATTGAAAACAATAACTGCAAATAACCTTCAATAAT------ACTT-AATAAGTGACATATACCAACCAATAAAAATAGTAAAATTGCTTT-AAAACTTGACAAATGACATGAATAAAATATTTGCAGAAAAGG-------ATAAGTCAAAATGGCT----------AAATCCAGGTCCAAATGTGCAGAATAATATAATCTTATACTG-tttcacctatcatattagcaaataattttaaaagttctattcctcatagctggtgtgcatatggtgagagaagtac-----tt i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168046414 587 + 169853907 CACACTCTTGTATGTAAA-GAATGGCGATCTTTCTCTCGGAAGAGCCAGCAAAGGATGACCCAGGAAATTGTACTGAT----AAAACTTGGCAACTTCTATGAAAATAAAATTAAATAGATATTTAATACCATTCTTC-----AGATCCCAAACCTAGATCAAAA-GAAGACCTTTCAAGAATCAGACAC--AGATGTGAGAGAATAATAATCTTGAATCAAGAT-GTAGAATTTCCCAAGTAAAATCTCAGAAAATGAAAAGAGaaatatttataaatattattttataaaCAAAAAGTTGTATGTTTCAACTTCATAGAGCAAATTAAATTAAAAATGATAACTGGAAATAA-CTTTAATAATACTTAAACTT-AATAAGTAACATATACCAACCAATAAAAATAGTAAAATTGCTTT-AAAACTTGACAAACGACATGAATAAAATATTTGCAGACAAAG-------ATAAGTCAGAATGGTT----------AAATCTATGTCAAAATGTGCAGAATAATATAATCTTATACTG-tttcacctatcaaattagcaaataattttaaaagttctattcctcagagctggtgtgcacatggtgagacaagtactttactt i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169002309 582 - 170955103 CACACTCTTGTATGTGAA-GAATGGCGATCTTTCTCTCGGAAGAGCCAGCAAAGGATGACCCAGGAAATTGTACTGAT----AAAACTTGGCAACTTCTATGAAAATAAAATTAAATAGATATTTAATACCATTCTTC-----AGATCCCAAACCTAGATCAAAA-GAAGACCTTTCAAGAATCAGACAC--AGATGTGAGAGAATAATAATCTTGAATCAAGAT-GTAGAATTTCCCAAGTAAAATCTCAGAAAATGAAAAGAGAAATATTTATAAATATTATTTTATAAACAAAAAGTTGTATGTTTCAACTTCATAGAGCAAATTAAATTAAAAATGATAACTGGAAATAACCTTTAATAAT------ACTT-AATAAGTAACATATACCAACCAATAAAAATAGTAAAATTGCTTT-AAAACTTGACAAACGACATGAATAAAATATTTGCAGACAAAG-------ATAAGTCAGAATGGTT----------AAATCTATGTCAAAATGTGCAGAATAATATAATCTTATACTG-tttcacctatcaaattagcaaataattttaaaagttctattcctcatatctggtgtgcacatggtgagacaagtactttactt i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163814255 582 + 165299245 CACACTCTTGTATGTGAA-GAATGGCGGTCTTTCTCTCGGAAGAGCCAGCAAAGGATGACCCAGGAAATTGTACTGAT----AAAACTTGGCAacttctatgaaaataaaattaaatagatatttaataCCATTCTTC-----AGATCCCAAACCTAGATCAAAA-GAAGACCTTTCAAGAATCAGACAC--AGATGTGAGAGAATAATAATCTTGAATCAAGAT-GTAGAATTTCCCAAGTAAAatctcagaaaatgaaaagagaaatatttataaatattattttataaacaaaaagttgTATGTTTAAACTTCatagagaaaattaaattaaaaacaataactgGAAATAACCTTTAATGAT------ACTT-AATAAGTAACATATACCAAccaataaaaatagtaaaattgctTT-AAAACTTGACAAAcgacatgaataaaatatttgcagacaaGG-------ATAAGTCAGAATGTTT----------AAATCCATGTCAAAATGTGcagaataatataattttatactg-tTTCACCTATcaaattatcaaataattttaaaagttctattcCTCATAGCTGCTGTGCACATAGTGAGACAAgtactttactt i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96598442 581 + 98384682 CACACTCTTGTACGTGAA-GAATGGCGATCTTTCTCTCGGAAGAGCCGGCAAAGGATGACCCAGGAAATTGTACTGAT----AAAACTTGGCAACTTCTATGAAAATAAAATTAAATAGATATTTAATACCATTCTTC-----AGATCCCAAACCTAGATCAAAA-GACGACCTTTCAAGAATCAGACAC--AGATGTGAGAGAATAATAATCTTGAATCAAGAT-GTAGAATTTCCCAAGT-AAATCTCAGAAAATGAAAAGAGAAATATTTATAAATATTATTTTATAAACAAAAAGTTGTATGTTTAAACTTCATAGAGAAAATTAAATTAAAAACAATAACTGGAAATAACCTTTAATGAT------ACTT-AATAAGTAACATATACCAACCAATAAAAATAGTAAAATTGCTTT-AAAACTTGACAAACGAGATGAATAAAATATTTGCAGACAAGG-------ATAAGTCAGAATGGTT----------AAATCCGTGTCAAAATGTGCAGAATAATATAATTTTATACTG-tttcatctatcaaattatcaaataattttaaaagttctgttcctcatagctggtgtgcacatagtgagacaagtactttactt i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169802704 571 + 171630274 CACACTCTTGCACATGAA-GAATGGCGATCTTCCACTGGGAAGACCCAGCAAAGGATGA-CCAGAAAATCGCACTGAG----AAAACTCGGGTTCCTCTATGAAAATAAAATTAAACATCTAATAAATACCACTCATC-----AAACCCCGAACCTAGATCAAAA-GAAGACCTTTAAAGAACCAGACAC--AGATGTGAGAGAATAATAATATTAAAACAAGAT-GTAGGATTTCCCAAGTAAAATCTCAGAAAGCAAAAAGAGaaatatttataaattttattttGTAAACAAAAACTTATATCTTTAAACTTTATGGAGAAAATTAAATTAAAATCAAAAACAGGAAATAACCTTCAATAAT------ACTT-AATAAGTAACATACACCAGCCAATAAAAATAGTACAACTGCATT-AAAACTTGACAAATGGCGTGAATGAAGTGTTTGCAGAAAAGG-------A-AAGTCGAAATGCCT-----------AATTCATATCAAAATGCGCAGAATAATATAATCTTACGCTG-TTTCGCCT-CCAAGTTAGCAAATAATTTTACAAGCTCTAATCCTCATGGCGACTGAGCATATG-TGAGACAAGCTCT------ i calJac3.chr4 N 0 I 907 s canFam3.chr1 56097266 596 + 122678785 ---------ATATATAAAGGAGTGGTTATATTTCACCCAGGCGGTTCAGGGAAGGATTACTTTAGAAATCGTGCCAAGAAAAAAAAAATGACTGTTTACACAAAAATAAAATTAAATACGTATTTAATACCGTTCTTCAAAATAAACTCCAGGTTGAGATCAAAAGGAAAACCTTTTAAGAATTGGACACATAAATGTGGGAGAATAAGAATCTTAAGTTGAGATAGAAAAACTTTGCAAGTATAAATTCAAGAAATAGTAAGGTAAATATTGGTCAGTTTAATTTTTTAAACAAAACATTATATATGTAAACTTTATAGAACAAGTTAAGGTGTAAA----AACTGGGAATAATGTTAACTAGT------ACTTCAATGAGTAACATCTAACAACCAGT-AAGCCAGTAAAATTGCATGAAAAACATGCTAATAAATGTGAGTAAAATATTCAGAAAAAATGGGCATAAATGACTCCATATTGTTAAAAAAATAAAAATCAGGGTCAAATTGCTCTGAAAAATGCAATCTAATACTGCTTTTACCTAT---ATCAGCAAATAATTTAAAAAGTCAAATTCATTGGAGCTGGTGTGCATATATCAAGGCAGGCATTTCT--- i canFam3.chr1 C 0 C 0 a score=3276.000000 s hg38.chr6_KB021644v2_alt 1382 1 + 185823 t s panTro4.chr6 170614923 1 + 172623881 t i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172361964 1 + 174210431 T i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156230872 1 + 157873769 t i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168047001 1 + 169853907 t i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169002891 1 - 170955103 t i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163814837 1 + 165299245 t i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96599023 1 + 98384682 t i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56097862 1 + 122678785 T i canFam3.chr1 C 0 C 0 e calJac3.chr4 169803275 907 + 171630274 I a score=346624.000000 s hg38.chr6_KB021644v2_alt 1383 113 + 185823 ttttttcctgtggg-aagcttaattgataggaaaataattaattgaaaaataatttgacagtatgtaccaattttctttaaaatagtcatattctgg----ctgggca---cagtggctca s panTro4.chr6 170614924 113 + 172623881 ttttttcctgtggg-aaacttaattgataggaaaataattaattgaaaaagaatttgacaatatgtactaattttctttaagatagtcatattctgg----ctgggca---cagtggctca i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172361965 113 + 174210431 TTTTTTTCTGTGGG-AAACTTAGTTGATAGGAAAATAATTAATTGAAAAATAATTTGACAATAGGTACCAATTTTCTTTAAAATAGTCATATTCTgg----ctgggca---cggtagctca i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156230873 113 + 157873769 tttttttctgtggg-aaacttaattgataggaaaataattaactgaaaaataatttgacaatacgtaccaattttctttaaaatagtcatattctgg----ctgggca---cagtggctca i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168047002 113 + 169853907 ttcttttctgtggg-aaacttaattgataggaaaataattaattgaaaaacaatttgacaatatgtaccaattttctttaaaatagtcatattctgg----ctgggta---cagtggctca i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169002892 113 - 170955103 ttcttttctgtggg-aaacttaattgataggaaaataattaattgaaaaacaatttgacaatatgtaccaattttctttaaaatagtcatattctgg----ctgggta---cagtggctca i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163814838 113 + 165299245 ttcttttctgtggg-aAACTTAATTGATAGGAAaataattaattgaaaaataatttgataatatgtaccaattttctttaaaatagtcatattctgg----ctgggta---cagtggctca i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96599024 113 + 98384682 ttcttttctgtggg-aaacttaattgataggaaaataattaattgaaaaataatttgacaatatgtaccaattttctttaaaatagtcatattctgg----ctgggca---cagtggctca i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169804182 101 + 171630274 TTTATTTCTGTGGG-AAGCTTAATTGATAGAAAAATATTTAATTGAGAAATAATTTGACAATATGTACCAAGTTTCTTTAAAATTGTCATATTC-------------------gtggctta i calJac3.chr4 I 907 C 0 s canFam3.chr1 56097863 107 + 122678785 -CATTTTCTGGGGGAAAACGTGATTGATATG-----CTCTTTCTGGAAAATAA--------AACGTGCCAATGTCCTTTAAAATAGTGATACTCAgggaacctgggtggctcagtggttga i canFam3.chr1 C 0 I 182 a score=678698.000000 s hg38.chr6_KB021644v2_alt 1496 251 + 185823 cgtctatactcccaacactttgggaggcctaggtgggtgaatccctttagcccaggagttggagaccagcccaggcaacatggcaaaaccctgtctctacaaaaaata-aaaa-attagctggatgtggtggcatgcctgtagtcctggctactcaggaggctggggtgggaggatcgcttgaacccaggaagtcgagactgcagtgagcagtgatcacacc--------------------acggagtgagactctgtctcaaaattttttt s panTro4.chr6 170615037 251 + 172623881 cgtctatactcccaacactttgggaggcctaggtgggtgaatccctttagcccaggagttggagaccagcccgggcaacatggcaagaccctgtctctacaaaaaata-aaaa-attagctggatgtggtggcacgcctgtagtcctggctcctcaggaggctgaggtgggaggatcccttgaacccaggaagtcgagactgcagtgagcagtgatcacacc--------------------acggagtgagactctgtctcaaaattttttt i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172362078 251 + 174210431 cgtctatacttccaacactttgggaggcctaggtgggtgaatccctttagcccaggagttcaagaccagcctgggcaacatggcaaaaccctgtctccacaaaaaata-aaaa-attagctgggtgtggtggcatgcctgtagttccggctactcaggaggctgaggtgggaggatcgcttgaacccaggaagtcgagaccgcagtgagcagtgatcacacc--------------------acggagtgagactctgtctcaaaaTTTGTtt i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156230986 251 + 157873769 tgtctatactcccaacactttgggaggcctaggtgggtgaatccctttagcccaggagttcgagaccagcccgggcaacatggcaaaacgctgtctttacaaaaaata-aaaa-attagctgggtgtggtggcatgcctgtagtcccagctactcaggaggctgaggtgggaggatagcttgaacccaggaagtcgagactgccgtgagcagtgatcacacc--------------------acggagtgagactctgtctcaaaattttttt i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168047115 268 + 169853907 agtccataatcccaacactttgggaggcccaggtgggtggatccttttagcccaggagttcgagaccagcccgggcaacatggcaaaaccctgtctctataaaaaatacaaaa-attagctgggcgtggtggt--gcctgtagtcctggctactcaggaggctgaggtgagagaattgcttacacccaggaagtcgagactgcagtgagcagtgatcataccactgcacttcagtctggatgacagagtgagactctgtctcaaaatt--ttt i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169003005 268 - 170955103 agtccataatcccaacactttgggaggcccaggtgggtggatccttttagcccaggagttcgagaccagcccgggcaacatggcaaaaccctgtctctataaaaaatacaaaa-attagctgggcgtggtggt--gcctgtagtcctggctactcaggaggctgaggtgagagaattgcttgcacccaggaagtcgagactgcagtgagcagtgatcataccactgcacttcagtctggatgacagagtgagactctgtctcaaaatt--ttt i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163814951 268 + 165299245 agtccataatcccaacactttgggaggcctaggtgggtggatccctttagcccaggagttcgagactagcgcgggcaacatggcaaaaccctgtctctataaaaaatacaaaa-attagctgggcgtggtggc--gcctgtagtcctggctactcaggaggctgagatgagagaattgcttgcacccaggaagTCGAGAcggcagtgagcagtgatcacaccactgcacttcagtctggatgacagagtgagtctctgtctcaaaatt--ttt i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96599137 268 + 98384682 agtccataatcccaacactttgggaggcctaggtgggtggatccctttagcccaggagttcgagactagcccgggcaacatggcaaaaccctgtctctataaaaaatacaaaa-atgagctaggcgtggtggc--gcctgtagtcctggctactcaggaggctgaggtgagagaattgcttgcacccaggaagtcgagactgcagtcagcagtgatcacaccactgcccttcagtctggatgacagagtgagtctctgtctcaaaatt--ttt i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169804283 263 + 171630274 tgcctgtaatcccaactctttggggggcccgggtgggtgaatcccttcctctcaggggtttgagacaggcccagacaatatgataaaaccctgtctctacaaaaaatacaaaacattagctcggcacggtggcatgcctgtcgtcctaggtactcaggaggtggagttgggagaatcacttgaacccaggaggctgggactgcagtgaactgtggtcactcc----------attgtggattacagagcgacactctgctcaGGAATTgtttt i calJac3.chr4 C 0 C 0 e canFam3.chr1 56097970 182 + 122678785 I a score=2062288.000000 s hg38.chr6_KB021644v2_alt 1747 719 + 185823 aaaaagtcattttctttaggctaatcatctcacttttagaaacctatccaaataaaatagtgataaatgaagaaaagtatgagaatacacaaagatattcattataacattatttataatagaactaattttgagaga-atataaatgcctaaccttaggataatattaaataaattattccattttcatattattggagagagtaaatattaaaactgatataaacaaagaacttttaatattgtaggaacattctcatgaacataatagtaagcttaaaaagtcaagatacaaacctatacatgcagtaCAGCCTCATTTATAATATTGAACCAAAGAAAAGACATTCACCCAATTATCAACAGCAA--ATAATAGAGTCAAGAAGTGTATGCATAATCTTTATTTTCTTCTTTGCTGCTGTGTGGTTTTCTATAAGGAACATTTTTATGCTTTTAATCAGAAACACAGGGTGAGAGTGAGAAAGTGCTCTATGAACGTCCAGCGTCAGGCTGGGCATTGGCCGCTTCTCAG-------CCCTGGCAGTGCTGGGGGTGAGCCG---CGGGCTCCGGCCTCCACTTTCTCTGACAAATGCCTTA------GTGACtgccatgagctgcattgtgcccccc---aaaatttatg--------ttgacaccccag-cctccagtgtttcaaagtgtgact-tatttgaagaccaag-cctcacgtagatgattacgttaaaacaaggtcctt s panTro4.chr6 170615288 719 + 172623881 taaaagtcattttctttagcctaatcatctcacttttagaaacctatccaaataaaatagtgataaatgaagaaaagtatgagaatacacaaagatattcattataacattatttataatagaactaattttgagaga-atataaatgcctcaccttaggagaatattaaataaattattccattttcatattattggagagagtaaatattgaaactgatataaacaaagaacttttaatattgtaggaacattctcatgaacataatagtaagcttaaaaagtcaagatacaaaactatacatgcagtGCAGCCTCATTTATAATATTGAACCAAAGAAAAGACATTCACCCAATTATCAACAGCAA--ATAATAGAGTCAAGAAGCATATGCATAATCTTTATTTTCTTCTTTGCTGCTGTGTGGTTTTCTATAAGGAACATTTTTATGCTTTTAATCAGAAACACAGGGTGAGAGTGAGAAAGTGCTCTATGAACGTCCAGCGTCAGGCCAGGCGTTGGCCACTTCTCAG-------CCCTGGCAGCGCTGGGGGTGAGCCG---CGGGCTCCGGCCTCCGCTTTCTCTGACAAATGCCTTA------GTGACtgccatgagctgcattgtgcccccc---aaaatttatg--------ttgacaccccag-cctccagtgtttcaaagtgtgact-tatttgaagaccaag-cctcacgtagatgattaagttaaaacaaggtcctt i panTro4.chr6 C 0 I 372 s ponAbe2.chr6 172362329 717 + 174210431 aaaaagtcattttctttagcctaatcatctcacttttagaaacctatccaaataaaatagtgataaatgaagaaaagtatgag-atacacagacatgttcactataacattatttataatagaactaattttgagaga-atataaatgcctaatcttaggagaatattaaataaattattccgttttcatattattggagagagtaaatattaaaactgatataaacaaagaaattttaatattgtaggaacattctcatgaacataatagtaagcttaaaaagtcaagatacaaaactatacatgcagtatagcctcatttATAATATTGAACCAAAGAAAAGACATTCACCC-ATTATCAACAGCAA--ATAATAGAGTCAAGAAGTTTATGCGTAATCTTTATTTTCTTCTTTGCTGTTGTGTGGTTTTCTATAGGGAACATTTTTATGCTTTTGATCAGAAACGCAGGGTGAGAGTGAGAAAGTGCTCTATGAATGTTCAGCGTCAGGCCAGGCGTTGACCGCTTCTCAG-------CCCTGGCAGTGCTGGGGGTGAGCCG---TGGGCTCTGGCCTCCACTTTCTCTGACAAACGCCTTA------GTGACtgccatgagcggcactgtgcccccc---aaaatttgtg--------ttgacaccccag-cctccagtgtttgaaagtgtgact-tctttggagaccaag-cctcatgtagatgattacgttaaaacaaggtcctt i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156231237 718 + 157873769 aaaaagtcattttctttagcctaatcatctcacttttagaaacctatccaaataaaatagtgataaatgaagaaaagtatgagaatacacaaagatactcattataacattacttataatagaactaattttgagaga-ctataaatgcctaaccttaggagaatattaaataaattgttccgttttcatattactggagagagtaaatattaaaactgatacaaacaaagaacttttaatattgtaggaacattctcatgaagataataggaagcttaaaaagtcaagatacaaaactatacatgcagtatagcctcatttATAATATTGAACCAAAGAAAAGACACTCAGCC-ATTATCAACAGCAA--ATAATGGAGTCAAGAAGTGTATGCGTAATCTTTATTTTCTTCTTTGCTGCTGTGTGCTTTTCTATAAGGAACATTTTTATGCTTTTAATCAGAAATGCAGGGTGAGAGTGAGAAAGTGCTCCTTGAACGTCCAGCGTTAGGCCAGGCATTGGCCACCTCTCAG-------CCCTGGCAGCGCTGGGGGTGAGTCG---CGGGCTGTGGCCTCCACTTTCTCTGACAAATGCCTTA------GTGACtgccatgagctgcactgtgcccccc---aaaatttatg--------ttgacaccccag-cccccagtgtttcaaaatgtgact-tatttggagaccaag-tctcatgtagatgattaagttaaaacaaggtcctt i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168047383 735 + 169853907 aaaaagtcattttctttagcttaataatcttacttttagaaacctatccaaataaaatagtgataaatgaagaaaactatgagaatacacaaagatatttattataatattatttataatataactaattttgagaga-atataaatgcctaaccttaggagaatattaaataaactattctgttttcatattattggagagagt-aacattaaagctgatatatacaaagaacttttaatattgtaggaacattctcatgaacataatagtaaggttaaaaagtcaagatacaaaactctacatgcagtatAGGCTCATTTATAATATTGAGCTAAAGAAAAGGCATTCACCC-ATTATCAACAGCAA--ATAATAGAGTCAGGAAGTGTATGCATAATCTTTATTTTCTTCTTTGCTGCTGTGTGGTTTTCTATAAGGAACATTTTTGTACTTTTAATCAGAAACGCAGGGTGAGATTGAGAAAGTGCTGTATGAATGTCCAGCGTCAGGCCAGGCGTTGGGCCCTTCTGCATCTCACTCCCTGGCAGCGCTAGGGGTGAACCA---CAGGCTCTGGCCTCCACATTCTCTGACAGATGCCTTA------GTGACCGCCatgagctgcattgtgccccccac-caaatttatgttgatgccttgataccccaaccccccagtgcttcaaaatgtgact-tatttggaaaccaag-cttcctgtggatgattaagttaaaatgaggtcctg i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169003273 735 - 170955103 aaaaagtcattttctttagcttaataatcttacttttagaaacctatccaaataaaatagtgataaatgaagaaaactatgagaatacacaaagatatttattataatattatttataatataactaattttgagaga-atataaatgcctaaccttaggagaatattaaataaactattctgttttcatattattggagagagt-aacattaaagctgatatatacaaagaacttttaatattgtaggaacattctcatgaacataatagtaaggttaaaaagtcaagatacaaaactctacatgcagtatAGGCTCATTTATAATATTGAGCTAAAGAAAAGGCATTCACCC-ATTATCAACAGCAA--ATAATAGAGTCAGGAAGTGTATGCATAATCTTTATTTTCTTCTTTGCTGCTGTGTGGTTTTCTACAAGGAACATTTTTGTACTTTTAATCAGAAACGCAGGGTGAGATTGAGAAAGTGCTGTATGAATGTCCAGCGTCAGGCCAGGCGTTGGGCCCTTCTGCATCTCACTCCCTGGCAGCGCTGGGGGTGAACCA---CAGGCTCTGGCCTCCACATTCTCTGACAGATGCCTTA------GTGACCGCCatgagctgcattgtgccccccac-caaatttatgttgatgccttgataccccaaccccccagtgcttcaaaatgtgact-tatttggaaaccaag-cttcccgtggatgattaagttaaaatgaggtcctg i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163815219 740 + 165299245 aaaaagtcattttctttagCTTAATAATCTTACTTTTAGAAACCTATCCAAATAAAATAGtgacaaatgaagaaaactaTGAGAATAcacaaagatatttattataatattatttataatataactaATTTTGAGAGA-ATGTAAATGCCTAACCTTAGGAGAATATTAAATAAACTATTCCGTTTTCATATTATTGGAGAGAGT-AACATTAAAGCTGAtatatacaaagaacttttaaTATTGTAGGAACATTCTCATGAACATAATAGTAAGGTTAAAAAGTCAAGATACAAAACTATACATGCAGTATAGCCTCATTTATAATATTGAGCTAAAGAAAAGGCATTCACCC-ATTATCAACAGCAA--CTAATAGAGTCAGGAAGTGTATGCgtaatcttcattttcttctttgctgttGTGTGGTTTTCTATAAGgaacatttttgtacttttaatcaGAAATGCAGGGTGAGATTGAGAAAGTGCTGTATGAATGTCCAGCGTCAGGCCAGGCGTTGGGTCCTTCTGCACCTCACTCCCTGGCAGCGCTGGGGATGAGCCA---TGGGCTCTGGCCTCCACATTCTCTGACAGATGCTCCACATTCTCTGACCGCCATGAGCTGCATTGTGCCCCCCAC-CAAATTTATGTTGATGCCTTGATACCCCAA-CCCCCAGTGCTTCAAAATGTGACT-TATTTGGAGACCAAG-CCTCCCATggatgattaagttaaaatgaggtcctg i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96599405 735 + 98384682 aaaaagtcactttctttagcttaataatcttacttttagaaacctatccaaataagatagtgataaatgaagaaaactatgagaatacacaaagatatttattataacattatttataatataactaattttgagaga-atataaatgcctaaccttaggagaatattaaataaactattctgttttcatattatcagagagagt-aatattaaagctgatatatacaaagaaattttaatattgtaggaacattctcatgaacataatagtaaggttaaaaagtcaagatacaaaactatacatgcagtatAGCCTCGTTTATAATACTGAGCTAAAGAAAAGGCATTCACCC-ATGATCAACAGCAA--CTAATAGAGTCAGGAAGTGTATGCGTAATCTTTATTTTCTTCTTTGCTGCTGTGTGGTTTTCTGTAAGGAACATTTTTATGCTTTTAATCAGAAACGCAGGGTGAGAGTGAGAAAGTGCTGTATGAATGTCCAGCGTCAGGCCAGGCGTTGGGCCCTTCTGCACCTCACTCCCTGGCAGTGCTAGGGGTGAGCCA---CGGGCTCTGGCCTCCACATTCTCTGACAGATGACTTA------GTGACCGCCatgagctgcactgtgccccctccgcaaatttatgttgatgccttgataccccaa-cccccagtgcttcaaaatgtgact-tatttggaaaccaag-cctcccgtggatgattaagttaaaatgaggtcctg i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169804546 676 + 171630274 aaaaggtcgttttctttaatgtgataatttcacttttagaaatctatccaaataaaacagtgataaatgaagaaaactgcgagaatacac--agatagttattataatattatgtatcatagaattaatttcaaaaga-atgtaaatgcctaaccttaggagaatattaaagaaattattccattttcatattattggagagtgtaaatattaaagctgatacatacgaaaaccttttcatattgtggaaacattctcatgaacataatattaagtctcagaagtcaagatacagaactatgcatgcagGTTAGCCTTATTTATGACATTGAACTGAAGACAAGACATTCACCC-ATTATCAACAGAAA--ATCATAGAGTCAGGAAGTGCATGCACAATCTTTCTTTTCTCCTTTGCTCTGGTGTGGTTTTCTGTAAGGAACA---------TTTTAATCAGAAAAGCAGGGTAGGAGTGAGAGAGTGCTGTATGAACA-----------------------------------------CCCTGGAAGTGCTGGGTGTGAGCCTGCCTCAGCTCC-GCCTCCACCTGCCCTGACAAACGCCTTA------GTTACTGCCCtgagctgcactgtgcccccc---aagatttatg--------ttgatgccccaacccccccgtgattcaaagtgtgact-tattcagagagcaga-cctcacataagcaattaagttcaaatgaggccctt i calJac3.chr4 C 0 C 0 s canFam3.chr1 56098152 610 + 122678785 aaatagtga--tactcaactctaatgatcccactcctaggaatctatcccac----------agaaatggagaaaaatatgtgtctgcgctaagatgtgtgttagaacattatttacaatagagctaatttgtaaagacctatgaatgctgcacatcaggagaatgttatgtgaactttacggtatttatgttatggaagagtgtaaatatcaaaactgatatgtacgaaTAAGTCTTCACATTGTAGG----TTCTCATGAACGTCAGGGTGAG-TGAAACAGTAAAGAAACAGAGTTGTGCACGCAG------CTCTCCTGTGACGTTGAACTAAAGGAAGGAAATCCACCA-AATATTAACAGTAATTTTATCAGAGT--GGAATTTGGCACA-AATCTTTGTTGTGCTCTTCACTCTTGTTTGGGT-----------------------CATTACTCAGAAAACTAGTTTAGAGATCAGAAA--ACTGTATGTCCGTTT--------------------------------------CCCTGGCA--------------------CAGT-----GCCTTC-------CCGACGCATGTCTGA------GTCGCTTCTCTGGACCAGACTGTTccc------aaaactcagc------cattgaagcaccat-ctccgaatacctctgtatgtgaccatatgtggagagaaggtctttacagaggagatgaaatc-aaacggggtcctt i canFam3.chr1 I 182 C 0 a score=29308.000000 s hg38.chr6_KB021644v2_alt 2466 13 + 185823 tgagtgggtgcca s ponAbe2.chr6 172363046 13 + 174210431 cgagtgggtgcca i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156231955 13 + 157873769 cgagtgggtgcca i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168048118 13 + 169853907 caagtaggtgcca i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169004008 13 - 170955103 caagtaggtgcca i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163815959 13 + 165299245 CAAGAAGGTGcca i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96600140 13 + 98384682 caagtaggtgcca i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169805222 13 + 171630274 cgagtgggtgccc i calJac3.chr4 C 0 C 0 s canFam3.chr1 56098762 13 + 122678785 caagtacccccca i canFam3.chr1 C 0 C 0 e panTro4.chr6 170616007 372 + 172623881 I a score=1986599.000000 s hg38.chr6_KB021644v2_alt 2479 682 + 185823 atccaatctgactggtgtccttatcagaagcggagattaggatgcacagagagaccctggattcatgtgcaccgagggatgaccatgggaaggcacagcacgaaggcaccatctgcaagccaag--gagaaccccctggaaaaccaa-cctgcccacacccaggtctcagcctccagcc-------tccgtg------------------tctgtggttaaaccatgcagtctgtggtgcttgtcaaggcagccctggcCGACC--GACGGTTTCTGTGATTGGAATTGCTGCCTGTAAATATGAGTGAGAGCCCAGCCGATAGAGATGCATGAGGCCTGCAGAAGCTTGGCACATCGATGGTGCGGTGGCAGAGGTGGTGAGGGTGTTAGCCAGGAACGTGGTCTGCAAGGCAATATTCCTTCGCAAGGCGGGTATTAGAAAAAAGACTGTGCAAGTTGATGTCTACACACAGTGCTGAGCACCTTCA-CGCTG--ATGAACTCTCACCATTCTTGACTGAAGAAACAGGGTGTGATGGGTAATTGGAAAAAGCAAAAACGCTGAACAGGACATCTGTGAAGCATT-GGTTTTAAAGTTGGGAAAATATGAAAAATCCAGACACACCTGTGGAAAGAACATGCCCTGAAGGTACAGGTAAGGCT------------------------AGCCCAGGGAGGGAAGGAGAGAGCCACAGGCA-GGGAGGGCGCAGCCAGCTG- s panTro4.chr6 170616379 680 + 172623881 atccaatctcaccggtgtccttatcagaagcggagattaggatgcacagagagaccctggattcacgtgcaccgagggatgaccatgggaaggcacagcacgaaggcaccatctgcaagccaag--gagaagcccctggaaaaccaa-cctgcccacacccaggtctcggcctccagcc-------tccatg------------------tctgtggttaaaccatgcagtccgtggtgcttgtcaaggcagccctggcCGACC--GACGGTTTCTGTGATTGGAATTGCTGCCTGTAAATATGAGTGAGAGCCCAGCCGATAGAGATGCATGAGGCCTGC-GAAGCTTGGCACATCGATGGTGCGGTGGC-GAGGTGGTGAGGGTGTTAGCCAGGAACGTGGTCTGCAAGGCAATATTCCTTCATGAGGAGGGTATTAGAAAAAAGACTGTGCAAGTTTATGTCTACACACAGTGCTGAACATCTTCA-CACTG--ATGAACTCTCACCATTCTTGACTGAAGAAACAGGGTGTGATGGGTAATTGGAAAAAGCAAAAACGCTGAACATGACATCTGTGAAGCATT-GGTTTTAAAGTTGGGAAAATACGAAAAATCCAGACACACCTGTGGAAAGAACATGCCCTGAAGGTACAGGTAAGGCT------------------------AGCCCAGGGAGGGAAGGAGAGAGCCACAGGCA-GGGAGGGCGCAGCCAGCTG- i panTro4.chr6 I 372 C 0 s ponAbe2.chr6 172363059 684 + 174210431 atccaatctgactggtgtccttatcagaagcggagattaggatgcacagagaggccctggattcacgggcaccgagggatgaacacgggaaggcacagcgcaaaggcaccatctgcaagccaaggagagaagcccctagaaaaccaa-cctgctgacacccaggtctctgcctccagcc-------tccatg------------------tctgtggttaaaccatgcagtctgtggtgcttgtcaaggcagccctggcCGACC--GAC-GTTTCTGTGATTGGAATTGCTGCCTGTAAATATGAGTGAGAGCCCAGCCGATAGAGACGCATGAGGCCTGCAGAAGCTTGGCACATCGATGGTGCAGTGGCGGAGGTGGTGAGGGTGTCAGCCAGGAATGTGGTCTGCAAGGCAATATTCCTTCGCGAGGGGGGTATTAGAAGAAAGACTGTGCAAGTTTACGTATACACACAATGCTGAACATCTTCA-CACTG--ATGAACTCTCACCATTCTTGACTGAAGAAACAGGGCGTGATGGATAATTGGAAAAATTAAAAACGCTGAACACAATATCTGTGAAGCATT-TGTTTTAAAGTTGGGAAAATATGAAAAATCCAGACACACCTGTGGAAAGAACATGCCCTGAAGGTACAGGTAAAACT------------------------AGCCCAGGGAGGGAAGGAGAGAGCTGCAGGCAGGGGAGGGTGCAGCCAGCTA- i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156231968 685 + 157873769 atccaatctgactgctgtccttatcagaagcagagattaggatgcacagagagaccctggattcacgtgcaccgagggatgaccacgggaaggcacaacttgaaggcaccgtctgcaagccaaggagagaggcccctggaaaaccaa-cctgcccacacccaggtctcggcctccagcc-------tccatg------------------tctgtggttcaaccatgcagtctgtggtgcttgtcaaggcagccctggccgact--gaCGGTTTCTGTGATTGGAATTGCTGCCTGTAAATATGAGTGAGAGCCCAGCCGATAGAGATGCATGAGGCCTGCAGAAGCTTGACACATCAATGGTGCGGTGGCGGAGGTGGTGAGGGTGTGAGCCAGGAACGTGGTCTGCAGGGCAATATTCCCTCACGAGGAGGGTATTAGAAAAAAGACTGTGCAAGTTTACATATACACACAATGCTGAACATCTTCA-CACTG--ATGAACTCTCACCGTTCTTGACTGAAGAAATAGGGTGTGATGGATAATTGGAAAAAGCAAAAACGCTGAACACAACATCTGTGAAGCATT-GGTTTTAAAGTTGGGAAAATATGAAAAATCCAGACACACCTGTGGAAAGAACATGCCCTAAAGGTACAGGTAAGGCT------------------------AGCCCagggagggagggagagagctgcaggcaggggagggCGCAGCCAGCTG- i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168048131 712 + 169853907 atccaatctgactggtgtccttatcagacgcggagattaggacacgcagagagaccctggattcacgtgcact-agggatgaccacaggaaggcaccgcgcgaaggcaccgtctgcaagccaaggagagaggcccccggaaaaccaa-cctgcccacacccaggtctcggcctccagcctccagcttccatg------------------tctgtggttaaaccatgtagtctgcggtgcttgtcaaggcagctctggccgact--gaCGGTTTCTGTGATTGGAACTGCTGCCTGTAAATATGAGTGAGAGCCCAGCCGATAGAGATGCATGAGGCCTGCCAAAGCCTGGCGCATCAATGGTGCCCTGGCGGAGGTGGTGAGGGTGTTAGCCAGGAACGCAGTCTGCAAGGCAATATTCCTTCGCGAGGGGGGTATTAGAAAAAAGACCGTGCAAGTTCACATGCACACGCAATGCTGAACATCTTCA-CACTG--ATGAACTCTCACCATTCTTGACTGAAGAAACAGGGTGTGATGGATAATTGGAAAGAGCAGAAACGCTGAAC---ACATCTGTGAAGCATT-GGTTTTAAAGTTGGGAAAATGTGAAAAATCCAGACCCACCTTTGGAAAGAACATGCCCTGAAGGTACAAGTAGGGCTGAGTTTCCTGTCTGAGGAGTTGGCAGCCCAGGGAGGGAAGGAGAGAGCCGCAGGCAGGGGAGGGTGCAGCCAGCTG- i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169004021 712 - 170955103 atccaatctgactggtgtccttatcagacgcggagattaggacaggcagagagaccctggattcacgtgcact-agggatgaccacaggaaggcaccgcgcgaaggcaccgtctgcaagccaaggagagaggcccccggaaaaccaa-cctgcccacacccaggtctcggcctccagcctccagcttccatg------------------tctgtggttaaaccatgtagtctgcggtgcttgtcaaggcagctctggccgact--gaCGGTTTCTGTGATTGGAACTGCTGCCTGTAAATATGAGTGAGAGCCCAGCCGATAGAGATGCATGAGGCCTGCCAAAGCCTGGCGCATCAATGGTGCCCTGGCGGAGGTGGTGAGGGTGTTAGCCAGGAACGCAGTCTGCAAGGCAATATTCCTTCGCGAGGGGGGTATTAGAAAAAAGACCGTGCAAGTTCACATGCACACGCAATGCTGAACATCTTCA-CACTG--ATGAACTCTCACCATTCTTGACTGAAGAAACAGGGTGTGATGGATAATTGGAAAGAGCAGAAACGCTGAAC---ACATCTGTGAAGCATT-GGTTTTAAAGTTGGGAAAATGTGAAAAATCCAGACCCACCTTTGGAAAGAACATGCCCTGAAGGTACAGGTAGGGCTGAGTTTCCTGTCTGAGGAGCTGGCAGCCCAGGGAGGGAAGGAGAGAGCCGCAGGCAGGGGAGGGTGCAGCCAGCTG- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163815972 711 + 165299245 atccaatctgactggtgtcctcatcAGACGTGGAGATTAGGACATGCAGAGAGACCCTGGATTCACGTGCACT-AGGGATGACCACAAGAAGGCACCGCGCGAAGgcaccatctgcaagccaaggagacagGCCCACACAAAACCAA-CCT-CCCACACCCAGGTCTcggcctccagcctccagcttccATG------------------TCTGTGGTTAAACCATGTAGTCTGTGGTGCTTGTCAAGGCAGCTCTGGCCGACT--GACGGTTTCTGTGATTGGAACTGCTGCCTGTAAATATGAGTGAGAGCCCAACCGATAGAGATGCATGAGGCCTGCCGAGGCTTGGCGCATCAATGGTGCCGTGGCGGAGGTGGTGAGGGTGTTAGCCAGGAACGCGGTCTGCAAGGCAATAGTCCTTCGCGAGGGGGGTATTAGAAAAAAGACCGTGCAAGTTCACATGCACACGCAATGCTGAACATCTTCA-CCCTG--ATGAACTCTCACCATTCTTGACTAAAGAAACAGGGTGTGATGGATAATTGGAAAGAGCAGAAACGCTGAAC---ACATCTGTGAAGCATT-GGTTTTAAAGTTGGGAAAACGTGAAAAATCCAGACACACCTTTGGAAAGAACATGGCCTGAAGGTACAGGTAGGGCTGAGTTTCCTGTCTGAGGAGTGGGCAGCCCAGGGAGGGAAGGACAGAGCCGCAGGCAGGGGAGGGTGCAGCCAGCTG- i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96600153 711 + 98384682 atccaatctgactggtgtccttatcagaagcggagattaggacacacagagagaccctggattcacgtgcact-agggatgaccacaggaaggcaccgcccgaaggcaccgtctgcaagccgaggagagaggcccacagaaaaccaa-cct-cccacacccaggtctaggcctccagcctccagcttccatg------------------tctgtagttaaaccatgtagtctgtggtgcttgtcaaggcagctctggccgact--gacaGTTTCTGTGATTGGAATCGCTGCCTGTAAATATGAGTGAGAGCCCAGCCGATAGAGATGCATGAGGCCTGCTTAAGCTTGGCGCATCAATGGTGCCGTGGCGGAGGTGGTGAGGGTGTTAGCCAGGAACGCAGTCTGCAAGGCAATAGTCCTTAGCGAGGGGGGTATTAGAAAAAAGACTGTGCAAGTTCACATATGCACACAATGCTGAACATCTTCA-AACTG--ATGAACTCTCACCATTCTTGACTGAAGAAACAGGGTGTGATGGATAATTGGAAAGAGCAGAAACGCTGAAC---ACATCTGTGAAGCATT-GGTTTTAAAGTTGGGAAAACGTGAAAAATCCAGACACACCTTTGGAAAGAACATGCCCTGAAGGTACAGGTAGGGCTGAGTTTCCTGTCTGAGGAGTTGGCAGCCCAGGGAGGGAAGGAGAGAGCCACAGGCAGGGGAGGGTGCAGCCAGCTG- i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169805235 693 + 171630274 gtccagtctgactggtgtcctcatcagcagtggagattaggacgcagggagaggccgtggattcacgtgcacagagggatgacca------------gcatgaaggtgccatgtgcaagcccaggagagaggcccccaaaaagccca-tctgcccacacccaggtcttggcctccagcc-------tccacg------------------tctgtggttaaagcatgcagtctgcagtgcttgtcagggcggccctgccagact--CACAGGTCCTGTTTTTGGAATTGCTGCCCGTAAATTTGAGTGAGAGTCCAGGCAAAAGACCTGCACGAGGCCTGCGGAAGCTTGGCCCATGGATGGTGTGCTGGCGGA--TGGTGAACGTGCCAGCCGGGAACGCTGTCTGGAAGGCAATATTCCTTCACGAGG-GGGTGTTAGAAATGGAACTGTGCACGTTGACATATACATGCAATGCCCAGCATCCTCA-CACTGGTATCAGCTCTCACCATTCTTGACTGAAGAAACA-GGCGCGGTGGATAAATGGAAAAAGTAAAATCATCGAGCGAGACATCTGTGAAGTGTTGGGTTTTGTAGTTGGGAAAATGTGGAAAATCCAGACACAC--ATGGAAAGAAAGTTCTCTGAAGGTACAGGTGGGACTGAGTGCCCT-TCTAAAGAGTTGGCATCCCAGGGAGGGAAGGAGCAAGCCACAGGCAGGTGAGGGCACAGCCAGCTT- i calJac3.chr4 C 0 I 269 s canFam3.chr1 56098775 654 + 122678785 acctggtatactgggtgtccctgtgggaagaggcgcttag----------------------------------atggaaggccccacaaagtctcagggagcaagcaatgtctgtgcagctgggagagcccctcgggaaagaccagccctgcccacgcctggatctcagactccagat-------tccaggaacgtgagcgaacaaacatctgGAGGTGAAGTGGACTGTCTGCATTGTCTGTCCTGGTGGCCCAAGCGGAGTAGGACGGTTACTGTG-CTGGAAGTGTTACCA------------GAGGGTACAGACCCTGTAGGTG---GAAGCCC-------CATCACATTGCCACGGGGCCCATCC-------------GTATTCGTCAGGCTCACTGTCTAGAAGGTGTTACTCTTTCAAGAGGTGGG-ATTTTAAATAAGGCTGCATACGTTTGCACGTACGTGTCATGCTAAAAATGTTTAGCACTGATATGAATTTTCACCATTTTTGGCTGACAAAGCAGGGCAGGAGGGCGAGTTGGATAAATTACAAATGGTGAAT--GAGGTGTGTGGAGTATTTAGTTTCAAATTTGGGGAAAAGTGAAAAATGCAGACACATAC-TGGACAGAAAGTGCCCTGAAGGCATAACCGTGATTGGGTTTCCTGTCTGACAAGTTCCAAACCCCAGAA------CAGACATCTGCAGGCA-GGGGGTGTGAGGTCCCCTCA i canFam3.chr1 C 0 C 0 a score=3353291.000000 s hg38.chr6_KB021644v2_alt 3161 1255 + 185823 CCT---------------------------------------------------------------------GTCAATCCCCCAGCCACCTGCCCCTCTATCCCCCGGCTGCAAGGTGATGGACAGCTCGGTTGTCAGCATTTCCTGCGTGAGTGTTCTACAGTGTGACCTGTGAAACAGGGTTATACTTCTCCAGAGCAGGCAGATATCTGATTACAAACAACTGCAGTTGTATGCAATACTTGCAATACTCAATTACAACACA----CAATTTATTTTTAAATCACAGAAATATATATATGTTTTCCTACTGCTCTAACCTTCCCTGAAGGTTCTAAGTTAGCACCTTGCTTGCAGGGGTA-TGACAGAGTTTGctctctcattccctttctctcttatctctctctctctctttctctctctctctctccctctttcactctccctttccctttccctCCCTCTTCTTACGTCTTTTTTTC-CTCTCTCTCTCTTATTCACTCCTCCACC--CTCTCTCTCCC--CTACTGCCAT---CTGAAC------ttattaaaaattccaaacacatgtaccagtggagacc-tgtgattc------cctccatgttctcctcacctggctgcaacaattattgaggcaaggccagttttgtttcaccgaacgtccccacccgctGGCTCTGGTTTCATCTGCTGTC----CCTTGCCCTTG-CCCAGGTTCTCAACTCCC--CAGA-T-ATTTTGAAGCACATTCCTGCCCGCAGCCCACACCTCCCTAGACAGCCCCAGAAATCACCCTTTGATTTGCCGTGATGTCGCAGCTTTTCCGCAGATGAAGTTGG--------CAGTGAG-----CTGAG--A--------------TTCCACCTGGTAAGTACGAGGTGGCATCCTTGGGACCTGATGCCTAGCTTCTCATTCGTCTTTTGGAAAATGTGTTGTAATTTGGCACGGTGTGACAGCAAGTGACTTAATATGATTTTAGTGGAACTGGGGTTCAGAGGGCTGAGAGGGTTTACAAAATGGGTAACTTTTCTTAAGACATGTGTACATG-TCTGTATGACAGATGAATAGTGATCTGGTATagagacagacagatgatgagagatggatggatagatatc------gagagagagagagag--agT-GTGTGTGTGTGCATGGGCG----------------CACTCTGCTCTAAAGGCTTTCTGTAAAATGCCTCTT-ATTAGAATTTTCTTAGGCAACCTTTTATATTTTACTTTGCCATAGCTAAGCCCTTATGTAAATATGCTTTCAAA-AATAAATATCCAGTTGATGACTTCACCATTGAGCTTGCTGTACTAAAACATGTGCTAACTCAAATTCATCAGTttttttcagctgta s panTro4.chr6 170617059 1251 + 172623881 CCT---------------------------------------------------------------------GTCAATCCCCCAGCCACCTGCCCCTCAATCCCCCGGCTGCAAGGTGATGGACAGCTCGGTTGTCAGCATTTCCTGCGTGAGTGTTCTACAATGTGACCTGTGAAGCAGGGTTATTCTTCTCCGGAGCAGGCAGATATTTGATTATAAACAACTGCAGTTGTATGCAATACTTGCAATACTCAATTACAACACAAACTTAATTTATTTTTAAATCACAGAAATATATATATTTTTTCCTACTGCTCTAACCTTCCCTGAAGGTTCTAAGTTAGCACCTTGCTTGCAGGGGTA-TGACAGAGTTTGctctctcactccctttctctcttatctctctctctctctttctctctctctctctccctctttcactctccctttccctttccctccctcttcttatgtctttttttc-ctctctctctc--attcactcctccacc--ctctctctcCC--CTACTGCCAT---CTGAAC------ttattaaaaattccaaacacatgtaccagtggagacc-tgtgattc------cctccatgttctcctcacctggctgcaacaattattgaggcaaggccagttttgtttcaccgaacgtccccacccactGGCTCTGGTTTCATCTGCTGTC----CCCTGCCCTTG-CCCAGGTTCTCAACTCCC--CAGA-T-ATTTTGAAGCACATTCCTGCCCGCAGCCCACACCTCCCTAGACAGCCCTAGAAATCACCCTTTGATTTGCCGTGATGTCGCAGCTTTCCCGCAGATGAAGTTGG--------CAGTGAG-----CTGAG--A--------------TTCCACCTGGTAAGTACAAGGTGGCATCCTTGGGACCTGATGCCTAGCTTCTCATTCGTCTTTTGGAAAATGTGTTGTAATTTGGCACGGTGTGACAGCAAGTGACTTAATGTGATTTTAGTGGAACTGGGGTTCAGAGGGCTGAGAGGGTTTACAAAATGGGTAACTTTTCTTAAGAC--GTGTACATG-TCTGTATGACAGATGACTAGTGATCTGGTATAGAGACAGACAGATGATGAGAGATGGATGGATAGATATC------GAGAGAGAGAGAGAG-------TGTGTGTGTGCATGTGCG----------------CACTCTGCTCTAGAGGCTTTCTATAAAATGCCTCTT-ATTAGAATTTTCTTAGGCAACCTTTTATATTTTACTTTGCCATAGCTAAGCCCTTATGTAAATATGCTTTCAAA-AATAAATATCCAGTTGATGACTTCACCATTGAGCTTGCTGTACTAAAACATGTGCTAACTCAAATTCATCAGTttttttcagctgta i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172363743 1252 + 174210431 CCT---------------------------------------------------------------------GCCAATCCCCCAGCCACCTGCCCATCAATCCCCCGGCCACAAGGTGATGGACAGCTCGGTTGCCAGCA-TTCCTGCGTGAGTGTTCTACAATGTGACCTGTGAAACAGGGTTATACTTCTCCAGAGCAGGCAGATATTTGATTATAAACAACTGCAGTTGTATGCAATACTTGCAATACTCAATTACAACACA--CACAATTTGTTTTTAAATCACAGAAATATATATATTTTTTCCTACTGCTCTAACCTTCCCTGAAGGTTCTAAGTTAGCACCTTGCTTGCAGGGGTG-TGACAGAGTTTCctctctcactccctttccctct--tctctctctctgtctttctctctctgtctctccctctttcactctccctctccctttccctccctctta----gtctttttttc-ctctctgtctcttattcactcctccaccctctctctctcCC--CTACCGCCAT---CTGAAC------TTATTAGAAATTCCAAACACATGTACCAGTGGAGACC-TGTGATTC------CCTCCATGTTCTCCTCACCTGGCTG---CAATTATTGAGGCAAGGCCAGTTTTGTTTCACCGAACGTCCCCACCCGCCGGCTCTGGTTTCATCTGCTGTC----CCCTGCCCTTGCCCCAGGTTCACAACTCCC--CAGA-T-ATTTTGAAGCACATCCCCGCCCCCAGGCCACACCTCCCTAGACAGCCCCAGAAATCACCCTTTGATTTGCTGTGATGTCGCAGCTTTCCCGCAGTTGAAGTTGG--------CAGTGAG-----CTGAG--A--------------TTCCACCTGGTGAGTACGAGGTGGCGTCCGTGGGACCTGATGCCTAGCTTCTCATTCGTCTTTTGGAAAAGGTGTTGTAATTTGGCATGGTGTGACAGCAAGTGACTTACTGTGATTTTAGTGGAACTGGGGTTCAGAGGGCTGAGAGTGTTTACAAAATGGGTAACTTTTCTTAAGACATGTATACATG-TCTGTATGACAGATAAATAGTGATCTGGTATagagacagacagatgatgagagatggatggatagatatc------gagagagagagagagaaaga-gTGTGTGTGTGCATGTGCG----------------CACTCTGCTCTAGAGGCTTTCTATAAAATGCCTCTTAATTATAATTTTCTTAGGCAACCTTTTATATTTTACTTTGCCATAGCTAAGCCCTTATGTAAATATGCTTTCAAA-AATAAATATCCAGTTGATGACTTCACCATTGAGCTTGCTGTACTAAAACATGTGCTAACTGAAATTCATCAG-TTTTTTCAGCTGTA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156232653 1323 + 157873769 CCTGTCAATCTCCCAGCCACCTGCCTGTCAATCCCCCGGCCACCTGCCCGTCAATCCCCCAGCCACCTGCCCGTCAATCCCCCGGCCACCTGCCTGTCAATCCCCCGGCCACAAGGCGATGGACAGCTCAGGTGTCAGTG-TCCCTGCGTGAGTGCTCTACAATGTGACCTGTGAAACAGGGTTATACTTCTCCAGAGCAGGAAGATATTTGATTATAAACAACTGCAGTTGTATGCAATACTTGCAATACTCAATTACAACACACACTTAATTTATTTTTAAATCACAGAAATATACATATTTTTTCCTACTGCTCTAACCTTCCCTGAAGGTTCTAAGTTAGCACCTTGCTTGCAGGGGTG-TGACAGAGTTTGctctgtcactccctttctctct------tctctctctctttttctctctctctctccctttttccctctccctttccctttccttctctcttcttatatcttttttt--ctctctctctcttattcactcctccaccctctctctctcCC--CTACCGCCAT---CTAAAC------ttattaaaaattccaaacgcatgtgccagtggagacc-tgtgattc------cctccatgttctcctcacctggctgcaacaattattgaggcaaggccagttttgtttcaccaaatgtccccaccctctggctccGGTTTCATCTGCTGTC----CCCTGCCCTTGCCCCAGGCTCACAACACCCTATAGA-T-ATTTTGAAGCACATCCCCGCCCCCAGCCCATCCCTCCCTAGACAGCCCCAGAAACCACCCTTTGATTTGTGGTGATGTCGCAGCTTTCCCGCAGATGAAGTTGG--------CAGTGAG-----CTGAG--A--------------TTCCACCTGGTAAGTACGAGGTGGCGTCCTTGGGACCTGACACCTAGCTTCTCATTCATCTTTTGGAAAAGG---TGTAATTTGGCATGGTGTGACAGCAAGTGACTTAATGTGATTTTAGTGGAACTGGGGTTCAGAGGGCTGAGAGGGTTTACAAAATAGGTAACCTTTCTTAAGACATGTGTACATG-TCTGTATGACAGATGAATAGTGATCTGGTATagagacagacagatgatgagagatggatggatagatatc------gagagagagagagagaAAAA-GTGTGTGTGTGCATGTGCG----------------CACTCTGCTCTAGAGGCTTTCTATAAAATGCCTCTTAATTATAATTTTCTTAGGCAATCTTTTATATTTTACTTTGCCATAGCTAAGCCCTTATGTAAATATGCTTTCAAA-AATAAATATCCAGTTGATGACTTCACCATTGAGCTTGGTGTACTAAAACATGTGCTAATTCAAA-TCATCAG-ttttttcagctgta i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168048843 1207 + 169853907 CCT---------------------------------------------------------------------GTCACTCTCCCGGCCACCTGTCTGTCAATCTCCTGGCCACAAGGTGATGGACAGCCCGGTGGTCAGCA-TCCCTGCGTGAGTGTTCTACAATATGACCTGTGAAACAGGGTTATACTTCTCCAGAGCAGGCAGATATTTGATTATAAACAACTGCAATTGTA---------TGCAATACTCAATTACAACACATACGTAATTTATTTTTAAATCACAGAAATATATTTATTTTTTCCTACTGCTGTAACCTTCCCTGAAGGTTCTAAGTTAGCGCCTTGCTTGCAAGGGTA-TGACAGAGTTCGctctctcactccctttctctct--------------------tctctctctctctccccctctctttctccctctccctttccctctctctTCTTATCTCTTGTTTTC-CTTTCT------TATTCACCCCTCCACCTTCTCTCTCTCAC--CTACTGCCAT---CTGaac------ttgttaaaaattccaaacacatgtaccagtgaagaccgtgtaattc------cctccatgttctcctcaccgggctgcaacaattactgaggcaaggccagttttgtttcaccgaacgtccccaccACCTGGCTCGGGTTTCATCTGCTGTC----CCCTGCCCTTGCCCCAGGTTCACAACTCCC--TAGA-T-ATTTTGAAGCACATCCCCACCCCCAGCCCATACTTCCCTAGACAGCCCCAGAAATCACCCTTTGATTTACCGTGATGTTGCAGCTTTCCTGCAGATTAAGTTGG--------CAGTGAG-----CTGAG--A--------------TTCCACCTGGTAAGTACGAGGTGGTACCCTCAGAACCTGACGCCTAGCTTCTCATTTGTCTTTTGGAAAAGGTGTTGTAATTTGGCACGGTGTGACAGCAAGTGACTTAATGTGATTTTAGTGGAACTGGGGTTCAGTGGGCTGAGAGGGTTTACAAAATGGGTAACTTTTCTTGAGACATGTGTACATG-TCTGTATGACAGATGAATAGTGATCTAGTATAG----AGACAGATGATGAGAGATGGATGGATAGATATT------gagagagagagagagagaga-gagTGTGTGTACATGTGTG----------------CACTCTGCTCTAGAGGCTTTCTATAAAATGTCTCTTAATTATAATTTTCTTAGGCAACCTTTTATATTTTACTTTGCCATAGCTCAGTCCTTATG-------------------TAAATATCCAGTTGATGACTTCACCATTGAGCTTGGTGTACTAAAACATGTGCCAACTCAAATTCATCAG-TTTTTTCAGCTGTA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169004733 1203 - 170955103 CCT---------------------------------------------------------------------GTCACTCTCCCGGCCACCTGTCTGTCAATCTCCTGGCCACAAGGTGATGGACAGCCCGGTGGTCAGCA-TCCCTGCGTGAGTGTTCTACAATATGACCTGTGAAACAGGGTTATACTTCTCCAGAGCAGGCAGATATTTGATTATAAACAACTGCAATTGTA---------TGCAATACTCAATTACAACACACACGTAATTTATTTTTAAATCACAGAAATATATTTATTTTTTCCTACTGCTGTAACCTTCCCTGAAGGTTCTAAGTTAGCGCCTTGCTTGCAAGGGTA-TGACAGAGTtcgctctctcactccctttctctct--------------------tctctctctctctccccctctctttctccctctccctttccctctctcttcttatctcttgttttc-ctttct------tattcACCCCTCCACCTTCTCTCTCTCAC--CTACTGCCAT---CTGAAC------TTGTTAaaaattccaaacacatgtaccagtgaagaccgtgtaattc------cctccatgttctcctcaccgggctgcaacaattactgaggcaaggccagttttgtttcaccgaacgtccccaccAGCTGGCTCGGGTTTCATCTGCTGTC----CCCTGCCCTTGCCCCAGGTTCACAACTCCC--TAGA-T-ATTTTGAAGCACATCCCCACCCCCAGCCCATACTTCCCTAGACAGCCCCAGAAATCACCCTTTGATTTACCGTGATGTTGCAGCTTTCCTGCAGATTAAGTTGG--------CAGTGAG-----CTGAG--A--------------TTCCACCTGGTAAGTACGAGGTGGTACCCTCAGAACCTGACGCCTAGCTTCTCATTTGTCTTTTGGAAAAGGTGTTGTAATTTGGCACGGTGTGACAGCAAGTGACTTAATGTGATTTTAGTGGAACTGGGGTTCAGTGGGCTGAGAGGGTTTACAAAATGGGTAACTTTTCTTGAGACATGTGTACATG-TCTGTATGACAGATGAATAGTGATCTAGTATag----agacagatgatgagagatggatggatagatatt----------gagagagagagagaga-gagTGTGTGTACATGTGTG----------------CACTCTGCTCTAGAGGCTTTCTATAAAATGTCTCTTAATTATAATTTTCTTAGGCAACCTTTTATATTTTACTTTGCCATAGCTCAGTCCTTATG-------------------TAAATATCCAGTTGATGACTTCACCATTGAGCTTGGTGTACTAAAACATGTGCCAACTCAAATTCATCAG-TTTTTTCAGCTGTA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163816683 1178 + 165299245 CCT---------------------------------------------------------------------GTCACTCCCCC-----------------------GGCCACAAGGTGATGGACAGCCCGGTGGTCAGCA-TCCCTGCGTGAGTGTTCTACAATATGACCTGTGAAACAGGGTTATACTTCTCCAGAGCAGGCAGATATTTGATTATAAACAACTGCAATTGTA---------TGCAATACTCAATTACAACACACacgtaatttatttttaaatcacagaaatatatttattttttcctactgcTGTAACCTTCCCTGAAGGTTCTAAGTTAGCGCCTTGCTTGCAGGGGTA-TGACAGAGTTCGctctctcactccctttctctct--------------------tctctctctctctccctctctccctctccctctccctttccctctctcttcttatctcttgttttc-ctctct------tattcacccctccaccctctctctctcac--ctacCGCCAT---CTGAAC------TTGTTAAAAATTCCAAACACATGTACCAGTGAAGACCGTGTAATTC------CCTCCATGTTCTCCTCACCGGGCTGCAACAATTACTGAGGCAAGGCCAGTTTTGTTTCACCGAACGTCCCCACCAGCTGGCTCGGGTTTCATCTGCTGTC----CCCTGCCCTTGCCCCAGGTTCACAACTCCC--TAGA-T-ATTTTGAAGCacatccccacccccagcccacacTTCCCTAGACAGCCCCAGAAATCACCCTTTGATTTACCGTGATGTCGCAGCTTTCCTGCAGATTAcgttgg--------cagtgag-----ctgag--a--------------ttccacctGGTAAGTACGAGGTGGTACCCTCAGAACCTGACACCTAGCTTCTCATTTGTCTTTTGGAAAAGGTGTTGTAATTTGGCACGGTGTGACAGCAAGTGACTTAATGTGATTTTAGTGGAACTGGGGTTCAGTGGGCTGAGAGGGTTTACAAAATGGGTAACTTTTCTTGAGACATGTGTACATG-TCTGTATGACAGATGAATAGTGATCTGGTATag----agacagatgatgagagatggatggatagatatc------------gagagagagataaa-gagtgtgtgtacatgtgtg----------------cactcTGCTCTAGAGGCTTTCTATAAAATGTCtcttaattataattttcttaggcaaccttttatattttactttgccATAGCTCAGTCCTTATG-------------------TAAATATCCAGTTGATGACTTCACCATTGAGCTTGGTGTACTAAAACATGTGCCAACTCAAATTCATCAG-TTTTTTCAGCTGTA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96600864 1203 + 98384682 CCT---------------------------------------------------------------------GTCAGTCCCCCGGCCACCTGTCCGTCAATCTCCCGGCCACAAAGTGATGGACAGCGCGGTGGTCAGCA-TCCCTGCGTGAGTGTTCTACAATATGACCTGTGAAACAGGGTTATACTTCTCCAGAGCAGGCAGATATTTGATTATAAACAACTGCAGTTGTA---------TGCAATACTCAGTTACAACACACACGTAATTTATTTTTAACTCACAGAAATATATTTATTTTTTCCTACTGCTGTAACCTTCCCTGAAGGTTCTAAGTTAGCGCCTTGCTTGCAGGGGTA-TGACAGAGTTTGctctctcactccctttctctcc--------------------tctctctctcgctccctctctcactctccctctcccgttccctctctcttcttatctcttgttttc-ctctct------tattcacccctccaccctctctctctcAC--CTACCACCAT---CTGAAC------ttattaaaaattccaaacacatgtaccagtgaagaccctgtaattc------cctccatgttctcctcaccgggctgcaacaactactgaggcaaggccagttttgtttcaccgaacatccccaccAGCTGGCTCGGGTTTCATCTGCTGTC----CCCTGCCCTTGCCCCAGGTTCACAACTCCC--TAGA-T-ATTTTGAAGCACACCCCCACCCCCAGCCCACACTTCCCTAGACAGCCCCAGAAATCACCCTTTGATTTACCGTGATGTCGCAGCTTTCCTGCAGATTAAGTTGG--------CAGTGAG-----CTGAG--A--------------TTCCACCTGGTAAGTACGAGGTGGCACCCTCAGAACCTGACGCCTAGCTTCTCATTTGTCTTTTGGAAAAGGTGTTGTAATTTGGCACCGTGTGACAGCAAGTGACTTAATGTGATTTTAGTGGAACTGGGGTTCAGTGGGCTGAGAGGGTTTACAAAATGGGTAACTTTTCTTAAGACATGTGTACATG-TCTGTATGACGGATGAATAGTGATCTGGTATag----agacagatgatgagagatggatg----gatatt------gagagagagagagagagaga-gagTGTGTGTACATGTGTG----------------CACTCTGCTCTAGGGGCTTTCTATAAAATGTCTCTTAATTATAATTTTCTTAGGCAACCTTTTATATTTTACTTTGCCATAGCTCAGCCCTTAAG-------------------TAAATATCCAGTTGACGACTTCACCATTGAGCTTGGTGTACTAAAACATGTGCCAACTCAAATTCATCAG-TTTTTTCAGCTGTA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169806197 1211 + 171630274 CCC---------------------------------------------------------------------GTCAATCCTCCAGTCATCTCCCTGTCAATCTCCCAGCCACAAGGTGATGGACAGCTTGGTGGTCAGCA-TCCCTACACGAGTGTTCTAAAA--TGAACTGTGAAAT-GGGTTCCCCTTCTCCAGAGTAGGCAGATATTTGATTACAAACAACTGCAGTTTTA---------TGCAAGACTCAGTTACGACACACACGTAATTTATTATTAAATCACGGGAGTA----------TTCCTACTGCTCTAGCCTTCCCCGAGGGTTCTAAGTTAGCACGCTGCTTGCAGGGGTC-TGACAGCATTTGctctctcgctccctttttctca----------------tctctccctgtctttctccctctcttgctctccccctc---ttccctctctcttcttatctctttttctctctctct------tattcactcctccaccctctctctctctcCGCTACCAGCAG---CTGAAC------TTACTGAAAATTCC-AACACGTGTAACCGTGCAGAACGTGTGATTC------CCTCCCTGTGCTCCTCAGCTGGCTGCCAGAGTTATTGAGGCAAGTCCTGTTTTGTTTCACTGAATGTTCCCACC------------TTTCACTGAATGTCCCCACCCTGCTCTTG-ACCAGGTCCACACCTCCC--TAGATT-ATTTTGAAGCACATCCCCACTCCCAGCCCCCACTTCCCTAGACATCCCCCAAAATCGCCCTTCGATTTGCCTTGATGTTGAAGCTCTCCTGCAGATGAAGTTGGCAGCTCCCCAGTAAGACTCTCCAAGGCA--------------TTCCACCTGGTAAGTACGAGGTGGCA-CCTTGGGACCTGACACCTAGCTTCTCATTTGCCTTTTGGAAAAGGTGTTGTAATCTG--ATGGTGTGATAGCAAGTGAATTCACCTGATTTTAGTGGAACTAGGGTTCCGAGGGCTGAGAGGGTTTACAAAACAGGTAACCTTTCTCAAGACATGTGTACACG-TCTGTATGAGAGATGAATGGTGGCCTGGTATAGAGACAGACAGACGGTGAGAGATGGGTGGATAGATATCCCAAGGGAGAGAGACAGAGAGAGAGAGGTGTGTGTGTGCATGTGTG----------------CACTCTGCTCTAGAGGCTTTCTATAAAATGTCTCTTAATTATAATTTTCTTAGGAAACCTTTTACA--------------GGCAAAGTATTTTTGAAAGCATGTTTAC------ATAATGTCCAGTCGATGACTTGGCCATCGAGCTTGCTGTACCGAAACATGCGCTAACTCAAATTCATCCG-TTTTCTCAGtttta i calJac3.chr4 I 269 C 0 s canFam3.chr1 56099429 993 + 122678785 --------------------------------------------------------------------------------CCTGG---------GGTAAGTCTGCAAGCCTCCAGGT----GACCGCGGGGAGCTGAGGA-------GAGAAACGCTCTGAAATATGGCC-------------TTCCCTTCTGCAGGGAAGTC--------------------CTGTGGGTTCA---------CCCAGCACCCGGTTACCAAGCACAGGTCATTGATTATTGAGTGAAGAAAGTA----AACTCTTCTGTAAGGCTCT-----------AGGTGTCTAAGTCACCACTTGGC---CACAGACACTAGCGGAGCTTGC---------------CTGTCC-----------------------------------------------------------------------------------TTC-CTCTCC------------------------------CTCCC--CTGCCACCATTGCCTAAGCACCCTGTTATCAAAAATTCCAAACACACACCCTACTAAGGATA--GTAGTGCAGTGAACCCCAACGCACCCAGCACTTGGTGGTGACAATGCTTG-GCCTGGGCCAGCTTCGTTT----------------------------------TCTGCTAAT----GCGCACCC----ACCAG--TGAGCCCTCCC--TGGA-TCACGGTGGAGCAC------------------------------------------TCATCCTTTGGCTTGCCTTCATGTGGTCGATTTCCTGCAGGTGAAGTTGG--------TGGAAAA-----CCCAG--AAGCCTGCCCAAGGCCCCCAGCTGGTAAATGCCAGGTGACACCATTGGGACCTGACATCTACCTTCTCTCTTGGCCCTTGGAGATGGAGCTCCAATCTGTCTCCAGGTGACAGCAGATGACTTAACATGAATGCAAGCAAGGTAAGGTTCAGAGAGCTGAGAGCTTTTCCAGAACTGGTGAGCTCCCTTTAG---TGTTCTCACGATATGTATGATAGACG----GCGTCCTGAC-TAG--------AGAGGATAGTCGATCTACACACAGACTCT------AAGAAtgtgtgtgtgtgtgt-gtgtgtgtgtgtgtgtgtgtgtgtatgAGAGTATATACTCTGCTCTGAACGCATTCTGTAAGGTATTCCTCAACTCTACGTTT-TTAGGCAGTATTTCAT-CCCCCTTTTGCCCTAACTAAGCCCTTTTAAGAATATGACTTAAAACAATACATATACAGTTGATGACTTTATCTTTGGATTTGGCTGATGAAAACAGGAGCTAAGGAACATTCACAAATTTTTCATATTTTTA i canFam3.chr1 C 0 C 0 a score=5320460.000000 s hg38.chr6_KB021644v2_alt 4416 1905 + 185823 ttgaagtacaattgacaaataaaaattatatatacttataatgtacaatgcgatgttccaatacgtgtgtacattgtgaaatgattaaatcaagtgaattaacatatctatcatccatatact-atgactttgtcttgtgagaacatttaaaatattctttcttagcaattttcaaatatccaatacattattattaattatggtcaccatgctgtatggagatcacgacttactcctcctgtctcactgaaactctgttccctttgaccaacatctccccttttcccatgtagccactgccttcacccaggccct---------------actctctgcctctgagtttgac-ttttttagattccatttataagtgagattatgcagcatttgtctttctgtgcctggcttatttcgcttaacataatgtcctccaggtttgttcatattgtggcaaatgacaggatttcactcttttttaaggctgcataatatttcattgtatgtatgtactaccttttctttatccattcatctgtgatggacacttaggtggattccaggttgtggtcattgtgaacagtgttgcagtgaacatggggatgtagatatctcct---caatgcattga-tttcaattcctatggagatacatatccagaggtcaggctgtggg-actatatggtagttctagttttaa-ttttttgaggatcctccatagtgatcaccataatggctggactaacgtacagttgcatccgcagtgtgtaagagttctctttcttccatgccttcactaacatttaacttttttgagaatggtcattctgacttcagtgagatgatattttattgtggttttaatctatatgtccctaatgatgagagatgttgagtattcaaaaatgtacctgttgaccatt-----tgtatatcttcttttgagaagtgtttgttcatgttctttgtccgcattttaattgggttatttgcatttttgctactgagctgATATGCCAAAAACacaagatgaaggactaaaatcatgtgatgatcacagcagattcagaaaaagcgtttggtaaaattcaacatcctttcatgattaaaagccctcaac-aacttaggtgtagaaggaatgcacctcaacacaataaagaccatattaacaaacacttggataacatgacgttcatccatgaaaagctgatggactttcctctaagatcaggaataagacaagaatccccacactcaccacatctactcaacacagcattggaagtcctagccaaaacaattaggcaagaaaaaggaattaatgaaacccaaattgag-aaaaaagatgttacattgtctctgtttgcccatggcataatcttatatgtagaaaacccta---aagactctgtcaaaaacctgctataaataataaacaaatttggtaagtttgcaagatagaaaatcaacatgtagaaatcagtctagccacaaaagaaattaaggaaacaatcccagttacaatagcaaaaattaaaaatattttgaaataaatttaaccaagaaggtgaaagttttatgcactgaaactat-aaaacactgattaaaaaaaa--tcaaagttggaaatcaatgaaaagatagcttaca-ttcatgtattagaaaaaatgctattttaaaaaagtccatactacccaaaggaacttatagatttaatgcaatgtttatcaaaagcccaatgatgtgttttcac-aaaaatataaaaaaggaatcttaaaattcctatggaactacaaaaaaagtcccacatagctaaagttgaatctgagcaagaagaacaaagctggagtcatcacactgcctgatttcaacatgtgctagacagccactgccatccaaacagcatggtgctggcataaaaacagacgcattgac s panTro4.chr6 170618310 1923 + 172623881 ttgaagtacaattgacaaataaaaattatatatacttataatgtacaatgcgatgttccaatacgtgtgtacattgtgaaatgattaaatcaagtgaattaacatatctatcatccatatacttatgactttgtcttgtgagaacatttaaaatattctttcttagcaattttcaaatatccaatacattattattaattatggtcaccatgctgtatggagatcacgacttactcctcctgtctcactgaaacgctgttccctttgaccaacatctccccttttcccatgtagccactgccttcacccaggccctggtagccaccgtcctactctctgcctctgagtttgac-ttttttagattccatttataagtgagattatgcagcctttgtctttctgtgcctggcttatttcgcttaacataatgtcctccagatttgttcatattgtggcaaatgacaggatttcactcttttttaaggctgcataatatttcattgtatgaatgtactaccttttctttatccactcatctgtggtggacacttaggtggattccaggttgtggccattgtgaacagtgtttcagtgaacatggggatgtagatatctcct---caatgcattga-tttcaactcctttggagatacatatccagaggtcaggctgtggg-actatatggtagttctagttttaa-ttttttgaggatcctccatagtgatcatcataatggctggactaacgtacagttgcatccgcagtgcgtaagagttctctttcttccatgccttcactaacatttaacttttttgataatggtcattctgacttgagtgagatgatattttattgtggttttaatctatatgtccctaatgatgtgagatgttgagtattcaaaaatgtacctgttgaccatt-----tgtatgtcttcttttgagaagtgtttgttcatgttctttgtccgctttttaattgggttatttgcatttttgctactgagctgATATGCCAAAAATacaagatgaaggactaaaatcatgtgatgatcacagcagattcagaaaaagcgtttggtaaaattcaacatcctttcatgactacaagccctcaac-aacttaggtgtagaaggaatgcacctcaacacaataaagaccatattaacaaacacttggataacatgatgttcatccatgaaaagctgatggactttcctctaagatcaggaataagacaagaatccccacactcaccacatctactcaacgcagcattggaagtcctagccaaaacaattaggcaagaaaaaggaattaatggaacccaaattgag-aaaaaagacgttacattgtctctgtttgcccatggcataatcttatatgtagaaaacccta---aagactccgtcaaaaaactgctataaataataaacaaatttagtaagtttgcaagatagaaaatcaacatgtagaaatcagtctagccacaaaagaaattaaggaaacaatcccagttacaatagcaaaaattaaaaatattttgaaataaatttaaccaagaaggtgaaagttttatgcactgaaactat-aaaacactgattaaaaaaaaaatcaaagttggaaatcaatgaaaagatagcttaca-ttcatgtattagaaaaaatgctattttaaaaaagtccatactacccaaaggaacctatagatttaatgcaatgtttatcaaaagcccaatgatgtgttttcac-aaaaatataaaaaaggaatcttaaaattcctatggaactacaaaaaaaatcccacatagctaaaggtgaatctgagcaagaagaacaaagctggagtcatcacactgcctgatttcaacatgtgctagacagccactgccatccaaacagcgtggtgctggcataaaaacagacgcattgat i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172364995 1923 + 174210431 TGGAAGTACaattgacaaataaaaattgtatatacttataatgtgcaatgcgatgttccaatatgtgtgtacattgtgaaatgattaaatcaagtgaattaacttatctattatccatatacttatgattttgtcttgtgagaacatttaaaatattctttcttagcaattttcaaatatccaatgcattattattaattatggtcatcatgctgtgtggagatcaagactcactcctcctgtctcactgaaactctgttctctttgaccaacatctcccctttccccatgaagctgctgccctcacccaggccctggtagccaccattctactctctgcctctgagtttgac-ttttttagattccatttataagtgagattatgcagcctttgtctttttatgcctggcttatttcgcttaacataacgtcctccagatttgttcatgttgttgcaaatgacaggatttcactcttttttaaggctgcataatatttcattgtatgtatgtactaccttttctttatccattcatctgtggtggacacttaggtggaatccatgtcgtggccattgtgaacagtgttgcagtgaacatggggatgtagatatcccctctacaatgcattga-tttcaattcctttggagatacatatccagagattaggctgtggg-actatatggtagttctatttttaa-ttttttgaggatcctccatagtgttcaccataatggctggactaatgtacagttgcatctgcagtgtgtaagagttctctttcttccacgccttcactaacatttaacttttttgataatggtcattctgacttgaatgagatgatattttattgtggttttaatctgtatgtccctaatgatgagagatgttgagtattcaaaaatgtacctgttgaccatt-----tgtatatcttcttttgagaaatgtctgttcatgttctttgtccactttttaattgggttatttgcatttttgctactgagttgATATGCCAAaaa---aaaattaaggactaaaatcatatgattatcacaatagattcagaaaaagcatttgacaaaattcaacatcctttcatgattaaaagccctcaacaaacttaggtatagaaggaatgcacctcaacacaataaagaccatattaacaaacacttggataacatgatgttcatccgtgaaaagctgatggactttcctctaagatcaggaataagacaagaatccccacactcaccgcatctactcaacacagcattggaagtcctagccaaaacaattaggcaagaaaaaggaattaatgaaacccaaattggg-aaaaaagatgttacattgtctctgtttgccaatagcataatcttgtatgtagaaaacccta---aagactccatcaaaaaactgctataaataataaacaaatttagtaagtttgcaagatagaaaattaacatgtagaaatcagtctagccacaaaagaaattaagaaaacaatcccagttacaatagtaaaaattaaaaatattttgaaataaatttaaccaagaaggtgaaagttttatacactgaaactat-aaaacactgattaaaaaaaa--ttgaagttggaaattaatgaaaagacagcttacatttcatgtattagaaaaaatactatttttaaaaagcccatactacccaaaggaacttatagatttaatgcaatgtttattaaatgcccaatgacatgttttcac-aaaaatataaaaaaggaatcttaaaattcctatggaattacaaaaaaaatcccacatagctaaagttgaatctgagcaagaagaacaaagctggagtcatcacactgcctgatttcatcatgtgctagatagccactgtcatccaaacagcgtggtgctggcataaaaacagacgcattgac i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156233976 1921 + 157873769 ttgaagtacaattgacaaatcaaaattgtatatatttataatgtacactgtgatgttccaatatgtgtgtacattgtgaaatgattaaatcaagtgaattaacatatctatcagccatatactgatgattttgtcttgtgagaacatttaaaatattctttcttagcaattttcaaatatccaatacattattattaatgatggtcaccatgctgtatggagatcacgacttactcctcctgtctcactgaaactctgttccctgtgaccaacatctcccctttccccatggagctactgccctcacccaggccctggtagccaccatcctactctctgcctctgagtttgac-ttttttagattccatttataagtgagattatgcagcctttgtctttctgtgcctggcttattttgcttaacataacgtcctccagatttgttcatattgtgccaaatgacaggatttcactcttttttaaggctgcataatatttcattgtatgtatgtactaccttttctttatccattcatctgtgatggacacttaagtggagttcatgtcgtggccattgcgaacagtgttgcagtgaacatggggatgtagatatctcct---caatgcattgattttcaattcctttgcagatacatatccagaggttaggctgtggg-actatatggtagttctatttttaa-ttttttgaggatcctccatagtgttcaccataatggctggattaacgtacagttgcatccacagtgcctaagagttctctttcttccatgccttcactaatgtttaacttttttgataatgatcattctgacttgagtgagatgatattttattgtggttttcatctatatgtccctaatgatgagagatgttgagtattcaaaaatgtacctgttgaccatt-----tgtatagcttcttttgagaaatgcctgttcatgttctttgtccactttttaattgggttatttgcatttttgctactgggttgatatgccaaaaaaacaaaatgaaggactaaaatcgtatgattatcacaatagattcagaaaaagcatttgacaaaattcaacatcctttcatgattaaaagccctcaac-aacttaggtgtagaaggaatgcacctcaacacaatacagaccatattaacaaatacttggataacatgatgttcatctgtgaaaagctgatggactttcctgtaagatcaggagtaagacaagaatccccacactcaccacatctactcaacacagcattggaagacctatccaaagcaattaggcaagaaaaaggaattaatgaaacccaaattgggaaaaaaagatgttacattctctctgttcgccgatggcataatcttatatgtagaaaacccta---aagactaggtcaaaaaactgctataaataatcaacaaatttagtaagtttgcaagatagaaaatcaacatgtagaaatgaatctagccacaaaagaaatcaagaaaacaatcccagttacaatagcaaaaattaaaaatattttgaaataaatttaaccaagaaggtgaaagttttatacactgaaactat-aaaacactgatttaaaaaa---ttgaagttggaacttaatgaaaagatagcttaca-ttcgtgcattagaaaaaatacaatttttaaaaagtccacactacctaaaggaacctatagatttaatgcaatgtttatcaaaagcccaatgatgtgttttcac-aaaaatataaaaaaggaatcttaaaattcctatggaattacaaaaaaa-ccccacatagctaaagttgaatctgagcaagaagaacaaaactggcgtcatcacactgcctgatttcaacatgtgctagatagccactgtcatccaagcagcatggtgctggcatgaaaacagacacattgac i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168050050 1855 + 169853907 CTGAAGTACaattgacaaataaaaattatatatatttataatgtataatgcgacgttccaatatgtgtgtacattgtggaatgattaaatcaagtgaatcaacatatctatcatccatatacttattattttgtcttgtgagaacatttaaaatattctctctcagcaattttcaaatatccaatacattattattaattatggtcaccatgctttatggagatcacgacttactcctcctgtctcactgaaactctgttccctttggccaacgtctgccctttccccgtgtagctgctgccctcacccaggtcctggtagccaccaccctactctctgcctctgagtttgac-tttttaagattccacttataagtgggattatgcagcctttgtctttctgtgcctggcttatttcgcttaacataacgtcctccagatttgttcatattgtaacaaatgacaggatttcactcttttttgaggctggataatatctcattgtatgtatgtactaccttttctttatccattcatcggtgatggacacgtaggtggattccatgtcatggccgttgtgaattgtgttgcagtgaacatgggaatgtagatgtctcct---caatgcattga-tttcaattcct-tggagatacgtatccagaagtgaggctgtggggactatatggtggttctatttttaatttttttgaggatcttccatagtgttcaccataatggctggactaacgtacagttgcatccacagtgtgtaagagttctctttcttccacgccttcactaacatttaacttttttgataatggtcattctgacttgagtgagatgacattttattgtagttttaatctataggtccctaatgatgagagaggttgaatattcaaaaatgtacctgttgactatt-----tgtatgtcttcttttgagaaatgtctgttcatgttctttgtccactttttaattgggttatttgcatttttgctactgagttgatatgccaaaaaaacaaaatgaaggactaaaatcatatgattatcacaatagattcaggaaaaacatctgacaaaattcaacatcctttcatgattaaaagcccccaac-aacttaggtgtagaaggaatgcacctcaacacaataaagaccatgttaacaaacacttgggtaacatcatgttcatctgtgaaaagctgacagactttcctctaagatcaggaataagacaagaatccccactctcaccacatctactcaacacagtattggaagtcctagccaaaacgattaggcaagaaaaaagaattaatgaaacccaaattggg-aaaaaagatgttacattgtctctgtttgctgatggcataatcttatatgtagaaaatccta---aagactccatcaaaaagctgctataaataataaacaaatttagtaagtttgcaagatagaaaatcaacatgtagaaatcagtctagccacaaaagaaattaagaaaacaatcccagctgcaatagcaaaaattaaaaatattttgaactgtatttaaccaagaaggtgaaagttttgtacactgaaactat-aaaacactgatttaaaaaaa--ttgaagttggaaatcaatg----------------------------------------------------------------aggaatctatagatttaatgcaatgtttatcaaaagcccaattatgtgttttcac-aaaaatataaaaaaggaatcttaaaattcctatggaactacaaaaaaa-tcccacatagctaaagttgaatccgagcaagaa---caaaactggagtcatcacactgcctgatttcaacgtgtgctaaatagccaccgtcatccaaacagcatggtactggcattaaaacagatgcattgac i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169005936 1855 - 170955103 CTGAAGTACaattgacaaataaaaattatatatatttataatgtataatgcgacgttccaatatgtgtgtacattgtggaatgattaaatcaagtgaatcaacatatctatcatccatatacttattattttgtcttgtgagaacatttaaaatattctctctcagcaattttcaaatatccaatacattattattaattatggtcaccatgctttatggagatcacgacttactcctcctgtctcactgaaactctgttccctttggccaacgtctcccctttccccgtgtagctgctgccctcacccaggtcctggtagccaccaccctactctctgcctctgagtttgac-tttttaagattccacttataagtgagattatgcagcctttgtctttctgtgcctggcttatttcgcttaacataacgtcctccagatttgttcatattgtaacaaatgacaggatttcactcttttttgaggctggataatatttcattgtatgtatgtactaccttttctttatccattcatcggtgatggacacgtaggtggattccatgtcatggccgttgtgaatagtgttgcagtgaacatgggaatgtagatgtctcct---caatgcattga-tttcaattcct-tggagatacgtatccagaagtgaggctgtggggactatatggtggttctatttttaatttttttgaggatcttccatagtgttcaccataatggctggactaacgtacagttgcatccacagtgtgtaagagttctctttcttccacgccttcactaacatttaacttttttgataatggtcattctgacttgagtgagatgacattttattgtagttttaatctataggtccctaatgatgagagatgttgaatattcaaaaatgtacctgttgactatt-----tgtatatcttcttttgagaaatgtctgttcatgttctttgtccactttttaattgggttatttgcatttttgctactgagttgatatgccaaaaaaacaaaatgaaggactaaaatcatatgattatcacaatagattcaggaaaaacatctgacaaaattcaacatcctttcatgattaaaagccctcaac-aacttaggtgtagaaggaatgcacctcaacacaataaagaccatgttaacaaacacttgggtaacatcatgttcatctgtgaaaagctgacagactttcctctaagatcaggaataagacaagaatccccactctcaccacatctactcaacacagtattggaagtcctagccaaaacaattaggcaagaaaaaagaattaatgaaacccaaattggg-aaaaaagatgttacattgtctctgtttgctgatggcataatcttatatgtagaaaatccta---aagactccatcaaaaagcggctataaataataaacaaatttagtaagtttgcaagatagaaaatcaacatgtagaaatcagtctagccacaaaagaaattaagaaaacaatcccagctgcaatagcaaaaattaaaaatattttgaactatatttaaccaagaaggtgaaagttttgtacactgaaactat-aaaacactgatttaaaaaaa--ttgaagTTGGAAATCAATG----------------------------------------------------------------aggaatctatagatttaatgcaatgtttatcaaaagcccaattatgtgttttcac-aaaaatataaaaaaggaatcttaaaattcctatggaactacaaaaaaa-tcccacatagctaaagttgaatccgagcaagaa---caaaactggagtcatcacactgcctgatttcaacgtgtgctaaatagccaccgtcatccaaacagcatggtactggcattaaaacagatgcattgac i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163817861 1859 + 165299245 CTGAAGtacaattgacaaataaaaattatatatatttataatgtataatgCGACGTTCCAATATGtgtgtacattgtggaatgattaaatcaagtgaATCAACGTATCTATCATCCATATACTTATTATTTTGTcttgtgagaacatttaaaatattctctctcagcaattttcaaatatccaatacattattattaattatggtCACCATGCTTTATGGAGATCACGACTTACTCCTCCTGTCTCACTGAAACTCTGTTCCCTTTGGCCAACGTCTCCCCTTTCCCCGTGTAGCTGCTGCCCTCACCCAGGTCCTGGTAGCCACCACCCTACTCTCTGCCTCTGggtttgac-tttttaagattccacttataagtgagattatgcagcctttatctttctgtgcctggcttatttcgcttaacataacgtcctccagatttgttcatattgttacaaatgacaggatttcactcttttttgaggccggataatatttcattgtatgtatgtaccaccttttctttatccattcatcggTGATGGACACGTAGGTGGATTCCATGTCATGGCcgttgtgaatagtgttgcagtgaacatgggaatgTAGATGTCTCCT---CAGTGCATTGA-TTTCAATTCCT-TGGAGATACGTATCCAGAAGTGAGGCTGTGGGGACtatatggtggttctatttttaatttttttgaggatcCTCCATAGTGTTCACCATAATGGCTGGACTAACGTACAGTTGCATCcacagtgtgtaagagttctcTTTCTTCCACGCCTTCACtaacatttaacttttttgatAATGGTCATTCTGACTTGAGTGAGctgatattttattgtggttttaatctaTACATCCCTAATGATGAGAGATGTTGAATATTCAAAAATGTACCTGTtgactatt-----tgtatatcttcttttgagaaatgtctgttcatgttctttgtccgctttttaattgggttatttgcatttttgctactgagttgatatgccaaaaaaacaaaatgaaggactaaaatcatatgattattacaatagattcagaaaaaacatttgacaaaattcaacatcctttcatgattaaaaGCCCTCAAC-AACTTAGGTGTAGAAGGAAtgcacctcaacacaataaagaccaTGTTAACAAACACTTGGGTAACATCATGTTCATCTGTGAAAAGCTGACagactttcctctaagatcaggaataagacaagaatCCCCACTCTCACCACAGCtactcaacacagtattggaagtcctagccaaaacaattaggcaagaaaaaagaattaatgaaacCCAAATTGGG-AAAAAAGATGTTACattgtctctgtttgctgatggcataatcttatatgtagaaaatccta---aagactccatcaaaaagctgctataaataataaacaaatttagtaagtttgcaagatagaaaatcaacatgtAGAAATCAGTCTAGCcacaaaagaaattaagaaaacaatcccagctgcaatagcaaaaattaaaaatattttgaactatatttaaccaagaaggtgaaagttTTGTacactgaaactataaaaacactgattaaaaaaaa--ttgaagttggAAATCAATG----------------------------------------------------------------AggaatctatagatttaatgcaatgtTTATCAAAAGCCCAATTATGtgttttcac-aaaaatataaaaaaggaatctTAAAATTCCTATGGAACTACaaaaaaa-TCCCATGTAGCTAAAGTTGAATCCaagcaagaagagcaaaactggaGTCATCACACTGCCTGATTTCAACATGTGCTAGATAGCCACCGTCATccaaacagcgtggtactggcattaaaacagaCGCATTGAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96602067 1854 + 98384682 CTGAAGTACaattgacaaataaaaattatatatatttataatgtataatgcgacgttccaatatgtgtgtacattgtggaatgattaaatcaagtgaatcaacatatctatcatccatatacttattattttgtcttgtgagaacatttaaaatattctatctcagcaattttcaaatatccaatacattattattaattatggtcaccatgctttatggagatcacgacttactcctcctgtctcactgaaactctgttccctttggccaacatgtcccctttccccatgtagctgctgccctcacccaggtcctggtagccaccaccctactctctgcctctgagtttgac-tttttaagattccacttataagtgagattatgcagcctttgtctttctgtgcctggcttatttcgcttaacataacgtcctccagatttgttcatattgttacaaatgacaggatctcactcttttttgaggctggataatatttcattgtatgtatgtaccaccttgtctttatccattcatcgttgatggacacttaggtggattccatgtcatggccgttgtgaatagtgttgcagtgaacatgggaatgtagacgtctctt---caatgcattga-tttcaattcct-tggagatgcgtatccagaagtgaggctgtgggaactatatggtggttctattgttaatttttttgaggatcctccatagtgttcaccataatagctggactaacgtacagttgcatccacagtgtgtaagagttctctttcttccacgccttcactaacatttaacttttttgataatggtcattctgacttgagtgagatgatattttattgtggttttaatctatacatccctaatgatgagagatgttgaatattcaaaaatgtacctgttgactatt-----tgtatatcttcttttgagaaatgtctgttcatgttctttgtccactttttaattgggttatttgcatttttgctactgagttgatatgccaaaaaaacaaaatgaaggactaaaatcatatgattattacaatagattcagaaaaaa-atttgacaaaattcaacatcctttcatgattaaaagccctcaac-aacttaggtgtagaaggaatgcacctcaacacaataaagaccatgttaacaaatacttgggtagcatcatgttcatctgtgaaaaactgacagactttcctctaagatcaggaataagacaagaatccccactctcaccacatctactcaacacagtattggaagtcctagccaaaacaattaggcaagaaaaagcaattaatgaaacccagattggg-aaaaaagatgttacattgtctctgtttgctgatggcataatcttatacgtagaaaacccta---aagacaccatc---aagctgctataaataataaacaaatttagtaagtttgcaagatagaaaatcaacatgtagaaatcagtctagccacaaaagaaattaagaaaacaatcccagctgcaatagcaaaaattaaaaatattttgaactaaatttaaccaagaaagtgaaagttttgtacactgaaactat-aaaacactgattaaaaaaaa--ttgaagTTGGAAATCAATG----------------------------------------------------------------aggaatctatagatttaatgcaatgtttatcaaaagcccaattatgtgttttcac-aaaaatataaaaaaggaatcttaaaattcctatggaactacaaaaaaa-tcccacgtagctaaagttgaatccgagcaagaagaacaaaactggagtcatcacactgcctgatttcaacatgtgctagatagccaccgtcatccaaaaagcatggtactggcattaaaacagatgcattgac i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169807408 1871 + 171630274 ttgaagtataattgacaaataaaaattgtatctattcat-atgtacaatgagatgttccaatatgtgtgtaccacgtgaaatgattaaatcaggtggattaacatatctaccattcatatgcttattattttgtactgtgagaacatttcaaatattccttcttagcaattttcaaacatccaatacattattattaattatggtcagcacgctgtacagagatcacgacttactcctctgctctgcctgaagctccattccctttaaccagcatc-cccccgtccccatgtggcccctgccctcacccagggcctggtagcctccattctactctgtgcctctgagtttgactttttttagattccacttataagtgagactatgtagcctttgtctttctgtgccatacttatttcacctaacgtaacatcccccaggtctggccatgttgttgcaaatgacaggacttcattcttctttaaggttgcatagtatttcattgtattcacatcctgcatctgctctatccactcatctgtgatggacagtcagggtgattccgtgccttggccgttgtgaacagtgtttcagtgaacacgggaacgtcgacatctccc------tgtattga-tttcaattcctttggagatactgatccagaagtgagactgtggg--gtgtacggcagttcta-ttttaa-tattttgagggaccttcatagagttcac-----------------tgtgcgcttacatctgcggcgtaggagag--ctcttcctcccacgccatcactaacagctgacttttttgataaccgtcgttctgacttgagtgagatgatagtttattgtggttttgatttgtatttccctaaagatgagagaagttgaatatttaaaaatgtacttcttgaccatttgcactgtatgtcttctttttagaaatgtctgttcatgttctttgtccactttttaattgggttatttgcattgttgctactgagttgacatgccaaattaacaaaattaaggacaaaagtcctgtgattatcacaatagattcagaaaaagcacccaacaaaatttcacatcgtttcattattaaaaaccctcaac-aacttaggggtagaaggaaca-accttgagacaaaaaagatcatattaacaaacacatggacaacgtcaggttccactgtgaaaagctgatgggctttcctctaagagcaggaacaagacaaagatgcccactctcaccacatctactcaacacagcactggaggtcccagccaaagcaattgggcaagaaaaagaaactaaaggaatccaaattggg-aagaaggatgttgcattgcctctgcttgccaatagcatgatgttatatgtagaaaactctaaagaagactccatcaaaaaatggttataaataataaacaaatttagtaagattgc-------------aacatgtagaaatcagtctagccacaaaagaaattaagaa------------------agcaaaaacttaaaatattttgaattaaatttaaccaagaaggtacaaattttgcacactgaaactataaaaagactgattttaaaaa---tcgcagatggaaatcaatgaaaagatagctcaca-ttcatgtattagaaaaattactatttttaaaaagtccatactacccaaaggactctacagatgtaataaaacctttatcaaaatctcaatgttgtcttttcacaaaaaatagaaaaaagaaatcttaaaattcctatgtaactacaaaaaaa-tcccacatagctaaag-tgaatctgagcaagaagaacaaaactggaggtgtcacactgcctggtttcaacatgtgctggatagccgctgtcagcaaaacagcatggtcctgacatgaaaacagacacattgac i calJac3.chr4 C 0 I 431 e canFam3.chr1 56100422 0 + 122678785 C a score=1562769.000000 s hg38.chr6_KB021644v2_alt 6321 568 + 185823 cactggagcagtgtagggagcccagaaataaatccacatttttatggtcagttgatctttgagaaattgctaagaatacacaatgg--agaaatgatagtttcctc----aatagt-gttgggcaact-ggatgtccatggcaggagagtaggagtgg--atgccaatctcacactagatacaaaa--ttagcttgaagtgtatcagtgacttaaacg-taagacctgccaatgtaaaactcctagaaaaaaacaagggaaaaagcttcatgacattgctctgggca--gagtctttgaatatgaccccaaaagacaggcaacaaaagcaaaaa-tagacaaatggaattgcatccaaattaaaagcttcttcacagcaaagggaacaagtaaagaatgaagagacagcctatagagtgggagatatttg-aagccatacatctgatagggggttcatatccaaaatagacaaggaattcgatctactcaatagcaagaacaccacccaattaataagtgtgcgaataatctgaataatcattGATTTTAAGTGTTTTCAATGCCTAGCATTTACTAATAA-TCTG s panTro4.chr6 170620233 568 + 172623881 cactggagcagtgtagggagcccagaaataaatccacatttttatggtcagttgatctttgagaaattgctaagaatacacaatgg--agaaatgatagtttcctc----aataat-gttgggcaact-ggatgtccatggcaggagagtaggagtgg--atgccaatctcacagtagatacaaaa--ttagcttgaagtgtatcagtgacttaaacg-taagacctgccaatgtaaaactcctagaaaaaaacaagggaaaaagcttcatgacattgctctgggca--gagtctttgaatatgaccccaaaagacaggcaacaaaagcaaaaa-tagacaaatggaattgcatccaaattaaaagcttcttcacaacaaagggaacaagtaaagaatgaagagacagcctatagagtgggagatatttg-aagccatacatctgatagggggttcatatccaacatagacaaggaatttgatctactcaatagcaagaacaccacccaattaataagtgtgcgaataatctgaataatcattGATTTTAAGTGTTTTCAATGCCTAGCATTTACTAATAA-TCTG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172366918 576 + 174210431 cactggagcagtgtagggagcccagaaataaatccacatttttatggtcagttgatcttttaaaaattgctaaaaaaaaccaatggaaaaaaaggacggtttcccc----aataatggcggggcaactgggatgcccttgggaggaaagtaagaatgggaaggccaatcccccactaaaaaaaaaaatttactttaaaggggatccgtgacttaaacgttaagacctgccaatgtaaaactcctagaaagaaacaagggaaaaagctttgtgacattgctctgggca--gagtctttgaatatgaccccaaaagacaggcaacaaaagcaaaaa-tagtcaaatggaattgtatccaaattaaaagcttcttcacagcagaaagagcaagtaaagaacgaagagacagcctatagagcaggaggtatttg-aagccacacatctgataggcttgtc-tatccaaaatagacaaggaatttcatctactcaatagcaagaacaccacccaattaataagtgagcaaataatctgaataattattGATTTTAAGTGTTTTCAATGCCTAGCATTTACTAATAA-TCTG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156235897 566 + 157873769 cactggagcagtgtagggagcccagaaataaatccacatttttatggtcagttgatctttgagaaattgctaagaatacacaatgg--agaaatgatagtttcctc----aatagt-gttgggcaact-ggatgtccatggcaggagagtaggagtgg--atgccaatctcacactagatacaaaa--ttagcttaaagtgtatcagtgacttaaacg-taagacctgccaatgtaaaactcctggaaaaaaacaagggaaaaagcttcatgccattgctctgggc----agtctttcaatatgaccccaaaagacaggcatcaaaagcaaaaa-tagacaaatggaattgcatccaaattaaaagcttcttcacaacaaagggaacaagcaaagaatgaagagacagcctatagagtgggagatatttg-aagccatacatctgatagggggttcatatccaaaatagacaaggaattcaatctactcaatagcaagaacaccacccaattaataagtgtgcaaataatctgaataatcattGATTTTAGGTGTTTTCAATGCCTAGCATTTACTAATAA-TCTG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168051905 572 + 169853907 caatggagcgatgtagggagcccagaaataaatccacatttttatggtcagtagatctttgagaaattgctaagactacacaatgg--agaaatgatagtttcctcaataaatagt-gttgggcaact-ggatgtccatggcaggagagtaggagtgg--acgccaatctcacactagacacaaaa--ttagcttaaagtgtatcagtgacttaaatg-caagacctgccaatgtaaaactcctagaaa-aaacaagggaaaaagcttcatgacattagtctgggca--gagtctttgaatatgaccccaaaagataggcaacaaaagaaaaaaaaagacaaatggaattgcatccaaattaaaagcttcttcacaacaaagggaacaagtaaagactgaaaagacagcctatggagtgggagatatttg-aagccatacagctgatagggggttcatatccaaaatagacaaggaattctatctacttaatagcaagaacaccacccaattaataagtgagcaaataatctgaatTATCATTGATTTTATGTGTTTTCAATGCCTAGCATTTACTAATAA-TCTG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169007791 572 - 170955103 caatggagcgatgtagggagcccagaaataaatccacatttttatggtcagtagatctttgagaaattgctaagactacacaatgg--agaaatgatagtttcctcaataaatagt-gttgggcagct-ggatgtccatggcaggagagtaggagtgg--acgccaatctcacactagacacaaaa--ttagcttaaagtgtatcagtgacttaaatg-caagacctgccaatgtaaaactcctagaaa-aaacaagggaaaaagcttcatgacattagtctgggca--gagtctttgaatatgaccccaaaagataggcaacaaaagaaaaaagaagacaaatggaattgcatccaaattaaaagcttcttcacaacaaagggaacaagtaaagactgaaaagacagcctatggagtgggagatatttg-aagccatacagctgatagggggttcatatccaaaatagacaaggaattctatctacttaatagcaagaacaccacccaattaataagtgagcaaataatctgaatTATCATTGATTTTATGTGTTTTCAATGCCTAGCATTTACTAATAA-TCTG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163819720 571 + 165299245 CAATGGAGCGGTGtagggagcccagaaataaatccacattttTATGGTCAGtagatctttgagaaattgctAAGACTACACAATGG--AGAAATGATAGTTTcctcaataaatagt-gttgggcaACT-GGATGTCCGTGGCAGAAGAGTAGGAGTGG--ACGCCAATCTCACACTAGACACAAAA--TTAGCTTAAAGTGTATCAGTGACTTAAATG-CAAGACCTGCCaatgtaaaactcctagaaa-aaacaagggaaaaagcttcatgacattagtCTGGGCA--GAGTCTTTGAATATGACCCCAAAAgataggcaacaaaagaaaaaa-aagacaaatggaattGCATCCAAATTAAAAGCTTCTTCACAACAAAGGGAACAAGTAAAGACTGAAAAGACAGCCTATGGAGTGGGAGATATTTG-AAGCCATACATCTGATAGGGGGTTCATATCCAAAATAGACAAGGAATTCAATCTACTTAATAGCAAGAACACCACCCAATTAATAAGTGAGCAAATAATCTGAATTATCATTGATTTTATGTGTTTTCAATGCCTAGCATTTACTAATAA-TCTG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96603921 570 + 98384682 caatggagcggtgtagggagcccagaaataaatccacatttttatggtcagttgatctttgagaagttgctaagactacacaatgg--agaaatgatagtttcctcaataaataat-gttgggcaact-ggatgtcaatggcaggagagtaggagtgg--acgccaatctcacactagatacaaaa--ttagcttaaagtgtatcagtgacttaaatg-caagacctgccaatgtaaaactcctagaaa-aaacaagggaaaaagcttcatggcattggtgtgggca--gagtctttgaatatgaccccaaaagataggcaacaaaagaaaaa--aagacaaatgcaattgcgtccaaattaaaagcttcttcacaacaaagggaacaagtaaagactgaaaagacagcctatggagtgggagatatttg-aagccatacgtctgatagggggttcatatccaaaatagacaaggaattcaatctactcaatagcaagaacaccacccaattaataagtgagcaaataatctgaatTATCATTGATTTTATGTGTTTTCAATGCCTAGCATTTACTAATAA-TCTG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169809710 569 + 171630274 cagtgcagcagggtggggagtccagaaatcagtccacg-ttttacagtccgttggtctttgccaaattgctaagaacacacagtgg--agaaataatcgtaccctcaataaatagt-gctgggcacct-gaatgtccacgacaggagagtaagagtgg--acgtcgattttacgctagatacaaaa--ttagcttaaagtgtatccgtgacttaaata-taagacctgcaaatataaaactccgagaag-aaacaaggg-agaagtttcatgacactggtctgggcaaggagtttttgaacatgatcccaaaacacaggcaacaa---caaaaa-tagagaaatggaattgcatcggaatgaaaagcttctccacaacaaagggaagaagtaaggagtggagagacggccgctggggcgggcgatgtgtgcaggccacacatccgatagggacgtcctctccaaagtgcacaaggaatcc-atctgccgaatagcaagaacacaacccaatcaataagtcagcaaaaactctgaataatcattgatttcaaGCCTTTTCAGGGCCTAGTATTTACTAATAACCCTG i calJac3.chr4 I 431 C 0 e canFam3.chr1 56100422 0 + 122678785 C a score=2662265.000000 s hg38.chr6_KB021644v2_alt 6889 921 + 185823 TGACACAGGAATAGAGCCACACCCTCAAATTTACGCTTTTATGAATTACCTAAAGGAAGTTTCGATCAACTGTCAACTGAAGGATCGGACTATGATTACAGATTTCTCAGTATTCTTCCTGCCTCTCACCTCCCCCCCGCCCCAAG-TCCCCTGCACACCATGCACACCCACGGGTCTTCTCAAAACTGTGGATTTTGTCTTGCCAGCCCTACTGCGATATTTCACTGGCTTCGTGTTGCTTTTGTGAGA---CGTAAACCTTCACAGTGGGTGTGGGTGTGGCACACTCGCGCTGACTTTGCTTCGCATGCGCCCTGACCTGGCCTGGTGCAGTGCTGTCTCCTGTCTCCACTCCCCATCCTCCAAGGAAGCCCAGGCTTCACGGGAAGAGTGCCCTAAATACCACTTTCCCTTCTCTGGGACC--CCAACCCTGCCGTCTTCAT---CTCCCTCTGTACCT-ATGGA-AAATGACT--GCAATTTCAACAGTTCTTTCTAGAGGCTGGGTTTGGGCACCTCGATTAGACTATGAACTTGTAGGTGTCAGGAGTCACACATCTTTCTTTTCTGTCACCTTCCCGCCAGTCGG--TTTCTGCAACCAACACACACGGT---TCGTC-GCTGTGAGTCAGCCTGTGGACTGGAAAGGCGG----GGCATGGCACACAGGGACAGCGCTGAACTTTCCAAACCACAGGAAGAAATCAGCATTTTTGGAAGAACAAGTGAGTGGATGAATGAAT--------------GCCGTCGAGATGGCTGAGAAAACAGTTGCATGGAAGGG--------------------AGGAGAAATTCTTCTGGTTGTGGGGGAGGTGATT-------Tgggattaggaaaagcttcatgg--aagaattgacatctgttctgggATGAGATTTTGATGTTTGGAGACAATGCAGAACA----TTTCATGAACAAGGAATAAAACGCATGGTTTTCTGAGAaaaa s panTro4.chr6 170620801 922 + 172623881 TGACGCAGGAATAGAGCCACACCCTCAAATTTACGCTTTTATGAATTACCTAAAGGAAGTTTCGATCAACTGTCAACTGAAGGATTGGACTATGATTACAGATTTCTCAGTATTCTTCCTGCCTCTCACCTCCCCTCCGCCCCAAG-TCCCCTGCACACCATGCACACCCACGGATCTTCTCAAAACTGTGGATTTTGTCTTGCCAGCCCTACTGCGATATTTCACTGGCTTCGTGTTGCTTTTGTGAGA---CGTAAACCTTCACAGTGGGTGTGCGTGTGGCGCACTCGCGCTGACTTTGCTTCGCGTGCGCCCTGACCTGGCCTGGTGCAGCGC-GTCTCCTGTCTCCACTCCCCATCCTCCAAGGAAGCCCAGGCTTCATGGGAAGAGTGCCCTAAATACCACTTTCCCTTCTCTGGGACC--CCAACCCTGCCGTCTTCAT---CTCCCTCTGTACCT-ATGGA-AAATGACTCTGCAATTTCAACAGTTCTTTCTAGAGGCTGGGTTTGGGCACCTCGATTAGACTATGAACTTGTAGGTGTCAGGAGTCACACATCTTTCTTTTCTGTCACCTTCCCGCCAGTCGG--TTTTTGCAACCAACACACACGGT---TCATC-GCTGTGAGTCAGCCTGTGGACTGGAAAGGCGG----GGCATGGCACTCAGGGACAGCGCTGAACTTTCCAAACCACAGGAAGAAATCAGCATTTTTGGAAGAACAAGTGAGTGGATGAATGAAT--------------GCCGTCAAGATGGCTGAGAAGACAGTCGCATGGAAGGG--------------------AGGAGAAATTCTTCTGGTTGTGGGGGAGGTGATT-------Tgggattaggaaaagcttcatgg--aagaattgacatctgttctgggATGAGATTTTGATGTTTGGAGACAATGCAGAACA----TTTCATGAACAAGGAATAAAACGCATGGTTTTCTGAGAAAAA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172367494 925 + 174210431 TGATGCAGGAATAGAGCCACACCCTCAAATTTACGCTTTTGTGAATTACCTAAAGGAAGTTTCAATCAACTGTCAACTCAAAGATCGGACTATGATTACAGATTTCTCAGTATTCTTCCTGCCTCTCACCTCCCC-CCGCCCCAAG-CCCCCTGCACACCATGCACACCCACGTGTCTTCTCAAAACTGTGGATTTTGTCTTGCCAGCCCTACTGAGATGTTTCACTGGCTTCGTGTTGTTTTTGTGAGA---CGTAAAGCTTCACAGTGGGTGTGGGTGTGGCACACTGGCGCTGACTTTGCTTCGCATTCGCCCTGACCTGGCCTGGTGCAGCGCTGTCTCCTGTCTCCACTCCCTATTCTCCAAGGAAGCCCAGGCTTCATGGGAAGAGTGCCCTAAATACCACTTTCCCTTCTCTGGGACC--CCAACCTTGCTGTCTTCAT---CTCCCTCTGTACCT-ATGGA-AGATGACTCTGCAATTTCAACAGTTCTTTCTAGAGGCTGGGTTTGGGCACCTCGATTAGACTATGAACTTGTAGGTGTCAGGGGTCACACATCTTTCTTTTCTGTCACTTTCCTGCCATTCGG--TTTCTGCAACCAACACACACGGTTCATCATC-ACTGTGAGTCAGCCTGTGGACTGGAAAGGCGG----GGCATGGCACACAGGGACAGCGCTCAACTTTCCAAACCGCAGAAAGAAATCAGCATTTTTGGAAGAACAAGTGAGTGGATGAATGAAT--------------GCCATCAAGATGACTGAGAAGACAGTCGCATGGGAGGG--------------------AGGAGAAATTCTTCTGGTTGTGGGGGAGGTGATT-------Tgggattaggaaaagcttcatag--aagaattgacatctgttctgggatgaaATTTTGATGTTTGGAGACAATGCAGAACA----TTTCATGAACAAGGAATAAAACGCATGGTTTTCTGAGAAAAA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156236463 926 + 157873769 TGATGCAGGAGTAGAGCCACACCCTCAAATTTATGCTTTTATGAATTACCTGAAGGAAGTTTCGGTCAACTGTCAACTCAAGGATCGGACTCTGATTACAGATTTCTCAGTATTCTTCCTGCCTCTCACCTCCCC-CCTCCCCAAGCCCCCCTGCACACCATGCACACCCACGTGTCTTCTCAAAACTGTGGATTTTGTCTTGCCATCCCTACTGAGATATTTCACTTGCTTCGTGTTGTTTTTGTGAGA---TGTAAACCTTCACAGTGGTTGTGGGTGTGGCACACTCGCGCTGACTTTGCTTCACATTCGCCCTGACCTGGCCTGGTGCAGTGCTGTCTCCTGTCTCCACTCCCCATCCTCCAAAGATGCCCAGGCTTCATGGGAAATGTGCCCTAAATACCACTTTCCCTTTTCTGGGACC--CCAACCCTGCCGTCTTCATCTCCTCCCTCTGTACCT-ATGGA-AAATGACTCTGCATTTTCAACAGTTCTTTCTAGAGGCTGGGTTTGGGCACCTCGATTAGACTGTGAACTTGTAGGTGTCAGGGGTCACACATCTTTCTTTTCTGTCACTTTCCCACCAGTCGG--TTTCTGCAACCAACACACACGGT---TCATC-GCTGTGAGTCAGCCTGTGGACTGGAAAGGCAG----GGCATGGCGCACAGGGACAGCGTTGAACTTTCCAAACCGCAGAAAGAAATCAGCATTTTTGGAAGAACAAGTGAGTGGATGAATGAAT--------------GCCATCGAGATGGCTGAGAAGACAGTCACATGGGAGGG--------------------AGGAGAAATTCTTCTGGTTGTGGGGGAGGTGATT-------Tgggattagggaaagcttcatgg--aagaattgacatctgttctgggATGAGATTTTGATGTTTGGAGACAATGCAGAACA----TTTCATGAACAAGGAATAAAACTCATGGTTTTCTGAGAAAAA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168052477 920 + 169853907 TGATGCAGGAATAGAGCCACACCCTCAAATTTACGCTTTTATGAATTACCTGAGGGAAGTTTTGGTCAACTGTCAACTCAAGGATCGGACTATGATTACAGATTACTCATTATTCTTCCTGCCTTTCACCTCCCA-CCACCCCAGTTCCCCCTGAATACCATGCACACCCACGTGTCTTCTCAAAACTGTGGATTTTGTCTTGCCAGCCCTACTGAGGTATTTCACTGGCTTTGTGTTGTTTTTGTGAGA---CATAAACCTTCACAGTGGGTGTGGGTGTGGCACTCTCGCACTGACTTT-CTTTGCATTCGCCCTGACCTGGCCTGGTGCAGCGCTGTCTCCTGTCTCCACTCCCCATCCTCCAAGGAGGCCCAGGCTTCATGGGAAGCGTGCCCTAAATACCGCTTTCCCTTCTCTGGGACC--CTAGCCCTGCTGTCTTTGT---CTCCCTCTGTACCT-ACGGA-AAAGGACTCTGCAATTTCAACAGTCCTTTCTAGAGGCTGAGTTTGGGCACCTTGATTAGACTGTGAACTTGTAGGTGTCAGGGGTCACACATCTTTCTTTTCTGTCGCCTTCCTGCCAGTCGG--TTTCTGCAACCAACATACGTGGT---TCATT-GCCGCGAGTCAGCCTGTGGACTGGGAAGGTGG----GACATGGCACACGGGGACAGCACTGCACTTCCCAAACCACAGAAGGAAATCAGCA-TTTTGGAAGAACAAGTGAGTGGATGAATGAAT--------------GCGGTTGAAATGGCTGAGAAGACAGTCGCATGGGAGGG--------------------AGGACAAATTCTTCTGGTTGTGGGGGAGGTGATT-------CGGGATAAGG-AAAACTTCGTGG--AAGAATTGACATCTGTTCTGGGATGAGATTTTGATGTTTGGAGACATTGCAGAACA----TTTCATGAACAAGGAATAAAATGCATGGTTTTCTGAGAAAAA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169008363 920 - 170955103 TGATGCAGGAATAGAGCCACACCCTCAAATTTACGCTTTTATGAATTACCTGAGGGAAGTTTTGGTCAACTGTCAACTCAAGGATCGGACTATGATTACAGATTACTCAGTATTCTTCCTGCCTTTCACCTCCCA-CCGCCCCAGTTCCCCCTGAATACCATGCACACCCACGTGTCTTCTCAAAACTGTGGATTTTGTCTTGCCAGCCCTACTGAGGTATTTCACTGGCTTTGTGTTGTTTTTGTGAGA---CATAAACCTTCACAGTGGGTGTGGGTGTGGCACTCTCGCACTGACTTT-CTTTGCATTCGCCCTGACCTGGCCTGGTGCAGCGCTGTCTCCTGTCTCCACTCCCCATCCTCCAAGGAGGCCCAGGCTTCATGGGAAGCGTGCCCTAAATACCGCTTTCCCTTCTCTGGGACC--CTAGCCCTGCTGTCTTTGT---CTCCCTCTGTACCT-ACGGA-AAAGGACTCTGCAATTTCAACAGTCCTTTCTAGAGGCTGAGTTTGGGCACCTTGATTAGACTGTGAACTTGTAGGTGTCAGGGGTCACACATCTTTCTTTTCTGTCACCTTCCTGCCAGTCGG--TTTCTGCAACCAACATACGTGGT---TCATT-GCCGCGAGTCAGCCTGTGGACTGGGAAGGTGG----GACATGGCACACGGGGACAGCACTGCACTTCCCAAACCACAGAAGGAAATCAGCA-TTTTGGAAGAACAAGTGAGTGGATGAATGAAT--------------GCGGTTGAAATGGCTGAGAAGACAGTCGCATGGGAGGG--------------------AGGACAAATTCTTCTGGTTGTGGGGGAGGTGATT-------CGGGATAAGG-AAAACTTCGTGG--AAGAATTGACATCTGTTCTGGGATGAGATTTTGATGTTTGGAGACATTGCAGAACA----TTTCATGAACAAGGAATAAAATGCATGGTTTTCTGAGAAAAA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163820291 920 + 165299245 TGATGCAGGAATAGAGCCACACCCTCAAATTTACGCTTTTATGAATTACCTGAAGGAAGTTTTGGCCAACTGTCAACTCAAGGATCGGACTATGATTACAGATTACTCAGTATTCTTCCTGCCTCTCACCTCCCA-CCGCCCCAGTTCCCCCTGAATACCATGTGCACCCACGTGTCTTCTCAAAACTGTGGATTTTGTCTTGCCAGCCCTACTGAGGTATTTCACTggctttgtgttgtttttgtgagA---CGTGAACCTTCAcagtgggtgtgggtgtggcACTCTCGCACTGACTTT-CTTTGCATTCGCCGTGACCTGGCCTGGTGCAGCGCTGTCTCCTGTCTCCACTCCCCATCCTCCAAGGAAGCCCAGGCTTCATGGGAAGTGTACCCTAAATACCGCTTTCCCTTCTCTGGGACC--CTAGCCCTGCTGTCTTCGT---CTCCCTCTGTACCT-ACGGA-AAAGGACTCTGCAATTTCAACAGTCCTTTCTAGAGGCTGAGTTTGGGCACCTCGATTAGACTGTGAACTTGTAGGTGTCAGGGGTCAcacatctttcttttctgtcacctTCCTGCCAGTCGG--TTTCTGCAACCAACATACGTGGT---TCATT-GCCGCGAGTCAGCCTGTGGACTGGAAAGGTGG----GACATGGCACACGGGGACAGCACTGCACTTCCCAAACCACAGAAGGAAATCAGCA-TTTTGGAAGAACAAGTGAGTGGACGAATGAAT--------------GAGGTTGAAATGGCTGAGAAGACAGTCGCATGGGAGGG--------------------AGGACAAATTCTTCTGGTTGTGGGGGAGGTGATT-------TGGGATAACG-AAAACTTCGTGG--AAGAATTGACATCTGTTCTGGGATGAGATTTTGATGTTTGGAGACATTGCAGAACA----TTTCATGAACAAGGAATAAAATGCATGGTTTtctgagaaaaa i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96604491 919 + 98384682 TGATGCAGGAATAGAGCCACACCCTCAAATTTACGCTTTTATGAATTACCTAAAGGAAGTTTTGGTCAACTGTCAACTCAAGGATCGGACTATGATTACAGATTACTCAGTATTCTTCCTGCCTCTCACCTCCCA-CCGCCCCAGTTCCCCCTGAATACCATGCGCACCCACGTGTCTTCTCAAAAC--TGAATTTTGTCTTGCCAGCCCTACTGAGGTATTTCACTGGTTTTGTGTTGTTTTTGTGAGA---CGTAAACCTTCACAGTGGGTGTGGGTGTGGCACTCTCACACTGATTGT-CTTCGCATTCGCCCTGACCTGGCCTGGTGCAGCGCTGTCTCCTGTCTCCACTCCCCGTCCTCCAAGGAAGCCCAGGCTTCACGGGAAGTGTGCCCTAAATACCGCTTTCCCTTCTCTGGGACC--CTAGCCCTGCTGTCTTCGT---CTCCCTCTGTACCT-ACGGA-AAATGACTCTGCAATTTCAACAGTCCTTTCTAGAGGCTGGGTTTGGGCACCTCGATTAGTCTGTGAACTTGTAGGTGTCAGGGCTCACACATCTTTCTTTTCTGTCACCTTCCTGCCAGTCGG--TTTCTGCAACCAACATACGTGGT---TCATT-GCCGTGAGTCAGCCTGTGGACTGGAAAGGTGG----GACATGGCACACGGGGACAGCACTGAACTTCCCAAACCACAGAAGGAAATCAGCA-TTTTGGAAGAACAAGTGGGTGGATGAATGAAT--------------GCAGTTGAAATGGCTGAGAAGACAGTTGCATGGGAAGG--------------------AGGACAAATTCTTCTGGTTGTGGGGGAGGTGATT-------TGGGTTTAGGAAAAACTTCATGG--AAGAATTGACATCTGTTCTGGGATGAGATTTGGATGTTTGGAGACAATGCAGAACA----TTTCATGAACAAAGAATAAAATGCATGGGTTTCTGAGAAAAA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169810279 865 + 171630274 TGATGCGTGACTACAGCTACACCTCTGAACTGACACTTTTATGAATTGCCTAAAGCAAG--TCACTCACCTGTGCAGTCAAGGATTGCACTGCGATCACAGAGTTCTCCGTGTTCTTCCTGCCTCTCACCTCCCT------------------GCACCCCATGCACACCCACGTGTCTTC----AA-----------GTCTTGCCAGCCCTACTGAGATGTTTCACCAGCTTCGTGTTGTTTTTGTGAGA---CATGGACCTTCACGGTGGGTATGGGTCTGCCACCTGCACA---GCTCTGCTCCACGTTCTCCCTGGCCTGGCCTGGCGCTGTGGCATCTCCAGTCTCCACTC---ACCCTCCAGGGAAACCCAGGCTTCACGGGAAGTGTGCCCTGAAAACTGCTTTCCTTGCTCTGGGGCC--CCAGCCCTGCTGAGTTCAC---CACCCTCTGTACCC-ACGGA-AAACGACTCTGCAATTTGAACCGTCCTTTCTAGAAGCTGGGTTTTGGCACCCCAATTAGACTGTGAACTTGGAGGTGTCACAGGTCACACATCTTTCTTTTCTGTCACCTTC----------------------CCCACACCCGCGGT---TCATC-ACCAGGAGTCAGCCTGTGGACTGGGGGGGCGGGCCCGGTCTGGCACACGGGGTCAGC--TGAACTTCCCAAACCACAGAAGGAAACTGGAGTTTTTGGAGGAACACGTGAGTGGAC-AAGGACT--------------GCCGTGGACATGACAGAGAAGACAGT-GCAT-GCAGGG--------------------AGGAGAGATTCTTCTGGATTCGGGGGAGGTGGTT-------TGGGATTAGG-AAAGCTTCATGG--GAGAATTGACATTTGTTCTGGGGTGAGATTTTGATGTTTGGAGACAATGCAGAATGTTATTTTCATGAACAAGGAGTAAAATGTATGGTTTTCTTAGGAAAA i calJac3.chr4 C 0 C 0 s canFam3.chr1 56100422 852 + 122678785 TGATGTAGATATAGATCCATACGCTT-ACTTTTTGATATTATAAGTCACTTACAGCAAATTGCAACCAAATGGCAAGTCAAGGATTTGACTGTTCTAACAGATTCCCAGTAATTCCGTCTGTCTGCCACCAATCC-TCCTTCCACGCCCTCCT--ACTTCACACTCACCCACACGTTTTCCTAAAGA-GTGGATTTTATCACGCCAGCCCAAGTCATGCATTTCGGTG----------------GTGAGAATGCAGACAGGGTCAGAGCAGAGGTG-----------CACGTGCTGACCCA-TCCCACACTCACCT------------------------------------------------------------------------------CCCCAAAC-CCACCTTCCTCTTTCCCTGACCTTCCAGTCCTGCTGCCTTCAT-TATACATTTTGTTCTTAATGGATAACGGGGTCTGCATTTTC--TGGTCTTTTCTAGGATCCAGATCTCGACACCTCTGGTAGACTACAAACTTCTTGGTATCAAGGATCATGTTTCCCTCTTTTC--TCACCTCCCTTCCACAGGGAATTTGTTCAATCAGCACATGTGGT---TCATCTGCTCTAAATGAGCAGGTGTACTAGGAAATTGT----GTGGTGCTAAACA---------------TTTCCCAATGCTAGAGTGGAATAAAGACTTTTCAAAGAATGAATGAATGGCTAAGGGGATCAGAGACATGGCTGGAAGGTGACATTGCTGAGGGGTCGGCTGCCTAGGAAGGCTTTCTGTCCCAGGTAGGATGGGGCACCTGTCCTGGGCTGGAAGGGACACATGTCCCAGGCTGGGATGGGACACCTGTTCTGGGCTGGGATTGGGCACCTGTCCTGGGATGAGATTTTGATTATTGGAGAAAATGTGAAATTCTGTATCAATGAACAAGAAATAAAACACACAATTTTCTATGGAAAA i canFam3.chr1 C 0 I 12 a score=718369.000000 s hg38.chr6_KB021644v2_alt 7810 328 + 185823 agtaaataatctgggccaggtgcagcagctcacgcctgtcatcccagcacgttgggaggttgaggagggaggatcacttgagcccaggagttcaaaaccagccaggagaacatagggagactcccatatctacaaaataaaaataaaaataaaaattagctaggcatTATTATATTA-TAAAAACAAAAATAAAAAAATATTTT---ATAAAA-TAATATTAAAATAAAAATtagctcatgcctgtggtctcagctactcagtaggctgaggtgggaggatcacttgagcccaggaggccaaggctgcagaaagctgtgattgtgcccctcac s panTro4.chr6 170621723 328 + 172623881 AGTAAATAATCTGggccaggtgcagcagctcacgcctgtcatcccagcacgttgggaggtcgaggagggaggatcacttgagcccaggaattcaaaaccagccaggagaacatagggagactcccatatctacaaaataaaaataaaaatAAAAATTAGCTAGGCattattatatta-taaaaacaaaaataaaaaaatatttt---ataaaa-taatattaaaataaaaattagctcacgcctgtggtcccagctactcagtaggctgaggtgggaggatcacttgagcccaggaggccaaggctgcagaaagctgtgattgtgcccctcac i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172368419 327 + 174210431 AGTAAATAATCTGggcccggtgcagcagctcatgcctgtcatcccagcatgttgggaggccgaggacggaggatcgcttgagcccaagagttcaagaccagccagggaaacatagggagactcccatctctacaaaataaaaataaaaataaaaattagccaggcattattatatta-taaaaacaaaaat-aaaacatatttt---ataaaa-taatattaaaataaaaattagctcacgcctgtggtcccagctattcagtaggctgaggtgggaggatcacttgagcccagggggccaaggctgcagaaagctgtgatcgtgcccctcac i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156237389 321 + 157873769 AGTAAATAATCTGggcaggatgcagcagctcacgcctgtcatcccagcatgttgggaggcccaggagggaggatcgcttgagcccaggagttcaagaccagccaggggaacatagggagactcccatctctac------aaaataaaaataaaaattagccaggcatTATTATATTA-TAAAAACAaaaat-aaaaaatatttt---ataaaa-taatattaaaataaaaATtagctcacgcctgtggtcccagctactcagcaggctgaggtgggaggatcacttgagcccaggaggccaaggctacagagagctgtgatcgtgcccctcac i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168053397 251 + 169853907 AGTAAATAATCTGggccgggtgcagcagctcacgcttgtcatcctagcactctgggaggccaaggcaggaggatcgcttgagcccaggagttcaagaccagccaagggaacatagggagactcccatctctac------aaaata----------------------------------------------------------------------------aaaataaaaattagctcacgcctgtggtcccagctactcagtaggctgaggtgggaggatcacttgagcccaggaggccaaggctgcagagagctgtgactgtgcccctcac i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169009283 251 - 170955103 AGTAAATAATCTGggccgggtgcagcagctcacgcttgtcatcctagcactctgggaggccaaggcaggaggatagcttgagcccaggagttcaagaccagccaagggaacatagggagactcccatctctac------aaaata----------------------------------------------------------------------------aaaataaaaattagctcacgcctgtggtcccagctactcagtaggctgaggtgggaggatcacttgagcccaggaggccaaggctgcagagagctgtgactgtgcccctcac i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163821211 251 + 165299245 agtaaataatctgggccgggtgcagcagctcacgcctgtcatcctagcactctgggaggccgaggcaggaggatcgcttgagcccaggagttcaagaccagccaggggaACATAgggaaactcccatctctac------aaaata----------------------------------------------------------------------------aaaataaaaattagctcacgcctgtggtcccagctactcagtaggctgaggtgggaggatcacttgtgcccaggacgccaaggctgcagagagctgtgactGTGCCCCTCAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96605410 251 + 98384682 AGTAAATAATCTGggccaggtgcagcagctcacgcctgtcatcctagcactctgggaggccaaggcaggaggatcgcttgagcccaggagttcaagaccagccaggggaacacagggagactcccatctctac------aaaata----------------------------------------------------------------------------aaaataaaaattagctcaagcctgtggtcccagctactcagtaggctgaggtgggaggatcacttgagcccaggaggccaaggctgcagagagctgtgactgtgcccctcac i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169811144 325 + 171630274 AGTAAATAATCTGggctgggtgcagcagtccacacgtgtcattctggcacattggaaggttgaggcggggtgattgcttcagcccaggggttcaagtccagccgtggccacacagggagattcccttctctac------aaaataaaaataaaaaTTAGCCA-GCATTGTTATAGTATtaaaaacaaaaataaaaaagtcttataaaataaaattaaaatataaataaaaatgagctcacgcctgtggtcccagctactcagtaggctgaggtgggaggatcacttgggcccacgaggttgaggctgcagagagctgtgactgca-ccctcac i calJac3.chr4 C 0 C 0 e canFam3.chr1 56101274 12 + 122678785 I a score=843070.000000 s hg38.chr6_KB021644v2_alt 8138 263 + 185823 ttcagcTATAAAGGGACAGCTGAGTTTCT-AACAAAGCTTAATTCATCAAAGCAGTATGTTTCAATGACATACAAGAGACTAGCTTTAGAGAGTTTAT------------CAAAGTAA--CTTCCCACAAGTATTTTAATAATA----AATATTCTAAGTAGCTTTAAGCTGCATTTATGTACAGTGAAATCATAATTGTGTTGATTTTAAAAAAAGAACCAAAAAGCCCCCTAAAAGCTTCTGTTGTCTTTCATTCTGCATACCCGGGTGCCTGGGACTCC s panTro4.chr6 170622051 263 + 172623881 ttcagcTATAAAGGGACAGCTGAGTTTCT-AACAAAGCTTAATTCATCAAAGCAATATGTTTCAATGACATACAAGAGACTAGCTTTAGAGAGTTTAT------------CAAAGTAA--CTTCCCACAAGTATTTTAATAATA----AATATTCTAAGTAGCTTTAAGCTGCATTTATGTACAGTGAAATCATAATTGTGTTGATTTTTAAAAAAGACACAAAAAGCCCCCTAAAAGCTTCTGTTGTCTTTCATTCTGCATACCCGGGTGCCTGGGACTCC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172368746 262 + 174210431 ttcagcTATAAAGGGACAGCTGAGTTTCT-AACAAAGCTTAATTCATCAAAGCAATATGTTTCAATGACATACAAGAGACTAGCTTTAGAGAGTTTAT------------CAAAGTAA--CTTCCCACAAGTATTTTAATAATA----AATATTCTAAGTAGCTTTAAGCTGCATTTACGTACAGTGAAATCATAATTGTGTTGATTTT-AAAAAAGAACCAAAAAGCCCCCTAAAAGCTTCTGTTGTCTTTCATTCTGCATACCCGGGTGCCTGGGACTCC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156237710 260 + 157873769 ttcagcTATAAAGGGTCAGCTGAGTTTCT-AAAAAAGCTTAATTCATCAAAGCA--ATGTTTCAATGACATACAAGAGACTAGCTTTAGAGAGTTTAT------------CAAAGTAA--CTTCCCACAAGTATTATAATAATA----AATATTCTAAGTAGCTTTAAGCTGCATTTGTGTACAGTGAAATCATAATTGTGTTGATTTT-AAAAAAGAACCAAAAAGCCCCCTAAAAGCTTCTGTTGTCTTTCATTCTGCATACCCGGGTGCCTGGGACTCC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168053648 262 + 169853907 ttcagcTATAAACGGACAGCTGAGTTTCT-AATAAAGCTGAATTCATCACAGCAATATGTTTCAATGAGATGAAAGAGACTAGCTTTAGAGAGTTTAT------------CAAAGTAA--CTTCCCACAAGTATTTTAATAATA----AATATTCTAAGTAGCTTTAAGCTGCATTTATGCACAGTGAAATCATAATTGTGTTGATTTT-AAAAAAGAACCAAAAAGCCCCCTGAAAGCTTCTGTTGTCTTTCATTCTGCATACCCAAGTGCCTGGGACTCC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169009534 262 - 170955103 ttcagcTATAAACGGACAGCTGAGTTTCT-AATAAAGCTGAATTCATCACAGCAATATGTTTCAATGAGATGAAAGAGACTAGCTTTAGAGAGTTTAT------------CAAAGTAA--CTTCCCACAAGTATTTTAATAATA----AATATTCTAAGTAGCTTTAAGCTGCATTTATGCACAGTGAAATCATAATTGTGTTGATTTT-AAAAAAGAACCAAAAAGCCCCCTGAAAGCTTCTGTTGTCTTTCATTCTGCATACCCAAGTGCCTGGGACTCC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163821462 262 + 165299245 TTCAGCCATAAACAGACAGCTGAGTTTCT-AATAAAGCTTAATTCATCACAGCAATATGTTTCAATGAGATGAAAGAGACTAGCTTTAGAGAGTTTAT------------CAAAGTAA--CTTCCCACAAGtactttaataata----aatattctaagTAGCTTTAAGCTGCATTTATGCACAGTGAAATCATCAtagtgttgatttt-taaaaagaaccaaaaagcCCCCTGAAAGCTTCTGTTGTCTTTCATTCTGCATACCCGAGTGCCTGGGACTCC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96605661 262 + 98384682 ttcagcTATAAACGGACAGCTGAGTTTCT-AATAAAGCTTAATTCATCACAGCAATATGTTTCAATGAGATGAAAGAGACTAGCTTTAGAGAGTTTAT------------CAAAGTAA--CTTCCCACAAGTATTTTAATAATA----AATACTCTAAGTAGCTTTAAGCTGCATTTATGCACAGTGAAATCATAATTGTGTTGATTTT-TAAAAAGAACCGAAAAGCCCCCTGAAAGCTTCTGTTGTCTCTCGTTCTGCATACTTGAGTGCCTGGGACTCC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169811469 261 + 171630274 ttcagcTACAAAGGGACAGCTGAGTTTCT-AACCAAGCTTAATTTATCAAAGCAGTATGTTTCAA-----------AGACTAGCTTTAGAGAGTTTATAACAGGCAAAAACAAAGTAA--TTTCCCACAAGTATTTTAACAATA----AATA-TCTAAGAAGCTTTAAGCTGCATTTATGCACACTGAAATAATAACTGTGTTGATTTT-AAAGAAGGGCCAAAAAG-CCCCTAAAAGCTTCTGTTGTCTATCATCCTGCATGCCCGGGTGCCTGGGATGCT i calJac3.chr4 C 0 C 0 s canFam3.chr1 56101286 247 + 122678785 TTCTGCTATAAAA----ATCTGAGTTCCCAAACAAAGCTTAATTCATCAAAACAGTA-GTTTCCATAAAATAAAAGAGGCTAGCTTTGGAAAATTTATGAAAGACAATAACAAAGTCATTTTTCTTCTAGGTATTTTAATAATATTTTAACATTTTATGTAGTTTTGAGCTGCATGTGTACACTCTGAAATAATAACTTTGTTAAT----AAGAATGGACCCAAAA----CCCTAAAGCTTCT----------------------CAGGTGCCTGAGATTCC i canFam3.chr1 I 12 I 9 a score=1373614.000000 s hg38.chr6_KB021644v2_alt 8401 456 + 185823 T--GCTATTTTTGACCTTGACCTTGCAAGTTTACTGCAGAAGAATTCACAAATTCCAGTGGTAAACAAAAGAAGAAAAGAACCAGATGGCACCAGATAGCTGTTCTCTC-AAAAAAGGAGCTCTGCGAACCCTGTCTTTTCCACTTCAG-------------------------CTTTCCAACACAATGGAGTTTGTaccatataattatttccatcaaaccaggatactttcaaaactggaaaaaggattgttactgtgggaccacaggcctcaatcaggagtttcccgggcaaaGGTGGATGAATGTCAAATGCCAGTCGTGTTCTCTAATCAATTAATCATGCTTTGCTGAATTTGAGTGATGGAAACTTGTACCATACAAGAAATGTCAGTACTCAACTGTGGATAAAGCGTCGTCTTCAGGAGGTGAAATCCATGAGGTTGGGAGTAGGTTAAATTGTGAAGGCCTGTGGATACTATTA s panTro4.chr6 170622314 458 + 172623881 TCTGCTATTTTTGATCTTGACCTTGCAAGTTTACTGCAGAAGAATTCACAAATTCCAGTGGTAAACAAAAGAAGAAAAGAACCAGATGGCACCAGATAGCTGTTCTCTC-AAAAAAGGAGCTCTGCAAACCCTGTCTTTTCCACTTCAG-------------------------CTTTCCAACACAATGGAGTTTGTaccacataattatttccatcaaaccaggatactttcaaaaatggaaaaaggattgttactctgggaccacaggcctcaatcaggagtttcccaggcaaaTGTGGATGAATGTCAAATGCCAGTCATGTTCTCTAATCAATTAATCATGCTTTGCTGAATTTGAGTGATGGAAACTTGTACCATACAAGAAATGTCAGTACTCAACTGTGGATAAAGCGTCGTCTTCAGGAGGTGAAATCCATGAGGTTGGGAGTAGGTTAAATTGTGAAGGCCTGTGGATACTATTA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172369008 458 + 174210431 TCTGCTATTTTTGACCTTGACCTTGCAAGTTTACTGCAGAAGAATTCACAAATTCCAGTGGTAAACAAAAGAAGAAAAGAACCAGATGGCACCAGATAGCTGTTCTCTC-AAAAAAGGAGCTCTGCGAACCCTGTCTTTTCCACTTCAG-------------------------CTTTCCAATGCAATGGAGTTTGTaccatataattatttccatcaaaccaggatactttcaaaaatggaaaaaggattgttaccctgggaccacaggcctcaattaggagtttcccaggcaaaTGTGGATGAATATCAAATGCCAGTCATGTTCTCTAATCAATTAATCATGCTTTGCTGAATTTGAGTGATGGAAACTTGTACCATACAAGAAATGTCAGTACTCAACTGTGGATAAAGTGTCGTCTTCAGGAGGTGAAATCCATGAGGTTGGGAGTAGGTTAAATTGTGAAGGCCTGTGGATACTATTA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156237970 458 + 157873769 TCTGCTATTTTTGACCTTGACCTTGCAAGTTTACTGCAGAAGAATTCAGAAATTCCAGTGGTAAACAAAAGAAGAAAAGAACCAGATGGCACCAGATAGCTGTTGTCTCAAAAAAAGGAGCTCTGCGAACCCTGTCTTTTCCACTTCAG-------------------------CTTTCCAACACAATGGAGTTTGTaccatataattatttccatcaaaccaaaatgctttcaaaaatggaaaaaggattattactctgggaccacaggcctcaatcaggagtttcccaggcaaaTGTGGATGGGTATCAAATGCCAGTCATGTTCTCTAATCAATTAATCATGTTTTGCTGAATTTGAGTGATGGAAACTTGTACCATACAAGAAATGTCAGTACTCAACTGTGGAGAAAGCGTCGTCTTCAGGAGGTGAAATCCATGAGGTTGGGAGTAGGTTAAATTGTGAAGGCC-GTGGATACTATTA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168053910 458 + 169853907 TCTGCTATTTTTGACCTTGACCTTGCAAGTTTACTGCAGAAGAATTCACAAATTCCAGTGGTAAACAAAAGAAGAAAAGAACCAGATGGCACCAGATAGCCGTTCTCTC-AAGAAAGGAGCTCTGCGAACCCTGTCTTTTGCACTTCAG-------------------------CTTTCCAACACAGTGGAGTTTGTACATtataattatttccatcaaaccaggatgctttcaaaaatggaaaaaggattgttactctgggaccacaggcctcagtcaggagtttcccaggcaaatgtggacGAATATCAAGTGCCAGTCATGTTCTCTAATTAATTAATCATGCTTTGCTGAATTTGAGTGATGGAAACTTGTATCATATAAGAAATACCGGTACTCGACTGTGAATAAAGCGTTGTCTTCAGGAGGTGAAATCCATGAGGTTAGGAGTAAGTTAAATTGTGAAGGCCTGTGGATACTATTA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169009796 458 - 170955103 TCTGCTATTTTTGACCTTGACCTTGCAAGTTTACTGCAGAAGAATTCACAAATTCCAGCGGTAAACAAAAGAAGAAAAGAACCAGATGGCACCAGATAGCCGTTCTCTC-AAGAAAGGAGCTCTGCGAACCCTGTCTTTTGCACTTCAG-------------------------CTTTCCAACACAGTGGAGTTTGTACATtataattatttccatcaaaccaggatgctttcaaaaatggaaaaaggattgttactctgggaccacaggcctcagtcaggagtttcccaggcaaaTGTGGATGAATATCAAGTGCCAGTCATGTTCTCTAATTAATTAATCATGCTTTGCTGAATTTGAGTGATGGAAACTTGTATCATATAAGAAATACCGGTACTCGACTGTGAATAAAGCGTTGTCTTCAGGAGGTGAAATCCATGAGGTTAGGAGTAAGTTAAATTGTGAAGGCCTGTGGATACTATTA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163821724 457 + 165299245 TCTGCTATTTTTGACCTTGACCTTGCAGGTTTAGTGCAGAAGAATTCACAAATTCCAGTggtaaacaaaagaagaaaagaaccagATGGCACCAGATAGCTGTTCTCTC-AAAAAAGGAGCTCTTTGAAGCCTGTCTTTTGCACTTCAG--------------------------TTTCCAACACAGTGGAGTTTGTACATTATAATTATTTCCATCAAACCAGGATgctttcaaaaatggaaaaaggattgttactctgggaccacaggcctcaGTCAGGAGTTTCCCAGGCAAATGTGGACGAATATCAAGTGCCAGTCATGTTCTCTAATTAATTAATCATGCTTTGCTGAATTTGAATGATGGAAACTTGGACCATATAAGAAATACCAGTACTCGACTGTGAATAAAGCGTTGTCTTCAGGAGGTGAAATCCATGAGGTTGGGAGTAGGTTAAATTGTGAAGGCCTGTGGATACTATTA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96605923 458 + 98384682 TCTGCTATTTTTGACCTTGACCTTGCAAGTTTACTGCAGAAGAATTCACAAATTCCAGTGGTAAACAAAAGAAGAAAAGAACCAGATGGCACCAGATAGCCATTCTCTC-AAGAAAGGAGCTCTGTGAACCCTGTCTTTTGCACTTCAG-------------------------CTTTCCAACACAGTGGAGTTTGTACATtataattatttccatcaaaccaggatgctttcaaaagtggaaaaaggattgttactctgggaccacaggcctcagtcaggagttttccaggcaaatgtggacGAATATCAACTGCCAGTTGTGTTCTCTAATTAATTAATCATGCTTTGCTGAATTTCAGTGATGGAAACTTGTACCATATAAGAAATGTCAGTACTCGACTGTGAATAAAGCGTTGTCTTCAGGAGGTGAAATCCATGAGGTTGGGAGTAGGTTAAATTGTGAAGGCCTGTGGATACTATTA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169811730 483 + 171630274 TCTGCTAGTTTTGACCTTGACCTTGCAAGTTTACTGAAGAAGAATTCACAAATTCCAGTGATAAACAAAAGGAGAAAAGAACCAGATGGCACTGGATAGCTGTTCTCTCAAAAAAAGGCGCTCTGTGAACACTGTCTTTTGCACTTCAGTTCCCTCGGGCTTTCTCGGTGCATGCTCTCCAACACAACGGAGTTTGTaccacatagttttttcaatcaaaccaggatcctttcaaaaatggaaaaaggattgctactctgggatgacaggcctcactcaggaatttcccaggcaaaTGTGGGTGAATCTCAAGTGCCAGTCATATTCTCTAATCAATTACTCATGCTTTGCTAAATCTGAGTAATGAAAACTTGCACCATAAAAGAAGTGTCAGTACTCAGCT-CAGAGAAAGCATGGACTTCAGGAGGTGACATCCATGAGGTTGGGAGTAGGTTAAATTGTGAAGTCCTATGGATACTGTTA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56101533 9 + 122678785 I a score=86240.000000 s hg38.chr6_KB021644v2_alt 8857 27 + 185823 TATGAGCATATTAATCTTTTAAATGAT s panTro4.chr6 170622772 27 + 172623881 TATGAGCATATTAATCTTTTAAATGAT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172369466 27 + 174210431 TATGAGCatattaatcttttaaataat i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156238428 27 + 157873769 TATGAGCATATTAATCTTTTAAATAAT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168054368 27 + 169853907 TATGAGCATATTAATCTTTTAAATAAT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169010254 27 - 170955103 TATGAGCATATTAATCTTTTAAATAAT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163822181 27 + 165299245 TATGAGcatattaatcttttaaataat i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96606381 27 + 98384682 TATGAGCATATTAATCTTTTAAATGAT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169812213 27 + 171630274 TATGAGCATATTAATCCTTTAGGTAAT i calJac3.chr4 C 0 I 350 s canFam3.chr1 56101542 23 + 122678785 TATGATCGTATTCACATTGTGGG---- i canFam3.chr1 I 9 C 0 a score=1633658.000000 s hg38.chr6_KB021644v2_alt 8884 532 + 185823 TAATTTATTGATAATCTGATAGATAATTtgcatgatcttatttggatcttctgcttaggcattattatactggtcgtgtaagcaaggaaac--atccagaaaggtggggtaccttccctgagatcacagcgct-agtgctggtggagaaaccggatggaagccaggtcgctctgatcccagctgtagtcatcccccgtgctgctacatactgGTCTGCAGGTGTGTGATTTATTTTATTAGAAGCAGAGAGCCATTCAAGTTATTAAATCTGGTGATCACGCTGACACTTCTGTCTTGAAAGAATAATTCTGGTTAAGAAGTAAAAGATGGACTGATGGGAGAGGACCTAGAGGCAGGGAAACAAGCTGCTGAATTATCACACTAAGAGTCTGAAATGGAGCAGGTGCAGTAGAAATAGAACGG-CACGATGTGTAGAGGACGGAAAGGCAGAAGGAAGCAGAGGGAAGAGACAGAGCTTCTCAGT---GTAATTGGCTGTGTATGTGGTAATA-----ACAGAACAGTAGAAAGAAATAG-ACA s panTro4.chr6 170622799 532 + 172623881 TAATTTATTGATAATCTGATAGATAATTTGCATGATCTTATTGGGATCTTCTGCTtaggcattattatactggtcgtgtaagcaaggaaac--atccagaaaggtggggtaccttccccaagatcacagcgct-agtgctggtggagaaaccggatggaagccaggtctctctgatcccaGCTGTAGTCATCCCCCGTGCTGCTACGTACTGGTCTGCAGGTGTGTGATTTATTTTATTAGAAGCAGAGAGCCATTCAAGTTATCAAATCTGGTGATCACGCTGACACTTCTGTCTTGAAAGAATAATTCTGGTTAAAAAGTAAAAGATGGACTGATGGGAGAGGACCTAGAGGCAGGGAAACAAGCTGCTGAATTATCACACTAAGAGTCTGAAATGGAGCAGGTGCAGTAGAAATAGAATGG-CACGATGTGTAGAGGACGGAAAGGCAGAAGGAAGCAGAGGGAAGAGACAGAGCTTCTCAGT---GTAATTGGCTGTGTATGTGGTAATA-----ACAGAACAGTAGAAAGAAATAG-ACA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172369493 532 + 174210431 taatttattGATAATCTGATAGATAATTtgcatgatcttatttggatcttctgcttaggcattattatactggtcgtgtaagcaaagaaac--attcagaaaagtgtggtaccttccccaagatcacagcgct-agtgctggtggagaaacgggatggaagccaggtctttctgatcccagctgcagtCATCCCCTGTGCTGTTACATACTGGTCTGCAGGTGTGTGATTTATTTTATTAGAAGCAGGGAGCCATTCAAGTTATCAAATCTGATGATCACGCCGACacttttgtcttgcaagaataattctggttaacaagtaaaagatggactgattggagaggacctagaggcagggaaacaagctgctgaattatcacactaaGAGTCTGAAATGGAGCAGGTGCAGTAGAAATAGAATGG-CACGATGTGTAGAGGACGGAAAGGCAGAAGGAAGCAGAGGGAAGAGACAGAGCTTCTCAGT---GTAATTGGCTGTGTATGTGGTGATA-----CTAGAATGGTAGAAAGAAATAG-ACA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156238455 531 + 157873769 TAATTTATTGATGATCTGATAGATAATTTGCATGACCTTATTTGGATCTTCTGCTtaggaattattatactggttgtgtaagcaaggaaac--attcagaaaggtggggtaccttccccgagatcacagcact-agtgctggtggagaaacgggatggaagccaggtctctctgatcccaGCTGTAGTCATCCCCCGTGCTGTTACGTACTGGTCTGCAGGTGTGTGATTTATTTTATTAGAAGCCGGGAGCCATTCAAGTTATCAAATCTGGTGATCACGCTGACACTTCTGTCTTGAAAGAATAATTCTGGTTAACAAG-AAAAGATGGAGTGAAGGGAGAGGACCTAGAGGCAGGGAAACAAGCTGCTGAATTATCACACTAAGAGTCTGAAATGGAGCAGGTGCAGTAGAAATAGAACGG-CATGATGTGTAGAGAACGGAAAGGCAGAAGGAAGCAGAGGGAAGAGACAGAGCTTCTCAGT---GTAATTGGCTGTGTATTTGGTAATA-----ATAGAACAGTAGAAAGAAATAG-ACA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168054395 532 + 169853907 TAATTTACTGATAATCTGATAGATAATTtgcatgatcttatttggatcttctgcttaggcattattatactggtcgtgtaagcaaggaaac--attcagaaaggtggggtatcttccctgagatcacagcgct-agtgctggtggagaaacgggacggaagccaggtctctctgatcccaGCTGTAGTCATCCCCCGTGCTGTTACATAGTGGTCTGCAGGTGTGTAATTTATTTTATTAGAAGCAGGGAGCCTTTCAAGTTATCAAATCTGGTGATCACGCTGACACTTCTGTCTTGAAAGAATAATTCTGGCTAACAAGTAAAAGATGGACTAATGGGAGAGGACCTAGAGGCAGGAAAACAAGCTGCTGAATTATCACACTGAGAGTTTGAAATGGAGCAGGTGCAGTAGAAATAGAACAG-CAAGATGTGTAGAGGACGGAAAGGCAGAAGGAAGCAGAGGGAAGAAACAGAGCTTCTCAGT---GTAATTGGCTGTGTATGTGGTAATa-----atagaacagtagaaagaaatag-aca i rheMac3.chr4 C 0 I 62 s macFas5.chr4 169010281 532 - 170955103 TAATTTACTGATAATCTGATAGATAATTTGCATGATCTTATTTGGATCTTCTGCTTaggcattattatactggtcgtgtaagcaaggaaac--attcagaaaggtggggtatcttccctgagatcacagcgct-agtgctggtggagaaacgggacggaagccaggtctctctgatcccaGCTGTAGTCATCCCCCGTGCTGTTACATAGTGGTCTGCAGGTGTGTAATTTATTTTATTAGAAGCAGGGAGCCTTTCAAGTTATCAAATCTGGTGATCACGCTGACACTTCTGTCTTGAAAGAATAATTCTGGCTAACAAGTAAAAGATGGACTAATGGGAGAGGACCTAGAGGCAGGAAAACAAGCTGCTGAATTATCACACTGAGAGTTTGAAATGGAGCAGGTGCAGTAGAAATAGAACAG-CAAGATGTGTAGAGGACGGAAAGGCAGAAGGAAGCAGAGGGAAGAAACAGAGCTTCTCAGT---GTAATTGGCTGTGTATGTGGTAATA-----ATAGAACAGTAGAAAGAAATAG-ACA i macFas5.chr4 C 0 I 81 s papAnu2.chr4 163822208 532 + 165299245 taattttttgataatCTGATAGATAATTTGCATGatcttatttggattttctgctTAGGCATTATTATACTGGTCATGTAAGCAAGGAAAC--ATTCAGAAAGGTGGGGTATCTTCCCTGAGATCACAGCGCT-AGTGCTGGTGGAGAAACGGGACAGAAGCCAGGTCTCTCTGATCCCAGCTGTAGTCATCCCCCATGCTGTTACATAGTGGTCTGCAggtatgtgatttattttattagaagCAGGGAGCCTTTCAAGTTATCAAATCTGGTGATCACGCTGACACTTCTGTCTTGAAAGAATAATTCTAGTTAACAAGTAAAAGCTGGACTAATGGGAGAGGACCTAGAGGCAGGAAAACAAGCTGCTGAATTATCACACTGAGAGTTTGAAATGGATCAGGTGCAGTAGAAATAGAACGG-CACGGTGTGTAGAGGACAGAAAGGCAGAAGGAAGCAGAGGGAAGAAGCAGAGCTTCTCAGT---GTAATTGGCTGTGTATGTGataata-----atagaacagtagaaagaaatag-aca i papAnu2.chr4 C 0 I 3567 s chlSab2.chr13 96606408 533 + 98384682 TAAATTATTGATAATCTGATAGATAATTTGCATGATCTTATTTGGATTTTCTGCTTaggcgttattatactggtcgtgtaagcaaggaaac--attcagaaaggtggggtaccttccctgagatcacagcgct-agtgctggtggagaaacgggacggaagccaggtctctctgatcccaGCTGTAGTCATCCCGCATGCTGTTACATAGTGGTCTGCAGGTGTGTGATTTATTTTATTAGAAGCAGGGAGCCTTTCAAGTTATCACATCTGGTGATCACCCTGACACTTCTGTCTTGAAAGAATAATTCCGGTTAACAAGTAAAAGATGGACTAATGGGAGAGGACCTAGAGGCAGGAAAACAGGCTGCTGAATTATCACACTGAGAGTTTGAAATGGAGCAGGTGCAGTAGAAATAGAACGG-CATGATGTGTAGAGGACGGAAAGGCAGAAGGAAGCAGAGGGAAGAAACAGAGCTTCTCAGT---GTAATTGGCCGTGTATGTGGTAATA-----ATAGAACAGTAGAAAGAAATAGAACA i chlSab2.chr13 C 0 I 44 s calJac3.chr4 169812590 509 + 171630274 TAATTTATTGATAATCTGATAGATGATTtgcatgatcttatttggaccttctgcttaggcattagtattct-gtcctgtaag-aaggaaac--attcagaaagctggagtgacttctccaatctcccagcgctaagtgc---tggagaaacgggatggaagccaggtttctctgaACCA----GCAGTCATCACCCT--------CAGGCTGGTCTGCAGGTGTGTGA--CATTTTATTAGGAGTAGGGGGCCATTCAAGCTATCAGACCTGgtgattatgctgagacctctgtcttggaagaataattctggctaacaagttaaaaatggactgat-ggagaggacccagaagcagagaaacaagGGGCTGAATTATCACGTGGAGAACTGGAAATGGAGCAGGTGCAGTAGAAACAGAACAG-CAGGATGTGTAGAGGACCGAAGGGCAGAATGAAGCAGAGGGAAGAGCCAGAGCTGCTCAGT---GCAATT----GCGTGTGTGGTAACG-----ATAGAACAGTAGAAAGGAATAC-ACA i calJac3.chr4 I 350 C 0 s canFam3.chr1 56101565 468 + 122678785 TAATTTAGCAATTACCTGCTAGACCCTTGGCATCATTT--TTTGGATCTTCTAC-------TCCTTATACCAGTTGCCTAAAGAATGAAGCAGACTCGGAAAGGGAAGATAACT---CAGGGAGCCTGGTGGG-GGAACCCATGCAGGGAGAGGGTTGATGCCAGGCATGT-GGGTGCAAGTCGCAGT-GTCCCCGG----GCTGGGGGCTGGGCTGCATGTG-GTAAT--------------GCAAGG-------------------------------------ACCTCAGGCTTGGCAGAGTCACTCTGGTTAAAGAGCAAATGATGCTCTGGAGGGAGAGA--TGGGAGGCAGGGGGACGAGCTGCCCTGTTATCAGACTGAGAATCTGAAATAAAACAGCTGTCAGAAAAATAGAGCAGATGGGATTTGTTG---GCAAAGTGGCCAAAGGAGGCAGAGGGAGGAGACAGAGCTTCCTGACCTGATGATGGATCATGTATGTGGAAACAGAGAGACAGGAAAGCAGAGGGAGATGG-AGA i canFam3.chr1 C 0 C 0 a score=212172.000000 s hg38.chr6_KB021644v2_alt 9416 79 + 185823 AAGTGAGGTGAGCTCTAAGCTAGATACACATTCATCATGTTCATACTGGCAATGGTCCGAGCTAC---GGTGCAGA-GGAGTC-- s panTro4.chr6 170623331 79 + 172623881 AAGTGAGGTGAGCTCTAAGCTAGATACACATTCATCATGTTCATACTGGCAATGGTCCGAGCTAC---GGTGCAGA-GGAGAC-- i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172370025 82 + 174210431 AAGGGAGGCAAGCTCTAAGCTAGATACACATTAATCATGTTCATACTGGCAATAGTCTGAGCTACGGTGGTGCAGA-GGAGAC-- i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156238986 79 + 157873769 AAGTGAGGTGAGCTCTAAGCTAGATACACATTAATCATGTTCACACTGGCAATAGTCCGAGCTAC---GGTGCAGA-GGAGAC-- i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168054989 79 + 169853907 aaGTGAGGTGAGCTCTAAATTAGATACACATTAATCATGTTCATACTGGCAGGAGTCTGAGCTAC---GGTGCAGA-CGAGAC-- i rheMac3.chr4 I 62 C 0 s macFas5.chr4 169010894 79 - 170955103 AAGTGAGGTGAGCTCTAAATTAGATACACATTAATCATGTTCATACTGGCAGGAGTCTGAGCTAC---GGTGCAGA-CGAGAC-- i macFas5.chr4 I 81 C 0 s papAnu2.chr4 163826307 79 + 165299245 aagtgaGGTGAGCTCTAAATTAGATACACATTAATCATGATCATACTGGCAGGAGTCCGAGCTAT---GGTGCAGA-CGAGAC-- i papAnu2.chr4 I 3567 C 0 s chlSab2.chr13 96606985 79 + 98384682 AAGTGAGGTGAGCTCTAAATTAGATACACATTAATCATGTTCATACTGGCAGGAGTCCGAGCTAC---GGTGCAGA-CGAGAC-- i chlSab2.chr13 I 44 C 0 s calJac3.chr4 169813099 79 + 171630274 GAGCGAGGAGAGCTCTAAGCTGGATATACATGAACTGTGTTCATACTGGCGACAGCCCAGGCCAC----GTGCGGATGGAGAC-- i calJac3.chr4 C 0 C 0 s canFam3.chr1 56102033 68 + 122678785 CAGTGAGGTGGGCTCTGAGC-GGTGGCACAGTAATCACAA----------GATGGTCCAAG-TGT---GG-GCATA-GAAGGCTT i canFam3.chr1 C 0 I 29 a score=65387.000000 s hg38.chr6_KB021644v2_alt 9495 23 + 185823 ACTGTGCCCGTCCAGTGCACTGC s panTro4.chr6 170623410 23 + 172623881 ACTGTGCCCGTCCAGTGCACTGC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172370107 23 + 174210431 CCTGTGCCCGTCCAGTGCACTGC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156239065 23 + 157873769 ACTGTGCCCGTCCAGTGCACTGT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168055068 23 + 169853907 ACTGTGCCCGTCCAGTGCACTGC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169010973 23 - 170955103 ACTGTGCCCGTCCAGTGCACTGC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163826386 23 + 165299245 ACTGTGCCCGTCCAGTGCACTGC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96607064 23 + 98384682 ACTGTGCCCGTCCAGTGCACTGC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169813178 23 + 171630274 CCTGCACCGGAACGGTGCGCTTC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56102101 29 + 122678785 I a score=240243.000000 s hg38.chr6_KB021644v2_alt 9518 86 + 185823 ACCATTATTTACGGGTAAA----------------TAGAAAAGTCTTAGTTTATTTAATGTTTA-AATATTTCCTTTTGTTCATTGGATTATTTGACATTATT s panTro4.chr6 170623433 86 + 172623881 ACCATTATTTACGGGTAAA----------------TAGAAAAGTCTTAGTTTATTTAATGTTTA-AATATTTCCTTTTGTTCATTGGATTATTTGACATTATT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172370130 76 + 174210431 ACCATTATT--------------------------TGGAAAAGTCTTAGTTTATTTAATGTTTA-AATATTTCCTTTTGTTCATTGGATTATTTGACATTATT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156239088 86 + 157873769 ACCATTATTTACAGGTAAA----------------TAGGAAAGTCTTAGTTTATTTAATATTTA-AATATTTCCTTTTGTTCATTGGATTATTTGACATTATT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168055091 86 + 169853907 ACCGTTATTTACAGGTAAC----------------TAGAAAAGTCTTAGTTTATTTAATGTTTA-AATATTTCCTTTTGTTCATTGGATTATTTGACATTATT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169010996 86 - 170955103 ACCGTTATTTACAGGTAAC----------------TAGAAAAGTCTTAGTTTATTTAATGTTTA-AATATTTCCTTTTGTTCATTGGATTATTTGACATTATT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163826409 86 + 165299245 ACCATTATTTACAGGTAAC----------------TAGAAAAGTCTTAGTTTATTTAATGTTTA-AGTATTTCCTTTTGTTCATTGGATTATTTGACATTATT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96607087 86 + 98384682 ACCGTTATTTACAGGTAAC----------------TAGAAAAGTCTTAGTTTATTTAATGTTTA-AATATTTCCTTTTGTTCATTGGATTATTTGACATTATT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169813201 76 + 171630274 ACCACTATTTACAGGTAAA----------------TCTAAGAGTCTTAGTGT-TTTAGTGTTTA-GATATTTCCGTTTGTTCA---------TTGACATTATT i calJac3.chr4 C 0 C 0 s canFam3.chr1 56102130 102 + 122678785 ACCAAGTCTTACTGGTAGATTTTGAGTATCATCCTTAGGGTAGAGTCAGTGAAAACATTTCTTATAATACCCCCTTCTCATCATGGGA-TATTTGAAGATATT i canFam3.chr1 I 29 I 197 a score=68652.000000 s hg38.chr6_KB021644v2_alt 9604 22 + 185823 CTTTTTGACATCTTGATGTGTT s panTro4.chr6 170623519 22 + 172623881 CTTTTTGACATCTTGATGTGTT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172370206 22 + 174210431 CTTTTTGACATCTTGATGTGTT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156239174 22 + 157873769 CTTTTTGACATCTTGATGTGTT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168055177 22 + 169853907 CTTTTTGACATCTTGATGTGTT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169011082 22 - 170955103 CTTTTTGACATCTTGATGTGTT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163826495 22 + 165299245 CTTTTTGACATCTTGATGTGTT i papAnu2.chr4 C 0 I 534 s chlSab2.chr13 96607173 22 + 98384682 CTTTTTGATATCTTGATGTGTT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169813277 22 + 171630274 CCTTCTGACATCTTGATGTTTC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56102232 197 + 122678785 I a score=453703.000000 s hg38.chr6_KB021644v2_alt 9626 153 + 185823 AGTAACTTTACATTATATATTAGGGTCATTTGCAATAGCTTAATGGAGAATCAAGTGTTTCTCACATTTTTGGaaccttattaagat--------ataccacaaaatgcaccatttgaggtggtcag-ttcagggatattttagttcattcacagacttaca s panTro4.chr6 170623541 153 + 172623881 AGTAACTTTACATTATATATTAGGGTCATTTGCAATAGCTTAATGGAGAATCAAGTGTTTCTCACATTTTTGGaaccttattaagat--------ataccacaaaatgcaccatttgaggtggtcag-ttcagggatattttagttcattcacagacttaca i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172370228 153 + 174210431 AGTAACTTTACATTATATATTAGGGTCATTTGCAATAGCTTAATGGAGAATCAAGTGTTTCTCACATTTTTGGAACCTTATTAAGAT--------ATACTATAAAATGCACCATTTCAGGTGGTCAG-TTCAGGGATATTTTAGTTCATTAACAGACTTACA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156239196 153 + 157873769 AGTAACTTTACATTATATATTAGGGTCATTTGCAATAGCTTAATGGAGAATCGAGTGTTTCTCACATTTTTGGaaccttattaagat--------ataccataaaatgcaccatttcagatggtcag-ttcagggatattttagttcattcacagacttaca i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168055199 154 + 169853907 AGTAACCTGACATTGTATATTAGGATCATTTGCAATAGCTTAATGGAGAATCAAGTGTTTCTCACATTTTTGGaactttgttaagat--------ataccataaagtgcaccatttcaggtggtcagtttcagggatgttttagttcattcacagatttaca i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169011104 154 - 170955103 AGTAACCTGACATTGTATATTAGGATCATTTGCAATAGCTTAATGGAGAATCAAGTGTTTCTCACATTTTTGGaactttgttaagat--------ataccataaagtgcaccatttcaggtggtcagtttcagggatgttttagttcattcacagatttaca i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163827051 154 + 165299245 aGTAACCTGACATTGTATATTAGGATCATTTGCAATAGCTTAATGGAGAATCAAGTGTTTCTCACATTTTTGGAACCTCGTTAAGAT--------ATACCATAAAATGCACCATTTCAGGTGGTCAGTTTCAGGGATGTTTTAGTTCGTTCACAGACTTACA i papAnu2.chr4 I 534 C 0 s chlSab2.chr13 96607195 154 + 98384682 AGTAACTTGACATTATATATTAGGGTCATTTGCAATAGCTTAATGGAGAATCAAGTGTTTCTCACATTTTTGGAACCTTGTTAAGat--------ataccataaaatgcaccatttcaggtggtcagtttcagggatgttttagttcattcacagacttaca i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169813299 161 + 171630274 AGTAACTTTACATTATATATTAGGGCCATTTGCAATAGCTTAATGGAGAATCAAGTGTTTCTCACAtttttcaaagcttattaagatacatttacacaccataaaactcaccatttcaagtgctcag-ttcaggggtgttctagttcattcacaggcgtata i calJac3.chr4 C 0 C 0 e canFam3.chr1 56102232 197 + 122678785 I a score=4500.000000 s hg38.chr6_KB021644v2_alt 9779 1 + 185823 c s panTro4.chr6 170623694 1 + 172623881 c i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172370381 1 + 174210431 C i ponAbe2.chr6 C 0 M 662 s nomLeu3.chr3 156239349 1 + 157873769 c i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168055353 1 + 169853907 c i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169011258 1 - 170955103 c i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163827205 1 + 165299245 C i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96607349 1 + 98384682 c i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169813460 1 + 171630274 c i calJac3.chr4 C 0 C 0 s canFam3.chr1 56102429 1 + 122678785 C i canFam3.chr1 I 197 C 0 a score=329778.000000 s hg38.chr6_KB021644v2_alt 9780 157 + 185823 tttcagcaccccagta-------agaagcctcacacccattag----------ggtcc-----acca--tggctgctctccccaccgacttcaggcctggcagcca--atgatctgctccatgtctctctggattcgtcttctctgagcattccacacacatagccctgcagtgtgagac-ttt--------- s panTro4.chr6 170623695 157 + 172623881 tttcagcaccccagta-------agaagcctcacacccattag----------ggtcc-----acca--tggctgcactccccaccgacttcaggcctggcagcca--atgatctgctccatgtctctctggattcgtcttctctgagcattccacacacatagccctgcagtgtgagac-ttt--------- i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156239350 157 + 157873769 tttccgcaccccagta-------agaagcctcacacccattag----------ggtcc-----gcca--tggctgctccctccacccactccaggcctggcagcca--atgatctgttccatgtctctctggattcatcttctctgagcattccacacacacagccctgcagtgtgagac-ttt--------- i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168055354 155 + 169853907 tttcagcaccccagta-------agaagcctcacgccccttag----------ggtct-----gcca--tggctgctctccccacccaccccaggcccagcagcca--atgatctgttccatgtctctctggattcgtcttctctgagcattccacacac--agccctgcagcgtgagac-att--------- i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169011259 155 - 170955103 tttcagcaccccagta-------agaagcctcacgccccttag----------ggtct-----gcca--tggctgctctccccacccaccccaggcccagcagcca--atgatctgttccatgtctctctggattcgtcttctctgagcattccacacac--agccctgcagcgtgagac-ttt--------- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163827206 155 + 165299245 TTTCAGCCCCCCAGTA-------AGAAGCCTCACGCCCATTAG----------GGTCT-----GCCA--TGGCtgctctccccacccaccccaggccCAGCAGCCA--ATGATCTGTTCCATGTCTCTCTGGATTCGTCTTCTCTGAGCATTCCACACAC--AGCCCCGCAGCGtgagac-ttt--------- i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96607350 156 + 98384682 tttcagcaccccagta-------agaagcctcacgcccattag----------ggtct-----gcca--tggctgctctccccacccaccccaggcccagcagcca--atgatctgttccctgtctctctggcttcgtcttctctgagcgttccacactc--agccatgcagtgtgagactttt--------- i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169813461 152 + 171630274 tttcagtgccccagta-------agaagccccatacccgttag----------ggtcc------cca--tggctgctcccctcacccactgcaggcctggcagcca--gcgatctgttccacgtgtgtctggattcgtcctctcctggcatttcatCCTC----TCCTGCAGTGTGAGAA-TTT--------- i calJac3.chr4 C 0 C 0 s canFam3.chr1 56102430 177 + 122678785 CTTCAGCACCTCCGCATGTTAGTAGGACCATGTTGCCCATCGGTCACGGGAATGGTCTAAGGAGCCAACAGAGTGTTTTCCTCACATACTTCacaat-----gtcattatgatatatttcacattccaagaaattcacccatttcaaggatc----------agttcagtgggtttagat-catccatgggtt i canFam3.chr1 C 0 C 0 e ponAbe2.chr6 172370382 662 + 174210431 M a score=88811.000000 s hg38.chr6_KB021644v2_alt 9937 68 + 185823 ttt-at------tttttaattttttgagacagaatctcactcttgtcacccaggctggaatgcaatggatgcaat s panTro4.chr6 170623852 68 + 172623881 ttt-at------tttttaattttttgagacagaatctcactcttgtcacccaggctggaatgcaatggatgcaat i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156239507 67 + 157873769 tttaat------tttttaattttttgagac--aatttcactctcgtcacccaggctggaatgcaatggatgcaat i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168055509 61 + 169853907 ttt--------------tattttttgagacagaatctcactcttgtcacccaggttggaatgtagtggttgcaat i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169011414 61 - 170955103 ttt--------------tattttttgagacagaatctcactcttgtcacccaggttggaatgtagtggttgcaat i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163827361 61 + 165299245 ttt--------------tattttttgagacagaatctcactcttgtcacccaggttggaatgtagtGGTTGCaat i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96607506 61 + 98384682 ttt--------------tttttttttagacagaatctcactcttctcacccaggttggaatgtagtggttgcaat i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56102607 68 + 122678785 -----tagatcatccacaggtttgtgaagc--cccctcaaccctagcccccaacttgagatgccatgcatgtggt i canFam3.chr1 C 0 I 196 e calJac3.chr4 169813613 0 + 171630274 C e ponAbe2.chr6 172370382 662 + 174210431 M a score=167457.000000 s hg38.chr6_KB021644v2_alt 10005 96 + 185823 ggtgcaat-----ctcggttcaccgcaacctccgcctcacgggttcaagtgattcttctgcctcagcctcccgagtagctgggactacaggagcccaccac s panTro4.chr6 170623920 96 + 172623881 ggtgcaat-----ctcggttcaccgcaacctccgcctcacgggttcaagtgattcttctgcctcagcctcccgagtagctgggactacaggagcccaccac i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156239574 96 + 157873769 ggtgcaat-----ctcggctcactgcaacctccacctccctggttcaagcgattcttctgcctcagcctcccgagtagctgggactacaggagcccgccac i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168055570 101 + 169853907 tgtgcaatctcagctcagctcactgcaacctccacctcccaggttcaagtgattcttctgcctcagcttcccaagtagctgggactacaggcgcccgccac i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169011475 101 - 170955103 tgtgcaatctcagctcagctcactgcaacctccacctcccaggttcaagtgattcttctgcctcagcttcccgagtagctgggactacaggcgcccgccac i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163827422 96 + 165299245 tgtgcaat-----ctcagctcactgcaacctccacctcccaggttcaagcgattcttctgcctcagcttcccgagtagctgggactacaggtgcccgccac i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96607567 96 + 98384682 cgtgcaat-----ctcagctcactgcaacctccgcctcccaggttcaagcgattcttctgcctcagcttcccgagtagctgggactacaggtgcctgccac i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169813613 0 + 171630274 C e canFam3.chr1 56102675 196 + 122678785 I e ponAbe2.chr6 172370382 662 + 174210431 M a score=125594.000000 s hg38.chr6_KB021644v2_alt 10101 56 + 185823 cacgcctagctaatttttttgtatttttagtagagacggggtttcaccgtgttagc s panTro4.chr6 170624016 56 + 172623881 catgcctggctgatttttttgtatttttagtagagacggggtttcaccgtgttagc i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172371044 55 + 174210431 cacgcctggctaa-ttttttgtatttttagtagagatggagtttcaccgtgttaac i ponAbe2.chr6 M 662 C 0 s nomLeu3.chr3 156239670 55 + 157873769 cacgcctggctaa-ttttttgtatttttagtacagacggggtttcaccgtgttagc i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168055671 56 + 169853907 cccgcctggataattttttggtatttttagtagagacggggtttcaccgtgttagc i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169011576 56 - 170955103 cacgcctggataattttttggtatttttagtagagacggggtttcaccgtgttagc i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163827518 56 + 165299245 ctcgcctggctaattttttggtatttttagtagagacggggtttcaccgtgttagc i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96607663 56 + 98384682 cacgcctggctaattttttagtatttttagtagagacggggtttcaccatgttagc i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169813613 0 + 171630274 C e canFam3.chr1 56102675 196 + 122678785 I a score=144333.000000 s hg38.chr6_KB021644v2_alt 10157 62 + 185823 cagggtggtctcgatctcctgacctcgtgatcca---------ccagcctcggcctcccaaagtgctggga s panTro4.chr6 170624072 62 + 172623881 cagggtggtctcgatctcctgaccttgtgatcca---------ccagcctcggcctcccaaagtgcgggga i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172371099 62 + 174210431 cggggtggtctcgatctcctgacctcgtgatcct---------cccacctcggcctcccaaagtgctggga i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156239725 62 + 157873769 cagggtggtctcgatctcctgacctcatgatcca---------cccacctcggcctcccaaagtgctgggt i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168055727 62 + 169853907 tggggtggtctcgatctcctgacctcacgatctg---------cccaccttggcctcccaatgtgctggga i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169011632 62 - 170955103 tggggtggtctcgatctcctgacctcacgatctg---------cccaccttggcctcccaatgtgctggga i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163827574 62 + 165299245 tggggtggtctcgatctcctgacctcacgatctg---------cccgcctcggcctcccaacgtgctggga i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96607719 62 + 98384682 tggggtggtctcgatctcctgacctcactatgtg---------cccacctcggcctcccaacgtgctggga i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56102871 55 + 122678785 caggg------------catgatctcaggatctgggatcgagtcccacatcgggctccc----tgcaggga i canFam3.chr1 I 196 I 133 e calJac3.chr4 169813613 0 + 171630274 C a score=79380.000000 s hg38.chr6_KB021644v2_alt 10219 36 + 185823 --tcacaggcgtgagccaccgcccccggctgagacttc s panTro4.chr6 170624134 36 + 172623881 --tcacaggcgtgagccaccgcccccggctgagacttc i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172371161 36 + 174210431 --tcacaggcatgagccaccgcccccggctGAgacttt i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156239787 36 + 157873769 --tcacaggcgtgagccaccacccctggctgagacttt i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168055789 38 + 169853907 ttttacaggcatgagctaccgcacccgaccaagacttt i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169011694 38 - 170955103 ttttacaggcatgagctaccgcacccgaccaagacttt i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163827636 38 + 165299245 ttttacaggcgtgagccaccgcgcccggccgagacttt i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96607781 38 + 98384682 ttttacaggcgtgagccaccgcgcccgaccgagacttt i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169813613 0 + 171630274 C e canFam3.chr1 56102926 133 + 122678785 I a score=146052.000000 s hg38.chr6_KB021644v2_alt 10255 57 + 185823 tgtgactcagcatcatctttcgagtgtcatccccacagccgcatacagcagaacctg s panTro4.chr6 170624170 57 + 172623881 tgtgactcagcatcatctttccagtgtcatccccacagctgcgtacagcagaatgtg i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172371197 57 + 174210431 tgtgactcagcatcatctttcgagtctcgtccccacagccgcatacagtagaacctt i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156239823 57 + 157873769 tgtgactcagcatcatctttcgagtctcatccccacagccgcatacagcagagcctt i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168055827 57 + 169853907 tgtgactcaacatcatctttcgagtctcgtccccacagtcgcatacagcagagcctt i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169011732 57 - 170955103 tgtgactcaacatcatctttcgagtctcatccccacagtcgcatacagcagagcctt i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163827674 57 + 165299245 TGTGACTCAACATTATCTTTCAAGTCTCGTCCCCACAGCCGCATACAGCAGAGCCTT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96607819 57 + 98384682 tgtgactcaatctcatcttttgagtctcgtccccacagccgcatacagcagagcctt i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169813613 51 + 171630274 TGTGACTCGGCTTAACCTTCTGAGTCTCGTTCCTTCAGAGGCATACAGCAG------ i calJac3.chr4 C 0 C 0 e canFam3.chr1 56102926 133 + 122678785 I a score=2864724.000000 s hg38.chr6_KB021644v2_alt 10312 996 + 185823 ctattttatcggtggataacattctgtggtagggatataccatgt--ttttttacctatttaccagctgatgcacgttgggcccttttgccagtcaggcctgtcatgagtaa-tggtgctaggaaccttcatgcacaagg-----ttttttcagaacatatgcacccagttctctcggatacacaagcaggtgtgaaagtgctc--------atcaactttgtgttcggccgtttgaggaactgctcaactgttttcccacaaggctgtaacattttacatttccccaaatgaagtg--caaggttccaaattctccacctcctcgccagc-tcctactattgtctgactttttaattttgtccatcctggcgagtgtgaaagggtatttcactgcagtttcggtttgtatttccccagga--cagtgacatagcacatcttccaatgtgcttattgagcatttgcatattttctttggagaaacgttcattcaaatcatttgcccatttttgagattag-gatttt-tttta---attgag-tttaaattgagttatctttatgtgttctagatacaagtatcttactggtgtgatttgcaaatattttgtcccattctgtggatagatactgtctttttacttttttgatggtgtcccttgaagcacaaagtttct----aaattttagtaaaatccaaattatctattta-----------ttgtca--ctgtgcttcag-tgctgtacctaagaaaccattatctaactccagattatgaaggtttacccatgtgttttctcctgtgagtttttccagcttcagtgcttacatttaggtctattatccattcttggctactttttgatgcatgatgaggtagggatatcccttcattctttcacat-tagtagtcgaattttcccagcactatttgttagaaaagacaattctttgctcattgaa--ttttcttggcccccttgttgaaaatc-----gtcataaatacgaggatttatttctggactgtcaagtatattctatt s panTro4.chr6 170624227 995 + 172623881 ctattttatcggtggataacattctgtggtagggatataccatgt--ttttt-acctatttaccagttgatgcacgttgggcccttttgccattcaggcctgtcatgagtaa-ttgtgctaggaaccttcatgcacaagg-----ttttttgagaacatatgcacccagttctctcggatacacacgcaggtgtgaaagtgctc--------atcaactttgtgttcggccatttgaggaactgctcaactgttttcccacaaggctgtaacattttacatttccccaaatgaagtg--caaggttccaaatccttcgcctcctcgctagc-tcctactattgtctgactttttaattttgtccatcctggcgagtgtgaaagggtatttcattgcagtttcggtttgtatttccccagga--cagtgtcatagcacatcttccaatgtgcttattgagcatttgcatattttctttggagaaacgttcattcaaatcatttgcccatttttgagattag-gatttt-tttta---attgaa-tttaaattgagttatctttatgtgttctagatacaagtatcttactggtgtgatttgcaaatattttgtcccattctgtggatagatactgtctttttacttttttgatggtgtcccttgaagcacaaagtttct----aaattttagtaaaatccaaattatctattta-----------ttgtca--ctgtgcttcag-tgctgtacctaagaaaccattatctaactccagattatgaaggtttacccatgtgttttctcctgtgagtttttccagcttcagtgcttacatttaggtctattatccattcttggctactttttgatgcgtgatgaggtagggatatcccttcattctttcacat-tagtagtcgaattttcccagcactatttgttagaaaagacaattctttgctcattgaa--ttttcttggcccccttgttgaaaatc-----gtcataaatacgaggatttatttctggactgtcaagtatattctatt i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172371254 993 + 174210431 ctattttatcggtggataacattctgtggtagggatataccatgc--ttttt-acccatttatcagttgatggactttggccccttttgccagtcatgcctgtcatgagtaa-tgatgctatgaaccttcatgcacaagg-----ttttttcagaacgtatgcacccagttctcttggatacacatgcaggcgtgaacgtgctc--------gtcaactttgtgttcggccgtttgaggaactgctcaactgttttcccacagggctgtaacattttacacttctccaaatgaagtg--caagattccaaattctctgcctcctcactagc-acctactattgtctgactttttaatttggtccatcctggcatgtgtgaaatggtatttcgttgtggtttcagtttgtgtttccccagga--cagtgacacagcacatcttccaatgtgcttattgagcatttgcatattttctttggagaaacgttcgttcaaatcatttgcccatttttgagattag-gatttt-tttta---attgag-tttaaattgagttatctttatgtgttctagatacaagtatcttactggtgtgatttgcaaatattttgtcccattctgtggatagatactgtctttttacttttttgatggtgtcccttgaatcacaaagtttct----aaattttaataaaatccaaattgtctattta-----------ttgtca--ctgtgcttgag-tgctgtatctaagaaaccattacctaactccagattatgaaggtttactcatgtgttttctcctgtgag-ttttccagcttcagtgcttacatttaggtctatgatccattcttcgctactttttgatgcatgatgaggtagggatatcccttcattctttccaat-tggtagtcaaattgtcccagcacaatttgttagaaaagactattctttactgattgaa--ttttcttggccccc-ggttgaaaatc-----atcataaatatgaggatttatttctggactgtcaagtatattccatt i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156239880 994 + 157873769 ctatttcatcggtggataacattctgtggtagggatataccacat--ttttt-acccatttctcagctgatggacgttgggcccttttgccagtcatgactgtcatgagtaa-tggtgctacaaaccttcatgcacaagg-----ttttttcagaatgtatgcacccagttctctcggatacacacgcagatatgaatgtgctc--------gtcaactttgtgttcggccatttgaggaactcctcaactgttttcccacaaggctttaacattttacatttccccaaatgaagtg--caaggttccaaattctccgcctcctcaccagcgccctactattgtctgactttcaaattttgtccatcctggcgtgtgtgaaagggtatttcattgcggttgcagtttgtatttccccagga--cagtgatacagcacatcttccaatgtgcttactgagcatttgcatattttctttggagaaacgttcattcaaatcatttgcccatttttgagattag-gatttt-tttta---attgag-tttaaattgagttatctttatgtgttctagatacaagtatcttactggtgtgatttgcaaatattttgtcccattctgtggatagacactgtctttttacttttttgatggtgtcccttgaagtacaaagtttct----aaattttaat-aaatcaaaattatctattta-----------ctgtca--ctgggcttcag-tgctgtgtctaagaaaccattgcctaactccagattatgaaggtttactcatctgttttctcctgtgag-ttttccagcttccgtgcttacatttaggtctatgatccattcttggctactttttgatgcatgatgaggtagggatatcccttcattctttcacat-tggtagtcgaattgtcccagcacaatctgttagaaaagactgttctttgctcattgaa--ttttattggcccccttgttgaaaatc-----gtcataaatatgaggatttatttctggactgtcaagtatattccact i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168055884 983 + 169853907 ctattttattggtggataacattctatggtaaggatataccatgt--ttttt-acccatttatcaactgatggacattgggccattt---------tgcctgttatgagtaa-tggtgctacgaacctccgtgcacaaga------tttttcagaacgtgtgcactcagttctctcagatacacacgcaggcgtgaaagtgcta--------gtcaactttgtgttcggccgttggaggagctgctcaactgttttcccacaaggctgtaacattttacattcatccaaatgaagtg--caagtttccaaattctccgcctcctcaccggt-gcctgctgttgtctgactttttaatattgtccgtcctggcatgtgtaaaagggtatttcattgta-tttcggtttgtatttgcccagga--cagtgacacagcacatcttccaatgtgcttattaagcatttgcgtattttctttggagaaatgttcattcaaatcatttgcttatttttgagattca-ttttttctttta---attgag-tttaaattgagttatctttatgtgttctagataaaagtattttactggtgtgatttgcaaatattttgtcccattctgtggatagatactgtctgtttacttttttgatggtgtcccttgaagcacaaagtttct----gaattttaataaaatccaaatgatctattta-----------ttgtca--ctgtgcttcag-tgctgtatctgagaaaccattgtctaactccagattatgaaggtttactcatgtgttttctcctgtgag-ttttccagcttcagcgcttacgtttaggtctatgatccactcttggttactttttggtgcatgatgaggtagggataccccttcattcttctgcac-tgggagtcgggttgtcccagcacactttgtgagaaaagacgattcctcgctcattgaa--ttgtattggcccct-tgttgaaaatc-----atcacacatatgaggatttatttctggactgtcaagaatattccatt i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169011789 983 - 170955103 ctattttattggtggataacattctatggtaaggatataccatgt--ttttt-acccatttatcaactgatggacattgggccattt---------tgcctgttatgagtaa-tggtgctacgaacctccgtgcacaaga------tttttcagaacgtgtgcactcagttctctcagatacacacgcaggcgtgaaagtgcta--------gtcaactttgtgttcggccgttggaggagctgctcaactgttttcccacaaggctgtaacattttacattcatccaaatgaagtg--caagtttccaaattctccgcctcctcaccggt-gcctgctgttgtctgactttttaatattgtccgtcctggcatgtgtaaaagggtatttcattgta-tttcggtttgtatttgcccagga--cagtgacacagcacatcttccaatgtgcttattaagcatttgtgtattttctttggagaaatgttcattcaaatcatttgcctatttttgagattcg-ttttttctttta---attgag-tttaaattgagttatctttatgtgttctagataaaagtattttactggtgtgatttgcaaatattttgtcccattctgtggatagatactgtctgtttacttttttgatggtgtcccttgaagcacaaagtttct----gaattttactaaaatccaaatgatctattta-----------ttgtca--ctgtgcttcag-tgccgtatctgagaaaccattgtctaactccagattatgaaggtttactcatgtgttttctcctgtgag-ttttccagcttcagcgcttacgtttaggtctatgatccactcttggttactttttggtgcatgatgaggtagggataccccttcattcttctgcac-tgggagtcgggttgtcccagcacactttgtgagaaaagacgattcctcgctcattgaa--ttgtattggcccct-tgttgaaaatc-----atcacacatatgaggatttatttctggactgtcaagaatattccatt i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163827731 993 + 165299245 CTATTTTATTGGTGGATAACATTCTATGGTAAGGATATACCATGT--TTTTT-ACCCATTTATCAACGGATGGACATTGGGCCGTTTTGCCTGTCATGCCTGTCATGAGTAA-TGGTGCTACGAACCTCCATGCACAAGA------TTTTTCAGAACGTGTGCACTCAGTTCTCTCGGATACACATGCAGGCGTGAAAGTGCTA--------GTCAACTTTGTGTTCGGCCGTTTCAGGAGCTGCTCAACTGTTTTCCCACAAggctgtaacattttacattcatcCAAATGAAGTG--CAAGTTTCCAAATTCTCCGCCTCCTCACCGGT-GCCTGCTGTtgtctgattttttaatattgtcCATCCTGGCATGTGTAAAAGggtatttcattgta-tttcaATTTGTATTTCCCCAGGA--CAGTGACACAGCACATCTTCCAATGTGCTTATTGagcatttgcatattttctttggagaaatgttcatttaaatcatttgcccatttttgagattagtttttttctttta---attggg-tTTAAATTGAGTTATCTTTATGTGTTCTAGATAAAAGTATTTTACTggtgtgatttgcaaatattttgtcccattctgtggATAGATACtgtctgtttacttttttgatgGTGCCCCTTGAAGCACAAAGtttct----gaattttaataaaatccaaatgaTCTATTTA-----------TTGTCA--CTGTGCTTCAG-TGCTGTATCTGAGAAACCATTGTCTAATTCCAGATTATGAAGGTTTACTCATGTGTTTTCTCCTGTGAG-TTTTCCAGTTTCAGCGCTTAcgtttaggtctatgatccattctTGGTTACTTTTTGATGCATGATGAGGTAAGGATACCCCTTCATTCTTCTGCAC-TGGGAGTCGGGTTGTCCCAGCACACTTTGTTAGAAAAGACGATTCCTCGCTCATTGAA--TTGTATTGgcccct-tgttgaaaatc-----atcaCAAAtatgaggatttatttctggactgtcAAGAATATTCCATT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96607876 986 + 98384682 ctattttattggtggataacattctatggtaaggatataccatgt--ttctt-acccatttatcgactgatggacagtgggccgttttgcctatcatgcctgtcatgagtca-tggtgctacgaacctccgtgcacaaga------tttttcagaacgtgtacactcagttctctcggatacacacgcaggcgtgaaagtgcta--------gtcaactttgtgttcggccgtttgaggagctgctcaactgttttcccacaaggctgtaacatttaacattcatccaaatgaagtg--caagtttccaaattctccgcctcctcaccggt-gcctgctgttgtctgactttttaatattgtccatcctggcatgtgtgaaagggtatttcattgca-ttttggtttgtatttccccagga--cagtgacacagctcatcttccaatgtgcttattgagcatttgcatattttctttggagaaatgttcattcaaatcatttgcctatttttgagattcg-ttttttctttta---attgag-tttaaattgagttatctttatgtgttctagataaaagtattttactggtgtgatttgcaaatattttgtcccattctgtggatagatactgtctgtttacttttttgatgatgtcccttgaaccacaaagtttct----gaattgtaataaaatccaaatgatctattta-----------ttgtca--ctgtgcttcag-tgctgtatctgagaaaccattgtctaactccagattatgaaggtttactcatgtgttttctcctgtgag-ttttccagcttcagcacttacgtttaggtctatgatccactcttggttactttttgatgcatggtgaggtaggga------ttcattcttctgcac-tgggagtcgggttgtcccagcgcactttgttagaaaagactattccttgctcattgaa--ttgtattggcccct-tgttgaaaatc-----atcacacatatgaggatttatttctggactgtcaagaatattccatt i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169813664 957 + 171630274 -----------------AACACTGTGTGgtagggatacaccacgt--ttttt-acctgtgtatcagttgatggacgtttggtccctt---------tgcctgtcatgagtag-tggtgctacaca-cttcatgcacaagtgaagtgtttttcagcatgtgtgcatgcagttctctcagatacacgctcgggcatgaaagcgcta--------gtcaacttcgtgttcagcagtttgaggaaccgctcaactgttttcccacgaggcagtaacatttcacactca-ccaaatgaagtg--caaggttccaaattcccc-cctcctcaccagt-gcttgctgttgtctgactttttagttctgtccgttctggtgtgtgtgaaa--gtctttcactgcagttgtggtttgtatttccctgggg--cagtgacacagcacaacttcgcacgtgcttgtt----atttgtgtattttctttggagaaatgttcattcaaatcatttgcccatttttgggattag-gtttct-tttaa---gttcagttttaaactgagtta--attgagtgtgatagatacaacaatcttattggtgtgatttgcaaatattttgttccattctgtgaatagaaattgt-tttttactttttcgatggtgtcccttgaagcacaaagtctct----aaattttaatgaaatctaagttatctattt-------------tgtta--ctgagcttcag-tgctgtatctaggaaaccactgtctaactccagatgatgaaggtttgctcacgtgttttctcctgcggg-tttttccacatcagcacttccatttgggcctatgatccattcctgatgacctttttgtgcatgacgaggtagggatacccctttgttctttggcct-tcgtggtccagttgtcccagcacaatttgtcagaaaagactgttctttgcccattgaa--ttgtagtggcccct-tgttgaaaccc------tcatacctaagaggatttagttct-gactgtcaagtgcattccact i calJac3.chr4 C 0 C 0 s canFam3.chr1 56103059 952 + 122678785 ttttttgattgatcagtaatgctccattatatggatataccacatactatct-atccattgatccactgatggac-----------------------------ataagtagtttgcactttgaac-------------a------ctgttcaa---gttcgggttctgtgctcttggacatacacttcagagtggacttgctaaatcatatggaaactttatgtctagaactttgaggaaccacctcactgtttccccaagtggctttgacactt-gcattc--ccattggcagtggataagcttccaaatttccagtgtcctcattcac-acttgttactg--tgctgttttcatttgagctgcctcagtgcatgcaaaaggagagcttg-tgtggcttcgatttgtatttcctgaacatttaatgctgtagcacctctt---gcgtgcttattagtaactcatatattttctttggagaaatgtctattcagataatttgcccattttctgaagtaa-aattgtatctcacgtattaag-ttgtaagagattt---tagacgtctttcggatacaagtatctttccagtatgatttgcaaatattttg-cctattgtgtggactgggattctctttgcactttctccatagtgtgtcttgaaagaggaggctttttaaaaaattctggtaacatccaatttatctatatatatttttttcttttccagtttctgcttctgatgccgcatctcatcaaccagtgcagagctcaaggtcatgaagatttacccaaatgtattattctgtggg-t---------------------tccgggtctctgacctaa----gtagagtgttatgtagattgtacagaagggtt--cccttcattcatctgcacaaggtgacctagttgtcccagctgcatttgtta-aaaggactatcctttgtccattgaaattttttttgacatcactgttgaaaatcaatttatcataaatgtgaggacttatttctggcctctcaattgtattccact i canFam3.chr1 I 133 I 5641 a score=3023276.000000 s hg38.chr6_KB021644v2_alt 11308 1026 + 185823 catgtttttctgcgggtgtctgagtgtctgttatttttccttcattcttttcttctttctgctc----------ctaaaatgagatactacgtgttgacttaaatgcaagttctccagttttttcttctactgactcagatctgttgttaagaccctctagggatgttttatttcacctatcacagttttcaactcactccagaacttctatttgattcttttaaaacagtttctatttattaatgttctctttttggaaatatatcattgtaatcttttaaaaattctttagacagagtttcttttggtgctcgtacatatttataataactgctgtaaagcctgtgcctatttagtctaaaatctgggtgcatttagaaacattttctgttggctgctttttatcctctgtgtgtggcata--ctcctgtttatttacatatcttgtaaa-ttttattgaaaactgaacatttcagataataatatattgaggcgattctagtatcagatttctctacacacacc-------caaatgtttcttgctgttgcagagttttgctgtgttgttagatttgttttcatttcctttgtggctagttgtctgtttagtgacttggcctgactacttttgcagagctctaa-cccctgccacgggtgtctaacctttgggcttccctgagccacacataaaatacacgaatactagccatagctgatgagctt-aaaaaaaatggtttgtgcatgattttcatgatatccaccaccgcaaataagcaaacaagtccttatattcaaagggttggacatccgtgcctacagcatgtggacactgagctcccagccttttgttaaagcttttcatttcatttttaagcttggctttctaagatttatatctaggccagtgtaatttagtgatcaatcaacgatgggtcagttttctggcatg-------acttccatgtacatttgggccatctctgcgagaaggctttgccttccattgtcaggcagtttatgagacagcctttgcttttaccttctgct s panTro4.chr6 170625222 1026 + 172623881 catgtttttctgcgggtgtctgagtatctgttatttttccttcattcttttcttctttctgctc----------ctaaaatgagatactatgtgttgacttaaatgcaagttctccagttttttcttctactgactcagatctgttgttaagaccctctagggatgttttatttcacctatcacagttttcaactcactccagaacttctatttgattcttttaaaacagtttctatttattaatgttctctttttggaaatatatcattgtaatcttttaaaaattctttagacagagtttcttttggtgctcgtacatatttataataactgctgtaaagcctgtgcctatttagtctaaaatctgggtgcatttaggaacattttctgttggctgctttttatcctctgtgtgtggcata--ctcctgtttatttacatatcttgtaaa-ttttattgaaaactgaacatttcagataataatatattgaggcgattctagtatcagatttctctacacacacc-------caaatgtttcttgctgttgcagagttttgctgtgttgttagatttgttttcatttcctttgtggctagttgtctgtttagtgacttggcctgactacttttgcagagctctaa-cccctgccacgggtgtctaacctttgggcttccctgagccacacataaaatacacgaatactagccatagctgatgagctt-taaaaaaatggtttgtgcatgattttcatgatatccaccaccgcaaataagcaaacaagtccttatattcaaagggttggacatccgtgcctacagcatgtggacactgagctcccagccttttgttaaagctttttatttcatttttaagcttggctttctaagatttatatctaggccagtgtaatttagtgatcaatcaacaatgggtcagttttctggcatg-------acttccatgtacatttgggccatctctgcgagaaggctttgccttccattgtcaggcagtttatgagacagcctttgcttttaccttctgct i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172372247 1044 + 174210431 catgttgttctgtgggtgtctgagtgtctgttatttcttcttcattcttttcttctttctgctccatagtatctccaacatgagatactatgtgttgacttacatgcaagttctccagttttttcttctactgactcagatctgttgttaagaccctctagagatgttttatttcacctactgcacttttcaattcactccagaacttctatttgattcttttaaaacagtttctatttattaatgttctctttttggaaatatatcattgtaatcttttaaaaattctttagacagagtttcttttggtgcttgtacacatttataataactgctgtaaagcctgtgcctatttagtctaaaacctgggtgcatttaggaacattttctgttggctgctttttatcctctgtgtgtggcatactctcctgtttatttacatatcttgtaactttttattgaaaactgaacatttcagataataatatattgaggcgattctagtatcggatttctctacatgctccccc-cctcaaatgtttcttactgttgcagagttttgttgtgttgttagatttgttttcatttcctttgtggctagttgtctgtttagtgacttggcctgactacttctgcagagctctaa-cccctgccacaggtgtccaacctttgggcttccctgagccacacataaaatacatgaatactagccatagctgatgagctt--aaaaaaatggtttgtgcatgattttcatgatatccaccaccgcaaataagcaaacaagtccttatattcaaagggttggacatccgtgcctgcagcatgttgacactgagctcccagccttttgttaaagcttttcatttcatttttaaggttggctttctaagatttatatctaggccagtgtaatttagtgatcaatcaatgatgggtcagttttctggcatg-------acttccctgtacatttgggtcatctctgcgagaaggctctgccttccattgtcaagcagtttatgagacaggctttgcttttaccttctgct i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156240874 1036 + 157873769 catgttgttctgcgggtatctgagtgtctgttattttttcttcattcttttcttctttctgctc----------ctaaaatgagatactgtgtgttgacttaaatgcaagttctccagttttttcttctactgactcagatctgttgttaagaccctctagggatgttttatttcacctatcacacttttcaactcactccagaacttctatttgattcttttgaaacagtttctatttattaatgttcgctttttggaaatatatcattgtaatcttttaaaaattctttagacagagtttctttcggtgctcgtacacatttataataactgctgtaaagcctgtgcctatttagtctaaaatctgggtgcatttaggaacattttctgttggctgctttttatcctctgtgtgtggcatactctcctgtttgtttacatatcttgtaactttttattgaaaactgaacatttcggataataatatattgaggcgattctagtatcagatttctctacacccccgccctcccgaaacgtttcttgctgttgcagagttttgttgtgttgttagatttgttttcatttcctttgtggctagttgtctgtttagtgacttggcctgactacttctgcagagctctaa-cccctgccacggatgtccaacctttgggcttccccgagccacacataaaatacacggatactaaccatagctgatgagctt-aaaaaaagtggtttgtgcttgatttccatgatatccaccaccacacataagcaaacaaatccttatattcaaagggttgcacatccgtgcctacggcgtgtggacacggagctcccaggcttttgttaaagcttttcatttcatttttaagcttggctttctaagatttatatctaggccagtgtaatttagtgatcaatcaacgatgggtcagTTTTCTGGCGTG-------ACTTCCCTGTACATTTGGGCCATCTCTTCGAGAAGACTTTGCCTTCCATTgtcaagcagtttacgagacagcctttgcttctaccttctgtt i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168056867 1027 + 169853907 catgttgttccatgggtgtctgagtgtctgttagttcttcttcattcttttcttctttctgctc----------ctcaaatgagatcctctgtgttgacttacctgccagttctccagttttttcttctcctgactcagctctgttgttaagaccctctagggatgttttatttcacctctcacacttttcaactcactccgggacttctatttgattcttttaaaatagtttctatttattaatgttctctttttggaaacatatcattgtcatcttttaaaaattctttagacagggtttcttttggtgcttgtacacatttataataactgctgtaaaacctgtgcctatttagtctaaaatctgggcgcatttaggaacattttctgttggctgctttttatcctctgtgtgtggcatactctcctgtttatttacatatcttgtaactttttattgaaaactgaacatttcagataataatatattgaggcgattctagtatcggatttctctgcacccccc-------taaacgtttcttgctgttgcagagtttggttgtgttgttagatttgttttcatttcctttgtggctagttgtctgtttagtgacttggcctgactccttctgctgagccctaa-cccctgccacgggtgtccaacttttgggcttccctgagccacacataaaatacacgcacactaaccacagctgatgagctt---aaaaaatggtttgtgcatgattttcgtggtatccaccaccacaaataagcaaacaagtccttgtattcagaggattggacatccgtgcctacagcatgtggacactgagctcccagccttttgttaaagcttttcatttcatttttaagcttggctttctaagatttatatctaggccagtgtaatttagtgatcaatcaatgaagggtcggttttccggcgtg-------acctccctgtacatttgggccatctctgagagaaggttttgccttccattgtcaagcaatttatgagacagcctttgcttttaccttttgct i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169012772 1027 - 170955103 catgttgttccatgggtgtctgagtgtctgttagttcttcttcattcttttcttctttctgctc----------ctcaaatgagatcctctgtgttgacttacctgccagttctccagttttttcttctcctgactcagctctgttgttaagaccctctagggatgttttatttcacctctcacacttttcaactcactccgggacttctatttgattcttttaaaatagtttctatttattaatgttctctttttggaaacatatcattgtcatcttttaaaaattctttagacagggtttcttttggtgcttgtacacatttataataactgctgtaaaacctgtgcctatttagtctaaaatctgggcgcatttaggaacattttctgttggctgctttttatcctctgtgtgtggcatactctcctgtttatttacatatcttgtaactttttattgaaaactgaacatttcagataataatatattgaggcgattctagtatcggatttctctgcacccccc-------taaacgtttcttgctgttgcagagtttggttgtgttgttagatttgttttcatttcctttgtggctagttgtctgtttagtgacttggcctgactccttctgctgagccctaa-cccctgccacgggtgtccaacttttgggcttccctgagccacacataaaatacacgcacactaaccacagctgatgagctt---aaaaaatggtttgtgcatgattttcgtggtatccaccaccacaaataagcaaacaagtccttgtattcagaggattggacatccgtgcctacagcatgtggacactgagctcccagccttttgttaaagcttttcatttcatttttaagcttggctttctaagatttatatctaggccagtgtaatttagtgatcaatcaatgaagggtcggTTTTCCGGCGTG-------ACCTCCCTGTACATTTGGGCCATCTCTGAGAGAAGGTTTTGCCTTCCATTgtcaagcaatttatgagacagcctttgcttttaccttttgct i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163828724 1026 + 165299245 CATGTTGTTCCACAGGTGTCTGAGTGtctgttagtttttcttcattcttttcttctttctgctc----------ctcaAATGAGATCCTCTGTGTTGACTTACCTGCCAGTTCTCCGGTTTTTTCTTCTCCTGACTCAGATCTGTTGTTAAGACCCTCTAGGGATGTTTTATTTCACCTCTCACACTTTTCAACTCACTCCGGGacttctatttgattcttttaaaatagtttctatttATTAATGTTCTCTTTTTGGAAACATATCattgtaatcttttaaaaattctttagacAGAGTTTCTTTTGGTGCTCGTACACATTTATAATAACTGCTGTAAAGCCTGTGCCTATTTAGTCTAAAATCTGGGCGCATTTAGGAACATTTTCTGTTGACTGCTTTTTATCCTCTGTGTGTGGCATACTCTCCTGTTTATTTACATATCTTGTaactttttattgaaaactgAACATTTCAGATAATAATATATTGAGGCGATTCTAGTATCGGATTTCTCTGCA-CCCCC-------TAAACGTTTCTTGCTGTTGCAGAGTTTGGTTGTGTTGttagatttgttttcatttcctttgtggcTAGTTGTCTGTTTAGTGACTTGGCTTGACTCCTTCTGCCGAGCCCTAA-CCCCTGCCACGGGTGTCCAACTTTTGGGCTTCCctgagccacacataaaatacacgcACACTAACCacagctgatgagctt---aaaaaatgGTTTGTGCATGATTTTCGTGGTATCCACCAccacaaataagcaaacaagtcCTTGTATTCAGAGGATTGGATATCCGTGCCTACAGCATGTGGACACTGAGCTCCCAGCCTTTTGTTaaagcttttcatttcatttttaagctTGGCTTTCTAAGATTTATATCTAGGCCAGTGTAATTTAGTGATCAATCAACGATGGGTCGGTTTTCCAGCGTG-------ACCTCCCTGTACATTTGGGCCATCTCTGTGAGAAGGTTTTGCCTTCCATTGTCAAGCAATTTATGAGACAGCCTTTGCTTTTACCTTTTGCT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96608862 1027 + 98384682 catgttgttccacgggtgtctgagtgtctgttagtttttcttcattcttttcttctttctgctc----------ctaaaatgagatcctctgtgttgacttacctgccagttctccagtgttttcttctcctgactcagatctgttgttaagaccctctaggaatgttttatttcacctctcacacttttcaactcactccgggacttctatttgattcttttaaaatagtttctatttattaatgttctcttttaggaaacatatcattgtaatcttttaaaaattctttagacagggtttcttttggtgctcgtacacatttataataactgctgtaaagtctgtgcctatttagtctaaaatctgggcgcatttaggaacattttctgttggctgcttttcatcctctgtgtgtggcatactctcctgtttatttacatatcttgtaactttttattgaaaaccgaacatttcagataataatatattgaggcgattctagtattggatttctctgcacccccc-------taaacgtttcttgctgttgcagagtttggttgtgttgttagatttgttttcatttcctctgtggctagttgtctgtttagtgacttggcctgactccttctgccgagccctaa-cccctgccatgggtgtccaacttttgggcttccctgagccacacataaaatacacgcacactaaccacagctgatgagctt---aaaaaatggtttgtgcatggttttcgtggtatccaccaccacaaataagcaaacaagtccttgtattcagaggattggacatccgtgcctacagcatgtggacactgagctcccagccttttgttaaagcttttcatttcatttttaagcttggctttctaagatttatatctaggtcagtgtaatttagtgatcaatcaatgaagggtcggTTTTCCAGCGTG-------ACCTCCCTGTACATTTGGGCCATCTCTGAGAGAAGGTTTTGCCTTCCATTgtcaagcaatttatgagacagcctttgcttttaccttttgct i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169814621 1030 + 171630274 CACGTtgttcgaaaggtgtctgagtgcctgctattttttcttca----ttttttctttctgctc----------ctgaaatgagatactgtgtgttaacttacctgcaagttctccagttttttcttctgctgactcaaatctgttgttaagaccctctagagatgttctatttcacctatggcacttttcaactcactccagaacttctatttggttcttttaaaatcatttctacttattaatgttctctttttggaaatatactcttgtagtcttgttaaaatgctttaggcagagtttcttttggtgcttgtacacacttataataactgatataaagcctgtgtcttttcaggctaaagtctgggcccatttaggagcattttccgttggctgctttctatcctccgtgtgtggcttactctcttgtttatttacatatcttgtaactttttattgaaaactcaacatttcagataataatacatggaggtgattctagtatcggatttctccacaccccca----------gtgtttgttgtCGTTGCAGAGTTTCGCTGTGTCGTTAGATTTGTTGCCATTTCCTGTGTGGCTGGTTGTCTGTTGAGTGACTTGACCCGACTACTTTGGCAGAGCCCTGATCCCCTCCcgcaggtgtccaacctttcagcctccccgagccacacgtaaattacagtaacactaaccatagctgatgagctttaaaaaaaaagatttctgcctgattttcatgatatctgccaccacaaataagcaagcaagtgtttatattcaaagggctaaacatcTGTGCCTACAGCACGTGGACATGGAGGTCCC-GCCTTTTGTTAAAGCTCTTTACTTTATTTTTAAGCTTGGCTTTCTAAGATTTATATCTAGGCCAGTGTCATTTAGTGATCGAGGAATGATGGGTTGGTTTTCTGGCGTGTTTTAACGTTTCCCTGGACACTTGGGCCATCTCTGTGAGAATGCTTTGCCTTCGATTgtcaggcagtttacgagacagcctttgctttgactttctgct i calJac3.chr4 C 0 C 0 e canFam3.chr1 56104011 5641 + 122678785 I a score=1160370.000000 s hg38.chr6_KB021644v2_alt 12334 373 + 185823 tgcacagggcctcgaggtcagccaggggtgaggggctcctgccttcttcctccccagagctgtcctaggagtgcccgcagtctggcagacatgctcggcct---tgcaggca---------cccagctctcctatgttcatac--gtatccagg-atttccctttaaatttctggtcagtttaaatttctgctctcagtttgccccaacTGAAGT------------------------------CTATTTCTATTGCTTTGGTAATGCTTTTAGGTTCTCCATTCTGTCCTCTCAACCCCAGACACCCCCAACTGAGCTAAGAGTCAAGTG--TAACAGCCCCACACTGAATATAGAGATTTCCCAGGGAGCTGCAAGTTCCTGTGAAATATTGACTATGTTCTGGGCATGTTGTTTTT s panTro4.chr6 170626248 375 + 172623881 tgcacagggcctcgaggtcagccaggggtgaggggctcctgccttcttcctccccagagctgtcctaggagtgcccgcagtctggcagacatgctcggcct---tgcaggca---------cccagctctcctatgttcatacaggtatccagg-atttccctttaaatttctggtcagtttaaatttctgctctcagtttgccccaacTGAAGT------------------------------CTATTTCTATTGCTTTGGTAATGCTTTTAGGTTCTCCATTCTGTCCTCTCAACCCCAGACACCCCCAACTGAGCTAAGAGTCAAGTG--TAACAGCCCCACACTGAATATAGAGATTTCCCAGGGAGCTGCAAGTTCCTGTGAAATATTGACTATGTTCTGGGCATGTTGTTTTT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172373291 376 + 174210431 tgcccagggcctcgaggtcagccaggggtgaggggctcctgcctccttcctccccagggctgtcctaggagtgcccacagtcc-gcagacatgctcggctt---tgcaggca---------cccagctctcctatgttcatccaggtatccagg-atttccctttaaatttctggtcagtttaaatttctgctctcagtttgccctaattgAAGT------------------------------CTATTTCTATTGTTTTGGTACTGCTTTTAGGTTCTCCATTCTGTCCTGTCAACCCCAGACACTCCCAACTGAGCTAAGAGACAAGTGTATAATAGCCCCACACTGAATATAGAGATTTCCCAGGGAGCTGCAAGTTCCTGTGAAATATTGACTATGTTCTCGGAATGTTGTTTTT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156241910 375 + 157873769 tgtacagggcctcgaggtcagccaggggtgagggactcctgcctccttcctccccagggtcgtcctaggagtgcccgcagtccagcagacatgctcggcct---tgcaggca---------ctcagctctcctgtgttcatccaggtatccagg-atttccctttaaatttctggtcagtttaaatttctgctctcagcttgccccaactgAAGT------------------------------CTATTTCTATTGTTTTGGTAATGCTTTTAGGTTCTCCATTCTGTCCTCTCAACCCCAGACACCTCCAACTGAGCTAAGAGTCAAGTG--TAACAGCCCCACACTGAATATAGAGATTTCCCAGGGAGCTGCAAGTTCCTGTGAAATATTGACTATGTTCTGGGAATGTTGTTTTT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168057894 375 + 169853907 tgcacagggcctcgaggtcagccaggggtgaggggctcctgcctccttcctccccagagctgtccgaggagtgcccgtagtccagcacacacgcttagcct---tgcaggca---------cccagctctcctatgttcatccaggtatccagg-atttccctttaaatttctgggcagcttaaatttctgttctcagtttgccccaactgatgt------------------------------ctaTTTCTATTGTTTTGGTAATGCTTTTAGGTTCTCCATTCTGTCCTCCCAACCCCAGACACCCCCAACTGAGCTAAGAGTCAAGTG--TAATAGCCCCACACTGAATATAGAGATTTCCCTGGGAGCTGCAAGTTCCTGTGAAATACTGACTATGTTCTGGGAATGTTGTTTTT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169013799 375 - 170955103 tgcacagggcctcgaggtcagccaggggtgaggggctcctgcctccttcctccccagagctgtccgaggagtgcccgtagtccagcacacacgcttagcct---tgcaggca---------cccagctctcctatgttcatccaggtatccagg-atttccctttaaatttctgggcagcttaaatttctgttctcagtttgccccaactgatgt------------------------------ctaTTTCTATTGTTTTGGTAATGCTTTTAGGTTCTCCATTCTGTCCTCCCAACCCCAGACACCCCCAACTGAGCTAAGAGTCAAGTG--TAATAGCCCCACACTGAATATAGAGATTTCCCTGGGAGCTGCAAGTTCCTGTGAAATACTGACTATGTTCTGGGAATGTTGTTTTT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163829750 371 + 165299245 TGCACAGGGCCTCGAGGTCAGCCAGGGGTGAGGggctcctgcctccttcctccccagaGCTGTCCTAGGAGTGCCCGTAGTCCAGCACACACGCTTAGCCT---TGCAGGCA---------CCCAGCTCTCCTATGTTCATCCAAGTATCCAGG-ATTTCCCTTTAAATTTCTGGGCAGcttaaatttctgttctcagtttGCCCCAACTGAGGt------------------------------ctatttctattgttttggTAATGCTTTTAGGTTCTCCATTCTGTCCTCCCAACCCCAGATACCCCCAACTGAGCTAAGAGTCAAGTG--TAATAGCCCCACACTGAATATAGAGATTTCCCTGGGAGCTGCAAGTTCCTGTGAAAT----ACTATGTTCTGGGAATGTTGTTTTT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96609889 375 + 98384682 tgcacagggcctcgaggtcagccaggggtgaggggctcctgcctccttcctccccagagctgtcctaggagtgcccgtagtccagcacacacgcttagcct---tgcaggca---------cccaCCTCTCCTATGTTCATCCAGGTATCCAGG-ATTTCCCTTTAAATTTCTGGGCAGCTTAAATTTCTGTTCTCAGTTTGCCCCAAATGAGGT------------------------------CTATTTCTATTGTTTTGGTAGTGCTTTTAGGTTCTCCATTCTGTCCTCCCAACCCCAGACACCCCCAACCGAGCTAAGAGTCAAGTG--TAATAGCCCCACACTGAATATAGAGATTTCCCTGGGAGCTGCAAGTTCCTGTGAAATACTGACTATGTTCTGGGAATGTTGTTTTT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169815651 363 + 171630274 tgcacagggcctcggggtcagccaggggc-aggggctgcagcctccttCCTCCCCAGGGATTTCTCAGGAGTGCTCACAGTCCCACAGACATGCTCAGCCC---TGCAGGCA---------CCCAGCTCTCCTCTGTCCATCCAGGTGTCCAGGAATTTCCCTTTACATTTCTGGTCAA-----------GCTCTCAGGTTGCCC-AGCTGAAGT------------------------------CAATTTCTACTGATGTGGTAATGCTCTTAGCTTCTCCATTCTGTCCTCCCAACCCCAGACACCCCCAACTGAGCTAAGAGTCAACTG--CAATAGACAAACTCTGAAGAGAGAGATTTCCCAGGGAGCTGCAAGTTCCTGTGGAATATTGAGGATGTTGTGGGAACGTTGTTTTT i calJac3.chr4 C 0 C 0 s canFam3.chr1 56109652 346 + 122678785 tatacagggcctcaaggtcagctagaggagaatgactcctgccctctt-cttcccaactctttcctaggcatgcacgc-gtct-gcagacatacatagtctatacacagccaggaatatgtttaagcttccct-tgttcatctagtgttccagg-attt-cctttaactttc------------atgtaagttctcagttt-ccccagctgaaatcagagcctgaggcagctgagatACTGCCAGCAGGTGCTATTGTTCTGGTAATGTCCTGAGCT--TCAGTTTTGTCCCTT------------CTCCCAACT-----------------------------------------GAGACTTCCCAGACAGACGCAAGTCCACACATAACGCTCACTGTGTTCTGGGGGTGATGCTTTT i canFam3.chr1 I 5641 I 343 a score=1452017.000000 s hg38.chr6_KB021644v2_alt 12707 511 + 185823 AATGGAATATTGAAATTGGTAACATTTCTTTACCAGCTTTTGACTACCACAAATGGGCTAAGGAGGGAGGAAAAATGAATGTAGCCCCAAATTAAAGTTCT-----------ggggtcctgatccagaccccaggagagggttcttggatctcacacaagaaggaattcagggtgagtccacagtgcagagtaaaaa-aggatgagttcatgtcctttgcagagacatggatgaagctggaaaccatcattctcagcaaactaacacaggaacaaaaaaccaaacaccgcatgttctcactcataaacgggagttgaacaatgagaacacatggacacaaggaggggaacatcacacactggggcctgtcacagggtggggagctaggggagggagagcattaggagaaatacctaatgtagatgacgggttgatgggt-cagcaaaccaccatggcacgtgtatacctatgtaacaaacctgcacgttctgcacatgtatcctggaacttaaagtatTataat------ s panTro4.chr6 170626623 504 + 172623881 AATGGAATATTGAAATTGGTAACATTTCTTTACCAGCTTTTGACTACCACGAATGGGCTAAGGAGGGAGGAAAAATGAATGTAGCCCCAAATTAAAGTTCT-----------ggggtcctgatccagaccccaggagagggttcttggatctcacgcaagaaggaattcagggtgagtccacagtgcagagtaaaaa-aggatgagttcatgtcctttgcagagacatggatgaagctggacaccatcattctcagcaaactagcacaggaacagaaaaccaaacgccgcatgttctcactcataaatgggagttgaacaatgagaacacatggacacaagg-ggggaacatcacacactggggcctgtcagagggtggggcgctaggggagggagagcattagaagaaatacctaatgtagatgacgggttgatgggt-cagcaaaccgccatggcacgtgtatacctacgtaacaaacctgcacgttctgcacatgtatcctggaacttaaagtat------------ i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172373667 523 + 174210431 AATGGAATATTGAAATTGGTAACATTTCTTTACCAGCTTTTGGCTACTACAAATGGGCTAAGGAGGGAGGAAAAATTAATGTAGCCCCAAATTAAAGTTCTGTAAAACgaaagagatcctgatccagaccccaagagagggttcttggatctcacgcaagaaggaattcagggtgagtccacagggcagagtgaaaa-aggatgagttcatgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaaacaccgcatgttctcactcataaatgggagttgaacaatgagaacacatggacacagggaggggaacatcacacactggggcctgtcagagggtggggagctaggggagggagagcattaggagaaatatctaatgtagatgacgggttgatgggtgcagcaaaccaccatggcatgtgtatacctatgtaacaaacctgcgcgttctgcacatgtatcctggaacttaaagtataataat------ i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156242285 516 + 157873769 AATGGAACATTGAAATTGGTAACATTTCTTTACCAGCTTTTGGTTACCACAAATGAGCTAAAGAGGGAGGAAAAATGAATGTAGCCCCAAATTAAAGTTCTTTAacacgaaaggggtcccaatccagaccccaagagaggcttcttggatcttacgcaagaaggaattcagggtgagtccacagtgcagagtaaaaa-tggatgagttcatgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaaagactgcatgttctcactcataagcgggagttgaacaatgagaacacacggacacagggaggggaacatcacacaccagggcctgtcagagggtggggagctaggggagggagagcattaggagaaatatgtaatgtagatgatgggttgatgggt-cagcaaaccaccatggcacttgtatacctatgtaacaaacctgcacattctgcacatgtatcctggaacttaaagtat------------ i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168058269 501 + 169853907 AATGGAATATTGAAATTGGTAAAATTTCTTTGCCAGCTTTTGGCTACCACACATGAGCTAAGGAGGATGGAAAAATGAATGTAGCCCCCAATTAAAGTTCTATAacacgaaaggggtcccgatccaga--------------ttttggatctcacgcaagaaggaattccgggtgagtccacagtgcagagtaaaaa-aggatgagttcatgtcctttgtagggacatggatgaagctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaaacactgcatgttctcactcataagtgggagttgaacgatgagaacacatggatacagggaggggaacatcacacactggggcctgtcatgaggt-gggagct-ggggagcgacagcagtaggagaaatatctaatgtagatgacaggttgatgggtgtagcaaaccaccatggcatgtgtatacctatgtaacaaacctgcacgttctgcacatgcatcctggaacttaaagtat------------ i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169014174 501 - 170955103 AATGGAATATTGAAATTGGTAAAATTTCTTTGCCAGCTTTTGGCTACCACACATGAGCTAAGGAGGATGGAAAAATGAATGTAGCCCCCAATTAAAGTTCTATAacacgaaaggggtcccgatccaga--------------ttttggatctcacgcaagaaggaattccgggtgagtccacagtgcagagtaaaaa-aggatgagttcatgtcctttgtagggacatggatgaagctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaaacactgcatgttctcactcataagtgggagttgaacgatgagaacacatggatacagggaggggaacatcacacactggggcctgtcatgaggt-gggagct-ggggagcgacagcagtaggagaaatatctaatgtagatgacaggttgatgggtgtagcaaaccaccatggcatgtgtatacctatgtaacaaacctgcacgttctgcacatgcatcctggaacttaaagtat------------ i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163830121 502 + 165299245 AATGGAATATTGAAATTGGTAAAATTTCTTTGCCAGCTTTTGGCTACCACACATGAGCTAAGGAGGGTGGAAAAATGAATGTAGCCCCCAATTAAAGTTCTATAACatgaaaggggtcccgatccaga--------------ttTTGGATCTCACGCAAGAAGGAATTCCGGGTGAGTCCACGGTGCAgagtaaaaa-aggatgagttcatgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaaacactgcatgttctcactcataagtgggagttgaacgatgagaacacatggatacagggaggggaacatcacacactggggcctgtcatgaggt-gggagctaggggagggacagcagtaggagaaatatctaatgtagatgacaggttgatgggtgtagcaaaccaccatggcatgtgtatacctatgtaacaaacctgcactttctgcacatgcatcctggaacttaaagtat------------ i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96610264 502 + 98384682 AATGGAATATTGAAATTGGTAAAATTTCTTTGCCAGCTTTTGGCTACCACACATGAGCTAAGGAGGGTGGAAAAATGAATGTAGCCCCCAATTAAAGTTCTATAacatgaaaggggtcccgatccaga--------------ttttggatctcacgcaagaaggaattctgggtgagtccacagtgcagagtaaaaa-aggatgagttcatgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaactaacacagtaacagaaaaccaaacactgcatgttctcactcataagtgggagttgaatgatgagaacacatggacacagggaggggaacatcacacactggagcctgtcatggggt-gggagctaggggagggacagcagtaggagaaatatctaatgtagatgacaggttgatgggtgtagcaaaccaccatggcacgtgtatacctttgtaacaaacctgcacgttctgcacatgcatcctggaacttaaagtat------------ i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169816014 522 + 171630274 AATGGAACATTGAAGTTGGTAAAATCTCTTTACCAGCTTTTGGCTCCCACAAATGAGCTAAGGAGGAAGGAAAAATGAATGTGGCCCCAAAGTAAAGTGCtgtaacgggaa-acggtcccgatccagaccccaagggagggttcttggacttcacgtaagaaagaattcagggtgagtccacagttcagaggaaaaagaaaatgagttcatgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaagcaccgcacgttctcactcatgagtgggagttgaacggtgagaacacatggactcagggaggagaacatcacacactgggg-ctgtcggggggtgagggcctgggggagggagagcatctggagaaatacctaatgtagatgacaggttgatgggtgcagcaaaccactgtggcatgtgtatacttatgtaataaacctgcacattctgcacttgtatcccagaactcaaagtat------aataat i calJac3.chr4 C 0 I 298 e canFam3.chr1 56109998 343 + 122678785 I a score=25238.000000 s hg38.chr6_KB021644v2_alt 13218 26 + 185823 aataataataata---ataataataataa s panTro4.chr6 170627127 17 + 172623881 ---------aata---ataataataataa i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172374190 26 + 174210431 aataataataata---ataataataataa i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156242801 11 + 157873769 ------------------aataataataa i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168058770 17 + 169853907 ---------aata---gtaataataataa i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169014675 17 - 170955103 ---------aata---gtaataataataa i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163830623 17 + 165299245 ---------aata---gtaataataataa i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96610766 20 + 98384682 ---------aataatgatgatgataataa i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169816536 298 + 171630274 I e canFam3.chr1 56109998 343 + 122678785 I a score=1376416.000000 s hg38.chr6_KB021644v2_alt 13244 499 + 185823 taataat-------aaagcaagtttatgaagaaagtaaaggaataaaagaatggctactccatagacagagcagccccaagagctgctggttgcccatttttatggctatttcttgatgatatgctaaacaaggggtggattattcctatctcctctttttaaaccat-tagggtaacttcctgacattgtcatggtacttgtaaact--------gtcatggcgctggtgggagtgtagcagtgaggacagccagaggtcactcttgttgccattttggatttggtgggttttggccggctcctttactgcaacctgttttatcagcaaggtctttgtggtctgtattttgtgctgacctcttatttcatcctgtgacttagaatgccttcaccatctgggaatgcagcccagtaggtctcagcctcgttttacccagctcctatttaagatggagttgctcaggttcacacgcctctgacaGTGCCACCTATCTATTTCACC-----AGCCTCCTGGT s panTro4.chr6 170627144 507 + 172623881 taataat-------aaagcaagtttatgaagaaagtaaaggaataaaagaatggctactccatagacagagcagccccaagagctgctggttgcccatttttatggttatttcttgatgataggctaaacaaggggtggattattcctatctcctctttttaaaccat-tagggtaacttcctgacattgtcatggtacttgtaaacttgtaaactgtcatggcgctggtgggagtgtagcagtgaggacagccagaggtcactcttgttgccattttggatttggtgggttttggccggctcctttactgcaacctgttttatcagcaaggtctttgtggcctgtattttgtgctgacctcttatttcatcctgtgacttagaaagccttcaccatctgggaatgcagcccagtaggtctcagccttgttttacccagctcctatttaagatggagttgctctggttcacacgcctctgacaGTGCCACCCGTCTATTTCACC-----AGCCTCCTGGT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172374216 499 + 174210431 taataat-------aaagcaagtttatgaagaaagtaaaggaataaaataatgactactccatagacagagcagccccaagagctgctggttgcccatttttatggttatttcttgatgatatgctaaacaagaggtggattattcatatctcctctttttagaccat-tagggtaacttcctgacattgtcgtagtacttgtaaact--------gtcatggcgctagtgggagtgtagcagtgaggagagccagaggtcactcctgttgccattttggttttggtgggttttggctggctcctttactgcaacctgttttatcagcaaggtctttgtggcctgtattttgtgctgacctcttatttcatcctgtgacttagaatgccttaaccatctgggaatgcagccccgtaggtctcagcctcgttttacccagctcctgtttaagatagaattgctctggttcacacgcctctgaTGGTGCCACCTATTTATTTCACC-----AGCCTCCAGGT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156242812 492 + 157873769 taataat-------aaagcaagtttatgaagaaagtgaaggaataaaagaatggctactccat----agagcagccccaagagctgctggttgcccatttttatggttatttctttatagtatgctgaacgaggggtggattattcatatctcccctttttagaccatatagggtaacttcctgacattgtcctggtacttgtaaact--------gtcatggcactggtaggagtgtagcagtgaggacagccagaggtcactcttgtcgccattttggttttggtggggtttggccggctcttttactgcgacctgttttatcagcgaggtcttcgtggcctgtattttgtgctgacctcttatttcatcctgtgacttagaatgccttaaccatctgggaatgcagcccagtaggtctcagcctcgttctacccagctgctatttaagatggagttgctgtggttcgcgtgcctctgacaGTGCCACC----TATTTCACC-----AGCCTCCGGGT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168058787 505 + 169853907 taataat-------aaagcaagtttatgaagaaagtaaaggaataaaagaatggctgctccatagacacagcagccccaagggctgctcgttgcccatttttatggctatttcttgatgatatgttaaacaagggatggattattcgtatctcctctttttagaccatatagggtaatgttctgacattgtcatggtgcttgtaaact--------gtcatggcgctgctgggagtgtagcagtgaggtcagccagaggtcactcttgttgccatcttggttttggtggattttggcctgctcctttactgcaccctgttttatcagcaaggtctttaggacctctattttgtgctgacctcctgtctcattctgtgactgagaatgccttcaccatctgggaatgccgcccaggaggtcgcagccttgttttacccaggtcctgtttaagacggagttgctctggttcacacgcctctggcaGTGCCACCTATCTATTTCACCAGACTAGACTCCAGGT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169014692 505 - 170955103 taataat-------aaagcaagtttatgaagaaagtaaaggaataaaagaatggctgctccatagacacagcagccccaagggctgctcgttgcccatttttatggctatttcttgatgatatgttaaacaagggatggattattcgtatctcctctttttagaccatatagggtaatgttccgacattgtcatggtgcttgtaaact--------gtcatggcgctgctgggagtgtagcagtgaggtcagccagaggtcactcttgttgccatcttggttttggtggattttggcctgctcctttactgcaccctgttttatcagcaaggtctttaggacctctattttgtgctgacctcctgtctcattctgtgactgagaatgccttcaccatctgggaatgccgcccaggaggtcgcagccttgttttacccaggtcctgtttaagacggagttgctctggttcacacgcctctggcaGTGCCACCTATCTATTTCACCAGACTAGACTCCAGGT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163830640 505 + 165299245 taataat-------aaagcaagtttatgaagaaagtaaaggaataaaagaatggttgCTCCATAGACacagcagccccaagggctgctcgttgcccatttttatggctatttcttgatgatatgttaaacaagggatggattattcGTATCTCCTCTTTTTATACCATATAGGGTAATGTTCCCACATTGTCATGGTgcttgtaaact--------gtcatggcgcagctgggagtgtagcagtgaggccagccagaggtcactcttgttgccatcttggttttggtggatttgGGCCTGCTCCTTTACTGCaccctgttttatcagcaaagtctttaGGACCtctattttgtgctgacctcctgtctcatcctgtgactgagAATGCCTTCACCATCTGGGAACGCCGCCCAGTAGGTCGCAGCCTCGTTTTACCCAGGTCctgtttaagatggagttgctctggttcgcATGCCTCTGGCAGTGCCACCTATCTATTTCACCAGACTAGACTCCAGAT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96610786 505 + 98384682 taataat-------aaagcaagtttatgaagaaagtaaaggaattaaagaatagctactccatagacacagcaaccccaagggttgctcgttacccatttttatgcctatttcttgatgatatgttaaacaaaggatggattattcgtatctcctctttttagaccatatagggtaatgtcccgacattgtcatggtgcttgtaaact--------gtcatggcactgctgggagtgtagcagtgaggtcagccggagatcactcttgttgccatcttggttttggtggattttggccggctcctttactgcaccctgttttatcagcaaggtctttaggacctctattttgtgctgacctcctgtctcatcctgtgactgagaatgccttcaccatctgggtacgccgcccagtaggtcgcagcctcgttttacccagctcctgtttaagacggagttgctctggttcacatgcctctggcaGTGCCACCTATCTATTTCACCAGACTAGACTCCAGGT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169816834 494 + 171630274 taataattttttaaaaagcaagtttattaagaaagtaaaggaataaaagagtggccactccatagacagagcagcccggagggcccctggctgcccatttttctggctatttcttggtcatacgctaaacaagg--tggattattcacaccttttctttttagaccatataagg-aacttcctgacattgccatggcgtttgtaaact--------gtcatggcactgaggggagggcagcagtgaggacagccagaggtcaccctcgtagccattttggttttggtgg--ttttgccggctccttgcctgcagcctgttttatcagcaaggtctttatgacctg-atcttgtgctgacctcctgtctcatcccgtgacttagaatgccttaaccatctgcaagtgtagcctagtaagtctcagtctcattt-------accctgttcaagatggagtcgctgtggttcacatgcctctgacaGTGCCACCCACCTATTTCACC-----AGATTTCAGGT i calJac3.chr4 I 298 C 0 e canFam3.chr1 56109998 343 + 122678785 I a score=2158758.000000 s hg38.chr6_KB021644v2_alt 13743 683 + 185823 TTCCTTTGGATAGAGAATTTTCAGCGCATTCT-TTGCTTTGGTGAATTACCAGAATTCTGAACTGGCTTATTTTAGTTGTTTTGCAAGTATTTTCACTGTTTTCGTTGGAAAGCAAGCTCACTGAGG-------TCTCACGTTCCAGAAG-----CCAGTCTCTTTCAATGGTATTTGGTGATTGCTAATCTAGAGATAACAATTAGAAAACAAACCCAACCTGGTGTATT---TAAAAAAATACTCAGTGCATTCTAGG-AAACTTCTGGGAATGTTATATTATTTAAAA-----TTT-ATATTATGCTGTAAACTGCAAAGAACATTATTTCCTTATAGTTTTGGGTGCATTGTCATTAATATATATGGAACAAAATAATCTGAAGATATTCTAA--TATACATATA-----------------------------TATTT--TTACTCATACACTATAATACTGAAAATAATAAATGAGGTACAATCATTTTACATACCTCATTATTGTTATTACTTCTTTTTAAAATAACCTCTTTGAGTTATTATT-CACAAATTGAAATGGGAGCATCAC-AAAAATCCTCAGAATTCTCTGGAATTGCTCAGCTAGGGTGCTGCAAGCATCCACACTCTGGACTCACAGGACTTAATGGAAATCAGAGTAATTAAAACAAAG-ACATAAAACGACATTATCGATTAAGTGTAGCAGGG-AAAAATCGAACACTGCATATTGTGGCT- s panTro4.chr6 170627651 683 + 172623881 TTCCTTTGGATAGAGAATCTTCAGCGCATTCT-TTGctttggtgaattaccagaattctgaactggctcattttagttgttttgcaagtattttcactgttttcgttggaaagcaagctcactgagg-------tcTCGCGTTCCAGAAG-----CCAGTCTCTTTCAATGGTATTTGGTGATTGCTAATCTAGAGATAACAATTAGAAAACAAACCCAACCTGGTGTATT---TAAAAAAATACTCAGTGCATTCTAGG-AAACTTCTGGGAATGttatattatttaaaa-----ttt-atattatGCTGTAAACTGCAAAGAACATTATTTCCTTATAGTTTTGAGTGCATTGTCATTAATATATATGGAACAAAATAATCTGAAGATATTCTAA--TATACATATA-----------------------------TATTT--TTACTCGTACACTATAATACTGAAAATAATAAATGAGGTACAATCATTTTACATACCTCATTATTGTTATTACTTCTTTTTAAAATAACCTCTTTGAGTTATTATT-CACAAATTGAAATGGGAGCATCAT-AAAAATCCTCAGAATTCTCTGGAATTGCTCAGCTAGGGTGCTGCAAGCATCCACACTCTGGACTCACAGGACTTAATGGAAATCAGAGTAATTAAAACAAAG-ACATAAAACGACATTATCGATTAAGTGTAGCAGGG-AAAAATCGAACACTGCATATTGTAGCT- i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172374715 714 + 174210431 TTCTTTTGGATAGAGAATTTTCAGCACATTCT-TTGctttggtgaattaccagaattctgaactggcttattttagttgttttgcaagtattttcactgttttcattggaaagcaagctcactgagg-------tcttGCATTCCAGAAG-----CCAGTCTCTTTCAATGGTATTTGGAGATTGCTAATCTAGAGATAACAATTAGAAAACAAACCCAACCTGGTGTATT---TAAAAAAATACTCAGTGCATTCTAGG-AAACTTCTGGGAATGTTATACTATTTAAAATTTACTTT-ATATTATGCTGCAAACTGCAAAGAACATTATTTCCTTACAGTTTTGGGTGCATTGTCATTAATATATATGGAACAAAATAATTTGAAGGTATTCTAA--TATATGTATATATTTTGAAGGTATTCTAATATATGTAAGTATTT--TTACTCATACGCTATAATACTGAAAATAATAAATGAGGTACAATCATTTTACATACCTGATTATTGTTATTA---CTTTTTAAAATAACCTCTTTGACTTATTATT-CAAAAATTGAAATGGGAGCATCAT-AAAAATCCTCAGAATTCTCTGGAATTGCTCAGTTAGGGTGCTGCAAGCATCCACACTCTGGACTCACAGGACTTAATGGAAATCAGAGTAATTAAAACAAAG-ACATAAAATGACATTATCGATCATGTGTAGCAGGG-AAAAAACGAACACTGCATATTGTGGCT- i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156243304 682 + 157873769 TTCCTTTGGATGGAGAATTTTCAGCGCATTCT-TTGctttggtgaattaccagaattctgaactggcttattttagttgttttgcaagtattttcactgttttcgttggaaagcaagctcactgagg-------tctcgcactccAGAAG-----CCAGTCTCTTTCAGTGGTATTTGGCGATTGCTAATCTAGAGATAACAATTAGAAAACAAACCCAACCTGGTGTATT---TAAAAAAAT----AGTGCATTCTAGG-AAACTTCTGGGAATGTTATATTATTTAAAATTTACTTT-ATATTATACTGTAAACTGCAAAGAACGTTATTTCCTTATAGTTTTGGGTGCATTGTCATTAATATATATGGAACAAAATAATCTGAAGGTATTCTAA--TATACATATA-----------------------------TATTT--TTACTCATATGCTATAATACTGAAAATAATAAATGAGGTACAATCATTTTACATACCTGATTATTGTTATTA---CTTTTTGAAATAACCTCTTTGAGTTATTATT-CACAATTTGAAATGGGAGCATCAT-ACAAATCCTCAGAATTCTCTGGAATTGCTCAGTTAGGGTGCTGCAAGCATCCACACTCTGGACTCACAGGACTTGATGGAAATCAGAGTAATTAAAACAAAGTAATTAAAACGACATTATCGATTAAGTGTAGCAGGG-AAAAAATGAACACTGCATATTGTGGCT- i nomLeu3.chr3 C 0 I 108 s rheMac3.chr4 168059292 688 + 169853907 TGCTTTCGGATAGAAAAGTTTCAGCTCATTCT-TTGCTTTGGTGAATTGCCAGAATTCTGAACTGGTTTATTTGAGTTGTTTTGCAAGTATTTTCACTGTTTTAGTTGGAAAGCAAGCTCACTGAGG-------CCTTGCGTTCCAGAAG-----CCAGTCTCTTCCAATGGTGTTTGGCGATTGCTAGTCTAGACATAACAATTAGAAAAGAAGCCCAACCTGGTGCATT-AAAAAAAAAATACTCAGTGCATTCTAGG-AAACTTCTGGGAATGttatattatttaaaatttacttt-atattatGCTGTAAACTGCAAAGAACATTATTTCCCTATGGTTTTGGGTGCATTGTCATTAATATATATGGAACAAAATAATCTGAAGGTATTCTAA--TATACATATA-----------------------------TATTG--TTACTCATACACTATCATACTGAAAATAGTAAATGAGGTACACTCGTTTTACATACCTGATTATTGTTATTA---CTTTTTAAAATAACCTCTTTGAGTTATTATT-CACAAATTGAAAAGGGAGCATTAT-AAAAATCCTCAGAATTCTCTGGAATGGCTGAGTTAGGGTGCTGCAAGCGTCCACACTCTGGACTCACAGGACTTAATGGAAATCAGAGCAATTAACACAAAG-ACATAAAATGAAAATATCGATTAAGTGTAGCAGGGAAAAAAACTAACAGTGCATATTGTGGCT- i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169015197 687 - 170955103 TGCTTTCGGATAGAAAAGTTTCAGCTCATTCT-TTGCTTTGGTGAATTGCCAGAATTCTGAACTGGTTTATTTGAGTTGTTTTGCAAGTATTTTCACTGTTTTAGTTGGAAAGCAAGCTCACTGAGG-------CCTTGCGTTCCAGAAG-----CCAGTCTCTTTCAATGGTATTTGGCGATTGCTAGTCTAGACATAACAATTAGAAAAGAAACCCAACCTGGTGTATT--AAAAAAAAATACTCAGTGCATTCTAGG-AAACTTCTGGGAATGTTATATTATTTAAAATTTACTTT-ATATTATGCTGTAAACTGCAAAGAACATTATTTCCCTATGGTTTTGGGTGCATTGTCATTAATATATATGGAACAAAATAATCTGAAGGTATTCTAA--TATACATATA-----------------------------TATTG--TTACTCATACACTATCATACTGAAAATAGTAAATGAGGTACACTCGTTTTACATACCTGATTATTGTTATTA---CTTTTTAAAATAACCTCTTTGAGTTATTATT-CACAAATTGAAAAGGGAGCATTAT-AAAAATCCTCAGAATTCTCTGGAATGGCTGAGTTAGGGTGCTGCAAGCGTCCACACTCTGGACTCACAGGACTTAATGGAAATCAGAGCAATTAACACAAAG-ACATAAAATGAAAATATCGATTAAGTGTAGCAGGGAAAAAAACTAACAGTGCATATTGTGGCT- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163831145 689 + 165299245 TGCTTTCGGATAGAAAATTTTCAGCTCATTCT-TTGCTTTGGTGAATTGCCAGAATTCTGAACTGgtttattttagttgttttgcaagtattttcacTGTTTTCGTTGGAAAGCAAGCTCACTGAGG-------CCTTGCGTTCCAGAAG-----CCAGTCTCTTTCAATGGTATTTGTCGATTGCTAGTCTAGAGATAACAATTAGAAAAGAAACCCAACCtggtgtattaaaaaaaaaaatactcagtgCATTCTAGG-AAACTTCTGGGaatgttatattatttaaaatttacttt-atattATGCTGTAAACTGCAAAGAACATTATTTCCCTATGGTTTTGGGTGCATTGTCATTAATATATACAGAACAAAATAATCTGAAGGTattctaa--tatacatata-----------------------------tattg--ttaCTCATACACTATCATACTGAAAATAACAAATGAGGTACAATCGTTTTACATACCtgattattgttatta---ctttttaaaataacctctTTGAGTTATTATT-CACAAATTGAAAAGGGTGCATTAT-AAAAATCCTCAGAATTCTCTGGAATGGCTCAGTTAGGGTGCTGCAAGCGTCCACACTCTGGACTCACAGGACTTAATGGAAATCAGAGCAATTAACACAaag-acataaaatgaaaatatcgaTTAAGTGTAGCAGGGaaaaaaaCTAACAGTGCATATTGTGGCT- i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96611291 689 + 98384682 TGCTTTCGGATAGAAAAGTTTCAGCTCATTCT-TTGCTTTGGTGAATTGCCAGAATTCTGAACTGGTTTATTTTAGTTGTTTTGCAAGTATTTTCACTGTTTTAGTTGGAAAGCAAGCTCACTGAGG-------CCTTGTGTTCCAGAAA-----CCAGTCTCTTTCAATGGTATTTGGCGATTGCTAGTCTAGAGATAACAATTAGAAAAGAAACCCAATCTGGTGTATT-AAAAAAAAAATACTCAGTGCATTCTAGG-AAACTTCTGGGAATGTTATATTATTTAAAATTTAGTTT-ATATTATGCTGTAAACTGCAAAGAACATTATTTCCCTATGGTTTTAGGTGCATTGTCATTAATATATATGGAACAAAATAATCTGAAGGTATTCTAA--TAAACATATA-----------------------------TATTG--TTACTCATACACTCTCATACTGAAAATAATAAATGAGGTACAATGATTTTACATACCTGATTATTGTTATTA---CTTTTTAAAATAACCTCTTTGAGTTATTATT-CACAAATTGAAATGGGAGCATTATAAAAAATCCTCAGAATTCTCTGGAATGGCTCAGTTAGGGTGCTGCAAGCGTCCACACTCTGGACTCACAGGACTTAATGGAAATCAGAGCAGTTAAAACAAAG-ACATAAAATGACATTATCGATTAAGTGTAGCAGGGAAAAAAACTAAAAGTGCATATTGTGGCT- i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169817328 680 + 171630274 TTCTTTTGGATAGAAAATTTTCAGCTCATTCT-TTGCTTTGGTGAACGGCCAGAATTCTGAACTGGTTTATTTTAGTTGCTTTGCAAGTATTTTCACTGTTTGAGTTGGA----AAGCTCACTGAGG-------TCTTGCATTCCAGAAGAATGTCTTGTCTCTTTCAGTGGTATTTGGCAGCTGCTAATCTAGAGATAACCATGAGAAAACAAACCCAACATGGTATATT--TTTAAAAAATACTCAGTGCATTCGAGG-AAACTTCTGGGAGTTTTCTACTAATTGAAATTTGCTTT-GTATTATGCAGTAAACTGCAAAGAACATTATTTCCTTATAGATTTGAGTGCATTGTCATTAATGTATATGGAACAAACTGATCTGAAGGTATTCTAT--CATACATATA-----------------------------TATTT--TTCCTCGTACAACATAATACTGAAAATAATGAATGGGGTGCAATCATTTTACAAACCTGATTA---TTATTA---CTTTTTAAAATAACCTCTTTGAGTTATTACT-CACAAATTGAAATGGGAGCATCAT-AAAAACCCTCAGCATTCTGTGGAATTGTTCAG-TAGGGTGTGCCAAGCATC--CACCCCGAACTCACAGGACTTAATGGAAATCAGAGTAATTAAAACAAAG-ACATAAAATGACATTATCGATTAAATGTAGCAAGG-AGAGAACC-GCATTGAATACCATGGCT- i calJac3.chr4 C 0 C 0 s canFam3.chr1 56110341 671 + 122678785 ttctcgtagatagacaattttcagctcattctcttgctttgattaatcaccagaattccgaaatggtttattttaatcattttgccagtatttttattgttttggaggggaagcaagttcactgagacattcactctggcattccagaag-----ccaatct----cagcagtattttGTGATTACTCATCAAGAGACAACCATTAGGAGAA------AACATTGTGTGTT---CAAAGTACCATTTAATGCATTATGGGAAAACTTCCGGGAATTTTGTATTATTTAAATTTTGCTTTCATATTATGCTGTAAACCTCAAAGAAAAAAAATT--TTATAGATTAAACT-CAATGTTATTAACATATGCATAATAAAGTGGGCTGAAAGGATTATAAGGCACACATACA-----------------------------TATTTCATTTCTTATACAACGGAATATTGAATGTAATAAA---AGTACA-CCATTT---GTAGCTGATTCTAATTAGTGCTGTTTTTTAAAAGGACATTTTTGAGTTATCATTAAATGAACTGGGAAGCAAGCTTCAT-GGGAAGCCTCAGCATTCCAGGGATTTACGCAGCCACAGCACTGAAAGCTTCCACACCCAGAACTTAGAGGACTTAATGAAAATCAGAACAATTAGAACAAAG-GAAGGAAACCACACTATCGAT------TAGCAGAG--------CAATTTTTCAAATCCTGGGGC i canFam3.chr1 I 343 C 0 a score=1242939.000000 s hg38.chr6_KB021644v2_alt 14426 442 + 185823 TGAATGGTG-AAGTCTT-GCTGCAGCAGATGCTTTACTGACCTAACGGTATCCTCTCCGTTTTCCCAAGTGACATGCTTGTAGCTTCCTATGAAATAAAAAGCACTTGGGAA-AAGTTATATGGTCT-GGCTATGTGAATTATTAAGTTTGGAGCA-ACCAAGAACTCATAGACTTCTTCTGGGACATTCATTCAAATTAAATTTATATAGGTTTGAATAGTTGCAGAAAATTTCAATGTATCCATTATTGATA--TTTTTTGTGAAAAACCTTGAAACAAATAGAGTTTATATGTTAATACTTTACACATTCTTTTTAGATTTTTTAAATAGTGAATCAAAATATTCAACCTTCTTATGCCTTTTGTGTAATCTCAGAATAC----------------TTGCCTGGACTCTG----------CAGGGAGAGCCCAG-------AAGTG-GCTTCATGTTCTCTGACTTT----GTGCTGCGTTTTC s panTro4.chr6 170628334 442 + 172623881 TGAATGGTG-AAGTCTT-GCTGCAGCAGATGCTTTACTGACCTAACGGTATCCGCTCCGTTTTCCCAAGTGACATGCTTGTAGCTTCCTATGAAATAAAAAGCACTTGGGAA-AAGTTATATGGTCT-GGCTATGTGAATTATTAAGTTTGGAGCA-ACCAAGAACTCATAGACTTCTTCTGGGACATTCATTCAAATTAAATTTATATAGGTTTGAATAGTTGCAGAAAATTTCAATGTATCCATTATTGATA--TTTTTTGTGAAAAACCTTGAAACAAATAGAGTTTATATGTTAATACTTTACACATTCTTTTTAGATTTATTAAATATTGAATCAAAATATTCAACCTTCTTATGCCTTTTGTGTAATCTCGGAATAC----------------TTGCCTGGACTCTG----------CAGGGAGAGCCCAG-------AACTG-GCTTCATGCTCTCTGACTTT----GTGCTGCGTTTTC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172375429 437 + 174210431 TGAATGGTG-AAGTCTT-GCTACAGCAGATGCTTTACTGACCTAACGGTATCCTCTCCGTTTTCCCAAGTGACATGCTTGTAGCTTCCTATGAAATAAAAAGCACTTCGAAA-AAGTTAGATGGTCT-GGCTATGTGAATTATTAAGTTTGGAGCA-ACCAAGAACTCATAGACTTCTTCTGGGACATTCATTCAGATTAAATTTATATAGGTTTGAATAGTTGCAGAAAATCTCAGTGTATCCATTATTGATA-TTTTTTTGTGAAAAACCTTGAAACAAATAG-----ATATATTAATACTTCCCATATTCTTTTTAGATTT-TTAAATATTGAATCAAAATATTCAACCTTCTTATGCCTTTTGTGTAATCTCGTAATAC----------------TTGCCTGGACTCTG----------CAGGGAGAGCCCGG-------AACTG-GCTTCATGTTCTCTGACTTT----GTGCTGCGTTTTC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156244094 442 + 157873769 TGAATGGTG-AAGTCTT-GCTGCAGCAGATGCTTTACTGACCTAATGGTATCCTCTCCATTTTCCCAAGTGACATGCTTGCAGCTTCCTATGAAATAAAAAGCACTTGGGAA-AAGTTAGATGGTCT-GGTT-TGTGAATTATTAAGTTTGGAGCA-ACCAAGAACTCAAAGACTTCTTCTGGGACATTCATTCAAATTAAATTTATATAGGTTTGAATAGTTGCAGAAAATCTCAATGTATCCATTATTGATA-TTTTTTTGTGAAAAACCTTGAAACAAATAGAGTTTATATATTAATACTTTACACATTCTTTTTAGATTTTTTAAATATTGAATCAAAATATTCAACCTTCTTATGCCTTTGGTGTAATCTCGGAATAC----------------TTGCCTGGACTCTG----------CAGGGAGAGCCCGG-------AACTG-GCTTCATGTTCTCTGACTTT----GTGATGTGTTTTC i nomLeu3.chr3 I 108 C 0 s rheMac3.chr4 168059980 443 + 169853907 TGAACGGTG-AAGTCTTCGCTGCAGCAGATG-TTTACCGACCTAACGTTATCCTCTCCGTTTTCCCAAGTGATGTACTTGTAGCTTCCCATGAAATAAAAAGCACTTGGGAA-AAGTTAGATGGTCG-GGCTATGTGAATTACTAAGTTTGGAGCA-ACCAGGAACTCATAGACTTCTTCTGGGACAATCATTCAAATTAAACTTATATGGGTTAGAATAGTTACAGAAAATCTCAGTGTATCCATTATTGACA--TTTTTTGTAAAAAACCTTGAAACAAATAGAGTTTACACATTAATACTTTACACATTATTTTCAGATTTTTTAAATATTGAATCAAAATATTCAACCTTCTTATGTCTTTTGTGTAACCTCGGAAAAC----------------TTGCCTGGACCCCG----------CAGGGAGAGCCCGG-------AACTGTGCTTCATGTTCCCTGACTTT----GTGCTGCCTCTTC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169015884 443 - 170955103 TGAATGGTG-AAGTCTTCGCTGCAGCAGATG-TTTACCGACCTAACGTTATCCTCTCCGTTTTCCCAAGTGATGTACTTGTAGCTTCCCATGAAATAAAAAGCACTTGGGAA-AAGTTAGATGGTCG-GGCTATGTGAATTACTAAGTTTGGAGCA-ACCAGGAACTCATAGACTTCTTCTGGGACAATCATTCAAATTAAACTTATATGGGTTAGAATAGTTACAGAAAATCTCAGTGTATCCATTATTGACA--TTTTTTGTAAAAAACCTTGAAACAAATAGAGTTTACACATTAATACTTTACACATTCTTTTTAGATTTTTTAAATATTGAATCAAAATATTCAACCTTCTTATGTCTTTTGTGTAACCTCGGAAAAC----------------TTGCCTGGACCCCG----------CAGGGAGAGCCCGG-------AACTGTGCTTCATGTTCCCTGACTTT----GTGCTGCCTCTTC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163831834 440 + 165299245 TGAATGGTG---GTCTT-GCTGCAGCAGATG-TTTACCGACCTAACGTTATCCTCTCCATTTTCCCAAGTGATGTGCTTGTAGCTTCCCATGAAATAAAAAGCACTTGGGAA-AAGTTAGATGGTCG-GGCTATGTGAATTACTAAGTTTGGAGCA-ACCAGGAACTCATAGACTTCTTCTGGGACAATCATTCAAATTAAACTTATATGGGTTTGAATAGTTACAGAAAATCTCAGTGTATCCATTATtgata--ttttttgtaaaaaacCTTGAAACAAATAGAGTTTACACGTTAATACTTTACAcattctttttagattttttaaatattgaatcaAAATATTCAACCTTCTTATGTCTTTTGTGTAACCTCGGAAAAC----------------TTGCCTGGACCCTG----------CAGAGAGAGCCCGG-------AACTGTGCTTCATGTTCTCTGACTTT----GTGCTGCCTCTTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96611980 443 + 98384682 TGAATGATG-AAGTCTT-GCGGCAGCAGATGCTTTACTGACCTAATGTTATCCTCTCCATTTTCCCAAGTGATGTGCTTGTAGCTTCCCATGAAAT-CAAAGCACTTGGGAA-AAGTTAGATGGCCG-GGCTATGTGAATTACTAAATTTGGAGCG-ACCAGGAACTCATAGACTTCTTCTGGGACATCCATTCAAATTAAATTTATATAGGTTTGAATAGTTACAGAAAATCTCAGTGTATCCATTATTGATA-TTTTTTTGTAAAAAACCTTGAAACAAATAGAGTTTACACATTAATACTTTACACATTCTTTTTAGATTTTTTAAATATTGAATCAAAATATTCAACCTTCTTATGCCTTTTGTGTAACCTTGGAATAC----------------TTGCCTGGACTCCG----------CAGGGAGAGCCTGG-------AACTGTGCTTCGTGTTCTCTGACTTT----GTGCTGCCTCTTC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169818008 424 + 171630274 TGAATGGTG-GAGTCTT-CGTGCAGGAAATGCTTTGCAGACCTAACGTTGCCCTATCCATTTT-CCAAGTAACATGC-TGTGG-GTCCTATCAAATGCAAAGCCCTTGGG-A-AAGTGAGATGGTCT-GACTACGTGAATTCATAAGTTTGGTACA-ACCAAGGACTCAT--CCTTCTTCTGGGACATTCACTCAGACTGAGCTTAAATACGTTTCAATCATTACAGAAAATCTCGGGGTATCCATTATTGACA--TTTTTTGTAAAAAACTTTGAAATAAATATAGGTTACATATTAATA-------------TTTTAGATTTTTGAAATATTGAATCAAAATATTCAGCCTTTTAAAGGCTTTTGTGTAGTCTGGGAATGT----------------TCGGGAGAGCTGTG----------GAGCAAGAGCCTGG-------GACTGTAGCTCCTGTGCTCTGAGGTT----GTGCTGAGTACTC i calJac3.chr4 C 0 I 1071 s canFam3.chr1 56111012 453 + 122678785 AGAACAGTGAAAGTCAT-AGTCCGGTAGGTACTTTAAAGCTCTAACATTGTCTTACTCGTTTTTGTCAGTGAAATGTTTGTTGTTTCCTGTGAAATAAAAAACAGATGAAAAGAAGTCAGATGGTCTCAACTATGTGGATTATTAAGTCTGGAGTAGAGCAAGAA------------------------CATTGCAGCTAGCTCTATGCAGTTTTACAAAGTTGTGGAAAACCCCTGCGTATCTATCACTGACAGTTTTTTTATGGAAACCTTTGAATCAGATGTATCTTACACACAAATGCTTTACACGT---ATTTGGAATT-TCCCATCCTGGATGGACCCAGCCACCCTTCCTCTGCCTGTCACACAACACCAGCATCCTGAGAGTGGTGTGGGATGGTCCAGGCTCTGATATGAAGTCCAGGGGGCTCCTGGTTTGCTCAGCAG-GCTCC----CCTCCAATGCTAGGAGGGCTGTCTTTTC i canFam3.chr1 C 0 C 0 a score=933889.000000 s hg38.chr6_KB021644v2_alt 14868 371 + 185823 AGCTGCAGATATGTCACAG-ATTTTGGTGAAAGTAATTCCTTTGGCACTTAATCAT--GCATTAGTAGATTTATATTGAAAGATTTTATTGCTGTTTAACTTCCCATATGTTTTCTTTTCTTTTTACTATCACTCTCAACTATATTGTGAGTACTTT-AAAGACAAAAAACAATATTATCCTCTAAAAAATAGTTCTATACTGGCCAGGACTTTGCCTTCTAATTAGTATAATGGCATTTATAA-ATGTTATTAAGTAAAACTTATGCAACTATCTAAGCAGTATCACCC--TTAATAA-AGTAAAGTGAATCTGAGGTCCCAGAAGACTGGAAGAAAAAGAGAA-----CAAACTT----------AAACTAAAGCACAAAATGACTGCTTTA s panTro4.chr6 170628776 370 + 172623881 GGATGCAGATATGTCACAG-ATTTTGGTGAAAGTAATTCCTTTGGCACTTAATCAT--GCATTGGTAGATTTATATTGAAAGATTTTATTGCTGTTTAACTTCCCATATGTTTTCTTTTCTTTTTACTATCACTCTCCACCATATTGTGAGTACTTT-AAAGACAACAAACAATATTATCCTCTAAAAAATAGTTCTATACTGGCCAGGACTTTGCCTTCTAATTAGTATAATGGCATTTATAA-ATGTTATTAAGTAAAACTTATGCAACTATCTAAGCAGTATCACCC--TTAATAA-AGTAAAGTGAATCTGAGGTCCCAGAAGACTGGAAGAAAAAGAGAA-----AAAAGTT-----------CTCTAAAGCACAAAATGACTGCTTTA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172375866 375 + 174210431 AGCTGCAGATATGTCACAG-ATTTTGGTATAAGTAATTCCTTTGGCACTTAATTAA--GCATTGGTAGATTTATATTGAAAGATTTTATTGCTGTTTAACTTCCCATATGTTTTCTTTTCTTTTTACTATCACTCTCAACTATATTGTGAGTACTTT-AAAGACAAAAAACAACATTATCCTCTAAAAAATAGTTCTATACTGGCCAGGACTCTGCCTTCTAATTAGTATAATGGCATTTATAA-ATGTTATTAAGTAAAACTTATGCAACTTTCTAAGCAGTATCACCC--TTAATAA-AATAAAGTGAATCTGAGGTCCCTGAAGACTGGAAGAGAAAGATAA-----TAAACTTA------ACTAAAGTAAAGCACAAAATGACTGCTTTA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156244536 376 + 157873769 AGCTGCGGATATGTCACGG-ATTTTGGTGTAAATAATTCCTTTGGCACTTAATCAA--GCATTGGTAGACTTATATTGAAAGATTTTATTGCTGTTTAACTTCCCATATGTTTTCTTTTCTTTTTACTATCACTCTCAACTATATTGTGAGTACTTTAAAAGACAAAAAACAATATTATCCTCTAAAAAATAGTTCTATACTGGCCAGGACTTTGCCTTCTAATTAGTATAATGGCATTTATAA-ATGTTATTAAGTAAAACTTATGAAACTTTCTAAGCAGTTTTGCCC--TTAATAA-AATAAAGCGAATCTGAGGTCCCTGAAGACTGGAAGAAAAGGAGAA-----TAAACTTA------ACTAAAGTAAAGCACAAAATGACTGCTTTA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168060423 371 + 169853907 AGCTGCAGACAGGTCACAGAATTTTGGTGTAAGTAATTCCTTTGGCACTTAATCAT--GCATTGGTAGACTTATATTGAAATATTTTATTGCTGTTTAACTTCCCATATGTTTTCTTTTCTTTTTATTGTCACTCTCAACTATACTGTGAGTACTTT-AAAGACAGAAAACAATATTATCCTCTAAAAAATAGTTTTATACTGGCCAGGACTTTGCCTTCTAATTAGTATAATGGCATTTATAC-ATTTTATTAAGTAAAACTTATGCAACTTTCTAAGCAGTATCACCC--TTAAAAA-AATAAAGTTAATCTGAGGTCCCTGAAGGCTGGAAGAAAAAGAGAA-----TGAACTG-----------AGGTAAAGCACAAAATGACTGCTTTC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169016327 371 - 170955103 AGCTGCAGACAGGTCACAGAATTTTGGTGTAAGTAATTCCTTTGGCACTTAATCAT--GCATTGGTAGACTTATATTGAAATATTTTATTGCTGTTTAACTTCCCATATGTTTTCTTTTCTTTTTATTGTCACTCTCAACTATACTGTGAGTACTTT-AAAGACAGAAAACAATATTATCCTCTAAAAAATAGTTTTATACTGGCCAGGACTTTGCCTTCTAATTAGTATAATGGCATTTATAC-ATTTTATTAAGTAAAACTTATGCAACTTTCTAAGCAGTATCACCC--TTAAAAA-AATAAAGTTAATCTGAGGTCCCTGAAGGCTGGAAGAAAAAGAGAA-----TGAACTG-----------AGGTAAAGCACAAAATGACTGCTTTC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163832274 371 + 165299245 AGCTGCAGACAGGTCACAGAATTTTGGTGTAAGTAATTCCTTTGGCACTTAATCAT--GCATTGGTAgatttatattgaaatattttattgctgtttAACTTCCcatatgctttcttttctttttattgtcacTCTCAACTATACTGTGAGTActtt-aaagacagaaaacaatattatcctctaaaaaatagttttatactGGCCAGGACTTTGCCTTCTAATTACTATAAtggcatttatat-attttattaagtaaaacTCATGCAACTTTCTAAGCAGTATCgccc--ttaaaaa-aataaagttaatctGGGGTCCCTGAAggctggaagaaaaagagaa-----taaactg-----------AAGTAAAGCACAAAATGACTGCTTTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96612423 376 + 98384682 AGCTGCAGACATGTCACAGAATTTTGGTGTAAGTAATTCCTTTGGCACTTAATCAT--GCATTGGTAGACTTATATTGAAATATTTTATTGCTATTTAACTTCCCATATGTTTTCTTTTCTTTTTATTGTCACTCTCAACTGTACTGTGAGTACTTT-AAAGACAAAAAACAATATTATCCTCTAAAAAATAGTTTTATACTGGCCAGGACTTTGCCTTCTAATTAGTATAATGGCATTTACAC-ATTTTATTAAGTAAAACTCATGCAACTTTCTAAGCAGTATCGCCC--TTAAAAA-AATAAAGTTAATCTGGGGTCCCTGAAGGCTGGAAGAAAAAGAGAATAAACTAAACTG-----------AAGTAAAGCACAAAATGACTGCTTTC i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56111465 369 + 122678785 AGGCTCAGATGTTTCAGAGAACTGGGCTCTATGTAATCCATTTGACACTTAATCACAGGCATCTG-GGACTTATATCGAAAAGCTTCA---CTATGTAACTTCCCACATTTCTGC----------ACTCTGTCCCGCAAGCACTCCGTGAGAACTTT-AAGGACAAAGA--GGTCTCACCCTTTAAAGACTAGCTCCCTGCTGGCCAGCTTCTTGCCTTCCAATCAACACAACAGTATTTCTGTGATTTGATTAAACAAAGGCTGTGCCATTTTCTAAGCAATATCATCCTGTTAAAAATAATAAAGTTAACCTGAGGT-CCTGAAGGCTTGA--AAGAAGAGAA-----TGATCTGAAAATTGACTCCATGAAAGCTCAAAATGACTATTTTA i canFam3.chr1 C 0 C 0 e calJac3.chr4 169818432 1071 + 171630274 I a score=20702.000000 s hg38.chr6_KB021644v2_alt 15239 9 + 185823 CCTGAGTGT s panTro4.chr6 170629146 9 + 172623881 CCTGAGTGT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172376241 9 + 174210431 CCTGAGTGT i ponAbe2.chr6 C 0 I 4408 s nomLeu3.chr3 156244912 9 + 157873769 CCTGAGTGT i nomLeu3.chr3 C 0 I 3 s rheMac3.chr4 168060794 9 + 169853907 CCTGAGTAT i rheMac3.chr4 C 0 C 0 s papAnu2.chr4 163832645 9 + 165299245 CCTGAGTAT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96612799 9 + 98384682 CCTGAGTAT i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56111834 9 + 122678785 CCTGAGAGT i canFam3.chr1 C 0 C 0 e calJac3.chr4 169818432 1071 + 171630274 I e macFas5.chr4 169016698 0 - 170955103 C a score=4711.000000 s hg38.chr6_KB021644v2_alt 15248 3 + 185823 CAC s panTro4.chr6 170629155 3 + 172623881 CAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172380658 3 + 174210431 CAT i ponAbe2.chr6 I 4408 C 0 s rheMac3.chr4 168060803 3 + 169853907 CAT i rheMac3.chr4 C 0 C 0 s papAnu2.chr4 163832654 3 + 165299245 CAT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96612808 3 + 98384682 CAT i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56111843 3 + 122678785 CAT i canFam3.chr1 C 0 C 0 e calJac3.chr4 169818432 1071 + 171630274 I e nomLeu3.chr3 156244921 3 + 157873769 I e macFas5.chr4 169016698 0 - 170955103 C a score=12283.000000 s hg38.chr6_KB021644v2_alt 15251 8 + 185823 TACTAAGG s panTro4.chr6 170629158 8 + 172623881 TACTAAGG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172380661 8 + 174210431 TACTAAGG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156244924 8 + 157873769 TACTAAAG i nomLeu3.chr3 I 3 C 0 s rheMac3.chr4 168060806 8 + 169853907 TACTAAGG i rheMac3.chr4 C 0 C 0 s papAnu2.chr4 163832657 8 + 165299245 TACTAAGG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96612811 8 + 98384682 TACTAAGG i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56111846 2 + 122678785 ----AA-- i canFam3.chr1 C 0 C 0 e calJac3.chr4 169818432 1071 + 171630274 I e macFas5.chr4 169016698 0 - 170955103 C a score=49973.000000 s hg38.chr6_KB021644v2_alt 15259 45 + 185823 CCATCTCTGTTCTGTGGGTGGCGGTGTGGGATCTTCTGCTTCAGA s panTro4.chr6 170629166 45 + 172623881 CCATCTCTGTTCTGTGGGTGGAGGTGTGGGATCTGCTGCTTCAGA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172380669 45 + 174210431 CCATCTCTGTTCTGTGGGTGGAGGTGGGGGATCTGCTGCTTCAGA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156244932 45 + 157873769 CCATCTCTGTTCTGTTGGTGAAGGTGTGGGATCTGCTGCTTCAGA i nomLeu3.chr3 C 0 C 0 s papAnu2.chr4 163832665 45 + 165299245 CCATTTCTCTTCTGTTGGTGGAGGTGTGGAATCTTCTGCTTCAGA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96612819 45 + 98384682 CCATTTCTCTTCTGTTGGTGTAGGTGTGGGATCTTCTGCTTCAGA i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56111848 11 + 122678785 -----------------------GTGTGGGCTCT----------- i canFam3.chr1 C 0 C 0 e calJac3.chr4 169818432 1071 + 171630274 I e rheMac3.chr4 168060814 0 + 169853907 C e macFas5.chr4 169016698 0 - 170955103 C a score=1500.000000 s hg38.chr6_KB021644v2_alt 15304 1 + 185823 C s panTro4.chr6 170629211 1 + 172623881 C i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172380714 1 + 174210431 C i ponAbe2.chr6 C 0 C 0 s macFas5.chr4 169016698 1 - 170955103 C i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163832710 1 + 165299245 C i papAnu2.chr4 C 0 T 65 s chlSab2.chr13 96612864 1 + 98384682 C i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169818432 1071 + 171630274 I e canFam3.chr1 56111859 0 + 122678785 C e nomLeu3.chr3 156244977 0 + 157873769 C e rheMac3.chr4 168060814 0 + 169853907 C a score=10403.000000 s hg38.chr6_KB021644v2_alt 15305 8 + 185823 CTGAGTGT s panTro4.chr6 170629212 8 + 172623881 CTGAGTGT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172380715 8 + 174210431 CTGAGTGT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156244977 8 + 157873769 CTGAGTGT i nomLeu3.chr3 C 0 T 64 s macFas5.chr4 169016699 8 - 170955103 CTGAGTAT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163832646 8 + 165299245 CTGAGTAT i papAnu2.chr4 T 65 C 0 e calJac3.chr4 169818432 1071 + 171630274 I e canFam3.chr1 56111859 0 + 122678785 C e chlSab2.chr13 96612865 0 + 98384682 C e rheMac3.chr4 168060814 0 + 169853907 C a score=65494.000000 s hg38.chr6_KB021644v2_alt 15313 56 + 185823 CATTACTAAGACCATCTCTGTTCTCTTGGTGGCGATGTGGGATCTTCTGCTTCAGA s panTro4.chr6 170629220 56 + 172623881 CATTACTAAGGCCATCTCTGTTCTCTTGGTGGCGGTGTGGGATCTTCTGCTTCAGA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172380723 56 + 174210431 CATTACTAACGCCATCTCTGTTCTGTTGGTGGAGGTGGGGGATCTGCTGCTTCAGA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156244921 56 + 157873769 CATTACTAAAGCCATCTCTGTTCTGTTGGTGAAGGTGTGGGATCTGCTGCTTCAGA i nomLeu3.chr3 T 64 C 0 s macFas5.chr4 169016707 56 - 170955103 CATTACTAAGGCCATTTCTCTTCTGTTGGTGGAGGTGTAGGATCTTCTGCTTCAGA i macFas5.chr4 C 0 T 65 s papAnu2.chr4 163832654 56 + 165299245 CATTACTAAGGCCATTTCTCTTCTGTTGGTGGAGGTGTGGAATCTTCTGCTTCAGA i papAnu2.chr4 C 0 T 65 s canFam3.chr1 56111859 14 + 122678785 ------------------------------------------TCTTCTGCTCCAGA i canFam3.chr1 C 0 C 0 e calJac3.chr4 169818432 1071 + 171630274 I e chlSab2.chr13 96612865 0 + 98384682 C e rheMac3.chr4 168060814 0 + 169853907 C a score=20670.000000 s hg38.chr6_KB021644v2_alt 15369 20 + 185823 CCTGAGTGTCATTACTAAGG s panTro4.chr6 170629276 20 + 172623881 CCTGAGTGTCATTACTAAGG i panTro4.chr6 C 0 I 576 s ponAbe2.chr6 172380779 20 + 174210431 CCTGAGTATCATTACTAACG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156244977 19 + 157873769 -CTGAGTGTCATTACTAAGG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169016698 20 - 170955103 CCTGAGTATCATTACTAAGG i macFas5.chr4 T 65 C 0 s papAnu2.chr4 163832645 20 + 165299245 CCTGAGTATCATTACTAAGG i papAnu2.chr4 T 65 C 0 s canFam3.chr1 56111873 2 + 122678785 --------TC---------- i canFam3.chr1 C 0 C 0 e calJac3.chr4 169818432 1071 + 171630274 I e chlSab2.chr13 96612865 0 + 98384682 C e rheMac3.chr4 168060814 0 + 169853907 C a score=53084.000000 s hg38.chr6_KB021644v2_alt 15389 45 + 185823 CCATCTCTGTTCTGTGGGTGGAGGTGTGGGATCTTCTGCTGCAGA s panTro4.chr6 170629872 45 + 172623881 CCATCTCTGTTCTGTGGGTGGAGGTGTGCGATCTGCTGCTTCAGA i panTro4.chr6 I 576 C 0 s ponAbe2.chr6 172380799 45 + 174210431 CCATCTCTGTTCTGTTGGTGGAGGTGGGGGATCTGCTGCTTCAGA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156244996 45 + 157873769 CCATCTCTGTTCTGTTGGTGGAGGTGTGGGATCTGCTGCTTTAGA i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169016718 45 - 170955103 CCATTTCTCTTCTGTTGGTGGAGGTGTAGGATCTTCTGCTTCAGA i macFas5.chr4 C 0 T 65 s papAnu2.chr4 163832665 45 + 165299245 CCATTTCTCTTCTGTTGGTGGAGGTGTGGAATCTTCTGCTTCAGA i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169818432 1071 + 171630274 I e canFam3.chr1 56111875 0 + 122678785 C e chlSab2.chr13 96612865 0 + 98384682 C e rheMac3.chr4 168060814 0 + 169853907 C a score=1500.000000 s hg38.chr6_KB021644v2_alt 15434 1 + 185823 C s panTro4.chr6 170629917 1 + 172623881 C i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172380844 1 + 174210431 C i ponAbe2.chr6 C 0 C 0 s macFas5.chr4 169016698 1 - 170955103 C i macFas5.chr4 T 65 C 0 s papAnu2.chr4 163832710 1 + 165299245 C i papAnu2.chr4 C 0 C 0 s canFam3.chr1 56111875 1 + 122678785 C i canFam3.chr1 C 0 C 0 e calJac3.chr4 169818432 1071 + 171630274 I e chlSab2.chr13 96612865 0 + 98384682 C e nomLeu3.chr3 156245041 0 + 157873769 C e rheMac3.chr4 168060814 0 + 169853907 C a score=15201.000000 s hg38.chr6_KB021644v2_alt 15435 19 + 185823 CTGAGTGTCATTACTAAGA s panTro4.chr6 170629918 19 + 172623881 CTGAGTGTCATTACTAAGG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172380845 19 + 174210431 CTGAGTGTCATTACTAACG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156245041 19 + 157873769 CTGAGTGTCATTACTAAGG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169016699 19 - 170955103 CTGAGTATCATTACTAAGG i macFas5.chr4 C 0 C 0 s canFam3.chr1 56111876 13 + 122678785 CTGAGTGCTGTGT------ i canFam3.chr1 C 0 C 0 e calJac3.chr4 169818432 1071 + 171630274 I e chlSab2.chr13 96612865 0 + 98384682 C e papAnu2.chr4 163832711 0 + 165299245 C e rheMac3.chr4 168060814 0 + 169853907 C a score=26666.000000 s hg38.chr6_KB021644v2_alt 15454 23 + 185823 CCATCTCTGTTCTGTGGGTGGAG s panTro4.chr6 170629937 23 + 172623881 CCATCTCTGTTCTGTGGGTGGCG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172380864 23 + 174210431 CCATCTCTGTTCTGTTGGTGGAG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156245060 23 + 157873769 CCATCTCTGTTCTGTTGGTGGAG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168060814 23 + 169853907 CCATTTCTCTTCTGTTGGTGGAG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169016718 23 - 170955103 CCATTTCTCTTCTGTTGGTGGAG i macFas5.chr4 C 0 C 0 s canFam3.chr1 56111889 18 + 122678785 CTACCTATGTTTCAGGGG----- i canFam3.chr1 C 0 C 0 e calJac3.chr4 169818432 1071 + 171630274 I e chlSab2.chr13 96612865 0 + 98384682 C e papAnu2.chr4 163832711 0 + 165299245 C a score=38043.000000 s hg38.chr6_KB021644v2_alt 15477 23 + 185823 GTGTGGGATCTGCTGCTTCAGAG s panTro4.chr6 170629960 23 + 172623881 GTGTGGGATCTGCTGCTTCAGAG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172380887 23 + 174210431 GTGTGGGATCTGCTGCTTCAGAG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156245083 23 + 157873769 GTGTGGGATCTGCTGCTTCAGAG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168060837 23 + 169853907 GTGTAGGATCTTCTGCTTCAGAT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169016741 23 - 170955103 GTGTAGGATCTTCTGCTTCAGAT i macFas5.chr4 C 0 C 0 s calJac3.chr4 169819503 23 + 171630274 GTGTGGGATCTTCCATTTCAGAG i calJac3.chr4 I 1071 C 0 e canFam3.chr1 56111907 0 + 122678785 C e chlSab2.chr13 96612865 0 + 98384682 C e papAnu2.chr4 163832711 0 + 165299245 C a score=1275018.000000 s hg38.chr6_KB021644v2_alt 15500 443 + 185823 ACTTTCGCATTACTTTCCATATAGTACTTTTATA----------------------------------------------------------------------------------TAATTGATTCTTCATATTGAAGTTATTTATGTGGATTTAAATGTTAAAATTGAATTATGA---ATTTTATTTCTTAGGTTGCGATGTTTTAATGCTTCA----TTTTTTAA-TCTGTAAAACGTTTAGGATTTAACACCTAAAGTGAGTTTCATCCTTG--------------TGTTGTTTTGTTTTAAGTTTCATTATTTCCCTTT-AAGGAA-AAATGTAGTTTACATTTCGCTTTGGTGGT-----TACAAAGCACAAAGCATGCCTCTAAACCGTAAGTAAATTAACAGTAAGAAATCCAAGA-----------AAACCCAGCAAGGATGGTAAAGGCATTGCAAAAGTG----TAGGGAAAGTCAGTGTAACGACACCATGATGGCCATTTCTAGATGAAACATATTTTAGCTCTTTCTTTTTAATTTATTCTCTGCTGAA-AAACATA s panTro4.chr6 170629983 443 + 172623881 ACTTTCGCATTACTCTCCATATAGTACTTTTATA----------------------------------------------------------------------------------TAATTGATTCTTCATATTGAAGTTATTTATGTGGATTTAAATGTTAAAATTGAATTATGA---ATTTTATTTCTTAGGTTGTGATGTTTTAATGCTTCA----TTTTTTAA-TCTGTAAAACGTTTAGGATTTAACACCTAAAGTGAGTTTCATCCTTG--------------TGTTGTTTTGTTTTAAGTTTCATTATTTCCCTTT-AAGGAA-AAATGTAGTTTACATTTCGCTTTGGTGGT-----TACAAAGCACAAAGCATGCCTCTAAACCATAAGTAAATTAACAGTAAGAAATCCAAGA-----------AAACCCAGCAAGGATGGTAAAGGCATTGCAAAAGTG----TAGGGAAAATCAGTGTAACGACACCATGATGGCCATTTCTAGATGAAACATATTTTAGGTCTTTCTTTTTAATTTATTCTCTGCTGAA-AAACATA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172380910 446 + 174210431 ACTTTAGCATTACTTTCCATATAGCACTTTTATA----------------------------------------------------------------------------------CAATTGATTCTACATATTGAAGTTATTTATGTGGATTTAAATGTTAAAATTGAATTATGA---ATTTTATTTCTTAGCTAGTGACGTTTTAATGCTTCATTTTTTTTTTTA-TCAGTAAAACGTTTAGGATTTAACACCTAAAGTGGGTTTCATTCTTG--------------TGTTG-CTTGTTTTAAGTTTCATTATTTCCCTGTAAAGGAA-AAATGTAGTTTACATTTCACTTTGGTGGT-----TACAAAGCACAAAGCATGCCTCAAAACCATAAGTAAATTAACAGTAAGAAATCCAAGA-----------AAACCCAGCAAGGATTGTAAAGGCATTGCAAAAGTG----TAGGGAAAATCAGTATAATGACAACACGATGGACATTGCTAGATGAAACATATTTTAGGTC-TTCCTTTTAATTTATTCTCTGGTGAA-AAACATA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156245106 436 + 157873769 ACTTTAGCATTACTTTCCATATAGCACTTTTATA----------------------------------------------------------------------------------TAATTGATTCTACATATTGAAGTTATTTATGAGGATTTAAATGTTAAAATTGAATTATGA---ATTTTATTTCTTAGCTAGTGACGTTTTAATGCTTCA----TTTTTTAA-TCAGTAAAACGTTTAGGATTTAACACCTAAAGTGGGTTTCATTCTTC--------------TGTTGTTTTGTTTTAAGTTTCATTATTTCCCTGT-AAGGAA-AAATGTAGTTTACATTTCACTTTGGTGGT-----TACAAAGCACAAAGCATGCCTCAAAACCATGAGTAAATGAACAGTAAGAAATCCAAGA-----------AAACCCAGCAAAGATTGTAAAG-----GCAAAAGTG----TGGGGAAA-TCAGTGTAATGACAACATGATGGCCATGTCTAGATGAAACGTATTTTAGGTC-TTTCTTTTAATTTATTCTCTGGTGAA-AAACATA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168060860 524 + 169853907 ACTTTAGCATTCCTTTCCATGTAGCATTTTTACATAATTGATTCTACATTTTGAAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATTGATTCTACATTTTGAAGTGATTTATGTGTATTTAAATGTTAAAATTGAATTATGA---ATTTTATTTCTTAGCTAGTGACGTTTTAATGCTTCA----TTTTTTAATTCAGTAAAATGTTTAGGATTTAACACCTAAAGTGGGTTTCATTCTTG--------------TGTTGTTTTGTTTTAAGTTTCATTATTTCCCTGT-AAGGAA-AAATGTAGTTTACATTTCACTTTGGTGGT-----TACAAAGCA-AAAGCATGCCTCAAAACCATAAGTAAATTAACAGTAAGAAATCCAAAA-----------CAACCCAGCAAGGATTGTAAAGGCATTGCAAAAGTG----TAGGGAAAATAAGTGTAACGACAACATGATGGGCATTTCTAGATGAAACATATTATAGGAC-TTTCTTTTAATATATTCTCTAGGGAA-AAACATA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169016764 442 - 170955103 ACTTTAGCATTCCTTTCCATGTAGCATTTTTACA----------------------------------------------------------------------------------TAATTGATTCTACATTTTGAAGTGATTTATGTGCATTTAAATGTTAAAATTGAATTATGA---ATTTTATTTCTTAGCTAGTGACGTTTTAATGCTTCA----TTTTTTAATTCAGTAAAATGTTTAGGATTTAACACCTAAAGTGGGTTTCATTCTTG--------------TGTTGTTTTGTTTTAAGGTTCATTATTTCCCTGT-AAGGAA-AAATGTAGTTTACATTTCACTTTGGTGGT-----TACAAAGCA-AAAGCATGCCTCAAAACCATAAGTAAATTAACAGTAAGAAATCCAAAA-----------CAACCCAGCAAGGATTGTAAAGGCATTGCAAAAGTG----TAGGGAAAATAAGTGTAACGACAACATGATGGGCATTTCTAGATGAAACATATTATAGGAC-TTTCTTTTAATATATTCTCTAGGGAA-AAACATA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163832711 442 + 165299245 ACTTTAGCATTCCTTTCCATGTAGCATTTTTACA----------------------------------------------------------------------------------TAATTGATTCTACATATTGAAGTGATTTATgtgcatttaaatgttaaaattgaattatga---attttatttcttagcTAGTGACGTTTTAatgcttca----ttttttaattcagtAAAATGTTTAGGATTTAACACCTAAAGTGGGTTTCAttcttg--------------tgttgttttgttttaaggttCATTATTTCCCTGT-AAGGAA-AAATGTAGTTTACATTTCACTTTGGTGGT-----TACAAAGGA-AAAGCATGCCTCAAAACCATGAGTAAATTAACAGTAAGAAATCCAAAA-----------CAACCCAGCAAGGATTGTAAAGGCATTGCAAAAGTG----TAGGGAAAATAAGTGTAATGACAACATGATGGGCATTTCTAGATGAAACATATTATAGgac-tttcttttaatatattctctagggaa-aaacata i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96612865 442 + 98384682 ACTTTAGCATTCCTTTCCATGTAGCATTTTTACA----------------------------------------------------------------------------------TAATTGATTCTACATATTGAAGTGATTTATGTGCATTTAAATGTTAAAATTGAATTATGA---ATTTTATTTCTTAGCTAGTGATGTTTTAATGCTTCA---TTTTTTTAATTCAGTAAAATGTTTAGGATTTAACACCTAAAGTGGGCTTCATTCTTG--------------TGTTGTTTTGTTTGAAGGTTCATTATTTCCCTGT-AAGGAA-AAATGTAGTTTACTTTTCACTTTGGTGGT-----TACAAAGCA-AAA-TATGCCTCAAAACCATAAGTAAATTAACAGTAAGAAATCCAAAA-----------CAACCCAGCAAGGATTGTAAAGGCATTGCAAAAGTG----TAGGGAAAATAAATGTAATGACAACATGATGGGCATTTCTAGATGAAACATATCATAGGAC-TTTCTTTTAATGTATTCTCTAGGGAA-AAACATA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169819526 454 + 171630274 ACTTCAGCATTAATTTCCATGTAACACTTTTAAG----------------------------------------------------------------------------------TAATTGATTCTACATATTGAAGTTATTTATGTGAATTTAAAGGTTAAAACTGAATTATGA---ATTTCATTTCTTAGCTAGTGACTTTTTAATGCTTCG----TCTTTTAATTCAGCAAAACGTATCGGATTTAACACCTAAAGTGCGTTTCACTTTTG--------------TGTCGTGTTGTTTTAAGGTTCATTATTTCCCTGT-AAGAAACAAATGTAGTTTACACTTCACTTTGCTGGT-----TACAAAACACAAAACATGTCTCAAAACGATAAGTAAATTAACAGTAAGAAATGCAAAAAAAAAAAAAACAAAACCAGCAGGAATTGTAAACGCATTGCAGAAGTA----TAGAGCAAATAAGCTTAATGGCAACAAGATGGGCATTTCTAGATGAAACATAGC-TAGGTC-TTTCTTTTAGTTCATTCTCTAGTGAA-AATCATC i calJac3.chr4 C 0 C 0 s canFam3.chr1 56111907 417 + 122678785 ----------------------------------------------------------------------------------------------------------------------ACAGATTTTAAATCATGAAGACACACACACACATTCACA-ACTAAAATTGAATTATTAATCATTGTCTTACCTAAACAGTGACTTTCT-ATGCTTCC----TCTTTTGATTCACTAAAATATTTCAGACCTAACATCTAAGATAGGTTTCTTTCTAGTTATTTTTTGTTGTTGTTGTTTCGTTTTAGGGTTTATTATTT-CCTGT-GAAGAA-AACTGTAATTTTGACCTCACTTTGCTCGTTCATGTGCAAAACACAGATCATTCCTCAAAATCATCAGTAAATTAAAAATGAGAAATCAGGAA-----------G-----AGCAAAGAGTGTAAATGCACTGCAAAAGAAGTACCAGTGAAGATAGGCTTAGTGGCAACAAGAATGGCAATTTTA---------ttttatttact-atttttaaaatttaaattctagctaattaacata i canFam3.chr1 C 0 I 3611 a score=1204927.000000 s hg38.chr6_KB021644v2_alt 15943 411 + 185823 ATTTTTAAACTTTGTTCTCCATTTTGCATGTATACAATATTAGATGAATGTACAAATATGTTGTTTAAGTATCTTAGAAACTTAAGAATATGGAAAATAAAACCA-CTTTTGGGGTTGGGGTTTCCTCAAGCCATTCTTATTTACTGAGTCGGTTGCCTCTGGAAACTTTTAGCTCATGTAACTAAACATCGTTCACTGCCCTGTTCTTTATGCATCTCAGTAAGTTCCACCTGCAGAATGGTGAAATTTTGAAGTGGAAAGGACCTTGATCATAAATTAGTTCAATCTCTATAGATGGTTAAAAGGCACAATTAGGTAAGTAagatctgccatttattaaggacccagt-aggcatttggtgttttgcatgcattatttctcatgtttatacaaacccaaaaagatattct--c s panTro4.chr6 170630426 411 + 172623881 ATTTTTAAACTTTGTTCTCCATTTTGCATGTATACAATATTAGATGAATGTACAAATATGTTGTTTAAGTATCTTAGAAACTTAAGAATATGGAAAATAAAACCA-CTTTTGGGGTTGGAGTTTCCTCAAGCCATTCTTATTTATTGAGTCAGTTGCCTCTGGAAAATTTTAGCTCATGTGACTAAACATCGTTCACTGCCCTGTTCTTTATGCATCTCAGTAAGTTCCACCTGCAGAATGGTGAAATTTTGAAGTGGAAAGGACCTTGATCATAAATTAGTTCAATCTCTATAGATGGTTAAAAGGCACAATTAGGTAAGTAagagctgccatttattaaggacccagt-aggcatttggtgttttgcatgcattatttctcatgtttatacaaacccaaaaagatattct--c i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172381356 412 + 174210431 ATTTTTAAACTTTGTTCTCCATTTTGCATGTATACAATATTAGATGAATGTACAAGTATGTTATTTAAGTATCTTAGAAACTTAAGAATATGGAAAATAAAACCATTTTTTGGGGTGGGAGTTTCCTCAAGCCATTCTTATTTATTGAGTCGGTTGCCTCTGGAAAATTTTAGCTCATGTGACTAAACATCATTCACTGCCCTGTTCTTTATGCATCTCAATAAGTTCCACCTGCAGAATGGTGAAATTTTGAAGTGGAAAGGACCTTGATCATAAATTAGTTCAATCTCTATAGATGGTTAAAAGGCACAATTAGATAAGTAagagctgccacttattaaggacccagt-aggcatttggtgttttgcatgcattatttctcatgtttatacaaacccaaaaagatattct--c i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156245542 411 + 157873769 ATTTTTAAACTTTGTTCTCCATTTTGCATGTATACAATATTAGATGAATGTACAAGTATGTTATTTAAGTATCTTAGAAACTTAAGAATATGGAAAATAAAACCA-TTTTTTGGGTTGGAGTTTCCTCAAGCCATTCTTATTTATTGAGTCGGTTGCCTCTGGAAAATTTTAGCTCAGGTGACTAAACATCATTCACTGCCCTGTTCTTTATGCATCTCAATAAGTTCCACCTGCAGAACGGTGAAATTTTGAAGTGGAAAGGACCTTGATCATAAATTAGTTCAATCTCTATAGATGGTTAAAAGGCACAATTAGATAAGTAagagctgccatttattaaggacccagt-aggcatttggtgttttgcatgcattatttctcatgtttatacaaacccaaaaagatattct--c i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168061384 409 + 169853907 ATTTTTAAACTTTGTTCTCCATTTTGTATGTATATAATATTAGCTGAATGTACAAATATGTTGTTTAAGTATCTTAGAAACTTAAGAATATGGCAAATAAAACTA-TTTTTTGGGTTGGAGTTTCCTCAAGCCATTCTTATTTATTGAGTCAGTTGCC-CTGGAAAATTTTAGCTCATGTGACTAAACGTGATTCACTGCCCTATTCTTTATGCATCTCAGTAAGTTCCAACTGCAGAATGGTGAAATTTTGAAGTGGAAAGGACCTTGGTCATAAATTAGTTCAATCTCTATAGATGGTTAAAAGGCACAATTAGGTAAGTAagaactaccatttattaaggacccagt-aggcatttggtgttttgcatgcattatttctcatgtttatacaaacccaaaaagatactct--- i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169017206 409 - 170955103 ATTTTTAAACTTTGTTCTCCATTTTGTATGTATATAATATTAGCTGAATGTACAAATATGTTGTTTAAGTATCTTAGAAACTTAAGAATATGGCAAATAAAACTA-TTTTTTGGGTTGGAGTTTCCTCAAGCCATTCTTATTTATTGAGTCAGTTGCC-CTGGAAAATTTTAGCTCATGTGACTAAACGTGATTCACTGCCCTATTCTTTATGCATCTCAGTAAGTTCCAACTGCAGAATGGTGAAATTTTGAAGTGGAAAGGACCTTGGTCATAAATTAGTTCAATCTCTATAGATGGTTAAAAGGCACAATTAGGTAAGTAagagctaccatttattaaggacccagt-aggcatttggtgttttgcatgcattatttctcatgtttatacaaacccaaaaagatactct--- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163833153 411 + 165299245 atttttaaactttgttctcCATTTTGTACGTACATAATATTAGCTGAATGTACAAATATGTTGTTTAAGTATCTTAGAAACTTAAGAATATggcaaataaaacta-ttttttaggTTGGAGTTTCCTCAAGCCGTTCTTATTTATTGAGTCAGTTGCC-CCGGAAAATTTTAGCTCATGTGACTAAACGTGATTCACTGCCCTATTCTTTATGCATCTCAGTAAGTTCCAACTGCAGAATGGTGAAATTTTGAAGTGGAAAGGACCTTGGtcataaattagttcaatctcTATAGATGGTTAAAAGGCACAATTAGGTAAGTAAGAGCTACCATTTATTAAGGACCCAGTAAGGCATTTGGTGTTTTGCATGCATTATTTCTCATGTTTATACAAACCCAAAAAGAtactctc-- i papAnu2.chr4 C 0 I 306 s chlSab2.chr13 96613307 410 + 98384682 ATTTTTAAACTTTGTTCTCCATTTTGCATGTATACAATATTATCTGAATGTACAAATACGTTGTTTAAGTACTTTATAAACTTAAGAATATGGCAAATAAAACTA-TTTTTTGGGTTGGAGTTTCCTCAAGCCGTTCTTATTTATTGAGTCAGTTGCC-CCGGAAAATTTTAGCTCATGTGACTAAACATCATTCACTGTCCTATTCTTTATGCCTCTCAGTAAGTTCCAACTGCAGAATGGTGAAATTTTGAAGTGGAAAGGACCTTGATCATAAATTAGTTCAATCTCTATAGATAGTTAAAAGGCACAATTAGGTAAGTAAGAGCTGCTGTTTATTAAGGACCCAGT-AGGCATTTGGTGTTTTGCATGCATTATTTCTCATGTTTATACAAACCCAAAAAGATACTCT-C- i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169819980 410 + 171630274 ATTCTTAAACTGTGTTCTCCGTTTGGCATATATGAAATATCTGATGGATGTAGAAATACGTTGTCTAAGTGTCTCAGAAATTTGAGAATGTGGCAAATAAAAGTG-TTTTTTGAGTTAG-GTTTCCTCAAGCCATTCTTCCTTATTGAGTCAGTTGCCTCTGGAAGGTTTTAGCTCATGTGACTGAGCATCCTTCCCTGCCCTATTCTTTGTGCATCTCAGTAAGTTCCAGCTGTGGGATGGTGAAATTGTGAAGTGGAAAGGACCTTGATCACAAAAGAGTTCAACCTCTACAGGTGGTTAAAAGGCACAATTACGTAAGTAagagcggccatttattaaggacccagt-agtcacttggtgttttgcatacattatgtcttatgtctttgcaaacccaaaaagatactct--c i calJac3.chr4 C 0 C 0 e canFam3.chr1 56112324 3611 + 122678785 I a score=1047036.000000 s hg38.chr6_KB021644v2_alt 16354 380 + 185823 ccctcttttttaaaagaagacattaagatgtagaaaagttatttgccctagcaaaaactagtggcacagattcaagtccaggttagcctgtctccagttcatcctcctGTTCTCCAGT--------------CCTTGTTGCTTTCTCTTGAAATTAGATTCTAGATTCTTGGATTCCTCCTCCAAAGCTTTTCCTATCCTAGCACTATCTCCAATATCACAAAAGGATTTGGAAATATATTGCTTCTATATCCCTAATATACAATAGGGATCTATTGCATTTCTGAAATAATGTTAGTTCTATT-AATTTTTTATTAAATTTAATAGAAATTTCTTTTAAAATTTTTATTAAATCTTTTTTATTAA-AATTTTTTCAGCTCCTTGCTCTTTACTTT s panTro4.chr6 170630837 380 + 172623881 ccctcttttttaaaagaagacattaagatgtagaaaagttatttgccctagcaaaaactggtggcacagattcaagtccaggttagcctgtctccagttcatcctcctGTTCTCCAGT--------------CCTTGTTGCTTTCTCTTGAAATTAGATTCTAGATTCTTGGATTCCTCCTCCAAAGCTTTTCCCATCCTAGCACTATCTCCAATATCACAAAAGGATTTGGAAATATATTGCTTCTATATCCCTAATATACAACAGGGATCTATTGCATTTCTGAAATAATGTTAGTTCtatt-aattttttattaaatttaatagaaatttcttttaaaatttttattaaatcttttttattaa-atttttttCAGCTCCTTGCTCTTTACTTT i panTro4.chr6 C 0 I 318 s ponAbe2.chr6 172381768 380 + 174210431 ccctcttttttaaaagaagacattaagatgtagaaaagttatttgccctagcaaaaactggtggcacagattcaagtccaggttagcctgtctccagttcatcctcctGTTCTCCAGT--------------CCTTGTTGCTTTCTCTTGAAATTAGATTCTAGATTCTTGGATTCTTCCTCCAATGCTTTTCCCATCCTAGCACTATCTCCAATATCACAAAAGGATTTGGAAATATATTGCTTCTATATCCCTAATATAAAATAGGGATGTATTGCATTTCTGAAATAATGTTAGTTCtatt-aattttttattaaatttaatagaaatgtctttacaaatttttattaaatcttttttattaa-atttttttCAGCTCCTTGCTCTTTACTTT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156245953 366 + 157873769 ccctcttttttaaaagaagacagtaaggtgtagaaaagttatttgccctagcaaaaactggtggcacagattcaagtccaggttagcctgtctccagttcgtcctcctGTTCTCCAGT--------------CCTTGTTGCTTTCTCTTGAAATCAGATTCTAGATTCTTGGATTCCTCCTCCAATGCTTTTCCCATCCTAGCACTATCTCCAATATCACAAAAGGATTTGGAAATATATTGCTTCTATATCCCTAATATACAATAGGGATGTATTGCATTTCTGAAATAATGTTAGTTCTATT-AATTTTTTATTAAATTTAACAGAAATTTCTTTTAAAATTTTTATTAAAT---------------TTTTTTCAGCTCCTTGCTCTTTACTTT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168061793 380 + 169853907 ccctctttttttaaagaagacattaagatgtagaaaagttatttgccctagcaaaaaccggtggcacagattcgagtccaggttagcctgtctccagttcatcctcctGTTCTTCAGT--------------CCTTGTTGCTTTCTCTTGAGATTAGATTCTAGGTTCTTGGATTCCTCCTCCAATGCTTTTCCCAT-CTAGCACTATTTCTGATAACACAAAAGGATTTGGAAATATATTGTTTCAATATCCCTAATATATAATAGGGATCTATTGCATTTCTGAAATAATGTTAGTTCtattaaatttttaattaaatttaatagaaatttcttttaaattttttattaaaatttttttattaa-atttttttCAGCTCCTTGCTCATTACTTT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169017615 380 - 170955103 ccctcttttttgaaagaagacattaagatgtagaaaagttatttgccctagcaaaaaccggtggcacagattcgagtccaggttagcctgtctccagttcatcctcctGTTCTTCAGT--------------CCTTGTTGCTTTCTCTTGAGATTAGATTCTAGATTCTTGGATTCCTCCTCCAATGCTTTTCCCAT-CTAGCACTATTTCTGATAACACAAAAGGATTTGGAAATATATTGTTTCAATATCCCTAATATATAATAGGGATCTATTGCATTTCTGAAATAATGTTAGTTCtattaaatttttaattaaatttaatagaaatttcttttaaattttttattaaaatttttttattaa-attttttTCAGCTCCTTGCTCATTACTTT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163833870 381 + 165299245 ccctcttttttaaaagaagacgtTAAGATGTAGAAAAGTTATTTGCCCTAGCAAAAACCGGTGGCACAGATTCAAGTCCAGGTTAGCCTGTCTCCAGTTCATCCTCCTGTTCTTCAGT--------------CCTTGTTGCTTTCTCTTGAGATTAGATTCTAGATTCTTGGATTCCTCCTCTAATGCTTTTCCCAT-CTAGCACTATCTCTGATAACACAGAAGGATTTGGAAATATATTGCTTCAATATCCCTAATATACAATAGGGATCTATTGCATTTCTGAAATAATGTTAgttctattaaattttttattaaatttaatagaaatttcttttaaattttttattaaaatttttttattaatttttttttcagcttcttgCTCATTacttt i papAnu2.chr4 I 306 C 0 s chlSab2.chr13 96613717 379 + 98384682 -CCTCTTTTTTAAAAGAAGACATTAAGATGTAGAAAAGTTATTTGCCCTAGCAAAAATCGGTGGCACAGATTCGAGTCCAGGTTAGCCTGTCTCCAGTTCATCCTCCTGTTCTTCAGT--------------CCTTGTTACTTTCTCTTGAGATTAGATTCTAGATTCTTGGATTCCTCCTCCAATGCTTTTCCCAT-CTAGCACTATCTCTGATAACACAAAAGGATTTGGAAATATATTGTTTCAATATCCCTAATATATAATAGGGATCTATTGCATTTCTGAAATAATGTTAGTTCtattaaattttttattaaatttaatagacattt-tttcaaaatttttattaaaatttttttattaaattttttTTCAGCTCCTTGCTCATTACTTT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169820390 346 + 171630274 -ccctctttttaaaaaaagacattaagatgttgaaaagctatttgccctagcaagcactggtggcatagattcagctccagctcagtctgtctccaCTTCGTCCTCCTGTTCTCCAGTCCTCTGCAGCCACACCTCGTTGCTGTCTCTGGAAATTAGATCCTCGATTCTTGGAGTCCGCCTCCAGTGCTTTTCCCATCCTAGCACTATCTCTGATAACACCAAAGGACTTGGAAATACTTCGCTTCAATATCCCTAATATACAATAGTGATCCATTGCATTTCTGAAATAATGTTAGTTCTTTC--------------------------TTTCTTT----------------------TTATTAG-TTTTTGTCCGGCTCCTTGCTCTTTACTTT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56112324 3611 + 122678785 I a score=3194535.000000 s hg38.chr6_KB021644v2_alt 16734 1126 + 185823 AAAACTGTTTTTCCTTTGTCTTCCAACACATCAACAAAAGGACTtatccaggatgggtgaaaaa-aatcacacagcaaaagaataagaagacagaacaaccaacaaagaagagaaaaatttaaacaaatgatttatgacagaagatatataaatggaaaataaccac-atgaaatcaacagcattatttaccaggaaaatgcaaatatgaaagcacaatgatatatcacctcaaaccaaccacaa--tggataatagtaaaaaaccctgacaattctaagtgtcggtgtagttataataagcaactaaaattttcattcattcctagtaagaatgtaaattagtgcaaacactttggaaattatgttggcagtttattacagagtgaaaaatacacctaaaatatgacccagccatggcattcctacatctttaatcaacagaaatgaaagcaagatccatccaaagatgtgtatagaaatacccacatcagctttgttgatatgagttaaattggaagcagcccaatgcccatcaacagttgaatggataaataaattgtgttggagtaaaagaatggaatactattcaaaaggatgaacaatatattgatacatagaacaacctcaatacttttggaaatcatcataacgaccaaaagaagcaagatggaaatgaaaa-----------------------gtaatactcaaagaaggtcaactctaatctgttgtgacataaatagtatcagtggtttcctgggccaagagaatagaatgaggattgactgtgaagaggcagaggggaaattcttatttttgaggcaatcgaaattttttctatcttaattgtgttggaggttacatatacgcatcatttgtcaagacatgtcaaactctgtatttaaaatgaaagcattg-------tactgtatgcacattctccctcaGTAATGTTGATTTAAAAACAATATGG-GAAGATgagataataatgcctatgttgcattactgttgtgagaattcaaggaggtGGCCCTA----TGTGAAAATACCTACCATCTTGCAACTATTTAGTAACTAGCCACAATGATTACTCTTGCTCTGTTCT---TTCTTTTTCTTGTTAGATGTTGTGTCCATTTCAACGTAGCTAATGATATAA s panTro4.chr6 170631535 1126 + 172623881 aaaaCTGTTTTTCCTTTGTCTTCCAACACATCAACAAAAGGACTtatccaggatgggtgaaaaa-aatcacacagcaaaagaataagaagacagaacaaccaacaaagaagagaaaaatttaaacaaatgatttatgagagaagatatataaatggaaaataagcac-atgaaatcaacagcattatttaccaggaaaatgcaaatatgaaagcacaatgagatatcacctcaaaccaaccacaa--tggataatagtaaaaaaccctgacaattctaagtgttggtgtagttataataagcaactaaaattttcattcattcctagtaagaatgtaaattagtgcaaacactttggaaattatgttggcagtttattacaaagtgaaaaatacacctaaaatatgacccagccatggcattcctacatctttaatcaacagaaatgaaagcaagatccatccaaagatgtgtatagaaatacccacatcagctttgttgatatgaggtaaattggaagcagcccaatgcccatcaacagttgaatggataaataaattgtgttggagtaaaagaatggaatactagtcaaaaggatgaacaatatattgatacatagaacaacctcaatacttttggaaatcatcataatgatcaaaagaagcaagatggaaatgaaaa-----------------------gtaatactcaaagaaggtcaactctaatctgttgtgacataaataatatcagtggtttcctgggccaagagaatagaatgaggattgactgtgaagaggcagatgggaaattcttatttttgaggcaatcgaaattttttctatcttaattgtgttggaggttacatatacgcatcatttgtcaagacacgtcaaactctgcatttaaaatgaaagcattg-------tactgtatgcacattctccctcagtaatgttgttttaaaaaCAATATGG-GAAGATgagataataatgcctatgttgcattactgttgtgagaattcaaggaggtGGCCCTA----TGTGAAAATACCTACCATCTTGCAACTATTTAGTAACTAGCCACAATGATTACTCTTGCTCTGTTCT---TTCTTTTTCTTGTTAGATGTTGTGTCCATTTCAACCTAGCTAATGATATAA i panTro4.chr6 I 318 C 0 s ponAbe2.chr6 172382148 1125 + 174210431 AAAGCTGTTTTTCCTTTATCTTCCAACACATCAACAAAACGACTtatccaggatgggtgaaaaa-aatcacacagccaaagaataagaagacagaacaaccaacaaagaagagaaaaatttaaacaaatgatttatgagagaagacatataaatggaaaataagcac-atgaaatcaacagcattatttaccaggaaaatgcaaatatgagagcacaatgagatatcacctcaaaccaaccacaa--tggataata-taaaaaaccctgacaattctaagtgttggtgtagttataataagcaagtaaaattttcattcattcctagtaagaatgtaaattagtgcaaacactttggaaattatgttggcagtttattacaaagtgaaaaatacacctaaaatatgacccagccatggcattcctacatctttaatcaacagaaatgaaagcaagatccatccaaagatgtatatagaaatacccacatcagctttgttgatatgagttaaattggaagcagcccaatgcccatcaacagttgaatggataaataaattgtgttggagttaaagaatggaatactagtcaaaagaatgaacaatatattgatacatagaacaacctcaatacttttggaaatcatcataatgaccaaaagaagcaagatggaaatgaaaa-----------------------gtaatactcaaagaaggtcaactctaatctgttgtgacataaataatatcagtggtttcctgggccaagagaatagaatgaggattgactgtgaagaggcagaggggaaattcttatttttgaggcaatcgaaattttttctatcttaattgtgatggaggttacatatacgcatcatttgtcaagacatgtcaaactctgtatttaaaatgaaagcattg-------tactgtatgcacattctccatcaGTAATGTTGATTTAAAAACAatatgt-gaagatgagataataatgcctatgttgcattactgttgtgagaattggaggaggtggcccta----tgtgaaaatacctaccaTCTTGCAACTATTTAGTAACTAGCCACAATGATTACTCTTGCTTTGTTCT---TTCTTTTTGTTGTTAGATGTTGTGTCCATTTCAACCTAGCTAATGATATAA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156246319 1126 + 157873769 AAAGCTGTTTTTCCTTTGTCTTCCAACACATCAACAAAAGGACTtatccaggatgggtgaaaaa-aatcacacagcaaaagaataagaagacagaacaaccaacaaagaagagaaaaatttaaacaaatgatttgtgagagaagatatataaatggaaaataagcac-atgaaatcaacagcattatttaccaggaaaatgcaaatatgaaagcacaatgagataccagttcaaaccaaccacaa--tggataatagtaaaaaaccctgacaattctaagtgttggtgtagttataataagcaactaaaattttcattcattcctagtaagaatgtaaattagtgcaaacactttggaaattatgttggcagtttattacagagtgaaaaatacacctaaaatatgacccagccatggcatccctacatctttaatcaacagaaatgaaagcaagatccatccaaagatgtgtatagaaatacccacatcagctttgttgatatgagttaaactggaagtagcccaatgcccatcaacagttgaatggataaataaattgtgttggagtcaaagaatggaatactagtcaaaggaatgaacaatatattgatacatagaacaacttcaatacttttggaaatcatcataatgaccaaaagaagcaagatggaaatgaaaa-----------------------gtaacacacaaagaaggtcaactctaatctgttgtgacataaataatatcagtggtttcctgggccaagagaatagaatgaggattgactgtgaagaggcagaggagaaattcttacttttgaggcaatcaatattttttctatcttaattgtgatgggggttacatatacgcatcatttgtcaagacatgtcaaactctgtatttaaaatgaaagcattg-------tactgtacactcattctccatcagtaatactgatttaaaaaCAATATGG-GAAGATGAGATAATAATGCCTATGTTGCATTACTGTTGTGAGAATTCGAGGAGGTGGCCCTA----TGTGAAAATACCTACCATCTTGCAACTATTTAGTAACTAGCCACAACGATTACTCTTGCTCTGTTCT---TTCTTTTTCTTGTTAGATGTTGTGTCCATTTCAACCTAGCTAATGACATAA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168062173 1132 + 169853907 AAAACTGTTTTTCCTTTATCTTCCAACACATCAACAAAAGGACTtatccaggatggttgaaaaa-aatcactcaacaaaagaataagaagacagaacaaccaacaaagaagagaaatatttagacaaatgatttaggagagaagatatataaa------------gt-atgaaatcaacagcattattcaccaggaaaatgcaaatatgaaagcacagtgagatatcacttcaaaccaaccacaaagtggttggt----aaaaaccctgacaattctaagtgttggtgtagttataatgagcaactaaaattttcattcattcctagtaagaatgcaaattagtgcaaacactttggaaattatgctggtagtttattacaaagtgaaaaatacacctacaatatgacccagcaatggcattcctacatctttaatcaatagaaatgaaagcaagatccatccaaagatgtatgtagaaatgcccacatcagctttattgatatgagttaaattggaaacagcccaatgcccaccaacagttaaatggataaataaattgtatgagattcaaagaatggaatactagtcaaaagaatgaacaatatattgatacattgaacaacctcaatacttttggaaatcataataatgaccaaaagaagcaagatgg-aatgaagacacacccataacatttgacttacgtaatactcaaagaaggtcaactccaatctgttgtgacataaataatattagtggtttcctgggccaagaaaatagaatggggattgactgtgaagaggcagaggggaaattcttatttctgaggcaatggaaattttttctatcttaattgtgatggaggttacatatacgcatcatttgtcaagacatgtcaaactct--atttaaaatgaaagcattt-------tattgtatgcacattctccctcagtaatgttgatctaaaaaCAATATGG-AAAGACGAG---ATAATGCCCATGTTGCAATACTGTTGTGAGAAGTCAAGTAGGTGGCCCTA----TGTGAAAATACCTACCATCTTGCAGCTATTTAGTAACTAGCCACAATTATTACTCTTGCTCTGTTCTTCATTCTTTCTCTTGTTAGATGTTGTGTCCATTTCAACCTAGCTGGTGATATAA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169017995 1144 - 170955103 AAAACTGTTTTTCCTTTGTCTTCCAACACATCAACAAAAGAACTtatccaggatggttgaaaaa-aatcactcaacaaaagaataagaagacagaacaaccaacagagaagagaaatatttaaacaaatgatttaggagaaaagatatataaaaggaaaataagcgt-atgaaatcaacagcattattcaccaggaaaatgcaaatatgaaagcacagtgagatatcacttcaaaccaaccacaaagtggttggt----aaaaaccctgacaattctaagtgttggtgtagttataatgagcaactaaaattttcattcattcctagtaagaatgcaaattagtgcaaacactttggaaattatgctggtagtttattacaaagtgaaaaatacacctacaatatgacccagcaatggcattcctacatctttaatcaatagaaatgaaagcaagatccatccaaagatgtatgtagaaatgcccacatcagctttattgatataagttaaattggaaacagcccaatgcccaccaacagttaaatggataaataaattgtatgagattcaaagaatggaatactagtcaaaagaatgaacaatatattgatacattgaacaacctcaatacttttggaaatcataataatgaccaaaagaagcaagatgg-aatgaagacacacccataacatttgacttacgtaatactcaaagaaggtcaactccaatctgttgtgacataaataatattagtggtttcctgggccaagaaaatagaatggggattgactgtgaagaggcagaggggaaattcttatttctgaggcaatggaaattttttctatcttaattgtgatggaggttacatatacgcatcatttgtcaagacatgtcaaactct--atttaaaatgaaagcattt-------tattgtatgcacattctccctcaGTAATGTTGATCTAAAAACAATATGG-AAAGACGAG---ATAATGCCCATGTTGCAATACTGTTGTGAGAAGTCAAGTAGGTGGCCCTA----TGTGAAAATACCTACCATCTTGCAGCTATTTAGTAACTAGCCACAATGATTACTCTTGCTCTGTTCTTCATTCTTTCTCTTGTTAGATGTTGTGTCCATTTCAACCTAGCTGGTGATATAA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163834251 1149 + 165299245 aaaactgtttttcctttgtcttccaaCACATCAACAAAAGGACTTATCCAGGATGGGTGAAAAAGAATCACATAACAAAAGAATAAGAAGACAGAACAACcaacaaagaagagaaatatttaaacaaatgattTAGGAGAGAAGATATATAAGAGGAAAATAAGCGT-ATGAAATCAACAGCATTATTtaccaggaaaatgcaaatatgaaagcacagtgagatatcacttcaaACCAACCACAAAGTGGTTGGT----AAAAACCCTGACAATTCTAAGTGTTAGTGTAGTTATAATGAGCAGCTAAAATTTTCATTCGTTCCTAGTAAGAATGCAAATTAGTGCAAACACTTTGGAAATTATGCTGGCAGTTTATTACAAAGTGAAAAATACACCTACAATATGACCCAGCAATGGCATTCCTACATCTTTAATCAATAGAAATGAACGTAAGATCCATCCAAAGATGTATGTAGAAATGCCCACATCAGCTTTATTGATATGAGTTAAATTGGAAGCAGTCCAATGCCCACCAACAGTTGAAGggataaataaattgtgtgaGATTCAAAGAATGGAATACTAGTCAAAAGAATGAACAATATATTGATACACTGAACAACCTCAATACTTTTGGAAATCATAATAATGACCAAAAGAAGCAAGATGGAAATGAAGACACACCCATAACATTTGACTTATGTAATACTCAAAGAAGGTCAACTCTAATCTGTTGTGACATAAATAATATTAGTGGTTTCCTGGGCCAAGAAAATAGAATGGGGATTGACTGTGAAGAGACAGAGGGGAAATTCTTATTTTTGAGGCAATGGAAATTTTTTCTATCTTAATTGTGATGGAGGTTACATATACGCATCATTTGTCAAGACATGTCAAACTCT--atttaaaatgaatgcattt-------tattgtatgcaCATTCTCCCTCAGTAATGTTGATCTAAAAACAATATGG-AAAGACGAGATAATAATGCCCATGTTGCAATACTGTTGTGAGAAGTCACGTAGGTGGCCCTA----TGTGAAAATACCTGCCATCTTGCAGCTGTTTAGTAACTAGCCACAATGGTTACTCTCGCtctgttcttcattctttctcttgttaGATGCTGTGTCCATTTCAACCTAGCTGGTGATATAA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96614096 1142 + 98384682 AAAACTGTTTTTCCTTTGTCTTCTGACACATCAACAAAAGGACTtatccaggatggttgaaaaa-actcacacaacaaaagaataagaagacagaacaaccaataaagaagagaaatatttaaacaaatgatttaggagagaagatacataaaaggaaaataagcgt-atgaaatcaacagcattatttaccaggaaaatgcaaatatgaaagcacagtgagatatcacttcaaaccaaccacaaagtggttggta---aaaaaccctgacaattctaagtgttggtgtagttataatgagcagctaaaattttcattcattcctagtaagaatgcaaattagtgcaaacac--tggaaattatgctggcagtttattacaaaatgaaaaatacacctacaatatgacccagcaatggcattcctacatctttaatcaatagaaatgaaagtaagatccatccaaagatgtatgtagaaatgcccacatcagctttattgatacaagttaaactggaaacagcccaatgcccaccaacagttaaatgg----ataaattgtgtgagattcaaagaatggaatactagtcaaaagaatgaacaatatattgatacattgaacaacctcaatacttttggaaatcataataatgaccaaaagaagcaagatggaaatgaagacacacccataacatttgacttacgtaatactcaaagaaggtcaactctaatctgttgtgacataaataatattagtggtttcctgggccaagacaatagaatggggattgactgtgaagaggcaga-gggaaattcttatttttgaggcaatggaaattttttctatcttaattgtgatggaggttacatatatacatcacttgtcaagacatgtcaaactct--atttaaaatgaatgcattt-------tattgtatgcacattctccctcaGTAATGTTGATCTAAAAACAATATGG-AAAGATGAGATAATAATGCCCATGTTGTAATACTGTTGTGAGAAGTCAAGTAGGTGGCCCTA----TGTGAAAATACCTACCATTTTGCAGCTATTTAGTAACTAGTCACAATGATGACTCTTGCTCTGTTCTTCATTCTTTCCCTTGTCAGATGTTGTGTCCATTTCAACCTAGCTGGTGATATAA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169820736 1152 + 171630274 AAAACATTTTTGCCTTTGTCTTCCAACGTATTAACAAAAGGACTtatccaggatggggaaaaaa-aatcacacaacaaaacaataagaagacagagcagccaacaaagaggaaaaatagtgaaacaaacgctttatgagagaagatacatagatggaaaacaagcacaatggaatccacagcgttactcaccaggaaaatgcaaatacggag--ccaaggagatatcacttcaaaccacctacaa--tggataacagtgaaaaaccctgacaattctatttgttcgtatagttacaataagcaactacaattttcattcattcctagtaagaatgtaagttggtacaagcactttgaaaattaggttggcagtttattacaaagtgaaaaacacacctagcataggacccaccaatggcatttctagatcttcagtcaatggaaatgagagtgagatccatctaaagatgtgtctacaaatgcccacgtcagctttattgat--gagctaaattggaaacagcccaatgcccac---cagctgaatagataaataaattgtgttggattcacacaacagaataccagtcaaaagagtgaacaatatattaatacacagaacaacctcagtactttcggaaatcataataatggtcaaaagaagcaagatgcagaagaagagacaccaataaaatttgacttacataatactccaagaaggtcagctctaatctgttgtgacataaatcctgtcactggtttcctgggacaagagcata------ggattgactgtgaggccacagagggaaaatccttattttgggggcaatggaaatgttctctatcttaatcgtaatggaggttacatatatgcatcctttgccaaaacatgtcaaactttgtatttaaaatgagtgcatctAAAATACAATAGCATTCACATTCTCCCTCAGTAATGTTGATTTAAAAACAATGTGGAAAAGATGAGCTGAGCATGCCGATGCTGCATGACTATTGTGGGAATTCGAGAAGGCGGCGTGATGCGTGTGACAACACCCACCACCTTGCAACGATTTAGTGACTAGCCGCAGTTGCCACTCTCGCTCTGTTCTTCATTCTTTTTCTTCCTAGACGTTGTGTCCATTTCAGCCTCGTTAGTGACATCA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56112324 3611 + 122678785 I a score=7076584.000000 s hg38.chr6_KB021644v2_alt 17860 2289 + 185823 TCTTGAATAAGACTTTAGTTA----CTCCAGTGAGATATGACTTACTGTGATCCAGTTCCATCTACATGTGGAAGCTTGGACTTTTCCTTCCAACCCACCACCCACTTGGTTTCAAGATCTCCAGCATC-TTCGGAGGGCAAAGCACACTAATGGCATGAGATGTATAAAAAGATTGAATAACCAGATGGAACTGTGTAAAGTCATTTTATAATATACAAATTGGAGGAAACAATTCTTGAAATAAA----TT----GAGCCATTGTTACCGACATGGTTGAAATGTTAATTAAAT------TAATTTGTTAGAGTCAATGGTTCATCCATGAAATTGGCATC--TTCCTGTGCCTGGATGCATGTGTTCTCTAACTTGGT-ATTCCCTTA-ACATTTTATTTGCAAATAATTTTGAAGTTTATTAAGCTGTTTGACAAACACTGCATCTTGAAATAATCATTTCATTGCCAAATTTTGGATGACTGCTTCTTTCTCATTCTAT-ACATTTGTTTCTCTCAGTTTAGC-AACTGACATTGTTCCTCTTCAATAGTCTTTTTTATGATGTTGACCATGGAATTAGCAGTAATGAAATTGCATAAGCACTGGCAAATTAT-ACTTAAATCATAACATTTTAATA---TGTGGAAAGATGGAT----------TCTTCTTTGCATTTTGTTTTCTATTTTCACAAGTTAAACGTTGAATTTAAAAAATGA-GAATAGAATTTTGATAGCAGGTCTCATTCAAAAATTTCTGATTTTTCTACTTCATGCTTATGTTCTTATCTGGCAGCTAGAACAAATCTATTGAACTTACACAAAG--AGATGAAGACTACATAGTCTTTCTTTT-TTCTCT---GTCAGTAAACTGTCAGTGGGCAAAAAGTACTTATGTTATTTTATGGAAGTAATAATTACTGATTTGGTCACTGAAAAATTGACTCAATCCATCACAAATAGCTAATAGGAACAGGTATGCTATTTAAGTCA-TTTGCACTTGTGTGTGTTTGTAAGAACTTACGTATAAAATGTTCCTAGTAGATTTTAAAAATGATATTATTTTAATATGAAATTGGCTAGTGAAGTTCTAGAGAATTAATGTTTACATTTTGACAACCAAATTCCTTATGTACTTTACATGTGTTTACTTAAAAGTCTTACAAAATAGAATTTGCCCTTCTTATGCTTTTTAAATTGAAGGCATGAAAATAATTTGGTCCTTTTCATGGAGATTTGGGATGAATCTGAACACTTATTCTTGCACTGTGCTG-CACCCACATTCTGCTCTCATTTGCTCTTCACGTTTTCAGATCGCTGTTCCTGTCTCTGCACTTGAATTAACTGTAGAGAGTGAGGCAGTCTCCAAAACCTTCCCACCACCCTGTTATTC--TGTTGTTTTTCTGTTTCTGTGATTTGAGAAGTCCTGGAACTAAGCTTTATGCTGAGTCTATGTTACACAACTGTGTGTGGAATGAACTCTCATCAAGACCTCCCGTGAAGGGAGGTGGAGTGCCCCTGGTGGTGGCACGTGG---------------------------------------------------ACTCAGTGGTGTGCCAACTCAAGGGTGCCCAGGTATTTCCCATC-----GTTCAGGGCTGGGTCTCTGCTGGAAGAGTTGAAGTGATGGGAAAGCTGGCTTCCAGAAAAAGAGGGAATTGTAATGTCACGCCATCCACATTCTCCTT-GTTTCTTCTAATCGC-TTGCAGTCCCAGCTCCATGACAAGGTTTGTGACACCAGCGTTTGCTTTAATGTTGAATA-ACATGAAATACTTACAATAGCAAACCTTATGTTATTCTGGCTTACATTACAGTTTCATGTGGCTTTAtatttattcttatttatttaatttatttgatcataaattatcaattgatttTAATATTCTAAATTTCTCTTCCTCCACCCTTCGTTAAATAATTAGTGAACAAGTAAAGGATATGGAAATGTAATGGGTGGTTTACTACCTT-AGAGATATTTCTTTACTCT---GAGTTCCTCATTTATTTTACCAGTTTGA-TCTTAACACACTGAGG-TTTTTTAAAGGAATATAACTTTAATCCTAAATGCTTTCTG-TAATATTAGG----TAGCAGAAATAAAGACCTA-tgtttatgtgtgtatgtgtatatgtgtgtgtatctgtgtgtgtatctCACACTTGTTTGGCCTTTCCTATATTTGTTTTAGGGAATTTTCTTTCTTCTGACTTTTATTGCCTTTGCTGACTTCTTCCTTTTCAGGTTAATATAA--TGTACAAAATGCAGAGTAACCAAGTTCAAGTGTATATAACAATTTATTGCATCATTTAAAAAGTATAATAATCTACAATTGATAAGAA s panTro4.chr6 170632661 2289 + 172623881 TCTTGAATAAGACTTTAGTTA----CTCCAGTGAGATATGACTTACTGTGATCCAGTTCCATCTACATGTGGAAGCTTGGACTTTTCCTTCCAACCCACCACCCACTTGGTTTCAAGATCTCCAGCATC-TTCGGAGGGCAAAGCACACTAATGGCATGAGATGTATAAAAAGATTGAATAACCAGATGGAACTGTGTAAAGTCATTTTATAATATACAAATTGGAGGAAACAATTCTTGAAATAAA----TT----GAGCCATTGTTACCGACATGGTTGAAATGTTAATTAAAT------TAATTTGTTAGAGTCAACGGTTCATCCATGAAATTGGCATC--TTCCTGTGCCTGGATGCATGTGTTCTCTAACTTGGT-ATTCCCTTA-ACATTTTATTTGCAAATAATTTTGAAGTTTATTAAGCTGTTTGACAAACACTGCATCTTGAAATAATCATTTCATTGCCAAATTTTGGATGACTGCTTCTTTCTCATTCTAT-ACATTTGCTTCTCTCAGTTTAGC-AACTGACATTGTTCCTCTTCAATAGTCTTTTTTATGATGTTGACCATGGAATTAGCAGTAATGAAATTGCATAAGCACTGGCAAATTAT-ACTTAAATCATAACATTTTAATA---TGTGGAAAGATGGAT----------TCTGCTTTGCATTTTGTTTTCTATTTTCACAAGTTAAACGTTGAATTTAAAAAATGA-GAATAGAATTTTGACAGCAGGTCTCATTCAAAAATTTCTGATCTTTCTACTTCATGCTTATGTTCTTATCTGGCAGCTAGAACAAATCTATTGAACTTACACAAAG--AGATGAAGACTACATAGTCTTTCTTTT-TTCTCT---GTCGGTAAACTGTCAGTGGGCAAAAAGTACTTATGTTATTTTATGGAAGTAATAATTACTGATTTGGTCACTGAAAAATCGACTCAATCCATCACAAATAGCTAATAGGAAGAGGTATGCTATTTAAGTCA-TTTGCACTTGTGTGTGTTTGTAAGAACTTACGTATAAAATGTTCCTAGTAGATTTTAAAAATGATATTATTTTAATATGAAATTGGCTAATGAAGTTCTAGAGAATTAATGTTTACATTTTGACAACCAAATTCCTTATGTACTTTACATGTGTTTACTTAAAAGTCTTACAAAATAGAATTTGCCCTTCTTATGCTTTTTAAATTGAAGGCATGAAAATAATTTGGTCCTTTTCATGGAGATTTGGGATGAATCTGAACGCTTATTCTTGCACTGTGCTG-CACCCACATTCTGCTCTCATTTGCTCTTCACGTTTTCAGATCCCAGTTCCTGTCTCTGCACTTGAATTAACTGTAGAGAGTGAGGCAGTCTCCAAAACCTTCCCACCACCCTGTTATTC--TGTTGTTTTTCTGTTTCTGTGATTTGAGAAGTCCTGGAACTAAGCTTTATGCTGAGTCTATGTTACACAACTGTGTGTGGAATGAACTCTCATCAAGACCTCCCGTGAAGGGAGGTGGAGTGCCCCTGGTGGTGGCACACGG---------------------------------------------------ACTCAGTGGTGTGCCCACTCAAGGGTGCCCAGGTATTTCCCATC-----GTTCAGGGCTGGGTCTCTGCTGGAAGAGTTGAAGTGATGGGAAAGCTGGCTTCCAGAAAAAGAGGGAATTGTAATGTCACGCCATCCACATTCTCCTT-GTTTCTTCTAATCGC-TTGCAGTCCCAGCTCCATGACAAGGTTTGTGACACCAGCGTTTGCTTTAATGTTGAATA-ACATGAAATACTTACAATAGCAAACCTTATGTTATTCTGGCTTACATTACAGTTTCATGTGGCTTCatatttattattatttatttaatttatttgatcataaattatcaattgattttaatattctaaatttCTCTTCCTCCACCCTTCGTTAAATAATTAGTGAACAAGTAAAGGATATGGAAATGTAATGGGTGGTTTACTACCTT-ATAGATATTTCTTTACTCT---GAGTTCCTCATTTATTTTACCAGTTTGA-TCTTAACACACTGAGG-TTTTTTAAAGGAATATAACTTTAATCCTAAATGCTTTCTG-TAATATTAGG----TAGCAGAAATAAAGACCTA-TGTTTAtgtgtgtgtgtgtatatgtgtgtgtatctgtgtgtgtatctCACACTTGTTTGGCCTTTCCTATATTTGTTTTAGGGAATTTTCTTTCTTCTGACTTTTATTGCCTTTGCTGACTTCTTCCTTTTCAGGTTAATATAA--TGTACAAAATGCAGAGTAACCAAGTTCAAGTGTATATAACAATTTATTGCATCATTTAAAAAGTGTAATAATCTACAATTGATAAGAA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172383273 2267 + 174210431 TCTTGAACAAGACTTTAGTTA----CTCCAGTGAGATATGACTTACTGTGATCCAGTTCCATCTACATGTGGAAGCTTGGACTTTTCCTTCCAACCCACCACCCACTTGGTTTCAAGATCTCCAGTATC-TTCGGAGGGCAAAGCACACTAATGGCATGAGATGTATAAAAAGATTGAATAACCAGATGGAACTGTGTAAAGTCATTTTATAATATACAAATTGGAGGAAACAATTCTTGAAATAAA----TT----GAGCGATTGTTACCGACATGGTTGAAGTTTTAACTAAAT------TAATTTCTTAGAGTCAATAGTTCATCCATGAAATTGGCGTC--TTTCTATGACTGTATGCACGTGTTCTCTAACTTGGT-ATTCCCTTA-ACATTTTATTTGCAAATAATTTTGAAGTTTATTGAGCTCTTTGACAAACACTACATCTTGAAATAATCATTTCATTGTCAAATTTTGGATGACTGCTTCTTTCTCATTCTAT-ACATTTGTTTCTCTCAGTTTAGCTGACTGACATTGTTTCTCTTCAATAGTCTTTTCTATGATGTTGACCATGGAATTAGCAGTAATGAAATTACATAAGCACTGGCAAATTAT-ACCTAAATCATAACATTTTAATA---TGTGGAAAGATGGA-----------TCTGCTTTGCATTTTGTTTTCTATT--------TTAAATGTTGAATTTAAAAAATGA-GAATAGAATTTTGACAGCGGGTCTCATTCAAAAATTTCTGA-CTTTCTACTTCATGGTTATGTTCTTATCTGGCAGCTAGAACAAATCCATTGAACTTACACAAAG--AGATGAAGACTACATGGTCTTTCTTTT-TTCTCT---ATTGGTAAACTGTCAGTGGGCAAAAAGTACTTCTGTTATTTTATGGAAGTAATAATTACTGATTTGGTCACCAAAAAATCGACTCAATCCATCATAAATAGCTAATAGGAACAGGTATGCTATTTAAGTCA-TTTGCACTTGTGTGTGTTTGTAAGAACTTACGTATAAAATGTTCCTAGTAGATTTCAAAACTGATATTATTTTAATATGAAATTGGCTAATGAAGTTCTGGAGAATTAATATTTACATTTTGACGACCAAATTCCTTATGTACTTTACATGTGTTTACTTAAAAGTCTTACAAAATAGAATTTGCCCTTCTTATCCTTTTTAAATTGAAGGCATGAAAATAATTTGGTCCTTTTCATGGAGATTTGGGATGAATCTGAACGCTTATTCTTGCACTGAGCTG-CAACTGCATTCTGCTCTCATTTGCTCTTCACGTTTTCAGATCCCTGTTCCTCTCTCTGCACTTGAATTAACTGTAGAGAGTGAGACAGTCTCCAAAACCTTCCCACCACCCTGTTATTC--TGTTGCTTTTCTGTTTCTGTGATTTGAGAAGTCCTGGAACTAAGCTTTATGCTGAGTCTATGTTACACAACTGTGCGTGGAATGAACTCTCATCAAGACCTCCCGTGAA---------------CCTGGAGGTGGCACGCGG---------------------------------------------------ACTCAGTGGTGTGCCAACTCAAGGGTGCCCAGGTATTTCCCATT-----GTTCAGGGCTGGGTCTCTGCTGGAAGAGTTGAAGTGATGGGAAAGCTGGCTTCCAGAAAAAGAGGGAATTGTAATGTCACGCCATCCACATTCTCCTT-GTTTCTTCTAATCGC-TTGCAGTCCCAGCTCCATGACAAGGTTTGTGACACCAGCGTTTGCTTTAATGTTGAATA-ACA-GAAATACTTAAAATAGAAAACCTTATGTTATTCTGGCTTACATTACAGTTTCATGTGGCtttatatttattcttatttatttaatttatttgatcataaattatcaattgattttaatattctaaatttCTCTTCCTCCACCCTTCGTTAAATAATTAGTGAACAAGTAAAGGATATGGAAATGTAATGGGTGGTTTACTACCTTAATAGATATTTCTTTACTCT---GAGTTCCTCATTTATTTTACCAGTTTGA-TTTTAACACACTGAGG-TTTTTTTAAGGAATATAACTTTAATCCTAAATGCTTTCTGTTAATATTAGG----TAGCAGAAATAAAGACCTATTTTTTAtgtgtgtgtgcgtatatgtgtgtgtgtctgtgtgGGTATCTCACACTTGTTTGGCCTTTCCTATATTTGTTTTAGGGAATTTTCTTTCTTCTGACTTTTATTGCCTTTGCTGACTTCTTCCTTTTCAGATTAATATAA--TGTACAAAATGCAGAGTAACCAAGTTCAAGTGTATATAACAATTTATTGCATCATTTAAAAAGTGTAATAATCTACAATTGATAATAA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156247445 2256 + 157873769 TCTTGAATAAGACTTGAGTTA----CTCCAGTGAGATATGACTCACTGTGATCCAGTTCCATCTACATGTGGAAGCTTGGACTTTTCCTTCCAACCCACCACCCACTTGGTTTCAAGATCTCCAGCATC-TTCGGAGGGCAAAGCACACTAATAGCATGAGATGTATAAAAAGATTGAATAACCAGATGGAACTGTGTAAAGTCATTTTATAATACACAAATTGGAGGAAACAATTCTTGAAATAAA----TT----GAGCCATTGTTACCGACATAGCTGAAATTTTAACTAAA-----------TTGTTAGAGTCAATGGTTCATCCATGAAATTGGCATC--TTCCTATGCCCGTATGCACGTGTTCTCCAACTTGGT-ATTCCCTTA-ACATTTTATTTGCAAATAATTTTGAAGTTTATTAAGCTCTTTGACAAACACTACATCTTGAAATAATCATTTCATTGCCAAATTTTGGATGACTGCTTCTTTCTCATTCTAT-ACATTTGTTTCTCTCAGTTTAGCTGACTGACGTTGTTTCTCTTCAATGGTCTTTTTTATGATGTTGACCATGGAATTAGCAGTAATGAAATTACATAAGCACTGGCAAATTAT-ACTTAAATCATAACATTTTACAA---TGTGGAAAGATGGAT----------TCTGCTTTGCATTTTGTTTTCTATTTTCACAAGTTAAACGTTGAATTTAAAAAATGA-GAATAGAATTTTGACAGCAGGTCTCATTCAAAAATTTCTGT-CTTTCTACTTCATGGTTATGTTCTTATCTGGCAGCTAGAACAGATCTATTGAACTTACACAAAG--AGATGAAGAATATATAGTCTTTCTTTT-TTCTCTGTCGTCGGTAAACTGTCAGTGGGCAAAAAGTACTTCTGTTATTTTATGGAAGTAACAATTACTGATTTGGTCACTAAAAAATCGACTCCATCCATCAAAAATAGCTAATGGGAACAGGTATGCTATTTAAGTCA-TTTGCACTTGTGTGTGTTTGTAAGAACTGACGTATAAAATGTTCCTAGTAGATTTCAAAAATGATATTATTTTAATATGAAATTGGCTAATGAAGTTCTAGAGAATTAATATTTACATTTTGACGACCAAATTCCTTATGTACTTTACATGTGTTTACTTAAAAGTCTTACAAAATAGAATTTGCCCTTCTTATGCTTTTTAAATTGAAGGCATGAAAATAATTTGGTCCTTTTCATGGAGATTTGGGATGAATCTGCACGCTTATTCTTGCACTGTGCTG-CACCCACATTCTGCTCTCATTTGCTCTTCATGTTTTCAGATCCTTGTTCCTGTCTCTGCACTTGAATTAACCATAGAGAGTGAGGCAGTCACCAAAACCTTCCCACCACCCTGTTTTTC--TGTTGCTTTTCTGTTTCTGTGATTTGAGAAGTCCTGGAACTAAGCTTTATGCTGAGTCTATGTTACACAACTGTGTGTGGAATGAACTCTCATCAAGACCTCCCGTGAA---------------CCTGGAGGTGGCACGCGG---------------------------------------------------AGTCAGTGGTGTGCCAACTCAAGGGTGCCCAGGTATTTCCCATC-----GTTCAGGGCTGGGTCTCTGCTGGAAGAGTTGAAGTGATGGGAAAGCTGGCTTCCAGAAAAAGAGGGAATTGTAATGTCACGCCATCCACATTCTCCTT-GTTTCTTCTAAGCGC-TCGCAGTCCCAGCTCCATGACAAGGTTTGTGACACCAGAGTTTGCTTTAATGTTGAATA-ACATGAAATACTTAAAATAGCAAACCTTATGTTATTCTGGCTTACATTACAGTTTCATATGGCTTTAtatttattcttatttatttaatttatttgatcataagttatcaattgatttTAATATTCTAAATTTCTCTTCCTCCACCCTTCGTTAAATAATTAGTGAACAAGTAAAGGATATAGAAATGTAATGGGTGGTTTACTACCTT-ATAGATATTTCTTTACTCT---GAGTTCCTCATTTATTTTACCAGTTTGA-TTTTAACACACTGAGGTTTTTTTTAAGGAATATAAGTTTAATCCTAAATGCTTTCTG-TAATATTAGG----TAGCAGAAATAAAGACCTA-TTTTTAtgtg------------tgtgtgtgtgtctgtgtgtgtATCTCACACTTGTTTGGCCTTTCCTATATTTGTTTTAGGGAATTTTCTTTCTTCTGACTTTTATTGCCTTTGCTGACTTCTTCTTTTTCAAGTTAATA-------TACAAAATGCAGAGTAACCAAGTTCAAGTGTATATAACAATTTATTGCATCGTTTAAAAAGTGCAATAATCTATAATTGATAATAA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168063305 2270 + 169853907 TCTTGAGCAAGACTTTAGTTA----CTCCAGTGAGATATGACTTGCTGTGATCCAGTTCCATCTACATGTGGAAGCTTGGGCTTTTCCTTCCAA-CCACCACCCACTTGGTTTCAAGATCTCCAGCATC-TTCGGAGGGCAAAGCACACTAACAGCATAAGATGTAGAAAAAGATTGAATAACCAGATGGAACTGTGTAAAGTCATTTTATAATATACAAACTGGAGGAAACAATTCTTGAAATAAA----TT----GAGCCATTGTTACTGACATGGTTGAAATTTTAACTGAATGAAAGATAATTTGTTAGAGTCAATGGTTCATCCATGAAATTGGCATC--TTTCTATGCCCGTATGCACGTGTTCTCTAACTTGGT-ACTCCCTTA-ACATTTTATTTGCAAATAATTTTGAAGTTTATTAGGCTCTTTGACAAACACTACATCTTGAAATAATCATTTCATTGCCAAATTTTGGATGACTGCTTCTTTCTCATTCTAT-ACATTTTTCTCTCTTAGTTTAGCTGACTGACATTGTTTCTCTTCAATAGTCTTTTTTATGATGTTGACTGTGGAATTAACAGTAATGAAATTACATAAGCACTGACAAATTAT-ACTTAAATCATAACATTTTAATA---TGTGGAGAGATGGAT----------TCTGCTTGGCATTTTGTTTTCTATTTTCACAAGTTAAATGCTGAATT-AAAAAATGA-GAATAGAATTTTGACAGCAGGTCTCATTCAAAAATTTCTGATTTTTCTACTTGGTGGTTATGTTTTTATCTGGCAGCTAGAACAAATCTATTGAACTTACACAAAG--AGATGAAGACTACATAGTCTTTCTTTT-TTCTCTGTCATCGGTAAACTGTCAGTCGGCAAAAAGTACTTCTGTTATTTTATGGAAGTAATAATTACTGATTTGGTCACTGAAAAATCAACTCTATCCATCATAAATAGCTAATGGGAACAGGTATGCGATTTAAGTCA-TTTGCACTTGTGTGTGTTTGTAACAACTTATGTATAAAATGTTCCTACTAGAGTTCAAAAATGATATTATTTTAATGTGAAATTGGCTAGTGAAGTTCTAGAGAATTAATATTTACATTTTGACAACCAAATTCCTTATGTACTTTACATGTGTTTACTTAAAAGCATTACAAAATAGAATTTGCCCTTCTTATGCTTTTTAAATTGAAGGCATGAAAATAATTTGGTCCCTTTCATGGAGATTTGGCATGAATCTGAATCCTTATTCTTGTGCTGTGCTG-CACCCACATTCTGCTCCCATTTGCTCTTCACGTTTTCAGATCCCTGTTCCTGTCTCTTCACTTGAATTAACTGTAGAGAGTGAGACAGTCTCCAAAACCTTCCCACCACCCTGTTATTC--TGTTGCTTTTCTGTTTCTGTGATTTGAGAAGTCCTCGAACTAAGCTACGTGCTGAGTCTATGTTACACAACTGTGTGTGGGATGAACTCTCATCAAGACCTCCCGTGGG---------------CCTGGAGGTGGCAAGCGG---------------------------------------------------ACTCAGTGTTGTGCCAACTCAAGGGTGCCCAGGTGTTTCCCATC-----GTTCAGGGCTGGATCTCTGCTGGAAGAGTTGAAGTGATGGGAAAGCTGGCTTCCAGAAGAAGAAGAAATTCTAGTGTCACACCATCCGTATTCTCCTT-GTTTCTTCTAATCGC-TCACTGTCCCAGCTCCATGACAAGGTTTGTGACACCAGTGTTTGCTTTAATGTGGAATA-ACATGAAATACTTAACATAGCAAACCTTACGTTATTCTGGCTTACATTACAGTTTCATGTGACtttatatttattc----ttatttaatttatttgatcataaattatcaattaattttaaCATTCTAAATTTCTCTTTCTCCATCCTTCGTTAAATAATTACTGAACAAGTAAAGGATATAGAAATGTAATGGATGGTTTACTACTTT-ATAGATATTTCTTTACTCT---GAGTTCCTCGTTTATTTTGCCAGTTTGA-TTTTAACACATTGAGG-TTTTCTCAAGGAATATAACTTCAATTCTAAATGCTTTCTG-TAATATTAGG----TAGCAGAAATAAAGACCTA-TTTTTAtgtgtgtgtg------tgtgtgtatgtatgtgtgtgtgtgtCGCACCTGTTTGGCCTTTCCTATATTTATTTTAGGGAATTTTCTTTCTTCTGACTTTTATTGTCTTTGCCGACTTCTTC-TTTTCAGGTTAATATAA--TGTATAAAATGCAGAGTAACCAAGTTCAAGTGTATATAACAATTTATTGTATCA-TTAAAAAGGGCAATAATCTACAATTGATAATAA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169019139 2269 - 170955103 TCTTGAGCAAGACTTTAGTTA----CTCCAGTGAGATATGACTTGCTGTGATCCAGTTCCATCTACATGTGGAAGCTTGGGCTTTTCCTTCCAA-CCACCACCCACTTGGTTTCAAGATCTCCAGCATC-TTCGGAGGGCAAAGCACACTAACAGCATAAGATGTAGAAAAAGATTGAATAACCAGATGGAACTGTGTAAAGTCATTTTATAATATACAAACTGGAGGAAACAATTCTTGAAATAAA----TT----GAGCCATTGTTACTGACATGGTTGAAATTTTAACTGAATGAAAGATAATTTGTTAGAGTCAATGGTTCATCCATGAAATTGGCATC--TTTCTATGCCCGTATGCACGTGTTCTCTAACTTGGT-ACTCCCTTA-ACATTTTATTTGCAAATAATTTTGAAGTTTATTAGGCTCTTTGACAAACACTACATCTTGAAATAATCATTTCATTGCCAAATTTTGGATGACTGCTTCTTTCTCATTCTAT-ACATTTTTCTCTCTTAGTTTAGCTGACTGACATTGTTTCTCTTCAATAGTCTTTTTTATGATGTTGACTGTGGAATTAACAGTAATGAAATTACATAAGCACTGACAAATTAT-ACTTAAATCATAACATTTTAATA---TGTGGAGAGATGGAT----------TCTGCTTGGCATTTTGTTTTCTATTTTCACAAGTTAAATGCTGAATTAAAAAAATGA-GAATAGAATTTTGACAGCAGGTCTCATTCAAAAATTTCTGATTTTTCTACTTGGTGGTTATGTTTTTATCTGGCAGCTAGAACAAATCTATTGAACTTACACAAAG--AGATGAAGACTACATAGTCTTTCTTTT-TTCTCTGTCATCGGTAAACTGTCAGTCGGCAAAAAGTACTTCTGTTATTTTATGGAAGTAATAATTACTGATTTGGTCACTGAAAAATCAACTCTATCCATCATAAATAGCTAATGGGAACAGGTATGCGATTTAAGTCA-TTTGCACTTGTGTGTGTTTGTAACAACTTATGTATAAAATGTTCCTACTAGAGTTCAAAAATGATATTATTTTAATGTGAAATTGGCTAATGAAGTTCTAGAGAATTAATATTTACATTTTGACAACCAAATTCCTTATGTACTTTACATGTGTTTACTTAAAAGCATTACAAAATAGAATTTGCCCTTCTTATGCTTTTTAAATTGAAGGCATGAAAATAATTTGGTCCCTTTCATGGAGATTTGGCATGAATCTGAATCCTTATTCTTGTGCTGTGCTG-CACCCACATTCTGCTCCCATTTGCTCTTCACGTTTTCAGATCCCTGTTCCTGTCTCTTCACTTGAATTAACTGTAGAGAGTGAGACAGTCTCCAAAACCTTCCCACCACCCTGTTATTC--TGTTGCTTTTCTGTTTCTGTGATTTGAGAAGTCCTCGAACTAAGCTACGTGCTGAGTCTATGTTACACAACTGTGTGTGGGATGAACTCTCATCAAGACCTCCCGTGGG---------------CCTGGAGGTGGCACGCGG---------------------------------------------------ACTCAGTGTTGTGCCAACTCAAGGGTGCCCAGGTGTTTCCCATC-----GTTCAGGGCTGGATCTCTGCTGGAAGAGTTGAAGTGATGGGAAAGCTGGCTTCCAGAAGAAGAAGGAATTCTAGTGTCACACCATCCGTATTCTCCTT-GTTTCTTCTAATCGC-TCGCTGTCCCAGCTCCATGACAAGGTTTGTGACACCAGTGTTTGCTTTAATGTGGAATA-ACATGAAATACTTAAAATAGCAAACCTTACGTTATTCTGGCTTACATTACAGTTTCATGTGGCTTTATATTTATTC----TTATTTAATTTATTTGATCATAAATTATCAATTAATTTTAACATTCTAAATTTCTCTTTCTCCATCCTTCGTTAAATAATTACTGAACAAGTAAAGGATATAGAAATGTAATGGATGGTTTACTACTTT-ATAGATATTTCTTTACTCT---GAGTTCCTCGTTTATTTTGCCAGTTTGA-TTTTAACACATTGAGG-TTTTCTCAAGGAATATAACTTCAATCCTAAATGCTTTCTG-TAATATTAGG----TAGCAGAAATAAAGACCTA-TTTTTA--tgtgtgtg------tgtgtgtatgtatgtgtgtgtgtgtCACACCTGTTTGGCCTTTCCTATATTTATTTTAGGGAATTTTCTTTCTTCTGACTTTTATTGTCTTTGCCGACTTCTTC-TTTTCAGGTTAATATAA--TGTATAAAATGCAGAGTAACCAAGTTCAAGTGTATATAACAATTTATTGTATCA-TTAAAAAGGGCAATAATCTACAATTGATAATAA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163835400 2271 + 165299245 TCTTGAGCAAGACTTTAGTTA----CTGCAGTGAGATATGACTTGCTGTGATCCAGTTCCATCTACATGTGGAAGCTTGGGCTTTTCCTTCCAA-CCACCACCCACTTGGTTTCAAGATCTCCAGCATC-TTCAGAGGGCAAAGCACACTAATGGCATAAGATGTAGAAAAAGATTGAATAACCAGATGGAACTGTGTAAAGTCattttataatatacaaattGGAGGAAACAATTCTTGAAATAAA----TT----GAGCCATTGTTACTGACATGGTTGAAATTTTAACTGAATTAAAGATAATTTGTTACAGTCAATGGTTCATCCATGAAATTGGCATC--TTTCTATGCCCGTATGCACGTGTTCTCTAACTTGGT-ACTccctta-acattttatttgcaaataattttgaaGTTTATTAGGCTCTTTGACAAACACTACATCTTGAAATAATCATTTCATTGCCAAATTTTGGATGactgcttctttctcattctat-ATATTTGTCTCTCTTAGTTTAGCTGACTGACATTGTTTCTCTTCAATAGTCTTTtttatgatgttgactgtggaaTTAACAGTAATGAAATTACATAAGCACTGACAAATTAT-ACTTAAATCATAACATTTTAATA---TGTGGAGAGATGGAT----------TCtgctttgcattttgttttctattttcacaaGTTAaatgctgaatttaaaaaatga-gaatagaaTTTTGACAGCAGGTCTCATTcaaaaatttctgatttttctacttGGCGGTTATGTTTTTATCTGGCAGCTAGAACAAATCTATTGAACTTACAAAAAG--AGATGAAGACTAcatagtctttctttt-ttctctgtcatcGGTAAACTGTCAGTCGGCAAAAAGTACTTCTGTTATTTTATGGAAGTAATAATTACTGATTTGgtcactgaaaaatcaactctaTCCATCATAAATAGCTAATGGGAACAGGTATGTGATTTAAGTCA-TTTGcacttgtgtgtgtttgtaacaACTTATGTATAAAATGTTCCTACTAGAGTtcaaaaatgatattattttaatgtgaaaTTGGCTAATGAAGTTCTAGagaattaatatttacattttgacaaCCAAATTCCTTATGTACTTTACATGTGTTTACTTAAAAGCATTACAAAATAGAATTTGCCCttcttatgctttttaaattgaaGGCATGAAAATAATTTGGTCCCTTTCATGGAGATTTGGCATGAATCTGAATCCTTATTCTTGTGCTGTGCTG-CACCCACATTCTGCTCCCATTTGCTCTTCACGTTTTCAGATCCCTGTTCCTGTCTCTTCACTTGAATTAACCATAGAGAGTGAGACAGTCTCCAAAACCTTCCCACCACCCTGTTattc--tgttgcttttctttttctgtgatttGAGAAGTCCTTGAACTAAGCTACGTGCTGAGTCTGTGTTACACAACTGTGTGTGGAATGAACTCTCATCAAGACCTCCCGTGGG---------------CCTGGAGGTGGCACGCGG---------------------------------------------------ACTCAGTGTTGTGCCAACTCAAGGGTGCCCAGGTGTTTCCCATC-----GTTCAGGGCTGGGTCTCTGCTGGAAGAGTTGAAGTGATGGGAAAGCTGGCTTCCAGAAGAAGAAGGAATTCTAGTGTCACACCATCCGTATTCTCCTT-GTTTCTTCTAATCGC-TCACGGTCCCAGCTCCATGACAAGGTTTGTGACACCAGCGTTTGCTTTAATGTGGAATA-ACATGAAATACTTAAAATAGCAAACCTTACGTTATTCTGGCTTACATTACAGTTTCATGTGgctttatatttattc----ttatttaatttatttgatcaTAAATTGTCAATTAATTTTAACattctaaatttctctttctccattcttCGTTAAATAATTACTGAACAAGTAAAGGATATAGAAATGTAATGGATGGTTTACTACTTT-ATAGATATTTCTTTACTCT---GAGTTCCTCGTTTATTTTGCCAGTTTGA-TTTTAACACATTGAGG-TTTTCTCAAGGAATATAACTTCAATCCTAAATGCTTTCTG-TAATATTAGG----TAGCAGAAATGAAGAccta-tttttatgtgtgtgtg------tgtgtatgtgtgtgtgtgtgtgtgtcacaccTGTTTGACCTTTCCTATGtttattttagggaattttctttcttctgacttttattgtctttgccgacttcttc-ttttcAGgttaatataa--tgtataaaatgcAGAGTAACCAAGTTCAAGTGTatataacaatttattgtatCA-TTTAAAAGGGCAATAATCTACAATTGATAATAA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96615238 2262 + 98384682 TCTCGAGCAAGACCTTGGTTA----CTCCAGTGAGATATGACTGGCTGTGATCCAGTTCCATCTACATGTGGAAGCCTGGGATTTTCCTTCCAA-CCACCACCCACTTGGTTTCAAGATCTCCAGCATC-TTCGGAGGGCAAAGCACACTAACGGCATAAGATGTAGAAAAAGATTGAATAACCAGAAGGAACTGTGTAAAGTCATTTTATAATCTACAAATTGGAGGAAACAATTCTTGAAATAAA----TT----GAGCTGTTGTTACTGACATGGTTGAAATTTTAACTAAATTAAAGATAATTTGTTACAGTCAATGGTTCATCCATGAAATTGGCATC--TTTCTATGCCCGTATGCCCGTGTTCTCTAACGTGGT-ACTCCCTTA-ACATTTTATTTGCAAATAATTTTGAAGTTTATTAAGCTCTTTGACAAACACTACATCTTGAAATAATCATTTTGTTGCCAAATTTTGGATGACTGCTTCTTTCTCATTCTAT-ACATTTGTCTCTCTTAGTTTAGCTGACTGACATTGTTTCTCTTCAATAGTCTTTTTTATGATGTTGACCGTGGAATTAACACTAATGAAATTACATAAGCACTGACAAATTAT-ACTTAAATCATAACATTTTAATA---TGTGGAGAGATGGAT----------TCTGCTTTGCATTTTGTTTTCTATTTTCACAAGTTAAATGCTGAATTAAAAAAATGA-GAATAGAATTTTGACAGCAGGTCTCATTTAAAAATTTCTGATCTTTCTACTTCGTGGTTATGTTTTTATCTGGCAGCTAGAACAAATCTATTGAACTTACACAAAG--AGATGAATACTACATAGTCTTTCTTTT-ATCTCTGTCATTGGTAACCTGTCAGTCGGCAAAAAGTACTTCTGTTATTTTATGGAAGTAATAATTACTGATTTGGTTACTGAAAAATCAGCTCCATCCGTCATAAATAGCTAATGGGAACAGGTATGCGATTTAAGTCA-TTTGCACTTGTGTGTGTTTGTAAGAACCTATGTATAAAATGTTCCTACTAGATTTCAAAAATGATATTATTTTAATACAAAATTGGCTAATGAAGTTCTAGAGAATTAATATTTACATTTTGACAACCAAATTCCTTATGTACTTTACATGTGTTTACTTAAAAGCATTACAAAATAGAATTTGCC---CTTATGCTTTTTAAATTGAAGTCATGAAAATAATTTGGTCCTTTTCATGGAGATTTGGCATGAATCTGAATCCTTATTCTTGTGCTGTGCTG-CACCCACATTCTGCTCCCATTTGCTCTTCACGTTTTCAGATCCCTGTTCCTGTCTCTTCACTTGAATTAACTGTAGAGAGTGAGACAGTCTCCAAAACCTTCCCACCACCCTGTTATTC--CGTTGCTTTTCTGTTTCTGTGATTTGAGAAGTCCTTGAACTAAGCTACGTGCTGCGTCTATGTTACACAACTGTGTGTGGAATGAACTCTCATCACGACCTCCCATGGG---------------CCTGGAGGTGGCACGCGG---------------------------------------------------ACTCAGTGTTGTGCCAACTCAAGGGTGCCCAGGTGTTTCCCATA-----GTTCAGGGCTGGGTCTCTGCTGGAAGAGGTGAAGTGATGGGAAAGCTGGCTTCTAGAAAAAGAAGGAATCGTAGTGTCACACCATCCGTATTCTGCTT-GTTTCTTCTAATCAC-TCACGGTCCCAGCTCCATGGCAAGGTTTGTGACACCAGTGTTTGCTTTAATGTGGAACA-ACATGAAATTCTTAAAATAGCAAACCTGGCGTTATTCTGGCTTACATTACAGTTTCATGTGGTTTTATATTTATTC----TTATTTAATTTATTTGATCATAAATTACCAATTAATTTTAACATTCTAAATTTCTCTTTCTCTATCCTTCGTTAAATAATTAGGGAACAAGTAACGGATATAGAAATGTTACGGATGGTTTACTACCTT-ATAGATATTTCTTTACTCT---GAGTTCCTCGTTTATTTTGCCAGCTTGA-TTTTAACACATTGAGG-TTTTCTCAAGGAATATAACTTCAATCCTAAATGCTTTCTG-TAATATTAGG----TAGCAGAAATAAAGACCTA-TTTTTAAgtgtgtgtg------tgtg--------tgtgtgtgtgtCTCACACCTGTTTGACCTTTCCTATATTTGTTTTAGGGAGTTTTATTTCTTCTGACTTTTATTGTTTTTGCTGACTTCTTC-TTTTCAGGTTAATATAATGTGTATAAAATGCAGAGTAACCAAGTTCAAGTGTATATAACAATTTATTGTATCA-TTAAAAAGGGCAATAATCTACAATTGATAATAA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169821888 2255 + 171630274 CCTTGAACAAGACTTTCGTGA----CTCCGGTGAGATATGACTTTCTGTGGTCCAGTTCCATCTACGTGTGGAAGCCCGGGACTTTCCCTCCAGCCCACTA--CACTTGGTTTCGAGATCTCCAGCCTC-TTCGGAGGGCAAAGCACACTAGTGGCATGACAGGTATAAAAAGATGGAACAACCAGATGGAACTGTGTAAAGTCATTTTACAATACACAAATTGGAGGAAACAATTATCGAAATAAATTGCTT----GAGCCATTGTTACTGAGATGGTTGAGGCGTTAACCAAATTAAAGATAATTTGTTAGACTTAATGGTACATCCGTGAAATTGGCATCCTTTCCTGTGCCTGCATGCACGTGTTCTCTAACTGGGT-ATTCCCCTA-ACGTTTTATTTGCAAATAATTTTGAAGTTTATTAAGCTCCCTGACAAACACTACATCTTGAAATAATCATCCGATTGCCAAATTTTGGATGACTGCTTCTTTCTCATTCTAT-ACATTTG----TCTCAGTGTAGTTGACTGACATTGCTTCTCTTCAGTCGTCTCCTTTATGATGTTGACTGTGGAATTAACCGTAATGAAATTACGTAAGCACTGGA------------AAATCATAACATTTTAATA---TGTGGAAAAATGGAT----------CGTGCTGTGCATTTTGCTTTCTATTTTCACAGGTTAAACATTGAATTAAAAAA---A-GAATAGGATTTTGATAGCTGGTCTCATTCGAAAATGTCTGATCTTTCGGTGTCATGCTTACATTCTTATTTAGCAGCTGGAGCAAATCTATTGAACTTACCCAAAG--AGACGAAGGTTACATAGTCTGTCTTTTCTTCTCTGCCATAGGTAAACTGCCAGTGGGCAAAAATTACTTCTGTTATTTTATAAAACTAATAACTACTGATTTGTTCACTGAAAAATCAACTCCATCTATCATAAATAGCTAACGGGAACAGGTATGTGATTTAAGTCA-TTTGCACTTGTGTGTGTTTGCAAGAACTTACGTAGAAAATGTTCCTACCAGATTTCAAAAATGATATTATTTTAATATGAAACTGGCAAATGAAGCTCTAGGGAATTAATAGTTACCTTCTGACTACCAAATTCCTTCTATACTTTACATGTGTTTACCTAAAAACATTATAAAATAGACTTTGCCCTTCTTATGCTTTTTAAATTGAAGGCATGAGGATAATGCGGTCCTTTTCATGGAGATTTGGGATGAACCTGAACCCTCATTGTTGAGCTGTGTGG-CACC--CAGTCTGCTCTCTTTTGCTCC-------------TCCCTGTTTCTGCCTCTGC------CTTAACCGTAGCGAGTGAGGCAGTCTCCACAACCTTCCCACCACGCTGTTATTC--TCTGGCTTTCCTGTTTCCGTGATTTGAGAAGTCCTGGAA-TAATCTATACGCTGTGTCTACGTTACACAACTATGTGTGGAATGAACTC---TCAAGACCTCCCGTGGG---------------CCTGGAGGTGGCATGTGGGACTGGAGGTGGCACGTAGGCCTGCAGGTGGCACGTGGGCCTGGAGGTGGCACTCGGTGGTGTGCCATTTCAAGGGTGCTGAGGTATTTCCCATT-----GTTGAGACCTGGGCCTCTGCTGGAAGAGTTGAAGTGATGGGAAAGCCAACTTCCAGAAGAAGAGGGAAAC-TAATGTTACAGCAGCCACATTCGCCTCGGTTTCTTCTAACCACTTCACAGTCCCATGTCCATGACAAAGTTGGTGACACCAGCATTTGCTTTCGTCTTGAATA-ACGTAACATATTTAAAGTAGCAAACCTTATAATATTCTGGCTTACATTAGAGTTTTATATAGCTTTATATTTATTC----TT-----ATCTATTTGAGCACAAACTGTCAATTGATTTGAATATTCCAAATTTCTCTTCCTCT-TCTTTCATTAAATGATTAGAGAACAAGTAAGGGATATGGAAAAGTAATGGGTGGTTTACTACCTC-ACAGA-AGTTCTTTA-------------CTCATTTATTTTACCAGATAGAGTTTTAACACATTGAGGTTTTTTTTAAGGAATATAACTTTAATCCTAAATCCTTTCTG-TGATATTAAG----TAGCAGAAATAAAGACCTA-TTTTT-----------------TATGTGTG----TGTGTGTGTATCTCACACCTGTTTGACCTTTCCTGTATTTATTTTGGAGAATTTTCTTTCTTCTGACTTTTACTGCCGTTGATGACTTCTTCCTTTTCAGGTTAATAGAA--TGTACAAAATGCAGAGCAACCAGGTTCGAGTGTATTTAACAATTGATTGTATCATTTAAAAAGTGA---AATCTACAATTGATAATAA i calJac3.chr4 C 0 C 0 s canFam3.chr1 56115935 2199 + 122678785 TTTTGAGAAAGATTTTAGTTGCTTTCTTTCATGGAATATGATTTACTGTGATCCAATTTCATCCAAGTATGGAAGCTTGGGCTTTTCCTTCCAACCTACCACCCACTTGGATAGAAGATCTTCAGCCTCTTTTTGGGGGCAAAGCATACGAATACATTGAGATGT-TTGGAAGATTGGATAATCAGAAGGAGCTCTGAGAAGGGTCTGTGCAATATCCACATGAGAGAAAAGAACGTTTGAAATAAA----TTGCCAGAGACATCATTACTGACGT-GTCGAAGCTTTAACtaaattaaagataattttttagaattaattataaatGCATGAAATTAGCCTT--CTTTTCT------ATGCACGCGATTTATGACTTGATGATTCCCTTGCAAACTTCATTTGCAAAATATTTTAAAGTTTATTAAGCCCTTTGACAAATACTGTGTCTTGATATAATCATTTCATTACCAAATTTTGGATGTCTGCTTGTCCCTCATTCTCTCACAT----CTCCCTGAGTCTAGTTGACTGGTG-TGCTTC-CTTTAGAAATCTTTGCAATGATGTTTATTGTGACATTAACTGTAAGGAAATAACCAAAGCAGAAACAGAATATGGCTCCAGACATGACATTTTAACATGCTGTGGAAAATTGTCTTTGTATTTTATTTGGTTTGCATTTTATTTGCTATTTTCAAAAGTTAAATACCACATTAAAAAAATGAGGAAGAGAATTTTGACAA--------GTATAAACATCTCTGACCTTTCTACTTAATAGTTATATTCCCATCTGGCCA-GGGAGAAAATCTATTGAATACATATGAATTCAGA-GAAGATTCTGTGGGGTGTCTCTC---CTTGGTCATCAGTGAACAGCCAGTGGGCGACAGGTGCT--CGTCATTCCATGGAGAT-----------ACTTAGTCTCCAAAGAGTTCACTCCATTCATTGTAAAGCACTAATAGCAGCAAAT-----ATTGCAGTCGTTTTGCACTTCTTTCTACCTGTAACAGCTTACATATAAGGTATTCCTATTAGATTTCATAAATGACATCAG--------AAGAATTGCAAGTACCATTCGGGGGGACCAATATTTCCGTTTTCACTACC-AACCCCATGTATACTTTAACTATGTTTGCTTAAAAGCATTA-ACAATGCAATGTCCTCTTCTTGCACTTTTAAAATCGAAGGCCTCAAAGTAATAAATCTGTTTTCATGGATGTTTG---TAACTGCGAACAGCCGTTCTCATGTGATGCTGTCACACACGATCTGTTGTCTTCTCTGGTTTACTTTTTCAGATTTCTGGTTCTGCTGTTGGGACC---TCAGCTGTTCGGAGTGAGGCTGCCTCTAAAATCCT-----CACCTCGTTTCTCTTTGTTGTGTCTCAGTTTCTGTGATTTGAGAAAGTCT-GAACCAAGCTCCGTGGCCGATCCCTGAGTCAGGTCCGTTCGGG----GAGCTCCACTGAGGAGTTGTCGCAGG---------------CCTGGCCTTCGCACGGGG---------------------------------------------------ACTGTGT----CACCTGTTTCAGGGCACAGACGCGCTCCGCTTCCTGGGGTTCGGACTTGAGTCTCT--TGGTGAGACTCCCTTGTTGGACAACTTG----CTCGGGGGCGAGGGGTCTGCAAAGTTGTGGCACCTAAAGCC--CTG-GTTTCCCCTCATTGTTTCTCCATCCCGGCTCCGGGACGGGTTTTGTGACACTACTATGCACTTTAACGCTGGACACACAGGAAAAACTCAAAATATCCAGTC--ATGGTATTTTTGCTTCCATGACAGTGTCATGTGGTTTTATATTCATTT----TTTATTAACTTCT-----CATAAATTATCCATTGATTCTAATATTCCAAACTGCCCTTCCTC-ACCCTCCGCTGCACCA------------TGAAAGACACGGCA--------GGTGGATTACTACTTT-GAGGGTATTTCTTTAAATTCAGGGGTTCCTCGGTTCTTTTACGAGACCAAATTTTCATACAGTGAGGTTTTCTTCTAAGAGTATAACTTTGATCCTAAATACTTTCTC-TAATGTTAGGTACCTACCAGAATTAAGGACCTA-TTTGTATATAGAGGGG------GATTTAAA-----------ATGTCTCTCAGCTGTTTGAAGTTTCCTGTGTTTATTTTAGAAAGTCTCCTGTCGATGGACTTTCATTGCCTTTGCCAGCTTCCTTCTGTTTAGTCTAATAGAG---GTGAAAAATACAAATTAACCAAGTTCAAGGGTGTATCGCAATCCGTCATATAA-CAAGTAAAAGTGAC-ATCTCCAATtgacgaggg i canFam3.chr1 I 3611 I 451 a score=431033.000000 s hg38.chr6_KB021644v2_alt 20149 161 + 185823 ATGAATGGTTTGAGATGATAATAGATTTAGAGTTCTAGCTCACGCCAACACTAAAATAA---CCATATGAGATAAAA------------------TA---ACATTTT---------------CTTTTTCCAGCAAAGCGAAAAA----------------ACCTGATTAATCCTACCACTAAAAAA------AAAACACTAAAATTACTGGAATacacacac s panTro4.chr6 170634950 160 + 172623881 ATGAATGGTTTGAGATGATAATAGATTTAGAGTTCTAGCTCACGCCAACACTAAAATAA---CCATATGAGATAAAA------------------TA---ACATTTT---------------CTTTTTCCAGCAAAGCGATAAA----------------ACCTGATTAATCCTACCACT-AAAAA------AAAACACTAAAATTACTGGAATacacacac i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172385540 158 + 174210431 ATGAATGGTTTGAGATGATAATAGATTTAGAGCTCTAGCTCACCCCAACACTAAAACAA---CCATATGAGATAAAA------------------TA---ACATTTT---------------CTGTTTCCAGCAAAGCAATAAA----------------ACATGATTAATCCTACCACT-AAAAA------AAA--ACTAAAATTACTGGAatacacacac i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156249701 158 + 157873769 ATGAATGGTTTGAGATGATAATAGATTTAGAGCTCTAGCTCATGCCAACACTAAAATAA---CCATATAAGATAAAA------------------TA---ACATTTT---------------CTTTTTCCAGCAAAGTGATAAA----------------GCCTGATTAATCCTACCACT-AAAAA------AAA--CCTAAAATTACTGGAATacacacac i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168065575 165 + 169853907 ATGAATGGTTTGAGATGATAATAGAGTTAGAGCTGTAGCTCACGCCAACACTAAAATAA---CCATATGAGATAAAA------------------TA---ACGTTTT---------------CTTTTTCCGGCAAAGCAATAAA----------------ACCTGATTGATCCTACCACTAAAAAAAAAAACAAA--ACTAAAATTACTGGAATacacacac i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169021408 164 - 170955103 ATGAATGGTTTGAGATGATAATAGAGTTAGAGCTCTAGCTCACGCCAACACTAAAATAA---CCATATGAGATAAAA------------------TA---ACGTTTT---------------CTTTTTCCGGCAAAGCAATAAA----------------ACCTGATTGATCCTACCACT-AAAAAAAAAACAAA--ACTAAAATTACTGGAATacacacac i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163837671 158 + 165299245 ATGAATGGTTTGAGATGATAATAGAGTTAGAGCTCTAGCTCACCCCAACACTAAAATAA---CCATATgagataaaa------------------ta---acatttt---------------ctttttccggCAAAGTGATAAA----------------ACCTGATTGATCCTACcact-aaaaa------aaa--actaaaattactggaatacacacac i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96617500 161 + 98384682 ATGAATGGTTTGAGATGATAATAGAGTTAGAGCTCTAGCTTACGCCAACACTAAAATAA---CCATATGAGATAAAA------------------TA---ACATTTT---------------CTTTTTCTGGCAAAGTGATAAA----------------ACCTGATTGATCCTACCACT-aaaaaaaaaacaaa--aaaaaa---acaaaaaaaaaaacac i chlSab2.chr13 C 0 I 31 s calJac3.chr4 169824143 174 + 171630274 AGGGATGGGTTGAGATGATAACAGATTTAGAGCTCTAGCTCACAACAACACTAAAATAA---TCATATCAGATAAAATACACAAACGTTAAAAACTA---ACGTTTA---------------CTTTTTCAGACAATGTGATAAA----------------CCTTGATTGATCATACCAGT-AAAA-------ACA--AGTAAAATT-CTAGAACACACACAC i calJac3.chr4 C 0 C 0 s canFam3.chr1 56118585 193 + 122678785 ATGAGTGGTTTGGGATGATGGTAAATTCAGAGCCATACCTCATAGTGTCACTGAAATAAATTTCATAGGAGAGTAAA------------------TGTATACATGTTAAAAAGCATCCCCCACCCTTGCTCCCAATGTGGTAGATTAGAGAGATCAGATGCCCTGGGTGAGTCTGAGATT-ATAA-------TCA--GCTAGATATTCTGG-ATACATAGAC i canFam3.chr1 I 451 C 0 a score=12585.000000 s hg38.chr6_KB021644v2_alt 20310 36 + 185823 ------------------acacacacacacacacacacacacacacatatacgt s panTro4.chr6 170635110 20 + 172623881 ------------------acacacacacacac----------------atacgt i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172385698 24 + 174210431 ------------------acacacatacacac------------atatatacat i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156249859 22 + 157873769 ------------------acacacacacacat--------------acatacat i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168065740 14 + 169853907 ------------------acatacacacacat---------------------- i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169021572 14 - 170955103 ------------------acatacacacacat---------------------- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163837829 10 + 165299245 ----------------------acacacacac---------------------- i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169824317 14 + 171630274 ------------------ACGCACACACACCC---------------------- i calJac3.chr4 C 0 C 0 s canFam3.chr1 56118778 48 + 122678785 ACACATTTGCTCACATTcacatacacacacac------acacacacacacacac i canFam3.chr1 C 0 C 0 e chlSab2.chr13 96617661 31 + 98384682 I a score=37689.000000 s hg38.chr6_KB021644v2_alt 20346 12 + 185823 acatatctatac s panTro4.chr6 170635130 12 + 172623881 acaTATCTATAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172385722 12 + 174210431 acataTCTATAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156249881 12 + 157873769 acatatctatac i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168065754 12 + 169853907 acaTATCTATAC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169021586 12 - 170955103 acatatctatac i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163837839 12 + 165299245 acacatctatac i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96617692 12 + 98384682 acatatctatac i chlSab2.chr13 I 31 C 0 s calJac3.chr4 169824331 6 + 171630274 ------CTATAC i calJac3.chr4 C 0 C 0 s canFam3.chr1 56118826 12 + 122678785 acGTGTGTACAC i canFam3.chr1 C 0 I 15999 a score=229000.000000 s hg38.chr6_KB021644v2_alt 20358 101 + 185823 tgag-atatgtgtatgcacatatatgtatagagacgtaagtgtgtgtatg------tatgtgcgtgtgtatatagatataagatataggtatagagagagatTGTAGG s panTro4.chr6 170635142 101 + 172623881 TGAG-atatgtgtatgcacatatatgtatagagacgtaagtgtgtgtatg------tatgtgtgtgtgtatatagatatAAGATATAGGTGTAGAGAGAGATTGTAGG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172385734 101 + 174210431 TGAt-atatgtgtatgcacatatatgtatagagacaaaagtgtgtgtatg------tatgtgtgtgtgtatatagatataggatataggtataGAGAGAGATTGTAGG i ponAbe2.chr6 C 0 M 789 s nomLeu3.chr3 156249893 101 + 157873769 cgat-atatgtgtatgcacctatatgtatagagacataagtgtgtgtatg------tatgcgtgtgtgtatatagatataGGATACAGGTATAGAGAGAGATTGTAGG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168065766 97 + 169853907 TGAC-ATATGCATATGCACATATATGTGTGGAGACATAAgtgtgtgtatg------tgtgtgtgtgtgtgtATAGATGTAGGATA----TATATAGAGAGATTATAGG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169021598 97 - 170955103 tgac-atatgcatatgcacataTATGTGTGGAGACATAAGTGTGTGTATG------TATGTGTGTGTGTGTATAGATGTAGGATA----TATATAGAGAGATTATAGG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163837851 99 + 165299245 tgat-atatgtatgtgtacatatatgtatggagacataagtgtgtgtatg----tatgtgtgtgtgtgtgtatagatgtaggata----tagagagagagattatagG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96617704 104 + 98384682 tgataatatgtatatgcacatatatgtatggagacataagtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtatagatgtaggata----tatatagagagattataGG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169824337 76 + 171630274 AGAt-atatgtatatgcacac------------------gtgtgtgtatg------tatatgtgtgtgtgtatGG------GATACAGATGTGTAG-GAGATTGTAGG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56118838 15999 + 122678785 I a score=1893965.000000 s hg38.chr6_KB021644v2_alt 20459 857 + 185823 GACCAAGAGGGGATACGGGTAGAAGGATTAGAAAGCTGTTATGATGTGGGTGGGAAGTGATGGACACAAATCAAAATGGAGGCTTTACTGTGAGCACTTAAATGGTTTTCAAAGAATCTACAGAGAAAGGGTGATAAAAGTTCTGTGATGAAAAAAGAAATTAAGCAAATAATATGATAAATATTTGAATGTATCTAGTCAAACACCATAAATAATGTTTTAGGGGGCCAGAAAAGATAGAACGAATAGACCCAAGATTAGCTTGTAATTTGGGAGATGGGATAACGTAAGTTTGTTGAGAAATTTTAGTTCCGGAACCTTGCTAAATAGAATATATGACTTTAAGTACTGATGTATTAAATTTTGCAGtggttgattttgagtgccagtctgactggatt-aggggtgccctgatagctggtaaagcgttcactttcctcagcgcatcagcagactctgagcctatcctcctccccctgcaagggaaacccaggtgaactggccctggattggaaagactgggctgccccaggtgtgtccgtgagggtgtttctggagactggtgtgtgacttgggggactgagtggggaacatcctcctcagtgtgggtgggcaccatcaaatcgagtgggagtccagatggaagacaaaggcagagcgaggccgcatttttgctctctcacttctgggacacccttct-ttgcccttgcaaaccagaattccaagctctctggcttttggaatctgagactcacacaagcagtggtcaggctcttgagtcttcagacgtggactgagagttacatcattacttccttggtcctgaggccttcaggcttgga--ttgagccaggagcct s panTro4.chr6 170635243 857 + 172623881 GACCAAGAGGGGATACGGGTAGAAGGATTAGAAAGCTGTTATGATGTGGGTGGGAAGTGATGGACACAAATCAAAATGGAGGCTTTACTGTGAGCACTTAAATGGTTTTCAAAGAATCTACAGAGAAAGGGTGATAAAAGTTCTGTGATGAAAAAAGAAATTAAGCAAATAATATGATAAATATTTGAATATATCTAGTCAAACAACATAAATAATGTTTCAGGGGGCCAGAAAAGATAGAACGAATAGACCCAAGATTAGCTTGTAATTTGGGAGATGGGATAACATAAGTTTGTTGAGAAATTTTAGTTCCAGAACCTTGCTACATAGAATATATGACTTTAAGTACTGATGTATTAAATTTTGCAGtggttgattttgagtgccagtctgactggatt-aggggtgccctgatagctggtaaagcgttcactttcctcagcgcatcagcagactctgagcccatcctcctccccctgcaagggaaacccaggtgaactggccctggattggaaagactgggctgccccaggtgtgtccgcgagggtgtttctggagactggtgtgtgagttgggggactgagtggggaacatcctccccattgtgggtgggcaccatcaaattgagtgggagtccagatggaagacaaaggcagagcgaggccgcatttttgctctctcacttctgggacacccttct-ttgcccttgcaaaccagaattccaagctctctggcttttggaatctgagactcacacaagcagtggtcaggctcttgagtcttcagacgtggactgagagttacatcattacttccttggtcctgaggccttcaggcttgga--ttgagccaggagcct i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156249994 849 + 157873769 GACCAAGAGGGGATACGGGTAGAAGGATTAGAAAGCTGTTATGATGTGGGTGGGAAGTGATGGACACAAATCAAAATGGAGGCTTTACTGTGAGCACTTAAATGGTTTTCAAAGAACCTACAGAGAAAGTGTGATAAAAGTTCTGAGATGAAAAAAGAAATTAAGCAAATAATATGATAAATATTTGAATACATCTAGTCAAACAACATAAATAACGTTTTAGGGGGCCAGAAAAGATGGAACGAATAGACCCAAGATTAGCTTGTAATCTGGGAGATGGGATAACGTAAGTTTGTTGAGAAAGTTTAGTTCTGGAACCTTGCTAAATAGAATATAGGACTTTAAGTACTGATGTATTAAATTTTGCAGtggttgattttgagtgccagtctaactggatt-aggggtgtcctgatagctggtaaagcgttaactttcctcagcgcatcagcagactctgagcctgtcct----cccctg-aagggaaactcaggtgaactggccctggattggaaagactgggctgccccaggtgtgcccgtgagggtgtttttggagactggtgtgtgagtggggggactgagtgaagaacatcctccccagtgtgggtgggcaccatcaaacggagtgggagtt--gatggaagacaagggcagagcgaggccacgtttttgctctctcacttctgggacacccttttcttgcccttgcaaaccacagttccaagctctctggcttttggaatctgagact--cacaagcagtggtcaggctcttgagtcttcagacgtggactgagagttacatcattacttcctgggtcctgaggccttcaggcttgga--ttgagccaggagcct i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168065863 843 + 169853907 GACCAAGAGAGGATACGGGTAGAAGGATTAGAAAGCTGTTATGATGTAGGTGGGAAGTGATGGACACAAATC-AAATGGAGGCTTTACTGTGAGCACTTAAATGGTTTTCAAAGAACCTACAGAGAAAGTGTGATAAAAGTTctgagatgcaaaaagaaattaagcaaataatatgataaatatgtaaatacatctagtcaaacaatataaataatattttagggggccaaaaaaggtagaaccaatagacccaaaattagcttgtaatttgggagatgggataatgtaagttTGTTGAGAAATTTTAGTTCTGGAACCTTGCTAAATAGAATGTAGGAGTTTAAGTGCTGATGTATTAAATTTTGCAGtggttgattttgagtaccagtctgactggattaagggatgccctgatagctggtaaagtgttaactttcctcagtgcatcagcagactctgagccggtcatcctccccctgcaagggaaactcaggtgaactggcccttgattggaaagactgggctgccccaggtgtgcctgtgagggtatttctggagactggtgtgtgagttgggggactgagtggggaataccctccccaatgtgggtgtgcaccatcaaatagggtgggagtctagatggaagacaaaggcagagtgaggccgcatttttgctctctcacttctgggacacccttctcttgcccttgcaaaccagaattccaagctctctggcttttggaatctgagactcacacaagcagtggccaggc-------tcttcagacgtggactgagagttacatcatcgcttccttggtccta--------aggcttgga--ttgagccaagagcct i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169021695 851 - 170955103 GACCAAGAGAGGATACGGGTAGAAGGATTAGAAAGCTGTTATGATGTAGGTGGGAAGTGATGGACACAAATC-AAATGGAGGCTTTACTGTGAGCACTTAAATGGTTTTCAAAGAACCTACAGAGAAAGTGTGATAAAAGTTctgagatgcaaaaagaaattaagcaaataatatgataaatatgtaaatacatctagtcaaacaatataaataatattttagggggccaaaaaaggtagaaccaatagacccaaaattagcttgtaatttgggagatgggataatgtaagttTGTTGAGAAATTTTAGTTCTGGAACCTTGCTAAATAGAATGTAGGAGTTTAAGTGCTGATGTATTAAATTTTGCAGtggttgattttgagtaccagtctgactggattaagggatgccctgatagctggtaaagtgttaactttcctcagtgcctcagcagactctgagccggtcatcctccccctgcaagggaaactcaggtgaactggcccttgattggaaagactgggctgccccaggtgtgcctgtgagggtatttctggagactggtgtgtgagttgggggactgagtggggaacaccctccccaatgtgggtgggcaccatcaaatagggtgggagtctagatggaagacaaaggcagagtgaggccgcatttttgctctctcacttctgggacacccttctcttgcccttgcaaaccagaattccaagctctctggcttttggaatctgagactcacacaagcagtggccaggc-------tcttcagacgtggactgagagttacatcatcgcttccttggtcctaaggccttcaggcttgga--ttgagccaagagcct i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163837950 848 + 165299245 GACCAAGAGAGGATACGGGTGGAAGGATTAGAAAGCTGTTATGATGTAGGTGGGAAGTGATGGACACAAATC-AAATGGAGGCTTTACTGTGAGCACTTAAATGGTTTTCAAAGAACCTACAGAGAAAGTGTGATAAAAGT--TGAGATGCAAAAAGAAATTGAgcaaa-aatatgataaatatgtaaatacatctagtcaaacaatataaataatattttaggggGCCAAAAAAGGTAGAACCAATAGACCCAAAATTAGCTTGTAATTTGAGAGATAGGATAATGTAAGTTTGTGGAGAAATTTTAGTTCTGGAACCTTGCTAAATAGAATGTAGGAGTTTAAGTGCTGATGTATTAAATTTTGCAGTGGTTGATTTTGAGTACTAGTCTGACTGGATTAAGGGATGCCCTGATAGCTGGTAAAGTGTTAACTTTCCTCAGTGCATCAGCAGACTCTGAGCCGGTCGTCCTCCCCCTGCAAGGGAAACTCAGGTGAACTGGCCCTTGATTGGAAAGACTGGGCTGCCCcaggtgtgcctgtgagggtatTTCTGGAGACTGGTGTGTGAGTTGGGGGACTGAGTGGGGAACACCctccccaatgtgggtgggcaccatcaaATAGGGTGGGAGTCCAGATGGAAGACAAAGGCAGAGTGAGGCCACATTTTTGCTCTCTCACTTCTGAGACACCCTTCTCTTGCCCTTGCAAACCAGAATTCCAAGCTCTCTGGCTTTTGGAATCTGAGACTCACACAAGCAGTGGCCAGGC-------TCTTCAAACGTGGACTGAGAGTTACATCATCGCTTCCTTGGTCCTAAGGCCTTCAGGCTTGGA--TTGAGCCAAGAGCCT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96617808 851 + 98384682 GACCAAGAGAGGATACGGGTAGAAGGATTAGAAAGCTGTTATGATGTAGGTGGGAAGTGATGGACACAAATC-AAATGAAGGCTTTACTGTGAGCACTTAAATGGTTTTCAAAGAACCTACAGAGAAAGTGTGATAAAAGTTctgagatgcaaaaagaaattaagcaagtaatatgataaatatgtaaatacatctagtcaaacaatataaataatattttagggggccaaaaaaggtagaaccaatagacccaaaattagcttgtaatttgggagatgggataatgtaagttTGTTGAGAAATTTTAGTTCTGGAACCTTGCTAAATAGAATGTATGAGTTTAAGTGCTGATGTATTAAATTTTGCAGtggttgattttgagtaccagtctgaccggattaagggatgccctgatagctggtaaagtgttaactttcctcagtgcatcagcagactctgagcccgtcgtcctccccctgcaagggaaactcaggtgaactggcccttgattggaaagactgggctgccccaggtgtgcctgtgagggtatttctggagactggtgtgtgagttgggggactgagcagggagcaccctccccaatgtgggtgggcaccatcaaatagggtgggagtccagatggaagacaaaggcagagtgaggccgcatttttgctctctcacttctgggacacccttctcttgcccttgcaaaccagaattccaagctctctggcttctggaatctgagactcacacaagcagtggccaggc-------tcttcagacgtggactgagagttacatcatcgcttccttggtcctaaggccttcaggcttgga--ttgagccaagagcct i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169824413 841 + 171630274 GAGAAAGAGGGG-TGCAGGCAGAAGGATTAGAAAGCTGTGATGATGTAGGGGGGGCGTGATGAGCATAAATCAAAATGGAGAC-TCACCGCGAGCACTgaaatga-tttcaaagaacgtacagaaagagtgtgataagagttatgaggtgtaaaaagaaattaagcaggtaacatgataaatattcgactgcatctagtcgaacaacataaataatattttgcagggctgaaaaagatagaaccaatagacccaaaatcagcttgtaagttggcagacaggataatgtaagttTGTTAAGAAACTTCAGTTCTGCAACCTTGCTAAAT-GAATGTATGGCTTTAATTCCTGATGCGTTGAATTTTGCAGTTgttaattctgggtgccaatctgactggattaaggggtgccctcctagctggcaaagcattacctttcctcagtgtatcagcagtctctgagcctgtc---ctcctcctgcaagggaaaccca--------ggcctttgactggcgagacggggctgccccaggtgtgcccatgaaggtgtttccagagaccggtgtgtgacttgggggactgagtggggaacatcctccccagtgtgcgtgggcactatcaaatcgagccggagtccagattgaagacaaagacagagtgaggatgaatttgtactctctctcttctgggacacacttctccagcccttgcacaccaggatgccaagctctctgggttttggaatctgagactcacttaa-----ggccaggctcttgggtcttcacatgtgaactgagagttataccatcgcttccttggtcctgagacctttggtcctgagacctgagccaggagcct i calJac3.chr4 C 0 C 0 e canFam3.chr1 56118838 15999 + 122678785 I e ponAbe2.chr6 172385835 789 + 174210431 M a score=2275971.000000 s hg38.chr6_KB021644v2_alt 21316 773 + 185823 ggcattcctaattcttaagcttgcagataaacctacagcctattgttggtctcagccttcataatcaagggagccaattcccacaataaacctcttctctctggagaattctgactaaaacCttaagatctataatacaa-ccacagaaataataaaaatcagtatagtacctctaaactattagagaaa--aaagtaaatttaaaaacatgaaacagacaataaaagagaaaaaaggtatgggaaa-tgggacaaat-aaaaatattaagtaatacagaaataactcaaatatatcaataattacaataaatgcaaatgcattaaattttacatttaaaagacaaaggttttgacactggatATTTCTAAAAATCCATATGAAATAATCTTAAAATACATGATGTTTTAGACAAATTTAACAggaaattggccttcagatagaactatataagaaggaagttactgggcagtgctcttatgaacagcatctgtaagagaattagggaagcaagattgggcaaagaaagaagtaaaaatgggatgcagttgcaagtgaggcatcagctcgtcccactgggtttctggacctgagatggatcctcagaatttccctaacttgagaaagggggctgtgtcttatactcttacattgcccagtttcaaatagggactgcttcctggataggagtgtga-ctttggcaagccaattctctttgttagaggaaaatttcttaggaaagacttagcataaagctgtAATTTTT-AAAAAAGAAGAC s panTro4.chr6 170636100 773 + 172623881 ggcattcctagttcttaagcttgcagataaacctacagcctattgttggtctcagccttcataatcaagggagccaattcccacaataaacctcttctctctggagaattctgactaaaacCttaagatctataatacaa-ccacagaaataataaaaatcagtatagtacctctaaactattagagaaa--aaagtaaatttaaaaacatgaaacagacaataaaagagaaaaaagatatgggaaa-tgggacaaat-aaaaatattaaataatacagaaataactcaaatatatcaataattacaataaatgcaaatgcattaaattttacatttaaaagacaaaggttttgacactggatatttttaaaaaTCCATATGAAATAATCTTAAAATACATGATGTTTTAGACAAATTTAACAggaaattggccttcagacagaactatataagaaggaagttactgggcagtgctcttatgaacagcatccgtaagagaattagggaagcaagactgggcaaagaaagaagtaaaaatgtgatgcagttgcaagtgaggcatcagctcgtcccactgggtttctggacctgagatggatcctcagaattgccctaacttgagaaagggggctgtgtcttatactcttacattacccagtttcaaatagggactgcttcctggataggagtgtga-ctttggcaagccaattctctttgttagaggaaaatttcttaggaaagacttagcataaagctgtATTTTTT-AAAAAAGAAGAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172386646 774 + 174210431 ggcattcctagtttttcagcttgcagataaacctacagcctattgttggtctcagccttcataatcaagggagccaattcccacaataaacctcttctgtctggagaattctgactaaaacCTGAAGATCTATAATACAACCCACAGAAATAATAAAAATCAGTATATTACTTCTAAACTATTAGACAAA--AAAGTAAATTTAAAAACATGAAACagacaataaaagagaaaaaagatatgggaaa-cgggacaaat-aaaaatattagataatacagaaataactcaaatatatcaataattacaataaatgcaaatgcattaaattttacatttaaaagacaaaggttttgacactggatattttaaaaaaTCCATATGAAATAATCTTAAAATACATGATGTTTTAGACAAATTTAACAGGAAATTGGCCTTCAGATAGAACTATATAAGAaggaagttactgggcagtgctcttatgaacagcatctgtaagagaataagggaagcaagattgggcaaagaaagaagtcaaaatgtgatgcagttgcaagtgaggcatcaactcatcccactgggtttctggacctgagatggagcctcagaattgccctaacttgagaaagggggctgtgtcttatactcttacattgcccagtttcaaatagggactgcttcctggatagaagtgtga-ctttggcaagccaactctcttTGTTAGAGGAAAATTTCTTAGGAAAGACTCAGCATAAAGCTGTAGTTTTT-AAAAAAGAAGAC i ponAbe2.chr6 M 789 C 0 s nomLeu3.chr3 156250843 769 + 157873769 ggcattcctagttcttcagcttgcagataaacctacagcctattgttggtctcagccttcataatcaagggagccaattcccacaataaacctcttctctctggagaattctgactaaaacCTTAAGATCTATAATacaa-ccacagaaataataaaaatcagtatattacttctaaactattagagaaa--aaagtacatttaaaaacatgaaacagac----aaagagaaaaaagatatgggaaa-tgggacaaat-aaaaatattaaataatgcagaaataactcaaatatatcaataattacaataaatgcaaatgcattaaattttacatttaaaagacaaacgttttgacactggatatttttaaaaatccatatgaaattatCTTAAAATATGTGATGTTTTAGACAAATTTAACAggaaattggccttcagatagaactatataagaaggaagttactgggcagtgctcttatgaacagcatctgtaagagaataagggaagcaagattgggcaaagaaagaagtcaaaatgtgatgcaactgcaagtgaggcatcagttcgtcccactgggtttctggccctgagatggatcctcagaattgccctaacttgagaaagggggctgtgtcttgtactcttatattgcccagtttcaaatagggactgcttcctggataggagtgtga-ctttggcaagccaattctctttgttagaggaaaatttcttaggaaagacttagcataaagctgtAATTTTT-AAAAAAGAAGAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168066706 768 + 169853907 ggcgttcctagttcctcagcttgcagataaacctacagcctattgtgggtctcagccttcaaaatcaagggagccaattcccacaataaacctcttctctctggagaattctgactaaAatcttaagatctataatacaa-ccacagaaataataaaaatcagtatattgcttctaaactattagagaaa--aaagtaaatttaaaaacatgaaacgggcaataaaagagaaaacagatatgggaaa-ggggacaaat-aaaaatattaaataatacagaaataactcaaatatatcagtaattacaataaatgcaaatgcattaaactttacatttaaaagacaaaggttttgacactggatatttttaaaaaTCCGTATGAAATCATCTTAAAATACATGATGTTTTAGACAAATTTAACAggaaattggccttcagatagaactatataagaaggaagttactgggcagtgctgttatgaacagcatctgtaagagaataagggaagcaagactgggcaaagaaagaagtcaacatgtgatgcagttgcaagtgaggcatcagctggtcccactggctgt------ctgagatggatcctcagaattgccctaacttgagaaagggggctgtgacttacactcttatattgcccagtttcgaatagggactgcttcctggataggagtgtgg-ctttggcaagccaactctctttgtcagagggaaatttcttaggaaagacttagcataaagctgtAATTTTTAAAAAAAGAAGAC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169022546 768 - 170955103 ggcgttcctagttcttcagcttgcagataaacctacagcctattgtgggtctcagccttcaaaatcaagggagccaattcccacaataaacctcttctcTCTGGAGAATTCTGACTAAAatcttaagatctataatacaa-ccacagaaataataaaaatcagtatattgcttctaaactattagagaaa--aaagtaaatttaaaaacatgaaacgggcaataaaagagaaaacagatatgggaaa-ggggacaaat-aaaaatattaaataatacagaaataactcaaatatatcagtaattacaataaatgcaaatgcattaaactttacatttaaaagacaaaggttttgacactggatatttttaaaaaTCCGTATGAAATCATCTTAAAATATATGATGTTCTAGACAAATTTAACAggaaattggccttcagatagaactatataagaaggaagttactgggcagtgctgttatgaacagcatctgtaagagaataagggaagcaagactgggcaaagaaagaagtcaacatgtgatgcagttgcaagtgaggcatcagctggtcccactggctgt------ctgagatggatcctcagaattgccctaacttgagaaagggggctgtgacttacactcttatattgcccagtttcgaatagggactgcttcctggataggagtgtgg-ctttggcaagccaactctctttgtcagagggaaatttcttaggaaagacttagcataaagctgtAATTTTTAAAAAAAGAAGAC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163838798 772 + 165299245 GGCGTTCCTAGTTCTTCAGCTTGCAGATAAACCTACAGCCTATTGTGGGTATCAGCCTTCAAAATCAAGGGAGCCAATTCCCACAATAAACCTCTTCTCTCTGGAGAATTCTGACTAAAATCTTAAGATCTATAATACaa-ccacagaaataataaaaatcagtatATTGCTTCtaaactattagagaaa--aaagtaaatttaaaaacatgaaacgggcaataaaagagaaaacagatatgGGAAA-ggggacaaat-aaaaatattaaataatacagaaataactcaaatatatcagtaattacaataaatgcaaatGCAttaaactttacatttaaaagaCAAAGGTTTTGAcactggatatttttaaaaatccatatgaaATCATCTTAAAATATATGATGTTTTAGACAAATTTAACAGGAAATTGGCCTTCAGATAGAACTATATAAGAAGGAAGTTACTGGGCAGTGCTGTTATGAACAGCATCTGTAAGAGAATAAGGGAAGCAAGACTGGGCAAAGAAAGAAGTCAATATGTGATGCAGTTGCAAGTGAGGCATCAGCTGGTCCCACTGGGTGTCTGGACCTGAGATGGATCCTCAGAATTGCCCTAACTTGAGAAAGGTGGCTGTGACTTATACTCTTATATTGCCCAGTTTCGAATAGGGACTGCTTCCTGGATAGGAGTGTGA-CTTTGGCAAGCCAACTCTCTTTGTCAGAGGGAAATTTCTTAGGAAAGAC--AGCATAaagctgtaattttttaaaaaagaagac i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96618659 775 + 98384682 ggcgttcctagttcttcagcttgcagataaacctacagcctattgtgggtctcagccttcaaaatcaagggagccaattcccacaataaacgtcttctcTCTGGAGAATTCTGACTAAAatcttaagatctataatacaa-ccacagaaataataaaaatcggtatattgcttctaaactattagataaa--aaagtaaatttaaaaacatgaaatgggctaaaaaagagaaaacagatatgggaaagggggacaaat-aaaaatattaaataatacagaaataactcaaatatatcagtaattacaataaatgcaaatgcattaaactttacatttaaaaggcaaaggttttgacactggatattttaaaaaATCCATATGAAATAGTCTTAAAATATATGATGTTTTAGACAAATTTAACAggaaattggccttcagatagaactatataagaaggaagtcactgggcagtgctgttatgaacagcatctgtaagagaataagggaagcaagactgggcaaagaaagaagtcaacatgtgatgcagttgcaagtgaggcatcagctggtcccactgggtgtctggacctgagatgggtcctcagaattgccctaacttgagaaagggggctgtgacttatactcttatattgcccagtttcgaatagggactgcttcctggataggagtgtga-ctttggcaagccaactctctttgtcagagggaaatttcttaggaaagacttagcataaagctgtAATTTTTTAAAAAAGAAGAC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169825254 771 + 171630274 ggcatccctagttcttcagcttgtagat-ggcctacagcctattgtgggtctcagccttcataatc-agggagccacgtcccacaataaacctcttctcTTCCAAGAATTCTGACTAGGACCTTAGGATTTATAATACAG-CCACAGAAATAATAGAAATCAATATATTACTTCTAAATGCTTAGAGAAAAGAAAGCAAATTTaaaaacattaaataggcaataaaagagaaaaaagataagggaaagagggacaaataaaaaataataaataatacagaaataactcaaacatatcagtaattacaagaaatgcaaatgtattacattttacatttaaaagacaaaggttttaacactggataTTTTT-AAAATCCATATGAAATTGTCTTAAAACATATGATATTTTAGACAAGTTTAACAggaaattggctttgaggtagaaatctgtaagaaggaagtttctgggcagtgctcttacgaacaaaatctgtaagagaataaggaaagcaacattaagcaaagaaagaagtcaaaaagtggtgcaggggtca-tgaggcatcagccggtcctactgggcgt-ttgacctgagatgcaccctcagaatcgccctgactggagaaag--ggccgcatcttacagtcctgtattgcccggttttgaatgggaactgcttcccagataggagtgtgacctttggcaagccagttctcttggttagaggaaaatttcttgggaaagacATGGTATGAAACTGTAATTTTT-AAAAAAGAAGGC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56118838 15999 + 122678785 I a score=297686.000000 s hg38.chr6_KB021644v2_alt 22089 93 + 185823 AAAATCAAAGCAGTA----CCTAGGAATTAATATACAAAAAATGTGCAAAACTTTTATGCAGGAAATTATTATAGCAAAGTATTGGTATAGGACAAG s panTro4.chr6 170636873 93 + 172623881 AAAATCAAAGCAGTA----CCTAGGAATTAATATACAAAAAATGTGCAAAACTTTTATGCAGGAAATTATTACAGCAAAGTATTGGTATAGAACAAG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172387420 93 + 174210431 AAAATCAAAGCAGTA----CCTAGGAATTAATATACAAAAAATGTGCAAAACTTTTATGCAGAAAATTATTACAGCAAAGTATTGGTATAGGACAAG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156251612 93 + 157873769 AAAATCAAAGCAGTA----CGTAGGAATTAATATACAAAAAATGTGCAAAACTTTTATGCAGAAAATTATTACAGCAAAGTATTGGTATAGGACAAT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168067474 93 + 169853907 AACATCGAAGCAGTA----CCTAGGGACTAATATACAAAAAGTGTGCGAAAGTTTTATGCAGGAaattattacagcgaagtattgatataggacaag i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169023314 93 - 170955103 AACATCGAAGCAGTA----CCTAGGGACTAATATACAAAAAGTGTGCGAAAGTTTTATGCAGGAaattattacagcgaagtattgatataggacaag i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163839570 93 + 165299245 aacatCGAAGCAGTA----CCTAGGGACTAATATACAAAAAGTGTGCAAAAGTTTTATGCAGGAAATTATTACAGTAAAGTATTGATATAGGACAAG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96619434 93 + 98384682 AACATCGAAGCAGTA----CCTAGGGACTAATATACAAAAAGTGTGCAAAAGTTTTATGCAGGAaattattacagcaaagtattgatataggacaag i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169826025 93 + 171630274 AAAATCAAAGCCGTA----CCTAGAAATTAATATACAGAAAGTGTGCAAAAGTTTCACGCAGGAGattgcggcagcaaagcactggcatagggcaag i calJac3.chr4 C 0 C 0 s canFam3.chr1 56134837 95 + 122678785 AAAACAAAAGCAATAATTTTCTAGGAATAGATATAATAAAAGTGTGCAAAACTTGCAAGCA--Aaattattatagcacgatgttgttatagggagag i canFam3.chr1 I 15999 C 0 a score=2459746.000000 s hg38.chr6_KB021644v2_alt 22182 988 + 185823 TAAAATCAACTAATGCAAAACAAGAAAAAC----TTCAGAAACAGACTCAGGGCATTATGGAAGTATTA----TTTAAGACAGAattaactttgcagatcagtgggggaaaggatggacttcaacaaatagcagtgagacacttggttagccctaggaaaaaatacaGtgaaattctatccttcctttgaactatacacaataattaagataatcaaagtgaaagacagaatacactattagaacataatttggaatttatatttatggcctcagaaaagggaacggcttattaaacaggagataaagaaac--agagaaaagattgatatatgcaactacaatgaaattcataacttccattcactaaaagacaccataaagac-agtgaaataaacgaggcacaaaaggagataaaatatttaccacacatgtaactgacatagattggaat-cataatacctaaattagtcctacaaaaagccaaagacaagctcatac--aaaatgggcataaaatttgaatatgaactta---aaggcaaaaatggataatccaataaacacatgaaaatgtttgccaattgaaatcatagaaataaaaacaaaaaccacagtgagatactacttcacatccatcagactgccaaaatgtgcaacgtctgacaatacttggagttataaaggatgtggaacaaga-aaacacttgtgtgctgtgggtgggagaggaaatctgcacacttgac-tacagcacaggg--------------------------------------------tggccgcatctcctaacacttg-ga-ggacctggactttgatgtagccattgcactccaagctgtgggacctagagaaacta--ttgcaggcgagcgtgaggtgacaggtacaatatcacagaaacagagtttgtaaaaatacataagtggaaacaaccaaaatgtgcatgg--agtagaatggatgaatcaattcccgtatattagcataacaaaatactatcatgcagtaaaaattaatgaattacagtga s panTro4.chr6 170636966 988 + 172623881 TAAAATCAACTAATGCAAAACAAGAAAAAC----TTCAGAAACAGACTCAGGGCATTATGGAAGTATTA----TTTAAGACAGAattaactttgcagatcagtgggggaaaggatggacttcaacaaatagcagtgagacacttggttagccctagg-aaaaaTACagtgaaattctatccttcctttgaactatacacaataattaagacaatcaaagtgaaagacagaatacactattagaacataatttggaatttatatttatggcctcagaaaagggaatggcttattaaacaggagataaagaaac--agagaaaagattgatatatgcaactacaatgaaattcataacttccattcactaaaagacaccataaagac-agtgaaataaacgaggcacaaaaggagataaaatatttaccgcacatgtaactgacatagattggaat-cataatacctaaattagtcctacaaaaagccaaagacaagctcatac--aaaatgggcataaaatttgaatatgaactta---aaggcaaaaatggataatccaataaacacatgaaaatgtttgccaattgaaatcatagaaataaaaacaaaaaccacagtgagatactacttcacatcaatcagactgccagaacgtgcaacgtctgacaatactgggagttataaaggatgtggaacaaga-aaacacttgtgtgctgtgggcgggagaggaaatctgcacacttgac-tagagcacaggg--------------------------------------------tggccacatctcctaacactcgaga-ggacctggactttgacatagccattgcactccaagctgtgggacctagagaaatta--ttgcaggcgagcgtgaggtgacaggtacaatatcacagaaacagagtttgtaaaaatacataagtggaaacaaccaaaatgtgcatgg--agtagaatggatgaatcaattcccatatattagcataacaaaatactatcatgcagtaaaaattaatgaattacagtga i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172387513 987 + 174210431 TAAAATCAACTAATGCAAAACAAGAAAAAC----TTCAGAAACAGACTCAgggcattatggaagcatta----tttaagacagaattaactttgcagatcagtgggggaaaggatggacttcaacaaatagcagtgagacacttggttagccccaggaaaaaatacaGtgaaattctatccttcctttgaactatacacaataattaagacaatcaaagtcaaagacagaatacactattagaacataatttggaatttatatttatggcctcagaaaagggaatggcttattaaacaggagataaagaaac----agaaaagattgatatacgcaactacaatgaaattcataacttccattctctaaaagacaccataaagac-agtgaaataaacaaggctcaaaaggagataaaatatttaccgcacatgtaactgacatagattggaat-cataatacctaaattagtcctacaaaaagccaaagacaagctcatac--aaaatgggcataaaatttgaatatgaactta---aaggcaaaaatggataatccaataaacacatgaaaatgtttgccaattgaaatcatagaaataaaaacaaaaaccacagtgagatactacttcacatccatcagactgccaaaacgtgcaacgtctgacaatactgggagttataaaggatgtggaacaaga-aaacacttgtgtgctgtgggcgggagagtaaatttgcacacttgac-tagagcacaggg--------------------------------------------tggccgcatctcctaacactcgaga-ggacctggactttgatgtaaccattgcactccaagctgtgagacctagagaaacta--ttgcaggcgagcgtgaggtgacaggtacaatatcacagaaacagagtttgtaaaaataaataagtggaaacaaccaaaatgtgcattg--agtagaatggatgaatcaattcccgtatattagcataacaaaatactatcaggcagtaaaaattaatgaattacagtga i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168067567 1031 + 169853907 taaaatcaactaatgcaaaacaagaaaagc----ttcagaaacagactcagggcattatggaagtatta----ttttagacacaattaactttgcagatcagtgggggaaaggatgaacttcaacgaagagcagtgagacacttggttagccccaggaaaaaacacagtgaaattctatccttcctttgaactatacacaataattaagacaatcaaagtgaa----agaatacactattagaacataatttggaatttatatttatggcctcagaaaagggaatggcttattaaataggacataaagaaacacagagaaaagattgatatacgcagctacaatgaaattcgtaacttccgttcactaaaagacaccataaagac-agtgaaataaacaaggcgcaaaaggagataaagtatttgctacacatgtaactgacagagattggaat-cataatacataagttagtcctacaaaaagccaaagacaagctcatac--aaaatgtgcataaaatttgaatacaaactta---aaggcaaaaatggataatccaataaggatatgaaaatatttgccaattgaaatcatagaaataaaaacaaaaaccacaatgagatactacttaatgtccatcagactgccaaaatgtgcaatgtctgacaatactgggagttataaaggatgtggaacaaga-aaacacttgtgtgctgtgggcgggaaaataaatctgcacacttgac-tagagcacagggtggctgcatctcctaatactcgagaggacctggattttgacgtatggctgcatctcctaacactcgaga-ggacctggattttgacatagccattgcactccaagctgtgggacctagagaaacta--ttgcacatgagcgcgaggtgacaggtacaatatcacagaaacagagtttataaaaatacacaaggggaaacaaccaaaatgtgcattg--agtagaacggatgaattgattcccatatatcagcataacagaatactatcatgcagtaaaaattaatgaattacagtga i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169023407 1031 - 170955103 taaaatcaactaatgcaaaacaagaaaagc----ttcagaaacagactcagggcattatggaagtatta----ttttagacacaattaactttgcagatcagtgggggaaaggatgaacttcaacgaagagcagtgagacacttggttagccccaggaaaaaacacagtgaaattctatccttcctttgaactatacacaataattaagacaatcaaagtgaa----agaatacactattagaacataatttggaatttatatttatggcctcagaaaagggaatggcttattaaataggacataaagaaacacagagaaaagattgatatacgcagctacaatgaaattcgtaacttccgttcactaaaagacaccataaagac-agtgaaataaacaaggcacaaaaggagataaagtatttgctacacatgtaactgacagagattggaat-cataatacataagttagtcctacaaaaagccaaagacaagctcatac--aaaatgtgcataaaatttgaatacaaactta---aaggcaaaaatggataatccaataaggatatgaaaatatttgccaattgaaatcatagaaataaaaacaaaaaccacaatgagatactacttaacgtccatcagactgccaaaatgtgcaatgtctgacaatactgggagttataaaggatgtggaacaaga-aaacacttgtgtgctgtgggcgggaaaataaatctgcacacttgac-tagagcacagggtggctgcatctcctaaTACTCGAGAGGACCTGGATTTTGACGTATGGCTGCATCTCCTAACACTCGAGA-GGACCTGGATTTTgacatagccattgtactccaagctgtgggacctagagaaacta--ttgcacatgaacgcgaggtgacaggtacaatatcacagaaacagagtttataaaaatacacaaggggaaacaaccaaaatgtgcatcg--agtagaacggatgaattgattcccatatatcagcataacagaatactatcatgcagtaaaaattaatgaattacagtga i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163839663 987 + 165299245 TAAAGTCAACTAATGCAAAACAAGAAAAGC----TTCAGAAATAGACTCAGGGCATTATGGAAGTATTA----TTTTAGACACAATTAACTTTGCAGGTCAGTGGGGGAAAAGATGAACTTCAAGAAAGAGCAGTGAGACACTTGGTTAGCCCCAGGAAAAAACACAGTGAAATTCTATCCTTCCTTTGAACTATACACAATAATTAAGACAATCAAAGTGAA----AGAATACACTATTAGAACATaatttggaatttatatttatgGCCTCAGAAAAGGGAATGGCTTATTAAATAGGACataaagaaacacagagaaaagattGATATATGCGGCTACAATGAAATTCGTAACTTCCGTTCACTAAAAGACACCATAAAGAC-AGTGAAATAAACAAGGCACAAAAGGAGATAAAGTATTTGCTACACATGTAACTGACAGAGATTGGAAT-CATAATACATAAGTTAGTCCTACAAAAAGCCAAAGACAAGCTCATAC--AAAATGTGCATAAAATTTGAATACAAACTTA---AAGGCAAAAATGGATAatccaataagcatatgaaaatatttgccaattgaaatcatagaaataaaaacaaaaaccacaatgagatactacttaaCGTCCATCAGACTGCCAAAACGTGCAATGTTTGACAATACTGGGAGTTATAAAGGATGTGGAACAAGA-AAACACTTGTGTGCTGTGGGCGGGAGAATAAATCTGCACACTTGAC-TAGAGCACAGCG--------------------------------------------TGGCTGCATCTCCTAACACTCGAGA-GGACCTGGATTTTGACGTAGCCGTTGTACTCCAAGCTGTGGGACCTAGAGAAACTA--TTGCACATGAGCGCGAGGTGACAGGTACATCATCACAGAAACAGAgtttataaaaatacacaaggggaaacaaccaaaatgtgcATCG--AGTAGAACGGATGAATCGATTCCCATATATCGGCATAACAGAATACTATCATGcagtaaaaattaatgaattacaGTGA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96619527 986 + 98384682 taaaatcaactaatgcaaaacaagaaaagc----ttcagaaacagactcagggcattatggaagtatta----ttttagacacaattaactttgcagatcagtgggggaaagaatgaacttcaacaaagagcagtgagacacttggttagccccaggaaaaaacacagtgaaattctatccttcctttgaactatacacaataattaagacaatcaaagtgaa----agaatacactattagaacataatttggaatttatatttatggcctcaggaaagggaatggcttattaaacaggacataaagaaacacagagaaaagattgatatacgcagctacaacaaaattcgtaacttccgttcactaaaagacaccataaagac-agtgaaataaacaaggcacaaaaggagataaagtatttgctacacatgtaactgacagagattggaat-cataatacataaattagtcctacaaaaagccaaagacaagctcatac--aaaatgtgcataaaatttgaatatgaactta---aaggtaaaaatggttaatccaataaacatatgaaaatgtttgccaattgaaatcatagaaataaaaacaaaaaccacagtgagatgctacttcacatccatcagactgccaaaacgtgcaatgtctgacaatactgggagttataaaggatgtggaacaaga-aaacacttgtgtgctgtgggcgggagaataaatctgcacacttgac-tagagcacaggg--------------------------------------------tggctgcatctcctaacactccaga-ggacctggattttgacatagccgttgcactccaagctgtgggacctagagaaacta--ttgcacatgagcgcgaggtgacaggtacaatatcacagaaacagagtttataaaaatacacaaggggaaacaaccaaaatgtgcatcg--agtagaatggatgaatcgattcccatat-tcagcataacagaatactatcatgcagtaaaaattaatgaattacagtga i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169826118 971 + 171630274 taaaatcaacagacgcagaacaagaaaaac-----tcagaaacgcactcagggcattaaggaagtatta----tgtaagacagaattcactttgcagatcagtggggaaaaggatggatatcaacaaatagacgtgaaacccttggttagccccagggaaaaatacagtgaaattcgagctttcgtttgaactacacacagtaactaagacaatccaagtgaaagacagaatacgctattagaacataatttggaatttatatttatggcctcagaaaagggaatggcttattaaataggacataaa-aaacacagagaaaagattgatatatgcaactgcaatgagatttataacttctgttcactaaaa-acaccacag-----agtgaaataaataaggcacaaaatgagataaagtgt----cacacacgtaactgacgtagattggaatccataatacataaattattcctacaaaaagccaaaggccagctcatat--gaaatgagcataaaatttaaatgtgaactta---aaaagaagaatggatgctccaaaaaacatatgaaaatgtttgccaatttaaatcatagaaatataaacagaaaccacaatgagatgcaactccacacctgtcagactgccaaaacctacagtgtctgacaatcctgggccttataaaggatgtggagcagtg-aaacacgcgtgtgctgtaggcaggagagtgaatctg--cacctgac-tagagcacgatg--------------------------------------------tggccgcacctgctaa-gctcgaga-ggacctagacttcgacgcagcagtggcactccaagctatgggacacagagaagcta--cagcacatgcgtgtgaggtgacagacacagtattgcagaaacagagtttgtaaaaacagacaactggaaacaactgaaatgcgcctcg--actggaataaatgaataaattgccgtgaatgag-------gactactacagggcagtaacaatccgtgaattgtagTGA i calJac3.chr4 C 0 I 1342 s canFam3.chr1 56134932 979 + 122678785 aaaacttaacttatggaagctaataaaaaagaaatccagaaacagactcatagaatcagggaagtgctggtgtgttaagatagaatgaactttgcagattagtggaggaaaggatggactccagcagagagggctgaaacaatcggccatcctcagggaattaaagggagaaaatcta----tcccttgtgccatgaacagcaatttaaacaatgaatgtgaaagacggaattcactagtagaagataattcggaa-tcacattcatggcctcagggaaggaaatggtttatccaatgggacagaga-caccattgacataaagtgaatgtactcaactacagtgagattagtgacttctgttcactaagagacaccaaaaaaaagagtaaaataaataaggaataaaatgggacagaatatttgccacatatgtaagagacatccactggaatccttaataggtaaatcattcctacacaaagtaaaagccaagtcaataccaaaaaagtacataatgttccaatagaaatttaaagaagatgacactggattgtccaagtcacatgtgaaggtatttacaacctacaatcatagaaataaaaat-taaaccacaatgaaatactgttttaaattcctcaaattggcaaaacttacaac-tgcgacaatactgagagctgagaagaatacggagcaatagaaacatttgtgtgctgtgtgggggacagcaaattaacacaatcaccacagaacacaatg--------------------------------------------cgactccatctagtaacctttgagatgggcatggactttgatttagcggacacacttgcaggtaaggaac--agagaaaccatcttgcaaacg----------------tgcattatcgtggaagcactgcttgtgaaatcaaac--ctggaaacaacaaaaaggttcactgaaagcagaacagccaa--caaatctc-tatgttaacacaacagaa---tatgaggcaatgaacattaatgagtcccagctc i canFam3.chr1 C 0 C 0 e nomLeu3.chr3 156251705 0 + 157873769 C a score=239661.000000 s hg38.chr6_KB021644v2_alt 23170 124 + 185823 cccagagcaacatgaatgaatctgtgggatataatgtttagtcaaaagcaaattgcc-aacaattacactataattatgcagcataactccattcacatgcaatttaaaaatataaaacaccaag s panTro4.chr6 170637954 124 + 172623881 cccagagcaacatgaatgaatctgtgggatataatgtttagtcaaaagctaattgcc-aacaattacactataattatgcagcataactccattcacatgcaatttaaaaatataaaacaccaag i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172388500 123 + 174210431 cccagagcaacatgaacgaatctgtgggatataatgtttagtcaaaagc-aactgcc-aacaattacattataattatgcagtataactccatttacatgcaatttaaaaatataaaacaccaaa i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168068598 124 + 169853907 cccagagcaacatgaatgaatctgtgggacataatgtttagtcaaaagcaaattgcc-aacaattacattgtaattacgcagtatgagtccatttacatgcaatttaaaaatataaaacaccaaa i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169024438 124 - 170955103 cccagagcaacatgaatgaatctgtgggacataatgtttagtcaaaagcaaattgcc-aacaattacattgtaattacgcagtatgagtccatttacatgcaatttaaaaatataaaacaccaaa i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163840650 124 + 165299245 CCCAgagcaacatgaatgaatctgtgGGATATAATGTTCAGTCAAAAGTAAATTGCC-AACAATTACATTGTAATTATGCAGTACGAGTCCATTtacatgcaatttaaaaatataaaacaccaaA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96620513 124 + 98384682 cccagagcaacatgaatgaatctatgggatataatgttcagtcaaaagcaaattgcc-aacaattacattgtaattatgcagtacaagtccatttacatgcaatttaaaaatataaaacatcaaa i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56135911 116 + 122678785 tacaaaaccacaccgaggaatcc-tgggatgtgacattcagtcaaaagcgagttgtcaaacccttcca--------acacagtgctgctctgggtatattaaacttaaaaacacgatacaccggg i canFam3.chr1 C 0 I 2466 e calJac3.chr4 169827089 1342 + 171630274 I e nomLeu3.chr3 156251705 0 + 157873769 C a score=1712391.000000 s hg38.chr6_KB021644v2_alt 23294 1035 + 185823 tcatacattACTAATAATAAGTGGTGCCAatcataatccctaaagacaaaatcctgaatgccataatcccaaatgttgaaatcttgaaagattaaaattcctaaagtctaaattctaaaagtctaaaatccctaacatctaattgaatctccaaatcataatgacagatttgaaattaggtgtgatcaaagcctttaaaagcaaattttaaggggtgaccaataaagtttgttttttatgttcagtccagtgcattgggctggaaagccagctgagtggat-tggccacatgatacggcaatgaggaaacttcacttta--aaaatgcg------------------------------------tcatttgcctgcgttggcattccttccagccagtcgtcatttgcctgcattggcgttcctt----------------------------------------------ccagccagtcgtcatttgcctgcattggcg--------------------------------------------ttccttccagccagtcatcatttgcctgcattggcgttctttccagccaatgacactccaggagctcttcatgaattaaagccacatttgcctgcagaagccagtgaagttaccaactggctcaaaaataatcatattcagggtagggtgagaggatgcttacataatgatgctgctgtttgatcaatagcattgtttccaccaaatctgcggcctgtagatgagtgcaggcatcatggatgtccaggtatccaaagcaatgtaaaagcatgggacagaagatgggaaaatttaataggggattttcatgtcagtgaacgtcgaatcataggatttcaaaaagagcagtgccacatagaaaatgaatgtgaacatattctccaaggagagccatgtcctaaaagcaaaaagcagccactcattgagatgcaagacttcaaaacacagctcatggccctgaaagtcagccagatctaatgggttgtctccatgcaattgcccattgcccattcctgtcatatgctttttcatgtgtcaatttatttttagtttttccgtttttgtttctatgtttagttttcttttcccactctctttggttgtctgcattatttatta s panTro4.chr6 170638078 999 + 172623881 tcatacattACTAATAATAAGTGGTGCCAatcataatccctaaagacaaaatcctgaatgccataatcccaaatgttgaaatcttgaaagattaaaattcctaaagtctaaattctaaaagtctaaaatccctaacatctaattgaatctccaaatcataatgacagatttgaaattaggtgtgatcgaagcctttaaaagtaaattttaaggggcgaccaataaagtttgttttttgcgttcagtccagtgcattgggctggaaagccagctgagtggat-tggccacgtgatatggcaatgaggaaacttcacttta--aaaatg------------------------------------------------------------------------cgtcatttgcctgcattggcgttcctt----------------------------------------------ccagccagtcgtcatttgcctgcattggcg--------------------------------------------ttccttccagccagtcgtcatttgcctgcattggtgttctttccagccaatgacactccaggagctcttcatgaattaaagccacatttgcctgcagaagccagtgaagttaccaactggctcaaaaataatcatattcagggtagggtgagaggatgcttacataatgatgccgctgtttgatcaatagtattgtttccaccaaatctgcggcctgtagatgagtgcaggcatcatggatgtccaggtatccaaagcaatgtaaaagcatgggacagaagatgggaaaatttaataggggattttcatgtcagtgaatgttgaatcataggatttcaaaaagagcagtgccacatagaaaatgaatgtgaacatattctccaaggagagacatgtcctaaaagcaaaaagcagccactcattgagatgcaagatttcaaaacacagctcatggccctgaaagtcagccagatctaatgggttgtctccatgcaattgcccattgcccattcctgtcatatgctttttcatgtgtcaatttatttttagtttttccgtttttgtttctatgtttagttttcttttcccactctctttggttgtctgcattatttatta i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172388623 1071 + 174210431 tcataCATTACTAATAATAAGTGGTGCCAatcatgatccctaaagacaaaatcctgaatgccataatcccaaatgttgaaatcttgaaagattaaaattcttaaagtctaaattcgaaaagtctaaaatccctaacatctaattgaatctccaaatcataatgacagatttgaaattaggtgtgatgaaggcctttaaaagtaaattttaaggggtgaccaataaagtttgttttttacgttcagtccagtgcattgggctggaaagccagctgagtggat-tggccacgtgatacggcaatgaggaaacttcacttta--aaaatgcgtcattcgcctgcattggcgttccttccagcCAGTcatcatttgcctgcattggcgttccttccagcCAGTCGTCATTTGCCTGCATTGGTGTTCCTT----------------------------------------------CCAGCCAGTcgtcatttgcctgcattggca--------------------------------------------ttccttccagcCAGTcgtcatttgcctgcattggcgttctttccagccaatgacacttcaggagctcttcatgaattaaagccacattcacctgcagaagccagtgaagttaccaactggctcaaaaataatcatgttcagggtagggtgagaagacgcttacataatgatgctgctgttcgatcaacagtattgtttccaccaaatccaaggcctgtcgatgagtgcaggcatcatggatgtccaggtatccaaagcaacgtaaaagcatgggacagaagatgggaaaatttaataggggatgttcatgtcagtgcacgtcgaatcataggatttcaaaaagagcagcaccacatagaaaatgaatgtgaacgtattctccaaggagacccatatcctaaaagcggaaagcagccactcattgcgatgcaagacttcaaaacacagctcacggccctgaaagtcagccagatctaatgggttgtctccatgcaattgcccattgcccattcctgtcatatgctttttcatatgtcaatttacttttagtttttctgtttttgtttctatgtttagttttcttttcccactgtctttggttgtcagcattatttatta i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168068722 1112 + 169853907 tcatacattACTAATAATAAGTGGTGCCAatcgtaatccctaaagacaaaatcctgaatgccataacc-caaatgttgaaatcttgaaagattaaaattcctaaagtctaaattctaaaagtggaaaatccctaacatttgattgaatctccaaatcataatgacagattggaaattaggtgtgatcaagacctttaaaagtaaattttaaggagtgaccaataaagtttgttttttatgttcagtccagtgcattgggctggaaagtcaactgagtggat-tggccacgtgatatggcaatgaggaaacttcacttta--aaaatgtg------------------------------------tcatttgcctgcattggcatttcttccagcCAGTCGTCATTTGCCTGAGTTGGCGTTCCTTCCAGCCAGTCATCATTTGCCTG----------CATTGGCGTTCATTCCAGCCAGTCATCATTTACCTGCGTTGGCGTTCCTTCCGTCCTTCCAGCCAGTCATCATTTGCCTGCGTTGGCATTCCTTCCAGCCAGTcatcatttacccgtgttggcgttccttccggccaatgacactccaggagctcttcatgaattaaagccacgtttgcctgcagaagccagtgaagttgccaactggctcaaaaacaatcatgttcagggtagggtgagaagatgcttacacaacggtgctgctgttctgtcagcagtattgtttccaccaaatctgtggcctgttgatgagtgcaggcatcatggatgtccagctatccaaagcaacgtaaaagcatgggacagaagatgggaaaatgtaataggggattttcatgtcagtgcacgttgaatcacaggatttcaaaaagagcagcagcacaaagaaaatgaatgtgaacgtattcttcgaggagagccatgtcctaaaagcaaaaagcagccactcattgcgatgcaagacttcaaaataccgttcatggccctgaaagtcagccagatctaatgggctatctccatgcaattgcccattgcccattcctgtcatatgcattttcgtatgtcaatttatttttagtttttccattgt--tttctatgtttagttttcttttcccactatctttggttgtcagcattatttatta i rheMac3.chr4 C 0 I 10 s macFas5.chr4 169024562 1068 - 170955103 tcatacattACTAATAATAAGTGGTGCCAatcgtaatccctaaagacaaaatcctgaatgccataacc-caaatgttgaaatcttgaaagattaaaattcctaaagtctaaattctaaaagtggaaaatccctaacatttgattgaatctccaaatcataatgacagattggaaattaggtgtgatcaagacctttaaaagtaaattttaaggagtgaccaataaagtttgttttttatgttcagtccagtgcattgggctggaaagtcaactgagtggat-tggccacgtgatatggcaatgaggaaacttcacttta--aaaatatg------------------------------------tcatttgcctgcattggcatttcttccagcCAGTCGTCATTTGCCTGAGTTGGCGTTCCTTCCAGCCAGTCATCATTTGCCTG----------CATTGGCGTTCATTCCAGCCAGTCGTCATTTACCTGTGTTGGCG--------------------------------------------TTCCTTCCAGCCAGTcatcatttacccgtgttggcgttccttccggccaatgacactccaggagctcttcatgaattaaagccacgtttgcctgcagaagccagtgaagttgccaactggctcaaaaacaatcatgttcagggtagggtgagaagatgcttacacaacggtgctgctgttctgtcagcagtattgtttccaccaaatctgcggcctgttgatgagtgcaggcatcatggatgtccaggtatccaaagcaacgtaaaagcatgggacagaagatgggaaaatgtaataggggattttcatgtcagtgcacgttgaatcacaggatttcaaaaagagcagcagcacaaagaaaatgaatgtgaacgtattcttcaaggagagccatgtcctaaaagcaaaaagcagccactcattgcgatgcaagacttcaaaataccgttcatggccctgaaagtcagccagatctaatgggctatctccatgcaattgcccattgcccattcctgtcatatgcattttcgtatgtcaatttatttttagtttttccattgt--tttctatgtttagttttcttttcccactatctttggttgtcagcattatttatta i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163840774 1066 + 165299245 TCATACATTACTAATAATAAGTGGTGCCGATCATAATCCCTAAAGACAAAATCCTGAATGCCATAACC-CAAATGTTGAAATCTTGAAAGATTAAAATTCCTAAAGTCTAAATTCTAAAAGTGGAAAATCCCTAACATTTGATTGAATCTCCAAATCATAATGACAGATTTGAAATTAGGTGTGATCAAGacctttaaaagtaaattttaaggAGTGAccaataaagtttgttttttatgttCAGTCCAGTGCATTTGGCTGGTTGGTGTTCTGAGTGGCTGTGGTCACTTGACCT-GCGTTGAGGA---TTCCTTCCAGCAAAGTGTG------------------------------------TCATTTGCCTGCGTTGGCATTTCTTCCAGCCAGTCGTCATTTGCCTGCGTTGGCATTCCTTCCAGCCCGTCATCATTTACCTGCGTTGGTGTTCCTT----------CCAGCCTGTCGTCATTTACCTGCGTTGGCA--------------------------------------------TTCCTTCCAGCCAGTCGTCATTTACCTGCGTGGGCGTTCCTTCCAGCCAATGACACTCCAGGAGCTCTTCATGAATTAAAGCCACGTTTGCCTGCAGAAGCCAGTGAAGTTACCAACTGGCTCAAAAACAATCATGTTCAGGGTAGGGTGAGAAGTTGCTTACACAACGGTGCTGCTGTTCTGTCAGCAGTATTGTTTCCACCAAATCTGCAGCCTGTTGATGAGTGCAGGCATCATGGATGTCCAGGTATCCAAAGCAACATAAAAGCATGGGACAG-AGATGGGAAAATGTAATAGGGGATTTTCATGTCAGTGCACGCTGAATCACAGGATTTCAAAAAGAGCAGCACCAcatagaaaatgaatgtgaacGTATTCTTCAAGGACAGCCATGTCCTAAAAGCAAAAAGCAGCCACTCATTGCGATGCAAGACTTCAAAATACAGTTCATGGCCCTGAAAGTCAGCCAGATCTAACGGGTTGTCTCCATGCAATTGCCCATTGCCCGTTCCTGTGATATGCgttttcgtatgtcaatttatttttagtttttccattgt--tttctatgtttagttttcttttcccaCTATCTTTGGTTGTcagcattatttatta i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96620637 961 + 98384682 tcatacattACTAATAATAAGTGGTGCCggtcataatccctaaagacaaaatcctgaatgccataacctcaaatgttggaatcttgaaagattaaaattcctaaagtctaaattctaaaagtcgaaaatccctaacatctgattgaatctccaaatcataatgacagatttgaaattaggtgtgatcaagacctttaaaagtacattttaaggaatgaccaataaggtttgttttttacattcagtccagtgcattgggctggaaagccagttgagtggat-tggccacgtgatacggcactgaggaaacttcacttta--aaaatggg------------------------------------tgatttgcctgcattggggttcctt----------------------------------------------------------------------------------ccagccagtcgtcatttgcctgcgttggca--------------------------------------------ttccttccagccag------------------------------------tgacactccaggagctcttcatgaattaaagccacatttgcctgcagaagccagtgaagttaccaactggctcaaaaacaatcatgttcagggtaggataagaagatgcttacacaacggtgctgctgttctatcagcagtattgtttccaccaaatctgcggcctgttgatgagtgcaggcatcatggatgtccaggtatccaaagcaacgtaaaagcatgggacagaagatgggaaaatgtaataggggattttcatgtcagtgcacgttgaatcacaggatttcaaaaagagcagcaccacgtagaaaatgaatgtgaacgtattcttcaaggacagccatgtcctaaaagcaaaaagcagccactcattgcgatgtaagacttcaaaatacagttcatggccctgaaagtcagccagatctaacgcgttgtctccatgcaattgcccattgcccgttcctgtgatatgcatttttgtatgtcaatttatttttagtttttccatttt--tttctatgtttagtttccttttcccactatctttggttgtcagcgttatttatta i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169827089 1342 + 171630274 I e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C a score=6712.000000 s hg38.chr6_KB021644v2_alt 24329 7 + 185823 gaattta s panTro4.chr6 170639077 7 + 172623881 gaattta i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172389694 7 + 174210431 gaattta i ponAbe2.chr6 C 0 C 0 s macFas5.chr4 169025630 7 - 170955103 tcattta i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163841840 7 + 165299245 taattta i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96621598 7 + 98384682 taattta i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169827089 1342 + 171630274 I e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C e rheMac3.chr4 168069834 10 + 169853907 I a score=1146.000000 s hg38.chr6_KB021644v2_alt 24336 2 + 185823 ct s panTro4.chr6 170639084 2 + 172623881 ct i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172389701 2 + 174210431 ct i ponAbe2.chr6 C 0 C 0 s chlSab2.chr13 96621605 2 + 98384682 ct i chlSab2.chr13 C 0 I 1 e calJac3.chr4 169827089 1342 + 171630274 I e canFam3.chr1 56136027 2466 + 122678785 I e papAnu2.chr4 163841847 0 + 165299245 C e nomLeu3.chr3 156251705 0 + 157873769 C e rheMac3.chr4 168069834 10 + 169853907 I e macFas5.chr4 169025637 0 - 170955103 C a score=77408.000000 s hg38.chr6_KB021644v2_alt 24338 298 + 185823 atgcattgaggctgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcacgaggtcaagagatcgagaccatcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaaaatagctgggcatggtggtggacgcctgtagtcccagctgcttgggaggctgaggcaggagaatggcatgaacctgggaggcagagcttgcaatgagccgagatggcaccactgcactccagcctgggcaacagagcgagactctgtctcaaaaaaaa s panTro4.chr6 170639086 298 + 172623881 atgTATTGAggctgggcacggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggtggatcacgaggtcaagagatcgagaccatcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaaaatagctgggcatggtggtggacgcctgtagtcccagctgcttgggaggctgaggcaggagaatggcatgaacctgggaggcggagcttgcagtgagccgagatggcaccactgcactccagcctgggcaacagagcgagactctgtctcaaaaaaaa i panTro4.chr6 C 0 I 3 s ponAbe2.chr6 172389703 298 + 174210431 atgtattgaggccgggcgtggtggctcatgcctgtaatcccaacactttgggaggctgaggcaagtagatcatgaggtcaagagatcaagaccatcctggccaacatggtgaaaccgcgtctctactaaaaatacaaaaaaatagctgggtgtggtggcaggcacctctagtcccagctacttgggaggctgaggcaggagaatggcatgaacccgggaggtggagcttgcagtgaacagagatcgcaccactgcactccagcctgggcaacagagcaagactctgtctcaaaaaaaa i ponAbe2.chr6 C 0 C 0 e calJac3.chr4 169827089 1342 + 171630274 I e canFam3.chr1 56136027 2466 + 122678785 I e chlSab2.chr13 96621607 1 + 98384682 I e papAnu2.chr4 163841847 0 + 165299245 C e nomLeu3.chr3 156251705 0 + 157873769 C e rheMac3.chr4 168069834 10 + 169853907 I e macFas5.chr4 169025637 0 - 170955103 C a score=1001.000000 s hg38.chr6_KB021644v2_alt 24636 11 + 185823 aaaaaaaaaaa s ponAbe2.chr6 172390001 11 + 174210431 aaaaaaaaaaa i ponAbe2.chr6 C 0 C 0 e calJac3.chr4 169827089 1342 + 171630274 I e canFam3.chr1 56136027 2466 + 122678785 I e chlSab2.chr13 96621607 1 + 98384682 I e papAnu2.chr4 163841847 0 + 165299245 C e nomLeu3.chr3 156251705 0 + 157873769 C e rheMac3.chr4 168069834 10 + 169853907 I e macFas5.chr4 169025637 0 - 170955103 C e panTro4.chr6 170639384 3 + 172623881 I a score=2713.000000 s hg38.chr6_KB021644v2_alt 24647 18 + 185823 agaatttactaagtattt s ponAbe2.chr6 172390012 18 + 174210431 aagatttactatgtattt i ponAbe2.chr6 C 0 C 0 s calJac3.chr4 169828431 18 + 171630274 agaacgtactgtctattt i calJac3.chr4 I 1342 C 0 e canFam3.chr1 56136027 2466 + 122678785 I e chlSab2.chr13 96621607 1 + 98384682 I e papAnu2.chr4 163841847 0 + 165299245 C e nomLeu3.chr3 156251705 0 + 157873769 C e rheMac3.chr4 168069834 10 + 169853907 I e macFas5.chr4 169025637 0 - 170955103 C e panTro4.chr6 170639384 3 + 172623881 I a score=2097.000000 s hg38.chr6_KB021644v2_alt 24665 3 + 185823 ctt s ponAbe2.chr6 172390030 3 + 174210431 ctt i ponAbe2.chr6 C 0 C 0 s macFas5.chr4 169025637 3 - 170955103 ctc i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163841847 3 + 165299245 ctc i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169828449 3 + 171630274 ctt i calJac3.chr4 C 0 C 0 e canFam3.chr1 56136027 2466 + 122678785 I e chlSab2.chr13 96621607 1 + 98384682 I e nomLeu3.chr3 156251705 0 + 157873769 C e rheMac3.chr4 168069834 10 + 169853907 I e panTro4.chr6 170639384 3 + 172623881 I a score=1640359.000000 s hg38.chr6_KB021644v2_alt 24668 1062 + 185823 cttcacatcatttctaatactggaggtataaattgtgtgaagacttctaattcatattatgccg-tttttgcaaatttgactccacaaaactgcattcctgcaacattgacttagtgtacaagcatcgtgctgtatggaaaggtgttgaaacttc-ctgaataaataaggagatgtcctttgtgtacatctgcatttgtgagagagaaactttctggagatctcagctctttgggcagctgcatgtgagctggtggtgacccgttgctgttctgatctcctcaacacacttgggttgtccctcacggtgttccagatgcccacaaatgtagagctgggtgcccacacaatcaccaacctcggcgctatgcatttacacagttcccttttgaccgattcctttatgaacactctttgtctgttcataCACCTGCTCATAGCTGTTTTACCTGTGTATAAGCAATAGTGCGTGA-TATAATTTCAAAGGAAGACATTTTGAGTAGTGAATACAAGCAGGTTACAGAGAATACGGTGCAGTGAGATTCCATTTGATATAAAAATGTAAATATATGTACGGAAAGGTTgagaaggagagaaat-gaaacagaaagggagagaaagagagaaacggacagatgaagaccaggataaaggagaaCCGGAGAGGACTGAAAACATAGTTCTATTCCCGGCAGGGTCTCTGGGTGGTGGAATTGAGAAAACAATTGTTTCCGCTAGTTGCTCGTTTTGAAATTAGTAATTCACAGGTTTTTCTCAGTTATCTCCTATTAAAAGTTTTAATGGggctgggtatggtggctcatgcctataatcccagcactttgggaggctgaggcgggtgggtcatttgaggtcagaagtttgagatctgtctgaccaacatggtgggactccatctctact-aaaatacaaaaattagccaggcattgtacctcacgcctgtaatcccagctcctcaggaagctgaggcaggagaatcacttgaacccgggagacagaggttgcagtgagccaggatcacaccactgcactctggcctgggcga s ponAbe2.chr6 172390033 1059 + 174210431 cttcacgtcgtttctaatactggaggtataagttgtgtaaagacttctaattcttattatgctg-tttttgcaaatttgactccacaaaactttattactacaacattgacttagtgtgtaagcattgtgctgtatgggaaggtgttgaaacttctctg--taaatgaggagatgtcctttttgtacatctgcatttgtgagagagaaactttctcgagatctcagccctttggccagctgcatgtgagctggtggtgaccccttgcagttctgatctcctcaacacactcgggttgtccctcacggtgttccagatgcccccaggtgtagatctgggtgcccaca--atcaccgacctcagtgctatgcatttacacagttccctttttaccgatttctttatgaatacacttcatctgttcatacacctgctcatagctgttatacctgtgtATAAGCAGCAGTGTGTGA-TATAATTTCAAAGGAAGACATTTTGAGTAGTGAATACAAGCAGGTTACAGAGAATACGGTGCAGTAAGATTCCATTTGCTATAAAAATGTAAATATATGTCTGGAAATGTTgagaaggagagaaat-gaaacagaaaaggagagaaagagagaaacagacagaCGAAAACCAGGATAAAGGAGAACCGGAGAGGACTGAAAACATAGTTCTATTCCCAGCAGGGTCTCTGGTTGGTGGAATTGAGAAAACAATTGTTTCCGCTAGTTGCTCATTTTGAAATTAGTAATTCACAGGTTTTTATCAATTATCTCCTATTAAAAGTTTTAATAGGTctgggcgtggtggctcatgcctataatctcagcactttgggaggctgaggcaggtgggtcatttgaggtcagaagtttgagagctgtctgaccaacatggtgggactccatctctact-aaaatacaaaaattagctgggcgttgtccctcacgcctgtaatcccagctcctcaggaagctgaggcaggagaatcacttgaacctgggagacagaggttgcagtgagccaggatcgcaccactgcactccagcctgggcga i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168069844 1052 + 169853907 cttcacatcatttctaatactggaggtatccattgtgtaaagacttctaattcatattatgcta-tttttgcaaatttgactcca-aaaaattcattactacaacactgacttagtgtgtaaggattgtgctgtatgggaaagcattgaaacttc-cttcataaataaggaga-gtcctttttgtacatctgcatctgtgacagagaaactttctggagatctcagctctttgggcagctgcatgtgagctggtggtgacccgttgcagttctgat---ctcaacacactcgggttgtccctcatggtgtttcagatgcccacaggtgtacagctgggtgcccaca--atcactagcctcggcgttatgcatttacacagttctcttttgaccgttt-ctttatgagtacactt----tgttcatacgcctgcttatagccgttatacctgtgGATAAGCAACAGTGCACGATTATAATTTCAAAGGGAGACATTTTGAGTAGTGAATACAAGCAGGTTACAGAGAATAGGGTGCAGTAAGATTCCATTTGATATAAAAATGTAAATATGTGTCTGGAAAGGTTgagaaggagagaaat-gaaacagaaagagagagaaagagagaaacggacagaTGAAGACCAGGATAAAGGAGAACTGGAGAGGACTGAAACTATAGTTCTACTCCCAGCAGGGTCTCTGGGTGGTGGAATTGAGAAAACAATTGTCCCCACTAGTTGCTCATTTTGAAATTAGTAATTCACAGATTTTTATCAATTATCTCCTATTAAAAGTTTTCATGGggctgggcgtggtggctcatgcctgtaatcccagcactttgggagactgaggcgggtgggtcacttgagctcagaagtttgagatcagcctgaccaacatggtgggactccgtctctactgaaaatacaaaaattagccgggcattgtgcctcatgtccgtaatcccagctcctcaggaagcagaggcaggagaatcacttgaacctgagaaacagaggttgcagtgagccaggatcacaccaccgcactccagcctggggta i rheMac3.chr4 I 10 I 77 s macFas5.chr4 169025640 1052 - 170955103 cttcacatcatttctaatactggaggtatccattgtgtaaagacttctaattcatattatgcta-tttttgcaaatttgactcca-aaaaattcattactacaacattgacttagtgtgtaaggattgtgctgtatgggaaagcattgaaacttc-cttcataaataaggaga-gtcctttttgtacatctgcatctgtgacagagaaactttctggagatctcagctctttgggcagctgcatgtgagctggtggtgacccgttgcagttctgat---ctcaacacactcgggttgtccctcatggtgttccagacgcctacaggtgtacagctgggtgcccaca--atcactagcctcagcgttatgcatttacacagttctcttttgaccgttt-ctttatgagtacactt----tgttcatacgcctgcttatagccgttatacctgtgGATAAGCAACAGTGCATGATTATAATTTCAAAGGGAGACATTTTGAGTAGTGAATACAAGCAGGTTACAGAGAATAGGGTGCAGTAAGATTCCATTTGATATAAAAATGTAAATATGTGTATGGAAAGGTTgagaaggagagaaat-gaaacagaaagagagagaaagagagaaacggacagatgaagaccaggataaaggagaactagagagGACTGAAACTATAGTTCTACTCCCAGCAGGGTCTCTGGGTGGTGGAATTGAGAAAACAATTGTCCCCACTAGTTGCTCATTTTGAAATTAGTAATTCACAGATTTTTATCAATTATCTCCTATTAAAAGTTTTCATGGggctgggcgtggtggctcatgcctgtaatcccagcactttgggagactgaggcgggtgggtcatttgagctcagaagtttgagatcagcctgaccaacatggtgggactccgtctctactgaaaatacaaaaattagccgggcattgtgcctcatgtccgtaatcccagctcctcaggaagcagaggcaggagaatcacttgaacctgagaaacagaggttgcagtgagccaggatcacaccaccgcactccagcctgggcga i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163841850 1059 + 165299245 CTTCACATCATTTCTAATACTGGAGGTATCCATTGTGTAAACACTTCTAATTCATATTATGCta-tttttgcaaatttgactCCA-AAAAATTCATTACTACAACATTGACTTAGTGTGTAAGGATTGTGCTGTATGGGAAAGCGTTGAAACTTC-CTTAATAAATAAGGATA-GTCCTTTTTGTACATCTGCATTTGTGACAGAGAAACTTTCTGgagatctcagctctttgggcAGCTGCATGTGAGCTGGTGGTGACCCGTTGCAGTTCTGATCTCCTCAACACACTCGGGTTGTCCCTCATGGTGTTCCAGACGCCCACAGGTGTACAGCTGGGCGCCCACA--ATCACTAGCCTCAGCGTTATGCATTTACACAGTTCTCTTTTGACCGATT-CTTTATGAGTACACTTTGTCTGTTCATACGCCTGCTTATAGCTGTTATACCTGTGGATAAGCAACAGTGCATGATTATAATTTCAAAGGGAGACATTTTGAGTAGTGAATACAAGCAGGTTACAGAGAATAGGGTGCAGTAAGATTCCatttgatataaaaatgtaaatatgtgtatGGAAAGGTtgagaaggagagaaat-gaaacagaaagggagagaaagagagaaacggacagatgaagaCCAGGATAAAGGAGAACTGGAGAGGACTGAAAATATAGTTCTACTCCCAGCAGGGTCTCTGGGTGGTGGAATTGAGAAAACAATTGTCCCCACTAGTTGCtcattttgaaattaataattCACAGATTTTTGTCAATTATCTCCTATTAAAAGTTTtcatggggctgggcgtggtggctcatgcctgtaattccagcactttgggagactgaggcgggtgggtctTTTGcactcagaagtttgagatcagcctgactaacatggtggtactccgtctctactgaaaatataaaaattagccgggcattgtgcctcacgtcagtaatcccagctcctcaggaagcggaggcaggagaatcacttgaacctgagagacagaggttgcagtgagccaggatcacgccactgcactccagcctgggtga i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96621608 1056 + 98384682 cttcacatcatttctaatactggaggtatccattgtgtaaagacttctaattcatattatgctattttttgcaaatttgactcca-aaaaattcattactacaacattgacttagtgtgtaaggattgtgctgtatgggaaagcattgaaacttc-cttaataaataaggaga-gtcctttttgtacatctgcatttgtgacagagaaactttctggagatctcagctctttgggcatctgcatgtgagctggtggtgacccgttgcagttctgatctcctcaacacactcgggttgtccctcatggtgttccagacgcctacaggtgtacagctgggtgcccaca--atcaccagcctcagcgttatgcatttacacagttcccttttgaccgatt-ctttatgagtacactttgtctgttcatacacctgctcatagctgttataccTGTAGATAAGCAACAGTGCATGATTATAATTTCAAAGGACGACATTTTGAGTAGTGAAATCAAGCAGGTTACAGAGAATCGGGTGCAGTAAGATTCCATTTGATATAAAAATGTAAATATGTGTATGGAAAGGTTG---AGGagagaaat-gaaacagaaagggagagaaagagagaaacggacagatgaagaccaggataaaggagaGTTGGAGAGGACTGAAAACATAGTTCTACTCCCAGCAGGGTCTCTGGGTAGTGGAATTGAGAAAACAATTGTCCCCACTAGTTGCTCGTTTTGAAATTAGTAATTCACAGATTTTTATCAATTATCTCCTATTAAAAGTTTTAATGGggctggacgtggtggctcatgcctgtaatcccagcactttgggagactgaggcgggtgggtcatttgagcttagaagtttgagatcagcctgaccaacatggtggggctccgtctctactgaaaatacaaaaattagcctggcgttgtgcctcaagtctgtaatcccagctcctcaggaagcggaggcaggagaatcacttgaa-ctgagaaacagaggttgcagtgagccaggatcatgccactgcactccagcctgggtga i chlSab2.chr13 I 1 C 0 s calJac3.chr4 169828452 997 + 171630274 cttcacatca-ctctgataccgcaggtgcaaattgcg--gagacttctaattcacagtaggcgg-tgtttgcaaatctgactccacaaaaccgcatgactcccatacagactcagtgtgtgagcattgtgctgcatgggaaag-accgaaatctc-cttaataaagaaggggacgtcctttatctacatctgcatttgtgagagagaaactttctcgagagctcagctctttgggcggctgca-------------------------gttctgatctcctcagcaccctcg-------------ggcgttccagacgaccacgggcgtagagctgggtgcccaca--atcaccaagctcagcgctgtgcgttcactcagttc-cttttgacccatttctttaggaatacactttgtctgttGACACGCCTGCG-GTGACTGTTTCACCTGTGTATAAGCAATGGTCTGTGA-CATAATTTAAAAGGAAGACATTTTGAGCACTGAGTACACACTGGCTTCAGTGGACGGGGTGCAGTCGGATTCCATTTCATATAAACATGGAAATATATGTAT-GAAAGATTGAGCAGGAGAGACATAGGAGCAGAAAGGGAGAGGAAGAGAGAAATGGACAGATGAAGACCAGGATAAAGGAGAGTGGGAGTGGGCTGAGAACATAGTTCTGTTACCAACAGGGTCTCCGGGTGGTGGGATTGAGAAAGCAATTGTCCCTGCTGGTTGCTCGTTCTTTAGTCAGTAATTCACAGATTTTTCTCAAGTATCTCCTATCAAAGG-TTTAATGGgaccaggcacggtggctc------------ccagcagtttgggaggccgaggtgggcagatcatttgaggtcaggagcttgagaccagcctgaccaacatggtaaga--ccgtctctact---aatac-aaaattagctgggtgtggtggct-aagcctgttatcccacctactcaggaggctgaggcaagagaatcacttgaatccaggaggcggatgttgcagtgagctggaattgagccactgcactccagcctgggcaa i calJac3.chr4 C 0 C 0 e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C e panTro4.chr6 170639384 3 + 172623881 I a score=6228.000000 s hg38.chr6_KB021644v2_alt 25730 9 + 185823 ccgagtgag s ponAbe2.chr6 172391092 9 + 174210431 ctgagtgag i ponAbe2.chr6 C 0 C 0 s macFas5.chr4 169026692 9 - 170955103 ctgagtgag i macFas5.chr4 C 0 I 61 s papAnu2.chr4 163842909 9 + 165299245 ctgagtgag i papAnu2.chr4 C 0 I 58 s chlSab2.chr13 96622664 9 + 98384682 ctgagtgag i chlSab2.chr13 C 0 I 73 s calJac3.chr4 169829449 3 + 171630274 ccg------ i calJac3.chr4 C 0 C 0 e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C e rheMac3.chr4 168070896 77 + 169853907 I e panTro4.chr6 170639384 3 + 172623881 I a score=511423.000000 s hg38.chr6_KB021644v2_alt 25739 377 + 185823 agtgaga---ctcctcaaaaaaaaaaagaaaaaGTTTTAATAAGGAATAGAGCATAACAAAGCAGGAGCTAAGTGAGTGAGAACTGTTTCCACTGGAAGCCCAGCATCGTCAGCAGCAAGTGCCTCTTTAGGAGGCAAAGTTCCAGCCAAAGTCAGGGCCAAAGGTAACAGCAGACCTGGCATACTATGTGATTTTTAAGCTGTTTGTTGTCTCTC--ATCTCTCTTTATCCAATAGGAGATACAAGTGTTTTTTGTTTGTTTGtttttaaattttt-ttaa--------------------------------------------------------------------------------aaagtagagatggagttttgtcatgtt-gctcagtctggtcttgaaatcctggacttaagtga-tcatcctgtctcagcctccaaaagtgctgagattacagg s ponAbe2.chr6 172391101 374 + 174210431 actc------catctcaaaaaaaaaaaaaaaaaGTTTTAATAAGGAATAGAGCATAACAAAGCAGGAGCTAAGTGAGTGAGAACTGTTTCCACTGGAAGCCCAGCATCATCAGCAGCAAGTGCCTCTTTAGAAGGCAAAGTTCCAGCCAAGGTCAGGGACAAAGGTAACAGCAGACCCTGCATACTATGTGATTTTTAAGCTGTTTGTTGTCTCTCTCATCTCTCTTTATCCCATAGGAGATACAAGTGTTTTTTTGTT--TTGtttttaaattttt-ttaa--------------------------------------------------------------------------------aaagtagagatggagttttgccatatt-gctcagtctagtcttgaaatcctggacttaagtga-tcatcctgtctcagcctccaaaagtgctgagattacagg i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168070973 373 + 169853907 agtgagactccatctcaaaaagaa----aaaTAGTTTTAACAAGGAATAGAGCATGACAAAGCAGG-GCTAAGTAAGTGAGAACCGTCTCCACTGGA-----AGCATCGTCAGCAGCAAGTGCTTCTTTAGGAGACAAAGTTCCAGCCAAAGTCAGGGCCAAAGGTAACAGCAGACTCTGCGTACTATGTGATTTTTAAGCTGTTTGTCATCTCTCTCATCTCTCTTTATCCAATAGGAGATACAAGTGATTTTTGTTTGTTTGCttttaaattttttttaa--------------------------------------------------------------------------------aaagtagacatggagttttgccatgtt-gctcagtctggtcttgaactcctggacttaagtga-tcatcctgtcgcaacctccaaaagtgctgagattatagg i rheMac3.chr4 I 77 C 0 s macFas5.chr4 169026762 373 - 170955103 agtgagactccatctcaaaaagaa----aaaTAGTTTTAACAAGGAATAGAGCATGACAAAGCAGG-GCTAAGTAAGTGAGAACCGTCTCCACTGGA-----AGCATCGTCAGCAGCAAGTGCTTCTTTAGGAGACAAAGTTCCAGCCAAAGTCAGGGCCAAAGGTAACAGCAGACTCTGCGTACTATGTGATTTTTAAGCTGTTTGTCATCTCTCTCATCTCTCTTTATCCAATAGGAGATACAAGTGATTTTTGTTTGTTTGCTTTAAAATTTTTTTTAA--------------------------------------------------------------------------------AAAgtagagatggagttttgccatgtt-gctcagtctggtcttgaactcctggacttaagtga-tcatcctgtctcagcctccaaaagtgctgagattatagg i macFas5.chr4 I 61 C 0 s papAnu2.chr4 163842976 434 + 165299245 agtgagactccatctcaaaaagaa----aaaaagttttaataaggAATAGAGCATGACAACGCAGG-GCTAAGTAAATGAGAACTGTCTCCACTGGA-----AGCATTGTCAGCAGCAAGTGCTTCTTTGGGAGACAAAGTTCCAGCCAAAGTCAGGGCCAAAGGTAACAGCAGACTCTGCGTACTATGTGATTTTTAAGCTGTTTGTCgtctctctcatttctctttatcca-------atacaagtgttttttgtttgtttgcttttaaatttttgttaaaatttaaaaaatttttaaataaaaataattaaaattaaaaat-----------taaaaattaaattttttttttttttttaaagtagagatggagttttgccatgtt-gctcagtctggtcttgagctcctggac-taaGTGa-tcatcctgtctcagcctccaaaagtgctgagattacagg i papAnu2.chr4 I 58 C 0 s chlSab2.chr13 96622746 432 + 98384682 agtgagactccatctcaaaaagaa----aaaCAGTTTTAATAAAGAATAGAGCATGACAAAGCAGG-GCTAAGTAAGTGAGAACCCTCTCCACTGGA-----GGCATCGTCAGCAGCAAGTGCTTCTTTAGGAGACAAAGTTCCAGCCAAAGTCAGGGCCAAAGGTAACGGCAGACTCTGCGTACTATGTGATTTTTAAGCTGTTTGTCGTCTCTCTCATCTCTCTTTATCCA-------ATACAAGTGTTTTTTGTTTGTTTGCTTTTAAATTTTTTTTAA-ATTAAAaaaattttaaaataaaaataatta-----------aaattaaaaattaaaaattaaattttttttttttta--aaagtagagatggagtttttccatgtt-gctcagtctggtcttgaactcctggacttaagtga-tcatcctgtctcagcctccaaaagtgctgagattacagg i chlSab2.chr13 I 73 C 0 s calJac3.chr4 169829452 399 + 171630274 agtgagactccatctcacacaaa-----aaCCAGTTGTAATAAGGAATACAGCATAACACAGCAGTGGCTGAGTGCGTGA-AACTATTCCCAGTGGAAACCCAGCATCTTCAGCAAC-AGCGACTCTTTAGGAGGCAAAGTTCCAGCCGAGGTCAGGGCCAAAGGTACCAGCAGCCCCTGCATCCTATGTGATTTTAAAGCTGTTTGTCACCGCTCTCATCTCTCTTTATCCAACAGGAGATACAAGTGttttttgtttgtttatttt--attttattttga---------------------------------------------------------gacggagtttcactcttgttaccaaggctggagtgcaatggcgcgatctcggctcaccgaaacctctgcctcctgggttcaggcaatttctcctgcctcagcctcctgagtagctgggattacagg i calJac3.chr4 C 0 I 926 e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C e panTro4.chr6 170639384 3 + 172623881 I a score=22323.000000 s hg38.chr6_KB021644v2_alt 26116 17 + 185823 cgtgagacactgcgtct s ponAbe2.chr6 172391475 17 + 174210431 tgtgagacactgcgtct i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168071346 17 + 169853907 cgtgaggcactgcgtct i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169027135 17 - 170955103 cgtgaggcactgcgtct i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163843410 17 + 165299245 cgtgaggcactgcgtcT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96623178 17 + 98384682 cgtgaggcactacgtct i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169829851 926 + 171630274 I e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C e panTro4.chr6 170639384 3 + 172623881 I a score=29811.000000 s hg38.chr6_KB021644v2_alt 26133 18 + 185823 ggccCCAGAAACAAGTGC s ponAbe2.chr6 172391492 18 + 174210431 ggcCCCAGAAACAAGTGC i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168071363 18 + 169853907 ggccCCAGAAACAAGTGC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169027152 18 - 170955103 ggccCCAGAAACAAGTGC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163843427 18 + 165299245 GGCCCCAGAAACAAGTGC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96623195 18 + 98384682 ggccCCAGAAACAAGTGC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169830777 18 + 171630274 GGCCAGAGATACCAGCGT i calJac3.chr4 I 926 C 0 e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C e panTro4.chr6 170639384 3 + 172623881 I a score=1189895.000000 s hg38.chr6_KB021644v2_alt 26151 543 + 185823 TGGGCACAGTGGAATGGCACGCCAAGGTGTGGAGGCC---GGAGGTCAGTATCCATCTGCACAGGTTTAGGGGAAAGTTGCCCAACACACTAAAGGCCACTGCACAAGACAACTGTCTCTTTATGGTCCCAGCAACTTTATGGCTCCAGCTGACCTGCATGGCCATGTGTCATGTTACACATTACGGCTGGCATGACCCCTCCACAGCCATGTTTAGTCAGGACTGGAGAGCATGGATTCCCTCCAGCACCCAGTTGAGTCTTGTTTGTATCAACACAGATGTGCATGCTGGAGACAGCCCCTACTTTCTTAACAGTCCCAGCAGCTGGGCACAGATCCAGACATCAGCACTGCTGGGAACGGCAGGCCAAGCCGGGCACGCAGTAGGGCCTGTGCCTTGCTCTGGGTGTCCTGTCGTGCG--GTGGAGGGTAGCCTCCAGGCAGATCGCCATCCTTGGCACGACCACTGCAGGTCATTTCACACTGGGGCCCCTGTGGTCTTGCATTTCCTCTCCCATCTTTGAGCACATTATAAAAAGTTCTTTGT s panTro4.chr6 170639387 543 + 172623881 TGGGCACAGTGGAATGGCACGCCAAGGTGTGGAGGCC---GGAGGTCAGCATCCATCTGCACAGGTTTAGGGGAAAGTTGCCCAACACACCAAAGGCCACTGCACAAGACAACTGTCTCTTTATGGTCCCAGCAACTTTATGGCTCCAGCTGACCTGCACGGCCATGTGTCATGTTACACATTACGGCTGGCATGACCCCTCCGCAGCCATGTTTAGTCAGGACTAGAGAGCATGGATTCCCTCCAGCACCCAGTTGAGTCTTGTTTGTATCAACACAGATGTGCATGCTGGAGACAGCCCCTACTTTCTTAACAGTCCCAGCAGCTGGGCACAGATCCAGACATCAGCACTGCTGGGAACGGCAGGCCAAGCCGGGCACGCAGTAGGGCCTGTGCCTTGCTCTGGGTGTCCTGTCGTGCG--GTGGAGGGTAGCCTCCAGGCAGATCGCCATCCTTGGCACGACCACTGCAGGTCATTTCACACTGGGGCCCCTGTGGTCTTGCATTTCCTCTCCCATCTTTGAGCACATTATAAAAAGTTCTTTGT i panTro4.chr6 I 3 C 0 s ponAbe2.chr6 172391510 543 + 174210431 TAAGCACAGTGGAATGGCACGCCAAAGTGTGGAGGCC---AGAGGTCAGTATCCACCTGCACAGGTTTAGGGGAAAGTTGCCCAACACACCAAAGGCGATTGCACAAGACAACTGTCTCTTTATGGGCCCAGCAACTTTATGGCTCCAGCTGACCTGCACGGCCATGTGTCATGTTACATATCAGGGTTGGCATGACCCCTCTGCAGCCGTGTTTAGTCAGGACTGGAGAGCATGGATTCACTCCAGCACCCAGTTGAGTCTTGTTTGTATCAACACAGATGTGCATGCTGGAGACAGCACCTACTTTCTTATCAGTCCCAGCAGCTGGGCACAGATCCAGACATTAGCACTGCTGGGAACGGCAGGCCAAGCCGGGCACACAGTAGGGCCTGTGCCTTGCTCTGGGTGTCCTGTCGTGCA--GTGGAGGGTAGACTCCAGGCAGATCGTCATCCTTGGTGCGACCACCGCAGGTCATTTCACACTGGGGTCCCTGTGGTCTTGCATTTCCTCTCCCATCTTTGAGCACATTATAAAAAGTTCTTTGT i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168071381 546 + 169853907 TGAGCACAGTGGAATGGCATGCCAAGGTGTGGGGGCCAGAGGAGGTCAGTATCCTTCTGCACAGGTTTAGGGGAAAGTTGCCCAACACACCAAAGGCCACTGCACAAGACAACTGTCTCTTTATGATCCCAGCAACATTATGACTGCAGCTGACCTGCACGGCCATGTGTTATGTTATACATCAGGGCTGGCATGAGCCCTCTGCAGCTGTGTTTAGTCAGGACTAGAGAGCATGGTTTCACTCCAGCACCCAGTTGAGTCTTGTTTGTATCAATACAGATGTGCATGCTGGAGACAGCCCCTACTTTCTTATCAGCCTCAGCACCTGGGCACAGATCCAGACATCAGCGCTGTTGGGAACAGCAGGCCAAGCCAGGCACGCAGTGGGACCTGTGCCTCACTCTAGGTGTCCTGTCGTGCG--GTGGAGGGTAGCCTCCAAGCAGACCACCATCCTGGATGCGACCACTGCAGGTCATTTCACACTGGGATCCCTGTGGTCTTGCATTTCCTCTCCCATCTTTGAGCACATGTTAAAAAGTTATCTGT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169027170 546 - 170955103 TGAGCACAGTGGAATGGCATGCCAAGGTGTGGGGGCCAGAGGAGGTCAGTATCCTCCTGCACAGGTTTAGGGGAAAGTTGCCCAACACACCAAAGGCCACTGCACAAGACAACTGTCTCTTTATGATCCCAGCAACATTATGACTGCAGCTGACCTGCACGGCCATGTGTTATGTTATACATCAGGGCTGGCATGAGCCCTCTGCAGCTGTGTTTAGTCAGGACTAGAGAGCATGGTTTCACTCCAGCACCCAGTTGAGTCTTGTTTGTATCAATACAGATGTGCATGCTGGAGACAGCCCCTACTTTCTTATCAGCCTCAGCACCTGGGCACAGATCCAGACATCAGCGCTGTTGGGAACAGCAGGCCAAGCCAGGCACGCAGTGGGGCCTGTGCCTCACTCTAGGTGTCCTGTCGTGCG--GTGGAGGGTAGCCTCCAAGCAGACCACCATCCTGGATGCGACCACTGCAGGTCATTTCACACTGGGATCCCTGTGGTCTTGCATTTCCTCTCCCATCTTTGAGCACATGTTAAAAAGTTATCTGT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163843445 546 + 165299245 TGAGCACAGTGGAATGGCATGCCAAGGTGTGGGGGCCAGAGGAGGTCAGTATCCTCCTGCACAGGTTTAGGTGAAAGTTGCCCAACACACCAAAGGCCACTGCACAAGACAACTGTCTCTTTATGATCCCAGCAACATTATGACTGCAGCTGACCTGCACGGCCATGTGTTATATTATACATCAGGGCTGGCATGAGCCCTCTGCAGCTGTGTTTAGTCAGGACTAGAGAGCATGGTTTCACTCCAGCACCCAGTTGAGTCTTGTTTGTATCAATACAGATGTGCATGCTGGAGACAGCCCCTACTTTCTTATCAGCCCCAGCACCTGGGCACAGATCCAGACATCAGCATGGCTGGGAACAGCAGGCCAAGCCAGGCACGCAGTGGGGCCTGTGCCTCACTCTAGGTGTCCTGTCGTGCG--GTGGAGGGTAGCCTCCAAGCAGATCACCATCCTGGATGCGACCACTGCAGGTCATTTCACACTGGGGTCCCTGTGGTCTTGCATTTCCTCTCCCATCTTTGAGCACATGTTAAAAAGTTAtctgt i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96623213 546 + 98384682 TGAGCACAGTGGAATGGCATGCCAAGGTGTGCGGGCCAGAGGAGGTCAGTATCCACCTGCACAGGTTTAGGGGAAAGTTGCCCAACACACCAAAGGCCGCTGCACAAGACAACTGTCTCTTTATGGTCCCAGCAACATTATGACTGCAGCTGACCTGCACGGCCACGTGTTATGTTATACATCAGGGCTGGCATGAGCCTTCTGCAGCTGTGTTTAGTCAGGACTAGAGAGCATGGTTTCACTCCAGCACCCAGTTGAGTCTTATTTGTATCAATACAGATGTGCATCCTGGAGACAGCCCCTGCTTTCTTATCAGCCCCAGCACCTGGGCACAGATCCAGACATCGGCACGGCTGGGAACAGCAGGACAAGCCAGGCACGCAGTGGGGCCTGTGCCTCACTCTAGGTGTCTTGTCGTGCG--GTGGAGGGTAGCCTCCAAGCAGACCACCATCCTGGATGGGACCACTGCAGGTCATTTCACACTGGGGTCCTTGTGGTCTTGCATTTCCTCTCCCATCTTTGAGCACATGTTAAAAAGTTATCTGT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169830795 535 + 171630274 TGAGTGGAGTGGAAGGGCACGCCAAGGTGGGGAGGCC--GGGTGGTCAGGATCCACCTGCACAGGTTCCGGAGAAAGTGGTCCAACACACCAATGGCCGCTGCACAAGACAACTGTCTC--TAAGGTCCCAGCACCTTGATGGCTCCAGCTGACCTGCACGGCCATGTGTCACATG--ACATCAGCGCTGGCATGACCCCTCTGCATCCATGTGGAGTGAGGACAGGAGAGCATGGACCCACTCCCGCACCTGGTGGAGTCTTGTCTG--TCAGCACCAACGTGGACCCTGAAGATGGCCCCTGCTTTCCGATCTG--CCGACGTCTGGGCACAGATCCAGGCCTCAGCACTGCTGGGAACCGCAGACCGCGCTGGACACGGAGTAGGG-CTGTGCCG-GCTCTGGATGTCCCCGAGTGTGGTGTGGAGGGCAGCCCCCA-GCAGATGGCCATCCTTGGCACGGCCACTGCAGGTCATTTCTCACGGGGGTCTCTGTGGTCTTGCATTTCTTCTCCCATCTTTTAGCACATTTTAAAAAGTTCTTTGT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C a score=386841.000000 s hg38.chr6_KB021644v2_alt 26694 223 + 185823 Tggccgggcacagtggctcatgcctgtaatcccagaactttgggaggccaaggtgggtggatcatgaggtcaagcattcaaaaccagcctggccaacatagtgaaaccccgtctctact---aaaaaaacttacaaaaaa-ttagctgggcgtggtggtgggtgcctgtaatcccagctacttgagaggctgaggcaggagaatcacttgaacctgggaggtggagg s panTro4.chr6 170639930 223 + 172623881 Tggccaggcacagtggctcacgcctgtaatcccagaactttgggaggccaaggtgggtggatcatgaggtcaagcattcaaaaccagcctggccaacatagtgaaaccccgtctctact---aaaaaaacatacaaaaaa-ttagctgggcgtggtggtgggtgcctgtaatcccagctacttgagaggctgaggcaggagaatcacttgaacctgggaggtggagg i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172392053 222 + 174210431 Tggccgggcacagtggctcacgcctgtaatcccagaactttgggaggccgacgtgggtggatcatgaggtcaaacattcaaaaacagcctggccaacatagtgaaacctcatctctact----aaaaaacttacaaaaaa-ttagccgggcatggtggtgggtgcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggtggagg i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168071927 223 + 169853907 Tggccaggcacagtggctcacacctgtaatcccagcactttgggaggctgaagcgggtggatcacaaggtcaagcattcaagaccagcctggccaacatagcgaaatcccgtctctact---aaaaaaaaatacaaaaaa-ttagctaggcatggttgtgggcgcctataatcccagctactcgggaagctgaggcaggagaatcacttgaacctgggaggtggagg i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169027716 223 - 170955103 Tggccaggcacagtggctcacacctgtaatcccagcactttgggaggctgaagcaggtggatcacaaggtcaagcattcaagaccagcctggccaacatagcgaaatcccgtctctact---aaaaaaaaatacaaaaaa-ttagctaggcatggttgtgggcgcctataatcccagctactcgggaagctgaggcaggagaatcacttgaacctgggaggtggagg i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163843991 226 + 165299245 tggccgggcacagtggctcacacctgtaatcccagcactttgggaggctgaagcgggtggatcacgaggtcaagcattcaagaccagcctggccaacataacgaaatcccatctctactaaaaaaaaaaaatacaaaaaa-ttagctaggcgtgattgtgggcacctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaacctgggaagtggagg i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96623759 224 + 98384682 Tggccgggcacagtggctcacacctgtaatcccagcactttgggaggctgaagcggttggatcacgaggtcaagcattcaagaccagcctggccaacatagcaaaatcctgtctctact---aaaaaaaaagatacaaaatttagctaggcatggttgtgggcacctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaacctgggaggtggagg i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169831330 0 + 171630274 C e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C a score=26320.000000 s hg38.chr6_KB021644v2_alt 26917 58 + 185823 ttgcagcgagccgtgattgcgccactgcactccagcccagatgacagtgcgagactct s panTro4.chr6 170640153 58 + 172623881 ttgcagcgagctgtgattgtgccactgcactccagcccagatgacagtgcgagactct i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172392275 58 + 174210431 ttgcagtgagccgtgatcacgccactgcactccagcctagacgatagtgcgagactct i ponAbe2.chr6 C 0 C 0 s chlSab2.chr13 96623983 58 + 98384682 ttgcagtgagccaagatcatgccactgcactccagtctggacgataaagtgagactct i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169831330 0 + 171630274 C e canFam3.chr1 56136027 2466 + 122678785 I e papAnu2.chr4 163844217 0 + 165299245 C e nomLeu3.chr3 156251705 0 + 157873769 C e rheMac3.chr4 168072150 0 + 169853907 C e macFas5.chr4 169027939 0 - 170955103 C a score=1756.000000 s hg38.chr6_KB021644v2_alt 26975 19 + 185823 gtctcaaaaaaaaaaaaaa s chlSab2.chr13 96624041 19 + 98384682 gtctcaaaaaaaaaaaaaa i chlSab2.chr13 C 0 I 5 e calJac3.chr4 169831330 0 + 171630274 C e canFam3.chr1 56136027 2466 + 122678785 I e papAnu2.chr4 163844217 0 + 165299245 C e nomLeu3.chr3 156251705 0 + 157873769 C e rheMac3.chr4 168072150 0 + 169853907 C e ponAbe2.chr6 172392333 0 + 174210431 C e macFas5.chr4 169027939 0 - 170955103 C e panTro4.chr6 170640211 0 + 172623881 C a score=0.000000 s hg38.chr6_KB021644v2_alt 26994 189 + 185823 ccagcactttgggaggccgaggcgggcggatcacgaggtcaggagatcgagaccatcccggctaaaacggtgaaaccccgtctctactaaaaaatacaaaaaattagccgggcgtagtggcgggcgcctgtggtcccagctacttgggaggctgaggcaggagaatggcgtgaacccgggaggcggagc e calJac3.chr4 169831330 0 + 171630274 C e canFam3.chr1 56136027 2466 + 122678785 I e chlSab2.chr13 96624060 5 + 98384682 I e papAnu2.chr4 163844217 0 + 165299245 C e nomLeu3.chr3 156251705 0 + 157873769 C e rheMac3.chr4 168072150 0 + 169853907 C e ponAbe2.chr6 172392333 0 + 174210431 C e macFas5.chr4 169027939 0 - 170955103 C e panTro4.chr6 170640211 0 + 172623881 C a score=29718.000000 s hg38.chr6_KB021644v2_alt 27183 58 + 185823 ttgcagtgagccgagatcccgccactgcactccagcctgggcgacagagcgagactcc s rheMac3.chr4 168072150 58 + 169853907 ttgcagtgagccaagatcacgccactgcactccagtctggacgataaagcaagactct i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169027939 58 - 170955103 ttgcagtgagccaagatcacgccactgcactccagtctggacgataaagcaagactct i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163844217 58 + 165299245 ttgcagtgagccaagatcatgccactgcactccagtctggacgataaagcaagactct i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169831330 0 + 171630274 C e canFam3.chr1 56136027 2466 + 122678785 I e chlSab2.chr13 96624060 5 + 98384682 I e nomLeu3.chr3 156251705 0 + 157873769 C e ponAbe2.chr6 172392333 0 + 174210431 C e panTro4.chr6 170640211 0 + 172623881 C a score=16769.000000 s hg38.chr6_KB021644v2_alt 27241 43 + 185823 gtctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa s panTro4.chr6 170640211 26 + 172623881 gtctcaaaaaaaaaaaaagaaaaaaa----------------- i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172392333 43 + 174210431 gtctcaaaaaaaaaaaaaaaaagaaaagaaaagagaaaaaaag i ponAbe2.chr6 C 0 I 3 s rheMac3.chr4 168072208 22 + 169853907 gtctcaaaaaacaaaaagaaaa--------------------- i rheMac3.chr4 C 0 I 4 s macFas5.chr4 169027997 22 - 170955103 gtctcaaaaaacaaaaagaaaa--------------------- i macFas5.chr4 C 0 I 4 s papAnu2.chr4 163844275 21 + 165299245 gtctcaaaaaa-aagaaaaaaa--------------------- i papAnu2.chr4 C 0 I 4 e calJac3.chr4 169831330 0 + 171630274 C e canFam3.chr1 56136027 2466 + 122678785 I e chlSab2.chr13 96624060 5 + 98384682 I e nomLeu3.chr3 156251705 0 + 157873769 C a score=2955.000000 s hg38.chr6_KB021644v2_alt 27284 4 + 185823 GTTG s panTro4.chr6 170640237 4 + 172623881 GTTG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172392379 4 + 174210431 TTTG i ponAbe2.chr6 I 3 C 0 s rheMac3.chr4 168072234 4 + 169853907 TTCA i rheMac3.chr4 I 4 C 0 s macFas5.chr4 169028023 4 - 170955103 TTCA i macFas5.chr4 I 4 C 0 s papAnu2.chr4 163844300 4 + 165299245 ttta i papAnu2.chr4 I 4 C 0 s chlSab2.chr13 96624065 4 + 98384682 TTTA i chlSab2.chr13 I 5 C 0 e calJac3.chr4 169831330 0 + 171630274 C e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C a score=7042.000000 s hg38.chr6_KB021644v2_alt 27288 3 + 185823 TCT s panTro4.chr6 170640241 3 + 172623881 TCT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172392383 3 + 174210431 TCT i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168072238 3 + 169853907 TCT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169028027 3 - 170955103 TCT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163844304 3 + 165299245 tct i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96624069 3 + 98384682 TCT i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56138493 3 + 122678785 TCC i canFam3.chr1 I 2466 C 0 e calJac3.chr4 169831330 0 + 171630274 C e nomLeu3.chr3 156251705 0 + 157873769 C a score=232101.000000 s hg38.chr6_KB021644v2_alt 27291 100 + 185823 CTCTTGTATTTTCCACTATTGAATAGAGTGTGCTTAGGATGAAAATGA----CAGAGAATGCGATTTTCATTTCTTGATCCGTCAATATTTTACTATGTGTCTG s panTro4.chr6 170640244 100 + 172623881 CTCTTGTATTTTCCACTATTGAATAGAGTGTGCTTAGGATGAAAATGA----CAGATAATGCGATTTTTATTTCTTGATCCGTCAATATTTTACTATGTGTCTG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172392386 103 + 174210431 C-CTTGTATTTTCCACTATTGAATAGAGTGTGCTTGGGATGAAAATGACAGTCAGATAATGCGATTTTTATTTCTTGATCCGTCAACATTTTACTATGTGTCTG i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168072241 104 + 169853907 CTCTTGTATTTTCCACTATTGAATAGAGTGTGCTTAGAATGAAAATGACAGTCAGAGAATATGATTTTTATTTCTTGATCCATCAATATTTTACTATGTGTCTG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169028030 104 - 170955103 CTCTTGTATTTTCCACTATTGAATAGAGTGTGCTTAGAATGAAAATGACAGTCAGAGAATATGATTTTTATTTCTTGATCCATCAATATTTTACTATGTGTCTG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163844307 104 + 165299245 cttttgtatTTTCCACTACTGAATAGAGTGTACTTAGAATGAAAATGACAGTcagataatatgatttttatttcttgatccGTCAATATTTTACTATGTGTCTG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96624072 104 + 98384682 CTTTTGTATTTTCCACTATTGAATAGAGTGTGCTTGGAATGAAAATGACTGTCAGATAATACGATTTTTATTTCTTGATCCGTCAATATTTTACTATGTGTCTG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169831330 104 + 171630274 CTCTTGTATTTCCCAGTATTGAACAGAGTGTGCTTAGGATGAAAATGACAGTCAGATAATATGAGTTTTAATTCTCAATCTGTCAGTATTTTACTATGTGTCTG i calJac3.chr4 C 0 C 0 s canFam3.chr1 56138496 86 + 122678785 TTCTTGTGTTTCCCGGT-----------TGTGCTC-GGAGGACAGCAGCAGACAG--AAGGTGACTCCTGTCC----GTCTTCCAGCTCTGGGCTCTGGCTCTG i canFam3.chr1 C 0 C 0 e nomLeu3.chr3 156251705 0 + 157873769 C a score=241356.000000 s hg38.chr6_KB021644v2_alt 27391 128 + 185823 GGATGAAGCACTAATTACCTTAAAACTGTAATTAACTTGTCAAATGTCTTTCCTCCAAGAATCCTGCAAAGGTCTTAAAGGTCTTAAAGGGTGAGTAAGTAATAGTCTGTGATATAATTTAAAAGGAA s panTro4.chr6 170640344 128 + 172623881 GGATGAAGCACTAATTACCTTAAACCTGTAATTAACTTGTCAAATGTCTTTCCTCCAAGAATCCTGCAAAGGTCTTAAAGGTCTTAAAGGGTGAGTAAGTAATAGTCTGTGATATAATTTAAAAGGAA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172392489 128 + 174210431 GGATGACGCACTAATTACCTTAAACCTGTAAGTAACTTGTCAAATGTCTTTCCTCCAAGAATCCTGCAAAGGTCTTAAAGGTCTTAAAGGGTGAGTAAGTAATAGTCTGTGATATAATTTAAAAGGAA i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168072345 128 + 169853907 GGATGAAGCACTAATCACCTTAAACTGGTAACTAACTTGTCAAACATCTTTCCTCCAAGAATCCTGCAAAGGTCCTAAAGGTCTTAAAGAGTGAATAAGTAATAGTCTGTAAAATAATTTAAAAGGAA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169028134 128 - 170955103 GGATGAAGCACTAATCACCTTAAACTGGTAACTAACTTGTCAAACATCTTTCCTCCAAGAATCCTGCAAAGGTCCTAAAGGTCTTAAAGAGTGAATAAGTAATAGTCTGTAAAATAATTTAAAAGGAA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163844411 128 + 165299245 GGATGAAGCACTAATCACCTCAAACTGGTAACTAACTTGTCAAACGTCTTTCCTCCAAGAATCCTGCAAAGGTCCTAAAGGTCTTAAAGAGTGAATAAGTAATAgtctgtaatataatttaaaaggaa i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96624176 128 + 98384682 GGATGAAGCACTAATCACCTCAAACTGGTAACTAACTTGTCAAACGTCTTTCCTCCAAGAATCCTGCAAAGGTCCTTAAGGTCTTAAAGAGTGAATAAGTAATAGTCTGTAATATAATTTAAAAGGAA i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56138582 97 + 122678785 TGAAGTAGCCCTGGCTGCTTTGCATCTGCAGTGACCCCCTCAGATAACGTTCCTTCAAGAATCTCGCA---------GAGGTTTTATAGGGTGAATATGCAATGGT---------------------- i canFam3.chr1 C 0 C 0 e calJac3.chr4 169831434 0 + 171630274 C e nomLeu3.chr3 156251705 0 + 157873769 C a score=929662.000000 s hg38.chr6_KB021644v2_alt 27519 400 + 185823 GGCCACAAACCACTTTTTCTGTTTTTCTTTGATTTCATGGAATAGTCTTCATTCTTTTCTCCTGTCCTCCTATTTGGATACATGTGGCTGCC-GTGAGCCTCTAGAC---GCCCTCCCCCACTTCCAGCACTTGGCTGAC-GGATTTGCTGGTCTGTGACCCCTGCCAGAGGCCTGAAAATCTTCGCAGTTTATGCAAAGCCAAGAGAGGCTGCGTGCAAGGCAGCTGAGGGGAGCCCTCCAATACGC------------------CAGCATAGGATTTGGAGCTTTGGAAGGTCAGTGGGGCTAAGTCCTTTTCAAGCAAGACAAAGCTGAGGAAACACA-GGCTCAGGCCCAACGTCCACAAGTACACATTGCTCCAGAGAGGAGCTGGAGTTCTGGGACCGGCATTTAGTGGAGGACACCC s panTro4.chr6 170640472 400 + 172623881 GGCCACAAACCACTTTTTCTGTTTTTCTTTGATTTCATGGAATAGTCTTCATTCTTTTCTCCTGTCCTCCTATTTGGATACATGTGGCTGCC-GTGAGCCTCTAGAC---GCCCTCCCCCACTTCCAGCACTTGGCTGAC-GGATTTGCTGGTCTGTGACCCCTGCCAGAGGCCTGAAAATCTTTGCAGTTTATGCAAAGCCAAGAGAGGCTGTGTGCAAGGCAGCTGAGGGGGGCCCTCCAATACGC------------------CAGCATAGGATTTGGAGCTTTGGAAGGTCAGTGGGGCTAAGTCCTTTTCAAGCAAGACAAAGCTGAGGAAACACA-GGCTCAGGCCCAACGTCCACAAGTACACGTTGCTCCAGAGAGGAGCTGGAGTTCTGGGACCGGCATTTAGTGGAGGAGACCC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172392617 400 + 174210431 GGCCACAAACCACTTTTTCTGTTTTTCTTTGATTTCATGGAATAGTCTTCATTCTTTTCTCCTGTCCTCCTATTTGGATACATGAGGCTGCC-GTGGGCCTCCAGAT---GCCCTCCCCCACTTCCAGCACTTGGCTGAT-GGATTTGCTGGTCTGTGACCCTTGTCAGAGGCCTGGAAATCTTAGCAGTTTATGCAAAGCCAAGAGAGGCTGTGTGCAAGGCAGCTGAGGGGAGCCCTCCAGTATGC------------------GAGCATAGGATTTGGAGCTTTGGAAGGTCAGAGGGGCTAAGTCCTTTTCAAGCAAGACAAAGCTGAGGAAACACA-GGCTCAGGCCCAACGTCCACAAGTACACATAGCTCCAGGGAGGAGCTGGAGTTCTGGGACTGGCATTTAGTGGAGGACACCC i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168072473 399 + 169853907 GGCCACAAACCACTTTTTCTGTTTTTCTTTGATTTCATGGAAGAGTCTTCATTCTTTTCTCCTGTCCTCCTATTTGGATACATGTAGCTACC-ATGAGCCTCCAGAC---ACCCTCCCCCACTTCCGGCACTTGGTTGAC-AGATTTTCTGGTCTGTGACCCCTGTCAGAGGTCTGAAAATCTAAGCAGTTTATGCAAAGCTGAGAGAGGCTCTGTGCAAGGCAGCTGAGGAGAGCCCTCCAATACGC------------------CAGCATAGGATTTGGAGCTTTGGAAGGTCAGTGAGGCTAAGTCCTTTTCAAGCAAGAC-AGGCTGAGAAAATACA-GGCTCAGGCCCAACGTCCACAAGTCCATGTAGCTCCAGAGAGGAGCTGGAGTTCTGGGACTGGCATTTAGTGGAGGACACCC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169028262 399 - 170955103 GGCCACAAACCACTTTTTCTGTTTTTCTTTGATTTCATGGAAGAGTCTTCATTCTTTTCTCCTGTCCTCCTATTTGGATACATGTAGCTACC-ATGAGCCTCCAGAC---ACCCTCCCCCACTTCCGGCACTTGGTTGAC-AGATTTTCTGGTCTGTGACCCCTGTCAGAGGTCTGAAAATCTTAGCAGTTTATGCAAAGCTGAGAGAGGCTCTGTGCAAGGCAGCTGAGGAGAGCCCTCCAATACGC------------------CAGCATAGGATTTGGAGCTTTGGAAGGTCAGTGAGGCTAAGTCCTTTTCAAGCAAGAC-AGGCTGAGAAAATACA-GGCTCAGGCCCAACGTCCACAAGTCCATGTAGCTCCAGAGAGGAGCTGGAGTTCTGGGACTGGCATTTAGTGGAGGACACCC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163844539 397 + 165299245 GGCCACAAACcacttcttctgtttttctttgatttcatgGAAGagtcttcattcttttctcctg---TCCTATTTGGATACATGTAGCTACC-ATGAGCCTCCAGAC---ACCCTCCCCCACTTCCGGCACTTAGTTGAC-AGATTTTCTGGTCTGTGACCCCTGTCAGAGGTCTGAAAATCTTAGCAGTTTATGCAAAGCCAAGAGAGGTTTTGTGCAAGGCAGCTGAGGAGAGCCCTCCAATACGC------------------CAGCATAGGATTTGGAGCTTTGGAAGGTCAGTGAGGCTAAGTCCTTTTCAAGCAAGACAAGGCTGAGGAAATACA-GGCTCAGGCCCAACGTCCACAAGTACATGTAGCTCCAGAGAGGAGCCGGAGTTCTGGGACTGGCATTTAGTGGAGGACACCC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96624304 400 + 98384682 GGCCACAAACCACTTCTTCTGTTTTTCTTTGATTTCATGGAAGAGTCTTCATTCTTTTCTCCTGTCCTCCTATTTGGATACATGTAGCTACC-ATGAGCCTCTAGAC---ACCCTCCCCCACTTCCGGCACTTGGTTGAC-AGATTTGCTGGTCTGTGACCCCTGTCAGAGGTCTGAAAATCTTAGCAGTTTATGCAAAGCCAAGAGAGGCTCTGTGCAAGGCATCTGAGGAGAGCCCTCCAATACGC------------------CAGCGTAGAATTTGGAGCTTTGGAAGGTCAGTGAGGCTAAATCCTTTTCAAGCAAGACAAGGCTGAGGAAACACA-GGCTCAGGCCCAACGTCCACAAGTCCATGTAGCTCCAGAGAGGAGCTGGCGTTCTGGGACTGGCATTTAGTGGAGGACACCC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169831434 397 + 171630274 GGCCACAAAGCCCTTTTTCTGCTTTTCTCTGATTTCATGCGGTAGCCTTCATTCTTTCCTCCTGTCCTTTCATTTGCTTACATGGGGCTGCC-ATGAGCCGGCAGGC---ACCCTCCCCCACTCCCAGCACGTGGCTGACTCGGTTTGCTGGTCTGTGACCCCCGTCAGAGGTCTGGAAATCTGGGCGGCTTATGCAGAGCCAGGACAGGCTGTGTGCGAGTAAGCCCGGGAGAGGCCCCCAGGGCGC------------------CAGCACAGGATTTGGAATGGT-GAGGGTCAGAGGGGCTAAGCGCTTTTCAAGCAAGACAAGGCTGAGGAAACACA-GGCGCAGGCCCAATGTCCAGAAGTACACGTAGCTCC--GTTGGAGCTGGAGTTCTGGGACTTGTGTTTACTGGAGGACA-CC i calJac3.chr4 C 0 C 0 s canFam3.chr1 56138679 356 + 122678785 -------------TCCATCCGTTTCTCTG-------------------------TTTTCTCGTG---TCCTGTTTGGATACCTCGGGTGACCTGCGGGACTGCAGACTCTGCTCTCTTGC-CCTCCAGCACTTGGCCACC-GG----------CTGTAGTTCCTTCCAG-GGTCTGGAAATCTTGGCTGTTTCTGTGACCCCAGGATAAGCCACGTGTAAGGAAGCAGAAAACAG-TCTCCACATCGTGGATCTTGTTAGAGTCCGTAGTGGAGGCTTCAGGATTT------GACAAAAGACCTAAGTCCCTCT----TGGGACAAGGCAGAGGAAATGCAGGGCCCCGGCCCCACTTGC-TAAG--CACGCAGCTCCAGCAGGAAGGCTCAGAACCCGGATCTGCATTCAGTGCCGAATGCCC i canFam3.chr1 C 0 I 807 e nomLeu3.chr3 156251705 0 + 157873769 C a score=1038970.000000 s hg38.chr6_KB021644v2_alt 27919 471 + 185823 CAGAGCCCACGAGGAGGGAACTGGAGGGAGAATTCAGCCAGTGCTAGCCATAACATCACTCAG-CCACAGTGAGCCATGGCTGGGCCTGCCCCTGTGAGGCACAGACACCTTGC-Tttttttttgttttgctttgctttgttttttgagacggagtctcactctcttgcccaggctggagtgcaatggtgccatctcagctcactgcagcctctgctccccagattcaagcgattctcccacctcagcctctcaagtagctgggattacaggcacctgccacaatgcctgtctaatttttgtattgttagtagagatggggtttcaccatgttgaccaggctggtctcgaactcctgacctcag---------------gtgatctgcccaccttggcttcccaaagtgctgggattacaggcatgagccactgtgccctgccCACCCTTGTTTTAAGGTTGGAATTAATACATAGATGAAAGAACAG s panTro4.chr6 170640872 473 + 172623881 CAGAGCCCACGAGGAGGGAGCTGGATGGAGAATTCAGCCAGTGCTAGCCACAGCATCACTCAGCCCACAGTGAGCCATGGCTGGGCCTGCCCCTGTGAGGCACAGACACCTTGCttttttttttcttttgctttgctttgttttctgagacggagtctctctctcttgcccaggctggagtgcaatggtgccatctcagctcactgcagcctctgctccccagattcaagcgattctcccacctcagcctctcaagtagctgggattacaggcacctgccacaatgcctggctaatttttgtattgttagtagagatggggtttcaccatgttgaccaggctggtctcgaactcctgacctcag---------------gtgatctgcccaccttggcttcccaaagtgctgggattacaggcatgagccactgtgccctgccCACCCTTGTTTTAAGGGTGGAATTAATACACAGATGAAAGAACAG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172393017 473 + 174210431 CAGAGCCCACAAGGAGGGAGTTGGATGGAGAATTCAGCCCGTGCTAGCCACAGCATCACTCAGCCCACAGTGAGCCATGGCTGGGCCTGCCCCTGTGAGGCACAAACACCTTGCtttttgttttgttttgctttgctttgttttttgagacagagtctcattctattgcccaggctagagtgcaatggtgccatctcagcccactgcagcctctgcttcccagattcaagctattctcccacctcagcctctcaagtagctgggattacaggcacctgccacaatgcctggctaatttttgtattgttagtagagatggggtttcaccatgttgaccaggctggtctcgaactcctgacctcag---------------gtgatctgcctactttggcttcctaaagtgctgggattacaggcatgagccactgtgccctgccCACCCTTGTTTTAAGGGTGGAATTAATAGACAGATGAAAGAACAG i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168072872 469 + 169853907 CAGAGCCCACGAGGAGGGAGCTGGATGGAGAATTCAGCCAGTGCTAGCCACAGCATCACTCAGCCCACAGTGAGCCATGGCTGGGCCTGCCCC-GTGAGGCACAGACACCTTGCtttttgttttgttttgctttactttattttttgaaacagagtctcactctattgcccaggctggagtgcaacggctccatcccagctcactgcagcctctgcttcctggattcaagtggttctcccacctcagcctcccaagtagctgggattacaggcatctgccacaatgcctggctaatttttgtattgttagcagagatggggtttcaccatgttgactaggctggttttgaa---ctgacccgag---------------gtgagccgcccaccttggcatcccaaagtgctgggattacaggcatgagccactctgcccagccCACCCTTGTTTTAAGGGTGGAATTCATACACAGATGAGAGAACAG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169028661 469 - 170955103 CAGAGCCCACGAGGAGGGAGCTGGATGGAGAATTCAGCCAGTGCTAGCCACAGCATCACTCAGCCCACAGTGAGCCATGGCTGGGCCTGCCCC-GTGAGGCACAGACACCTTGCtttttgttttgttttgctttactttattttttgaaacagagtctcactctattgcccaggctggagtgcaacggctccatctcagctcactgcagcctctgcttcctggattcaagtggttctcccacctcagcctcccaagtagctgggattacaggcatctgccacaatgcctggctaatttttgtattgttagtagagatggggtttcaccatgttgactaggctggttttgaa---ctgacctcag---------------gtgagccgcccaccttggcctcccaaagtgctgggattacaggcatgagccactgtgcccagccCACCCTTGTTTTAAGGGTGGAATTCATACACAGATGAGAGAACAG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163844936 469 + 165299245 CAGAGCCCACGAGGAGGGAGCTGGAGGGAAAATTCAGCCAGTGCTAGCCACAGCATCACTCAGCCCACAGTGAACCATGGCTGGGCCTGCCCG-GTGAGGCACAGACaccttgctttttgttttgttctgctttgctttgttttttgaaacagagtctcactctattgcccaggctggagtgcaacggctccatctcagctcactgcagcctctgcttcctggattcaagtggttctcccacctcagcctcccaagtagctgggattacaggcatctgccacaatgcctggctaatttttgtattgttagtagagatggggtttcaccatgctgaccaggctggttttgaa---ctgacctcag---------------gtgaaccgcccaccttggtctcccaaagtgctgggattacaggcatgagtcgctgtgcccagcccacccTTGTTTTAAGGGTGGAATTAATACACAGATGAGAGAACAG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96624704 483 + 98384682 CAGAGCCCATGAGGAGGGAGCTGGATGGAAAATTCAGCCAGTGCTAGCCACAGCATCGCTCAGCCCACAGTGAACCATGGCTGGGCCTGCCC--GTGAGGCACAGACACCTTGCtttttgttttgttttgttttgctttgttttttgaaacagagtctcactctattgcccaggctggagtgcaaccgctccacctcagctcactgcagcctctgcttcccggattcaagtggttctcccacctcagcctcccaagtagctgggattacaggcatctgccacaatgcctggctaatttttgtattgttagtagagatggggtttcaccatgttgaccaggctggttttgaa---ctgactcaggtgaaccgcccaccttgtgaaccgcccaccttggcctcccaaagtgctgggattacaggcatgagccactgtgcccagccCACCCTTGTTTTAAGGGCGGAATTAATACACAGATGAGAGAACAG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169831831 437 + 171630274 CAGAGCCCACGAGGAGGGAGCTGGACGGAGAATTCAGCCAGTG----------CATCGCTCAGCCCACAGTGAGCCGCGGCTGGGCCTGCCCCTGCCAGGCGCAGACACCttgtttttcattttgttttg------------tttcaagttggattctcactctgttgcccgggctggagtgcaatggtgccatctcggctcactgtgacctctgcttcccaggttcaagtgcttttcccacctcagcctcccaagtagctgggattacaagcacctgccccagtgcctggctaatttctgtattgttagtagagatggggtttccccacgttgaccaggctggtcttgaacttctgacctcac---------------atgatctgccagccttggcctcccaaagcgctgggatcacaggcacgagccaccatgcccggcTCACCCTCT--------------TTAACACATAGAGGAAGGAAGAG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56139035 807 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C a score=1377198.000000 s hg38.chr6_KB021644v2_alt 28390 490 + 185823 TGG-------------AAACCGGTGTAATAAAACTCTTCGGCCACACACTCA-TTTCATCCCCTCCATCTTCCTACAACTGCCTTGATTTTGTTGATG-----------------------TCGATCTCAGAGGAATCTGGCCCCACTGACTGTTTTAATAATGATTCCATTCCCCTTCCTGGTGACTGTCAGTGAGTGGGTGTTGgaaagtgactgtatttggacagggcctttgaagaggtgatcaagttacaacaaggccacgagggtgcctaatccagtctaacgatgtccttctacgaagaggagatttggacacacagagatactggggatttgtgtgcctagagggacgaccgcgcgaggacatagccagcagccgc-gtctcaagacaaagaggcggcccctgagaaaccaccctgcctgtacctcgaccttcgccttccaaccccgagaaagacaaggacatagatgtctgtggttactacccgggct-ctggtgttagggcagcTGAACCGGCTGAGAC s panTro4.chr6 170641345 490 + 172623881 TGG-------------AAACCGGTGTAATAAAACTCTTTGGCCACACACTCA-TTTCATCCCCTCCGTCTTCCTACAACTGCCTTGATTTTGTTGATG-----------------------TCGATCTCAGAGGAATCTGGCCCCACTGACTGTTTTAATAATGATTCCATTCCCCTTCCTGGTGACTGTCAGTGAGTGGGTGTTGgaaagtgactgtatttggacagggcctttgaagaggtgatgaagttaaaacgaggccacgagggtgcctaatccagtccaacgatgtccttctacgaagaggagatttggacacacagagatactggggatttgtgtgcctagagggacgaccgcgcgaggacatagccagcagccgc-gtctcaagacaaagaggcggcccctgagaaaccaccctgcctgtacctcgaccttcgccttccaaccccgagaaagacaaggacatagatgtctgtggttactatccgggct-ctggtgttagggcagcTGAGCCGGCTGAGAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172393490 504 + 174210431 TGGAAACCGGTATAATAAACCGGTATAATAAACCTCTTTGGCCACACACTCATTTTCATCCCCTCCTTCTTCCTACAACTGCCTTGATTTTGTTGATG-----------------------TTGATCTCAGAGGAATCTGGACCCACTGATTGTTATAATAACGATTCCATTCCCCTTCCTGGTGACTGTCAGTTAGTGGGTGTTGgaaagtgactgtatttggacagggcctttgaaaaggtgatgaagttaaaacgaggccactagggtgcctaatccagtctaatgatgtccttctaggaagaggagatttggacacacagagatactggggatttgtgtgcctagagggacgacggtgcgaggatacagccagtagccgc-gtctcaagacaaagaggcggcccctgagaaaccaccctgtctgtacctcgaccttcgccttccaaccccgagaaagacaaggacatagatgtctgtggttactacccgggct-ctgatgttagggcagcTGAGTCAGCTGAGAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156251705 488 + 157873769 TGG-------------AAACCGGTGTAATAAACCTCTTTGGCCATACACTCATTTTCATCCCCTCCGTCTTCCTACAACTGCCTTGATTTTGTTGATG-----------------------TCAATCTCAGAGGAATCTGGCCCCACTGACTGTTTTAAT---GATTCCATTCCCCTTCCTGGTGACTCTCAGTGAGTGGGTGTTGgaaagtgactgtatttggacagggcctttgaagaggtgatgaagttaaaacgaggccacgagggtgcctaatccagtctaacgatgtccttctaggaagaggagatttggacacacagagataccggggggttgtgtgcctagagggaccaccgcgcgagaacacagctagcagccgc-atctcaagacaaagaggcggcccctgagaaaccaccctgcctgtacctcgaccttcgccctccaaccctgagaaagacaaggacatagatgtctgtggctactactcgggct-ctggtgttagggcagcTGAGCGGGCTGAGAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168073341 492 + 169853907 TGG-------------AAACCAGTGTAATAAACCTCTTTGGCCACACGTTCATTTTCATTCCCTCCTTTTTCCTACAACTGTCTTGATTTTGTTGATG-----------------------TTGATCTCAGAGGAATTTGGCCTCACTGATTGTTTTAATAATGATTCCATTCCCCTTCCTGGTGACTGTCAGTGAGTGGGTGTTGgaaagtgactgtatttggacagggcctttgaagaggtgatgaagttaaaacaaggccacgagggtgcctaatccagtctaacgatgtccttctaaaaagaggacgtttggacgcacagagatactggggatttatatgcacagagggatgactgtgcaaggacacagccagcagccgt-gtctcaagacaaagaggcggtccctgagaaaccaccccgcctgcacctcgaccttggccctccatccccgagaaagacaaggacatagacgtctgtggttaccacccaggctgttggtgttagggcagcTGAGCCGGCTGAGAC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169029130 492 - 170955103 TGG-------------AAACCAGTGTAATAAACCTCTTTGGCCACACGTTCATTTTCATTCCCTCCTTTTTCCTACAACTGTCTTGATTTTGTTGATG-----------------------TTGATCTCAGAGGAATTTGGCCCCACTGATTGTTTTAATAATGATTCCATTCCCCTTCCTGGTGACTGTCAGTGAGTGGGTGTTGGGAAgtgactgtatttggacagggcctttgaagaggtgatgaagttaaaacaaggccacgagggtgcctaatccagtctaacgatgtccttctaaaaagaggacatttggacgcacagagatactggggatttatgtgcacagagggatgactgtgcaaggacacagccagcagccgt-gtctcaagacaaagaggtggtccctgagaaaccaccccgcctgcacctcgaccttggccctccatccccgagaaagacaaggacatagacgtctgtggttaccacccaggctgttggtgttagggcagcTGAGCCGGCTGAGAC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163845405 492 + 165299245 TGG-------------AAACCAGTGTAATAAACCTCTTTGGCCACACATTCATTTTCATTCCCTCCTTTTTCCTACAACTGTCTTGATTTTGTTTATG-----------------------TTGATCTCAGAGGAATCTGGCCCCACTGATTGTTTTAATAATGATTCCATTCCCCTTCCTGGTGACTGTCAGTGAGTGGGTGTTGGaaagtgactgtatttggacAGGGCCTTTGAAGAGGTGATAAAGTTAAAACAAGGCCACGAGGGTGCCTAATCCAGTCTAACGATGTCCTTCTAAAAAGAGGAGATTTGGACCCACAGAGATACCAGGGATTTATGTGAACAGAGGGATGACTGCGCAAAGACACAGCCAGCAGCCAT-GTCTCAAGACAAAGAGGCGGTCCCTGAGAAACCACCCTGCCTGCACCTCAACCTTGGCCCTCCATCCCCGAGAAAGACAAGGACATAGACGTCTGTGGTTACCACCCAGGCTGTTGGTGTTAGGGCAGCTGAGCCGGCTGAGAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96625187 492 + 98384682 TGG-------------AAACCAGTGTATTAAACCTCTTTGGCCACACATTCATTTTCATTCCCTACTTTTTCCTACAACTGTCTTGATTTTGTTGATG-----------------------TTGATGTCAGAGGAATCTGGCCCCACCCATTGTTTTAATAATGATTCCATTCCCCTTCCTGGTGACTGTCAGTGAGTGGGTGTTGgaaagtgactgtatttggacagggcctttgaagaggtgatgaagttaaaacaaggccacgagggtgcctaatccagtctaacgatgtccttctaaaaagaggagatttggacgcacagagattctggggatttatgtgcacagagggatgactgtgcaaggacacagccagcagccat-gtctcaagacaaagaggcggtccctgagaaaccaccctgcctgcacctcaaccttagacctccatccctgagaaagacaaggacatagacgtctgtggttaccacccgggctgttggtgtcagggcagcTGAGCCGGCTGAGAC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169832268 498 + 171630274 TGG-------------AAAGCAGTGTAATAAACC---------------TCATTTTCATCTCCCCCTTCTTCCTACAACCA-ATTGGTTTTATTGATGCATCTACTCCTCCCCCAGTTCCATTGGTGTCAGAGGAATCTGGCCCCACTGAGTGTTTGAATAATGATTCCATTCCTCTTCCTGGTGGCTGTCAGTGAGTGGGTGTTGgaaagtgtctctatttggacagggtctttgaagaagtggt-aagttaaactgaggccgcgagggtgcctcatccaggctgaggatgtccttccaagaagaggagatttggacacgcagagacaccagggatttgtgtgcacggagggatgaccacgggaggacacggagagcatctgctgtctccagccaaagacggggcccctgagaaaccacccagccggccccttgaccttggacctccagtccccagaaagacaaggacacagacggctgtggttaccacctggggg-gtggtgttagggcagccAAGACAGCTGAGGC i calJac3.chr4 C 0 I 226 e canFam3.chr1 56139035 807 + 122678785 I a score=2548.000000 s hg38.chr6_KB021644v2_alt 28880 1 + 185823 T s panTro4.chr6 170641835 1 + 172623881 T i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172393994 1 + 174210431 T i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156252193 1 + 157873769 T i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168073833 1 + 169853907 T i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169029622 1 - 170955103 T i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163845897 1 + 165299245 T i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96625679 1 + 98384682 T i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169832766 226 + 171630274 I e canFam3.chr1 56139035 807 + 122678785 I a score=2119368.000000 s hg38.chr6_KB021644v2_alt 28881 802 + 185823 AGGGGCCCTGGACCTGGGACCCTGTCCCCATCCTCCCTCCCTTGTGGTGACATCTTCTGCATATGCAAAGCGCAGGACCTGGAATGAAGCTGCCGTTTGGGCCACAGGAGATAAGGAATTTCCTTTTGATTTCAGCGTGTTTGGGCCAATTTCTTTCTCCTCCTGCCACCTGAAGCTGAAGCGTCCTGTTAGTATCATCACTAACAGGATatgcctgtaatctcagcactttaggaggccaaggtgggcagatcacatgaggtcaggagtttgagaccagcctgg-----tcaacatagcgaaaccccatctctacaaacaatataaaaattagccgggcgtggtggcaggtgcctgtaatcccagctactcgagaggctgaggtgggagaatcggttgaacct-ggaggcagagattgcagtgagccgagatggcaccattgcactccagcttgggcaacagagggcgactctgtctcaaaaaacaaagcaaaacgaaagaaaCAGGACGTCCTGTTTCTGTGTTTAGTATAGTATCTGTGTTAGTATCCACTCTTGCTGTGCCCCCGCTGGCCGGCCTGTCCTGGTCAAACCCTGGCCCTGGGCCTGATGCTCCTCTAAGAATCGCCGCTCTCCCCAGT--CAGAGTCCTCATGGCAGCCCCAC------GGTCAGCAGAGCCACGGGCCACCCTCACCCCGAGTCCCGCTGGAAGCCACTCGCCAAGCAGCCTCTCAGGTACCGCCCTCTGT-----GATAAACAGGGCACCATGTCCAGGCCAGGAGCCTCCACGAGAGAAAGGTCAGGGGGACGGA s panTro4.chr6 170641836 797 + 172623881 GGGGGCCCTGGACCTGGGACCCTGTCCCCATCCTCCCTCCCTCGTGGTGACATCTTCTGCATATGCAAAGAGCAGGACCTGGAATGAAGCTGCCGTTTGGGCCACAGGAGATAAGGAATTTCCTTTTGATTTCAGCGTGTTTGGGCCAATGTCTTTCTCCCCCTGCCACCTGAAGCTGAAGAGTCCTGTTAGTATCATCACTAACTGGATatgcctgtaatctcagcactttaggaggccaaggtgggcagatcacatgaggtcaggagtttgagaccagcctgg-----tcaacatagtgaaaccccatctctactaacaatataaaaattagccgggcatggtggcaggtgcctgtaatcccagctactcgagaggctgaggtgggagaatcggttgaacct-ggaggcagagattgcagtgagccgagatggcaccattgcactccagcttgggcaacagagggcgactctgcctcaaaaaacaaagcgaaacgaaagaaaCAGGACGTCCTGTTTCTGTGTT-----TAGTATCCGTGTTAGTATCCACTCTTGCTGTGCCCCCACTGGCCGGCCTGTCCTGGTCAAGCCCTGGCCCTGGGCCTGATGCTCCTCTAAGAATCGCCGCTCTCCCCAGT--CAGAGTCCTCATGGCAGCCCCAC------GGTCAGCAGAGCCACGGGCCACCCTCACCCCGAGTCCCGCTGGAAGCCACTCGCCAAGCAGCCTCTCCGGTACCGCCCTCTGT-----GATAAACAGGGCACCATGTCCAGGCCAGGAGCCTCCACGAGAGAAAGGTCAGGGGGACGGA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172393995 775 + 174210431 GGGGGCCCTGGACCTGGGACCCTGTCCCCATCCCCCCTCCCTCGTAGTGCCATCTTCTGCCCATGCAAAGAGCCGGACCTAGAATGAAGCTGCCGTTTGGGCCACATGAGATAAGGAATTTCCTTTTGATTTTAGAGTGTTTGGGCCAATTTCTTTCTCCGCCTGCCACCTGAAGCTGAAGCGTCCTGTTAGT---ATCACTAACAGGATATAcctgtaatcccagcactttaggaggccaaggtgggcagatcacgtgacgtcaggag-ttgagaccagcctgg-----tcaacacagtgaaaccccatctctactaacaatataaaaattagccgggcgtggtggcaggtgcctgtaatcccagctactcgggaggctgaggtgggagaatcggttgaacct-ggaggcagagattgcagtgagccgagatggcaccattgcactccagcttgggcaacagagggaga--ctgtctcaaaaaacaaagcaaaacgaaagaaaCAGGACGTCCTGT--------------TAGTATCTGTGTTAGTATCTGCTCTTGCTGCACCCCCACTGGCCGGCCTGTCCTGGTCAAGCCCTGGTGCTGGGCCTGATGCTCCTCTAAGAA---------TCCCCAGTCACAGAGTCCTCACGGCAGCCCCAC------GGTCAGCAGAGCCACAGGCCACCCTCACCCCGAGTCCCGCTGGAAGCCACTCGCCAAGCAGCCTCTCCGGTACCGCCCTCTGT-----GATAAACAGGGCACCATGTCCAGGCCAGGATCCTCCACGAGAGAAAGGTCAGGGGGACAGA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156252194 793 + 157873769 GGGGGCCCTGGACCTGGGACACTGTCCCCATCCCCCCTCCCTCGTGGTGCCATCTTCTGCCCATGCAAAGAGCCGGACCTAGAATGAAGCTGCCGTTTGGGCCACATGAGATAAGGAATTTCCTTTTGATTTCAGCGTGTTTGGGCCAATTTATTTCTCCCCCTGCCACCTGAAGCTGAAGCGTCCTGTTAGT---ATCACTAACAGGATatgcctgtaatcccagcactttaggaggccaagttgggcagatcacgtgaggtcaggagtttgagaccagcctgg-----tcaacatagtgaaaccccatctctactaacaatataaaaattagccgggcgtggtggcagctgcctgtaatcccagctactcgggaggctgaggtgggagaatcggttgaacct-ggaggcagaggttgcagtgagccgtgacggcaccattgcactccagcttgggcaacagagggagactctgtctcaaaaaacaaagcaaaacaaaagaaaCAGGACGTGCTGT--------------TAGTATCTGTGTTAGTATCCGCTCTTGCTGCGCCCCCACTGGCCGGCCTGTCCTGGTCAAGCCCTGGCCCTGGGCCTGATGCTCCTCTAAGAATCGCCGCTCTCCCCAGTCACAGAGTCCTCATGGCAGCCCCACGGTCAGGGTCAGCAGAGCCACGGGCCACCCTCGCCCCGAGTCCCGCTGGAAGCCACTCGCCAAGCAGCCTCTCCGGTACCGCCCTCTGT-----GATAAACAGGGCACCATGTCCAGACCAGGAGCCTCCACGAGGGAAAGGTCAGGGGGACGAA i nomLeu3.chr3 C 0 I 511 s rheMac3.chr4 168073834 787 + 169853907 GGGGGCCCTGCACCTGGGACCCTGTTCCTGTCCCCCCTCCCTCGTGGTGCCATCTTCTGCCCATTCAAAGAGCCGGAACTAGAATGAAGCTGCCGTTTGGGCCACATGAAATAAGGAATTTCCTTTTTATTTCAGCTTGTTTGGGCCAATTTCTTTCTCCCCCTGCTACCTGAAGCTGAAGCATCGTGTTAGT---ATCATTGACAGGATacgcctgtaatcccagcactttaggaggccaaggtgggcagatcacgtgaggtcaggagttcgagaccagcctgg-----tcaacatagtgaaaccccatctctactaacaatgcaaaaattggctgggcatgatggcagatgcctgaaattccagccactcagaaggctgaggtggaagaagcagttgaacct-ggagacagagcttgcagtgagcccagaccgcaccattgccccccagcttgagtaacagagggagactctgtctcaaaaaacaaagcaaaacaaaagaaaCAGGACGTTCTCT--------------TAGTATCTCTGTTAGTATCCACTCTTGCTGCTCCCCCACTGGCCGGCCTGTCCTGGTCAAGCCCTGGCCCTGGGCCTGATGCTCCTCTAAGAACCGCAGCTCTCCCCAGTCATAGAGTCCTCATGGCAGCCCCGT------GGTCAGCAGAGCCATGGGCCACCCTCACCCCGAGTCCTGCTGGAAGCCACTCGCCAAGCAGCCTCTCTGGTGCCGCCCTCTGT-----GATAGACAGGACACTATTCCCGGGCCAGGAGCCTCCACGAGGGAACGGTCAGGGGGATGGA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169029623 787 - 170955103 GGGGGCCCTGCACCTGGGACCCTGTTCCTGTCCCCCCTCCCTCGTGGTGCCATCTTCTGCCCATTCAAAGAGCCGGAACTAGAATGAAGCTGCCATTTGGGCCACATGAAATAAGGAATTTCCTTTTTATTTCAGCTTGTTTGGGCCAATTTCTTTCTCCCCCTGCTACCTGAAGCTGAAGCATCGTGTTAGT---ATCATTGACAGGATacgcctgtaatcccagcactttaggaggccaaggtgggcagatcacgtgaggtcaggagttcgagaccagcctgg-----tcaacatagtgaaaccccatctctactaacaatgcaaaaattagctgggcatgatggcagatgcctgtaattccagccactcagaaggctgaggtggaagaatcagttgaacct-ggaggcagaggttgcagtgagcccagaccgcaccattgcaccccagcttgagtaacagagggagactctgtctcaaaaaacaaagcaaaacaaaagaaaCAGGACGTTCTCT--------------TAGTATCTCTGTCAGTATCCACTCTTGCTGCTCCCCCActggccggcctgtcctggtcaagccctggccctgggcctgATGCTCCTCTAAGAACCGCAGCTCTCCCCAGTCATAGAGTCCTCATGGCAGCCCCGT------GGTCAGCAGAGCCATGGGCCACCCTCACCCCGAGTCCTGCTGGAAGCCACTCGCCAAGCAGCCTCTCTGGTGCCGCCCTCTGT-----GATAGACAGGACACTATTCCCGGGCCAGGAGCCTCCACGAGGGAACGGTCAGGGGGATGGA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163845898 787 + 165299245 GGGGGCCCTGCACCTGGGACCCTGTTCCTGTCCCCCCTCCCTCGTGGTGCCATCTTCTGCCCATGCAAAGAGCcggaactagaaagaagctgccGTTTGGGCCACATGAAATAaggaatttcctttttatttcagctTGTTTGGGCCAATTTGTTTCTCTCCCTGCTACCTGAAGCTGAAGCATCGTGTTAGT---ATCATTGACAggatacgcctgtaatcccagcactttaggaggccaaggtgggcagatcacgtgaggtcaggagtttgagaccagcctgg-----tcaacatagtgaaatcccatctctactaacaatacaaaaattaactgggcgtggtggcagttgcctgtaatcccagccactcggaaggctgaggtggaataatcggttgaacct-ggaggcagcccttgcagtgagccgagatggcaccattgcaccccagcttgAGTaaaagagggagactctgtctcaaaaaacaaagcaaaacaagagaAACAGGACGTTCTCT--------------TAGTATCTCTGTTAGTATCCACTCTTGCTGCTCCCCCACTGGCCGGCCTGTCCTGGTCAAGCCCTGGCCCTGGGCCTGATGCTCCTCTAAGAACCGCAGCTCTCCCCAGTCATAGAGTCCTCATGGCAGCCCTGT------GGTCAGCAGAGCCATGGGCCACCCTTACCCCGAGTCCTGCTGGAAGCCACTCGCCAAGCAGCCTCTCTGGTACCGCCCTCTGT-----GATAGACAGGACACTATTCCCGGGCCAGGAGCCTCCACGAGGGAATGGTCAGGGGGATGGA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96625680 787 + 98384682 GGGGGCCCTGCACCTGGGACCCTGTTCCCATCCCCCCTCCCTGGTGGTGCCATCTTCAGCCCATGCAAAGAGCCGGAACTAGAATGAAGCTGCCGTTTGGGCCACATGAAATAAGGAATTTCCTTTTTATTTCAGCTTGTTTGGGCCAATTTCTTTCTCTCCCTGCTACCTGAAGCTGAAGCATCGTGTTAGT---ATCATTGACAGGATGcacctgtaatcccagcactttaggaggccaaggtgggcagatcacgtgaggtcaggagttcgagaccagcctgg-----tcaacatagtgaaaccccatctctactaacaatacaaaaattagctgggcctggtggcagacgcctgtaagcccagccactcagaaggctgaggtggaagaatcggttgaaact-ggaggcagaggttgcagtgagccgagatggcaccattgcaccccagcttgagtaacagagggagactctgtctcagaaaacaaagcaaaacaaaagaaaTAGGACGTTCTCT--------------TAGTATCTCTGTTAGTATCCACTCTTGCTGCTCCCCCACTGGCCGGCCTGTCCTGGTCAAGCCCTGGCCCTGGGCCTGATGCTCCTCTAAGAACCGCAGCTCTCCCCAGTCACAGAGTCCTCATGGCAGCCCCGT------GGTCAGCAGAGCCATGGGCCACCCTCACCCCGAGTCCCGCTGGAAGCCATTCGCCAAGCAGCCACTCTGGTACCGCCCTCTGT-----GATAGATAGGACAGCATGTCCAGGCCAGGAGCCTCCACGAGGGAATGGTCAGGGGGATGGA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169832992 703 + 171630274 AGGGGCCCTGGACCTGGGACTCTGTCCCCATGCCCCTTCCCCTGTGGTGCTGTCTTCTGCCCA-GCAGAGAGCCAGAGTGTGACTGCACCTGCTGTTTTGGCCACGTGAGATAAGCAATTTTCTTCGGCTTTCAGCTTGTTGGGGCCAGTTTCTTTCTCC-CCTGCTACCTGAAGCTGAAGCA---TGATAGT---------AACAGGATGTgcctctaatcccagcactttgggaggccaaggcgggcagatcaggtga-gtcaggagttcaagaccagcctggtggtctcaacatggtgaaaccccatctctaca------------------tgagtgtggtggcgggtgcctgtaatcccagcaacttgggagtccgaggtgggagactggcttgaacctgggaagcggaggtcgcagag---------gacgccactgccctcca-cctgggcaacaga--------cagtctcaaaaaaC-------------------AGGATGTCCGGC--------------CGGTGTCACTGTTGGCGTCCGCTGTTGCTGCAGCTCAAT---------------------------GCCCTGGGCCTGGCACCACCCTCAGAACCGCCGCTCTTCCTGGTCACGGGATCCTCGTGGCAGCCCCAT------GGTCAGCAGGGCCGCTGGTCACCCTCACCCCGAGTCCCGC-GGAAGCCACTCGCGGAGCAGCCTCTCCGGTACCACCCTTTGCTGATGGATGAACAGGGCACCGTGTGCAGGCCAGGGGCCTCCACCAGAGAAAGGTCAGAGGGTTGGA i calJac3.chr4 I 226 C 0 e canFam3.chr1 56139035 807 + 122678785 I a score=14027.000000 s hg38.chr6_KB021644v2_alt 29683 11 + 185823 GCGTGGGGGGG s panTro4.chr6 170642633 11 + 172623881 GCGTGGGGGGG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172394770 11 + 174210431 GCGTGGGTGGG i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168074621 11 + 169853907 GCACGGGGGGT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169030410 11 - 170955103 GCACGGGGGGT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163846685 11 + 165299245 GCACTGGGGGT i papAnu2.chr4 C 0 I 558 s chlSab2.chr13 96626467 11 + 98384682 GCACGGGAGGT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169833695 10 + 171630274 GCTCGGGGTG- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56139035 807 + 122678785 I e nomLeu3.chr3 156252987 511 + 157873769 I a score=34389.000000 s hg38.chr6_KB021644v2_alt 29694 22 + 185823 ACCGCGTGCACGAGGCGGGGAC s panTro4.chr6 170642644 21 + 172623881 -CCGCGTGCACAAGGCGGGCAC i panTro4.chr6 C 0 I 357 s ponAbe2.chr6 172394781 22 + 174210431 GGCGCGTGCACGAGGCAGGGGC i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168074632 22 + 169853907 GCCGCGAGCAGGAGGCGGGGAT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169030421 22 - 170955103 GCCGCGAGCAGGAGGCGGGGAT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163847254 22 + 165299245 accgcgtgcacgaggcggggac i papAnu2.chr4 I 558 C 0 s chlSab2.chr13 96626478 22 + 98384682 GCCGCGAGCACGAGGCGGGGAC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169833705 20 + 171630274 ACCACGTg--gtggggggggat i calJac3.chr4 C 0 C 0 e canFam3.chr1 56139035 807 + 122678785 I e nomLeu3.chr3 156252987 511 + 157873769 I a score=6948.000000 s hg38.chr6_KB021644v2_alt 29716 4 + 185823 AGAG s panTro4.chr6 170643022 4 + 172623881 AGAG i panTro4.chr6 I 357 C 0 s ponAbe2.chr6 172394803 3 + 174210431 -GGA i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168074654 4 + 169853907 GGAG i rheMac3.chr4 C 0 I 28 s macFas5.chr4 169030443 4 - 170955103 GGAG i macFas5.chr4 C 0 I 34 s papAnu2.chr4 163847276 4 + 165299245 ggag i papAnu2.chr4 C 0 I 6 s chlSab2.chr13 96626500 4 + 98384682 GGAG i chlSab2.chr13 C 0 I 229 s calJac3.chr4 169833725 4 + 171630274 ggag i calJac3.chr4 C 0 C 0 e canFam3.chr1 56139035 807 + 122678785 I e nomLeu3.chr3 156252987 511 + 157873769 I a score=66530.000000 s hg38.chr6_KB021644v2_alt 29720 98 + 185823 GGTCGGG------GGGAC-GCGTGCACGAGGCAGGGATGGAGCCTGGGGCGGGGGGAC-GCGTGCAC---GAGGCGGGGATGGAGCCTGGGGCGGGGGGAC-GCGTGCAC s panTro4.chr6 170643026 91 + 172623881 GGTCGGG------GGGACCGCGAGCACGAGGcaggggcggagc-----gcggggggaccgcgtgcac---gaggcaggggcggagc-----gcggggggaccgcgtgcac i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172394806 57 + 174210431 GCGCGGG------GGGACCACGTGCACGAGGCAGGGACAGAGA----------------G-------------------------------TCGGGGGGACCATGTGCAC i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168074686 97 + 169853907 GACTGAGTGTGGGGGGACCGAGTGCATGAGGCGGGGACAGAGC-----GCAGGGGGCTTGTGTGCAC---GAGGCGGAGACGGAGC-----GTGGGGAGACCATGTGCAT i rheMac3.chr4 I 28 C 0 s macFas5.chr4 169030481 91 - 170955103 GTGTGGG------GGGACCGAGTGCATGAGGCGGGGACAGAGC-----GCAGGGGGCTTGTGTGCAC---GAGGCGGAGACGGAGC-----GTGGGGAGACCACGTGCAT i macFas5.chr4 I 34 C 0 s papAnu2.chr4 163847286 84 + 165299245 -------------gggaccgcgtgcacgaggcggggacggagc-----gtggggggaccgcgtgcac---gaggcggggacggagc-----gtggggggaccgcgtgcac i papAnu2.chr4 I 6 C 0 s calJac3.chr4 169833729 85 + 171630274 -------------gggctggtgaccgcgtggcgaggg-ggggt-----gtggggtgaccgtgtgcacagaggggatggagtggggt-----gtggggtgacc-cgtgcgc i calJac3.chr4 C 0 C 0 e canFam3.chr1 56139035 807 + 122678785 I e chlSab2.chr13 96626504 229 + 98384682 I e nomLeu3.chr3 156252987 511 + 157873769 I a score=159296.000000 s hg38.chr6_KB021644v2_alt 29818 127 + 185823 GAGGCGGGGACGGAG-----------------------------------CGT-GGGGGGACCGCGAGCACGAGGCGGGGACGCAGCG-CGGGG--GGACCGC-GTGCATGAGGC-GGGGACAGAG----GGTCGGGGGGAC-GCGTGCACGAGGCGGGGATGGAGCCTGGGG s panTro4.chr6 170643117 134 + 172623881 gaggcggggacagag-----------------------------------ggtcggggggaccgcgtgcacgaggcggggacagagggtcgggg--ggaccgc-gagcacgaggc-ggggatggagcctggggcggggggaccgcgtgcacgaggcggggatggagcctgggg i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172394863 130 + 174210431 gaggcggggacagag-----------------------------------ggtcggggggaccacgtgcacgaggcagggacagagggtcgggg--ggaccgc-gtgcacgaggc-agggacagag----ggtcggggggaccgcgtgcacgaggcggggatggagtccgggg i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168074783 163 + 169853907 GAGGCGGGGACAGAACTCGAGGGGACCACGTGCACGAGGTGGGGACGGAGCGT-GGGGGGATCCTGTGTACGAGGCTGGGACGGAGTG-TGGGG--GGGACCGAGTGCATGAGGT-GGGGACGGAG----CGT-GGGGGGACCGCGTGCATGAGGCAGGCACGGAGCTCGAGG i rheMac3.chr4 C 0 I 31 s macFas5.chr4 169030572 128 - 170955103 GAGGCGGGGACAGAA-----------------------------------CTC-GAGGGGACCACGTGCACGAGGCGGGGACGGAGCG-TGGGG--GGATCCT-GTGTATGAGGC-TGGGACAGAG----TGTGGGGGGGACCGAGTGCATGAGGCGGGGACGGAGCGTGGGG i macFas5.chr4 C 0 I 31 s papAnu2.chr4 163847370 127 + 165299245 gaggcggggacggag-----------------------------------cgt-ggggggaccgcgtgcacgaggcggggacggagcg-tgggg--ggaccgc-gtgcacgaggc-ggggacggag----cgt-ggggggaccgcgtgcacgaggcggggacggagcgtgggg i papAnu2.chr4 C 0 I 1230 s chlSab2.chr13 96626733 123 + 98384682 GAGGCTGGGACGGAG-----------------------------------TGT-GGGGGAACCGAGTGCATGAAGTGGGGACGGAGCA-TGGGG--GGACCGC-GTGCACAAGGTGGGGGATGGAG----TGT-GGGGGGACCGTGTGCATGAGGCGGGCACGGAGCT----- i chlSab2.chr13 I 229 I 1 s calJac3.chr4 169833814 92 + 171630274 ------------------------------------------------------gggaggac---------------ggggtggggtg-tggggatgacccat-gtgcgggggga-cagagtgggg----tgtgggggTGACC-CGTGCATGAGGGGGGGACGGAGTGG---- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56139035 807 + 122678785 I e nomLeu3.chr3 156252987 511 + 157873769 I a score=95784.000000 s hg38.chr6_KB021644v2_alt 29945 75 + 185823 ----CGGGGGGAC-GCGTGCATGAGGCG--GGGACGGAGCGCGGGGGGAC-GC-GTGCACGAGGCG--GGGACGGAGCGTGGGGGG s panTro4.chr6 170643251 77 + 172623881 ----cgggggGACCGCGTGCACGAGGCG--GGGACGGAGCGTGGGGGGACCGT-GTGCAGGAGGTG--GGGACTGAACGTGGGGGG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172394993 60 + 174210431 ----cggtgg-----------------g--gggacggggggacggggggccgt-gtacacgaggcg--gggacggagcgtgggggG i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168074977 77 + 169853907 -----GGGGGGATCCTGTGTACGAGGCT--GGGACGGAGTGTGGGGGGGACCGAGTGCACGAGGCG--GGGACGGAGTGTGGGGGG i rheMac3.chr4 I 31 C 0 s macFas5.chr4 169030731 76 - 170955103 -----GAGGGGACCGCGGGCAGGAGGTG--GGGACGGAGCGTGGGGGGATCCT-GTGTACGAGGCT--GGGACGGAGTGTGGGGGG i macFas5.chr4 I 31 C 0 s papAnu2.chr4 163848727 76 + 165299245 -----AGGAGGGTCGTGTGCATAAGgcg--gggacggagcgtggggggaccgc-gtgcacgaggcg--gggacggagcgtgggggg i papAnu2.chr4 I 1230 I 140 s chlSab2.chr13 96626857 76 + 98384682 -----GAGGGGACCGCGTGCACGAGGTG--GGGATGGAGCGTGGGGGAATCCT-GTGTACGAGGCT--GGGACGGAGCGTGGGGGC i chlSab2.chr13 I 1 C 0 s calJac3.chr4 169833906 85 + 171630274 CATGTGGGGGTGACCCGTGCGTGGGGGGACGGAGTGGGGTGTGGGGGTGACCC-GTGCGTGGGGGGACGGAGTGGGGTGTGGGAAG i calJac3.chr4 C 0 I 2 e canFam3.chr1 56139035 807 + 122678785 I e nomLeu3.chr3 156252987 511 + 157873769 I a score=330327.000000 s hg38.chr6_KB021644v2_alt 30020 161 + 185823 ACCGCGAGCACGAGGGCGTCGGCTGCTGGGATTTGAAGGAAGCTCTATAAAGCGAGGGAGCAGGGACCC-----CCGTTCCTGCCGGGGGTGCCGGGGTGGGGAAAGCACAGAATCTTCTTGAGGCCCTGGGCTGAGTGAGGGGCGCACAGGAGGCGGGAGCTGCA s panTro4.chr6 170643328 161 + 172623881 ACCGCGAGCACGAGGGCGTCGGCTACTGGGATTTGAAGGAAGCTCTATAGAGCGAGGGAGCAGGGACCC-----CCGTTCCTGCCGGGGGTGCCGGGGTGGGGAAAGCACAGAATCTTCTTGAGGCCCTGGGCTGAGTGAGGGGCGCACAGGAGGCGGGAGCTGCA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172395053 158 + 174210431 ACCGCAAGCACGAGGGCGTCGGCTGCTGGGATTCGAAGGAAGCTCTATAGAGCGAGGGAGCAGGGACCC-----CCGTTCCTGCCAGGGGTGCCGGGGTGGGGAAAGCACAGAACCTTCGTGAGGCCCTGGGCTGA-TGA-GGGCGCACAGGA-GCGGGAGCTGCA i ponAbe2.chr6 C 0 I 253 s rheMac3.chr4 168075054 161 + 169853907 ACCACGTGCACGAGGGCGACGGCTGCTGGGATTTGAAGGAAGCCCTATAGAGCGAGGGAGCAGGGACCC-----CCTTTCCTGCCAGGGGTGCCAGGGTGGGGAAAGCACAGAACCTTCGTGAGGCCCTGGACTGAGTGAGGGGCGCACAGGAGGCGGGAGCTGCA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169030807 161 - 170955103 ACCACGTGCACGAGGGCGACGGCTGCTGGGATTTGAAGGAAGCCCTATAGAGCGAGGGAGCAGGGACCC-----CCTTTCCTGCCAGGGGTGCCAGGGTGGGGAAAGCACAGAACCTTCGTGAGGCCCTGGACTGAGTGAGGGGCGCACAGGAGGCGGGAGCTGCA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163848943 161 + 165299245 ACCGCGTGCACGAGGGCGACGGCTGCTGGGATTTGAAGGAAGCCCTATAGAGCGAGGGAGCAGGGACCC-----CCTTTCCTGCCAGGGGTGCCAGGGTGGGGAAAGCACAGAACCTTCGTGAGGTCCTGGACTGAGTGAGGGGCGCACAGGAGGCGGGAGCTGCA i papAnu2.chr4 I 140 C 0 s chlSab2.chr13 96626933 161 + 98384682 ACCCCGTGCACAAGGGCAATGGCTGCTGGGATTTGAAGGAAGCCCTATAGAGCGAGGGAGCAGGGACCC-----CCTTTCCTGCCAGGGATGCCAGGGTGGGGAAAGCACAGAACCTTCGTGAGGCCCTGGGCTTAGTGAGGGGCGCACAGGAGGCGGGAGCTGCA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169833993 156 + 171630274 -ACCCGTGCACAGGGGTGCCGGCTATTGGGATTTGAAGGAGACAGGATAGGGTGAGGG-GTATGGACCCCCATTCCGTTCCTGCCCGAGGGGATGGGGTGGGG--AGCACACGCCCTTTGTGGGGCACTGGGCTGC-----AGGTGCACAGCGTG-GGGCGCTGCG i calJac3.chr4 I 2 C 0 e canFam3.chr1 56139035 807 + 122678785 I e nomLeu3.chr3 156252987 511 + 157873769 I a score=750.000000 s hg38.chr6_KB021644v2_alt 30181 1 + 185823 C s panTro4.chr6 170643489 1 + 172623881 G i panTro4.chr6 C 0 C 0 s rheMac3.chr4 168075215 1 + 169853907 G i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169030968 1 - 170955103 G i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163849104 1 + 165299245 G i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96627094 1 + 98384682 G i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169834149 1 + 171630274 G i calJac3.chr4 C 0 C 0 e canFam3.chr1 56139035 807 + 122678785 I e nomLeu3.chr3 156252987 511 + 157873769 I e ponAbe2.chr6 172395211 253 + 174210431 I a score=343680.000000 s hg38.chr6_KB021644v2_alt 30182 169 + 185823 GGGTGACTGTGGGGTGGCGGCCGTGGCCAGAGCGCAGGGAGGGAGACGGGAGGCCACCCGGCTGCCGGGTTTCCTCCTGGAGGCTCCGTGGCCATTTTCCTGAGCTAGAAAACGGGCCCACGCCATCAAGGTGGGGACAGGCCCGGGCTCCCTTCTTGTTTTGAATAAA s panTro4.chr6 170643490 169 + 172623881 GGGTGACCGTGGGGTGGCGGCCGTGGCCAGAGCGCAGGGAGGGAGACGGGAGGCCACCCGGCTGCCGGGTTTCCTCCTGGAGGCTCCGTGGCCATTTTCCTGAGCTAGAAAACCGGCCCACGCCATCAAGGTGGGGACAGGCCCGGGCTCCCTTCTTGTTTTGAATAAA i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156253498 166 + 157873769 GGGTGACCCTGGGA-AGCGGCCGTGGCCAGAGCGCAGGGAGGGAGACGGGAGGCAGCCCGGCTGCCGGGTTTCCTCCTGGAGGCTCCGTGGCCG-TTTCCTGAGCTAGAAAAC-GGCCCACGCCTTCAAGGTGGGGACAGGCCCGGGCTCCCTTCTTTTTTTGAAAAAA i nomLeu3.chr3 I 511 C 0 s rheMac3.chr4 168075216 168 + 169853907 CGGTGACCGTGGAGAGGCGGCCCTGGCCAGAGCGCAGGGAGGGACAGGGGAGGCCGCCCGGCTG-CGGGTTTCCTCCTGGAGGCTCCGTGGGCATTTTCCTGAGCTGGAAAACGGACCCGCGCCATCAAGGTGGGGACAGGCCCGGGTTCCCTTCTTTTTTTGAATAAA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169030969 168 - 170955103 CGGTGACCGTGGAGAGGCGGCCCTGGCCAGAGCGCAGGGAGGGACAGGGGAGGCCGCCCGGCTG-CGGGTTTCCTCCTGGAGGCTCCGTGGGCATTTTCCTGAGCTGGAAAACGGACCCGCGCCATCAAGGTGGGGACAGGCCCGGGTTCCCTTCTTTTTTTGAATAAA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163849105 168 + 165299245 CGGTGACCGTGGAGAGGCGGCCCTGGCCAGAGCGCAGGGAGGGACAGGGGAGGCCGCCCGGCTG-CGGGTTTCCTCCTGGAGGCTCCGTGGACATTTTCCTGAGCTGGAAAACGGACCCACGCCATCAAGGTGGGGACAGGCCCGGGCTCCCTTCtttttttGAATAAA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96627095 168 + 98384682 CCGTGACCGTGGAGAGGCGGCCCTGGCCAGAGCGCAGGGAGGGACAGGGGAGGCCGCCCGGCTT-CGGGTTTCCTCCTGGAGGCTCCGTGGGCATTTTCCTGAGCTGGAAAACGGACCCGCACCATCAAGGTGGGGACAGGCCCGGGCTCCCTTCTTTTTTTGAATAAA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169834150 163 + 171630274 GGGCAGCCGTGGGA-GACGCAGGTGTCTGGAGCGCAGGGAGG---AGCGGAGGCCGCCCGGCTGCGGAGTTTCCTCTTGGGTGCGCTGTGGGCATCTTCCTGGGCTAG-AAACGGGGCCACACCATGGAGGTGGGGACGGG-CCGGGCTCCCTTCTTTTTCTGGAAAAA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56139035 807 + 122678785 I e ponAbe2.chr6 172395211 253 + 174210431 I a score=766015.000000 s hg38.chr6_KB021644v2_alt 30351 288 + 185823 GACCATGTTTTCCACGT-GGCGTAAGACATGGCGTGATGACACTTAACTTCGCACTACTAAAAATACCTTAAGAGATACTTATCTTGTTTAAATAATTTGGAATTATGGCTCCACATTAAAGAAAACAAACTCCAAGCAACAGCTTTTCTTTCTCTCCTTCCCTTGTGAGGTCCGCCGGCAAACCACCAATGTTTCCGTATTCAAGGCCAAAATACCCTAGGGAGGGACCGGACTCCTTTTATTCTTTACATAGCATTGTCAGTGTTTGGGGACATTGGAAGGAAGCTA s panTro4.chr6 170643659 288 + 172623881 GACCATGTTTTCCACGT-GGCATAAGACATGGCGTGATGACACTTAACTTCGCACTACTAAAAATACCTTAAGAGATACTTAGCTTGTTTAAATAATTTGGAATTATGGGTCCACATTAAAGAAAACAAACTCCAAGCTACAGCTTTTCTTTCTCCCCTACCCTTGTGAGGTCCGCCGGCAAACCACCAATGTTTCTGTATTCAAGGCCAAAATACCCTAGGGAGGGACCGGACTCCTTTTATTCTTTACATAGCATTGTCAGTGTTTGGGGACATTGGAAGGAAGCTA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172395464 287 + 174210431 GACCATGTTTTCC-CGT-GGCATAAGACATGGCGTGATGACACTTAACTTCGCACTACTAAAAATACCTTAAGAGATACTTATCTTGTTTAAATAATTTGGAATTATGGGTCCACATTAAAGAAAACAAACTCCAGGCAACAGCTTTTCTTTCTCCCCTACCCTTGTGAGGTCCGCCGGCAAACCACCAATGTTTCTGTATTCAAGGCCAAAATACCCTAGGGAGGGACCGGACTCCTTTTATTCTTTACATAGCATTGTCAGTGTTTGGGGACATTGGAAGGAAGCTA i ponAbe2.chr6 I 253 C 0 s nomLeu3.chr3 156253664 280 + 157873769 GACCATGTTTTCCACGTGGGCATAAGACATGACGTGATGACGCTTAACTTCGCACTACTAAAAATACCTTAAGAGATACTTATCTTGTTTAAATAATTTGGAATTATGGGTCCACAGTAAAGAAAACAGACTCCAAGCAACAGCTTTTCTTTCGCCCCTACCCTTGTGAGGTCCGCCGGCAAACCACCAATGTTTCTGTATTCAAGGCCAAAATACCCTAGGGAGGGACCGGACCCCTTTTATTCTTTACATAGCATTGTCAGTGTTTGGGGACCTTAG---------A i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168075384 279 + 169853907 GACCATGTTTTCCACGC-GGCACAAAACATGGCGTGATGACACTTAACTTCGCACTACTAAAAATACTTGAAGAGATACTTATCTTGTTTAAATAATTTGGAATTATGGGTCCACATTAAAGAAAACAGACTCTAAACAACAGCTTTTCTTTCTCCTCTACCCTTGTGAGGTCAACCGGCAAACCACCAAGGTTACTGTATTCAAGGTCAAAATACCCTAGGGAGGGACCGAAGTCCTTGTATTCTTTACATAGCATTGTCAGTGTTTGGGGACCTTGG---------A i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169031137 279 - 170955103 GGCCATGTTTTCCACGC-GGCACAAAACATGGCGTGATGACACTTAACTTCGCACTACTAAAAATACTTGAAGAGATACTTATCTTGTTTAAATAATTTGGAATTATGGGTCCACATTAAAGAAAACAGACTCTAAACAACAGCTTTTCTTTCTCCTCTACCCTTGTGAGGTCAACCGGCAAACCACCAAGGTTACTGTATTCAAGGTCAAAATACCCTAGGGAGGGACCGAAGTCCTTGTATTCTTTACACAGCATTGTCAGTGTTTGGGGACCTTGG---------A i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163849273 279 + 165299245 GACCATGTTTTCCACGC-GGCACAAAACATGGCGTGATGACACTGAACTTCGCACTACTAAAAATACTTGAAGAGATACTTATCTTGTTTAAATAATTTGGAATTATGGGTCCACATTAAAGAAAACAGACTCTGAACAacagcttttctttctcctctaccCTTGTGAGGTCAACCGGCAAACCACCAAGGTTACTGTATTCAAGGTCAAAATACCCTAGGGAGGGACCGAAGTCCTTGTATTCTTCACATAGCATTGTCAGTGTTTGGGGACCTTGG---------A i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96627263 279 + 98384682 GACCATGTTTTTCACGC-GGCACAAAACATGGCCTGATGACACTTAACTTCGCACTACTAAAGATACTTTAAGAGATACTTATCTTGTTTAAATAATTTGGAATTATGGGTCCACATTAAAGAAAACAGACTCTAAGCAACAGCTTTTCTTTCTCCTCTACCCTTGTGAGGTCAACCGGCAAACCACCAAGGTTTCTGTATTGAAGGTCAAAATACCCTAGGGAGGGACCGAAGTCCTTTTATTCTTTACATAGCATTGTCAGTGTTTGGGGACCTTGG---------A i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169834313 268 + 171630274 GACCATGTACTCCCCGC-AGCGTAAGGAATGGC--GGTGACGCTT---CCCGCGC-ACTGACAGTGCTTTGGGAGATGCTTACCTTGTTTAAATAATTAGGAATTTCGGGTCCTCATTAAAGAAAACAGACTCCAGGCAACAGCTTTTCTTTCCCTCCCGCCCGGGTGAGGTCAGCGGGCAAACGGCCAGCGTTTCTGTATTCA---CCAGAACGCCCCAGGGAGGGCC--GAGGCCTTCCATTCTTTGCATAGTATTGTGAGTGTCTGGGGGCCCTGG---------A i calJac3.chr4 C 0 C 0 e canFam3.chr1 56139035 807 + 122678785 I a score=3350657.000000 s hg38.chr6_KB021644v2_alt 30639 1110 + 185823 AGGAAGCTATAGTGACAAACTCCT-GCCACTCTCGCGTTCAGAGGTCTGCAGGACAGCAGGCTCGTGA---GCCGGGGAGC----GGGC------TGCA-----------TCCCAAAGATGCCCAGGCTTCC----------AGGTG--------CCTGAAACCTGCAGGGATCAGTCTAATTGCCTTTCTCCACGATACCATTGCTCTTAAGAAGTG-TT---------TTGGCAATGACTTTTAACAATAGGACGATGGCTGAGTTCCCAGATCTGCATTACGGAGGCATTTTAAAAGCCCACATCTTCCTCAGCTACACCGAGTCTC--TCTCCTGATGTCAGTGCTGTGTGGCTGAAAATCAGCTTTTTTAGAAGGCCGTTTAATGTAGAGATTTATAGGGCCGCATGAACGCTGCATTTAAGAAGAATTTTTTT---AAAACTATAAAGTATGACATATTTAATGGGGATGGGGCAATGTGATATGATGGCTAAGGCTTTGTAAAACTTTTAAATAAAATTAACACACATAACTTTTAATGCCCCCATGTCAAAGCATCTTAACATTATAAGAAGTAAACACATAAAATCCCATCCCCTTTCAAAGCCGCACTCAAGTTTGGATTCTTAGCTCAGTTTATCAAACGCTTTTTATAAGCCTGGAATGATCACAGAGATGATACTTTTTAATGATGCTAACGTTCTGGTTTGATGTTTTTAATCCAAAGAGGTTAGGAGGTGAAATCTGTACTAACCctattacttctgatacgagctcagccgctctggctcggttataagcattgtttgcatggtctgtct-tttcatccttttactctcaacttgtttgtgtctttcatcctaaa------gACATCCTGCCTCCTcccgttccatgctcacatgtgaccaaatgaagcagacaaaacccgaggctgcttatgaggctgattgcaaagccacagtgcagccaggct-ccctgccccgagcgtctctgtgctgggacaggctccaggcccctcgagtctgc---taagcccttccccaagctttagccctgtttcttgtatcactttaattccatttcttatctcgacatcttcagcagggaaggctgatttaccagagaga-gagggagagagacaggacatgagaacactgTTGCCTGGGGTT s panTro4.chr6 170643947 1109 + 172623881 AGGAAGCTATAGTGACAAACCCGT-GCCACTCTCGCATTCAGAGGTCTGCAGGACAGCAGGCTTGTGA---GCCGGGGAGC----GGGC------TGCA-----------TCCCAAAGATGCCCAGGCTTCC----------AGGTG--------CCTGAAACCTGCAGGGATCAGTCTAATTGCCTTTCTCCACGATACCATTGCTCTTAAGAAGTG-TT---------TTGGCAATGGCTTTTAACAATAGGACGATGGCTGAGTTCCCAGCTCTGCATTACGGAGGCATTTTAAAAGCCCACATCTTCCTCAGCTACACGGAGTCTC--TTTCCTGATATCAGTGCTGTGTGGCTGAAAATCAGCTTTTTTAGAAGGCCGTTTAATGTAGAGATTTATAGGGCCGCATGAACACTGCATTTAAGA-GAATTTTTTT---AAAACTATAAAGTATGACATATTTAATGGGGACGGGGCAATGTGATATGATGGCTAAGGCTTTGTAAAACTTTTAAATAAAATTAACACACATAACTTTTAATGCACCCATGTCAAAGTATCTTAAAATTATAAGAAGTAAACACATAAAATCCCATCCCCTTTCAAAGCCGCACTGAAGTTTGGATTCTTAGCTCAGTTTATCAAACGCTTTTTATAAGCCTGGAATGATCACAGAGATGATACTTTTTAATGATGCTAACGTTCTGGTTTGATGTTTTTAATCCAAAGAGGTTAGGAGGTGAAATCTGTACTAACCctattacttctgatacgagctcagccgctctggctcggttataagcattgtttgcatggtctgtct-tttcatccttttactctcaacttgtttgtgtctttgatcctaaa------gACATCCTGCCTCCTcccgttccatgctcacatgtgaccaaatgaagcagacaaaacccgaggctgcttatgaggctgattgcaaagccacagtgcagccaggct-tcctgacccgagcgtctctgtgctgggacaggctccaggcccctcgagtctgc---taagcccttccccaagctttagccctgtttcttgtatcactttaattccatttcttatctcgacatcttcagcagggaaggctgatttaccagagaga-gagggagagagacgggacatgagaacactgttgcctggggtt i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172395751 1106 + 174210431 AGGAAGCTATAGTGACAAACTCCT-GCCACCCTCGCCTTCAGAGGTCTGCAGGACAGCAGGCTTGTGA---GCCGGGGAGC----GGGC------TGCA-----------TCCCAAAGATGCCCAGCCTTCC----------AGGTG--------CCTGAAACCTGCAGGGATCAGTCTAATTGCCTTTCTCCACCATACCATTGCTCTTACGAAGTG-TT---------TTGGCAATGACTTTTAACAATAGGACAATGGCTGAGTTCCCAGGTCTGCATTACGGAGGCATTTTAAAAGCCCACATCTTCCTCAGCTACACCGAGTCTC--TTTCCTGCTGTCAGTGCTGTGTGGCTGAAAATCAGCTTTTTTAGAAGGCCGTTTAATGTAGAGATTTATAGGGCCGCATAAACACTGCATTTAAGAAGAATTTTTTT---AAAACTATAAAGTATGACATATTTAATGGGGATGGGGCAATGTGATACGATGGCTAAGGCTTTGTAAAACTT-----TAAAATTAACACACATAACTTTTAATGCACCCATGTCAAAGCATCTTAAAATTATAAGAAGTAAACACATAAAATCCCATCCCCTTTCAAAGCCGTACTCAAGTTTGGATTCTTAGCTCAGTTTATCAAACGCTTTTTATAAGCCTGGAATGATCACAGAGATGATACTTTTTAATGATGCTAACGTTCTGGTTTGATGTTTTTAACCCAAAGAGGTTAGGAGGTGAAATCTGTACTAACCCTACTACCtctgatacgagctcagccgctctggctcggctagaagcattgtttgcatggtctgtct-tttcatccttttactctcaacttgtttgtgtctttgaacctaaa------gACATCCTGCCTGGTCCCGTTCCATGCTCACGTGTGCCCAAACGAAGCAGACAAAACCCGAGGCTGCTTATGAGGCTGATTGCAAAGCCACGGTGCAGCCAGGCTCCCCTGCCCTAAGCCTCTCTGTTCTGGGACAGGCTCCAGGCCCCTCGAGTCTGC---TAAGCCCTTCCCCAAGCTTTAGCCCTGTTTCTTGTATCACTTTAATTCCATTTCTTATCTCAACATCTTCAGCAGGGTAGGCTGATTTACCAGAGAGA-GAGGGAGAGAGACAGGACATGAGAACACTGTTGCCTGGGGTT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156253944 1104 + 157873769 AGAAAGCTATAGTGA------------CACCCTCGCGTTCGGAGGTCTGCAGGACAGCAGGCTTGTGA---GCCGGGGAGG----GAGCGGGCTGTGCT-----------GCTTGGAGATGCCCAGCCTTCC----------AGGTG--------CCTGAAACCTGCAGGGATCAGTCTAACTGCCTTTCTCCATGATACCATTGCTCTTACGAAGTG-TT---------TTGGCAATGACTTTTAACAATAGGACGATGGCTGAGTTCCCAGGTCTGCATTACGGAGGCATTTTAAAAGCCCACATCTTCCTCAGCTACACTGAGTCTCTTTTTCCTGCTGTCAGTGCTGTGTGGCTGAAAATCAGCTTTTTTAGAAGGCCGTTTAATGTAGAGATTTATAGGGCCGTGTAAATACTGCATTTAAGAAGAATTTTTTT---AAAACTATAAAGTATGACATATTTAATGGGG-TGGGGCAATGTGATATGATGGCTAAGGCTTTGTAAAACTTTTAAATAAAATTA--ACACATAACTTTTAATGCACCCATGTCAAAGCATCTTAAAATTATAAGAAGTAAACACATAAAATCCCATCCCCTTTCAAAGCCTCACTCAAGTTTGGATTCTTAGCTTAGTTTATCAAACGCTTTTTATAAGCCTGGAATGATCACAGAGATGATACTTTTTAATGATGCTAACGTTCTAGTTTGATATTTTTAATCCAAAGAGGTTAGGAGGTAAAATCTGTACTAACCctattacttctgctacgagctcagccgctctggctcggttataaggattgcttgcacggtctgtct-tttcatccttttactctcaacttgtttgtgtctttgaacctaaa------AACATCCTGCCTTGTcccgttccatgctcacatgtgcccaaaggaagcagacaaaacccgaggctgcttatgaggctgattgcaaagccacggtgccgtcaggct-ccctgccccgagcctctctgtgctgggacaggctccaggcccctcgagtctgc---taagcccttccccaagctttagccctgtttcttgtttcactttaattccatttcttatctcgacatcttcagcagggaaggccgatttaccagagaga-gagggagagagacaggacatgagaacaccgttgcctggggtt i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168075663 1104 + 169853907 AGGAAGCTATAGTGACAAACCCCG-GCCACCCTCGCCTTCGGAGTTCTGCAGGACAACAG--------------AAGGAGC----AGGC----TGTGCT-----------GCTTTGAGATGCCCAGCCTTCC----------AGGTG--------CCTGAAACCTGCCGGGATCAGTGTAATTGCCTTTCTCCAGGATACCATTGCTCTTATGAAGTG-TT---------TTGGCAATGACTTTTAACAATAGGACGATGGCTGAGTTCCCAGGTCTGCATTACGGAGGCATTTTAAAAGCCCACATCTTCCTCAGCTACACCGAGCCTCTTTTTCAGGCTGTCAGTGTGGTGTGGCTGAAAATCAGCTTTTTTAGAAGGCCGTTTAATGTAGTTATTTATAGGGCTGCATAAACACTGCATTTAAGAAGAATTTTTTT-AAAAAACTATAAAGTATGACATATTTAATAGGGATGGGGCAATGCGATATGATTGCTAAGGCTTTGTAAAACTTTTAAATAAAATTAACACACATAAC-TTTAATGCACCCATGCCACAGCATCTTAAAATCATAAGAAGTAAACACATAAAATCCCATCCCCTTTCAAAGCCGCACTCAAGTTTGGATTCTTAGCTCAGTTTATCAAACGCTTTTTATAAGCCTGGAATGATCACAGAGATGGTAGTTTTTAGTGATGCTAACATTCTGGTTTGATGTTTTTAATCCAGAGAGGTTAGGAGGTGAAATCTGTACTAACCctattacttctgatatgagctcagccgctctggcttggttataagcattgtttgcatgggctgact-tttcattctcttattcacaacttgtttgtgtctttcaacctaaa------gACACCCTGTCTCACCCTGTTCCATGctcacatgtgaccaaacgaagcagacaaaacccgaggctgcttatgaggctgattgcaaagccacagtgcagccaggct-ccctgccccaagcctctctgtgctgggacaggttccaggcccctggagcctgc---taagctcttccccaagctttagccctgtttcttgtatcactttaattccatttcttatctcgacatcttcagcggggcaggccgatttaccagagagg-gagggagggagataggacatgagaacactgtcgcctggggtt i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169031416 1104 - 170955103 AGGAAGCTATAGTGACAAACCCCG-GCCACCCTCGCCTTCGGAGTTCTGCAGGACAACAG--------------AAGGAGC----AGGC----TGTGCT-----------GCTTTGAGATGCCCAGCCTTCC----------AGGTG--------CCTGAAACCTGCCGGGATCAGTGTAATTGCCTTTCTCCAGGATACCATTGCTCTTATGAAGTG-TT---------TTGGCAATGACTTTTAACAATAGGACGATGGCTGAGTTCCCAGGTCTGCATTACGGAGGCATTTTAAAAGCCCACATCTTCCTCAGCTACACCGAGCCTCTTTTTCAGGCTGTCAGTGTGGTGTGGCTGAAAATCAGCTTTTTTAGAAGGCCGTTTAATGTAGTTATTTATAGGGCTGCATAAACACTGCATTTAAGAAGAATTTTTTA-AAAAAACTATAAAGTATGACATATTTAATAGGGATGGGGCAATGCGATATGATTGCTAAGGCTTTGTAAAACTTTTAAATAAAATTAACACACATAAC-TTTAATGCACCCATGCCACAGCATCTTAAAATCATAAGAAGTAAACACATAAAATCCCATCCCCTTTCAAAGCCGCACTCAAGTTTGGATTCTTAGCTCAGTTTATCAAACGCTTTTTATAAGCCTGGAATGATCACAGAGATGGTAGTTTTTAGTGATGCTAACATTCTGGTTTGATGTTTTTAATCCAGAGAGGTTAGGAGGTGAAATCTGTACTAACCctattacttctgatatgagctcagccgctctggcttggttataagcattgtttgcatgggctgact-tttcattctcttattcacaacttgtttgtgtctttcaacctaaa------gACACCCTGTCTCACCCTGTTCCATGCTCACATGtgaccaaacgaagcagacaaaacccgaggctgcttatgaggctgattgcaaagccacagtgcagccaggct-ccctgccccaagcctctctgtgctgggacaggttccaggcccctggagcctgc---taagctcttccccaagctttagccctgtttcttgtatcactttaattccatttcttatctcgacatcttcagcggggcaggccgatttaccagagagg-gagggagggagataggacatgagaacactgtcgcctggggtt i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163849552 1104 + 165299245 AGGAAGCTATAGTGACAAACCCCT-GCCACCCTCGCCTTTGGAGTTCTGCAGGACAACAG--------------AAGGAGC----AGGC----TGTGCT-----------GCTTTGAGATGCCCAGCCTTCC----------AGGTG--------CCTGAAACCTGCCGGAATCAGTGTAATTGCCTGTCTCCAGGATACCATTGCTCTTATGAAGTGTTT---------TTGGCAATGACTTTTAACAATAGGACGATGGCTGAGTTCCCAGGTCTGCATTACTGAGGCATTTTAAAAGCCCACATCTTCCTCAGCTACACCGAGCCCCTTTTTCAGGCTGTCAGTGCGGTGTGGCTGAAAATCAGCTTTTTTAGAAGGCCGTTTAATGTAGTTATTTATAGGGCTGCATAAACACTGCatttaagaagaattttttt---taaactataaagtaCGACATATTTAATAGGGATGGGGCAATGCAATATGATTGCTAAGGCtttgtaaaacttttaaatgaaattaacacACATAACTTTTAATGCACCCATGCCACAGCATCTTAAAATCATAAGAAGTAAACACATAAAATCCCATCCCCTTTCAAAGCCGCACTCAAGTTTGGATTCTTAGCTCAGTTTATCAAACGCTTTTTATAAGCCTGGAATGATCACAGAGATGGTAGTTTTTAGTGATGCTAACATTCTGGTTTGATGTTTTTAATCCAGAGAGGTTAGGAGGTGAAATCTGTACTAACCCTATTACTTCTGATATGAGCTCAGCCACTCTGGCTTGGTTATAAGCATTGTTTGCATGGGCTgact-tttcattctcttattcaCAACTTGTTTGTGTCTTTCAACCTAAA------GACACCCTGTCTCACCCCGTTCCATGCTCACATGTGACCAGACGAAGCAGACAAAACCCAAGGCTGCTTATGAGGCTGATTGCAAAGCCACAGTGCAGCCAGGCT-CCCTGCCCCAAGCCTCTCTGTGCCGGGACAGGTTCCAGGCCCCTGGAGCCTGC---TAAGCTCTTCCCCAAGCTTTAGCCCTGTTTCTTGTATCACTTTAATTCCATTTCTTATCTCAACATCGTCAGCGGGGTAGGCCGATTTaccagagaga-gagggagggagatagGACATGAGAACACTGTCGCCTGGGGTT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96627542 1117 + 98384682 AGGAAGCTATAGTGACAAACCCCT-GCCACCCTCGCCTTCGGAGTTCTGCAGGACAGCAGGCTTGTGA---GCCGGGGAGC----AGGC----TGTGCT-----------GCTTTGAGATGCCCAGCCTTCC----------AGGTG--------CCTGAAACCTGCCGGGATCAGTGTAATTGCCTTTCTCCACCATACCATTGCTCTTATGAAGTG-TT---------TTGGCAATGACTTTTAACAATAGGACGATGGCTGAGTTCCCAGGTCTGCATTACTGAGGCATTTTAAAAGCCCACATCTTCCTCAGCTACACCGAGCCTCTTTTTCAGGCTGTCAGTGCGGTGTGGCTGAAAATCAGCTTTTTTAGAAGGCCGTTTAATGTAGTTATTTATAGGGCTGCATAAACACTGCATTTAAGAAGATTTTTTTTAAAAAAACTATAAAGTATGGCATATTTAATAGGGATGGGGCAATGTGATATGATTGCTAAGGCTTTGTAAAACTTTTAAATAAAATTAACACACATAACTTTTAATGCACCCATGCCACAGCATCTTAAAATCATAAGAAGTAAACACATAAAATCCCATCCCCTTTCAAAGCCGCACTCAAGTTTGGATTCTTAGCTCAGTTTATCAAACGCTTTTTATAAGCCTGGAATGATCACAGAGATGGTACTTTTTAGTGATGCTAACGTTCTGGTTTGATGTTTTTAATCCAGAGAGGTTAGGAGGTGAAATCTGTACCAACCctattacttctgatacaagctcagccgctctggcttggttataagcattgtttgcatggtctgact-tttcattctcttagtctcaacttgtttgtgtctttcaacctaaa------gACACCCTGTCTCACCCCGTTCCATGCTCACATGTGACCATATGAAgcagacaaaacccgaggctgcttatgaggctgattgcaaagccacagagcagccaggct-ccctgccccaagcctctctgtgctgggacaggttccagggccctggagcctgc---taagctcttccccaagctttagccctgtttcttgtatcactttaattccatttcttatctccacatcttcagcggggcaggccgatttaccagagaga-gagggagggagataggacatgagaacactgttgcctggggtt i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169834581 1087 + 171630274 CGGAAGCCCTAGTGACAAACTCCA-GCATCCC----------AGGTCTGCAGGGCGGCAGGCTTGTGAGGCGACAGGGAGC----CGCC------TTCCCACAGCCCCGGGCGCAGGGCTGCCGGGGCCTCC----------AGCGG--------CCCGAGGCCTGCAGGGACCAGCCTAACCGCCCTTCTAAGCGATGCCATTGCTCTTGCAAAGCA--T---------TTGGCCATGATTTTTAACAGTGGA--GACGGCCGAGCTCCCAGGTCTGCATTTCGCTGTCATGTTAAAAGGCCACATCTTCCGTAGCTAAGCC-AGCCTCTTTTCCCTCCTGTCAGTGCGTCCTGGCTGAAAATTAGCTTTTATAGACGGCTGGTTAATGTACTGATTTATAGGGCTGCATAAACACTGCATTTAAGAAGAAAGTTTA----AAAACCATAAAGTATAACATATTTAATGGGGATGGGGCAAACTGATATGATTGCTAGGGCTTTGTAAAACTTTTAAATAAAATGAACACACATAACTTTTAATGCACCCCTGTCAAAGCATCTTAAAATCAT---AAGTAAACACATAAAATCCCA-CCCCTTTCAAAGCTGCACTCAAGTTTAGATTCTTAGCTCAGTTTATCAAAGGCTTTTTGTAAGCTTGGAATGATCACAGAAATG---CTTTTTAATGACGCTAACGTTCTGGTTTGATG-TTTTAATCC--GGAGGTTAGAAGGTGACCTCTCTGCTAACCctgtt-cttctgatagcagctcagccgctgcggctgggttgtaagcactgtgtgcacggcctgtctcttccatcctttgactctcaacttgtttgtgtctttgaacctaaa------gAC--CCTGCCTCCTCCCATTCCATGCTCACATG--------AGAAGCAGAGAAAACGGGGGGCTGCTTATGAGGCTCATTGCAAAGGTCGGGTGCAGCCAGGCT-CCCTGCCCGGAAC--CTCTGTGCTGGGACAGGCTCCAGG-CCCTCCAGCCTGCTAATAATCCTTTCTCCAAGCTTTAGCCCTGTTTCTTGTA-----TTAATTTCATTTCTTATTTCAATCTCTTCAGCAGGGAAGGCTGATTTAGCAGAGAGAGGAGAGAGAGACACAGGACGCGAGAACTCTGTTGCCTCGTGTT i calJac3.chr4 C 0 I 35 s canFam3.chr1 56139842 1078 + 122678785 AGGAAGCTGAGGGGACATGTCCCTGGCTGCCCTTGCCCTGGGAGACCTTGGGGACAGCAGGCTTTGTA---AGCGTGGAACTGTGGGGA------TGCT-------------------ATGGCCACTCTGCCCGTCCCTGGAAGGTGGGATGGCTCCCAAGATATATAGGGACCAGGCCAATTACATCTCTCCAGGACATGGCTGGTCTTACGAGTGA-TTGTAAGACAATTGGCAATGATTTTGTGAAATGGGATGACTGCTCTGTCCTCAGTCCTATATGCTGCTAGCGGCTTGGAAAGCTCGATTTTCTGTAGCTAC---------------CCAATTGTTACTGTTTAGCACTTGAAAATTAGCATT--TAGAAGGTCATTTAGTATCGTTATTTATGGAGAAGAATAAACAGTGCACTTAAAA--AATTTTCTA---AAAACTATAAA-TATGAC--ATTTAACAGGGATGGAGCAATGAGATGGGATTGCCAAGGCTTCATAAAACTT-TACATAAAATTAACACACATAGCTTTTAATACACCCCTGGCAAAGCGTCTTAAAATTATAAGAAATAAACACATACAGTCTCAGCCCCTTTTAAAGCTGCAATAAAGCTTGTGTTCTTATCTCAGTTTATCAAATGCCTTTTATAAGCCTGGAATGATCTCAGAGATTGTATGTTTTAATAATACTAATGTTCTTGTTTGATGTTTTCCATCTAAAGAGACCAGAA-GTGAAATCTCTACAAAGTAAATGACTtctgatagtgatttcaccgctgcttctctgttgtgggcact-tttgca-----tattt-tctccatccttcactttcaatctgtttgtatctctgaatctcaagtgtTTGACATCCAGTATTATCTTATTTCATTcctacgtgtgccaagaa-----aaacagcacgcacagctgcttatcaggttctctgc--agctgcaggatggccaggccaccccgccccggg--tctctgcacggtggtcagccccaggcctct-acgtctgc---cgagcac---------------ccttgtttcttgca-cagcttgactttgtcatctgtgacagcaccatcagagggtgagggtgatggagcagagaga-ga---------cccacacacgggacagacattgcccggggct i canFam3.chr1 I 807 C 0 a score=1382455.000000 s hg38.chr6_KB021644v2_alt 31749 551 + 185823 G-AAAAAACAGTTTTTTTTTCCTGTGTATTTGTACTCCATTTTTTTGTTTTGACAGATTTTGGGGAGTC-----taatttacataacataaaattcaccttttttaagtgtgcaattcaatgattttcttgtaaatgtaccgcattgt--aaccactaccacagtacaattttggaacatttctaccacccgagatgatctctcgcacgcagttgcaggcaatcctcatttccacct-aaggcctggctaacctctcctctaggttttacctccacaa-atgtcttttctggagatttcctatcaacaggatgctgtaaattgtcttctatttttagcttcattcactgagcacagtgct-ttgaggttcaaccccattgtagcacatagtgccttcatctttgttactgaatggcattccatcgcgtggatataccac-agtcatttatggagtcacagg-ggatgagc-atttgggttgcttccacttcttagttatgatggctaatggcactatgaacactactgtgcaagtctttatgtggacagaaggttttatttAttt s panTro4.chr6 170645056 551 + 172623881 c-aAAAAATAGTTTTTTTTTCCTGTGTATTTGTACCCCATTTTTTTGTTTTGACAGATTTTGGGGAGTC-----taatttacataacataaaattcaccttttttaagtgtgcaattccatgattttcttgtaaatgtaccgcattgt--aaccactaccacagtacaattttggaacatttctaccacccgagatgatctctcgcacacagttgcaggcaatcctcatttccacct-aaggcctggctaacctctcctctaggttttacctccacaa-atgtcttttctggagatttcctatcaacaggatgccgtaaattgtcttctgtttttagcttcattcactcagcacagtgct-ttgaggttcaaccccattgtagcacatagtgccttcatctttgttactgaatggcattccatcgtgtggatataccac-agtcatttacggagtcacagg-ggatgagc-atttgggttgcttccacttcttagttatgatggctaatggcacaatgaacactactgtgcaagtctttatgtggacagaaggttttatttAttt i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172396857 544 + 174210431 C-AAAAAATAGTTTTTTTTTCCTGTGTATTTGTACCCCATTTTTTT-TTTTGATGGATTTTGGGGAGTC-----taatttacataacataaaattcaccttttttaagtgtgcaattcagtgattttcttgtaaatgtacagcattgt--aaccactaccacagtaccattttagaacatttctaccacccgagatgatctctcgcacccagttgcaggcaatcctcatttccacct-gaggcccggttaacctctcctctaggttttacctccacaa-atgtcttttctggagatttcctatcaacaggatgccgtaaattgtcttctgtttttagcttcattcactcagcacagtgcc-ttgaggttcagccccactgtagcacatagtgccttcatctttgttactgaatggcattccattgtgtggatataccac-agttgtttacggagtcacagg-gaatgagc-atttggattgcttccacttcttagttatgacggcc-atggcactatgaaca-----gtgcaagtctttatgtggacagaaggttttatttAttt i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156255048 556 + 157873769 c-aAAAAATAGTTTTTTTTTCCTGTGTATTTGTACCCCATTTTTTTGTTTTGACAGTTTTTGGGGAGTCTAatttaatttacataacataaaattcaccttttttaagtgtgcaattcaatgattttcttgtaaatgtacagcattgt--agccactaccacagtacaattttagaacatttctaccgcccgggatgatctctcgcatccagttgcaggcaatccgcatttccacct-aagacccggctaacctctcctctaggctttacctccacca-atgtcttttctggagatttcctatcaacaggatgccgtaaattgtcttctgtttttagcttcattcactcagcacagtgct-ttgaggttcaaccccattgtagcacatagtgccttcgtctttgttactgaatgtcactccatcgtgtggctataccac-agtcatttacggagtcccagg-ggatgagc-atttgggttgcttccacttcttagttatgatggctaacggcactattaacactactgtgcaagtctttatgtggacagaaggttttatttAttt i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168076767 550 + 169853907 c-aaaaaataggtttttttt-ctgtgtatttgtaccccatttttttgtgttgacAGATTTTGGGGAGTC-----taatttacataacataaaattcacctttttaaagtgtgcaattcaataattttcttgtaaatgtacagcgttgt--aaccactaccaccgtacaattttagaagatttctaccacccgaggtgatctctcacacccagttacaggcaatcctcatttccacct-aagacccggctaacctctcctctaggttttacctccacaa-atgtcttttctggagatttcctatcaacaggatgccgtacattgtcttctgttgttagcttcattcactcagcacagtgct-gtgaggttcaaccccattgtatcacatagttccttcatttttgttactgaatagcattccatcacggggatataccac-agtcatttatggagtcatggg-ggatgacc-ctttgggttacttctacttcttagttatgatggctagtggcgctatgaacactactgtgcaagtctttatgtggacagaaggttttatttagtt i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169032520 550 - 170955103 c-aaaaaataggtttttctt-ctgtgtatttgtaccccatttttttgtgttgacAGATTTTGGGGAGTC-----taatttacataacataaaattcacctttttaaagtgtgcaattcaataattttcttgtaaatgtacagcgttgt--aaccactaccaccgtacaattttagaagatttctaccacccgaggtgatctctcacacccagttacaggcaatcctcatttccacct-aagacccgactaacctctcctctaggttttacctccacaa-atgtcttttctggagatttcctatcaacaggatgccgtacattgtcttctgttgttagcttcattcactcagcacagtgct-ttgaggttcaaccccattgtatcacatagttccttcatttttgttactgaatagcattccatcacggggatataccac-agtcatttatggagtcacggg-ggatgacc-ctttgggttacttctacttcttagttatgatggctagtggcgctatgaacactactgtgcaagtctttatgtggacagaaggttttatttagtt i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163850656 548 + 165299245 c-aaaaaataggtttttttt-ctgtgtatttgtacCCCAtttttttGTGTTGACAGATTTTGGGGAGTC-----taatttacataacataaaattcacctttttaaagtgtgcaattcaatAATTTTCTTGTAAATGTACAGCGTTGT--AACCACTACCACCGTACAATTTTAGAAGATTTCTACCACCCGAAGTGATCTCTCACACCCAGTTACAGGCAATCCTCATTGCCACCT-AAGACCCGGCTAACCTCTCCTCTAGGTTTTACCTCCACAA-ATGTCTTTTCTGGAGATTTCCTATCAACAGGATGCTGTGCATTGTCTTCTGTTGTTAGCTTCATTCACTCAGCACAGTGCT-TTGAGGTTCAATCCTATTGTGTCACATGGTTCCTTCATTTTTGTTACTGAATAGCATTCCATCACGGGGATATACCAC-AGTCATTTACGGAGTCACGGG-GGATGACCGCTTTGGGTTACTTCTACTTCTTAGTTATGATGGCTAGTGGCGCTATGAACACTACTGTGCAAGTCTTTATGTGGAC---AGGttttatttagtt i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96628659 551 + 98384682 caAAAAAATAGTTTTTTTTT-CTGTGTATTTGTACCCCATTTTTTTGTGTTGACAGATTTTGGGGAGTC-----taatttacataacataaaattcacctttttaaagtgtgcaattcaataattttcttgtaaatgtacagcgttgt--aactactaccacagtacaattttagaagatttctaccacccgaggtgatctctcacacccagttacaggcaatcctcatttccacct-aagacccggctaacctctcctctaggttttacctccacaa-atgtcttttctggagatttcctatcaacaggatgccgtacactgtcttgtgttgttagcttcattcactcagcacagtgct-ttgaggttcaaccccattgtgtcacatagttccttcatttttgttactgaatagcattccatcacggggatataccac-agtcatttacggagtcatggg-ggatgacc-ctctgggttacttctacttcttagttatgatggctagtggcgctatgaacactactgtgcaagtctttatgtggatagaagattttatttAGtt i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56140920 515 + 122678785 c-aggtaacgggctctttcctct---catttgcac-cTGGAATTTTGTTTGaacagctcttttgaggtc-----ggatttacataacgtaaaattcacctcttttaaacgtacagttcaaaggatttttaataaatgtattgagttgtgcaaccatcaccactatcca----------------accacccaaaatgatctcacgtacctacatttccgc---cctcatttccacctgaagccccaagcaaccacatatctactttttgtctctataatttgccttttctggacatttcatgcaaataggacacagcatattgtcttttgcatttagcttcattcgtttagcgtagaactattcaagttcacc----------cacatggtttatttgtttttattcctgaatagtattccactgtacgggcgtcccatgacttgtttatccattcacaagctggtgaac-atttcagttgtttccatgtttgtgttattatgttcaa----------agccctgaggagagagtcttcatgtgagtgtctgtttttactgcttt i canFam3.chr1 C 0 I 1862 e calJac3.chr4 169835668 35 + 171630274 I a score=3057440.000000 s hg38.chr6_KB021644v2_alt 32300 1313 + 185823 aattttatttcatagtgaactatacttgacataacacacgtatacaattattatatatg-tatattttatcagtattgataaaattaacacccacacagcccatgtcagcatctcaaggttgagaaatgaatcattttcagta-tacaaaacacctctgcataagccatccatgattctatcctcttcattcccaaacagaagtagccattatcctgcttctgggatcataatttccttgcttttctttatggtttattgtacgtgcatccacagaagaatatctggtaagttttacttgtttttgtagtctgtaagtaaaatgatattgtatacatctttagtggtgtctttctatcccatcactgtgccatttatccagatacatgcatgtagataggatttgttcacttttactgttgtatagttttcaaatatataaataaatcacaattttagaacaaacctgccctgttgttgatggacttagggtggatttcagtttctggctgtgctgctgtggactttcttgtatttatcttctgaatgtcatgtatttatcatgtgcctgtcaaaagcttcctggagtgtattcctaggagaattgctagttcttaggatattttcattttctactttgtaagtaatggcaaacattcccaaagtgaaaataatgattcacacccgcaccaacaatgtaagcattcctgtggtttcaccttaaccttcactctgtattggttgatttttt-acttttttctatttggccggaaggtaaaaatatctaattttggttttatttacatttctttgatttctaataagattgagcaattttttgttgttgtttttggacattttgttttgctgtttagcaaaatgtccagtcaggacttctgcccatttttcttttggaatttctcattttGCAGAATTGTTCAAGATTTTATTATGCTCAGGAAGCCACGTTGTATGGAGGAGAGTCAATACTAAGATTTGAGTTGGCTCCAAAGATGGGATTTCCTTTCAGCTTGGCGCAGGGGttttactaacacataatagatggacatatttggggggtacatgtgacaacctaatgcgttcgtataatttgtaaagatcaaatcagtgtacttgggatttctatcaccttaaatatttgtc---ttttTatgatttttaaaaatcaattttattgaggtatactcacac-aaagagtacataatgtatgattctggttttttgaaatgctaggaaaggcaaaactctaagtgaccgaaagcccagcagtgtttgcccacttgtagggattggaagca s panTro4.chr6 170645607 1309 + 172623881 aatttcatttcatagtgaactatacttgacataatacatgtatacaattattatatatg-tatattttatcagtattgataaaattaacacccacacagcccatgtcagcatctcaaggttgagaaatgaatcattttcagta-tacaaaacacctctgcataaaccatccatcattctgtcctcttcattcccaaacagaagtagccattatcctgcttctgggatcataatttccttgcttttctttatggtttattgtacgtgcatccacagaagaatatctggtaagttttacttgtttttgtagtctgtaagtaaaatgacattgtatacatctttagtggtgtctttc----ccatcactgtgccatttatccagatacatgcatgtagataggatttgttcacttttactgttgtatagttttcaaatatataaataaatcacaattttagaacaaacctgccctgttgttg-tggacttagggtggatttcagtttctggctgtgctgctgtggactttcttatatttatcttctgcatgtcatgtatttatcatgtgcctgtcaaaagcttcctggagtgtattcctaggagaattgctagttcttaggatattttcattttctactttgtaagtaatggcaaacattcccaaagtgaaaataatgattcacacccccaccaacaatgtaagcattcctgtggtttcatcttaaccttcactctgtattggttgatttttttacttttttctatttggccggaaggtaaagatatctaattttggttttatttacatttctttgatttctaataagattgagcaattttttgttgttggttttggacattttgttttgctgtttagcaaaatgtccagtcaggacttctgcccatttttcttttggaatttctcattttGCAGAATTGTTCAAGATTTTATTATGCTCAGGAAGCCACGTTGTATGGAGGAGAGTCAATACTAAGATTTGAGTTGGCTCCAAAGATGGGATTTCCTTTCAGCTTGGCGCAGGGGttttactaacacataatagatggacatatttggggggtacatgtgacaacctaatgcgttcgtataatttgtaaagataaaatcagtgtacttgggatttctatcaccttaaatatttgtc---ttttTatgatttttaaaaatcaattttattgaggtatactcacac-aaagagtacataatgtatgattatggttttttgaaatgctaggaaaggcaaaactctaagtgaccaaaagcccagcagtgtttgcccacttgtagggattggaagca i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172397401 1304 + 174210431 aattttatttcatagtgaactatacttgacataatacacgtatacaattattatatatg-tatattttatcagtactgataaaattaacacccacacagcccatgtcaccatctccaggttgagaaatgaatcattttcagta-tacaaaacacctctgcgtaagccatccatgattctatcctcttcattcccaaacagaagtagccattatcctacttctgggatcataatttccttgcttttctttatggtttattgtacgtgcatccacaaaagaatatctcgtaagttttacttgtttttgtagtctgtaagtaaaataatattgtatatatctttggtggtttctttctatcccatcactgtgccatttatccgaatacatgcatgtaggtaggatttgttcacttttactgttgtatagttttcaagtatataaacaaatcacaactttagaatgaacctgccctgttgttgatggacttagggtggatttcagtttctggctgtgccgctgtagactttcttgtctttatcttgtgcatgtcatgtatttatcacgtgcctgtcaaaagcttcttggagtatattcctagaagaattgctagttcttaggatattttcattttaaactttgcaagtaatggcaaacattcccaaagggaaaataatgattcacacccccaccaacaatgtaagcagtcctgtggtttcatcttaaccttcactctgtattggttgatttttt-acttttttctatttggtcggaaggtaaagatatctaattttggttttatttacatttctttgatttctaataagattgagcaatttttt-ttgttgtttctggacattttgttttgctgtttagcaaaatgctcagtcaggacttctgcccatttttcttttggaatttctcattttgcagaattgttcaagattttattatgctcaggaAGCCACGTTGTATGGATGAGAGTCAATACTAAGATTTGAGTTGGCTCCAAAGATGGGATTTCCTTTCAGCTTGGCGCAGGGGttttactcatgc---atagatggacatatttggggggtacatgtgacaacctaatgcgttcctataatttgtaaagatcaaatcagtgtacttgggatttctatcaccttaaatatttgtc------ttacgatttgtaaaaatcaa-tttatTGAGGTATACTCacac-aaagagtacataatgtattattctggttttttgaaatgctaggaaaggcaaaact-gaagtgaccgaaagcccagcagtgtttgcccacttatagggattggaagca i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156255604 1311 + 157873769 aattttatttcatagtgaactatacttgacgtaatacacgtatacaattattatacatg-tatattttatcagtattgataaaattaacacccacgcagcccatgtcaccatctcaaggttgagaaatgaataattttcagta-tacaaaacacccctgcataagccatccatgattctatcctccgcattcccaaacagaagtagccattatcctgcttctgggatcacaatttccttgcttttctttatggtttattgtatgtgcatccacagaagaatatctggtaagttttacttgtttttgtagtctgtaagtaaaataatattgtagacatctttagtggtttc--tctatcccatcactgtgccatttatccaaatacatgcatgtaggtgggatttgttcacttttactgtcgtatagttttcaagtatataaataaatcacaattttagaacaaacctgccctgttgttgatggacttagggtggatttcagtttctggctgtgctgctgtggactttcttgtatttatcttgtgcatgtcatgtatttatcatgtgcctgtcaaaagcttcttggagtgtattcctaggagaattgctagttcttaggatattttcattttctactttgtaagtaacggcaaacgttcccaaagtgaaaataatggttcacacccccaccaataatgtaagcattcctgtgctttcatcttaaccttcactctgtattggttgatttttt-acttttttctatttggtcggaaggtaaaaatatctaattttggatttatttgcatttcttttatttctaataagattgagcaatttttt-ttgttgtttttggacattttgttttgctgtttagcaaaatgtccagtcaggacttctgcccatttttctttcagaatttatctttttgcagaattgttcaagattttattatgctcaggaAGCCACGTTGTATGGATGAGAGTCGATACTAAGATTTGAGCTGGCTCCCAAGACGGGATCTCCTTTCAGCCTGGCGCGGGGGttttactaacacataatagatggacatatttggggggtacatgtgccaacctaatgcgttcctataatttgtaaagatcaaatcggtgtacttgggatttctatcaccttaaatatttgtc--ttttttatgATTTTTAAAAATCAATTTTATTGAGGTATACTCacac-aaagagtacataatgtatgattctggttttttgaaatgctaggaaaggcaaaactctaagtgacagaaagcccagcagtgtttgcccacttgtagggattggaagca i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168077317 1316 + 169853907 aattttatttcatagtgaactatacttgacataatacatgtataaaattattctatgtgttatattttatcagtattgataaaattaacacccaagcagcccatgtcaccatctcaaggttgagaaatgaatcattttcagtactacaaaacacctctgcataaaccatccatgattctatcctcttccttcccaaacagaactagccattatcctacttctgggatcataaattcctttcttttctttatagtttattgtacatgcatccacagaaaaatatctggtaagttttacttgtttttgtagcctgtaagtaaaataatattgtatacatctttagtggtttctttctaacccatcacagtgccatttatccaaatacacgcatgtaagtaggatttgttcacttttactgttgtatattttgc-attatataaacaaatcacaattttagaacaaacctgccctgttgttgatggacttagggtggatttcagtttctggctgtgctgctgtggacattcttgtatttatcttgtgtgtgtcatgtatttatcatgtgtctgtcgaaagctgcttgcagtgtatttccaggagaattgccagttcttagggtattttcattttctactttgtaagtaatggcaaacattcccaaagtgaaaataatgattcacacccccaccaacaatgtaagcattcttgtggtttcatcttaaccttcactctgacttggtcgatttttt-gcttttttctatttggtcagaaggcaaacatatctaattttggttttatttacatttctttgatttctaataagattgagcaattttt--ttgttgtttttggacattttgttttgctgtttagcaaaatgtccagtcaggatttctgcccatttttcttttggaatttctctttttGCAGAATTGTTCAAGATTTTATTATGCTCAGGAAGCCAAGTTGTATGGATGAGAGTCAATTCTAAGATTTGAATTGGCTCCAAAGGTGGGATTTACTTTCAGCTTGGTGCAGGGGttttactaatacataacagatgggcgtatttggggggtacatgtgacaacctaaggcattcctgtaatttgtaaagatcaaatcagtgtacttgggatttctatcgccttaaatatttgtgttttctttAAGATTTTTAAAAATCAATTTTATTGAGGTATACTCGcacaaaagagtacataatgtatgattctggttttttgaaatgctaggaaaggcaaaactctaagtgaccgaaagcccagcagcgttcgcctactggtagggattgaaagca i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169033070 1316 - 170955103 aattttatttcatagtgaactatacttgacataatacatgtataaaattattctatgtgttatattttatcagtattgataaaattaacacccaagcagcccatgtcaccatctcaaggttgagaaatgaatcattttcagtactacaaaacacctctgcataaaccatccatgattctatcctcttccttcccaaacagaactagccattatcctacttctgggatcataaattcctttcttttctttatagtttattgtacatgcatccacagaaaaatatctggtaagttttacttgtttttgtagcctgtaagtaaaataatattgtatacatctttagtggtttctttctaacccatcacggtgccatttatccaaatacacgcatgtaagtaggatttgttcacttttactgttgtatattttgc-attatataaacaaatcacaattttagaacaaacctgccctgttgttgatggacttagggtggatttcagtttctggctgtgctgctgtggacgttcttgtatttatcttgtgtgtgtcatgtatttatcatgtgtctgtcgaaagctgcttgcagtgtatttccaggagaattgccagttcttagggtattttcattttctactttgtaagtaatggcaaacattcccaaagtgaaaataatgattcacacccccaccaacaatgtaagcattcttgtggtttcatcttaaccttcactctgacttggtcgatttttt-gcttttttctatttggtcagaaggcaaacatatctaattttggttttatttacatttctttgatttctaataagattgagcaattttt--ttgttgtttttggacattttgttttgctgtttagcaaaatgtccagtcaggatttctgcccatttttcttttggaatttctctttttGCAGAATTGTTCAAGATTTTATTATGCTCAGGAAGCCAAGTTGTATGGATGAGAGTCAATTCTAAGATTTGAATTGGCTCCAAAGGTGGGATTTACTTTCAGCTTGGTGCAGGGGttttactaatacataacagatgggcgtatttggggggtacatgtgacaacctaaggcattcctgtaatttgtaaagatcaaatcagtgtacttgggatttctatcgccttaaatatttgtgttttctttAAGATTTTTAAAAATCAATTTTATTGAGGTATACTCGcacaaaagagtacataatgtatgattctggttttttgaaatgctaggaaaggcaaaactctaagtgaccgaaagcccagcagcgttcgcctactggtagggattgaaagca i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163851204 1312 + 165299245 aattttatttcatagtgAACTATACTTGACATAATACATGTATAAACTTATTCTATGTGTTATATTTTATCAGTATTGATAAAATTAACACCCACGCAGCCCATGTCACCATCTCAAGGTTGAGAAATGAATCATTTTCAGTACTACAAAACACCTCTGCATAAACCATCCATGATTCTATCCTCTTCCTTCCCAAACAGAAGTAGCCATTATCCTACTTCTGGGatcataatttcctttcttttctttatagtttattGTACATGCATCCACAGAAAAATATCTGGTAagttttacttgtttttgtagcctgtaagtaaaataatattgtatACATCTTTAGTGGTTTCTTTCTATCCCATCACGGTGCCATTTATCCAAATACATGCATGTAAGTAGGATTTGTTCACTTTTACTGCTGTATATTTTGC-ATTATATAAACAAATCACAATTTTAGAACAAACCTGCCCTGTTGTTGATGGACTTAGGGTGGATTTCCGTTTCTGGCTGTGCCGCTGTGGACGTTCTTGTATTTATCTTGTGTGTGTCATGTATTTATCATGTGCCTGTCGAAAGCTGCTTGCAGTGTATTTCCAGGAGAATTGCCAGTTCTTagggtattttcattttctactttgtaaGTAATGGCAAACATTCCCAAAGTGAAAATAATGATTCACACCCCCACCAACAATGTAAGCATTCTTGTGGTTTCATCTTAACCT----TCTGTCTTGGTcgatttttt-gcttttttctatttgGTCGGAAGGCAAACATAtctaattttggttttatttacatttctctgatttctAATAAGATTgagcaattttt--ttgttgtttttggacattttgttttgctgtttagCAAAATGTCCAGTCAGGATttctgcccatttttcttttggaatttctCTTTTTGCAGAATTGTTCAAGATTTTATTATGCTCAGGAAGCCAAGTTGTATGGATGAGAGTCAATTCTAAGATTTGAGTTGGCTCCAAAGATGGGATTTACTTTCAGCTTGGTGCAGGGGTTTTACTAATACATAACAGATGGGCGTATTTGGGGGGTACATGTGACAACCTAAGGCATTCCtgtaatttgtaaagatcaaatcagtttACTTGGGATTTCTATCgccttaaatatttgtgttttctttaagatttttaaaaatcaattttattgaggtatactcacacaaaagagtacataatGTATGATTCTGGTTTTTTGAAATGCTAGGAAAGGCAAAACTCTAAGTGACCGAAAGCCCAGCAGCGTTCGCCTACTGGTAGGGATTGAAAGCA i papAnu2.chr4 C 0 I 235 s chlSab2.chr13 96629210 1290 + 98384682 aattttatttcatagtgaactatactagacataatacatgtataaaattattctatgtg-tatgttttatcagtattgataaaattaacacccacgcagcccatgtcaccatctcaaggttgagaaatgaatcattttcagtactacaaaacacctctgcataaaccatccatgattctatcctcttccttcccaaacagacgtagccattatcctacttctgggatcataatttcctttcttttctttatagtttattgtacatgcatccacagaaaaatatctggtaagttttacttgtttttgtagcctgtaagtaaaataatattgtatacatctttagtggtttctttctaacccatcacagtgccatttatccaaatacatgcatgtaagtgggatttgttcacttttactgttgtatattttgc-attatataaacaaatcacaattttagaacaaacctgccctgttgttgatggacttagggtggatttcagtttctggctgtgccgctgtggacgttct----------------------tgtatttatcatgtgcctgtcgaaagctgcttgcagtgtattcccaggagaattgccagttcttagggtattttcattttctactttgtaagtaatggcaaacattcccaaagtgaaaataatgattcacacccccaccaacaatgtaagcattcttgtggtttcatcttaaccttcactctgtattggtcgatttttt-gcttttttctatttggtcggaaggcaaacatatctaattttggttttatttacatttctttgatttctaataagattgagcaatttct--ttgttgtttttggacattttgttttgctgtttagcaaaatgtccagtcaggatttctgcccatttttcttttggaatttctctttttGCAGAATTGTTCAAGATTTTATTATGCTCAGGAAGCCAAGTTGTATGGATGAGAGTCAATACTAAGATTTGAGTTGGCTCCAAAGATGGGATTTACTTTCAGCTTGGTGCAGGGGttttactaatacataacagacgggcatattt--ggggtacatgtgacaacctaaggcattcctgtaatttgtaaagatcaaatcagtgtacttgggatttctatcaccttaaatatttgtcttttctttAAGATTTTTAAAAACCAATTTTATTGAGGTATACTCacacaaaagagtacataatgtatgattctggttttttgaaatgctaggaaaggcaaaactctaagtgactgaaag-ccagcagcgttcacctaccggtagggattggaagca i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169835668 35 + 171630274 I e canFam3.chr1 56141435 1862 + 122678785 I a score=4764581.000000 s hg38.chr6_KB021644v2_alt 33613 2119 + 185823 ttggctgccaaggggcatgaaggaactttcagggatcataaaatatcctgtgttgtggacgtggttgtggttgcatatttttatttctttt-gggtagatagctt-ggataaaattactgggtctactgggtaacttcataaactttttaagaaactcaactattttccaaaatggctaggccattgcacactccagtcaacactgtgtgagggttcccactttcaccaacatttgccatcgtctgccttagtgttacagctagtttcatgagtgggaagtggcatgcagtgttgttttaattaacatttccttaatcataaatgatat---acatctttccatgtatatattcttctctgacttcccttgataaaatgtctattatatctttgtacatttttt-aaaaagattgtctatcttaattggtttgtaag--ttctttgtatattatgaatacaattctttgtaagaaataagatttgcaagtattttttgtaaatttatggcttgacattttattctttttatggtgtcttttgaagcacaaaaattttagattttgataaagttcaat---ttttttt-attttatggattttgcatttggtgttatatctaagaatatttgcataaccatttcaaaattttcttctg-tttttttaaatagc----tttttatagctttagctcttaaatttagac-aatgatccatcccgagatactttttatgtgtaatgtaagacacggtctgaattcaatttgtttgaacattaataaatagaaattatttaaaaagaaccaaatagaaattctggagtgagttgagaagtgcgataggtgaaataaaacatcgctagaggatcttaacaacagattcgagtcagta---gaagaaaaaaccggagaacttgcaggtaagtcaacacatagtatctcattttaggagcagaaagaaaaaaa-gaatggagaaaaattaatagaaagtcaacttgtttgcctacagatatccaattgtcccatacgatttattgcaaagtatagcacttcataattgaattttcctggcatctttgtggaaaaacaatcgactgtaagccttagtgtttatctgtttatctgtgggatttttcaattatactccattgatctatatgtatacatctatctcaatatcacaatcttttgatttagtggagcttccgaata-agttttaaaaatgggaagtgaaattcctcca--tttgtttttcaga-tgttttgactatgttgggtctacgcattttcatgtaaa-tgttaggaacagcttgtcagttgccacaaaaagcttgctggaatttttacaggtgttgaattgaatatatgtatcaatttcacatgaattttcatctttaaaatattgacttttccaactcatacacatggattgtttctctatttaatatgatcatcattcattgctttcagcatattctacagcaagctcgtccaacccacggcctgaaagtcacatgcggcccaggacagcattgaatgcagcccaatgcaaatttgcaaactgtcttaaaacatag-attttttttttttgcg---------atttttttttt-------ttaaagctcatcagctattggtagtgttagtgtattttatgtgtagcccaagacaattctttttccagtgtggcacagggaagtcaaaatattagacacccttgttctataggtttcaatgtaaacatcttaccttctttcgaaagtttatttctaagtattttatcctttttaatgtgaatggaatagttttctgaatttcatttttggaccat----------------------------tcattgatagtatgtagaagtgaaattgTCATTGTTATCGCCATCttctt-------ttttatattatt--ttattatttttttgagatggactttctctcttgtcacccaggctggagtgcaatggctcgatctctggtcaccacaacc-ctgcctgcctggttcaagtgattctccagcctcagcctcccaagtagttgggattacaggtgcgcgccatcacgcccagctaatttttgtatttttagtagagacagggtttcactatgttggccagactggtctgaaactccagacctcaagtgatccacccaccatggcctcccaaagtgct s panTro4.chr6 170646916 2121 + 172623881 ttggctgccaaggggcatgaaggaactttcagggatcataaaacatcctgtgttgtggacgtggttgtggttgcatatttttatttctttt-gggtagatagctt-ggataaaattactgggtctactgggtaacttcataaactttttaagaaactcaactattttccaaaatggctaggccattgcacactccagtcaacactgtgtgagggttcccgctttcaccaacatttgccatcgtctgccttagtgttacagccagtttcatgagtgggaagtggcatgcagtgttgttttaattaacatttccttaatcataaatgatatcgaacatctttccatgtatatattcttctctgacttcccttgataaaatgtctattatatctttgtacattttta-aaaaagattgtctatcttaattggtttgtaagagttctttgtatattatgaatacaattctttgtaagaaataagatttgcaagtattttttgtaaatttatggcttgacattttattctttttatggtgtcttttgaagcacaaaaattttagattttgataaagttcaat---ttttttttattttatggattttgcatttggtgttatatctaagaatatttgcctagccatttcaaaattttcttctg-ttttttaaaatagc----tttttatagctttagctcttaaatttagaccaatgatccatcctgagatactttttatgtgtaatgtaagacatggtctgaattcaatttgtttgaacattaataaatagaaattatttaaaaagaaccaaatagaaattctggagtgagttgagaagtgcgataggtgaaataaagcatctctagaggatcttaacaacagatttgagtcagta---gaagaaaaaactggagaacttgcaggtaagtcaacacatagtatctcattttaggagcagaaagaaaaaaa-gaatggagaaaaattaatagaAAGTCAacttgtttgcctacagatatccaattgttctataccatttattacaaagtatagcacttcataattgaattttcctggcatctttgtggaaaaacaatcaactgtaagccttagtgtttatctgt--------gggatttt-cagttatactccattgatctatatgtatacatttatctcaatatcacaatcttttgatttagtggagctaacgaata-agttttaaaaatgggaagtgaaattcctcca--tttgtttttcaga-tgttttgactatgttgggtctatgcattttcatgtaaa-ttttaggaacagtttgtcaattgccacaaaaagcttgctggaatttttacaggtgttgaattgaatatatgtatcaatttcacatgaattttcatctttaaaatattgacttttccaactcatacacatggattgtttctctatttaatatgatcatcattcattgctttcagcatattctacagcaagcttgttcaacccacggcctgaaagtcacatgcggcccaggacagctttgaatgcagcccaatgcaaatttgcaaactgtcttaaaacataggagattttttttttccg---------atttttttttt----------aagctcatcagctgttgttagtgttagtgtattttatgtgtagcccaagacaattctttttccagtgtggcacagggaagtcaaaatattagacacccttgttctataggtttcagtgtaaacatcttaccttcttttgaaagtttatttctaagtattttatcctttttaatgtgaatggaatcgttttctgaatttcatttttggaccat----------------------------tcattgatagtatgtagaagtgaaattgtcattgttatcaccatcttcttcTtctt-ttttttattatt--tttttacttttttgagatggactttctctcttgtcacacaggctggagtgcaatggctccatctttggtcaccacaccc-ctgcctgcctggttcaagtgattctccagcctcagcctcccaagtagttgggattacaggtgcccgccatcacgcccagctaatttttgtatttttagtagagacggggtttcagtatgttggccagactggtctgaaactccagacctcaagtgatccgcccaccatggcctcccaaagtgct i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172398705 2109 + 174210431 ctggctgccaaggggcatgaaggaactttcagtgatcataaaatatcctgttttgtgcacgtggttgtggttgcatatttttatttttggg-gggtagatagcttgggataaaattactgggtctactgggtaacttcataaactttttaagaaactcaactattttccaaaatggctaggccataccacactccagtcaacactgcatgagcgttcccactttcaccagcatttgccatcgtctgccttagtgttacagccagtctcatgagtgggaagtggcatgcagtgttgttttaattaacatttccttaatcataaatgatgttgaacatctttccatgtatatgttcttctctgacttcccttgataaaatgtcaattatatgtttgtacatttttt-aaaaa-attgtctatcttaattggtttgtaagagttctttgtatattatggatacaattctttgtaagaaataagatttgcaagtattctttgtaaatttatggcttgactttttattctttttatggtgtcttttgaagcacaaaagttttagattttgataaagttcaatgtattttttt-attttatggattttgcatttggtgttgtatctaagaatatttgcataaccatttcaaaattttcttctg-tttttttaaatagctttttttttttagctttagctcctaaatttagaccaatgatccatcctgagatactttttatgtataatgtaagacatggtctgaattcaatttgtttgaacattaataaatagaaattatttaaaaagaaccatatagaaattctggagtgagttgagaagtgcgataggtgaaataaaacatctctagaggatcttaacaacagatttgagttagta---gaagaaaaaaccggagaacttgcaggtaagtcaacacatagtatctcattttaggagcagaaatcaaaaaa-gaatggagaaaaattaatagaAAGTCAACTTGtttgcctacagatatccaattgccccataccatgtattgcaaagtatagcacttcataattgaattttcctggcatctttgtggagaagcaatcggctgtaagccttagtgttta-ctgt--------gggacttt-caattatactccattgatctatatgtatatatttatctcagtatcacaatcttttgatttagtggagcttctgagta-agttttaaaaatgggaagtaaaattcctcct--tttgtttttcaga-tgttttgactatgttgggtcttcgcattttcatgtaaa-ttttaggaacagcttgtcaattgccacaaaaagcttgctggaatttttacaggtgttgaattgaatgtatgtaccaatttcacatgaattttcatctttaaaatattgacttttccaactcatacacatggattgtttctctatttaatatgatcatcattcatttctttcagcatattctacagcaagcttgtccaacccacggcctgaaagtcacacatggcccaggacagctttgaatgcagcccaatgcaaatatgcaaactgtcttaaaacataggagatttttttttttc--------------------------------agctcatcagctattgttagtgttagtgtattttatgtgtggcccaagacaattcttcttccagtgtggcacagggaagtcaaaatattagacacccttgttctatagatttcaatgtaaacatcttaccttctttcaaaagtttatttctaagtattttatccttcttaatgtgaatggaatagctttctgaatttcatttttggaccat----------------------------tcgttgatagtatgtagaagtgaaattgTCATTGTTATCACCATCTTCTT---Ctt-ctttttattatttatttttatttttttgagatagactttctctctcgccacacaggctggagtgcaatggctcgatctctggtcaccgcaccc-ctgcctccctgcttcaagtgattctccagcctcagcctcccaagtagttgggattacaggtgcccaccatcacgcccagctaatttttgtatttttagtagagacagggtttcactatg-tggccagactggtctgaaact-cagaacttcagtgatccgccc-tcatggcctcccaaagtgct i ponAbe2.chr6 C 0 M 442 s nomLeu3.chr3 156256915 2117 + 157873769 ttggctgccaaggggcacgaaggaactttcagggatcataaaatatcctgtgttgtggacgtggttgtggttgcatatttttatttctttt-gggtagatagcttgggataaaattactgggtctactgggtaacttcataaactttttaagaaactcaactattttcc-aaatggctaggccataccgcactctagtcaacaatgcgtgagggttctcactttcaccaacatttgccatcgtctgccttagtgttacagccagtctcatgagtgggaaggggcttgcagtgttgttttaatcaacatctccttaatcataaattatgttgaacatctttccacgtatatgttcttctctgacttcccttgataaaatgtcaattatatctttgtacatttttt-aaaaagattgtctatcttaattggtttgtaagagttctttgtgtattatgaaaacaattctttgtaagaaataagatttgcaggtattttttgtaaatgtatggcttgactttttgttctttttatggtgtcttttgaagcacaaaagttttagatttt-ataaagttcaatgtattttttttattttatgaattttgcatttggtgttgtatctaagaatatttgcataaccatttcaaaattttcttcttctttttttaaatagc----tttttatagctttagctcttaaatttagaccaatgatccatcccaagatactttttatgtataatgtaagacatggtctgaattcaatttgtttgaacattaataaatagaaactatttaaaaagaaccgaatagaaactctggagtgagctgagaagtgcaatagacgaaataaaacatctctagaggatcttatcaacagatttgagtcagta---gaagaaaaaaccggagaacttgcaggtaagtcaacacatagtatctcattttaggagcagaaagaaaaaaaggaatggagaaaaattaacagaAAGTCAACTTGtttgcctatagatatccaatttccccataccatttattgcaaagtatagcacttcataattgaattttcctggcatctttgtggaatagcaatcggctgtaagccttagtgttta-ctgt--------gggacttt-caattatactccattgatctatatgtatatatttatctcagtatcagaatcttttgatttagtggagcttccgagta-agttttaaaaatgggaagtaaaattcctcca--cttgtttttcaga-tgttttgactatgttgggtcttcgcattttcatgtaaa-ttttaggaacagcttgtcaattgccacaaaaaacttgctggaatttttacaggtgttgaattgaatgtatgtaccaatttcacatgaattttcgtctttaaaatattgacttttccaactcatacacatggattgtttctctatttaatatgatcatcattcatttctttcagcatattctatagcaagcttgtccaacccatgtcctgaaagtcac------------acaactttgaatgcagcccaatgcaaatttgcaaactgtcttaaaacatgagatttttttgtttgttt---------tttgtttgtttgtttgttttttagctcatcagctattgttagtgttagtgtattttatgtgtggcccaagacaattcttcttccagtgtggcacagggaagtcaaaatattagacacccttgttctataggtttcaatgtgaacatcttatctcgttttgaaagtttatttctaagtattttatcctttttaatgtgaatggaatcgttttctgaatttcatttttggaccat----------------------------tcattgatagtatgtagtagtgaaattgTCATTGTTATCACCATCTTCtt---cttctttttttttatt--ttttta-tttcttgagatgg--tgtttctctcatcacacaggctggagtgcaatggcttgatctccggtcactgcaccctccacctcccaggttcaactgattctccagcctcagcctcccaagtagtttggattacaggcgcctaccaccacacccagctaatttttgta-ttttggtagagacagggtttcaccatgttggccagactggtctcaaactcctgacctcaggtgatccgcccaccttggcctcccaaagtgct i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168078633 2121 + 169853907 ttggctgccagggggcatgaaggaactttcagggctcataaaatatcatgtgttgtggacgcggttgtggttgcatatttttatttcttttggggtatatagcttgggataaaattactgggtctactgggtaacttcataaactttttaagaaactcaactattttccataatggctaggccattgcacactccggccaacactgtgtaagggttcccactttcaccaacatttgccattgtctgcctcagtgttacagccagtctcatgagcgggaagtggcatgcagtgctgttttaattaacatttccttcatcataaatgatgttgaacatctttccatgtatatattcttctctgacttcccttgataaaaagtctattatatctttgtacatttttttaaaaagattgtccatcttaattggtttgtaagagttctttgtatattatgaataaaattctttgtaagaaataagatttgcaaatatttttcgtgaatttatggcttgactttttatcctttttatggtgtcttttgaagcacagaagttttagattttgataaagttcaatttttttcttt-attttatggattttgcatttggtgttgtatctaagaatatttgcctaaccatttcaaaattttcttctg-ttttttaaaatagc----tttttatgcctttagctcttaaatttagaccaatggtccatcccgagatactttttgtgtgtgatgtaagacacggtctgaattcaatttgtttgaactttaataaatagaaactatttaaaaagaaccaaatagaaattctggggtgagttgaaaagtgcaataggtgaaatgaaacatctctagagggtcttaacaacagatttgagtcagtcaaaaaaaaaaaaactggagaacttgcaggtaagtcaacacatagtatctcattttaggagcagaaagaaaaaaa-gaatggagaaaaattaacagaaactcaacttgtttgcctacagatatccaattgccccataccatttattgcaaagtatagcacttcgtaattgaattttcctggcatctttgtggataaacaattgactgtaagccttagggtttatctgt--------gggacttt-caattatactgcattgatctatatgtgtttgtttatctcagtatcacaatcttttgatttagtggagcttccgaggagggttttaaaactgggaagtgaaattcctccaattttttttttaagattgttttgactatattgggtctttgcattttcatgtaaa-ttttaggaacagcttgtcaattgccacaaaaagcttgctggaatttttacaggtgttgaattgaatgtatgtatcaatttcacatgaattttcatctttaaaatgttgacttttccaaagcatacacgtggattgtttctctatttagtatgatcaccattcatttctttcagcacattctacagcaagcttgtccag-ccatggcctgaaagtcacatgcggcccaggacagctttgaatgcagcccaatgcaaatttgtgaactgtcttacaacataagagatttttcttggcga-----------ttttttttt-------tcttagctcatcagctcttgttagtgttaatgtattttatgtgtggcccaagacaattcttattccaatgtggcacagagaagtcaaaatattagacacccttgttctataggtttcaatgtaaacatcttaccttcttttgaaagtttatttctaagtattttatcctttttaatgtgaacggaatacttttctgaatttcatttttggactat----------------------------tcattgatagtatgtagaagtgaaattgtcattgttatcaccatcttctt---ctt-ctt-----------catttatttttttgagatggagtttctc-cttgtcacccaggctggagtgcaatggctcgatctccgggcaccacaccctctgcctcccaggttcaagtgattctccagcctcagcctcccaagtagttgggattgcaggtgcctgccaccatgcccggctaatttttgtatttgtagtagagacggggtttcaccatgttggccaagctggtcttgaactccctacctcaggtgatccgcccaccttggcctcccaaagtgct i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169034386 2121 - 170955103 ttggctgccagggggcatgaaggaactttcagggctcataaaatatcatgtgttgtggacgcggttgtggttgcatatttttatttcttttggggtatatagcttgggataaaattactgggtctactgggtaacttcataaactttttaagaaactcaactattttccataatggctaggccattgcacactccggtcaacactgtgtaagggttcccactttcaccaacatttgccattgtctgcctcagtgttacagccagtctcatgagcgggaagtggcatgcagtgctgttttaattaacatttccttcatcataaatgatgttgaacatctttccatgtatatattcttctctgacttcccttgataaaaagtctattatatctttgtacatttttttaaaaagattgtccatcttaattggtttgtaagagttctttgtatattatgaataaaattctttgtaagaaataagatttgcaaatattttttgtgaatttatggcttgactttttatcctttttatggtgtcttttgaagcacagaagttttagattttgataaagttcaatttttttcttt-attttatggattttgcatttggtgttgtatctaagaatatttgcctaaccatttcaaaattttcttctg-ttttttaaaatagc----tttttatgcctttagctcttaaatttagaccaatggtccatcctgagatactttttgtgtgtgatgtaagacacggtctgaattcaatttgtttgAACTTTaataaatagaaactatttaaaaagaaccaaatagaaattctggggtgagttgaaaagtgcaataggtgaaatgaaacatctctagagggtcttaacaacagatttgagtcagtcaaaaaaaaaaaaactggagaacttgcaggtaagtcaacacatagtatctcattttaggagcagaaagaaaaaaa-gaatggagaaaaattaacagaaactcaacttgtttgcctacagatatccaattgccccataccatttattgcaaagtatagcacttcgtaattgaattttcctggcatctttgtggataaacaattgactgtaagccttagtgtttatctgt--------gggacttt-caattatactgcattgatctatatgtgtttgtttatctcagtatcacaatcttttgatttagtggagcttccgaggagggttttaaaactgggaagtgaaattcctccaattttttttttaagattgttttgactatattgggtctttgcattttcatgtaaa-ttttaggaacagcttgtcaattgccacaaaaagcttgctggaatttttacaggtgttgaattgaatgtatgtatcaatttcacatgaattttcatctttaaaatgttgacttttccaaagcatacacgtggattgtttctctatttagtatgatcaccattcatttctttcagcacattctacagcaagcttgtccag-ccatggcctgaaagtcacatgcggcccaggacagctttgaatgcagcccaatgcaaatttgtgaactgtcttacaacataagagatttttcttggcga-----------ttttttttt-------tcttagctcatcagctcttgttagtgttaatgtattttatgtgtggcccaagacaattcttattccaatgtggcacagagaagtcaaaatattagacacccttgttctataggtttcaatgtaaacatcttaccttcttttgaaagtttatttctaagtattttatcctttttaatgtgaacggaatacttttctgaatttcatttttggactat----------------------------tcattgatagtatgtagaagtgaaattgTCATTGTTATCACCATCttctt---ctt-ctt-----------catttatttttttgagatggagtttctc-cttgtcacccaggctggagtgcaatggctcgatctccggtcaccacaccctctgcctcccaggttccagtgattctccagcctcagcctcccaagtagttgggattgcaggtgcctgccaccatgcccggctaatttttgtatttgtagtagagacggggtttcaccatgttggccaagctggtcttgaactccctacctcaggtgatccgcccaccttggcctcccaaagtgct i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163852751 2144 + 165299245 TTGGCTGCCAGGGGGCATGAAGGAACTTTCAGGGCTCATAAAATATCATGTGTTGTGGACGCGGTTGTggttgcatatttttatttctttt-gggtatatagctTGGGATAAAATTACTGGGTCTACTGGGTAACTTCataaactttttaagaaactcaactattttccataatggctaggCCATTGCACACTCCGGTCAACACTGCATAAGGGTTCCCACTTTCACCAACATTTGCCATTGTCTGCCTCAGTGTTACAGCCAGTCTCATGAGCGGGAAGTGGCATGCAGTGCTGTTTTAATTAACATTTCCTTCATCataaatgatgttgaacatctttccacGTATATATTCTTCTCTGACTTCCCTTGATAAAAAGTCTATTATatctttgtacatttttttaaaaagattgtccATCTTAATTGgtttgtaagagttctttgtatattatgAATACAATTCTTTGTAAGAAATaagatttgcaagtattttttgcGAATTTATGGCTTgactttttatcctttttatggtGTCTTCTGAAGCACAGAAGTTTTagattttgataaagttcaatttttttcttt-attttatggattttgcatttggtgttgtatctaagaatATTTGCCTAACcatttcaacattttcttctg-ttttttaaaatagc----tttttatgCCTTTAGCTCTTAAATT-----AAATGGTCCATCCCGAGatactttttgtgtgtgatgtAAGACACGGTCTGAATTCAATTTGTTTGAACTTTAATAAAtagaaactatttaaaaagaaccaaatagaaattctggggTGAGTTGAAAAGTGCAATAGGTGAAATGAAACATCTGTAGAGGGTCTTAACAACAGATTTGAGTCAGtc----aaaaaaaaactggagaactTGCAGGTGAGTCAACACATAGTATCCCATTTTAGGAgcggaaagaaaaaaa-gaatggagaaaaattaacagaaactCAACTTGTTTGCCTACAGATATCCAATTGCCCCATACCATTTATTGCAAAGCATAGCACTTCATAATTGAATTTTCCTGGCATCTTTGTGGATAAACAATTGACTGTAAGCCTTAGTGTTTATCTGT--------GGGACTTT-CAATTATACTGCATTGAtttatatgtgtttgtttatCTCAGTATCACAATCTTTTGATTTAGTGGAGCTTCcgagta-agttttaaaaatgggaagtgaaattcccccaattttttttttaagattgttttgactatatCGGGTCTTtgcattttcatgtaaa-ttttaggaacAGCTTGTCAATTGCCACAAAAAGCTTGCTGGAATTTTTACAGGTGTTGAATTGAATGTCTGTATCAATTTCACAtgaattttcatctttaaaatattgacttttcCAAAGCATACACGTGGGTTGTTTCTCTATTTAGTATGATCACCATTCatttctttcagcacattctaCAGCAAGCTTGTCCAG-CCACGGCCTGAAAGTCACATgcggcccaggacagctttgaatgcagcccaatgCAAATTTGTGAACTGTCTTACAACATAGGAGATTTTTCttggcga-----ttttttttttttttt-------ttttagctcatcagctgttgttagtattaatgtattttatgtgtggcccaagacaattcttattCCAATGTGGCACAGAGAAGTCAAAATGTTAGACACCCTTGTTCTATAGGTTTCAATGTAAACATCTTACCTTcttttgaaagtttatttctaagtattttatcctttttaatgtGAACGGAATACttttctgaaattcatttttGGACTATTCATTGATAGTATGTAGAAGTGAAATTGTCATTGATAGTATGTAGAAGTGAAATTGTCATTGTTATcaccatcttctt---ctt-ctt-----------tttttatttttttgagatggagttcctc-cttgtcacccaggctggagtacaatggctcgaTCTCTGGTCAccacaccctctgcctcccaggttcaagtgattctccagcctcagcctcccaagtagttgggattgcaggtgcctgccaccacgcccggctaatttttgtatttgtagtagagacggggtttcaccatgttggccaggctggtcttgaactccctacctcaggtgatccgcccaccttggcctcccaaagtgcc i papAnu2.chr4 I 235 C 0 s chlSab2.chr13 96630500 2113 + 98384682 ttggctgccaaggggcatgaaggaactttcagggctcataaaatatcatgtgttgtggacgcggttgtggttgcatatttttatttctttt-gggtatatagcttgggataaaattactgggtctactgggtaactttataaactttttaagaaactcaactattttccataatggctaggccattgcacactccagtcaacactgtgtgagggttcccactttcaccaacatttgccattgtctgccttagtgttacaaccagtctcatgagcgggaagtggcatgcagtgttgttttaattaacatttctttaatcacaaatgatgttgaacatctttccatgtatatattcttctctgacttcccttgataaaaagtctattatatctttgtacattttttaaaaaagattgtctatcttaattgatttgtaagagttctttgtatattatgaatacaattctttgtaagaaataagatttgcaagtattttttgcaaatttatggcttgactttttatccttttt-tggtgtcttttgaagcacagaag---------ttgataaagttcaaatttttt-ttt-attttatggattttgcatttggtgttgtatctaagaatatttgcctaaccatttcaaaattttcttctg-tttttttaaatagc----tttttatgcctttagctcttcaatttagaccaatggtccatcccgagatactttttgtgtgtgatgtaagacatggtctgaattcaatttgtttgaactttaataaatagaaactatttaaaaagaaccaaatagaaattctggggtgagttgaaaagtacaataggtgaaatgaaacatctctagagggtcttaacaacagatttgagtcagtc----aaaaaaaaactggagaacttgcaggtaagtcaacacacagtatctcattttaggagcagaaagaaaaaaa-gaacggagaaaatttaacagaaactcaacttgtttgcctacagatatccaattgccccataccatttattgcaacgtatagcacttcgtaattgaatttttctggcatctttgtggataaacaattgactgtaagccttagtgtttatctgt--------gggatttt-caattatactccattgatctatatgtgtttgtttatctcagtatcacaatc--ttgatttagtggagcttctgagta-agttttaaaaatgggaagtgaaattcctccaa-tttttttttaagattgttttgactatattgggtctttacattttcatgtaaatttttaggaacagcttgtcaattgccacaaaaagtttgctggaatttttataggtgttgaattgaatgtatgtatcaatttcacaggaattttcatctttaaaatattgacttttccaacgcatacacgtggattgtttctctatttagtatgatcaccattcatttctttaagcatattccacagcaaacttgtccag-ccacggcctgaaagtcacatgcggcccaggacagctttcaatgcagcccagtgcaaatctgtgaactgtcttacaacataggagatttttcttggccttttttttttttttttttttt-------ttttagctcatcagctgttgttagtgttaatgtattctatgtgtggcccaagacaattcttcttccaatgtggcacagggaagtcaaaatattagacacccttgttctataggtttcaatgtaaacatcttaccttcttttgaaagtttatttctaagtattttatcctttttaatgtgaatggaatacttttctgaatttcatttttggactat----------------------------tcattgatagtatgtagaagtgaaattgTCATTGTTATCACCATCttctt---cct-ctt-----------ttttaatttttttgagatggagtttctc-cttgtcacccaggctggagtgcaatggctcgatctctggtcaccacacactctgcctcccaggttcaagtgattctccagcctcagcctcccaagtagttgggatcgcaggtgcctgccaccacacccagctaatttttgtatttgtagtagagacggggtttcaccatgttggccaggctggtcttgaactccctacctcaggtgatccacccaccttggcctcctaacgtgct i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169835668 35 + 171630274 I e canFam3.chr1 56141435 1862 + 122678785 I a score=39162.000000 s hg38.chr6_KB021644v2_alt 35732 30 + 185823 ggga-----ttaccggcgtgagccaccgcgcccA-T s panTro4.chr6 170649037 30 + 172623881 ggga-----ttaccgacgtgagccaccgcgccca-c i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156259032 31 + 157873769 ggga-----ttacaggcatgagccaccacgaccagc i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168080754 36 + 169853907 gggagtaagttacaggcatgagacaccgctcccagc i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169036507 36 - 170955103 gggagtaagttacaggcatgagacaccgctcccagc i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163854895 36 + 165299245 gggagtaagttacaggcatgagacaccgctcCCAGC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96632613 36 + 98384682 gggagtagattccaggcgtgagacaccactcccagc i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169835668 35 + 171630274 I e canFam3.chr1 56141435 1862 + 122678785 I e ponAbe2.chr6 172400814 442 + 174210431 M a score=1178751.000000 s hg38.chr6_KB021644v2_alt 35762 560 + 185823 CACCGTCTTCTTCTTGATTGGCCTTGTATGTAAAT-GAAAGCCtgggtatcctc---ctgctcctgattttagggggaa--cattctgcttttctccgttaagcatgctgttaaccgtgggtttttcacagatacgttttatcacattggggaagttgtct-cctattactagtttgttgagaatttattccctgagtggatgttgaattttgtcaaatgcttttttt----tt-gtcattcattgagataatcatgtatttttgtcctttattaaaatgctgtattacattacttgatatttggatgttgtaccaaccttgcagtcctgatttaaatcctactaagttatgatatatcatatttttatatgttgccaagttcagttttctagtattttgttgagaattttttgcatatgggttcacaggaaacattggtctatggttttcttttttcatgatatttttctctggctttgatatcagaataatactggctttatagaatgagttgggaagtattcttttctcttctacattctaaaataattttgtgaagaattagtattag s panTro4.chr6 170649067 560 + 172623881 caccaacttcttcttgattggccttgtatgtaaat-gaaagcctgggtatcctc---ctgctcctgattttagggggaa--cattctgcttttctccgttaagcatgctgttaaccatgggtttttcacagatacgttttatcatattggggaagttgtct-cctattactagtttgttgagaatttattccgtgagtggatgttgaattttgtcaaatgcttttttt----tt-gtcattcattgagataatcatgtgtttttgtcctttattaaaatgctgtattacattacttgatatttggatgttgcaccaaccttgcagtcctgatttaaatcctactaagttatgatataccatatttttatatgttgccaagttcagttttctagtattttgttgagaattttttgcatctgggttcacaggaaacattggtctatggttttcatttttcatgatatttttctctggttttgatatcagaataatactggctttatagaataagttgggaagtattcttttctcttctacattctaaaataattttgtgaagaattagtattac i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156259063 560 + 157873769 cACCATCTTCTTCTTGATTGGCCttgaatataaatggaaagcctgggtatcctt------ctcctgattttagggggaa-ccattctgcttttctctgttaagtacgctgttaactgtgggtttttcacagatgcgttttatcacattggggaagttgtct-cctattactagtttgttgagaatttattccatgagtggatgttgaatttcgtcaaatgcttttttt----ttggtcattcattgagataatcatgtatttttgtcctttattaaaatgctgcattatattacttgatatttggatgttgcaccaaccttgcagtcctaatctaaatcctactaagtgatgatatatcatatttttatatgttgccgaattcagttttctagtattttgttgagaattttttgcacctgggttcacaagaaacattggtctatggttttcttttttcatgatatttttctctggttttgatatcagaataatactggctttatagaatgagttgggaagtattcttttctcttctacgttctaaaagagttttgtgaagaattagtattac i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168080790 541 + 169853907 caccatcttcttctggattggccttgtatataaatggaaagcctgggtatccttctcctgttcctgattttaggggggaatcattctgcttttctctgttaagtatgctgttaaccgtgggtttttcacagatacattttatcacattggggaagttgtct-cctattactagcttgttgagaatttattccatgagtggatgttgaattttgtcaaatgcttttctt---ttt-ttcattcattgagataatcatgtatttttgtccttcattaaaatgctgtattacattacttgacattcggatgttgcagcaaccttgcagtcctaatctaaatcctgctaagttatgatatatcgtatttttatatgttgccgagttcagttttctagtattttgttgataattttttgcatctggg--------------------------ttcttttttcatgacttttttttctggttttggtatcagaataatactggctttatagaatgagttgggaagtattcttttctcttctatgttctaaaataattttgtgaagaattagtattac i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169036543 541 - 170955103 cACCATCTTCTTCTGGATTGGCCttgtatataaatggaaagccggggtatccttctcctgttcctgattttaggggggaatcattctgcttttctctgttaagtatgctgttaaccgtgggtttttcacagatacattttatcacattggggaagttgtct-cctattactagcttgttgagaatttattccatgagtggatgttgaattttgtcaaatgcttttctt---ttt-ttcattcattgagataatcatgtatttttgtccttcattaaaatgctgtattacattacttgacatttggatgttgcagcaaccttgcagtcctaatctaaatcctgctaagttatgatatatcgtatttttatatgttgccgagttcagttttctaggattttgttgataattttttgcatctggg--------------------------ttcttttttcatgacttttttttctggttttggtatcagaataatactggctttatagaatgagttgggaagtattcttttctcttctatgttctaaaataattttgtgaagaattagtattac i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163854931 542 + 165299245 CACCATCTTCTTCTGGATTGGCCTTGTATATAAATGGAAAGCCTGGGTATCCTTCTCCTGTTCCTGATTTTAGGGGGGAATCATTCTGCTTTTCTCTGTTAAGTATGCTGTTAACTGTGGGTTTTTCACAGATACATTTTATCACATTGGGGAAGTTGTCT-CCTATtactagtttgttgagaatttatTCCGTGagtggatgttgaattttgtcaaatgcttttttt-aaatt-ttcattcattgagataatcatgtatttttgtccttcattaaAATGTTGTATTACATTACTTGACATTTGGATGTTGCAGCAACCTTGCAGTCCTAATCTAAATCCTGCTAAGTTatgatatatcatatttttatatgttgccGAGttcagttttctagtattttgttgggaattttttgcatctggg--------------------------ttcttttttcatgac-tttttttctggttttggtatcagaataatactggctttatagaatgagttgggaagtattcttttctcttctatgttctaaaataattttgtgaagaattagTATTAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96632649 543 + 98384682 cACCATCTTCTTCTGGATTGGCCttgtatataaatggaaagcctgggtatccttctcctgttcctgattttaggggggaatcattctgcttttctctgttaagtttgctgttaaccgtgggtttttcacagatacattttatcacattggggaagttgtct-cctattactagcttgttgagaatttattccatgagtggatgttgaattttgtcaaatgcttttttttttttt-ttcattcattgagataatcatgtatttttgtccttcattaaaatgctgtattacattacttgacatttggatgttgcagcaaccttgcagtcctaatctaaatcctgctaagttatgatatatcgtatttttatatgttgccgagttcagttttctagtattttgttgagaattttttgcatctggg--------------------------ttcttttttcatgac-tttttttctggttttggtatcagaataatactggctttatagaatgagttgggaagtattcttttctcttctatgttctaaaataattttgtgaagaattagtattac i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169835703 552 + 171630274 CGCCATCTTCTTCTTGACTGGCCTTGTAGATAAATGCAAAGCCtgggtatccttcttctgttcctgattttaggggaga-ccattctgcttttcttcattgtgtatgccgttaa-tgtgggtttttcacagatccggtttatcaccttggggaagttgtctccctattactactttgttgagaattgattctatgagtggatgttgaattttgtcaactgctttg-------tt-ttcattcattgaggtgattgtgtatttttgtcctctattaaaatgctgtattacattaattgatatttggatgttgtaccaacctcgcagtcctaatct-aatcctactaagtcaccatttatcatctttttatatactgccgagttcagcttcctagtattttgctgatga-tttttgcatttctgttcacaagagacattggtctatggt-ttcctttttcatgatatttttctctggttttgatgtgagaataatgctggctttgtggaatgag-tgggaagcattctt-----ttctacattctaacagagttttgtgaggaattagtgtcg- i calJac3.chr4 I 35 C 0 e canFam3.chr1 56141435 1862 + 122678785 I e ponAbe2.chr6 172400814 442 + 174210431 M a score=2671667.000000 s hg38.chr6_KB021644v2_alt 36322 932 + 185823 ttctttaagtctttggtagaatttgtcctgaagccatctgtgcctcagatttcctttgtgggttggaagatttttcattattaattctttttatttcccatagaaatattctgag--tttttttgttttgagtcattttcggtaatttgcatggccagaaatttgttcatttttatctaaa-----tatctatttgttggcctaaatgtgttctgtttttcctcattattcttttggcttctataaggtgggtagtcatgtttacttttttattcctgattttggtaatttttttcttttcttttttttcttgat-agtctagctaaagcttagccaatttttttgatctctttacagaaccaacttttggtttcatttatttctgtattgattt--tattttctatttcattgatttattatctaatctttgttatttccttcattttgcttcccttgggcttacttgatacatcttttctagcttctgaaggtgaaaactcaggtgattttattgagatctttc-ttttttccaatagag-------------------------ccatttcaagctatacttctccaacagccactacttttcctgcatcttataaaagctataatgt---ctttttattttcattgaattcaaaattctacctttcattgagatttcttccttgaaataatattagagtatattgtttgtatttgcgtattttctgaatttcttcctgctgttgatttttaatttaatttctctgtggttgaagaacattttttacatgacaattaattttatattgattgaggcttgttttagaacttaatatgtggtctattctggaCCTAAAGATAGATAGTGTTTGAACAAAGGTCAGTTCACCAGGAACTTGTCATAATCCAAATACGTTATATCCTCTGATCTGTTCGGCTCAGAACTGTTTATCAACAAATGCACCGCGT s panTro4.chr6 170649627 935 + 172623881 ttctttaagtctttggtagaatttgtcctgaagccatctgtgcctcagatttcctttgtgggttggaagatttttcattattaattctttttatttctcatagaaatattctgag--tttttttgttttgagtcattttcggtaatttgcgtggccagaaatttgttcatttttatctaaa-----tatctacttgttggcctaaatgtgttctgtttttcctcattattcttttggcttctataaggtgggtagtcatgtttacttttttattcctgattttggtaatttttttcttttcttttttttcttgattagtctagctaaagcttacccaatttttt-gatctctttacagaaccaacttttggtttcatttatttctgtattgattt--tattttctatttcattgatttattatctaatctttgttatttccttcattttgcttcccttgggtttacttgatatgtcttttctagcttctgaaggtgaaaactcaggtgattttattgagatctttc-ttttttccaatagag-------------------------ccatttcaagctatacttttccaacagccactacttttcctgcatcttataaaagctataatgttgtctttttattttcattgaattcaaaattctacctttcattgagatttcttccttgaaataatattagagtatattgtttgtatttgcgtattttctgaatttcttcctgctattgatttttaatttaatttctctggggttgaagaacattttttacatgacaattaattttatattgattgaggcttgttttagaacttaatatatggtctattctggaCCTAAAGATAGATAGTGTTTGAACAAAGGTCAGTTCACCAGGAACTTGTCATAATCCAAGTACGTTATATCCTATGATCTGTTAGGCTCAGAACTGTTTCTCAACAAATGCACTGCGT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172401258 935 + 174210431 ttctttaagtctttggtagaatttgtcctgaagccatctgtgcctcagatttcctttgtgggttggaagatttttcattattaattctttttatttcgcacagaaatattctgag--tttttttgttttgagtcatttttggtaatctgtgtcaccagaaatttgttcatttttatctaaa-----tatctgcttgttggcctaaatgtgttctgtttttcctcattattcttttggcttctgtaacgtgggtagtcatgtttacttttttattcctgattttggtaatttttttcttttcttttttttcttgactagtctagctaaagcttagccaattttgttgatctctttacagaaccaacttttggtttcatttatttctgtattgattt--tattttctatttcattgatttattatctaatctttgttatttccttcattttgcttcccttgggtttactttatacatcttttctagcttctgaaggtgaaaactcaggtgattttattgagatgtttc-ttttttccaatacag-------------------------cgatttcaagctatacttttccaacagtcactacttttcctgtatcttataaaagctataatgttgtctttttattttcattgaattcaaaatgctacctttcattgagatttcttccttgaaataatattagagtatattgtttgtatttgtgtattttctgaatttcttcctgctatagatttttaatttaatttctctgtggttgaagaaca-tttttacatgacaattaattttatactgattgaggcttgttttagaacttaatatatggtctattctggaCCTAAAGATAGATAGTGTTTGAACAAAGATCAGTTCACCAGGAACTTGTTGTAATCCAAATACATTATACCCTATGATCTGTTAGGCTCAGAACTGTTTCTCAACAAATGCACTGCAT i ponAbe2.chr6 M 442 C 0 s nomLeu3.chr3 156259623 935 + 157873769 ttctttaagtctttggtagaatttgtcttgaagccacctatgcctcagatttcctttgtgggttggaagatttttcattattaattctttttgtttctcatagaaatattctgag---ttttttgttttgagtcatttttggtaatttgtgttgccagaaatttgttcatttttatttaaa-----tatctacttgttggcctaaatgtgttctgtttctcttcattattcttttggcttccataaggtgggtagtcatgtttactttcttattcccgattttggtaatttttttcttttcttttttttcttgactggtctagctaaagcttagccaattttgttgatctctttacagaaccaacttttggtttcatttatttctgtattgattt--tattttctatttcattgatttattatctaatctttgttatttccttcattttgcttcccttgggtttactttatacatcttttctagcttctgaaggtgaaaactcgggtgactttattgagatctttc-ttttttccagtagag-------------------------ccatttcaagctatacttttccaaaagccagtacttttcctgcatcttataagagctataatgttgtctttttgttttcattgaattcaaaatgccacctttcattgagatttcttccttgaaataatattagagtatattgtttatatttgtgtgttttctgaatttcttcctgctattgatttttaatttaatttctctgtggttgaagaccattttttatatgacaattaattttatattgattgaggcttgttttagaacttaatatatggtctattctggaCCTAAAGATAGATAGTGTTTGAACAAAGGTCAGTTCACCAGGAACTTTTCATAATCCAAATACGTTATACCCTATGATCTGTTAGGCTCCGAACTGTTTCTCAAGAAATGCACTGTGT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168081331 956 + 169853907 ttccttcagtctttggtagaatttgtcccaaagccatctgtgcttcagatttcctttgtggattgaaagatgtttcattgttaattctttttatttctcatagaaatattctgag-ctttttttgttttgagggatttttggtaatttgtgtcaccagaaatttgttcattttcatctaaa-----tatctatttgttggcctaaatgtgttctgttttctctcattattcttttggcttctataaagtgggtagtcatgtttacttttttattcctgattttggtaatttttgtct----tttattttcttgactactctggctaaagctttgccaattttgttgatctctttacagaaccagcttttggtttcattcatttctgtaatgattt--tcttttctatttcattgatttattttctaatctttgttatttccttcattttgcttcccttgggtttactttatacatcttttttagcttctgaaggtgaaaactcaggtgattttattgagatctttc-tttcttccaatacaatacagatctttcttttttcttttttccatttcaagctatacttttccaacagccactacttttcctgcatcttataaaagttataatgttgtctttttattttcattgaattcaaaatgctaattttcgttgagatttcttccttgaaataatattagagtgtattgtttgtatttgtgtattttctgaatttcttcctgctattgattcttaatttaatttctctgtggttgaagaaca-tttttatgtgacaattaattttatattgattgaggcttg-tttagaacttaatatattgtctattctggaCCTAAAGATAGATAGTGTTTGAACAAAGGTCAGTTCACCAGGAATTTGTCATAATTCAAATACGTTATACCCTATGATCTGTTAGGCTCAGAATCGTTTCTCAATGAACGGGCTGCGT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169037084 956 - 170955103 ttccttcagtctttggtagaatttgtcccaaagccatctgtgcttcagatttcctttgtggattgaaagatgtttcattgttaattctttttatttctcatagaaatattctgag-ctttttttgttttgagggatttttggtaatttgtgtcaccagaaatttgttcattttcatctaaa-----tatctatttgttggcctaaatgtgttctgttttctctcattattcttttggcttctataaagtgggtagtcatgtttacttttttattcctgattttggtaatttttgtct----tttattttcttgactagtctggctaaagctttgccaattttgttgatctctttacagaaccagcttttggtttcattcatttctgtaatgattt--tcttttctatttcattgatttattttctaatctttgttatttccttcattttgcttcccttgggtttactttatacatcttttttagcttctgaaggtgaaaactcaggtgattttattgagatctttc-tttcttccaatacaatacagatctttcttttttcttttttccatttcaagctatacttttccaacagccactacttttcctgcatcttataaaagttataatgttgtctttttattttcattgaattcaaaatgctaattttcgttgagatttcttccttgaaataatattagagtgtattgtttgtatttgtgtattttctgaatttcttcctgctattgattcttaatttaatttctctgtggttgaagaaca-tttttatgtgacaattaattttatattgattgaggcttg-tttagaacttaatatattgtctattctggaCCTAAAGATAGATAGTGTTTGAACAAAGGTCAGTTCACCAGGAATTTGTCATAATTCAAATACGTTATACCCTATGATCTGTTAGGCTCAGAATCGTTTCTCAATGAACGGGCTGCGT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163855473 958 + 165299245 TTCCTTCAGTCTTTGGTAGAATTTGTCCTGAAGCCATCTGTGCTTCAGATTTCCTTTGTGAATTGGAagatttttcattattaattctttttatttctcatagaaatattctgagtttttttttgttttgagtgatttttggtaatttgtgtcaccagaaatttgttcatttttatctaAA-----TATCTATTTGTTGGCCTAAATGTGTTCTGTTTTCCCTCATTATTCTTTTGGCTTCTATAAAGTGGGTAGtcatgtttacttttttattcctgattttggtaatttttgtct----ttttttttcttgactagtCTGGCTAAAGCtttgccaattttgttgatctctttacagaaccagcttttggtttcattcatttctgtaatgattt--tcttttctatttcattgatttattttccaatctttgttatttccttcattttgcttcCCTTGGGTTTACTTTATACATCTTTTTTAGCTTCTGAAGGTGAAAACTCAGGTGAttttattgagatctttctttttttccaatacaatacagatctttcttttttcttttttccatttcaagctatacttttcCAACAGCCACTACTTTTCCTGCATCTTATAAAAGTTATaatgttgtctttttattttcattgaattcAAAATGCTAATTTTCGTTGAGATTTCTTCCTTGAAATAATATTAGAGtgtattgtttgtatttgtgtattttctgaatttcttcctgctatttatttttaatttaatttctttgtggttgaagaaca-tttttatgtgacaattaattttatattaattgagGCTTG-TTTAGAACTTAATATATTGTCTATTCTGGACCTAAAGATAGATAGTGTTTGAACAAAGGTCAGTTCACCAGGAATTTGTCATAATTCAAATACGTTATACCCTATGATCTGTTAGGCTCAGAATCGTTTCTCAATGAACGGGCTGCGT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96633192 956 + 98384682 ttctttcagtctttggtagaatttgtcctgaagccatctgtgcttcagatttcctttgtggattggaagatgtttcattgttaattctttttatttctcatagaaatattctgagtttttttttgttttgagtgatttttggtaatttgtgtcaccagaaatttgtttattttcatctaaa-----tatctatttgttggcctaaatgtgttctgttttctctcattattcttttggcttctataaagtgggtagtcatgtttacttttttattcctgattttggtaatttttgtct----ttttttttcttgactagtctggctaaagctttgccaattttgttgatctctttacagaaccagcttttggtttcattcatttctgtaatgattt--tcttttctatttcattgatttattttctaatctttgttatttccttcattttgcttcccttgggtttactttatacatcttttttagcttctgaaggtgaaaactcaggtgattttattgagatctttc-ttttttccaatacaatacagatctttattttttcttttttccatttcaagttatacttttccaacagccactacttttcctgcatcttataaaagttatagtgttgtctttttattttcattgaattc-aaatgctaattttcattgagatttcttccttgaaataatattagagtgtattgtttatatttgcgtattttctgaatttcttcctactattgatttttaatttaatttctatgtggttgaagaaca-ttcttatgtgacaattaattttatattaattgaggcttg-tttagaacttaatatattgtttattatggaCCTAAAGATAGATAGTGTTTGAACAAAGGTCAGTTCACCAGAAATTTGTCGTAATTCAAATACGTTATACCCTATAATCTGTTAGGCTCAGAATCGTTTCTCAATGAACGGGCTGCGT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169836255 931 + 171630274 tgctttaagccttcggtagaatttctcataaagtcatcagtgtctcagatttcctttgtgggttggaagatttttcattattaaagctttttatttctcatagaaatattccgag--tttctatgttttgaggtatgtttggaaatttgtgttgccagaaatgtgttcatttttatcttaactgtctaaatatttgttggcacaaatgtgttctgtttttccctatgactctttcagtttctgtaaggtaggtaggcatgtttgcttttt--attctgattttggtaattgttgtct----ttctttttcttgactagtctaggtaaagctttgccaattttgttgatacgtttactgaactg--ttttggtttcactgatttctgtattgattttctcttttctatttcattgatttattatctaatctttgttattttcttcattttgttttccttgggtttactttgtatgtcttttctagcttctgaaggtgaaaactgaggagattgtattgagatctttc-tttttgccaatagag-------------------------tcattgcaggctacacctttctaatagccaccacgtttcctgcatcttataaatgctataacgctgtctttttattttcatcgagttcaaagtactcactttcattgagatttcttccttgaaacaatgttagagtgaattgtttatatttgtgtattttctgaattt----ctgctactgatgtttcatttaatttctctgtggttgaagaatgttttttgcgtgacaattaatttcatattgattgaggcttgttttagaacttgatatatggtctattctggaTCTAAAGATACATAGTGTTTGAACAAAGGTCAGTTCACCAGGAATTTGTGGTAATCTGAATACCTTGTACCCTATGATCTGTTAGGCTCAGAACCTTTTCTCAACGAATGCAGTGCGC i calJac3.chr4 C 0 I 575 e canFam3.chr1 56141435 1862 + 122678785 I a score=402857.000000 s hg38.chr6_KB021644v2_alt 37254 138 + 185823 CCCTGCCCTCGGGTCCTGTCTGTGCACAGTGCGCCCAGAGTTCCTTCTCTTTTTATCCGCCCATTACCTTCCCATTCAGTTGTTGTTATTCTTTACCATTTAGACGGCATGTGTGCATGTGTGTGTATCTTTTCTCCA s panTro4.chr6 170650562 137 + 172623881 CCCTGCCCTCAGGTCCTGTCTGTGCACAGTGCGCCCAGAGTTCCTTCTCTTTTTATCTGCCCATTAC-TTCCCATTCGGTTGTTGTTATTCTTTACCATTTAGACGGCATGTGTGCATGTGTGTGTATCTTTTCTCCA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172402193 138 + 174210431 CCCTGCCCTCGGGTCCTGTCTGTGCACAGTGCACCCAGAGTTCCTTCTCTTTTTATCTGCCCATTACCTTCCCATTCAGTTGTTGTTATTCTTTACCATTTAGATTACATGTGTGCATGTGTGTGTATCTTTTCTCCA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156260558 138 + 157873769 CCCTGCCCTCGGGTCCTGTCTGTGCACAGTGCGCCCAGAGTTCCTTCTCTTTTTATCTGCCCATTACCTTCCCATTCAGTTGTTGTTATTCTTTACCATTTAGATGGCATGTGTGCATGTGTGTGTATCTTTTCTCCA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168082287 138 + 169853907 CCCTGACCTCGGGTCCTGTGTGTGCACAGTGTGCCCAGAGTTCCTTCTCTGTTTATCTGCCCATTACCTTCCCATTCAGTTGTTATTATTCTTTACCATTTAGATGGCATATGTGCATGTGTGTGTACCTTTTCTCCA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169038040 138 - 170955103 CCCTGACCTCGGGTCCTGTGTGTGCACAGTGTGCCCAGAGTTCCTTCTCTGTTTATCTGCCCATTACCTTCCCATTCAGTTGTTATTATTCTTTACCATTTAGATGGCACATGTGCATGTGTGTGTACCTTTTCTCCA i macFas5.chr4 C 0 I 414 s papAnu2.chr4 163856431 138 + 165299245 CCCTGCCCTCGGGTCCTGTGTGTGCACAGTGCGCCCAGAGTTCCTTCTCTGTTTATCTGCCCATTACCTTCCCATTCAGTTGTTATTATTCTTTACCATTTAGAtggcatatgtgcatgtgtgtgtacctTTTCTCCG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96634148 138 + 98384682 CCCTGCCCTCGGGTCCTGTGTGTGCACAGTGTGCCCAGAGTTCCTTCTCTGTTTATCTGCCCATTACCTTCCCATTCACTTGTTATTATTCTTTACCATTTAGATGGCATATGTGCATGTGTGTGTACCTTTTCTCCG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169837761 134 + 171630274 CCCCGCCCTCAGGTCCCGTCTACGTGCAGTGCGTCCAGAATTCCT--TCTGTTTATCTGCCCATTACCTTCCCACTCAGTTGTTACTGTCCTTTACCG-TTAAATGGCATATGCACACGTGTGTGTATC-TTTCTCCA i calJac3.chr4 I 575 C 0 e canFam3.chr1 56141435 1862 + 122678785 I a score=114279.000000 s hg38.chr6_KB021644v2_alt 37392 40 + 185823 AAGGTGAGATAGTTCACTGTTAATAGTTCATTTGGATAGT s panTro4.chr6 170650699 40 + 172623881 AAGGTGAGATAGTTCACTGTTAATAGTTCATTTGGATAGT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172402331 40 + 174210431 AAGGTGAGATAGTTCACTGTTAATAGTTCATTTGGATAGT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156260696 40 + 157873769 AAGGTGAGATAGTTCACTGTTAACAGTACATTTGGATAGT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168082425 40 + 169853907 AAGGTGAGAGAGTTCACTGTTCATAGTTCATTTGGATAGT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169038592 40 - 170955103 AAGGTGAGAGAGTTCACTGTTCATAGTTCATTTGGATAGT i macFas5.chr4 I 414 C 0 s papAnu2.chr4 163856569 40 + 165299245 AAGGTGAGAGAGTTCACTGTTCATAGTTCATTTGGATAGT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96634286 40 + 98384682 AAGGTGAGATAGTTCACTGTTCATAGTTCATTTGGATAGT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169837895 37 + 171630274 AAGGTGAACTCGTTCA---TTAATAGTTCATTTGGATAGT i calJac3.chr4 C 0 I 311 e canFam3.chr1 56141435 1862 + 122678785 I a score=13363.000000 s hg38.chr6_KB021644v2_alt 37432 6 + 185823 TACCTT s panTro4.chr6 170650739 6 + 172623881 TACCTT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172402371 6 + 174210431 TACCCT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156260736 6 + 157873769 TACGTT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168082465 6 + 169853907 TACCTT i rheMac3.chr4 C 0 I 310 s macFas5.chr4 169038632 6 - 170955103 TACCTT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163856609 6 + 165299245 TACCTT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96634326 6 + 98384682 TACCTT i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169837932 311 + 171630274 I e canFam3.chr1 56141435 1862 + 122678785 I a score=12992.000000 s hg38.chr6_KB021644v2_alt 37438 5 + 185823 AAGAA s panTro4.chr6 170650745 5 + 172623881 AAGAA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172402377 5 + 174210431 AAGAA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156260742 5 + 157873769 AAGAA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168082781 5 + 169853907 aagaa i rheMac3.chr4 I 310 C 0 s macFas5.chr4 169038638 5 - 170955103 AAGAA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163856615 5 + 165299245 AAGAA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96634332 5 + 98384682 AAGAA i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169837932 311 + 171630274 I e canFam3.chr1 56141435 1862 + 122678785 I a score=1657785.000000 s hg38.chr6_KB021644v2_alt 37443 592 + 185823 TTTGGGACTCAAAGTTAATACTTTGATTTACAGGTCTGTGTATTTCAATAACTGTAAGACAGTGTATAAATAAACACAAAGACACACATACACACTAAGGGAAAGTACACTGGGACATTTATTCCAGGAAGACAACCTCACCAGAGTTCAGTCCACTGACATCTGGCAGCTCCTCTTTGGGGGTTCTGTTACTGAAAGAGGAAGGGGTTAGTTCTCAAGTAAACTCACCCCTAACCTGACTCAAAATCAGTACTCTGGAGGCTAGAAGTATAGCAAGGGGCCAGCCTAACAGGTCAGCAATTTCTACAGCAAGAAAGAGTAAAACATTGGCCACATTACGTAGTGATGTTAAAGCCAACGATATGAAATATATTATAGGAAAAGCAATATGTTATAATTTCTGAACCGAGGATGAAAATATTTCCTCGCATTTAAGCATATTCCCAGCATCCCTGGAGAT--A---TAAAAAGCACGATTTGCACAAAATGTGGTATGTGAAATATTTTAACAATTG-TAAGTCCATAAACAGAAATAATTGTTCGCATTTTGAATAATAAAGTAATGAACGGCTTCCAGTTGAAGGGCTACGGCCGT s panTro4.chr6 170650750 592 + 172623881 TTTGGGACTCAAAGTTAATACTTTGATTTACAGGTCTGTGTATTTCAATAACTGTAAGACAGTGTATAAATAAACACAAAGACACACATACACACTAAGGGAAAGTACACTGGGACATTTATTCCAGGAAGACAACCTCACCAGAGTTCAGTCCACTGACATCTGGCAGCTCCTCTTTGGGGGTTCTGTTACTGAAAGAGGAAGGGGTTAGTTCTCAAGTAAACTCACCCCTAACCTGACTCAAAATCAGTACTCTGGAGGCTAGAAGTATAGCAAGGGGCCAGCCTAACAGGTCAGCAATTTCTACAGCAAGAAAGAGTAAAACATTGGCCACATTACGTAGTGATGTTAAAGCCAACGATATGAAATATATTATAGGAAAAGCAATATGTTATAATTTCTGAACCGAGGATGAAAATATTTCCTTGCATTTAAGCATATTCCCAGCATCCCTGGAGAT--A---TAAAAAGCACGATTTGCACAAAATGTGGTATGTGAAATATTTTAACAATTG-TAAGTCCATAAACAGAAATAATTGTTCGCATTTTTAATAATAAAGTAACGAACGGCTTCCAGTTGAAGGGCTGTGGCCGT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172402382 585 + 174210431 TTTGAGACTCAAAGTTAATACTTTGCTTTACAGGTCTGTGTATTTCAATAACTGTAAGAAAGTGTATAAATAAACTCAAAGACACACATACACACTAAGGGAAAGTACACTGGGACATATATTCCAGGAAGACAACCTCACCAGAGTTCAGTCCACTGACATCTGGCAGCTCCTCTTTGGGGGTTCTCTTTGTGGAACAGGAAGGCGTTAGTTATCAAGTAAACTCACCTCTAACCTGACCCAAAATCAGTACTCTGGAGGCTAAACGTATAGAAAGGGGCCAGCCTAACAGGTCAGCAATTTCTACAGCAAGAAAGAG-------TTGGCCACATTATGTAGTGATGTTAAAGCCAATGATACGAAATACATTATGGGAAAAGCAATATGTTATAATTTCTGAACTGAGGATGAAAATATTTTCTTGCATTTAAGCATATTCCCGGCATCCTTGGAGAT--A---TAAAAAGCACGATTTGCCCAAAATGTTGTGTGTGAAATATTTTAACAATTG-TAAGTCCATACACAGAAATAATAGTTTGCATTTTGAATAATAAAGTAATGAACGGCTTCCAGTTGAAGGGCTGTGGCCAT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156260747 591 + 157873769 TTTGAGACTCAAAATTAATACTTTGGTTTACAGGTCTGTGTATTTCAATAACTGTAAGAGA-TGTATAAATAAACACAAAGACACACATACACACCAAGGGAAAGTACACAGGGACATTTATTCCAGGAAGACAACCTCACCAGAGTTCAGTCCACTGACATCTGGCAGCTCCTCTTTGGGGGTTCTGTTAGTGGAAGAGGAAGGGGTTAGTTATCAAGTAAACTCACCTCTAACCTGACCCAGAATCACGACTCTGGAGGCTAAAAGTGTAGCGAGGGGCCAGCCTAACAGGTCAGCAATTTCTACAGCAAGAAAGAGTAAAACATTGGCCGCATTATGTAGTGATGTTAAAGCCAATGATACGAAATACATTATAGGAAAAGCAATATGTTATAATTTCTGAACCGAGGATGAAAACATTTCCTTGCATTTAAGCATATTCCCAGCATCCTTGGAGAT--A---TAAAAAGCACGATTTGCACAAAATGTGGTGTGTGAAATATTTTAACAATTG-TAAGTCCATAAACAGAAATAATTGTTCACATTTTGAATAATAAGGTAACGAACGGCTTCCAATTGAAGGGCTGTGGCCAT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168082786 596 + 169853907 TTTGAGACTCAAAGTTAATACTTGGATTTACAGGTCTGTGTATTTCAATAACTGTAGCAGAGTGTATAAATAAACTCAAAGACTCATGTACACACTAAGGGAAAGTACTCTGGGACATTTATTCCAGGAAGACAACCTCACCAGAGTTCAGTTCACTGACATCTGGCAGCTCCTGTCCAGGGATTCTGTTAGTGGAAGAGGAAGGGGTTAGTTATCAAGTAAACTCACCTCTAACCTGACCCCAAATCAGGACTCTGGAGGCTGGAAGTGTAGTGAGGGGCCAGCCTAACAGGTCAGCAGTTTCTACAGCAAGAAGGAGTAAAACATTGGCCACATTATGTAGTGATGTTGAAACCAACAATACGAAATACATTCTAGGAAAAGCAAGATGCTAAAACTCCTGAACTGACGATGAAAATATTTCCTTGTATTTAAGCATATTCCCAGCATCCTTGGAGAT--AAACAAAAAAGCATGATTTGCACAAAATGTGGTGTGTGAAATATTTTAACAATTGTTAAGTCCATAAACAGAAATAATTGTTTGCATTGTGAATAATAAAGTAACGAACGGCTTCCAGTTGAAGGGCTGTGACCGT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169038643 596 - 170955103 TTTGAGACTCAAAGTTAATACTTGGATTTACAGGTCTGTGTATTTCAATAACTGTAGGAGAGTGTATAAATAAACTCAAAGACTCATGTACACACTAAGGGAAAGTACTCTGGGACATTTATTCCAGGAAGACAACCTCACCAGAGTTCAGTTCACTGACATCTGGCAGCTCCTGTCCAGGGATTCTGTTAGTGGAAGAGGAAGGGGTTAGTTATCAAGTAAACTCACCTCTAACCTGACCCCAAATCAGGACTCTGGAGGCTGGAAGTGTAGTGAGGGGCCAGCCTAACAGGTCAGCAGTTTCTACAGCAAGAAGGAGTAAAACATTGGCCACATTATGTAGTGATGTTGAAACCAACAATACGAAATACATTCTAGGAAAAGCAAGATGCTAAAACTCCTGAACTGACGATGAAAATATTTCCTTGTATTTAAGCATATTCCCAGCATCCTTGGAGAT--AAACAAAAAAGCATGATTTGCACAAAATGTGGTGTGTGAAATATTTTAACAATTGTTAAGTCCATAAACAGAAATAATTGTTTGCATTGTGAATAATAAAGTAACGAACGGCTTCCAGTTGAAGGGCTGTGACCGT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163856620 595 + 165299245 TTTGAGACTCAAAGTTAATACTTGGATTTACAGGTCTGTGTATTTCAATAACTGTAGGAGAGTgtataaataaacacaaagacTCATGTACACACTAAGGGAAAGCACTCTGGGACATTTATTCCAGGAAGACAACCTCACCAGAGTTCAGTTCACTGACATCTGGCAGCTCCTCTCCAGGGAGTCTGTTAGTGGAAGAGGAAGGGGTTAGTTATCAAGTAAACTCACCTCTAACCTGACCCCAAATCAggactctggaggctggaagtgtaGTGAGGGGCCAGCCTAACAGGTCAGCAGTTTCTACAGCAAGAAGGAGTAAAACATTGGCCACATTATGTAGTGATGTTGAAACCAACAATACGAAATACATTCTAGGAAAAGCAAGATGCTAAAACTCCTGAACTGACgatgaaaatatttccttgtaTTTAAGCATTTTCCCAGCATCCTTGGAGAT--AAACAAAAAAGCATGATTTGCACAAAATGTGGtgtgtgaaatattttaacaattg-taagtccataaatagaaataattgttTGCATTGTGAATAATAAAGTAACGAACGGCTTCCAGTTGAAGGGCTGTGACCGT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96634337 597 + 98384682 TTTGAGACTCAAAGTTAATACTTTGATTTACAGGTCTGTGTATTTCAATAACTGTAGGAGAGTGTATAAATAAACACAAAGACTCATGTACACACTAAGGGAAAGTACACTGGGACATTTATTCCGGGAAGACAACCTCACCAGAGTTCAGTTCACTGACATCGGGCAGCTCCTCTCCAGGGATTCTGTTAGTGGAAGAGGAAGGGGTTAGTTATCAAGTAGACTCACCTCTAACCTGACCCCAAATCAGGACTCTGGAGGCTGAAAGTGTAGTGCGGGGCCAGCCTAACAGGTCAGCAGTTTCTACAGCAAGAAGGAGTAAAACATTGGCCACATTATGTAGTGATGTTGAAACCAACGATACGAAATACATTCTAGGAAAAGCAAGATGCTAAAACTCCTGCACCCAGGATGAAAATATTTCCTTGTATTTAAGCATATTCCCAGCATCCTTGGAGATAAAAAAAAAAAAGCATGATTTGCACAAAATGTGGCGTGTGAAATATTTTAACAATTG-TAAGTCCATAAACAGAAACAATTGTTTGCATTGTGAATAATAAAGTAATGAACGGCTTCCAGTTGAAGGGCTGTGACCGT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169838243 591 + 171630274 TTAGAGACTCTAAGTTAATACTTTGATTTACAGGTCTGTGTATTTCAGTAACAGTAAGAGAATGTATAAATAAACACAGAGACACGCATACCCACAAAGGAAAAGTGCAGCGGAACATTTACTCCAGGAAGGCAGTGTCACCAGAGTTTAGTCCACCGACGTCTGGCAGCTCCTCTCCAGGGGTTCTGTTAGCAGAGGAGGAAGAGGTGAGTTATCAGGTAAACTCACCTCGAACCTGACCCAAAATCAGGACTCTGGAGACTCAAGGTGTTGTGAGGAGCCATTCTGAGGGGTCAGGAATTTCTACAGCAGGAAAGAGTAAAGGATCAGCCACATGGCGTCATGATATTAAAGCAAATGACATCAAGTGCGTTGTAGGAAAAGCCACCTGCTGTAATTCCTGAACGGACGGTGGCAATGTTCCCTTG-ATTTAAGCATATTCCCAGCATTCTTGGAGAT--A---TAAAAAGCATGGATTGCACAAAATGTGGCGTGTGAAATGTTTTAACAATTG-TAAGTCTCTCGACGGAGATAATTGCTAGCATCATGAATACGACGGTAAGGGACAGCTTCCAGTTGAAGGGCTGCGGGGGC i calJac3.chr4 I 311 C 0 e canFam3.chr1 56141435 1862 + 122678785 I a score=3991298.000000 s hg38.chr6_KB021644v2_alt 38035 1392 + 185823 CCGTGACATTCTGTTCC------CTCCTGCCTCAAGGCCCCTGG-CACTCACACTTGGTA-ACATCCTCCCTTTGAGTT---------GGGACAAAGTCCCCGCGGCTCACAGCCTTGGCCTCAGAGC-----------CTGCACCTCCT----------------GAGGCTCAAGCTGACAGGTAGTGGTTCAGGTGCCC-TGCACATTCAGAGGCCAGTTGGAGAGGAAGAG-----AGCAGGAAAACCAG----ATGTAGGAACTGCATGGAGCAGCTCC--TCTCCTCCTTCCCCTCCTCTCCCCCA------------------------TCTTAGGGAAAGTGCTAACCGTGTCTGCTTCACCCTGCCCAGCTGCAGGAGTCCTGATGAGTGG-----------------GGCCCACGCCTACCCTCAGCTCTTGGCCCTGG-TCCTG------------ACGGTGGTGGAGTTTTAA---ACAAGCATTTTGGAATAGTTTGTTGTG----CACAAATACATTTTTTTTTTTAAAAAAACTGCCTTACACC-----------TGCCTGTCCCAGGAATTCTGAGGACATCTGTATTTT----TTTGTTTGTTTTATGATCCTTAAGAATTAGGAA---ATTTG-----------TCCTACCCTCAGAAAG-tttttttttctttttctttttc---------------tttttttttGAAAGTTAATGATTACCTATACAACCACAAAGGATAAAACATGTTTTGAAATT----GTTAAGTATAATTGGAAAACATTTAGTCTCTATTTTAGATTATTTTGAGTTTAAATATAGTGATAGTTGTGTGGGG---TTTTTTTCAGTGTATGTGAAGCGTGTTTGTATCTGCAGGTTAGCACTTTGGTCTTTCTGGTGTTCCTGGCTTTCAGGTAGCTACAGAAGCATGTGGTGTG--TCTCAGTGGGTTTGTATCTGGGAGCAGCGAAGGAATGTAAATATCAGTGATGTTACCACCAATAAAACTCTATGCCATAAAATACCTCCCTTGTTTTTCAGAGGAGATGCACAGACTCCAGCCTTGGGTAAACAACAGAGCAC---AAGCGTGGTGCCCGTTAGTCAGCTGGGCCAGAGAGTTCA-AAGCCAACCCACATACACTAGCAAAG--ATAGTCCAGGGTGAAACTGGGGATA-GAGAGGCTCAGAGAGTCCCAGGAGGGAGGTTG-TATGTCTCGTTGTGTAGGAGTCCTCTTTGCAGTGGAGAAAACCTGCTCCTGTTAACCATTCCTTTTCCGCTCCTTTTATGAAAGCCATTGTGTTTATTTAGTTCAGCAATGCTTCACTTCACTGGGTTCTTCCAAGTTTTGCTGATCTGCCCACGCCAC-------------------CTTCCTGGCACCTGAAAGCACAGTGTTTTATTCCCTTTGGTTAAGTTTTACAATTAAAATTATGAATTAGGAGACGAAATCCTAAGTTCACACCAACTAG-TTTGGGATTGAAACCGAATTCAAAGATTGACCA--------GGTTTAAGAAGCTCCAA-CCCCTCTCTG-AATTCTTTTTTGATGCA s panTro4.chr6 170651342 1399 + 172623881 CCGTGACATTCTGTTCC------CTCCTGCCTCAAGGCCCCTGG-CACTCACACTTGGTA-ACATCCTCCCTTTGAGTT---------GGGACAAAGTCCCCGCGGCTCACAGCCTTGGCCTCAGAGC-----------CTGCACCTCCT----------------GAGGCCCAAGCTGACAGGTAGTGGTTCAGGTGCCG-TGCACATTCAGAGGCCAGTTGGAGAGGAAGAG-----AGCAGGAAAACCAG----ATGTAGGAACTGCATGGAGCGGCTCC--TCTCCTCCTTCCCCTCCTCTCCCCCA------------------------TCTTAGGGAAAGTGCTAACCGTGTCTGCTTCACCCTGCCCAGCTGCAGGAGTCGTGATGAGTGG-----------------GGCCCACGCCTACCCTCAGCTCTTGGCCCTGG-TGCTG------------ACGGTGGTGGAGTTTTAA---ACAAGCATTTTGGAATAGTTTGTTGTG----CACAAATACATTTTTTTT----AAAAAACTGCCTTACACC-----------TGCCTGTCCCAGGAATTCTGAGGACATCTGTATTTTTTTGTTTGTTTGTTTTATGATCCTTAAGAATTAGGAA---ATTTG-----------TCCTACCCTCAGAAAGttttttttttctttttctttttct-----------ctttttttttttGAAAGTTAATGATTACCTATACAACCACAAAGGATAAAACATGTTTTGAAATT----GTTAAGTATAATTGGAAAACATTTGGTCTCTATTTTAGATTATTTTGAGTTTAAATATAGTGATAGTTGTGTGGGG---TTTTTTTCAGTGTATGTGAAACGTGTTTGTATCTGCAGGTTAGCACTTTGGTCTTTCTGGTGTTCCTGGCTTTCAGGTAGCTACAGAAGCATGTGGTGTGTCTCTCAGTGGGTTTGTATCTGGGAGAAGCGAAGGAATGTAAATATCAGTGATGTTACCACCAATAAAACTCTATGCCATAAAATACCTCCCTTGTTTTTCAGAGGAAATGCACAGACTGCAGCCTTGGGTAAACAACAGAGCAC---AAGCGTGGTGCCCGTTAGTCAGCTGGGCCAGAGAGTTCA-AAGCCAACCCACATACACTAGCAAAG--ATAGTCCAGGGTGAAACTGGGGATA-GAGAGGCTCAGAGAGTCCCAGGAGGGAGGTTG-TATGTCTCGTTGTGTAGGAGTCCTCTTTGCAGAGGAGAAAACCTGCTCCTGTTAACCATTCCTTTTCCGCTCCTTTTATGAAAGCCATTGTGTTTATTTAGTTCAGCAATGCTTCACTTCACTGGGTTCTTCCAAGTTTTGCTGACCTGCCCACGCCAC-------------------CTTCCTGGCACCTGAAAGCACAGTGTTTTATTCCCTTTGGTCAAGTTTTACAATTAAAATTATGAATTAGGAGACGAAATCCTAAGTTCACACCAACTAG-TTTGGGATTGAAACCGGATTCAACGATTGACCA--------GGTTTAAGAAGCTCCAA-CCCCTCTCTG-AATTCTTTTTTGATGCA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172402967 1405 + 174210431 CCGTGACATTCTGTTCC------CTCCTGCCTCAAGGCCCCTGG-CACTCACACTTCGTA-ACATCCTCCCTTTGAGTT---------GGGACAAAGTGCCCGCAGCTCGCAGCCTTGGCCTCAGAGC-----------CTGCACCTCCTGCTTCCCTGATGTTGGGAGGCCCGAGCTGACAGGTAATGGTTCAAGTGCCC-TGCACATTCAGAGGCCAGTTGGAGAAGAAGAG-----AGCAGGAAAACCAG----ATGTAGGAACTGCATGGAGCGGCTCC--TCTCCTCCTTCCCCTCCTCTCCCTCA------------------------TCTTAGGGAAAGTGCTAACCGTGTCTGCTTCACCCTGCCCAGCTGCAGGAGTCGTGATGAGCGG-----------------GGCCCACGCCTACCCTCAGCTCTTGGCCCTGG-TGCTG------------ACGGTGATGGAATTTTAA---ACAAGCATTTTGGAATAGTTTGTTGTT----CACAAATACATTTTTTTTTTTTTTTAAACTGCCTTACACC-----------TGCCTGCCCCAGGAATTCTGAGGACATCTGTGTTTT----TT--TTTGTTTTATGATCCTTAAGAATTAGGAA---ATTTG-----------TCCTACCCTCAGAAAG---TTTTTTTCTTTTTCTTTTTC-------------------TTTTTGAAAGTTAATGATTACCTATACAACCACAAAGGATAAAACATATTTTGAAATT----GTTAAGTATAATTGGAAAACATTTAGTCTCAATTTTAGATTATTTTGAGTTTAAATGTAGTAATAGTTGTGTGGGT---TTTTTTTCAGTGTATGTGAAACGTTTTTGTATCTGCAGGTTAGCACTTTTGTCTTTCTGGTGTTCCTGGCTTTCAGTTAGCTACAAAAGCATGTGATGTGTCTCTCAGTGGGTTTATATCTGGGAGCAGTGAAGGAATGTAAATATCAGTGATGTTACCACCAATAAAACTCTATGCCATAAAATACCTCCCTGGTTTTTCAGAGGAAATGCACAGACTCCAGCCTTGGGTAAACAACAGAGCAC---AAGCATGGTGCCCATTAGTCAGCTGGGCCAAAGAGTTCA-AAGCCAACCCACATACACTAGCAAAGAAATAGTCCAGGGTGAAACTGGGGATA-GAGAGGCTCAGGGAGTCCCAGGAGGGAGGTCG-TATGTCTCGTTGTGTAGGAGTCCTCTTTGCGGTGGAGAAAACCTGCTCCTGTTAACTATTCCTTTACCGCTCCTTTTAGAAAAGCCATTGTGTTTATTTATTTCAGCAATGCTTCACCTCACTAGGTTCTTCCAAGTTTTGCCGACCTGCCCACGCCAC-------------------CTTCCTGGCACCTGAAAGCACAGTGTTTTATTCCCTTTGGTTAAATTTTACAATTAAAATTATGAATTAGGAGATGAAATCCTAAGTTCACACCAACTAG-TTTGGGATTGAAACCGGATTCAAAGATTGACCA--------GGTTTAAGAAGCTCCAA-CCCCTCTCTGAAATTCTTTTTTGATGCA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156261338 1397 + 157873769 CCATGACGTTCTGTTCC------CTCCTGCCTCAAGGCCCCTGG-CACTCACACTTGGTA-ACATCCTCCCTTTGAGGT---------GGGACAAAGTCCCCGCGGCTCACAGCCTTGGCCTCAGAGC-----------CTGCACCTCCTGCTTCCCTGATCTTGGGAGGCCTGAGCTGACAGGTAGTGGTTCAGGTGCCC-TGCACATTCAGAGGCCAGCTGGAGAGGAAGAG-----AGCAGGAAAACCAG----ATATAGGAACTGCATGGAGCGGCTCC--TCTCCTCCTTCCCTTCCTCTCCCCCA------------------------TCTTAGGGAAAGTGCTAACCGTGTCTGCTTCATCCTGCCCAGCTGCAGGAGTCCTGATGAGCAG-----------------GGCCCACGCCTACCCTCCGCTCTTGGCCCTGG-TGCTG------------ACGGTGGTGG--TTTTAA---ACGAGCATTTTGGAATAGTTTGTTGTT----CACAAATACATTTTTTA-----AAAAAACTGCCTTACACC-----------TGCCTGTCCCAGGAATTCTGAGGACATCTGTATTTT----TTT-TTTGTTTTATGATCCTTAAGAATTAGGAA---ATTTG-----------TCCTACCCTCAGAAAG---tttttttctttttctttttt-------------------tttttGAAAGTTAATTATTACCTATACAACCACAAAGGATAAAACATATTTTGAAATT----GTTAAGTATAATTGGAAAACATTTAGTCTCGATTTTAGATTATTTTGAGTTTAAATATAGTAATAGTTCTGTGGGG---TTTTTTTCAGTATATGTGAAACGTTTTTGTGTCTGCAGGTTAGCACTTTGGTCTTTCTGGTGTTCCTGGCTTTCAGTTAGCTACGAAAGCACGTGATGTGTCTCTCAGTGGGTTTATATCTGGGAGCAGTGAAGGAACGTCAATATCAGTGATA-TACCACCAATAAAACTCTATGCCAGAAAATACCTCCCTTGTTTTTCAGAGGAAATGCACAGACTCCAGCCTTGGGTAAACAACAGAGCAC---AAGCGTGGTGCCCATCAGTCAGCTGGGCCAAAGAGTTCA-AAGCCAACCCACATACACTAGCAAAGAAAAAGTCCAGGGTGAAACTGGGGATA-GAGAGGCTCAGAGAGTCCCAGGAGGGAGGTCG-TATGTCTCGTGGTGTAGGAGTCCTCCTTGCGGTGGAGAAAACCTGCTCCTGTTAACCATTCCTTTTCCGCTCCTTTTATAAAAGCCATTGTGTTTATCTGGTTCAGCAATGCTTCACTTCACTAGGTTCTTCCAAGTTTTGCCGACCTGCCCACGCCGC-------------------CTTCCTGGCACCTGAAAGCACAGTGTTTTATTCCCTTTGGTTAAGTTTTACAATTAAAATTATGAATTAGGAGATGAAATCCTAAGTTCACACCAACTAG-TTTGGGATTGAAACCGGATTCAAAGATTGACCA--------GGTTTAAGAAGCTCCAG-CCCCTCTCTG-AATTCTTTTTTGATGCA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168083382 1414 + 169853907 CCGTGGCATTCTGTCCC------CTACTACCTCGAGGCCCCTGG-CACTCACACTTGGAA-ACATCCTCCCTTTGAGTT---------GGGGCAAAGTCCCTGCGGCTCACAGCCTTGGGCTCAGAGC-----------CTGCACCTCCTGCTTCCCTGCTCTTGGGAAGCCTGAGCTGACAGGTAATGGTTCAGGTGCCC-TGAACATTCAGAGGCCAGGTGGAGAGGAAGAG-----AGCAGGAAAACCAG----ATGTAGGAACTGCATGGAGCGGCTCC--TCTCCTCCTTCCCTTC--CGCCCCCA------------------------TCTTAGGGAAGGTGCTAACCATGTCTGCTTCACCCTGCCCAGTTGCAGGAGTCGTGATGAGCGG-----------------GGCCCACACCCACCCTCAGCTCTTGGCCCTGG-TGCTG------------ATGGTGCTGGAGTTTTAA---ACAAACGTTTTGGAATAGTTTGTTGTG----CACAAATACATTTGTTTTT---AAAAAACTGCCTTACACT-----------TGCCTGTCCCAGGAATTCTGAGGACATCTGCATTTT----TT-------TTTGTGATCCTTAAGAATTAGGAA---ATTTG-----------TTCTACCCTCAGAAAGAtttttttctttttttcttttttcttttttc---ttttttttttttGGAAAGTTAGTGATTACCTATACAACCACAAATGATAAAACATGTTTTGAAATT----GTTAAGTATAATTGGAAAACATTTAGTCTCGATTTTAGATTA-TTTGAGTTTAAATGTAATAATAGCTGTGTGGGG--TTTTTTTTCAGTGTGTGTGAAACGTTTTTGTATCTGCAGGTTAGCCATTTGGTCTTTCTGGTGTTCCTGGCTTTGAATTAGCTACAAAAGCATGTGATGTGTCTCTCAGTGGGTTTATATCTGGGATCAGTGAAAGAATGTAAATATCAGTGATGTTACCACCAATAAAACTCTACGCAATAAAATACCTCCCTTGTTTTTCGAAGGAAATGCACTGACTCCAGCCTTGGGTAAACAACAGAGCACATGAAGCATGGTGCCCGTTAGTCAGCTGGTCCAAAGAGTTCA-AAGCCAACCCACATACACTAGCAAGGAAATAGTCCAGGGTGAAACTGGGGATA-GAGAGGCTCAGAGAGTCCCAGGAGGGGAGGTC-TATGTCTCTTGGTGTAGGAGTCCTCTTTGCAGTGGAGAAAACCTGCTCCTGTTAACCATTCCTTTTCCACTCCTTTTATAAAAGCCAT--TGTTTATTTACTTCGGCAATGATTCACTTCACTAGATTCTTCCAAGTTTTGTCGACCTGCCCACGCCGC-------------------CTTCCTGGCACCTGAAAGCACCGTGTTTTATTCCATTTGGTTAAGTTTTATAATTAAAATTATGAATTAGGAGATGAAATCCTCAGTTCCCACCAACTAG-TTTGGGATTGAAACCGGATTCAAAGATTGATCA--------GGTTTAAGCAACTCCAA-TCCCTCTCTG-GTTTCTTTTTTGATGCA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169039239 1406 - 170955103 CCGTGGCATTCTGTCCC------CTACTACCTCGAGGCCCCTGG-CACTCACACTTGGAA-ACATCCTCCCTTTGAGTT---------GGGGCAAAGTCCCTGCGGCTCACAGCCTTGGGCTCAGAGC-----------CTGCACCTCCTGCTTCCCTGCTCTTGGGAAGCCTGAGCTGACAGGTAATGGTTCAGGTGCCC-TGAACATTCAGAGGCCAGGTGGAGAGGAAGAG-----AGCAGGAAAACCAG----ATGTAGGAACTGCATGGAGCGGCTCC--TCTCCTCCTTCCCCTC--CGCCCCCA------------------------TCTTAGGGAAGGTGCTAACCATGTCTGCTTCACCCTGCCCAGTTGCAGAAGTCGTGATGAGCGG-----------------GGCCCACACCCACCCTCAGCTCTTGGCCCTGG-TGCTG------------ATGGTGCTGGAGTTTTAA---ACAAACGTTTTGGAATAGTTTGTTGTG----CACAAATACATTTGTTTTT---AAAAAACTGCCTTACACT-----------TGCCTGTCCCAGGAATTCTGAGGACATCTGCATTTT----TT-------TTTGTGATCCTTAAGAATTAGGAA---ATTTG-----------TTCTACCCTCAGAAAGAtttttttctttttttcttttttc-----------tttttttttttGGAAAGTTAGTGATTACCTATACAACCACAAATGATAAAACATGTTTTGAAATT----GTTAAGTATAATTGGAAAACATTTAGTCTCGATTTTAGATTA-TTTGAGTTTAAATGTAATAATAGCTGTGTGGGG--TTTTTTTTCAGTGTGTGTGAAACGTTTTTGTATCTGCAGGTTAGCCATTTGGTCTTTCTGGTGTTCCTGGCTTTGAATTAGCTACAAAAGCATGTGATGTGTCTCTCAGTGGGTTTATATCTGGGATCAGTGAAAGAATGTAAATATCAGTGATGTTACCACCAATAAAACTCTACGCAATAAAATACCTCCCTTGTTTTTCGAAGGAAATGCACTGACTCCAGCCTTGGGTAAACAACAGAGCACATGAAGCATGGTGCCCATTAGTCAGCTGGGCCAAAGAGTTCA-AAGCCAACCCACATACACTAGCAAGGAAATAGTCCAGGGTGAAACTGGGGATA-GAGAGGCTCAGAGAGTCCCAGGAGGGGAGGTC-TATGTCTCTTGGTGTAGGAGTCCTCTTTGCAGTGGAGAAAACCTGCTCCTGTTAACCATTCCTTTTCCACTCCTTTTATAAAAGCCAT--TGTTTATTTACTTCGGCAATGATTCACTTCACTAGATTCTTCCAAGTTTTATCGACCTGCCCACGCCGC-------------------CTTCCTGGCACCTGAAAGCACCGTGTTTTATTCCATTTGGTTAAGTTTTATAATTAAAATTATGAATTAGGAGATGAAATCCTCAGTTCCCACCAACTAG-TTTGGGATTGAAACCGGATTCAAAGATTGATCA--------GGTTTAAGCAACTCCAA-TCCCTCTCTG-GTTTCTTTTTTGATGCA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163857215 1427 + 165299245 CCGTGACATTCTGTCCC------CTACTACCTCGAGGCCCCTGG-CACTCACACTTGGAA-ACATCCTCCCTTTGAGTT---------GGGGCAAAGTCCCTGCGGCTCACAGCCTTGGCCTCAGAGC-----------CTGCACCTCCTGCTTCCCTGCTCTTGGGAAGCCCGAGCTGACAGGTAATGGTTCAGGTGCCC-TGAACATTCAGAGGCCAGGTGGAGAGGAAGAC-----AGCAGGAAAACCAG----ATGTAGGAACTGCATGGAGCggctcc--tctcctccttcccctc--cgcCCCCA------------------------TCTTAGGGAAAGTGCTAACCGTGTCTGCTTCATCCTGCCCAGTTGCAGGAGTCGTGATGAGCCG-----------------GGCCCACACCCACCCTCAGCTCTTGGCCCTGG-TGCTG------------ATGGTGGTGGAGTTTTAA---ACAAACGTTTTGGAATAGTTTGTTGTG----Cacaaatacatttgttttt---aaaaaactgccttACGCT-----------TGCCTGTCCCAGGAATTCTGAGGAcatcttcatttt----tttg-----tgtgtgatccTTAAGAATTAGGAA---ATTTG-----------TTCTGtcctcagaaagatttttttctttttctcttttttcttttttctttttttttttttttggaaagttaGTGATTACCTATACAACCACAAATGataaaacatgttttgaaatt----gTTAAGTATAATTGGAAAACATTTAGTCTCGATTTTAGATTA-TTTGAGTTTAAATGTAATAATAgttgtgtgggg--ttttttttcagTGTGTGTGGAACATTTTTGTATCTGCAGGTTAGCCCTTTGGTCTTCCTGGTGTTCCTGGCTTTGAATTAGCTACAAAAGCATGTGATGTGTCTCTCAGTGGGTTTATATCTGGGATCAGTGAAAGAATGTAAATATCAGTGATGTTACCACCAATAAAACTCTACGCAATAAAATACCTCCCTTGTTTTTCGAAGGAAATGCACTGACTCCAGCCTTGGGTAAACAACAGAGCACATGAAGCATGGTGCCCATTAGTCAGCTGGGCCAAAGAGTTCA-AAGCCAACCCACATACACTAGCAAAGAAATAGTCCAGGGTGAAACTGGGGATA-GAGAGGCTCAGAGAGTCCCAGGAGGGGAGGTC-TATGTCTCTTGGTGTAGAAGTCCTCGTTGCAGTGGAGAAAACCTGCTCCTGTTAACCATTCCTTTTCCACTCCTTTTATAAAAgccat--tgtttatttatttcggCAATGATTCGCTTCACCAGATTCTTCCAAGTTTTGCCGGCCTGCCCACGCCGC-------------------CTTCCTGGAACCTGAAAGCACCGTGTTTTATTCCATTTGGTTAACTTTTATAACTAAAATTATGAATTAGGAGATGAAATCCTCAGTTCACACCAGCTAG-TTTGGGATTGAAACCGGATTCAAAGATTGATCAGGTTTAAGGGTTTAAGCAACTCCAA-TCcctctctg-gtttcttttttgaTGCA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96634934 1399 + 98384682 CCGTGACATTCTGTTCC------CTACTACCTCGAGGCCCCTGG-CACTCACACTTGGAA-ACATCCTCCCTTTGAGTT---------GGGGCAAAGTCCCTGCGGCTCACAGCCTTGGCCTCAGAGC-----------CTGCACGTCCTGCTTCCCTGCTCTTGGGAAGCCCGAGCTGACAGGTAACGGTTCAGGTGCCC-TGAACATTCAGAGGCCAGGTGGAGAGGAAGAG-----AGCAGGAAAACCAG----ATGTAGGAACTGCATGGAGCGGCTCC--TCTCCTCCTTCCCCTC--GGCCCCCA------------------------TCTTAGGGAAAGTGCTAACCGTGTCTGCTTCACCCTGCCCAGTTGCAGGAGTTGTGATGAGCGG-----------------GGCCCACACCCACCCTCAGCTCTTGGCCCTGG-TGCTA------------ATGGTGGTGGAGTTTTAA---ACAAGCGTTTTGGAATAGTTTGTTGTG----CACAAATACATTTGTTTTT---AAAAAACTGCCTTACACT-----------TGCCTGTCCCAGGAATTCTGAGGACATCTGCATTTT----T--------TTTGTGATCCTTAAGAATTAGGAA---ATTTG-----------TTCTACCCTCAGAAAGAGttttttctttt----------------------tttctttttttGGAAAGTTAGTGATTGCCTATACAACCACAAATGATAAAACATGTTTTGAAATT----GTTAAGTATAATTGGAAAACATTTAGTCTCGATTTTAGATTA-TTTGAGTTTAAATGTAATAATAGTTGTGTGGGGTTTTTTTTTTCAGTGTGTGTGAAACATTTTTGTATCTGCAGGTTAGCCCTTTGGTCTTTCTGGTGTTCCTGGCTTTGAATTAGCTACAAAAGCATGTGATGTGTCTCTCAGTGGGTTTATATCTGGGATCAGTGAAAGAATGTAAATATCAGTGATGTTACCACCAATAAAACTCTACGCAATAAAATACCTCCCTTGTTTTTGGAAGGAAATGCACTGACTCCAGCCTTGGGTAAACAACAGAGCACATGAAGCATGGTGCCCATTAGTCAGCTGGGCCAAAGAGTTCA-AAGCCAACCCACATACACTAGCAAAGAAATAGTCCAGGGTGAAACTGGGGATA-GAGAGGCTCAGAGAGTCCCAGGAGGGGAGGTCGTATGTCTCTTGGTGTAGGAGTCCTCTTTGCAGTGGAGAAAACCTGCTCCTGTTAACCATTCCTTTTCCACTCCTTTTATAAAAGCCATTGTGTTTATTTACTTCGGCAATGATTCGCTTCACTAGATTCTTCCAAGTTTTGCTGACCTGCCCAAGCCGC-------------------CTTCCTGGCACCTGAAAGCGCAGTGTTTTATTCCATTTGGTTAAGTTTTATAATTAAAATTATGAATTAGGAGATGAAATCCTAAGTTCACACCAACTAG-TTTGGGATTGAAACCAGATTCAAAGATTGATCA--------GGTTTAAGCAACTCCAA-TCCCTCTCTG-GTTTATTTTTTGATGCA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169838834 1303 + 171630274 CTGTGACCTTCTGTCCT------CTCCTGCCTCGAGGTCCCTGG-TACTCTCACCTGGGT-ACCATCCTCCTTTGAGTC---------TGAGCAAAGTCACTGTGGCTCACAGCCTTGTCCTCCCAGC-----------CTGCACCTCCTGCTTCCCTGCTCTTGGGAGGCTGGAGATGACAGGTAATGGGTCGGGTCCCCGCGCACATTCAGAGGCCAGGAGGAGAGGAGGAC-----AGCGGGAAAACCAG----GTGTAGGAACTGCTTGGGGCAGCTCC--TCTCCTTCTCCCCCCT--------CA------------------------TCTTAGGGAAAGCACTCAGTGTCTGAGCTTCACCCTGCCTGGCCTCGGGCGTCGTGATGAGCGG-----------------GACCCACGCCCACCCTCAGCTCTTGGCCCTGG-TGCTG------------ATGGAGGTAGACTTTTAA---ACAAGCATTTTA-----------------------------------------AAAGACCTGCCTTATACCCCCACCTCACGCCCCCATCCCAGGAATTCTGAGGAC-TCTGAGTTTT----TT-------TTAATTATCTTTAAGAATTATGAA---ATTTG-----------TCCTAACCTCAGAAAA-TAGTTTTTTCTTTTTCT------------------------TTCTGGAAAGTTAATGATTTCCTATATAAGCACAAATGATAAAACGTGTTTTGAAATT----GTCAAGTCTAAGTGGAAAACATCTAGTCTAGATTCTGGATTATTCTGAG------TGTAGTAACAGTTGCGTGGGT-----TGTTTGAGTGTATATGAAACGTTTTTGTATCTGCAGGTTTGCCCTTTGATCTCTCTGGGGTTCCTGGCTTTCAGTTAGCTGCAAAAGCATGTGATGTGTCTCTCAGTGGGTTTGTATCTGGGAGCAGTGAAGGAATGTAAATATCGGTGATGTTACCACCAATAAAAGTCTATGCAATAAAATACCTCCCTTGTTTTTCAAAGGAAATGCACTGA-GCCAGCCTTGGGTAAA-AACAGAGCACATGAAGC-TGGTGCCCATTAGTCTGCTGGGCCAAAGAGTTCA-AAGCCAGCCCACATACACTGGCAAAGAAATAGTTCGGGGTGAAGCCGGGGATA-GAGATGCC----GAGTCCT---------GTCG-TATATCTCTGGGTGTAGGAGTCCTCTTCGAGGTGGAGAAAACCACTCGGCGTTAACCCTTCCTTTCCCACTGCTTTTATAAAAGCCAT----CCTGTTTACTTCAGCCACGCTCAGCTTTGATAGATTCCTCCAA-------------------GCCGCA------------------TTTCCCGGCACATGAAAGCCCAGTGTTTTCCTCCTTTTGGTTAAGTTGTATGATTAAAATTATGAATTATGAGATGAAATCCTGGGTTCACACCAACTAG--TTGGGATTGAATCAGAATTCAAAGACTGATCA--------GGTTGAAGAAGCTCCAG-CCCCTCTCTG-G---------------A i calJac3.chr4 C 0 C 0 s canFam3.chr1 56143297 1410 + 122678785 CCGTGGCTGCTTGTTCCACAGGACCCCCGGCTTTGGGCCCCTGGCCAGTCATGCCTGGTATGGAGGCTTAGCCTGAGTCTGGGCCTCAGGGGCATGATGCTC---GCTCACGATCTTGGCATTAAGGCTGCCAAATAGACTCCAAGTCCTGC--------------CAGGCACCACCTGATAGG-----------ACCCCC-CGGGC------AGGCCAGGTGGGTAGGAGGAGCCCCAAGACGAGGGTCCAGGGTCATAGGGGAGCTGCT----GTGGCCCCTGTTTGCCCCTTCCCGCCAATGCAGGCAGGGCAGGGCTGCTGGGAGTAGGGGTCCTGGGGGCAGAA--AGCAGCATCTCCCACAGGCGGCTTGGCTGCAGGAGCAGCGTTGAGCTGTCCACTGAGCTATGTACTGTCCATGCGCCTCCTCAGTCCTTGACTTGggatcctgagaagcaacaacacgctggtgt--ttttaagccacaaac-tttaggagcagtttgttgcgcttccataaaaact------------aaagcaATGGCTTACGCC-----------CAGCTAT-CCAGGAATCCTAAAGACCTCAGTGATTT----GT----------ATGATGCTTAAAAAATTGTAAGGTATTTGACCTTGGGTCATTCTCTCCTCA-AAGG-----TTTCTCTTTTTCTTTTTT-------------------CCTTTGAGTAATAA--ATTATCCCTATAAATACAATTGGTAAAA-ATGCTATAGGATTATTCGTTAAGTAAAATGGGTAAATATTTACCTTAGATTTCAGATTGTTATGAATTTAAGCATAAAAA-----GTATACAT---TTTTTTTTA----AAATGACACATTTTTGTTACTGGAGGTTAGAGTTTTGGGCTCGCTGGTGCTCCTGACCTTCAGCTAAATATGCAAGCATACAATCTGTCTCTCGGTGGGTTTGTATCTGTGAGCATCAGAGGAATGCAAACATCAGTAATGTTACCACCAATAAAACTCTACATGATAAAATAC--CCTCTGGTTTTCAGAGGAGCTGCACCAGCTCTAGCCCTGG--AATCCAATGAGCATGTGAAAGCTGGTGTGCACGTGTCAGCGG-------GAGTTCACAAGCCAGTGACAGTACGCTGG-ACAAAAGGATCTCAAGTCTAACCTGAGGCCAGGACGGGCT------GTCGCAG-------GCTG-CTTGTCT---------GGGGTTCTCTCTG-GGTGCAGAGAGGCTGTCAAAGTGATGTGTCTCTTCTCTTCTCTTTTTGTAAAAACCAA----TTGACGTGTGTCAGTTATACATCGCATCAGTGACTCCTCCAAACCATCGCTAACCTTCCCACACCCCACCTGCCTCATGCTGTTTTATTTTTTAAACTCAGGAGCCCAG-ATTTTGCTATTTTTGGTGACATTTTAGATTCAGAAGTAAGAATTATGAGATGCAATCCTGAGTTCACGTGAGTTAATTTTGAGGTTGAGACAAGAATCACAGATGAATTT---------------GAGACTCCAAGTTCCTCTCTG-G------------TGCA i canFam3.chr1 I 1862 I 5148 a score=939102.000000 s hg38.chr6_KB021644v2_alt 39427 337 + 185823 tttttaattgatccataataattgtgcatctttatggggtacagggtgac-ttctcatacgtgcgtacagtgtgtaatgatcgggtcagggccatctcaaacacctcaaacacttgtcatttcctggtg-ttggtgacatttcagagcttatcttctacctgttttgaaatataaagtaaattattgttagctatagtcaccctactctgctg-----tcaaatattagaacttattccttctatctaaccgtctgtctgtgcccattaagcagcctctcttcccctccctccctgacatccttctcagccactggtaaccagcatttgatgcaccacctctgt s panTro4.chr6 170652741 333 + 172623881 tttttaattaatccataataattgtgcatctttatggggtacagggtgactttctcatatgtgcgtacagtgtataatgatcgggtcagggccatctcaaacacctcaaacacttgtcatttcctggtg-ttggtgacatttcagagcttatcttctacctgttttgaaata-----taaattattgttagctatagtcaccctactctgctg-----tcaaatattagaacttattccttctatctaaccgtctgtctgtgcccattaagcagcctctcttcacctccctccctgacatccttctcagccactggtaaccagcatttgatgcaccacctctgt i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172404372 338 + 174210431 tttttaattgatccataataattgtgcatctttatggggtacagggtgactttctcatacttgcgtacaatgtgtaatgatcgggtcagggtcatctcaagtacctcaaacacttgtcatttcctggtg-ttggcaacatttcagagcttctcttctacctattttgaaatataaagtaaattattgttagctatagtcaccctactctgcta-----tcaaatattagaacttattccttctatctaacggtctgtctgtgcccattaagcagcctctcttcacctccctccctgacatccttctcagcctctggtaaccagcatttgaggcaacacctctgt i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156262735 338 + 157873769 tttttaatcgatccataataattgtgcatctttatggggtacagggtgactttctcttacgtgcatgcggtgtgtaatgatcgggtcagggtcatctcaagtacctcaaacacttgtcatttcctggtg-tcggcaacatttcagagcttctcttctacctatttcgaaatataaagtaaattattgttagctatagtcaccctactctgcta-----tcaaatattagaacttattccttctatctaacggtctgtctgtgcccattaagcagcctctcttcacctccctccctgacatccttcgcagcctctggtaaccagcatttgaggcacctcctctgt i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168084796 338 + 169853907 tttttaattgatccataataattgtgcatctttatggggtgcagggcgactttttcatacgtgcatacaatgtgtaataatcgggtcagggtcatctcacgtacctcaaacactggtcattttcttgtg-ttggcaacatcctagagcttctcttctaccagttttgaaatataaagtaaattattcttagctgtagtcaccctactctgcta-----tcaaatattagaacttattccttctatctaacggtctgtctgtgcccattaaccagcctctcttcatctccctccctgacatccttctcagcctctggtaaccagcagttgatgcaccacctccgt i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169040645 338 - 170955103 tttttaattgatccataataattgtgcatctttatggggtgcagggcgactttttcatacgtgcatacaatgtgtaataatcgggtcagggtcatctcacgtacctcaaacactggtcattttcttgtg-ttggcaacatcctagagcttctcttctaccagttttgaaatataaagtaaattattcttagctgtagtcaccctactctgcta-----tcaaatattagaacttattccttctatctaacggtctgtctgtgcccattaaccagcctctcttcacctccctccctgacatccttctcagcctctggtaaccagcagttgatgcaccacctctgt i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163858642 338 + 165299245 TTTTTAATTGATCCGTAATAATTGTGCATCTTTATGGGGTGCAGGGCGACTTTTTCATAcgtgcatacaatgtgtaataatcggGTCAGGGTCATCTCACGTACCTCAAACACTGGTCATTTCCTTGTG-TTGGCAACATCCTAGAGCTTCTCTTCTACCAGTTTTGAAATATAAGGTAAATTATTCTTAgctgtagtcaccctactctgcta-----tcaaatattagaactTACTCCTTCTATCTAACGGTCTGTCTGTGCCCATTAACCAGCCTCTCTTCACCTCCCTCCCTGAcatccttctcagcctctggtaaccagcaTTTGATGCACCACCTTCGT i papAnu2.chr4 C 0 I 315 s chlSab2.chr13 96636333 338 + 98384682 tttttaattgatccataataattgtgcatctttatggggtgcagggcgactttttcgtacgtgcatacaatgtgtaataatcgggtcagggtcatctcaagcacttcaaacagtggtcatttccttgtg-ctggcaacatcttagagcttctcttctacctattttgaaatataaagtaaattattcttcgctatagtctccctactctgcta-----tcaaatattagaacgtattccatctatctaacagtctgtctgtgcccaataaccagcctctcttcacctccctccctgacatccttctcagcctctggtaaccagcatttgatgcaccacctttgt i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169840137 333 + 171630274 tttttagttaatccataacaattgtgcatctttatgggg-gcagcgtgatgtttccacacatgcatgcaatgtgcattggtcaagcca-ggtgacctcagtgacctcaaacacttgtcatttccttgcgtttggtaacatttcagagcttctcttctacctattttgaaata-----taaattccggtcagctgcagtcaccctactatgctaccctgtcaaatgttagaacttactc---ctatccaac-gtatgtctgtgcccattaaccagcctctcttcacctccgtccctgacacccttctcagcctctggaaaccaccattggacgcaccacgtctga i calJac3.chr4 C 0 C 0 e canFam3.chr1 56144707 5148 + 122678785 I a score=4526.000000 s hg38.chr6_KB021644v2_alt 39764 2 + 185823 ga s panTro4.chr6 170653074 2 + 172623881 ga i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172404710 2 + 174210431 ga i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156263073 2 + 157873769 ga i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168085134 2 + 169853907 gg i rheMac3.chr4 C 0 I 313 s macFas5.chr4 169040983 2 - 170955103 gg i macFas5.chr4 C 0 I 315 s papAnu2.chr4 163859295 2 + 165299245 gg i papAnu2.chr4 I 315 C 0 s chlSab2.chr13 96636671 2 + 98384682 gg i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169840470 2 + 171630274 gg i calJac3.chr4 C 0 C 0 e canFam3.chr1 56144707 5148 + 122678785 I a score=14000.000000 s hg38.chr6_KB021644v2_alt 39766 5 + 185823 gatcc s panTro4.chr6 170653076 5 + 172623881 gatcc i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172404712 5 + 174210431 gatcc i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156263075 5 + 157873769 tatcc i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168085449 5 + 169853907 gatcc i rheMac3.chr4 I 313 C 0 s macFas5.chr4 169041300 5 - 170955103 gatcc i macFas5.chr4 I 315 C 0 s papAnu2.chr4 163859297 5 + 165299245 gatcC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96636673 5 + 98384682 gatcc i chlSab2.chr13 C 0 I 315 s calJac3.chr4 169840472 5 + 171630274 gctcc i calJac3.chr4 C 0 C 0 e canFam3.chr1 56144707 5148 + 122678785 I a score=318142.000000 s hg38.chr6_KB021644v2_alt 39771 111 + 185823 actttgtaaactcccacgtacgagtgagaacacgcgctgtttgtctttctccacctggtttatttcacttcacatcgtgacctctagttccactcatgttgctgcaagtga s panTro4.chr6 170653081 111 + 172623881 actttgtaaactcccacgtacgagtgagaacacgcgctgtttgtctttctccacctggtttatttcacttcacatcatgacctctagttccactcatgttgctgcaagtga i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172404717 111 + 174210431 actttttaaactcccgcgtacgagtgagaacatgcgctgtttgtctttctccacctggtttatttcacttcacatcatgatctctagttccactcgtgttgttgcaagtca i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156263080 111 + 157873769 actctttaaactcccgcgtacgagtgagaacatgcgctgtttgtctttctccgcctggtatatttcacttcacaccatgatctctagttaaacccatgttgctgcaagtca i nomLeu3.chr3 C 0 I 5880 s rheMac3.chr4 168085454 111 + 169853907 actttttaaactcccacgtacaagtgagaacatacgctgtttgtctttctctgcctggcttatttcacttcacatcgtgacctctagttccactcatgttgctgcgagtga i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169041305 111 - 170955103 actttttaaactcccacgtacgagtgagaacatacgctgtttgtctttctctgcctggcttatttcacttcacatcgtgacctctagttccactcatgttgctgcgagtga i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163859302 111 + 165299245 ACTTTTTAAACTCCCACGTAGGAGTGAGAACATACgctgtttgtctttctctgcctggcttatttcacttcacatcgTGACCTCTAGTTCCACTCATGTTGCTGCGAGTGA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96636993 111 + 98384682 actttttaaactcccatgtaggagtgagaacatggggtgtttgtctttctctgcctggcttacttcacttcacatcatgacctctagttccactcatgttgctgcgagtga i chlSab2.chr13 I 315 C 0 s calJac3.chr4 169840477 110 + 171630274 actttttaaactcccacgtacaagtgagaacacgtgctattagtctttctctgcctggctta-ttcacttcacgtcatgacctctggttccactcccgttgctgccggtga i calJac3.chr4 C 0 C 0 e canFam3.chr1 56144707 5148 + 122678785 I a score=4921899.000000 s hg38.chr6_KB021644v2_alt 39882 1795 + 185823 caggatttcattctttttagggctgagtagtattccattgtgtctacatatacggcacattttctttatccgtccagcctttgatggacac--tagcttgattcagtatcttggctactgtgagttgtgcagcagtgaccatgggggtgcacat----acctcttccatgtaaccatttcctttcctttgggtatatgcctagcagcgggattgctggatcataggggagttctatttttagcttttcgagaagccgtcatactgttctcattagtggctgtgctaacttacattcccagcaacagtatatgagag-----------------ttccctgttctcccca--------------------------------------tctttgccagcatttgttatttttttgtcttttggataacaggcattcgaac----tggggtgagacgatgtcgcactgtggttttgatgacatcgagcatttctttgtagacttttttggccatttgtatgtcttctcttgagaaatgtttattcagatactttggtcatttttagatcaattttgtgtttt---gtcgttgtcattgttgctgctgttcagtggtttgagttccttgtatattctggatattagtccctcgtcagaagaatattttctcttattctagaagttgtcttttcactctgttgatag-tttcctttgctgtgcatatgattttagttcaatataactcccatttgtctattttttg-----ttttgttgcctgtgcttttgaagttttggcaaataaatgtttgcctcgacagatatcctgaagaatttctcctatgttttcttctatcagtttcccgttttaggtcttacattgaagtatttaatctgctttggctgtatttttgtggatggtgagagac-ggggtctagttttgttctcttgcacatgaatatccagttttcccagcaccatttattggagagactgccctttcccattgttcgttcttggtgcctctgttgaagaagagttgctataaacacagagatttacttttgggttctctattctattggtctatgtgtctgtttttatattgatacta---tttgctgGTAGAatgc--a------------t------tttttttc-tatttaacttcataataatgctataaagtagatgctgttatctctgtattaaagataagaaatatgagtcctgagaggttgtgcctcggtcagtcatgtgggttagggccagactctggctggggctgtttcaccctaaagccatgcttgtctttccCACAATGTGAAGACTGAAGGTTCTGTTGAGAAAATATTGTGAGAATTTTAAACATGTGGAGACACTGATCTAAAAACAATAGGACCAGTAGGAACACTTTCCTCTAGTGGAAGAAGATAAACAACAAATTCAGAAACTCAAGGGTACCATGACGAAAATACGTAAGAGTGACATGAGAGTAACTCAGAGTGCAGTGTGGGGTGAGGGCAGGACCGAGTCATCAAGACTCttagagaagagctctctgaaagggtgcctttggaatggaaatctgattaatagagaagcggctgtgagaaggtctgaaggtggatcttcccaagggggaggaat-aatttatgcaactgctctgaggcaagCTTGTGTACTGAAAGCCTTCATCAGCTTTCTCTAGTTAT--------------------GCTCTTTGCAGCTGAAAT-AATCTGAAAGTATCCCCTGTCCAGAACACAGCCCTGTCTAGAGTCACTCAAGAAAGGGGCCTCAGAACCGTTGTGGCGCTTCAGCCTCCAGTC-TCATGGATGCAGTTGATCACCACCATCACCACCAGCCCAGCGGAGGTCAGTCCTTCCCCAGGGCT s panTro4.chr6 170653192 1796 + 172623881 caggatttcattctttttagggctgagtagtattccattgtgtctacatatatggcacattttctttatccgtccagcctttgatggacac--tagcttgattcagtatctcggctactgtgagttgtgcagcagtgaccatgggggtgcacat----acctcttccatgtaaccatttcctttcctttgggtatatgcctagcagcgggattgctggatcataggggagttctatttttagcttttcgagaagccgtcatactgttctcattagtggctgtgctaacttacgttcccagcaacagtatatgagag-----------------ttccctgttctccgca--------------------------------------tctttgccagcatttgttatttttttgtcttttggataacaggcattcgaac----tggggtgagacgatgtcgcactgtggttttgatgacatcgagtgtttcttcgtagacttttttggccatttgtatgtcttctcttgagaaatgtttgttcagatacttcggtcatttttaaatcaattttgtgtttt---gtcgttgtcgttgttgctgctgttcagtggtttgagttccttgtatattctggatattagtcccttgtcagaagaatattttctcttattctagaagttgtcttttcactctgttgatag-tttcctttgctgtgcatatgattttagttcaatataactcccatttgtctatttttgg-----ttttgttgcctgtgcttttgaagttttggcaaataaatgtttgcctcgacagatgtcctgaggaatttctcctatgttttcttctatcagtttctcgttttaggtcttacattgaagtatttaatctgctttgggtgtatttttgtggatggtgagagac-ggggtctagttttgttctcttgcacatgaatatccagttctcccagcaccatttattggagagactgccctttcccattgtttgttcttggtgcctctgttgaagaagtattgctataaacacagagatttacttttgggttctctattctattggtctatgtgtctgtttttatattgatacta---tttgctgGTAGAatgc--a------------t------tttttttcgtatttaacttcataataatgctataaagtagatgctgttatctctgtattaaagataagaaatatgagtcctgagaggttgtgcctcagtcagtcatgtgggttagggccagactctggctggggctgtttcaccctaaagccatgcttgtccttcccacAATGTGAAGACTGAAGGTTCTGTTGAGAAAATATTGTGAGAATTTTAAACATGTGGAGACACTGATCTAAAAACAATAGGACCAGTAGGAACACTTTCCTCTAGTGGAAGAAGATAAACAACAAATTCAGAAACTCAAGGGTACCATGAAGAAAATACGTAAGAGTGACATGAGAGTAACTCAGAGTGCAGTGTGGGGTGAGGGCAGGACCGAGTCATCAAGACTCttagagaagagctctctgagagggtgcctttggaatgaaaatctgattaatagagaagcggctgtgacaaggtctgaaggcggatcttcccaagggggaggaat-aatttatacaactgctctgaggcaagCTTGTGTACTGAAAGCCTTCATCAGCTTTCTCCAGTTAT--------------------GCTCTTTGCAGCTGAAAT-AATCTGAAAGTATCCCCTGTCCAGAACACAGCCCTGTCTAGAGTCACTCAAGAAAGGGGCCTCAGAACCGTTGTGGCGCTTTAGTCTCCAGTC-TCATGGATGCAGTTGATCACCACCATCACCACCAGCCCAGCGGAGGTCAGTCCTTCCCCAGGGCT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172404828 1802 + 174210431 caggatttcattcttttgagggctgagtagtattccatcgtgtctacatatatggcacattttctttatccgtccagcctttgatggacac--tagcttgattcagtatcttggctactgtgagttgtgaagcagtgaccataggggtgcacat----atctcttccatgtaatcatttcttttcctttgggtatatgcctagcagcgggattgctggatcataggggagttctatttttagcttttcgagaagccatcatactgttctcattagtggctgtagtaacttacattcccagcagcagtatatgagag-----------------ttccctgttctccacg--------------------------------------tctttgccagcatttgttatttttttgtcttttggataacaggcatccgaactgggtggggtgagatgatgtcacactgtggttttgatgacattgagcattttttcgtagacttttttggccatttgtatgtcttctcttgagaaatgtttattcagatactttggtcatttttaaatcaattttgtgtttt---gtcgttgttgttgttgttgctgttcagttgtttgagttccttgtatattctggatattagtcccttgtcagaagaatattttctctcattctagaagttgtcttttcactctgttgatag-tttcctttcctgtgcatatgattttagttcaatataactcccatttgtctatttttgg-----ttttgttgcctgtgcttttgaagttttggcaaataaatgtttgcctcgactgatgtcctgaagaatttctcctgtgttttcttctatcagtttcccgttttaggtcttacattgaagtatttaatctgctttgggtgtatttttgtagatggtgagagacaggggtctagtttcattctcttgcacatgaatatccagttttcccagcaccatttattggagagactgccctttcccattgtttgttcttggtgcctttgttgaagaagggttgctataaacacagagatttacttttgggttctctattctattggtctatgtgtctgtttttatattgatactattctttgctggtAGAAtgcata------------t------tttttttc-tatttaacttcataataatgctataaagtagatgctgttatctctgtattaaagataagaaatatgagtcctgagaggtcgtgcctcggtcagtcatgagggttagggccagactctggctggggccgtttcaccctaaagccatgcttgtccttcccacAATGTGAAGACTGAAGGTTCTGTTGAGAAAATATTGTAAGAATTTTAAACATGTGGAGACACTGATCTAAAAACAATAGGACCAGTAGGAACACTTTCCTCTAGTGGAAGaagatatacaacaaattcagaaactcaggggtaccatgaagaaaatacgtaagagtgacatgagagtaactcagagtgcagtgtggggtgaaggcaggactgagtcatcaagactcttagagaagggctctctgagagggtgactttggaatgaaaatctgattaatagagaagcggctgtgagaaggtctgaaggcggatcttcccaagggggaggaataaatgtatgcaactgttctgaggcaagCTTGTGTACTGAAAGCCTTCATCAGCTTTCTCCAGTTAT--------------------GCTCTTTGCAGCTGAAATAAATCTGAAAGTATCCTCTGTCCAGAACACAGCCCTGTCTAGAGTCGTTCAAGAAAGGGGCCTCAGAACAGTTGTGGCACTTTAGCCTCCAGTC-TCATGGATGCAATTGATCACCACCATCACCA-----CCAGCGGAGGTCAGTCCTTCCCCAGGGCT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156269071 1804 + 157873769 caggatttcattcttttgagggctgagtagtattccattgtgtctacatatacggcacattttctttatccatccagcctttgatggacac--tagcttgattcagtatcttggctactgtgagttgtgcagcagtgaccatgggggtgcacat----atctttccaatgtaaccatttcttttcctttgggtatatgcctagcagcaggattgctggatcataggagagttctatttttagcttttcgagaagacatcatactgttctcattagtggctgtactaacttacattcccagcagcagtatatgagag-----------------ttccctgttctccaca--------------------------------------tctttgccagcatttgttatttttttgtcttttggataacaggcatccgaaccgggtggggtgagatgatgtcgcactgtggttttgatgacattgagcatttcttcgtagacttttttggccatttgtatgtcttctcttgagaaatgtttactcagatactttggtcatttttaaatcaattttgtgttttgtcgtcgttgttgttgttgttgctgttcagttgtttgagttctttgtgta-tctggatattagtcccttgtcagaagaacattttccctcattctagagcttgtctttttactctgttgatag-tttcctttgctgtgcatatgattttagttcaatataactcccatttgtctatttttgg-----ttttgttgcctgtgcttttgaagttttggcaaataaatatttgcctcagctgatgtcctgaagaatttctcctatgttttcttctatcagtttcccgttttaggtcttacattgaagtatttaatctgctttgggtgtatctttgtggatggtgagagacaggggtctagtttcattctcttgcacatgaatatccagttttctcagcaccatttattggagagactgccctttcccattgtttgttcttggtgcctttgttgaagaagagttgctataaacacagagatttacttatgggttctctattctattggtctatgtgtctgtttttatattgatgctattctttgctggtAGAAtgc--a------------t------attttttc-tatttaacttcataataatggtattaagtggatgctgttatccctgtattaaagataagaa--atgagtcctgagaggtcgtgcctcggtcagtcatgtgggttagggccagactctggctggggctgtttcaccctaaagtcatgcttgtccttcccacAATGTGAAGACTGAAGGTTCTGTTGATAAAATATTGTGAGAATTTTAAACATGTGGAGACACTGATCTAAAAACAATAGGACCAGTAGGAACACTTTCCTCTAGTGGAAGAAGATAAACAACAAATTCAGAAACTCAGGGGTACCATGAAGAAAATACGTAAAAGTGACATGAGAGTAAGTCAGAGTGCAGTAGGGGGTGAGGGCAGGACCAAGTCATCAAGACTCttagagaagggctctctgagagggtgactttggaatgaaaatctgattaatagagaagcagctgtgagaaggtctgaaggcggatcttccccagggggaggaat-aatttatgcaactgctctggggcaagCTTGTGTACTGAAAGCCTTCATCAGCTTTCTCCAGTTAT--------------------GCTCTTTGCAGCTGAAATAAACCTGAAAGTATCCCCTGTCCAGAACACAGCCCTGTCTAGAGTCACTCAAGAAAGGGGCCTCAGAACAGTTGTGGCACTTTAGCCTCCAGTC-TCATGGATGCAATTGATCACCACCATCACCACCAGCCCAGTGGAGGTCAGTCCTTCCCCAGGGCT i nomLeu3.chr3 I 5880 C 0 s rheMac3.chr4 168085565 1826 + 169853907 caggatttccttgtttttagggctgagtagtatcccggtgtgtctacatatacagcacattttctttatccatccagactttgatggacactttagcttgattcagtatcttggctaccgtgagtcgtgcagcagtgaccataggggcgcccgtt---atctcttccatgtaaccatttcctttcctttgggtatatgcctagcagcaggattgctggatcacaggggagttctagttttagctttttgaaaagccttcgtactcttct-cctagttgctgcactaacttacattcccagagacagtatatgagag-----------------ctccctgttctccgca--------------------------------------tctttgccagcatttgttatctttttgtcttttggataatagtcatcctaac----tggggtgagacgatgtcgcactgtggttttgatgacatcgagcatttcttcatagactttttgggccatttgtatgtcttctcttgagaaatgtttcttcagatactttggtcatttttaaatcaattgtgtgtttt---gtcgttg---ttggtgttgctgttcagttgtttgagttccttgtatattctggatattagtcccttgtcagaagaatattttctcgcattccggaagttgtcttttcactctgttgatag-tttcctttgctgtgcatatgatttgagttcgatat-actcccatttgtctatttttgc-----ttttgttgcctgtgcttttgaagttttggaaaataaatatttgcctagactgatggcctgaagcatttctcctatgttttcttctatcattttcccgttttaggtcttacagtgaagtgtttaatctgctttgggtttatttctgtggagggtgagagacaggggactagtttcgttctctggcacatgaatatccagttttcccagcagcgtttattggagagactgtcctttcccactgtttgttcttggtacctttgttgaagaagacttgccataaacccagagatttacttttgggttctctattctgttggtctatgtgtctgtttttatattgatactattctttgctggtAGAATGC--ATGGTTTTTTTTTTGTTTTCTTTTTTTC-TatttaacttcataataatgctattacgtggatgctgttatccctgtactaaagataagaaatatgagccctgagaggtcgtgactcgctcagtcatgtgggttagggccagactctggctggggctgtctcaccctaaagccatgctcgtcccTCCCACAATGTGAAGACTGAAGTTTCTATTGATAAAATATTGTGAGAATTTTAAACATGTAGAGACACTGATCTAAACACAATAGGACCAGTAGGAACACGTTCCtctagtggaagaagataaacaacaaattcagaaattcaggagtaccatgaagcaaatacataagagtggcatgagagaaactcagagtgcagtgtggagtgagggcaggaccga---atcaagactcttagagaagggctctctgagagggtgactttggaatgaaaatctgattcacggagaagcagctctgaga---tctgaaggcggatcttctcaagggggaggagt-aatccatgcaactgctctgaggcaagCTTCTGTACCCAAAACCTTCATCAGCTTTCTCCAGTTATgctctttgcagctctttgcagctctttgcagctGAAATAAATCTGAAAGTATCCCCTGTCCAGAACACAGCCCTGTCTAGAGTCATTCAAGAAAGGGGTCTCAGAACCGTTGTGGCGCTTTAGCCTCTGGTCGTTGTGGATGCAATTGATCACCACCGTCACCA-----CCAGCAGAGGTCAGTCCTTCCCCAGGGCT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169041416 1804 - 170955103 caggatttccttgtttttagggctgagtagtatcccggtgtgtctacatatacagcacattttctttatccatccagactttgatggacactttagcttgattcagtatcttggctaccgtgagtcgtgcagcagtgaccataggggcgcccgtt---atctcttccatgtaaccatttcctttcctttgggtatatgcctagcagcaggattgctggatcacaggggagttctagttttagctttttgaaaagccttcgtactcttct-cctagttgctgcactaacttacattcccagagacagtatatgagag-----------------ctccctgttctccgca--------------------------------------tctttgccagcatttgttatctttttgtcttttggataatagtcatcctaac----tggggtgagacgatgtcgcactgtggttttgatgacatcgagcatttcttcatagactttttgggccatttgtatgtcttctcttgagaaatgtttcttcagatactttggtcatttttaaatcaattgtgtgtttt---gtcgttg---ttggtgttgctgttcagttgtttgagttccttgtatattctggatattagtcccttgtcagaagaatattttctcgcattccggaagttgtcttttcactctgttgatag-tttcctttgctgtgcatatgatttgagttcgatat-actcccatttgtctatttttgc-----ttttgttgcctgtgcttttgaagttttggaaaataaatatttgcctagactgatggcctgaagcatttctcctatgttttcttctatcattttcccgttttaggtcttacagtgaagtgtttaatctgctttgggtttatttctgtggagggtgagagacaggggactagtttcgttctctggcacatgaatatccagttttcccagcagcgtttattggagagactgtcctttcccactgtttgttcttggtacctttgttgaagaagacttgccataaacccagagatttacttttgggttctctattctgttggtctatgtgtctgtttttatattgatactattctttgctggtAGAATGC--A------------TGTTTTTTTTTTTTC-TatttaacttcataataatgctattacgtggatgctgttatccctgtactaaagataagaaatatgagccctgagaggtcgtgactcgctcagtcatgtgggttagggccagactctggctggggctgtctcaccctaaagccatgctcgtcccTCCCACAATGTGAAGACTGAAGTTTCTATTGATAAAATATTGTGAGAATTTTAAACATGTGGAGACACTGATCTAAACACAATAGGACCAGTAGGAACACGTTCCTCTAGTGGAAGAAGATAAACAACAAATTCAGAAATTCAGGAGTACCATGAAGCAAATACATAAGAGTGGCATGAGAGAAACTCAGAGTGCAGTGTGGAGTGAGGGCAGGACCGA---ATCAAGACTCttagagaagggctctctgagagggtgactttggaatgaaaatctgattcacggagaagcggctctgaga---tctgaaggcggatcttctcaagggggaggagt-aatccatgcaactgctctgaggcaagCTTCTGTACCCAAAACCTTCATCAGCTTTCTCCAGTTAT----------GCTCTTTGCAGCTCTTTGCAGCTGAAATAAATCTGAAAGTATCCCCTGTCCAGAACACAGCCCTGTCTAGAGTCATTCAAGAAAGGGGCCTCAGAACCGCTGTGGCGCTTTAGCCTCTGGTCGTTGTGGATGCAATTGATCACCACCGTCACCA-----CCAGCAGAGGTCAGTCCTTCCCCAGGGCT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163859413 1798 + 165299245 CAGGATTTCCTTGTTTTTAGGGCTGAGTAGTATCCCGGTGTGTCTACATATacggcacattttctttatccatccagcCTTTGATGGACACTTTAGCTTGATTCAGTATCTTGGCTACCATGAGTTGTGCAGCAGTGGCCATGGGGGCCCGTGATTACATCTCTTCCATGtaatcatttcctttcctttgggtatatgcctagcagcaggattgctggatcacagggGAGTTCtagttttagctttttgagaagcTTTGGTACTCTTCTCCCTAGTGGCTGCACTAACTTCCATTCCCAGAGACAGTATATGAGAG-----------------CTCCCTGTTCTCcgca--------------------------------------tctttgccagcatttgttatctttttgtcttttggataatagtcatcctaac----tggggtgagaCGATGTCGCACTGTGGTTTTGATGACATCGAGCATTTCTTCATAGACTTCTtgggccatttgtatgtcttctcttgagaaatgtttcttcagatactttggtcatttttaaatcaattgtgtgtttt---gtcgttg---ttggtgttgctgttcagttgtttgagttccttgtatattctggatattagtcccttgtcagaagaatattttctctcattccggaagttgtcttttcactctcttgatag-tttcctttgctgtgcatatGATTTGAGTTCAATAT-actcccatttgtctatttttgc-----ttttgttgcctgtgcttttgaagttttGGAAAATGAATATTTGCCTAGACTGATGGCCTGAAgcatttctcctatgttttcttctatcatTTTCCCGTTTTAGGTCTTACAGTGAAGTATTTAAtctgctttgggtttatttttgtgGAGGGTGAGAGACAGGGATCTAGTTTCGTTCTCTGGcacatgaatatccagttttcccagcagcgtTTATtggagagactgtcctttcccactgtttgttcttggtacctttgttgaaGAAGACTTGCCATAAACCCAGAGATTTacttttgggttctctattctgttggtctatgtgtctgtttttatattgaTACTATTCTTTGCTGGTAGaatgc--a------------tggtttttttttttc-tatttaacttCATAATAATGCTATTACGTGGATGCTGTTATCCCTGTACTAAAGATAAGAAATATGAGTCCTGAGAGGTCGTGACTCGCTCAGTCATGTGGGTTAGGGCCAGACTCTGACTGGGGCTGTCTCACCCTAAAGCCATGCTCGTCCCTCCCACAATGTGAAGACTGAAGTTTCTATTGataaaatattgtgagaattttAAATACGTGGAGACACTGATCTAAACACAATAGGACCAGTAGGAACATGTTCCTCTAGTGGAAGAAGATAAACAACAAATTCAGAAATTCAGGGGTACCATGAAGCAAATACGTAAGAGTGGCATGAGAGAAACTCAGAGTGCAGTGTGGAGTGAGGGCAGGACCGA---ATCAAGACTCTTAGAGAAGGGCTCTCTGAGAGGGTGACTTTGGAATGAAAATCTGATTCATGGAGAAGCGGCTGTGAGA---TCTGAAGGCGGATCTTCTCAAGGGGGAGGAGT-AATCCATGCAACTGCTCTGAGGCAAGCCTGAGTACCGAAAACCTTCATCAGCTTTCTCCAGTTAT--------------------GCTCTTTGCAGCTGAAATAAATCTGAAAGTATCCCCTGTCCAGAACACAGCCCTGTCTAGAGTCATTCAAGAAAGGGGCTTCAGAACCGATGTGGCGCTTTAGCCTCTGGTCGTTGTGGATGCAATTGATCACCACCGTCACCA-----CCAGCAGAGGTCAGTCCTTCCCCAGGGCT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96637104 1797 + 98384682 caggatttccttgtttttagggctgagtagtatcccagtgtgtctacatatacagcacattttctttatccctccagcctttgatggacactttagcttgattcagtatcttggctaccatgagtcatgcagcagtgaccatgggggcgcccctt---atctcttccatgtaacaatttcctttcctttgggtatatacctagcagcgggattgctggatcacaggggagttctacttttagctttttgtgaagccttcatactcttct-cctagttgctgcactaacttccattcccagagacagtatatgagag-----------------caccctgttctccaca--------------------------------------tctttgccagcatttgttatc-ttttgtcttttggataatagtcatcctaac----tggggtgagacaatgtcgcactgtggttttg-----atcgagcatttcttcatagactttttgggccatttgtgtgtcttctcttgagaaatgtttcttcagatactttggtcatttttaaatcaattttgtgtttt---gtcgttg---ttggtgttgttgttcagttgtttgagttccttgtatattctagatattagtcccttgtcagaagaatattttctctcattccagaagttgtcttttcactctgttgatagttttcctttgctgtgcatatgatttgagttcaatat-actcccatttgtgtatttttgc-----ttttgttgcctgtgcttttgaagttttggaaaataaatatttgcctagactgatggcctgaagcatttctcctatgttttcttctatcattttcccgttttaggtcttacactgaagtatttaatctgctttgggtgtatttttgtggagggtgagagacaggggtctagtttcgttctctggcacatgaatatccagttttcccagcagcgtttattggagagactgtcctttcccactgtttgttcttggtacctttgttgaagaagatttgccataaacccagagatttac-tttgggttctctattctgttggtctatgtgtctgtttttatactgatactattctttgctggtAGAATGC--A------------TGATTT-TTttttcc-tatttaacttcataataatgctattacgtggatgctgttacccgtgtactaaagataagacatatgagtcctgagaggtcgtgcctagctcagtcatgtgggttagggccagactctggctggggctgtctcaccctaaagccatgctcgtcccTCCCACAATGTGAAGACTGAAGTTTCTATTGATAAAATATTGTGAGAATTTTAAACATGTGGAGACACTGATCTAAACACAATAGGACCAGTAGGAACACGTTCCTCTAGTGGAAGAAGATAAACAACGAATTCAGAAATTCAGGGGTACCATGAAGCAAATACATAAGAGTGACTTGAGAGAAACTCAGAGTGCAGTGTGGAGTGAGGGCAGGACCGA---ATCAAGACTCttagagaagggctctctgagagggtgactttggaatgaaaatctgattcatggagaagtggctgtgaga---tctgaaggtggatcttctcaagggggaggagt-aatccatgcaactgctctgaggcaagCTTGTGTACCGAAAACCTTCATCAGCTTTCTCCAGTTAT----------GCTCTTTGCAGCTCTTTGCAGCCGAAATAAATCTGAAAGTATCCCCTGTCCAGAACACAGCCCTGTCTAGAGTCATTCAAGAAAGGGGCCTCAGAACCGACGTGGCGCTTTAGCCTCTGGTCGTTGTGGATGCAATTGATCACCACTGTCACCA-----CCAGCAGAGGTCAGTCCTTCCCCAGGGCT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169840587 1813 + 171630274 caggatttcattctttttagggctgagtcgtattctgctgtgtctacaaacacagcacgttttctttatccgttgagcgtttgctgcaccctttgggttgattcggtgtcatggctattgtgagtcgtgcggcagtggacgcgggggtgcacgt----ctgcattccacgtgaccagctcccttcctctgggtgtgcgccttgcagc-ggattgctggatcatagggtggttctgtttctggctgttggagaagccttcatgctgttctccgtggtggctgtactga----cgtgcccggcagcagggtgtgagtggctgctggagaagccttcatgctgttctccgtggtggctgtactgacgtgcccggcagcagggtgtgaggccctttgcccgcacctat------------------------gtcatcctaac----cagggtgagctgatgtcgccctgtggttttggtgacgtggagcattcctctgt-gacttctttggccatttctatgtcttcgtctgagaaatgtgtactcggataccttgacgatttttagttcaactttgtgtttt---gtcg------ttgccgttcctgttcaggtgtttgagctcctcatagagtcgggatgttaattccttgtcagaagaatattttctcccattctagaagttctctcttcactctcttgacgg-tttcctttgctgtgcatgagactgtagtttcatat-actcccatttgtctattttggggtgtttttttttgcctatacttttgaagtttagtcaaataaatttttgcctagaccaatgtcctggagcatttctcctgtgttttgttccagctgcttcccagtctcaggtttacactgacgtgttgaacctgctttgggtttatttctgccaatggcaagagacagggatgtactttcattctgctgcacacgaacacccggttttcccagcgtcgtttactggggagaccgtcctttcccgctgtttgtacttggtgtgtttg-----------ttgctctaaacgcatgggtttacttttgggttctctgttctgctgatccatgtgtctgtttttatgtcgatagtgttatttGCTGGTAGAATAG--A------------AAAGAAATTCATTTC-TatttaacttcccaataacactataaagtagatgctattgttctcgtattagagataagaaatttcagcccctagagaTGGTGCCTCGGTCAGTCATGTGGGTTAGGGCCAGACTCTGGGTAGGGCTGTTTCACCCAAAAGTGAGGCTTGTCCTGCCCACAATGTGAAGACGGAAGATTTCATTGATAAAATACTGTGAGAATTCTATACCTGTGGGGACGCTGATCTAAAAGCGATAGGACCAGTAGGAGCTCTTTCTTCTAGTGGAAGAAAATGAACAACAAATTCAGAAACTCAGGGATACCATGAAGGAAATACGGAAGCCTGACATGAGAGAAAGCCAGAGCGCAGTGTGGGCGGAGGGCAGGGCCCAGTCATCAAGACTCttagagaagggctctctgcgagggcgactttggtgtgaaaatctgctgaatgaagaaacggctgcgagcagttctgaaggcagatcttccccagggggaggaat-gattcctgcagctgctctgagacgagCTTG-GTACCGAAGGCCTTCGCC-GCTCTCTGCAGTTAC--------------------GCTCTTGGCAGCTGAAGTAACTTTGAAAGTATCCCCTGTCCAGAACACAGCCCTGTCTAGAGTCATTTAAGAAA-GGGCCTCAGCACGGTGGTGGCACTGCAGCCTCTGGTCCTTGCGGCTGCAATCGATCACCACCATCACCA-----CCGGCAGATGTCAGTCCTTCCCCAGGGCT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56144707 5148 + 122678785 I a score=15921.000000 s hg38.chr6_KB021644v2_alt 41677 5 + 185823 TTTCA- s panTro4.chr6 170654988 5 + 172623881 TTTCA- i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172406630 5 + 174210431 TTTCA- i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156270875 5 + 157873769 TTTCA- i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168087391 5 + 169853907 TTTCA- i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169043220 5 - 170955103 TTTCA- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163861211 5 + 165299245 TTTCA- i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96638901 5 + 98384682 TTTCA- i chlSab2.chr13 C 0 I 2831 s calJac3.chr4 169842400 5 + 171630274 TTTCA- i calJac3.chr4 C 0 C 0 s canFam3.chr1 56149855 5 + 122678785 -TTCAA i canFam3.chr1 I 5148 C 0 a score=3600.000000 s hg38.chr6_KB021644v2_alt 41682 1 + 185823 G s panTro4.chr6 170654993 1 + 172623881 G i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172406635 1 + 174210431 G i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156270880 1 + 157873769 G i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168087396 1 + 169853907 G i rheMac3.chr4 C 0 I 2909 s macFas5.chr4 169043225 1 - 170955103 G i macFas5.chr4 C 0 I 2847 s papAnu2.chr4 163861216 1 + 165299245 G i papAnu2.chr4 C 0 I 2890 s calJac3.chr4 169842405 1 + 171630274 G i calJac3.chr4 C 0 C 0 s canFam3.chr1 56149860 1 + 122678785 G i canFam3.chr1 C 0 C 0 e chlSab2.chr13 96638906 2831 + 98384682 I a score=4500.000000 s hg38.chr6_KB021644v2_alt 41683 1 + 185823 G s panTro4.chr6 170654994 1 + 172623881 G i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172406636 1 + 174210431 G i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156270881 1 + 157873769 G i nomLeu3.chr3 C 0 I 2627 s rheMac3.chr4 168090306 1 + 169853907 G i rheMac3.chr4 I 2909 C 0 s macFas5.chr4 169046073 1 - 170955103 G i macFas5.chr4 I 2847 C 0 s papAnu2.chr4 163864107 1 + 165299245 G i papAnu2.chr4 I 2890 C 0 s chlSab2.chr13 96641737 1 + 98384682 G i chlSab2.chr13 I 2831 C 0 s calJac3.chr4 169842406 1 + 171630274 G i calJac3.chr4 C 0 I 4162 s canFam3.chr1 56149861 1 + 122678785 G i canFam3.chr1 C 0 C 0 a score=684315.000000 s hg38.chr6_KB021644v2_alt 41684 240 + 185823 TGTTTCTGGCAGCACCTGTCATGTGCTCTGCACACCCTGATGCTGTAT-GTTTGTGTGTGCGTATCCACA--------------------CCATGCAATCACGCAATGAACAGGAACACAGTTTACATTAAGATT---------TCCCTGGAGCT-------CAGCACTGTGAGGGTTGGGAGCGAGCACCGTGGCTCGATGCCTTA-TCAGGGTGGTTGCACATC--TGCGCTAGAACAGAATTCTGCAGGCCTCAAAGTCTAT--TAAAAAATCAAAGGA s panTro4.chr6 170654995 241 + 172623881 TGTTTTTGGCAGCACCTGTCATGTGCTCTGCACACCCTGATGCTGTAT-GTTTGTGTGTGCCTATCCACA--------------------CCATGCAATCACGCACTGAACAGGAACACAGTTTACATTAAGATT---------TCCCTGGAGCT-------CAGCACTGTGAGGGTTGGGAGCGAGCACCGTGGCTCGATGCCTTA-TCAGGGTGGTTGCACATC--TGCACTAGAACAGAATTCTGCAGGCCTCAAAGTCTATA-AAAAAAATCAAAGGA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172406637 241 + 174210431 TGTTTCTGGCAGCACCTGTCATGTGCTCTGCACACCCTGATGCTGTAT-GTTTGTGTGTGCGTATCCACA--------------------CCATGCAATCACGCACTGAGCAGGAACACAGTTTACGTTAAGATT---------TCCCTGGAGCT-------CAGCACTATGAGGGTTGGGAACAAGCACCATGGCTCGATGCCTTA-TCAGGGTGGTTGCACATC--TGCACTAGAACATAATTCTGCAGGCCTCAGAGTCTATT-AAAAAAATCAAAGGA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156273509 241 + 157873769 TGTTTCGGGCAGCACCTGTCATGTGCTCTGCACACCCTGGTGCTGTAT-GTTTGCGTGTGCGTATCCACA--------------------CCATGCAATCATGCACTGAACAGGGACACAGTTTCCGTTAAGATT---------TCCGTGGGGCT-------CAGCACTGTGAGGGTCAGGGGCGAGCACCGTGGCTCGAGGCCTTA-TCAGGGTGGTTGCACATC--TGCGCTGGAACAGAAGTCTGCAGGCCTCAAAGTCTATT-AAAAAAATCAAAGGA i nomLeu3.chr3 I 2627 C 0 s rheMac3.chr4 168090307 242 + 169853907 TGTTTCGGGCAGCACCTGTCATGTGCTCTGCACACCCTGATACTGTAT-GTTTGTGTGTGCGTATCCACA--------------------CCACGCAATCACACACTGAACAGGAACGCAGTTTACGTTAAGATT---------TTTGTGGAGCT-------CAGCACTATGAGGGTTGGGAGCCAGCACCGTGGCTCAACGCCTTG-TCAGGGTGGTTGCACATC--TGTGCTAGAACAGAATGCTGTGGGCCTCAAAGTCTATTAAAAAAAATCAAAGCA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169046074 242 - 170955103 TGTTTCGGGCAGCACCTGTCATGTGCTCTGCACACCCTGATACTGTAT-GTTTGTGTGTGCGTATCCACA--------------------CCACGCAATCACACACTGAACAGGAACGCAGTTTACGTTAAGATT---------TTTGTGGAGCT-------CAGCACTATGAGGGTTGGGAGCCAGCACCGTGGCTCAACGCCTTG-TCAGGGTGGTTGCACATC--TGTGCTAGAACAGAATGCTGTGGGCCTCAAAGTCTATTAAAAAAAATCAAAGCA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163864108 242 + 165299245 TGTTTCGGGCAGCGCCTGTCATGTGCTCTGCACACCCTGATactgtat-gtttgtgtgtgcgtaTCCACA--------------------CCACGCAATCACGCACTGAACAGGAACACAGTTTACGttaagatt---------tccgtggagct-------caGCACTATGAGGGTTGGGAGCCAGCACCGTGGCTCAACGCCTTG-TCAGGGTGGTTGCACATC--TGTGCTAGAACAGAATGCTGCGGGCCtcaaagtctattaaaaaaaatcaaagca i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96641738 242 + 98384682 TGTTTCGGGCAGCACCTGTCAGGTGCTCTGCACACCCTGATACTGTAT-GTTTGTGTGTGCGTATCCACA--------------------CCACGCAATCATGCACTGAACAGGAACACAGTTTACGTTAAGATT---------TCCCTGGAGCT-------CAGCACTATGAGGGTTGGGAGCCAGCACCGTGGCTCAACGCCTTG-TCAGGGTGGTTGCACATC--TGTGCTAGAACAGAATGCTGCGGGCCTCAAAGTCTATTAAAAAAAATCAAAGCA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169846569 258 + 171630274 TGTTTCAGGCGGCACCTGTCATGTGCTCTGCACACCCTGATGCTGTAT-GTTTGTGTGTGCGTGTCTACAGcacacagtcacacacagtcacacacagtcacacacTGCACAGGAACACGGTTGACTTCAGGAAC---------TCCATGCAGCT-------CAGCACTGTCGGGATCGGGAGCGA--ACCACGACATG-TGCCTTG-TC-GGGTGTCTGCACATCAAAGCGCTCGAACAGAATTCTGCAGGCCTCAAAGGGTAT--AAAAAAATCAAAGGA i calJac3.chr4 I 4162 I 11 s canFam3.chr1 56149862 257 + 122678785 TGTTTCAACCAGCACCTTGCACGTATTTTG-GGGCCCGGATGCTCAGTGGTCTGCGTGGAGGTATTTCCAA-------------------CCATCTGATCTCATGCTGAGCA-GAGTGCCGTTGATTTGAAGGTTCTCAGAAAACCCCTGAGACTGCTGGGGCGGCAACATGAGGATGAGGAGGGAGTCCTG-ATCTTGACACCTGGACCAAGGGAGACACAGATT--GGTGTGACTGCACCACGCAATAGGTCCTGGGGGATAGA-AAAGAAATGAAAGGA i canFam3.chr1 C 0 C 0 a score=460091.000000 s hg38.chr6_KB021644v2_alt 41924 188 + 185823 ATGGAAACTGTTTACCCAAACACGAAAGGGAGGCTTTTATTCACGTGCACCGGCGGAAGCGGCCGGTTTGTTAAACACCTGCCCCTCAGCTGTGGCTGGCCCTTCAGGCAAAGCTCTGCCACTCAAGGTGTTTGGAAAACACTGTCCAGACGAGGCCGTCATGAAACGGCTGCGCAGATGTTCAGCTG s panTro4.chr6 170655236 188 + 172623881 ATGGAAACTGTTTACCCAAACATGAAAGGGAGGCTTTTATTCACGTGCACAGGCGGAAGCGGCCGGTTTGTTAAACACCTGCCCCTCAGCTGTGGCTGGCCCTTCAGGCAAAGCTCTGCCACTCAAGGTGTTTGGAAAACACTGTCCAGACGAGGCCGTCATGAAACGGCTGCGCAGATGTTCAGCTG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172406878 188 + 174210431 ATGGAAACTGTTTACCCAAACATGAAAGGGAGGCTTTTATTCATGTGCACGGGTGGGAGCAGCTGGTTTATTAAACACTTGCCCCTCAGCTGTGGCTCGCCCTTCAGGCAAAACTCTGCCACTCAAGGTGTTTGGAAAACACTGTCCAGACGAGGCCATAATGAAATGGCTGTGCAGATGTTCAGCTG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156273750 186 + 157873769 ATGGAAACTGTTTACCCAAACATGAAAGGGAGGCTTTTATTCACATGCACGG--GGGTGCGGCCGGTTTGTGAAACACCTGCCCCTCAGCTGTGGCTCGCCCTTCAGGCAAAACCCTGCCACTCAAGGTGTTTGGAAAACACTGTCCAGACGAGGCCGTCATGAAACGGCTGTGCAGATGCTCAGCTG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168090549 188 + 169853907 ATGGAAACTGTTTACCCAAACATGAAAGGGAGGCTTTTTTTCATGTGCACGGGCGGGAGCGGCTGGTTTGTTAAACACCTGCCCCTCAGCTGTGGCTCTCCCTTCAGGCAAAACTCCGCCACTCAAGGTGTTTGGAAAACACTGTCCAGACGAGGCTGTCATGAAACGGCTGTGCAGATGTCCCGCTG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169046316 188 - 170955103 ATGGAAACTGTTTACCCAAACATGAAAGGGAGGCTTTTTTTCATGTGCACGGGCGGGAGCGGCTGGTTTGTTAAACACCTGCCCCTCAGCTGTGGCTCTCCCTTCAGGCAAAACTCCGCCACTCAAGGTGTTTGGAAAACACTGTCCAGACGAGGCTGTCATGAAACGGCTGTGCAGATGTCCCGCTG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163864350 188 + 165299245 atggAAACTGTTTACCCAAACATGAAAGGGAGGttttttttCATGTGCACGGGCGGGAGCGACTGGTTTGTTAAACACCTGCCCCTCAGCTGTGGCTCTCCCTTCAGGCAAAACTCCGCCACTCAAGGTGTTTGGAAAACACTGTCCAGACGAGGCTGTCATGAAACGGCTGTGCAGATGTCCCGCTG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96641980 188 + 98384682 ATGGAAACTGTTTACCCAAACATGAAAGGGAGGCTTTTTGTCATGTGCACGGGCGGGAGCGGCTGGTTTGTTAAACACCTGCCCCTCAGCTGTGGCTCTCCCTTCAGGCAAAACTCCCCCACTCAAGGTGTTTGGAAAACACTGTCCAGACGAGGCTGTCATGAAACGGCTGTGCAGCTGTCCCGCTG i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56150119 126 + 122678785 GTGGGAACTGCTCATCCAAACCGGAGAGGGG-----------ATGCGTTTGCTTGGGCGCCGCCGGCC-----AGCACCTGCCC-------------------TCAGGTGCAGCCTTATCTCTCACCGTGTTGGGAACTCAC-----------------CCTGCGACGGCGGCCCAGA---------- i canFam3.chr1 C 0 C 0 e calJac3.chr4 169846827 11 + 171630274 I a score=264284.000000 s hg38.chr6_KB021644v2_alt 42112 105 + 185823 CCTTTTAGCAGAACAG-ATGGATTTTATGATTTACAAAAGTGAAACCTTTCGCTCTCTTGGTG----------------------TTTT------------TTTGTGTGTCCTCTCTTCATCTGGGTGCACACAGGCCCC s panTro4.chr6 170655424 105 + 172623881 CCTTTTAGCAGAACAG-ATGGATTTTATGATTTACAAAAGTGAAACCTTTCGCTCTCTTGGTG----------------------TTTT------------TTTGTGTGTCCTCTCTTCATCTGGGTGCACACAGGCCCC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172407066 104 + 174210431 CCTTTTAGCAGAGCAG-ATGGATTTTATGATTTACAAAAGTCAAACCTTTCGCTCTCTTGGTG-----------------------TTT------------TTTGTGTGTCTTCTCTTCATCTGGGTGCACACAGGCCCC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156273936 105 + 157873769 CCTTTTAGCAGAACAG-ATGGATTTTATGATTTACAAAAGTCAAACCTTTCGCTCTCTCGGTG----------------------TTTT------------TTTGTGTGTCCTCTCTTCATCTGGGTGCACACAGGCCCC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168090737 121 + 169853907 CCTTTTAGCAGAACAG-ACGGTTTTTATGATTTACCAAAGTCAAACCTTTCGCTTTCCTGgtg------tgtgtgtgtgtgtgtgtgtg------------tgtgtgtgtCTTCTCTTCATCTGGGCGCACACAAGCCCC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169046504 133 - 170955103 CCTTTTAGCAGAACAG-ACGGTTTTTATGATTTACCAAAGTCAAACCTTTCGCTTTCCTGgtg------tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtCTTCTCTTCATCTGGGCGCACACAAGCCCC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163864538 126 + 165299245 CCTTTTAGCAGAACAG-AGGGTTTTTATGATTTACCAAAGTCAAACCTTTCGCTTTCCtggtgtgttt-tgtgtgtgtgtgtgtgtgtg------------tgtgtgtgtcttctcttCATCTGGGTGCACACAAGCCCC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96642168 127 + 98384682 CCTTTTAGCAGAACTG-ACAGTTTTTATGGGTTACCAAAGTCAAACCTTTCACTTTCCTGGTGTTTCtgtgtgtgtgtgtgtgtgtgtc------------tgtgtgtgtCTTCTCTTCATCTGGGTGCACACAGGCCCC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169846838 105 + 171630274 CCTTTTAGCAAAACAGAACGGTTTGAAAGGTTTACAAAAGTCAGACCTTCGGCTTTCCTGGTG-----------------------TTC------------TCTTCATGTCCTTTCTTCATCTGGGTGCACAGAGGACCC i calJac3.chr4 I 11 I 463 s canFam3.chr1 56150245 90 + 122678785 CCTCTCAGCAAAACAG-ACCTTTCCCGAGACTTACAG--------------GCCTTTCCAGAG----------------------ACCT------------CTCACGTAATGT-TCTCCGCCCCGGGGCAGCCAGGGCCC i canFam3.chr1 C 0 C 0 a score=3388.000000 s hg38.chr6_KB021644v2_alt 42217 2 + 185823 GG s panTro4.chr6 170655529 2 + 172623881 GG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172407170 2 + 174210431 GG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156274041 2 + 157873769 AG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168090858 2 + 169853907 AG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169046637 2 - 170955103 AG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163864664 2 + 165299245 AG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96642295 2 + 98384682 AG i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56150335 2 + 122678785 TG i canFam3.chr1 C 0 C 0 e calJac3.chr4 169846943 463 + 171630274 I a score=1048850.000000 s hg38.chr6_KB021644v2_alt 42219 361 + 185823 TGA-CACAGGCAATCCCAGAGCCCGCCCACG-GCACCCAGACCGAACACAGCCAGCGATGCCTC--CACACAGCCCAGA--TTAGAATTCTGGTTTCCTGGAATAAAAATCACACATTTCCCCAGGAGCTTCACTCTTATCTCTTCTTTTTCTCCCAGCATCTTTCCAATTTACTCTAATATGGTTACAG-AAATGCG--TCCAGTTCAAAAATATTTTTAA---------AAACCAATCATGAACTCTCTTTAGTGTAAAGTGAAATAAAATTCTGGGTATTAGCTAAACCTTTATTTGACATCTCAAGACATATTAAAGTTGAATTCTTTTTCACTGCTCTAAAATAT-----TGTTTCAATGC----------AAGCAATAGGG-CCCCTAC s panTro4.chr6 170655531 360 + 172623881 TGA-CACAGGCAATCCCAGAGCCCACCCACG-GCACCCAGACCGAACACAGCCAGCGATGCCTC--CACACAGCCCAGA--TTAGAATTCTGGTTTCCTGGAATAAAAATCACACATTTCCCCAGGAGCTTCACTCTTATCTCTTCTTTTTCTCCCAGCATCTTTCCAATTTACTCTAATATGGTTACAG-AAATGTG--TCCAGTTCAAAAATATTTTTAA---------AAACCAATCATGAACTCTCTTTAGTGTAAAGTGAAATAAAATTCTGGGTATTAGCTAAACCTTTATTTGACATCTCAAGACATATTAAAG-TGAATTCTTTTTCACTGCTCCAAAATAT-----TGTTTCAATGC----------AAGCAATAGGG-CCCCTAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172407172 362 + 174210431 TGA-CACAAGCAATCCCAGAGCCCACCCACA-GCACCTAGATCGAACACAGCCAGCGATGCCTC--CACACGGTCCGGA--TTAGAATTCTGGTTTCCTGGAATAAAAATCACACATTTCCCCAGGAGCTTCACTCTTATCTCTTCTTTTTCTCCCAGCATCTTTCCAATTTACTCTAATATGGTTACAGTAAGTGTG--TCCAGTTCAAAAATATTTTTAA---------AAACCAACCATGAACTCTCTTTAGTGTAAAGTGAAATAAAATTCTGGATATTAGCTAAACCTTTATTTGACATCTCAAGACATATTAAGAGTGAATTCTTTTTCACTGCTCTAAAATAT-----TGTTTCAATGC----------AAGCAATAGGG-CCCCTAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156274043 358 + 157873769 TGA-CACAGGCAATCCCACAGCCCACCCATG-GCACCCAGATCAAACACAGCCAGTGATGCCTC--CACACACCGCAGA--TTAGAATTCTGGTTTCCTGGAGTAAAAATCACGCATTTCCCCAGGAGCTTCACTCTTATCTCTTCTTTTTCTCCCAGCATCTTTCCAATTTACTCTAATATGGTTACAG-AAATGTG--TCCAGTTCAAAAATATTTTTAA---------AAACCAACCATGAA--CTCTTTAGTGTAAAGTGAAATAAAATTCTGGATATTAGTTAAACTTTTATTTGACATCTCAAGATATATTAAAG-TGAATTCTTTTTCACTGCTGTAAAATAT-----TGTTTCAATGC----------AAGCAATTGGG-CCCCTAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168090860 371 + 169853907 TGA-CACAGGCAGTCCCAGGGCCCACCCACG-GCACCGAGATCTAACACAGCCAGGAATGCCTC--CACACAGCCCAGA--TTAGAATTCTGGTTAGGTGGAATAAGAATCATGCATTTCCCCAGGACCTTCACTCTCATCTCTTCTTTTTCTCCCAGCATCTTTCCAATTTACTCTAATATGGTTACAGTAAATGCG--TCCAGTTCAAAAATATTTTTAA---------AAACCAACTATGCACTCTCTTTAGTGTAAAGTGAAATAAAATCCTAGATATTAGCTAAACCTTTATTTGACATCTCAAGATATATTAAAG-TGAATTATTTTTCACTGCTCTAAAATAT-----TGTTTCTGTGCTTTCCGCAAGAAGCAATAGGG-CCTCTAC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169046639 371 - 170955103 TGA-CACAGGCAGTCCCAGGGCCCACCCACG-GCACCGAGATCTAACACAGCCAGGAATGCCTC--CACACAGCCCAGA--TTAGAATTCTGGTTAGGTGGAATAAGAATCATGCATTTCCCCAGGACCTTCACTCTCATCTCTTCTTTTTCTCCCAGCATCTTTCCAATTTACTCTAATATCGTTACAGTAAATGCG--TCCAGTTCAAAAATATTTTTAA---------AAACCAACTATGCACTTTCTTTAGTGTAAAGTGAAATAAAATCCTAGATATTAGCTAAACCTTTATTTGACATCTCGAGATATATTAAAG-TGAATTATTTTTCACTGCTCTAAAATAT-----TGTTTCTGTGCTTTCCGCAAGAAGCAATAGGG-CCTCTAC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163864666 373 + 165299245 TGA-CATAGGCAGTCCCAGGGCCCACCCACG-GCACCGAGATCTAACACAGCCAGGAACACCTCCACACACAGCCCAGA--TTAGAATTCTGGTTTGGTGGAATAAAAATCATGCATTTCCCCAGGACCTTCACTctcatctcttctttttctcccagCATCTTTCCAGTTTACTCTAATATGGTTACAGTAAATGTG--Tccagttcaaaaatatttttaa---------aaatcaactatgCACTCTCTTTAgtgtaaagtgaaataaaatcctGGATATTAGCTAAACCTTTATTTGACATCTCAAGACATATTAAAG-TGAATTATTTTTCGCTGCTCTAAAATAT-----TGTTTCTGTGCTTTCTGCAAGAAGCAATAGGG-CCTCTAC i papAnu2.chr4 C 0 I 145 s chlSab2.chr13 96642297 371 + 98384682 TGA-CACAGGCAGTCCCAGAGCCCACCCATG-GCACCGAGATCTGACACAGCCAGGAACGCCTC--CACACAGCCCGGA--TTAGAATTCTGGTTTGGTGGAATAAAAATCACGCTTTTCCCCAGGACCTTCACTCTTATCTCTTCTTTTTCTCCCAGCATCTTTCCAATTTACTCTAATATGGTTACAGTAAATGTG--TCCAGTTCAAAAATATTTTTAA---------AAACCAACTATGCACTCTCTTTAGTGTAAAGTGAAATAAAATCCTGGATATTAGCTAAACCTTTATTTGACATCTCAAGACATATTAAAG-TGAATTATTTTTCACTGCTCTAAAATAT-----TGTTTCTGTGCTTTCCGCAAGAAGCAACAGGG-CCTCTAC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169847406 358 + 171630274 TAA-CACAG-----CCCCAAGCCCACCCACG-GCACCCAGAT-TAACACAGCCAGGGATGCCTC--CACGCAGCCCAGA--TTAGAATTCTGATTTGCTGAAGTAGGAATCACACAGTGCCCCAGGAGCGTCAGTCTTA-CACTTCTTTTTCTCCCAGC-TCTTTCCAGTT-----TAATATGGTTACAGTAAATGTG--TCCAGCTCAAAAAAACGTTTAA---------AGACCAGCCACGATCTCTCTTCAGTGTGAAGGGAAATAACATTCTGGATATTAGTTGAACCTTTATTTGGCATCTCAAGACACATTCAGG-TGAATTCTTTCTCGCTGCTCTAAAATAG-----CATTTCAATGCTTTCTGCAAGAAGCCACAGGG-CCCCTAC i calJac3.chr4 I 463 C 0 s canFam3.chr1 56150337 358 + 122678785 TGAGCACAG-------TTGTGCACATGCTCGTGCATCCAAGT--GGCACAGCTGGTGCAGCCTC-ATGGGCAGCCCGGGCCTGGGGGCTCCTGCGCCGGGGAATTAAGAC--TGCATTTCCCCA------TCAGGCTTA-CTCGTCTTTTCCTC----------TTCCATTGACTGGAATACGGTTATAGTAAATGTGCATCAAATTTAAAAAA-----TAAAAAAAGGAGAAACTAACGAT-TGCTGTCTT-GGTGTGAAGTAAAATGAAATTTTCACTGTTAATTAGAGCCTTTTTGGAAATCTCAAGAGCTGGTTAAG-TGAATTCTTTCTCCCTACCGGGAAACATAAAACAGTTTGAACATTCTTTGCAAGAAGCAATAGGGCCCCCTAC i canFam3.chr1 C 0 C 0 a score=2748697.000000 s hg38.chr6_KB021644v2_alt 42580 976 + 185823 TGTCCTGTTTTAATAA-AGTGATTATTCCAAAGGAATGATCTGCTCTT---GGATGAGAAC-ATTTACATATGGCACTCTTTCTTCCAGGCAGGTA-TTTCCAACTCTGCTGTTTCTAAAAGGTCTCGAGAACTAGAGTGTTGGACGTG--ACTGAGATGGACTGAGAACACATTCTTCCCCTTTAAGTTATTAGATTCTCGGTGGTCCCGGGCA-AGGATTGGGAAACGTTTCATTCAACAGGGATTGAGCC-TGTCGTGCTGTTGAGAGAAACATCAGGTGCATTTCAACATCTTCTCATGGAATTTCTGGCCATCA----------ATCACTGCAGGACTGTAGGAGGGACCCTGGGGCCCG-GGCAGTTCATGAC-ACGGCCTGGAGGGAAGCA------TACCGGCCATGGCCTGAGTCCCAGAGCAGGACGGAGGCTGCGCCTGTCAGGGGGGCTT-GCCAGCCTGCAGAGTGTAGACAT-CGTGTAAATGTCAAGGAGTGTCACAGGACAAGCGTGTTGCTGAGAGAAGGTGTCCTgtgcgaggtgtgcaggggtg-at---aggtgttgaggatgctgagtccagagggcagaggCCTGGGGCGGTGGGCACGTCACCAGCAGAGAGGCCGCTGGAGACCACAGAGGAAGTCGAACCC-AGGGGACAGAGCTGTGTCCCAGAATGAGCTGACGGTCTCCATGGCTGCTTAGGTAGAGATGACAAGGGGGAAAGAGAAAGAGGCTTGGCAGTTTCTGTCCCAGGAAGA-GGATGGTTCCACTAAAAGTAGAAGGCCCTGGCCCGCTGGGGCTTTCTCAGGGGCTGGAGGGGAATGCGAGGAGCTTGATGTTAGACACGGC-----------GGCAAAGC-TAATGTAGGTGGAGATGCACCTCTCTAGATGGACAGCTGGCAATTTGCT---------GGGGCGTGGACGTCACGTTGAGTCCATTGAGACGCAGGCCTGC--AGGGAAGAGAAGTCGGGTCAGGGCGTTCTG-----CTCAGAGGCCTGAGG s panTro4.chr6 170655891 977 + 172623881 TGTCCTGTTTTAATAA-AGTGATTATTCCAAAGGAATGATCTGCTCTT---GGATGAGAAC-ATTTACATATGGCACTCTTTCTTCCAGGCAGGTA-TTTCCAACTCTGCTGTTTCTAAAAGGTCTGGAGAACTAGAGTGTTGGACGTG--ACTGAGATGGACTGAGAACACATTCTTCCCCTTTAAGTTATTAGATTCTCGGTGGTCCCGGGCA-AGGATTGGGAAACATTTCATTCAACAGGGATCGAGCC-TGTCATGCTGTTGAGAGAAACATCAGGTGCATTTCAACATCTTCTCATGGAATTTCTGGCCATCA----------ATCACTGCAGGACTGTAGGAGGGACCCTGGGGCCCG-GGCAGTTCATGAC-ATGGCCTGGAGGGAAGCA------TACCGGCCATGGCTTGGGTCCCAGAGCAGGACGGAGGCTGGGCCTGTCAGGGGGGCTTGGGCAGCTTGCAGAGTGTAGACAT-CGTGTAAATGTCAAGGAGTGTCACAGGACAAGCGTGTTGCTGAGAGAAGGTGTCCTGTGCGAGGTGTGCAGCGGTG-AT---AGGTGTTGAGGATGCTGAGTCCAGAGGGCAGAGGCCTGGGGCGGTGGGCACGTCACCAGCAGAGAGGCCGCTGGAGACCACAGATGAAGTCGAACCC-AGGGGACAGAGCTGTGTCCAAGAATGCGCTGACGGTCTCCATGGCTGCTTAGGTAGAGATGACAAGGGGGAAAGAGAAAGAGGCTTGGCAGTTTCTGTCCCAGGAAGA-GGATGGTTCCACTAAAAGTACAAGGCCCTGGCCCGCTGGGGCTTTCTCAGGGGCTGGAGGGGAATGCGAGGAGCTTGATGTTAGACACGGC-----------GGCAAAGC-TAATGTAGGTGGAGATGCACCTCTCTAGATGGACAGCTGGCAATTTGCT---------GGGGCGTGGACGTCATGTTGAGTCCATTGAGACGCAGCCCTGC--AGGGAAGAGAAGTCGGGTCAGGGCGTTCTG-----CTCAGAGGCCTGAGG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172407534 985 + 174210431 TGTCCTGTTTTAATAA-AGTGATTATTCCAAAGGAATGATCTGCTCTT---AGATGAGAAC-ATTTACATATGGCACTCTTTCTTCCAGGCAGATA-TTTCCAACTCTGCTGTTTCTAAAAGGTGTCGAGAACTAGAGTGTTGGATGTA--ACTGAGATGGACTGAGAACACATTATTCCCCTTTAAGTTATTAGATTCTCGGTGGTCCCTGGCA-AGGATTGGGAAACATTTCATTCAACAGGGATTGAGCC-TGTCGTGCTGTTGAAAGAAACATCAGGTGCATTTCAACATCTTCTCATGGAATTTCTGGCCATCA----------ATCACTGCAGGACTGTAGGAGGGACCCTGGGGCCCA-GGCAGTTCATGAC-ATGGCCTGGAGAGAAGCA------CACCGGCCATGGCTTGGGTCCCAGAGCAGGATGGATGCTGCGCCTGTCAGGGGGGCTTGGGCAGCTTGTAGAGTGT-GACAT-CGTGTAAATGTCAAGGAGTGTCACAGGACAAGCATGTTACTGAGAGAAGGTGTTCTGTGTGAGGCGTGCAGGGGTG-AT---AGGTGTTGAGGATGCTGAGTCCAGAGGGCAGAGGCCTGGGGCGGTGGGCACGTCACCAGCAGAGAGGCCGCTGGAGACCACAGAGGAAGTCGAACCC-AGGGGACAGAGCTGTGTCCAAGAACGAGTTGATGGTCTCCATGGCTGCTTAGGTAGAGATGACCAGGGGGAAAGAGAAAGAGGCTTGGCAGTTTCTGTCCCAGTAAGA-GGATGGTTCCACTAAAAGTAGAAGGTCCTGACCCACTGGGGCTTTCTCAGGGGTTGGAGGGGAATGCGAGGAGCTTGGTGTTAGACATGGC-----------AGCAAAGC-TAATGCAGGTGGAGATGCACCTCTCTAGATGGACGGCTGGCAATTTGCTGCGATGTCGGGGGTGTGGATGTCATGTCGAGTCCACTGAGATGCAGGCCTGC--AGGGAAGAGAAGTCGGGTCAGAGCGTTCTG-----CTCAGAGGCCTGAGG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156274401 990 + 157873769 ACTCCTGTTTTAATAA-AGTGATTATTCCAAAGGAATGATCTGCTCTT---AGATGAGAACAATTTACACACGGCACTCTTTCTTCCAGGCAGATA-TTTCCAACTCTGCTGTTTCTAAAAGGTCTCGAGAACT--AGTGTTGGACGTG--ACTGAGATGGTCTGAGAACACATTCTTCCCGTTCAAGTTATTAGATTCTCGGTGGTCCCTGGCA-AGGATTGGGAAACATTTCATTCAACAGGGACTGAGCCAGGTCGTGCTGTTGAGAGAAACATCAGGTGCATTTCAACATCTTCTCCTGGAATTTCTGGCCATCA----------ATCACTGCAGGACTGTAGGAGGGACCCTGGGGCCCG-GGCAGTTCATGAC-ACGGCCTGGAGGGAAGCG------CACTGGCCATGGCTTGGGTCCCAGAGCAGGACGGAGGCTGCGCCTGTCAGGAGGGCTTGGGCAGCTTGCAGAGTGGAGACATCCGTGTAAATGTCAAGGAGCGTCACAGAACAAGCGTGTTGCTGAGAGAAGGTGTTCTGTGCGAGGCATGCAGGGGTG-ATGACAGGTGTTGAGGATGCTGAGTCCAGAGGGCAGAGGCCTGGGGTGGTGGGCACGTCACCAGCAGAGAGGCCGCTGGAGACCACAGAGGAGGTCGAACCC-AGGGGACAGAGCTGTGTCCAAGAACGAGTTGATAGTCTCCATGGCTGCTTAGGTAGAGATGACAAGGGGGACAGAGAAAGAGGCTTGGCAGTTTCTGTCCCAGGAGGA-GGATGGTTCCACTAAAAGTAGAAGGCCCTGGCCTGCTGGGGCTTTCTTAGGGGCTGGAGGGGAATACAAGGAGCTTGATGTTAGACACAGC-----------GGCAAAGC-TAATGTAGGTGGAGATGCACCTCTCTAGATGGACAGCCGGCAGTTTGCTGGGACGTCAGGGGCGTGGACGTCATGTTGAGTCCACTGAGACGCAGGCCTGC--AGGGAAGAGAAGTCGGGTCAGGGCGTTCTG-----CTCAGAGGCCTGAGC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168091231 981 + 169853907 TGTCCCGTTTTAATAA-AGTGATTATTGCAAAGGAATGATCTGCTCTT---AGATGAGAACTACTTACAGATGGCACTCTTTCTTCCAGGCAGATA-TTTCCAACTCTGCTGTTTCTACAAGGTAACGAGAACTAGAGTGTTGGACGTG--ACTGAGATGCACTGAGAACACATTCTTCCTCTTGAAGTTATTAGATTCTCGGTGGTCCCTGGCA-AGGATTGGAAAACATTTCATTCAACAGGGATTGAGCCTGGTCGTGCCGTTGAAAGAAACATCAGGTGCATTTCAACATCTTCTCATGGAATTTCTGGCCATCA----------ATCACTGCAGGACTATAGGACCGACCCTGGGG-CTG-GGCAGTTCATGAC-ACGGCCTGGAGGGAAGCG------CACTGGTCATGGCTTGGGTCCCAGAGCAGGACAGAGGCTGCACCTGTCAGGAGGGCTTGGGCAGCTCGCAGAGTGTAGACATCTGTGTAAATGTTAAGAAGCGTCACAGGACAAGTGTGTTGCTGAGAGAAGGTGTTCTGTGAGAGGCGTGCAGGGGTGAAT---AGGTGTTGAGGATGCTGAGTCCAGAGGGCAGAGGCCTGGGGCAGTGGGCACGTCACTAGCAGAGAGGCTGCTGGAGACCACAGAGGAAGATGAACCC-AGGAGACA---CTGTGTCCAAGAACAAGCTGATGGTCTCCATGGCTGCTTAGGTAGAGATGACAAGGGGGAAAGAGAAAGAGGCTTGGTAGTTTCTGTCCCAGAAAGA-GGATGGTTCCACTAAAAGTAGAAGGCCCTGGCCCGCTGGGGCTTTCTCAGGGGTTGGAGGGGAATGCGAGGAGCTTGATATTAGACACGGCAAGTTCTAGGTGGCAAAGC-TAATGTAGGCGGAGATGCACCTCTCTAGATGGACAGCCGGCAATTTGCTGGGACGTCAGGGGC----------------GTCCACTGAGACGCAGTCCTGC--AGGGAAGAGGGGTCGAGTCAGGGGGCTCTG-----CTCAGAGGCCTGAGG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169047010 981 - 170955103 TGTCCCGTTTTAATAA-AGTGATTATTGCAAAGGAATGATCTGCTCTT---AGATGAGAACTACTTACAGATGGCACTCTTTCTTCCAGGCAGATA-TTTCCAACTCTGCTGTTTCTACAAGGTAACGAGAACTAGAGTGTTGGACGTG--ACTGAGATGCACTGAGAACACATTCTTCCTCTTGAAGTTATTAGATTCTCGGTGGTCCCTGGCA-AGGATTGGAAAACATTTCATTCAACAGGGATTGAGCCTGGTCGTGCCGTTGAAAGAAACATCAGGTGCATTTCAACATCTTCTCATGGAATTTCTGGCCATCA----------ATCACTGCAGGACTATAGGACCGACCCTGGGG-CTG-GGCAGTTCATGAC-ACGGCCTGGAGGGAAGCG------CACTGGTCATGGCTTGGGTCCCAGAGCAGGACAGAGGCTGCACCTGTCAGGAGGGCTTGGGCAGCTCGCAGAGTGTAGACATCTGTGTAAATGTTAAGAAGCGTCACAGGACAAGTGTGTTGCTGAGAGAAGGTGTTCTGTGAGAGGCgtgcaggggtgaat---aggtgttgaggatgctgagtccagagggcagaggCCTGGGGCAGTGGGCACGTCACTAGCAGAGAGGCTGCTGGAGACCACAGAGGAAGATGAACCC-AGGAGACA---CTGTGTCCAAGAACAAGCTGATGGTCTCCATGGCTGCTTAGGTAGAGATGACAAGGGGGAAAGAGAAAGAGGCTTGGTAGTTTCTGTCCCAGAAAGA-GGATGGTTCCACTAAAAGTAGAAGGCCCTGGCCCGCTGGGGCTTTCTCAGGGGTTGGAGGGGAATGCGAGGAGCTTGATATTAGACACGGCAAGTTCTAGGTGGCAAAGC-TAATGTAGGCGGAGATGCACCTCTCTAGATGGACAGCCGGCAATTTGCTGGGACGTCAGGGGC----------------GTCCACTGAGACGCAGTCCTGC--AGGGAAGAGGAGTCGAGTCAGGGGGCTCTG-----CTCAGAGGCCTGAGG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163865184 999 + 165299245 tGTCCCATTTTAATAA-AGTGATTATTGCACAGGAATGATCTGCTCTT---AGATGAGAACTGTTTACAGATGGCACTCTTTCTTCCAGGCAGATA-TCTCCAACTCTGCTGTTTCTACAAGGTAATGAGAACTAGAGTGTTGGACGTG--ACTGAGATGGACTGAGAACACATTCTTCCTCTTGAAGTTATTAGATTCTCGGTGGTCCCTGGCA-AGGATTGGGAAACATTTCATTCAACAGGGATTGAACCTGGTCGTGCTGTTGAAAGAAACATTAGGTGCATTTCAACATCTTCTCATGGAATTTCTGGCCGTCA----------ATCACTGCAGGACTGTAGGACTGACCCTGGGG-CCG-GGCAGTTCA-GAC-ACGGCCTGGAGGGAAGCA------CGCTGGCCATGGCTTGGGTCCCAGAGCAGGACGGAGGCTGCACCTGTCAGCAGGGCTTGGGCAGCTCTCAGAGTGTAGACATCTGTGTAAATGTTAAGAAGCATCACAGGACAAGTGTGTTGCTGAGAGAAGGTGTTCTGTGAGAGGCGTGCAGGGGTGAAT---AGATGTTGAGGATGCTGAGTCCAGAGGGCAGAGGCCTGGGGCGGTGGGCACATCACTAGCAGAGAGGCTGCTGGAGACCACAGAGGAAGTCGAACCC-AGGGGACACAGCCGTGTCCAAGAACAGGCTGATGGTCTCCATGGCTGCTTAGGTAGAGATGACaagggggaaagagaaagaggcttggTAGTTTCTGTCCCAGGAAGA-GGATGGTTCCACTAAAAGTAGAAGGCCCTGGCCCGCTGGGGCTTTCTCAGGGGTGGGAGGGGAATGCGAGGAGCTTGATATTAGACACGGCAAGTTCTAGGTGGCAAAGC-TAATGTAGGTGGAGATGCACCTCTCTAGATGGACAGCCGGCAATTTGCTGGGACGTCAGGGGCGTGGACGTCATGTTGAGTCCACTGAGACGCAGTCCTGC--AGGGAAGAGGAGTCGAGTCAGGGCGTTCTG-----CTCAGAGacctgagg i papAnu2.chr4 I 145 C 0 s chlSab2.chr13 96642668 1000 + 98384682 TGTCCCGTTTTAGTAA-AGTGATTATTGCACAGGAATGATCTGCTCTT---AGATGAGAACTACTTACAGATGGCACTCTTTCTTCCAGGCAGATA-TTTCCAACTCTGCTGTTTCTACAAGGTAACGAGAACTAGGGTGTTGGACGTG--ACTAAGAAGGACTGAGAACACATTCTTCCTCTTGAAGTTATTAGGTTCTCGGTGGTCCCTGGCA-AGGATTGGGAAACATTTCATTCAACAGGGATTGAGCCTGGTCATGCTGTTGAAAGAAACATCAGGTGCATTTCAACATCTTCTCATGGAATTTCTGGCCGACA----------ATCACTGCAGGACTGTAGGACCGACCCTGGGG-CTG-GGCAGTTCATGAC-ACGGCCTGGAGGGAAGCG------CGCTGGCCATGGCTTGGGACCCGGAGCAGGACGGAGGCTGCACCTTTCAGGAAGGCTTGGGCAGCTCGCAGAGTGTAGACATCTGTGTAAATGTCAAGAAGCGTCACAGGACAAGCGTGTTGCTGAGAGAAGGTGTTCTGTGAGAGGCGTGCAGGGGTGAAT---AGGTGTTGAGGATGCTGAGTCCAGAGGACAGAGGCCTGGGGCGGTGGGCACGTCACCAGCAGACAGGCTGCTGGAAACCACAGAGGAAGTCGAACCC-AGGGGACACAGCCGTGTCCAAGAACAAGCTGATGGTCTCCATGGCTGCTTAGGTAGAGAAAATAAGGGGGGAAGAGAAAGAGGCTTGGTAGTTTCTGTCCCAGGAAGA-GGATGGTTCCCCTAAAAGTAGAAGGCCCTGGCCCGCTGGGGCTTTCTCAGGGGTTGGAGGGGAATGGGAGGAGCTTGGTATCAGACACGGCAAGTTCTAGGTGGCAAAGC-TAATGTAGGCAGAGATGCACCTCTCTAGTTGGACAGCTGCCAATTTGCTGGGACGTCAGGGGCGTGGAAGTCATGTTGAGTCCACTGAGACGCAGTCCTGC--AGGGAAGAGGAGTCGAGTCAGGGGGCTCTG-----CTCAGAGGCCTGAGG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169847764 953 + 171630274 TGTCCAGCTTCAATAA-AGCGATTATTCCAAAGGAACGG-CTGCTCTT---GGCTGAAAACTGCTCACATGTGGTGCTCTTTCTTCCAGGCATCTATTTTTTAACTCTGCTGTTTTCACAAGGTCACGGCAATGAGAGTGTTGGATGTGGCGCTGAGGTGGCCCAAGAACACATTCTTCCTCTTGAAGTTATTAGATTCTTGGGGGTCCCTGGCA-AGGATTGGGAAACCTTTCATTCACCAGGGATTGAGCCTGGCTGTGCTGTTGAAAGAAACATCAGGTGCATTTCAACATCTTCTCATGGAATTTCTGGCAATCA----------ATCACTGCAGGACGGTAGGAGGGATCT--GGGCCCG-GGCAGCTCATGAC-CCAGCCTGGAGGGAAGC---------TGGGCCATGGCTTGTGGCCCAGAGCAGGA--------------------------------------AGAGGGTAGAAATCCGTGTGAATGTCAAGGAGCACCATGGGACAAGCGTGTTGCT--GAGAAGGTGTTCTGTGCAAGGTGTACAGGGATG-GC---GACTGTTGAGGATGCTGAGTGCAGAGCGCAGAGGCCTGGGGTGCTGGGCACATCACCAGCAGAGAGGCCGCTGGAGCCCACAGAGGAAGGGAAACCT-GGTGGACAGAGCTGTGTCCGAGAATGAGCTGATGGTGCCCACCGCTGCTTAGGTAGCGATGACAAGGGGGAAGGAGAAGGAGGCTTCACAGCTTCTGCCCCAGGAAGA-AGATGGTTCCCCGAAGAGTAGAAGGCCCTCGTCC-CTGGGGCTTGCTCAAGGGCTGGAGGGGAATGTGAGGAGC-TGATGTTAGGCAGGAAGAGCCCCCGG-GGTTAAGC-TAATGTATGTGGAGGTGCACCTCTCTAGACCGACAGCCAGTGGTTCACTGGGATGTCAGGGACACGGACGTCCTGTTGAGT-CACTGAGACACAGGTCTGC--AGGGAAGAGAAGTCCGGTCAGGGTGATCTG-----CTCGGAGGCCTGAAG i calJac3.chr4 C 0 C 0 s canFam3.chr1 56150695 811 + 122678785 CGCCCAGTTTCAACAGCAGTGACCCTTTC-TGGGAAAGATCTGCTCTTTTGAGTCAAGAATGACCT-----------------TTCCAGGAGAGCT-TTGTTAACCGTGCCATTTCCA--------CGGTGACCACAGTGCTGGATTTG---------------------------TTCCTCTGGATTGTGTTGGATTCTATGTGGCCCCCGGCACAGGGCTGGGACCCATCTCATTTGAGGCGGACACAGGCTCGCGATGAC------------------TGCATAT----------TCACCGATGAGCTGACTGTCATCACCAGGTCATCACCGGGTCACTGGAGGGGGCACCCAGGGCCCCGTGGC--CTCATGATGGCAGGTGTTAGGAAAGTGTGGGACTGACGCCAAGGGCCTGTGTCCCCGCAGTGGGAGGACGCCG---CTGTCAGAAGTCACC--GCCGACTGCAGAACAGAGAAACCCCTGTAACATTCAAGGTAAGTTGTAGGACAAG-GTGCCTCCCTGAGAGAGCCGTCTGCG-GGGTCCTGCAGA-----GC---AGGCAGCGAGAA--------CCAACGTCCTGAGGCC----------------------------------------ACCACAGAGGGAAGGGCACCCGAGCAGACCCAGAGCCACCCCAGAGCAAGCTGGT-GTGTATCTGATCACCCAGATGGAGGACAGAAAAGGGGAAGAGA----------GCATTTCTACTTTCATGAGCATGGAGGGTTT---------------GCTCT---------GGGCTTGATTGAGGGCTGGGAGGAAGCACAAGAGGCTGGATCCTGGAC-TGACCTTATTTAGGTGCCAGTGCTTAGCATGCGCACAGGGGCACATCT-------------------GTCACT---------GAGCTGTGGACG------------------GACACAAGCTTGCCGAGGGGAGGGCTGTGCTGTCAGGCTGTTCTGGGGCATTTGGGGGCCTGTGG i canFam3.chr1 C 0 I 409 a score=169022.000000 s hg38.chr6_KB021644v2_alt 43556 73 + 185823 TGGGGAGG-AAGGG--------GCATGGAAGGAAATGCTGGAGGTTGGAGAGTGAGTCAGGAGGAGGTTGTCTTGGGGAGCA s panTro4.chr6 170656868 62 + 172623881 TGGGGA--------------------GGAAGGAAGTGCTGGAGGCTGGAGAGTGAGTCGGGAGGAGGTTGTCTTGGGGAGCA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172408519 74 + 174210431 TGGGGAGGAAAGGG--------ACATGGAAGGAAACGCTGGAGGCTGGAGAGTGAGTCAGGAGGAGGTTGTCTTGGGGAGCA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156275391 73 + 157873769 GGGGGAGG-AAGGG--------GCCTGGAAAGAAACGCTGGAGGCTGCAGAGTGAGTAAGGAGGAGGTTGTCTTGGGGAGCA i nomLeu3.chr3 C 0 I 45 s rheMac3.chr4 168092212 81 + 169853907 TGGGGAGG-AAGGGGGCTTCCAGCATGGAAGGAAACGCTGGAGGCTGGAGAGTGAGTCAGGAGGAGGTTGTCCTGGGGAGCG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169047991 81 - 170955103 TGGGGAGG-AAGGGGGCTTCCAGCATGGAAGGAAACGCTGGAGGCTGGAGAGTGAGTCAGGAGGAGGTTGTCTTGGGGGGCG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163866183 81 + 165299245 tggggagg-aagggggcTTCCAGCATGGAAGGAAACGCTGGAGGCTGGAGAGTGAGTCAGGAGGAGGTTGTCTGGGGGAGTG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96643668 80 + 98384682 T-GGGAGG-AAGGGGGCTTCCAGCATGGAAGGAAACGCTGGAGGCTGGAGAGTGAGTCAGGAGGAGGTTGTCTTGGGGAGTG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169848717 66 + 171630274 TGGGGAGG-AAAGGGGCTTCCAGGAGGGAATGAAAAGCTAGA-GCTGCAGAGCGAGGCAAGAAGAGGT-------------- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56151506 409 + 122678785 I a score=28373.000000 s hg38.chr6_KB021644v2_alt 43629 18 + 185823 GTCACGGGGCCACAGGCA s ponAbe2.chr6 172408593 18 + 174210431 GTCACGGGGCCACAGGCA i ponAbe2.chr6 C 0 I 175 s nomLeu3.chr3 156275509 18 + 157873769 GTCACGGAGCCACAGGGG i nomLeu3.chr3 I 45 C 0 s rheMac3.chr4 168092293 18 + 169853907 GTCACAGGGCCACAGGCA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169048072 18 - 170955103 GTCACAGGGCCACAGGCA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163866264 18 + 165299245 GTCACAGGGCCACAGGCA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96643748 18 + 98384682 GTCACAGGGCCACAGGCA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169848783 4 + 171630274 -------GGCT------- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56151506 409 + 122678785 I e panTro4.chr6 170656930 0 + 172623881 C a score=92650.000000 s hg38.chr6_KB021644v2_alt 43647 52 + 185823 T---------------------------------------------CTGAGATGGGGAGCGGAGATGGGAGCGGTCACGGGGCCACAGGCATCTGAG s ponAbe2.chr6 172408786 52 + 174210431 T---------------------------------------------CTGAGATGGGGAGCGGCGAGGGGAGCGGTCACAGGGCCACACGCGTCTGAG i ponAbe2.chr6 I 175 C 0 s nomLeu3.chr3 156275527 52 + 157873769 T---------------------------------------------CTGAGATGGGGAGTGGAAAGGGGAGCAGTCACGGGGCCACACGCGTCTGAG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168092311 97 + 169853907 TCTGAGATGGGAATGGAGAGGGGAATGGTCACGGGGTCACAGCCGCCTGAGATGGGGAGTGGAGAGGGGAGCGGTCACGGGGACACACGCATCTGAG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169048090 97 - 170955103 TCTGAGATGGGAATGGAGAGGGGAATGGTCACGGGGTCACACCCGCCTGAGATGGGGAGTGGAGAGGGGAGCGGTCACGGGGACACACGCATCTGAG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163866282 52 + 165299245 T---------------------------------------------CTGAGATGGGGAGTGGAGAGGGGAATGGTCACAGGGCCACAGGCATCTGAG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96643766 52 + 98384682 T---------------------------------------------CTGAGATGGGGAGTGGAGAGGGGAGCGGTCACAGGGCCACAGGCATCTGAG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169848787 44 + 171630274 ----------------------------------------------------TGGGGAGCGGAGAGGGG-GCGGTCGCAGGGCCACATGTGTCTGAG i calJac3.chr4 C 0 I 102 e canFam3.chr1 56151506 409 + 122678785 I e panTro4.chr6 170656930 0 + 172623881 C a score=183161.000000 s hg38.chr6_KB021644v2_alt 43699 114 + 185823 ATGGGAAGTGGAGAGCGGAGCACTCACAGGGCCACAGGCATCTGAGATGGGGAGTGGAGAGGGGAGCGGTCACGGGGCCACAGGCGTCTGAGATGGGGAGTGGAGAGGGGAACG s ponAbe2.chr6 172408838 114 + 174210431 ATGAGGAGTGGCGAGGGGAGTGGTCACAGGGCCACACGTGTCTGAGATGGGGAGCGGCGAGGGTAGCAGTCACGGGGCCACACGCGTCTGAGATGGGGAGCGGCGAGGGGAGCG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156275579 114 + 157873769 ATGGGGAGCAGTGAGGGGAGCAGTCACAGGGCCACACGGGTCTGAGATGGGGAGTGGAGAGGGGAGTGGTCACAGGGCCACACGCGTCTGAGATGGGGAGTGGAGAGGGGAGCG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168092408 114 + 169853907 GTGGGGAGTGGAGAAGGGAAGGGTCACGGGGTCACATGCGTCTCAGATGGGGAGTGGAGAGGGGAGTGGTCACAGGGCCACAGGCATCTGAGGTGGGGAGTGGAGAGGGGAGCG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169048187 114 - 170955103 GTGGGGAGTGGAGAAGGGAAGGGTCACGGGGTCACATGCGTCTCAGATGGGGAGTGGAGAGGGGAGTGGTCACAGGGCCACAGGCATCTGAGGTGGGGAGTGGAGAGGGGAGCG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163866334 114 + 165299245 ATGGGGAGTGGAGAGGGGAGCGGTCACGGGGTCACACCCGTCTGAGAtggggagtggagaggggagtggtcacggggacacacgcgtctgaggtggggagtggagaggggagCG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96643818 114 + 98384682 ATGGGGAGTGGAGAGGGGAGCGGTCACAGGGTCACATCCATCTGAGATGGGGAGTGGAGAGGGGAGCGGTCACGGGGTCACACCCGTCTGAGATGGGGAGTGCAGAGGGGAGCG i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169848831 102 + 171630274 I e canFam3.chr1 56151506 409 + 122678785 I e panTro4.chr6 170656930 0 + 172623881 C a score=-21234.000000 s hg38.chr6_KB021644v2_alt 43813 6 + 185823 GTCAC----------------------------------------------------------------------------------------------G s panTro4.chr6 170656930 6 + 172623881 GTCAC----------------------------------------------------------------------------------------------G i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172408952 6 + 174210431 GTCAC----------------------------------------------------------------------------------------------A i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156275693 6 + 157873769 GTCAC----------------------------------------------------------------------------------------------A i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168092522 5 + 169853907 GTCAA----------------------------------------------------------------------------------------------- i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169048301 5 - 170955103 GTCAA----------------------------------------------------------------------------------------------- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163866448 6 + 165299245 GTCACG---------------------------------------------------------------------------------------------- i papAnu2.chr4 C 0 I 136 s chlSab2.chr13 96643932 98 + 98384682 GTCAC-AGGGTCACATCCGTCTGAGGTGGGGAGTGGAGAGGGGAGCGGTCACGGGGACACACGCGTCTGAAGTGAGGAGTGGAGAGGGGAAGGGTCACG- i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169848831 102 + 171630274 I e canFam3.chr1 56151506 409 + 122678785 I a score=39526.000000 s hg38.chr6_KB021644v2_alt 43819 19 + 185823 GGGCCACAGGCGTCTGAGA s panTro4.chr6 170656936 19 + 172623881 GGGCCGCAGGCGTCTGAGA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172408958 19 + 174210431 GGGCCACACGTGTCTGAGA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156275699 19 + 157873769 GGGCCACAGGGGTCTAAGA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168092527 19 + 169853907 GCGCCACAGGTGTCTGAGA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169048306 19 - 170955103 GCGCCACAGGTGTCTGAGA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163866590 19 + 165299245 GGGCCACAGGTATCTGAGA i papAnu2.chr4 I 136 C 0 s chlSab2.chr13 96644030 19 + 98384682 GGGTCACACGCGTCTGAGA i chlSab2.chr13 C 0 I 160 e calJac3.chr4 169848831 102 + 171630274 I e canFam3.chr1 56151506 409 + 122678785 I a score=13559.000000 s hg38.chr6_KB021644v2_alt 43838 10 + 185823 GACGGGGGAG s panTro4.chr6 170656955 10 + 172623881 GACGGGGGAG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172408977 7 + 174210431 ---TGGGGAG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156275718 7 + 157873769 ---TGGGGAG i nomLeu3.chr3 C 0 I 200 s rheMac3.chr4 168092546 10 + 169853907 GATGGGGGAG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169048325 10 - 170955103 GATGGGGGAG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163866609 10 + 165299245 GATGGGGGAG i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169848831 102 + 171630274 I e canFam3.chr1 56151506 409 + 122678785 I e chlSab2.chr13 96644049 160 + 98384682 I a score=16671.000000 s hg38.chr6_KB021644v2_alt 43848 14 + 185823 CACGAGGCCCAAGA s panTro4.chr6 170656965 14 + 172623881 CACGAGGCCCGAGA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172408984 14 + 174210431 CACAAGGCCCGAGA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156275925 14 + 157873769 CACGAGGCCTGAGA i nomLeu3.chr3 I 200 C 0 s rheMac3.chr4 168092556 13 + 169853907 CACGAGCCCTGAG- i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169048335 13 - 170955103 CACGAGCCCTGAG- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163866619 13 + 165299245 CACGAGGCCTGAG- i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169848831 102 + 171630274 I e canFam3.chr1 56151506 409 + 122678785 I e chlSab2.chr13 96644049 160 + 98384682 I a score=188115.000000 s hg38.chr6_KB021644v2_alt 43862 83 + 185823 AGGCCGATGGGTTTAGGGTGGGAGGAGCTCCCTCTGGAGATCAGTGTTTCCACAAGGTGGTAGGGGCGGAGGAAGCAGGATGG s panTro4.chr6 170656979 83 + 172623881 AGGCCGACGGGTTTAGGGTGCGAGGAGCTCCCTCTGGAGATCAGTGTTTCCACAAGGTGGTAGGGGTGGAGGAGGCAGGATGG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172408998 83 + 174210431 AGGCCGACGGGTTTAGGGTGCAAGGAGTTCCCTCCAGAGATCAGTATTTCCACAAGGTGGTAGGGGCAGAGGAAGCAGGATGG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156275939 83 + 157873769 AGGCCGACGGGTTTAGGGTGCAAGGAGTTCCCTCGGGAGATCAGTGTTTCCACGGGGTGGTAAGGGCGGAGGAAGCAGAATGG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168092569 83 + 169853907 AGGCCAATGGGTTTAGGGTGCAAGGAGTTCCCTCGGGAGCTCAGTGTTTCCACCGGGTGGTAGAGGCGGAGGAAACAGGGTGG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169048348 83 - 170955103 AGGCCAATGGGTTTAGGGTGCAAGGAGTTCCCTCGGGAGCTCAGTGTTTCCACCGGGTGGTAGAGGCGGAGGAAACAGGGTGG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163866632 83 + 165299245 AGGCCGATGGGTTTAGGGTGCAAGGAGTTCCCTTGGGAGCTCAGTGTTTCCACCGGGTGGTAGAGGCGGAGGAAAGAGGGTGG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96644209 83 + 98384682 AGGCCGATGGGTTTAGGGTGCAAGGAGTTCCCTCGGGAGCTCAGTGTTTCCACCGGGTGGTAGAGGTGGAGGAAACAGGGTGG i chlSab2.chr13 I 160 I 4 e calJac3.chr4 169848831 102 + 171630274 I e canFam3.chr1 56151506 409 + 122678785 I a score=700.000000 s hg38.chr6_KB021644v2_alt 43945 1 + 185823 G s panTro4.chr6 170657062 1 + 172623881 G i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172409081 1 + 174210431 A i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156276022 1 + 157873769 A i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168092652 1 + 169853907 A i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169048431 1 - 170955103 A i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163866715 1 + 165299245 A i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169848831 102 + 171630274 I e canFam3.chr1 56151506 409 + 122678785 I e chlSab2.chr13 96644292 4 + 98384682 I a score=846.000000 s hg38.chr6_KB021644v2_alt 43946 3 + 185823 TGC s panTro4.chr6 170657063 3 + 172623881 TGC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172409082 3 + 174210431 TGG i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168092653 3 + 169853907 TGG i rheMac3.chr4 C 0 C 0 e calJac3.chr4 169848831 102 + 171630274 I e canFam3.chr1 56151506 409 + 122678785 I e chlSab2.chr13 96644292 4 + 98384682 I e papAnu2.chr4 163866716 0 + 165299245 C e nomLeu3.chr3 156276023 0 + 157873769 C e macFas5.chr4 169048432 0 - 170955103 C a score=0.000000 s hg38.chr6_KB021644v2_alt 43949 31409 + 185823 Tgatgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggaagcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgcggacgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggacagggtgctgatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggtgctgatgaggacgcggtgctgatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcagtgctgatgcagtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgcgatgctgatgcggtgctgatgcggatgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgcggatgcgatgctgatgcggacccggtgctgatgcggacccggtgctgatgcggatccggtgctgatgcggatgcggtgctgatgcggacccggtgctgatgaggacgcggtgctgatgcggatgcggtgctgatgcggatgcggtgctgatgcggatgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgcggatgcggtgctgatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgcggacgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgagggatgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgaatgaggatgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggatgccggtgctgatgaggacgcggtgctgatgagggacgccgttgctgatgaggatgccggtgctgatgaggatgcggtgctgatgagggacgcggtgctgatgaggatgcgggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggacgcggt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tgaggatgcggtgctgatgaggatgcggtgctgatgcggtgctgatgaggacgcggtgctgatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgcagtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgcgatgctgatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggtgctgatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggtgctgatgcggtgctgatgaggacgcggtgctgatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggtgctgatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggtgctgatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcagtgctgatgaggacgcggtgctgatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgcggtgctgatgaggacgcggtgctgatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgcggtgctgatgaggacgcggtgctgatgcggTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACACGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGACGCGGTGCCGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGATGCCGCGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACAGGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGTGGTGCCGATGACGTGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGACGCGGTGCCGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACACGGTGCTGATGAGGACAGGGTGCCGATGAGGACGCGGTGCCGATGAGGACAGGGTGCCGATGAGGACGCGGTGCCGATGAGGACAGGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGTGGACGCGGTCCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACACGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCCGATGAGGACGCGGTGCCGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGAGCCGGTGCCTGATGCGGACGCGGTGCTGATGCGGATGCGGTGCTGATGAGGATGCGGTGCTGATGCGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGATGCGGTGCTGATGCGGACGCGGTGCTGATGCGGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGGGGTGCTGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGACGCGGTGCTGATGCGGACGCGGTGCTGATGAGGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGTGGACGCGGTCCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACACGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCCGATGAGGACGCGGTGCCGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCCGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACACGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGACGCGGTGCCGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGC e calJac3.chr4 169848831 102 + 171630274 I e canFam3.chr1 56151506 409 + 122678785 I e chlSab2.chr13 96644292 4 + 98384682 I e papAnu2.chr4 163866716 0 + 165299245 C e nomLeu3.chr3 156276023 0 + 157873769 C e rheMac3.chr4 168092656 0 + 169853907 C e ponAbe2.chr6 172409085 0 + 174210431 C e macFas5.chr4 169048432 0 - 170955103 C e panTro4.chr6 170657066 0 + 172623881 C a score=61.000000 s hg38.chr6_KB021644v2_alt 75358 5 + 185823 GGTGC- s calJac3.chr4 169848933 6 + 171630274 GGTGCA i calJac3.chr4 I 102 C 0 e canFam3.chr1 56151506 409 + 122678785 I e chlSab2.chr13 96644292 4 + 98384682 I e papAnu2.chr4 163866716 0 + 165299245 C e nomLeu3.chr3 156276023 0 + 157873769 C e rheMac3.chr4 168092656 0 + 169853907 C e ponAbe2.chr6 172409085 0 + 174210431 C e macFas5.chr4 169048432 0 - 170955103 C e panTro4.chr6 170657066 0 + 172623881 C a score=2386.000000 s hg38.chr6_KB021644v2_alt 75363 3 + 185823 TGA s nomLeu3.chr3 156276023 3 + 157873769 TGG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169048432 3 - 170955103 TGG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163866716 3 + 165299245 TGG i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169848939 3 + 171630274 TGG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56151506 409 + 122678785 I e chlSab2.chr13 96644292 4 + 98384682 I e rheMac3.chr4 168092656 0 + 169853907 C e ponAbe2.chr6 172409085 0 + 174210431 C e panTro4.chr6 170657066 0 + 172623881 C a score=512944.000000 s hg38.chr6_KB021644v2_alt 75366 209 + 185823 TGAGGACGCGGTGCTGATGAGGACGGCGAAGGT-CAGGAAGTGCTAGTTCCGAGCGAGGAGGGAA---CAGGAGGTGAGCGGGCTGGGCTTTAGGGTGAGGCGAGGCTCATGAAGACTAAAGAGCCAGGGAGGCGCAGGAACCAGGGAGTC-GAGGATCCAGGGCTCTGCCGAGGGGGCCTCAGC-GGGGAGGCGTGAAGCCGAACAGAACGACA s panTro4.chr6 170657066 208 + 172623881 TGAGGACGCGGTGCTGATGAGGACGGCGAAGGT-CAGGAAGTGCTAGTTCCGAGCGAGGAGGGAA---GAGGAGGTGAGCGAGCTGGGCTTTAGGGTGAGGCGAGGCTCATGAAGACTAAAGAGCCAGG-AGGCGCAGGAACCAGGGAGTC-GAGGATCCAGGGCTCCGCCAAGGGGGCCTCAGC-GGGGAGGCGTGAAGCCGAACAGAATGACA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172409085 214 + 174210431 TGAGGATGTGGTGCTGATGAGGACAGCGAAGGTCCAGGAAGTGCTAGTTCCAAGGGAGGAGGGAAGAGGAGGAGGTGAGCGGGCTGGGCTTTAGGATGAGGCGAGGCTCATGAAGACTAAAGAGCCAGG-AGGCGCAGGAACCTGGGAGTTGGAGGATCCAGGGCTCCGCCAAGGGGGCCTCAGCAGGGGAGGCATGAAGCTGAACAGAATGACA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156276026 209 + 157873769 TGAGGACGTGGTGCTGATGAGGACAGCGAAGGTTCAGGAAGTGCTAGTTCCGAGGGAAGAGGGAA---GAGGAGGTGAGCGGGCTGGGCTTTAGGGTGAGGCGAGGCTCATGAAGACTAAAGAGCCAGG-AGGTGCAGGAAACTGGGAGTG-GAGGATCCAGGGCTCCGCCAAGGGGGCCTCAGC-GAGGAGGCATGAAGCCGAACAGAACGACA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168092656 201 + 169853907 TGAGGACACGGTGCTGATGAGGACGGAGAAGGTTCAGGAAGTGCTAGTTCCATGGGAGGAGGGAA---GAGGAGGTGACC--------CTGAAGGGTGAGGCGAGGCTTGTGAAGACTAAAGAGCCAAG-AGGCGCAGGCACCTGGGTGTG-GAGGATCCAGGGCTCCGCCAAGGGGG-CTCAGCGGGGGAGGCATAAAGCCATCCAGAATGACA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169048435 201 - 170955103 TGAGGACACGGTGCTGATGAGGACGGAGAAGGTTCAGGAAGTGCTAGTTCCATGGGAGGAGGGAA---GAGGAGGTGACC--------CTGAAGGGTGAGGCGAGGCTTGTGAAGACTAAAGAGCCAGG-AGGCGCAGGCACCTGGGTGTG-GAGGATCCAGGGCTCCGCCAAGGGGG-CTCAGCGGGGGAGGCATAAAGCCATCCAGAATGACA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163866719 209 + 165299245 TGAGGACATGGTGCTGATGAGGACGGTGAAGGTTCAGGAAGTGCTAGTTctgtgggaggagggaa---gaggaggtgaCCGGGCTGGGCTTCAGGGTGAGGCGAGGCTTGTGAAGACTAAAGAGCCAGG-AGGCACAGGAACCTGGGTGTG-GAGGATCTAGGGCTCTGCCAAGGGGG-CTCAGCAGGGGATGCATAAAGCCATCCAGAATGACA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96644296 210 + 98384682 TGAGGACATGGTGCTGATGAGGACAGAGGAGGTTCAGGAAGTGCTAGTTCCGTGGGAGGAGGGAA---GAGGAGGTGACCGGGTTGGGCTTCAGGGTGAGGCAAGGCTCGTGAAGACTAAAGAGCCAGG-AGGCGCAGGAACCTGGGTGTG-GAGGATCCAGGGCTCCACCAAGGGTGCCTCAGCGGGGGAGGCATAAAGCCATCCAGAATGACA i chlSab2.chr13 I 4 C 0 s calJac3.chr4 169848942 198 + 171630274 AGAGGATGCAGCGCTGATGACCAC-------GTGCAGGAAGTGCGGGGTTCAAGGGAGGAGGGAG---GAGGAGAT-AGCGGAATGGGCTTGAGGATGAGGCAAGGCTTGTGAAGAATGAAGAGCCTGA-AGGTGCA-GAACAGGGGCGTG-GAGGACCCAGGGCTCCACCGAGGGGC-CTCAGC--GGGAGGCATGGAGCCTTCCAGCATGGCA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56151506 409 + 122678785 I a score=982283.000000 s hg38.chr6_KB021644v2_alt 75575 385 + 185823 GGCAGAGGTGGAGGCTGATGCTGACTGTGTGCTGAA-GCCGGCCCTGTGA-AGTAGGCAG-CCCCATCACTTGGTTCACGGACACGCAGTTCTCAAGGGCGTGCAACCTGCCAGGCGCTGCAGAGCGTCCGGGATGAAAACACTAACATGGATCACTC----GCAGGTCCCCCTGGAG--TCAGGAGGG-ATAACCCGGAAAGAGGCCCCTGTGGTGTGTGCCGCAGC-----CCACAGGGCAGTTCAGTGCCCAGCAGCACCAGGTGGCAGGAGGTGCCTAGGGCAGGCGCC---CCTGTGCAGGACGCTGGGGGACACAAGGGGTTTGGCTGC----------------------------------------------------------------------------AAGACAggagggagggatgggatggggacaggagagaggcacgg-ggacaggagggatgcgatgaggga s panTro4.chr6 170657274 385 + 172623881 GGCAGAGGTGGAGGCTGATGCTGACTGTGTGCTGAA-GCCGGCCCTGTGA-AGTAGGCAG-CCCCATCACTTGGTTCACGGACACGCAGTTCTCAAGGGCGTGCAACCTGCCAGGCGCTGCAGAGCGTCCGGGATGAAAATACTAACGTGGATCACTC----GCAGGTCCCCCTGGAG--TCAGGAGGG-ATGGCCTGGAAAGAGGCCCCTGTAGTGTGTGCCGCAGC-----CCACAGGGCAGTTCAGTGCCCAGCAGCACCAGGTGGCAGGAGGTGCCTAGGGCAGATGCC---CCTGTGCAGGACGCTGGGGGACACAAGGGGTTTGGCTGC----------------------------------------------------------------------------gagacaggagggagggatgggatggggataggagagagggacgg-ggacaggagggatgtgatgaggga i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172409299 383 + 174210431 GGCAGAGGTGGAAGCTGATGCTGACTGTGTGTTGAA-GCCGGCCCTGTGA-AGTAGGCAA-CCCTATCACTTGGTTCACAGACACGTAGTTCTCAAGGGTGTGCAACCTGCCAGGCACTGCAGAGCATCTGGGATGAAAACACTAACATGGATCACTC----GCAGGTCCCCCTGGAG--TCAGGAGGG-ATGACCTGGAAAGAGGCCCCTGGAGTGTGTGCCACAGC-----CTACAGGGCAGTTCAGTGGCCAGCAGCACCAGGTGGCAGGAAGTGCCTAGGGCAGGCGCC---CC-GTGCAGGACGCTGGGGGACACAAGGGGTTTGGCTGC----------------------------------------------------------------------------AACACAggagagagggatgggaagaggataggagagaggcatgg-ggacaggagggatg-gatgaggga i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156276235 461 + 157873769 GGCAGAAGTGGGAGCTGGTGCTGACTGTCTGCTGAA-GCCGGCCCTGTGA-AGTAGGCAG-CCCCATCACTCGGTTCATGGACAAGCAGTTCTCAAGGGCGTGCAACCTGCCAGGCGCTGCAGAGCCTCCGGGATGAAAACACTAACATGGATCACTC----TCAGGTCCCCCTGGAG--TCAGGAGAG-ATGACCTGGAAAGAGGACCCTGGAGTGTGTGCTGCAGC-----CTACGGGGCAGTTCAGTGCCCAGCAGCACCAGGTGGCAGGAGGTGCCTAGGGCAGGCGCC---CCTGTGCACGACGCTGGGGGACATGAGGGGCTTGGCTGTGAGACAGGAGGGAGGGATGGGATGGGAAGGATAGGATGGGGACAGGAGGGAGGGATGGAGGCAGAAGGGAAGGATGAAGACAGGAGGGAGGGATGGGATGGGGACAGGAGAAAAGCATGG-GGACAGGAGGGATGGGATGAGGGA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168092857 381 + 169853907 GGCAGAGGTGGCAGGTGATGCTGATAGTGTGCTAAA-GCCAGCCCTGTGA-AGTAGGCAACCCCCAGCACTTGGTTCAGGAACATGCAGTTCTCAAGGGTGTGCAAACTGCCAGGTGCTGCAGAGCATCTGGGATGAAAAC----ACAGGGATCACAC----GCGGGTCCCCCTGGAG--TCAGGAGGGCACGACCTGGAAAGAGGCCCCTGGAGTGTG-GCCGCAGT-----CCACAGGGCAGTTCAGTGCCCAGCAGCACCAGGTGGCAGGCGGTGCCTAGGGCAGGCACC---CCTGTGCAGGACGCTGGGGG-CACTAGGGGTTTGGCTGG----------------------------------------------------------------------------GAGACAGGAGGGAGGCATGGGCTGGGGACAGGAGAGAGGCATGG-GGACAGGAgggattggatgaggga i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169048636 381 - 170955103 GGCAGAGGTGGCAGGTGATGCTGATAGTGTGCTAAA-GCCAGCCCTGTGA-AGTAGGCAACCCCCAGCACTTGGTTCAGGAACATGCAGTTCTCAAGGGTGTGCAAACTGCCAGGTGCTGCAGAGCATCTGGGATGAAAAC----ACAGGGATCACAC----GCGGGTCCCCCTGGAG--TCAGGAGGGCATGACCTGGAAAGAGGCCCCTGGAGTGTG-GCCGCAGT-----CCACAGGGCAGTTCAGTGCCCAGCAGCACCAGGTGGCAGGTGGTGCCTAGGGCAGGCACC---CCTGTGCAGGACGCTGGGGG-CACTAGGGGTTTGGCTGG----------------------------------------------------------------------------GAGACAGGAGGGAGGCATGGGCTGGGGACAGGAGAGAGGCATGG-GGACAGGAGGGATTGGATGAGGGA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163866928 382 + 165299245 GGCAGAGGTGGCAGGTGATGCTGATAGTGTGCTAAA-GCCAGCCCTGTGA-AGTAGGCAACCCCCAGCACTTGGTTCAGGAACATGCAGTTCTCAAGGGTGTGCAACCTGCCAGGTGCTGCAGAGCATCCGGGATGAAAGC----ACAGGGATCACAT----GCGGGTCCCCCTGGAG--TTAGGAGGGCACGACCTGGAAAGAGGCCCCTGGAGTGTG-GCCGCAGC-----CCACAGGGCAGTTCAGTGCCCAGCAGCACCAGGTGGCAGGAAGTGCCTAGGGCAGGCACC---CCTGTGCAGGACGCTGGGGGACACTAGGGGTTTGGCtgg----------------------------------------------------------------------------gagacaggagggaggcatgggctggggacaggagagagacatgg-gaacaggagggattggatgaggga i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96644506 382 + 98384682 GGCAGAGGTGGCAGGTGATGCTGATTGCGTGCTAAA-GCCAGCCCTGTGA-AGTAGGCAACCCCCAGCACTTGGTTCAGGAACATGCAGTTCTCGAGGGTGTGCAACCTGCCAGGTGCTGCAGAGCATCTGGGATGAAAAC----ACAGGGACCACAC----GCGGGTCCCCATGGAG--TCAGGAGGGCATGACCTGGAAAGAGGCCCCTGGAGTGTG-GCGGCAGC-----CCACAGGGCAGTTCAGTGCCCAGCAGCACGAGGTGGCAGGAGGTGCCTAGGGTAGGCGCC---CCTGTGCAGGACGCTGGGGGACACTAGGGGTTTGGCTGG----------------------------------------------------------------------------GAGAGAGGAGGGAGGGATGGGATAGGGACAGGAGAGAGGCATGG-GGACAGGAGGGACTGGATGAGGGA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169849140 367 + 171630274 GGCAGTGGTGGGGGCTGAGGCTGGCTGTGTGCCAGA-GCT-GCCCTGTTG-AGCAGGCAG-CCCCATCACCTGGTTCAAGGACACGCAGTTCTCAAGGGCATGCAGCCGGCCAGGCACCACAGAGCAT-GGGGATGAAATG-CTGACGCGGAGCCCGC----ATGGGTCCTCCTGGGG--TCAGGAGGGCACGGCCTGAGAAGCAG-CGCTGGAGTGTGTGCTGCAGC-----T--CAGGTCAATTCAGTGCCCAGCAGCACT-GGTAGCAGGAGGTG-CTGAGGTGGGCA-C---CCTGTGTGGGATGCCGGGG--CAGGAGGGGTTTGGCAGT----------------------------------------------------------------------------GAGACAggaggaagggatgggattgggacagg-gggagaaatggaggagaagagggactga-------- i calJac3.chr4 C 0 C 0 s canFam3.chr1 56151915 344 + 122678785 GGCGGTGG-GGAAACTCATTCCTGTTGTTTGCAGAAGGCTGGCCGTGTGGCCGTGTGCAG-TGTCACCGTTTGGTC-------------------GGTGTGTACAACTTGCCAGGTGCCAGAGAGCATCTGGGAAGAAAAC---AGGGGAAATTATGTGAAGGCAGGTCCTCTTGAGGGTCCAGGTGGGGACAGACTGTAAGGAGGA-------------GCCGCAGCACCTGCCAAAGGGCAG---AATGA-CAGGTGCAGATGGTTGCAGGAAGGCCCCACAGTAACCACCATACCTGTGCAG--TGTCTGGGAAGGTGAGCGATTT----GC----------------------------------------------------------------------------AAGACCT--AGTAGAGCTGGGATGGGGAC----------CTCGA-GGAGGTAGGGGAGTCCCTGAGGGA i canFam3.chr1 I 409 I 104 a score=116580.000000 s hg38.chr6_KB021644v2_alt 75960 45 + 185823 ccagagggatgaaatgggattggggacgggagggagggatgggga s panTro4.chr6 170657659 45 + 172623881 ccagagggatgaaatggggttggggatgggagggagggatggaga i panTro4.chr6 C 0 I 1308 s ponAbe2.chr6 172409682 45 + 174210431 ccagagggatgaaatgggattgggggcaggagggagggatgggga i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156276696 45 + 157873769 CCAGAGGGATGAAATGGGACTGGGGACAGGCAGGAGGGATGGGGA i nomLeu3.chr3 C 0 I 19 s rheMac3.chr4 168093238 45 + 169853907 tgggagggatgaaatgggactggggacaggagggagggatgggga i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169049017 45 - 170955103 TGGGAGGGATGAAATGGGACTGGGGACAGGAGGGAGGGATGGGGA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163867310 45 + 165299245 tgggaaggatgaaatgggactggggacaggagggagggatgggga i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96644888 45 + 98384682 CGGGAGGGATGAAATGGGACTGGGGACAGGAGGGAGGGATGGGGA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169849507 25 + 171630274 --------------------tggggacaggaggaagggatgggga i calJac3.chr4 C 0 C 0 e canFam3.chr1 56152259 104 + 122678785 I a score=83389.000000 s hg38.chr6_KB021644v2_alt 76005 35 + 185823 ---cagaagggagggaaatgg-----gatgggagggatgggat s panTro4.chr6 170659012 35 + 172623881 ---cagaagggagggaaatgg-----gatgggagggatgggat i panTro4.chr6 I 1308 C 0 s ponAbe2.chr6 172409727 40 + 174210431 ---cagaagggagggatatggggacaggagggagggatgggat i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156276760 35 + 157873769 ---CAGAAGGGAGGGAAATGG-----GATGGGAGGGATGGGAT i nomLeu3.chr3 I 19 C 0 s rheMac3.chr4 168093283 35 + 169853907 ---caggagagaggggaatgg-----gatgggagtgatgggat i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169049062 35 - 170955103 ---CAGGAGAGAGGGGAATGG-----GATGGGAGTGATGGGAT i macFas5.chr4 C 0 I 306 s papAnu2.chr4 163867355 35 + 165299245 ---caggagagaggggaatgg-----gatgggagtgatgggat i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96644933 35 + 98384682 ---CAGGAGAGAGGGGAATGG-----GATGGGAGTGATGGGAT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169849532 36 + 171630274 caggaggagaaatgggagaga-----agagggagggatggg-- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56152259 104 + 122678785 I a score=5600.000000 s hg38.chr6_KB021644v2_alt 76040 2 + 185823 gg s panTro4.chr6 170659047 2 + 172623881 gg i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172409767 2 + 174210431 gg i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156276795 2 + 157873769 GG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168093318 2 + 169853907 gg i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169049403 2 - 170955103 GG i macFas5.chr4 I 306 C 0 s papAnu2.chr4 163867390 2 + 165299245 gg i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96644968 2 + 98384682 GG i chlSab2.chr13 C 0 I 256 e calJac3.chr4 169849568 0 + 171630274 C e canFam3.chr1 56152259 104 + 122678785 I a score=6106.000000 s hg38.chr6_KB021644v2_alt 76042 4 + 185823 agac s panTro4.chr6 170659049 4 + 172623881 gGAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172409769 4 + 174210431 ggac i ponAbe2.chr6 C 0 I 274 s nomLeu3.chr3 156276797 4 + 157873769 GGAC i nomLeu3.chr3 C 0 I 46 s rheMac3.chr4 168093320 4 + 169853907 gGAC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169049405 4 - 170955103 AAAC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163867392 4 + 165299245 ggac i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169849568 0 + 171630274 C e canFam3.chr1 56152259 104 + 122678785 I e chlSab2.chr13 96644970 256 + 98384682 I a score=2548.000000 s hg38.chr6_KB021644v2_alt 76046 1 + 185823 a s panTro4.chr6 170659053 1 + 172623881 A i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172410047 1 + 174210431 a i ponAbe2.chr6 I 274 C 0 s nomLeu3.chr3 156276847 1 + 157873769 A i nomLeu3.chr3 I 46 C 0 s rheMac3.chr4 168093324 1 + 169853907 A i rheMac3.chr4 C 0 I 276 s macFas5.chr4 169049409 1 - 170955103 A i macFas5.chr4 C 0 I 12 s papAnu2.chr4 163867396 1 + 165299245 a i papAnu2.chr4 C 0 I 84 s chlSab2.chr13 96645226 1 + 98384682 A i chlSab2.chr13 I 256 C 0 e calJac3.chr4 169849568 0 + 171630274 C e canFam3.chr1 56152259 104 + 122678785 I a score=66633.000000 s hg38.chr6_KB021644v2_alt 76047 21 + 185823 gacaggagggagggatgggGT s panTro4.chr6 170659054 21 + 172623881 GACAGGAGGGAGGGATGGGGT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172410048 21 + 174210431 gacaggagggagggatggggg i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156276848 21 + 157873769 GACAGGAGGGAGGGATGGGGG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168093601 21 + 169853907 gacaggagggagggatggggg i rheMac3.chr4 I 276 C 0 s macFas5.chr4 169049422 21 - 170955103 GACAGGAGGGAGGGATGGGGG i macFas5.chr4 I 12 C 0 s papAnu2.chr4 163867481 21 + 165299245 gacaggagggagggatggggg i papAnu2.chr4 I 84 C 0 s chlSab2.chr13 96645227 21 + 98384682 GACAGGAGGGAGGGATGGGGG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169849568 21 + 171630274 gacaggaagaagggatgggaT i calJac3.chr4 C 0 M 4290 e canFam3.chr1 56152259 104 + 122678785 I a score=111833.000000 s hg38.chr6_KB021644v2_alt 76068 49 + 185823 ACAGGAGGATCTCAGCTGGGGGACAGGAGGGATGAGACAGGGTAGTTGG s panTro4.chr6 170659075 49 + 172623881 ACAGGAGGATCTCAGCTGGGGGACAGGAGGGATGAGACAGGGTAGTTGG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172410069 49 + 174210431 acaggaggATCTCAGCTGGGGGACAGGACGGATGAGACAGGGTAGTTGG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156276869 49 + 157873769 ACAGGAGGATCTCAGCTGGCGGACAGGAGGGATGAGACAGGGTAGTTGG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168093622 49 + 169853907 acaggaggATCTCAGCTGCAGGACAGGTGGAATGAGATGGAGTAGTTGG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169049443 49 - 170955103 ACAGGAGGATCTCAGCTGCAGGACAGGTGGAATGAGATGGAGTAGTTGG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163867502 49 + 165299245 acaggaggatCTCAGCTGCAGGACAGGTGGGATGAGATGGGGTAGTTGG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96645248 49 + 98384682 ACAGGAGGATCTCAGCTCCAGGACAGGAGGGATGAGATGGGGTAGTTGG i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169849589 4290 + 171630274 M e canFam3.chr1 56152259 104 + 122678785 I a score=1025304.000000 s hg38.chr6_KB021644v2_alt 76117 422 + 185823 GCTTCCAGAAAGGCCAAGGAGAGCTTCTCTGGAGTCTGTACAGAAGCAGGAAGCTCAGTGAGGACACCCCTGGGATCCTGCTGATGAGGGAGAAGAGAGCTTTACACTCAGGCCCAGGCTGTCCCCGCTGGCTGCTGTGGCGCTCGGCTCTGGGAGAGGCCCGTGCTGCTTTTCCTGCGCGACACCAGCAGGAGTGATGTGGAGGAGAGGCTGACAGG---CTCAGAAAGTGAGGGACGGGCTCCATCCAAATCGATGGGCAGTGAAGATTGGCATGGTGCTGAGAGCCCAGGACAGCTGCA-CAGGGACCACACTGACCACGGCACCCACTCAGCATTTTCCCTCGTGGGCCAGGATGCTTATCCTCCTCTGAAGGGAACCCTGTCAGTGCTGACCA----------TCTTTTACCAGGTATTGGAGGATGCTTA s panTro4.chr6 170659124 422 + 172623881 GCTTCCAGAAAGGCCAAGGAGAGCTTCTCTGGAGTCTGTACAGAAGCAGGAAGCTCAGTGAGGACGCCCCTGGGATCCTGCTGATGAGGGAGAAGAGAGCTTTACGCTCAGGCCCAGGCTGTCCCCGCTGGCTGCTGTGGCGCTCGGCTCTGGGAGAGGCCCGTGCTGCTTTTCCTGCGCGATGCCAGCAGGAGTGGTGTGGAGGAGAGGCTGACAGG---CTCGGAAAGTGAGGGACGGGCTCCATCCAAATCAATGGGCAGTGAAGATTGGCATGGGGCTGAGAGCCCAGGACAGCTGCA-CAGGGACCACACTGACCACGGCACCCACTCAGCATTTTCCCTCGTGGGCCAGGATGCTTATCCTTCTCTGAAGGGAACCCTGTCAGTGCTGACCA----------TCTTTTATCAGGTATTGAAGGATGCTTA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172410118 422 + 174210431 GCTTCCAGAAAGGCCAAGGAGAGCTTCTCTGGAGTCTGTGCAGAAGCAGGAAGCTCAGTGAGGATGCCCCTGGGATCCTGCCGATGAGGGAGAAGAGAGCTTTACACTCAGGCCCAGCCTGTCCCCGCTGGCTGCTGTGGCACTCGGCTCTGGGAGAGGCACGTGCTGCTTTTCCTGCATGACACCAGCAGGAGTTACGTGGAGGAGAGGGTGACAGA---CTCGGAAAGTGAGGGACAGGCTCCATCCAAATCAATGGGCAGTGAAGATTGGCATGGGGCTGAGAGCCCAGGACAGCTGCA-CAGGGACCACACTGACCACGGCACCCACTCAGCATCTTCCCTCGTGGGCCAGGATGCTTATCCTCCTCTAAAGGGAACCCTGTCAGTGCTGACCA----------TCATTTACCAGGTATTGAATGATGCTTA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156276918 422 + 157873769 GTTTCCAGAAAGGCCCAGGAGAGTTTCTCTGGAGTCTGGGCAGAAGCAGGAAGCTCAGCGAGGACACCCCTGGGATCCTGCTGATGAGGGAGAAGAGAGCTTTACACTCAGGCCCAGGCTGTCCCCGCTGGCTGCTGTGGCACTCGGCTCTGGGAGAGGCACGTGCTGCTTTTTCTGTGTGACACCAGCAGGAGTGATGTGGAGGAGAGGCTGACAGA---CTTGGAAAGTGAGGGACGGGCTCCATCCAAATCGATGGGCAGTGAAGATTGGCATGGGGCTGAGAGCCTGGGACAGCTGCA-CGGGGACCACACTGACCACGGCACCCACTCAGCATCTTCCCTCGTGGGCCAGGATGCTTATCCTCCTCTAAAGGGAGCCCTGTCGATGCTGACCA----------TCTTTTACCAGGTATTGAATGATGCTTA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168093671 421 + 169853907 GTTTCCAGAAAGGCCAAGGAGAGCTTCTTTGGAATCTGTGCAGAAGCAGGAAGCTCAGTGAGGACGCCCCTGGGATCCTGCTGATGAAGGAGAAGAGAGTTTTACACTCAGGCCCAAGCTGTCCCCACTGGCTGCTGTGGCACTCGACTCTGGGAGAGGCACATGCTGCTTTTCCTGCCTGACACCAGCAGGAGTGATGTGGAGGAGAGGCTGACAGA---CTCGGAAAGTGAGGGACGGGCTCCATCCAAATCAATGGGCAGTGAAGATTGGCATGGAGCTGAGAGCCCAGGACAGCTGCG-CAGGGACCACACTGACCACAGCACCCACTCAGCATCTTCCCATGTGGGCCAGGATGCTTATCCTCCTCTAAAGGGAACCCTGTCCGTGCTGACCG----------TCTTTTACT-GGTATTGAATGATGCTTA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169049492 421 - 170955103 GTTTCCAGAAAGGCCAAGGAGAGCTTCTTTGGAATCTGTGCAGAAGCAGGAAGCTCAGTGAGGACGCCCCTGGGATCCTGCTGATGAAGGAGAAGAGAGTTTTACACTCAGGCCCAAGCTGTCCCCACTGGCTGCTGTGGCACTCGACTCTGGGAGAGGCACATGCTGCTTTTCCTGCCTGACACCAGCAGGAGTGATGTGGAGGAGAGGCTGACAGA---CTCGGAAAGTGAGGGACGGGCTCCATCCAAATCAATGGGCAGTGAAGATTGGCATGGAGCTGAGAGCCCAGGACAGCTGCG-CAGGGACCACACTGACCACAGCACCCACTCAGCATCTTCCCATGTGGGCCAGGATGCTTATCCTCCTCTAAAGGGAACCCTGTCCGTGCTGACCG----------TCTTTTACT-GGTATTGAATGATGCTTA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163867551 421 + 165299245 GTTTCCAGAAAGGCCAAGGAGAGCTTCTCTGGAATCTGTGCAGAAGCAGGAAGCTCAGTGAGGACGCCCCTGGGATCCTGCTGATGAAGGAGAAGAGAGCTTTACATTCAGGCCCAGGCTGTCCCCACTGGCTGCTGTGGCACTTGACTCTGGGAGAAGCACGTGCTGCTTTTCCTGCGTGACACCAGCAGGAGTGATGTGGAGGAGAGGCTGACAGA---CTCGGAAAGTGAGGGATGGGCTCCATCCAAATCAATGGGCAGTGAAGATTGGCGTGGAGCTGAGAGCCCAGGACAGCTGCG-CAGGGACCACACTGACCACAGCACCCACTCAGCATCTTCCCATGTGGGCCGGGATGCTTATCCTCCTCTAAAGGGAACCCTGTCCGTGCTGACCG----------TCTTTTACC-GGTATTCAATGATGCTTA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96645297 421 + 98384682 GTTTCCAGAAAGGCCAAGGAGAGCTTCTCTGGAATCTGTGCAGAAGCAGGAAGGTCAGTGAGGACGCCCCTGGGATCCTGCTGATGAAGGAGAAGAGAGCTTTACACTCAGACCCAGGCTGTCCCCACTGGTTGCTGTGGCACTAGACTCTGGGAGACGCACGTGCTGCTTTTCCTGCGTGACACCAGCAGCAGTGATGTGGAGGAGAGGCTGACAGA---CTCGGAAAGTGAGGGACGGGCTCCATCCAAATCAATGGGCAGTGAAGATTGGCGTGGAGCTGAGAGCCCAGGACAGCTGTG-CAGGGACCACACTGACCACAGCACCCACTCAGCATCTTCCCATGTGGGCCGGGATGCTCATCCTCCTCTAAAGGGAACCCTGTCCGTGCTGACCG----------TCTTTTACT-GGTATTGAATGATGCTTA i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56152363 325 + 122678785 GTTTCCAGAAAGGTGGAGATAAGCCTGATGGACCTCAGGTCAGAGGCTG--------GTGCTGA----CCTGTGACCCCCATG---------------GCCTTGGGCTCA----------CTCCCCAGTGA-----GCGGAGCTCTCCATAAGGAGAG---TGTGCCATC------------CACCCGCACGAGC----TGGGAGAGAGCTTG-CAGGTGCCTCCAAC----AGGGACAGGCCT------------GGGGCACCGAGGA--GGCACGA----GAGAGCTGGGGGCAGCTGCGTCACGGGTGACCCAGATC-CGAC-----CTCGGCA--------------CTGGGACGCTGACCC------AGAGAAGGCTGGGTCAGTGCCGGCTGTGCATTAGTTTGTTTTACC-AGCATTGAACAACCCCAA i canFam3.chr1 I 104 C 0 e calJac3.chr4 169849589 4290 + 171630274 M a score=553698.000000 s hg38.chr6_KB021644v2_alt 76539 194 + 185823 GCAAAATCCTTTGACCAAAGGCTCGACATTCACAGATTCTAGACGTTCCTATGAAAATACCTACTTATTT---CCACTGGACTGAACTCTGATTAAAATAAAAACAAGGACACCAGGAAAGACTACACAAAGCCTGTA-TGCCCCATAGTTGCCTCGGAGAACCCAGGAATCATGCAGGTGGGCCTGGGGAAGCCCAA s panTro4.chr6 170659546 195 + 172623881 GCAAAATCCTTTGACCAAAGGCTCGACATTCACAGATTCTAGACGTTCCTATGAAAATACCTACTTATTT---CCACTGGACTGAACTCTGATTAAAATAAAAACAAGGACACCAGGAAAAACTACGCAAAGCCTGTATTGCCCCATAGTTGCCTCGGAGAACCCAGGAACCATGCAGATGGGCCTGGGGAAGCCCAA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172410540 194 + 174210431 GCAAAATCCTTTGACCAAAGGCTCAACATTCACAGATTCTAGACATTTCTATGAAAATACTTACTTATTT---CCATTGGACTGAACTCTGATTAAAATAAAAACAAGGACACCAGGAAAAACTACACAAAGCCTATA-TGCCCCATAGTTGCCTCGGAGAACCCAGGAACCTTGCAGATGGGCCTGGAGAAGCCCGA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156277340 188 + 157873769 GCAAAATCCTTTGACCAAAGGCTCGACATTAACG---TCTAG---TTCCTATGAAAATACCTACTTATTT---CCATTGGACTGAACTCTGATTAAAATAAAAACAAGGACACCAGGAAAAACTACACAAAGCCTATA-TGCCCCGTAGTTGCCTCGAAGAACCCAGGAACCGTGCAGATGGGCCTGGGGAAGCCCCA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168094092 196 + 169853907 GCAAAATCTTTCGACCAAAGACTCGACATCAACAGATTCTAGACATTCCTATGAAAATACCTACTTATTTTAACCATGGGACTGAACTCTGATTAAAATAAAAACAAGGACACCAGGAAAAACTACACAAAGCCTATA-TGCCCCACAGTTGCCTTGGAGAACCCAGGAACCG-GCAGATAGGCCTGGGGGAGCCCGA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169049913 196 - 170955103 GCAAAATCCTTCGACCAAAGACTCGACATCAACAGATTCTAGACATTCCTATGAAAATACCTACTTATTTTAACCATGGGACTGAACTCTGATTAAAATAAAAACAAGGACACCAGGAAAAACTACACAAAGCCTATA-TGCCCCACAGTTGCCTTGGAGAACCCAGGAACCG-GCAGATAGGCCTGGGGGAGCTCGA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163867972 196 + 165299245 GCAAAATCCTTCGACCAAAGACTCGACATCAACAGATTCTAGACATTCCTATGAAAATACCTACTTATTTTAACCATGGGACTGAACtctgattaaaataaaaacaaggacaCCAGGAAAAACTACACAAAGCCTACA-TGCCCCACAGTTGCCTTGGAGAATCCAGGAACAA-GCAGATAGGCCTGGGGGAGCCCGA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96645718 196 + 98384682 GCAAAATCCTTCGACCAAAGACTGGACATTAACAGATTCTAGACATTCCTATGAAAATACCTACTTATTTTAACCATAGGACTGAACTCTGATTAAAATAAAAACAAGGACACCAGGAAAAACTACACAAAGCCTATA-TGCCCCACAGTTGCCTTGGAGAATCCAGGAACCA-GCAGATAGGCCTGGGGGAGCCCAA i chlSab2.chr13 C 0 I 3 s calJac3.chr4 169853886 164 + 171630274 GCAAAATCCTTTGACT-----CTCGACATTAACTGAGTCTAGTCATTCCTGTGAAAATACTGACTTATTT---CCAT-----TAAACTCTTATTAAAATAAAAACAAGGACACGAGGAAAAACTACACAGAGTCTGGA---------------------GAACCCAGGAACCGTGCAGACAGGCCTGGGGAAGCCCGA i calJac3.chr4 M 4290 C 0 s canFam3.chr1 56152688 174 + 122678785 ACAGAACCCTC------AAATCTCTACATCAACTAGACGCCAACATCCCTGTGAAAATATCTACAACTTT---CCATCCAACTAGACTTTGACtaaaataaaataa-----------aaaaaataCACAAAATCCACA-TGCCGTGCAGGTGCCTCCAAGAGCCCAGAAGCAT-CCAAGCGG--CTTGGGAATCCTGG i canFam3.chr1 C 0 C 0 a score=11685.000000 s hg38.chr6_KB021644v2_alt 76733 6 + 185823 TGTGTG s panTro4.chr6 170659741 6 + 172623881 TGTGTG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172410734 6 + 174210431 TGTGTG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156277528 6 + 157873769 TGTGTG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168094288 6 + 169853907 CATGTG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169050109 6 - 170955103 CATGTG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163868168 6 + 165299245 CATGTG i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169854050 2 + 171630274 ----TG i calJac3.chr4 C 0 C 0 s canFam3.chr1 56152862 6 + 122678785 TTTGTG i canFam3.chr1 C 0 I 33 e chlSab2.chr13 96645914 3 + 98384682 I a score=14889.000000 s hg38.chr6_KB021644v2_alt 76739 8 + 185823 TGACACCA--- s panTro4.chr6 170659747 8 + 172623881 TGACACCA--- i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172410740 8 + 174210431 TGACACCA--- i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156277534 8 + 157873769 TGACACCA--- i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168094294 8 + 169853907 TGACACCA--- i rheMac3.chr4 C 0 I 342 s macFas5.chr4 169050115 8 - 170955103 TGACACCA--- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163868174 8 + 165299245 TGACACCA--- i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169854052 11 + 171630274 TGTCAGCAGCA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645914 3 + 98384682 I a score=3780.000000 s hg38.chr6_KB021644v2_alt 76747 3 + 185823 TGT s panTro4.chr6 170659755 3 + 172623881 TGT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172410748 3 + 174210431 CGT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156277542 3 + 157873769 TGT i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169050123 3 - 170955103 CGT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163868182 3 + 165299245 CGT i papAnu2.chr4 C 0 I 6 s calJac3.chr4 169854063 3 + 171630274 CGC i calJac3.chr4 C 0 I 1 e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645914 3 + 98384682 I e rheMac3.chr4 168094302 342 + 169853907 I a score=1124.000000 s hg38.chr6_KB021644v2_alt 76750 8 + 185823 G--------------GGGCTGG s panTro4.chr6 170659758 8 + 172623881 G--------------GGGCTGG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172410751 7 + 174210431 G--------------GGGCC-A i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156277545 8 + 157873769 G--------------GGGCTGG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169050126 7 - 170955103 ---------------AACCCAG i macFas5.chr4 C 0 I 29 s papAnu2.chr4 163868191 22 + 165299245 GGAACCGTGCAGATAAGCCTGG i papAnu2.chr4 I 6 I 14 s calJac3.chr4 169854067 8 + 171630274 G--------------GGGCTGG i calJac3.chr4 I 1 C 0 e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645914 3 + 98384682 I e rheMac3.chr4 168094302 342 + 169853907 I a score=1895.000000 s hg38.chr6_KB021644v2_alt 76758 4 + 185823 CGCA s panTro4.chr6 170659766 4 + 172623881 CGCA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172410758 4 + 174210431 TACG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156277553 4 + 157873769 CGCA i nomLeu3.chr3 C 0 C 0 s papAnu2.chr4 163868227 2 + 165299245 --CA i papAnu2.chr4 I 14 I 2 s calJac3.chr4 169854075 4 + 171630274 CGTG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645914 3 + 98384682 I e rheMac3.chr4 168094302 342 + 169853907 I e macFas5.chr4 169050133 29 - 170955103 I a score=44644.000000 s hg38.chr6_KB021644v2_alt 76762 33 + 185823 TCCCTGCTCTGACATGTGT--------------------GTATCCCTGCCGTG s panTro4.chr6 170659770 31 + 172623881 TCCCTGCTGTG--ATGTGT--------------------GTATCCCTGCTGTG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172410762 33 + 174210431 TCCCTGCAGTGACATGTGT--------------------GTATCTCTGCCATG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156277557 33 + 157873769 TCCCTGCTGTGACTTGTGT--------------------GTATCTCTGCCGTG i nomLeu3.chr3 C 0 I 81 s rheMac3.chr4 168094644 33 + 169853907 TCCCTGCTGTGACACGTGT--------------------GTATCTCTGCCGTG i rheMac3.chr4 I 342 C 0 s papAnu2.chr4 163868231 33 + 165299245 TCCCTGCTGTGACACATGT--------------------GTATCTCTGCCGTG i papAnu2.chr4 I 2 C 0 s calJac3.chr4 169854079 53 + 171630274 TCCCTGCTGTGAGGTGTGTGACCACATGTAGGGGCCGGCGTGTCCCTGCTGTG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645914 3 + 98384682 I e macFas5.chr4 169050133 29 - 170955103 I a score=1365.000000 s hg38.chr6_KB021644v2_alt 76795 1 + 185823 A s panTro4.chr6 170659801 1 + 172623881 A i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156277671 1 + 157873769 A i nomLeu3.chr3 I 81 C 0 s rheMac3.chr4 168094677 1 + 169853907 A i rheMac3.chr4 C 0 I 16 s papAnu2.chr4 163868264 1 + 165299245 A i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169854132 1 + 171630274 A i calJac3.chr4 C 0 C 0 e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645914 3 + 98384682 I e ponAbe2.chr6 172410795 0 + 174210431 C e macFas5.chr4 169050133 29 - 170955103 I a score=-1184.000000 s hg38.chr6_KB021644v2_alt 76796 2 + 185823 TG- s panTro4.chr6 170659802 2 + 172623881 TG- i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156277672 2 + 157873769 TG- i nomLeu3.chr3 C 0 C 0 s papAnu2.chr4 163868265 2 + 165299245 CA- i papAnu2.chr4 C 0 I 14 s calJac3.chr4 169854133 2 + 171630274 -GG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645914 3 + 98384682 I e rheMac3.chr4 168094678 16 + 169853907 I e ponAbe2.chr6 172410795 0 + 174210431 C e macFas5.chr4 169050133 29 - 170955103 I a score=1692.000000 s hg38.chr6_KB021644v2_alt 76798 3 + 185823 TGT s panTro4.chr6 170659804 3 + 172623881 TGT i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156277674 3 + 157873769 TGT i nomLeu3.chr3 C 0 I 13 s calJac3.chr4 169854135 3 + 171630274 TGT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645914 3 + 98384682 I e papAnu2.chr4 163868267 14 + 165299245 I e rheMac3.chr4 168094678 16 + 169853907 I e ponAbe2.chr6 172410795 0 + 174210431 C e macFas5.chr4 169050133 29 - 170955103 I a score=15711.000000 s hg38.chr6_KB021644v2_alt 76801 22 + 185823 -------------GGGGCTGGCACGTCCCTGCTGT s panTro4.chr6 170659807 22 + 172623881 -------------GGGGCTGGCACGTCCCTGCTGT i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156277690 22 + 157873769 -------------GGGGCTGGCGTGTCCCTGCTGT i nomLeu3.chr3 I 13 C 0 s papAnu2.chr4 163868281 22 + 165299245 -------------GAGGCCGACGTGTCCCTCCTGT i papAnu2.chr4 I 14 C 0 s calJac3.chr4 169854138 35 + 171630274 GTGACCCCATGTGGGGGCCGGCGTGTCCCTGCTGT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645914 3 + 98384682 I e rheMac3.chr4 168094678 16 + 169853907 I e ponAbe2.chr6 172410795 0 + 174210431 C e macFas5.chr4 169050133 29 - 170955103 I a score=24094.000000 s hg38.chr6_KB021644v2_alt 76823 26 + 185823 GACATGTGTGACACCACGT------GGGGCCG s panTro4.chr6 170659829 26 + 172623881 GACATGTGTGACACCATGT------GGGGCTG i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156277712 26 + 157873769 GACATGTGTGACACCACGT------TGGGCCA i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169050162 32 - 170955103 GACATGTGTGACACCACGTAACCCAGGAACCG i macFas5.chr4 I 29 C 0 s papAnu2.chr4 163868303 26 + 165299245 GACGTGTGTGACACCACAT------GGGGCTG i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169854173 27 + 171630274 GAGGTGTGTGACCCCATGT-----GGGGGCTG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645914 3 + 98384682 I e rheMac3.chr4 168094678 16 + 169853907 I e ponAbe2.chr6 172410795 0 + 174210431 C a score=19739.000000 s hg38.chr6_KB021644v2_alt 76849 21 + 185823 GCGTGTCCCTGCTGTGACAAG s panTro4.chr6 170659855 21 + 172623881 GCGTGTCCCTGCTGTGACATG i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156277738 21 + 157873769 GTGTGTCCCTGCTGTGACGTG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169050194 9 - 170955103 GCA------------GATAGG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163868329 21 + 165299245 GTGTGTCCCTGCTGTGACATG i papAnu2.chr4 C 0 T 83 s chlSab2.chr13 96645917 21 + 98384682 GCGTGTCCCTGCTGTGACAAG i chlSab2.chr13 I 3 C 0 s calJac3.chr4 169854200 19 + 171630274 GCGTGTCCCTGCTGTGAGG-- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56152868 33 + 122678785 I e rheMac3.chr4 168094678 16 + 169853907 I e ponAbe2.chr6 172410795 0 + 174210431 C a score=5730.000000 s hg38.chr6_KB021644v2_alt 76870 4 + 185823 TGTG s panTro4.chr6 170659876 4 + 172623881 TGTG i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156277759 4 + 157873769 TGTG i nomLeu3.chr3 C 0 C 0 s papAnu2.chr4 163868267 4 + 165299245 TGTG i papAnu2.chr4 T 83 C 0 s chlSab2.chr13 96645938 4 + 98384682 TGTG i chlSab2.chr13 C 0 I 16 s calJac3.chr4 169854219 4 + 171630274 TGTG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56152868 33 + 122678785 I e rheMac3.chr4 168094678 16 + 169853907 I e ponAbe2.chr6 172410795 0 + 174210431 C e macFas5.chr4 169050203 0 - 170955103 C a score=40606.000000 s hg38.chr6_KB021644v2_alt 76874 76 + 185823 ACACCACGTGGGGGCCGGCGTGTCCCTGCTGTGATGTGTGTGACACCAT-------------------GT-------------------------------------------------------------GGGGCCGGCACGTCCCTGCTGTGAC s panTro4.chr6 170659880 137 + 172623881 ACACCACGTGGGGGCCGGTGTGTCCCTGCTGTGATGTGTGTGACACCAC-------------------GTGGGGGCCGGCGTGTCCCTGCTGTGATGTGTGTATCTCAGCTGTGATGTGCGACCCCACACGGGGGCTGGTGTGTCCCTGCTATGAC i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156277763 77 + 157873769 ACACCACATGGGGGCTGGCATGTCCCTGCTGTGACGTGTGTGACACCAC-------------------AT------------------------------------------------------------GGGGGCTGGCGTGTCCCTGCCGTGAC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169050203 70 - 170955103 ---CCTGGGGGAGCCC----------------GACATGTGTGACACCACGTAACCCAGGAACTGGCAGAT-------------------------------------------------------------AGGCCTGGGGGAGCCC------GAC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163868271 76 + 165299245 ACACCACACAGAGGCCGACGTGTCCCTCCTGTGACGTGTGTGACACCAC-------------------AT-------------------------------------------------------------GGGGCTGGTGTGTCCCTGCTGTGAC i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169854223 76 + 171630274 ACTCCATGTGTGGGCCGGCGTGTCCCTGCTGTGAGGTGTGTGACCCCAT-------------------GT------------------------------------------------------------GTGGGCCGGCGTGTCCCTGCTGTGA- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645942 16 + 98384682 I e rheMac3.chr4 168094678 16 + 169853907 I e ponAbe2.chr6 172410795 0 + 174210431 C a score=923.000000 s hg38.chr6_KB021644v2_alt 76950 3 + 185823 ATG- s panTro4.chr6 170660017 3 + 172623881 GTG- i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172410795 3 + 174210431 ATG- i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156277840 3 + 157873769 GTG- i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169050273 3 - 170955103 ATG- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163868347 3 + 165299245 ATG- i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169854299 2 + 171630274 --GG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645942 16 + 98384682 I e rheMac3.chr4 168094678 16 + 169853907 I a score=5260.000000 s hg38.chr6_KB021644v2_alt 76953 3 + 185823 TGT s panTro4.chr6 170660020 3 + 172623881 TGT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172410798 3 + 174210431 TGT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156277843 3 + 157873769 GGT i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169050276 3 - 170955103 TGT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163868350 3 + 165299245 AGT i papAnu2.chr4 C 0 T 127 s chlSab2.chr13 96645958 3 + 98384682 TGT i chlSab2.chr13 I 16 C 0 s calJac3.chr4 169854301 3 + 171630274 TGT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56152868 33 + 122678785 I e rheMac3.chr4 168094678 16 + 169853907 I a score=15505.000000 s hg38.chr6_KB021644v2_alt 76956 10 + 185823 GACACCACGT s panTro4.chr6 170660023 10 + 172623881 GACACCACGT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172410801 10 + 174210431 GACAGCATGT i ponAbe2.chr6 C 0 I 1 s nomLeu3.chr3 156277846 10 + 157873769 GACACCACAT i nomLeu3.chr3 C 0 I 1 s macFas5.chr4 169050279 10 - 170955103 GACACCACGT i macFas5.chr4 C 0 I 6 s chlSab2.chr13 96645961 10 + 98384682 GACACCACGT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169854304 10 + 171630274 GACTCCATGT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56152868 33 + 122678785 I e papAnu2.chr4 163868353 127 + 165299245 T e rheMac3.chr4 168094678 16 + 169853907 I a score=11723.000000 s hg38.chr6_KB021644v2_alt 76966 7 + 185823 -GGGGCCG s panTro4.chr6 170660033 7 + 172623881 -GGGGCCG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172410812 7 + 174210431 -GGGGCCT i ponAbe2.chr6 I 1 C 0 s nomLeu3.chr3 156277857 7 + 157873769 -GGGGCTA i nomLeu3.chr3 I 1 C 0 s rheMac3.chr4 168094694 7 + 169853907 -GGGGCCG i rheMac3.chr4 I 16 C 0 s macFas5.chr4 169050295 7 - 170955103 -GGAACCG i macFas5.chr4 I 6 I 27 s chlSab2.chr13 96645971 7 + 98384682 -GGGGCCC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169854314 8 + 171630274 GTGGGCCG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56152868 33 + 122678785 I e papAnu2.chr4 163868353 127 + 165299245 T a score=104938.000000 s hg38.chr6_KB021644v2_alt 76973 62 + 185823 GCGTGTCCCTGCTGTGACA-----------------------------------------------------------TGTGTGACACCACGT-GGGGCCGGCGTGTCCCTGCTGTGACATG s panTro4.chr6 170660040 121 + 172623881 GCGTGTCCCTGCTGTGACATGTGTGTATCCCTGCCGTGACGTGTGACACCATGTGGGGCCGGCGTATCCCTGCCGTGATGTGTGACACCATGC-GGGGCCGGCGTGTCCCTGCTGTGACGTG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172410819 61 + 174210431 GCATGTCCCTGCCGTGA-------------------------------------------------------------CGTGTGACACCACGTGGGGGCCGGCATGTCCCTGCTGTGACATG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156277864 62 + 157873769 GCATGTCCCTGCTGTGACA-----------------------------------------------------------TGTGTGACACCACAT-GAGACTAGTGTGTCTCTGCTGTGATGTG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168094701 62 + 169853907 ACGTGTCCCTCCTGTGACG-----------------------------------------------------------TGTGTGACACCACGT-GGGGCTGGTGTGTCCCTGCTGTGACATG i rheMac3.chr4 C 0 T 83 s macFas5.chr4 169050329 43 - 170955103 GCATGTCCCTGCTGTGACA-----------------------------------------------------------CGT--------------------GTGTATCTCTGCCGTGACATG i macFas5.chr4 I 27 C 0 s papAnu2.chr4 163868226 43 + 165299245 GCATGTCCCTGCTGTGACA-----------------------------------------------------------CAT--------------------GTGTATCTCTGCCGTGACATG i papAnu2.chr4 T 127 C 0 s chlSab2.chr13 96645978 62 + 98384682 GTGTGTCCCTGCTGTGATG-----------------------------------------------------------TGTGTGACACCACGT-GGGGCCCGTGTGTCCCTGCTGTGACATG i chlSab2.chr13 C 0 T 82 s calJac3.chr4 169854322 63 + 171630274 GCGTGTCCCTGCTGTGAGG-----------------------------------------------------------TGTGTGACCCCATGTGGGGACTGGCGTGTCCCTGCTGTGAGGTG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56152868 33 + 122678785 I a score=110890.000000 s hg38.chr6_KB021644v2_alt 77035 46 + 185823 TGT------------------GACACCACGTGGGGGCCGGCGTGTCCCTGCTGTGATGTGTGTG s panTro4.chr6 170660161 64 + 172623881 TGTATCTCTGCCGTGATGTGCGACCCCACACGGGGGCTGGTGTGTCCCTGCTATGACGTGTGTG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172410880 46 + 174210431 TGT------------------GACACCCCGTGGGGACCGGTGTGTCCCTGCTGTGACGTGTGTG i ponAbe2.chr6 C 0 I 1579 s nomLeu3.chr3 156277926 46 + 157873769 TGT------------------AACACCGCATGGGGGCTGGCGTGTCCCTGCTGTGACATGTGTG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168094680 46 + 169853907 TGT------------------GACACCACACAGGGGCCGACGTGTCCCTCCTGTGACGTGTGTG i rheMac3.chr4 T 83 C 0 s macFas5.chr4 169050372 44 - 170955103 --T------------------GACACCACACAGGGGCCGACGTGTCCCTCCTGTGACGTGTGTG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163868269 44 + 165299245 --T------------------GACACCACACAGAGGCCGACGTGTCCCTCCTGTGACGTGTGTG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96645958 45 + 98384682 TGT------------------GACACCACGT-GGGGCCCGTGTGTCCCTGCTGTGATGTGTGTG i chlSab2.chr13 T 82 C 0 s calJac3.chr4 169854385 46 + 171630274 TGT------------------GACCCCATGTGGGGGCTGGCGTGTCCCTGCTGTGACATGTGTG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56152868 33 + 122678785 I a score=121201.000000 s hg38.chr6_KB021644v2_alt 77081 64 + 185823 ACACCACGTG-GGG-CCGGCGTGTCCCTGCTGTGA--------------------------------------------------CATGTGT--------GTATCCCTGCCGTGATGTGTGACA s panTro4.chr6 170660225 65 + 172623881 ACACCACGCG-GGGGCCGGCATGTCCCTGCTGTGA--------------------------------------------------CATGTGT--------GTATCCCTGCCGTGATGTGTGACA i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156277972 64 + 157873769 ACACCACATG-AGA-CTAGTGTGTCCCTGCTGTGA--------------------------------------------------CATGTAT--------GTATCTCTGCCGTGATGTGTGACA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168094726 64 + 169853907 ACACCACGTG-GGG-CTGGTGTGTCCCTGCTGTGA--------------------------------------------------CATGTGT--------GTATCTCTGCCATGACGTGTGACA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169050416 64 - 170955103 ACACCACGTG-GGG-CTGGTGTGTCCCTGCTGTGA--------------------------------------------------CATGTGT--------GTATCTCTGCCATGACGTGTGACA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163868313 64 + 165299245 ACACCACATG-GGG-CTGGTGTGTCCCTGCTGTGA--------------------------------------------------CATGAGT--------GTATCTCTGCCATGACGTGTGACA i papAnu2.chr4 C 0 T 103 s chlSab2.chr13 96646003 64 + 98384682 ACACCACGTG-GGG-CCCGTGTGTCCCTGCTGTGA--------------------------------------------------CATGTGT--------GTATCTCTGCTGTGACGTGTGACA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169854431 123 + 171630274 ACCCCATGTGTGGG-CCAGCGTGTCCCTGCTGTGAGGTGTGACTCCATGTGTGGGCCAACGTGTCCCTGCTGTGAGGTGTGACTCCATGTGTGGGCCGGCGTGTCCCTGCTGTGAGGTGTGACT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56152868 33 + 122678785 I e ponAbe2.chr6 172410926 1579 + 174210431 I a score=3414.000000 s hg38.chr6_KB021644v2_alt 77145 2 + 185823 CC s panTro4.chr6 170660290 2 + 172623881 CC i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156278036 2 + 157873769 TC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168094790 2 + 169853907 CC i rheMac3.chr4 C 0 I 23 s papAnu2.chr4 163868274 2 + 165299245 CC i papAnu2.chr4 T 103 I 2 s chlSab2.chr13 96646067 2 + 98384682 CC i chlSab2.chr13 C 0 I 2 s calJac3.chr4 169854554 2 + 171630274 CC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56152868 33 + 122678785 I e ponAbe2.chr6 172410926 1579 + 174210431 I e macFas5.chr4 169050480 0 - 170955103 C a score=8650.000000 s hg38.chr6_KB021644v2_alt 77147 47 + 185823 ATGTGAGG-CCGGCGTGTCCCTGCTGTGAC--------------------------------------------GTGT---------------------GTATCTCAGCCATG s panTro4.chr6 170660292 47 + 172623881 ATGTGAGG-CCGGTGTGTCCCTGCTGTGAC--------------------------------------------GTGT---------------------GTATCTCAGCCATG i panTro4.chr6 C 0 T 163 s nomLeu3.chr3 156278038 92 + 157873769 ACGTGGGGACCAGCGTGTCCCTGCTGTGACGTGTGTGATACTACGTGGGGGCTGGTGCGTCCCTGCTGTGACATGTGT---------------------GTATCTCTGCCGTG i nomLeu3.chr3 C 0 C 0 s papAnu2.chr4 163868278 28 + 165299245 ACA-GAGG-CCGACGTGTCCCTCCTGTGAC----------------------------------------------------------------------------------- i papAnu2.chr4 I 2 C 0 s chlSab2.chr13 96646071 27 + 98384682 ACG-GGGG-CCAGCATG-CCCTGATGTGAT----------------------------------------------------------------------------------- i chlSab2.chr13 I 2 C 0 s calJac3.chr4 169854556 69 + 171630274 ATGTGGGGACCGGCATGTCCCTGCTGTGAC--------------------------------------------GTGTGTGACCCATGTATGGGCCGGCGTGTCCCTGCTGTG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56152868 33 + 122678785 I e rheMac3.chr4 168094792 23 + 169853907 I e ponAbe2.chr6 172410926 1579 + 174210431 I e macFas5.chr4 169050480 0 - 170955103 C a score=8981.000000 s hg38.chr6_KB021644v2_alt 77194 10 + 185823 GTGTGCGACC s panTro4.chr6 170660176 10 + 172623881 ATGTGCGACC i panTro4.chr6 T 163 C 0 s nomLeu3.chr3 156278130 10 + 157873769 ATGTGTGACA i nomLeu3.chr3 C 0 C 0 s papAnu2.chr4 163868306 10 + 165299245 GTGTGTGACA i papAnu2.chr4 C 0 I 61 s chlSab2.chr13 96646098 10 + 98384682 GTGAGCGACC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169854625 10 + 171630274 ATGTGTGACT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56152868 33 + 122678785 I e rheMac3.chr4 168094792 23 + 169853907 I e ponAbe2.chr6 172410926 1579 + 174210431 I e macFas5.chr4 169050480 0 - 170955103 C a score=-195.000000 s hg38.chr6_KB021644v2_alt 77204 6 + 185823 CCACAC---------------------------- s panTro4.chr6 170660186 6 + 172623881 CCACAC---------------------------- i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156278140 6 + 157873769 CCACAT---------------------------- i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169050480 6 - 170955103 CCTCAC---------------------------- i macFas5.chr4 C 0 I 19 s papAnu2.chr4 163868377 6 + 165299245 CCTCAC---------------------------- i papAnu2.chr4 I 61 I 19 s chlSab2.chr13 96646108 6 + 98384682 CCACAC---------------------------- i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169854635 34 + 171630274 CCATGTGTGGGCCGAAGTGTCCCTGCTGTGACAT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56152868 33 + 122678785 I e rheMac3.chr4 168094792 23 + 169853907 I e ponAbe2.chr6 172410926 1579 + 174210431 I a score=58528.000000 s hg38.chr6_KB021644v2_alt 77210 26 + 185823 --------------GGGGGCTGGTGTGTCACTGCTATGAC s panTro4.chr6 170660192 26 + 172623881 --------------GGGGGCTGGTGTGTCCCTGCTATGAC i panTro4.chr6 C 0 I 121 s nomLeu3.chr3 156278146 26 + 157873769 --------------GGGGGCTGGCGTGTCCCTGCCGTGAT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168094815 26 + 169853907 --------------GGGGGCTGGTGTGTCCCTGCTATGAC i rheMac3.chr4 I 23 C 0 s macFas5.chr4 169050505 26 - 170955103 --------------GGGGGCTGGTGTGTCCCTGCTATGAC i macFas5.chr4 I 19 C 0 s papAnu2.chr4 163868402 26 + 165299245 --------------GGGGGCTGGTGTGTCCCTGCTATGAT i papAnu2.chr4 I 19 C 0 s chlSab2.chr13 96646114 26 + 98384682 --------------GGGGGCTGGTGTGTCCCTGCTATGAC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169854669 40 + 171630274 GGGTGACTCCATGTGTGGGCTGGCGTGTCCCTGCTCTGAC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56152868 33 + 122678785 I e ponAbe2.chr6 172410926 1579 + 174210431 I a score=212234.000000 s hg38.chr6_KB021644v2_alt 77236 103 + 185823 GTGTGTGACACCACGCGGGGGCCA-----GTGTGTCCCTGCTGTGACCTGTGCGACACCATGCAGGTGCTGGCATGTCCCAGCCATGTGTCAGGCCACTGCTGTCTGT s panTro4.chr6 170660339 103 + 172623881 GTGTGTGACACCACGCGGGGGCCA-----GTGTGTCCCTGCTGTGACCTGTGTGACACCATGCAGGTGCTGGCATGTCCCAGCCATGTGTCAGGCCACTGCTGTCTGT i panTro4.chr6 I 121 C 0 s nomLeu3.chr3 156278172 78 + 157873769 GTGCGTGACCCCACACGGGGGCTG-----GTGTGTCCCTGCTGTGACGTGTGTGACA-------------------------CCATGTGTCAGTTCACTGCTGTCTGT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168094841 108 + 169853907 GTGTGTGACACTACGCGGGGGCCACGGCAGTGTGTCCCTGCCGTGACCTGTGTGACACCATGCAGGTGCTGGTGTGTCCCAGCCATGTGTCAGGCCACTGCTGTCTGT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169050531 108 - 170955103 GTGTGTGACACTACGCGGGGGCCACGGCAGTGTGTCCCTGCCGTGACCTGTGTGACACCATGCAGGTGCTGGTGTGTCCCAGCCATGTGTCAGGCCACTGCTGTCCGT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163868428 108 + 165299245 GTGTGTGACACTACGCGGGGGCCATGGCGATGTGTCCCTGCCATGACCTGTGTGACACCATGCAGGTGCTGGCGTGTCCCAGCCATGTGTCAGGCCACTGCTGTCTGT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96646140 108 + 98384682 GTGTGTGACACTACGTGGGGGCCATGGCAGTGTGTCCCTGCCGTGACCTGTGTGACACCAGGCAGGTGCTGGCGTGTCCCAGCCATGTGTCAGGCCACTGCTGTCTGT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169854709 103 + 171630274 GTGTGTGATACCATGTGGGGCCTG-----GCATGTCCCTGCTGTGACATGTGTGATACCATGTGGGTGCTGGTGTGTCCTGGCCATGTATCAGGCCACTGCTGTCTGT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56152868 33 + 122678785 I e ponAbe2.chr6 172410926 1579 + 174210431 I a score=1300734.000000 s hg38.chr6_KB021644v2_alt 77339 570 + 185823 CAGTATCACCCCAGAAGCTCAGCATGAAGACAGCATGGCTGCCTGAATTTATAGATGAGAAAATGAGGCTCAGCGTGGTGATCACCTTATGAAATCATGGGATACGATTTAAATGAGGGTTGGAGGAGGCATTTGAACAGTGTCACTGAGA-ACGTGGCATGACGCTGTGTCTGACCAGCAAATGCGAAGGTT-----------------------------TTATGTGGCTTGTGGACCCGTTTCAGGCTCTCCTGAGAGACGGTACCTGGGAGCAGTGGCCTGAAGCACCTCCTGGGGCCTCTAAGTCCCGTATCGAGTGGCCGGCGCCATGTCCCATCACTCAGGGTCTCCTTTAAGTGccgaacttcactgagtctgcagcactgtggattcaaagacagtctgttattttatgttccactaagaaagaaaatacactgccaagtacactaaagcagaatgcttctttctgatttggaagttttattttatatttatttaaagggttctttcaatgtattttgt-ggaatatctacatgtatatctacatacatctatctatttatacatagacttgtattatatattattgttttg s panTro4.chr6 170660442 571 + 172623881 CAGTATCACCCCAGAAGCTCAGCATGAAGACAGCATGGCTGCCTGAATTTATAGATGAGAAAATGAGGCTCAGCGTGGTGATCACCTTATGAAATCATGGGATACGATTTAAATGAGGGTTGGAGGAGGCATTTGAACAGTGCCACTGAGA-ACGTGGCATGACGCTGTGTCTGACCAGCAAATGCGAAGGTT-----------------------------TTATGTGGCTTGTGGACCCGTTTCAGGCTCTCCTGAGAGACGGTACCTGGGAGCAGTGGCCTGAAGCACCTCCTGGGGCCTCTAAGTCCTGTATCGAGTGGCCGGCGCCATGTCCCATCACTCAGGGTCTCCTTTAAGTGccgaacttcactgagtctgcagcactgtggattcaaagacagtctgttattttatgttccactaagaaagaaaatacactgccaagtacactaaagcagaatgcttctttctgatttggaagttttattttatatttatttaaagggttctttcaATGTATTTTATGGGAATATCAACATGTATATCTGCATACATCTATCTATTTATACATAGACTTGTATTATATATTATTGTTTTG i panTro4.chr6 C 0 I 1514 s nomLeu3.chr3 156278250 566 + 157873769 CAGTATCACCCCAGAAGCTCAGCATGAAGACAGCATGGCTGCCTGAATTTATAGATGCGAGAATGAGGCTCAGCGTGGTGATCGCCTTATGAAATCATGGGATACGACTTAAATGAGGGTTGGAGGAGGCATTTGAATGGTGTCACTGAGA-ATGTGGCATGACGCTGTGTCTGACCAGCAAATGCAAAGGTT-----------------------------TTATGTGGCCTGTGGACCTGTTTCAGGCTCTCCTGAGAGACGGTACCTGGGAGCAGGGGCCTGAAGCACCTCCTGGGGCCTCTAAGTCCTGTATCGAGTGGCCGGCGCCATGTCCCATTGCTTGGGGTCTCCTTTAAGTGccgaacttcactgagtctgcagcactgtggatacgaagacagtctgttattttatgatccactaagaaagaaaatacactgccaagtacattaaagcagagtgcgtctttctgacttggaagttttattttatacttatttaaagggttctctcaatgtattttgt-ggaatatctacatgtatatctacatac----atctgtttatacatagacttgtattatatattattgttttg i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168094949 570 + 169853907 CAGTATCACCCCAGAAGCTCAGCATGAAGACAGCACGGCTGCATGTATTTATAGATGAGAAAATGAGGTTCAGTGTGGTGTTCACCTTATGAAACCATGGGGTATGATTTAAATGAGGGTTGGAGGAGGCATTTGAATGGTGTCACTGAGA-ATGTGGCATGATGCTGTGTCTGATTAGCAAATGCGAAGGTT-----------------------------TTCTATGGCCTGTGGGCCCGTTTCAGGCTCTCCTGAGAGACGGTACCTGGGAGCAGGGGCCTTAAGCACCTCCTGGGGCCTCTAAGCCCTGTATCGAGTGGCTGGAGCCATGTCCCATTGCTCAGGGTCTACTTTAAGTAccgaacttcactgagtctgcagcactgtggattcaaagacagtccgttattttatgttccactaagaaagaaaatacagtgccaagtacactaaagcagaatgcttctttctgacttgaatgttttattttatatttatttaaagggttctttcagtgtattttgt-ggaatatctacaagtatatctacatacatctatctattcatacatagacttgtattgtatattattgttttg i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169050639 570 - 170955103 CAGTATCACCCCAGAAGCTCAGCATGAAGACAGCACGGCTGCATGTATTTATAGATGAGAAAATGAGGTTCAGTGTGGTGATCACCTTATGAAATCATGGGGTATGATTTAAATGAGGGTTGGAGGAGGCATTTGAATGGTGTCACTGAGA-ATGTGGCATGATGCTGTGTCTGATTAGCAAATGCGAAGGTT-----------------------------TTCTATGGCCTGTGGGCCCTTTTCAGGCTCTCCTGAGAGACGGTACCTGGGAGCAGGGGCCTTAAGCACCTCCTGGGGCCTCTAAGCCCTGTATCGAGTGGCTGGAGCCATGTCCCATCGCTCAGGGTCTACTTTAAGTGccgaacttcactgagtcagcagcactgtggattcaaagacagtctgttattttatgttccactaagaaagaaaatacagtgccaagtacactaaagcagaatgcttctttctgacttgaatgttttattttatatttatttaaagggttctttcagTGTATTTTGT-GGAATATCTACAAGTATATCTACATACATCTATCtattcatacatagacttgtattgtatattattgttttg i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163868536 570 + 165299245 CAGTGTCGCCCCAGAAGCTCAGCATGAAGGCAGCACGGCTGCATGtatttatggatgagaaaatgaGGTTCAGTGTGGTGATCACCTTATGAAATCATGGGGTATGATTTAAATGAGGGTTGGAGGAGGCATTTGAATGGTGTCACTGAGA-ATGTGGCATGATGCTGTGTCTGATCAGCAAATGCGAAGGTT-----------------------------TTCTACGGCCTGTGGGCCCGTTTCAGGCTCTCCTGAGAGACGGTACCTGGGAGCAGGGGCCTTAAGCACCTCCTGGGGCCTCTAAGCCCTGTATTGAGTGGCTGGAGCCATGTCCCATCGCTCAGGGTCTACTTTAAGTGCCAAACTTCACTGAGTCTGCAGCACTGTGGATTCAAAGACAGTCCATTATTTTATGTtccactaagaaagaaaatacagtgcCAAGTACACTAAagcagaatgcttctttttgacttggatgttttattttatatttatttaaagggTTCTTTCAGTGTATTTTGT-GGAATATCTACAAGTATATCTACATACATCTATCTATTCATACATACacttgtattatatattattgttttg i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96646248 565 + 98384682 CAGTATCACCCCAGTAGCTCAGCATGAAGACAGCATGGCTGCATGTATTTATGGATGAGAAGATGAGGTTCGGTGTGGTGATCACCTCATGAAATCATGGGGTATGATTTAAATGAGGGTTGGGGGAGGCATTTAAATGGTGTCACTGAGA-ATGTGGCATGACGATGTGTCTGATCAGCAAATGCAAAGGTT-----------------------------TTATACTGCCTGTGGGCCCGTTTCAGGCTCTCCTGAGAGACGGTACCTAGCAGCAGGGGCCTTAAGCACCTCCTGGGGCCTCTAAGCCCCATATCGAGTGGCTGGAGCCATGTCCCATCGCTCAGGGTCTACTTTAAGTGCCAAacttcactgagtctgcagcactgtggattcaaagacagtccgttatgttatgttccactaagaaagaaaatacagtaccaagtacactaaagcagaatgcttctttctgacttggatgttttattttatttttatttaaaggattctttcaatgtattttgt-ggaatatctacaagtatatctacatacatctatctatttatacatagacttg-----tatattattgttttg i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169854812 583 + 171630274 CAGCATCACCCCAGAAGCTCAGCATGAAGA---CATGGCTACACTAATTTACAGATGAGAAAATAAGGCTCAGCATGCTGAGCACCTGATGAAATCAGGGGATAAGGTTTAAATGAGGGTTGGAGGAGGCATTTGAATGGGGTCACTGAGA-ATGTGGCGTGGTGCTGTATCTCA-CAGCAAATGGGAAGGTTTTATGTGGGCTGTGGGCCCGTTTCAAGTCTTATGTGGGCTGTGGGCCCGTTTCAGGCTCTCCTGAGAGTCAGTACCCGGGATCAGGGG-CTGAAGCACCTCCTGGGGCCTCTGAGCCCCGAGTCGAGTGGCTGGCACAGTGTTCCATCGCTCAGGGGCTCCTTTAAGTCCCAAACTCAAGTgagtctgcggcactattgattc--agacagtctg-----ttatgtgccagtaagaaagaaaatacactgccaggtgcgctgagacag--tgattccttgtgacttggaagttttattttatacttatttaaggggttctttcagtgtattttgt-ggagtatctgtttgtctatctacatacatctaagtctttatac--agaattatattacatattattgttttg i calJac3.chr4 C 0 C 0 s canFam3.chr1 56152901 475 + 122678785 CAGCCCCAGCCCAGACGCTTGGGGTGAGGACAGCATCACCGCGGGAATTCATCCCTGAGAAAATGAGGCTGGCACAGCTACAAACCTCCTAAGTCCACGGGAGTTTATAGACAGGAGGG-------------------GGTCTCATCGAGGCATGTGGCTCAGTGGCGTGTCTGCCCAGCAAACGGGGAGCTT-----------------------------TCACCGGGATGGTGGGCTCCTCTGGGGCTGTCCTG------------------CAGAGG----------CTCCCGG----TC---------------GTGACGGGGTCTGTG-CCCATCATCCTGTTCCTGCTTC-GGTGCTT--CCCCATTGACTCCAGGGCACCGTCAA-GCAAAGATGTGCCATCATTT--------ACAGAGATGGACA--------CCCCATAAACTAACAAAACATATGTTTTATGATTTTGAATGTTTATTATTATACTTATC--AAGTGCTCT-TCAAtgtatttatt-gaaatatctc----tgtacctacataaacccacatatttagacatagatttatat--attattattattttg i canFam3.chr1 I 33 C 0 e ponAbe2.chr6 172410926 1579 + 174210431 I a score=449258.000000 s hg38.chr6_KB021644v2_alt 77909 210 + 185823 -aaatcacaggaaggacagtgaaagcgaacagtcttggtgaattcgggtttctataacaagctaccatta--accgggtggtttataaaaatcagaaatt---catttcc-------------catagttctaggggctgg-----aagtccaagcccaggacagcagaattatggggttcttgtgaggcccctctgcgaggttgcaaatggcgccttctcactgtgtctttat s panTro4.chr6 170662527 210 + 172623881 -AAATCACAGGAAGGACAGTGAAAGCGAACAgtcttggtgaattcgggtttctataacaagctaccatag--accgggtggtttagaaaaatcagaaatt---catttcc-------------catagttctaggggctgg-----aagtccaagcccaggacagcagcattgtggggttcttgtgaggcccctctgtgaggttgcaaacggcgccttctcactgtgtctttac i panTro4.chr6 I 1514 C 0 s nomLeu3.chr3 156278816 210 + 157873769 -aaatcacaggaaggacagtgaaagcgaacagtcttagtgaatttgggtttctataacaagctaccatag--actgggcggtttataaaaatcagaaatt---catttcc-------------catagttctgggggctgg-----aagtccaagcccagggcagcagcgtggtggggttctggtgaggcccctctgcgaggttgcagacggcgccttctcactgtgtcttcac i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168095519 209 + 169853907 -aaatcacaggaagaacagtgaaagctaagcgtcttagtgagttcaggtttctataacaagataccatag--accagatggtttataaaaa-cagaaatt---catttcc-------------catagttctgggggctgg-----aagtccaagcccagggcagctgcatggtgaggttctggtgaggcccctctgcaaggttgcagatggtggcttctcactgtgtcttcac i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169051209 209 - 170955103 -aaatcacaggaagaacagtgaaagctaagcgtcttagtgagttcaggtttctataacaagataccatag--accagatggtttataaaaa-cagaaatt---catttcc-------------catagttctgggggctgg-----aagtccaagcccagggcagctgcgtggtggggttctggtgaggcccctctgcaaggttgcagacggtggcttctcactgtgtcttcac i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163869106 209 + 165299245 -AAATCACAGGAAGAACAGTGAAAGCTAAGCGTCTTAGTGAGTTCGGGTTTCTATAACAAGCTACCATAG--ACCAGGTggtttataaaaa-cagaaatt---catttcc-------------catagttctgggggctgg-----aagtccaagcCCAGGGCAGCCGTGTGGTGGGGTTCTGGTGAGGCCCCTCTGTGAGGTTGCAGACGGCggcttctcactgtgtcttcac i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96646813 209 + 98384682 -aaatcacaggaagaacagtgaaagctaagagtcttagtgagttcgggtttctataacaagctaccgtag--agcaggtggtttataaaaa-cagaaatt---catttcc-------------catagttctgggggctgg-----aagtccaagcccagggcagccgcctggtggggttctggtgaagcccctctgtgaggttgcagacggccgcttctgactgtgtcttcac i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169855395 208 + 171630274 -aaaccacaaaaaggacagtggaagctaagagttttagtgaattcgggtttctataaaaaactactatag--acagggaggtttataaaaaacagaaatt---cttttct-------------cattgttctgggggctgg-----aagtccgagcccagggcggcagcctggtggggctccggtgagg-ccctctgtgagcctgcgaatggcgcc-tctcactgtgtcttcat i calJac3.chr4 C 0 C 0 s canFam3.chr1 56153376 185 + 122678785 aaaagcata-aaaggacagtgtaagacatgtaagttggtgaa---ggtcttataaaacatattcacagggcacctgggtggtt---------cagtggttgagcgtttgcctttcggctcaggcctgatcctggggtcctgggatcaagtccaaggtcagg-----------------------------ctccctgcatgg-------agcctgcttctccctctgcctgtgt i canFam3.chr1 C 0 I 50 e ponAbe2.chr6 172410926 1579 + 174210431 I a score=322665.000000 s hg38.chr6_KB021644v2_alt 78119 151 + 185823 gtggtggaggggagaagatctctgaggtcccttttgtaagggcgctaaccccattcaccagggcttcactctcatgaccccatcacctccccaagaccccacctcctcgcccattgatat-ggggtgaggattttagtattgggatttgggg s panTro4.chr6 170662737 151 + 172623881 atggtggaggggagaagatctctgaggtcccttttgtaagggcgctaaccccattcaccagggcttcactctcatgaccccatcacctccccaggaccccacctcctcgcccattgatat-ggggtgaggattttagtgttgggatttgggg i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156279026 151 + 157873769 gtggtggaggggagaagagctctgaggtcccttttgaaagggcgctaaccctgttcaccagggcttcactctcatgaccccatcacctccccaagaccccacctccttgcccattgatat-ggggtgaggatttcagtattgggatttgggg i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168095728 150 + 169853907 gtggtggaggggagaagagctcggaggttccttttataaggacacaaaccct-ctcaccagggcttcactctcatgaccctgtcacttccccaagatcccacctcctctcccattgatat-ggcgtgaggatttcagtattgggatttgcgg i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169051418 149 - 170955103 gtggtggaggggagaa-aactcggaggttccttttataaggacacaaaccct-ctcaccagggcttcactctcatgaccctgtcacttccccaagatcccacctcctctcccattgatat-ggcatgaggatttcagtattaggatttgcgg i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163869315 150 + 165299245 gtgGTGGAGGGGAGAAGAGCTCGGAGgttccttttataaggacactaacccT-TTCACCAGTGCTTCACTCTCATGACCCCGTCACTTCCCCAAGATCCCACCTCCTTTCCCATTGATAT-GGCGTGAGGATTTCAGTATTGGGATTTGCAG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96647022 150 + 98384682 gtggtggaggggagaagagctcggaggttccttttataaggacactaaccct-ttcaccagtgcttcactctcatgaccccgtcacttccccaagatcccacctcctctcccattgagat-ggtgtgaggatttcagtattgggatttgcgg i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169855603 152 + 171630274 gtggtggaaagggagagagctcagaggccccttttataagggcactaaccctgttcaccagggcctcaccctcatgacctcgtcacctgcccaagatcctacctcctgtctcattgatatgggggtgaggatgtcagtattgggatttgggg i calJac3.chr4 C 0 C 0 e canFam3.chr1 56153561 50 + 122678785 I e ponAbe2.chr6 172410926 1579 + 174210431 I a score=151523.000000 s hg38.chr6_KB021644v2_alt 78270 77 + 185823 gaacacaaacatgcagaccataccgttgagtgaatccattagggtattacgaacacacatttacattcagagtacaa s panTro4.chr6 170662888 77 + 172623881 gaacacaaacatgcagaccataCCGTTGagtgaatccattagggtattacgaacacacatttacattcagagtacaa i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156279177 70 + 157873769 gaacacaaacatgcagaccacac-------tgagtccattagggtattaggaaaacacgtttacattcggagtACAA i nomLeu3.chr3 C 0 I 238 s rheMac3.chr4 168095878 77 + 169853907 gaacacaaacatgctgaccataccattaagtgaatccattagggtattacgaaaacatatttccattcagagtacaa i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169051567 77 - 170955103 gaacacaaacatgctgaccataccattaagtgaatccattagggtattacgaaaacatatttccattcagagtacaa i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163869465 77 + 165299245 GAACACAAACATGCCGACCATACCATTAAGTGAATCCATTACGGTATTACGAAAACACATTTACATTCAGAGTACAA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96647172 77 + 98384682 gaacacaaacatgcagaccataccattaagtgaatccattagggtattacgaaaacacatttacattcagagtacaa i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169855755 73 + 171630274 gaacacacacatgcagtccacacagctgagtgaattgattaggatatcaggggaacatattcaca----gagcgcaa i calJac3.chr4 C 0 C 0 s canFam3.chr1 56153611 35 + 122678785 aaaaaTAAACA------------------------------------------AGCACATTCACATTCAGGTCCCAG i canFam3.chr1 I 50 C 0 e ponAbe2.chr6 172410926 1579 + 174210431 I a score=465015.000000 s hg38.chr6_KB021644v2_alt 78347 220 + 185823 -------------------tagtgtcatgaatgcccatggctttccaggtaaccatggctatgggccctgaaag-agcgtttaagatccagtgtttctcagcggaggagccgccactgcagctccaacatcctccccgccaccgacgccggctctgtgagtttcaatgcttcggatttctcgtgct---agaagcaggcatccctttcagcaatagcgaggaatc-------tgatgccttcctggtttg s panTro4.chr6 170662965 220 + 172623881 -------------------tggtgtcatgaatgcccatggctttccaggtaaccatggctatgggccctgaaag-agcgtttaagatccagtgtttctcagcggaggagccgccactgcagctccaacatcctccccgccaccgacgccggctctgtgagtttccatgcttcggatttctcgtgct---agaagcaggcatccctttcagcaatagcgaggaatc-------cgatgccttcctggtttg i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156279485 218 + 157873769 -------------------TGGTgtcgtggatgcccatggctttccaggtaaccgcggctgtgggccctgaaag-agcgtttgagat-cagtg-ttctcagagcaggagctgccactgccgctccaacatcctccccgccaccgacgccggctctgtgagtttcgctgcttcggatttctcaagct---agaagcaggcatccctttcagcaatagcgaggaatc-------cgatgccttcctggtttg i nomLeu3.chr3 I 238 C 0 s rheMac3.chr4 168095955 220 + 169853907 -------------------tggtgtcatgaatgcccctggctttccaggtaaccgtggctacgggccatgaaaa-agtgtttgagatccagtgtttctcagaggaggagccgccaccgcggctccactgtcctcccagccaccaatgcaggctctgtaagtttcgatgcttcggatttcttaagct---agaagcaggcatccatttcagcaatagcaagcaatc-------cgatgtcttcctactttg i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169051644 220 - 170955103 -------------------tggtgtcatgaatgcccctggctttccaggtaaccgtggctacgggccgtgaaaa-agtgtttgagatccagtgtttctcagaggaggagccgccactgcggctccactgtcctcccagccaccaatgcaggctctgtaagtttcgatgcttcggatttcttaagct---agaagcaggcatccatttcagcaatagcaagcaatc-------cgatgtcttcctactttg i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163869542 223 + 165299245 -------------------TGGTGTCATGAATGCCCCTGGCTTTCCAGGTAACCGTGGCTACAGGCCGTGAAAG-AGTGTTTGAGATCCAGTGTTTCTCAGAGGAGGAGCCACTACTACAGCTCCAACGTCCTCCCAGCCACCAACGCAGGCTCTGTAAGTTTCGATGCTTCGGATTTCTTAAGCTAGAAGAAGCAGGCATCCATTTCAGCAATAGCAAGCAATC-------CGATGCCTTCCTAGTTTG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96647249 220 + 98384682 -------------------tggtgtcatgaatgcccctggctttccaggtaaccgtggctacgggccgtgaaag-agtgtttgagatccagggtttctcagaggaggagccaccactggggctccaacatcctcccagccaccaacgcaggctctgtaagtttcgatgcttcggatttcttaagct---agaagcaggcatccatttcagcaatagcaaggaatc-------caatcctttcctagtttg i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169855828 219 + 171630274 -------------------tggtgtcgtgaaggcccaaggctttccacataaccatggccacggagcctggaag-agcgttggagatctgctgtttgtcagcg-agtagctgccactgcagctccaacgtcctcccagacactgccacctgctctgcaagttcccatgctttggattcctcaggct---agaagcaggcgtccatttcagccacagcgaggaatc-------cgacgccttgctagtttg i calJac3.chr4 C 0 C 0 s canFam3.chr1 56153646 226 + 122678785 TCATTGCCACCACACTGGACTGAGCCACAGAGGCCTGTG--TTTCCTGCGTACCGTGGCTGCCCTCCGTGGCGGCAGTGCCTTGGA--CAGCATTTATTAGGAGAGACTCTGCCCCTGTGGCCACAGGGTGGGCCCTGCCGCTGATGCATCCTCCGAGAGCT-CAGTGCTGCGGCTTCCCCTAGCT-------------------CACAGCCGTCGAGGGGATTCCTCGAAGCGCTGCCCTCCTCAGATG i canFam3.chr1 C 0 C 0 e ponAbe2.chr6 172410926 1579 + 174210431 I a score=842748.000000 s hg38.chr6_KB021644v2_alt 78567 324 + 185823 ggccttggaagctttgctgactgcaacatctacgggttgcacctgttcagccaggccaccaggaataacccccaaga-------gctgcc---tgtccagcga-gctACAGCAGACCTGGCGGAACAGTCTCCATACGGGAAATAAGAGGCCTT--GCCTGTGAAGTGCACCCTAACACGTGGGGGACGATAAGAGATGGAAAATTGTGTATCCCAGGACCGAAGACGTATGGTC-ACTCAGGACCCACTAAAGCTGATATTTTATCAGGAGCAAAAATAGAAAATGAGACATTATTCCAATTGTATTTTATATAATACAAACTGCTGGGAACATGTG s panTro4.chr6 170663185 324 + 172623881 ggccttggaagctttgctgactgcagcatccaggggttgcacctgttcagccaggccaccaggaataacccccaaga-------gctgcc---tgtccagcga-gctACAGCAGCCCTGGCGAAACAGTCTCCATACAGGAAATAAGAGGCCTT--GCCTGTGAAATGCACCCTAACACGTGGGGGACGATAAGAGATGGAAAATTGTGTATCCTAGGACCGAAGACGTATGGTC-ACTCAGGACCCACTAAAGCTGATATTTTATCAGGAGTAAAAATAGAAAATGAGACATTATTCCAATTGTATTTTATATAATACAAACTGCTGGGAACATGTG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172412505 320 + 174210431 GGccttggaagctttgttgactgcaatgtccaggggttgcacctgttccgcctggcaaccaggaataatccccaagA-------GCTGCC---TATCCAGTGATTCTACAGCAGCCCTGGCAAAACAGTCTCCATACAGGAAATAAGAGGCCTT--GCCTGCGAAATGCACCCTA--ACGTGGGGGAAGATAAGAGATGGAAAATTGTGTATCCCAGGAACAATGACATATGGTC-ACTCAGGACCCACTAAAGCTGATATTTTCTCAGGAGCAAAAATAGAAAACGAGACATTATTCCAATTGTATTTTATATAATACAAACTGCT---CACATGTG i ponAbe2.chr6 I 1579 C 0 s nomLeu3.chr3 156279703 314 + 157873769 gggcttggaagctttgttgactgcaacgtccaggggttgcacctgttcggccaggccaccaggaataacctccaagA-------GCTGCC---TGTCCAGCGA-GCTACAGCAGCCCTGGCAAAACAGTCTCCATACGGGAAAT--GAGGCCTT--GCCTGTGAAATGCACCCTAACACATGGGGGAAGATAAGAGATGGAAAATTGTGTATCCCAGGACTGATGGCGTATGGTC-ACTCAGGACCCACTAAAGCTGATATT-----AGGAGCAAAGATAGAAA---AGACATTATTCCAGTCGTATTTTATATAATACAAACCGCTGGGAACATGTG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168096175 305 + 169853907 ggccttggaagctttgttgactgcagtgtccagggattgcacccgtttggccaggccaccaggaataacccccaagc-------actgcc---tgtccagcga-gcAACAGCGGCCCTGGAAGAATGGTCTCCAGACAGGAAACAAGAGGCCTT--GCTTGTGAAATGCACCTTAACACATGGGGGAAGATAAGAGATGGAAAACTGTGTA-------------AATGTGTGGTC-ACTCAGGACCCACTAAAGCTGATATTTTATCAGGAGCAAAAATAGAAAATGAGACATT------ATTGTATTTTATATAATATGAACTGCTGGGAACATGTG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169051864 305 - 170955103 ggccttggaagctttgttgactgcagtgtccagggattgcacccgtttggccaggccaccaggaataacccccaagc-------actgcc---tgtccagcga-gcAACAGCGGCCCTGGCAGAATGGTCTCCAGACAGGAAACAAGAGGCCTT--GCTTGTGAAATGCACCTTAACACATGGGGGAAGATAAGAGATGGAAAACTGTGTA-------------AATGTGTGGTC-ACTCAGGACCCACTAAAGCTGATATTTTATCAGGAGCAAAAATAGAAAATGAGACATT------ATTGTATTTTATATAATATGAACTGCTGGGAACATGTG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163869765 304 + 165299245 GGCCTTGGAAGCTTTGTTGACTGCAGTGTCCAGGGGTTGCACTCGTTCGGCCAGGCCACCAGGAATAACCCCC-AGC-------ACTGCC---TGTCCAGCGA-GCGACAGCGGCCCTGGCAGAACGGTCTCCAGACAGGAAATAAGAGGCCTT--GCTTGTGAAATGCACCTTAACACATGGGGGAAGATAAGAGATGGAAAACTGTGTA-------------AACGTGTGGTC-ACTCAGGACCCACTAAAGCTGATATTTTATCAGgagcaaaaatagaaaatgagacatt------attgtattttatataatatgaacTGCTGGGAACATGTG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96647469 311 + 98384682 ggccttggaagctttgttgactgcagcgtccaggggttgcacccgtttggccaggtcaccaggaataacccccaagc-------actgcc---tgtccagcga-gcaacagcagccctggcaaaacggtctccagacaggaaataagaggcctt--gcttgtgaaatgcaccTTAACACATGGGGGAAGATAAGAGATGGAAAACTGTGTA-------------AACCTGTGGTC-ACTCAGGACCCACTAAAGCTGATATTTTATTGGGAGCAAAAATAGAAAACCAGACATTATTCCAATTGTATTTTGTATAATATGAACTTCTGGGAACATGTG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169856047 306 + 171630274 ggcctcggaagctttg-tgactgagacgtccagcggtggcgcctgtggggccaggccaccaggaataa-ccctaagt-------gctgcc---tgcacagcga-gcgacagcaacTCTGGCAAAATGGACCGCATGCAAGAAATAAGAGGCCTG--GCTTGCAAAAGGCACCCTCACACGTCGGGGGCGGTGACAGATGGAAGATGGTTTGTCCCAGGACTGA-CATGTATAGTC-ACTCAGG---------------TATTTTATCAGGAGCAAAAATAGAAAATGAGACAGCATTCCAACTGTATTTTATATAATACAGACCACTGGGAGCAGGTG i calJac3.chr4 C 0 C 0 s canFam3.chr1 56153872 330 + 122678785 GGCCTTCCCAGGCTTG-TGCCTGAAGCGTCCAGAGGTCACTCACATTCAGCTAGGCCTGCCAGGCTGACCCCCAGGCCCCTGGGGCTGACCTTTGTGCAGCGG-GAGGAGACCAGCCTGTCACAGCTGTCCCTGCACAGACGACGATCCATCCTGAGTTTGTGAA-TGTACCCTCACAGCTGGGG--AGGTCAACTATGGGAGATGATGCCTCATAGGCCT---GATGCATGGGCTGCTCCATCCTTCTTGGAACTGACATTTTATAAGGAGTGGAAATAGAAACAGAAACGTCACTGCAACTGCCTTTGGGGTGTGACAGAGTGTGGGGAGCATGTG i canFam3.chr1 C 0 I 1010 a score=3632922.000000 s hg38.chr6_KB021644v2_alt 78891 1317 + 185823 GGAACTTGCACATTTGGGATGTCCTCTGCCAGGTCTTTGGCCTTTTGTTTTTGGGGTGTATGTAAAATCTAAGTCATCATCGTTAGGGAACTGGACACCTCAGCCTCTCTCTATCTGGTTCTGTTGTCAAGAAAGCCGTGGAAAAGGTAAAATCTTAGGGCGTGAGGGGCCTGAGGGTTC------------------------------------------------------------------------------------CGTGAGTGAGGTGTGAATGAGCTGGTGCCTACACACATTGCTGGTGGTGAAGCAACAGCAAACAGTCACCTCGGGGGCTGTTCATCCTCCAGCAGTGACACTGTGACCCGTGACCACTGCACAGGGTTCCATGTAAGAAAAAGCATCCAGGCAGAGGCCCTGGTGAGCCGTTGGATAGTCAACATTCGCTTGGAGAAGTTTGCTACACTCAGGCCAGACCAACTGCTAGAAGCAACTGCCTGGCTACATTTTTGTTTTTATGTTTGGAAAGACAAAGGTAAAGCCGTGGGGAGCGAGATCGGTCTGGATAAGGCCCAGATCCTCAAGAACAGACCCCAGGAGTGTCAGGGGAGAAGGATGTGTGAGTTAACGTCGCTGTGATGCAAGCTGCCGTCTCATTCTGCACAAGG-TGAAAAGGGCGGAGTGAATCACTGAAGCCACTTAGGAGCCTTTTGTCTGGGAAAAAACAAAATCGGTCTGTTCAGTAGACTGACCCTTGA----CAGTCTAGAGAGAAAATGTGTCTGCAGCTGCAGTATTCTGCGTGAGTTCCTCACACAGGGCTTCCCAATTAATGTTGCTGATTGACTGATCAAAAAACCATCTGGCACAGATGCTCTTACTGCACACTCGATGAGCGGCTGCTTCTTCCTCGCCCTTCCTCAGCCTGAGGAACTGCACAGAGCTTTCTTCTAGATTTGTTCTTTCGGAAGACAAGAAACCACCCTGTGGAGAGATGTCTATCCGATCACTGCACATCgtattagtccattctcatgctgctataaggatatatctaagactgggtaatttataaataaaagaggtgtaattgactcacagtgcagcatggctggggaagcctcaggaaacttaacaatcacggcagaaggagaagcaaacacatccttcttcacatggcagcagcaaggagaagggccaaagcactgagcaaa--atgggagaaagccccttataaaaccatcagatcttgtgagaactcactcactatcatgagaacagcatgagggtcaccattcccatgattaaattat-cccccccccaccttctccctcccacaacacatggggattatgggaactacaattcaagatgagattcgggtggggacacagcaaaac s panTro4.chr6 170663509 1316 + 172623881 GGAACTTGCACATTTGGGATGTCCTCTGCCAGGTCTTTGGCCTTTTGTTTTTGGGGTGTATGTAAAATCTAAGTCATCATCGTTAGGGAACTGGACACCTCAGCCTCTCTCTATCTGGTTCTGTTGTCAAGAAAGCCGTGGAAAAGGTAAAAACTTAGGGCGTGAGGGGCCTGAGGGTTC------------------------------------------------------------------------------------CGTGAGAGAGGTGTGAATGAGCTGGTGCGTACACACATTGCTGGTGGTGAAGCAACAGCAAACAGGCAACTCGGGGGCTGTTCATCCTCCAGCAGTGAAACTGTGACCCGTGACAACTACACAGGGTTCCATGTAAGAAAAAGCATCCAGGCAGGGGCCCTGGTGAGCCGTTGGATAGTCAACATTCTTTTGGAGAAGTTTGCTACACTCAGGCCAGACCAACTGCTAGAAGCAACTGCCTGGCTACATTTTCGTTTTTATGTTTGGAAAGACAAAGGTAAAGCCGTGGGGAGCGAGATCGGTCTGGATAAGGCCCAGATCCTCAAGAACAGACCCCAGGAGGGTCAGGGAAGAAGGATGTGTGAGTTAACGTCGCTGTGATGCAAGCTGCCGTCTCATTCTGCACAAGG-TGAAAAGGGCGGATTGAATCACTGAAGCCACTTAGGAGCCTTTTGTCTGGGAAAAAACAAAATCGGTCTGTTCAGTAGACTGACACTTGATAGTCAGTCTAGAGAGAAAATGTGTCTGCAGCTGCAGTATTCTGCTTGAGTTCCTCACACAGGGCTTCCCAATTAATGTTGCTGATTGACTGATCAAAAAACCATCTGGCACAGATGCTGTTACTGCACACCCGATGAGTG---GCTTCTTCCTCACCCTTCCTCAGCCTGAGGACCTGCACAGAGCTTTCTTCTAGATTTGTTCTTTCGGAAGACAAGAAACCACCCTATGGAGAGATGTCTATCCGATCACTGCACATCgtattagtccattctcatgctgctataaggatatatctaagactgggtaatttataaataaaagaggtgtaattgactcacagttcagcatggctggggaagcctcaggaaacttaacaatcacagcagaaggagaagcaaacacatc---cttcacgtggcagcagcaaggagaagggctgaagcactgagcaaa--atgggagaaagccccttataaaaccatcagatcttgtgagaactcactcactatcatgagaacagcatgagggtcaccacccccgtgattaaattatccccccccccaccttctccctcccacaacacatggggattatgggaactacaattcaagatgagatttgggtggggacacagcaaaac i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172412825 1307 + 174210431 GGAGCTTGCACATTTGGGATGTCCTCTGCCAGGTCTTCAGCCTTTTGTTTTTGGGGTGTATGTAAAATCTAAGTCATCATCATTAGGGAACTGGACACCTCAGCCTCTCTCTATCTGGTTCTGTTGTCAAGAAAGCCGTGGAAAAGGTAAAAACTTAGGGCTTGAGGGGCCTGAGGGATC------------------------------------------------------------------------------------CATGAGAGAGGTGTGAATGAGCTGGTGCATACACACATTGCTGGTGGTGAAGCAACAGCAAACAGGCAACTCGGGGGCTGTTCATCCTTCAGCAGTGAAACTGTGACCTGTGACCACTGCCCAGGGTTCCATGTAAGAGAAAGCATCCAGGCAGAGGCCCTGGTAAGCCGTTCAATAGTCAACGTTCTCTTGGAGAAGTTTGTTACACTCAGGCCAGACCAAGTGCTAGAAGCAACTGCCCGGCTACATTTTTGTTTTTATGTTTGGAAAGACAAAGGTAAAGCCATGGGGAGCGAGATCGGTCTGGATAAAGCCCAGATCCTGGAGAACAGACCCCATGTGGGTCAGGGGAGAAGCACGTGTGAGTTAACGTTGCTGTGATGCAAGCTGCTGTCTCATTCTGCACAAGGATGAAAAGGGCAGATTGAATCACTGAAGCCACTT---AGCCTTTTGTCTGGGAAAAAACAAAATCGGTCTGTTCAGTAGACTGACACTTGATAGTCAGTCTAGAGAGAAAATGTGTCTGCAGCTGCAGTATTCTGCTTGAGTTCCTCACACAGGGCTTCCCAATTAATGTTGCTGATTGATTGATCAAAAAACCATCTGGCACAGATGTTGATACCGCACACCCAATGAGCA---GCTGCTT-------CTTCCTCAGCCAGAGGACCTGCACAGAGCTTTCTTCTAGATTTGTTCTTTTGGAAGACAAGAAACCACCCTATGGAGAGATGTCTATCCGATTACTGCACATtgtattagtccattctcatgctgctataaggatatatctaagactgggtaatttataaatgaaagaggtgtaattgactcacagtttagcatgactggggaagcctcaggaaacttaacaatcacggcagaaggagaagcaaacacgtccttcttcacatggcggcagcaaggagaagtgccgaagcgctgagcaaa--acgggagaaagtcccttataaaaccatcagatcttgtgagaactcactcactatcatgagaacagcatgagagtcaccacccccatgattaaattac---ccccctcaccttcgccctcccacgacacatggcgattatgggaactacaattcaagatgagatttgggtggggacacagcgaaac i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156280017 1318 + 157873769 GGAGCTTGCACACTTGGGATATCCTCTGCCAGGTCTTCGGCCTTTTGTTTTTGGGGTGTATGTAAAATCTAAGTCATCATCGTTAGGGAACTGGACAACTCAGCCTCTCTCTGTCTGGTTCTGTTGTCAAGAAAGCCATGGAAAAGGTAAAAACTTAGGGCTTGAGGGGCCTGAGAGTTC------------------------------------------------------------------------------------CATGAGAGAGGTGTGAATGAGCTGGTGCATACACACATTGCTGGTGGTGAAGCAACAGCAAACAGGCAACTCGGGGGCTGCTCATCCTTCAGCAGTGAAACTGTGACCCGTGACCACTGCTCAGGGTTCCATGTAAGAGAAAGCATCCAGGCAGAGGCCTCGGTGAGCCGTTCGATAGTCAACGTTCTCTTGGAGAAGTTTGCTACACTCAGGCCAGACCAAGTGCTAGAAGCAACTGAGTGGCTACATTTTTGTTTTTATGTTTGGAAAGACAAAGGTAAAGCCGTGGGGAGTGAGAGTGGTCTGGATAAAGCTGAGATCCTGGAGAACAGACCCCATGAGGGTCAGGGGAAAAGCATGTGTGAGTTAACGTCGCTGTGATGCAAGCTGCCGTCTCATTCTGCACAAGG-TGAAAAGGGCGGATTGAGTCACTGAAGCCACTTAGGAGCCTTTTGTCTGGGAAAAAACAAAATCGGTCTGTTCAGTAGACTGACACTTGCTAGTCAGTCTAG-GAGAAAATGTGTCTGCAGCTGCAGTATTCTGCTTGAGTTCCTCAC-CAGGGCTTCCCAATTAATGTTGCTGATTGACTGATCAAAAAACCATCTGGCACAGATGCTAATACTGCACACCCAATGAGCGGCTGCTTCTTCCTCACCCTTCCTCAGCCAGAGGACCTGCACAGAGCTTTCTTCTAGATTTGTTCTTTTGGAAGACAAGAAACCACCCTATGGAGAGATGTCTATCCGATCACTGCACATCgtattagtcaattctcatgctgctataaggacatatctaagactgggtaatttataaatcaaagaggtgtaattgactcacagttcagcatggctggggcagcctcaggaaacttaacagtcacggcagaaggagaagcaaacatgtcctttttcacatggcagcagcaaggagaagggctgaagcactgagcaaa--acgggagaaagccccttataaaaccatcagatcttgtgagaactcactcactgtcatgagaacagcataagggtcaccacccccatgattaaattat--ccccccccaccttctccctcccacgacacatggggattatgggaactacaattcaagatgagatttgggtggggacacagcgaaac i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168096480 1305 + 169853907 GGAACTTGCACATTTGAGATGTCCTCTGCCAGGCCTTTGGCCTTTTGCTTTTGGGGTGTATGTAAAATCTAAGTCATCATTGTTAAGGAACTGGACACCTCAGCCTCTCTCTATCTGGTTCTATTGTCAAGAAAGCCATGGAAAAGGTAAAAACTTAGGGCTTGAGGGGTCTGAGGGTTC------------------------------------------------------------------------------------CATGAGAGAGGTGTGAATGAGCTGGTGCGTACACATATTGCCGGTGGTGAAGCAACAGCAAACAGGCAACTCGGAGGCTGTTCATCCTTCAGCAGTGACACTGTGACCCGTGACCACTACTCAGGATTCCATGTAGGAAAAAGCATCCCGGCAAAGGCCCTGGTGAGCCGTCCGATAGTCAATGTGCTCTTGGAGAAGTTTGCTACACTCAGGCCAGACCAGGTGCTAGAAGCAACTGCCTGGCTACATTTTTGTTTTTATGTTTGGAATGACAAAGGTAAAGCCAGGGGGAGTGAGATCGGTCTGGATAAAGCCCAGATCCTGGAGAACAGGCCCTGTGAGGGTCAATGGAGAAGCACGTGTGAGTTAAGGTCGCTGTGATGCATGCTGCCGTCTCATTCTGCACAAGG-TGAAAAGGGCAGATTGAATCACCGAAGCCACTCAGGAGCCTTTTGTCTGGGAAAAAACAAAATCGGTCTGTTCAGTAGACTGACACTCGA----TAGTCTAGAGACAAAATGTGTCTGCAGCTCTGGTATTCTGCCTGAGTTCCTCACACAGGACGTCCCAATTAATGTTGCTGATTGACTGATCAAAAAACCATCTGGCATAGATGCTGATACCGCAGACCCGATGGGTGGCTGCTTCTTCCCCACCCTTCCTCAGCCAAAGGACCTGCACAGAGCTTTCTTCTAGATTTGTTCTTTCGGAAGATGAGAAGCCACCCTATGGAGAGATGTCTATCCAATCATTGCACATtgtattagtccattttcatgctgctataaggatatatctaagactaggtaatttataaatgaaagaggtgtaattgactcacagctcagcatggctggggaagcctcaggaaactt-acaatcgtggcagaaggagaagcaaacacgtccttcttcacatg---gcagcaaggagaaatgtcaaagcacagagcaaa--a-gggggaaagccccttataaaaccatcggaacttgtgaggactcactcactctcatgagaacagcatgagggtcaccactcccgtgattaaattac------ccccacctcctccctcc--cgacacacggggattatgggaactacaattcaagatgagatttgggtggggacacggccaaac i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169052169 1305 - 170955103 GGAACTTGCACATTTGAGATGTCCTCTGCCAGGCCTTTGGCCTTTTGCTTTTGGGGTGTATGTAAAATCTAAGTCATCATTGTTAAGGAACTGGACACCTCAGCCTCTCTCTATCTGGTTCTATTGTCAAGAAAGCCATGGAAAAGGTAAAAACTTAGGGCTTGAGGGGTCTGAGGGTTC------------------------------------------------------------------------------------CATGAGAGAGGTGTGAATGAGCTGGTGCGTACACATATTGCCGGTGGTGAAGCAACAGCAAACAGGCAACTCGGGGGCTGTTCATCCTTCAGCAGTGACACTGTGACCCGTGACCACTACTCAGGATTCCATGTAGGAAAAAGCATCCCGGCAAAGGCCCTGGTGAGCCGTCCGATAGTCAATGTGCTCTTGGAGAAGTTTGCTACACTCAGGCCAGACCAGGTGCTAGAAGCAACTGCCTGGCTACATTTTTGTTTTTATGTTTGGAATGACAAAGGTAAAGCCAGGGGGAGTGAGATCGGTCTGGATAAAGCCCAGATCCTGGAGAACAGGCCCTGTGAGGGTCAATGGAGAAGCACGTGTGAGTTAAGGTCGCTGTGATGCATGCTGCCGTCTCATTCTGCACAAGG-TGAAAAGGGCAGATTGAATCACTGAAGCCACTCAGGAGCCTTTTGTCTGGGAAAAAACAAAATCGGTCTGTTCAGTAGACTGACACTCGA----TAGTCTAGAGAGAAAATGTGTCTGCAGCTCTGGTATTCTGCCTGAGTTCCTCACACAGGACGTCCCAATTAATGTTGCTGATTGACTGATCAAAAAACCATCTGGCACAGATGCTGATACCGCAGACCCGATGGGTGGCTGCTTCTTCCCCACCCTTCCTCAGCCAAAGGACCTGCACAGAGCTTTCTTCTAGATTTGTTCTTTCGGAAGATGAGAAGCCACCCTATGGAGAGATGTCTATCCAATCATTGCACATtgtattagtccattttcatgctgctataaggatatatctaagactaggtaatttataaatgaaagaggtgtaattgactcacagctcagcatggctggggaagcctcaggaaactt-acaatcgtggcagaaggagaagcaaacacgtccttcttcacatg---gcagcaaggagaaatgtcaaagcacagagcaaa--a-gggggaaagccccttataaaaccatcggaacttgtgaggactcactcactctcatgagaacagcatgagggtcaccactcccgtgattaaattac------ccccacctcctccctcc--cgacacacggggattatgggaactacaattcaagatgagatttgggtggggacacggccaaac i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163870069 1295 + 165299245 GGAACTTGCACATTTGAGATGTCCTCTGCCAGGCCTTTGGCCTTTTGTTTTTGGGGTGTATGTAAAATCTAAGTCATCATCGTTAAGGAACTGGACACCTCAGCCTCTCTCTATCTGGTTCTATTGTCAAGAAAGCGGTAGAAAAGGTAAAAACTTAGGGCTTGAGGGGTCTGAGGGTGC------------------------------------------------------------------------------------CATGAGAGAGGTGTGAATGAGCTGGTGTGTACACATATTGCTGGTGGTGAAGCAACAGCAAACAGGTAACTCGGGGGCTGTTCATCCTTCAGCAGTGACACTGTGACCCGTGACCACTGCCC------------AAGAAAAAGCATCCAGGCAAAGGCCCTGGTGAGCCGTCCGATAGTCAATGTGCTCTTGGAGAAGTTTGCTACACTCAGGCCAGACCAAGTGCTAGAAGCAactgcctggctacatttttgttttcatgtttggaAAGACAAAGGTAAAGCCAGGGGGAGTGAGATCGGTCTGGATAAAGCCCAGATCCTGGAGAACAGGCCCCGTGAGGGTCAGTGGAGAAGCACGTGTGAGTTAAGGTCACTGTGATGCAAGCTGCCGTCTCATTCTGCACAAGG-TGAAAAGGGCAGATTGAATCACTGAAGCCACTCAGGAGCCTTTTGtctgggaaaaaacaaaatcGGTCTGTTCAGTAGACCGACACTCGA----TAGTCTAGAGAGAAAATGTGTCTGCAGCTCTGGTATTCTGCCTGAGTTCCTCACACAGGACGTCCCAATTAATGTTGCTGATTGACTGATCAAAAAACCATCTGGCACAGATGCTGATACCGCAGACCCGATGGGTGGCTGCTTCTTCCCCACCCTTCCTCAGCCAAAGGACCTGCACAGAGCTTTCTTCTAGATTTGTTCTTTCGGAAGATGAGAAGCCACCCTATGGAGAGATGCCTATCCAATCATTGCacgttgtattagtccattctcatgctgctataaggatatatctaagactgggtaatttataaatgaaagaggtgtaattgactcacagctcagcagggctggggaagcctcaggaaactt-acaatcgtggcagaaggagaagcaaacacatccttcttcgcatg---gcagcaaggagaaatgTCGAAGCACAGAGCAAAACA-GgggaaaagcctcttataaaaccattggaacttgtgaggactcactcactctcatgagaacagcgtgAGGGTCACCACTCTCGTGATTAAATtac------ccccacctcctccctcc--cgacacacggggattatgggaactacaattcaagatgagatttgggtggggacacggccaaac i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96647780 1390 + 98384682 GGAACTAGAACATTTGAGATGTCCTCTGCCAGGCCTTTGGCCTTTTGTTTTTGGGCTGTATGTAAAATCTAAGTCATCATCGTTAAGGAACTGGACGCCTCAGCCTCTCTCTATCTGGTTCTATTGTCAAGAAAGCCGTGGAAAAGGTAAAAACTTAGGGCTTGAGGGGTCTGAGGGTTCCATGAGAGAGGTGTGAATGAGCTGGTGCCATGAGAGAGGTGTGAATGAGCTGGTGCCATGAGAGAGGTGTGAATGAGCTGGTGCCATGAGAGAGGTGTGAATGAGCTGGTGCATACACACATTGCCGGTGGTGAAGCAACAGCAAACAGGTAACTCGGGTGCTGTTCATCCTTCAGCAGTGACACTGTGACCCCTGACCACTACCCAGGACTCCATGTAAGAAAAAGCATCCAGGCAAAGGCCCTGGTGAGCCGTCCAATAGTCAATGTGCTCTTGGAGAAGTTTACTACACTCAGGCCAGACCAAGTGCTAGAAGCAACTGCCTGGCTACATTTTTGTTTTCATGTTTGGAAAGACAAAGGTAAAGCCAGGGGGAGTGAGATCGGTCTGGATAAAGCCCAGATCCTGGAGAACAGGCCCCGTGAGTGTCAGTGGAGAAGCACGCGTGAGTTAAGGTTGCTGTGATGCAAGCTGCCGTCTCATTCTGCACAAGG-TGAAAAGGGCAGATTGAATCACTGAAGCCACTTAGGAGCCTTTTGTCTGGGAAAAAACAAAATCGGTCTGTTCAGTAGACTGACACTCGA----TAGTCTAGAGAGAAAATGTGTCTGCAGCTGTGGTATTCTGCTTGAGTTCCTCACACAGGATGTCCCAATTAATGTTGCTGATTGACTGATCAAAAAACCATCTGGCATAGATGCTGATACCGCAGACCCAATGGGTGGCTGCTTCTTCCCCACCCTTCCTCAGCCAAAGGACCTGCACAGAGCTTTCTTCTAGATTTGTTCCTTCAGAAGATGAGAAACCACCCTATGGAGAGATGTCTATCCAATCATTGCACATtgtattagtccattctcatgctgctataacgatatatctaagactgggtaatttataaatgaaagaggtgtaattgactcacagctcagcatggctggggaagcctcaggaaactt-acaatcgtggcagaaggagaagcaaacacgtccttcttcacatg---gcagcaaggagaaatgtcgaaacgctgaccaaa--acaggggaaagccccttataaaaccatcggaacttgtgaggactcactcactctcatgagaacagcatgagggtcaccactcccgtgattaaattac------ccccacctcctccctcc--cgacacacggggattatgggaactacaattcaagatgagatttgggtggggacacggccaaac i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169856353 1281 + 171630274 GGAGCTTGCTCATTTGAAACGTCCTCTGCCAGGCCTTT-GCCTTTTGTTTCTGGGGTGTATGTAAGACCTAAGTCCACATCGTTAAGAAACTGGACACCTCAGTGACTCTCAGTCTGGTTCTGTTGTCAGGAAAACCGTGGAAAAGGTAAAA-CCTATGGCTTGAGGGGCCTGAGGGTTT------------------------------------------------------------------------------------GATGAGAAAGGTCCGAATGGGCTGAGGCACACACACACTGCCGGTGGTGAATCAGGGGCAAACAGGCAACGTGGG-GCTGTTCATCCTTCAGCAGCGAAACTGTGATCTGTGACCCCTGTCCAGGGTTCAGTGTGAGAAACA-CACCTGGGCAGAGGTCCTG---AGCCGGTCAACAGTCAGCGTTCTCTCGGAGAAGTCTGCGACCCTCAGGCCAGGGCAAGTGCTGGAAGCAACTGCCTGGCTGTGCTTTTGTTTT-ATGTTCGAGAAGACAAAGGTGAAGCCACTGAGGGTGTCATCGCTCTGGATGAAGCGCAGATCCTGGGGAACAGGCCCGAAGACTGTCCGGGAAGAAGC----GTGAGCTAACCTTGCCATGAAGCAGGCTTCAGTCTCATTCTGCCCGAGA-TGAAAAGGGCAGGTGGAATCACTAGGGCCACTTAGGAGCC-TTTGTCTGGAAAAAAACACAATCAGTCTGTTCAGTAGACTGACACCTGATAGTCCGTCTCGAGAG-AAATGTGTCTGCAGCTGTGGTGTTCTGCTTGAGCTGCTCACACAGGGCTTCCCAATTAATGTTGCTGACTGACTGATCAAAAGACTCTCTGGCACAGATGCTGATACCACAGACCTGCTGAGTGCCTGTTTCTTCCCCGTCCTTCCTCAGCCAAATGACCTGCATGGAGCTTACTTGCAGATTTGTTCTTTGGGAAGGCCAGAAACCACCCGATGGAGA-ATGTCTGTCTCATCACTGCACACGgtatcagtccgttctcatactgctgtaagg----atctgagactgggtgattcataaacggaagaggtgtatttgagtctcaggtcagcagggctggggaagcctcgggaaactt-acagtcacggcagaaggagaagcaaacacgtccttcttcacatg---gcggctgcgagaagtgccaaagtgctgtgcaaa----gcggggaagccccagataaagccgtcaggtctgagaagagctca-tcagtatcatgagcacatcctgagggtcactgcccccatgactcagttac---------------ctcccacccgagacacgtggagatgacgggaactacagttcaagatgagattcgggtggggacacagccaaac i calJac3.chr4 C 0 I 428 e canFam3.chr1 56154202 1010 + 122678785 I a score=23688.000000 s hg38.chr6_KB021644v2_alt 80208 9 + 185823 catatcaCA s panTro4.chr6 170664825 9 + 172623881 catatcaCA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172414132 9 + 174210431 catatcaCA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156281335 9 + 157873769 catatcaCA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168097785 9 + 169853907 catatcaCA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169053474 9 - 170955103 catatcaCA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163871364 9 + 165299245 catatcaca i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96649170 9 + 98384682 catatcaCA i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169857634 428 + 171630274 I e canFam3.chr1 56154202 1010 + 122678785 I a score=11476.000000 s hg38.chr6_KB021644v2_alt 80217 4 + 185823 CATA s panTro4.chr6 170664834 4 + 172623881 CATA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172414141 4 + 174210431 CATA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156281344 4 + 157873769 CATA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168097794 4 + 169853907 CATA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169053483 4 - 170955103 CATA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163871373 4 + 165299245 cata i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96649179 4 + 98384682 CATA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169858062 4 + 171630274 CGTG i calJac3.chr4 I 428 C 0 e canFam3.chr1 56154202 1010 + 122678785 I a score=1946033.000000 s hg38.chr6_KB021644v2_alt 80221 685 + 185823 ATAGAAAATATGTCTTAATTTACACTGGGACGTCTGTAGTGATTAAGTGTAGACACTTAACACTCACATATCACAGCAGCCATG---AAA--TCTCATTGCACTGCACTGGCATTCACGGCGCCCTCATCATG--TGCACATTTACCTAGGAGATGGCATTCACCTAGGAGA-TTAAATTTAGACAATCATGTCCGCAAAGGGAATGCCAATCATTTGGATGTGAGAAGGTGGGTTTTGTGCTGGA-GAT--GTCCCTCC---AGCCTAATTTTTAAAT-ACAATCTGACAGGAAATTCA-ATGTATAAGTCTACGTGTGAAGGTCTGGGGCAGATGAAG-CATACTTTCCTTTTCTTCAGTTCTCTGTAG-----------CTTCTCCTTCAGGCCCTGCTG------GGAGGGTGCAGCAGAGTGAAAACTATTGGTGTCCTGTGAAGAGAGTGGGAAACTTTGTTTCAGGTCC----TTTAAGAAAGCACCAAGGATCCCCAGCTCTAGTTTCCCTCCAACTCTAAAATTCTAAGTACGGACTT-TTTCGGAAGACAAAGACCAGACATTGGAAAACAAAAGACGTT-AGAGATGAGGTGGGTAAAGACGTAATTGTTGT-----TTCTTATAC-TTGTTT--ACTGACAAATACGAAGT-AAACAGTTGGTAAGAGGTGATTTCTCTAGACCTCTGCAAATATGGGATTTCACATTTAACAATCTCCTGC s panTro4.chr6 170664838 685 + 172623881 ATAGAAAATATGTCTTAATTTACACTGGGACGTCTGTAGTGATTAAGTGTAGACACTTAACACTCACACATCATAGCAGCCATG---AGA--TCTCATTGCACTGCACTGGCCTTCACGGCGCCCTCATCATG--TGCACGTTTACCTAGGAGATGGCATTCACCTAGGAGA-TTAAATTTAGACAATCATGTCCGCAAAGGGAATGCCAATCATCTGGATGTGAGAAGGTGGGTTTTGTGATGGA-GAT--GTCCCTCC---AGCCTAATTTTTAAAT-ACAATTTGACAGGAAATTCA-ATGTATAAGTCTATGTGTGAGGGTCTGGGGCAGATGAAG-CATACTTTCTTTTTCTTCAGTTCTCTGTAG-----------CTTCTCCTTCAGGCCCTGCTG------GGAGGGTGCAGCAGAGTGAAAATTATTGGTGTCCTGTGAAGAGAGTGGGAAACTTTGTTTCAGGTCC----TTTAAGAAAGCACCAAGGATCCCCAGCTCTAGTTTCCCTCCAACTCTAAAATTCTAAGTACGGACTT-TTTCAGAAGACAAAGACCAGACATTGGAAAACAAAAGACGAT-AGAGATGAGGTGGGTAAAGACGTAATTGTTGT-----TTCTTATAC-TTGTTT--ACTGACAAATATGAAGT-AAACAGTTGGTAAGAGGTGATTTCTCTAGACCTCTGCAAATATGGGATTTCACATTTAACAATCTCCCGC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172414145 682 + 174210431 ATAGAAAATATGTCTTAATTTACACTGGGATGTCTGTAGTGATTAAGTGTAGACACTTAA----CACACATCACAGCAGCCATG---AAA--TCTCATTGCCCTGCACTGGCATTAACGGAGCCCTCATCATG--TGCACGTTTACCTAGGAGATGGCATTCACCTAGGAGA-TTAAATTTAGACAATCATGTCCGCAAAGGGAATGCCAATCATTTGGATGTAAGAAGGTGGGTTTTGTGATGGA-GAT--GTCCCACC---AGCCTAATTTTTAAAT-ACAATTTGACAGGAAATTCA-GTGTATAAGTCCATGTGTGAGGGTCTGGGGCAGATGAAGCCATACTTTCCTTTTCTTCAGTTCTCTGTAG-----------CTTCTCCTTCAGGCCCTGCTG------GGAGGGTGCAGCAGAGTGAAAACTATTGGTGTCCTGTGAAGAGAGTGGGAAACTTTGTTTCAGGTCC----TTTAAGAAAGCGCCAAGGATCCTCAGCTCTAGTTTCCCTCCAACTCTAAAATTCTAAGTACAGACTT-TTTCAGAAGACAAAGACCAGACATTGGAAAACAAAAGACGTT-AGAAATGAGGTGGATAAAGACGTAATTGTTGT-----TTCTTATAT-TTGTTT--ACTGACAAATACAAAGT-AAACAGTTGGTAAGACGTGATTTCTCTAGAACTCTGCAAATATGGGATTTCACATTTAACAATCTCCCGC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156281348 683 + 157873769 ATAGAAAATACGTCTTAATTTACACTGGGACGTCTGTAGTGATTGAGTGTAGACACTTAACACTCACACATCAT---AGCCATG---AAA--TCTCATCGCACTGCACTGGCATTAACGGAGCCCTCATCATG--TGCACATTTACCTAGGAGATGGCTTTCACCTAGGAGA-TTAAATTTAGACAATCATGTCTGCAAAGGGAATGCCAATCATTTGGATGTGAGAAGGTGGGTTTTGTGATGGA-GAT--GTCCTTCC---AGCCTAATTTTTGAAT-ACAATTTGACAGGAAATTCA-ATGTATAAGTCCATGTGTGAGGGTCTGGGGCAGATGAAGCCACACTTTTCTTTTCTTCAGTTCTCTGTAG-----------CTTCTCCTTCAGGCCCTGCTG------GGAGGGTGCAGCAGAGTGAAAACTATTGGTGTCCTGTGAAGAGAGTGGGAAACTTTGTTTCAGGTCC----TTTAAGAAAGCGCCAAGGATCCTCAGCTCTAGTTTCCCTCCAACTCTAAAATTCTAAGTACAGACTT-TTTCAGAAGACAAAGACCAGGCGTTGGAAAACAAAAGATGTT-AGAGATGAGGTGGGTAAAAAAGTAATTGTTGT-----TTCTTATAC-TTGTTT--ACTGACAAATACGAAGT-AAACAGTTGGTAAGAGGTGATTTCTCTAGACCTCTGCAAATATGGGATTTCACATTTAACAATCTCTCAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168097798 662 + 169853907 ATAAAAAATATGTCTTAATTTACACTGGGGAGTCTGTAGTGATTAAGTGTAGACACTTAACACTCACACATCACAGCAGCCATG---GAA--TCCCACTGCCCTGCATTGGCATTAATGGAGCCCTCATCATG--TGCACGTTTACCTAGGAGATGGCATTCACCTAGGAGA-TTAAA-TTGGACGATCGTGTCCGCAAAGGGAATGCCAATTATTTGGATGTGAGAAGGTAGGTTTTGTGATGGAGGAT--GTCCCTCC---AGCCTAATTTTTAAAT-ACAATTTGAAAGGAAATTCA-ATGTATAAGTCCACGTATGAGGTTCTGGGGCTGATGAAGCCATACATTACACTTCTTCAGTTCTCTGTAG-----------CTTCTCCCTCAGGCCCTGCTG------GGAGGGTGCATCAGAGTGAAAACTATTGGTGTCCTGTGAAGAGAGTTGGAAACTTTGTTTCAGTTCC----TTTAAGAAAGCACCGAGGATCCTCACCTCTAGTTTCCCTCCAACTCTAAAATTCTAAGTACAGACTT-TTTCGGAAGACAAAGACCAGAC-------------------------ATGAGGTGGGTAAAGACGAAATTGTCAT-----TTCTTATAC-TTGTTT--ACTGACAAACACGAAGT-AAATAGTGAGTAAGAGGTGATTTCTCTAGACCTCTGCAAATACGGGATTTCACATTTAACAGTCTCCTGC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169053487 662 - 170955103 ATAAAAAATATGTCTTAATTTACACTGGGGAGTCTGTAGTGATTAAGTGTAGACACTTAACACTCACACATCACAGCAGCCATG---GAA--TCCCACTGCCCTGCATTGGCATTAACGGAGCCCTCATCATG--TGCACGTTTACCTAGGAGATGGCATTCACCTAGGAGA-TTAAA-TTGGACGATCGTGTCCGCAAAGGGAATGCCAATTATTTGGATGTGAGAAGGTAGGTTTTGTGATGGAGGAT--GTCCCTCC---AGCCTAATTTTTAAAT-ACAATTTGAAAGGAAATTCA-ATGTATAAGTCCACGTATGAGGTTCTGGGGCTGATGAAGCCATACATTACACTTCTTCAGTTCTCTGTAG-----------CTTCTCCCTCAGGCCCTGCTG------GGAGGGTGCATCAGAGTGAAAACTATTGGTGTCCTGTGAAGAGAGTTGGAAACTTTGTTTCAGTTCC----TTTAAGAAAGCACCGAGGATCCTCACCTCTAGTTTCCCTCCAACTCTAAAATTCTAAGTACAGACTT-TTTCGGAAGACAAAGACCAGAC-------------------------ATGAGGTGGGTAAAGACGCAATTGTCAT-----TTCTTATAC-TTGTTT--ACTGACAAACACGAAGT-AAATAGTGAGTAAGAGGTGATTTCTCTAGACCTCTGCAAATACGGGATTTCACATTTAACAGTCTCCTGC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163871377 663 + 165299245 ataaaaaatatgtctTAATTTACACTGGGGAGTCTGTAGTGATTAAGTGTAGACACTTAACACTCACACATCGCAGCAGCCATG---GAA--TCCCACTGCCCTGCACTGGCATTAACGGAGCCCTCATCATG--TGCACGTTTACCTAGGAGACGGCATTCACCTAGGAGA-TTAAATTTGGACAATCGTGTCCGCAAAGGGAATGCCAATTATTTGGATGTGAGAAGGTAGGTTTTGTGATGGAGGAT--GTCCctcc---agcctaatttttaaat-acaatttgaaaGGAAATTCA-ATGTATAAGTCCACGTATGAGGTTCTGGGGCCGATGAAGCCATACATTCCACTTCTTCAGTTCTCTGTAG-----------CTTCTCCCTCAGGCCCTGCTG------GGAGGGTGCATCAGAGTGAAAACTATTGGTGTCCTGTGAAGAGAGTTGGAAACTTTGTTTCAGTTCC----TTTAAGAAAGCCCCGAGGATCCTCACCTCTAGTTTCCCTCCAACTCTAAAATTCTAAGTACAGACTT-TTTTGGAAGACAAAGACCAGAC-------------------------ATGAGGTGGGTAAAGACGCAATTGTCAT-----TTCTTATGC-TTGTTT--ACTGACAAACACAAAGT-AAATAGTGAGTAAGAGGTGATTTCTCTAGACCTCTGCAAATACGAGATTTCACATTTAACAGTCTCCTGT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96649183 659 + 98384682 ATAGAAAACATGTCTTAATTTACACTGGGGAGTCTGCAGTGATTAAGTGTAGACACTTAACACTCACACATCACAGCAGCCATG---GAA--TCCCATTGCCCTGCACTGGCATTAACGGAGCCCTCATCATG--TGCACGTTTACCTAGGAGACGGCATTCACCGAGGAGA-TTAAATTTGGACAATCGTGTCAGCAAAGGGAATGCCAATTATTTGGATATGAGAAGGTAGGTTTTGTGATGGAGGAT--GTCCCTCC---AGCCTAATTTTTAAAT-ACAATTTGAAAGGAAATTCG-ATGTATAAGTCCATGTGTGAGGTTCTGGGGCCGATGAAGCCATACATTCCCTTTCTTCAGTTCTCCGTAG-----------CTTCTCCCTCAGGCCCTGCTG------GGAGGGTGCAGCAGAGTGAAAACTATTGGTGTCCTGTGAAGAGAGCAGGAAATTTTGCTTCAGTTCC----TTTAAGAAAGCCCCGAGGATCCTCACCTCTAGTTTCCTTTCAACTCTAAAATTCTAAGTACAGACTT-TTTCAGAAGACAAAGACCAGAC-------------------------ATGAGGTGGGTAAAGATGCAATTGTCAT-----TTCTTATAC-TTGTTT--ACTGACAAACACGAAGT-AAAC----AGTAAGAGGTGATTTCTCTAGACCTCTGCAAATACGCGATTTCACATTTAACAGTCTCCTGC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169858066 669 + 171630274 GTAGGAAGTATGTCTCAATTTACACTGGGAAGTCTGTAGTGACTAA-TGCAGACACTTAACACTCCCACGTCACAGCAGCCATG---AGAACTCTCATTGCCC-ACACTGGCACT---GGGGCCCTCACCAAG--TGCACGTTTACATAGG-GGCGGCATTCCCCTAAGAG---TACATTTAGACAGTTGTGTCAGGAAAGGGAACACCGGTCATTTGGATGTGAGGA-GTGGGTTATGTGATGGAGGAT--GTCCCCCC---AACCTAATTTTTTAAT-GCAATTTGACAGGAAATTCA-ATGTGTAAGTCCACGTGTGAGGGTCTGGGGCAGACGAAGCCATGTTTTCAGTTTCCTCCGTTCTCTGTAG--------------CTCCCCCAGGCCCTGCTG------GGA-GGTG-AGCAGAGGGAAAACGATCAGTGTCTTGGCAAGGGAGGGGGAAACTTTGTTTCGAGTCC----TTTAAGAAAGCGTGGATGGT-CTCACCTCGAGTTTCCCTCCAACTCTAAAATTCTAAGTACAGACTTGCTTCAGAAGACAAAGGCC-----TTGGAAAACAAAAGAC-TT-AGAGATGAGGTGGGAGAAGGCGTCATTGTTAT-----TTATGATTC-TTGTTT--ACGGGCAAACACGAAAT-AAACCATTGGTGAGAGGTGGTTTCTCCACACCTCTGAAGACAGGGGATTTCACATTTAACAACCGCCCGT i calJac3.chr4 C 0 C 0 s canFam3.chr1 56155212 702 + 122678785 ACGGGAAgtctgtctc-cttcacactg---agtccatggtggttcagcacagacacggg-----caattatagtaggagctctggtaaGA--TCCCATCGC-CTGCACTGGGACC-ACGGGGTCCCCATCATGCATGTAGATGCAC-----ACATAGCATCTACCCGGGGCACTCAAAGTTAGGATGTCCTGTCCAGAAAAGGAATGTCCTCCATTTGGATTTGGGAAGTTG---TTAGTGCGGGGTGCTGGGTTCCTCTGTGGGACTCATTTTTGAATGGGGATTTTACAGAAAATTTATGCATATATATGGGCTTGGGGGGGTGTGTGGCCCATGAACCCACACTTCTGGCTTCCTCTCCTCTCAGTGGAGGGCCCTGGCCTCCTTCCTGGAAGCTTGTGGTACAGTGAAGATCGTGGTACAGGGAAAACCAGAGAAACCCTTTAAAGTGTGATGGACACTCAGTTTCCGGTCCCGTATTTAGGAAGAGTTCAATGGTCACTGCCTCTACTTCCCCTCCAGCTCC-AAATCCTATGTCCAAACCT--TTCAGAAGACAAAGACCAGAA--------ACCAAAGACCCTGAGAGGTGGTGGGGATGGCGGTGTGGTGGTGGTTGCGGTCCCTAGACTTTGTTTAAATGGACAGATATGGAGTGAAACGCTGAGTAAGACATGGTCTCCCTGGGCCTCTGCACAGGCAGGATTTCACATTTAACCAGTCCCTGC i canFam3.chr1 I 1010 I 445 a score=167005.000000 s hg38.chr6_KB021644v2_alt 80906 67 + 185823 GCTCTTCGTATTCATGCAGTCACCCGTC--AGCACATCTGCGCTGCTGGAAGAGCCAAAGCT----GAAACGC s panTro4.chr6 170665523 67 + 172623881 ACTCTTCGTATTCATGCAGTCACCCCTC--AGCACATCTGCGCGGCTGGAAGAGCCAAAGCG----GAAACGC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172414827 69 + 174210431 ACTGTTCTTACTCATGCAGTCAACCCTCTTAGCACATCTGTGCTGCCGGAAGAGCCAAAGCT----AAAACAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156282031 69 + 157873769 GCTGTTCGTATTCATGCAGTCAACCCTCTTAGCATATCTGCGCTGCTGGAAGAGCCAAAGCT----AAAACGC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168098460 69 + 169853907 GCTCTTCATGTCCATGCAGTCAACCCCTTGAGCACATCTGCGCTGCTGGAAGAACCGAAGAT----AAAACAC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169054149 69 - 170955103 GCTCTTCATGTCCATGCAGTCAACCCCTTGAGCACATCTGCGCTGCTGGAAGAACCGAAGAT----AAAACAC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163872040 73 + 165299245 GCTCTTCATGTCCATGCAGTCAACCCCATGAGCACATCTGCGCTGCTGGAAGAACCGAAGATaaaaaaaaCAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96649842 69 + 98384682 GCTCTTCATGTCCATGCAGTCAACCCCGTGAGCACATCTGCGCTGCTGGAAGAACCGAAGAT----AAAACAC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169858735 70 + 171630274 GCTCTTCATATTCATGCAGTTGACCCTGTTAGCACATCTGCGCTGCTGGAAGAGCCGAGGGT---TAGAACGC i calJac3.chr4 C 0 I 1 e canFam3.chr1 56155914 445 + 122678785 I a score=6345.000000 s hg38.chr6_KB021644v2_alt 80973 3 + 185823 CGG s panTro4.chr6 170665590 3 + 172623881 CGG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172414896 3 + 174210431 CAG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156282100 3 + 157873769 CGG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168098529 3 + 169853907 CAG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169054218 3 - 170955103 CAG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163872113 3 + 165299245 CAG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96649911 3 + 98384682 CAG i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169858805 1 + 171630274 I e canFam3.chr1 56155914 445 + 122678785 I a score=15647.000000 s hg38.chr6_KB021644v2_alt 80976 17 + 185823 GTCTGCTGATGGTGCCG s panTro4.chr6 170665593 17 + 172623881 GTCTGCTGATGGTGCCG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172414899 17 + 174210431 GTCTACTGATGGTGCCG i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168098532 17 + 169853907 GTCTACTGATGGTGCCG i rheMac3.chr4 C 0 C 0 s chlSab2.chr13 96649914 17 + 98384682 GTCTACTGATGGTGCCG i chlSab2.chr13 C 0 I 1 e calJac3.chr4 169858805 1 + 171630274 I e canFam3.chr1 56155914 445 + 122678785 I e papAnu2.chr4 163872116 0 + 165299245 C e nomLeu3.chr3 156282103 0 + 157873769 C e macFas5.chr4 169054221 0 - 170955103 C a score=1200.000000 s hg38.chr6_KB021644v2_alt 80993 2 + 185823 GG s panTro4.chr6 170665610 2 + 172623881 GG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172414916 2 + 174210431 GG i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168098549 2 + 169853907 GG i rheMac3.chr4 C 0 C 0 e calJac3.chr4 169858805 1 + 171630274 I e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e papAnu2.chr4 163872116 0 + 165299245 C e nomLeu3.chr3 156282103 0 + 157873769 C e macFas5.chr4 169054221 0 - 170955103 C a score=3753.000000 s hg38.chr6_KB021644v2_alt 80995 17 + 185823 GTCCGGCTGTTTCTCTT s panTro4.chr6 170665612 17 + 172623881 GTCCAGCTGTTTCTGTT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172414918 17 + 174210431 GGCCAGCTGTTTCTGTT i ponAbe2.chr6 C 0 C 0 e calJac3.chr4 169858805 1 + 171630274 I e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e papAnu2.chr4 163872116 0 + 165299245 C e nomLeu3.chr3 156282103 0 + 157873769 C e rheMac3.chr4 168098551 0 + 169853907 C e macFas5.chr4 169054221 0 - 170955103 C a score=9523.000000 s hg38.chr6_KB021644v2_alt 81012 24 + 185823 GTCTACTGATGGTGCCGGGGGTCC- s panTro4.chr6 170665629 23 + 172623881 GTCTACTGATGGTGCTGGGGG-CC- i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172414935 23 + 174210431 GTCTACTGATGGTGCTGGGGG-CC- i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156282103 24 + 157873769 GTCTACTGATGGTGCCAGGGG-TCT i nomLeu3.chr3 C 0 C 0 e calJac3.chr4 169858805 1 + 171630274 I e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e papAnu2.chr4 163872116 0 + 165299245 C e rheMac3.chr4 168098551 0 + 169853907 C e macFas5.chr4 169054221 0 - 170955103 C a score=3261.000000 s hg38.chr6_KB021644v2_alt 81036 13 + 185823 GGCTGTTTCTCTT s panTro4.chr6 170665652 13 + 172623881 GGCTGTTTCTGTT i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156282127 13 + 157873769 GGCTGTTTCTGTT i nomLeu3.chr3 C 0 T 37 e calJac3.chr4 169858805 1 + 171630274 I e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e papAnu2.chr4 163872116 0 + 165299245 C e rheMac3.chr4 168098551 0 + 169853907 C e ponAbe2.chr6 172414958 0 + 174210431 C e macFas5.chr4 169054221 0 - 170955103 C a score=59023.000000 s hg38.chr6_KB021644v2_alt 81049 243 + 185823 GTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGT-GCCGGGGGTCCGGCTGTTTCTGTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTGTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTGTTGTCTACTGATGGTGCCGGGGG s panTro4.chr6 170665665 241 + 172623881 GTCTACTGATGGTGCTGGGGG-CCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTT--TCTTGTCTACTGATGTTGGGGGGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTCTTGTGTACTGATGGTGCTGGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGATCCGGCTGTTTCTGTTGCGTACTGATGGTGCTGGGGG i panTro4.chr6 C 0 T 4145 s nomLeu3.chr3 156282103 243 + 157873769 GTCTACTGATGGTGCCAGGGGTCTGGCTGTTTCTGTTGTCTACTGATGGTGCCAGGGGTCCGGCTGTTTCTGTTGTCTACTGATGGT-GCCAGGGGTCCGGCTGTTTCTGTTGTCTACTGATGGTGCCAGGGGTCCGGCTGTTTCTGTTGTGTACTGATGGTGCCAGGGGTCCGGCTGTTTCTGTTGTGTACTGATGGTGCCGGGGGTCCGGCTGTTTCTGTTGTGTACTGATGGTGCCAGGGG i nomLeu3.chr3 T 37 C 0 e calJac3.chr4 169858805 1 + 171630274 I e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e papAnu2.chr4 163872116 0 + 165299245 C e rheMac3.chr4 168098551 0 + 169853907 C e ponAbe2.chr6 172414958 0 + 174210431 C e macFas5.chr4 169054221 0 - 170955103 C a score=91.000000 s hg38.chr6_KB021644v2_alt 81292 1 + 185823 T s nomLeu3.chr3 156282346 1 + 157873769 T i nomLeu3.chr3 C 0 C 0 e calJac3.chr4 169858805 1 + 171630274 I e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e papAnu2.chr4 163872116 0 + 165299245 C e rheMac3.chr4 168098551 0 + 169853907 C e ponAbe2.chr6 172414958 0 + 174210431 C e macFas5.chr4 169054221 0 - 170955103 C e panTro4.chr6 170665906 4145 + 172623881 T a score=2073.000000 s hg38.chr6_KB021644v2_alt 81293 7 + 185823 CCGGCTG s panTro4.chr6 170661761 7 + 172623881 CCGGCTG i panTro4.chr6 T 4145 C 0 s nomLeu3.chr3 156282347 7 + 157873769 CCGGCTG i nomLeu3.chr3 C 0 I 74 e calJac3.chr4 169858805 1 + 171630274 I e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e papAnu2.chr4 163872116 0 + 165299245 C e rheMac3.chr4 168098551 0 + 169853907 C e ponAbe2.chr6 172414958 0 + 174210431 C e macFas5.chr4 169054221 0 - 170955103 C a score=19006.000000 s hg38.chr6_KB021644v2_alt 81300 85 + 185823 TTTCTCTTGTCTACTGATGGTGCC-GGGGTCCGGCTGTTTCTGTTGTCTATTGATGGTGCCGGGGGTCCGGCTGTTTCTGTTGTCT s panTro4.chr6 170661768 86 + 172623881 TTTCTCTTGTCTACTGATGGTGCTGGGGGTCCGGCTGTTTCTGTTGTGTACTGATGGTGCCGGGGATCCGGCTGTTTCTGTTGCGT i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156282428 86 + 157873769 TTTCTGTTGTGTACTGATGGTGCTGGGGGTCCGGCTGTTTCTGTCGTGTACTCATGGTGACGGGGGTGCGGCTGTTTCTGTTGACT i nomLeu3.chr3 I 74 T 167 e calJac3.chr4 169858805 1 + 171630274 I e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e papAnu2.chr4 163872116 0 + 165299245 C e rheMac3.chr4 168098551 0 + 169853907 C e ponAbe2.chr6 172414958 0 + 174210431 C e macFas5.chr4 169054221 0 - 170955103 C a score=1393.000000 s hg38.chr6_KB021644v2_alt 81385 17 + 185823 ACTGATGGTGCCGGGGG s panTro4.chr6 170661854 17 + 172623881 ACTGATGGTGCTGGGGA i panTro4.chr6 C 0 C 0 e calJac3.chr4 169858805 1 + 171630274 I e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e papAnu2.chr4 163872116 0 + 165299245 C e nomLeu3.chr3 156282514 167 + 157873769 T e rheMac3.chr4 168098551 0 + 169853907 C e ponAbe2.chr6 172414958 0 + 174210431 C e macFas5.chr4 169054221 0 - 170955103 C a score=8754.000000 s hg38.chr6_KB021644v2_alt 81402 36 + 185823 CCAGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGG s panTro4.chr6 170661871 36 + 172623881 CCGGCTGTTTCTGTTGCGTACTGATGGTGCTGGGGG i panTro4.chr6 C 0 I 3999 s nomLeu3.chr3 156282347 36 + 157873769 CCGGCTGTTTCTGTTGTGTACTGATGGTGCCGGGGG i nomLeu3.chr3 T 167 C 0 e calJac3.chr4 169858805 1 + 171630274 I e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e papAnu2.chr4 163872116 0 + 165299245 C e rheMac3.chr4 168098551 0 + 169853907 C e ponAbe2.chr6 172414958 0 + 174210431 C e macFas5.chr4 169054221 0 - 170955103 C a score=91.000000 s hg38.chr6_KB021644v2_alt 81438 1 + 185823 T s nomLeu3.chr3 156282383 1 + 157873769 T i nomLeu3.chr3 C 0 C 0 e calJac3.chr4 169858805 1 + 171630274 I e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e papAnu2.chr4 163872116 0 + 165299245 C e rheMac3.chr4 168098551 0 + 169853907 C e ponAbe2.chr6 172414958 0 + 174210431 C e macFas5.chr4 169054221 0 - 170955103 C e panTro4.chr6 170661907 3999 + 172623881 I a score=3861.000000 s hg38.chr6_KB021644v2_alt 81439 15 + 185823 CCGGCTGTTTCTCTT s panTro4.chr6 170665906 15 + 172623881 CCGGCTGTTTCTCTT i panTro4.chr6 I 3999 C 0 s nomLeu3.chr3 156282384 15 + 157873769 CCGGCTGTTTCTGTT i nomLeu3.chr3 C 0 T 296 e calJac3.chr4 169858805 1 + 171630274 I e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e papAnu2.chr4 163872116 0 + 165299245 C e rheMac3.chr4 168098551 0 + 169853907 C e ponAbe2.chr6 172414958 0 + 174210431 C e macFas5.chr4 169054221 0 - 170955103 C a score=46679.000000 s hg38.chr6_KB021644v2_alt 81454 186 + 185823 GTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGGTCTGGCTGTTTCTGTTGTACTACTGATGGTGCCGGGGGTCCGGCTGTTTCTGTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTCTT s panTro4.chr6 170665921 185 + 172623881 GTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGATCCGGCTGTTTCTGTTGT-CTACTGATGTTGGGGGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGATCCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTCTT i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156282103 185 + 157873769 GTCTACTGATGGTGCCAGGGGTCTGGCTGTTTCTGTTGTCTACTGATGGTGCCAGGGGTCCGGCTGTTTCTGTTGT-CTACTGATGGTGCCAGGGGTCCGGCTGTTTCTGTTGTCTACTGATGGTGCCAGGGGTCCGGCTGTTTCTGTTGTGTACTGATGGTGCCAGGGGTCCGGCTGTTTCTGTT i nomLeu3.chr3 T 296 T 185 e calJac3.chr4 169858805 1 + 171630274 I e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e papAnu2.chr4 163872116 0 + 165299245 C e rheMac3.chr4 168098551 0 + 169853907 C e ponAbe2.chr6 172414958 0 + 174210431 C e macFas5.chr4 169054221 0 - 170955103 C a score=17056.000000 s hg38.chr6_KB021644v2_alt 81640 66 + 185823 GTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTGTTGTCTACTGATGGTGCCGGGGGTCCGGCTG s panTro4.chr6 170666106 66 + 172623881 GTGTACTGATGGTGCCGGGGGTCCGGCTGTTTCTGTTGTGTCCTGATGGTGCCGGGGGTCCGGCTG i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156282103 66 + 157873769 GTCTACTGATGGTGCCAGGGGTCTGGCTGTTTCTGTTGTCTACTGATGGTGCCAGGGGTCCGGCTG i nomLeu3.chr3 T 185 I 185 e calJac3.chr4 169858805 1 + 171630274 I e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e papAnu2.chr4 163872116 0 + 165299245 C e rheMac3.chr4 168098551 0 + 169853907 C e ponAbe2.chr6 172414958 0 + 174210431 C e macFas5.chr4 169054221 0 - 170955103 C a score=1392.000000 s hg38.chr6_KB021644v2_alt 81706 5 + 185823 TTTCT s panTro4.chr6 170666172 5 + 172623881 TTTCT i panTro4.chr6 C 0 T 4001 s nomLeu3.chr3 156282354 5 + 157873769 TTTCT i nomLeu3.chr3 I 185 C 0 e calJac3.chr4 169858805 1 + 171630274 I e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e papAnu2.chr4 163872116 0 + 165299245 C e rheMac3.chr4 168098551 0 + 169853907 C e ponAbe2.chr6 172414958 0 + 174210431 C e macFas5.chr4 169054221 0 - 170955103 C a score=5983.000000 s hg38.chr6_KB021644v2_alt 81711 24 + 185823 GTTGTCTATTGATGGTGCCGGGGG s panTro4.chr6 170662176 24 + 172623881 GTTGTGTACTGATGGTGCTGGGGG i panTro4.chr6 T 4001 C 0 s nomLeu3.chr3 156282359 24 + 157873769 GTTGTGTACTGATGGTGCCGGGGG i nomLeu3.chr3 C 0 T 280 e calJac3.chr4 169858805 1 + 171630274 I e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e papAnu2.chr4 163872116 0 + 165299245 C e rheMac3.chr4 168098551 0 + 169853907 C e ponAbe2.chr6 172414958 0 + 174210431 C e macFas5.chr4 169054221 0 - 170955103 C a score=950.000000 s hg38.chr6_KB021644v2_alt 81735 15 + 185823 CCAGCTGTTTCTCTT s panTro4.chr6 170662200 15 + 172623881 CTGGCTGTTTCTGTT i panTro4.chr6 C 0 C 0 e calJac3.chr4 169858805 1 + 171630274 I e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e papAnu2.chr4 163872116 0 + 165299245 C e nomLeu3.chr3 156282383 280 + 157873769 T e rheMac3.chr4 168098551 0 + 169853907 C e ponAbe2.chr6 172414958 0 + 174210431 C e macFas5.chr4 169054221 0 - 170955103 C a score=5476.000000 s hg38.chr6_KB021644v2_alt 81750 29 + 185823 GTCTACTGATGGTGCCGGGGGTCTGGCTC s panTro4.chr6 170662215 28 + 172623881 GTGTACTGATGGCGCTGGGGG-CCGGCTG i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156282103 29 + 157873769 GTCTACTGATGGTGCCAGGGGTCTGGCTG i nomLeu3.chr3 T 280 I 37 e calJac3.chr4 169858805 1 + 171630274 I e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e papAnu2.chr4 163872116 0 + 165299245 C e rheMac3.chr4 168098551 0 + 169853907 C e ponAbe2.chr6 172414958 0 + 174210431 C e macFas5.chr4 169054221 0 - 170955103 C a score=1515.000000 s hg38.chr6_KB021644v2_alt 81779 7 + 185823 TTTCTGT s panTro4.chr6 170662243 7 + 172623881 TTTCTCT i panTro4.chr6 C 0 I 3927 s nomLeu3.chr3 156282169 7 + 157873769 TTTCTGT i nomLeu3.chr3 I 37 C 0 e calJac3.chr4 169858805 1 + 171630274 I e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e papAnu2.chr4 163872116 0 + 165299245 C e rheMac3.chr4 168098551 0 + 169853907 C e ponAbe2.chr6 172414958 0 + 174210431 C e macFas5.chr4 169054221 0 - 170955103 C a score=72825.000000 s hg38.chr6_KB021644v2_alt 81786 296 + 185823 TGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTGTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTGTTGTCTACTGATGGTGCTGGGGGTCCGGCTGTTTCTGTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTGTTGTCTACTGATGGTGCCGGGG-TCCGGCTGTTTCTGTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTGTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTGTT s panTro4.chr6 170666177 297 + 172623881 TGTCTACTGATGTTGGGGGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTGTTGTGTACTGATGGTGCCGGGGATCCGGCTGTTTCTCTTGTCTACTGATGGTGCTGGGGGTCCGGCTGTTTCTCTTGCCTACTGATGGTGCCGGGGGTCTGGCTGTGTCTCTTGTCTACTGATGGTGCCAGGGGTCTGGCTGTTTCTATTGTCTACTGATGGTGCTGGGGGTCCGGCTGTTTCTCTTGCCTACTGATGGTGCCGGGGGTCTGGCTGTGTCTCTT i panTro4.chr6 I 3927 C 0 s nomLeu3.chr3 156282176 297 + 157873769 TGTCTACTGATGGTGCCAGGGGTCCGGCTGTTTCTGTTGTCTACTGATGGTGCCAGGGGTCCGGCTGTTTCTGTTGTGTACTGATGGTGCCAGGGGTCCGGCTGTTTCTGTTGTGTACTGATGGTGCCGGGGGTCCGGCTGTTTCTGTTGTGTACTGATGGTGCCAGGGGTCCGGCTGTTTCTGTTGTGTACTGATGGTGCCGGGGGTCCGGCTGTTTCTGTTGTGTACTGATGGTGCCGGGGGTCCGGCTGTTTCTGTTGTGTACTGATGGTGCTGGGGGTCCGGCTGTTTCTGTC i nomLeu3.chr3 C 0 C 0 e calJac3.chr4 169858805 1 + 171630274 I e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e papAnu2.chr4 163872116 0 + 165299245 C e rheMac3.chr4 168098551 0 + 169853907 C e ponAbe2.chr6 172414958 0 + 174210431 C e macFas5.chr4 169054221 0 - 170955103 C a score=12740.000000 s hg38.chr6_KB021644v2_alt 82082 17 + 185823 GTCTACTGATGGTGCCA s panTro4.chr6 170666474 17 + 172623881 GTGTACTGATGGTGCCG i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156282473 17 + 157873769 GTGTACTCATGGTGACG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169054221 17 - 170955103 GTCTACTGATGGTGCCG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163872116 17 + 165299245 GTCTACTGATGGTGCCG i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169858805 1 + 171630274 I e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e rheMac3.chr4 168098551 0 + 169853907 C e ponAbe2.chr6 172414958 0 + 174210431 C a score=-2465.000000 s hg38.chr6_KB021644v2_alt 82099 2 + 185823 GA- s panTro4.chr6 170666491 2 + 172623881 GG- i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156282490 2 + 157873769 GG- i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169054238 2 - 170955103 -GG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163872133 2 + 165299245 -GG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96649932 1 + 98384682 -G- i chlSab2.chr13 I 1 C 0 e calJac3.chr4 169858805 1 + 171630274 I e canFam3.chr1 56155914 445 + 122678785 I e rheMac3.chr4 168098551 0 + 169853907 C e ponAbe2.chr6 172414958 0 + 174210431 C a score=3428.000000 s hg38.chr6_KB021644v2_alt 82101 5 + 185823 GGTCT s panTro4.chr6 170666493 5 + 172623881 GGTCT i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156282492 5 + 157873769 GGTGC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168098551 5 + 169853907 GGACA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169054240 5 - 170955103 GGACA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163872135 5 + 165299245 GGACA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96649933 5 + 98384682 GGACA i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169858805 1 + 171630274 I e canFam3.chr1 56155914 445 + 122678785 I e ponAbe2.chr6 172414958 0 + 174210431 C a score=1883.000000 s hg38.chr6_KB021644v2_alt 82106 1 + 185823 G s panTro4.chr6 170666498 1 + 172623881 G i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172414958 1 + 174210431 A i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156282497 1 + 157873769 G i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168098556 1 + 169853907 G i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169054245 1 - 170955103 G i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163872140 1 + 165299245 G i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96649938 1 + 98384682 G i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169858805 1 + 171630274 I e canFam3.chr1 56155914 445 + 122678785 I a score=344847.000000 s hg38.chr6_KB021644v2_alt 82107 120 + 185823 GCTGTTTCTGTTGACTTCCTGTTTCTTCCCTTTGCAGCTCACCGATTTTCCAAAGTACGGACACCTGGTGTAGTTGCCCTCAGCTGTATTCAGACCTATTCAGAAACAGCTGCCTCTGAC s panTro4.chr6 170666499 120 + 172623881 GCTGTTTCTGTTGACTTCCAGTTTCTTCCCTTTGCAGCTCACTGATTTTCCAAAGTATGGACACCTGGTGTAGTTGCCCTCAGCTGTATTCAGACCTATTCAGAAACAGCTGCCTCTGAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172414959 120 + 174210431 GCTGTTTCTGTTGACTTCCTGTTTCTTCCCTTTGCAGCTCACCAATTTTCCAAAGTACGGACACCTGGTGCGTTTACCCTCAGCTGTATTCAGACCTGTTCAGAAACAGCTGCCTCTGAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156282498 120 + 157873769 GCTGTTTCTGTTGACTTCCTGTTTCTTCCCTTTGCAGCTCACCGATTTTCCAAAGTATGGACACCTGGCACAGTTGCCCTCAGCTGTATTCAGACCTATTCAGAAACAGCTGCCTCTGAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168098557 120 + 169853907 GCTGTTTCTGTTGACTTTCTGTTTTTTCCCTTTGCAGCTCACCAATTTTCCAAAGTATGGACACTTGGCGCAGTTGCCCTCGGCTGTATTCAGACCTATTCAGAAACAGCTGCCTCTGAC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169054246 120 - 170955103 GCTGTTTCTGTTGACTTTCTGTTTTTTCCCTTTGCAGCTCACCAATTTTCCAAAGTACGGACACTTGGCGCAGTTGCCCTCGGCTGTATTCAGACCTATTCAGAAACAGCTGCCTCTGAC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163872141 120 + 165299245 GCTGTTTCTGTTGACTTCCTGTTTCTTCCCGTTGCAGCTCACCAATTTTCCAAAGTACGGACACTTGGCGCAGTTGCCTTCGGCTGTATTCAGACCTATTCAGAAACAGCTGCCTCTGAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96649939 120 + 98384682 GCTGTTTCTGTTGACTTCCTGTTTCTTCCCTTTGCAGCTCACCAATTTTCCAAAGTACGGACACTTGGCGCAGTTGCCCTCAGCTGTATTCAGACCTATTCAGAAACAGCTGCCTCTGAC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169858806 107 + 171630274 GCCGCTTCTGTTGGCCTCCTCTTCCTTCCCTTCG-AGCTCACCGATCTTCCAAGGTACGTTCATCTGGCACAGGTGCCCTCGG------------CTCTCCAGAAACAGCTGCCTCTGAC i calJac3.chr4 I 1 C 0 e canFam3.chr1 56155914 445 + 122678785 I a score=114146.000000 s hg38.chr6_KB021644v2_alt 82227 36 + 185823 ATGCTGAAATTTACCTTTTTATCCTAACATTTCAAC s panTro4.chr6 170666619 36 + 172623881 ATCCTGAAATTTACCTTTTTATCCTAACATTTCAAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172415079 36 + 174210431 ATCCTGAAATTTACCTTTTTATTCTAACATTTCAAC i ponAbe2.chr6 C 0 I 8 s nomLeu3.chr3 156282618 36 + 157873769 ATCCTGAAATTTATCTTTTTATTCTAACATTTCAAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168098677 36 + 169853907 ATCATGAAATTTACCTTTTTATTCTAACTTTTCAAC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169054366 36 - 170955103 ATCATGAAATTTACCTTTTTATTCTAACTTTTCAAC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163872261 36 + 165299245 ATCAtgaaatttacctttttattctAACTTTTCAAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96650059 36 + 98384682 ATCATGAAATTTACCTTTTTATTCTAACTTTTCAAC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169858913 36 + 171630274 ATCATGAAATTTTCCTTTTTATTCTAACTTCTCAAC i calJac3.chr4 C 0 C 0 s canFam3.chr1 56156359 36 + 122678785 ATGACGAGACTTACCTCTCCGCTTGAATGTCTTAGC i canFam3.chr1 I 445 C 0 a score=8764.000000 s hg38.chr6_KB021644v2_alt 82263 3 + 185823 TGC s panTro4.chr6 170666655 3 + 172623881 TGC i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156282654 3 + 157873769 TGC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168098713 3 + 169853907 TGC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169054402 3 - 170955103 TGC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163872297 3 + 165299245 TGC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96650095 3 + 98384682 TGC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169858949 3 + 171630274 TGC i calJac3.chr4 C 0 C 0 s canFam3.chr1 56156395 3 + 122678785 AGC i canFam3.chr1 C 0 C 0 e ponAbe2.chr6 172415115 8 + 174210431 I a score=2162198.000000 s hg38.chr6_KB021644v2_alt 82266 717 + 185823 -CGTTTTTAATTTTCAAAATAAA---CTGTGAGGTTTGATATTGTTCAGAG---TTCACACAACAAGT---CTTTCATCCTCAT-TAGAAATATCTCTT----------CAAGGCCAGAGCCTCTGTGGTTTCTCCTCCCTAACACAGACACTGAATGCCATAACTGTGTGTTTGGGAAAGCATCCTTTATAAGGGTTCCCTGTCTGTCAATTAAGAAAGTGGTTCCATGAAAA----CACATCCTTTGTTTTATGAGCAGAATCAGAGATT-CCGGGGAGAAACAGGACCCAGGGAGATGAGAGCTTTCAGAGATACCGGAGAGCTTGGCTGGTCTGGG------TGTGAGGCCAGAGGAGGGGCCTCCCC--TTCGGCATCTCAGTAGGACCACGCCAGTCCGGCCCGACCA-CAGTGACCTTCAGGGGACTGACcttggacgggtgttaaacctccctattccacagccctcccagaggctctgacttagtatttagcaaggggctgagggattcttcattcatagc-aatgctcccaggt----aatAGTCGGACAGTTTCTGGAAGCACTAAATTA----------------------TTGAATTGTAAGCACTCATTTGCATCAGATGCTGTATAGGCTGCCACCTCAAAGTGTATAGAATGGGA-TAAAAACTAAATGAAAGTGG---ATTAAAACACTCTAAAAAA--GTGTTGAGTTTGGGGTTGAGGCCTCAAATCAGTGATTATAAGAACAAAATTTCACTAGGATCTTAGAAT s panTro4.chr6 170666658 719 + 172623881 -CGTTTTTAAATTTCAAAATAAA---CTGTGAGGCTTGATATTGTTCAGGG---TTCACACAAGAAGT---CTTTCATCCTCATCTAGAAATATCTTTT----------CAAGGCCAGAGCCTCTGTGGTTTCTCCTGCTTATCACAGACAGTGAATGCCATAACTGTGTGTTTGGGAAAGCATCCTTTATAAGGGTTCCCTGTCTGTCAATTAAGAAAGTGGTTCCATGAAAA----CACGTCCTTTGTTTTATGAGCAGAATCAGAGATT-CCGGGGAGAAACAGGACCCAGGGAGATGAGAGCTTTCAGAGATACCGGAGAGCTTGGCTGGTCTGGG------TGTGAGGCCAGAGGAGGGGCCTCCCC--CTCGGCATCTCAGTAGGACCACGCCAGTCCGGCCCGACCA-CAGTGACCTTCAGGGGACTGACCTTGGACGGGTGTTAAACCTCCCTATTCCACAGCCctcccagaggctctgacttagtatttagcaaggggctgagggattcttcattcatagc-aatgctcccaggt----aatAGTCGGACAGTTTCTGGAAGCACTAAATTA----------------------TTGAATTGTAAGCACTCATTTGCATCAGATGCTGTATAGGCTGCCACCTCAAAGTGTATAAAATGGGA-TAAAAACTAAATGAAAGTGG---ATTAAAACACTCTAAAAAA-AGTGTTGAGTTTGGGGTTGAGGCCTCAAATCAGTGATTATAAGAACAAAATTTCACTAGGATCTTAGAAT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172415123 716 + 174210431 -TATTTTTAATTTTCAGAATAAA---CTGTGAGGTTTGATATTGTTCAGAG---TTCACGCAACAAGT---CTTTCATCCTCATCTAGAAATATCTTTT----------CGAAGCCAGACCCTCTGTGGTTTCTCCTCCTTAACACAGACACTGAATGACATAACTGTGTGTTTGGGAAAACATCCTTTATATGGGTTCCCTGTCTGTCAATTAAGAAAGTGGTTCCATGAAAA----CACATCCTTTGTTTTATGAGCAGAATCAGAGATT-CCAGGGAGAAACAGGACCCAGGGAGATGAGAGCTTTCAGAGATACTGGAGAGCTTGGCTGGTCTGGG------TGTGAGGCCAGAGGAGGGGCCTCCCCT-CTCAGCATCTCAGTAGGACCACACCAGTCCAGCCTGACCA-CAGTGACCTTCAGGGGACTGACCTTGGACAGGTGTTAAACCTCCCTATTCCACAGCCctcccagaggctctgacttagtacttagcaaggggctgagggattcttcattcatagc-aatgctcccaggt----aatA----GACAGTTTCTGGAAGCACTAAATTA----------------------TTGAATTGTAAGCACTCATTTGCATCAGATGCTGTATAGGCTGCCACCTCAAAGTGTATAAAATGGGA-TAAAAACTAAATGAAAGTGG---ATTAAAACATTCTAAAAAA-GGTGTTGAGTTTGGGGTTGAGGCCTCAAATCAGTGATTATAAGAACAAAATTTCACTAGGATCTTAGAAG i ponAbe2.chr6 I 8 C 0 s nomLeu3.chr3 156282657 723 + 157873769 -CGTTTTTAATTTTCAAAATAAA---CTGTGAGATTTGATATTGTTCAGAG---TTCATGGAACAAGT---CTTTCATCCTCATCTAGAAATATCTTTT----------CAAGGCCAGAGCCTCTGTGGTTTCTCCTCCTTAACACAGACGCTGAATGACATAACTGTGTGTTTGGGAAAACATCCTTTGTAAGGGTTCTCTGTCTGTCAATTAAGAAAGTGCTTCCATGAAAA----CACATCCTTTGTTTTATGAGCAGAATCAGAGATTCCCAGGGAGAAACAGGACCCAGGGAGATGAGAGCTTTCAGAGATACCGGAGAGCTTGGCTGGTCTGGGTATCTCTGTGAGGCCAGAGGAGGGGCCT------CTCAGCATCTCAGTAGGACCACGCCAGTCCGGCCTGACCA-CAGTGACCTTCGGGGGACTGATCTTGGATGGGTGTTAAACCTCCCTATTCCACAGCCctcccaaaggctctgacttagtacttagcaaggggctgagggattcttcattcatagc-aatgctcccaggt----aatAGTCAGACAGTTTCTGGAAGCACTAAATTA----------------------TTGAATTGTAAGCACTCATTTGCATCAGATGCTGTATAGGCTGCCACCTCAAAGTGTATAAAACGGGA-TAAAAACTAAACGAAAGTGG---ATTAAAACATTCTAAAAAAAAGTGTTAAGTTTGGGGTTGAGGCCTCAAATCAGTGATTATAAGAACAACATTTCACTAGGCTCTTAGAAT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168098716 720 + 169853907 -CATTTTTAATTTTCAGAATAAA---CTGTGAGGTTTGATATTGTTCAGAG---TTCACGCAACAAGT---CTTTCATCCTCATCTAGAAATATCTTTT----------CAAGGCCAGAGCCTGTGTGGTTTCTCCTCCTTAACAGAAACACTGAATGACATAACTGTGTGTTTGGGACAACATCCTTTATAAGGGTTCCCCGTCTGTCAATTAGGAAAGTGGTTCCATGAAAA----CACATCCTTT-TTTTACGAGCAGAATCAGAGATT-CTGGGGAGAAACAGGACCCAGGGAGATGAGCGCTTTCAAAGATACCTGAGAGCTTGGCTGGTCTGGG------TGTGAGGCCAGAGGAGGGGCCCTCCCCGCTCAGCATCTCAGTAGGACCACGCCAGTCCGGCCCGACCA-CAGTGACCTTCAGGGGACTGACCTTGGATGGGTGTTAAACCCCCCTATTCCACAGCCCTCCCAGAGGCTCTGACTTAGGACTTAGCAAGGGGCTGAGGGGTTCTTCATTCATAGC-AATGCTGCCAGGT----AATAGTCGGACAGTTTCTGGAAGCACTAAATTA----------------------TTGAATTGTAAGCACTCATTGGCATCAGATGCTGTATAGGCTGCCTCCTCAAAGTGTATAAAATGGGA-TAAAAACTAAATGAAAGTGG---ATTAAAACATTCTAAAAAA-AGTGTTGAGTTTGGGATTGATGCCTCAAATTGGTGATTATAAGAACAAAATTTCACTAGGATCTTAGAAT i rheMac3.chr4 C 0 I 301 s macFas5.chr4 169054405 721 - 170955103 -CATTTTTAATTTTCAGAATAAA---CTGTGAGGTTTGATATTGTTCAGAG---TTCACGCAACAAGT---CTTTCATCCTCATCTAGAAATATCTTTT----------CAAGGCCAGAGCCTGTGTGGTTTCTCCTCCTTAACAGAAACACTGAATGACATAACTGTGTGTTTGGGACAACATCCTTTATAAGGGTTCCCCGTCTGTCAATTAAGAAAGTGGTTCCATGAAAA----CACATCCTTTGTTTTACGAGCAGAATCAGAGATT-CCGGGGAGAAACAGGACCCAGGGAGATGAGAGCTTTCAGAGATACCTGAGAGCTTGGCTGGTCTGGG------TGTGAGGCCAGAGGAGGGGCCCTCCCCGCTCAGCATCTCAGTAGGACCACGCCAGTCCGGCCCGACCA-CAGTGACCTTCAGGGGACTGACCTTGGATGGGTGTTAAACCCCCCTATTCCACAGCCCTCCCAGAGGCTCTGACTTAGGACTTAGCAAGGGGCTGAGGGGTTCTTCATTCATAGC-AATGCTGCCAGGT----AATAGTCGGACAGTTTCTGGAAGCACTAAATTA----------------------TTGAATTGTAAGCACTCATTGGCATCAGATGCTGTATAGGCTGCCTCCTCAAAGTGTATAAAATGGGA-TAAAAACTAAATGAAAGTGG---ATTAAAACATTCTAAAAAA-AGTGTTGAGTTTGGGATTGATGCCTCAAATTGGTGATTATAAGAACAAAATTTCACTAGGATCTTAGAAT i macFas5.chr4 C 0 I 301 s papAnu2.chr4 163872300 721 + 165299245 -cgtttttaattttcagaataaa---CTGTGAGGTTTGATATTGTTCAGAG---TTCATGCAACAAGT---CTTTCATCCTCATCTAGAAATATCTTTT----------CAAGGCCAGAGCCTGTGTGGTTTCTCCTCCTTAACAGAAACACTGAATGACATAACTGTGTGTTTGGGACAACATCCTTTATAAGGGTTCCCCGTCTGCCAATTAAGAAAGTGGTTCCATGAAAA----CACATCCTTTGTATTATGAGCAGAATCAGAGATT-CCGGGGAGAAACAGGACCCAGGGAGATGAGAGCTTTCAGAGATACCGGAGAGCTTGGCTGGTCTGGG------TGTGAGGCCAGAGGAGGGGCCCTCCCCGCTCAGCATCTCAGTAGGACCACGCCAGTCCGGCCCGACCA-CAGTGACCTTCAGGGGACTGACCTTGGATGGGTGTTAAACCCCCCTATTCCACAGCCCTCCCAGAGGCTCTGACTTAGTACTTAGCAAGGGGCTGAGGGATTCTTCATTCATAGC-AATGCTCCCAGGT----AATAGTCGGACAGTTTCTGGAAGCACtaaatta----------------------ttgaattgtaagcACTCATTGGCATCAGATGCTGTATAGGCTGCCTCCTCaaagtgtataaaatggga-taaaaactaaatgaaagtgg---attaaaacattctaaaaaa-aGTGTTGAGTTTGGGGTTGGTGCCTCAAATTGGTGATTATAAGAACAAAATTTCACTAGGATCTTAgaat i papAnu2.chr4 C 0 I 305 s chlSab2.chr13 96650098 720 + 98384682 -CGTTTTTAATTTTCAGAATAAA---CCGTGAGGTTTGATATTGTTCAGAA---TTCACGCAACAAGT---CTTTCATCTTCATCTAGAAATATCTTTT----------CAAGGCCAGAGCCTGTGTGGTTTCTCCTCCTTAACAGAAACACTGAATGACATAACTGTGTGTTTGGGACAACATCCTTTATAAGGGTTCCCCGTCTGTCAATTAAGAAAGTGGTTCCATGAAAA----CACATCCTTTGTTTTATGAGCAGAATCAGAGATT-CCGGGGAGAAACAGGACCCAGGGAGATGAGAGCTTTCAGAGATACCAGAGAGCTTGGCTGGTCTGGG------TGTGAGGCCAGAGGAGGGGCCCTCCCTGCTCAGCATCTCAGTAGGACCACGCCAGTCCGGCCCGACCA-CAGTGACCTTCAGGGGACTGACCTTGGATGGGTGTTAAACCCCCCTATTCCACAGCCctcccagaggctctgacttagtacttagcaaggggctgagggattcttcattcatagc-aatgctcccaggt----aatAGTCGGACAGTTTCTGGAAGCACTAAATTA----------------------TTGAATTGTAAGCACTCATTTGCATCAGATGCTGTATAGGCTGTCTCCTCAAAGTGTACAAAATGGGA-TAAAAACTAAATGAAAGTGG---ATTAAAACATTCT-AAAAA-TGTGTTGACTTTGGGGTTGATGCCTCAAATTTGTGATTATAAGAACAAAATTTCACTAGGATCTTAGAat i chlSab2.chr13 C 0 I 351 s calJac3.chr4 169858952 702 + 171630274 -TGTTTTTCATTTTCAAAAAAAAACGCTGTTCGGTTTGATATCCTCCAGAG---TTCATGCACAAA-----CCTTGGTTCTCACCTAGAAATATATTTT----------TAAGGCTGGTGCCTCTACGGCTTTTCCTCC---ACACAAACACTGAATGACGTAACTGTGTGTTTGGGAAAACACCCTTTAGAAGAGTTCCCTGTCTGTCAATTAAGAAAGTGGTTCCCTGAAAA----CACATCCTTTGTTTCCCGAGCAGAATGAGAAACT-CAGGGGAGAAACAGAGCCCAGGGAGATGGGAGCTTTCAGAGATACT-------------------GG---------------AGAGGAGGGACCTTCACCCCTCAGCGTCTCAGTAGGACCATGCCAGTCCTGCCCCACCA-CAGTGACCTTCAAGGAACTGACCTTGGACTGGTGTTAAAACTCCCTGTTCCACAGCCCCTCCCGAGGTTCTGACTGACTGCTTAGCGA-GGGCTGGGGG-----------ATAGCAAATGCTCCCAGGT----AACAGTCAGACCGTTTGTGAAAGCACTGAATTATTTCACTGTAAGCACGGAACTGTTGAATTGTAAGCACTCGTTCGCCTCGGATGCTGCGTAGGCTCCCCCCTCAAAGTGTATAAAATGGGATTAAAAACTAAATGAAGGTGG---ATTAAAACATGACAAAAAA--GTGTTGAGTTCTCGGTTGATGCCTCAAGTCAGTGATTATGAGAACAAAATTTCAATAGGATCTTAGAAT i calJac3.chr4 C 0 C 0 s canFam3.chr1 56156398 645 + 122678785 CAGCTTCTAATTTGCAAAATTAA---ATGTTAGGTTTGATACGGTTCAGAGGGACTCGTGCAGCTGATTTCTTCTCGTTCTCCTCTAGAAATATCGTTTGAAGGGTAAACACGGCCAGAGCCTCAAAGGCTGTTCCGCATTAACCCAG-CGCTGGAGTCGATAACCACCCGCTCAGGAAAACATCGTTTGTGTGAGGTCTCTGTCTCTTGATTAACACAGCGGTTCGGTGCAAAGTGTTTGTTTGTTTGTTTTAAGGACAGAATTGGGACTT-CTGGAGGGAGCAGAGTGCAGGGGGGACGGTGGTTTTCAGCGACAC--GGGAGCCT-GCCAGCGTGGG------CGCCAGGCC-----------------------------CGGCGGGACCGCA-CGGTGCTGCCCAAGCATCAGCGACCCT----------------GGTCACTGTTCAACCCGCCT--------------------------------------------GACTGGGGGCCTCCTGAT--------GGGGCCCCCAGCTATTCAATGGTTGGGCAACCTTTGGAAACGTTGACCC-----------------------CTGAATT-CACGCATCCGTCCATCTCAGACGATGGGCAGGCCGCCCCTTCTGAGGACATCG-GTGGAT-GAGAAGTGAAGTGAAGGAGGGTAACTAACGTGCGCTAAGCAA--GCAGTGGGGTTTGAGTTGGTGCCTCCTAGGAGTGATTGGAAGAATAGAACCTCACGAGGATCTTAGGAA i canFam3.chr1 C 0 C 0 a score=202471.000000 s hg38.chr6_KB021644v2_alt 82983 62 + 185823 AAATCCATGTTTTGACAAAGAACTTGAGAAAAGGCTGATATAAAGTAAATGCTTTGCATTTC s panTro4.chr6 170667377 62 + 172623881 AAATCCATGTTTTGACAAAGAACTTGAGAAAAGGCTGATATAAGGTAAATGCTTTGCATTTC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172415839 62 + 174210431 AAATCCATGTTTTGACATAGAACTTGAGAAAAGGCTGATATATGGTAAATGCTTTGTATTTC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156283380 62 + 157873769 AAATCCATGTTTTGACATAGAACTTGAGAAGAGGCTGATATAGGGTAAATGCTGTGTATTTC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168099737 62 + 169853907 AAATCCATGTTTTGACACAGAACTTGAGAAAAGGCTAATATAAGGTAAATGCTTTGTATTTC i rheMac3.chr4 I 301 C 0 s macFas5.chr4 169055427 62 - 170955103 AAATCCATGTTTTGACACAGAACTTGAGAAAAGGCTAATATAAGGTAAATGCTTTGTATTTC i macFas5.chr4 I 301 C 0 s papAnu2.chr4 163873326 62 + 165299245 aaatccaTATTTTGACACAGAACTTGAGAAAAGGCTGATATAAGGTAAATGCTTTGTATTTC i papAnu2.chr4 I 305 C 0 s chlSab2.chr13 96651169 62 + 98384682 aaatccatatTTTGACACAGAACTTGAGAAAAGGCTGATATAAGGTAAATGCTTTGTATTTC i chlSab2.chr13 I 351 C 0 s calJac3.chr4 169859654 62 + 171630274 GCATCCATGTTTTGACACAGAACTTGAAAAAAGGCTGATGTATGGCAAATACTTTGTATTTC i calJac3.chr4 C 0 C 0 s canFam3.chr1 56157043 62 + 122678785 GTTTCCTCGTGTGGACACACAGGTTGAGACAAGCCTGCTATGAGGCGAAGGGTTTGGAATTC i canFam3.chr1 C 0 I 382 a score=2820521.000000 s hg38.chr6_KB021644v2_alt 83045 1034 + 185823 TTCAGGATAATAA-TTTTGAGCAGCAATGAGTTCTGTTGAAGCAGAAGGTCTGTGAGTTTTCCCAGTGAGCTGG-GGAGCTGGGCCAGAG-CCCAGAGGCAGCACC-CGGCCCTAG--------GGGGGGCCTCTCCCTGGAGACCGGCCGCCCTGCCCAACGTGGGCAGCCCTATTCGGTCACTGTCATGAAGACGTTTGCATAGTTCCTCTTCCTTTGAAGGATTTCCCTCACATGCTCTATGGAGAAATGTTTAGATaagaaagaagatgggccaggtgcagtggttcatgcctgtagtcccagcactttgggaggctgaggtgggaggatcacttgcgcctgggaggtcaaggctgcagtgagctatgattgcaccactgcactccagcctgggtgacagagcgagactgtgtctcaaaaaag----aaaaagaaagaagaagaagaaaagaggaagaagaagaagaagaggagtggaggaaagaaaagatgaCAAATGTGAGGATGTTGCTAGGGTTCCAGGACACATCTGAGGCTG-----CAGTGCCCCTCGATGGGCACTGGAACCCCACACCGGTGCCTGGGGCTGTATTTTAACCCCCATTCCCGTCCCCACTCACTTCCCCAGCTTCTCCTCATCCTGCCAAATGGAGAAGCACAGTGGCCCCACCCCAGTACAGACCCCAAGAGATTGTCAAGAA---CACAGAGTCTTCACAAAGCATTGCCTCAGGACCCTTGAGGGATGCGCGGCCCCTGAGCCCCTGACACACAGGGTGAGCTGGTAGGAAGCGAAGCCCGCAGGCGAGTCCTCCCCTGTCATTTCCAGGCAGGGCCTGCTCCGTTGGTCATTCCCACTGGTGGCTCAGGTGTAATACGCACTTCCAAAGAATCTCAGCCCATAGAAGAAGCTTGTCTCCCTGGAGGACAGGGTGGGTAACTGTCCAGAAA-CATGTGCACATGAGGTGTGGAGAGGAGGCTTTCCTGCCCAGCTTGGGATCTGCAGGGGTGGGCAGAGGTGGCACAGGCCTTGTGGGCAGAGGTGGCACGGG s panTro4.chr6 170667439 1039 + 172623881 TTCAGGATAATAA-TTTTGAGCAGCAATGAGTTCCGTTGAAGCAGAAGGTCTGTGAGTTTTCCCAGTGAGCTGG-GGAGCTGGGCCAGAG-CCCAGAGGCAGCACC-CGGCCCTCG--------GGGGGGCCTCTCCCTGGAGACCGGCCGCCCTGCCCAACGTGGGCAGCCCCATTCGGTCACTGTCATGAAGACGTTTGCATAGTTCCTCTTCCTTTGAAGGATTTCCCTCACATGCTCTATGGAGAAATGTTTAGATAAGAAAGAAGATGGgccaggtgcagtggttcatgcctgtagtcccagcactttgggaggctgaggtgggaggatcacttgcgcctgggaggtcaaggctgcagtgagctatgattgcaccactgcactccagcctgggtgccggagcgagactgtgtctcaaaaaag----agaaagaaagaagaagaagaaaagaggaagaggaagaaga---ggaGTGGAGGAGAGAAAAGATGATAAATGTGAGGATGTTGCTAGGGTTCCAGGACACCTCTGAGGCTGGGCTGCAGTGCCCCTCGATGGGCACTGGAACCCCACACCGGCGCCTGGGGCTGTATTTTAACCCCCATTCCCGTCCCCACTCACTTCCCCAGCTTCTCCTCATCCTGCCAAACGGAGAAGCACAGTGGCCCCACCCCAGTACAGACCCCAAGAGATTGTCAAGAAGAACACAGAGGCTTCACAAAGCATTGCCTCAGGACCCTTGAGGGATGCGCGGCCCCTGAGCCCCTGACACACAGGGTGAGCTGGTGGGAAGCGAAGCCCGCAGGCGAGTCCTCCCCTGTCATTTCCAGGCAGGGCCTACTCCGTTGGTCATTCCCACTGGTGGCTCAGGTGTAATACGCACTTCCAAAGAATCTCAGCCCATAGAAGAAGCTTGTCTCCCTGGAGGACCGGGTGGGTAACTGTCCAGAAA-CATGTGCACATGAGGTGTGGAGAGGAGGCTTTCCTGCCCGGCTTGGGATCTGCAGGGGTGGGCAGAGGTGGCACGGGCCTTGTGGGCAGAGGTGGCACGGG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172415901 1048 + 174210431 TTCAGGATAATAA-TTTTGAGCAACCATGAGTTCCATTGAAGCAGAAGGTCCGTGAGTTCTCCCAGTGAGCTGG-GGAGCTGGGCCAGAG-CCCAGAGGAAGCACC-CGGCCCTGGGCGGGTCAGGGGGGTCCCTCCCTGGAGACCGGCCACCCTGCCCAACATGGGCAGCCCCATTCGGTCACTGTCATGAAGATGTTCACATAGGTCCTCTTCCTTTGAAGGATTTCCCTCACATGCTCTATGGGGAAATGTTTCGATAAGAAAGAAGACGGgccaggtgcagtggctcatgcctgtagtgtcagcactttgggaggctgaggtgggaggatcacttgagcctgggatgtcgaggctgcagtgagctatgattgccccactgccctccagcctgggtgacggagcgagactgtgtctcaaaaa------aaaaagaaagaagaagaagaaaagaggaagaagaagacaaagaggagtggaggaaagaaaagatgacaaacatgaggaTGTTGCTAGGGTTCCAGGACACATCTGAGGCTGGGCTGCAGTGCCCCTCGATGGGCACTGGGACCCCACACCAGCACCTGGGGCCATATTTTAACCCTCATTCCCGTCTCCACTCACTTCCCCAGCTTCTCCTCATCCTGCCAAGTGGAGAAGCACAGTGGCCCTACCGCAGTACAGACCCCAAGAGATTGTCAAGAAGAACACAGAGGCTTCACAAAGCATTGCCTCAGGACCCTTGAGGGATGCGCGGCCCCTGAGCCCCTGACACACAGGGTGAGCTGGTGGGAAGCGAAGCCCGCAGGCGAGGCCTCCCCTGTCATTTCCAGGCAGGGCCTGCTCCATTGGTCATTCCCACAGGCGGCTCAGGTGTAATACGCACTTCCAAAGAATCTCAGTCTGTAGAAGAAGCTTGTCTCCCTGGAGGACCGGGTGGGTGACTGTCCAGAAA-CATGTGCACGTGAGGTGTGGAGAGGAGGCTTTCCTGCCCGGCTTGGGATCTGCAGGGGTGGGCAGAGGTGGCACGGGCCTTGTCGGCAGAGGTGGCACGGG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156283442 1036 + 157873769 TTCAGGATAATAATTTTTGAGCAACCATGAGTTCCGTTGAAGCAGAAGGTCTGTGAGTTCTTCCAGTGAGCTGG-GGAGCTGGGTCAGAGCCCCAGAGGCAGCACCTCGGCCTT----------GGGGGTTCTCTCCCCGAAGACCGGCCA-CCTGCCCAACGCGGGCAGCCCCATTCAGTCACTGTCATGAAGACGTTCGCATAGTTCCTCTTCCTTTGAAGGATTTCCCTCACATGCTCTATGGGGAAATGTTTAGATAAGAGAGaagatgggccaggtgcagtggctcatgccggcagtcccagcac-ttgggaggctgaggtgggaggatcacttgaccctgagatgtcgaggctgcagtgagctttgattgcaccactgccctccagcctgggtgacggagcgagactgtgtctcaaaaaag----aaaaagaaagaagaagaagaaaaGAGGAATAAGAAGAAGA---GGAGTGGCGGAAAGAAAAGATGACAAACGTGAGGATATTGCTGGGGTTCCAGGACACCTCTGAGGCTGGGCTGCAGTGCCCCTCGATGGGCGCTGGGACCCCACACCAGTGCCTGGGGCTGTATTTTAACCCTCATTCCTGTCTCCACTCACTTCCCCAGCATCTCCTCATCCTGCCAAACGGAGAAGCATAGTGGCCCCACCCCAGTACAGACCCCAAGAGACTGTCAAGAAGAACACAGAGGCTTCACAAAGCATTGCCTCAGGACCCCTGAGGGATGC-CCGTCCCTGAGCCCCTGGCACACAAGGTGAGCT-GTGGGAAGCGAAGCCTGCAGGCGAGGCCTCCCCTATCATTTCCAGGCAGGGCCTGCTCCGTTGGTCATTCCCACAGGCGGCTCAGGTATAATACGCACTTCCAAAGAATCTCAGCCCATAGAAGAAGCTTGTCTCCCTGGAGGACCGGGTGGGTGACTCTCCAGAAA-CATGTGCACATGAGGTGTGGAGAGGAGGCTTTCCTGCCCGGCCTGGGATCTGCAGGGGTGGGCAGAGGTGGCATGAGCCTTGTGGGCAGAGGTGGCACGGG i nomLeu3.chr3 C 0 T 24 s rheMac3.chr4 168099799 1007 + 169853907 TTCAGGAGAATAA-TTTTGAGCAACCATGAGTTCTGTTGAAGCAGAAGGTCTGTGAGTTCTCCCAGTGAGTTAG-------------GAG----------AGCACC-CGGCCCT-----------GGGGGCCTCTCCCCGGAGACTGGCCACCCCACCCAACATAGGCAGCCCCATTCGGTCACTGTCATGAAGACGTTCACATAGTTCCTCTTCCTTTGAAGGATTTCCCTCACATGCTCTATGGGGAAATGTTTAGATAAGA---AAGACAGgccagatgcagtggtttatgcctgtggtcccagcgctttgggaggctgaggtgggaggatcagctaagcctgggaggtcaaggctgcattgagccgtgattgcaccactgcactccagcctgggtgacggagcgaggctatgtctcaaaatag----------aaaaaagaagaagaagaaaaGAGGCAGAAGAAGA---GGAGTGGAGGAAAGAAAAGATGACAAAGGTGAGTATGTTGGTAGGGTTCCAGGACACATATGAGGCTGGGCTGCAGAGCCCCTTGATGGGCGCTGGTACCCTACACTCATGCCAGGGGCCGTATTTTAACCCTCATTCCCATCTCCACTCACTTCCCCAGCTTCTCCTCATCCTGCCAAACGGAGAAGCACAGTGGCCCCACCCCAGAACAGACCCCAAGAGACGGTCAAGAAGAACACAGAGGCTTCACGAAGCATTGCCTCAGGACCCCTGAGGGATGCCTGGCTCCTGAGCCCCTGACACACCAGGTGAGCTGGTGGGAAGCGAAGCCTGCAGGCAAGGCCTCCCCGGTCATTTCCAGGCAGGGCCTGCTCCATTGGTCATCCCCATGGGCGGCTCAGGTGTAATACACACTTCCAAAGAATCTCAGCCCATAGAAGAAGCTTGTCTCCCTGGAGGACCAGGTGGGTGACTGTCCAAAAAGCAAGTGCACATGAGGCGTGGAGAGGAGGCTTTCCTGCCTGGCCTGGGATCTGCAGGTGTGGGCAGAGGTGGCACGGGCCTTGTGGGCAAAGGTGGCTCGGG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169055489 1007 - 170955103 TTCAGGAGAATAA-TTTTGAGCAACCATGAGTTCTGTTGAAGCAGAAGGTCTGTGAGTTCTCCCAGTGAGTTAG-------------GAG----------AGCACC-CGGCCCT-----------GGGGGCCTCTCCCCGGAGACTGGCCACCCCACCCAACATGGGCAGCCCCATTCGGTCACTGTCATGAAGACGTTCACATAGTTCCTCTTCCTTTGAAGGATTTCCCTCACATGCTCTATGGGGAAATGTTTAGATAAGA---AAGACAGgccagatgcagtggtttatgcctgtggtcccagcgctttgggaggctgaggtgggaggatcagctaagcctgggaggtcaaggctgcattgagccgtgattgcaccactgcactccagcctgggtgatggagcgaggctatgtctcaaaatag----------aaaaaagaagaagaagaaaaGAGGCAGAAGAAGA---GGAGTGGAGGAAAGAAAAGATGACAAAGGTGAGGATGTTGGTAGGGTTCCAGGACACATATGAGGCTGGGCTGCAGAGCCCCTTGATGGGCGCTGGTACCCTACACCCATGCCAGGGGCCGTATTTTAACCCTCATTCCCATCTCCACTCACTTCCCCAGCTTCTCCTCATCCTGCCAAACGGAGAAGCACAGTGGCCCCACCCCAGAACAGACCCCAAGAGACGGTCAAGAAGAACACAGAGGCTTCACGAAGCATTGCCTCAGGACCCCTGAGGGATGCCTGGCTCCTGAGCCCCTGACACACCAGGTGAGCTGGTGGGAAGCGAAGCCTGCAGGCAAGGCCTCCCCGGTCATTTCCAGGCAGGGCCTGCTCCGTTGGTCATCCCCATGGGCGGCTCAGGTGTAATACACACTTCCGAAGAATCTCAGCCCATAGAAGAAGCTTGTCTCCCTGGAGGACCAGGTGGGTGACTGTCCAAAAAGCAAGTGCACATGAGGCGTGGAGAGGAGGCTTTCCTGCCTGGCCTGGGATCTGCAGGTGTGGGCAGAGGTGGCACGGGCCTTGTGGGCAAAGGTGGCTCGGG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163873388 1006 + 165299245 TTCAGGAGAATAA-TTTTGAGCAGCCATGAGTTCTGTTGAAGCAGAAGGTCTGTGAGTTCTCCCAGTGAGTTAG-------------GAG----------AGCACC-CGGCCCT----------GGGGGGCCTCTCCCCGGAGACCGGCCACCCCACCAAACATGGGCAGCCCCATTCGGTCACTGTCCTGAGGACGTTCGCATAGTTCCTCTTCCTTTGAAGGATTTCCCTCACATGCTCTATGGGGAAATGTTTAGATAAGA---AAaacgggccaggtgcagtggtttatg--------cccagcactttgggaggctgaggtgggaggatcagctaagcctgggaggtcgagactgcagtgagccgtgattgtaccactgcactccagcctgggtgacggagcaaggctgtgtctcaaaaaag----aaaaaaaaaaaagaagaagaaaaaaagaggaagaagaaga---ggagcggaggaaagaaaagatgacAAAGGTGAGGATGTTGGTAGGGTTCCAGGACACATCTGAGGCTGGGCTGCAGAGCCCCTCGATGGGCGCTGGTACCCTACACCCATGCCAGGGGCCGTATTTTAACCCTCATTCCCATCTCCACTCACTTCCCCAGCTTCTCCTCATCCTGCCAAACGGGGAAGCACAGTGGCCCCACCCCAGAACAGACCCCAAGAGACGGTCAAGAAGAACACAGAGGCTTCACGAAGCATTGCCTCAGGACCCCTGAGGGATGCCTGGCTCCTGAGCCCCTGACACACCAGGTGAGCTGGTGGGAAGCGAAGCCTGCAGGCAAGGCCTCCCTGGTCATTTCCAGGCAGGGCCTGCTCTGTTGGTCATCCCCATGGGCGGCTCAGGTGTAATACACACTTCCGAAGAATCTCAGCCCATAGAAGAAGCTTGTCTCCCTGGAGGACCGGGTGGGTGACTGTCCAGAAAGTAAGTGCACGTGAGGCATGGAGAGGAGGCTTTCCTGCCTGGCCTGGGATCTGCAGGTGTGGGCAGAGGTGGCACAGGCCTTGTGGGCAGAGGTGGCACGGG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96651231 1010 + 98384682 TTCAGGAGAATAA-TTTTGAGCAGCCATGAGTTCTGTTGAAGCAGAAGGTCTGTGAGTTCCCCCAGTGAGTTAG-------------GAG----------AGCACC-CGGCCCT----------GGGGGGCCTCTCCCCGGAGACCAGCCACCCCACCAAACATGGGCAGCCCCATTCGGTCACTGTCCTGAAGACGTTCGCATAGTTCCTCTTCCTTTGAAGGATTTCCCTCACATGCTCTATGGGGAAATGTTTAGATAAGA---AAAACGACCCAGGTGCAGTGGTTTATG--------CTCAGCACTttgggaggctgaggtgggaggatcagctaagcctgggaggtcgagactgcagtgagccgtgattgtaccactgcactccagcctgggtgacggagcaaggctgtgtctcaaaaaaaaaaaaaaaaaaaaaaagaagaagaaaaaaagaggaagaagaaga---ggagtggaggaaagaaaagatgaCAAAGGTGAGGATGTTGGTAGGGTTCCAGGACACATCTGAGGCTGGGCTGCAGTGCCCCTCGATGGGCGCTGGTACCGTACACCCATGCCAGGGGCCATATTTTAACCCTCATTCCCATCTCCACTCACTTCCCCAGCTTCTCCTCATCCTGCCAAACAGAGAAGCACAGTGGCCCCACCCCAGAACAGACCCCAGGAGACTGTCAATAAGAACACAGAGGCTTCACGAAGCATTGCCTCAGGACCCCTGAGGGATGCCTGGCTCCTGAGCCCCTGACACACCAGGTGAGCTGGTGGGAAGCGAAGCCTGCAGGCAAGGCCTCCCCCGTCATTTCCAGGCAGGGCCTGCTCCGTTGGTCATCCCCATGGGCGGCTCAGGTGTAACACACACTTCCGAAGAATCTCAGCCCATAGAAGAACCTTGTCTCCCTGGAGGACCGGGTGGATGACTGTCCAGAAAGTAAGTGCACATGAGGCGTGGAGAGGAGGCTTTCCTGCCTGGTCTGGGATCTGCAGGTGTGGGCAGAGGTGGCATGGGCCTTGTGGGCAGAGGTGGCACGGG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169859716 1002 + 171630274 TTTGGTATAATAG-TTTTGAGCAACTGTGAGTTCCGGTGAAGCAGAAGTTCCATGAGTTCTCCCAGTGAGCTGGGGGAGCGGGGC--GAG----------AGCACC-CGGCCCT-----------GGAGGCCTCTCCCCGGAGGCCGGCCACCCTGCCCAACGTGGGCAGCCCCATTCGTTCAGTGTCGTGAAGACGTTTGCGTAGTTCCTCTTCCTTTGAAGGATTTTCCTCGCATGCTTCATGGGGAAATGTTTAGATAAGAAAAAAGACAGGGCAGGGGCAgtggctcaggcctgtagtcccagcactttgggaggctgaggtgggaggatcacttgagcctgggaggtcgaggctgcagtgagctgtgatttcaccactgcgttccatcctgggtggaggagaaagactgtgtctccaaaaag----aataa-aaagaagaagaaaacaaGAGAGAAGAGGAGGAGA---AGAA-GAAGGAAAGAACGGATGGCAAGCGTGGGGACGCTGCTACGCTGCCAGGACGTATCTGAGGCTGGCCTGTGGGGCCCCTCGTTGGGTGCTGGGAACCCACACTTGCACCTGGGGTCATATTTTAACCCTCATTCCTGTCTCCATTCACTTCCCCAGCTTCTCCTCATCCTGCCAAACAGGGAAGCTGCGCAGCCCTGCCCCAGTACAGACCCCA-GAGACTGTCGAGGAGAACGCAGAGGCTTCACCAAGCATTGCCTTAGGACCCGTGAG-------------------CCCCGACACACAAGGTGAGTTTGCAGGAAGCCAGGCCTGCAGGTGAGGCCT---TTGTCATTTCCAGGCGGGGCCTACTCCCTTGGTCATTTCCACGGGCGGCCCAGGTGTAATACTCATTTCCAAAGGATCTCAGTCCATGGAAGAAGCCTGCCTCCCTGGGGGACTGGGTGGGTGACTGCCCAGAAAGCATGTGCACATGAGGTGTAGAGAGAAGGCTTTCCTGCCCAGCCTGAGAGCTGCAGGTGTGGGCAGAGGAGGCATAGGCCTTGTGGGCAGAGGTGGCACTGG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I a score=63114.000000 s hg38.chr6_KB021644v2_alt 84079 21 + 185823 CCTTGTGGGCAGAGGTGGCAT s panTro4.chr6 170668478 21 + 172623881 CCTTGTGGGCAGAGGTGGCAT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172416949 21 + 174210431 CCTTTTGGGCAGAGGTGGCAT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156284454 21 + 157873769 CCTTGTGGGCAGAGGTGGCAC i nomLeu3.chr3 T 24 C 0 s rheMac3.chr4 168100806 21 + 169853907 CCTCGTGGGCAGAGGTGGCAT i rheMac3.chr4 C 0 T 24 s macFas5.chr4 169056496 21 - 170955103 CCTCGTGGGCAGAGGTGGCAT i macFas5.chr4 C 0 T 24 s papAnu2.chr4 163874394 21 + 165299245 CCTTGTGGGCAGAGGTGGCAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652241 21 + 98384682 CCTTGTGGGCAGAGGTGGCAT i chlSab2.chr13 C 0 T 66 s calJac3.chr4 169860718 21 + 171630274 TCTTGTGGGCAGAAGTGGTCT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I a score=6234.000000 s hg38.chr6_KB021644v2_alt 84100 5 + 185823 GGACC s panTro4.chr6 170668499 5 + 172623881 GGACC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172416970 5 + 174210431 GGGCC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156284475 5 + 157873769 GGGCC i nomLeu3.chr3 C 0 T 46 s rheMac3.chr4 168100803 5 + 169853907 GGGCC i rheMac3.chr4 T 24 C 0 s macFas5.chr4 169056493 5 - 170955103 GGGCC i macFas5.chr4 T 24 C 0 s papAnu2.chr4 163874415 5 + 165299245 AGGCC i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169860739 2 + 171630274 GG--- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I e chlSab2.chr13 96652262 66 + 98384682 T a score=1365.000000 s hg38.chr6_KB021644v2_alt 84105 1 + 185823 T s panTro4.chr6 170668504 1 + 172623881 T i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172416975 1 + 174210431 T i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168100808 1 + 169853907 T i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056498 1 - 170955103 T i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874420 1 + 165299245 T i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169860741 0 + 171630274 C e canFam3.chr1 56157105 382 + 122678785 I e chlSab2.chr13 96652262 66 + 98384682 T e nomLeu3.chr3 156284480 46 + 157873769 T a score=40450.000000 s hg38.chr6_KB021644v2_alt 84106 25 + 185823 TGTGGGAAGAGGTGGCATGGGCCTT s panTro4.chr6 170668505 25 + 172623881 TGTGGGCAGAGGTGGCACGGGCCTT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172416976 25 + 174210431 TGTGGACAGAGGTTGCATGGGCCTT i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168100809 25 + 169853907 CGTGGGCAGAGGTGGCATAGGCCTT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056499 25 - 170955103 CGTGGGCAGAGGTGGCATAGGCCTT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874421 25 + 165299245 CGTGGGCAGAGGTGGCATGGGCCTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652196 25 + 98384682 TGTGGGCAGAGGTGGCATGGGCCTT i chlSab2.chr13 T 66 C 0 s calJac3.chr4 169860741 4 + 171630274 ---------------------TCTT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 46 + 157873769 T a score=67593.000000 s hg38.chr6_KB021644v2_alt 84131 22 + 185823 GTGGGCAGAGGTGGCATGGGCC s panTro4.chr6 170668530 22 + 172623881 GTGGGCAGAGGTGGCATGGGCC i panTro4.chr6 C 0 T 118 s ponAbe2.chr6 172417001 22 + 174210431 GTGGGCAGAGGTTGCACGGGCC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156284434 22 + 157873769 GTGGGCAGAGGTGGCATGAGCC i nomLeu3.chr3 T 46 C 0 s rheMac3.chr4 168100834 22 + 169853907 GTGAGTAGAGGTGGCATGGGCC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056524 22 - 170955103 GTGAGTAGAGGTGGCATGGGCC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874446 22 + 165299245 GTGGGCAGAGGTGGCACGGGCC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652221 22 + 98384682 GTGGGCAGAGGTGGCACGGGCC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169860745 22 + 171630274 GTGGGCAGAGGTGGCATAGGCC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I a score=3641.000000 s hg38.chr6_KB021644v2_alt 84153 2 + 185823 TT s ponAbe2.chr6 172417023 2 + 174210431 TT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156284456 2 + 157873769 TT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168100856 2 + 169853907 TC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056546 2 - 170955103 TC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874468 2 + 165299245 TT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652243 2 + 98384682 TT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169860767 2 + 171630274 TT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I e panTro4.chr6 170668552 118 + 172623881 T a score=70420.000000 s hg38.chr6_KB021644v2_alt 84155 22 + 185823 GTGGGCAGAGGTGGCACGGGCC s panTro4.chr6 170668434 22 + 172623881 GTGGGCAGAGGTGGCACGGGCC i panTro4.chr6 T 118 C 0 s ponAbe2.chr6 172417025 22 + 174210431 TTGGGCAGAGGTGGCACGGGCC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156284458 22 + 157873769 GTGGGCAGAGGTGGCACGGGCC i nomLeu3.chr3 C 0 T 24 s rheMac3.chr4 168100858 22 + 169853907 GTGGGCAGAGGTGGCACGGGCC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056548 22 - 170955103 GTGGGCAGAGGTGGCACGGGCC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874470 22 + 165299245 GTGGGCAGAGGTGGCACGGGCC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652245 22 + 98384682 GTGGGCAGAGGTGGCATGGGCC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169860769 22 + 171630274 GGGGGCAGAGGTGGCACTGGTC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I a score=3276.000000 s hg38.chr6_KB021644v2_alt 84177 1 + 185823 T s panTro4.chr6 170668456 1 + 172623881 T i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172417047 1 + 174210431 T i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156284456 1 + 157873769 T i nomLeu3.chr3 T 24 C 0 s rheMac3.chr4 168100880 1 + 169853907 T i rheMac3.chr4 C 0 T 96 s macFas5.chr4 169056570 1 - 170955103 T i macFas5.chr4 C 0 T 96 s papAnu2.chr4 163874492 1 + 165299245 T i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652267 1 + 98384682 T i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169860791 1 + 171630274 T i calJac3.chr4 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I a score=49294.000000 s hg38.chr6_KB021644v2_alt 84178 16 + 185823 TGTGGGCAGAGGTGGC s panTro4.chr6 170668457 16 + 172623881 TGTGGGCAGAGGTGGC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172417048 16 + 174210431 TGTGGGCAGAGGTGGC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156284457 16 + 157873769 TGTGGGCAGAGGTGGC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168100785 16 + 169853907 TGTGGGCAAAGGTGGC i rheMac3.chr4 T 96 C 0 s macFas5.chr4 169056475 16 - 170955103 TGTGGGCAAAGGTGGC i macFas5.chr4 T 96 C 0 s papAnu2.chr4 163874493 16 + 165299245 CGTGGGCAGAGGTGGC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652268 16 + 98384682 CATAGGCAGAGGTGGC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169860792 16 + 171630274 TGTGGGCAGAGGTGGT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I a score=9599.000000 s hg38.chr6_KB021644v2_alt 84194 5 + 185823 ACGGG s panTro4.chr6 170668473 5 + 172623881 ACGGG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172417064 5 + 174210431 ACAGG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156284473 5 + 157873769 ACGGG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168100801 5 + 169853907 TCGGG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056491 5 - 170955103 TCGGG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874509 5 + 165299245 ACAGG i papAnu2.chr4 C 0 T 24 s chlSab2.chr13 96652284 5 + 98384682 ACGGG i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169860808 0 + 171630274 C e canFam3.chr1 56157105 382 + 122678785 I a score=5600.000000 s hg38.chr6_KB021644v2_alt 84199 2 + 185823 CC s panTro4.chr6 170668478 2 + 172623881 CC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172417069 2 + 174210431 CC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156284478 2 + 157873769 CC i nomLeu3.chr3 C 0 T 46 s rheMac3.chr4 168100806 2 + 169853907 CC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056496 2 - 170955103 CC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874490 2 + 165299245 CC i papAnu2.chr4 T 24 C 0 s chlSab2.chr13 96652289 2 + 98384682 CC i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169860808 0 + 171630274 C e canFam3.chr1 56157105 382 + 122678785 I a score=1911.000000 s hg38.chr6_KB021644v2_alt 84201 1 + 185823 T s panTro4.chr6 170668480 1 + 172623881 T i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172417071 1 + 174210431 T i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168100808 1 + 169853907 T i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056498 1 - 170955103 T i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874492 1 + 165299245 T i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652291 1 + 98384682 T i chlSab2.chr13 C 0 T 72 e calJac3.chr4 169860808 0 + 171630274 C e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 46 + 157873769 T a score=28579.000000 s hg38.chr6_KB021644v2_alt 84202 25 + 185823 TGTGGGAAGAGGTGGCATGGACCTT s panTro4.chr6 170668481 25 + 172623881 TGTGGGCAGAGGTGGCATGGACCTT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172417072 25 + 174210431 TTTGGGCAGAAGTGGCACGGGCCTT i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168100809 25 + 169853907 CGTGGGCAGAGGTGGCATAGGCCTT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056499 25 - 170955103 CGTGGGCAGAGGTGGCATAGGCCTT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874493 25 + 165299245 CGTGGGCAGAGGTGGCACAGGCCTC i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169860808 0 + 171630274 C e canFam3.chr1 56157105 382 + 122678785 I e chlSab2.chr13 96652292 72 + 98384682 T e nomLeu3.chr3 156284480 46 + 157873769 T a score=41103.000000 s hg38.chr6_KB021644v2_alt 84227 23 + 185823 GTGGGAAGAGGTGGCACGGGCCT s panTro4.chr6 170668506 23 + 172623881 GTGGGCAGAGGTGGCACGGGCCT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172417097 23 + 174210431 GTGGGCAGAGGTGGCACGGGCCT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156284434 23 + 157873769 GTGGGCAGAGGTGGCATGAGCCT i nomLeu3.chr3 T 46 C 0 s rheMac3.chr4 168100834 23 + 169853907 GTGAGTAGAGGTGGCATGGGCCT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056524 23 - 170955103 GTGAGTAGAGGTGGCATGGGCCT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874518 23 + 165299245 GTGGGCAGAGGTGGCACGGGCCT i papAnu2.chr4 C 0 T 192 e calJac3.chr4 169860808 0 + 171630274 C e canFam3.chr1 56157105 382 + 122678785 I e chlSab2.chr13 96652292 72 + 98384682 T a score=11827.000000 s hg38.chr6_KB021644v2_alt 84250 7 + 185823 TGTGGGC s panTro4.chr6 170668529 7 + 172623881 TGTGGGC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172417120 7 + 174210431 TTTGGGC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156284457 7 + 157873769 TGTGGGC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168100857 7 + 169853907 CGTGGGC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056547 7 - 170955103 CGTGGGC i macFas5.chr4 C 0 C 0 s chlSab2.chr13 96652220 7 + 98384682 TGTGGGC i chlSab2.chr13 T 72 C 0 e calJac3.chr4 169860808 0 + 171630274 C e canFam3.chr1 56157105 382 + 122678785 I e papAnu2.chr4 163874541 192 + 165299245 T a score=22805.000000 s hg38.chr6_KB021644v2_alt 84257 16 + 185823 AGAGGTGGCACGGGCC s panTro4.chr6 170668536 16 + 172623881 AGAGGTGGCATGGGCC i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156284464 16 + 157873769 AGAGGTGGCACGGGCC i nomLeu3.chr3 C 0 T 46 s rheMac3.chr4 168100864 16 + 169853907 AGAGGTGGCACGGGCC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056554 16 - 170955103 AGAGGTGGCACGGGCC i macFas5.chr4 C 0 C 0 s chlSab2.chr13 96652227 16 + 98384682 AGAGGTGGCACGGGCC i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169860808 0 + 171630274 C e canFam3.chr1 56157105 382 + 122678785 I e papAnu2.chr4 163874541 192 + 165299245 T e ponAbe2.chr6 172417127 0 + 174210431 C a score=910.000000 s hg38.chr6_KB021644v2_alt 84273 1 + 185823 T s panTro4.chr6 170668552 1 + 172623881 T i panTro4.chr6 C 0 C 0 s rheMac3.chr4 168100880 1 + 169853907 T i rheMac3.chr4 C 0 T 120 s macFas5.chr4 169056570 1 - 170955103 T i macFas5.chr4 C 0 T 120 s chlSab2.chr13 96652243 1 + 98384682 T i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169860808 0 + 171630274 C e canFam3.chr1 56157105 382 + 122678785 I e papAnu2.chr4 163874541 192 + 165299245 T e nomLeu3.chr3 156284480 46 + 157873769 T e ponAbe2.chr6 172417127 0 + 174210431 C a score=31161.000000 s hg38.chr6_KB021644v2_alt 84274 24 + 185823 TGTGCGCAGAGGTGGCACGGACCT s panTro4.chr6 170668553 24 + 172623881 TGTGGGCAGAGGTGGCATGGACCT i panTro4.chr6 C 0 C 0 s rheMac3.chr4 168100761 24 + 169853907 TGTGGGCAGAGGTGGCACGGGCCT i rheMac3.chr4 T 120 C 0 s macFas5.chr4 169056451 24 - 170955103 TGTGGGCAGAGGTGGCACGGGCCT i macFas5.chr4 T 120 C 0 s papAnu2.chr4 163874349 24 + 165299245 TGTGGGCAGAGGTGGCACAGGCCT i papAnu2.chr4 T 192 C 0 s chlSab2.chr13 96652244 24 + 98384682 TGTGGGCAGAGGTGGCATGGGCCT i chlSab2.chr13 C 0 T 72 e calJac3.chr4 169860808 0 + 171630274 C e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 46 + 157873769 T e ponAbe2.chr6 172417127 0 + 174210431 C a score=1365.000000 s hg38.chr6_KB021644v2_alt 84298 1 + 185823 T s panTro4.chr6 170668577 1 + 172623881 T i panTro4.chr6 C 0 C 0 s rheMac3.chr4 168100785 1 + 169853907 T i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056475 1 - 170955103 T i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874373 1 + 165299245 T i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652196 1 + 98384682 T i chlSab2.chr13 T 72 C 0 e calJac3.chr4 169860808 0 + 171630274 C e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 46 + 157873769 T e ponAbe2.chr6 172417127 0 + 174210431 C a score=82982.000000 s hg38.chr6_KB021644v2_alt 84299 46 + 185823 GTGGGCAGAGGTGGCACGGGCCTTGTGCGCAGAGGTGGCATGGGCC s panTro4.chr6 170668578 46 + 172623881 GTGGGCAGAGGTGGCACGGGCCTTGTGGGCAGAGGTGGCATGGGCC i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156284434 46 + 157873769 GTGGGCAGAGGTGGCATGAGCCTTGTGGGCAGAGGTGGCACGGGCC i nomLeu3.chr3 T 46 T 46 s rheMac3.chr4 168100786 46 + 169853907 GTGGGCAAAGGTGGCTCGGGCCTCGTGGGCAGAGGTGGCATAGGCC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056476 46 - 170955103 GTGGGCAAAGGTGGCTCGGGCCTCGTGGGCAGAGGTGGCATAGGCC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874374 46 + 165299245 GTGGGCAGAGGTGGCACGGGCCTTGTGGGCAGAGGTGGCACAGGCC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652197 46 + 98384682 GTGGGCAGAGGTGGCATGGGCCTTGTGGGCAGAGGTGGCACGGGCC i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169860808 0 + 171630274 C e canFam3.chr1 56157105 382 + 122678785 I e ponAbe2.chr6 172417127 0 + 174210431 C a score=1365.000000 s hg38.chr6_KB021644v2_alt 84345 1 + 185823 T s panTro4.chr6 170668624 1 + 172623881 T i panTro4.chr6 C 0 T 72 s rheMac3.chr4 168100832 1 + 169853907 T i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056522 1 - 170955103 T i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874420 1 + 165299245 T i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652243 1 + 98384682 T i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169860808 0 + 171630274 C e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 46 + 157873769 T e ponAbe2.chr6 172417127 0 + 174210431 C a score=755.000000 s hg38.chr6_KB021644v2_alt 84346 1 + 185823 T s panTro4.chr6 170668553 1 + 172623881 T i panTro4.chr6 T 72 C 0 s rheMac3.chr4 168100833 1 + 169853907 T i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056523 1 - 170955103 T i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874421 1 + 165299245 C i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652244 1 + 98384682 T i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169860808 0 + 171630274 C e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 46 + 157873769 T e ponAbe2.chr6 172417127 0 + 174210431 C a score=85911.000000 s hg38.chr6_KB021644v2_alt 84347 46 + 185823 GTGGGAAGAGGTGGCATGGGCCTTGTGGGCAGAGGTGGCACGGGCC s panTro4.chr6 170668554 46 + 172623881 GTGGGCAGAGGTGGCATGGACCTTGTGGGCAGAGGTGGCACGGGCC i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156284434 46 + 157873769 GTGGGCAGAGGTGGCATGAGCCTTGTGGGCAGAGGTGGCACGGGCC i nomLeu3.chr3 T 46 T 24 s rheMac3.chr4 168100834 46 + 169853907 GTGAGTAGAGGTGGCATGGGCCTCGTGGGCAGAGGTGGCACGGGCC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056524 46 - 170955103 GTGAGTAGAGGTGGCATGGGCCTCGTGGGCAGAGGTGGCACGGGCC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874422 46 + 165299245 GTGGGCAGAGGTGGCATGGGCCTCGTGGGCAGAGGTGGCACGGGCC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652245 46 + 98384682 GTGGGCAGAGGTGGCATGGGCCTCATAGGCAGAGGTGGCACGGGCC i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169860808 0 + 171630274 C e canFam3.chr1 56157105 382 + 122678785 I e ponAbe2.chr6 172417127 0 + 174210431 C a score=1911.000000 s hg38.chr6_KB021644v2_alt 84393 1 + 185823 T s panTro4.chr6 170668600 1 + 172623881 T i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156284456 1 + 157873769 T i nomLeu3.chr3 T 24 C 0 s rheMac3.chr4 168100880 1 + 169853907 T i rheMac3.chr4 C 0 T 96 s macFas5.chr4 169056570 1 - 170955103 T i macFas5.chr4 C 0 T 96 s papAnu2.chr4 163874468 1 + 165299245 T i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652291 1 + 98384682 T i chlSab2.chr13 C 0 T 48 e calJac3.chr4 169860808 0 + 171630274 C e canFam3.chr1 56157105 382 + 122678785 I e ponAbe2.chr6 172417127 0 + 174210431 C a score=41602.000000 s hg38.chr6_KB021644v2_alt 84394 23 + 185823 TGTGGGCAGAGGTGGCACGGACC s panTro4.chr6 170668601 23 + 172623881 TGTGGGCAGAGGTGGCATGGGCC i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156284457 23 + 157873769 TGTGGGCAGAGGTGGCACGGGCC i nomLeu3.chr3 C 0 T 46 s rheMac3.chr4 168100785 23 + 169853907 TGTGGGCAAAGGTGGCTCGGGCC i rheMac3.chr4 T 96 C 0 s macFas5.chr4 169056475 23 - 170955103 TGTGGGCAAAGGTGGCTCGGGCC i macFas5.chr4 T 96 C 0 s papAnu2.chr4 163874469 23 + 165299245 TGTGGGCAGAGGTGGCACGGGCC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652244 23 + 98384682 TGTGGGCAGAGGTGGCATGGGCC i chlSab2.chr13 T 48 C 0 e calJac3.chr4 169860808 0 + 171630274 C e canFam3.chr1 56157105 382 + 122678785 I e ponAbe2.chr6 172417127 0 + 174210431 C a score=1365.000000 s hg38.chr6_KB021644v2_alt 84417 1 + 185823 T s panTro4.chr6 170668624 1 + 172623881 T i panTro4.chr6 C 0 T 72 s rheMac3.chr4 168100808 1 + 169853907 T i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056498 1 - 170955103 T i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874492 1 + 165299245 T i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652267 1 + 98384682 T i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169860808 0 + 171630274 C e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 46 + 157873769 T e ponAbe2.chr6 172417127 0 + 174210431 C a score=28686.000000 s hg38.chr6_KB021644v2_alt 84418 24 + 185823 TGTGGGAAGAGGTGGCACGGGCCT s panTro4.chr6 170668553 24 + 172623881 TGTGGGCAGAGGTGGCATGGACCT i panTro4.chr6 T 72 C 0 s rheMac3.chr4 168100809 24 + 169853907 CGTGGGCAGAGGTGGCATAGGCCT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056499 24 - 170955103 CGTGGGCAGAGGTGGCATAGGCCT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874493 24 + 165299245 CGTGGGCAGAGGTGGCACAGGCCT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652268 24 + 98384682 CATAGGCAGAGGTGGCACGGGCCT i chlSab2.chr13 C 0 T 72 e calJac3.chr4 169860808 0 + 171630274 C e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 46 + 157873769 T e ponAbe2.chr6 172417127 0 + 174210431 C a score=755.000000 s hg38.chr6_KB021644v2_alt 84442 1 + 185823 T s panTro4.chr6 170668577 1 + 172623881 T i panTro4.chr6 C 0 C 0 s rheMac3.chr4 168100833 1 + 169853907 T i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056523 1 - 170955103 T i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874517 1 + 165299245 C i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652220 1 + 98384682 T i chlSab2.chr13 T 72 C 0 e calJac3.chr4 169860808 0 + 171630274 C e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 46 + 157873769 T e ponAbe2.chr6 172417127 0 + 174210431 C a score=35246.000000 s hg38.chr6_KB021644v2_alt 84443 20 + 185823 GTGGGCAGAGGTGGCACGGA s panTro4.chr6 170668578 20 + 172623881 GTGGGCAGAGGTGGCACGGG i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156284434 20 + 157873769 GTGGGCAGAGGTGGCATGAG i nomLeu3.chr3 T 46 C 0 s rheMac3.chr4 168100834 20 + 169853907 GTGAGTAGAGGTGGCATGGG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056524 20 - 170955103 GTGAGTAGAGGTGGCATGGG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874518 20 + 165299245 GTGGGCAGAGGTGGCACGGG i papAnu2.chr4 C 0 T 24 s chlSab2.chr13 96652221 20 + 98384682 GTGGGCAGAGGTGGCACGGG i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169860808 0 + 171630274 C e canFam3.chr1 56157105 382 + 122678785 I e ponAbe2.chr6 172417127 0 + 174210431 C a score=6585.000000 s hg38.chr6_KB021644v2_alt 84463 4 + 185823 CCTT s panTro4.chr6 170668598 4 + 172623881 CCTT i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156284454 4 + 157873769 CCTT i nomLeu3.chr3 C 0 T 24 s rheMac3.chr4 168100854 4 + 169853907 CCTC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056544 4 - 170955103 CCTC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874514 4 + 165299245 CCTC i papAnu2.chr4 T 24 C 0 s chlSab2.chr13 96652241 4 + 98384682 CCTT i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169860808 0 + 171630274 C e canFam3.chr1 56157105 382 + 122678785 I e ponAbe2.chr6 172417127 0 + 174210431 C a score=32655.000000 s hg38.chr6_KB021644v2_alt 84467 16 + 185823 GTGGGCAGAGGTGGCA s panTro4.chr6 170668602 16 + 172623881 GTGGGCAGAGGTGGCA i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156284434 16 + 157873769 GTGGGCAGAGGTGGCA i nomLeu3.chr3 T 24 C 0 s rheMac3.chr4 168100858 16 + 169853907 GTGGGCAGAGGTGGCA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056548 16 - 170955103 GTGGGCAGAGGTGGCA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874518 16 + 165299245 GTGGGCAGAGGTGGCA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652245 16 + 98384682 GTGGGCAGAGGTGGCA i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169860808 0 + 171630274 C e canFam3.chr1 56157105 382 + 122678785 I e ponAbe2.chr6 172417127 0 + 174210431 C a score=14024.000000 s hg38.chr6_KB021644v2_alt 84483 7 + 185823 CGGGCCT s panTro4.chr6 170668618 7 + 172623881 TGGGCCT i panTro4.chr6 C 0 T 191 s nomLeu3.chr3 156284450 7 + 157873769 TGAGCCT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168100874 7 + 169853907 CGGGCCT i rheMac3.chr4 C 0 T 72 s macFas5.chr4 169056564 7 - 170955103 CGGGCCT i macFas5.chr4 C 0 T 72 s papAnu2.chr4 163874534 7 + 165299245 CGGGCCT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652261 7 + 98384682 TGGGCCT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169860808 7 + 171630274 CTGGTCT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I e ponAbe2.chr6 172417127 0 + 174210431 C a score=422.000000 s hg38.chr6_KB021644v2_alt 84490 1 + 185823 T s nomLeu3.chr3 156284457 1 + 157873769 T i nomLeu3.chr3 C 0 C 0 s papAnu2.chr4 163874541 1 + 165299245 T i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652268 1 + 98384682 C i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169860815 1 + 171630274 T i calJac3.chr4 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I e rheMac3.chr4 168100881 72 + 169853907 T e ponAbe2.chr6 172417127 0 + 174210431 C e macFas5.chr4 169056571 72 - 170955103 T e panTro4.chr6 170668625 191 + 172623881 T a score=27325.000000 s hg38.chr6_KB021644v2_alt 84491 22 + 185823 GTGGGCAGAGGTGGCACGGACC s panTro4.chr6 170668434 22 + 172623881 GTGGGCAGAGGTGGCACGGGCC i panTro4.chr6 T 191 C 0 s nomLeu3.chr3 156284458 22 + 157873769 GTGGGCAGAGGTGGCACGGGCC i nomLeu3.chr3 C 0 T 46 s papAnu2.chr4 163874542 22 + 165299245 GTGGGCAGAGGTGGCATGGGCC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652269 22 + 98384682 ATAGGCAGAGGTGGCACGGGCC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169860816 22 + 171630274 GTGGGCAGAGGTGGTACTGGTC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I e rheMac3.chr4 168100881 72 + 169853907 T e ponAbe2.chr6 172417127 0 + 174210431 C e macFas5.chr4 169056571 72 - 170955103 T a score=910.000000 s hg38.chr6_KB021644v2_alt 84513 1 + 185823 T s panTro4.chr6 170668456 1 + 172623881 T i panTro4.chr6 C 0 C 0 s papAnu2.chr4 163874564 1 + 165299245 T i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652291 1 + 98384682 T i chlSab2.chr13 C 0 T 96 s calJac3.chr4 169860838 1 + 171630274 T i calJac3.chr4 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 46 + 157873769 T e rheMac3.chr4 168100881 72 + 169853907 T e ponAbe2.chr6 172417127 0 + 174210431 C e macFas5.chr4 169056571 72 - 170955103 T a score=58539.000000 s hg38.chr6_KB021644v2_alt 84514 48 + 185823 TGTGGGAAGAGGTGGCACGGACCTTGTGGGAAGAGGTGGCATGGACCT s panTro4.chr6 170668457 48 + 172623881 TGTGGGCAGAGGTGGCACGGGCCTTGTGGGCAGAGGTGGCATGGACCT i panTro4.chr6 C 0 C 0 s rheMac3.chr4 168100809 48 + 169853907 CGTGGGCAGAGGTGGCATAGGCCTTGTGAGTAGAGGTGGCATGGGCCT i rheMac3.chr4 T 72 T 96 s macFas5.chr4 169056499 48 - 170955103 CGTGGGCAGAGGTGGCATAGGCCTTGTGAGTAGAGGTGGCATGGGCCT i macFas5.chr4 T 72 T 96 s papAnu2.chr4 163874565 48 + 165299245 TGTGGGCAGAGGTGGCACGGGCCTCGTGGGCAGAGGTGGCATGGGCCT i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169860839 48 + 171630274 TGTGGGCAGAGGAGGCATGGGCCTTGTGGGCAGAGGTGGCATAGACCT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I e chlSab2.chr13 96652292 96 + 98384682 T e nomLeu3.chr3 156284480 46 + 157873769 T e ponAbe2.chr6 172417127 0 + 174210431 C a score=546.000000 s hg38.chr6_KB021644v2_alt 84562 1 + 185823 T s panTro4.chr6 170668505 1 + 172623881 T i panTro4.chr6 C 0 T 72 s papAnu2.chr4 163874613 1 + 165299245 T i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169860887 1 + 171630274 T i calJac3.chr4 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I e chlSab2.chr13 96652292 96 + 98384682 T e nomLeu3.chr3 156284480 46 + 157873769 T e rheMac3.chr4 168100857 96 + 169853907 T e ponAbe2.chr6 172417127 0 + 174210431 C e macFas5.chr4 169056547 96 - 170955103 T a score=2904.000000 s hg38.chr6_KB021644v2_alt 84563 6 + 185823 GTGGGA s panTro4.chr6 170668434 6 + 172623881 GTGGGC i panTro4.chr6 T 72 C 0 s papAnu2.chr4 163874614 6 + 165299245 GTGGGC i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169860888 6 + 171630274 GTGGGC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I e chlSab2.chr13 96652292 96 + 98384682 T e nomLeu3.chr3 156284480 46 + 157873769 T e rheMac3.chr4 168100857 96 + 169853907 T e ponAbe2.chr6 172417127 0 + 174210431 C e macFas5.chr4 169056547 96 - 170955103 T a score=14736.000000 s hg38.chr6_KB021644v2_alt 84569 18 + 185823 AGAGGTGGCACGGGCCTT s panTro4.chr6 170668440 18 + 172623881 AGAGGTGGCACGGGCCTT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172417127 18 + 174210431 AGAGGTGGCACGGTCCTT i ponAbe2.chr6 C 0 C 0 s papAnu2.chr4 163874620 18 + 165299245 AGAGGTGGCACGGGCCTC i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169860894 18 + 171630274 AGAGGTGGCACTGGTCTT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I e chlSab2.chr13 96652292 96 + 98384682 T e nomLeu3.chr3 156284480 46 + 157873769 T e rheMac3.chr4 168100857 96 + 169853907 T e macFas5.chr4 169056547 96 - 170955103 T a score=27737.000000 s hg38.chr6_KB021644v2_alt 84587 23 + 185823 GTGGGCAGAGGTGGCACGGACCT s panTro4.chr6 170668458 23 + 172623881 GTGGGCAGAGGTGGCACGGGCCT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172417145 23 + 174210431 GTGAGCAGAGGTGGCATGGGCCT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156284434 23 + 157873769 GTGGGCAGAGGTGGCATGAGCCT i nomLeu3.chr3 T 46 C 0 s papAnu2.chr4 163874638 23 + 165299245 GTGGGCAGAGGTGGCATGAGCCT i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169860912 23 + 171630274 GTGGGCAGAGGTGGTACTGGTCT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I e chlSab2.chr13 96652292 96 + 98384682 T e rheMac3.chr4 168100857 96 + 169853907 T e macFas5.chr4 169056547 96 - 170955103 T a score=2300.000000 s hg38.chr6_KB021644v2_alt 84610 1 + 185823 T s panTro4.chr6 170668481 1 + 172623881 T i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172417168 1 + 174210431 T i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156284457 1 + 157873769 T i nomLeu3.chr3 C 0 T 24 s rheMac3.chr4 168100761 1 + 169853907 T i rheMac3.chr4 T 96 C 0 s macFas5.chr4 169056451 1 - 170955103 T i macFas5.chr4 T 96 C 0 s papAnu2.chr4 163874661 1 + 165299245 C i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652196 1 + 98384682 T i chlSab2.chr13 T 96 C 0 s calJac3.chr4 169860935 1 + 171630274 T i calJac3.chr4 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I a score=137634.000000 s hg38.chr6_KB021644v2_alt 84611 46 + 185823 GTGGGCAGAGGTGGCACGGGCCTTGTGGGCAGAGGTGGCACGGACC s panTro4.chr6 170668482 46 + 172623881 GTGGGCAGAGGTGGCATGGACCTTGTGGGCAGAGGTGGCACGGGCC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172417169 46 + 174210431 TTGGGCAGAGGTGGCACAGTCCTCATGGGCAGAGGTGGCACGAGCC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156284434 46 + 157873769 GTGGGCAGAGGTGGCATGAGCCTTGTGGGCAGAGGTGGCACGGGCC i nomLeu3.chr3 T 24 T 46 s rheMac3.chr4 168100762 46 + 169853907 GTGGGCAGAGGTGGCACGGGCCTTGTGGGCAAAGGTGGCTCGGGCC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056452 46 - 170955103 GTGGGCAGAGGTGGCACGGGCCTTGTGGGCAAAGGTGGCTCGGGCC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874662 46 + 165299245 ATGGGCAGAGGTGGCACGGGCCTCGTGGGCAGAGGTGGCACGGGTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652197 46 + 98384682 GTGGGCAGAGGTGGCATGGGCCTTGTGGGCAGAGGTGGCACGGGCC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169860936 46 + 171630274 GTGGGCAGAGGTGGCATAGGCCTTGTGGGCAGAGGTGGCACTGGTC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I a score=2548.000000 s hg38.chr6_KB021644v2_alt 84657 1 + 185823 T s panTro4.chr6 170668528 1 + 172623881 T i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172417215 1 + 174210431 T i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168100808 1 + 169853907 T i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056498 1 - 170955103 T i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874708 1 + 165299245 T i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652243 1 + 98384682 T i chlSab2.chr13 C 0 T 48 s calJac3.chr4 169860982 1 + 171630274 T i calJac3.chr4 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 46 + 157873769 T a score=745.000000 s hg38.chr6_KB021644v2_alt 84658 1 + 185823 T s panTro4.chr6 170668529 1 + 172623881 T i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172417216 1 + 174210431 T i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168100809 1 + 169853907 C i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056499 1 - 170955103 C i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874709 1 + 165299245 C i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652196 1 + 98384682 T i chlSab2.chr13 T 48 C 0 s calJac3.chr4 169860983 1 + 171630274 T i calJac3.chr4 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 46 + 157873769 T a score=136525.000000 s hg38.chr6_KB021644v2_alt 84659 45 + 185823 GTGGGCAGAGGTGGCATGGGCCTTGTGGGCAGAGGTGGCACGGAC s panTro4.chr6 170668530 45 + 172623881 GTGGGCAGAGGTGGCATGGGCCTTGTGGGCAGAGGTGGCATGGAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172417217 45 + 174210431 TTGGGCAGAGGTGGCACGGGCCTTGTGGGCAGAGGTGGCACGGGC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156284434 45 + 157873769 GTGGGCAGAGGTGGCATGAGCCTTGTGGGCAGAGGTGGCACGGGC i nomLeu3.chr3 T 46 T 45 s rheMac3.chr4 168100810 45 + 169853907 GTGGGCAGAGGTGGCATAGGCCTTGTGAGTAGAGGTGGCATGGGC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056500 45 - 170955103 GTGGGCAGAGGTGGCATAGGCCTTGTGAGTAGAGGTGGCATGGGC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874710 45 + 165299245 GTGGGCAGAGGTGGCACGGGCCTCGTGGGCAGAGGTGGCATGGGC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652197 45 + 98384682 GTGGGCAGAGGTGGCATGGGCCTTGTGGGCAGAGGTGGCACGGGC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169860984 45 + 171630274 GTGGGCAGAGGTGGTACTGGTCTTGTGGGCAGAGGAGGCATGGGC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I a score=1883.000000 s hg38.chr6_KB021644v2_alt 84704 1 + 185823 T s panTro4.chr6 170668575 1 + 172623881 C i panTro4.chr6 C 0 T 24 s ponAbe2.chr6 172417262 1 + 174210431 C i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168100855 1 + 169853907 C i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056545 1 - 170955103 C i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874755 1 + 165299245 C i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652242 1 + 98384682 C i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169861029 1 + 171630274 C i calJac3.chr4 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284479 45 + 157873769 T a score=3293.000000 s hg38.chr6_KB021644v2_alt 84705 2 + 185823 TT s panTro4.chr6 170668552 2 + 172623881 TT i panTro4.chr6 T 24 C 0 s ponAbe2.chr6 172417263 2 + 174210431 TT i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168100856 2 + 169853907 TC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056546 2 - 170955103 TC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874756 2 + 165299245 TC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652243 2 + 98384682 TT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169861030 2 + 171630274 TT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284479 45 + 157873769 T a score=55194.000000 s hg38.chr6_KB021644v2_alt 84707 17 + 185823 GTGGGCAGAGGTGGCAC s panTro4.chr6 170668554 17 + 172623881 GTGGGCAGAGGTGGCAT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172417265 17 + 174210431 GTGGGCAGAGGTGGCAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156284434 17 + 157873769 GTGGGCAGAGGTGGCAT i nomLeu3.chr3 T 45 C 0 s rheMac3.chr4 168100858 17 + 169853907 GTGGGCAGAGGTGGCAC i rheMac3.chr4 C 0 T 48 s macFas5.chr4 169056548 17 - 170955103 GTGGGCAGAGGTGGCAC i macFas5.chr4 C 0 T 48 s papAnu2.chr4 163874758 17 + 165299245 GTGGGCAGAGGTGGCAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652245 17 + 98384682 GTGGGCAGAGGTGGCAT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169861032 17 + 171630274 GTGGGCAGAGGAGGCAT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I a score=60793.000000 s hg38.chr6_KB021644v2_alt 84724 24 + 185823 GGGCCTTGTGGGCAGAGGTGGCAC s panTro4.chr6 170668571 24 + 172623881 GGACCTTGTGGGCAGAGGTGGCAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172417282 24 + 174210431 AGTCCTTGTGGGCAGAGTTGGCAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156284451 24 + 157873769 GAGCCTTGTGGGCAGAGGTGGCAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168100827 24 + 169853907 AGGCCTTGTGAGTAGAGGTGGCAT i rheMac3.chr4 T 48 C 0 s macFas5.chr4 169056517 24 - 170955103 AGGCCTTGTGAGTAGAGGTGGCAT i macFas5.chr4 T 48 C 0 s papAnu2.chr4 163874775 24 + 165299245 GGGTCTCATGGGCAGAGGTGGCAT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652262 24 + 98384682 GGGCCTCATAGGCAGAGGTGGCAC i chlSab2.chr13 C 0 T 24 s calJac3.chr4 169861049 23 + 171630274 GGGCCTTGTGGGCAGAGGTGGCA- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I a score=14192.000000 s hg38.chr6_KB021644v2_alt 84748 5 + 185823 GGGCC s panTro4.chr6 170668595 5 + 172623881 GGGCC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172417306 5 + 174210431 AGTCC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156284475 5 + 157873769 GGGCC i nomLeu3.chr3 C 0 T 24 s rheMac3.chr4 168100851 5 + 169853907 GGGCC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056541 5 - 170955103 GGGCC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874799 5 + 165299245 GGGTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652262 5 + 98384682 GGGCC i chlSab2.chr13 T 24 C 0 s calJac3.chr4 169861072 5 + 171630274 GGGCC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I a score=71677.000000 s hg38.chr6_KB021644v2_alt 84753 24 + 185823 TTGTGGGCAGAGGTGGCATGGGCC s panTro4.chr6 170668600 24 + 172623881 TTGTGGGCAGAGGTGGCATGGGCC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172417311 24 + 174210431 TTGTGGGCAGAGGTGGCACGGGCC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156284456 24 + 157873769 TTGTGGGCAGAGGTGGCACGGGCC i nomLeu3.chr3 T 24 T 2 s rheMac3.chr4 168100856 24 + 169853907 TCGTGGGCAGAGGTGGCACGGGCC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056546 24 - 170955103 TCGTGGGCAGAGGTGGCACGGGCC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874804 24 + 165299245 TCGTGGGCAGAGGTGGCACGGGCC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652267 24 + 98384682 TCATAGGCAGAGGTGGCACGGGCC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169861077 24 + 171630274 TTCTGGGAAGAGGTGGCACAGGAC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I a score=239399.000000 s hg38.chr6_KB021644v2_alt 84777 107 + 185823 TGCCTTCAGGCCCTGGCAAGCCTCACCTGAAGTGCTCACGGCTCTCGCGCGCAGACATGGCTTCACCCCCACTG--------TGCACACTGGCGCTGGGCCCTGTAGGACAATGA s panTro4.chr6 170668624 107 + 172623881 TGGCTTCAGGCTCTGGCAAGCTTCACCTGAAGTGCTCGCGGCTCTCGCGCGCAGACATGGCTTCACCCCCACTG--------TGCACACTGGCGCTGGGCCCTGTAGGACAATGA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172417335 107 + 174210431 TGGCTTCAGGCCCTGGAAAGCTTCGCCTGAAGTGCTCGTGGCTCTCGTGTGCAGACGTGGCTTCACCCCCACTG--------TGCACACTGGCACTGAGCCCTAGAGGACAATGA i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168100880 107 + 169853907 TGGCTTCAGGCCCTGGCAAGCTTCGCCTGAAGTGCTCGCGGCTCTGGCGTGCAGACGTGGCTTTACCCCCACTG--------TGCACACTGGCACTGGGCCCTGGAGGACAACGA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056570 107 - 170955103 TGGCTTCAGGCCCTGGCAAGCTTCGCCTGAAGTGCTCGCGGCTCTGGCGTGCAGACGTGGCTTTACCCCCACTG--------TGCACACTGGCACTGGGCCCTGGAGGACAACGA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874828 107 + 165299245 TGGCTTCAGGCCCTGGCAAGCTTCGCCTGAAGTGCTCGTGGCTCTGGCGTGCAAACATGGCTTCACCCCCACTG--------TACACACTGGCACTGGGCCCTGGGGGACAACGA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652291 107 + 98384682 TGGCTTTAGGCCCTGGCAAGCTTCGCCTGAAGTGCTCGCGGCTCTGGCGTGCAAACATGGCTTCACCCCCACTG--------TACACACTGGCACTGGGCCCTGGGGGACAACGA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169861101 115 + 171630274 TTGCTTCAGGCCCTGCCACGCTTCACCTGAAGTGCTCTCAGCTCTGGCGCACTGACGTGGCTTCGCCCCAACTGTGCACACTTGCACACTGGCGCTGGGCTCTGGAGGACAGTGA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 2 + 157873769 T a score=1220562.000000 s hg38.chr6_KB021644v2_alt 84884 545 + 185823 GGCCACCGGCCTGAGCTTCCC---CACTGTCCCC----ACCTTGGACACCTTGGACCCCCAACTCCACAGAGC---AGGCTGCACCTGGAGCCCCAGCCCCACTCGGTGCTAACACGTCCTCAAGGGACTGCGTTTACTTTTGTTTTCCAGTTGAGTTTTTCCTTGTGTAAAACTGAAACATTTT--GTTTTGTTTTGCTTTTTTAAAATTTAAGCCAATTTTCTCTTTTTCAAACATCTGTGGATAAAGAAAATTACTTCTTAACA--CTTCATGAAGAACATTCATACTGTCGAA---AACAACAAGTGGATTCCCACCCTAATCTCCGTGTCTTCCTGCTTCCATCCCTTCACCTCTCTTGGTGGGT-T-AAGCTGA-TTTACTGAGTCTATTTCTAGCTTAATAATTAACCATAAACAGTGGCA---TTTTTCCTAAAGAAAGGAGAAGTCAGTGTCTCAAGTAGTTGTTGGGAGCAG--GCCTTCATCTGGAGACCCTGAAGGGCACCTGACCTTCCCCACCA---CCACCTTGAGAGGGGGT-------------------GAGGACAATCAGCAGGCGTGGGGAA--------------------------------------------------- s panTro4.chr6 170668731 545 + 172623881 GGCCACCGGCCTGAGCTTCCC---CACTGTCCCC----ACCTTGGACACCTTGGACCCCCAGCTCCACAGAGC---ACACTGCACCTGGAGCCCCAGCCCCACTCGGTGCTAACACGTCCTCAAGGGACTGCGTTTACTTTTGTTTTCCAGTTGAGTTTTTCCTTGTGTAAAACTGAAACATTTT--GTTTTGTTTTGCTTTTTCAAAATTTAAGCCAATTTTCTCTTTTTCAAACATCTGTGGATAAAGAAAATTACTTCTTAACA--CTTCATGAAGAACATTCATACTGTCCAA---AACAACAAGCGGATTCCCACCCTAATCTCCGTGTCTTCCCGCTTCCATCCCTTCGCCTCTCTTCGTGGGT-T-AAGCTGA-TTTACTGAGTCTATTTCTAGCTTAATAATTAACCATAAACAGTGGCA---TTTTTCCTAAAGAAAGGAGAAGTCAGTGTCTCAAGTAGTTGTTGGGAGCAG--GCCTTCATCTGGAGACCCTGAAGGGCACCTGACCTTCCCCACCA---TCACCTTGAGAGGGGGT-------------------GAGGACAATCAGCAGGCGTGGGGAA--------------------------------------------------- i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172417442 542 + 174210431 GGCCACCGGCCTGAGCTTCCC---CACTGTCCCC----ACCTTGGACACCTTGGACCCCCAGCTCCACAGAGC---AGGCTGCACCTGGAGCCCCAGCCCCACTAGGTGCTAACACATCCTCAAGGGACTGCGTTTACTTTTGTTTTCCAGTCAAGTTTTTCCTTGTGTAAAACTGAAACATTTT--GTTTTGTTTTGCTTTTTAAAAATTTAATCCAATTTTCTCTTTTTCAAACATCTGTGGATAAAGAAAATTACTTCTTAACA--CTTCATGAAGAACATTCATACTGTCAAA------AACAAGTGGATTCCCACCCTAATCTCTGCGTCTTCCCGCTTCCATCCCTTCGCCTCTCTTCGTGGGT-T-AAGCTGA-TTTACTGAGTCTATTTCTAGCTGAATAATTAACCATAAACAGTGGCA---TTTTTTCTAAAGAAAGGAGAAGTCAGTGTCTCAAGTAGTTGTTGGGAACAG--GCCTTCATCTGGAGACCCTGAAGGGCACCTGACCTTCCCCACCA---TCACCTTGAGACGGGGT-------------------GAGGACAATCAGCAGGTGTGGGGAA--------------------------------------------------- i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168100987 542 + 169853907 GGCCACCGGCCTGAGCTTCCC---CACTGTCCCC----ACCTTGG------TGTGGCCCCAGCTCCACAGAGC---AGGCTGCACCTGGAG-CCCAGCCCCGCTCGGAGCTAACACGTCCTCAGGGGACTGCGTTTACTT---TCTTCCAGTCAAGTTTTTACTTGTGTGAAACTGAAACATTTT--GTTTTGTTTTGCTTTTTTAAAATTTAAGCCAATATTCTCTTTTTCAAACATCTGTGGATAGAGAAAATTACTTCTTAACA--CTTCATGAAGAACATTCATACTGTCAAA---AACAACAAGCCCATTCCCACCCTAATCTCCGTGTCTTCCGACTTCCATCCCTTCGCCTCTCTTCATGGGT-T-AAGCTGATTTTACTGAGTCTATTTCTAGCTTAATAATTAACCATAAACAGTGGTATTTTTTTTTCTCAAGAAAGGAGAAGTCAGTGTCTCAAGTAGTTCTTGGGAGCAG--GCCTTCCTCTGGAGACCCTGAAGGGCACCTGACCTTCCCCGCCA---TCACCTTGAGAGGGGGTGA----------------GGAGGACAATCAGCGGGCATGGGGAA--------------------------------------------------- i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169056677 540 - 170955103 GGCCACCGGCCTGAGCTTCCC---CACTGTCCCC----ACCTTGG------TGTGACCCCAGCTCCACAGAGC---AGGCTGCACCTGGAG-CCCAGCCCCGCTCGGAGCTAACACGTCCTCAGGGGACTGCGTTTACTT---TCTTCCAGTCAAGTTTTTACTTGTGTGAAACTGAAACATTTT--GTTTTGTTTTGCTTTTTTAAAATTTAAGCCAATATTCTCTTTTTCAAACATCTGTGGATAGAGAAAATTACTTCTTAACA--CTTCATGAAGAACATTCATACTGTCAAA---AACAACAAGCCCATTCCCACCCTAATCTCCGTGTCTTCCGACTTCCATCCCTTCGCCTCTCTTCATGGGT-T-AAGCTGATTTTACTGAGTCTATTTCTAGCTTAATAATTAACCATAAACAGTGGTA--TTTTTTTCTCAAGAAAGGAGAAGTCAGTGTCTCAAGTAGTTCTTGGGAGCAG--GCCTTCCTCTGGAGACCCTGAAGGGCACCTGACCTTCCCCGCCA---TCACCTTGAGAGGGGGTGA----------------GGAGGACAATCAGCGGGCATGGGGAA--------------------------------------------------- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163874935 541 + 165299245 GGCCATCGGCCTGAGCTTCCC---CGCTGTCCCC----ACCTTGG------TGTGACCCCAGCTCCACAGAGC---AGGCTGCACCTGGAGCCCCAGTCCCGCTCAGAGCTAACACGTCCTCAAGGGACTGCGTTTACTT---TCTTCCAGTCAAGTTTCTACTTGTGTGAAActgaaacatttt--gttttgttttgcttttttaaaatttaagccaattttctctttttcaaacaTCTGTGGATAGAGAAAATTACTTCTTAACA--CTTCATGAAGAACATTCATACTGTCAAA---AACAACAAGCCCATTCCCACCCTAATCTCCGTGTCTTCCGACTTCCATCCCTTCGCCTCTCTTCATGGGT-T-AAGCTGATTTTACTGAGTCTATTTCTAGCTTAATAATTAACCATAAACAGTGgca--tttttttctcaagaaaGGAGAAGTCAGTGTCTCAAGTAGTTCTTGGGAGCAG--GCCTTTATCTGGAGACCCTGAAGGGCACCTGACCTTCCCCGCCA---TCACCTTGAGAGGGGGTGA----------------GGAGGACAATCAGCGGGCATGGGGAA--------------------------------------------------- i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652398 540 + 98384682 GGCCACCGGCCTGAGCTTCCC---CGCTGTCCCC----ACCTTGG------TGTGACCCCAGCTCCACAGAGC---AGGCTGCACCTGGAGCCCCAGTCCCGCTCAGAGCTAACACGTCCTCAAGGGACTGCGTTTACTT---TCTTCCAGTCaagtttctacttgtgtgaaactgaaacatttt--gttttgttttgcttttttaaaatttaagccaattttctctttttcaaacatctgtggatagagaaaattacttcttaaca--cttcatgaagaacattcataCTGTCAAA---AACAACAAGCCCATTCCCACCCTAATCTCCGTGTCTTCCGACTTCCATCCCTTCGCCTCTCTTCAC-GGT-T-AAGCTGATTTTACTAAGTCTATTTCTAGCTTAATAATTAACCATAAACAGTGGCA--TTTTTTTCTCAAGAAAGGAGAAGTCAGTGTCTCAAGTAGTTCTTGGGAGCAG--GCCTTCATCTGGAGACCCTGAAGGGCACCTGACCTTCCCCGCCA---TCACCTTGAGAGGGGGGGA----------------GGAGGACAATCAGTGGGCCTGGGGAA--------------------------------------------------- i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169861216 526 + 171630274 GGCCC---GCCGGAGCTTCCC---CGCTGTTCCT----GCCATG-------TCTGAACCCAGCCCCACAGAGC---AGGCTGCACCCGGAGCCCCAGCCCCACTCACTGCTGACACATCCTTGAGGGACCATGTTTACTCTTGTTTTCCAGTCAAGTTTTTCGCTGTGTGAAAC-AAAACATTTT--GTTTTGTTTTGCTTTTTAAAAATTTAAGCCAATTTTTTCTTTTTCAAACTTCTGTGGATAGAGAATATTAC-------CA--CTTCATGAAAAACATTCATACCGTCAAA---AGCAGCAAGCCGATTCCCACCCTAATCT--GTTTCTTCCCACCTCCATGCCATCCCCTCTATTCGCAGGT-TGAAGCTGATTTTACTGAGTCTATTTCTAGCTTAACAATTAACCATAAACAGTG-----TATTTTTCCAAGGAAAGGAGAAGCGAGAGTCTCGGGTAGTTCTTGGGAGCCG--GCCTTCCTTTGCAGACCCTGAGGGGCCCCTGACCTTCTCCA-CA---TCACCTCGAGA-GGGTTGA----------------GGAGGATAGTCAGCGGGCGTTGGGAA--------------------------------------------------- i calJac3.chr4 C 0 C 0 s canFam3.chr1 56157487 607 + 122678785 GGCTGCCAGCCGGGGCATCCAGCGCTCTGCTCCCTGGGCCCCCGGACCCCCGGGACCCCCGAACCCCCAGACCCCAAGGCCACAGC--GAG---CTGCCCCTCACGGCACTGGCACGTCCTCAAGAGCCAACGCTCGTGA---CTTTCTAGTCAGATTTTCCCTTGCGTAAAACTGAAACATTTCCATTTTTATTTTG----------ATGTAAGTCAATTTCCTCTTTTTCAAACTTTTATGGAGAGA-AAAATCAC---TTGACATTTTTCATCAAAAACATTCCCTCTGTCCATGCCAACCACAAGCCGATGCCGGCTGTGATCAGGGCCTCCCCAGGCAGCACCCCCTTTG------TGAACGAGTCT-AAATTCATCCTGGGGAGTCTCCCTCTAGCTCCACGGTTAGCGATAAACAGCAACA------TTTTAAAAAGGAGAAAAAGCGATCGTCCGAAACCGTTCTTGGGAGGCATTGTCTGCCTC-GGAGAGCCGGGAGCAGGCTTCATGCACCCCGGCAGGGGCGGGTTGAGGGACGATGATTAATACCAGACGTCCGGAGAACCACGTGAGCATGCGGGCAATCTTTCTTATTCAGTTATGCAGAATATTTAAAAGTAAGTGCTGTGTTGGAA i canFam3.chr1 I 382 I 16 e nomLeu3.chr3 156284480 2 + 157873769 T a score=1306879.000000 s hg38.chr6_KB021644v2_alt 85429 467 + 185823 CCC-AAAAGCTTTTGCTTTGATTCACAGGTATTTCAGTTTGTTTTTAGAGAAAGCATGTAGATTTTCTTCTTAGAGTCTGCCTTTGTGT-------------GTCAGATTCAATATCCCTAACACCATTGTTTTGGGGAGCAGAAGGAGGGAGCATCATGAACCTGCAGAATGAGGTTAT-GGTGGGATTATCCCGAGAGATACAGGAGGAGGAACATGCATTTC---TGCATTGAAGCAGAGTACACAGG---GCTTAGGTTTCCAGAGCCCTTTTTAGGGGTGCCG-TGAGAACCATGAGGATGCAGCTGA--------------AGCCCACC---TGGCCACGGGTGGCCCCACACCTTGCTCGCGGCCCAGAGCTCTCCCCCACTTGGCTGCACCCAGTGCTAGCCGCTGACCCCTGGG--GACGCAGCCAAGATAGGGCTAG-TGGTCACCTTAGAATAgggcaggggctggggctggggctggggct-------------------------ggAATGGGGCACAGAA s panTro4.chr6 170669276 461 + 172623881 CCC-AAAAGCTTTTGCTTTGATTCACAGGTATTTCAGTTTGTTTTTAGAGAAAGCATGTAGATTTTCCTCTTAGAGTCTGCCTTTGTGT-------------GTCGGATTCAATATCCCTAACACCATTGTTTTTGGGAGCAGAAGGAGGGAGCATCGTGAACCTGCAGAATGAGGTTAT-GGTGGGATTATCCCGAGAGATACAGGAGGAGGAACACGCATTTC---TGCATTGAAGCAGAGTACACAGG---GCTTAGGTTTCCAGAGCCCTTTTTAGGGGTGCCG-TGAGAACCATGAGGATGCAGCTGA--------------AGCCCACC---TGGCCACGGGTGGCCCCACACCTTGCTTGGGGCCCAGAGCTCTCCCCCACATGGCTGCACCCAGTGCCAGCTGCTGACCCCTGGG--GACACAGCCAAGACAGGGCTAG-TGGTCACCTTAGAATAgggcaggggctggggctggggctgg-------------------------------AATGGGGCACAGAA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172417984 509 + 174210431 CCC-AAAAGCTTTTGCTTTGATTCACAGGTATTCCAGTTTGTTTTTAGAGAAAGCATGTAGATTTTCCTCTTAGAGTCTGCCTTTGTGT-------------GTTGGATTCAATATCCCTAACACCACTGTTTTTGGGAGCAGAAGGTGGGAGCATTGTGAACCTGCAGAATGAGGTTAT-GGTGGGATTATCCCGAGAGATACAGGAGGAGGAACATGCATTTC---TGCATTGAAGCAGAGTACACAGG---GCTTAGGTTTCCAGAGCCCTTTTTAGGGGTGCCG-TGAGAACCATGAGGATGCAGCTGAGGAGAACCATGAGGAGGCCACCATGGGGCCCCTGGTGGCCCCACACCTTGCTCGGGGCCCAGAGCTCTCCCCCACGTGGCTGCACCCACTGCCAGCCGCTGACCCCTGGG--GACGTGGCCAAGACAGGGCTAG-TGGTCGCCTTAGAACAgggcaggggcaggggctggggctggggctggggctggggctgggcctggggctggggctggggcACAGAA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156284478 460 + 157873769 CCG-AAAAGCTTTTGCTTTGATTCAGAGGTATTTCAGTTTGTTTTTAGAGAAAGCATGTAGATTTTCCTCTTAGAGTCTGCCTTTGTGT-------------GTCGGATTCAATATCCCTAACACCATTGTTTTTGGGAGCAGAAGGAGGGAGCATCGTGAACCTGCAGAATGAGGTTAT-GGTGGGCTTACCCCAAGAGATACAGGAGGACGAACACGCATTTC---TGCATTGAAGCAGAGTACGCAGG---GCTTAGGTTTCCAGAGCCCTTTTTA-GGGTGCCG-TGAGAACCATGAGGATGCAGCTGA--------------AGCCCACC---TGGCCACGGGTGGCCCCACACCTTGCTCGGGGCCCAGAGCTCTCCCCCACATGGCTGCACCCAGTGCCAGCCGCTGACCCCTGGG--GACGCGGCCAAGACAGGGCTAG-TGGTCACCTTAGAATAgggcaggggctgggactggggctgg-------------------------------aatggggcACAGAG i nomLeu3.chr3 T 2 C 0 s rheMac3.chr4 168101529 460 + 169853907 CCC-AAAAACTTTTGCTTTGATTCACAGGTGTTTCAGTTTGGTTTTAGAGAAAGCATGTAGATTTCCCTCTTAGAGTTTGCCTTTGTGT-------------GTCAGATTCAATATCTCTAACACTACTGTTGTTGGGAGCAGAAGGAGGGAGCATCGTGAACCTACAGAATGAGGTTAT-GATGGGATTATCCTGAGAGGTACAGGAGGAAGAACACCCATTTC---TGCACCGAAGCAGAGTAAACAAG---GCTTAGGTTTCCAGAGCCCTTTTCAGAGGCGTCG-TGAGAACCATGAGGATGCAGCTGA--------------AGCCTGCC---TGACCACGGATAGCCCCACACCTTGCTCGGGGACCAGGGCTCTCCCCCACGTGGCTGTACCCAGTGCCAGCCGCTGATCCCTGGG--GACGCGGCCAAGGCAGGGCTAG-TGGTCGACTTAGAATAGGGCA-GGGCTGGGACTGGGGCTAG-------------------------------GATGATGCACAGAA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169057217 460 - 170955103 CCC-AAAAACTTTTGCTTTGATTCACAGGTGTTTCAGTTTGTTTTTAGAGAAAGCATGTAGATTTCCCTCTTAGAGTTTGCCTTTGTGT-------------GTCAGATTCAATATCTCTAACACTACTGTTTTTGGGAGCAGAAGGAGGGAGCATCGTGAACCTACAGAATGAGGTTAT-GATGGGATTATCCTGAGAGGTACAGGAGGAAGAACACCCATTTC---TGCACTGAAGCAGAGTAAACAAG---GCTTAGGTTTCCAGAGCCCTTTTCAGAGGCGTCG-TGAGAACCATGAGGATGCAGCTGA--------------AGCCTGCC---TGACCACGGATAGCCCCACACCTTGCTCGGGGACCAGGGCTCTCCCCCACGTGGCTGTACCCAGTGCCAGCCACTGATCCCTGGG--GACGCGGCCAAGGCAGGGCTAG-TGGTCACCTTAGAATAGAGCA-GGGCTGGGACTGGGGCTAG-------------------------------GATGATGCACAGAA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163875476 458 + 165299245 CCC-AAAAAC--TTGCTTTGATTCACAGgtgtttcagtttgtttttagagaaagCATGTAGATTTCCCTCTTAGAGTTTGCCTTTGTGT-------------GTCAGATTCAATATCTCTAACACCACTGTTTTTGGGAGCAGAAGGAGGGAGCATCGTGATCCTGCAGAATGAGGTCAT-GATGGGATTATCCTGAGAGGTACAGGAGGAGGAACAACCATTTC---TGCACTGAAGCAGAATAAACAAG---GCTTAGGTTTCCAGAGCCCTTTTTAGAGGTGTCG-TGAGAACCATGAGGATGCAGCTGA--------------AGCCCGCC---TGACCACGGATGGCCCCACACCTTGCTCGGGGACCAGGGCTCTCCCCCACGTGGCTGCACCCAGTGCCAGCCGCTGATCCCTGGG--GATGCAGCCAAGGCAGGGCTAG-TGGTCGCCTTAGAATAGGGCA-GGGCTGGGACTGGGGCTAG-------------------------------GATGATGCACAGAA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96652938 461 + 98384682 CCCAAAAAACTTTTGCTTTGATTCACAGGTGTTTCAGCTTGCTTTTAGAGAAAGCGTGTCGATTTTCCTCTTAGAGTTTGCCTTTGTGT-------------GTCAGATTCAATATCTCTAACACTACTGTTTTTGGGAGCAGAAGGAGGGAGCCTCGTGAACCTGCAGAATGAGGTTAT-GATGGGATTATCCTGAGAGGTACAGGAGGAAGAACACCCATTTC---TGCATGGAAGCAGAGTACACAAG---GCTTAGGTTTCCAGAGCCCTTTTTAGGGGTGTCG-TGAGAACCATGAGGACGCAGCTGA--------------AGCCCGCC---TGACCACGGATGGCCCCACACCTTGCTCGGGGACCAGGGCTCTCCCTGACGTGGCTGCACCCAGTGCCAGCCGCTGATCCCTGGG--GACGCGGCCAAGGCAGGGCTAG-TGGTCTCCTTAGAATAGGGCA-GGGCTGGGACTGGGGCTGG-------------------------------GATGATGCACAGAA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169861742 428 + 171630274 CCC-AAAAGCTTTTGCTTTGATTCATGGGCATTTCCGTTTG-TTTTAGAGAAAGCACAGAGGCTTTCCTCTTAGAGTTTTCC-TTGTGT-------------GTTGGATTCAATATCCTTAATGCTGTTGTTTTTGGGAGCAGAAGGAGGGAGCATCGTGACCCTGCAGAATGAGATCAT-GATGGGATT-TCCTGAGAGACAGAGGAGGAGGAACCTGCATTCC---TGTGTT-AAACAGAGTACACGGG---ATGTAGGTTTCCAGAGCTCTTCTTAGGGGTGTCA-TGAGAACCATGAGGGTGCAGCTGC--------------CATCCACC---TGGCCACAGGTGGCCTCACACC-TGCTCAGGGCTCGGGGTTCTCCACCACGTGGCT----CCAGTGTCGGC-GCTGACCCTTG-------------------GGGCTAG-TGGTAGCCTTAGAATAGGGCATCGGCTGGGTCTGG-------------------------------------GATGGGGCAGAGAA i calJac3.chr4 C 0 C 0 s canFam3.chr1 56158110 451 + 122678785 CCT-CAAAGCTTTGGGTTTGATTTACAGATGTTACCGTTTTGTTCTAGAGAAA--AAGCAATTGTCCCTCATAGAATCTACCTTCATATAGACAGGAGAGGGGTCTGAATCCAT-CCCCCGATGTGATTGTTTTCAGGGAGAGGAGG-GGTAATGTTGCAACCTCGCAGGATGAGATCATCTGAGAGCTTATCCCAAGAGATGAAGGAGAAAGGTTATGCATGCCCGTTGCATCTAAGCAGAGTA-ATAGGTTTTTTTTAATTTCCAGAGGTGTTTTTAGGGATTTGGACTAGAAAAATAAGAATGAGGCCGG--------------AG---GTG---TTTCTGTAGGTAGGCTCCCAGCTGGCTC------------------CCAGGTGAAGGGAGCAAAAATAGTTGCCTGCTCCTTGAGCTGATGTAGCCAACACAGAGCTGGCCCGTCACCTTGGA-----GCA---ACCACGACTGGGAATGG-------------------------------GACGAAGCAGAGGA i canFam3.chr1 I 16 I 1239 a score=30622.000000 s hg38.chr6_KB021644v2_alt 85896 10 + 185823 TAACCATCCT s panTro4.chr6 170669737 10 + 172623881 TAACCATCCT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172418493 10 + 174210431 TAACCATCCT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156284938 10 + 157873769 TAACCATCCT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168101989 10 + 169853907 TAGCCATCCT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169057677 10 - 170955103 TAGCCATCCT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163875934 10 + 165299245 TAGCCATCCT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96653399 10 + 98384682 TAGCCATCCT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169862170 10 + 171630274 TAACCATCTT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56158561 1239 + 122678785 I a score=3946237.000000 s hg38.chr6_KB021644v2_alt 85906 1240 + 185823 CTTCACAGCTCAA------CAGG-GCCTTTTGTTCTGTTTTTACATTTAATACTG----TGATTCCAGTAGACATCTACCTGATCCAAAGTTACAATGTCCCAGAGTAGTCCACAGACTGTGAATCTGAGACCTTTCACATAACCTAGCCAAACGGTTCTGA-GCTGTCATGAT---------------------------CCAGAAAAAATATCTTCTGAGAAAGAAAATGAAAGTGAAAGTAATCGGAGGAAAGGCCAGATAAATTTCATTTGCACAAAGCACAAGGATTCTTCCCAAAGGTTCCAGAT-----GGGGG--GACTTCTGTTTAGGGTCTGACAGATCACAGCTCACCTGTTTTATTATGAAGCATGACTGCTCACCAGGCTC---TACTGCTGAACAGGACCTGTTCCGAATTCAGACTTGGCTAGTAAAAGCTCTATAATAAAAACAATTCTTTGATGTCAAATCCCAGCACATAAAATCCCAAAATATGCTTTTACTAAGGTGAACGAGTGAATGGTTTGGATTAACATGTGAACAGTTACAAATGTCAGAGGCTGGGAGGGATATTAACTCAACTGGAAATTTCACTCAAGCCAGGTGTCTGGTTTAAATTTGAAGAGTTGAATATATTAAATATGCTTTATTGAGCTGTCATGCATGAAATTGCATCCTTATGTATC-GGACAAACATCGGATGGATTTCCCAGAAGTTTGTGGGAGACCGAC-AGTCTTTTGGAGACATGGAGGAGAAGACCTTGTCTCCACCCGCCTCGTGCATAGACCTAGAGCCCGGCCAAGCCTGGGGACACCAAGTCCTAGGCAG-ATGCTGCCC-GTGGGGCTGCTGACACCCT----GGGCCAGCGGGCTTTTCCACGGAGAATGGAAACGGCCTGGAC--TGAAACTGCACAGGGGCAGCAGAGTCAACAGGGCAGCTGCTCTCCCTGTGGGAAGCGAAAG-AGCAACTCTTACTCTCTCTGCAGAGGACATTTGGAGGGTTCTCCAGCTGCAGCCATCACTCTTCTCTCTATTCCCGAAACAGGGAGCCCCACT-GCTGGGAAGAGACAAACACAGGTGCTGTGTGGAGTGGCATGGCAGATAGAA-TTGAACCATACACATCGGGATT--ATGACACTTTTGCCTTTTAAGATTGATA-TTTTTAAATCAAAATTTAAGCTACAGAATAGACAACAAAATATTTTGAGAAACAGCATTATCGAAGATCTATTTGATGT-ATTAATTTATGAAATTCCATAGGAATCACCTTTTCTGCAAATACTCTCTC s panTro4.chr6 170669747 1240 + 172623881 CTTCACAGCTCAA------CAGG-GCCTTTTGTTCTGTTTTTACATTTAATACTG----TGATTCCTGCAGACATCTACCTGATCCAAAGTTACAATCTCCCAGAGTAGTCCACAGACTGTGAATCTGAGACCTTTCACATAACCTAGCCAAATGGTTCTGA-GCTGTCATGAT---------------------------CCAGAAAAAATATCTTCTGAGAAAGAAAATGAAAGCGAAAGTAATCAGAGGAAAGGCCAGATAAATTTCATTTGCGCAAAGCACAAGGATTCTTCCCGAAGGTTCCAGAT-----GGGGG--GACTTCTGTTTAGGGTCTGACGGATCACAGCTCACCTGTTTTATTACGAAGCATGACTGCTCACCAGGCTC---TACTGCTGAACAGGACCTGTTCTGAATTCAGACTTGGCTAGTAAAAGCTCTATAATAAAAACAATTCTTTGATGTCAAATCCCAGCACATAAAATCCCAAAATATGCTTTTACTAAGGTGAACGAGTGAATGGTTTGGATTAACATGTGAACAGTTACAAATGTCAGAGGCTGGGAGGGATATTAACTCAACTGGAAATTTCACTCAAGCCAGGTGTCTGGTTTAAATTTGAAGAGTTGAATATATTAAATATGCTTTATTGAGGTGTCATGCATGAAATTGCATCCTTATGTATC-GGACAAACATCGGATGGATTTCCCAGAAGTTTGTGGGAGACCAAC-AGTCTTTTGGAGACACGGAGGAGAAGACCTTGTCTCCACCCCCCTCATGCATAGACCTAGAGCCCGGCCAAGCCTGGGGACACCAAGTCCTAGGCAG-ATGCTGCCC-GTGGGGCTGCTGACACCCT----GGGCCAGCGGGCTTTTCCACGGAGAATGGAAACGGCCTGGGC--TGAAACTGCACAGGGGCAGCAGAGTCAACAGGGCAGCTGCTCTCCCTGTGGGAAGCGAAAG-AGCAACTCTTACTCTCTCTGCAGAGGACATTTGGAGGGTTCTCCAGCTGCAGCCATCACTCTTCTCTCTATTCCCGAAACAGGGAGCCCCACT-GCTGGAAAGAGACAAACACAGGTGCTGTGTGGAGTGGCATGGCAGATAGAA-TTGAACCATACACATCGGGATT--ATGACACTTTTGCCTTTTAAGATTGATA-TTTTTAAATCAAAATTTAAGCTACAGAATAGACAACAAAATATTTTGAGAAACAGCATTATCGAAGATCTATTTGATGT-ATTAATTTATGAAATTCCATAGGAATCACCTTTTCTGCAAATACTCTCTC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172418503 1216 + 174210431 CTTCACAGCTCAA------CAGG-GCCTTTTGTTCTGTTTTTACATTTAATACTC----TGATTCCAGTAGACATCTACCTGATCCAAAGTTACGGTCTCCCAGAGTAGTCCACAGACTGTGAATCTGAGACCTTTTACATAACCTAGCCAAACCGTCCTGA-GCTGTCATGAT---------------------------CCAGAAAAAATATCTTCTGAGAAAGAAAATGAAAGCAAAAGTAATCGGAGGAAAGGCCAGATAAATTTCATTTGCACAAAGCACAAGGATTCTTCCCGAAGGTTCCAGAT-----GGGGG--GACTTCTGTTTAGGGTCTGACAGATCACAGCTCACCTGTTTTATTACGAAGCATGACTGCTCACCAGGCTC---TACTGCTGAACACAACCTGTTCTGAATTCAGACTTGGCTAGTAAAAGCTCTATAATAGAAACAATTCTTTGATGTCCAATCCCAGCACATAAAATCCCAAAATATGCTTTTACTAAGGTGAACGAGTGAATGGTTTGGATTAACATGTGAACAGTTACAAATGTCAGAGGCTGGGAGGGATATTAACTCAACTGGAAATTTCACTCAAGCCAGGTGTCTGGTTTAAATTTGAGGAGTTGAATATATTAAATATGCTTTATTGAGCTGTCATGCATGAAATTGCATCCTTATGTATC-GGACAAACATCGGATGGATTTCCCAGAAGTTTGTGGGAGACCGAC-AGTCTTTTGGAGACATGGAGGAGAAGACCTTGTCTCAACCCCCCTCGTGCGTAGACCTAGTGCCCGGCCAAGCCTGGGGACACCAAGTCCTAGGCAG-ATGCTGTCC-GTGGGGCTGCTAACACCCT----GGGCCAGCGAGCTTTTCCACGGAGAATGGAAACGGCCTGGGC--TGAAACTGCACAGGGGCAGCAGAGTC-------------------------GAAGCAAAAG-AGCAACTCTTACTCTCTCTGCAGAGGACATTTGGAGGATTCTCCAGCTGCAGCCATCACTCTTCTCTCTATTCCCAAAACAGGGAGCCCCACTGGCTGGAAAGAGACAAACACAGGTGCTGTGTGGAGTGGCATGACAGATAGAA-TCGAACCATACACATCGGGATT--ATGACACTTTTGCCTTTTAAGATTGATA-TTTTTAAATCAAAATTTAAGATACAGAATAGACAACAAAATATTTTGAGAAACAGCATTATTGAAGAGCTATTTGATGT-ATTAATTTATGAAATTCCATAGGAATCACCTTTTCTGCAAATACTCTCTC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156284948 1220 + 157873769 CTTCGCAGCCCAA------CAGG-GCCTTTTGTTCTGTTTTTACATTTAATACTC----TGATTCCAGTA-----------GATCCAAAGTTACAGTCTCCCAGAGTAGGCCACAGACTGTGAATCTGAGACGTTTTACATAACCTAGCCAAACCATCCTGA-GCTGTCATGAT---------------------------CCAGAAAAAATCTCTTCTGAGAAAGAAAATGAAAGCGAAAGTAATCGGAGGAAAGGCCAGATAAATTTCATTTGCACAAAGCACAGGGATGCTTCCCGAAGTTTCCAGATGGGGGGGGGG--GACTTCTGTTTAGGGTCTGACGGATCACAGCTCACCTGTTTTATTACAAAGCATGACTGCTCACCAGGCTC---TGCTGCTGAACACAACCTGTTCTGAATTCAGACTTGGCTAGTAAAAGCTCTATAATAAAAACAATTCTTTGATGTCCAATCCCGGCACATAAAATCCCAAAATATGCTTTTACTAAGGTGAACGAGTGAATGGTTTGGATTAACATGTGAACAGTTACAAATGTCAGAGGCTGGGAGGGATATTAACTCAACTGGAAATTTCACTCAAGCCAGGTGTCTGGTTTAAATTTGAGGAGTTGAATATATTAAATATGCTTTATCGAGCTGTCGTGCATGAAATTGCATCCTTATGTATT-GGACAAACATCGGATGGATTTCCCAGAAGTTTGTGGGAGACCGAC-AGTCTTTGGGAGACGTGGAGGAGAAGACCTTGTCTCAGCCCCCCTCGTGCATAGACCTAGAGCCCGGCCAAGCCTGGGGACAGCAAGTCCTAGGCAG-ATGCTGCCC-CTGGGGCGGCTGACACCCT----GGGCCAGCGGGCTCTTCCACGGAGAATGGAAACGGCCTGGGC--TGAAACTGCCCAGGGGCAGCAGAGTCAACCGGGCAGCTGCTCTCCCTGTGGGAAGCGAAAG-AGCAACTCTTACCCTCTCTGCAGAGGACATTTGGAGGGTTCTCCAGCTGCAGCCATCGCTCGTCTCTCTATTCCCGAAGCAGGGAGCCCCACTGGCTGGAAAGAGACAAACACAGGTGCTGTGTGGAGTGGCATGGCAGATAGAA-TCGAACCGTACACAACGGGAGT--ATGACACGTTTGCCTTTTAAGATTGATA-TTTTTAAATCAAAATTTAAGCTACAGAATAGACAACAAAATATTTTGAGAAA------TGTTGAA---------GATGT-ATTAATTTATGAAATTCCATAGGAATCACCTTTTCTGCAAATACTCTCTC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168101999 1236 + 169853907 CTTCGTAGTTCAA------CAGG-GCCTTTTGTTCTGTTTGTACGTTTAATACTCTT--TGATTCCAGCAGACATCTGCCTGATCCAAAGTTACAGTCTCCCAGAGGAGTCCCCAGACTGTGAATCTGAGACCTTTTTCATCACCTGGCCAAACCGGCCTGA-GCTGTCATGAT---------------------------CCAGAAAAAGTCTCCTCTGAGAAAGAAAATGAAAGCGAAAGTAATAGGAGGAAAGGCCAGATGAGTTTCATTGGCACAAAGCACAGGGATTCTTCCCAAAGGCTCCAGAT-----GGGGG--GACCTCGGTTTAGGGCCTGACGGATCACAGCTCACCTGTTTTATTACGAAGCATGACTGCTCACCAGGCTC---TGCTGCTGAACACGGCCTGTTCTGAATTCAGACTTGGCTAGTAAAAGCTCTATAATAAAAACAATTCTTTGATGTCCAATCCCAGCACATAAAATCCCAAAATACGCTTTTACTAAGGTGAACGAGTGAATGGTTTGGGTTAACATGTGAACAGTTACAAATGTCAGAGGCTGGGAGGGATATTAACTCAACTGGAAATTTCACTCAAGCCAGGTGTCTGGTTTAAATTTGAGGAGTTGAATATATTAAATATGCTTTATTGAGCTGTCATGCATGAAATTGCATCCTTATGTATC-GGACAAACATCAGATGGATTTCCCAGAAGTTTGTGGGAGACCGAC-GGTCTTTTGGAGATGCGG---AGAAGACCTTGTCTCAACCACCCTCGTGCATAGACCTAGACCCCGGCCAAGCCTGGGGACACCAAGTCCTAGGCAG-ATGCTGCCC-ACGGGGCTGCCGACACCCT----GGGCCCGTGGGCTCTTCCACGGAGAATGGAAACAGTCTGGGC--TGAAACTGCACAAGGACAGCAGAGTCAACAGGGCAGCTGCTCTCTCTGCGGGAAGCGAAAG-AGCAACTCTTACTCTCTCTGCAGAGGACATTTGGAGGGTTCTCCAGCTACAGCCATCACTCTTCTCTCTATTCCTGAAACAGGGAGTCCCACTGGCTGGAAAGAGACAAACACAAGGGCTGTGCGGAGTGGCAGGGCAGACAGCA-TCGAACCGTACGCATCGGGAGT--ATGACACTTTTGCCGTTTAAGACTGGTA-TTTTTACATCAAAATTTAAGCTACAGAATAGACAACAAAATATTTTGAGAAACAGCATTATTAAAGATCC----GATAT-ATTAATCTGTGAAATTCCACAGGAATCACCATTTCTGCAAATATTCTCTC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169057687 1236 - 170955103 CTTCGTAGTTCAA------CAGG-GCCTTTTGTTCTGTTTGTACGTTTAATACTCTT--TGATTCCAGCAGACATCTGCCTGATCCAAAGTTACAGTCTCCCAGAGGAGTCCCCAGACTGTGAATCTGAGACCTTTTTCATCACCTGGCCAAACCGGCCTGA-GCTGTCATGAT---------------------------CCAGAAAAAGTCTCCTCTGAGAAAGAAAATGAAAGCGAAAGTAATAGGAGGAAAGGCCAGATGAGTTTCATTGGCACAAAGCACAGGGATTCTTCCCGAAGTCTCCAGAT-----GGGGG--GACCTCGGTTTAGGGCCTGACGGATCACAGCTCACCTGTTTTATTACGAAGCATGACTGCTCACCAGGCTC---TGCTGCTGAACACGGCCTGTTCTGAATTCAGACTTGGCTAGTAAAAGCTCTATAATAAAAACAATTCTTTGATGTCCAATCCCAGCACATAAAATCCCAAAATACGCTTTTACTAAGGTGAACGAGTGAATGGTTTGGGTTAACATGTGAACAGTTACAAATGTCAGAGGCTGGGAGGGATATTAACTCAACTGGAAATTTCACTCAAGCCAGGTGTCTGGTTTAAATTTGAGGAGTTGAATATATTAAATATGCTTTATTGAGCTGTCATGCATGAAATTGCATCCTTATGTATC-GGACAAACATCAGATGGATTTCCCAGAAGTTTGTGGGAGACCGAC-GGTCTTTTGGAGATGCGG---AGAAGACCTTGTCTCAACCCCCCTCGTGCATAGACCTAGACCCCGGCCAAGCCTGGGGACACCAAGTCCTAGGCAG-ATGCTGCCC-ACGGGGCTGCCGACACCCT----GGGCCCGTGGGCTCTTCCACGGAGAATGGAAACGGTCTGGGC--TGAAACTGCACAAGGACAGCAGAGTCAACAGGGCAGCTGCTCTCTCTGCGGGAAGCGAAAG-AGCAACTCTTACTCTCTCTGCAGAGGACATTTGGAGGGTTCTCCAGCTACAGCCATCACTCTTCTCTCTATTCCTGAAACAGGGAGTCCCACTGGCTGGAAAGAGACAAACACAAGGGCTGTGTGGAGTGGCAGGGCAGACAGCA-TCGAACCGTACGCATCGGGAAT--ATGATACTTTTGCCGTTTGAGACTGGTA-TTTTTAAATCAAAATTTAAGCTGCAGAATAGACAACAAAATATTTTGAGAAACAGCATTATTAAAGATCC----GATAT-ATTAATCTGTGAAATTCCACAGGAATCACCATTTCTGCAAATATTCTCTC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163875944 1240 + 165299245 CTTCGTAGTTCAA------CAGG-GCCTTTTGTTCTGTTTGTACGTTTAATACTCTT--TGATTCCAGCAGACATCTGCCTGATCCAAAGTTACAGTCTCCCAGAGGAGTCCCCAGACTGTGAATCTGAGACCTTTTTCATCACCTGGCCAAACCGGCCTGA-GCTGTCATGAT---------------------------CCAGAAAAAGTCTcctctgagaaagaaaatgaaagcgaAAGTAATAGGAGGAAAGGCCAGATGAGTTTCATTTGCACAAAGCACAGGGATTCTTCCCGAAGGCTCCAGAT-----GGGGG--GACTTCGGTTTAGGGTCTGACGGATCACAGCTCACCTGTTTTATTACGAAGCATGACTGCTCACCAGGCTC---TGCTGCTGAACACAGCCTGTTCTGAATTCGGACTTGGCTAGTAAAAGCTCTGTAATAAAAACAATTCTTTGATGTCCAATCCCAGCACATAAAATCCCAAAATACGCTTTTACTAAGGTGAACGAGTGAATGGTTTGGGTTAACATGTGAACAGTTACAAATGTCAGAGGCTGGGAGGGATATTAACTCAACTGGAAATTTCACTCAAGCCAGGTGTCTGGTTTAAATTTGAGGAgttgaatatattaaatatgctTTATTGAGCTGTCATGCATGAAATTGCATCCTTATGTATC-GGACAAACATCAGATGGATTTCCCAGAAGTTTGTGGGAGACCGAC-GGTCTTTTGGAGATGCGGAGaagaagaccttgtctcaacCCCCCTCGTGCATAGACCTAGAGCCCAGCCAAGCCTGGGGACACCAAGTCCTAGGCAG-ATGCTGCCC-ACGGGGCTGCCGACACCCT----GGGCCTGTGGGCTCTTCCACGGAGAATGGAAACGGTCTGGGC--TGAAACTGCACAGGGACAGCAGAGTCAACAGGGCAGCTGCTCTCCCTGGGGGAAGCAAAAG-AGCAACTCTTACTCTCTCTGCAGAGGACATTTGGAGGGTTCTCCAGCCGCAGCCATCACCCTTCTCTCTATTCCTGAAACAGGGAGTCCCACTGGCTGGAAAGAGACAAACACAGGGATTGTGCAGAGTGGCATGGCAGACAGCA-TCGAACCATATGCATCGGGAAT--ATGATACTTTTGCCGTTTAagattgatattttttaaatcaaaatttaagcTACAGAATagacaacaaaatattttgagaaacagcACTATGAAAGATCC----GATAT-ATTAATCTATGAAATTCCACAGGAATCACCATTTCTGCAAATACTCTCTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96653409 1235 + 98384682 CTTCGTAGTTCAA------CAGG-GCC-TTTGTTCTGTTTGTACGTTTAATACTCTT--TGATTCCAGCAGACATCTGCCTGATCCAAAGTTACAGTCTCCC--AGGAGTCCCCAGACTGTGAATCTGAGACCCTTTTCATCACCTGGCCAAACCGTCCTGA-GCTGTCAAGAT---------------------------CCAGAAAAAATCTCCTCTGAGAAAGAAAATGAAAGCGAAAGTAATAGGAGGAAAGGCCAGATGAGTTTCATTTGCACAAAGCACAGGGATTCTTCCCGAAGGCTCTAGAT-----GGGGG--GACCTCGGTTTAGGGCCTGACGGATCACAGCTCACCTGTTTTATTACGAAGCATGACTGCTCACCAGGCTC---TGCTGCTGAACACAGCCTGTTCTGAATTCAGACTTGGCTAGTAAAAGCTCTGTAATAAAAACAATTCTTTGATGTCCAATCCCAGCACATAAAATCCCAAAATACGCTTTTACTAAGGTGCACGAGTGAATGGTTTGGGTTAACATGTGAACAGTTACAAATGTCAGAGGCTGGGAGGGATATTAACTCAACTGGAAATTTCACTCAAGCCAGGTGTCTGGTTTAAATTTGAGGAGTTGAATATATTAAATAAGCTTTATTGAGCTGTCATGCATGAAATTGCATCCTTATGTATC-AGACAAACATCAGATGGATTTCCCAGAAGTTTGTGGGAGTCCGAC-GGTCTTTTGGAGATGCGGAGAAGAAGACCTTGTCTCAACCCCCCTCGTGCATAGACCTAGACCCCGGCCAAGCCTGGAGACACCAAGTCCTAGGCAG-ATACTGCCC-ACGGGGCTGCTGACACCCT----GGGCCCGTGGGCTCTTCCATGGAGAATGGAAACGGTCTGGGC--TGAAACTGCACAGGGACAGCAGAGTCAACAGGGCAGCTGCTCTCCCTGCGGGAAGCGAAAG-AGCAACTCTTACTCTCTCTGCAGAGGACATTTGGAGAGGTCTCCAGCTGTAGCCATCACGCTTCTCTCTATTCCTGAAACAGGGAGTCCCACTGGCTGGAAAGAGACAAACACGGGAGCTGTGTGGAGTGGCATGGCAGACAGCA-TTGAATCATAGGCATCGCGATT--ATGATACTTTTGCCGTTTAAGACTGGTA-TTTTTAAATCAAAATTTAAGCTACAGAATAGAC-ACAAAATATTTTGAGAAACAGCATTATGAAAGATCT----GATAT-ATTAATTTATGAAATTCCACAGGAATCACCATTTCTGCGAATACTCTCTC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169862180 1255 + 171630274 CTTCACAGCTCAT------GAGG-GCCATTTGTTCTGTTTTTCCATTTAATACTCTT--GGATTCCCAGAGACATCTACCTGGTCCA--------GTCTCCCAGAGCAGTCCACAGACCGTGAACCTGAGACCTGTTA---GACGTAGCCAAATCATCCTGA-GCCGTCATGATCCGGAAAATATCTCTTTTGAGAAAGACCCAGAAAAAACATCTTCTGAGAAAGAAAACGAAAGCAAAAGTAATCGGGGGAAAGGCAAGATAAATTTCATTTGCACAAAGCACAGGGACT-TTTCCGAAGGTTCCAGAT---TGGGGGG--GACTTGGGTTTAGGGTCTGATGGATCACAGCTCACCTGTTTTATTACGGAGCATGACTGCTCACCAGGCTC---TGCTGCTGAACGCTGTCTGTTCTGAATTCAGACTTGGCCAGTTAAAGCTCTATAATAAAAACAATTCTTTGATGTCCAATCCCAGCACATAAAATCCCAAACTATGCTTTTACTAAGGTGAATGAGCAAATGGTTTGGGTTAACATGTGAACAGTTACAAATGTCAGAGGCTGGGAGGGATATTAACTCAACTGGAAATTTCACTCAAGCCAGGTGTCTGGTTTAAATTTGAGGAGCTGAATATATTAAATATGCTTTATTGAGCTGTCATGCGTGAAATTGCATCCTTATGTATC-GGACAGATCTTGCATGGGTTTCCCAGAAGCTTGTGGGAGACCGAC-GGTCTTTTGGAGACACGGAGGAGAAAACCTTGTCTCAACCGCCCTCATGCACGGACCTAGAGCCCAGCCACGCC-AGGGACACCAAGTCCTA-GTGG-ACCCTGCCC-ATGGGGCCGCCGACACCCT----GGGCCAGCGGGCTCTTCCATGGAGGATGGAAACGCTCTCGGC--TGAAACTGCACACGGGCAGCAAAGTCAACAGGGCAGCTGCTCTCCCCGCGGGGAGGGAAAG-AGCCACTCTTACTCTCTCTGCAGAGGACATTTGGACGGTCCTCCAGCTGCAGCCATCATCCTTCTCTCTATTCCCGAAACAGGGAGCCCCGCT-GCCTGAAAGAAACA---ACACGTGCTGTGTGGAGT-GCATTGCAGGTGGAA-TCAAATGATACACGCTGGGATTACATGACACTTTTACCTTTTAAGATTGATA-TTCTTTAAACAGAATTTCAGCTACAGAATAGGCAACGAAATATTTGGAGAAACAGCATTAT-AAAGATCCATTTCGTGTCATTAATTTGTGAAATTCCATAGAAATCACCATTTCTGCAAATACTCTGTC i calJac3.chr4 C 0 C 0 s canFam3.chr1 56159800 1227 + 122678785 cttcaccgcctgagctacccaggcgccccTCTTTCTATTTTCGAATTTAATATGCTTACTGAATCTGACATATACCTGTCTTATCCATAGCCACAGACCTCCAGTGTGGCTCA---ACTGTACCTCTGAGGCTGTCTAGGGGCCTCCCCCAGGCAGCCTAGATGCTGT-GTGAT------------------------------GGGGAAGTCACTTCTGAGAGAGAAAAAGAAAGGAAAAGTAATCTGAGCAAAGGAAATACACATGTCATGTGC-TAAACGACCAGGATGCTTCCTAAAAGTCCCAGAG-----GGGGGAAGATTTCAATTTAGAATCTGATGGATCCCAGCTCACCTGTTTTATTACTGAGCAC-ACTGCTGGCCAGATCCATTTGCTGCTGAGCTAGGTCTGTTCTAAATTCAGACTTGGCTAGTAAAAGTTCTACAATAAAAGCGATTCTTTGATGTCCAATCCCAGCACATAAAATCCAAAAATATGCTTTTACTAAGGTGAATGAGTGAGTGGTTTGGGTTAGCATGTGAACAGTTACAAATGTCAGTGGCTTGGAGGGATAGAAACTCAACTGGAAATTTCACTCAAGCCAGGTGTCTGGTTTAAATTTGGAGAAAAGAATATATTAAATACGCTTTATTGAGCTGTCATGCATGAAATTGCAT-CTCACATACCTGGAAACACACTGCATCTTTTTCTCAGAAACTGGTAGGATCCCAGTGGGTTTTTTGGGGAGAGGTGAGGAAAGTTCTTGCCTGGCACCCTGTCGTATGGAG-TCGGGAGCCATGTACAGCCTGAGGGCACTGGGTTCAAGGCTGCAGGCAGCCCAATGTGGCTGTCGACACACTTGCGTGGACCGTGGCCATCATCACTGAG-----------TCAAGGCCACGAAGCC------TGACCACCAAGTCATCAGAATAGCTACTTTTCATGTGTGAACAGAAGGAAGTGAGGTGTTCTTTCCCTGCAGAGGAAA--CAGAGTGGTTTCCCGCCACGGCCGCCACTCCTCTGTCTCCGC-----ACAGGAAACTCCAATGATTTAAAAGAAACGAATGCATGCTTTGTGATGAGGAACTTAATGAAGAAAAGTCCAAAGATGTAT-----GGTT--GTGACAATTTTGCCTTTTGAGATTGATT-AAAAAAAAAAAAAAAAAGAGTTACAGAATGTAAAACAGTACCTGCAAAGCAGCAGTATAAATACAGTCATGTTTGATGT----AACTTAGGGAATTCCATAGAGACCACCTTCTCTACATGTTCTCTCCC i canFam3.chr1 I 1239 I 1683 a score=2165444.000000 s hg38.chr6_KB021644v2_alt 87146 778 + 185823 AATATATGGACACACATGCAAGTAAATGGTTGTGAATTCATT-AATAGAACACTACCCAGCACACTTACTCATCAACtgggctcatttgatctttctaagcttctgtttccatgtctgcaaataggaatgataatagctcttacctcacagcacagtagtgatgattaactaa---------------------------------------------------tatcatctttagaaaacttaacattgtTCTggccgggcagggtggatcacacctgtcatcccagcactttgggaggccgaggcaggtgggtcatttgaggtcaggagtttgagaccagcctggtcaacatggtgaaaccccatctc--tagtaaaaatacaaacattagccgggcgtggtggcgcttgcctgtagtcccaactactagggaggccgagttaggaaaatcacttgaacctgggaggcagaggttgcagtgagctgagattgtgccactgcactccagcctgggtgacagagtgagattttgtctcaaaaaac--------aaacaaacaaaaaCTTTATCATTGTTCTGGTACTGTGTGTGTTGGAAAAATGGCAGAAGGAAGATGGGATTCCAGGGAAGTGTCCTGCAGATGAAGGAGGAGATGCTGATGGTAATTG----------------------------------------------TATGTTGGGAGGGCACAGGGAGAATCCTTCGCATGTGTGTTTGTGTGT--GA-GGAATGTTTCTTGCAAGTGGAAGGTAACTGTTGCCATGTGTTTGTGTGCCGGGTAGTCCTTTTTCTCCTATGTCTCACCCAATGCATCCAATTTGACACTAGAGCAGAAAACAGAT-TCC s panTro4.chr6 170670987 774 + 172623881 AATATATGGACACACATGCAAGCAAATGGTTGTGAATTCATT-AATAGAACACTACCCCGCACACTTACTCATCAACtgggctcatttgatctttctaagcttctgtttccatgtctgcaaataggaatgataatagctcttacctcacagcacagtagtgatgattaactaa---------------------------------------------------tatcatctttataaaacttaacattgtTCTggccgggcagggtggatcacacctgtcatcccagcactttgggaggccgaggcaggtgggtcatttgaggtcaggagtttgagaccagcctggtcaacatggtgaaaccccatctc--tagtaaaaatacaaacattagccgggcgtggtggcgcttgcctgtagtcccaactactagggaggccgagttaggaaaatcacttgaacctgggaggcagaggttgcagtgagctgagattgtgccactgcactccagcctgggtgacagagtgagattttgtctcaaa------------aaacaaacaaaaaCTTTATCATTGTTCTGGTACTGTGTGTGTTGGAAAAATGGCAGAAGGAAGATGGGATTCCAGGGAAGTGTCCTGCAGATGAAGGAGGAGATGCTGATGGTAATTG----------------------------------------------TGTGTTGGGAGGGCACAGGGAGAATCCTTCGCATGTGTGTTTGTGTGT--GA-GGAATGTTTCTTGCAAGTGGAAGGTAACTGTTGCCATGTGTTTGTGTGCCGGGTAGTCCTTTTTCTCCTATTTCTCACCCAGTGCATCCAATTTGACACTAGAGCAGAAAACAGAT-TCC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172419719 776 + 174210431 AATATATGGACACACATGTAAGCAAATGGTTGTGAATTCATT-AATAGAACACTACCCAGCACACTTACTCATCAACtgggctcatttgatctttctaagcttctgtttccatgtctgcaaataggaatgatgatagctcttacctcacagcacagtaatgatgattaactaa---------------------------------------------------tatcatctttataaaacttaacattgtTCTggccgggcagagtggatcacacctgtcatcccagcactttgggaggccgaggcaggtgggtcatttgaagtcaggagtttgagaccagcctggtcaacatggtgaaaccccatctc--tagtaaaaatacaaacattagccgggcgtggtggcgcgtgcctgtagtcccaactactagggaggctgagttaggaaaatcacttgaacctgggaggcagaggtcgcagtgagctgagattgtgctactgcactccagcctgggtgacagagtgagactctgtctcaaa------------aaacaaacaaaaaCCTTATCATTGTTCTGGTACTGTGTGTGTTGGAAAAATGGCAGAAGGAAGATGGGATTCCAGGGAAGTGTCCTGTAGATGAAGGATGAGATGCTGATGGTAATTG----------------------------------------------TGTGTTGGGAGGGCACAGGGAGAATCCTTTGCATGTGTGTTTGTGTGTGAGA-GGAATGTTTCTTGCAAGTGGAAGATAACTGTTGCCATGTGTTTGTGTGCCAGGTAGTCCTTTTTCTCCTGTTTCTCACCCAATGCGTCCAATTTGACACTAGAGCAGAAAACAGAT-TCC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156286168 775 + 157873769 AATATATAGACACACATGCAAGCAAATGGTTGTGAATTCGTT-AACAGAACACTACCCAGCACACTTACTCATCAACtgggctcatttgatctttctaagcttctgtttccatgtctgcaaataggaatgataatagctcttacctcacagcgcagtagtgatgattaactaa---------------------------------------------------tatcatctttataaaaTTTAACATTGTTCTggccaggcagagtggatcacacctgtcatcccagcactttgggaggccaaggcaggtgggtcatttgaggtcaggagtttgagaccagcctggtcaacatggtgaaaccccatctc--cagtaaaaatacaaacattagccaggtgtggtggcgcgtgcctgtagtcccaactactagggaggccgagttaggaaaatcacttgaacctgggaggcagaggttgcagtgagccgagattgtgccactgcactccagcctgggtgacagagtgagactctgtctcaaa------------aaacaaacaaaCACCTTACCGTTGTTCTGGTGCTGTGTGTGTTGGAAAAATGGCAGAAGGAAGATGGGATTCCAGGGAAGTGTCCTACAGATGAAGGATGAGATGCTGATGGTAATTG----------------------------------------------TGTGTTGGGAGGGCATATGGAG-ATCCTTTGCATGTGTGTTTGTGTGTGAGA-GGAATGTTTCTTGCAAGTGGAAGATAACTGTTGCCATGTGTTTGTGTGCCGGGTAGTCCTTTTTCTCCTATTTCTCACCCAATGTGTCCAATTTGACGTTAGAGCAGAAAACAGAC-GCC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168103235 791 + 169853907 AATATATGGACACGCACATGAGCAAGTGGTTGTGCATTTATTCGATAGAACGCTACCCAGCACGCGTACTCCTCAcctgggctcatttgatctttctaagcttctgtttccatgtttgcaaataggaatgataatagctgttacctcacagtatagtagtgatgattaactaa---------------------------------------------------TTTCTTCTTTATAAAACTTAACATTGTTCTggctgggcgcagtggatcacacctgtcatcccagcactttgggaggccaaggcaggtggatcatttgatgtcaggagtttgagaccagcctggtcaacatggtgaaaacccatctctataggaaaaatacaaacattagccgggcgtgggggcgcgtgcctgtagtcccaactactagggaggctgagttaggaaaatcacttgaacctgggaggccggggttgcagtgagctgagatcgtgccactgcactccagcctgagtgacagagtgagagtctgtctGGAAaaacaaacaaataaacaaacaaacaCCTTATCACTGTTCTGGTGCTGCGTGTGTTGGGAAAATGGCAGAAGGAAGATGGGACTCCAGAGAAGCGTCCTACAGATGAAGGATGAAATGCTGATGGTAACTG----------------------------------------------TTTGTTGGGAGAGCACAGGGAGAATCCTTTGCATGTGTGTTTGTGTGTGAGG-GGAATGTTTCTTGCAAGTGGAAGATAACTGTTGCCATGTGTTTGTGTGCCAGGTAATCAATTTTCTCCTATTTCTCACCCAATGCGTCCAATTTGACACTAGAGCAGAAAACAGAT-CCC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169058923 791 - 170955103 AATATATGGACACGCACATGAGCAAGTGGTTGTGCATTTATTCGATAGAACGCTACCCAGCACGCGTACTCATCAACtgggctcatttgatctttctaagcttctgtttccatgtttgcaaataggaatgataatagctgttacctcacagtatagtagtgatgattaactaa---------------------------------------------------TTTCTTCTTTATAAAACTTAACATTGTTCTggctgggcgcagtggatcacacctgtcatcccagcactttgggaggccaaggcaggtggatcatttgatgtcaggagtttgagaccagcctggtcaacatggtgaaaacccatctctataggaaaaatacaaacattagccgggcgtgggggcgcgtgcctgtagtcccaactactagggaggctgagttaggaaaatcacttgaacctgggaggccggggttgcagtgagctgagatcgtgccactgcactccagcctgagtgacagagtgagagtctgtctggaaaaacaaacaaataaacaaacaaaCACCTTATCACTGTTCTGGTGCTGCGTGTGTTGGAAAAATGGCAGAAGGAAGATGGGACTCCAGAGAAGCGTCCTACAGATGAAGGATGAAATGCTGATGGTAATTG----------------------------------------------TTTGTTGGGAGAGCACAGGGAGAATCCTTTGCATGTGTGTTTGTGTGTGAGG-GGAATGTTTCTTGCAAGTGGAAGATAACTGTTGCCATGTGTTTGTGTGCCAGGTAATCAATTTTCTCCTATTTCTCACCCAATGCGTCCAATTTGACACTAGAGCAGAAAACAGAT-CCC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163877184 790 + 165299245 AATATATGGACATGCATATGAGCAAGTGGTTGTGCATTTATTCGATAGAACGCTACCCAGCACACGTACTCATCAACTGGGCTCATTTGATCTTTCTAAGCTTCTGTTTCCATGTTTGCAAATAGGAATGATAATAGCTGTTACCTCACAGTACAGTAGTGACAATTAACTAA---------------------------------------------------TATCCTCTTTATAAAACTTAACAttgttctggccgggcgcagtggatcacacctgtcatcccagcactttgggaggctgaggcgagtggatcatttgaggtcaggagtttcagaacagcctggtcaacatggtaaaaacccatctc--tagtaaaaatacaaacattagccgggtgtcggggcgcgtgcctgtagtcccaactactagggaggctgagttaggaaaatcacttgaacctgggaggccgaggttgcagtgagctgagatcgtgccactgcactccagcctgggcgacagagtgagactctgtctcaaaaaacaaacaaataaacaaacaaacaccttaTCATTGTTCTGGTGCTGTGTgtgttggaaaaatggcagaAGGAAGATGGGACTCCACAGAAGCGTCCTACAGATGAGGGATGAAATGCTGATGGTAATTG----------------------------------------------TTTGTTGGGAGGGCGCAGGGAGAATCctttgcatgtgtgtttgtgtgtgagg-gGAATGTTTCTTGCAAGTGGAAGATAACTGTTGCCATGTGTTTGTGTGCCAGGTAATCAATTTTCTCCTATTTCTCACCCAATGCGTCCAATTTGACACTAGAGCAGAAAACAGAtcccc i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96654644 789 + 98384682 AATATATGGACAGGCATACGAGCAAATGGTTGTGCATTTATTCGATAGAACGCTACCCAGCATACGTACTCATCAAttgggctcatttgatctttctaagcttctgtttccatgtctgaaaataggagtgataatagctcttaccttacagtacagttgtgacgattaactaa---------------------------------------------------tatcctctttataaaacttaacaTTGTTCTggccgggcgcagtggatcacacctgtcatcccagcactttgggaggccaaggcaggtggatcatttgaggtcaggagtttgagaccagcacggtcaacatggtgaaaacccatctc--tagcaaaaatacaaacattagccgggcgtaggggcgcgtgcctgtagtcccaactactagggaggctgagttaggaaaatcacttgaacctgggaggccgaggttgcagtgagctgagatcgtgccactgcactccagcctgggtgacagagtgagactctgtctcgaaaaacaaacaaataaacaaacaaaCACCTTATCACTGTTCTGGTGCTGTGTGTGTTGGAAAAATGGCAGAAGGAAGATGGGATTCCAGAGAAGCGTCCTACAGATGAAGGATGAGATGCTGATGGCAATCG----------------------------------------------TTTGTTGGGAGGGCACAGGGAGAATCCTTTCCATGTGTGTTTGTGTGTGAGG-GGAATGTTTCTTGCAAGTGGAAGATAACTGTTGCCATGTGTTTGTGAGCCAGGTAATCCTTTTTCTCCTATTTCCCACCCAATGCGTCCAATGTGACACTAGAGCAGAAAACAGAT-CAC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169863435 860 + 171630274 ----CGTGGACA--CACGTGGGCAAATGGCTGTGCATTCCTTCAGCAGAACGCTGTCCAGCATGCTCACTCATAAACTGGCTtcatttgatctttctaa-ctcgggtttccatgtctgcagacaggaatgatggtagctcttacctcacaggacagcagcaaggattagctaacataacgctgtaaattacttagAGTAGAGATGAGAAAAATTGAGTTACTGGTATCACCATTATAAAACTTAACATTGTTCTggccaggcacagtggcttaggcctgtaatcccaacactctgggaggcctaggcgagcagatcatttgaggtca-gagtttgagaccagcctggtcaacatggggaaaccctgtctc--tagtgaaaatacaaacgttaagcagacttggtggcatg-acctgttgtcccagctactctgaaggctgaggtaggaaaatcatctgaacccgggaggcagaggttgcagtgagccgagatcatgccaccccactccagcctgggcgacaaagtgagactctgtctcaaaaaaata------aaataaaataaaCCCTTGTCATTGCTCCAGTGCTGTATATGTTGGAAAAATGGCAGAAGGAAGATGGGATTCCAGGAACGTGTCCTACAGGTGAAGGGTGAGATGCTGATGGTGACTGCCTTGGGAGGCCCAGGGAGGGTGAAGGGTGAGATGCTGATGGTGACTGCCTTGGGAG-GCCCAGGGAGAAGGCTTTGCGCGTGTGCCTTTGTGCATGACGGAATGCTTCTTG-----------TGACAGTTGCCCTGTGTTTGTGTGCCATGCAGTCCTTTTTCTCCGATTTCTCCCCAAAGGTCTCCAATTTGACAGTAGAGCAGAAAACAGAT-TCC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56161027 1683 + 122678785 I a score=527.000000 s hg38.chr6_KB021644v2_alt 87924 5 + 185823 Ctttt s panTro4.chr6 170671761 2 + 172623881 C---t i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172420495 5 + 174210431 CTTTT i ponAbe2.chr6 C 0 M 259 s nomLeu3.chr3 156286943 5 + 157873769 CTTTt i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168104026 5 + 169853907 CGCCC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169059714 5 - 170955103 CGCCC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163877974 5 + 165299245 cgccc i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96655433 5 + 98384682 CGCCC i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169864295 0 + 171630274 C e canFam3.chr1 56161027 1683 + 122678785 I a score=338254.000000 s hg38.chr6_KB021644v2_alt 87929 220 + 185823 tttttttt--ttttttttttttttttttgagatgcagtctcgctctgtcgccaggctagagtgcagtggcacaatcttggctcactgcaccctctgcctcctaggttcgagcgattctcctgtctcagcctcctgagtagctgggactataggcgcgcaccaccacgcccagctaatttttgtatttttagtagagacggggtttcaccatgttggccagga s panTro4.chr6 170671763 220 + 172623881 tttttttt--ttttttttttttttttttgagatgcagtctcgctctgtcgccaggctagagtgcagtggcacaatcttggctcactgcagcctctgcctcctaggttcgagcgattctcctgtctcagcctcctgagtagcccggactataggcgcgcaccaccacgcccagctaatttttgtatttttagtagagacggggtttcaccatgttggccagga i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156286948 220 + 157873769 ttgtttgt--ttgtttgtttgtttgtttgagatggagtctcgctctgtcgccaggctggagtgcagtggcacaatcttggctcactgcaatctctgcctcccaggttctagtgattctcctgtcctagcctcctgagtagctgggactacaggcatgcgccaccacacccagctaatttttgtatttttagtagagacggggtttcaccatgttggccagga i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168104031 200 + 169853907 --------------ttttttttttttttgagatggagtctcgctctgtcgtcaggctggagtgcagtggcacaatcatggctcactgcaacctctgcctcctgggttcaaacaattctcctgtctcagcctcctgagtag--------acaggcgcccaccaccacgcccagctgatttttgtatttttggtagagatggggttttaccatgttggccagta i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169059719 202 - 170955103 ------------ttttttttttttttttgagatggagtctcgctctgtcgtcaggctggagtgcagtggcacaatcatggctcactgcaacctctgcctcctgggttcaaacaattctcctgtctcagcctcctgagtag--------acaggcgcccaccaccacgcccagctgatttttgtatttttggtagagatggggttttaccatgttggccagta i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163877979 207 + 165299245 ttt-------ttttttttttttctttttgagatggagtcttgctgtgttgccaggccagagtggagtggcacaatcatggctcactgcaacctctgccccctaggttcaagcaattctcctgtctcagcctcctgagtag--------acaggcgcccaccaccacgcccagctgatttttgtatttttggtagagatgggattttaccatgttggccagta i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96655438 214 + 98384682 tttttgtttgtttgtttgtttgttttttgagatggagtctcgctctgtcatcaggctggagtgcagtggcacaatcatggctcactgcaacctctgcctcctgggttcaaacaattctcctgtctcagcctcctgagtag--------acaggcgcccaccaccacgccgagctgatttttgtatttttggtagaggtggggttttaccatgttggccagta i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169864295 0 + 171630274 C e canFam3.chr1 56161027 1683 + 122678785 I e ponAbe2.chr6 172420500 259 + 174210431 M a score=197821.000000 s hg38.chr6_KB021644v2_alt 88149 94 + 185823 tggtctcaatctcctgacttcaggtgatccacccgcctcggcctcccaaagtgctgggattatagaagtgagccaccacgcccggccAGATTCA s panTro4.chr6 170671983 94 + 172623881 tggtctcaatctcctgacttcaggtgatccacccgcctcggcctcccaaagtgctgggattataggagtgagccaccacgcctggccAGATTCA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172420759 94 + 174210431 tggtctcaatatcctgacctcaggtgatccacccacctcggcctcccaaagtgctgggattataggagtgagccaccatgcccggcCAGATTCA i ponAbe2.chr6 M 259 C 0 s nomLeu3.chr3 156287168 94 + 157873769 tggtctcaatctcctgccctcaggtgatccgcccacctcggcctcccaaagtgctaggattacaggcgtgagccaccatgcctggccAGATTCC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168104231 89 + 169853907 tggtctcgatctcctgacctcaggtgatccacccatctcagcctcccaaagtgctgggattacaagcgtgagccatcac-----AGCAGATTCC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169059921 89 - 170955103 tggtctcgatctcctgacctcaggtgatccacccatctcagcctcccaaagtgctgggattacaagcgtgagccatcac-----AGCAGATTCC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163878186 89 + 165299245 tggtctcgatctcctgacctcaggtgatccacccatttcggcctcccaaagtgctgggattacaggcgtgaaccatcac-----aCCAGATTCC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96655652 89 + 98384682 tggtctcgatctcctgacctcaggtgatccacccatctcggcctcccaaagtgctgggattacaggcgtgagccatcac-----AGCAGATTCT i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169864295 0 + 171630274 C e canFam3.chr1 56161027 1683 + 122678785 I a score=496393.000000 s hg38.chr6_KB021644v2_alt 88243 188 + 185823 CTTTTATGCAG--GTATAGCCATGAAACTTTTAGAGGGCTAGCTAAATGGTAGTTCCCAAAGGAACAACCTCTTTCCGGTTAGTTGCACTTGGATGCCTAAGTGCTTCTAACTCCAGGAATGGCTCAAGCGAGACAAACGCCAGCCCTGGAATCCAGGTGCCCCCTTCCCCTCCAGGAGGTCTGCACCTC s panTro4.chr6 170672077 188 + 172623881 CTTTTATGCAG--GTATAGCCAGGAAACTTTTAGAGGGCTAGCTAAATGGTAGTTCCCAAAGGAACAACCTCTTTCTGGTTAGTTGCACTTGGATGCCTAAGTGCTTCTAACTCCAGGAATGGCTCAAGCGAGACAAACGCCAGCCCTGGAATCCAGGTGCCCCCTTCCCCTCCAGGAGGTCTGTACCTC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172420853 188 + 174210431 CTTTTATGCAG--GTATAGCCAGGAAACTTTCAGAGGGCTAGCTAAGTGGTAGTTCCCAAAGGAGCAACCTCTTTCTGGTTTGTTGCACGTGGATGCCTAAGTGCTTCTAACTCCAGGAATGGCTCAAGTGAGACAAATGCCAGCCCTGGAATCCAGGTGCCCCCTTCCCCTCCAGGGGGTCTGCACCTC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156287262 171 + 157873769 CTTTTATGCAG--GTATAGCCAGGAAGCTTTCGGAGGGCTGGCTAAAC-GTAGTTCCCAAAGGAACAACCTCCTTCTGGCTAGTTGCATGTGGATGCCTAAGTGCTTCTAACTCC----------------AGACAAACGCCAGCCCTGGAATCCAGGTGCCCCCTTCCCGTCCAGGAGGTCTGCACCTC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168104320 188 + 169853907 CTTTTGTGCAG--GTATAGCTAGGAAACTTTCAGAGGGGTTGCTAAATGGTAGTTCCCAAAGGAACAATCTCTTTCTGATAAGTTGCACGTGGATGCATCAGCACTTCTAACTCCAGGTATGGCTCAAGTGAGGCAAATGCCAGCCCTGGAATCCAGGTGCCCCCTTCCCCTCCAGGAGGTCTGCACCTC i rheMac3.chr4 C 0 I 17 s macFas5.chr4 169060010 188 - 170955103 CTTTTGTGCAG--GTATAGCTAGGAAACTTTCAGAGGGGTTGCTAAATGGTAGTTCCCAAAGGAACAATCTCTTTCTGATAAGTTGCACGTGGATGCATCAGCACTTCTAACTCCAGGTATGGCTCAAGTGAGGCAAATGCCAGCCCTGGAATCCAGGTGCCCCCTTCCCCTCCAGGAGGTCTGCACCTC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163878275 188 + 165299245 CTTTTGTGCAG--GTATAGCTAGGAAACTTTCAGAGGGGTTGCTAAATCGTAGTTCCCAAAGGAACAATCTCCTTCTGATAAGTTGCACATGGATGCATCAGCACTTCTAACTCCAGGTATGGCTCAAGTGAAGCAAATGCCAGCCCTGGAATCCAGGTGCCCCCTTCCCCTCCAGGAGGTCTGCACCTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96655741 188 + 98384682 CTTTTATGCAG--GTATAGCTAGAAAACTTTCTGAGGGGTTGCTAACTGGTAGTTCCCAAAGGAACAATCTCCTTCTGATAAGTTGCACGTGGATGCATCAGCACTTCTAACTCCAGGTATGGCTCAAGCGAGGCAAACGCCAGCCCTGGAATCTAGGTGCCCCCTTCCCCTCCAGGAGGTCTGCACCTC i chlSab2.chr13 C 0 I 7 s calJac3.chr4 169864295 180 + 171630274 TTTTTATGCAGGCGTTTTGCCTGGGAATGTTCAGAGG------TAAATGGTGGTTCCCAAAGGAACAGCCTCCTCCTGCTAAGGTGCACGTGGATGCCTAAATGCTTCCGACCCCAGG-ATGGCTCAAGC-AGGCAAATGCCAGCCCTG--ATCCGGCTGCCCCCTTCCCCTCCTGGAGGTCTGCCCCTC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56161027 1683 + 122678785 I a score=46047.000000 s hg38.chr6_KB021644v2_alt 88431 101 + 185823 AGGCTGCCTCTTGGACAGCTAGGAGCAGTGAGAGGGAGGCGTGCACCACACCCAGGCGTGTGGCAGTCCAGA-GGGCTGTCTGTGGCAGCTGCAAAGATGGC s panTro4.chr6 170672265 101 + 172623881 AGGCTGCCTCTTGGACAGCTAGGAGCAGCGAGAGGGAGGTGTACACCACACCCAGGCATGTGGCAGTCCAGA-GGGCTGTCTGTGGCAGCTGCAAAGATGGC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172421041 101 + 174210431 TGGCTGCCTCTTGGACAGCTAGGAGCAGCGAGAGGGAGGCATGCACCACACCCAGGCATGTGGCAGTCCAGA-GGGCTGTCTGTGGCAGCTGCAAAGATGGC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156287433 101 + 157873769 TGGCTGCCTCATGGACAGCTAGGAACAGTGAGAGGGAGGCGTGCACCACCCTCAGGCATGTGGCAGTCCAGA-GGGCTCTCTGTGGCAGCTGCAAAGATGGC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169060198 7 - 170955103 --------------------------------------------------------------------------------------------TAATGAT--- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163878463 7 + 165299245 --------------------------------------------------------------------------------------------TAATGAT--- i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169864475 102 + 171630274 TGGCTGCCATGTGGACAGCTAGGAGCAGTGGCAGGGAGGCGTCCACCACGCCCAGGCACGTGGCCATCCAGATAGTCCCGCCGTGGCAGCTGCAAAGATGAC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56161027 1683 + 122678785 I e chlSab2.chr13 96655929 7 + 98384682 I e rheMac3.chr4 168104508 17 + 169853907 I a score=16427.000000 s hg38.chr6_KB021644v2_alt 88532 9 + 185823 AACCTTACC- s panTro4.chr6 170672366 9 + 172623881 AACCTTACC- i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172421142 9 + 174210431 AGCCTTACC- i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156287534 9 + 157873769 AGCCTTACC- i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169060205 9 - 170955103 AACCTTACG- i macFas5.chr4 C 0 I 1 s papAnu2.chr4 163878470 9 + 165299245 AACCTTACG- i papAnu2.chr4 C 0 I 1 s chlSab2.chr13 96655936 9 + 98384682 AACCTTACC- i chlSab2.chr13 I 7 I 1 s calJac3.chr4 169864577 10 + 171630274 AGCCTTACCC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56161027 1683 + 122678785 I e rheMac3.chr4 168104508 17 + 169853907 I a score=3762254.000000 s hg38.chr6_KB021644v2_alt 88541 1372 + 185823 GAGAGGCACATGTGCCACTTGAGCTCGAAGCTCGGGGGCACTGTGTGCCTGCTTCGGAGCTCCTGAACACTTAGGCTCTGTGACTCTCAACGGGACTCAAGCATTTCTCCTTCGTAGTGGAGTAGCAAACTCGTGTTAAACTAGGCAATGCCTGTTACTAGCTGAAATTTAGTGAAGAAAACCAATTATACACAAGTTTATATATTCCATTAAATATTGCATGAAATAAAATAATGCTTTTTTGGAAGGATAAAATTTCTATATAAATGAAAAACAGTGGGGATACTTGGGATAAAAAGTGGTCAAAGCCCTAAATATCCATCACCCAGTCCAGTTCAGTGCATGCCCTCTAGAATATTCCAGATTATGATTTATGTaaccttttatgtaaacagtaagatagtgtttcaggccttgcaagccatatggtctcaggtttacctactgaattttgtcaacgtaaatc---acaacaaatcatagaattcgtaaataaataagcatagctatgctccaatcaaactttatttttat-----ttttttgagacaaggtctcactctgtctcccaggttggagtgcagtggcctgatcatggctcacagtagcttcaagctcctggtctcaagcaatcctcccacctcagctgggactacaggcatgtgtcaccatacctggctaatattttttattttttgtagagaagttttctcattatctcactatgttggccaggctagtctcaaattcatgggcttaagcaatccttccacctcagcctctcaaagtatttgggattacaagtgtgagctactgtgcccagctaaaactttatttaa----a--------aacaTACAAAAAT-AAAAAAAATCCACAGGCAGCAGCCCATAGCCTTGCTTTGCTTAAACCTTTCCTAGTTAAGAACTTTTTGACTGAGAAGGCTGTAGCTTCAAAATCCAAAAATTTATTCTCAAAATCTAGATGATTGAGTTTGACCATATGTTTTCCTAAAGCAGATGAGTGGATTTAATAAAATAGCAATCAAGTAAATTGGAAACAATGCACAGAAAATGAAAAGACTAAGGAAAAAG-ATACAATCTCATgccaggtgcagtggctcacacctgtaatcccagtactttgggaggccgaggcaggagtaccacttgaggttaggagttcaagaccagcctggccaacatggtgaaaccccatttgtactaaaaaatacaaaaattagccaggcatggtggctgcatacctgtagtcccagctactcaggtggctgaggcaggagaatagcttgaactcgggaggcggaggttgcagtgagccaagattgcaccattgcactccagcctgtgtgacgagagtgaaactc--------------TTTTT--------TTA s panTro4.chr6 170672375 1373 + 172623881 GAGAGGCACACGTGCCACTTGAGCTCAAAGCTTGGGGGCACTGTGTGCCTGCTTCGGAGCTCCTGAAGACTTAGGCTCTGTGACTCTCAATGGGACTCAAGCATTTCTCCTTCGTAGTGGAGGAGCAAACTCGTGTTAAACTAGGCAATGCCTGTTACTAGCTGAAATTTAGTGAAGAAAACCAATTATACACAAGTTTATATATTCCATTAAATATTGCATGAAATAAAATAATGCTTTTTTGGAAGGATAAAATTTCTATATAAATGAAAAACAGTGGGGATACTTGGGATAAAAAGTGGTCAAAGCCCTAAATATCCATCACCCAGTCCAGTTCAGTGCATGCCCTCTAGAATATTCCAGATTATGATTTATGTaaccttttatgtaaacagtaagatagtatttcaggccttgcaagccatatggtctcaggtttacctactgaattttgtcaacgtaaatc---acaacaaatcatagaattcgtaaataaatgagcatagctgtgctccaatcaaactttatttttat-----ttttttgagacaaggtctcactctgtctcccaggttggagtgcagtggcctgatcatggctcacagtagcttcaagctcctggtctcaagcaatcctcccacctcagctgggactacaggcatgtgtcaccatacctggctaatattttttattttttgtagagaagttttctcattatctcactatgttggccaggctagtctcaaattcatgggcttaagcaatccttccacctcagcctctcaaagtatttgggattacaagtgtgagctactgtgcccagctaaaactttatttaa----a--------aacaTACAAAAATAAAAAAAAATCCACAGGCAGCAGCCCATAGCCTTGCTTTGCTTAAACCTTTCCTAGTTAAGAACTTTTTGACTGAGAAGGCTGTAACTTCAAAATCCAAAAATTTATTCTCAAAATCTAGATGACTGAGTTTGACCATATGTTTTCCTAAAGCAGATGAGTGGATTTAATAAAATAGCAATCAAGTAAATTGGAAACAATGCACAGAAAGTGAAAAGACTAAGGAAAAAG-ATACAATCTCATgccaggtgcagtggctcacacctgttatcccagtactttgggaggccgaggcaggagtaccacttgaggttaggagttcaagaccagcctggccaacatggtgaaaccccatttgtactaaaaaatacaaaaattagccaggcatggtggctgcatacctgtagtcccagctactcaggcggctgaggcaggagaatagcttgaactcgggaggcggaggttgcagtgagccaagactgcaccatggcactccagcctgtgtgacgagagtgaaactc--------------TTTTT--------TTA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172421151 1386 + 174210431 AAGAGGCACACGTGCCACTTGAACTCAAAGCTTGGGGGCACTGTGTGCCTGCTTCGGAGCTCCTGAACACTTAGGCTCTGTGACTCTCAACGGGACTCAAGCATTTCTCCTTCGTAGTGGAGTAGCAAACTCGTGTTAAACTAGGCAATTCCTGTTACTAGCTGAAATTTAGTGAAGAAAACCAATTATATGCAAGTTTATATATTCTA-TAAATATTGCATGAAATAAAATAATGCTTTTTTGGAAGGATAAAGTTTCTATATAAATGAAAAACAGTGGTGATACTTGGAATAAAAAGTGGTCAAAGCCCTAAATATCTATCACCCAGTCTAGTTCAGTACATGCCCTTTAGAATATTCCAGATTATGATTTATATaaccttttatgtaaacagtaagatagtatttgaggccttgcaaaccatatggtctcaggtttacctattgaattttgtcagtgtaaatcacaacaacaaatcatagaattcataaataaataagcacagctatgctccaatcaaactttatttttat-----ttttttgagacaaggtctcactctgtctcccaggttagagtgcagtggcctgataatgactcacagtagcttcaagttcctggactcaagcaatcctcccgcctcagctgggactacaggaatgtgccaccatacctggctaatattttttattttttgtagagaaggtatctcactatctcactatgttggccaggctagtctcaaattcatgggcttaagcaatccttccacctcagcctcctaaagtatttgggattgcaagtgtgagctaatgtgcccagctaaaactttatttaa----a--------aacaAACAACAAT--AAAAAAATCCACAGGTAGCAGCCCATAGCCTTGCTTTGCTTAAACATTTCCTAGTTAAGAACTTTTTGACTGAGAAGGCTATAGCTTCAAAATCCAAAAATGTATTCTCAAAATCTAGATGATTGAGTTTGACCATATGTTTTCCTAAAGCAGATGAGTGGATTTAATAAAATAGCAATCAAGTAAATTGGAAACGATGCACAGAAAGTGAAAAGACTGAGGAAAATC-ATACAATCTAATgccaggtgc-gtggctcacacctgtaatcccagtactttgggaggcccaggcaggaggaccacttgaggttaggagttcaacaccagcctggccaacatggtgaaaccccatttgtactaaaaaatgcaaaaattagccaggcatggtggccacatgcctgtagtcccagctactcaggtggctgaggcaggagaatagcttgaactcaggaggcggaggttacagtgagccgagattgcgccattgcactccagcctgtgcgacaagagtgaaactctttttttattatttttttt--------tta i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156287543 1372 + 157873769 GAGAGGCACACGTGCCACTTGAACTCAAAGCTCGGGGGCACTGTGTGCCTGCTTCAGAGCTCCTGAACACTTAGGCTCTGTGACTCTCAACGGGACTCAAGCATTTCTCCTTCGTGGTGGAGTAGCAAACTCGTGTTAAACTAGGCAGTGCCTGTTACTAGCCGAAATTTAGTGAAGAAAACCAACTATACGCAAGTTTATATATTCCGTTAAATATTGCATGAAATAAAATAATGCTTTTTTGGAAGGATAAAGTTTCTACAGAAATGAAAAAC--TGGTGATACTTGGGATAAAAAGTGGTCAAAGCCCTGAATATCTATCACCCAGTCTAGTTCAGTACATGCCCTTTAGAATATTCCAGATTATGATTTATGTaatcttttatgtaaacagtaagatagtatttcaggccttgcaagccatatggtctcaggtttacctactgaattttgtcaccgtaaatc---acaacaaatcatagaattc----ataaataagcacagctatgctccaatcaaactttatttttat-----ttttttgagacaaggtctcactctgtctcccaggttggagtgcagtggcttgatcatggctgacagtagcttcaagctcctggactcaagcaatcctcccgcctcatctgggactataggcatgtgccaccatacctggctaatattttttattttttgtagagaaggtgtctcactatctcactatgttggccaggctagtctcaaattcacgggcttaagcaatccttccacctcagcctcccaaagtatttgggattacaagtgtgagctattgtgcccagctaaaactttatttaa----a--------aacaAACAACAAT--AAAAAAATCCACAGGCAGCAACCCATAGCCTTGCTTTGCTTAAAACTTTCCTAGTTAAGAGCTTGTTGACTGAGAAGGCTGTAGCTTCAAAATTCCAAAATTTATTCTCAAAATCTAGATGGTTGAGTTTGACCATATGTTTTCCTATAGCAGATGAGTGGATTTAATAAAACAGCAGTCAAGTATATTGGAAACGATGCACAGAAAGTCAAAAGACTGAGGAAAAAG-ATACAATCTCATgccaggtgcagtggctcacacctgtaatcccagtactttgggaggccgaggcaggaggaccacttgaggttaggagttcaagaccagcctggccaacatggtgaaaccccatttgtactaaaaaatacaaaaatttgccaggcatggtggccgcatgcctgtagccccagctactcaggcggttgaggcaggagaatagcttgaactagggaggcggaggttgcagcgagccgagattgcgccactgcactccagcctgtgtgacaagagtgaaactcTTTTTTT-------ATTTT--------TTA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168104525 1362 + 169853907 GAGAGGTGCACGTGCCAGTTGAACTCAGAGCTCGGGGGCCCCGTGTGCGTGCTTCGGAGCTACTGAACACTTAGGCTCTGTGACTCTCAATGGGACTCAAGCATTTCTCCTTCGTAGTAGAGTAGCAAACTCATGTTAAACTAGGCAATGCCTGTTACTAGCTGAAATTTAGTGAAGAAAACCAATTATACGCAACTTTATATATTCCATTAAATATTGCATGAAATAAAATAATGCTTTTTTGGAAGGATAAAGTTCCTATATAAATGAAAAACAATGGTGATACTTGGGATTAAAAGTGGTCAAAGCCCTAAATATCCATCACCCAGTCTAGCTCAGTACATGCCCTTTAGAATATTCCAGATTATGATTTATTTACTCTTTTATGTAAACAATAAGATAGTATTTCAGGTCTTGCAAGCcatatggtctcaggtttaactactgaattttgtcaatataaatc---acaacaaatcatagaattcatatataaataagcacagctatgctccaatcaaactttTTAAAAAt-----ttttttgagacaaggtctcactctgtctcccgggttggagtgcagtggcctggtcatggctcacagtagtttcaagtttctggactcaagtaatcctcctgcctcagctgggactacaggcatgtgccaccatgcctggctaatatgtttta-tttttgtagagagggtgtctcaccatctcactgtattggccaggctagtctcaaattcatggactcaagcaatcctcccacctcagcctaccaaagtatttgttattacaagtgtgagctactgtgcccagcTAAAACTTTATTTAA----A--------AACAAACAGTAAT--AACAAAATCCACAGGCAACAGCCCATAGCCTTGCTTTGTTTAAACCTTTCCTAGTTAAGAACTTTTTGACTGAGAAGGCTATAGCTCCAAAATCCAAAAATTTATTCTCAAAATCT-GGTGATTGACTTTGACCATATGTTTTCCTAAAGCagatgagtggatttaataaaatagcaatcaagtaaattgcaaactatgcacagaaagtgaaaagactgaggaaaaag-atacaatctcgcaccaggtgcggtggctcacacccgtaatcccagcactttgggaggct------ggaggagcacttgaggttaggagttcaagaccagcctggccaacatggtgaaaccccatttctcctaaaaaa-atgcaaattagccaggcatcgtggccacatgcctgtagtcccagctactcaggaggctgaggcaggagaatagcttgaacccaggaggcagaggttgcagtgagccgagattgcaccattgcactccagcctgtgcaacaaaagtgaagccc--------------tgtctaaa-------- i rheMac3.chr4 I 17 I 9 s macFas5.chr4 169060215 1360 - 170955103 GAGAGGTGCACGTGCCAGTTGAACTCAGAGCTCGGGGGCCCCGTGTGCGTGCTTCGGAGCTACTGAACACTTAGGCTCTGTGACTCTCAATGGGACTCAAGCATTTCTCCTTCATAGTAGAGTAGCAAACTCATGTTAAACTAGGCAATGCCTGTTACTAGCTGAAATTTAGTGAAGAAAACCAATTATACGCAACTTTATATATTCCATTAAATATTGCATGAAATAAAATAATGCTTTTTTGGAAGGATAAAGTTCCTATATAAATGAAAAACAATGGTGATACTTGGGATTAAAAGTGGTCAAAGCCCTAAATATCCATCACCCAGTCTAGCTCAGTACATGCCCTTTAGAATATTCCAGATTATGATTTATTTACTCTTTTATGTAAACAATAAGATAGTATTTCAGGTCTTGCAAGCCATATGGTCTCAGGTTTAACTACTGAATTTTGTCAATATAAATC---ACAACAAATCATAGAATTCATATATAAATAAGCACAGCTATGCTCCAATCAAACTTTTTAAAAAt-----ttttttgagacaaggtctcattctgtctcccgggttggagtgcagtggcctggtcatggctcacagtagtttcaagttcctggactcaagtaatcctcctgcctcagctgggactacaggcatgtgccaccatgcctggctaatatgtttta-tttttgtagagagggtgtctcaccatctcactgtattggccaggctagtctcaaattcatggactcaagcaatcctaccacctcagcctaccaaagtatttggtattacaagtgtgagctactgtgcccagcTAAAACTTTATTTAA----A--------AACAAACAGTAAT--AACAAAATTCACAGGCAACAGCCCATAGCCTTGCTTTGTTTAAACCTTTCCTAGTTAAGAACTTTTTGACTGAGAAGGCTATAGCTCCAAAATCCAAAAATTTATTCTCAAAATCT-GGCGATTGACTTTGACCATATGTTTTCCTAAAGCAGATGagtggatttaataaaatagcaatcaagtaaattgcaaactatgcacagaaagtgaaaagactgaggaaaaag-atacaatctcgcaccaggtgcggtggctcacacccgtaatcccagcactttgggaggct------ggaggaccacttgaggttaggagttcaagaccagcctggccaacatggtgaaaccccatttctactaaaaaatatacaaattagccaggcatcgtggccacatgcctgtagtcccagctactcaggaggctgaggcaggagaatagcttgaacccaggaggcagaggttgcagtgagccgagattgcaccattgcactccagcctgtgcaacaagagtgaagctc--------------tgtct----------- i macFas5.chr4 I 1 I 2 s papAnu2.chr4 163878480 1363 + 165299245 GAGAGGTGCACGTGCCAGTTGAACTCAGAGCTCGGGGGCCCCGTGTGCGTGCTTCGGAGCTACTGAACACTTAGGCTCTGTGACTCTCAATGGGactcaagcatttctccttcGTAGTAGAGTAGCAAACTCATGTTAAACTAGGCAATGCCTGTTACTAGCTGAAATTTAGTGAAGAAAACCAATTATACACAACTTTATATATTCCATTAAatattgcataaaataaaataatcctttttCGGAAGGATAAAGTTCCtatgtaaatgaaaaacaatggTGATACTTGGGATTAAAAGTGGTCAAAGCCCTAAATATCCATCACCCAGTCTAGTTCAGTACATGCCCTTTAGAATATTCCAGATTAtgatttatttactcttttatgTAAACAATAAGATAGTATTTCA-CTCTTGCAAGCCATATGGTCTCAGGTTTAACTACTGAATTTTGTCAATATAAATC---ACAACAAatcatataattcatatataaataagCACAGCTATGCTCCaatcaaactttttttaaat-----ttttttgagacaaggtctcactctgtctcctggattggagtgcagtggcctggtcATGGCTCACAGTAGTTTCAagttcctggactcaagtaatcctcctgcatcagctgggactacaggcatgcgccaccgtgcctggctaatatgtttta-tttttgtagagagggtgtCTCACCACCTCACCgtattgaccaggctagtctcaaattcatgggctcaagcaatcctaccccctcagcctctcaaagtatttggtattacaagtgtgagctactgtgcccagctaaaactttatttaaaaaca--------aacaaacagcaat--aacaaaatcCACAGGCAACAGCCCATAGCCTTGCTTTGTTTAAACCTTTCCTAGTTAAGAACTTTTTGACTGAGAAGGCTATAGCTTCAAAATCCAAAAATTTATTCTCAAAATCT-GGTGATTGAGTTTGACCATATGTTTTCCTAAAGCAGATGAGTGGATTTAATAAAATAGCAATCAAGTAAATTGCAAATGATGCACAGAAAGTGGAAAGACTGAGGAAAaag-atacaatctcacaccaggtgcggtggctcacacctgtaatcccagcactttgggaggct------ggaggaccactggaggttaggagttcaagaccagcctggccaacatggtgaaaccccatttctactaaaaaatatacaagttAGCCAGGCTTCGTGgccgcatgcctgtagtcccagctactcaggaggctgaggcaggagaatatcttgaacccaggaggcagaggttgcagtgagctgagattgcaccattgcactccagcctgtgcaacaagagtgaagctc--------------tgtct----------- i papAnu2.chr4 I 1 I 25 s chlSab2.chr13 96655946 1361 + 98384682 GAGAGGTGCACGTGCCACTTGAACTTGAAGCTCGGGGGCCCCGTGTGCGTGCTTCGGAGCTACTGAACACTTAGGCTCTGTGACTCTCAATGGGACTCAAGCATTT---CTTCGTAGTAGAGTAGCAAACTCATGTTAAACTAGGCAATGCCTGTTACTAGCTGAAATTTAGTGAAGAAAACCAATTATACGCAACTTTATATATTCCATTAAATATTGCATGAAATAACATAATGCTTTTTTGGAAGGATAAAGTTTCTATGTCAATGAAAAACAATGGTGATACTTGGGATTAAAAGTGGTCAAAGCCCTAAATATCCATCACCCAGTCTAGTTCAGTATATGCCCTTTAGAATATTCCAGATTATGATTTATTTACTCttttatgtaaacaataagatagtatttcaggccttgtaagccgtatggtc-caggtataactactgaattttgtcaatataaatc---acaacaaatcattgaattcataagtaaataagcacagctatgctccaatcaaactttctttttat-----ttttttgagacaaggtctcactctgtctcccaggttggagtgcagtggcctggtcatggctcacagtagcttcaagctcctggactcaagtaatcctcctgcctcagctgggactacaggcatgtgccaccgtgcctggctaatatgtttta-tttttgtagagagggtgtctcaccatctcactctattggccaggctagtctcaaattcatgggctcaagcaatcctaccacctcagcctcccaaagtatttggtattacaagtgtgagctactgtgccaagctaaaactttatttaa----a--------aacaaacagTAAT--AACAAAATCCACAGGCAACAGCCCATAGCCTTGCTTTGCTTAAACCTTTCCTAGTTAACAACTTTTTGACTGAGAAGGCTATAGCTCCAAAATCCAAAAATTTATTCTCAAAATCT-GGTGATTGAGTTTGACCATATGTTTTCCTAAAGCAGatgagtggatttaataaaatagcaatcaagtaaattgcaaacgatgcacagaaggtggaaagactgaggaaaaag-atacagtctcacaccaggtgcggcggctcacacctgtaatcccagcactttgggaggct------ggaggaccacttgaggttaggagttcaagaccagcctggccaacatggtgaaaccccatttctactaaaaaatatacaaattagccaggcttcgtggccgcatgcctgtagttccagctactcaggaggctgaggcaggagaatatcttgaacccaggaggcagaggttgcagtgagccaagattgcaccattgcactccagcctgtgcaacaagagtgaagctc--------------tgtct---caaaa--- i chlSab2.chr13 I 1 C 0 s calJac3.chr4 169864587 1297 + 171630274 AAGAGGCGCACGTGCCGCTGGAACTCAGAGCTCGGG----------------------GCTCCTGAACGCTCA----CCGCGACTCTTGAGGGGACGCAAGCATTTCTCTCTCTTACTGGAGCAGCAAACTTGTGTTAAACCA-GCAATGCCTGTTAGTAGCTGAAATTT-GTGAAGAAAACAAATTATATGCGAGTATATATAGTCCATCAAATGTTGCAT-AAATGAAATAATGCTTTTTTGGAAGGATAAAGTCTCTATGTAAATGAAAA----TGGTGACACTTGGGATAAACAGTGATCAAA-------------------------------------TCCCTTTAGAATATTCCAGATTACGGTTTATATGaccttttatgtaaacagtaagatagcatttcaggccttgcaagccatatggtctcaggtttagctactgaattttttcaacacaaatc---gcagcaaatcacagaaaacataaataaataaacgcagctgtactccaaccaaacttCGCttttatttttattttttgagacaaggtctcactgtgtctctcaggttggagtgcagtggcctgatcatggctcagagtagcctcaagctcctgggcccaagtcatcctcctcccccagctgggcctacaggcatgtgccaccatgcctggccaacatggtttctatttggtagagagggtgtctcactatctcactatgttggccaggctagtgtcaaattcttgggctcaagcaatccttccacctcagcctcccaaagc-cttgggattacaagtgccaggtgctgcgtgcggcTACAACTTTATTTAA----AAAGAAGCCAACAAACAACAGT--AAGAAACCCC---GGCAGCAGCCCATGGCCTTGCTCCACTTATGCCTTTCCTAGTTAAGAACTTCTTCACTGAGAAGGCTTTAGCTTCAAAA-CATAGTATTGATTCTCAAAGTCTGGATGATTGACTCTGACC--ATGTTTTCCTaaagcagatgagtgaatttaataaaacagcaattgagtaaattgcaaatgacacacagagagtgaaaagactgaagaacacgaagacaatctcaggccaggtgtggcggctcacgcctgtaatcccggtggtttgagacgccgaggtgggtggatcacctgaggtcaggagttcaagaccagcctggtcaacatggcaaaaccctgtttctact-gaaaatacaaaaattagccgggtgtggtgg-tacctgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagctgagatcacaccacggcactccagcttggggaac-agagggagactc------------------------------ i calJac3.chr4 C 0 C 0 e canFam3.chr1 56161027 1683 + 122678785 I a score=3483.000000 s hg38.chr6_KB021644v2_alt 89913 12 + 185823 TTTTTGAGACGA- s panTro4.chr6 170673748 12 + 172623881 TTTTTGAGacga- i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172422537 12 + 174210431 tttttGAGacaa- i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156288915 12 + 157873769 TTTTTGAGacaa- i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168105896 6 + 169853907 ------aaaaaa- i rheMac3.chr4 I 9 I 6 s macFas5.chr4 169061577 6 - 170955103 ------aaaaaa- i macFas5.chr4 I 2 I 6 s chlSab2.chr13 96657307 7 + 98384682 -----aaaaaaa- i chlSab2.chr13 C 0 I 5 s calJac3.chr4 169865884 10 + 171630274 ---tccaaaagac i calJac3.chr4 C 0 C 0 e canFam3.chr1 56161027 1683 + 122678785 I e papAnu2.chr4 163879843 25 + 165299245 I a score=1076620.000000 s hg38.chr6_KB021644v2_alt 89925 379 + 185823 agtctcagtaacctgtggaacaacaccaaggtgtcacataattatacctgggatcccagaaggagtaaaggaaatgagagaacaacatttgaacaaataggggccaaaacatttctaaatttgatgaaaactctaagtgaatagatctaggaagctcaagtaatctcaagtaaaaaagcatacacatacacacagacacacaataaatacttacaaggcctaccacaatcaaattgctgaaaacgggtggtaaagaaaacattttaaaagtagctggagagaaaagacccattccatgctgaggtgcaaaggtgagaatgacgactgtgggcttcatgacagatactatggaagtcagaagacagggaaATGGCAGGCA s panTro4.chr6 170673760 379 + 172623881 agtctcagtaacctgtggaacaacaccaaggtgtcacataattatacctgggatcccagaaggagtaaaggaaatgagagaagaacatttgaacaaacagggaccaaaacatttctaaatttgatgaaaactctacgtgaatagatctaggaagctcaaataatctcaagtaaaaaagcatacacatacacacagacacacaataaatacttacaaggcctaccacaatcaaattgctgaaaacgggtggtaaagaaaacattttaaaagtagctggagagaaaagacccattccatgctgaggtgcaaaggtgagaatgacgactgtgggcttcatgacagatactatggaagtcagaagacagggaaatggcaggca i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172422549 379 + 174210431 agtctcaataacccatggaacaacaccaacgtgtcacataattatacctgggatcccagaaggagtaaaggaaatgagagaagaacatgtgaacaaataggggccaaaacatttctaaatttgatgaaaactctaagtgaatagatctaggaagctcaaataatctcaagtaaaaaagcatacacatacacacagacacacaataaatacttacaaggcctaccacaatcaaattgctgaaaaccagtggtaaagaaaacattttaaaagtagctggagagaaaagacccattccatgctgaggtgcaaaggtgagaatgacgactgtgggctttgtgacagatactatggaagtcagaagacagggaaatggcaggca i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156288927 379 + 157873769 agtctcagtaatctgtggaacaccaccaaggtgtcacataattatacctgggatcccagaaggagtaaaggaaatgagagaagaacatttgaacaaataggggccaaaacatttctaaatttgatgaaaactctaagtgaatagatctaggaagctcaaataatctcaagtaacaaagcatacacatacacacagacacacaataaatacttacaaggcctaccacaatcaaattgctgaaaaacagtggtaaagaaaacattttaaaagtagctggagagaaaagacccattccatgctgaggtgcaaagatgagaaagatgactgtgggcttcgtgatagatactacggaagtcagaagacagggaaatggcaggca i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168105908 378 + 169853907 agtctcagtaacctatggaacaacagcaaggtgtcacataattgtacctggaatcccagaaggagtaaaggaaatgagagaagaacatttgaacaaataggggctgacacatttctaaatttgatgaaaactctaagtgtatagatctgggaagttcaaataatctcaagtaaaaaagtctacacatacacacagacacataataaatacttacaaggcctaccacaatc-aattgctgaaaaccagtggtaaagaaaacattttaaaagtagctggagagaaaagacccattccatgctgaggtgcaaaggtgaggatgacagctgtgggcttcatgacagatactacggaagtcggaagacagggaaacggcaggca i rheMac3.chr4 I 6 I 102 s macFas5.chr4 169061589 378 - 170955103 agtctcagtaacctatggaacaacagcaaagtgtcacataattgtacctggaatcccagaaggagtaaaggaaatgagagaagaacatttgaacaaataggggctgacacatttctaaatttgatgaaaactctaagtgtatagatctgggaagttcaaataatctcaagtaaaaaagtctacacatacacacagacacataataaatacttacaaggcctaccacaatc-aattgctgaaaaccagtggtaaagaaaacattttaaaagtagctggagagaaaagacccattccatgctgaggtgcaaaggtgaggatgacagctgtgggcttcatgacagatactacggaagtcggaagacggggaaacggcaggca i macFas5.chr4 I 6 I 1 s papAnu2.chr4 163879868 357 + 165299245 agtctcagTAACCTATGGAACAGCAGCAAGGTGTCACATAATTGTACCTGGAATCCCAGAAGGAgtaaaggaaatgagagaagaaCATTTGAACAAATAGGGGCTGAGACATTTCTAA----------------------ATAGATCTGGGAAGTTCAAATAATCTCAAGTAAAAAagtctacacatacacacagacacataatAAATACTTACAAGGCCTACCACaatcaaattgctgaaaaccagtggtaaagaaaacattttaaaagtagctGGAGAGAAAAGACCTATTCTATGCTGAGGTGCAAAGGTGAGAATGACAGCTGTGGGCTTCATGACAGATACTACGGAAGTCAGAAGACAGGGAAACAGCAGGCA i papAnu2.chr4 I 25 I 1 s chlSab2.chr13 96657319 379 + 98384682 agtctcagtaacctatagaacaacagcaaggtgtcacataattgtacctggaatcccagaaggagtaaaggaaatgagagaagaacatttgaacaaataggggccgagacatttctaaatttgatgaaaactctaagtgtatagatctgggaagttcaaataatctcaagtcaaaaagtgtacacatacacacagacacataataaatacttacaaggcctaccacaatcaaattgctgaaaaccagtggtaaagaacacattttaaaagtagctggagtgaaaagacccattccatgctgatgtgcaaaggtgaggatgatggctgtgggctccatgacagatgctacggaagtcagaagacagggaaacggcaggca i chlSab2.chr13 I 5 I 102 s calJac3.chr4 169865894 372 + 171630274 agtcttgggaacaagctgaa---cacctatgtgtcacgtaatcatacttgggaccctgggaggagtaaaggaaataggaggaaaacatttgagaagataggtgccaagacttttctgaatttgatgaaaa--ctaagtgaatagatctaggaagctcaaataatctcaagtaaagaagcatacacatacacacagacacacaatgaatacttaaaaggcctgccacaaccaaattgctgaaaaccagtggtaaagagaacattttaaaagcagctggagagaaaagacccatcagacactgaggtgc-gtggtgaggacggcggctgccggcttcacgacagacac-agggaagccaggagacagggaactgacatgca i calJac3.chr4 C 0 C 0 e canFam3.chr1 56161027 1683 + 122678785 I a score=-1240.000000 s hg38.chr6_KB021644v2_alt 90304 1 + 185823 -G s panTro4.chr6 170674139 1 + 172623881 -g i panTro4.chr6 C 0 I 96 s ponAbe2.chr6 172422928 1 + 174210431 -g i ponAbe2.chr6 C 0 I 96 s nomLeu3.chr3 156289306 1 + 157873769 -g i nomLeu3.chr3 C 0 I 96 s calJac3.chr4 169866266 1 + 171630274 c- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56161027 1683 + 122678785 I e chlSab2.chr13 96657698 102 + 98384682 I e papAnu2.chr4 163880225 1 + 165299245 I e rheMac3.chr4 168106286 102 + 169853907 I e macFas5.chr4 169061967 1 - 170955103 I a score=9752.000000 s hg38.chr6_KB021644v2_alt 90305 3 + 185823 GCC s panTro4.chr6 170674236 3 + 172623881 gcc i panTro4.chr6 I 96 C 0 s ponAbe2.chr6 172423025 3 + 174210431 GCC i ponAbe2.chr6 I 96 C 0 s nomLeu3.chr3 156289403 3 + 157873769 gcc i nomLeu3.chr3 I 96 C 0 s rheMac3.chr4 168106388 3 + 169853907 gcc i rheMac3.chr4 I 102 C 0 s macFas5.chr4 169061968 3 - 170955103 gcc i macFas5.chr4 I 1 I 101 s papAnu2.chr4 163880226 3 + 165299245 GCC i papAnu2.chr4 I 1 I 101 s chlSab2.chr13 96657800 3 + 98384682 gcc i chlSab2.chr13 I 102 C 0 s calJac3.chr4 169866267 3 + 171630274 gct i calJac3.chr4 C 0 I 78 e canFam3.chr1 56161027 1683 + 122678785 I a score=28004.000000 s hg38.chr6_KB021644v2_alt 90308 11 + 185823 --------------------------ACAACACACCC s panTro4.chr6 170674239 11 + 172623881 --------------------------acaacacaccc i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172423028 11 + 174210431 --------------------------ACAACACACCC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156289406 11 + 157873769 --------------------------acaacacaccc i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168106391 11 + 169853907 --------------------------acaacacaccc i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169062072 11 - 170955103 --------------------------acaacacaccc i macFas5.chr4 I 101 C 0 s papAnu2.chr4 163880330 11 + 165299245 --------------------------ACAACATACCC i papAnu2.chr4 I 101 C 0 s chlSab2.chr13 96657803 11 + 98384682 --------------------------acaacacaccc i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169866348 37 + 171630274 acaacagccaatcactacgagatgccacagcacacac i calJac3.chr4 I 78 C 0 e canFam3.chr1 56161027 1683 + 122678785 I a score=91853.000000 s hg38.chr6_KB021644v2_alt 90319 43 + 185823 AACAGAATGGCTGTCGTCCCAAAGTCTGAG------GTTACCAGGCGTT s panTro4.chr6 170674250 43 + 172623881 aacagaatggccgtcatcccaaagtctgag------tttgccaggtgtt i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172423039 43 + 174210431 AACAGAATGGCTGTTGTCTCAAAGTCTGAG------GTTACCAGGCCTT i ponAbe2.chr6 C 0 I 2 s rheMac3.chr4 168106402 49 + 169853907 aacagaatggctGTCATCTCGAAGTCTGAGGTTAACGTTACCAGGCATT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169062083 43 - 170955103 aacagaatggctgtcatctcgaagtctgag------gttaccaggtgtt i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163880341 43 + 165299245 AACAGAATGGCTGTCATCTCAAAGTCTGAG------GTTACCAGGCACT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96657814 43 + 98384682 aacagaatggctgtcgtctcaaagtctgag------gttaccaggtgtt i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169866385 43 + 171630274 agcagaatggctgtcatctcaaagtctggg------gttaccagccgtc i calJac3.chr4 C 0 C 0 e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C a score=22121.000000 s hg38.chr6_KB021644v2_alt 90362 14 + 185823 GAGGAAGAGACTGA s panTro4.chr6 170674293 14 + 172623881 gaagaagaGACCGA i panTro4.chr6 C 0 C 0 s rheMac3.chr4 168106451 14 + 169853907 GAAGAAGAGACGGG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169062126 14 - 170955103 gaagaagaGACCAG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163880384 14 + 165299245 GAAGAAGAGACCGA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96657857 14 + 98384682 gaagaagaGACGGG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169866428 14 + 171630274 gaagaagagactga i calJac3.chr4 C 0 C 0 e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C e ponAbe2.chr6 172423082 2 + 174210431 I a score=15127.000000 s hg38.chr6_KB021644v2_alt 90376 6 + 185823 TGCCTT s panTro4.chr6 170674307 6 + 172623881 TGCCTT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172423084 6 + 174210431 TGCCTT i ponAbe2.chr6 I 2 C 0 s rheMac3.chr4 168106465 6 + 169853907 TGCTTT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169062140 6 - 170955103 TGCCTT i macFas5.chr4 C 0 T 66 s papAnu2.chr4 163880398 6 + 165299245 TGCCTT i papAnu2.chr4 C 0 T 66 s chlSab2.chr13 96657871 6 + 98384682 TGCCTT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169866442 6 + 171630274 tgcctt i calJac3.chr4 C 0 C 0 e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C a score=6390.000000 s hg38.chr6_KB021644v2_alt 90382 4 + 185823 CCTA s panTro4.chr6 170674313 4 + 172623881 CCTA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172423090 4 + 174210431 CCTA i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168106471 4 + 169853907 CCCA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169062080 4 - 170955103 ccca i macFas5.chr4 T 66 C 0 s papAnu2.chr4 163880338 4 + 165299245 CCCA i papAnu2.chr4 T 66 C 0 s chlSab2.chr13 96657877 3 + 98384682 -CCT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169866448 4 + 171630274 ccta i calJac3.chr4 C 0 I 629 e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C a score=64704.000000 s hg38.chr6_KB021644v2_alt 90386 40 + 185823 ACAGAATGGCTGTCGTCTCAAAGTCTGAGGTTACCAGGCG s panTro4.chr6 170674317 40 + 172623881 ACAGAATGGCTGTCGTCTCAAAGTCTGAGGTTACCAGGCG i panTro4.chr6 C 0 T 107 s ponAbe2.chr6 172423094 40 + 174210431 ACAGAATGGCTGTCGTCCCAAAGTCTGACATTACCAGGCA i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168106475 40 + 169853907 ACAGAATGGCTGGCATCTCCAAGTCTGAGGGTACCCGGGG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169062084 40 - 170955103 acagaatggctgtcatctcgaagtctgaggttaccaggtg i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163880342 40 + 165299245 ACAGAATGGCTGTCATCTCAAAGTCTGAGGTTACCAGGCA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96657880 40 + 98384682 ACAGAATGGCTGTCGTCTCGAAGTCTGAGGTAGCCAGGCG i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169866452 629 + 171630274 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C a score=18045.000000 s hg38.chr6_KB021644v2_alt 90426 14 + 185823 TTGAAGAAGAGACC s ponAbe2.chr6 172423134 14 + 174210431 TTGAAGAAGAGACC i ponAbe2.chr6 C 0 T 66 s rheMac3.chr4 168106515 14 + 169853907 TTGGAGAAGAGACC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169062124 14 - 170955103 ttgaagaagaGACC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163880382 14 + 165299245 CTGAAGAAGAGACC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96657920 14 + 98384682 TTGAAGAAGAGACT i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169866452 629 + 171630274 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C e panTro4.chr6 170674357 107 + 172623881 T a score=14248.000000 s hg38.chr6_KB021644v2_alt 90440 11 + 185823 GATGCCTTCCT s ponAbe2.chr6 172423082 11 + 174210431 GGTGCCTTCCT i ponAbe2.chr6 T 66 C 0 s rheMac3.chr4 168106529 11 + 169853907 GGTGCCTTCCT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169062138 11 - 170955103 AGTGCCTTCCT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163880396 11 + 165299245 GATGCCTTCCT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96657934 11 + 98384682 GGTGCCTTCCT i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169866452 629 + 171630274 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C e panTro4.chr6 170674357 107 + 172623881 T a score=1911.000000 s hg38.chr6_KB021644v2_alt 90451 1 + 185823 A s panTro4.chr6 170674250 1 + 172623881 a i panTro4.chr6 T 107 C 0 s ponAbe2.chr6 172423093 1 + 174210431 A i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168106540 1 + 169853907 A i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169062149 1 - 170955103 A i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163880407 1 + 165299245 A i papAnu2.chr4 C 0 I 64 s chlSab2.chr13 96657945 1 + 98384682 A i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169866452 629 + 171630274 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C a score=39976.000000 s hg38.chr6_KB021644v2_alt 90452 33 + 185823 AC-AGAATGGCTGTCGTCCCAAAGTCTGAGGTTA s panTro4.chr6 170674251 33 + 172623881 ac-agaatggccgtcatcccaaagtctgagtttg i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172423094 33 + 174210431 AC-AGAATGGCTGTCGTCCCAAAGTCTGACATTA i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168106541 33 + 169853907 -AGAGAATGGCTGGGGTCCCCAAAACTGAGGGTA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169062150 32 - 170955103 -C-AGAATGGCTGTCGTCTCAAAGACTGAGGTTA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163880472 33 + 165299245 AC-AGAATGGCTGTCATCTCGAAGTCTGAGGTAG i papAnu2.chr4 I 64 C 0 s chlSab2.chr13 96657946 33 + 98384682 AG-AGAATGGCTGTTGTCTCAACGTCTGAGGTTA i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169866452 629 + 171630274 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C a score=39167.000000 s hg38.chr6_KB021644v2_alt 90485 32 + 185823 CCAGGCGTTGAGGAAGAGACCGATGCCTTCCT s panTro4.chr6 170674284 32 + 172623881 ccaggtgttgaagaagaGACCGATGCCTTCCT i panTro4.chr6 C 0 T 66 s ponAbe2.chr6 172423127 32 + 174210431 CCAGGCATTGAAGAAGAGACCGATGCCTTCCT i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168106574 32 + 169853907 ACAAGTGTTGAAGAAGAGACCGATGGCTTCCT i rheMac3.chr4 C 0 I 130 s macFas5.chr4 169062182 32 - 170955103 CCAGGTGTTGAAGAAGAGACCGGTGCCTTCCT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163880505 32 + 165299245 CCAGGCGTTGAAGAAGAGACTGGTGCCTTCCT i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169866452 629 + 171630274 I e canFam3.chr1 56161027 1683 + 122678785 I e chlSab2.chr13 96657979 0 + 98384682 C e nomLeu3.chr3 156289417 0 + 157873769 C a score=65728.000000 s hg38.chr6_KB021644v2_alt 90517 63 + 185823 AACAGAATGGCTGTCGTCCCAAAGTCTG------AGTTTACCAGGCGTTGAGGAAGAGACCGATGCCTT s panTro4.chr6 170674250 63 + 172623881 aacagaatggccgtcatcccaaagtctg------agtttgccaggtgttgaagaagaGACCGATGCCTT i panTro4.chr6 T 66 C 0 s ponAbe2.chr6 172423159 63 + 174210431 AACAGAATGGCTGTCGTCCCAAAGTCTG------AGGTTGCCAGGCGTTGAAGAAGAGACCGATGCCTT i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168106736 63 + 169853907 AAGAGAATGGCTGTCGTCTCAAAAACTG------AGGTTACCAGGGGTTGGAGAAGAGACCGGTGCCTT i rheMac3.chr4 I 130 C 0 s macFas5.chr4 169062214 69 - 170955103 AAGAGAATGGCTGTCGTCTCGAAGTCTGAGGTTAAGGTTACCAGGCATTGAAGAAGAGACGGGTGCTTT i macFas5.chr4 C 0 T 203 s papAnu2.chr4 163880537 61 + 165299245 AAGAGAATGGCTGTCGTCTCAACGTCTG------AGGTTA--AGGCATTGAAGAAGAGACGGGTGCTTT i papAnu2.chr4 C 0 T 260 e calJac3.chr4 169866452 629 + 171630274 I e canFam3.chr1 56161027 1683 + 122678785 I e chlSab2.chr13 96657979 0 + 98384682 C e nomLeu3.chr3 156289417 0 + 157873769 C a score=4763.000000 s hg38.chr6_KB021644v2_alt 90580 4 + 185823 CCTA s panTro4.chr6 170674313 4 + 172623881 CCTA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172423222 4 + 174210431 CCTA i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168106799 4 + 169853907 CCTA i rheMac3.chr4 C 0 T 197 s macFas5.chr4 169062080 4 - 170955103 ccca i macFas5.chr4 T 203 C 0 s papAnu2.chr4 163880338 4 + 165299245 CCCA i papAnu2.chr4 T 260 C 0 e calJac3.chr4 169866452 629 + 171630274 I e canFam3.chr1 56161027 1683 + 122678785 I e chlSab2.chr13 96657979 0 + 98384682 C e nomLeu3.chr3 156289417 0 + 157873769 C a score=35017.000000 s hg38.chr6_KB021644v2_alt 90584 27 + 185823 ACAGAATGGCTGTCGTCCCAAAGTCTG s panTro4.chr6 170674317 27 + 172623881 ACAGAATGGCTGTCGTCTCAAAGTCTG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172423226 27 + 174210431 ACAGAATGGCTGTCATCTCAAAGTCTG i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168106606 27 + 169853907 ACAGAATGGCTGTCATCGCGAAGTCTG i rheMac3.chr4 T 197 C 0 s macFas5.chr4 169062084 27 - 170955103 acagaatggctgtcatctcgaagtctg i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163880342 27 + 165299245 ACAGAATGGCTGTCATCTCAAAGTCTG i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169866452 629 + 171630274 I e canFam3.chr1 56161027 1683 + 122678785 I e chlSab2.chr13 96657979 0 + 98384682 C e nomLeu3.chr3 156289417 0 + 157873769 C a score=53064.000000 s hg38.chr6_KB021644v2_alt 90611 35 + 185823 AGGTTACCAGGCGTTGAGGAAGAGACCGATGCCTT s panTro4.chr6 170674344 35 + 172623881 AGGTTACCAGGCGTTGAAGAAGAGACCGATGCCTT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172423253 32 + 174210431 AGGTTGCCAGGCATT---GAAGAGACTGATGCCTC i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168106633 35 + 169853907 AGGTTACCAGATGTTGAAGAAGAGACCGATGGCTT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169062111 35 - 170955103 aggttaccaggtgttgaagaagaGACCAGTGCCTT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163880369 35 + 165299245 AGGTTACCAGGCACTGAAGAAGAGACCGATGCCTT i papAnu2.chr4 C 0 T 66 s chlSab2.chr13 96657979 35 + 98384682 AGGTTACCAGGCATTGAAGAAGAGACAGGTGCTTT i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169866452 629 + 171630274 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C a score=48467.000000 s hg38.chr6_KB021644v2_alt 90646 31 + 185823 CCTAACAGAATGGCTGTCGTCCCAAAGTCTG s panTro4.chr6 170674379 31 + 172623881 CCTAACagaatggctgtcgtcccaaagtctg i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172423285 31 + 174210431 CCTAACAGAATGGCTGTTGTTTCAAAGTCTG i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168106668 30 + 169853907 -CCTACAGAATGGCTGTCAGCTCGAAGTCTG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169062146 30 - 170955103 -CCTACAGAATGGCTGTCGTCTCAAAGACTG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163880338 31 + 165299245 CCCAACAGAATGGCTGTCATCTCAAAGTCTG i papAnu2.chr4 T 66 C 0 s chlSab2.chr13 96658014 31 + 98384682 CCTAACAGAATGGCTTTCGTCTCaaagtctg i chlSab2.chr13 C 0 T 66 e calJac3.chr4 169866452 629 + 171630274 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C a score=58086.000000 s hg38.chr6_KB021644v2_alt 90677 35 + 185823 AGGTTACCAGGCGTTGAGGAAGAGACCGATGCCTT s panTro4.chr6 170674410 35 + 172623881 aggttaccaggcattgaagaagagaccggtgcttt i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172423316 35 + 174210431 AGTTTGCCAGGCGTTGAAGAAGAGACCGGTGCCTT i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168106698 35 + 169853907 AGGTTACCAGATGTTGAAGAAGAGACCTGTGCCTT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169062176 35 - 170955103 AGGTTACCAGGTGTTGAAGAAGAGACCGGTGCCTT i macFas5.chr4 C 0 T 131 s papAnu2.chr4 163880369 35 + 165299245 AGGTTACCAGGCACTGAAGAAGAGACCGATGCCTT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96657979 35 + 98384682 AGGTTACCAGGCATTGAAGAAGAGACAGGTGCTTT i chlSab2.chr13 T 66 C 0 e calJac3.chr4 169866452 629 + 171630274 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C a score=3961.000000 s hg38.chr6_KB021644v2_alt 90712 4 + 185823 CCTA s panTro4.chr6 170674445 4 + 172623881 ccta i panTro4.chr6 C 0 T 132 s ponAbe2.chr6 172423351 4 + 174210431 CTTA i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168106733 4 + 169853907 CCTA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169062080 4 - 170955103 ccca i macFas5.chr4 T 131 C 0 s papAnu2.chr4 163880404 3 + 165299245 -CCT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96658014 4 + 98384682 CCTA i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169866452 629 + 171630274 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C a score=45512.000000 s hg38.chr6_KB021644v2_alt 90716 27 + 185823 ACAGAATGGCTGTCGTCTCAAAGTCTG s panTro4.chr6 170674317 27 + 172623881 ACAGAATGGCTGTCGTCTCAAAGTCTG i panTro4.chr6 T 132 C 0 s ponAbe2.chr6 172423355 27 + 174210431 ACAGAATGGCTGTCGTCCCAAAGTCTG i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168106737 27 + 169853907 AGAGAATGGCTGTCGTCTCAAAAACTG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169062084 27 - 170955103 acagaatggctgtcatctcgaagtctg i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163880407 27 + 165299245 ACGGAATGGCTGTCGTCTCAAAGACTG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96658018 27 + 98384682 ACAGAATGGCTTTCGTCTCaaagtctg i chlSab2.chr13 C 0 T 66 e calJac3.chr4 169866452 629 + 171630274 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C a score=144257.000000 s hg38.chr6_KB021644v2_alt 90743 100 + 185823 AGGTTACCAGGCATTGAAGAAGAGACCGATGCCTTCCTAACAGAATGGCTGTCGTCCCAAAGTCTGAGGTTACCAGGCGTTGAGGAAGAGACCGATGCCT s panTro4.chr6 170674344 100 + 172623881 AGGTTACCAGGCGTTGAAGAAGAGACCGATGCCTTCCTAACagaatggctgtcgtcccaaagtctgaggttaccaggcattgaagaagagaccggtgctt i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172423382 100 + 174210431 AGGTTACCAGGCGTTGAAGAAGAGACCGGTGCCTTCTTAACAGAATGGCTGTCGTCCCAAAGTCTGAGGTCACCAGGCATTGAAGAAGAGACCAGTGCCT i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168106764 74 + 169853907 AGGTTACCAGGGGTTGGAGAAGAGACCGGTGCCTTCCTAAGAGAACGGCTGTCGTCTCGAAGTCTGAGGTTAAC-------------------------- i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169062111 99 - 170955103 aggttaccaggtgttgaagaagaGACCAGTGCCTTCCTAC-AGAATGGCTGTCGTCTCAAAGACTGAGGTTACCAGGTGTTGAAGAAGAGACCGGTGCCT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163880434 99 + 165299245 AGGTTACCAGGTGTTGAAGAAGAGACCGGTGCCTTCCTAC-AGAATGGCTGTCATCTCGAAGTCTGAGGTAGCCAGGCGTTGAAGAAGAGACTGGTGCCT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96657979 100 + 98384682 AGGTTACCAGGCATTGAAGAAGAGACAGGTGCTTTCCTAACAGAATGGCTTTCGTCTCaaagtctgaggttaccaagtgttgaagaagagaccagtgcct i chlSab2.chr13 T 66 T 138 e calJac3.chr4 169866452 629 + 171630274 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C a score=7095.000000 s hg38.chr6_KB021644v2_alt 90843 5 + 185823 TCCTA s panTro4.chr6 170674444 5 + 172623881 tccta i panTro4.chr6 C 0 T 66 s ponAbe2.chr6 172423482 5 + 174210431 TCCTA i ponAbe2.chr6 C 0 C 0 s macFas5.chr4 169062210 5 - 170955103 TCCTA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163880533 5 + 165299245 TCCTA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96657941 5 + 98384682 TCCTA i chlSab2.chr13 T 138 C 0 e calJac3.chr4 169866452 629 + 171630274 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C e rheMac3.chr4 168106838 0 + 169853907 C a score=52252.000000 s hg38.chr6_KB021644v2_alt 90848 33 + 185823 ACAGAATGGCTGTCGTCTCAAAGTCTGAGTTTA s panTro4.chr6 170674383 33 + 172623881 ACagaatggctgtcgtcccaaagtctgaggtta i panTro4.chr6 T 66 C 0 s ponAbe2.chr6 172423487 33 + 174210431 ACAGAATGGCTCTCGTCCCAAAGTCTGAGGTTA i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168106838 28 + 169853907 -----ATGGCTGTCGTCTCGAAGTCTGAGGTTA i rheMac3.chr4 C 0 I 6 s macFas5.chr4 169062215 33 - 170955103 AGAGAATGGCTGTCGTCTCGAAGTCTGAGGTTA i macFas5.chr4 C 0 I 6 s papAnu2.chr4 163880538 33 + 165299245 AGAGAATGGCTGTCGTCTCAACGTCTGAGGTTA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96657946 33 + 98384682 AGAGAATGGCTGTTGTCTCAACGTCTGAGGTTA i chlSab2.chr13 C 0 I 6 e calJac3.chr4 169866452 629 + 171630274 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C a score=12762.000000 s hg38.chr6_KB021644v2_alt 90881 7 + 185823 CCAGGCA s panTro4.chr6 170674416 7 + 172623881 ccaggca i panTro4.chr6 C 0 T 66 s ponAbe2.chr6 172423520 7 + 174210431 CCAGGCA i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168106872 7 + 169853907 CCAGGCA i rheMac3.chr4 I 6 C 0 s macFas5.chr4 169062254 7 - 170955103 CCAGGCA i macFas5.chr4 I 6 C 0 s papAnu2.chr4 163880571 5 + 165299245 --AGGCA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96657985 7 + 98384682 CCAGGCA i chlSab2.chr13 I 6 C 0 e calJac3.chr4 169866452 629 + 171630274 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C a score=43947.000000 s hg38.chr6_KB021644v2_alt 90888 25 + 185823 TTGaagaagagaccgatgccttcct s panTro4.chr6 170674357 25 + 172623881 TTGAAGAAGAGACCGATGCCTTCCT i panTro4.chr6 T 66 C 0 s ponAbe2.chr6 172423527 25 + 174210431 TTGAAGAAGAGACCGATGCCTTCCT i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168106879 25 + 169853907 TTGAAGAAGAGACGGGTGCTTTCCT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169062261 25 - 170955103 TTGAAGAAGAGACGGGTGCTTTCCT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163880576 25 + 165299245 TTGAAGAAGAGACGGGTGCTTTCCT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96657992 25 + 98384682 TTGAAGAAGAGACAGGTGCTTTCCT i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169866452 629 + 171630274 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C a score=887148.000000 s hg38.chr6_KB021644v2_alt 90913 388 + 185823 aacagaatggctgtcgtcccaaagtctgaggttaccaggcgttgaagaagagaccggtgctttcctacagtgctggtgggaatgttcaatg-gtacaagcattggaaaacattcactggaaagagattggcagtttattaaaaaatatgcatctacttactgtgtaaatcagcagttcggtcctataaatacac-ccaagataaaggaaagcacatgtccacacaaagacttgaatctgaatgttcatagcaccattactc-----------ataatagctccaaattagaaacgacctaagtgtccataaggagacacgtgaataagcacattgtggtgacactttcatactgttgggtattatttaccaattaggaaaaagc-agctacccatgcattca s panTro4.chr6 170674382 388 + 172623881 AACagaatggctgtcgtcccaaagtctgaggttaccaggcattgaagaagagaccggtgctttcctacagtgctggtgggaatgttcaatg-gtacaagcattggaaaacactcactggaaagagattggcagtttattaaaaaatatgcatctacttactgtgtaaatcagcagttcggtcctataaatacac-ccaagataaaggaaagcacgtgtccacacaaagacttgaacctgaatgttcatagcaccattattc-----------ataatagctccaaattagaaacgacctaagtgtccataaggagacacgtgaataagcacattgtggtgacactttcataccgttgggtattatttaccaattaggaaaaagc-agctacccatgcattca i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172423552 389 + 174210431 AACagaatggctgtcgtctcaaagtctgaggttaccaggcgttgaagaagagatcagtgccttcctacagtgctggtgggaatgttcaatg-gtacaagcattgaaaaacattcactggaaagagattgacagtttattaaaaaatatgaatctacttactgtgtaattcagcagttcggtcctataaatacac-acaagataaaggaaagcacatgtccacacaaagacttgaacctgaatgttcatagcaccattattc-----------ataatagctccaaattagaaacgacctaagtgtccatcaggagacacgtgaataagcacattgtggtgatacattcatactgttgggtattatttaccaattaggaaaaagcaagctaccaatgcattca i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156289417 389 + 157873769 aacagaatggctgtcgtctcaaagtctgaggttaccaggcattgaagaagagaccggtgcctttctacagtgctggtgggaatgttcaatg-gtacaagcattcgaaaacatccactggaaagagattgacagtttatttaaaaatatgcatctacttactgtgtaaatcagcagttcgatcctataaatacac-gcaagataaaggaaagcacatgtccacacaaagacttgaacctgaatgttcatagcaccattattc-----------ataatagctccaaattagaaacgacctaagtgtccatcaggagacacgtgaataagcacattgtggtgatacattcataccgttgggtattatttaccaattaggaaaaagcaagctaccaatgcattca i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168106904 400 + 169853907 AACAGAATGGCTTTCGTCTCaaagtctgaggttaccaggtgttgaagaagagaccggtgccttcctatagtgctggtgggaatgttcaatgcctacacgcattggaaaacattcactggaaagagattgacagtttatttaaaactatgcatctgcttactgtataaatcagcagttcagtcctataaatacacaccaagataaaggaaatcacatgtc--cacagagacttgaagctgaatgttcatagcaccattattcataatttatttataatagttccaaattagaaacgacctaagggtccatcaggagacacatgaataagcacattgtggcgatacattcataccattgggtattatttaccacttaggaagaaacaagctaccaatgcattca i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169062286 399 - 170955103 AACAGAATGGCTTTCGTCTCaaagtctgaggttaccaggtgttgaagaagagaccggtgccttcctatagtgctggtgggaatgttcaatg-ctacacgcattggaaaacattcactggaaagagattgacagtttatttaaaactatgcatctgcttactgtataaatcagcagttcagtcctataaatacacaccaagataaaggaaatcacatgtc--cacagagacttgaagctgaatgttcatagcaccattattcataatttatttataatagttccaaattagaaacgacctaagtgtccatcaggagacacgtgaataagcacattgtggcgatacattcataccattgggtattatttaccacttaggaagaaacaagctaccaatgcattca i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163880601 398 + 165299245 AACAGAATGGCTTTCGTCTCAAAGTCTGAGTTTACCAAGCGTTGAAGAAGAGACCGATGCCTTCCTatagtgctggtgggaatgttcAACG-GTACCCGCATTGGAAAACATTCACTGGAAAGAGATtgacagtttatttaaaaatatgcatctgCTTACTGTATAAATCAGCAGTTCAGTCCTATAAATACATACCAAGATAAAGGAAATCACATGTC--CACAGAGACTTGAAGCTGAATATTCATAGCACCATTATTCCtaatttattcataatagttcCAAATTAGAAACGACCTACGTGTCCATCAGGAGACATGTGAATAAGCACATTGTGGTGATACATTCATACCATTGGGTATTATTTACCACTTAGGAAGAAACAAGCTACCAATGCA-TCA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96658017 398 + 98384682 AACAGAATGGCTTTCGTCTCaaagtctgaggttaccaagtgttgaagaagagaccagtgcctacttatagtgctggtgggaatgttcaacg-gtacacgcattggaaaacattcactggaaagagattgacagtttatttaaaaatatgcatctgcttactgtataaatcagcagttcagtcctataaatacacgccaagataaaggaaatcacatgtc--cacagagacttgaagctgaatgtccatagcaccattattcataatttattcataatagttccaaattagaaacaacctacgtgtccattaggagacatgtgaataagcacattgtggtgatacattcata-cattgggtattatttaccacttaggaagaaacaagctatcaatgcattca i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169866452 629 + 171630274 I e canFam3.chr1 56161027 1683 + 122678785 I a score=1768003.000000 s hg38.chr6_KB021644v2_alt 91301 638 + 185823 aaaccctgaatgagtcataaacacatcgtgtagaatagagagggcagacacagaggcatgtgtattgagtgttttacgttcatgcaatttctagaa----aaatctgtggagaaag-aaatcagtattcgggggggctaagagactggaggtgaactc----gaggcatgacggaaattttgggggtcatgggaatgtttaaaactgaattatggtgttacat-cataactccataaattcaatgaaaatcattcaattatgcatttacaatgggtgaatattatgacatataaattgtaccacaataaagctgtgaaaaaaATGAAGATGACATAAAAATTTGTTT-----------Caaac-aaaaaccagatgggcaaaatagaaacctaagagcaaacgtgtggctttagcctcaaccatgttgatcatcatgttaaatacgaatggtctcaaAGGACCACATACTCTATGGCCC-ATCAGTCTAGACGTCAGGAAAATGCAAGCTCATCTTCTGTGTCAGTGGTTGCCTGGGGATAGAGGGAGGACAAGG---TAAAAATGAGAGATCACAAAGGGGCACAGATATATACCTACCGCAAGCCTTTCAAATTGC--ACACAAAAAAATGTGCAACTTATTAAATATTA----TACCACAGTAAAGA s panTro4.chr6 170674770 633 + 172623881 aaaccctgaatgagtcacaaacacatcgtgtagaatagagagggcagacacagaggcatgcgtattgagtgttttacgttcatacaatttctagaa----aaatctgtggagaaag-aaatcagtatttgggggggctaagagactggaggtgaactcagatgaggcatgagggaaattttgggggtcatgggaatgtttaaaactgaattatggtgttacat-cataactccataaattcaatgaaaatcattcaattatgcatttacaatgggtgaatattatgatatataaattgtaccacaataaagctgtgaaaaaaATGAAGATGACATAAAAATTTGTTT-----------Caaac-aaaaaccagatgggcaaaatagaaacctaagagcaaacgtgtggctttagcctcaaccatgttgatcatcatgttaaatacgaatggtctcaaAGGACCACATACTCTATGGCCC-ATCAGTCTAGACGTCAGGAAAATGCAAGCTCATCTTCTGTGTCAGTGGTTGCCTGGGGATAGAGGGAGGAC----------------GAGATCACAAAGGGGCACAGATATATACCTACCGCAAGCCTTTCAAATTGC--ACACAAAAAAATATGCAACTTATTAAATATTAATTATACCACAGTAAAGA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172423941 646 + 174210431 aaaccctgaatgaatcacaaacacattgtgtagaatagagagggcagacacagaggcatgcatattgagtgttttacgttcatgcaatttctagaaaaacaaatctgtggaga----aaatcagtattttggggggctaagagactggggatgaactcagatgaggcatgagggaaattttgggggtcatgggaatgtttaaaactgaattatggtgttatat-cataactccataaattcaatgaaaatcattcaattatgcatttacaatgggtgaatattatgatatataaattgtaccacaataaagctgtgaaaaaaATGAAGATGACATAAAAATTTGTTT-------Caaacaaac-aaaaaccagatgggcaaaatagaaacctaagagcaaacatgtggctttagcctcaaccatgttgatcatcatgttaaatacgaatggtctcaaAGGAGCACATACTCTAGGGCCC-ATCAATCTAGACGTCAGGAAAATGCAAGCTCATCTCCAGTGTCAGTGGTTGCCTGGGGATAGAGGGAGGATGAGG---TAAAAGTGAGACATCACAAAGAGGCACAGATATACACCTACCACAAGCCTTTCAAATTGC--ACAC-AAAAAATGTGCAACTTATTAAATATTA----TACCACAGTAAAGA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156289806 658 + 157873769 aaaccctgaatgaatcacaaacacatcgtgtagaatagagagggcagacacagaggcatgcgtattgagtgttttacgttcatgcaatttctagaaaaacaaatctatggagaaagaaaatcagtattttggggggctaagaggctggaggtgaactcagatgaggcatgagggaaattgtgggggtcatgggaatgtttaaaactgaattatggtgttacat-cataactccataaattcaatgaaaatcattcaattatacgtttacaatgggtgaatattatgatatataaattgcaccacaataaagctgtgaaaaaaATGAAGATGACATAAAAATTTGTTT---CGAACAAACACAC-AAAAACCAGATGGGCAAAATAGAAACCTAAGAGCAAACGTGTGGCTTTAGCCTCAACCATGTTGATCATCACGTTAAATACGAATGGGCTCAAAGGAGCACATACTCTATGGCCC-ATCAATCTAGACATCAGGAAAATGCAAGCTCATCTCCAGTGTCAGTGGTTGCCTGGGGATAGAGGGAGGAGGAGG---TAAAAATGAGAGATTGCAAAGGGGcacaggtatatacctatggcaagcctttcaaattgc--acac-aaaaaatgtgcaacttattaaatattaattattccacagtaaaga i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168107304 662 + 169853907 aaaccctgaatgaatcacaaacacatcatgtagagtagagagggcagacacagaggcgtgcgtattgagtgttttgcgttcatgcaatttctagaaaaacaaatctgtggagaaagaaaatctgtactttggggggctaagagactggaggtgaactcagacgaggcatgagggaaattttgggggtcacaggaacgtttaaaactgaattattgtgttgtgtgcataactccataaattcaatgaaaatcattcaattatgcatttacaatgggtgaatattatgatagataaattctaccacaataaagctgtgaaaaaaATGAAGATGACATAAGCATTGCTTcaaacaaacaaacaaac-aaaAACcagatgggcaaaatagaaacctaagagcaaatgtgtggctttagcctcaaccatattgatcatcatgtt-aatacaaataggctcaaAAGAGTACATCCTCTATGGCCC-ATCAATATAGACATCAGGAAAATGCAAGCTCATCTCCAGTGTCAGTGGTTGCCTGGGGATAGATGGAGGACGAGG---TAAAAATGAGGGATCACAAAAGGGcacagatatatacctacggcaagcctttcaaatcgt--acacaaaaaaatgtgcaacttattaaacattaattataccacagtaaaga i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169062685 660 - 170955103 aaaccctgaatgaatcacaaacacatcatgtagagtagagagggcag--acagaggcgtgcgtattgagtgttttgcgttcatgcaatttctagaaaaacaaatctgtggagaaagaaaatctgtactttggggggctaagagactggaggtgaactcagacgaggcatgagggaaattttgggggtcacaggaacgtttaaaactgaattattgtgttatgtgcataactccataaattcaatgaaaatcattcaattgtgcatttacaatgggtgaatattatgatagataaattctaccacaataaagctgtgaaaaaaATGAAGATGACATAAGCATTGCTTCaaacaaacaaacaaac-aaaaaccagatgggcaaaatagaaacctaagagcaaatgtgtggctttagcctcaaccatattgatcatcatgtt-aatacaaataggctcaaAAGAGTACATCCTCTATGGCCC-ATCAATATAGACATCAGGAAAATGCAAGCTCATCTCCAGTGTCAGTGGTTGCCTGGGGATAGATGGAGGACGAGG---TAAAAATGAGGGATCACAAAAGGGcacagatatatacctacggcaagcctttcaaatcgt--acacaaaaaaatgtgcaacttattaaacattaattataccacagtaaaga i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163880999 664 + 165299245 AAACCCTGAATGAATCACAAACACATTGTTTAAAGTGGAGAGGGCAGACACAGAGGCGTGCGTATCGAGTGTTTTACGTTCATGcaatttctagaaaaacaaatctgtggagaaagaaaatctgtaCTTT-GGGGGCTAAGAGACTGGAGGTGAACTCAGACGAGGCATAAGGGAAATTTTGGGGGTCACAGGAACGTTTAAAACTGAATTATTGTGTTACGTGCATAACTCCATAAATTCAATGAAAATCATTCAATTATGCATTTACAATGGGTGAATATTATGATATATAAATTCTACCACAATAAAGctgtgaaaaaaatgaagatgacataaaaattgtttcaaacaaacaaacaaac-aaaaaccagatgggcaaaaTAGAAACCTAAGAGCAAATGTGTGACTTTAGCCGCAACCATATTGATCATCATGTTAAATACAAATGGGCTCAAAAGAGTACATACTCTATGGCCC-ATCAATATAgacatcaggaaaatgcaagcTCATCTCCAGtgtcagtggttgcctggggataGATGGAGGACAAGG---TAAAAATGAGAGATCACAAAGGGGCACAGATACATACCTACGGCAAGTCTTTCAAATcgtacacacaaaaaaatgtgcaACTTATTAAACACTAATTATACCACAGTAAAGA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96658415 665 + 98384682 aaaccctgaatgaatcacaaacacatcgtgtaaagtggagaaggcagacacagaggcgtgcgtatcaagtgttttgagttcatgcaatttctagaaaaacaaatctgtggagaaagaaaatctgtactttggggggctaagagactggaggtgaactcagacgaggcatgagggaaattttgggggtcacaggaacgtttaaaactgaattattgtgttacgtgcataactccataaattcaatgaaagtcattcaattatgcatttacaatgggtgaatattatgatatataaattctaccacaataaagctgtgaaaaaaATGAAGATGACATAAGCATTGTTTCaaacaaacaaacaaac-aaaaaccagatgggcaaaatagaaacctaagagcaaatgtgtggctttagcctcaaccatattgatcatcatgttaaatacaaatgggctcaaAAGAGTACATCCTCTATGGCCC-AACAATATAGACGTCAGGAAAATGCAAGCTCATCTCGAGTGTCAGTGGTTGACTGGGGATAGATGGAGGACAAGG---TAAAAATGAGAGATCACAAAGGGGcacagatacatacgtacggcaagcctttcaaatcgtacacacacaaaaatgtgcaacttattaaatattaattataccacagtaaaga i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169867081 653 + 171630274 aaaccccaaatgaatcacacacacatcgtgaagagtagagagggcagacacagaggtgtgcacattgaatatttgatgttcatgtaatttctagaaaaa-aaatctgtggagaaagaaaatcagtagtttgggagtctgagagactggaggtgaactcagatgaggcatgagggaaatgttgggggtcgtgggaatgctgaaaactgaattgtggtgttacgtggaaaactccataacttcaatggaaatcattcaattatgcatttacaacgggtgaatattatgatatataaattctacctcaacaaagctgtg-aaaaaaTAAAGATGATGTGAAAATTTGTTT---CaaacagacaaacaaaaaaacagatgggcaaaatagaaacccaagggcaaatgtgtggctttgatctcaaccttactgatcatcaggctaaatataaatggtctcgaaacaGTACATACTCTATGGCCCTATCAACACAGAAGTCAGGACGACGAAAGCTGGTCTTCGGGGTCCGTGGTTGCCT-GGGACGGAGGGAGCAGGAGGAGCTAAACATGAGAGACCATAAAGCCGCACAGATGTACAGCTGCGGCCAACC-TTCTGCCTGC--ACAC-GGAAGAGCTGCAGCTTATCAGGTA-------TACCATGGCAAAGA i calJac3.chr4 I 629 I 344 e canFam3.chr1 56161027 1683 + 122678785 I a score=13244.000000 s hg38.chr6_KB021644v2_alt 91939 5 + 185823 TGCAA s panTro4.chr6 170675403 5 + 172623881 TGCAA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172424587 5 + 174210431 TGCAA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156290464 5 + 157873769 tgcaa i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168107966 5 + 169853907 tgcaa i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169063345 5 - 170955103 tgcaa i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163881663 5 + 165299245 TGCAA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96659080 5 + 98384682 tgcaa i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169867734 344 + 171630274 I e canFam3.chr1 56161027 1683 + 122678785 I a score=2459917.000000 s hg38.chr6_KB021644v2_alt 91944 970 + 185823 AAAATGAAATAAAACTTATCAAATTATATGCTTCCAACATATATAGCTTATTTTAT----GTTACAGCTaaatatacatacataataaaaactaaaa----ataaaaTGTGATAAGATCCCTAAAGACTTGCTCTGTGAGCTTAAAAATTCCATTACATCCATAtt-----ttttttt-atttttattttttgagacagagtctcactctgtcacccaggctggagtgcagtggcacaatctaggctcactgcaacttctgcctcccaggttcacgctattctcctgtcacagcctcccgagtagctgggattacaggcatgtgccaccatgcctggctaatttttgtatttttagtagagatggggttttaacac----attggccaggctggtcaggctggtcttgaactcctgacctcaggtgatcctcctgccttggcctcccgaagtgctgggattacaggcatgcgccaccacgcccggccTTCATTTAT-TTTTTGTATTCCC-TCAGAATCCTGCATGCTGAATATGTATTTAAAAGATTTTAAaaatgttattgttttaaacaatcca-tttaaaaaa--aaagattgtcagactggat-aaaataacaggactgaaatatatgctgcctaca-------------------------------------------------------------------------------agaaaca------aactataaatata----ggtgaaacgtaaaataaaagaa-aaaagctactcaggcaaacatcagacat-aaaatgcagatgtgttaacgtgagacaagtagacctGGGGTTTTCAGGGCTTTGAGGTGC------GAGGACAGCGTTATGTTAGTGGTGGAGTTCCTGTCCTAACAGGAGTGCAGTAAGGCCTCCTTTAAGCAGAGACTGCAGAATGAAGGAAGGCTGAGCAATCTCGTGGCCCTGTGGCTCTTGTCCTGCACTGGTAGCTGCTCCAGAGGGCCCGTGAAGTTCCTGCCCCACCATGCATCTTCTGCACATT--------GGTGCACGATGCGGAAGGGTTTCAGTGCACTTGGA s panTro4.chr6 170675408 979 + 172623881 AAAATGAAATAAAGCTTATCAAATTATATGCTTCCAACATATATAGCTTATTTTAT----GTTACAGCTAAATATACATACATAATAAAAACTAAAA-----CAAAATGTAATAAGATCCCTAAAGACTTGCTCTGTGAGCTTAAAAATTCTATTACATCCATAtt-----ttttttttatttttattttttgagacagagtctcactctgtcacccaggctggagtgcagtggcacaatctaggctcactgcaacttctgcctcccaggttcacactattctcctgtcacagcctcccgagtagctgggattacaggcatgcgccaccatgcctggctaatttttgtatttttagtagagatggggttttaacac----attggccaggctggtcaggctggtcttgaactcctgacctcaggtgatcctcccgccttggcctcccgaagtgctgggattacaggcatgcgccaccacgcccagccTTCATTTAT-TTTTTGTATTCCCCTCAGAATCCTGCATGCTGAATATGTATTTAAAAGATTTTTAaaatgttattgttttaaacaatcca-tttaaaaaa--aaagattgtcagactggat-aaaataacaggactgaaatatatgctgcctaca-------------------------------------------------------------------------------agaaaca------aactataaatata----ggtgaaacgtaaaataaaagga-aaaagctactcaggcaaacatcagacat-aaaatgcagatgtgttaacgtgagacaagtagacctGGGGTTTTCAGGGCTTTGAGGTGC------GAGGACAGCGTTATGTCAGTGGTGGAGTTCCTGTCCTAACAGGAGTGCAGTAAGGCCTCCTTTAAGCAGAGACTGCAGAATGAAGGAAGGCTGAGCAATCTCGTGGCCCTGTGGCTCTTGTCCTGCACCGGTAGCTGCTCCAGAGGGCCCGTGAAGTTCCTGCCCCACCATGCATCTTCTGCACATCTGCACATCGGTGCTCGATGCGGAAGGGTGTCAGTGCACTTGGA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172424592 988 + 174210431 AAAATGAAATAAAGCTTATCAAATTATATACTTCAAACATATATAGCTTATTTTATGTTAGTTATAGCTACATATACATACGTAATAAAAACTAAAAATAAACAAAATGTGATAAGATCCCTAAGGACTTGCTCTGTGAGCTTAAAAATTCCATTACATCCATAttta---ttttttttatttttattttttgagacggagtctcactctgtcacccaggctggagtgcagtggcacaatctaggctcactgcaacttctgcctcccaggttcacgctattctcctgtcacagcctcccgagtagctgggattataggcatgcaccaccatgcctggctaatttttgtatttttagtagagatggggttttaacac----attggccaggctggtcaggctggtcttgaactcctgacctcaggtgatcctcccaccttggcctcccgaagtgctgggataacaggcatgagccaccacacccagccTTCATTTAT-TTTTTGTATTCCCCTCAGAATCCTGCATGCTGAGTATGTGTTTAAAAGATTTTAAaaatgttaatgttttaaacaatcca-ttt-aaaaa--aaagattgtcagactggataaaaataacaggactgaaatatatgctgcctaca-------------------------------------------------------------------------------agaaacgaactataactataaatata----ggtaaaatgtaaaataaaagaa-aaaagctactcaggcaaacatcagacat-aaaatgcagatgtgttaacgtgagacaagtagacctGGGGTTTTCAGGGCTTTGAGGTGT------GAGGACAGCGTTATGCTAGTGGTGGAGTTTCTGTCCTAACAGGAGTGCAGTAAGGCCTCCTTTAAGCAGAGACTGCAGGATGAAGGAAGACTGAGCAATCTCGTGGCCCTGTGGCTCTTGTCCTGCACCAGTAGCTGCTCCAGAGGGCCCATGAAGTTCCTGCCCCACAATGCATCTTCTGCACATC--------GGTGCTCGATGCAGAAGGGTTTCAGCGCCCTTGGA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156290469 989 + 157873769 aaaaTGAAATAAAACTTATCAAATTATATGCTTCAAACGTATATAGCTTATTTTATGTTAGTTACAGCTaaatatatatacataataaaaactaaaaataaaCAAAATGTGATAAGATCCCTAAGGACTTGCTCTGTGAGCTTAAACATTCCATTACATCCATAtttatttatttttttatttttattttttgagatggagtctcactctgtcacccaggctggagtgcagtggcacaatctaggctcactgcaacttctgcctcccaggttcaagctgttctcctgtcacagccccccgagtagctgggattacaggcatgcgccaccatgcctggctaatttttgtatttttagtagagatggggttttaacacattgattggccaggctggtcaggctggtcttgaactcctgacctcaggtgatcctcccgccttggcctcccaaagtgctgggattacaggcatgagccaccatgcctggccTTCATTTAT-TTTTTGTATTCCCCTCAGAATCCTGCATGCTGAGTATGTGTTTAAAAGATTTAAAaaatgttaatgttttaaacaatcca-ttt-taaaa--aaagattgtccgactggat-aaaataacaggactgaaatatatgctgcctaca-------------------------------------------------------------------------------agaaacaaactataactataaatata----ggtga-----aaagtaaaagaa-aaaagctactcaggccaacatcagacat-aaaatgcagatgtgttaacgtgagacaagtagacctGGGGTTTTCAGGGCTTTGAGGTGT------GAGGACAGCATTATGCTAGTGGTGGAGTTTCTGTCCTAACAGGAGTGCAGTAAGGCCTCCTGTAAGCAGAGACTGCAGAATGAAGGAAGGCTGAGCAGTCTCGTGGCCCTGTGGCTCTCGTCCTGCACCGGTAGCTGCTCCAGAGGGCCTGTGAAGTTCCTGCCCCACAGTGCATCTTCTGCACATC--------GGTGCTCGATGTAGAAGGGTTTCAGTGCCCTTGGA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168107971 1026 + 169853907 aaaaTGAAGTAAAGCTTATCAAATTATATGCTTCCAAC--ATATAGCTTATTTTATGTTAGTTATAGCTAAATATACATGtataataaaaattaaaaataaaCAAAG-GTGATAAGATCCCTAAGGACTTGCTCTGTGAGGTTAAAGATTCGATGACATCTAttttt----atttatttatttttattttttgagatggagtctcactctctcgcccaggctggagtgcagtggcacgatctaggctcattgcaaccttcacctgccatattcaagctattcttctgtcacagccccccaagtatctgggatcataggcatgcaccaccatgtccagctaatttttgtattttcagcagagacaggggttcagcac----attggc---------caagctggtcttgaactcctgacctcaggtgatcctcccgccttggcatcccaaagtactgggattacaggcatgagccaccatgcccagccTACATTTATATTTTTGTACTCCTCTTAGAATCCTGCATGCTGAGTATGTGTTTAAAAGATTTAAAaaatgttaatgttttaaacaatcca-ttt-aaaaggcaaaggttgtcagactggat-aaaataacaggactgaaatatatgctgcctacaagaaacaaaccataagtacaaatacagatacataactacaaatacagatacaaa----------------------tacagaaacaaaCCATAACTACAAATACA-----GTGAAAAGTGAAATAAAAGAAGAAAAGCTACTCAGGCAAACATCAGACACAAAAATGCAGATGTGTTAGCGTGAGACAAGGAGACCTGGGGTTTCCAGGGCTTTGAGGTGTGAGGAAGAGGATGGCCTTATGCTGGTGGTGGATTTTCTGTCCTAACAGGAGTGCAATAAGGCCTCTTTCAATCAGAGGCTGCAGAATGAAGGAAGACTGAGCAATC---------------TCTTGTCCTGCACTGGCAGCTGCTCCAGAGGGCCCATAAAGTTCCTGCCCCACAGCGCATCTTCTGCACATC--------AGTGCTCCATGCAGAAGGGTTTCAGTGCACTGGGG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169063350 1026 - 170955103 aaaaTGAAGTAAAGCTTATCAAATTATATGCTTCCAAC--ATATAGCTTATTTTATGTTAGTTACAGCTAAATATACATGTATAATAAAAATTTAAAATAAACAAAG-GTGATAAGATCCCTAAGGACTTGCTCTGTGAGGTTAAAGATTCGATGACATCTAttttt----atttatttatttttattttttgagatggagtctcactctctcgcccaggctggagtgcagtggcacgatctaggctcattgcaaccttcacctgccagattcaagctattcttctgtcacagccccccaagtatctgggatcataggcatgcaccaccatgtccagctaatttttgtattttcagcagagacagggtttcagcac----attggc---------caagctggtcttgaactcctgacctcaggtgatcctcccgccttggcatcccaaagtactgggattacaggcatgagccaccatgcccagccTACATTTATATTTTTGTACTCCTCTTAGAATCCTGCATGCTGAGTATGTGTTTAAAAGATTTAAAaaatgttaatgttttaaacaatcca-ttt-aaaaggcaaaggttgtcagactggat-aaaataacaggactgaaatatatgctgcctacaagaaacaaaccataactacaaatacagatacataactacaaatacagatacaaa----------------------tacagaaacaaaccataactacaaataca-----GTGAAAAGTGAAATAAAAGAAGAAAAGCTACTCAGGCAAACATCAGACACAAAAATGCAGATGTGTTAGCGTGAGACAAGGAGACCTGGGGTTTCCAGGGCTTTGAGGTGTGAGGAAGAGGATGGCCTTATGCTGGTGGTGGATTTTCTGTCCTAACAGGAGTGCAATAAGGCCTCTTTCAATCAGAGGCTGCAGAATGAAGGAAGACTGAGCAACC---------------TCTTGTCCTGCACTGGCAGCTGCTCCAGAGGGCCCATAAAGTTCCTGCCCCATAGCGCATCTTCTGCACATC--------AGTGCTCCATGCAGAAGGGTTTCAGTGCACTGGGG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163881668 981 + 165299245 AAACTGAAGTAAAGCTTATCAAATTATATGCTTCCAACATATATAGCTTATTTTATGTTAGTTACAgctaaatatacatgtataataaaaattaaaaataaacaaat-gtgataAGATCCCTAAGGACTTGCTCTGTGAGGTTAAAGATTCGattacatctattttt----atttatttatttttattttttgagatggaatctccctttctcacccaggctggagtgcagtggcacgatctaggctcattgcaaccttcacctgccagattcaagcta---ttctgtcacagcctcccaagtatctgggatcataggcatgcaccaccatgtccagctaatttttgtatttttagcagagaca-ggtttcagcac----attggc---------caagctggtcttgaactcctgacctcaggtgatccacctgacttggcatcccaaagtgctgggattacaggcatgagccaccatgcccagcctacatttatatttttgtactcTTCTTAGAATCCTGCATGCTGAGTATGTgcttaaaagatttaaaaaatgttaatgttttaaacGATCCA-TTT-AAAAGGCAGTGGTTGTCAGACTGGAT-AAAATAACAGGACTGaaatatatgctgcctaca-------------------------------------------------------------------------------agaaacaaaCCATAACTACAAAtaca-----gtgaaaagtgaaataaaagaggaaaagctACTCAGGCAAACATCAGACACAAAAATGCAGATGTGTTAGCATGAGACAAGGAGACCTGGGGTTTCCAGGGCTTTGAGGTGTGAGGAAGAGGACAGCTTTATGCTAGTGGTGGATTTGCTGTCCTAACAGGAGTGCAATAAGGCCTCTTtcaagcagaggctgcagaatgaAGGAAGTCTGAGCAATCTCGTGGCCCTGTGGTTCTTGTCCTGCACTGGCAGCTGCTCCAGA-GGCCCGTAAAGTTCCTGCCCCACAGCGCATCTTCTGCACATC--------CGTGCTCCATGCAGAAGAGTTCCAGTGCacttggg i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96659085 1029 + 98384682 aaaCTGAAGTAAAGCTTATCAAATTATATGCTTCCAACATATATAGCTTATTTTATGTTAGTTACAGCTAAATATACATGTATAATAAAAATTAAAAATAAACAAAG-GTGATAAGATCCCTAAGGACTTGCTCTGTGAGGTTAAAGATTCGATGACATCTAttttt----atttatttatttttattttttgagatggagtctcactctctcgcccaggctggagtgcagtggcacgatcgaggctcattgcaaccttcacctgccagattcaagctattcttctgtcacagcctcccgagtatctgggatcataggcatgcaccaccacgtccagctaatttttgtattttcagtagagacaggatttcagcac----attggc---------caaactggttttgaactcctgacctcaggtgatcctcccgccttggcatcccaaagtgctgggattacaggcatgagccaccatgcccagccTACATTTATGTTTTTGTACTCCTCTTAGAATCCTGCATGCTGAGTATGTGGTTAAAAGATTTTAAaaatgttaacgttttaaatgatccatttt-aaaaggcaaaggttgtcagactggat-aaaataacaggactgaaatatatgctgcctacaagaaacaaaccataactataaatacagatac----------------------ataactacaaatacagatacaaatacagaaacaagccataactacaaataca-----gTGAAAAGTGAAATAAAAGAAGAAAAGCTACTCAGGCAAACATCAGACACAAAAATGCAGATGTGTTAGCATGAGACAAGTAGACCTGGGGTTTCCAGGGCTTTGAGGTGTGAGGAAGAGGACAGCCTTATGCTAGTGGTAGATTTTCTGTCCTAACAGGAGTGCAATAAGGCCTCTTTCAATCAGAGGCTGCAGAATGAAGGAAGACTGAGCAATC---------------TCTTGTCCTGCACTGGCAGCAGCTCCGGAGGGCCCGTAAAGTTCCTGCCCCACAGCGCATCTTCTGCACATC--------CATGCTCCATGCAGAAGGGTTTCAGTGCACTTGGA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169868078 930 + 171630274 AAAATGAAATAACGCTTATCAAATCGTATGCTTCAAGAGTGTGTCGTTTATTTTATGTTAGTTGTAGCTAAAGCTATACATATAATAAAAAGTAAAAAGAAACAAAACATAATAAGATCCCTAAGGACTTGCTCTGTGAGCTCAAAGATTCATTTGCATCTGttttt----atttatttgtttttactttttgagacagagtctcactctgtcacccaggccagcatgcagtggcgtgatctaggctcactgcaacgtctgcctcctgggttcaagtgattctcctgcctcagcctcctgagaagcttggattacaggcactcaacaccatacccagctaatttttgcatttctagtagagaaggcatttcactat----gttggc---------caggatggtcttgatcttttgacctt--gtgatccacccacctcggtctcccaaagtgctgggattacaggcatcagccaccgtgcccagccCACATTTAT-TTTTTGTACTTTCCTTAGAATCCTGCATGCTGAGTATGTGTTTAAAAGACTTAAAAAATGTTAACGTTTTAAAGAATACA-TTT-AAAAGACAAAGACTGTCAGACTG-----------------------------------CA--------------------------------------------------------------------------------------------AACTATAAATATAGATGGGTGAAAAGTTAAATA-------AATTGCTGCTCGGGCAAACATCGGACATAAAACTGCAGAC-TGTTATGGTGAGGCGAGCAG-CCTGGGG-CTCTAAGGTCTCGAGGTGTCAGGAGGAGGACCGCCTTGTGCCCCTGGTGGAGCTGCTGTCCTAACAGGAGCGTGGTAAAGTCTCCTATAAGCAAAGGTTGCAGATTGGAGGAAGACAGAGCAACGTCATGGCCT--GAGCTCTTGTCCTGCACCAGCAGCTGCTCCAGAGGGATCCCAAGTTTCCTGCCCCACGATGCATCTTCTGCACATG--------AGTGCGTGATGCAGAATGGCTTCAGTGGACTTGGA i calJac3.chr4 I 344 C 0 e canFam3.chr1 56161027 1683 + 122678785 I a score=1951830.000000 s hg38.chr6_KB021644v2_alt 92914 611 + 185823 ATGCCAAGGTGAAAGTCTCATTTATTACACAGCATGGACACATAAATCAGGAATTTTCAGTCAATACA-AACA-----TTTATTTTGATATAAA-AAATAATTGTTTCT----TGTGTGGCTGACAAAGAGTTAAAAAATCAGGAATGCAGGCAGACTTTGAGAATGATGTATCTTTGCTTACTCTTCTTGACAGGTTTCCTATT----ATTCATGGAAATCGGGGAATTCTGGCATCTTTTCAGGCCACCTGTAGAACATCTGGCATTCGTTTA-GGAAAACGAGTTCATTAAAGAAACTATAATTTATTTGACTACTTTGGCACTCATGGG-ATACACTTGGTTGTCAATACTCTGGGCAAA----TTTGTGGGTGGGTAATTCTATGAGTGAGCAAACAACAGGGAAGAAACTCTTTTG--GAAGAGCTTGTG--CTTTGAATCCAGCCTGGATCAACACTGACAAGGCAGGGCTTGTCTCTTCTCCACAGT---GACCACAGATATCCATTCTGAGTTTATAATGATTGTGA-TTTTTT-------TTGTTTACCACAGCATTACATTTTTACTAAGCAGGTCACATGTGCCAATGCCTAA------TCACCA-GGCTACTAAAGAATAAAGCAAAACATGTAAAAGAGC s panTro4.chr6 170676387 609 + 172623881 ATGCCAAGGTGAAAATCTCATTTATTACACAGCATGGACATATGAATCAGGAATTTTCAGTCAATACA-AACA-----TTTATTTTGATATAAA-AAATAATTGTTTCT----TGTGTGGCTGACAAAGAGTTAAAAAATCAGGAATGCAGGCAGACTTTGAGAATGATGTATCTTTGCTTACTCTTCTTGACAGGTTTCCTATT-------CATGGAAATCGGGGAATTCTGGCATCTTTTCAGGCCACCTGTAGAACATCTGGCATTCGTTTA-GGAAAACGGGTTCATTAAAGAAACTATAATTTATTTGACTACTTTGGCACTCATGGGGATACACTTGGTTGTCAATACTCTGGGCAGA----TTTGTGGGTGGGTAATTCTATGAGTGAGCAAACAACAGGGAAGAAACTCTTTTG--GAAGAGCTTGTG--CTTTGAAGCCAGCCTGGATCAACACTGACAAGGCAGGGCTTGTCTCTTCTCCACAGT---GACCACAGATATCCATTCTGAGTTTATAATGATTGTGA-TTTTTT-------TTGTTTACCACAGCATTACATTTTTACTAAGCAGGTCACATGTGCCAATGCTTAA------TCACCA-GGCTACTAAAGAATAAAGCAAAACATGTAAAAGAGC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172425580 620 + 174210431 ATGCCAAGGTGAAAGTCTCATTTATTACAAAGCATGGACACATGAATCAGGAATTTTCAGTCAATACA-AACA-----TTTATTTTGATATAAA-AAATAATTGTTTCT--TGTGTGTGGCTGACAAAGAGTTAAAAAATCAGGAATGCAGGCAGGCTTTGAGAATGATGTATCTTTGCTTATTCTTCTTGACAGTTTTCCTATTTATTATTCATGGAAATTGGGGAATTCTGGCATCTTTTCAGGTCACCTGTAGAACATCTGGCATTCGTTTA-GGAAAACGGGTTCATTAAAGGAATTATAATTTATTTGACTACTTTGGCACTCATGGGGATACACTTGGTTGTCAATACTCTGGGCAGA----TTTGTGGGTGGGTAATTCTATGAGTGAGCAAACAACAGGGAAGAAACTCTTTTG--GAAGAGCTTGTG--CTTTGAAGCCAGCCTGGATCAATACTGACAAGGCAGGGCTTATCTCTTCTCCACAGT---GACCACAGATATCCATTCTGAGTTTATAATGATTGTGATTTTTTT-------TTGTTTACCACAGCATTACATCTTTACTAAGCAGGACACACGTGCCAATGCCTAA------TCACCAGGGCTACTAAACAATACAGCAAAACATGTAAAAGAGC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156291458 614 + 157873769 ATGCCAAGGGGAAAGTCTCATTTATTACACAGCATGGACACATGAATCAGGAATTTTCAGTCAATCTATTTCT-----TTTATTTTGATATAAA-AAATAATTGTTTCT--TGTGTGTGGCTGACAAAGAGTTAAAAAATCAGGAATGCAGGCAGGCTTTGAGAATGATGTATCTTTGCTTATTCTTCTTGACAGGTTTCCTATT----ATTCATGGAAATCGGGGAATTCTGGCATCTTTTCAGGCCACCTGTAGAACATCTGACATTCGTTTA-GGAAAACGGGTTCATTAAAGGAACTATAATTTATTTGACTACTTTGGCACTCATGGGGATACACTTGGTTGTCAATACTCTGGGCAGA----TTTGTGGGTGGGTAATTCTATGGGTGAGCAAACAACAGGGAAGAAACTCTTTTG--GAAGAGCCTGTG--CTTTGAAGCCAGCCTGGATCAATACTGACAAGGCAGGGCTTGTCTCTTCTCCACAGT---GACCACAGATATCCATTCTGAGTTTATAAT-ATTGTGA-TTTTTT-------TTGTTTACCACAGCATTACATTTTTACTAAGCAGGACACATGTGCCAATGCCTAA------TCACCA-GGCTACTAAAGAATAAAGCAAAACATGTAAAAGAGC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168108997 622 + 169853907 ATGCCAAGGTGAAAGTCTCATTTATTTCACAGCATGGAAACATAAATCAGGAATTTTCAGTCATTACA-AACATTTCTTTTATTTTGATATAAA-AAACAATTGTTTCTTGTGTGTGTGTCTGACAAAGAGTTAAAAAATCAGGAATGCAGGCGGGCTTTGAGAATGATGTATCTTTGCTTATTCTTCCTGACAGGTTTCCTATT----ATTCATGGAAATCAGGGAATTCTGGCATCTTTTCAGGCCACCTGTAGAACATCTGGCACTTATTTA-GGAAAACGGGTTCATTAAAGGAACTATAATTTATTTGTCTACTTTGGCACCCATGGGGAAACACTTGGTTGTCAATACTCTGGGCAGA----TGTGTGGGTGGGTGATTCTATGGGTGAGCAAACAACAGGGAAGAAACTCTTTTG--GAAGAGCCTGTG--CTTTGAAGGCAGCCTGGACCAATACTGACAAGGCAGGGCTTGTCTCTTCTCTGCAGT---GACCACGGGTATCCATTCTGAGTTTACAATGATTGTGAATTTTGT-------TTGTTTACCACAGCATTACATTTTTACTAAGCAGGACACATGTGCCAATCCCCGA------TCACCA-GGCTACCAAAGCATAAAGCAAAGCATGTGAAAGAGC i rheMac3.chr4 C 0 I 240 s macFas5.chr4 169064376 620 - 170955103 ATGCCAAGGTGAAAGTCTCATTTATTTCACAGCATGGAAACATAAATCAGGAATTTTCAGTCATTACA-AACATTTCTTTTATTTTGATATAAA-AAACAATTGTTTCT--TGTGTGTGTCTGACAAAGAGTTAAAAAATCAGGAATGCAGGCGGGCTTTGAGAATGATGTATCTTTGCTTATTCTTCCTGACAGGTTTCCTATT----ATTCATGGAAATCAGGGAATTCTGGCATCTTTTCAGGCCACCTGTAGAACATCTGGCACTTATTTA-GGAAAACGGGTTCATTAAAGGAACTATAATTTATTTGTCTACTTTGGCACCCATGGGGAAACACTTGGTTGTCAATACTCTGGGCAGA----TGTGTGGGTGGGTGATTCTATGGGTGAGCAAACAACAGGGAAGAAACTCTTTTG--GAAGAGCCTGTG--CTTTGAAGGCAGCCTGGACCAATACTGACAAGGCAGGGCTTGTCTCTTCTCTGCAGT---GACCACGGGTATCCATTCTGAGTTTACAATGATTGTGAATTTTGT-------TTGTTTACCACAGCATTACATTTTTACTAAGCAGGACACATGTGCCAATCCCCGA------TCACCA-GGCTACCAAAGCATAAAGCAAAGCATGTGAAAGAGC i macFas5.chr4 C 0 I 240 s papAnu2.chr4 163882649 619 + 165299245 atgccaaggtgaAAGTCTCATTTATTTCACAGCATGGAAACATAAATCAGGAATTTTCAGtcattaca-aacatttcttttattttgatataaa-aaa-aattgtttct--tgtgTGTGTCTGACAAAGAGTTAAAAAATCAGGAATGCAGGCGGGCTTTGAGAATGATGTATCTTTGCTTATTCTTCTTGACAGGTTTCCTATT----ATTCATGGAAATCAGGGAATTCTGGCATCTTTTCAGGCCACCTGTAGGACATCTGGCACTTGTTTA-GGAAAACGGGTTCATTAAAGGAACTATAATTTATTTGTCTACTTTGGCACCCACGGGGAAACACTTGGTTGTCAATACCCTGGGCAGA----TGTGTGGGTGGGTGATTCTATGGGCGAGCAAACAACAGGGAAGAAACTCTTTTG--GAAGAGCCTGTG--CTTTGAAGGCAGCCTGGACCAATACTGACAAGGCAGGGCTTGTCTCTTCTCTGCAGT---GACCACGGGTATCCATTCTGAGTTTATAACGAttgtgaattttgt-------ttgtttaccaCAGCATTACATTTTTACTAAGCAGGACACATGTGCCAATCCCCGA------TCAGCA-GGCTACCAAAGCATAAAGCAAAGCATGTGAAAGAGC i papAnu2.chr4 C 0 I 87 s chlSab2.chr13 96660114 620 + 98384682 ATGCCAAGGTGAAAGTCTCATTTATTACATGCCATGGAAACATAAATCAGGAATTTTCAGTCATTACA-AACATTTCTTTTATTTTGATATAAA-AAACGATTGTTTTT--TGTGTGTGTCTGACAAAGAGTTAAAAAATCAGGAATGCAGGCAGGCTTTGAGAATGATGTATCTTCGCTTATTCTTCTTGACAGGTTTCCTATT----ATTCATGGAAATCAGGGAATTCTGGCATCTTTTCAGGCCACCTGTAGAACATCTGGCACTTGTTTA-GGAAAACGGGTTCACTAAAGCAACTATAATTTATTTGTCTACTTTGGCACCCATGGGGAAACACTTGGTTGTCAATACTCTGGGCAGA----TGTGTGGGTGGGTAATTCTATGGGTGAGCAAACAACAGGGAAGAAACTCTTTTG--GAAGAACCTGTG--CTTTGAAGGCAGCCTGGACCAATACTGACAAGGCAGGGCTTGTCTCTTCTCTGCAGT---GACCACGGGTATCCATTCTGAGTTTATAACGATTGTGAATTTTGT-------TTGTTTACCACAGCATTACATTTTTACTAAGCAGGCCACATGTGCCAATCCCTGA------TCACCA-GGCTACCAAAGCATAAAGCAAAACATGTGAAAGAGC i chlSab2.chr13 C 0 I 69 s calJac3.chr4 169869008 600 + 171630274 AGGCCAAGATGAAAGCTTCATTTATTATACA-CATGGAAACATGAATCAGGAATTTTCAGTCGTTACA-AACATTTCTTTTATTTTGAGATAAC-AAGCGTTTTTTTGT---GTGTGTGGCTGACAGAGA---AAAAAATCAGGAATGCAGG-AGACTTTGAGAATGATGGATCTTTGCTTATTCTTCTTGACAGGTTTCCCATT----ATTTATGGAAATCGGGGGATTCTGGCATCTTTTCAGGCCACCTGAAGAACATCTGGCATTCGTTTA-GGAAAACGGGTTCGTTAAAGGAATGGTAATTTATTTGACTAC-TTGGCACTCCTGGGGAAACACTTGGTTGTTGATACCCTGGGCAGA----TTTCTGGTTGGGTGAGTCTTTGGGTGAGCAAACA----GGGAAACGCTCTTTTG--GAAAAGCCTGTG--CTTTTAAGGCAGCCTGGATCAACGCTGACAAGGCAGGGTTTACCTCTGCTTCTCCGT---GACCACAGATATGGATTCTGACTTTATAATGA-TGTGA-ATTTTC-------TTGTTTACCACAGAGTTACATTCCTACTAAGCAGGACACGTGTGCC------TAA------TCACCG-GGCTACCCAAGAATAAAGCAAA-CATGTAAAAGAGC i calJac3.chr4 C 0 C 0 s canFam3.chr1 56162710 618 + 122678785 ATGCCGAGAGCAAAGCCCCATTTATTCTACTACATAGAAATATCAGCCAGAAGTTGTCATCCATTACT-ACCATTTCTTTTATCTTGATATAAAGAAAGTAGGGCTTTT--------TAGTTGACAAAGAGTTAACAAG-CAGGAATGCTG-------------ATGATCTATCTTTGCTTATTCTCCTTGACGGCTTTCCTATT----ATTTATGGGAACCAGGGGACTGTGGCATTCTATCAGCCCACCTGTAAAACATCTGGCATTCATTTAGGGGGAGCTGGTTCATTAAGGGAGCTGTAATTTATTGGACTATTTTGGCATTGGTCAGGAAATACTCGGTTGTCAATATTCTGAGCAGACCGGTGTGTGGGTGCGTGACCCGATGGGTGTGCAAATAACA--GCAAACACTCTTTAGAAGAAGAGCCCGAGGCTTTAAAAGGAAGCCTGGCTCAGCACTGACCGCACGTGGA------CTTCTCTGTAGCGGGGACCAGAAATAACGGGTCTGAATTTGTATTAAGTGCCATTTTTTTTGTTTTGTTGTTTACGATATTGTTACATTCCTGCTAATCACGACGTGTCCACTAAAAACCAATCACAGTCACCA-ATCTATCAAAGAGCAAAGCAGAGTACAGGAAAGGTC i canFam3.chr1 I 1683 C 0 a score=1246191.000000 s hg38.chr6_KB021644v2_alt 93525 442 + 185823 CCTGGGGTCCTGAAGACCTGCCTCGA-AAATCAATGGTGCTGTTTAACTTTCCATCCTTAGAGACTGACAAAATGATTTTTGAAAATACTATCAGGATCCGATATTTCTGTCCTGTGTAAAAATGGGGTAGGAAGGGAAATAGCCAACAAAATTCCTAATAAAGAAAGGTGAAAACA-AGGTGACTTTCCCATTGCTCTTCTAAATTAGATCTTTACTTAGG-AAAAATGC---------------TTTTTTTTTTTTTTCTGCCATGGGGATTTAAAAAAAAAAC----TGCTAATTTCATGACAGGAAATTTCTGAGAGTAAAATGTAGACTACAAGATACATTCAC-TTTTTTTCAGTGTAGCTCAACAGCACATGGGTCAGGCCCCAAAAGAAACATATTTTACCCACAATGCTTTATGATTGACAAGGAATTATAGACTTCTC-TTTTTCATTTCTGATTA s panTro4.chr6 170676996 444 + 172623881 CCTGGGGTCCTGAAGACCTGCCTCGA-AAATCAATGGTGCTGTTTAACTTTCCATCCTTAGAGACTAACAAAATGATTTTTGAAAATACTATCAAGATCCGATATTTCTGTCCTGTGTAAAAATGGGGTAGGAAGAGAAATAGCCAACAAACTTCCTAATAAAGAAAGGTGAAAACA-AGGTGACTTTCCCATTGCTCTTCTAAATTAGATCTTTACTTAGG-AAAAACGC---------------TTTTTTTTTTTT--CTGCCATGGGGATTTAAAAAAAAAACAAACTGGTAATTTCATGACAGGAAATTTCTGAGAGTAAAATATAGACAACAAGATACATTCAC-TTTTTTTCAGTGTAGCTCAACAGCACATGGGTCAGGCCCCAAAAGAAATATATTTTACCCACAATGCTTTATGATTGACAAGGAATTATGGACTTCTC-TTTTTCATTTCTGATTA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172426200 439 + 174210431 CCTGGGGTCCTGAAGACCTGCCTCGA-AAATCAATGGTGCTGTTTAACTTTCCATCCTTAGAGACTGACAAAATGATTTTTGAAAATACTGTCAGGATCTGAGATTTCTGTCCTGTGTAAAAATGGGGTAGGAAGAGAAATAGCCAACAAACTTCCTAATAAACAAAGGTGAAAACA-AGGCGACTTTCCCATTGCTCTTCTAAATTAGATCTTTACTTAGG-AAAAATGC---------------TTTTTTTTTT----CTGCCATGGGGATTAAAAAAAAAAAA---CTGCTAATTTCATGACAGGAAATTTCTGAGAGTAAAATATAGACTACAAGATACATTTAC-TTTTTTTCAGTGTGGCTCAACCGTACATGGGTCAGGCCCCAAAAGAAATATATTTTACCCACTCTGCTTTATGATTGACAAGGAATTATGGACTTCTC-TTTTTCATTTCTGATTA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156292072 436 + 157873769 CCCGGGGTCCTGAAGTCCCGCCTCGA-AAATCAATGGTGCTGTTTAACTTTCCATCCTTAGAGACTGACAAAATGATTTTTGAAAATACTGTCAGGATCTGAGATTTCTGTCCTGTGTAAAAATGGGGTAGGAAGAGAAATAGCCAACAAACTTCCTAATAAAGGAAGGTGAAAACA-AGGTGACTTTCCCATTGCTCTTCTAAATTAGATCTTTACTTAGG--AAAATGC---------------TTTTTTTTTTT---CTGCCATGGGGATTTAAAAAAAA------CTGCTAATTTCATGATAGGAAATTTCTGAGAGTAAAATATAGACTGCAAGATACATTCAC-TTTTTTTCAGTGTAGCTCAACAGCACGTGGGTCAGGCCCCAAAAGAAATATATTTTACCCACAATGCTTTCTGATTGACAAGGAATTATGGACTTCTC-TTTCTCATTTCTGATTA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168109859 434 + 169853907 CCTGGGGCCCTGAAGACCTGCCTCAA-AAATCAATGGTGCTGCTTAACTTTCCATCCTTAGAGACTGACAAAATGATTTTTGAAAATACTGTCAAGATCTGGGATTTCTGTCCTATGTAAAAAGGGGGTAGGAGGAGAAATAGCCAACAAGCTTCCTAATAAACAAAGGTTAAAACA-AGGTGATTTTCCCATTGCTCTTCTAAATCAGAT-----CTTAGG-AAAAACGC---------------TTTTTTTTTTTT--TTGCTATGGGGATTTAAAAAAAA------CTGTTAATTTCATGACAGGAAATTTCTGAGAGTAAAATATAGACTATAAGATACATTCAC-TTTTTTTCAGTGTGGCTCAACAGTACATGGGTCAGGACCCAAAAGAAATCCATTTTACCCACAATGCTTTATGATTGACAAGGAATTATGGACTTCTCTTTTTTCATTTCTGATTA i rheMac3.chr4 I 240 C 0 s macFas5.chr4 169065236 435 - 170955103 CCTGGGGCCCTGAAGACCTGCCTCAA-AAATCAATGGTGCTGCTTAACTTTCCATCCTTAGAGACTGACAAAATGATTTTTGAAAATACTGTCAAGATCTGGGATTTCTGTCCTATGTAAAAAGGGGGTAGGAGGAGAAATAGCCAACAAGCTTCCTAATAAACAAAGGTTAAAACA-AGGTGATTTTCCCATTGCTCTTCTAAATCAGAT-----CTTAGG-AAAAACGC--------------TTTTTTTTTTTTT--TTGCTATGGGGATTTAAAAAAAA------CTGTTAATTTCATGACAGGAAATTTCTGAGAGTAAAATATAGACTATAAGATACATTCAC-TTTTTTTCAGTGTGGCTCAACAGTACATGGGTCAGGACCCAAAAGAAATCTATTTTACCCACAATGCTTTATGATTGACAAGGAATTATGGACTTCTCTTTTTTCATTTCTGATTA i macFas5.chr4 I 240 C 0 s papAnu2.chr4 163883355 442 + 165299245 CCTGGGACCCTGAAGACCTGCCTTGA-AAATCAATGGTGCTGCTTAACTTTCCATCCTTAGAGACTGACAAAATGATTTTGGAAAACACTGTCAAGATCTGGGATTTCTGTCCTATGTAAAAA-GGGGTAGGAGGAGAAATAGCCAACAAGCTTCCTAATAAACAAAGGTTAAAACA-AGGTGATTTTCCCATTGCTCTTCTAAATCAGATCTTTACTtagg-aaaaatgt---------tttgttttgttttgtttt--ttgccatggGGATTT---AAAAA------CTGTTAATTTCATGACAGGAAATTTCTGAGAGTAAAATATAGACTATAAGatacattcacttttttttcagtGTGGCTCAACAGTACTTGGGTCAGGACccaaaagaaatctattttacCCACAATGCTTTATGATTGACAAGGAACTATGgacttctcttttttcatttctgatta i papAnu2.chr4 I 87 C 0 s chlSab2.chr13 96660803 451 + 98384682 CCTGGGACCCTGAAGACCTGCCTCGA-AAATCAATGGTGCTGCTTAACTTTCCATCCTTAGAGACTGACAAAATGATTTTTGAAAATACTGTCAAGATTTGGGATTTCTGTCCTATGTAAAAAGGGGGTAGGAGGAGAAATAGCCAACAAGCTTCCTAATAAACAAAGGTTAAAACA-AGGTGACTTTCCCATTGCTCTTCTAAATCAGACCTTTACTTAGG-AAAAAtgttttgttttgtttgttttgttttgtttt--TTGCCATGGGGATTT---AAAAA------CTCTTAATTTCATGACAGGAAATTTCTGAGAGTAAAATATAGACTATAAGATACATTCAC-TTTTTTTCAGTGTGGCTCAACAGTACCTGGGTCAGGACCCAAAAGAAATCTATTTTACCCACAATGCTTTATGATTGACAAGGAATTATGGACTTCTCTTTTTTCATTTCTGATTA i chlSab2.chr13 I 69 C 0 s calJac3.chr4 169869608 429 + 171630274 CTCAGGGTCCT-AAGACCTGCCTCAA-AAATCAATAGGGCTGTTTAGCTTCCTACCCTTAGAGACGGACAAAATGGTTTCTGAAAACACTGTCAAGATCTGAGATTTCTGTCACACGTAAAAATGGGGTGGGAAGAGAAATAGCCAAAAAACATCCCGATAAAGAGAGGTGAATCCA-AGGTGACTTTCCCATTGTTTTTCTAAATCAGATCTTTACCTAGAAAAAAATGC---------------ACTTTTT-------TTGCCATGGGGATTTAAAGAAAC---------TTAATTTCATGATAGGACATTTCTGAGGGCAAAATATAGACCACAAGATAGATTCAT-GTTTTTCCAATGTGGCTCCACAGTACACAGGTCAGGCCCCAAAAGAAA--TAGTTTACCCACAATGCTTTATGATTGACAAGGGATTATGGACCTCTCTTTCTTCATTTCCAATTA i calJac3.chr4 C 0 C 0 s canFam3.chr1 56163328 400 + 122678785 CTCAGGATCCTGAGAGCATGCCTAAAGGGATGGATCATACTA--GAATTTGTCCTCCCTGCAGG-TGACGGGA-GGCCCGTGGCGAAGCTGTCAGGAACCGACA-TCCCGTCGTATGTAACGATGAGACCGCAGGA-AGGTAACTGAGACTCTTCCCAACAAAGAAAGTTCACGACACAGGTGACTTTCCCATTGCAATTCCAAGTCGGACCCTTGCACGAG-GAAAGCAC---------------ATTTT---------GTGTCCCGGGGACTGGGAGCACC------ATGGGGATGTCATGACCAGGATTTACTGCCAAT-AAATGTGGGCTATGAGCCGGATTCG--GCTTTTCCAATAGGATAAAATGGTGCAT-GGTCGGGGCCCACAGAAAG--TATTTTACCTGCAGAG------------CAGGGGCTTGTGGATTTGCT-TTTTTGA---------- i canFam3.chr1 C 0 C 0 a score=598248.000000 s hg38.chr6_KB021644v2_alt 93967 234 + 185823 CATAGATAAAAACAAAATTTGACCGAGATCTTTGATGATAATATCCAACATGTGAGAAGATATTTTCTATAATTGCCATACATGAACTCGAGAA-TTTTGCCAGAATTTTGAATAATGTACCCAAG-------AATCTGTTAAAAGTTGCCTTCCTACAACTCTAAGGAAGAGAAGGTTTTCCATATCTGGGTTTCTAAGAACT--AAATAATTACCTGGAAATTTTGGTTGAAGATAAGCGCC s panTro4.chr6 170677440 234 + 172623881 CATAGATAAAAACAAAATTTGACCGAGATCTTTGATGATAATATCCAACATGTGAGAAGATATTTTCTATAATTGCCATACATGAACTCGAGAA-TTTTGCCAGAATTTTGAATAATGTACCCAAG-------ACTCTGTTAAAAGTTGCCTTCCTACAACTCTAAGGAAGAGAAGGTTTTCCATATCTGGGTTTCTAAGAACT--AAATAATTACCTGGAAATTCTGGTTGAAGATAAGCGCC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172426639 234 + 174210431 CATAGATAAAAACAAAAATTGACCGAGATCTTTGATGATAATATCCAACATGTGAGAAGATATTTTCTATAATTGCCATACGTGAACTCAAGAA-TTTTCCCAGAATTTTGAATAATGTACCCAAG-------AATCTGTTAAAAGTTGCCTTCCTACAACTGTAAGGAAGAGAAGGTTTTCCATATCTGGGTTTCTAAGAACT--AAATAATTACCTGGAAATTTTGGTTGAAGATAAGTGCC i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168110293 231 + 169853907 CATAGATAAAAACAAGATTTGACTGAGATCTTTGATGATAATATCCAACATGTGAGAAAATATTTTCTATAATTGCCGTACATGAACTC---AA-TTTTGCCACAATTTTGAATAATGTACCCAAG-------AATCTCTTAAAAGTTGCCTTCCTACAACTCTAAGAAAGAGAAGGTTTTCCATATCTGGGTTTCTAAGAACT--AAATTATTACCTGGGAATTTCGGTTGAAGATAAGCGCC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169065671 231 - 170955103 CATAGATAAAAACAAGATTTGACTGAGATCTTTGATGATAATATCCAACATGTGAGAAAATATTTTCTATAATTGCCGTACATGAACTC---AA-TTTTGCCACAATTTTGAATAATGTACCCAAG-------AATCTCTTAAAAGTTGCCTTCCTACAACTCTAAGAAAGAGAAGGTTTTCCATATCTGGGTTTCTAAGAACT--AAATTATTACCTGGGAATTTCGGTTGAAGATAAGCGCC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163883797 234 + 165299245 catagataaaaacaaaatttgactgAGATCTTTGATGATAATATCCaacatgtgagaaaatattttctataattgcCGTACATGAACTCAAGAA-TTTTGCCACAATTTTGAATAATGTACCCAAG-------AATCTCTTAAAAGTTGCCTTCCTACAACTCTAAGGAAGAGAAGGTTTTCCATATCTGAGTTTCTAAGAACT--CAATAATTACCTGGGAATTTCGGTTGAAGATAAGTGCC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96661254 232 + 98384682 CATAGATAAAAACAAAATTTGACTGAGATCTTTGATGATAATATCCAACATGTGAGAAAATATTTTCTATAATTGCCATACATTAACTC---AATTTTTGCCACAATTTTGAATAATGTACCCAAG-------AATCTCTTAAAAATTGCCTTCCTACAACTCTAAGGAAGAGAAGGTTTTCCATATCTGGGTTTCTAAGAACT--CAATAATTACCTGGGAATTTCGGTTGAAGATAAGCGCC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169870037 234 + 171630274 CACAGATAAAAACACAGTCTGACCAAGATCTTTGATGATGATATTCAACGTGTGAGGAAACGCTTTCCAGAACTGCCATACGTGAACTCAAGAA-TTTTGCCAGAAGTTTGAATAATGTTCCCAAG-------AACCTCTTAAAAGTTGCTGTCGTACGACTGTAAGGAAGGGAGGGTTTTCCATATCTGAGTTTCTAAGAACA--GAATAATTACCTGGGAATTTTGGTTGAAGATAAGTACC i calJac3.chr4 C 0 C 0 s canFam3.chr1 56163728 220 + 122678785 ---AGATAAAAATAAAATCCAATGGAGATCTT---CGATAATTTCCAACATGTAGGATAATATTTCCTGTAATTGCCATG------------AA-TG----CAAAATTTTGAGTGATTCACCCAGGAGCTGAAAACCTCATAAAAGTTGCCTTTCTCCATCTGTGAG-AAGAGAGAGCTTTCCATCTCCAAGTCTCTAAGAACTGAGAACAGTTCTCCGGGAATGCTGGTCAAAGGGAAGGGCC i canFam3.chr1 C 0 I 43 e nomLeu3.chr3 156292508 0 + 157873769 C a score=1671194.000000 s hg38.chr6_KB021644v2_alt 94201 795 + 185823 TTGTCTTACAAATGAGAAGGAAAAGAGA-------------------------------------TGTTACCTAAATATC-------TTAAATATAATATATTAAAAAATAGAAGCTGTGTATACAAAAGTTTTAAGTCAAGCAGATATTTGACACTTCTCTTGTGAA-TTTTTTGCTTTAGGCAACCTAACTGGAAAATTTCTGAAGGAAAACATGAATTTTGGTGAAAAATTATCTGATTATTCCACCCCTATTAATCCAATTAATCAAAACATTGAAGAAGAAAATTGTCCTCACGTTCCACTGGGTTGACAGCCTAGATGGTGGTATTCTGtgtga----cgtcaa------gtttagcctaaagctgcctccttacatattttagggtcagcctgaagacctctccacacttagtgactgtcacctaactgggcgtgccaacagacctaacccacccttgccccaagcagccgcatctcagcggatcacagcagccaggcgtcaccatgcaccgtgg-cccggttcaaactgtgtttaaatgaggcccacgccaagcggtgcccg-tctggctgtttctgtgcctccgtccagttttcttg-gcatcactgtcctttctctgtccacaaatctaaccggaccacgcgacagcgacggagccgccctgagcctatgctgggtccagggctgccccattcaccaacagtcatttgctcaatgaagctctgtgacattcagtttgtctgaagtttgtcttttaacaTTGGTGATAGAGTGAGAAGT-CTGTGAGGAGAAGGGATATGAGATGTTCCAAAAT------ATTATTACATCACAAGCAAACGGATTTCTGA s panTro4.chr6 170677674 805 + 172623881 TTGTCTTACAAATGAGAAGGAAAAGAGA---------------------------------GAGATGTTACCtaaatatc-------ttaaatataatatattaaaaaataGAAGCTGTGTATACAAAAGTTTTAAGTCAAGCAGATATTTGACACTTCTCTTGTGAA-TTTTTTGCTTTAGGCAAACTAACTGGAAAATTTCTGAAGGAAAACATGAATTTTGGTTAAAAATTATCTGATTATTCCACCCCTATTAATCCAATTAATCAAAACATTGAAGAAGAAAATTTTCCTCACGTTCCACTGGGTTGACAGCCTAGATGGTGGTATTCTGtgtga----ggtcaa------gtttagcctaaagctgcctccttacatattttagggtcagcctgaagacctctccacacttagtgactgtcacctaactgagcgtatcaacagacttaacccacccttgccccaagcagccgcatctcagcggatcacagcagccaggcgtcaccatgcaccgtgg-cccggttcaaactgtgtttaaatgaggcccacgccaagcggtgcccg-tctggctgtttctgtgcctccgtccagttttcctg-gcatcgctgtcctttctctgtccacaaatcttaccggaccacgcgacagtgacggagccgccctgagcctatgctgggtccagggctgccccattcaccaatagtcatttgctcaatgaagctctgtgacattcagtttgtctgaagtttgtcttttaacaTTGGTGATAGAGTGAGAAGT-CTGTGAGGAGAAGGGATATGAGATGTTCCAAAATTACATCAAAATTACATCACAAGCAAACGGATTTCTGA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172426873 811 + 174210431 TTGTCTTACAAATGAGAAGGAAAAGAGA-----------------------------GAGAGAGATGGTACCtaaatatc-------ttaaatataatatattaaaaaataGAAGCTGTGTATACAAAAGTTTTAAGTCAAGCAGATATTTGACACTGCTCTTGTGAA-TTTTTTGCTTTAGGCAAACTAACTGGAAAATTTCTGAAGGAAAACATGAATTTTGGTTTAAAATTATCTGATTATTCTACCCCTATTAATCCAATTAATCAAAAACTTGAAGAAGAAAATTTTCCCCATGTTACACTGGGTTGACAGCCTAGGTGGTGGTATTCTGtgtga----cgtcaa------gtttagcctaaagctgtctccttacatattttagggtgagcctgaaggcctctccacacttagtgactgtcacctaaccgggcgtggcaacagacttaacccacccttgccccaagcagccgcatctcagcggatcacagcagccgggcgtcaccatgcaccgtggcccctattcaaactgtgtttaaatgaggcccacgccaagcggtgcccg-tctggctgtttctgtgcctccgtccagtttttctg-gcatcactatcctttctctgtccacaaatcttactgaaccacgcgacagcgatggagctgccctcagcctatgctgggtccagggctgccccattcatgaatagtcatttgctcagtgaagttctgtgacattcagtttgtctgaagtttgtcttttaacaTTGGTGATAGAGTGAGAAGCACTGTGAGGAGAAGGGATATGAGATGTTCCAAAATTACGTCAAAATTACATCACAAGCAAACGGATTTCTGA i ponAbe2.chr6 C 0 I 312 s rheMac3.chr4 168110524 808 + 169853907 CTGTCTTACGAATGAGAAAGAAAAGAGA---------------------------GAGAGAGATATGttatttaaatatcttaaaaattaaatataatgtattaaaaaataGAAGCTGGGTATACAAAAGTTTTAAGTCAAGCAGATATTTGACACTTCTCTTGTGAA-TTTTTTGCTTTAGGCAACCTAAATGGAAAACTTCTGAAGGAAAACATGAATTTTGGTTAAAAATTATCTGATTATTCTACCCCTATTAATCCAATTAATCAAAAAATTGAAGGAGAAAATTTTCCCCACGTTCCACTGGATTCACAGCCCAGACGGTGGTATTCTGtgtga----ggttaa------gtttagccgaaagctgcctccttatatattttagggtcagcctgaaggcctctccacacttagtgactgtcacctaactgggtgtgtgaacacacttaacccacccttgccccaaacagcagcatctcagcggatcacagcagcagggagtcaccatgcaccgtggccccggttcacatcatgtggaagtggggcccacgccaagcggtgcccc-tctggctgtttctgcttctctgtccagtttt-ctg-ccatcactgtcctttctctgtccacaaatcttaccggaccacgtggcagcgacggagtcaccctgaacctatgctgggtccagggctgcccggttcacgaatagttatttgctcagtgaagctctgtgacattcggtttgtctgacgtttgtcttttaacaTCGGTGATAGAGAGAGAAGTACTGTGAGGAGAAGGGGTGTGAGATGTTCCAAAAT-----------GACATCAAGAGCAAATGGATTTCTGA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169065902 808 - 170955103 CTGTCTTACGAATGAGAAAGAAAAGAGA---------------------------GAGAGAGATATGTTATTTAAATATCTTAAAAATTAAATATAATGTATTAAAAAATAGAAGCTGGGTATACAAAAGTTTTAAGTCAAGCAGATATTTGACACTTCTCTTGTGAA-TTTTTTGCTTTAGGCAACCTAAATGGAAAACTTCTGAAGGAAAACATGAATTTTGGTTAAAAATTATCTGATTATTCTACCCCTATTAATCCAATTAATCAAAAAATTGAAGGAGAAAATTTTCCCCACGTTCCACTGGATTCACAGCCTAGACGGTGGTATTCTGtgtga----ggttaa------gtttagccgaaagctgcctccttatatattttagggtcagcctgaaggcctctccacacttagtgactgtcacctaactgggtgtgtgaacacacttaacccacccttgccccaaacagcagcatctcagcggatcagagcagcggggagtcaccatgcaccgtggccccggttcacatcatgtggaagtggggcccacgccaagcggtgcccc-tctggctgtttctgcgcctctgtccagtttt-ctg-ccatcactgtcctttctctgtccacaaatcttaccggaccacgtggcagcgacggagtcaccctgaacctatgctgggtccagggctgcccggttcacgaatagttatttgctcagtgaagctctgtgacattcggtttgtctgacgtttgtcttttaacaTCGGTGATAGAGAGAGAAGTACTGTGAGGAGAAGGGGTGTGAGATGTTCCAAAAT-----------GACATCAAGAGCAAATGGATTTCTGA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163884031 808 + 165299245 CTGTCTTacgaatgagaaagaaaagaga---------------------------gagagagatatgttatttaaatatcttaaaaattaaatacaatgtattaaaaaatagaagCTGGGTATACAAAAGTTTTAAGTCAAGCAGATATTTGACATTTCTCTTGTGAA-TTTTTTGCTTTAGGCAACCAAAATGGAAAACTTCTGAAGGAAAACATGAATTTTGGTTAAAAATCATCTGATTATTCTACCCCTATTAATCCAATTAATCAAAAAATTGAAGGAGAAAATTTTCCCCAGGTTCCACTGGGTTGACAGCCCAGACGGTGGTATTCTGTGTGA----CGTTAG------GTTTAGCcgaaagctgcctccttacatattttagggTCAGCCTGAAGGCCTCTCCACACTTAGTGACTGTCACCTAACCGGGTGTGTGAACACACTTAACCCACCCGTGCCCCAAACAGCCGCATCTCAGCGGATCACAGCAGCGGGGAGTCACCACGCACCGTGGCCCCGGTTCACATCATGTGGAAGTAGGGCCCACGCCAAGCGGTGCCCC-TCTGGCTGTTTCTGCGCCTCTGTCCAGTTTT-CTG-CCATCACTGTCCTTTCTCTGTCCACAAATCTTACCGGACCACGTGGCAGCGACGGAGTCACCCTGAACCTATGCTGGGTCCAGGGCTGCCCAGTTCATGAATAGTTATTTGCTCAGTGAAGCTCTGTGACATTCGGTTTGTCTGACGTTTGTCTTTTAACattggtgatagagtgagaagTACTGTGAGGAGAAGGGGTGTGAGATGTTCCAAAAT-----------GACATCACCAGCAAATGGATTTCTGA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96661486 810 + 98384682 CTTTCTTACGAATGAGAAAGAAAAGAGA---------------------------GCGAGAGATATGTTATTTAAATATCTTAAAAATTAAATATAATGTATTAAAAAATAGAAGCTGGGTATATGAAAGTTTTAAGTCAAGCAGATATTTGACACTTCTCTTGTGAATTTTTTTGCTTTAGGCAACCTAAATGGAAAACTTCTGAAGGAAAACATGAATTTTGGTTAAAAATTATCTGATTATTCTACCCCTATTAATCCAATTAATCAAAAAATTGAAGGAGAAAATTTTCCCCACGTTCCACTGGATTCACAGCCCAGACGGTGGTGTTCTGCGTGA----CGttaa------gtttagccgaaagctgcctccttacatattttagggtcagcctgaaggcctctccacacttagtgactgttacctaactgggtgtgtgaacacacttaacccacccttgccccaagcagccgcatctcagcggatcacagcagcgaggagtcaccatgcaccgtggccccggttcacatcatgtggaagtggggcccatgccaagtggtgccccgtctggctgtttctgcgcctctgtccagtttt-ctg-ccatcactgtcctttctctgtccacaaatcttaccggaccacgtggcagtgacagagtcaccctgaacctatgctgggcccagggctgccccgttcacgaatagttatttgctcagtgaagctctgtgacattcggtttgtctgacatttgtcttttaacaTTGGTGATAGAGTGAGAAGTACTGTGAGGAGAAGGGCTGTGAGATGTTCCAAAAT-----------GACATCACGAGCAAATGGATTGCTGA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169870271 816 + 171630274 TTGTTTTACAAATGAGAAGGAagagagaggagagagggggagaggaagagagagagagagagagagGTTA-------------AAAATTAAACA-----TACTAAAAAGTAGGAGCTGAGTGTACGGAAGTTTTCAGTCAAGTAGATATTTGACATTTCTCTTGTGAA-TTGTTTGCTTTAGGCAACAAAAGTGGAAAATATCTGAAGGAAAACATAAATTTTGTTTAAAAGTTATCTGATTATTCTACCTCTATTAATGCAACTAATCACAAAGTTGAAAAAGGACACTTGCC-CACG-TCCACTGG-CTGACGGCCTAAATGGTGGTATCCTGTGTGACCACCGTTTATAGGCCgttcagcct-cagctgcctcctgacacatttcggggccgacctgaaggcctctccacacgcagggactgtggcctaaccgggcgtgtgaacag----aacccacccttgccct-agcagctgaatctcagcggatcacagcagccagtggtcaccacgcaccgtgg-cctggttcacaccatgtttcaatgaggcccacaccacgcagtgcctg-tccggctgcttctgtgcctccatacagtttt-ctgtgcatcactgtcctttctctatccacaaatctgactggaccacgcagcagccacgaagccaccctgagcctgtgctgggtcc-tggctgccctggtcacaaacatttatgtgtc--atgaagctctgtggcattcagtttgtctgaagtttgtcttttaccaTTGGTGATAGAGTGAGACATACAGT---GAGAAGGGGTAGGAGATG-TCCAAAATCACATCAAAATTACATCACAAGC------ATTTCTGA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56163948 43 + 122678785 I e nomLeu3.chr3 156292508 0 + 157873769 C a score=610299.000000 s hg38.chr6_KB021644v2_alt 94996 302 + 185823 GTAAGAGGATGGTTGGGGCAGGGTCAGGTGGGCCGCACTGGGTGAGTGTCTGGTgaggatgggggaataggtggggcgggggcagagaggaggaggcaggatggaggagagggagaaagaggaagggggagccagcagcagggagaggggagacaggaTTGTATACAGAA-ATGGAACAAAGCCACCAGCTTCTGCACTCTCCAGTGTGCCCAGGACCTGCCCGCTCCGAGTGGACCC-GACAGCACGGGGGTGGCCTGACGCCGGCTGAGATGCAGAATCAGGCCTCTGAGCTACTGAGCTGG s panTro4.chr6 170678479 302 + 172623881 GTAAGAGGATGGTTGGGGCAGGGTCAGGTGGGCCGCGCTGGGTGAGTGTCTGGTgaggatgggggaataggtggggcgggggcagagaggaggaggcaggatggaggagagggagaaagaggaagggggagccagcagcagggagaggggagacaggaTTGTATACAGAA-ATGGAACAAAGCCACCCGCTTCCGCACTGTCCACTGTGCCCGGGACCTGCCCGCTCCGAGTGGACCC-GACGGCACGGGGGTGGCCTGACGCCGGCTGAGATGCAGAATCAGGCCTCTGAGCTACTGAGCTGG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172427996 301 + 174210431 GTAAGAGGATGGTTGGGGCAGGGGCAGGTGGGCCGCACTGGGTGAGCGTCTGGTGAGGATGGGGGACTAGGTGGGGCGGCGGCAGAgaggaggaggcaggatggaggagagggagaaagaggaa-gaggagACAGCAGCAGGGAGAGGGGAGACAGGATCGTATACAGAA-ATGGAACAAAGCCACCAGCTTCCGCACCCTCCACTGTGCCCAGGACCTGCCCGCTCCGAGTGGACCC-GACAGCACGGGGGTGGCCTGACGCCGGCTGAGATGCAGAATCAGGCCTCTGAGCTACTGAGCTGG i ponAbe2.chr6 I 312 C 0 s rheMac3.chr4 168111332 302 + 169853907 GGAAGGGGATGGTTGGGGCAGCGTCAGGTGGGCCGGACTGGGTGAGTGTCCTGTGAGGATGGGGGGATAGGTGGGGCGGGGGCCGAgaggaggaggcaggatggaggagagagagaaagaggaaggaggagCCTGCAGAAGGGAGAGGGGAGACGGTGTTGCATACAGAA-ATGGAGCACAGCCACCCGCTTCCACACTCTCCACCGTGCCCAGGACCGGACCGCTCCGAGTGGACCCGGGCAGCTCTAGGGTGGCCTGGC-CCGGCTGAGATGCAGAATCAGGCCTCTGAACCACTGAGCTGT i rheMac3.chr4 C 0 I 1104 s macFas5.chr4 169066710 302 - 170955103 GGAAGGGGATGGTTGGGGCAGCGTCAGGTGGGCCGGACTGGGTGAGTGTCCTGTgaggatggggggataggtggggcgggggccgagaggaggaggcaggatggaggagagagagaaagaggaaggaggagcctgcagaagggagaggggagacggTGTTGCATACAGAA-ATGGAGCACAGCCACCCGCTTCCACACTCTCCACCGTGCCCAGGACCGGACCGCTCCGAGTGGACCCGGGCAGCACTAGGGTGGCCTGGC-CCGGCTGAGATGCAGAATCAGGCCTCTGAACCACTGAGCTGT i macFas5.chr4 C 0 I 650 s papAnu2.chr4 163884839 303 + 165299245 GGAAGGGGATGGTTGGGGCAGCGTCAGGTGGGCCGGACTGGGTGAGAGTCCGGTgaggatgggggaataggtggggtgggggtggaaaggaggaggcaggatggaggagagagagaaagacgaaggaggagcctgcagaagggagaggggagaCGGTGTTGCATACAGAA-ATGGAACAAAGCCACCTGCTTCTGCGTTCTCCACCGTGCCCAGGACCGGACCGCTCCGAGTGAACCCGGGCAGCACCAGGGCGGCCTGGCGCCGGCTGAGAGGCAGAATCAGGCCTCTGAGCCACTGAGCtga i papAnu2.chr4 C 0 I 673 s chlSab2.chr13 96662296 303 + 98384682 GGAAGAGGATGGTTGGGGCAGCGTCAGGTGGGCCGGACTGGGTGAGTGTCCGGTgaggatgggggaataggaggggcaggggcggagaggaggaggcaggagggaggagagagagaaagaggaaggaggagCCTGCAGAAGGGAGAGGGGCGACGGTGTTGCATACAGAA-ATGGAGCACAGCCACCCGCTTCCGCGCTCTCCACCGTGCCCAGGACCGGAACGCTCCCAGTGGACCTGGGCAGCACCAGGGTGGCCTGGCGCCGGCTGAGATGCAGAATGAGGCCTCTGAGCTACTGAGCTGC i chlSab2.chr13 C 0 I 674 s calJac3.chr4 169871087 277 + 171630274 -GTGAGGAACAGTAGGGGCAGTATCAGGTGGGACAGACGGGGTGAGTGCATGATCAGGATGGGGGAATAGGTGGGGCGGGGGCAGAGAGGAGGAAGAAGA-------------------------GGGGAGCCAGCAGCAGGGAGAGGGGAGCCAGCACTGAATACAAAACATGAAAGAAAACCACCAGCTTCCGCACTCTCCCCTGTGCCCGGGACCTGACTGCTCTGAGGGGACCC-GGATGCGCTGTGGTGGCCTGACACTGGCTgagatgcagaatcaggcccaagggcttctgagctgg i calJac3.chr4 C 0 C 0 e canFam3.chr1 56163948 43 + 122678785 I e nomLeu3.chr3 156292508 0 + 157873769 C a score=442736.000000 s hg38.chr6_KB021644v2_alt 95298 234 + 185823 AATCTGCCTTTTGGCCGGACCCGGTTGATT-GGAACCGCGTTCATTTGAGGAATGCT-CCCTGCGACCAGAGCTCCACCAGGACACTCCTTCCCTCCGCCGGCCACGTTTGCAGGGAGCCCCTGAGAGGCAGCGGCAGCCCGGATGCTGAATCCCATTCGCCCCGGTCATTTCCGGAGCGTCTTCCAGCCCGTTCCCCGCCATGACAGCGACGTGTGCTTTGAGCTCAGTCCACAG s panTro4.chr6 170678781 234 + 172623881 AATCTGCCTTTTGGCCGGACCCGGTTGATT-GGAACCGCGTTCATTTGAGGAATGCT-CCCTGCGACCAGAGCTCCACCAGGACACTCCTTCCCTCCGCCGGCCACGTTTGCAGGGAGCCCCTGAGAGGCAGCGGCAGCCCGGATGCTGAATCCCATTCGCCCCGGTCATTTCCGGAGCGTCTTCCGGCCCGTTCCCCGCCATGACAGCGACGTGTGCTTTGAGCTCAGTCCACAG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172428297 233 + 174210431 AATCTGCCTTTTGGCCGGACCCGGCTGATT-GGAACCGCGTTCATTTGAGGAATGCT-CCCGGCGACCAGAGCTCCACCAGGACACTCCTTCCCTCCGCCCGCCACGTGTGCAGGGAGCCCCTGAGAGGCAGCGGCAGCCGGGATGCTGAGTCCCATTCG-CCTGGTCATCTCCGGCGCGTCTTCCAGCCCGTGCCCCACCATGACAGCGACGTGTGCTTTGAGCTGAGTCCACAG i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168112738 214 + 169853907 AATCTGCCTTTTGGCTGGACCCAGTTGATT-GGAACCGCGTTCATTTGAGGAAGGCT-CCCTGTGACCAGAGCTCCCCCAGGACACTCCATCCCCCCGCCAGCCACGTCTGCAGGGAGTCCCTGAGAGGCAGCAGCAGCCTGGATGCTGAATCCCATTCGC-----------CCGGAGCGTCTTCCAGCCCGTTCCCCGCCGT---------GTGTGCTTTGAGCCGAGTCCACAG i rheMac3.chr4 I 1104 C 0 s macFas5.chr4 169067662 214 - 170955103 AATCTGCCTTTTGGCTGGACCCAGTTGATT-GGAACCGCGTTCATTTGAGGAAGGCT-CCCTGCGACCAGAGCTCCCCCAGGACACTCCATCCCCCCGCCAGCCACGTCTGCAGGGAGTCCCTGAGAGGCAGCAGCAGCCTGGATGCTGAATCCCATTCGC-----------CCGGAGCGTCTTCCAGCCCGTTCCCCGCCGT---------GTGTGCTTTGAGCCGAGTCCACAG i macFas5.chr4 I 650 C 0 s papAnu2.chr4 163885815 226 + 165299245 AATCTGCCTTTTGGCTGGACCTGGTTGATT-GGAAACGTGTTCATTTGAGGAAGGCTCCCCTGCGACCAGAGCTCCCCCAGGACACTCCATCCCCCCGCCAGCCACGTCTGCAGGGAGCCCCTGAGAGGCAGCGGCAGCCTGGATGCTGAATCCCATTCGCCTACGTCATCTCCAGAGCGTCTTCCAGCCCGTTCCCTGCCGT---------ATGTGCTTTGAGCTGAGTCCACAG i papAnu2.chr4 I 673 C 0 s chlSab2.chr13 96663273 225 + 98384682 AATCTGCCTTTTGGCTGGACCCGGTTGATT-GGAACCACGTTCATTTGAGGAAGGCT-CCCTGCCACCAGAGCTCCCCCAGGACACTCCTTCCCCCCGCCGGCCGCGTCTGCAGGGAGCCCCTGAGAGGCAGCGGCAGACTGGATGCTGAATCCCATTCGCCCGGGTCATCTCCAGAGCGTCTCCCAGCCCGTTCCCCGCCAT---------GTGTGCTTTGAGCTGAGTCCACAG i chlSab2.chr13 I 674 C 0 s calJac3.chr4 169871364 214 + 171630274 aatctgccttttcccaggatccaggtgattGGGAACTGTATTCATCTGAGGAATGCT-CCTTGTGACCAGGGTCCCACCAAGG-ACTCCTTCCCTCTGCCTTTC---TCTGCAGGAAGCCCCTGAGAGACCACGGCAGGCAGGATGCCGAAT---------------GGGCTCCGGAG-GCCTTCCAA-CCATTCCCAGCCACGACCGGGATCTGTGCTTTGAGCTGAGTCTACAG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56163948 43 + 122678785 I e nomLeu3.chr3 156292508 0 + 157873769 C a score=958963.000000 s hg38.chr6_KB021644v2_alt 95532 360 + 185823 CAAAGACCACCTTGGTTCTTGTCCCGCCGCAACCACATCCGAAGAAAGGGGTCAGGTATTCTAGGCGTACGGGGACTGATAAATTCCAAAAATATGTTGCCTAGAAAA-GATTGTTAAAAAT---ATAAAGGCAAGTTTTATTCATTAATGTTCCCTTGCGCTGTCTGTGAAGAAAGGTAGGTTAAAGAGGTACTTCGAAGCAAATCTGTACCAGGAAAATAGAATTTGTTTTCACATCTTTTGAAAGATAAGTGAAATTCCTTCAGAGTCCACAC-CCATGCTTTTATAAACCTCTGATACACTAACAAATCCAAAGAAAAATTGAAAACAAGCGAGAA---AAAGGAGACAGAAAATGCACAAGAT s panTro4.chr6 170679015 360 + 172623881 CAAAGACCACCTTGGTTCT-GTCCCGCCGCAACCACATCCGAAGAAAGGGGTCAGGTATTCCAGGCGTACGGGGACTGATAAATTCCAAAAATATGTTGTCTAGAAAAAGATTGTTAAAAAT---ATAAAGGCAAGTTTTATTCATTAATGTTCCCTTGCGCTGTCTGTGAAGAAAGGTAGGTTAAAGAGGTACTTAGATGCAATTCTCTACCAGGAAAATAGAATTTGTTTTCACATCTTTTGCAAGATAAGTGAAATTCCTTCAGAGTCCACAC-CCATGCTTTTATAAACCTCTGATACACTAACAAATCCAAAGAAAAATTGAAAACAAGCGAGAA---AAAGGAGACAGAAAATGCACAAGAT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172428530 360 + 174210431 CAAAGACCACCTTGGTTCT-GTCCCGCCGCAACCACATCGGAAGAAAGGGGTCAGGTATTCTAGGCGTACAGGGACTGATAAATTCCAAAAATATGTTGTCTAGAAAAAGATTGTTAAAAAT---ATAAAGGCAAGTTTTATTCATTAATGTTCCCTTGCCCTGTCTGTGAAGAAAGGTAGGTTAAAGAGGTACTTAGAAGCAATTCTGTACCAGGAAAATAGAATTTGTTTTCACATCTTTTACAAGATAAATGAGATTCCTTTAGAGTCCACAC-CCCTGCTTTTATAATCCTCTGATACACTAACGAATCCAAAGAAAAATTGAAAACAAGCAAGAA---AAAGGAGACAGAAAATGCACAAGAT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156292508 357 + 157873769 CAAAGACCACCTTGGTTCT-GTCCCGCTGCAACCACATCGGAAGAAAGGGGTCAGGTATTCTAGGCGTACAGGGACTGATAAATTCCAAAAATATG-TGTCTAGAAAAAAATTGTTAAAAAT---ATAACGGCAAATTTTATTCATTAATATTCCCTTGCCCTGTCTGTGAAGAAAGGTAGGTTAAAGAGGTACTTAGAAGCAATTGTGTACCAGGAAAATAGAATTTGTTTTCGCATCTTTTGCAAGATAAATGAAATTCCTTTAGAGTCCACAC-CCATGCTTTTATAATCGCCTGATACACCAAC--ATCCAAAGAAAAATTGAAAACAAGCAAGAA---AAAGGAGACAGAAAAGGCACAGGAT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168112952 361 + 169853907 CAAAGACCTCCTTGGTTCT-GTCCCGTTACAACCACATCGGAAGAAAGGGGACAGGTATTCTAGAAGCACAGGCACTGACAAATTCCAAAAACATGTTGTCTAGAAAAACATTGTTAAAAATATCATAAAGACAAGTTTCATTCATTAATGTTCCCTTGCCCTGTCTGCGAAGAAAGGTAGGTTAAAGAGGTACTTAGAAGTAACTCTGTACCAGGAAAATAGAATTTGTTTGCACATATTTTGCAAGATAAATGAAATTCCTTTAGAGTCCACAC-CCATGCTTTTATAATCCTCTGACACACTAAC--ATCCAAAGAAAAATTGGAAACAAGCAAGAA---AAAGGAAGCAGAAAATGCACAAGAT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169067876 361 - 170955103 CAAAGACCTCCTTGGTTCT-GTCCCGTTACAACCACATCGGAAGAAAGGGGACAGGTATTCTAGAAGCACAGGCACTGACAAATTCCAAAAACATGTTGTCTAGAAAAACATTGTTAAAAATACCATAAAGACAAGTTTCATTCATTAATGTTCCCTTGCCCTGTCTGCGAAGAAAGGTAGGTTAAAGAGGTACTTAGAAGTAACTCTGTACCAGGAAAATAGAATTTGTTTGCACATATTTTGCAAGATAAATGAAATTCCTTTAGAGTCCACAC-CCATGCTTTTATAATCCTCTGACACACTAAC--ATCCAAAGAAAAATTGGAAACAAGCAAGAA---AAAGGAAGCAGAAAATGCACAAGAT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163886041 361 + 165299245 CAAAGACCTCCGTGGTTCT-GTCCCACTGCAACCACATCAGAAGAAAGGGGACAGGTATTCTAGAAGCACAGGCACTGACAAATTCCAAAAACATGTTGTCTAGaaaaacattgttaaaaataCCATAAAGACAAGTTTCATTCATTAATGTTCCCTTGCCTTGTCTGCGAAGAAAGGTAGTTTAAAGAGGTACTTAGAAGTAACTCTGCGCCAGGAAAATAGAATTTGTTTGCACATATTTTGCAAGATAAATGAAATTCCTTTAGAGTCCACAC-CCATGCTTTTATAATCCTCTGACACACTAAC--ATccaaagaaaaattggaaacaagcaagaa---aaaggaagcagaaaatgcACAAGAT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96663498 350 + 98384682 CAAAGACCTCCTTGGTTCT-GTCCCGCCGCAACCACATCGGAAGAAAGGGGTCAGGTATTCTAGAAGCACAGGCACTGACAAATTCCAAAAACATGTTGTCTAGTAAAACATTGTTAAAAATACCATAAAGACAAGTTTCATTCATTAATGTTCCCTTGCCCTGTCTGCAAAG-----------AAAGAAGTACTTAGAAGTAACTCTGCACCAGGAAAATAGAATTTGTTTTCACATATTTTGCAAGATAAATGAAATTCCTTTAGAGTTCACAC-CCATGGTTTTATAATCCTCTGACACACTAAC--ATCCAAAGAAAAGTTGGAAACAAGCAAGAA---AAAGGAAGCAGAAAATGCACAAGAT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169871578 359 + 171630274 CAAAGGCCGCCTTGGCTCT-CTCCCGGGGCCTATACTTTGGAAGAAAGGATGCAGGTGTTCTCGGAGGACAGGGACTGATACATTCCGAAAACATGTTGTCTAGAAAAAAATTCTTGCAAAT---AGGAGGACAAGTTTTATGCATGGATGCTCCCTTGCCCTGTCTGTGAAGAAAGGTGGGTTAAGTAGGTGCTTAGAAGCAATTCTGTACCAGCAAAAT---GTTTGTTTTCTCATATTTTGCAAGATAAGTGAAATTCCTTTAGCATCCCCCCTCCATGTTTTTATAATCCTCTGATAGACTAAC--ATCCAAACAAAACTTGGAAACAAGCAGGAAAAGAAAACAAATGGAGAAGCCCCGAGAT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56163948 43 + 122678785 I a score=2371862.000000 s hg38.chr6_KB021644v2_alt 95892 873 + 185823 ACACCGCCCTTTTTGTTTGTTTGTGATTCAGGGCTCA-GGATTGAC--TGGGTCCTCGGG--AGGGGACTCGAGGGCAGAAGGATCTATTAATCTTACAACTATGTGTTTCATTTTCCAAGTGGTCAGTTTT---TTAGGTTACTTTATGAAAAACTGAAATGGAACACAGAATATGAACAA-TTTCTCAGGGTAAGAGCAGCTAGATGTAAA----AATAACATAATGCAATTAAAGAAGAA--------ATCTTCCAGCAAATAGAACCCCATTTCGGGGAT--------------------TTTCACCGTGGGCGTGAGGGTCACACA--------AGACTGAAGCCCGCCC-AGGAGCAG-----------------------------------------GCG--------------------AGGTCACTGCAGG------------------------------------------------TGGTCAGTTAC----AGAGCTC------TGCGTCATAGCCCTCTGGCCCCAGA----------------CAAAATT----CACTCATC----------------------------------------------------------------------TATACA----------TTTGCTTGAAAATGCATTA-TTTGATATTCATTTTGTATAC-----TTAAATACAAAATGAAA-TGTAACCTGATATTGAAAATAAAAACTCCA-GGCAACGTCTACATTTCTAT----GTATTTAGTCTTTTCAAGGTCTACATTTTAAAAGCA-AGAAATGAACAAAGTTAGGAATACATTATTACTCTG--GCAGGAAAATTAGACGGATTGATGAAgt-gggttctgtctattgttatttatcctactagaaattaaactaaaaaaactt----------------------------------------------aaaatgtttttattctttaattaaaagcacaatagtaaatccattac----atgccaacataaataacgtgtaatg-aaaaataaatgtaatttttgaaccaaaccatcttgactgacaagagt--gctata----ctttctattgc---aaatccagtgtctgacttcccggaaggcagccagagtctgaggcc-actcccgcactccatctgtgtgggt------------ttgaagtgtgcagtg s panTro4.chr6 170679375 872 + 172623881 ACACCGCCCTTTTTGTTTGTTTGTGATTCAGGGCTCA-GGATTGAC--TGGGTCCTCGGG--AGGGGACTCGAGGGCAGAAGGATCTATTAATCTTACAACTATGTGTTTCATTTTCCAAGTGGTCAGTTTT---TTAGGTTACTTTATGAAAAACTGAAATGGAACACAGAATATGAACAA-TTTCTCAGGGTAAGAGCAGCTAGATGTAAA----AATAGCATAATGCAATTAAAGAAGAA--------ATCTTCCAGCAAATAGAACCCCATTTCGGGGAT--------------------TTTCACCGTGCGTGTGAGGGTCACACA--------AGACTGAAGCCCGCCC-AGGAGCAG-----------------------------------------GCG--------------------AGGTCACTGCAGG------------------------------------------------TGGTCAGTTAC----AGAGCTC------TGCGTCATAGCCCTCGGGGCCCAGA----------------CAAAATT----CACTCATC----------------------------------------------------------------------TATACA----------TTTGCTTGAAAATGCATTA-TTTG-TATTCATTTTGTATAC-----TTAAATACAAAATGAAA-TGTAACCTGATATTGAAAATAAAAACTCCA-GGCAACGTCTACGTTTCTAT----GTATTTAGTCTTTTCAAGGTCTACATTTTAAAAGCA-AGAAATGAACAAAGATAGGAATACATTATTACTCTG--GCAGGAAAATTAGACGGATTGATGAAgt-gggttctgtctattgttatttatcctactagaaattaaactaaaaaaactt----------------------------------------------aaaatgtttttattctttaattaaaagcacaatagtaaatccattac----atgccaacataaataacgtgtaatg-aaaaataaatgtaatttttgaaccaaaccatcttgactgacaagagt--gctata----ctttctattgc---aaatccagtgtccgacttcccagaaggcagccagagtctgaggcc-actcccgcactccatctgtgtgggt------------ttgaagtgtgcagtg i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172428890 880 + 174210431 ACACCGCCCTTTTTGTTTGTTTGTGATTCAGGGCTCA-GGATTGAC--TGGGTCCTCTGG--AGGGGACTCAAGGGCAGAAGGATCTATTAATCTTACAACTATGTGTTTCATTTTCCAAGTGGTCAGTTTT---TTAGGTTACTTCATGAAAAACTGAAATGGAACACAGAATATGAACAA-TTTCTCAGGGTAAGAACAGCTAGATGT-AA----AATAGCGTAATGCAATTAAAGACGAA--------ATCTTCCAGTGAATAGAACCCCATTTCGGGGAT--------------------TTTCACCGTGGGCGTGAGGGTCACGCA--------AGACTGAAGCCCCCCC-AGGAGCAG-----------------------------------------GCG--------------------AGGTCACTGCAGG------------------------------------------------TGGTCAGTTACGTCTGACGCACTGCAGGTGCGTCATAGCCTTTGGGGTCCAGG----------------CGAAATT----CACTCATC----------------------------------------------------------------------TATACA----------TTTGCTTGAAAATGCATTA-TTTGGTATTCATTTTGTATACTTAATTTAAATACAAAATGAAA-TGTAACCTGATATTGAAAAT---AACTCCAGGGCAATGTCTACATTTCTAT----GTATTTAGTCTTTTCAAGGTCTACATTTTAAAAGCA-AGAAATGAACAAAGATAGGAATAC---ATTTCTCTG--GCAGGAAAATTAGACAAATTGATAAAGTGgggttctgtctattgttatttatcctactagaaatcaaactaaaaaaactt----------------------------------------------aaaatgttt---ttctttaattaaaaacacaatagtaaacccatttc----atgccaacataaataatgtgtaatg-aaaaataaatgtaatttttgaaccaaaccatcttgactgacaagagt--gctata----ttttctattgc---aaatccagtgtccgacttcccggaaggcagccagagtctgaggcc-actcccgcactccatctgtgtgggt------------ttgaagtgtgcagtg i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156292865 871 + 157873769 ACACCGCCCTTTTTGTTTGTTTGTGTTTCAGGGCTCA-GGATTGAC--TGGGTCCTCGGG--AGGGGACTCGAGGGCAGAAGGATCTATTAATCTTACAACTATGTGTTTCATTTTCCAAGTGGTCAGTTTT---TTAGGTTACTTTGTGAAAAACTGAAATGGAACACAGAATATGAACAA-TTTCTCAGGGTAAGAGCAGCTAGATGT-AA----AATAGCATCATGCAATTAAAGAAGAA--------ATCTTCCAGCGAATAGAACCCCATTTCGGGGAT--------------------TTTCACCGTGGGCGTGAGGGTCACACA--------TGACTGAAGCCCGCCCGAGGGGCAG-----------------------------------------GCG--------------------AGGTCACTGCAGG------------------------------------------------TGGTCAGTTAC----AGAGCTG------TGCGTCACAGCCTTCGGGGCCCAGA----------------TGAAATT----CACTCTTC----------------------------------------------------------------------TATGCA----------TTTGCTTGAAAATGCATTA-TTTGATATTCATTTTGTATACTTAATTTAAATACAAAATGAAA-TGTAACCTGATATTGAAAATAAAAACTCCAGGGCAACGTCTACATTTCTAT----GTATTTAGTCTTTTCAAGGTCTACATTTTAAAAGCA-AGAAATGAACAAAGATAGGAATAT---ATTACTCTG--GCAGGAAAATTACACAAATTGATAAAgt-gggttctgtctattgttatttatcctactagaaat-----taaaaaaactt----------------------------------------------aaaatgttctcattctttaattaaaaacacaatagtaaacccattac----atgccaagataaataacgtgtaatt-aaaaataaatgtaatttttgaaccaaatcatcttgactgacaagagt--gctata----ctttctattgc---aaatccagtgtccgacttccgggaaggcagccagagtctgaggcc-acccttgcactctatctgtgtgggt------------ttgaagtgtgcagtg i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168113313 878 + 169853907 ACACCACCCTTTTTGTTTGTTTGTGTTTCAGGGCTCA-GGATTGAC--TGGGTCCTCGGG--AGGGGACTCGAGGGCAGAAGGATCTATTAATCTGACAACTATGTGTTTCATTTTCCAAGTGGGCAGTTTT---TTAGTTTACTTTATGAAAAGCTGAAATGGAACACAGAATATGAACAA-TTTCTCAGGCTAAGAACAGTTGGATAT-AA----AATAGCATAATGCAGTTAAAGAAGAA--------ATTGTCCAGTGAATAGGACCCCATTTCGGGGAT--------------------TTCCACAGTGGATGCGAGGGTCACACA--------TGACTGAAGCCCGCCCGAGGAGCAG-----------------------------------------GCA--------------------AGGTCACTTCAGG------------------------------------------------TGGTCAGTTAC----AGAGCTG------TGCGTCATAGCCTTTGGGGCCCAGA----------------CGAGATT----CACTCATC----------------------------------------------------------------------TACACA----------TTTGCTTGAAAATGCATTATTTTGATATTCATTTTGTATACTTAATTTAAATACAAAATGAAA-TATAACCTGATACTGAAAATAAAAACTCCAGGGCAACACCTACATTTCTAT----GTATTTCATCTTTTCAAGGTCTACATTTTAAAAGCA-AGAAATGAACAAAGATAGGAATAC---ATTACTCTG--GCAGGATAATCAGACGAACGGATAAAgt-gggttgtgtctcttgttatttatcctactagaaattaaactagaaaaactt---------------------------------------------taaaatgttttcactctttaattaaaaacacaatagtaaacccattcc----atgccaacataaatagcgtgtaatg-aaaaatccatgtaatttttgaaccaaaccatcttgactaacaagagt--gttata----ctttcctttgc---aaatccagtgtctgacctcccggaaggcagccagagtctcaggcc-actcccctactccacctgtgtgggt------------gtgaagtgtgcagtg i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169068237 878 - 170955103 ACACCACCCTTTTTGTTTGTTTGTGTTTCAGGGCTCA-GGATTGAC--TGGGTCCTCGGG--AGGGGACTCGAGGGCAGAAGGATCTATTAATCTGACAACTATGTGTTTCATTTTCCAAGTGGGCAGTTTT---TTAGTTTACTTTATGAAAAGCTGAAATGGAACACAGAATATGAACAA-TTTCTCAGGCTAAGAACAGTTGGATAT-AA----AATAGCATAATGCAATTAAAGAAGAA--------ATTGTCCAGTGAATaggaccccatttcggggat--------------------ttccacagtggacgtgagggtcacaca--------cgactgaagcctgcccgaagagcag-----------------------------------------gca--------------------aggtcacttcagg------------------------------------------------tggtcagttac----agagCTG------TGCGTCATAGCCTTTGGGGCCCAGA----------------CGAGATT----CACTCATC----------------------------------------------------------------------TACACA----------TTTGCTTGAAAATGCATTATTTTGATATTCATTTTGTATACTTAATTTAAATACAAAATGAAA-TATAACCTGATACTGAAAATAAAAACTCCAGGGCAACACCTACATTTCTAT----GTATTTCATCTTTTCAAGGTCTACATTTTAAAAGCA-AGAAATGAACAAAGATAGGAATAC---ATTACTCTG--GCAGGATAATCAGACGAACGGATAAAgt-gggttgtgtctcttgttatttatcctactagaaattaaactagaaaaactt---------------------------------------------taaaatgttttcactctttaattaaaaacacaatagtaaacccattcc----atgccaacataaatagcgtgtaatg-aaaaatccatgtaatttttgaaccaaaccatcttgactaacaagagt--gttata----ctttcctttgc---aaatccagtgtctgacctcccggaaggcagccagagtctcaggcc-actcccctactccacctgtgtgggt------------gtgaagtgtgcagtg i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163886402 872 + 165299245 ACACcaccctttttgtttgtttgtgtttcagGGCTCA-GGATTGAC--TGGGTCCTCGGG--AGGGGACTCGAGGGCAGAAGGATCTATTAATCTGACAACTATGTGTTTCATTTTCCAAGTGGGCAGTTTT---TTAGTTTACTTTATGAAAAGCTGAAATGGAACACAGAATATGAACAA-TTTCTCAGGCTAAGAACAGTTGGATAT-AA----AATAGCATAATgcaattaaagaagaa--------attgtCCAGTGAATAGGACCCCATTTCGGGGAT--------------------TTTCACAGTGGACGTGAGGGTCACACA--------CGACTGAAGCCCGCCTGAGGAGCAG-----------------------------------------GCA--------------------AGGTCACTTCAGG------------------------------------------------TGGTCAGTTAC----AGAGCTG------TGCGTCATAGCCTTCGGGGCCCAGA----------------CGAGATT----CACTCATC----------------------------------------------------------------------TACACA----------TTTGCttgaaaatgcattattttgatATTCATTTTGTATActtaatttaaatacaaaatgaaa-tataacctgatactgaaaataaaaactccaGGGCAACACCTACATTTCTAT----GTATTTCGTCTTTTCAAGgtctacattttaaaagca-agaaatgaacaaagatggGAATAC---ATTACTCTG--GCAGGAAAATCAGACGAACGGATAAAGT-GGGTTGTGTCTCTTGTTATTTATCCTACtagaaattaaactagaaaaactt---------------------------------------------aaaaatgttttcactctttaattaaaaacacaatagtAAACCCATTCC----ATGCCAACATAAATAGCGTGTAATGAAAAAATCCATGTAATTTTTGAACCTAACCATCTTGACTGACACGAGT--GTTATAGTTTGTTTCCTTTGC---AGAT-----------CCTCCCGGAAGGCAGCCAGAGTCTCAGGCC-ACTCCTGCACTCCACCTGTGTGGGT------------GTGAAGTGTGCAGTG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96663848 877 + 98384682 ATACCGCCCTTTTTGTTTGTTTGTGTTTCAGGGCTCA-GGATTGAC--TGGGTCCTCGGG--AGGGGACTCGAGGGCAGAAGGATCTATTAATCTGACAAGAATGTGTTTCATTTTCCAAGTGGGCAGTTTT---TTAGTTTACTTTATGAAAAACTGAAATGGAACACAGAATATGAACAA-TTTCTCAGGCTAAGAACAGTTAGATAT-AA----AATAGCATAATGCAATTAAAGAAGAA--------ATTGTCCAGTGAATAGGACCCCatttcagggat--------------------tttcacagtggacatgagggtcacaca--------cgacaGAAGCCCTCCCGAGGAGCAG-----------------------------------------GCA--------------------AGGTCACTTCAGG------------------------------------------------TGGTCAGTTAC----AGAGCTG------TGCATCATAGCCTTCGGGACCCAGA----------------CGAGATT----CACTCATC----------------------------------------------------------------------TACACA----------TTTGCTTGAAAATGCATTATTTTGATATTCATTTTGTATACTTAATTTAAATACAAAATGAAA-TATAACCTGATACTGAAAATAAAAACTCCAGGGCAACACCTACATTTCTAT----GTATTTCGTCTTTTCAAGGTCTACATTTTAAAAGGA-AGAAATGAACAAAGATAGGAATAC---ATTACTCTG--GCAGGAAAATCAGACGAACGGATAAAgt-gggttgtgtctcttgttatttatcctactagaaattaaactagaaaaactt---------------------------------------------aaaaatgttttcactctttaattaaaaacacaatagtaaacccattcc----atgccaacataaatagcgtgcaatgaaaaaatccatgtaatttttgaaccaaaccatcttgactgacacgagt--gttata----ctttcctttgc---agatccagtgtctgacctcccggaaggcagccagag--tcaggcc-actcccccactccacctgtgtgggt------------gtaaagtgtgcagcg i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169871937 832 + 171630274 GCACTGCCC--GTTGTCTGTTCGTCATTCGGGGCCCA-GGACTGGC--TGGTCCCCAGGC--AGAGGGC----------------CTAGTAACCTCACATCCATGCATTTCATTTCCCAAGTGCTCAGCTTT--------TTACTTTATGAAAAACTGAAACGGAGCACAGAATGCGAACTG-TGTCTCAGGGTGAGAACAGCCATACAC-AA----AACAACAGACTGCAATTAAAGAGGAA----------CCTTCAGTGAATAGAAACCACGTGAGGGAAGAACATGCCCGACGGACGCCATTCCCCGGTGG----GAAGGCCACACG--------TGACTCAAGCCGGTCCGAGCAGCA------------------------------------------GCG--------------------CGGCCACTCTACG------------------------------------------------TGGTCAAGGAC----AGAGCCG------GGCTTCATAGCCTTAGCAGC------------------------------------------------------------------------------------------------------------------------------TTTGCTTGAAAATGCA----TTTGATACTAATTCTCTATGTTTAATTTAAATACAAAATGAAA-TGTATCCTGATGTTGAAAATGTCAACTCCAGGGTAACATCTGCATTCCTGT----GTATTTAGTGTCTTCAGGGTCTACATTTTCAAAATAGAGAAACGAATAAAGG------------A------------------------------GATAAAGT-GGGTTATGTC---TGTTGCTTGTCCTACTGGAAATTAAACTAAAATACCTGAAAAATGTTTTTATTCTCttgtcctactagaaattaaaatacctgaaaaatgtttttattctttaatttaaaacacaat-gaaaacccatcac----atgccaacataaataacgtgtaatg-aaaaagaaatataattctcaaaccaaaccatcttgaatgacaagagt--gctgtg----ctttccatggc---aaatccagcatccagcttcctggaagccgg-cggagccccaggcc-gc-cctgcactctgtctgtG---------------------AGTGTGTGGTG i calJac3.chr4 C 0 I 2642 s canFam3.chr1 56163991 1136 + 122678785 ATAATGCCTTATTTG--TATTTGTTTTTCAGGGTTTAGGGATTGATCACGGGTCCCAGGGGAAGGGGGGACGAGGG-AGAGGAACTTATTAGTCTTGTTACTATGTGTTTTGTTTTTTCAGAGGTTAGTTTTTGTTTAGTTTGCTTTATTAAAAATTGAAATGGAGCACTGAATTTGAATGATTTTCTTAGGGTAAGAACAACTGGATAT-GAAATGAATAAAATATTGCAATTAAAGGAAAATAAAATGAATCTTACAGTGACTAGAACTTCATTTTGGGGAAAACATACTTGCTGAGCAAT-ACCTACCCCAGGAGTGGTGGGCGTGCAGAGTGGTGAGACCACCGCCGGCCCGATGGGCTGCACCATCTGGCTCATGTGTGATTGTCAAGCTGCCGAATGGTGCACCCACTTAAGTGGTGCTAGCAGCCCACTAAAGATTTACTTATGTAAAAACTTGGTTCAAAATACAACATTTGAggggcacctgggtagttca----gtagttg------agcatc--tgcctttgg--cccagggcatgatccccggtcccgagattgagcccctcatcgggctccccgcagggagcctgcttctctctctgcctgtgtctctgcctctctgtgtgtgtctctcacaaataaataagtaaaatcttTTTTTTTTAAATACAACA-TTTGATATTCATTTTATACATTGAATTTAAGTACGAAATAAAATTTTATCCTGAGGTTGAAGATATTAACTCTGGGGCAAGGTCTACATTCCTTTTTTATTACTTGTTTTCTTTAAGGTCTGCATTTTAAAAGTTCAGAAAAGAACAAAGGTAGGAACCA---GTCACTCTGTAGTGGGAAAGT-----GAATTGATAGAGT-ACgctgtaccttttgatatttatcctatcagaaact--------aaaactg----------------------------------------------aagaggttttaaagc-----ttaaaagcacattaatcaacccatttcttatttgtcaacatgagtaacgtttaatg-aaaaataaatgtaattttcaagccaaacaatcgttagtggcaagagctggcgtta----cttcacattgctcacaatccagag--cgggcttgcagaaggcagccagggtctcccacctgccctcgtgttaagtctgtgtcgataggatgttttgatcgaagtgtgcaaag i canFam3.chr1 I 43 C 0 a score=1319763.000000 s hg38.chr6_KB021644v2_alt 96765 577 + 185823 aatactcagtgtcactcccaaatgtat-taggaaagaggagattattttaataacctt-tcctaggtaatt-gtggtgattctttgataccacccccaagccccaaaggtggtagcttcttaaaggtgcgctgttgtgtgggatctg--agcccta--------ttgcctgggcat-gcacctgcccctgtgtcggcatccatgggcccgtggcaccgcagatggtcttcgcttgctcgtcactttataccatcccgcagtgga-------aacaatcagctcactgagt--tctgcagatcttccaaatgttgacacttctcactacacaatat-aaaaagcat--ttctgttgacctccccacagatgtcctcaaaa-caccctttaagccagtgacaggctcacaga--gggagacacaaggtctttgggattgtcactttcatagtgatgcttgaatttttatcataggcaacaaaaactgtcagccgtcatccttgaaatgacagactc----cctcatttttgagaaa-tgtctgccagttctagttcccaagtctgaatgaccagggctggcaggtcggtcatggtcttaagtaaccgtg-gtga s panTro4.chr6 170680247 581 + 172623881 aatacttagtgtcactcacaaatgtat-taggaaagaggagattattttaataacctt-tcctaggtaatt-gtggtgattctttgataccacccctaagccccaaaggtggtagcttcttaaaggtgtgctgttgtgtgggatctg--agcccta--------ttgcctgggcac-gcacctgcccctgtgtcggcatccacgggcccgtggcaccatggatggtcttcgcttgctcgtcactttataccatcccgtggtgga-------aacaatcagcttaccgagt--tctgcagatcttccaaatgttgacacttctcactactcaatat-aaaaagcat--ttctgttgacctccccacagatctcctcaaaa-caccctttaagccagtgacaggctcacaga--gggagacacaaggtctttgggactgtcactttcatagtgatgcttgaatttttatcataggcaacaaaaactgtcagccgtcatccttgaaatgacagactcacttcctcatttttgagaaa-tgtctgccagttctagttcccaagtctgaatgaccagggctgggaggttggtcatggtcttaagtaaccgtg-gtga i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172429770 576 + 174210431 aatactcagtgtcactcacaaatgtat-taggaaagaggagattattttaataacctt-tcctaggtaatt-gtggttattctttgataccacccccaagccccaaaggtggta-tttcttaaaggtacactgttgtgtgggatctg--agccctc--------ctgcctgggcat-gcacctgcccctgtgtcggcattcacgggcccatggcaccgcag-tggtcttcgctcgctcgtcactttgtaccatcctgcagtgga-------aacaatcagctcactgagt--tctgcagatcttccaaatgttgacacttctcattacacaatat-aaaaagcat--ttttgttaacctccccacagatctcctcaaaa-caccctttaagccagtgacaggctcacagg--gggagacaca---tctttggaattgtcactttcacagtgatgcttgaatttttatcataggcaacaaaaactgtcagccatcatccttgaaatgacagactcactttctcatttctgagaaa-tgtctgccagttccagttcccaagactgaatgaccagggctggcaggtcggtcatggtcttaagtaactttg-gtga i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156293736 581 + 157873769 aatactttgtgtcactcacaaatgtat-taggaaagaggagattattttaataacctt-tcctaggtaatt-gtggttattcttcgatatcacccccaagccccaaaggtggtagcttcttaaagatgcaccgccgtgtgggatctg--agccctc--------ctgcctgggcac-gcacctgcccctgcgtcggcatccacgggcccatggcaccgcag-tggtcttc-ctcgcttgtcactttgtaccatcctgcggtgga-------aacaaacagctcactgagt--tctgcagatcttccgaatgttgacacttctcactacacaatat-agaaagcat--ttttgttaacctccccacagatctcctcaaaa-caccctttaagccagtgacaggctcacagacggagagacacaaggtctttggaattgtcactttcacagtgatgcttgaatttttatcataggcaataaaaactgtcagccatcatctttgaaatgacagactcacttcctcatttttgagaaa-tatctgccagttccagttcccaagtctgaacgaccagggctggcaggtcagtcaccgtcttcagtaaccgtg-gtga i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168114191 564 + 169853907 aatactcagtgtcactcacaaatgtat-tagaaaagaggaggttattttattaacctt-tcctaggtaatt-gtggttgttcttcgataccacccccaagccccaaagatggtaacttcttaaaggtgtgtcgtcttgtaggatctg--agccctc--------ctgcctgggcac-gcacctgcccctgcgtcgaaatccacaggcccgtggcaccatgg-tggttttcacttgctcgtcactttgtaccatcctgtggtaga-------aacaatcagcttactgagt--tctgcagatctcccaaatgttgacacttctcactacacaatat-aaaaagcat--ttttgttaacttccccacagatctcctcagaa-caccctttaagccactgacaggcttacaga--gggaggtacaaggtcttt-gaattgccactttcacagtgatgcttgaatttttatcatagacaacaaaaactgtcagccgtcatccttgaaaagacagactcacttcctcatttttgagaaa-cgtctgcc------agttcccgagtctgaacgaccagggctggcaggtcggtcatggtcttaagtaa---------- i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169069115 564 - 170955103 aatactcagtgtcactcacaaatgtat-tagaaaagaggaggttattttattaacctt-tcctaggtaatt-gtggttgttcttcgataccacccccaagccccaaagatggtaacttcttaaaggtgtgtcgtcttgtaggatctg--agccctc--------ctgcctgggcac-gcacctgcccctgcgtcgaaatccacaggcccgtggcaccatgg-tggttttcacttgctcgtcactttgtaccatcctgtggtaga-------aacaatcagcttactgagt--tctgcagatctcccaaatgttgacacttctcactacacaatat-aaaaagcat--ctttgttaacttccccacagatgtcctcagaa-caccctttaagccactgacaggcttacaga--gggagatacaaggtctct-gaattgtcactttcacagtgatgcttgaatttttatcatagacaacaaaaactgtcagccgtcatccttgaaaagacagactcacttcctcatttttgagaaa-cgtctgcc------agttcccgagtctgaacgaccagggctggcaggtcggtcatggtcttaagtaa---------- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163887274 566 + 165299245 AATACTCAGTGTCACTCACGAATGTAT-TAGAAAAGAGGAGGTTATTTTATTAGCCTT-TCCTAGGTAATT-GTGGTTGTTCTTCGATACTACCCCCAAGCCCCAAAGGTGGTAACTTCTTAAAGGTGCCCCGTCGTGTGGGATCTG--AGCCCTC--------CTGCCTGGGCAC-ACACCTGTCCCTGCATCGAAATCCACAGGCCCGTGGCACCAGGG-TGGTTTTCACTCGCTCGTCACTTTGTACCATCCTGTGGTAGA-------AACAATCAGCTTACTGAGT--TCTGCAGATCTCCCAAATGTTGACACTTCTCACTATACAATATAAAAAAGCAT--TTTTGTTAACCTCCCCACAGATCTCCTCAGAA-CACCCTTTAAGCCACTGACAGGCTTCCAGA--GGGAGATACAAGGTCTTTGGAATTGTCACTTTCACAGTGATGCTTGAATTTTTATCATAGGCAACAAAAACTGTCAGCCGTCATCCTTGAAAAGACAGACTCACTTCCTCATTTTTGAGAAA-CGTCTGCC------AGTTCCCGAGTCTGAACGACCAGGGCTGGCAGGTCGGTCATGGTCCTAAGTAA---------- i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96664725 565 + 98384682 aatactcagtgtcactcacaaaagaat-tagaaaagaggaggttattttattaacctt-tcctaggtaatt-gtggttgttcttcgataccacccccaagccccaaaggtggtaacttcttaaaggtgccctgtcgtgtgggatctg--agccctc--------ctgcctaggcac-gcacctgcccctgcgtcgaaatccacaggcccatggcaccaggg-tggttttcactcgctcatcgctttgtaccatcctgtggtaga-------aacaatcagcttactgagt--tctgcagatctcccaaatgttgacgcttctcactatacaatat-aaaaagcat--ttttgttaacctccccacagatctcctcagaa-caccctttaagccactgacaggcttccaga--gggagatacaaggtctttggaattgtcactttcacagcgatgcttgaatttttatcatagacaacaaaaactgtcagccatcatccttgaaaagacagactcacttcctcatttttgagaaa-cgtctttc------agttcccgagtctgaacgaacagggctggcaggtcggtcatggtcttaagtaa---------- i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56165127 552 + 122678785 aatatcaagcatccttcagatacatagacaggagagggaggattattttaaaaaaattagcccaggaaactggctattgttctctggc----------aggtcctgtggtagtagtttcctgaaagtgagctgcacttggggacctggaagcccccaagttggaaggtctgggttctgcatttgcctcatcg-----acctgctgcaccatgtgagcacac-ctgttccccct---gcgtcacattacagcatcatgcatggaacttccagaaatatcggtccattgaggtatatgcaggtcttccaaacatcatcaggtctcattcaaccttct-gttcagaatcgttttgttaacgtcaccaccgctaccagaaaactcaccgatggggcggctggcaggcttacaggccagaagctcca-----------------gttttcactcggatgctcgga-gtgtaccttgg----caagtattg-------tagtcctggaaaagacag--tcacctcctcgtttttgagaaagtgtctgcc-----tgattcccaagtccgagtcatcagagtttgtctgtcgatttt--tcttacagaacctcgtgt-- i canFam3.chr1 C 0 C 0 e calJac3.chr4 169872769 2642 + 171630274 I a score=39567.000000 s hg38.chr6_KB021644v2_alt 97342 13 + 185823 cccatgGGAGGAA s panTro4.chr6 170680828 13 + 172623881 cccatgGGAGGAA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172430346 13 + 174210431 cccatgGGAGGAA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156294317 13 + 157873769 cccatgGGAGGAA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168114755 12 + 169853907 -CCATAGGAGGAA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169069679 12 - 170955103 -CCATAGGAGGAA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163887840 12 + 165299245 -CCATGGGAGGAA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96665290 12 + 98384682 -CCATAGGAGGAA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169875411 13 + 171630274 CCTGTGGGGGGAG i calJac3.chr4 I 2642 C 0 s canFam3.chr1 56165679 13 + 122678785 cccctggaatgga i canFam3.chr1 C 0 I 4699 a score=425391.000000 s hg38.chr6_KB021644v2_alt 97355 152 + 185823 CTGCCTGTGATCCCTGAGTTTCCATAGCCCTAAATTATTGTAATGACGATATCCATGGAAGACTTGTGAAATTATACAATTATAAAATGTGCAATAAAGTCAACAGGAGATTGCTCTTGGATAAGCCCAGCACAGGGAAACGTAATTTGA-CA s panTro4.chr6 170680841 152 + 172623881 CTGCCTGTGATCCCCGAGTTTCCATAGCCCTAAATTATTGTAATGACGATATCCATGTAAGACTTGTGAAATTATACAATTATAAAATGTGCAATAAAGTCAACAGGAGATTGCTCTTGGATAAGCCCAACACAGGGAAACGTAATTTGA-CA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172430359 152 + 174210431 CTGCCTGTGATCCCCGAGTTTCCATAGCCCTAAATTATTGTAATGACGATATCCATGGAAGACTTGTGAAATTATACAATTATAAAATGTGCAATAACGTCAACAGGAGATTGCTCTTGGATAAGCCCAGCACAGGGAAATGTAATTTGA-CA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156294330 152 + 157873769 CTGCCTGTGATCCCCGAGTTTCCATAGCCCTAAATTATTGTAATGATGATATCCATGGAAGACTTGTGAAATTATACAATTATAAAACGTGCAATAACGTCAACAGGAGATTGCTCTTGGATAAGCCCAGCACAGGGAAATGTAATTTGA-CA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168114767 152 + 169853907 CTGCCTGGGATCCCCGAGTTTCCACAGCCCTAAATTATCGTAATGACAATATCCATGGAAGACTTGAGAAAGGATACAATTATAAAATGTGCAATAACGTCGACAGGAGATTACTCTTGGATAAGCCCAGCCCGGGGAAACATAATTTGA-CA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169069691 152 - 170955103 CTGCCTGGGATCCCCGAGTTTCCATAGCCCTAAATTATCGTAATGACAATATCCGTGGAAGACTTGAGAAAGGATACAATTATAAAATGTGCAATAACGTCGACAGGAGATTACTCTCGGATAAGCCCAGCCCAGGGAAACATAATTTGA-CA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163887852 152 + 165299245 CTGCCTGGGATCCCCAAGTTTCCATAGCCCTAAATTATCGTAATGACAATATCCATGGAAGACTTGAGAAAGGatacaattataaaatatgcAATAACGTCGACAGGAGATTACTCTTGGATAAGCCCAGCCCAGGGAAACATAATTTGA-CA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96665302 152 + 98384682 CTGCCTGGGATCCCCGAGTTTCCATAGCCCTAAATTATCGTAATGACAATATCCATGGAAGACTTGAGAAAGGATACAATTATAAAATGTGCAATAACTTCGACAGGAGATTGCTCTTGGATAAGCCTAGCCCAGGGAAACATAATTTGA-CA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169875424 150 + 171630274 CTGCCTGTGATCCC-AAGTTCCCATCACCCTAAATTATTGGAATGACAGTATCCATGGAAGACTCGTGAAGCTACACAGTTATAACGTGTG--ATAACCTCAATAGGAGGCTGCTCTTGGATGAACCCAGCACAGAGAAAGGTCGTTCGACCA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56165692 4699 + 122678785 I a score=1808523.000000 s hg38.chr6_KB021644v2_alt 97507 638 + 185823 GTTGATTGGCCCCCC-----------------------GGT-----GCTTTTCTGAAAAGAAATCACCAAGGCCAGGAGGGACACGAAAC--GCTTCTTCGTGTGTCGGCCCGTGTGCAGAATATCTCCAAGATATAAATGACTAA----GAAGACTTAATTTGCCACCACAATATGTTT------GCTGCAATTAATTTGGGGTGACTTGTATTTTAGCTTGGATCAA-AAATGGGATCTGAAATGTAAAGAACACTGTTAGATTT-CCCCACAGGCCGCTCTCTCTTTGGGTGATTTGCTAACTTTTAATTTGCATTGATTCTCTGAAGGGATCTTAATTCAGATGTCTCTCCACCTCTTCGCTGTAGTTTTACTTGGCCTTAGTCACGTGATCTTTGGGAGGTTTTAGG-GAACGTTATCTAGAAAAAGAA-ATCACTTTAGATATTAACAAATGCAG-AAATGAATCAGTCCATTCATCATTAGGGAAAATGAATTGTTCCAGAACCCAGGATTCTATAAAGTAAAATAACACTTACTTTGGAATTGCTAAGGGGTTTAAAAACACCCACTCCATCAAGCCTGTGAGCTGAACCCCAGGCCTGCACGTATGGCGGA---GTGTGTAATGCCTGTGTGTGTTTCAGAGACC--ACAATTCCCAGTCCCCACT-CCAGGTCCTGTGC s panTro4.chr6 170680993 649 + 172623881 GTTGATTgccccccccccccc------------gcgccggT-----GCTTTTCTGAAAAGAAATCACCAAGGCCAGGAGGGACACGAAAC--GCTCCTTCGTGTGTCGGCCCATGTGCAGAATATCTCCAAGATATAAATGACTAA----GAAGACTTAATTTGCCACCACAATATGTTT------GCTGCAATTAATTTGGGGTGACTTGTATTTTAGCTTGGATCAA-AAATGGGATCTGAAATGTAAAGAACACTGTTAGATTT-CCCCACAGGCCGCTCTCTCTTTGGGTGATTGGCTAACTTTTAATTTGCATTGATTCTCTGAAGGGATCTTAATTCAGATGTCTCTCCACCTCTTCGCTGTAGTTTTACTTGGCCTTAGTCACGTGATCTTTGGGAAGTTTTAGG-GAACGTTATCTAGAAAAAGAA-ATCACTTTAGATATTAACAAATGCAG-AAATGAATCAGTCCATTCATCATTAGGGAAAATGAATTGTTCCAGAACCCAGGATTCTATAAAGTAAAATAACACTTACTTTGGAATTGCTAAGGGGTTTAAAAACACCCACTCCATCAAGCCTGTGAGCTGAACCCCAGGCTTGCATGTATGGCAGA---GTGTGTAATGCCTGTGTGTGTTTCAGAGACC--ACAATTCCCAGTCCCCACT-CCAGGTCCCGTGC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172430511 643 + 174210431 GTTGATTGTCACCCCCCCATC------------CCCCCAGT-----GCTTTTCTGAAAAGAAATCACCAAGGCCAGGAGGGACACGAAAC--ACTCCTTCGTGT-TTTGCCCGTGTGCAGAATATCTCCAAGATATAAATGACTAA----GAACACTTAATTTGCCACCAC---ATGTTT------GCTGCAATTAATTTGGGGTGACTTGTATTTTAGCTTGGATTAA-AAATGGGATCTGAAATGTAAAGAACACTATTAGATTT-CCCCACAGGCCACTCTCTCTTTGGGTGATTTGCTAACTTTTAATTTGCATTGATTCTCTGAAGGGACCTTAATTCAGATGTCTCTCCACCTCTTCGCTGTAGTTTTACTTGGCCTTAGTCATGTGATCTTTGGGAGGTTTTAGG-GAACGTTATCTAGAAAAAGAA-ATCACTTTAGATATTAACAAATGCAG-AAATGAATCAGTCCATTCATCATTAGGGAAAATGAATTGTTCCAGAACCCAGGATTCTATAAAGTAAAATAACACTTACTTTGGAATTGCTAAGGGGTTTAAAAACACCCACTTCATCAAGCCTGTGAGCTGAACCCCAGGCCTGCATGTACAGCGGG---GTGTGTAATGAC--TGTGTGTTTTGGAGCCC--ACAATTCCCAGTCCCCACT-CCAGCTTCCGTGC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156294482 636 + 157873769 GTTGATTGGCCCCCC----------------------CGGT-----GCTTTTCTGAAAAGAAATCACCAAGGC--GGAGGGACACGAAAA--GCTCCTTCGTGTATCGGCCCATGTGCAGAATGTCTCCAAGATATAAATGACTAA----GAACACTTAATTTGCCACCAGAATATGTTT------GCTGCGATTAATTTGGGGTGACTTGTATTTTAGCTTGGATTGA-AAATGGGATCTGAAATGTAAAGAACACAGCTAGATTTCCCCCACAGGCCGCTCTCTCTCTGGGTGATTTGCTAACTGTTAATTTGCATTGATTCTCTGAGGGGACCTTAATTCAGATGTCTCTCCACCTCTTCGCTGTAGTTTTACTTGGCCTTAGTCATGCGATCTTTGGGAGGTTTTAGG-GAACGTTATCCAGAAAAAGAA-ATCACTTTAGATGTTA--AAATGCAG-AAATGAATCAGTCCATTCATCATTAGGGAAAATGAATTGTTCCAGAACCCAGGATTCTATAAAGTAAAATAACACTTACTTTGGAATTGCTAAGGGGTTTAAAAACACCCACTCCATCAAGCCTGTGAGCTGAACCCCAGGCCTGCACGTATGGCGGG---GTATGTAATGCTTGTGTGTGTTTCAGAGCCC--ACAACTCCCAGTCCCCACT-CCAGCTCCTGTGC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168114919 639 + 169853907 GTTGATTGGCCCGTT-----------------------GGT-----GCTTTTCTGAAAAGAAATCACCAAGGCCAGGAGGGGTATGAAAC--GCTCCTTCGTGTACCAGCCCATGTGCAGAATGTCTCCAAGATATAAATGACTGA----GAACACTTAATTTGCCACCACAGTATGTTT------GTTGCAATTAATTTGGGGTGACTTGTATTTTAGCTTGGATTAA-ACATTGGGTCTGAAATATAAAGAACACTGTTAGATTT-CCCCACAGGCCGCTCTCTCTTTGGGTGAGTTGCTAACTTTTAATTTGCATTGATTCTCTGAAGGGACCTTAATTCCGATGTCTCTTCACCTCTTCGCTGTCGTTTTACTTGGCCTTAGTCATACGATCTTTGGGAGGTTTTAGGTGAATGTTATCTAGAAAAAGAA-ATCACTTTAGATATTTACAAATGCAG-AAATGAATCAGGCCTTTCATCATTAGGGAAAATGAATTGTTCCAGAGCCCAGGATCCTATAAAGTAAAATAACACGTACCTTGGAATTGCTAAGGGGTTTAAATACACCCACTCTGTCAAGCCTGTGAAGTGAACCCCAGGCCTGCATGCATGGCGGG---GTGTGTAATGCCTGTGTGTGTTTCGGAGCCC--ACAATTCTCAGTCCCCACT-CCAGCTCCGGTGC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169069843 639 - 170955103 GTTGATTGGCCCGTT-----------------------GGT-----GCTTTTCTGAAAAGAAATCACCAAGGCCAGGAGGGGTATGAAAC--GCTCCTTCGTGTATCAGCCCATGTGCAGAATGTCTCCAAGATATAAATGACTGA----GAACACTTAATTTGCCACCACAGTATGTTT------GTTGCAATTAATTTGGGGTGACTTGTATTTTAGCTTGGATTAA-ACATTGGGTCTGAAATGTAAAGAACACTGTTAGATTT-CCCCACAGGCCGCTCTCTCTTTGGGTGAGTTGCTAACTTTTAATTTGCATTGATTCTCTGAAGGGACCTTAATTCCAATGTCTCTTCACCTCTTCGCTGTAGTTTTACTTGGCCTTAGTCATACGATCTTTGGGAGGTTTTAGGTGAATGTTATCTAGAAAAAGAA-ATCACTTTAGATATTTACAAATGCAG-AAATGAATCAGGCCTTTCATCATTAGGGAAAATGAATTGTTCCAGAGCCCAGGATCCTATAAAGTAAAATAACACGTACCTTGGAATTGCTAAGGGGTTTAAATACACCCACTCCGTCAAGCCTGTGAAGTGAACCCCAGGCCTGCATGCATGGCGGG---GTGTGTAATGCCTGTGTGTGTTTCGGAGCCC--ACAATTCTCAGTCCCCACT-CCAGCTCCGGTGC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163888004 639 + 165299245 GTTGATTGGCCCCTT-----------------------GGt-----gcttttctgaaaagaaatcaCCAAGGCCAGGAGGGGTATGAAAC--GCTCCTTCGTGTATCAGCCCATGTGCAGAATGTCTCCAAGATATAAATGACTGA----GAACACTTAATTTGTCACCACAATATGTTT------GTTGCAATTAATTTGGGATGACTTGTATTTTAGCTTGGATTAA-ACATTGGATCTGAAATGTAAAGGACACTGTTAGATTT-CCCCACAGGCCGCTCTCTCTTTGGGTGAGTTGCtaacttttaatttgcattgatTCTCTGAAGGGATCTTAATTCCGATGTCTCTTCACCTCTTCGCTGTAGTTTTACTTGGCCTTAGTCACGCGATCTTTGGGAGGTTTTAGGTGAATGTTATCTAGAAAAAGAA-GTCACTTTAGATATTCACAAATGCAG-AAATGAATCAGGCCTTTCATCATTAGGGAAAATGAATTGTTCCAGAGCCCAGGATCCTATAAAGTAAAACGACACTTAACTTGGAATTGCTAAGGGGTTTAAATACACCCACTCTGTCAAGCCTGTGAAGTGAACCCCAGGCCTGCATGCATGGCGGG---GTGTGTGATGCCTGTGTGTGCTTCGGAGCCC--ACAATTCTCAGTCCCCACT-CCAGCTCTGGTGC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96665454 639 + 98384682 GTTGATTGGCCCCTT-----------------------GGT-----GCTTTTCGGAAAAGAAATCACCAAGGCCAGGAGGGACATGAAAT--GCTCCTTCGTATATCGGCCCATGTGCAGAATGTCTCCAAGATATAAATGACTGA----GAACACTTAATTTGCCACCACAGTATGTTT------GTTGCAATTAATTTGGGGTGACTTGTATTTTAGCTTGGATTAA-ACATTGGGTCTGAAATGTAAAGAACACTGTTAGATTT-CCCCACAGGCCACTCTCTCTTTGGGTGAGTTGCTAACTTTTAATTTGCATTGATTCTCTGAAGGGACCTTAATTCTGATGTCTCTTCACCTCTTCGCTGTAGTTTTACTTGGCCTTAGTCATGAGATATTTGGAAGGTTTTAGGTGAATGTTATCTAGAAAAAGAA-ATCACTTTAGATATTCACAAATGCAG-AAATGAATCAAGCCATTCATTATTAGGGAAAATGAATTGTTCCAGAGCCCAGGATCCTATAAAGTAAAATAACACTTAACTTGGAATTGCTGAGGGGTTTAAATACACCCATTCCGTCAAGCCTGTGAAGTGAACCCCAGGCCTGCATGCATGGCGGG---GTGTGTAATGCCTGTGTGTGTTTCGGAGCCC--ACAATTCCCAGTCCCCACT-CCAGCTCTGGTGC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169875574 651 + 171630274 GATTATTGCCCCCTGCCCGACCATGCCACGCAGCTTCTGGA-----GCTTTTCCGTGAAGAAATTGCCAAGGCCAACAGGGACCTGACCC--TCTCCTTCGTGTACCGGTCCATGTGCAGAATATCTCCAAGATACAAATGACTAA----GAATGCCTAATTTGCCACAGCAGTGTGTGT------G--GTAATTAGGTTGGGGTGACCTGTGTCCCAGCTTGTATTAA-AAATGGGATCTAAAGTGTGAAGAACA--GTTAGATTT-CCCCACAGGCTGCTCTCTCTTTGGGTGATGTCCTACGTTCTGATTTGCCTGGATTCTCTGAAGGGACCTTAACTCAGACGTCTCTCCGCCTCTTGGCTATAGTTTTGCTTCTCCTCAGCCATGCGATCTTCGGGAGGTTTTAGGTGAACGTCCTCTAGAAAAAGAA-ACCGCTTTAGATATTAACAAATGCAGAAAATGAATCAGCATATTCAGCATTCGGGAAAGTGGATTGTTCCAGAACCCAGGATCCTGTAGAGGGAAATAACACTAACCTTGTCCTTGTTACGGGTTTGAA--ACACCCG--CCATCAAGCCTGAGAGCTG-ACCCCAGGCCTGCACAC-TGGCGGTAACAAGCCTCAGGCCTGTGTGTGC--AGGAACCC--ACAG--CTCAAGCCCCATT-CCAGCCCCC-TGC i calJac3.chr4 C 0 I 693 s canFam3.chr1 56170391 613 + 122678785 GCTGTGTGGCCCCCT-----------------------TGTTGCCAGCCCCTCTCACAGGGA---------GGCAGCAGGAGCTTGGAACCGCGTTCCACACCTCTCAGTCTATATGGATAATATTTCCAAAAACTGAAAGATTAAATAGGAGCATTTGGTTTGCCCCCACAATATGTTTCTCCCAGTTG-AATTAATTTGGGGTGA--TGCACTTT--CTCAGATGGAGAAACGAGACCTGGTCTTGGAGGAGCGGTGTTGGACTC-CGACCCGTGCC---CTCTACCCAGGACATCC------------CTGGCGTCCGCTCCTCCAACGGGCCTCAGCGCTGATGTTGCTG-GTTTCTGACCTGTAGGGTCAATGGGGTCTGACTGCACAATCTTCAGT-TTTCTTAGAAGAACTTTATCCTGAAGAAGAATATGACTTCAGATATTTACAAAAGAGG-GAATGAATCACTTCATCCATCACTGGGGAAGCTGAACTGTTTCAGAATCCAGGATCCCACAGACTGAAATCACACTTCCCTTGTCATTGATAAGGGATGGGACGGCTTCTGCTCCACTGGGCCTG----CTCCCACCCACGACCTCACCCACAACGG----GTG-GAAATG-----GCATCATTCAGAAACCCAGGAATGCCCCATCATCGGTGTCATCTC------ i canFam3.chr1 I 4699 C 0 a score=2474568.000000 s hg38.chr6_KB021644v2_alt 98145 827 + 185823 CTCCCTGGGCGCTGTGGTTGGTGAACCCCAGTGGGCTGTTTAGGTGTTGAACTTGTACATAACTTGTACATGTGCAATCTTTGTATTTGTAATCAGAATTGCTCAATACCTCCCCTT----------------CCCTTAGACTATATTAGATAATTTGCACCATGAGTGACATTTGCAAAACTTTAAGAGGTTTTTCCTAAACC-ATGAGACTGCACATTTGCTAAGGCCCCT----TGTAAGTGGCTGAGTAGGCTCCTAAGCG--CCTCCA-CCCCGAGGCAGGGGCAAAATCACATCTTAAAACTTTAAGTCTCATAATACTTTATGAAATAATGCAGGGTGTGTAA-CCTGCATTCATTTATATGGTATTTAAAATT-AATATTCTGAGTCAAATTTAATTTAACTTGAACCAGCTGTCAGCCCAAACAGCTTTCTTTCATTTTTTGAATTTCAGTACAC-CAACGATCATTGT-AAACATTTCCACCCAAACTT--CTTCACATAAGTG--ATGATTAATT-CCCGTGTATCACTTTGTTCCTCGGTGATCACAAATTGCATTACACTCAAATTTCACTTAGTGAAAAAGGATGTTAATTTTTCCAGTTCCTATGATTC--TAGAATGGAAACACTTTTGGGAGTATTATTTCAAGATCTTGGGACCAGCAGTGAGGGATTTTAGAGTT----------------------------------------AAAGAATGGCTTGGCAGAGATACTTCCCATTG-TTTTATCCACT---GGAAGTTTGA-ATAGTGTGATGGGTAATGGGCAGAAGAGAATAAAGCCTATTTCTCTTCTCTCAGAATTTGTGTATTAAAGGGACAATGTACACAAC---------CCCATTCCTCAGGATGCCAG----------CCCACTGGG s panTro4.chr6 170681642 829 + 172623881 CTCCCTCGGTGCTGTGGTTAGTGAACCCCAGTGGGCTGTTTAGGTGTTGAACTTGTACATAACTTGTACATGTGCAATCTTTGTATTTGTAATCAGAATTGTTCAATACGTCCCCTT----------------CCCTTAGACTATAGTAGATAATTTGCACCATGAGTGACATTTGCAAAACTTTAAGAGGTTTTTCCTAAACC-ATGAGACTGCACATTTGCTAAGGCCCCT----TGTAAGTGGCTGAGTAGGCTCCTAAGCG--CCTCCA-CCCCGAGGCAGGGGCAAAATCACATCTTAAAACTTTAAGTCTCATAATACTTTATGAAATAATGCAGGGTGTGTAA-CCTGCATTCATTTATATGGTATTTAAAATT-AATATTCTGAGTCAAATTTAATTTAACTTGAACCAGCTGTCAGCCCAAACAGCTTTCTTTCATTTTTTGAATTTCAGTACAC-CAACGATCATTGT-AAACATTTCCACCCAAACTT--CTTCACATACGCG--ATGATTAATT-CCCGTGTATCACTTTGTTCCTCGGTGATCACAAATTGCATTACACTCAAATTTCACTTAGTGAAAAAGGATGTTAATTTTTCCAGTTCCTATGATTCTATAGAATGGAAACACTTTTGGGAGTATTATTTCAAGATCTTGTGACCAGCAGTGAGGGATTTTAGAGTT----------------------------------------AAAGAATGGCTTGGCAGAGATACTTCCCATTG-TTTTATCCACT---GGAAGTTTGA-ACAGTGTGATGGGTAATGGACAGAAGAGAATAAAGCCTATTTCTGTTCTCTCAGAATTTGTGTATTAAAGGGACAATGTACACAAC---------CCCATTCCTCAGGATGCCAG----------CCCACTGGG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172431154 828 + 174210431 CTCCCTAGGCACTGTGGTTAGTGAACCCCAGTGGGCTGTTTAGGTGTTGAACTTGTACATAACTTGTACATGTGCATTCTTTGTATTTGTAATCAGAATTGCTCAATACCTTGCCTT----------------CCCTTAGACTATAGTAGATAATCTGCACCATGAGTGACATTTGCAAAACTTTAAGAGGTTTTTCCTAAACC-ATGAGACTGCACGTTTGCTAAGGCCCCT----TGTAAGGGGCTGAGTAGGCTCCTAAGCG--CCCCCA-CCCCGAGGCAGGGGCAAAATCATATCTTAAAACTTTAAGTCTCGTAATACTTTATGAAATAATGCAGGGTGTGTAA-CCTGCATTCATTTATATGGTATTTAAAATT-AATATTCTGAGTCAAATTTAATTTAACTTGAACCAGCTGTCAGCCCAAACAGCTTTCTTTCATTTTTTAAATTTCAGTACAC-CAACGATCATTGTAAAACACTTCTACCCAAACTT--CTTCACATACGTG--ATGATTAATT-CCCCTGTATCGCTTTGTTCCTCGGTGATCACAAATTGCATTACACTCAAATTTCACTTAGTGAAAAAGGATGTTAATTTTTCCAGTTCCTATGATTC--TAGAATGGAAACACTTTTGGGAGTGTTATTTCAAGATCTTGTGACCAGCAGCAAGGGATTTTAGAGTT----------------------------------------AAAGAATGACTTGGCAGAGATATTTCCCATTG-TTTTATCCACT---GGACGTTTGA-ATAGTGTGATGGGTAATGGACAGAAGAGAATAAAGCCTATTTCTGTTCTCTCAGAATTTGTGTATTAAAGGGACAATGTACACAAC---------CCCATTCCTCAGGATGCCAG----------CCCACTGGG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156295118 827 + 157873769 CTCCCTGGGCGCTGTGGTTAGTGAACCCCGGTGGGCTGTTTAGGTGTTGAACTTGTACATAACTTGTACATGTGCAATCTTTGTATTTGTAATCAGAATTGCTCAATACCTCCCTTT----------------CCCTTAGACTATAGTAGATAATCTGCACCATGAGTGACATTTGCAAAACTGTAAGAGGTTTTTCCTAAACC-ATCAGACTGCACATTTGCTAATGCCCCT----TGTAAGGGGCTGAGTAGGCTCCTAAGCG--CCCCCA-CCCTGAGGCAGGGGCAAAATCACATCTTAAAACTTTAAGTCTCATAATACCTTATGAAATAGTGCAGGGTGTGTAA-CCTGCATTCATTTATATGGTATTTAAAATT-AATATTCTGAGTTAAATTTAATTTAACTTGAACCAGCTGTCAGCCCAAACAGCTTTGTTTCGTTTTTTAAATTTCAGTACAC-CAACGATCATTGT-AAACACTTCCACCCAAACTT--CTTCACATACGTG--ATGATTAATT-CCCCTGTATCGCTTTGTTCCTTGGTCATCACAAATTGCATTACACTCAAATTTCACTTAGTGAAAAAGGATCTTAATTTTTCCAGTTCCTATGATTC--TAGAATGGAAACACTTTTGGGAGTATTATTTCAAGATCTTATGACCAGCAGCAAGGGATTTTAGAGTT----------------------------------------AAAGAATGACTTGGCAGAGATATTTCCCATTG-TTTTATCCACT---GGAAGTTTGA-ATACTGTGATGGGTAATGGGCAGAAGAGAATAAAGCCTATTTCTGTTCTCTCAGAATTTGTGTATTAAAGGGACAATGTACACAAC---------CCCATTCCTCAGGATGCCAG----------CCCACTGGG i nomLeu3.chr3 C 0 I 26 s rheMac3.chr4 168115558 837 + 169853907 CTCCCTGGGTGCTGTGGTCAGTGAACCCCAGTGGGCTGTTTAGATGTTGGACTTGTACATAACTTGTACATGAGCAGTCTTTGTATTTGTAATCAGAATTGCTCAACACCTCCCCTT----------------CCCTTAGACTATAGTAGATAATCTGCACCATGAGTGACATTTGTAAAACTCTAATAGGTTTTTCCTAAACC-ACGAGGCTGCACGTTTGCTAAGGCCCCT----TGTAAGGGGCTGAGTAGGCTCCTAAGCG--CCCCCA-CCCCGGGGAAGGGGCAAAATCACATCTTAAAACTTTAAGTCTCATAATACTTTATGAAATAATGCAGGGTGTGTAA-CCTGCATTCATTTATATGGTATTTAAAATT-AATATTCTGAGTCAAATTTAATTTAACTTGAACCAGCTGTCAGCCCAAACAGCTTTCTTTCATTTTTCAAATTTCAGTACAC-CAAAGATTATTGC-AAACACTTCCACCCAAACTT--CTTCACGTACGTG--ATGATTAATT-CCCTTGTCTCGCTTTGTTCCTCAGTGATCACAAATTGCGTTACACTCAAATTTCACTTAGTGAAAAGGGATGTTAATTTCTCCAGTTCCCATGATTC--TAGAATGGGAACACTCTGGGGAGTATTATTTCAAGATCTTATGACCAGCAGCAAGGGATTGTAGAGTT----------------------------------------AAAGAATGATTTGGCAGAGATATTTCCCATTG-TTCTATCCACT---GGGAGTTTGA-ATAGTGTGGTGGGTAATGGACAGAAGAGAAGAAAGCCTGTTTCTGTTCTCTCAGAATTTGTGTATTAAGGCGACAATGTATACAAC---------CCCATTCCTCGGGATGCCAGTGGATGCCACCCCACTGGG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169070482 837 - 170955103 CTCCCTGGGCGCTGTGGTCAGTGAACCCCAGTGGGCTGTTTAGATGTTGGACTTGTACATAACTTGTACATGAGCAGTCTTTGTATTTGTAATCAGAATTGCTCAACACCTCCCCTT----------------CCCTTAGACTATAGTAGATAATCTGCACCATGAGTGACATTTGTAAAACTCTAATAGGTTTTTCCTAAACC-ACGAGGCTGCACGTTTGCTAAGGCCCCT----TGTAAGGGGCTGAGTAGGCTCCTAAGCG--CCCCCA-CCCCGGGGAAGGGGCAAAATCACATCTTAAAACTTTAAGTCTCATAATACTTTATGAAATAATGCAGGGTGTGTAA-CCTGCATTCATTTATATGGTATTTAAAATT-AATATTCTGAGTCAAATTTAATTTAACTTGAACCAGCTGTCAGCCCAAACAGCTTTCTTTCATTTTTCAAATTTCAGTACAC-CAAAGATTATTGC-AAACACTTCCACCCAAACTT--CTTCACGTACGTG--ATGATTAATT-CCCTTGTCTCGCTTTGTTCCTCAGTGATCACAAATTGCGTTACACTCAAATTTCACTTAGTGAAAAGGGATGTTAATTTCTCCAGTTCCCATGATTC--TAGAATGGGAACACTCTGGGGAGTATTATTTCAAGATCTTATGACCAGCAGCAAGGGATTGTAGAGTT----------------------------------------AAAGAATGATTTGGCAGAGATATTTCCCATTG-TTCTATCCACT---GGGAGTTTGA-ATAGTGTGGTGGGTAATGGACAGAAGAGAAGAAAGCCTGTTTCTGTTCTCTCAGAATTTGTGTATTAAGGGCACAATGTATACAAC---------CCCATTCCTCAGGATGCCAGTGGATGCCACCCCACTGGG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163888643 836 + 165299245 CTCCCTGGGCGCTGTGGTCAGTGAACCCCAGTGGGCTGTTTAGGTGTTGAACTTGTACATAACTTGTACATGAGCAGTCTTTGTATTTGTAATCAGAATTGCTCAACACCTCCCCTT----------------CCCTTAGACTATAGTGGGTAATCTGCACCATGAGTGACATTTGTAAAACTCTAATAGG-TTTTCCTAAACC-ACGAGGCTGCACGTTTGCTAAGGTCCCT----TGTAAGGGGCTGAGTAGGCTCCTAAGCG--CCCCCA-CCCCGGGGAAGGGGCAAAATCACATCTTAAAACTTTAAGTCTCATAATACTTTATGAAATAATGCAGGGTGTGTAA-CCTGCATTCATTTATAtggtatttaaaatt-aatattctgagtcaaatttaatttaacttgAACCAGCTGTCAGCCCAAAcagctttctttcatttttcaaatttcagtACAC-CAAAGATCATTGC-AAACACTTCCACCCAAACTT--CTTCACGTACGTG--ATGATTAATT-CCCTTGTCTCGCTTTGTTCCTCAGTGATCACAAATTGCGTTACACTCAAATTTCACTTCGTGAAAAGGGATGTTAATTTTTCCAGTTCCCACGATTC--CAGAATGGGAACACTTTGGGGAGTATTATTTCAAGATCTTATGACCAGCAGCAAGGGATTGTAGAGTT----------------------------------------AGAGAACGATTTGGCAGAGATATTTCCCATTG-TTCTATCCACT---GGGAGTTTGA-ATAGTGTGGTGGGTAAtggacagaagagaagaaagccTATTTCTGTTCTCTCAGAATTTGTGTATTAAGGGGACAGTGTATACAAC---------CCCATTCCTCAGGACGCCAGTGGATGCCACCTCACTGGG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96666093 802 + 98384682 CTCCCTGGGTGCTGTGGTCAGTGAACCCCAGTGGGCTGTTTAGGTGTTGGACTTGTACATAACTTGTACATGAGCAGTCTTTGTATTTGTAATCAGAATTGCTCAACACCTCCCCTT----------------CCCTTAGACTATAGTAGATAATCTGCACCATGAGTGACATTT------------------------------------CTGCATGTTTGCTAAGGTCCCT----TGTAAGGGGCTGAGTAGGCTCCTAAGCG--CCCCCA-CCCCAGGGCAGGGGCAAAATCACATCTTAAAACTTTAAGTCTCATAATACTTTATGAAATAATGCAGGGTGTGTAA-CCTGCATTCATTTATATGGTATTTAAAATT-AATATTCTGAGTCAAATTTAATTTAACTTGAACCAGCTGTCAGCCCAAACAGCTTTCTTTCATTTTTTAAATTTCGGTACAC-CAAAGATCGTTGT-AAACGCTTCCACCCAAACTT--CTTCATGTACGTG--ATGATTAATT-CCCCTGTCTCGCTTTGTTCCTCGGTGATCACAAATTGCGTTACACTCAAATTTCACTTAGTGAAAAGGGATGTTAATTATTCCAGTTCCCATGATTC--TAGAATGGAAACACTTTGGGGAATATTATTTCAAGATCTTATGACCAGCAGCAAGGGATTGTAGAGTT----------------------------------------AAAGAATGATTTGGCAGGGATATTTCCCATTG-TTCTATCCTCT---GGAAGTTTGA-ATAGTGTGGTGGGTAATGGACAGAAGAGAAGAAAGCCTATTTCTGTTCTCTCAGAATTTGTGTATTAAGGGGACAATGTACATAAC---------CCCACTCCTCAGGACGCCAGTGGATGCCACCCCACTGGG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169876918 859 + 171630274 CTCCCTGATGGCTGAGGCTGGTGAACCCCAGTGGGTTGTGGAGTTGTTG-----------AATCTGCACACGTGCGGTATTTGTATTTCTCATTAGAATTGTTCAGTGCCTC-CCTT----------------CCCTTAGACTATAGTAAAGAATCTGCCCCATGATTGACATTTGCAAAACTTC-AGATGTTTTTCCGAAACC-ACGAGGCTGCACATTTGCTGAGGCCCCT----AGTAAGGGGCTGAGTAGGCTCCTAAGCGGTCCCCTACCCCCGGGGCAGGGGCAAAATCACATCTGAAAACTTTAAGTCTCATAATCCTTTATGAAATAATGCAGACTGTGTAAGCTTGCATTCATTTATATGGCATTTAAAATT-AATGCTCTGGGTCCAATTTAATTTAACGTGAACCAGCTGTCAGCCCAAACAGATTTCTTTTATTTTTC-AATTTCAGTTCTC-TGCAGAGCACTGT-AAACACGTCCATCCACACTT--CTGCACACACGTGACATGAGGAGCC-CCCTTGTCTCCGCTTGTTCCTCAGTGA-----------ATCACACTCAATTTTAACTTAGTGAAGAAAGATGTTAATTTTTCCAGTCCCCATGATTC--TAGAATGAAAACACTTTTGGGAGTATTGCTTCAAGATTTCATGACC-GCAGCAAGGGATCTTAGCGTGTTCTTCACATGTGCCCCAAACCTAAAATGCAATTTAAAAAAAAGAATGACTTGGCAGAGAGAGTTCCCATTG-TTTTCTCCACT---GGAGGTTTGA-ATGGTGTGATGGGTCCTCAGCAGAGGAGAAGAAGGAGGATTTCTCTTCCCTCGGAATTTGTGTATCAAAGCGACGGCACACACAGCCACGTTCCTCACATTCCTCAAGATGCCAC-------AACCCTACAGGG i calJac3.chr4 I 693 C 0 s canFam3.chr1 56171004 739 + 122678785 --------------------------CCCTCTGGGCTG---------------------------------------CATCTGTATTTGCCATCAGGATTCCCCAGTGTCTTCCTTTCCTTCCCCCAAACACGCCCCTAGAAAATGGCACAGAATCTG-ATCATG----------GCAAAATCAC-ATACATATTTCTTAGGCCTATGGGACCTCATGAC-----ATGCTCTTGGTCTGCGGGTGGCCGGG-GGGCGTCCAGGCA---------CACAGGGCCTTGGGTCAGGTGACATCCG------------CTCGTG---CTCTACAGAACGAGGCAGA--GCATAA-TCTGTATTCTTTTACAGAGAATTTACGTCTGGGTATTCCGAGTCAGAATTACTTTAACGTGAACCAGCTGTCAGCC------GTCTTCTTCTGCTGCT---GCTTCAATACACACTAACGTCGCTGT-AAATGTTTCTACTCGGACTTTGCTCCACACTCATAATATAATTAATTATCCTTGTCTCATCCTCTTCCCTGGTGATCGCAAATTACATTACATTCAAATTCAACTTAGTGGAAAAGAATGTTAATTTTTCCAAAGTCCATTATTC--TAGAATGGAAACACTTATGTG-GTATTGTTTCAAAATTTCAAAATCAACAAAAAGGGATTTT---TCT----------------------------------------AAAGAGCGAC-TGGCAGGGGTATTTCTTGTTGCTTTTCTTCATTTCAAGAAGTTTCACGTGGTGTGATGGGTAATGTACAGAATAGAATCAAATCCCTCTCTCTTCCCTCTGCGTTTACGTGTGAAGTGTGTGAGATACACACA---------CGCATTTCTCAGGATGGCAA-----------CTACTGTG i canFam3.chr1 C 0 I 2 a score=36521.000000 s hg38.chr6_KB021644v2_alt 98972 27 + 185823 TGTTATTCATTTGTCAGggacg----------tcatc s panTro4.chr6 170682471 27 + 172623881 TGTTATTCATTTGTCAGGGACG----------TCATC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172431982 27 + 174210431 TGTTATTCATTTGTCACAGATG----------TCATC i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168116395 27 + 169853907 TGTTTTTTATTCATCAGGGACG----------TCATC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169071319 27 - 170955103 TGTTTTTTATTCATCAGGGACG----------TCATC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163889479 27 + 165299245 TGTTTTTCATTCATCAGGGACG----------TCATC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96666895 15 + 98384682 TGTTTTTCAT----------------------TCATC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169877777 27 + 171630274 TGTGAGTCACTCCTCTGGGATA----------TCATC i calJac3.chr4 C 0 C 0 s canFam3.chr1 56171745 37 + 122678785 TTTTATGGGCACGATGGGGACGAGGGGGGTTCTTGTC i canFam3.chr1 I 2 I 2 e nomLeu3.chr3 156295945 26 + 157873769 I a score=75973.000000 s hg38.chr6_KB021644v2_alt 98999 28 + 185823 cagttagaaaagctcagcaactgacctt s panTro4.chr6 170682498 28 + 172623881 CAGTTAGAAAAGCTCAGCAACTGACCTT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172432009 28 + 174210431 CAGTTAGAAAAGCTCAGCGACTGACCTT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156295971 28 + 157873769 gagaaagaAAAGCTCAGCGACTGACCTT i nomLeu3.chr3 I 26 C 0 s rheMac3.chr4 168116422 28 + 169853907 CAGTTAGAAAAGCTCAGCGACTGACCTT i rheMac3.chr4 C 0 I 172 s macFas5.chr4 169071346 28 - 170955103 CAGTTAGAAAAGCTCAGCGACTGACCTT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163889506 28 + 165299245 CAGTTAGAAAAGCTCAGCGACTGACCTT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96666910 28 + 98384682 CAGTTAGAAAACCTCAACGACTGACCTT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169877804 26 + 171630274 CATATTAAAAAGCTCCGGGACTGCCT-- i calJac3.chr4 C 0 C 0 s canFam3.chr1 56171784 28 + 122678785 CAGGCTGGAAAGCTGAATTACTGATTTC i canFam3.chr1 I 2 C 0 a score=13423.000000 s hg38.chr6_KB021644v2_alt 99027 18 + 185823 gtgctggctgctatc--tat s panTro4.chr6 170682526 18 + 172623881 GTGCTGGCTGCTATC--TAT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172432037 18 + 174210431 GTGCTGGCTGCTACC--TAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156295999 18 + 157873769 GTGCTGGCTGCTACC--TAC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169071374 14 - 170955103 GTGCT-GCTGCTGCC----- i macFas5.chr4 C 0 I 10 s papAnu2.chr4 163889534 16 + 165299245 GTGCT-GCTGCtgccta--- i papAnu2.chr4 C 0 I 2 s chlSab2.chr13 96666938 14 + 98384682 GTGCT-GCTGCTGCC----- i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56171812 18 + 122678785 CTGCTTACTACCCCT--TAC i canFam3.chr1 C 0 I 18 e calJac3.chr4 169877830 0 + 171630274 C e rheMac3.chr4 168116450 172 + 169853907 I a score=207.000000 s hg38.chr6_KB021644v2_alt 99045 1 + 185823 g s panTro4.chr6 170682544 1 + 172623881 G i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172432055 1 + 174210431 a i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156296017 1 + 157873769 g i nomLeu3.chr3 C 0 C 0 e calJac3.chr4 169877830 0 + 171630274 C e canFam3.chr1 56171830 18 + 122678785 I e chlSab2.chr13 96666952 0 + 98384682 C e papAnu2.chr4 163889550 2 + 165299245 I e rheMac3.chr4 168116450 172 + 169853907 I e macFas5.chr4 169071388 10 - 170955103 I a score=45685.000000 s hg38.chr6_KB021644v2_alt 99046 36 + 185823 gag--agagagagag----------agagagagagagagagggaggga s panTro4.chr6 170682545 38 + 172623881 gagaaagagagagag----------agagagagagagagagggaggga i panTro4.chr6 C 0 M 416 s ponAbe2.chr6 172432056 34 + 174210431 g----agagagagag----------agagggagggaaggagggaggga i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156296018 48 + 157873769 gtggggggggggggggtgtgggggCagcgagagagagaaagagagaga i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168116622 36 + 169853907 --gagagagagaggg----------agagagagagacacagagaggga i rheMac3.chr4 I 172 C 0 s macFas5.chr4 169071398 36 - 170955103 --gagagaaagggag----------agagagaaagagactgagagaga i macFas5.chr4 I 10 C 0 s papAnu2.chr4 163889552 36 + 165299245 --gagagagagagaa----------agagagagagaaagagacagaga i papAnu2.chr4 I 2 C 0 s chlSab2.chr13 96666952 20 + 98384682 --gagagagagagaa----------aggga----------------ga i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169877830 31 + 171630274 -------ggagggag----------ggagggaggcggggagggaggga i calJac3.chr4 C 0 C 0 e canFam3.chr1 56171830 18 + 122678785 I a score=7660.000000 s hg38.chr6_KB021644v2_alt 99082 4 + 185823 agga s ponAbe2.chr6 172432090 4 + 174210431 gaga i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156296066 4 + 157873769 gaga i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168116658 4 + 169853907 gaga i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169071434 4 - 170955103 gaga i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163889588 4 + 165299245 gaga i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96666972 4 + 98384682 gaga i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169877861 4 + 171630274 agga i calJac3.chr4 C 0 C 0 e canFam3.chr1 56171830 18 + 122678785 I e panTro4.chr6 170682583 416 + 172623881 M a score=33035.000000 s hg38.chr6_KB021644v2_alt 99086 43 + 185823 gagagagagaaagagacagagagagatggagaa------agagacagag s ponAbe2.chr6 172432094 41 + 174210431 gagacagagacagagaaagagataga--gagag------agggagagac i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156296070 43 + 157873769 gagagagagaaagagagagagagggagagagaa------agagacacag i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168116662 46 + 169853907 gaaagagagacagagatagtgagagaaagagat---gggggagagagag i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169071438 49 - 170955103 gaaagacacacacacagagagagagaaagacacacagagagagagagag i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163889592 43 + 165299245 gagagacacacacacacacagagcgaacgagac------acagagagag i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96666976 47 + 98384682 gaaagagacacacacacacacagagaaagagac--agagagagagagag i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169877865 0 + 171630274 C e canFam3.chr1 56171830 18 + 122678785 I e panTro4.chr6 170682583 416 + 172623881 M a score=61163.000000 s hg38.chr6_KB021644v2_alt 99129 31 + 185823 agagggagagagagaaagagagagagacaga s panTro4.chr6 170683001 31 + 172623881 agagagagagagagaaagagagagagacaga i panTro4.chr6 M 416 I 2 s ponAbe2.chr6 172432135 31 + 174210431 agagggagagagagagggagagacagacaga i ponAbe2.chr6 C 0 I 17 s nomLeu3.chr3 156296113 31 + 157873769 agagagaaagagagacagggagagagagaga i nomLeu3.chr3 C 0 I 2 s rheMac3.chr4 168116708 31 + 169853907 agggagagagagagactgagagagaaagaga i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169071487 31 - 170955103 agagaaagggggagagagagagagagagaga i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163889635 31 + 165299245 agagaaagggagagagagagagagaaagaga i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96667023 31 + 98384682 agagaaagggagagagagagagagaaagaga i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169877865 0 + 171630274 C e canFam3.chr1 56171830 18 + 122678785 I a score=35028.000000 s hg38.chr6_KB021644v2_alt 99160 30 + 185823 aagagacggag--agagagggagagagagaga s panTro4.chr6 170683034 28 + 172623881 aagagacggag--agagagggagagagaga-- i panTro4.chr6 I 2 C 0 s nomLeu3.chr3 156296146 30 + 157873769 aagagacagag--agagagagagagagagaga i nomLeu3.chr3 I 2 C 0 s rheMac3.chr4 168116739 30 + 169853907 aagggatagag--agagagagggagagagaga i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169071518 32 - 170955103 aagggagagagacagagaaaggaagagagaga i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163889666 30 + 165299245 cagagagagag--aaagcgacacagagagaga i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96667054 30 + 98384682 cagagagagag--aaagagacacagagagaga i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169877865 0 + 171630274 C e canFam3.chr1 56171830 18 + 122678785 I e ponAbe2.chr6 172432166 17 + 174210431 I a score=53351.000000 s hg38.chr6_KB021644v2_alt 99190 86 + 185823 aggagagagaaagagacggagagagagagagagggagaga-----gag--------agagagaaaaagaaag--agacagagaaagacagggagagagaga s panTro4.chr6 170683062 94 + 172623881 aggagagagaaagagacggagagagagagggagagagaga-----gagggagggagagagagagagagaaag--agacagagaaagagagagggagagaga i panTro4.chr6 C 0 C 0 s rheMac3.chr4 168116769 84 + 169853907 --gggagagagagacagagagagaaagagagagggacaga-----gag--------agagagagggagagag--agagagggagagacagagaggcagaga i rheMac3.chr4 C 0 I 10 s macFas5.chr4 169071550 86 - 170955103 --gagagagagagaaagagacagagagaaagagacacaga-----gag--------agagagagaaagagagacagaaagtgagagaaagagatggggaga i macFas5.chr4 C 0 I 267 s papAnu2.chr4 163889696 48 + 165299245 --gagagaaagagagacagagagagagagagagagacagg-----gag--------agagaga-------------------------------------- i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96667084 91 + 98384682 --gagagagaaaaagagagacagagagtgagagaaagagacgggggag--------agagagacagagagagagggaaagacagagagagagaaggagaga i chlSab2.chr13 C 0 I 4 e calJac3.chr4 169877865 0 + 171630274 C e canFam3.chr1 56171830 18 + 122678785 I e nomLeu3.chr3 156296176 0 + 157873769 C e ponAbe2.chr6 172432166 17 + 174210431 I a score=522.000000 s hg38.chr6_KB021644v2_alt 99276 2 + 185823 ga s panTro4.chr6 170683156 2 + 172623881 gg i panTro4.chr6 C 0 C 0 s rheMac3.chr4 168116863 2 + 169853907 ca i rheMac3.chr4 I 10 C 0 s macFas5.chr4 169071903 2 - 170955103 ga i macFas5.chr4 I 267 C 0 s chlSab2.chr13 96667179 2 + 98384682 ga i chlSab2.chr13 I 4 I 9872 e calJac3.chr4 169877865 0 + 171630274 C e canFam3.chr1 56171830 18 + 122678785 I e papAnu2.chr4 163889744 0 + 165299245 C e nomLeu3.chr3 156296176 0 + 157873769 C e ponAbe2.chr6 172432166 17 + 174210431 I a score=6079.000000 s hg38.chr6_KB021644v2_alt 99278 15 + 185823 gacagagagacacac s panTro4.chr6 170683158 15 + 172623881 gagagagagagacag i panTro4.chr6 C 0 C 0 s rheMac3.chr4 168116865 15 + 169853907 gagagagagagacag i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169071905 15 - 170955103 gagagagagacagag i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163889744 7 + 165299245 --------gacagag i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169877865 0 + 171630274 C e canFam3.chr1 56171830 18 + 122678785 I e chlSab2.chr13 96667181 9872 + 98384682 I e nomLeu3.chr3 156296176 0 + 157873769 C e ponAbe2.chr6 172432166 17 + 174210431 I a score=1065.000000 s hg38.chr6_KB021644v2_alt 99293 1 + 185823 --a s panTro4.chr6 170683173 1 + 172623881 --a i panTro4.chr6 C 0 C 0 s rheMac3.chr4 168116880 1 + 169853907 --a i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169071920 1 - 170955103 --a i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163889751 1 + 165299245 --a i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96677053 3 + 98384682 aga i chlSab2.chr13 I 9872 C 0 e calJac3.chr4 169877865 0 + 171630274 C e canFam3.chr1 56171830 18 + 122678785 I e nomLeu3.chr3 156296176 0 + 157873769 C e ponAbe2.chr6 172432166 17 + 174210431 I a score=3854.000000 s hg38.chr6_KB021644v2_alt 99294 9 + 185823 --gagagagag s panTro4.chr6 170683174 9 + 172623881 --gagagtgtg i panTro4.chr6 C 0 C 0 s rheMac3.chr4 168116881 8 + 169853907 --gagagaga- i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169071921 8 - 170955103 --gagagaga- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163889752 8 + 165299245 --gagagtgt- i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96677056 8 + 98384682 --gagagaCt- i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169877865 10 + 171630274 gAAAGAAAGT- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56171830 18 + 122678785 I e nomLeu3.chr3 156296176 0 + 157873769 C e ponAbe2.chr6 172432166 17 + 174210431 I a score=273.000000 s hg38.chr6_KB021644v2_alt 99303 1 + 185823 t s panTro4.chr6 170683183 1 + 172623881 t i panTro4.chr6 C 0 C 0 s canFam3.chr1 56171848 1 + 122678785 T i canFam3.chr1 I 18 C 0 e calJac3.chr4 169877875 0 + 171630274 C e chlSab2.chr13 96677064 0 + 98384682 C e papAnu2.chr4 163889760 0 + 165299245 C e nomLeu3.chr3 156296176 0 + 157873769 C e rheMac3.chr4 168116889 0 + 169853907 C e ponAbe2.chr6 172432166 17 + 174210431 I e macFas5.chr4 169071929 0 - 170955103 C a score=28453.000000 s hg38.chr6_KB021644v2_alt 99304 17 + 185823 gtgtgtgtgtgtgtgta s panTro4.chr6 170683184 17 + 172623881 gtgtgtgtgggtgtgta i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156296176 17 + 157873769 gtgtgtgtgtgtgtgtg i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168116889 15 + 169853907 --gTGTGTGTGTGTGCG i rheMac3.chr4 C 0 I 1 s macFas5.chr4 169071929 15 - 170955103 --gTGTGTGTGTGTGCG i macFas5.chr4 C 0 I 1 s papAnu2.chr4 163889760 15 + 165299245 --gtgtgtgtgtgtgtg i papAnu2.chr4 C 0 I 2 s chlSab2.chr13 96677064 15 + 98384682 --gtgtgtgtgtgtgtg i chlSab2.chr13 C 0 I 2 s calJac3.chr4 169877875 7 + 171630274 --GTGCGTG-------- i calJac3.chr4 C 0 C 0 s canFam3.chr1 56171849 17 + 122678785 GCGTCTGTATGAATATG i canFam3.chr1 C 0 C 0 e ponAbe2.chr6 172432166 17 + 174210431 I a score=858762.000000 s hg38.chr6_KB021644v2_alt 99321 311 + 185823 tgtgtgtgcgtgtgATTTTTAAATTTTGGAAAGTCCTACCT-AAAAATAAGTTGCA-TATGCATTGCCAGCTCTTTAAAGCCAATCTGTGGATCTAAAACCATCCATTCACTTattccttcactgaagaagcactgatttagc----------gcctggaatgaccaggcactcagaacatcaacatgcagacgtg---gtttctgagctcaacatcacagCAGTGTCTTCTCACCAATATTCACAGAACAGCTAATCATTGAGAGGGGACCCAACTTATTCAGCGTttttacattt-----------------------------------------------tacattgaca---------------ttacatttta---cattagatt s panTro4.chr6 170683201 311 + 172623881 tgtgtgtgcgtgtgATTTTTAAATTTTGGAAAGTCCTACCT-AAAAATAAGTTGCA-TATGCATTGCCAGATCTTTAAAGCCAATCTGTGGATCTAAAACCATCCATTCACTTattccttcactgaagaagcactgatttagc----------gcctggaatgactgggcactcagaacatcaacatgcagacgtg---gtttctgagctcaacatcacagCAGTGTCTTCTCACCAATATTCACAGAACAGCTAATCATCGAGAGGAGACCCAACTTATTCAGCGTTTTTACATTT-----------------------------------------------TACATTGACA---------------TTACATTTTA---CATTAGATT i panTro4.chr6 C 0 I 12 s ponAbe2.chr6 172432183 311 + 174210431 TGTGTGTGTGTGTGATTTTTAAATTTTGGAAAGTCCTACTT-AATAATAAGTTGCA-TATGCATTGCCAGCTCTTTAAATCCAATCTGTGGATCTAAAACAATTCATTCACTTattccttcactgaagaagcactgatttagc----------acctggaatgaccaggcactcagaacatcaacatgcagacgtg---gtttctgagctcaacatcacagCAATGTCTTCTCACCAATGTTCACAGAACAGCTAATCATTGAGAGGAGACTCAATTTATTCAGGGTTTTTACATTT-----------------------------------------------TACATTGACA---------------TTACATTTTA---CATTAGATT i ponAbe2.chr6 I 17 C 0 s nomLeu3.chr3 156296193 310 + 157873769 tgtgtgtgtgtgtgATTTTTAAATTTTGGAAAGTCCTAC-T-AAAAATAAGTTGCA-TATGCATTGCCAGCTCTTTAAAGCCAATCTGTGGATCTAAAACAATCCGTTCACTTattccttcactgaagaagcactgatttagc----------gcctggaatgaccgggcactcggaacatcaacatacagacatg---gtttctgagctcaacatcacagCAATGTCTTCTCACCAATAGTCACAGAACAGCTAATCATTGAGAGGAGACCCAACTTATTCAGCGTttttacattt-----------------------------------------------tacgttgaca---------------ttacatttta---cattAGATT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168116905 306 + 169853907 -----GCGCGTGTAATTTTTAAATTTTGTAAAGTCTTACCT-AAAAATAAGTTGCA-TATACATCGCCAGCTCTTTAAAGTCAATCAATGGATCTCAAACAATTCATTCACTTGCtccttcactgaagaaacactgatttagc----------acctagaatgaccggacactcagaacatcaacatgcagacgtg---gtttctgagctcaacatcacagCAATGTCTTCTCACCAATATTCACAGAACAGCTAATCATTGAGAGGAGACCCAACCTATTCAGCGTTTTTACATTT-----------------------------------------------TACATTAACA---------------TTACATTTTA---CATTACATT i rheMac3.chr4 I 1 C 0 s macFas5.chr4 169071945 316 - 170955103 -----GCGCGTGTAATTTTTAAATTTTGGAAAGTCTTACCT-AAAAATAAGTTGCA-TATACATCGCCAGCTCTTTAAAGTCAATCAATGGATCTCAAACAATTCATTCACTTGCTCCTTCACTGAAGAAACACTGATTTAGCACCTAGAATGACCTAGAATGACCGGACACTCAGAACATCAACATGCAGACGTG---GTTTCTGAGCTCAACATCACAGCAATGTCTTCTCACCAATATTCACAGAACAGCTAATCATTGAGAAGAGACCCAACCTATTCAGCGTttttacattt-----------------------------------------------tacattaaca---------------ttacatttta---cattacatt i macFas5.chr4 I 1 C 0 s papAnu2.chr4 163889777 309 + 165299245 --tgtgtgcgtgtgatttttaaattttggaaagtcTTACCT-ACAAATAAGTTGCA-TATACATCGCCAGCTCTTTAAAGCCAATCAATGGATCTGAAACAATTCATTCACTTACTCCTTCACTGAAGAAGCACTGATTTAGC----------ACCTAGAATGACCAGACACTCAGAACATCAACATGCAGACGTG---GTTTCTGAGCTCAACATCACAGCAATGTCTTCTCACCAATATTCACAGAACAGCTAATCATTGAGAGGAGACCCAACCTATTcagcatttttacattt-----------------------------------------------tacattaaca---------------ttacatttta---cattaGATT i papAnu2.chr4 I 2 C 0 s chlSab2.chr13 96677081 309 + 98384682 --tgtgtgtgtgtgATTTTTAAATTTTGGAAAGTCTTACCT-AAAAATAAGTTGCA-TATACATTGCCAGCTCTTTAAAGCCAATCAATGGATCTCAAACAATTCATTCACTTACTCCTTCACTGAAGAAGCACTGATTTAGC----------ACCTAGAATGACCGGACACTCAGAACATCAACATGCAGACGTG---GTTTCTGAGCTCAACATCACAGCAATGTCTTCTCACCAATATTCACAGAACAGCTAATCATTGAGAGGAGACCCAACCTATTCGGCGTttttacattt-----------------------------------------------tacattaaca---------------ttacatttta---cattagatt i chlSab2.chr13 I 2 C 0 s calJac3.chr4 169877882 271 + 171630274 --------------ATTTTTAAACTTTGGAAAGTCCTACCT-AAAAGTAAGTTGCATTTTGCATTGCCAGCTATTTAAAGCCAACCTATGCATCTGAAACAATTCATTCACTCattcctttattgaagacgcgctgatttaac----------tcctggaataaccaggcactgggaacatgaacgtggagacacg---gtttctgggctcagcatcacagca---tcttctcactgat----acagaacagctaatc----agaGTAGAGTCAGCCTAGTCAGCATTGTCTCATTT-----------------------------------------------CACACTG----------------------------------TGGATT i calJac3.chr4 C 0 C 0 s canFam3.chr1 56171866 351 + 122678785 TGTATATATATATGATTTTTAAATTTCAGAAAGTCTTACCTAAAAAATAATTTGAT-GGCATCCCACTGGCTATTCCGAAGCAATCTACACATCTGACAGCATTCATTCA--------TTCACTCAGAAAGCATCCCTGCAGT----------GCGTGCCCTAACCACAGGCTGAGGACATAGACCTGGAGGCTTGGGCGTTTCTG--------------------CCCTTTGACGGATGCCCAGGGAAGAGCACATCACCGGGAGCGGGCCCAGTGCACTCCTTGGACTCCCATCTGGGAGGATGCAGCGGTGGTAACAGCACAAACGGTGGTATCAGCAGGATGCAGTGACAGTGTGAAAACACGGGTGAGGCCTCAGACCCTTGGAC- i canFam3.chr1 C 0 C 0 a score=52557.000000 s hg38.chr6_KB021644v2_alt 99632 19 + 185823 cctttccaAGG---GGAGTACC s ponAbe2.chr6 172432494 19 + 174210431 CCTTTCCAAGA---GGAGTACC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156296503 19 + 157873769 CCTTTCCAAGG---GGAGTACC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168117211 19 + 169853907 CCTTTCCAAGG---GGAGTACC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169072261 19 - 170955103 cctttccaAGG---GGAGTACC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163890086 19 + 165299245 CCTTTCCAAGG---GGAGTACC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96677390 19 + 98384682 cctttccaAGG---GGAGTACC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169878153 19 + 171630274 CCTTTCCAAGG---GGAGCACC i calJac3.chr4 C 0 C 0 s canFam3.chr1 56172217 22 + 122678785 CTTCTGTAAGGGACGGTGCACC i canFam3.chr1 C 0 C 0 e panTro4.chr6 170683512 12 + 172623881 I a score=394416.000000 s hg38.chr6_KB021644v2_alt 99651 158 + 185823 ATGTTGATAATGATG---GAAAAATGT-----ATCTGAGAAAAGTAAGTTGCAA--------------------------ATCTATGATTTGTTTCCAGAAGCTTGTTACCAC---------AG-CGGG------------CAAACTGA-TAACATTAAAGCATGT-------------------------------------------------TGACCATGCTTCAGATAAAGAATCAAGATCCCAATGAAGCTACACACTA s panTro4.chr6 170683524 207 + 172623881 ATGTTGATAATGATG---GAAAAATGT-----ATCTGAGAAATGTAAGTTGGAA--------------------------ATCTATGATTTGTTTCCAGAAGCTTGTTACCAC---------AG-CGGG------------CAAACTGA-TAACATTAAAGCATGTGACCATGCTGAATNNNNNNNNNNGGCAAACTGATACATTTAAAGCATGTTGACCATGCTTCAGATAAAGAATCATGATCCCAATGAAGCTACACACTA i panTro4.chr6 I 12 C 0 s ponAbe2.chr6 172432513 161 + 174210431 ATGTTGATAATGATGTAAAAAAAATGT-----ATCTGAGAAATGTAAGTTGGAA--------------------------ATCTATTATTTGTTTCTAGAAGCTTGTTACCAC---------AG-CAGG------------CAAACTGA-TAACATTAAAGCATGT-------------------------------------------------TGACCATGATTCAGATAAAGAATCAAGATCCCAATGAAGCTACACACCA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156296522 158 + 157873769 ATGTTGATAATGATG---GAAAAATGT-----ATCTGAGAAATGTAAATTCGAA--------------------------ATCTATGATTTGTTTCCAGAAGCTTGTTACCAC---------AG-CAGG------------GAACCTGA-TGACATTAAAGCATGT-------------------------------------------------TGACCATGATTCAGATAAAGAATCAAGATCCCAATGAAGCTACACACTA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168117230 152 + 169853907 ------AGGTTGATG---GAAAAATGT-----ATCTGAGAAATGTAAACTGGAA--------------------------ATCTGTGATTTATTTCCAGAAGCTTGTTACCAC---------AG-CGGG------------CAAAGTGA-AAACATTAAAGCATGT-------------------------------------------------TGACCATGACTCACGTAAAGAATCAAGATCCCAATGAAGCTACACACTA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169072280 152 - 170955103 ------AGGTTGATG---GAAAAATGT-----ATCTGAGAAATGTAAACTGGAA--------------------------ATCTGTGATTTATTTCCAGAAGCTTGTTACCAC---------AG-CGGG------------CAAAGTGA-AAACATTAAAGCATGT-------------------------------------------------TGACCATGACTCACGTAAAGAATCAAGATCCCAATGAAGCTACACACTA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163890105 152 + 165299245 ------ATGTTGATG---GAAAAATGT-----ATCTGAGAAACGTACACTGGAA--------------------------ATCTGTGATTTATTTCCAGAAGCTTGTTACCAC---------AG-CAGG------------CAAACTGA-AAACATTAAAGCATGT-------------------------------------------------TGACCATGATTCAGATAAAGAATCAAGATCCCAATGAAGCCACACACTA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96677409 152 + 98384682 ------ATGTTGATG---GAAAAATGT-----ATCTGAGAAATGCAAACTGGAA--------------------------ATCTGTGATTTATTTCCAGAAGCTTGTTACCAC---------AG-CAGG------------CAAACTGA-AAACATTAAAGCATGT-------------------------------------------------TGACCATGATTCAGACAAAGAATCAAGATCCCAATGAAGCCACACACTA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169878172 155 + 171630274 GTGTTGATAATGATG---GAAATATGT-----ACCTGAGAAATGTAAACTGGAA--------------------------ATCTATGATTTGTATCAAGAAGCTTGTTACCCC---------AGCCAGG------------CAGAGTGA-TGAAATCAGAGCATGT-------------------------------------------------TGGCCATGATTCACAC----AATCAAGATTCCAATGAAGACATGCACTA i calJac3.chr4 C 0 C 0 s canFam3.chr1 56172239 206 + 122678785 --ATTTAACTGAATGGGAGAGAAATGTCTACAACCTGCAGCATGTCTGCAGCAGTGAGTGCCCTCAGGCCAACAGGCGGCACCTGTAAT---------GAGGTTTGGCATCACCGACTACGGAG-CTGGGAGTTTTGTTCATAAAGTGGCTGACATCATGACGAGTGAC----------------------------------------------AGATCACAATTTGGATTCATAACCAAGGTTCCAATAAACTTATGTATTA i canFam3.chr1 C 0 I 37 a score=130170.000000 s hg38.chr6_KB021644v2_alt 99809 52 + 185823 GTTACTATTTTTTCCCTCCATCAAGAAACACTGAGTTGTGCTGTGACGGGTC s panTro4.chr6 170683731 50 + 172623881 GTTATTATTTTTTCCCTCCATCAAGAAAC--TGAGTCGTGCTGTGACGGGTC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172432674 52 + 174210431 GTTACTATTTTTTCTCTCCATCGAGAAACACTGAGTTGTGCTGTGACAGGTC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156296680 52 + 157873769 GTTACTGTTTTTTCCCTCCATCAAAAAACACTGAGTTGTGCTGTGACAGGTC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168117382 52 + 169853907 GTTACTACTTTTTCCCTTCATCAAGAAACACTGATTTGTGCTGTGAAGGGTC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169072432 52 - 170955103 GTTACTATTTTTTCCCTTCATCAAGAAACACTGATTTGTGCTGTGAAGGGTC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163890257 52 + 165299245 GTTACTATTTTTTCCCTCCATCAAGAAACACTGATTTGTGCTGTGAAGGGTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96677561 52 + 98384682 GTTACTATTTTTTCCCTCCATCAAGAAACACTGATTTGTGCTGTGAAGGGTC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169878327 47 + 171630274 GTTACTA-GGGCTCCCTCCATCCAGA----CTGATTTTTCCTGTGGAGGGTC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56172445 37 + 122678785 I a score=445993.000000 s hg38.chr6_KB021644v2_alt 99861 159 + 185823 AGGTGTCATGCTTCATGTTTTACATGCTAATTATAACTTTTGTA---AT----GTCATCATCATCACCATTGACTGCTGCTTCTGTATCAGGCAGTCTGTGTACCAAACAGCTAATCTTCCAATAGCATAGTAAGTGGTCTAGTTACCTGTCAGGGA----GGCACCAAG s panTro4.chr6 170683781 159 + 172623881 AGGTGTCATGCTTCATGTTTTACATGCTAATTATAACTTTTGTA---AT----GTCATCATCATCACCATTGACTGCTGCTTCTGTATCAGGCAGTCTGGGTACCAAACAGCTAATCTTCCAATAGCATAGTAAGTGGTCTAGTTATCTGGCAGGGA----GGCACCAAG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172432726 153 + 174210431 AGGTGTCATGCTTCATGTTTTACATGCTAATTATAACTTTTATA---AT----------ATGATCACCATTTACTGCTTCTTCTGTATCAGGCAGTCTGTGTACCAAACAGCTAATCTTCCAATAGCTTAGTAAGTGGTCTAGTTACCTGGCAGGGA----GGCACCAAG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156296732 159 + 157873769 AGGTGTCATGCTTCATGTTTTACATGCTAATTATAACTTTTATA---AT----ATAATCATCATCACCATTTACTACTTCTTCTGTATCAGGCAGTCTGTGTACCAAACAGCTAATCTTCCGACAGCACAGTAAGTGGTCTAGTTACCTGGCAGGGC----GGCACCAAG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168117434 163 + 169853907 AGGTGTCATGCTTCATGTTTTACATGCTAATTAGTACTTATATA---atcatcatcatcatcatcaccatTTACTGCTTCTTCTTTATCAGGCAGACTGTGTACCAGACAGGTAATCTTCTAATAGCATAGGAAGTGGTCTAGTTACCTGGCAGGGC----AGCACCAGG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169072484 166 - 170955103 AGGTGTCATGCTTCATGTTTTACATGCTAATTATAACTTATataatcatcatcatcatcatcatcaccatTTACTGCTTCTTCTTTATCAGGCAGACTGTGTACCAGACAGGTAATCTTCTAATAGCATAGGAAGTGGTCTAGTTACCTGGCAGGGC----AGCACCAGG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163890309 157 + 165299245 AGGTGTCATGCTTCATGTTTTACAGGCTAATTATAACTtatata---------atcatcatcatcaccgtTTACTGCTTCTTCTGTATCAGGCAGACTGTGTACCAGACAGCTAATCTTCTAATAGCATAGGAAGTGGTCTAGTTACCTGGCAGGGC----AGCACCAGG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96677613 163 + 98384682 AGGTGTCATGCTTCATGTTTTACATGTTAATTATAACTTATATA---ATCATCATCATCACCACCACCATTTACTGCTTCTTCTTTATCAGGCAGACTGTGTACCAGACAGCTAATCTTCTAATAGCATAGGAAGTGGTCTAGTTGCCTGGCAGGGC----AGCACCAGG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169878374 163 + 171630274 AGGTGTCATGCTTCATGtttattatgttaattattacttatata---at---tataataataGTCATCATTTACTGCTGCTTCTGTATCAGGCAGACTGGGTACCAAACGGCTAATCTTCCAATAGCATAGTAAGTGGCCTAGTTA-CTGGCAAGGCAGGGGGCACCAAG i calJac3.chr4 C 0 I 312 s canFam3.chr1 56172482 134 + 122678785 AAGCGTTATGCTTCCTGTCTTAC------------------GTA---------ACCATGACAGAGACCATGCACTGCCT-TCCTGCACCTGCTAGTCTGTGTACTG---AGCTGATCTTCTAGCGACAT-GCAAGCAATGTCCTCACCTGGCCGGTG----GACACCGAG i canFam3.chr1 I 37 C 0 a score=10152.000000 s hg38.chr6_KB021644v2_alt 100020 3 + 185823 CAA s panTro4.chr6 170683940 3 + 172623881 CAA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172432879 3 + 174210431 CAA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156296891 3 + 157873769 CAA i nomLeu3.chr3 C 0 I 460 s rheMac3.chr4 168117597 3 + 169853907 CAA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169072650 3 - 170955103 CAA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163890466 3 + 165299245 CAA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96677776 3 + 98384682 CAA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169878849 3 + 171630274 CAA i calJac3.chr4 I 312 C 0 e canFam3.chr1 56172616 0 + 122678785 C a score=1502352.000000 s hg38.chr6_KB021644v2_alt 100023 488 + 185823 CAATAGGTTCTTAATAAATACTCACCGAATGAACGATAGAATGG-TCATGCATGGCATGATAAGCAGAAAATAGGAGACTGTAATAGAGTCAAAATTAACTAATAGGAtatattagtcagggttctctggagaaacagaaccaacaggaaggagagagggagagagag--gggatctgctgtcaggaattggctcatgagattgctggagttaagtccaaaatctgcagaatagg-ctgcagactggag-cctggggagagctgatgttgcagcttgtaccc-gcggggagtctggaggcagaagtccttc---ctcaaggaatcaccaacttttttatcttaagtctccaaccacatggatgaggcccacccacgttacgg-aggtcccctgctttgctcaaagtttattgatttaaatgctaatctcatctaaaagataccttcatgccaacgtctagactgggctttgacc-catagctgggta--------cctggccaagcc s panTro4.chr6 170683943 493 + 172623881 CAATAGGTTCTTAATAAATACTCACCGAATGAACGATAGAATGG-TCATGCATGGCATGATAAGCAGAAAATAGGAGACTGTAATAGAGTCAAAATTAACTAATAGGAtatattagtcagggttctctggagaaacagaaccaacaggaaggagagagggagagagagaggggatctgctgtcaggaattggctcatgagattgctggagttaagtccaaaatctgcagaatagg-ctgcagactggag-cccggggagagctgatgttgcagcttgcaccc-gcggggagtctggaggcagaagtccttcttcctcaaggaatcaccaacttttttattttaagtctccaaccacatggatgaggccaacccacgttacgg-aggtcccctgctttgctcaaagtttattgatttaaatgctaatctcatctaaaagataccttcacgccaacgtctagactgggctttgacc-catagctgggta--------cctggccaagcc i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172432882 494 + 174210431 CAATAGATTCTTAATAAATACTCACCGAATGAACAATAGAATGGTTCATGCATGGCATGATAAGCAGAAAATAGGAGACTGTAATAGAGTCAAAATTAACTAATAGGAtatattagtcagggttctctggagaaacagaaccaacaggaaggagagagggagagagagaggggatctgctgtcaggaattggctcatgagattgctggagttaagtccaaaatctgcagaatagg-ctacagactggag-cccggggagagctgatgttgcagcttgcaccc-gtgtggagtctggaggcagaagtcctttttcctcaaagaatcaccaacttttttatcttaagtctccaaccacatggatggggcccacccacattatgg-aggtcccctgctttgctcaaagtttattgatttaaatgctaatctcatctaaaagataccttcatgccaacgtctagactgggctttgacc-cttagctgggta--------cctggccaagcc i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156297354 493 + 157873769 CAATAGATTCTTAATAAATACTCACCGAATGAACAATAGAATGGTTCAGGCATGGCATGATAAGCAGAAAATAGGAGATTGTAATAGAGTCAAAATTAACTAATAGGAtatattagtcagggttctctggagaaacagaaccaacaggaaggagagagggagagagagaggggatctgctgtcaggaattggctcatgagattgctggagttcagtccaaaatctgcagaatagg-ctgcagactggag-cccggggagagctgatgttgcagcttgcaccc-gcggggagtctggaggcataag-ccttcttcctcaaggaatcatcaacttttttatcttaagtctccaaccacatggatgagggccacccacgtaatgg-aggtcccctgctttgctcaaagtttattgatttaaatgctaatctcatctaaaagataccttcatgccaacgtctagactgggctttgacc-catagctgggta--------cctggccaagcc i nomLeu3.chr3 I 460 C 0 s rheMac3.chr4 168117600 493 + 169853907 CAACAGATTATTAATAAATACTCACCGAATGAACGACAGAATGGTTCGTGCATGGTGTGAT-AGCAGAAAACAGGAAACTATAATAGAGTCAGAATTAACTAATAGGAtgtattagtcagggttctctggagaaacagaagcaacaggaaggagagagagagagatagtgggaatctgctgccaggaattggctcatgagattggtggagttaagtccaaaatctgcagaacagg-ctgcagactggag-gccggggagagctgatgctgcagcttgcaccc-acggggagtctggaggcagaagtccttcttcctcaaggaatcaccgactttttaatcttaagtcttcaaccacatggatgaggcccacccacgttatgg-aggtcccctgcttcgctcaaagtttattgattcaaatgctaatctcatctaaaagatatcttaatgccagagtctagactttgcttttacc-cctaggtgggta--------cctggccaagca i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169072653 493 - 170955103 CAACAGATTATTAATAAATACTCACCGAATGAACGACAGAATGGTTCGTGCATGGTGTGAT-AGCAGAAAACAGGAAACTATAATAGAGTCAGAATTAACTAATAGGAtgtattagtcagggttctctggagaaacagaagcaacaggaaggagagagagagagatagtgggaatctgctgccaggaattggctcatgagattggtggagttaagtccaaaatctgcagaacagg-ctgcagactggag-gccggggagagctgatgctgcagcttgcaccc-acggggagtctggaggcagaagtccttcttcctcaaggaatcaccgactttttaatcttaagtcttcaaccacatggatgaggcccacccacgttatgg-aggtcccctgcttcgctcaaagtttattgattcaaatgctaatctcatctaaaagatatcttaatgccagagtctagactttgcttttacc-cctaggtgggta--------cctggccaagca i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163890469 487 + 165299245 CAACAGATTATTAATAAATA-TCACCGAATGAACGACAGAATGGTTCGTGCATGGCGTGAT-AGCAGAAAATAGGAAACTGTGATAGAGTCAGAATTAACCAGTaggatgtattagtcagggttctctggagA---AGAAGcaacaggaaggagagagggagag--agcggGAATCCGCTGCCAGGAATTGGCTCATGACATTGGTGGAGttaagtccaaaatctgcagaaCAGG-CTGCAGACTGGAG-CCCGGGGAGAGCTGATGTTGCAGCTTGCAGCC-GCGGGGAGTCTGGAGGCAGAAGTCCTTCTTCCTCAAGGAATCACCAACTTTTTAATCTTAAGTCTTCAACCACATGGATGAGGCCCAGCCACGTTATGG-AGGTCCCCTGCTTCGCTCAAAGTTtattgattcaaatgctaatctcatctaAAAGATACCTTAATGCCAAAGTCTAGACTTCGCTTTTACC-CCTAGGTGGGTA--------CCTGGCCAAGCA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96677779 493 + 98384682 CAACAGATTATTAATAAATACTCACCGAATGAACGATAGAATGGTTCGTGCATGGTGTGAT-AGCAGAAAATAGGAAACTATAATAGAGTCAGAATTAACTAATAGGAtgtattagtcagggttctctggagaaacagaaccaacaggaaggagagagggagagagagcgggaatctgctgtcaggaattggctcatgagattagtggagttaagtccaaaatctgcagaacagg-ctgcagactggag-cccggggagagctgatgttgcagcttgcaccc-acggggagtctggaggcagaagtccttcttcctcaaggaatcaccaactttttaatcttaagtcttcgaccacatggatgaggcccacccatgttatgg-aggtcccctgcttcgctcaaagtttattgattcaaatgctaatctcatctaaaagatatcttaatgccaaagtctggacttcgcttttacc-cctaggtgggta--------cctggccaagcT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169878852 490 + 171630274 CAATAGATTCTTAATAAATACTCAGCAGATGAACGACACACTGGTTCATGCACGGCATGAC-AGCAGAAAATGGGAGACTCTAATAGAGTCAGAATTAACTAACAGGGtgtatttgtcagggttctctggagaaacagacccgacagga--gaaagatggggagagagaggggatctgctgtcaggagttggctcatgaggttgctggggttaagtccgaaatctgcagaacagg-ctgcggaatgga--cccaggaagagctgaagctgcagcctgcacccggcggggaggctggaggcagaagtcctttttccacgaggaatcaccatctttttcatcttatgtcttcaaccacatggatgtggccca-ccacgttaatg-aggccctccgctttgctcaaattttattcatttaaatgctaatctcatctcaaagataccttgatggcaatatctagactgggctttgacc-catagctgggtg--------cctggccgcgcc i calJac3.chr4 C 0 C 0 s canFam3.chr1 56172616 466 + 122678785 TAATCGGTTCCTAGTGGATGCCTCGTGAATGAATGATTGGAGGGCCTAGGAGTGGGTTGGT-AGCAG-CAACAGACCACCGTAATGTGGTCAAACCTAAATTAAATGGtgtatcggccgggattctccagagaaacaaaaccaataggagggacagagggagggagagag---atggatgataaggatttggctcc--actatcgtgggg-----------acccacagggcagacctgcaagctgcagacccaggaggagctgagg-------------cc--------atcaggagg-agaattctctctt-cttgggggacctctgtctttttctctttagtacttcaactgattggatgtggcccaaccacattttggtgggtcatctgttttcctcaaattctaccaattaaaatattaatcatatctaaaaaatagcttcatagaaatgtctagactggtgtctgcccgaatatttgagcaccctgcaccctggcccagcc i canFam3.chr1 C 0 I 6728 a score=574263.000000 s hg38.chr6_KB021644v2_alt 100511 188 + 185823 CCTGGTTACCTGTGCAAGTAACCAACACAAATCGTGTACTAAGTACTGTGCACACC-GCAAGCTTACAATC--------------------------AGACCTGGCATCACAGCGGGTCTTTGTATGGTGACAGCACAGGCCTAAGGGAAAGGGGATTTACACCACATGGTTTATGTAGGGTGCAGGCCAAGCAAGTTCACAAGAGGCTGGTGCA s panTro4.chr6 170684436 188 + 172623881 CCTGGTTACCTGTGCAAGTAACCAACACAAATCGTGTACTAAGTACTGTGCACACC-GCAAGCTTACAATC--------------------------AGACCCGGCATCACAGCGGGTCTTTGTATGGTGACAGCATAGGCTTAAGGGAAAGGGGATTTACACCACATGGTTTATGTAGGGTGCAGGCCAAGCAAGTTCACGAGAGGCTGGTGCA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172433376 213 + 174210431 cttggttacctgtgcaagtaaccagcacaAATCGTGTACACAGTACTGTGCACACT-GCAAGCTCACAATC-GATAGGTCCTGCTTCCCAGGGTGAAAAGCCTGGCATCACAGCGGGACTTTGTATGGTCACAGCATAGGCTTAAGGGAAAGGGGATTTACTCCACATGGTTTGTGTAGGGTACAGGCCAAGCAAGTTCACAAGAGGCTGGTGCA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156297847 214 + 157873769 CCTGGTTACCTGTGCAAGTAACCAACACAAATCGTGTACACAGTACTGTGTACACC-ACAAGCTTACAATCCGATAGGTCCTGCCTCCCAGGGTGAAAAGCCTGGCATTACAGCGGGTCTTTGTATGGTGACAGCATAGGCTCAAGGGAAAGGGGATTTACTCCACATGGTTTGTGTAGGGTGCAGGCCAAGCAAGTTCACAAGAGGCTGGTGCA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168118093 213 + 169853907 cccggttacttgtgcaagtaaccaacacaAATCGTGTACACATTACTGTGCATGCC-GCAAGCTTACAATCGGATAGGTCCT-CTTCCCAGGGTGAAAAGCCTGGCATCACAGCAGGACTTTGTATGGTGACAGCATAGGCTTAAGGGAAAGGGGCTTTACTCTTCATGGTTTGTGTAGGATGCAGGCCAAGCACGTTCACAAGAGGCTGGTGCA i rheMac3.chr4 C 0 I 1 s macFas5.chr4 169073146 213 - 170955103 cccggttacttgtgcaagtaaccaacacaAATCGTGTACACATTACTGTGCACGCC-GCAAGCTTACAATCGGATAGGTCCT-CTTCCCAGGGTGAAAAGCCTGGCATCACAGCAGAACTTTGTATGGTGACAGCATAGGCTTAAGGGAAAGGGGGTTTACTCTTCATGGTTTGTGTAGGATGCAGGCCAAGCACGTTCACAAGAGGCTGGTGCA i macFas5.chr4 C 0 I 3 s papAnu2.chr4 163890956 214 + 165299245 CCCGGTTACCTGTGCAAGTAACCAACACAAATCGTGTACACATTACTGTGCACGCC-GCAAGCTTACAATCGGATAGGTCCTGCTTCCCAGGGTGAAAAGCCTGGCATCACAGCGGGACTTTGTACGGTGACAGCATAGGCTTAAGGGAAAGGGGGTTTACTCTTCATGGTTTGTGTAGGATGCAGGCCAAGCACGTTCACAAGAGGCTGGTGCA i papAnu2.chr4 C 0 I 1 s chlSab2.chr13 96678272 213 + 98384682 CCTGGTTACCTGTG-AAGTAACCAACACAAATCGTGTACACATTACTGTGCACGCC-GCAAGCTTACAATCAGATAGGTCCTGCTTCCCAGGGTGAAAAGCCTGGCATCACAGCGGGACTTTGTACAGTGACAGCATAGGCTTAAGGGAAAGGGGGTTTACTCTTCATGGTTTGTGTAGGATGCAGGCCAAGCAAGTTCACAAGAGGCTGGTGCA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169879342 215 + 171630274 CCTGGTTACCTGTGCATGTAACCAGCACAAATCGTGTACACACCACTGTGTACACCTGCAAGCTTACAATCGGATAGGTCCTGCTTCCCAGGGCGAAAAGCCTGGCATCACAGCAGGGCTGTGTACAGTGACAGCATGGGCTTGGGGAAAAGGGGGTTTACTCTGCATGGTTTGTGCAGGCTGCAGGCCAAGCAGGTTCACAGGTGGCTGGTACA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56173082 6728 + 122678785 I a score=-2860.000000 s hg38.chr6_KB021644v2_alt 100699 3 + 185823 GG-C s panTro4.chr6 170684624 3 + 172623881 GG-C i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172433589 3 + 174210431 GG-C i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156298061 3 + 157873769 GG-C i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168118307 2 + 169853907 GG-- i rheMac3.chr4 I 1 C 0 s papAnu2.chr4 163891171 2 + 165299245 GG-- i papAnu2.chr4 I 1 C 0 s chlSab2.chr13 96678485 3 + 98384682 GGA- i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169879557 3 + 171630274 GG-C i calJac3.chr4 C 0 C 0 e canFam3.chr1 56173082 6728 + 122678785 I e macFas5.chr4 169073359 3 - 170955103 I a score=88794.000000 s hg38.chr6_KB021644v2_alt 100702 32 + 185823 CCCTCGACTGAGCACTTAGCTTGGTGCAGGCC s panTro4.chr6 170684627 32 + 172623881 CCCTCGACTGAGCACTTAGCTTGGTGCAGGCC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172433592 32 + 174210431 CCCTCAGCTGAGCACTGAGCTTGGTGCAGGCC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156298064 32 + 157873769 CCCTCGGCTGAGAACCTAGCTTGGTGCAGACC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168118309 32 + 169853907 CCCTCGGCTGAGCACTGAGCTCGGTTCAGGCC i rheMac3.chr4 C 0 I 112 s macFas5.chr4 169073362 32 - 170955103 CCCTCGGCTGAGCACTGAGCTCGGTGCAGGCC i macFas5.chr4 I 3 I 182 s papAnu2.chr4 163891173 32 + 165299245 CCCTCGGCTGAGCACTGAGCTCGGTGCAGGCC i papAnu2.chr4 C 0 I 61 s chlSab2.chr13 96678488 32 + 98384682 TCCTTGGCTGAGCACTTGGCTTGGTGCAGGCC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169879560 31 + 171630274 -CCTTGGCTGAGCACTTACATTGGTGCAGGCC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56173082 6728 + 122678785 I a score=50858.000000 s hg38.chr6_KB021644v2_alt 100734 39 + 185823 CCTCGGCTGAGTACTTAGCTT--------------------------------------------------------------TGTGCAGGCCCATTGGGT s panTro4.chr6 170684659 101 + 172623881 CCTCGGCTGAGTACTTAGCTTGGTGCAGGCCCCTTGGCTGAGCACTGAGCTTGGTGCAGGCCCCTTGGGTGAGTACTTAACTTTGTGCAGGCCCATTGGGT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172433624 39 + 174210431 CCTCGGCTGAGCACTTAGCTT--------------------------------------------------------------GGTGCAGGCCCCTCGGCT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156298096 39 + 157873769 CCTCGGCTGAGCACTTAACTT--------------------------------------------------------------GGTGCAGGCCCATTGGGT i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169073576 39 - 170955103 CGTTGGGTGAGCACTGGGCTC--------------------------------------------------------------GGTGCACGGCCGTTGGGT i macFas5.chr4 I 182 T 221 s papAnu2.chr4 163891266 39 + 165299245 TGTTGGGTGAGCACTGGGCTC--------------------------------------------------------------GGTGCACGGCCGTTGGGT i papAnu2.chr4 I 61 C 0 s chlSab2.chr13 96678520 39 + 98384682 TGTTGGGTGAACACTGAGGTT--------------------------------------------------------------GGTGCAGGCCCGTTGGGT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169879591 38 + 171630274 -CTTGGCTGAGTACTTAGCTT--------------------------------------------------------------GGTGCAGGCCTGTTGACT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56173082 6728 + 122678785 I e rheMac3.chr4 168118341 112 + 169853907 I a score=7977.000000 s hg38.chr6_KB021644v2_alt 100773 8 + 185823 GAGCAC-------TG s panTro4.chr6 170684760 8 + 172623881 GAGCAC-------TG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172433663 8 + 174210431 GAGGAC-------TT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156298135 8 + 157873769 GAGCAC-------TG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169073394 15 - 170955103 AAGCACATTCACAAG i macFas5.chr4 T 221 C 0 s papAnu2.chr4 163891305 8 + 165299245 GAGCAC-------TG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96678559 8 + 98384682 GAACAC-------TG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169879629 8 + 171630274 GAGTAC-------GT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56173082 6728 + 122678785 I e rheMac3.chr4 168118341 112 + 169853907 I a score=79946.000000 s hg38.chr6_KB021644v2_alt 100781 91 + 185823 AGCTTAGTGCAGGCCCCTCGGCTGAGTACCTAGCTTGGTGCAGGCCCCTCAGCTGAGCAC-------TGAGCTTGGTGCAGGCCCATTGGGTGAGCAC s panTro4.chr6 170684768 91 + 172623881 AGCTTAGTGCAGGCCCCTCGGCTGAGTACTTAGCTTGGTGCAGGCCCCTCAGCTGAGCAC-------TGAGCTTGGTGAAGGCCTCTCGGCTGAGCAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172433671 91 + 174210431 AGCTTGCTGCAGGCCCCTCGGCTGAGGACTTAGCTTGCTGCAGGCCCCTCGGCTGAGGAC-------TGAGCTTGGTGCAGGCCCCTCGGCTGAGCAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156298143 91 + 157873769 AGCTTGGTGCAGGCCCCTCAGCTGAGCATTGAGCTTGGTGCAGGCCCCTCGGCTGAGCAC-------TGAGCTTGATGCAGGACCCTCGGCTGAGCAC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169073409 82 - 170955103 AGGCTGGTGCAGGCCAAGCACGTTCACAAGAGGCT-GGTGCAGGGCC-------AAGCACATTCACAAGAGGCTGGTGCAGGCC--------AAGCAC i macFas5.chr4 C 0 I 7 s papAnu2.chr4 163891313 91 + 165299245 GGCTCGGTGCACGGCCGTTGGGTGAGCACTGGGCTCGGTGCACGGCCGTTGGGTGAGCAC-------TGAGGTTGGTGCAGGCCCGTTGGGTGAGTAC i papAnu2.chr4 C 0 T 124 s calJac3.chr4 169879637 81 + 171630274 AGCTTAATGCAGGTCTGCTGACTGAGTACTTAGCTTAATGCAGGTCTCCTGACTGAGTAC-------TTAGCTTAATGCAGGTCTGCT---------- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56173082 6728 + 122678785 I e chlSab2.chr13 96678567 0 + 98384682 C e rheMac3.chr4 168118341 112 + 169853907 I a score=16790.000000 s hg38.chr6_KB021644v2_alt 100872 17 + 185823 TGAGCTTGGTGCA-GGCC s panTro4.chr6 170684859 17 + 172623881 TTAGCTTGGTGCA-GGCC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172433762 17 + 174210431 TGAGCTTGGTGCA-GGCC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156298234 17 + 157873769 TGAGCTTGATGCA-GGCC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169073498 17 - 170955103 AGAGGCTGGTGCA-GGCC i macFas5.chr4 I 7 I 31 s papAnu2.chr4 163891280 18 + 165299245 TGGGCTCGGTGCACGGCC i papAnu2.chr4 T 124 C 0 e calJac3.chr4 169879718 0 + 171630274 C e canFam3.chr1 56173082 6728 + 122678785 I e chlSab2.chr13 96678567 0 + 98384682 C e rheMac3.chr4 168118341 112 + 169853907 I a score=70617.000000 s hg38.chr6_KB021644v2_alt 100889 69 + 185823 C-TCGGCTGGGTACT--------------------------------------------------------------TAGCTTGGTGCAGGCCCGTTGGGTGAGCACTGAGCTGGGTGCAGACCCCTCGGCT s panTro4.chr6 170684876 70 + 172623881 CCTTGGCTGGGTACT--------------------------------------------------------------TAGATTGGTGCAGGCCCGTTGGGTGAGCACTGAGCTGGGTGCAGACCCCTCAGCT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172433779 70 + 174210431 CCTTGGATGAGCACT--------------------------------------------------------------GAGCTTGGTGCAGGCCCCTCGGATGAGCACTGAGCTGGGTGCAGGCCCCTCAGCT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156298251 132 + 157873769 CCTCGGCTGAGCACTGAGCTTGATGCAGGCCCCTCGGCTGAGCACTGAGCTTGATGCAGGCCCCTCGGCTGAGAACCTAGCTTGGTGCAGGCCCATTGCGTGAGCACTGAGCTTGGTGCAGGCCCCTCAGCT i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169073546 69 - 170955103 -CTCGGCTGAGCACT--------------------------------------------------------------GGGCTCGGTGCAGGCCCGTTGGGTGAGCACTGGGCTCGGTGCACGGCCGTTGGGT i macFas5.chr4 I 31 T 100 s papAnu2.chr4 163891298 69 + 165299245 -GTTGGGTGAGCACT--------------------------------------------------------------GGGCTCGGTGCACGGCCGTTGGGTGAGCACTGGGCTCGGTGCACGGCCGTTGGGT i papAnu2.chr4 C 0 T 162 s calJac3.chr4 169879718 66 + 171630274 ----GACTGAGTACT--------------------------------------------------------------TAGCTTGGTGCAGGCTGGTTGACTGAGTACTTAGCTTAATGCAGGTCTGCTGACT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56173082 6728 + 122678785 I e chlSab2.chr13 96678567 0 + 98384682 C e rheMac3.chr4 168118341 112 + 169853907 I a score=-8061.000000 s hg38.chr6_KB021644v2_alt 100958 15 + 185823 GAGCA---------------------------------------------------------------------------------------------CT-------GAGCTTGT s panTro4.chr6 170684946 15 + 172623881 GAGCA---------------------------------------------------------------------------------------------CT-------GAGCTTGT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172433849 108 + 174210431 GAACATTCAGCTTGGGGCAGGCCCCTCGGCTGAGCACTGAGCTTGGTGCAGGCCCCTCAGCTGAGTACTTAGCTTGGTGCAAGCCCATTGGGAGAGCACT-------GAGCTGGG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156298383 15 + 157873769 GAGCA---------------------------------------------------------------------------------------------CT-------GAGCTTAG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169073515 22 - 170955103 AAGCA---------------------------------------------------------------------------------------------CGTTCACAAGAGGCTGG i macFas5.chr4 T 100 C 0 s papAnu2.chr4 163891205 22 + 165299245 AAGCA---------------------------------------------------------------------------------------------CGTTCACAAGAGGCTGG i papAnu2.chr4 T 162 C 0 s calJac3.chr4 169879784 15 + 171630274 GAGTA---------------------------------------------------------------------------------------------CT-------TAGCTTGG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56173082 6728 + 122678785 I e chlSab2.chr13 96678567 0 + 98384682 C e rheMac3.chr4 168118341 112 + 169853907 I a score=33815.000000 s hg38.chr6_KB021644v2_alt 100973 17 + 185823 TGCAGGCCTCTCAGCTG s panTro4.chr6 170684961 17 + 172623881 TGCAGGCCTCTCAGCTG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172433957 17 + 174210431 TGCAGGCCCCTCAGCTG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156298398 17 + 157873769 TGCAGGCCCCTTGGCTG i nomLeu3.chr3 C 0 I 364 s rheMac3.chr4 168118453 17 + 169853907 TGCAGGGCCCTCGGCTG i rheMac3.chr4 I 112 C 0 s macFas5.chr4 169073537 17 - 170955103 TGCAGGGCCCTCGGCTG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163891227 17 + 165299245 TGCAGGGCCCTCGGCTG i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169879799 17 + 171630274 TGCAGGTCTGCTGACTG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56173082 6728 + 122678785 I e chlSab2.chr13 96678567 0 + 98384682 C a score=162405.000000 s hg38.chr6_KB021644v2_alt 100990 100 + 185823 AGCACTTAGCTTGGTGCAGGCCCCTTGGCTGAGTACTTAGCTTGGGGCAGGCCCATTGGGTGAGCAATGAGCTTGGTGCAGGGCTCTCAGCTGAGCACTT s panTro4.chr6 170684978 100 + 172623881 AGCACTTAGCTTGGTGCAGGCCCCTTGGCTGAGTACTTAGCTTGGGGCAGGCCCATTGGGTGAGCAATGAGCTTGGTGCAGGGCTCTTGGCTGAGCACTT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172433974 100 + 174210431 AGCACTTAGCTTGGTGCAGACCCCTTGGCTGAGTACTTAGCTTGGGGCATGCCCATTGGGTGAGCAATGAGCTTGGTGCAGGGCCCTTGGCTGAGCACTT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156298779 100 + 157873769 AGCACTTAGCTTGGTGCAGGCCCTTCAGCTGAGCACTGAGCTTGGTGCAGGCCCCTCGGCTGAGCAATGAGCTTGGTGCAGGGCCCTTGGCTGGGCACTT i nomLeu3.chr3 I 364 C 0 s rheMac3.chr4 168118470 100 + 169853907 AGCACTGGGCTCGGTGCAGGCCCGTTGGGTGAGCACTGGGCTCGGTGCACGGCCGTTGGGTGAACACTGGGCTCGGTGCAGGCCCATTGGGTGAGCACTG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169073554 100 - 170955103 AGCACTGGGCTCGGTGCAGGCCCGTTGGGTGAGCACTGGGCTCGGTGCACGGCCGTTGGGTGAACACTGGGCTCGGTGCAGGCCCATTGGGTGAGCACTG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163891244 100 + 165299245 AGCACTGGGCTCGGTGCAGGCCTGTTGGGTGAGCACTGGGCTCGGTGCACGGCCGTTGGGTGAGCACTGGGCTCGGTGCACGGCCGTTGGGTGAGCACTG i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169879816 67 + 171630274 AGTACTTAGCTTGGTGCAGGCTGGTTGACTGAGTACTTAGAT--------------------------------GGTGCAGG-CCCTTGACTAAGGACTT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56173082 6728 + 122678785 I e chlSab2.chr13 96678567 0 + 98384682 C a score=974045.000000 s hg38.chr6_KB021644v2_alt 101090 351 + 185823 AGCTTGGTGCAGGCCCCTTGGCTGAACACTGAGCCTGGTGCAGACCCCTTGGCtgagtacctaccgactgtcagaggcacacgagtgctctcatgcagcttctcacttaatcttcacaacctctcacagccaggggtgacatcaatgccattttcagatgggaaactgagcctcagggaactcaatgagccacccagggttccactgtaaagggagaaagggaaatgaaggttcccctgtgtcctggGAGGCATCCTCTATCA-TGTGAGTACCTGGAGGCCAGCGTTCGAGGCTGCTCAGGATCACGAGAATCATCAGCACCTCTCAGTTTTCCAGCCCCTGTTTCAGCAC s panTro4.chr6 170685078 351 + 172623881 AGCTTGGTGCAGGCCCATTGGCTGAACACTGAGCCTGGTGCAGACCCCTTGGCtgagtacctaccgactgtcagaggcacacgagtgctctcatgcagcttctcacttaatcttcacaacctctcacagccaggggtgacatcaataccattttcagatgggaaactgagcctcaggaaactcaatgagccacccagggttccacTGTAAAGGGAGAAAGGGAAATGAAGGTTCCCCTGTGTCCTGGGAGGCATCCTCTATCA-TGTGAGTACCTGGAGGCCAGCGTTCGAGGCTGCTCAGGATCATGAGAATCATCAACACCTATCAGTTTTCCAGCCCTTGTTTCAGCAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172434074 352 + 174210431 AGCTTGGTGCAGGCCCGTTGGCTGAACAGTCAGCCTGGTGCAGGCCCCTTGGCtgagtacctagcgactgtcagaggcacacaagtgctctcatgcagcttctcacttaatcttcacaacttctcacagccaggggtgacatcaatgccattttcagatggggagctgagcctcagggaactcaatgagccacccagagtcccactgtaaagggagaaagggaaatgaaggttctcctgtgtcccgggaggcatcctctatcactGTGAGTACCTGGAGGCCAGCGTTCGAGGCTGCTCAGGATCACAAGAATCATCAACACCTCTCAGTTTTCCAGCCCTTGTTTCAGCAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156298879 351 + 157873769 AGCTTGGTGCAGGCCC-TTGGCTGAACACTGAGCCTGGTGCAGGCCCCGTGGCTGAGTACCTAGCGACTGTCAGAGGCACACGagtgctctcacgcagcttctcacttaatcttcacaacctctcacagccaggggtgacatcagtgccattttcagatgggaagctgagcctcagggaactcagtgagccacccagggtcccacTGTAAAGGAAGAAAGGGAAATGAAGGTTCCCCTGTGTCCTGGGAAGCATCCTCTATCACTGCGAGTACCTGGGGGCCAGCGTTTGAGGCCGCTCAGGATCACGAGAATCATCAACACCTCTCAGTTTTCCAGCCCTTGTTTCAGCAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168118570 350 + 169853907 AGGTTGGTGCAGGCCCGTTGGGTGAGCACTGTGGTTGGTGCAAGCCCATTGGGTGAGTACCTGGCAACTACCAGGGGCACACGagtgttctcatgcagcttctcacttaa-cttcacaacctctcacagccaggggtgacatcaatgccattttcagatgggaagctgagcctcagggaactcaatgagccacccagggtcccacTGTACAGGGAGAAAGGGAAATGAAGGTTCACCTGTGTCCTGGGAGGCGTCCTCTATCACTGTGAATACCTGGAGGCCAGCGTTCGAGGCTGCTCAGGATAACGAGAATCATCAACACCTCTCAGTTTTCCAGCCCTTGTTTCT-CAC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169073654 350 - 170955103 AGGTTGGTGCAGGCCCGTTGGGTGAGCACTGTGGTTGGTGCAAGCCCATTGGGTGAGTACCTGGCAACTGCCAGGGGCACACGagtgttctcatgcagcttctcacttaa-cttcacaacctctcacagccaggggtgacatcaatgccattttcagatgggaagctgagcctcagggaactcaatgagccacccagggtcccactgtacagggagaaagggaaatgaaggttcacctgtgtcctgggaggcgtcctctatcACTGTGAGTACCTGGGGGCCAGCGTTCGAGGCTGCTCAGGATAACGAGAATCATCAACACCTCTCAGTTTTCCAGCCCTTGTTTCT-CAC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163891344 350 + 165299245 GGCTCGGTGCACGGCCGTTGGGTGAGCACTGAGGTTGGTGCAGGCCCGTTGGGTGAGTACCTGGCAACTACCAGGGGCACACGAGTGTTCTCATGCAGCTTCTCACTTAA-CTTCACAACCTCTCACAGCCAGGGATGACATCAATGCCATTTTCAGATGGGAAGCTGAGCCTCAGGGAACTCAATGAGCCACCCGGGGTCCCACTGTAcagggagaaagggaaatgaaGGTTCACCTGTGTCCTGGGAGGCGTCCTCTCTCACTGTGAGTACCTGGAGGCCAGCGTTCGAGGCTGCTCAGGATAACGAGAATCATCAACACCTCTCAGTTTTCCAGCCCTTGTTTCT-CAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96678567 351 + 98384682 AGGTTGGTGCAGGCCCGTTGGGTGAACACTGAGGTTGGTGCATGCCCCTTGACTGAGTACCTGGCAACTGCCAGGGGCACACGagtgctctcatgcagcttctcacttaatcttcaaaacctctcacagccaggagtgacatcaatgctattttcagatgggaagctgagcctcagggaactcaatgagccacccagggtcccactgtacagggagaaagggaaatgaaggttcacctgtgtcctgggaggcgtcctctatcACTGTGAGTACCTGGGGGCCAGCGTTCGAGGCTGCTCAGGATAACGAGAATCATCAACACCTCTCAGTTTTCCAGCCCTTGTTTCA-CAC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169879883 340 + 171630274 AGCTTGGTTCAGACCCACTGGCTGA-CACTTAGCTTGACGCAGACCTGTTGGCTGGGTACCTAGCGACTGTCAGGGG-ACAtgagtgctctcatgcaacttctcacttaatcctcacagcctctcacaggcaggggtggcatcagtgccattttcagatggaaagctgaaccccagggaactcagtgacccatccagagtcccaTCGTAAAGGG-GAAGGGGAAATGAAGGCTCGTCTGTGTCCT-GCAGGCGTCC-CCATGACTCTGAGGAGCTGGAGGCCAACGTCC-AAACTGCTCAGG---ACGAGAATCATCAACGCCTCCCAGTTACCCA---CTCATTTCAGCAC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56173082 6728 + 122678785 I a score=263165.000000 s hg38.chr6_KB021644v2_alt 101441 118 + 185823 CTGATCTCTCCCCAAACATCAGGCTGGTTATATTCAAAGATACACGATAAGCTGCATTTTCCG----TTCCAGATGCCAGGGCTCCCCAGGGGCTCTGTCTGTCCCCTTTCAAGTCCCATCA s panTro4.chr6 170685429 122 + 172623881 CTGATCTGTCCCCAAACATCAGGCTGGTTATATTCAAAAATACATGATGAGCTGCATTTTCCAGCCATTCCAGATGCCAGGGCTCCCCAGGGGTTCTGTCTGTCCCCTTTCAAGTCCCATCA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172434426 122 + 174210431 CTGATCTGTCCCCAAACATCAGGCCGGTTATATTCAAAAATATATGATGAGCTGCATTTTCCAGCCATTCCAGATGCCAGGGCTCCCCAGGGGTTCTGTCTGTCCCCTTTCAAGTCCCATCA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156299230 121 + 157873769 CTGCTCTGTCCCCAAACATCAGGCTGGTTATACTAAAAAATACATGATGAGCTGCATTTTCCAGCCATTCCAGATGCCAGGGCTCCCCAGGGGTTCTGTCTGTCCCCTTTTAAGTCCCATC- i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168118920 113 + 169853907 CTAATCTGCCCCCAAACATCAGGTTGGTTATATTCAAAAATACATGATGAGCTCCATT---------TTCCAGATGCCAGGACTCCCCAGGGGTTCTGTCTGTCCCCTTTCAAGTCCCATCA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169074004 113 - 170955103 CTAATCTGCCCCCAAACATCAGGTTGGTTATATTCAAAAATACATGATGAGCTCCATT---------TTCCAGATGCCAGGACTCCCCAGGGGTTCTGTCTGTCCCCTTTCAAGTCCCATCA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163891694 113 + 165299245 CTAATCTGCCCCCAAACATCAGGCTGGTTATATTCAAAAATACATGATGAGCTCCATT---------TTCCAGATGCCAGGACTCCCCACGGGTTCTGTCTGTCCCCTTTCAAGTCCCATCA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96678918 113 + 98384682 CTAATCTGCCCCCAAACATCAGGCTGGTTATATTCAAAAATACATGATGAGCTCCATT---------TTCCAGATGCCAGGGCTCGCCAGGGGTTCTGTCTGTTCCCTTTCAAGTCCCATCA i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169880223 0 + 171630274 C e canFam3.chr1 56173082 6728 + 122678785 I a score=2900435.000000 s hg38.chr6_KB021644v2_alt 101559 1112 + 185823 GGGGCCTGCCCTCAGACACCACAGGACCTGACAAGGTATCCACGGCCTCATGATCCTTCACCCCTGCCCCCGGCTGGGGAAAGGCTCAAGGCTGCACGGCTCTGGGGTTCCTAGGACAAGCTCTGGGTGGGGCAGTCTGCCAGCTCAGAGACAGCAGGAGCAGGAGAGGTGAGGACTGGATATCAGGTGTAGAAAAGAAACCGGCTCATCAGCTTTCATCCTCCATTAGCTCCAGCACGATGGGGGTGGACAGGTGGTCTCGGCTGCAGGGGTAGCATGGGGACGGAGGCGGCCGGCCCGAAGGACCATGGGTCAGAAGCTGAGTGGCAGGCCCTGCAGTGGCCACTGTGAGTGTGGGGTGTGGCTATGCTGTGACCACACGACCAGGCTGAGGGCTGCTTGGAGCCTGCATCCCAGGCTCACGCTGGCCAGGCTCATCACTATCTGTACTCAGAGCTGGGTTGACCGTCCTTCCGGGCCTCCGTGTGTGC-CCTGGACTGACCTCCAGCCTGGGGTGTGGACAGCAGCATGCTCCCTCCAGCAGGCTGCCTTGCCCTCCTCTGCAGGCCTTTGGCTGCTGCGGCCCCAGCTCTGGGCCATGAGCCGGGCTGGGTCCTTTGGCAGGCCTCCGCTCGTTCATCCCCCAAGAGATCCACGATGCCAAGAAGGTGGCCGGACAGAGGTGAAAAGCCAGCTCTGGAGGTTTAGATGCTATGTTCCCGACTTCCTCACCATGCTTCTTCCTGACGTCCTTAACTCCTGCCTCTGAGCAAAGTTCCTGTGCATGTTTCAGAAATTAAGAATGATGAACAAGGGAACACTGAGAGGGAGGGAACTTTTGTGAATTGATGATGATATTTAGGAGCCGTTGCTGGAAAGCTGTAACTGCCTGAACTAGCGGTGGGTCAAAACTTGGTCCAGTTATCTCAAATACCCACTTGTATGTTTCTGGGTAGTCTTTTCAAGAATTAAAGGAAAGT-GAAAAAAAAGAAAAAAAAGCATCGTTTCTCAGCCTTTCTCATTTACGCTTAGAG--TCTCCTCACATCACAGACATGCCGGGCAGAGCACTTGGCAAATGTGCAGCCTTA--AAACAAGCAAACGAAATCCATTGC s panTro4.chr6 170685551 1113 + 172623881 GGGGCCTGCCCTCAGACACCACAGGACCTGACAAGGTATCCACGGCCTCACGATCCTTCACCCCTGCCCCCGGCTGGGGAAAGGCTCAAGGCTGCACCGCTCTGGGGTTCCTAGGACAAGCTCTGGGTGGGGGAGTCTGCCAGCTCAGAGACAGCAGGAGCAGGAGAGGTGAGGACTGGATATCGGGTGTAGAAAAGAAACCGGCTCATCAGCTTTCATCCTGCATTAGCTCCAGCACGATGGGGGTGGACAGGTGGTCTCGGCTGCAGGGGTAGCATGGGGATGGAGGCGGCCGGCCCGAAGGACCATGGGTCAGAAGCTGAGTGGCAGGCCCTGCAGTGGCCGCTGTGAGTGTAGGGGGTGGCTATGCTGTGACCACACGACCAGGCTGAGGGCTGCTTGGAGCCTGCATCCCAGGCTCACGGTGGCCAGGCTCATCACTATCTGTACTCAGAGCTGGGTTGACCGTCCTTCCGGGCCTCTGTGTGTGC-CCTGGACTGACCTCCAGCCTGGGGTGTGGACGGCAGCATGCTCCCTCCAGCAGGCTGCCTTGCCCTCCTCCGCAGGCCTTTGGCTGCCGCGGCCCCAGCTCTGGGCCATGAGCCGGGCTGTGTCCTTTTGCAGGCCTCCGCTCATTTATCCCCTAAGAGATTCACGATGCCAAGAAGGTGGCTGGACAGAGGTGAAAAGCCAGCTCTGGAGGTTTAGATGCTATGTTCCCGACTTCCGCACCGTGCTTCTTGCCGACGTCCTTAACTCCTGCCTCTGAGCAAACTTCCTGTGCATTTTTCAGAAATTAAGAATGATGAGTAAGGGAACACTTGGAGGGAGGGAACTTTAGTGAATTGATGATGATATTTAGGAGCCGTTGCTGGAAAGCTGTAACTGCCTGAACTAGCGGTGGGTCAAAACTTGGTCCAGTTATCTCAAATACCCACCTGTATGTTTCTGGGCAGTCTTTTCAAGAATTAAAGGAAAGTGGGAAAAAAAAAAAAAAAAGCATCGTTTCTCAGCCTTTCTCATTTACGCTTAGAG--TCTCCTCACACCACAGACATGCCGGGCAGAGCACTTGGCAAATGTGCAGCCTTA--AAACAAGCAAACGAAATCCATTGC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172434548 1099 + 174210431 GGGGCCTGCCCTCAGACACCACAGGGCCTGACAAGGTATCCACGGCCTCACGAACCTTCACCCC-GCCCCCGGCTGGGGTAAGGCTCAACGCTGCGCGGCTCTGGGGGTCCTAGGACAAGCTCTGGGTGGGGGAGTCTGCCAGCTCAGAGACAACAGGAGCAGGAGAGGTGGGGACTGGATATCGGGTGTAGAAAAGAAAACGGCTCATCAGCTTTCACCCTCCGTTAGCTCCAGCACGATGGCGGTGGACAGGTGGTCTCAGCTGCAGGGGTAGCATGGGGA----------CGGCCCGAAGGACCATGGGTCAGAAGCTGAGTGGCAGGCCCTGCAGTGGCCACTGTGAGTGTCGGGGGTGGCCATGCTGTGACCACACAACCAGGCTGAGGGCTGCTTGGAGCCTGCGTCCTAGGCTCACGGTGGCCAGGCTTGTCACTGCCTGTACTCAGAGCTGGGTTGACCGTCCTTCCGGGCCTCTGTGTGTGC-CCTGGACTGACCTCCAGCCTGGGGTGTGGACAGCAGCGTGCTCCCTCCAGCAGGCTGCCTTGCCCTCCTCTGCAGGCCTTTGGCTGCTAAGGCCCCAGCTCTGGGCCATGAGCCGGGCCGAGTCCTTTTGCAGGCCTCAGCTCATTCATCCCCTAAGAGATCCACAATGCCAAGAAGGTGGCTGGACAGAGGTGAAAAGCCAGCTTTGGAGATTTAGATGCTGTGTTCCCGACTTCCTCACCGTGCTTCTTCCTGACGTCCTTAACTCCTGACTCTGAGCAAACTTCCTGTGCATTTTTCAGAAATTAAGAATGATGAATAAGGGGACGCTTAAAGGGAGGGAACTTTTGTGAATTGGTGATGATATGTAGGAGCCGTTGCTGGAAAGCTGTAAGTGCCTGAACTAGCAGTGGGTCAAAACTTGGTCCAGTTATCTCAAATACTCATTTGTATGTTTCTGGGCAGTCTTTTCAAGAATTAAAGGAAAGT-GGAAAA----AAAAAAAAGTATCGTTTCTCAGCCTTTCTCATTTATACTTAGAGACTCTCCTCACACCACAGACATGCCAGGAAGAGCACTTGGCAAATGTGCAGCCTTA--AAACAAGCAAACGAAATCCATTGC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156299351 1104 + 157873769 GGGGCCTGCCCTCAGACACCACAGGACCTGACAAGGTATTCATGGCCTCATGACCCTTCACCCCCACCCCCGGCTGGGGAAAGGCTCAATGCTGCACGGCTCTGGGGTTCCTAGGACAAGCGCTGGGTGGGGGAGTCTGCCAGCTCAGAGACAGCAGGAGCAGGAGAGGTGGGGACTGGATATCGGGTTTAGAAAAGAAACTGGCTCATCAGCTTTCATCCTCCGTTAGCTCCAGCACGATGGGGGTGGACAGGTGGTCTCGGCTTCAGGGGTAGCGTGGGGACGGAGGTGGCCGGCCCGAAGGACCATGGGTCAGAAGCTAAGTGGCAGGCCCCGCAGTGGCCGC--TGAGTGTGGGGGGTGGCCATGCTGTGACCACACGACCAGGCTGAGGGCTGCTTGGAGCCTGCATCACAGGCTCACGGTGGCCAGGCCCATCACTGTCTGTACTCAGAGCTGGGTTGACCGTCCTTCCGGGCCTCTGTGTGTGC-CCTGGACTGACCTCCAGCCTGGGATGTGGACGGCAGCGTGCTCCCTCCAACAGGCTGCCTTGCCCTCCTCTGCAGGCCTTTGGCTGCTGCGGCCCCAGCTCTGGGCCGTGAGCTGGGCCGAGTCCTTTTGCAGGCCTCAGCTCATTCATCCCCTAAGAGATCCACGATGCCAAGAAGGTGGCCGGACAGAGGTGAAAAGCCAGCTCTGGAGGTTTAGATGCTGTGTTCCTGACTTCCTCACCGTG-TTTTTCCTGATGT-CTTACTTCCTGCCTCTGAGCAAACTTCCTGTGCATTTTTCAGAAATTAAGA---ATGAATAAGTGGACGCTTGGAGGGAGCGAACTTTTGTGAATTGATGATGATACGTAGGAGGCGTCGCTGGAAAGCTGTAACTGCCTGAACTAGCAGTGGGTCAAAACTTGGTCCAGCTATCTCAAATACTCATTTGTACGTTTCTGGGCAGTCTTTTCAAGAATTAGAGGAAAGT-GAGAAAA---AAAAAAAAGTATCATTTCTCAGCCTTTCTCATTTACACTTAGAGACTCTCCTCACACCACAGACATGCTGGGCAGAGAACTTGGCAAATGGGCAGCCTTA--AAACAAGCAAATGAAATCCATTGC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168119033 1057 + 169853907 GAGGCCTGCCCTCAGACACCACATGACCTGACAAGGTATCTATGGCCTCACAACCTTTCACCCCTTCCCCCGGCTGAGGAAAGGCTCAAAACGGTACGGCTCTGGGCATCCTAGGACAAGCTCTGGGTGGGGA--------AGTTCAGAGACAGCAGGAGCGGGAGAGGTGGGGACTGGATAGCGGGTGTAGAAAAGAAACCGGCTCATCAGCTTTCATCCTCCGTTAGCTCCAGCACAATGGGGGTGGACAGGTGGTCTCAGCTGCAGGGGTAGCACGGGGACGGAGGCAACTGGCCCAAAGGACCATGAGTCAGAAGCTGAGTGGCAGGCCTTGCAGTGGTGGCTGTGCATGTGGGGGTTGGCCGCGCTGTGACCACACGACCAGGCTGAGGGCTGCTTGGAGCCTGCGTCACAGGCTCATGGTGGCCAGGCTCCTCACTGCCTGTACTCAGAGCTGGGTTCACCATCCTTCCGGACCTCTGTGTGTGC-CCTGGACTTACCGCCAGCCTGGGCTGTGGACGGCAGTGTGCTCCCTCCGGCAGACTGCCTTGCCCTCCTCTGCAGGCCTGTGGCTGCTGCGGCCCCAGCTCTGAGCCGTGAGCCGGGCTGAGTCCTTTTGCAGGCATCAGC-CCCCCATCCCCTAAGAGACCCATGATGCCAGGAAGGTGGCCGGACAGAGGTGAAAA-CCAGCCCTGGAGGTTTAGATGCTGTGTTCCCGCCTTCCTCACTGTGCTTCTTCCTGACGTCCTTAACTCCTGCCCCTGAGCAAACTTCCTGTGTGTTTTTCAGAAATTAAGAAAGACGGACAAGTGAACGCTTAGAGGGAAGGAACTTTTGTGAATTGGTGATGATACGTAGGAGCCATTGCTGGAAAGCTGTAACCGCCTGAAGTAGCAGTGGGTCAAAACTTGGTCCGGTTATCTCAAATACCCATTTGTATGTTTCTGGGCAGTC------------------------------------------------TTCTCAGACTTTCTCATTTACGCTTAAAGACTCTCCCCACACCACAGATGTGCCATGCAGAGCACTTGGCAAATGCGCAGCCTTA--AAATAAGCAAACGAAATCCATTGC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169074117 1056 - 170955103 GAGGCCTGCCCTCAGACACCACATGACCTGACAAGGTATCTACGGCCTCACAACTTTTCACCTCTTCCCCCGGCTGAGGAAAGGCTCAAAACGGTACGGCTCTGGGCCTCCTAGGACAAGCTCTGGGT-GGGA--------AGCTCAGAGACAGCAGGAGCGGGAGAGGTGGGGACTGGATAGCGGGTGTAGAAAAGAAACCGGCTCATCAGCTTTCATCCTCCGTTAGCTCCAGCACAATGGGGGTGGACAGGTGGTCTCAGCTGCAGGGGTAGCACGGGGACGGAGGCAACTGGCCCAAAGGACCATGAGTCAGAAGCTGAGTGGCAGGCCTTGCAGTGGTGGCTGTGCATGTGGGGGTTGGCCGCGCTGTGACCACACGACCAGGCTGAGGGCTGCTTGGAGCCTGCGTCACAGGCTCATGGTGGCCAGGCTCCTCACTGCCTGTACTCAGAGCTGGGTTCACCATCCTTCCGGGCCTCTGTGTGTGC-CCTGGACTTACCGCCAGCCTGGGCTGTGGACGGCAGCGTGCTCCCTCCGGCAGACTGCCTTGCCCTCCTCTGCAGGCCTGTGGCTGCTGCGGCCCTAGCTCTGAGCCGTGAGCCGGGCTGAGTCCTTTTGCAGGCATCAGC-CCCCCATCCCCTAAGAGACCCATGATGCCAGGAAGGTGGCCGGACAGAGGTGAAAA-CCAGCCCTGGAGGTTTAGATGCTGTGTTCCCGCCTTCCTCACTGTGCTTCTTCCTGACGTCCTTAACTCCTGCCCCTGAGCAAACTTCCTGCGTGTTTTTCAGAAATTAAGAAAGATGGACAAGTGAACGCTTAGAGGGAAGGAACTTTTGTGAATTGGTGATGATACGTAGGAGCCATTGCTGGAAAGCTGTAACCGCCTGAAGTAGCAGTGGGTCAAAACTTGGTCCGGTTATCTCAAATACCCATTTGTATGTTTCTGGGCAGTC------------------------------------------------TTCTCAGACTTTCTCATTTACGCTTAAAGACTCTCCCCACACCACAGATGTGCCATGCAGAGCACTTGGCAAATGCGCAGCCTTA--AAACAAGCAAACGAAATCCATTGC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163891807 1057 + 165299245 GAGGCCTGCCCTCAGACACCACATGACCTGACAAGGTATCTATGGCCTCACAACCTTTCACCTCTTCCCCCGGCTGAGGAAAGGCTCAAAACGGTACGGCTCTGGGCATCCTAGGACAAGCTCTGGGTGGGGA--------AGCTCAGAGACAGCAGGAGTGGGAGAGGTGGGGACTGGATACCGGGTGTAGAAAAGAAACCGGCTCATCAGTTTTCATCCTCCGTTAGCTCCAGCACAATGGGGGTGGACAGGTGGTCTCAGCTGCAGGGGTAGCACGGGGACAGAGGCAACTGGCCCAAAGGACCATGAGTCAGAAGCTGAGTGGCAGGCCCTGCAGTGGCCGCTGTGAGTGTGGGGGTTGGCCGTGCTGTGACCACACGACCAGGCTGAGGGCTGCTTGGAGCCTGCGTCACAGGCTCATGGTGGCCAGGCTCCTCACTGTCTGTACTCAGAGCTGGGTTGACCATCCTTCCGGGCCTCTGTGTGTGC-CCTGGACTTACCGCCAGCCTGGGCTGTGGACGGCAGTGTGCTCCCTCCGGCAGACTGCCTTGCCCTCCTCTGCAGGCCTGTGGCTGCTGCGGCCCCAGCTCTGAGCCGTGAGCCAGGCTGAGTCCTTTTGCAGGCATCAGC-CCCCCATCCCCTAAGAGACCCATGATGCCAGGAAGGTGGCCGGACAGAGGTGAAAA-CCAGCCCTGGAGGTTTAGATGCTGTGTTCCCGCCTTCCTCACTGTGCTTCTTCCTGACGTCCTTAACTCCTGCCCCTGAACAAACTTCCTGtgtatttttcagaaattaagaaagatGGACAAGTGAACGCTTAGAGGGAAGGAACTTTTGTGAATTGGTGATGATACGTAGGAGCCATTGCTGGAAAGCTGTAACCGCCTGAACTAGCAGTGGGTCAAAACTTGGTCCGGTTATCTCAAATATGCATTTGTATGTTTCTGGGCAATC------------------------------------------------TTCTCAGACTTTCTCATTTACGCTTAAAGACTCTGCTCACACCACAGACGTGCCGTGCAGAGCACTTGGCAAATGTGCAGCCTTA--AAACAAGCAAACGAAATCCATTGC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96679031 1058 + 98384682 GAGGCCTGCCCTCAGACACCACATGACCTGACAAGGTATCCACGGCCTCACAACCCTTCACCTCTGCCCCCGGCTGAGGAAAGGCTCAAAGCGGCATGGCTCCGGGCGTCCTAGGACAAGCTCTGGGTGGGAA--------AGCTCAGAGACAGCAGGAGCGGGACAGGTGAGGACTGGATACCGGGTGTAGAAAAGAAACCGGCTCATCAGCTTGCATCCTCCGTTAGTTCCAGCACAATGGGGGTGGACAGGTGGTCTCGGCTGCAGGGGTAGCACGGGGAAGGAGGCAGCTGGCCCAAAGGACCGTGGGTCAGAAGCTGAGTGGCAGGCCCTGCAGTGGCCGCTGTGAGTGTGGGGGTTGGCCGTGCTGTGACCACTCGACCAGGCTGAGGGCTGCTTGGAGCCTGCGTCACAGGCTCGTGGTGACCAGGCTCCTCACTGTCTGTACTCAGAGCTGGGTTGACCATCCTTCCGGGTCTCTGTGTGTGC-CCTGGACTTACCGCCAGCCTGGGCTGTGGACGGCAGCGTGCTCCCTCCAGCAGGCCACCTTGCCCTCCTCTGCAGGCCTGTGGCTGTTGCGGCCCCGGCTCTGAGCCGTGAGCCGGGCTGAGTCCTTTTGCAGGCATCAGCTCCCCCATCCCCTAAAAGACCCACGATGCCAGGAAGGTGGCCGGACAGAGGTGAAAA-CCAGTCCTGGAGGTTTAGATGCTGTGTTCCCGCCTTCCTCACTGTGCTTCTTCCTGACGTCCTTAACTCCTGCCTCTGAGCAAACTTCCTGTGCATTTTTCAGAAATTAAGAATGATGGATAAGTGAACGCTTAGAGGGAAGGAACTTTTGTGAATTGGTGATGATACAGAGGAGCCATTGCTGGAAAGCTGTAACTGCCTGAACTAGCAGTGGGTCAAAACTTGGTCCGCTCATCTCAAATACCCATTTGTATGTTTCTCGGCAGTC------------------------------------------------TTCTCAGACTTTCTCATTTACGCTTAAAGACTCTGCACACACCACAGACGTGCCGTGCAGAGCACTTGGCAAATGCGAAGCCTTA--AAACAAGCAAACAAAATCCATTGC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169880223 1068 + 171630274 GGGGCCTGTCCTCAGACACTACAC-ACCTGACAAGGTTTCCACAGCCTCACGACCCTTCACCCCCACCCTCAGCTGGGGAAAGGCTGGAGGCTGCGCAGCTCTGGGGGTCCTGGGATAAGCTCTGGGTGGGGGAGTCTGGCAGTGCAGAGACACCAGGAGCGAGAGAGGTGGGGACTGGATACCAGGTGTAGAAAATAAACTGGCTCGTCAGCTTTCATCCCCCATTAGCTCCAGCAAAATGGGGGTGGACAGGTGGTCTCAGGCACA-GGGTGGCATGGGGATGGAGGCGTCT-GCCCGCAGGACCAGGGGTCAGAAGCTGAGTGGCAGGCCCTTCTGAGGCTGCTATGTGT---GGGGTTGGCCGAGCTGTGACCACATGGCTGGGCTGAGGGATGCTTGGAGCCTGCATCACAGGCTCACAGAGGCCAGGCTTGGCACCGTCGGCACTCAGAGCTGGGCTGACCATCCTTCCGGGCCCC---ATGTGCACCTGGACTGACCTCCAGCCTGAG-TGTGGATGGCAGCGTGCTCCCTCCGGCAGGCTGAGTCGCCCTCCTTGGCA-GCACGTGGCTGCTGCAACCCTGGCTTTGGGCCGTGAGCCAGGCAGCAT-CTTTCACAGACATCAGCCCACTCATCCCCTAAGAGACCCACAATGCCAAGAAGGTGGC-GGACGGAAGTGAGAC----GCTCTGTAGGTTCACAGGCTGTGCTCCCAACTTCCCCACCACGCTTGCTCCTGACATCCT------CTGCCTCCGAGCAGACTTCATGTGTGT-TTTCAGAATTTAAGAATGATGAGTAAGTGAACACTTAGAGGAAGGGAACTTTTGTGAAATGATTATGATAAATA------------GGCAGGCTGCACCTGCCTGAACTAGTAGTGGGTCCTAATGTGGTCTCATTACCTCAAATACCAACTTCGACGTTTCTGGGCAGTTTTTTCAATAATTAAAGGAAAGT-----------GAAAAAAAGTATAATTTCTCAGCCTTTCTCATTTATGCTTAGAGACTCTCCTCACAACGCA---ACGCTGTGCAGAGCACCTGGCAAACGTGCAGCCTTAAGAAGCAAGCAAGCAAAACCCACTGC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56173082 6728 + 122678785 I a score=662787.000000 s hg38.chr6_KB021644v2_alt 102671 334 + 185823 CATAGGCCAC-----------tttttttttttttt-----------------tttttttttgagacggagtctcattcttgtcct-caggctggagtgcaatagtgcgatctctctcggctcaccgcaacctctgcctcccgggttcaagtgattctcctgcctccgcctcccgagtagctgggatta-aggcacccaccaccatgccctgctaatttttgtattttttagtagaaacggggtttcaccatgttggccaggctggtttcgaactcccggcctcacgtgatccacccacctcagcctcccaaagtgctgggatgacaggcgtgagccaccacgccaggccCATATCCTGCTTTTT s panTro4.chr6 170686664 345 + 172623881 CATAGGCCGCttttttttttttttttttttttttt-----------------tttttttttttgacggagtctcattcttgtcct-caggctggagtgcaatagtgcgatctctctcggctcaccgcaacctctgcctcccgggttcaagtgattctcctgcctccgcctcccgagtagctgggatta-aggcacccaccaccatgccctgctaatttttgtattttttagtagaaacggggtttcaccatgttggccaggctggtttcgaactcccggcctcacgtgatccacccacctcagcctcccaaagtgctgggatgacagccgtgagccaccacgccaggccCATATCCTGCTTTTT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172435647 334 + 174210431 CATAGGCCGC-----------tttttttttttttt-----------------tttttttttgagacgaagtctcattcttgtcct-cagactggagtgcaatagtgcaatctctctcggctcactgcaacctctgcctcccgagttcaagtgattctactgcctccacctcctgagtagctgggatta-aggcacccaccacgatgcccagctaatttttgtatttcttagtagaaacggggtttcaccatgttggccaggctggtttcgaactgctggcctcacgtgatctgcctgcctcagcctcccaaagtgctgggattacaggcatgagccaccacgccaggccCATATCCCGCTTTTT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156300455 332 + 157873769 CATGGGCTGC--------ttttttatttatttatt-----------------tatttatttgagacgaagtctcattc-tgtcct-caggctggagtgcaatagcgcaatctct----ggtcaccgcaacctctgcctccagggttcaagtgattctcctgcctccgcctcctgagtagctgtgatta-aggcacccaccaccatgcccggataatttttgtattttttagtagaaacggggtttcaccatgttggccaggctggttttgaactcctggcctcacgtgatccgcctgcctcagtctcccaaagtgctgggattacaagcatgagccaccacgccaggtcCATATCCTGCTTTTT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168120090 321 + 169853907 CATAGGCCGC---------------------tttt-----------------tttttttttgagatgaagtctcattcttgtcctccaggctggagagaaatagcgtgatctcg----gctcactgtaacctctgcctcccgggttcaagtgattctcctgccactgcctcccaagtagctgggattacaggtgcccaccaccacgcccagctaatttttgtattgtttagtagagacggggtttcaccacgttggccaggctggtttcaaactcctagcctcatgtgatccccccgcctcagcctcccaaagtgct-agattataggcatgaaccaccgcacccagccCATATCCTGCTTTTT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169075173 324 - 170955103 CATAGGCCGC------------------ttttttt-----------------tttttttttgagatgaagtctcattcttgtcctccaggctggagagaaatagcgtgatctcg----gctcactgtaacctctgcctcccgggttcaagtgattctcctgcctctgcctcccaagtagctgggattacaggtgcccaccaccacgcccagctaatttttgtattgtttagtagagacggggtttcaccacgttggccaggctggtttcaaactcctggcctcatgtgatccgcccacctcagcctcccaaagtgct-agattataggcatgagccaccgcacccagccCATATCCTGCTTTTT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163892864 323 + 165299245 CATAGGccgc------------------tttttttgtttgtttgtttgtttgtttgtttttgagatgaagtctcattcttgtcctccaggctggagagaaatagcgtgatctcg----gctcactgtaacctccgcctccctggttcaagtgattctcctgcctctgcctcccaagtagctgggattacaggtgcccaccaccacgcccagctaatttttgtattgtttagtagagacggggtttcaccacgttggccaggctggtttcgaactcctgg------------------cctcagcctcccaaagtgct-agattataggcatgagccaccgcacccagcccatatcCTGCTTTTT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96680089 315 + 98384682 CACC---------------------------tttt-----------------tttttttttgagatgaagtctcattcttttcctccaggctagagagaaatagcatgatctcg----gctcactgtaacctctgcctcccaggttcaagtgattctcctgcctctgccttccaagtagctgggattacaggtgcccaccaccatgcccagctaatttttgtattgtttagtagagacggggtttcaccacgttggccaggctggtttcgaactcctggcctcatgtgatccgcccgcttcagcctcccaaagtgct-agattataggcatgagccaccatgcccagccCATATCCTGCTTTTT i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169881291 0 + 171630274 C e canFam3.chr1 56173082 6728 + 122678785 I a score=1334623.000000 s hg38.chr6_KB021644v2_alt 103005 478 + 185823 AAAGAGCAATATACGTCTCCAGTTCTTCTCTCAAATCTTTTACA-TCAGTTTATCAGGAAGCCACTGAGTATCCCAGACTGGATGGGTAGATCTGTACAATGGCAAACATTCACGAGATGAAGAAAACACGAACACTTCTAAGTAGACAAAGCCGTAAGGAAGTGAGCTATTTACGTAATTATGTATGTACAAAAGTATACATGTAAATAAATGCCTATATCAATGTATGTCTATGTAAATTTGGGCAAATATACACATATGGGTGTAAATATAATGCTGGAGGCAGTGCCTCCTTATTTACATCCATGAAAGTGCTGTCATatagtatgacgatgcctcaaggatacagaaccagaaataccatttgacccggcaattccattactgggcatatacccaaaggaatctaaagcattctcctataaagacacatgcacacgtatgcttattgcagcactgtttacaatagcaaagacat s panTro4.chr6 170687009 478 + 172623881 AAAGAGCAATATGTGTCTCCAGTTCTTCTCTCAAATCTTTTACA-TCGGTTTATCAGGAAGCCACTGAGTATCCCAGACTGGATGGGTTGATCTGTACAATGGCAAACATTCATGAGATGAAGAAAACACGAACACCTCTAAGTAGACAAAGCCGTAAGGAAGTGAGCTATTTACGTAACTATGTATGTACAAAAGTGTACATGTAAATAAATGCCTATATCAATGTATGTCTATGTAAATTTGGGCAAATATACACATATGGGTGTAAATATAATGCTGGAGGCAGTGCCTCCTTATTTACATCCTTGAAAATGCTGTCATacagtatgatgatgcctcaagaatccagaaccagaaatgccatttgacccagcaattccattactgggcacatacccaaaggaatctaaagcattctcctataaagacacatgcacacgtatgcttattgcagcactgtttacaatagcaaggacat i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172435981 474 + 174210431 AAAGAGCAATATACATCTCCAGTTCTTCTCTCAAATCTTTTACA-TCGGTTTATCAGGAAGCAACTGAGTATCCCAGACTGGATGGGTAGATCTGTACAGTGGCAAACATTCATGAGATGAAGAAAACACGAACACTTCTAAGTCAACAAAGCCGTAAGGAAGTGAGCTATTTATGTAAC----TACATACAAAAGTATACATGTAAATAAATGCCTATATCAATGTATGTCTATTTAAATTTGGGCAAATACACACATATAGGTGTAAATATAATGCTGGAGGCAGTGCCTCCTTATTTACATCCGTGAAAATGCTGTCATacagtatgatgatgcctcgaggatccagaaccagaaataccatttgacccggcaattccattactgggtatatacccaaaggaatctgaagcattctactataaagacacatgcacacgtatgcttgttgcagcactatttacaatagcaaagacat i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156300787 478 + 157873769 AAAGGGCAATATGCGTCTCCAGTTCTTCTCTCAAATCTTTTACA-TCGGTTTATCAGGAAGCCACTGAGTATCCCAGACTGGATGGGTGGATCTGTACAATGGCAAACATTCATGAGATGAAGAAAACACGAACATCTCTAAGTAGACAAAGCCGTAAGGAAGTGAGCTATTTACGTAACTATATATGTACAAAAGTATACATGTAAATAAATGCCTGTATCAATGTATGTCTATGTAAATTTGGGCAAATATACACATATAGGTGTAAATATAATGCTGGAGGCAGTGCCTCCTTATTTACATCCATGAAAATGCTGTCATacagtatgacgatgcctcaaggatctagaaccagaaataccatttgacccagcaattccattactgggcatatacccaaaggaatctaaagcattctactataaagacacatgcacacgtatgcttattgcagcactatttacaatagcaaagacat i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168120411 478 + 169853907 AAAGAGCAATATGCATCTCCAGTTCTTCTCTCAAATCTTTTACATTCAGTTTATCAGGAAGCCACTGAGTATACCAAACCGGATGGGTAGATCTGTGCAATGGCAAACATTCCTAAGGTGAAGAAAACACGAACACTTCTCAGTAGACAAAGCCATAAGGAATTGAGCTATTTACGTAATTAGGTATGTACAAAAGTGTACATGTAAATAAATGCCTATATAAATGTATGTCTATGCAAATGTGAGCAAATATACACATATAGGTGTGAATATAATGCTGGAGGCAGTGCCTGCTTA-TTACACCCGTGAAAATGCTGTCagacagtatggcgatgcctcaaggatctagaaccagaaataccattggacccggcaatcccattactgggtatatacccaaaggaatataaatcattctactataaagacacatgcacatgtatgtttattgcagcactatttacaatagcaaagacac i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169075497 478 - 170955103 AAAGAGCAATATGCATCTCCAGTTCTTCTCTCAAATCTTTTACATTCAGTTTATCAGGAAGCCACTGAGTATACCAAACCGGATGGGTAGATCTGTGCAATGGCAAACATTCCTAAGGTGAAGAAAACACGAACACTTCTCAGTAGACAAAGCCATACGGAATTGAGCTATTTACGTAATTAGGTATGTACAAAAGTGTACATGTAAATAAATGCCTATATAAATGTATGTCTATGCAAATGTGAGCAAATATACACATATAGGTGTGAATATAATGCTGGAGGCAGTGCCTGCTTA-TTACACCCGTGAAAATGCTGTCagacagtatggcgatgcctcaaggatctagaaccagaaataccattggacccggcaatcccattactgggtatatacccaaaggaatataaatcattctactataaagacacatgcacatgtatgtttattgcagcactatttacaatagcaaagacac i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163893187 478 + 165299245 AAAGAGCAATATGCATCTCCAGTTCTTCTCTCAAATCTTTTACATTCAGTTTATCAGGAAGCCACTGAGTATACCAAACCGGATGGGTAGATCTGTGCAATGGCAAACATTCCTAAGGTGAAGAAAACACGAACACTTCTCAGCAGACAAAGCCATAAGGAATTGAGCTATTTACGTAATTAGGTATGTACAAAAGTGTACATGTAAATAAATGCCTATATAAATGTTTGTCTATGCAAATGTGAGCAAATATACACAGATAGGTGTGAATATAATGCTGGAGGCAGTGCCTGCTTA-TTACACCCGTGAAAATGCTGTCAGACAGTATGGCAAtgtctcaaggatctagaaccagaaataccatttgaactagcaatcccattactgggtatatacccaaaggaatataaagcattctactataaagacacatgcacacgtatgtttattgcagcactatttacaatagcaaagacac i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96680404 478 + 98384682 TAAGAGCAATATGCATCTCCAGTTCTTCTCTCAAATCTTTTACATTCAGTTTATCAGGAAGCCACTGAGTATACCAAACCGGATGGGTAGATCTGTGCAATGGCAAACATTCCTAAGGTGAAGAAAACACAAACACTTCTCAGTAGACAAAGCCATAAGGAATAGAGCTATTTACGTAATTATGTGTGTACAAAAGTGTACATGTAAATAAATGCCTATGTAAATATATGTCTATGCAAATTTGAGCAAATGTACACAGATAGGTGTGAATATAATGCTGGAGGCAGCGCCTCCTTA-TTACACCCGTGAAAATGCTGTCagacagtatggcgatgcctcaaggatctagaaccagaaataccatttgaaccagcaatcccattactgggtatatacccaaaggaatataaagctttctactataaagacacatgcacatgtatgtttattgcagcactatttacaatagcaaagacac i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169881291 477 + 171630274 AAACAGCAGTGTGTGTCTCCAGTTCTTCTCTGAAATCTTTTACATTTGGTTGATCAGGAAGGTGCTGAGGAGAACAGACGGGACCGGTGGATCTGTACGATGACAAACTTCCATGAGACGAAGAAAGCATTAGCATCTCTAAGTAAACAAAGCCATAAGTAAATGAGTTATTTATGTAACTACGTATGTAC-AGAGTACACACGTAAGTAAATGCCTCTATAAATTTATGCCTGTGTACGTTTGTGCAAATAGACACATATAGGTATGAATATAATGCAGGAGGCAGTG-TTCCTAATTAACACCCTTGAAAattctgtaacagagtagagcgacgcctcaaggatcgagaaccagaaataccatttgatttggcaattccatcactgggtacatccccaaaggaaaataaatcattctactataaagacacatgcacgtgtatgtttatttcagcactgtttacaatagcaaagacat i calJac3.chr4 C 0 I 1108 e canFam3.chr1 56173082 6728 + 122678785 I a score=1060386.000000 s hg38.chr6_KB021644v2_alt 103483 377 + 185823 agaacctacccaaaggcccatcaatgatagactagataaagaaaatgtggtacatatacaccatgggatactatgcagccataaaaaggg-taagttcacgtcctttacagggacatggatggagctggaagtcatcatcctcagcaaactaacacaggaacagaaaaccaaacaccgcatgttctcactcatgagtgggagctgaacattgagaacacatggacaca-gggaggggaacatcacacaccagggcctgttggaag--gtggggtgaggagagggaac-----ggacgggtcagtaggtgcagcaaaccaccatggcatacatgtacctatgtaagaaacctgcacgttctgcacatgtatcctg---tttttttttttt s panTro4.chr6 170687487 380 + 172623881 agaacctacccacatgcccatcaatgatagactagataaagaaaatgtggtacatatacaccatgggatactatgcagccataaaaaggg-taagttcacgtcctttacagggacatggatggagctggaagtcatcatcctcagcaaactaacacaggaacagaaaaccaaacaccacatgttctcactcatgagtgggagctgaacattgagaacacatggacaca-aggaggggaacatcacacaccagggcctgttggaag--gtggggtgaggagagggaac-----ggacgggtcagtaggtgcagcaaaccaccacggcacacatgtacctatgtaagaaacctgcacattctgcacatgtatcctgttttttttttttttt i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172436455 383 + 174210431 agaacctacccaaatgcccatcaatgatagactggataaagaaaatgtggtacatatacactatgggatactatgcagccataaaaagggataagttcacgtcctttgcagggacatggatgaagctggaagtcatcatcctcagcaaactaacacaggaacagaaaaccaaacatctcatgttctcactcatgagtgggagctgaacattgagaacacatggacaca-gggaggggaacatcacacaccaaggcctgttggaag--gtgaggcgaggagagggaacttagaggatgggtcagtaggtgcagcaaaccaccatggcacacatgtacctatgtaagaaacctgcacattctgcacatgtatTGTG---TTTTTTTTTTTT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156301265 387 + 157873769 agaacctacccaaatgcccatcaatgataggctggataaagaaaatgtggtacatatacaccatggaacactatgcagccataaaaagggataagttcacatcctttgcagggacatggatgaagctggaagtcatcatcctcagcaaactaacataggaacagaaaaccaaacatcgcatgttctcactcatgagtgggagctgaacattgagaacacctggacacaggggaggggaacgtcacacaccacggcctgttggaag--gtagggtgaggagagggaacttagaggacgggtcagtaggtgcagcaaaccaccatggcacacttgtacctatgtaaggaacctgcacgttctgcacatgtatcctgttttttTTTTTTTTT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168120889 385 + 169853907 agaacctacccaaatgcccatcaatgatagactggataaagaaaatgtggcacatatacaccatggaatactatgcagccataaaaagaaatgagttcgtgtcctttgcagggtcatggatgaagctagaagccatcatcctcagcaaactaacacaggaacagaaaaccaaacactacatcttctcacttatgagtgggagctaaacattgagaacacatagacaca-gagagtggaacaatacacatcacagcctattggggggtggggagtgagggcagggaacttagagaacgagtcagtaggtgcagcaaaccaccatggcacacgtatacctatgtaagaaacctgcacgttctgcacatgtaccctg---tttgtttgtttt i rheMac3.chr4 C 0 I 35 s macFas5.chr4 169075975 385 - 170955103 agaacctacccaaatgcccatcaatgatagactggataaagaaaatgtggcacatatacaccatggaatactttgcagccataaaaagaaatgagttcgtgtcctttgcagggtcatggatgaagctagaagtcatcatcctcagcaaactaacacaggaacagaaaaccaaacactgcatcttctcacttatgagtgggagctaaacattgagaacacatagacaca-gagagtggaacaatacacatcacagcctattggggggtggggggtgagggcagggaacttagagaacgagtcagtaggtgcagcaaaccaccatggcacacgtatacctatgtaagaaacctgcacattctgcacatgtaccctg---tttgttTGTTTT i macFas5.chr4 C 0 I 14 s papAnu2.chr4 163893665 385 + 165299245 agaacctacccaaatgcccatcaatgatagactggataaagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaggaatgaattcgtgtcctttgcagggtcatggatgaagctggaaaccatcattctcagcaaactagcaaaggaacagaaaaccaaacactgcatgttctcactcatgagtgggagctaaacattgagaacacatagacaca-gagagTGGAACAACACCCATCAGGGCctattggggggtggggggtgagggcaGGGAACTTAGAGAACGAGtcagtaggtgcagcaaaccaccatggcacacgtatacctatgtaggaaacctgcacgttctgcacatgtaccctg---tttttttgtttt i papAnu2.chr4 C 0 I 14 s chlSab2.chr13 96680882 381 + 98384682 agaacctacccaaatgcccatcaatgatagactgaataaagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaggaatgagttcgtgtcctttgcagggtcatggatgaagctggaagtcatcatcctcagcaaactaacacaggaacagaaaaccaaacactgcatgttctcactcatgagtgggagctaaacattgagaacacatagacaca-gagagcggaacaacacacatcagggcctattgggg---gtggggtgggggcagggaacttagagaacgagtcagtaggtgcagcaaaccaccatagcacatgtatacctatgtaagaaacctgcacgttctgcacat-taccctg---ttttttTGTTTT i chlSab2.chr13 C 0 I 19 s calJac3.chr4 169882876 381 + 171630274 ggaaccaacccaaaaccccatcagttgtagactggataaagaaaatgtggtacatacacaccatagaatactatgcagctataaaaaagaatgagatcatgtcctttgcagggacatggatgaggctggaagccattatcctcagcaagctaacacaggcacagtaaaccaaacacctcatgttctcactcataagtgggagttgaacaatgagaacacagcgactta-gggaggggaacatcacataccaggatctgttggggg-tggggggtgaagggagggaacttagaggatgggtcagtaggtgcagcaaaccaccacggcacacatatacctatgtaatgaacctgcacgttctgcacgtgtgtgctg---tatcttttt--- i calJac3.chr4 I 1108 C 0 e canFam3.chr1 56173082 6728 + 122678785 I a score=12223.000000 s hg38.chr6_KB021644v2_alt 103860 16 + 185823 ttagaagaaa-tttttt s panTro4.chr6 170687867 17 + 172623881 ttagaagaaattttttt i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172436838 16 + 174210431 TTAGAAGACT-TTTTTT i ponAbe2.chr6 C 0 I 1756 s nomLeu3.chr3 156301652 17 + 157873769 TTTGAAGAAAGTTTTTT i nomLeu3.chr3 C 0 I 1 s macFas5.chr4 169076374 16 - 170955103 TTAGAAGAAA-TCAAAC i macFas5.chr4 I 14 C 0 s papAnu2.chr4 163894064 16 + 165299245 ttagaagaaa-tcaaac i papAnu2.chr4 I 14 C 0 s chlSab2.chr13 96681282 16 + 98384682 TTGGAAGAAA-TCAAAC i chlSab2.chr13 I 19 C 0 s calJac3.chr4 169883257 11 + 171630274 --agaagaaa-ttt--- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56173082 6728 + 122678785 I e rheMac3.chr4 168121274 35 + 169853907 I a score=7214.000000 s hg38.chr6_KB021644v2_alt 103876 4 + 185823 aaaa s panTro4.chr6 170687884 4 + 172623881 aaaa i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172438610 4 + 174210431 AAAA i ponAbe2.chr6 I 1756 C 0 s nomLeu3.chr3 156301670 4 + 157873769 TAAA i nomLeu3.chr3 I 1 C 0 s macFas5.chr4 169076390 4 - 170955103 AAAA i macFas5.chr4 C 0 I 1 s papAnu2.chr4 163894080 4 + 165299245 aaaa i papAnu2.chr4 C 0 I 1 s chlSab2.chr13 96681298 4 + 98384682 AAAA i chlSab2.chr13 C 0 I 1 s calJac3.chr4 169883268 2 + 171630274 --aa i calJac3.chr4 C 0 C 0 e canFam3.chr1 56173082 6728 + 122678785 I e rheMac3.chr4 168121274 35 + 169853907 I a score=3769812.000000 s hg38.chr6_KB021644v2_alt 103880 1355 + 185823 aaagaaaGGAAAATGCTGTCATCGATGAGAATAGAAGCCCCAGAGTCTCTGTTTTCCTAACAGAGGGACTGTTTGCACTGTGGGTGCGATAGAACAGCTCCTGCCCTG-TAACTCAGTGCTTGGGACTCTTGGCATCAT-------------------GAGATGCCCTGAATTACTGGGATCATCCAAGTCTCCCTAGAAACTGTGTGGAAAC--ATAGGTCACAGGCGCTTCTGTGTGTCTTATAAAGACAAGGCTGCTCCAGCAGgtaagctgaaagtcacgtcctaag-cccccaacagtctgaatgggctccttgtctcagtgaaaggcattctgaagttaacctgaaaatctagcttaggccacgatgggaagt-gggaggtgtcagacgggcctccttataccctcctccctttggagttcagacacaactgaccagcattcacattaaaacagagatcttaagactttttgtaggaatg--actgaattccgtcctgagtctagtatagcatcccatgacagcaggccctaaagcaaatggaagtattttaccctaaaatatattttgttgacatattttggaatgtccctgcaaagctgtctgttgtaggaaaatctacattctgtagagaatccctctccctttccaggccttttccctgatctaagagagaattaactaaaagtctggcaccttataagtctgataagagacacttgctgtgggttctttctgagtctgcgccctggaggctgcgtctgcattataagaa-cttggtctccacagcccttaccttaaccaggctctgctttctatggattccaggcctttaggtaaaaacttaactctttcaaccgactgccaatcagaaaatctttgaatacacctatgacctggaagcccccaccaccacttccagttgtcctgccttcctggaccaaacccctatgcaccttacatgtcttgatggatgacttatgtctccccaaaatctacaaaaaagcaagctgtaccctgaccacctgggacgcttgttgtcaggtacccctgaggc--tgtcatgggcatgtcctctatcttggcaaaataaacatctgaatccattgagac-------ttgtctcagaggccttctggtttaTGAACAGGTGGAATGGCACTGCTCTCTGCCTGGGCTACTGGGACCGAGACA--GACGGCCGCACCCTTAGCCCCCTTGCAGAGAGCAGCAACATCACCGGGACAATCTTCTCCCAGGCTGTGTCCGTGCTGTTTGTCCTCATGCTCAGCTTTTCTGATTTCCGGAACATTCCTTCATCTGAGCCCCTTTGTTAAGGGCTGCTGGAGGTCGGCGTGTGGCCGGGTGCACTAAGCTGTGATTCTA s panTro4.chr6 170687888 1353 + 172623881 aaagaaaGGAAAATGCTGTCATCGATGAGAATAGAAGCCCCAGAGTCTCTGTTTTCCTAACAGAGGGACTGTTTGCACTGTGGGTGTGATAGAGCAGCTCCTGGCCTG-TAACTCAGTGCTTGGGACTCTTGGCATCAT-------------------GAGATGCCCTGAATTACTGGGATCATCCAAGTCTCCCTAGAAACTGTGTGGAAAC--ATAGGTCACAGGCGCTTCTGTGTGTCTTATAAAGACAAGGCTGCTCCAGCAGgtaagctgaaagtcacgtcctaagccccccaacaatctgaacgggctccttgtctcagtgaaaggccttctgaagttaacctgaaaatctagcttaggccacgatgggaagt-gggaggtgtcagacgggcctccttataccctcctccctttggagttcagacacaactgaccagcattcacattaaaacagagatcttaagactttttgtaggaatg--actgaattccgtcctgagtctagtatagcatcccatgacagcaggccctaaagcaaatggaagtattttaccctaaaatatatt---ttgacatgttttggaatgtccctgcaaagctgtctgttgtagggaaatctacattctgtagagaatccctctccctttccaggccttttccctgatctaggagagaattaactaaaagtctggcaccttataagtctgataagagacacttgctgtgggttctttctgagtctgcgtcctggaggctgcatctgcattataagaa-cttggtctccacagcccttaccttaaccaggctctgctttctatggattctaggcctttagataaaaacttaactctttcaaccgactgccaatcagaaaatctttgaatacacctatgacctggaagcccccaccaccacttccagttgtcctgccttcctggaccaaacccctatgcaccttacatgtcttgatggatgacttatgtctccccaaaatctacaaaaaagcaagctgtaccctgaccacctgggacgcttgttgtcaggtacccctgaggc--tgtcatgggcatgtcctcaatcttggcaaaataaacatctgaatccattgagac-------ttgtctcagaggccttctggtttaTGAACAGGTGGAATGGCACTGCTCTCTGCCTGGGCTACTGGGACCGAGACA--GACAGCTGCACCCCTAGCCCCCTTGCAGAGAGCAGCAACATCACTGGGACAATCTTCTCCCAGGCCGTGTCCATGCTGTTTGTCCTCATGCTCAGCTTTTCTGATTTCCGGAACATTCCTTCATCTGAGCACCTTGGTGAAGGGCTGCTGGAGGTCGGCGTGTGACCTGGTGCACTTAGCTGTGATTCTA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172438614 1358 + 174210431 AAAGAAAGGAAAATGCTGTCATCGATGAGAATAGAAGCCCCAAAGTCTCTGTTTTCCTAACAGAGGAACTGTTTGCACTGTGGGTGCGACAGAGTAGCTCCTGCCCTG-TAACTCAGTCCTTGGGACTCTTGGCATCAT-------------------GAGATGCCCTGAATCACTGGGATCATCCAAGTCTCCCTAGAAACTGTGTGGAAAC--ACAGGTCACAGGCACTTCTGTGTGTCTTATAAAGACAAGGCTGCTCCAGCAtgtaagctgaaagtcacattctaagccccccaccaatctgaatgggctccttgtctcagtgaaaggcattctgaagttaacctgaaaatctagcttaggccacgatgggaagc-gggaggtgtcagacggggctccttatacccccctccctttggagttcagacacaactgaccagcattcacattaaaacagagatcttaagactttttgtagcaatgacactgaattccgtcctgagtctagtatagcatcccatgacagcaggccctaaagcaaatggaagtattttaccctaaaatatattttgttgacatattttggaatgtccctgcaaagctgtctgtcgtgggaaaatctacattctgtagagaatccctctccctttccaggccttttccctgatctatgagagaattaactaagagactggcaccttataagtctgatgagaaacacttgctgtgggttctctctgagcctgcatcctggaggctgcatctgcattataagaaccttggtctccacagcccttaccttaaccaggctctgctttctatggattccaggcctttagataaaaacttaactctttcaactgactgccaatcagaaaatctttgaatacacctatgacctggaagcccccaccaccactttcagttgtcctgccttcctggaccaaacccctatgcagcttacatgtcttgatggatgacttatgtctcccaaaaatctacaaaatc-caagctgtaccctgaccacctgggacgcttgttgtcaggtacccctgaggc--tgtcatgggcatgtcctcagtcttggcaaaataaacatctgaatccattgagac-------ttgtctcagatgccttctggtttaTGAACAGGTGGAATGGCACTGCTCTCTGCCTGGGCTGCTGGGACCAAGACA--GACGGCTGCACCCCTAGGCCCCTTGTGGAAAGCAGCAACATCACCGGGACAATCTTCTCCCAGGCCGTGTCCATGCTCTTTGTCCTCATGCTCAGCTTTTCTGATTTCCGGAATATTCCTTCATCTGAGCAACTTTGTTAAGGGCTGCTGGAGGTCGGCGTGTGACCTGGTGCACTTAGCTGTGATTCTA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156301674 1331 + 157873769 AAAGAAAGGAAAATGCTGTCATCAATGGGAATAGAAGCCCCAAAGGCTCTGTTTTCCTAA-------AACGTTTGCACTATGGGTGCGATAGAGCAGCTCCTGCCCTG-TAACTCAGTCCTTGGGACTCTTGGCATCATGAGTCAGATGCAACTTTAAGAGAAGCCCTGAATCACTGGGATCATCCACGTCTCCCTAGAAACTGTGTGGAAAC--ATAGGTCACAGGTGCTTCTGTGTGTCTTATAAAGACAAGGCTGCCCCAGCAtgtaagctgaaagtcacattctacgccccgcaacaatccgaatgggctccttgtctcagtgaaaggcattctgaagttaacctgaaaatctagcttaggccacgatgggaagt-gggaggtgtcagatgggcctccttatacccccctccctttggagttcagacacaactgaccagcattcacatacaagcaaagatcttaagactttttgtagcaatg---------------------------------------acagcaggccctaaagcaaatggaagtattttaccctaaaatgtattttgttgacatattttggagtgtccctgcaaagctgtctgttgtgggaaaatctacattctgtagagaatccctctccctttccaggccttttccctgatctaggagggaattaactaagagtctggcaccttataagtctgataagaaacactcgctgtgggttctctctgagcctgcgtcctggagcctgcatctgcattataagaaccttggtctccacagcccttaccttaaccaggctctgctttctatggattccaggcctttagataaaaacttaactctttcaaccgactgccaatcagaaaatctttgaatacacctatgacctggaagcctccaccaccgctttcagttgtcctgccttcctggaccaaacccctatgcaccttacatgtcttgatggatgactaatgtctcccaaaaatctacaaaaaagcaagctgtaccctaatcacctgggacgcttgttgtcaggtacccctgagac--tgtcatgggcatgtcctcaatcttggcaaaataaacatctgaatccattgagac--------tgtctcagatgccttctggtttaTGAACAGGTGGAATGGCACTGCTCTGTGCCTGGGCTGCTGGGGCCGAGACA--GACGGCTGCACCCCTAGCCCCCTTGCGGAGAGCAGCAACATCACCGGGACAATCTTCTCCCAGGCCGTGTCCATGCTCTTTGTCCTCATGCTCAGCTTTTCTGATTTCCAGAACATTCCTTCATCTGAGCACCTTTGTTAAGGGCTGCTGGAGGTCGGCGTGTGACCTGGTGCACTTAGCTGTGATTCTA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168121309 1367 + 169853907 aaAGAAAGGAAAATG-TGTCATCCGTCAGAATAGAAGCCTCAAAGGCTCTATTTTCCTA--------AGCGTTTGCACTGTGGGTGTGATAGAGCAGCTCCTGCACTG-TAACTCGGTCCTTGGGACTCTTGGCATCATGAGTCAGATGCAACTTTAGGAGAAGCCCTGAATTGCT-CGATGATCCAAGTCTCCCTGGAAACTGTGTGGAAACACATAGGGCACAGAGGCTTCCGTGCGTCTTATAAAGACAAGGCTGCTCCACCAtgtaagctgaaagtcacattctaaacctcccaacaatctgaatgggctcctcgtctcagtgaaaggcattctgaagttaagctgaaaattgagcttaggccatggtgggaagt-ggggggtgtcagacgggtctccttatacccccctccctttggagttcaggcacaactgaccagcattcacattaaaacagagatcttaagactttttgtagcaatgacactgaattccgttctgagtctagtatagcatcccatgacagcaggccctaaagcaaatggaagtattttaccctaaaatgtatttcgttgacatattttggaatgtccctgcaaagctgtctgttgtgggaaaatctacattctgtcgagaatccctctccctttccaggccttttccgtgatctaggagagaattaacgaagattctggcaccttagacgtctgataagaaacacttgccatgggatctctctgagcctgcatcctggaggctgaatctgcattataagaaccttggtctccacagcccttaccttaaccaggctctgcttcctatggattccaggcctttagat-aaaacttaactc--tcaacctattgccaatcagaaaatctttgaatacacctatgacctggaagcccccaccaccacttccagttgtcctgccttcctggaccaaacccctatgcaccttacatgtcttgatggatgacttatgtctcccaaaaatccataaaaaagcaagctgcaccctgacctcctggggtgcttgttgtcaggtgcccctgaggc--tgtcatgggcatgtcctcaatcttggcaaaataaatatctgaatccactgagac-------ttgtctcggatgccttctggtttcTGAACAGGTGGAATGGCACTGCTGTCTGCCTGGGCTGCTGGGACCGAGACA--GACAGCTGCACCTCTAGCCCCCTTGCGGAGAGCAGCAACATCACCAGGACGATCTTCTTCCAGGCCGTGCCTGTGCTCTTCGTCTTCATGCTCAGCTTTTCTGATTTCCAGAACATTCCTTCATCCGAGCACCTTTGTTAAGGGCAGCTGGAGGTCTGCGTGTGACCTGGTGCACTTAGCTGTCATTCTA i rheMac3.chr4 I 35 C 0 s macFas5.chr4 169076395 1367 - 170955103 AAAGAAAGAAAAATG-TGTCATCCGTCAGAATAGAAGCCTCGAAGGCTCTATTTTCCTA--------AGCGTTTGCACTGTGGGTGTGATAGAGCAGCTCCTGCACTG-TAACTCGGTCCTTGGGACTCTTGGCATCATGAGTCAGATGCAACTTTAGGAGAAGCCCTGAATTGCT-CGATGATCCAAGTCTCCCTGGAAACTGTGTGGAAACACATAGGGCACAGAGGCTTCCGTGCGTCTTATAAAGACAAGGCTGCTCCACCAtgtaagctgaaagtcacattctaaacctcccaacaatctgaatgggctcctcgtctcagtgaaaggcattctgaagttaagctgaaaattgagcttaggccatggtgggaagt-ggggggtgtcagacgggtctccttatacccccctccctttggagttcaggcacaactgaccagcattcacattaaaacagagatcttaagactttttgtagcaatgacactgaattccgttctgagtctagtatagcatcccatgacagcaggccctaaagcaaatggaagtattttaccctaaaatgtatttcgttgacatattttggaatgtccctgcaaagctgtctgttgtgggaaaatctacattctgtcgagaatccctctccctttccaggccttttccgtgatctaggagagaattaacgaagagtctggcaccttagacgtctgataagaaacacttgccatgggatctctctgagcctgcatcctggaggctgaatctgcattataagaaccttggtctccacagcccttaccttaaccaggctctgcttcctatggattccaggcctttagat-aaaacttaactc--tcaaccgattgccaatcagaaaatctttgaataaacctatgacctggaagcccccaccaccacttccagttgtcctgccttcctggaccaaacccctatgcaccttacatgtcttgatggatgacttatgtctcccaaaaatccataaaaaagcaagctgcaccctgacctcctggggtgcttgttgtcaggtgcccctgaggc--tgtcatgggcatgtcctcaatcttggcaaaataaatatctgaatccactgagac-------ttgtctcggatgccttctggtttcTGAACAGGTGGAATGGCACTGCTGTCTGCCTGGGCTGCTGGGACCGAGACA--GACAGCTGCACCTCTAGCCCCCTTGCGGAGAGCAGCAACATCACCAGGACGATCTTCTTCCAGGCCGTGCCTGTGCTCTTCGTCTTCATGCTCAGCTTTTCTGATTTCCAGAACATTCCTTCATCCGAGCACCTTTGTTAAGGGCAGCTGGAGGTCGGCGTGTGACCTGGTGCACTTAGCTGTCATTCTA i macFas5.chr4 I 1 C 0 s papAnu2.chr4 163894085 1365 + 165299245 aaagaaaggaaaatg-tgtcATCCATCAGAATAGAAGCCCCAAAGGCTCTCTTTTCCTA--------AGCATTTGCACTGTGGGTGTGATAAAGCAGCTCCTGCAC-G-TAACTCGGTCCTTGGGACTCTTGGCATCATGAGTCAGATGCAACTTTAGGAGAAGCCCTGAATTGCT-CGATGATCCAAGCCTCCCTGGAAACTGTGTGGAAACATATAGGGCACAGACGCTTCCGTGCGTCTTATAAAGACAAGGCTGCTCCACCATGTAAGCTGAAAGTCACATTCTAAAACCCCCAACAATCTGAATGGGCGCCTCGTCTCAGTGAAAGGCATTCTGAAGTTAAGCTGAAAATTGAGcttaggccaaggtgggaagt-gGGGGGTGTCAGACGGGTCTCCTTATACCCCCCTCCCTTTGGCGTTcagacacaactgaccagcattcacattaaaacagagatcttaagactttTTGTAGCAATGACCCTGAATTCCGTCCTGAGTCTAGTAGAGCATCCCATGACAGCAGGCCCTAAAGCAAATGGAagtattttaccctaaaatatatttcGTTGACATATTTTGGAATGTCCCTGCAAAGCTGTCTGTTGTGGGAGAATCTACATTCTGTCGAGAATCCCTCTCCCTTTCCAGGCCTTTTCCGTGGTCTaggagagaattaactaagagtctggcaccttaGACGTCTGCTAAGAAACACTTGCCAT--GATCTCTCTGAGCCTGCATCCTGGAGGCTGCATCTGTATTATAAGAACCTTGGTGTCCACAGCCCTTACCTTAACCAGGCTCTGCTTTCTATGGATTCCAGGCCTTTAGATAAAAACTTAACTC--TCAACcgattgccaatcagaaaatctttgaatacacctatgacctggaagcccccaccaccacttccagttgtcctgccttCCTGGACCAAACCGCTATGCACCTTACATGTCTTGATGGATGACTTATGTCTCCCAAAAATCCATAAAAAAGCAAGCTGCACCCTGACCTCCTGGGGTGCTTGTTGTCAGGTGCCCCTGAGGC--TGTCATGGGCGTGTCctcaatcttggcaaaataaatatctgaatcCATTGAGAC-------TTGTCTCGGATGCCTTCTGGTTTCTGAACAGGTGGAATGGCACTGCTGTCTGCCTGGGCTGCTGGGACCGAGACA--GACGGCTGCACCTCTAGCCCCCTTGCGGAGAGCAGCAACATCACCAGGACGATCTTCTTCCAGGCCGTGCCTGTGCTCTTCGTCTTCATGCTCAGCTTTTCTGATTTCCAGAACATTCCTTCATCCGAGCACCTTTGTTAAGGGCAGCTGGAGGTCGGCGTGTGATCTGGTGCACTTAGCTGTCATTCTA i papAnu2.chr4 I 1 C 0 s chlSab2.chr13 96681303 1368 + 98384682 AAAGAAAGGAAAATGCTGTCATCCATCAGAACAGAAGCCTCAAAGCCTCTCTTTTCCTA--------AGCGTTTGCACTGTGGGTGTGATAGAGCAGCTCCTGCACTG-TAACTCGGTCCTTGGGACTCTTGGCATCATGAGTCAGATGCAACTTTAGGAGAAGCCCTGAATTGCT-CGATGATCCAAGTCTCCCCGGAAACTGTGTGGAAACATATAGGGCACAGACGCTTCCATATGTCTTATAAAGACAAGGCTGCTCTACCAtgtaagctgaaagtcacattctgaaccccccaacaatctgaatgggctcctcgtctcagtgaaaggcattctgaagttaagctgaaaattgagcttaggtcacggtgggaagt-ggggggtgccagacgggtctccttatacccccctccctttggagttcagacacaactgaccagcattcacattaaaacagagatcttaagactttttgtagcgatgacactgaattccatcctgagtctagtatagcatcccatgacagcaggccctatagcaaatggaagtattttaccctaaaatatatttcgttgacatattttggaatgtccctgcaaagctgtctgttgtgggaaaatctacattctgtcgagaatccctctccctttccaggccttttccgtggtctaggagagaattaactaagagtctggcaccttatacgtctgataagaaacacttgccatgggatccctctgagcctgcatcctggaggctgcatctgtattataagaaccttggtctccacagcccttaccttaaccaggcttggctttctatggattccaggcctttagat-aaaacttaactc--tcaaccaattgccaatcagaaaatctttgaatacacctatgacctggaagcccccaccaccacttccagttgtcctgccttcctggaccaaacccctatgcaccttacatgtcttgatggatgacttatgtctcccaaaaatccataaaaaagcaagctgcaccctgacctcctggggtacttgttgtcaggtgcccctgaggc--tgtcatgggcatgtcctcaatcttggcaaaataaatatctgaatccattgagac-------ttgtctcggatgccttctggtttcTGAACAGGTGGTATGGCACTGCTCTCTTCCTGGGCTGCTGGGACTGAGACA--GACAGCTGCACCTCTAGCCCCCTTGCGGAGAGCAGCAACATCACCAGGACGATCTTCTTCCAGGCCGTGCCTGTGCTCTTCGTCTTCATGCTCAGCTTTTCTGATTTCCAGAACATTCCTTCATCCAAGCACCTTTGTTAAGGGCAGCTGGAGGTCGGCGTGTGACCTGGTGCACTTAGCTGTCATTCTA i chlSab2.chr13 I 1 C 0 s calJac3.chr4 169883270 1348 + 171630274 aaaaaaaGAAAAATGCTGTCATCCATCAGAATAGAAGCCCCAAAGGCCCCATCTTCCTC--------AACATTTGCACTGTAGGTGCAACAGAGTAGCTCCCACACTGATAACTCGGAACTTTGGACTCTTGGCGTCATGAGGCAGATGCAAGTTTACGAGAAGCCC-GAATCACTGGCATTATCCAAGTCTCCCTGGAAACTGTGGAGACAC--CTAGG-CGCAGATGCTCCTGTGTGTCTTACAAAGACGGGGCTGTTCCAGCAtgtaagctaaaagtcacagtctaagacc-----caatcagaatgggctcttcctctcagcaaaaggcatcccg-agctaacctg-aaatctagttcaggccaagatgggaagtcgggggccgtcagacgtgcctgctcaca-ccttctccctttggagttcagacacgactgaccagcattcccatgaaagcagagatcttaagac-ttttgtagcaaggacactgaattccatcctgagtctcgtatcacgccccatgaccgcaggttctaaagcaaatggaagtatcttacactaaaatacagttctttgacatactttggaatgtccctgcaaagctgtctgttgtgggagaatctacattctgtagagaatccgtttccctttccaggccttgttcctgctctaggagagaatttaccaagagtctggcacctcttccatcagataagaagcacttgccatggattctcttgaagcctgcct-ggggaggctgcatctgc-----------cttgctctccacagctcttaccttaaacaggctctgttttctatgga-tccaggcctttacataaaaacttgggtctttcaactgatttctcatcagaaaacgtttgaatacccctctgaccagg-----ccccccaccacttccagctgccctgcctttctaaaccaaactgatagacaccctatatgtgttgatgggtgactcatgtctcccaaacatctataaaagagcgagctgtaccctgaccgcctggggcaggt-ctgtcaggcccccctgagcctgtgtcatgggcatttccttaatcttggcaaaataaacatctgcatcaattgagacttgtctcttgtctcagatgctttctggttcaTGAGCAGGTGGAATGGCACTGCTCTCTGCCTGGGCTGCTGAAACCGAAATGGCGGTGGCTGCACCCC--AGCCCCTTGAGGAGAGCAGCGACATCAACACAACG-TATTCTCTCAGGCCTCATCCATGC--TTTGTCTTCATGCTCAGCTTTTCTGATTTCCAGAATATTCCTTCATGTGAGCACGTTTGTTAAGAGCTGCTGGAGGTCGAGGTGTGAACTGGAACACATAGTTGTGATTCTA i calJac3.chr4 C 0 I 1105 e canFam3.chr1 56173082 6728 + 122678785 I a score=1391862.000000 s hg38.chr6_KB021644v2_alt 105235 503 + 185823 CCAATTCCGGGCTGAGGACTCATCCTGCAAGCCCCAGGCAGAGCTGCCTTGTCCATGAAACACCTGCTGCTCCTGACAAGTGCCCACCG--------------------------------------------TTTGT-GGGTGGCCTCATCTCCCCAGGGGCCCGGCCACTTTGGATGCAGACCTTCATTCTCACAGCTTCTGACCCCACCATCAGCCTGCTGCATCCAGTCAAGCAAACACGGTGTACGGTCACCACCTGCCTGCC----CCACGCAGATGCCGGCCAGCCACCCGC-------------GCCAACCGCTCCTCCTGGAAGTGGAGCAAGAGGATGAGGGAGCCAAGCCTGGGCTCCAACTCACTGGGTGCAAATGGGATATTTGCTGCCTTACAGAAAATCTTGCATGTGGAACCAATTGTATAGTGTTATAAAGTAGTGAGACCTGGATTTAAAAAATGACGCATGAACTTTTACATTCCATACAC-TTCAGTGGGCTGTTCCTCACCTGCACTGTGCTAGCCAGAAGCAGTGATGAGAGTCAGCTTCCTCA s panTro4.chr6 170689241 516 + 172623881 CCAATTCCAGGCTGAGGACTCGTCCTGCAAGCCCCAGGCAGAGCTGCCTTGTCCATGAAACACCTGCTGCTCCTGACAAGTGCCCACCG--------------------------------------------TTTGT-GGGTGGCCTCATCTCCCCAGGGGCCCGGCCACTTTGGATGCGGAGCTTCATTCTCACAGCTTCTGACCCCACCATCAGCCTGCTGCATCCAGTCAAGCAAACACGGAGCACGGTCACCACCTGCCTGCC----CCACGCAGATGCCAGCCAGCCGCCCGCGCCAACCACCTGTGCCAACCGCTCCTCCTGGAAGTGGAGCAGGAGGATGAGGGAGCCAAGCCTGGGCTCCAGCTCACTGGGTGCAAATGGGATATTTGCTGCCTTACAGAAAATCTTGCATGTGGAACCAATTGTATAGTGTTATAAAGTAGTGAGACCTGGATTTAAAAAATGACGCATGCCCTTTTACATTCCATACAC-TTCAGTGGGCTGTTCCTCACCTGCACTGTGCTAGCCAGAAGCAGTGATGAGAGTCAGCTTCCTCA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172439972 503 + 174210431 CAAATTCCAGGCTGAGGACTCACCCTGCAAGCCCCAGGCGGAATTGCCTTGTCCATGAAACACCTGCTGCTCCTGACAAGTGCCCACCG--------------------------------------------TTTCT-GGGTGGCCTCATCTCCCCAGGGGCCCAGCCACTTTGGATGCGGAGCCTCATTCTCACAGCTTCTGACTCCACCGTCAGCCTGCCGCATCCAGTCAAGCAAACATGGAGCACGGTCACCACCCGCCTGCC----CAACGCAGATCCCAGCCAGCCACCCGC-------------GCCAATCGCTCCTCATGGAAGTGGAGCAGGAGGATGAGGGAGCCAAGCCTGGGCTCCAAATTACTGGGTGCAAAGGGGATATTTGCTGCCTTACAGAAAATCTTGCATGTGGAACCAATTTTATAGTGTTATAAAGTAGTGAGACCTGGATTTTAAAAATGATGCGTGCACTTTTACATTCCATACAC-TTCAGTGGGCTGTTCCTCACCTGCACTGTCCTAGCCAGAAACAGTGATGAGAGTCAGCTTCCTCA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156303005 494 + 157873769 CAAATTCTGGGCTGAGCACTCACCCTGCAAGCCCCAGGTAGAGCTACCTTGTCCATGAAACACCTGCTGCTCCTGACAAGTGCCCACCA--------------------------------------------TTTCT-GGGTGGCCTCATCTCCCCAGGGACCCGGCCACTTTGGATGCGGAGCTTCATTCTCACAGCTTCTGACCCCACGGTCAGCCTGCTGCATCCAGTCAAGTGAACCCGGGGCATGGTCACCACCTGCCTGCC----CTACGCAGATGCCAGCCAGCCACGCAT-------------GCCAACCGCTCCTTCTGGAAGTGGAGCAGGAGGATGAGGGAGCCAAGCCTGGGCTCCAA-TCACTGGGTGCAAGCGGGATATTTGCTGCCTTACAGAAAATCTTGCATGTGGAACCAATT--------TTATAAAGTAGTGAGACCTGGATTTTTAAAATGATGCATACACTTTTACATTCCACACAC-TTCAGTGGGCTGTTCCTCACCTGCACTGTCCCAGCCAGAAACAGTGATGAGAGTCACCTTCCTCA i nomLeu3.chr3 C 0 M 1062 s rheMac3.chr4 168122676 502 + 169853907 CAAATTCCGGGCTGAGCACTCACCCTGTGAGCCCCCGGTGGAGCTGCCTTGTCCATGAAACACTTGCTGCTCCTGACAAGTGCCCCCCG--------------------------------------------TTTTT-GGGTGGCCTCAGCTCCCCGGGGGCCCGGCCACGTTGGAAGTGGAGCTTCAGTCTCACAGCTTCTGACTCCAATGTCTGCCTGCCGCATCCAGTCCAGCAAACACGGGGCATGGTCACCACCTGCCTGCC----CCACGCAGATGCCGGCCAGCCACCCGT-------------GCCAACCGCTCCTCCTGGAAGTGGAGCAGGAGGATGAGGGAGCTAAGCCTGGGCTCCAA-TCACTGGGTGTAAATGGGATATTTGCTGCCTTACAGAAAATCTTTCATGTGGAACCAATTTTATAGTGTGATAAAGTAGTGAGACCTGGATTTTAAAAATGACGCATGCACTTTTACATTCCATACTC-TTCAGTGGGCTGTTCCTCACCTGCACTGTCCTAGCCAGAAACAGTGATGAGAGTCAGCTTTCTCA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169077762 502 - 170955103 CAAATTCCGGGCTGAGCACTCACCCTGTGAGCCCCCGGTGGAGCTGCCTTGTCCATGAAACACTTGCTGCTCCTGACAAGTGCCCCCCG--------------------------------------------TTTTT-GGGTGGCCTCAGCTCCCCGGGGGCCCGGCCACGTTGGAAGCGGAGCTTCAGTCTCACAGCTTCTGACTCCAATGTCTGCCTGCCGCATCCAGTCCAGCAAACACGGGGCATGGTCACCACCTGCCTGCC----CCACGCAGATGCCGGCCAGCCACCCGT-------------GCCAACCGCTCCTCCTGGAAGTGGAGCAGGAGGATGAGGGAGCTAAGCCTGGGCTCCAA-TCACTGGGTGTAAATGGGATATTTGCTGCCTTACAGAAAATCTTTCATGTGGAACCAATTTTATAGTGTGATAAAGTAGTGAGACCTGGATTTTAAAAATGACGCATGCACTTTTACATTCCATACTC-TTCAGTGGGCTGTTCCTCACCTGCACTGTCCTAGCCAGAAACAGTGATGAGAGTCAGCTTTCTCA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163895450 545 + 165299245 CAAATTCCGGGCTGAGCACTCACCCTGTGAGCCCCTGGTGGAGCTGCCTTGTCCATGAAACACTTGCTGCTCCTGACAAGTGCCCCCCATTTCTGGGTGGCCTCAGCCCCCTGCTCCTGACAAGTGCCCCCCTTTTCT-GGGTGGCCTCAGCTCCCCGGGGGCCCGGCCACGTTGGAAGTGGAGCTTCAGTCTCACAGCTTCTGACCCCACTGTCTGCCTGCCGCATCCAGTCCAGCAAACACGGGGCGTGGTCACCACCTGCCTGCC----CCACGCAGATGCCGGCCAGCCACCCGC-------------ACCAACCGCTCCTCCTGGAAGTGGAGCAGGAGGATGAGGGAGCCAAGCCTGGGCTCCAA-TCACTGGGTGTAAATGGGATCTTTGCTGCCTTACAGAAAATCTTTCATGTGGAACCAATTTTATAGTGTTATAAAGTCGTGAGACCTGGATTTT-AAAATGACGCATGCACTTTTACATTCCATACTC-TTCAGTGGGCTGTTCCTCACCTGCACTGTCCTAGCCAGAAACAGTGATGAGAGTCAGCTTCCTCA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96682671 544 + 98384682 CAAATTCTGGGCTGAGCACTCACCCTGTGAGCCCCCGGTGGAGCTGCCTTGTCCATGAAACACTTGCTGCTCCTGACAAGTGAACCCAT-TTCTGGGTGGCCTCAGCCCACTGCTCCTGACAAGTGAACCCA-TTTCT-GGGTGGCCTCAGCTCCCCGGGGGCCCAGCCACATTGGAAGTGGAGCTTCAGTTTCACAGCTTCTGACCCCACTGTCTGCCTGCCGCATCCAGTCCAGCAAACACGGGGCATGGTCACCACCTGCCTGCC----CCAGGCAGATGCCGGCCAGCCACCCGC-------------GCCAACCGCTCCTCCTGGAAGTGGAGCGGGAGGATGAGGGAGCCAAGCCTGGGCTCCAG-TCACTGGGTGTAAATGGGATATTTGCTGCCTTACAGAAAATCTTTCATGTGGAACCAATTTTATAGTGTTATAAAGTAGTGAGACCTGGATTTTAAAAATGACGCATGCACTTTTACATTCCATACTC-TTCAGTGGGCTGTTCCTCACCTGCACTGTCCTAGCCAGAAACAGTGATGAGAGTCAGCTTCCTCA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169885723 506 + 171630274 CAAATTTCCAGCTGAGCTCTCACCCTGCAAACCCCAGGCGGAAACAGCATGTCCATGAAACACCTGCTTCTCCTGACAAATGCCCACCA--------------------------------------------TCTCCGGGGCAGACTCATCTCCCCCAGGGCCCGGCCACTTTGGAATCTGAGCTTCATTCTCACAGCTCCCGACCCTGCCATCAGCCTGCTGCAGCCAGTGAAGCAAGCACAAGGCACCATCAGCGCCTGCCTGCATACGCCATGCAGAGGCCGGCCAGCCGCCGGC-------------ACCAACCCCTCCTCCTGAAAGCGGAGCAGGAGGATGAGGGAGCCAAGCCTGGGCTCTAG-TCACTGGCTGCAAACGGGATATTTGCTCCCGTGCAGAAAATCTTGCATGTGGAACCAATTTTAGAGTGTTAC-GGGTGGTGAGGCCTGGAGTTTTAGAAGGATGCATGCACTTCCATGTTCCATACACTTTCAGAGGGCTGTTCCTCATCTGCACCGTCCTAGCCAGAAACAGTGGTGAGAGTCAGCTT-CTCA i calJac3.chr4 I 1105 C 0 e canFam3.chr1 56173082 6728 + 122678785 I a score=765190.000000 s hg38.chr6_KB021644v2_alt 105738 381 + 185823 TGTCTTAAC---------------------GCCTTTTAAAACTCCAGGTAGGGGCAATTCGAAAGATTAGATGCTTTGTTATCGAAATTGTCTTCCCAAACCTGGAAAGTGAAACCCAATGAGCATTGAGCAAATAGACCCT-GGAAGCCGCACACCTGCTCAGGAAAG--------------------------------CGgaggg-------------------------g---------------------------------------------------------------gagagagagagagagagaga--------------CCGCTTCTGTGGAGCAG------CCAACCCAGTTTTCTTATGGAGTCCCAGAGGATACACAGCCCCTCCCACGGCC-ATGCAGCCAGCCGGTGGGGAAGCAACAACCAGAACCCGGCTTTCTTGAGATCCGACCGGAGGCCCCCA-GGAGAACACCCAGCCAGTTGCTCCGTGCTGACCAGGCTGTGTTCCCGCTGTGGTCAGAGCAGCTCCGC s panTro4.chr6 170689757 385 + 172623881 TGTCTTAAC---------------------GCCTTTTAAAACTCCAGGTAGGGGCAATTCGAAAGATTAGATGCTTTGTTATCGAAATTGTCTTCCCAAACCTGGAAAGTGAAACCCAATGAGCATTGAGCAAATAGACCCT-GGAAGCCGCGCACCTGCTCAGGAAAG--------------------------------Cagagcg-------------------------g-----------------------------------------------------------gagagagagagagagagagagaga--------------TCGCTTCTGTGGAGCAG------CCAACCCAGTTTTCTTATGGAGTCCCAGAGGATACACAGCCCCTCCCGCGGCC-ATGCAGCCAGCCGGTGGGGAAGCAACAACCAGAACCCGGCTTTCTAGAGATCCGACCGGAGGCCCCCA-GGAGAACACCCAGCCAGTTGCTCCGTGCTGACCAGGCTGTGTTCCCGCTGTGGTCAGAGCAGCTCCAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172440475 375 + 174210431 TGTCTTAAC---------------------GCCTTTTAAAACTCCAGGTAGAGGCAATTCGAAAGATTAGATGCTTTGTTATCAAAATTGTCTTCCCAAACCTGGAAAGTGAAACCCAATGAGCATTGAGCAAAGAGACCCT-GAAAGCCGCTCACCTGCTCAGGAAAG--------------------------------CGGAGGG-------------------------G---------------------------------------------------------------------GAGAGAGAGAGAGA--------------CCGCTTCTGTGGAGCAG------CCAACCCAGTTTTCCTATGGAGTCCCAGAGGATACACAGCCCCTCCCACGGCC-ATGCAGCCAGCTGGTGGGGAAGCAACAACCAGAACCCGGCTTTCTTGAGATCCGACTGGAGGCCTCCG-GGAGAACACCCAGCCAGTTGCTCCGTGCTGACCAGGCTGTGTTCCCGGTGTGGTCAGAGCAGCTCCAT i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168123178 438 + 169853907 TGTCTTAACGCCTAAGGAATCTTATCTACAGCCTTTTAAAACTCCAGGTAGGGGCAATTCGAAAGATTATATGCTTTATTATCGAAATTGTCTTCCCGAACCTGGAAAGTGAAACCCAATGAGCATTGAGCAAAGAGATCCT-GGAAGCCGTGAACCTGCTCAGGAAAG--------------------------------CAAagagagagagagagagagagaaagaatgag-----------------------------------------------------------gagagagagagagagagagagaga--------------gCGCTTCAGTAGAACAGCCAACCCCAACCCAGTTTTCTCATGGATTCCCAGAGGATACACAGCCCCTCCCGCAGAC-ATGCAGCCAGCCGGTGGGGAAGCAACAATAAGAACCTGACTTCCTTGAGATCTGACCAGAGGCCTCCAGGGAGAACACCCAACCAGTTGCTCTGCGCTGACCAGGCTGTGTTCCCGGTGGGGTCCGAGCAGCTCCAT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169078264 457 - 170955103 TGTCTTAACGCCTAAGGAATCTTATCTACAGCCTTTTAAAACTCCAGGTAGGGGCAATTCGAAAGATTATATGCTTTATTATCGAAATTGTCTTCCCGAACCTGGAAAGTGAAACCCAATGAGCATTGAGCAAAGAGATCCT-GGAAGCCGTGCACCTGCTCAGGAAAG--------------------------------CAAagagagagagaaagagaaagaatgagagag----agagagagagagaga------------------------------------gagagagagagagagagagagagagagC--------------GCGCTTCAGTAGAACAGCCAACCCCAACCCAGTTTTCTCATGGATTCCCAGAGGATACACAGCCCCTCCCGCAGAC-ATGCAGCCAGCCGGTGGGGAAGCAACAATAAGAACCTGACTTCCTTGAGATCTGACCAGAGGCCTCCAGGGAGAACACCCAACCAGTTGCTCTGCGCTGACCAGGCTGTGTTCCTGGTGGGGTCCGAGCAGCTCCAT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163895995 460 + 165299245 TGTCTGAACGCCTAAGGAATCTTATCTACAGCCTTTTAAACCTCCAGGTAGGGGCAATTCAAAAGATTATATGCTTTGTTATCGAAATTGTCTTCCCGAACCTGGAAAGTGAAACCCAATGAGCATTGAGCAAAGAGATCCT-GGAAGCCGTGCACCTGCTcaggaaag--------------------------------cagagagagagagagagagagagacagagagagacagagagagacagagaga------------------------------------gagagagagacagagagagagagagaga--------------gcgcttcAGGAGAACAGCCAACCCCAACCCAGTTTTCTCATGGATTCCCAGAGGATACACAGCCCCTCCCGCAGAC-ATGCAGCCAGCCGGTGGGGAAGCAACAATAAGAACCTGACTTCCTTGAGATCTGACCGGAGGCCTCCA-GGAGAACACCCAGCCAGTTGCTCTGCGCTGACCAGGCTGTGTTCCCGGTGGGGTCCGAGCAGCTCCAT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96683215 437 + 98384682 TGTCTTAACGCCTAAGGAATCTTATCTACAGCCTTTTAAACCTCCAGGTAGGGGCAATTCAAAAGATTATATGCTTTGTTATCGAAATTGTCTTCCCGAACCTGGAAAGTGAAACCCAATGAGCATTGAGCAAAGAGATCCT-GGAAGCTGTGCACCTGCTCAGGAAAG--------------------------------CAAagagagagagagagagagacagacagaaag------------------------------------------------------------agagagagagagagagacagaga--------------gagCTTCAGTGGAACAGCCAACCCCAACCCAGTTTTCTCATGGATTCCCAGACGATACACAGCCCCTCCCGCAGAC-ATGCAGCCAGCCGGTGGGGAAGCAACAATAAGAACCTGACTTCCTTGAGATCTGACCGGAGGCCTCCAGGGAGAACACCCAGCCAGTTGCTCTGCGCTGACCAGGCTGTGTTCCCGGTGGGGTCCGACCAGCTCCAT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169886229 514 + 171630274 TGTCTTAACACCTAGGGAATGTCATCCACAGCCCTTCAAAGCTCCAGACGCCGGCAACTCAAAGGATTAGCTGCTTCCTTGTCGAAATTGTCTTCCCAAACCTGGAAAGTGAAACCCAATGAGCACTGAGCAAAGTGGTCCTGGGAAGCCGTGCACCTGCTCAGGAAAGGacacacacacacacacacacacacacacacacagagagagagagagacatagagacacaaagtgacacagagcatcagagagagacatagagacatacagagagacagagacacagagagacagagagacacagaaagagagagagagTAAGGAAGTGCGCGCGCTTCTGCAGAGCAG------CCAACC--GTTTTCTCCTGGAGCCCCAGAGGATTCACAGCACCTCCCACGGGCTACACAG-CAGCCTTCCAGGAGGCAGCGACCAGAACCCGGCTTTCT--------------------CCAGGGACAACACCC-GCCAGCTGCTCCATGCGGGCT-GACTGTGCTCCCGGTGTGGCTGGAGCAGCTCCAG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56173082 6728 + 122678785 I e nomLeu3.chr3 156303499 1062 + 157873769 M a score=117755.000000 s hg38.chr6_KB021644v2_alt 106119 40 + 185823 CCAGCACAGCTTTCCGCTTCCCTTTGCAGGGACAGAGCAC s panTro4.chr6 170690142 40 + 172623881 CCAGCACAGCTTTCCGCTTCCCTTTGCAGGGACAGAGCAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172440850 40 + 174210431 CCAGCACAGCTTTCTGCTTCCCTTTGCAGGGACAGAACAC i ponAbe2.chr6 C 0 I 7077 s nomLeu3.chr3 156304562 40 + 157873769 CCAGCACAGCTTTCTGCTTCCCTTTGCAGGGACAGAGCAC i nomLeu3.chr3 M 1062 C 0 s rheMac3.chr4 168123616 40 + 169853907 CCAGCACAGCTTTCCGCTTCCGTTTGCAGGGACAGAGCAC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169078721 40 - 170955103 CCAGCACAGCTTTCCGCTTCCGTTTGCAGGGACAGAGCAC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163896455 40 + 165299245 CCAGCACAGCTTTCCGCTTCCGTTTGCAGGGACAGAGCAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96683652 40 + 98384682 CCAGCACAGCTTTCCGCTTCCCTTTGCAGGGACAGAGCAC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169886743 39 + 171630274 GGGGCACAGCTTTCCACGTCCCTCTGCAGGGACAGAGCC- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56173082 6728 + 122678785 I a score=741745.000000 s hg38.chr6_KB021644v2_alt 106159 301 + 185823 CTGAGTTGCAGGTGCTTAAGCGAGCAGCCGATTACTTTTTCTTGTAAGAACAGGCGTGGATGCATTTCCACATGGCTGTCCTC--CCCACGTCTCTGTGGACTTACAATGCACGGCTGTCATGTTTACTTTCAGCTCATGGGGCACGTTCCACACCGTCATCATACTTGGTTATTTCCATTTGATTATGGAATGTTGTACCAGAGCAATGTTGTACTAAAGTTTTTAAGTGAAGTACTGAGCGGGCAATTCTCCAATAGAAGGAAAATATCCACACTAAGAAGAGAGAGAAAATCTACAGGGA s panTro4.chr6 170690182 301 + 172623881 CTGAGTTGCAGGTGCTTAAGTGAGCAGCCGACTATGTGTTCTTGTAAGAACAGGCATGGATGCATTTCTACATGGCTGTCCTC--CCCACATCTCTGTGGACTTACAATGCACGGCTGTCATGTTTACTTTCAGCTCGTGGGGCACGTTCCACACCGTCATCATACTCGGTTATTTCCATTTGATTATGGAATGTTGTACCAGAGCAATGTTGTACTAAAGTTTTTAAGTGAAGTACTGAGCGGGCAATTCTCCAATAGAAGGAAAATATCCACACTAAGAAGAGAGAGAAAATCTACAGGGA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172447967 301 + 174210431 CTGAGTTGCAGGTGCTTAAGTGAGCAGCCGACTACTTGTTCTTGTAAGAACAGGCATCGATGCATTTCTACATGGCTGTCCTC--CCCACATCTCTCTGGGCTTACAATGCACGGCTATCATGTTTACTTTCAGCTCGTGGGGCACGTTCCACACCGTCATCATACTCGGTTATTTCCATTTGATTATGGAATGTTGTACCAGAGCAATGTTGTACTAAAGTTTTTAAGTGAAGCACTGAGCGGGCAATTCTCCAATAGAAGGAAGATATCCACACTAAGAAGAGAGAAAAAATCTACAGGGA i ponAbe2.chr6 I 7077 C 0 s nomLeu3.chr3 156304602 301 + 157873769 CTGAGCTGCAGGTGCTTAAGTGAGCAGCTGACTACTTGTTCTTCTAAGAACAGGCATCGATGCGTTTCTACATGGCTGTCCTC--CCCATGTGTCTGTGGGCTTACAATGCACGGCTATCATGTTTACTTTCAGCTCGTGGGGCACGTTCCACACCATCATCATACTCGGTTATTTCCATTTGATTATGGAATGTTGTCCCAGAGCAATGTTGTACTAAAGTTTTTAAGTGAAGCACTGAGCGGGCAATTCTCCAACAGAAGGAAAATATCCGCACGAAGAAGAGAGAGAAAATCTACAGGGA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168123656 283 + 169853907 CTGAGCTGCAGGTGCTTaagtgagcagccgactacgtgttcttgtaagaacaggcatcgatgtatttctgcatggctGTCCTC--CCCACGTCTC--TTGGCTTACCACGCACAGCTATCATGTTTACTTTCAGCTCCTGGGGCACGTTCCTCACCGTCATCATACTCAGTTATTTCCATTTGATTATGGAATGTTGTACC----------------AAAGTTTTTAAGTGAAGCACTGAGCGGAAAATTCTCCAAGAGAAGGAAAATATCCACACTAAGAAGAGAGAGAAAATCTACAGGGA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169078761 285 - 170955103 CTGAGCTGCAGGTGCTTAAGTGAGCAGCCGACTACGTGTTCTTGTAAGAACAGGCATCGATGTAGTTCTGCATGGCTGTCCTC--CTCACATCTCTGTGGGCTTACCATGCACAGCTATCATGTTTACTTTCAGCTCCTGGGGCACGTTCCTCACCATCATCATACTCAGTTATTTCCATTTGATTATGGAATGTTGTACC----------------AAAGTTTTTAAGTGAAGCACTGAGTGGGCAATTCTCCAAGAGAAGGAAAATATCCACACTAAGAAGAGAGAGAAAATCTACAGGGA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163896495 285 + 165299245 CTGAGCTGCAGGTGCTTAAGTGAGCAGCCGACTACGTGTTCTTGCAAGAACAGGCATCGATGTATTTCTGCATGGCTGTCCTC--CCCACGTCTCTGTGGGCTTACCATGCACAGCTATCATGTTTACTTTCAGCTCCCGGGGCATGTTCCTCACCGTCATCATACTCAGTTATTTCCATTTGATTATGGAATGTTGTACC----------------AAAGTTTTTAAGTGAAGCACTGAGCAGGCAATTctccaagaaaaggaaaatatccatactaagaagagagagaaaatctacAGGGA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96683692 285 + 98384682 CTGAGCTGCAGGCGCTTAAGTGAGCAGCCGACTACGTGCTCTGGCAAGAACAGGCATCGATGTATTTCTGCATGGCTGTCCTC--CCCACGTCTCTGTGGGCTTACAATGCACAACTATCATGTTTACTTTCAGCTCCTGGGGCACGTTCCTCACCATCATCATACTCGGATATTTCCATTTGATTATGGAATGTTGTACC----------------AAAGTTTTTAAGTGAAGCACTGAGCAGGCAATTCTCCAATAGAAGGAAAATATCCATACTAAGAAGAGAGAGAAAATCTACAGGCA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169886782 262 + 171630274 -------------------CTGAGCAGCCT-CTCCAGGCTCCTGTGAGCGCGGGCCT-GACGGGGTTCTGCATTGCCGTCCGCCGCCCACGTAGCTGTGGAATGACCATGCACAGCTATGGCATTTACCTTCAGCTAATAGGGTGCGCTCA-----------------GGTTACATCCATTTCATTATGGAATGTCGGAGCACAGCACTGCCCTGCCGAGGTGTTTAACTAAAGCACTGAGGGGGCAATTCTCTAATAGAAAGAA-ATGCCCACACTGAGAAGAGAG--GAAATCCACAGGGA i calJac3.chr4 C 0 I 1333 e canFam3.chr1 56173082 6728 + 122678785 I a score=128242.000000 s hg38.chr6_KB021644v2_alt 106460 64 + 185823 CATTGAAGTGGTTGAGACCTCAAAATGG--TTTTAACTTTCTTAAAAGCCCATCTGAGACAAGAAA s panTro4.chr6 170690483 64 + 172623881 CATTGAAGTGGTTGAGACCTAAAAATGG--TTTTAACTTTCTTAAAAGCCCATCTGAGACAAGAAA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172448268 64 + 174210431 CATTGAAGTGGTTGAGACCTCAAAATGG--TTTTAACTTTCTTAAAAGCCCATCTGAGACAAGAAA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156304903 64 + 157873769 CGTTGAAGTGGTTGAGACCTCAAAATGG--TTTTAACTTTCTTAAAAGCCCATCTGAAACAAGAAA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168123939 66 + 169853907 CAGGGAAGTGGTTGCGACCTCAACATAGTTTTTTAACTTTCTTGAAAGCCCATCTGAAACAAGAAA i rheMac3.chr4 C 0 I 24 s macFas5.chr4 169079046 63 - 170955103 CAGGGAAGTGGTTGCGACCTCAACATAG--CTTTAACTTTCTTGAAAGCCCATCTGAAACAAGAA- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163896780 64 + 165299245 CAGTGAAGTGGTTGAGACCTCAACATGG--TTTTAACTTTCTTGAAAGCCCATCTGaaacaagaaa i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96683977 51 + 98384682 CAGTGAAGTGGTTGAGACCTCAACATGG--TTTTAACTT-------------TCTGAAACAAGAAA i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169887044 1333 + 171630274 I e canFam3.chr1 56173082 6728 + 122678785 I a score=49730.000000 s hg38.chr6_KB021644v2_alt 106524 28 + 185823 ACATTTCTAAGCACTTAAGATGTAATGA s panTro4.chr6 170690547 28 + 172623881 ACATTTCTAAGCACTTAAGATGTAATGA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172448332 28 + 174210431 ACATTTCTAAGCACTTAAGATGTAAGGA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156304967 28 + 157873769 CCATTTCTAAGCACTTAAGATGTAATGA i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169079109 28 - 170955103 ACATTTCTAAGCACTTAAGATGTAAAGA i macFas5.chr4 C 0 M 144 s papAnu2.chr4 163896844 28 + 165299245 acatttctaagcACTAAAGATGTAAAGA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96684028 28 + 98384682 ACATTTCTAAGCACTTAAGATGTAATGA i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169887044 1333 + 171630274 I e canFam3.chr1 56173082 6728 + 122678785 I e rheMac3.chr4 168124005 24 + 169853907 I a score=10554.000000 s hg38.chr6_KB021644v2_alt 106552 10 + 185823 GCAGGGCGTT s panTro4.chr6 170690575 10 + 172623881 GCAGGGCGTT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172448360 10 + 174210431 GCAGGGCGTT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156304995 10 + 157873769 GCAGGGCGTT i nomLeu3.chr3 C 0 C 0 s papAnu2.chr4 163896872 10 + 165299245 GCAGGGGGGT i papAnu2.chr4 C 0 I 1 s chlSab2.chr13 96684056 10 + 98384682 GCGGGGGGGT i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169887044 1333 + 171630274 I e canFam3.chr1 56173082 6728 + 122678785 I e rheMac3.chr4 168124005 24 + 169853907 I e macFas5.chr4 169079137 144 - 170955103 M a score=1911.000000 s hg38.chr6_KB021644v2_alt 106562 1 + 185823 T s panTro4.chr6 170690585 1 + 172623881 T i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172448370 1 + 174210431 T i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156305005 1 + 157873769 T i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169079283 1 - 170955103 T i macFas5.chr4 M 144 C 0 s papAnu2.chr4 163896883 1 + 165299245 T i papAnu2.chr4 I 1 C 0 s chlSab2.chr13 96684066 1 + 98384682 T i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169887044 1333 + 171630274 I e canFam3.chr1 56173082 6728 + 122678785 I e rheMac3.chr4 168124005 24 + 169853907 I a score=537525.000000 s hg38.chr6_KB021644v2_alt 106563 221 + 185823 GTAATTTGTTACACTTATTTTCTAAGTTTAACAAAGTGACTAAATATTGTCTATGTCTTTCTAATTTCCATAAAATAAC--TGTTATGAAATGGAAATATGTTCTTTTAAAAAAACATCCGAATGTTCGATCCATTTCCCTCACTAATGTGGGGTTGACAGCCGAGTGGTTGGGCGAGGTGTGCCCTGCAAACTAAGGTGGATGGAGACATTCAG--Caacattt s panTro4.chr6 170690586 223 + 172623881 GTAATTTGTTACACTTATTTTCTAAGTTTAACAAAGTGACTAAATATTGTCTATGTCTTTCTAATTTCCATAAAATAAC--TGTTATGAAATGGAAATATGTTCTTTTAAAAAAACATCTGAATGTTCGATCCGTTTCCCTCACTAATGTGGGGTTGACAGCCGAGTGGCTGGGTGAGGTGTGCCCTGCAAACTAAGGTGGATGGagacattcagaacaacattt i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172448371 225 + 174210431 GTAATTTGTTACACTTATTTTCTAATTTTAACAAAGTGACTAAATATTGTCTATGTCTTTCTAATTTCCATAAAATAACTATGTTATGAAATGGAAATATGTTCTTTTAAAAAAACATCTGAATGTTCGATCCGGTTCCCTCACTAATGTGGGGTTGAGAGCCGAGTGGCTGGGCGAGGTGTGCCCTGCAAACTAAGGTGGATGGagacattcagaacaacattt i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156305006 223 + 157873769 GTAATTTGTTACACTTATTTTCTAATTTTAACAAAGTGACTAAATATTGTCTATGTCTTTCTAATTTCCATAAAATAAC--TGTTATGAAATGGAAATATGTTCTTTTAAAAAAACATCTGAATGTTCGATCCGTTTCCCTCACTAATGTGGGGTTGAGAGCCGAGTGGCTGGGCGAGGTGTGCCCTGCAAACTAaggtgggtggagacattcagaacaacattt i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168124029 225 + 169853907 GTAATTTGTTACACTTATTTTCTAATTTTAACAAAGTGGCTAACTATTGTCTATGTCTTTCTAATTTCCATAAAATAACTATGTTATGAAATGGAAATATGTTTTTTTAAAAAATCATCTGACTGTTCCACCCGTTTCCCTCACTGATGTGGGGTTGAGAGCCGAGTGGCTGGACGAGGTGTGCCCTGCAAACTAAGGTGGATGGagacattcagaacaacatgt i rheMac3.chr4 I 24 C 0 s macFas5.chr4 169079284 225 - 170955103 GTAATTTGTTACACTTATTTTCTAATTTTAACAAAGTGGCTAAATATTGTCTATGTCTTTCTAATTTCCATAAAATAACTATGTTATGAAATGGAAATATGTTTTTTTAAAAAATCATCTGACTGTTCCATCCGTTTCCCTCACTGACGTGGGGTTGAGAGCCGAGTGGCTGGGCGAGGTGTGCCCTGCAAACTAaggtgggtggagacattcagaacaacatgt i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163896884 225 + 165299245 GTAATTTGTTAcacttattttctaattttaacaaAGTGGCTAAATATTGTCTATGTCTTTCTAATTTCCATAAAATAACTATGTTATGAAatggaaatatgttttttaaaaaaatcatctgtcTGTTCGATCCGTTTCCCTCACTGATGTGGGGTTGAGAGCCGAGTGGCTGGGCGAGGTGTGCCGTGCAAACTAAGGTGGGTGGAGACATTCAGAACAACATGT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96684067 225 + 98384682 GTAATTTGTTATACTTATTTTCTAATTTTAACAAAGTGGCTAAATATTGTCTATGTCTTTCTAATTTCCACAAAATAACTATGTTATGAAATGGAAATATGTTTTTTTAAAAAATCATCTGACTGTTCGATCCGTTTCCCTCACTGATGTGGGGTTGAGAGCCGAGTGGCTGGGCGAGGTGTGCCCTGCAAACTAaggtgggtggagacattcagaacaacatgt i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169887044 1333 + 171630274 I e canFam3.chr1 56173082 6728 + 122678785 I a score=2174937.000000 s hg38.chr6_KB021644v2_alt 106784 792 + 185823 aggaattttgccagaatttgacaatcggttgaatgtggtacatttaaaataggcttctattttgtagtattttaatttttgttacctttgatttttctcatattttatttttattgtattttacggaagtattgc----tgtgtcggattCTATGTTTACATCGATAGAGTGTAAAGTTATACATCTTAATGTATGTTAATGTATGTAGGCGCCTCTAGAGTTCCTCCGAGATGCAGCCGCAGAGACCTCATCAGTCCATGCCCTTAACTCCGTCCGCCTTCTCTGAACTCCTTGGGAATGCATCGGTCGTGAGATCAGCCTGGGCTCTGCTGAGAGAGGCCCACAGTATCGGGCCTCTCAGTGAATCTTCCACCACGATTCGATGGGACCCAGGGTTTTTCAACACCGCAACACAGAAGGCTACctggctggaggggtgagtgggcccttgggcaggtcttttaaactatgtagacctcagtttcctcatttgaaaaataaaggaatgggatttaaaatgtttccctctcagctctaaaacatctatgattcaagt-----aagattctgagcaaggtattatt-atCAGAGGGAAGTTGAGTTTCTTACCAACCTTGTGCTGAGCGGGAAGGA----CCTCCGTGTCCAGCGCCCCGTAGGTCCGACGCCTG-T---------GCGTGGCTGATCGCTTCACGCC-CCCATCCTTT-GGTTCTTGTAGCAAATAAAGGGGCTTGAACTAGAAATCTGCTGCAATTACTTCTGAGTCTTGGGAGGTTTTGAAATTTTTAATGAGAAAAATGTGAGCA- s panTro4.chr6 170690809 792 + 172623881 aggaattttgccagaatttgacaatcggttgaatgtggtacatttaaaataggcttctattttgtagtattttaatttttgttacctttgatttttctcatattttatttttattgtattttacggaagtattgc----tgtgttggattCTATGTTTACATCGATAGAGTGTAAATTTATACATGTTAGTGTATGTTAATGTATGTAGGCGCCTCTAGAGTTCCTCTGAGATGCAGCCGCAGAGACCTCATCAGTCCATGCCCTTAACTCCGTCCGCCTTCTCTGAACTCCTTGGGAATGCATCAGTCATGAGATCAGCCTGGGCTCTGCTGAGAGAGGCCCACAGTATCGGGCCTCTCAGTGAATCTTCCACCACGATTCGATGGGACCCAGGGTTTTTCAGCACCGCAACACAGAAGGCTACCTGGCTGGAGGGGTGAgtgggcccttgggcaggtcttttaaactatgtagacctcagtttcctcatttgaaaaataaaggaatgggatttaaaatgtttccctctcagctctaaaacttctatgattcaagt-----aagattcTGAGCAAGGTATTATT-ATCAGAGGGAAGTTGAGTTTCTTACCAACCTTGTGCTGAGCGGGAAGGA----CCTCCGTGTCCAGCGCCCCATAGGTCCGACGCCTG-T---------GCGTGGCTGATCGCTTCATGCC-CCCATCCTTT-GGTTCTTGTAGCAAATAAAGGGGCTTGAACTAGAAATCTGCTGCAATTACTTCTGAGTCTTGGGAGGTTTTGAAATTTTTAATGAGAAAAATGTGAGCA- i panTro4.chr6 C 0 M 368 s ponAbe2.chr6 172448596 782 + 174210431 aggaattttgccagaatttgacaatcggttgaatgtggtacatttaaaataggcttctattttgtagtattttaatttttgttacctttgatttttctcatattttaattttattgtattttacggaagtattgc----tgtgtcagattCTATGTTTACATCGATAGAGTGTAAATTTATAC----------ATGTTAATGTATGTAGGCGCCTCTAGAGTTCCTCCGAGATGCAGCCGCGGAGACCTCATCAGTCCATGCCCTTAACTCCATCTGCCTTCTCTGAACTCCTTGGGAATGCATTGGTCGTGAGATCAGCCTGGGCTCTGCTGAGACAGGCCCACAGTGTCGGGCCTCTCGGTGAATCTTCCATCAGGATTCGATGGGACCCAGGGTTTTTCAACACCGCAACACAGAAGGCTACCTGGCTGTAGGGGTGAgtgggcccttgggcaggtcttttaaactatgtagacctcagtttcctcatttgaaaaataaaggaatgggatttaaaatgtttccctctcagctctaaaacatctatgattcaagt-----aagattcTGAGCAAGGTATTATT-ATCAGAGGGAAGTTGAGTTTCTTACCAACCTTGTGCTGAGCGGGAAGGA----CCTCCGTGTCCAGCGCCCCGTAGGTCCGACGCCTG-T---------GCGTGGCTGATCGCTTCATGCC-CCCGTCCTTT-TGTTCTTGTAGCAAATAAAGGGGCTTGAACTAGAAATCTGCTGCAATTACTTCTGAGTCTTGGGAGGTTCTGAAATTTTTAATGAGAAAAATGTGAGCA- i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156305229 782 + 157873769 aggaattttgccagaatttgacaatcggttgaatgtggtacgtttaaaatgggcttctattttgtagtattttaatttttgtcacctttgatttttctcgtattttaattttactgtattttacggaagtattgc----tgtgtcggattCTATGTTGACATCGATAGAGTGTAAATTTATCC----------ATGTTAATGTATGTAGGCGCCTCTACAGTTCCTCTGAGATGCAGCCGCGGAGACCTCATCCGTCCATGCCCTTAACTCCCTCCGCCTTCTCTGAACTCCTTGGGAATGCATCGGTGGAGAGATCAGCCTGGGCTCTGCGGAGAGAGGCCCACAGTATCAGGCCTCTCGGTGAATCTTCCACCACGATTCGATGGGAGCCAGGGTTTTTCAACACCGCGACACAGAAGGCTACCTGGCTGGAGGGGTGAgtgggcccttaggcaggtcttttaaactatgtagaactcagtttcctcatttgaaaaataaaggaatgggatttaaaatgtttccctctcagctctgaaacgtctatgattcaagt-----aagattcTGAGCAAGGTATTATT-ATCAGAGGGAAGTTGAGTTTCTTACCAACCTTGTGCTGAGCGGGAAGGA----CCTCCGTGTCCAGCGCCCCGCAGGTCTGACGCCTG-T---------GCGTGGCTGATGGCTTCGTGTC-CCCGTCCTTT-GGTCCTTGTAGCAAATAAAGGGGCTTGAACTAGAAATCTGCTGCCATTACTTCTGAGTCTTGGGAGGTTTTGAAATTTTTAATGAGAAAAATGTGAGCA- i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168124254 786 + 169853907 aggaattttgccagaatttgacaatc-atcgaatgtggtacatttaaaatgggcttctattctgtagcattttaatttttgtgacctttgatttttctcacattttaattttattgtattttacggaagtattgc----tgtgacggattCTATGTTTGCATCAATACAGTGTAAATTTATAC----------ATATTAATGTAGGTACGCGCCTCTAGAGTTCCTCTGAGACGCAGCCGTGGAGACCTCATCAGTCCATGCCCTTAACTCCGGCTGCCTTTTCTGAACTGCTTGGGAATGCATCGGTCGTGAGATCAGCCTGGGCTCTGCTGAGAGAGGCCCACAGTATCAGGCCTCTCAGTGAGTCTTCCACCATGATTCGATGGGACCCAGGGTTTTTCAACACCGCAACACAGCAGGCTACCTGGCTGGAGGGGTGAgtggacccttgggcaggtcttttaaactgtgtaggcctcagtttcctcgtttgaaaaat-aaggaatgggatttaaaacgtttccctctcagctctaaaacatctatgattcaagt-----aagattcCGAGCAAGGTATTATT-ATCAGAGGGAAGTTGGGTTTCTTACCAACCTTGTGCTGAGCGGGAAGGACAGGCCTCCATGTCCAGCACCCCGTAGATCCAACGCCTGCC---------GCGTGGCTGTTCGCTTCATGCC-CCTGTCCTTTGGGTTCTTCTAGCAAATAAAGGGGCTTGAACTAGAAATCTGCTACAATTACTTCTGAGTCTTGGGAGGTTTTGAAATTTTTAATGAGAAAAACGTGAGCA- i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169079509 786 - 170955103 aggaattttgccagaatttgacaatc-atcgaatgtggtacatttaaaatgggcttctattctgtagtattttaatttttgtgacctttgatttttctcacattttaattttattgtattttacggaagtattgc----tgtgacggattCTATGTTTGCATCAATACAGTGTAAATTTATAC----------ATATTAATGTAGGTACGCGCCTCTAGAGTTCCTCTGAGACGCAGCCGTGGAGACCTCATCAGTCCATGCCCTTAACTCCGGCTGCCTTTTCTGAACTGCTTGGGAATGCATCGGTCGTGAGATCAGCCTGGGCTCTGCTGAGAGAGGCCCACAGTATCAGGCCTCTCAGTGAGTCTTCCACCATGATTCGATGGGACCCAGGGTTTTTCAACACCGCAACACAGCAGGCTACctggctggaggggtgagtggacccttgggcaggtcttttaaactgtgtaggcctcagtttcctcgtttgaaaaat-aaggaatgggatttaaaacgtttccctctcagctctaaaacatctatgattcaagt-----aagattccgagcaaggtattatt-atCAGAGGGAAGTTGGGTTTCTTACCAACCTTGTGCTGAGCGGGAAGGACAGGCCTCCATGTCCAGCACCCCGTAGATCCAACGCCTGCC---------GCGTGGCTGTTCGCTTCATGCC-CCTGTCCTTTGGGTTCTTCTAGCAAATAAAGGGGCTTGAACTAGAAATCTGCTACAATTACTTCTGAGTCTTGGGAGGTTTTGAAATTTTTAATGAGAAAAACGTGAGCA- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163897109 784 + 165299245 AGGAATTTTGCCAGAATTTGACAATC-ATCGAATGTGGTACATTTAAAATGGGCTTCTATTctgtagtattttaatttttgtaacctttggtttttctcacattttaattttattgtattttacggAAGTATTGC----TGTGACGGATTCTATGTTTACATCAATACAGTGTAAATTTATAC----------ATGTTAATGTAGGTAGGCGTCTCTAGAGTTCCTCTGAGATGCAGCCGTGGAGACCTCATCAGTCCATGCCCTTAACTCCGGCTGCCTTTTCTGAACTGCTTGGGAATGCATTGGTggtgagatcagcctgggctcTGCTGAGAGAGGCCCACAGTCTCAGGCCTCTCGGTgagtcttccaccatgattagaTGGGACCCAGGGTTTTTCAACACTGCAACACAGCAGGCTACCTGGCTGGAGGGGTGAGTGGACCCTTGGGCAGGTTCTTTAAACTGtgtaggcctcagtttccttgtttgaaAAAT-AAGGAATGGGATTTAAAATGTTTCCCTCTCAGCTCTAAAACATCTATGATTCAAGT-----AAGATTCCGAGCAAGGTATT-TT-ATCAGAGGGAAGTTGGGTTTCTTACCAACCTTGTGCTGAGCGGGAAGGACAGGCCTCCATGTCCAGCGCCCCGTAGATCCAGTGCCTG-C---------ACGTGGCTGTTCGCTTCATGCC-CCCGTCCTTTGGGTTCTTCTAGCAAATAAAGGGGCTTGAACTAGAAATCTGCTACAATTACTTCTGAGTCTTGGGaggttttgaaatttttaatgagaaaaatgtgagca- i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96684292 784 + 98384682 aggaattttgccagaatttgacaatc-gtcaaatgtggtacatttaaaatgggcttctattttgtagtattttaatttttgttacctttgatttttctcacattttaatgttattgtattttacagaagtattgc----ggtgacagattCTATGTTTACATCAATACAGTGTAAATCTATAC----------ATGTTAATGTAGGCAGGCGCCTCTAGAGTTCCTCTGAGATGCAGCCGTGGGGACCTCATCAGTCCATGCCCTTAACTCCGTCTGCCTTTTCTGAACTGCTTGGGAATGCATCGGTCGTGAGATCAGCCTGGGCTCTGCTGAGAGAGGCCCACAGTATCAGGCCTCTCGGTGAGTCTCCCACCATGATTCGAT-GGACCCAGGGTTTTTCAACATCGCAACACAGCAGGCTACctggctggaggggtgagtggacccttgggcaggtcttttaaactgtgtaggcctcagtttcctcgtttgaaaaat-aaggaatgggatttaaaatgtttccctctcagctctaaaacatctatgattcaagt-----aagattcCGAGCAAGGTATTATC-ATCAGAGGGACGTTGGGTTTCTTACCAACCTTGTGCTGAGCGGGAAGGACAGGCCTCTGTGTCCAGCGCCCCGTAGATCCAACGCCTG-C---------GCGTGGCTGTTCGCTTCATGCC-CCCGTCCTTTGGGTTCTTCTAGGAAATAAAGGGGCTTGAACTAGAAATCTGCTACAATTACTTCTGAGTCTTGGGAGGTTTTGAAATTTTTAATGAGAAAAATGTGAGCT- i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169888377 779 + 171630274 AGGAATTTTGCCAGAATTTGACAATC---AGAATTTGGTAAATTTAAAATGGGCttgtattttgtagtattttaatttttgttaccttttatttttctcatattttaattttattgtattttGGtaaaatataataaaatttaaaatattatatGTTTACATTGATATAGTGTCAATTTATAT----------ACACAAATGTATGTAGGCCCCTCTAGACATCCTCTGAGATGCAG-GGCTGAGAACTCGTCAGTCTCTGCTCCTAACTCAGTCCTCCTATTCTGAACTCCTTGAGAA--------TCGTGAAATCAGCCTGGGCTCTGCTGACTGAGG-CCACAGCATCCTGCCTCTCAGTGAATCGTCCCCCAGGATTCTGTGGGACCTGGGGTTTCTCAACAGCACAGAAAAGCAGGCTACCTGGTTGGAGGGCTGAGCGGGCccctgggcaggtctggtaaacaatgtaggcctcagtttcctcatttgaaaaataaaggaatggaatttaaaatgtttccctcttagctttaaaacttcta-gattcaagtcagacaagattgtgaGTGAGGCATTATTGATCAGAGGAAAGCTGAGTTTCTCGGCAAC--TGTGCAGACAGG-----------CCCTGTTTCCAGGGTCCTGTAAACCTGACCCCCG-TAGACCCCAAGCCTGCACAATCACTTCATGCCTTCCATCCTTTGGGTTTTTCTAGAAAATGAACGGGCTTG-ACTAGAAATCAGCTAC-ATTACTTCTGAGTCTTGGGACGTTTTGAAGTTTTTAATGAAAACAACGTGCGTGA i calJac3.chr4 I 1333 C 0 e canFam3.chr1 56173082 6728 + 122678785 I a score=229858.000000 s hg38.chr6_KB021644v2_alt 107576 110 + 185823 GAAGAGAAATGAAATCCCTCTCCCTGTGAGCTTGGCGTCCCCTGCCTCGCTGCTGGCCAGCGCTGCCCTGGTGACAGAACCCCGAGCTGGCGGCCGGCCGCTGGCATCAG s ponAbe2.chr6 172449378 109 + 174210431 GAAGAGAAATGAAATCC-TCTCCCTGTGAGCTTGGCGTCCCCTGCCTCGCTGCTGGCCAGCGCTGCCCTGGTGACAGAACCCCTTGCTGGCAGCCGGCCGCTGGCGTCAG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156306011 110 + 157873769 GAAGAGAAATGAAATCCCTCTCCCTGTGAGCTCGGCGTCCCCTGCCTCGCTGCTGGCCAGCGCTGCCCTGGTGACAGAACCCCGAGCTGGCGGCCGGCCACTGGCGTCAG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168125040 105 + 169853907 GAAGAGAAATGAAAGCTGTCTCCCTGTGAACGCGGCGTCCCCTGCCTCGCTGCTGGCCAGCGCTGCCCTGGTGACAGAACCCA-----AGCCGGCGGCCGCTGGCGTCAG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169080295 105 - 170955103 GAAGAGAAATGAAAGCCCTCTCCCTGTGAACGCGGCGTCCCCTGCCTCGCTGCTGGCCAGCGCTGCCCTGGTGACAGAACCCA-----AGCCGGCGGCCGCTGGCGTCAG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163897893 105 + 165299245 gaagagaaatgaaagcccTCTCCCTGTGAACGCGGCGTCCCCTGCCTCGCTGCTGGCCAGCGCTGCCCTGGTGACAGAACCCC-----AGCCGGCGGCCGCTGGCGTCAG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96685076 105 + 98384682 GAAGAGAAATGAAAGCCCTTTCCCTGTGAACGCGGCGTCCCCTGCCTCGCTGCTGGCCAGCGCTGCCCTGGTGACAGAACCTC-----AGCCGGCGGCCGCTGGCGTCAG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169889156 108 + 171630274 GCAGAGAAATGAAATCC-CCTCCCCATGAGTATGGCATCCCCTGCCTCGCTGCTGGCCAGGGCTGCCCTGGTGACAGAACCCTGAGCTGGC-GGTGGCTGCTGGCGTCGG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56173082 6728 + 122678785 I e panTro4.chr6 170691601 368 + 172623881 M a score=2148755.000000 s hg38.chr6_KB021644v2_alt 107686 761 + 185823 GTTGCAGTGAGTCGCAGCCTACGTGAA----TGGGTTTGACATGAAAGGGCCTCGGGTATGGGGCATTGCCAACTCCTGATTGTGCCCACGGGGAGGACCCCATAGTCGTCGCCAAGAAGTGGTGGTCGCCACTCTTCCCAGGGGCGAGGAAAAATGAATGGCCCAGTGCAGGCCCACACGCAGGGATGGCACAGCCGGCTTGTGAGGGGCAGAGGCTGGAGCAATGGGG-AGGGGCTGTTTCGAGGAATGGAGATAATGAGCGTCTTCGGAAACCCTTCTGTTTAATTCACTCTTGAT----------------------TGATTGTTAAGAAAAAGAGAAAAGATTCCATTGCCTACAGCGAAGAGTCAATCTCACGGATACATCGGAGCCCCCGGTTAATCCGCTTCATCTTTCATCTGTGCTGCAGTCGTGGATTTTAATGAGTTGCAGGCGACCCATTCAGACGTAATGGTGTGGAGGTCAACGTGGGTCAAGTTTAAGAAGGGGGGG-CTCAGGGGTAGAAGGAAGAAACGGGGACGCTTGTCATGATCACAGCCGGGAGGAGAAATGGATCCGCTGGGCTTGgagaaagagggaaggagagacagagagtgggagacagaggggagagagGGCACTATCTGCCCCACCTTGTCTGGATGG-CGCCACCCAGGGCGGAGAGAGGTCGCACTTCTTTAACACTGAGACGGCCAGGATTTTGAGGGACAGCTCTGAACCGGCTGATTTGTAGGGAACTAGAATTGTTATTCTTGTGTTTTTTGCTA s panTro4.chr6 170691969 763 + 172623881 GTTGCAGTGAGTCGCAGCCTACGTGAA--GTTTGGGTTGACATGAAAGGGCCTCGGGTAGGGGGCATTGCCAACTCTTGATTGTGCCCACTGGGAGGACCCCATAGTTGTCGCCAAGAAGTGGTGGTCGCCACTCTTCCCAGGGGCGAGGAAAAATGAATGGCCCAGTGCAGGCCCACACGCAGGGATGGCACAGCCGGCTTGTGAGGGGCAGAGGCTGGAGCAATGGGG-AGGGGCTCTTTCGAGGAATGGAGATAATGAGCGTCTTCGGAAACCCTTCTGTTTAATTCACTCTTGAT----------------------TGATTGTTAAGAAAAAAAGAAAAGATTCCATTGCCTACAGCGAAGAGTCAATCTCACGGATACATCGGAGCCCCCGGTTAATCCGCTTCATCTTTCATCTGTGCTGCAGTCGTGGATTTTAATGAGTTGCAGGCGACCCATTCAGATGTAATGGTGTGGAGGTCAACGTGGGTCAAGTTTAAAAAGGGGGGG-CTCAGGGGTAGAAGGAAGAAACGGGGACACTTGTCATGATCACAGCCGGGAGGAGAAATGGATCCGCTGGGCTTGgagaaagagggaaggagagacagagagtgggagacagaggggagagagggCACCATCTGCCCCACCTTGTCTGGATGG-CGCCACCCAGGGCGGAGAGAGGTCGCACTTCTTTAACACTGAGACGGCCAGGATTTTGAGGGACAGCTCTGAACCGGCTGATTTGTAGGGAACTAGAATTGTTATTCTCGTGTTTTTTGCTA i panTro4.chr6 M 368 C 0 s ponAbe2.chr6 172449487 786 + 174210431 GTTGCAGTGAGTCGCAGCCTACGTGAATGTTTGGGTTTGACATGAAAGGGCCTTGGGTATGGGGCATTGCCAACTCCTGATTGTGCCCACTGGGAGGACCCCATAGTCGTCGCCAAGAAGTGGTGGTCGCCACTCTTCCCAGGGGCGAGGAAAAATGAATGGCCCAGTGCAGGCCCACACGCAGGGATGGCACAGCCGGCTTGTGAGGGGCAGAGGCTGGAGCAATGGGG-AGGGGCTGTTTCGAGGAATGGAGATAATGAGCATCTTCAGAAACCCTTCTGTTTAATTCACTCTTGATTGATTGTTAAGAAAAAAAGAAATGATTGTTAAGAAAAAAAGAAAAGATTCCATTGCCTACGGCGAAGAGTCAATCTCATGGACACATCGGAGCCCGCGGTTCATCCGCTTCATCTTTCATCTGTGCTGCGCTCGTGGATTTTAATGAGATGCAGGCGACCCATTCAGATGTAATGGTGTGGAGGTCAACGTGGGTCAAGTTTAAAAAGGGCGGG-CTCAGGGAGAGAAGGAAGAAACCAGGACACTTGTCATGATCACGGTCAGGAGGAGAAATGGATCCACTGCGCTTGgagaaagagggaaggagagacagagagtgggagacagaggggagagagggCACCATCTGCCCCACCTCGTCTGGATGG-CGCCACCCGGGGCGGGGAGAGGTCGCACTTCTTTAACACTGAGACGGCCAGGATTTTGAGGGACAGCTCTGAACCGGCTGATTTGTAGGGAACTAGAATTGTTATTCTTGTG-TTTTTGCTA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156306121 766 + 157873769 GTTGCAGTGAGTCGCAGCCTACGTGAATGTTTGGGTTTGACATGAAAGGGCCTCGGGTCTGGGGCATTGCCAACTCCTGATTGTGCCCACTGGGAGGGCCCCATAGTCGTCGCCAAGAGGCAGTGGTCGCCACTCTTCCCAGGGGCGAGGAAAAATGAATGGCCCAGTGCAGGCCCACACGCGGGGATGGCACAGCCGGCTTGTGAGGGGCAGAGGCTGGAGCAATGGGG-AGGGGCTGTTTCAAGGAATGGAGGTAATAAGCGTCTTCGGAAACCCTTCTGTTTAATTCACTCTTGAT----------------------TGATTGTTAAGAAAAAAAGAAAAGATTCCATTGCCTACAGCGAAGAGTCAATCTCACGGATCCATCGGAGCCCCCGGTTCATCGGCTTCATCTTTCGTCTGTGCTGCGCTCGCGGATTTTAATGAGTTGCAGGCGACCCATTCAGATGTAATGGTGTGGAGGTCAACGTGGGTCAAGTTTAAAAAGGGGGGGTCTCAGGGAGAGAAGGAAGAAACGGGGACACTTGTCATGATCACAGCCGGGAGGAGAAATGGATCCGCTGGGCTTGgagaaagagggaaggagagacagagagagggagacagaggagagagagGGCACCATCTCCCCCACCTCGTCCGGATGG-TGCCACCCGGGGCAGGGAGAGGTCGCACTTCTTTAACACTGAGACGGCCAGGATTTTGAGGGACAGCTCTGAACCAGCTGATTTGTAGGGAACTAGAATTGTTATTCTTGTGTTTTTTGCTA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168125145 756 + 169853907 GTTGCAGCGAGTCGCAGTCTACGTGAATGTTTGCGTCTGACATGAAAGGGCCTTGGGTATGGGGCATTGCCAACTCCTGATTGTGCCTATTGAGAGGGCCCCATGGTCGTCGCCAACAAGTGGTGGTCGCCACTCTTCCCAGGGGCGAGGAAAAATGAATGGCCCGGTGCAGGCCCACACGCAGGGATGGCACAGCCGGCTTGTGAGGGGCAGAGGCTGGAGCAATGGGG-AGGGGGTGTTTCGAGGAATGGAGATAATGAGTGACTTCGGAAACACTTCTGTTTAATTCACTCTCGAT----------------------TGATTGTTAAGAAAAAAAGAAAAGATTCCGTTGCCTACAGCAAAGAGTCAATCTTA---------CGGAGCCCCGGGTTCACCCGCTTCATCTTTCATCTGTGCTGCGCTCACGGATTTTAATCAGTTGCAGGAGACCCTTTCAGATGTAATGGTGTAGAGGTCAACGTGGGTCACGTTTTAAAAGGGGGCG-CTCAGGGAGGGAAGGAAGAAACGGGGACACTTGTCATGATCACAGCCGGGAGGAGAAATGGATCTGCTTGGCTTGgagaaagagggaaggagagacagagagagggacacagagaggagagagGGCACCGTCTCCCCCACCTCGTCCAGATGG-TGCCACTCGGCGCGGGGAAAGGTCGTGCTCCTTTAACACTGAGACAGCCAGGATTTTGAGGCACAGCTCTGAACCAGTTGATTTGTAGGGAACTAGAATTGTTGTTCTTGTGTTTTTTGCTG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169080400 756 - 170955103 GTTGCAGCGAGTCGCAGTCTACGTGAATGTTTGCGTCTGACATGAAAGGGCCTTGGGTATGGGGCATTGCCAACTCCTGATTGTGCCTATTGAGAGGGCCCCATGGTCGTCGCCAACAAGTGGTGGTCGCCACTCTTCCCAGGGGCGAGGAAAAATGAATGGCCCGGTGCAGGCCCACACGCAGGGATGGCACAGCCGGCTTGTGAGGGGCAGAGGCTGGAGCAATGGGG-AGGGGGTGTTTCGAGGAATGGAGATAATGAGTGACTTCGGAAACACTTCTGTTTAATTCACTCTCGAT----------------------TGATTGTTAAGAAAAAAAGAAAAGATTCCGTTGCCTACAGCAAAGAGTCAATCTTA---------CGGAGCCCCGGGTTCACCCGCTTCATCTTTCATCTGTGCTGCGCTCACGGATTTTAATCAGTTGCAGGAGACCCTTTCAGATGTAATGGTGTAGAGGTCAACGTGGGTCACGTTTTAAAAGGGGGCG-CTCAGGGAGGGAAGGAAGAAACGGGGACACTTGTCATGATCACAGCCGGGAGGAGAAATGGATCTGCTTGGCTTGgagaaagagggaaggagagacagagagagggacacagagaggagagagGGCACCGTCTCCCCCACCTCGTCCAGATGG-TGCCACTCGGGGCGGGGAAAGGTCGTGCTCCTTTAACACTGAGACAGCCAGGATTTTGAGGGACAGCTCTGAACCGATTGATTTGTAGGGAACTAGAATTGTTGTTCTTGTGTTTTTTGCTG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163897998 756 + 165299245 GTTGCAGCGAGTCGCAGTCTACGTGAATGTTTGCGTCTGACATGAAAGGGCCTTGGGTATGGGGCATTGCCAACTCCTGATTGTGCCTATTGAGAGGGCCCCATGGTCGTCGCCAACAAGTGGTGGTCGCCACTCTTCCCAGGGGCGAGGAAAAATGAATGGCCCGGTGCAGGCCCACACGCAGGGATGGCACAGCCGGCTTGTGAGGGGCAGAGGCTGGAGCAATGGAG-AGGGTCTGTTTCGAGGAATGGAGATAATGAGTGACTTCGGAAACACTTCTGTTTAATTCACTTTCGAT----------------------TgattgttaagaaaaaaagaaaagattccgTTGCCTACAGCAAAGAGTCAATCTTA---------CGGAGCCCCCGGTTCACTCGCTTCATCTTTCATCTGTGCTGCACTCACGGATTTTAATCAGTTGCAGGAGACCCTTTCAGATGTAACGGTGTAGAGGTCAACGTGGGTCACGTTTTAAAAGGGGGCG-ctcagggagggaaggaagaaacgGGGACACTTGTCATGATCACAGCCGGGAGGAGAAATGGATCTGCTGGGcttggagaaagagggaaggagagacggagagggggacacagagaggagagagggcaCCGTCTCCCCCACCTCGTCCAGATGG-TGCCACTCGGGGCGGGGAGCGGTCGCGCTCCTTTAACACTGAGACAGCCAGGATTTTGAGGGACAGCTCTGAACTGGTTGATTTGTAGGGAACTAGAATTGTTGTTCTTGTGTTTTTTGCTG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96685181 756 + 98384682 GTTGCAGCGAGTCGCAGTCTACGTGAATGTTTGCATCTGACATGAAAGGGCCTTGGGTATGGGGTATTGCCAACTCCTGATTGTGCCTATTGAGAGGGCCTCATGGTCGTCGCCAACAAGTGGTGGTCGCCACTCTTCCCAGGGGCGAGGAAAAATGAATGGCCCGGTGCAGGCCCACACGCAGGGATGGCACAGCCGGCTTGTGAGGGGCAGAGGCTGGAGCAATGGGG-AGGGGCTGTTTCGAGGAATGGAGATAATGAGCGTCTTCGGAAACACTTCTGTTTAATTCACTCTTGAT----------------------TGATTGTTAAGAAAAAAAGAAAAGATTCCGTTGCCTACAGCAAAGAGTCAATCTTA---------CGGAGCCCCCGGTTCACCCGCTTCATCTTTCATCTGTGCTGTGCTCACGGATTTTAATCAGCTGCAGGTGACCCATTCAGATGTAATGGTGTGGAGGTCAACATGGGTCACGTTTTAAAAGGGGGCG-CTCAGGGAGGGAAGGAAGAAACAGGGACACTTGTCATGATCACAGCCGGGAGGAGAAATGGATCTGCTTGGCTTGgagaaagagggaaggagagacagagagagggacacagaggggagagagGGCACCGTCTCCCCCACCTCGACGAGATGG-TGCCACTCGGGGCGGGGAGCGGTCGCACTCCTTTTACACTGAGACAGCCAGGATTTTGAGGGACAGCTCTGAACTGGCTGATTTGTAGGGAACTAGAATTGTTGTTCTTGTGTTTTTTGCTA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169889264 735 + 171630274 GTTGCGGCCAGTCGCAGCCCACGTGGGTGCTTGGGTTTTACATGAAAGGGCCTTGGGTATGGGGCACTGCCAACTCCTGATTGTGCCCATTGGGAGGGTCCCACCGTCGCCGCCAAGATGTGGTGGTTGCCACTCTTCCCAGAGGCGAGGAAAAATGAATGGCCTGGTGCAGGCCCACACGCAGGGGTCCCACCACT-GCGTGTGAGGGGCAGTGGCTGGAGCAATGGGGAAGGGGCTGCTTTGAGGAATGGAGCTAATGAGCGTCTTCAGAAACGCTTCTGTTTAGTTCATTCTCGAT----------------------TGACTGTTCAGACAAA-AGGAATGATTCCGTTACCTACAGCGGAGAGTCAATCTCTCAGACTCA-TGGAGGCCCCGG---------TTCATCTTTCTTCCGTACTGCACTGGTGGAGTTTAATGAGTTGCAGGCGACCCACGCAGATGTCATGGTGTGGAGGTCAATGTGGGTCAAGTTTAAAAAGGG-GTG-CTCAGACAGAGAAGGAACAAATGAGGACACTTGTCATGATCACAGCCAGGAAGAGAAAAGGATCTACTGGGCTTGGTGAAAGAGGGAC----------AGAGAGGGAGACAGAAGGGAGAGAGGACACCATCT-CCTCACCTCCCCTGGGTGACTGCCACGT-GGGCGGGGAG-GGTC---CTTCTTTAACACTGAGATGGTCAGGATTTTGAAG-AGAGCTCTGAACCCGCTGATTTGTAGGAAGT--GAATTGTTATTTCTTTGGGTTTTGCTA i calJac3.chr4 C 0 M 3708 e canFam3.chr1 56173082 6728 + 122678785 I a score=1266618.000000 s hg38.chr6_KB021644v2_alt 108447 536 + 185823 CCACCAAGGAGTTCTCCACAGAGGCCCATCTCTCAGGTGGGTTCTACGAGGCTTCACACTCCCGCACTGCAGTTTTGTGGCTCCATGGCTGCTATGGGACCGTCATGCTGGGGAGGCTGCAGAAGGGGGTGCGGGGCCCTCTTTAGATGGAAGAGGGAAGAGCCAGCCTCATCCCCCTCAAGGACAAAGGCCTGCCTGCTGCATCCCCCTCCCGCTTCTGGGGGGTCTTTGTGAAGAAAAACTTA----CAGTGTGGTCTTGTGTGATTTTTACTTTATGTTAGGGCAAATGTATTCAAATTACGGCTCTAAAGGACGTGAGGGTTATTCCAGTCTGAGTTTTAGCTTTTAGCTTTGATTTCCTAAATACAGAGGTAATAAAATATTTTCTATTTCTTTGTATTACAGATTTGCTTTTTCACATTTAGATCTTTGAATCACAGATAACACAGATAATCACAGTAATGGAAGAAATCAAAGTAACTAAACACCACTCTGGAAAGGACAGAGACAACAGACCGAGTAGCTCAACTGCTACCG s panTro4.chr6 170692732 535 + 172623881 CCACCAAGGAGTTCTCCACAGAGGCCCATCTCT-AGGTGGGTTCTACGAGGCTTCACACTCCTGCACCGCAGTTTTGTGGCTCTATGGCTGCTATGGGACCGTCATGCTGGGGAGGCTGCGGAAGGGGGTGCGGGGTCCTCTTTAGATGGAAGAGGGAAGAGCCAGCCTCATCCCCCTCAAGGACAAAGGCCTGCCTGCTGCATCCCCCTCCCGCTTCTGGGGGGTCTTTGTGAAGAAAAACTTA----CAGTGTGGTCTTGTGTGATTTTTACTTTATGTTAGGGCAAATGTATTCAAATTATGGCTCTAAAGGACGTGAGGGTTATTCCAGTCTGAGTTTTAGCTTTTTGCTTTGATTTCCTAAATACAGAGGTAATAAAATATTTTCTATTTCTTTGTATTACAGATTTGCTTTTTCACATTTAGATCTTTGAATCACAGATAACACAGATAATCACAGTAATGGAAGAAATCAAAGTAACTAAACACCACTCTGGAAAGGACAGAGACAATCGACCGAGTAGCTCATCTGCTACCG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172450273 536 + 174210431 CCACCAAGGAGTTCTCCACAGAGACCCATCCCTCAGGTGCGTTCCACGAGGCTTCACACTCCCACACCGCAGTTTTGTGGCTCTGTGGCTGCTGTGGGACCATCATGCTGGGGAGGCTGTGGAAGGGGGTGCGGGGCGCTCTTTAGATGGAAGAGGGAAGAGTCAGCCTCATCCCCCTCAAGGACAAAGGCCTGCCTGCTGCATCCCCCTCCCGCTTCTGGGGGGTCTTTGTGAAGAAAAACTTA----CAGTGTGGTCTTGTGTGATTTTTACTTTATGTTAGGGCAAATGTATTCAAATTATGGCTCTAAAGGACGTGAGGGTTATTCCAGTCTGAGTTTTAGCTTTTAACTTTGGTTTCCTAAATACAGAGGTAATAAAATATTTTCTATTTCTTTGTATTACAGATTTGCTTTTTCACATTTAGATCTTTGAATCACAGATAACACAGATAATCACAGTAATGGAAGAAATCAAAGTAACTAAACACTACTCCAGAAAGGACAGAGACAATAGACCGAGTAGCTCATCTGCTAATG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156306887 540 + 157873769 CCACCAAGGAGTTCTCCACAGAGGCCCACCTCTCAGGTGCGTTCCACGAGGCTTCACACTCCCACACCACGGTTTCGTGGCTCTGTGGCTGCTGTGGGACCATCATGCCGGGGAGGCTGTGGAAGCGGGTGCGGGGCGCTCTTTAGATGGAAGAGGGAAGAGCCAGCCTCATCCCTCTCAAGGACAAAGGCCTGCTTGCTGCATCCTCCTCCCCCTTCTGGGGGGTCTTTGTGAAGAAAAACTTACAGTCAGTGTGGTCTTGTGTGATTTTTACTTTATGTTAGGGCAAATGTATTCAAATTATGGCTCTAAAGGACATAAGGGTTATTCCAGTCTGAGTTTTAGCTTTTAACTTTGGTTTCCTAAATACAGAGGCAATAAAATATTTTCTATTTCTTTGTATTACAGATTTGCTTTTTCACATTTAGATTTTTGAATCACAGATAACACAGATAATCACAGTAATGGAAGAAATCAAAGTAACTAAACACTACTCTGGAAAGTACAGAGAAAATAGACCGAGTAGCTCATCTGCTAACG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168125901 534 + 169853907 CCACCAAGGAGTTCTCCACAGAGGCCCATCTCTCAGGTGTGTTCCATGAGGCTTCAGACTCCCACACTGCTGTTTCGTGGCTCTGTGGCTGCTGTGGGACCATCCTGCT-GGGAGGCTGCGGAACGGGGTGCGGGGCGCTCTTCAGATGGAAGAGGGAAGAGCCAGCCGCATCCCCCTCAAGGACAAAGCACTGCCTGCTGCATCCCTGTCCCCCTTCTGGGGGGTCTTAGTGAAGAAAAACTCA----CAGTGTGGTCTTGTGTGATTTTTACTTGATGTTAGGGCAAATGTATTCAAATTATGGCTCTAAAGGATGTGAGGGTTATTCCAGTCTGAGTTTTAGCTTTTAACTTTGGTTTCCTAAATATAGAGATAATAAAATATTTTCTATTTCCTTGTATTACAGATTTGCTTTTTCGCATTTAGATGTTTGAATCACAGATAACACAGATAATCACAGTAATGGGAGAAATCAAAGTAGCTAAACATTACTCTGGCAAGGACAGAGA-AATAGACCGAGTAGCTCATCTGCTAACA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169081156 534 - 170955103 CCACCAAGGAGTTCTCCACAGAGGCCCATCTCTCAGGTGTGTTCCAGGAGGCTTCAGACTCCCACACTGCTGTTTCGTGGCTCTGTGGCTGCTGTGGGACCATCCTGCT-GGGAGGCTGCGGAACGGGGTGCGGGGCGCTCTTCAGATGGAAGAGGGAAGAGCCAGCCGCATCCCCCTCAAGGACAAAGCACTGCCTGCTGCATCCCTGTCCCCTTTCTGGGGGGTCTTAGTGAAGAAAAACTCA----CAGTGTGGTCTTGTGTGATTTTTACTTGATGTTAGGGCAAATGTATTCAAATTATGGCTCTAAAGGATGTGAGGGTTATTCCAGTCTGAGTTTTAGCTTTTAACTTTGGTTTCCTAAATATAGAGATAATAAAATATTTTCTATTTCCTTGTATTACAGATTTGCTTTTTCGCATTTAGATGTTTGAATCACAGATAACACAGATAATCACAGTAATGGGAGAAATCAAAGTAGCTAAACATTACTCTGGCAAGGACAGAGA-AATAGACCGAGTAGCTCATCTGCTAACA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163898754 534 + 165299245 CCACCAAGGAGTTCTCCACAGAGGCCCATCTCTCAGGTGTGTTCCATGAGGCTTCAGACTCCCACACTGCTGTTTCGTGgctctgtggctgctgtgggaccATCCTGCT-GGGAGGCTGCGGAAGGGGGTGCGGGGCGCTCTTCAGATGGAAGAGGGAAGAGCCAGCCGCATCCCCCTCAAGGACAAAGCACTGCCTGCTGCATCCCTGTCCCCCTTCTGGGGGGTCTTAGTGAAGAAAAACTCA----CAGTGTGGTCTTGTGTGATTTTTACTTTATGTTAGGGCAAATGTATTCAAATTATGGCTCTAAAGGATGTGAGGGTTATTCCAGTCTGAGTTTTAGCTTTTAACTTTGGTTTCCTAAATATAgaggtaataaaatattttctatttccttgtatTACAGATTTGCTTTTTCGCATTTAGATCTTCGAATCACAGATAACACAGATAATCACAGTAATGGAAGAAATCAAAGTAGCTAAACATTACTCTGGAAAGGACAGAGA-AATAGACTGAGTAGCTCATCTGCTAACA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96685937 532 + 98384682 CCACCA---AGTTCTCCACGGAGGCCCATCTCTCAGGTGTGTTCCACGAGGCTTCAGACTCCCACACTGCCGTTTCGTGGCTCTGTGGCTGCTGTGGGACCATCCTGCTGGGGAGGCTGCGGAAGGGGGTGTGGGGTGCTCTTCAGATGGAAGAGGGAAGAGCCAGCCGCACCCCCCTCAAGGACAAAGCGCTGCCTGCTGCATCCCTGTCCCCCTTCTGGGGGGTCTTTGTGAAGAAAAACTTA----CAGTGTGGTCTTGTGTGATTTTTACTTTATGTTAGGGCAAATGTATTCAAATTATGGCTCTAAAGGACGTGAGGGTTATTCCAGTCTGAGTTTTAGCTTTTAACTTTGGTTTCCTAAATATAGAGGTAATAAAATATTCTCTATTTCCTTGTATTACAGATTTGCTTTTTCACATTTAGATCTTTGAATCACAGATAACACAGATAATCACAGTAATGGGAGAAATCAAAGTAACTAAACATTACTCTGGAAAGGACAGAGA-AATAGACCAAGTAGCTCATCTGCTGACA i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169889999 3708 + 171630274 M e canFam3.chr1 56173082 6728 + 122678785 I a score=116874.000000 s hg38.chr6_KB021644v2_alt 108983 39 + 185823 TGAGCATGTGTGTATACAGGTAAGTTGCTATGTACACAC s panTro4.chr6 170693267 39 + 172623881 TGAGCATGTGTGTATACAGGTGAGTTGCTATGTACACAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172450809 39 + 174210431 TGAGCATGTGTGTATACAGGTGAGTTGCTATGTACACAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156307427 39 + 157873769 TGAGCATGTGTGTATACAGGTGAGTTGCTATGTACACAC i nomLeu3.chr3 C 0 I 2 s rheMac3.chr4 168126435 39 + 169853907 CAAGCATGTGTGTACACAGGTGAGTTGCTATGTACACAC i rheMac3.chr4 C 0 I 2 s macFas5.chr4 169081690 39 - 170955103 CGAGCATGTGTGTACACAGGTGAGTTGCTATGTACACAC i macFas5.chr4 C 0 I 492 s papAnu2.chr4 163899288 39 + 165299245 CGAGCATGTGTGTACACAGGTGAGTTGCtatgtacacac i papAnu2.chr4 C 0 I 117 s chlSab2.chr13 96686469 39 + 98384682 CAAGCATGTGTGTATACAGGTGAGTTGCTATGTACACAC i chlSab2.chr13 C 0 I 2 s calJac3.chr4 169893712 38 + 171630274 TGAGCATGTGTGAATATAGGTGAGTCACTATG-ACACAC i calJac3.chr4 M 3708 C 0 e canFam3.chr1 56173082 6728 + 122678785 I a score=73789.000000 s hg38.chr6_KB021644v2_alt 109022 27 + 185823 GTGTATATGTCCTAACATGAGCATACA s panTro4.chr6 170693306 27 + 172623881 GTGTATATGTCCTAACATGAGCATACA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172450848 27 + 174210431 GTGTATATGTCCTAACATGAGCATACA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156307468 27 + 157873769 GTGTGTATGTCCTAACGTGAGCATACA i nomLeu3.chr3 I 2 C 0 s rheMac3.chr4 168126476 27 + 169853907 GTGTGTATGTCCTAATGTGAGCATACA i rheMac3.chr4 I 2 I 417 s macFas5.chr4 169082221 27 - 170955103 GTGTATATGTCCCAACGTGAGCATACA i macFas5.chr4 I 492 I 1 s papAnu2.chr4 163899444 27 + 165299245 gtgtatgtgtcccAACGTGAGCATACA i papAnu2.chr4 I 117 I 1 s chlSab2.chr13 96686510 27 + 98384682 ATGTATATGTCCTAACGTGAGCATACA i chlSab2.chr13 I 2 I 1 s calJac3.chr4 169893750 25 + 171630274 --ATGCATGTACTAACATGAGCATGTG i calJac3.chr4 C 0 I 1 e canFam3.chr1 56173082 6728 + 122678785 I a score=63711.000000 s hg38.chr6_KB021644v2_alt 109049 33 + 185823 GTATACAGGCTAGTCGTCATGTACACAC--AGTGC s panTro4.chr6 170693333 33 + 172623881 GTATACAGGCTAGTCGTCATGTACACAC--AATGC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172450875 33 + 174210431 GTATACAGGCGAGTTGTCATGTACACAC--AATGC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156307495 33 + 157873769 GTATACAGGCGAGTCATCATGTACACAC--GATGC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169082249 35 - 170955103 GTATACAGGCAAGTCATCATGTACACACGTGATGC i macFas5.chr4 I 1 I 40 s papAnu2.chr4 163899472 35 + 165299245 GTATACAGGCAAGTCATCATGTACACACATGATGC i papAnu2.chr4 I 1 I 58 s chlSab2.chr13 96686538 33 + 98384682 GTATACAGGCAAGTCGTCACATACACAC--GATGC i chlSab2.chr13 I 1 I 173 s calJac3.chr4 169893776 35 + 171630274 GTATTCAGGTGAGTCACTGTGAACACACATGATGC i calJac3.chr4 I 1 C 0 e canFam3.chr1 56173082 6728 + 122678785 I e rheMac3.chr4 168126503 417 + 169853907 I a score=157106.000000 s hg38.chr6_KB021644v2_alt 109082 57 + 185823 ATGTCCTAACGTGAGCATGTGTGTATATAGGCGAGTTGCTATGTACCCATGTGATGT s panTro4.chr6 170693366 57 + 172623881 ATGTCCTAACCTGAGCATGTGTGTATATAGGCGAGTTGCTATGTACCCATGTGATGT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172450908 57 + 174210431 GTGTCCTAACGTGAGCATGTGTGTGTATAGGAGAGTTGCTATGTACCCGTATGATGT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156307528 57 + 157873769 ATGTCCTAAGGTGAGCATGTGTGTATACAGGCGAGTTGCTATGTACCCATATGATGT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168126920 57 + 169853907 atgtactaatgtgagcatgtgtgtatacaggcgagttgctaagtacccatatgatgt i rheMac3.chr4 I 417 C 0 s macFas5.chr4 169082324 57 - 170955103 ATGTACTAATGTGAGCATGTGTGTATACAGGCGAGTTGCTAAGTACCCATATGATGT i macFas5.chr4 I 40 C 0 s papAnu2.chr4 163899565 57 + 165299245 ATGTACTAACGTGAGCATGTGTGTATACAGGTGAGTTGCTAAGTACCCATATGATGC i papAnu2.chr4 I 58 C 0 s chlSab2.chr13 96686744 57 + 98384682 ATGTACTAACGTGAGCATGCGTGTATACAGGTGAGTTGCTAAGTACCCATATGATGT i chlSab2.chr13 I 173 C 0 s calJac3.chr4 169893811 57 + 171630274 ATGTACTAACGTGAGCATGTGGGTATACAGGTGAGTCACTATGAAcaagcatgatgc i calJac3.chr4 C 0 I 1151 e canFam3.chr1 56173082 6728 + 122678785 I a score=936837.000000 s hg38.chr6_KB021644v2_alt 109139 346 + 185823 ATGTACTAATACGAGCATGCATGTATACAGGCGAGTCACTAGGTACACACATGCATACGTATACTAACGTGAGCATGTGTGTATACAGGGACAGTTGCTATGTACACACATGCACATATGTACCTGTGCATAACCAAAGTCTGCAAATAATGGGATATTGTTAATATTTAAAATGATCCTTGAAAACCCTTTAAATTCATTTAAGGCTCAGTGGCTCTTCAATGAGCAGGGGTAGAGGATGGAGGGCCAGCAGCACAGCCATGGTCCCGAGAGTCACTCCTGAACTAGCCAGTG-TGGGGGCCA-GCCCT--TCTGCTCATGCAGCCAGTGGTCAGCTACAGGCACAGTC s panTro4.chr6 170693423 346 + 172623881 ATGTACTAATACGAGCATGCATGTATACAGGCGAGTCACTAGGTACACACATGCATACGTATACTAACGTAAGCATGTGTGTATACAGGGACAGTTGCTATGTACACACATGCACATATATACCTGTGCATAACCAAAGTCTGCAAATAATGGGATATTGTTAATATTTAAAATGATCCTTGAAAACCCTTTAAATTCATTTAAGGCTCAGTGGCTCTTCAATGAGCAGGGGTAGAGGATGGAGGGCCAGCAGCACAGCCATGGTCCCAAGAGTCACTCCTGAACAAGCCAGTG-TGGGGGCCA-GCCCT--TCTGCGCATGCAGCCAATGGTCAGCTACAGGCACAGTC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172450965 346 + 174210431 ATGTACTAATATGAACATGCATGCTTACAGGCGAGTCACTACGCACACACATGCATACATATACTAATGTGAGCATGTGTGTATACAGGGACAGTTGCTATGTACACACATGCCCATATGTACCTGTGCATAACCAAAGTCTGCAAATAATGGGATATTGTTAATATTTAAAATGATCCTTGAAAACCCTTTAAATTCATTTAAGGCTCAGTGGCTCTTCAATGAGCACGGGTAGAGGATGGAGGGCCAGCAGCACAGCCATGGTCCCGAGAGTCACTCCTGAACAAGCCAGTG-TGGGGGCCA-GCCCT--TCTGCGCATGCAGCCAATGGTCAGCTACAGGCACAGTC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156307585 347 + 157873769 ATGTACTAATATGAACATGCATGTATACAGGCGAGTCACTATGTACACACATGCCTACGTATACTAACGTGAGCATGTGTGTATACAGGGACAGTTGCTATGTACACACATGCACATATGTACCTGTGCATAACCAAAGTCTGCAAATAATGGGATATTGTTAATATTTAAAATGATCCTTGAAAACCCTTTAAATTCATGTAAGGCTCAGTAGCTCTTCAATGAGCAGGGGTAGACGATGGAGGGCCAGCAGCACAGCCATGGTCCTGAGAATCGCTCCTGAACAAGCCAGTGCTGGGCCCCA-GCCCT--TCTGTGCATGCGGCCAATGGTCAGCTACAGGCACAGTC i nomLeu3.chr3 C 0 I 14 s rheMac3.chr4 168126977 344 + 169853907 gtgtactaatatgaacatgcatgtatacaggcgagtcactatgtacacacatgcatgcgtgtactaacatgcacatgcatgtacacaGGGAGAGTTGCTATGTACACATATGCATATATGTACCTGTGCATAACCAAAGTCTGCAAATAATGGGATATTGTAAAT-TTTAAAATGATCCTTGAAAACCCTTTAAATTCATTTAAGGCTCAGTGGCTCTTCAATGAGCAGGGATAGAGGATGGAGGGCCAGCAGCACAGCCATGGTGCC--GAGTCACTCCTGAACAAGCCAGTG-CGGGGGCCCTGCCCT--TCTGTGCATACGGCCAATGGTCAACGGCAGGCACAGTC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169082381 344 - 170955103 GTGTACTAATATGAACATGCATGTATACAGGCGAGTCACTATGTACACACATGCATGCGTGTACTAACATGCACATGCGTGTACACAGGGAGAGTTGCTATGTACACATATGCATATATGTACCTGTGCATAACCAAAGTCTGCAAATAATGGGATATTGTAAAT-TTTAAAATGATCCTTGAAAACCCTTTAAATTCATTTAAGGCTCAGTGGCTCTTCAATGAGCAGGGATAGAGGATGGAGGGCCAGCAGCACAGCCATGGTGCC--GAGTCACTCCTGAACAAGCCAGTG-CGGGGGCCCTGCCCT--TCTGTGCATACGGCCAATGGTCAACGGCAGGCACAGTC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163899622 346 + 165299245 ATGTACTAATATGAACATGCATGTATACAGGCGAGTCactatgtacacacatgcatgcatgtactAACATGCACATGCGTGTATACAGGGAGAGTTGCTatgtacacatatgcatgtatgtaccTGTGCATAACCAAAGTCTGCAAATAATGGgatattgttaat-tttaaaatgatcctTGAAAACCCTTTAAATTCATTTAAGGCTCAGTGGCTCTTCAATGAGCAGGGGTAGAGGATGGAGGGCCAGCAGCCTAGCCATGGTGCCAAGAGTCACTCCTGAACACGCCAGTG-TGGGGACCCTGCCCT--TCTGTGCATATGGCCAATGGTCAACGGCGGGCACAGTC i papAnu2.chr4 C 0 I 14 s chlSab2.chr13 96686801 343 + 98384682 ATGTACTAATATGAACATGCATGTATACAGGCGAGTCACTATGTACACACATGCATACATGTACTAACATGCACGTG--TGTATACAGGGAGAGTTGCTATATACACATATGCATATATGTACCTGTGTATAACCAAAGTCTGCAAATAATGGGATATTGTTAATATGTAAAATGATCCCTGAAAATCCTTTAAATTCATTTAAGGCTCAGTGACTCTTCAGTGAGCAGGGGTAGAGGATGGAGGGCCAGCAGCACAGCCATGGTGCC--GAGTCACTCCTGAACAAGCCAGTG-CGGGGGCCCTGCCCT--TCTGTGCATACGGCCAATGGACAACGGCAGGCACAGTC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169895019 333 + 171630274 ATGTACTAATGTGAGCATGCGTGTATACAGGTGAGTCATTATGAACACACATGCA----TGTACTAATGTGAGCATGTGTGTATACAGGCA-AGTCACTATGTACACATG---ATGCACTAACATGAGCATAACCAACATCTGCAAATAAT-GGATGCTGTTCATATTTAAAATGATCCTTGAACACCATGTAAGTACATTTCCCGCTCAGTGGCTCTTCAGTCAGCAGGGGTGGAGGAGGGGGGGCCAGCAGCACAGCCTCAGTCCCGAGAGTGACTCCTGAACAAGCCAGGG-CAG-------GCCCTGCTCTGCACTTGAGGCCAGTGGTCAACCACAGGCACAGTC i calJac3.chr4 I 1151 C 0 e canFam3.chr1 56173082 6728 + 122678785 I a score=17190.000000 s hg38.chr6_KB021644v2_alt 109485 12 + 185823 AACAGTGGTGAC s panTro4.chr6 170693769 12 + 172623881 AACAGTGGTGAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172451311 12 + 174210431 AACAGTGGTGAC i ponAbe2.chr6 C 0 I 280 s rheMac3.chr4 168127321 12 + 169853907 AACAGTGGTGAC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169082725 12 - 170955103 AACAGTGGTGAC i macFas5.chr4 C 0 C 0 s chlSab2.chr13 96687144 12 + 98384682 AACAGTGGTGAC i chlSab2.chr13 C 0 I 2 e calJac3.chr4 169895352 0 + 171630274 C e canFam3.chr1 56173082 6728 + 122678785 I e papAnu2.chr4 163899968 14 + 165299245 I e nomLeu3.chr3 156307932 14 + 157873769 I a score=4011.000000 s hg38.chr6_KB021644v2_alt 109497 2 + 185823 AG s panTro4.chr6 170693781 2 + 172623881 AG i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156307946 2 + 157873769 AG i nomLeu3.chr3 I 14 C 0 s rheMac3.chr4 168127333 2 + 169853907 AG i rheMac3.chr4 C 0 I 2 s macFas5.chr4 169082737 2 - 170955103 AG i macFas5.chr4 C 0 I 117 s papAnu2.chr4 163899982 2 + 165299245 AG i papAnu2.chr4 I 14 C 0 s chlSab2.chr13 96687158 2 + 98384682 AG i chlSab2.chr13 I 2 C 0 e calJac3.chr4 169895352 0 + 171630274 C e canFam3.chr1 56173082 6728 + 122678785 I e ponAbe2.chr6 172451323 280 + 174210431 I a score=2095.000000 s hg38.chr6_KB021644v2_alt 109499 2 + 185823 CA s panTro4.chr6 170693783 2 + 172623881 TG i panTro4.chr6 C 0 I 330 s nomLeu3.chr3 156307948 2 + 157873769 CG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168127337 2 + 169853907 CG i rheMac3.chr4 I 2 C 0 s macFas5.chr4 169082856 2 - 170955103 CG i macFas5.chr4 I 117 C 0 s papAnu2.chr4 163899984 2 + 165299245 TG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96687160 2 + 98384682 CG i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169895352 0 + 171630274 C e canFam3.chr1 56173082 6728 + 122678785 I e ponAbe2.chr6 172451323 280 + 174210431 I a score=34169.000000 s hg38.chr6_KB021644v2_alt 109501 14 + 185823 TGTTAGGAGGTGCT s panTro4.chr6 170694115 14 + 172623881 TGTTAGGAGGTGCT i panTro4.chr6 I 330 C 0 s ponAbe2.chr6 172451603 14 + 174210431 TGTTAGGAGGTGCT i ponAbe2.chr6 I 280 C 0 s nomLeu3.chr3 156307950 14 + 157873769 TGTTAGGAGGTGCT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168127339 14 + 169853907 TGTTAGAAGGTGCT i rheMac3.chr4 C 0 I 1470 s macFas5.chr4 169082858 14 - 170955103 TGTTAGCAGATGCT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163899986 14 + 165299245 TGTTAGGAGGTGCT i papAnu2.chr4 C 0 I 1 s chlSab2.chr13 96687162 14 + 98384682 TGTTAGGAGGTGCT i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169895352 0 + 171630274 C e canFam3.chr1 56173082 6728 + 122678785 I a score=17454.000000 s hg38.chr6_KB021644v2_alt 109515 17 + 185823 GGCGTGTATCAGGGGCA s panTro4.chr6 170694129 17 + 172623881 GGGGTGGACCAGGGGCA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172451617 17 + 174210431 GGGGTGTACCAGGGGCA i ponAbe2.chr6 C 0 I 1 s nomLeu3.chr3 156307964 16 + 157873769 GGGGTGGGCC-GGGGCA i nomLeu3.chr3 C 0 I 1 s macFas5.chr4 169082872 17 - 170955103 GGGGTGGGCCAGGGGCA i macFas5.chr4 C 0 I 1 s papAnu2.chr4 163900001 16 + 165299245 GGGGTATATCA-GGGCA i papAnu2.chr4 I 1 I 1 s chlSab2.chr13 96687176 16 + 98384682 GGGGTGTATCG-GAGCA i chlSab2.chr13 C 0 I 1 e calJac3.chr4 169895352 0 + 171630274 C e canFam3.chr1 56173082 6728 + 122678785 I e rheMac3.chr4 168127353 1470 + 169853907 I a score=12579.000000 s hg38.chr6_KB021644v2_alt 109532 5 + 185823 GCTCT s panTro4.chr6 170694146 5 + 172623881 GCTCT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172451635 5 + 174210431 GCTCT i ponAbe2.chr6 I 1 C 0 s nomLeu3.chr3 156307981 5 + 157873769 GCTCT i nomLeu3.chr3 I 1 T 57 s rheMac3.chr4 168128823 5 + 169853907 GCTCT i rheMac3.chr4 I 1470 C 0 s macFas5.chr4 169082890 5 - 170955103 GTTCT i macFas5.chr4 I 1 C 0 s papAnu2.chr4 163900018 5 + 165299245 GCTCT i papAnu2.chr4 I 1 C 0 s chlSab2.chr13 96687193 5 + 98384682 GCTCT i chlSab2.chr13 I 1 C 0 e calJac3.chr4 169895352 0 + 171630274 C e canFam3.chr1 56173082 6728 + 122678785 I a score=32297.000000 s hg38.chr6_KB021644v2_alt 109537 15 + 185823 GTGAACAATGGTGAT s panTro4.chr6 170694151 15 + 172623881 GTGAACAGTAGCGAC i panTro4.chr6 C 0 T 381 s ponAbe2.chr6 172451640 15 + 174210431 GTGAACAGTGGTGAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156307929 15 + 157873769 GTCAACAGTGGTGAC i nomLeu3.chr3 T 57 C 0 s rheMac3.chr4 168128828 15 + 169853907 GTGAACAGTGGTGAC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169082895 15 - 170955103 GTGAACAGTGGTGAC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163900023 15 + 165299245 GTGCACAGTGGGGAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96687198 15 + 98384682 GTGAACAGTGGTGAC i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169895352 0 + 171630274 C e canFam3.chr1 56173082 6728 + 122678785 I a score=8572.000000 s hg38.chr6_KB021644v2_alt 109552 6 + 185823 GGAGCA s ponAbe2.chr6 172451655 6 + 174210431 AGAGTG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156307944 6 + 157873769 AGAGCG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168128843 6 + 169853907 AGAGTG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169082910 6 - 170955103 AGAGTA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163900038 6 + 165299245 AGAGCG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96687213 6 + 98384682 AGAGCG i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169895352 0 + 171630274 C e canFam3.chr1 56173082 6728 + 122678785 I e panTro4.chr6 170694166 381 + 172623881 T a score=68690.000000 s hg38.chr6_KB021644v2_alt 109558 39 + 185823 TGTTAGGAGGTGCTGG-GGTGGACCAGGGGCA-GCTCTGTG s panTro4.chr6 170693785 39 + 172623881 TGTTAGGAGGTGCTGG-GGTGGACCAGGGGCA-GCTCTGTG i panTro4.chr6 T 381 C 0 s ponAbe2.chr6 172451661 36 + 174210431 TGTTAGGAGGTGCTGG-GG----CCAGGGGCAGGCTCTGTG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156307950 39 + 157873769 TGTTAGGAGGTGCTGG-GGTGGGCC-GGGGCAGGCTCTGTG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168128849 41 + 169853907 TGTTAGCAGATGCTGGAGGTGTAGCAAGGGCAGGCTCTGTG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169082916 39 - 170955103 TGTTAGGAGGTGCTGG-GGTGTATC-AGGGCAGGCTCTGTG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163900044 40 + 165299245 TGTTAGGAGATGCTGGGGGTATATT-GGGGCAGGCTCTGTG i papAnu2.chr4 C 0 T 116 s chlSab2.chr13 96687219 39 + 98384682 TGTTAGGAGGTGCTGG-GGTGTATC-GGGGCAGGCTCTGTG i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169895352 0 + 171630274 C e canFam3.chr1 56173082 6728 + 122678785 I a score=105903.000000 s hg38.chr6_KB021644v2_alt 109597 56 + 185823 AACAGTGGTGACGGAGTGTGTTAGGAGGTGCT-GGGGTGGG-CC-GGGGCA-GCTCTGTG s panTro4.chr6 170693824 56 + 172623881 AACAGTGGTGACGGAGCGTGTCAGGAGGTGCT-GGGGTGTA-TC-GGGGCA-GCTCTGTG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172451697 54 + 174210431 AACAGTGGTGACAGAGTGTGTTAGGAGGTGCT-GGGGC----CA-GGGGCAGGCTCTGTG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156307989 58 + 157873769 AACGGTGGTGACACAGCATGTTAGGAGGTGCT-GGGGTGGGCCA-GGAGCAGGCTCTGTG i nomLeu3.chr3 C 0 T 58 s rheMac3.chr4 168128890 57 + 169853907 AACAGTGGTGACAGAGTGTGTTAGTAGATGCT-GGGGTGTA-TT-GGGGCAGGCTCTGTG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169082955 58 - 170955103 AACTGTGGGGACAGAGTGTGTTAGGAGATGCT-GGGGTGGG-CCAGGGGCAGGCTCTGTG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163899968 58 + 165299245 AACAGTGGTGACAGAGTGTGTTAGGAGGTGCTGGGGGTATA-TC-AGGGCAGGCTCTGTG i papAnu2.chr4 T 116 C 0 s chlSab2.chr13 96687258 57 + 98384682 AACAGTGGTGACAGAGCGTGTTAGGAGGTGCT-GGGGGGTA-TC-GGGGCAGGCTCTGTG i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169895352 0 + 171630274 C e canFam3.chr1 56173082 6728 + 122678785 I a score=19903.000000 s hg38.chr6_KB021644v2_alt 109653 12 + 185823 AACAATGGTGAT s panTro4.chr6 170693880 11 + 172623881 ACCAGTGGTGA- i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172451751 12 + 174210431 AACAGTGGTGAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156307989 12 + 157873769 AACGGTGGTGAC i nomLeu3.chr3 T 58 C 0 s rheMac3.chr4 168128947 12 + 169853907 AACAGTGGTGAC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169083013 12 - 170955103 AACAGTGGGGAC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163900026 12 + 165299245 CACAGTGGGGAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96687315 12 + 98384682 AACAGTGGGGAC i chlSab2.chr13 C 0 T 171 e calJac3.chr4 169895352 0 + 171630274 C e canFam3.chr1 56173082 6728 + 122678785 I a score=63932.000000 s hg38.chr6_KB021644v2_alt 109665 43 + 185823 GGAGCGTGTTAGGAGGTGCT-GGGGTGTATC------------------------------------------------------------GGGCA-GCTCTGTG s panTro4.chr6 170693891 45 + 172623881 ACAGCGTGTTAGGAGGTGCT-GGGGTGGGCC----------------------------------------------------------AGGGGCA-GCTCTGTG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172451763 42 + 174210431 AGAGCGTGTTAGGAGGTGCT-GGGG----CC----------------------------------------------------------GGGGGCAGGCTCTGTG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156308001 46 + 157873769 ACAGCATGTTAGGAGGTGCT-GGGGTGGGCC----------------------------------------------------------AGGAGCAGGCTCTGTG i nomLeu3.chr3 C 0 T 115 s rheMac3.chr4 168128959 45 + 169853907 AGAGTGTGTTAGTAGATGCT-GGGGTGTATT-----------------------------------------------------------GGGGCAGGCTCTGTG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169083025 104 - 170955103 AGAGCATATTAGGAGATGCT-GGGGTGTATTGGGGCAGGCTCTGTGAACAGTGGTGACAGATCATGTTAGGAGATGCTGGAGGTGTAGCAGGGGCAGGCTCTGTG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163900038 46 + 165299245 AGAGCGTGTTAGGAGATGCTGGGGGTATATT-----------------------------------------------------------GGGGCAGGCTCTGTG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96687156 45 + 98384682 AGAGCGTGTTAGGAGGTGCT-GGGGTGTATC-----------------------------------------------------------GGAGCAGGCTCTGTG i chlSab2.chr13 T 171 C 0 e calJac3.chr4 169895352 0 + 171630274 C e canFam3.chr1 56173082 6728 + 122678785 I a score=90091.000000 s hg38.chr6_KB021644v2_alt 109708 54 + 185823 AACAGTGGTGATGGAGCGTGTCAGGAGGTGCTGG-GGTGTACCAGGGGCA-GCTCT s panTro4.chr6 170693936 52 + 172623881 AACAGTG-TGACGGAGCGTGTCAGGAGGTGCTGG-GGTGTATT-GGGGCA-GCTCT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172451805 51 + 174210431 AACAGTGGTGACAGAGTGTGTTAGGAGGTGCTG-----GCACCAGGGGCAGGCTCT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156307932 54 + 157873769 AACAGTGGTGACAGAGCGTGTTAGGAGGTGCTGG-GGTGGGCC-GGGGCAGGCTCT i nomLeu3.chr3 T 115 T 57 s rheMac3.chr4 168129004 56 + 169853907 GACAGTGGGGACAGAGTGTGTTAGCAGATGCTGGAGGTGTAGCAAGGGCAGGCTCT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169083129 55 - 170955103 AACAGTGGTGACAGAGTGTGTTAGTAGATGCTGG-GGTGGGCCAGGGGCAGGCTCT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163900084 55 + 165299245 CACAGTGGGGACAGAGCATGTTAGCAGATGCTGG-AGTGGGCCAGGGGCAGGTTCT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96687201 54 + 98384682 AACAGTGGTGACAGAGCGTGTTAGGAGGTGCTGG-GGTGTATC-GGGGCAGGCTCT i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169895352 0 + 171630274 C e canFam3.chr1 56173082 6728 + 122678785 I a score=116381.000000 s hg38.chr6_KB021644v2_alt 109762 56 + 185823 GTGAACAATGGTGATGGAGCGTGTTAGGAGGTGCT-GGGGTGTATT-GGGGCA-GCTCT s panTro4.chr6 170693988 54 + 172623881 GTGAACAGTGGTGAC--AGCATGTTAGGAGGTGCT-GGGGTGTATC-GGGGCA-GCTCT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172451856 58 + 174210431 GTGAACAGTGGTGACAGAGCATGTTAGGAGGTGCT-GGGGTGGGCCAGGGGCAGGCTCT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156307929 57 + 157873769 GTCAACAGTGGTGACAGAGCGTGTTAGGAGGTGCT-GGGGTGGGCC-GGGGCAGGCTCT i nomLeu3.chr3 T 57 T 57 s rheMac3.chr4 168129060 58 + 169853907 GTGAACAGTGGTGACAGAGCGTGTTAGGAGATGCTGGGGGTGTATT-GGGGCAGGCTCT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169083184 58 - 170955103 GTGAACAGTGGTGACAGAGCGTGTTAGGAGATGCTGGGGGTGTATT-GGGGCAGGCTCT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163900139 57 + 165299245 GTGAACAGTGGTGACAGAGTATGTTAGGAGGTACT-GGGGTGTATC-GGGGCAGGCTCT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96687255 57 + 98384682 GTGAACAGTGGTGACAGAGCGTGTTAGGAGGTGCT-GGGGGGTATC-GGGGCAGGCTCT i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169895352 0 + 171630274 C e canFam3.chr1 56173082 6728 + 122678785 I a score=71718.000000 s hg38.chr6_KB021644v2_alt 109818 48 + 185823 GTGAACAGTGGTGACGGAGCGTGTTAGGAGGTGCT-----------------------------------------------------------GGGGTGTATCGGG s panTro4.chr6 170694042 46 + 172623881 GTGAACAGTGGTGAC--AGCATGTTAGGAGGTGCT-----------------------------------------------------------GGGGTGTATCGGG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172451914 45 + 174210431 GTGAACAGTGGTGACAGAGCGTGTTAGGAGGTGCT-----------------------------------------------------------GGGGC---CGGGG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156307929 48 + 157873769 GTCAACAGTGGTGACAGAGCGTGTTAGGAGGTGCT-----------------------------------------------------------GGGGTGGGCCGGG i nomLeu3.chr3 T 57 C 0 s rheMac3.chr4 168129118 48 + 169853907 GTGGACAGTGGTGACAGAGTGTGTTAGTAGATGCT-----------------------------------------------------------GGGGTGTATTGGG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169083242 107 - 170955103 GTGGACAGTGGTGACAGAGTGTGTTAGCAGATGCTGGGGTGGGCCAGGGGCAGGTTCTGTGAACAGTGGGGACAGAGAGTGTTAGGAGATGCTGGGGGTGTATTGGG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163900196 48 + 165299245 GTGAACTGTGGGGACAGAGTGTGTTAGGAGGTGCT-----------------------------------------------------------GGGGTGGGCCAGG i papAnu2.chr4 C 0 I 120 s chlSab2.chr13 96687312 49 + 98384682 GTGAACAGTGGGGACAGAGTGTGTTAGTAGATGCT----------------------------------------------------------GGAGGTATACCACG i chlSab2.chr13 C 0 I 1 e calJac3.chr4 169895352 0 + 171630274 C e canFam3.chr1 56173082 6728 + 122678785 I a score=91499.000000 s hg38.chr6_KB021644v2_alt 109866 51 + 185823 GCA-GCTCTGTGAACAGTGGTG--ACAGCA--TGTTAGGAGGTGCTGG-GGTGTATC s panTro4.chr6 170694088 51 + 172623881 GCA-GCTCTGTGAACAGTGGTG--ACAGCA--TGTTAGGAGGTGCTGG-GGTGGACC i panTro4.chr6 C 0 I 2 s ponAbe2.chr6 172451959 50 + 174210431 GCAGGCTCTGTGAACAGTGGTG--ACAGAATGTGTTAGGAGGTGCTGG-GG----CC i ponAbe2.chr6 C 0 I 2 s nomLeu3.chr3 156307977 54 + 157873769 GCAGGCTCTGTGAACGGTGGTGACACAGCA--TGTTAGGAGGTGCTGG-GGTGGGCC i nomLeu3.chr3 C 0 I 2 s rheMac3.chr4 168129166 55 + 169853907 GCAGGCTCTGTGGACAGTGGTG--ACAGAGTGTGTTAGCAGATGCTGGAGGTGTAGC i rheMac3.chr4 C 0 I 2 s macFas5.chr4 169083349 55 - 170955103 GCAGGCTCTGTGAACAGTGGTG--ACAGATCATGTTAGGAGATGCTGGAGGTGTAGC i macFas5.chr4 C 0 I 2 s papAnu2.chr4 163900364 55 + 165299245 GCAGGCTCTGTGAACAGTGGTG--ACAGAGTGTGTTAGGAGGTGCTGAGGGTGTATC i papAnu2.chr4 I 120 T 174 s chlSab2.chr13 96687362 54 + 98384682 GCAGGCTCTGTGAACAGTGGTG--ACAGAGTGTGTTAGTAGATGCTGG-GGTGTATC i chlSab2.chr13 I 1 I 1 e calJac3.chr4 169895352 0 + 171630274 C e canFam3.chr1 56173082 6728 + 122678785 I a score=30815.000000 s hg38.chr6_KB021644v2_alt 109917 13 + 185823 GGGCA-GCTCTGTG s panTro4.chr6 170694141 13 + 172623881 GGGCA-GCTCTGTG i panTro4.chr6 I 2 C 0 s ponAbe2.chr6 172452011 14 + 174210431 GGGCAGGCTCTGTG i ponAbe2.chr6 I 2 C 0 s nomLeu3.chr3 156308033 14 + 157873769 GAGCAGGCTCTGTG i nomLeu3.chr3 I 2 T 115 s rheMac3.chr4 168129223 14 + 169853907 GGGCAGGCTCTGTG i rheMac3.chr4 I 2 C 0 s macFas5.chr4 169083406 14 - 170955103 GGGCAGGCTCTGTG i macFas5.chr4 I 2 C 0 s papAnu2.chr4 163900245 14 + 165299245 GGGCAGGCTCTGTG i papAnu2.chr4 T 174 C 0 s chlSab2.chr13 96687417 14 + 98384682 GGGCAGGCTCTGTG i chlSab2.chr13 I 1 C 0 e calJac3.chr4 169895352 0 + 171630274 C e canFam3.chr1 56173082 6728 + 122678785 I a score=96955.000000 s hg38.chr6_KB021644v2_alt 109930 54 + 185823 AACAATGGTGACGGAGCGTGTTAGGAGGTGCTGGGGTGT-ACCAGGGGCA-GCTCT s panTro4.chr6 170694154 54 + 172623881 AACAGTAGCGACGGAGCGTGTCAGGAGGTGCTGGGGTGT-ATCAGGGGCA-GCTCT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172452025 55 + 174210431 AACAGTGGTGACGGAGTGTGTTAGGAGATGCTGGGGTGG-GCCAGGGGCAGGCTCT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156307932 54 + 157873769 AACAGTGGTGACAGAGCGTGTTAGGAGGTGCTGGGGTGG-GCC-GGGGCAGGCTCT i nomLeu3.chr3 T 115 T 57 s rheMac3.chr4 168129237 56 + 169853907 AACAGTGGTGACAGAGCGTGTTAGGAGATGCTGGGGGAGTAGCAGGGGCAGGCTCT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169083420 55 - 170955103 AACAGTGGTGACAGAGTGTGTTAGTAGATGCTGGGGTGG-GCCAGGGGCAGGCTCT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163900259 56 + 165299245 AGGAGTGATGACAGAGAATGTTAGAAGGTGCTGGGGGTGTACCAGGAGCAGGCTCT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96687431 56 + 98384682 AACAGTGGGGACAGAGTGTGTTAGCAGATGCTGGAGGTGTAGCAGGGGCAGGCTCT i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169895352 0 + 171630274 C e canFam3.chr1 56173082 6728 + 122678785 I a score=112486.000000 s hg38.chr6_KB021644v2_alt 109984 59 + 185823 GTGAACAATGGTGATGGAGCGTGTTAGGAGGTGCTGGGG-TGTATT-GGGGCA-GCTCTGTG s panTro4.chr6 170694208 59 + 172623881 GTGAACAATGGTGATGGAGCGTGTTAGGAGGTGCTGGGG-TGGCCT-GGGGCA-GCTCTGTG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172452080 61 + 174210431 GTGAACAGTGGTGACAGAGTGTGTTAGGAGGTGCTGGGG-TGGGCCAGGGGCAGGCTCTGCG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156307929 60 + 157873769 GTCAACAGTGGTGACAGAGCGTGTTAGGAGGTGCTGGGG-TGGGCC-GGGGCAGGCTCTGTG i nomLeu3.chr3 T 57 T 57 s rheMac3.chr4 168129293 61 + 169853907 GTGAACAGTGGGGACAGAGAGTATTAGGAGATGCTGGGGGTGTATT-GGGGCAGGCTCTGTG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169083475 61 - 170955103 GTGAACAGTGGGGACAGAGAGTGTTAGGAGATGCTGGGGGTGTATT-GGGGCAGGCTCTGTG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163900315 61 + 165299245 GTGAACAGTAGTGACAGAGCATATTAGGAGATGCTGGGGGTGTATC-GGGGCAGGCTCTGTG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96687487 61 + 98384682 GTGAACAGTGGTGATAAAGCGTATTAGGAGGTGCTGGGGTGGGCCA-GGGGCAGGCTCTGTG i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169895352 0 + 171630274 C e canFam3.chr1 56173082 6728 + 122678785 I a score=94581.000000 s hg38.chr6_KB021644v2_alt 110043 57 + 185823 AACA-----------------------------------------------------------GTGGTGACGGAGCGTGTTAGGAGGTGCTG-GGGTGGGCCAGGGGCA-GCTCTGTG s panTro4.chr6 170694267 56 + 172623881 AACA-----------------------------------------------------------GTGGTGATGGAGCGTGTTAGGAGGTGCTG-GGGT-GGCCTGGGGCA-GCTCTGTG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172452141 58 + 174210431 AACA-----------------------------------------------------------GTGGTGACAGAACGTGTTAGGAGGTGCTG-GGGTGGGCCAGGGGCAGGCTCTGTG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156307932 57 + 157873769 AACA-----------------------------------------------------------GTGGTGACAGAGCGTGTTAGGAGGTGCTG-GGGTGGGCC-GGGGCAGGCTCTGTG i nomLeu3.chr3 T 57 C 0 s rheMac3.chr4 168129354 58 + 169853907 GACA-----------------------------------------------------------GTGGTGACAGAGCGTGTTAGGCAGTGCTGAGGGTGTATC-GGGGCAGGCTCTGTG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169083536 117 - 170955103 AACAGTGGTGACAGAGCGTGTTAGTAGATGCTGGAGGTGTAGCAGGGGCAGGCTCTGTGAACAGTGGTGACAGAGCGTGTTAGGCGGTGCTGAGGGTGTATC-GGGGCAGGCTCTGTG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163900376 59 + 165299245 AACA-----------------------------------------------------------GTGGTGACAGAGTGTGTTAGGAGGTGCTGAGGGTGTATCAGGGGCAGGCTCTGTG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96687548 59 + 98384682 AACA-----------------------------------------------------------GTGGTGACAAAGCGTGTTAGCAGATGCTGGAGGTGTAGCAGGGGCAGGCTCTGTG i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169895352 0 + 171630274 C e canFam3.chr1 56173082 6728 + 122678785 I a score=116760.000000 s hg38.chr6_KB021644v2_alt 110100 46 + 185823 AACAGTGGTGACGGAGCGTGTTAGGAGGTGCTGGGGTGGCCTGGGG s panTro4.chr6 170694323 46 + 172623881 AACAGTGGTGACGGAGCGTGTTAGGAGGTGCTGGGGTGGCCTGGGG i panTro4.chr6 C 0 M 2340 s ponAbe2.chr6 172452199 46 + 174210431 AATAGTGGTGACGGAGTGTGTTAGGAGATGCTGGGGTGGGCCAGGA i ponAbe2.chr6 C 0 I 1 s nomLeu3.chr3 156307989 46 + 157873769 AACGGTGGTGACACAGCATGTTAGGAGGTGCTGGGGTGGGCCAGGA i nomLeu3.chr3 C 0 I 1 s rheMac3.chr4 168129412 46 + 169853907 AACAGTGGTGATAAAGCATGTTAGGAGGTGCTGGGGTGGGCCAGGG i rheMac3.chr4 C 0 I 1 s macFas5.chr4 169083653 46 - 170955103 AACAGTGGTGATAAAGCATGTTAGGAGGTGCTGGGGTGGGCCAGGG i macFas5.chr4 C 0 I 1 s papAnu2.chr4 163900435 46 + 165299245 AACAGTGCTGATAAAGCATGTTAGGAGGTGCTGGGGTGGGCCAGGG i papAnu2.chr4 C 0 I 1 s chlSab2.chr13 96687607 46 + 98384682 AACAGTGGTGATAAAGCGTATTAGGAGGTGCTGGGGTGGGCCAGGG i chlSab2.chr13 C 0 I 1 s calJac3.chr4 169895352 33 + 171630274 AACAGTGGTGATGGAGTGTGTTAGGAGGTGCTG------------- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56173082 6728 + 122678785 I a score=448672.000000 s hg38.chr6_KB021644v2_alt 110146 229 + 185823 CAGGCTCTGTGCTGTCGACACTGGATCTTCCATCTGGGCAGGGCTCATTgtctcttgaagaaagtgacagctacagaggcttcaaggaagcaggagtgggccGT------------------GCAGATTGTATGAAAGCGCCCTGGCCATTAACACCTTTCACCGAAGCCCGACGGTGCAGTGCCACAAACCTCACTTCCTCTGAGCAACCCCAGGAGTCACATCGCCTGGGCTTGGATTCCCGGCA s ponAbe2.chr6 172452246 229 + 174210431 CAGGCTCTGTGCTGTTGACACTGGATCTTCCATCTGGGCAGTGCTCATTgtctcttggagaaagtgacagctacagaggcttcaaggaagcaggagtgggccgt------------------gcagatTGTATGAAAGCAACCCGGCCATTAACACCTTTCACTGAAGCCCAACGGTGCAGTGCCGTGAACCTCACTTCCTCTGAGCAACCCCAGGAGTCACGTCGCCTGGGCTTGGATTCCCCGCA i ponAbe2.chr6 I 1 C 0 s nomLeu3.chr3 156308036 229 + 157873769 CAGGCTCTGTGCTGTCAACACTGGATCTTCCATCTGGGTAGGGCTCATTGTCTCTTGGAGAAAGTGACAGCTGCAGAGGCTTCAAGGAAGCGTGACTGGGCTGT------------------GCAGATTGTGTGAAAGTGCCCCGGCCATTAGCACCTTTCCCCGAAGCCCGACGGTGCAGTGCCGCGAACCTCACTTCCCCTGAGCAACCCCAGGAGTCTCGTCGCCTGGGCTTGGATTCACCGCA i nomLeu3.chr3 I 1 C 0 s rheMac3.chr4 168129459 247 + 169853907 CAGGTTCTGTGCTGTTGACACTGGATCTTCCATCTGGGCAGGGCTCATTGTCTCGTCGAGAAAGTGACAGCTACAGAGGCTTCAAAGAAGAGGGAGTGAGCCGATTGTATGATCTACAACGTGCAGATGGTATGAAAGGGCCCCAGCCATTTACAACTTTCACCGAAGCCTGACGGTGTGGTCCTGCGAGCCTCAGTTCCTCTGAGAAACCCCAGGAGTCACGTTGCCTGGGCTTGGATTCATCTCA i rheMac3.chr4 I 1 C 0 s macFas5.chr4 169083700 247 - 170955103 CAGGTTCTGTGCTGTTGACACTGGATCTTCCATCTGGGCAGGGCTCATTGTCTCGTCGAGAAAGTGACAGCTACAGAGGCTTCAAAGAAGAGGGAGTGAGCCGATTGTATGATCTACAACGTGCAGATGGTATGAAAGGGCCCCAGCCATTTACAACTTTCACCGAAGCCTGACGGTGTGGTCCCGCGAGCCTCAGTTCCTCTGAGAAACCCCAGGAGTCACGTCGCCTGGGCTTGGATTCATCTCA i macFas5.chr4 I 1 C 0 s papAnu2.chr4 163900482 247 + 165299245 CAGGTTCTGTGCTGTTGACACTGGATCTTCCATCTGGGCAGGGCTCATTGTCTCGTCGAGAAAGTGACAGCTACAGAGGCTTCAAAGAAGAGGGAGTGAGCCGATTGTATGATCTACAATGTGCAGATGGTATGAAGGGGCCCCAGCCATTTACAACTTTCACCGAAGCCTGACAGTGTGGTCCTGCGAGCCTCAGTTCCTCTGAGAAACCCTAGGAGTCACGTCGCCTGGGCTTGGATTCATCTCA i papAnu2.chr4 I 1 C 0 s chlSab2.chr13 96687654 229 + 98384682 CAGGTTCTGTGCTGTTGACACTGGATCTTCCATCCGGGCAGGGCTCATTGTCTTGTCGAGAAAGTGACAGCTATGGAGGCTTCAAAGAAGAGGGAGTGAGCCGA------------------GCCAATTGTATGAAAGGGCCCCAGCCTTTAACAACTTTCACTGAAGCCTGACGGTGTGGTCCCGCAAACCTCAGTTCCTCTGAGAAACCCCAGGAGTCACGTCGCCTGGGCTTGGATTCATCTCA i chlSab2.chr13 I 1 C 0 s calJac3.chr4 169895385 213 + 171630274 --------------TCCACCCTGGAGCCTCCATCTAGGCAGGGCCCATTGTCTCATGGAGAAACTGACAGCTACAGAGGCTCCAGAGAAGAGAAAGAGAGCAT-------------------GCCGATTGTGGGAAAGCG-CCCAGCACTTAATAGCGTTCCCAGAAGCCCAGCGGTGGGGTGCTGTGAACCTCACTTTCTCTGAGAAACCCCAGGAGTCGTGTAATCCGGGCTTGGATTCCTCTCA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56173082 6728 + 122678785 I e panTro4.chr6 170694369 2340 + 172623881 M a score=2886307.000000 s hg38.chr6_KB021644v2_alt 110375 1048 + 185823 TCACACCTCCGAATGTCCTGGAATCACCTGTTCTGTCTGTGGTATTCAGGACCCTTCCCTGATGATTAAAGATGA---------ACTCCCCTAGAAGAACACACATCTACTGTGC--CTGTTAGACCTCCGTAGAAACCTGCAGCCTTTAGAGCTGTGTGATGTGTTCACACACGTGTGGTTGTGAGGGAC-ATCTCTCTTCACACGTGTGGATTGTACCATGGTCCGTGTTGGAATTCTCACAGGGAACAAACGAACCGTCAATTACCGAGGAAAGGTTTGCTGCGTGGGTAACTCGCCTCTGTGCA-GGAAGAACCCAGAAGCCCTGCTCCTGCTGAGGTTGTAACTGGACCTGTAGCTCCCCCGTGGTGCGGTGTGTGTGCGACAGTGTGGGGCGGTAAAGGCTACACGCGTGTGCTCGCGGAACTC-GGGACACAAGCTCCATGAGGCTCGCCGTGGATGGGAGCACGGGGCCAGGGCCCAGAGGAAAAATGGGGAGTTAGACAAGGAT--GGGGTGAATCCTGCAGATGCCAGGAGCTGGTCCTTTAGTGAGACTCTGAGGAAAGCTAAATAGGGCAGAAGCCTAGAAGAGACTCTGCAGGCGTGCCTGG--------------------------------------------GAGAGGACAGTCATAGACT--CTAAGTTA---------------------------CCAGAAGGGGATGCAGAGTTGAGGGAGTTGTGATTGTTGAAGTACCTCAGAGTACATTGAAAGGCAATTTTCATGACATGGTGTGCACTCAATACGGGATGGTTTTAAAGAGGGGAGAACCGTCTGCCAGGGGAGCTAAACGTCTGCTTTTTATAAGGAATCTGGCCGTGAGATGTTGGCCTGGGAACGACAGTGCAAGAGGACAGAGGGAGGCCTGGCGGGTGGAGGGCGCTGCCATCTTGGAGATAGAGGGCAGGTGTGATGAGCACAGCATGAGGCCTGTGGGCTCGAGTCGGGGCCTGAGACGGGGCCTCCTAGACACGGCATCACTGAGCGAGGGGAGTGGCTGGACAGGACAGTGACGAATTTCCTCTCAATGGTTCCGCAGCCTTTGCCTCGCCTCACCAGCGCCAGCCAATAAC s panTro4.chr6 170696796 1048 + 172623881 TCACACCTCCGAATGTCCTGGAATCACCTGTTCTGTCTGTGGTATTCAGGACCCTTCCGTGATGATTAAAGATGA---------ACTCCCCTAGAAGAACACACATCTACTGTGC--CTGTTAGACCTCCGTAGAAACCTGCAGCCTTTAGAGCTGTGTGATGTGTTCACACACGTGTGGTTGTGGGGGAC-GTCTCTCTTCACACGTGTGGATTGTACCATGGTCCGTGTTGGAATTCTCACAGGGAACAAACGAACCGTCAATTACAGAGGAAGGGTTTGCTGTGTGGGTAACTCGCCTCTGTGCA-GGAAGAACCCAGAAGCCCTGCTCCTGCTGAGGTTGTAACTGGACCTGTGGCTCCTCCGTGGTGCGGTGTGTGTGCGACAGTGTGGGGCGGTAAAGGCTACATGCGTGTGCTCGCGGAACTC-GGGACACAAGCTCCGTGAGGCTCGCCGTGGATGGGAGCACGGGGCCGGGGCCCAGAGGAAAAATGGGGAGTTAGACAAGGAT--GGGGTGAATCCTGTAGATGCCAGGAGCTGGTCCTTTAGTGAGACTCTGAGGAAAGCTAAATAGGGCAGAAGCCTAGAAGAGACTCTGCAGGCGTGCCTGG--------------------------------------------GAGAGGACAGTCATAGACT--CTAAGTAA---------------------------CCAGAAGGGGATGCAGAGTTGAGGGAGTTGTGATTGTTGAAGTACCTCAGAGTACATTGAAAGGCAATTTTCATGACATGGTATGCACTCAATACGGGATGGTTTTAAAGAGGGGAGAACCGTCTGCCAGGAGAGCTTAATGTCTGCTTTTTATAAGGAATCTGGCCGTGAGATGTTGGCCTGGGAACGACAGTGCAAGAGGACAGAGGGAGGCCTGGCGGGTGGAGGGCGCTGCCATCTTGGAGATAGAGGGCAGGTGTGATGAGCACAGCATGAGGCCTGTGGGCTCGAGTCGGGGCCTGAGACGGGGCCTCCTAGACACAGCATCACTGAGCGAGGGGAGTGGCTGGACAGGACAGTGACGAATTTCCTCTCAATGCTTCCGCAGCCTTTGCCTCGCCTCACCAGCGCCAGCCAATAAC i panTro4.chr6 M 2340 I 534 s ponAbe2.chr6 172452475 1046 + 174210431 TCACACCTCCGAATGTCCTGGAATCACCTGTTCTGTCTGTGGTATTCAGGACCCTTCCCTGATGATTAAAGATGA---------ACTCCCCTAGAAGAACGCACATCTACTGTGC--CTGTTAGACCTCCGTAGAAACCTCCAGCCTTTAGAGCTGTGTGATGTGTTCACACAC--GTGGTTGTGAGGGAC-GTCTCTCTTCACACATGTGGATTGTACCTTGGTCCGTGTTGGAATTCTCACAGGGAACAAATGAACGGTCAATTACCAAGGAAGGGTTTGCTGTGTGGGCAACTCGCCTCTGTGCA-GGAAGAACCCAGAAGCCCTGCTCCTGCTGAGGTTGTAACTGGACCTGTGGCTCC-CCATGGTGCGGTGTGTGTGCGACAGTGTGGGGCGGTAAAGGCTACACGCGTGTGCTCGCGGAACTCGGGGACACAAGCTCCATGAGGCTCACTGTGGATGGGAGCACAGGGCCGGGGCCCAGAGAAAAAATGGGGAGTTAGACAAGGATGGGGGGTGAATCCTGCAGATGCCAGGAGCTGGTCCTTTAGTGAGACTCTAAGGAAAGCTGAACAGGGCAGAAGGCTAGGAGAGACTCCGCAGGCGTGCCTGG--------------------------------------------GAGAGGACAGTCATAGACT--CTAAGTAA---------------------------CCAGAAGGGGATGCAGAGTTGAGGGAGTTGTGATTGTTGAAGTACCTCAGAGTACATTGAAAGGCAATTTTCATGACATTGTGTACACTCAATATGGGATAGTTTTAAAGAGGGGAGAACCGTCTGCCAGGGGAGCTAAACATCTGCTTTTTATAAGGAATCTGGCCGTGAGATGTTGGCCTGGGAACAGTAGTGCAAGAGGACAGAGGGAGGCCTGACGGGTGGAGGGCGCTGCCATCTTGGAGACAGAGGGCAGGTGTGATGAGCACAGCGTGAGGCCTGTGGGCTTGAGTCGGAGCCTGAGACGGGACCTCCTAGACACGGCATCACTGAGCGGGGGAAGTGGCTGGATAGGACAGTGACGAATTTC--CTCAGTGGTTCCGCAGCCTTTGCCTCGCCTCACCAGCGCCAGCCAATAAT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156308265 1093 + 157873769 TCACACCTCCGAATGTCCTGGAATCACCTGTTCTGTCTGTGGTATTCGGGACCCTTCCCTGGTGATTAAGGATGA---------ACTCCCCTAGAAGAACGCACATCTACTGTGC--CTGTCAGACCTCCGTAGAAACCTCCAGCCTTTAGAGCTGTGTGATGTGTTCACACACGTGTGGTTGTGAGGGAC-ATCTCTCTTCACACATGTGGATTGTACCATGGTCCGTGTTGGAATTCTCACAGGGAACAAACGAACGGTCAATTACCTAGGAAGGGTTTGCTGTGTGGGCAACTCACCTCGGTGCG-GGAGGAACCCAGAAGCCCTGATTCTGCTGGGGTTGTAACTGGACCTGTGGCTCCCCCGTGGTGCG--GTGTGTGCGACAGTGTGGGGAGGTAAAGGCTACATATGTGTGCTCGAGGAACTCAGGGACACAAGCTCCATGAGGCTCGCTGTGGACGGGAGCACGGGGCCAGGGCCCAGAGAAAAAACGAGGAGTTAGACAAGGATGGGGGGTGAATCCTGCAGATGCCAGGAGCTGGTCCTTTGGTGAGACTCTGAGGAAAGCTGAATAGGGCAGAAGCCTCGGAGAGACTCCACAGGCGTGCCCGGGAGAGGACAGTCACAGACTCTAAGTGACCCACAGGCGTGCCCGGGAGAGGACAGTCACAGACT--CTAAGTGA---------------------------CCAGAGGAGGATGCAGAGTTGAGGGAGTTGTGGTTGTTGAAGTACCTCAGAGTTCATGGAAAGGCAATTTTCATGACGTTGTGTGTACTCAATACGGGATGGTTTTAAAGAGGGGAGAACCGTCTGCCAGGTGAGCTAAACATCTGCTTTTTATAAGGAATCTGGCCATGAGATGTTGGCCTGGGAATGGCAGTGCAAGAGGACAGAGGGAGGCCTGATGGGTGGAGGGCACTGCAATCTTGGAGACAGAGGGCAGGTGTGATGAGCAGAGCGTGAGCCCTGTGGACTTGAGTCAGGGCCTGAGACGGGGCCTCCTAGACACGGCATCACTGAGCGGGGGGAGTGGCTGGACAGGACAGTGACGAATTTCCTCTCAATGGTTCCGCAGCCTTTGCCTCGCCTCACCAGCACCAGCCAATAAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168129706 1049 + 169853907 TCACATCTCCAAATGTCCTGGAATCACGTGCTCTGTCTGTGGTATTAAGGACCCTTCCCTGATGATTAAAGATGA---------ACCCCCCCAGGAGAACGCACACCTGCTGTGC--CTGCCAGACCTCCGTATAAACCTCCAGCCTGTAGAGCTGTGTGGTGTGTTCACACACGTGTGGTTGTGAGGGAC-GTCCCTCTTCACAGGTGCGGACTGTGCCACGGTCCGTGTTGCAGTTCTCACAGGGAACAAACAAACCGTCGATTACCTAGGAAGCGTTTGCTGTGTGGGCAACTCGTCTCGGTGCAGGGAAGAACCCGGAAACCCTGCTCCTGCTGAGGCTGTAACTGGACCTGTGGCTCCCCCGTGGTGTGGTGCATGTGCGACAGTGTGGGGTGGTAAAGGCTACACGCGTGTGCTCGTGGAACTCGGAGACACAAGCTCCATGAGGCTTGCCATGGATGGGAGCACGGAGCCGGGGCCCAGAGGAAAAATGGGGAGTTAGACAAGGAC-AGGGGTGAATCCTGCAGACGCCAGGAGCTGGTCCTTTGGTGAGACTCTTAGGAAAGCTGAATAGGGCAGAAGCTTAG--GAGACTCCACAGGCGTGCCTGG--------------------------------------------GAGAGGATAGTCATAGACT--CCAGGTAA---------------------------CCAGAGGGGGATGCCTAGTTGAGGGAATTGTGATTGTTGAAGTACCTCAGAGTATGCTGAAAGGCAATTTTCATGACATTGTGTGCACTCAATACGGGATGGTTTTAAAGAGGGGAGAACCGTCTGCCAGGTGAGCTAAACATCTGCTTTTTATAAGGAATCTGGCCGTGAGATGTTGGCCCGTGAACGGCAGTGCAAGAGGGCAGAGGAAGGCCTGGACGGTGGAGAGTGCTGCAATCTTGGAGACAGAGGGCAGGTGTGATGAGCACAGTGTGAGGCCTGTGGACTTCAGTCGGGGCCTGAGACAGGGCCTCCTAGACATGGCGTCACTGAGCGGGGAAAGTGGCTGGACAGGACAGTGACGAATTTCTGCTCAATGGTTCCACAGCCTTTGCCTCGCCTCACCAGCGCCAGTCAATAAT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169083947 1049 - 170955103 TCACATCTCCAAATGTCCTGGAATCACGTGCTCTGTCTGTGGTATTAAGGACCCTTCCCTGATGATTAAAGATGA---------ACTCCCCCAGGAGAACGCACACCTGCTGTGC--CTGCCAGACCTCCGTATAAACCTCCAGCCTGTAGAGCTGTGTGGTGTGTTCACACACGTGTGGTTGTGAGGGAC-GTCCCTCTTCACAGGTGCGGACTGTGCCATGGTCCGTGTTGCAGTTCTCACAGGGAACAAACGAACCGTCGATTACCTAGGAAGCGTTTGCTGTGTGGGCAACTCGTCTCGGTGCAGGGAAGAACCCGGAAACCCTGCTCCTGCTGAGGCTGTAACTGGACCTGTGGCTCCCCCGTGGTGTGGTGCATGTGCGACAGTGTGGGGTGGTAAAGGCTACACGCGTGTGCTCGTGGAACTCGGAGACACAAGCTCCATGAGGCTTGCCATGGATGGGAGCACGGAGCCGGGGCCCAGAGGAAAAATGGGGAGTTAGACAAGGAT-AGGGGTGAATCCTGCAGACGCCAGGAGCTGGTCCTTTGGTGAGACTCTTAGGAAAGCTGAATAGGGCAGAAGCTTAG--GAGACTCCACAGGCGTGCCTGG--------------------------------------------GAGAGGATAGTCATAGACT--CCAGGTAA---------------------------CCAGAGGGGGATGCCGAGTTGAGGGAATTGTGATTGTTGAAGTACCTCAGAGTATGCTGAAAGGCAATTTTCATGACATTGTGTGCACTCAATACGGGATGGTTTTAAAGAGGGGAGAACCGTCTGCCAGGTGAGCTAAACATCTGCTTTTTGTAAGGAATCTGGCCGTGAGATGTTGGCCCGTGAACGGCAGTGCAAGAGGGCAGAGGAAGGCCTGGACGGTGGAGAGTGCTGCAATCTTGGAGACAGAGGGCAGGTGTGATGAGCACAGTGTGAGGCCTGTGGACTTCAGTCGGGGCCTGAGACAGGGCCTCCTAGACACGGCGTCACTGAGCGGGGAAAGTGGCTGGACAGGACAGTGACGAATTTCCGATCAATGGTTCCACAGCCTTTGCCTCGCCTCACCAGCGCCAGTCAATAAT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163900729 1047 + 165299245 TCACATCTCCAAATGTCCTGGAATCACCTGCTCTGTCTGTGGTATTAAGGATCTTTCCCTGATGATTAAAGATGA---------ACTTCCCCAGAGGAACGCACATCTGCTGTGC--CTGTCAGACCTCCTTATAAACTTCCAGCCTGTAGAGCTGTGTGGTGTGTTCACACACGTGTGGTTGTGAAGGAC-CTCCCTCTTCACATGTGCGGATTGTGCCACGGTCCGTGTTGCAGTTCTCACAGGGAACAAACGAACCGTCAATTACCCAGGAAGC--TTGCTGTGTGGGCAACTCGTCTCGGTGCAGGGAAGAATCCAGAAACCCTGCTCCTGCTGAGGCTGTAACTGGACCTGTGGCTCCCCCGTGGTGTGGTGCATGTGCGACAGTGTGGGGTGGTAAAGGCTACACGCGTGTGCTCGTGGAACTCGGGGACACAAGCTCCATGAGGCTTGCCATGGATGGGAGCACGGAGCCGGGGCCCAGAGGAAAAATGGGGAGTTAGACAAGGAT-AGGGGTGAATCCTGCAGACGCCAGGAGCTGGTCCTTTGATGAGACCCTTAGGAAAGCTGGATAGGGCAGAAGCTTAG--GAGACTCCACAGGCGTGCCTGG--------------------------------------------GAGAGGATAGTCATAGACT--CCAGGTAA---------------------------CCAGAGGGGGATGCTGAGTTGAGGGAATTGTGATTGTTGAAGTACCTCAGAGTATGCTGAAAGGCAATTTTCATGACATTGTGTGCACTTAATACGGGATGGTTTTAAAGAGGGGAGAACCGTCTGCCAGGTGAGCTAAACATCTGCTTTTTGTAAGGAATCTGGCCGTGAGATGTTGGCCCGGGAACAGCAGTGCAAGAGGGCAGAGGAAGGCCTGGACAGTGGAGGGTGCTGCAATCTTGGAAACAGAGGGCAGGTGTGATGAGCACAGCGTGAGGCCTGTGGGCTTCAGTCGGGGCCTGAGACAGGGCCTCCTAGACACGGCATCACTGAGCGGGGAAAGTGGCTGGACAGGACAGTGACGAATTTCTGCTCAATGGTTCCACAGCCTTTGCCTCGCCTCACCAGCGCCAGTCAATAAT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96687883 1049 + 98384682 TCACATCTCCAAATGTCCTGGAATCACCTGCTCTGTCTGTGGTATTAAGGACCCTTCCCTGATGATTAAAGATGA---------ACTTCCCCAGAAGAACGCACATCTGCTGTGC--CTGTCAGACCTCCGTATAAACCGCCAGCCTGTAGAGCTGTGTGGTGTGTTCACACACGTGTGGTTGTGAGGGAC-GTCCCACTTCACAGGTGTGGACTGTGCCACAGTCCGTGTTGCAGTTCTCACAGGGAACAAACGAACTGTCAATTACCTAGGAAGCGTTTGCTGTGTGGGCAACTCGTCTCGGTGCAGGGAAGAACCCAGAAGCCCTGCTCCTGCTGAGGCTGTAACTGGACCTGTGGCTCCCCCGTAGTTTGGTGCATGTGCGACAGCGTGGGGTGGTAAAGGTTACATGCGTGTGCTCGTGGAACTCAGGGACACAAGCTTCATGAGGCTTGCCCTGGATGGGAGCACGGAGCCATGGCCCAGAGGAAAAATGGGGAGTTAGACAAGGAT-AGGGGTGAATCCTGCAGACGCCAGGAGCTGCTCCTTTGGTGAGACTCTTAGGAAAGCTGAATAGGGCAGAAGCTTAG--GAGACTCCACAGGCCTGCCTGG--------------------------------------------GAGAGGATAGTCATAGACT--CCAGGTAA---------------------------CCAGAGGGGGATGCCGAGTTGAGGAAGTTGTGATTGTTGAAGTACCTCAGAGTATGCTGAAAGGCAATTTTCATGACATTGTGTGCACCCAACACAGGATGGTTTTAAAGAGGGGAGAACCGACTGCCAGGTGAGCTAAACATCTGCTTTTTGTAAGGAATCTGGCCGTGAGATGTTGGCCCAGGAACGGCAGTGCAAGAGGGCAGAGGAAGGCCTGGACGGTGGAGGGTGCTGCAATCTTGGAGACAGAGGGCAGGTGTGATGAGCGCAGCGTGAGGCCTGTGGGCTTCAGTCGGGGCCTGAGACAGGGCCTCCTAGACACGGCATCACTGAGCAGGGGAAGTGGCTGGACAGGACAGTGACGAATTTCCGCTCAATGGTTCCACAGCCTTTGCCTCGCCTCACCAGCGCCAGCCAATAAT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169895598 1038 + 171630274 CCATATCTACCAATGTCCTGGGATTACCTGTTCTGTCTGTGGTATTCAGGACCCTTCCCTGATGATAGAAGATGAGTCTGCACCGCTGCCCCAGAAGAATGCACGTGTCCTGTGCTGCTGTTAGACCTCCGTGTAAACCTCCAGCTGGTGGAGCTGTGCAGCTTACTCACACGTGTGTGGGT-TGAGGGACGGTCCCTCTTCACACGTGTGGATCGTACCACGGTCCCTGTTGGAATTCTCATGGGAAACA----AACCGTCAATTACCTGGGAAGGGTCTGCTGTATGGGCAACTTGCCTTTGTGCAGAGAAGCACCCGGAAGCCCTGCTCCTGCTGAGATTGTAACTGGACCCGTGTCTCCCCTGTGGTGCCATG--TGTGTGACAGTGTGGAGTGGTGAAGGCTACATGCGTGTGTCCACAGAACTCAGGGACACACACTCCATGAGGCTCGCTACAGACGGGAGCACGGGGCCGGGCCCATAGGAAAAAATGAGGAGTCAGACGAGGATGAGGAGTGAATCCTGCAGATGCCAGGAGCAGGTCCTTTGGGGAGACTCTGAGGAAAGCTGAGTAGGGC---AGTTTAGGGGAGATTCCACAGGCATGTGTG---------------------------------------------GAGAGGATAGTCACTGAGTGGCCATGTAAGTACATTTCCCGCTCAGTGGCTCTGAGCGGGAGGGGGATGCAGACTGGAGAGCACCGTGATTGTTGAAGTCCCTCAGAGGATGCTGAAAGGCAATTTCCACGACATCATGTGCACTCAATACGGGATGG-TTTAAAGAGGGCAGAACCACCTGTCCTGTGAGCTAAACCTCTACTTATTGGAAGAAAGCTGACTGTGAGATGGTGGCCCAGGAATGGCAGTGCAGGAGGAAAGAGGGAAGCCTGGAGGGTGGAGGGCACTGCCATCTTGGAG-----GGGCAGTTGCAATGAGCACAGTGTGAGGTCCATGGGCTTGAGGCAGGCCCTGAGATGGGGCCTCCTAGACACGGCATCTCTGGGGTGGGG-----------------AGTGACAGATTTCCTCCCGA---------------------GATTCAGCAGCACTGATCAATAAT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56173082 6728 + 122678785 I a score=650196.000000 s hg38.chr6_KB021644v2_alt 111423 239 + 185823 TGCTCCTCAAGGGGCAGACAGGCTTTGCCATGCTGAACAAGCAGAAACTTCCCCTCCGAGATGCCCAGAAGTTTTCACCTGCCCAGGGTGTTGCCTGGGGATAATGAGTTCACAAAATGCTCTCTTTACAAAAAGCACTGGGCTTGCCTGGAGGGGACAGCTACAGACTGACCCCTGTGGCTGGATAGC-CCCTTAAGTGTGAAATAAGTAACTTAAGATA---AGATTCTCCATAGTAAGGA s panTro4.chr6 170698378 239 + 172623881 TGCTCCTCAAGGGGCAGACAGGCTTTGCCACGCTGAACAAGCAGAAACTTCCCCTCCGAGATGCCCAGAAGTTTTCACCTGCCCAGGGTGTTGCCTGGGGATAATGAGTTCACAAAATGCTCTCTTTACAAAAAGCACTGGGCTTGCCTGGAGGGGACAGCTACAGACTGACCCCTGTGGCTGGATAGC-CCCTTAAGTGTGAAATAAGTAACTTAAGATA---AGATTCTCGATAGTAATGA i panTro4.chr6 I 534 C 0 s ponAbe2.chr6 172453521 234 + 174210431 TGCTCCTCAAGGGGCAGATAGGCTTTGCCACGCTGAACAAGCAGAAACTTCCCCTCCAAGATGCCCAGAAGTTTTCACCTGCCCAGGGTGTTGCCTGGGGATAACGAGTTCACAAAATGCTCTCTTTACAAAAAGCACAGGGCTTGCCTGGAGGGGACAGCTACAGACTGACCCCTGTGGCTGGATAGC-CCCCTAAGTGTGAAATAAGTAACT-----TA---AGATTCTTGGTAGTAATGA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156309358 239 + 157873769 TGCTCCTCAAGGGGCAGACAGGCTTTGCCACGCTGAACAAGCAGAAACTTACCCTCCGAGATGCCCAGAAGTTTTCACCTGCCCAGGGTGTTGCCTGGGGATAATGAGTTCACAAAATGCTCTCTTTACAAAAAGCACTGGGCTTGCCTGGAGGGGACAGCTACAGACTGACCCTTGTGGCTGGATAGC-CCCGTAAGTGTAAAATAAGTTACTTGAGATA---AGATTCTCGGTAGTAATGA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168130755 240 + 169853907 CGCTCCTTAAGTGGCAGACAGGCTTTGCCACGCTGAACAAGCAGAAATTTCCCCTCTGAGACGCCCAGAAGCTTCTACCTGCCCAGGGTGTTGCCTGGGGATAACGAGTTCACAAAATGCTCTCTTCACAAAAAGCACTGCGCTTGCCTGGAGGGGACAGCTACAGACTGACCCCTGTGGCTGGATAGCACTGTTAAGTGTGAAACAAGTTACTTAAGATA---CAATTGTTGGTAGTAATGA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169084996 240 - 170955103 CGCTCCTTAAGTGGCAGACAGGCTTTGCCACGCTGAACAAGCAGAAATTTCCCCTCTGAGACGCCCAGAAGCTTCTACCTGCCCAGGGTGTTGCCTGGGGATAACGAGTTCACAAAATGCTCTCTTCACAAAAAGCACTGAGCTTGCCTGGGGGGGACAGCTACAGACTGACCCCTGTGGCTGGATAGCACCCTTAAGTGTGAAACAAGTTACTTAAGATA---CAATTGTTGGTAGTAATGA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163901776 240 + 165299245 CACTCCTTAAGTGGCAGACAGGCTTTGCCACGCTGAACTAGCAGAAATTTCCCCTCTGAGACGCCCAGAAGCTTCCACCTGCCCAGGGTGTTGCCTGGGGATAACGAGTTCACAAAATGCTCTCTTCACAAAAAGCACTGGGCTTGCCTGGAGGGGACAGCTACAGACTGACCCCTGTGGCTGGATAGCACCCTTAAGTGTGAAATAAGTTACTTAAGATA---CAATCGTTGgtagtaatga i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96688932 240 + 98384682 CGCTCCTCAAGTGGCAGACAGGCTTTGCCACGCTGAACAAGCAGAAACTTCCCCTCTGAGACGCCCAGAAGCTTCCACCTGCCCAGGGTGTTGCCTGGGGATAACGAGGTCACAAAATGCTCTCTTCACAAAAAGCACTACGCTTGCCTGGAGGGGACAGCTACAGACTGACCCCTGTGGCTGGATAGCACCGTTAAGTGTGAAATAAGTTACCTAAGATA---CAATCGTTGGTAGTAATGA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169896636 227 + 171630274 CACTCCTTAA--AGCAGATGGGCTTTG-CACACTGAACAAGCAGAAACTTCCCCT--GAGATGCCCAG--------ACCCACCCAGTGTGTTGCCTGTGGATAGTGAGTTCACAACACGTTCTCTTTACAAAGAACAGTGGCCCCACCTTGGGAGGACTGCTACAGACT-CCCCCTGTGGCTGGATAGC-GCCCTAAGTGTG-AATAAGTTACTCATGATAAATAAGGTCTTGGTAGTAATGA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56173082 6728 + 122678785 I a score=1785916.000000 s hg38.chr6_KB021644v2_alt 111662 603 + 185823 AATAATCTACCAACTTTTCTTTCTGAGAAAATATACCTAACTGGGTGGGAACTC----GACATCATGCCTTAACTGGAATTTTTT-CCCCGTACATCCAAATG--TATTCTTGAGAGCTTAGGAACTAAGTCATCTCCAAAGGGACTGACACGGAGCAAACCATGGTGATGATCGCTGCATTCGTTATCTCTGAACGTCTCCACGCACCTCATTCTGCTCAGCCTCTTGCTGGACGTGGAGGGGCTTGGCTTTGCTCTCCAGCACTGCGGGGGTCGTGGGCA-CTGGGAAGTCTCTGCCAGGCAGCCTGTGGACGTGCAG-CTGGCAGAGTCAATTGGATCCGTGAGCTCACAGGAGACCGGCCCCTCCAGGTACATGCCATCTGAAAAC--AACC-TTTTAAGGGCAGGCGGT-GGCTGAGTCATTGGTACTCAGCCAAGGAGAATGTGTCCCCACAGCTGTGGCAC--AGCCTCGCTCTGGGCTCACT---CTGTGATATGATGCTGGCTGTGTTCTGTGGAAAGCAACGGTCCCATAAACCATAACTGCTAAGGGCTCTGCCACAGGCCAGCATAAGACATGGGCTGAATGTGCAGTC---------TGAGAGTGGAGGGAGCAGAT s panTro4.chr6 170698617 603 + 172623881 AATAATCTACCAACTTTTCTTTCTGAGAAAATATACCTAACTGGGTGGGAACTC----GACATCATGCCTTAACTGGAATTTTTT-CCCCGTACATCCAAATG--TATTCTTGAGAGCTTAGGAACTAAGTCATCTCCAAAGGGACTGACACGGAGCAAAACATGGTGATGATCGCTGCATTCGTTATCTCTGAACGTCTCCACGCACCTCATTCTGCTCAGCCTCTTGCTGGACGTGGAGGGGCTTGGCTTTGCTCTCCAGCACTGCTGGGGTCGTGGGCA-CTGGGAAGTCTCTGCCAGGCAGCCTGTGGACGTGCAG-CTGGCAGAGTCAATTGGATCCGTGAGCTCACAGGAGACCGGCCCCTCCAGGTACATGCCATCTGAAAAC--AACC-TTTTAAGGGCAGGCGGT-GGCTGAGTCATTGGTACTCAGCCAAGGAGAATGTGTCCCCACAGCTGTGGCAC--AGCCTCGCTCTGGGCTCACT---CTGTGATATGATGCTGGCTGTGTTCTGTGGAAAGCAACGGTCCCATAAACCATAACTGCTAAGGGCTCTGCCACAGGCCAGCATAAGACATGGGCTGGATGCACAGTC---------TGAGAGTGGAGGGAGCAGAT i panTro4.chr6 C 0 I 271 s ponAbe2.chr6 172453755 600 + 174210431 AATAATCTACCAACTTTTCTTTCTGAGAAATTATACCTAACTGGGTGGGAACTC----GACATCGTGCCTTAACTGGAATTTTTT-CCCTGTACATCCAAATG--TATTTTTGAGCACTTAGGAACTAAGTCGTCTCCAAAGGGACTGACAGGGAGCAAACCATGGTGATGACCTCTGCATTCTTTATCTCTGAACGTCTCCATGCACCTCATTCTGCTCAGCCTCTTTCTGGGTGTGCAGGGGCTTGGCTTTGCTCTCCAGCACTGCTGGGGTCGTGGGCA-CTGGGAAG--TCTGCCAGGCAGCCTGTGGACATGCAG-CTGGCAGAGTCAATTGGATCCGTGAGCTCACAGGAGACCGGCCCCTCCAGGTACGTGCCATCTGAAAAC--AACC-TTTTAAGGGCAGGCAGT-GGCTGAGTCATTGGTACTCAGCCAAGGAGAATGTGCCCCCACAACTGTGGCAC--GGCCTCGCTCTGGGCTAGCT---CTATGATATGATGCCGGCCGTGTTCTGTGGAAAGCAACGGTCCCATAAACCATAACTG-GAAGGGCTCTGCCACGGGCTGGCATAAGACATGGGCTGGATGCGCAGTC---------TGGGAGTGGAGGGAGCAGAC i ponAbe2.chr6 C 0 I 68 s nomLeu3.chr3 156309597 596 + 157873769 CATAATCTACCAACTTTTCTTTCTGAGAAAATATACTTAACCGGGTGGGCACTC----GACATCATGCCTTAACCGGATTTTTTT-CCCTGTACGTCCAAATG--TGTTTTTGAGAGCTTAGGAACTAAGTCGTCTCCAAAGGGACTGACGGGGAGCAAAGCATTGTGATGGTCTCTGCATTCTTTATCTCTGAGCATCTCCACGCACCTCATTCTGCTCAGCCTCTTGCTGGCCGTGGAGGGG-TTGGCTTTGCTCTCCAGCACTGCT-GGGTCGTGGGCA-CTGGGAAG--TCTGCCAGGCAGCCTGTGGACATGTAG-CTGGCAGAGTCAATTGGATCCGTGAGCTCACAGGAGACCGGCCCCTCCAGGTACATGCCA-CTGAAAAC--AACC-TTTTAAGGGCAGGCGGT-GGCTGAGTTGTTGGTACTCAGCCAAGGAGAATGTGTCCCCACAGCTGTGGCAT--GGCCTCGCTCTGGGCTCACT---CTGTGGTATGATGCCGGCCATGTTCTGTGGAAAGCATCAGTCCCATAAACCATAACTGCTAAGGGCTCTGCCACGGGCCGGCATAAGAC--GGGCTGGATGCACAGTC---------TGGGAGAGGAGGGAGCAGAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168130995 591 + 169853907 AATAATCTGCCGACTTTTCTTTCTGAGAAAATACACCTAACTGGGTGGGAACTC----GACATCACACCTTAAGTGGAATTTTTT-CCCTGTACATCCACATG--TATTTTTGAGAGCTTAGGAACTAAGTTGTCTCCAAAGGGACTGACATGCAGCAAACCATTGTGATGATCTCTGCGTTCTTTATCTCTGAACGTCTCCGTGCACCTCATTCTGCTCAGCCTCTTGCTGGACGTGGAGCGGCTTGGCTTTGCTCTCCAGCACGGCTGCGGTCGTGGGCG-CTGGGAAGTCTCTGCCAGGCAGGCTGTGGACGTGCAG-CTGGCAGAGTCAGTTGGATCCGTGAGATCACAGGAGACTGGCCCCTCCAGGTACATGCCATCTGAAAGCAGAACCTTTTTAAGGGCGGGCAGT-GGCTGAGTTGTTGGTACTCAGCCAAGGAGAGTATGTCCCCACAGCTGTGGCAC--GGCCTCGCTCTGGGCTCACT---CTATGGCATGACGCCGGCCCTGTTCTGTGGA---------------AAACCATAACTGCTCAGGGCTCTGCCACGGGCCAGCATAAGGCATGGGCTGGATGCACAGTC---------TGGGAGTGGAGGGAGCGGAC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169085236 591 - 170955103 AATAATCTGCCGACTTTTCTTTCTGAGAAAATACACCTAACTGGGTGGGAACTC----GACATCACACCTTAAGTGGAATTTTTT-CCCTGTACATCCAAATG--TATTTTTGAGAGCTTAGGAACTAAGTTGTCTCCAAAGGGACTGACATGGAGCAAACCATTGTGATGATCTCTGCGTTCTTTATCTCTGAACGTCTCCGTGCACCTCATTCTGCTCAGCCTCTTGCTGGCCGTGGAGGGGCTTGGCTTTGCTCTCCAGCACGGCTGGGGTCGTGGGCG-CTGGGAAGTCTCTGCCAGGCAGGCTGTGGACGTGCAG-CTGGCAGAGTCAGTTGGACCCGTGAGATCACAGGAGACTGGCCCCTCCAGGTACATGCCATCTGAAAGCAGAACCTTTTTAAGGGCGGGCAGT-GGCTGAGTTGTTGGTACTCAGCCAAGGAGAGTATGTCCCCACAGCTGTGGCAC--GGCCTCGCTCTGGGCTCACT---CTGTGGCATGATGCCGGCCCTGTTCTGTGGA---------------AAACCATAACTGCTCAGGGCTCTGCCACGGGCCAGCATAAGGCATGGGCTGGATGCACAGTC---------TGGGAGTGGAGGGAGCGGAC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163902016 590 + 165299245 aataatctgctgacttttctttctgagaaaatacgcCTAACTGGGTGGGAACTC----GACATCACACCTTAAGTGGAATTTTTT-CCCTGTACATCCAAATG--TATTTTTGAGAGCTTAAGAACTAAGTTGTCTCCAAAGGGACTGACATGGAGCAAACCATTGTGATGATCTCTGCGTTCTTTATCTCTGAACATCTCCGTGCACCTCATTCTGCTCAGCCTCTTGCTGGACGTGGAGGGGCTTGACTTTGCTCTGCTGCACGGCTGGGGTTGTGGGCG-CTGGGAAGTCTCTGCCAGGCAGGCTGTGGACGTGCAG-CTGGCAGAGTCAGTTGGATCCGTGAGCGCACAGGAGACTGGCCCCTCCAGGTACATGCCATCTGAAAACAGAACC-TTTTAAAGGCGGGCAGT-GGCTGAGTTGTTGGTACTCAGCCAAGGAGAGTGTGTCCCCACAGCTGTGGCAT--GGCCTTGCTCTGGGCTCACT---CTATGGCATGACGCCAGCCCTGTTCTGTGGA---------------AAACCATAACTGCTCAGGGCTCTGCCACGGGCCAGCATAAGGCATGGGCTGGATGCACAGTC---------TGGGAGTGGAGGGACCGGAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96689172 589 + 98384682 AATAATCTGCCGACTTTTCTTTCTGAGAAAATATACCTAACTGGGTGGGAACTC----GACATCATACCTTAAGTGGAATTTTTTCCCCTGTACATCCACATG--TATTTTTGAGAGCTTAGGAACTAAGTTGTCTCCAAAGGGACTGACATGGAGCAAACCATTGTGATGATCTCTGTGTTCTTTATCTCTGAACGTCTCCGTGCGCCTCATTCTGCTCAGCCTCTTGCTGGACGTGGAGGGGCTTGGCTTTGCTCTCCAGCATGGCT--GGTCATGGGCA-CTGGGAAGTCTCTGCCAGGCAGGCTGTGGACGTGCAG-CTGGCAGAGTCAGTTGGATCCGTGAGCGCACAGGAGACTGGCCCCTCCAGGTACATGCCATCTGAAAACGGAACC-TTTTAAGGGCGGGCAGT-GGCTGAGTTGTTGGTACTCAGCCAAGGAGAGTATGTCCCCACAGCTGTGGCAT--GGCCTCGCTCTGGGCTCACT---CTATGGCATGACGCTGGCCCTGTTCTGTGGA---------------AAACCATAACTGCTCAGGGCTCTGCCACGGCCCAGCATAAGGCATGGGCTGGATGCACAGTC---------TGGGAGTGGAGGGAGCAGAC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169896863 589 + 171630274 AATAATCTGCCAACT----TTTCTGAGAAAATTTAC----CTGAGTGGAAACTC----CAGACGACACCTTAACCTGAATTTTTT-TCCTGTACATCCAAATG--TATTTTTGAGAGCATAGGAACTAAGTCGTCTCCGAAGGGACTGACGCGGAGCAAGCCATTGTGACAATCTCCGCATTCTCTACCTCTGAATGTCTCCATGCATCTCATTCCGCCCAGCCTCTTGCTGAACGTGGGGG---TTGGCT----TCTCTGGCACTGCTGGGGCCATGGGCG-CTGGGAAGTCGTTGCCAGGCAGACTACGGATGTACAG-CTGGCAGAATCCATTGGATCAGTGAGCTCACAGGAGGCTGGCCCCTCCAGGTACATGCCGGCT-AAAACAGAAAC-TTTTAAGGGCAGGCAGT-GGATGAGTTGTTGGTAGTTGGCCAAGGAGAATGTGTCCCCACAGCTGTGGCAC--GGCCTTGCTCTGGGCTCACT---CTGTTATATGATGCTGGCCAGGTTCTGTGGGAAGCAGCAGTCCTATAAACCATCACTGCTAATGGCTCCGCCACTGGCCAGCATAAGACCTGGGCTGGATGCACAGTC---------CGGGAGTGGAGGGACCAGAC i calJac3.chr4 C 0 C 0 s canFam3.chr1 56179810 604 + 122678785 AATAAGGCTTCATCCTGTCTCTCTGAGAAAATTTACCCAGCTGCATAGGAACTTATTAAAGATTATGCCTCACCCCAAATTTCCC-CCTGATAGATAAAAATGCCTATTTTTGAAAGTTTAGCAGCAAAATCACTTCCATAGCCGCTTAAGTAGAAATGACACATTTTAAAGTCATTATGCT-TTGATCTTGGAAGCTTTCCAC-TGCTCAGCTTTGTTCAGCTTTTGGTTGGGCTTGGGAGGCTCTGG----------TAGCACT-------TTGTGTCTGCCTGGGAAGTCCCTGCCAGCCCGTGTTCAGCAGTGCAGACTCCAAGAATCAACTGAATCAGTGAAGTGGTAAGACACTGACCACTCCAGATGCACTCCATCTGAAAGA-GAAAC-TTTCAAAGGCAGATGGCAGGCTGAGTTGCTGGTAGTTGGCCAAGGAGAACGTGTTCCGACAGCTATAGTCCCAGGCCTCCCTCTGGGCTCGCTTTCTTATTATAAGATACTTTCCATGTTCTGTGAAATATGCTGATCCTATAAAGTGTAATTGCTAAAGGCCCCACAATGGGTGAAAATACGGCATGGGCTGGA--CTCAGTCCAGGAACCATGAGAGAGTGAGGAGCAG-- i canFam3.chr1 I 6728 C 0 a score=723047.000000 s hg38.chr6_KB021644v2_alt 112265 262 + 185823 GGTGAACTGGGAGGAGCCCTGTCAGGCCGCACAGTGAGCGAAGCACTGCTGAGCTGTGAGTGCCCGACGTAGTAAACCGTAAGGCGAAGCCACCTTGGACTAAAGGAAATGTC--CACACCCAGCTTGGGGTGGAGTTGCAAACCTCTCCACTAAGCTGCAAACTCAGCTGTGTGACAAATA----AAACTGACACAGCACTTAGACAGTGTTTCTCTTTCAGGAAGGATTTTATTTCCAGTACAATCGAGAAGGAACACTGTA----TCTC s panTro4.chr6 170699491 261 + 172623881 GGTGAACTGGGAGGAGCCCTGTCAGGCCTCACAGTGAGTGAAGCACTGCTGAGCTGTGAGTGCCCGACGTAGTAAACCGTAAGGCAAAGCCACCTTGGACTGAAGGAAATGTC--CACACCCAGCTTGGGGTGGAGTTGCAAACCTCTCCACTAAGCTGCAAACTCA-CTGTGTGACAAATA----AAACTGACACAGCACTTAGACAGTGTTTCTCTTTCAGGAAGGATTTTATTTCCAGTACAATTGAGAAGGAACACTGTA----TCTC i panTro4.chr6 I 271 C 0 s ponAbe2.chr6 172454423 261 + 174210431 AGCGAACGGGGAGGAACCCTGTCAGGCCGCACAGTGAGCAAAGCACTGCTGAGCTGTGAGTGCCCGACGTAGTAAACTGTAAGGCAGAGCCACCTTGGACTAAAGGAAACGTC--CACACCCAGCTTGGGGTGGAGTTGCAAACCTCTCCACTAAGCTGCAAACTCG-CTGTGTGACAAATC----AAACTGACACAGCACTTAGACAGTGTTTCTCTTTCAGAAAGGATTTTATTTCCAGAACAATTGAGAAGGAACATTGTA----TCTC i ponAbe2.chr6 I 68 C 0 s nomLeu3.chr3 156310193 259 + 157873769 GGTGAATGGGGAGGAGCCCTGTCGGCTGGCACAGT--GCAAAGCACTGCTGAGCTGTGAGCGCCCGACATAGGTAACCATAAGCCAAAGTCACCTCCGACTAAAGGAAACGTC--CACACCCAGCTTGGGGTGGACTTGCAAACCTCTCCACTAAGCTGCAAACTCG-CTGTGTGACAAATA----AAACTGACACAGCACTTAGACAGTGTTTCTCTTTCAGAAAGGATTTTATTTCCAGTACAATTGAGAAGGAACATTGTA----TCTC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168131586 263 + 169853907 GGCGAACCGGGAGGAACCT--GCGGCCTGCACGGTGAGCGAAGCACTGCCCAGCTGTGAGTGGCCGACGCAGGTAACCATAAGCCAAAGCTGCCTCGGACTAAAGGAAACGTC--CACACCTAGCTTGGGGTGGAGTCACAAACCTCTGCACTAAACTGAAAACCCG-CTCTGTGACAAATA----AAACTAACACAGTACTTAGACAGTGTTTCTCTTTCAGAAAGGATTCTATTTCCAGTACAATTGAGGAGGAACATTGTATCTCTCTC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169085827 263 - 170955103 GGCGAACCGGGAGGAACCT--GCGGCCTGCACGGTGAGCGAAGCACTGCCCAGCTGTGAGTGGCCGACGCAGGTAACCATAAGCCAAAGCTGCCTCGGACTAAAGGAAACGTC--CACACCTAGCTTGGGGTGGAGTCACAAACCTCTGCACTAAACTGAAAACCCG-CTCTGTGACAAATA----AAACTAACACAGTACTTAGACAGTGTTTCTCTTTCAGAAAGGATTCTATTTCCAGTACAACTGAGGAGGAACATTGTATCTCTCTC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163902606 259 + 165299245 GGCGAACCGGGAGGAACCT--GCGGCCTGCACGGTGAGCGAAGCACTGCCCAGCTGTGAGTGGCCAACGCAGGTAACCATAAGCCAAAGCTGCCTCGGACTAAAGGAAACGTC--CACACCTAGCTTGGGGTGGAGTCCCAAACCTCTGCACTAAACTGAAAACCTG-CTCTGTGACAAATA----AAACTAACACAGTACTTAGACAGTGTTTCTCTTTCAGAAAGGATTCTATTTCCAGTACAACTGAGGAGGAACATTGTA----TCTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96689761 263 + 98384682 GGCGAACCGGGGGGAACCT--GCGGCCCACACGGTGAGTGAAGCAGTGCCCAGCTGTGAGTGACCGACGCAGGTAACCATAAGCCAAAGCTGCCTTGGACTAAAGGAAACGTC--CACACCCAGCTTGGGGTGGAGTCGCAAACCTCTGCACTAAACTGCAAACCCG-CTCTGTGACAAATA----AAACTAACACAGTACTTAGGCAGTGTTTCTCTTTCAGAAAGGATTCTATTTCCAATACAATTAAGGAGGAACATTGTATCTCTCTC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169897452 251 + 171630274 GGTGGACCAGCAGGAACCCCGGCAGCCCGCACCGTGCAGGAAGCACTGCTCAGCTGTGAGGGCCCGATGTAGGCAACCATAAGCCGAAGCCACCGTGGATTAAAGGAAACA----------CAGCTTGGGGTGGAGCTGCAAACCTCTCCACTGTGCTGCAAAGAGG-CTGCACGACAGATC----AAACTCATGCAGCACTTAGGC--TGTTTCTCTTTCAGAGAGGATTTTATCTCTAGCAGAATTGAGGAGAAACATTGTA----TCTC i calJac3.chr4 C 0 C 0 s canFam3.chr1 56180414 234 + 122678785 ------------GGACCTGTGTTTGCCTGCA--GTGAGCAGAGCGCTTCTCAG----GAG-----AAGGCAAGTAGCCATAAGCCAAAACCACTGTGGATTAAAAGAGAAGTCAACACATACAATTT---ATGGAGATGCTAACCTCCGCACCATGATGCAAGCATG-TTGTATGGCAAAGAGAATGAATGAATGCAACACTGAGATTGTATTTCTCTTTCAGAAAGGGTTTTATTTCCA-------TGAAAAAGAGCATTATA----TCTC i canFam3.chr1 C 0 I 95 a score=9090.000000 s hg38.chr6_KB021644v2_alt 112527 4 + 185823 -TCAA s panTro4.chr6 170699752 4 + 172623881 -TCAA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172454684 4 + 174210431 -TCAA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156310452 5 + 157873769 AACAA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168131849 4 + 169853907 -TCAG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169086090 4 - 170955103 -TCAG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163902865 4 + 165299245 -TCAG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96690024 4 + 98384682 -TCAG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169897703 4 + 171630274 -TCAA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56180648 95 + 122678785 I a score=160168.000000 s hg38.chr6_KB021644v2_alt 112531 47 + 185823 TGGTGAAACTCTCCAGGTGTTGTCCCGAGTAATGTTTCGGGGACAGA s panTro4.chr6 170699756 47 + 172623881 TGGTGAAACTCTCCAGGTGTTGTCCAGAGTAATGTTTCGGGGACAGA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172454688 47 + 174210431 TGGTGAAACTCTCCAGGTGTTGTCCAGAGTAATGTTTCGGGGACAGA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156310457 46 + 157873769 TGGTGAAACTCTCCATGTGTTGTCCAGAGTAATGTTTC-AGGACAGA i nomLeu3.chr3 C 0 M 100 s rheMac3.chr4 168131853 47 + 169853907 TGGTGAAACTCTCCAGGTGTTGTCCAGAGTAACATTTTGGGGACAGA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169086094 47 - 170955103 TGGTGAAACTCTCCAGGTGTTGTCCAGAGTAACATTTTGGGGACAGA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163902869 47 + 165299245 TGGTGAAACTCTCCAGGTGTTGTCCAGAGTAACATTTTGGGGACAGA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96690028 47 + 98384682 TGGTGAAACTCTCCAGGTGTTGTCCAGAGTAACATTTTGGGGACAGA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169897707 47 + 171630274 TGGTGAAACTCTCCAGGTGTTGTCCAGAGTCACGTTTTGGGGACAGA i calJac3.chr4 C 0 C 0 s canFam3.chr1 56180743 47 + 122678785 TGTTGGGACTCTCCAGGTGTTGTTCGGACTTCCCTTTCTCTGAAAGA i canFam3.chr1 I 95 C 0 a score=15580.000000 s hg38.chr6_KB021644v2_alt 112578 6 + 185823 AAAGAT s panTro4.chr6 170699803 6 + 172623881 AAAGAT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172454735 6 + 174210431 AAAGAT i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168131900 6 + 169853907 AAAGAT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169086141 6 - 170955103 AAAGAT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163902916 6 + 165299245 AAAGAT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96690075 6 + 98384682 AAAGAT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169897754 6 + 171630274 AAAGTT i calJac3.chr4 C 0 C 0 s canFam3.chr1 56180790 6 + 122678785 AAGTAT i canFam3.chr1 C 0 I 15 e nomLeu3.chr3 156310503 100 + 157873769 M a score=177367.000000 s hg38.chr6_KB021644v2_alt 112584 91 + 185823 GAGAGGGTACAGAGCTACCCGGGTCAGAACTGTCCCCTCAGGTCAGAGCTGCTCCCCCAGGTCAGAATGGCCCCCCC----------------AGGTCAAAGCTGCC s panTro4.chr6 170699809 90 + 172623881 GAGAGGGTACAGAGCTACT-GGGTCAGAACTGTCCCCTCAGGTCAGAGCTGCTCCCCCAGGTCAGAATGGCCCCCCC----------------AGGTCAAAGCTGCC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172454741 91 + 174210431 GAGAGGGTACAGGGCTACCCGGGTCAGAACTGTCCCCTCAGGTCAGAGCTGCCCCCCCAGGTCACAACGGCCCCCCC----------------AGGTCAAAGCTGCC i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168131906 91 + 169853907 GAGAGGGTGCAGGGCTACCCAGGTCAGAGTTGTCACCTCAGGTCAGAGCTGTCCCCCGAGGTCAGAAAGGTCCCCCA----------------AGGTCAGAACTGCC i rheMac3.chr4 C 0 I 1 s macFas5.chr4 169086147 91 - 170955103 GAGAGGGTGCCGGGCTACCCAGGTCAGAGTTGTCACCTCAGGTCAGAGCTGTCCCCCGAGGTCAGAAAGGTCCCCCA----------------AGGTCAGAACTGCC i macFas5.chr4 C 0 I 1 s papAnu2.chr4 163902922 91 + 165299245 GAGAGGGTGCAGGGCTACCCAGGTCAGAGTTGTCACCTCAGGTCAGAGCTGTCCCCCGAGGTCAGAAAGGTCCCCCG----------------AGGTCAGAAAGGTC i papAnu2.chr4 C 0 I 1 s chlSab2.chr13 96690081 91 + 98384682 GAGAGGGTGCAGGGCTACCCAGGTCAGAGTTGTCACCTCAGGTCAGAGCTGTCCCCCGAGGTCAGAAAGGTCCCCCA----------------AGGTCAGAACTGCC i chlSab2.chr13 C 0 I 1 s calJac3.chr4 169897760 105 + 171630274 GAGAGGGTACAGTGCTACCATGGTCAGAACTG-CCCTCCAGGTCAGAACTGCCCCCC-AGGTCAGAGCTACTCCCCAGGTTAGAACTAACCCCAGGTCAGAGCTACC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56180796 15 + 122678785 I e nomLeu3.chr3 156310503 100 + 157873769 M a score=-1757.000000 s hg38.chr6_KB021644v2_alt 112675 4 + 185823 CC-TG s panTro4.chr6 170699899 5 + 172623881 CCCTG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172454832 5 + 174210431 CCCCA i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168131998 4 + 169853907 CCCC- i rheMac3.chr4 I 1 C 0 s macFas5.chr4 169086239 4 - 170955103 CCCC- i macFas5.chr4 I 1 C 0 s papAnu2.chr4 163903014 4 + 165299245 CCCA- i papAnu2.chr4 I 1 C 0 s chlSab2.chr13 96690173 4 + 98384682 CCCC- i chlSab2.chr13 I 1 C 0 s calJac3.chr4 169897865 4 + 171630274 CCCC- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56180796 15 + 122678785 I e nomLeu3.chr3 156310503 100 + 157873769 M a score=99221.000000 s hg38.chr6_KB021644v2_alt 112679 51 + 185823 AGGACAGAACGGCCCCCCCAGGTCAGAACTGCCCCCG-ACCCAGGTCAGAAC--- s panTro4.chr6 170699904 51 + 172623881 AGGACAGAACGGCCCCCCCAGGTCAGAACTGCCCCCG-ACCCAGGTCAGAAC--- i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172454837 48 + 174210431 GGGTCAGAAAGGCTCCCCCAGGTCAAAACTGCCTC----CCCAGGTCAGAAC--- i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156310603 50 + 157873769 AGGTCAGAGCTGCCTCCCCGGGTCATAACTGCCCCCC--CCCAGGTCAGAGC--- i nomLeu3.chr3 M 100 C 0 s rheMac3.chr4 168132002 52 + 169853907 AGGTCAGAGCTGTCCCCCCAGGTCAGAACTGCCCCCCCACCCACATCAGAAC--- i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169086243 52 - 170955103 AGGTCAGAGCTGTCCCCCCAGGTCAGAACTGCCCCCCCATCCACATCAGAAC--- i macFas5.chr4 C 0 T 57 s papAnu2.chr4 163903018 48 + 165299245 AGGTCAGAACTGCCTCCCCAGGTCAGAGCTGTCCCCCCAG----GTCTGAAC--- i papAnu2.chr4 C 0 I 9 s chlSab2.chr13 96690177 52 + 98384682 AGGTCAGAGCTGTCCTCCCATGTCAGAACTGTCCCCCCACCCACATCAGAAC--- i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169897869 51 + 171630274 AGGTCAGAGCTA-CTCCCCAGGTTAGAACTACCCCCC---CCAGGTCAGAGCTAC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56180796 15 + 122678785 I a score=25071.000000 s hg38.chr6_KB021644v2_alt 112730 14 + 185823 T-------CCCCAGGTCAGAG s panTro4.chr6 170699955 14 + 172623881 T-------CCCCAGGTCAGAG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172454885 21 + 174210431 TGCCCCCCCCCCAGGTCAGAA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156310653 18 + 157873769 TGCCT---CCCCAGGTCAGAA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168132054 14 + 169853907 -------TCCCTAGGTCAGAG i rheMac3.chr4 C 0 I 26 s macFas5.chr4 169086238 14 - 170955103 -------TCCCCAGGTCAGAG i macFas5.chr4 T 57 C 0 s papAnu2.chr4 163903075 14 + 165299245 -------AACCCACATCAGAA i papAnu2.chr4 I 9 C 0 s chlSab2.chr13 96690229 14 + 98384682 -------TCCCTAGGCCAGAG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169897920 14 + 171630274 -------TCCCCAGGTCAGAG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56180796 15 + 122678785 I a score=28714.000000 s hg38.chr6_KB021644v2_alt 112744 23 + 185823 CTGCCTC------CCCAGGTCAGAACTGC s panTro4.chr6 170699969 23 + 172623881 CTGCCTC------CCCAGGTCACAACTGC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172454906 26 + 174210431 CTGCCCCC---TACCCAGGTCAGAGCTGC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156310671 29 + 157873769 CTGCCCCCCCACCCCCAGGTCAGAGCTGC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169086252 23 - 170955103 CTGTCCC------CCCAGGTCAGAACTGC i macFas5.chr4 C 0 I 38 s papAnu2.chr4 163903089 19 + 165299245 ----CTC------CCTAGGTCAGAGTTGT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96690243 23 + 98384682 TTGTTCC------CCGAGGTCAGAAAGGC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169897934 22 + 171630274 CTA-CCC------CCCAGATCAGAGCTAC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56180796 15 + 122678785 I e rheMac3.chr4 168132068 26 + 169853907 I a score=808.000000 s hg38.chr6_KB021644v2_alt 112767 1 + 185823 C s panTro4.chr6 170699992 1 + 172623881 C i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172454932 1 + 174210431 C i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156310700 1 + 157873769 C i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169086313 1 - 170955103 T i macFas5.chr4 I 38 C 0 s papAnu2.chr4 163903108 1 + 165299245 T i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96690266 1 + 98384682 C i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169897956 1 + 171630274 T i calJac3.chr4 C 0 C 0 e canFam3.chr1 56180796 15 + 122678785 I e rheMac3.chr4 168132068 26 + 169853907 I a score=4728.000000 s hg38.chr6_KB021644v2_alt 112768 3 + 185823 CCC s panTro4.chr6 170699993 3 + 172623881 CCC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172454933 3 + 174210431 TCT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156310701 3 + 157873769 CCC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169086314 3 - 170955103 CCC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163903109 3 + 165299245 CCC i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169897957 3 + 171630274 CCC i calJac3.chr4 C 0 I 1 e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e rheMac3.chr4 168132068 26 + 169853907 I a score=447.000000 s hg38.chr6_KB021644v2_alt 112771 2 + 185823 CG s panTro4.chr6 170699996 2 + 172623881 CG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172454936 2 + 174210431 CC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156310704 2 + 157873769 CA i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169086317 2 - 170955103 TG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163903112 2 + 165299245 CA i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169897960 1 + 171630274 I e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e rheMac3.chr4 168132068 26 + 169853907 I a score=38928.000000 s hg38.chr6_KB021644v2_alt 112773 33 + 185823 AGGTCAGAAAGGCCCCCCG-AGGTGAGAACTGCC s panTro4.chr6 170699998 34 + 172623881 AGGTCAGAAAGGCCCCCCCCAGGTGAGAACTGCC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172454938 33 + 174210431 AGGTCAGAACTGCCCCCCC-AGGTCAGAGCTGCC i ponAbe2.chr6 C 0 T 8420 s nomLeu3.chr3 156310706 32 + 157873769 AGGTCAGAAAGGCCCCCCC--GGTCAGAACGGCC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169086319 31 - 170955103 AGGTCAGAAGGGCCCTCCC-AGGTCAGAACTG-- i macFas5.chr4 C 0 T 75 s papAnu2.chr4 163903114 33 + 165299245 AGGTCAGAAAGGTCCCCCC-AGGTGAGAACTGCC i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169897961 32 + 171630274 AGGTTAGAACTAACCCCC--AGGTCAGAGCTACC i calJac3.chr4 I 1 C 0 e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e rheMac3.chr4 168132068 26 + 169853907 I a score=6405.000000 s hg38.chr6_KB021644v2_alt 112806 15 + 185823 TCTCCAGGTCAGAAG s panTro4.chr6 170700032 15 + 172623881 TCTCCAGGTCAGAAG i panTro4.chr6 C 0 C 0 s papAnu2.chr4 163903147 15 + 165299245 TCCCCAGGTCAGAAT i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169897993 14 + 171630274 -CCCCAGGTCAGAGC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e nomLeu3.chr3 156310738 0 + 157873769 C e rheMac3.chr4 168132068 26 + 169853907 I e ponAbe2.chr6 172454971 8420 + 174210431 T e macFas5.chr4 169086350 75 - 170955103 T a score=1386.000000 s hg38.chr6_KB021644v2_alt 112821 2 + 185823 TG s panTro4.chr6 170700047 2 + 172623881 TG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172446551 2 + 174210431 TG i ponAbe2.chr6 T 8420 C 0 s papAnu2.chr4 163903162 2 + 165299245 TG i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169898007 2 + 171630274 TA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e nomLeu3.chr3 156310738 0 + 157873769 C e rheMac3.chr4 168132068 26 + 169853907 I e macFas5.chr4 169086350 75 - 170955103 T a score=11937.000000 s hg38.chr6_KB021644v2_alt 112823 11 + 185823 CCCCCCACCCA s panTro4.chr6 170700049 11 + 172623881 CCCCCCACCCA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172446553 11 + 174210431 CCCCCCACCCA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156310738 10 + 157873769 -CCCCCCCCCA i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169086275 11 - 170955103 CCCCCCATCCA i macFas5.chr4 T 75 C 0 s papAnu2.chr4 163903164 11 + 165299245 TCCCCTCTCCA i papAnu2.chr4 C 0 T 94 s calJac3.chr4 169898009 7 + 171630274 CCCCCCA---- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e rheMac3.chr4 168132068 26 + 169853907 I a score=39827.000000 s hg38.chr6_KB021644v2_alt 112834 27 + 185823 AGTCAGAATT----CCCCAAGTCAGAGCTGT s panTro4.chr6 170700060 27 + 172623881 AGTCAGAATT----CCCCAAGTCAGAGCTGT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172446564 27 + 174210431 GGTCAGAACT----CCCCAAGTCAGAGCTGT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156310748 27 + 157873769 GGTCAGAACT----CCCCAGGTCAGAGCTGT i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169086286 27 - 170955103 CATCAGAACT----CCCTAGGTCAGAGTTGT i macFas5.chr4 C 0 I 74 s papAnu2.chr4 163903081 27 + 165299245 CATCAGAACT----CCCTAGGTCAGAGTTGT i papAnu2.chr4 T 94 C 0 s calJac3.chr4 169898016 31 + 171630274 GGTCAGAACTGCTCCCCTAGGTCAGAGCTAC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e rheMac3.chr4 168132068 26 + 169853907 I a score=25851.000000 s hg38.chr6_KB021644v2_alt 112861 26 + 185823 CCCCCCACCCAGGT---AACTGTCCCCCC s panTro4.chr6 170700087 26 + 172623881 CCCCCCACCCAGGT---AACTGTCCCCCA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172446591 26 + 174210431 CCCCCAACCCAGGT---AACTGTCCCCCC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156310775 29 + 157873769 CCCCCCACCCAGGTGAGAACTGCCTCCCC i nomLeu3.chr3 C 0 T 201 s macFas5.chr4 169086387 29 - 170955103 CCCCCCACCCAGGTGAGAACTGCCTCCCC i macFas5.chr4 I 74 C 0 s papAnu2.chr4 163903108 25 + 165299245 -TCCCCA---AGGTCAGAAAGGTCCCCCC i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169898047 24 + 171630274 -----TCCCCAGGTTAGAACTACTCCCCT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e rheMac3.chr4 168132068 26 + 169853907 I a score=29528.000000 s hg38.chr6_KB021644v2_alt 112887 19 + 185823 AGGTCAGAACTGCCTCTTC s panTro4.chr6 170700113 19 + 172623881 AGGTCAGAACTGCCTCTTC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172446617 19 + 174210431 AGATCAGAACTGCCCCACC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156310603 19 + 157873769 AGGTCAGAGCTGCCTCCCC i nomLeu3.chr3 T 201 C 0 s macFas5.chr4 169086416 19 - 170955103 AGGTCAGAATTGCCCCCTC i macFas5.chr4 C 0 T 173 s papAnu2.chr4 163903133 19 + 165299245 AGGTGAGAACTGCCTCCCC i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169898071 19 + 171630274 AGGTCAGAACTGCCCCCCC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e rheMac3.chr4 168132068 26 + 169853907 I a score=17770.000000 s hg38.chr6_KB021644v2_alt 112906 22 + 185823 GGGTCAGAACTGCCCCC-------------CCACC s panTro4.chr6 170700132 22 + 172623881 GGGTCAGAACTGCCCCC-------------CTACC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172446636 18 + 174210431 ATGTCAGAACTGCCTC-----------------CT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156310622 20 + 157873769 GGGTCATAACTGCCCCC-------------C--CC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169086262 22 - 170955103 AGGTCAGAACTGCCCCC-------------CCATC i macFas5.chr4 T 173 C 0 s papAnu2.chr4 163903152 22 + 165299245 AGGTCAGAATTGTCCCC-------------TCTCC i papAnu2.chr4 C 0 T 95 s calJac3.chr4 169898090 35 + 171630274 AGGTGAGAACTACCCCCGAGGTCAGAGCCACCACC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e rheMac3.chr4 168132068 26 + 169853907 I a score=9570.000000 s hg38.chr6_KB021644v2_alt 112928 22 + 185823 CAGGTCAGAGCTGCCCCCGCCC s panTro4.chr6 170700154 22 + 172623881 CAGGTCAGAGCTGCCCCCGCCC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172446654 22 + 174210431 CGGGTCAGAACTGCCCCCTACC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156310642 14 + 157873769 CAGGTCAGAGCTGC-------- i nomLeu3.chr3 C 0 C 0 s calJac3.chr4 169898125 18 + 171630274 CAGGTTAGAACTACCCTC---- i calJac3.chr4 C 0 T 183 e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e papAnu2.chr4 163903174 95 + 165299245 T e rheMac3.chr4 168132068 26 + 169853907 I e macFas5.chr4 169086284 0 - 170955103 C a score=29323.000000 s hg38.chr6_KB021644v2_alt 112950 25 + 185823 CAGGTTAGAA----CT---CCCCAGGTCAGAG s panTro4.chr6 170700176 25 + 172623881 CAGGTTAGAA----CT---CCCCAGGTCAGAG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172446676 29 + 174210431 CAGGTCAGAGCTGCCT---CTCCAGGTCAGAA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156310656 15 + 157873769 --------------CT---CCCCAGGTCAGAA i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169086284 25 - 170955103 CACATCAGAA----CT---CCCTAGGTCAGAG i macFas5.chr4 C 0 I 4 s papAnu2.chr4 163903079 25 + 165299245 CACATCAGAA----CT---CCCTAGGTCAGAG i papAnu2.chr4 T 95 C 0 s calJac3.chr4 169897960 28 + 171630274 CAGGTTAGAA----CTAACCCCCAGGTCAGAG i calJac3.chr4 T 183 C 0 e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e rheMac3.chr4 168132068 26 + 169853907 I a score=25886.000000 s hg38.chr6_KB021644v2_alt 112975 45 + 185823 CTTCCTCCCCAGGTCAAAACTGTACCCCCCACTGGTCAGAACTGC s panTro4.chr6 170700201 45 + 172623881 CTGCCTCCCCAGGTCAAAACTGTCCCCCCCACAGGTCAGAACTGC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172446705 43 + 174210431 CTGCCCCCCCAGGTCAGAGCTG--CCCCCTGCAGGTCAGAATGGC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156310671 29 + 157873769 CTGCCCCCCCA----------------CCCCCAGGTCAGAGCTGC i nomLeu3.chr3 C 0 C 0 s papAnu2.chr4 163903104 42 + 165299245 TTGTTCCCCAAGGTCAGAAAGG---TCCCCCCAGGTGAGAACTGC i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169897988 40 + 171630274 -CTACCCCCCAGGTCAGAGCTA----CCCCCCAGGTCAGAACTGC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e rheMac3.chr4 168132068 26 + 169853907 I e macFas5.chr4 169086309 4 - 170955103 I a score=23684.000000 s hg38.chr6_KB021644v2_alt 113020 25 + 185823 CCCCTGAGGTCAGAAAGGCCCCCCC s panTro4.chr6 170700246 25 + 172623881 CCCCCAAGGTCAGAAAGACCCCCCC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172446748 23 + 174210431 CCCCC-AGGTCAGAACTGCTCCCC- i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156310700 25 + 157873769 CCCCCAAGGTCAGAAAGGCCCCCCC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169086313 25 - 170955103 TCCCTGAGGTCAGAAGGGCCCTCCC i macFas5.chr4 I 4 C 0 s papAnu2.chr4 163903146 25 + 165299245 CTCCCCAGGTCAGAATTGTCCCCTC i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169898028 22 + 171630274 TCCCCTAGGTCAGAGCTACTCC--- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e rheMac3.chr4 168132068 26 + 169853907 I a score=807.000000 s hg38.chr6_KB021644v2_alt 113045 2 + 185823 CC s panTro4.chr6 170700271 2 + 172623881 CC i panTro4.chr6 C 0 C 0 s papAnu2.chr4 163903171 2 + 165299245 TC i papAnu2.chr4 C 0 T 139 s calJac3.chr4 169898050 2 + 171630274 CC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e nomLeu3.chr3 156310725 0 + 157873769 C e rheMac3.chr4 168132068 26 + 169853907 I e ponAbe2.chr6 172446771 0 + 174210431 C e macFas5.chr4 169086338 0 - 170955103 C a score=91.000000 s hg38.chr6_KB021644v2_alt 113047 1 + 185823 A s calJac3.chr4 169898052 1 + 171630274 A i calJac3.chr4 C 0 C 0 e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e papAnu2.chr4 163903173 139 + 165299245 T e nomLeu3.chr3 156310725 0 + 157873769 C e rheMac3.chr4 168132068 26 + 169853907 I e ponAbe2.chr6 172446771 0 + 174210431 C e macFas5.chr4 169086338 0 - 170955103 C e panTro4.chr6 170700273 0 + 172623881 C a score=16079.000000 s hg38.chr6_KB021644v2_alt 113048 37 + 185823 GGTCAGAACTGCCCCCCCTAGGTCAGAACTGCCCCCC s panTro4.chr6 170700273 19 + 172623881 ------------------CAGGTCAGAACTGCCCCCC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172446771 19 + 174210431 ------------------CAGGTCAGAAATGCCCCCC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156310725 17 + 157873769 --------------------GGTCAGAACGGCCCCCC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169086338 18 - 170955103 -------------------AGGTCAGAACTGACCCCC i macFas5.chr4 C 0 C 0 s calJac3.chr4 169898053 36 + 171630274 GGTTAGAACTACTCCCC-TAGGTCAGAACTGCCCCCC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e papAnu2.chr4 163903173 139 + 165299245 T e rheMac3.chr4 168132068 26 + 169853907 I a score=-69.000000 s hg38.chr6_KB021644v2_alt 113085 1 + 185823 A s panTro4.chr6 170700292 1 + 172623881 A i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172446790 1 + 174210431 A i ponAbe2.chr6 C 0 T 231 s nomLeu3.chr3 156310742 1 + 157873769 C i nomLeu3.chr3 C 0 I 1 e calJac3.chr4 169898089 0 + 171630274 C e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e papAnu2.chr4 163903173 139 + 165299245 T e rheMac3.chr4 168132068 26 + 169853907 I e macFas5.chr4 169086356 0 - 170955103 C a score=76659.000000 s hg38.chr6_KB021644v2_alt 113086 73 + 185823 CCCAAGTCAGAACTCCCC---AAGTCAGAGCTGTCCCCCCACCCAGTT---AACTCTCCCCCCAGGTCAGAACTGCCCC s panTro4.chr6 170700293 73 + 172623881 CCCAAGTCAGAACTCCCC---AAGTCAGAGCTGTCCCCCCACCCAGGT---AACTCTCCCCCCAGGTCAGAACTGCCCC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172446560 73 + 174210431 CCCAGGTCAGAACTCCCC---AAGTCAGAGCTGTCCCCCAACCCAGGT---AACTGTCCCCCCAGATCAGAACTGCCCC i ponAbe2.chr6 T 231 C 0 s nomLeu3.chr3 156310744 76 + 157873769 CCCAGGTCAGAACTCCCC---AGGTCAGAGCTGTCCCCCCACCCAGGTGAGAACTGCCTCCCCAGGTCAGAATTGCCCC i nomLeu3.chr3 I 1 T 161 s macFas5.chr4 169086356 76 - 170955103 CCCAGGTCAGAACTCCCC---AGGTCAGAGCTGTCCCCCCACCCAGGTGAGAACTGCCTCCCCAGGTCAGAATTGCCCC i macFas5.chr4 C 0 T 76 s calJac3.chr4 169898089 71 + 171630274 --CAGGTGAGAACTACCCCCGAGGTCAGAG-----CCACCACCCAGGTTAGAACTA-CCCTCCAGGTCAGAACTGCCCC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e papAnu2.chr4 163903173 139 + 165299245 T e rheMac3.chr4 168132068 26 + 169853907 I a score=23699.000000 s hg38.chr6_KB021644v2_alt 113159 43 + 185823 ACCATGTCAGAACTGT------------------CCCCCGA--CCCAGGTCAGAGCTACCCCT s panTro4.chr6 170700366 43 + 172623881 ACCATGTCAGAACTGT------------------CCCCCGA--CCCAGGTCAGAGCTGCCCCT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172446633 61 + 174210431 ACCATGTCAGAACTGCCTCCTCGGGTCAGAACTGCCCCCTA--CCCAGGTCAGAGCTGCCTCT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156310659 45 + 157873769 CCCAGGTCAGAACTGC------------------CCCCCCACCCCCAGGTCAGAGCTGCCCCC i nomLeu3.chr3 T 161 C 0 s calJac3.chr4 169898160 39 + 171630274 CCCAGGCCAGAGCTAC------------------CCC------CCCAGGTTAGAACTACCTCC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e papAnu2.chr4 163903173 139 + 165299245 T e rheMac3.chr4 168132068 26 + 169853907 I e macFas5.chr4 169086432 76 - 170955103 T a score=810.000000 s hg38.chr6_KB021644v2_alt 113202 2 + 185823 CC s panTro4.chr6 170700409 2 + 172623881 CC i panTro4.chr6 C 0 C 0 s chlSab2.chr13 96690267 2 + 98384682 CC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169898199 1 + 171630274 -C i calJac3.chr4 C 0 C 0 e canFam3.chr1 56180796 15 + 122678785 I e papAnu2.chr4 163903173 139 + 165299245 T e nomLeu3.chr3 156310704 0 + 157873769 C e rheMac3.chr4 168132068 26 + 169853907 I e ponAbe2.chr6 172446694 0 + 174210431 C e macFas5.chr4 169086432 76 - 170955103 T a score=7986.000000 s hg38.chr6_KB021644v2_alt 113204 22 + 185823 CCCAGGTCAGAACAGCCCCC---------------------------CC s panTro4.chr6 170700411 49 + 172623881 CCCAGGTCAGAACAGCCCCCGCCCCCCAGGTCAGAACAGCCCCCCCACC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172446694 40 + 174210431 -CCAGGTCAGAACTGCCCCC-----CCAGGTCAGAGCTGCCCCC---TG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156310704 21 + 157873769 -CAAGGTCAGAAAGGCCCCC-----CC---------------------- i nomLeu3.chr3 C 0 C 0 s papAnu2.chr4 163903034 21 + 165299245 CCCAGGTCAGAGCTGTCCCC-----C----------------------- i papAnu2.chr4 T 139 C 0 s chlSab2.chr13 96690269 21 + 98384682 CCCAGGTCAGAACTGCCCCC-----C----------------------- i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169898200 17 + 171630274 -----ATCAGAGCTGCCACC-----TC---------------------- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56180796 15 + 122678785 I e rheMac3.chr4 168132068 26 + 169853907 I e macFas5.chr4 169086432 76 - 170955103 T a score=1691.000000 s hg38.chr6_KB021644v2_alt 113226 2 + 185823 CA s panTro4.chr6 170700460 2 + 172623881 CA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172446734 2 + 174210431 CA i ponAbe2.chr6 C 0 C 0 s papAnu2.chr4 163903055 2 + 165299245 CA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96690290 2 + 98384682 TA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169898217 1 + 171630274 -A i calJac3.chr4 C 0 C 0 e canFam3.chr1 56180796 15 + 122678785 I e nomLeu3.chr3 156310725 0 + 157873769 C e rheMac3.chr4 168132068 26 + 169853907 I e macFas5.chr4 169086432 76 - 170955103 T a score=24334.000000 s hg38.chr6_KB021644v2_alt 113228 18 + 185823 GGTCAGAACGGCCCCCCA s panTro4.chr6 170700462 18 + 172623881 GGTCAGAACGGCCCCTCA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172446736 18 + 174210431 GGTCAGAATGGCCCCCCA i ponAbe2.chr6 C 0 I 15 s nomLeu3.chr3 156310725 18 + 157873769 GGTCAGAACGGCCCCCCC i nomLeu3.chr3 C 0 I 1 s papAnu2.chr4 163903057 18 + 165299245 GGTCTGAACTGccccccc i papAnu2.chr4 C 0 I 2 s chlSab2.chr13 96690292 18 + 98384682 GGCCAGAAAGGTCCCCCA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169898218 17 + 171630274 GGTCAGAATGGTCCCCC- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56180796 15 + 122678785 I e rheMac3.chr4 168132068 26 + 169853907 I e macFas5.chr4 169086432 76 - 170955103 T a score=6580.000000 s hg38.chr6_KB021644v2_alt 113246 3 + 185823 CCC s panTro4.chr6 170700480 3 + 172623881 CCC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172446769 3 + 174210431 CCC i ponAbe2.chr6 I 15 C 0 s nomLeu3.chr3 156310744 3 + 157873769 CCC i nomLeu3.chr3 I 1 C 0 s rheMac3.chr4 168132094 3 + 169853907 CCC i rheMac3.chr4 I 26 C 0 s macFas5.chr4 169086356 3 - 170955103 CCC i macFas5.chr4 T 76 C 0 s papAnu2.chr4 163903077 3 + 165299245 CCC i papAnu2.chr4 I 2 I 661 s calJac3.chr4 169898235 1 + 171630274 --C i calJac3.chr4 C 0 C 0 e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690310 0 + 98384682 C a score=28756.000000 s hg38.chr6_KB021644v2_alt 113249 9 + 185823 AGGTCAGAA s panTro4.chr6 170700483 9 + 172623881 AGGTCAGAA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172446772 9 + 174210431 AGGTCAGAA i ponAbe2.chr6 C 0 I 8233 s nomLeu3.chr3 156310747 9 + 157873769 AGGTCAGAA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168132097 9 + 169853907 AGGTCAGAA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169086359 9 - 170955103 AGGTCAGAA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163903741 9 + 165299245 aGGTCAGAG i papAnu2.chr4 I 661 C 0 s chlSab2.chr13 96690310 9 + 98384682 AGGTCAGAA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169898236 9 + 171630274 AGGTTAGAA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56180796 15 + 122678785 I a score=-4245.000000 s hg38.chr6_KB021644v2_alt 113258 3 + 185823 CT-----C------ s panTro4.chr6 170700492 3 + 172623881 CT-----C------ i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156310756 3 + 157873769 CT-----C------ i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168132106 3 + 169853907 CT-----C------ i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169086368 3 - 170955103 CT-----C------ i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163903750 7 + 165299245 TTGTTC-C------ i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96690319 8 + 98384682 CTGTCCAC------ i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169898245 7 + 171630274 -------CTACCAC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56180796 15 + 122678785 I e ponAbe2.chr6 172446781 8233 + 174210431 I a score=111053.000000 s hg38.chr6_KB021644v2_alt 113261 42 + 185823 CCCAGGTCAAAGCTGTCCCCCCA---------------------CCCAGGTGAGAACTGCCTC s panTro4.chr6 170700495 42 + 172623881 CCCAGGTCAGAGCTGTCCCCCCA---------------------CCCAGGTGAGAACTGCCTC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172455014 42 + 174210431 CCCAGGTCAGAGCTGTCCCCTCA---------------------CCCAGGTGAGAACTGCCTC i ponAbe2.chr6 I 8233 C 0 s nomLeu3.chr3 156310759 42 + 157873769 CCCAGGTCAGAGCTGTCCCCCCA---------------------CCCAGGTGAGAACTGCCTC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168132109 42 + 169853907 CCCAGGTCAGAGCTGTCCCCCCA---------------------CCCAGGTGAGAACTGCCTC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169086371 42 - 170955103 CCCAGGTCAGAGCTGTCCCCCCA---------------------CCCAGGTGAGAACTGCCTC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163903757 38 + 165299245 CCAAGGTCAGAAAGGTCCC-------------------------CCCAGGTGAGAACTGCCTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96690327 42 + 98384682 CCCAGGTCAGAGCTGTCCCCCAA---------------------CCCAGGTGAGAACTGCCCC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169898252 63 + 171630274 CCCAGGTTGTAACTACCCCCCCAGCCCCCGGTTATAACTACCCTCCCAGGTCAGAGCTGCCCC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56180796 15 + 122678785 I a score=814111.000000 s hg38.chr6_KB021644v2_alt 113303 297 + 185823 CCCAGGTCAGAATTGCCCCCACTCCACCTCCAGGACATGGCCCAGCCACTTGTGGATAAGCATC--------------------------------------ATGGGGACGGAAGAGAGGATGG-AAAGTGAGAAGACGGGTGGGAAAGTCA-GACAGGCCAGCCTCAGGCCCCTCCCATGGCTTCGAGAACTTGGACCCTGCAGGTTCCCTACCAGGGCTGCTGTGCC--TACTGGACACGTTTTGCTTGGCCAGG--------------------CCTG--------------------CGTGGAGTGGGGACTCCCTGCCC--ATCCTGCAGCAGGAACGCAG-----------TCATAATTCATCCTGCAGTTACAATTTAGCAAGTA s panTro4.chr6 170700537 317 + 172623881 CCCAGGTCAGAATTGCCCCCACTCCACCTCCAGGACATGGCCCAGCCACTTGTGGATAAGCATC--------------------------------------ATGGGGACAGAAGAGAGGATGG-AAAGTGAGAAGATGGGTGGGAAAGTCA-GACAGGCCGGCCTCAGGCCCCTCCCATGGCTTCGAGAACTTGGACCCTGCAGGTTCCCTACCAGGGCTGCTGTGCC--TACTGGACAGGTTTTGCTTGGCCAGG--------------------CCTGTGTGGAGTGGGGACTCCCTGCGTGGAGTGGGGACTCCCTGCCC--ATCCTGCAGCAGGAACGCAG-----------TCATAATTCATCCTGCAGTTACAATTTACCAAGTA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172455056 318 + 174210431 CCCAGGTCAGAATTGCCCCCACTCCACCTCCAGGACGTGGCCTAGCCACTTGTGGATAAGCATC--------------------------------------ATGGGGACAGAAGAGAGGATGG-AAAGTGAGAAGACAGGTGGGAAAGTCA-GACAGGCCGGCCTCAGGCCCCTCCCATAGCTTCAGGAACTTGGACCCTGCAGGTTCCCTCCCAGGGCTGCTGTGCC--TACTGGACACATTTTGCTTGGCCAGG--------------------CCTGCGTGGAGTGGGGACTACCTGCGTGGAGTGGGGACTCCCTGCCC--AACCTGCAGCAGGAACACAG----------TTTGTAATTCATCCTGCAGTTACAATTTAGCAAGTA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156310801 295 + 157873769 CCCAGGTCAGAATTGCCCCCACTCCACCTCCAGGACGTGGCCCAGCCACTTGTGGATAAGCATC--------------------------------------ACGGGGACAGAAGAGAGGATGG-AAAGTGAGAAGATGGGTGGGAAAGTCA-GACAGGACGGCCTCAGGCCCCTCCCATGGCTTCGGGAGCTTGGACCCCGCAGGATCCCCCCCACGGCTGCTGTGCC--TACTGGACACATTTTGCTTGGCCAGG--------------------CCTGCGTGAA-----------------GAAGTGGGGACTCCCTG-------CATGGAGT-GGAACGCAG----------TTCGTAATTCATCCTGCAGTTAGAATTTAGCAAGTA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168132151 316 + 169853907 CCCAGGTCAGAATTGCCCCCTCTCCACCTACGGGACGTGGCCCAGCCTCTTGTGGATAAGCATG--------------------------------------GTGGGGACGGAAGAGCGGATGGAAAAGTGAGAAGACGGGT-GGAAAGTCA-GACAGGCCGGCCTCAGGCCCGTCCCATGGCTTCGGGAGCTTGGTCCCTGCAGGTTCCCT-CCAGGGCTGCTACGCC--TACTGGACACGGTTTGCTTAGCCAGG--------------------CCTGCGTGGAGTGGGGACTCCCTGCGTGGAGTGGGGCTTTCCTGCCC--ATCCTGCAGCACAAACCCAG-----------TCATAGTTCATCCTGCAGTTACAATTTAGCAAGTA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169086413 316 - 170955103 CCCAGGTCAGAATTGCCCCCTCTCCACCTACGGGACGTGGCCCAGCCTCTTGTGGATAAGCATG--------------------------------------GTGGGGACGGAAGAGCGGATGGAAAAGTGAGAAGACGGGT-GGAAAGTCA-GACAGGCCGGCCTCAGGCCCGTCCCATGGCTTCGGGAGCTTGGTCCCTGCAGGTTCCCT-CCAGGGCTGCTACGCC--TACTGGACACGGTTTGCTTGGCCAGG--------------------CCTGCGTGGAGTGGGGACTCCCTGCGTGGAGTGGGGATTTCCTGCCC--ATGCTGCAGCACAAACCCAG-----------TCATAGTTCATCCTGCAGTTACAATTTAGCAAGTA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163903795 318 + 165299245 CCCAGGTCAGAATTGTCCCCTCTCCACCTACAGGACGTGGCCCAGCCTCTTGTGGATAAGCATC--------------------------------------GTGGGGACGGAAGAGCGGATGGAAAAGTGAGAAGACGGGTGGGAAAGTCA-AACAGGCCGGCCTCAGGCCCCTCCCATGGCTTCGGGAGCTTGGACCCTGCAGGTTCCCTCCCAGGGCTGCTGCGCC--TACCGGACACGGTTTGCTTGGCCAAG--------------------CCTATGTGGAGTGGGGATTCCCTGCGTGGAGTGGGGATTTCCTGCCC--ATCCTGCAGCACAAACCCAG-----------TCGTAGTTCATCCTGAAGTTACAATTTAGCAagta i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96690369 336 + 98384682 CCCAGGTCAGAATTGCCCCCGCTCCACCTACAGGATGTGGCCCAGCCTCTTGTGGATAAGCATC--------------------------------------GTGGGGACAGAAGAGCAGATGG-AAAGTGAGAAGATGGGT-GGAAAGTCA-GACAGGCCGGCCTCAGGCCCCTCCCATGGCTTTGGGAGCTTGGTCCCTGCAGGTTCCCTCCCAGGGCTGCTGCGCC--TACTGGACACAGTTTGCTTGGCCAGGCCTGCGTCGAGTGGGGACTCCCTGCGTGGAGTGGGGACTCCCTGTGTGGAGTGGGGATTCCCTGCCC--ATCCTGCAGCACAAACCCAG-----------TTGTAGTTCATCCTGCAGTTACAATTTAGCAAGTA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169898315 287 + 171630274 CCCAGGTCAGAACTACCCCCTCTCCACCTCCAGGACGTGGCTCAGCCACTTGTGGATAAGCATG--------------------------------------GTGGGGACAGAAGAGCTGATG--AAAGTGAGAAGATGGGT-GGGAAGTCA-GACAGGACAGCCTCAGGTCC-TCCTGTGGCTTTGGGAGCTTGAGCCCTGCAGGTTTTTC-CTGGGGCTG-TGCACC--TACTGGACACGTTTTGCTTGGCCAGG--------------------CCTG--------------------TGTGGAGTGGCCATTCCCTGCCC--A-CCTGCGGCAGGAGCCCT------------TTGCAATTCATCT--GAGCTACAATTTAGCAAGT- i calJac3.chr4 C 0 C 0 s canFam3.chr1 56180811 347 + 122678785 CCAAGGTAAGAATGATCCCATACTTATCTCCAGGACATGGAATAACCACTTCATGATCAATATCTGTTTTTTTTTTTTTAATATTgagaagaattgatagagagggaggtgcaggaagggagag-agatggagaaggagaaggggagagaaaCAATAGGCCAGCCCCGGCTCCCTTCCACGGTTCCC--AGTCAGGATCCCACATACTCACT--TGACACTGCTGAACCATTCATGGAGGCGCTTTGCTCCGTCATA--------------------CCT-------------------TGCATGCACT-GTGAGTCCTTGCTCTTATTTCACAGTATTAACACGTTATTAATCATTTGGTTATTAATCACTCAGTGATGATTTAGCAGGTA i canFam3.chr1 I 15 I 355 a score=413804.000000 s hg38.chr6_KB021644v2_alt 113600 156 + 185823 ACTGtttttctt-------ttctttt----tttctttttggagatggagtcttgctc-tgctgcccaggctggagtgctatggggtgatcttggctcactgcaacctctgcctcccgggttcaagtgattctcccacctcagcctcccgagtggctgggattacggac s panTro4.chr6 170700854 159 + 172623881 ACTGtttttctt----cttttctttt----tttctttttggagatggagtcttgctc-tgttgcccaggctggagtgctatggggtgatcttggctcactgcaacttctgcctcccgggttcaagtaattctcccgcctcagcctcccgagtggctgggattacggac i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172455374 163 + 174210431 ACTATTttttttttttcttttctttt----tttctttttggagatggagtcttgctc-tgttgcccaggctggagtgctatggggtgatcttggctcactgcaacctctgcctcctgggttcaagtgattctcctgcctcagcctcccgagtggctgggattacggac i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156311096 160 + 157873769 ACTAtttttctt-------ttcttttgctctttctttttggagatggagtcttgctc-tgttgcccatgcaggagtgcaatggggagatcttggctcactgaaacctctgcctcccgcattcaagtggttctcccgcctcagcctcccgagtggctgggattacggac i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168132467 162 + 169853907 ACTAtttttctt--ttcttttctttt----tttctttttggagatggagtcttactcttgttgcccagggtggactgcaatggggtgatctcggctcactgcaccttccacctcccgggttcgagtgattctccagcctcagcctcccaagtagctgggattacagac i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169086729 162 - 170955103 ACTAtttttctt--ttcttttctttt----tttctttttggagatggagtcttactcttgttgcccaggttggactgcaatggggtgatctcggctcactgcaacttccacctcccgggttcgagtgattctccagcctcagcctcccaagtagctgggattacagac i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163904113 161 + 165299245 actatttttctt--ttcttttctttt----tttctttttggagatggagtcttactc-tgttgcccaggttggactgcaatggggtgatctcggctcactgcaatctccacctctcgggttcaagtgattctcctgcctcagcctcccaagtagctgggattatagac i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96690705 162 + 98384682 ACTAtttttctt--ttcttttcttta----tttctttttggagatggagtcttactcttgttgcccaggttggactgcaatggggtgatctcggctcactgcaacctccacctcccgggttcaagtgattctcctgccccagcctcccaagtagctgggattacagac i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169898602 150 + 171630274 ACTGtttttttc-------ttctttc----tttctccttggagatggagtcttgctc-tgcctcc------aggctgcagaggcgcaatctcatctcactgcaacctctgcctcccaggttcaggcaattgtccctcctcagcctccggggtagctgggactacaggc i calJac3.chr4 C 0 I 1106 e canFam3.chr1 56181158 355 + 122678785 I a score=6750.000000 s hg38.chr6_KB021644v2_alt 113756 5 + 185823 acgtg s panTro4.chr6 170701013 5 + 172623881 acgtg i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172455537 5 + 174210431 acaca i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156311256 5 + 157873769 acgcg i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168132629 5 + 169853907 atgtg i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169086891 5 - 170955103 atgtg i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163904274 5 + 165299245 acccg i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96690867 5 + 98384682 acgcg i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169898752 1106 + 171630274 I e canFam3.chr1 56181158 355 + 122678785 I a score=301638.000000 s hg38.chr6_KB021644v2_alt 113761 116 + 185823 ccaccacgcccagctaatttttatatttttgatagagacaaagtctcaaactccttacctcaagtgatccacccacctcggcctcccaaactgctgggattacaggtgtaagccac s panTro4.chr6 170701018 116 + 172623881 ccaccacgcccagctaatgtttatatttttgatagagacaaagtctcaaattccttacctcaagtgatccacccacctcggcctcccaaactgctgggattacaggtgtaagccac i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172455542 116 + 174210431 ccaccactcccggcttatttttgtatttttgatagagacaaagtctcgaactccttacctcaagtgatccacccacctcggcctcccaaaatgctgggattacaggtgtgagccac i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156311261 116 + 157873769 ccaccacgcctggctaatttttatgtttttgatagagacaaagtctcgaactccttacctcaagtgatccacccaccttggcctcccacagtgctgggattacaggtgtgagccac i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168132634 116 + 169853907 ccaccatgcccggctaatttttatatttttaatagagacgaagtctcgaactcctgacctcaagtgatccacccacctctgcctcccaaagtgctgggattacaggtgtgagccac i rheMac3.chr4 C 0 I 16 s macFas5.chr4 169086896 116 - 170955103 ccaccatgcccggctaatttttatatttttaatagagacgaagtctcgaactcctgacctcaagtgatccacccacctctgcctcccaaagtgctgggattacaggtgtgagccac i macFas5.chr4 C 0 I 13 s papAnu2.chr4 163904279 116 + 165299245 ccaccatgtccggctaatttttatatttttaatagagacaaagtctcgaactcctaacctcaagtgatccacccacctctgcctcccaaagtgctgggattacgggtgtgagccac i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96690872 115 + 98384682 ccaccatgtccggctaatttttatatttttaatagagagaaagtctcaaactcctaacctcaagtgatccaccca-ctctgcctcccaaagtgctgggattacaggtgtgagccac i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169899858 88 + 171630274 ccatcacacccggctaatttttgtatttttaatagagacgcgggctcaAACCCCTGG----------------------------CCACACTGCAAGGATGGCAGGAGTGAACCAC i calJac3.chr4 I 1106 C 0 e canFam3.chr1 56181158 355 + 122678785 I a score=69916.000000 s hg38.chr6_KB021644v2_alt 113877 54 + 185823 cacacccagccAGCAAGTACTATTTTTCTTAAGCTACTGCATGAAAGTTAAGAC s panTro4.chr6 170701134 54 + 172623881 cacacccagccAGCAAGTACTATTTTTCTTAAGCTACTGCATGAAAGTTAAGAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172455658 54 + 174210431 cgcgcccagccAGCAAGTACTATTTTTCTTAAGCTACTGCATGAAAGTTAAGAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156311377 38 + 157873769 cgcagccagccAGC----------------AAGCTACTGCATGAAAGTTAAGAC i nomLeu3.chr3 C 0 C 0 s papAnu2.chr4 163904395 54 + 165299245 tgtgcccagccagcaaaTACTATTTTTCTTAAGATACATCATGAAAGTTAAGAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96690987 54 + 98384682 tgtgcccggccAGCAAGTACTATTTTTCTTAAGCTACATCATGAAAGTTAAGAC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169899946 54 + 171630274 CATGCCTGGGTAGCAAGCGCCATCTTTCTCAAGATACACCATGAAAGTTGAGAC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56181158 355 + 122678785 I e rheMac3.chr4 168132750 16 + 169853907 I e macFas5.chr4 169087012 13 - 170955103 I a score=1272386.000000 s hg38.chr6_KB021644v2_alt 113931 688 + 185823 AAAGATTAAAATGAAAAATATGCATCTTCTTTAAAACATGCATTTTAATGAACTATAATAAAGAAACAAATGTATATTGGAGATTTTTTTAAGACGGCAATTGTTGCAAAATCTGACAAAGTTCCAAAAACAGTTTCAGAAATCCCTGAGCTGATCAGCACAGTTTT------AATTGTTCAAACTACATCTAAATATAGTAAATTGTACCATGATAGCTTACCAATGTCACTTTCAATATTTA-TAAGCATGAAGTTCAATTTATAATAAATGG-AAAATTTAAGAAATATTCTAAATTACTGCTGCATGTCAGTGTCTGTGAATTATTAACAGTT-GGGGTAAACTGTGGCATTGAAACAT---TTTTTGGTAACCCACATATCCAGGAGTTAGAGATATATTTAGCTACGATGTAAACTTCTGGAGCAAATGCAAAAGACATTCATGCTGAATCCAATACTTGAAATTAAGTTTAACAGAAGGCTCC---------ATCCCAGAATAGGTTCCATATCCAGAGCTGCAAATCGGCCTGAGCACCAGCATTCTGGAAGCTAAGCCAGGTGTGTCGCATCGTGCTCTGCAGAGTGGTCCTATAAAGATCTCCAGAAGTGGCCTCCGTGAGCGGACGTGCTGGAAATACTTCCTTGTTCGTGAGCTTACTG---GAAGCAAGGTAGCCCAGGGCTTGGGAGAGTGCGCTCCA s panTro4.chr6 170701188 697 + 172623881 AAAGATTAAAATGAAAAATATGCATCTTCTTTAAAACATGCATTTTAATGAACTATAATAAAGAAACAAATGTATATTGGAGATTTTTTTAAGACGGCAATTGTTGCAAAATCTGACAAAGTTCCAAAAACAGTTTCAGAAATCCCTGAGCTGATCAGCGCAGTTTT------AATTGTTCAAACTACATCTAAATATAGTAAATTGTACCATGATAGCTTACCAATGTCACTTTCAATATTTA-TAAGCATGAAGTTCAATTTATAATAAATGG-AAAATTTAAGAAATATTCTAAATTACTGCTGCATGTCAGTGTCTGTGAATTATTAACAGTT-GGGGTAAACTGTGGCATTGAAACAT---TTTCTGGTAAGCCACATATCCAGGAGTTAGAGATATATTTAGCTATGATGTAAACTTCTGGAGCAAATGCAAAAGAAATTCATGCTGAATCCAATACTTGAAATTCAGTTTAACCGAAGGCTCCGAAGGCTCCAGCTCAGAATAGGTTCCATATCCAGAGCTGCAAATCGGCCTGAGCACCAGCATTCTGGAAGCTAAGCCAGGTGTGTCGCATCGTGCTCTGCAGAGTGGTCCTATAAAGATCTCCAGAAGTGGCCTCCGTGAGCGGACGTGCTGGAAATACTTCCTTGTTCGTGAGCTCACTG---GAAGCAAGGTAGCCCAGGGCTTGGGAGAGTGCGCTCCA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172455712 688 + 174210431 AAAGATTAAAATGAAAAATATGCATCTTCTTTAAAACATGTATTTTAATGAACTATAATAAAGAAACAAATGTATATTGGAGATTTTTTTAAGATGGCAATTGTTGCAAAATCTAACAAAGTTCCAAAAACAGTTTCAGAAATCCCTGAGCTGATCAGCGCAGTTTT------AATTGTTCAAACTACATCTAAATATAGTAAATTGTACCATGATAGCTTACCAATGTCACTTTCAATATTTA-TAAGCATGAAGTTCAATTTATAATAAATGG-AAAATTTAAGAAATATTCTAAATTACTGCTGCATGTCAGTGTCTGTGAATTATTAACAGTT-GGGGTAAACTATGGCATTGAAACAT---TTTTTGGCAACCCACATATCCAGGAGTTAGAGATATATTTAGCTATGATGTAAACTTCTGGAGCAATTGCAAAAGAAATTCATGCTGAATCCAATACTTGAAATTAAGTTTAACCGAAGGCTCC---------ATCCCAGCATAGGTTCCATATCCAGAGCTGCAAATCGGCCTGAGCACCAGCATTCTGGAAGCTGAGCCAGGTGTGTCGCATCGTGCTCTGCAGAGTGGTCCTATAAAGATCTCCAGAAGTGGCCTCCGTGAACTGATGTGCTGGAAATACTTCCTTGTTTGTGAGCTTACTG---GAAGCAAGGTAGCCGAGGGCTTGGGAGAGTGGGCTCCA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156311415 689 + 157873769 AAAGATTAAAATGAAAAATATGCATCTTCTTTAAAACATGTATTTTAATGAACTATAATAAAGAAACAAATGTATATTGGAGATTTTTTTAAGATGGCAATTGTTGCAAAATTTAACAAAGTTCCAAAAACAGTTTCAGAAATCCCTGAGCTGATCAGCACACTTTT------AATTGTTCAAACTACATCTAAATATAGTAAATTGTACTATGATAGCTTACCAATGCCACTTTCAATATTTA-TAAGCATGAAGTTCAATTTATAATAAATGGAAAAATTTAAGAAATATTCTAAATTACTGCTGCATGTCAGTGTCTGTGAATTATTAACAGTT-GGGGTAAACTATGGCATTGAAACAT---GTTTTGGTAACCCACATATCCAGGAGTTAGAGATATATTTAGCTATGACATAAACTTCTGGAGCAATTACAAAAGAAATTCATGCTGAATCCAATACTTGAAATTAAGTTTAACCAAAGGCTGC---------ATCCCAGTATAGGTTCTATATCCAGAGCTGCAAATCAGCCTGAGCACCAGCATTCTGGAAGCTGACTCAGGTGTGTCGCATCGTGCCCTGCAGAGTGGTCCTATAAAAATCTCCAGAAGTGACCTCTGTGAGCTGATGTGCTGGAAATACCTCCTTGTTTGTGAGCTTACTG---GAAGCAAGGTAGCCGAGGGCTTGGGAGAGTAGGCTCCA i nomLeu3.chr3 C 0 C 0 s papAnu2.chr4 163904449 685 + 165299245 AAAGATTAAAATCAAAAATATGCATCTTCTTTAGAACATGTATTTTAATGAGTTATAATAAAGAAACGAATGTATAttggagattttttaaagatgacaaTTGTTGCAAAATCTAACAAAGTTCCAAAAACGGTTTCAGAAATCCCTGAGCTGATCAGCGCAGTTTT------AATTGTTCAAACTACATCTAAACATACTAAATCGTACCATGATAGCTTACCAATGTCACTTTCAGTATTTA-TAAGtatgaagttcaatttataataaatgg-gaaatttaagaaatattctaAATGACTGCTGCATGTCAGTGTCTGTGA---ATTAACAGTT-GGGGTAAACTAtggcatttaaacat---tttttggtaACCCACATATCCAGGAGTTAGAGATATATTTAGCTATGATGCAAACTTCTGGAGCAATTGCAAAAGAAATTCATGCTGAATCCAATACTCGAACTTAAGTTTAACCAAGGGCTCC---------ATCCCAGCATAGGTGCCATATCCAGAGCTGCAAATCAGCCTGAGCACCAGcattctggaggctgagccaggtgtgTCGCTTCGTGCTCTGCAGAGTGGCCCTATAAACACCTCCAGAAGTGGCCTCCATGAGCGGACGTGCTGGAAATACTTTCTTGTTTGTGAGCTTACTG---GAAGCAAGGTAGCCGGGGGCTTGGGAGCATGGGCTCCG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96691041 685 + 98384682 AAAGATTAAAATGAAAAATATGCATCTTCTTTAGAACATGTATTTTAATGAGTTATAATAAAGAAACGAATGTATACTGGAGATTTTTTTAAGATGACAATTGTTGCAAAATCTAACAAAGTTCCAAAAACGGTTTCAGAAATCCCTGAGCTGATCAGCGCAGTTTT------AATTGTTCAAACTACATCTAAACATACTAAATCGTACCATGAAAGCTTACCAATGTCACTTTCAGTATTTA-TAAGTATGAAGTTCAATTTATAATAAATGG-GAAATTTAAGAAATATTCCAAATTACTGCTGCATGTCAGTGTCTGTGA---ATTAACAGTT-GGAGTAAACTATGGCATTTAAACAT---TTTTCGGTAACCCACATATCCAGGAGTTAGAGATATATTTAGCTATGATGCAAACTTCTGGAGCAATTGCAAAAGAAATTCATGCTGAATCCAATACTCGAACTTAAGTTTAACCAAAGGCTCC---------ATCCCAGCATAGGTGCCGTATCCAGAGCTGCAAATCAGCCTGAGCACCAGCATTCTGGAGGCTGAGCCAGGTGCGTCGCTTTGCGCTCTACAGAGTGGTCCTATAAACACCTCCAGAAGTGGCCTCCATGAGCGGATGTGCTGGAAATACTTCCTCGTTTGTGAGCTTACTG---GAAGCAAGGTAGCCGGGGGCTTGGGGGCGTGGGCTCCA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169900000 654 + 171630274 AAAGAGGAAAAT-AAAAGTATGCATCTTCTTCATAATGCGTGTCTTAACGAACTGTAATAAAGA----AATGCGTATTGGAGCTCTTTTTAAGATGGCAATTGTTGCAAAATCTAACAGAATTCCA------GTTTCAGAAATCCCTGAGCTGATGAGTGCAGTTTC-------ATTGCTCAAACTGCACCTAAGTATAGTAAATGGTACCATGATGGTTTACCAATGTCACTTTCAATATTTT-TAAGCGTGAAGGTCAATTTACAATAAATGG-AAAATTTAAGAAATATTCTAAATTACTGCTGCATGTCC-TGTCTGTCAAT--------------GATGAACTATGGAATTGAAACGT---TTTTTGGTAATCCACGTGTCCAGGAGTTAGGGATATATTTAGCCATGATGTAAACTTTTGGAG------CAAAGGAAATTTATGCTGCATCCAACACTTGAAATTAAGTTTAACCAAAGGCTAC---------CTCCCGGCATATGTACCATACCCAGAGCAGCCAGTCAGCC-GGGCACCAGCATTCTGGAAGCGGAGCCAGGTCCACAGAGTCCTGCTCTGTAGAGTGGTCCTGTAGAAATCTCCAGAAGTGGCCTCTGTGAGCTGGCCTGCTGGAAATGCTTCCTTGTTTGTGAGGGTGCTG---GAAGCAAGGTAGCCTAGTGCTTGTGAGAGCGGG-TCCA i calJac3.chr4 C 0 I 598 s canFam3.chr1 56181513 672 + 122678785 aaatataaaaatGGAAAAGGCACATCTCTCTTAAACTACGTATTTTAATTCACTGTAGTAAAACAACACATACACGTCAGAGGTGGTTT-AAGACAGAGACTGTTGCGAAATCCAGGA------CAACAGAAATTCTGGAAACCACTGA-CTGATACGAGCAGTTTTTAAAAGAACCTTTCAAACTGCATCTAAGTAGAGTAAAGTTTACTGTGACAGTTTATAAACGTCAATTTCAACACTCGTTAAGTACAAAGTTCAATTTATAATAAATGG-AAATTTTAAGAAATATTCCAAATTGCTGCCTTGTGTTGGCATCCGTCGGCTATTAATGGTTGGGGGCAAGCAATGGCTCTGAAGCACATATTTTTGGTAACCTACGGATCCAGGAGCTA--GATATATTTAGATGTGATAGAAACTCTTGGAGCGTTAGCAGAGGAAAGCCATACTAAATCCAATACT-GAAATTAAATTTAACCAAATGCTTT---------ACCCCAGCATCTGTTTCCTATCCAGTTCAACAAATCAAACTGGTC-CTAAAATTCTAAAAA-TGAGCCAGAACCTCTTACTCATCATTTACAGGACGGTCTTCCATAAATCTCCTCGAGCGG-CTGCATAGGCTTGCCTGCTGGACAGACTTCTCCCCGGGTCTGGCCACTGTTTGAAGCAGAGCAGCA----------------GGGCACCA i canFam3.chr1 I 355 C 0 e rheMac3.chr4 168132750 16 + 169853907 I e macFas5.chr4 169087012 13 - 170955103 I a score=202097.000000 s hg38.chr6_KB021644v2_alt 114619 124 + 185823 GGGTGGGGTGGTTGCTGTGAGACCAGATGATGTCACGGAGACGCTCGGGATGTTTTTGCCCTTCCACACTCTTCACGGCCTCCCGTTTTTGCTCCTTCCATTCATAACAGCCGCAGAGATCATC s panTro4.chr6 170701885 124 + 172623881 GGGCGGGGTGGTTGCTGTGAGACCAGATGATGTCGCGGAGACGCGCGGGATGTTTTTGCCCTCCCACACTCTTCATGGCCTCCCGTTTTTGCTCCTTCCATTCGTAACAGCCGCGGAGATCATC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172456400 124 + 174210431 GGGTTGGGTAGTTGCTGTGAGACCAGATGATGTCATGGAGATGCGCAGGATGTTTTTGCCCTCCCACACTCTTCATGGCCTCCCGTTTTTGCTCCTTCCATTCGTAACAGCCGTCGAGATCATC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156312104 124 + 157873769 GGGTTGGGTGGTTGCTGTGAGACCAGATGATGTCATGGAGACGCTTGGGATGTTTTTGCCCTCCCACACTCTTCATGGCCTCCCGTTTTTGCTCCTTCCATTCGTAACAGCTGTGGAGATCATC i nomLeu3.chr3 C 0 C 0 s papAnu2.chr4 163905134 124 + 165299245 GTGTCGGGTGGTTGCTGTGAGACCAGATGATGTCATGGAGATGCTCGGGACGTTTTTGCCCTCCCGCACTCTTCATGGCCTCCCGTTTTTGCTCCTTCCATTCGTAACAGCCATGGAGGTTATC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96691726 124 + 98384682 GTGTCGGGTGGTTGCTGTGAGACCAGATGACGTCATGGTGATGCTCGGGAGGTTTTTGCCCTCCTGCACTCTTCATGGCCCCCCATTTTTGCTCCTTCCATTCGTAACAGCCATGGAGATCATC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169901252 122 + 171630274 GGGTCAGGCGGCCGCCGTGGAGCCAGATAACGTCATGGAGACGCT--GGGAGGCTTTATCCTCCCACACTCTTCTTCGCCTCCTGTTTTTGCTCCTTCCATTCGCAGCAGCCATGAAGGTCATC i calJac3.chr4 I 598 C 0 s canFam3.chr1 56182185 109 + 122678785 GGGTCAGCCGTCTG-TGTCTGCTCAG-TGATGGCA---GGAGGCCAGAG-------TGCCCT---GCGTGCCACCCAGCCTCCCTTCTCTGCCTCACCCTCTCAGGAGGGCAGTTGAAATCATC i canFam3.chr1 C 0 C 0 e rheMac3.chr4 168132750 16 + 169853907 I e macFas5.chr4 169087012 13 - 170955103 I a score=4529.000000 s hg38.chr6_KB021644v2_alt 114743 3 + 185823 TCG s panTro4.chr6 170702009 3 + 172623881 TCG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172456524 3 + 174210431 TCA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156312228 2 + 157873769 TC- i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169087025 3 - 170955103 TCA i macFas5.chr4 I 13 C 0 s papAnu2.chr4 163905258 3 + 165299245 TCA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96691850 3 + 98384682 TCA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169901374 3 + 171630274 TCA i calJac3.chr4 C 0 C 0 s canFam3.chr1 56182294 3 + 122678785 TCA i canFam3.chr1 C 0 C 0 e rheMac3.chr4 168132750 16 + 169853907 I a score=560006.000000 s hg38.chr6_KB021644v2_alt 114746 215 + 185823 ATTGTATCTAAATTGCTACACACTACGTGGCTATCCAGTCCATCTCAGTTTTGTGCAGGTCTGTTGGGTCTCCGCTCCTCAGTGCAGTGT-CCCCGAAGCCCCTTCCTTATCAACTGAAattctagagccatcgctagttgaaccttactggtttctgccttggcagagctgggtgaccttaggcaagacaattaatcatcgtatgcttcagtttc s panTro4.chr6 170702012 215 + 172623881 ATTATATCTAAATTGCTACACACTACGTGGCTATCCAGTCCATCTCAGTTTTGTGCAGGTCTGTTGGGTCTCCGCTCCTCAGTGCAGTGT-CCCCGAAGCCCCTTCCTTATCAACTGAAattctagagccatcgctagttgaaccttactggtttctgccttgggagagctgggtgaccttaggcaagacaattaatcatcgtatgcttcagtttc i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172456527 215 + 174210431 ATGGTATCTAAATTGCTACACACTACATGGTTATCCAGTCCATCTCAGTTTTGTGCAGGTCTGTTGGGTCTCCACTCCTCAGTGCAGTGT-CCCCGAAGCCCCTTCCTTATCAACTGAAattctagagccattgctagttgaacctcactggtttctgccttgtgagagctgggtgaccttaggcaagataattaatcattgtatgcttcagtttc i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156312230 215 + 157873769 ATTGTATCTAAATTGCTACACACTACATGCCTATCCAGTCCATCTCAGTTTTGTGCAGGTCTGTTGGGTCTCCGCTCCTCGGTGCAGTGT-CTCTGGAGCCCCTTCCTTATCCACTGAAattctagagccatcgctagttgaacctcactggtttctgccttgtgagaactgggtgaccttaggcaagataatttatcattgtatgcttcagtttc i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168132766 212 + 169853907 ATTGTATCTAAATTGCTGCACACTACGTGGCTATGCAGTCCATCTCAGTTTTGTGCAGGTCCGTTGG---TCCGCTCCTCAGTAAAGTGC-CCATGAAGCCCCTTCCCTATCAACTGAAattctagagccattgctagttgaacctcactggtttctgccttgtgagagctgggtgaccttaggcaagataattaatcattgtatacttcagtttc i rheMac3.chr4 I 16 C 0 s macFas5.chr4 169087028 212 - 170955103 ATTGTATCTAAATTGCTGCACACTACGTGGCTATGCAGTCCATCTCAGTTTTGTGCAGGTCCGTTGG---TCCGCTCCTCAGTAAAGTGC-CCATGAAGCCCCTTCCCTATCAACTGAAattctagagccattgctagttgaacctcactggtttctgccttgtgagagctgggtgaccttaggcaagataattaatcattgtatacttcagtttc i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163905261 215 + 165299245 ATTGTATCTAAACTGCTGCACACTACATGGCTATCCAGTCCATCTCAGTTTTGTGCAAGTCTGTTGGGTCTCCGCTCCTCGGTGCAGTGC-CCCCGAAGCATCTTCCTTATCAACTGAAATTCTAGAGCCATTGCTAGTTGAACTTCACTGGTTTCTGCCTTGGGAGagctgggtgacctcaggcaagaTAATTAATCATTGTATGCTTCAGTTTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96691853 211 + 98384682 GTTGTGTCTAAGTTGCTGCACACTGCATGGCTATCCAGTCCATCTCAGTTGTGTGCAAGTCTGTTGGGTCTGCGTTCCTTGGTGCAGTGC-CCCCGAAGCCCCTTCCTTATCAACTGAAattctagagccattgctagttgaacctcactggtttctgccttgggagagctgggtgacctcaggcaaga----taatcattgtctacttcagtttc i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169901377 192 + 171630274 ATTGTGTCTACG-TGCTGCACACGACAGGGCCAGACAGTCAACCCCAGCTCTGTGCAGGTTTTCTGGGTCCCAGCTCCCCGGTGCAGCGTGGCCCAAAGCCCCTTCCT----GACTGAAATTCTGCAGCCAT----------------CTAGTTTCTGCCTTGTGAGA-CTGGGTGACCTT-GGCAAGGTGACTGATCATTGTATGCTGCA-TTTC i calJac3.chr4 C 0 C 0 s canFam3.chr1 56182297 151 + 122678785 TTTGTACTGAAATTGCTG---------TGGC------------ATCAGTT-TGTGGAGGATCTGTGGACCCCACCTCC-------AGCCT-------GGCCCCTCCAG----CACAGCCATGCTAGAGCT-CGGGTGATCAGACCT-----------------------ctgtgtca-cttgggcacagtgattaatcattctgtgccttggtttc i canFam3.chr1 C 0 I 38 a score=171223.000000 s hg38.chr6_KB021644v2_alt 114961 57 + 185823 tgcaatattacctatgtcataggtttattgttttgtcaaagatttaaatgaatacat s panTro4.chr6 170702227 57 + 172623881 tgcaatattacctatgtcataggtttattgttttgtcaaagatttaaatgaatacat i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172456742 57 + 174210431 tgcaatattacctatgtcataggcttattgttttgtcaaagatttaaatggatacat i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156312445 57 + 157873769 tgcaatattacctatgtcataggtttattgttttgtcaaagatttaaatgaatacat i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168132978 57 + 169853907 tgcaatattacctatgtcataggtttattgttttgtcaaagatgtaaatgaatacat i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169087240 57 - 170955103 tgcaatattacctatgtcataggtttattgttttgtcaaagatgtaaatgaatacat i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163905476 57 + 165299245 TGCAATATTACCTATGTCATAGGTTTATTGTTTTGTCAAAGATGTAAATGAGTACAT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96692064 57 + 98384682 tgcaatattacctgtgtcataggtttattgttttgtcaaagatgtaaatgaatacat i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169901569 56 + 171630274 TGCAGTATTGTCTGCATCACAGGTTTATTGTTTTGTCAAAGAT-TAAATGAATATGT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56182448 38 + 122678785 I a score=1843165.000000 s hg38.chr6_KB021644v2_alt 115018 644 + 185823 taaggatgtataaagaaattaggatagtgtctagcattcaaaagtgctGGCTGTTGTCAAAGTTACTCTTTTCATTTTTAATATAAAAATGGCGTGCGTGTTATAGGAGACAGATGTGGGGGAGTG----CAGGTGAGCAGGG--AGCTGTTG------TCTTGGGAATTCGTTTCTCATCTCTGCAGTCTTTGA-GGAAGAGAAGCTGAGACGTGGAGCCTGGATTTTCCTCTGTGGTCTGCAAACA----TTCAGCGCTTCTCTAAGCTCCCATAGCTGTTGTATTTGCTATTAAATGACCTAAAATTTGCTGGTAGTTTGTTTTGACTGTTTCCTCGTTTGGGGGCTCATTTTTGCATTTCCA--AGGGTATATATGAGCTTCCTTCCTCCCTGAGAG---------CAAACACTTA---TTCTTCCGTGAAA---CATCCACT------------------------------GTTCATCGCAGCGGTGGGCA---TGCAGAGCGCAGCTCAGTCTCATTGAGGGGGTTGTTCCAACTGAGTTCAGTGACCACTGAGGGCTTAGCAAGATCTTAGGAACTAGACTCAAGGTCAAAGGGCTTCCCAGCTATCCAGGAGCTCCTTTAGAGAAGAACCTAAAATATTTGTATGCCATTAGTGTTTCCCTAGCTTAGTTTTTGGCTGATTGTCCTGAATAGTCTATAATTG s panTro4.chr6 170702284 644 + 172623881 taaggatgtataaagaaattaggatagtgtctagcattcaaaagtgttggctgttgtCAAAGTTACTCTTTTCATTTTTAATATAAAAATGGCGTGGGTGTTATAGGAGACAGATGTGGGGGAGTG----CAGGTGAGCAGGG--AGCTGTTG------TCTTGGGAATTCGTTTCTCATCTCTGCAGTCTTTGA-GGAAGAGAAGCTGAGACGTGGAGCCTGGATTTTCCTCTGTGGTCTGCAAACA----TTCAGCGCTTCTCTAAGCTCCCATAGCTGTTGTATTTGCTATTAAATGACCTAAAATTTGCTGGTAGTTTGTTTTGACTGTTTCCTCATTTGGGGGCTCATTTTTGCATTTCTG--AGGGTATATATGAGCTTCCTTCCTCCTTGAGAG---------CAAACACTTA---TTCTTCCGTGAAA---CATCCACT------------------------------GTTCATCGCAGCGGTGGGCA---TGCAGAGCGCAGCTCAGTCTCATTGAGGGGGTTGTTCCAACTGAGTTCAGTGACCACTGAGGGCTTAGCAAGATCTTAGGAACTAGACTCAAGGTCAAAGGGCTTCCCAGCTATCCAGGACCTCCTTTAGAGAAGAACCTAAAATATTTGTATGCCATTAGTGTTTCCCTAGCTTAGTTTTTGGCTGATTGTCCTGAATAGTCTATAACTG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172456799 644 + 174210431 taaggatgtataaagaaattaggatagtgtctagcattcaaaagtgctGGCTGTTGTCAAAGTTACTCTTTTCATTTTTAATATAAAAATGACATGGGTGTTACAGGAGACAGATGTGGGGGAGTA----CAGGTGAGCAGGG--AGCTGTTG------TCTTGGGAATTCGTTTCTCATCTCTGCAGTGTTTGA-GGAAGAGAAGCTGAGACGTGGAGCCTGGATTTTCCTCTGTGGTCTGCGAACA----TTCAGTGCTTCTCTAAGCTCCCATAGCTGTTGTATTTGCTACTAAATTTCCTAAAATTTGCTGGTAGTTTGTCTTGACTGTTTTCTCATGTGGGGGCTCATTTTTGCCTTTCTG--TGGGTGTATATGAGCTTCCTTCCTTCTTGAGAG---------CAAACACTTA---TTCTTCTGTGAAA---CATCCACC------------------------------GTTCAGCGCAGCGATGGGCA---TGCAGAGCGCAGCTCAGTCTCGTTGAGGGGGTTGTTCCAACTGAGTTCAGTGACCACTGAGGGCTTAGCAAGATCTTAGGAGCTAGACTCAAGGTCAAAGGGCTTCCCAGCTATCCAGGAGCTCCTTTAGAGAAGAGCCTAAAATATTTGTATGCCCTTAGTGTTTCCCTGGCTTAGTTTTTGGCTGACTGTCCTGAATAGTCTATAATTG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156312502 640 + 157873769 taaggctgtataaagaaattaggagagtgtccagcattcaaaagtgctGGCTGTTGTCAAAGTTACTCTTTTCATTTTTAATATAAAAATGATGTCGGTGTTACAGGAGACAGATGTGGGGGAGTG----CAGGTGAGCAGGG--AGCTGTTG------TCTTGGGATTTTGTTTCTCATCTCTGCAGTCTTTGA-GGAAGAGAAGCCCAGACCTGGAGCCTGGATTTCCCTCTGTGGTCTGCGAACA----TTCAGCGCTTCTCTAAGCTCCCATAGCTGTTGTATTTGCTATTAAATTACCTAAAATTTGCTGGTAGTTTGTCTTGACTGTTTCCTCATTTGGGGGCTCATTTTTGCCTTTCTG--AGGGCGTATATGAGCTTCCTTCCTCCTTGAGAG---------CAAATA---A---TTATTCCGTGAAA---CATCCACT------------------------------GTTCAGTGCAGCGATGGGCA---TGCAGAGCACAGCTCAGACTCATTGAGGGGGTTGTTCCAACTGAGTTCAGTGACCACTGAGGGCTTAGCAAGATCTTAGGAACTAGACTCAAGGTCAAAGGGCTT-CCAGCTATCCAGGAGCTCCTTTAGATGACAACCTAAAATATTTGTATGCCCTTAGTGTTTCCCTAGCTTAGCTTTTGGCTGATTGCCCTGAATAGTCTATAATTG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168133035 644 + 169853907 taaggatatataaagaaatcaggatagtgtctagcattcaaaagtgctGGCTGTTGTCAAAGTTACTCTTTTCATTTTTAATATAAAAATGATGTGGGTGTTACAGGAGACAGATGTGGGGGAGTG----CAGGTGAGCAGAG--AACTGTTG------TCTCGGGAATTCGTTTCTCATCTCTGCAGTCGTTGA-GGAAGAGAAGCTGAGACGTGGAGCCTGGATGTTCCTCTGTGGTCTGCAAACG----TTCAGCGCTTCTCTAAGCTCCCATAGCTGTTGTATTTGCTATTAAATGACCTAAAATTTGCTGGTAGTTTGTCTTGACTGTTTCCTCGTTTGGGGTCTCCTTTTTGCCTTTCTG--AGGGTGTATATGAGCTTCTTTCCTCTTTGAGAG---------CAAACGCTTA---TTCTTCCGTGAAA---CATCCACT------------------------------GTTCAGCGCGGCGGTTGACG---TGCAGAGCGCAGCTCAAACTCATTGAGGGGGTTGTTCCGTCTGAGTTCAGTGACCACTGAAGGCTTAGCAAGATCTTAGGAGCTAGACTCAAGGTCAGAGGACTTCCTAGCTATCCAGGAGTTCCTTTAGAGGAGAACCTGAAATATTTGAATGCCCTTAGTGTTTTCCTAGCTTAGTTTTTGGCTGATCGTCCTGAATAGTCTATAATTG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169087297 644 - 170955103 taaggatatataaagaaatcaggatagtgtctagcattcaaaagtgctGGCTGTTGTCAAAGTTACTCTTTTCATTTTTAATATAAAAATGATGTGGGTGTTACAGGAGACAGATGTGGGGGAGTG----CAGGTGAGCAGAG--AACTGTTG------TCTCGGGAATTCGTTTCTCATCTCTGCAGTCGTTGA-GGAAGAGAAGCTGAGACGTGGAGCCTGGATGTTCCTCTGTGGTCTGCAAACG----TTCAGCGCTTCTCTAAGCTCCCATAGCTGTTGTATTTGCTATTAAATGACCTAAAATTTGCTGGTAGTTTGTCTTGACTGTTTCCTCGTTTGGGGGCTCCTTTTTGCCTTTCTG--AGGGTGTATATGAGCTTCTTTCCTCTTTGAGAG---------CAAACGCTTA---TTCTTCCGTGAAA---CATCCACT------------------------------GTTCAGCGCGGCGGTTGACG---TGCAGAGCGCAGCTCAGACTCATTGAGGGGGTTGTTCCGTCTGAGTTCAGTGACCACTGAGGGCTTAGCAAGATCTTAGGAGCTAGACTCAAGGTCAGAGGACTTCCTAGCTATCCAGGAGTTCCTTTAGAGGAGAACCTGAAATATTTGAATGCCCTTAGTGTTTTCCTAGCTTAGTTTTTGGCTGATCGTCCTGAATAGTCTATAATTG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163905533 642 + 165299245 TAAGGATGTATAAAGAAATCAGGATAGTGTCTAGCATTCAAAAGTGCTGGCTGTTGTCAAAGttactcttttcatttttaatataaaaatgacgTGGGTGTTACAGGAGACAGATGTGGCAGAGTG----CAGGAGAGCAGAG--AACTGTTG------TCTCGGGAATTCGTTTCTCATCTCTGCAGTCGTTGA-GGAAGAGAAGCTGAGACGTGGAGCCTGGATTTTCCTCTGTGGTCTGCAAACG----TTCAGCGCTTCTCTAAGCTCCCATAGCTGTTGTATTTGCTATTAAACAACCTAAAATTTGCTGGTAGTTTGTCTTGACTGTTTCCTCTTTTGGGGGCTCCTTTTTGCCTTTCTG--AGGGTGTATATGAGCTTCCTTCCCCCTTGAGAG---------CAAACGCTTA---TTCTTCCGTGAAA---CATCCACT------------------------------GTTCAGCGTGGCGGCTGGTG---TGCAGAGCACAGCTC--ACTCATTAAGAGGGTTGTTCTGCCTGAGTTCAGTGACCACTGAGGGCTTAGCAAGATCTTAGGAGCTAGACTCAAGGTCAGAGGACTTCCCAGCTATCCACAAGCTCCTTTAGAGGAGAACCTGAAATATTTGAATGCCCTTAGTGTTTTCCTAGCTTAGTTTTTGGCTGATTGTCCTGACTAGTCTATAATTA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96692121 637 + 98384682 taaggatatataaagaaatcaggatagtgtctagcattcaaaagtgctGGCTGTTGTCAAAGTTACTCTTTTCATTTTTAATATAAAAATGATGTGGGTGTTACAGGAGACAGATGTGGGGGAGTG----CAGGTGAGCAGAG------GTTG------TCTCGGGAATTCGTTTCTCATCTCTGCAGTCATTGA-GGAAGAGAAGCTGAGATGTGGAGCCTGGATGTTCCTCTGTGGTCTGCAAACG----TTCAGCGCTTCTCTAAGCTCCCATAGCTGTTGTATTTGCTATTAAATGACCTAAAATTTGCTGGTAGTTTGTCTTGACTGTTTCCTCGTTTCGGGGCTCCTTTTTGCCTTTCTG--AGGGTGTATATGAGCTTCCTTCCCCCTTGAGAG---------CAAACATTTA---TTTTTCCATGAAA---CATCCACT------------------------------GTTCAGCGTGGCGGCTGGCG---TGCAGAGCACAGTTC--ACTCATTGAG-GGGTTGTTCCACCTGAGTTCAGTGACCACTGAGGGCTTAGCAAGATCTTAGGAGCTAGACTCAAGGTCAGAGGACTTCCCAGCTATCCAGGAGTTCCTTTAGAGGAGAACCTGAAATATTTGAATGCCCTTAGTGTTTTCCTAGCTTAGTTTTTGGCTGATTGTCCTGACTAGTCTATAATTG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169901625 661 + 171630274 TAAGGATATATAAAGAAGTCAGGGTAGTGTCGAGCATTCAAAAGTCCCGGCTGTTGTCAGAGTTACTCTTTTCATTTTCAATATGAAAATGACATGGGTGTCACAGGGGACAGGCGTGG-GCAGCG----CAGGTGAGTGGAG--AGGTGCTG------TCCTGGGAATTCCTTTCTCATCCCTGCAGTCTTTGAGGGAAGAGAAGCTGAGACCCGCACCCTGGGTTTTCCTCTGCGGTTTACAAACGTTTATTCAGTGCTTCTCTAAGCTCCCAT------------------TAAATCACCTAACGTTTGCTGGTAGGTTGTCTTGGCTGTTTCCTGGTTTGGGGGCTCATTTTTGCCTTTGCG--AGGCTGCATGTGAGCTTCCTTCCCCCTTGAGAG---------CAAAGGCTCATGCTTCTTCTGTGAAA---TGTCCACTGCTCAGCATGGTGGCGGCAAAGTGTCCACGGCTCAGCACAGCGGTGGGCA---TGCCGAGCACAGCTCAGACTCCCTGAGGGGGTTGTTCTGACTGATTTCAGTGACTGTTGAGGGTTTAGGAAGATCTTGGGGACCAGAATCAAGGCCAAGGGACTTCCCAGCTATCCAGGAGCTCCTCCAGAGGAGAACCTACAATATTTGTATGCCCTTAGTGTTTTCCTAGCT--GTTTTGGGCTGATTGCCCTGCATTCTCTATAATTG i calJac3.chr4 C 0 I 5 s canFam3.chr1 56182486 511 + 122678785 caagtacacacagatctcttagtacaacatctagcacT-GAGACTGTTGGCTACTGTCAAAATTATTATT-----------TATGGGGAAGAGGAGGGTGTGGT--GGTACAGGTTGGGTGGGGTGACCCTGGAGGAGCAAAGTCAGTGGCCAGGAGCCTCCTGGGAGCTCAGCTC-----------ATCTTTGA----------------------------------CTTTTGGAGTTTCCACAAA----TTGTGCTGTTCTCTCACCCCCTGCCACCCCTGCATTGGGGACTAAGCCACGTGG-ACTTGGTGACGGGGGCTCGTGATTATTCAT-------GGGGCTCACTTTTGCCTTTCCACCTCGGCTTGCATGAGCTTGCTTCCTCTTCGAGAGCAGGAAGACCAAAGTCTTC---TGCTTCTCTGGCATCCCGTGCACT------------------------------GCCAGCCACAGCGATAGGCACCCCGGGGGGCACTGCCC--------------GGTTCCTCACAACCAGGTGAAGGAAGTCTGGGGACTGA-------CCTGGGGGC--------------GGGTGCTTCC-----------------------------GCCTG-----------TGACTTCAGT---------------------GCTGATTATCCTGAGCGGTCTGTGAGTG i canFam3.chr1 I 38 C 0 a score=2133182.000000 s hg38.chr6_KB021644v2_alt 115662 897 + 185823 AGCCTGACAATTACTATTGCACCCTAATGTATACA--CAGCCGTTTATTCATTTATATCTTTGACGATTTCTTAATGG-AAGCCATGAACTAAGCTGGGCACTGTGCTCAGAATTAGCATAAAGAAGGCAGAGTCGAAGAACCTCACATTGTAATGAAAAAATTTGATATAAACATGTAATTAAAATAAGATTACTGCACTATATTAGAAAATATATGCAGTTAATGTTGCAAACAGAGAGGCAAGCAATGTAATCCAAGTTTCAAGAACATTTTAACTGAATAATCCTTGGTAGGGAGGCCATTCTAAGCTGAGCCGCAGAACCTTCAGAAGGCAAGGTGTGTCCGATGGCTGATGAAGGGTCTGTTGTAGCTTAAACCTGGAGCTCACAGAGGAAAGGGGGCACAAGATGACAGAGATGGGTGGATTCCATGTAGACTTATGAGCTACGGAGGAGTTCAGGCTCCAGCCTACAGACTTGACCAGATTTGAGTGTTTATAAAGAAAATCCTGGAGACAAGTAGAATGTGCTTTTGGGAACGGAGAGCTGAAATCTGAAACATCAGG---TATGCCAGTCTTTGAATGGTCTGTGTGTGAGACCATGATATCCCGTGATGTGACAC-AGGGGTCAGGGTTGCAAGGTGTGTGAGAAGCAGAA-GTCATTACTTGACGA--GCCAGTCATTTCC-ACAGCTCCCAACAAGGAGACGGAAGCTCTGCGTTTCTTAGAGCCCAGTCCTGGGTCCCATGACACACACATTTTGCTTTGGTGTAGAACGCAGAACAGTGGCCTAAAGCAAATAAAATTATTTAATATGGAAATAGTAGAATATAGACAAATTGTAGAAAATGGGGTTGATGGT-GTCTGCAGTGCTGACATATTGCGGGAATAGCGAAGATTTC s panTro4.chr6 170702928 897 + 172623881 AGCCTGACAATTACTATTGCACCCTAATGTATACA--CACCCGTTTATTCATGTATATCTTTGACGGTTTCTTAATGG-AAGCCATGAACTAAGCTGGGCACTGTGCTCAGAATTAGCATAAAGAAGGCAGAGTCGAAGAACCTCACATTGTAATGAAAAAATTTGATATAAACATGTAATTAAAATAAGATTACTGCATTATATTAGAAAATATATGCAGTTAATGTTGCAAACAGAGAGGCAAGCAATGTAATCCAAGTTTCAAGAACATTTTAACTGAATAATCCTTGGGAGGGAGGCCATTCTAAGCTGAGCCGCAGAACCTTCAGAAGGCAAGGTGTGTCCGATGGCTGATGAAGGGTCTGTTGTAGCTTAAACCTGGAGCTCACAGAGGAAAGGGGGCACAAGATGACAGAGATGGGTGGATTCCATGTAGACTTATGAGCTATGGAGGAGTTCAGGCTCCAGCCTACAGACTTGAGCAGATTTGAGTGTTTATAAAGAAAATCCTGGAGACAAGTAGAATGTGCTTTTGGGAACGGAGAGCTGAAATCTGAAACATCAGG---TATGCCAGTCTTTGAATGGTCTGTGTGTGAGACCATGATATCCCGTGATGTGACAC-AGAGGTCAGGGTTGCAAGATGTGTGAGAAGCAGAA-GTCATTACTTGATAA--GCCAATCATTTCC-ACAGCTCCCAACAAGGAGACGGAAGCTCTGCGTTTCTTAGAGCCCAGTCCTGGGTCCCATGACACACACATTTTGCTTTGGTGTAGAAGGCAGAACGGTGGCCTAAAGCAAATAAAATTATTTAATATGGAAATAGTAGAATATAGACAAATTGTAGAAAATGGGGTTGATGGT-GTCTGCAGTGCTGACGTATTGCGGAAATAGCGAAGATTTC i panTro4.chr6 C 0 I 292 s ponAbe2.chr6 172457443 897 + 174210431 AGCCTGATAATTACTATTGCACCCTAATGTATACA--CACCCGTTTATTCATTTATATCTTTGACGATTTCTTAATGG-AAGCCATGAACTAAGCTAGGCACTGTGCTCAGAATTAGCATAAAGAAGGCAGAGTCAAAGAACCTCACATTGTAATGAAAAAATTTGATATAAACATGTAATTAAAATAAGATTACTGCATTATATTAGAAAATGTATGCAGTTAACGTTGCAAACAGAGAGGCAAGCAATGTAATCCAAGTTTCAAGAATACTTTAACTGAATAATCCTTGGTAGGGAGGCCATTCTAAGCTGAGCTTCAGAACCTTCAGAAGGCAAGGTGTGTCCAATGGCTGATGAAGGGTCTGTTGTAGCTTAAACCTGGAGCTCACAGAGGAAAGGGAGCACAAGATGACAGAGATGGGTGGATTCCATGGAGACTTACAAGCTACGGAGGAGTTCAGGCTCCAGCCTACAGACTTGAGCAGATTTGAGTGTTTATAAAGAAAATCCTGGAGACAAGTAGAATGTGCTTTTGGGAACAGAGAGCTGAAATCGGAAACATCAGG---TATGCCAGTCTTTGAATGGTCTATGTGTGAGACCATGATATCCCGTGATGTGACGC-AGGGGTCAGGGTTGCAAGATGTGTGAGAAGCAGAA-GTCATTACTTGATAA--GCCAATCATTTCC-ACAGCTCCCGGCAAGGAGACAGAAGCTCTGCATTTCTTAGAGCCCTGTCCTGGGTCCCATGACACACACATTTTGCTTTGGTGTAGAATGCAGAATGGTGGCCTAAAGCAAATAAAATTATTTAATATAGAAATAGTAGAATATGGACAAATTGTATAAAATGAAGTTGATGGT-GTCTGCAGTGATGATATATTGTGGGAATAGCAAAGATTTC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156313142 886 + 157873769 AGCCTGACAATTACTATTGCACCCTAATGTATACA--CACCCGTTTATTCATTTATATCTTTGACGATTTCTTAATGG-AAGCCATGAACTAAGCTGGGCACTGTGCTCAGAATTAGCA------------AGTCGAAGAACCTCACATTGTGATGAAAAAATTTGATATAAACATGTAATTAAAATAAGATTACTGCATTATATTAGAAAATATATGCAGTTAACGTTGCAAACAGAGAGGCAAGCAATGTAATCCAAGTTTCAAGAACATTTTGACTGAATAATCCTTGGTGGGGAGGCCATTCTAAGCTGGGCTACAGAACCTCCAGAAGGCAAGGTGTGTCTGATGGCTGATGAAGGGTCTGCTGTAGCTTAAACCTGGAGCTCACTGAGGAAAGGGGGCACAAGATGACAGAGATGGGTGGATTCCATGGAGACTTATGAGCTACAGAGGAGTTCAGGCTCCAGCCTACAGACTTGAGCAGATTTGAGTGTTTATAAAGAAAATCCTGGAGACAAGTAGAATGTGCTTTTGGGAACAGAGAGCTGAAATCTGAAACATCAGG---TATGCCAGTCTTTGAATGGTCTGTGTGTGAGACCATCATATCCCATGATGTGAGGCAAGGGGTCAGGGTTGCAAGATGTGTGAGAAGCAGAA-GTCATTACTTGATAA--GCCAATCATTTCC-ACAGCTCCCAGCAAGGAGACGGAAGCTCTGCATTTCTTAGAGCCCTGTCCTGGGTCCCATGACACACACATTTTGCTTTGGTGTAGAATGCAGAACGGTGGCTTAAAGCAAATAAAATTATTTAATGTGGAAATAGTAGAATATAGACAAATTGTAGAAAATGAGGTTGATGGT-GTCTGCAGTGATGACATATTGCGGGAACAGCAAAGATTTC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168133679 898 + 169853907 AGCCTGACAATTACTGTTGCCCACTAATGTATACA--CACCCATTTATTCATTTATATCTTTGACAATTTCTTAACGG-AAGCCATGAGCTAAGCTGGGCGCTGTGCTCAGAATTCGCATAAAGAAGGTAGAGTTGAAGAACCTCACATTGCCATGCAAAAATTTGAGATAAACATGTCATTAAAATAAGATTACTGCATTATGTTAGAAAATATGTGCCTTTAACGTTGCAAACAGAGAGACAAGCAAAGTAATCCAAGTTTCAAGAACATTTTAACTGAATAATCCTTCGTAGGGAGGCCGTGCAAAGCTGAGCCGCAGAGCCTTCAGAAGACAAGCTGTGTCCG-CGGCCGAGGAAGAGTCTTTTGTAGCTTAAACCTGGAGCTCACAGAGGAAAGGGGGCACAAGATGACAGAGACGGGTGGATTCCATGGAGACCTACGAGCTACGGAGGAGTTCAGGCTCCAGACTACAGACTTGAGCAGATTTGAGTGTTTATAAAGAAAATCCTGGAGACAAGTAGAATGCGCTTTTGGGAACAGAGAGCTGAAATCGGAAACATCAGG---TATGCCAGTCTTTGAATGGTCTGTGTGTGAGACCATGATATCCCGTGATGTGACGCAGGGGGTCAGGGTTGCAAGATGTGTGAGAAGCAGAAGGTCATCACTTGATAA--GCCAATCATTTCC-ACAGCTCCCAGCAAGGAGGCGGAAGCTCTGCGTTTCCTAAAGTCCAGTTCTGGGCCCCATGACACACACATTTTGCCATGGTGTAGAACGCAGAACGGTGGCCTAAAGCAAATAAAATTATTTAATATAGAAATAGTAGAATATAGACAAATTGTAGAAAATGAGGTTGATGGT-GTCTGCAATGATGACATATTGCAGGAATACTAAAGATTTC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169087941 898 - 170955103 AGCCTGACAATTACTGTTGCCCACTAATGTATACA--CACCCATTTATTCATTTATATCTTTGACAATTTCTTAACGG-AAGCCATAAGCTAAGCTGGGCGCTGTGCTCAGAATTCGCATAAAGAAGGTAGAGTTGAAGAACCTCACATTGCCATGCAAAAATTTGAGATAAACATGTCATTAAAATAAGATTACTGCATTATGTTAGAAAATATGTGCCTTTAACGTTGCAAACAGAGAGACAAGCAAAGTAATCCATGTTTCAAGAACATTTTAACTGAATAATCCTTCGTAGGGAGGCCGTGCAAAGCTGAGCCGCAGAGCCTTCAGAAGACAAGCTGTGTCCGACGGCCGAGGAAGAGTCTTTTGTAGCTTAAACCTGGAGCTCACAGAGGAAAGGGGGCACAAGATGACAGAGACGGGTGGATTCCATGGAGACTTACGAGCTACGGAGGAGTTCAGGCTCCAGACTACAGACTTGAGCAGATTTGAGTGTTTATAAAGAAAATCCTGGAGACAAGTAGAATGTGCTTTTGGGAACAGAGAGCTGAAATCTGAAACATCAGG---TATGCCAGTCTTTGAATGGTCTGTGTGTGAGACCATGATATCCCATGATGTGACGCAGGGGGTCAGGGTTGCAAGATGTGTGAGAAGCAGAA-GTCATCACTTGATAA--GCCAATCATTTCC-ACAGCTCCCAGCAAGGAGGCGGAAGCTCTGCGTTTCCTAGAGTCCAGTTCTGGGCCCCATGACACACACATTTTGCCATGGTGTAGAACGCAGAACGGTGGCCTAAAGCAAATAAAATTATTTAATATAGAAATAGTAGAATATAGACAAATTGTAGAAAATGAGGTTGATGGT-GTCTGCAATGATGACATATTGCAGGAATACTAAAGATTTC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163906175 897 + 165299245 AGCCTGACAATTACTGTTGCCCACTAATGTACACa--cacccatttattcatttatatcttTGACAATTTCTTAAAGG-AAGCCATGAGTTAAGCTCGGCGCTGTTCTCAGAATTCCCATAAAGAAGGTAGAGTTGAAGAACCTCACACTGCCATGCAAAAATTTGACATAAACATGTCATTAAAATAAGATTACTGCATTATGTTAGAAAATATGTGCCGTTAACATTGCAAACAGAGAGACAAGCAATGTAATCCAAGTTTCAAGAACATTTTAACTGAATAATCCTTGGTAGGGAGGCCGTGCTAAGCTGAGCCGCAGAGCCTTCAGAAGACAAGCTGTGTCCGACGGCCGAGGAAGAGTCTTTTGTAGCTTAAACCTGGAGCTCACAGAGGAAAGGGGGCACAAGATGACAGAGACGGGTGGATTCCATGGAGACTTATGAGCTACGGAGGAGTTCAGGCTCCAGACTACAGACTTGAGCAGATTTGAGtgtttataaagaaaatcctGGAGACAAGTAGAATGTGCTTTTGGGAACAGAGAGCTGAAATCTGAAACATCAGG---TAC-CCAGTCTTTGAATGGTCTGTGTGTGAGACCATGATATCCCGTGATGTGACGCAGGGGGTCAGGGTTGCAAGATGTGTGAGAAGCAGAA-GTCATCACTTGATAA--GCCAACCATTTCC-ACAGCTCCCAGCAAGGAGGCGGAAGCTCTGCGTTTCCTAGAGTCCAGTTCTGGGCCCCATGACACACACATTTTGCCATGGTGTAGAACGCAGGACGGTGGcctaaagcaaataaaattatttaatatagaaATAGTAGAATATAGACAAATTGTAGAAAATGAGGTTGATTGT-GTCTGCAATGATGACATATTGCAGGAATAGTAAAGATTTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96692758 899 + 98384682 AGCCTGACAATCACTGTTGCCCACTAATGTATACA--CACTCATTTATTCATTCATATCTTTGACAGTTTCTTAACGGTAAGCCATGAGCTCAGCTGGGCGCTGTGCTCAGAATTCGCCTAAAGAAGGTAAAGTCGAAAAACCTCACATTGCCATGCAAAAATTTGAGATAAACGTGCCATTAAAATAAGATTACTGCATTATGTTAGAAAATATGTGCCGTTAACGTTGCAAACAGAGAGACAAGCAATGTAATCCAAGTTTCAAGAACATTTTAACTGAATAATCCTTGGTAGAGAGGCCGTGCTAAGCTGAGCCGCAGAGCCTTCAGAAGACAAGCTGTGTCCGACGGCCGAGGAAGAGTCTTTTGTAGCTTAAACCTGGAGCTCACAGAGGAAAGGGGCCACAAGATGACAGAGACGGGTGGATTCCATGGAGACTTACGAGCTACGGAGGAGttcaggctccagactacagacttgagcagatttgagtatttataaagaaaatcctggagacaaatagaatgtgcttctgggaacagagagctgaaatctGAAACATCAGG---TATGCCAGTCTTTGAATGGTCTGTGTGTGAGACCATGATACCCCACGATGTGACGCAGGGGGTCAGGGTTGCAAGATGTGTGAGAAGCAGAA-GTCATCACTTGATAA--GCCAATCATTTCC-ACAGCTCCCAGCAAGGAGGTGGAAGCTCTGTGTTTCTTAGAGTCCAGTTCTGGGCCCCATGACACACACATTTTGCCATGGTGTAGAACGCAGAACGGTGGCCTAAAGCAAATAAAATTATTTAATATAGAAATAGTAGAATATAGACAAATTGTAGAAAATGAGGTTGATTGT-GTCTGCAATGATGACATATTTCAGGAATAGTAAAGATTTC i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56182997 605 + 122678785 GGCCTGCCAATCACTCACACTCTCCAGT-TACACAGTCATTCGTGTCTTCCCTAATTTCTCTGCCCATTTCTTTATTG-TGGTCCTGCACCAAGTGAGGCCCTGTGCCCGGAACCAGCGTGAATGAGGTGGA----------CTTGCTTTGTCA-----------GATGCAGATGTGTCATTACAATAAG---ACTGTGTTGTACAGGAATATGTGCACGGT--GCTTTGAAACCAGAGAAGCCAGCAATTCAATGGGTGTTTCAGGGAC---------------TCC----------------------CTAAGCGACAG-------------------------------CGACGGAGAG--CTCTGTGGC----------------------------------AGGTAACAG--------------------------------------------------------------------------------------------TCCTGGAG------GGCGTGCTCACCTGGCAGCAGGG---TGGAGCATG--GCGTCAGGGCCCGTGGCAGCTGTGTGATGGTCTGGGTGGGAG-----------------TGTGACGT-----------------------------GGTACAA-GTCATCATTTTGTAGCCACCACCTGGTTCCAACAGCAGCCAGTAACGGGG-AGAAGCTCTG-GCTCCTTCACGTCCTTTCCGG------------CTGGCGGCTTGC---GACCTAGA---CAGGATGGTGGCCCAAAGCACATGTGGTT-CCCAACACAAGAAAGGGAGAAAGTGGACAGGTTCTAGAAAATGAGGCTTATGGCGGTCTGTAATCATGATATACTGGGGGGTTGGAAAGAATTC- i canFam3.chr1 C 0 C 0 e calJac3.chr4 169902286 5 + 171630274 I a score=164749.000000 s hg38.chr6_KB021644v2_alt 116559 60 + 185823 CAGAAGAAGAATTCCAAGTTTCCAATAAGAAACTTATTAGCCCATCTATAACAATCAAAT s panTro4.chr6 170704117 60 + 172623881 CAGAAGAAGAATTCCAAGTTTCCAATAAGAAACTTATTAGCCCATCTATAACAATCAAAT i panTro4.chr6 I 292 C 0 s ponAbe2.chr6 172458340 60 + 174210431 TAGAAGAAGAATTCCAAGTATCCAATAAGAAACTTATTGGCCCATCTATAACAATCAAAT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156314028 57 + 157873769 ---TAGAAGAACTCCAAGTATCCAATGAGAAACTCATTGGCCCATCTATAACAATCAAAT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168134577 60 + 169853907 TAGAAGGACAATTCCAAGTATCCAATAAGAAACTTATTGGTCCATCTATAACAATCAAAT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169088839 60 - 170955103 TAGAAGGACAATTCCAAGTATCCAATAAGAAACTTATTGGTCCATCTATAACAATCAAAT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163907072 60 + 165299245 TAGAAGAAGAATTCCAAGTTTCCAATAAGAAACTTATTGGCCCATCTATAACAATCAAAT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96693657 60 + 98384682 TGGAAGAACAATTCCAAGTATCCAATAAGAAACTTATTGGCCCATCTATAACAATCAAAT i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56183602 60 + 122678785 TAGAAGAATAAAGCCAGGTATCCAATAAGAAATTTATTGCTCCATGGATAGCAATCACAT i canFam3.chr1 C 0 C 0 e calJac3.chr4 169902286 5 + 171630274 I a score=624376.000000 s hg38.chr6_KB021644v2_alt 116619 264 + 185823 ACTTCAGTTTTAATTGT-AAAAATATTCACGATGTTGTAATAATGCTTTATTTCATGTAAACATGCAAGAAAAAATCTTTTGTAGGAGCCATGAGTTCTATGTAGCAAAATGTACTGTGAGTCTAATAGGTACAAGCCTAGGCTCCAATGAAAAGTATTTATCACGCTCCTAAAACAATTGATGTTTCCCAGAACATAAACCATAAACTCCACA-TTTTTATTTTATCATGGCACAGTGGAAAAGGGGGTGGCATATTCCAAATAC s panTro4.chr6 170704177 264 + 172623881 ACTTCAGTTTTAATTGT-AAAAATATTCACGATGTTGTAATAATGCTTTATTTCATGTAAACATGCAAGAAAAAATCTTTTGTAGGAGCCATGAGTTCTATGTAGCAAAATGTACTGTGAGTCTAATAGGTACAAGCCTAGGCTCCAATGAAAAGTATTTATCACGCTCCTAAAACAATTGATGTTTCCCAGAACATAAACCATAAACTCCACA-TTTTTATTTTATCATGGCACAGTGGAAAAGGGGGTGGCATATTCCAAATAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172458400 265 + 174210431 ACTTCAGTTTTAATTGTAAAAAATATTCACGATGTTGTAATAATGCTTTATTTCATGTAAACATGCAAGAAAAAACCTTTTGTAGGAGCCATGAGTTTTATGTAGCAAAATGTACTGTGAGTCTAATAGGAACAAGCCTAGGCTCCAATGAAAAGTATTTATCATGCTCCTAAAACAATTGATGTTTCCCAGAACATAAACCATGAACTCCACA-TTTTTATTTTATCATGGAACAGTGGAAAAGGGGGTGGCATATTCCAAATAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156314085 265 + 157873769 ACTTCAGTTTTAATTGTAAAAAATATTCACGATGTTGTGATAATGCTTTATTTCATGTAAACATGCAAGAAAAAACCCTTTGTAGGAGCCATGAGTTTTCTGTAGCAAAACGTACTGTGAGTCCGATAGGCACAAGCCTAGTCTCCAATGAAAAGTATTTATCATGCTCCTAAAACGATTGATGTTTCCCAGAACATAAACCATAAAGTCCACA-TTTTTATTTTATCATGGCACAGTGGAAAAGGGGGTGGCATATTCCTAATAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168134637 264 + 169853907 ACTTCAGTTTTAATTGT-AAAAAAATTCACGATGTTGTAATAATGCTTTATTTCATGTAAACATGCAAGAAAAAACCTTTTGTAGGAGTCCAGAGTTTTATGTAGCAAAATGTTCTAAGAGTCTGATAGGAACAAACCTAGGCTCCAATGAAAAGTATTTATCATGCTCCTAAAACAATCAATATTTCCCAGAACATAAACCATGAGCTCCGCA-TTTTTATTTTCTCATGGCACAGTGGAAAAGGGGGTGGCATATTCCAAATAC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169088899 264 - 170955103 ACTTCAGTTTTAATTGT-AAAAAAATTCACGATGTTGTAATAATGCTTTATTTCATGTAAACATGCAAGAAAAAACCTTTTGTAGGAGTCCAGAGTTTTATGTAGCAAAATGTTCTAAGAGTCTGATAGGAACAAACCTAGGCTCCAATGAAAAGTATTTATCATGCTCCTAAAACAATCAATATTTCCCAGAACATAAACCATGAGCTCCGCA-TTTTTATTTTATCATGGCACAGTGGAAAAGGGGGTGGCATATTCCAAATAC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163907132 264 + 165299245 ACTTCagttttaattgt-aaaaaaattCACGATGTTGTAATAATGCTTTATTTCATGTAAACATGCAAGAAAAAACCTTTTGTAGGAGTCCAGAGTTTTATGTAGCAAAATGTTCTAAGAGTCTGATAGGAACAAACCTAGGCTCCAATGAAAAGTATTTATCATGCTCCTAAAACAATCAATATTTCCCAGAACATAAACCATGAGCTccgca-tttttattttatcatggcACAGTGGAAAAGGGGGTGGCATATTCCAAATAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96693717 265 + 98384682 ACTTCAGTTTTAATTGT-AAAAAAATTTACGATGTTGTAATAATGCTTTATTTCATGTAAACATGCAAGAAAAAACCTTTTGTAGGAGTCCAGAGTTTTATGTAGCAAAATGTTCTAAGAGTCTGATAGGAACAAACCTGAGCTCCAATGAAAAGTATTTATCATGCTCCTAAAACAATCAATATTTCCCAGAACATAAACCATGAGCTCCGCATTTTTTTTTTTATCATGGCACAGTGGAAAAGGGGGTGGCATATTCCAAATAC i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169902286 5 + 171630274 I e canFam3.chr1 56183662 0 + 122678785 C a score=547946.000000 s hg38.chr6_KB021644v2_alt 116883 234 + 185823 AATCTATCAAAGTTTTCCTTATTTTGTCCCATACTTACTCTGTTTTCA-TGTTAAGCCTGTG-------GAACTGTTTCCCTAGCTTTAAGAACA-TGGCAACAAAAGACGCAGGAATCAGAGGATTCTGCCCCATAACTGAAGTATGCCCTTGGCTGTGCTGCCAGGTTAAATCCACCTCACAGCATCCGGCCTCCTGTTGGGTGGACATCCACGCTTCCCCTTTTCACTATCCCGACCCCA s panTro4.chr6 170704441 234 + 172623881 AATCTATCAAAGTTTTCCTTATTTTGTCCCATACTTACTCTGTTTTCA-TGTTAAGCCTGTC-------GAACTGTTTCCCTAGCTTTAAGAACA-TGGCAACAAAAGACGCAGGAATCAGAGGATTCTGCCCCATAACTGAAGTATGCCCTTGGCTGTGCTGCCAGGTTAAATCCACCTCACAGCATCCGGCCTCCTGTTGGGTGGACATCCACGCTTCCCCTTTTCACTATCCCGACCCCA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172458665 234 + 174210431 AATCTATCAAAGTTTTCCTTATTTTGTCCCATACTTACTCTTTTTTCA-TGTTAAGGCTGTC-------AAACTGTTTCCCTAGCTTTAAGAACA-TGGCAACAAAAGACGCGGGAATCACAGGATTCTGCCCCATAACTGAAGCATGCCCTTGGCTGTGCAGCCAGGTTAAATCCATCTCACAGCACCCAGCCTCCTGTTGGGTGGACATCCACACTTCCCCTTTTCACTATCCCAACCCCA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156314350 233 + 157873769 AATCTAT-AAAGTTTTCCTTATTTTGTCCCATACTTACTCTTTTTTCA-TGTTAAGCCTGTC-------AAACTGTTTCCCTAGCTTTGAGAACA-TGGCAACAAAAGACACAGGAATCAGAGGATTCTGCCCCATAACTGAAGTATGCCCTTGGCTGTGCAGCAAGGTTAAGTCCATCTCACAGTACCCGGCCTCCTTTTGGGTGGACATCCATGCTTCCCCTTTTCACTATCCCGACCCCA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168134901 242 + 169853907 AATCTATCAAAGTTTTCCTTATTTTGTCCCATATTTACTCTTTTTTTCTTGTAAAGCCTGTCAAGGCTTGAACTGTTTCCCTAGCTTTAAGAACA-TGGCAATAAAAGACGCAGGAATCAGAGGATTCTGCCCCATGACTGAAGTATGCTCTTGGCTGTGCAGCCAGGTTAAATCCATCTCACAGTGCCCGGCATCCTGCTGGGTGGACATCCACGCTTCCCCTTTTCACTGTCCCGACCCCA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169089163 242 - 170955103 AATCTATCAAAGTTTTCCTTATTTTGTCCCATATTTACTCTTTTTTTCTTGTAAAGCCTGTCAAGGCTTGAACTGTTTCCCTAGCTTTAAGAACA-TGGCAATAAAAGACGCAGGAATCAGAGGATTCTGCCCCATGACTGAAGTATGCTCTTGGCTGTGCAGCCAGGTTAAATCCATCTCACAGTGCCCGGCATCCTGCTGGGTGGACATCCACGCTTCCCCTTTTCACTGTCCCGACCCCA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163907396 241 + 165299245 AACCTATCAAAGTGTTCCTTATTTTGTCCcatatttgctcttttttta-tgTGAAGCCTGTCAAGGCTGGAACTGTTTCCCTAGCTTTAAGAACA-TGGCAATAAAAGTCGCAGGAATCAGAGGATTCTGCCCCATGACTGAAGTATGCTCTTGGCTGTGCAGCCAGGTTAAATCCATCTCACAGCACCCGGGATCCTGCTGGGTGGACATCCACACTTCCCCTTTTCACTATCCCGACCCCA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96693982 242 + 98384682 AATTTATCAAAGTGTTCCTTATTTTGTCCCATATTTGCTCTTTTTTTCATGTAAAGCCTGTCAAGGCTTGAACTGTTTCCCTAGTTTTAAGAACA-TGGCAATAAAAGACGCAGGAATCAGAGGATTCTGCCCCATGACTGAAGTATGCTCTTGGCTGTGCAGCCAGGTTAAATCCATCTCACACCGCCCGGCATCCTGTTGGGTGGACATCCACACTTCCCCTTTTCACTGTCCCAACCCCA i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56183662 226 + 122678785 AGCCCACCGAACTCCTCCTGGTTCTG-CCCACGCAGACTCGCTGTCTGGCGTTGAGTCTGCCCTGAGTGAGGCCTGTTCAGTGATGGTGAGAACATTGGCCGTCGAGGGCGCAGGGCTCCGTGGATTGGGCCCCAGGACCAAG----ACCGACAGCTGAGCTGCTGGACTGAAT--GATCCAGAGTGTCCTGTGCAGCACAGGGCAG-------CACCTGTTCCCATCACCAGCAC--CCCC- i canFam3.chr1 C 0 C 0 e calJac3.chr4 169902286 5 + 171630274 I a score=40356.000000 s hg38.chr6_KB021644v2_alt 117117 21 + 185823 CCCTAAATACTTGTTTTCGGA s panTro4.chr6 170704675 21 + 172623881 CCCTAAATACTTGTTTTCGGA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172458899 21 + 174210431 CCCTAAATACTCGGTTTCGGA i ponAbe2.chr6 C 0 I 195 s nomLeu3.chr3 156314583 21 + 157873769 CCCTAAATACTTGGTTTCGGA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168135143 21 + 169853907 CACTAAGAACTTGGTTTCGGA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169089405 21 - 170955103 CCCTAAGTACTTGGTTTCGGA i macFas5.chr4 C 0 C 0 s chlSab2.chr13 96694224 21 + 98384682 CCCTAAGTACTTGGTTTCGGA i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56183888 21 + 122678785 TGCCAAATACCTGATTCTGGG i canFam3.chr1 C 0 C 0 e calJac3.chr4 169902286 5 + 171630274 I e papAnu2.chr4 163907637 0 + 165299245 C a score=69504.000000 s hg38.chr6_KB021644v2_alt 117138 36 + 185823 GTTGGCCGTGTCAAGCCTTGACTTACACTAGAAGGG s panTro4.chr6 170704696 36 + 172623881 GTTGGCCGTGTCAAGCCTTGACTTACACTAGAAGGG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172459115 36 + 174210431 GTTGGCCGTGTCAAGCCTTGACTTACACTAGAAGGG i ponAbe2.chr6 I 195 C 0 s nomLeu3.chr3 156314604 36 + 157873769 GTTGGCCGGGTCAAGCCTTGACTTACGCTAGAAGGG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168135164 36 + 169853907 GTTGACCGTGTCAAGCCTTGACTTGCACTAGAAGGG i rheMac3.chr4 C 0 I 6 s macFas5.chr4 169089426 36 - 170955103 GTTGACCGTGTCAAGCCTTGACTTGCACTAGAAGGG i macFas5.chr4 C 0 C 0 s chlSab2.chr13 96694245 36 + 98384682 GTTGACCGCGTCAAGCCATGACTTGCACTAGAAGGG i chlSab2.chr13 C 0 I 6 s canFam3.chr1 56183909 35 + 122678785 GGAGGCAATGTC-AGACGGGACTTACACAGGAGGTA i canFam3.chr1 C 0 C 0 e calJac3.chr4 169902286 5 + 171630274 I e papAnu2.chr4 163907637 0 + 165299245 C a score=5567.000000 s hg38.chr6_KB021644v2_alt 117174 6 + 185823 TTACTC s panTro4.chr6 170704732 6 + 172623881 TTACTC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172459151 6 + 174210431 TTACTC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156314640 6 + 157873769 ACACTC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169089462 6 - 170955103 ACACTC i macFas5.chr4 C 0 T 63 s canFam3.chr1 56183944 6 + 122678785 ATACTC i canFam3.chr1 C 0 C 0 e calJac3.chr4 169902286 5 + 171630274 I e chlSab2.chr13 96694281 6 + 98384682 I e papAnu2.chr4 163907637 0 + 165299245 C e rheMac3.chr4 168135200 6 + 169853907 I a score=910.000000 s hg38.chr6_KB021644v2_alt 117180 1 + 185823 T s panTro4.chr6 170704738 1 + 172623881 T i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172459157 1 + 174210431 T i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156314646 1 + 157873769 T i nomLeu3.chr3 C 0 C 0 s canFam3.chr1 56183950 1 + 122678785 T i canFam3.chr1 C 0 I 60 e calJac3.chr4 169902286 5 + 171630274 I e chlSab2.chr13 96694281 6 + 98384682 I e papAnu2.chr4 163907637 0 + 165299245 C e rheMac3.chr4 168135200 6 + 169853907 I e macFas5.chr4 169089468 63 - 170955103 T a score=27238.000000 s hg38.chr6_KB021644v2_alt 117181 61 + 185823 TCCCTAAATACTTCATTTCGGGTTTGGCCGTGTCAA-----GACTTACGCTAGACGGGATGCTCTT s panTro4.chr6 170704739 61 + 172623881 TCCCTAAATACTTCATTTCGGGTTTGGCCGTGTCAA-----GACTTACGCTAGACGGGATGCTCTT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172459158 66 + 174210431 TCCCTAAATACTTCATTTCGGAGTTGGCCTGGTCAAGCCTTGACTTACACTAGACAGGATACTCTT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156314647 66 + 157873769 TCCCTAAATACTTGGTTTCGGAGTTGGCCGGGTCAAGCCTTGACTTACGCTAGACGAGACACTCTT i nomLeu3.chr3 C 0 C 0 e calJac3.chr4 169902286 5 + 171630274 I e canFam3.chr1 56183951 60 + 122678785 I e chlSab2.chr13 96694281 6 + 98384682 I e papAnu2.chr4 163907637 0 + 165299245 C e rheMac3.chr4 168135200 6 + 169853907 I e macFas5.chr4 169089468 63 - 170955103 T a score=80775.000000 s hg38.chr6_KB021644v2_alt 117242 63 + 185823 CCCTAAATACTTGGTTTCGGAGTTGGCCATGTCAAGCCTTGACTTACACTAGAAGGGTTACTC s panTro4.chr6 170704800 63 + 172623881 CCCTAAATACTTGGTTTCGGAGTTGGCCATGTCAAGCCTTGACTTACACTAGAAGGGTTACTC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172459224 63 + 174210431 CCCTAAATACTTGGTTTCGGAGTTGGCCATGTCAAGCCTTGACTTACACTAGAAGGGATACTC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156314713 63 + 157873769 CCCTAAATACTTGGTTTCGGAGTTGGCCGGGTCAAGCCTTGACTTACGCTAGAAGGGACACTC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169089405 63 - 170955103 CCCTAAGTACTTGGTTTCGGAGTTGACCGTGTCAAGCCTTGACTTGCACTAGAAGGGACACTC i macFas5.chr4 T 63 C 0 s papAnu2.chr4 163907637 63 + 165299245 CCCTAAGTACTTGGTTTTGGAGTTGACCGTGTCAAGCCTTGACTTACGCTAGAAGGGACACTC i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169902286 5 + 171630274 I e canFam3.chr1 56183951 60 + 122678785 I e chlSab2.chr13 96694281 6 + 98384682 I e rheMac3.chr4 168135200 6 + 169853907 I a score=1332.000000 s hg38.chr6_KB021644v2_alt 117305 2 + 185823 TT s panTro4.chr6 170704863 2 + 172623881 TT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172459287 2 + 174210431 CT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156314776 2 + 157873769 TT i nomLeu3.chr3 C 0 C 0 s papAnu2.chr4 163907700 2 + 165299245 TT i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169902286 5 + 171630274 I e canFam3.chr1 56183951 60 + 122678785 I e chlSab2.chr13 96694281 6 + 98384682 I e rheMac3.chr4 168135200 6 + 169853907 I e macFas5.chr4 169089468 0 - 170955103 C a score=1302.000000 s hg38.chr6_KB021644v2_alt 117307 1 + 185823 C s panTro4.chr6 170704865 1 + 172623881 C i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172459289 1 + 174210431 C i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156314778 1 + 157873769 C i nomLeu3.chr3 C 0 I 5603 s rheMac3.chr4 168135206 1 + 169853907 C i rheMac3.chr4 I 6 C 0 s macFas5.chr4 169089468 1 - 170955103 C i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163907702 1 + 165299245 C i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96694287 1 + 98384682 A i chlSab2.chr13 I 6 C 0 e calJac3.chr4 169902286 5 + 171630274 I e canFam3.chr1 56183951 60 + 122678785 I a score=91645.000000 s hg38.chr6_KB021644v2_alt 117308 56 + 185823 TATTGCACTCGTAGGGCAGAGAGCAGCCTATATAGACTTTGG-G-TTTTTTTAAAGGT s panTro4.chr6 170704866 57 + 172623881 TATTGCACTCGTAGGGCAGAGAGCAGCCTATGTAGACTTTGGTT-TTTTTTTAAAGGT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172459290 56 + 174210431 TATTGTACTCATAGGGCACAGAGCAGCCTATGTAGGGTTTGG-G-TTTTTTTAAAGGT i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168135207 56 + 169853907 TATTGCACTCATAGGGCACAGAGCAGCCTATGTAGAGTTTGG-A-TTTTTTTAAAGAT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169089469 56 - 170955103 TATTGCACTCATAGGGCACAGAGCAGCCTATGTAGAGTTTGG-A-TTTTTTTAAAGAT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163907703 56 + 165299245 TATTGCACTCATAGGGCACAGAGCAGTCTATGTAGAGTTTGG-A-GTTTTTTAAAGGT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96694288 57 + 98384682 TATTGCACTTATAGGGCACAGAGCAGCCTATGTAGAGTTTGG-ATTTTTTTTAAAGGT i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169902286 5 + 171630274 I e canFam3.chr1 56183951 60 + 122678785 I e nomLeu3.chr3 156314779 5603 + 157873769 I a score=872098.000000 s hg38.chr6_KB021644v2_alt 117364 490 + 185823 TTTGCTGCAGCACCTAACTTCGAAACTTTGCTT--AACTTTTGGAAGCACATGCAGTTCCTCAGAGAGATACTTAATGACTTCTAA---------AGTAGGTTGCCAATAAGGAAGAAAACCTTTAATCTATAAGGTGAAAAAGGGCCAACTGGGAGCTGGTGCTGTATCATGCCCCTGCTCTGAGATtctgggtctgttttctcatttgtcagatagagccacaggccaga-cagtgtatgtaaaagttcccttca-atctcaaataacagtgattctatgactcTAGGTTCATTTATTCTAAATCATTTCAAACTTGTTAGgagacggatttacagtgcagtccatgaagcttgaatgtga--------gctccctcagc----tgccgtctcttgcagggactcaggag--------------ggaagctggacacatgtctgtctt--------------cacggagtctggacagctctccatcccctccca----tgtcctctctgccgccattccctggtgtctggtggcatcgaaggga s panTro4.chr6 170704923 490 + 172623881 TTTGCTGCAGCACCTAACGTCGAAACTTTGCTT--AACTTTTGGAAGCACATGCAGTTCCTCAGATAGATACTTAATGACTTCTAA---------AGTAGGTTGCCAATAAGGAAGAAAACCTTTAATCTATAAGGTGAAAAAGGGCCAACTGGGAGCTGGTGCTGTATCATGCCCCTGCTCTGAGATtctgggtctgttttctcatttgtcagatagagcctcaggccaga-cagtgtatgtaaaagttcccttca-atctcaaataacagtgattctatgactcTAGGTTCATTTATTCTAAATCATTTCAAACTTGTCAGGAGACGGATTTACAGTGCAGTCCATGAAGCTTGAATGTGA--------GCTCCCTCAGC----GGCCGTCTCTTGCAGGGACTCAGGAG--------------GGAAGCTGGACACATGTCTGTCTT--------------CACGGAGTCTGGACAGCtctccatcccctccca----tgtcctctctgccgccattccctggtgtctggtggcatcgaaggga i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172459346 491 + 174210431 TTTGCTGCAGCACCTAACTTCAAAACTTTGCTT--AACTTTTGGAAGCACATGCAGTTCCTCAGATAGATACTTAATGACTTCTAA---------AGTAGGTTGCCAATAAGGAAGAAAACCTTTAATCTATAAGGTGAAAAAGGGCCAACTGGGAGCTGGTGCTCTGTCATGCCCCTGCTCTGAGATtctgggtctgttttctcatttgttagatagagcctcaggccaga-cagtgtatataaaagttcccttcacatctcaaataacagtggttctatgactctaggttcATTTATTCTAAATCATTTCAAACGTGTTCAGAGACGGATTTACAGTGCAGTCCATGAAGCTTGAATGTGA--------GCTCCCTCCGC----CGCCGTCTCTTGCAGGGACTCAAGAG--------------GGAAGCTGGACACGTGCCTGTCTT--------------CACGGAGTCTGGACAGCActccatcccctcccg----tgtcctctctgccacccttccctggtgtctggtggtattgaaggga i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168135263 488 + 169853907 TTTGCTGCAGCACCTAACTTCGAACCTTGGCTT--AACCATTGGAAGCACATGCAGTTCCTCA-ATAGATACTTAATGGCTTCTAA---------AGTAGGTTGCCAGTAAGGGAGAAAAGCTTTCATCTATAAGGTGAAAAAGGGCCAACTGGGATCTGGGGCTCCATCATCCCCCTGCTCTGAGATTCTAGGTCTGTTTTCTCTTTCGTCAGACAGAGGCTCAGGCCAGA-CAGTGTACATCAAAGTTCCCTTCACGTGTCAAATATCAGTGGTTCTGTGACTCTAGGTTCATCGATTCTAAATCATTTCAAATGTGTTCAGAGACAGATTTACAGCGCAGTCCACGAAGCTTGAATGTGA--------GCTCCCTCGGC----GGCCATCTCTTGCAGGGACTCAGGAG--------------GGAAGCTGGACATATGTCTGTCTT--------------CAC--AGTCTGGACAGCtctctgtcccatccca----tgtcctgtctgccgcccttccctggtgtctggtggcattgaaggga i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169089525 488 - 170955103 TTTGCTGCAGCACCTAACTTCGAACCTTGGCTT--AACCATTGGAAGCACATGCAGTTCCTCA-ATAGATACTTAATGGCTTCTAA---------AGTAGGTTGCCAGTAAGGGAGAAAAGCTTTCATCTATAAGGTGAAAAAGGGCCAACTGGGATCTGGGGCTCCATCATCCCCCTGCTCTGAGATTCTAGGTCTGTTTTCTCTTTCGTCAGACAGAGGCTCAGGCCAGA-CAGTGTACATCAAAGTTCCCTTCACGTGTCAAATAACAGTGGTTCTGTGACTCTAGGTTCATCGATTCTAAATCATTTCAAATGTGTTCAGAGACAGATTTACAGCGCAGTCCACGAAGCTTGAATGTGA--------GCTCCCTCGGT----GGCCATCTCTTGCAGGGACTCAGGAG--------------GGAAGCTGGACATATGTCTGTCTT--------------CAC--AGTCTGGACAGCtctctgtctcatccca----tgtcctgtctgccgcccttccctggtgtctggtggcattgaaggga i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163907759 487 + 165299245 TTTGCTGCAGCACCTAACTTCGAACCTTGGCTT--AACCGTTGGAAGCACATGCAGTTCCTCA-ATAGATACTTAATGACTTCTAA---------AGTAGGTTGCCAGTAAGGGAGAAAAGCTTTCATCTATAAGGTGAAAAA-GGCCGACTGGGAGCTGGGGCTCCATCATCCCTCTGCTCTGAGATTCTAggtctgttttctcttttgtcagACAGAGGCTCAGGCCAGA-AAGTGTACATAAAAGTTCCCTTCACATGTCAAATAACAGTGGTTCTATGACTCTAGGTTCATTGATTCTAAATCATTTCAAATGTGTTCAGAGACGGATTTACAGCGCAGTCCACGAAGCTTGAATGTGA--------GCTCCCTCGGC----GGCCGTCTCTTGCAGGGACTCAGGAG--------------GGAAGCTGGACATATGTCTGTCTT--------------CGC--AGTCTGGACAGCTCTCCGTCCCATCCCA----TGTCCTCTCTGCCGCCCTTCCCTGGTGTCTGGTGGCATTGAAGGGA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96694345 482 + 98384682 TTTACTGCAGCACCTAACTTAGAAACTTGGCTT--AACCTTTGGAAGCACATGCAGTTCCTC-------TACTTAATGACTTCTAA---------AGTAGGTTGCCAATAAGGGAGAGAAGCTTTCATCTATAAGGTGAAAAAGGGCCGACTGGGAGCTGGGGCTCCATCATCCCCCTGCTCTGAGATTCTAGGTCTGTTTTCTCTTTTGTGAGACAGAGGCTCAGGCCAGA-CAGTGTACATAAAAGTTCCCTTCACATGTCAAATAACAGTGGTTCTATGACTCTAGGTTCATTGATTCTAAATCATTTCAAATGTGTTCAGAGACGGATTTACAGCGCAGTCCACGAAGCTTGAATGTGA--------GCTCCCTCGGC----GGCCATCTCTTGCAGGGACTCAGGAG--------------GGAAGCTGGACATATGTCTGTCTT--------------CCC--AGTCTGGACAGCtctccgtcccatccca----tgtcctctctgccgcccttccctggtgtctggtggcattgaaggga i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56184011 497 + 122678785 TTTGGCACAGGGTCTAACCTTAAAATTTGACTTGAAACTCTGATAATCACATGCACGTCATCAAGTAGATACCTACTGACttccagcacgtttccagcacgtt-ccagcaAGGA--AATACCTTTCATGCACGAGGTCAA----GGCCGAC-----------GCCCCACAATGCC-CGGCTCTGAGGTCGCTGGCCCATTTGCTCATTCAGCAAGTGGACACTTAGACCAGACCCGTGTACATCAG---TCCCCTCGGATCTGAAATGATCATGG-TCCACGACACTATGTTTGCTTCTCCGCAGTCACCTTGCACACATTTGGACACCAA-TAGCAGTGGGGCTGACG--GCTCAGCCGTGGCCCTAGCTGCTCCCACGGCCAGGGTCCATGCTGTGGAAATGCCCATCAGCCATGTGTGTTTGTGGGACCTGCAGAGTTGGCTACCGCAGGTGCAGGCGAAGCAGGTGGTGCAGGCTGCTGTCTGTCTGCCCTCGTTCCTGTCATCTCTGCCGCCTGTCCC------------------------ i canFam3.chr1 I 60 C 0 e calJac3.chr4 169902286 5 + 171630274 I e nomLeu3.chr3 156314779 5603 + 157873769 I a score=1951389.000000 s hg38.chr6_KB021644v2_alt 117854 874 + 185823 tcatgaggactttgagatccaatttgaaaagagatgaactgcagtaatttcactctggcatggtgggatccactcatggttcaccatcacgtctgtggatagttgaattactgctgatcttcccagtgtggaagtggcttccagaacattcacccaaccaccgtgtgtctcacccggcctgtgacaagaaggagcagggccagaggtcagttccgacgcagaagggtcctccagggcccagggggatggac-agccaggcagacacaaggctcaa--------aggcgccga-------ccccgaagctgctctgcaggaaattcttccaatctgtacaccc-taaattatatgcagg-ttcatccccaccttatccaaacaaaagtcctcgtctgtcaagcatctcctgtcgagaatgcagtacatgcagcgataaacacatcacacacaggaaa----aggcatgtggcacaaacacaatggcaattactt-----gtgcaaggtagaacttttcagaaccc--------cagcgtcggcagtg--ccgggcggggctggcagtcggaaaagcaag---ttctgcggcg-gaccacg--------------ggtttaggctcacc--gcgcagtcccaatacaactctatttcctgcgactctggaaactgagttttctttctgttctctctaaggaaaacaatattaaaatagagatagccattggcacatgaaaaggtggttgaataatatgcagaaaaatt-gggggaaatgtgtatgtggggccgttattcagtag----aaacattgtatcacgttcagatgggccttgttgga----gaagatttgctaggttttcagaacgcgtagtgttgttgaggtttctcttctcactgcaggcg--agggcttcctgctgt-----ccttcctgtttgtaattc s panTro4.chr6 170705413 874 + 172623881 tcatgaggactttgagatccaatttgaaaagagatgaactgcagtaatttcactctggcatggtgggatccactcatggttcaccatcacgtctgtggataattgaattactgctgatcttcccagtgtggaaatggcttccagaacattcacccaaccaccatgtgtctcacccggcctgtgacaagaaggagcagggccagaggtcagttccgacgcagaagggtcctccagggcccagggggatggat-agccaggcagacacaaggctcaa--------aggcgccga-------ccccgaagctgctctgcaggaaattctttcaatctgcacaccc-taaattatatgcagg-ttcatccccacctcatccaaacaaaagtcctcgtctgtcaagcatctcctgtcgagaatgcagtacatgcagcgataaacacatcacacacaggaaa----aggcatgtggcacaaacacaatggcaattactt-----gtgcaaagtagaacttttcagaaccc--------cagcgtcggcaatg--ccgggcggggctggcagtcggaaaaggaag---ttctgcggcg-gaccacg--------------ggtttaggctcacc--gcgcagtcccaatacaactctgtttcctgcgactctggaaactgagttttctttctgttctctctatggaaaacaatattaaaatagagatagccattggcacatgaaaaggtggtggaataatatgcagaaaaatt-gggggaaatgtgtatgtggggccgttattcagtag----aaacattgtatcacgttcagatgggccttgttgga----gaagatttgctaggttttcagaacgcgtagtgttgttgaggtttctcttctcactgcaggcg--agggcttcctgctgt-----ccttcctgttcgtaattc i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172459837 874 + 174210431 tcatgaggactttgagatccaatttgaaaagagatgaactgcagtaatttctctctggcatagtgggatccactcatggttcaccatcacgtctgtggatagctgaattactgctgatcttcccagtgtggaaatggcttccagaac-ttcacccaaccaccgtgtgtctcacccggcccgtgacaagaaggagcagggccagaggtcagttccgacgcagaagtgtcctccagggcccagggggatgggc-agccaggcagacacaaggctcaa--------aggcgccga-------ccccgaagctgctttgcaggaaattcttccaatctgcacaccc-taaattatatgcagg-ttcatcctcacctcatccaaacaaaagtcctcatctgtcaagcatctcctgtcgacaatgcagtacatgcagcgataaacacatcacacacaggaaa----aggcatatggcacaaacacaatggcaattactt-----gtgcaagatagaacttttcagaaccc--------cagagtcggcaatg--ccgggcggggctggcagtgggaaaagcaagtgcttctgctgcg-gaccacg--------------ggtttaggctcacc--gagcagtcccaatacaactctacttcctgcgtctctggaaactgagttttctttctgttctctctatggaaaacagtattaaaatagagatagccatcggcacatgaaaaggtggttgaataacatgcagaaaaatt-gggggaaatgtgtatgtggggccgttattcagtag----aaacgttgtatcacgttcagatgggccttgttgga----g-agatctgctaggttttcagaacgcgtagtg-tgttgaggtttctcttctcgctgcaggcg--agggcttcctgctgt-----ccttcctattcgtaattc i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168135751 876 + 169853907 tcatgaggactttgagatccaatttgaaaagagatgaactgcaataatttcactctggcatggtgggatccactcgtggttcaccgtcacttctgtggatagttgaattactgctgatcttcccagtgtggaaatggcttctagaacattcatgcaaccaccgtgcctctcacccggcctgtgacaccaaggagcagggccaaaggtcagttccaacgcagaagtgtcctccggggcccaggcggacgggc-agccaggcagacacaaggctcaa--------agtcttcga-------ccccgaagttactctgtgggaaattcttccaatctacacaccc-taaattatatgcagg-ttcatcctcacctcatccaaacaaaagtcctcatgtgtcaagcatctcctgtccagaatgcagtacatgcagcgataaacacatcacacacaggaaa----agacgtatggcacaaacacaacggcaattacat-----gtgcaagatagaacttttcagaaccc--------cagcatcggcgatg--cccagcgggactggaaattggaaaagcaactgcttctgtggcg-ggccatg--------------ggtttaggctcacc--gtgctgtcacgatacaactctatttcccgcatctctggaaactgagttttctttctgttctgtctatggaaaacaacattaaaatagagataaccattggcacatgaaaaggtgtttgaataatatgcagaaaaattggggggaaatgtgcatgtgaggccgttattcagtgg----aaacgctgtaacacgttcagatgggcctcgtgaga----gaagatttgctaggttttcag-atgcgtaatg-tgttgaggtttctcttctcactgcaggcg--agggcttcctgctgt-----ccttcctatttgtaattt i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169090013 876 - 170955103 tcatgaggactttgagatccaatttgaaaagagatgaactgcaataatttcactctggcatggtgggatccactcgtggttcaccatcacttctgtggatagttgaattactgctgatcttcccagtgtggaaatggcttctagaacattcatgcaaccaccgtgcctctcacccggcctgtgacaccaaggagcagggccagaggtcagttccaacgcagaagtgtcctctggggcccaggtggacgggc-agccaggcagacacaaggctcaa--------aggcttcga-------ccccgaagttactctgtgggaaattcttccaatctacacaccc-taaattatatgcagg-ttcatcctcacctcatccaaacaaaagtcctcatgtgtcaagcatctcctgtccagaatgcagtacatgcagcgataaacacatcacacaCAGGAAA----AGACGTATGGCACAAACACAACGGCAATTACAT-----GTGCAAGATAGAACTTTTCAGAACCC--------CAGCATCGGCGATG--CCCAGCGGGACTGGCAGCTGGAAAAGCAACTGCTTCTGTGGCG-GGCCATG--------------GGTTTAGGCTCACC--GTGCTGTCACGATACAACTCTATTTCCCGCGTCTCTGGaaactgagttttctttctgttctgtctatggaaaacaacattaaaatagagataaccattggcacatgaaaaggtgtttgaataatatgcagaaaagttggggggaaatgtgcatgtgaggccgttattcagtgg----aaacgctgtaacacgttcagatgggcctcgtgaga----gaagatttgctaggttttcag-atgcgtaatg-tgttgaggtttctcttctcactgcaggcg--agggcttcctgctgt-----ccttcctatttgtaattt i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163908246 874 + 165299245 TTATGAGGACTTTGAGATCCAATTTGAAAAGAGATGAACTGCAATAATTTCACTCTGGCATGGTGGGATCCACTCGTGGTTCACCATCACTTCTGTGGATAGTTGAATTACTGCTGATCTTCTCAGTGTGGAAATGGCTTCCAGAACATTCACCCAACCACCGTGCCTCTCACGCAGCCTGTGACACCAAGGAGCAGGGCCAGAGGTCAGTTCCGACGCAGAAGTGTCCTCCAGGGCCCAGGCGGACGGGC-AGTCAGGCAGACACAAGGCTCAA--------AGGCTTCGA-------CCCTGAAGTTGCTCTGTGGGAAATTCTTCCAATCTACACACCC-TAAATTATATGCAGG-TTCATCCTCACCTCATCCAAACAAAAGTCCTCATGTGTCAAGCATCTCCTGTCCAGAATGCAGTACATGCAGCGATAAACACATCACACACAGGAAA----AGACGTATGGCACAAACACAACGGCAATTACAC-----GTGCAAGATAGAACTTTTCAGAACCC--------CAGCATCGGCGATG--CCCAGTGGGACTGGCAGTTGGAAAAGCAACTGCTTCTGTGGCG-GGTCATG--------------GGTTTAGGCTCACC--GTGCTGTCACGATACAACTCTATTTCCCGCGTCTCTGGAAGctgagttttctttctgttctgtctatggaaaacaacattaaaatagagatagCCATTGGCACATGAAAAGGTGGTTGAATAATATGCAGAAAAATTGGGGGGAAATGTGTATGTGAGGCCATTATTCAGTGG----AAACGTTGTAACACGTTCAGATGGGCCTCGTTAG-------AGATTTGCTAGGTTTTCAGAATGCGTAATG-TGTtggggtttctcttctcactgcagGCG--AGGGCTTCCTGCTGT-----CCTTCCTATTTGTAATTT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96694827 876 + 98384682 tcatgaggactttgagatccaatttgaaaagagatgaactgcaataatttcactctggcatggtgggatccactcgtggttcaccgtcacttctgtggatagttgaattactgctgatcttcccagtgtggaaatggcttccagaacattcatgcagccaccgtggctctcacccagcctgtgacaccaaggagcagggccagaggtcagttccaatgcagaagtgtcctccggggcccaggcggacaggc-agccaggcagacacaaggctcaa--------aggcttcga-------ccccgaagttactctgtgggaaattcttccaatctacacaccc-taaattatatgcagg-ttcatcctcacctcatccaaacaaaagtcctcatctgtcaagcatctcctgtccagaatgcagtacatgcagcgataaacacatcacacaCGGGAAA----AGACGTATGGC-CAAACACAACGGCAATTACAC-----GTGCAAGATAGAACTTTTCAGATCCC--------CAGCATCGGCGATG--CCCAGTGGGACTGGCAGTTCGAAAAGCAACTGCTTCTGTGGCG-GGCCATG--------------GGTTTAGGCTCACC--GTGCTGTCACGATACAACTCTATTTCCTGTGTCTCTGGaaactgagttttctttctgttctgtctatggaaaacaacattaaaatagagatagccagtagcacatgaaaaggtgtttgactaatatgcagaaaaattggggggaaatgtatatgtgaggccgtttttcagtgg----aaacgttgtaacacgttcagatgggcctggtgaga----gaagatttgctaggttttcagaatgcgtaatg-tgttgaggtttctcttctcactgcaggcg--agggctccctgctgt-----ccttcctatttgtaattt i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169902291 833 + 171630274 TCACGAGGACtttgagatccag-ttgaaaagtgatgagtggcaagaatttcactctggcatggtgggatccacgcggggttcaccgtcccg----------gctgagttactgctgaccttcccagtgtgggaatggcttccagaacgttcacccaagcaccatgcctctcacttggcc--tgacaccaaagagcaaggctggaggtgagttccaacacagaagtgtcctccggggcccaaggaggtgggc-agctgagcagacacaaggctcaa-------gaggcgtcga-------cacggaggctgctctggggaa-----TCCCACTGCACACGCCA-GAAGTCACACGCAGG-TTGGTCCTTGCCTCGTC------------------TGTTGAGA--CGCCTGTCGAGAATGCAGCA-ACGCAGCGATAAACACCCCACACACACGGGAAGACAGACGTGTGGCACAAACACAATGGCGAGT-----------------TAGACTTCTTCAGAA-CC--------CGGCGTGGGCGATG--CCCAGT-GCACCAGCAGTCGGAAAAGCAGGTGCTTCTGTGGTG-GGCCACGGGAATCTTGACCGTGGGTTAGGCGCACCGGGAGCGCTAACAATACCCGCCTATTTTCCATATCCCTGGaaact--gttttgtttctgttctgtctatggaaaataacattaaaatagaggtagtcaccgg-acatggaaaggtggttgaataatatgcagaaaaatt-gggggaaacgtgtatgtgaggccattattcagtag----aaaCGCCGCGTGGCGCTCAGGTGGGCCTTGTGAGA------AGACCGGGCAGA-CTTCAGGATGCAGCACG-TGCCGAGGTTTCCCTCC------CGGGCAGCGCGGCCTCCTGCTGT------CTTCCCGTCAGTTCCTG i calJac3.chr4 I 5 C 0 s canFam3.chr1 56184508 859 + 122678785 ------------------CCCGTCTG-------------TGCTGT-Gtttagtttgggcaaagtgggatattcacatagtttgccattgcctctgtggacagttcaactactgcccatcttcccagcctggagacagcttctagaatatccaccta--cacattgccctccacctggcctgtgac-ccaaagtggagggc-agaggccagtcccaatacagaggtgtcctctggg--ccagg--gttgggcaagctgggcagttggagggggggatggagggtaggctttgagggagtggcctgaagccattctgtgggaaatgcttacatttctcatgcccataaattattagcaggtttcatccagacctggtcaaaacagaagtcctctcatgtccagaatattctgttaagaatgcaat---------gataaacacatgacatgtac--------atatataaaatgcatacatataaacatttatgctaataacgcaagatagaattcatcaaggcacacatcttgccttgtcagcaaggcacacatctggaatggtgttacggacagcaagtatttttggtgtgaagtcaca-------------tgttttacggccagc--aattaataacaataaaaatagatttcatgcatctatggaaattgatttttcattctgttctctttataggaaac---attaagttaggaatagtcattggtacatggaaaaatggtaaaagagtatgcagaaaa-tt-gggggaaattt--------ggcgtctattgggtagacaaaaatattatattatgctcgtgtgggttttattatgtttggagtacttgtcagagttttcaaatgcataatt-tgttgaggtttctttccacattgtgaata--aatgttcacttttataacgcattttctatttgtgcttc i canFam3.chr1 C 0 C 0 e nomLeu3.chr3 156314779 5603 + 157873769 I a score=329916.000000 s hg38.chr6_KB021644v2_alt 118728 121 + 185823 ggttttacttttctt-acagggcttccgaaatcattgaagtgtcaaaacctgaatccaccAGAATGTGTCCATGGAACTGAAAAC-TATCAGATAT----TTAGACAGGGTGCGTTAAAGGGCTCAC s panTro4.chr6 170706287 121 + 172623881 ggttttacttttctt-acagggcttccaaaatcattgaagtgtcaaaacctgaatccaccAGAATGTGTCCATGGAACTGAAAAT-TATCAGATAT----TTAGACAGGGTGTGTTAAAGGGCTCAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172460711 119 + 174210431 ggttttacttttcttaacagggcttccgaaatcattgaagtgtcaaaacctgaatccacccGAATGTGTCCATAGAACTGAAAAT-TATCAGATAT----TTAGGC---GTGTGTTAAAGGGCTCAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156320382 119 + 157873769 ggTTTTACTTTTCTT-ACACGGCTTCCGAAATCATTGAAGTGTCAAAACCTGAATCCACCTGAATGTGTCCATGGAACGGAAAAT-TATCAGATAT----TTAGAC--GGTGTGTTAAAGGGCTCAC i nomLeu3.chr3 I 5603 C 0 s rheMac3.chr4 168136627 121 + 169853907 ggttttacttttctt-agagggcttgcgaaatcattgaagtatcaaaacctgaatccacccGAATGTGTCCATGGACCTGAAAAT-TATCAGATAT----TTAGACAGGGTGTGTTAAAGGGCTCAC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169090889 121 - 170955103 ggttttacttttctt-agagggcttgcgaaatcattgaagtatcaaaacctgaatccacccGAATGTGTCCATGGACCTGAAAAT-TATCAGCTAT----TTAGACAGGGTGTGTTAAAGGGCTCAC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163909120 121 + 165299245 GGTTTTACTTTTCTT-AGAGGACTCGCGAAATCATTGAAGTATCAAAACCTGAATCCACCCGAATGTGTCCATGGACCTGAAAAT-TATCAGATAT----TTAGACAGGGTGTGTTAAAGAGCTCAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96695703 120 + 98384682 ggttttacttttcta-agagggcttgcgaaatcattgaagtatcaaaacctgaatccacccGAATGTGTCCATGGACCTGAAAAT-TATCAGATA-----TTAGACAGGGTGTGTTAAAGGGCTCAC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169903124 98 + 171630274 GGTTTGACTTTCCTT-AGAGGGTTTCCTAAATCACTGCAGGGTCAGAGCCCGAGTCCACCCGGATGTGTCACTGGAACTGAAACG-TGTCAGA---------------------------GGCTCAC i calJac3.chr4 C 0 I 14 s canFam3.chr1 56185367 120 + 122678785 cgtgttacttttgtt-aga-ggctccctgaatCTTCTCGGTGTGAAAACCTGCATCCACCTGAGTGTATCCGTCAACCTGAAAATGCCTCAGATGTGTCCATAGACACCGAG-GTTTATGTAC---- i canFam3.chr1 C 0 C 0 a score=105055.000000 s hg38.chr6_KB021644v2_alt 118849 40 + 185823 CGTGCGTCCGTTTTATGCCGTAATTATGTGCACAAATAAT s panTro4.chr6 170706408 40 + 172623881 CGTGCGTCCGTTTTATGCCGTAATTATGTGCACAAATAAT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172460830 40 + 174210431 CGTGCGTCCGTTTTATGCCGTAATTATGTGCACAAATAAT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156320501 40 + 157873769 CGTGCGTCCGTTTTATGCCGTATTTATGTGCGCAAATAAT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168136748 40 + 169853907 CGTGCGGCCTTTTTATGCCGTAATTATGTGCACAAATTAT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169091010 40 - 170955103 CGTGCGGCCGTTTTATGCCGTAATTATGTGCACAAATTAT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163909241 40 + 165299245 CGTGCGGCCGTTTTATGCCGTAATTATGTGCACAAATTAT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96695823 40 + 98384682 CGTGCGGCCGTTTTATGCCGTAATTATGTGCACAAATTAT i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56185487 40 + 122678785 TGCGTGTCTGTTTTATACCAGAATTTCGAGGGTCAGTAAT i canFam3.chr1 C 0 I 1004 e calJac3.chr4 169903222 14 + 171630274 I a score=42383.000000 s hg38.chr6_KB021644v2_alt 118889 28 + 185823 TGCATGGCCGGCGTCGCGTGAGACGCGG- s panTro4.chr6 170706448 28 + 172623881 TGCATGGCCGGCGTCGTGTGAGACGCAG- i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172460870 28 + 174210431 TGCATGGCCGGCTTCGTGTGAGACGCAG- i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156320541 28 + 157873769 TGCATGGCCGGCTTCGTGTGAGACGCAG- i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168136788 24 + 169853907 TGCATGGCCGGCTTCCT-----ACGCAGA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169091050 24 - 170955103 TGCATGGCCGGCTTCCT-----ACGCAGA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163909281 24 + 165299245 TGCATGGCCGGCTTCCT-----ACGCAGA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96695863 24 + 98384682 TGCATGGCCGGCTTCCT-----ACGCAGA i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169903222 14 + 171630274 I e canFam3.chr1 56185527 1004 + 122678785 I a score=356778.000000 s hg38.chr6_KB021644v2_alt 118917 131 + 185823 GAAGGACCGGGGAGCGGCAGAACCAGGGCTTCCAATTCCCGTCCGCGTTTAAAGCGCGCCAGCGCCCTCTGGTGCTCAGGCTGCGCAGCGCGCCGGCTCCGCGGGTGCCGCCAAGGGCCGGGGCTGCCTGG s panTro4.chr6 170706476 131 + 172623881 GAAGGACCGGGGAGGAGCAGAACCAGGGCTTCCAATTCCTGTCCGCGTTTGAAGCGCGCCAGCGCCCTCTGGTGCTCAGGCTGCGCAGCGCGCCGGCTCCGCGGGTGCCGCCAAGGGCCGGGCCTGCCTGG i panTro4.chr6 C 0 I 204 s ponAbe2.chr6 172460898 131 + 174210431 AAAGGACCCGGGAGGAGCAGAACCAGGGCTTCCAATTCCTGTCCGCGTTTAAAGCGCGCCAGCGCCCTCTGGTGCTCAGGCTGCGCAGCGCGCCGGCTCCGCGGGTGCCGCCAAGGGCCGGGCCAGCCTGG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156320569 131 + 157873769 AAAGGACCGGGGAGGAGCAGAACCAGGGCTTCCAATTCCTGTCCGCGTTTAAAGCGCGCCGGCGCCCTCTGGTGCTCAGGCTGCGCAGCGCGCCGGCTCCGCGGGTGCCGCCAAGGGCCGGGCCTGCCTGG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168136812 131 + 169853907 AAAGGACGTGGGAGGAGCAGAACCAGGGTTTCCAAGTCCTGTCCTCGTTTAAAGCGCGCCAGCGCCCTCTGGTGCTCAGGCTGCGCAGCGCGCCGCCTCCGCGGGTGCCGCCAAGGGCCGGGCCTGCCCAG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169091074 131 - 170955103 AAAGGACGTGGGAGGAGCAGAACCAGGGTTTCCAAGTCCTGTCCTCGTTTAAAGCGCGCCAGCGCCCTCTGGTGCTCAGGCTGCGCAGCGCGCCGGCTCCGCGGGTGCCGCCAAGGGCCGGGCCTGCCCAG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163909305 131 + 165299245 AAAGGACCCGGGAGGAGCAGAACCAGGGTTTCCAAGTCCTGTCCGCGTTTAAAGCGCGCCAGCGCCCTCTGGTGCTCAGGCTGCGCAGCGCGCCGGCTCCGCGGGTGCCGCCAAGGGCCGGGCCTGTCCAG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96695887 131 + 98384682 AAAGGACGTGGGAGGAGCAGAACCAGGGTTTCCAAGTCCTGTCCGCGTTTAAAGCGCGCCAGCGCCCTCTGGTGCTCAGGCTGCGCAGCGCGCCGGCTCCGCGGGCGCCGCCAAGGGCCGGGCCTGCCCAG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169903236 100 + 171630274 GAAGGAACGGGGAGGAGCAGGACGGCTGAGGCCGAGTCCTG-CCGCGTGGAAAGCACGCCGGTGCCCTCTGCTGCTCAGGCTGCGCAGCGC-------------------------GCCAGGCCTG----- i calJac3.chr4 I 14 C 0 e canFam3.chr1 56185527 1004 + 122678785 I a score=69270.000000 s hg38.chr6_KB021644v2_alt 119048 27 + 185823 GGGCCTGCCCGGGGTTCCAGACCTGCT s panTro4.chr6 170706811 27 + 172623881 GGGCCTGCCCGGGGTTCCAGACCTGCT i panTro4.chr6 I 204 C 0 s ponAbe2.chr6 172461029 27 + 174210431 GGGCCTGCCCGGGGTTCCAGACCTGCT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156320700 27 + 157873769 GGGCCTGCCCGGGGTTCCAGACCTGCT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168136943 27 + 169853907 GGGCCTGCCCGGAGTTCCAGACCTGCA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169091205 27 - 170955103 GGGCCTGCCCGGAGTTCCAGACCTGCA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163909436 27 + 165299245 GGGCCTGCCCAGAGTTCCAGACCTGCA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96696018 27 + 98384682 GGGCCTGCCCGGAGTTCCAGACCTCCA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169903336 19 + 171630274 --------CCGGGGTTCTAACCCAGAC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56185527 1004 + 122678785 I a score=90787.000000 s hg38.chr6_KB021644v2_alt 119075 38 + 185823 GGACCGTGCATGGCTCATCAGGCCGGGCCTGTCCAGGG s panTro4.chr6 170706838 38 + 172623881 GGACCGTGCATGGCTCATCAGGCCGGGCCTGTCCAGGG i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156320727 38 + 157873769 GGACCGTGCAAGGCTCATCAGGCCAGGCCTGTCCAGGG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168136970 38 + 169853907 GGACTGTGCACGGCTCATCAGGCCGGGCCTGTCCAGGG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169091232 38 - 170955103 GGACCGTGCACGGCTCATCAGGCAGGGCCTGTCCAGGG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163909463 38 + 165299245 GGACCGTGCACGGCTCATCAGGCAGGGCCTGTCCAGGG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96696045 38 + 98384682 AGACTGTGCACGGCTCATCAGGCCGGGCCTGCCCAGGG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169903355 38 + 171630274 GGACCCTGCAGGGCTCATCGGGCCGGGCCTGTCCAGGG i calJac3.chr4 C 0 T 67 e canFam3.chr1 56185527 1004 + 122678785 I e ponAbe2.chr6 172461056 0 + 174210431 C a score=-3609.000000 s hg38.chr6_KB021644v2_alt 119113 5 + 185823 GTTT-G s panTro4.chr6 170706876 5 + 172623881 GTTT-G i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156320765 5 + 157873769 GTTC-C i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168137008 4 + 169853907 GTCC-- i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169091270 4 - 170955103 GTCC-- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163909501 4 + 165299245 GTCC-- i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96696083 5 + 98384682 GCCTG- i chlSab2.chr13 C 0 I 10 e calJac3.chr4 169903393 67 + 171630274 T e canFam3.chr1 56185527 1004 + 122678785 I e ponAbe2.chr6 172461056 0 + 174210431 C a score=5714.000000 s hg38.chr6_KB021644v2_alt 119118 7 + 185823 AGAACCG s panTro4.chr6 170706881 7 + 172623881 AGAACCG i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156320770 7 + 157873769 AGAACCG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168137012 7 + 169853907 AGGCCCT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169091274 7 - 170955103 AGACCCT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163909505 7 + 165299245 AGACCCT i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169903393 67 + 171630274 T e canFam3.chr1 56185527 1004 + 122678785 I e chlSab2.chr13 96696088 10 + 98384682 I e ponAbe2.chr6 172461056 0 + 174210431 C a score=54310.000000 s hg38.chr6_KB021644v2_alt 119125 31 + 185823 CAGACCTGCAGGACTGTGCATGGCTCATTAG s panTro4.chr6 170706888 31 + 172623881 CAGACCTGCAGGACTGTGCATGGCTCATTAG i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156320777 31 + 157873769 CAGACCGGCAGGACTATGCATGGCTCATTAG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168137019 31 + 169853907 CAGACCTGCAGGACCGTGCATGGCTCATCAG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169091281 31 - 170955103 CAGACCTGCAGGACTGTGCACGGCTCATCAG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163909512 31 + 165299245 CAGACCTGCAGGACCGTGCTCGGCTCATCAG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96696098 31 + 98384682 CAGACCTGCAAGACTGTGCACGGCTCATCAG i chlSab2.chr13 I 10 C 0 e calJac3.chr4 169903393 67 + 171630274 T e canFam3.chr1 56185527 1004 + 122678785 I e ponAbe2.chr6 172461056 0 + 174210431 C a score=43187.000000 s hg38.chr6_KB021644v2_alt 119156 21 + 185823 GCCGGGTCTGTCCAGGGGGTC s panTro4.chr6 170706919 21 + 172623881 GCCGGGTCTGTCCAGGGGGTC i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156320808 21 + 157873769 GCCGGGCCTGTCCAGGGGGTC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168137050 21 + 169853907 GCCGGGCCTGTCCAGGGGTCC i rheMac3.chr4 C 0 I 7 s macFas5.chr4 169091312 21 - 170955103 GCCGGGCCTGTCCAGGGGTCC i macFas5.chr4 C 0 I 7 s papAnu2.chr4 163909543 21 + 165299245 GCAGGGCCTGTCCAGGGGTCC i papAnu2.chr4 C 0 I 538 s chlSab2.chr13 96696129 21 + 98384682 GCCGGGCCTGTCCAGGGGTCC i chlSab2.chr13 C 0 I 7 s calJac3.chr4 169903326 19 + 171630274 GCCAGGCCTGCC--GGGGTTC i calJac3.chr4 T 67 C 0 e canFam3.chr1 56185527 1004 + 122678785 I e ponAbe2.chr6 172461056 0 + 174210431 C a score=17986.000000 s hg38.chr6_KB021644v2_alt 119177 10 + 185823 -----CAGACCTGCA s panTro4.chr6 170706940 10 + 172623881 -----CAGACCTGCA i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156320829 10 + 157873769 -----CAGACCTGCA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168137078 10 + 169853907 -----CAGACCTGCA i rheMac3.chr4 I 7 C 0 s macFas5.chr4 169091340 10 - 170955103 -----CAGACCTGCA i macFas5.chr4 I 7 C 0 s papAnu2.chr4 163910102 10 + 165299245 -----CAGACCTGCA i papAnu2.chr4 I 538 C 0 s chlSab2.chr13 96696157 10 + 98384682 -----CAGACCCGCA i chlSab2.chr13 I 7 C 0 s calJac3.chr4 169903345 10 + 171630274 TAACCCAGAC----- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56185527 1004 + 122678785 I e ponAbe2.chr6 172461056 0 + 174210431 C a score=103963.000000 s hg38.chr6_KB021644v2_alt 119187 35 + 185823 GGACCGTGCATGGCTCATCAGGCCGGGCCTGTCCA s panTro4.chr6 170706950 35 + 172623881 GGACCGTGCATGGCTCATCAGGCCGGGCCTGTCCA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172461056 34 + 174210431 GGACCGTGCAT-GCTCATCAGGCCGGGCCTGTCCA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156320839 35 + 157873769 GGACCGAGCATGGCTCATCAGGCCGGGCCTGTCCA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168137088 35 + 169853907 GGACCGTGCATGGCTCATCAGGCCGGGCCTGTCCA i rheMac3.chr4 C 0 I 109 s macFas5.chr4 169091350 35 - 170955103 GGACCGTGCATGGCTCATCAGGCCGGGCCTGTCTA i macFas5.chr4 C 0 I 227 s papAnu2.chr4 163910112 34 + 165299245 GGACCGTGCACGGCTCATCAGGCCGGGCCTGCCC- i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96696167 35 + 98384682 GGACCGTGCATGGCTCATCAGGCCGGGCCTATCCA i chlSab2.chr13 C 0 I 59 s calJac3.chr4 169903355 35 + 171630274 GGACCCTGCAGGGCTCATCGGGCCGGGCCTGTCCA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56185527 1004 + 122678785 I a score=10800.000000 s hg38.chr6_KB021644v2_alt 119222 3 + 185823 GGG s panTro4.chr6 170706985 3 + 172623881 GGG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172461090 3 + 174210431 GGG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156320874 3 + 157873769 GGG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168137232 3 + 169853907 GGG i rheMac3.chr4 I 109 C 0 s macFas5.chr4 169091612 3 - 170955103 GGG i macFas5.chr4 I 227 C 0 s papAnu2.chr4 163910146 3 + 165299245 GGG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96696261 3 + 98384682 GGG i chlSab2.chr13 I 59 C 0 s calJac3.chr4 169903390 3 + 171630274 GGG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56185527 1004 + 122678785 I a score=2800.000000 s hg38.chr6_KB021644v2_alt 119225 1 + 185823 G s panTro4.chr6 170706988 1 + 172623881 G i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172461093 1 + 174210431 G i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156320877 1 + 157873769 G i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168137235 1 + 169853907 G i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169091615 1 - 170955103 G i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163910149 1 + 165299245 G i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96696264 1 + 98384682 G i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169903393 0 + 171630274 C e canFam3.chr1 56185527 1004 + 122678785 I a score=1240745.000000 s hg38.chr6_KB021644v2_alt 119226 519 + 185823 TTCCAGA-----------------------------------------CCCGCGGGGACCTTGGCTCCATCAGGCGGGAACCGCCCCGCGGGATTCTGAAAGGATGAATGCA-TTTTCCTCTTTCTAGCATGGAAGGATTGTTAA--------------------TTATTTCTTCGTAGTTTTCTGTGCTTCCCTTTCTCCTTTTTGCCTCACCTGCTCTTTCCTCCTGAATCCTGAGTGATTTGGGTAAAGCCAATGGTCGGATTACCTGGGAAGAAGCTGGGAAGCCAAATGTATGAAGAGC-GGGGCTTCAGATAGGGGCCACGGAGAGCCCAGGCCCAGGAGGCCTGCAGAGCCTGGGAGGAGGGAGGCTCACCCAGCCCGGG-------------------------------------------------------GCCTGGCCCCATGGGGGTCCTGCTGCAGA-----------------------------------------------------------------GGAGGAGGGAGGCTCACCCAGCGCTGGGCCTGGCCCC-TGGTGGTCCTCCTGCAGATGTAGCCGTGAGGGCTGCTGACCCC-----CTCCAACTTCACCGCCTCTCCTGAATCCCAGGCCATCCC--AGCCTCGTCTGGCGGTGTGAAGAGTGGATCTGAATTCCAAAGATCTG s panTro4.chr6 170706989 520 + 172623881 TTCCAGA-----------------------------------------CCCGCGGGGACCTTGGCTCCATCAGGCGGGAACCGCCCCGCGGGATTCTGAAAGGATGAATGCA-TTTTCCTCTTTCTAGCATGGAAGGATTGTTAA--------------------TTATTTCTTCGTAGTTTTCTGTGCTTCCCTTTCTCCTTTTTGCCTCACCTGCTCTTTCCTCCTGAATCCTGAGTGATTTGGGTAAAGCCAATGGTCGGATTACCTGGGAAGAAGCTGGGAAGCCAAATGTATGAAGAGC-GGGGCTTCAGATAGGGGCCACGGAGAGCCCAGGCCCAGGAGGCCTGCAGAGCCTGGGAGGAGGGAGGCTCACCCAGCCCGGG-------------------------------------------------------GCCTGGCCCCATGGGGGTCCTCCTGCAGA-----------------------------------------------------------------GGAGGAGGGAGGCTCACCCAGCGCTGGGCCTGGCCCCATGGGGGTCCTCCTGCAGATGTAGCCGTGAGGGCTGCTGACCCC-----CTCCAACTTCACCGCCTCTCCTGAATCCCAGGCCATCCC--AGCCTCGTCTGGCGGTGTGAAGAGTGGATCTGAATTCCAAAGATCTG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172461094 582 + 174210431 TTCCAGA-----------------------------------------CCCGCGGGGACCTTGGCTCCGTCAGGCGGGAACCGCCCCGCGGGATTCTGAAAGGATGAATGCA-TTTTCCTCTTTCTAGCATGGAAGGATTGTTAA--------------------TTATTTCTTCGT-GTTTTCTGTGCTTCCCTTTCTCCTTTTTGCCTCACCTGCTCTTTCCTCCTGAATCCTGAGCGATTTGGGTAAAGCCAGTGGTCGGATTACCTGGGAAGAAGCTGGGAAGCCAAATGTATGAAGAGCGGGGGATTCGGATAGGGGCCACGGAGAGCCCAGGCCCAGGAGGCCTGCAGAGCCTGGGAGGAGGGAGGCTCACCCAGCCCTGG-------------------------------------------------------GCCTGGCCCC-TGGGGGTCCTCCTGCAGAGCCTGGGAGGAGGGAGGCTCACCCAGCGCTGGGCCTGGCCCCTGGGGGTCCTCCTGCAGAGCCTGGGAGGAGGGAGGCTCACCCAGCGCTGGGCCTGGCCCC-TGGGAGTCCTCCTGCAGATGTAGCCATGAGGGCTGCTGATCCC-----CTCCAACTTCA-CGTCTCTCCTGAATCCCAGGCCATCCc--agccttgtctggcggtgtgaagaatggatctgaattccaaagatctg i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156320878 464 + 157873769 GTCCAGA-----------------------------------------CCCGCGGGGACCCTGGCTCCATCAGGCGGGAACCGCCCCGCGGTATTCTGAAAGGATGAATGCA-TTTTCCTCTTTCTAGCATGGAAGGATTGTTAA--------------------TTATTTCTTCGTAGTTTTCTGTGCTTCCCTTTCTCCTTTTTGCCTCACCTGCTCTTTCCTCCTGAATCCTGAGTGATTTGGGTAAAGCCAATGGTCAGATTACCTGGGAGGAAGCTGAGAAGCCAAATGTATGAAGAGC-GGGGGTTCGGATAGGGGCCACGGAGAGCCCAGGCTCAGGAGCCCTACAGAGCCTGGGAGGAGGGAGGCTCACCCAGCCCTGG-------------------------------------------------------GCCTGGCCCC--------------------------------------------------------------------------------------------------------------------------TGGGGGTCCTCCTGCAGATGTAGCCGTGAGGGCTGCTGA-CCC-----CTCCAACTTCACCGAATCTCCTGAATCCCAGGCCATCCCATAGCCTCGTCCGGCCGTGTGAAGCGTGGATCTGAATTCCAAAGATCTG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168137236 542 + 169853907 TTCCAGA-----------------------------------------CCCACGGGGACCTTGACTCTATTAGGTGGGAACCGCCCCGCGGGGCTGGAAAAGGAAGAGTGCG-TTTTTCTCTTTCTAGCATGGAAGGATTGTTAAATGGACGGATTGTTAATTATTTATTTCCTCATAGTTTTCTGTGCTTCCGTTTCTCCTTTTTGCCTCACCTGCTCTTTCCTCCTGAATCCTGA-TGATTTGGGTAAAACCAATGGTGAGGTTACCTGGGAAGAAGCTGGGAAGCCGAATGTATGAAGAGC-GGGGGTTCGGGTGGGGGCCATGGAGAGCCCAGGCCCGGGAGGCCTGCAGAGCCTGGGAGGAGGGAGGCTCACCCAGTGCAGA-------------------------------------------------------GCCTGGCCCC-TGGGGGTCCTCCTGCAGA-----------------------------------------------------------------GGAGGAGGGAGGCTCACCCAGTGCTGGACCTGGTGCC-TGGGGGTCCTCCTGCAGATGTAGCCATGAGGGCTGCTGGCCCCTCCACCCCCAACTTCACTGTCACTCCTGAATCCCAGGCCATCCC--AGCCTCGTCTGGCCGTGTGAACAGTAGATCTGAATTCCAAAGATCTG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169091616 597 - 170955103 TTCCAGA-----------------------------------------CCCACGGGGACCTTGACTCTATCAGGTGGGAACCGCCCCGCGGGGCTGGAAAAGGAAGAGTGCG-TTTTTCTCTTTCTAGCATGGAAGGATTGTTAAATGGACGGATTGTTAATTATTTATTTCCTCACAGTTTTCTGTGCTTCCGTTTCTCCTTTTTGCCTCACCTGCTCTTTCCTCCTGAATCCTGA-TGATTTGGGTAAAACCAATGGTGAGGTTACCTGGGAAGAAGCTGGGAAGCCGAATGTATGAAGAGC-GGGGGTTCGGGTGGGGGCCATGGAGAGCCCAGGCCCGGGAGGCCTGCAGAGCCTGGGAGGAGGGAGGCTCACCCAGTGCAGAGCCTGGCCCCTGGGGGTCCTCTTACAGAGGAGGAGGGAGGCTCACCCAGTGCAGGGCCTGGCCCC-TGGGGGTCCTCTTACAGA-----------------------------------------------------------------GGAGGAGGGAGGCTCACCCAGTGCAGGGCCTGGCCCC-TGGGGGTCCTCCTGCAGATGTAGCCATGAGGGCTGCTGGCCCCTCCACCCCCAACTTCACTGTCACTCCTGAATCCCAGGCCATCCC--AGCCTCGTCTGGCCGTGTGAACAGTAGATCTGAATTCCAAAGATCTG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163910150 564 + 165299245 TTCCAGA-----------------------------------------CCCACGGGGACCTTGACTCCATCAGGCGGGAACCGCCCCGCGGGGTTGGGAAAGGAAGAATGCG-TTTTTCTCTTTCTAGCATGGAAGGATTGTTAAATGGATGgattgttaattatttatttcttcgtAGTTTTCTGTGCTTCcgtttttcctttttgcctcacCTGCTCTTTCCTCCTGAATCCTGA-TGATTTGGGTAAAACCAATGGTGAGGTTACCTGGGAAGAAGCTGGGAAGCCGAATGTATGAAGAGC-GGGGGTTCGGGTGGGGGCCATGGAAAGCCCAGGACCAGGAGGCCTGCAGAGCCT-------AGGAGGCTCACCAA--GCAgagcctg-----------------------ggaggagggaggctcACCCAGTGCAGGGCCTGGCCCC-TCGGGGTCCTCCtacaga-----------------------------------------------------------------ggaggagggaggctcaCCCAGTGCTAGACCCGGCCCC-TGGGGATCCTCCTGCAGATGTAGCCATGAGGGCTGctgacccc-ccacccccaacttcaCTGTCTGTCCTGAATCCCAGGCCATCCC--AGCCTCGTCTGGCCCTGTGAACAGTAGATCTGAATTCCAAAGATCTG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96696265 583 + 98384682 TTCCAGACCTGCCAGACTGTGCATGGCTCATCAAGCGGCGCCTGCACGCCCGCGGGGACCTTAACTCCATCAGGCGGGAACCGCCCTGCGGGGTTGGGAAAGGAACAATGCG-TTTTTCTCTTTCTAGCATGGAAGGATTGTTAAATGGATGGATAGTTAATTATTTATTTCTTCGTAGTTTTCTGTGCTTCTGTTTCTCCTTTTTGCCTCACCTGCTCTTTCCTCCTGAATCCTGA-TGATTTGGGTAAAACCAAGGGTGAGGTTACCTGGGAAAAAGCTGGGAAGCCGAATGTATGAAGAGC-GGGGGTTCGGGCGGGGGCCATGGAGAGCCCAGGCCCGGAAGGCCTGCAGAGCCTGGGAGGAGAGAGGCTCACCCAGTGCAGG-------------------------------------------------------GCCTGGCCCC-TGGGGGTCCTCCTACAGA-----------------------------------------------------------------GGAGGAGGGAGGTTCACCCAGTGCTGGACCCGGTGCC-TGGGGGTCCTCCTGCAGATGTAGCCATGAGGGCTGCTGGCCCCTCCACCCCCAACTTCACTGTCACTCCTGAATCCCAGGTCATCCC--AGCCTCATCTCGTCATGTGAACAGCAGATCTGAATTCCAAAGATCTG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169903393 450 + 171630274 TTCCAGA-----------------------------------------CCCGCGGGGCCCGTGGCTCCGTCTGGTGGGGTCTGCCCTGGGGAATTCTGAATGGACGACTGCATTTTTTCTCTTTCTGACAT-GAAGGATTGTTAA--------------------TCATTTCTTGGTAGTTTTCTGTGCTTTTCTCTCTCCTTTTCCCCACACCTGCTCTTTCCTCCTGAATCCTGAGTGATTTGGGTAAAGCCAGTGGGCGGATTACCTGGGAAGAAGCTGTGAACACAAA-----------C-----ATTCGGGTGGGAGCCGCAGAGAGCCCAGG-CCAGGAGGCCTGCAGAGCCTGTGGGGAGGGAGGCTTGCCCTGCACTGG-------------------------------------------------------CCCTGGCTCC-TGAGGGCCCC-------A-----------------------------------------------------------------GGGTGGGG------------------------------GGGGTGTCCTCCTGCAGATGTGGCTCTGAGGGCT-CTGACTCC-----CTC--ACTTCA--GTCTCCCCTGAATCCCAGGCCAGTCT--GACCTCGCCTGGCC----------TCGATCCGAATCCCAGGTATGT- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56185527 1004 + 122678785 I a score=4961429.000000 s hg38.chr6_KB021644v2_alt 119745 1623 + 185823 GGTCTTGCTCTGACTTTCCCCATTTGCTGCAGTTTGAGGAAGTAACGAATTATTTTGGAATCTTCATGTGTGTACATTTTAATTTTTAAAATAAGGGTAAAAAAATTCCACCATTGCAGGTGAC--TGAAAGTGAGGAGGGAGAGCTTGTGTGGA----AGGACATGAAAAATTGCTCTCGGAGCCAACAACTGCTGCTCCCTTCTCCCTGCACCCTCTAGACAGGCGCTGTTCCTG---ACCCTGTGAAGAGGCAGCGTCATGCGGGGCGATGGGA-------ACACA----GAGACTGCAGCATGGA------CAGACGTTTGTGTTGCAAGCAGACACACACCTCCAGGGTAAATGTTTATTCCAGAGGCACCACCATTCCCACGCCCAGCGAGTGTGCATTCTTTCTGGATTCAGAGCCCCACAGTTGTGTTTGTGAGTCATCAATGGTGAACGGTGGGGCCTTCTGGGGACAGGGGTGTGATCCATGTCTCCGTTTTCAGGTGACAACACCAGTCCCCCACCCACCTCACCCCAAACAAAGAGGCCACTGATCCGGGCCGCACAGACACC-GCAGCCAGCAGCCATGCGGCCCCGCCTTTTCA-TTTATTAAGCAGAGATTAATAATGGTATATTTACGGCCTGTCTGC-GGCCGAGCGACACTGCGGCATTGATTCATTTCTGACCCTAGTATTGCGGGAACAACGACGCCGTTGAGT-TCGCTGCTAGATTTATCACTTGAGGAGGTG-GGAGGAGAAGGGGGTTACTGCAAATAGAAAACGCACCTCTGGAAGCCCTTATTTATGAGCTGCTCAGGAACCGACCCCAAGACATAGCCACGCAGTTTCCAGTAACTGGGCGCTGTCACTG-GCGGGGCCTCCCCAGGTGGTGGCCGTCGGAGGCTGTGGCCGGGA-GGTGGCCCCGGTGCCGGCCGGGCCACACGGACAGCGTCTGGGGCAGCCGCGCCCCTCCGTCCCCAGGCCGCAGGCTGGCCACCCTGGCCGGGCGCGCACAAGATTTACACACCATCGGCGCCCACAGAGTCGACGGG-CCAGCTCAGCTTTTTCATTAGCGTCCCCACATGGCACAGCAGAGAGTTCCTACGTCACCTCCAGAATGTATTATGCAAGGGCTATTTCTGTATTTCTGTATCTACTGAGAGGTTATGTCAGGCAGCCCATCAACGGAAAAATGTGAAAGCAGGTTGTGACAGAACGAATATTCA---------GCCCAGCCCAGCACTGGACACAGATTAGGAGTTCATAAAATATTAATATTTGTGGGCCGATGGATTTTTGTCAGCTTCTGTGGTTTAtttctcttcttttttctctttcttttttccttttcCTCTTA--AAAAAAA--GAAGTTTAAAATGCATGACATACTATCAGTTGTTAATGAGAAAGTAAAAAGTGTAAGAAGTATTCTAAAAATAAC----AGATGTTCTTTCTGTATTCCTATTTG--TGA-TT--TTTTTTTCTTTATTAAAAAGAACCTTTGTGTTTGCACCCT-GGCGGGTTTCACTGCT--CTGAAAAAGGGACT----------GATGTAATTTAAAGTTAGTTAATATTTAAAAAGCGGTTCCTGCCCACACTCAGCATTTGTGGAGTCAAACGGAGGTTGTGCCGGTCCGTCGCTGAGACTTATCTCAGGAAG s panTro4.chr6 170707509 1625 + 172623881 GGTCTTGCTCTGACTTTCCCCATTTGCTGCAGTTTGAGGAAGTAACGAATTATTTTGGCATCTTCATGTGTGTACATTTTAATTTTTAAAATAAGGGTAAAAAAATTCCACCATTGCAGGTGAC--TGAAAGTGAGGAGGGAGAGCTTGTGTGGA----AGGACGTGAAAAATTGCTCTCGGAGCCAACAACTGCTGCTCCCTTCTCCCTGCACCCTCTAGACAGGCGCTGTTCCTG---ACCCTGTGAAGAGGCAGCGTCATGCGGGGCGATGGGA--------CACA----GAGACTGCAGCATGGA------CAGACGTTTGTGTTGCAAGCAGACACACACCTCCAGGGTAAATGTTTATTCCAGAGGCACCACCGTTCCCACGCCCAGCGAGTGTGCATTCTTTCTGGATTCAGAGCCCCACAGTTGTGTTTGTGAGTCATCAATGGTGAACGCTGGGGCCTTCTGGGGACAGGGGTGTGATCCATGTCTCCGTTTTCAGGTGACAACACCAGTCCCCCACCCACCTCACCCCAAACAAAGAGGCCACTGATCCGGGCCGCACAGACACC-GCAGCCAGCAGCCATGCGGCCCCGCCTTTTCA-TTTATTAAGCAGAGATTAATAATGGTATATTTACGGCCTGTCTGC-GGCCGAGCGACACTGCGGCATTGATTCATTTCTGACCATAGTATTGCGGGAACAACGACGCCGTTGAGT-TCGCTGCTAGATTTATCACTTGAGGAGGTG-GGAGGAGAAGGGGGTTACTGCAAATAGAAAACGCACCTCTGGAAGCCCTTATTTATGAGCTGCTCAGGAACCGACCCCAAGACATAGCCACGCAGTTTCCAGTAACTGGGCGCTGTAACTG-GCGGGGCCTCCCCAGGTGGTGGCCGTCGGAGGCTGTGGCCGGGA-GGTGGCCCCGGTGCTGGCCGGGCCACACGGACAGCGTCTGGGGCAGCCGCGCCCCTCCGTCCCCAGGCCGCAGGCTGGCCACCCTGGCCGGGCGCGCACAAGATTTACACACCATCGGCGCCCACAGAGTCGACGGG-CCAGCTCAGCTTTTTCATTAGCGTCCCCACATGGCACAGCAGAGGGTTCCTACGTCACCTCCAGAATGTATTATGCAAGGGCTATTTCTGTATTTCTGTATCTACTGAGAGGTTATGTCAGGCAGCCCATCAACGGAAAAATGTGAAAGCAGGTTGTGACAGAACGAATATTCA---------GCCTAGCCCAGCACTGGACACAGATTAGGAGTTCATAAAATATTAATATTTGTGGGCCGATGGATTTTTGTCAGTTTCTGTGGTTTAtttctcttcttttttctctttcttttttcctttTCCTCTTA--AAAAAAAAAGAAGTTTAAAATGCATGACATACTATCAGTTGTTAATGAGAAAGTAAAAAGTGTAAGAAGTATTCTAAAAATAAC----AGATGTTCTTTCTGTATTCCTATCTG--TGA-TT-ATTTTTTTCTTTATTAAAAAGAACCTTTGTGTTTGCACCCT-GGCGGGTTTCACTGCA--CTGAAAAAGGGACT----------GATGTAATTTAAAGTTAGTTAATATTTAAAAAGCGGTTCCTGCCCACACTCAGCATTTGTGGAGTCAAACGGAGGTTGTGCCGGTCCGTCGCTGAGACTTATCTCAGGAAG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172461676 1617 + 174210431 ggtcttgctctgactttccccatttgctgcagtttgaggaagtaattaattattttggaatcttcatgtgtgtacattttaatttttaaaataaggataaaaaaattccaccgttgcaggtgactgtgAAAGTGAGGAGGGAAAGCTTGTGTGGA----AAGACATGAAAAATTGCTCTCGGAGCCAACAACTGCTGCTCCCTTCTCCCTGCACCCTCTAGACAGGCGCTGTTCCTG---ACCCTGTGAAGAGGCAGCGTCATGCGGGGCGATGGGA-------ACACA----GAGACTGCAGCATGGA------CAGACGTTTGTGTTGCAGGCAGACACACACCTCCAGGGTAAATGTTTATTCCAGAGGCACCACCGTTCCCACGCCCAGCGAGTGTGCATTCTTTCTGGATTCAGAGCCCCACAGTTGTGTTTGTGAGTCATCAATGGTGAACGCTGGGGCCTTCTGGGGACAGGGGTGTGATCCATGTCTCCGTTTTCAGGTGACAACACCAGTCCCCCACCCACCTCACCCCAAACAAAGAGGCCACTGATCCTGGCCGCACAGACACCGGCAGCCAGCAGCTATGCGGCCCCGCCTTTTCA-TTTATTAAGCAGAGATTAATAATGGTATATTTACGGCCTGTCTGC-GGCCAAGCGACACTGCGGCATTGATTCATTTCTGACCATAGTATTGCGGGAACAACGACGCCGTTGAGT-TCGTTGCTAGATTTATCACTTGAGGAGGTG-GGAGGAGAAGGGGGTTACTGCAAATAGAAAACGCACCTCTGGAAACCGTTATTTATGGGCTGCTCAGGAACTGACCCCAAGACATAGCCACGCAGTTTCCAGTAACTGGGCGCTGTAACTG-GTGAGGACTCCCCAGGTGGTGGCCGTCGGAGGCTGTGGCCAGGA-GGTGGCCCCGGTGCTGGCCGGGCCACACGGACAGCGTCTGGGGCAGCCGCGCCCCTCCGTCCCCAGGCCGCAGGCTGGCCACCCTGGCCGGGCGTGCACAAGATTTACACACCATCGGCGCCCGCAGAGTCGACGGG-CCAGCTCAGCTTTTTCATTAGCGTCCCCACATGGCACAGCAGAGGGTTCCTACGTCACCTTCAGAATGTATTATGCAAGGGCTATTTCTGTATTTCTGTATCTACTGAGAGGTTATGTCAGGCAGCCCATCAACGGAAAAATGTGAAAGCAGGTTGTGACAGAACGAATATTCA---------GCCCAGCCCAGCATTGGACACAGATTAGGAGTTCATAAAATATTAATATTTGTGGGCCGATGGATTTTGGTCAGCTTCTGTGGTTTA------------TTTCTCTTTCTTTTTTCCTTTTCCTCTTA--AAAAAAA-AGAAGTTTAAAATGCATGACATACTACCAGTTGTTAATGAGAAAGTAAAAAGTATAAGAAGTATTCTAAAAATAAC----AGATGTTCTTTCTGTATTCCTATTTG--TGA-TTTTTTTTTTCCTTTATTAAAAAGAACCTTTGTGTTTGCACCCT-GGCGGGTTTCACTGCA--CTGAAAAGGGGACT----------GATGTAATTTAAAGTTAGTTAATATTTAAAAAGCGGTTCCTGCCCACACTCAGCATTTGTGGAGTCAAACAGGGGTTGTGCCGGTCCGTCGCTGAGACTTACCTCAGGAAG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156321342 1622 + 157873769 GGTCTTGCTCTGACTTTCCCCATTTGCTGCAGTTTGAGGAAGTAATGAATTATTTTGGAATCTTCGTGTGTGTACATTTTAATTTTAAAAATAAGGGTATAAAAATTCCACCATTGCAGGTGACTGTGAAAGCGAGGAGGGAGAGCTTGTGTGGA----AGGACATGAAAAATTGCTCTCAGAGCCAACAACTGTT-CTTCCTTCTCCCTGCACCCTCTAGACAGGCGCTGTTCCTC---ACCCTGTGAAGAGGCAGCGTCATGCGGGGTAATGGGA-------ACATA----GAGACTGCAGCATGGA------CAGACGTTTGTGCTGCAAGCAGACACACACCTCCAGGGTAAATGTTTATTCCAGAGGCACCACCATTCCCACGCCCAGTGAGTGTGCATTCTTTCTGGATTCAGAGCCCCACAGTTGTGTTTGTGAGTCATCAATGGTGAACGCTGGGGCCTTCTGGGGACAGGGGTGTGATCCATGTTTCCGTTTTCGGGTGACAACACCAGTCCCTCACCCACCTCACCCCGAACAAAGAGGCCACTGATCCTGGCCGCACAGTCACCGGCAGCCAGCAGCTATGTGGCCCCGCCTTTTCA-TTTATTAAGCAGAGATTAATAATGGTATATTTACGGCCTGTCTGC-GGCCGAGCGACACTGCAGCATTGATTCATTTCTGACCATAGTATTGCGGGAACAATGACACCGTTGAGT-TCGTTGCTAGATTTATCACTTGAGGAGGTG-GGAGGAGAAGGGGATTACTGCAAATAGAAAACGCACCTCTGGAAACCGTTATTTATGGGCTGCTCAGGAACTGACCCCAAGACATAGCCACGCAGTTTCCAGTAACTGGGCGCTGTGACTG-GCGGGGCCTCCCCAGGTGGTGGCCGTCGGAGGCTGTGGCCGGGA-GGTGGCCCCGGTGCTGGCCGGGCCACATGGAGAGCGTCTGGGGCAGCCGCGCCCCTCCGTCCCCAGGCCGCAGGCTGGCCACCGTGGCCGGGCGCGCACAAGATTTACACACCATCGGCGCCCACAAAGTCGACGGG-CCAGCTCAGCTTTTTCATTAGCGTCCCCACATGGCACAGCAGAGGGTTCCTACGTCACCTCCAGAATGTATTATGCAAGGGCTATTTCTGTGCTTCTGTATCTACTGAGAGGTTATGTCAGGCAGTCCATCAATGGAAACACGTGAAAGCAGGTTGTGATAGAAGGAATATTCA---------GCCCAGCCCAGCACTGGACACAGATTAGGAGTTCATAAAATATTAATATTTGTGGGCCTATGGATTTTTGTCAGCTTCTGTGGTTTAtttctcttcttttttctctttcttttttccttttcctcttA--AAAAAAA----AGTTTAAAATGCATGACATACTATCAGTTGTTAATGAGAAAGTAAAAAGTATAAGAAGTATTCTAAAAATAACAGTTAGATGTTCTTTCTGTATTCCTATTTG--TGA-TT--TTTTTTTCTTTAATGAAAAGAACCTTTGTGTTTGCACCCC-GGCGGGTTTCACTGCA--CTGAGAAGTGGACT----------GATGTAATTTAAAGTTAGTTAATATTTAAAAAGCAGTTCCTGCCCACACTCAGCATTTGTGGAGTCAAACGGAGGCTGTGCCGGTCCGTCGCTGAGACTT-----AGGAAG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168137778 1620 + 169853907 GGTCTTGCTCTGACTTTCCCCATTTGCTGCAGTTTGAGGAAGTAAAGAATTCTGTTGGAATCTTCATGTGTGTACATTTTAATTTTTAAAATAAGGGTAAAAACATTCCACCACTGCAGGTGACTGTGAAAATGAGGAGGGAGAGCTT-TGTGGA----AGGACACGGAAAATTGCTCTTAGAGCCAACAACTGCTGCTTCCTTCTCCCTGCACCCTTCAGACAGGCGCCGTTCCCGTCCACCCCATGAAGAGGCAGCATCATGCCGGGCGATGGGA---------ACA----GAGACTGCAGCGCGGA------CAGACGTTTGTGTTGCAAGCAAACACACACCTCCAGGGTAAATGTTTATTCCAGAGGCAACACCGTTCCCACGCCCAGCGAGTGTGCATTCTTTCTGGATTCAGAGCCCCACAGTTGTGTTTGTGAGTCATCAATGGTGAACGCTGGGGCCTTCTCGGGACAGGAGTGTGATCCGTGTCTCCGTTTTCAGGTGACAACACCAGTCCCCCACCCACCTCACCCCAAACAAAGAGGCCACTGATCCCGGCCGCACAGACACTGGCAGCCGGCAGCTATGCGGCCCCGCCTTTTCA-TTTATTAAGCAGAGATTAATAATGGTATATTTATGGCCTGTCTGC-GGCCGAGCGACACTGTGGCATTGATTCACCTCTGACCATAGTCTTGCGGGAACAACGACGCTGTTGAGC-TTGTTGCTAGATTTATCACTTGAGGAGGTG-GGAGGAGAAGGGGGTTACTGCAAATAGAAAACGCACCTCTGGAAACCGTTATTTATGGGCTGCTCAGGAACTGACCCCAAGACATAGTCACGCAGTTTCCAATAAGTGGGCG------------GGGGCCTCCCCAGGCGGTGGCCGTCGGAGGCTGTGGCCGGGA-GGTGGCCCCGGTGCTGGCCGGGCCACACGAACAGCATCTGGGGCAGCTGCGCCCCTCCATCCCCAGGCCGCAGTCTGGCCACCCTGGCAGGGCATGCACAAGATTTACACATCACCGGCACCCACAGAGTCAACAGA-CCAGCTCAGCTTTGTCATTAGCGTCCCCACATGGCACAGCGGAGGGTTCCCACGTCACCTCCAGAATGTATTATGCAAGGGCTATTTCTGTTTTTCTGTATCTACTGAGAGGTTATGTCAGGCAGCCCATCAATGGAAAAACATGAAAGCAGGTTGTGACAGAACGAATATTCA---------GCCCAGCCCAGCACTGGACACAGACTAGGAGTCCATAAAATATTAATCTTTGTGGGCCGATGGATTTTTGTCAGCTTCTGTGGCTTATTTAtcttcttttttctctttctttcttccttttcctcttt--AAAAAAA-AGAAATTTAAAATTCATGACATACTACCAGTTGTTAATGAGAAAGTAAAAAGTGTAAGAAGTATTCTAAAAATAGTAGTTAGCTGTTCTTTCTGTATTCCTATTTG--TGA-TT-TTTTTTTTCTTTAATAAAAAGAATCTTTGTGTTTGCGTCCT-GGCGGGTTTCACTGCA--CTGAAAAGTGGACT----------GATGTAATTTAAAGTTAGCTAATGTTTAAAAAGCGGTTGCTGCCCACACTCAGCATTTGCGGAGTCAAATGGAGACTGTGCGCGTCC-TCGCTGAGACTTATCTCAGGAAG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169092213 1631 - 170955103 GGTCTTGCTCTGACTTTCCCCATTTGCTGCAGTTTGAGGAAGTAAAGAATTCTGTTGGAACCTTCATGTGTGTACATTTTAATTTTTAAAATAAGGGTAAAAACATTCCACCACTGCAGGTGACTGTGAAAATGAGGAGGGAGAGCTT-TGTGGA----AGGACACGGAAAATTGCTCTTAGAGCCAACAACTGCTGCTTCCTTCTCCCTGCACCCTTCAGACAGGCGCCGTTCCCGTCGACCCCATGAAGAGGCAGCATCATGCCGGGCGATGGGA---------ACA----GAGACTGCAGCGCGGA------CAGACGTTTGTGTTGCAAGCAAACACACACCTCCAGGGTAAATGTTTATTCCAGAGGCAACACCGTTCCCACGCCCAGCGAGTGTGCATTCTTTCTGGATTCAGAGCCCCACAGTTGTGTTTGTGAGTCATCAATGGTGAACGCTGGGGCCTTCTCGGGACAGGAGTGTGATCCGTGTCTCCGTTTTCAGGTGACAACACCAGTCCCCCACCCACCTCACCCCAAACAAAGAGGCCACTGATCCTGGCCGCACAGACACTGGCAGCCGGCAGCTATGCGGCCCCGCCTTTTCA-TTTATTAAGCAGAGATTAATAATGGTATATTTATGGCCTGTCTGC-GGCCGAGCGACACTGTGGCATTGATTCACCTCTGACCATAGTCTTGCGGGAACAACGACGCTGTTGAGC-TTGTTGCTAGATTTATCACTTGAGGAGGTG-GGAGGAGAAGGGGGTTACTGCAAATAGAAAACGCACCTCTGGAAACCGTTATTTATGGGCTGCTCAGGAACTGACCCCAAGACATAGCCACGCAGTTTCCAGTAAGTGGGCGCTGGGACTG-GCGGGGCCTCCCCAGGCGGTGGCCGTCGGAGGCTGTGGCCGGGA-GGTGGCCCCAGTGCTGGCCGGGCCACACGAACAGCATCTGGGGCAGCCGCGCCCCTCCATCCCCAGGCCGCAGTCTGGCCACCCTGGCAGGGCATGCACAAGATTTACACATCACCGGCACCCACAGAGTCAACAGA-CCAGCTCAGCTTTGTCATTAGCGTCCCCACATGGCACAGCGGAGGGTTCCCACGTCACCTCCAGAATGTATTATGCAAGGGCTATTTCTGTTTTTCTGTATCTACTGAGAAGTTATGTCAGGCAGCCCATCAATGGAAAAACGTGAAAGCAGGTTGTGACAGAACGAATATTCA---------GCCCAGCCCAGCACTGGACACAGACTAGGAGTCCATAAAATATTAATCGTTGTGGGCCGATGGATTTTTGTCAGCTTCTGTGGCttatttatcttcttttttctctttctttcttccttttcctcttt--AAAAAAA-AGAAATTTAAAATGCATGACATACTACCAGTTGTTAATGAGAAAGTAAAAAGTGTAAGAAGTATTCTAAAAATAGTAGTTAGCTGTTCTTTCTGTATTCCTATTTG--TGA-TT-TTTTTTTTCTTTAATAAAAAGAATCTTTGTGTTTGCATCCT-GGCGGGTTTCACTGCA--CTGAAAAGTGGACT----------GATGTAATTTAAAGTTAGCTAATGTTTAAAAAGCGGTTCCTGCCCACACTCGGCATTTGCGGAGTCGAATGGAGGCTGTGCGCGTCC-TCGCTGAGACTTATCTCAGGAAG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163910714 1626 + 165299245 GGTCTTGCTCTGACTTTCCCCATTTGCTGCAGTTTGAGGAAGTAACG-ATTCTTTTGGAACCTTCATGtgtgtacattttaatttttaaaagaagggt-aAAACATTCCACCACTGCAGGTGGCTGTGAAAGTGAGGAGGGAGAGCTT-TGTGGA----AGGACACGGAAAATTGCTCTT-GAGCCAACGACTGCTGCTTCCTTCTCCTTGCACCCTTCAGACAGGCGCCGTTCCCG---ACCCCGTGAAGAGGCAGCATCATGCCGGGCGATGGGA---------ACA----GAGACTGCAGCGCGGA------CAGACGTTTGTGTTGCAAGCAAACACACACCTCCAGGGTAAATGTTTATTCCAGAGGCAACACCGTTCCCACGCCCAGCGACTGTGCATTCTTTCTGGATTCAGAGCCCCACAGTTGTGTTTGTGAGTCATCAATGGTGAACGCTGGGGCCTTCTCGGGACAGGAGTGTGATCCGTGTCTCCGTTTTCAGGTGACAACACCAGTCCCCCACCCACCTCACCCCAAACAAAGAGGCCACTGATCCCGGCCGCACAGACACTGGCAGCCGGCAGCTATGCGGCCCCGCCTTTTCA-TTTATTAAGCAGAGATTAATAATGGTATATTTATGGCCTGTCTGC-GGCCGAGCGACACTGTGGCATTGATTCACCTCTGACCATAGTCTTGCGGGAACAACGACGCTGTTGAGT-TCGTTGCTAGATTTATCActtgaggaggtg-ggaggagaagggGGTTACTGCAAATAGAAAACGCACCTCTGGAAACCGTTATTTATGGGCTGCTCAGGAACTGACCCCAAGACATAGCCACGCAGTTTCCAGTAAGTGGGCGCTGGGACTG-GCGGGGCCTCCCCAGGCGGTGGCCGTCGGAGGCTGTGGCCGGGA-GGTGGCCCCGGTGCTGGCCGGGCCACACGGACAGCGTCTGGGGCAGCCGCACCCCTCCATCCCCAGGCCGCAGTCTGGCCACCCTGGCCGGGCACGCACAAGATTTACACATCACCGGCGCCCACAGAGTCGACAGA-CCAGCTCAGCTTTGTCATTAGCGTCCCCACACGGCACAGCAGAGGGTTCCCACGTCACCTCCAGAATGTATTATGCAAGggctatttctgtttttctgtatctACTTAGAGGTTATGTCAGGCAGCCCATCAATGGAAAAACGTGAAAGCAGATTGTGACAGAACGAATAttca---------gcccagcccagcactgCACACAGACTAGGAGTCCATAAAATATTAATCTTTGTGGGCCGATGGATTTTTGTCAGCTTCTGtggcttatttctcttcttttttctctttctttcttccttttccccttt--aaaaaaa-agaaatttaaaatgcatgacATACTACCAGTTGTTAATGAGAAAGTAAAAAGTGTAAGAAGTATTCTAAAAATAGCAGTTAGCTGTTCTTTCTGTATTcctatttg--tgattt-ttttttttctttaataaaaagaatCTTTGTGTTTGCATCCT-GGCGGGTTTCACTGCA--CTGAAAAGTGGACT----------GATGTAATTTAAAGTTAGTGAATGTTTAAAAAGCGGTTCCTGCCCACGCTCAGCATTTGCGGAGTCAAATGGAGGCTGCGCGTGTCC-TCGCTGAGACTTATCTCAGGAAG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96696848 1631 + 98384682 GGTCTTGCTCTGACTTCCCCCATTTGCTGCAGTTTGAGGAAGTAACGAATTCTTTTGGAACTTTCATGTGTGTACATTTTAATTTTTAAAATAAGGGTAAAAAAATTCCACCACTGCAGGTGACTGCGAAAATGAGGAGGGAGAGCTT-TGTGGA----AGGACACGGAAAATTGCTCTTAGAGCCAACAACTGCTGCTTCCTTCTCCCTGCACCCTTCAGACAGGCGCCGTTCCGG---ACCCCATGAAGAGGCAGCATCATGCCGGGCGATGGGA---------ACA----GAGACTGCAGCACGGA------CACACGTTTGTGTTGCAAGCAAACACACACCTGCAGGGTAAATGTTTATTCCAGAGGCAACACCGTTCCCACGCCCAGCGACTGTGCATTCTTTCTGGATTCAGAGCCCCACAGTTGTGTTTGTGAGTCATCAATGGTGAACGCTGGGGCCTTCTCGGGACAGGAGTGTGCTCCGTGTCTCCGTTTTCAGGTGACAACACCAATCCCCCACCCACCTCACCCCAAACAAAGAGGCCACTGATCCCGGCCGCACAGACACTGGCAGCCGGCAGCTATGCGGCCCCGCCTTTTCA-TTTATTAAGCAGAGATTAATAATGGTATATTTATGGCCTGTCTGC-GGCCGAGCGACACTGTGGCATTGATTCACCTCTGACCATAGTCTTGCGGGAACAACGACGCTGTTGAGC-TCGTTGCTAGATTTATCACTTGAGGAGGTG-GGAGGAGAAGGGGGTTACTGCAAATAGAAAACGCACCTCTGGAAACCGTTATTTATGGGCTGCTCAGGAACTGACCCCAAGACATAGCCACGCTGTTTCCAGTAAGTGGCCGCTGGGACTG-GCGGGGCCTCCCCAGGTGGTGGCCGTCGGAGGCTGTGGCCGGGA-GGTGGCCCCGGTGCTGGCCGGGCCACACGGACAGCGTCTGGGGCAGCCGCGCCCCTCCATCCCCAGGCAGCAGTCTGGCCACCCTGGCCGGGCACGCACAAGATTTACACATCACCGGCGCCCACAGAGTCGACAGA-CCAGCTCAGCTTTGTCATTAGCGTCCCCACACGGCACAGCAGAGGGTTCCTACGTCACCTCCAGAATGTATTATGCAAGGGCTATTTCTGTTTTTCTGTATCTACAGAGAGGTTATGTCAGGCAGTCCATCAATGGAAAAACGTGAAAGGAGGTTGTGACAGAACGAATATTGA---------CCCCAGCCCAGCACTGCACACAGACTAGGAGTCCATAAAATATTAATCTTTGTGGGCCCATGGATTTTTGTCAGCTTCTGTGGCTTATTTCTCTTCTTTTTTCTCTTTCTTTCTTCCTTTTCCTCTTTAAAAAAAAA-AGAAATTTAAAATGCATGACATACTACCAGTTGTTAATGAGAAAGTAAAAAGTGTAAGAAGTATTCTAAAAATAGCATTTAGCTGTTCTTTCTGTATTCCTATTTG--TAA-TT-TTTTTTTTCTTTAATAAAAAGAATCTTTGTGTTTGCATCGT-GGCGGGTTTCACTGCA--CTGAAAAGTGGACT----------GATGGAATTTAAAGTTAGTTGATATTTAAAAAGCGGTTCCTGCCCACACTCAGCATTTGCGGAGTCAAATGGAAGCTGTGCCCGTCCGTCGCTGAGACTTAGCTCAGGAAG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169903843 1567 + 171630274 GGTCTTGCTCTGCTGTTCCCCATTGGCTGCGGTTTGGGGAAGTAACAGATTCTTTTGGAATCTTCGTGTATGTGTGTTTTGATTTTTAAAATAAAGGT-AAAAAATGCCACCGTGGCAGGTGACTGTGAAAGTGAGGAGGGAGCCCCTGTATGGAAGGCAGGACAGGAACAATTGCTCTCATAGCCAAACACTGCTGGTCCCTTCTTCCCGCACCCTCCAGACGGGCGCTGTTCCCC---ACCCCATGAAGAG---GCGTGGTGCC-AGCGATGGGA-------ACACG----CAGGCTGCAGCGTGAA------CGGGCATTCATGGTGCCAGCGGACGCACAC---CAGGGCGAATGTTTATTCC--GGGCACCG-CGTTCCCACACGCAG-------------------------------CACAGTTGTCTTTGTGAGTCATCAAGGGTGAACCCTGAGGCCTTTTGGGGACAGGGGTGTGACCCA-GTCTCCGTTTTCAGGTGACAACACCACTCCCCTGCCCACCCCACCCCAAACAAAGAGGCCACTGATCCTGGCCGCGCAGACCTGGGCAGCCAGCAGCTCTGCGGCCCCACCTTTACATTTTATTAAGCACAGATTAATAATGGTGTATTTATGGGCTGTCTGC-GGCCG-GCGACACTGTGGCCTTGATTCATTTCTGACCGTAACATTGT-GGAACAACCATGCCGTTGAGT-TCGTTGCTGGATTTATCACTCAAGGAGATG-GGCGGAGAAGGGGGCTGCCACAAATAGAAAACTCACCTCTGGAAACGGCTATTTATGGGCTGCTCGGGAACTGACCCCAAGACATGGCCACACAGTTTCCAGTAAGTGGGCGGCGTGACTG-GCGGGGCCTCCCCAGGTGGTGGCCGTCGGAGGCTGTGGCCGGGA-CGTGGCCCCGCTGCTGGCC-GGCCACAGGGACAGCCTCTCGGGGAGCCCTGCCCCTCCATCCTCAGGCCGCAGGCTGGCCACCCAGGCCGGGAGCACACAAGACTTACACACCATTGGTGCCCACAGAGTGGACAGG--CAGCTCAGCGTTCTCATTAGCGTCCTCACATGGCACAGCAGAGC-TTCCCACG-AGCCTCCAGCGTGTATTGTGCAAGAGCTAGTTCTGTGTCTCTGTATCTACTGAGCGGTCACATCCGGCCGCCCATCAGCGAAAACACGGAAAAGCAGGTTGTGTGAGAGAGAATATCCC---------GCCCGGCCCAGCACTAGACACAGATGAGGAGTCCAT-AAATACTAATATTTGCGGGCCAAGGGGCTTTTGTTGGCTTCTGTGGttt------ctcttcttttttctttctttcttccttcttctcttt--AAAAGAAAAGGGGTTTAAAATGCATGACATGCTACTACTTGTTTATGAGAAAGTGAAAGATACAAGGAGTGTGGTGGGAGTAAC----AGATGTTCTTTCTGTATTCCTGTTTG--TGA-CT--CTTTATTCTTTAATAAAAAGAAACTTTGTGTTTGCAGCCT-GGCAGGTTTCACTGCA--CTGA-AAGTGGACT----------GA-GTAGTTTAAAGGTGGTTAATATTTAAAACGTGGTT-CTGCACACGCTCCGCGTCGGCGGAGTCTCAGGGAGGTCGTCCCA---CGTCGGCGGAG----TCTCAGGGAG i calJac3.chr4 C 0 I 1690 s canFam3.chr1 56186531 1473 + 122678785 GGACTTGCGCTTATTCTCTTCCCTTGCAG-AGACTGAGAGGG----GAACTGCCTCTGAATTCT-----------GTATTAAATTTTTAAATAAGCGC--GGAAGCTCCACCTTTTCTGATGATCAGGAAAGTCAGGAGAGAAAG----GAAAGA----AGGCCCTGA----------------CCGGCACCGCTGGGTTCCCTCTCCCC----------------CGGGGTCCCCT---GCCCCCGGGACAACGAGGGTC-TCCAGGGTGCCAAGAGGTCCCGATACAGCAGGCGGCCGCGGCGCGAAAGTGGCCTGGTGGCTGCCACGCAGGTGG-----CGAGTCCGGGCTGAGTGTTTCCTCCAGCGG------CGCTGCCATCCGGAGCCCGTGTGCATTATTTCTGGATGCAGGGCTCCAGGGCTG-GCCCATGAGTCATTAGCGGCGAGGGCCAAGCCC---------------------CCGCGGCTCTGTCTTCAGGTgccggcgccgaccccgc-ccggggccgccAGCAACAAAGAGCCCACTGATCCCGCTC---------------GCCGGCCGTCCTGCAGCCCTGCCCTTTAT-TTTATGAAACAGAGATTCATGATGCCGTATTTACGGCATGTCTGCAGGCCGTGTGAC-CTGCGGCATTTATTCATTCCTGACCGTAATATC-CTAGAACAACGATGCTGTTGATTCCCACGGCTAGATTTATCACTGGAGGGGGTGCGGAGGAGAAGGCTGACTGTACACAGGAAAAATGCACTTCTGGAAACTATTATTTATGGGCTGCTCAGGAACTGACCCCAAGACACGGCCGGGCTGTTTCCAGTAAGTGGACGCGGCCACCGAGTGGGGCCTCCCCAGGTGGTGGCCGCCGG-GGCTGCGGTCGGGAGGGTGGCCCTGGTG---------------------------GCGCGGCCG-GCCCTTCCATC-----------------CCGCCTGGGCCG-------CCGAGATTGACGCCCC---GGTGCCCGCAGAGCCCACGGAGCCAGCGCCGCTCTCTCATTAGCCTGGCCACACGGCACAGCCGAGGATTCCTGCGGAACCTCCAGACTTTATTA-GTAAGAGCTGTTTTTGCTTTTCTGTATCTAATGAAAGGTTATCTCAGGCAGTCGGTCAACAGAAAGCCGAGGAGGCAGGTTGTCACCGACGGAAGGTCCAGGCGGCCCGGCTCAGCCTCGCGGGGGACAAAGAGCCGGGA-------------AATACTTGCCGGGGGATGGATTTCCACCGGCTCCAGGG----------CTCCTTTCTCTCCCTTTCTCCTTCCAGTTCC-------AAGAGAA----AATTTAAAATGCATGACACACTAGCCGTTGTTTACAAGAAAGTAAAATCT-CAACAAGTA--CTAAAACTAATGCTGGGAGGTCCCTCCTCTGTCCCTATTTTCCTGA-TG----TTTCTCTCTAACGAGGGGA----CCGCGCTAGGCCCCTGGGCAGGTGTGACTGCACCCCGGCAGCCGCACTCTCAGTGTGGGAAGGTTTGCAGGGTTAGTTAATATTTAAAAGGTGACTCATGTCCCACTTCAACGTTTACACAATCAGATGAGGTCAGTACCTGTCGGT-GATGAGA-TGATCACAGGAGA i canFam3.chr1 I 1004 C 0 a score=70489.000000 s hg38.chr6_KB021644v2_alt 121368 31 + 185823 ----CGCACAGGCACGGTGCTCGCCCTGAGAGTGA s panTro4.chr6 170709134 31 + 172623881 ----CGCACAGGCACGGTGCTCGCCCTGAGAGTGA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172463293 29 + 174210431 ----CGCACAGGCATAGCGCTCGCCCT--GAGTGA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156322964 31 + 157873769 ----CGCACGGGCACAGCGCTCGCCCTGGGAGTGA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168139398 31 + 169853907 ----CGCACAGGCACAGCGCTTGCCCTGGGAGTGA i rheMac3.chr4 C 0 I 1358 s macFas5.chr4 169093844 31 - 170955103 ----CGCACAGGCACAGCGCTTGCCCTGGGAGTGA i macFas5.chr4 C 0 I 1345 s papAnu2.chr4 163912340 29 + 165299245 ----CG--CAGGCACAGCGCTGGCCCtgggagtga i papAnu2.chr4 C 0 I 1342 s chlSab2.chr13 96698479 31 + 98384682 ----CGCACAGGCACAGCGCTTGCCCTGGGAGTGA i chlSab2.chr13 C 0 I 1353 s canFam3.chr1 56188004 35 + 122678785 GGCTTGGCTGCGCCCTGAGCCAGCCCTGGGAGGGA i canFam3.chr1 C 0 I 1339 e calJac3.chr4 169905410 1690 + 171630274 I a score=5810.000000 s hg38.chr6_KB021644v2_alt 121399 12 + 185823 GAATCGCTTGAA s panTro4.chr6 170709165 12 + 172623881 GAATCGCTTGAA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172463322 12 + 174210431 GAACTGCTTGAA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156322995 12 + 157873769 GAACTGCTTGAA i nomLeu3.chr3 C 0 C 0 e calJac3.chr4 169905410 1690 + 171630274 I e canFam3.chr1 56188039 1339 + 122678785 I e chlSab2.chr13 96698510 1353 + 98384682 I e papAnu2.chr4 163912369 1342 + 165299245 I e rheMac3.chr4 168139429 1358 + 169853907 I e macFas5.chr4 169093875 1345 - 170955103 I a score=1000.000000 s hg38.chr6_KB021644v2_alt 121411 1 + 185823 C s panTro4.chr6 170709177 1 + 172623881 C i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172463334 1 + 174210431 C i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156323007 1 + 157873769 C i nomLeu3.chr3 C 0 C 0 s calJac3.chr4 1723605 1 - 171630274 C i calJac3.chr4 n 1690 C 0 e canFam3.chr1 56188039 1339 + 122678785 I e chlSab2.chr13 96698510 1353 + 98384682 I e papAnu2.chr4 163912369 1342 + 165299245 I e rheMac3.chr4 168139429 1358 + 169853907 I e macFas5.chr4 169093875 1345 - 170955103 I a score=7371.000000 s hg38.chr6_KB021644v2_alt 121412 6 + 185823 CCAGGG s panTro4.chr6 170709178 6 + 172623881 CCAGGG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172463335 6 + 174210431 CCAGGG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156323008 6 + 157873769 TCAGGG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 1860326 6 + 170955103 CCAAGT i macFas5.chr4 n 1345 C 0 s papAnu2.chr4 1385978 6 - 165299245 CCAAGT i papAnu2.chr4 n 1342 C 0 s calJac3.chr4 1723606 6 - 171630274 CCAGAG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56188039 1339 + 122678785 I e chlSab2.chr13 96698510 1353 + 98384682 I e rheMac3.chr4 168139429 1358 + 169853907 I a score=848316.000000 s hg38.chr6_KB021644v2_alt 121418 306 + 185823 AATGAAAAGGTTATTATCCCTGACTTAGGGCCTATTCCCTTCCCCACTTACTGTTACCCTTCCCTCAGAAACATTCACAGTCGAAAATGAGGATTGAGTGTATCTCGTGAGAAGAACCACCTGGTTCTCCCGCAGAATCATAGCCCAGGATGAAAGCATTTCTCCCACTGAAAGTTGAATTTAAGGACCCAACATCTTTTCATCATATGGCACACCTCAGAAAACAAAAAC-AAAAAGTACAGAGAGAAAAGCAAACCCAGCGTCACCCACCTCGCCCGAGAGCCG-----TGCTCACTAGAGGCCAGGTGC s panTro4.chr6 170709184 306 + 172623881 AATGAAAAGGTTATTCTCCCTGACTTAGGGCCTATTCCCTTCCCCACTTACTGTTACCCTTCCCTCAGAAACATTTACAGTCGAAAACGAGGATTGAGTGTATCTCGTGAGAAGAACCATCTGGTTCTCCCGCAGAGTCATAGCCCAGGATGAAAGCATTTCTCCCACTGAAAGTTGAATTTAAGGACCCAACATCTTTTCATCATATGGCACACCTCAGAAAACAAAAAC-AAAAAGTACAGAGAGAAAAGCAAACCCAGCGTCACCCACCTCGCCCGAGAGCCG-----TGCCCACTAGAGGCCAGGTGC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172463341 306 + 174210431 AATGGAAAGGTTATTCTCCCTGACTTAGAGCCTATTCCCTTCCCCACTTACTGTTACCCTTCCCTCAGAAACATTTACAGTCGAAAATGAGGATTGAGTGTATCTCGTCAGAAGAACCACCTGGTTTTCCCGCGGAATCATAGCCCAGGATGAAAGCATTTCTCCCACTGAAAGTTGAATTTAAGGACCCAACATCTTTTCATCATATGGCACACCACAGAAAACAAAAAC-AAAAAATACAGAGAGAAAAGCAAACCCAGCGTCACCCACCTCGCCCGAGAGCCA-----TGCTCACTAGAGGCCAGGTGC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156323014 302 + 157873769 AATGAAAAGGTTATTCTCCCTGACTTAGGGCCTATTCCCTTCCCCACTTACTGTTACCCTTCCCTCAGAAACATTTACAGTCAAAAATGAGGATTGAGTGTATCTCGTCAGAAGAGCCACCTGGTTCTCCCGCAGAATCATAGCCCAGGATGAAAGCATTTCTCCCACTGAAAGTTGAATTTAAGGACCCAACGTCTTTTCATCATGTGGCACACCTCAGAAAAC----AC-AAAAAATGCAGACAGAAAAGCAAACCCAGCGTCACCCACCTCGCCCAAGAGCTG-----TGCTCACTAGAGGCCAGGTGC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 1713582 306 - 169853907 AATGAAAAGGTTATTCTCCATGACTTAGGGCCTATTCCCTTCCCCATTTCCTGTTACACCTGCCCCAGAAACATTTACAGTCGAAAACGAGGACTGAGTGTGTCTCGTCAGAAGAACCACCTGGTTCTCCTGCAGAATCACAGCCCAGGATGAAA-CATTTCTCCCACTGAAAGTTGCATCCAAGGACCCAACATCTTTTCATCATATGGCACACCTCAGAAAACAAAAACAAAAAAATACGGACAGAAAAGCAAACCCAGCGTCACCCACCTCGCCCGAGAGTGG-----TGCTCACTGGAAGCCAGGTGC i rheMac3.chr4 n 1358 C 0 s macFas5.chr4 1860332 306 + 170955103 AATGAAAAGGTTATTCTCCATGACTTAGGGCCTATTCCCTTCCCCATTTCCTGTTACACTTGCCCCAGAAACATTTACAGTCGAAAACGAGGACTGAGTGTGTCTCGTCGGAAGAACCACCTGGTTCTCCTGCAGAATCACAGCCCAGGATGAAA-CATTTCTCCCACTGAAAGTTGCATCCAAGGACCCAACATCTTTTCATCATATGGCACACCTCAGaaaacaaaaacaaaaaaatacagacagaaaagcaaaCCCAGCGTCACCCATCTCGCCCGAGAGTGG-----TGCTCACTGGAAGACAGGTGC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 1385984 303 - 165299245 AATGAAAAGGTTATTCTCCCCGACTTAGGGCCTGTTCCCTTCCCCATTTCCTGTTACACTTGCCCCAGAAACATTTACAGTCGAAAACGAGGACTGAGTGTGTCTCGTCAGAAGAACCACCTGGTTCTCCTGCAGAATCACAGCCCAGGATGAAA-TATTTCTCCCACTGAAAGTTGCATCCAAGGACCCAACATCTTTTCATCATATGGCAcacctcagaaaacaaa---aaaaaaacacagacagAAACGCAAACCCAGCGTCACCCACCTCGCCCGAGAGTGG-----TGCTCACTGGAAGCCCGGTGC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 1685276 306 - 98384682 AATAAAAAGGTTATTCTCCCCAACTTAGGGCCTATTCCCTTCCCCATTTCCTGTTACACTTGCCCCAGAAACATTTATAGTCGAAAACGAGGACTGAGTGTGTCTCGTCAGAAGAACCACCGGGTTCTCCTGCAGAATCACAGCCCAGGATGAAA-CATTTCTCCCACTGAAAGTTGCATCCAAGGACCCAACATCTTTTCATCATATGGCACGCCTCAGaaaacaaaaacaaaaaaatacagacagaaaagcaaaCCCAGCGTCACCCACCTCACCCATGAGTGG-----TGCTCACTGGAAGCCAGGTGC i chlSab2.chr13 n 1353 C 0 s calJac3.chr4 1723612 300 - 171630274 AACGGAAAGGCTGTTCCCCCTGAATTCGGGCCCATTCCCTTCCCCACTCACTGTTACCCTTCCCTCAAAAACACTTATCTTAGAAGACCAGGACTGAGTGTATCTCATCAGAAGAGCCACTT-GTTTTCCTGTAGAATCACAGCCCA-GATGAAAGCATTTCTCCCACTGGAAGTTGAATTCAAGGACCCAGCATCTTTTCATCACATGGCACACCTCAGAAA---------ATAAAACAGAGACAGAAAAGCAAACCCAGCGCCACCCATCTTGCCTGAGAGAGGGGCACTGCTCACTGG-GGCCAGGTGC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56188039 1339 + 122678785 I a score=16821.000000 s hg38.chr6_KB021644v2_alt 121724 7 + 185823 CTCATTC s panTro4.chr6 170709490 7 + 172623881 CTCATTC i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156323316 7 + 157873769 CTCATTC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 1713888 7 - 169853907 CTCATTC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 1860638 7 + 170955103 CTCATTC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 1386287 7 - 165299245 CTCATTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 1685582 7 - 98384682 CTCATTC i chlSab2.chr13 C 0 n 0 s calJac3.chr4 1723912 7 - 171630274 TTCACTC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56188039 1339 + 122678785 I e ponAbe2.chr6 172463647 0 + 174210431 C a score=1265.000000 s hg38.chr6_KB021644v2_alt 121731 2 + 185823 CT s panTro4.chr6 170709497 2 + 172623881 CT i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156323323 2 + 157873769 CG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 1713895 2 - 169853907 CG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 1860645 2 + 170955103 CG i macFas5.chr4 C 0 n 0 s papAnu2.chr4 1386294 2 - 165299245 CG i papAnu2.chr4 C 0 n 0 s calJac3.chr4 1723919 2 - 171630274 TG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56188039 1339 + 122678785 I e chlSab2.chr13 1685589 0 - 98384682 I e ponAbe2.chr6 172463647 0 + 174210431 C a score=4006.000000 s hg38.chr6_KB021644v2_alt 121733 3 + 185823 tcg s panTro4.chr6 170709499 3 + 172623881 tcg i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156323325 3 + 157873769 tcg i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 1713897 3 - 169853907 TCG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169095220 3 - 170955103 ttg i macFas5.chr4 I 1345 C 0 s papAnu2.chr4 163913711 3 + 165299245 ttg i papAnu2.chr4 I 1342 C 0 s calJac3.chr4 1723921 3 - 171630274 TCA i calJac3.chr4 C 0 n 0 e canFam3.chr1 56188039 1339 + 122678785 I e chlSab2.chr13 1685589 0 - 98384682 I e ponAbe2.chr6 172463647 0 + 174210431 C a score=4011.000000 s hg38.chr6_KB021644v2_alt 121736 2 + 185823 ct s panTro4.chr6 170709502 2 + 172623881 ct i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156323328 2 + 157873769 ct i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 1713900 2 - 169853907 CT i rheMac3.chr4 C 0 n 0 s macFas5.chr4 169095223 2 - 170955103 ct i macFas5.chr4 C 0 I 3 s papAnu2.chr4 163913714 2 + 165299245 ct i papAnu2.chr4 C 0 I 3 s calJac3.chr4 169907100 2 + 171630274 ct i calJac3.chr4 I 1690 C 0 e canFam3.chr1 56188039 1339 + 122678785 I e chlSab2.chr13 1685589 0 - 98384682 I e ponAbe2.chr6 172463647 0 + 174210431 C a score=1077.000000 s hg38.chr6_KB021644v2_alt 121738 3 + 185823 tga s panTro4.chr6 170709504 3 + 172623881 tga i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156323330 3 + 157873769 gga i nomLeu3.chr3 C 0 C 0 s calJac3.chr4 169907102 3 + 171630274 tga i calJac3.chr4 C 0 C 0 e canFam3.chr1 56188039 1339 + 122678785 I e chlSab2.chr13 1685589 0 - 98384682 I e papAnu2.chr4 163913716 3 + 165299245 I e rheMac3.chr4 1713902 0 - 169853907 I e ponAbe2.chr6 172463647 0 + 174210431 C e macFas5.chr4 169095225 3 - 170955103 I a score=4006.000000 s hg38.chr6_KB021644v2_alt 121741 3 + 185823 acc s panTro4.chr6 170709507 3 + 172623881 acc i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156323333 3 + 157873769 acc i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169095228 3 - 170955103 act i macFas5.chr4 I 3 C 0 s papAnu2.chr4 163913719 3 + 165299245 act i papAnu2.chr4 I 3 C 0 s chlSab2.chr13 96699863 3 + 98384682 acc i chlSab2.chr13 I 1353 C 0 s calJac3.chr4 169907105 3 + 171630274 atc i calJac3.chr4 C 0 C 0 e canFam3.chr1 56188039 1339 + 122678785 I e rheMac3.chr4 1713902 0 - 169853907 I e ponAbe2.chr6 172463647 0 + 174210431 C a score=268803.000000 s hg38.chr6_KB021644v2_alt 121744 131 + 185823 cgggaggcggaggttgcagtgagctgagatcgcgccactgcactccagcctgggcaacagaacaagactccatctcaaaaaaaaaaaaaaaaa-----------------GTTATAATCG---------TTTGTGAATACAC-AAGTGAAATttttgt s panTro4.chr6 170709510 140 + 172623881 cgggaggcggaggttgcagtgagctgagattgtgccactgcactccagcctgggcaacagaacaagactccatctcaaaaaaaaaaaaaaaaaaaaaaa--------aaaGTTATGATCG---------TTTGTGAATACAC-AAGTGAAATttttgt i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156323336 148 + 157873769 gaggaggcggaggttgcagtgagctgagatggtgtcactgcactccagcccgggcgacagaacaagactccatctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaCAAAGTTATGATCG---------TTTGTGAATACAC-AAGTGAAAgttttgc i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168140787 138 + 169853907 cgggaggtggaggtggcactgagctgagatctcgccaccgcactccagcctgggcgacagagcaagattccatctcaaaaaaatacataaataaata----------aaagttatgatcg---------tttgtgagtacac-aagtgaaatttttgt i rheMac3.chr4 I 1358 C 0 s macFas5.chr4 169095231 138 - 170955103 cgggaggtggaggtggcactgagctgagatctcgccaccgcactccagcctgggcgacagagcaagattccatctcaaaaaaatacataaataaata----------aaagttatgatcg---------tttgtgagtacac-aagtgaaatttttgt i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163913722 138 + 165299245 cgggaggtggaggtggcactgagctgagatcgcgccaccacactccagcctgggtgacagagcaagactccatctcaaaaaaatacataaataaata----------aaagttatgatCG---------TTTGTGGGTAGAC-AAGTGAAATTTTTGT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96699866 138 + 98384682 tgggaggtggaggtggcaatgagctgagattgtgccaccgcactccagcctgggcgacagagcaagactccatctcaaaaaaatacataaataaata----------aaagttatgatcg---------tttgtgagtacac-aagtgaaatttttgt i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169907108 138 + 171630274 caggaggtggagtttgcagtgagctgagatcacgccattgcactccagcctggatgacagagcaagactccatctcaaaaaaaaaaa--------------------aGAGGTATAATTGTTTGTGAGTTTTGTGAGTACACAAAGTGGAATCTTCGT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56188039 1339 + 122678785 I e ponAbe2.chr6 172463647 0 + 174210431 C a score=101940.000000 s hg38.chr6_KB021644v2_alt 121875 37 + 185823 aggtgaatgagtaaaccttta-----ttaaagtttgcagtaa s panTro4.chr6 170709650 37 + 172623881 aggtgaatgagtaaatcttta-----ttaaagtttgcagtaa i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172463647 42 + 174210431 AGGTGAATGAGtaaacctttattaatttaaagtttgcagtaa i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156323484 42 + 157873769 aggtgaatgagtaaacctttattaatttaaagtttgcagtaa i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168140925 42 + 169853907 aggtgaatgagtaaacctttattaatttaaagtttgcagtca i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169095369 42 - 170955103 aggtgaatgagtaaacctttattaatttaaagtttgcagtca i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163913860 42 + 165299245 AGGTGAATGAGTAAACCTTTATTAATTTAAAGTTTGCAGTCA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96700004 42 + 98384682 aggtgaatgagtaaatctttattaatttaaagtttccagtca i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169907246 33 + 171630274 TGGTGAA---------Ctttattaatttaaagatagcagtaa i calJac3.chr4 C 0 C 0 e canFam3.chr1 56188039 1339 + 122678785 I a score=640221.000000 s hg38.chr6_KB021644v2_alt 121912 243 + 185823 cttttcctgtttgggagccaataaaattgtgttcag-----aaacatttccgtagactcttgaagagcttgtagcagcaaaagaatcgtgtgtgtagtgcctGCA----------CCACTG--CCCGGGGCTGACCTCACCTGTGCCTCTGGGCCCCTCCgtaggaggatggacgacggcccttgaagatctgcgcgtctccaccc------------acctaggaacctgcgcttttccttacct----ggcaaaatggactctgcagtgcaatt s panTro4.chr6 170709687 243 + 172623881 cttttcctgtttgggagccaataaaattgtgttcag-----aaacatttccgtagactcttgaagagcttgtagCAGCAAAAGAATCGTGTGTGTAGTGCGTGCA----------CCACTG--TCCGGGGCTGACCTCACCTGTGCCTCTGGGCCCCTCCgtaggaggatggacgacggcccttgaagatctgcgcgtctccaccc------------acctaggaacctgcacttttccttacct----ggcaaaatggactctgcagtgcaact i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172463689 243 + 174210431 cttttcctgttttggagccaataaatttgtgttcag-----aaacatttctgtagactcttgaagagcttgtagcagcaaaagaattgcgtgtgtagtgcctGTT----------CCACTG--TCCGGGGCTGACCTCACCTGTGCCTCTGGGCCCCTCTGTAGGAGGATGGACTACCGCCCTTGAAGATCTGCGCATCTCCACCT------------ACCTAggaacccgcatttttccttacct----ggcaaaatggactttgcagtgcaatt i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156323526 243 + 157873769 cttttcctgtttgggagccaataaaattgtgttcaa-----aaacatttccgtaaactcttgaagagctcatagctgcaaaagaatcgtgcgtgtagtgcctGCA----------GCACTG--TCGGGGGCTGACCTCACCTGTGTCTCCGGGCCCCTCCGTAGGGGGATGGACGACGGCCCTGGAAGATCTGCGCGTCTCCAcct------------acctgggaacctgcgtttttccttacct----ggcaaaatggactttgcagtgcaatt i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168140967 242 + 169853907 cttttgctgtccgggagccaataaaattgtgttcag-----aaacatttccgtagactcttaaagagctcgtagCAGCAAAAGAATCATGTGTGTAGTGCCTGCA----------CCGCTG--TCCGTGGCTGACCGCACCAGTGTCTCT-GGCCCCTCCATAGGAGGATGGACGATGGCCCTTGAAGATCTGTTTGTCTCCACCT------------ACCTAGAGACCTGCatttttccttacct----ggcaaaatggactttgcagtgcaatt i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169095411 242 - 170955103 cttttgctgtccgggagccaataaaattgtgttcag-----aaacatttccgtagactcttaaagagctcgtagCAGCAAAAGAATCATGTGTGTAGTGCCTGCA----------CCGCTG--TCCGTGGCTGACCGCACCAGTGTCTCT-GGCCCCTCCATAGGAGGATGGACGATGGCCCTTGAAGATCTGTTTGTCTCCACCT------------ACCTAGAGACCTGCatttttccttacct----ggcaaaatggactttgcagtgcaatt i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163913902 242 + 165299245 CTTTTGCTATTCGGGAGCCAATAAAATTGTGTTCAG-----AAACATTTCTGTAGACTCTTGAAGAGCTTGTAGCAGCAAAAGAATCATGTGTGTAGTGCCTGCA----------CCGCTG--TCCGTGGCTGACCGCACCTGTGTCTCT-GGCCCCTCCATAGAAGGATGGACGATGGCCCTTAAAGATTTGTGTGTCTCCACCT------------ACCTAGAGACCTGTGTTTTTCCTTACCT----GGCAAAATGGACTTTGCAGTGCAGTT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96700046 242 + 98384682 cttttgctgtccaggagccaataaaattgtgttcag-----aaacatttccgtagactcttaaagagctcgtagCAGCAACAGAATCATGTGTGTAGTGCCTGCA----------CCGCTG--TCCGTGGCTGACCCCACCTGTGTCTCT-GGCCCCTCCATAGGAGGAGGGACGATGGCCCTTGAAGATCTGTGTGTCTCCACCT------------ACCTAgaaacctgcgtttttccttacct----gccaaaatggactttgcagtgcaatt i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169907279 255 + 171630274 catttcctgcttgggagccaa-gaaactgtgtttgg-----aaacagttccatagactctggaagagtttgtaggagcaaaagc----------cagtgcctgcagtgAGATGAGCCACGGCCTCCGGGGCTGGCCTCACCTGTGTCTCT-GGACTCCCCGCAGGGGAATGAGCCACGGCCCCTGGAGGTGGGCACCTCCCCACCTGCCTCGGAACCAGcctcggaacctgcatttctccttgcct----ggtaacaaggaccttgcactgcaatt i calJac3.chr4 C 0 I 321 s canFam3.chr1 56189378 213 + 122678785 CTGTCCCTGTTCGGG-GTTGACTAAGTTGTTTTTAAACTTCAGACATTGCAGTAGACCCTTGA----------------------------GTATTGTGCCTCCA----------ATAAGTATCCTGGGGACAACCTTATCTGT-----------TCTGtatgggaggccgggtaatagtcacagg-gacggccccgtctgaaacc------------accgtagactgtgaatacgtggtcagctccgaggcaggagggactttgcagggggttt i canFam3.chr1 I 1339 C 0 a score=1388288.000000 s hg38.chr6_KB021644v2_alt 122155 532 + 185823 aaattactgtttcaagctgggaatctgctggtgagatggggaggtgaccctggcccatctgggggtgg------ggac-------------------------------------------gctgacac-------agggttctcatagcggggaggctggggatccaagtcaggaaaaggagctgtgaccccaaaaccagaggctgaggtg-----tgacgatggggaaggggccgggagcccag--------gatgcagagagcctctcgcg------------------------------------------------------------ctgggaaaggcagtaagagggattctccctcaaagctcc----gacacctggattttagacgcctggattttagacttccggcctgcagaactgtgaggggaccaatctgtgttgttttaag-cagtgatttgcagtgatttgttacagcagcaatggaaacaaatGAGCAGTCCTAGGATCTTCATC------CCAG----CTGCT------CCTGGGGTCTCAGGATGAGACGCGGGGCCCGGTTCCCCTCACACAGGGTC-TCTGCTGGCCTCTG---------AGGGCCCCTGTCCCAGACGAGGGGCTTGGCTCACCTGC--CCCCCTAACTTGGCCTCTTTCAACATGATGGAC s panTro4.chr6 170709930 532 + 172623881 aaattactgtttcaagctgggaatctgctggtgagacggggaggcgaccctggcccatctgggggtgg------ggac-------------------------------------------gctgacac-------aggtttctcatagcggggaggctggggatccaagtcaggaaaaggagctgtgaccccagaaccagaggctgaggtg-----tgacgatggggaaggggccgggagcccag--------gatgcagagagcctctcgct------------------------------------------------------------ctgggaaaggcagtaagagggattctccctcaaagctcc----gatacctggattttagacgcctggattttagacttctggcctgcagaactgtgaggggaccaatctgtgttgttttaag-cagtgatttgcagtgatttgttacagcagcaatggaaacaaatGAGCAGTCCTAGGATCTTCATC------CCAG----CTACT------CCTGGGGTCTCAGGATGAGACGCGGGGCCCGGTCCCCCTCACGCAGGGTC-TCTGCTGGCCTCTG---------AGGGCCCCTGTCCCAGACGAGGGGCTTGGCTCACCTGC--TCCCCTAACTTGGCCTCTTTCAACATGATGGAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172463932 531 + 174210431 aaattgctgtttcaagctgggaatctgctggtgagatggagaggtgatcctggcccatcagggggtgg------ggac-------------------------------------------gctgacac-------agggttctcatagcggggaggctgggg-tccaagtcaggaaaaggagctgtgaccccagtaccagaggttgaggtg-----tgacgatggggaaggggccgggagcccag--------gatgcagagagcctctcatg------------------------------------------------------------ctgggaaaggcagtaagagggattctccctcaaagctcc----gacacctggattttagacgcctggattttagacttccagcctgcagaactgtgaggggatcaatctgtgttgttttaag-cagtgatttgcagtgatttgttacagcagcaatggaaacaaatGAGCAGTCCTAGGATCTTCATC------CCAG----CTGCT------CCTGGGGTCTCAGGATGAGACGCGGGGCCTGGTCCCCCTCCCGCAGGGTC-TCTGCTGGCCTCTG---------AGGGCCCCTGTCCCAGGCGAGGGGCTTGGCTTACCTGC--CCCCCTAACTTGGCCTCTTTCAACGTGATGGAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156323769 515 + 157873769 aaattactgtttcaagctgggaatctgctggtgagatggggaggtgaccctggcccatctgggggtgg------gggc-------------------------------------------gctgacac-------aaggttctcatagcggggaggctgggggtccaagtcaggaaaaggagctgtgaccccagaaccagaggctgaggtg-----tgatgatggggacagggccgggagcccca--------gatgcagagagcctctcgca------------------------------------------------------------ctgggaaaggcagtaagagcgattctccctcaaagctcc----gaca---------------cctggattttagacttccggcctgcagaac--tgagggaatcagtctgtgttgttttaag-cagtgatttgcggtgattggttatagcagcaatggaaacaaatGAGCAGTCCTAGGAACTTCATC------CCAG----CTGCT------CCTGGGGTCTCAGGATGAGACGCGGGGCCCGGTCCCCCTCCCGCAGGGTC-TCTGCTGGCCTCTG---------AGGGCCCCTGTCCCAGGCGAGGGGCTTGGCTCACCTGC--CCCCCTAACTTGGCCTCTTTCAACATGATGCAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168141209 537 + 169853907 aaattactgtttcaagctgggaatctgctggtgagatggggaggtgaccctggcccatctgggggtga------ggac-------------------------------------------gctgacacagtcacaaggcttctcatagtagagaggttggggatccaagttaggaaaaggagctgtgaccccagaaccagaggctgaggtg-----tggtgatggggaaggggcc--------------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn------------------------------nnnnnnnnn----gacacctggacttcagatgcctggatttcagacttgcagcctgcagaactatgagggtatcaatctgtgttgttttaag-cagtgatttgcagtgatttgttacagcagcaatggaaacaaaCGAACAGTCCTAGGACCGTGATC------GCAG----AGGCT------CCTGGGGTCTCAGGATGAGATGCGGGGCCCGCTCCCCCTCCTGCAGGGTC-TCTGCTGGCCTCTG---------AGGATCCCTGTTCCAGACGAGGGG-TTGGCTCACCTGC---CCCCTAACTTGGCATCTTCCAACATGATGGAT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169095653 537 - 170955103 aaattactgtttcaagctgggaatctgctggtgagatggggaggtgaccctggcccatctgggggtga------ggac-------------------------------------------gctgacacagtcacaaggcttctcatagtagagaggttggggatccaagttaggaaaaggagctgtgaccccagaaccagaggctgaggtg-----tggtgatggggaaggggccgggagcccag--------gatggagggagcctctcacg------------------------------------------------------------ctgggaaaggcagtaagagggattctccctgaaggctcc----gacacctggacttcagatgcctggatttcagacttgcggcctgcagaactatgagggtatcaatctgtgttgttttaag-cagtgatttgcagtgatttgttacagcagcaatggaaacaaaCGAACAGTCCTAGGACCGTGATC------GCAG----AGGCT------CCTGGGGTCTCAGGATGAGATGTGGGGCCCGCTCCCCCTCCTGCAGGGTC-TCTGCTGGCCTCTG---------AGGATCCCTGTTCCAGACGAGGGG-TTGGCTCACCTGC---CCCCTAACTTGGCATCTTCCAACATGATGGAT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163914144 581 + 165299245 AAATTACTGTTTCAAGCTGGGAATCTGCTGGTGAGATGGGGAGGTGACCCTGGCCCATCTAGGGGTGA------GGACGCTGACACAGTCACAAGGCTTCTCATAGTGGGGGGATGAGGATGCTGACACAGTCACAAGGCTTCTCATAGTGGGGAGGCTGGGGATCCAAGTTAGGAAAAGGAGCTGTGACCCCAGAaccagaggctgaggtg-----tggtGATGGGGAAGGGGCCGGGAGCCCAG--------GATGGAGGGAGCCTGTCACA------------------------------------------------------------CTGGGAAAGGCAGTAAGAGGGATTCTCCCTGAAGGCTCC----GACACCTGGACTTCAGAtgcctggatttcagacttgtggcctgcagaactgtgaggggatcaatctgtgttgttttaag-cagtGATTTGcagtgatttgttacagcagcaacggAAATAAACGAGCAGTCCTAGGACCATGATC------TCAG----CTGCT------CCTGGGGTCTCAGGAGGAGATGCGGGGCCCGCTCCCCCTCCTGCAGGGTC-TCTGCTGGCCTCTG---------AGGATCCCTGTTCCAGACGAGGGGCTTGGCTCACCTGC---CTCTTAACTTGGCATCTTCCAACATGATGGAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96700288 538 + 98384682 aaatgactgtttcaagctgggaatctgctggtgagatggggaggtgaccctggcccatctgggggtga------ggac-------------------------------------------gctgacacagtcacaaggcttctcatagtagagaggttggggatccaagttaggaaaaggacctgtgaccccagaaccagaggctgaggtg-----tggtgatggggaaggggccgggagcccag--------gatggagggaggctctcacg------------------------------------------------------------ctgggaaaggcagtgagagggattctccctgaaggctcc----gacacctggacttcagatgcctggatttcagactcgcggcctgcagaactgtgaggggatcagtctgtgttgttttaag-cagtgatttgcagtgatttgttacagcagcaaaggaaacaaaCGAGCAATCCTAGGAATGTGATC------CCAG----CGGCT------CCTGGGGTCTCAGGATGAGATGCGGGGCCTGCTCCCCCTCCTGCAGGGTC-TCTGCTGGCCTCTG---------AGCATCCCTGTTCCAGACGAGGGGCTTGACTCACCTGC---CCCCTAACTTGGCATCTTCCAACATGATGGAC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169907855 557 + 171630274 aaattactg-tccaagccaggaatctgctggggagatggggagatgatcctggcacacctcagggcggggggctgggc-------------------------------------------actgacgcagtcacaagggttcccatagtggggaagcaggggacccaagttaggaaaaggagctgggaccccagagccagaggttgaggtg-----tgaccacagggaaggggccaggagcccaggagccaaagatgcagggagcctctcacg------------------------------------------------------------ccggaaaaggcagtcagagggatggtccctgagggctcttctagacgcctggatttcagacacctagattctgtacttccgg-ctgcagaactgtgggggaatcaatccgtgctgtcttcag-ccac-atttgcagtgacatgttacagcgccattggaaacaaatGAGCAGTCCTAGGAGCTGCATC------CCAGCTGCCTGCT------CCTCAGACCTCAGGGTGAGATGCGGGGCCCCATCCGCCTCCAGCAGGGTC-TCTGCCAGCCTCTG---------AGGG-CCCTGCCCTGGGTGAGGGGCTCAACACACCTGC--CTCTCTAGCTCGGTATCTTCCAACATGATGGAC i calJac3.chr4 I 321 I 96 s canFam3.chr1 56189591 509 + 122678785 gggttaagattccacgctgggggcctccccactagatggggacatggtcctgggttgtccaggggcca------gggt-------------------------------------------catcataa-------agg--tcttgtaaggagaggccaaggggtcagggctagga------------accagacagctggagcttggaggggcccttaaagacagag--ggaggctgtggccgag--------gtacgcaggtgtctctagaa------------------------------------------------------------gctggaaaggcaagaaacaggtttccctc-agaggcacc----aaaaggaactctgctgacatcttaactgcagacttttcacctccaaaaccaaaagagagtaaatctgtgttgttttaatccactggtttgccttgatttatgata-------taataacaagaggaaagtaacaGGTCCCTCAGCTACTGACCAG----CTACTCGTGCACCTCAGGCTTCTGGCTA----GCGGG--------CCTCTCTTTTGGGGTCTTCTGCTGGTGTTTGTGTTTGTGAGGGGTTGCTGACCTGGACTGGGGA-----CCCCCCCGCACCCACCTCTCTCGCCTTGTTTC------------ i canFam3.chr1 C 0 C 0 a score=878077.000000 s hg38.chr6_KB021644v2_alt 122687 381 + 185823 ATCGTTCTGCTCTCCAGCTGCTCAGAGGGCAAGGCCTGCACAGAGGCTGTGGTCCATGGATTGGAGTTTGTGGCCCAGCTGTGGGGAGTATGGAGAGAAAGAGCAGGAGATACGCTGGGGTGCTGGGGACAGGGAGATCCCAGGCCAGGCAGGTGCCAACCTGCAGGCTGTTGGGCACAGAGTGGGTTGTTCTCTAGGAGTGAGATGCCAAGGTTTCGAATGTGCCCAGCATTAAGGATTCAGAGATACCTAA-ATCAGGAAGATGGCCAGCCTAGGACAGATTAGGAATACCAGCAGATC---CTTT-TTTTAAAAAA-GGTAGACTAAACTC---------GTGTTTCAGCTGTGCAAGATTAATACTGATTATAATCACCCATGCGACTTGCT s panTro4.chr6 170710462 382 + 172623881 ATCGTTCTGCTCTCCAGCTGCTCAGAGGGCAAGGCCGGCACAGAGGCTGTGGTCCATGGATTGGAGTTTGTGGCCCAGCTGTGGGGAGTATGGAGAGAAAGAGCAGGAGATACGCTGGGGTGCTGGGGACAGGGAGATCCCAGGCCAGGCAGGTGCCCACCTGCAGGCTGTTGGGCACAGAGTGGGTTGTTCTCCAGGAGTGAGATGCCAAGGTTTCGAATGTGCCCAGCATTAAGGATTCAGAGATACCTAA-ATCAGGAAGATGGCCAGCCTAGGACAGATTAGGAATACCAGCAGATC---CTTT-TTTTAAAAAAAGGTAGACTAAACTC---------GTGTTTCAGCTGTGCAAGATTAATACTGATTATAATCACCCATGCGACTTGCT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172464463 381 + 174210431 ATGTTTCTGCTTTCCAGCTGCTCAGAGGGCAAGCCCGGCACAGAGGCTGTGGTCCATGGATTGAAGTTTGTGGCCCAGCTGCGGGGAGTATGGAGAGAAAGAGCAGGGGATACGCTGGGGTGCTGGGGACAGGGAGATCCCAGGCCGGGCAGGTGCC-ACCTGCAGGCTGTTGGGCACAGAGTGGGTTGTTCTCTAGGAGTGAGATGCCAAGGTTTCGAATGTGCCTAGCATTAAGGATTCAGAGATACCTAA-ATCAGGAAGATGGCCAGCCTAGGATGGATTAGGAATACCAGCAGATC---CTTT-TTTTAAAAAAAGGTAGACTAAACTC---------GTGTTTCAGCTGTGAAAGATTAATACTGATTATAATCACCCACGAGACTTGCT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156324284 383 + 157873769 ATGGTGCTGCTCTCCAGCTGCTCAGAGGGCAAGGCCGGCACAGAGGCCGTGGTCCATGGATTGGAGTTTGTGGCTCAGCTGCGGGGAGTATGGAGAGAAAGAGCAGGGGATACGCTGGGGTGCTGGGGACAGGGAGATTCCAGGCCGGGCAGGTGCCCACCTGCAGGCTGTTGGGCACAGAGTGGGTTGTTCTCTAGGAGTGGGATGCCAAGATTTCGAATGTGCCCAGCATTAAGGATTCAAAGATACCTAA-ATCAGGAAGATGGCCAGCCTAGGATGGATTAGGAATACCAGTGGGTC---ATTTCTTTTTAAAAAAGGTAGACCGAACTC---------GTGTTTCAGCTGTGAAAGATTAATACTGATTATAATCACCCATGCGACTTGCT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168141746 383 + 169853907 GTGGTGCTGCTCTCCAGCTGCTCAGAGGGCGAGGCCAGGACAGGGGCTGTGCTCCATGGATGGGAGTTTGTGGCCCAGTTGTGGGGAGTATGGAGAGAAAGAGCAGGGGATGCGCTGAGGTGCTGGGGACAGGGAGACCCCAGGCCGGACAGGTGCCCACCTGCAGGCTGTTGGGCACAGAGTGGGCTGTTCTCTAGGAGTGAGATGCCAAGGTTTCGAATGTGCCCAGCATTAAGGATTCAAAGATACCTAATATCAGGAAGATGGCCAGCCTAGGACGGATTAGGAATACCAGTAGATC-TTTTTT-TTTTTAAA---GGTAGACTAAAAAA--------GGTGTTTCAGCTGTGAAAGATTAATACTGATTATAATCACCCAAGTGACTTGCT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169096190 384 - 170955103 GTGGTGCTGCTCTCCAGCTGCTCAGAGGGCGAGGCCAGGACAGGGGCTGTGCTCCATGGATGGGAGTTTGTGGCCCAGTTGTGGGGAGTATGGAGAGAAAGAGCAGGGGATGCGCTGAGGTGCTGGGGACAGGGAGACCCCAGGCCGGACAGGTGCCCACCTGCAGGCTGTTGGGCACAGAGTGGGCTGTTCTCTAGGAGTGAGATGCCAAGGTTTCGAATGTGCCCAGCATTAAGGATTCAAAGATACCTAATATCAGGAAGATGGCCAGCCTAGGACGGATTAGGAATACCAGTAGATCTTTTTTT-TTTTTAAA---GGTAGACTAAAAAA--------GGTGTTTCAGCTGTGAAAGATTAATACTGATTATAATCACCCAAGTGACTTGCT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163914725 381 + 165299245 GTGGTGCTGCTCTCCAGCTGCTCAGAGGGCGAGGCCGGGACAGGGGCTGTGCTCCATGGATGGGAGTTTGTGGCCCAGTTGCGGGGAGTATGGAGAGAAAGAGCAGGGGATGCACTGGGGTGCTGGGGACAGGGAGACCCCAGGCCGGGCAGGTGCCCACCTGCAGGCTGTTGGGCACAGAGTGGGCTGTTCTCTAGGAGTGAGATGCCAAGGTTTCGAATGTGCCCAGCATTAAGGATTCAAAGATACCTAATATCAGGAAGACGGCCAGCCTAGGACGGATTAGGAATACCagtagatc---tttt-tttttaaa---ggtagacTAAAAAA--------GGTGTTTCAGCTGTGAAAGATAAATACTGATTATAATCACCCAAGTGACTTGCT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96700826 382 + 98384682 GTGGTGCTGCTCTCCCGCTGCTCAGAGGGCGAGGCCGGGACAGGGGCTGTGCTCCATGCATGGGAGTTTGTGGCCCAGTTGCGGGGAGTATGGAGAGAAAGAGCAGGGGATGCGCTGGGGTGCTGGGGACAGGGAGACCCCAGGCCGGGCAGGTGCCCACCTGCAGGCTGTTGGGCACAGAGTAGGTTGTTCTCTAGGAGTGAGATGCCAAGGTTTCGAATGTGCCCGGCATTAAGGATTCAAAGATACCTAATATCAGGAAGACAGCCAGCCTAGGACGGATTAGGAATACCAGTAGATC--ATTTT-TGTTTAAA---GGTAGACTAAAAAA--------GGTGTTTCAGCTGTCAAAGATTAATACTGATTATAATCACCCAAGTGACTTGCT i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56190100 259 + 122678785 --------------------------------------CACAAA---------------------------------------GGAAACAGGAAGAGACAG-------GAAGAGATGGTAGACGGGGGCCTGTGGGGACCCA--CC-------TGCCCAGCAGGAAG-TGTGAAGCATG--------TGCTCCCTTGGGGTGCAATGC----------------ATCTGGATCAAGGA-TCAGAAGCTCACAGTATCAGGA--------AGCCTTGAATGCATTTTAAGTACTATCGGGTC------T-TTTAAAAA---GAAAAAACAAACCATCTCCACGTGGGTTCTAGCTGCGGAAATGTAATACTGATTAAAACTAACCACGTGACTTCCT i canFam3.chr1 C 0 I 28 e calJac3.chr4 169908412 96 + 171630274 I a score=116930.000000 s hg38.chr6_KB021644v2_alt 123068 48 + 185823 AATTATTTTTATCAAAACTGACCACAAAGGGTATTTCCAGATGCCAGG s panTro4.chr6 170710844 48 + 172623881 AATTATTTTTATCAAAACTGACCACAAAGGGTATTTCCAGATGCCAGG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172464844 48 + 174210431 AATTATTTTTATCAAAACTGACCACAAAGGGTATTTCCAGATGCCAGG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156324667 48 + 157873769 AATTATTTTTATCAAAACTGACCACAAAGGGTATTTCCAGATGCCAGG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168142129 48 + 169853907 AATTATTTTCATCAAAACTGACCACAAAGGATATGTCCAGATGCCAGG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169096574 48 - 170955103 AATTATTTTCATCAAAACTGACCACAAAGGATATGTCCAGATGCCAGG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163915106 48 + 165299245 AATTATTTTCATCAAAACTGACCACAAAGGGTATGTCCAGATGCCGGG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96701208 48 + 98384682 AATAATTTTCATCAAAACTGACCACAAAGGGTATGTCCAGATGCCGGG i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169908412 96 + 171630274 I e canFam3.chr1 56190359 28 + 122678785 I a score=939517.000000 s hg38.chr6_KB021644v2_alt 123116 340 + 185823 GTAAAAACAGAGCCA-GGCACTTTTATTCACTGATTATTCA---TCCTTTTATTCTTGGCTTGTCCAGGAGTCCGGAGCTATTTTAAACAGCATCATTAGAACTGTCTCTGCAAACCCCGTCCGCTGGTGTGCTGACTGTGGATAGGTCTCCGCCAAGCCGTGGCTCCTGTCGTCCTGACATAGACGCCGCCATTTTAACGCTGACCTCCAGGGGCTGGTGGCTGGACCTGCGCGGCCATCACTGCCCAGACCCAGCAGAACCC------CATGGTTGCACAC--ATCTCCCACTAACATTCGGCATCAAAAGTCAGGGAATCGACGTTTATTGCGAAGTTCAAGACGGCTC s panTro4.chr6 170710892 344 + 172623881 GTAAAAACAGAGCCA-GGCACTTTTATTCACTGATTATTCA---TCCTTTTATTCTTGGCTTGTCCAGGAGTCCAGAGCTATTTTAAACAGCATTATTAGAACTGTCTCTGCAAACACCGTCCGCTGGTGTGCTGACTGTGGACAGGTCTCCGCCAAGCCGTGGCTCCTGTCGTTCTGACATAGACGCCGCCATTTTAACGCTGACCTCCAGGGGCTGGTGGCTGGACCTGCGCGGCCATCACTGCCCTGAACCAGCAGCCCCG--TGGGCGTGGTTGCACAC--GTCTCCCACTAACATTCGGCATCAAAAGTCAGGGAATCGACGTTTATTGCGAAGTTCAAGACAGCTC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172464892 346 + 174210431 GTAAAAACAGAGCCA-GGCACTTTTATTCACTGATTGTTCA---TCATTTTATTCTTGGCTTGTCCAGGAGTGTAGAGCTATTTTAAACAGCATCATTAGAACTGTCTCTGCAAACACCGTCCACTGGTGTGCTGACTGTGGACAGGTCTCCGCCAAGCCGTGGCTCCTGTCATCCTGACATAGACGCTGCCATTTTAACGCTGACCTCCAGGGGCTGGTGGCTGGACCTGCGCAGCCATCACTGCCCAGACCCAGCAGAACCCCGTGGGCGTGGTTGCACAC--ATCTCCCACTAACATTCAGCATCAAAAGTCAGGTAATCCATGTTTATTGCAAAGTTCAAGACAGCTC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156324715 346 + 157873769 GTAAAAACAGAGCCA-GGCACTTTTATTCACTGATTGTGCA---TCCTTTTATTCTTGGCTTGTCCAGGAGTCCAGAGCTATTTTAAACAGCATCATTAGAAGTGTCTCTGCAAACACCGTCCACTGGTGTGCTGACCGTGGACAGGTCTCCGCCAAGCTGTGGCTCCTGTCATCCTGACATAGACGCTGCCATGTTAACGCTGACCTCCAGGGGCTGGTGGCTGGACCTGCTTGGCCATCACTGCCCAGACCCAGCAGAACCCCATGGGCATGGTTGCACAC--ATCTCCCACTAACATTCAGCATCAAAAGTCAGGAAATCGACGTTTATTGCGAAGTTCAAGACAGCTC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168142177 346 + 169853907 GTAAAAACAGAGCCA-GGCAGTTTTATTCACGGATTGTTCA---TCCTTTTATTCTTGGCTTATCCAGGAGTCCAGAGCTATTTTAAACAGCATCGTTAGAACCGTCTCTGCAAACACTGTCCTCTGGTGTGCTGGCCGTGGACAGGTCTCCGCCAAGTCGTGGCTCCTGTCATCCTGACTTAGATGCTGCTGTTTTAACACTGACCTCAAGGGACTGGTGGCTGGACATGCGCGGCCGTCACTGCCCCAACCCAGCAGAACCCCGTGGGCGTGGCTGCACGC--GTCTCCCACTAACGTTCAGCATCGAAAGTCGGGGAATCCACATTTATTGCAAAGTTCAAGACAGCTC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169096622 346 - 170955103 GTAAAAACAGAGCCA-GGCAGTTTTATTCACGGATTGTTCA---TCCTTTTATTCTTGGCTTATCCAGGAGTCCAGAGCTATTTTAAACAGCATCGTTAGAACCGTCTCTGCAAACACTGTCCTCTGGTGTGCTGGCCGTGGACAGGTCTCCGCCAAGTCGTGGCTCCTGTCATCCTGACTTAGATGCTGCTGTTTTAACACTGACCTCAAGGGACTGGTGGCTGGACCTGCGCGGCCGTCACTGCCCCAACCCAGCAGAACCCCGTGGGCGTGGCTGCACGC--GTCTCCCCCTAACGTTCAGCATCGAAAGTCGGGGAATCCACATTTATTGCAAAGTTCAAGACAGCTC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163915154 346 + 165299245 GTAAAAACAGAGCCA-GGCAGTTTTATTCACGGATTGTTCA---TCCTTTTATTCTTGGCTTACGCAGGAGTCCAGAGCTATTTTAAACAGCATCGTTAGAACCGTCTCTGCAAACACTGTCCGCTGGTGTGCTGGCCATGGACAGGTCTCCGCCAAGCCGTGGCTCCTGTCATCCTGACTTAGATGCTGCTGTTTTAACACTGACCTCAAGGGACTGGTGGCTGGACCTGCGTGGCCGTCACTGCCCCAACCCAGCAGAACCCCGTGGGCGTGCCTGCACGC--GTCTCCCACTAACATTCAGCATCGAAAGTCGGAGAATCCACATTTATTGCAAAGTTCAAGACAGCTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96701256 347 + 98384682 GTAAAAACAGAGCCAGGGCAGTTTTATTCACTGATTGTTCA---TCCTTTTATTCTTGGCTTATCCACTAGTCCAGAGCTATTTTAAACAGCATCGTTAGAACTGTCTCTGCAAACACTGTCCTCTGGTGTGCTGGCCATGGACAGGTCTCCGCCAAGCCGTGGGTCCTGTCGTCTTGACTTAGATGCTGCCCTTTTAACGCTGACCTCAAGGGACTGGTGGCTGGACCTGCACCGCTGTCACTGCCCCAACCCAGCAGAACCCCGTGGGCACGTCTGCACGC--GTCTCCCACTAACGTTCCGCATCGAAAGTCAGGGAATCCACATTTATTGCAAAGTTCAAGACAGCTC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169908508 346 + 171630274 GCAAAACCCTAGCCA-GGCACTTTTATTCACTGATTGATTGTTCTCCTTGTATTC-TGGCTTGTCCAGGAGTCTAGAGCTCCTTTCAACTGCATCGTTAGAATCATCTCTGCAGGCACT-TCGGCTGGTGTGCTGACCGTGG-CAGGTCTCTGCCAGGCCTCGGCTCCTGTCAGCCTGACGTGGATGCTGCCATGTTCACGCTGACCTCAGGGGGCTGGCGGCTGGACCTGCATGGCCGTCCCTGTCCCGATACAGCAGAGCCCCGTGGACGTGGCTGCACACGTGTCTGCCACTAACCTTCAACATCTAAAGTCGGAGAGTTGACATTTAT--CAGAGTGGAAGACAGCTC i calJac3.chr4 I 96 T 442 e canFam3.chr1 56190359 28 + 122678785 I a score=13496.000000 s hg38.chr6_KB021644v2_alt 123456 5 + 185823 ACTGG s panTro4.chr6 170711236 5 + 172623881 ACTGG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172465238 5 + 174210431 ACTGG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156325061 5 + 157873769 ACTGG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168142523 5 + 169853907 ACTGG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169096968 5 - 170955103 ACTGG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163915500 5 + 165299245 ACTGG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96701603 5 + 98384682 ACTGG i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169908854 442 + 171630274 T e canFam3.chr1 56190359 28 + 122678785 I a score=335630.000000 s hg38.chr6_KB021644v2_alt 123461 140 + 185823 TCTGGATATTCTGTTTTATGTCTT--------------ACTTGACTACACACTTAAACTCTATGAAAAT-GGTTCTGTGTCTGTTCTCTAAGATTAGGAGCTCCCTTCTTTCA------CAAATAAGGGAAAAGTACACTGAAAAAAAATGTTTGTAAGTA s panTro4.chr6 170711241 146 + 172623881 TCTGGATATTCTGTTTTATGTCTT--------------ACTTGACTACACACTTAAACTCTATGAAAAC-GGTTCTGTGTCTGTTCTCTAAGATTACGAGCTCCCTTCTTTCATATCCACAAATAAGGGAAAAGTACACTGAAAAAAAATGTTTGTAAGTA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172465243 145 + 174210431 TCTGGATATTCTGTTTTATGTCTT--------------ACTTGACTATACACTTAAACTCTATGAAAACAGGTTCTGTGTCTGTTCTCTAAGATTAGTAGCT-CCTTCTTTCATATCCACAAATAAGGGAAAAGTACACC-AAAAATAATGTTTGTAAGTA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156325066 141 + 157873769 TCTGGATATT---GTTTAAGTCTT--------------ACTTGACTACACACTTAAACTCTACGAAAACAGGTTCTGTGTCCGTTCTCTAAGATTAGGAGCTCCCTTCTTTCATATCCACACGTAAGGGAAAAGTACACC-GAAAAAAATGTTTGTAAG-- i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168142528 160 + 169853907 TCTGGATATTCTGTTTTATGTCTTGACTACACACTTAAACTTGACTACACACTTAAACTCTATGAAAACAAGTTCTGTGTCTGTTCTCTGAGATTAGTAACTCCCTTCTTTCATATCCACAGATAAGGGAAAAGTACACC-GAAAATAATGTTTGTAGGTA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169096973 160 - 170955103 TCTGGATATTCTGTTTTATGTCTTGACTACACACTTAAACTTGACTACACACTTAAACTCTATGAAAACAAGTTCTGTGTCTGTTCTCTGAGATTAGTAACTCCCTTCTTTCATATCCACAGATAAGGGAAAAGTACACC-GAAAATAATGTTTGTAGGTA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163915505 146 + 165299245 TCTGGATATTCTGTTTTATGTCTT--------------ACTTGACTACACACTTAAACTCTATGAAAACAGGTTCTGTGTCTGTTCTCTGAGATTAGTAACTCCCTTCTTTCATATCCACAAATAAGAGAAAAGTACACC-GAAAATAATGTTTGTAAGTa i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96701608 146 + 98384682 TCTGGATATTCTGTTTTACGTCTT--------------ACTTGACTACACACTTAAACTCTATGAAAACAGGTTCTGTGTCTGTTCTCTGAGATCAGTAACTCCCTTCTTTCATATCCACAAATAAGGGAAAAGTACACC-GAAAATAATGTTTGTAAGTA i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56190387 144 + 122678785 TTTAGATATTTTGTTCCACATTTT--------------ATTTGACTACAAATATAAAGTCTAAG-ATATATATTCTGGGCTTATACTTAAAAGCTAAT-GTTTTTTTTTTTTTCATTTCCAAAAAAAGGACAAGTGGTTC-AACTAGAATATATGAAAGTA i canFam3.chr1 I 28 C 0 e calJac3.chr4 169908854 442 + 171630274 T a score=696759.000000 s hg38.chr6_KB021644v2_alt 123601 312 + 185823 ATTTCTAggccaggcgcagtggctcacgcctgtaatcccagcactttgagaggccaagacaggtggattacctgaagtcagaagtgcaataccagcctggtcaatatggtgaaaccccgtctctaccaaaaatacaaaacgttagccaggcgtggtgatgtgtgcctgtggtcccagctactcaggaggctgaggcaggagaatcgcttgaacctaggaggcagaggttgtagtgagccaagatcgcgccactgcactccagcctcagcgacagagcaagactccatctc------aaaaaaaaaaaaaa---------ggaaaTCT s panTro4.chr6 170711387 314 + 172623881 ATTTCTAggccaggcgcagtggctcacgcctgtaatcccagcactttgagaggccaagacgggtggatcacctgaagtcagaagtgcaataccagcctggtcaatacggtgaaaccccgtctctaccaaaaatacaaaacgttagccaggcgtggtgatgtgtgcctgtggtcccagctgctcaggaggctgaggcaggagaatcgcttgaacctaggaggcagaggttgtagtgagccaagatcgcgccactgcactccagcctcagcgacagagcaagactccatctc------aaaaaaaaaaaaaa-------aaggaaaTCT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172465388 320 + 174210431 ATTTCTAggctgggcgcagtggcttgcgcctgtaatcccagcactttgagaggccaagacaggtggattacctgaagtcagaagtgcaagaccagcctggtcaatacagtgaaaccccgtctctactaaaaatacaaaacgttagccgggcgtggtaatgtgcacctgtggtcccagctactcaggaggctgaggcaggagaatcgcttgaaccttggaggcagaggttgtagtgagctaagatcgtgctactgcactccagcctcaacgacagagcgagactccatctc------aaaaaaaaaaaaaa-aaaaaaaaggaaaGCT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156325207 315 + 157873769 -----TAggccaggcgcaatggctcacgcctgtaatcccagcactttgagaggctgagacaggcggattacctgaagtcagaagtgcaagaccagcctggtcaacatggtgaagccccgtctctactacaaatacaaagtgttagccaggcgtggtgatgtgtgcctgtggtcccagctactcaggaggctgaggcaggagaatcgcttgaacc-aggaggcggaggttgtagtgagccaagactgcgccactgcactccagcctcagcaacacagcgagactccatctc------aaaaaaaaaaaaaaaaaaaaaaaggaaaGCT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168142688 318 + 169853907 ATTGGAATACCAGTAGATCtggctcacacctgtaatcccagcactttgagatgccgaggcagggagattacctgagatcagaagtgcaagaccagcctggtcaatacagtgaaatcctgtctctactaaaaatacaaaacattagtcaggtgtggtgatgtgtgcctgtggtccaagctactcaggaggctgaggcagaagaatcacttgaacccaggaggcggaggttgtagtgagccgagatcgtgccactgcactctagccttggcgacagagcgagattccatctc---------aaaaaaaaaaaaaaaagaaagaaaaGCT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169097133 327 - 170955103 ATTTCTAggccaggcgcagtggctcacacctgtaatcccagcactttgagaggccgaggcaggcagattacctgagatcagaagtgcaagaccagcctggtcaatacagtgaaatcctgtctctactaaaaatacaaaacattagtcaggtgtggtgatgtgtgcctgtggtccaagctactcaggaggctgaggcagaagaatcacttgaacccaggaggcggaggttgtagtgagccgagatcgtgccactgcactctagccttggcgacagagcgagattccatctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaagaaaaGCT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163915651 323 + 165299245 atttctaggccaggtgcagtggctcacgcctgtaatcccagcactttgggaggccgaggcaggcagattacctgagatcagaagtgcaagaccagcctggtcaatacagtgaaaccctgtctctactaaaaatacaaaacattagtcaggtgtggtgatgtgtgcctgtggtccaagctactcaggaggctgagggagaagaatcacttgaacccaggaggcggagattgtagtgagccgagatcgtgccactgcactctagccttggcgacagagcgagattccatcta----aaaaaaaaaaaaaaaaaaaaaaaatgaaacgcT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96701754 327 + 98384682 ATTTCTAggccaggtgcagtggctcacgcctgtaataccagcactttgagcggccgaggcaggcagattaccggagatcagaagtgcaagaccagcctggtcaatacagtgaaaccctgtctctactaaaaatacaaaacattagtcaggtgcggtgatgtgtgcctgtggtccaagctactcaggaggctgaggcagaagaatcacttgaacccaggaagcagaggttgtagtgagccgagatcgtgccactgcactctagccttggcgacagagcgagattccatctcaaaaaaaaaaaaaaagaagaaaaaaaaTTGAAAAGCT i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169908854 442 + 171630274 T e canFam3.chr1 56190531 0 + 122678785 C a score=419018.000000 s hg38.chr6_KB021644v2_alt 123913 162 + 185823 ATTTCTATACTTTGAATGCTCACTTTTTAATAATTCTGTGTTTGTTAGTATCCCAGAAGCTGATTCTATTTATGAAAAATGCACCTGATATCCTGAGAACACTGCCAAGTGTGCACTCTGGATTGGCCTCTGCACACACAATTGTCCAGTTGCTGAG---GGCTG s panTro4.chr6 170711701 161 + 172623881 ATTTCTA-ACTTTGAATGCTCCCTTTTTAATAATTCTGTGTTTGTCAGTATCCCAGAAGCTGATTCTATTTATGAAAAATGCACCTGATATCCTGAGAACACTGCAAAGTGTGCACTCTGGTTTGGCCTCTGCACACACAATCGTCCAGTTGCAGAG---GGCTG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172465708 158 + 174210431 ATTTCTATACTTTGAATGCTCACTTTTTAATAATTCTG----TGTCAGTATCCCAGAAGCTGATTCTATTTATGAAAAATGCACCTGATATCCTGAGAACACTGCAAAGTGTGCACTCTGGATTGGCCTCTGCGCACACAATCGTCCAGTTGCTGAG---GGCTG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156325522 162 + 157873769 ATTTCTATACTTTGAATGCTCACTTTTTAATAATTCTGTGTTTGTCAGTATCCCAGAAGCTGATTCTATTTATGAAAAATGCACCTGATATCCTGAGAACACTGCAAAGTGTGCACTCTGGACTGGCCTCTGCACACACAATTGTCCAGTTGCTGAG---GGCTG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168143006 160 + 169853907 ATTTCTATACTTTGAATGCTCACTTTTTAATAATTC--TGTTTGTCAGTATCCCAGAAGTTGATTCTATTTATGAAAAATGCACCTGACATCCTGAGAACACTGCAAAGTGTGCAATCTGGACTGGCCTCTGTGCACACAATTGTCCGGTTGCTGAG---GGCTG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169097460 160 - 170955103 ATTTCTATACTTTGAATGCTCACTTTTTAATAATTC--TGTTTGTCAGTATCCCAGAAGTTGATTCTATTTATGAAAAATGCACCTGACATCCTGAGAACACTGCAAAGTGTGCAATCTGGACTGGCCTCTGTGCACACAATTGTCCGGTTGCTGAG---GGCTG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163915974 162 + 165299245 ATTTCTATACTTTGAatgctcactttttaataattCTGTGTTTGTCAGTATCCCAGAAGTTGATTCTATTTATGAAAAATGCACCTGATATCCTGAGAACACTGCAAAGTGTGCAATCTGGACTGGCCTCTGTGCACACAATTGTCCAGTTGCTGAG---GGCTG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96702081 162 + 98384682 ATTTCTATACTTTGAATGCTCACTTTTTAATAATTCTGTGTTTGTCAGTATCCTAGAAGCTGATTCTATTTATGAAAAATGCACCTGACATCCTGAGAACACTGCAAAGTGTGCAATCTGGACTGGCCTCTGTGCACACAATCGTCCAGTTGCTGAG---GGCTG i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56190531 156 + 122678785 ATTTCTGTATTTTGAATATT---TTTGAAACAAATCTGTATGTTTTGGTAGCTCA------GATTCTGTATTAAAGGGAGGCCTCAGATATATTGAGAACATTGTGATAAATGGAATCTGAGTTGGACTTTGCACACGTGAATTTTAAGCTTCTGAGCATGGCTG i canFam3.chr1 C 0 I 1700 e calJac3.chr4 169908854 442 + 171630274 T a score=658290.000000 s hg38.chr6_KB021644v2_alt 124075 280 + 185823 CCCCGAGCTGAGCACTGCTTTGCGAATGTTGGATGAGCACTTACCTTAGGCTTAGCTGCACGAGAGCCCTGGAGCAGTGTGGGGTTTGTGAAAGAGCACAGGCTCCCCTGGTGCCCAGCGAAC-------CTGGTGGAGTGAGATGAGTTTCCCCTTATGACAAGGGAAATAAAGATGGGATGAAGCATCCACT---GGGACAGCCCAAGGGCCGGGGTCCTAAAGGCCAAGGGCATTCAGATGCTGACGCTGGAGGCCTCCTCAGTGAGGGAAGCCAGTGCCTGCCCTG s panTro4.chr6 170711862 280 + 172623881 CCCCGAGCTGAGCACTGCTTTGCGAATGTTCGATGAGCACTTACCTTAGGCTTAGCTGCACGAGAGCCCTGGAGCAGTGTGGGGTTTGTGAAAGAGCACAGGCTCCCCTGGTGCCCAGCGAAC-------CTGGTGGAGTGAGATGAGCTTCCCCTCATGACAAGGGAAATAAAGATGGGATGAAGCATCCACT---GGGACAGCCCAAGGGCCGGGGTCCTAAAGGCCAAGGGCATTCAGATGCTGACACTGGAGGCCTCCTCAGTGAGGGAAGCCAGTGCCTGCCCTG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172465866 280 + 174210431 CCCCGAGCTGAGCATTGCTTTGCGAATGTTGAATGAACACTTACCATATGCTTAGCTGCATGAGAGCCCTGAAGCAGTGTGGAGTTTGTGAAAGAGCACAGGCTCCTCTGGTGCCCAGCGAAC-------CTGGTGGAGTGAGATGAGTTTCCCCTCATGACAAGAGAAATAAAGATGGGATGAAGCATCCACT---GGGACAGCCCAATGGCCGGGGTCCTAAAGGCTGAGGGCATTCAGATGCTGACGCTGGAGGCCTCCTCAGTGAGGGAAGCCAGCGCCTGCCCTG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156325684 287 + 157873769 CCCCGAGCTGAGCATTGCTTTGCGAATGTTGAATGAGCACTTACCTTATGCTTAGCTGCACGAGAGCCCTGAAGCAGTGTGGGGTTTGTGAAAGAGCACAGGCTCCTCTGGTGCCCAGCGAACCTCCACGCTGGTGGAGAGGGACGAGTTCCCCCTCATGACAAGGGATATAAAGATGGGATGAAGCATCCACT---GGGACAGCCCAAGGGCCAGGGTCCTAAAGGCCGAGGGCATTCAGATGCTGACGCTGGAGGCCTCTTCAGTGAGCGAAGCCGGCGCCTGCCCTG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168143166 290 + 169853907 CCCCGAGCTGAGCATTGCTTTGCGAATGTTGAATGAGCAGTTACTCTATGCTTAGCTGCACAAGAGCCCTGAAGCAGTGTGGGGTTTGTGGAAGAACATGGGCTCCTCTGGTGCTCAGCGAGCCTCCACACTGGTGGAGAAAGACGAGTTTCCCCTGGTGACAAGGGAAATAAAGATGGGATGAAGCATCCGCCATGGGAACAGCCCCAGGGCTGGGGTCCTAAAGGCCGAGGGCATTCAGATGCTGACGCTGGAGGCCTCCTCAGTGAGGGAAGCCAGCGCCTGCACTG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169097620 290 - 170955103 CCCCGAGCTGAGCATTGCTTTGCGAATGTTGAATGAGCACTTACTCTATGCTTAGCTGCACAAGAGCCCTGAAGCAGTGTGGGGTTTGTGGAAGAACATGGGCTCCTCTGGTGCTCAGCGAGCCTCCACACTGGTGGAGAAAGACGAGTTTCCCCTGGTGACAAGGGAAATAAAGATGGGATGAAGCATCCGCCATGGGAACAGCCCCAGGGCTGGGGTCCTAAAGGCCGAGGGCATTCAGATGCTGACGCTGGAGGCCTCCTCAGTGAGGGAAGCCAGCGCCTGCACTG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163916136 290 + 165299245 CCCCGAGCTGAGCATTGCTTTGCGAATGTTGAGTGAGCACTTACTCTATGCTTAGCTGCACAAGAGTCCTGAAGCAATGTGGGGTTTGTGGAAGAGCATGGGCTCCTCTGGTGCTCAGCGAGCCTCCACACTGGTGGAGAAAGACGAGTTTCccctggtgacaaaggaaataaagatggGATGAAGCATCCGCCATGGGAACAGCCCCAGGGCCGGGGTCCTAAAGGCCGAGGGCATTCAGATGCTGACGCTGGAGGCCTCCTCAGTGAGGGAAGCCAGCGCCTGCACTG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96702243 290 + 98384682 CCCTGAGCTGAGCATTGCTTTGCGAATGTTGAATGAGCACTTACTCTATGCTTAGCTGCACAAGAGCCCTGAAGCAATGTGGGGTTTGTGGAAGAGCATGGGCTCCTCTGGTGCTCAGTGAGCCTCCACGCTGGTGAAGAAAGACGAGTTTCCCCTCGTGACAAGGGAAATAAAGATGGAATGAAGCATCCACCTCGGGAACAGCCCCAGGGCCAGGGTCCTAAAGGCCGAGGGCATTCAGATGCTGATGCTGGAGGCCTCCTCAGTGAGGGAAGCCAGCGCCTGCACTG i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169908854 442 + 171630274 T e canFam3.chr1 56190687 1700 + 122678785 I a score=1541188.000000 s hg38.chr6_KB021644v2_alt 124355 552 + 185823 GTGGGGAGGATGGGAGCACCTGGCCACACAGAGAAGAAGGGAAGAGGAC-GACTCGGCACGAAGCCGGCTTTGAAACTTGACTGGGAGGGAGTCCAGCAAGAAC------GGAGCCAGGCAGGTTTATTCACTGATTGTTCA---TCTTTTCATTCTCGGCTTGTGCAGGAGTCCAGAGCTATTTTAAACAGCACCGTTAGAACCGTCTCTGCAAACAACATCTACTGCTGTGCTGACCGTGGACAGGTCTCCGCCAAGCCGTGGCTCCTGTTGTCCTGACATAGACGCTGCCATTTTAACACAGACCTCAAGGGGCTGGTGGCTGGACCCACGCGGCCGTCACTGCCCCGACCCAGCAGAACCCCGTGGGCGTGGTTGCACAC--GTCTCCCACTAACGTTCAGCATCAAAAGTCGGGGGATCGACATTTATTGCAAAGTTCAAGACAGCTCACTGGTCT-GACCTCGAGGGTGTCCCTTAGGCCCGTCTCTCAGAGTGTGCATTGGCTGTAATGGAGAAAGTGAGTTTTCCTTGGATTCTGCCCTGGTTTGACCTCATCACAC s panTro4.chr6 170712142 552 + 172623881 GTGGGGAGGATGGGAGCACCTGGCCACACAGAGAAAAAGGGAAGAGGAC-GACTCGGCACGAAGCCGGCTTTGAAACTTGACTGGGAGGGAGTCCAGCAAGAAC------GGAGCCAGGTAGGTTTATTCACTGATTGTTCA---TCTTTTCATTCTCAGTTTGTGCAGGAGTCCAGAGCTATTTTAAACAGCACCGTTAGAACCGTCTCTGCAAACAACGTCTACTGGTGTGCTGACCGTGGACAGGTCTCCGCCAAGCCGTGGCTCCTGTTGTCCTGACATAGACGCTGCCATTTTAACACAGACCTCAAGGGGCTGGTGGCTGGACCTGAGCGGCCGTCACTGCCCCGACCCAGCAGAACCCCATGGGCGTGGTTGCACAC--GTCTCCCACTAACGTTCAGCATCAAAAGTCGGGGGATCGACGTTTATTGCAAAGTTCAAGACAGCTCACTGGTCT-GACCTCAAGGGTGTCCCTGAGGCCCGTCTCTCAGAGTGTGCATTGGCTGTAACGGAGGAAGTGAGTTTTCCTTGGATTCTGCCCTGGTTTGACCTCATCACAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172466146 552 + 174210431 CTGGGGAGGATGGGAGCACCTGGCCACACAGAGAAGAAGGGAAGATGAC-GACTCGGCACGAAGCCGGCTTTGAAACTTGACTGGGAGGGAGTCCAGCAAGAAT------GGAGCAAGGTAGGTTTATTCACTGATTGTTCA---TCCTTTTATTCTCGGCTTGTGCAGGAGTCCAGAGCTATTTTAAACAGCACCGTTAAAACCGTCTCTGCAAATACCGTCTACTGGTGTGCTGACCGTGGACAGGTCTCCGCCAAGCCATGGCTCCTGTCGTCCTGACATAGATGCTGCCATTTTAACACAGACCTCAAGGGGCTGGTGGCTGGACCTGTGCGGCGGTCACTGCCCCGACCCAGCAGAACCCCGTGGGCGTGGTTGCACAC--GTCTCCCACTAACGTTCAGCATCAAAAGTCGGGGGATCGACGTTTATTGCAAAGTTCAAGACAGCTCACTGGTCT-GACCTCGAGGGTGTCCCTGAGGCCCGTCTCTCCGAGTGTGCATTGGCTGTAATGGAGAAAGTGAGTTTTCCTTGGATTCTGCCCTGGTTTGACCTCATCACAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156325971 553 + 157873769 GTGGGGAGGATGGGAGCACCAGGCCACACAGAGGAGAAGGGAAGAGGGC-GACGCGGCACGGAGCCGGCTTTGAAACTTGATTGGGAGGGAGTCCAGCAAAAAC------GGAGCCAGGTAGGTTTATTCACTGATGGTTCA---TCCTTTTATTCTTGGCTTGTCCAGGAGTCCAGGGCTATTTTAAACAGCACCGTTAGAACCGTCTCTGCAAACACCGTCCGCTGGTGTGCTGACCGTGGACAGGTCTCCGCCAAGCCGTGGCTCCTGTCATCCTGACATAGACGCTGCCATTTTAACGCTGACCTCAAGGGGCTGGTGGCTGGACCTGCGCGGCCGTCACTGTCCCGACCCAGCAGAATCCCGTGGGTGTGGTTGCACAC--ATCTCCCACTAACGTTCAGCATCAAAAGTCGGGGGATTGATGTTTATTGCAAAATTCAAGACAGCTCACTGGTCTGGACCTCAAGGGTGTCCCTGAGGCCCGTCTCTCCGAGTGTGCATTGGCTGTAATGGAGAAAGTGAGTTTTCCTTGGATTCTACCCTGGTTTATGCTCATCACAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168143456 559 + 169853907 GTGGGGAGGATGGGAACACCTGGCCACAGAGAGAGGGAGGGAAGAGGAC-GACTCGGCACGAGGCTGGCTTTGAAACTTGATTGGGAGGGAGTCCAGCAAAAACAGGTAAGGAGCTAGGTAAGTTTATTCACTAATTGTTCA---TCCTTTTGTTCTTGGCTTGTCCAGGAGTCCAGAGCTATTTTAAACAGCATCGTCAGAACCATCTCTGCAAACACTGCCCGCTGGTGTGCTGGCCGTGGACAGGTCTCTGCCAAGCCGTGGCTCCTGTCGTCCTGACTTAGATGCTGCCGTTTTAACGCTGACCTCAAGGGGCTGGTGGCTGGACCTGCGTGGCCATCACTGCCCCGACCTAGCAGAACCCCGTGGGCGTGGCTTCACAC--GTCTCCCACTAACGTTCAGCATCGAAAGTCGGGGAATCCACATTTATTGCAAAGTTCAAGACAGCTCACTGGTCTGGACCTCGAGGGTGTCCCTGAGGCCCATCTCTCCGAGTGTGCATTGGTTGTAATGGAGGAAGTGAGTTTTCCTTGGATTCTGTCCTGATTTGACCTCATCATGC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169097910 559 - 170955103 GTGGGGAGGATGGGAACACCTGGCCACAGAGAGAGGAAGGGAAGAGGAC-GACTCGGCACCAGGCTGGCTTTGAAACTTGATTGGGAGGGAGTCCAGCAAAAACAGGTAAGGAGCTAGGTAAGTTTATTCACTAATTGTTCA---TCCTTTTGTTCTTGGCTTGTCCAGGAGTCCAGAGCTATTTTAAACAGCATCGTCAGAACCATCTCTGCAAACACCGCCTGCTGGTGTGCTGGCCGTGGACAGGTCTCTGCCAAGCCGTGGCTCCTGTCGTCCTGACTTAGATGCTGCCGTTTTAACGCTGACCTCAAGGGGCTGGTGGCTGGACCTGCGTGGCCATCACTGCCCCTACCTAGCAGAGCCCCGTGGGCGTGGCTTCACAC--GTCTCCCACTAACGTTCAGCATCGAAAGTTGGGGAATCCACGTTTGTTGCAAAGTTCAAGACAGCTCACTGGTCTGGACCTCGAGGGTGTCCCTGAGGCCCATCTCTCCGAGTGTGCATTGGTTGTAATGGAGGAAGTGAGTTTTCCTTGGATTCTGTCCTGATTTGACCTCATCATGC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163916426 559 + 165299245 GTGGGGAGGATGGGAACACCTGGCcacagagagaggcagggaagagGAC-GACTCGGCACGAAGCCGGCTTTGAAACTTGATTGGGAGGGAGTCCAGCAAAAGCAGGTAAGGAGCTGGGTGAGTTTATTCACTAATTGTTCA---TCCTTTTATTCTTGGCTTGTCCAGGAGTCCAGAGCTATTTTAAACAGCATCGTCTGAACCATCTCTGCAAACACCGCCTGCTGGTGTGCCGGCCGTGGACAGGTCTCTGCCAAGCCGTGGCTCCTGTCGTCCTGACTTAGACGCTGCCGTTTTAACGCTGACCTCAAGGCGCTGGCGGCTGGACCTGCGTGGCCGTCACTGCCCCGACTTTGCAGAACCCCGTGGGCGTGGCTGCACAC--GTCTCCCACTAACGTTCAGCATCGAAAGTCGGGGAATCCACGTTTGTTGCAAAGTTCAAGACAGCTCACTGGTCTGGACCTCGAGGGTGTCCCTGAGGCCCATCTCTCCGAGTGTGCATTGGTTGTAATGGAGGAAGTGAGTTTTCCTTGGATTCTGTCCTGGTTTGACCTCATCATGC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96702533 559 + 98384682 GTGGGGAGGATGGGAACACCTGGCCACAGAGAGAGGAAGGGAAGAGGAC-GACTCGGCATGAAGCTGGCTTTGAAACTTGATTGGGAGGGAGTCCAGCAAAAACAGGTAAGGAGCTAGGTAAGTTTATTCACTAATTGTTCA---TCCTTTTATTCTTGGCTTGTCCAGGAGTCCAGAGCTATTTTAAACAGCATCGTCAGAACCATCTCTGCAAACACCGCCTGCTGGTGTGCTGGCCGTGGACAGGTCTCTGCCAAGCCGTGGCTCCTGTCGTCCTGACTTAGATGCTGCTGTTTTAACGCTGACCTCAAGGGGCTGGTGGCTGGACCTGCGTGGCCGTCACTGCCCTGACCCAGCAGAACCCTGTGGACGTGGCTTCACAC--GTCTCCCACTAACGTTCAGCATCGAAAGTCGGGGCATCCACGTTTGTTGCAAAGTTCAAGACCTCTCACTGGTCTGGACCTCAAGGGTGTCCCTGAGGCCCATCTCTCCGAGAGTGCATTGGTTGTAATGGAGGAAGTGAGTTTTCCTTGGATTCTGTCCTGGTTTGACCTCATCATGC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169908412 547 + 171630274 GTGGGGCGGATGGGGGCGTCTGGCCAGGCGGGGAGGAAGGGAAGAGGACTGACTCCGTGTGAAGCCGGATTTGGGAGCTTACTATAAGGGAGTCCAGCAAAACC------CTAGCCAGGCACTTTTATTCACTGATTGATTGTTCTCCTTGTATTCT-GGCTTGTCCAGGAGTCTAGAGCTCCTTTCAACTGCATCGTTAGAATCATCTCTGCAGGCACT-TCGGCTGGTGTGCTGACCGTGG-CAGGTCTCTGCCAGGCCTCGGCTCCTGTCAGCCTGACGTGGATGCTGCCATGTTCACGCTGACCTCAGGGGGCTGGCGGCTGGACCTGCATGGCCGTCCCTGTCCCGATACAGCAGAGCCCCGTGGACGTGGCTGCACACGTGTCTGCCACTAACCTTCAACATCTAAAGTCGGAGAGTTGACATTTAT--CAGAGTGGAAGACAGC-------TCTGGACCTTGGTGGTGTCCCTGAGACCTGCCTCTCTGAGTGCATGTGGATTGTTATGGAGAAAGTGAGTTTTCCTTGGATTCTGTCCTGGTCTGACCTCCTCGCAC i calJac3.chr4 T 442 C 0 e canFam3.chr1 56190687 1700 + 122678785 I a score=2469462.000000 s hg38.chr6_KB021644v2_alt 124907 876 + 185823 TCCAGGACACAGAGAGCCCGGCTGGGTGATCAGAGATCGGTGTCCTCGGGGAGCCTGCAGT---GCCCCTGCTG---------AGGGCTTCAGGGGCTC-AGGAGGTGAAGTGGCTGACTCTAGGTAAAATGGGCTCCGGG---AGAGGCACCTTTGTTTTAGGGTGGTTTTAGGATCATTAGGTGAAT-----GCAGCGACCT------CACCCA------------ACTACGGCCTCAGGGC------------CTGGCTCCCCTCAGCCCCCCGGGGCTTTGATGGTGGCCTTGGGACCTGTCCCAGAAGTTGCTGGCTGAGTACAACAGACCTTTGCTGACCAAAGGAAGCAAGGAAAAGAGTTTAGCTGCTCAGGACAATGACTGCATTTAATGACCTCTCCTGCTAGAAAC-AAAAAAACAGTGGCTCAGGCCTGGGGATGAGAATCAAGTTTTACAGATGGTGGC-------AGGAGTTCATTACACTGAGCACAGCCA---GCCAGCGTCCTGCAGCTGCAAGTGCTCCAGGAAAGGCACCTCCACTTCTGGTCTCATCTCGAGGT-CGGTCTCAGTCAGCTGGGAGTGAAAGGGAC-ACATTTACAAGTATTCTCT-GGAGACAGTGCAAGGTGCTTCCTGCTGCCATCCAGGACAAGAGGCTCCTGTGCTGGGTGCCTGATACTCTGGCTGGGATGCTTGCATCCTCTCCTTTGCTTCTGCCTGGATCCCTCCCTCCCAAACTTGGTGTCAGAAGAGA-AGAGGGACCTCTGGGGACGCAAA---CATCATTACCAAAACTTTAAGGCCACTTTTCAACAAAAAGGGCATCTTTGAAAGACTTTCAGATCAGAAACAACGCTGTCTCTACCCTCCCACCCCTCCAACCTCAGATTTGGGTGCAC-TACCATGCAGAATATATCAAATCAGACTTTT s panTro4.chr6 170712694 880 + 172623881 TCCAGGACACAAAGAGCCCGGCTGGGCGATCAGAAATCGGTGTCCTCGGGGAGCCTGCAGT---GCCCCTGCTG---------AGGGCTTCAGGGGCTC-AGGAGGTGAAGTGGCTGACTCTAGGGAAAATGGGCTCCGGG---AGAGGCACCTTTGTTTTAGGGTGGTTTTAGGATCATTAGGTGAAT-----GCAGCGACCT------CACCCA------------ACTACGGCCTCAGGGC------------CTGGCTCCCCTCAGCCCCCCGGGGCTTTGATGGTGGCCTTGGGACCTGTCCCAGAAGTTGCTGGCTGAGTACAACAGACCTTTGCTGACCAAAGGAAGCAAGGAAAAGAGTTTAGCTGCTCAGGACAATGACTGCATTTAATGACCTCTCCTGCTAGAAACAAAAAAAACAGTGGCTCAGGCCTGGGGATGAGAATCAAGTTTTATAGATGGTGGC-------GGGAGTTCATTACACTGAGCACAGCCA---GCCAGCGTCCTGCAGCTGCAAGTGATCTGGGAAAGGCACCTCCACTTCTGGTCTCATCTCGAGGT-CGGTCTCAGTCAGCTGGGAGCGAAAGGGAC-ACATTTACAAGTGTTCTCT-GGAGACAGTGCAAGGTGCTTCCTGCTGCCATCCAGGACAAGGGGCTCCTGTGCTGGGTGCCTGATACTCCTGCTGGGATGCTTGCATCCTCTTCTTTGCTTCTGCCTGGATCCCTCCCTCACAAACTTTGTGTCAGAAGAGA-AGAGGGACCTCTGGGGACGCAAACATCATCATTACCAAAACTTTAAGGCCACTTTTCAACAAAAAGGGCATCTTTGAAAGACTTTCAGATCAGAAACAACGCTGTCTCAACCCTCCCACCCCTCCAACCCCAGATTTGGGTGCAC-TACCATGCAGAATATATCAAATCAGACTTTT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172466698 878 + 174210431 TCCAGGACACAGAGAGCCCGGCTGGGCGATCAGAGATCGGTGTCCTCGGGGAGCCTGCAGT---GACCCTGCTG---------AGGGCTTCAGGGGCTC-AGGAGGTGAAGTGGCTGACTCTACGGAAAATGGGCTCCGGG---AGAGGCACCTTTGTTTTAGGGTGGTTTTAGGATCATTAGGTGAAT-----GCAGCGACCT------CACCCA------------ACTACGGCCTCAGGGT------------CTGGCTCCCCTCAGCCCCCCAGGGCTTTTATGGTGGCCTTGGGACCTGTCCCAGAAGTTGCTGGCTGAGTACAACAGAACTTTGCTGACCAAAGGAAGCAAGGAAAAGAGTTTAGCTGCTCAGGACAATGACTGCATTTAATGACCTCTCCTGCTAGAAAC--AAAAAACAGTGGCTCAGGCCTGGGGATGAGAATCAAGTTTTACAGATGATGGC-------AGGAGTTCATTACACTGAGCACAGCCG---GCCAGCGTCCTGCAGCTGCAAGTGATCTGGGAAAGGCACCTCCACCTCTGGTCTCATCTTGAGGT-CGGTCTCAGTCAGCTGGGAGTGAAAGGGAC-ACATTTACAAGTGTTCTCT-GGAGATAGTGCAAGGTGCTTCCTGCTGCCATCCAGGACAAGGGGCTCCTGCGCTGGGTGCCTGATACTCCCGCTGGGATGCTTGTGTCCTCTCCTTTGCTTCTGCCTGGATCCCTCCCCCACAAACTTTGTGTCAGAAGAGA-AGAGGGACCTCTGGGGACACAAACATCATCATTACCAAAACTTTAAGGCCACTTTTCAACAAAAAGGGCATCTTTTAAAGACTTTCAGGTCAGAAACAACACTGTCTCAACCCTCCCATCCCTCCAACCCCAGATTTGGGTGCAC-TACCATGCAGAATATATCAAATCAGACTTTT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156326524 879 + 157873769 TCCAGGACACAGAGAGCCCGGCTGGGCGATCAGAGATCGGTGTCCTCGGGAAGCCTGCAGT---GCCCCTGCTG---------AGGGCTTCAGGGGCTC-AGGAGGTGAAGTGGCTGACTCTGGGGAAAATGGGCTCCGGG---AGAGGCACCTTTGTTTTAGGGTGGTTTCAGGATTGTTAGGTGAAT-----GTAGTGACCT------CACCCA------------ACTACGGCCTCAGGGC------------CTGGCTCCCCTCAGCCCCGTGGGGCTTTGATGGTGGCCTTGGGACCTGTTCCAGAAGTTGCTGGCTGAGTACAACAGATCTTTGCTGACCGAAGGAAGCAAGGAAAAGAGTTTGGCTGCTCAGGACAATAACTGCATTTAATGACCTCTCCTGCTAGAAAC--AAAAAGCAGTGGCTCAGGCCTGGGGATGAGAATCAAGTTTTATAGATGGTGGTGG----GAGGAGTTCATTACACTGAGCACAGCCG---GCCAGCGTCCTGCAGCTGCAAGTGATCTGGGAAAGGCAGCTCCACCTCTGTTCTCATCTCCAGGT-GAGTCTCAGTCAGCTGGGAGCAAAAGGGAC-ACATTTACAAGTGTTCTCT-GGAGACAGTGCAAGGTGCTTCCTGCTGCCATCCAGGACAAGGGGCTCCTGCGCTGGGTGCCTGATACTCCCGCTGGGATGCTTGTGTCCTCTCCTTTGCTTCTGCCTGGATCCCTCCCCCACAAACTTTGTGTCAGAAGAGA-AGACCGACCTCTGGGGACACAAACATCATCATTGCCAAAACTTTAAGGCCACTTTTCAACAAAAAGGGCATCTTTTAAAGACTTTCAGATCAGAA--AACACTGTCTCAACCCTCCCATCCCTCCAACCCCAGATTTGTGTGTAC-TACCATGCAGAAGATATCAAATCAGACTTTC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168144015 881 + 169853907 TCCAGGACGCGGACAGCCCGGCTGGGCGATCAGAGATTGATGTCCTCGGGGAGCCTGCGAT---GCTCCTGCTG---------AGAGCTTCAAGGGCTC-AGGAGGTGAAATGGCTGACTCTGGGGAAAATGGGCTCCTGG---AGAGGCACCTTTGTTTCAGGGTGGTTTTAGGACTGTTTGGTGAAT-----GCAGCAACCT------CACCCA------------ACTACGGCCTCAGGGC------------CTGGCTCCCCTCAGCCCCGCGGGGCTTTGATGTGGACCTGGGGACCTGTCCCAGAAGTTGCTGGCTGAGTACAACAGACTTTTGCTGACTGAAGGAAGCAAGGAAAAGAGTTTGGCTGCTCAGGACAATGACTGCATTTAATGACCTCTCCTGCTAGAAAC--AAAAACCAGTGGCTCAGGCCTGGGGATGAGAATCAAGTTTCACAGATGGTGGCGG----GAGGAGTTCATTACACCAAGCACAGCCG---GCCAGCGTCCTGCAGCTGCACATGATCCACGAAAGGCACCTCCACCTCTGGTCTCATCTCAAGGT-CTGTCTCCGTCAGCTGGGAGCGAAAGGGACAACATTTACAAGCGTTCTCT-GGAGACAGTGCAAGGTGCGTCCTGGAGCCGTCCGGGACAAG-GGCTCCTGCGCCGGGTGCCTGATACTCCCAGTGCGACACTTGCATCCACTCCTTTGCTTCTGCCTGGATCTCTCCCCGACAAACTTTGTGTCAGAAGAGA-AGAGGGACCTCTGGGGACATAAACGTCATCGTTACCAAAACTTTAAGGCCACTTTTCAACAAAAAGGACATCTTTTAAAGACTTTCAGATCAGAAACAACGCTGTCTCAACCCTCCCATTCCTCCAACCCCAGATCTGTGTGCAC-TGCCATGCAGAATATATCAAATCGGACTTTT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169098469 881 - 170955103 TCCAGGACGCGGACAGCCCGGCTGGGCGATCAGAGATTGATGTCCTCGGGGAGCCTGCGAT---GCTCCTGCTG---------AGAGCTTCAAGGGCTC-AGGAGGTGAAATGGCTGACTCTGGGGAAAATGGGCTCCTGG---AGAGGCACCTTTGTTTCAGGGTGGTTTTAGGACTGTTTGGTGAAT-----GCAGCAACCT------CACCCA------------ACTACGGCCTCAGGGC------------CTGGCTCCCCTCAGCCCCGCGGGGCTTTGATGGTGACCTGGGGACCTGTCCCAGAAGTTGCTGGCTGAGTACAACAGACTTTTGCTGACTGAAGGAAGCAAGGAAAAGAGTTTGGCTGCTCAGGACAATGACTGCATTTAATGACCTCTCCTGCTAGAAAC--AAAAACCAGTGGCTCAGGCCTGGGGATGAGAATCAAGTTTCACAGATGGTGGCGG----GAGGAGTTCATTACCCCAAGCACAGCCG---GCCAGCGTCCTGCAGCTGCACACCATCCACGAAAGGCACCTCCACCTCTGGTCTCATCTCAAGGT-CTGTCTCCGTCAGCTGGGAGCGAAAGGGACAACATTTACAAGCGTTCTCT-GGAGACAGTGCAAGGTGCGTCCTGGTGCCGTCCGGGACAAG-GGCTCCTGCGCCGGGTGCCTGATACTCCCAGTGCGACACTTGCATCCACTCCTTTGCTTCTGCCTGGATCTCTCCCCGACAAACTTTGTGTCAGAAGAGA-AGAGGGACCTCTGGGGACATAAACATCATCGTTACCAAAACTTTAAGGCCACTTTTCAACAAAAAGGACATCTTTTAAAGACTTTCAGATCAGAAACAACGCTGTCTCAACCCTCCCATTCCTCCAACCCCAGATCTGTGTGCAC-TGCCATGCAGAATATATCAAATCGGACTTTT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163916985 881 + 165299245 TCCAGGACACCGAGAGCCCGGCTGGGCGATCAGAGATGGGTGTCCTCGGGGAGCCTGCGGT---GCTCCTGCTG---------AGGGCTTCAGGGGCTC-AGGAGGTGAAGTGGCTGACTCTGGGGAAAATGGGCTCCTGG---AGAGGCACCTTGGTTTCCGGGTGGTTTTAGGACTGTTTGGTGAAT-----GCAGCGACCT------CACCCA------------ACTACGGCCTCAGGGC------------CTGGCTCCCCTCAGCCCCGCGGGGCTTTGATGGTGGCCTGGAGACCCGTCCCAGAAGTTGCTGGCTGAGTACAACAGACTTTTGCTGACtgaaggaagcaaggaaaagaGTTTGGCTGCTCAGGACAATGACTGCATTTAATGACCTCTCCTGCTAGACAC--AAAAaccagtggctcaggcctggggATGAGAAGCAAGTTTCACCGATGGTGGCGG----GAGGAGCTCATTACACCAAGCACAGCCG---GCCAGCGTCCTGCAGCTGCACACGATCCATGAAAGGCACCTCCACCTCCGGTCTCATCTCAAGGT-CTGTCTCCGTCAGCTGGGAGCGAAAGGGACAACATTTACAAGCGTTCTCT-GGAGACAGTGCAAGATGCGTCCTGGTGCCGTCCAGGACAAG-GGCTTCTGCGCCGGGTGCCTGATACTCCCGGTGCGACACTTGCATCCGCTCCTTTGCTTCTGCCTGGATCTCTCCCCCACAGACTTTGTGTCAGAAGAGA-AGAGGGACCTCTGGGGACATAAACATCATCGTTACCAAAACTTTAAGGCCACTTTTCAACAAAAAGGGCATCTTTTAAAGACTTTCAGATCAGAAACAACGCTGTCTCAACCCTCCCATTCCTCCCACCCCAGATCTGTGTGCAC-TGCCATGCAGAATATATCAAATCGGACTTTT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96703092 872 + 98384682 TCCAGGACACGGAGAGCCCGGCTGGGCGATCAGAGATGGGTGTCCTTGG-----CTGCGGT---GCTCCTGCTG---------AGGGCTTCAGGGGCTC-AGGAGGTGAAGTGGCTGACTCTGGGGAAAACGGGCTCCTGG---AGAGGCACCTTTGTTTCAGGGTGATTTTAGGACTGTTTGGTGAAT-----GCAGCGACCT------CACCCA------------ACTACAGCCTCAGGGC------------CTGGCTCCCTTCAGCCCCGCAGGGCTTTGATGGTGGCCTGGGGACCTGTCCCAGAAGTTGCTGGCTCAGTACAACAGACTTTTGCTGACTGAAGGAAGCAAGGAAAAGAGTTTGGCTGCTCAGGACAATGACTGCATTTAATGACCTCTCCTGCTAGAAAC--AAAAACCAGTGGCTCAGGCCTGGGGATGAGAATCAAGTTTCACAGATGGTGGCGG----GAGGAGTTCATTACACCAAGCCCAGCCG---GCCAGCGTCCTGCAGCTGCACACGATCCACGAAAGGCACCTCCACCTCTGGTCTCATCTCAAGGT-CTGTCTCAGTCAGCTGGGAGCGAAAGGGACAACATTTCCAAGCGTTCTCT-GCAGACAGTGCAAGGTGCTTCCTGGTGCCGTCCAGGACAAG-GGCTCCTGCGCCGGGTGCCTGATACTTCCGGTGGGATGCTTGCATCCACTCCTTTGCTTCTGCCTGGATCTCTCCCCGACAAACTTTGTGTCAGAAGAGA-AGAGGGACCTCTGGGGACATAAACATCATCGTTACCAA----TTAAGGCCACTTTTCAACAAAAAGGGCATCTTTTAAAGACTTTCAGATCAGAAACAACGCTGTCTCAACCCTCCCATTCCTCCAACCCAAGATCTGTGTGCAC-TGCCATGCAGAATATATCAAATCGGAATTTT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169908959 806 + 171630274 TCTGGGACAGGGAGAGCCCAGGC-AGCGATCAGAGATGGGCGTGCT-GGGGAGCCCTCATT---GCCCCTGCCG---------AGCATGTCAGGGGCTC-GGGAGGGGAAGCGGCAGACTCTGGGGAAAATGGACTCTGGG---AGAGGCACCCGCGTTTGAAGGTGGTTTTAGGATTTTTGGGTGAAT-----GCAGCGACCT------CACCCA------------ACTACGGCCTCAGGGC------------CTCGCTCCCCACAGTGTTGAGAAGCTTTGACGGTGGCCTGGGGACCCGTCCCAGGAGTTGCTGACCGAGTACAACAGACTTTTGCTGACTGAAGACAGCAAGGAAAAGAGTTTGGCTGCTCAGGACACTGACTGCATTTAATGATCTCTCATTAGGGAAAT--GAATGACGGTGGCTCAGGCTTGCAAATGAGAATCAAGCTTCACAGACTGTGGC------GGGGAGATCGTCAAACC--GCACAGCTG-------GCGTCCCACAGCGGCAAGTGATTCCGGAAAAGCCCCTCCGCC-CTGGTCCCATCTCAGGGTCCTGTCTCAGTCGGCC-GGAGTGAAAGGGACGACATTCACAGGCGTCCTCG-GGAGACAGTGC-AGGTGTTTCCCGGCGCCGCCCAGGACAGG-GGCTCCCG---GGGGTGCC----------------------GTGTCCACACCTTTGCTTCTGCCGGGACCCCTCCCC-ACAAACTTTCTGTCAGAAGAGA-AGAGGGACCTCTGGGGACATAAATATCGTCATTACCAAAACTTTAAGGCCACTCTTCAAC---AAGGACATCTTTTAAAGACTTTCAGATCA----------------------------------AGCCCGGATTTGTGGGCAC-CGCCATGCACGATAGGTCGAATCGGACCTTT i calJac3.chr4 C 0 C 0 s canFam3.chr1 56192387 792 + 122678785 TCCTGTGCGCAGGGCCCCCAG---GCTGAGCAGATTTCCGTGGGCCTGGGGGATGTCCACTCGAGTCCCTGTGGGCTCAGAGCAGGTCTGCGGAGGCTCTAGGAGGTAGAACGTTCTGGTTCAGAGAAAATGGGGCCTGGGGACAAAGACCCCGCTGGGGAGGAGGAATTCTCGGCTTGTTGGTGGAATCCCGGGCCGTGGCCTGGACCACACCCACCCCTTTCCTCCACTCCTGCTTCATGGCACTGGCGGGAGTCTGTCTTCCTCAAG---TAAGGGTGCATCAAGGTGGCATCTGCACTAGTTCGTGCA-----------AGGACA--AGACCTTTTCT-ACCCAAGGAAGCAAAGAACATGGTTTTGCCTCTTTGAGGAACCAGTGCATTTAATGACTCCTCCTGCTAGAAAC--AAAGG--ATTGGCTCTGGCCTTGAGATTAAGACCAAATTTTACTGATGGTGACAGGCCAGGGGTATCGGGTATAATGTG-ACAGCCAACAACCAGTGTTGCTCAGGTGTCCTCGCT-----GAAGGC--CGAGGCCCATGGCCTGGACCC------CGGTCT-GGGCAGCAGGGAGC-------------------AGCCTCCTTTGGGACACGCTGC----------------CCACACGGGCCAGA------CTG-----------------------------------GTCCCCTGCTCTGC----GCCTGG-------------------TGACCCAGGAGGGACAGAAGGACCTT--GGAAAAGTAACGTCGTCATTACTAAGACTCGAAGATCACTTTGCTAGATAAAGGACACTTTTACAAGAATGTCAGATCAGAAATGACATTGTC---ATCTTCCTG-----------CCAAATTGGTGCACACTTGCTCCAGAGAATACATGAAACCTGGGCTTC i canFam3.chr1 I 1700 C 0 a score=1256401.000000 s hg38.chr6_KB021644v2_alt 125783 479 + 185823 GCTATGATAATCTGACTTTTATCAAAGAGCACTGAGAGGGGACAGCCTGGCTGAAGACCACCCCAACAGCTGG--------ttttttttttttttttttcaatttttgagacaagatctcactctgtcacccaggctggagtgcagtgatgccatcacagctcactgcagcctcaaactcct-gggctaaagcaatcctcccacctcagcctcctgagtggctggaac------------------------------cacgtgcctgcatgtgcctgcacc-acgcctggcttag--------------ttgtttttt---------tttttttttttttgtaga------gatggggtcttgccatgttgcctaggctggtcttaaactcctgggctcaagcaatc---cttcctcggcctcccacagtgctgggattttaggcatgagcccccgcacAGCTCTGTGGGAATGCAAGGCCTTATCCCAGGAACACATGCTGCT-GGGGGGATAACCAGGAACATTGGCCCCAGTTTTCCACCTGGATCTG s panTro4.chr6 170713574 471 + 172623881 ACTATGATAATCTGACTTTTATCAAAGAGCACTGAGAGGGGACAGCCTGGCTGAAGACCACCCCAACAGCTGG--------tttgtttttttttt-----aatttttgagacaagatctcactctgtcacccaggctggagtgcagtgatgccatcacagctcactgcagcctcaaactcct-gggctaaagcaatcctcccacctcagcctcctgagtggctggaac------------------------------cacgtgcctgcatgtgcctgcacc-acgcctggctaa-----------------gtttttt---------tttttttttttttgtaga------gttggggtcttgccatgttgcctaggctggtcttaaactcctgggctcaagcaatc---cttcctcggcctcccacagtgctgggattttaggcatgagcccccgcacAGCTCTGTGGGAATGCAAGGCCTTATCCCAGGAACACATGCTGCT-GGGGGGATAACCAGGAACATTGGCCCCGGTTTTCCACCTGGATCTG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172467576 505 + 174210431 ACTACAATAATCTGACTTTTATCAAAGAGCACGGAGAGGGTACAGCCTGGCTGAAGACCACCCCAACAGCTGA--------ttttttttttttc------aattttcgagacaagatctcactctgtcacccaggctggagtgcagtgatgccatcaaaactcactgcagcctcaaactcct-gggctaaaccaatcctcccacctcagcctcctgagtggctggaaccatgtgcctgcatgtgcctgcatgtgcctgcatgtgcctgcatgtgcctgcaCC-ACGCCTGGCTAAG------------TTttgtttttttg-------tttttttttttctgtaga------gatagggtcttgccatgttgcctaggctggtcttagactcctgggctcaagcaatc---cttcttcggcctcccaaagtgctgagattctaggcatgagcgcccgcacAGCTC--TGGGAATGCAAGGCCTCATCCCAGGAACACGTGCTGCC-GAGGGGATAGCCAGGAACATTGGCCCCGGTTTTCCACCTGGATCTG i ponAbe2.chr6 C 0 I 167 s nomLeu3.chr3 156327403 488 + 157873769 CCTACAATAATCTGCCTTTTATCAAAGAGCACTGAGAGGGGACAGCCTGGCTGAAGACCACCCCAACAGCTGA--------tttttttttttc-------aattttggagacaagatctcactctgtcacccaggctggagtgcagtgatgccatcacagctcactgcagcctcaaactcctggggctaaagcaatcttcccacctcagcctcctgagtggctggaac------------------------------cacctgcctgcatgtgcctgcacc-acacctgggtaagttttttttttttttttttttttt---------tttttttttttttgtaga------gatggggtcttgccatgttgcctaggctggacttaaactcctgggctcaagcaatc---cttcctcagcctcccaaagtgctgggattctaggcacgagcccccgcacAGCTCTGTGGGAATGCAAGGCCTCATCCCAGGAACACATGCTGCCGGGGGGGATAGCCAGGAACATTGGCCCCGGTTTTCCACCTGGATCTG i nomLeu3.chr3 C 0 I 88 s rheMac3.chr4 168144896 481 + 169853907 ACTATGATAATCTGACTTTTATCAAAGAGCACTGAGAGGGGACAGCCTGACTGAAGACCA-CCCAACAGTTGA--------ttttttttttta-------agtttttgagacagggtctcactctgtcacccaggctggagtgccatgacgccatcacggctcactgcagcctcagactcct-gggctaaagcgatcctcccacctcagcctcctgagtggctggaac------------------------------catgtgcctgcatgtgcccgcacc-acacctggcttaa----------------gtttttttgttgttgttgtttttgtttttgtagagatggggatggggtcctgccatgtcgcctcggctagtcttaaactcctgggctcaagcgatc---cttcctcagcctcccaaagtgctgggattctaggcatgagcccccacgcAGCTCTGTGGGAAGTCAAGGCCTCATCCCAGGAACACATGCC----GGGGGGATAACCAGGGACACTGGCCCTGGTTTTCCACCTGGATCTG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169099350 481 - 170955103 ACTATGATAATCTGACTTTTATCAAAGAGCACTGAGAGGGGACAGCCTGACTGAAGACCA-CCCAACAGTTGA--------ttttctttttta-------agtttttgagacagggtctcactctgtcacccaggctggagtgccatgatgccatcacggctcactgcagcctcagactcct-gggctaaagcgatcctcccacctcagcctcctgagtggctggaac------------------------------catgtgcctgcatgtgcccgcacc-acacctggcttaa----------------gtttttttgttgttgttgtttttgtttttgtagagatggggatggggtcctgccatgttgcctaggctagtcttaaactcctgggctcaagcaatc---cttcctcagcctcccaaagtgctgggattctaggcatgagcccccacgcAGCTCTGTGGGAAGTCAAGGCCTCATCCCAGGAACACATGCC----GGGGGGATAACCAGGGACACTGGCCCTGGTTTTCCACCTGGATCTG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163917866 489 + 165299245 ACTATGATAATCTGACTTTTATCAAAGAGCACTGAGAGGGGACAGCCTGACTGAAGACCA-CCcaacagttgattttttttttttttttttta-------agtttttgagacagggtctcgctctgtcacccaggctggagtgcaatgatgccatcacggctcactgcagcctcagactcct-gggctaaagcgatcctcccacctcagcctcctgagtggctggaac------------------------------caTGTGCCTGCATGTGCCCGCACC-ACATCTGgcttaa----------------gtttttttgttgttgttgtttttgtttttgtagagatggggatggGGTCCTGCCATGTTGCCtcggctagtcttaaactcctgggctcaagcaatc---cttcctcagcctcccaaagtgctgggattctaggcatgagcccccacgcaGCTCTGTGGGAATTCAAGGCCTCATCCCAGGAACACATGCC----GGGGGGATAACCAGGGACACTGGCCCTGGTTTTCCACCTGGATCTG i papAnu2.chr4 C 0 I 87 s chlSab2.chr13 96703964 478 + 98384682 ACTATGATAATCTGACTTTTATCAAAGAGCACTGAGAGGGGACAGCCTGGCTGAAGACCA-CCCAACAGCTGA-tttttttttttttttttta-------agtttttgaga----------ctctgtcacccaggctggagtgcaatgatgccatcacggctcactgcagcctcagactcct-gggctaaagcgatcctcccacctcagcctcctgagtggctggaac------------------------------catgtgcctgcatgtgcccgcacc-acacctggcttaa----------------gtttttttgttgttgttgtttttgtttttatagagatggggatggggtcctgccatgttgcctaggctagtcttaaactcctgggctcaagcaatc---cttcctcagcctcccaaagtgctgggattctaggcatgagcccccacgcAGCTCTGTGGGAAGTCAAGGCCTCATCCCAGGAACACATGCC----GGGGGGATAACCAGGGACACTGGCCCCGGTTTTCCACCTGGATCTG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169909765 465 + 171630274 ACGATGATATTCTGACTTGTGTCGAGTAGAACT--GGGGGTCCAGGCTGGCCAAAGACCACCCCAACAGCTGt--------ttgtttgttttt-------agtttttgagacaaggtgtcactctgtcacccaggctggggcggagtgacgccatcaccgctcactgcagcctcaaagtcct-gggctagagccatcctcccagctcagcctcctcagtggctggagc------------------------------catatgcatgca-----ccacacctacaccagactaag----------------atttgtt---------tgtttat-ttttggtaga------gatggggctttgctgtgttgccgaggctggtcttaaactcctgggctcacgcaatccttcttcctcagcctcccaaagtgctgggattacgggcatgagc-cCCATGCAACTCTGTAGAATTGCAAGGCCTCATCCCAGGAGCATGTGCTGCT-GGGACGATAACCGGGGACACTGGCCACAGTTTTCCACCTGGATCTG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C a score=8185.000000 s hg38.chr6_KB021644v2_alt 126262 7 + 185823 GGAAAGA s panTro4.chr6 170714045 7 + 172623881 GGAAAGA i panTro4.chr6 C 0 C 0 s rheMac3.chr4 168145377 7 + 169853907 GGAAGGA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169099831 7 - 170955103 GGAAGGA i macFas5.chr4 C 0 C 0 s chlSab2.chr13 96704442 7 + 98384682 GGAAAGA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169910230 7 + 171630274 GGAATGA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C e papAnu2.chr4 163918355 87 + 165299245 I e nomLeu3.chr3 156327891 88 + 157873769 I e ponAbe2.chr6 172468081 167 + 174210431 I a score=64903.000000 s hg38.chr6_KB021644v2_alt 126269 22 + 185823 GACATCACACAGCTCAGTGTCC s panTro4.chr6 170714052 22 + 172623881 GACATCACACAGCTCAGCGTCC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468248 22 + 174210431 GACATCACACAGCTCAGCTTTC i ponAbe2.chr6 I 167 C 0 s nomLeu3.chr3 156327979 22 + 157873769 GGCATCACACAGCTCAACGTCC i nomLeu3.chr3 I 88 C 0 s rheMac3.chr4 168145384 22 + 169853907 GACATCACACAGCTCAGCGTCC i rheMac3.chr4 C 0 T 48 s macFas5.chr4 169099838 22 - 170955103 GACATCACACAGCTCAGCGTCC i macFas5.chr4 C 0 T 75 s papAnu2.chr4 163918442 22 + 165299245 GACATCACACAGCTCAGCTTCT i papAnu2.chr4 I 87 C 0 s chlSab2.chr13 96704449 22 + 98384682 GACATCACACAGCTCAGCGTCC i chlSab2.chr13 C 0 T 48 s calJac3.chr4 169910237 22 + 171630274 GACACCACACAGCTTAGCCTCC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C a score=5730.000000 s hg38.chr6_KB021644v2_alt 126291 4 + 185823 AGGA s panTro4.chr6 170714074 4 + 172623881 AGGA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468270 4 + 174210431 AGGA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156328001 4 + 157873769 AGGA i nomLeu3.chr3 C 0 C 0 s papAnu2.chr4 163918464 4 + 165299245 AGGA i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169910259 4 + 171630274 AGGA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C e chlSab2.chr13 96704471 48 + 98384682 T e rheMac3.chr4 168145406 48 + 169853907 T e macFas5.chr4 169099860 75 - 170955103 T a score=2051.000000 s hg38.chr6_KB021644v2_alt 126295 2 + 185823 GT s panTro4.chr6 170714078 2 + 172623881 GT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468274 2 + 174210431 GG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156328005 2 + 157873769 GG i nomLeu3.chr3 C 0 T 160 s macFas5.chr4 169099785 2 - 170955103 GG i macFas5.chr4 T 75 C 0 s papAnu2.chr4 163918468 2 + 165299245 GG i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169910263 2 + 171630274 GG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C e chlSab2.chr13 96704471 48 + 98384682 T e rheMac3.chr4 168145406 48 + 169853907 T a score=27390.000000 s hg38.chr6_KB021644v2_alt 126297 25 + 185823 GGGGGCAGCCCAAGACTCAGGCTCA s panTro4.chr6 170714080 25 + 172623881 GGGGGCAGCCCAAGACTCAGGCTCA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468276 25 + 174210431 CGGGGCAGCCCAAGACTCAGGCTCA i ponAbe2.chr6 C 0 T 134 s nomLeu3.chr3 156327847 25 + 157873769 GGGGATAGCCAGGAACATTGGCCCC i nomLeu3.chr3 T 160 C 0 s macFas5.chr4 169099787 25 - 170955103 GGGGATAACCAGGGACACTGGCCCT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163918470 25 + 165299245 CAGGACAGCCCGAGACTCAGGCTCA i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169910265 25 + 171630274 GGAGGCAGCGAGGGACTCAGGCTCA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C e chlSab2.chr13 96704471 48 + 98384682 T e rheMac3.chr4 168145406 48 + 169853907 T a score=58974.000000 s hg38.chr6_KB021644v2_alt 126322 25 + 185823 GGTTTTCCACCTGGATCTTGGAAAG s panTro4.chr6 170714105 25 + 172623881 GGTTTTCCACCTGGATCTGGGAAAG i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156327872 25 + 157873769 GGTTTTCCACCTGGATCTGGGAATG i nomLeu3.chr3 C 0 I 1 s rheMac3.chr4 168145358 25 + 169853907 GGTTTTCCACCTGGATCTGGGAAGG i rheMac3.chr4 T 48 C 0 s macFas5.chr4 169099812 25 - 170955103 GGTTTTCCACCTGGATCTGGGAAGG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163918495 25 + 165299245 GGTTTTCCACTTGGATCTGGGAATG i papAnu2.chr4 C 0 T 79 s chlSab2.chr13 96704423 25 + 98384682 GGTTTTCCACCTGGATCTGGGAAAG i chlSab2.chr13 T 48 C 0 s calJac3.chr4 169910290 25 + 171630274 GGCTCTCCACCTGGATCTGGGAATG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C e ponAbe2.chr6 172468301 134 + 174210431 T a score=16052.000000 s hg38.chr6_KB021644v2_alt 126347 5 + 185823 AGACA s panTro4.chr6 170714130 5 + 172623881 AGACA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468167 5 + 174210431 AGACA i ponAbe2.chr6 T 134 C 0 s nomLeu3.chr3 156327898 5 + 157873769 AGGCA i nomLeu3.chr3 I 1 C 0 s rheMac3.chr4 168145383 5 + 169853907 AGACA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169099837 5 - 170955103 AGACA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163918441 5 + 165299245 AGACA i papAnu2.chr4 T 79 C 0 s chlSab2.chr13 96704448 5 + 98384682 AGACA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169910315 5 + 171630274 AGACA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C a score=5348.000000 s hg38.chr6_KB021644v2_alt 126352 2 + 185823 TC s panTro4.chr6 170714135 2 + 172623881 TC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468172 2 + 174210431 TC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156327903 2 + 157873769 TC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168145388 2 + 169853907 TC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169099842 2 - 170955103 TC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163918446 2 + 165299245 TC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96704453 2 + 98384682 TC i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169910320 0 + 171630274 C e canFam3.chr1 56193179 0 + 122678785 C a score=137196.000000 s hg38.chr6_KB021644v2_alt 126354 47 + 185823 ACACAGCTCAGCCTCTAGGAGGCGGGGCAGCCCGAGACTCAGGCTCA s panTro4.chr6 170714137 47 + 172623881 ACACAGCTCAGCGTCCAGGAGTGGGGGCAGCCCAAGACTCAGGCTCA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468174 47 + 174210431 ACACAGCTCAGCTTCCAGGAGGCGGGGCAGCCCGAGACTCAGGCTCA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156327905 47 + 157873769 ACACAGCTCAGCTTCTAGGAGGCGGGGCAGCCCGAGACTCAGGCTCA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168145390 47 + 169853907 ACACAGCTCAGCGTCCAGGAGGCGGGGCAGCCCGAGACTCAGGCTCA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169099844 47 - 170955103 ACACAGCTCAGCGTCCAGGAGGCGGGGCAGCCCGAGACTCAGGCTCA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163918448 47 + 165299245 ACACAGCTCAGCTTCTAGGAGGCAGGACAGCCCGAGACTCAGGCTCA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96704455 47 + 98384682 ACACAGCTCAGCGTCCAGGAGGCGGTGCAGCCCGAGACTCAGGCTCA i chlSab2.chr13 C 0 T 79 s calJac3.chr4 169910320 47 + 171630274 ACACAACTCAGCTTCCAGGAGGGGAGGCTGTGAAGGACTCAGGCTCA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C a score=33404.000000 s hg38.chr6_KB021644v2_alt 126401 10 + 185823 GGTTTTCCAC s panTro4.chr6 170714184 10 + 172623881 GGTTTTCCAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468221 10 + 174210431 GGTTTTCCAC i ponAbe2.chr6 C 0 I 16 s nomLeu3.chr3 156327952 10 + 157873769 GGTTTTCCAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168145437 10 + 169853907 GGTTTTCCAC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169099891 10 - 170955103 GGTTTTCCAC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163918495 10 + 165299245 GGTTTTCCAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96704423 10 + 98384682 GGTTTTCCAC i chlSab2.chr13 T 79 C 0 s calJac3.chr4 169910367 10 + 171630274 GGCTTTCCAC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C a score=32678.000000 s hg38.chr6_KB021644v2_alt 126411 15 + 185823 CTGGACCTTGGAAAG s panTro4.chr6 170714194 15 + 172623881 CTGGATCTTGGAAAG i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156327962 15 + 157873769 CTGGATCTGGGAATG i nomLeu3.chr3 C 0 I 1 s rheMac3.chr4 168145447 15 + 169853907 CTGGATCTGGGAATG i rheMac3.chr4 C 0 T 104 s macFas5.chr4 169099901 15 - 170955103 CTGGATCTGGGAATG i macFas5.chr4 C 0 T 129 s papAnu2.chr4 163918505 15 + 165299245 TTGGATCTGGGAATG i papAnu2.chr4 C 0 I 1 s chlSab2.chr13 96704433 15 + 98384682 CTGGATCTGGGAAAG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169910377 15 + 171630274 CTGGATCTGGGAATG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C e ponAbe2.chr6 172468231 16 + 174210431 I a score=43495.000000 s hg38.chr6_KB021644v2_alt 126426 27 + 185823 AGACATCACACAGCTCAGCGTCCAGGA s panTro4.chr6 170714209 27 + 172623881 AGACATCACACAGCTCAGCTTCTAGGA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468247 27 + 174210431 AGACATCACACAGCTCAGCTTTCAGGA i ponAbe2.chr6 I 16 C 0 s nomLeu3.chr3 156327978 27 + 157873769 AGGCATCACACAGCTCAACGTCCAGGA i nomLeu3.chr3 I 1 C 0 s papAnu2.chr4 163918521 27 + 165299245 AGACATCACACAGCTCAGCTTCTAGGA i papAnu2.chr4 I 1 T 237 s chlSab2.chr13 96704448 27 + 98384682 AGACATCACACAGCTCAGCGTCCAGGA i chlSab2.chr13 C 0 I 2 s calJac3.chr4 169910392 25 + 171630274 AGACA--ACACAACTCAGCTTCCAGGA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C e rheMac3.chr4 168145462 104 + 169853907 T e macFas5.chr4 169099916 129 - 170955103 T a score=-2465.000000 s hg38.chr6_KB021644v2_alt 126453 3 + 185823 -GGC s panTro4.chr6 170714236 3 + 172623881 -GGC i panTro4.chr6 C 0 I 1 s ponAbe2.chr6 172468274 3 + 174210431 -GGC i ponAbe2.chr6 C 0 T 215 s nomLeu3.chr3 156328005 3 + 157873769 -GGC i nomLeu3.chr3 C 0 I 81 s macFas5.chr4 169099787 2 - 170955103 -GG- i macFas5.chr4 T 129 C 0 s papAnu2.chr4 163918311 2 + 165299245 -GG- i papAnu2.chr4 T 237 C 0 s chlSab2.chr13 96704477 2 + 98384682 -CG- i chlSab2.chr13 I 2 C 0 s calJac3.chr4 169910417 3 + 171630274 GGG- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C e rheMac3.chr4 168145462 104 + 169853907 T a score=23394.000000 s hg38.chr6_KB021644v2_alt 126456 23 + 185823 -GGGCAGCCCGAGACTCAGGCTCA s panTro4.chr6 170714240 23 + 172623881 -GGGCAGCCGGAGACTCAGGCTCA i panTro4.chr6 I 1 C 0 s nomLeu3.chr3 156328089 23 + 157873769 -GGGCAGCCTGGGACGTGGGTGca i nomLeu3.chr3 I 81 C 0 s macFas5.chr4 169099789 23 - 170955103 -GGATAACCAGGGACACTGGCCCT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163918313 23 + 165299245 -GGATAACCAGGGACACTGGCCCT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96704479 23 + 98384682 -GTGCAGCCCGAGACTCAGGCTCA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169910420 24 + 171630274 GAGGCAGCGAGGGACTCAGGCTCA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C e rheMac3.chr4 168145462 104 + 169853907 T e ponAbe2.chr6 172468277 215 + 174210431 T a score=21952.000000 s hg38.chr6_KB021644v2_alt 126479 7 + 185823 GGTTTTC s panTro4.chr6 170714263 7 + 172623881 GGTTTTC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468062 7 + 174210431 GGTTTTC i ponAbe2.chr6 T 215 C 0 s nomLeu3.chr3 156328112 7 + 157873769 ggttttc i nomLeu3.chr3 C 0 T 220 s rheMac3.chr4 168145358 7 + 169853907 GGTTTTC i rheMac3.chr4 T 104 C 0 s macFas5.chr4 169099812 7 - 170955103 GGTTTTC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163918336 7 + 165299245 GGTTTTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96704502 7 + 98384682 GGTTTTC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169910444 7 + 171630274 GGCTCTC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C a score=41454.000000 s hg38.chr6_KB021644v2_alt 126486 18 + 185823 CACCTGGACCTTGGAAAG s panTro4.chr6 170714270 18 + 172623881 CACCTGGATCTTGGAAAG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468069 18 + 174210431 CACCTGGATCTGGGAAAG i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168145365 18 + 169853907 CACCTGGATCTGGGAAGG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169099819 18 - 170955103 CACCTGGATCTGGGAAGG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163918343 18 + 165299245 CACCTGGATCTGGGAAAG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96704509 18 + 98384682 CACCTGGATCTGGGAATG i chlSab2.chr13 C 0 T 79 s calJac3.chr4 169910451 18 + 171630274 CACCTGGATCTGGGAATG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C e nomLeu3.chr3 156328119 220 + 157873769 T a score=2548.000000 s hg38.chr6_KB021644v2_alt 126504 1 + 185823 A s panTro4.chr6 170714288 1 + 172623881 A i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468087 1 + 174210431 A i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168145383 1 + 169853907 A i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169099837 1 - 170955103 A i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163918361 1 + 165299245 A i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96704448 1 + 98384682 A i chlSab2.chr13 T 79 C 0 s calJac3.chr4 169910469 1 + 171630274 A i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C e nomLeu3.chr3 156328119 220 + 157873769 T a score=72207.000000 s hg38.chr6_KB021644v2_alt 126505 26 + 185823 GACATCACACAGCTCAATGTCCAGGA s panTro4.chr6 170714289 26 + 172623881 GACATCACACAGCTCAGCTTCTAGGA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468088 26 + 174210431 GCCATCACACAGCTCAGCTTCCAGGA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156327899 26 + 157873769 GGCATCACACAGCTCAGCTTCTAGGA i nomLeu3.chr3 T 220 C 0 s rheMac3.chr4 168145384 26 + 169853907 GACATCACACAGCTCAGCGTCCAGGA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169099838 26 - 170955103 GACATCACACAGCTCAGCGTCCAGGA i macFas5.chr4 C 0 T 79 s papAnu2.chr4 163918362 26 + 165299245 GACATCACACAGCTCAGCGTCCAGGA i papAnu2.chr4 C 0 T 79 s chlSab2.chr13 96704449 26 + 98384682 GACATCACACAGCTCAGCGTCCAGGA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169910470 24 + 171630274 GACA--ACACAACTCAGTTTCCAGGA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C a score=2987.000000 s hg38.chr6_KB021644v2_alt 126531 3 + 185823 -GGT s panTro4.chr6 170714315 3 + 172623881 -GGC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468114 3 + 174210431 -GGC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156327925 3 + 157873769 -GGC i nomLeu3.chr3 C 0 I 80 s rheMac3.chr4 168145410 3 + 169853907 -GGC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169099785 3 - 170955103 -GGG i macFas5.chr4 T 79 C 0 s papAnu2.chr4 163918309 3 + 165299245 -GGG i papAnu2.chr4 T 79 C 0 s chlSab2.chr13 96704475 3 + 98384682 -GGC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169910494 3 + 171630274 GGG- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C a score=54417.000000 s hg38.chr6_KB021644v2_alt 126534 24 + 185823 GGGGCAGCCCAAGACTCAGGCTCA s panTro4.chr6 170714318 24 + 172623881 GGGGCAGCCCGAGACTCAGGCTCA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468117 24 + 174210431 GGGGCAGCCCAAGACTTAGGCTCA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156328008 24 + 157873769 GGGGCAGCCCGAGACTCAGGCTCA i nomLeu3.chr3 I 80 C 0 s rheMac3.chr4 168145413 24 + 169853907 GGGGCAGCCCGAGACTCAGGCTCA i rheMac3.chr4 C 0 T 79 s macFas5.chr4 169099788 24 - 170955103 GGGATAACCAGGGACACTGGCCCT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163918312 24 + 165299245 GGGATAACCAGGGACACTGGCCCT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96704478 24 + 98384682 GGTGCAGCCCGAGACTCAGGCTCA i chlSab2.chr13 C 0 T 79 s calJac3.chr4 169910497 24 + 171630274 GAGGCAGCGAGGGACTCAGGCTCA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C a score=87422.000000 s hg38.chr6_KB021644v2_alt 126558 30 + 185823 GGTTTTCCACCTGGATCTGGGAAAG-AGACA s panTro4.chr6 170714342 30 + 172623881 GGTTTTCCACCTGGATCTGGGAAAG-AGACA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468141 31 + 174210431 GGTTTTCCACCTGGATCTGGGAATGAAGACA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156328032 31 + 157873769 GGTTTTCCACCTGGATCTAGGAATGAAGGCA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168145358 30 + 169853907 GGTTTTCCACCTGGATCTGGGAAGG-AGACA i rheMac3.chr4 T 79 C 0 s macFas5.chr4 169099812 30 - 170955103 GGTTTTCCACCTGGATCTGGGAAGG-AGACA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163918336 30 + 165299245 GGTTTTCCACCTGGATCTGGGAAAG-AGACA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96704423 30 + 98384682 GGTTTTCCACCTGGATCTGGGAAAG-AGACA i chlSab2.chr13 T 79 C 0 s calJac3.chr4 169910521 30 + 171630274 AGCTCTCCACCTGGATCTGGGAATG-AGACA i calJac3.chr4 C 0 T 154 e canFam3.chr1 56193179 0 + 122678785 C a score=5348.000000 s hg38.chr6_KB021644v2_alt 126588 2 + 185823 TC s panTro4.chr6 170714372 2 + 172623881 TC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468172 2 + 174210431 TC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156328063 2 + 157873769 TC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168145388 2 + 169853907 TC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169099842 2 - 170955103 TC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163918366 2 + 165299245 TC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96704453 2 + 98384682 TC i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169910551 154 + 171630274 T e canFam3.chr1 56193179 0 + 122678785 C a score=73469.000000 s hg38.chr6_KB021644v2_alt 126590 24 + 185823 ACACAGCTCAGCATCCAGGAGGCC s panTro4.chr6 170714374 24 + 172623881 ACACAGCTCAGCGTCCAGGAGGCG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468174 24 + 174210431 ACACAGCTCAGCTTCCAGGAGGCG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156328065 24 + 157873769 ACGCAGCTCAGCGTCCAGGAGGCG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168145390 24 + 169853907 ACACAGCTCAGCGTCCAGGAGGCG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169099844 24 - 170955103 ACACAGCTCAGCGTCCAGGAGGCG i macFas5.chr4 C 0 T 79 s papAnu2.chr4 163918368 24 + 165299245 ACACAGCTCAGCGTCCAGGAGGCA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96704455 24 + 98384682 ACACAGCTCAGCGTCCAGGAGGCG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169910397 24 + 171630274 ACACAACTCAGCTTCCAGGAGGGG i calJac3.chr4 T 154 C 0 e canFam3.chr1 56193179 0 + 122678785 C a score=53281.000000 s hg38.chr6_KB021644v2_alt 126614 23 + 185823 GGGCAGCCTGAGACTCAGGCTCA s panTro4.chr6 170714398 23 + 172623881 GGGCAGCCTGAGACTCAGGCTCA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468198 23 + 174210431 GGGCAGCCCGAGACTCAGGCTCA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156328089 23 + 157873769 GGGCAGCCTGGGACGTGGGTGca i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168145414 23 + 169853907 GGGCAGCCCGAGACTCAGGCTCA i rheMac3.chr4 C 0 T 79 s macFas5.chr4 169099789 23 - 170955103 GGATAACCAGGGACACTGGCCCT i macFas5.chr4 T 79 C 0 s papAnu2.chr4 163918392 23 + 165299245 GGACAGCCCGAGACTCAGGCTCA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96704479 23 + 98384682 GTGCAGCCCGAGACTCAGGCTCA i chlSab2.chr13 C 0 T 79 s calJac3.chr4 169910421 23 + 171630274 AGGCAGCGAGGGACTCAGGCTCA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C a score=21952.000000 s hg38.chr6_KB021644v2_alt 126637 7 + 185823 GGTTTTC s panTro4.chr6 170714421 7 + 172623881 GGTTTTC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468221 7 + 174210431 GGTTTTC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156328112 7 + 157873769 ggttttc i nomLeu3.chr3 C 0 T 227 s rheMac3.chr4 168145358 7 + 169853907 GGTTTTC i rheMac3.chr4 T 79 C 0 s macFas5.chr4 169099812 7 - 170955103 GGTTTTC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163918415 7 + 165299245 GGTTTTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96704423 7 + 98384682 GGTTTTC i chlSab2.chr13 T 79 C 0 s calJac3.chr4 169910444 7 + 171630274 GGCTCTC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C a score=30765.000000 s hg38.chr6_KB021644v2_alt 126644 12 + 185823 CACCTGGATCTC s panTro4.chr6 170714428 12 + 172623881 CACCTGGATCTG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468228 12 + 174210431 CACCTGGATCTG i ponAbe2.chr6 C 0 T 159 s rheMac3.chr4 168145365 12 + 169853907 CACCTGGATCTG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169099819 12 - 170955103 CACCTGGATCTG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163918422 12 + 165299245 CACCTGGATCTG i papAnu2.chr4 C 0 T 79 s chlSab2.chr13 96704430 12 + 98384682 CACCTGGATCTG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169910451 12 + 171630274 CACCTGGATCTG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C e nomLeu3.chr3 156328119 227 + 157873769 T a score=27855.000000 s hg38.chr6_KB021644v2_alt 126656 11 + 185823 GGAAAGAGACA s panTro4.chr6 170714440 11 + 172623881 GGAAAGAGACA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468081 11 + 174210431 GGAAAGAGCCA i ponAbe2.chr6 T 159 C 0 s nomLeu3.chr3 156327892 11 + 157873769 GAATGAAGGCA i nomLeu3.chr3 T 227 C 0 s rheMac3.chr4 168145377 11 + 169853907 GGAAGGAGACA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169099831 11 - 170955103 GGAAGGAGACA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163918355 11 + 165299245 GGAAAGAGACA i papAnu2.chr4 T 79 C 0 s chlSab2.chr13 96704442 11 + 98384682 GGAAAGAGACA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169910463 11 + 171630274 GGAATGAGACA i calJac3.chr4 C 0 T 154 e canFam3.chr1 56193179 0 + 122678785 C a score=5348.000000 s hg38.chr6_KB021644v2_alt 126667 2 + 185823 TC s panTro4.chr6 170714451 2 + 172623881 TC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468092 2 + 174210431 TC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156327903 2 + 157873769 TC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168145388 2 + 169853907 TC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169099842 2 - 170955103 TC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163918366 2 + 165299245 TC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96704453 2 + 98384682 TC i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169910474 154 + 171630274 T e canFam3.chr1 56193179 0 + 122678785 C a score=309805.000000 s hg38.chr6_KB021644v2_alt 126669 113 + 185823 ACACAGCTCAGCATCCAGGAGGCG-----------------------------------------------------------------------------GGGCAGCCCAAGACTCAGGCTCAGGTTTTCCATCTGGATCTGGGAATGAAGACATCACACAGCTCAGCGTCCAGGAGGTGGGGCAGCCC s panTro4.chr6 170714453 190 + 172623881 ACACAGCTCAGCATCCAGGAGGCGGGCAGCCCAAGACTCAGGCCCAGGTTTTCCACCTGGACCTTGGAAGAGACATCACACAGCTCAGCATCCAGGAGGCAGGGCAGCCCAAAACTTAGGCTCAGGTTTTCCACCTGGATCTGGGAATGAAGACATCACACAGCTCAGCTTTCAGGAGGCGGGGCAGCCT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468094 113 + 174210431 ACACAGCTCAGCTTCCAGGAGGCG-----------------------------------------------------------------------------GGGCAGCCCAAGACTTAGGCTCAGGTTTTCCACCTGGATCTGGGAATGAAGACATCACACAGCTCAGCTTCCAGGAGGCGGGGCAGCCC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156327905 113 + 157873769 ACACAGCTCAGCTTCTAGGAGGCG-----------------------------------------------------------------------------GGGCAGCCCGAGACTCAGGCTCAGGTTTTCCACCTGGATCTGGGAATGAAGGCATCACACAGCTCAACGTCCAGGAGGCGGGGCAGCCC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168145390 113 + 169853907 ACACAGCTCAGCGTCCAGGAGGCG-----------------------------------------------------------------------------GGGCAGCCCGAGACTCAGGCTCAGGTTTTCCACCTGGATCTGGGAATGAAGACATCACACAGCTCAGCTTCTAGGAGGGGGGGCAGCCC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169099844 113 - 170955103 ACACAGCTCAGCGTCCAGGAGGCG-----------------------------------------------------------------------------GGGCAGCCCGAGACTCAGGCTCAGGTTTTCCACCTGGATCTGGGAATGAAGACATCACACAGCTCAGCTTCTAGGAGGGGGGGCAGCCC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163918368 113 + 165299245 ACACAGCTCAGCGTCCAGGAGGCA-----------------------------------------------------------------------------GGACAGCCCGAGACTCAGGCTCAGGTTTTCCACCTGGATCTGGGAATGAAGACATCACACAGCTCAGCTTCTAGGAGGCAGGACAGCCC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96704455 113 + 98384682 ACACAGCTCAGCGTCCAGGAGGCG-----------------------------------------------------------------------------GTGCAGCCCGAGACTCAGGCTCAGGTTTTCCACCTGGATCTGGGAATGAAGACATCACACAGCTCAGCTTCTAggaggcagggtagccc i chlSab2.chr13 C 0 T 80 s calJac3.chr4 169910320 110 + 171630274 ACACAACTCAGCTTCCAGGAGGGG-----------------------------------------------------------------------------AGGCTGTGAAGGACTCAGGCTCAGGCTTTCCACCTGGATCTGGGAATG-AGACA--ACACAACTCAGCTTCCAGGAGGGGAGGCAGCGA i calJac3.chr4 T 154 C 0 e canFam3.chr1 56193179 0 + 122678785 C a score=15183.000000 s hg38.chr6_KB021644v2_alt 126782 5 + 185823 GAGAC s panTro4.chr6 170714643 5 + 172623881 GAGAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468207 5 + 174210431 GAGAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156328018 5 + 157873769 GAGAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168145503 5 + 169853907 GGGAC i rheMac3.chr4 C 0 T 80 s macFas5.chr4 169099957 5 - 170955103 GGGAC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163918481 5 + 165299245 GAGAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96704488 5 + 98384682 GAGAC i chlSab2.chr13 T 80 C 0 s calJac3.chr4 169910430 5 + 171630274 GGGAC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C a score=46544.000000 s hg38.chr6_KB021644v2_alt 126787 16 + 185823 TCAGGCTCAGGTTTTC s panTro4.chr6 170714648 16 + 172623881 TCAGGCTCAGGTTTTC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468212 16 + 174210431 TCAGGCTCAGGTTTTC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156328023 16 + 157873769 TCAGGCTCAGGTTTTC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168145428 16 + 169853907 TCAGGCTCAGGTTTTC i rheMac3.chr4 T 80 C 0 s macFas5.chr4 169099962 16 - 170955103 GTGCGCTcagattttc i macFas5.chr4 C 0 T 80 s papAnu2.chr4 163918486 16 + 165299245 TCAGGCTCAGGTTTTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96704493 16 + 98384682 TCAGGCTCAGGTTTTC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169910435 16 + 171630274 TCAGGCTCAGGCTCTC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C a score=54958.000000 s hg38.chr6_KB021644v2_alt 126803 20 + 185823 CACCTGGATCTGGGAATGAA s panTro4.chr6 170714664 19 + 172623881 CACCTGGATCTCGGAAAG-A i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468228 20 + 174210431 CACCTGGATCTGGGAATGAA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156328039 20 + 157873769 CACCTGGATCTAGGAATGAA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168145444 20 + 169853907 CACCTGGATCTGGGAATGAA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169099898 20 - 170955103 CACCTGGATCTGGGAATGAA i macFas5.chr4 T 80 C 0 s papAnu2.chr4 163918502 20 + 165299245 CACTTGGATCTGGGAATGAA i papAnu2.chr4 C 0 I 80 s chlSab2.chr13 96704509 20 + 98384682 CACCTGGATCTGGGAATGAA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169910451 19 + 171630274 CACCTGGATCTGGGAATGA- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C a score=22030.000000 s hg38.chr6_KB021644v2_alt 126823 9 + 185823 GACATCACA s panTro4.chr6 170714683 9 + 172623881 GACATCACA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468248 9 + 174210431 GACATCACA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156328059 9 + 157873769 GGCATCACG i nomLeu3.chr3 C 0 T 80 s rheMac3.chr4 168145464 9 + 169853907 GACATCACA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169099918 9 - 170955103 GACATCACA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163918602 9 + 165299245 GACATCACA i papAnu2.chr4 I 80 C 0 s chlSab2.chr13 96704529 9 + 98384682 GACATCACA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169910470 7 + 171630274 GACAACA-- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C a score=83243.000000 s hg38.chr6_KB021644v2_alt 126832 30 + 185823 CAGCTCAGCGTCCAGGAGGTGGGGCAGCCC s panTro4.chr6 170714692 30 + 172623881 CAGCTCAGCGTCCAGGAGGCGGGGCAGCCC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468257 30 + 174210431 CAGCTCAGCTTTCAGGAGGCGGGGCAGCCC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156327988 30 + 157873769 CAGCTCAACGTCCAGGAGGCGGGGCAGCCC i nomLeu3.chr3 T 80 C 0 s rheMac3.chr4 168145473 30 + 169853907 CAGCTCAGCTTCTAGGAGGGGGGGCAGCCC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169099927 30 - 170955103 CAGCTCAGCTTCTAGGAGGGGGGGCAGCCC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163918611 30 + 165299245 CAGCTCAGCTTCTAGGAgggggggCAGCCC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96704538 30 + 98384682 CAGCTCAGCTTCTAggaggcagggtagccc i chlSab2.chr13 C 0 T 80 s calJac3.chr4 169910477 30 + 171630274 CAACTCAGTTTCCAGGAGGGGAGGCAGCGA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C a score=13918.000000 s hg38.chr6_KB021644v2_alt 126862 5 + 185823 GAGAC s panTro4.chr6 170714722 5 + 172623881 GAGAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468287 5 + 174210431 AAGAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156328018 5 + 157873769 GAGAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168145503 5 + 169853907 GGGAC i rheMac3.chr4 C 0 T 80 s macFas5.chr4 169099957 5 - 170955103 GGGAC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163918641 5 + 165299245 GGGAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96704488 5 + 98384682 GAGAC i chlSab2.chr13 T 80 C 0 s calJac3.chr4 169910507 5 + 171630274 GGGAC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C a score=58865.000000 s hg38.chr6_KB021644v2_alt 126867 28 + 185823 TCAGGCTCAGGTTTTC------CACCTGGTCCTT s panTro4.chr6 170714727 28 + 172623881 TCAGGCTCAGGTTTTC------CACCTGGATCTT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468292 28 + 174210431 TCAGGCTCAGGTTTTC------CACCTGGATCTG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156328023 28 + 157873769 TCAGGCTCAGGTTTTC------CACCTGGATCTA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168145428 28 + 169853907 TCAGGCTCAGGTTTTC------CACCTGGATCTG i rheMac3.chr4 T 80 C 0 s macFas5.chr4 169099962 32 - 170955103 GTGCGCTcagattttctgagctcacct--acctg i macFas5.chr4 C 0 T 157 s papAnu2.chr4 163918646 32 + 165299245 GTGGGCTCAGATTTTCTGAGCTCACCT--ACCTG i papAnu2.chr4 C 0 T 164 s chlSab2.chr13 96704493 28 + 98384682 TCAGGCTCAGGTTTTC------CACCTGGATCTG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169910512 28 + 171630274 TCAGGCTCAAGCTCTC------CACCTGGATCTG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C a score=13476.000000 s hg38.chr6_KB021644v2_alt 126895 6 + 185823 GGAAAG s panTro4.chr6 170714755 6 + 172623881 GGAAAG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468320 6 + 174210431 GGAATG i ponAbe2.chr6 C 0 I 1 s nomLeu3.chr3 156328051 6 + 157873769 GGAATG i nomLeu3.chr3 C 0 T 79 s rheMac3.chr4 168145456 6 + 169853907 GGAATG i rheMac3.chr4 C 0 T 79 s papAnu2.chr4 163918514 6 + 165299245 GGAATG i papAnu2.chr4 T 164 I 1 s chlSab2.chr13 96704521 6 + 98384682 GGAATG i chlSab2.chr13 C 0 T 79 s calJac3.chr4 169910540 6 + 171630274 GGAATG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C e macFas5.chr4 169099994 157 - 170955103 T a score=235129.000000 s hg38.chr6_KB021644v2_alt 126901 79 + 185823 AGACATCACACAGCTCAGCGTTCAGGAGGCGGGGCAGCCCAAGACTCAGGCTCAGGTTTTCCACCTGGATCTCAGAAAG s panTro4.chr6 170714761 79 + 172623881 AGACATCACACAGCTCAGCGTCCAGGAGGCGGGGCAGCCCAAGACTCAGGCTCAGGTTTTCCACCTGGATCTTGGAAAG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468327 79 + 174210431 AGACATCACACAGCTCAGCTTTCAGGAGGCGGGGCAGCCCGAGACTCAGGCTCAGGTTTTCCACCTGGATCTGGGAATG i ponAbe2.chr6 I 1 I 1 s nomLeu3.chr3 156327978 79 + 157873769 AGGCATCACACAGCTCAACGTCCAGGAGGCGGGGCAGCCCGAGACTCAGGCTCAGGTTTTCCACCTGGATCTAGGAATG i nomLeu3.chr3 T 79 T 158 s rheMac3.chr4 168145383 79 + 169853907 AGACATCACACAGCTCAGCGTCCAGGAGGCGGGGCAGCCCGAGACTCAGGCTCAGGTTTTCCACCTGGATCTGGGAATG i rheMac3.chr4 T 79 T 56 s macFas5.chr4 169099837 79 - 170955103 AGACATCACACAGCTCAGCGTCCAGGAGGCGGGGCAGCCCGAGACTCAGGCTCAGGTTTTCCACCTGGATCTGGGAATG i macFas5.chr4 T 157 T 56 s papAnu2.chr4 163918521 79 + 165299245 AGACATCACACAGCTCAGCTTCTAGGAGGCGGGGCAGCCCGAGACTCAGGCTCAGGTTTTCCACCTGGATCTGGGAATG i papAnu2.chr4 I 1 T 78 s chlSab2.chr13 96704448 79 + 98384682 AGACATCACACAGCTCAGCGTCCAGGAGGCGGTGCAGCCCGAGACTCAGGCTCAGGTTTTCCACCTGGATCTGGGAATG i chlSab2.chr13 T 79 T 56 s calJac3.chr4 169910546 77 + 171630274 AGACA--ACACAACTCAGCTTCCAGGAGGGGAGGCTGTGAAGGACTCAGGCTCAGGCTCTCCACCTGGATCTGGGAATG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C a score=546.000000 s hg38.chr6_KB021644v2_alt 126980 1 + 185823 A s panTro4.chr6 170714840 1 + 172623881 A i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468407 1 + 174210431 A i ponAbe2.chr6 I 1 C 0 s calJac3.chr4 169910623 1 + 171630274 A i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C e chlSab2.chr13 96704527 56 + 98384682 T e papAnu2.chr4 163918600 78 + 165299245 T e nomLeu3.chr3 156328057 158 + 157873769 T e rheMac3.chr4 168145462 56 + 169853907 T e macFas5.chr4 169099916 56 - 170955103 T a score=23544.000000 s hg38.chr6_KB021644v2_alt 126981 22 + 185823 GACATCACACAGCTCAGCTTCT s panTro4.chr6 170714841 22 + 172623881 GACATCACACAGCTCAGCATCC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468408 22 + 174210431 GACATCACACAGCTCAGCTTTC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156327899 22 + 157873769 GGCATCACACAGCTCAGCTTCT i nomLeu3.chr3 T 158 C 0 s papAnu2.chr4 163918522 22 + 165299245 GACATCACACAGCTCAGCTTCT i papAnu2.chr4 T 78 C 0 s calJac3.chr4 169910624 20 + 171630274 GACA--ATACAACTCAGCTTCC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C e chlSab2.chr13 96704527 56 + 98384682 T e rheMac3.chr4 168145462 56 + 169853907 T e macFas5.chr4 169099916 56 - 170955103 T a score=199215.000000 s hg38.chr6_KB021644v2_alt 127003 67 + 185823 AGGAGGCAGGGCAGCCCGAGACTCAGGCTCAGGTTTTCCACCTGGATCTGGGAATGAAGACATGACA s panTro4.chr6 170714863 67 + 172623881 AGGAGGCGAGGCAACCCGAGACTCAGGCTCAGGTTTTCCACCTGGATCTGGGAATGAAGACATGACA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468430 67 + 174210431 AGGAGGCGGGGCAGCCCGAGACTCAGGCTCAGGTTTTCCACCTGGATCTGGGAATGAAGACATCACA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156327921 67 + 157873769 AGGAGGCGGGGCAGCCCGAGACTCAGGCTCAGGTTTTCCACCTGGATCTGGGAATGAAGGCATCACA i nomLeu3.chr3 C 0 I 80 s rheMac3.chr4 168145406 67 + 169853907 AGGAGGCGGGGCAGCCCGAGACTCAGGCTCAGGTTTTCCACCTGGATCTGGGAATGAAGACATCACA i rheMac3.chr4 T 56 C 0 s macFas5.chr4 169099860 67 - 170955103 AGGAGGCGGGGCAGCCCGAGACTCAGGCTCAGGTTTTCCACCTGGATCTGGGAATGAAGACATCACA i macFas5.chr4 T 56 C 0 s papAnu2.chr4 163918544 67 + 165299245 AGGAGGCGGGGCAGCCCGAGACTCAGGCTCAGGTTTTCCACCTGGATCTGGGAATGAAGACATCACA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96704471 67 + 98384682 AGGAGGCGGTGCAGCCCGAGACTCAGGCTCAGGTTTTCCACCTGGATCTGGGAATGAAGACATCACA i chlSab2.chr13 T 56 C 0 s calJac3.chr4 169910644 64 + 171630274 AGGAGGGGAGGCTGTGAAGGACTCAGGCTCAGGCTCTCCACCTGGATCTGGGAATG-AGACAACA-- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C a score=242093.000000 s hg38.chr6_KB021644v2_alt 127070 89 + 185823 CAGCTCAGCgtccaggaggcagggcagcccgggacgtgggctcaggttttctgagctcatctacttggtctctcctcactcactgtatg s panTro4.chr6 170714930 89 + 172623881 CAGCTCAGCGTCCAGGAGGCAGGGCagcccgggacgtgggctcaggttttctgagctcatctacctggtctctcctcactcactgtatg i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468497 89 + 174210431 CAGCTCAGCTTCcaggaggcagggcagtccgggacgtgggctcaggttttctgagctcacctacctggtctctcctcactcaccgtgtg i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156328068 87 + 157873769 CAGCTCAGCGTCCAGGAGGCGGGGCAGCCTGGGACGTGGGTGcaggttttctgagctcacctacctggtctctcct--ctcaccctgtg i nomLeu3.chr3 I 80 C 0 s rheMac3.chr4 168145473 89 + 169853907 CAGCTCAGCTTCTAGGAGGGGGGGCAGCCCGGGACGTGCGCTcagattttctgagctcacctacctggtctctcctcactcaccatgtg i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169099927 89 - 170955103 CAGCTCAGCTTCTAGGAGGGGGGGCAGCCCGGGACGTGCGCTcagattttctgagctcacctacctggtctctcctcactcaccatgtg i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163918611 89 + 165299245 CAGCTCAGCTTCTAGGAgggggggCAGCCCGGGACGTGGGCTCAGATTTTCTGAGCTCACCTACCTGGTCTCTCCTCACTCACCATGTG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96704538 89 + 98384682 CAGCTCAGCTTCTAggaggcagggtagcccagcaagtgggctcagattttctgagctcagctacctggtctcttctcactcactatgtg i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169910708 87 + 171630274 CAACTCAGCTTCCAGGAGGCGGGTCAG-CCGggacttggactcaggctttttgagctcacc-gcctggtgtctcctcactcacgatgtg i calJac3.chr4 C 0 C 0 e canFam3.chr1 56193179 0 + 122678785 C a score=322101.000000 s hg38.chr6_KB021644v2_alt 127159 113 + 185823 acctcaggtaacttcctgagtgtcttcatgcctcagtttctccgtgtgc------aataggag------------ttttgtgaagattaattgaattaataactatgtcgggacaaatgtatcagctcctg s panTro4.chr6 170715019 113 + 172623881 acctcaggtaacttcctgagtgtcttcatgcctcagtttccccgtgtgc------aataggag------------ttttgtgaagattaattgaattaataactatgtcgggacaaatgtatcagctcctg i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468586 113 + 174210431 acctcaggtaacttcctgagtgtcttcgtgcctcagtttccccatgtgc------aataggag------------tttcgtgaagattaattgaattaataactatgtcgggacaaatgtatcagctcctg i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156328155 113 + 157873769 acctcaggtaacttcctgagtgtcttcatgcctcagtttccccatgtgc------aaTAGGAG------------TTTTGTGAAGATTAATTGCATTAATAACTACGTTGGGACAAATGTATCAGCTCCTG i nomLeu3.chr3 C 0 M 1058 s rheMac3.chr4 168145562 112 + 169853907 agcccaggtaacttcctgaatgccttcatgcctcagtttccccatgtgc------aaTAGGAG------------TTTTGTGAAGACTAATTGAA-TAATAACTATGTCGGAACAAATGTATCAGCTCTTG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169100016 112 - 170955103 agcccaggtaacttcctgaatgtcttcatgcctcagtttccccatgtgc------aaTAGGAG------------TTTTGTGAAGACTAATTGAA-TAATAACTATGTCGGAACAAATGTATCAGCTCTTG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163918700 112 + 165299245 AGCCCAGGTAACTTCCTGAATgtcttcatgcctcagtttccccatgtgc------aATAGGAG------------TTTTGTGAAGACTAATTGAA-TAATAACTATGTCGGAACAAATGTATCAGCTCTTG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96704627 112 + 98384682 acctcaggtaacttcctgaatgtcttcatgcctcagtttccccatgtgc------aaTAGGAG------------TTTTGTGACGACTAATTGAA-TAATAACTGTGTCGAAACAAATGTATCAGCTCTTG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169910795 109 + 171630274 acctcagttaacttcctgaatggcttcatgcctcagtttcctgaagggc-----aaataggag------------ttttgtgaagattaattgaattaataaatgtGTGAGGACAAAAGTATCAGC----- i calJac3.chr4 C 0 C 0 s canFam3.chr1 56193179 111 + 122678785 ACCTGCCGTAGCTTCCCAAACACCTTCATGCCCTGGTGACCTCACGAGCGAGTGGAACAGGAATGACAGCCGGGTTCTCGTGCGGATTGA----------------GTTGAGACAGGA----CAGGGCTTA i canFam3.chr1 C 0 C 0 a score=273701.000000 s hg38.chr6_KB021644v2_alt 127272 125 + 185823 gcacttggtaaTATAAGCCATGACTCTT-CACTGTTGTTATCATTTGATATTTGAGCTTAATGCCAAAAGTTTCTCCGGAGGAAGGTGCAGCTCTCTCGAAGGCGCTGAGCTCCAGCAGGGAATGT---- s panTro4.chr6 170715132 125 + 172623881 gcacttggtaaTATAAGCCATGACTCTT-CACTGTTGTTATCATTTCATATTTGAGCTTAATGCCAAAAGTTTCTCCGGAGGAAGGTGCAGCTCTCTCGAAGGCACTGAGCTCCAGCAGGGAATGT---- i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468699 125 + 174210431 gcacttggtaaTATAAGCCATGACTCTT-CACTGTTGTTATCATTTGATATTTGAGCTTATTGCCAAAGGTTTCTCTGGAGGAAGGTGCAGCTCTCTCGAAGGCACTGAGCTCCAGCAGGGAAGGT---- i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168145674 125 + 169853907 GCACTTGGTGATGTAAACCATGACTCTT-CACTGTTGTTATCATTTGATACTTGAGCTTATTGCCAAAGGTTTCTCTGCAGGAAGGTACAGCTCTCTCGAAGGCACTGAGCTCCGTTGGGGAACGT---- i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169100128 125 - 170955103 GCACTTGGTGATGTAAACCATGACTCTT-CACTGTTGTTATCATTTGATACTTGAGCTTATTGCCAAAGGTTTCTCTGCAGGAAGGTACAGCTCTCTGGAAGGCACTGAGCTCCGTTGGGGAACAT---- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163918812 125 + 165299245 GCACTTGGTGATGTAAACCATGACTCTT-CACTGTTGTTATCATTTGATACTTGAGCTTCTTGCCAAAGGTTTCTCTGCAGGAAGGTACAGCTCTCTCGAAGGCACTGAGTTCCGTTGGGGAACGT---- i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96704739 125 + 98384682 GCACTTGGTGATGTAAACCATGACTCTT-CACTGTTGTTACCATTTGATACTTGAGCTTATTACCAAAGGTCTCTCTGTAGGAAGGTGCAGCTCTCTCGAAGGTACTGAGCTCCGCTGGGGAACGT---- i chlSab2.chr13 C 0 I 106 s calJac3.chr4 169910904 122 + 171630274 --ACTTGGTACTATAGGCCATAACTTTT-CACTGTTGTTATCATTTCATACTTGAGGTCACTGCTAAAGGTTCCTCCGTGTGAAGGTGCCGCTCTCTCAAAGGCGCTGAGCTCCG-CGGGGAACGT---- i calJac3.chr4 C 0 C 0 s canFam3.chr1 56193290 114 + 122678785 GCACATGGTAA-GGAATCCACCAGTCGTACATT----TTACTGTTTGACGCTTGAGTTTAGTACCGAAGCTCTTGCAAGAGGA-----------CCTTGAGGTTGTTGGTCTTAGGTGGTGGTGGGGTTC i canFam3.chr1 C 0 C 0 e nomLeu3.chr3 156328268 1058 + 157873769 M a score=165021.000000 s hg38.chr6_KB021644v2_alt 127397 74 + 185823 ACATCCCAACTCATAATTTCCTTCAATGTT-AAAACATGAGCCAGTTGCCTGTGACTT-------TATTCCTTTCGTGCATT----- s panTro4.chr6 170715257 75 + 172623881 ACATCCCAACTCATAATTTTCTTCAATGTTAAAAAAATGAGCCAGTTGCCTGTGACTT-------TATTCCTTTCGTGCATT----- i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468824 74 + 174210431 ACTTCCCAACTCATGATTTCCTTCAATGTT-AAAACGTGAGCCAGTTGCCTGTGACTT-------TATTCCTTTCGTGCATT----- i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168145799 74 + 169853907 ACTTCCCAACTCATAATTTCCTTCAATGTT-AAAACGTGAGCCAGTTGCCTGTGACTT-------TATTCCTTTCATGCATT----- i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169100253 74 - 170955103 ACTTCCCAACTCATAATTTCCTTCAATGTT-AAAACGTGAGCCAGTTGCCTGTGACTT-------TATTCCTTTCATGCATT----- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163918937 74 + 165299245 ACTTCCCAACTCATAATTTCCTTCAATGTT-AAAACGTGAGCCAGTTGCCTGTGACTT-------TATTCCTTTCATGCATT----- i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96704970 74 + 98384682 ACTTCCCAACTCATCATTTCCTTCAGCGTT-AAAACGCGAGCCAGTTGCCTGTGACTT-------TATTCCTTTCATGCATT----- i chlSab2.chr13 I 106 C 0 s calJac3.chr4 169911026 81 + 171630274 ACCTCCCAACTCGGAATTCCCTTCAGTGTT-ACAACGTGACCCAGTGGCCTATGGCCTCCTTCGGCCTTCCTTTCATGCGTT----- i calJac3.chr4 C 0 C 0 s canFam3.chr1 56193404 78 + 122678785 ACTTCCCAAATCACAA-TCCCTGCAACACT-AGTACGTGGATCGTGCATGTGTGAATA-------CACACCTCACTTCTAATGAAGC i canFam3.chr1 C 0 C 0 e nomLeu3.chr3 156328268 1058 + 157873769 M a score=1644902.000000 s hg38.chr6_KB021644v2_alt 127471 547 + 185823 CGTGAGTTTACTATCAAGGAAATACAGGTAAGCT-CTTCACGTTTATGTTTTCACACTCTTAAAGGCAACTCTGATTCTGATGTTTTAGGCTTTAGTC----CATGTTTATCCTGTCTTCTAATTGTTCTAATTTTATGCATGTCTATAATAGTtgtcttatgtttcta-aattactttttatctttttatgttttatAGCTATACCCT---TTT-TCATGATTTTTAGTGCATTAATGCCTGGGAGTGACAGCTGTTTACAATTCAAATCCCACATTCTGCTGCGAACTCTCCTCCTCTGTGTCCGGAAGGTTCTATCC---ACTTTCCTTTTGTGCATTTAGTTATTGGCACTGCTCCTTCTCCCC-----------------TAAAAGAATTCTAAGCAATTA------------------CACTTGCTCCATTTCCCTTTAAGGACTCGAACTCACTTCTCCCAGCAAGTCACACTGGCTTACTTGGTCATTGATCTTATGTTTTAGTCTCATTTCCGAGAACCTGCTCATCTGCGGTTGCCTTGTGTGTGTTGGAGACCTTCTCAGAGATGGGGTCATTTTGACAAAGTC s panTro4.chr6 170715332 546 + 172623881 CGTGAGTTTACTATCAAGGAAATACAGGTAAGCT-CTTCACGTTTATGTTTCCACACTCTTAAAGGCAACTCCGATTCTGATGTTTCAGGCTTTAGTT----CATGTTTATCCTGTCTTCTAATTGTTCTAATTTTATGCATGTCTATAATAGTTGTCTTATGTTTCTA-AATTACCTTTTATCTTTTTATGTTTTATAGCTATACCCT---TTT-TCATGA-TTTTAGTGCATTAATGCCTGGGAGTGACAGCTGTTTACAATTCAAATCCCACATTCTGCTGCGAACTTTCCTCCTCTGTGTCCGGAAGGTTCTATCC---ATTTTCCTTTTGTGCATTTAGTTATTGGCACTGCTCCTTCTCCCC-----------------TAAAAGAATTCTAAGCAATTA------------------CATTTGCTCCATTTCCCTTTAAGGACTCGAACTCACTTCTCCCAGCGAGTCACACTGGCTTACTTGGTCATTGATCTTACGTTTTAGTCTCATTTCCGAGAAACTGCTCATCTGCGGTTGCCTTGTGTGTGTTGGAGACCTTCTCAGAGATGGGGTCATTTTGACAAAGTC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172468898 543 + 174210431 CGTGAGTTTACTATCAAGCAAATACAGGTAAGCT-CTTCACGTTTCTGTTTTCACACTCTTAAAGGCAACTCCGATTCTGATATTTTAGGCTTTAGTCAGTTCATGTTTATTCTGTCTTCTAATTGTTCTAATTTTATACACATCTATAATAGTTGTCTTATGTTTCTA-AATTACTT------TTTTAATGTTTTATAGCTATACCCT---TTT-TCATGA-TTTTAGTGCATTAATGCCTGGGAGTGACAGCTGTTTACAATTCATATCCCACATTCTGCTGCGAACTGTCCTCCTCTGTGTCCGGAAGGTTCTATCC---ACTTTCCTTTTGTGCATTTAGTTATTGGCACTGCTCCTTCTCCCC-----------------TAAAAGAATTCTAAGCAATTA------------------CACTTGCTCCATTTCCCTTTAAGGACTCGAACTCACTTCTCCCAG-AAATCACACTGGCTTACTTGGTCATTGATCTTATGTTTTAGTCTCATTTCTGAGAAGCTGCTCATCTGCAGTTGCCTTGTGTGTGTTGGAGACCTTCTCAGAGATGCAGTCATTTTGACAAAGTC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156329326 546 + 157873769 CGCGAGTTTACTATCAAGCAAATACAGGTAAGCT-CTTCACGTTTATGTCTTCACACTCTTAAAGGCAACTCTGATTCTGATATTTTAGGCTTTAGTT----CGTGTTTATCCTGTCTTCTAATTGTTCTAATTTTATACACATCTATCATAGTtgtcttatgtttcta-aattactttttatctttttatgttttatAGCTATACCCT---TTT-TCATGA-TTTTAGTGCATTAATGCCTGGGAGTGACAGCTGTTTACAATTCAAATCCCACATTCTGCTGCGAACTCTCCTCCTCTGTGTCTGGAAGGTTCTATCT---ACTTTCCTTTTGTGCATTTAGTTATTGGCACTGCTCTTTCTCCCC-----------------TAAAAGAATTCTAAGCAATTA------------------CACTTGCTCCATTTCCCTGTGAGGACTCAAACTCACTTCTCCCAGCAAGTCACACTGGCTTACTTGGTCACTGATCTTACGTTTTAGTCTCATTTCTGAGAAACTGCTCATCTGCGGTTGCCTTGTGTGTGTTGGAGACCTTCTCAGACATGGGGTCATTTTGACAAAGTC i nomLeu3.chr3 M 1058 C 0 s rheMac3.chr4 168145873 552 + 169853907 TGTGAGTTTACT-TCAAGCAAATACAGGTAAGCT-CTTCATGTTCATGTTTTCACACTCTCAAAGGCAACTCCAATTCTGATATTTTAGGCTTTAGTCAGTTCATGTTTATCCTGTCTTCAAATTGTTCTAATTTTATACATGTCTATAATAGTTATCTTAGGTTTCTA-AATTACTTTTTATCTTTTTATGTTTTATAGCTATACCTT---TTT-TCATGA-TTTTAGTGCATTAATGCCTGGGAGTGACAGCTGTTTACAATTCAAATCTCACATTCTGCTGCGAACTCTCCTCCTCTGTGTCCGGAAGGTTCTATCCACGACTTCCCTTTTGTGCATTTAGTTATTGGCACTGCTCTTTCTCCCC-----------------TAAAAGAATTCTAAGCAATTA------------------GACTTGCTTGATTTCCCTTTAAGGACTTGAACTCACTTCCCCCAGCGAGTCACACTGGCTTACTTCGTCATTAATCTTACGTTTTAGTCTCCTTTCCAAGAACCTGCTCATCTGCAGTTGCCCTGTCTGTGTTGGAGACCTTCTTGGAGATGGGGTCATTTTGATAAAGTC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169100327 552 - 170955103 TGTGAGTTTACT-TCAAGCAAATACAGGTAAGCT-CTTCATGTTCATGTTTTCACACTCTCAAAGGCAACTCCAATTCTGATATTTTAGGCTTTAGTCAGTTCATGTTTATCCTGTCTTCAAATTGTTCTAATTTTATACATGTCTATAATAGTTATCTTAGGTTTCTA-AATTACTTTTTATCTTTTTATGTTTTATAGCTATACCTT---TTT-TCATGA-TTTTAGTGCATTAATGCCTGGGAGTGACAGCTGTTTACAATTGAAATCTCACATTCTGCTGCGAACTCTCCTCCTCTGTGTCTGGAAGGTTCTATCCACGACTTCCCTTTTGTGCATTTAGTTATTGGCACTGCTCTTTCTCCCC-----------------TAAAAGAATTCTAAGCAATTA------------------GACTTGCTTGATTTCCCTTTAAGGACTTGAACTCACTTCCCCCAGCGAGTCACACTGGCTTACTTCGTCATTAATCTTACGTTTTAGTCTCCTTTCCAAGAACCTGCCCATCTGCAGTTGCCCTGTCTGTGTTGGAGTCCTTCTTGGAGATGGGGTCATTTTGATAAAGTC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163919011 552 + 165299245 TGTGAGTTTACT-TCAAGCAAATACAGGTAAGCT-CTTCATGTTCATGTTTTCACACTCTCAAAGGCAACTCCGATTCTGTTATTTTAGGCTTTAGTCAGTTCATGTTTATCCTGTCTTCAAATTGTTCTAATTTTATACATGTCTATAATAGTTATCTTAGGTTTCTG-aattactttttatctttttatgttttatagctatacctt---ttt-tcatga-ttttaGTGCATTAATGCCTGGGAGTGACAGCTGTTTACAATTCAAAACTCACATTCTGCTGCGAACTCTCCTCCTCTGTGTCCGGAAGGTTCTATCCACGACTTCCCTTTTGTGCATTTAGTTATTGGCACTGCTCTTTCTCCCC-----------------TAAAAGAATTTTAAGCAATTA------------------GACTTGCTTGATTTCCCTTTAAGGACTTGAACTCACTTCCCCCAGCGAGTCACACTGGCTTACTTCGTCATTAATCTTACGTTTTAGTCTCCTTTCCAAGAACCTGCCCATCTGCGGTTGCCTTGTCTGTGTTGGAGTCCTTCTTGGAAATGGGGTCATTTTGATAAAGTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96705044 552 + 98384682 TGTGAGTTTACT-TCTAGCAAATGCAGGTAAGCT-CTTCATGTTCATGTTTTCACACTCTCAAAGGCAACTCCGATGCTGATATTTTAGGCTTTAGTCAGTTCATGTTTATCCAGTCTTCACATTGTTCTAATTTTATACATGTCTATAATAGTTGTCTTAGGTTTCTA-AAGTACTTTTTATCTTTTTATGTTTTATAGCTATACATT---TTT-TCATGA-TTTTAGTGCATTAATGCCTGGGAGTGACAGCTGTTTACAATTCAGATCCCACACTCTGCTGCGAACTCCCCTCCTCTGTGTCCGGAAGGTTCTATCCACGACTTCCCTTTTGTGCATTTAGTTATTGGCACTGCTCTTTCTCCCC-----------------TAAAAGAATTCTAAGCAATTA------------------GACTTGCTTGATTTCCCTTTAAGGACTTGAACTCACTTCCCCCAGCGAATCACACTGGCTTACTTCGTCATTAATCTTACGTTTTAGTTTCCTTTCCAAGAACCTGCTCATCTGTGGTTGCCTTGTCTGTGTTGGAGACCTTCTTGGAGATGGGGTCGTTTTGATAAAGTC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169911107 571 + 171630274 CATGAGTTTACTGTGAAGCAAATACAGGTAAGTTCCTTCACGTTTCTGTTTCCACACTCTCAAAAGCAACTCCGATTC---TATTTTAGGATTTGGACAGTTCATGTTTATCTTGTCTTCTCATTGCTCCAATTTTGCACGTGTCTATAATGGTGGTCTTATATTTCTA-ATTTACTTTTTATCTTTTTATGTTTTATAACTATACCTTTTATTT-TAAAGA-TTTTGGTGCATTAATCCCTGGGAGTGACAACTGTTTACAATTCAAATCCCACGTTCTGCTGTGAACCCTGCTCCTCTGTGTCCAGAGGTTTCTATACACAACATTCCTTTTGTGCATTTAGTTACTGGCACTGCTTATTTTCCCC-----------------TAAAAGAACTCTAACCAATTAAAATAATCCTAAGCAATTAACTTGCTTAATTTCCCCCCGAGGACTTGAACGCACTTCCCCT-GCAAGTCACACCGGGTTACCTGATCGCTGATATTACATTTCAGTTTCGCTTCCCAGAGCCAGCTCATCTGCAGTTGCCTTGTATGTGTTGGAGCCCTGCTCATAGCTGGGGTCATTTTGACAAAGCC i calJac3.chr4 C 0 C 0 s canFam3.chr1 56193482 531 + 122678785 CATGAGTTTAAA-TCACGTGTGTATGGGTAAGTT-CTTCCAGTTTATAATTTCACA--------------TCTCATTGTCATACTTTAGATT------------TGGTTttcttgtctt----tttttctaattttatatatctctgttgtgactttgttatgcttttatttttactcttt---ttttaatgcttttccattttgtgtt---tttattATGA-TCCTAATGCATTAACTCCTGGGAGCTCCAGCTGTTCACTCTTCAAACCCCACATTTTGTGATGAAGGCTCCTGA-AAGTATTTGAAAGG-TATAACCACCACTTTCCATTTGTGC--CCGGTTACCAACACCTCCCTCCATCTCCAGGAAGTTCTAACCAGGGGAGAGGACTCTAGGTAACTA------------------GATCTCCTTAGGGCTCCTCACAGATATCATATTAACTTCCCCCAACAGATCATGCTGGCTT-CCTGGTCCTCAAGCTCATGTGCTGGCCCCATTTGAGAGGA-CAGGGGAACAGCAGCTTCCTGGCGTGTATAGGAGACCTTCTTGGGGACG-GGTCACCCTGAGGATGTC i canFam3.chr1 C 0 I 201 a score=1456170.000000 s hg38.chr6_KB021644v2_alt 128018 598 + 185823 ACAGAGCAAAAGCCATCACACATCAAAGCCAGGGCTCCTCTGATGCTGAGCCAGTGGTGGGGCCAGGGCTTCTCCGATGCTGAGCCGGTCCCTTTATCCCGTACCCCATCCTCC-CTGTGTGAAGGGCATGTGAGACAAAGCCCTTCCAAGTGCAGGACCTGACTCATAGCTCTGACACCTCTGCTTCCTGGGCCGTGTGTGGACAGGCACTGTCTTCTTGAGTGTAGACTG------TGTGTTTTTCATTCTTCCATCTGCGACCCGTGGACCTGGGCGTGGGCGATATGGCTGCATTGAGCCTCTAACTGGCTTTCTTATGATAAttatttttattttta---t-----ttttttgagacagagtcacgctcagttgcccaggctggagtgcagtggtgtaatctcagctcactgcaacctccgcctccccagctcaagccattctcctgcctcagcctcctgagtagctgggattacaggcacctgccaccatgcccagctaatttttgtattttt-agtagagat-------ggggtttcaccatgttgtccaggctggtcttgagctcctgacctcaggc-gattcgcctgcctcggcctcccaaagtgctggaatt s panTro4.chr6 170715878 564 + 172623881 ACAGAGCAAAAGCCGTCACACATCAAA----------------------------------GCCAGGGCTTCTCCGATGCTGAGCCAGTCCCTTTATCCCGTACCCCATCCTCC-CTGTGTGAAGGGCATGTGAGACAAAGCCCTTCCATGTGCAGGACCTGACTCATAGCTCTGACACCTCTGCTTCCTGGGCCGTGTGTGGACAGGCACTGTCTTCTTGAGTGTAGACTG------TGTGTTTTTCATTCTTCCATCTGCGACCCGTGGACCTGGGCGTGGGTGACATGGCTGCATTGAGCCTCTAACTGGCTTTCTTATGATAAttatttttattttta---t-----ttttttgagacagagtcccactcagttgcccaggctggagtgcagtggtgtaatctcagctcactgcaacctccgcctccccggctcaagccattctcctgcctcagcctcctgagtagctgggattacaggcacctgccaccatgcccagctaatttttgtattttt-agtagagat-------ggggttttaccatgttggccaggctggtcttgagctcctgacctcaggc-gatttgcctgcctcggcctcccaaagtgctatgatt i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172469441 609 + 174210431 ACAGAGCAAAAGCCATCACACATCAAAGCCAGGGCTCCTCTGATGCTGAGCCAGTGGTGGGGCCAGGGCTCCTCCAATGCTGAGCCTGTCCCTTTATCCCATGCCCCATCCTCC-CTGTGTGAAGGGTGTGTGAGACAAAGCCCTTCCATGTGCAGGACCTGACTCACAGCTCTTA-ACCTCTGCTTCCTGGGCCGTGTGTGGACAGGCACTGTCTTCTTGAGTGTAGACTG------TGTGTTTTTCATTCTTCCATCTGCGATCCATGGACCTGGGTGTGGGCGACATGGCTGCATTGAGCCTCTAACTGGCTTTCTTATGATAAttatttttattttta---tttttattttttgagacagagtcccactcagttgcccaggctggagtgcagtgccacaatctcagctcactgcaacctccacctccccggctcaagccattctcctgcctcagcctcctgagtagctgggattacaggcacacaccaccacgcccagctaatttttgtattttt-agtagacatgga-gggggggtttcaccatgttggtcaggctggtcttgaactcctgacctcaggcggatccgcctgcctcagcctcccaaagtgctgggatt i ponAbe2.chr6 C 0 I 525 s nomLeu3.chr3 156329872 565 + 157873769 ACAGAGCAGAAGCAGGCACACGTCAAA----------------------------------GCCAGGGCTCCTCCGATGCTGAGCCGGTCCCTTTATCCCGTACCCTATCCTCC-CTGTGTGAAGGGCGTGTGAGACAAAGCCCTTCCATGTGCAGGACCTGACTCATAGCTCTGACACCTCTGCTTCCTGGGCTGTGTGTGGTCAGACACTGTCTTCTTGAGTGTAGACTG------TGTGTTTTTCATTCTTCCATCTGCGATCCATGGACCCAGGCATGGGCGACATGGCTGCATTGAGACTCTAACTGGCTTTCTTATGATAAttatttttactttta---t-----ttttttgagacagagtcccgctcagttgcccaggctggagtgcagtgccacaatctcagctcactgcaacctccgccgccccggctcaagcccttctcctgcctcagcctcctgagtagctgggattacaggcacctgccaccacgcccagctaatttttgtatttttaaatagagat-------ggggtttcaccatgttggccaggctggtcttgaactcctgacctcaggc-gatctgcccgcctcggcctcccaaagtgctgggatt i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168146425 566 + 169853907 TCAGAGCAGAGGCAGTCACATGTCAAA----------------------------------GCCA-CGTTCCTCCGATGCTGAGCCGGTCCCTTTATTCCGTGCCCCATCCTCCTCTGTGTGAAGGACGAGTCAGACAAGGCCCTTCCGTGTACAGGACCTGACTCATAGCTCTGAAACCTCTGCTTCCTGGGCCATGTGTGGACGGGCACTGTCTCCTTGAGTGTACACTG------TGTGGTTTTCATTCTTCCATCCGTGGCCTGTGGACCTGGGAATAGGCGACGTGGCTGCATCGAGCCTCTAATTGGCTTTGTTACCATAAttatttttatttttatttt-----ttttttgagacagagtcccgctcagttgcccaggctggagtgcagtgccacaatctcagctcactgcaacctccgcctccccggctcaagccattctcctgcctcagcctcgtgagtagctgggattacaggcg-ccaccaccacgcccagctaatttttgtattttt-agtaaagac-------ggggtttcaccatgttggcccggctggtgttgaactcctgacctcaggt-gatccacctgcctcggcctcctgaagtgttgggatt i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169100879 565 - 170955103 TCAGAGCAGAGGCAGTCACATGTCAAA----------------------------------GCCA-TGCTCCTCCGATGCTGAGCCGGTCCCTTTATCCCGTGCCCCATCCTCCTCTGTGTGAAGGACGAGTCAGACAAGGCCCTTCCGTGTACAGGACCTGACTCATAGCTCTGAAACCTCTGCTTCCTGGGCCATGTGTGGACGGGCACTGTCTCCTTGAGTGTACACTG------TGTGGTTTTCATTCTTCCATCCGTGGCCTGTGGACCTGGGAATAGGCGACGTGGCTGCATCGAGCCTCTAATTGGCTTTCTTACCATAAttatttttattttta-ttt-----ttttttgagacagagtcccgctcagttgcccaggctggagtgcagtgccacaatctcagctcactgcaacctccgcctccccggctcaagccattctcctgcctcagcctcctgagtagctgggattacaggcg-ccgccaccacgcccagctaatttttgtattttt-agtaaagac-------ggggtttcaccatgttggcccggctggtgttgaactcctgacctcaggt-gatccacctgcctcggcctcctgaagtgttgggatt i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163919563 563 + 165299245 TCAGAGCAGAGGCAGTCACATGTCAAA----------------------------------GCCA-TGCTCCTCCAATGCTGAGCTGGTCCCTTTATCCCATGCCCCATCTTCTCCTGTGTGAAGGACGAGTGAGACAAAGCCCTTCCGTGTACAGGACCTGACTC--AGctctgaaacctctgcttcctgggccaTGTGTGGACGGGCACTGTCTCCTTGAGTGTACACTG------TGTGGTTTTCATTCTTCCATTCGTGGCCTGTGGACCTGGGAATAGGCGACATGGCTGCATTGAGCCTCTAATTGGCTTtcttaagataattatttttattttta--tt-----tttgttgagacagagtcctgctgagttgcccaggctggagtgcagtgccacaatctcagctcactgcaacctccgcctccccggctcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcacccaccaccacgcccagctaatttttgtattttt-agtaaagac-------ggggtttcaccatgttggcccggctggtgttgaactcctgacctcaggc-gatccacccgcctcggcctcccgaagtgttgggatt i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96705596 563 + 98384682 TCAGAGCTGAGGCAGTCACATGTCAAA----------------------------------GCCA-TGCTCCTCTGGTGCTGAGCCGGTCCCTTTATCCCGTGCCCCATCCTCCCCTGCGTGAAGGACGAGTGAGACAAAGCCCTTCCGTGTACAGGACCCGACTC--AGCTCCGACACCTCTGCTTCCTGGGCCATGTGTGGACGGGCACTGTCTTCTTGAGTGTACACTG------TGTGGTTTTCATTCTTCCATCCGTGACCTGTGGACCTGGGCATGAGCGACATGGCTGCATTGAGCCTCTAATTGGCTTTCTTACGATAAttatttttattttta--tt-----ttttttgagacagagtcccgctcagttgcccaggctggagtgcagtgccacaatctcagctcactgcaacctctgcttccccggctcaagccattctcctgcctcagcctcctgagtagctgggattacaggcgcccaccaccacgcccagctaatttttgtatttgt-tgtaaagac-------agggtttcaccatgttggcccagctggtgttgaactcctgacctcaggt-gatccacctgcctcggcctccagaagtgttgggatt i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169911678 501 + 171630274 ACAGAGCGGAGGCCTTCACGTGTCGAA----------------------------------GCCAGGGCTCCCCCGATGCTGAGCTGGTCCCATTATCCCCTGGCCTGTCCTCCCCTGTGTGGAGGGTGTGGGAGACAAAGCCCTTCCACGTGCAGGACCTGAGTCACAGCTCCGACGCCCCTGCTGCCTGGGCC-TGTATGGACGGGCACCGTCTTCTTGAGTATAGACTTATAGACTGGGCTTTCCATTCCTTC-TCGTTTACCCATCGACCTGGGCG-----------------------------------------------------------------T-----------------gagtcttgctcagtcacccaggctggagtgcagtgatacaatctttatttgctgcaacctccgcctcctgggctcaagccattctcctgcctcagtctcccaag-agctaagattacaggcacccgccaccatgctcagctaatttttgtattttt-agtaaagatgaactatgaactttcaccgtgctggccaggctggtcttgaacccatgacctcaggt-gatccacccacctcagcttctcaaagtgctgggatt i calJac3.chr4 C 0 C 0 e canFam3.chr1 56194013 201 + 122678785 I a score=13496.000000 s hg38.chr6_KB021644v2_alt 128616 5 + 185823 acagg s panTro4.chr6 170716442 5 + 172623881 acagg i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156330437 5 + 157873769 acagg i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168146991 5 + 169853907 acagg i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169101444 5 - 170955103 acagg i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163920126 5 + 165299245 acagg i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96706159 5 + 98384682 acagg i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169912179 5 + 171630274 acagg i calJac3.chr4 C 0 I 2077 e canFam3.chr1 56194013 201 + 122678785 I e ponAbe2.chr6 172470050 525 + 174210431 I a score=23191.000000 s hg38.chr6_KB021644v2_alt 128621 15 + 185823 tgtgagccaccgcgc s panTro4.chr6 170716447 15 + 172623881 tgtgagccaccgtgc i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156330442 15 + 157873769 tgtgagccactgcgc i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168146996 15 + 169853907 cgtgagccactgcac i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169101449 15 - 170955103 cacgagccactgcac i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163920131 15 + 165299245 catgagccactgcac i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96706164 15 + 98384682 catgagccactgcac i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169912184 2077 + 171630274 I e canFam3.chr1 56194013 201 + 122678785 I e ponAbe2.chr6 172470050 525 + 174210431 I a score=171441.000000 s hg38.chr6_KB021644v2_alt 128636 99 + 185823 acggccTACAATAATATTTTTAAAACGGCTTTCTCCTATTTTCTTTGGCCTGTCTAAACTTAAGTATCCATA-TTTCTGTTTTCTGTGTTTGGata--tata s panTro4.chr6 170716462 95 + 172623881 acggccTACAATAATATTTTTTAAACGGCTTTCTCCTATTTTCTTTGGCCTGTCTAAACTTAAGTATCCATA-TTTCTGTTTTCTGTGTTTGG------AGA i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156330457 93 + 157873769 ccggccTACAATAATATTTTTATAAAGGCTTTTTCCTATTTTCTTTGGCCTGTCTAAACTTAAGTATCCATA-TTTCTGTTTTCTGTGTTTGG--------A i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168147011 101 + 169853907 ccggccTACAGTAATATTTTTAAAACGGCTTTCTCCTGTTTTCTTTGGCCTGTCTAAACTTAAGTGTCCATA-TTTCTGTTTTCTGTGTTTGGATACGTATA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169101464 101 - 170955103 ccggccTACAGTAATATTTTTAAAACGGCTTTCTGCTGTTTTCTTTGACCTGTCTAAACTTAAGTATCCATA-TTTCTGTTTTCTGTGTTTGGATACGTGTA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163920146 101 + 165299245 ccggcctacagtaatatttttaaaacggctttctcctgttttctttggcTTGTCTAAACTTAAGTATccata-tttctgttttctgtgtttggatacatata i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96706179 101 + 98384682 ccggccTACAGTAATATTTTTAAAACGGCTTTCTCCTGTTTTCTTTGGCCTGTCTAAACTTAAGTATCCATA-TTTCTGTTTTCTGTGTTTGGATACATATA i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56194214 94 + 122678785 ACAGCGTGCAGTGCTGTTGTAGCCACAGTATGTTCTAGTTCCTTCTCCTCTGCACAAATCTGGGTACCCATGTTTTCTATTTTCTACACACAAA-------- i canFam3.chr1 I 201 C 0 e calJac3.chr4 169912184 2077 + 171630274 I e ponAbe2.chr6 172470050 525 + 174210431 I a score=1274896.000000 s hg38.chr6_KB021644v2_alt 128735 571 + 185823 tatata-tatataatatTTT-CCCCATTTTC--------TCTCATTTTCCCTCAATTTCCTAAAATTTGCCTTTTTCC--------TTTTATTTTCTTATGACATTATTCTTGTCAAGTACAATTGCTTTTGAATACAAAGTATTTTGGTTTATGATGTTCATGATTTGTCCTGAGATCCTAAAATTTTTGAGGAGAAACCCTTGTCTTCACTTCTAAGACTATTTTATTTTAGTTCTTTTCTCTGCATCCCCCTTAACCAG-CTAATAACATTTTGTCTTGATTTCATAATATGATAGGTTTTCATCTT------TGTGACTACCATGTGGTCACTTTT-------ACTCACTAGGCTTTTGAACTCAATTT------AAACAGAATAACTTACCAGTGCAAAATATGAGGTTAGATGAGTAAGTTGGAATCAAAATTCTGCCATGTTGGGCAAATTATTCACCTACATATTGTGAAGTGTTGTG-TTATTTCTCCTTATTTATTCTTATGGGGTCTTATTAAAA----TCTTAGCATTTGTTAAAGAAAATAATATTCATCATTTAAAGACCAGACGGTTCAATCTAATGAATTTTAATA-ACACAACAAATT s panTro4.chr6 170716557 577 + 172623881 TATATA-TATATAATATTTTCCCCCATTTTC--------TCTCATTTTCCCTCAATTTCCTAAAATTTGCCTTTTTCCTTT---TATTTTATTTTCTCATGACATTATTCTTGTCAAGTACAATTGCTTTTGAATACAAAGTATTTTGGTTTATGATGTTCATGATTTGTCCTGAGATCCTAAAATTTTTGAGGAGAAACCCTTGTCTTCACTTCTAAGACTATTTTATTTTAGTTCTTTTCTCTGCATCCCCCTTAACCAG-CTAATAGCATTTTGTCTTGATTTCATAATATGATAGGTTTTCATCTT------TGTGACTATCATGTGGTCACTTTT-------ACTCACTAGGCTTTTGAACTCAATTT------AAACAGAATAACTTACCAGTGCAAAATATGAGGTTAGATGAGTAAGTTGGAATCAAAATTCTGCCATGTTGGGCAAATTATTCACCTACATATTGTGAAGTGTTGTG-TTATTTCTCCTTATTTATTCTTATTGGGTCTTATTAAAA----TCTTAGCATTTGTTAAAGAAAATAATATTCATCATTTAAAGACCAGACGGTTCAATCTAATGAATTTTAATA-ACACAACAAATT i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156330550 575 + 157873769 TATATA-TAAAAAATATTTTACCCCATTTTCTATTTTTTTCTCATTTACCCTCAATTTCCTAAAATTTGCCTTTTCCT-TT---CATTTTATTTTCTTATGACATTATTCTTGTCAAGTACAATTGCTTTTGAATACAAAGTGTTTTGGTTTATGATGTTCATGATTTGTCCTGAGATCCTAAATTTTTTGAGTAGAAACCCTTGTCTTCGCTTCTAAGACTATTTTATTTTGGTGCTTTTCTCTGCATCCCCCTTAACCAG-TTAATAGCATTTCGTCTTGATTTCATAATATGATAGGTTTTCATCTT------TGTGACTATCATATGGTCACTTCT-------ACTCACTAGGCTTTTGAACTCAGTTT------AAACAGAATAACTTACCCGTGCAAAATATGAGGTCAGAGGAGTAAGTTGGAATCAAAATTCTGCCATGTTGGGCAAATTATTCACCTACATATTGTGAAGTGTTGTA-TTATTTCTCCTTATTTATTCTTACTCGGTCTTATTAAAA----TCTTAGCATTTGTT----AAAATAATATTCATCATTTAAAGACCAGACAGCTCAATCTAATGAATTTCAATA-ACACATT----- i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168147112 579 + 169853907 CATATA-CATATAATATTT-CCCCCGTTTTC-----------CATTTTCCTTCAATTTCCTAAAATTTGCCTTTCTCCCTT---TATTTTATTTACTTCTTACATTATTCTTGTCAAGTACAATTGCTTTTGAATATAAAGTATTTTGGTTCATGATGTTCATGATTTTTCCTGAGATCCTAAAATTTTTGAGGAGAAATCCTTGTCTTCACTGATAAGACTATTTTATTTCAGTTCTTTTCTTTGCATCCCCCTTAACCAGTTTAATAGCATTTTGTCTTGATTTCGTAGTATGCTAGGTTTTCATCTT------TGTGACTATGCTGTGGTCATTTTT-----T-ACTCACTAGGCTTTTGAACTCAATTT------AAACAGAATAACTTACCGGTGCAAAATATGGGGTCAGATGAGTAAGTTGGAATCAAAATTCTGCCGTGTTGGGCAAATTATTCACCTACATGTTGTGAAGTGTTGTG-TTATTGCTCATTATTTATTCTTATTGGGTCTTAGTAAAATTATTCTTAGCATTTGTTAAAGAAAATAATATTCATCATTTAAAGACCAGACGGTTCGATCTAATGAATTTTAATA-ACACAACAAATT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169101565 579 - 170955103 CATATA-CATATAATATTT--CCCCGTTTTC-----------CATTTTCCTTCAATTTCCTAAAATTTGCCTTTCTCCCTT---TATTTTATTTACTTCTTACATTATTCTTGTCAAGTACAATTGCTTTTGAATATAAAGTATTTTGGTTCATGATGTTCATGATTTTTCCTGAGATCCTAAAATTTTTGAGGAGAAATCCTTGTCTTCACTGATAAGACTATTTTATTTCAGTTCTTTTCTTTGCATCCCCCTTAACCAGTTTAATAGCATTTTGTCTTGATTTCATAGTATGCTAGGTTTTCATCTT------TGTGACTATGCTGTGGTCATTTTT-----TAACTCACTAGGCTTTTGAACTCAATTT------AAACAGAATAACTTACCGGTGCAAAATATGGGGTCAGATGAGTAAGTTGGAATCAAAATTCTGCCGTGTTGGGCAAATTATTCACCTACATGTTGTGAAGTGTTGTG-TTATTGCTCATTATTTATTCTTATTGGGTCTTAGTAAAATTATTCTTAGCATTTGTTAAAGAAAATAATATTCATCATTTAAAGACCAGACGGTTCGATCTAATGAATTTTAATA-ACACAACAAATT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163920247 579 + 165299245 catata-catataatatttccccccattttc-----------cattttccttcaatttcctaaaatttgcctttctccctt---tattttatttacttcttacaTTATTCTTGTCAAGTACAATTGCTtttgaatacaaattattttggTTCATGATGTTCATGATTTGTCCTGAGATCCTAAAATTTTTGAGGAGAAACCCTTGTCTTCACTGATAAGActattttatttcagttcttttctttGCATCCCCCTTAACCAG-TTAATAGCGTTTTGTCTTGATTTCATAGTATGCTAGGTTTTCATCAT------TGTGACTATGATGTGGTCATTTTT-----T-ACTCACTAGGCTTTTGAACTCAATTT------CAACAGAATAACTTACCGGTGCAAAATATGGGGTCAGATGAGTAAGTTGGAATCAAAATTCTGCCGTGTTGGGCAAATTATTCACCTACATGTTGTGAAGTGTTGTG-TTATTGCtcattatttattcttatttggtcttattaaaattattcttagcatttgttaaagaaaataatattcatcATTTAAAGACCAGACGGTTCGATCTAATGAATTTTAATA-ACACAGCAAATT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96706280 579 + 98384682 CATATA-CATATAGTATTTCCCCCCGTTTTC-----------CATTTTCCTTCAATTTCCTAAAATTTGCCTTTCTCCCTT---TATTTTATTTACTTCTTACATTATTCTTGACAAGTACAATTGCTTTTGAATACAAAGTATTTTGGTTCAAGATGTTCATGATTTGTCCTGAGATCCTAAAATTTCTGAGGAGAAACCCTTGTCTTCACTGATAAGACTATTTTATTTCAGTTCTTTTCTTTGCATACCCCTTAACCAG-TTAATGGCGTTTTGGCTTGATTTCATAGTATGCTAGGTTTTCATCAT------TGTGACTATGATGTGGTCATTTGT-----T-AATCACTAGGCTTTTGAACTCAATTT------AAACAGAATAACTTACCGGTGCAAAATATGGGGTCAGATGAGTAAGTTGGAATCAAAATTCTGCCGTGTTGGGCAAATTATTCATCTACATGTTGTGAAGTGTTGTG-TTATTGCTCATTATTTATTCTTATTGGGTCTTATTAAAACTATTCTTAGCATTTGTTAAAGAAAATAATATTCATCATTTAAAGACCAGACGCTTCGATCTAATGAATTTTAATA-ACACAACAAATT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169914261 563 + 171630274 tatatatcatata-tattttcccccattttc-cattttccttcattttcccttagtttcctaaaatgtttctttccccctt---tattttatttacttattccatta---atgtcgaatacagttgcttttgaatctaaagtattttGGTTGGTGATGTTCATAACTTGTCCTGAGATCCAAACGTTGTTGAGGAGAAACGCTTGTCTTCGCTTCTAAGACGATTTTATTTTCATTCTTTTGTCTGCACCTCCCTTAAGTGG-TTAACAG-----TGTCTTGATTTCATAATGGGATAGGTTTTCATCTC------TGCAGCT--GGCGTGATCATTTTT-----T-TCTCACTAGGTTTTTGAACTCAA-TT------AAACAGAATAACTTTCTGGTGCAAAATGTGGGGTCAGATCAGTAAGTTTGAATCAAAATTCTGCCATCTTGGGCAAGTTATCCACCTACATATTATGACGTGTTGTG-TAATTTCTCCTGATTTATTCTTATTGGGTCTTGTTAAAGTTATTCTTAGCGCTTGCTAAAGAAAATAATATTTATCATTTAAAGACCAGGCGGTTTAATCTAATCA----------------CAAGTT i calJac3.chr4 I 2077 C 0 s canFam3.chr1 56194308 526 + 122678785 -AGATG-TATTTGATTTTT--------TTCC-----------CATT--------GTTTTAGAAACATTGCCTTTCCCCTTTACCAGCTCCTTCTACTTGTGGTGTTATTCTTGTTGCATTTGATTGCTTTGGAACACAAAGTATTTTGGTTCA-----------ATTTGTCCCCA-------------------------CTTTGTATTTGCT--TAATA--------------TTCTTATCACTTTA-CCTCCTTGACCAC-CTGATGGCGTTCGGTCTTGGTTTCTTAAAAGAATAGGTTTTTATCTTTCTAAGTTTGACAACGGTGTGATGGTTTTTATTTTC-TCCCCCTAGACCATTGAACGTAATTTTATGTGAAACAGTA-AATTTATCAGTACGAAATTGGGAATTAGAAATGTAAATCTGAATCAAAGTTTTGCCTCCTTAGGTCAG--ACCTATCAGCAGA-GACAAAGTGTTTTATTTTTTTCTCTTCCTTCAGCCTCCTTGAACCGTATTGAAATCGTCTTTGCCATTTGCTAAAGAAAAAAAAAATCATTATTTAAATACCAGGCAG-TCAGTCTAATGGATTTTAGTGCATCCAACAAATG i canFam3.chr1 C 0 C 0 e ponAbe2.chr6 172470050 525 + 174210431 I a score=910435.000000 s hg38.chr6_KB021644v2_alt 129306 372 + 185823 AAACCACG---TTTGCCCCATTCTGTAAACAGCGCTGCCTGCTTTTCTGTCCTGGCACAGTGTCCAGGCTTGGCCACGAGGGGGCACTTGAAACCTGCCTTTCGGTGCCTGGTCGTCGTCCCCTGAAGTGA-------AAAGTTGCCCTTCCGGTTATTTCCCTTCCTGTTTGTCTGCCTCC-GGGGTGTGTGGCTTCATTATCAGATCTCAGCAGCTTATGAACTTTAAAAAGGGTAATAAGCC-CTGTGAAAAC------CCCCTTTGTGCACGTTTTCAAAAATGTATTTAACATCCAAAA--------AGAATGTTATGACACTCACTGTCTCCACGAGTGAAAAtgtgt--gtgcacat-----tgtgtgtgtgt--------------------------------------------gcatgtatgtgtgcatccatacgtg s panTro4.chr6 170717134 354 + 172623881 AAACCACG---TTTGCCCCATTCTGTAAACAGCGCTGCCTGCTTTTCTGCCCTGGCACAGTGTCCAGGCTTGGCCACGAGGGGGCACTTGAAACCTGCCTTTCGGTGCCTGGTCGT------------------------------CCTTCCGGTTATTTCCCTTCCTATTTGTCTGCCTCC-GGGGTGTGTGGCTTCATTATCAGATCTCAGAAGCTTATGAACTTTAAAAAGGGTGATAAGCC-TTGTGAAAAC------CCCCTGTGTGCACGTTTTCAAAAATGTATTTAACATCCAAAA--------AGAATGTTATGACACTCACTGTCTCCACGAGTGAAAAtgtgt--gtgcacatgtgtgcgtgtgtgtgc--------------------------------------------gcatgtatgtAGGCATCCATATGtg i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172470575 350 + 174210431 AAACCACA---TTTGCCCCATTCTGTAAACAGCG-TGCCTGCTTTT-TGCCCTGGCACAGTGTCCAGGC-TGGCCACCA-GGGGCACTTGAAACCTGCCTTG-GGTGCCTGGTCGTCGTTCCCTGAAGTGA-------AAAGTTGCCCTTCTGGTTATTTCCCTTCCTATTTGTCTGCCTGT-GGGGTGTGTGGCTTCATTATCAGATCTCAGAAGCTTATGAACTTTAAAAAGGATAACAAGCC-CTGTGAAAAC------CCCCTTTGTGCACGTTTTCAAAAATGTATTTAACATCCAAAAAGAATGTTAGAATGTTATGACACTCACTGTCT---CGAGTGAAAA--TGT--GTGCACCtgtgtgcgtgtgtgtgc--------------------------------------------------------------------- i ponAbe2.chr6 I 525 C 0 s nomLeu3.chr3 156331125 414 + 157873769 AAACCACG---TTTGCCCCATTCTGTAAACGGCG-------CTCTTCTGCCCTGGCACAGTGTCCATAGTTGGCCACCAGGGGGCACTTGAAACCTGCCTTTCGGTGCCTGGTCGTAGTTCCCTGAAGTGA-------AAAGTTGCCCTTCCGGTTATTTCCCTTCCTATTTGTCTGCCTCC-GGGGTGTGTGGCTTCATTATCAGATCTCAGAAGCATATGAACTTTAAAAAGTGTAATAAGAC-CTGTGAAAAC------CCCCTTTGTTCACGTTTTCAAAAATGTATTTAACATCCAAAA--------AGAATGTTATGACACTCACTGTCTCCACGAGTGAAAAAgtgt--gtgcacgtgtgtgcgtgtgtgtgcatgtatgtatgcatctgtgtatgcgtgcatgcgtgtgcatgtgtgtatgtatgtatgcatccacatgtg i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168147691 376 + 169853907 AAACCATG---TTCACCCCATTCTGTGAGCGGCGCTGCCTGCCTTTCTGCCCTGGCACAATGTCCAGGTTTGGCCACCAGGGGGCACTTGAAACCTGCCTTTCGGTGCCTGGTCGTCGTTCCCTGAAGTGA-------AAAGTTGCCCTTCCGGTTATTTCCCTTCCTGTTTGTCTGCTTCCTGGGCTGTGTGGCTGCATTATCGGATCTCAGAAGCTTATGAACTTTAAAAACGGTAATAAGCC-CTGCAAAAAC------CCCCTTTGTGCACGTTTTCAAAAATGTATTTAACATTCAAAA--------AGAATGTTATGACACTCACTGCCTCCACGAGTGAAAATGtgt--gtgcacgtgtgtgtgtgcgtgtgc----------------------------------------------atatatgtatgcatccgtgtgtg i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169102144 376 - 170955103 AAACCATG---TTCACCCCATTCTGTAAGCGGCGCTGCCTGCCTTTCTGCCCTGGCACAATGTCCAGGTTTGGCCACCAGGGGGCACTTGAAACCTGCCTTTCGGTGCCTGGTCGTCGTTCCCTGAAGTGA-------AAAGTTGCCCTTCCGGTTATTTCCCTTCCTGTTTGTCTGCTTCCTGGGCTGTGTGGCTGCATTATCGGATCTCAGAAGCTTATGAACTTTAAAAAGGGTAATAAGCC-CTGCAAAAAC------CCCCTTTGTGCACGTTTTCAAAAATGTATTTAACATTCAAAA--------AGAATGTTATGACACTCACTGCCTCCACGAGTGAAAAtgtgt--gtgcacgtgtgtgtgtgcgtgtgc----------------------------------------------atatatgtatgcatccgtgtgtg i macFas5.chr4 C 0 I 890 s papAnu2.chr4 163920826 370 + 165299245 AAACCACG---TTCACCCCATTCTGTAAGCGGCGCTGCCTGCCTTTCTGCCCTGGCACAATGTCCAGGTTTGGCCACCAGGGGGCACTTGAAACCTGCCTTTCGGTGCCTGGTCGTCGTTCCCTGAAGTGA-------AAAGTTGCCCTTCCGGTTATTTCCCTTCCTGTTTGTCTGCTTCCTGGGGTGTGTGGCTGCATTATCGGATCTCAGAAGCTTATGAACTTTAAAAAGGGTAATAAGCC-CTGCCAAAGC------CCCGTTTGTGCAcgttttcaaaaatgtatttaacatcCAAAA--------AGAATGTTATGA----CACTGCCTCCACGAGTGAaaatgtgt--gtgcac--gtgtgtgtgcatgtgc----------------------------------------------atatatgtatgcatccgtgtgtg i papAnu2.chr4 C 0 I 6 s chlSab2.chr13 96706859 374 + 98384682 AAACCACG---TTCGCCCCATTCTGTAAGCGGCGCTGCCTGCCTTTCTGCCCTGGCACAATGTCCAGGTTTGGCCACCAGGGGGCACTTGAAACCTGCCTTTCGGTGCCTGGTCGTCGTTCCCTGAAGTGA-------AAAGTTGCCCTTCCGGTTATTTCCCTTCCTGTTTGTCTGCTTCCTGGGATGTGTGGCTGCATTATCAGAACTCGGAAGCTTATGAACTTTAAAAAGGGCAATAAGCC-CTGCAAAAAT------CCCCTTTGTGCACGTTTTCAAAAATGTATTTAACATCCAAAA--------AGAATGTTATGACACTCACTGCCTCCACGAGTGAAAAtgtgg--gtgcac--gtgtgtgtgcatgtgc----------------------------------------------atatatgtatgcatccgtgtgtg i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169914824 370 + 171630274 AAACCA-G---T--------GTCTGTAAGCGCC--CGCCTTCCTTTCTGCC--------ATATCCAGGCGTGGCCACCAGGGGGTGCTGGAAACCCGCCTTTCGGCGCCTGGTTGTC-TTCCCTGGGGTGA-------ACAGTTGCCCTTCCAGTTTTTTCTGTTCCTGTTTTTCTGCTTTCCAGGGTGTGTGGCTTCCTGATCAGCTCTCAGAAG-AGACCAGCTTTAAAAACGGTAATAAGCC-CTGTGAAAAG------CCCCT-CGTGCACGTTTTC-AAAATGTATTTAACATCCGAAA--------ATAATGTTGTGGCACTCCCTGCCT---CGAGTGAAAATATGTGAGTGCACCtgtgtgtgtgagcatgt----------------------------gtgtctgtgtgtgcatgcgtgtatgtgtacatgcgtgtgtg i calJac3.chr4 C 0 I 35 s canFam3.chr1 56194834 326 + 122678785 ----CAGGGGTTTGGCCTCCTGCTGTG-GCAGGGCCACCATCCG------CCTGGTGCAATGGCCATGCTGGTCCACGCGAGGGCACCACACACCAGCATTTCGGGGCATG--CAGTGTTCTCAGCAGAGGTCGGATTAGAGTTGCTCTTCCAATTGTCTCAGTT--GGTCTGTTTGCTTCTCCGGGTGC----TTTCACTGATATATTCAAGAAACATACAAAGTGATAAAAGGCAAACAGGATGCTACAATAACAATAATCTCCTTTACATACGCTG--AAAAATG-ATTTGCCGTCCAAAA--------GGGATCTGATGAAGTCCATGATCTCT----GTGCCAA-GTGT--GTGCACA-------------------------------------------------------------------------------------- i canFam3.chr1 C 0 C 0 a score=18135.000000 s hg38.chr6_KB021644v2_alt 129678 11 + 185823 tgt----atgtatgt s panTro4.chr6 170717488 15 + 172623881 tgtatgcatgtatgt i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172470925 8 + 174210431 -------atgtatgt i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156331539 15 + 157873769 tgtgtgcatgtatgt i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168148067 11 + 169853907 ----tgcatgtgtgt i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169103410 11 - 170955103 ----tgtgtgtatgt i macFas5.chr4 I 890 C 0 s papAnu2.chr4 163921202 11 + 165299245 ----tgcatatatgt i papAnu2.chr4 I 6 C 0 s chlSab2.chr13 96707233 11 + 98384682 ----tgcatgcatgt i chlSab2.chr13 C 0 I 568 s calJac3.chr4 169915229 11 + 171630274 ----tgtctgtgtgt i calJac3.chr4 I 35 I 2 e canFam3.chr1 56195160 0 + 122678785 C a score=7896.000000 s hg38.chr6_KB021644v2_alt 129689 3 + 185823 atg s panTro4.chr6 170717503 3 + 172623881 atg i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172470933 3 + 174210431 atg i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156331554 3 + 157873769 atg i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168148078 3 + 169853907 atg i rheMac3.chr4 C 0 I 564 s macFas5.chr4 169103421 3 - 170955103 atg i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163921213 3 + 165299245 atg i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169915242 3 + 171630274 atg i calJac3.chr4 I 2 I 26 e canFam3.chr1 56195160 0 + 122678785 C e chlSab2.chr13 96707244 568 + 98384682 I a score=46581.000000 s hg38.chr6_KB021644v2_alt 129692 84 + 185823 catctgtgtatgtgtgcatgca--------tgtgtgtgc--------gtctgtgtatgtatccatatg--------------------tgtgtgtatgtgtgtgcatgcatgtg----tgtgca s panTro4.chr6 170717506 88 + 172623881 catctgtgtatgtgtgcatgca--------tgtgtgtgc--------gtctgtgtatgtatccatatg--------------------tgtatgtgtgtgcatgcatgtgtgtgtgcatgtgtg i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172470936 70 + 174210431 cagctgtgtgtgtatg--------------tgtgtgtgc--------atgtaggtatgcattca--------------------------tgtgagtgtgcatgcatgtgtg------tgcgtg i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156331557 92 + 157873769 catctgtg--tgtgtgcatgca--------tgtgtgtg----------tgtatgtatgcatccatatgtgtgtg--------tgtggatgtgtgtgtgtgcatgcatgtgtgtg----catgtg i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169103424 88 - 170955103 catccgtg--tgtgtgcatgta--------tgtgtgtgcatatgtgtgtgtatgtatacagccatatg----------------------tgtgtgcgtctatgtgtgtgtgcg----tgtatc i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163921216 78 + 165299245 catccgtg--tgtgtgcatgcg--------tgtgtgtgc----------gcatgtatgcatccataag----------------------tgtgcatgtatgtgtgtgcatgcg----tgtatg i papAnu2.chr4 C 0 I 474 s calJac3.chr4 169915271 118 + 171630274 cgcatgtgtatgtgtgcatgcatgcatgtctgtgtgtgc--atgtgtgcctgtgtgttcatgcatgtgtgtgtgcatgtctctgtgtgtatgtgtgtgtgcatgtatatatgtg----tgtatg i calJac3.chr4 I 26 I 8 s canFam3.chr1 56195160 30 + 122678785 ------------CGTGCATGCA--------TGTGTGTGC----------CCACATACGGA---------------------------------------------------------------- i canFam3.chr1 C 0 C 0 e chlSab2.chr13 96707244 568 + 98384682 I e rheMac3.chr4 168148081 564 + 169853907 I a score=679205.000000 s hg38.chr6_KB021644v2_alt 129776 256 + 185823 tgtgtgtgcacgtgcatcgcttgcatgttttcttgtgtgtgcatatc----------tgtgtgtgtgtgtgtgtgtCCCGGATAAATAAGCCATCAACTAAGA-AGGAAACAGGCTGGCCTTTGTCTAGGGCCTGCCTTAC-----ATCTGCCGGAGTCCAAAGTCCACAATTCTTCCCTTTCGATTTCTGCCTTTTCCATAACTGGCACTGACCAGCAGAAACAGA-----AATGTGTTGTGAGGTCACCACCATCACCTTTCTGCTCATCCACAC- s panTro4.chr6 170717594 265 + 172623881 tgtgtgtgcacgtgcatcacgtgcatgttttcttgtgtgtgcatgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtCCCGGATAAATAAGCCATCAACTAAGA-AGGAAACAGGCTGGCCTTTGTCTAGGGCCTGCCTTAC-----ATCTGCCGGAGTCC-AAGTCCACAATTCTTCCCTTTCGATTTCTGCCTTTTCCATAACTGGCACTGACCAGCAGAAACAGA-----AATGTGTTGTGAGGTCACCACCATCACCTTTCTGCTCATCCACAC- i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172471006 246 + 174210431 tgtgtgtgcacgtgcatcgcgtgcatgttttcgtgtgcgtgcatgtc--------------------tgtgtgtgtCCCAGATACATAAGCCATCAACTAAGA-AGGAAACAGGCTAGCCCTTGTCTAGGGTTTGCCTTAC-----ATCTGCCGGAGTCCAAAGCCCACAATTCTTCCCTTTCGATTTCTGCCTTTTCCGTAACTGGCACCGACCAGCAGAAACAGA-----AATGTGTTGTGAGGTCACCACCATCACCTTTCTGCTCATCCACGT- i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156331649 252 + 157873769 tgtgcacacacgtgcatcacgtgcatgttttcgtgtgcgtgcatgtc----------tgtgtgtgtatgtgtgtgtCCCAG----ATAAGCCATCAACTAAGA-AGGAAATAGGCTGGCCTTTGTCTAGGGCCTGCCTTAC-----GTCTGCCGGAGTCCAAAGCCCACAATTCTTCCCTTTCGATTTCTGCCTTTTCTGTAACTGGCACCGACCAGCAGAAACAGA-----AATGTGTTGTGAGGTCACCACCATCACCTTTCTGCTCGTCCACAC- i nomLeu3.chr3 C 0 M 279 s rheMac3.chr4 168148645 252 + 169853907 tgtgtgtACACGTGCATAGCGTGCATGCTTTTGTGTGCTTGCATGTC----------TGTGTGTGTGTATGTGAGTCCCAG----ATAAGCCATCAACTAAGA-AGAAAACAGGCTGGCCGTTGTCTAGGGCCTGCCTTAT-----ATCTGCCAGAGTCCAGAGCCCATAATTCTTCCCTTTAGATTTCTGCCTTTTCCACAACTGGCACTGACCAGCAGAAACAGA-----AATGTGTTGTTAGGTCACCACCATCACCTTTCTGCTCGTCCACGT- i rheMac3.chr4 I 564 C 0 s macFas5.chr4 169103512 252 - 170955103 tgtgtgtacacgtgcatagcgtgcatgtttttgtgtgcttgcatgtc----------tgtgtgtgtgtatgtgtgtCCCAG----ATAAGCCATCAACTAAGA-AGAAAACAGGCTGGCCGTTGTCTAGGGCCTGCCTTAT-----ATCTGCCAGAGTCCAGAGCCCATAATTCTTCCCTTTAGATTTCTGCCTTTTCCACAACTGGCACTGACCAGCAGAAACAGA-----AATGTGTTGTTAGGTCACCACCATCACCTTTCTGCTCGTCCACGC- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163921768 254 + 165299245 tgtgtgtacacatacatagcacgcatgtttttgtgtgcttgcgtgtc--------tgtgtgtgtgtgtatgtgtgtcccaG----ATAAGCCATCAACTAAGA-AGAAAACAGGCTGGCCGTTGTCTAGGGCCTGCCTTAT-----ATCTGCCAGAGTCCAAAGCCCATAATTCTTCCCTTTAGATTTCTGCCTTTTCCACAACTGGCACTGACCAGCAGaaacaga-----aatgtgttgttaggtcACCACCATCACCTTTCTGCTCGTCCACGC- i papAnu2.chr4 I 474 C 0 s chlSab2.chr13 96707812 252 + 98384682 tgtgtgtacacatgcatagcgcacatgtttttgtgtgcttgcatgtc----------tgtatgtgtgtatgtgtgtCCCAG----ATAAGCCCTCAACTAAGA-AGAAAACAGGCTGGCCTTTGTCTAGGGCCTGCCTTAT-----ATCTGCCAGAGTCCAAAACCCATAATTCTTCCCTTTAGATTTCTGCCTTTTCCGCAACTGGCACCGACCAGCAGAAACAGA-----AATGTGTTGTTAGGTCACCACCATCACCTTTCTGCGGGTCCACGC- i chlSab2.chr13 I 568 C 0 s calJac3.chr4 169915397 261 + 171630274 tatgtgtgtTTGCATATGGCATGCATGTTTTCCtgtgcatgcatgtctgcatgtgtctttgtgtgtgtgtgtgtgtCCTAGATGCATAAGCCATCAACCAGGA--------AGGCTGGCGTTTGTCTAGGGCCTGCCTTAC---CTCTCTGCAGGTGTCGAAAGCCCACAATTCTTCCCTTTAGGTTCCTGCCTTTTCCATGACTGGCACCAGCCAGCAGAAACAAA-----AATGTGCTGTTATCTCACCGCCACCACCTTTCTGCTTGTCCACAC- i calJac3.chr4 I 8 C 0 s canFam3.chr1 56195190 155 + 122678785 --------------------------------------------------------------------------------------------ACCTGTGAGGAAAGGAAGCAGGCTGGCATTTCTGCAGGGCCTGACTTGCGGCTGGTCTGCTGGCCTCTGAAA---------------------------CCTTTTCTGTAACAGG----GACGAGCAGATCCAAAATTACACTGCGCTGTTAGAGCAAAACCATGACATTTCTGCTTGTCAACAAC i canFam3.chr1 C 0 C 0 a score=414529.000000 s hg38.chr6_KB021644v2_alt 130032 212 + 185823 GTGTGCTGGGGTCTGCTGCCGGCAGCGGTGTGGCAGGACTCGGCGGTCTCTTGTGCAGGT------CTGCGTC------TCAGATGAATGAggatgaagttttgattagatgccctctccgttccctgaaactctggaattctAGGCCTGTCTCTTTTTcctgcttccttccctcccttcctgctttcttctcttccttctttcttttctctccccatcccacc s panTro4.chr6 170717859 212 + 172623881 GTGTGCTGGGGTCTGCTGCCGGCAGCGGTGTGGCAGGACTCGGAGGTCTCTTGTGCAGGC------CTGCGTC------TCAGATGAATGAggatgaagttttgattagatgccctctccgttccctgaaactctggaattctAGGCCTGTCTCTTTttcctgcttccttccctcccttcctgctttcttctcttccttctttcttttctctccccatcccacc i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172471252 209 + 174210431 GTGTACCGGGGTCTGCTGCCGGCAACGGTGTGGCAGGACTCGGTGGTCTCTTGTGCAGGT------CTGCGTC------TCAGATGAACGAggatgaagttttgattagatgccctctccattccctgaaactctggaattctaGGCCTGTCTATTcttccttcttccttccctcccttcctgctttcttctctttcttct---ttttctctccccatcccacc i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168148897 201 + 169853907 GTATGTTAGGTTCTGCTGCTGGCAGTGGTGTGGCAGGACGGGGCTGTCACTTGTGCAGGT------CTGCGTC------TCAGATGAACGAGGGTGAAGTTTTGATTAGGTGCCCTCTCCATTCCCTGAAACTCTGGAATTCTAGGCCTGtctcttccttct-----------tccctccctgcttgcttctctcccttctttcttttctctccccatcccacc i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169103764 201 - 170955103 GTATGTTAGGGTCTGCTGCTGGCAGTGGTGTGGCAGGACGGGGCCGTCACTTGTGCAGGT------CTGCGTC------TCAGATGAACGAGGGTGAAGTTTTGATTAGGTGCCCTCTCCATTCCCTGAAACTCTGGAATTCTAGGCCTGTCTcttccttct-----------tccctccctgcttgcttctctcccttctttcttttctctccCCATCCCACC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163922022 201 + 165299245 GTATGTTAGGGTCTGCTGCTGGCAGTGGTGTGGAAGGACAGGGCCGTCACTTGTGCGGGT------CTGCGTC------TCAGATGAACGAGGGTGAAGTTTTGATTAGGTGCCCTCTCCATTCCCTGACACTCTGGAATTCTAGGCctgtctcttccttct-----------tccctccctgctttcttctctaccttctttcttttctctccccatcccacc i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96708064 201 + 98384682 GTATGTTAGGGTCTGCTGCTGGCAGTGGTGTGGCAGGATGGGGCCGTCACTTGTGCAGGT------CTGCGTC------TCAGATGAACGAGGGTGAAGTTCTGATTAGGTGCCCTCTCCATTCCCTGAAACTCTGGAATTCTAGGCCTGTCtcttccttct-----------tccctccctgctttcttctctcccttcttacttttcTCTCCCCATCCCACC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169915658 204 + 171630274 GTGTGTTCAGCTCGGCTGCTGGCAGTGCTGTGGCAGGGCAGGGCGGTCACTTATGCAGGT------CTGCGTCTCCTTATCGGATGAATGAGGACAAAGCTTTGCTCCGATGCCCTCTCAGTTCCCTGAAA--CTGGAAATC---GCTTGTTTCTTcttcct----ccctccctcccttcctcctttcttcactcccttcttcctcctctctccccatc----- i calJac3.chr4 C 0 C 0 s canFam3.chr1 56195345 128 + 122678785 ATATATCCTGAT------------------------------GCAATTACTTATACAAGTGTGCCCTTGCTTC------TCTGATGAG-------GAAGTTTGAATCATGTTC-------------------TCTGGAATTCCAGGCCTGCCTC---------------------------------CCCCACTCCCTTCCTCCCTAGCTGCCTTCACCACAC- i canFam3.chr1 C 0 C 0 e nomLeu3.chr3 156331901 279 + 157873769 M a score=500803.000000 s hg38.chr6_KB021644v2_alt 130244 182 + 185823 ctcccttttccctttttctcccccatccctttactccctAAATGAGTGTCTGAGGGGCCGACCACAGTGCCGTG----CTGTGTCCTCTGCGAGTGTGTATTCAGAACTACAAGAAATCACTTTGTTCCTTC---TCCTGTGTACTCACGGAACTTGATTCTTGCCCTGAGAAGAAGGCAGG---AACCGGA s panTro4.chr6 170718071 182 + 172623881 ctcccttttccctttttctcccccatccctttactccctAAATGAGTGTCTGAGGGGCCGACCACAGTGCCGTG----CTGTGTCCTTAGGGAGTGTGTATTCAGAACTACAAGAAATCACTCTGTTCCTTC---TCCTGTGTACTCACGGGACTTGATTCTTGCCCTGAGAAGAAGGCAGG---AACCGGA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172471461 183 + 174210431 ctcccttttccctttttcttccccgtccctttactccctAAATAAGTATCTGAGGTGCCGATCACAATGCTGTGCTCTCTGTGTCCTTTGGGAGCGTGTATTCAGAACTAGAAGAAATCACTCCGTTCCTTC---TCCTGCGTACTCACAGACCTTGATTCTTGCCATG---AGAAGGCAGG---AACTGGA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156332180 186 + 157873769 CTCCCTTTTCCCTTTTTCTCCCCCGTCCCTTTACTCCCTACATAATTATCTGAGGTGCTGACCGCATTGCCGTACTCTCTGTGTCCTTTGGAATGGTGTATTCTGAACTATACTAAATCACTCCGTCCCTTC---TCCTGCTTACTCACGGGCCTTGATTCCTGCCATGGGAAGAAGGACCG---AACTGGA i nomLeu3.chr3 M 279 C 0 s rheMac3.chr4 168149098 184 + 169853907 atcccttttccctttttctcccccttccctttactccctAAATAAGTGTCTGAGGTACTGACCACAACACCATGCTCCCTGTGTCCTTTGGGA--ATGTATTCAGAACTACAAGAAATCACTCCGTTCCTTC---TCCTGCGTACTCACTGGCCTTGATTCTTGCCATGGGAAGAAGGAAGG---AACTGGA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169103965 184 - 170955103 ATCCCTTTTCCCTTTTTCTCCCCCTTCCCTTTACTCCCTAAATAAGTGTCTGAGGTACCGACCACAACACCATGCTCCCTGTGTCCTTTGGGA--GTGTATTCAGAACTACAAGAAATCACTCCGTTCCTTC---TCCTGCGTGCTCACTGGCCTTGATTCTTGCCATGGGAAGAAGGAAGG---AACTGGA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163922223 184 + 165299245 atcccttttccctttttctcccccttccctttactccctAAATAAGTGTCTGAGGTACTGACCACAACATCATGCTCTCTGTGTCCTTTGGGA--GTGTATTCAGAACTACAAGAAATCACTCCGTTCCTTC---TCCTGCATGCTCACTGGCCTTGATTCTTGCCATGGGAAGAAGGCAGG---AACTGGA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96708265 184 + 98384682 ATCCCTTTTCCCTTTTTCTCCCCCTTCCCTTTACTCCCTAAATAAGTATCTGAGGTACCGACCACAACACCATGCTCCCTGTGTCCTTTGGGA--GTGTATTCAGAACTACAAGAAATCACTCCATTCCTTC---TCCTGTGTGCTCACTGGCCTTGATTCTTGCCATGGGAAGAAGGCAGG---AACTGGA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169915862 183 + 171630274 cTCCTTTTCCTCTTTTTCTCCCCAATCCCTTTACTCTCTGAATAAGTAATTGAGGTGCCAACCACAG-GCTGAGCACTCTGTGTCCTTCGGGAGTGTGTCTTCAGAACTGTGAGAAATCACT--GTTCCTTC---TCCTGCACAGTCATGGGCCTTGACACTTGCCATGGGAAGAAGGTCGG---AACTGGA i calJac3.chr4 C 0 I 137 s canFam3.chr1 56195473 156 + 122678785 -----------------------------------CCCCAAGTAGGTATCTGAGGCACCTGACACAACGACTTGCCATCAGCATCCTTCGGGAGTATGTATCCACACCTACAAGAGAGCAGCCCATTCCCTCTTGTCCTGTGTCCCCATCAGCCTGGCCTCTTCCTGTGATGAGAAGGTGGGTGCATCTGA- i canFam3.chr1 C 0 C 0 a score=1016080.000000 s hg38.chr6_KB021644v2_alt 130426 355 + 185823 --CACCTCCATCACCCTCTCTTTTT-ACACTTTCCAACGTCAGGACAGCACCCTTCCCTCCACTCCCACCTTCAGACTCTCAGAGGAACAGGCCATCTTCAGCTTGCGTT--AGAACCTCTCCTCTACAGCCAGGACCCAGGTGTTTTCACACATTCC-CCAGGGTTTTCTCTCC--AATCAGCTTTGCGCCCCATCC-CTCATGTTCACATTC-CATTTAGAGAGGAAGCTGCACTGGCCCTGAGCCCCGCATTGCCTGGTGTTTCCCATCACTGCT-------------------CCACTGACCTTCCTGTCTCCTGCCGGGACGGTGGCTGTGGCCCC----CGAAGCTGGGCTCCTGCCTTCC-CTTG------------CCCCCCACACCCTCCTC s panTro4.chr6 170718253 355 + 172623881 --CACCTCCATCACCCTCTCTTTTT-AAACTTTCCAACGTCAGGACAGCACCCTTCCCTCCACTCCCACCTTCAGACTCTCAGAGGAACAGGCCATCTTCACCTTGCGTT--AGAACCTCTCCTCTGCAGCCAGGACCCAGGTGTCTTCACACATTCC-CCAGGGTTTTCTCTCC--ACGCGGCTTTGCGCCCCATCC-CTCATGTTCACATTC-CATTTAGAGAGGAAGCTGCACTGGCCCTGAGCCCCGCATTGCCTGGTGTTTCCCATCACTGCT-------------------CCACTGACCTTCCTGTCTCCTGCCGAGACGGTGGCTGTGGCCCC----CGAAGCTGGGCTCCTGCCTTCC-CTTG------------CCCCCTACACCCTCCTC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172471644 355 + 174210431 --CACCTCCATCACCCTCTCTTTTC-AAACTTTCCAGCGTCAGAACAGCACCCTTCCCTCCAGTCCCACCTTCAGACTCTCAGAGGAAGAGGCAATCTTCACCTTGCGTT--AAAACCTCTCCTCTGCAGCCAGGACCCAGGTGTCTTCATACGTTCC-CCAGGGTTTTCTCTCC--ACTCTGCTTTGCGCCCCATCC-CTCATGCTCACGTTC-CATTTAGAGAGGAAGCTGCACTGGCCCTGAGCCCCGCATTGCCTCGTGTTTCCCATCACTCCT-------------------CCACTGACCTTCCTGTCTCCTGCCGAGATGGTGGCTGTGGCCCC----CAAACCTGGGCTCCTGCCTTCC-CTTG------------CTCCCCACACCCTCCTC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156332366 354 + 157873769 --CACCTCCATCACCCTCTCTTTTT-AAACTTTCCAACGTCAGGACAGCACCCTTCCCTCCACTCCCACCTTCAGACTCTCAGAGGAAGAGGCAATCTTCACCTCGCGTT--AGAACCTCTCCTCTGCAGCCAGGACCCAGGTGTCTTCACAC-TTCC-CCAGGTTTTTCTCTCC--ACTCGGCTTTGCACCCCATCC-CTCACCTTCATGTTC-CGTTTAGAGAGGAAGCCACACTGGCCACGAGCCCCGCATTGCCTGGTGTTTCCCATCACTGCT-------------------CCACTGACCTTCCTGTTTCCTGCTGAGATGGTGGCTGTGGCCCC----CGAAGCTAGGCTCCTGCCTTCC-CTTG------------CCCCCCACACCCTCCTC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168149282 359 + 169853907 --CACCTCCATCATCCTCTCTTTTT-AAACTTTCCAACGTCAGGACAGCACCCTTCCCTCCACTCTCACCTTCAGACTCTCAGAGGAAGA-GTTATCTTCACCTCGCGTT--AGAACCTCTTCTCTGCAGCCAGGACCCGGGCATCTTCACATGTCCC-CCAGAGTTTTCTTTCC--ACTCGACTTTGCGCCTCATCC-CTCATGTTCACGTTC-CATTTAGAGAGGAAGCCACACTGGCCCTGAGCCCCACATTGCTTGGTGTGTCCCATCACTGCT-------------------CCACTGATCTTCCTGTCTCCTGCTGAGACAGTGG-TGTGGCCCC----CGAAGCTGGGCTCCTGCCTTCC-CTTG------CCCCGCCCCCACACACCCTCCTT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169104149 359 - 170955103 --CACCTCCATCATCCTCTCTTTTT-AAACTTTCCAACGTCAGGACAGCACCCTTCCCTCCACTCTCACCTTCAGACTCTCAGAGGAAGA-GTTATCTTCACCTCGCGTT--AGAACCTCTTCTCTGCAGCCAGGACCCGGGCATCTTCACATGTCCC-CCAGAGTTTTCTTTCC--ACTCGACTTTGCGCCTCATCC-CTCATGTTCACGTTC-CATTTAGAGAGGAAGCCACACTGGCCCTGAGCCCCACATTGCTTGGTGTGTCCCATCACTGCT-------------------CCACTGATCTTCCTGTCTCCTGCTGAGACAGTGG-TGTGGCCCC----CGAAGCTGGGCTCCTGCCTTCC-CTTG------CCCCGCCCCCACACACCCTCCTT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163922407 357 + 165299245 --CACCTCCATCA--CCCTCTTTTC-AAACTTTCCAACGTCAGAACAGCACCCTTCCCTCCACTCTCACCTTCAGACTCTCAGAGGAAGA-GTTATCTTCACCTCGCGTT--AGAACCTCTTCTCTGCAGCCAGGACCCGGGTGTCTGCACATGTCCC-CCAGAGTTTTCTTTCC--ACTCGACTTTGCGCCCCATCC-CTCATGTTCACATTC-CATTTAGAGAGGAAGCCACACTGGCCCTGAGCCCCACATTGCTTGGTGTGTCCCATCACTGCT-------------------CCACTGACCTTCCTGTCTCCTGCTGAGACAGTGG-TGTGGCCCC----CGAAGCTGGGCTCCTGCCTTCC-CTTG------CCCTGCCCCCGCACACCCTCCTT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96708449 359 + 98384682 --CACCTCCATCACCCTCTCTTTTT-AAACTTTCCAACGTCAGGACAGCACCCTTCCCTCCACTCTCACCTTCAGACTCTCAGAGGAAGA-GTCATCTTCACCTTGCGTT--AGAACCTCTTCTCTGCAGCCAGGACCCGGGTGTCTTCACATGTCCC-CCAGAGTTTTCTTTCC--ACTCGACTTTGCGCCCCGTCC-CTCATGTTCACGTTC-CACTTCGAGAGGAAGCCGCACTGGCCCTGAGCCCCGCATTGCTTGGTATGTCCCATCACTGCT-------------------CCACTGACCTTCCTGTCTCCTGCCGAGACAGGGG-TGTGGCCCC----TGAAGCTGGGCTCCTGCCTTCC-ATTG------CCCCACCCCCCCACACCCTCCTC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169916182 350 + 171630274 --cacctctatcacctTTTCTTTTTAAAACTTGTTAATGTCAGGACCGCACCTGTTCCTCGACTTCCACCTTTGGACTCTCAAG-------GCAGTCATCGCCTCCCACTGCAGAATGTCTCCTCTGCAGCCAGGACCCAGGTGTCTTCCCACATCCC-CAAGGGTCTCCTCTCC--GCTCGCCTTTGTGCCCCATTC-TTCATGTTTGTGTTC-TGTTTAGAGAGGAAGCCTCGCTGGCCCTGAGCCCCG-GTGGCCCAGTGTGTCCCATCACTGCT-------------------CCGCTGGCCTTCCTGTCTCCTGCCGAGACCGTGGCTATGGCTCC----CGGAGCTGGGCTCCTGCCTCCA-CTTG------------CCCCCCACACCCTCCTT i calJac3.chr4 I 137 C 0 s canFam3.chr1 56195629 360 + 122678785 CACATCTACATAATCAC--CTTTCT-GATCCTTCACCTGCCACGACAGCACC--TCCCTCTGTTCTC-CTTCCACACCCCCATGAGGAAA---------------GGGCT-------------TCTGCAGCCAGGATCCA-ACATCTACAAACATTCCGCCAAGATTTTCTCTTCTTGCTTCACTTTGCACTTTTCCTGTTCATTTTCATTTTCACATCCAAAGAGAAAGTCTCATTAATTCTAAATTCC-CGTTCCTTGATGTGTGCCACAACTGCTGTATTAGACTCAGTCCTTGCCCCTGTCCCCTCTGCCCCCCACTTTGACTGC-----TGGTCCCGCTGTGTAACTGGTGTCCTACTTCCAGCTTGGACATATTCATACCATCCACACTCTCCTC i canFam3.chr1 C 0 I 1095 a score=483769.000000 s hg38.chr6_KB021644v2_alt 130781 168 + 185823 GAGGCTCCAAGAGTGACAGGCTGTGGGCAGCCTCAGTCCTCTCCCCTCTCCATCTGCTTTCAACCAGGAATTAATTCGAGCAGGAACACCGCAGTGAACCCTTCCTGGCAGAATAGGACTGTGGTGTTGAAGGCAAGGCTCAACCACCCT----CCACCAGCCTGGCTGAAG s panTro4.chr6 170718608 168 + 172623881 GAGGCTCCAAGAGTGACAGGCTGTGGGCAGCCTCAGTCCTCTCCCCTCTCCATCTGCTTTCAACCAGGAATTAATTCGAGCAGGAACACCGCAGTGAACCCTTCCTGGCAGAATAGGACTGTGGTGTTGAAGATGAGGCTCAACCACCCT----CCACCAGCCTGGCTGAAG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172471999 168 + 174210431 GAGGCTCCAAGAGTGATAGGCTGTGGGCAGCCTCAGTCCTCTCCCTTCTCCATCTGCTTTCAATCAGGAACTGATTCAGGCAGGAACACCGCAGTGAACCCTTCCTGGCAGGACAGGACTGTGGTGTTGAAGACAAGGCTCAACCACCCT----CCACCAGCCTGGCTGAAG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156332720 168 + 157873769 GAGGCTCCAAGAGTGAGAGGCTGTGGGCAGCCTCAGTCCTCTCCCTTCTCCATCTGCTTTCAACCAGGAACTAACTCGGGCAGGAACACCGCAGTGAACCCTTCCTGGCAGGACAGGACTGTGGTGTTGAAGACAAGGCTCAACCACCCT----CCACCAGCCTGGCTGAAG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168149641 168 + 169853907 GAGGCTCCAAGAGTAAGAGGCTGTGGGCAGCCTCAGTCCTCTCCCATCTCCATCTGCTTTCAACCAGGAACTAATTCAGGCAGGGGCACCACAGTGAACCCTTCCTGGCAGGACAGAACTCTGGTGTTGAAGACGAGGCACAACCACCCT----CCACCAGCCTGGCTGAAG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169104508 168 - 170955103 GAGGCTCCAAGAGTGAGAGGCTGTGGGCAGCCTCAGTCCTCTCCCATCTCCATCTGCTTTCAACCAGGAACTAATTCAGGCAGGGGCACCGCAGTGAACCCTTCCTGGCAGGACAGAACTCTGGTGTTGAAGACGAGACACAACCACCCT----CCACCAGCCTGGCTGAAG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163922764 168 + 165299245 GAGGCTCCAAGAGTGAGAGGCTATGGGCAGCCTCAGTCCTCTCCCATCTCCATCTGCTTTCAACCAGGAACTAATTCAGGCAGGGGCACCGCAGTGAACCCTTCCTGGCAGGACAGAACTCTGGTGTTGAAGACGAGGCACAACCACCCT----CCACCAGCCTGGCTGAAG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96708808 162 + 98384682 GAAGCTCCAAGAGTGAGAGGCTGTGGGCAGCCTCAGTCCCCTCCCATCTCCATCTGCTTTCAACCAGGAACTAATTCAGGCAGGGGCACCGCAGTGAACCCTTCCTGGCAAGACGA-----TGTTGTTGAAGACGAGGCACAACCACCCT----CC-CCAGCCTGGCTGAAG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169916532 170 + 171630274 GAGGCACCAAGAGTG-CAGGCTGTGGGCAGCCTCAGTCCACTCCCCTTTCTGTCTGCTTTCAGCCAGGAACTAAGCCGAGCAGGGGCCCCGTGGTGAACCCTCCCTGGCAGGACGGGACTCTGGTACTGAGGAT-AGGCGCAGCCACCCTGCACCCACCAGCCTGGCTGAAG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56195989 1095 + 122678785 I a score=1523843.000000 s hg38.chr6_KB021644v2_alt 130949 516 + 185823 TTTTTGCAGAACCATGCT-GCCCTC-------CGGGTCCCTTCCCCCAGTCCTTCTCCCTCCCCAGGAGC----------------CTGAAGCTCTCCCCAGCTTCTTGTG----CTCTCCAACAAGTCCCTT-GAAAAAACTGAtcccatatttcaatttgttatgaatctatgtttctttatgtctcagagcatactattaacacttgctttaaaggaatagtgtactaattacaacatggaggtcggtctccactgac--acttttcttctgggattgggtcctatttttctgtttcctcggttgaagattgtaaaggttttgccactgtcctggacactg---aaggtcacgtgttcagattctgggttctgttgtattcctccaaacagtgctcagctgtgtcattgctgttgttggtagagcggacactcacttgactggaagcaaactgcaggctctgtctttggacagcaggtcaaatctcaattcagacctttcatctctagctgggc-tgctggaggtgtgtcttgcatatgcacagttca s panTro4.chr6 170718776 516 + 172623881 TTTTTGCAGAACCATGCT-GCCCTC-------CGGGTCCCTTCCCCCGATCCTTCTCCCTCACCAGGAGC----------------CTGAAGCTCTCCCCAGCTTCTTGTG----CTCTCCAGCAAGTCCCTT-GAAAAACCTGAtcccatatttcaatttgttatgaatctatgtttctttatgtctcagagcatactattaacacttgctttaaaggaatagtgtactaattacaacatggaggtcagtctccactgac--acttttcttctgggattgggtcctatttttctgtttcctcggttgaaggttgtaaaggttttgccactgtcctggacactg---aaggtcacgtgttcagactctgggttctgttgtattcctccgaacagtgctcagctgtgtcattgctgttgttggtagagtggacactcacttgactggaagaaaactgcaggctctgtctttggacagcaggtcaaatctcaattcagacctttcatctctagctgggc-tgctggaggtgtgtcttgcatatgcacagttca i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172472167 522 + 174210431 TTTCTGCAGAACCATGCT-GCCCTC-------CGGGTCCCTTCCCCTGATCCTTCTCCCTCCCCAGGAGC----------------CTGAAGCTCTCCCCAGCTTCTTGTGCTCTCTCTCCAACAAGTCCCTT-GAAAAAACTGAtcccatgtttcaatttgttatgaatctatgtgtctttatgtctcagagcatactattaacacttgctttaaaggaatagtgtacaaattacaacatggaggttggtctccactgactgacttttcttctgagattgggtcctatttttctgtttccttggttgaacgttgtaaaggttttgccactgtcctggacactg---aaggtcatgtgttcagactttgggttctgttgtattcctccgaacagtgcccagctgtgttgttgctgttgttggtagagcggacactcacttgattggaagcaaagtgcaggctctgtctttggacagcaggtcaaatctcaattcagacctttcaactctagctgggc-tgctggaggtgtgtcttgcatatgcacagttca i ponAbe2.chr6 C 0 I 925 s nomLeu3.chr3 156332888 522 + 157873769 TTTCTGCAGAACCATGCT-GCCCTC-------CGGGTCCCTTCCCCCAATCCTTCTCCCTCCCCAGGAGC----------------CTGAAGCTCTCTACAGCTTCTTGTGCTCTCTCTCCAACAAGTCCCTT-GAAAAAACTGAtcccatatttcagtttgttatgaatctatgtttctttatgtcacagagcatactattaacacttgctttaaaggaatagtgtactaattacaacatggaggtcggtctccactgactggtttttcttctgggattgggtcctatttttctgtttctttggttgaaggttgtaaaggttttgccactgtcctggacactg---aaggtcatgtgttcagactctgggttctgttgtattcctccaaacagcgctcagctgtgtcattgctgtcgttggtagagtggacactcacttgactggaagcaaactgcaggctctgtctttggacagcaggtcaaatctcaattcagacctttcatctctagctgggc-tgctggaggtgtgtcttgcatatgcacagttca i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168149809 515 + 169853907 CTTCTGCAGAACCGTGCT-GCCCTC-------CGGGTCCCTTCTCCCGATCCTTCTCCCTCCCCAGGAGC----------------CTGAAGCTCTCCCCAGCTTCTTGTGCTCTCTCTCCAATAAGTCCCTTGGAAAAAACTGAtcccatgtttccatttgttatgaatctgcgtttctttatgtcacagagcttactattaacacttgctttaaaggaatagtgtactaattacaacatggaggtcagtctccactgattgacttttcttctgggattgggtcctttttttctgtttcctcggttgaaggttgtaaaggttttgccaccgtcctggacactg---acggtcatgtgttcagactctgggttctgttatattcctctgaacagtgctcagctgtgtcgttgctgttgttggtagagc-aacactcactagactggaagcaaactgcaggctttgtctttggacagcaggtcaaatctcaattcagacctttca-------ctgggc-tcctggaggtctatctggcatgtgcatgtttca i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169104676 515 - 170955103 CTTCTGCAGAACCGTGCT-GCCCTC-------CGGGTCCCTTCCCCCGATCCTTCTCCCTCCCCAGGAGC----------------CTGAAGCTCTCCCCAGCTTCTTGTGCTCTCTCTCCAATAAGTCCCTTGGAAAAAACTGAtcccatgtttcaatttgttatgaatctgcgtttctttatgtcacagagcttactattaacacttgctttaaaggaatagtgtactaattacaacatggaggtcagtctccactgattgacttttcttctgggattgggtcctttttttctgtttcctcggttgaaggttgtaaaggttttgccaccgtcctggacactg---acggtcgtgtgttcagactctgggttctgttatattcctccgaacagtgctcagctgtgtcgttgctgttgctggtagagc-aacactcactagactggaagcaaactgcaggctttgtctttggacagcaggtcaaatctcaattcagacctttca-------ctgggc-tcctggaggtctatctggcatgtgcatgtttca i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163922932 515 + 165299245 CTTCTGCAGAACTGTGCT-GCCCTC-------CGGGTCCCTTCCCCTGatccttctccctccccaggaGC----------------CTGAAGCTCTCCCCAGCTTCTTGTGCTCTCTCTCCAATAAGTCCCTTGGAAAAAACTGATCCCATATTTCAATTTGTTATGAATCTGTGTTACTTTATGTCACAGAGCTTACTATTAACACTTGCTTTAAAGGAATAGTGTACTAATTACAACATGGAGGTCGGTCTCCACTGACTGACTTTTCTTCTGGGATTGGGtcctatttttctgtttcctcggTTGAAGGTTGTAAAGGTTTTGCCACCGTCTTGGACACTG---ACGGTCGTGTGCTCAGACTCTGGGTTCTGTTATATTCCTCCGAACAGTGCTCAGCTGTGTCGTTGCTGTTGTTGGTAGAGC-AACACTCACTAGACTGGAAGCAAACTGTAGGCTTTGTCTTTGGACAGCAGGTCAAATCTCAATTCAGACCTTTCA-------CTGGGC-TCCTGGAGGTCTGTCTTGCATGTGCATGTTTCA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96708970 514 + 98384682 CTTCTGCAGAACCGTGCT-GCCCTC-------CGGGTCCCTTCCCCCGATCCTTCTCCCTCCCCAGGAGC----------------CTGAAGCTCTCCCCAGCTTCTTGTGCTCTCTCTCCAATAAGTCCCTTGGAAAAAACTGAtcccatgtttcaatttgttatgaatctgcgtttctttatgtcacagagcttactattagcacttgctttaaaggaatagtgtactaattacaacatggaggtccgtctccactgattgacttttcttctgggattgggtcctattattctgtttcctcggttgaaggttgtaaaggtttt-ccaccgtcctggacactg---accgtcatgtgttcagactctgggttctgttatattcctccaaacagtgctcagctgtgtccttgctgttggtggtagagc-aacactcactagactggaagcaaactgcaggctttgtctttggacaggaggtcaaatctcaattcagacctttca-------ctgggc-tcctggagatctgtcttgcatgtgcatgtttca i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169916702 508 + 171630274 CTTCGGCAGG--TGCGCT-GCCGTC-------CGGGTCCCTTCCCCCCATCCTTCTCCCTCCCCAGGAGC----------------CTGAAGCTCTCCCCAGCTTCTTGTGCTCTCTCTCCAATAAGTCCCT--GGAAAGTCTGACCCCATCATTCATTCTAACA-GAATCTGCATTTCTTCATGTTACGGAGCATGCTATTAACACTTGGTTTAAGGGAACCGTGTACCCATTACAGCATGGAGGTTGGCGTCTACTGACT-GCCTTTCTTCCGGGATTGGGCCCTGTGTTCCTGTTTCCTCAGCAGCAGGTTGTAAAGGTTTGGCCGCTGTCCTGGACGCTG---AGTGTCCTGCGCTCAGACTCGG------GTTACA-TACTCTGAACGGCTCTCCGCTGCGCGCTTGCC-TTGCTGGTGGAGAGGACACTCGCTCCActgg-agcaaaccgcaggctctggctttggatggcaggtccaggctcagctcagacctttcgtccctggctgggc-tgctgggcatccgtcttgcatttgcacggttca i calJac3.chr4 C 0 C 0 s canFam3.chr1 56197084 482 + 122678785 tcttgggagaaacagactggccctcttcctatccagtcttttcctct--tcttcctcctctcacgggatccagacatgtgttggttctgaaga-ctccccACCT---------CACCTTCCAATACATCTCTT-GCAACATCCCATCCCCCAtttcaattctttatggatatat-ttccactatgttactgaacatagtattaatacttgctttagagtcttagtct----------------gggtcagttcccactgact-gtctttttcttgagattgggtcatattatcctgtttcct----tgaaggttgtataaatttggattccttctt-gacattgtgaatattattttgttcagactctggattttgttatattcccccaaagagtgtt--------------ctgtggttgttacagc--atactaacttggttggaatcaag-tgcaagctctgtctctggatggcagctcaga--------------ttttgtccttagcttggctTGCCGTA--TCGGTCTTAATTATGCATGCTCCA i canFam3.chr1 I 1095 C 0 a score=3600.000000 s hg38.chr6_KB021644v2_alt 131465 1 + 185823 g s panTro4.chr6 170719292 1 + 172623881 g i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156333410 1 + 157873769 g i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168150324 1 + 169853907 g i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169105191 1 - 170955103 g i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163923447 1 + 165299245 G i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96709484 1 + 98384682 g i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169917210 1 + 171630274 g i calJac3.chr4 C 0 C 0 s canFam3.chr1 56197566 1 + 122678785 G i canFam3.chr1 C 0 C 0 e ponAbe2.chr6 172472689 925 + 174210431 I a score=287320.000000 s hg38.chr6_KB021644v2_alt 131466 107 + 185823 gggtcatcaggtattagggtagaatttatatacaagatgcgtggatgcccct------------------------------------------------------------------------------ctctgtctctttctccacagatttctccttaatgtctttgtgtctatggttaccc s panTro4.chr6 170719293 107 + 172623881 gggtcatcaggtattagggcagaatttatatacgaaacatgtggatgcccct------------------------------------------------------------------------------gtctgtctctttctccacagatttcttcttaatgtttttgtgtctatggttaccc i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172473614 107 + 174210431 gggtcatcaggtattagggcagaatttatatacaaaacgtgtgaatgcccct------------------------------------------------------------------------------ctctgtctctctttccccagatttctccttaatgtttttgtgtctatggttaccc i ponAbe2.chr6 I 925 C 0 s nomLeu3.chr3 156333411 105 + 157873769 gggtcatcaggtattagggcagaatttatatacaaaacatgtggatgcccc--------------------------------------------------------------------------------tctgtctctttttccccagatttctccttaacgtttttgtgtctatggttgccc i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168150325 107 + 169853907 gggtcatcaggtattagggcagaatttatacacaaaatgtgtggatgcccct------------------------------------------------------------------------------ctctgtctctttttccccagatttatactcaatgtttttgtgtctatggttgccc i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169105192 107 - 170955103 gggtcatcaggtattagggcagaatttatacacaaaatgtgtggatgcccct------------------------------------------------------------------------------ctctgtctctttttccccagatttatcctcaatgtttttgtgtctatggttgccc i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163923448 107 + 165299245 GGGTCATCAGGTATTAGGGCAGAATTTATACACAAAATGTGTGGATGcgcct------------------------------------------------------------------------------ctctgtctctttttccccAGATTTATCCTCAATGTTTTTGTGTCTATGGTTGCCC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96709485 107 + 98384682 gggtcatcaggtattagggcagaatttatacacaaaatgtgtggatgcccct------------------------------------------------------------------------------ctctgtctctttttccccagatttctcttcaatggttttgtgtctctggttgccc i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169917211 184 + 171630274 ggttcaccgggtgttagggcagaattcacacacaaaatgtgtgcaggcccctctgcctctctAATTCACACACAAAATGCGTGCACGCCCCTCTGCCTCTCTAATTCACACACAAAATGCATGCACGCCCCTCTGCCTCTTTTCCCTCAGATTTCTGCTTAATGCTTTTGTGTCTGT-GTTACCC i calJac3.chr4 C 0 I 253 s canFam3.chr1 56197567 75 + 122678785 --------ACATATTAGCACAGATTTTAC-------------GAATGctctc------------------------------------------------------------------------------ct-----------tcctaggatttctactcaatttccccatatctatggatgccc i canFam3.chr1 C 0 C 0 a score=2552.000000 s hg38.chr6_KB021644v2_alt 131573 1 + 185823 c s panTro4.chr6 170719400 1 + 172623881 c i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172473721 1 + 174210431 c i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156333516 1 + 157873769 c i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168150432 1 + 169853907 c i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169105299 1 - 170955103 c i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163923555 1 + 165299245 C i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96709592 1 + 98384682 c i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56197642 1 + 122678785 t i canFam3.chr1 C 0 C 0 e calJac3.chr4 169917395 253 + 171630274 I a score=63455.000000 s hg38.chr6_KB021644v2_alt 131574 25 + 185823 caattttaccctgcggtgttcttca s panTro4.chr6 170719401 25 + 172623881 caattttaccctgcgttgttcttca i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172473722 25 + 174210431 caattttaccctgtggtgttcttca i ponAbe2.chr6 C 0 I 1009 s nomLeu3.chr3 156333517 25 + 157873769 caattttaccctttggtgttcttca i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168150433 23 + 169853907 caattttaccctttg--gttcttca i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169105300 23 - 170955103 caattttaccctttg--gttcttca i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163923556 23 + 165299245 CAATTTTACCCTTTG--GTTCTTCA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96709593 23 + 98384682 caattttaccctttg--gttcttca i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169917648 23 + 171630274 cacttttactctctg--cgtcttca i calJac3.chr4 I 253 C 0 s canFam3.chr1 56197643 23 + 122678785 acattttaacttctg--gcttttca i canFam3.chr1 C 0 C 0 a score=612459.000000 s hg38.chr6_KB021644v2_alt 131599 247 + 185823 gatgagaaagactgcaggtt----acctactggagtttca-ctgccccacatggcctgctggagcctggccttggggtagaagctgtgaagctggtatattcactctgtgcca---actcctctcctccaagtgctaattccagcccagaaactgcctgctttGGAGCATGA-TGTAAACTTGGCCTCCCTTCATGCTACATACAGACCACGGAAATGGGACAACCACCCCAGg------gtgctctgggaccagcttgcat s panTro4.chr6 170719426 246 + 172623881 gatgagaaagactgcaggtt----accgactggagtttca-ctgccccacgtggcctgctggagcctggccttgggctagaagctgtgaagctggtatattcactcagtgcca---actcctctcctccaagtgctaattccggcccagaaactgcctgctttGGAGCATGA-TGTAAACTTGGCCTCCCTTCATGCTACATACAGGCCACGGAAATGGGACAACCACCCCAGG------GTGCTC-GGGACCAGCTTGCAT i panTro4.chr6 C 0 M 596 s nomLeu3.chr3 156333542 251 + 157873769 gatgagaaagactgcaagttactaacctactggagtttta-ctgccccacatggcccactggagcctggcctcgggctagaagctgtgaagctggtatattcactcagtgcca---actcctctccttcaagtgctaattctggcccagaatctgcctgctttGGAGCATGA-TGTAAACTTGGCCTCCCTTCATGCTACATACAGGCCCCGGAAATGGGACACCAACCCCAGg------gtgctctgggaccagcttgcat i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168150456 247 + 169853907 gatgagaaagactgcaagtt----acctactggagtttta-ctgcctcacatggcccactggagcctggccttgggctagaagctgtgaagctggtatattcactcagtgcca---gctcctctcctccaagtgctaattctggcccagaatctgcctgctttGGAGCATGA-TGTAAACTTATCCTCCTTTCATGCTACATACAGGCCACGGAAATGGGACACCCACCCCAGg------gtgttctgggaccagcttgcat i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169105323 247 - 170955103 gatgagaaagactgcaagtt----acctactggagtttta-ctgcctcacatggcccactggagcctggccttgggctagaagctgtgaagctggtatattcactcagtgcca---gctcctctcctccaagtgctaattctggcccagaatctgcctgctttGGAGCATGA-TGTAAACTTGTCCTCCTTTCATGCTACATACAGGCCACGGAAATGGGACACCCACCCCAGg------gtgttctgggaccagcttgcat i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163923579 247 + 165299245 GATGAGAAAGACTGCAAGTT----ACCTACTGGAGTTTTA-CTGCCTCACGTGGCCCACAGGAGCCTGGCCTTGGGCTAGAAGCTGTGAAGCTGGTATATTCGCTCAGTGCCA---GCTCCTCTCCTCCAAGTGCTAATTCTGGCCCAGAATCTGCCTGCTTTGGAGCATGA-TGTAAACTTGTCCTCCTTTCATGCTACATACAGGCCACGGAAATGGGACACCCACCCTAGG------GTGTTCTGGGACCAGCTTGCAT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96709616 247 + 98384682 gatgagaaagactgcaagtt----acctactggagtttta-ctgcctcacgtggcccactggagcctggccttgggctagaagctgtgaagctggtatattcactcagtgcca---gctcctctcctccaagtgctaattctggcccagaatctgcctgctttGGAGCATGA-TGTAAACTTGTCCTCCTTTCATGCTACATACAGGCCACAGAAAAGGGACACCCACCCTAGg------gtgttctgggaccagcttgcat i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169917671 242 + 171630274 gatgagaaaggctgcaggtt----acctcctgcggtttta-ctgccccacgtggcccacgggagcctggccttgggctaaaggctgcgaagctgg-acattcactcagggcct---gttcctgtcctccacgtgctgattcccacccagaatctgcctgctttGGAGCGCGACTGTAAACTCGGCCTCGCTTCATGC----TACAGGCCACAGAAATGGGACGCTCACCCCAGG------GTGTTCTGGGACCAGCTTCCT- i calJac3.chr4 C 0 C 0 s canFam3.chr1 56197666 228 + 122678785 ggtgacaaagactgcagact----atctattggacttttagctatctcacat-gctttctggggcctggcctcagactagaagctgtgaagatagaaaatcaattctctacaaagtaccttttttttccgagtgatgattcctctcaaaaacctgcccactcttgGCCATGT-GATAAACT----------------------------ATAAGGATGGGAAACCCATCCTATGCCTgtagagtgctggagccatcttccat i canFam3.chr1 C 0 C 0 e ponAbe2.chr6 172473747 1009 + 174210431 I a score=258111.000000 s hg38.chr6_KB021644v2_alt 131846 169 + 185823 tgatttgcaagagtg-attgttgaacattctgcaatttccaagctggctgttccatcatttgtagcttgaaaccagaagttgattaaacatggtgggacca-tttataccatggtacttgacaaactacaaaccaggTGTGtctgtctgtctgtctctctctctctctctc s nomLeu3.chr3 156333793 169 + 157873769 tgatttgcaagagtg-attgttaagcattctgcaatttccaagctggctgttccatcatttgtagcttgaaaccagaaattgattaaacatggtgggacca-tttataccatggtacttgacaaactacaaaccaggtctctctctctctctctgtctctctctctctctc i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168150703 157 + 169853907 tgatttgcaagagtc-attgttaaacattctgcaatttccaagtgggctgttcaatcatttgtagcttgaaaccagaaattcattaaacatggtgggacta-tttataccatggtacttgacaaactacaaaccagg------------tctctctctctctctcTCTTTT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169105570 157 - 170955103 tgatttgcaagagtc-attgttaaacattctgcaatttccaagtgggctgttcaatcatttgtagcttgaaaccagaaattcattaaacatggtgggacta-tttataccatggtacttgacaaactacaaaccagg------------tctctctctctctctcTCTTTT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163923826 156 + 165299245 TGATTTGCAAGGGTC-ATTGTTAAACATTCTGCAATTTCCAAGTGGGCTGTTCAATCATTTGTAGCTTGAAACCAGAAATTAATTAAACGTGGTGGGACTATTTTATACCATGGTACTTGACAAACTACAAaccagg--------------tctctctctctctctctttt i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96709863 155 + 98384682 tgatttgcaagagtc-attgttaaacattctgcaatttccaagtgggctgttcaatcatttgtagcttgaaagcagaaattcattaaacatggtgggacta-tttataccatggtacttgacaaactacaaaccagg--------------tctctctctctctctcTTTT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169917913 156 + 171630274 TGATGTGAAAGAGCC-ATTGTTAGACATTCTGCAGTTTCCAACCTGCCTG-----------GTAGCTTGAAACCAGACATTGACTAAACAC-GTGGGACCA-TGTATATCAC-GTACTCGACAAACTACGAACCAGGtgtctctttctctctctgtctccgtctctgtctc i calJac3.chr4 C 0 I 477 s canFam3.chr1 56197894 127 + 122678785 tggctcacaagaaccaattgccaaatattctgaaattttccaattgattgtaaagtcatttacagtttgaaatcag-----------acatggtggga--a-ttaacaccatgataactgacaaaTTATCAAGCA----------------CCTCTC-------------- i canFam3.chr1 C 0 C 0 e ponAbe2.chr6 172473747 1009 + 174210431 I e panTro4.chr6 170719672 596 + 172623881 M a score=39093.000000 s hg38.chr6_KB021644v2_alt 132015 22 + 185823 -tctT--------------TTGTGGGGAGGGCAACTA s nomLeu3.chr3 156333962 22 + 157873769 -CCTT--------------TTGTGGGAAGGGCAACTA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168150860 22 + 169853907 -CTTT--------------TTGTGGGGAGGGCAATTA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169105727 22 - 170955103 -CTTT--------------TTGTGGGGAGGGCAATTA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163923982 22 + 165299245 -cttt--------------ttgtggggAGGGCAATTA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96710018 22 + 98384682 -CTTT--------------TTGTGGGGAGGGCAATTA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169918546 22 + 171630274 -TCTT--------------TTGGGGGGAGGGCAATTA i calJac3.chr4 I 477 C 0 s canFam3.chr1 56198021 37 + 122678785 TCTTTAGCGGAGGGGAGGGTGGTGGAGAGACCAATTT i canFam3.chr1 C 0 C 0 e ponAbe2.chr6 172473747 1009 + 174210431 I e panTro4.chr6 170719672 596 + 172623881 M a score=61113.000000 s hg38.chr6_KB021644v2_alt 132037 29 + 185823 ATGAGTACCCTACTACCCAA-GACATTTAC s ponAbe2.chr6 172474756 29 + 174210431 ATGAGTACACTACTACCCAA-GACATTTAC i ponAbe2.chr6 I 1009 I 70 s nomLeu3.chr3 156333984 29 + 157873769 ATGAGTACACTACTACCCAA-GACATTTAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168150882 29 + 169853907 ATGAGTACACTACTATCCAA-GACATATAC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169105749 29 - 170955103 ATGAGTACACTACTATCCAA-GACATATAC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163924004 29 + 165299245 ATGAGTACACTACTATCCAA-GACATATAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96710040 29 + 98384682 ATGAGTACACTACTATCCAA-GACATATAC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169918568 30 + 171630274 ATGAGTGCAGTACTGCTCAACGGCCTTTAC i calJac3.chr4 C 0 C 0 s canFam3.chr1 56198058 30 + 122678785 ACAGCTACATTGATGTTCAACACCACTTGT i canFam3.chr1 C 0 C 0 e panTro4.chr6 170719672 596 + 172623881 M a score=130512.000000 s hg38.chr6_KB021644v2_alt 132066 78 + 185823 CACTTTATTT---CCTCAAATGTTAACTCTCACTCAGGACTTGCCAGCTTATGGTTTTTCTCTGTTCCTCCAGATAACTGT s nomLeu3.chr3 156334013 77 + 157873769 CACTTTATTT---CATCAAATGTTGACTCTTATTCA-GACTTGCCAGCTTTTGGTTGTTCTCTGTTCCTCCAAATAACTGT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168150911 78 + 169853907 CACTTTATTT---CCTCAAATGTTGACTCCCATTCAGGACTTGCCAGCTTCTGGTTGTTCTCTATTCCTCCAGATAACTGT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169105778 78 - 170955103 CACTTTATTT---CCTCAAATGTTGACTCCCATTCAGGACTTGCCAGCTTCTGGTTGTTCTCTATTCCTCCAGATAACTGT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163924033 78 + 165299245 CACTTTATTT---CCTCAAATGTTGACTCCCATTCAGGACTTGCCAGCTTCTGGTGGTTCTCTATTCCTCCAGATAACTGT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96710069 78 + 98384682 CACTTTATTT---CCTCAAATGTTGACTCCCATTCAGGACTTGCCAGCTTCTGGTTGTTCTCTATTCCTCCAGATAACTGT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169918598 77 + 171630274 CACTTTATTT---CCACAAAGGTTGAC-CCCATCCAGGACACGCCAGCTTTCGGTCATTCTATGTTCCTCCAGATAACtgt i calJac3.chr4 C 0 I 180 s canFam3.chr1 56198088 61 + 122678785 CATTTTTTTTTTCCTTCAAAGATTGACTTACCTCTAGAATATCCCTGGTTTTGATCGCTGT-------------------- i canFam3.chr1 C 0 C 0 e ponAbe2.chr6 172474785 70 + 174210431 I e panTro4.chr6 170719672 596 + 172623881 M a score=14341.000000 s hg38.chr6_KB021644v2_alt 132144 28 + 185823 TATATGtctctctctctctctctctctc s nomLeu3.chr3 156334090 28 + 157873769 TATATGtctctctctctctctctctctc i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168150989 26 + 169853907 TATATGtctctctctctctctctctc-- i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169105856 26 - 170955103 TATATGtctctctctctctctctctc-- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163924111 12 + 165299245 Tatatgtctctc---------------- i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96710147 26 + 98384682 TATGTCTCTCtgtgtgtgtgtgtgtg-- i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169918675 180 + 171630274 I e canFam3.chr1 56198149 0 + 122678785 C e ponAbe2.chr6 172474785 70 + 174210431 I e panTro4.chr6 170719672 596 + 172623881 M a score=2454.000000 s hg38.chr6_KB021644v2_alt 132172 8 + 185823 tctctctc s panTro4.chr6 170720281 8 + 172623881 tctctctc i panTro4.chr6 M 596 C 0 s nomLeu3.chr3 156334118 8 + 157873769 tctctctc i nomLeu3.chr3 C 0 C 0 s canFam3.chr1 56198149 7 + 122678785 -CCACTTC i canFam3.chr1 C 0 C 0 e calJac3.chr4 169918675 180 + 171630274 I e chlSab2.chr13 96710173 0 + 98384682 C e papAnu2.chr4 163924123 0 + 165299245 C e rheMac3.chr4 168151015 0 + 169853907 C e ponAbe2.chr6 172474785 70 + 174210431 I e macFas5.chr4 169105882 0 - 170955103 C a score=6127.000000 s hg38.chr6_KB021644v2_alt 132180 14 + 185823 tctctctctctctc- s panTro4.chr6 170720289 14 + 172623881 tctctctctctctc- i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172474855 14 + 174210431 tctctctctctctc- i ponAbe2.chr6 I 70 C 0 s nomLeu3.chr3 156334126 14 + 157873769 tctctctctctctc- i nomLeu3.chr3 C 0 M 252 s macFas5.chr4 169105882 8 - 170955103 ------tctctctg- i macFas5.chr4 C 0 C 0 s canFam3.chr1 56198156 14 + 122678785 -CCCTACTTAGTTGC i canFam3.chr1 C 0 C 0 e calJac3.chr4 169918675 180 + 171630274 I e chlSab2.chr13 96710173 0 + 98384682 C e papAnu2.chr4 163924123 0 + 165299245 C e rheMac3.chr4 168151015 0 + 169853907 C a score=5065.000000 s hg38.chr6_KB021644v2_alt 132194 8 + 185823 tctctctc s panTro4.chr6 170720303 8 + 172623881 tctgtgtg i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172474869 8 + 174210431 tctctctc i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168151015 6 + 169853907 --tgtgtg i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169105890 8 - 170955103 tgtgtgtg i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163924123 4 + 165299245 ----tgtg i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96710173 6 + 98384682 --tgtgtg i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56198170 8 + 122678785 TCTGTGTT i canFam3.chr1 C 0 C 0 e calJac3.chr4 169918675 180 + 171630274 I e nomLeu3.chr3 156334140 252 + 157873769 M a score=63892.000000 s hg38.chr6_KB021644v2_alt 132202 23 + 185823 tgtgtgtgtgtgtgtatgtgtgt s panTro4.chr6 170720311 23 + 172623881 tgtgtgtgtgtgtgtgtgtgtgt i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172474877 23 + 174210431 tctgtgtgtgtgtgtgtgtgtgt i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168151021 23 + 169853907 tgcgtgtgtgtgtgtgtgtgtgt i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169105898 23 - 170955103 tgtgtgtgtgtgtgtgtgtgtgt i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163924127 23 + 165299245 tgtgtgtgtgtgtgtgtgtgtgt i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96710179 23 + 98384682 tgtgtgtgtgtgtgtgtgtgtgt i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169918855 23 + 171630274 tgtgtgtgtgtgtgCATGCATGT i calJac3.chr4 I 180 I 19 s canFam3.chr1 56198178 20 + 122678785 --TGTGTGTGTGTGT-TGTGTGG i canFam3.chr1 C 0 C 0 e nomLeu3.chr3 156334140 252 + 157873769 M a score=667904.000000 s hg38.chr6_KB021644v2_alt 132225 233 + 185823 TAGGAGTACGGTAGTAGTTCTACAAAAGAACAACTACAAAAGAAAACTCATAGCTGTTATCTCAAACAAGGTGAATAGGCTCTGATGGGAGCCTTTCAGCCATCATTATAAACAAAAACCCTTTCAATGTATCTTCAATAAAAAGAT--CCTCTCTCTTCTTTCTTAGA-CATCATGTGATCTCTGTTCGTATGACAGGCTCTTCTGA--TCCA--ATCATCTCTACTCATTCCTTAGGT s panTro4.chr6 170720334 233 + 172623881 TAGGAGTACGGTAGTAGTTCTACAAAAGAGCAACCTCAAAAGAAAACTCATAGCTGTTACCTCAAACAAGGTGAATAGGCTCTGATGGGAGCCTTTCAGCCATTATTATAAACAAAAACCCTTTCAATGTATCTTCAATAAAAAGAT--CCTCTCTCTTCTTTCTTAGA-CATCATGTGATCTCTGTTCCTATGACAGGCTCTTCTGA--TCCA--ATCATCTCTACTCATTCCTTAGGT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172474900 233 + 174210431 TAGGAGTATGGTAGTAGTTCTACAAAAGAACAACTACAAAAGAAAACTCATAGCTGTTATCTCAAACAAGGTGAATAGGCTCTGATGGGAGCCTTTCAGCCATTATTATAAACAAAAACCCTTTCAATGTATCTTCAATAAAAAGAT--CCTCTCTCTTCTTTCTTAGA-CAACGTGTGATCTCTGTTCCTATGACAGGTTCTTCTGA--TCCA--ATCATCTCTACTCATTCGTTAGGT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156334395 226 + 157873769 TAGGAGTATGGTAGTAGTTCTACAAAAGAACAACTACAAAAGATAACTCACAGCTGTTATCTCAAACAAGGTGAATAGGCTCTGATGGGAGCCTTT----CATTATTAT-AACAAAAACCTTTTCAATGTATCT--AATAGAAAGAT--CCTCTCTCTTGTTCTTAGGA-CATCATGTGATCTCTGTTCCTATGACAGGCTCTTCTGA--TCTA--ATCATTTCTACTCATTCCTTAGGT i nomLeu3.chr3 M 252 C 0 s rheMac3.chr4 168151044 233 + 169853907 TAGGAGTATGGTAGTAGTTCTACAAAAGAACAACTACAAAGGAAAACTCATAGCTGTTATCTCAAACGAGGTGAATAGGCTCTGATGGGAGCCTTTCAGCCATTAGTATAAACAAAAACGGTTTCAATGTATCCTCAATAAAAAAAT--CCTCTCTCTTCTTTCTTAGA-CAACGTGTGATCTCTGTTCCTATGACAGACTCTTCTGA--TCCA--GTCATCTCTACTCATTCCTTAGGT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169105921 233 - 170955103 TAGGAGTATGGTAGTAGTTCTACAAAAGAACAACTACAAAGGAAAACTCATAGCTGTTATCTCAAACGAGGTGAATAGGCTCTGATGGGAGCCTTTCAGCCATTAGTATAAACAAAAACGGTTTCAATGTATCCTCAATAAAAAAAT--CCTCTCTCTTCTTTCTTAGA-CAACGTGTGATCTCTGTTCCTATGACAGACTCTTCTGA--TCCA--GTCATCTCTACTCATTCCTTAGGT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163924150 233 + 165299245 taggagtATGGTAGTAGTTCTACTAAAGAACAACTACAAAGGAAAACTCATAGCTGTTATCTCAAACGAGGTGAATAGAGTCTGATGGGAGCCTTTCAGTCATTAGTATAAACAAAAACGGTTTCAATGTATCCTCAATaaaaaaat--cctctctcttctttcttaga-CAACGTGTGATCTCTGTTCCTATGACAGACTCTTCTGA--TCCA--GTCATCTCTATTCATTCCTTAGGT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96710202 231 + 98384682 TAGGAGTATGGTAGTAGTTCTACAAAAGAACAACTACAAAGGAAAACTCATAGCTGTTATCTCAAACGAGGTGAATAGGCTCTGATGGGAGCCTTTCAGCCATTAGTATAAACAAAAACGGTTCCAATGTATCCTCAATAAAAAAAT--C--CTCTCTTCTTTCTTAGA-CAACGTGTGATCTCTGTTCCTATGACAGACTCTTCTGA--TCCA--GTCATCTCTACTCATTCCTTAGGT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169918897 217 + 171630274 TAGGAGTATGTCAGTAGTTCCACAGAAGAA--------------AATTCATAGCTGTTATCTCAGAGAAGGTGAATAGGCTCTAGTGGGGCCCTTTCAGCCATCATTATAAACAAAAGCCCTTCCACTGTGTCTTCAGGAGAAAGG---CCTCTCTCTTCTTTCTGGGA-CAGCTTCTCGTCTCTCTGCCTGTGCAAAGCTCTTCTGA--TCCA--GTC-TCTGCACTCATTCCTTAGGT i calJac3.chr4 I 19 C 0 s canFam3.chr1 56198198 207 + 122678785 --------TAGCAGCAGTTCTACAAA---------------GAGAGCTTATTGCTGTTACATGAGAGAAGAT-----GGGTCTGTAGGAACATGTTCAACCATTGGCGTGAGTAAAAGCCCTTTGA-----TTTTGAATGAAGAGCTTCCCTGTTTCTTCTTTCTGGGCTCAATTTGAGATCCCCATTTCTATAAATATCTGTTCTAATTTCCATCAACAGCTCTACCCACTTCTGAGAT i canFam3.chr1 C 0 I 187 a score=2552879.000000 s hg38.chr6_KB021644v2_alt 132458 861 + 185823 TAATTTTTGGCTTGATCAGTATTAATGTTCATATTAAGGCTTTTCATAATCAATTTGTGAC----TTAACACAATTAATATATTTAAACATCTATTAAAACTGAAATACATTTGTGCCCATCTATAGAG----AGGGAAGTTTCTCACATGTTCTCTACAAACACTGGCTACTTGGTTACAAGAAACACTTTCACATTTTCTAGTCCCACAGGCTATTCAC---CA-ACTCTTATGT-TTT-GTCATGAAGACTAAGCTTAGCTCATAGTGGCAAATGTACCACTTACTCAGTCATTCCTTCA-AAATGATTTATTAACTGCTTGGATAATAACCATGTAAACAAGTATATTC---ATAATTACAAGAACTTGTACGTCATGAAGTAAAGAAAC--TGTGATACAATTGCCCTAATAATAGAGAAACTCAttagagagtgtgtttgtagaatgtctggctgtgcaagtaatatttaagctaatatttaaaggatgagaagaaattgttcactaaggaactgaagaattaagaagtaaacattccagaacattccaggtataaggaaccttgtgcc-aaattccctaggataagaaagaa-tttttcagc--atgtcaaaataactgaacgaagccagtgtggatggattttagtaat-caggcgacagtgatatggaaggggt-aggagt--------gaaagc-----aggaaagggtgccatgtagagtactgcagaccaagttaagccacgagcctgggtttt--atacattgcaatggggagacgttgaaacagcatagtcaggagtgg-ctgacataattcat-aggt-aaaaagataactgtg--acctgaattac-cagcggattaaagaggggaagagagggcaaaagaagaatccaggg s panTro4.chr6 170720567 861 + 172623881 TAATTTTTGGCCTGATCAGTATTAATGTTCATATTAAGGCTTTTCATAATCAATTTGTGAC----TTAACACAATTAATATATTTAAACATCTATTAAAACTGAAATACATTTGTGCCCATCTATAGAG----AGGGAAGTTTCTCACATGTTCTCTACAAACACTGGCTCCTTGGTTACAAGAAACACTTTCACATTTTCTAGTCCCACAGGCTATTCAC---CA-ACTCTTATGT-TTT-GTCATGAAGACTAAGCTTAGCTCATAGTGGCAAATATACCACTTACTCAGTCATTCCTTCA-AAACGATTTATTAACTGCTTAGATAATAACCATGTAAACAAGTATATTC---ATAATTACAAGAACTCGTACGTCATGAAGTAAAGAAAC--TGTGATACAATTGCCCTAATAATAGAGAAACTCAttagagagtgtgtttgtagaatgtctgcctgtgcaagtaatatttaagctaatatttaaaggaggagaagaaattgttcactagggaactgaagaattaagaagtaaacattccagaacattccaggcataaggaaccttgtgcc-aaattccctaggataagaaagaa-tttttcagc--atgtcaaaataactgaacgaagccggtgtggatggattttagtaat-caggcgacagtgatatggaaggggt-aggagt--------gaaagc-----aggaaagggtgccacgtagagtactgcagaccaagttaagccacgaacctgggtttt--atacattgcaatggggagacattgaaacagcatagtcaggagtgg-ctgacataattcat-aggt-aaaaagataactgtg--acctgaattac-cagcggattaaagaggggaagagagggcaaaagaagaatccaggg i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172475133 859 + 174210431 TAATTTTTGGCCTGATGAGTATTAATGTTCATATAAAGGCTTTTCGTAATCAATTTGTGAC----TTAACAAAATTAATATATTTAAACATCTATTAAAACTAAAATACATTTGTGCCCATCTATAGAG----AGGGAAGTTTCTCACATGTTCTCTACAAACACTGGCTCGTTGGTTACAAGAAACACTTTCACATTTTCTAATCCCGGAGGCTATTCAC---CA-ACTCTTATGT-TTT-GTCATGAAGACTAAGCTTAGCTCATAGTGGCAAATATACCACTTACTCAGTCATTCCTTCA-AAATGATTTATTAACTGCTTGGATAATAATCATGTAAACAAGTATATTC---ATAATTACAAGAACTCGTATGTCATGAAGTAAAGAAAC--TGTGATGCAATTGCTGTAATAATAGAGAAACTCAttagagagtgtgtttgtagaaggtccggctgtgcaagtaatatttatgctaatatttaaaggatgagaagaaattgttcactaaggagctgaagaattaagaagt----------gaacattccaggcataaggaaccttgtgcc-aaattccctaggataagaaagaa-tttttcagc--atgtcaaaataactgaaagaagccggtgtggatggattttagtaat-caggtgatagtgatatggaaggggt-aggagtgaaagcaggaaagc-----aggaaagggtgccacgtagagcactgcagaccaagttaagccacgagcctgggtttt--atacattgcaatggggagacattgaaactgcatagtcaggagtgg-ctgacataattcat-aggt-aaaaagataactgtg--acctgaattac-cagcggattaaagaggggaagagagggcaaaagaagaatccaggg i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156334621 841 + 157873769 TAATTTTTGGCCTGATCAATATTAATGTTCATATAAAGGCTTTTCATAATCAATTTGTGAC------AACAC----AATATATTTAAACATCTATTAAAACTGAAATACATTTGTGCCCATTTATAGAG----AGGGAAGTTTCTCACATGTTCTCTACAAACACTGGCTCATTGGTTACAAGAAACACTTTCACATTTTCTAATCCCAGAGGCTATTCAC---CA-ACTCTTATGT-TTT-GTCATGAAGACTAAGCTTGGCTCATAGTGGCAAATATACCACTT----AGTCATTCCTTCA-AAACGATTTATTAACTGCTTAGATAATAACCATGTAAACAAGTATATTC---ATAATTACAAGAACTTGTATGTCATGAAGTAAAGAAACTGTGTGATGTCATTGCCCTAATAATAGAGAAACTCAttagagagcgtgtttgtagaaggtccagctgtacaagtaatatttaagctattatttaaaagatgagaagaaattgttcactaaggagctgaagaattaagaagt----------aaacattccaggcataaggaaccttgtgcc-aaattccctaggataagaaagaa-ttttccagc--atgtcaaaataactgaaagaagccggtgtggatggattttagtaat-caggtgatagtgatatggaaggggt-aggagt--------gacggc-----aggaaagggtgccacatagagtactgcagaccaagttaagccaagagcctgggtttt--atacattgcaatggggagacattgaaactgcatagtcaggagt-g-ctgacgtaattcat-aggt--aaaagat-actgtg--acctgaattactcagcggattaagaggggaagaagagggcaaaagaagaatccaggg i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168151277 853 + 169853907 TAATTTTTGGCCTGATCAACATTAATGCTCATATAAGGGCTTTTCATAATCAATTTGTGAC------AACACAATTAATATATTGAAACATCTATTAAAACTGAAATGCATTTGTGCCCATCTATAGAG----AAGGAAGTTTCTTACATGTTCTTTACAAACACTAGCTCGTTGGTTACAAGAAACACTTTCACATTTTCTAATCCCAGAGGCTATTCAC---CA-ACTCTTATGT-TTT-GT--TGAACA-TAAGCTTAGCTCATCGTGGCAAATATACCACTTACTCAATCATTCCTTCA-AAACAATTTATTAACTGCTTGGATAATAACCATGTAAACAAGTATATTC---ATAATTACAAGAACTCGCATGTCATGAAGTAAAGAAACTGCGTGATGTAATTACCCTAATAATAGAGAAACTCAttagagagtgtgtttgtagaaggtccggctgtccaagtaatatttaagctaatacttaaaggatgagaagaaattgttcactaaggagctgaagaataaagaagt----------aaacattccaggcgtaaggaaccttgtgcc-aaattccctaggataacaaagaa-ttttttggc--atgtcaaagtaactgaaagaagccggtgtggatggattttagtaat-caggtgatagtgatatggaaggggt-aggagt--------gaaagcaggaaaggaaagggtgccacatagagtactgcagaccaagttaagccaagagcctgtgtttt--atacattgcaatggggagacattgaaacagcgtagtcaggagtgg-cagacctaattcat-aggt-aaaaagataactgtg--acctgaattac-cagcggattaaagaggggaagagagggcaaaagaagaatccaggg i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169106154 853 - 170955103 TAATTTTTGGCCTGATCAACATTAATGCTCATATAAGGGCTTTTCATAATCAATTTGTGAC------AACACAATTAATATATTGAAACATCTATTAAAACTGAAATGCATTTGTGCCCATCTATAGAG----AGGGAAGTTTCTTACATGTTCTTTACAAACACTAGCTCGTTGGTTACAAGAAACACTTTCACATTTTCTAATCCCAGAGGCTATTCAC---CA-ACTCTTATGT-TTT-GT--TGAACA-TAAGCTTAGCTCATCGTGGCAAATATACCACTTACTCAATCATTCCTTCA-AAACAATTTATTAACTGCTTGGATAATAACCATGTAAACAAGTATATTC---ATAATTACAAGAACTCGCATGTCATGAAGTAAAGAAACTGCGTGATGTAATTACCCTAATAATAGAGAAACTCAttagagagtgtgtttgtagaaggtccggctgtccaagtaatatttaagctaatacttaaaggatgagaagaaattgttcactaaggagctgaagaataaagaagt----------aaacattccaggcgtaaggaaccttgtgcc-aaattccctaggataacaaagaa-ttttttggc--atgtcaaagtaactgaaagaagccggtgtggatggattttagtaat-caggtgatagtgatatggaaggggt-aggagt--------gaaagcaggaaaggaaagggtgccacatagagtactgcagaccaagttaagccaagagcctgtgtttt--atacattgcaatggggagacattgaaacagcatagtcaggagtgg-cagacctaattcat-aggt-aaaaagataactgtg--acctgaattac-cagcggattaaagaggggaagagagggcaaaagaagaatccaggg i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163924383 846 + 165299245 TAATTTTTGGCCTGATCAACATTAATGCTCATATAAGGGCTTTTCATAATCTATTTGTGAC------AACACAATTAATATATTGAAACATCTATTAAAACTGAAATGCATTTGTGCCCATCTATAGAG----AGGGAGGTTTCTTACATGTTCTTTACAAACACTAGCTCGTTGGTTACAAGAAacactttcacattttctaatCGCAGAGGCTATTCAC---CA-ACTCTTATGT-TTT-GT--TGAACA-TAAGCTTAGCTCATCGTGGCAAATATACCACTTACTCAATCATTCCTTCA-AAACAATTTATTAACTGCTTGGATAATAACCATGTAAACAAGTATATTC---ATAATTACAAGAACTCGTATGTCATGAAGTAAAGAAACTGCGTGATGTAATTACCCTAATAATAGAGAAACTCTTTAGAGAGTGTGTTTGTAGAAGGTCCGGCTGTCCAAGTAATATTTAAGCTAATACTTAAAGGATGAGAAGAAATTGTTCACTAAGGAGCTGAAGAATAAAGAAGT----------AAACATTCCAGGCGTAAGGAACCTTGTGCC-AAATTCCCTGGGATAACAAAGAA-TTTTTCAGC--ATGTCAAAGTAACTGAAAGAAGCTGG-GTGGATGGATTTTAGTAAT-CAGGTGATAGTGATATGGAAGGGGT-AGGAGT--------GAAAGCAGGAAAGGAAAGGGTGCCACATAGAGTACTGCAAACCAAGTTAAGCCAAGAGCCTGTGTTTT--GTACATTGCAATGGGGAGACATTGAAACAGCAT------GAGTGG-CTGACATAATTCAT-AGGT-AAAAAGATAACTGTG--ACCTGAATTAC-CAGTGGATtaaagaggggaagagagggcAAAAGAAGAATCCAGGG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96710433 849 + 98384682 TAATTTTTGGCCTGATCAACATTAATGCTCATATAAGGGCTTTTCATAATCAATTTGTGAC------AACACAATTAATATATTTAAACATCTATTAAAACTGAAATGCATTTGTGCCCATCTATAGAG----AGGGAAGTTTCTTACATGTTCTTTACAAACACTAGCTCGCTGGTTACAAGAAACGCTTTCACATTTTCTAATCCCAGAGGCTATTCAC---CA-ACTCTTATGT-TTT-GT--TGAACA-TAAGCTTAGCTCATCGTGGCAAATATACCACTTACTCAATCATTCCTTCA-AAACAATTTATTAACTGCTTGGATAATAACCATGTAAACAAGTATATTC---ATAATTACAAGAACTCGTATGTCATGAAGTAAAGAAACTGCGTGATGTAATTACCCTAATAATAGAGAAACTCATTAGAGAGTGTGTTTGTAGAAGGTCCGGCTGTGCaagtaatatttaagctaatacttaaaggatgagaagaaattgttcactaaggagctgaagaataaagaagt----------aaacattccaggcctaaggaaccttgtacc-aaattccctaggataacaaagaa-ttttttggcatatgtcaaagtaactgaaagaagccggtgtggatggattttagtaat-caggtgatagtgatatggaaggggt-aggagt--------gaaagcaggaaaggaaagggtgccacatagagtactgcagaccaagttaagccaagagcctgtgtttt--gtacattgcaatgggcagacattgaaacagcat------gagtgg-ctgacataattggt-aggt-aaaaagataactgtg--acctgaattac-cagtgaattaaagaggggaagagagggcaaaagaagaatccaggg i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169919114 836 + 171630274 CAGTTTTTAGCCTGATCGATACTAACGCTCCCATAAGGGCTTTTCGTGATCAATGTGTGAC----TTAACAC----AATATATTTAAGCATCTATTAAAACGGAAATACACTCGTGCCCATCTGTAGAAGGATAAGGACGTTTCTCCCATGTTCTCTGCAAACACTAGCTCACTGGTGGCGAGAAACACTTTCCCAGTGTGTAATGCCAG-GGCTGTTCACGATGA-ACTCGTACGTGTTG-GTCATGAAGACCAGGCCTAGCTTGTCGTGGCAAATATACTGCTT-TTCAGTCATCCTTTCC-AAACCGCTTAGTAACTGCCTGGCTAATAACCACGTAAACAAGTACATTC---ACAACGGCAAGAACT-ATATGTCATGAAGGAAAGAAAC--TGTGAGGTAATTGCCCTAATAAT----AAACTCAT--GAGAGAGTGTTTAGGGAAGATCCGGCTGTACaagtaatatttaagctgatatttaga-gatgagaggaaattgttcactaaggagctgaagaattaagaagt----------aaacattccaggcataaggaaccttgtgct-acattccctaggataggaaggaattttttcagc--ttgtcaacataactgaaagaagccggcgtgcatggaccgtagtcat-cagggcacagtggtaTGGACGGGGG-AGGGAT--------GAAAGC-----GGGAGAGGGCGCCGTGTGGAA-ACTGCAGACCTGGTCAATCCAAGAGCCTGGGTCTT--ACCCGCCGCAGTGGGCAGACATTGAAACAGTGTAGACAGGCGTGG-C-----TAATCCAC-AGGTTAAAAAGGTGACTGC----TCTGAATCAC-CAGCAGATTAAGAGGGG--AGAGAGGGCAGCAGAAGAATCC-GGG i calJac3.chr4 C 0 C 0 s canFam3.chr1 56198592 839 + 122678785 TAATTTTTGGTCTGATCAATAGCAGTGCTCACA-GAGAGCTTTCCAACATCCACTTGTGAGGGtttttttttaaataatatatttaatCATTTA-GAAAACTGAAATACATGTATGGCCATAGAAAGAT----AAGGAAGTTCCTCACATGTTCTCCATATA-AATAGCTCACTGATTAACAGAAACATG-----GTTTTCCAGACCCAGAGGCTGTCCAT---GAGACTCTTATGT-TTTGGTCATGAAGACTGAGCTTAACTCCTAGTAGTGAACAT-TCATTT------TCATTTATTCATAAAACATGAATTACTTGGATAGGCAACAATCAAGTAAAGCAGCACATTTTGAACTATTACAATACCTCTTGTGCTCTAAAATGAGGGAATAATGTGATGTAATGCC----ATAGGAGAGAAAGTCACTAGAGACTGTATTTATGAAAAGTACAGCCATGCAAGCAATATTGGAGCTGATACCTA-CGGATGAAAATAACTTAATTACAAACGAGCTGATGAATTAAGAAAT----------AAATATTTT-GACATAAAGAAACCTATGATGAGATTCCCTAGGAtgggacagag-tgttttggc--gtctcaaaataagagaaagaagtctacgtggatggagtttaatactccaattgagggtgatatcgaggtggtcaggggc--------agaagc-----agga---ggtgagttgtggag---agcagaccaaactagg----aactctgggttttagagatattgggatggaaggacattgaaaggttatagtcaggggtaatctgatataatttatgagat-aaacagatagcccttccccctgaattgc-caaagggttaaagagg--ACTCTTGGACAGTAGAGTAATCAAGGG i canFam3.chr1 I 187 I 74 a score=400712.000000 s hg38.chr6_KB021644v2_alt 133319 146 + 185823 ggctcattgggagaagctaaggctgtgtgggcggcaggttt--ttgtgacttggactcgggttagggcagtggagatatggaagtTCCTGGCTGTTCAAGAACCCAGTCAGGCTCAGTGGGTTGTGTCATAAGAAATACGCTCTGGGg s panTro4.chr6 170721428 146 + 172623881 ggctcattgggagaagctaaggctgtgtgggcggcaggttt--tcgtgacttggactcgggttagggcagtggagatatggaagtTCCGGGCTGTTCAAGAACCCGGTCAGGCTCAGTGGGTTGTGTCATAAGAAATACGCTCTGGGg i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172475992 146 + 174210431 ggctcattgggagaagctaaggccgtgtgggtggcaggttt--tcgagacttggactcgggttagggcagtggagatatggaagtTCCTGGCTGTTCAAGAACCCGGTCAAGCTCAGTGGGTTGTGTCATAAGAAATACACTTTGGGg i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156335462 146 + 157873769 ggctcatcgggagaaactaaggctgtgtgggtggcaggttt--tcatgacttggactcgggttagggcagtggagatatggaagtTCCTGGCCGTTCAAGAACCTGGTCTGGCTCGGTGGGTTGTGTCATAAGAAATACACTCTGGGg i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168152130 146 + 169853907 ggctcactgggagaagctaaggctgtgtaggtggcaggttt--tcgtgacttggactcgggttagggcagtggagatgtgaagaTTCCTGACAGTTGAAGATCCTGGACAGGCTCAGTGGGCTGTGTCATAAGAAATACGTTCTGGAg i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169107007 146 - 170955103 ggctcactgggagaagctaaggctgtgtaggtggcaggttt--tcgtgacttggactcgggttagggcagtggagatgtggagaTTCCTGACAGTTGAAGATCCTGGACAGGCTCAGTGGGCTGTGTCATAAGAAATACGTTCTGGAg i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163925229 146 + 165299245 GGCTCACTGGGAGAAGCTAAGGCTGTGTAGGTGGCAGGTTT--TCGTGACTTGGACTCGGGTTAGGGCAGTGGAGATGTGGAGATTCCTGACAGTTGAAGATCCTGGACAGGCTCAGTGGGCTGTGTCATAAGAAATATgctctggag i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96711282 146 + 98384682 ggctcactgggagcagctaaggctgtgtaggtggcaggttt--tcgtgacttggactcgggttggggcagtggagatgtggagaTTCCTGACAGTTGAAGAACCTGGACGGGCTCAGTGGGCTGTGTCATAAGAAATACGCTCTGGAg i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169919950 145 + 171630274 GGCTCATCGGGAGCAGGTAGGGCTGTGTAGGTGGCGGGTTTTGTTGTGACTTGGACTAGGGTGAGAGTGGTGGAGAGGTGCAGGT---GAACTGTTGGAGAACCGGGCCAGGGTCAGCAGGCTGCGCCGTAAGAAATACGCTCTGGGG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56199431 74 + 122678785 I a score=418063.000000 s hg38.chr6_KB021644v2_alt 133465 188 + 185823 gccaggcgcggtggctcacacctgtaatcccagcactttgggaggccgaggcaggcagatcacaaggtcaggagttcaagaccagactgaccaatatggtgaaaccctgtctctactg----------aaaaaaaaaattagctgggcatggtgtcacgcacctgtagtcccagctacttgggagactgaggcaggag s panTro4.chr6 170721574 194 + 172623881 gccgggcgcggtggcttacacctgtaatcccagcactttgggaggccgaggcaggcagatcacaaggtcaggagttcaagaccagactgaccaatatggtgaaaccctgtctctactg----aaaaaaaaaaaaaaaattagctgggcatggtgtcacgcacctgtagtcccagctacttgggagactgaggcaggag i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172476138 198 + 174210431 gccgggcgcggtggctcacacctgtaatcccagcactttgggaggccgaggcaggcagatcatgaggtcaggagttcaagaccagactgaccgatatggtgaaaccctgtctttactgaaaaaaaaaaaaaaaaaaaattagctgggtgtggtgtcacgcacctgtagtcccagctactcgggagactgaggcaggag i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156335608 190 + 157873769 gctgggcatggtggctcacacctgtaatcccagcactttgggaggccgaggcaggcagatcacgaggtcaggagttcaagaccagactg----atatggtgaaaccctgtctctactg----aaaaaaacaaaaaaaattagctgggcgtggtgtcacgcacctgtagtcccagctacttgggagactgaggcaggag i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168152276 191 + 169853907 gctgggcgcagtggctcacgcctgtattcccagcactttgggaggctgaggcactcagattaccaggtcaggagttcaagactagactgaccaatacggtgaaaccctgtctctactg-------aaaaaaacaaaaattagccgggcgtggtggcaggcacctgtaatcccagctactcaggaggctgaggcaggag i rheMac3.chr4 C 0 I 161 s macFas5.chr4 169107153 191 - 170955103 gctgggcgcagtggctcacgcctgtattcccagcactttgggaggctgaggcactcagattaccaggtcaggagttcaagactagactgaccaatacggtgaaaccctgtctctactg-------aaaaaaacaaaaattagccgggcgtggtggcaggcgcctgtaatcccagctactcgggaggctgaggcaggag i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163925375 189 + 165299245 gctgggcacggtggcacacg--tgtattcccagcactttgggaggctgaggcatgcagatcacgaggtcaggagttcaagactagcctgaacaatatggtgaagctctgtctctactg-------aaaaaaacaaaaattagccgggcatggtggcaggcgcctgtaatcccagctactcgggaggctgaggcaggag i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96711428 192 + 98384682 gctgggcgcagtggctcacgcctgtattcccggcactttgggaggctgaggcactcagatcacgaggtcaggagttcaagactagcctgaccaatacggtgaaactctgtctctactg------aaaaaaaacaaaaattagccgggcgtggtggcgggtgcctgtaatcccagctactcgggaagctgaggcaggag i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169920095 0 + 171630274 C e canFam3.chr1 56199431 74 + 122678785 I a score=144976.000000 s hg38.chr6_KB021644v2_alt 133653 94 + 185823 aatcgcttgaacccgggaggtggaggttgcagtaagccaagatcacgccactgcactccagcctggtgacagagcgagactccgtctcaaaa--ta s panTro4.chr6 170721768 94 + 172623881 aatcgcttgaacccgggaggtggaggttgcagtgagccaagatcacgccactgcactccagcctggtgacagagcgagactccgtctcaaaa--aa i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172476336 94 + 174210431 aatcgcttgaacctgggaggtggaggttgcaatgagccgagatcacgccactgcactccagcctggtgacagagcgagaatccgtctcagaa--aa i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156335798 93 + 157873769 aattgcttgaactctggaagt-gaggttgcagtgagccaagatcacgccactgcactccagcctggcgacagagcgagactccgtatcaaaa--aa i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169107344 94 - 170955103 aatcacttgaacccgggaggcagaggttgcagtgaactgagatcgcgctgctgcactccagcctggtgacaaagtgagactccatctcaaaaag-- i macFas5.chr4 C 0 I 137 s papAnu2.chr4 163925564 92 + 165299245 aatcgcttgaacccaggaggcagaggttgcagtgaactgagatcgcgccgctgcactctagcctggtgacaaagcgagactccatctcaaaa---- i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96711620 92 + 98384682 aatcgcttgaacccgggaggcagaggttgcagtgaactgagatcgcgcagccgcactccagcctggtgacaaagcaagactccatctcaaaa---- i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169920095 0 + 171630274 C e canFam3.chr1 56199431 74 + 122678785 I e rheMac3.chr4 168152467 161 + 169853907 I a score=534.000000 s hg38.chr6_KB021644v2_alt 133747 2 + 185823 gc s panTro4.chr6 170721862 2 + 172623881 ac i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172476430 2 + 174210431 aa i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156335891 2 + 157873769 aa i nomLeu3.chr3 C 0 C 0 s papAnu2.chr4 163925656 2 + 165299245 ac i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96711712 2 + 98384682 ac i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169920095 0 + 171630274 C e canFam3.chr1 56199431 74 + 122678785 I e rheMac3.chr4 168152467 161 + 169853907 I e macFas5.chr4 169107438 137 - 170955103 I a score=6074.000000 s hg38.chr6_KB021644v2_alt 133749 17 + 185823 -aaacaaacaaac------------aaaca s panTro4.chr6 170721864 23 + 172623881 -aaaaaacaaaacaaaa------caaaaaa i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172476432 21 + 174210431 -aaaaaaagaataaaaa--------aaaaG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156335893 29 + 157873769 -aaaaaaaaaaaaaaaaaaaaaaaaaaaaG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169107575 16 - 170955103 -aaaaaagaaaagaaaa------------- i macFas5.chr4 I 137 I 1 s papAnu2.chr4 163925658 17 + 165299245 aaagaaagaaaagaaaa------------- i papAnu2.chr4 C 0 I 1 s chlSab2.chr13 96711714 17 + 98384682 aaagaaagaaaagaaaa------------- i chlSab2.chr13 C 0 I 1 e calJac3.chr4 169920095 0 + 171630274 C e canFam3.chr1 56199431 74 + 122678785 I e rheMac3.chr4 168152467 161 + 169853907 I a score=42795.000000 s hg38.chr6_KB021644v2_alt 133766 15 + 185823 aaaCA-TGCTCTGGGA s panTro4.chr6 170721887 15 + 172623881 aaaca-TGCTCTGGGA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172476453 15 + 174210431 AAACT-TGCTCTGGGA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156335922 15 + 157873769 AAACA-TGCTCTGGGA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168152628 15 + 169853907 aaaCG-TGCTCTGGGA i rheMac3.chr4 I 161 C 0 s macFas5.chr4 169107592 15 - 170955103 aaaCG-TGCTCTGGGA i macFas5.chr4 I 1 C 0 s papAnu2.chr4 163925676 15 + 165299245 aaaca-tgctCTGGGA i papAnu2.chr4 I 1 C 0 s chlSab2.chr13 96711732 15 + 98384682 aaaCA-TGCTCTGGGA i chlSab2.chr13 I 1 C 0 s canFam3.chr1 56199505 16 + 122678785 AAACAGTGCTCCAGGA i canFam3.chr1 I 74 C 0 e calJac3.chr4 169920095 0 + 171630274 C a score=1757938.000000 s hg38.chr6_KB021644v2_alt 133781 595 + 185823 AGGCGTGCCTTG----CTGAATCCTTAAAAACATCTGAATGTGAAGATCAGGTAGAAGGCAACACACTT-CTGAGCCAGCATAGAAGGAACAGATAGAGAGG----------------------------------------------TTAGGGAGACAGGTGCTCGGCTTCAGAGTCATCTTCTGTTCCTCATTGCCAGCTGGGTGTCCTGGAGGAAACATTGGTgatctgatggtgggttggaggagagcagaatgcagaggacgccatgaggatttccagctcatgtgacttgctgcaggatggtgaattgaaattagaactcttagagaaagtggtttctgaaaaacaacctgaagatgtacactttttgtgtattgagtttcaaatgctggtaagatattttagttggaaatgacaaataggtgattga--atatatatgatttgggaattctaatgtatgttctgggctggagggagaacttttggaatcagca---cacagatgagatttaaagccgtg-ggagtccataaaatta---ccctggtagtgaTCTTCTCAATTTAATGCATATTTCTGGTGATTTCTTTTCCCTTACTTCAATCTGCAGTTCACCAGGTATAATTggctaagtagtgaccccagagata- s panTro4.chr6 170721902 595 + 172623881 A-GCGTGCCTTG----CTGAATCCTTAAAAACATCTGAATGTGAAGATCAGGTAGAAGGCAACGCACTTGCTGAGCCAGCATAGAAGGAACAGATAGAGAGG----------------------------------------------TTAGGGAGACAGGCGCTCGGCTTCAGAGTCGTCTTCTGTTCCTCATTGCCAGCTGGGTGTCCTGGAGGAAACATTGGTgatctgatggtgggttggaggagagcagaatgcagaggacgccatgaggatttccagctcatgttacttgctggaggatagtgaattgaaattagaactcttagagaaagtggtttctgaaaaacaacctgaagatgtacactttttgtgtattgagtttcaaatgctggtaagatattttagttggaaatgacaaataggtgattga--atatatatgatttgggaattctaatgtatgttctgggctggagggagaacttttggaatcagca---cacagatgagatttaaagccgtg-ggagtccataaaatta---ccctggtagtgaTCTTCTCAATTTAATGCATATTTCTGGTGATTTCTTTTCCCTTACTTCAATCTGCAGTTCACCGGGTATAATTggctgagtagtgaccccagagata- i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172476468 595 + 174210431 AGGCATGCCTTG----CTGAATCCTTAAAAACATCTGAATTTGAAGATCAGGTGGAAGGCAACACACTTGCTGTGCCAGTGTAGAAGGAGCAGATAGAAAGG----------------------------------------------TTAGGGAGACAGGTGCTCAGCTTCAGAGTCATCTTCTGTTCCTCATTTCCAGCTGGGTGTCCTGGAGGAAACATTGGTgatctgatggtgggttggaggagagcagaatgcagaggatgtcatgaggatttccagctcatgtgacttgctggaggatggtgaatcgaaattagaactcttagagaaagtggtttctgaaaaacaacctgaagatgtacactttttgtgtattgagtttcaaatgctggtaagatattttagttggaaatgacaaataggtgattga--atatatatgatttggtaattctaatgtatgttctgggctggagggagaacttttggaatcagca---cacagatgagatttaaagccgtg-ggagtccataaaatta---ccctggtagtgaTCTTCTCAATTTAATGCATATTTCTGGTGATTTCTTTTCCCTTACTTCAATCTGCAGTTCACCAGGTATAATTggctgagtagtgaccccagagat-- i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156335937 593 + 157873769 AGGCATGCCTTG----CTGAATCCTTAAAAACATCTGAATTTGAAAATCAGGTAAAAGGCAACACACTTGCTGTGCCAGCATAGAAGGAGCAGATAGAAAGG----------------------------------------------TTAGGGAGACAGGTGCTCTGCTTCAAACTCGTCTTCTGTTCCTCATTTCCAGCTGGGCGTCCTGGaggaaa---tgttgatctgagggtgggttggaggagagcagaatgcagaggatgccatgaggatttccagctcatgtgatttgctggaggatggtgaactgaaattagaactcttagagaaagtggtttctgagaaacaacctgaagatgtacactttttgtgtattgagtttgaaatgctggtaagatattttagttggaaatgacaaataggtgattga--atatatatgatttgggaattctaatgtatgttctgggctggagggagaacttttggaatcagca---cacagatgagatttaaagccgtg-ggagtccataaaatta---ccctggtagtgaTCTTCTCAATTTAATGCATATTTCTGGTGATTTCTTTTCCCTTACTTCAATCTGCAGTTCACCAGGTATAACTggctgagtagtgaccccagagata- i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168152643 640 + 169853907 AGGCATGACTTG----CTGAATCCTTAAAAACGTCTGAACGTGAAGATCAGGTAGAAGGCAACACACTTGCTGTGACAGCGTAGAAAGGGCAGATAGAAAGG-TAGGGAAACAGGTCCTTGGCTTCAGAGCCGTCTCGTCTTCCTCGGTTAGGGAAACAGGTCCTTGGCTTCAGAGTCGTCTCCTCTTCCTCATTTCCAGCTGGGTGTCCTGGAGGAAACATTGGTgatctgatggtgggttgcaggacagtggaaggcagaggatgccatgaggatttccagctcatgcgacttgctggaggatggtgaattgaaattagaactcttagagaaagtggtttctgaaaaacagcctgaagatgtacactttttatgtattgagtttcaaatgctggtaagatattttagttggaaatgccaagtaggtgattga--atatatataatttgggaactctaatgtgtgatctagcctggagggagaacttttggaatcagca---tgcagatgagatttaaagccgtg-ggggtccgtaaaatta---ccctggtagtgGTCTTCTCAATTTAATGCATATTTCTGGCGATTTCTTTTCCCTTACTTCAATCTGCAATTCACCAGGTATAATTggctgagtagtgaccccagagat-- i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169107607 640 - 170955103 AGGCATGACTTG----CTGAATCCTTAAAAACGTCTGAACGTGAAGATCAGGTAGAAGGCAACACACTTGCTGTGACAGCGTAGAAAGGGCAGATAGAAAGG-TAGGGAAACAGGTCCTTGGCTTCAGAGCCGTCTCATCTTCCTCGGTTAGGGAAACAGGTCCTTGGCTTCAGAGTCGTCTCCTCTTCCTCATTTCCAGCTGGGTGTCCTGGAGGAAACATTGGTgatctgatggtgggttgcaggacagtggaaggcagaggatgccatgaggatttccagctcatgcgacttgctggaggatggtgaattgaaattagaactcttagagaaagtggtttctgaaaaacaacctgaagatgtacactttttatgtgttgagtttcaaatgctggtaagatattttagttggaaatgccaagtaggtgattga--atatatataatttgggaactctaatgtgtgatctagcctggagggagaacttttggaatcagca---tgcagatgagatttaaagccgtg-ggggtccgtaaaatta---ccctggtagtgGTCTTCTCAATTTAATGCATATTTCTGGCGATTTCTTTTCCCTTACTTCAATCTGCAATTCACCAGGTATAATTggctgagtagtgaccccagagat-- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163925691 641 + 165299245 AGGCAAGACTTG----CTGAATCCTTAAAAACGTCTGAATGTGAAGATCAGGTAGAAGGCAACACGCTTGCTGTGACAGCGTAGAAAGGGCAGATAGAAAGGTTAGGGAAACAGGTCCTTGGCTTCAGAGCCATCTCGTCTTCCTCGGTTAGGGAAACAGGTCCTCAGCTTCAGAGTCGTCTCCTCTTCCTCATTTCCAGCTGAGTGTCCTGGAGGAAACATTGGTGATCTGATGGTGGGTTGGAGGACAGTGGAAGGCAGAGGATGCTATGAGGATTTCCAGCTCATGCGACTTGCTGGAGGATGGTGAATTGAAATTAGAACTCTTAGAGAAAGTGGTTTCTGAAAAGCAGCCTGAAGATGTACACTTTTTGTGTATTGAGTTTCAAATGCTGGTAAGATATTTTAGTTGGAAATGCCAAGTAGGTgattga--atatatataatttgggAATTCTAATGTGTGATCTAGCCTGGAGGGAGAACTTTTGGAATCAGCA---TGCAGATGAGATTTAAAGCCGTG-GGGGTCCGTAAAATTA---CCCTGGTAGTGGTCTCCTCAATTTAATGCATATTTCTGGTgatttcttttcccttacttCAATCTGCAATTCACCAGGTATAATTGGCTGAGTAGTGACCCCAGAGAT-- i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96711747 597 + 98384682 AGGCATGACTTG----CTGAATCCTTAAAAACATCTGAATGTGAAGATCAGGTAGAAGGCAACACGCTTGCTGTGACAGCGTAGAAAGGGCAGATAGAAAGG----------------------------------------------TTAGGGAAACAGGTCCTTGGCTTCAGAGTCGTCTCCTCTTCCTCATTTCCAGCTGGGTGTCCTGGAGGAAACATTGGTgatctgatggtgggttggaggagagtggaaggtagaggatgccatgaggatttccagctcatgcgacttgctggaggatggtgaattgaaattagaactcttagagaaagtggtttctgaaaaacaacctgaagatgtacactttttgtgtattgagtttcaaatgctggtaagatattttagttggaaataccaagtaggtgattgaatatatatataatttgggaattctaatgtgtgatctagcctggagggagaacttttggaatcagca---tgcagatgagatttaaagccgtg-ggggtctgtaaaattg---ccctggtagtgGTCTTCTCAATTTAACGCATATTTCTGGTGATTTCTTTTCCCTTACTTCAATCTGCAATTCACCAGGTATAATTggctgagtagtgaccccagagat-- i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169920095 571 + 171630274 AGGCATGAGTTG----CTAAAGCC-TAAACACATCTGAAGTTAAAGATCAGGCAGAAAGCAACACACCTGCTCTGACGACGCAGA----GCAGATGGAAAGC----------------------------------------------TCAGGAAAAGAGGCGCTCGGCTTCAGAGTGGGCTTCTGGTCCTGATTTCCAGCTGGGTGGCCTGGACGAGAtgctggtgatctgacggtgggttggaggaggagggagtggggaggatggctcgaggatttccagctcgggtgacttggcggggaatggtgaattgaaactagaactcttagagaaagcggtttttgaaaaaccacattaaggtgtacacattctgtgcactgactttcgaatgctggtaagatattttagctggaattgcccaataggtgattgt--atataaatgatttgggaattctaatgtatgttctgggctggagggagaactttcgaaat-------------------TTAAAAGCCGTG-GGAACCCATAGAATTA--CCCCTGGTAGTGGTCTTCCTAATTTAATGCATATTCCTGGCGAT---TTTTCCCCGACTTCAATTTACAATTCACCAGATATAATTGGCTCa-tagtgaccccaaagat-- i calJac3.chr4 C 0 C 0 s canFam3.chr1 56199521 495 + 122678785 -----TGACATGGGAACGAAATCCCTAAAATCACC------------TCAGGTAGAAGATAAACTGCTTGCTGTGAATACATAGAAGGAACAAATAGGTGCA------------------------------------------------AGAAGGAGAGCTGTTCCACAACAA-----------CCCCATGATTCCCACCTGAATCTACAA--------------GGTCTGATGATGGGTTGGAGGAAGGGGGATGACAGAGCGTG---------------------GTGACATG-----------------GAAACAAGGCCTGTGAGGGGATGTGGCTGGAGAAGAACAGCACAgagatgtgca---------------------------ggtgagacattttgatgggagagttcaaacaggtgagtaa--ctatacatggcctgggggctgtgcagcatgctctgggttggggaggaa---tgtggagtcagcagcctgcaagtgagatcgaaagccatgagGAGTGCACAAAACCCCACCCCCTGCAATGGTTCTGCTGATTTAATGTGTATTTCTGGGCATTTCCTCTTCCTTATCCCATCTTGTAATTCAGCAGGTATAGTGGACTGATTGGTGGCTCTGAAGAT-A i canFam3.chr1 C 0 I 101 a score=597357.000000 s hg38.chr6_KB021644v2_alt 134376 201 + 185823 acgtgcaggccggcatccttggaacctgggaatgtgagtttgtttggaaagatgggatt--aagtttaggatcttgagatgaggtcatcctgggtc--ctttt--------------ataagcagtgtccttataaaagagaggcagggattt--agacacccagagaagcggagggaatatgaggacaaaggcCATGTGCTGAGAAAAACCAGTGCGAGA s panTro4.chr6 170722497 217 + 172623881 acgtgcaggccggcatccttggaacctgggaatgtgagtttgtttggaaagatgggatt--aagttcaggatcttgagatgaggtcatcctgggtcatctgttgagccccagatccaaggagcagtgtccttataaaagagaggcggggattt--agacacccagagaagcggagggaatatgaggacaaaggcCATGTGCTGAGAAAAACCAGTGCGAGA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172477063 218 + 174210431 acgtgcaggccggcatccttggaacctgcgaatgtgagtttgtttggaaagatgggatgaaaagttcaggatcttgagatgaggtcatcctgggtcatctgttgggccccagatccaaggagcagtgtccttataaaagagaggcagggattt--agacacccagagaagcggagggaatgtgaggacaaaGATCATATG-TGAGAAAAACCCGCGCGAGG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156336530 215 + 157873769 --gtgcaggccggcatccttggaacccgggaatgtgagtttgtttggaaagatgggatt--aagttcaggatcttgagatgaggtcatcccgggtcatctgttgggccccagatccaaggagcagtgtccctataaaagagaggcagggattt--agacacccagagaagtggagggaatgtgaggacaaaggcCATATGCTGAGAAAAACCCGTGCGAGA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168153283 217 + 169853907 gcatgcaggccagcatccttggaacctgggaatgtgagtttgtttggaaagatgggatt--aagttcaggatcttgagatgaggtcatcctgggtcatctgttggacctcagatccaaggagcagtgtccttataaaagagaggcaggcattt--agacacccagagaagtggagggaatgtgaggacaaaggcCATGTGCTGAGAAAAGCCCACAGGAGA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169108247 217 - 170955103 gcatgcaggccagcatccttggaacctgggaatgtgagtttgtttggaaagatgggatt--aagttcaggatcttgagatgaggtcatcctgggtcatctgttggacctcagatccaaggagcagtgtccttataaaagagaggcaggcattt--agacacccagagaagtggagggaatgtgaggacaaaggcCATGTGCTGAGAAAAGCCCACGCGAGA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163926332 217 + 165299245 GCATGCAGGCCAGCATCCTTGGAACCTGGGAATGTGAGTTTGTTTGGAAAGATGGGATT--AAGTtcaggatcttgagatgaggtcATCCTGGGTCATCTGTTGGACCTCAGATCCAAGGAGCAGTGTCCTTGTAAAAGAGAGGCAGGCATTT--AGACACCCAGAGAAGTGGAGGGAATGTGAGGACAAACGCCATGTGCTGAGAAAAGCCCACAGGAGA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96712344 216 + 98384682 gcatgcaggccagcatccttggaacctgggaatgtgagtttgtttggaaagatgggatt--aagttcaggatcttgagatgaggtcatcctgggccatctgttgggcctcagatccaaggagcagtgtccttataaaagagaggcaggca-tt--agacacccagagaagtggagggaatgtgaggacaaaggcCATGTGCTGAGAAAAGCCCACGAGAGA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169920666 205 + 171630274 acgtgcaagttatcacccttggaacttgggggtgtgattttatttggaaacatgtgagt--aagttgaggatcttgagatgaggtcatcctgggtcatctgt------------ccaaggaccagcgtccttataaaagagaggcaggTGTCTGAAGACACCCGGGGAAGTGGAGGGGA--TGAGGACCAAGGCAGTGTGCTGAGAAAAGCCAGTGTGAGA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56200016 101 + 122678785 I a score=24741.000000 s hg38.chr6_KB021644v2_alt 134577 12 + 185823 ACGCTGGCTGCT s panTro4.chr6 170722714 12 + 172623881 ACGCTGGCTGCC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172477281 12 + 174210431 ACGCTGGCTGCC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156336745 12 + 157873769 ATGCTGGCTGCT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168153500 12 + 169853907 ATGCTGGCAGCT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169108464 12 - 170955103 ATGCTGGCAGCT i macFas5.chr4 C 0 I 6 s papAnu2.chr4 163926549 12 + 165299245 ATGCTGGCAGCT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96712560 12 + 98384682 ATGCTGGCAACT i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169920871 0 + 171630274 C e canFam3.chr1 56200016 101 + 122678785 I a score=5386.000000 s hg38.chr6_KB021644v2_alt 134589 6 + 185823 GCAGGG s panTro4.chr6 170722726 6 + 172623881 GCaggg i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172477293 6 + 174210431 ACaggg i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156336757 6 + 157873769 GCAGGG i nomLeu3.chr3 C 0 C 0 s chlSab2.chr13 96712572 6 + 98384682 GCAGGG i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169920871 0 + 171630274 C e canFam3.chr1 56200016 101 + 122678785 I e papAnu2.chr4 163926561 0 + 165299245 C e rheMac3.chr4 168153512 0 + 169853907 C e macFas5.chr4 169108476 6 - 170955103 I a score=9054.000000 s hg38.chr6_KB021644v2_alt 134595 40 + 185823 GTGAGAAGAGGAGGGAAGCAGGGGCGAGAAGAGGAGGGAA------------------------------- s panTro4.chr6 170722732 17 + 172623881 gt-----------------------gagaagaggagggaa------------------------------- i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172477299 40 + 174210431 gtgagaagaggagggaagcaggggtgagaagaggagggaa------------------------------- i ponAbe2.chr6 C 0 I 206 s nomLeu3.chr3 156336763 35 + 157873769 GT-----gaggagggaagcaggggtgagaagaggagggaa------------------------------- i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169108482 48 - 170955103 -----------------------GTGAGAAGAGGAGGGAAGGGGCTCCCTCCTGACCCCGGGGGGAGTGCG i macFas5.chr4 I 6 C 0 e calJac3.chr4 169920871 0 + 171630274 C e canFam3.chr1 56200016 101 + 122678785 I e chlSab2.chr13 96712578 0 + 98384682 C e papAnu2.chr4 163926561 0 + 165299245 C e rheMac3.chr4 168153512 0 + 169853907 C a score=14073.000000 s hg38.chr6_KB021644v2_alt 134635 43 + 185823 ---------------GCAGGGGTGAGAAGAGGAGGGAAGTAGGGGTGAGAA---GAGGGAA s panTro4.chr6 170722749 43 + 172623881 ---------------acaggggtgagaagaggagggaagtaggggtgagaa---gagggaa i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172477545 46 + 174210431 ---------------GCaggggtgagaagaggagggaagcaggggtgagaagaggagggaa i ponAbe2.chr6 I 206 C 0 s nomLeu3.chr3 156336798 36 + 157873769 ---------------gcaggggtgagaagaggagggaagcaggggtgagaa---------- i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169108530 35 - 170955103 GCCCTGCTGGAAACCACAGGGGTGAGAAGAGGAGG-------------------------- i macFas5.chr4 C 0 I 3 s chlSab2.chr13 96712578 8 + 98384682 ---------------------GTGAGAAG-------------------------------- i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169920871 0 + 171630274 C e canFam3.chr1 56200016 101 + 122678785 I e papAnu2.chr4 163926561 0 + 165299245 C e rheMac3.chr4 168153512 0 + 169853907 C a score=4365.000000 s hg38.chr6_KB021644v2_alt 134678 3 + 185823 GCA s panTro4.chr6 170722792 3 + 172623881 gca i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172477591 3 + 174210431 gca i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168153512 3 + 169853907 GCA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169108568 3 - 170955103 GCA i macFas5.chr4 I 3 T 92 s papAnu2.chr4 163926561 3 + 165299245 GCA i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169920871 0 + 171630274 C e canFam3.chr1 56200016 101 + 122678785 I e chlSab2.chr13 96712586 0 + 98384682 C e nomLeu3.chr3 156336834 0 + 157873769 C a score=78415.000000 s hg38.chr6_KB021644v2_alt 134681 39 + 185823 GGAGTGAGAAGAGGAGGGAAGGGGCTCTCTCCTGACCCC s panTro4.chr6 170722795 39 + 172623881 ggagtgagaagaggagggaaggggCTCTCTCCCAACCCC i panTro4.chr6 C 0 I 628 s ponAbe2.chr6 172477594 39 + 174210431 gaggtgagaagaggagggaaggggCTCTCTCCCGACCCC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156336834 29 + 157873769 ----------gaggaggGAAGGGGCTCTCTCCCAACCCC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168153515 39 + 169853907 GGGGTGAGAAGAGGAGGGAAGGGGCTCCCTCCTGACCCC i rheMac3.chr4 C 0 I 1 s macFas5.chr4 169108479 39 - 170955103 GGGGTGAGAAGAGGAGGGAAGGGGCTCCCTCCTGACCCC i macFas5.chr4 T 92 I 1 s papAnu2.chr4 163926564 39 + 165299245 GGGgtgagaagaggagggaaggggctCCCTCCTGACCCC i papAnu2.chr4 C 0 I 1 s chlSab2.chr13 96712586 28 + 98384682 -----------AGGAGGGAAGGCGCTCCCTCCTGACCCA i chlSab2.chr13 C 0 I 1 e calJac3.chr4 169920871 0 + 171630274 C e canFam3.chr1 56200016 101 + 122678785 I a score=72685.000000 s hg38.chr6_KB021644v2_alt 134720 46 + 185823 AGGGGAGTGCGGCCCTGCTGGCAGCCGCAAGGGTGAGAAGAGGAGG s ponAbe2.chr6 172477633 45 + 174210431 GGGGGAGTGCGTCCCTGCTGGCAGCCCCA-GGGTGAGAAGAGGAAG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156336863 43 + 157873769 AGGGGAGTGCGGCCCTGCTGGCAGCCACAGGGGTGAGAAGAGG--- i nomLeu3.chr3 C 0 I 266 s rheMac3.chr4 168153555 46 + 169853907 GGGGGAGTGCAGCCCTGCTGGAAGCCACAGGGGTGAGAAGAGGAGG i rheMac3.chr4 I 1 C 0 s macFas5.chr4 169108519 46 - 170955103 GGGGGAGTGCGGCCCTGCTGGAAACCACAGGGGTGAGAAGAGGAGG i macFas5.chr4 I 1 C 0 s papAnu2.chr4 163926604 46 + 165299245 GGGGGAGTGCGGACCTGCTGGAAACCACAGGGGTGAGAAGAGGAGG i papAnu2.chr4 I 1 C 0 s chlSab2.chr13 96712615 46 + 98384682 GGGGGAGTGCAGCCCTGCTGGAAGCCACAGGGGTGAGTAGAGGAGG i chlSab2.chr13 I 1 C 0 e calJac3.chr4 169920871 0 + 171630274 C e canFam3.chr1 56200016 101 + 122678785 I e panTro4.chr6 170722834 628 + 172623881 I a score=5922.000000 s hg38.chr6_KB021644v2_alt 134766 3 + 185823 GAA s ponAbe2.chr6 172477678 3 + 174210431 GAA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156337172 3 + 157873769 GAA i nomLeu3.chr3 I 266 C 0 s rheMac3.chr4 168153601 3 + 169853907 GAA i rheMac3.chr4 C 0 T 92 s macFas5.chr4 169108565 3 - 170955103 GAA i macFas5.chr4 C 0 T 92 s papAnu2.chr4 163926650 3 + 165299245 GAA i papAnu2.chr4 C 0 T 92 s chlSab2.chr13 96712661 3 + 98384682 GAA i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169920871 0 + 171630274 C e canFam3.chr1 56200016 101 + 122678785 I e panTro4.chr6 170722834 628 + 172623881 I a score=116427.000000 s hg38.chr6_KB021644v2_alt 134769 65 + 185823 GCAGGGGTGAGAAGAGGAGGGAAGGGGCTCCCTCCTGACCCCAGGGGGAGTGCAGCCATGCTGGC s ponAbe2.chr6 172477681 65 + 174210431 GCAGGGGTGAGAAGAGGAGGGAAGGGGCTCCCTCCTGACCCCAGGGGGAGTGCAGCCATGCTGGC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156337175 65 + 157873769 GCAGCGGTgagaagaggaaggaataggctctctccccaccccagggggagtgcggccctgctggc i nomLeu3.chr3 C 0 T 180 s rheMac3.chr4 168153512 65 + 169853907 GCAGGGGTGAGAAGAGGAGGGAAGGGGCTCCCTCCTGACCCCGGGGGGAGTGCAGCCCTGCTGGA i rheMac3.chr4 T 92 C 0 s macFas5.chr4 169108476 65 - 170955103 GCAGGGGTGAGAAGAGGAGGGAAGGGGCTCCCTCCTGACCCCGGGGGGAGTGCGGCCCTGCTGGA i macFas5.chr4 T 92 C 0 s papAnu2.chr4 163926561 65 + 165299245 GCAGGGgtgagaagaggagggaaggggctCCCTCCTGACCCCGGGGGGAGTGCGGACCTGCTGGA i papAnu2.chr4 T 92 C 0 s chlSab2.chr13 96712664 65 + 98384682 GCAGGGGTGAGAAGAGGAAGGAAGGGGCTCCCTCCTGACCCCGGGGGGAGTGCAGCCCTGCTGGC i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169920871 0 + 171630274 C e canFam3.chr1 56200016 101 + 122678785 I e panTro4.chr6 170722834 628 + 172623881 I a score=72386.000000 s hg38.chr6_KB021644v2_alt 134834 44 + 185823 AGCCGCAGGAGTGAGAAGAG---GGAAGCAGGGGTgagaagaggaag s ponAbe2.chr6 172477746 44 + 174210431 AGCGGCAGGAGTGAGAAGAG---GGAAGCAGGGGTgagaagaggaag i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156337060 46 + 157873769 AGCCCCAGG-GTGAAAAGAGGAAGGAAGCAGGGGTGAGAAGAGGAGG i nomLeu3.chr3 T 180 C 0 s rheMac3.chr4 168153577 47 + 169853907 AGCCACAGGGGTGAGAAGAGGAGGGAAGCAGGGGTAAGAAGAGGAGG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169108541 47 - 170955103 AACCACAGGGGTGAGAAGAGGAGGGAAGCAGGGGTAAGAAGAGGAAG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163926626 47 + 165299245 AACCACAGGGGTGAGAAGAGGAGGGAAGCAGGGGTaagaagaggaag i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96712729 47 + 98384682 AGCCACAGGGGTGAGAAGAGGAGGGAAGCAGCGGTAAGAAGAGGAAG i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169920871 0 + 171630274 C e canFam3.chr1 56200016 101 + 122678785 I e panTro4.chr6 170722834 628 + 172623881 I a score=79751.000000 s hg38.chr6_KB021644v2_alt 134878 45 + 185823 gaatagactctctccccaccctggggggagtgcggccctgctggc s ponAbe2.chr6 172477790 45 + 174210431 gaataggctctctccccaccccgaggggagtgcggccctgctggc i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156337106 45 + 157873769 GAAGGGGCTCCCTCCTGACCCCAGGGGAAGTGTGGCCCTGCTGGC i nomLeu3.chr3 C 0 I 278 s rheMac3.chr4 168153624 45 + 169853907 GAATGGGCTCTCTCCCGACCCTGGGGGTAGAGTGGCCATGCTGAc i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169108588 45 - 170955103 GAATGGGCTCTCTCCCGACCCTGGGGGTAGTGTGGCCATGCTGAc i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163926673 45 + 165299245 gaatgggTTCTCTCCCGACCCTGGGGGTAGTGTGGCCATACTGAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96712776 45 + 98384682 GAATGGATTCCCTCCCGACCCTGGGGGTAGTGTGGCCATGCTGAc i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169920871 40 + 171630274 GAAAGGGCTCTCTCCCGACCCCCGGGGTG----GGccctg-tatc i calJac3.chr4 C 0 C 0 e canFam3.chr1 56200016 101 + 122678785 I e panTro4.chr6 170722834 628 + 172623881 I a score=118329.000000 s hg38.chr6_KB021644v2_alt 134923 67 + 185823 tggcacctccgtccctggctttccccctccagaacggcgaggcaatggatttgtgttgtttaagcca s ponAbe2.chr6 172477835 67 + 174210431 tggcacctccgtccctggctttccccctccagaatggcaaggcaatggatttgtgttgtttaagcca i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168153669 67 + 169853907 tgacacctccgtccctggctttccccctccagaatggcgaggcaatggatttgtgttgtttaagcca i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169108633 67 - 170955103 tgacacctccgtccctggctttccccctccagaatggcgaggcaatggatttgtgttgtttaagcca i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163926718 67 + 165299245 TGACACCTCCGTCCCTGGCTTTCCCCCTCCAGAATGGCGAGGCAATGgatttgtgttgtttaagcca i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96712821 67 + 98384682 tgacacctccgtccctggctttccccctccggaacggcgaggcaatggatttgtgttgtttaagcca i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169920911 67 + 171630274 tggcacctcgggccccagctttccgcctccagggctgcgaggcgagggatttgtgtggcttaagcca i calJac3.chr4 C 0 C 0 e canFam3.chr1 56200016 101 + 122678785 I e nomLeu3.chr3 156337151 278 + 157873769 I e panTro4.chr6 170722834 628 + 172623881 I a score=114869.000000 s hg38.chr6_KB021644v2_alt 134990 50 + 185823 ataaagttgtgtaatttgttcttggcaatactagaaattcatataCCAGC s panTro4.chr6 170723462 50 + 172623881 ATAAAGTTGTGTAATTTGTTCTTGGCAATACTTTAAATTCACATACCAGC i panTro4.chr6 I 628 C 0 s ponAbe2.chr6 172477902 50 + 174210431 ataaagttgtgtaatttgttcttggcaatactagaaattcatataCCAGC i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168153736 50 + 169853907 ataaagttgtgtaatttgttcttggcaatactagaaactcatataCCAGC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169108700 50 - 170955103 ataaagttgtgtaatttgttcttggcaatactagaaactcatataCCAGC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163926785 50 + 165299245 ataAAGTTGTGTAATTTGTTCTTGGCAATACTAGAAACTCATATACCAGC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96712888 50 + 98384682 ataaagttgtgtaatttgttcttggcaatactagaaactcatataCCAGC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169920978 48 + 171630274 atagctttgtgtaacttgttcttggcagcactagaaactc--atacCAGC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56200016 101 + 122678785 I e nomLeu3.chr3 156337151 278 + 157873769 I a score=198081.000000 s hg38.chr6_KB021644v2_alt 135040 71 + 185823 TACCAAGTAGGGCCTGGAAGTCCTTATTTTAAGCCGGAACCCCAGGTGATCCTGGTTAGTGGATCACCGTT s panTro4.chr6 170723512 71 + 172623881 TACCAAGTAGGGTCTGGAAGTCCTTAGTTTAAGCCGGAACCCCAGGTGATCCTGGTTAGTGGATCACCgtt i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172477952 71 + 174210431 TACCAAgtagggcctggaagtccttattttaaaccagaaccccaggtgatcctggttggtggatcactgtt i ponAbe2.chr6 C 0 I 1 s rheMac3.chr4 168153786 71 + 169853907 TACCAAGTAGGGTCTGAAAGTCCTTATTTTAAACTAGAACCCCAGGTGATACTGGTTAGTGGATCACCGTT i rheMac3.chr4 C 0 I 1 s macFas5.chr4 169108750 71 - 170955103 TACCAAGTAGGGTCTGGAAGTCCTTATTTTAAACCAGAACCCCAGGTGATACTGGTTAGTGGATCACCGTT i macFas5.chr4 C 0 I 1 s papAnu2.chr4 163926835 71 + 165299245 TACCAAGTAGGGTCTGGAAGTCCTTATTTTAAACCAGAACCCCAGGTGATACTGGTTAGTGGATCATCGTT i papAnu2.chr4 C 0 I 1 s chlSab2.chr13 96712938 71 + 98384682 TACCAAGTAGGGTCTGGAAGTCCTTATTTTAAACCAGAACCCCAGGTGATACTGGTTAGTGGATCGCCGTT i chlSab2.chr13 C 0 I 1 s calJac3.chr4 169921026 71 + 171630274 TACCAAgcaggatctggaagtctttattttcaaccagaaccccaggtgctcttggttagtggatcacggtt i calJac3.chr4 C 0 I 1 s canFam3.chr1 56200117 71 + 122678785 TGCTGAGTAGGATCCGGAAATCTTCATTTTAAACCAAAATACTAGGTGGTCCTGGTTTGTAGATCACATTT i canFam3.chr1 I 101 C 0 e nomLeu3.chr3 156337151 278 + 157873769 I a score=1693250.000000 s hg38.chr6_KB021644v2_alt 135111 526 + 185823 AAGAAACGCTGACCTAGGGCGATACTACATGACTGAGTTTTGAAGGGTATCAGAATTAAACATTTagtaggagagaaaaagcggctccaggacttgggaggcccgagatgagacacagagagaaacagtacttggctcctaggttgtttttgtctgactccagtcgcataattgcacattggaaaAACAGTCTGGAAATGACGGGATTTGCATCGTG-TTTTCAGTTCGTCAAGCGTCTTGACTCTGTCTGGATTTGTAACTAAACAATACCAGCAGGTGAGAGTGGTCACACGGAATGAATCACA-AACGATCTTCAAAGGACAAACGTGGTGAATCCTCGAACTGGCAAAGGAAGAAGTAAACTCTGCCCCCGC--AAGCTCGCGCGACGCGACACCGCGG-CCTCTCCTTGGCCCACTCACCACTTGGACGCTCTTCTTCAGGCTGGGAACATGCGCTTCCTCACAGCTGGAGCCATTCCTTCCTCTTCTTCAAAGGATTTTCTGAAATTCCAACCCC-ACTCTGAAAT s panTro4.chr6 170723583 527 + 172623881 aagaaacgctgacctagggcgatactacatgactgagttttgaagggtatcagaattaaacatttagtaggagggaaaaagcggctccaggacttgggaggcccgagatgaggcacagagagaaacagtacttggctcctaggttgtttctgtctgactccagtcgcataattgcacattggaaaAACAGTCTGGAAATGACGGGATTTGCATCGTG-TTTTCAGTTCGTCAAGGGTTTTGACTCTGTCTGGATTTGTAACTAAACAATACCAGCAGGTGAGAGTGGTCACACGGAATGAATCACA-AACGATCTTCAAAGGACAAACGTGGTGAATCCTCGAACTGGCAAAGGAAGAAGTAAACTCTGTCCCCAC--GAGCTCGCGCGACGTGACACCGCGG-CCTCTCCTTGGCCCACTCACCACTTGGACGCTCTTCTTCAGGCTGGGAACATGCGCTTCCTCACAGCTGGAGCCATTCCTTCCTCTTCTTCAAAGGATTTTCTGAAATTCCAACCCCCACTCTGAAAT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172478024 527 + 174210431 aagaaacgctgACCTAGGGCGATACTACATGACTGAGTTTTGAAGGATATCAGAATTAAACATTTAGTAGGAGAGAAAAAGCGGCTCCAGGACTTGGGAGTCTCAAGATGAGACACAGAGAGAAACAGTACTTGGCTCCTAGGTTGTTTTTGTCTGACTCCAGCCACATAATTGCACCTTGGAAAAACAGTCTGGAAATGACTGGATTTGCATCGTG-TTTTCAGTTCGTCAAGCGTTTTGACTCTGTCTGAATTTGTAACTAAACAATACCAGCAGGTGAAAGTGGTCACACGGAATGGAACACA-AACGATCTTCAAAGGACAAACGTGGTGAATCCTCGAACTGGCAAGGGAAGAAGTAAACTCTGCCCCTGC--AAGCTCGCGCGACGCAACACCGCGG-CCCCTCCTTGGCCCACTCACCGCTTGGACGCTCGCTTTCAAGCTGGGAACATGCGCTTCCTCACAGCTGGAGCCATTCCTTCCTCTTCTTCAAAGGATTTTCTGAAATTCCAACCCCCACTCTGAAAT i ponAbe2.chr6 I 1 I 2 s nomLeu3.chr3 156337429 527 + 157873769 AAGCAACGCTGACCTAGGGCGATACTACGTGACTGAGTTTCGAAGGGCATCAGAATTAAACATTTagtaggagagaaacagcggctccaggacttgggaggcccaagatgagacacagagagaaacagtacttggctcctaggttgtttttgtctGACTCCAGCCATATAATTGCACCTTGGAAAAACAGTCTGGAAATGACTGGATGTGCATCGTG-TTTTCAGTTCTTCAAGCGTTTTGACTCTGTCTGGATTTGTAACTAAACAATACCAGCAGGTGAAAGTGGTCACACGGAATGAAACACA-AACGATCTTCAAAGGACAAACGTGGTGAATCCTGGAACTGGCAAAGGAAGAAGTAAACTCTGCGCCCGC--CAGCTCGCACGATGCGACACCGCAG-CCCCTCCTTGGCCCACTCGCCACTTGGACGCTCGCTTTCAAGCTGGGAACATGCGCTTCCTCACAGCTGGAGCCATTCCTTCCTCTTCTTCAAAGGAGTTTCTGAAATTCCAACCCCCACTCTGAAAT i nomLeu3.chr3 I 278 I 2 s rheMac3.chr4 168153858 528 + 169853907 AAGAAATGCTGACCTAGGGAGATACTACACGATTAAGTTTTGAAGGGCATCAGAATTAAACATTTAGGAGGAGAGAAAAAGAGGCTCCAGGACTTGCGAGGCCCAAGATGAGACACAGAGAGAAACAGTACTTGGCTCCTAGGCTGTTTTTGTCTGACTCCAGCCACATAATTGCCCCTTGGAAAAACAGTCTGGAAATGACTGGGTTTGCATCGTGTTTTTCTGTTCTTCAAGCGTTTTGACTCTGTCTGGATTTGTAACTAAACAATACCAGCAGGTGAAAGCGGTCACACGGACTGAAACCCA-AACGATCTTCAAAGGACAAACGTGGTGAATCCTCAAACTGGCAAAGGAAGAAGTAAACTCTGGCCCCGC--AAGCTCACGCGATGTGACACCGCGG-CCCCTCCTTGGCGCACTTGCCACTTGGACGCTCTTTTTCAAGCTGGGAACATGCGCTTCCTCACAGCTGGAGCCATTCCTTCCGCTTCTTCAAAGGATTTTCTGAAATTCCAACCCCCACTCTGAAAT i rheMac3.chr4 I 1 I 308 s macFas5.chr4 169108822 528 - 170955103 AAGAAATGCTGACCTAGGGAGATACTACACGATTAAGTTTTGAAGGGCATCAGAATTAAACATTTAGGAGGAGAGAAAAAGCAGCTCCAGGACTTGCGAGGCCCAAGATGAGACACAGAGAGAAACAGTACTTGGCTCCTAGGCTGTTTTTGTCTGACTCCAGCCACATAATTGCCCCTTGGAAAAACAGTCTGGAAATGACTGGGTTTGCATCGTGTTTTTCTGTTCTTCAAGCGTTTTGACTCTGTCTGGATTTGTAACTAAACAATACCAGCAGGTGAAAGCGGTCACACGGACTGAAACCCA-AACGATCTTCAAAGGACAAACGTGGTGAATCCTCAAACTGGCAAAGGAAGAAGTAAACTCTGGCCCCGC--AAGCTCACGCGACGTGACACCGCGG-CCCCTCCTTGGCCCACTTGCCACTTGGACGCTCTTTTTCAAGCTGGGAACATGCGCTTCCTCACAGCTGGAGCCATTCCTTCCGCTTCTTCAAAGGATTTTCTGAAATTCCAACCCCCACTCTGAAAT i macFas5.chr4 I 1 I 2 s papAnu2.chr4 163926907 527 + 165299245 AAGAAACGCTGACCTAGGGAGATACTACACGATTAAGTTTTGAAGGGCATCAGAATTAAACATTTAGGAGGAGAGAAAAAGCGGCTCCAGGACTTGCGAGGCCCAagatgagacacagagagaaacagtACTTGGCTCCTAGGCTGTTTTTGTCTGACTCCAGCCACATAATTGCCCTTTGGAAAAACAGTCTGGAAATGACTGGGTTTGCATCGTG-TTTTCTGTTCTTCAAGCGTTTTGACTCTGTCTGGATTTGTAACTAAACAATACCAGCAGGTGAAAGCGGTCACACGGACTGAAACCCA-AACGATCTTCAAAGGACAAACGTGGTGAATCCTCAAACTGGCAGAGGAAGAAGTAAACTCTGGCCCCGC--AAGCTCACGCGACGTGACACCGCGG-CCCCTCCTTGGCCCACTTGCCACTTGGACGCTCTTTTTCAAGCTGGGAACATGCGCTTCCTCACAGCTGGAGCCATTCCTTCCGCTTCTTCAAAGGATTTTCTGAAATTCCAACCCCCACTCTGAAAT i papAnu2.chr4 I 1 I 2 s chlSab2.chr13 96713010 527 + 98384682 AGGAAACGCTGACCTAGGGAGATATTACACGATTAAGTTTTGAAGGGCATCAGAATTAAACATTTAGGAGGAGAGAAAAAGCAGCTCCAGGACTTGCGAGGCCCAAGATGAGACACAGAGAGAAACAGTACTTGGCTCCTAGGCTGTTTTTGTCTGACTCCAGCCACATAATTGCACCTTGGAAAAACAGTCTGGAAATGACTGGGTTTGCATCGTG-TTTTCTGTTCTTCAAGCGTTTTGACTCTGTCTGGATTTGTAACTAAACAATACCAGCAGGTGAAAGCGGTCACACGGACTGAAACCCA-AACGATCTTCAAAGGACAAACGTGGTGAATCCTCGAACTGGCAAAGGAAGAAGTAAACTCTGGCCCCAC--AAGCTCACGCGACGTGACACCGCGG-CCCCTCCTTGGCCCACTTGCCACTTGGACGCTCTTTTTCAAGCTGGGAACATGCGCTTCCTCACAGCTGGAGCCATTCCTTCCGCTTCTTCAAAGGATTTTCTGAAATTCCAACCCCCACTCTGAAAT i chlSab2.chr13 I 1 I 2 s calJac3.chr4 169921098 507 + 171630274 gagaaacactgCCGTAAGGAGACACCACATTACTGGGTCTTGAAGGGCACCAGAAGCAGAGATTTAGTAGGAGAGAAAAAGCAGCTCCAGGACTTGGGAGGC-CGAGACGAGACACAGATAAAGACAGAACTTGGCTCC-AGGTTGTTTTCGTCTGACTGCAGCCACAGAGTTGCACCTTGG-AGAACAGTCTGGAAGCGACTGGATTTGCACCGCG-TTTCCAGTGCTTCAGGCGTCCTGACTCTGTCTGACTTTGTAACTAAACAATACCAGGGGGTGAAAGAGGTCACTTGGAATGAAAC-CA-GGCGGTCTTCAAAGGACGAGTGTGTTAAACCCTCGTACTGGCAAGGGAAGAAGGAAACCCACGCCACGC--CA----------------ACCGCGGTCCCCTCCTTGGCCCACTCACCGCTTGGATGCCATTTGTCAAGCAGGGAACATGTTCTTCCTCACAGCTGGAGCCATTCCTGCCTCTTCTTTAAAGGACTTTCTGAAATTCCAGCCCG-GCTCTGAAAT i calJac3.chr4 I 1 I 2 s canFam3.chr1 56200188 517 + 122678785 GGGAAATTTGGACCCAGGATGATGCT--GTGATGGGAATTTGAGGAGCATCAGAATCACAGACTTAGAAGGGAAGAGTGTCCGGGTGCTGG----GGGAGGCACACAATGAGCCG-GGAGAAAAAGAGTGTTTGGCTTCTGAGTTGTTTTCGTCTGGCTGCA-CCACATAATTGCACCTCAG-AAAACGGTCCAGAAGTGATTAGATTTGCATAATGTTTTTCAGCTCTTCAAGCTTTATGCCTCTGTCTCAGTTTGTAACTAAACATTCCCAGCAGGTGGAAATGCTC-CTTGGAACGAAACCCAGGATGATCTTCAGAAGGCTAACGTGGTGCATTCCTGTGCTGGCAAAGGAAGAAGGAAAAGCTGCACGAGCTGAAGTTCAGGCCACTGAGTCCCTTGG-TCCCTCACTGCCCACCATGACTCC---AAGCTCCTTTT-AAGCCTGGAACATGCTCTTTATCCCAGCTGGGTGCATTCCTTTCCTTTCTTCAAAGGATTTCTTGGCATTCTAACCACCAATCTGAAAT i canFam3.chr1 C 0 I 2 a score=810879.000000 s hg38.chr6_KB021644v2_alt 135637 309 + 185823 TGTTTAATAAA----CTATCACAGTTTCACCTTCTCACCC-TTCCACATGAGTAGCCTCTCTCCAGTAAGACTTGGCCCTAAAGGTGGGTGCTTTGACC-----TGAGTGTC----TACGCCAGGGCAGCGCCGGGG------------------GCAGACAGAACC-----------ACCTGCCCTGAGCTCCCGGCTCACTGGTCTCCATGCCTCGTTGGGGGCGAGACTGCGGACTTTAATCTTCTATCTTTGAATTTTCCCTGGATCCAAGCTGGGCTGCACTGCAATGCTCCTTGCC-CTCCTTCCTGAAACAGCTCATCTTTGTCCTGGAAAAATGTCATGCTTGAG s panTro4.chr6 170724110 298 + 172623881 TGTTTAATAAA----CTATCACAGTTTCACCTTCTCACCC-TTCCACATGAGTAGCCTCTCTCCAGTAAGACTTGGCCCTAAAGGTGGGTGCTTTGACC-----TGAGTGTC----TATGCC-----------GGGG------------------GCAGACAGAACC-----------ACCCGCCCTGAGCTCCCTGTTCACTGGTCTCCATGCCTCGTTGGGGGCGAGACTGCGGACTTTAATCTTCTATCTTTGAATTTTCCCTGGATCCAAGCTGGACTGCACTGCAATGCTCCTTGCC-CTCCTTCCTGAAACAGCTCATCTTTGTCCTGGAAAAATGTCATGCTGGAG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172478553 309 + 174210431 TGTTTAATAAA----CTATCACAGTTTCACCTTCTCACCC-TTCCACATGAGTAGCCTCTCTCCAGTAAGACTTGTCCCTAAAGGTGGGTGCTTTGACC-----TGAGTTTC----TATACCAGGGCAACGCCGGGG------------------GCAGACAGAACC-----------ACCCGCCCTGCGCTCCCTGCTCACTGGTCTCCATGCCTGGTTGGGGGCGAGACTGCGGACTTTAATCTTCTGTCTTCGAATTTTCCCTGGATCCAAGCTGGACTGCACTGCAATGCTCCTTGCT-CTCCTTCCTGAAACAGCTCATCTTTGTCTTGGAAAAATGTCATGCTTGAG i ponAbe2.chr6 I 2 C 0 s nomLeu3.chr3 156337958 310 + 157873769 TGTTTAATAAA----CTATCACAGTTTCACCTTCTCACCCTTTCCATATGAGTAGCCTCTCTCCAGTAAGACTTGTCCCTAAAGGTGGGTGCTTTGACC-----TGAGTTTC----TATGCCAGGGCAACGCCGGGG------------------GCAGACAGAACC-----------ACCTGCCCTGAGCTCCCTGCTCACTGGTCTCCATGCCTCGTTGGGGGAGAGACTGGGGACTTTAATCTTCTATCTTCGAATTTTCCTTGGATCCAAGCTGGACTGCATTGCAATGCTCCTTGCC-CTCCTTCCTGAAACAGCTCATCTTTGTCCTGTAAAAATGTCATGCTTGAG i nomLeu3.chr3 I 2 C 0 s rheMac3.chr4 168154694 305 + 169853907 TGTTTAATAAA----CTACCACAGTTTCACCTTCTCACCC-TTCCACATGAGTAGC--CTCTCCAGTAAGACTTGTCCCTAAAGTTGGGGGCTTTGACC-----TGAGTTTC----TACACCAGGGGAGCAC-TGGG------------------GCAGACAGGACC-----------ACCCACCCTAAGTGACCTGCTCACT-GTCTTGATGCCTTGTTCGGGGCGAGACTGGTGACTTTTATCTTCTATCTTCAAATTTTCCCTGGATCCAAGCTGGACTGCATAGCAATGCTCCCTGCC-CTCCTTCCTGAAACAGCTCATCTTTGTCCTGGAAAAATGTCACACTTGAG i rheMac3.chr4 I 308 C 0 s macFas5.chr4 169109352 305 - 170955103 TGTTTAATAAA----CTACAATAGTTTCACCTTCTCACCC-TTCCACACGAGTAGC--CTCTCCAGTAAGACTTGTCCCTAAAGTTGGCGGCTTTGACC-----TGAGTTTC----TACGCCAGGGGAACAC-TGGG------------------GCAGACAGGACC-----------ACCCACCCTAAGTGACCTGCTCACT-GTCTCGATGCCTCGTTGGGGGCGAGACTGGTGACTTTAATCTTCTATCTTCAAATTTTCCCTGGATCCAAGCTGGGCTGCATAGCAATGCTCCCTGCC-CTCCTTCCTGAAACAGCTCATCTTTGTCCTGGAAAAATGTCACGCTTGAG i macFas5.chr4 I 2 C 0 s papAnu2.chr4 163927436 305 + 165299245 TGTTTAATAAA----CTACCACAGTTTCACCTTCTCACCC-TTCCACATGAGTAGC--CTCTCCAGTAAGACTTGTCCCTAAAGTTGGCGGCTTTGACC-----TGAGTTTC----TACGCCAGGGGAGCAC-TGGG------------------GCAGATAGAACC-----------ACCCGCCCTAAGCGACCTGCTCACT-GTCTCGATGCCTTGTTGGGGGCGAGACTGGTGACTTTAATCTTCTATCTTCAAATTTTCCCTGGATCCAAGCTGGACTGCATAGCAATGCTCCCTGCC-CTCCTTCCTGAAACAGCTCATCTTTGTCCTGGAAAAATGTCATGCTTGAG i papAnu2.chr4 I 2 C 0 s chlSab2.chr13 96713539 304 + 98384682 TGTTTAATAAA----CTACCACAGTTTCACCTTCTCACCC-TTCCACATGAGTAGC--CTCTCCAGTAAGACTTGTCCCTAAAGTTGGGGGCTTTGACC-----TGAGTTTC----TGCACCAGGGGAATAC-TGGG------------------GCAGACAGAACC-----------ACCCGCCC-AAGTGACCTGCTCACT-GTCTCGATGCCTCGTTGGGGGCGAGACTGGTGACTTTAATCTTCTATCTTCAAATTTTCCCTGGATCCAAGCTGGACTGCATAGCAATGCTCCCTGCC-CTCCTTCCTGAAACAGCTCATCTTTGTCCTGGAAAAATGTCATGCTTGAG i chlSab2.chr13 I 2 C 0 s calJac3.chr4 169921607 286 + 171630274 TGCTTAATAAA----CTCTCACAGTTTCACCCTCTCCCCC-TTCCACATAAGCAGC--TTCTCCTGTAAGGCTTGTCCCTAAAGGTGGGTGCTTTCACC-----TGAGTTAA----AACAACAGGGAAATGC-GGGGTGGGGTGGGGAGTGGGGTGGGAACAGAACC-----------CCGGGCCCTGTGTGCCCTGCCCAC----------------------GGGAGATGGAGGACTTTGATCTTCTGTCATAGACTTTTCCCTTGATACAAGCTGGACCACG------------CTGCG-CTGCTTCCTGAAGCAGGTCCCCTGTGGCCTGGAAAA----TCTGCTCAAG i calJac3.chr4 I 2 C 0 s canFam3.chr1 56200707 329 + 122678785 TGCTTCATAAAATATCTACCACAATCTCACCTTCTCATC--TTCCACATATATGGA--CCTGCAAACAGGACTCGTCCAGAACG-TATATGCTGGGACCTTAAGTAAATCCCAAAGCAAGCCAGAGAGCAGC-TGAT------------------GAAAACGTGACCCCGGGTTTACGACAAACACAAAATGTTAAGGCTCTTGGATTTGATGTGTCTATTTTGACACTGCTGGAGACTGCAATGTTCTATTCTAGAATTTTCCCTTGACCTAAACAAGACTGTGTTGGAATTTGCCTTCCCATTGCTTCTTGAAATACGTCATCATTGGTTTGGAAAAATGTGGTGTTCCAG i canFam3.chr1 I 2 I 3277 a score=1049591.000000 s hg38.chr6_KB021644v2_alt 135946 407 + 185823 GCACTTTGGCCCTTGGGAAGAACAAGAGGGAAGACGGGAACCTCCTTTTTCTGGAGCTCCTACTGCGACT--GGACCTTGCTGGCCGGTCAGTTTCACTCTCTGTTAAGCGCTGATCTGCTCC--------------------------------------GTCTGTGAACCCCTCGTGGATTTTATACATTGGAGAACAGTCTCCTGTTGCACTACTTCTCTTAATTTTCTTAACTCTGTCCTTCATTTAAAAGAAATCCTTAATtctgatgtatcaattatgttaacttttgttctttggcatattatttaaaaagtctttttatcccaaacttac--agatatccttacacgtcttcttataccatctttaacatttttacctttcacatttagggctttcatggatctggcattCACCAGGTGTCATGTGGT-GGAATCCAA--TTTA-- s panTro4.chr6 170724408 444 + 172623881 GCACTTTGGCCCTTGGGAAGCACAAGAGGGAAGGCGGGAACCTCCTTTTTCTGCAGCTCCTACTGCGACT--GGACCTTGTTGGCCGGTCAGTCTCACTCTCTGTTAAGCGCTGATCTGCTCCCGGTCAGTCTCACTCTCTGTTAAGCGCTGATCTGCTCCGTCCGTGAACCCCTCGTGGATTTTATACATTGGAGAACAGTc-cctgttgcattacttctcttaattttcttaactctgtccttcatttaaaagaaatccttaattctgatgtatcaattatgttaacttttgttctttggcatattatttaaaaagtctttttatcccaaacttac--agatatccttacacgtcttcttataccatctttaacatttttacctttcacatttagggctttcatggatctggcattCACCAGGTGTCATGAGGT-GGAATCCAA--TTTA-- i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172478862 407 + 174210431 GCACTTTGGCCCTTGGGAAGAACAAGAGGGAAGACGGGAACCTCCCTTTTCTGGAGCTCCTACCGCGACT--GGGACTTGTTGGCCGGTCAGTTTCACTCTCTCTTAAGCACTGATCTGCTCC--------------------------------------ATATGTGAACCCCTCGTGGATTTTATACATTGGAGAATAGTCTCCTGTTGCATTACTTCTCTTAACTTTCTTAACTCTGTCCTTCATTTAAAAGAAATCCTTAATTTTGATGTATCAATTATGTTAACTTTTGTTCtttggcatattattttaaaagtctttttatcccaaacttac--agatatccttacacgtcttcttataccatctttaacatttttacctctcacatttagggctttcatggatctggcattCACCAGGTGTCATGAGGT-GGAATCGAA--TTTA-- i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156338268 396 + 157873769 GCACTTTGGCCCTTGGGAAGAACAAGAGGGGAGACAGGAACCTCCTTTTTCTGGAGATCCTACCGTGACT--GGCACTT------------GTTTCACTCTCTGTTAAGCACCGATCTGCTCT--------------------------------------GTATGTGAACCCCTCGTGGATTTTATACATTGGAGAATAGTC-TCTGTTGCATTACTTCTCTTAATTTTCTTAACTTTGTCCTTCATTTAAAAGAAATCCTTAATTTTGatgtatcaattattttaacttttgttctttggcatattatttaaaaagtctttttgtcccaaacttac--agatattcttacatgtcttcttataccatctttaacgtttttacctttcacatttagggctttcatggatctggtattcaccaggtgtcatgaggt-gggaatcca--cttaat i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168154999 406 + 169853907 GCACTTTGGCCTTTGGGAGGAACAAGAGGGAAGACGGGAACCTCCTTTTTCTGGAGCTCCTACTCTGACT--AGGACTGGTTGGCCGGTCAGTTTCACTCTCTGTTAAGCACCGATCTGCTCC--------------------------------------GTA-Gtgaacccctcgtggattttatacactggaaaatggtctcttggtacattacttctcttaatgttcttaactttgtccttcacttaaaagaaatccttaattttgaggtatcgattattttaacttttgttctttggcatatgattttaaaagtctttttatcgcaaacttac--agatattcttatacatcttcttatatcatctttaacgtttttacctttcacatttagggctttcatggacctg-cattcaccaagtgttatgaagtgggaatccaa--tttt-- i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169109657 406 - 170955103 GCACTTTGGCCTTTGGGAGGAACAAGAGGGAAGACGGGAACCTCCTTTTTCTGGAGCTCCTACTCTGACT--AGGACTGGTTGGCCGGTCAGTTTCACTCTCTGTTAAGCACGGATCTGCTCC--------------------------------------GTA-Gtgaacccctcgtggattttatacattggaaaatggtctcttggtacattacttctcttaatgttcttaactttgtccttcacttaaaagaaatccttaattttgaggtatcgattattttaacgtttgttctttggcatatgattttaaaagtctttttatcccaaacttac--agatattcttatacatcttcttatatcatctttaacgtttttacctttcacatttagggctttcatggacctg-cattcaccaagtgttatgaagtgggaatccaa--tttt-- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163927741 409 + 165299245 GCACTTTGGCCTTTGGGAGGAACAAGAGGGAAGACGGGAGCCTCCTTTTTCTGGAGCTCCTACCCTGACT--AGGACTGGTTGGCCGGTCAGTTTCACTCTCTGTTAAGCACTGATCTGCTCC--------------------------------------ATA-GTGAACCCCTCGTGGATTTTATACATTGGAAAATGGTCTCTTGGTACGTTACTTCTCTTAATGTTCTTAACTTTGTCCTTCACTTAAAAGAAATCCTTAATTTTGAGGTATcgattattttaacttttgttctttggcatatgattttaaaagtctttttatcCCAAACTTAC--AGATATTCTTATACGTCTTCTTATATCATCTTTAACGtttttacctttcacatttagGGCTTTCATGGACCTGTCATTCACCAAGTGTTATGAGGTGggaatccaatttttt-- i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96713843 408 + 98384682 GCACTTTGGCCTTTGGGAGGAACAAGAGGGAAGACAGGAACCTCTTTTTTCTGGAGCTCCTTCCCTGACT--AGGACTGGTTGGCCGGTCAGTTTCACTCTCTGTTAAGCACTGATCTGCTCT--------------------------------------GTA-GTGAACCCATCGTGGATTTTATACATTGGAAAATGGTCTCTTGATACATTATTTctcttgatgttcttaactttgtccttcacttaaaagaaatccttaattttgaggtatcgattattttaacttttgttctttggcatatgattttaaaagtctttttatcccaaacttac--agatattcttatacgtcttcttataccatctctaacgttttcacctttcacatttagggctttcatggacctggcattcaccaagtgttatgaggtgggaatccaa-ttttt-- i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169921893 383 + 171630274 GCACTT------TTGGGAAGAACAAGCAGGAAGACGGGAGCGTCCTCTTTCTTGAGCTCCTACCGTGCTCTGGGGACCCGTCGGCGG----GTTCCGCCCTGTGTTAGACACTGATCTGCTCC--------------------------------------CAC-GTGAACCCCTGGCTGA--GtattcattgcagaatggtctcctgctgcattacttctcttcattttcttaattttgttcttcatttaaaagaaatccttacttttgatgtatcgattattttaacttttgttcttgggcatattattttaaaagtcattttatcccaaatctacaaagatagtcttagacgtcttcttataccctctttcacatttttacctttcatatttaggG---------------CACTCACCAGGTGTCATGAGGTGAGAATCCA---CTAT-- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56201036 3277 + 122678785 I a score=814025.000000 s hg38.chr6_KB021644v2_alt 136353 278 + 185823 TTTTTTACGTTCTAGGATTCAGCCAccttcaatctccctaaccgtttctaatagttttgacatttg-ttccttaccaatcaacctccttctcagcgatctga-------cgtctccaggactgaacttggaggaacttccctgtaacctgtgttagtttgctgtcttgttggaggctagacgcTAATAA-TACCTGGGCTCATGTTTTTTGAGGGTGTCA---TTCTTTCTTTTTCTCTTGATGTTTT------AAGCCTTTTGTAGAACTCAGGATTCCCAGCAC------------------------------------------------------------------TAAACCTCAC s panTro4.chr6 170724852 278 + 172623881 TTTTTTACGTTCTAGGATTCAGCCAccttcaatctccctaaccgtttctaatagttttgacatttg-ttccttaccgatcaacctccttctcagcgatctga-------cgtctccaggactgaacttggaggaacttccctgtaacctgtgttagtttgctatcttgttggaggctagatgcTAATAA-TACCTGGGCTCATGTTTTTTGAGGGTGTCA---TTCTTTCTTTTTCTCTTGATGTTTT------AAGCCTTTTGTAGAACTCAGGATTCCCAGCAC------------------------------------------------------------------TAAACCTCAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172479269 278 + 174210431 TTTTTTACGTTCTAGGATTCAGCCACCTTCAGTCTTCCTAACCGTTTCTAATAGTTTTGACATTTG-TTCCTTACCAATCAACCTCCTTCTCAGCGATCTGA-------CGTCTCCAGGACTGAACTTGGAGGAACTTCCGTGTAACCTGTGTTAGTCCGCTATCTTGTTGGAGGCTAGACTTTAATAA-TACCTAGGCTCATATTTTTTGAGGGTGTCA---TTCTTTCTTTTCCTCTTGATGTTTT------AAGCCTTTTGTAGAACTCAGGATTCCCAGCAC------------------------------------------------------------------TAAACCTCAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156338664 266 + 157873769 ttttttATGTTCTAGGATTCAGCCAccttcagtctccctaaccgtttctaatagttttgacatttg-ttccttaccaatcaacctccttctcagcgatctga-------catctccgggactgaacttggaggaacttccctgtaacctgtgttagtttgctatcttgTTGGAGGCTAGACGTTAATAA-TTCCTGGGCTCATATTTTTTGAGGGTGTCG---TTCTTTCTTTTTCTCTTCATGTTTT------AAGCCATCTGTA-AACCCAGGATTCCGAGCA----------------------------------------------------------------------------- i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168155405 278 + 169853907 ttttttacatTCTAGgtttcagccaccttcaatttccctaactgtttctaatagttttgacatttg-ttccttaccaatcaacctccttctcagcgatctga-------cgtctccaggactgaacttggaggaatttccctgtaacctgtgttagtttgctatcctgttggaggctggaCGTTAATAA-TACCTGGGCTCATATTTTTTGACGGTGTCA---TTCTTTCTTTTTCTCTTGATGTTTT------AAGCCTTTTGTAGAACTCAGGATTCCCAGCAC------------------------------------------------------------------CAAACCTCAC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169110063 278 - 170955103 ttttttacatTCTAGgtttcagccaccttcaatttccctaaccgtttctaatagttttgacatttg-ttccttaccaatcaacctccttctcagcgatctga-------cgtctccaggactgaacttggaggaatttccctgtaacctgtgtaaatttgctatcctgttggaggctggaCGTTAATAA-TACCTGGACTCATATTTTTTGACGGTGTCA---TTCTTTCTTTTTCTCTTGATGTTTT------AAGCCTTTTGTAGAACTCAGGATTCCCAGCAC------------------------------------------------------------------CAAACCTCAC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163928150 278 + 165299245 ttttttacattctagCATTCAGCCACCTTCAATCTCCCTAACCGTTTCTAATAGTTTTGACATTTG-TTCCTTACCAATCAACCTCCTTCTCAGCGATCTGA-------TGCCTCCAGGACTGAACTTGGAGGAACTTCCCTGTAACCTGTGCTAGTTTGCTATCCTGTTGGAGGCTAGACGTTAATAA-CACCTGGGCTCCTATTTTTTGACAGggtca---ttctttctttttctcttgatgttTT------AAGCCTTTTGTAGAACTCAGGATTCCCAGCAC------------------------------------------------------------------CAAACCTCAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96714251 278 + 98384682 ttttttaccTTCTAGGATTCAGCCAccttcaatctccctgaccgtttctaatagttttgacctttg-ttccttaacaatcaacctccttctcagcgatctga-------cgtctccaggactgaacttggaggaacttccctgtaacctgtggtagtttgctatcctgTTGGAGGCTAGACGTTAATAA-TACCTGGGCTCATATTTTTTGACGGTGTCA---TTCTTTCTTTTACTCTTGATATTTT------AAGCCTTTTGTAGAACTGAGGATTCCCAGCAC------------------------------------------------------------------CAAACCTCAC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169922276 271 + 171630274 TTTTTTATGTTCTAGGATTCGGCCACCTGCAATCTCCCTAACC----------GTTTGGACATTTG-CTCCTTCCCTATCAACCTC---CCCAGCAATCTGAGAAGTTCAGTCTTCAGGACTGAACCTGGAGGAAGGGCC-TGTAACCTGTG-TAACTTGCTGTCTTGCTGGAGGCCAGAAGCTAATAAGCGTCTGAGCTGATATTTTTTGATGATGTCA---TTCTTTTCTTTTCTCTTGATGCTTT------AAGCCTTTGTTAGAACCATGGCTTCCTAGCAC------------------------------------------------------------------CAAACGTCGC i calJac3.chr4 C 0 C 0 s canFam3.chr1 56204313 340 + 122678785 TTCCTTATGTCCTGGGATCTAGCC-TCTCCAGTGGCCCCAG--GCTTCTCGTAGCTCTCACACCTGCCTCTTTCCTGCTCTATGTCCATCTCTGCAGTATCT-------CG------GGGCTATGTTTAGGGGGA---CCCAGCAACTAGTGTGAGTTTGCTATTGTGTTGGGAGCTGGGAGGTAATAA-TATCTGGGTGCATATTTTTTGATA--GTCAATTTTCCTTCTTTTTCTCTTGATATTCTTCCTAAGGGTCTACTGTAGAATTTAGGATTCCTggaacacctgagtggctcaggtggttaagcatctatctttggttcaggtcatgatctcagggtcctgggatcgagcctcac i canFam3.chr1 I 3277 I 145 a score=278074.000000 s hg38.chr6_KB021644v2_alt 136631 90 + 185823 CTG----TGATGATTGAAAGTGATAAGATCCTTCAGTACCTCTATCCAGTGGTATTCACTGCATTCCCACCCTGTGGTGAGCCTCATGCTTGGT s panTro4.chr6 170725130 90 + 172623881 CTG----TGATGATTGAAAGTGATAACATCCTTCAGTGCCTCTATCCAGTGGTATTCACTGCGTTCCCACCCTGTGGTGAGCCTCATGCTTGGT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172479547 90 + 174210431 CTG----TGATGATTGAAAGTGATAAGATCCTTCAGTGCCTCTATCCAGTGGTATTAACTGCGTTCCTACCCTGTGGTGAGCCTCATGCTTGGT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156338930 90 + 157873769 CTG----TGATGATTGAAAGTGATAAGATCCTTCAGTGCCTCTATCCAGTGGTATTAGCTGCGTTCCCACCCTGTGGTGAGCCTCATGCTTGGT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168155683 90 + 169853907 CTA----TGATGATTGAAGGTGATAAGATCCTTCAATGCCTTTATCCAGTGGTATTAACTGCATTCCCACCCTGTGGTGAATCTCACGCTTGGT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169110341 90 - 170955103 CTA----TGATGATTGAAGGTGATAAGATCCTTCAATGCCTTTATCCAGTGGTATTAACTGCATTCCCACCCTGTGGTGAATCTCACGCTTGGT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163928428 90 + 165299245 CTA----TGATGATTGAAGGTGATAAGATCCTTCAATGCCTTTATCCAGTGGTATTAACTGCATTCCCACCCTGTGGTGAATCTCACGCTTGGT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96714529 90 + 98384682 CTA----TGATGACTGAAGGTGATAAGATCCTTCAATGCCTTTATCCAGTGGTATTAACTGCGTTCCCACCCTGTGGTGAATCTCACGCTTGGT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169922547 89 + 171630274 CTG----TGATGA-TGAGGGTGACAAGATCCTTCACTGCCTTCACTCAACAGTATTAACTAGGTCCCCACCCAGAGGTGAGCCTCTTGCTTGGT i calJac3.chr4 C 0 C 0 s canFam3.chr1 56204798 92 + 122678785 CTGTGCCTGATGTTTGAAGGTGGCAACAATATGGAGTTCTTTACTCCAAAAGTAGTCATTGGATTCCCACTCTGAG--GAGCCATACACTTGGT i canFam3.chr1 I 145 I 2167 a score=244595.000000 s hg38.chr6_KB021644v2_alt 136721 98 + 185823 GATGCAGGGTGAGGAGGCGGGGAGGGGACTACCCACGGAGAGCCTGGAGGCTCAGGTGTGCTCAGGGGG----GCCTGGTGCACTTGGCCTTTTGGGAA-TGC s panTro4.chr6 170725220 99 + 172623881 GATGCAGGGTGAGGAGGCGGGGAGGGGACTACCCACGGAGAGCCTGGAGGCTCAGGTGTGCTCAGGGGG----GCCTGGTGCACTTGGCCTTTTGGGAAGTGC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172479637 84 + 174210431 GGCGCAGGGTGAGGAGGCGGGGAGGGGACTACCCACGG---------------AGGTGTACTCAGGGGG----GCCTGGTGCACTTGGCCTTTTGGGAAGTGC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156339020 99 + 157873769 GACGCAGGGTGAGGAGGCAGGGAGGGGACCACCCACGGAGAGCCTGGAGGCTCAGGTGGGCTCAGGGGG----GCCTGGTGCACTTGGCCTTTTGGGAAGTGC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168155773 99 + 169853907 GATGCAGGGAGAGGCGGCGGGGAGGGGAGGACCCACGGAGAGCCTGGAGGCTTGGGTGGGCTTAGGGGG----GCCTGGTGCACTTGGCCTTTTGGGAAGTGC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169110431 99 - 170955103 GATGCAGGGAGAGGAGGCGGGGAGGGGAGGACCCACGGAGAGCCTGGAGGCTTGGGTGGGCTTAGGGGG----GCCTGGTGCACTTGGCCTTTTGGGAAGTGC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163928518 97 + 165299245 GATGCagggagaggaggcggggaggggaggacccatggagag--tggaggcttgggtgggcttaggggg----aCCTGGTGCACTTGGCCTTTTGGGAAGTGC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96714619 103 + 98384682 GATGCAGGGAGAGGAGGCGGGGAGGGGAGGACCCACGGAGAGCCTGGAGGCTTGGATGGGCTTGGGGGGGCGCGCCTGGTGCACTTCGCCTTTTGGGAAGTGC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169922636 86 + 171630274 GACTCAGTGTGAGGACGCGGGGAAGGGAGGGC------------TAGAGGCTCGGGTGGGCTCAGGAGG----GCCTGGTGCACTTGG-CTTTTGTACAGTGT i calJac3.chr4 C 0 I 1123 e canFam3.chr1 56204890 2167 + 122678785 I a score=2726384.000000 s hg38.chr6_KB021644v2_alt 136819 980 + 185823 AGAAGTCCAGGGAATTGGTTTATTCAGGGACCTGGCTCTGTGCCTACATGCTCTAAGTGAGGAGCCATAGGCCCTACCAGTCCCCATCTCCGAGGGCAGGAAGCCAGACGTGAGCATTGAGGAAATGGAGGCACTGGGGAGGTATCATCCAGGGTTCTTGCTCACCAGGCCTTTGCATAGCAGTGGGGAGAGAACGGGCCCAGGGAGGACTCACCAAAGACCCATGGGAGCTGCATGGAGCATCCCAGGGCCCCAGTGCTCCCTCCTTCCACAATGTGGATGGCAGGAGGGGTATTCTGAGGACCCTCTACGTGGGCCAGCCTTTCATTTTCCTTTGCATCTTTCAATGGAGTTAAAAGTAGAACCTTCCTACCCCCATTGAGGACAGGGGCACCTAA---------------CTTCCACACGCCACGGAAACCCCCAGGGCACTTGAGGGCTGATGTCCGGTAGGGGCCAGCACCTGCTCCTGGAATGAATTAATCAGCAAAATCATTGCAGCCCCCACATTATTTTCAACAAATATTAAGGTGTTCTCTAATCTTTC-TCCCATTTTGGttattcatagtgtatcaccactatctgaaatcaccttgactatttgtctaggtgaattatctgtctc-cccacgaggatg---------tacactttatacttacaaggtcctgttcatctcactagtccctggttcttcctgtctaaaacaatactacgcctgtagtaggagctcagctgctattcaggtcaatgaaAGGTATGAAGGGGTGACTGAATAATGATTTAATGCAACAAGGTAGGACTTCAGGTGCCCTTGGCGGTCCTGTCATTAGCGGAGTCATTGTGGAAAGAAATGCACCAGTGCTAAGTAGAATTAAGCACGTAAATAAA-GCAGTCGATTTGTTAGGTTAATCCCTTGGCAATAGCTCTCAGTTTATTTTATGGGCACATTCTTATTTTATTTCATTATCATTTATTAGATTCAAAATATT s panTro4.chr6 170725319 980 + 172623881 AGAAGTCCAGGGAATTGGTTTATTCGGGGACCTGGCTCTGTGCCTACATGCTCTAAGTGAGGAGCCATAGGCCCTACCAGTCCCCATCTCCGAGGGCAGGCAGCCAGACGTGAGCATTGAGGAAATGGAGGCACTGGGGAGGTATCATCCAGGGTTCTTGCTCACCAGGCCTTTGCATAGCAGTGGGGAGAGAACGGGCCCAGGGAGGACTCACCAAAGACCCATGGGAGCTGCATGGAGCATCCCAGGGCCCCAGTGCTCCCTCCTTCCACGATGTGGATGGCAGGAGGGGTATTCTGAGGACCCTCTACGTAGGCCAGCCTTTCATTTTCCTTTGCATCTTTCAATGCAGTTAAAAGTAGAACCTTCCTACCCCCATTGAGGACAGGGGCACCTAA---------------CTTCCACACGCCATGGAAACCCCCAGGGCACTTGAGGGCTGATGTCCAGTAGGGGCCAACACCTGCTCCTGGAATGAATTAATCAGCAAAATCATTGCAGCCCCCACATTATTTTCAACAAATGTTAAGGTGTTCTCTAATCTTTC-ACCCATTTTGGttattcatagtgtatcaccactatctgaaatcaccttgactagttgtctaggtgaattatctgtctc-cccacgaggatg---------tacactttatacttacaaggtcctgttcatctcactagtccctggttcttcctgtctaaaacaatactaggcctgtagtaggagctcagctgctattcaggtcaatgaaAGGTATGAAGGGGTGACTGAATAATGATTTAATGCAAGAAGGTAGGACTTCAGGTGCCCTTGGCGGTCCTGTCATTAGCGGAGTCATTGTGGAAAGAAATGTACCAGTGCTAAGTAGAATTAAGCAGGTAAATAAA-GCAGTCGATTTGTTAGGTTAATCCCTTGGCAATAGCTCTCAGTTTATTTTATGGGCACGTTCTTATTTTATTTCATTATCATTTATTAGATTCAAAATATT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172479721 980 + 174210431 AGAAGTCTAGGGAATTGGTTTATTCAGGGACATGGCTCTGTGCCCACATGCTCTAAGTGAGGAGCCATAGGCCCTAGCAGTCCCCATCTCCAAGGGCAGGTGGCCAGACGTGAGCGTTGAGGAAATGGAGGCACTGGGGAGGTGTCATCCAGGGTTCTTGCTCACCAGGCCTTTGCATAGCAGTGGGGAGAGAACGGGCCCAGGGAGGACTCACCAAAGACGCACAGGAGCTGCATGGAGCATCCCAGGGCCCCAGCGCTCCCTCCTTCCACTATGTGGATGGCAGGAGGGGTATTCTGGGGACACACTACGTGAGCCAGCCTTTCATTTTCCTTTGCATCTTTCAATGGAGTTAAAAGTGGAACCTTCCTACCCCCATTGAGGACAGGGGCACCTAA---------------CTTCCACACGCCACGGAAACCCCCAGGGCACTTGAGGGCTGATGTCCAGTAGGGGCCAGCACCTGCTCCTGGAATGAATTAATCAGCAAAATCATTGCAGCCCCCACATTATTTTCAAGAAATACTAACGTGTTCTCTAATCTTTC-ACCtattttggttattcatagtgcatcaccactatctaaaatcaccttgactatttgtctaggtgaattatctgtctc-cccacaaggacg---------tacactttatacttacaatttcctgttcatctcattagtccctggttcttcctgtctaaaacaatactaggcctgtggtaggagctcaGCTCCTATTCAGGTCAATGAAAGGTATGAAGGGGTGACTGAATAATGATTTAATGCAAGAAGGTAGGACTTCAGGTGCCCTTGGCAGTCCTGTCATTAGCGGAGTCATTGTGGAAAGAAATGTACCAGTGCTAAGTAGAATTAAGCAGGTAAATAAA-GCAGTTGATTTGTTAGGTTAATCCCTTGGCAATAGCTCTCAGTTTATTTTATGGGCACATTCTTATTTTATTTCATTATCATTTATTAGATTCAAAATATT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156339119 988 + 157873769 AGAAGTCCAGGGAATCGG-TTATTCAGGGACCTGGCTCTGTGCCCACGTGCTCTAAGTGAGGAGCCATAGGCCCTACCAGTCCCCATCTCCCAGGGCAGGCAGCCAGGTGTGAGCGTTGAGGAAATGGAGGCACTGGGGAGGTATCATCCAGGGTTCTTGCTCACCAGGCCTTTGCATAGCAGTGGGGAGAGAATGGGCCCAGGGAAGACTCACCAAAGACCCACGGGAGCTGCACAGAGCGTCCCAGGGCCCCAGGGCTCCCTCCTTCCACGATGTGGATGGCAGGAGGGGTATTCTGAGGACCCTCTACATGGGCCAGCCTTTCATTTTCCTTTGCATCTTTCAGTGGAGTTAAAAGTGAAACCTTCCTACCCCCATTGAGGACAGGGGCTCCTAA---------------CCTCCACACGCCACAGAAACCCCCAGGGCACTTGAGGGCTGATGTCCAGGAGGGGCCAGCACCTACTCCTGGAATGAATTAGTCAGCAAAATCATTGCAGCCCCCACATTGTTTTCAACAAATATTAACGTGTTCTCTAATCTTTC-GCCTATCTTGGTTATTCATAGTGCATCACCACTATCTGAAATCACCTCGACTAGTTGTCTAGGTGAATTATCTGTCTC-CCCAAGAGGACGTACACTTTATACACTTTATACTTACAAGGTCCTGTTCATCTCGTTAGTCCCTGGTTCTTCCTGTCTAAAACAATACTAGGCCTGTGGTAGGAGCTCAGCTGCTATTCGGGTCAACGAAAGGTATGAAGGGGTGACTGAATAATGATTTAATGTAAGAAGGTAGGACTCCAGGTGCACTTGGTGGTCCTGTCATTAGTGGCGTCATTGTGGAAAGAAATGTACCAGTGCTAAGTAGAATTAAGCAAGTAAATAAA-GCAGTTGATTTGTTAGGTTAATCCCTTGGCAATAGCTCTCAGTTTATTTTATGGGCGCATTCTTATGTTATTTCATTATCATTTATTGGATTCAAAATATT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168155872 981 + 169853907 GGAAGCCCAGGGAATTGGTTTATTCAGGGACCTGGCCCTGTGCCCAAGTGCCCTAAGTGAGGAGTCCTAGGCTCTACGAGTCTCCATCTCTGAGGGCAGGTGGCCAGACATGAGTGTTAAGGAACTGGAGGCACTAGGGAGGTATCATCCAGGGTTCTTGCTCACTGGGCCTTTGCGTAGCAGTGGGGAGAGAACGGGCCCAGGCAGGACTCACCAAAGACCCATGGGAGCTGCACGAAGCGTCCCAGGGCCCCAGCTCTCCCTCCTTCCACAATGTGGATGGCAGGAGGGGGATTCTGAGGACCCTCTACATGGACCAGCCTTTCATTTTTCTTTGCATCTTTCAATGGAGTTAAAAGGGGAACCTTCCTACCTCCATTGAGGACAGGGGCTCCTGC---------------CTTCCACACACCACGGAAACCCTCAGGGCACTTGAGGACTGACGTCCAGTAGGGGCCAGCACCTGCTCCTGGAATGAATTAATCAGCAAAATCATTGCAGCCCCCACattattttaaataaatattaaGGTGTtctctaatcttttcgcctattttagttattcacagtgcatcaccactatctgaaatctccttgactagttgtctaggtgaatgatctgtctctcccacgaggaca---------tacactttatacttacaaggtcctgtccatctcgttagtccctgcttcttcctgtctaaaacaatactgagcctgtgctaggagctcagctgctattcgggtcaatgaaAGGTATGAAGGGGTGACCGAATAATCATTTAACATAAGAAGGTAGGACTCCAGGTGCCCTTGGCGATCCTGTCATTAGTGCAGTCCTTGTGGAAAGAAATGTAGCAGTGCTAAGTAGAATTAAGCAGGTAAAAAAA--CAGTTGATTTGTTAGGTTAATCCCTTGGCAATGACTCTCAGTTTATTTTATGGGCACATTCTTATTTTATTTCTTTATCATTTATGAGATTCAAAATATT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169110530 982 - 170955103 GGAAGCCCAGGGAATTGGTTTATTCAGGGACCTGGCCCTGTGCCCAAGTGCCCTAAGTGAGGAGTCCTAGGCTCTACGAGTCCCCATCTCTGAGGGCAGGTGGCCAGACATGAGTGTTGAGGAACTGGAGGCACTAGGGAGGTATCATCCAGGGTTCTTGCTCACTGGGCCTTTGCGTAGCAGTGGGGAGAGAACGGGCCCAGGCAGGACTCACCAAAGACCCATGGGAGCTGCACGAAGCGTCCCAGGGCCCCAGCGCTCCCTCCTTCCACAATGTGGATGGCAGGAGGGGGATTCTGAGGACCCTCTACATGGACCAGCCTTTCATTTTTCTTTGCATCTTTCAATGGAGTTAAAAGGGGAACCTTCCTACCTCCATTGAGGACAGGGGCTCCTGC---------------CTTCCACACACCACGGAAACCCTCAGGGCACTTGAGGACTGACGTCCAGTAGGGGCCAGCACCTGCTCCTGGAATGAATTAATCAGCAAAATCATTGCAGCCCCCACATTATTTTAAATAAATATTAAGGTGTTCTCTAATCTTTT-Gcctattttagttattcaccgtgcatcaccactatctgaaatcaccttgactagttgtctaggtgaatgatctgtctctcccacgaggaca---------tacactttatacttacaaggtcctgtccatctcgttagtccctgcttcttcctgtctaaaacaatactgagcctgtgctaggagctcagctgctatttgggtcaatgaaAGGTATGAAGGGGTGACTGAATAATCATTTAACCTAAGAAGGTAGGACTCCAGGTGCCCTTGGCGATCCTGTCATTAGTGCAGTCCTTGTGGAAAGAAATGTAGCAGTGCTAAGTAGAATTAAGCAGGTAAAAAAAAGCAGTTGATTTGTTAGGTTAATCCCTTGGCAATGACTCTCAGTTTATTTTATGGGCACATTCTTATTTTATTTCTTTATCATTTATGAGATTCAAAATATT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163928615 982 + 165299245 GGAAGCCCAGGgaattggtttattcagggaccTGGCCCTGTGCCCAAGTGCCCTAAGTGAGGAGCCCTAGGCTCTACCAGTCCCCATCTCTGAGGGAAGGTGGCCAGACATGAGTGTTGAGGAACTGGAGGCACTAGGGAGGTATCATCCAGGGTTCTTGCTCACTGGGCCTTTGCGTAGCAGTGGGGAGAGAACGGGCCCAGGTAGGACTCACCAAAGACCCACGGGAGCTGCACGGAGCGTCCCAGGGCCCCAGCGCTCCCTCCTTCCACAATGTGGATGGCAGGAGGGGGATTCTGAGGACCCTCTACATGGACCagcctttcatttttctttgcatctttcaatGGAGTTAAAAGGGAAACCTTCCTACCTCCATTGAGGACAGGGGCTCCTGC---------------CTTCCACACACCACGGAAACCCTCAGGGCACTTGAGGGCTGACGTCCAGTAGGGGCCAGCACCTGCTCCTGGAATGAATTAATCAGCAAAATCATTGCAGCCcccacattattttaaataaatattaaggtGTTCTCTAATCTTTC-GCCTATTTTAGTTATTCACAGTGCATCACCACTATCTGAAATCACCTTGACTAGTTGTCTAGGTGAATGATCTATCTCTCCCACGAGGACA---------CACACTTTATACTTACAAGGTCCTGTCCATCTCGTTAGTCCCTGCTTCTTCCTGTCTAAAACAATACTGAGCCTGTGCTAGGAGCTCAGCTGCTATTCGGGTCAATGAAAGGTATGAAGGGGTGACTGAATAATCATTTAACGTAAGAAGGTAGGACTCCAGGTGCCCTTGGCGATCCTGTCATTAGCGGAGTCCTTGTGGAAAGAAATGTAGCAGTGCTAAGTAGAATTAAGCAGGTaaaaaaaaGCAGTTGATTTGTTAGGTTAATCCCTTGGCAATGACTCTCAGTTTATTTTATGGgcacattcttattttatttctttatcatttatGAGATTCAAAATATT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96714722 982 + 98384682 GGAAGCCCAGGGAATTGGTTTATTCAGGGACCTGGCCCTGTGCCCAAGTGCCCTAAGTGAGGAGCCCTAGGCTCTACCAGTCCCCATCTCGGAGGGCAGGTGGCCAGACATGAGTGTTGAGGAACTGGAGGCACTAGGGAGGTATCATCCAGGGTTCTTGCTCACTGGGCCTTTGCGTAGCAGTGGGGAGAGAACGGGCCCAGGGAGGACTCACCAAAGACCCATGGGAGCTGCACGGAGCGTCCCAGGGCCCCAGCGCTCCCTCCTTCCACAATGTGGATGGCAGGAGGGGGATTCTGAGGACCCTCTACATGGACCAGCCTTTCATTTTTCTTTGCATCTTTCAATGGAGTTAAAAGGGGAACCTTCCTACCCCCATTGAGGACAGGGGCTCCTGC---------------CTTCCACACACCACGGAAACCCTCAGGGCACTTGAGGACTGACGTCCAGTAGGGGCCAGCACCTGCTCCTGGAATGAATTAATCAGCAAAATCATTGCAGCCCCCACATTATTTTAAATAAATATTAAGGTGTTCTCTAAccttcc-gcctattttagttattcacagtgcatcaccactatctgaaatcaccttggctagttgtctaggtgaacgatctgtctctcccatgaggacg---------tacactttatacttacaaggtcctgtccatctcgttagtccctgcttcttcctgtctgaaacaatactgagcctgtggtaggagctcagctgctattcgggtcaatgaaagaTATGAAGGGGTGACTGAATAATGATTTAACGTAAGAAGGTAGGACTCCAGGTGCCCTTGGTGATCCTGTCATTAGCGGAGTCCTTGTGGAAAGAAATGTAGCAGTGCTAAGTAGAATTAAGCAGGTAAAAAAGAGCAGTTGATTTGTTAGGTTAATCCCTTGGCAATGACTCTCAGTTTATTTTATGGGCACATTCTTATTTTATTTCTTTATCATTTGTTAGATTCAAAATATT i chlSab2.chr13 C 0 I 4 s calJac3.chr4 169923845 945 + 171630274 AGAACCCCA-GGAACTGGTTTATTTGGGGATCAGGCTCTGTGTCCACACGCTCTAAGTGAGGAGCCATGGGCCCAACTAGTCCACATCTCTGAGTGCAGATGGCCAGATGTGAGCG-TGAGGAGCTGGAGACA-TGGGGTGCTATCATCCAGGATTCTCATTCACTGGGCCTTTGGGTAGCAGTGGGGAGAGGAC-GGCTCAGGGAGGACTCACCACAGCCCCACAGGAGCTGCTCAGAGTGCCCACAGACCCCAGCACTCCCTCCTTCCAGGATGCGGATGGCATGAGGGGGATGCTGAGGACCCTCTGCATGAACCAGTCTTTCGTTTTCCTTTGCATCTTTCAATGGAGTT-AGCGTGGAACATTCCTACCCCTGTGGAGGTCAGGGGCTCCTACTGGTGTGGACGGGGTTTTCTACATGCCACAGATACCC-CAGGCCACGTGAGGGCTGATGTCCAGTA-GCACCAGCACCTGCTTCTGGAGTGAATTCATCA-----------GCAGCCTCCGCATTATTTTCAACATGTATTAACGTGTTCTCCAATCTTGG-GCCTGTTTTAGTTTCTAGTAGTGCATCGCTGCCATCTGACACCACCTTGACTAGTTGTCTGGGTTAATTATGTCTCTC----ACCAGGAGG---------TCCGCTCTGTACTTACAAGCTCCTGTTCGTCTCCCTAGT-CCGGGTTCTT----------------CTGGGGCTGTGCTAGGACCTCAGCTGCTATTCAAGTCCGTCAAAGGGATAAGGGGGTGACTGAACAAGGATCTCATG-AGGCAGGAGGGACTCCAGGTCCTCTTGGGGGTCCCGTCATGAACGCAGTCGTTGTGGAAGGACATGTGGCAGGGCTAAGTGGAATGAAGCAGGTAAACGAG-GCAGGCG-TTTGTTAGGTGAATCCCTCGG----------CAGTTTATTTTATAGATGCATTCTCATTTTATTTTATTATCATTTGCGAGAGTCAAAATATG i calJac3.chr4 I 1123 C 0 e canFam3.chr1 56204890 2167 + 122678785 I a score=719584.000000 s hg38.chr6_KB021644v2_alt 137799 337 + 185823 ATGAGAGCCTTGAGGACCCATTTAAAATAATCTCCACATCCACAGCCATCGCAGATTATGACAACAAATGTGCTTAATTGAATCATGAACTGTCACACTGACTCCGCTGCCCCACGCTGCGACACTGTTGCACCCCCATGCTGGGAGCTCAGTGACAATGCCAACATCGTGCATCTGTAGTGCAGGGAGTGGAGCCTGCCATGTCTTCACTGTCACGCAGATGGCAATGTCACAGGCACGGCCATTGCTGGGAAATGCTACACAGCTAAGAGACAAATCCCAGCAGTGACGTGGCACATCTCAGAAGTGTAGCTTTGAGTGAGAA----AATAAAAAGTAG s panTro4.chr6 170726299 337 + 172623881 ATGAGAGCCTTGAGGACCCATTTAAAATAATCTCCACATCCACAGCCATCGCAGATTATGACAATAAATGTGCTTAATTGAATCATGAACTGTCACACTGACTCCACTGCCCCACGCTGTGACACTGTTGCACCCCCATGCTGGGAGCTCAGTGACAATGCCAACATCGTGCACCTGTAGTGCAGGGAGTGGAGCCTGCCATGTCTTCACTGTCACGCAGATGGCAATGTCACAAGCACGGCCATTGCTGTGAAATGCTACACAGCTAAGAGACGAATCCCAGCAGTGACATGGCACATCTCAGAAGTGTAGCTTTGAGTGAGAA----AATAAAAAATAG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172480701 321 + 174210431 ATGATAGCCTTGAGGACCCATTTAAAATCATCTCCACATCCACAGCCATCGCAGATTATGACAATAAATGTGCTTAATTGAATCATGAACTGTCACACTGACTCTGCTGCCCCATGCTGCGACACTGTTTCACCCCCATGCTGGGAGCTCAGTGACAATGCCAACATCATGCACCTGTAGTGCAGGGAGTGGAGCCTGCCATGTCTTCACTGTCATGCACATGGCAATGTCACAAGCACAGCCATTGCTATGAAATGCTACACAGCTGAGA----------------GACATGGCACATCTCAGAAGCATAGCTTTGAGTGAGAA----AATAAAAAGTAG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156340107 337 + 157873769 ATGAGAGGCTTGAGGACCCATTTAAAATCATCTCCACATCCACAGCCATCGCAGACGATGACAATACATGTGCTTCATTGAATCATGAACTGTCACACTGACTCCGCTGCCCCACGCTGCGACACTGTTGCACCCCCATGCTGGGAGCTCAGTGACAATACCAACGTCGTGCGCCTGTAGCGCAGGGAGTGGAGTCTGCCATGTCTTCGCTGTCACGCACATGGCAATGTCACAAGCATGGCCATTGCTGTGAAATGCTACACAGCTGAGAGACGAATCCCAGCAGTGACATGGCACATCTCAGAAGCGTAGCTTTGAGTGAGAA----AATAAAAAGTAG i nomLeu3.chr3 C 0 M 251 s rheMac3.chr4 168156853 337 + 169853907 ATGAGAGCCTTGAGGACCCATTTAAAATCACCTCCATATCCACAGCCATAGCAGAATATGACAATAGATGTGCTTCATTGAATCACGAACTGCCACACTAACTCCGCTGCCCCACACTGTGACACTGTTGCACCCCCACGCTGGGAGCTCAGTGACAATGCCAGTGTCGTGCACCTGTAGTGCAGGGAGTGGAGGCTGCCATGTCTTCACTGTCACGTACATGGCAATGCCACAGGCACGGCCATTGCTATGACATGCTACACAGCAGAGAGACGAATCCCAGCAGTGACGCGGCACATCTCAGAAGCGTAGCTTTGAGTGAGAA----AGTGAAAAGCAG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169111512 337 - 170955103 ATGAGAGCCTTGAGGACCCATTTAAAATCACCTCCATATCCACAGCCATAGCAGAATATGACAATAGATGTGCTTCATTGAATCACAAACTGCCACACTAACTCCGCTGCCCCACACTGCGACACCGTTGCACCCCCACGCTGGGAGCTCAGTGACAATGCCAGTGTCGTGCACCTGTAGTGCAGGGAGTGGAGGCTGCCATGTCTTCACTGTCACGTACATGGCAATGCCACAGGCACGGCCATTGCTATGACATGCTACACAGCAGAGAGACGAATCCCAGCAGTGACGCGGCACATCTCAGAAGCGTAGCTTTGAGTGAGAA----AGTAAAAAGCAG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163929597 337 + 165299245 ATGAGAGCCTTGAGGACCCATTTAAAATCACCTCCATATCCACAGCCGTAGCAGACTATGACAATAGATGTGCTTCATTGAATCACGAACTGCCACACTAACTCCGCTGCCCCACACTGTGACACCGTTGCACCCCCATGCTGGGACCTCAGTGACAATGCcagtgtcatgcacctgtagtgcaGGGAGTGGAGGCTGCCATGTCTTCACTGTCACGTACATGGCAATGCCACAGGCATGGCCATTGCTATGACATGCTACACAGCAGAGAGACGAATCCCAGCAGTGACGTGGCACATCTCAGAAGCGTAGCTTTGAGTGAGAA----AGTAAAAAGCAG i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169924790 337 + 171630274 ATGAGAGCCTTGAGGACCCGTTAAAAATCATCTCTGTCTCCAGAGCCATCGCAGAATATGCCCATAAGTGTGTTTAACTGAATCTCAAACTGTC-TGCTGCCTCCGTGGCCCCATGCTGTCACTCTGTTGCACCCCCATGCTGGGAGCTCAGCGACAGTGCTGACTTCATGCACCTGCAGTGCTGAG---TGAGACTGCCATGTGTTCGTTGTCACATACATGGCCGTGTCACAAGCACAGCCATTGCTGTGAAATGCTACACAGCAGAGAGACCAGTTACAGCAGGGATGGAGCACGTCTCAGAAGCACAGCTCTGAGTGAGAATGTCAGAAAGAAGTAG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56204890 2167 + 122678785 I e chlSab2.chr13 96715704 4 + 98384682 I a score=193275.000000 s hg38.chr6_KB021644v2_alt 138136 125 + 185823 GATATACCTCATAGCAAAAAGTTGTTTACATAAATCAAT------AAACACACTCACAATAAACAGCACTGCATACCCCACCTGTAAATATGCATCTCCGAGCACACATCTGAAATGCGCCGG--------GGGGGATA s panTro4.chr6 170726636 125 + 172623881 GATATACCTCATAGCAAAAAGTTGTTTATATAAATCAAT------AAACACACTCACAATAAAGAGCACTGCATACCCCACCTGTAAATATGCATCTCTGAGCACACATCTGAAACGCGCCGG--------GGGGGATA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172481022 128 + 174210431 GATATACCTCGTAGCAAAAAGTTATTTATGTAAATCAATAAATC-AAACACACTCACAATAAACAGTACTGCATACCCCACCAGTAAATATGCATCTCCGAGCACACATCTGAAATGTGCCGG--------GGGGA--T i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168157190 131 + 169853907 GATATACCCCATAGCACAAAGTTGTTTCTATAAATCAATAAATCAAAACACTCTCGCAATAAACAGCACTGGATCCCCCACCTGTAAATATGCATCTCCAAGCACACATCTGAAATGCGACGG--------GGGAAAGG i rheMac3.chr4 C 0 I 4 s macFas5.chr4 169111849 131 - 170955103 GATATACCCCATAGCACAAAGTTGTTTCTATAAATCAATAAATCAAAACACTCTCGCAATAAACAGCACTGGATCCCCCACCTGTAAATATGCATCTCCAAGCACACATCTGAAATGCGACGG--------GGGAAAGG i macFas5.chr4 C 0 I 4 s papAnu2.chr4 163929934 131 + 165299245 GATATACCCCATAGCACAAAGTTGTTtctataaatcaataaatcaaaacACTCTCGCAATAAGCAGCACTGGATCCCCCACCTGTAAATATGCATCTCCAAGCACACATCTGAAATGTGCCAG--------GGGAAAGG i papAnu2.chr4 C 0 I 4 s calJac3.chr4 169925127 139 + 171630274 GATATACCCCGTAGCACAAGATTGTTTATATAAATCAACAAATCAAAACACACTCACAATAAACAGCACTTCCTACCCCACCTGCAAATATGCATCTCCAAGCACCCATCTGAAATGCGCCTGGGTTGGGTGGGGAATG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56204890 2167 + 122678785 I e chlSab2.chr13 96715704 4 + 98384682 I e nomLeu3.chr3 156340444 251 + 157873769 M a score=81412.000000 s hg38.chr6_KB021644v2_alt 138261 39 + 185823 AGTGAATGGGACGAGAAGTGGGGTGGGGGCAGGCACAGA s panTro4.chr6 170726761 39 + 172623881 AGTGAATGGGACGAGAAGTGGGGTGGGGGCAGGCACAGA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172481150 39 + 174210431 GGTGAATGGGACGAGAAGTGGGGTGGGGGCAGCCACAGA i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168157325 39 + 169853907 AGTGAATGGGACAGGAAGTGGGGTGGGGGAAGCCACAGG i rheMac3.chr4 I 4 C 0 s macFas5.chr4 169111984 39 - 170955103 AGTGAATGGGACAGGAAGTGGGGTGGGGGAAGCCACAGG i macFas5.chr4 I 4 C 0 s papAnu2.chr4 163930069 39 + 165299245 AGTGAATGGGGCAGGAAGTGGGGTCGGGGAAGCCACAGG i papAnu2.chr4 I 4 C 0 s chlSab2.chr13 96715708 39 + 98384682 AGTGAATGGGACAGGAAGTGGGGTGGGGGAAGCCACAGG i chlSab2.chr13 I 4 C 0 s calJac3.chr4 169925266 37 + 171630274 AGTGAATGGGACAGAGAGTGGGA--GGAGCAACCACAGA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56204890 2167 + 122678785 I e nomLeu3.chr3 156340444 251 + 157873769 M a score=1791181.000000 s hg38.chr6_KB021644v2_alt 138300 652 + 185823 GAGGAGACTAAAGACAGAACAGGAGCTAACCAGGGGCCGTGGTAAGGGAGCAGGGCCAGCGTCACCTCCTGCACCCGGGGCCTACAATGCCCTCACTCACTGGGAGGAACTGCATGTTGCAGGGAAAGTTGAGTTCCTCTGTGAAATAACTCGCTTCCATTAGAAGGTATTAAAGGTCCTCAGACTG----------------------------------------------GAACCTTCCTCAGCAAGCGGCAGTATACACAGGTAAGCACTTTTGTATTTTCTAAATAAACTAACAAAATGAACTCTAAATGGAGCCATTCCTCTC-GGGGGAAAATGCCCCATTCTTAATAGCTTGACTTTTCGGCTGTTTCATTTTGATGGTTTATAATTCAGTTAAACACATGTCCTGTCATACTGGGTTATGGCCGGGGATGTGAAGGTAATTTTCACTGGGTCCTTGAGTTCCTCATGTTTTGAATCTAACA---GATGATCATGGAATATGGTTGTGACCATAAAATGAATAGAGAGCTACAGTCAAAGAATTAGCCTGACCATGCCTTTTCTTAGCGGTTAACTGTTGTGCAACAGAAAATGACTA-----TTATTCAGTTAACAAACAAGGCC-TAAGTGGGGTGTGAGCTCTGCACATCAGGAAGCTCTGTATGAATTCTAAATGAGGACAAATGTGAATCTTTGT s panTro4.chr6 170726800 652 + 172623881 GAGGAGACTAAAGACAGAACAGGAGCTAACCAGGGGCCGTGGTAGGGGAGCAGGGCCAGCGTCACCTCCTGCACCCGGGGCCTACAATGCCCTCACTCACTGGGAGGAACTGCATGTTGCAGGGAAAGTTGAGTTCCTCTATGAAATAACTCGCTTCCATTAGAAGGTATTAAAGGTCCTCAGACTG----------------------------------------------GAACCTTCCTCAGCAAGCGGCAGTATACACAGGTAAGCACTTTTGTATTTTCTAAATAAACTAACAAAATGAACTCTAAATGGAGCCATTCCTCTC-GGGGGAAAATGCCCCATTCTTAATAGATTGACTTTTCGGCTGTTTCATTTTGAGGGTTTATAATTCAGTTGAACACATGTCCTGTCATACTGGGTTATGGCCGGGGATGTGAAGGTAATTTTCACTGGGCCCTTGAGTTCCTCATGTTTTGAATCTAACA---GATGATCATGGAATACGGCTGTGACCATAAAATGAATAGAGAGCTACAGTCAAAGAATTAGCCTGATGACGCCTCTTCTTAGCGGTTAACTGTTGTGCAACAGAAGATGACTA-----TTATTCAGTTAACAAACAAGGCC-TAAGTGGGGTGTGAGCTCTGCACATCAGGAAGCTCTGTATGAATTCTAAATGAGGACAAATGTGAATCTTTGT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172481189 653 + 174210431 GAGGAGACTAAAGACAGAACAGGAGCTAACCAGGGGCCGTGGTAGGGGAGCAGGGCCTGCGTCACTTCCTGCACCCAGGGCCTGCAGCGCCCCCACTCACCGGGAGGAACTGCATGTTGCAGGGAAAGTTGAATTCCTCTATGAAATAACTTGCTTCCATTAGAAGGTATTAAAGGTCCTCAGACTG----------------------------------------------GAACCTTCCTCAGCAAGCAGCAGTATACACAGGTAAGCACTTTTGCATTTTCTAAGTAAACTAACAAAATGAACTCTAAATGGAGCCATTCCTCTCAGGGGGAAAATGCCCCATTCTTAATAGTTTGACTTTTCGGCTGTTTCATTTTGATGGTTTATAATTCAGTTGAACACATGTCCTGTCATACTGGGTTATGGCCGGGGATGTGAAGGTAATTTTCACTGGGTCCTTGAGTTCCTCATGTTTTGAATCTAACA---GATGATCATGGAATATGGCTGTGACCATAAGATGAATAGAGAGCTACAGTCAAAGAATTAGCCCGATGACTCCTCTTCTTAGCAGTTAACTATTGTGCAACAGAAGATGACTA-----TTATTCAGTTAACAAACAAGGCC-TAAGTGGGGTGTGAGCTCTGCACATCAGGAAGCTCTGTATGAATTCTAAATGAGGACAAATGTGAATCTTTGT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156340696 644 + 157873769 GAGGAGATT-AAGACAG-ACAGGAGT--ACC-GGGGCCGTGGTA-GGGAGCAGGGCCAGCGTCACCTCCTGCACCCGGGGCCTGCAGCGCCCCCACTCACCGGGAGGAACTGTGTGTTGCAGGGAAAGTTGAGTTCCTCTATGAAATAACTCACTTCCATTAGAAGGTATTAAAGGTCCTCAGATTG----------------------------------------------GAACCTTCCTCAGCAAGCAGCAGTATACACAAGTAAGCACTTTTGTATTTTCTAAATAAACTAACAAAACGAACTCTAAATGGAGCCATTCCTCTC--GGGGAAAATGCCCCGTTCTTAATAGCTTGACTTTTTAGCTGTTTCATTTTGATGGTTTATAATTCAGTTGAACACATGTCCTGTCATATTGGGTTATGGCC-GGGATGTGAAGGTAGTTTTCACTGGGTCCTTGAGTTCCTCATGTTTTGAATCTAATA---GATTATCATGGAATATGGCTGTGACCATAAGATGAATAGAGAGCTACAGTCAAAGAATCAGCCTGATGACTGCTCTTCTTAGCAGTTAACTATTGTGCAACAGAAGATGACTC-----TTATTCAGTTAACAAACAAGACC-TAAGCGGGGTGTGAGCTCTGCACATCAGGAAGCTCTGTATGAATTCTACGTGAGGACAAATGTAAATCTTTGT i nomLeu3.chr3 M 251 C 0 s rheMac3.chr4 168157364 698 + 169853907 GAGGAGATTAGAGACAGAACAGGAGCTAACCATGGGCTGTGGTAGGGGAGCAGGGCCAGGGTCTCCTCCTGTACCCGGGGCCTGCAGCACCCCCACTGACTGGGAGGAACGGCGTGTGGCAGGGAAAGTTCAGTTCCTCTATGAGATAACTCGCTTCCATTAGAAAGGATCTAAGGTCCCCAGATTGGAACCTTCCCCAGCAAGTTTCCTCTATGAGATAACTCGCTTCCATTGAACCTTCCCCAGCAAGCGGCAGTATACACAGGCAAGCACTTTTGTATTTTCTAAATAAACTAACAAAACAAGCTGTAAATGGAGATATTGTTCTCAGGGGGAAAATGCCCCATTCTTAATAGCTTGAC-TTTTGGCTGTTCCATTTTGATGGTTTATAATTCAGTTGAAAACATGTCCTGTCATATTGGGTTATGGCCAGGGATGGGAAGGTAATTTTCACTGGGTCCTTGAGTTCCTCATGTTTTGAATCTAACA---GATGATCTTGGAATACAGATGTGACCATAAGATGAATAGAGAGCTACAGTCAAAGAATTAGCCTGACGACTCCTCTTCTTAGCAATTAACTATTGTGCAACAGAAAATGACTA-----TTATTCAGTTAACAAACGAGGCC-TAAGTGGAGTATGAGCTCTGCACATCAGGAAGCTCTGTATGAATTCTAAATGAGGACAAATGTAAATCTTTAT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169112023 652 - 170955103 GAGGAGATTAGAGACAGAACAGGAGCTAACCATGGGCTGTGGTAGGGGAGCAGGGCCAGGGTCTCCTCCTGCACCCGGGGCCTGCAGCACCCCCACTGACTGGGAGGAACGGCGTGTGGCAGGGAAAGTTCAGTTCCTCTATGAGATAACTCGCTTCCATTAGAAAGGATCTAAGGTCTCCAGATTG----------------------------------------------GAACCTTCCCCAGCAAGCGGCAGTATACACAGGTAAGCACTTTTGTATTTTCTAAATAAACTAACAAGACAAGCTGTAAATGGAGATATTGTTCTCAGGGGGAAAATGCCCCATTCTTAATAGCTTGAC-TTTTGGCTGTTCCATTTTGATGGTTTATAATTCAGTTGAAAACATGTCCTGTCATATTGGGTTATGGCCAGGGATGGGAAGGTAATTTTCACTGGGTCCTCGAGTTCCTCATGTTTTGAATCTAACA---GATGATCATGGAATACAGATGTGACCATAAGATGAATAGAGAGCTACAGTCAAAGAATTAGCCTGACGACTCCTCTTCTTAGCAATTAACTATTGTGCAACAGAAAATGACTA-----TTAGTCAGTTAACAAACGAGGCC-TAAGTGGAGTATGAGCTCTGCACATCAGGAAGCTCTGTATGAATTCTAAATGAGGACAAATGTAAATCTTTAT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163930108 652 + 165299245 GAGGAGATTAGAGACAGAACAGGAGCTAACCATGGGCTGTGGTAGGGGAGCAGGGCCAGGGTCTCCTCCTGCACCCGGTGCCTGCAGCACCCCCACTGACTGGGAGGAACGGCGTGTGGCAGGGAAAGTTCAGTTCCTCTATGAGATAACTCGCTTCCGTTAGAAAGGATCTAAGGTCTCCAGATTG----------------------------------------------GAACCTTCCCCAGCAAGCGGCAGTATACACAGGTAAGCACTTTCgtattttctaaataaactaaCAAAACAAGCTGTAAATGGAGATATTGTTCTCAGGGGGAAAATGCCCCGTTCTTAATAGCTTGAC-TTTCGGCTGTTCCATTTTGATGGTTTATAATTCAGTTGAAAACATGTCCTGTCATATTGGGTTATGGCCAGCGATGGGAAGGTAATTTTCACTGGGTCCTCGAGTTCCTCATGTTTTGAATCTAACA---GATGATCATGGAATACAGATGTGACCATAAGATGAATAGAGAGCTACAGTCAAAGAATTAGCCTGACGACTCCTCTTCTTAGCAATTAACTATTGTGCAACAGAAAATGACTA-----TTATTCAGTTAACAAACGAGGCC-TAAGTGGAATATGAGCTCTGCACATCAGGAAGCTCTGTATGAATTCTAAATGAGGACAAATgtaaatctttat i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96715747 647 + 98384682 GAGGAGATCAGAGACGGAACAGGAGCTAACCAGGGGCCGTGGTAGGGGAGCAGGGCCAGGGTTGCCTCCTGCACCCGGGGCCTGCAGCACCCCCACTGACTGGGAGGAATGGCGTGTGGCAGGGAAAGTTCAGTTCCTCTATGAGATAACTCGTTTCCATTAGAAAGGATCTGAGGTCCCCAGATTG----------------------------------------------GAACCTTCCCCAGCAAGCGGCAGCATACACAGGTAAGCACTTTTGTATTTTCTAAATAAACTAGCAAAACAAGCTGTAAATGGAGATATTGTTCTCAGGGGGAAAATGCCCCATTCTTAATAGTTTGAC-TTCCGGCTGTTCCATTTTGATGGTTTATAATTCAGTTGAAAACACGTCCTGTCATATTGGGTTATGGCCAGGGATGTG-----AATTTTCACTGGGTCCTTGAGTTCCTCTTGTTTTGAATCTAACA---GAAGATCATGGAATACAGATGTGACCATAAGATGAATAGAGAGCTACAGTCAAAGAATTAGCCTGACGACTCCTCTTCTTAGCAATTAACTATTGTGCAACAGAAAATGACTA-----TTATTCAGTTAACAAACAAGGCC-TAAGTGGAGTATGAGCTCTGCACATCAGGAAGCTCTGTATGAATTCTAAATGAGGACAAATGTAAATCTTTAT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169925303 651 + 171630274 --GGAGATCACAGACAGAACAGGAGCTCACCAGGGGCCGTGGCAGAGGAGCAGGGTCAGCGTCCCCTCCTGCACCCATGGCCTCCAGCGCCCCCATCTCCCGGGGGGAGCTGCATGTTTCAGGGAACGTTCGGTTCATTTGTGAAATCACTCACTTCTGTTAG-AGGCATCCAAGGTCCCCAGACTG----------------------------------------------GAATGTTCCTCAGCAAGGGGCAGCGTACACAGGTAAGCACTTTCGTATTTTCTAGATAAACTAACAGGGTGAGCTGTAAATGGAGGCGTTCTTCTCAGGGGGAAAG-GCCCCGTTCTTAAAAGCTTGACTTTTCAGCTGTTCCATTTTGAGACTTTGTAATTCGGTTGAGCACAGGTGCGGTCATACTGGGCTGTGGCTGGGGATCTGAAGGTACTTTTCACTGGCTCATTGGGTTCCTTGTGTTTTGAATCTAACAGTTGATGATCATGGAATAAG--TCTGCCCAT-AGATAAACTGGGAGCTACAGTCAGAGATTGAGCCTGACGACTCCTCTTCTTGGCAGTTAACTGTTGTGTAACAGAAGATGACGGGTTATTTATTCAGTTAGCAAACGGGGCCTTCAGTGGAGTGCGAGCTCTGGGCATTAGGAAGCTCTGTGTGAGTTCTACATGAGGACACAT----ACCtttgt i calJac3.chr4 C 0 I 221 e canFam3.chr1 56204890 2167 + 122678785 I a score=591299.000000 s hg38.chr6_KB021644v2_alt 138952 215 + 185823 AAAAATTATCATAAACAATTTGGGCTCATAATACAACTACACATTATGAATGAACACTAAGTATTTAAACTTTTGTTAAGAAAATTTTT---ATTCGTTAAGAAATGAAGGTAATGGACAGTGATCAGTAATACCATCTGATAATGAGGTCAGCCTCATGCTAGCTTCTGTATTCTGGGCTAGCCTAAGGCAGACGTGTGATCACCTCACATTTCTTT s panTro4.chr6 170727452 215 + 172623881 AAAAATTATCATAAGCAATTTGGGCTCATAATACAACTACACATTATGAATGAACACTAAGTATTTAAACTTTTGTTAAGAAAATTTTT---ATTCGTTAAGAAATGAAGGTAATGGACAGTGATCAGTAATACCATCTGATAATGAGGTCAGCCGCATGCTAGCTTTTGTATTCTGGGCTAGCCTAAGGCAGACGTGTGATCACCTCGCATTTCTTT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172481842 215 + 174210431 AAAAATTGTCATAAAAAATTTGAGCTCATAATACAACTACACATTATGAATGAACACTAAGTATTTAAACTTTTGTTAAGAAAATTTTT---ATTTGTTAAGAAATGAAGGTAATGGACAGTGATCAGTAATACTATGTGATAATGAGGTCAGCCTCATGCTAGCTTCTGTATTCTGGGCTAGCCTAAGGCAGATGTGTGATCACCTTGCATTTCTTT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156341340 215 + 157873769 AAAAATTATCATAAACAATTGGGGCTCATAGTACAACTACATCTTATGAATGAACGCTAAGTGTTTAAACTTTTGTTAAGGAAATTTTT---ATTCATTAAGAAATGAAGGTAATGGACAGTAATCAGTAACACTATCTGACAATGAGGTCAGCCTCCTGCTAGCTTTTGTATTCTGGGCTAGCCTAAGGCAGACGTGTGATCATCTTGCATTTCTTT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168158062 218 + 169853907 AAAAATTATCATAAACAATTTGGGTTCATAATACAACTATACATTATGAATGAATACTAAGTATTTCAACTTTTGTTAAGAAACTTTTTATCATCCATTAAGAAATGAAGGTAATAGACAATGATCAATAATAATATCCGATAACGAGGTCAGCCTCATGCTTGCTTTTGTATTCTGGGCTAGCCTAAGGCAGACGTGTAATCACCTTGCATTTCTTT i rheMac3.chr4 C 0 I 24 s macFas5.chr4 169112675 218 - 170955103 AAAAATTATCATAAACAATTTGGGTTCATAATACAACTATACATTATGAATGAATACTAAGTATTTCAACTTTTGTTAAGAAACTTTTTATCATCCATTAAGAAATGAAGGTAATAGACAATGATCAATAATAATATCCGATAACGAGGTCAGCCTCATGCTTGCTTTTGTATTCTGGGCTAGCCTAAGGCAGACGTGTAATCACCTTGCATTTCTTT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163930760 218 + 165299245 aaaaattatcataaaCAATTTGGGTTCATAATACAACTATACATTATGAATGAATACTAAGTACTTCAACTTTTGTTAAGAAAATTTTTATCATCCATTAAGAAATGAAGGTAATAGACAGTGATCAATAATAATATCTGATAACGAGGTCAGCCTCATGCTTGCTTTTGTATTCTGGGCTAGCCTAAGGCAGACGTGTAATCaccttgcatttcttt i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96716394 218 + 98384682 AAAAATTATCATAAACAATTTGGGCTCATAATACAACTATACATTATGAATGAATACTAAGTATTTAAACTTTTGTTAAGAAAATTTTTATCATCCATTAAGAAATGAAGGTAATGGATAGTGATCAATAATACTATCTGATAATGAGGTCAGTCTCATGCTTGCTTTTGTATTCTGGGCTAGCCTAAGGCAGACGTGTAATCACCTTGCATTTCTTT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169926175 204 + 171630274 AGAAATTATGCTAAG----TTAGGCTCAAAATACAACTACACATTATGCATGAACACTAAATATTTACTCTTTCATTAAGAAACGTCTTATCATTCATTAAGAAATG-AGGTGGTGGACGGTCATCTGTA---------GATAACGGGGTCAGCCTCAAGCTGGCTTTTGCATTCTGGGCTAGCCTGAGGCAGACGCGTGATCACCTTGCATTTCTTC i calJac3.chr4 I 221 C 0 e canFam3.chr1 56204890 2167 + 122678785 I a score=15221.000000 s hg38.chr6_KB021644v2_alt 139167 10 + 185823 CCGTTGCTTT s panTro4.chr6 170727667 10 + 172623881 CCGTTGCTTT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172482057 10 + 174210431 CCGTTGCTTT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156341555 10 + 157873769 CCGTTGCTGT i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169112893 7 - 170955103 ---TTGTTTT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163930978 7 + 165299245 ---ttgtttt i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96716612 10 + 98384682 TCTCTGTTTT i chlSab2.chr13 C 0 I 17 s calJac3.chr4 169926379 10 + 171630274 CCATTGCTTT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56204890 2167 + 122678785 I e rheMac3.chr4 168158280 24 + 169853907 I a score=13582.000000 s hg38.chr6_KB021644v2_alt 139177 17 + 185823 ACCCGGCCTCGCCTAGG- s panTro4.chr6 170727677 17 + 172623881 ACCCGGCCTCGCCTAGG- i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172482067 17 + 174210431 ACCCGGCCTCGCCTAGG- i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156341565 17 + 157873769 ATCCAGCCTCGCCTAGG- i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169112900 16 - 170955103 -TCGGGCCTTTTCTAGG- i macFas5.chr4 C 0 I 1 s papAnu2.chr4 163930985 16 + 165299245 -tcaggccttttctagg- i papAnu2.chr4 C 0 I 1 s calJac3.chr4 169926389 13 + 171630274 -----ACCACCTCTGAGG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56204890 2167 + 122678785 I e chlSab2.chr13 96716622 17 + 98384682 I e rheMac3.chr4 168158280 24 + 169853907 I a score=662704.000000 s hg38.chr6_KB021644v2_alt 139194 223 + 185823 --TTCCCCTCCTTTCCTCCTGTGTGCCTCCCCTGCTGCCTACACCCAGCCTTGACTCTGCTGCTTCTCCCCTCCCAAGGCTGAGGGACCCTGACCACAATCATGCCTCAGACTCTGGGCTACCCTTTTTTC-CTCTCTGTCTTGGATTTTATTTTCTGCTTTCTAAAGTGTCATCATCATGCA--CTTTTTCTGAGGTCATACTTTTCTGGTGTCTAATGGAGAA-----GAT s panTro4.chr6 170727694 230 + 172623881 --TTCCCCTCCTTTCCTCCTGTGTGCCTCCCCTGCTGCCCACACCCAGCCTTGACTCTGCTGCTTCTCTCCTCCCAAGGCTGAGGGACCCTGACCACAATCATGCCTCAGACTCTGGGCTACCCTTTTTTC-CTCTCTGTCTTGGATTTTATTTTCTGCTTTCTAAAGTGTCATCATCATGCATTTTTTTTCTGAGGTCATACTTTTCTGGTGTCTAATGGAGAAGAATTGAT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172482084 229 + 174210431 --TTCCCCTCCTTTCCTCCTGCGTGCCTCCCCTGCTGCCCATACCCAGCCTTGACTCTGCTGCCTCTCCCCTCCCAAGGCTGAGGGACCCTGACCACAATCATGCCTCAGACTCTGGGCTACCCTTTTTTC-CTCTGTGTCTTGGATTTTATTTTCTGCTTTCTAAAGTGTCGTCATCATGCA-TTTTTTTCTGAGGTCATACTTTTCTGGTGTCTAATGGAGAAGAATTGAT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156341582 228 + 157873769 --TTCCCCTCCTTTCCTCCTGTGTGCCTCCCCTGCTGCCCACACCCAGCCTTGACTCTGCTGCCTCTCCCCTCCCAAGGCTGAGGGACCCTGACCACAATCCTGCCTCAGACTCTGGGCTACCCTTTTTTC-CTCTCTGTCTTGGATTTTATTTTCTGCTTTCTAAAGTGTCATCATCATGCA-TTTTTTTCTGAGGTCATACTTTCCTGGTGTCTAATGGAGAA-GATGGAT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168158304 229 + 169853907 --TTCCCTTCCTTTCCTCCTGTGTG-CTCCCCTGCTGCCCATACCCAGCATTGACTGTGCTGCCTCTCCCCTCCCAAGGCTGAGGGACCCTGACCGCAATCATGTCTCAGACTCTGGGCTGCCCTTTTTCCTCTCTCTGTCTTGGATTTTATTTTCTGCTTTCTAAAGTGTCATCATCGTGCA-TTTTTTTCTGAGGTCATACTTTTCTGGTGTCTAATGGAGAAGAATTGAT i rheMac3.chr4 I 24 C 0 s macFas5.chr4 169112917 229 - 170955103 --TTCCCTTCCTTTCCTCCTGTGTG-CTCCCCTGCTGCCCATACCCAGCATTGACTCTGCTGCCTCTCCCCTCCCAAGGCTGAGGGACCCTGACCGCAATCATGTCTCAGACTCTGGGCTGCCCTTTTTCCTCTCTCTGTCTTGGATTTTATTTTCTGCTTTCTAAAGTGTCATCATTGTGCA-TTTTTTTCTGAGGTTATGCTTTTCTGGTGTCTAATGGAGAAGAATTGAT i macFas5.chr4 I 1 C 0 s papAnu2.chr4 163931002 229 + 165299245 --ttcccttcctttcctcctgtgTG-CTCCCCTGCTGCCCATACCCAGCATTGACTCTGCTGCCTCTCCCCTCCCAAGGCTGAGGGACCCTGACCGCAATCATGTCTCAGACTCTGGGCTaccctttttcctctctctgtcttggattttattttctgctttctaaaGTGTCATcatcatgca-tttttttctgaggtCATACTTTTCTGGTGCCTAATGGAGAAGAATTGAT i papAnu2.chr4 I 1 C 0 s chlSab2.chr13 96716639 228 + 98384682 --TTCCCTTCCTTTCCTCCTATGTG--TCCCCTGCTGCCCATACCCAGCATTGACTCTGCTGCCTCTCCCCTCCCAAGGCTGAGGGACCCTGACTGCAATCATGTCTCAGACTCTGGGCTACCCTTTTTCCTCTCTCTGTCTTGGATTTTATTTTCTGCTTTCTAAAGTGTCATCATCATGCA-TTTTTTTCTGAGGTCATACTTTTCTGGTGTCTAATGGAGAAGAATTGAT i chlSab2.chr13 I 17 C 0 s calJac3.chr4 169926402 228 + 171630274 TTCTCCCCCTCTTGCCTCCTGTGGG-CCTCCCCGAGGCTCACACCCAGCCTCCACTCAGCTGCCTCTCCCCTCCCAAGGCTGAGGGAGCCTGACCACAATCATGCCTCAGAATCTAGGTTACCCTTTTTTC-CTCTCTGTCTTGGATTTTATTTTCTGCTTTCTAAAGTGTCGTCA---TGCATTTTTTTTCTGAGGGCATACATTTCTGGTGTCTAATAGTGAAGAAGTGAt i calJac3.chr4 C 0 I 487 e canFam3.chr1 56204890 2167 + 122678785 I a score=560493.000000 s hg38.chr6_KB021644v2_alt 139417 199 + 185823 AAAGATACTGAAGAAAACAGTATctaccaaattgggtactgtaagtccattgctaaattaagaactttacatatattatctcatgattacctctatgggagaaaatattattcctgctttacaggtgagaaaactgagactcagagaagataagtcacttggccaaagacacacagtcagttaatataggagccaggaC s panTro4.chr6 170727924 199 + 172623881 AAAGATACTGAAGAAAACAGTATctaccaaattgggtactgtaagtccattgctaaattaagaactttacatatattatctcatgattacctctatgggagaaaatattattcctactttacaggtgagaaaactgagactcagagaagataagtcacttggccaaagacacacagtcagttaatataggagccaggaC i panTro4.chr6 C 0 I 110 s ponAbe2.chr6 172482313 197 + 174210431 AAAGATACTGAAGAAAAC--TATctaccaaattgggtactataagtccattgctaaattaagaactttacatatattatctcatgattacctctatgggagaaaatattattcctactatacaggtgagaaaactgagactcagagaagataagtcacttggccaaagacacacagtcagttaatacaggagccaggat i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156341810 182 + 157873769 AAAGATACTGAAGAAAACAGTATCTACCAAATTGGGTACTATAAGTCAGTTACTAAATTAAGAA-----------------CATGATTACCTCTATGGGAGAAAAtattattcctactttacaggtgagaaaactgagacttagagaagataagtcacttggccaaagacacacagtcagttaatacaggagacaggat i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168158533 199 + 169853907 AATGATACTGAAGAAAACAGTATCTGCCCAATTGGGtaccataagtcaattactaaattaagaactttacctatattatctcatgattacctctatgggagaaaatattcttcctactttacaggtgagaaaactgagactcagagaagacaagtcacttggccaaagacacacagtcagttaatacaggagccaagtt i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169113146 199 - 170955103 AATGATACTGAAGAAAACAGTATCTACCCAATTGGGtaccataagtcaattactaaattaagaactttacctatattatctcatgattacctctatgggagaaaatattcttcctactttacaggtgagaaaactgagactcagagaagacaagtcacttggccaaaggcacacagtcagttaatacaggagccaagtt i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163931231 199 + 165299245 AAAGATACTGAAGAAAACAGTATGTACCCAATTGGGTACCATAAGTCAATTACTAAATTAAGAACTTTACCTATATTATCTCATGATTACCTCTATGGGGGAAAATATTATTCCtactttacaggtgagaaaactgagactcagagaagacAAGTCGCTTGGCCAAAGACACACAGTCAGTTAATACAGGAGCCAAGTT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96716867 199 + 98384682 GATGATACTGAAGAAAACAGTATCTACCCAATTGGGtaccataaatcaattactaaattaagaactttacctatattatctcatgattacgtctatgggagaaaatattattcctgctttactggtgagaaaactgagactcagagaagacaagtcacttagccaaagacacacggtcagttaatacaggagccaagtt i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169927117 190 + 171630274 aaaGATGCTGAAGAAAACAGTATctaccaaattgggtacggtaagtcaattacgaaattaagaactttacatatattacctcatgattgtctctatgggagaaaatattattcccaccttacaggtgagaaaaccgaggctcagag-----aagtcacttgtccaaagacaca----cagttagtacaggagccgggaG i calJac3.chr4 I 487 C 0 e canFam3.chr1 56204890 2167 + 122678785 I a score=1341536.000000 s hg38.chr6_KB021644v2_alt 139616 538 + 185823 GAGTGCACACTCATGAGCATTCTGTTAGAACACCAGGCA-TTTA-------------------------AAAACATGAATG------------------CAGAAAACCACA--------------TCAGTACGTACTCAgtgtgtgtgtgt--------gtgtgtttgtcc--ctgtgtATATACTTATATACGTACATATTC--atatatagggattggctatagggacttggattacacaactgtgggaactcctaaagcagcctgtgtcaggctgctgttatcaggctgaacctgacaccgggtcctgaagtttagaagccaggcattcaggaaggaacaatcacaagcctga-ctggaatcccattgggatgggctgaaacccatgtccattcctgttgcctctgactttggtgtgagcttcctgcagaagctgcccttttgctagcgcattacacacacatatctagcctgaagtcagaagagctgagagagaatccagtttaaaaaaaaaaaaaaaaaaaaa---aagctgttgcagaaccagctgctgcttcacaccgatgcagtgagtcagcggatcagctgcaa-gggtgtgagctactaaat--g s panTro4.chr6 170728233 550 + 172623881 GAGTGCACACTCGTGAGCATTCTGTTAGAACACCAGGCA-TTTA-------------------------AAAACATGAATG------------------CAGAAAACCACAACCAGAAAACCACTTCAGTATGTACTCAGTGTGTGTGTGT--------GTGTGTTTGTCC--CTGTGTATATACTTATATACGTACATATTC--atatatagggattggctatagggacttggattacacaactgtgggaactcctaaagcagcctgtgtcaggctgctgttatcaggctgaacctgacaccgggtcctgaagtttagaagccaggcattcaggaaggaacaatcacaagcctga-ctggaatcccattgggatgggctgaaacccatgtccattcctgttgcctctgactttggtgtgagcttcctgcagaagctgcccttttgctagcgcattacacacacacatctagcctgaagtcagaagagctgagagagaatccagtttaaaaaaaaaaaaaaaaaaaaa-----gcagttgcaggaccagctgctgcttcacaccgatgcagtgagtcagcggatcagctgcaa-gggtgtgagctactaaat--g i panTro4.chr6 I 110 C 0 s ponAbe2.chr6 172482510 560 + 174210431 GAGTGCACACTTGTAAGCATTCTGTTAGAACATCAGGCA-TTTA-------------------------AAAAAATGAACGCATCACTGATACTTCGACCAGAAAACCACA--------------TCAGTATGTACTCA--gtgtgtgtgt--------gtgtgtttgtcc--gtgtgtatatacttatatatgtACatatacatatatatagggattggctataggaacttggattacacaactgtgggaactcctaaagcagcctatgtcaggctgctgttatcaggctgaacctgacactgggtcctgaagtttagaagccaggcattcaggaagggacaatcacaagcctgagctggaatcccattgggatgcgctgaaacccatgtccattcctgttgcctctgactttggtgtgagcttcctgcagaagctgcccttttgctagggcattacacacacatatctagcctgaagtcagaagagctgagagagaatccactttaaaaaaaaaaaaaaaaaaaaaaaaaagcagttgcaggaccagctgctgcttcacactgatgcggtgagtcagcggatcagctgcaa-gggtgtgagctactaaat--g i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156341992 532 + 157873769 gagtacacaCTTGTAAGCATTCTGTTAGAACATCAGGCATTTTA-------------------------AAAAAATGAATGCATCACTGATGGTTCGACCAGAAAACCACA--------------TCAGTATGTACTC----------TCT--------GTGTGTTTGTCC--GTGTGTATATACTTatatatgtac--------atatatagggattggctatagggacttggattacacaactgtgggaactcttaaagcagcctatgtcaggctgctgttatcgggctgaacctgacactgggtcctgaagttgagaagccaggcattcaggaagggacgatcacaagcctaagctggaatcccattgggataggctgaaacccatgtccattcctgttgcctctgactttggtgtgagcttcctgcagaagctgcccttttgctagggcattacacacacatatctagcctgaaatcagaagagccgagagagaattcagtttaaaaaaaaaaaga-------------acagttgcaggaccagctgctgcttcacactgatgtggtgagtcagcggatcagctgcaa-gggtgtgagctactaaat--g i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168158732 539 + 169853907 gaatgcaCACTTGTAAGCCTTCTGTTAGAACACCAGGCA-TTTA-------------------------AAAAAATGAATGCATCGCAAATGGTTCGACCAGAAAACCACG--------------TTGGTATGTATTCAgtgtgtgtgtgt----------gtgtttgtccatgtgtgtgtATATCATTATATatacatatac--gtatatagggattggctatagggacttggattacacaactgtgggaacttctaatgcagcctatgtcaggctgttgttatcagactgaacctgacactgggtcttgaagttgagaagctaggcattcaggaagggacgatcacaggcctgagctggaatcccattgggatgagctgaaactcatgtccgttcctgttgcctctgact------tgagcttcctgcagaagctgccc-tttgctagggcattccacacacatatctagcctgaaggcagaagaggtgagagagaatccagtttttaaaaaaaga---------------gcagttgcaggaccagttgttgcttcacactgatgcggtgaatcagtggatcagcagcaacacgtgtgagctactaaatg-- i rheMac3.chr4 C 0 I 49 s macFas5.chr4 169113345 535 - 170955103 gaatgcaCACTTGTAAGCATTCTGTTAGAACACCAGGCA-TTTA-------------------------AAAAAATGAATGCATCGCAAATGGTTCGACCAGAAAACCACG--------------TTGGTATGTATTCAgtgtgtgtgtgt-------------tttgtccatgtgtgtgtATATCATTATATatacatatac--gtatatagggattggctatagggacttggattacacaactgtgggaactcctaaagcagcctatgtcaggctgttgttatcagactgaacctgacactgggtcctgaagttgagaagctaggcattcaggaagggacgatcacaggcctgagctggaatcccattgggatgagctgaaactcatgtccgttcctgttgcctctgact------tgagcttcctgcaaaagctgccc-tttgctagggcattacacacacatatctagcctgaaggcagaagagctgagagagaatccagtttaaaaaaaaaga---------------gcagttgcaggaccagttgttgcttcacactgatgcggtgaatcagtggatcagcagcaacacgtgtgagctactaaat--- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163931430 540 + 165299245 GAATGCACACTTGTAAGCATTCTGTTAGAACaccaggca-ttta-------------------------aaaaaatgaatgcatcACAAATGGTTCGACCAGAAAACCATG--------------TTGGTatgtattctgtgtgtgtgtgt--------gtgtgtttgtccatgtgtgtgtatatcattatatatacatatac--gtatataggGATTGGCTATAGGGACTTGGATTACACAACTGTGGGAACTCCTAAGGCAGCCTATGTCAGGCTGTTGTTATCAGACTGAACCTGACACTGGGTCTTGAAGTTGAGAAGCCAGGCATTCAGGAAGGGACGATCACAGGCCTGAGCTGGAATCCCATTGGGATGAGCTGAAACTCATGTCCGTTCCTGTTGCCTCTGACT------TGAGCTTCCTGCAGAAGCTGCCC-TTTGCTAGGgcattatacacacacatctagCCTGAAGGCAGAAGAGCTGAGAGAgaatccagtttaaaaaaaaaga---------------gcagttgCAGGACCAGTTGTTGCTTCACACTGATGCGGTGAATCAGTGGATCAACAGCAACACGTGTGAGCTACTAAAT--- i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96717066 554 + 98384682 gaatgcaCACTTGTAAGCATTCTATTAGAACACCAGGCA-TTTA-------------------------AAAAAAGGAATGCATC-CAAATGGTTCGACCAGAAAACCACA--------------TTGGTATGTATTCAgtgtgtgtgtgtgtgtgtgtgtgtgtTTGTCCACGTGTGTGTATATCATTATATatacatatac--gtatatagggattggctatagggacttggattacacaactgtgggaactcctagagcagcctatgtcaggctgttgttatcacactgaatctgacactggatcctgaagttgagaagccaggcattcaggaagggatgatcacaggcctgagctggaatcccattgggatgagctgaaactcatgtccattcctgttgcctctgactttgctgtgagcttcctgcagaagctgccc-tttgctagggcattacacacacatctctagcctgaaggcagaagagctgagaaagaatccagtttaaaaaaaaaga---------------gcaatttcaggaccagttgctacttcacaccgatgcggtgaatcagcggatcagcagcaactcgtgtgagctactaaat-g- i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169927307 562 + 171630274 AAATGCACACTTGTAAGCGTTCTGTTAGAACAGTAGCCG-TTTACAAGATGAACGAACAGTAGCCAATCAAAACATAAATGCATCACTGATGGTTCCACCAGAAAACCTCA--------------TCGGTATGTATTCAGCATGCGTCCGT--------GTCCGTGTGTGC--ATGTGGACTCA-CATTACATGTGGACAT----AGACACagggattgctcagagggacctggattgcacaaccgtgggagctcctagagaggcctatgccaggcc-ttgttgtgagactgcacctgtccccgggacctggagttgagaaggcaggcgttcaggaaggggcagtcacagg-ctgagctggaatcccaccgggatgggctgaggccgac-tccattcctgttgcctctgacgttgttgtgagcttcctgcagaagctgccc-ttctgtgaggcattatacacaca--tctagcctgaagtcggaagggctgagagaggatccaataagagaaagaaaga--------------gcagttttgggaccagctgctgcttgacaccactgtgg-gaattagcagatcagcagtgacgtgtgggagctcctaaat--g i calJac3.chr4 C 0 C 0 e canFam3.chr1 56204890 2167 + 122678785 I a score=29330.000000 s hg38.chr6_KB021644v2_alt 140154 18 + 185823 gctgctgcttcctctcca s panTro4.chr6 170728783 18 + 172623881 gctgctgcttcctctcca i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172483070 18 + 174210431 gctgctgcttcctctcca i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156342524 18 + 157873769 gctgctgcttcctctcca i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169113880 18 - 170955103 gtagctccatcttctaaa i macFas5.chr4 C 0 I 32 s papAnu2.chr4 163931970 18 + 165299245 GTAGCTCCATCTTCTAAA i papAnu2.chr4 C 0 I 32 s chlSab2.chr13 96717620 18 + 98384682 gctgccgcttcccctcca i chlSab2.chr13 C 0 I 65 s calJac3.chr4 169927869 18 + 171630274 gctgctgcctcctctccg i calJac3.chr4 C 0 C 0 e canFam3.chr1 56204890 2167 + 122678785 I e rheMac3.chr4 168159271 49 + 169853907 I a score=8637515.000000 s hg38.chr6_KB021644v2_alt 140172 3113 + 185823 tcttccaagtctcaaacaaacattttcttgtggtctaccttaaaaaga--cacatacgaaaggtggcttcagaggaatgtcattctgcctggctatgtcaagacgtttcaaagtcactacaATCACATGAAACAGAACT-ATGTCAGAGTAGTGGGGACACTTCTACATCTGGGGACACTCTTGCTGCATCTCAGAATTTTGTCTCATATGAGTTCCCCCAACCGTGCTTGTGCCACATGCCTTtcaacttaaaaatgataaggtctataaattttgaaagccaactttatttcttacagagggttacagccta-------cgaggtgctccttctgacaggctgggaagtatagcctctggcagggacctttagcaggcatttcaaaggagaaaaggtgagacaggaacttatgctgaaggggttggctcaacatacatattcaacagattataggaggagcgatgaatattcatgaaggtgtcctgacccat------tgaacaaacatgcatattacatatgacccatatttactctgaggtggagacttaacattcaaatgcatgacaattaagcct--tatatgtcacagtgtgaagtagggacac-aggcactcggtgcacagctgctgtaaaccagccagaaccagtccatggtcggtgac---ctcaacaggagacaggtattgaaatcagccccttgtcaatcaaagctatagttatggctggtggag-caggcggtcagtccacgtttcatgattggtaagctgcagttccttcaacattgcttatctcttggccagtgcttgtttagctgctagagaaaaataaaagccttgtgtcggtaagaacatagtttactcttttagcataggctgcatgacttaaccctttcctggcattgccttaggtcctattgataacttggcattttattgccacaaagagtcagtcctatcagtcttatgacctctattttaacattagtgctggtcagctgttgtgtctaaaccgcaaaaaggagtgggtataaggaggcgtgtctaacctcccatcccatcagggctgagaactaacatgtaaag-ttttctctggggtccccttggccaagagggggtgggttagtc----gcagggggctgaggattttatttttagttCTCATGCCATACTTGTTTACTCATT------------AGCatatttcaaaatttttcttatctaaatgtacctatatttgagaatatttctatgtcttcatgtttatcag---tttttttttcttctgtaacatgtgatcttccataaat-cccacccagtacagttttcatctcaaattattgttttcacttctggtaatctgatttgggcctttttgaaatcttccatctctcttcttagctttttgaacacatagagcatagttacaataatgattttaatcatcttatctgctatttgttcatttttatcaactgtggatgagttatgatctccttttctct--gcatcataaaacatgttttcttgcttctcttgatgtctggtaatttttgtctcagagctagacatagttatttttcttctt----at-gggacatgtttgccatcctattcttgagcttttctgggagagacagtaagttacttgaaagcagtttgattctgagccatttgagttttgctttttatatattttaggagagaccagagcagtgctttgtccagcccttgata-tttcccccagctgggcaaaccccttgtgcagcctctccaatgggctgtgcttctgaggcctttctgactagtgggaaaaggcaccattccaggcctgggtgagctgtgggcagtgtttctctcaatccttccagatggttctctccctgggagta-actaccttggcctcagatggttttttcccgtaggcacatgctgattaatattctgttgaatgctgcaggattacgct----------gggcagatcagtggagttctcattctggctctctcatctcagggactcactccagtagcctgcgtagccccttcggtcttcctgaggcctcagctctgcctcctctgctcagggagtcaccagggttcttctcggtttcctcctgtctgggctgtggcctggaaccccctcaaagcagcacctttgggccattgt--ggggctcagtgttttt--tactgcactctctcatgggtcactgccctttgttgctccatgtccagtgtctcaaaagcca-ttttaaatagattccatccctcttttggtaggagatggattaaatccctttcatacacttgaagcagaagtTATCCACTGGTATATATTTGCATATGTGTTC-----TTCCTACCGGTTTTATCGAATGTATCCGAATCATGAATGCCGTGTG-AGTCACACATTGTGAATCATGAACTTAGTGATGGCCAAGTAATAGGTTCTCACACAGCCAACATGAGGTTGGTGGTAAAGTCAAGGCCTCAGAAGTCTAAAGTTAACACACCACTACTTTTATGACCAGCAGAGACTGCTCAAAACGTTCCTAac-aatcacaaccacaaccacaacaacaagacaaacctacaaGTAGTCATCTAATTATTTTTCTGGAGTTTTAATACTACGACAACATTTAATGACTTTCTCTGTCTTAAGCAGAGGGTTGGGAAGTGATGCAGAATTTATCATTGGGATATGAGGTTTGTGCAAATCGTATGGAGTGTGATGGAGGTTGTGGAGGCAAGCAGGCCAGATTTGGGCCCGAACTCTGCATTCCATGAAgtgggactttggtggagtcataaaacatcaataagcttccacttcttttctgc-------------------------------------------------------------------------------aaatatagcagtattgcctgccatgcaaggctgttgcaaacactgagaaaatatataaatctcctatacagtAAGATCTCTAACAATGTTAACTACTACTGAATAATATTGCTATTGATT---TAATATTTAATACTATCGCTAT----TTTATTTGTAATATTGCCATTATTTATAATTTTATTACTAATAATCAAACACAACTCAAAATCAGAGAAAATATTTTTCCCAGAAACGTTTTCACTTTGCATACCTATGACCAGCAGAGGCTGCTCAAATCATGAACTTACTAATGCATCCAAAGTCCCACGTCATGGAAATATTCTCAGGATT s panTro4.chr6 170728801 3130 + 172623881 tcttccaagtctcaaacaaacactttcttgtggtctaccttaaaaaga--cacatacgaaaggtggcttcagaggaatgtcattctgcctggctatgtgaagacatttcaaagtcactacaATCACATGAAACAGAACT-ATGTCAGAGTAGTGGGGACACTTCTAGATCTGGGGACACTCTTGCTGCATCTCAGAATTTTGTCTCACGTGAGTTCCCCCAACCGTGCTTGTGCCACATGCCTTtcaacttaaaaatgataaggtctataaattttgaaagccaactttatttcttacagagggttacagccta-------cgaggtgctccttctgacaggctgggaagtatagcctctggcagggatctttagcaggcatttcaaaggagaaaaggtgagacaggaacttatgctgaaggggttggctcaacatacatattcaacagattataggaggagcgatgaatattcatgaaggtgtcctgacccatgtttattgaacaaacatgcatattacatatgatccatatttactctgaggtggagacttaacattcaaatgcattacaattaagcct--tatatgtcacagtgtgaagtagggacac-aggcactcggtgcacagctgctgtaaaccagccagaaccagtccgtggtcggtgac---ctcaacaggagacaggtattgaaatcagccccttgtcaatcaaagctatagttatggctggtggag-caggcggtcagtccacgtttcatgattggtgagctgcagttccttcaacattgcttatctcttggccagtgcttgtttagctgctagagaaaaataaaagccttgtgtcggtaagaacatagtttactcttttagtgtaggctgcgtgacttaaccctttcctggcattgccttaggtcctattgataacttggcattttattgccacaaagagtcagtcctatcagtcttatgacctctattttaacattagtgctggtcagctgttgtgtctaaaccacaaaaaggagtgggtataaggaggcgtgtctaacctcccatcccatcagggctgagaactaacatgtaaag-ttttctctggggtccccttggccaagagggggtgggttagtt----gcagggggctgaggattttatttttagttCTCATGCCATATTTGTTtactcatttttt-tatcattagcatatttcaaaatttttcttatcta--tgtatctatctttgagaatatttctatgtcttcatgtttatcag---tttttatttcttctgtaacatgtgatcttccataaat-cccacccagtacagttttcatctcaaattattgttttcacttctggtaatctgatttgggcctttttgaaatcttccatatctcttcttagctttttgaacacatagagcatagttacaataatgattttaatcatcttatctgctatttgttcatttttatcaactgtggatgagttatgatccccttttctctctgcatcataaaacatgttttcttgcttctcttgaagtctggtaatttttgtctcagagctagacatagttatttttcttcttgggtat-gggacatgtttgccatcctattcttgagcttttctgggagagacagtaagttacttgaaagcagtttgattctgagccatttgagttttgctttttatatattttaggagagaccagagcagtgctttgtccagccct-gata-tttcccccagctgggcaaaccccttgtgcagcctctccaatgggctgtgcttctgaggcctttctgactagtgggaaaaggcaccattccaggcctgggtgagctgtgggcagtgtttctctcaatccttccagatggttctctccctgggagta-actaccttggcctcagatggttttttcccgtaggcacatgctgattaatattctgttgaatgctgcaggattacgct----------gggcagatcagtggagttctcattctggctctctcatctcagggactcactccagtggcctgcgtagccccttcggtcttcctgaggcctcagctctgcctcctctgctaagggagtcaccagggttcttcttgctttcctcctgtctgggctgtggcctggaaccccctcaaagcagcacctttgggccattgt--ggggctcagtgttttt--tactgcactctctcatgggtcactgccctttgttgctccatgtccagtgtctcaaaagcca-ttttaaatagattccatccctcttttggtaggagatggattaaatccctttcatacacttgaagcagaagttatccactagtatatattTGCATATGTGTTC-----TCCCTACCGGTTTTATCAAATGTATCCGAATCATGAATGCCGTGTG-AGTCACACATTGTGAGTCATGAACTTAGTGATGGCCAAGTAATAGGTTATCAGACAGCCAACATGAGGTTGGTGGTAAAGACAAGGCCTCAGAAGCCTAAAGTTAACACACCTCTACTTTTATGACCAGCAGAGACTGCTCAAAACGTTCCTAAC-AATCACAACCACAACCACAACAACAAGACAAACCTACAAGTAGTCATCTAATTATTTTTCTGGAGTTTTAATACTACGACA---TTTAATGACTTTCTCTGTCTTAAGCAGAGGGTTGGGAAGTGATGCAGAATTTATCATTGGGATATGAGGTTTGTGCAAATCGTATGGAGTGTGATGGAGGTTGtggaggcaagcaggccagatttgggcccgaactctgcattccacgaagtgggactttggtggagtcataaaacatcaataagcttccactttttttctgc-------------------------------------------------------------------------------aaatatagcagtattgcctgccatgcaaggctgttgcaaacactgagaaaatatataaatctcctatacagtAAGATCTCTAACAATGTTAACTACTACTGAATAATATTGCTATTGATT---TAATATTTAGTACTATTGCTAT----TTTATTTGTAATATTGCCATTATTTATAATTTTATTACTAATAATCAAACACAACTCAAAATCAGAGAAAATATCTTTCCCAGAAATGTTTTTACTTTGCATACCTATGACCAGCAGAGGCTGCTCAAATCATGAACTTACTAATGCATCCAAAGTCCCACGTCATGGAAATATTCTCAGGATT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172483088 3134 + 174210431 tcttccaagtct----caaacattttcttgtggtctaccttaaaaaga--cacatacgaaaggtggcttcagaggaatgtcactctgcctggctatgtcaagacatttcaaagtcactacaATCACATGAAACAGAACT-ATGTCAGAGTAGTGGGGACACCTCTAGATCTGGGGACACTCTTGCTGCATCTCAGAATTTTGTCTCACATGAGTTCCCCCAACCATGCTTGTGCCACATGCCTTtcaacttaaaaatgataaggtctataaattttgaaagccaactttatttcttacagggggttacagccta-------tgaggtgctcattctgacaggctgggaagtatagccgctggcagggacctttagcaggcatttcaaaggagaaaatgtgaaacaggaacttacgctgaaggggttggctcaacatacatattcaacagattataggaggagctatgaatattcatgaaggtgtcctcatccatgtttattgaacaaacatgcatattacatatgacccatatt-----tgaggtagaaacttaacattcaaatgcattacaattaagcct--tttatgtcacagtgtgaagtagggacac-aggcactcagggcgcagctgctgtaaaccagccagaaccagtccatggttggtgaccttctcaacaggagacaggtattgaaatcagtcttttgtcaatcaaagctatagttatagctggtggag-caggtggtcagtccacgtttcatgattggtgaactgcaattccttcaacattgcttatctcttggccagtgctggtttagctgctagaaaaaaataaaagccttgtgtcagtaagaacctagtttactctttaagcgtaggctgcatgacttaaccctttcctggcattgtcttaggtcctattgataacttggcattttattgccacaaagagtcagtcctatcagtcttatgacctctattttaacattagtgctggtcagctgttgtgtctaaaccgcaaaaaggagtgggtataaggaggcgtgtctaacctcccatcccaccagggctgagaactaacatgtaaagtttttctctggggtcccctgggccaagaaggggtaggttagtcagttgcagggggctgaggattttatttttagttttcaTGCCATATTTGTTTACTCATTTTTT-TATCATCAGCatatttcaaaatttttcttatctaaatttatctatctttgagaatatttctatgtcttcatgtttatcag---tttgtttttcttctgtaacatgtgatcttccataaat-cccacccagtagagttttcatctcaaattattgttttcgcttctgcaaatctgatttgggcctttttgaaatcttccatatctcttcttagctttttgaacacatagagcatagttacaataatgattttaatc-----atctgctatttgtacatttttatcaactgtgaatgagttctgatcgccttttctct--gcatcataaaacacattttcttgcttctcttgatgtcttgtaatttttgtctcagtgctagacatagttatttttcttattggatat-gggacatgtttgccatcctattcttgagcttttctgggagagatagtaagttacttgaaagcagtttgattctgagccatttgagttttgctttttatatattttaggagagaccagagcagtgctttgtccagccct-gata-tttccctcagctgggcaaaccccttgtgcagcctctccaatgggctgtgcttctgaggcctttctgattagtgggaaaagacaccattccaggcctgggtgagttgtgggcagtgtttctttcaatccttccagatggttctctccctgggagta-actaccttggcctcagatggttttttcccataggcatatgctgatcaatattctgttgaatgctgcaggattaccctgggcagatcagggcagatcagtggagttctccttctggctctctcatctcagggactcactccagcggcctgcgtagccccttcggtcttcctgaggcctcagctctgcctccccagctcagggagtcaccagggttcttctcggtttcctcctgtctggactgtggcctggaaccccctcaaagcagcacctttgggccatcat--ggggctcagtgtttta--tactgcactctctcgtgggtcactgccctttgttgctccatgtccagtgtctcaaaagcca-ttttaaatagattccatccctcttttggtaggagatggattagatccctttcatacacttgaagtagaagttatccactagtatatattTGCATATGTGCTC-----TCCCTACCAGTTTTATCAAATGTATCCGAGTCATGAATGCCGTGTG-AGTCACACATTGTGAATCACGAACTTAGTGATGGCCAAGTAATAGGTTTTCACACAGCCAACATAAGGTTGGTGGTAAAGACAAGGCCTCAGAAGTCTAAAGTTAACACACCTCTACTTTTATGACCAGCAGAGACTGCTCAAAACGTTGCTAAAGAATCACAACCACAACCACAACAACAAGACAAACCTACAAGTAGTCATCTAATTCTTTTTCTGGAGTTTTAATACTACGACAACATTTAATGACTTTCTCTGTCTTAAGCAGAGGGTTGGGAAGTGATGCAGAATTTATCATTGGGATATGAGGTTTGTGCAAATCCTATGGAGTGTGATGGAggttgtggaggcaagcaggccagatttggacctgaactctgcattccatgaagtgggactttggtggagtcataaaacatcaataagcttccacttcttttctgc-------------------------------------------------------------------------------aaatataacagtattgcctgccacgcgaggctgttgcaaacactgagaaaatatataaatctcctatacagtaagagctgtaacaatgttaactattactgaataatattgctattGatt---taatatttaataatattgctat----tttatttgtaatattgccattatttataattttattactaat----aaaCACAACTCAAAATCAGAGAAAATATTTTTCCCAGAAACGTTTTCACTTTGCATACCTATGACCAGCAAAGGCTGCTCAAATCGTGAACTTAGTAATGCATCCAAAGTCCCACGTCATGGAAATAGTCTCAGGATT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156342542 3130 + 157873769 tcttccaagtctcaaacaaacattttcttgtggtctaccttaaaaaga--cacatacgaaaggtggcttcagaggaatgtcattctgcctggctatgtcaagacatttcaaagccactacaATCACATGAAACAGAACT-ATGTCAGAGTAGTGGGGACACCTCTACATCTGGGGACACTATTGCTGCATCTCAGAATTTTGTCTCATGTGAGTTCCCCCAACCATGCTTGTGCCACATGCCTTtcaacttaaaaatgataaagtctataaattttgaaagccaactttgtttcttacggagggttacggccta-------tgaggtgctcattctgacaggctgggaagtatagcctctggcagggacctttagcaggcatttcaaaggagaaaaggtgagacaggaacttatgctgaaggggttggctcaacatatatattcaacagattataggaggagctatgaatattcaggaaggtgtcctcactcatgtttattgaacaaacatgcatattacatatgacccatatttactttgaggtggagacttaacattcaaatgcattacaattaagctt--tgtatgtcacagtgtgaagtagggacac-aggcactcagtgcacagctgctgtaaaccagccagaaccggtccgtggtcggtgaccttctcaacaggagacaggtattgaaatcagcctcttgtcaatcaaagctatagttatgactggtggagccaggcggtcagtccacgtttcatgattggtgagctgcaattccttcaacattgcttatctcttggccagtgcttgtttagctgctagagaaaaataaaagccttgtgtcggtaagaacatagtttactctttaagtggaggctgcacgacttaaccctttcctggtattgccttaggtcctattgataacttggcgttttattgccacaaagagtcagtcctgtcagtcttaagacctctattttaacattagtgctggtcagctgttgtgtctaaactgcaaaaaggagtgggtataaggaagcatgtctgacctcccatcccaccagggctgagaactaacatgtaaag-ttttctctggggtccccttggccaagacggggtgggttagtcagttgcaggaggctgaggattttatttttagttCTCATGCCATACTTGTTGACTCATTTTTT-TATCATTAGCATATTGCAaaatttttcttacctaaatgtatctatctttgagaatatttctatgtcttcatgtttttcag---gttttttttcttctgtaacatgtgatcttccataaat-cccacccagtagagttttcatctcaaattattgttttcacttctggaaatctgatttgggcctttttgaaatcttccatatctcttcttacctttttaaacacatagagcatagttacaat-atgattttaatcatcttatctgctatttgtacatttttatcgactgtggatgagttctgatcgccttttctct--gcatcataaaacacgttttcttgcttctcttgatgtctggtaatttttgtctcagtgctagacattgttatttttcttattggatat-gggacatgtttaccaccctattcttgagcttttctgggagagac----agttacttgaaagcagtttgattctgagccatttgagttttgctttttatatattttaggagagaccagagcagtgctttctccagccct-gata-tttcccccagctgggcaaaccccttgtgcagcctctccaatggacggtgcttctgaggcctttctgactagtgggaaaaggcaccattccaggcctgggtgagctgtgggcagcatttctctcagtccttccagatggttctctctctgggagta-actaccttggcctcagatgg-tttttcccataggcatatgctgatcaatattctgttgaatgctgcaagattaccct----------cagcaaatcagtggagctctcattctagctctctcatctcagggactcactccagtggcctgtgtagcccctttggtcttcctgaggcctcagctctgcctcctatgctcaaggagtcaccagggttcttctctgtttcctcctgtctgggctgtggcctggaaccccctcaaagcagcacctttgggccattgt--gggactcagtgttttt--tacttcacgctctcatgggtcactgccctttgttgctgcatgtccagtgtctcaaaagcca-ttttagatatattctatccctcttttggtaggagatggattagatccctttcatacacttgaagcagaagttatccactagtatatattTGCATATATGTTC-----TCACTACCGATTTTATCAAATGTATCCGAGTCATGAATGCCGTGTG-AGTCACACATTGTGACTCATGAACTTAGTGATGGCCAAGTAATAGGTTCTCACACAGCCAACATGAGATTGGTGGTAAAGACAAGGCCTCAGAAGTCTAAAATTAACACACCTCTACTTTTATGACCAGCAGAGACTGCTCAAAACGTTGCTAAacaatcacaaccacaaccacaacgacaagacaaacctacaaGTAGTCATCTAATTCTTTTTCTGGAGTTTTAATACTACGACAACATTTAATGACTTTCTCTCTCTTAAGCAGAGGGTTGGGAAGTGATGCAGAATTTATCATTGGGGTATGAGGTTTGTGCAAATCCTATGGAGTGTGATGGAGGTTGTGGAGGCAAGCAGGCCAGATTTGGGCCCAAACTCTGCAttacttgtagtgggactttggtggagtcgtaaaacatccataagcttccacttcttttctgc-------------------------------------------------------------------------------aaatataacagtattgcctgccacaccaggctgttgcaaacgctgagaaaatatataaatctcctatacagtAAGAACTCTAACAATGTTAACTATTACTGAATAATATTGCTATTGATT---TAATATTTAA---TATTGCTAT----TTTATTTGTAATATTGCC---ATTCATAATTTTATTACTAATAATTAAACACAACTCAAAATCAGAGAAAATATTTTTCCCAGAAACGTTTTCACTTTGCGTACCTATGACCAGCAGAGGCTGCTCAAATCATGAACTTGGTAATACATCCAAAGTCCCACATCATGGAAATATTCTCAGGATT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168159320 3091 + 169853907 tgttccaagtctcaaacaaacattgtcttgtggtctaccttaaaaaga--tgcatacgaaaggtggattcagagaaatgtcgttctgcctggctatgtcaagacattttaaagtcact--aATCACATGAAACAGAACTCATGTCAGAGTAGTGGGGACACCTCTAGATCTGGGGACACTCTTGCTGGATCTCAGAATTTTGTCTCATGTGAGTTCCCACAGCCATGCTTTTGCCACATGTCTTtcaacttcagaatgataaggtctataaattttgaaagccaactttatttcttacagagggttagagccta-------tgaggtgc-------gacaggctgggaagtatagcctctggcagggacctttagcaggcatttcaaaagagaaaaggtgagacaggaacttatgctgaaggggttggctcaacacacatattcaacagattataggaggagctatgaatattcatgaaggtgtcccgacccatgtttattgaacaaacatgtgtattacatatgacccatgtttactttgaggtggagacttaacattcaaatgcattacaattaggcct--tatatgtcacagtgtgaagtgggga------------------cagatgctgtaaaccagccggaaccagtccagggtcagtgaccttctcaacaggagagaggtattgaaatcagcctcttgtcaatcaaagctatagttatggctggtggag-caggcggtcagtccacgtttcatgattggtgagctgcaattgcttcagcattgcttatctcttggccagtgcttgtttagctgctagagaaaaataaaagccttgtgttggtaagaacatagtttactctggaagtgtagggtgcgtgactttgccctttcctggcattgctttaggtcctattgataacttggtgttttattgccacaaagaatcagtcctgtcaatcttaggacctctattttaaccttagtgctggttggctgttgtgtctaaatcgcaaaagggagtgggtatagggaggcaagtctgacctcccataccaccagggctgagcactaacatgtaaag-ttttctctggggtccccttggccaagagtgggtggattagtt----gcagggggctgaggattttatttttagttCTCATGCCATATTTCTTTACCCATTTTTTAAATCATTAGCatatttcaaaacttttcttatctaaatgtatctatctttgagaatatttctatatctccatgtttatcagg--tttttttttcttctgtaacgtgtgatcttccataaat-cccacccagcagagttttcatctcaaaatattgttttctcttctggaaatttgatttgggcctttttgaaatcctccatttctcttcttagctttttgaacacatggagcacagttatgataatgtttttaatcatcttatctgctatctgtacatttttatcaattgtggaggagttctgatcgccttttgtct--gcatcataaaacacattttcttgcttctcttgatgtctggtaatttttgtctcagtgctagacatagttatttttcttattgggtatggggacatgtttgccatcctattcttgagcttttctgggagaggcggtaagttacttgaaagcaatttgattctgagccatttgagttttgctttgtatatatcttaggagagaccagagctgtgctttgtccagcccc-gata-tttcccccagctgggcaaaccccttgtgcaacctctccaatgggctgtgcttctgaggcctttctgactagtgggaaaaggcaccattccaggcctgggtgagctgtgggcactgtttctttcaatccttccagatggttccctccctgggagta-actaccttggcctcaggtgg-tttttcccataggcatgtgctgatcaatattctattgaatgctgcaggattaccctgggaagatcaggacagatcagtggagttctcattccaactctctcatctcagagactcactccagtggcctgcatagccccttcggtcttcctgaggcctcagctctgcctcctccgctcagggagtcacca-ggttcttctcggtttcctcccgtctgggctgtggcctggaaccccctcaaagcagcacctttgggccattgt--ggggctcagtgttttt--tgctttactctgtcatgggtcactgtcctttgttgctccatgtccagtgtctcaaaagcca-ttttaaatagattccatccctcttttggtaggagatggactagatccctttcatacacttgaagcagaagtTATCCACCAGCATATGTTTGCATATCTGTAC-----TCGCTACCAGTTT------------------------------------TCACACATTGTGAATCATGAACTTAGTAACGGCCACGTAATAGGTTCTCACACAGCCAACATGAGGTTGGTGGTAAAGACAAGGCCTCAGAAGTCTAAAGTTAACACAGCTCTACTTTTACGACCAGCAGAGACTGCTCAAAACGTTGCTAAC-AATCACAAGCACAATCACAACAACAAGGCAAACCTACAAGTAGTCATCTAATTATTTTTCTGGAGGTTTAAAACTACGACAACATTTAATGACTTTCTCTGTCTTAAGCAGAGGGTTGGGAAGTGATGCAGAATTTATCATTGGGATATGAGGTTTGTGCCAATCCTGTGGCATATGGCGGAGGTTGtggaggcaagcaggccagatttaggcccaaactcttcattctgtgaagtgggattttggtggagtcataaaacatcaataagcttccacttcttttctgc-------------------------------------------------------------------------------aaatataacagtatttcctgccacccaaggctggtgcaaacactgagaaaatttgtaaatctcctatacagtaagagctctaacaatgttaactgttatGGAATAATATTGCTATTGatt---taatatttaataatattgttattttatttatttataatattGCCATTATTTATCTTTTTCTTACTAATAATCAAACACAACTCAGAATCAGAGAAAATATTTTTCCCAGAAACGTTTTCACTTTGCGTACCTATGACCAGCAGAGACTGCTCAAATTGTGAACTTACTAATACGTCCAAAGTCCCATGTCATGGAAATATTCTCAGGATT i rheMac3.chr4 I 49 C 0 s macFas5.chr4 169113930 3091 - 170955103 tgttccaagtctcaaacaaacattgtcttgtggtctaccttaaaaaga--tgcatacgaaaggtggattcagagaaatgtcgttctgcctggctatgtcaagacattttaaagtcact--aATCACATGAAACAGAACTCATGTCAGAGTAGTGGGGACACCTCTAGATCTGGGGACACTCTTGCTGGATCTCAGAATTTTGTCTCATGTGAGTTCCCACAACCATGCTTTTGCCACATGACTTtcaacttcagaatgataaggtctataaattttgaaagccaactttatttcttacagagggttagagccta-------tgaggtgc-------gacaggctgggaagtatagcctctggcagggacctttagcaggcatttcaaaagagaaaaggtgagacaggaacttatgctgaaggagttggctcaacacacatattcaacagattataggaggagctacgaatattcatgaaggtgtcccgacccacgtttattgaacaaacatgggtattgcatatgacccatgtttactttgaggtggagacttaacattcaaatgtattacaattaggcct--tatatgtcacagtgtgaagtgggga------------------cagatgctgtaaaccagccagaaccagtccggggtcagtgaccttctcaacaggagagaggtattgaaatcaccctcttatcaatcaaagctatagttatggctggtggag-cagacggtcagtccacgtttcatgattggtgagctgcaattgcttcagcattgcttatctcttggccagtgcttgtttagctgctagagaaaaataaaagccttgtgttggtaagaacatagtttagtctggaagtgtagggtgcgtgactttgccctttcctggcattgctttaggtcctattgataacctggtgttttactgccacaaagaatcagtcctgtcagtcttacgaactctattttaacattagtgctggttggctgttgtgtttaaaccgcaaaagggagtgggtatagggaggcaagtctgacctcccataccaccagggctgagcactaacatgtaagg-ttttctctggggtccccttggccaagagtgggtgagttagtt----gcagggggctgaggattttatttttagttCTCATGCCATATTTCTTTACCCATTTTTAAAATCATTAGCatatttcaaaacttttcttatctaaatgtatctatctttgagaatatttctatatctccatgtttatcagg--tttttttttcttctgtaacgtgtgatcttccataaat-cccacccagcagagttttcatctcaaaatattgttttctcttctggaaatttgatttgggcctttttgaaatcctccatatctcttcttagctttttgaacacatggagcacagttatgataatgtttttaatcatcttatctgctatctgtacatttttatcaattgtggaggagttctgatcgccttttgtct--gcatcataaaacacaatttcttgcttctcttgatgtctggtaatttttgtctcagtgatagacatagttatttttcttattgggtatggggacatgtttgccatcctattcttgagcttttctgggagaggcggtaagttacttgaaagcaatttgattctgagccatttgagttttgctttgtatatatcttaggagagaccagagctgtgctttgtccagcccc-gata-tttcccccagctgggcaaaccccttgtgcaacctctccaatgggctgtgcttctgaggcctttctgactagtgggaaaaggcaccattccaggcctgggtgagctgtgggcactgtttctctcaatccttccagatggttccctccctgggagta-actaccttggcctcaggtgg-tttttcccataggcatgtgctgatcaatattctattgaatgctgcaggattaccctgggaagatcaggacagatcagtggagttctcattccagctctctcatctcagagactcactccagtggcctgcatagccccttcggtcttcctgaggcctcagctctgcctcctccgctcagggagtcacca-ggttcttctcggtttcctcccgtctgggttgtggcctggaaccccctcaaagcagcacctttgggccattgt--ggggctcagtgttttt--tgctttactctgtcatgggtcactgtcctttgttgctccatgtccagtgtctcaaaagcca-ttttaaatagattccatccctcttttggtAGGAGATGGACTAGATCCCTTTCATACACTTGAAGCAGAAGTTATCCACTAGCATATGTTTGCATATCTGTAC-----TCGCTACCAGTTT------------------------------------TCACACATTGTGAATCATGAACTTAGTAACGGCCACGTAATAGATTCTCACACAGCCAACATGAGGTTGGTGGTAAAGACAAGGCCTCAGAAGTCTAAAGTTAACACAGCTCTACTTTTACGACCAGCAGAGACTGCTCAAAACGTTGCTAAC-AATCACAAGCACAATCACAACAACAAGGCAAACCTACAAGTAGTCATCTAATTATTTTTCTGGAGGTTTAAAACTACGACAACATTTAATGACTTTCTCTGTCTTAAGCAGAGGGTTGGGAAGTGATGCAGAATTTATCATTGGGATATGAGGTTTGTGCCAATCCTGTGGCATATGGCGGAGGTTGTGGAGGCAAGCAGGCCAGATTTAGGCCCAAACTCTTCATTCTGTGAAGTGGGATTTTGGTGGAGTCATAAAACATCAATAAGCTTCCACTTCTTTTCTGC-------------------------------------------------------------------------------AAATATAACAGTATTTCCTGCCACCCGAGGCTGGTGCAAACACTGAGAAAATTTGTAAATCTCCTATACAGTAAGAGCTCTAACAATGTTAACTGTTATGGAATAATATTGCTATTGATT---TAATATTTAATAATATTGTTATTTTATTTATTTATAATATTGCCATTATTTATCTTTTTCTTACTAATAATCAAACACAACTCAGAATCAGAGAAAATATTTTTCCCAGAAACGTTTTCACTTTGCGTACCTATGACCAGCAGAGACTGCTCAAATTGTGAACTTACTAATACGTCCAAAGTCCCACGTCATGGAAATATTCTCAGGATT i macFas5.chr4 I 32 C 0 s papAnu2.chr4 163932020 3097 + 165299245 TGTTCCAAGTCTCAAACAAACATTGTCATGTGGTCTACCTTAAAAAGA--TGCATACGAAAGGTGGATTCAGAGAAATGTCGTTCTGCCTGGCTATGTCAAGACATTTTAAAGTCACT--AATCACATGAAACAGAACTCATGTCAGAGTAGTGGGGACACCTCTAGATCTGGGGACACTCTTGCTGGATCTCAGAATTTTGTCTCATGTGAGTTCCCACAACCATGCTTTTGCCACATGTCTTTCAATTTCAGGATGATAAGGTCTATAAATTTTGAAAGCCAACTTTATTTCTTACAGAGGGTTAGAGCCTACCAGGTGCGAGGTGC-------GACAGGCTGGGAAGTATAGCCTCTGGCAGGGACCTTTAGCAggcatttcaaaagagaaaaggtGAGACAGGAACTTATGCTGAAGGATTTGGCTCAACACACATATTCAACAGATTataggaggagctatgaatattcatgaaggtgTCCTGACCCATGTTTATTGAACAAACATGGGTATTGCATATGACCCATGTTTACTTTGAGGTGGAGACTTAACATTCAAATGTATTACAATTAGGCCT--TATATGTCACAGTGTGAAGTGGGGA------------------CAGATGCTGTAAACCAGCCAGAACCAGTCCAGGGTCAGTGACCTTCTCAACAGGAGAGAGGTATTGAAATCACCCTCTTATCAATCAAAGCTATAGTTATGGCTGGTAGAG-CAGACGGTCAGTCCACGTTTCATGATTGGTGAGCTGCAATTGCTTCAGCATTGCTTATCTCTTggccagtgcttgtttagctgctagagaaaaataaaagccttgTGTTGGTAAGAACATAGTTTAGTCTGGAAGTGTAGGGTGCGTGACTTTGCCCTTTCCTGGCATTGCTTTAGGTCATATTGATAACCTGGTGTTTTACTGCCACAAAGAATCAGTCCTGTCAGTCTTACGACCTCTATTTTAACATTAGTGCTGGTCGGCTGTTGTGTTTAAACTGCAAAAGGGAATGGGTATAGGGAGGCAAGTCTGACCTCCCATACCACCAGAGCTGAGCACTAACATGTAAAG-ttttctctggggtccccttggccaagagtgGGTGGGTTAGTT----GCAGGGGgctgaggattttatttttagttctcaagccatatttctttatccatttttaaaatcattagcaTATTTCAAAACTTTTCTTATCTAAATGTATCTATCTTTGAGAATATTTCTATATCTCCATgtttatcaggtttttttttttcttctgtaacatGTGATCTTCCATAAAT-CCCACCCAGCAGAGTTTTCATCTCAAAGTATTGTTTTCTCTTCTGGAAATTTGATTTGGGCCTTTTTGAAATCCTCCATATCTCTTCTTAGCTTTTTGAACACATGGAGCACAGTTATGATAATGTTTTTAATCATCTTATCTGCTATCTGTACATTTTTATCAATTGTGGAGGAGTTCTGATCGCCTTTTGTCT--GCAtcataaaacacattttcttgcttctcttgaTGTCTGGTAATTTTTGTCTCAGTGCTAGAcatagttatttttcttattgggTATGGGGACATGTTTGCCATCCTATTCTTGAGCTTTTCTGGGAGAGGCGGTAAGTTACTTGAAAGTAGTTTGATTCTGAGCCATTTGAGTTttgctttgtatatattttaggaGAGACCAGAGCCGTGCTTTGTCCAGCCCC-AATA-TTTCCCCCAGCTGGGCAAACCCCTTGTGCAACCTCTCCAATGGGCTGTGCTTCTGAGGCCTTTCTGACTAGTGGGAAAAGGCACCATTCCAGGCCTGGGTGAGCTGTGGGCACTGTTTCTCTCAGTCCTTCCAGATGGTTCCCTCCCTGGGAGTA-ACTACCTTGGCCTCAGGTGG-TTTTTCCCATAGGCATGTGCTGATCAATATTCTATTGAATGCTGCAGGATTACCCTGGGAAGATCAGGACAGATCAGTGGAGTTCTCATTCCAGCCCTCTCATCTCAGAGACTCACTCCAGTGGCCTGCGTAGCCCCTTTGGTCTTCCTGAGGcctcagctctgcctcctccGCTCAGGGAGTCACCA-GGTTCTTCTCGGTTTCCTCCCGTCTGGGCTGTGGCCTGGAACCCCCTCAAAGCAGCATCTTTGGGCCATTGT--GGGGCTCAGTGCTTTT--TGCTTTACTCTGTCATGGGTCACTGTACTTTGTTGCTCCATGTCCAGTGTCTCAAAAGCCA-TTTTAAATAGATTCCATCCCTCTTTTGGT---AGATGGATTAGATCCCTTTCATACACTTGAAGCAGAAGTTATCCACTAGTCTATGTTTGCATATGTGTAC-----TCACTACCAGTTT------------------------------------TCACACATTGTGAATCATGAACTTAGTAACGGCCACGTAATAGGTTCTCACACAGCCAACATGAGGTTGGTGGTAAAGACAAGGCCTCAGAAGTCTAAAGTTAACACAGCTCTACTTTTACGACCAGCAGAGACTGCTCAAAACGTTGCTAAC-AATCACAAGCACAACCACAACAACAAGGCAAACCTACAAGTAGTCATCTAATTCTTTTTCTGGAGTTTTAAAACTACGACAACATTTAATGACTTTCTCTGTCTTAAGCAGAGGGTTGGGAAGTGATGCAGAATTTATCATTGGGATATGAGGTTTGTGCCAATCCTGTGGCATATGGCGGAGGTTGTGGAGGCAAGCAGGCCAGATTTAGGCCCAATCTCTTCATCCCATGAAGTGGGATTTTGGTGGAGTCATAAAACATCAATAAGCTTCCACTTCTTTTCTGC-------------------------------------------------------------------------------AAATATAACACTATTTCCTGCCACGCGAGGCTGTTGCAAACACTGAGAAAATATGTAAATCTCCTATACAGTAAGAGCTCTAACAATGTTAACTGttatggaataatattgctattgatt---taatatttaataatattgttattttatttatttataatattgccattatttatctttttcttactaATAATCAAACACAACtcagaatcagagaaaatatttttcccagaagCGTTTTCACTTTGCGTACCTATGACCAGCAGAGACTGCTCAAATCGTGAACTTACTAATGCGTCCAAAGTCCCATGTCATGGAAATATTCTCAGGATT i papAnu2.chr4 I 32 C 0 s chlSab2.chr13 96717703 3070 + 98384682 tgttcCAAGTCTCAAACAAACATTTTCCTGTGGTCTACCTTAAAAAGACGCGCATATGAAAGGTGGATTCAGAGAAATGTCGTTCTGCCTGCCTATGTCAAGACATTTAAAAGTCACT--AATCACATGAAACAGAACTCATGTCAGAGTAGTGGGGGCACCTCTAGATCTGGGGACGCTCTTGCTGGATCTCAGAATTTTGTCTCATGTGAGTTCCCACAACCACGCTTTTGCCACATACCTTTCAGCCTCaaaatgataaggtctataaattttgaaagccaactttatttcttacagagggttagagccta-------cgaggtgc-------gacaggctgggaagtatagcctctggcagggacctttagcag---------aagagaaaaggtgagacaggaacttatgctgaaggggttggctcaacacacatattcaacaggttataggaggagctatgaatattcgtgaaggtgtcctgacccatgtttattgaacaaacatgcatattacatatgacccatgtttactttgaggtggagacttaacattcaaatgcattacaattaggcct--tatatgtcacagtgtgaagtgggga------------------cagatgctgtaaaccagccggaaccagtccagggtcagtgaccttctcaacagg-gagaggtattgaaatcagcctcttgtcaatcaaagctatagttacggcgggtggag-caggtggtcagtccacgtttcatgattggtgagctgtaattgcttcagcattgcttgtctcttggccagtgcttgtttagctgctagagaaaaataaaagccttgtgttggtaagaacatagtttactctggaagtgtagggtgcgtgactttgccctttcctggcattgctttaggtcctattgataacctggtgttttactgccacaaagaatcagtcctgtcagtcttacgacctctattttaacattagtgctggtcggctgttgtgtttaaaccgcaaaagggagtgggtatagggaggcaagtctgacctctgataccaccagggctgagcactaacaagtaaag-ttttctctggggtccccttggccaagagtgggtgggttagtt----gcagggggctgaggattttatttttagttCTCATGCCGTATTTCTTTACCCATTTTTTAAATCATTAGCatatttcaaaacttttcttatctaaatgtatttatctttgagaatatttctgtatctccatgtttatcagg--tttttttttcttctgtaacatgtgatcttccataaat-cccacccagtagagttttcgtctcaaagtattgttttcacttctggaaatttgatttgggcctttttgaaatcttccatatctcttcctagctttttgaacacatggagcacagttatgataatgattttaatcatcttatctgctatctgtacatttttatcaattgtggaggagttctgatcgccttttgtct--gcatcataaaacacattttcttgcttctcttgatgtctggtaatttttgtctcagtgctagacatagttatttttcttattgggtatggggacatgtttgccatcctattcttgagtttttctgggagaggcggtaagttacttgaaagcaatttgattctgagccatttgagttttgctttttatatattttaggagagaccagagccgtgctttgtccagcccc-gata-tttcccccagctgggcaaaccccttgtgcagcctctccaatgggctgtgcttctgaggcctttctgactagtgggaaaaggcaccattccaggcctgggtgagctgtggtcactgtttctctcaatctttccagatggttccctccctgggagta-actaccttggcctcaggtgg-tttttcccgtaggcatgtgctgatcaatattctattgaatgctgcaggattaccctgggaagatcaggacagatcagtggagttctcattccagctctctcatctcagagactcactccagtggcctgcgtagccccttcggtcttcctgaggcctcagctctgccttttccactcagggagtc-cca-ggttcttctcggtttcctcccgtctgggctgtggcctggaaccccctcaaagcagcacctttgggctgttgtgggggggtcagtgctttt--tgctttactctctcataagtcactgtcctttgtggctccatgtccagtgtctcaaaagcca-ttttaaatagattccatccctcttttggtaggagatggattagatccctttcatacacttgaagcagaagtTATCCACTAGCATATGTGTGCATATGTGTAC-----TCACTACCAGTTT------------------------------------TCACACATTGTGAATCATGAACTTAGTAACGGCCAAGTAATAGGTTCTCACACAGCCAACATGAGGTTGGTGGTAAAGACAAGGCCTCAGAAGTCTAAAGTTAACACAGCT---------CGACCAGCAGAGACTGCTCAAAACGTTGCTAac-aatcacaagcacaaccacaacaacaaggcaaacctacaaGTAGTCATCTAATTCTTTTTCTGGAGTTTTAAAACTACGACAACATTTAATGACTTTCTCTGTCTTAAGCAGAGGGTTGGGAAGTGATGCAGAATTTATCATTGGGATATGAGGTTTGTGCCAATCCTATGGCATATGACGGAGGTTGTGGAGGCAAGCAGGCCAGATTTAGGCCCAAACTCTTCATTCCATGAAGTGGGATTTTGGTGGAGTCATAAAACATCAATAAGCTTCCACTTCTTTTCTGC-------------------------------------------------------------------------------AAATATAGCAGTATTTCCTGCCACGCGAGGCTGTTGCAAACACTGAGAAAATATGTACATCTCCTATACAGTAAGAGCTCTAACAATATTAACTGTTATGGAATAATATTGCTATTGATT---TAATATTTAATAATATTG-----TTATTTATTTATAATATTGCCATTATTTATATTTTTCTTACTAACAATCAAACACAACTCAGAATCAGAGAAAATATTTTTCCCAGAAACGTTTTCACTTTGCGTACCTATGACCAGCAGAGACTGCTCAAATCGTGAACTTACTAATGCGTCCAAAGTCCCATGTCATGGAAGTATTCTCAGGATT i chlSab2.chr13 I 65 C 0 s calJac3.chr4 169927887 3172 + 171630274 gattccatgtctcaaacaaacattttcttgtgatctaccttaagaaga--cccatgagaaaggtggattcagagaaatgtagttctgtctggctgtgtcaacacatttcagagtcactacaGTCACATTAAACAGAACCCAGGTCACAGCAG-GGGGGCACCTCTAGATCTGGGGACACTCTGGCTGGATCTCAGAATTTTGTCTCGTGTGAGTTCCC-CGACCGTGGCAGTGCCACACGCCTTtcaactgaaatatgatgaggtctatacattttgaaagccaactc--tttcttacagagggttacagccta-------tgaggtgttcgctctggcaggctacgaagtatggcctctggcagggaccttgagcaggcgtttcaaaggagaaaatgggagacaggaactgatgctggcggggttggctcaatgcccatattcatcaggtgat-gggggaactatgaacattcacgaaggcctcctgacccatgttcactgaacagacatgcgtattacatatgacccatgcttacttagagatggagacttaacattcagatgcattacgattaggcctcgtatatgtcacgatgtgaagcagggacacaaggtactcagggcacagccgctgtaaaccagccagaaccagtccacggtcggtgaccttctcaacaggagacagccactgaaatcagcct--------------ctgtggtcacggccggcggaa-cgg--gggcactcagcatctcaggatgggccaaccgcc-tcgcttcagcagggcctagctcacggccggtg-ttgtt-----------------taagaagcttgtgttggtgagaacagagtttgctctttaagggtgggctgcatgacgtaatgctttcctgacatggccttgggtcctgtggataacttggtgttttgttgccacaaagggtcggtcctgtcagtctgatgacctgcattttaacatgagtgctggtca-ctg-tgtgtctcaacggcaaaagggagtgggaacaagggggcgtgtctgacctcc--tcccagcaggactgagaactgacatgtaaag-ttttctccggggtccccttggccaagagtgagtaggtttgtcagttgcaggggggtggggattttattttcagttCTCATGCTGTGCTTGTTtgctcttttt---tatcattagcatattt-agaacttttcttatccaaatgtgtctgtctttgagaatatttctatgtcttcgtgtctatcag-----tctttttcttctgtaac--gtgatcttccaggaatccccacctagtagagttttcatcccaaattattgctttcacttctgg-aatctgatctgggcctttttgaaatcttgcgtgtttcttcttagctttctggacacacagaacacaattacaataataattttaatcatcttatctgctatttgtacatttttatcaattgtggatgaatcctgatcgccttttctct--acatcataaaacaggttttcctgcttctcttgatgcctggtgatttttgtctgggtgctggaca--gttacttttcttactgggtgt-gggacacgtttgtcacgctg-tcttcagcttttcttggagaggcacagagttacttgaaagcagtttgattctgagcctttcgagttttgcttttcatatattttaggacatcccagagcagtgcttcatccagccct-gatattttcccccagctgggcaagacctttgtgcagcctctgcagtgggctgtgcttctgaggcctttctgactattgggaaaaggtaccgttccaggcccgggtgagctctgggcactgtttctctcagtcctt-cagatggttctttccctgggaatagattaccgtggcctcaggtgg-tttttcccacaggcgtgtgctgatcaatattctgttgaatgtt-caagattaccctgcacaggtcagggcaggtgagtggggttctcgctccaactctgtcgtcctggggactcactccagtggcctgtctagccctttccatcttcctgaggcctcaactctgcctcctccactcagggagtcaccagggctcttct--gtttcctcctgcctggtctgtggcctggaaccccctcacagcagcatctgtgggccattgt--ggggctcc-tgtttttaaaaatttattctctcatgggtcactggtctttgttgctctgtgtctggtgtctcaaaagccatttttaaatagattccatcCCTCTTCTGTTAAGAGATGGATTAGATCCCTTTTACATACGTGGAGCCGAAGTTATCCATGAGTATGTATTTGCATGTGTACACGCAAATCACTGCTAACTTCATCAAACGTAT-CAAGTCAGGAATGCCGTGTGAAGTCACTCGTTGCGAGCCATGAACTTGGTAATGGCCAAGTGCCAGGTTCTCACACAGCCAACATGGGGTCGGTGGGAAAGACAGGGCCTCGGAAGTCTAAACTTAACACAGGTCTACGTTTAGCACCAGCAGGGGCTGCTGGAAATGCTGCTAAACAACCACAACCACAACCATAACAATGA-ACAAACCCGTGCGCGGTCGTCTAATTC-----CTGCAATTTTAAAAGTGCGGCAACATCTAATGACTTTCTCTGTCTCAAGCAGAGGGTTGGGAAGGGATGTTGAGCGTGTCACTGGGATACGAGGTTTGTGC--ATCCTACGGCGCGTGACGGGGGTTGTGGAGGCACCAAGGCTGGGTTTCAGCCTGAACTCTGCATTCCATGAAGTGACACTTTGGTGGAGCCA-AAAGCATCAA-ACGCTTCTGCTGCTTTTCTACAAATGTAATAGTATCGCCCAAGTATTTTTACAAATAAAGTAACAGTTCGCCTGCCACGCGAGGCTACTTTTCTACAAATAAATGTAACAGTATCGCCTGCCACGCGAGGCTACTGCAAACACTGAGAAAAGGTATCCATCTTCTGTCCCATAAGCGCTCCAACAATGTTAACGGCTATTGAATAATATTGCCGTGGATTTAATAATATTTTATAACATTGCTAT----TTTACTCATAATATTGCCATTATTTATAATTTTCTTACTAAC-ATCAAACACAACTCAAAGTCAGAGAAAATAT-TCTCCCAGAGACGTTTTCATTTTGTGTACCTATGACCAGCAGAGGCCACTCAAATCGTGAAGTTAGTGA---GTCCAAAGTCCCAGGTCATGGAAACATTCTCAGAATT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56204890 2167 + 122678785 I a score=381531.000000 s hg38.chr6_KB021644v2_alt 143285 129 + 185823 TGTCATTGTTCATGGTTTTTCCCTCATAGGCCATAACTACTCCTCATTGTTGTCCAAGTGGGACTGAGAGT-TCCTTTCCACTTTGTCTGCAGGGTCTTCAAAGGCGTCCTTAGAAAAAGATTAATTCCA s panTro4.chr6 170731931 129 + 172623881 TGTCATTGCTCATGGTTTTTCCCTCATAGGCCATAACTACTCCTCATTGTTGTCCAAGTGGGACTGAGAGT-TCCTTTCCACTTTGTCTGCAGGGTCTTCAAAGGCGTCCTTAGAAAAAGATTAATTCCA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172486222 129 + 174210431 TGTCATTGCTCATGGTTTCTCCCTCGTAGGCCATAACTACTCCTCATTGTTGTCCAAGTGGGACTGAGAGT-TCCTTTCCACTTTGTCTGCAGGGTCTTCAAAGGTGTCCTTAGAAAAAGATTAATTCCA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156345672 129 + 157873769 TGTCATTACTCATGGTTTCTCCCTCGTAGGTCATAGCTACTCCTCATTGTTGTCCAAGTGGTACTGAGAGT-TCCTTTCCGCTTTGTCTGCAGGGTCTTCAAAGGCGTCCTTAGAAAAAGATTAATTCCA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168162411 129 + 169853907 TGTCACCGCTCATTGTTTCTCCCTCGTGGGCCATGACTACTCCTCATTGCTGTCCAAGTGGGACTCAGAGT-TCCTTTCCACTTGGTCTGCAGGGTCTTCAAAGGCGTCCTTAGAAAAAGATTAATTCCA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169117021 129 - 170955103 TGTCACCGCTCATTGTTTCTCCCTCGTGGGCCATGACTACTCCTCATTGCTGTCCAAGTGGGACTCAGAGT-TCCTTTCCACTTGGTCTGCAGGGTCTTCAAAGGCGTCCTTAGAAAAAGATTAATTCCA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163935117 129 + 165299245 TGTCACCGCTCATTGTTTCTCCCTCGTGGGCCATGACTGCTCCTCATTGCTGTCCAGGTGGGACTCAGAGT-TCCTTTCCACTTGGTCTGCAGGGTCTTCAAAGGCGTCCTTAGAAAAAGATTAATTCCA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96720773 129 + 98384682 TGTCACCGCTCATTGTTTCTCCCTCGTGGGCCATGACTACTACTCATTGCTGTCCAAGTGGGACTCAGAGT-TCCTTTCCACTTGGTCTGCAGGGTCTTCAAAGGCATCCTTAGAAAAAGATTAATTCCA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169931059 130 + 171630274 TGTCGTTTCTCATAGTCTCTCCCTCGCAGGACATAATGACTCTTCATTGCTGTCTCAGTGGCTTTGAGAGTGTCCTTTCCGCTTTGTCAGCAGGGTCTTCAAAGGCATCCTTCGAAGAGGATTCATTGTG i calJac3.chr4 C 0 I 316 s canFam3.chr1 56207057 123 + 122678785 TGTC-CTTTTCACGACATGTCCCTCATCAGCCATAATTAC-CTCCAGGGTTATCTGAATCAGACTGAGAGG-TGCCCTCCCGTCAGCC--CTGGGGGTTCAGATGCACAATGGGGACA--ATTAACTATG i canFam3.chr1 I 2167 C 0 a score=130531.000000 s hg38.chr6_KB021644v2_alt 143414 50 + 185823 --GTGTTTCTTATGCATGATCA------------TTTGATTTTATTCCCCTATGCCCAAGCGTT s panTro4.chr6 170732060 50 + 172623881 --GTGTTTCTTATGCATGATCA------------TTTGATTTTATTCCCCTATGCCCAAGCGTT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172486351 50 + 174210431 --GTATTTCTTATGCATGATCA------------TTTGATTTTATTACCCTATGCCCAAGCGTT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156345801 50 + 157873769 --GTATTTCCTATGCATGATCA------------TTTGATTTTACTCCCCTATGCCCAAGCGTT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168162540 50 + 169853907 --GTATGTCTTAGGCATAATCA------------TTTGATTTTATTCCACTATGCCCAAGAGTT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169117150 50 - 170955103 --GTATGTCTTAGGCATGATCA------------TTTGATTTTATTCCACTATGCCCAAGAGTT i macFas5.chr4 C 0 I 322 s papAnu2.chr4 163935246 50 + 165299245 --GTATGTCTTAGGCATGATCA------------TTTGATTTTATTCCACTATGCCCAAGGGCT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96720902 50 + 98384682 --GTATTTCTTAGACATGTTCA------------TTTGATTTTATTCCACTATGCCCAAGGGTT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169931505 50 + 171630274 --GTATTTCTTGGGCACGGTCC------------TCTGGTTTTCTTCCCCTCCGCCCGAGTGTT i calJac3.chr4 I 316 C 0 s canFam3.chr1 56207180 64 + 122678785 GTGTCACTTTCTGGCATGTGCACAGCTTCCACATTTTGACCTTGCTTCTCTGCAGCTTAATGTA i canFam3.chr1 C 0 C 0 a score=27012.000000 s hg38.chr6_KB021644v2_alt 143464 9 + 185823 AAGATGTTT s panTro4.chr6 170732110 9 + 172623881 AAGATGTTT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172486401 9 + 174210431 AAGATGTTT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156345851 9 + 157873769 AAGATGTTT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168162590 9 + 169853907 AAGATGTTT i rheMac3.chr4 C 0 I 323 s macFas5.chr4 169117522 9 - 170955103 aaGATGTTT i macFas5.chr4 I 322 C 0 s papAnu2.chr4 163935296 9 + 165299245 AAGATGTTT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96720952 9 + 98384682 AAGATGTTT i chlSab2.chr13 C 0 I 317 s calJac3.chr4 169931555 9 + 171630274 AAGATGGCT i calJac3.chr4 C 0 C 0 s canFam3.chr1 56207244 5 + 122678785 AAGAT---- i canFam3.chr1 C 0 C 0 a score=3221.000000 s hg38.chr6_KB021644v2_alt 143473 3 + 185823 TTT s panTro4.chr6 170732119 3 + 172623881 TTT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172486410 3 + 174210431 TTT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156345860 3 + 157873769 TTT i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169117531 2 - 170955103 -CT i macFas5.chr4 C 0 I 1 s papAnu2.chr4 163935305 2 + 165299245 -CT i papAnu2.chr4 C 0 I 326 s calJac3.chr4 169931564 3 + 171630274 TTT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56207249 0 + 122678785 C e chlSab2.chr13 96720961 317 + 98384682 I e rheMac3.chr4 168162599 323 + 169853907 I a score=5007.000000 s hg38.chr6_KB021644v2_alt 143476 3 + 185823 ATT s panTro4.chr6 170732122 3 + 172623881 ATT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172486413 3 + 174210431 ATT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156345863 3 + 157873769 ATT i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169117534 3 - 170955103 ATT i macFas5.chr4 I 1 C 0 s papAnu2.chr4 163935633 3 + 165299245 att i papAnu2.chr4 I 326 C 0 s canFam3.chr1 56207249 2 + 122678785 -TT i canFam3.chr1 C 0 C 0 e calJac3.chr4 169931567 0 + 171630274 C e chlSab2.chr13 96720961 317 + 98384682 I e rheMac3.chr4 168162599 323 + 169853907 I a score=1236616.000000 s hg38.chr6_KB021644v2_alt 143479 408 + 185823 TTTTTTT-CCTATTGGATCAAGTAGGCTATGTCCCAG---TGTATAAATCTCACTTATTACACAT-AAATAAACTTAAAATATGATTGAAATCTCTATATGTGCTTTCCACTGCGTCAGACGGAAGTTTGGAGACAGAAGTGGTTGAACACAGGTCAGACGAATCATACGCCCTTCGCCCTTCGCCCTCCCTA--CCTCAGAGGTCGGATGTGGTG-ATCGGGGCTTTCCACATGTCTGAAATGTCTG-ACATGGATGTGGtttttttaagcaaacttcttagaactctgttttattttacatttacagaaaaactgagaaagcagtactggaa-tcccacaagcccc-acaccactttctgatgccgtgaacgtttttcctggtgtggtgcatctgcctcagtcatagaagcagtgtt s panTro4.chr6 170732125 409 + 172623881 TTTTTTTTCCTATTGGATCAAGTAGGCTATGTCCCAG---TGTATAAATCTCACTTATTACACAT-AAATAAACTTAAAATATGATTGAAATCTCTATATGTGCTTTCCACTGCGTCAGACGGAAGTTTGGAGACAGAAGTGGTTGAACACAGGTCAGACGAATCATACGCCCTTCGCCCTTCGCCCTCCCTA--CCTCAGAGGTCGGATGTGGTG-ATCGGGGCTTTCCACATGTCTGAAATGTCTG-ACATGGATGTGGtttttttaagcaaacttcttagaactctgttttattttacatttacagaaaaactgagaaagcagtactggaa-tcccacaagcccc-acaccactttctgctgccgtgaacgtttttcctggtgtggtgcatctgcctcagtcatagaagcagtgtt i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172486416 399 + 174210431 TTTTTT--CCTGTTGGATCAAGTAGGCTATGTCCCAG---TGTATAAATCTCACTTATTACACAT-AAATAAACTTAAAATATGATTGAAATCTCTATATGTGGTTTCCACTGCATCAGACAGAAGTTTGGAGACAGAAGTGGTTGAATACAGGT-AGACGAATCATA-------TGCCCTTCGCCCTCCCCA--TCTCAGAGGTCAGATGTGGTG-ATCAGGGCTTTCCACATGTCTGAAATGTCTG-ACATGGATGTAGtttttttaagcaaacttcttagaactctgttttattttacatttacagaaaaattgagaaagcagtactggaa-tcccacgagcccc-acaccactttctgctgctgtgaacgtttttcctggtgtggtgcatctgcctcagtcatagaagcagtgtt i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156345866 400 + 157873769 TTTTTT--CCTATTGGATCAAGTAGACTATGTCCCAG---TGTATAAATCTCAGTTAATACACAT-AAATAAACTTAAAATATGACTGAAATCTCTACATGTGGTTTCCACTGCGTCAGACGGAAGTTTGGAGACAGAAGTCGTTGAATACAGGTCAGACGAATCATA-------CACCCTTCGCCCTCCCCA--TCTCAGAGGTCGGATGTGGTG-ATCGGGGCTTTCCACATGTCTGAAATGTCTG-ACATGGATGTGGCttttttaagcaaacttcttagaactctgttttattttacatttacagaaaaattgagaaagcagtactggaa-tcccacgagcccc-acaccactttctgctgctgtgaacgtttttcctggtgtggtgcatctgcctcagtcatagaagcagtgtt i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168162922 409 + 169853907 TTTTTTT-CCTATTGGATCAAGTAAGCTATGTCCCAG---TGTATAAATCTCACTTATTACACAT-AAATAAACTTAAAATATGATTGAAATCTCTGCATGTGGTTTCCACTGCGTCAGACAGAAGTTTGGAGACAGAAGTGGTTGAATACAGGTCAGACGAATCATACACCCTTCGCCCTTCGCCCTCCCCA--TCTTAGAGGTCGGATGTGGTGCGTCGGGGCTTTCCACATGTCTGAAACGTCTG-ACATGGAAGTGGtttttaaaaataaacttcttataactctgctttattttacatttacagaaaaattgagaaagcagtactggaa-tcccacgagcccc-ataccgctttctgctgctgtgattgttttccctggtgtggtgcgtctgcctcagtcatagaagcagtgtt i rheMac3.chr4 I 323 C 0 s macFas5.chr4 169117537 407 - 170955103 --TTTTT-CCTATTGGATCAAGTAAGCTATGTCCCAG---TGCATAAATCTCACTTATTACACAT-AAATAAACTTAAAATATGATTGAAATCTCTGCATGTGGTTTCCACTGCGTCAGACAGAAGTTTGGAGACAGAAGTGGTTGAATACAGGTCAGACGAATCATACACCCTTCGCCCTTCGCCCTCCCCA--TCTTAGAGGTCGGATGTGGTGCTTCGGGGCTTTCCACATGTCTGAAACGTCTG-ACATGGAAGTGGttttttaaaataaacttcttataactctgctttattttacatttacagaaaaattgagaaagcagtactggaa-tcccacgagcccc-acaccgctttctgctgctgtgattgttttccctggtgtggtgcgtctgcctcagtcatagaagcagtgtt i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163935636 407 + 165299245 --ttttt-cctattggatCAAGGAAGCTATGTCCCAG---TGTATAAATCTCACTTATTACacat-aaataaacttaaaatatgaTTGAAATCTCTGCATGTGGTTTCCACTGCGTCAGATAGAAGTTTGGAGACAGAAGTGGTTGAATACAGGTCAGACGAATCATACACCCTTCGCCCTTCGCCCTCCCCA--TCTTAGAGGTCGGATGTGGTGCATCGGGGCTTTCCACATGTCTGAAATGTCTG-ACATGgaagtggttttttaaaataaacttcttataactctgttttattttacatttacagaaaaattgagaaagcAGTACTGGAA-TCCCACGAGCCCC-ACACCGCTTTCTGCTGCTGTGATTGTTTTCCCTGGTGTGGTGCGTCTGCCTCAGTCATAGAAGCAGTGTT i papAnu2.chr4 C 0 T 18 s chlSab2.chr13 96721278 409 + 98384682 TTTTTTT-CCTATTGGATCAAGTAAGCTATGTCCCAG---TGTATAAATCTCACTTATTACACAT-AAATAAACTTAAAATATGATTGAAATCTCTGCATGTGGTTTCCACTGCGTCAGACAGAAGTTTGGAGACAGAAGTGGTTGAATACAGGTCAGACGAATCATACACCCTTTGCCCTTCGCCCTCCCCA--TCTTAGAGGTCGGATGTGGTGCATCGGGGCTTTCCACATGTCTGAAATGTCTG-ACATGGAAGTGGttttttaaaataaacttcttataactctgttttattttacatttacagaaaaattgagaaagcagtactggaa-tcccacgagcccc-acaccgctttctgctgctgtgatcgttttccctggtgtggtgcgtctgcctcagtcatagaagcagtgtt i chlSab2.chr13 I 317 C 0 s calJac3.chr4 169931567 377 + 171630274 ------T-CCTATTGGATCAAGTAGGCCATGTCCCAG---TGGATCAATCTC--TTATTACACAT-AAATGAACTCAGAATGTGATCGAAATGTCTACATGTGGTTTCCACCGCGTGGGACACAAGTGTGGAGACAGAAGCGGTTGAATCCAGGCCGGACGCCTCCTA-------CGCCCTTGGCCTTCCCTG--TCC-------------GGGTGCCTCGGGGCTTTCCGTGTGTCTGAAGTGCCTG-ACACAGAAGTGGtttttctaaacaaacctcttagaactttgttttattttagatttacagaaaaattgagaaagcgatacaggaa-cccca-gcgcccc-aca-cgctttctgctgctgtg--cgtttttcctggtgtggtgcgtctgtctcaatagtggaagcagcgtc i calJac3.chr4 C 0 C 0 s canFam3.chr1 56207251 402 + 122678785 TCTTTTT-CTTATGGGGACAAGTGGGCCA-GTCTATGACATTTACATAGCTCTGTCATTACAAATCAAATGCATGTACAATATGAGAAAAATGCCCAAGTGTGGTTTCCATTGCCTCAG--GGAAGTTCTGAGTCAGAGGCGGTGAAACTTCCGTCAGCAGAATG----------TACTGTGCACCCTTCCTACCCCTCAGACCTCCAGACGGCTACACTGGGACACTCAGCATGTCTGAAATGCCTGCATACTG-TGTGGTTTTCATAGCTGTAAATTATAGAACtttgttttattttagatttacagaagaactgagaaaacagtgcaggaagtcccataagcccctgcatcagtttctcctgttcacatc--tttccttagaatggtacctctgttacaattaatgaaccaacatt i canFam3.chr1 C 0 C 0 a score=5325.000000 s hg38.chr6_KB021644v2_alt 143887 3 + 185823 ggt s panTro4.chr6 170732534 3 + 172623881 ggt i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172486815 3 + 174210431 ggt i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156346266 3 + 157873769 ggt i nomLeu3.chr3 C 0 C 0 s chlSab2.chr13 96721687 3 + 98384682 ggt i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169931944 3 + 171630274 ggt i calJac3.chr4 C 0 C 0 s canFam3.chr1 56207653 3 + 122678785 gat i canFam3.chr1 C 0 I 40 e papAnu2.chr4 163936043 18 + 165299245 T e rheMac3.chr4 168163331 0 + 169853907 C e macFas5.chr4 169117944 0 - 170955103 C a score=125.000000 s hg38.chr6_KB021644v2_alt 143890 2 + 185823 aA s panTro4.chr6 170732537 2 + 172623881 aA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172486818 2 + 174210431 aA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156346269 2 + 157873769 aA i nomLeu3.chr3 C 0 C 0 s chlSab2.chr13 96721690 1 + 98384682 a- i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169931947 2 + 171630274 aa i calJac3.chr4 C 0 C 0 e canFam3.chr1 56207656 40 + 122678785 I e papAnu2.chr4 163936043 18 + 165299245 T e rheMac3.chr4 168163331 0 + 169853907 C e macFas5.chr4 169117944 0 - 170955103 C a score=3296.000000 s hg38.chr6_KB021644v2_alt 143892 4 + 185823 TCAG s panTro4.chr6 170732539 4 + 172623881 TCAG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172486820 4 + 174210431 TCAG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156346271 4 + 157873769 TCAG i nomLeu3.chr3 C 0 C 0 s calJac3.chr4 169931949 4 + 171630274 ttag i calJac3.chr4 C 0 C 0 e canFam3.chr1 56207656 40 + 122678785 I e chlSab2.chr13 96721691 0 + 98384682 C e papAnu2.chr4 163936043 18 + 165299245 T e rheMac3.chr4 168163331 0 + 169853907 C e macFas5.chr4 169117944 0 - 170955103 C a score=166437.000000 s hg38.chr6_KB021644v2_alt 143896 401 + 185823 CATCGTGGAGGCGGCGTCGGTGGTCAGCGTCGTG---------------------------------------------------------------------------------GAGGCCAGGTCAGTGGTCAGCGTCGTGGAGGTGGCGTCGGTGGTCAGC---------------------------GTCGTGGAGGCCAGGTCAGTGGTCAGCGTCGTGGAGGTGGCGTCGGTGGTCAGCGTCGTGGAGGCCAGGTCAGTGGTCAGCGTCGTGGAGGTGGCGTCGGTGGTCAGCGTCGTGGAGGCCAGGTCAGTGGTCAGCGTCGTGGAGGTGGCGTCGGTGGTCAGCGTCGTGGAGGCCAGGTCAGTGGTCAGCGTCGTGGAGGTGGCGTCGGTGGTCAGCATCGTGGAGGCCA-----------------------GGTCAGTGGTCAGCGTCGTGGAGGTGGCATCGGTAGTCAGTGTGGTGGAGGCAGCGTTGGTAATCAGCGTTGTGGAGGCCACGTTGGTAG s panTro4.chr6 170732543 509 + 172623881 CATCGTGGAGGCGGCGTCGGTGGTCAGCGTCGTGGAGGCCAGGTCAGTGGTCAGCATCGTGGAGGCGGCGTCGGTGGTCAGCATCGTGGAGGTGGCGTCGGTGGTCAGCGTCGTGGAGGCCAGGTCAGTGGTCAGCGTCGTGGAGGTGGCGTCGGTGGTCAGCATTGTGGAGGCAGCGTCGGTGGTCAGCGTCGTGGAGGCCAGGTCAGTGGTCAGCGTCGTGGAGGTGGCGTCGGTGGTCAGCGTCGTGGAGGCCAGGTCAGTGGTCAGCGTCGTGGAGGTGGCGTCGGTGGTCAGCGTCGTGGAGGCCAGGTCAGTGGTCAGCGTCGTGGAGGTGGCGTCGGTGGTCAGCATCGTGGAGGCCAGGTCAGTGGTCAGCGTCGTGGAGGTGGCGTCGGTGGTCAGCGTCGTGGAAGCCA-----------------------GGTCAGTGGTCAGCGTCGTGGAGGTGGCATCGGTAGTCAGGGTGGTGGAGGCAGCGTTGGTAATCAGCGTTGTGGAGGCCACGTTGGTAG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172486824 428 + 174210431 CGTCGTGGAGGCTGCATTGGTGGTCAGCGTCGTG------------------------------------------------------GAGGCGGCGTTGGTGGTCAGCGTCGTGGAGGCCAGGTCAGTGGTCAGCATCATGGAGGTGGCATCAGTAGTCAGCCTCGTGGAGGCGGCATTGGTGGTCAGCATCGTGGAGGCCAGGTCAGTGGTCAGCATCACGGAGGTGGCATCAGTAGTCAGCGTCGTGGAGGCGGCGTTGGTACTCAGCGTCGTGGAGGCGGCGTTGGTGGTCAGCGTCGTGGAGGCCAGGTCAGTGGTCAGCATCATGGAGGTGGCATCAGTAGTCAGCGTCGTGGAGGCTGTGTTGGTGGTCAGCGTCGTGGAGGCGGCGCTGGTGGTCAGCA--------------------------------------------------TCACGGAGGTGGCATCAGTAGTCAGCGTCGTGGAGGCGGCGTTGGTGGTCAGCGTCGTGGAGGCCACGTTGGTAG i ponAbe2.chr6 C 0 T 219 s nomLeu3.chr3 156346275 451 + 157873769 CATCGTGGAGGCGGCGTCGGTGGTCAGCGTCGTG---------------------------------------------------------------------------------GAGGCGGCGTCGGTGGTCAGCGTCGTGGAGGCGGCATTGGTGGTCAGCGCCATGGAGGCCAGGTCAGTGGTCAGCGTCGTggaggcggcgtcggtggtcagcgtcgtggaggcggcgtcggtggtcagcgtcgtggaggcggcATCGGTAATCAGCGTCGTGGAGGCGGTGTCGGTAGTCAGCATCGTGGAGGCGGCATTGGTAATCAATGTCGTGGAGGTCGCGTTGGTGGTCAGCATCGTGGAGGCGGCATTGGTAATCAATGTCGTGGAGGTCGCGTTGGTGGTCAGTGTCGTGGAGGCCACGTTGGTAGTGTCATGGAGGCAGCGTCGGTAATCAGCGTCGTGGGGGTGGCACTGGTAATCAGCGTTGCGGAGGCGGCATTGGTAGTCAGCGTCATGGAGGCCGTGTTGGTAG i nomLeu3.chr3 C 0 C 0 e calJac3.chr4 169931953 0 + 171630274 C e canFam3.chr1 56207656 40 + 122678785 I e chlSab2.chr13 96721691 0 + 98384682 C e papAnu2.chr4 163936043 18 + 165299245 T e rheMac3.chr4 168163331 0 + 169853907 C e macFas5.chr4 169117944 0 - 170955103 C a score=19547.000000 s hg38.chr6_KB021644v2_alt 144297 47 + 185823 AGTCATGGAGGCAGTGTCGGTAATCAGCGTTGTGGAGGCAGCGTCGT s panTro4.chr6 170733052 47 + 172623881 AGTCATGGAGGCAGTGTCGGTAATCAGCATTGTGGAGGCAGCGTCGG i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156346726 47 + 157873769 CGTCACGGAGGTGGCGTCAGTAGTCAGTGTCGTGGAGGCAGCGTTGG i nomLeu3.chr3 C 0 C 0 s papAnu2.chr4 163936025 47 + 165299245 AGTCATAGAAGCAGTGTTGGTAGTCAGCGTCGTGGAGGCGGTGTTGA i papAnu2.chr4 T 18 C 0 e calJac3.chr4 169931953 0 + 171630274 C e canFam3.chr1 56207656 40 + 122678785 I e chlSab2.chr13 96721691 0 + 98384682 C e rheMac3.chr4 168163331 0 + 169853907 C e ponAbe2.chr6 172487252 219 + 174210431 T e macFas5.chr4 169117944 0 - 170955103 C a score=6268.000000 s hg38.chr6_KB021644v2_alt 144344 12 + 185823 TAGTCAGCGTCA s panTro4.chr6 170733099 12 + 172623881 TAGTCAGCGTCA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172487033 12 + 174210431 TACTCAGCGTCG i ponAbe2.chr6 T 219 C 0 s nomLeu3.chr3 156346773 8 + 157873769 ----TAGCCTCA i nomLeu3.chr3 C 0 C 0 s papAnu2.chr4 163936072 12 + 165299245 TAATCAGCATCA i papAnu2.chr4 C 0 T 41 e calJac3.chr4 169931953 0 + 171630274 C e canFam3.chr1 56207656 40 + 122678785 I e chlSab2.chr13 96721691 0 + 98384682 C e rheMac3.chr4 168163331 0 + 169853907 C e macFas5.chr4 169117944 0 - 170955103 C a score=35993.000000 s hg38.chr6_KB021644v2_alt 144356 120 + 185823 TGGAGGCGGCGTTGGTGGTCACTGTCGTGGAGGCCACGTTGAT----AGCATCATGGAGGCAgcgtcggtagtcagcgtcgtgggggcggcgtcggtagtcagcgtcgtggaggcagtgtcggt s panTro4.chr6 170733111 93 + 172623881 TGGAGGCGGCGTTGGTGGTCACTGTCATGGAGGCCATGTTGAT----AGCATCATGGAGGCAGCGTCGGTAGTCAGCGTCGTGGGGGCGGC---------------------------GTCGGT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172487045 97 + 174210431 TGGAGGCGGCGTTGGTGGTCAGCGTCGTGGAGGCCAGGTCAGTGGTCAGCATCATGGAGGTGGCATCAGTAGTCAGCGTCGTGGAGGCTGT---------------------------GTTGGT i ponAbe2.chr6 C 0 I 110 s nomLeu3.chr3 156346781 124 + 157873769 TGGAGGCGGCATTGGTAGTCAGCATCATGGAGGCAGCGTCAGTAGTCAGTGTTGTGGAGGCAGCGTCAGTAGTCAGTGTTGTGGAGGTGGCATCGGTAGTCAGCGTCATGGAGGTGGCATTGGT i nomLeu3.chr3 C 0 I 27 e calJac3.chr4 169931953 0 + 171630274 C e canFam3.chr1 56207656 40 + 122678785 I e chlSab2.chr13 96721691 0 + 98384682 C e papAnu2.chr4 163936084 41 + 165299245 T e rheMac3.chr4 168163331 0 + 169853907 C e macFas5.chr4 169117944 0 - 170955103 C a score=12134.000000 s hg38.chr6_KB021644v2_alt 144476 102 + 185823 agcgtcgtggaggccgcgtcggtgttcagcgtcgtggaggccacattggtggcgtcatggaggcggcattggtagtcagcgtcg-------------------------------------------------------------------------------------tggaggcggcgtcggtag s panTro4.chr6 170733204 75 + 172623881 AGCGTCGTGGAGGCCGCGTCGGTGTTCAGCGTCGTGGAGGCCACGTTGGTGGCGTCATGGAGGCGGCATT----------------------------------------------------------------------------------------------------------------GGTAG i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156346932 187 + 157873769 AGCGTCATGGAGGCGGCGTCAGTATTCAGCATTGTGGAGGCGGCATTGGTAGCATCATGGAGGCGGCGTCGGTAGTCAGCGTCGTAGCGTTGTGGAGGTGGCATCAGTAGTCAGTGTCGTGGAGGCGGCGTCGGTGTTCAACATCGTGGAGGCCATGTTGGTAGCGTCATGGAGGTGGCGTTGGTAG i nomLeu3.chr3 I 27 C 0 e calJac3.chr4 169931953 0 + 171630274 C e canFam3.chr1 56207656 40 + 122678785 I e chlSab2.chr13 96721691 0 + 98384682 C e papAnu2.chr4 163936084 41 + 165299245 T e rheMac3.chr4 168163331 0 + 169853907 C e ponAbe2.chr6 172487142 110 + 174210431 I e macFas5.chr4 169117944 0 - 170955103 C a score=2292.000000 s hg38.chr6_KB021644v2_alt 144578 4 + 185823 tcag s panTro4.chr6 170733279 4 + 172623881 TCAG i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156347119 4 + 157873769 TCAG i nomLeu3.chr3 C 0 C 0 s chlSab2.chr13 96721691 4 + 98384682 TCAG i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169931953 0 + 171630274 C e canFam3.chr1 56207656 40 + 122678785 I e papAnu2.chr4 163936084 41 + 165299245 T e rheMac3.chr4 168163331 0 + 169853907 C e ponAbe2.chr6 172487142 110 + 174210431 I e macFas5.chr4 169117944 0 - 170955103 C a score=14262.000000 s hg38.chr6_KB021644v2_alt 144582 18 + 185823 cgtcgtggaggcggcgtc s panTro4.chr6 170733283 18 + 172623881 CGTCGTGGAGGCGGCGTC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172487252 18 + 174210431 CATCATGGAGGCGGTGTC i ponAbe2.chr6 I 110 C 0 s nomLeu3.chr3 156347123 18 + 157873769 CGTCGTGGAGGTGGCATC i nomLeu3.chr3 C 0 C 0 s chlSab2.chr13 96721695 18 + 98384682 CGTCGTGGAGGCGGCCTC i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169931953 0 + 171630274 C e canFam3.chr1 56207656 40 + 122678785 I e papAnu2.chr4 163936084 41 + 165299245 T e rheMac3.chr4 168163331 0 + 169853907 C e macFas5.chr4 169117944 0 - 170955103 C a score=86204.000000 s hg38.chr6_KB021644v2_alt 144600 36 + 185823 ggtagtcagcgtcATGGAGGCAGTGTTGATAATCAA s panTro4.chr6 170733301 36 + 172623881 GGTAGTCAGCGTCATGGAGGCAGTGTTGATAATCAA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172487270 36 + 174210431 GGTAGTCAGCGTCGTGGAGGCAGTGTTGATAATCAG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156347141 36 + 157873769 GGTAGTCAGCGTCATGGAGGCAGTGTTGATAATCAG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168163331 36 + 169853907 ggtagtcagcgtcgtggaggcggtgttgataatcag i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169117944 36 - 170955103 ggtaGTCAGCGTCGTGGAGGCGGTGTTGATAATCAG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163936043 36 + 165299245 GGTAGTCAGCGTCGTGGAGGCGGTGTTGATAATCAG i papAnu2.chr4 T 41 C 0 s chlSab2.chr13 96721713 36 + 98384682 GGCAGTCAGCGTCCGGGAGTCAGTGTTGATAATCAG i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169931953 0 + 171630274 C e canFam3.chr1 56207656 40 + 122678785 I a score=70545.000000 s hg38.chr6_KB021644v2_alt 144636 26 + 185823 CATCAGCTCAGGGCGTCCTTGATCCG s panTro4.chr6 170733337 26 + 172623881 CATCAGCTCAGGGCGTCCTTGATCCG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172487306 26 + 174210431 CATCAGCTCAGGGCGTCCTTGATCCG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156347177 26 + 157873769 CATCAGCTCAGGGTGTCCTTGATCCG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168163367 26 + 169853907 catcagctcagggcgtcctccatctg i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169117980 26 - 170955103 CATCAGCTCAGGGCGTCCTCCATCTG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163936079 26 + 165299245 CATCAGCTCAGGGCGTCCTTCATCGG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96721749 26 + 98384682 CATCAGCTCAGGGCGTCCTCCATCTG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169931953 24 + 171630274 catcagctgaggGCGTCCCC--TCAG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56207656 40 + 122678785 I a score=263729.000000 s hg38.chr6_KB021644v2_alt 144662 87 + 185823 CGTCC-CCT-CAGTCTTCCCTCCTGCGcaggatcccacgtgacacttagtcctcatgtctccgcagcttcctctgctctgtgacagttt s panTro4.chr6 170733363 87 + 172623881 CGTCC-CCT-CAGTCTTCCCTCCTGCGcaggatcccacgtgacacttagtcctcatgtctccgcagcttcctctgctctgtgacagttt i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172487332 87 + 174210431 TGTCC-CCT-CAGTCTTCCCTCCTGCccaggatcccacgtgatatttagtcctcatgtctccgcagcttcctctgctctgtgacagttt i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156347203 87 + 157873769 TGTCC-CCT-CAGTCTTCCCTCCTGCccaggatcccacgtgacacttagtcctcacatctccacagcttcctctgctctgtgacagttt i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168163393 85 + 169853907 tgtcc-cct-cagtcttccctcctgcccaggatcccacgtaacac--agtcctcacgtctccgcagcttcctctgctctgtgacagttt i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169118006 85 - 170955103 TGTCC-CCT-CAGTCTTCCCTCCTGCccaggatcccacgtaacac--agtcctcacgtctccgcagcttcctctgctctgtgacagttt i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163936105 87 + 165299245 TGTCC-CGT-CAGTCTTCCCTCCTGCCCAGGATCCCACCTAACACTTAGTCCGCACATCTCCACAGCTTCCTCTGCTCTGTGACAGTTT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96721775 87 + 98384682 TGTCC-CCT-CAGTCTTCCCTCCTGCccaggatcccacgtgacacttagtcctcacgtctccgcagcttcctctgctctgtgacagttt i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169931977 88 + 171630274 TCTTC-CCTCCCGCCTCCCCCACCGCccaggaccccacgtggcacttagtcctcacgtctctgcagcttcctctgcttgatgacggttt i calJac3.chr4 C 0 C 0 s canFam3.chr1 56207696 81 + 122678785 cgtccatcc-caaggtcccctc-----caggatcctac--agcagttagtgaccatatctcctgcctttcctatccactgtgaccattt i canFam3.chr1 I 40 I 54 a score=99334.000000 s hg38.chr6_KB021644v2_alt 144749 37 + 185823 GATGTGCTCTTTTCAAAGAATGTGTTTCA--GATTCTTC s panTro4.chr6 170733450 37 + 172623881 GATGTGCTCTTTTCAAAGAATGTGTTTCA--GATTCTTC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172487419 37 + 174210431 GACATGCTCTTTTCAAAGAATGTGTTTCA--GATTCTTC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156347290 37 + 157873769 GACGTGCTCTTTTCAAAGAATGTGTTTAA--GATTCTTC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168163478 37 + 169853907 GACGTGCTCTTTTTGAAGAATGTGTTTAA--GATTCTTC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169118091 37 - 170955103 GACGTGCTCTTTTTGAAGAATGTGTTTAA--GATTCTTC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163936192 37 + 165299245 GACGTGCTCTTTTTCAAGAACATGTTTAA--GATTCTTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96721862 37 + 98384682 GACGTGCTCTTTTTCAAGAATGTGTTTAA--GATTCTTC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169932065 39 + 171630274 GATGTGGTCTTTTTGAACAATGTGTTTAAATGACGCTTC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56207777 54 + 122678785 I a score=169389.000000 s hg38.chr6_KB021644v2_alt 144786 47 + 185823 TTAATTATTCCAAAAGCCCATTATCTAAAGTGGAATTCTAAATTTCC s panTro4.chr6 170733487 47 + 172623881 TTAATTATTCCAAAAGCCCATTATCTAAAGTGGAATTCTAAATTTCC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172487456 47 + 174210431 TTAATTATTCCAAAAGCCCATTACCTAAAGTGGAATTCTAAATCTCC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156347327 47 + 157873769 TTAATTATTCCAAAAGCACATTACCTAAAGTGAAATTCTAAATCTCC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168163515 47 + 169853907 TTAATTATTCCAAAAGCCCATTACCTAAAGTGGAATTCTAAATCTCC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169118128 47 - 170955103 TTAATTATTCCAAAAGCCCATTACCTAAAGTGGAATTCTAAATCTCC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163936229 47 + 165299245 TTAATTATTCCAAAAGCCCATTACCTAAAGTGGAATTCTAAATCTCC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96721899 47 + 98384682 TTAATTATTCCAAAAGCCCATTACCTAAAGTGGAATTCTAAATCTCC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169932104 47 + 171630274 TTAATTATTCCAAAAGTCCATTACCTAAAGTGGAATTCTAAATCTCC i calJac3.chr4 C 0 C 0 s canFam3.chr1 56207831 47 + 122678785 TCAACTATTCTTTAAACTTGCTACTGAAAGTGGAATTCTGAGATTCC i canFam3.chr1 I 54 I 4 a score=13428.000000 s hg38.chr6_KB021644v2_alt 144833 4 + 185823 CTTT s panTro4.chr6 170733534 4 + 172623881 CTTT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172487503 4 + 174210431 CTTT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156347374 4 + 157873769 CTTT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168163562 4 + 169853907 CTTT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169118175 4 - 170955103 CTTT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163936276 4 + 165299245 CTTT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96721946 4 + 98384682 CTTT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169932151 4 + 171630274 CTTT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56207878 4 + 122678785 I a score=11508.000000 s hg38.chr6_KB021644v2_alt 144837 7 + 185823 AAGACAT s panTro4.chr6 170733538 7 + 172623881 AAGAAAT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172487507 7 + 174210431 AAGAAAT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156347378 7 + 157873769 AAGAAAT i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169118179 7 - 170955103 aagaaat i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163936280 7 + 165299245 AAGaaat i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96721950 7 + 98384682 aagaaat i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169932155 6 + 171630274 AAGAAT- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56207878 4 + 122678785 I e rheMac3.chr4 168163566 0 + 169853907 C a score=5126.000000 s hg38.chr6_KB021644v2_alt 144844 11 + 185823 AAATAGCCAGg s panTro4.chr6 170733545 11 + 172623881 AAATAGCCAGg i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172487514 11 + 174210431 AAATAGCCAGg i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156347385 6 + 157873769 AAATAg----- i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169118186 5 - 170955103 aaata------ i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163936287 5 + 165299245 aaata------ i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96721957 11 + 98384682 aaataggcagg i chlSab2.chr13 C 0 I 514 e calJac3.chr4 169932161 0 + 171630274 C e canFam3.chr1 56207878 4 + 122678785 I e rheMac3.chr4 168163566 0 + 169853907 C a score=130022.000000 s hg38.chr6_KB021644v2_alt 144855 175 + 185823 gccaggcgcagtggctcactcctgtagtcccggcactttgggaggccgaggtgggc--agatcac--gaggtcaggagatcgagaccatcctgggctaacacggtgaaacactgtctctactaaaaaataca-----aaaaattcgccgggcgtggt-gacaggtac--------ctgtagtcccagctactc s panTro4.chr6 170733556 175 + 172623881 gccaggcgcagtggctcactcctgtagtcccagcactttgggaggccgaggcgggc--ggatcac--gaggtcaggagatcgagaccatcctgggctaacaccgtgaaacactgtctctactaaaaaataca-----aaaaattcgccaggcgtggt-gacaggtgc--------ctgtagtcccagctactc i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172487525 175 + 174210431 gccaggcgcggtggctcactcctgtagtctcagcactttgggaggccgaggcgggc--ggatcac--gatgtcaggagatcgagaccatcctgggctaacccagtgaaacaccgtctctactaaaaaataca-----aaaaattcgccaggcatggt-gacaggtgc--------ctgtagtgccagctactt i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156347391 147 + 157873769 --------------------cctgtaatcccagcactttgggaggctgaggggggc--agatcac--gaggtcaggagatcgagacca-------------cagtgaaaccccatctctactaaaaaaaaaaaatacaaaaattagccgggcgtggtgggtgggcac--------ctgtagt-ccagctactc i nomLeu3.chr3 C 0 M 305 s macFas5.chr4 169118191 180 - 170955103 gccaggcacagtggctcatgcctgtgatcccagcaccctgggaggctgaagcaggctgggttcacttaagcccaggggtccaagaccaacctgggc-aacatagtgaggccttatctctacaaaat-----------aaaaattgacaagatattgt-ggtgtaggctgttgaggccgtggccccaactactc i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163936292 180 + 165299245 gccaggcacagtggctcatgcctgtgatcccagcaccctgggaggctgaagcaggctgggttcacttaagcccaggggttcaagaccaacctgggc-aacatagtgaggccttatctctacaaaat-----------aaaaattgacaagatATTGT-GGTGTAGGCTGTCGAGGccgtggccccagctactc i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169932161 0 + 171630274 C e canFam3.chr1 56207878 4 + 122678785 I e chlSab2.chr13 96721968 514 + 98384682 I e rheMac3.chr4 168163566 0 + 169853907 C a score=13420.000000 s hg38.chr6_KB021644v2_alt 145030 18 + 185823 gggaggctgaggcatgag s panTro4.chr6 170733731 18 + 172623881 gggaggctgaggcatgag i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172487700 18 + 174210431 gggaggctgaggcaggag i ponAbe2.chr6 C 0 C 0 s macFas5.chr4 169118371 18 - 170955103 aggaggctgaggtgggag i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163936472 18 + 165299245 aggagactgaggtgggag i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169932161 0 + 171630274 C e canFam3.chr1 56207878 4 + 122678785 I e chlSab2.chr13 96721968 514 + 98384682 I e nomLeu3.chr3 156347538 305 + 157873769 M e rheMac3.chr4 168163566 0 + 169853907 C a score=104638.000000 s hg38.chr6_KB021644v2_alt 145048 110 + 185823 aatggtgtgaa-cccgggaggcagagcttgcagtgagccgagattgagccactgcactccagcctggatgacaaagcgagactccatctc-aaaaaaaa----------aaaaaaagacaga s panTro4.chr6 170733749 111 + 172623881 aatggtgtgaa-cccgggaggcagagcttgcagtgagtcgagattgagccactgcactccagcctggatgacaaagcgagactccatcgcaaaaaaaaa----------aaaaaaagacaga i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172487718 115 + 174210431 aatggtgtgaa-cccaggaggcagagcttgcagtgagccgagattgagccactgcactccagcctggatgacagagcaagactccatctc-aaaaaaaa-----taaataaataaaggaaga i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156347843 120 + 157873769 aatggcatgaa-cctgggaggcagagcttgaagtgagcagagattgagccactgcactccagcctggatgacagagcgagactccatctc-aaaaaaaaaaaaaaaaagaaagaaagaaaga i nomLeu3.chr3 M 305 C 0 s macFas5.chr4 169118389 113 - 170955103 gatggcttgagccccaggaggtggagactgcagtgagccaggatcgcaccactgtactccagcctgggtagcagagcaagaccttgtctc-agaaataa--------ataagaaaggaaaga i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163936490 113 + 165299245 gacggcttgagccccaggaggtagagcctgcagtgagccaggatcgcaccactgtactgcagcctgggtagcagagcaagaccttgtctc-agaaataa--------ataagaaaggaaaga i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169932161 0 + 171630274 C e canFam3.chr1 56207878 4 + 122678785 I e chlSab2.chr13 96721968 514 + 98384682 I e rheMac3.chr4 168163566 0 + 169853907 C a score=16293.000000 s hg38.chr6_KB021644v2_alt 145158 9 + 185823 aagaaagaa s panTro4.chr6 170733860 9 + 172623881 aagaaaGAA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172487833 9 + 174210431 aaGAAAGAA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156347963 9 + 157873769 aagaaagaa i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168163566 9 + 169853907 AAGAAATAA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169118502 9 - 170955103 aagaaagaa i macFas5.chr4 C 0 I 84 s papAnu2.chr4 163936603 9 + 165299245 aagaaagaa i papAnu2.chr4 C 0 I 92 e calJac3.chr4 169932161 0 + 171630274 C e canFam3.chr1 56207878 4 + 122678785 I e chlSab2.chr13 96721968 514 + 98384682 I a score=5730.000000 s hg38.chr6_KB021644v2_alt 145167 6 + 185823 ATAgcc s panTro4.chr6 170733869 6 + 172623881 ATAgcc i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172487842 6 + 174210431 ATagcc i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156347972 6 + 157873769 aTAgcc i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168163575 6 + 169853907 ATAgcc i rheMac3.chr4 C 0 C 0 e calJac3.chr4 169932161 0 + 171630274 C e canFam3.chr1 56207878 4 + 122678785 I e chlSab2.chr13 96721968 514 + 98384682 I e papAnu2.chr4 163936612 92 + 165299245 I e macFas5.chr4 169118511 84 - 170955103 I a score=349645.000000 s hg38.chr6_KB021644v2_alt 145173 291 + 185823 aggcacagtggctcatgcctgtgatcccagcaccttgggaggctgaggcaggctgggttcagttaagcccaggagttcaagaccaacctaggcaacatagtgaggccttatctctacaaaatacaaaggaaaattggccgaatatggtggtgcaggctgtcgaggctgtggccccagctactcaggagggtgaggtgggaggacggtttgagccccaggaggtggagcccgcagtgagccaggatcacaccactgtactccagcctgggtattagagcaagaccttgtctc s panTro4.chr6 170733875 291 + 172623881 aggcacagtggctcatgcctgtgatcccagcaccttcggaggctgaggcaggctgggttcagttaagcccaggagttcaagaccaacctaggcaacagagtgaggccttatctctacaaaatacaaaggaaaattggccgaatatggtggtataggctgtcgaggctgtggccccagctactcaggagggtgaggcgggaggacggtttgagccccaggaggtggagcccacagtgagccaggatcacaccactgtactccagcctgggtattagagcaagaccttgtctc i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172487848 291 + 174210431 aggcacggtggctcatgcctgtgatcccagcaccttgggaggctaaggcaggctgggttcacttaagcccaagagttcaagaccaacctaggcaacatagtgaggccttatctctacaaaatacaaatgaaaattggctggatatggtggtgtaggctgtcgaggctgtggccccagctactcaggagggtgaggtgggaggacggtttgagccccaggaggtggagcctgcagtgagccaggatcgcaccactgtactccagcctgggtagtagagcaagaccttgtctc i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156347978 291 + 157873769 aggcacggtggctcatgcctgtgatcccagcaccttgggagactgaggcaggctgggttcacttaagcccaggagttcaagaccaacctaggcaacatagtgaggccttatctctacaaaatacaaataaaaattggccagatatggtggtgttggctgtcgaggctgtggccccagctactcaggagggtgaggtgggaggacggtttgagccccaggagatggagcctgcagtgagccaggatcgcaccactgtactccagcctgggtagtagagcaagaccttgtctc i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168163581 285 + 169853907 aggcacagtggctcatgcctgtgatcccagcaccctgggaggctgaagcaggctgggttcacttaagcccaggggtccaagaccaacctgggcaacatagtgaggccttatctctacaaaata------aaaattgacaagatattgtggtgtaggctgttgaggccgtggccccaactactcaggaggctgaggtgggaggacggcttgagccccaggaggtggagcctgctgtgtgccaggatcgcaccactgtactccagcctgggtagcagagcaagaccttgtctc i rheMac3.chr4 C 0 C 0 s calJac3.chr4 169932161 283 + 171630274 Aggcatggtggctcacacctgtgatctcagcactttgggaggctgaggcagg--aggtgtgcttaagcctaggagttcaaaacccacctgggcaacacagcgaagccctatctctacgaaata------aaacttggccagatgtggtgttgtcggctttagaggctgtgatctcagctattcaggaggctaaggtgggaggatagcttgagccccaggagatggaggctgcagtgagccaggatcgcaccactgtactccagcctgggtagcagagcaaaaccttgtctc i calJac3.chr4 C 0 C 0 e canFam3.chr1 56207878 4 + 122678785 I e chlSab2.chr13 96721968 514 + 98384682 I e papAnu2.chr4 163936612 92 + 165299245 I e macFas5.chr4 169118511 84 - 170955103 I a score=1911.000000 s hg38.chr6_KB021644v2_alt 145464 1 + 185823 a s panTro4.chr6 170734166 1 + 172623881 a i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172488139 1 + 174210431 a i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156348269 1 + 157873769 a i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168163866 1 + 169853907 a i rheMac3.chr4 C 0 I 74 s papAnu2.chr4 163936704 1 + 165299245 a i papAnu2.chr4 I 92 C 0 s calJac3.chr4 169932444 1 + 171630274 a i calJac3.chr4 C 0 C 0 e canFam3.chr1 56207878 4 + 122678785 I e chlSab2.chr13 96721968 514 + 98384682 I e macFas5.chr4 169118511 84 - 170955103 I a score=-3860.000000 s hg38.chr6_KB021644v2_alt 145465 21 + 185823 gaaataaataaat-------------aataa--------at-a s panTro4.chr6 170734167 21 + 172623881 gaaataaataaat-------------aataa--------at-a i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172488140 11 + 174210431 gaaataaata--------------------------------a i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156348270 35 + 157873769 Gaaataaataaataaataaataaataaataa--------ataa i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168163941 29 + 169853907 gaaggaaagaaag-------------agaaagaaacaagga-a i rheMac3.chr4 I 74 C 0 s macFas5.chr4 169118595 21 - 170955103 gaaagaaagaaag-------------agaaa--------ga-a i macFas5.chr4 I 84 C 0 s papAnu2.chr4 163936705 15 + 165299245 gaaagaaacaag---------------------------ga-a i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169932445 19 + 171630274 taaacacataaat-------------aaata-----------a i calJac3.chr4 C 0 C 0 e canFam3.chr1 56207878 4 + 122678785 I e chlSab2.chr13 96721968 514 + 98384682 I a score=18940.000000 s hg38.chr6_KB021644v2_alt 145486 16 + 185823 ataaaTAAAAACTGAA s panTro4.chr6 170734188 16 + 172623881 ataaataaaAACTGAA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172488151 16 + 174210431 ataaataaaaaCTGAA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156348305 16 + 157873769 ataaataaataataaa i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168163970 16 + 169853907 acaaagaaaAACGTGA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169118616 16 - 170955103 acaaagaaaAACGTGA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163936720 16 + 165299245 acaaagaaaaacgtGA i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169932464 15 + 171630274 ataaGTGAATAATAA- i calJac3.chr4 C 0 C 0 s canFam3.chr1 56207882 16 + 122678785 ACAAAAATAAGTCAAA i canFam3.chr1 I 4 C 0 e chlSab2.chr13 96721968 514 + 98384682 I a score=264057.000000 s hg38.chr6_KB021644v2_alt 145502 89 + 185823 GTCCCATCCGACTTTGTT---TTGTAAAGTAGACATTTATC--TAACCCTTGCTGTGGTTGTTTGAGTTACAGAGCAGCGATGATCCTCCCAGG s panTro4.chr6 170734204 89 + 172623881 GTCCCATCTGACTTTGTT---TTGTAAAGTAGACATTTATT--TAACCCTTGTTGTGGTTGTTTGAGTTACAGAGCAGCGATGATCCTCCCAGG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172488167 89 + 174210431 GTCCCATCTGACTTTGTT---TTGTAAAGTAGACATTTATC--TAACCCTTATTGTGGTTGTTTGAGTTACAGAGCAGTGATGATCCTCCCAGG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156348321 89 + 157873769 GTCCCATCTGACTTTGTT---TTGTAAAGTAGACATTTATC--TAACCCTTGTTGTGGTTGTTTGAGTTACAGAGCAGCAATGATCCTCCCAGG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168163986 91 + 169853907 GTCCCATCTGACTTTGTT---TTGTAAAGCAGACACGTATCTATAACCCTTGTTGTGGTTGTTTAAGTTACAGAGCAGCGATGATCCTCCTGGG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169118632 91 - 170955103 GTCCCATCTGACTTTGTT---TTGTAAAGCAGACACGTATCTATAACCCTTGTTGTGGTTGTTTAAGTTACAGAGCAGCGATGATCCTCCTGGG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163936736 91 + 165299245 GTCCCATCTGACTTTGTT---TTGTAAAGCAGACATGTATCTATAACCCTTGTTGTGGTTGTTTAAGTTACAGAGCAGCGATGATCCTCCTGGG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96722482 91 + 98384682 GTCCCATCTGACTGTGTT---TTGTAAAGCAGACATGTATCTATAACCCTTGTTGTGGTTGTTTAAGTTACAGAGCAGCGGTGATCCTCCCCGG i chlSab2.chr13 I 514 C 0 s calJac3.chr4 169932479 79 + 171630274 ------TGTGACTTTGTT---TTGTAAATCAGATACGTATC--TAATCCTTGTTGTGG----TTAAGTTACAGAGCAGCAATCATCCTACAACC i calJac3.chr4 C 0 C 0 s canFam3.chr1 56207898 92 + 122678785 ATACTACCTGCCTTTGTTTTGTTGTAAAATAAAGACGTATA--TAATCCATATTATGACTACATGAGTCTCAGGGGAGTGATTACTTCTCCAAG i canFam3.chr1 C 0 I 219 a score=134569.000000 s hg38.chr6_KB021644v2_alt 145591 165 + 185823 TGAGGAGCCGTGTCC--TCTGTCCTCCTAGGTGGGAG---------------------------------------------------------------GCGGGGTCTTCTCTGTCCTCCCACGTGGGGAGCA-GGGTCTTCTCTGTCTTCCCGGGTGGGGAGC-AGGGTC------------------------------------------------------------TTCTCTGTCCTCCTGGGTGGGGAGCGGG---ATCCTCT--GTCCTCCTGAGTGGGGAGCAGGATC s panTro4.chr6 170734293 223 + 172623881 TGGGGAGCCGTGTCC--TCTGTCCTCCTAGGTGGGAG---------------------------------------------------------------GCGGGGTCTTCTCTGTCCTCCCACATGGGGAGCA-GGGTCTTCTCTGTCTTCCTGGGTGGGGAGC-GGGATCCTCTGTCCTCCTAGGTGGGGAGCGGGGTCCTCTCTGTCCTCCTGGGTGGGGAGCGGGA--TCCTCTGTCCTCCTGGGTGGGGAGCGGG---ATCCTCT--GTCCTCCTGAGTGGGGAGCGGGATC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172488256 167 + 174210431 TGAGGAACAGTGTCC--TCTGTCCTCCTAGGTGGGAG---------------------------------------------------------------GCGGGGTCTTCTCTGTACTCCCACGTGGGGAGCAGGGGTCCTCTCTGTCTTCCCAGGTGGGGAGCAGGGGTC------------------------------------------------------------CTCTCTGTCCTCCTGGGTGGGGAGCGGG---ATTCTCT--GTCCTCCTGAGTGGGGAGCAGGATC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156348410 196 + 157873769 TGAGGAGCGGTGTCC--TCTGTCCTCCTAGGTGGGAG---------------------------------------------------------------GCGGGGTCTTCTCTGTCTTCCGGAGTGGGGAGCA-GGGTCCTCTCTGTCTTCCGGAGTGGGGAGC-AGGGTC-----------------------------CTCTCTGTCTTCCGGAGTGGGGAGCAGGGTCCTCTCTGCCCCCCCAGGTGGGGAGCGGG---ATCCTCT--GTCCTCCTGAGTGGGGAGCAGGATC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168164077 127 + 169853907 TGAGGAGCGGGGTCC---------TCCCGGGTGAGGA---------------------------------------------------------------GCAGAGTCCT--CTGTCTTCCTGGGTGAGAATCG-GGGTCCTCACTGTCCTCCCGGGTGGGGAGC-GGGGTC------------------------------------------------------------CTCTCCGTCCTCCTGGGTGGGGAGCGGG----------------------------------GTC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169118723 127 - 170955103 TGAGGAGCGGGGTCC---------TCCCGGGTGAGGA---------------------------------------------------------------GCAGAGTCCT----------------------------------CTGTCTTCCTGGGTGAGAATC-GGGGTC------------------------------------------------------------CT-CACTGTCCTCCCGGGTGGGGAGCGGGGTCCTCTCC--GGCCTCCCGGGTGGGGAGCGGTGTC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163936827 65 + 165299245 TGAGAAGCGGAGTCC---------TCCCGGGTGAGGA---------------------------------------------------------------GCAGAGTCCT----------------------------------CTGTCTTCCTGGGTGAGAATC-GGG-----------------------------------------------------------------------------------------------------------------------------GTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96722573 103 + 98384682 TGAGGAGCAGAGTCC--TCTGTCTTCCTGGGTGAGAA---------------------------------------------------------------GCGGGGTCCTCTCTGACCTGCCGGGTGGGGAGCG-GGGTCCTCTCTGTCCTGCCGGGTGGGGAGA-GGGG------------------------------------------------------------------------------------------------------------------------------- i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169932558 232 + 171630274 TGGGGAGCGGGGTTCCCTCTGTCCTCCCGGGTGGGGATTGTGGTCCTCTCTGTCCCCCTGGGTGAGGATTGGGGGTCTCCTCTGTCCTTTTGGGGGAAATTTGGGGTCCTCTCTGTCCTCCTGTGTGGGGAGCA-GGATCCTTTCTGTTGTCCTGGGTGGGGAAC-ACGGTC------------------------------------------------------------CTCTCTATCCTCCTGAGTGGGGACTGGG---GTCCTCTCCATCCTCCCGGGTGGGGATTGGGGTC i calJac3.chr4 C 0 I 223 e canFam3.chr1 56207990 219 + 122678785 I a score=215091.000000 s hg38.chr6_KB021644v2_alt 145756 97 + 185823 CTCT--GTCCTCCTAGGTGGGGACTGGGGTCCTCTCTGCCCTC--------------------------------CCAGGTGGGAAGCGGAATCCTCTCTGTCCTCCCGGG-TG-------------------------------GGGAGCGGGGTCCTCTCT s panTro4.chr6 170734516 128 + 172623881 CTCT--GTCCTCCTAGGTGGGGAGCGGGGTCCTCTCTGCCCTC--------------------------------CCAGGTGGGAAGCGGGATCCTCTCTGTCCTCCCGGG-TGGGAATCAGGATCCTCTCTGTCCTCCTGGGTAGGGAGTGGGGtcctctct i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172488423 159 + 174210431 TTCT--GTCCTCCTAGGTGGGAAGTGGGATCCTCTCTGCCCTCCCAGGT-GGGAAGCGGGATCCTCTCTCCCCTGCCAGGTGGGAAGCGGGATCCTCTCTGTCCTCCCAGG-TGGGGAGCGGGATCCTCTCTGTCCTCCCGGGTGGGGAGTGGGGtcctctct i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156348606 97 + 157873769 CTCT--GTCCTCCTAGGTGGGGAGCGGGGTCCTCTCTGCCCCC--------------------------------CCGGGTGGGGAGCGGGGTCCTCTCTATCCTCCCGGG-TG-------------------------------GGGAGCGGGGGCCTCTCT i nomLeu3.chr3 C 0 I 274 s rheMac3.chr4 168164204 99 + 169853907 CTCTCCGTCCTCCCGGGTGGGGAGCGGGGTCCTCTCCGTCCTC--------------------------------CCGGGTGGGGAGCGGGGTCCTCTCCGTCCTCCCGGG-TG-------------------------------GGGAGCGGGGtcctctct i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169118850 99 - 170955103 CTCTCCGTCCTCCCGGGTGGGGAGCGGGGTCCTCTCTGTCCTC--------------------------------CCGGGTGGGGAGCGGGGTCCTCTCTGTCCTCCCGGG-TG-------------------------------GGGAGCGGGGtcctctct i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163936892 99 + 165299245 CTCTCTGTCCTCCCGGGTGGAGAGCGGTGTCCTCTCCATCCTC--------------------------------CCGGGTGGGGAGTGGGGTCCTCTCTGTCCTCCCGGG-TG-------------------------------GGGAGCGGGGtcctctct i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96722676 70 + 98384682 -----------------------------TCCTCTCTGTCCTG--------------------------------CCGGGTGGGGAGCGGGGTCCTCTCTGTTCTCCCGGG-TG-------------------------------GGGAGCGGGGTCCTCTCT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169933013 130 + 171630274 CTCT--GCCCTCCTGGGTGGGGACTGGGGTCCCCTCCATCCTCTCGGGTAGGGGAATAGGGTCCTCTCTGTCCTCCTGGGTGGGGACTGGGGTCCTCTCCATCCTCCCGGGTTG-------------------------------GGGAGCAGGGCCCTCTCT i calJac3.chr4 I 223 C 0 e canFam3.chr1 56207990 219 + 122678785 I a score=57287.000000 s hg38.chr6_KB021644v2_alt 145853 34 + 185823 GCAGCTCTCCCTGTCTCTGTCTGCCCGCTCTCCA s panTro4.chr6 170734644 34 + 172623881 gcagctctccctgtctctgtctcctcgctctcca i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172488582 34 + 174210431 gcagctctccctgtctctgtctccccgctctcca i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168164303 34 + 169853907 gcagctcctcctgtctctgtctcccccctttcct i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169118949 34 - 170955103 gcagctcctcctgtctctgtctcccccctttcct i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163936991 34 + 165299245 gcagctcctcctgcctctgtctcccctctttcct i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96722746 34 + 98384682 GCAGCTCCTCCTGTCTCTGTCTCCCCCCTTTCCC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169933143 19 + 171630274 GCAGCTCTCCCCATCTCCT--------------- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56207990 219 + 122678785 I e nomLeu3.chr3 156348703 274 + 157873769 I a score=111529.000000 s hg38.chr6_KB021644v2_alt 145887 40 + 185823 CCTCTCCTGCTTTCTTGTGCTCTTCCTCTTCCCTGCTTCT s panTro4.chr6 170734678 40 + 172623881 cctctcctgctttcttgtgctcttcttcttccctgcttct i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172488616 40 + 174210431 cctcacctgctttcttgtgctctttctcttccctgcttct i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156348977 40 + 157873769 CCTCTCCTGCTTTCTTGTGCTCTTCCTCTTCCCTGCTTCT i nomLeu3.chr3 I 274 C 0 s rheMac3.chr4 168164337 40 + 169853907 cctctcctgctttcacgtgctcctcttcttccctgcttct i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169118983 40 - 170955103 cctctcctgctttcacgtgctcctcttcttccctgcttct i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163937025 40 + 165299245 cctctcctgctttcatatgctcctcctcttgcctgcttct i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96722780 40 + 98384682 CCTCTCCTGCTTTCATATGCCCCTCTTCTTCCCTGCTTCT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169933162 40 + 171630274 CCTCTCCTGTGGTCATGCACACCTCCTCTTCCCTGCTTCT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56207990 219 + 122678785 I a score=574921.000000 s hg38.chr6_KB021644v2_alt 145927 182 + 185823 CTCCTCTTCCTTCTTTTCTTCTCCCTGCTTC--TCTCTTTGTCTGACTTGCCC-CTTCTCAG-GAGTGCATATCCTCACA--CAATCTCCACCACAAGCATG---TTCTGGTATTTCAGAATTTTTTTTTTTAGCCAAATCTTCAAAATTCCGTAAACTTTGGTTTCCTTGAGTCAAAAATGTAGAACATT s panTro4.chr6 170734718 182 + 172623881 ctcctcttccttcttttcttctccctgcctc--tcTCTTTGTCTGACTTGCCC-CTTCTCAG-GAGTGCATATCCTCACA--CAATCTCCACCACAAGCATG---TTCTGGTATTTCAGAATTTTTTTTTTTAGCCAAATCTTCAAAATTCCGTAAACTTTGGTTTCCTTGAGTCAAAAATGTAGAAGATT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172488656 182 + 174210431 ctcctcttccttcttttcttctccctgcctc--tcTCTTTGTCTGACTTGCCC-CTTCTCAG-GAGTGCGTATCCTCACA--CAATCTCCACCACAAGCATG---TTCTGCTATTTCAGAATTTTTTTTTTTAGCCAAATCTTCAAAATTCCGTAAACTTTGGTTTCCTTGAGTCAAAAATGTAGAAGATT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156349017 181 + 157873769 CTGCTCTTCCTGCTTTTCTTCTCCCTGCCTC--TCTCTTTGTCTGACTTGCCC-CTTCTCGG-GAGTGCATAGCCTCACA--CAATCTCCACCACAAGCACG---TTCTGCTATTTCAGAA-TTTTTTTTTTAGCCAAATCTTCAAAGTTCCGTAAACTTTGGTTTCCTTGAGTCAAATATGTAGAAGATT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168164377 180 + 169853907 ctcctcttccttgttttcttctccctgcctc--accctttgtctGACTTGCCC-CTTCTCAG-GAGTGCATATCCTCACA--CAATCTCCACCACAAGCATG---TTCTGCCATTTCAGAA--TTTTTTTTTAGCCAAATCTTCAAAATTCCATAAACTTTGGTTTCCTTGAGTCAAAAATGTAGAAGCTT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169119023 182 - 170955103 ctcctcttccttcttttcttctccctgcctc--tccCTTTGTCTGACTTGCCC-CTTCTCAG-GAGTGCATATCCTCACA--CAATCTCCACCACAAGCATG---TTGTGCCATTTCAGAATTTTTTTTTTTAGCCAAATCTTCAAAATTCCATAAACTTTGGTTTCCTTGAGTCAAAAATGTAGAAGCTT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163937065 182 + 165299245 ctcctcttccttcttttcttctccctgcctc--tccctttgtctgacttgccc-cttctcAG-GAGTGCATATCCTCACA--CAATCTCCACCACAAGCATG---TTCTgccatttcagaatttttttttttagccaaatCTTCAAAATTCCATAAACTTTGGTTTCCTTGAGTCAAAAATGTAGAAGCTT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96722820 182 + 98384682 CTCCTCTTCCTTCTTTCCTTCTCCCTGCCTC--TCCCTTTGTCTGACTTGCCC-CTTCTCAG-GAGTGCATATCCTCACA--CAATCTCCACCACAAGCATG---TTCTGCCATTTCAGAACTTTTTTTTTTAGCCAAATCTTCAAAATTCCATAAACTTTGGTTTCCTTGAGTCAAAAATGTAGAAGATT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169933202 187 + 171630274 CTCCCCTTCCTTCTTTCCGTCTCCCTGCACTAGCTTCTCTCTCTGACTTGCCC-TTTCTCAG-GAGAGCATATCCTCACCATTAAACTTCACCACAAGCACGTTCTTCTGCTATTTCAGA--TTTTTTTTTTAGCCAAATCTTCAAAATTCTGTAACCTTTGGTTTCCTTGGGTCAACAGTGTAGGAGATT i calJac3.chr4 C 0 C 0 s canFam3.chr1 56208209 171 + 122678785 CTCCTTCTCCCTCT-------------CACC--TCCCTCTTGCTAATATGTTCACATCACAGAAAATGCACATCCTCACA--ATATCTTTACCTAAAGTATG---ATCTCCTAATTCAGAACTGGCTGCTGTAGCCAAACTCTTAAAATCCTGCGAGCTTTCGTTTCTTCAGCTCAAAAATACGGCAGACT i canFam3.chr1 I 219 I 313 a score=2371429.000000 s hg38.chr6_KB021644v2_alt 146109 846 + 185823 CTAATACTCGTtgtga----tagtactgagtgccaacttgactggattgaagggcacaaagtattgtcctggctgtgtccatgagggtgttgccaaaggagattaccatttgagtcagtgggctgggagaggcaggcccaccctcaatgtgggtggccaccatctaatcagccgccggcttggct-----aggataaaagcaggcagaggaacgtggaaggactggactggctgagtcttcctgcctccatctttctcccgtgctggatgcttcctgccctcgaacatcagactccaagttcttcagcttttggactcttggaccttggactt-acactagtggtttgccaggggctctcgtgccttcggccacagactgaaggctgcactgtcggtttccctacttttgagg-tttgggacttggactggcttccttgctcctcagcttgcagatggtctattgtgggacttcaccttctgattgtgtgagttaattctcctaataaactccctttcatgtatacatctatccta------ctagtcctctagagaaccctcactaatacaCTC-ACCTTGGCGAGTTATTGAGAGAATTAAGTCAAATAACAGAATCAAAAGACTGACTCATGTCAGGAGCTGAAAGATCCAGTTCCTTCTCTCATTCACGCTCAGATTCCCTCATCTCCTGCAGCACCAAAGGCATGGGCGGCT-CCCCTGTAGCACACAGGTAAATTGCAATTACGTGATCTCACACTGCCCACTGAATCCGGCAAAGGCTTAAACTTAGAACCCACTTTTTCTGTCTTCATTGCCCGCTGCCATGTACGTCCCTCTAGGACACTTCATTTCAGCTTACAT s panTro4.chr6 170734900 846 + 172623881 CTAATACTCGTtgtga----tagtactgagtgccaacttgactggattgaaggacacaaagtattgtcctggctgtgtccatgagggtgttgccaaaggagattaccatttgagtcagtgggctgggaaaggcaggcccaccctcaatgtgggtggccaccatctaatcagccgcctgcttggct-----aggataaaagcaggcagaggaacgtggaaggactggactggctgagtcttccacgttccatctttctcccgtgctggatgcttcctgcccttgaacatcagactccaagttcttcagcttttggactcttggaccttggactt-acactagtggtttgccaggggctctcgggccttcggccacagaccgaaggctgcactgtcggcttccctacttttgagg-tttgggactcggactggcttccttgctcctcagcttgcagatggtctactgtgggacttcaccttgtgattgtgtgagttaattctcctaataaactccctttcatgtatacatctatccta------ctagtcctctagagaaccctcactaatacaCTC-ACCTTGGCGAGTTATTGAGAGAATTAAGTCAAATAACAGAATCAAAAGACTGACTCATGTCAGGAGCTGAAAGATCCAGTTCCTTCTCTCATTCACGCTCAGATTCCCTCATCTCCTGCAGCACCAAAGGCGTGGGCGGCT-CCCCTGTAGCACACAGGTAAATTGCAATTACATGATCTCACACTGCCCACTGAATCCGGCAAAGGCTTAAACTTAGAACCCACTTTTTCTGTCTTCACTGCCCCCTGCCATGTACGTCCCTCTAGGACACTTCATTTCAGCTTACAT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172488838 851 + 174210431 CTGATACTCGTtgtgatagttagtactgagtgccaacttgactggattgaaggacacaaagtattgtcctggctgtgtccatgagggtgttgccagaggagattaccatttgagtcagtgggctgggagaggcagacccaccctcagtctgggtggccaccatctaatcagctgccggcttggct-----aggataaaagcaggcagaggaacgtggaaggactggactggctgagtcttcctgcctccatctttctcccatgctggatgcttcccaccctcgaacatcagactccaggctcttcagcttttggactcttggaacttggactt-acactagtggtttgccaggggctctcgggccttcggccacagactgaaggctgcactgtcagcttccctacttttgagg-tttgggactcggactggctcccttgcccctcagcttgcagacgggctattgtgggacttcaccttgtgattgtgtgagtcaattctcctaataaactccctttcatgtatacttctatccta------ctagtactctagagaaccctcactaatacaCTC-ACCTTGGCGAGTTATTGAGAGAATTAAGTCAAATAACAGAATCAAAAGACTGACTCATGTCAGGAGCTGAAAGATCCAGTTCCTTCTCTCATTCACGCTCAGATTCCCTCATCTCCTGCAGCACCAAAGGCGTGGGCGGCTCCCCCTGTAGCACACAGGTAAATTACAATTACAGGATCTCACACTGCCCACTGAATCTGGCAAAGGCTGAAACTTAAAACCCACTTTTTCTGTCTTCACTGCCCCCTGCCATATACATCCCTCTAGGACACTTCATTTCAGCTTACAT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156349198 848 + 157873769 CTAAAACTCGTtgtgatagttagtactgagtgccaacttgactggattgcaggacacagagtattgtcctggctgtgtccatgagggtgttgccaaaggagattaccatttgagtcagtgggctgggagaggcagacccaccctcagtctgggtggccaccatctaatcagctgccagcttggct-----aggataaaagcaggcagaggaacatggaaggactggactagctgagtctccctacctccatctttgtcccgtgctggatgcttcctgccctcggacctcagactccaagttcttcagcttttggactcttggaccttgcacttaacactagtggtttgccaggagctctcgggccttcagccacacactgaaggctacactgtcagcttccctacttttgagg-tttgggactcggactggctccgttgcttctcagcttgcagacggcctattgtgggacttcaccttgtgattgtgtgag----ttctgctaataaactccctttcatgtatacatctatccta------ctagtcctctagagaaccctcactaatataCTC-ACCTTGGCAAGTTATTGAGAGAGTTAAGTCAAATAACAGAATCAAAAGACTGACTCATGTCAGGAGCTGAGAGATCCAGTTCCTTCTCTGATTCATGCTCAGATTCCCTCATCTCCTGCAGCACCAAAGGCGTGGGCAGCTCTCCCTGTGGCACACAGGTAAATTACAATTACATGATCTCACACTGCCCACTGAATCTGGCAGAGGCTTAAACGTATAACCCACTTTTTCTGTCTTCACTGCCCCCTGCCATGTACATCCCTCTAGGACACTTCATTTCAGCTTACAT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168164557 850 + 169853907 CTAATACTCATtgtgataattagtactgagtgccaacttgactggaatcaaggacacaaagtgttg-cctggctgtgtccgtgagggtgttgccagaggagattaatacttgagtcagtgggctgggagaggcagacccaccctcggtctgggtgggcaccatctaatcagctgctggattggct-----aggatgaaagcaggcagaggaacatggaaaga--ggactggctgagtcttcctgcctctatttttctcccatgctggctgcttcctgccctcaaacatcagactccaagttcttcagcttttggacccttggacctcggactt-acactagtggtttgccaggggctctcgggcctttggccacagaccaaaggctgcactgtcagcttccctacttttgaggttttgggacttggtttggctcccttgctcctcagcttgcagacggcctattatgggacttcaccttgtgatggtgtgagtgaattctcctaataaactccctttcatgtatacatctctccta------ctagtcctctagagaaccctgactaatgcaCTCAACCTTGGCGAGTTATCGAGAGAATTAAGTCAAATAACAGAATCAAAAGACTGACTCATGTCAGGAGCTGAGAAATCCAGTTCCTTCTCTCATTCATGCTCAGATTCCCTCATCTCCTGCAGCACCAAAGGCATGGCGGGCTCACCCTGTAGCACACAGGTAAATTACAATTACATGATCTTATGCTGCCCACTGAATCTGGCAAAGGCTTAAACTTATACCCCACTTTTTCTGTCTTCACTGCCCCCTCCCATGTATATCCCTCTATGACACTTCATTTCTGCTTACAT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169119205 850 - 170955103 CTAATACTCATtgtgataattagtactgagtgccaacttgactggattgaaggacacaaagtgttg-cctggctgtgtccgtgagggtgttgccagaggagattaatacttgagtcagtgggctgggagaggcagacccaccctcagtctgggtggccaccatctaatcagctgctggcttggct-----aggataaaagcaggcagaggaacatggaaaga--ggactggctgagtcttcctgcctctatttttctcccatgctggctgcttcctgccctcaaacatcagactccaagttcttcagcttttggacccttggacctcggactt-acaccagtggtttgccaggggctctcgggcctttggccacagacgaaaggctgcactgtcagcttccctacttttgaggttttgggacttggtttggctcccttgctcctcagtttgcagacggcctattatgggacttcaccttgtgatggtgtgagtgaattctcctaataaactccctttcatgtatacatctctccta------ctagtcctctagagaaccctgactaatgcaCTCAACCTTGGCGAGTTATCGAGAGAATTAAGTCAAATAACAGAATCAAAAGACTGACTCATGTCAGGAGCTGAGAAATCCAGTTCCTTCTCTCATTCATGCTCAGATTCCCTCATCTCCTGCAGCACCAAAGGCATGGCGGGCTCACCCTGTAGCACACAGGTAAATTACAATTACATGATCTTATGCTGCCCACTGAATCTGGCAAAGGCTTAAACTTATACCCCACTTTTTCTGTCTTCACTGCCCCCTCCCATGTATATCCCTCTATGACACTTCATTTCTGCTTACAT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163937247 851 + 165299245 CTAATACTCATTGTGATAATTAGTACTGAGTgccaacttgactggattgaaggacaCAAAGTGTTGTCCTGGCTGTGTCCGTgcgggtgttgccagaggagattaatatttgagtcagtgggctgggagaggcagacccaccctcagtctgggtgggcaccagcTAATCAGCTACTGGCttggct-----aggataaaagcaggcagaggaacatggaaaga--ggactggctgagtcttcctgCCTCtatttttctcccatgctggatgcttcctgccctcaaacatcagattccaagttcttcagcttttggacccTTGGACCTCGGACTT-ACACTAGTGGTGTGCCAGGGGCTCTCcagcctttggccacagactgaaggctgcactgtcagcttccctacttttgaggttttgggacttggttCGGCtcccttgctcctcagcttgcagatggcctattgtgggacttcaccttgtgatggtgtgagtgaattctcctaataaactccctttcatgtaTACATCTCTCCTA------CTagtcctctagagaaccctgactaatgcactCAACCTTGGCGAGTTATCGAGAGAATTAAGTCAAATAACAGAATCAAAAGACTGACTCATGTCAGGAGCTGAGAGATCCAGTTCCTTCTCTCATTCATGCTCAGATTCCCTCATCTCCTGCAGCACCAAAGGCATGGCGGGCTCACCCTGTAGCACACAGGTAAATTACAATTACATAATCTCATGCTGCCCACTGAATCTGGCAAAGGCTTAAACTTATACCCCACTTTTTCTGTCTTCACTGCCCCCTCCCATGTATATCCCTCTATGACACTTCATTTCCGCTTACAT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96723002 842 + 98384682 CTAATACTCATtgtgataattagtactgagtgccaactagactggattggaggacacaaagtgttgtcctggctgtgtctgtgagggtgttgccagaagagattaatacttgagtcagtgggctgggagag---------ctctcagtctgggtgggcaccagctaatcagctgctggcttggct-----aggataaaagcaggcagaggaacatggaaaga--cgactggctgagtcttcctgcctccatttttctcccatgctggctgcttcctgccctcaaacatcagactccaagttcttcagtttttggacccttggacctcggactt-acactagtggtttgccaggggctctccggcctttggccacagactgaaggctgcactgtcagcttccctgcttttgaggttttgggacttggttcggttcccttgctcctcagcttgcagacggcctattatgggacttcaccttgtgatggtgtgagtcaattctcctaataaactccctttcatgtatacatctctccta------ctagtcctctagagaaccctgactaatgcaCTCAACCTTGGCGAGTTATCGAGAGAATTAAGTCAAAGAACAGAATCAAAAGACTGACTCAAGTCAGGAGCTGAGAGATCCAGTTCCTTCTCTCATTCATGCTCAGATTCCCTCATCTCCTGCAGCACCAAAGGCATGGCGGGCTCACCCTGTAGCACACAGGTAAATTACAATTACATGATCTCATGCTGCCCACTGAATCTGCCAAAGGCTTAAACTTATACCCCACTTTTTCTGTCTTCACTGCCCCGTCCCATGTATATCCCTCTATGACACTTCATTTCCGCTTACAT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169933389 842 + 171630274 GGACTACTCCTCttga-------tagtgagtgtcaacttggctggattgaaggatacactgtatcgacctgg-tgtgtctgtcagggggttgctggaggagattcacatttgagtcagtgggctgggaaaggcaggcccacccgcagtctaggtgggcaccatctaatcagctgccagcacgactggcagaggat-aaagctggcagaggaacgtggaaggacgggactggccgagtctcccggcctccatctttcttccgtgctggatgct--ctgcacccgaacaccagactccaggttcttcggcttctggcctctgggacct-----tt-ac---catggcttgccaggggctctcgggccttcggcggcagactgcaggctgcactgtcggcttccccacctgtggggtttggggactgggtctggcttccttgctcctcagctcgcagacagcctgctgtggggcttccccttgtgatggtgtgagtcagtgctcctaataaactccc-tccacatattcatctatcctgtgggtcctgtccctctagagaactctgactcatacaCTC-GCCTTGGGAAGTTATTGAGAGAATTAAGTCAAATAACAGAATCGAAAGACCGACTCATGTCAGGAACTGGGAGATCCAGTTGCTTCTCTCCTTCATGCTTCGGTT-CCTTGTCTCCTGCAGCACCAAAGGCATCGCAGGCTCACCCTGTAGCACTCAGGTAAACCACAGTCCCACCGTCTCACACTGCCTGCTGGATATGTCACAGGCTTAAAGTTATCACCCACTTTTTCTGTCTTCACTGCCCTCTCCCGTGTGGATCCCTCTATGATACTTCGTTGCAGCTTAGAT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56208380 313 + 122678785 I a score=1619068.000000 s hg38.chr6_KB021644v2_alt 146955 539 + 185823 CCTGAAACTCTCAG-CTAGCAATTCTCTTCCCTGCCTCAG-TTCTCCATTGTGATCAGCATGCCCTGGGCCTCCCCCAGGTTCCCTTCCTTCCCATCATTGGGTGCGTTCCTGCTTAGCGCCTTATCCCAG-CTGCTCCTC--ACACCCTCA--CCTTTTTCCAGATA-GATCTTCCTCTTCTGCACAGGCTCCTCCCGGCTTCTCATCTGTTCTGAAAGCCAGCACGATTCCACGATCCTCAGATCACATTGCACACC-GAAGACCCCA-GTGATCACCTACTGCCTGGAATCTTCGCCTTGCACCCCCACCCTCCTGTTCCTGCCTATCCAACATGG--ATTTCCTTACAGCACTGGCCTAGAACAAA-ATCAACCTGCAACTTTC-----TTCCATTTCTTCTGACTCAATGAAAA--------CATGGATGCAGCTCTGTCTTCATCCAGGACAG-GCCCCTCCTGCACTTGAATGACT---TTGTGTACTTCTCAATGTCCTGTCCTGTTGAGTTTGCTTCGATTTCTATTTGTCTAATGAAATCAGTTCAACATTTTTGGAAA s panTro4.chr6 170735746 541 + 172623881 CCTGAAACTCTC-----AGCAATTCTCTTCCCTGCCTCAGTTTCTCCATTGTGATCAGCATGCCCTGGGCCTCCCCCAGGTTCCCTTCCTTCCCATCATTGGGTGCGTTCCTGCTTAGCGCCTTATCCCAG-CTGCTCCTC--ACACCCTCA--CCTTTTTCCAGATA-GATCTTCCTCTTCTGCACAGGCTCCTCCTGACTACTTATCTGTTCTGAAAGCCAGCACGATTCCACGATCCTCAGATCACATTGCACACC-GAAGACCCCA-AAGGTCACCTACTGCCTGGAATATTCGCCTTGCACCCCCACCCTCCTGTTCCTGCCTATCCAACATGG--ATTTCCTTACAGCACAGGCCTAGAACAAA-ATCAACCTGCAACTTTCAGTAATTCCATTTCTTCTGACTCAGTGAAAA--------CATGGATGCAGCTCTGTCTTCATCCAGGACAG-GCCCCTCCTGCACTTGAATGACT---TTGTGTACTTCTCAATGTCCTGTCCCGTTGAGTTTGCTTCGATTTCTATTTGTCTAATGAAATCAGTTCAACATTTTTGGAAA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172489689 542 + 174210431 CCTGAAACTCTCAG-CTAGCAAGTCTTTTCCTTGCCTCAGTTTCTCCATTGTGATCAGCATGCCCTGGGCCTCCCCCAGCTTCCCTTCCTTCCCATCATTGGGTGCATTTCTGCTTAGCGCCTTATCCCAG-CTGCTCCTC--ACACCTTCA---CTTTTTCCAGATA-GATCTTCCTCTTCTGCACAGGCTCCTCCCAGCTTCTCATCCGTTCTGAAAGCCAGCACGATTCCGTGATCCTCAGATCACATTGCACACC-GAAGACCCCA-ATGATCACCTACTGCCTGGAACATTCGCCTTGCACCTCCACCCTCCTGTTCCTGCCTATCCAACATGG--ATTTCCTTACAGCACTGGCCTAGAACAAA-ATCAACCTGCAACTTTCAGTAATTCCATTTCTTCTGACTCAATGAAAA--------CATGGATGGGGCTCTGTCTTTATCCAGGACAG-GCCCCTCCTGTACTTGGATGAC-----TGCGTACTCCCCAATGTCCTGTCCCATTAAGTTTGCTTCGATTTCTATTTGTCTAATGAAATCAGTTTAACATTTTTGGAAA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156350046 543 + 157873769 CCTGAAACTCTCAG-CTAGCAATTATCTTCCTCATCTCAGTTTCTCCATTGCGATCAGCATGGCCTGGGCCTCCCCCAGGTTCCCTTCCTTCCCATCATTGGGTGCATTCCTGCTTAGCGCCTTATCCCAG-CTGCTCCTC--ACACCCTCA--CCTTTTTCCAGATA-GATCTTCCTCTTCGGCACAGGCTCCTCTCGGCTTCTCATCTGTTCTGAAAGGCAGGACGATTCCACAATCCTCAGGTCACATTGCACACC-GACGACCCCA-ATGCTCGCCTACTGCCTGGAACATTCACCTTGCACCCCCACCCTCCTGTTCCTGCCTATCCAACGTGG--ATTTCCTTACAGCACTGGCCTAGAACAAA-ATCGACCTGCAACTTTCAGTAATTCCATTTCTTCTGACTCAATGAAAA--------CATGGATGGGG--CTGTCTTCATCCAGGACAG-GCCCCTCCTGCACTTGGATGACT---TTGCATACTTCCCAATATCCTGTCCCGTTGAGTTTGCTTCGATTTCTATTTGTCTAATGAAATCAGTTTAACATTTTTGGAAA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168165407 544 + 169853907 CCTGAAACTCTCAG-CTAGCAATTGTCTTCCTTGCCTCAGTTTCTCCCTTGTGACCAGCATGCCCTGAGCCTCCTCCAGGTTCCCTTCCTTCCCATTATTGGGTGCGCTCCTGCTTAGCGCCTTATCCCAG-CTGCTCCTC--ACACCCTCG--CCTTCTTCCAGATA-GATCTTCCTCCTCTGCACAGA-TCCTCCCGGCTTCTCATCTGTTCTGAAAGTCAGCACGATTCCACGATCCTCAAATCACATTGCACACC-AAGGACCCCG-ATGCTCACCTATTGCCTGGAACATTCACCTTGCCCCACCACCCTCTCGTTCCTGCCTATCCAGCGTGG--ATTTCCTTACAGCACTGGCCTAGAACAAA-ATCAACCTGCAACTTTCAGTAATTCCATTTCTTCTGACTCAATGAAAA--------CATGGATGGGGCTCTGTCTTCCCCCAGGACAG-GCCCCTCCTGCACTTGGATGGCT---TTGCGCACTTCCCAATGTCCTGTCACGTTGAGTTTGCTTCAACTTCTATTTGTTCAATGAAATCAGTTTAACATTTTCGGAAA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169120055 544 - 170955103 CCTGAAACTCTCAG-CTAGCAATTGTCTTCCTTGCCTCAGTTTCTCCCTTGTGACCAGCATGCCCTGAGCCTCCTCCAGGTTCCCTTCCTTCCCATTATTGGGTGCGCTCCTGCTTAGCGCCTTATCCCAG-CTGCTCCTC--ACACCCTCG--CCTTCTTCCAGATA-GATCTTCCTCCTCTGCACAGA-TCCTCCCGGCTTCTCATCTGTTCTGAAAGTCAGCACGATTCCACGATCCTCAAATCACATTGCACACC-AAGGACCCCG-ATGCTCACCTATTGCCTGGAACATTCACCTTGCCCCACCACCCTCTTGTTCCTGCCTATCCAGCGTGG--ATTTCCTTACAGCACTGGCCTAGAACAAA-ATCAACCTGCAACTTTCAGTAATTCCATTTCTTCTGACTCAATGATAA--------CATGGATGGGGCTCTGTCTTCCCCCAGGACAG-GTCCCTCCTGCACTTGGATGGCT---TTGCGCACTTCCCAATGTCCTGTCACGTTGAGTTTGCTTCAACTTCTATTTGTTCAATGAAATCAGTTTAACATTTTCGGAAA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163938098 544 + 165299245 CCTGAAACTCTCAG-CTAGCAATT-TTttccttgcctcagtttctccattgtgACCAGCATGCCCTGAGCCTCCTCCAGGTTCCCTTCCTTCCCATTATCGGGTGCGCTCCTGCTTAGCGCCTTATCCCAG-CTGCTCCTC--ACACCCTCA--CCTTTTTCCAGATA-GATCTCCCTCTTCTGCACAGACTCCTCCCGGCTTCTCATCTGTTCTGAAAGTCAGCACGATTCCACGATCCTCAAATCACATTGCACACC-AAGGACCCCG-ATGCTCACCTATTGCCTGGAGCATTCACCTTGCCCCACCACCCTCTTGTTCCTGCCTATCCAGCGTGG--ATTTCCTTACAGCACTGGCCTAGAACAAA-ATCAACCTGCAACTTTCAGTAATTCCATTTCTTCTGACTCAGTGAAAA--------CATGGATGGGGCTCTGTCTTCCCCCAGGACTG-GCCCCTCCTGCACTTGGATGACT---TTGTGCACTTCCCAATGTCCTGTCACGTTGAGTTTGCTTCAACTTCTATTTGTTCAATGAAATCAGTTTAACATTTTCGGAAA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96723844 545 + 98384682 CCTGAAACTCTCAG-CTAGCAATTCTTTTCCTTGCCTCAGTTTCTCCATTGTGACCAGCATGCCCTGGGCCTCCTCCAGGTTCCCTTCCTTCCCATTATTGGGTGCGCTCCTGCTTAGCGCCTTATCCCAG-CTGCTCCTC--ACACCCTCC--CCTTTTTCCAGGCA-GATCTTCCTCTTCTGCACAGACTCCTCCTGGCTTCTCATCTGTTCTGAAAGTCAGCACGATTCCACGATCCTCAAATCACATTGCACACC-AAGGACCCCA-ATGCTCACCTATTGCCTGGAACATTCACCTTGCCCCACCACCCTCTTGTTCCTGCCTATCCAGCGTGG--ATTTCCTTACAGCACTGGCCTAGAACAAA-ATCAACCTGCAACTTTCAGTAATTCCATGTCTTCTGACCCAATGAAAA--------CATGGATGGGGCTCTGTCTTTACCCAGGACAG-GCCCCTCCTGCACTTGGATGACT---TTGCACACTTCCCAATGTCCTGTCACGTTGAGTTTGCTTCAACTTCTATTTGTTCAATGAAATCAGTTTAACATTTTCGGAAA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169934231 541 + 171630274 -CTGAAACTCCCAG-CTACCAAGACTCTTCCTTGCCTCAGTTTCTCCGCTGTGACCGGCATGGCCTGGGCCTCCCTCAGGCTCCCCTCCTT-CCATCATCAGGTGCGCTCCAGCCTAGCACCTTATCCCAG-CTGCTCCTC--ACACCCTCA--CCTTTCTCGTGCTG-GATCTTCCTCTTCTGCACAGACTCCTC-TGGCTTCTCATCTGTTCTGAAAGGCAGTGAGATCTCACGACCCTCAGGTCACATAGCACATC-GAAGACCCCA-ATGCTCCTCTGCTGCCTGGAACATTCACCTTCCACAAACGCCGTCCCATTCCTGGCTAT-CAACATGT--ATTTCCTTACAGCAATGGCCTAGAACAAA-ATCAGCCTGCAGCTTTCGGTGATTCAGCTTCTCCTGACTCAATGAAAA--------CATGGATGGGACTCTGTCTTCCAACAGGACAG-ACCCCTCATGCATCTGGACGACT---TTGCGCTCCTCCCAACGTCCTGACCTACTGAGTTTGCCTCTACCTCTATTTGTCTAATGAAATCAGTTTAACGTTTCTGGAAG i calJac3.chr4 C 0 C 0 s canFam3.chr1 56208693 555 + 122678785 CCTAAAACTCCCTGTCCAGTGAGCCCTTTGCTTGCCTTGGTTTCTCCACAGTGATCCGCACACTCTGGGCCTCTCCCA--TATCTGTCCTTTCTGTCACC-GATGGGTTCCTGGGCAGTGGATCTCTGCAGTCTGCTTCCTGAACATCCTTGGGCCTCCTCTCTGCTCTGATCTTGCTCTTCC---TGGATGTCTC----TGTTTCATCTCTTCCTAAATCCAGTGGGATCCTAAAATCCCTAGACTGGGCTACACAGCGGAAGACGCCAGACGCTCACCAGCTGGGTTGAAAATCTGTTCCTCCCCCTACCTCCCCCATTTCTACTCATCCAATCTGTTCCTCTCCTTCCAGCACTTGCCTGGAACAAAGGTAAGCCTGGGCTTGACAATCATTT-GCTTCCTCTGACTCCAGACAGAGGGCATGCCATTGGGTGACCCCCACCTTTACCTGGGACGGAGTTCACCCAGAACCCGA--GGCTCGCTTACTTCCTTACCAACATCC-ATCCCACTGGGACGGCCTCCGTTTCCACATGTCCGATGGCATCCGTTCAGAGTTCTCAGGGA i canFam3.chr1 I 313 I 4044 a score=113596.000000 s hg38.chr6_KB021644v2_alt 147494 40 + 185823 GGATTCCTACATTCCACACATA-GTGCTGAGGGTAGGATCT s panTro4.chr6 170736287 40 + 172623881 GCATTCCTACATTCCACACACA-GTGCTGAGGGTAGGATCT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172490231 40 + 174210431 GCATTCCTACATTCCACACACA-GTGCTGAGGGTAGGATCT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156350589 40 + 157873769 GCATTCCTACATTCCACACACA-GTGCTGAGGTTAGGATCT i nomLeu3.chr3 C 0 I 145 s rheMac3.chr4 168165951 40 + 169853907 ACATTCCTACATTCCACACCCA-GTGCTGAGGGTAGGATCT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169120599 40 - 170955103 ACATTCCTACATTCCACACCCA-GTGCTGAGGGTAGGATCT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163938642 40 + 165299245 ACATTCCTACATTCCACACCCA-GTGCTGAGGGTAGGATCT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96724389 40 + 98384682 ACATTCCTACATTCCACACCCA-GTGCTGAGGGTAGGATCT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169934772 37 + 171630274 ACATTCCTA----CCACACACATGTGCTGAAGGCAGGATCT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56209248 4044 + 122678785 I a score=78958.000000 s hg38.chr6_KB021644v2_alt 147534 25 + 185823 CTGCTGAAAGCCACACCTGCTCAGG s panTro4.chr6 170736327 25 + 172623881 CTGCTGAAAGCCACACCTGCTCAGG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172490271 25 + 174210431 CTGCTGAAAGCCACATCTGCTCAGG i ponAbe2.chr6 C 0 I 2 s nomLeu3.chr3 156350774 25 + 157873769 CTGCTGAAAGCCGCACCTGCTCAGG i nomLeu3.chr3 I 145 C 0 s rheMac3.chr4 168165991 25 + 169853907 CTGCTGAAAGCCACACCTGCTCAGG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169120639 25 - 170955103 CTGCTGAAAGCCACACCTGCTCAGG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163938682 25 + 165299245 CTGCTGAAAGCCACACTTGCTCAAG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96724429 25 + 98384682 CTGCTGAAAGCCACACCTGCTCAGG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169934809 25 + 171630274 CTGCTGAAAGCCACACCTGCCCACA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56209248 4044 + 122678785 I a score=-3077.000000 s hg38.chr6_KB021644v2_alt 147559 3 + 185823 -CCT s panTro4.chr6 170736352 3 + 172623881 -CCC i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156350799 3 + 157873769 -CCC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168166016 2 + 169853907 -TC- i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169120664 2 - 170955103 -TC- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163938707 2 + 165299245 -TC- i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96724454 2 + 98384682 -TC- i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169934834 3 + 171630274 ATC- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56209248 4044 + 122678785 I e ponAbe2.chr6 172490296 2 + 174210431 I a score=84081.000000 s hg38.chr6_KB021644v2_alt 147562 27 + 185823 ACCTGCTGAAAGCCACACCTGCTCAGG s panTro4.chr6 170736355 27 + 172623881 ACCTGCTGAAAGCCACACCTGCTCAGG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172490298 27 + 174210431 ACCTGCTGAAAGCCATACCTGCTCAGG i ponAbe2.chr6 I 2 T 29 s nomLeu3.chr3 156350802 27 + 157873769 ACCTGCCGAAAGCCGCACCTGCTCAGG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168166018 27 + 169853907 ACCTGCTGAAAGTCACACCTGCTCAGG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169120666 27 - 170955103 ACCTGCTGAAAGCCACACCTGCTCAAG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163938709 27 + 165299245 ACCTGCTGAAAGCCACATCGGCTCAGG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96724456 27 + 98384682 ACCTGCTGAAAGCCACACCTGCTCAAG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169934837 27 + 171630274 ACCTGCTGAAAGCCACACCTGCCCAGG i calJac3.chr4 C 0 I 1 e canFam3.chr1 56209248 4044 + 122678785 I a score=194283.000000 s hg38.chr6_KB021644v2_alt 147589 65 + 185823 TCACCTGCTGAAAGCCGCACCTGCTCAGG-TCACCTGCTGAAAGCCGCACCTGCTCAGG-TCACCTG s panTro4.chr6 170736382 65 + 172623881 TCACCTGCTGACAGCCGCACCTGCTCAGG-TCACCTGCTGAAAGCCGCACCTGCTCAGG-TCACCTG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172490296 65 + 174210431 TCACCTGCTGAAAGCCATACCTGCTCAGG-TCACCAGCTGAAAGCCGCACCTGCTCAGG-TCACCTG i ponAbe2.chr6 T 29 C 0 s nomLeu3.chr3 156350829 65 + 157873769 TCACCTGCCGAAAGCCGCACCTGCTCAGG-TCACCTGCCGAAAGCCGCACCTGCTCAGG-TCACCTG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168166045 65 + 169853907 TCACCTGCTGAAAGTCACACCTGCTCAGG-TCACCTGCTGAAAGTCACACCTGCTCAAG-TCACCTG i rheMac3.chr4 C 0 T 29 s macFas5.chr4 169120693 65 - 170955103 TCACCTGCTGAAAGCCACACCTGCTCAAG-TCACCTGCTGAAAGCCACACCTGCTCAGG-TCACCTG i macFas5.chr4 C 0 I 30 s papAnu2.chr4 163938736 65 + 165299245 TCACCCGCTGAAAGCCACACCTGCTCAAG-TCACCTGCTGAAAGTCACACCTGCTCAGG-TCACCTG i papAnu2.chr4 C 0 I 29 s chlSab2.chr13 96724483 65 + 98384682 TCACCTGCTGAAAGCCACACCTGTTCAGG-TCACCTGCTGAAAGCCACACCTGCTCAGG-TCCATTG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169934865 67 + 171630274 TCACCTGCTGAAAGCCACACCTGCCCAGGATCACCTGCTGAAAGCCACACCTGCTCAGGATCACCTG i calJac3.chr4 I 1 C 0 e canFam3.chr1 56209248 4044 + 122678785 I a score=83332.000000 s hg38.chr6_KB021644v2_alt 147654 29 + 185823 CTGACAGCCGCACCTGCTCAGG-TCACCTG s panTro4.chr6 170736447 29 + 172623881 CTGACAGTCACACCTGCTCAGG-TCACCTG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172490361 29 + 174210431 CTGAAAGCCGCACCTGCTCAGG-TCACCTG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156350894 29 + 157873769 CCGAAAGCCGCACCTGCTCAGG-TCACCTG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168166081 29 + 169853907 CTGAAAGTCACACCTGCTCAAG-TCACCTG i rheMac3.chr4 T 29 T 119 s macFas5.chr4 169120788 29 - 170955103 CTGAAAGCCACACCTGCTCAGG-TCACCTG i macFas5.chr4 I 30 C 0 s papAnu2.chr4 163938830 29 + 165299245 CTAAAAGCCACGCCTGCTCAGG-TCACCTG i papAnu2.chr4 I 29 C 0 s chlSab2.chr13 96724548 29 + 98384682 TTAAAAGCCACACCTGCTCAGG-TCACCTG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169934932 30 + 171630274 CTGAAAGCCACACCTGCCCAGGATCACCTG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56209248 4044 + 122678785 I a score=72725.000000 s hg38.chr6_KB021644v2_alt 147683 39 + 185823 CTGACAGCTGCACCTGCTCAGG-TCACCTGCTGAAAGCCG s panTro4.chr6 170736476 39 + 172623881 GTGAAAGCCGCACCTGCTCAGG-Tcacctgctgacagccg i panTro4.chr6 C 0 T 29 s ponAbe2.chr6 172490390 39 + 174210431 CTGAAAGCCGCACCTGCTCAGG-TCACCTGCTGAAAGCCG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156350923 40 + 157873769 CCAAAAGCTGCACCTGATCAGGCCCACCTGCTGAAAGCTG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169120817 40 - 170955103 CTGAAAGCCACACCTGCTCAGGCCCACCTGCTGAAAGTCA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163938859 39 + 165299245 CAGAAAGCCACACCTGCTCAGG-TCACCTGCTAAAAGCCA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96724577 39 + 98384682 CTGAAAGCCACACCTGCTCAGG-TCCATTGTTAAAAGCCA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169934962 40 + 171630274 CTGAAAGCCACACCTGCCCAGGATCACCTGTTGAAAGCCA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56209248 4044 + 122678785 I e rheMac3.chr4 168166110 119 + 169853907 T a score=33466.000000 s hg38.chr6_KB021644v2_alt 147722 16 + 185823 CACCTGTACAGG-T-CAC s panTro4.chr6 170736486 16 + 172623881 CACCTGCTCAGG-T-cac i panTro4.chr6 T 29 C 0 s ponAbe2.chr6 172490429 16 + 174210431 CACCTGCTCAGG-T-CAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156350963 16 + 157873769 CACCTGCTCAGG-T-CAC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169120857 16 - 170955103 CACCTGCTCAGG-T-CAC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163938898 17 + 165299245 CACCTGCTCAGG-TCCAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96724616 16 + 98384682 CACCTGCTCAGG-T-CAC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169935002 17 + 171630274 CACCTGTCCAGGAT-CAC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56209248 4044 + 122678785 I e rheMac3.chr4 168166110 119 + 169853907 T a score=98419.000000 s hg38.chr6_KB021644v2_alt 147738 34 + 185823 CTGCTGAAAGCCCCACCTGCTCAGG-TCACCTGCT s panTro4.chr6 170736502 34 + 172623881 ctgctgacagccgcacctgctcagg-tcacctgct i panTro4.chr6 C 0 T 29 s ponAbe2.chr6 172490445 34 + 174210431 CTGCTGAAAGCCGCACCTGCTCAGG-TCACCTGCT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156350979 35 + 157873769 CTGCTGAAAGCCGCACCTGCTCAGGCCCACCTGCT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168165991 34 + 169853907 CTGCTGAAAGCCACACCTGCTCAGG-TCACCTGCT i rheMac3.chr4 T 119 C 0 s macFas5.chr4 169120873 34 - 170955103 CTGCTGAAAGCCACACCTGCTCAGG-TCACCTGCT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163938915 34 + 165299245 CTGCTGAAAGCCACACCTGCTCAGG-TCACCTGCT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96724632 34 + 98384682 CTGCTGAAAGCCACACCTGCTCAGG-TCCATTGTT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169935019 35 + 171630274 CTGCTGAAAGCCACACCTGCCCAGGATCACCTGTT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56209248 4044 + 122678785 I a score=58891.000000 s hg38.chr6_KB021644v2_alt 147772 19 + 185823 GAAAGCCGCACCTGCTCAG s panTro4.chr6 170736507 19 + 172623881 gacagccgcacctgctcag i panTro4.chr6 T 29 C 0 s ponAbe2.chr6 172490479 19 + 174210431 GAAAGCCGCACCTGCTCAG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156351014 19 + 157873769 GAAAGCCGCACCTGCTCAG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168166025 19 + 169853907 GAAAGTCACACCTGCTCAG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169120907 19 - 170955103 GAAAGCCACACCTGCTCAG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163938949 19 + 165299245 AAAAGCCACACCTGCTCAG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96724666 19 + 98384682 AAAAGCCACACCTGCTCAG i chlSab2.chr13 C 0 T 55 s calJac3.chr4 169935054 19 + 171630274 GAAAGCCACACCTGCTCAG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56209248 4044 + 122678785 I a score=-158.000000 s hg38.chr6_KB021644v2_alt 147791 3 + 185823 GTC- s panTro4.chr6 170736526 3 + 172623881 gtc- i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172490498 3 + 174210431 GTC- i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156351033 3 + 157873769 GTC- i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168166044 2 + 169853907 G-T- i rheMac3.chr4 C 0 I 1 s macFas5.chr4 169120926 3 - 170955103 GCC- i macFas5.chr4 C 0 I 1 s papAnu2.chr4 163938968 3 + 165299245 GTC- i papAnu2.chr4 C 0 I 1 s calJac3.chr4 169935073 4 + 171630274 GTCC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56209248 4044 + 122678785 I e chlSab2.chr13 96724685 55 + 98384682 T a score=20876.000000 s hg38.chr6_KB021644v2_alt 147794 7 + 185823 ACCTGCT s panTro4.chr6 170736529 7 + 172623881 acctgct i panTro4.chr6 C 0 T 21 s ponAbe2.chr6 172490501 7 + 174210431 ACCTGCT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156351036 7 + 157873769 ACCTTCG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168166047 7 + 169853907 ACCTGCT i rheMac3.chr4 I 1 C 0 s macFas5.chr4 169120930 7 - 170955103 ACCTGCT i macFas5.chr4 I 1 C 0 s papAnu2.chr4 163938972 7 + 165299245 ACCTGCT i papAnu2.chr4 I 1 C 0 s chlSab2.chr13 96724630 7 + 98384682 ACCTGCT i chlSab2.chr13 T 55 C 0 s calJac3.chr4 169935077 7 + 171630274 ACCTGCT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56209248 4044 + 122678785 I a score=75898.000000 s hg38.chr6_KB021644v2_alt 147801 37 + 185823 GAAAGCCGCACCTGTACAGG-TCACCTGCTGAAAGCCC s ponAbe2.chr6 172490508 37 + 174210431 GAAAGCCGCACCTGCTCAGG-TCACCTGCTGAAAGCCG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156351043 38 + 157873769 GAAAGCCGCACCTGCTCAGGCCCACCTGCTGAAAGCCG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168166054 37 + 169853907 GAAAGTCACACCTGCTCAGG-TCACCTGCTGAAAGTCA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169120937 37 - 170955103 GAAAGCCACACCTGCTCAGG-TCACCTGCTGAAAGCCA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163938979 37 + 165299245 GAAAGCCACACCTGCTCAAG-TCACCTGCTGAAAGCCA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96724637 37 + 98384682 GAAAGCCACACCTGCTCAGG-TCCATTGTTAAAAGCCA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169935084 38 + 171630274 GAAAGCCACACCTGCCCAGTATCACCTGCTGAAAGCCA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56209248 4044 + 122678785 I e panTro4.chr6 170736536 21 + 172623881 T a score=3600.000000 s hg38.chr6_KB021644v2_alt 147838 1 + 185823 C s panTro4.chr6 170736515 1 + 172623881 c i panTro4.chr6 T 21 C 0 s ponAbe2.chr6 172490545 1 + 174210431 C i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156351081 1 + 157873769 C i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168166091 1 + 169853907 C i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169120974 1 - 170955103 C i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163939016 1 + 165299245 C i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96724674 1 + 98384682 C i chlSab2.chr13 C 0 I 10 s calJac3.chr4 169935122 1 + 171630274 C i calJac3.chr4 C 0 C 0 e canFam3.chr1 56209248 4044 + 122678785 I a score=28692.000000 s hg38.chr6_KB021644v2_alt 147839 12 + 185823 ACCTGCTCAGGT s panTro4.chr6 170736516 12 + 172623881 acctgctcaggt i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172490546 12 + 174210431 ACCTGCTCAGGT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156351082 12 + 157873769 ACCTGCTCAGGT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168166092 12 + 169853907 ACCTGCTCAAGT i rheMac3.chr4 C 0 I 215 s macFas5.chr4 169120975 12 - 170955103 ACCTGCTCAGGT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163939017 12 + 165299245 ACCTGCTCAGAC i papAnu2.chr4 C 0 I 1 s chlSab2.chr13 96724685 6 + 98384682 ACCCGC------ i chlSab2.chr13 I 10 C 0 s calJac3.chr4 169935123 12 + 171630274 ACCTGCTCAGGT i calJac3.chr4 C 0 I 1 e canFam3.chr1 56209248 4044 + 122678785 I a score=14304.000000 s hg38.chr6_KB021644v2_alt 147851 5 + 185823 CACct s panTro4.chr6 170736528 5 + 172623881 cacct i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172490558 5 + 174210431 CACCT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156351094 5 + 157873769 CACCT i nomLeu3.chr3 C 0 M 509 s rheMac3.chr4 168166319 5 + 169853907 CACct i rheMac3.chr4 I 215 C 0 s macFas5.chr4 169120987 5 - 170955103 CACCT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163939030 5 + 165299245 CACCT i papAnu2.chr4 I 1 C 0 s chlSab2.chr13 96724691 2 + 98384682 ---CT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169935136 5 + 171630274 CACCT i calJac3.chr4 I 1 C 0 e canFam3.chr1 56209248 4044 + 122678785 I a score=4724.000000 s hg38.chr6_KB021644v2_alt 147856 3 + 185823 gct s panTro4.chr6 170736533 3 + 172623881 gct i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172490563 3 + 174210431 GCT i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168166324 3 + 169853907 gca i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169120992 3 - 170955103 GCA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163939035 3 + 165299245 GCA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96724693 3 + 98384682 GCA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169935141 3 + 171630274 GCT i calJac3.chr4 C 0 I 239 e canFam3.chr1 56209248 4044 + 122678785 I e nomLeu3.chr3 156351099 509 + 157873769 M a score=62771.000000 s hg38.chr6_KB021644v2_alt 147859 29 + 185823 tcctgtgctgcaggaagacagagggggct s panTro4.chr6 170736536 29 + 172623881 tcctgtgctgcaggaagacagagggggct i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172490566 29 + 174210431 TCCTGTGCTGCAGGAAGACAGAGGGGGCT i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168166327 29 + 169853907 ccctgtgctgcaggaagacagagggggcg i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169120995 29 - 170955103 CCCTGTGCTGCAGGAAGACAGAGGGGGCG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163939038 29 + 165299245 CCCTGTGCTGCAGGAAGACAGAGGGGGCT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96724696 29 + 98384682 TCCTGTGCTGCAGGAAGACAGAGGGGGCT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169935383 23 + 171630274 TTCTGT------GGAAGACAGGTGGGGCT i calJac3.chr4 I 239 C 0 e canFam3.chr1 56209248 4044 + 122678785 I e nomLeu3.chr3 156351099 509 + 157873769 M a score=1692438.000000 s hg38.chr6_KB021644v2_alt 147888 611 + 185823 tctactttcatccg-ccttccacatgccatgcagtgcatctcattcatgggttcttattgccatccacaatctgccggcaaggaaatttggaaagtctccccaggtttacatctgtgtgatctaaggggaagcACGAGTCCTGCCGGAGAACTGAGCCCCAGCTCCCTAAGCCACTTGTGTCTTTCCACTCCCTACCCCAGTTGGTGCAGGGTTGTGTTTGTCAGTTGTGGAATGGGTGTCCTGGGAGGCACAGTGT--TGTTTTAGTGCTG--AGGGGACTGCCCCCTCTTTCACTAGCAAATGTTTaggcaacatcgtaagcgtttctcatgcaacagcccattaatgttcacatgaacctgattatgtaatgacttagtgacaaggattttctattacaaacaggaagagggggcttcagaggtgaaggccctgcctgagagcacaggactgctaagtctgggcagatggaagcaggatgagcccaCGGGACCTTTGCATCTAACCACTGCACGAAGCCCGGCCCTCCAAGAGTGGTGACTTGGGGAGACACCCCAGTGTGGTAGACCCCATGACAGAACCAGAGGAGAGTGGGAAACACCATGTTTGCCAGC s panTro4.chr6 170736565 611 + 172623881 tctactttcacccggccttccacatgccatgcagtgcatctcattcatgggttcttactgccatccacaatctgccggcaaggaaatttggaaagtctccccaggtttacatctgtgtgatctaaggggaagcACCAGTACTGCCGGAGAACTGAGCCCCAGCTCCCTAAGCCACTTGTGTCTTTCCACTCCCTACCCCAGTTGGTGCAGGGTCGTGTTTGTCAGTTGTGGAATGGGTGTCCTGGGAGGCACGGTGT--TGTTTTAGTGCTG--AGGG-ACTGCCCCCTCTTTCACTAGCAGATGTTTaggcaacatcgtaagcgtttctcatgcaacagcccattaatgctcacatgaacctgattatgtaatgacttagtgacaaggattttctattacaaacaggaagagggggctccagaggtgaaggccctgcctgagagcacaggactgctaagtctgggcagatggacgcaggatgagcccaCGGGACCTTTGCATCTAACCACTGCACGAAGCCCTGCCCTCCAAGAGTGGTGACTTGGGGAGACACCCCAGTGTGGTAGACCCCATGACAGAACCAGAGGAGAGTGGGAAACACCATGTTTGCCAGC i panTro4.chr6 C 0 I 148 s ponAbe2.chr6 172490595 612 + 174210431 TCTACTTTCATCCGGCCTTCCACATGCTGTGCAATGCATCTCATTCATGGGTTCTTATTGCCATCCACAATCTGCCAGCAAGGAAATTTGGAAAGCCTCCCCAGGTTTACATCTGTGTGATCTAAGGGGAAGCACCAGTCCTGCCAGAGAACTGAGCCCCAGCTCCCTAAGCCACTTGTGTCTTTCCACTCCCTATCCCAGTTGGCGCAGGGGCGTGTTTGTCAGTTGTGGAATGGGTGTCCTGGGAGGCACAGTGT--TGTTTTAGTGCTG--ACGGGACTGCCCCCTCTTTCATTAGCAAATGTTTaggcaacatcgtaagcgtttctcatgcaacagcccattaatgctcacatgaacctgattatgtaatgacttagagacaaggattttctattacaaacaggaagagggggctccagaggtggaggccctgcttgagagcacaggactgctaagtctgggcagatggaagcaggatgagcccGCGGGACCCTTGCATCTAACCGCTGCATGAAGCCCTGCCCGCCAAGAGTGCTGACTTGGGGAGACACCCAAGTGTGGTAGACCCCATGACAGAACCAGAGGAGAGTGGGAAATGCCATGTTTGCCAGC i ponAbe2.chr6 C 0 I 222 s nomLeu3.chr3 156351612 611 + 157873769 TTTACTTTCATCCA-GCTTCCACGTGCCGTGCAGCGCATCTCATCCGTGGGTTCTTATTGCCATCCACAATCTGCCAGCAAGGACATTTGGAAAGTCTCCCCAGGTTTACATCTGTGTGATCTAAGGGGAAGCACCAGTCCTGCTGGAGAGCTGAGTCCCAGCTCCCTAAGCCACTTGTGTCTTTCCACTCCCTATCCCAGTTGGTGCAGAGGCATGTCTGTCAGTTGTGGAATGGGTGTCCTGGGAGGCACAGTGT--TGTTTTAGTGCTA--GGGGGACTGCCCCCTCTTTCATTAGCAAatgtttaggcaacatcgtaagcgtttctcttgcaacagcccattaatgctcacatgaacctgattatgtaatgacttagtgacaaggattttctattacaagcaggaagagggggctccagaggtgaaggccctgcctgagagcacaggactgctaagtctgggtggacggaagcaggatgagcccgcagggcccttgcatctaaccactGCACGAAGCCCTGTCCTCCAAGAGTGGTGACTTGGGGAGACACTCAAGTGTGGTAGACCCCATGAGAGAACCAGAGGAGAGTGGGAAACACCATGTTTGCCAAC i nomLeu3.chr3 M 509 C 0 s rheMac3.chr4 168166356 611 + 169853907 tctactttcatccggccttccacatgccatgcagtgcatctcacccataggttcttaatgccatccacaatctgctgacaaggaaatctggaaagtctccccaggtttacgtctgtgtgatccaaggggaagTGCTAGTCCTGCCAGAGAACTGAGCCCCAGCTCCCTAAGCC-CCTGTGTCTTTCCACTCCCTATCCCACGTTGTTCAGAAGCGTGTTTGTTAGTTGGGGAATGGGTGTCCTGGGAGGCACAGTGC--TGTTTTAATGCTG--AGGGGACTGTCCCCTCTTTCATTAGCAAATGTTTAAGCAACATTGtaaacatttttcatgcaataacccattaatgctcacataagcccgattatgtaatgaattagtgacaaagattttctattacaaacaggaagtgggggctccagaggtgaaggccctgcctgagagcacaggactgctaagtctgggcagatggaagcagggtcagcccgcgggacccttgcatctaaccactgcacaaagccctgccctccAAGAGTGGTGACTTGGGGAGACACCTGAGTGTGGTGGACCCCAGGGGAGATCCAGAGGAGAGTGGGAAACGCCATGTCTGCCAAC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169121024 611 - 170955103 TCCACTTTCATCCGGCCTTCCACATGCCATGCAGTGCATCTCACCCATAGGTTCTTAATGCCATCCACAATCTGCTGACAAGGAAATCTGGAAAGTCTCCCCAGGTTTACGTCTGTGTGATCCAAGGGGAAGTGCTAGTCCCGCCAGAGAACTGAGCCCCAGCTCCCTAAGCC-CCTGTGTCTTTCCACTCCCTATCCCACATTGTTCAGAAGCGTGTTTGTTAGTTGGGGAATGGGTGTCCTGGGAGGCACAGTGC--TGTTTTAATGCTG--AGGGGACTGCCCCCTCTTTCATTAGCAAatgtttaagcaacattgtaaacatttttcatgcaataacccattaatgctcacataagcccgattatgtaatgaattagtgacaaagattttctattacaaacaggaagtgggggctccagaggtgaaggccctgcctgagagcacaggactgctaagtctgggcagaTGGAAGCAGGGTCAGCCCACGGGACCCTTGCATCTAACCACTGCACAAAGCCCTGCCCTCCAAGAGTGGTGACTTGGGGAGACACCTGAGTGTGGTGGACCCCAGGGGAGATCCAGAGGAGAGTGGGAAACGCCATATCTGCCAAC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163939067 613 + 165299245 TCTACTCTCATCTGGCCTTCCACATGCCATGCAGTGCATCTCATCCATAGGTTCTTAATACCATCCACAATCTGCtgacaaggaaatttggaaaGTCTCCCCAGGTTTATATCTTTGTGATCCAAGGGGAAGTGCCAGTCCTGCCAGACAACTGAGCCCTAGCTCCCTAAGCC-CCTGTGTCTTTCCACTCCCTGTCCCAGGTGGTGCAGAGGCGTGTTTGTCAGTTGGGGAATGGGTGTCCTGGGAGGCACAGTGT--TGTTTTAGTACTGTAGGGGGACTGCCCTTTCTTTCATTAGCAAATGTTTAAGCAACATTGTAAACATTTTTCGTGCAATAACCCATTAATGCTCACATAAGCCCAATTATGTGATGAATTAGTGACAAAGATTTTCTATTACAAACAGGAAGTGGGGGCTCCAGAGGTGAAGGCCCTGCCTGAGAGCACAGGACTGCTAAGTCTGGGCAGATGGAAGCAGGCTCAGCCCGCGGGACCCTTGTATCTAACCACTGCACAAAGCCCTGCCCTCCAAGAGTGGTGACTTGGGGAGACACCTGAGTGTGGTGGACCCCAGGGGAGATCCAGAGGAGAGTGGGAAATGCCATGTCTGCCAAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96724725 610 + 98384682 TCTGCtc-catccagccttccacatgccatgcagtgcatctcatccatAGGTTCTTAATGCCATCCACAATCTGCTGACAAGGAAATCTGGAAAGTCTCCCCAGGTTTACGTCTGTGTGATCCAAGGGGAAGTGCCAGTCCTGCCAGAGAACTGAGCCCCAGCTCCCTAAGCC-CCTGTGTCTTTCCACTCCCTATCCCAGGTTGTTCAGAAGTGTGTTTGTCCGTTGGGGAATGGGTGTCCTGGGAGGCACAGTGG--TGTTTTAATGCTG--AGGGGACTGCCCCCTCTTTCATTAGCAAATGTTTAAGCAACATTGTAAACATTTTTCATGCAATAACCCATTAATGCTCACATAAGCCCGATTATGTAATGAGTTAGTGACAAAGATTTTCTATTACAAACAGGAAGTGGGGGCTCCAGAGGGGAAGGCCCTGCCTGAGAGCACAGGACTGCTAAGTCTGGGCAGATGGAAGCAGGCTCAGCCCGCAGGACCCTTGCATCTAACCACTGCACAAAGCCCTGCCCTCCAAGAGTGGTGACTTGGGGAGACATCTGAATGTGGTGGACCCCAGGGGAGATCCAGAGGAGAGTGGGAAATGCCATGTCTGCCAAC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169935406 589 + 171630274 CCTGTTTTCATCCAGCCTTTACAATGCCATGCAGCACAACTCATTCACAGGTTCTTAATGCCATACAGAATCTGCTGGCCAGGAAATCTGGAAAGTTTCCCCAGATTTACAGCTGTGTGATCCAAAGGGGC-TGCCAGTCCTGCCGGAGAACTGAGCCCCAGCGCCCTAAGGCACCCACGTCTTTCCACTCGTTCTCCCAGGTGGCACAGATGCATGTGTGTCAATTGTAGAATGGGTGTCCTGGGAGGCATGGTGTTCTGTTTTATTGCTG--GGGAGACTGCCCCCTCTTTCATTAGCAAATATTTaggcaacattataagaatttctcatgcaacatctcattaatgctcacgtgagcctggtgatgtaatgaattagtaacaagggttttctattacaaacaggaagcagaggctcTCGAGG-------------TGAGAGCACAGGACGGCCAAGTCTGGATGCAGAGGGCCAGGGTCAGCCTGCAGGACTCTTGCATCTGACCACTGCATGAATCCCTGCCCTCCAAGAGTGGTGACCTGGGGGGACACCCAAGTGTGCGACAGC-----------CCAGAGGAGAGTGGGGAACATGGTGTTCACCAAC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56209248 4044 + 122678785 I a score=416917.000000 s hg38.chr6_KB021644v2_alt 148499 157 + 185823 CATGAGGAGCCATCCAGAGAATAATGGCGGCTCCCCAGGACAGAGACGTGCACACTGGAGCCGCCGGGCACCGTGAGCTCTGCTTTCGAGAGTGCTTGACATCTGGTCGCAGGGTGATTGTATTTTCTGTTACTCTTTTTATTCAGTGTAAGGTTTT s panTro4.chr6 170737324 157 + 172623881 CATGAGGAACCATCCAGAGAATAATGGCGGCTCCCCAGGACAGAGACGTGCACACTGGAGCCGCCGGGCACCGTGAGCTCTGCTTTCGAGAGTGCTTGACATCTGGTCGCAGGATGATTGTATTTTCTGTTACTCTTTTTATTCAGTGTAAGGTTTT i panTro4.chr6 I 148 I 33 s ponAbe2.chr6 172491429 157 + 174210431 CATGAGGAACCATCCAGTGAATAACGGCGACTCCCCAGGACAGAGACGTGCACACAGGAGCCACCGGGCACCGTGAGCTCTGCTTTTGGGAGTGCTTGACATCTGGTCACAGGGTGATTGTATTTTCTGTTACTCTTTTTATTCAGTGTAAGGTTTT i ponAbe2.chr6 I 222 C 0 s nomLeu3.chr3 156352223 157 + 157873769 CAGGAGGAACCATCCAGTGAACAACGGCGGCTCCCCAGGACAGAGACGTGCACACAGGAGCCGCTGGGCACCGTGAGCTCTGCTGTCCTGAGTGCTTGACATCGGGTCACAGGGTGATTGTATTTTCTGTTACTCGATTTATTCAGTGTAAGGTTTT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168166967 157 + 169853907 CATGAGGAACCATCCAGTGACTACAGGCAGCTCCCCAGGACAGAGACGTGCGCACAGGAGCCGCCAGGCACCGTGAACTCTGCTTTCGTGAGTGCTTGGCATTTGGCCACAGGGTGATTGTAGTTTCTGTGCCTCTTTTTATTCAGCGTGAGGTTTT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169121635 157 - 170955103 CATGAGGAACCATCCAGTGACTACAGGCAGCTCCCCAGGACAGAGACGTGCGCACAGGAGCCGCCAGGCACCGTGAACTCTGCTTTCGTGAGTGCTTGACATCTGGCCACAGGGTGATTGTAGTTTCTGTGCCTCTTTTTATTCAGCGTGAGGTTTT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163939680 157 + 165299245 CACGAGGAACCATCCAGTGAATACAGGCAGCTCCCCAGGACAGAGATGTGCACACAGGAGCCGCCGGGCACCGTGAGCTCTGCTTTCGTGAGTGCTTGGCATCTGGCCACAGGGTGATTGTATTTTCTGTGACACTTTTTATTCAGCGTGAGGTTTT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96725335 157 + 98384682 CACGAGGAACCATCCAGTGAATACAGGCAGCTCCCCAGGACGGAGACGTGCGCACAGGAGCCGCCAGGCACCGTGAACTCTGCTTTCGTGAGTGCTTGGCATCTGGCCACAGGGTGATTGTATTTTCTGTGACTCTTTTTATTCAGCGTGAGGTTTT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169935995 149 + 171630274 CACGAGGACGCATTCAGTGAATAAGGGCAGCTCCCCAGGACAGAGACGGGCACAGGGGAGCTGC-AGGCGCAGTGAGGTCTGCCTTCACGGGTGCTTGACACCTGGTCCCAGGATGGTTCTAGTTTCGATTCCTC-ATTTATTCAGTGTAA------ i calJac3.chr4 C 0 C 0 e canFam3.chr1 56209248 4044 + 122678785 I a score=546903.000000 s hg38.chr6_KB021644v2_alt 148656 243 + 185823 CTTCTCCTTTTTATAGTCCTCTACTGAGTCCCTGGTTATCCTTGACTTAGAGCAATTCCATATCACATAGATCTCCAAATTCCCCAGACTAGAAAATGTGCTTTTGAACAAATTGTGTGGCTTTACTAGAGCATGATAATTGGCAAAAAGAAAACTTGGAAGACTCAGGGCCCAAAAGCCTGACAATCACAAATCAATCTCCATAGTTTTTGTCCACCCATTGTGGCAAAGGGAGAATCTGAA s ponAbe2.chr6 172491586 243 + 174210431 CTTCTCCTTTTTATAGTCCTCTACTGAGTCCCTGGTTATCCTTGACTTAGAGCAATTCCATATCACATAGATCTCCAAATTCCCCAGACTAGAAAATGTGCTTTTGAACAAATTGTGTGGCTTTACTAGAGCATGATAATTGGCAAAAAGAAAATTTGGAGGACTCGGGGCCCAAAGGCCTGACAATCACAAATCAATCTCCATAGTTTTTGTTCACCCACTGTGGCAAAGGGAGAATCTGAA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156352380 243 + 157873769 CTTCTCCTTTTTATAGTCCTCTACTGAGTCCCTGGTTATCCTTGACTTAGAGCAATTCCATATCACATAGATCTCCAAATTCCCCAGACTAGAAAATGTGCTTTTGAACAAATTGTGTGGTTTTACTAGAGCATGATAATTGGCAAAAAGAAAATTTGCAGGACTCAGGGCCCAAAAGCCTGACAATCACAAATCAATCTCCGTAGTTTTCGTCCACCCATTGTGGCACAGAGAAAATCTGAA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168167124 241 + 169853907 CTTCTCCTTTATAGAGTTCTCTACTGAGTCCCTGGTGATCCTTGGCTTAGAGCAACTCTATATCAC--AGATCTCCAAATTCCCCAGACTAGAAAATGCACTTTTGAACAAATTGTGTGGCTTTACTAGAGCATGATAGTTGGCAAAAAGAAAATTTGCAGGACTCGGGGCCCAACAGCCTGACAATCACAGATCAATCTCCGTAGTTTTTGTCCACCTGTTGTGGCAAAGGGAGAATCTGAA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169121792 241 - 170955103 CTTCTCCTTTATAGAGTTCTCTACTGAGTCCCTGGTGATCCTTGGCTTAGAGCAACTCTATATCAC--AGATCTCCAAATTCCCCAGACTAGAAAATGCACTTTTGAACAAATTGTGTGGCTTTACTAGAGCATGATAGTTGGCAAAAAGAAAATTTGCAGGACTCGGGGCCCAACAGCCTGACAATCACAGATCAATCTCCGTAGTTTTTGTCCACCTGTTGTGGCAAAGGGAGAATCTGAA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163939837 243 + 165299245 CTTCTCCTTTATAGAGTTCTCTACTGAGTCCCTGGTGATCCTTGGCTTAGAGCAACTCTATATCACATAGATCTCCAAATTCCCCAGACTAGAAAATGCACTTTTGAACAAATTGTGTGGCATTACTAGAGCATGATAGTTggcaaaaagaaaatttgcagGACTCGGGGCCCAACAGCCTGACAATCACAGATCAATCTCCGTAGTTTTTGTCCACCTGTTGTGGCAAAGAGAGAATCTGAA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96725492 243 + 98384682 CTTCTCCTTTATAGAGTTCTCTACTGAGTCCCTGTTGATCCTTGGCTTAGAGTGATTCTATATCACATAGATCTCCAAATTCCCCAGACTAGAAAATGCACTTTTGAACAAATTGTGTGGCATTACTAGAGCATGATAGTTAGCAAAAAGAAAATTTGCAGGACTCGGGGCCCAATAGCCTGACAATCACAGATCAATCTCTGTAGTTTTTGTCCACCTGTTGTGGCAAAGAGAGAATCTGAA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169936144 242 + 171630274 -CTCTCCTTTGTATCATCCTATACTGCACCCTTGATGATCCTTGGCTTAAAGCAATTCCATACCACATAGATCTCCACATTCCTCAGACTAGAAAAAGTGCTTTTGGACAAATTGTGTGGCTTTACTACAGCGTGATAATTGGCAAAAAGAAAATGTGCAAAACTTTGGGCCCCAAATCCTGACAATCACAAATAAATCTCTGTAGTTTTTGTCCACCCATGGTGGCAAAGGGAGAATCCGAA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56209248 4044 + 122678785 I e panTro4.chr6 170737481 33 + 172623881 I a score=2227489.000000 s hg38.chr6_KB021644v2_alt 148899 819 + 185823 CTGCGGTCTTGAAACCAGTGGCTGATGTGAAGCCCCTTGGGACGCAGTGGTGAGGGGCTCCTGCGTCAGAGTCATCTGGCTGCACTTCC-GGTGCTACATGACCTTAGGGGAGTCACCAGGACTCCCCAAAT--------------AACGCCAACACCTCCAGCACGGAAGAGGGGGTGTTGGTAGTGACTACAGCATGATGACTAGTGGCACCAAACACTTTGCCACGCGGAATGAGCAGGGCAGTCCGTGGACACCCACGTGGTGTGGTATGTTCTTGAATGAGCCCAGATCATTGGTCCCCCCC-----CATCCACAGAGCATTCACACATCAGATCTTCTTACACGATTCACCCACACTGGAACAGAGGAGGCTGCTGTATTATTTTTGCTTGAAAGTGATGATAGtgatggaagttgtgagaccttgggtctgg---tcttagtttaaaaggatttaagcaagagacacacagcaaaggagacgcagcgtgaagtaa-ttttttgcaaaggaaaaataatatttttacagttaggtgcagaataagacaggacagcttggga-------gagagaggattcagggtgggtgctctccaaggtgagacagcagagagcagcaggagggaggctccctctgtgggagtcttccacgattacccatgagggggtgggaggaggcgctgcttgg-ggcatgttctgggtgctcctctggatg--cacgcatggtagttgtccgtgcttgct--cacacgtcacatgtctcagggtcttgtatctccacccatggtttgctttttatgattataaagagcaaagggtcagtttgagga-cggtaaaatcaaagtgc s panTro4.chr6 170737514 816 + 172623881 CTGCGGTCTTGAAACCAGTGGCTGATGTGAAGCTCCT-GGGACGCAGTGGTGAGGGGCTCCTGCGTCAGAGTCATCTGGCTGCACTTCC-GGTGCTACATGACCTTAGGGGAGTCACCAGGACTCCCCAAAT--------------AACGCCAACACCTCCAGCACGGAGGAGGGGGTGTTGGTGGTGACTACAGCATGATGACTAGTGGCACCAAACACTTTGCCACGCGGAATGAGCAGGGCAGTCCGTGGACACCCACGTGGTGTGGTATGTTGTTGAATGAGCCCAGATCATCGGTCCCCCCC------ATCCACAGAGCATTCAGACATCAGATCTTCTTACACGATTCACCCACACTGGAACAGAGGAGGCTGCTGTATTACTTTTGCTTGAAAGTGATGAtggtgatggaggttgtgagaccttgggtctgg---tcttagttgaaaaggatttaagcaagagacacacagcaaaggagacgcagcatgaagtaa-ttttttgcaaaggaaaaataatattttgacagttaggtgcagaata-gacaggacagcttggga-------gagagaggattcagggcgggtgctctccaaggtaagacagcagagagcagcaggagggaggctccctctgtgggagtcttccacgattacccacgagggggtgggaggaggcgctgcttgg-ggcatgttctgggtgctcctctggatg--cacgcatggtagttgtccgtgcttgct--cacatgtcacatgtctcagggtcttgtatctccacccatggtttgctttttatgattataaagagcaaagggtcagtttgagga-cggtaaaatcaaagtgc i panTro4.chr6 I 33 C 0 s ponAbe2.chr6 172491829 829 + 174210431 CTGCGGTCTTGAAACCAATGGCTGATGTGAAGCCCCTTGGGGCGCAGTGGTGAGGGGCTCCTGCGTTAGAGTCACCTGGCTGCACTTCC-GGTGCTACATGACCTTAGGGGAGTCACCAGGACTCCCCAAATGCCAGAACTCCCCAAACGCCAATACCTCCAGCACCGAAG-GGGGGTGTTGATAGTGACTACAGCGTGGTGACTAGTGGCACCAAACACTTTGCCACGCAGAATGAGCAGGGCAGTCTGTGGACACCCACATGGTGTGGTATGTTCTTGAATGAGCCCAGATCATCGGTCCCCCCC------ATCCACAGAGCATTCAGACATCAGATCTTCTTACATGACTCACCCACACCAGAACGGAGGAGGCTGCTGTATTATTTTTGCTTGAAAGTGATGAtggtgatggaggttgtgagactttgggtctgg---tcttagtttaaaaggatttaagcaagaaacacacagcaaaggagatgcagcatgaagtaa-ttttttgcaaaggaaaaataatattttgaaagttgggtgcagaata-gacaggacagcttggga-------gagagaggattcagggcaggtgctctccaaggtgagacggcagagaccagcaggagggaggctgcctctgtgggagtcttccacgattacacatgagggggtgggagcaggcgctgcttgg-ggtatgttct-ggtgctcctctggatg--cacacatggtagttgtccatgcttgct--cacacgtcacatgtctcagggtcttgtatctccacccaagttttgctttttatgattataatgagcaaagggtcagtctgagga-aggtaaaatcaaagtgc i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156352623 833 + 157873769 CTGTGGTCTTGAAACCAGTGGCTGATGTGAAGCCCCTTGGGACGCAGTGGTGAGGAGCTCCTGCGTCAGAGTCACCTGGCTGCACTTCC-AGTGCCACATGACCTTAGGGGAGTCACCAGGACTCCCCAAATGCCAGGACTCCCCAAATGCCAACACCTCCAGCACCAAAGAGGGGGTGTTGGTAGTGACTACAGTGTGGTGACTAGTGGCATCAAACACTTTGTCACGCGGAATGAGCAGGGCAGTCCGTGGACACCCATGTGGTGTGGTATGTTCTTGAATGAGCCCAGATCATGGGTCCCCCC-------ATCCACAGAGCATTCAGACATCAGATCTTCTTACACGACTCACCCACGCCGGAACAGAGGAGGCTGCTGTATTATTTTTGCTTGAAAGTGATGAtggtgatggaggttgtgagaccttgggtctgg---tcttagtttaaaaggatttaagcaagagacacacagcaaaggagatgcagcatgaagtaatttttttgcaaaggaaaagtaatattttgaaagttaggtgcagaata-gacaggacagtttggga-------gagagaggattcagggcgggtgctctccaaggtgagacagcagagatcagcaggagggaggctccctctgtaggagtcttccacgattacccatgagggggtgggaggaggcgctgcttgg-ggcctgttctggatgctcctctggatg--cacgcatggtagttgtccatgcttgctcacacacgtcacatgtctcgggatcttgtatctccacccaaggtttgctttttatgattataatgagcaaagggccagtttgagga-tggtaaaatcaaagtgc i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168167365 819 + 169853907 CTGTGGTCTT-AAACCAGCGGCTGATGTGAAGCCCCTTGGGACCGAGTGGTGAGGAGCTCCTGTGCCAGAGTCATCCGACTGCATGTCT-GGTGCTGTGTGACCTTAGAGGAGGCATCAGCACTCCCCA-----------------AACACCAACACTTCCAGCACTGAAGAGGGGGTGTTGGCAGTGACTACAGCGTGGGGACTAGTGGCACCAAACCCTTTGCCACGCGGAATAAGCAGGGTGGTCCATGGACACCCACGTGGTGTGGTGTGTTCTTGAATGTGCCCAGATCATTTGTCCCCCGCTCCCCCATCCGCAGAGCATTCAGACATCAGACCTTCTTACACGACTCACCCACACCAGAACAGAGGGGGCTGCTGTATCATTTTTGCTTGAAAATGATGAtggtgatggaggttgtgagactttgggtctgg---tcttagtttaaaaggatttaagcaagagacacacagcaaaggagatgcagtgtgaagtaa-tttattgcaaaggaaaaataatattttggaagttaggtgcagaata-gacaggagaacttggga-------gagagaggattcagggcgggtcctctctggggtgagacagcagagaccagcaggtgggaggctccctctgtgggaatcttccagggttacccaggagggggtgggaagacatgctgcttgg-ggcatgttctggatggtcctctgggtg--cacgcatggtagctgtccatgcttgct--cacatgtcacgtgtctcagggtcttgtatctccacccaaggtttgcgttttatgagtataaagagcaaagggtcagtttgagga-cggtaaaatcaaagtgc i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169122033 819 - 170955103 CTGTGGTCTT-AAACCAGCGGCTGATGTGAAGCCCCTTGGGACCGAGTGGTGAGGAGCTCCTGTGCCAGAGTCATCCGACTGCATGTCT-GGTGCTGTGTGACCTTAGAGGAGTCATCAGCACTCCCCA-----------------AACACCAACACTTCCAGCACTGAAGAGGGGGTGTTGGCAGTGACTACAGCGTGGGGACTAGCGGCACCAAACACTTTGCCACGCGGAATAAGCAGGGTGGTCCATGGACACCCACGTGGTGTGGTGTGTTCTTGAATGTGCCCAGATCATTTGTCCCCCGCTCCCCCATCCGCAGAGCATTCAGACATCAGACCTTCTTACACGACTCACCCACACCAGAACAGAGGGGGCTGCTGTATCATTTTTGCTTGAAAATGATGAtggtgatggaggttgtgagactttgggtctgg---tcttagtttaaaaggatttaagcaagagacacacagcaaaggagatgcagtgtgaagtaa-tttattgcaaaggaaaaataatattttgaaagttaggtgcagaata-gacaggagaacttggga-------gagagaggattcagggcgggtcctctctggggtgagacagcagagaccagcaggtgggaggcaccctctgtgggaatcttccatggttacccaggagggggtgggaagacatgctgcttgg-ggcatgttctggatggtcctctgggtg--cacgcatggtagctgtccatgcttgct--cacatgtcacgtgtctcagggtcttgtatctccacccaaggtttgcgttttatgagtataaagagcaaagggtcagtttgagga-cggtaaaatcaaagtgc i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163940080 819 + 165299245 CTGTGGTCTT-AAACCAGCGGCTGATGTGAAGCCCCTTGGGACCCAGTGGTGAGGAGCTCCTGTGCCAGAGTCATCCAACTGCACGTCC-ggtgctgtgtgaccttagaggGGTCATCAGCACTCCCCA-----------------AACGCCAACACTTCCAGCACTGAAGAGGGGGTGTTGGTAGTGACTACAGCGTGGGGACTAGTGGCACCGAACGCTTTGCCACGCGGAATAACCAGGGCGGTCCATGGACACCCACGTGGAGTGGTGTGTGCTTGAATGAGCCCAGATCATTTGTCCCCCGCTCCCCCATCCGCAGAGCATTCAGACATCAGACCTTCTTACACGACTCACCCACACCGGGACAGAGGGGGCTGCTGTATCATTTTTGCTTGaaaatgatgatggtgatggaggtTGTGAGACTTTGGGTCTAG---TCTCAGTTTAAAAGGATTTAAGCAAGAGACACACAGCAAAGGAGATGCAGTGTGAAGTAA-TTtattgcaaaggaaaaataatattttgaaagttaagtGCAGAATA-GACAGGAGAACTTGGGA-------GAGAGAGGATTCAGGGTGGGTCCTCTCCAGGGTGAGACAGCAGAGACCAGCAGGAGGGAGGCTCCCTCTGTGGGAATCTTCCATGGTTACCCAGGAGGGGGTGGGAAGACACGCTGCTTGG-GGCATGTTCTGGATGGTCCTCTGGGTG--CACGCATGGTAGCTGTCCATGCTTGCT--CACATGTCACGTGTCTCAGGGTCTTGTATCTCCACCCAAGGTTTGCGTTTTATGAGTATAAAGAGCAAAGGGTCAGTTTGAGGA-TGGTAAAATCAAAGTGC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96725735 817 + 98384682 CTGTGGTCTTGAAACCAGCAGCTGATGTGAAGCCCCTTGGGACCCAGTGGTGAGGAGCTCCTGTGCCAGAGTCATCCGACTGCACCTCCGGGTGCTGTGTGACCTTAGAGGAGTCATCAGCACTCCCCA-----------------AACACCAACACTTCCAGCACTGAAGAGGGGGTGCTGGCAGTGACTACAGCGTGGGGACTAGTGGCACCAAACACTTTGCCACGGGGAATAAGCAGGGCGGTCCATGGACACCCATGTGGTGTGGTGTGTTCTTGAATGAGCCCAGATCATCTGTCCCCCGCTCCCCCATCCGCAGAGCATTCAGACATCAGACCTTCTTACACGACTCACCCACACCAGAACAGA-GGGGCTGCTGTATCATTTTTGCTTGAAAGTGATGAtggtgatggaggttgtgagactttgggtctgg---tcttagtttaaaaggatttaagcaagagacacacagcaaaggagatgcagtgtgaagtaa-tttattgcaaaggaaaaataatattttgaaagttaggtgcagaata-gacaggagaacttggga-------gagagaggattcagggtgggtcctctccggggtgagacagc--agaccagcaggagggaggctccctctgtgggaatcttccatggttacccagga-ggggtgggaagacacgctgcttgg-ggcatgttctggatggtcctctgggtg--cgtgcatggtagctgtccatgcttgtt--cagatgtcacatgtctcagggtcttgtatctctacccaaggtttgcgttttatgagtataatgagcaaagggtcagtttgagga-cggtaaaatcaaagtgc i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169936386 804 + 171630274 CTGTGGTCTT-GAAGCTTCGGCTGCTATGAAGCCCCGTGGGACGCAGTGGAGAGGAGCTCCCGGATC--AGTCAGCCAGCTGCACTTCC-CATGGTGCTTGACCTCAGGGGCATCACCAG-ACTCCCCA-----------------AATGCCAGCACCTCCAGCACCAATGATGGGGTGTTGGCACTGACTACTCCATGGGGACTAGCGGCACCAAACACTTTGCCATGCAGAATAAGCTGGGCAGTCCGTGGACACCCACATGGTG-----TGTGCATGAATGAGCCCAGATC---CGTCCTCCGT------GTCCACAGAGCATTCCGGCATC-GACCTTGTTACACGACTCACCCACACCGGGACAGAGGGGGCTGCTGTATTATTTTTACTTGAAATtga------tgatggaggtggtaagaccttgggtctgggcttcttagtttacaaggatttaagcaacagacacacagcaaaggggatgcagcatgaagtca-tttattgcaaaggaaaacgaatattttgaaaggtaggcgcagaaca-gacaggacagcttgggagacagaggacagaggattcagggcagg--ctttgaagggtgagacagcagagaccggcc-gagggaggctccctctatgggcgtcttccacaattatccacca-ggggtgggaagaggtgctgcttggaagcgtgttctggaaggttctctgggtgcacacacatgggagctgtccgtgcctgct--cacccatcgcatgtctcagaatcttgtgtctccaccccaggtgtgctttttatggtgatactgagcaaa-ggtcagctcgaggaccagtaaaagcgaagtgc i calJac3.chr4 C 0 C 0 e canFam3.chr1 56209248 4044 + 122678785 I a score=716002.000000 s hg38.chr6_KB021644v2_alt 149718 339 + 185823 acatgctctctgcaggggaaattccctactgaaggtagctttgcttgagggagctcagtgacaatgtcaatgctgaggcttgctgtgttgattttacagtcaccacgtacaccgtacaccactgtccaccaatgtccaccaccactgtgga-------ccacccaaggacacggcgacttccttgactacctatcctgactcaGTGATTGGTATTTAATTTAAATTTTGGAACATTTTGAATTT--AGTTTTTATCAGGGTTCTGCTTCTATCCAGTGCTGACACTTGTGGCAAACCCCGGTGGCATAGAAGCCTTGGTTCTCACATGGATATGTCACTCCCTTCTGA s panTro4.chr6 170738330 339 + 172623881 acatgctctctgcaggggaaattccctactgaaggtagctttgcttgagggagctcagtgacaatatcaatgctgaggcttgctgtgttgattttacagtcaccacgtacaccgtacactactgtccaccaatgtccaccaccactgtgga-------ccacccaaggacacggctacttccttgactacctatcctgcctcaGTGATTGGTATTTAATTTAAATTTTGGAACATTTTGAATTT--AGTTTTTATCAGGGTTCTGCTTCTATCCAGTGCTGACACTCGTGGCAAACCCCGGTGGCATAGAAGCCTTGGTTCTCACATGGATATGTCACTCCCTTCTGA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172492658 329 + 174210431 acatgctctctgcaggggaaattccctactgaaggtagctttgcttgagggagctcaatgacaatgtcaatgctgaggcttgctgtgtcgattttacagttatcacgtacacc-------agtgtccaccaatgtccaccacc---gtgga-------ccacccaaggacacggctacttccttgactacctatcccgcctcaGTGATTGGTATTTAATTTAAATTCTGGAATATTTTGAATTT--AGTTTTTATCAGGGTTCTGCTTCTATCCAGTGCTGACACTCATAGCAAACCCCGGTGGCATAGAAGCCTTGGTTCTCACATGGATATGTCACTCCCTTCTGA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156353456 332 + 157873769 acatgctctctgcaggggaaattccctactgaaggtagctttgcttgagggagctcaatgacaatgtcaatgccgaggcttgctgtgtcgattttactgtcaccgtgtacacc-------agtgtccaccaatgtccaccaccactgtgga-------ccacccaaggacacagctacttccttgactacgtatcctgcctcaGTGATTGGTATTTAATTTAAATTTTGGAACATTTTGAATTT--AGTTTTTATCAGGGTTATGCTTCTATCCAGTGCTGACACTCATAGCAAACCCCGGTGGCATAGAAGCCTTGGTTCTCACATGGATATGTCACTCCCTTCTGA i nomLeu3.chr3 C 0 I 2228 s rheMac3.chr4 168168184 317 + 169853907 acatgctctctgcaggggaaattccctactgaaggtagctttgtttgagcgagctcaatgccaatgccaacatcgaggcttgctgtgtcaattgtacagtcaccacctacacc-----------------aacgtccaccaccactgtggcctgatgtccacccaaggacacggctacttccttgactacctatcctgcctcaGCGATTGGTATTGAATTTAAATTTTGGAACATTTTGAATTTAGAGTTTTTATCAGGGTTCTGCTTCTA--------------TCCTAGAGAACCCCAGTGGCATAGAAGGCTTTATTCTCACATGGATATGTCACTCCCTTCTGA i rheMac3.chr4 C 0 I 4232 s macFas5.chr4 169122852 317 - 170955103 acatgctctctgcaggggaaattccctactgaaggtagctttgtttgagcgagctcaatgccaatgccaacatcgaggcttgctgtgtcaattgtacagtcaccacctacacc-----------------aacgtccaccaccactgtggactgatgtccacccaaggacacggctacttccttgactacctatcctgcctcaGCGATTGGTATTGAATTTAAATTTTGGAACATTTTGAATTTAGAGTTTTTATCAGGGTTCTGCTTCTA--------------TCCTAGAGAACCCCAGTGGCATAGAAGGCTTTATTCTCACATGGATATGTCACTCCCTTCTGA i macFas5.chr4 C 0 I 3595 s papAnu2.chr4 163940899 330 + 165299245 ACATGCTCTCTGCAGGGGAAATTCCCTACTGAAGGTAGCTTTGTTTGAGCGAGCTCAATGCCAATGCCAACATCGAGGCTTGCTGTATCAATTGTACAGTCACCACGTACACC-----------------AATGTCCACCACCACTGTGGACCGATGTCCACCCAAGGACACGGCTACTTCCTTGACTACCTATCCTGCCTCAGCGATtggtatttaatttaaattttggaacattttgaaTTTAGAGTTTTTATCAGGGCT-TGCTTCTATCCAGTGCTGACACTCCTAGCGAACCCCTGTGGCATAGAAGCCTTTGTTCTCTCATGGATATGTCACTCCCTTCTGA i papAnu2.chr4 C 0 I 2677 s chlSab2.chr13 96726552 331 + 98384682 acgtgctctctgcaggggaaattcccgactgaaggtagctttgtttgagcgagctcaatgccaatgccaacgccgacgcttgctgtgtcaattgtacagtcaccacgtacacc-----------------aatgtccaccaccactgtggaccgatgtccacccaaggacacggctacttccttgactacctatcctgcctcaGCGATTGGTATTGAATTTAAATTTTGGAACATTTTGAATTTAGAGTTTTTATCAGGGCTCTGCTTCTATCCAGTGCTGACACTCCTAGCGAACCCTGGTGGCATAGAAGCCTTTGTTCTCACATGGATATGTCACTCCCTTCTGA i chlSab2.chr13 C 0 I 2555 e calJac3.chr4 169937190 0 + 171630274 C e canFam3.chr1 56209248 4044 + 122678785 I a score=1000.000000 s hg38.chr6_KB021644v2_alt 150057 1 + 185823 C s panTro4.chr6 170738669 1 + 172623881 C i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172492987 1 + 174210431 C i ponAbe2.chr6 C 0 I 2454 s nomLeu3.chr3 156356016 1 + 157873769 C i nomLeu3.chr3 I 2228 C 0 s papAnu2.chr4 163943906 1 + 165299245 C i papAnu2.chr4 I 2677 C 0 e calJac3.chr4 169937190 0 + 171630274 C e canFam3.chr1 56209248 4044 + 122678785 I e chlSab2.chr13 96726883 2555 + 98384682 I e rheMac3.chr4 168168501 4232 + 169853907 I e macFas5.chr4 169123169 3595 - 170955103 I a score=613.000000 s hg38.chr6_KB021644v2_alt 150058 2 + 185823 AT s panTro4.chr6 170738670 2 + 172623881 AT i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156356017 2 + 157873769 AC i nomLeu3.chr3 C 0 C 0 s papAnu2.chr4 163943907 2 + 165299245 AC i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169937190 0 + 171630274 C e canFam3.chr1 56209248 4044 + 122678785 I e chlSab2.chr13 96726883 2555 + 98384682 I e rheMac3.chr4 168168501 4232 + 169853907 I e ponAbe2.chr6 172492988 2454 + 174210431 I e macFas5.chr4 169123169 3595 - 170955103 I a score=3822.000000 s hg38.chr6_KB021644v2_alt 150060 2 + 185823 AT s panTro4.chr6 170738672 2 + 172623881 AT i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156356019 2 + 157873769 AT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168172733 2 + 169853907 AT i rheMac3.chr4 I 4232 C 0 s macFas5.chr4 169126764 2 - 170955103 AT i macFas5.chr4 I 3595 C 0 s papAnu2.chr4 163943909 2 + 165299245 AT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96729438 2 + 98384682 AT i chlSab2.chr13 I 2555 C 0 e calJac3.chr4 169937190 0 + 171630274 C e canFam3.chr1 56209248 4044 + 122678785 I e ponAbe2.chr6 172492988 2454 + 174210431 I a score=1535842.000000 s hg38.chr6_KB021644v2_alt 150062 664 + 185823 TGGCACCTGAGCATGACTTCTGCCTACAGAGGTAGGAGCATTGCAGCAGGCAGAGGCCGGCTGCACTGGTGGCTTCAGCGGGGACAGGAGAGGACTCAGGAGTGG-CCCCAGGGATCACCCACAAGCACATATAAAATGGCTTTCAGGACTTCCAGCAACAGTCCAGGGAGGGGATGCTTTATACTGGGAACTAGAACAAGAGAAGTTATCGCTATGTACTGTTTACATACAGCTTTACAACAGGCTCTACTGGCCTGGAGAAAAAGGATAGAAAAGCAAACATACTCATTCATTATTACTTAAGAACAATTCATTCATCGAATCCAAAATATTCACAGAGCAGCAGCTGTGACAAAGCTGATCTGGGTGTCCCTGTTAAACGGAAAATCACATATATAAGAAAGCTTAATTTATGGATATAGAAAAAGAGTGAGGGATTTTG----TCAAATTTTAAAACATGACTAACAAGTGAAGAGTTTAAAAATACCATTATTCTTGAACAAAATACTACACACCTAAGTAACAAACACGGGCGGTCATTGCTTGATATATAAG-----------------------------------------------------------------------CGTTTCTGTGTTAGCAGATGACTGCGTCATACTTTTTGTTTGATGGTCAGAAGTGTGTGAAACGGGCACGTGCTGATTCTCTATTTTGAGGAGGTTTGTGTAATTTGTGT s panTro4.chr6 170738674 668 + 172623881 TGGCACCTGAGCATGACTTCTGCCTACAGAGGTAGGAGCATTGCAGCAGGCAGAGGCCGGCTGCACTGGTGGCTTCAGCGGGGACAGGAGAGGACTCCGGAGTGG-CCCCAGGGATCACCCACAAGCACATATAAAATGGCTTTCAGGACTTCCAGCAACAGTCCAGGGAGGGGATGCTTTATACTGGTAACTAGAACAAGAGAAGTTATCACTATGTACTGTTTACATACAGCTTTACAACAGGCTCTACTGGCCTGGAGAAAAAGGATAGAAAAGCAAACATACTCATTCATTATTACTTAAGAACAATTCATTCATTGAATCCAAAATATTCACGGAGCAGCAGCTGTGACAAAGCTGATCTGGGTGTCCCTGTTAAACGGAAAATCACATATATAAGAAAGCTTAATTTATGGATATAGAAAAACAGTGAGGGATTTTGTCAATCAAATTTTAAAACATGACTAACAAGTGAAGAGTTTAAAAATACCATTATTCTTGAACAAAATACTACACACCTAAGTAACAAACACGGGTGGTCATTGCTTGATATATAAG-----------------------------------------------------------------------CGTTTCTGTGTTAGCAGATGACTGCGTCATACTTTTTCTTTGATGGTCAGAAGTGTGTGAAACGGGCACATGCTGACTCTCTATTTTGAGGAGGTTTGTGTAATTTGTGT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172495442 664 + 174210431 TGGCACCTGAGCATGGCTTCTGCCTACAGAGGTAGGAGCATTGCGGCAGGCAGAGGCCGGCTGCACTGGTGGCTTCAGCCGGGACAGGAGAGGACTCAGGAGCAG-CCCCAGGGATCACCCACAAACACATATAAAATGGCTTTCAGGACTTCCAGCAACAGTCCAGGGAGGGGATGCTTTATACTGGTAACTAGAACAAGAGAAGTTATCACTATGTACTGTTTACATACAGTTTTACAACAGGCTATACTGGCCTGGAGAGAAAGGATAGAAAAGCAAACAT----ATTCATTATTACTTAAGAACAATTCATTCATTGAATCCAAAATATTCATGGAGCAGCAGCTGTGACAAAGCTGATCTGGGTGTCCCTGTTAAACGGAAAATCACATATATAAGAAAGCTTAATTTATGGATATAGAAAAAGAGTGAGGGATTTTGTCAATCAAATTTTAAAATATGACTAACAAGTGAAGAGTTTAAAAATACCATTATTCTTGAACAAAATACTACACACCTAAGTAACAAACATGGGCAGTCATTGCTTGATATATAAG-----------------------------------------------------------------------CGTTTCCCTGTTAGCAGATGACTGTGTCACACTTTTTCTTTTATAGTCAGAAGTGTGTGAAACGGGCACATGCTGATTCTCTGCTTTGAGGAGGTTTGTGTAATTTGTGT i ponAbe2.chr6 I 2454 C 0 s nomLeu3.chr3 156356021 667 + 157873769 TGGCACCTGAGCATGGCTTCTGCCTACAGAGGTAGGAGCATTGAGGCAGGCAGAGGCTGGCTGCACGGGTGGCTTCAACGGGGACAGGAGAGGACTCAGGAGTGG-CCCCAGGGATCACCCACAAGCACATAT-AAATGGCTTTCAGGACTTCCAGCAACAGTCCAGGGAGGGGATGCTTGATACTGGTAACTAGAACAAGAGAAGTTATCACTATGTACTGTTTACGTACACCTTTACAACAGGCTATACTGGCCTGGAGAAAAAGGATAGAAAAGCAAACATACTCATTCATTATTACTTAAGAACAATTCATTCACTGAATCCAAAATATTCATGGAGCAGCAGCTCTGACAAAGCTGATCCGGATGTCCCTGTTAAATGGAAAATCACATATATAAGAAAGCTTAATTTATGGATATAGAAAAAGAGTGAGGGATTTTGTCAATCAAATTTTAAAACATGACTAACAAGTGAAGAGTTTAAAAATACCATTATTCTTGAACAAAATACTACACACCTAAGTAACAAACATGGGCGGTCATTGCTTGATATATAAG-----------------------------------------------------------------------CGTTTCTGTGTTAGCAGATGACTGCGTCACACTTTTTCTTTTATAATCAGAAGTGTGTGAAACTGGCATGCGCTGATCCTCTGCCTTGAGGAGGTTTGTGTAATTTGTGT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168172735 739 + 169853907 TGGCACCTGAGCATGGCTTCTGCCTACAGAGGTAGGAGCATTGCAGCAGGCAGAGGCCGGCTGCACTGGTGGTTTCCACAGGGACAAGAGAGGACTCAGGAGCCGCCCCCAGGGATCACCCACAAGCATGTATAAAATGGCTTTCAGGACTTCCAGAAACAGTCCGGGGAGAGGATGCTTTATACTGGTAACTAGAACAAGAGAAGTTATCATTAT-TACTGTTTACATACAGCTTTACAACAGGCTATACTGGCCTGGAGAAAACAGATAGAAAAGCAAACATACTCATTTATTATTACGTAAGAACAATTCATTCACTGAATCCCAAATATTCATGGAGCACCAGCTGTGACAAAGCTGCTCTGGGTGTCCCTGTGAAATGGAAAACCACATATGTAAGAAAGCTTAATGTATGGATATAGAAGAAGAGTAAGAGATTTTGCCAATCAAATTTTAAAACATGACTAACAAGTGAAGAGTTTAAAAACACCATTATTCTTGAACAAAATCCTACACACCTAAATCACAAACATGGGCAGTCATCGCCTGATATATGAGGTTTTGCGTGTTAGCAGACGACTGCGTCACACTTTTTCTTTTATAGTCAGAAGCGTATGAAATGGGCACACGTTTTGCGTGTTAGCAGACGACTGCGTCGCACTTTTTCTTTTATAGTCAGAAGCGTGTGAAACGGGCACATGCTGATCCTCTGCCTTGAGGAGCTTCGTGTAATTTGTGT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169126766 668 - 170955103 TGGCACCTGAGCATGGCTTCTGCCTACAGAGGTAGGAGCATTGCGGCAGGCAGAGGCCGGCTGCACTGGTGGTTTCAGCAGGGACGGGAGAGGACTCAGGAGCCGCCCCCAGGGATCACCCACAAGCATGTATAAAATGGCTTTCAGGACTTCCAGAAACAGTCCGGGGAGGGGATGCTTTATACTGGTAACTAGAACAAGAGAAGTTATCATTAT-TACTGTTTACATACAGCTTTACAACAGGCTATACTGGCCTGGAGAAAACAGATAGAAAAGCAAACATACTCATTTATTATTACGTAAGAACAATTCATTCACTGAATCCCAAATATTCATGGAGCACCAGCTGTGACAAAGCTGCTCTGGGTGTCCCTGTGAAATGGAAAACCACATATGTAAGAAAGCTTAATGTATGGATATAGAAGAAGAGTAAGAGATTTTGCCAATCAAATTTTAAAACATGACTAACAAGTGAAGAGTTTAAAAACACCATTATTCTTGAACAAAATCCTACACACCTAAATCACAAACATGGGCAGTCATCGCCTGATATATGAG-----------------------------------------------------------------------GTTTTGCGTGTTAGCAGACGACTGCGTCGCACTTTTTCTTTTATAGTCAGAAGCGTGTGAAACGGGCACACGCTGATCCTCTGCCTTGAGGAGCTTCGTGTAATTTGTGT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163943911 668 + 165299245 TGGCACCTGAGCATGGCTTCTGCCTACAGAGGTAGGAGCATTGCGGCAAGCAGAGGCTGGCTGCACTGGTGGCTTCAGCAGGGACAGGAGAGGACTCAGGAGCAGCCCCCAGGGATCACCCACAAGCATGTATAAAATGGCTTTCAGGACTTCCAGAAGCAGTCCGGGGAGGGGATGCTTTATACTGGTAACTAGAACAAGAGAAGTTATCATTAT-TACTGTTTACATACAGCTTTACAACAGGCTATACTGGCCTGGAGAAAACAGATAGAAAAGCAAACATACTCATTTATTATTACATAAGAACAATTCATTCACCGAATCCCAAATATTCATGGAGCACCAGCTGTGACAAAGCTGCTCTGGGTGTCCCTGTGAAATGGAAAACCACATATGTAAGAAAGCTTAACGTATGGATATAGAAGAAGAGTGAGAGATTTTGtcaatcaaattttaaaacatgactaACAAGTGAAGAGTTTAAAAACACCATTATTCTTGAACAAAATCCTACACACCTAAATCACAAACATGGGCAGTCATCGCCTGATATATGAG-----------------------------------------------------------------------GTTTTGCGTGTTAGCAGACGACTGCGTCgcactttttcttttatagtcaGAAGCGTGTGAAACGGGCATGTGCTGATCCTCCGCCTTGAGGAGCTTCGTGAAATTTGTGT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96729440 668 + 98384682 TGGCACCTGAGCATGGCTTCTGCCTACAGAGGTAGGCGCATTGCGGCAGGCAGAGGCC-ACCACACTGGTGGCTTCAGCAGGGACAGGGGAGGACTCAGGAGCCGCCCCCAGGGATCACCCACAAGCATGTATAAAATGGCTTTCAGGACTTCCAGAAACAGTCCGGGGAGGGGATGCTTTATACTGGTAACTAGAACAAGAGAAGTTATCATTATGTACTGTCTACATACAGCTTTACAACAGGCTATACTGGCCTGGAGAAAAAGGATAGAAAAGCAAACATACTCATTTATTATTATGTAAGAACAGTTCATTCACTGAATCCCAAATATTCATGGAGCAGCAGCTGTGACAAAGCTGCTCTGGGTGTCCCTGTGAAACGGAAAACCACATATGTAAGAAAGCTTAATGTATGGATATAGAAGAAGAGTGAGAGATTTTGTCAATCAAATTTTAAAACATGACTAACAAGTGAAGAGTTTAAAAATACCATTATTCTTGAACAAAATCCTACACACCTAAATCACAAACATGGGCAGTCATCGCCTGATATATGAG-----------------------------------------------------------------------GTTTTGCATGTTAGCAGACGACTGCGTCACACTTTTTCTTTTATAGTCAGAAGCGTGTGAAACGGGCATGCGCTGATCCTCTGCCTTGAGGAGCTTCGTGAAATTTGTGT i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169937190 0 + 171630274 C e canFam3.chr1 56209248 4044 + 122678785 I a score=553175.000000 s hg38.chr6_KB021644v2_alt 150726 208 + 185823 TGTCATGTTGCTCTGAAGCCCTCTGAGATGAGCCTGGGAGGTGTTGCCTTGGTGCACAGAGACATGTCACAGTGTAGACTGTGGCCCTCCCACGTTGATTCAGGGGTGCTGCGGCAGGCGTGTGGAGGGGACCCCACGCAGGAGCACCTCCTCATCCCTGAGGAGCTGGGGGACTCCTGGCAGATGCAGCCCCA-------------------------------------------------------------------------CCAAGCTGCCCTGG s panTro4.chr6 170739342 208 + 172623881 TGTGATATTGCTCTGAAGCCCTCTGAGATGAGCCTGGGAGGTGTTGTCTTGGTGCACAGAGACGCGTCACAGTGTAGACTGTGGCCCTCCCACGTTGATTCAGGGGTGCTGTGGCAGGCGTGTGGAGGGGACCCCACGCAGGAGCACCTCCTCATCCCTGAGGAGCTGGGGGACTCCTGGCAGATGCAGCCCCA-------------------------------------------------------------------------CCAAGCTGCCCTGG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172496106 208 + 174210431 TGTGATGTTGCTCTGAAGCCCTCTGAGATGAGCCTGGGAGGTGTTACCTTGGTGCACACAGACGCATCACAGTGTAGACTGTGGCCCTCCCACGTTGAGTCAGGGGTGCTGCGGCAGGCATGTGGAGGGGACCCCACGCAGGAGCACGTCCTCATCCCTGAGGAGCTGGGGGACTCCTGGCAGACGCAGCCCCA-------------------------------------------------------------------------CCAAGCTGCCCTGG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156356688 208 + 157873769 TGTGATGTTGCTGTGAAGCCCTCTGAGATGGGCCTGGGAGGTGTTGCCTTGGTGCACAGAGACGCGTCACAGTGTAGACTGTGGCCGTCCCACGTTGAGTCAGGGGTGCTGCGGCAGGCGTGTGGAGGGGACCCCACGCAGAAGCACATCCTCATCCCTGAGGAGCTGGGGGACTCCGGGCAGACGAAGCACCA-------------------------------------------------------------------------CCAAGCTGCCCTGG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168173474 208 + 169853907 TATGATGTCGCTCTGAAGCCCTCTGAGATGAGCCTGGGAGGTGTTGCCTGGGTGCACAGAGACGCGTCACAGTGTAGACCGTGGCCCTCCCAAGTCGAGTCAGGGGTGCTGCTGCAGGTATGTGGAGGGGACCCCATGCAGGAGCGCGTCATCATCCCTGGGGAGCTGGGGGACTCCTGGCAGACGCAGCCCCA-------------------------------------------------------------------------CGAAGCTGTCCTTG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169127434 208 - 170955103 TATGATGTCGCTCTGAAGCCCTCTGAGATGAACCTGGGAGGTGTTGCCTGGGTGCACAGAGACGCGTCACAGTGTAGACCGTGGCCCTCCCAAGTCGAGTCAGGGGTGCTGCTGCAGGCATGTGGAGGGGACCCCATGCAGGTGAGCGTCATCATCCCTGGGGAGCTGGGGGACTCCTGGCAGACGCAGCCCCA-------------------------------------------------------------------------CGAAGCTGTCCTTG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163944579 208 + 165299245 TATGATGTCACTCTGAAGCCCTCTGAGATGAGCCTGGGAGGTGTTGCCTGGGTGCACAGAGACGCGTCACAGTGTAGACCGTGGCCCTCCCAAGTCGAGTCAGGGGTGCTGCTGCAGGCATGTGGAGGGGACCCCATGCAGGAGCGCGTCATCATCCCTGGGGAGCTGGAGGACTCCTGGCAGACGCAGCCCCA-------------------------------------------------------------------------CGAAGCTGTCCTTG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96730108 207 + 98384682 TATGATGTCACTCTGAAGCCCTCTGAGATGAGCCTGGGAGGTGTTGCCTGGGTACACAGAGACGCGTCACAGTGTAGACTGTGGCCCTCCCAAGTCGAGTCAGGGGTGCTGCTGCAGG-GTGTGGAGGGGACCCCATGCAGGAGCGCGTCATCATCCCTGGGGACCTGGGGGACTCCTGGCAGACGCAGCCCCA-------------------------------------------------------------------------CCAAGCTGCCCTTG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169937190 262 + 171630274 TGTGGCATTGCTCGTAAGCCCTCCAAGGTGAGTCTGGGAGGTGTTACCTGAGTGCA------------------TAGACCGTGGCCCTCCCATGTCAGGTCTGGGATGCTGCTGCAGGTGCGTGGAGGGGACCCCATGCAGGAGTGTGTCCTCATTCCTGGAGAGGCAGGGAACTCCT-GCAGACACAGCCCCACCGTGGAGGGGACCGGAAGCAAGAGCGTGTCCTCAAGCCTGGGAGGTGGGAGACTCCTAGCAGACAAAGTCCCCCAAGGGGCCCTTG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56209248 4044 + 122678785 I a score=492465.000000 s hg38.chr6_KB021644v2_alt 150934 157 + 185823 GGCCCCACAGTGCCCGGTGTCCGGCTTCAGACAGACAAGCAGCTGTCCTATCGCTT-CCTCTTATTTTTAAGCCACTGCTTGAATGC-TTCGTACTCATATAAAGGATCTCTGACATTGCTTTTCAGAATCGAGGAATTTCTTCATATCCTATGGCTTA s panTro4.chr6 170739550 157 + 172623881 GGCCCCACAGTGCTCGGTGTCCGGCTTCAGACAGACAAGCAGCTGTCCTATCGCTT-CCTCTTATTTTTAAGCCACTGCTTGAATGC-TTCGTACTCATATAAAGGATCTCTGACATTGCTCTTCAGAATCGAGGAATTTCTTCATATCCTATGGCTTA i panTro4.chr6 C 0 I 194 s ponAbe2.chr6 172496314 157 + 174210431 GGCCCCACAGTCCTCGGTGTCCGGCTTCAGACAGACAAGCAGCTGTCCTATCTCTT-CCTCTTATTTCTAAGCCACTGCTTGAATGC-TTTGTACTCATATAAAGGATCTCTGACATTGCTTTTCAGAATTGAGGAATTTCTTCATATCCTATGGCTTA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156356896 157 + 157873769 GGCCCCACAGTGCTCGGTGTCTGGCTTCAGACAGACAAGCAGCTGTCCTATCGCTT-CCTCTTATTTCTGAGCCACTGCTTGAATGC-TTCGTACTTATATAAAGGATCTCTGACATTGCTTTTAAGAATCGAGGAATTTCTTCATATCCTATGGCTTA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168173682 157 + 169853907 GGCCCCCCAGTGCTCGGTGTCCGGCTTCAGATAGACAAGCAGCTGTGCTATCGCTT-CCTCTTATTTCTAAGCCACTGCTTGAATGC-TTCTTACTCATATAAAGGATTTCTGACATTGCTTTTCAGAATCGAGGAATTTCTTCATATCCTATGGCTTA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169127642 157 - 170955103 GGCCCCCCAGTGCTCGGTGTCCGGCTTCAGATAGACAGGCAGCTGTGCTATCGCTT-CCTCTTATTTCTAAGCCACTGCTTGAATGC-TTCTTACTCATATAAAGGATTTCTGACATTGCTTTTCAGAATCGAGGAATTTCTTCATATCCTATGGCTTA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163944787 157 + 165299245 GGCCCCCCAGTGCTCGGTGTTTGGCTTCAGATAGACAAGCAGCTGTCCTATCGCTT-CCTCTTATTTCTAAGCCACTGCTTGAATGC-TTCTTACTCATATAAAGGATTTCTGACATTGCTTTTCAGAATCGAGGAATTTCTTCATATCCTATGGCTTA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96730315 157 + 98384682 GGCCCCCCAGTGCTCGGTGTCCCGCTTCAGATAGACAAGCAGCTGTCCTATCGCTT-CCTCTTATTTCTAAGCCACTGTTTGAATGC-TTGTTACTCATATAAAGGATTTCTGACATTGCTTTTCAGAATCGAGGAATTTCTTCATATCCTATGGCTTA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169937452 142 + 171630274 GGCCCGACAGTGCTGGGTA--CAGCTTCAGATAGACAGGCA-------------CT-GCTCTTATTTCTAAGCCACCGCTTGGATGC-TTCTCACCAATATGATGGATCTCTGACCTTTTTTTTCAGAGCTGAGGAATTTCTTCCTATCCTATGGGTTA i calJac3.chr4 C 0 C 0 s canFam3.chr1 56213292 159 + 122678785 GGTCCCAACATATTCGGTAGATGGTTCTGAATAGACCAACAAATGTCATTTTACCTGCCAGTTTTGTCTAAATAACATTTTGAAAACTTTTTTATCCTTATAAGCCATCTTTGACGTTATTTTTCAGAATGGAGGAATTTCTTCACGTCCTGTGGTTTC i canFam3.chr1 I 4044 C 0 a score=226141.000000 s hg38.chr6_KB021644v2_alt 151091 65 + 185823 GATTTTGCCAGATCAGAGGAAAATTGTGG-CCACCCTGGGCAGACCTATTCCTGGAAATGGCCTTT s panTro4.chr6 170739901 65 + 172623881 GATTTTGCCAGATCAGAGGAAAATTGTGG-CCACCCTGGGCAGAGCTATTCCTGGAAATGGCCTTT i panTro4.chr6 I 194 C 0 s ponAbe2.chr6 172496471 65 + 174210431 GATTTTGCCAGATCAGAGGAAAATTGTGG-CCACCCTGGGCAGACCTATTCCTGGAAATGGCCTTT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156357053 65 + 157873769 GATTTTGCCAGATCAGAGGAAAATTGTGG-CCACCCTGGGCAGACCTATTCCTGGAAATGGCCTTT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168173839 65 + 169853907 GATTTTGCCAGATCAGAGGAAAATTGTGG-CCACCCAGGGCAGGCCTATTCCCGGAAATGGCCTTT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169127799 65 - 170955103 GATTTTGCCAGATCAGAGGAAAATTGTGG-CCACCCAGGGCAGGCCTATTCCCGGAAATGGCCTTT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163944944 65 + 165299245 GATTTTGCCAGATCAGAGGAAAATTGTGG-CCACCCAGGGCAGGCCTATTCCCGGAAATGGCCTTT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96730472 65 + 98384682 GATTTTGCCAGATCAGAGGAAAATTGTGG-CCACCCAGGGCAGGCCTATTCCCGGAAATGGCCTTT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169937594 66 + 171630274 AATTCCGCCCAATCAGAGGAAAATTGTGGCCCCCCCTGGGCCGACCTATTCCTGGAAATGGCCTTT i calJac3.chr4 C 0 I 468 s canFam3.chr1 56213451 60 + 122678785 GACTTCGTCAGCTCAG-GGAAGATTGTGG-CCACCCTGGGCAGACCCAGCCCTGGGGACGGC---- i canFam3.chr1 C 0 C 0 a score=342888.000000 s hg38.chr6_KB021644v2_alt 151156 115 + 185823 GCCAGTGGCGAGATCTCTAATCCACAGGCATTCCGGCTGCCAAATTCCTGGCCTTTGAAGGCTGCAGCTGGGGAAAAGCCACTCTGCATCAGTTCATGTTTCTTTTTCAAACTTT--- s panTro4.chr6 170739966 115 + 172623881 GCCAGTGGCGAGATCTCTAATCCACAGGCCTTCCTGCTGCCAAATTCCTGGCCTTTGAAGCCTGCAGCTGGGGAAAAGCCACTCTGCATCAGTTCATGTTTCTTTTTCAAACTTT--- i panTro4.chr6 C 0 I 2 s ponAbe2.chr6 172496536 114 + 174210431 GCCAGCGGTGAGTTCTCTAATCCACAGGCCTTCCTGCTACCAAATTCCTGGCCTTTGAAGCCTGCAGCT-GGGAAAAGCCACTCTGCATCAGTTCATGTTCCTTTTTCAGACTTT--- i ponAbe2.chr6 C 0 I 691 s nomLeu3.chr3 156357118 115 + 157873769 GCCAGTGGCGAGATCTCTAATCCACAGGCCTTCCTGCTGCCAAATTCCTGGCCTTTGAAGCCTGCAGCTGGGGAAAAGCCACTCTGCATCAGTTCATGTTTCTTTTTCAAACTTT--- i nomLeu3.chr3 C 0 I 2 s rheMac3.chr4 168173904 115 + 169853907 GCCAGTCGCGAGATCTCTAATCCACAGGCCTCCCTGCTGCCAAATTCCTGGCTTTTGAAGCCTGCTGCTGGGGAAAAGCCACTCTGCATCAGTTAATGTTTCTTTTTCAAACTTT--- i rheMac3.chr4 C 0 I 2 s macFas5.chr4 169127864 115 - 170955103 GCCAGTCGCGAGATCTCTAATCCACAGGCCTCCCTGCTGCCAAATTCCTGGCTTTTGAAGCCTGCTGCTGGGGAAAAGCCACTCTGCATCAGTTAATGTGTCTTTTTCAAACTTT--- i macFas5.chr4 C 0 I 2 s papAnu2.chr4 163945009 115 + 165299245 GCCAGTCGCGAGATCTCTAATCCACAGGCCTCCCTGCTGCCAAATTCCTGGCTTTTGAAGCCTGATGCTGGGGAAAAGCCACTCTGCATCagttaatgtttctttttcaaacttt--- i papAnu2.chr4 C 0 I 2 s chlSab2.chr13 96730537 115 + 98384682 GCCAGTCGCAAGATCTCTAATCCACAGGCCTCCCTGCTGCCAAATTCCTGGCTTTTGAAGCCTGCAGCTGGGGAAAAGCCACTTTGCATCAGTTAATGTTTCTTTTTCAAACTTT--- i chlSab2.chr13 C 0 I 2 s calJac3.chr4 169938128 115 + 171630274 GCCATTGATGAGATTTTTAATCCACAGGTCTTCGTGCGGACAAATTCCTGAGCTTTGAAGCATGCAGCTGGGGAAAAGCTACTAGGCATCAATTAATGTATTCTTTTCAAACTTT--- i calJac3.chr4 I 468 I 2 s canFam3.chr1 56213511 88 + 122678785 ----------------CTAATCTGCCGGGCTTCCTCCTGCCGAACCCCTG-CCTTTGAGGCAGGCAGCTGGAG-AAAGCCGATGAGCA------------CATTTTCCTAACGTCTTC i canFam3.chr1 C 0 C 0 a score=997992.000000 s hg38.chr6_KB021644v2_alt 151271 335 + 185823 CCCCTTCTATTATTTCACAACCAAACTCTGCCAGGGCCTGGCTTTTAGTTATTAAAGGGCC--AAGCATCATTTTTTT-CCAATGCTTTTAAAAAGGAGGGGAAGGGTTTCCCAG-AGATACGTGGTGCCTTCCCCGTGCAC-------ACAG--ATGCT-------------CCAGAATCACAGCCGCCTTCTATGAACTCTCGTGCAGGGCCT-CATCTTCCATGGTTAATTTAGCAATAGGGATTGTGTGC-TTCAAAGCGATACCTCATTCCTAGGTAGAAATTTATTTAACTTCAAAAACCTTTATTGTTGAATATATTAAGAACTACGTCTTAGTGATGATGATATGAGAAATTCAT s panTro4.chr6 170740083 335 + 172623881 CCCCTTCTATTATTTCACAACCAAACTCTGCCAGGGCCTGGCTTTTAGTTATTAAAGGGCC--AAGCATCATTTTTTT-CCAATGCTTTTAAAAAGGAGGGGAAGGGTTTCCCAG-AGATACGTGGTGCCTTCCCCGTGCAC-------ACAA--ACGCT-------------CCAGAATCACAGCCACCTTCTATGAACTCTCGTGCAGGGCCT-CATCTTCCATGGTTAATTTAGCAATAGGGATTGTGTGC-TTCAAAGCGATACCTCATTCCTAGGTAGAAATTTATTTAACTTCAAAAACCTTTGTTATTGAATATATTAAGAACTACGTCTTAGTGATGATGATATGAGAAATTCAT i panTro4.chr6 I 2 C 0 s ponAbe2.chr6 172497341 336 + 174210431 CCCCTTCTAGTATTTCACAATCAAACTCTGCCAGGGCCTGGCTTTTAGTTATTAAAGGGCC--AAGCATCATTTTTTTCCCGATGCTTTTAAAAAGGAGGGGAAGGGTTTCCCAG-AGATACGTGATGCCTTCCCCGTGCAC-------ACAG--ACGCT-------------CCAGAATCACAGCCACCCTCTATGAACTCTTGTGCAGGGCCT-CATCTTCCATGGTTAATTTAGCAATAGGGATTGTGTGC-TTGAAAGCGATACCTCATTCCTAGGTAGAAATTTATTTAACTTCAAAAACCTTTATTGTTGAATATATTAAGAACTACATCTTAGTGATGATGATATGAGAAATTCAT i ponAbe2.chr6 I 691 C 0 s nomLeu3.chr3 156357235 335 + 157873769 CCCCTTCTGTTATTTCACAACCAAACTCTGCCAGGGCCTGGCTTTTAGTTATTAAAGGGCC--AAGCATCATTTTTTT-CCAATGCTTTTAAAAAGGAGAGGAAGAGTTTCCCAG-AGATACGTGGTGCCTTCCCCGTGCAC-------ACAG--ACGCT-------------GCAGAATCACAGCTGCCTTCTATGAACTCTCGTGCAGGGCCT-CATCTTCCATGGTTAGTTTAGCAATAGGGATTGTGTGC-TTCAAAGCAATACCTCATTCCTAGGTAGAAATTTATTTAACTTCAAAAACCTTTATTGTTGAATATATTAAGAACTACGTCTTTGTGATGATGATATGAGAAATTCAT i nomLeu3.chr3 I 2 C 0 s rheMac3.chr4 168174021 333 + 169853907 CCCCTTCTATTATTTCACAACCAAACTCTGCCAGGGCTTGGCTTTGAGTTATTAAAGGGCCAAAAGCATCATTTTCTT-CAGATGCTTTTAAAGAGGAGGGGAAGGGTTTCCCAG-AGATATGTGGTGCCTTCCCCGTGCAC-------------ATGTT-------------CCATAATCAAAGCAGCCTTCTATGAACTCTCGTGCAGGGCCT-CATCTTCCATGGTTAATTTAGCAATAGGGATCGTGTGC-TTCAAAGCAATACCTCATTCCTAGGGAGAAATTTATTTAACCTCAGGAAACTTTATTGCTGAATATATTAAGAACTACATGTTCGTGATGATGATATGAGAAATTCAT i rheMac3.chr4 I 2 C 0 s macFas5.chr4 169127981 333 - 170955103 CCCCTTCTATTATTTCACAACCAAACTCTGCCAGGGCTTGGCTTTGAGTTATTAAAGGGCCAAAAGCATCATTTTCTT-CAGATGCTTTTAAAGAGGAGGGGAAGGGTTTCCCAG-AGATATGTGGTGCCTTCCCCGTGTAC-------------ATGTT-------------CCAAAATCAAAGCAGCCTTCTATGAACTCTCGTGCAGGGCCT-CATCTTCCATGGTTAATTTAGCAATAGGGATCGTGTGC-TTCAAAGCAATACCTCATTCCTAGGGAGAAATTTATTTAACCTCAGGAAACTTTATTGCTGAATATATTAAGAACtacatgttcgtgatgatgatatgagaaattcat i macFas5.chr4 I 2 C 0 s papAnu2.chr4 163945126 333 + 165299245 ccCCTTCTATTATTTCACAACCAAACTCTGCCAGGGCTTGGCTTTGAGTTATTAAAGGGCCAAAAGCATCATTTTCTT-CAGATGCTTTTAAAGAGGAGGGGAAGGGTTTCCCAG-AGATATGTGGTGCCTTCCCCGTGCAC-------------ATGCT-------------CCAAAATCACAGCAGCCTTCTATGAACTCTCGTGCGGGGCCT-CATCTCCCATGGTTAATTTAGCAATAGGGATCGTGTGC-TTCAAAGCAATACCTCATTCCTAGGGAGAAATTTATTTAACCTCAGGAAACTTTATTGCTGAATATATTAAGAACTACATGTTCGTGATGATGATATGAGAAATTCat i papAnu2.chr4 I 2 C 0 s chlSab2.chr13 96730654 333 + 98384682 CCCCTTCTATTATTTCACAACCAAACTCTGCCAGGGCCTGGCTTTGAGTTATTAAAGGGCCCACAGCATCATTTTCTT-CAGATGCTTTTAAAGAGGAGGGGAAGGGTTTCCCAG-AGATACGTGGTGCCTTCCCCGTGCAC-------------ACGCT-------------CCAAAATCACAGCAGCCTTCTATGAACTCTCGTGCAGGGCCT-CATCTTCCATGGTTAATTTAGCAATAGGGATTGTGTGC-TTCAAAGCGATACCTCATTCCTAGGGAGAAATTTATTTAACCTCAGGAACCTTTATTGCTGAATATATTAAGAACTACATGTTAGTGATGATGACATGAGAAATTCAT i chlSab2.chr13 I 2 C 0 s calJac3.chr4 169938245 331 + 171630274 CCCCGTTTGTTATTTCATAAACAAACGCTGCCAGGGCTTGGCTTTCGGTTATTAAAGGGCC--AAGCATCATTTTTTC-CAGACGTTTGTAAAAAGGAGGGGAAGGGTTTCCCAG-AGGTATGTGGCACGTTCCCCTTGCACCCCGTGTACAGGTGTGCT-------------CCAAAAT-----------TCTGCCAACTCTCACGCAGGGCCTCCGTCTTCCAGGGTGAATTTAGCAATAGGGATTGTGTGC-CTCCTGGTGATATCTCATTCTTAGAAAGAAATTCATTTAACCTCATCAACCTTTGTTGTTGAATATATTGTGAACTATCTGTTAG---TGATGACATGAGAAATTCAT i calJac3.chr4 I 2 C 0 s canFam3.chr1 56213599 318 + 122678785 CCTATTCTTTCGTTTCACAATCA------GGCAGGGCTTTGCTTTCAATTACTAAAGAGCC--AAGGATCATTTTTCA-------ACCTCAAAAATAAAGACAACAGTTTGCAAACAGTTATGTAGTG---TTTCCATGCAC-------ACGT--GTGTTTCATTCAAGCAGATCAAAATCAGGCCCAACGTTAAGGAACT-----------CCA-TGCTTACCGTGGTTCA-TCAGACGCAGGGATGGTGTGAGGTTAACATGATGCCTCATTCCTACAGAGAAACTCATGTAGC-GCAGAAACTTTTACTGTCGGGTATATTAAGAAATGAAT----GTGACAATGGCATGAGAAAATCAT i canFam3.chr1 C 0 I 23 a score=882455.000000 s hg38.chr6_KB021644v2_alt 151606 314 + 185823 CTATCAAAACATCACTAGAGggccgggcgtggtggttcacgcctataatcccagcactttgggaggccgaggcaggtggatcacttgaggtcaggggttcaagaccagcctgaccaacatgatgaaaccctgcatctactaaaaatacaaaaattagccgggcatggtggtgggcgcctgtaatcccagctacttgggaggctgagccaggagaattgcttgaatctgggaggcagaggttgcagtgagccgagatcacaccactgcactccagcctgggcatcaagagtaaaactcagtctggaaaaaaaaaa s panTro4.chr6 170740418 314 + 172623881 CTATCAAAACATCACTAGAGggccgggcgtggtggttcacgcctataatcccagcactttgggaggccgaggcaggtggatcacttgaggtcaggggttcaagaccagcctgaccaacgtgatgaaaccctgcatctactaaaaatacaaaaattagccaggcatggtggtgggcgcctgtaatcccagctacttgggaggctgagccaggagaattgcttgaatctggcaggcagaggttgcagtgagccgagatcacaccactgcgctccagcctgggcatcaagagtaaaactcagtctggaaaaaaaaaa i panTro4.chr6 C 0 M 947 s ponAbe2.chr6 172497677 314 + 174210431 CTATCAAAACATCACTAGAGggccgggcgtggtggttcatgcctataatcccagcactttgggaggccgaggcaggtggatcacttgaggtcaggggttcaagaccagcctgaccaacatgatgaaaccctgtgtctactaaaaatacaaaaattagccgggcatgctggtggatgcctgtaatcccagctactcgggaggctgagccaggagaattgcttgaatctgggaggcagaggttgcagtgagccgagatcacaccactgcactccagcctgggcatcaagagtaaaactcagtctggaaaaaaaaga i ponAbe2.chr6 C 0 I 1 s nomLeu3.chr3 156357570 314 + 157873769 CTATCAAAACATCACTAGAGggctgggcatggtggctcacgcctataatcccagcactttgggaggccgaggcaggtggatcacttgaggtcaggggttcgagaccagcctgaccaacatgatgaaaccctgtgtctactaaaaatacaaaagttagccggacatggtgatgcgtgcctgtaatcccagctactcgggaggctgagccaggagaattgcttgaacccgggaggcggaggttgcagtcagctgagatggtgccatttcactccagcctgggcatcaagagtaaaactcagtgtggaaaaaaaaaa i nomLeu3.chr3 C 0 I 2 s rheMac3.chr4 168174354 312 + 169853907 CTATCAAAACATCACTAGAGggccgggcgccgtggttcacacctgtaatcccagcactttgggaagccgaggcaggtggatcacttgaggtcaaggatatgagaccagcctgaccaacatgttgaaaccctgtgtctactaaaaatacaaaaattagctgggcatggtggtgcatgcctgtaatcccagctactcaggaggccgagctaggagaattgctcgaacccaggaggcggaggttgtagtgagtggagatcgtgcca--gcactccaacctgggcatcaagggtaaaactcagtctagaaaaaaacaa i rheMac3.chr4 C 0 I 2 s macFas5.chr4 169128314 312 - 170955103 ctatcaaaacatcactagagggccgggcgccgtggttcacacctgtaatcccagcactttgggaagccgaggcaggtggatcacttgaggtcaaggatatgagaccagcctgaccaacatgatgaaaccctgtgtctactaaaaatacaaaaattagctgggcatggtggtgcatgcctgtaatcccagctactcaggaggccgagctaggagaattgctcgaacccaggaggcggaggttgtagtgagcggagatcgtgcca--gcactccaacctgggcatcaagggtaaaactcagtctagaaaaaaacga i macFas5.chr4 C 0 I 2 s papAnu2.chr4 163945459 310 + 165299245 ctatcaaaacatcactagagggccgggcaccgtggttcacacctgtaatcccagcactttgggaagccgaggcaggtggatcacttgaggtcaaggatatgagaccagcctgaccaacatgatgaaaccctgtgtccactaaaaatacaaaaattagctgggcatggtggtgcatgcctgtaatcccagctactcaggaggccgagctaggagaattgctcgaacccaggaggcggaggttgtagtgagcggagatcgtgcca--gcactccaacctgggcatcaAGGGTAAAACTCAGTCTAGaaaaaaaC-- i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96730987 312 + 98384682 CTATCAAAACATCACTAGAGggctgggcacggtggttcatgcctgtaatcccagaactttggaaggccgaggcaggtggctcgcttgaggtcaggggtttgagaccagcctgatcaacatgatgaaaccctgtgtctactaaaaatacaaaaattagctgggcatggtggtgcatgcctgtaatcccagctactcaggaggccgagctaggagaattgctcgaaccccggaggcggaggttgtagtgagcggagatcgtgcca--gcactccagcctgggcatcaagggtaaaactcagtctagaaaaaaacaa i chlSab2.chr13 C 0 I 2 s calJac3.chr4 169938576 303 + 171630274 CTGTCAAAACATCACTAGGGGGCCAGGCG----------cgcctgtaatcacagcactttgggaggcttcggtgggtggatcacttgacgtcaggggttcaagaccagcctggccaacatggcaaaaccctgtctctactaaaaatacacaaattagccgggcatggtggtgcatgcttgtaatctcagctactcaggaggctgaggcaggagaatcgcttgaacccaggaggcaaaggttgcagtgagctgggattacaccactgcactgcagcct-ggcaacaagagcaaaactctgtcaaaaaaaaaaaaa i calJac3.chr4 C 0 C 0 e canFam3.chr1 56213917 23 + 122678785 I a score=177485.000000 s hg38.chr6_KB021644v2_alt 151920 90 + 185823 TCACTAGGCACCCCCATGATTATGTACAATTCTTTCTTGTAAATTAATAAAATA----CTTTTTTA---AAAATGAGGATTATAGTTAAGAGCATTA s ponAbe2.chr6 172497992 89 + 174210431 TCACTAGGCACCCCCATGATTATGTACAATTCttttat-taaattaataaaata----ctttttta---aaaatGAGGATTATAGTTAAAAGCATTA i ponAbe2.chr6 I 1 M 1336 s nomLeu3.chr3 156357886 93 + 157873769 TCACTAGACACCTCCATAATTATGTACAATTCTTTCTTGTAAATTAATAAAATAAAATAATTTTTT---AAAATGAGGATT-TAGTTAAGAGCATTA i nomLeu3.chr3 I 2 C 0 s rheMac3.chr4 168174668 93 + 169853907 tcactaggcacc-ccatgactatgtacaattctttcttgtaaattaataaaataaAATTCTTTTTT---TAAATGATGATTATAGTTAAGAGCATTA i rheMac3.chr4 I 2 C 0 s macFas5.chr4 169128628 93 - 170955103 tcactaggcacc-ccatgactatgtacaattctttcttgtaaattaataaaataaAATTCTTTTTT---AAAATGATGATTATAGTTAAGAGCATTA i macFas5.chr4 I 2 C 0 s papAnu2.chr4 163945769 95 + 165299245 TCACTAGGCACC-CCATGACTATGTACAattctttcttgtaaattaataaaataaacttctttttt-taaaaatgaggattaTAGTTAAGagcatta i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96731301 96 + 98384682 TCACTAGGCAGC-CCATGACTATGTACAATTCTTTCTTGTAAATTAATAAAATAAAATTCTTTTTTTTTAAAATGAGGATTGTAGTTAAGAGCATTA i chlSab2.chr13 I 2 C 0 s calJac3.chr4 169938879 90 + 171630274 tcaataggcacc-ccgtgactatgtacaattatttcttgtcaattaataaaataaAATATTTT------TAAATGAGGATTATAGTTAAGAGCATTA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56213917 23 + 122678785 I e panTro4.chr6 170740732 947 + 172623881 M a score=94943.000000 s hg38.chr6_KB021644v2_alt 152010 74 + 185823 CATTAAAAAAGAAATGTCTATTTAATTATGAAAACTGAGATAATGAGGTAGAGAGTGGtttttttgttttgttt s nomLeu3.chr3 156357979 66 + 157873769 CATTAAAAAAGAAATGTC----TAATTATGAAAACTGAGCTAATGAGGTAGAGAGTGGtttt----ttttgttt i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168174761 70 + 169853907 CATTAAAAAAGAAATGTTTATTTAATTATGAAAACTGAGATAATGAGGTAGAGTGTTTTTAT----Ttttattt i rheMac3.chr4 C 0 I 4 s macFas5.chr4 169128721 70 - 170955103 CATTAAAAAAGAAATGTTTATTTAATTATGAAAACTGAGATAATGAGGTAGAGTGTTtttat----ttttattt i macFas5.chr4 C 0 I 4 s papAnu2.chr4 163945864 70 + 165299245 cattaaaaaagaaatgtttatttaattatgaaaactGAGATAATGAGGtagagtgtttttat----ttttattt i papAnu2.chr4 C 0 I 4 s chlSab2.chr13 96731397 70 + 98384682 CATTAAAAAAGAAATGTTTATTTAATTATGAAAACTGAGATAATGAGGTAGAGTGTTtttat----ttttattt i chlSab2.chr13 C 0 I 4 s calJac3.chr4 169938969 51 + 171630274 -AGTTAAATAGAAATATCTATTTAATTATGAAAACTGAGATAATGAGGTAGA---------------------- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56213917 23 + 122678785 I e ponAbe2.chr6 172498081 1336 + 174210431 M e panTro4.chr6 170740732 947 + 172623881 M a score=492279.000000 s hg38.chr6_KB021644v2_alt 152084 224 + 185823 ttttgttt--ttttga----gatggattcttgctctgttgctcaggctgaagtgcagtggtgtggactcggctcactgcaacctctgtctcccaggttcaagcatttctcctgcctcagcctcccaagtagctgggattacaggcacctgccaccacacctggttaatttttgta-tttttagtagagacagggtttcactatgttggccaggctggtctcgaactcctga s panTro4.chr6 170741680 223 + 172623881 ttttgttt--ttttga----gatggagtct-aatctgttgctcagtctggagtgcagtggtgtggactcggctcactgcaacctctgtctcccaggttcaagcatttctcctgcctcagcctcccaagtagctgggattacaggcacctgccaccacacctggttaatttttgta-tttttagtagagacagggttttcctttgttggccaggctggtctcgaactcctga i panTro4.chr6 M 947 C 0 s nomLeu3.chr3 156358045 224 + 157873769 gtttgttttgttttga----gatggattctcgctccgttgctcaggctggagtgcagtggtgtggactcggctcactgcaacctctgtctcccaggttcaagcatttctcctgcctcagcctcccaagttgctgggattacaggcagctgccaccacacctggttaatttttgta-tttttagtagagaca--gtttcactatgttggccaggctggtctcgaactcctga i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168174835 226 + 169853907 gtttattt-attttga----gtctgattcttgctctgtcgctcaggctggagtgcagtggtgtggactcggctcactgcaacctctgtctcccaggttcaagcatttctcctgcctcagcctgccgagtaactgggattacaggcacccaccaataaacctggttaatttttgtattttttagtagagacaggttttcactatgttggccaggctggtctcgaactcctga i rheMac3.chr4 I 4 C 0 s macFas5.chr4 169128795 226 - 170955103 gtttattt-attttga----gtctgattcttgctctgtcgctcaggctggagtgcagtggtgtggactcggctcactgcaacctctgtctcccaggttcaagcatttctcctgcctcagcctgccgagtaactgggattacaggcacccaccactaaacctggttaatttttgtattttttagtagagacaggttttcactatgttggccaggctggtctcgaactcctga i macFas5.chr4 I 4 C 0 s papAnu2.chr4 163945938 226 + 165299245 gtttattt-attttga----gtccgATTcctgctctgtcgctcaggctggagtacagtggtgtggactcggctcactgcaacctctgtctcccaggttcaagcatttctcctgcctcagcctgccgagtaactgggattacaggcacccaccactaaacctggttaatttttgtattttttagtagagacaggttttcactatgttggccaggctggtctcgaactcctga i papAnu2.chr4 I 4 C 0 s chlSab2.chr13 96731471 225 + 98384682 gtttattt-attttga----gtccgattctcgctctgtcgatcaggctggagtgcagtggtgtggactcgactcactgcaacctctgtctcccaggttcaagcatttctcctgcctcagcctgccaagtaactgggattacaggcacccaccaccaaacctggttaatttttgta-tttttagtagagacaggttttcactatgttggccaggctggtctcgaactcctga i chlSab2.chr13 I 4 C 0 s calJac3.chr4 169939020 228 + 171630274 -ttttttt-tttttgagatggttggattcttgctctgtcactcaggctggagtacaatggcatggacttggctcactgcaacctttgcctcccgggttcaagcgtttctcctgcctcagcctcccgagtagttgggattacaggcctgtaccaccatgcctggctaagttttgca-ttttcaggagagataggttttcactgtgttggccaggctggtcttgaactcctga i calJac3.chr4 C 0 C 0 e canFam3.chr1 56213917 23 + 122678785 I e ponAbe2.chr6 172498081 1336 + 174210431 M a score=2399520.000000 s hg38.chr6_KB021644v2_alt 152308 1077 + 185823 AATGAGATAGA-TTTTAAATGTTGTATATTGCAAGAGAgcagtgagaggcagtgagagactgggggtggg---------cagg------------agacaagtgtgagtttgcagccgagctcccaggcgccaccactgtagagatgcaggcaggtcgtgtgtctctctgaacctcagttttatcatcagtaaaaat----gaggatgatcctgctcctccctggactcctggtgagggctgtaatgattatataaaatgaAGAGGGAGTGTGTCCCTGTATGAGGCATCAGGAGCCAGTGTGGCCTCCCTGGCAGCTTCTC-TCTGCCATGGGCCCTGCCTTGCTGTGGCTTCTCAGCCACCCTACGATGGATGGGACAG----GGTGGGCCA------------------GACCATCT-AGTCATATTTCTCCCAAAAG-CTTCTTAGTTGGAGTG-GTATTTTGCAACTGTAGAAGAAGTGGAAAAGATAAGTTATGGATTAATTTAGAAACGGCCAGATATGGTCCCAT-TTTT---TGTGTGTTTTGTCATGCATCGAATGAGACATAAGTAGTGATTTGAAGAATACGCTGTTTAAAACTGGCTTCGGGCAGGAGATGGGGGAGG--GGGTGTCCTGACAGCCCAGCCTTAAGGGAACTGTTCACTGAAGCTAAATTATCAGTGAGATAACTCACCAGAGGCCCCCACTGTCTGCCCT-GGGATG-TCTGT-TTtaggatggacagacttggccaacatgcaa--------------acaaaacagggcacctcattaaactcaaatatcacacaagcaagggatattcttttagtgtcattatatgccatgaaatgtttgggacatacttatgctaa-aaaaaaattacagtctaccctcaattgaaattcagct-tgtgtcctgtattttatgtggcaa----------tccCTGAGCTGACC-------TGCTGGGTCCATAGAGGGCAGCCTGGCTCATCCTGAAGGCTTGAGGTGTCCCCGT--AAGCTGTGCAGAGCTCTGATTTCCTGATAAAGTCACCATTTCT----------------GGTACTG---CAGGGGTGACAATGTGTTCTACAAGAAATTTTAAATTCATTTCAAAAATTATCTAACAAAATTAATCTAAGAAATCCCACAATACCTG s panTro4.chr6 170741903 1084 + 172623881 AATGAGATAGA-TTTTAAATGTTGTATATTGCAAGAGAgcagtgagaggcagtgagagactgggggtggggggggggggcagg------------agacaagtgtgagtttgcagccgagctcccaggcaccaccactgtagagatgcaggcaggtcgtgtgtctctctgaacctcagttttatcatcagtaaaaat----gaggatgatcctgctcctccctggactcctggtgagggctgtaatgattgtataaaatgaAGAGGGAGCGTGTCCCTGTACGAGGCATCAGGAGCCAGTGTGGCCTCCCTGGAAGCTTCTC-TCTGCCATGGGCCCTGCCTTGCTGTGGCTTCTCAGCCACCCTACGATGGATGGGACAG----GGTGGACCA------------------GACCATAT-AGTCATATTTCTCCCAAAAG-CTTCTTAGTTGGAGTA-GTATTTTGCAACTGTAGAAGAAGTGGAAAAGATAAGTTATGGATTAATTTAGAAACGGCCAGATATGGTCCCAT-TTTT---TGTGTGTTTTGTCGTGCATCAAATGAGACATAAGTAGTGATTTGAAGAATACGCTGTTTAAAACCGGCTTCAGGCAGGAGATGGGGGAGG--GGGTGTCCTGACAGCCCAGCCTTAAGGGAACTGTTCACTGAAGCCAAATTATCAGTGAGATAACTCACCAGAGGCCCCCACTGTCTGCCCT-GGGATG-TCTGT-TTtaggatggacagacttggccaacacgcaa--------------acaaaacagggcacctcattaaactcaaatatcacacaagcaagggatattcttttagtgtcattatatgccatgaaatgtttgggacatacttatgctaa-aaaaaaattacagtctaccctcaattgaaattcagct-tgtgtcctgtattttatgtggcaa----------tccCTGAGCTGACC-------TGCTGG-TCCATAGAGGGCAGCCTGGGTCATCCTGAAGGCTTGAGGTGTCCCCGT--AAGCTGTGCAGAGCTCCGATTTCCTGATAAAGTCACCATTTCT----------------GGTACTG---CAGGGGTGATAATGTGTTTTACAAGAAATTTTAAAT-CATTTCAAAAATTATCTAACAAAATTAATCTAAGAAATCCCACAATACCTG i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156358269 1089 + 157873769 AATTAGATAGATTTTTAAATGTTGTATATTGTAagagagcagtaagaggcagtgagagacttggggag-----------cagg------------agacaagtgtgagtttgcagctgagctcccaggcgccaccgctgtagagatgcaggcaggtcgtgtgtctctctgaacctcagttttatcatcagtaaaaac----gagggtgatcctgcttctccctggactcctggtgaggGCTGTAATTATTATATAAAATGAAGAGGGAGTGTGTCCCTGTACGAGGCATCAGAAGCCAGTGTGGCCTCCCTGGCAGCCTCTC-TCTGCCATGGGCCCTGCCTTGCTGTGGCTTCTCAGCCACCCTACGATGGATGGGACAG----GGTGGACCAGAGCTTCTCGCAACAAGGGAACATCT-ACTCATATTTCTCCCAAAAG-CTTCTTAGTTGGAGCA-GTATTTTGCAACTGT---AGAAGTGGAAAAGATAAGTTATGGATTAATTTAGAAATGGCCAGATATGGTCCCAT-TTTT---TGTGTGTTTTGTCATGCATCGAATGAGACATAAGTAGTGATTTGAAGAATATGCTGTTTAAAACTGGCTTCGGGCAGGAGATGGGGGAGG--GGGTGTCCTGACAGCCAAGCCTTAAGGGAATTGTTCACTGAAGCTAAATTATCAGTGAGATAACTCACCAGAGGCCCCCACTGTCTGCCCT-GGGATG-TCTGTAGCtaggattgacagacttggccaacacgcaa--------------acaaaacaggacacctcattaaactcaaatatcagacaagcaagggatattcttttagtgtcattatgtccaatgaaatgtttgggacatacttatgctaa-aaaaaaattacagtctaccctcaattgaaattcaact-ggtgtcctgtattttatgtggcaa----------tccCTGAGCAGACC-------TGCTGG-TCCATAGAGGTCAGTCTGGCTCATCCTGAACGTTT--GGTGTCCCTGT--AAGCTGTGCAGAGCTCTGATTTCCTGATAAAGTCACCATTTCT----------------GGTACTG---CAGGGGTGATAATGTGTCCTACAAGAAATTTTAAATTCATTTCAAAAATTATCTAACAAAATTAATCTAAGAAATCCCACAATACCTG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168175061 1082 + 169853907 AATGAGATCGA-TTTTAAATGTTGTATATTGCAAGAGA----------GCAGTGAGAGACCAGGGGGCC----------CGGG------------AGACCAGTGTGAGTTTGCAGCTGAGCTCCCAGGAGCCACCGCTGCAGAGATGCAggcaggtcttgtgtctctct-aacctcagttttttaatccgtaaaaat----gagggtggtcctgctcctccctggactcctggtgagggctgtaatgattacataaaatCACGAGGGAGCGTGTCCCTGTGTGGGGCATCAGGAGCCTGTCTGGCCTCCCTGGCGGCTTCTC-TCTGCTGTGGCCCCTGCCTTGCTGTGGCTTCTCAGTCACCTTACCATGGATGAGACAG----GGTGAGCCAGAGCTTCTCGCAACAAGGAACCATCC-ACTCATATTTCTCCCAAAAG-CTTCTTAGTTGGAGCA-GTGTTTTGCAACTGTAGAAGAAGTGGAAAAGATAAGTTATGGATTAATTTAGAGACGGCCAGATATGGTCCCAT-TTTTGTGTGTGTGTTTTGTCATGCATTGAATGAGACATAAGTAGTGATTTGAAGAATATACTGTTTAAAACTGGCTTCAGGCAGGAGATGGCGGAGG--GGGTGTCCTGACAGCCAAGCCTTAAGGGAATTGTTCACTGAAGCTAAATAATCA-TGAGGTAACTCACCAGAGGCTTCCGCTGTCTGCCCT-GGGATG-TCTGTAGCtaggattgacagacttggccaacatgcaa--------------acgaaacaggacaccttgttaaactcaaatatcagataagcaagggatactcttttagtgtcattatatcccatgaaatgtttgggacatacttacgct---aaaaaaattacagtctacactcaattgaagttcagct-ggtatcctgtattgcatatggcaa----------tccCTGAGCAGAAC-------TGCTGG-TCCATAGAGGGCACCCTGGCTCATCCTGCAGGCTTGAGGTGTCCC-GT--AAGCTGTGCAGAGCTCTGATTTCCAGATAAAGTCACCATTTCT----------------AGTACTG---CAGGGGTGATCATGTGTTCTACAAGACATTTTCAATTCATTTCAAAAATTATCTAACAAAATTAGTCTAAGAAATCCCACAATACCTG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169129021 1082 - 170955103 AATGAGATCGA-TTTTAAATGTTGTATATTGCAAGAGA----------GCAGTGAGAGACCAGGGGGCC----------CGGG------------AGACCAGTGTGAGTTTGCAGCTGAGCTCCCAGGAGCCACCGCTGCAGAGATGCAGGCAGGTCTTGTGTctctct-aacctcagttttttaatccgtaaaaat----gagggtggtcctgctcctccctggactcctggtgagggctgtaatgattacataaaatCACGAGGGAGCGTGTCCCTGTGTGGGGCATCAGGAGCCTGTCTGGCCTCCCTGGCGGCTTCTC-TCTGCTGTGGCCCCTGCCTTGCTGTGGCTTCTCAGTCACCTTACCATGGATGAGACAG----GGTGAGCCAGAGCTTCTCGCAACAAGGAACCATCC-ACTCATATTTCTCCCAAAAG-CTTCTTAGTTGGAGCA-GTGTTTTGCAACTGTAGAAGAAGTGGAAAAGATAAGTTATGGATTAATTTAGAGACGGCCAGATATGGTCCCAT-TTTTGTGTGTGTGTTTTGTCATGCATTGAATGAGACATAAGTAGTGATTTGAAGAATATACTGTTTAAAACTGGCTTCAGGCAGGAGATGGCGGAGG--GGGTGTCCTGACAGCCAAGCCTTAAGGGAATTGTTCACTGAAGCTAAATAATCA-TGAGGTAACTCACCAGAGGCTCCCGCTGTCTGCCCT-GGGATG-TCTGTAGCtaggattgacagacttggccaacatgcaa--------------acgaaacaggacaccttgttaaactcaaatatcagaaaagcaagggatactcttttagtgtcattatatcccatgaaatgtttgggacatacttacgct---aaaaaaattacagtctacactcaattgaagttcagct-ggtatcctgtattgcatatggcaa----------tccCTGAGCAGAAC-------TGCTGG-TCCATAGAGGGCACCCTGGCTCATCCTGCAGGCTTGAGGTGTCCC-GT--AAGCTGTGCAGAGCTCTGATTTCCAGATAAAGTCACCATTTCT----------------AGTACTG---CAGGGGTGATCATGTGTTCTACAAGACATTTTCAATTCATTTCAAAAATTATCTAACAAAATTAGTCTAAGAAATCCCACAATACCTG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163946164 1081 + 165299245 aatGAGATCGA-TTTTAAATGTTGTATATTGCAAGAGA----------GCAGTGAGAGACCAGGGGGCC----------CGGG------------AGACCAGTGTGAGTTTGCAGCCGAGCTCCCAGGAGCCACCGCTGTAGAGATGCAGGCAGGTCTTGtgtctctctgaacctcagttttttaaTCAGTAAAAAT----GAGGGTGGTCCTGCTCCTCCCTGGACTCCTGGTGAGGGCTGTAATGATTACATAAAATCACGAGGGAGCGTGTCCCTGTGTGAGGCATCAGGAGCCTGTCTGGCCTCCCTGGCGGCTTCTC-TCTGCTGTGGGCCCTGCCTTGCTGTGGCTTCTCAGTCACCCTACCATGGATGGGACAG----GGTGAGCCAGAGCTTCTTGCAACAAGAAACCATCC-ACTCATAGTTCTCCCAAAAG-CTTCTTAGTTGGAGCA-GTATTTTGCAACTGT---AGAAGTGGAAAAGATAAGTTATGGATTAATTTAGAGACGGCCAGATATGGtcccat-ttttgtgtgtgtgttttgtcatGCATTGAATGAGACATAAGTAGTGATTTGAAGAATATGCTGTTTAAAATGGGCTTCAGGCAGGTGATGGGGGAGG--GGGTGTCCTGACAGCCAAGCCTTAAGGGAATTGTTCACTGAAGCTAAATAATCA-TGAGATAAGTCACCAGAGGCCCCCGCTGTCTGCCCT-GGGATG-TCTGTAGTTAGGATTGACAGACTTGGCCAACATGCAA--------------ACGAAGCAGGACACCTTGTTAAACTCAAATATCAGATAAGCAAGGGATACTCTTTTAGTGTCATTATATCCCATGAAATGTTTGGGACATACTtatgct-a-aaaaaaattacagtctaCCCTCAATTGAAATTCAACT-GGTGTCCTGTATTTTATGTGGCAA----------TCCCTGAGCAGACC-------TGCTGG-TCCATAGAGGGCACCCTGGCTCATCCTGCAGTCTTGAGGTGTCCC-GT--AAGCTGTGCAGAGCTCTGATTTCCAGATAAAGTCACCATTTCT----------------GGTACTG---CAGGGGTGATCATGTGttctacaagaaattttaaattcatttcaaaaattatCTAACAAAATTAGTCTAAGAAATCCCACAATACCTG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96731696 1094 + 98384682 AATGAGATTGA-TTTTAAATGTTGTATATTGCAAGAGAGCAGTGAGAGGCAGTGAGAGACCAGGGGGCC----------CGGG------------AGACCAGTGTGAGTTTGCAGCCGAGCTCCCAGGAGCCACCGCTGCAGAGATGCAGGCAGGCCTTGTGTctctctgaacctcagttttttaatcagtaaaaat----gagggtggtcctgctcctccctggactcctggtgagggctgtaatgattacataaaatCACGAGGGAGCGTGTCCCTGTGTGAGGCACCAGGAGCCCGTCTGGCCTCCCTGGCAGCTTCTC-TGTGCCATGGGCCCTGCCTTGCTGTGGCTTCTCAGTCACCCTACCATGGATGGGACAG----GGTGAGCCAGAGCTTCTCGCAACAAGGAACCATCC-ACTCATATTTCTCCCAAAAG-CTTCTTAGTTGGAGCA-GGATTTTGCAATAGTAAAAGAAATGGGAAAGATAAGTTATGGATTAATTTAGAGACGGCCAAATATGGTCCCAT-TTTTGTGTGTGTGTTTTGTCATGCATTGAATGAGACATAAGTAGTGATTTGAAGAATATGCTGTTTAAAACTGGCTTCAGGCAGGAGATGGCGGAGG--GGGTGTCCTGACAGCCAAGCCTTAAGGGAATTGTTCACTGAAGCTAAATAATCG-TGAGATAACTCACCAGAGGCCCCCTCTGTCTGCCCT-GGGATG-TCTGTAGCtaggattgacagacttggccaacatgcaa--------------acgaaacaggacaccttgttaagctcaaatatcagataagcaagggatactcttttagtgtcattatatcccaggaaatgtttgggacatacttatgct-a-aaaaaaattacagtctaccctcaattgaaattcaact-ggtgtcctgtattttatgtggcaa----------tccCTGAGCAGACC-------TGCTGG-TCCATAGAGGGCACCCTGGTTCATCTTGCAGGCTTGAGGTGTCCC-GT--AAGCTGTGCAGAGCTCTGATTTCCAGATAAAGTCACCATTTCT----------------AGTACTG---CAGGGGTGATCATGTGTTCTACAAGAAATTTTAAATTCATTTCAAAAATTATCTAACAAAATTAGTCTAAGAAATCCCACAATACCTG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169939248 1011 + 171630274 AATGAGGTAGA-TTTTAAGTGCTGCGTATTACAAGAGAGCAGTGAGGTCCAGTGAGAGACCAGGGGG------------CAGG------------AGACGTGTGTGACTTTGAAGCGGCGCTCCCAGGCACC-------------TGCAGGCAGGTGGTGTCTTtctttgaacctcaattttttcttcagtaaaaat----gaggatgaccctgatccttcctggactcatggtgagggctataatgattatgtaaaATCAAGAGGGCATGTGCCCCTGTATGAGGCAGCAGGAGCCAGTCCGGCCTTCCTGGCGGCTTCTC-TCTGCTGTGGGCTCTGCCTTGCTGTGGCTTCTCAGCCACCCCATGATGGATGAGACAG----CGTGGACCGGAGCTTCTCGCAACAAGACACCATCT-ACTCATTTCTC-CCCAAGGG-CTTCTTGGTTGGAACT-GTATTTTGCAACTGT---GGAAGTGGG-AAGAGAAGTTACGGA-TAACTTAGGAATGGCCAGATATGGTCCCTTATTTT---TTTGTCTTTTGGCATGAATCAAATGAGACATGATTCATGATTTGAAGAACACGCTGTTTAAAACTGTTGTTGGGCTTGAGGCAGGGGAAGGTGGGTGTCCTGACATCC-AGCCCTAAGGGATTCTTTCACTGATGCTCAAGTATCAGTGAGGTAGCTCGCCAGAGGCCCCCACTGCCTCCCCT-GAGATG-CCTGTAGCTA-----GACAGACCTGGCCAACATGCAA--------------ACAAAACAGGACACCCTGTTACACTCAAACATCAAATAGGTAATAAA------------------ACAGCCCATGAAATGTTTGGGACATTCTTATGCTGA-AAAGAAAATACCATCTACCCTCAACTGAAATTCCACT-GGTG----------------------------------------------------------TCCACGGAGGGCTGCCTGGCTCATCCTGAAGGCCCGAGGTGTCGCCGT--AAGCTGTGCAGAGCTCTGATTTCCTGATAAAGTCACCGTTTCT----------------GGTATTG---CAGAGGCGATCGTGTGTTCCACAAGAAATTTTAAATTCATTT-AAAAATGATCTGGCAAAATGAGTCTGAGAAATCCCACAATACCTG i calJac3.chr4 C 0 C 0 s canFam3.chr1 56213940 1115 + 122678785 AATAAAGTAGA-TTTTAAATTTTACATCTTGAGCAGGC----------TCAGCCTGAAACCAGGAAGGA----------TGGTGAGGTTTGGCTCAGAGGTGTGTGCGTGTGCAGCC-AGCCCCAAG---CCATCGCTC------TTCACGCAGGCTG-----CTCTCT--------GTTATTCAATCAGCAAGAATGGGGGGGGGGGGTGCAGGT-CTCCTTGAACCTGTGGTGACAGTT-------TTGCACAACTAAAAGTGGGGCTG----CTCACACGAGGAGTCTCATCTTTGCACAGCTTTTGCAAAGGCTTTTCTTCCATGGAGGGCACACCTTTGGTATG---CATCAGCCACC-TGCCGTGGATGGAGTGGCAGAGGTGTGGTCATGGGACTTCCTAGAATCCACCACCTGACTCCCAGCTCTTCCAAAGGACTTCTGAGTTGGGACATTTATTTTACACCCACAGAAGGAATGGGAAAGATAAACTATGGACCAACGAAGCAATGCCCAGCCATGGCCCCTT-ATTTTAGCTTGTGCTGTGGCAAACATTAAACAAGACCCAAGTAGTG--TTGAAGAACTTACTCTTCAAAACTGCTTT--GGCACGAGACAAGGGAAGATGTGTACACTAATGTTCTAGGCTAATGGGATTTTTCCATTTCAGTTACATTATTGGTCAGATGGTCGACCAGTTTCTTCCCACGCTGACCCTAGAGGTACTCTGCACCTgggtctgccagatttaacaagcaggtcagcaaacacaaacttacaaaaccaagtacccagttcaacccgaatatca-ataaacattgaataactttttagtataagtatgtcccatgcaaggattggggcatacttggagtaacgaaaaacatattgtttacctacaagtagcatttaaccgggtgtcctgtattttacctggcaaatctaTCTCCATCCCAAGTAGTCCTCTGCGGTTCTGG-TTCATGGAGCACAGCTCAGCTCATCCTCAAGGCTGACGGTGGTGCCATTCCATCTATATG-----CTGATTCCC----AAAGTCTACATTTCTCAAACAAAGAGCCAAGAATATTGCCTCAGGGGTGATCACCTATTTTATAAGAATTTTTAAGTTGACTTCCAAGATTATTTAATGAAATTAGTCTAA-AAATTCTGAAACACCTA i canFam3.chr1 I 23 C 0 e ponAbe2.chr6 172498081 1336 + 174210431 M a score=251509.000000 s hg38.chr6_KB021644v2_alt 153385 95 + 185823 CATGACCACAGATAACCAAGTAATCCCATTAC--AATGACATGGCGTCCTTGTTCAGCAGGCGTTTCTTTTTGTGTTTCTCATTAAATGATCA-------------GCAA s panTro4.chr6 170742987 95 + 172623881 CATGACCACAGATAACCAAGTAATCCCATTAC--AATGACATGGCGTCCTTGTTCAGCAGGCGTTTCTTTTTGTGTTTCTCATTAAATGATCA-------------GCAA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172499417 95 + 174210431 CATGACCACAGATAACCAAGTAATCCCATTAC--AATGACGTGGCGTCCTTGTTCAGCAGGTGTTTCTTTTTGTGTTTCTCATGAAATGATCA-------------GCAA i ponAbe2.chr6 M 1336 C 0 s nomLeu3.chr3 156359358 95 + 157873769 CATGACCACAGATAACCAAGTAATCCCATTAC--AGTGGCATGGCGTCTTTGTTCAGCAGGCGTTTCTTTTTGTGTTTCTCCTGAAATGATCA-------------GCAA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168176143 107 + 169853907 CATGACCACAGATAACGAAGTAATTCCATTAC--AATGACATGGCATCCTTGTTCAGC-GGCGTTTCTTTTTGTGTTTCTCATTAAATAATCATGATCGCCTCATGAAAA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169130103 107 - 170955103 CATGACCACAGATAACGAAGTAATTCCATTAC--AATGACATGGCATCCTTGTTCAGC-GGCGTTTCTTTTTGTGTTTCTCATTAAATAATCATGATCGCCTCATGAAAA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163947245 107 + 165299245 CATGACCACAGATAACGAAGTAATTCCATTAC--AATGACATGGCATCCTTGTTCAGC-GGCgtttctttttgtgtttctcATTAAATAATCATGATCGCCTCATGAAAA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96732790 107 + 98384682 TATGACCACAGATAACGAAGTAATTCCATTAC--AATGACATGGCATCCTTGTTCAGC-AGCGTTTCTTTTTATGTTTCTCATGAAATAATCACGATCGCCTCATGAAAA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169940259 84 + 171630274 AATGACCACAGAAAACCAAGTGA-------------TGTGGTGGCATCCTTGTTCAGCAGGCGTTTCTTTTCGTGTTTCTCCTGAAATTATCC-------------GCCA i calJac3.chr4 C 0 C 0 s canFam3.chr1 56215055 83 + 122678785 TGTGACCAC--------------TTGTATCACTTAATGCCATGGCATCATTGATCAGTTTGCATCGCTTCTTGTATTTGTCATCAGATTGATG-------------GCAA i canFam3.chr1 C 0 I 982 a score=19904.000000 s hg38.chr6_KB021644v2_alt 153480 6 + 185823 GTGAGG s panTro4.chr6 170743082 6 + 172623881 GTGAGG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172499512 6 + 174210431 GTGAGG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156359453 6 + 157873769 GTGAGG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168176250 6 + 169853907 GTGAGG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169130210 6 - 170955103 GTGAGG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163947352 6 + 165299245 GTGAGG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96732897 6 + 98384682 GTGAGG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169940343 6 + 171630274 GTGAGA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56215138 982 + 122678785 I a score=14003.000000 s hg38.chr6_KB021644v2_alt 153486 5 + 185823 TGACT s panTro4.chr6 170743088 5 + 172623881 TGACT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172499518 5 + 174210431 CGACT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156359459 5 + 157873769 CGACT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168176256 5 + 169853907 CTACT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169130216 5 - 170955103 CGACT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163947358 5 + 165299245 Cgact i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96732903 5 + 98384682 CGACT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169940349 5 + 171630274 CAACT i calJac3.chr4 C 0 I 2184 s canFam3.chr1 56216120 5 + 122678785 TGACA i canFam3.chr1 I 982 C 0 a score=2332692.000000 s hg38.chr6_KB021644v2_alt 153491 764 + 185823 -TTTAAAAAACAATTACAAAGC--TTTTTCCCCCAATTTTCAAATCTAGCTAGATGAATTTAGTTTGTATTTTTAAA-TGTT-----AAAAAGCAAGTTCAGATCAGTTCATCCATTTCTTCAAACCATGACTGTAAAGAAAACCGGCAGAAATTAAGCCACAGAAATGTGTTAAAGTACATTGCAGATGGGACTTGAACCCACAGTCCAGGAAACTTGGGTTTGAGG-TAAAACCTCGTCTT-AGCA-----TATCTTGTACCTTGCTCTCATGCTGTATCTACTTTCATTTGCGTGTTCAAATTACAGTG-TTCTAGTACACTCTGAAAGTGTTAATTTTCATGCTACAGTGGTTGC--TTTCCACACAGCGACCTGAGGTTTTGGTTGAGTACAGTTAACGTGGTTGTAAAAACGTCTGATTAAACTCTCCTGACAACCGACC--TTGCAACAAAAGTCATACAAA----GACAGTGTGTTTTCAGCTTTTACGCTGTGTAAACTTACAAGTGA-GACCTTTTCTGAAACTATTTTTTTTGATTAACAAATG------TTTTGAA--AAAGAGTTTTTAGAAACTTCATAAAATTAATCTTCTAGAAACCATAAGGC-ATTTTTGTTTACTTGAGAAGACCAGAGGTTGATGGTGCAGGTCCCTCCAGTGGCCCGAGGATCTCAGTGTTCTGGGCTATTGACTCTGCACTTTCCCTCGCCTTACCCTGTTGGTGGCAAGACAGCTGCTGGAGCACCAGGCGTCAAGTCCTT-CTGCCTGCACTCT-GGCAGAAAAGAC s panTro4.chr6 170743093 765 + 172623881 -TTTAAAAAACAATTACAAAGC--TTTTTCCCCCAATTTTCAAATCTAGCTAGATGAACTTAGTTTGTATTTTTAAA-TGTT-----AAAAAGCAAGTTCAGATCAGTTCATCCATTTCTTCAAACCATGACTGTAAAGAAAACCAGCAGAAATTAAGCCACAGAAATGTGTTAAAGTACATTGCAGATGGGACTTGAACCCACAGTCCAGGAAACTTGGGTTTGAGGCTAAAACCTCGTCTT-AGCA-----TATCTTGTACCTTGCTCTCATGCTGTATCTACTTTCATTTGCGTGTTCAAATTACAGTG-TTCTAGTACACTCTGAAAGTGTTAATTTTCATGCTACAGTGGTTGC--TTTCCACACAGCGACCTGAGGTTTTGGTTGAGGACAGTTAATGTGGTTGTAAAAACGTCTGATTAAACTCTCCTGACAACCGACC--TTGCAACAAAAGTCATACAAA----GACAGTGTGTTTTCAGCTTTTATGCTGTGTAAACTTACAAGTGA-GACCTTTACTGAAACTATTTTTTTTGATTAACAAATG------TTTTGAA--AAAGAGTTTTTAGAAACTTCATAAAATTAATCTTCTAGAAACCATAAGGC-ATTTTTGTTTACTTGAGAAGACCAGAGGTTGATGGTTCAGGTCCCTCCAGTGGCCCGAGGATCTCAGTGTTCTGGGCTATTGACTCTGCACTTTCCCTCGCCTTACCCCGTTGGTGGCAAGACAGCTGCTGGAGCACCAGGCGTCAAGTCCTT-CTGCCTGCACCCT-GGCAGAAAAGAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172499523 764 + 174210431 -TTTAAAAAACAATTATAAAGC--TTTTTTCCCCAATTTGCAAATCTAGCTAGATGAATTTAATTTGTATTTTTAAA-TGTT-----AAAAAGCAAGTTCAGATCAGTTCATCCATTTCTTCAAACCATGACTGTAAAGAAAACCGGCAGAAATTAAGCCACAGAAATGTGTTAAAGTACATTGCAGATGTGACTTGAACCCGCAGTCCAGGAAACTTGGGTTTGAGGCTAAAACCTCGTCTT-AGCA-----TATCTTGTACCTTGCTCTCATGCTGTATCTACTTTCATTTGCATGTTCAAATTACAGTG-TTCTAGTACACTCTGAAAGTGTTAATTTTCATGATACAGTGGTTGC--TTTCCACACAGCGACCTGAGGTTTTGGTTGAGTACAGTTAACGTGGTTGTAAAAACGTCTGATTACACTCTCCTGACTACTGACC--TTGAAACAAAAGTCATACAAA----GACAGTGTGTTTTCAGCTTTTACACTATGTAAACTTACAAGTGA-GACCTTTTCTGAAACTA-TTTTTTTAATTAACAAACG------TTTTGAA--AAAGAGTTTTTAGAAACTTCATAAAATTAATCTTCTAGAAACCATAAGGC-ACTTTTGTTTACTTGAGAAGACCAGAGGTTGATGGTGCAGGTCCCTCCAGTGGCCCGAGGATCTCAGCGTTCTGGGCTATTGACTGTGCACTTTCCCTGGCCTTATCCCTTTGGTGGCAAGAGAGCTGCTGGAGCACCAGGCGTCAAGTCCTT-CTGCCTGCACCCT-GGCAGAAAAGAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156359464 759 + 157873769 -TTTAAAAAACAATTATAAAGCTTTTTTTTCCCCAATTTTCAAATCTAGCTAGATGAA-TTATTTTGTATTTTTAAA-TGTT-----AAAAAGCAAGTTCAGATCAGTTCATCCATTTCTTCAAACCATGACTGTAAAGAAAACTGGCAGAAATTAAGCCACAGAAATATATTAAAGTACATTGCAGATGTGACTTGAACCCACAGTCCAGGAAACTTGGGTTTGAGGCTAAAACCTCGTCTT-AGCA-----TATCTTGTACCTTGCTCTCACGCTGTATCTACTTTCATTTGCGTGTTCAAATTACAGCG-TTCTAGTACATTCTGAAAGTGTTAATTTTCATGCTACGGTGGTGGT--TTTCCACACAGCGACCTGAGGTTTTGGGTGAGTACAGTTAACGTGGTTGTAAAAACATCTGATTAAACTCTCCT-------GACC--TTGAAACAAAAGTCAGACAAA----CACAATGTGTTTTCAGCTTTTACACTGTGTAAACTTACAAGTGA-GACCTTTTTTGAAACTATTTTTTTAAATTAACAAATG------TTTTGAA--AAAGAGTTTTTAGAAACTTCATAAAATTAATCTTCTAGAAACCATAAGGC-TTTTTTGTTTACTTGAGAAGACCAGAGGTTGATGGTGCAGGTCCCTCCAGTGGCCCGAGGATCTCAGCGTTCTGGGCTATTGACTCTGCTCTTTCCCTGGCCTTACCCAGTCAGTGGCAAGACAGCTGCTGGAACACCAGGTGTCAAGTCCTT-CTGCGTGCACCCT-GGCAGGAAAGAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168176261 766 + 169853907 -TTTAAAACATAATTATAAAGC-TTTTCCCCCCCAATTTTCAAATCTAGCTAGACGAATTTAGTCTGTATTTTTAAA-TGTT----GAAAAAGCAAGTTCAGATCAGTTCATCCATTTCTTCAAACCATAACTGTAAAGAAAACCAGCAGAAATTAAGCCACAGAAATATGTTAAAGCACATTGCAGATGTGACTTGAACCCACAGTCCAGGAAACTTGGGTTTGAGGCTAAAACCTCCTCTT-AGCA-----TATCTTGTACCTTGCTCTCATGCTG-ATCTACTTTCATTTGAGTGTTCAAATTACAGCG-TTCTAGTACATTCTGAAAGTGTTAATTTTCATGCTACAGTGGTTGT--TTTCCACACAGCGAACTGAGGTTTTGGTTGAGTACAGTTAACGTGGTTGTAGAAAAGTCTGATTAAACTCTCATGACTACTGACC--TTGAAACAAAAGTCATACACA----GACCGTGCGCCTTCAGCTTTCACGCTGTGTAAACTTACAAGTCA-GACCTGTTTTGAAACTTTTTTTTTAAATTAACAAATG------TTTTGAA--AAAGAGTTTTTAGAAACTTCATAAAATTAATCTTCTGGAAACCATAAGGC-TTTTTTGATTTCTTGAGAAGACCAGAGGTTGATGGTGCAGGTTCCTCCAGTGGCCGGAGGATCTCAGCATTCTGGGCTATTGACTCTGCACTTTCCCTGGCCTTACCCTGTCGGTGGCAAAGCAGCTGCTGGAGCACCAGGCGTCAAGTCCTT-CTGCCTGCACCTT-GGCAGAAAAGAC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169130221 766 - 170955103 -TTTAAAACATAATTATAAAGC-TTTTTCCCCCCAATTTTCAAATCTAGCTAGACGAATTTAGTCTGTATTTTTAAA-TGTT----GAAAAAGCAAGTTCAGATCAGTTCATCCATTTCTTCAAACCATAACTGTAAAGAAAACCAGCAGAAATTAAGCCACAGAAATATGTTAAAGCACATTGCAGTTGTGACTTGAACCCACAGTCCAGGAAACTTGGGTTTGAGGCTAAAACCTCCTCTT-AGCA-----TATCTTGTACCTTGCTCTCATGCTG-ATCTACTTTCATTTGAGTGTTCAAATTACAGTG-TTCTAGTACATTCTGAAAGTGTTAATTTTCATGCTACAGTGGTTGT--TTTCCACACAGCGAACTGAGGTTTTGGTTGAGTACAGTTAACGTGGTTGTAGCAAAGTCTGATTAAACTCTCATGACTACTGACC--TTGAAACAAAAGTCATACAAA----GACCGTGCGTCTTCAGCTTTCACGCTGTGTAAACTTACAAGTCA-GACCTGTTTTGAAACTTTTTTTTTAAATTAACAAATG------TTTTGAA--AAAGAGTTTTTAGAAACTTCATAAAATTAATCTTCTGGAAACCATAAGGC-TTTTTTGATTTCTTGAGAAGACCAGAGGTTGATGGTGCGGGTTCCTCCAGTGGCCGGAGGATCTCAGCGTTCTGGGCTATTGACTCTGCACTTTCCCTGGCCTTACCCTGTCGGTGGCAAAGCAGCTGCTGGAGCACCAGGCGTCAAGTCCTT-CTGCCTGCACCCT-GGCAGAAAAGAC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163947363 766 + 165299245 -tttaaaacataattataaagt-tttttccccccaattttCAAATCTAGCTAGACGAATttagtctgtatttttaaa-tgtt----gaaaaagcAAGTTCAGATCAGTTCATCCATTTCTTCAAACCATAACTGTAAAGAAAACCAGCAGAAATTAAGCCACAGAAATATGTTAAAGCACATTGCAGATGTGACTTGAACCCACAGTCCAGGAAACTTGGGTTTGAGGCTAAAACCTCCTCTT-AGCA-----TATCTTGTACCTTGCTCTCATGCTG-ATCTACTTTCATTTGAGTGTTCAAATTACAGCG-TTCTAGTACATTCTGAAAGTGTTAATTTTCATGCTACAGTGGTTGT--TTTCCACACAGCGACCTGAGGTTTTGGTTGAGTACAGTTAACGTGGTTGTAGAAAAGTCTGATTAAACTCTCATGACTACTGACC--TTGAAACAAAAGTCATACAAA----CACCGTGCGTCTTCAGCTTTCACGCTGTGTAAACTTACAAGTCA-GACCTGTTTtgaaac-ttgtttttaaattaacaaatg------ttttgaa--aaagagTTTTTAGAAACTTCATAAAATTAATCTTCTGGAAACCATAAGGCtttttttGATTTCTTGAGAAGACCAGAGGTTGATGGTGCGGGTTCCTCCAGTGGCCTGAGGATCTCAGCGTTCTGGGCTATTGACTCTGCACTTTCCCTGGCCTTACCCCGTCGGTGGCAAAACAGTTGCTGGAGCACCAGGCGTCAAGTCCTT-CCGCCTGCACCCT-GGCAGAAAAGAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96732908 765 + 98384682 -TTTAAAACATAATTATAAGGC-TTTTTTCCCCCAATTTTCAAATCTAGCTAGACGAATTTAGTCTGTATTTTTAAA-TGTT----GAAAAAGCAAGTTCAAATCAGTTCATCCATTTCTTCAAACTGTGACTGTAAAGAAAACCAACAGAAAATAAGCCACAGAAATATGTTAAAGTACATTGCAGATGTGACTTGAACCCACAGTCCAGGAAACTTGGGTTTGAGGCTAAAACCTCCTCTT-AGCA-----TATCTTGTACCTTGCTCTCATGCGGTATCTACTTTCATTTGAGTGTTCAAATTACAGCG-TTCTGGTACATTCTG--AGTGTTAATTTTCATGCTACAGTGGTTGC--TTTCCACACAGCAGCCTGAGGTTTCGGTTGAGTACAGTTAACGTGGTTGTAGAAAAGTCTGATTAAACTCTCATGACTACTGACC--TTGAAACAAAAGTCATACAAA----GACCGTGCGTCTTCAGCTTTCACGCTGTGTGAACTTACAAGTCA-GACCTGTTTTGAAAC-TTTTTTTTAAATTAACAAATG------TTTTGAA--AAAGAGTTTTTAGAAACTTCATAAAATTAATCTTCTGGAAACCATAAGGCTTTTTTTGATTTCTTGAGAAGACCAGAGGGTGATGGTGCGGGTTCCTCCAGTGGCCGGAGGATCTCAGCGTTATGGGCTATTGTCTCTGCACTTTCTCTGGCCTTAGCCCGTCGGTGGCAAAACAGCTGCTGGAGCACCAGGCATCAAGTCCTT-CCACCTGCACCCT-GGCAGAAAAGAC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169942538 714 + 171630274 -TTTAAAAAGGAATTACAAAGC-TCTTTTCCCCCAATTTTCAAATCTGGCTAGATGAATTTAGTTTGTATTTTTAAA-TGTT----AAAAAAGCAGGTTCAGATCAGTTCATCCATTTCTTCAAACCATGACTCTGAAGAAAA---------------CCACAGAAATATGTTAAAGCGCATTGCAGATGTGACTTGAGGCCACAGACCAGGAAACTTGGATTTGAGGCTGAAACCTCCTCCG-AGCA-----TATCTTGTACCTTGCTCTCGGGCTACATCCACTTTCATTTG-GTGTT-AAATTACACTG-TTCTAGTACATTTTTAAAGTGTTAATTTTAATGCTACAGCAGTTGT--TTTCCACACAGCGACCTAAGGTTTTGGTTGA--ATCGTTAATGTGGTTGTACAGAAGTCTGATTAAACCCTCCTGAC------------GAAGCAA---TCATACACAGATCGACAGTGTGCTTTCAGCTTTCACGCTGGGTCAGCTTACCAGTGA-GACCTTGTTTGAAACCATTTTTTTGAATTAAGAA--------------------------CTTTGAAATGTCATAAAATTAA---TCTAGGAACCATAAGGCTTTTCTCGTTTTCTTGAGAAAACCACAGGTTGATGGTGCAGGTCCCGCCGGTGGCCCGAGGATCTCAACGTTCTGGGCTGTCGACTCTGCCCTTTCCCTGGCCTCACCCAGTCAGTGGCAGCACAGCTGCT-GAGCACCAGGCGTCGAGTCCTT-CTGCC-ACACCCT-G---AAGAAGAC i calJac3.chr4 I 2184 I 5 s canFam3.chr1 56216125 779 + 122678785 TTAAAAAAAAAAGTTATAAAGCCTATTTTTTTCTGACTTTCAAATGTAGCTGGAAAATTTTGGAACCCTTCTTTAAACTGTTCAAAAAAAAAGCAAGTTCAGATCAGTTCATCCACTTCTTCAAAACAGGATTATAAAGCAAACCAAAGGAAATTAAACCACAGAAATGTGTTAAAGTGCACTGCAGATGTGACTGGAACCCACGGGCGTGGAAGCTTGGATTGGGGGTTGAAACCCCATCCTCAGCACCAGGCATCTTGAACGTGACCCTGAGACCCTATCGCTTGCTCTTTG--CGTTTAAATTACATCGATTCCAGCACTTCTGTGAACGGTTAACTTTAATGATACGGTGGTTGTGCTTTCAGCAGAGCCATCGAGGTTTTTGGTTGAACATGGTTAATATGGTTGTAAAGA-GTTTTATTAACCTCTTTTGACGACTGGCTTATTTGAACGAAAGTTAGATAAG----TACAGACTGTGTTCAGCTGTCACACTAAGTAAACTCTCAAGTGAGGACATTTTCCGGaat-tttttttttaattaaaaagtaatttttttttaaattaaaaaGT-----AATACTTCATGAAAATGATCTTTTTTAAATCAAAAGGCATTTTTTATTTACTC---AAGACTGAAGACTGGGGACCCGGGTCCCCTCGGTGGCCCTGTGGCGGCCCAGTTCTGGGCTA--GCCACTGCAGTTTCTGTGGCCTTACCCCAACGG-GTAGAGACAGCGGCCAGACCA-GAGGCACCAAGCCCTCACGGCCTTAGCTCTAGGCAGGAGGG-- i canFam3.chr1 C 0 C 0 a score=391382.000000 s hg38.chr6_KB021644v2_alt 154255 157 + 185823 AAGTCAGAGGAAGACATAT----TTCCCACAGAATTAAAATG----ACATGGCAGAAGATCTTTCCCGTAAGCCC-AGTAATGAGCCTGGCCTCCGCCCTTCACCCG-GTGCTCCGTATTTT--GAGTCTACTT-GTAATCAGATTTGGAGCTTCCGAGGGCTGCAGATT s panTro4.chr6 170743858 157 + 172623881 AAGTCAGAGGAAGACATAT----TTCCCACAGAATTAAAATG----ACATGGCAGAAGATCTTTCCCGTAAGCCC-AGTAATGAGCCTGGTCTCTGCCCTTCACCCG-GTGCTCCGTATTTT--GAGTCTACTT-GTAATcagatttggagcttccgagggctgcagatt i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172500287 157 + 174210431 AAGTCAGAGGAAGACACAT----TTCCCACAGAATTAAAATG----ACATGGCAGAAGATCTTTCCCGTAAGCCC-AGTAATGAGCCTGGCCTCCACCTTTCACCCG-GTGCTCCATATTTT--GAGTCTACTT-GTAATCAGATTTGGAGCTTCTGAGGGCTGCAGATT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156360223 157 + 157873769 AAGTCAGAGGAAGACGCAT----TTCCCACAGAATTAAAATG----ACATGGCAGACAATCTTTCCTGTAAGCCC-AGTAATGAGCCTGGCCTCCACCCCTCACCCG-GTGCTCTGTATTTT--CATTCTCCTT-GTAATTggatctggagcttccaagggctgcaggtt i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168177027 158 + 169853907 AAGTCAGAGGAAGACACAT----TTCCCACAGAATTAAAATG----ACATGGCAGAAGATCTTTCCAGTAAGCCC-AGTAATGAGCCTGGCCTCCACCC-TCGTCCG-GTGCTCCGTATTTTCAGAGTCTCCTT-GTAATCGGATCTGAAGCTTCCGAGGGCTGCAGATT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169130987 158 - 170955103 AAGTCAGAGGAAGACACAT----TTCCCACAGAATTAAAATG----ACATGGCAGAAGATCTTTCCAGTAAGCCC-AGTAATGAGCCTGGCCTCCACCC-TCGTCCG-GTGCTCCGTATTTTCAGAGTCTCCTT-GTAATCGGATCTGAAGCTTCCGAGGGCTGCAGATT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163948129 159 + 165299245 AAGTCAGAGGAAGACACAT----TTCCCACAGAATTAAAATG----ACATGGCAGAAGATCTTTCCCGTAAGCCC-AGTAACGAGCCTGGCCTCCACCCTTCGCCCG-GTGCTCCGTATTTTCAGAGTCTCCTT-GTAATCGGATCTGGAGCTTCCGAGGGCTGCAGATT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96733673 159 + 98384682 AAGTCAGAGGAAGACACAT----TTCCCACAGAATTAAAATG----ACACGGCAGAAGATCTTTCCCGTAAGCCC-AGTAACGAGCCTGGCCTCCACCCTCCGCCCG-GTGCTCCGTATTTTCAGAGTCTCCTT-GTAATCGGATGTGGAGCTTCCGAGGGCTGCAGATT i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56216904 160 + 122678785 -CGGCAGCGGAAAACAGATCTCCTTCCCACAATATTAAAAAAAAATACATGGCAGAA-AGCTTTCCCCTAGCCACGAGCCATGAGTCTGGCCTCAGCTCTTCACACGTGTGC----AATTCC----GTCTACTTAGGAATCCAGACTGAGGGCTTAGGGGGCAGCCAGCT i canFam3.chr1 C 0 C 0 e calJac3.chr4 169943252 5 + 171630274 I a score=656512.000000 s hg38.chr6_KB021644v2_alt 154412 208 + 185823 CAGCCTCAACTCCCTGCTCTCAGATTCTCTTTGATCCCAGCTTCATGAGAATGTTTGTTTTATTTTTGAATGTA-CTATGATTTG---AATAGCTCACTTTCTttctta-----acatttttaatatcgtgaaatataacat-aaaaataggcacaaggcaaaaacatgctcctcaattgttt-atcaagaaatgtgaccacacccaggtcagtacaca s panTro4.chr6 170744015 208 + 172623881 cagcctcaactccctgctctcagattctgtttgatcccagcttcatgagaatgtttgttttatttttgaATGTA-CTATGATTTG---AATAGCTCACTTTCTttctta-----acatttttaatatcgtgaaatataacat-aaaaataggcacaaggcaaaaacatgctcctcaattgttt-atcaagaaatgtgaccacacccaggtcagtacaca i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172500444 210 + 174210431 CAGCCTCAACTCCCTGCTCTCAGATTCTCTTTGATCCCAGCTTCATGAGAATGTTTGTTTTATTTTTGAATGTA-CTATGATTTG---AATAGCTCATTTTCTTTCTTA---ATATATTTTTAGTATTGTGAAATATAACAT-AAAAATAGGCACGACACAAAAACATGCTCCTCAATTGTTT-ATCAAGAAATGTGACCACACCCAGGTCAGTACACA i ponAbe2.chr6 C 0 I 17 s nomLeu3.chr3 156360380 210 + 157873769 cagcctcaactccctgctctaagattctctttgttcccagcttcatgagaatgtttgttttatttttgaATGTA-CTATGATTTT---AATAGCTCACTTTCTttctta---acatatttttaatattgtgaaatataacat-aaaaataggcacaaggcaaaaagatgcccttcaatagttt-atcaagaaatgtgaccacacccaggtcagtacaca i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168177185 212 + 169853907 CAGCCTCAACTCCCTGCTCTCAGATTCTCTTTGATCCCAGCTTCGTGAGAATGCTTGTTTTATTTTTGAATGTA-CTACCATTTT---AGTAGCTCACTTTCTttctta---acatatttttaatattgtgaaatataacataaaaaataggcataaggcaataacgttctcctcaattgtttaatcaagaaatgtgaccacacccaggtcagtgcaca i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169131145 212 - 170955103 CAGCCTCAACTCCCTGCTCTCAGATTCTCTTTGATCCCAGCTTCGTGAGAATGCTTGTTTTATTTTTGAATGTA-CTACCATTTT---AGTAGCTCACTTTCTttctta---acatatttttaatattgtgaaatataacataaaaaataggcataaggcaataacgttctcctcaattgtttaatcaagaaatgtgatcacacccaggtcagtgcaca i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163948288 212 + 165299245 CAGCCTCAACTCCCTGCTCTCAGATTCTCTTTGATCCCAGCTTCATGAgaatgcttgttttatttttgaatgta-cTACGATTTT---AGTAGCTCACTTTCtttctta---acatatttttaatattgtgaaatataacataaaaaataggCACAAGGCAATAACGTTCTCCTCAATTGTTAAATCAAGAAATGTGACCACACCCAGGTCAGTGCACA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96733832 212 + 98384682 CAGCCTCAACTCCCTGCTCTCAGATTCTCTTTGATCCCAGCTTCATGAGAATGCTTGTTTTACTTTTGAATGTA-CTACGATTTT---AGTAGCTCACTTTCTttctta---acgtatttttaatattgtgaaatataacataaaaaataggcacaaggcaaaaacgtgctcctcaactgtttaatcaagaaatgtgaccacacccaggtcagtgcaca i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169943257 210 + 171630274 CAGCCTCAACTCCCTGCTCTCGGATTCTCTTTGATCCCAACTTCATGGGAATGCTTGTTTTACTTTGGAATTTA-CTGTGATTTT---AATAGCTCACTCTCATTCTTA---ACACATTTTTGATATTGTGAAATATAACAT-AAAAGTAGGCACAAGGCAAAAACATGCTCCTCAATTGTCT-ATCAAGAAATATCACAACACCCAGGTCAGTGCCCT i calJac3.chr4 I 5 C 0 s canFam3.chr1 56217064 213 + 122678785 CAGCTCCAACGCCCTGCTGTGAGAGTCCCTCC-ATCTCAGGGTCACGCGAGCGTCCATCCCATCTGTTAATTTAGCTGTGGTTTTTAATATGGCTCACtttattttttaaaaaaatattCTTAGTattgtgaaatatttttt-aaaa--agacacaaagcaaaaataaactattcaatgactt-at-ggtctatgtcaccactgccaggtccacacaca i canFam3.chr1 C 0 C 0 a score=804873.000000 s hg38.chr6_KB021644v2_alt 154620 381 + 185823 gaacggccagaactcccaaaggcctgcgctttgtatgccc-t--------------tccctgcgttgcaaAGTTCACTATGCTACGGGCTGCAGTGC-AATCACAGCTTCGCCTTTCTG--CAGAGGCTTAGCTCAACA-------TCACTAAGTACAACGgtgttgcctt-ccttttgaatgttacagacatgtaacatcatgcagtctacagtcctttgcagtctctcg--gtttta---cttgtgaggttcagctgctgctacctgtagccatggttcctttggtgtcactgctgtacaccgtcttattctgccgcatcaatgtaccgaagttcatgtatctattctctggttgagaaaaaagtag---------gtttgtaca-------gttaatactaataacatggctctgaataatcgta s panTro4.chr6 170744223 381 + 172623881 gaacagccagaactcccaaaggcctgcgctttgtatgccc-t--------------tccctgcgttgcaaagttcactatgctacgggctgcagtgc-aatcacagcttcgcctttctg--cagaggcttagctcaaca-------tcactaagtacaacggtgttgcctt-ccttttgaatgttacagacatgtaacgtcatgcagtctacagtcctttgcagtctcttg--gtttta---cttgtgaggttcacctgctgctacctgtagccatggttcctttggtgtcactgctgtacactgtcttattctgccgcatcaatgtaccaaagttcatgtatctattctctggttgagaaaaaagtag---------gtttgtaca-------gttaatactaataacatggctctgaataatcgta i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156360590 378 + 157873769 gaacggccaggactcccgaaggcctgtgctttgtatgccc-t--------------t-cctgcgttgcaaagttcactatgctacgggctgcagtgc-aaccacagcttcgcctttctg--cagaggcttaactcaaca-------tcactaagtacagtggtgttgcctt-ccttttgaatgttacagacatgtaacgtcctgcagtctacagtcctttgcattctctcg--gtttta---cttgtgaggttcacctgctgctacctgtagccatggctcctttggtgtcactgctgtacactgtcttattctgtcgcatcaatgtaccgaagttcatgtatctattctctagttgagaaaaaagtag---------gtttgtaca-------gttaatactaataacacggctctgaataatcg-- i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168177397 377 + 169853907 gaatggccaggactctagaagacctgcactttgtatgccc-t--------------tccccgcgttgcaaagttcactatgctacgggctgcagtgc-aatcacagctttgcctttctg--cagaggcttaactcatca-------tcactaagtacgacggcgttgcctt-ccttgtgaacgttacagacatgc--catcatgcagtc--cagtcctttgcattctctcg--gtttta---cttgtgaggttcacctgctgctacctgtagccatggttcctttggtgtcgctgctgtacactgtcttattctattgcatccgtgttccgaagtttatatatctattctctggttgagaaaaatgtag---------gtttgtaca-------gctaatgctaataacatggctctaaataatcgtg i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169131357 377 - 170955103 gaatggccaagactctagaagacctgcactttgtatgccc-t--------------tccccgcgttgcaaagttcactatgctacgggctgcagtgc-aatcacagctttgcctttctg--cagaggcttaactaacca-------tcactaagtacgacggcgttgcctt-ccttgtgaacgttacagacatgc--catcatgcagtc--cagtcctttgcattctctcg--gtttta---cttgtgaggttcacctgctgctacctgtagccatggttcctttggtgtcgctgctgtacactgtcttattctattgcatccgtgttccgaagtttatatatctattctctggttgagaaaaatgtag---------gtttgtaca-------gctaatgctaataacatggctctaaataatcgtg i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163948500 377 + 165299245 GAATGGCCAGGACTCCAGAAGGCCTGCACTTTGTATGCCC-T--------------TCCCCGCGTTGCAAAGTTCACTATGCTACGGGCtgcagtgc-aatcacagctttGCCTTTCTG--CAGAGGCTTAACTCATCA-------TCACTAACTACGACGGCGTTGCCTT-CCTTGTGAACGTTACAGACATGC--CATCATGCAGTC--CAGTCCTTTGCATTCTCTCG--GTTTTA---CTTGTGAGGTTCACCTGCTGCTACCTGTAGCCATGGTTCCTTTGGTGTCGCTGCTGTACACTGTCTTATTCTATTGCATCCGTGTTCCGAAGTTTATATATCTATTCTCTGGTTGAGAAAAATGTAG---------GTTTGTACA-------GCTAATGCTAATAACATGGCTCTAAATAATCGTG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96734044 377 + 98384682 gaatggccaagactccagaaggcctgcactttgtatgccc-t--------------tccccgcgttgcaaagttcactatgctacgggctgcagtgc-aatcacagctttgcctttctg--cagaggcttaactcatca-------tcactaagtacgacagcgttgcctt-ccttgtgaacgttccagacatgc--cgtcatgcagtc--cagtcctttgcattctctcg--gtttta---cttgtgaggttcacctgcgactgcctgtagccgtggttcctttggtgtcgctgctgtacactgtcttattctatcgcatccgtgttccgaagtttatatatctattctctggttgaggaaaacgtag---------gtttgtaca-------gctaatgctaataacatgggtctaaataatcgtg i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169943467 361 + 171630274 GGATGTGCAGGGCTGCAAAAGGCCTGTGCTTGGTACACCTGT--------------TCCCCGGGCTGCAACGCTCACTGCGCTCTGGGCTGCAGT------CACA-----------CCG--CAGAGGCTCAACTCACCA-------TCACTCAGGACAGCAGCACTGCCCTGCCTGTTGGACGTTACAGACATGC--CATCGTGCAGCCTACAGTC---TGCATTCTCTGG--GATTTAATCCCCGTGACGTTCACCTGCAGCtgcgtgtagccacggtt-ctttcgtgtccctgctgtatgc--tctcgttctac----tcagtgtactcaggtt----tgtctattctctggtggagaaaaaagtaa---------gattgtacagtttatggttaataccaataacacggctttgaataatcatg i calJac3.chr4 C 0 C 0 s canFam3.chr1 56217277 380 + 122678785 gggtgaccaggatatcagaagacctgc---ctgtctgctc-caaaccacgatcctgtctctgc-tcacagggttcactacttttctgtctgtaatgctaatcacttatttgcttttctgaaaaaaagtttaccacacaagcatatgtccctaaacacgatagcattgagtg--ctgttgaacttcattgaaacat--gatcatgacgcgtacagtcctttggattctctcaacattctg---tccatgagatgcacctgtgactactgggaactgtcatccctttagctttgtttctgtgtaTTGTCCTGTCCCATAGCA---------------------------TCTCTTGTGGAGGCAATGGGGGCTGTTCAGAGTTTGGGGA-------TTCAATACCAGTAAC--GGCTGCAAATCACCCTG i canFam3.chr1 C 0 C 0 e ponAbe2.chr6 172500654 17 + 174210431 I a score=2110191.000000 s hg38.chr6_KB021644v2_alt 155001 721 + 185823 tgtgtctctccatg-cccataaacataaatt--cccattcaggagtgg-aactgctagg-a--ccccggtgtagacacct-tcacctttagtagacattg-caaaccatttccaaagtggtttcaccaatttatgtcccc-ccggcagtgtgtgaggataattctcatccacatgccctcttgcgaatgcctgggaccaacagtcttcaacttcaaccattccaggggttgtggaatagcaccttcctcttgacttatttttcattccttgataattattgagattgagcatattttcatatattagttggccattgg-------atatctgta----------tctcacataattttgttttgaactgattgtttttgttgtgttgatttgcagaagttctttatgtatttttaataagagtcctttgttaaatgagtctcaaatatttcctttttctcggtggcttacctttttactctcttaatgggtcttttg-tgaaaataatttcttaatgtatatgtgaccccattataattt-ttcccccttcttggctggcgctAACTCCAGGATAGGGCTAA----------------CTTACT----GGCTTATACCTGCATttt--cctttcttctagtatacacattcaaggccataaatg-tcccttaagcatggctatagttgtattttgtaagtttccatgtggagtattttccttgtcatttacttcatattaatt-------tttagtttac-----------atttttaatttggcacatgc s panTro4.chr6 170744604 721 + 172623881 tgtgtctctccatg-cccataaacataaatt--cccattcaggagtgg-aactgctagg-a--ccccggtgtagacacct-tcacctttagtagacattg-caaaccatttccaaagtggtttcaccaatttatgtcccc-ccggcagtgtgtgaggataattctcatccacatgccctcttgcgaatgcctgggaccaacagtcttcaactttaaccattccaggggttgtggaatagcaccttcctcttgacttatttttcattccttgataattattgagattgagcatattttcatatattagttggccattgg-------atatctgta----------tctcacataattttgttttgaactgattgcttttgttgtgttgatttgcagaaattctttatgtatttttaataagagtcctttgttaaatgagtctcaaatatttcctttttctcggtggcttacctttttactctcttaatgggtcttttg-tgaaaataatttcttaatgtatatgtgaccccattataattt-ttcccccttcttggctggtgctAACTCCAGGATAGGGCTAA----------------CTTACT----GGCTTATACCTGCATttt--ccgttcttctaatatacacattcaaggccataaatg-tcctttaagcatggctatagttgtattttgtaagtttccatgtggagtattttccttgtcatttacttcatattaatt-------tttagtttac-----------atttttaatttggcacatgc i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172500671 725 + 174210431 TGTGTCTCTCCATGCCCCATAAACATAAATT-CCCCATTCaggagtggaaactgctagg-gacccccggtgtagacacct-ccacctttagtagacatcg-aaaaccatttccaaagtggtttcaccaatttatgttccc-ccggcagtgtgtgaggataattctcatccacacgccctcttgcgaatgcctgggaccaacagtcttcaacttcagccattccaggggttgcggaatagcaccttcctcttgacttatttttcattccttgataattattgagattgagcatattttcatatattagttggccattgg-------atatctgta----------tcttccataattttcttttgaactgattgcttttgttgtgttgatttgcaggagttctttatgtatttttgataagagtcctttgttaaatgagtctcaaatatttcctttttctcagtggcttacctttttactctcttaatgggtcttttg-tgaaaataatttcttaatgtatatgtgaccccagtataatct-ttcccctttcttggctggtgcTAACTCCAGGAGAGGGCTAA----------------CTTACT----GGCTTATACCTGCATAtt--cctttcttctaatacacacattcaaggccaacaatg-tccgtaaagcatggctatagttgtattttgtaagtttccatgtggaatattttccttgtcattta-tttatattaatt-------tttagtttac-----------attttttatttggcacatgc i ponAbe2.chr6 I 17 C 0 s nomLeu3.chr3 156360968 720 + 157873769 tgtgtctctctatg-cccaaaagcataaatt--ccccttcaggagtgg-aactgctagg-a--ccccagtgtagacacct-tcacctttagtacacatcg-caaaccatttccaaagtggtttctccaattgatgtcccc-ccggcagtgtgtgaggatgattctcatccacacgccctcttgcaaatgcctgggaccaacagtcttcaacttgagccattgcagggattgtggaatagcaccttcctgttgacttatttttcattccttgataattattgagattgagcgtattttcatatattagttggccattgg-------atatctgta----------tcttacataattttcttttgaactgattgcttttgttgtgttgatttgcagaagttcttcatgtatttttgataagggtcctttgttaaatgagtctcaaatatttcctttttcttggtggcttacctttttactctcttaatgggtcttttg-tgaaaataatttcttaatgtttatgtgaacccgatataattt-tt-ccctttcttggctggtgctAATTCCAGGATAGGGCTAA----------------CTTACT----GGCTTATACCTGCATttt--cctttcttctaatacacacattcgaggccatgaatg-tcctttaagcatggctgtaattgtattttgtaagtttccacgtggagtattttccttgttatttactttatattaatt-------tttagtttac-----------attttttattttgcacatgc i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168177774 709 + 169853907 tatgtctctccatg-cccataaacataaatt--cccattcaggagtgg-aactgctaga-a--cccaggtgtagacacct-tcacctttagtagatatcaccaaaccatttccaaagtggtttcaccaatttttgtcccc-ccagcagtgtgtggggataattctcatccacacgccctcttgcgaatgcccgggaccatcagt-------------cgttccgggggttgtggaatagcactttcctgttgacttagttttcattcctcgagaattattgagattgagcatattttcctatatgagttgtccactgg-------atatctgta----------tcttacataattttcttttgaactgattgcttttgctgtgttgatttgcagaagatctttatgtgtttttgataagagtcctttgttaaatgagtctcaaatatttcctttttctcagtggcttacctttttactctcttaatgggtcttttg-tgaaaataattttttagtgtatatgtgaccccaatataattt-ttcccccttcttggctggtgctAAGTCCTGGATAGGGTTAA----------------CTTACT----GGCTTATACCTGCATttt--cgtttcttctaatatacacatttaaggccataaatg-tcctttaagcatggatggagttgtattttgtaagtttccatgtggagtattttccttgtcatttactttatattactt-------tttagtttac-----------attttttatttggcacgtgg i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169131734 709 - 170955103 tatgtctctccatg-cccataaacataaatt--cccattcaggagtgg-aactgctaga-a--cccaggtgtagacacct-tcacctttagtagatatcaccaaaccatttccaaagtggtttcaccaatttttgtcccc-ccagcagtgtgtgaggataattctcatccacacgccctcttgcgaatgcccgggaccatcagt-------------cgttccgggggttgtggaatagcactttcctgttgacttagttttcattcctcgagaattattgagattgagcatattttcctatatgagttgtccactgg-------atatctgta----------tcttacataattttcttttgaactgattgcttttgctgtgttgatttgcagaagatctttatgtatttttgataagagtcctttgttaaatgagtctcaaatatttcctttttctcagtggcttacctttttactctcttaatgggtcttttg-tgaaaataattttttagtgtatatgtgaccccaatataattt-ttcccccttcttggctggtgctAAGTCCTGGATAGGGTTAA----------------CTTACT----GGCTTATACCTGCAtttt--cgtttcttctaatatacacatttaaggccataaatg-tcctttaagcatggatggagttgtattttgtaagtttccatgtggagtattttccttgtcatttactttatattactt-------tttagtttac-----------attttttatttggcacgtgg i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163948877 709 + 165299245 TATGTCTCTCCATG-CCCATAAACATAAATT--CCCATTCAGGAGTGG-AACTGCTAGA-A--CCCAGGTGTAGACACCT-TCACCTTTAGTAGATATCACCAAACCATTTCCAAAGTGGTTTCACCAATTTTTGTCCCC-CCAGCAGTGTGTGAGGATAATTCTCATCCACACGCCCTCTTGCGAATGCCCGGGACCATCAGT-------------CGTTCCGGGGCTTGTGGAATAGCACTTTCCTGTTGACTTAGTTTTCATTCCTTGAGAATTATTGAGATTGAGCATATTTTCCTATATGAGTTGTCCACTGG-------ATATCTGTA----------tcttacataattttcttttgaacTGATTGCTTTTGCTGTGTTGATTTGCAGAAgatctttatgtatttttgataAGAGTCCTTTGTTAAATGAGtctcaaatatttcctttttctcagtgGCTTACCTTTTTACTCTCTTGATGGGTcttttg-tgaaaataatttcttagtgTATATGTGACCCCAGTATAATTT-TTCCCCCTTCTTGGCTGGTGCTAACTCCTGGAGAGGGTTAA----------------CTTACT----GGCTTATACCTGCATTTT--CGTTTCTTCTAATATACACATTTAAGGCCATAAATA-TCCTTTAAGCATGGATGGAGTTGTATTTTGTAAGTTTCCATGTGGAGtattttccttgtcatttactttatattactt-------tttagtttac-----------attttttatttggcacttgg i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96734421 709 + 98384682 tgtgtctctccacg-cccatcaacataaatt--cccattcaggagtgg-aactgctaga-a--cccaggtgtagacacct-tcacctttagtagataccaccaaaccattcccaaagtggtttcaccaatttttgtctcc-ccagccgtgtgtgaggataattctcatccacacgccctcttgcgaatgcctgggaccatcagt-------------cgttccggcggttgtggaatagcaccttcttgttgacttagttttcattccttgagaattattgagattgagcatattttcctatatgagttgtccactgg-------atatctgta----------tcttacgtaattttcttttgaactgattgcttttgctgtgttgatttgcggaagatctttatgtatttttgatgagagtcctttgttaaatgagtctcaaatatttcctttttctcagtggcttacctttttactctcttaatgggtcttttg-tgaaaataatttcttagtgtatatgtgaccccaatataattt-ttcccccttcttggctggtgctAACTCTTGGATAGGGTTAA----------------CTTACT----GGCTTATACCTGCATttt--catttcttctaatatacacattcaaggccataaatg-tcctttaagcatggatggagttgcattttgtaagtttccatgtggagcattttccttgtcatttactttatattactt-------tttagtttac-----------attttttatttggcacgtgg i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169943828 725 + 171630274 tgtgtctctctgtg-ccca-aaacataaatt--cccattcaggagcag-aattgctagg-a---ccaggtgtaggtcccg-tcccctttcgtagacatcaccaaatgagctccaaagtggctgcaccgatgtatgtccccgccagtggtgtataaagacgattctcacccacaggccttcctgagaatgcatggtaccaaccgtcttcatcttcggccatgccagcggtggtggaatagcaccttcctattgacttatttttgattccttgataattactgagattgagcctatttttatatatgagttggccattgg-------atatctgca----------tcttacatccttttcttttgtaccaactgctttggttgtgctgatctgcagaagttgtttatgtg-tttggctaagagacccttgttacatgagtctcaaatattccctgttcctctgtggcttacctttttaccctcttaatcggtcttttg-tgaaagtaatttcttcatGTATATGTGACCTCGATATAATTT-TTCCCACTTCCTGGCAGGTGCTCATTCCTGGATAGGGTTAG----------------CTCACT----GGCTT-CCTCTGCATttt--ccttccctctaatatacacattgaaggccacacgtg-tccttgaagcat---ttgtactgtactttgtaagtttccatgtggagtattttccttgttgtgtactttatattaatt-------actagtttacattgtgattttattttttacttg--acgtgc i calJac3.chr4 C 0 C 0 s canFam3.chr1 56217657 724 + 122678785 CACCAGGCTCAGCG-CTCCTGAGCACAAATCTCCCCCcctaggtgtgg-gctcgccgggtg--cacaggtatgcatgtctgtcaccttcagagatgatct-cacactatttccagggcggctgcactgacttacctccc--ccaccgacatatgagGCCGACTCT-GCCCACGTGCCCTCTCGTGAACGCTCAGTGAGGACGGA-TTCAGATTCAGCCATTCCAGCCGTGGTGGGATTGCATCTACTCCTTGA-TCAATTTGCATCCCTCGGCCATTATCGAGATGGAGCAT---------------CTGGCCACTTGGGGATCCATATTTGTAAGCTTAACTCTCTTACATGAttttctt-------------------agtgttgatatatagatgatcctaatgtagtctgggtaagagttctttgttcattcaat---gaatat--ccttcctctctgggccttaccttttctcacttttcatgagtgtcttgatgagcagaagttctt-gtgtatacct-agcctgatatcgtttcttccccttttttggctggtgctAACTTTGAGAAAGAATCAAAtttaacttcttagtctttactgttaggttttcgtctttatttttcctttttttctaatatttacagtaaaggttataaatgagcttttaagtatgctgtcggttggattttat--gttttcatgtgcattattttc--tgtcattcattttaTAGttttttaaaaacttttatttat------------ttattcatgagagacacac i canFam3.chr1 C 0 I 167 a score=676941.000000 s hg38.chr6_KB021644v2_alt 155722 226 + 185823 tatttggaagtacattgtttaattttaaaacatatgagtattttctagtcatctttttgttattaatttctggtttattacactgtggtcagagaatgtgctcggtatgatgccaatactttaaaatgtagcgggattcagagttgggtcaagcttagcaaatgtttcagaagcgcttgTGAGACAACAACAAAAACATCTTCACAAGCAGTGTCTTATTTCAGTC s panTro4.chr6 170745325 226 + 172623881 tatttggaagtacattgtttaattttaaaacatatgagtattttctagtcatctttttgttattaatttctggtttattacactgtggtcagagaatgtgctcggtatgatgccaatactttaaaatgtagcgggattcagagttgggtcaagcttagcaaatgtttcagaggcgcttgTGAGACAACAACAAAAACATCTTCACAAGCAGTGTCTTATTTCAGTC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172501396 224 + 174210431 tatttggaagtacattgtttaattttaaaac--atgagtattttctattcgtctttttgttattaatttctggttgattacactgtggtcagagaatgtgctcggtatgatgccaatactttaaaatgtagtgggattcagagtttggtcaagcttagcaaatgtttcagaagtgcttgtaaGACAACAACAAAAACATCTTCACAAGCAATGTCTTATTTCAGTC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156361688 226 + 157873769 tatttggaagtacattgtttaattttaaaacatatgagtattttctagtcatctttttgttattaatttctggtttattacactgtggtcagagaatgtgctcggtatgatgccaatactttaaaatgtagtgggattcagagtttggtcaagcttagcaaatgtttcagaagtgcttgtaaGACAACAACAAAAACATCTCCACAAGCAGTGTCTTATTTCGGTC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168178483 226 + 169853907 tatttggaagtgtattgtttaattttaaaacatatgcgtattttctagtcatctttttgttattaatttctagcttattacactgtggtcagagaatgtgctcagtatgatgccaatactttaaaatgtagtgggattcagcgtttggtcaagcttagcaaacgtttcagaagtgcttgtaaGACAGCAACAAAAACATCTTCACGAGCAGCATCTTATTTAAGTC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169132443 226 - 170955103 tatttggaagtgtattgtttaattttaaaacatatgcgtattttctagtcatctttttgttattaatttctggcttattacactgtggtcagagaatgtgctcagtatgatgccaatactttaaaatgtagtgggattcagcgtttggtcaagcttagcaaacgtttcagaagtgcttgtaaGACAGCAACAAAAACATCTTCACGAGCAGCATCTTATTTAAGTC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163949586 226 + 165299245 tatttggaagtgtattgtttaattttaaaacatatgcgTATTTTCTAGTcatctttttgttattaatttttggCTTATTacactgtggtcagagaatgtGCTCGGTATGATGCCAATACTTTAAAATGTAGTGGGATTCAGCGTTTGGTCAAGCTTAGCAAACGTTTCAGAAGTGCTTGTAAGACAGCAACAAAAACATCTTCACAAGCAGCATCTTATTTAAGTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96735130 226 + 98384682 tatttggaagtgtattgtttaattttaaaacatatgcgtattttctagtcatgtttttgttattaatttctggtttattacactgtggtcagagaatgtgctcggtatgatgccaatactttaaaatgtagtgggattCAGAGTTTGGTCAAGCTTAGCAAACGTTTCAGAAGTGCTCGTAAGACAGCAACAAAAACATCTTCACAAGCAGCATCTTATTTAAGTC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169944553 224 + 171630274 tatttggaagtacgttgtttaattttaaaacatatgagtattttccagtcaaccttttgttattaatttctgacttattacactgtggtcagagaatgtgctcgctgtgatgccaatactttaaaatgcagtgggattca--gtttggtaaagcttagaaagtgtttcatatgtgcttgtaagagaaCAGCAAAAACATCTTCACAAGTAGTATCTTATTTGAGTG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56218381 167 + 122678785 I a score=715225.000000 s hg38.chr6_KB021644v2_alt 155948 238 + 185823 GTGCAGAAAGCTAAGGCATTAGCACTACCATTACTTACATTCAGAGGGAAAGACATTAAATGAGGTCATACTTGTTAAAACTTTTGAAGACAGAAATATA-TTTTCAGTAAATTATTATT------ACTTTAGATT-TTTTATTTCATGCTCTGAGCTAATTATTGACTTCAGGTATTGTGTGGTTAGGGGAAGGTTTGGG-TTTG-GTAACTGTGGAAACCCAAATCCTCACTACCTGTGTGggtgg s panTro4.chr6 170745551 239 + 172623881 GTGCAGAAAGCTAAGGCATTAGCACTACCATTACTTACATTCAGAGGGAAAGACATTAAATGAGGCCATACTTGTTAAAACTTTTGAAGACAGAAATATA-TTTTCAGTAAATTATTATT------ACTTTAGATT-TTTTATTTCATGCTCTGAGCTAATTATTGACTTCAGGTATTGTGTGGTTAGGGGAAGGTTTGGGATTTG-GTAACTGTGGAAACCCAAATCCTCACTACCTGTGTGggtgg i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172501620 241 + 174210431 GTGCAGAAAGCTAAGGCATTAGCACTACCATTACTTACATT-AGAGGGAAAGACATGAAATGAGGTCATACTTGTTAAAACTTTTGAAGACAGAAATATA-TTTTCAGTAAATTATTATT---ATCACTTTAGATT-TTTGATTTCATGCTCTGAGCTAATTATTGACTTCAGGTATTGTGTGGTTAGGGGAAGGTTTGGGATTTG-GTAACTGTGGAAACCCAAACCCTCACTACCTGTGTGggtgg i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156361914 242 + 157873769 GTGCAGACAGCTAAGGCATTAGCACTACCATTACTTACATTTAGAGGGAAAGACATTAAATGAGGTCATACTTGTTAAAACTTTTGAAGACAGAAATATA-TTTTCAGTAAATTATTATT---ATCACTTTAGATT-TTTGATTTCATGCTCTGAGCTAATTATTGACTTCAGGTATTGTGTGGTTAGGGGAAGGTTTGGGATTTG-GTAGCTGTGGAAACCCAAATCCTCACTACCTGTGTGGGTGG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168178709 243 + 169853907 TTGCAAAAAGCTAAGGCATGAACACTACCATTACTTACATTTATAGGGAAAGAAATTAAATGAGGTCATACTTGTTAAAACTTGTGAAGATCGAAATGTATTTTTCAGTAAATTATTATT---ATCACTTTAGATT-TTTGATTTCATGCTCTGAGCTAGTTATTGACTTCTGGTATTGTATGGTTAGGGGAAGGTTTGGGCTTTG-GTAACTGTGGAAACTCAAATCCTCACTACCTGTGTGGGTGG i rheMac3.chr4 C 0 I 311 s macFas5.chr4 169132669 243 - 170955103 TTGCAAAAAGCTAAGGCATGAGCACTACCATTACTTACATTTATAGGGAAAGAAATTAAATGAGGTCATACTTGTTAAAACTTGTGAAGATCAAAATATATTTTTCAGTAAATTATTATT---ATCACTTTAGATT-TTTGATTTCATGCTCTGAGCTAGTTATTGACTTCTGGTATTGTATGGTTAGGGGAAGGTTTGGGCTTTG-GTAACTGTGGAAACTCAAATCCTCACTACCTGTGTGGGTGG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163949812 243 + 165299245 TTGCAAAAAGCTAAGGCATGAGCACTACCATTACTTACATTTATAGGGAAAgaaattaaatgaggtcatacttGTTAAAACTTGTGAAGATcgaaatatatttttcagtaaattattatt---atcactttaGATT-TTTGATTTCATGCTCTGAGCTAGTTATCGACTTCTGGTATTGTATGGTTAGGGGAAGGTTTGGGCTTTC-GTAACTGTGGAAACTCAAATCCTCACTACCTGTGTGGGTGG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96735356 243 + 98384682 TTGCAAAAAGTTAAGGCATGAGCGCTACCGTTACTTACATTTATAGGGAAAGAAATTAAATGAGGTCATACTTGTTAAAACTTGTGAAGATCGAAATACATTTTTCAGTAAATTATTATT---ATCACTTTAGATT-TTTGATTTCATGCTCTGAGCTAGTTATCGACTTCTGGTATTGTATGGTTAGGGGAAGGTTTGGGCTTTG-GTTACTGTGGAAACTCAAATCCTCACTACCTGTGTGGGTGT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169944777 243 + 171630274 TTGCAGAAAGTGAGGGCCTTAGCACTACCAGGACTTACATTTATAGATAAAGAAATGAAATGCAGTCATACCTGTTAAAACTTTTGAAGAT-GAAAGATATTTTTCAGTAAATTATTATC---GTCACTTGAGATG-TTTGATTCTGGGCTCTGAGCCTGTTACTGACTTCAGGTATTGGGTGGTTAGGGGGAGGCTTGGGATCTGAGTGACTGTGGAAACCCAAATCCTTACTACCCTTGTGggcaa i calJac3.chr4 C 0 C 0 s canFam3.chr1 56218548 245 + 122678785 ATACTTGGAATTAAAATGTTGGATTTCAAGTTTTTTACATTTCTAGATGAAGAAATTAAATGAGATCATACTTGTGGAAACATTCGAAAATCGAAAAATGTTTTTAAGTAAGTTATCATTGTTATCACTTCAGATCAAGTGATTTCCAACTCTTGTCTTATTATGGACTCAAGACTTCTGAATGGGAGGGAGATCTCTGGAATCTGAGCAACTGC--AAACCTAGGTCATTAGTGTCCCCATAGCAG- i canFam3.chr1 I 167 C 0 a score=147609.000000 s hg38.chr6_KB021644v2_alt 156186 54 + 185823 ccaggaggcct--------gtgttgctgtctcgccctgggagggtggctcctccagtgtggg- s panTro4.chr6 170745790 54 + 172623881 ccaggaggcct--------gtgttgctgtctcgccctgggagggtggctcctccagtgtggg- i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172501861 54 + 174210431 ccaggaggcct--------gtgttgccatctcgccctgggagggtggctcctccagtgtggg- i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156362156 62 + 157873769 CCAGGAGGCCTGTGTTGCcgtgttgctgtctcgccctgggagggtggctcctccagtgtggg- i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168179263 54 + 169853907 CCAGGAGGCCT--------Gtgtggccatctcgccctgggagggtgacttctccaatgtggc- i rheMac3.chr4 I 311 C 0 s macFas5.chr4 169132912 54 - 170955103 CCAGGAGGCCT--------GTGTGGCCATCTCACCCTGGGAGTGTGACTCCTCCAATGTGGG- i macFas5.chr4 C 0 I 374 s papAnu2.chr4 163950055 54 + 165299245 CCAGGAGGCCT--------GTGTGGCCATCTCGCCCTGGGAGGGTGACTCCCCCAATGTGGG- i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96735599 54 + 98384682 CCAGGAGGCCT--------Gtgtggccgtctcgccctgggagggtgactcctccaatgtggg- i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169945020 53 + 171630274 ccaggaggctt--------gtgtggc-atcttgccctgggagtgtggctcctccaatgtggg- i calJac3.chr4 C 0 C 0 s canFam3.chr1 56218793 36 + 122678785 CTGGgagcact--------------cca------------agtgaggctagtccaa-atggac i canFam3.chr1 C 0 C 0 a score=70877.000000 s hg38.chr6_KB021644v2_alt 156240 28 + 185823 atgtgttgtaggtgtaacatacacaccg s panTro4.chr6 170745844 28 + 172623881 atgtgttgtaggtgtaacatacacaccg i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172501915 28 + 174210431 atgtgttgtgggtgtgacatacacactg i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156362218 28 + 157873769 atgtgttgtaggtgtaacatacacaccg i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168179317 26 + 169853907 atgtgttgtaggcgtaacat--acaccg i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169133340 26 - 170955103 atgtgttgtaggcgtaacat--acaccg i macFas5.chr4 I 374 C 0 s papAnu2.chr4 163950109 24 + 165299245 ACATGTTGTAGGTGTAAC----ACACCG i papAnu2.chr4 C 0 I 188 s chlSab2.chr13 96735653 26 + 98384682 atatgttgtaggtgtaacac--acaccg i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169945073 28 + 171630274 atgtgctgtgggtgtaaagtccacactg i calJac3.chr4 C 0 C 0 s canFam3.chr1 56218829 28 + 122678785 atgtgctaaacgtgcagaatgcacaccc i canFam3.chr1 C 0 C 0 a score=421001.000000 s hg38.chr6_KB021644v2_alt 156268 147 + 185823 atttcaaagactctgtaggaaa--------------gaaagaatgtaaagtatggaattaa-tattgttatattgagtacatgctggaacagtaaccttagggatagactgggcta--gatcaaacgtatcgttaaagcgaatttcatcc----ttttttACGTGATT s panTro4.chr6 170745872 147 + 172623881 atttcaaagactctgtaggaaa--------------gaaagaatgtaaagtatggaattaa-tattgttatattgagtacatgctggaacagtaaccttagggatagactgggcta--aatcaaacgtattgttaaagcgagtttcatcc----ttttttACGTGATT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172501943 148 + 174210431 atttcaaagactctgtaggaaa--------------gaaagaatgtaaagtatggaattaa-tattgtcatattgagtacatgctggaatagtaaacttagggacagactgggcta--aatcaaacgtattgttaaagtgagttt-atcc--ttttttttacGTGATT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156362246 146 + 157873769 atttcaaagactgtgtaggaaa--------------gaaagaatgtaaagtatgggattaa-tattgtcatattgagtacatgctggaatagtaaccttggggatagactgggcta--aatcaaacatattatt-cagtgagtttcatcc----ttgtttGCGTGACT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168179343 149 + 169853907 atttcaaagactctgtaggaaa--------------gaaagaatgtaaagtatcgaattaa-tattgtcatattgagtacatgctggaatagtaatcttaggaatagactgggcta--aatcaaacatattattacagtgagtttcatcc--ttttttttgcgttatc i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169133366 149 - 170955103 atttcaaagactctgtaggaaa--------------gaaagaatgtaaagtatcaaattaa-tattgtcatattgagtacatgctggaatagtaatcttaggaatagactgggcta--aatcaaacatattattacagtgagtttcatcc--ttttttttgcgttatc i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163950321 150 + 165299245 ATTTCAAAGACTCtgtaggaaa--------------gaaagaatgtaaaGTATCGAATTAA-TATTGTCATATTGAGTACATGCTGGAATAGTAATCTTAGGAATAGACTGGGCTG--AATCAAACATATTATTACAGTGagtttcatcc-tttttttttgcGTTATC i papAnu2.chr4 I 188 C 0 s chlSab2.chr13 96735679 149 + 98384682 atttcaaagactctgtaggaaa--------------gaaagaatgtaaagcatcgaattaa-tattgtcatattgagtacatgctggaatagtaatcttaggaatagcctgggcta--aatcaaacatattattacagtgaatttcatcc--ttttttttacattATC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169945101 151 + 171630274 atttcagagactctgcaggaaa--------------gaagggatgtagagttttgcattaa-tattgtcatattgagtacatgctggaatagcaatcttagggacagattgggctaatagtaaaatgtataattaaaatgagtttcatgc--ttttttttactttttt i calJac3.chr4 C 0 C 0 s canFam3.chr1 56218857 161 + 122678785 aaggtgaagacttagtatgaaaaaaagaaagaatgtgagagaatgtaagatgtctcattaattctttccatagtcattacatgtttggataatgggctttgggatgtatt-ggtta--aggaagatatggtgtcagagttaatgtcatctgtttcttcttgctt---- i canFam3.chr1 C 0 I 1281 a score=427675.000000 s hg38.chr6_KB021644v2_alt 156415 153 + 185823 AAGGCCGCTCCGGGAAGATTGAGGTAGTGCTGGCCGTGGTGCTTTCTCTCAAGCAAAGTGCAGGCCTGGGAACGAGCACTAACTAACCACAGCTGCTCACTACGACCTACAGGTGCTCTGGATTTTAACCTGTTTTAACTGCCCAATGTCACG s panTro4.chr6 170746019 153 + 172623881 AAGGCCGCTCCGGGAAGATTGAGGTAGTGCTGGCCGTGGTGCTTTCTCTCAAGCAAAGTGCGGGCCTGGGAACGAGCACTAACTAACCACAGCTGCTCACTACGACCTACAGGTGCTCTGGATTTTAACCTGTTTTAACTGCCCAATGTCACG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172502091 149 + 174210431 AAGGCCGCTCTGGGAAGATTGAGGTAGTGCTGGCCATGGTGCTTTCTCTCAAGCAAAGTGCAGGCCTGGGAACGGGCACTAACTAACCACAGCTGCTCACTATGACCTACAGGTGCTCTGGATTTTAAACTGTTTTAACTGCCCAATGT---- i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156362392 153 + 157873769 AAGGCGGCTCCGGGAGGATTGAGGTAGTGCTGGCCACGGTGCTTTCTCTCAAGCGAAGTGCAGGCCTGGGAATGGGCACTAATGAACCACAGCTGCTCACTATGACCTACAGGTGCACTGAATTTTAACTTGTTTCAACTGCCCAATGTCATG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168179492 152 + 169853907 aaggctgctcctggaagattGAGGTAGTGCTGGCCATGGTGCTTTCTCGCAAGCAAAGTGCAGGTCTGGGAACAGGCACTAACTAACCACAGCTGCTTACTGCGACCTACAGGTGCCCTGGATTTTAACCTGTTTTAACTGCCC-ATGTCACG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169133515 152 - 170955103 aaggctgctcctggaagattGAGGTAGTGCTGGCCATGGTGCTTTCTCGCAAGCAAAGTGCAGGTCTGGGAACAGGCACTAACTAACCACAGCTGCTTACTGCGACCTACAGGTGCCCTGGATTTTAACCTGTTTTAACTGCCC-ATGTCACG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163950471 152 + 165299245 AAGGCCGCTCCTGGAAGATTGAGGTAGTGCTCGCCGTGGTGCTTTCTTGCAAGCAAAGTGCAGGTCTGGGAACAGGCACTGACTAACCACAgctgcttactgcaacctacaGGTGTCCTGGATTTTAACCTGTTTTAACTGCCC-ATGTCACG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96735828 152 + 98384682 AAGGCCACTCCTGGAAGACTGAGGTAGTGCTGGCCATGGTGCTTTCTTGCAAGCAAAGTGCAGGCCTGGGAACAGGTACTAACTAACCACAGCTGCTTACTACGACCTACAGGTGCCCTGGATTTTAACCTGTTTTAACTGCCC-ATGTCATG i chlSab2.chr13 C 0 I 7 s calJac3.chr4 169945252 152 + 171630274 aaggctgttcctggaagactGAGGTAGTGCTGGCTGTAGTGTTTTATCTCAAGGGAAGTGCAGGCCTGGGAATGCGCATTAACTCAGCACAGCTGCTCACTATGACCTACAAGTGCCCTGGATTTGAACCTGCTTGAACTGCTC-AGGTCATG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56219018 1281 + 122678785 I a score=34741.000000 s hg38.chr6_KB021644v2_alt 156568 16 + 185823 GCCATTTTCCACATCT s panTro4.chr6 170746172 16 + 172623881 GCCATTTTCCACATCT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172502240 14 + 174210431 --CATTTTCCACGTCT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156362545 16 + 157873769 GCCATTTTCCACGTCT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168179644 16 + 169853907 GCCATTTTCCATGTCT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169133667 16 - 170955103 GCCATTTTCCATGTCT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163950623 16 + 165299245 GCCATTTTCGATGTCT i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169945404 16 + 171630274 GCCATTTTCCATGTTT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56219018 1281 + 122678785 I e chlSab2.chr13 96735980 7 + 98384682 I a score=528747.000000 s hg38.chr6_KB021644v2_alt 156584 193 + 185823 TTTCTAAATCTACATTTATAAACATAAATACAAATGAATTGTATTTACATAGTTGTGTATTCAACTGTAGATAATCAGAAATTGAC----AATGGTTTAAG---TAATATTTTTCCTGCT-ACCGTTTGTTAGAAGGAACTTGGAAAGAGGGAATGACGGGCTCTGCGCACTCGGGATGTCTGCCGGGAACATGAGTCTTC s panTro4.chr6 170746188 193 + 172623881 TTTCTAAATCTACATTTATAAACATAAATACAAATGAATTGTATTTACATAGTTGTGTATTCAACTGTAGATAATCAGAAATTGAC----AATGGTTTAAG---TAATATTTTTCCTGCT-ACCGTTTGTTAGAAGGAACTTGGAAAGAGGGAATGACGGGCTCTGCGCACTCGGGATGTCAGCCGGGAACATGAGTCTTC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172502254 200 + 174210431 TTTCTAAATCTACATTTATAAACATAAATACAAATCAATTGTATTTACATAGTTATGTATTCAACTGTAGATAATCAGAAATTGACAAAGAATGGTTTAAGCAACAATATTGTTCCTGCT-ACCGTTTGTTAGAAGAGACTTGGAAAGAGGGAGTGACGGGCTCTGCACACTCGGGATGTCAGCCGGGACCATGAGTCTTC i ponAbe2.chr6 C 0 I 919 s nomLeu3.chr3 156362561 200 + 157873769 TTTCTAAATCTACATTTATAAACATAGATACAAATCAATTGTATTTACATAGTTGTGTATTCAACTGTAGATAATCAGAAATTGACAAAGAATGGTTTAAGTAACCATATTTTTCCTGCT-ACCATTTGTTAGAAGAAACTTGGAAAGAGGGAGCAACGAGCTCTGCGCACTTGTGATGTCAGCCGGGACCATGAGTCTTC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168179660 200 + 169853907 TTTCTAAATCTGCATTTATAAACATAAATACAAATCAGTTGTATTTACATAGTTGTGTATTCAACTGTAGACAATCAGAAATTGACAAAGAATGGTTTAAGTAACAGTATTTTCTCTCTTAACCGTTTGTTAGAAGAAA-TTGGAAAGAGGGAGTGACAGGCTCTGTGCACTCAGGATGTCAGTGGGAACTGTGAGTCTTC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169133683 200 - 170955103 TTTCTAAATCTGCATTTATAAACATAAATACAAATCAGTTGTATTTACATAGTTGTGTATTCAACTGTAGACAATCAGAAATTGACAAAGAATGGTTTAAGTAACAGTATTTTCTCTCTTAACCGTTTGTTAGAAGAAA-TTGGAAAGAGGGAGTGACAGGCTCTGTGCACTCAGGATGTCAGTGGGAACTGTGAGTCTTC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163950639 200 + 165299245 TTTCTAAATCtgcatttataaacataaatacaaatcAGTTGTATTTACATAGTTGTGTATTCAACTGTAGACAAACAGAAATTGACAAAGAATGGTTTAAGTAAcaatattttctctcttaacCGTTTGTTAGAAGAAA-TTGGAAAGAGGGAGTGACAGGCTCTGTGCACTCAGGATGTCAGTGGGAACTGTGAGTCTTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96735987 200 + 98384682 TTTATAAATGCAGATTTCTAAACATAAATACAAATCAAATGTATTTACATAGTTGTGTATTCAACTGTAGAGAATCGGAAATTGACAAAGAATGGTTTAAGTAACAATATTTTCCCTCTTAACCGTTTGTTAGAAGAAA-TTGGAAAGAGGGAGCGACAGGCTCTGAGCACTCAGGATGTCAGCGGGAACTGTGAGTCTTC i chlSab2.chr13 I 7 C 0 s calJac3.chr4 169945420 200 + 171630274 TTTCTAAATCTACATTTATAAACATAAATATAAATCAATGGTTTTTACGTAATTGTGTATTCAACTGTAGATAATCAGAAATTGTTGAAGAATGGTTTAAGTAACAATATTTTCCCCTCT-ACTGTTTGTTAGAAGAAACTTGGAAAGAGGGAGCGATGGGCTGTGCACACTCGGGATGTAAGTGGGGACCATGAgtgttc i calJac3.chr4 C 0 C 0 e canFam3.chr1 56219018 1281 + 122678785 I a score=24968.000000 s hg38.chr6_KB021644v2_alt 156777 11 + 185823 CGTTGTCCACC s panTro4.chr6 170746381 11 + 172623881 CGTTGTCCACC i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156362761 11 + 157873769 CGTTGTCCACC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168179860 11 + 169853907 CGTTGTCCACA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169133883 11 - 170955103 CGTTGTCCACA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163950839 11 + 165299245 CGTTGTCCACA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96736187 11 + 98384682 CGTTGTCCACA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169945620 11 + 171630274 tgttgtccact i calJac3.chr4 C 0 C 0 e canFam3.chr1 56219018 1281 + 122678785 I e ponAbe2.chr6 172502454 919 + 174210431 I a score=1219121.000000 s hg38.chr6_KB021644v2_alt 156788 424 + 185823 CTTCATTGTCTCTTAggttcagaatggctgccacacccccaggcatcacgtcagcatcccagcaggagg-aaaaaCCTGAGTCAAAAGCATTTGCTTTGTAGGACTCTGTCTTTTCCTTCAGGGAGGGATATCTGCCCCTGTCCACAGCTTACAGCTCACTGTGCAGAAATGAGTATTACTGTCTCCATAGGCCCCAGGGAGGCCAGGAGCTGAGCCCACACTGAAGGCAGGACAATGAAGGGTGGGAAGCTACAGGCCATGCCATCCTCCCGGGGGAAGAAGCCATAGCACCTTGGGTTACCAGGGTTTGACATAGCTCTTCCAACATTCC-------AA--AAAAAAAAAATGAGGCGACAAAGCATAGTTTC-TAAAAGTTTGAAAAAAGGGTTTTTATTAAAAGATCAACAATATAGTTTCACTAAAATAT s panTro4.chr6 170746392 428 + 172623881 CTTCATTGTCTCTTAGGTTCAGAATGGCTGCCACACCCCCAGGCATCACATCAGCATCCCAGCAGGAGG-AAAAACCTGAGTCAAAAGCATTTGCTTTGTAGGACTCTGTCTTTTCCTTCAGGGAGGGATATCTGCCCCCGTCCACAGCTTACAGCTCACCGTGCAGAAATGAGTATTACTGTCTCCATAGGCCCCAGGGAGGCCAGGAGCTGAGCCCACACTGAAGGCAGGACAGTGAAGGGCGGGAAGCTACAGGCCATGCCATCCTCCTGGGGGAAGAAGCCATAGCACCTTGGGTTACAAGGGTTTGACATAACTCTTCCAACATTCCAA---AAAA--AAAAAAAAAATGAGGCGACAAAGCATAGTTTC-TAAAAGTTTGAAAAAAGGGTTTTTATTAAAAGATCAACAATATAGTTTCACTGAAATAT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172503373 421 + 174210431 CTTCATTGTCTCTTAGGTTCAGAATGGCTG-CACA-CCCCAGGCATCACGTCAGCATCCCAGCAGGAGA-AAAAACCTGAGTCAAAAGCATTTGCTTTGTGGGACTCTGTCTTTTCCTTCAGGGAGGGATATCTGCCCCCGTCCACAGCTTACAGCTCACTGTGCAGAAATGAGTATTACTGTCTCCATAGGCCCCATGGAGGCCAGGAGCTGAGCCCACACTGAAGACAGGACAGTGAGGGGCGGGAAGCTGCAGGCCATGCCATCTTCCTGGGGGAAGAAGCCATAGCACCTTGGGTTACAAGGGTTTGACATAACTCTTCCAACATTCC--------A--AAAAAAAAAATGAGGCAATAAAGCATAGTTTC-TAAACGTTTGAAAAAAGGATTTTCATTAAAAGATCAACAATATAGTTTCACTGAAATAT i ponAbe2.chr6 I 919 C 0 s nomLeu3.chr3 156362772 421 + 157873769 CTTCATTGTCTCTTAGGTTCAGAATGGCTGCCACACCCCCAGGCATCATGTCAGCATCCCAGCAGGAGG-AAAAACCTGAGTCAAAAGCATTTGCTTTGTAGGACTCTGTCTTTTCCTTCAGGGAGGGTTATCTGCCCCCGTCCACAGCTTACAGCTCACCACGCAGAAATGAGTATTACTGTCTCCATAGGTCCCAGGCAGGCCAGGAGCTGAGCCCGCACTGAAGGCAGGACAGTGAGGGGTGGGAAGCTGCAGGCCACACCATCTTCCTGGGGGAAGAAGCCATAGCACTTTGGGTTACAAGGGTTTGACGTAACTCTTCCAACATTCC------------AAAACAAAATGAGGCGACAAAGCACAGTTTC-TAAAAGTTTGAGAAAAGGGTTTTCATTAAAAGATCAACAATATAGTTTCACTGAAATAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168179871 421 + 169853907 CCCCATTGTCTCTTAggttcagaatggctgccacacctccaggcatcacatcagcatcccagcaggagg-aaAACCC---GTCAAAAGCATTTGCTTTGTAGGACTCTGTCCTTTTCTTCAGGGAGGGATATCTGCCCCCATCCACAGCTTACAGCTCACCATGCAGAAATGAGTATTATTGTCTCCATAGGCCCCAGGGAGGCTGGGCGCTGAGCCTGCACTGAAGGTAGGACAGTGTGGGGTGGGAAGCTGCAGGCCACACCATCTTCCCAGGGGAAGAAGCCATAGCACCTTAGGTTATAAGGGTTTGACGTAACTCTTCCAACATTCC-------AG--AAAAAAGAAATGAAGCAACAAAGCATAGTTTC-TAAAAGTTTGAAAAAAAGGTTTTCATTAAAAGATCAACAATATAGTTTCACTGAAATAt i rheMac3.chr4 C 0 I 312 s macFas5.chr4 169133894 421 - 170955103 CCCCATTGTCTCTTAggttcagaatggctgccacacctccaggcatcacatcagcatcccagcaggagg-aaAACCC---GTCAAAAGCATTTGCTTTGTAGGACTCTGTCCTTTTCTTCAGGGAGGGATATCTGCCCCCATCCACAGCTTACAGCTCACCATGCAGAAATGAGTATTATTGTCTCCATAGGCCCCAGGGAGGCTGGGCGCTGAGCCTGCACTGAAGGTAGGACAGTGTGGGGTGGGACGCTGCAGGCCACACCATCTTCCCAGGGGAAGAAGCCATAGCACCTTAGGTTATAAGGGTTTGACGTAACTCTTCCAACATTCC-------AG--AAAAAAGAAATGAAGCAACAAAGCATAGTTTC-TAAAAGTTTGAAAAAAAGGTTTTCATTAAAAGATCAACAATATAGTTTCACTGAAATAt i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163950850 421 + 165299245 CCCCATTGTCTCTTAGGTTCAGAATGGCTGCCACACCTCCAGGCATCACATCAGCATCCCAGCAGGAGG-AAAACCC---GTCAAAAGCATTTGCTTTGTAGGACTCTGTCCTTTTCTTCAGGGAGGGATATCTGCCCCCATCCACAACTTATAGCTCACCATGCAGAAATGAGTATTATTGTCTCCATAGGCCCCAGGGAGGCCAGGCGCTGAGCCTGCACTGAAGGGAGGACAGTGTGGGGTGGGAAGCTGCAGGCTACACCATCTTCCCAGGGGAAGAAGCCATAGCACCTTGGGTTACAAGGGTTTGACGTAACTCTTCCAACattcc-------ag--aaaaaagaaatgaagcaacaAAGCATAGtttc-taaaagtttgaaaaaaaggTTTTCATTAAAAGATCAACAATATAGTTTCACTGAAATAT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96736198 424 + 98384682 CCCCATTGTCTCTTAggttcagaatggctgccacacctccaggcatcacatcagcatcccagcaggaggaaaaaCCC---GTCAAAAGCATTTACTTTATAGGACTCTGTCCTTTTCTTCAGGGAGGGATATCTGCCCCCATCCACAACTTACAGCTCACCATGCAGAAATGAGTGTTATTGCCTCCATAGGCCCCCGGGAGGCCGGGCGCTGAGCCTGCACTCAAGGCAGGACAGTGTGGGGTGGGAAGCTGCAGGCTACACCATCTTCCCAGGGGAAGAAGCCATAGCACCTTGGGTTACAAGGGTTTGACGTAACTCTTCCAACATTCC-------AGGAAAAAAAAAAATGAAGCAACAAAGCATAGTTTA-TAAAAGTTTGAAAAAAAGGTTTTCATTAAAAGATCAACAATATAGTTTCACTGAAATAT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169945631 424 + 171630274 cagccttgtctcttaggttcagaatggctcccacacctccaggcatcacat--------cAGCAGGAGG-AAAAACCCGAGTCAAAAGCATTAGCTTTGTAGGACTCTGTCCTTTCCTTCAGGGAGGGATATCTGACCCCGTCCACAGCTTACAGCTCACTGTGCAGAAATGAGTATCATGGTCTACACAGGTCCCAGGGAGACCGGGCGCTGAGCCCACGCTGAAGGCAGGACAGTGCGGGGCAGGAAGCTGCAGGCTACGCCATTGTCCCAGGGAAAGAAGCTGTAACACCTTGGGTTACAAGTGTTTGACATAACTCTTCCAGCATTCCAAATTAAAA--AAAAAAAAAATGAAGCGAAAAAGCATAGTTTTATAAAAGTTTGAAAAAATGGTTTTCATTAAAAGACCAACAATCTAGTTTCACTGAAATAC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56219018 1281 + 122678785 I a score=2323.000000 s hg38.chr6_KB021644v2_alt 157212 2 + 185823 GC s panTro4.chr6 170746820 2 + 172623881 GC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172503794 2 + 174210431 GC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156363193 2 + 157873769 AT i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169134315 1 - 170955103 -t i macFas5.chr4 C 0 I 288 s papAnu2.chr4 163951271 2 + 165299245 GC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96736622 2 + 98384682 GC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169946055 2 + 171630274 GC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56219018 1281 + 122678785 I e rheMac3.chr4 168180292 312 + 169853907 I a score=3489179.000000 s hg38.chr6_KB021644v2_alt 157214 1273 + 185823 TTTTTAGAAAAGACTCGTTTATGTTTTTTATCTTTCTCAACCTGAAATCCAGCTCTGATGTTTTATTGTTGCGGGT-CCG-TGGAGATGAATCTCTGCTGGTCTTCCCTCATCGGCTTTCCTGACCTTGTGAGGGGAAGACCAGGGTGCTTGACACAAAAGACTTCTTTTCACAGG-CCCCTCATCCGGAGTCGGGGCTGCTCTCCTTTCATGGTGGGCACAGGTGGTCTCGTGTTTACATCTGAGCCCTGCTGTTGGCGTTCATGCCCCCAGAGGAGTCCTGCCCCAGAATCAGACTCACTGCATCTTCCTTTTTGAAGACAAAGTTGTATTATGTGATTTCCTTTTGCTTTGCACAAAGCAAGATGC--TCCCACCGAGGCTGGGAGCCAGTTCTGTATCTTTCAAGTCA-------CAAGC-GATCCTTGACCTCAGGGTCTAAATGACTCAGGGAGGCCCCGAGAGACCAAGGTCCTGTCCAAGCCCACAGAGATGTTGCTCAGGGAGCACTTTTCACTTGAAAAGGCAGCCACACCAGTCTCTCCCCATC-------TGAGGAGCCCCC-------------------------------GACCAGGCCGGGCCCCGTGCTCTTTTCCTGTCAATTAGATCACCTTTATTTGGCCC---CTGCTGCACTGAATCATGTCTTCTGGAACATCTGCAATGGATAC-CTGTATCTTGTACTTAAGCACAGCCTCAAACATGTTCTCACTGGGTTTGCTGCCATTTCCTTCATCTCAC--------TTTTTTTTTTTTTTTCTGAGACGGAGTGATAAG--------AtttatttttttatttttatttttcttgagacagagtctcgctctgttacccaggctggagtgcagtggtacgatctcagctcactgcaacctctgcctcccaggttcaaacggttttgctgcctcagcctcctgagtagctgggattacagacatgcaccgccacactcatctaatttttgtatttttagtagagacagggttttgctgtgttggccaggctcagccttgaactcctgacctttagtgatctgcctgccttggcctcccaaagtgctgggattataggtgtgagccaccatgcccggccAAGACAGGGTGATGAGTTTTAAAGAGTAAGATCTGTGTTTATAGTGAGTGCTGGTAAATAAATTTGATGTC-TTTTTATTACATTCATTTTGCAGATACAAAATAACTTACTTGGGTACTAAGCCTCTTGATAAAAAATGACTGAGCCAAAAATCCACGTTTTCCTTCATGACTAAGacggtatggatatttctctgcccaaatttc s panTro4.chr6 170746822 1273 + 172623881 TTTTTAGGAAAGACTCGTTTATGTTTTTTATCTTTCTCAACCTGAAATCCAGCTCTGATGTTTTATTGTTGCGGGT-CCGTTGGAGATGAATCTCGGCTCGTCTTCCCTCATTGGCTTTCCTGACCTTGTGAGGGGAAGACCAGGGTGCTTGACACAAAAGACTTCTTTTCACAGG-CCCCTCATCCGGGGGCGGGGCTGCTCTCCTTTCATGGTGGGCACAGGTGGTCTCGTGTTTACATCTGAGCCCTGCTGTTGGCGTTCATGCCCCCAGAGGAGTCCTGCCCCAGAATCAGACTCACTGCATCTTCCTTTTTGAAGACAAAGTTGTATTATGTGATTTCCTTTTGCTTTGCACAAAGCAAGATGC--TCCCACCGAGGCTGGGAGCCAGTTCTGTATCTTTCAAGTCA-------CAAGC-GATCCTTGACCTCAGCGTCTAAATGACTCAGGGAGGCCCCGAGAGACCAAGGTCCTGTCCAAGCCCACAGAGATGTTGCTCAGGGAGCACTTTTCACTTGAAAAGGCAGCCACGCCAGTCTCTCCCCGTC-------TGAGGAACCCCC-------------------------------GACCAGGCTGGGCCCCGTGCTCTTTTCCTGTCAATTACATCACCTTTATTTGGCCC---CTGCTGCATTGAATCATGTCTTCTGGAACATCTGCAATGGATAC-CTGTATCTTGTACCTAAGCACAGCCTCAAACATGTTCTCACTGGGTTTGCTGCCATTTCCTTCATCTCAC---------TTTTTTTTTTTTTTCTGAGACGGGGTGATAAG--------AtttatttttttatttttatttttcttgagacagagtctcgctctgttacccaggctggagtgcagtggtgcgatctcagctcactgcaacctccgcctcccaggttcaaacagttttgctgcctcagcctcttgagtagctgggattacagacatgcaccaccacactcatctaatttttgtatttttagtagagacagggttttgctacgttggccaggctcagccttgaactcctgacctttagtgatctgcctgccttggcctcccaaagtgctgggattataggtgtgagccaccatgcccggccAAGACAGGGTGATGAGTTTTAAAGAGTAAGATCTGTGTTTATAGTGAGTGCTGGTAAATAAATTTGATGTC-TTTTTATTACATTCATTTTGCAGATACAAAATAACTTACTTGGGTACTAAGCCTCTTGATAAAAAATGACTGAGCCAAAAATCCACGTTTTCCTTCATGACTAAGacggtatggatatttctctgcccaaatttc i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172503796 1283 + 174210431 TTTTTAGAAAAGACTTGTTTATG-TTTTTATCTTTCTCAACCTGAAATCCAGCTCTGATGTTTTATTGTTGTGGGT-ACG-TGGAGATGAATCTCTGCTCGTCTTCCTTCATCGGCTTTCCTGACCTCGTGAGGGGAAGACTGGGGTCCTTGACACAAAAGACTTCTTTTCACAGG-CCCTTCATCCGGGGGCGGGGCTGCTCTCCTCTCATGGTGGGCACAGGTGGTCTCGTGTTTACATCTGAGCCCTGCTGTTGGCATTCATGCCCCCACAGGAGTCCTGCCCCGGAATCAGACTCATTGCATCTTCCTTTTTGAAGACAAAGTTGTATTATGTGATTTCCTCTTGCTTTGCACAAATCAAGATGCTGTCCCACCGAGGCTGGGAGCTAGTTCTGCATCTTTCAAGTCA-------CAAGCTGATCCTTGACCTCAGGGTCTAAATGACTTAGGGAGGCCCCGAGAGACCAAGGTCCTGTCCAGGCCCACAAAGATGTTGCTCAGGGAGCACTTTTCACTTGAAAAGGCAGCCATGCCAGTCTCTCCTCGTC-------TGAGGAACCCCT------------------------------GGACCAGGCCGGGCCCCGGGCTCTTTTCCTGTCAATTACATCACCTTTATTTGGCCG---CTGCTGCACTGAATCATGTCTTCTGGAACATCTGCAATGGATACTTTGTATCTTGTACCTAAGCACAGCCTCAAACATGTTCTCACTGGGTTTGCTGCCATTTCCTTCATCTCACT-------TTTTTTTTTTTTTTTCTGAGACAGGGTGATAAGTtttatttattcatttatttatttTTAtttttcttaagacagagtctcgctctgttacccaggctggagtgcagtggtgtgatctcagctcactgcaacctctgcctcccagattcaaa--gttttgctgccccagcctcctg-gtagctgggattatagacatgcaccaccacactcatctaatttttgtatttttagtagagacagggttttgctatgttggccaggctcagtcttgaactcctgacctttagtgatctgcctgccttggcctcccaaagtgctgggattataggtgtgagccaccatgcccggccAAGACAGGGTGATGAGTTTTAAAGAGTAAGATCTGTGTTTATAGTGAGTGCTGGTAAATAAATTTGATGTC-TTTTTATTACATTCATTTTGCAGATACAAAATAACTTACTTGGGTACTAGGCCTCTTGATAAAAAATGACTGAGCCAAAAATCCATGTTTTCTTTCATGACTAAGacggtgtggatatttctttgcccaaatttc i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156363195 1287 + 157873769 TTTTTAGAAAAGACTTGTTTATGTTTTTTATCTTTCTCAACCTGAAATCCAGCTCTGATGTTTTATTGTTGTGGGTGACG-TGGAGATGAATCTCTGCTCGTCTTCCCTCATCGGCTTTCGTGACCTCGTGAGGGGAAGACTGGGGTCCTTGACACAAAAGACTTCTTTTCACAGG-CCCCTCATCCAGGGGTGGGGCTGCTCACCTCTCATGGTGGGCACAGGTGGTCTCGTGTTTACATCTGAGCCCTGCTGTTGGTGTTCATGCCCCCAGAGGAGTCCTGCCCTGGAATCAGACTCGCTCTGTCTTCCTTTTTGAAGACAAAGTTGTATTATGTGATTTCCTCTTGCTTTGCACAAATCAAGATGCTGTCCCACCGAGGCTGGGAGCTAGTTCTGCATCTTTCAAGTTG-------CAAGCTGATCCTTGACCTCAGAGTCTAAATGACTCAGCGAGGCCCCGAGAGACCAAGGTCCTGTCCAAGCCCACAGAGATGTTGCTCAGGGAGCACTTTCC-CTTGAAAAGGCAGCCACGCCAGTCTCTCCCCATC-------TGAGGAACCCCT------------------------------GGACCAGGCCCGGCCCCAGGTTCTTTTCCTGTCAATTTCATCACCTTAATTTGGCCC---CTGCTGCACTAAATCATGTCTTCTGGAACATCTGCAATGGATACTTTGTATCTTGTACCTAAGCACAGCCTCAAACATGTTCTCACT-GGTTTGCTCCCATTTCCTTCATCTCACT-------TTTTTTTTTTTCTGTCTGAGACAGGGTGATACGTTTTAtttatttatttatttatttttatttttcttgagacagagtctcgctctgttacccaggctggagtgcagtggggcgatctcggctcactgcaacctctgcctcccaagttcaagcagttttgctgcctcagcctcctgagtagctgggattacagacatgcaccaccacactcatctagtttttgtatttttagtatagacagggttttgctatgttggccaggctcagtcttgaactcctgacctttagtgaactgcctaccttggcctcccaaagtgctgggattataggtgtgagccaccatgcccggccAAGACAGGGTGATGAGTTTTAAAGAATAAGATCTGTGTTTATAGTGAGTGCTGGTAAATAAATTTGACGTCTTTTTTATTACATTCATTTTGCAGACACAAAATAACTTACTTGGGTACTAGGCCTCTTGATAAAAAATGACTGAGCCAAAAATCCATGTTTTCCTTCATGACTAAGacggtgtggatatttctctgaccaaatttc i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168180604 1298 + 169853907 TTTTTAGAAAAGACTTGTTTATGTTTTTTCTCTTT-TCAACCTGAAATCCAGCTCTGATGTTTTATTATTGTGGG------TGGAGATGAATCTCCGCTCGTCTTCCCTCATCGGCTTTCCTGACCTTGTGAAGGGAAGACCGGGGTCCCTGACATAAAAGACTTCTTTTCACAGA-CCCGTCATCCAGGGGCGGTGCTGCTCTCCTCTCACGGTAGGCACAGGTGGTCTCGTATTTACATCTGAGCCTTGCTGTTGGCGTTCACGCCCCCAGAGGAGTCCCGCCCCGGAATCAGGCTCACTCCATCTTCCTTTTTGAAGACAAAGTCATATTATGTGATTTCCTTTTGCTTTGCACAAATCAAGATGCCGTCCCACCAAGGCTGGGAGCTAGTTCTGCGTCTTTCAAGTCA-------CAAGCTGATCCTTGACCTCAGG------AGGACTCAGGGAGGCCCCGAGAGACCAAGGTCCTGTTCAAGCCCACGGAGATGGTGCTCAGGGAGCACTTTTCATGTGAAAAGGAGGCCACATCAGTCTCTCCCCATC-------TGAGGAAACCCCAAGCAAGCGAGCGAGCGGAGACTTCTCCCGGGACCCGGTCGG-CCCTGGGCTCCTCTCCTGTCAATTACATCACCTTTATTTAGCCC---GTGCTGCACTGAGTCATTTCTTCTGGAACAACTACAATGGATACTTTGTATCTTGTACCTAAGCACAGCCTCAAACATGTTCTAATTGGGTTTGGGCCCATGTCCTTCATTTAGCTTTTTTTGTTTTGTTTTGTTTTCCTGAAACAGGGTGATAAGTtttatctatttatttatttatttTTAtttttcttgagacagagtctcgccctttta--cagacttgagtgcagtggtgcgatctcagctcactgtgacctcagcctcccaggttcaagaagttttgctgcctcagcctcttgagtagctgggattacagacatgcaccaccacactcagctaatttttg-----------gagacggggtttcactatgttggccaggctcggtcttgaactcctgacctttagtgatctgcctgccttggcctcccaaggtgctgggattataggtgtgagccactgtgcccggcTAAGACAGGATGATAAGTTTTAAAGAGTAAGGTCTGTGTTTATAGTGAGTGCTGGTAAATAAATTTGATGTA-TTTTTATTGTATTCATTTTGCAG-TACAAAATAACTTACTTGGGTCCTAGGTCTCTTGATAAAAAATGGCTGAGCCAAAAATCCACGTTTTCCTTCATGACTAAAAGggtgtggatatttctctgcccaaatttc i rheMac3.chr4 I 312 I 2 s macFas5.chr4 169134604 1306 - 170955103 TTTTTAGAAAAGACTTGTTTATGTTTTTTCTCTTT-TCAACCTGAAATCCAGCTCTGATGTTTTATTATTGTGGG------TGGAGATGAATCTCCGCTCGTCTTCCCTCATCGGCTTTCCTGACCTTGTGAAGGGAAGACCGGGGTCCCTGACATAAAAGACTTCTTTTCACAGA-CCCGTCATCCAGGGGCGGTGCTGCTCTCCTCTCATGGTAGGCACAGGTGGTCTCGTATTTACATCTGAGCCTTGCTGTTGGCGTTCACGCCCCCAGAGGAGTCCCGCCCCGGAATCAGGCTCACTCCATCTTCCTTTTTGAAGACAAAGTCATATTATGTGATTTCCTTTTGCTTTGCACAAATCAAGATGCCGTCCCACCAAGGCTGGGAGCTAGTTCTGCGTCTTTCAAGTCA-------CAAGCTGATCCTTGACCTCAGG------AGGACTCAGGGAGGCCCCGAGAGACCGAGGTCCTGTTCAAGCCCACGGAGATGGTGCTCAGGGAGCACTTTTCATGTGAAAAGGAGGCCACATCAGTCTCTCCCCATC-------TGAGGAAACCCCAAGCAAGCGAGCGAGCGGAGACTTCTCCCGGGACCCGGTCGG-CCCTGGGCTCCTCTCCTGTCAATTACATCACCTTTATTTAGCCC---GTGCTGCACTGAGTCATTTCTTCTGGAACAACTACAATGGATACTTTGTATCTTGTACCTAAGCACAGCCTCAAACATGTTCTCATTGGGTTTGGGCCCATGTCCTTCATTTAGCttttt---ttttttttttttttCCTGAAACAGGGTGATAAGTTTTATCTAtttatttatttatttttatttttcttgagacagagtctcgctctgtta--cagactggagtgcagtggtgccatctcagctcactgtgacctcagcctcccaggttcaagaagttttgctgcctcagcctcttgagtagctgggattacagacatgcaccaccacactcagctaatttttgtatttttagtagagacgcggtttcactatgttggccaggctcggtcttgaactcctgacctttagtgatctgcctgccttggcctcccaaggtgctgggattataggtgtgagccactatgcccggcTGAGACAGGATGATAAGTTTTAAAGAGTAAGGTCTGTGTTTATAGTGAGTGCTGGTAAATAAATTTGATGTA-TTTTTATTGTATTCATTTTGCAG-TACAAAATAACTTACTTGGGTCCTAGGTCTCTTGATAAAAAATGGCTGAGCCAAAAATCCACGTTTTCCTTCATGACTAAAAGggtgtggatatttctctgcccaaatttc i macFas5.chr4 I 288 C 0 s papAnu2.chr4 163951273 1303 + 165299245 TTTTTAGAAAAGActtgtttatgttttttctcttt-tcaacctGAAATCCAGCTCTGATGTTTTATTATTGTGGG------TGGAGATGAATCTCCGCTCGTCTTCCCTCATCAgctttcctgaccttgtgaaggGAAGACCGGGGTCCCTGACACAAAAGACTTCTTTTCACAGA-CCCCTCATCCAGGGGCGGGGCTGCTCTCCTCTCATGGTGGGCACAGGTGGTCTCGTATTTACATCTGAGCCTTGCTGTTGGCGTTCACGCCCCCAGAGGAGTCCCGCCCCGGAATCAGGCTCACTCCATCTTCCTTTTTGAAGACAAAGTCATATTATGTGATTTCCTTTTGCTTTGCACAAATCAAGATGCCGTCCCACCAAGGCTGGGAGCTAGTTCTGCGTCTTTCAAGTCA-------CAAGCTGATCCTTGACCTCAGG------AGGACTCAGGGAGGCCTGGAGAAACCAAGGTCCTATTCAAGCCCATGGAGATGGTGCTCAGGGAGCACTTTTCATGTGAGAAGGAGGCCACATCCATCTCTCCCCATC-------TGAGGAACCCC----CAAGCGAGCCCGCAGAGACTTCTTCCTGGAACGGGTCGGCCCCCGGGCTCTTCTCCTGTCAATTACATCACCTTTATTTAGCCC---GTGCTACACTGAGTCATTTCTTCTGGAACAACTACAATGGATACTTTGTATCTTGTACCTAAGCACAGCCTCAAACATGTTCTCATTGGGTTTGGGCCCATGTCCttcatttagcttt-----ttttttttttttcccctgaaacaGGGTGATaagttttatctatttatttatttatttttatttttcttgagacagagtctcactcggttacccagactggagtgcagtggtgcgatctcagctcactgtgacctccgcctcccaggttcaagcagttttgctgcctcagcctcttgagtagctgggattacagacatgcaccaccacactcagctaatttttgtgtttttagtagagacgcggtttcactatgttggccaggctcggtcttgaaatcctgacctttagtgatctgcctgccttggcctcccaaggtgctgggattataggtgtgagccactatgcccggctgagACAGGATGATAAGTTTTAAAGAGTAAAGTCTGTGTTTATAGTGAGTGCTGGTAAATAAATTTGATGTC-tttttattgtattcattttgCAG-TACAAAATAACTTACTTGGGTCCTAGGTCTCTTGATAAAAAATGGCTGAACCAAAAATCCACGTTTTTCTTCATGACTAAAAGGGTGTGGATATTTCTctgcccaaatttc i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96736624 1310 + 98384682 TTTTTAGAAAAGACTTGTTTATGTTTTTTCTCTTT-TCAACCTGAAATCCAGCTCTGATGTTTTATTACTGTGGG------TGGAGATGAATCTCCGCTCGTCTTCCCTCATCGGCTGTCCTGACCTTGTGAAGGAGAGACTGGGGTCCCTGACACAAAAGACTTCTTTTCACAGACCCCCTCATCCAGGGGCGGGGCTGCTCTCCTCTCATGGTGGGCACAGGTGGTCTCGTATTTACATCTGAGCCTTGCTGTTGGCGTTCACGCCCCCAGAGGAGTCCCGCCCCGGAATCAGACTCACTCCATCTTCCTTTTTGAAGACAAAGTCATATTATGTGATTTCCTTTTGCTTTGCACAAATCAAGATGCCGTCCCACCAAGGCTGGGAGCTAGTTCTGCGTCTTTTAAGTCA-------CAAGCTGATCCTTGACCTCAGG------AGGACTCAGGGAGGCCCCGAGAGACCGAGGTCCTGTTCAAGCCCAAGGAGATGGTGCTCAGGGAGCACTTTTCATGTGAAAAGGAGGCCACATCAGTCTCTCCCCATC-------TGAGGAAACCCCAAGCAACCCAGCGAGTGGAGACTTCTCCCTGGACCCCCTCGG-CTCTGGGCTCCTCTCCTGTCAATTACATCACCTTTTTTTAGCCC---CTGCTGCACTGAGTCATTTTTTCTGGAACAACTACAATGGATACTTTGTATCTTGTACCTAAGCACAGCCTCAAACATGTTCTCATCGGGTTTGGGTCCATTTCCTTCATTTAGCtttttt--ttttttttttttttCCTGAGACAAGGTGATAAGTTTTATCTAtttatttatttatttttatttttcctgagacagagtctcactctgttacctataatggagtgcagtggtgcgatctcagctcactgtaacctccacctcccaggttcaagcagctttgcagcctcagcctcttgagtagctgggattacagacatgcaccaccacactcagctaatttttgtatttttagtagagaccaggtttcactatgttggccaggctccgtcttgaactcctgacctttagtgatctgcctgccttggcctcccaaggtgctggggttagaggtgtgagccactatgcccggATGAGACAGGATGATAAGTTTTAAAGAGTAAGGTCTGTGTTTATAGTGAGTGCTGGTAAATAAATTTGATGTC-TTTTTATTGTATTCATTTTGCAG-TACAAAATAACTTACTTGGGTACTAGGTCTCTTGATAAAAAATGGCTGAGCCAAAAATCCACGTTTTCCTTCATGACTAAAatggtgtggatatttctctgcccaaatttc i chlSab2.chr13 C 0 I 2 s calJac3.chr4 169946057 1295 + 171630274 TCTTTACAAACTACTCGTTCATGCTTTTTCTCTTTCTCAACCTGAAATCCAGCTCTGCTGTGTTACTGTTGTGGGTGGCG-TGGAGAGGAATCTCTGCCTGTCTCCCCTTACCCGCTTTCCTGACCTCAAGAGGGGAAGACT-GAGTCCTTGA-ACAAAAGGGTTCTTTTCACCGA-ACGCTCACCCAGGGTGGGGCCTGCTCTCCTGTGACTGTGCGCAGAGGGGGTCTTGCGTTTACATCCAAGCCCTGCCATTGGCGTCCACTCCCCCAGAGGAATCCTGCCCCAGAATCAGACTCACTCCATCTTCCTTTTTGAAGACAAAGTCACGTTATGTGATTTCCTTTTGCTTTGCACAAATCAAGATGCTGCCCCATTGTTGCTGGGAGCCAGTTCTGATTCTTTCAAGTCACAAGTCTCAAGCTGAGCCTTGACCTCAGGCTCCAAATGACTCAGAGAGGCCCCCAGAGACTAAGGTCCTATCCAAG-CCACAGAGATGGTGCTCAGGGACCACACTT-------------GGCCACGCCAGTCTCTCCCCGTCTGAGGTGTGAGGAAGCCCT------------GAGCAGAGACCTCTCCCTGGACCAGGCGGG-GCTCAGGCTCTTTTCCTGTCTATTGCAACATCTTCGTTCCGCCCCCACTGCTGCCCAGGACCATTTCCTCTGGAATGTCTCCGATGGGTCCTTTCTATTCTGCACCTGAGCACAGCCTCAAACAGGTTCTCATAGGGTTTGCTCTAATTTCCTTCATCTAGC----------TATTTTTTTCTTTCTGAGACAGAGTGCTAAGttttatttattta------tattttcatttttcttgagacagagtcttgctctgtcacccaggctggagtgcagtggtgcgatcttagctcacagcaacctccgtctcctgggttcaagcagttctcctgcctcagtctcctgagtagctgggattacaggtgtgcaccaccatgcccagctaatttttgtatttttagtagagacagggtttcactatgtaggccaggctcggtcttgaactcctgatctctagtgacctgcctgcctgggcctcctaaagtgctgggtttataggcatgagccactgtgcccggccAAGACAGGGTGATATATTTTAAAGAGTAAGATCTGTGTTTATGGTGAGTTCTGATAAATAAATTTGAT-TT-TTTTAATCGAATGCATTTTGCAGATACAAAA-AACATACTTGAGTACTGGGTCTCTTTACAAAAAATGAATGAGCCAAAACTCCATGTTTTCCTTCACGACCAGAatggtgtggatacatctctgcccacatttc i calJac3.chr4 C 0 C 0 e canFam3.chr1 56219018 1281 + 122678785 I a score=137882.000000 s hg38.chr6_KB021644v2_alt 158487 110 + 185823 atgttgaatatggaatgttgaatggaatccctaatgttgaagggaagtgactgggttatgggagtggatttctcatgaatggtttagccccatcctcttgacactgtcct s panTro4.chr6 170748095 110 + 172623881 atgttgaatatttaatgttgaatggaatccctaatgttgaagggaagtgactgggttatgggagtggatttctcatgaatggtttagccccatcctcttgacactgtcct i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172505079 110 + 174210431 atattgaatatggaatgttgaatggaatccctaatgttgaagggaagtgactgggttacgggagtggatttctcatgaatggtttagccccatcttcttgacactgtcct i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156364482 79 + 157873769 atgttgaatatggaatgttgaatggaatccctaatgttgaagggaagtgactgggttacgggagtggatctctcatgaa------------------------------- i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169135910 95 - 170955103 --------------acgttgaatggaatccctaatgttggagggaagtgattgggttacgggagtggatttctcatgaatggtttagccccatcctcttgacactgtcc- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163952576 95 + 165299245 --------------atgttgaatggaatccctaatgttggagggaAGTGATTGGGTTACGggagtggatttctcatgaatggtttagcccCATCCTCTTGacactgtcc- i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169947352 87 + 171630274 --------------aagctgaatggaatccctaacgttggagggcagt-----ggttacgggagtggatttctcatg-atggtttagccccacc--cctggcactgtcc- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56219018 1281 + 122678785 I e chlSab2.chr13 96737934 2 + 98384682 I e rheMac3.chr4 168181902 2 + 169853907 I a score=1568738.000000 s hg38.chr6_KB021644v2_alt 158597 632 + 185823 gttgaatggaatccctaatgttgaagggaagtgactgggttacgggagtggatttctcatgaatggtttagccccatcctcttgacactgtcctcatgat----agtgggtgctcacaagatc----tggttgttaaagtgtgtggtgcctcccac-tctgctcctgctctcaccccctcagatgtccaccc------------------tctcttcgcctttcattataattagaagcttcctaaggcctccccagaagctgagcagacatcatcaccacactttctgtacagcctgcagaaccatgagccaaat-aaacctcttttctttataaattacccagtctcaggtattcctttatggcaacccaaggacaagctatacaGTGAAGCCACATGAATCCCATTAATGCAGTGCGCACTGTAATCAGATTGCTTTCTAATTCTATCTAATTTTCTTCATTTAACATGGGTTGCAAGAATAGTTATATGTAACTGCAGTCAACCCATAAGATGGAACAGGGTAGTTGCTAAAATAAAGCAACATATCAAGAAG---TAAGTTTTGAAATTTTTTTTATTAATTGAAATTGGATGATCACTTTTAACTTTATTCATAAATCTATCAAAACTTTAGACACGTTTTGCTAAGCAAAAAGGTA s panTro4.chr6 170748205 631 + 172623881 gttgaatggaatccctaatgttgaagggaagtgactgggttacgggagtggatttctcatgaatggtttagccccatcctcttgacactgtcctcacaat----agtgggtgctcacaagatc----tggttgttaaagtgtgtggtgcctcccac-tctgctcctgctctcaccccctcagatgtccaccc------------------tctctccgcctttcatcataattagaagcttcctaaggcctccccagaagctgagcagacatcagcaccacactttctgtacagcctgcagaaccatgagccaaat-aaacctcttttctttataaattacccagtctcaggtattcctttatggcaacccaaggacaagctatacaGTGAAGCCACATGAATCCCATTAATGCAGTGTGCACTGTAATCAGATTGCTTTCTAATTCTATCCAATTTTCTTCATTTAACATGGGTTGCAAGAATAGTTATATGTAACTGCAGTCAACCCATAAGATGGAACAGGGTAGTTGCTAAAATAAAGCAACATATCAAGAAG---TAAGTTTTGAAA-TTTTTTTATTAATTGAAATTGGATGATCACTTTTAACTTTATTCATAAATCTATCAAAACTTTAGACACGTTTTGCTAAGCAAAAAGGTA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172505189 636 + 174210431 gttgaatggaatccatattgttgaagggaagtgactgggttacgggagtggatttctcatgaatggtttagccccatcctcttgacactgtcctcatgatagtgagtgggtgctcacaagatc----tggttgttaaagtgtatggcacctcccacacctgctcctgctcttaccccctcagatgtccaccc------------------tctcttcacctttcaccataattagaagcttcctgaggccttcccagaagctgagcagacatcagcaccacacttgctgtacagcctgcagaaccatgagccaaat-aaacctcttttctttataaattacccagtctcaggtattcctttatggcaacccaaggacaagctatacaGTGAAGCCACATGAATCCCATTAATGCAGTGTGCACTGTAATCAGATTGCTTTCAAATTCTATCTAATTTTCTTCATTTAACATGGGTTGCAAGAATAGTTACATGTAACTGCAGTCAACCCATAAGATGGAACAGGGTAGTTGCTAAAATAAAGCAACATATCAAGAAG---TAAGTTTTGAAA-TTTTTTTATTAATTGAAATTGGATGATCACTTTTACCTTTATTCATAAATCTATCAAAACTTTAGACACATTTTTCTAAGCAAAAAGTTA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156364561 572 + 157873769 ---------------------------------------------------------------tggtttagccccatcctcttgacactgtcctcatgatagtgagtgggtgctcacaagatc----tggttgttaaagtgtgtggtacctcccacacctgctcctgctc-caccccctcggatgtccaccc------------------tctcttcgcctttcaccataattagaagctccctgaggcctccccagaagctgagcggacatcggcaccacactttctgtacagcctgcagaaccatgagccaaat-aaacctcttctctttataaattacccagtctcaggtattcctttatggcaacccaaggagaagctatacaGTGAAGCCACCTGAATCCCATTAATGCAGTGTGCACTGTAATCAGATTGCTTTCAGATTCTATCTGATTTTCTTCATTTAACATGGGTTGCAAGAACAGTTATATGTAACTGCAGCCAACCTATAAGATGGAACAGGGTAGTTGCTAAAATAAAGCAACATATCAAGGAG---TAAGTTTTGAAA-TTTTTTTATTAATTGAAATTGGATGATCACTTTTAACTTTATTCATAAATCTATCAAACCTTTAGACACGTTTTGCTAAGCAAAAAGTTA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168181904 652 + 169853907 gttgaatggaatccctaatgttggagggaagtgattgggttacgggagtggatttctcatgaatggtttagccccatcctcttgacactgtcctcatgatagtgaatgagtgctcacaagatc----tggttgttgaagtgtgtggcgcctcccacacctgctcctgctctcgccccctgagatgtccaccctcccttcgcctttcgccatctcttcgcctttcgccataattagaagcttcctgaggcttccccagaagctgagcagacatcaa-accatactttctctacagcctgcagaaccatgagccaaat-aaacctcttttctttataaattacccagtctcaggtattccttgatggtaacccaagaacaggctaTGCAGTG-AGCCACATGAATCCCACTAATGCAGTGCACACTGTAATCAGATTGCTTTCAAGTTCTGTCTAATTGTCTTCATTTAACATGGGTTGCAAGAACAGTTATATGTAACTGCAGTCAAACCGTAAGACGGAACAGGGTAGTTGCTAAAATAAAGCAACATATCAAGAAG---TAAGTTTTGAAA-TTGTTTTACTAATTGAAATTGGATGATCACTTTTAACTTTATTCATAAACCTATCAAAACTTTAGACACATTTTGCTAAGCAAAAAGATA i rheMac3.chr4 I 2 C 0 s macFas5.chr4 169136005 559 - 170955103 ---------------------------------------------------------------------------------------------tcatgatagtgaatgagtgctcacaagatc----tggttgttgaagtgtgtggcacctcccacacctgctcctgctctcgccccctgagatgtccaccctcccttcgcctttcgccatctcttcgcctttcgccataattagaagcttcctgaggcttccccagaagctgagcagacatcaa-accatactttctctacagcctgcagaaccatgagccaaat-aaacctcttttctttataaattacccagtctcaggtattccttgatggtaacccaagaacaggctaTGCAGTG-AGCCACATGAATCCCACTAATGCAGTGCACACTGTAATCAGATTGCTTTCAAGTTCTGTCTAATTGTCTTCATTTAACATGGGTTGCAAGAACAGTTATATGTAACTGCAGTCAAACCGTAAGACGGAACAGGGTAGTTGCTAAAATAAAGCAACATATCAAGAAG---TAAGTTTTGAAA-TTGTTTTACTAATTGAAATTGGATGATCACTTTTAACTTTATTCATAAACCTATCAAAACTTTAGACACATTTTGCTAAGCAAAAAGATA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163952671 559 + 165299245 ---------------------------------------------------------------------------------------------tcatgatagtgaatgagtgctcacaagatc----tggttgttgaagTGTGTGGCGCCTCCCACACCTGCTCCTGCTCTCGCCGCCTGAGATGTCCACCCTCCCTTCGCCTTTCGCCATCTCTTCGCCTTTCGCCATaattagaagcttcctgaggcttccccagaagctgagcagacaTCAA-ACCATACTTtctctacagcctgcagaaccatgagccaaat-aaacctcttttctttataaattacccagtctcaggtattccttgatGGTAACCCAAGAACAGGCTATGCAGTG-AGCCACATGAATCCCACTAATGCAGTGCACACTGTAATCAGATTGCTTTCAAGTTCTGTCTAATTGTCTTCATTTCACATGGGTTGCAAGAACAGTTATATGTAACTGCAGTCAAACCGTAAGACGGAACAGGGTAGTTGCTAAAATAAAGCAACATATCAagaag---taagttttgaaa-ttgttttACTAATTGAAATTGGATGATCACTTTTAACTTTATTCATAAACCTATCAAAACTTTAGACACGTTTTGCTAAGCAAAAAGACA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96737936 633 + 98384682 gttgaatggaatccctaatgtaggagggaagtgattgggttacgggagtggatttctcatgaatggcttagccccatcctcttgacactgtcctcatgatagtgaatgagtgctcacaagatc----tggttgttgaagtgtgtggcgcctcccacacctgctcctgctctcgccccctgagatgtccaccc------------------tctcttcacctttcaccataactagaagcttcccaaggcctccccagaagctgagcagacgtcggcaccacactttctgtacagcctccagacccatgagccaaataaaacctattttctttataaattacccagtctcaggtattccttgatgataacccaagaacaggctaTGCAGTG-AGCCAAATGAATCCCACTAATGTGGTGCACACTGTAATCACATTGCTTTCAAGTTCTGTCTAATTGTCTTCATTTAACATGGGTTGCAAGAATAGTTATATGTAACTGCAGTCAAACCATAAGACGGAACAGGGTAGTTGCTAAAATAAAGCAACATATCAAGAAG---TAAGTTTTGAAA-TTGTTTTACTAATTGAAATTG---GATCACTTTTAACTTTATTCATAAACCTATCAAAACTTTAGACACATTTTGCTAAGCAAAAAGATA i chlSab2.chr13 I 2 C 0 s calJac3.chr4 169947439 548 + 171630274 ---------------------------------------------------------------------------------------------tcatgacagtgagtgagggctcacgagatctggttggttgtttaagtgtgtgatgcctcccacacctgctcctgctcttcccccgtgagacgtccgccc------------------tctctccgcctttcgtcatgattatgagctccctgaggcctccccagaagctgagcagacatcggcacc-cacttttggtacagcctgcagaaccgcgagccaaat-aacgctcttctccttatggatcacccagtctcagccattcctacacggcaacgcgaggacaggctGCACAGCG-AGCCACAGGAATCCCGCGAACGCAGTGTACGCTGCGATGACATTGTTTTCAAATTCTATGTCGTTTTCCTAATTTAACATGGGTTGTGAGGATAGTGATCTATAACTCCAATCAAACCATAAGATGGAACGGGGTAGTTGCTAATATAAAGCAACATATCAGGAAGAAATAAGTTTTTAAA-TTGTTTTATTAATTGAAATTGGATGATCACTTTTAACTCTATTCATAAATCTATAAATACTTTAGATACTTTTTGCTAAGAAAAAGtata i calJac3.chr4 C 0 C 0 e canFam3.chr1 56219018 1281 + 122678785 I a score=38408.000000 s hg38.chr6_KB021644v2_alt 159229 426 + 185823 TTTTAATACAAttttttttattattatactttaagttttagggtacatgtgcacaatgtgcaggttagttacatatgtatacatgtgccatgctggtgtgctgcacccattaactcatcatttagcattaggtatatctcccaatgctatccctcctccctccccccaccccacaacagtccccagagtgtgatgttccccttcctgtgtccatgtgttctcattgttcaattcccatctatgagtgagaacatgtggtgtttggttttttgtccttgtgatagtttactgagaatgatgatttccaatttcatccatgtccctacaaaggacatgaactcatcattttttatggctgcatagtattccatggtgtatatatgccacattttcttaatccagtctatcattgttggacatttgggc s panTro4.chr6 170748836 426 + 172623881 TTTTAATACAAttttttaaattattatactttaagttttagggtacatgtgcacattgtgcaggttagttacatatgtatacatgtgccatgctggtgcgctgcacccactaactcgtcatctagcattaggtatatctcccaatgctatccctcccccctccccccaccccacaacagtccccagagtgtgatgttccccttcctgtgtccatgtgttctcattgttcaattcccatctatgagtgagaacatgcgatgtttggttttttgtccttgtgatagtttactgagaatgatgatttccaatttcatccatgtccctacaaaggacatgaacttatcattttttatggctgcatagtattccatggtgtatatatcccacattttcttaatccagtctatcattgttggacatttgggc i panTro4.chr6 C 0 C 0 e calJac3.chr4 169947987 0 + 171630274 C e canFam3.chr1 56219018 1281 + 122678785 I e chlSab2.chr13 96738569 0 + 98384682 C e papAnu2.chr4 163953230 0 + 165299245 C e nomLeu3.chr3 156365133 0 + 157873769 C e rheMac3.chr4 168182556 0 + 169853907 C e ponAbe2.chr6 172505825 0 + 174210431 C e macFas5.chr4 169136564 0 - 170955103 C a score=1474775.000000 s hg38.chr6_KB021644v2_alt 159655 545 + 185823 tTTTAATACAATTAAACAAATATATATGTACATGTTCACACATGGGTATGGT---AAAAAAAAAAAAAA---AACTGATCGCTGAATTGCTTTTGTTAAGAAGCCAAACGACTGTACCTCAGTCTCTGGCA----------------------GCAGGATCCTGAGCCTGTTCTTG----------------------CAGGAGCCTGAGCCTGTTCTTATGATAACAGACAGCTCTGAACACAAATGTGCTGGTCTTCTTCAGCTTCACCCTTTCCAGTTCTCTATCTTCAGTATCTGTCTCGGGACCCACCTGTAACCTCCCTCGTGTCTTCCATTTCCGAAGGCAAGTTCCTTAGGTAGGAACCATCTCTGTGAAAGGGGAGGCTGCAATGGTGCCATGAAGAAAGACTGGGAATGGTTTCCGTGAAAACACAGGCAGGCCGGGCGCCACTTCTGAGTCTGATGTGTTTGACAACATCCTTCCGGTCTCCTTCCATCTTCTGCTCCTTCCTCTTCCCTCTGCC--GAATTTTGCTCTTCTGCAGTTCTTGAGGCACATTTTAGGCCCTGACCAATAAAGACGTAAACAAGCACA s panTro4.chr6 170749262 567 + 172623881 tTTTAATACAATTAAACAAATATATATGTACATGTTCACACATGGGTATGGT---AAAAAAAAAAAAAA---AGCTGGTCGCTGAATTGCTTTTGTTAAGAAGCCAAACGACTGTACCTCTGTCTCTGGCAGCAGGAGCCTGACCCTGTTCTTGCAGGAGCCTGAGCCTGTTCTTG----------------------CAGGAGCCTGAGCCTGTTCTTATGATAACAGACAGCTCTGAACACAAATGTGCTGGTCTTCTTCAGCTTCACCCTTTCCAGTTCTCTATCTTCAGTATCTGTCTCGGGACCCACCTGTAACCTCCCTCGTGTCTTCCCTTTCTGAAGGCAAGTTCCTTAGGTAGGAACCATCTCTGTGAAAGGGGAGGCTGCAATGGTGCCATGAAGAAAGACTGGGAATGGTTTCCGTGAAAACACAGCCAGGCCGGGCGCCACTTCTGAGTTTGATGTGTTTGACAACATCCTTCCGGTCTCCTTCCATCTTCTGCTCCTTCCTCTTCCCTCTGCC--GAATTTTGCTCTTCTGCAGTTCTTGAGGCACATTTTAGGCCCCGACCAATAAAGACGTAAACAAGCACA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172505825 564 + 174210431 TTTTAATACAATTAAACAAATATATATGTACATGTTCACACATGGGTATGGT------AAAAAAAAAAA---AGCTGGTCGCTGAATTGCTTTTGTTAAGAAGCCAAACAACTGTACCTCAGTCTCTGGCAGCAGGAGCCTGAGCCAGTTCTTGCAGGAGCCTGAGCCTGTTCTTG----------------------CAGGAGCCTGAGCCTGTTCTTGTGATAACAGACAGCTCTGAGCACAAATGTGCTAGTCTTCTTCAGCTTCACCCTTTCCAGTTCTCTATCTTCAGTATCTGTCTCGGGACCCACCTCTAACCTCCCTCGTGTCTTCCATTTCCAAAGGCAAGTTCCTTAGGTATGAACCATCTCTGTGAAAAGGGAGGCTGCAATGGTGCCATGAAGAAAGACCGGGAATGGTTTCCATGAAAACACAGCCAGGCCGGGTGCCACTTCTGAGTCTGATGCGTTTGACAACATCCTTCCAGTCTCTTTCCATCTTCTGCTCCTTCCTCTTCCCTCTGCC--GAATTTTGCTCTTCTGCAGTTCTTGAGGCACATTTTAGGCCCTGACCAACAAAGCCGTAAACAAGCACA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156365133 522 + 157873769 TTTTAATACAATT----AAATATATATGTACATGTTCACACATGGGTATGGTaaaaaaaaaaaaaaaaa---GGCTGGTCGCTGAATTGCTTTTGTTAAGAAGCCAAACAACTGTACCTCAGTCTCTGGCA--------------------------------------------G----------------------CAGGAGCCTAAGCCTGTTCTTGTGATAACAGACAGCTCTGAGCACAAATGTGTTGGTCTTCTTCAGCTTCACCCTTTCCAGTTCTCTATCTTCAGTATCTGTCTCGGGACCCACCTCTAACCTCCCTCGTGTATTCCATTTCTGAAGGCAAGTTCCTTAGGTAGGAACCATCTCTGTGAAGGGGGAGGCTGCAATGGTGCCATGAAGAAAGACCAGGAATGGTTTCCGTGAAAACACAGCCAGGCCGGGTGCCACTCCTGAG--TGATGCATTTGACAACATCCTTCCAGTCTCCTTCCATCTTCTGCTCCTTCCTCTTCCCTCTGCCGAGAATTTTGCTCTTCTGCAGTTCTTGAGGCACATTTTAGGCCCTGACCAACAAAGACGTAAACTAGCACA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168182556 543 + 169853907 TTTTAATACAATTAAACAAATATATATGTACATGTTCACACATGGGTATGGG---GG-AAAAAAAAAAA---AGGTGGTTGCTGAATTGCTTTTGTTAAGAAGCCAAACAACTGCACCTCAGTTTCTGGCA----------------------GCAGGAGCCTGAGCCTGTTCTTG----------------------CAGGAGCCTGAGCTTGTTCTTGTGATAACAGACAGTTCTGAACACAAATGTGCTGGTCTTCTTCAGCTTCACCCTTTCTTGTTCTCTACCTTCAGTGTCTGTCTCAGAACCCACCTCTAACCTCCCTCGTGTCTTCCATTTCCGAAGGCAAGTTCCTTAAGT-GGAACCATCTCTGTGAAAGGGGAGGCTGCAATGGTGCCGTGAAGAAAGACTGGGAATGGTTTCTGTGAAAACACAGCCAGGCCGGGCGCCACTTCTGAGTCTGATGCATTTGTCAACATATTTCCAGTCTCCTTCCATCTTCTGCTCCTTCCTCTTCCCTCTGCC--GAATTTTGCTCTTCCGCAGTTCTTGAGGCACATTTTAGGCCCCGACCAACAAAGACTTAAACAAGCACA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169136564 541 - 170955103 TTTTAATACAATTAAACAAATATATATGTACATGTTCACACATGGGTATGGG---GG---AAAAAAAAA---AGGTGGTTGCTGAATTGCTTTTGTTAAGAAGCCAAACAACTGCACCTCAGTTTCTGGAA----------------------GCAGGAGCCTGAGCCTGTTCTTG----------------------CAGGAGCCTGAGCTTGTTCTTGTGATAACAGACAGTTCTGAACACAAATGTGCTGGTCTTCTTCAGCTTCACCCTTTCCTGTTCTCTACCTTCAGTGTCTGTCTCAGGACCCACCTCTAACCTCCCTCGTGTCTTCCATTTCCGAAGGCAAGTTCCTTAAGT-GGAACCATCTCTGTGAAAGGGGAGGCTGCAATGGTGCCGTGAAGAAAGACTTGGAATGGTTTCTGTGAAAACACAGCCAGGCCGGGCGCCACTTCTGAGTCTGATGCATTTGTCAACATATTTCCAGTCTCCTTCCATCTTCTGCTCCTTCCTCTTCCCTCTGCC--GAATTTTGCTCTTCCGCAGTTCTTGAGGCACATTTTAGGCCCCGACCAACAAAGACTTAAACAAGCACA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163953230 564 + 165299245 TCTTAATacaattaaacaaatatatatgtatatgttcacACATGGGtatggg---aa--aaaagcaaaa---agctggTTGCTGAATTGCTTTTGTTAAGAAGCCAAACAACTGCAACTCAGTCTCTGGCA----------------------GCAGGAGCCTGAGCCTGTTCTTGCAGGAGCCTGAGCCTGTTCTTACAGGAGCCTGAGCCTGTTCTTGTGATAACAGACAGTTCTGAACACAAATGTGCTGGTCTTCTTCAGCTTCACCCTTTCCTGTTCTCTATCTTCAGTGTCTGTCTCGGGACCCACCTCTAACCTCCCTCGTGTCTTCCATTTCCGAAGGCAAGTTCCTTAAGT-GGAACCATCTCTGTGAAAGGGGAGGCTGCAATGGTGCCGTGAAGAAAGACTGGGAATGGTTTCTGTGAAAACACAGCCAGGCCGGGCGCCACTTCTGAGTCTGATGCATTTGTCAACATATTTCCAGTCTCCTTCCATCTtctgctccttcctcttccctctgcc--gAATTTTGCTCTTCTGCAGTTCTTGAGGCACATTTTAGGCCCTGACCAACAAAGACTTAAACAAGCACA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96738569 545 + 98384682 TTTTAATACAATTAAACAAATATATATGTACATGTTCACACATGGGTATGGG---GG--AAAAAAAAAACACAACTGGTTGCTGAATTGCTTTTGTTAAGAAGCCAAACAACTGCACCTCAGTCTCTGGCA----------------------GCAGGAGCCTGAGCCTGTTCTTG----------------------CAGGAGCCTGAGCTTGTTCTTGTGATAACAGACAGTTCTGAACACAAATGTGCTGGTCTTCTTCAGCTTCACCCTTTCCTGTTCTCTATCTTCAGTGTCTGTCTCGGGACCCACCTCTAACCTCCCTCGTGTCTTCCATTTCCGAAGGCAAGTTCCTTAAGT-GGAGCCTTCTCCGTGAAAGGGGAGGCTGCAATGGTGCCGTGAAGAAAGACTGGGAATGGGTTCTGTGAAAACACAGCCAGGCCCGGCGCCACTTCTGAGTCTGATGCGTTTGTCAACATATTTCCAGTCTCTTTCCATCTTCTGCTCCTTCCTCTTCCCTCTGCC--GAATTTTGCTCTTCCGCAGTTCTTGAGGCACATTTTAGGCCCTGACCAACAAAGACTTAAACAAGCACA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169947987 477 + 171630274 ttttaattcaattaa--aaatatatatGTACAAGTTCACACCTGGGTTTGGT---AA--------AAAA---TGTTGGTGACATAATTGCTTTTGTTAAGAAGCCAAGCAACTGCACCCGAGTCTCTGGCA--------------------------------------------G----------------------CAGGAGCCTGAGCCTGTTCTTGTGATAACGAGC----------------GTGC----------------CACCCTTTCCAGTTCTCTGTCTGCAGCGCCTGTCTCGGGACCCACCACTAACCTGCCTTCTGTCTTCCATTTCTGAA-GCAGGTTCCTTAGCTAGGAACCATCTCTGTGAA-GGGGAGGCTGCAACAGTGCCACGAAGAAGCAACGGGAATGGCTTCCTGGACAACACAGCCAGGCCAGGCACCGCTTCCGAGCCTGATGCTTTGGACGACGTCCTTCCCGTCTCCTTCCATCTTCTGCTCCTT-CTCTTCACTCTGCT--GAGTTTTGCTCTTCTGCAGTTCTGGGGGCACATTTTAGTCCCTGACCAACAAAGAGGT-AACCAGCACC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56219018 1281 + 122678785 I a score=1120511.000000 s hg38.chr6_KB021644v2_alt 160200 438 + 185823 AGCGGAAAACAAAACTAGCTTAACGAGTTCACTGCTAATTATTGCCTGTTAGCATGAAAAGAATAGCACAATTCTTCACATTTTTGGTTAAGGAAACGTTACCCACACATTCATATGTAAATTGATTCTGACCAAATTGTTTGGAGTGGGAATTTTAG-TTTATCTGTGAGCA--------CTGTCTCTCAGGGGCTGAGAATGAGCCCAGCAATGGGAACCATCGCATGCAGGAacacacacccgcaacacagacacatgcatgcaaacacagcagcacgtacacatgcaacgc----------tacacaca--------------------atgtgcacaatgcacacacacatgcatacaagcacagcaacacgtacacatgcgacaccacacacac--ataca-----------------------gtgtgcacagtgcacacacac--gcacacaaggacagcaacacagacacatgtgacac--cacacacaca---tgcaca s panTro4.chr6 170749829 438 + 172623881 AGCGGAAAACAAAACTAGCTTAACGAGTTCACTGCTAATTATTGCCTGTTAGCATGAAAGGAATAGCATAATTCTTCACATTTTTGGTTAAGGAAACATTACCCACACATTCATATGTAAATTGATACTGACCAAATTGTTTGGAGTGGGAATTTTAG-TTTATCTGTGAGCA--------CTGTCTCTCACGGGCTGAGAATGAGCCCAGCAATGGGAACCATCGCATGCAGGAacacacacccgcaacacacacacatgcatgcaaacacagcagcacgtacacatgcaacgc----------tacacaca--------------------gtgtgcacaatgcacacacacatgcacacaagcacagcaacacgtacacatgcgacaccacacacac--ataca-----------------------GTGTGCACAGTGcacacacac--gcacacaaggacagcaacacagacacatatgacac--cacacacaca---tgcaca i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172506389 468 + 174210431 AGGGGAAAACAAAACTAGCTTAACCAGTTCACTGCTACTTATTGCCTCTTAGCATGAAAACAATAGCACAATTCTTCACATTTTTGGTTAAGGAAACATTACCCACACATTCACATGTAAATTGATTCTGACCAAATTGTTTGGAGTGGGAATTTTAG-TTTATCTGTGAGCA--------CTGTCTCTCAGGGGCTGAGAATGAGCCCAGCAATGGGCACCATCGCATGCAGGAacacacacccgcaacacacacacatgcatgcaaacacagcaacacgtacacatgcaacaccacac--acacacacaca--------------------gtgtgcacaatgcacacacacatgcacacaagcacagcaacacagacacatgtgacaccacacacac--atgcacacaagcacagcaacacagacacatgtg-acaccacacacacat--gaacacaagcacagcaacacagacacatgtgacac--cacacacaca---tacaca i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156365655 372 + 157873769 AGGGGAAAACAAAACTAGCTTAACCAGTTCGCTGCTAATTATTGCCTGTTAGCATGAAAAGAATAGCACAATTCTTCACACTTTTGGTTAAGGAAACATTACCCACACATTCACATGTAAATTGATTCTGACCAAATTGTCTGGAGTGGGAATTTTAG-TTTATCTGTGAGCA--------CTGTCTCTCAGGGGCTGAGAATGAGCCCAGCAGTGGGCACCATCGCATGCAGGAacacacacctgcaacacacacacatgcatgcaaacacagcaacacgt------------------------------------------------------------------------------------------------acacctgtgacaccacacacac--a--ca-----------------------gtgtgcacaatgcacacacac--gcacacaagcacaccaacacgtacatgtgtgacaccacacacacaca---tgcaca i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168183099 444 + 169853907 AGGGGAAAACAAAACTAGCTTAACCAGTTCACTGCTAATTATTGCCTGTTAGCATGAGAAGAAGAGCACAATTCTTCACATTTTTGGTTAAGGAAACGTTACCCACACATTCACATGTAAATTGATTCTGACCAGATTGTTTGGAGTGGGAATTTTAG-CTCAGCTGTGAGCA--------CTGTCTCTCAGGGGCTGAGAATGAGCCCAGCAATGGGCACCATCACATGCAGGAACACACACCTGCAATGcacacac--acacgcaaacacagcaacacatacacatgcgacacaacacagacacacacacG--------------------GTGTGCATGATGcacacacacatgtacacaaggacaac-------acacacgtgacaccacacacatgaacaca-----------------------gtgtgcacgatgcacacacacatgcacacaagcacagcaacacgtaca--tgtgacac--cacacacacagtctgcaca i rheMac3.chr4 C 0 I 27 s macFas5.chr4 169137105 444 - 170955103 AGGGGAAAACAAAACTAGCTTAACCAGTTCACTGCTAATTATTGCCTGTTAGCATGAGAAGAAGAGCACAATTCTTCACATTTTTGGTTAAGGAAACGTTACCCACACATTCACATGTAAATTGATTCTGACCAAATTGTTTGGAGTGGGAATTTTAG-CTCAGCTGTGAGCA--------CTGTCTCTCAGGGGCTGAGAATGAGCCCAGCAATGGGCACCATCACATGCAGGAacacacacctgcaatgcacacac--acacgcaaacacagcaacacatacacatgcgacacaacacagacacacacacg--------------------gtgtgcatgatgcacacacacatgtacacaaggacaac-------acacacgtgacaccacacacatgaacaca-----------------------gtgtgcacgatgcacacacacatgcacacaagcacagcaacacgtaca--tgtgacac--cacacacacagtctgcaca i macFas5.chr4 C 0 I 3 s papAnu2.chr4 163953794 442 + 165299245 AGGGGAAAACAAAACTAGCTTAACCAGTTCACTGCTAATTATTGCCTGTTAGCATGAGAAGAAGAGCACAATTCTTCACATTTTTGGTTAAGGAAACGTTACCCACACATTCACATGTAAATTGATTCTGACCAAATTGTTTGGAGTGGGAATTTTAG-TTCAGCTGTGAGCA--------CTGTCTCTCAGGGGCTGAGAATGAGCCCAGCAATGGGCACCATCACATGCAGGAacacacacctgcaacacacacac--gcacacaaacacagcaacacatacacatgcgacacaacacagacacacacaca--------------------gtgtgcatgatgcacacacac--gtacacaaggacaac-------acacacgtgacaccacacacatgaacaca-----------------------gtgtgcacgatgcacacacacatgcacacaagcacagcaacacgtaca--tgtgacac--cacacacacagtctgcaca i papAnu2.chr4 C 0 I 3 s chlSab2.chr13 96739114 438 + 98384682 AGGGGAAAACAAAACTAGCTTAACCAGTTCACTGCTAATTATTGCCTGTTAGCATGAGAAGAAGAGCACAATTCTTCACATTTTTGGTTAAGGAAAGGTTACCCACACATTCACATGTAAATTGATTCTGACCAAA----TTGGAGTGGGAATTTTAG-TTTATCTGTGAGCA--------CTGTCTCTCAGGGGCTGAGAATGAGCCCAGCAATGGGCACCATCACATGCAGGAacacacacctgcaacacacacac--gcacacaaacacagcaacacatacacatgcgacacaacacagacacacacaca--------------------gtgtgcatgatgcacacacat--gtacacaaggacaac-------acacacgtgacaccacacacatgaacaca-----------------------gtgtgcacgatgcacacacacatgcacacaagcacagcaacacgtaca--tgtgacac--cacacacacagtctgcaca i chlSab2.chr13 C 0 I 15 s calJac3.chr4 169948464 438 + 171630274 A--GGCAGACAAAGCTAGCGCGATCCGTTCACTGCTGATCATCGCCCGTTAGCATGAAAAGAGCAGCAGAGTTCTTCACATTTTTGGTTAAGGAAACTTTACCCGCACATTCACATGTGAGTCAATTCTGACCAAATTGTTTGGAGTGGGAATTTTAG-TTTATCTGTGAGCA--------CTGTCTCCCAGGGGCTGGGAAGGAGCCCAACGATGGGTACCATTGTATGCAGAAacacacacccacgacacacacac--gcacacagacacaGCAATGCCTATAAATGTGACCCcacacacatgcacacacatgcacacaacacagcaacatgtacacatataccacacacacatgcacacaaacacagcaacatgtacacatgcaacaccacacacac--acaaa-------------------------------------------------cacaaacacaGCAACACATACATATGTGACAC--CGTACACA-----TGCACA i calJac3.chr4 C 0 C 0 s canFam3.chr1 56220299 328 + 122678785 AGGAGGGAGCAAAGCCAGTGCAGCCAGCTTATTGCT-CTCATTGCCTGCAAGTGTGCACAG--TAACAAAACTCCTCACATGCTGGGTT-AGCACTAATTACCCACACATTGACACGTGAATTCATTCTGACCGGATTAGTTTAAGTGAAAATTTTAGTTTTATCAGAGAGCATAATGTCCCTGTCCCTTGGGGGTTG-----GAGCACATC-----------Tcacacacacatatactcccccccaccaatcacac--acatggaa-------------------------------------tacacgca-----------------------tacacaatacatgtatac------------------------acacat-----accaatcacat----gca-----------------------ggttgca---tgcacacacat-----------------------------------ac--cactcacaca---cacata i canFam3.chr1 I 1281 C 0 a score=19657.000000 s hg38.chr6_KB021644v2_alt 160638 21 + 185823 caagcacagcgacacatacac s panTro4.chr6 170750267 21 + 172623881 caagcacagcgacacatacac i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172506857 21 + 174210431 caaggacagcaacacagacac i ponAbe2.chr6 C 0 I 9 s nomLeu3.chr3 156366027 21 + 157873769 caagcacagcaacacatacac i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169137552 15 - 170955103 cacac------acacatacac i macFas5.chr4 I 3 C 0 s papAnu2.chr4 163954239 15 + 165299245 cacat------gcacatacac i papAnu2.chr4 I 3 C 0 s chlSab2.chr13 96739567 21 + 98384682 cacacacagcaacacatacac i chlSab2.chr13 I 15 I 9 s calJac3.chr4 169948902 20 + 171630274 -CAACACAGCAACATGTACAC i calJac3.chr4 C 0 I 2 s canFam3.chr1 56220627 2 + 122678785 ------------------ca- i canFam3.chr1 C 0 C 0 e rheMac3.chr4 168183543 27 + 169853907 I a score=-3993.000000 s hg38.chr6_KB021644v2_alt 160659 11 + 185823 gagatacaatg s panTro4.chr6 170750288 11 + 172623881 gagatacaatg i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156366048 7 + 157873769 aaaagac---- i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169137567 8 - 170955103 ---acacagca i macFas5.chr4 C 0 I 1 s papAnu2.chr4 163954254 8 + 165299245 ---acacagca i papAnu2.chr4 C 0 I 1 s calJac3.chr4 169948924 9 + 171630274 GTGACACca-- i calJac3.chr4 I 2 C 0 s canFam3.chr1 56220629 2 + 122678785 ---------tt i canFam3.chr1 C 0 C 0 e chlSab2.chr13 96739588 9 + 98384682 I e rheMac3.chr4 168183543 27 + 169853907 I e ponAbe2.chr6 172506878 9 + 174210431 I a score=22956.000000 s hg38.chr6_KB021644v2_alt 160670 16 + 185823 cacacacacaca---tgcg s panTro4.chr6 170750299 14 + 172623881 --cacacacaca---tgcg i panTro4.chr6 C 0 C 0 s nomLeu3.chr3 156366055 17 + 157873769 --cacacatacagtgtgca i nomLeu3.chr3 C 0 I 7 s rheMac3.chr4 168183570 14 + 169853907 --cacatacaca---caTG i rheMac3.chr4 I 27 I 4 s macFas5.chr4 169137576 14 - 170955103 --cacatacaca---tatg i macFas5.chr4 I 1 I 4 s papAnu2.chr4 163954263 14 + 165299245 --cacatacaca---tatg i papAnu2.chr4 I 1 I 4 s chlSab2.chr13 96739597 14 + 98384682 --cacatacaca---tatg i chlSab2.chr13 I 9 I 4 s calJac3.chr4 169948933 14 + 171630274 --cacacacaaa---aaca i calJac3.chr4 C 0 I 6 s canFam3.chr1 56220631 16 + 122678785 tatatagactca---tgca i canFam3.chr1 C 0 C 0 e ponAbe2.chr6 172506878 9 + 174210431 I a score=5808372.000000 s hg38.chr6_KB021644v2_alt 160686 1990 + 185823 cacacacacatg----------cacaca--cacagcaacacatacacatgtgacaccacacac--gcacgcacagtgtgcatgatgcacacaca--------cgcacgcacagcaacacgtacacatgtgacac----------cacgcacagtgtgcacagtgcacacacatgcacacacaccccacacacactcacatcacaACTAAAAGACTGAAGCATCGTCGAGAGGAAACCTTCCAAAGCCATTGTATCTGCAGTGATATTGCCtataaatctcagtccatgtatttagt-atgcaataactatcgctagccttattattgaaaatgctatttctttgtatttctgagctcaaatttcactaagattggggtaaacctaactttaattattcttCAGATGTA-------------TGCCTCAGTTTAGGAGACTTGCACGGGGCCAATAGGTTATTtacctagtatttatataatgctcacccagtgtcaggca--ctgcttcaaatgcttggtaaatattaactcatttaatccttacaataaatt---------------------------------------------------------------cagag---------------------------ggatgcgtggttttac----------------------------------------------------------------------------------------aaatgaggaagcttaagaacagagacgtgaagtaacttgcctaaggcgacatagcattaggaag-----ggagttggcatctgaactccttgcctggctccaaacctcatcctctCGGTCAGA----CCTCC-------TGAGGCCACAACATCTCTCTGCTCGCTTGGCCTTCTAGTTACAACACCCACCAGGCTGGGCCCCAGAACTATTTTGTGAAGG----TGTCTGTTGACCCGGTTTTCCTAAACACACCTTATATTCCTGTCTGATGCTTCTTTACTTCACGCCAAGAAGCAAAGGACTGTCTCCAACTGTCTCCAAATGCTTAGACCTCCCCTC-CGCACACGGAGGAGGGGTCTCCGTCTGTCATGGTGCTGGCATGCACCGGGGTCCTTTTTCTATCCCAG-CCACTTCCAAGATGCCCTTTCCAAGACTTACCTGGTTTACaaacaccgttcttttttgtctg---------aaaacttccaagttctcctgaaagcctaggctttggg-aagaccaattctt---------------gatatgc-----agctacttctgTGTGAAGAGTGAGAAGAGAAGGAGGCGGTGGCAGGGAGAGG-AAAACCCCGTGTGTGTGCACATTCCAAAACACCCACAGCCACAAACGGCAGATCCGATGTTTTATGGTACCTTTTTACTAAATGGTTGTGTTTCTTTCCTTCGTTCTACTGGCCCAAGTCCTAGGTGCTTACCACCATCAGCTGATGAGGAGGGCTCATTGGATGCTGCCGAGATTTGAAACA--AGAGTCTTCCAAACCAAGGTTTCAACTGTGAAGTCGTTTCTTGCTTAAAGGGCCAGTGGAATCTCCTTAAAAAGGAATGG-------AACATCTTAGCAC---------TCTGTATCTTTTGGCTGAGACGTATGCTTCAAAATAAGTGTTTTCCTGTAAACGGGTCCTTACTAAGTGTTGGGGTGAGTGAATATGTGCTCTTGAAATGTGTTATGGTGGAACGAAAGCTTCAGTCACCTGCAGACATTTCCCCGGCGGAGATA-AGCTTCTTCCAGTCTGGGCCTGGAG-TTTCCCTTACTCCATCGGAAAGGAACCCAGA---CTGGTGATAATGACAAGTTGGCAGTGTGGCTTTCATGCACCAGGG-CCAGTGATGGAAATACTCTCTTACCCGAGGCTCGCAGAATGCTATAAAC-TTGGGGATG----GAGGGGCCACAAT-GCTGGAGGGAAAAGCATAAAGCAGCCCGGAGACAAGAAACAGACTCGCCAATCAAATGCTGTGCCTTTTCCCTCGGTCCCAGGATGGCTGCCCTCATGATTCTGGTGTAGTCCCTGTCATCCAGCGCCACTGTGCCGGGCTGGCAATGCCAGTGCTCCATATTAGACAGAAGGACAAAGAAAGCTTTTAATTTAGTATCAGAGTAATGAAAACGCCTTCTTCCGCGGATACTGTAACACTGGCAGGGTTTTAAGTAAATGGAATCAGATATTTAAAAAGGATTTGCCGAAAGGAATT---AGG s panTro4.chr6 170750313 1981 + 172623881 --ggcacacatg----------cacaca--cacagcaacacatacacatgtgacaccacacac--gcacgcacaGTGTGCATGATGcaca------------------cacagcaacatgtacacatgtgacac----caca--cacgcacagtgtgcacagtgcacacacatgcacacacaccccacacacactcacatcacaACTAAAAGACTGAAGCATCGTCGAGAGGAAACCTTCCAAAGCCATTGTATCTGCAGTGATATTGCCtataaatctcagtccatgtatttagt-atgcaataactatcgctagccttattattgaaaatgctatttctttgtatttctgagctcaaatttcactaagattggggtaaacctaactttaattattcttCAGATGTA-------------TGCCTCAGTTTAGGAGACTTGCACGGGGCCAATAGGTTATTtacctagtatttatataattcttacccagtgtcaggca--ctgcttcaaatgctttgtaaatattaactcatttaatccttacaataaatt---------------------------------------------------------------cagag---------------------------ggatgcgtggttttac----------------------------------------------------------------------------------------aaatgaggaagcttaagaacagagatgtgaagtaacttgcctaaggcgacatagcattaggaag-----ggagttggcatctgaactccttgcctggctccaaacctcatcctctCGGTCAGA----CCTCC-------TGAGGCCACAACATCTCTCTGCTCGCTTGGCCTTCTAGTTACAACACCCACCAGGCTGGGCCCCAGAACTATTTTGTGAAGG----TGTCTGTTGACCCGGTTTTCCTAAACACACCTTATATTCCTGTCTGATGCTTCTTTACTTCACGCCAA-AAGCAAAGGACTGTCTCCAGCTGTCTCCAAATGCTTAGACCTCCCCTC-CGCACACGGAGGAGGGGTCTCCGTCTGTCATGGCGCTGGCATGCACCGGGGTCCTTTTTCTGTCCCAG-CCACTTCCAAGATGCCCTTTCCAAGACTTACCTGGTTTACaaacaccgttcttttttgtctg---------aaaacttccaagttctcctgaaagcctaggctttggg-aagaccaattctt---------------gatatgc-----agctacttctgTGTGAAGAGGGAGAAGAGAAGGAGGCGGCGGCAGGGAGAGG-AAAACCCCGTGTGTGTGCACATTCCAAAACACCCACAGCCGCAAACGGCAGATCCGATGTTTTATGGTACCTTCTTACTAAATGGTTGTGTTTCTTTCCTTCGTTCTACTGGCCCAAGTCCTAGGTGCTTACCACCATCAGCTgatgaggagggctcattggatgctgccgagatttgaaaca--agagtcttccaaaccaaggtttcgactgtgaagtcatttcttGCTTAAAGGGCCAGTGGAATCTCCTTAAAAAGGAATGG-------AACATCTTGGCAC---------TCTGTATCTTTTGGCTGAGACGTATGCTTCAAAATAAATGTTTTCCTGTAAACGGGTCCTTACTAAGTGTTGGGGTGAGTGAATATGTGCTCTTGAAATGTGTTAT-GTGGAACGAAAGCTTCAGTCACCTGCAGACATTTCCCAGGTGGAGATA-AGCTTCTTCCAGTCGGGGCCTGGAGTTTTCCCTTACTCCATCGGAAAGGAACCCAGA---CTGGTGATAATGACAAGTTGGCAGTGTGGCTTTCATGCACCAGGG-CCAGTGATGGAAATACTCTGTTACCCAAGGCTCGCAGAATGCTATAAAC-TTGGGGATG----GAGGGGCCACAAT-GCTGGAGGGAAAAGCATAAAGCAGCCCGGAGACAAGAAACAGACTCGCCAATCAAATGCTGTGCCTTTTCCCCCGGTCCCAGGATGGCTGCCCTCATGATTCTGGTGTAGTCCCTGTCATCCAGCGCCACTGTGCCGGGCTGGCAATGCCGATGCTCCACATTAGACAGAAGGACAAAGAAAGCTTTTAATTTAGTATCAGAGTAATGAAAACGCCCTCTTCCGCGGATACTGTAACACTGGCAGGGTTTTAAGTAAATGGAATCAGATATTTAAAAAGGATTTGCCGAAAGGAATT---AGG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172506887 1989 + 174210431 --cacacacaca----------tgcaca--cacagcaacacatacacatgtgacaccacacac--atgcatgcagtgtgcatgatgcacacaca--------cgcacacacagcaccatgtacacatgtgacaccacacaca--cacgcacagtgtgcacagtgcacacacatgcacaca-accccaaacacactcacatcacaACTAAAAGACTGAGGCATTGTCGAAAGGAAACCTTCCAAAACCATTGTATCCGCGGTGATATTGCCtataaatctcagtccatgtattcagt-atgcaataactatcactagccttattattgaaaatgccatttctttgtatttctgagctcaaatttcactaagattggggtaaacctaactttaattattctcgggatGTA-------------TGCCTCAGTTTAGGAGACTTGCACGGGGCCAATAGGTTATTTACTTAGTatttatataatgcttacccggtgtcagtca--ctgcttcaaatgctttgtaaatattaactcatttaatcttcacaataaatt---------------------------------------------------------------cagag---------------------------ggatgcgtggttttat----------------------------------------------------------------------------------------aaatgaggaagcttaagaacagagatgtgaagtaacttgcccaaggcgacatagcattaggaag-----ggagttggcatctgacctccttgcctggc-ccaaaactcatcctctcagtcaGA----CCTCC-------TGAGGCCAC--CATCTGTCTGCTTGCTTGGCCTTCTAGTTACAACACCCACCAGGCTGGGCCCCAGTACTATTTTGTGAAGG----TGCCTGTTGACCCGGTTTTCCTAAACATACCTTATATTCCTGTCTGATGCTTCTTTACTTCATGCCAGGAAGCAAAGGACTGTCTCCAACTGTCTCCAAATGCTTAAACCTCCCCTC-CTCACACGGAGGAGGGGTCTCCATCTGTCATGGCGCTGGCAAGCACCAGGGTCCTTTTTCTATCCCAC-CCACTTCCAAGATGCCCTTTCCAAGACTTACCTGGTTTACaaacactgttcttttttgtctg---------aaaactcccaagttctcctgaagacttaggctttggg-aagaccaattctt---------------gatatgc-----agctacttctATGTGAAGAGGGAGACGAGAAGGAGGAGGTGGCAGGGAGAGG-AAAACCCCGTGTGTCTGCACATTCCAAAACACCCACAGCCGCAAACGGCAGATCTGATGTTTTATAGTACCTTTTTACGAAATGGTTGTGTTTCTTTCCTTCGTTCTACTGGCCCAAGTCCTAGGTGCTTACCAC---CAGCTCATGAGGAGGGCTCATTGGATGCTGCCGAGATTAGAAACA--AGAGTCTTCCAAACCAAGGTTTCGACTGTGAAGTCATTTCTTGCTTAAAGGGCCAGTGGAATCTCCTTAAAAAGGAATGG-------AACATCTTAGCAC---------TCTGTATCTATTGGCTGAGACGTATGCTTCAAAATAAATGTTTTCCTGTAAACGGGTCCTTACTAAGTGTTGGGGTGAGTGAATATGTGCTCTTGAAATGTGCTATGGTGGAATGAAAGCTTCAGTCACCTGCAGACATTTCCCCGGCGGAGATA-AGCTTCTTCCAGTCCAGGCCTGGAG-TTTCCCTTACTCCATCAGAAAGGAACCCAGA---CTGGTGATAATGACAAGTTGGCAGTGTGGCTTTCATGCACCAGGG-CCAGTGATGGAAATACTCTATTACCCAAGGCTCGCAGAATGCTATAAAC-TTGGGGATG----GAGGGGCCACAAT-ACCGGAGGGAAAAGCATAAAGCAGCCTGGAGACAAGAAACAGACTCGCCAATCAAATGCTGTGCCTTTTCCCCTGTTCCCAGGATGGCTGCCCTCATGATTCTGGTGGAGTCCCTGTCATTCAGTGCCACTGTGCCAGGCTGGCAATGCCGGTGCTCTACATTAGATAGAAGGACAAAGAAAGATTTTAATTTAGTGTCAGAGTAATGAAAATGCCTTCTTCCATGGAAACTGTAACACTGGCAAGGTTTTAAGTGAATGGAATCAGATATTTAAAAAGGAGTTGCCAAAAGGAATT---AGG i ponAbe2.chr6 I 9 C 0 s nomLeu3.chr3 156366079 1962 + 157873769 --cacacataca----------tgcaga--cacagcaacacatacacatgtgacaccacacacatgcacgcacagtgtggatgatgcacacaca--------cgcacacacagcaacatgtacac--gtgatac------------------------------cacacacgtgcacacacaccccacacacactcacatcacaACTAAAAGACTGAGGCATTGTCGAAAGGAAACCTTCCAAAGCCATCGTATCCGCAGTGATATTGCCtataaatctcagtccgtgtattcagt-atgaaataactatcgctagccttattattgaaaatgctatttctttgtatttctgagctcaaatttcactaagattggggtaaacctaactttaattattcttgggatGTA-------------TGCCTCAGTTTAGGAGACTTGCACGGGGCCAATAGGTTATTTACCTGGTatttatataatgcttacccagtgtcaggca--ctgcttcaaatgctttgtaaatattaactcatttaatcctcacaataaatt---------------------------------------------------------------cagag---------------------------ggatgcgtggttttat----------------------------------------------------------------------------------------aaatgaggaagcttaagaacagagatgtgaagcaacttgcccaaggcaacatagcattaggaag-----ggagttggcatctgaactccttgcctggctccaaaactcatcctctcagtcaGA----CCTCC-------TGAGGCCAC--CATCTCTCTGCTCGCTTGGCCTTCTAGTTACAACACCCACCAGGCTGGGCCCCAGAACTATTTTGTGAAGG----TGCCTGTTGACCCGGTTTTCCTAAACACACCTTATATTCCTGTCTGATGCTTCTTTACTTCATGCCAGGAAGCAAAGGACTGTCTCCAACTGTCTCCAAATGCTTAGACCTCCCCTC-CACACACAGAGGAGGGGTCTCCATCTGTCACGGTGCTGGCATGCACCGGGCTCCTTTTTCTATCCCAC-CCACTTCCAAGATGCCCTTTCCAAGACTTACCTGGTTTACGAACACCGttctgttttgtctg---------aaaacttccaagttctcctgaaggcctaggctttggg-aagaccaattctt---------------gatatgc-----agctacttctgTGTGAAGAGGGAGAAGAGAAGGAGGAGGCAGCAGGGAGAGG-AAAACCCTGTGTGTGTGCACATTCCAAAACACCCACAGCCGCACACGGCAGATCCGATGTTTTATGGTACCTTTTTACTAAATGGTTGTGTTTCTTTCCTTCGCCCTACTGGCCCAAGTCCTAGGTGCTTACCAC---CAGCTGATGAGGAGGGCTCATACGATGCCGCCGAGATTTGAAACA--AGAGTCTTCCAAACCAAGGTTTCGACTGTGAAGTCATTTCTTGCTTAAAGGCACAGTGGAATCTCCTTAAAAAGGAATGG-------AACATCTTAGCAC---------TCTGTATCTTTTGGCTGAGACGTATGCTTCAAAATAAATGTTTTCCTGTAAACGGGTCCTTACTAAGTGTTGGGGTGAGTGAATATGTGCTCTTGAAATGTGTTATGGTGGAACGAAAGCTTCAGTCACCTGCAGACATTTCCCCAGCGGAGATA-AGCTTCTTCCAGTCCAGGCCTGGGG-TTCCCCTTACTCCATCGGAAAGGAAACCAGA---CTGGTGATAATGACAAGTTGGCAGTGTGGCTTTCATGCACCAGGG-CCAGTGATGCAAATACTCTATTACCCAAGGCTCGCAGAATGCTATAAAC-TTGGGGATG----GAGGGGCCACAAT-GCTGGAGGGAAAAGCATAAAGCTGCCCGGAGACAAGAAACAGACTCGCCAGTCAAACGCTGTGCCTCTTCCCCTG-TCCCAAGATGGCTGTCCTCATGATTCTGGTGGAGTCCCTGTCATCCAGCGCCACTGTGCTGGGCTGGCAACGCTGGTGCTCTCCATTCGCTAGAAGGACAAAGAAAGATTTTAATTTAGTATCAGAATGATGAAAACGCCTTCTTCCATGGAAACTGTAACACTGGCAGGGTTTTAAGTTAATGGAATCAGATATGTAAAAAGGATTTGCCGAAAGGAATT---AGG i nomLeu3.chr3 I 7 C 0 s rheMac3.chr4 168183588 1996 + 169853907 GACACACA-ATG----------CACACAAGCACAGCAACATGTA-ACATGTGACACCACACAT------GCACAGTGTGCGTGATGcacacatacacacatgcacacacacagcagcacatacacatgtgacaccacacacatgcacgcacaGTGTGCACAGTGCACATACATGCATACACACCCCCCACACACTCACATCACAACTAAAATACTGAGGCATCGTCCGGAGGAAACCTTTCAAAGTCATTGCATCCTCAATGATATTGCCtataaatctcagtccatgcattctgt-atgcaataactatccctagccttattactgaaaatgctatttctttgtatttctgagctgaaatttcactaagattggggtaaacctaactttaattattcttgggatGTA-------------AGCCTCAGTTTACGAGACTTGCACGGGGCCAATAGGTTATGtacctagtatttatataatgcttaccaggtgtcaggca--ctgcttcaaacgctttgtaaatattaactcatttaatctgcacaataaatt---------------------------------------------------------------cagag---------------------------ggatgtgtgattttat----------------------------------------------------------------------------------------aaatgaggaagcttaaggacagagatgtgaagtcacgtgcccaacgcgagacagcattaggaag-----acaagtggtctctgaacttcttgcctggctccaaagctcatcctctcagtcaGA----CCTCC-------TGAGGTCAC--CATCTCTCTGCTCGCTT-ACCTTCTAGTTACAACACCCACCAGGCCGGGCCCCAGAACTATTTTGTGAAAG----TGCCTGTTGACCCGGTTTTCCTAAACACACCTTATATTCCTGTCTGATGCTTCTTTACTTCATGCCAGGAAGCAAAAGACTGGCTCCAACTGTCTCCAAATGCTTAGACCTCCCCTC-CGCACACAGAGGAGAGGTCTCAGTCTGTCATGGTGCTGGCATGCCCTGGGGTCCTTTTCCTATCCCAC-CCGCTTCCAAGATGCCATTTCCAAGACTTACCTGGTTTACaaacaccgttcttttttgtctg---------aaaacttccaagttctcctgaaggcctaggctttgggaaagaccaattctt---------------gatatgc-----agctacttctgTGTGAAGAGGGAGAAGAGAAGGAGGAAGCGGCAGGGAGAGG-AAAACCCC--GTGTGTGCACATTCCAAAGCACCCACAGCCACAAACAGCAGATCTGATGTTTTATGATACCTTTTCACTAAATTATTGTGTTTCTTTCCTTCGTTCTACTGGCCCAAGTCCTAGATGCTTACCAC---CAGCTGATGAGGTGGGCTTATTGGATGCCGCCGAGATTTGAAACA--AGAGTCTTCCAAACCAAAGTTTCGACTGTGAAGTCATTTCTTGCTTAAAAGGCCAGTGGAATCTCCTTAAAAAGGAATGG-------AACATCTTAGCAC---------TCTGTATCTTTTGGCAGAGACGCAGGCTTCAAAATAAATGTTTTCCTGTAAACGGGTCCTTACTAAGTGTTAGGGTGAGTGAGTATGTGCTCTTGAAATGTGCTCTGGTGAAACGAAAGCTTCAGTCACCTGCAGACATTTCACCGATGGAGATA-AGCTTCTTCCAGTCCAGGCCTGGAG-TTTCCCTTACTCTATTGGAAAGGAACCCGGA---CTGGTGATAATGACAAGCCGGCAGTGTGGCTTTCATGCACCAGGG-CCAGTGATGGAAATACCCTATTACCCAAGGCTCGCAGAATGCTATAAAC-TTGGGGACG----GAGGGGCCACAAT-GCCGG-GGGAAAAGCACAAAGCAGCCTGGAGACAAGAAACAGACTCACCAATCAAACTCTGTGCCTTTTCCCCCGGTCCCAGGATGGCTGCCCTCATGATTCTGGTGGAATCCCTGTCCTCCAGCGCCACTGTGCTGGGCTGGCAACACCGGCGCTCTCCATTAGCTAGAAGGACAAAGAAAGATTTTAATTTAGTGTCAGAGTAAAGAAAATGCCTTCTTCCATGGAAACTGTAACACTGGCAGGGTTTTAAGTTAATGGAATCAGATATTTAAAAAGGATCTGCAGAAAGGAATT---AGG i rheMac3.chr4 I 4 C 0 s macFas5.chr4 169137594 1997 - 170955103 gacacacacatg----------cacacaagcacagcaacatgta-acatgtgacaccacacac------gcacagtgtgcgtgatgcacacatacacacatgcacacacacagcagcacatacacatgtgacaccacacacatgcacgcacagtgtgcacagtgcacacacatgcatacacaccccccacacactcacatcacaACTAAAAGACGGAGGCATCGTCCGGAGGAAACCTTTCAAAGTCATTGCATCCTCAATGATATTGCCTATAAATCTCAGTCCATGCATTCTGT-ATGCAATAACTATCCCTAGCCTTATTACTGAAAATGCTATTTCTTTGTATTTCTGAGATGAAATTTCACTAAGATTGGGGTAAACCTAACTTTAATTATTCTTGGGATGTA-------------AGCCTCAGTTTACGAGACTTGCACGGGGCCAATAGGTTATGtacctagtatttatataatgcttaccaggtgttaggca--ctgcttcaaatgctttgtaaatattaactcatttaatctgcacaataaatt---------------------------------------------------------------cagag---------------------------ggatgtgtgattttat----------------------------------------------------------------------------------------aaatgaggaagcttaaggacagagatgtgaagtcacgtgcccaacgcgagacagcattaggaag-----acaagtggcctctgaacttcttgcctggctccaaagctcatcctctcagtcaGA----CCTCC-------TGAGGTCCC--CACCTCTCTGCTCGCTT-ACCTTCTAGTTACAACACCCACCAGGCCGGGCCCCAGAACTATTTTGTGAAAG----TGCCTGTTGACCCGGTTTTCCTAAACACACCTTATATTCCTGTCTGATGCTTCTTTACTTCATGCCAGGAAGCAAAAGACTGGCTCCAATTGTCTCCAAATGCTTAGACCTCCCCTC-CGCACACAGAGGAGAGGTCTCAGTCTGTCATGGTGCTGGCATGCCCTGGGGTCCTTTTCCTATCCCAC-CCGCTTCCAAGATGCCATTTCCAAGACTTACCTGGTTTACAAACACCGTTCTTTTTTGtctg---------aaaacttccaagttctcctgaaggcctaggctttgggaaagaccaattctt---------------gatatgc-----agctacttctgTGTGAAGAGGGAGAAGAGAAGGAGGAAGCGGCAGGGAGAGG-AAAACCCC--GTGTGTGCACATTCCAAAGCACCCACAGCCACAAACAGCAGATCTGATGTTTTATGATACCTTTTTACTAAATTATTGTGTTTCTTTCCTTCGTTCTACTGGCCCAAGTCCTAGGTGCTTACCAC---CAGCTGATGAGGTGGGCTTATTGGATGCCGCCGAGATTTGAAACA--AGAGTCTTCCAAACCAAAGTTTCGACTGTGAAGTCATTTCTTGCTTAAAAGGCCAGTGGAATCTCCTTAAAAAGGAATGG-------AACATCTTAGCAC---------TCTGTATCTTTTGGCAGAGACGCAGGCTTCAAAATAAATGTTTTCCTGTAAACGGGTCCTTACTAAGTGTTAGGGTGAGTGAGTATGTGCTCTTGAAATGTGCTATGGTGAAACGAAAGCTTCAGTCACCTGCAGACATTTCACCGATGGAGATA-AGCTTCTTCCAGTCCAGGCCTGGAG-TTTCCCTTACTCCATTGGAAAGGAACCCGGA---CTGGTGATAATGACAAGCCGGCAGTGTGGCTTTCATGCACCAGGG-CCAGTGATGGAAATACCCTATTACCCAAGGCTCGCAGAATGCTATAAAC-TTGGGGACG----GAGGGGCCACAAT-GCCGG-GGGAAAAGCACAAAGCAGCCTGGAGACAAGAAACAGACTCACCAATCAAACGCTGTGCCTTTTCCCCCGGTCCCAGGATGGCTGCCCTCATGATTCTGGTGGAATCCGTGTCCTCCAGTGCCACTGTGCTGGGCTGGCAACACCGGCGCTCTCCATTAGCTAGAAGGACAAAGAAAGATTTTAATTTAGTGTCAGAGTAAAGAAAATGCCTTCTTCCATGGAAACTGTAACACTGGCAGGGTTTTAAGTTAATGGAATCAGATATTTAAAAAGGATCTGCAGAAAGGAATT---AGG i macFas5.chr4 I 4 C 0 s papAnu2.chr4 163954281 1962 + 165299245 gacacacacatg----------cacacaagcacagcaacatgta-acatgtgacaccacacac------acacagtgtgtgtgatgcacacatacacacatgcacacacacagcagcacatacacatgtgacaccacacacatgcacgcacagtgtgcacagtgcacacacatgcatacacacctcccacacactcacatcacaactaaaagactGAGGCATCGTCCAGAGGAAACCTTTCAAAGTCATTGCATCCGCAGTGATATTGCCTATAAATCTCAGTCCATGCATTCTGT-ATGCAATAACTATCGCTAGCCTTATTACTGAAAATgctatttctttgtatttctgagcTGAAATTTCACTAAGATTGGGGTAAACCTAACTTTAATTATTCTTGGGATGTA-------------AGCCTCAGTTTAGGAGACTTGCACGGGGCCAATAGGTTATGTACCTAGTAATTATATAATGCTTACCAGGTGTCAGGCA--CTGCTTcaaatgctttgtaaatattaactcatttaatctgcaCAATAAATT---------------------------------------------------------------CAGAG---------------------------GGATGTgtgattttat----------------------------------------------------------------------------------------aaatgaggaagctTAAGGACAGAGATGTGAAGTCACGTGCCCAACGCGAGACAGCATTAGGAAG-----ACAAGTGGCCTCTGAACTTCTTGCCTGGCTCCAAAGCTCATCCTCTCAGTCAGA----CCTCC-------TGGGGTCAC--CATCTCTCTGCTCGCTT-ACCTTCTAGTTACAACACCCACCAGGCCGGGCCCCAGAACTATTTTGTGAAAG----TGTCTGTTGACCCGGTTTTCCTAAACACACCTTATATTCCTGTCTGATGCTTCTTTACTTCATGCCAGGAAGCAAAGGACTGGCTCCAACTGTCTCCAAATGCTTAGGCCTCCCCTC-CGCACACAGAGGAGAGGTCTCGGTCTCTCATGGTGCTGGCATGCCCTGGGGTCCTTTTCCTATCCCAC-TCGCTTCCAAGATGCCATTTCCAAGACTTACCTGGTTTACAAACACCGTTCTTTTTTGTCTG---------AAAACTTCCAAGTTCTCCTGAAGGCCTAGGCTTTGGGAAAGACCAATTCTT---------------GATATGC-----AGCTACTTCTGTgtgaagagggagaagagaaggaggaagtggCAGGGAGAGG-AAAACCCC--GTGTGTGCACATTCCAAAGCACCCACAGCCACAAACAGCAGATCTGATGTTTTATGATACCTTTTTACTAAAttattgtgtttctttccttCGTTCTACTGGCCCAAGTCCTAGGTGCTTACCAC---CAGCTGATGAGGTGGGCTTATTGGATGCCGCCGAGATTTGAAACA--AGAGTCTTCCAAACCAAAGTTTCGACTGTGAAGTCATTTCTTGCTTAAAAGGC------------------------------------------ATTAC---------TCTGTATCTTTTGGCAGAGACGCAGgcttcaaaataaatgttttcctgtAAACGGGTCCTTACTAAGTGTTAGGGTGAGTGAGTATGTGCTCTTGAAATGTGCTATGGTGGAACGAAAGCTTCAGTCACCTGCAGACATTTCCCCGATGGAGATA-AGCTTCTTCCAGTCCAGGCCTGGAG-TTTCCCTTACTCCATTGGAAAGGAACCCGGA---CTGGTGATAATGACAAGCCGGCAGTGTGGCTTTCATGCACCAGGG-CCAGTGATGGAAATACCCTATTACCCAAGGCTCGCAGAGTGCTATAAAC-TTGGGGACG----GAGGGGCCACAAT-GCCGG-GGGAAAAGCACAAAGCAGCCTGGAGACAAGAAACAGACTCACCAATCAAATGCTGTGCCTTTTCCCCCGGTCCCAGGATGGCTGCCCTCATGATTCTGGTGGAATCCCTGTCCTCCAGCGCCACTGTGCTGGGCTGGCAACGCCGGTGCTCTCCTTTAGCTAGAAGGACAAAGAAAGATTTTAATTTAGTGTCAGAGTAAAGAAAATGCCTTCTTCCATGGAAACTGTAACACTGGCAGAGTTTTAAGTTAATGGAATCAGATATTTAAAAAGGATCTGCAGAAAGGAATT---AGG i papAnu2.chr4 I 4 C 0 s chlSab2.chr13 96739615 1995 + 98384682 gacacacacatg----------cacacaagcacagcaacatgta-ac--gtgacaccacacac------gcacagtgtgcgtgatgcacacatacacacatgcacacacacagcagctcgtacacatgtgacaccacacacatgcaagcacagtgtgcacagtgcacacacatgcatacacacc-cccacacactcacatcacaACTAAAAGACTGAGGCATCGTCCAGAGGAAACCTTTCAAAGTCATTGCATCCGCAATGATATTGCCtataaatctcagtccatgcattctgt-gtgcaataactatcgctagccttattactgaaaatgctatttctttgtatttctgagctgaaatttcactaagattggggtaaacctaactttaattattcttgggatGTA-------------TGCCTCAGTTTAGGAGACTTGTACGGGGCCAATAGGTTATGtacctagtatttatataatgcttaccaggtgtcaggca--ctacttcaaatgctttgtaaatattaactcatttaatctgcacaataaatt---------------------------------------------------------------cagag---------------------------ggatgtgtgattttat----------------------------------------------------------------------------------------aaatgaggaagcttaaggacagagatgtgaagtaacgtgcccaaggcgagacagcattaggaag-----acaagtgtcatctgaacttcttgcctggctccaaagctcatcctctcagtcaGA----CCTCC-------TGAGGCCAC--CATCTCTCTGCTCGCTT-ACCTTCTAGTTACAACACCCACCAGGCCGGGCCCCAGAACTATTTTGTGAAAG----TGCCTGGTGACCCGGTTTTCCTAAACACACCTTATATTCCTGTCTGATGCTTCTTTATTTCATGCCTGGAAGCAAAGAACTGGCTCCAACGGTCTCCAAATGCTTAGACTTCCCCTC-TGCACACAGAGGAGAGGTCTCGGTCTGTCATGGTGCTGGCATGCACTGGGGTCCTTTTCCTATCCCAC-CCACTTCTAAGATGCCATTTCCAAGACTTACCTGGTTTACAAACACCGTTCTTTTTTGtctg---------aaaacttccaagttctcctgaaggcctaggctttgggaaagaccaattctt---------------gatatgc-----agctacttctgTGTGAAGAGGGGGAAGAGAAGGAGGAAGTGGCAGGGAGAGG-AAAACCTCATGTGTGTGCACATTCCAAAGCACCCACAGCCACAAACAGCAGATCTGATGTTTTATGATACCTTTTTACTAAATTAGTGTGTTTCTTTCCTTGGTTCTACTGGCCCAAGTCCTAGGTGCTTACCAC---CAGCTGATGAGGTGGGCTTATTGGATGCCGCCGAGATTTGAAACA--AGAGTCTTCCAAACCATAGTTTCGACTGTGAAGTCATTTCTTGCTTAAAAGGCCAGCGGAATCTCCTCAAAAAGGAATGG-------AACATCTTAGCAC---------TCTGTATCTTTTGGCAGAGACGCAGGCTTCAAAATAAATGTTTTCCTGTAAACGGGTCCTTACTAAGTGTTAGGGTGAGTGAGTATGTGCTCTTGAAATGTGCTATGGTGGAATGAAAGCTTCAGTCACCTGCAGACATTTCCCCGATGGAGATA-AGCTTCTTCCAGTCCAGGCCTGGAG-TTTCCCTTACTCCACTGGAAAGGAACCCGGA---CTGGTGATAATGACAAGCCGGCAGTGTGGCTTTCATGCACCAGGG-CCAGTGATGGAAATACCCTATTATGCAACGCTTGCAGAATGCTATAAAT-CTGGGGACG----GAGGGGCCACAAT-GCCGG-GGGAAAAGCACAAAGCAGCCTGGAGACAAGAAACAGACTCACCAGTCAAACGCTGTGCCTTTTCCCCC-GTCCCAGGATGGCTGCCCTCATGATTCTGGTAGAATCCCTGTCCTCCAGCGCCACTGTGCTGGGCTGGCAACGCCGGCGCTCTCCATTAGCTAGAAGGACAAAGAAAGATTTTAATTTAGTGTCAGAGTAATGAAAATGCCTTCTTCCTTGGAAACTGTAACACTGGCAGGGTTTTAAGTTAATGGAATCGGATATTTAAAAAGGATCTGCAGAAAGGAATT---AGG i chlSab2.chr13 I 4 C 0 s calJac3.chr4 169948953 1978 + 171630274 cacatatacatgtgataccacacacacaaacatatcaacacatgcacatgtgactccacacac----atacacggtatccacaatgcacacaca--cacatacacaagcacagcaacacggacgcatgtgatgc------------------------------cacacacacatgcacacaccccacacacactcacaTCACAACTGAAA-ACTG--GTGTCATGGAGAGGAAACCTTTCAAAGCCGTCATATCCACAATGACACTGCCTGTAGGTCTCAGCCCATGTATTCAGT-ATGCAATAAATCTTGCGACCCTTATTATTGAAAATGCTATTTCTTTGTGTTTCTGAGCTCAAATTTCACTAAGATTGGGATAAACCTAACATTAATTATTCTTGGTAT-TA-------------TGCCTCAGTTTAGGAGTTTTGCATGGGGCCAATAGGTTATTtacctagcatttataaaatgcttaccaggtgtcaggca--ctgtttcaaatgctttgtaaatattagctcatttaatcctcacattaaatt---------------------------------------------------------------cagag---------------------------ggatgtgtgattttat----------------------------------------------------------------------------------------aaatgagggagcttaggaacagagacgtgaagcaacttgcccaaggccacacagcactaggaag-----ggaggtggtgtctgaacttctcacctggctccaaagctcgtcctctCTGTAAGACCCCCCCCC-------TGAGGCCAC--CATCTCTCTGCTTGCTTAGCCTTCAAGTTACAACAGCCACCAGGCTGGGCCCCAGAACTATTTTGTGAAGG----TGCCTGTTGACCCAATTTGCCTAAACACCATTCGTATTCCTGCCTGAAGCTTCTTTACTTAATGCCAGGAAGCAACGGACAGGTTCAGACTGCCTCCAAACGCCTAGACCTCCCC-C-TGCACATGGAGGAGGAGTGTCTGTGTGTCATGGTGCTGGTGTGCACCGAGGTCCTTTT-CTATCCCAC-CCACTTCCAAGATGCTCTTTCCAAGACTTACCTGGTTTACAAACACCGTTATTTTTTGTCTG---------GAAACTTACAAGTTCTTCTGAAGGCCGAGGCTTTGGG-AAGACCAATTCTTGATACACAAATTCTCGATATGC-----TGCTACTTCTGTGTGAAGAGGGAAAAGAGAAGGAGGAAGCTGCAGAGAGAGGAAAAATCTCCTGTGTGTACACATTCCAAAGCACC--CAGCTGCAAACGGCGGATCTTACGTTTTA---TATCTTTTTACTAAATTATTGTGTTTCTTTCCTTC-TTCTACTGGCCCGAGTCCGAGATGCTTACCGT---GAGCTGATGAGATGAGCCCACTGGATGCCACCAAGATTTGAAACA--AGAGTCTCCCAAACCAGAGTTTTGACTGTGAAGTCATTTCTTGCT--AAGAGTCAGT-GAATCTCCCTGAAAAGAAATGGATGTCGTAGCATGCTAACGC-------TATCTGTATCTTTTGGCTGAGACGTATGCGTCCAAATGAGTGTTTGCCTGTAAACGGGTCCTTACTAAGTGTTAGCGTGCATGAGTACGTGCTCTTGAAATGTGCTTTGGTGGAATGAAAGCTTCAGCCACCTGCAGACATTTCCCTGAAGAGGATA-GGCTTCTTCCAGTCCAG---------CTTCCCTTCCTCCATCGGAAAGGAACCCAGAGATCCTGTGGTAACGACAAGGTGGCAGTGTGGCTTTCATGGACCAATG-CCAGTGACGGAAATGTCCTACAAC-CAAGGCTCGCAGAATGCTATAAAC-TTGGGGACAGACTGAGGGGCCACAATGGCCAG-AGGAAAAGCATAAAGCAGCCTGGAGACAAGAAACAGAATCAACGATCAAACGCTGTCCCTGTTACCC-GGTCCCAGGATGGCTGTCCTCATGATTCTGGCAGAGTCTCCGCCACCCAGA------GTGC--ATCTGGCCATGCTGGTGCTTCC------ATAGCCAGACAGACAAAGATTTTAATTTCGTGTCAGAATAACGAAAATGTCTTCTTTCCTGGAAGCTGTAACACCTGCAGGGTTTTGAGTAAATGCAATCAGATATTTAACAAGAATCTTCAGGAAGGAATT---GAG i calJac3.chr4 I 6 C 0 s canFam3.chr1 56220647 1973 + 122678785 ------------------------------cac----acaTCTA-------------GCACAC---------CAGTAACATTCATGCACAGACT----------------------------CACATTT-----------------------------------------CATGATTGTA------------AGTCTGGGCATAATTTAAA--------CATCATC-----AAAAATTTTGAAAGACTTTCTATGTGCAGGGGTATTGCgtgtaaatctcagcctatgtgttgagcgatgcaagaaatatcatt-gccttattatctaaaatgccacttc-----atgtctaatctccattctaa--aaaactgg--caaatcaaac--caattattcttgaaatccacattcccaggcattgcctca-tttaggagtcttgcacggtgccaTTAGGTTATCtaacaaatatttatacaaccctt--tatgtatttggcatgccattccaggtgctttgtcaatattaactca-ttaatcctcatggcaaatttattttttattttttaaagatttatttattcatgagagagagagagagaggcagagacacaggcagagggagaagcaggatccccacagggagccggatgtgggactcgatcccggatactcagatcacaccctgagccgaaggcagacgcttaaccgctgaaccacccaggtgtccccctcatgggaaatttagtgagaaacgaggatgcttgggaacagggtcgttcc-tgacatgcctgaggccacagagc---tggaagttggtggcagtggagtctgaactc---agctgg-tgcagcgct-gtcctcccaagcaGA----CCTCTCCCGAGATGAGATCAC--CCTCT-------------GCCTGCCGGTTACGCCA--CAGCGGGCTGGGACCTGGAATTCTCTGGGGAAAGTGGCTGGCTGTCGTCCCCGTTTTCCCA---ACACCTCATATTCCTGCTTCGCATTCCTTCATTTCATGCCAGGAAGCAAAAGGCTGCTTCTGCCCACCTTCAGAGTCCTAGACCTCCCCTCACTCCCACAGGGGAGCA-----------------------CCTGGACCCGGGGCCTTTC-CTACCCCATGAAATTTCCAAGA--CTCTTTTCAAA---TACCTAATTTTCAAACTCCGTTTCCCTTTCTTTTAACTCTTCCAAAACTTTCAAGTTTTCCGAAAGCCTTCAACATTGGG-GAGAC--ATCCTT---------------GGGAAGCTTGCAGGCCACTTCCATGGGAAAGAGGAGATG-------GGACCCTGCAG---GAGG-GACACTCC-TGAGCGTGTGGGTCTCACGCCAGC--CAGCCACA---GGTGCATCTGGC---CTATGGTATCTTCTCTTTGCATT-CTACACTTCCTTCCTTC-TTTTGTTGGCCAAAATCTTAGATGCTTACCAT---GGGCCATTGAGACAGATTTGT-GGGTACTGCCAAGATTGGAAACAGCAAAATGTTCCAAACCAAGCTTTTGACTACTAAGCCCTTTTTTGCTT----GGCCAGTGGGATAG-CTTGGAAAGGAAC---------ACCATCTCAGCACAGCACACCATTGATACCTTCTGGCTGAAAAGTAGATTTCTCACTGAACGATTTCCCAGACGAGGGTCCTCAGTGAGTGCCGAGGTGAGCG----TGTAACCTCTAGTGGTGCTCTCACGA--------CTTCTGTCAGTGGTGCATGTTTTCCCACACGAGGTACGGATTCTGCAAGTCCAGGCGTGAAA-TTTCCCTGAAACC-TGGAGAAAGAACTCAGTGTTCCAGTGGCACTGACACATTGTCAGCTTGGCTTCCATACACCATGGTCCAGTGACGGGAACAC-CTAGTACCCAAGGCATACAGAGTGCCGTAAATAGCGAGGCCG----AAGGTCCCAGGGTTCCCTGAGGCAAAACCATACAGCAGCCTGGAGACAGGAGACAGACTTGACAACCCAATGTTCAGCCTTTTCCCAT--CCCAAGGGTTTCTGCTTTAGTTACCTGGATTGAGTTCCAGCCA-CCAGC--------------------ACGTTCCTGTTCTCCATTACGGGGAAGTAGAGAGAAGCACTTTGACTCAGTGTCTGAATAATGCAGAAGGCTTCAGCCATAGAAGCCAT-TTACCTGTAGAATGCCAGGTGAATTAGCATAGATATTAATAAGGAATCTATAAAAAATAATTTTCAgg i canFam3.chr1 C 0 I 192 a score=993918.000000 s hg38.chr6_KB021644v2_alt 162676 335 + 185823 AAAGAATGCTTCAAAAACATTTTAAATGCTGCTTAGTAGAGGCTCAGTGTTCACCTAAATCAAAG--ATGTTTTCCCCATATATTTATTTTAATAATTTAAAATATGTCTAC------ATGTACTAATTACCTATATTTATCTA---------------------------------------------------------------------TCTGAATTT-----------------------TTTCTTCAATGACCAATATACAATGAGTGGTATATACTGCATGTGTACTGTTTTAAAGACATACTGTATATTTAGGAAAAGGGGTTTCACATTTCTGCCACTTTGTGGATCCCTCTGCTTGGCTATCTTTTTAA---------ATTTATAGGCCTTATTTCCCATTAAGACTGGAACACCTTCCAAAATATTTTCTTTT s panTro4.chr6 170752294 335 + 172623881 AAAGAATGCTTCAAAAACATTTCAAATGCTGCTTAGTAGAGGCTCAGTGTTCACCTAAATCAAAG--ATGTTTTCCCCatatatttattttaacaatttaaaatatGTCTAC------ATGTGCTAATTACCTATATTTATCTA---------------------------------------------------------------------TCTGAATTT-----------------------TTTCTTCAATGACCAATATACAACGAGTGGTATATACTGCATGTGTACTGTTTTAAAGACATACTGTATATTTAGGAAAAGGGGTTTCACATTTCTGCCACTTTGTGGATCCCTCTGCTTGGCTATCTTTTCAA---------ATTTATAGGCTTTATTTCCCATTAAGACTGGAACACCTTCCAAAATATTTTCTTTT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172508876 329 + 174210431 AAATAATGCTTCAAAAACATTTTAAATGCTGCTTAGTAGAGGCTCAGTTTTTACCT-AATCAAAGATATGTTTTCCTCatatattta----aataatttaaaatatGTCTAC------ATGTACTAATTATCTATATTTATCTA---------------------------------------------------------------------TCTGAATTT-----------------------TTTCCTCAATGACCAATATACAATGAGTGGTATATACTGCATGTGTACTGTTTTAAAGACATACTGTATATTTAGGAAAAGGGGTTTCACATTTCTGCCACTTTGTGGATCCCTCTGCTTGGCTATCTTTTTAA---------ATTTATAGGCCTTATTTCCCATTAAGACTGGAACACCTTCCAAAATATT---TTTT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156368041 325 + 157873769 ACAGAATGCTTCAAAAACATTTTAAATGCCGCTTAGTAGAGGCTCCGTGTTTACCTAAATCAAAGATATGCTTTCCCTATATATTTATTTTAATAATTTAAAATATGTCTAC------ATGTACTAA----------TTATCTA---------------------------------------------------------------------TCTGAATTT-----------------------TTTCCTCAATGACCAATATACAATGAGTGGTATATACTGCATGTGTACTGTTTTAAAGACATACTGTATATTTAGGAAAAGAGGTTTCACATTTCTGCCACTTTGTGGATCCCTCTGCTTGGCTATCTTTTTAA---------ATTTATAGGCCTTATTTCCCACTAAGACTAGAACAGCTTCCAAAATATAT--ATTT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168185584 336 + 169853907 A-AGAATGCTTCAAAAACATTTTAAATGCTGCTTAGTAGATGCTCAATGTTTACCTAAATCAAAGATGTGGTTTGCCCatatatttattttaataatttaaaatatGTCTAC------ATGTACTAATTATCTATATTTATCTA---------------------------------------------------------------------TCTGAATTT-----------------------TTTCCTCGATGACCAATACACAACGAGTGGCATATGCTGCGTGTGTACTGTTTTAAAGACATAATGTGTATTTAGGAAAAGAGCTTTCACATTGCTGCCACTTTGTGGATCACTCTGCTTGGCTATCTTTTTAA---------ATTTATAGGCCTTATTTCCCATTAAGACTGGAACACCTTCCAAAATATTTTCTTTT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169139591 336 - 170955103 A-AGAATGCTTCAAAAACATTTTAAATGCTGCTTAGTAGATGCTCAATGTTTACCTAAATCAAAGATGTGGTTTGCCCAtatatttattttaataatttaaaatatgtctac------atgtactaattatctatatttatCTA---------------------------------------------------------------------TCTGAATTT-----------------------TTTCCTCAATGACCAATACACAACGAGTGGCAAATGCTGCGTGTGTACTGTTTTAAAGACATAATGTGTATTTAGGAAAAGAGCTTTCACATTGCTGCCACTTTGTGGATCACTCTGCTTGGCTATCTTTTTAA---------ATTTATAGGCCTTATTTCCCATTAAGACTGGAACACCTTCCAAAATATTTTCTTTT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163956243 336 + 165299245 A-AGAAtgcttcaaaaacattttaaatgctgCTTAGTAGATGCTCAATGTTTACCTAAATCAAAGATGTGGTTTgcccatatatttattttaataatttaagataTGTCTAC------ATGTACTAATTATCCATATTTAtcta---------------------------------------------------------------------tctgatttt-----------------------tttcctcaatgaCCAATACACAATGAGTGACATATGCTGCATGTGTACTGTTTTAAAGACATAATGTATATTTAGGAAAAGAGCTTTCACATTACTGCCACTTTATGGATCACTCTGCTTggctatctttttaa---------atttataggcCTTATTTCCCATTAAGACTGGAACAccttccaaaatgttttctttt i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96741610 336 + 98384682 A-AGAATGCTTCAAAAACATTTTAAATGCTGCTTACTAGATGCTCAATGTTTATGTAAATCAAAGATGTGGTTTGCCCATATATTTATTTTAATAATTTAAAATATGTCTAC------ATGTACTAATTATCTATATTTATCTA---------------------------------------------------------------------TCTGAGTTT-----------------------TTTCCTCAATGATCAATATGCAATGCGTGACATATGCTGCGTGTGTACTGTTTTAAAGACATAATGTATATTTAGGAAAAGAGGTTTCACATTTCTGCCACTTTGTGGATTGCTCTGCTTGGCTATCTTTTTAA---------ATTTATAGGCCGTATTTCCCATTAAGACTGGAACACCTTCCAAAATGTTTTCTTTT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169950931 332 + 171630274 AAAGAATGCTTCAAAAACATTTTAAATGCTGTTTAGTAGAGGCTCAGTGTCTACTT-AATC-AAGATATGATTTCCCAGtttatttattttaataattttaaatatGTCTAC------ATGCACTAATTTTCTATGTTTATCTA---------------------------------------------------------------------TCTGAGTTT-----------------------TTTCCTCAATGAGCAATGTACAATGCATAGCATGTACTGCATTTGTACTATTTTAAAGACATAATGTATATTTAGGAAAACAGGGTTCATGTTTCTGCCGCTTTGTGGATCCCTCTGCTTTGCTACATTTTTAG---------ATTTATAGGCCTTAATTTCCG-TAAGATTGGAACACCTTCCAAAATATTC--TTTT i calJac3.chr4 C 0 C 0 s canFam3.chr1 56222812 437 + 122678785 AAAGAGTGCTTTGAAATTTTTTAAAAAGCTATTTAGCAGAAGTTCAGAATTCAAATAAACCAAAGATGTGATTTT----TATGTTTACTTAAATAATTCAAAATGTACCTACTCACATATATACCAGCTGTGTGTATATATCCACATATGCACGCATGTATATTATCCTATTATATTTATTATGTACAAATGCTAtgaatccttgtgaatccttgtgaatctcttgtgCTGTAAGTCATAGTACATTTCCCCGGTGAACCATGCACA--GGAGAACAGGTACGG-ATGCTCACTATTTAAAGGAGAACGTGTACATTTAGGGAAAGAAGTTTCATGTTTGTGTTACTTTCTGGATGTCTCTGCCTGGTTAACCATTTCACGTTATAGGGTCTACAGGTCTTCATCCTCACTGAGGCAGAAACACCTTCCAAAATGTGCTCTTCC i canFam3.chr1 I 192 I 187 a score=205459.000000 s hg38.chr6_KB021644v2_alt 163011 68 + 185823 TTTAGACATCTATAATAAGATGAAATAACAGTAGT-GGCAAATTCACTGCGCTCTTGAAGCATCTGTTG s panTro4.chr6 170752629 68 + 172623881 TTTAGACATCTGTAATAAGACAAAATAACAGTAGT-GGCAAATTCACTGCGCTCTTGAAGCATGCGTTG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172509205 68 + 174210431 TTTAGACATCTATAATAAGACGAAATAACAGTAGT-GGCAAATTCACTGCGCCCTTGAAGTATGTGTTG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156368366 68 + 157873769 TTTAGACATCTATAATAAGACAAAATAACAGTAGT-GGCAAATTCACCGCACTCTTGAAGCATGCATCG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168185920 68 + 169853907 TTTATACATCTATAATAAGACCAAATAACAGTAGT-GGCAAATTCACCACGCTCTTGAAGCATGCATTG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169139927 68 - 170955103 TTTATACATCTATAATAAGACCAAATAACAGTAGT-GGCAAATTCACCATGCTCTTGAAGCATGCATTG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163956579 68 + 165299245 tttatacatCTATAATAAGACCAAATAACAGTAGT-GGCAAATTCACCATGCTCTTGAAGCATGCGTTG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96741946 68 + 98384682 TTTGTACATCTATAATAAGACCAAATAACAGTAGT-GGCAAATTCACTGTGCTCTTGAAGCATGCGTTG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169951263 69 + 171630274 TTTAGACATCTATAATAAGATAAAATAACAGTAGCAGGCAGAGTCACTGCACTTTTGAAGTCTGGGTTG i calJac3.chr4 C 0 C 0 s canFam3.chr1 56223436 69 + 122678785 TTTAAGCATCTATGATAAGAATAAACATCAGTATTAGCCAAAATCATGGCAATTCTGTATTTTCAATTG i canFam3.chr1 I 187 I 572 a score=2006302.000000 s hg38.chr6_KB021644v2_alt 163079 689 + 185823 GAGCTCTCTCTTTGTGGGGGTAAACCAGCCGCCAAAC--AGATCACCTGCACGGAAAGTCCTTTGCTCATTTTGTGGATCTGAGTTGCTGCCAACTTTTCCGGGTGTTCATGTTCAGAAGGAGAAGCAAGATGGCCCTGTTAAAAAGTCCTACATGGCATTTGTCAAGGATGTTCTGCTCAGGAGAGAGACTGAGGCTTCCGGTGAGAAAACCCTGCAGGCTGGGGAAGTGCACCTCGAGCTGACCCCTTGTTC-AGGGAGCTGATGAAGGCACATGCCATGGGAATGAGAAAGCCACTCCTTAAGCATCAGTAACAGAAGGTGCCATGTGGATAATACAGGGGCTGAAAAATCATAAGATTAtttgggtgtccccacccaaatctcatctcgaattcccacatgttgtgggaggaatctggtgggaggtgattgaatcatgggggcaggtctctcctgggctgttcttatgat-------------------cgtgagtgggtctcatgagatctgatggttttaaaaacaggagtttccctgcacaagctctcttctcttgtctgccaccatgtgagacatgcctttcacattccgccatgattttgaggcctccccagccacacagaactgg--gtccattgaacc--tctcttttgtaaattgcccagtctcaggtatgtctttatcagcagcatgaaaacacactaatac s panTro4.chr6 170752697 689 + 172623881 GAGCTCTCTCTTTGCAGGGGTAAACCAGCCGCCAAAC--AGATCACCTGCGCGGAAAGTCCTTTGCTCATTTTGTGGATCTGAGTTGCTGCCAACTTTTCCGGGTGTTCATGTTCAGAAGGAGAAGCAAGATGGCCCTGTTAAAAAGTCCTACATGGCATTTGTCAAGGATGTTCTGCTCAGGAGAGAGACTGAGGCTTCCGGTGAGAAAACCCTGCAGGCTGGGGAAGTGCAGCTCGAGCTGACCCCTTGTTC-AGGGAGCTGATGAAGGCACATGCCATGGGAATGAGAAAGCCACTCCTTAAGCATCAGTAACAGAAGGTGTCATGTGGATAATACAGGGGCTGAAAAATCATAAGATTAtttgggtgtccccacccaaatctcatctcgaattcccacatgttgtgggaggaatctggtgggaggtgattgaatcatgggggcaggtctctcctgggctgttctcatgat-------------------tgtgagtgggtctcatgagatctgatggttttaaaaacaggagtttccctgcacaagctctcttctcttgtctgccaccatgtgagacatgcctttcacattccgccatgattgtgaggcctccccagccacacagaactgg--ttccattgaacc--tctcttttgtaaattgcccagtctcaggtatgtctttatcagcagcatgaaaacacactaatac i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172509273 687 + 174210431 GAGCTCTCTCTTTGCAGGGGTAAACCAGTCGCCAAAC--AGATCACCTGCACAGAAAGTCCTTTGCTCATTTTGTGGATCTGAGTTGCTGCCAACTTTTCCGTGTGTTCATGTTCAGAAGGAGAAGCAAGATGGCCCTGTTAAAAAGTCCTACATGGCATTTGTCAAGGATGTTCTGCTCAGGAGAGAGACTGAGGCTTCAGGTGCAAAAACCCTGCAGGCTGGGAAAGTGCAGCTCGAGCTGACCCCTTGTTT-GGGGAGCTGATGAAGGCACATGCCACAGGAATGAGAAAGCTACTCCTTAAGCATCAGTAACAGAAGGTGTCATGTGGATAATATAGAGGCTGAAAAATCATAAGATTAtttgggtgtccccacccaaatctcatctcgaattcccacatgttgtgggaggaatctggt-ggaggtgattgaatcatgggggcaggtctctcctgggctgttctcatgat-------------------tgtgagtgggtctcacgagctctgatggttttaaaaacaggagtttccctgcataagctctcttctcttgtctgccaccatgtgagacgtgcctttcacattccgccatgactgtgaggcctccccagccacacacaactgg---tccattgaacc--tctcttttgtaaattgcccagtctcaggtatgtctttatcagcagcgtgaaaacacactaatac i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156368434 689 + 157873769 GAACTCTCTCTTTGCAGGGATAAACCAGCCACCAAAC--AGATCACCTGCATGGAAAGTCCTTTGCTCATTTTGTGGATCTGAGTTGCTGCCAACTTTTCCGTATGTTCATGTTCAGAAGGAGAAGCAAGATGGCCCTGTTAAAAAGTCCTACATGGCATTTGTCAAGGACATTCTGCTCAGGAGAGAGACTGAGGCTTCAGGTGTGAAAACCCTGCAGGCTGGGGAAGTGCAGCTCGAGCTGACCCCTTGTTT-GGGGAGCTGATGAAGGCACATGCCGCGGGAATGAGAAAGCTACTCCTTAAGCATCAGTAACAGAAGGTGTCATGTGGATAATATAGGGGCTGAAAAATCATAGGATTAtttgggtgtccccacccaaatctcttcttgaattcccacatgttgtgggagggacctggtgggaggtgattgcatcatgggggcaggtctctcctgggctgttctcacgat-------------------catgagtgggtctcacgagatctgatggttttaaaaacaggagtttccctgcacaaactctcttctcttgtctgccaccatgtgagacgtgcctttcacattctgccatgattgtgaggcctccccagccacgcagaactgg--gtccattaaacc--tctcttttgtaaattgcccagtctcaggtatgtctttatcagcagcatgcaaacacactaatac i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168185988 689 + 169853907 GAACTCTCTCTTTGCACGGGTAAACGGGCCGCCAAAC--AGATCACCTGCGTGGAAAGTCCTTTGCTCATTTTGTGGATCTGAGTTGCTGCCAACTTTTCCGTGTGCTCATGTTCTGAAGGAGAAGCAAGACGGCCCTGTTAAAAAGTCCTACTTGGCATTTGTCAAGGACGTTCTGCTCAGGAGAGAGACTGAGGCTTCACGTGTGAAAACCCTGCAGGCTGGGGAAGTGCAGCTCGAGCTGACCCCTTGTTC-GGGGAGCTGATGAAGACACACACCACGGGAATGAGAAAGCTACTCCTTAAGCATCAGTAACAGAGGGTGTCATGTGGATAATACAGGGGCTGAAAAATAATAAGATTAtttgggtgtccccacccaaatctcatcttgaattcccacatgttgtaggagggacctggtgggaggtgattgaatcatgggggcaggtctttcctgtgctgttctcatgac-------------------catgagtgggtctcacgagatatgacggttttaaaaacagggggttccctgcacaagctctcttctcttgtctgccaccatgtgagacatgcctttcacattctgccatgattgtgaggcctctccagccacacagaactgt--gtccattaaacc--tctcttttgttaattgcccagtctcaggtatgtctttatcagcagcatgaaaacacactaatac i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169139995 689 - 170955103 GAACTCTCTCTTTGCACGGGTAAACGGGCCGCCAAAC--AGATCACCTGCGTGGAAAGTCCTTTGCTCATTTTGTGGATCTGAGTTGCTGCCAACTTTTCCGTGTGCTCATGTTCTGAAGGAGAAGCAAGACGGCCCTGTTAAAAAGTCCTACTTGGCATTTGTCAAGGACGTTCTGCTCAGGAGAGAGACTGAGGCTTCATGTGTGAAAACCCTGCAGGCTGGGGAAGTGCAGCTCGAGCTGACCCCTTGTTC-GGGGAGCTGATGAAGACACACACCACGGGAATGAGAAAGCTACTCCTTAAGCATCAGTAACAGAGGGTGTCATGTGGATAATACAGGGGCTGAAAAATAATAAGATTAtttgggtgtccccacccaaatctcatcttgaattcccacatgttgtaggagggacctggtgggaggtgattgaatcatgggggcaggtctttcctgtgctgttctcatgac-------------------catgagtgggtctcacgagatctgacggttttaaaaacaggggtttccctgcacaagctctcttctcttgtctgccaccatgtgagacatgcctttcacattctgccatgattgtgaggcctctccagccacacagaactgt--gtccattaaacc--tctcttttgttaattgcccagtctcaggtatgtctttatcagcagcatgaaaacacactaatac i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163956647 691 + 165299245 GAACTCTCTCTTTGCACGGGTAAACGAGCCGCCAAGC--AGATCACCTGCACGgaaagtcctttgctcattttgtGCATCTGAGTTGCTGCCAACTTTTCCATGTGCTCATGTTCTGAAGGAGAAGCAAGATGGCCCTGTTAAAAAGTCCTACTTGGCATTTGTCAAGGACGTTCTGCTCAGGAGAGAGACTGAGGCTTCATGTGTGAAAACCCTGCAGGCTGGGGAAGTGCAGCTTGAGCTGACCCCTTATTT-GGGGAGCTGATGAAGACACATGCCATGGGAATGAGAAAGCTACTCCTTAAGCATCAGTAACAGAGGGTGTCATGTGGATAATACAGGGGCTGAAAAATAATAAGATTATTTGggagtccccacccaaatctcatcttgaattcccacatgttgtaggagggacctggtgggaggtgattgaatcatgggagcaggtctttcctgtgctgttctcaggAC-------------------CGTGAgtgggtctcacgagatctgacggttttaaaaacaggggtttccctgcacaagctctcttctcttgtctgccaccatgtgagacatgcctttcacattctgccatgattgtgaggcctctccagcgaCACAGAACTgt--gtccattaaacctttttcttttgtaaattgcccagtcccaggtatgtctttatcagcagcatgaaaacacacTAATAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96742014 707 + 98384682 GAACTCTCTCTTTGCACGGGTAAATGGGCCGCCCAAC--AGATCACCTGCACGGAAAGTCCTTTGCTCATTTTGTGGATCTGAGTTGCTGCCAACTTTTCCGTGTGCTCATGTTCTGAAGGAGAAGCAAGATGGCCCTGTTAAAAAGTCCTACTTGGCATTTGTCAAGGACGTTCTGCTCAGGAGAGAGACTGAGGCTTCATGTGCGAAAACCCTGCAGGCTGGGGAAGTGCAGCTCGAGCTGACCCCTTGTTC-AGGGAGCTGATGAAGGCACATGATATGGGAATGAGAAAGCTACTCCTTAAGCATCAGTAACAGAGGGTGTCACGTGGATAACACAGGGGCTGAAAAATAATAAGATTATTTAGgtgtccccacccagatctcatgttgaattcccacatgttgtaggagggaccaggtgggaggtgattgaatcatgggggcaggtctttcctgtgctgttctcatgaccatgagtgggtctcatgatcatgagtgggtctcacgagatctgacggttttaaaaacaggggtttccctgcacaagctctcttctcttgtctgccaccatgtgagacatacctttcacattctgccatgattgtgaggcctctccagccacacagaactgt--gtccattaaaca--tctcttttgtaaattgcccagtctcaggtatgtctttatcagca-catgaaaacacactaatac i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169951332 668 + 171630274 GAACTCTCTCTCTGCACAGGTAAC---GCTGCCAACCTGAGATCACCTGCGAAGAATGTCCTTTGCTCATTTTGTGGATCTGAGTTGCCGCCAACTTTTCCGTG-GTTCATGTTCAGAAGGAGAAGCAAGATGGCCTTGCTGACAAGTCCTACTTGGCATTTGTCAAGGATGTTCTACTCCGCAGAGAGACTGAGGCTTCAGGCATGAAAACCATGCAGGCTGGGGAGGGGCAGCTGGAGCCGACCCGTTGTTCAGGGGAGCCGATG--------------GGGAATGAGA-------CCCTTAAGCACCAGCAACGCAGGGTGTCCTGAGGATAATGTAGAGGCAGAAAAATAATAAGattgttggggtgtccccacccaaatctcatcctgaa-tctcacatgttgt-gaagggacctggtgggaggtgattgaatcatgtgggcaagtctttcccatgctgttctcatgat-------------------agtgagtgggtctcacaagatctgatgcttttaaaaacggggctttccctgcacaagctctcttctcttgtctgccaccatgtgagatgtgccttccgccttccaccacgattgtgaggcctccccagccacgtggaactgtgagtccattaaacctctttcttctgtaaattgccca-tcttggatatctgtttctcagcagtgtgaaaacgcaggaatac i calJac3.chr4 C 0 C 0 e canFam3.chr1 56223505 572 + 122678785 I a score=2913077.000000 s hg38.chr6_KB021644v2_alt 163768 940 + 185823 aGGTAGGTTCAGACAAAGAGTCATTGGCTCCACATGGTGGCAGCTCCTATGCCTCCTGCCTGAGCTGAGGGTCTGTGGCTGCAGG------CCCAGCTCAGGAAA---------------GGAGCTGCTGGAAAC------------------------TGGAATGATATGAAATAGACCCATCTACAGTTTTTCTGGTCATCTGTTAAAAAAGAATTTAATGCTTACAAGATAACTATCATTGGTAGTAATA-GTCTAGGCCCATGACATTCTTTAATATTTGGGAGTATCAGAACTTTAAAGATTAGACTTAGTTATAAATAGAA----TATTTATTTAGGAACTTAGAGACATCTGGGCATTTCATGTCATGAAAGTAACAAAACCCTCCCTCTTTGCACGGCTCCAGTACAAATCATGACTGCTG--TTGGAGAGGCTCTGATA-CGCTGTGCGTGCAGATGGTGCCCGAGAGCCGGGGAACAGCAGCATC---------TCACCCGGGCTTTCTCCTTTC---------------------------CATCTGGCAGGTGCCAGCT-TCTAACCACC--ATCAGCTGCCATGTCCACTGCCATCTGTTTAGCTAATGGACAGGGAGCACCTACTGTGGGCCAAGCCCC-CGACAGGCACCAGAGATTGGGTGGAGAT-AGACAAAACCAA-GCACAGACAAATTCAATTAGTTGTTTTCTGGAGGAAAGAAACAAGAACCATGCATGAGAACATCTTGTTCTTGACATCTTCA--ACCAGAC-------ACTGAGGTCGGCTCTCGTCAGCAGCTGGGTCTCCTTGAGGTTCACTGGATGGGGAGGTTGTCTGCATTTCACGTTTTAATTAATTTTTAAAAGTTACTTAGATGAATTATTTCATTGGCTACGTATCATCCTGTGCCAAAAAACAAACTGTG-AAGCCCAGCAGCATA-TATATTTTA-AAATGCAGTTacaaaaaagcataaatatgaaaacaaaaac-aaacaactaaCCATTATTGATTGTGTCATACTAA s panTro4.chr6 170753386 936 + 172623881 aGGTAGGTTCAGACAAAGAGTCATTGGCTCCACCTGGCAGCAGCTCCTACGCCTCCTGCCTGAGCTGAGGGTCTGTGGCTGCAGG------CCCAGCTCAGGAAA---------------GGAGCTGCTGGAAAC------------------------TGGAATAATATGAAATAGACCCATCTACAGCTTTTCTGGTCATCTGTTAAAAAAGAATTTAATGCTTACAAGATAACTATCATTGGTAGTAATA-GTCTAGGCCCATGACATTCTTTAATATTTGGGAGTATCAGAAATTTAAAGATTAGACTTAGTTATAAATAGAA--------TATTTAGGAACTTAGAGACATCTGGGCATTTCATGTCACGAAAGTAACAAAACCCTCCCTCTTTGCACGGCTCCAGTACAAATCATGACTGCTG--TTGGAGAGGCTCTGATA-CACTGTGCGTGCAGATGGTGCCCGAGAGCAGGGGAACAGCGGCATC---------TCACCCGGGCTTTCTCCTTTC---------------------------CATCTGGCAGGTGCCAGCT-TCTAACCACC--ATCAGCTGCCATGTCCACTGTCATCTGTTTAGCTAATGCACAGGGAGCACCTACTGTGGGCCAAGCCCC-CAACAGGCACCAGAGATTGGGTGGAGAC-AGACAAAACCAA-GCACAGACAAATTCAATTAGTTGTTTTATGGAGGAAAGAAACAAGAACCATGCATGAGAACATCTTGTTCTTGACATCTTCA--ACCAGAC-------ACTGAGGTCGGCTCTCATCAGCAGCTGGGTCTCCTTGAGGTTGACTGGATGGGGAGGTTGTCTGCATTTCACGTTTTAATTAATTTTTAAAAGTGACTTAGATGAATTATTTCATTGGCTACTTCTCATCCTGTGCCAATAAACAAACTGTG-AAGCCCAGCAGCATA-TATATTTTA-AAATGCAGTTACAAAAAAGCATAAATATGAAAACAAAAAC-AAACAACTAACCATTATTGATTGTGTCATACTAA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172509960 941 + 174210431 aGGTAGGTTCAGACAAAGAGTCGTTGGCTCCACATGGCGGCAGCTCCTACGCCTCCTGCCTGAGCTGAGGGTCTGTGGCTGCAGG------CCCAGCTCAGGAAA---------------GGAGCTGCTGGAAAC------------------------TGGAATGATAGGAAATAGTCCCATCTACAGTTTTTCTGGTCATCTGTTAAAAAAGACTTTAATGCTTACAAGATAACTATTATTGGTAGTAATA-GTCTAGGCCCATGACATTCTTTAATATTTGGGAGTATCAGAAATTTAAAGATTAGACTTAGTTATAAATAGAA----TATTTATTTAGGAACTTAGAGACATCTGGGCATTTCATGTCATGAAAGTAACAAAACCCTCCCTCTTTGCACGGCTCCAGTACGAATCATGACTGCTG--TTGGAGAGGCTCTGATA-CGCTGTGCATGCAGATGGTGCCCGAGAGCCAGGGAACAGCGGCATC---------TCACCCAGGCTTTCTCCTCTC---------------------------CATCTGGCAGGTGCCAGCT-TCTAACCACC--ATCGGCTGCCATGTCCACTGTCATCTGTTTAGCTAATGGACAGGGAGCACCTACTGTGGGCCAAGCCCC-CGACAGGCACCAGAGATTGGGTGGAGAC-AGACAAAACCAA-GCACAGACAAATTCAATTAGTTGTTTTATGGAGGAAAGAAACAAGGACCACGCATGAGAACAGCTTGTTCTTGACATCTTCA--ACCAGAC-------ACTGAGGTCAGCTCTCGTCAGCAGCTGGGTCTCCTTGAGGTTGACTGGATGGAGAGGTTGTCTGCATTTCACGTTTTAATTAATTTTTAAAAGTTACTTAGATGAATTATTTCATTGGCTATTTCTCATCCTGTGCCAATAGACAAATTGTG-AAGCCCAACAGCATA-TATATTTTA-AAATGCAGTTACAAAAAAGCATAAATATGAAAACAAAAACAAAACAACTAACCATTATTGATTGTGTCATACTAA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156369123 940 + 157873769 aGGTAGGTTCAGGCAAAGAGTCATTGGCTCCACATGGCGGCAGCTCCTGTGCCACCTGCCTGAGCTGAGGGTCTGTGGCTGCAGG------CCCAGCTCAGGGAA---------------GGAGCTGCTGGACAC------------------------TGGAATGATATGAAATAGTCCCATCTACAGTTTTTCTGGTCATCTGTTAAAAAAGACTTTAATGCTTACAAGATAACTATTATTGGTAGT-ATA-GTCTAGGCCCATGACATTCTTTAATATTTGGGAATATCAGAAATTTAAAGATTAGACTTAGTTATAAATAGAA----TATTTATTTAGGAACTTAGAGACATCTGGGCATTTCATGGCATGAAAGTAACAAAACCCTCCCTCTGTGCACTGCTCCAATACGAATCATGACTGCTG--TTGGAGAGGCTCTGATA-CGCTGTGCGTGCAGATGGTGCCTGAGAGCCGGGGAACGGCAGCATC---------TCACCCAGGCTTTCTCCTTTC---------------------------CATCTGGCAGGTGCCAGCT-TCTAAGCACC--ATCGGCTGCCATGTCCACTGTCATCTGTTTAGCTAATGGACAGGGAACACCTACTATGGACCAAGCCCC-CGACAGGCACCAGAGACTGGGTGGAGAC-AGACAAAACCAA-GCACAGACAAATTCAATTAGTTGTTTTATGGAGGAAAGAAACAAGGACCATGCATGAGAACAGCTTGTTCTTGACGTCTTCA--ACCAGAC-------ACTGAGGTCAGCTCTCGTCAGCAGCTGGGTCTCCTCGAGGTTGGCTGGATGGGGAGGTTGTCTGCATTTCATGTTTTAATTAATTTTTAAAAGTTACTTAGATGAATTATTTAATTGGCTATTTCTCATCCTGTGCAAATAGACAAATTGTG-AAGTCCAGCAGCGTA-TATATTTTA-AAATGCAGTTATAAAAAAGCATAAATTTGAAAACAAAAACAATACAACGAACCATTATTGATTGTGTCATACTAA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168186677 970 + 169853907 aGGTGGGTTTAGACAAAGAACTGTTGGCTCCACATGGTGGCAGCTCCTGTGCCTCCCGCCTGAGCTGAGGGTCTGTGGCTGCAGG------CCCAGCTCAGGAAA---------------GGAGCTGCTGGAAAC----------------------TGTGGAATGAAATGAAATAGTCCCATCTACAGTTTTTCTGGTCATCTGTTGAAAAAGACTTCAATGCTTACAAAATAACTGTTATTGGTGGTAATA-GTCCAGGCCCACGACATTCTTTAATATTCGGGAGTATCAGAAATTTAAAGATTAGACTTAGTTATCAATAGAA----TATTTATTTAGGAACTTAGAGACATCTGGGCATTTCATGTAATGAAAGTAGCAAAATCCTCCCTCTTTGCACGGCTCTAGTACGAATCATGACTGCTA--TTGGAGGGGCTCTCATA-CTCTGTGCGTGCAGATGGTGCCTGAGAGCCGGGGGACGATGGTGTC---------TGGCCTTGTCCTTCTCCTTTCCACATCTGGCAGGTGCCAGCTTCTAACCATCTGGCAGGTGCCAGCT-TCTAACCAGC--ATCGGCTGCCATGTCCACTGTCATCTGTTTAGCTAATGGACAGGGAGCACCTACTGTGGGCCAAGCCTC-CAACAGGCACCAGAGATTGGGTGGAGAC-AGACAAAACCAA-GCCCAGACAAATTCAATTAGTTGTTTTATGGAGGAAAGAAACAAGGACCATGCATGAGAACAGCTTGTTCTTGACGTCTTCA--ACCAGAC-------ACTGAGGTCAGCTCTCGTCAGCAGCTGGGTCTCCTTGAGGTTGGCTGGATGGGGAGGTTGTCTGCATTTCACGTTTTAATTAATTTGTAAAAGTTACTTAGATGAACTATTTCATTGGCTATTTCTCATCCTGTGCCAGTAGAGAAATTGTG-AATCCCAACAGCATA-TATATTTTA-AAATGCAGTTATAAAAAAGCATAAATACGAAAACAAAAGCAAAACAACTAACCATTATTGATTGTGTCATACTAA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169140684 968 - 170955103 aGGTGGGTTCAGACAAAGAACTGTTGGCTCCACATGGTGGCAGCTCCTGTGCCTCCCGCCTGAGCTGAGGGTCTGTGGCTGCAGG------CCCAGCTCAGGAAA---------------GGAGCTGCTGGAAAC----------------------TGTGGAATGAAATGAAATAGTCCCATCTACAGTTTTTCTGGTCATCTGTTGAAAAAGACTTCAATGCTTACAAAATAACTGTTATTGGTGGTAATA-GTCCAGGCCCATGACATTCTTTAATATTCGGGAGTATCAGAAATTTAAAGATTAGACTTAGTTATCAATAGAA----TATTTATTTAGGAACTTAGAGACATCTGGGCATTTCATGTAATGAAAGTAGCAAAATCCTCCCTCTTTGCACGGCTCTAGTACGAATCATGACTGCTA--TTGGAGGGGCTCTCATA-CTCTGTGCGTGCAGATGGTGCCTGAGAGCCGGGGGACGATGGTGTC---------TGGCCTTGTCCTTCTCCTTTC--CATCTGGCAGGTGCCAGCTTCTAACCATCTGGCAGGTGCCAGCT-TCTAACCAGC--ATCAGCTGCCATGTCCACTGTCATCTGTTTAGCTAATGGACAGGGAGCACCTACTGTGGGCCAAGCCTC-CAACAGGCACCAGAGATTGGGTGGAGAC-AGACAAAACCAA-GCCCAGACAAATTCAATTAGTTGTTTTATGGAGGAAAGAAACAAGGACCATGCATGAGAACAGCTTGTTCTTGACGTCTTCA--ACCAGAC-------ACTGAGGTCAGCTCTCGTCAGCAGCTGGGTCTCCTTGAGGTTGGCTGGATGGGGAGGTTGTCTGCATTTCACGTTTTAATTAATTTGTAAAAGTTACTTAGATGAACTATTTCATTGGCTATTTCTCATCCTGTGCCAGTAGAGAAATTGTG-AATCCCAACAGCATA-TATATTTTA-AAATGCAGTTATAAAAAAGCATAAATACGAAAACAAAAGCAAAACAACTAACCATTATTGATTGTGTCATACTAA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163957338 968 + 165299245 AGGTGGGTTCAGACAAAGAACTGTTGGCTCCACATGGTGGCAGCTCCTGTGCCTCCCGCCTGAGCTGAGGGTCTGTGGCTGCAGG------CCCAGCTCAGGAAA---------------GGAGCTGCTGGAAAC----------------------TgtggaatgaaatgaaatagtCCCATCTACAGTTTTTCTGGTCATCTGTTGAAAAAGGCTTCAATGCTTGCAAAATAACTGTTATTGGTAGTAATA-GTCCAGGCCCACGACATTCTTTAATATTCGGGAGTATCAGAAATTTAAAGATTAGACTTAGTTAtcaatagaa----tatttatttaggaACATAAAGACATCTGGGCATTTCATGTAATGAAAGTAGCAAAACCCTCCCTCTTTGCACGGCTTTAGTACGAATCGTGACTGCTA--TTGGAGAGGCTCTCATA-CTCTGTGCGTGCAGATGGTGCCTGAGAGCCGGGGGACGATGGTGTC---------TTGCCTGGGCTTTCTCCTTTC--CATCTGGCAGGTGCCAGCTTCTAACCATCTGGCAGGTGCCAGCT-TCTAACCAGC--ATCGGCTGCCATGTCCACTGTCATCTGTTTAGCTAACGGACAGGGAGCACCTACTGTGGGCCAAGCCCC-CAACAGGCACCAGAGATTGGGTGGAGAC-AGACAAAACCAA-GCCCAGACAAATTCAATTAGCTGTTTTatggaggaaagaaacaaagaccATGCATGAGAACAGCTTGTTCTTGACGTCTTCA--ACCAGAC-------ACTGAGGTCAGCTCTCGTCAGCAGCTGGGTCTCCTTGAGGTTGACTGGATGGGGAGGTTGTCTGCATTTCacgttttaattaatttttaaaagttacttagaTGAATTATTTCATTGGCTATTTCTCATCCTGTGCCAGTAGAGAAATTGTG-AATCCCAacagcata-tatatttta-aaatgcagttataaaaaagcataaatacgaaaacaaaagcaaaacaactaaCCATTATTGATTGTGTCATACTAA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96742721 942 + 98384682 aGGTGGGTTCAGACAAAGAACTGTTGGCTCCACATGGTGGAAGCTCCTATGCCTCCCCCCTGAGCTGAGGGTCTGTGGCTACAGG------CCCAGCTCAGGAAA---------------GGAGCTGCTGGAAAC----------------------TGTGGAATGAAATGAAATAGTCCCATCTACAGTTTTTCTGGTCATCTGTTGAAAAAGACTTCAGTGCTTACAAAATAACTGTTATTGGTGGTAATA-GTCCGGGCCCATGACATTCTTTAATATTCAGGAGTATCAGAAATTTAAAGATTAGACTTAGTTATCAATAGAA----TATTTATTTAGGAACTTAGAGACATCTGGGCATTTCATGTAATGAAAGTAGCAAAATCCTCCCTCTCTGCACGGCTCTAGTACGAATCATGACTGCGG--CTGGAGAGGCTCTCATG-CTCTGTGCGTGCAGATGGTGCCTGAGAGTCAGGGGATGACGGTGTC---------TTGCCTTGTCTTTCTCCTTTC---------------------------CATCTGGCAGGTGCCAACT-TCTAACCAGC--ATC-GCTGCCATGTCCACTGTCATCTGTTTAGCTAATGGACAGGGAGCACCTACTGTGGGCCAAGCCCC-CAACAGGCACCAGAGATTGGGTGGAGAC-AGACAAAACCAA-GCCCAGACAAATTCAATTACTTGTTTTATGGAGGAAAGAAACAAGGACCATGCATGAGAACAGCTTGTTCTTGACGTCTTCA--ACCAGAC-------ACTGAGGTCAGCTCTCGTCAGCAGCTGGGTCTCCTTGAGGTTGACTGGATGGGAAGGTTGTCTGCATTTCACATTTTAATTAATTTTTAAAAGTTACTTAGATGCATTATTTCATTTGCTATTTCTCATCCTGTGCCAGTAGAGAAATTGTG-AAGCCCAACAGCATA-TATATTTTA-AAATGCAGTTATAAAAAAGCATAAATAGGAAAACAAAAGCAAAACAACTAACCATGATTGATTGTGTCATACTAA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169952000 934 + 171630274 aGGTAGGTTCTGACAAAGAGCTGTTAGCTCCACATGGTGGCAGCTCCTGGGCCTCCAGCCTGAACTGAGGGTCTGTGGCTGCAGG------CCCAGCTCAGGGCA---------------GGAGCTACTAGAAAC----------------------TGGGGAATGACAGGAAATAGTCCCTTGTGCAGTTTTTCTGGTCATCTGTTAAAAAAGCCTTTAATGCTTATAAGATAACTATTATTGGTAGTAATA-GTCCATGCCCATGACATTCTTTAATGTTCAGGAGTATCAGAAATTTAAAGATTAGACTTAGTTATAAATAGAA----TGTTTATTTAGGAACTTGGAGACATCTGGACATTTCACATCATGAAAGTAACAAAACCCTCCCTCTTTTTGTGGCTCCAGGAAGAATACTGACTGCTG--TGGGAGAGGTTCTCACG-CACTGTGGGTACTGATGGTGCCCGAGAGCCGGGGAACGGCGGCGTC---------TCGCCCGGACTTCCTCCTTCC---------------------------CATATGGCAGGTGCCAGCC-TCTAACTGCC--GTCAGCTGCCACCTCCAC-GCCATCTGTTTAGCTGACGGACAGGGAGCACCTACTGTGGGCCAAGCCCC-CAACAGGCACCAGAGATTGGGTGGAGAC-AGACGAAACCAAGGCACAGACACATTCAATTAGTCGTTTTATGGAGGAAAGAAGCAAGGACCACGCAGGAGAACAGCTTGTTCTTGACGTCTTCA--AGCAGAC-------ACTGAGGTCAGCTCT--TTAG--GCTGGGTCTCCTCGAGGTTGACCGGATGGGAAGGTTGTCTGCAAGTCACGTTTTAATTAATCTTTACAAGTTACTCAGATGAACTATTCCATTGGCTCTTTCTCATCCTGTGCCAGGAGACAAATTGTG-AAGCCCAGCAGCATACTCTGTTTTA-AAATGCAGTTATAAAAAGGAATAAAT------ACAAAAACAAAGCAGCCATCCATTATTGATTGTTTTATGCTAA i calJac3.chr4 C 0 C 0 s canFam3.chr1 56224077 962 + 122678785 AGGTAAGTGCAAGCAAAGGGCTGTGGGCTCC---------CAGACCGAGGGCCCCATGCCTG--CTTA---TCCACGGCCACAGGACAAATTCCAGATCAGAGAACTGCAAGTTGGACATGGACGTGTGAGAAACTGTAAACCTGAGTGCTTTAAAATGTGGAGTGACTAGAAGCAGTTTGATCTATAATATCACTGATCACCCGTTAAAAAAGACGTAAGTGT--------CGGCCTTTACTAATAGTAGCAGGTCCAGGTCTGTGGCACTGGTTATGATGCAAGACCATATGCaatttttaaattatatttagttacacatataattaatatttatttaGGAACTTTGGAACTGCTGGGTATTTCGTGGGATGCAAGTAA-GCAAGCAGCCCTCTCTTGA-GGCTGCAGAGTGCGTGATGCATCCCGGCTGGGAGAGGACGGCACGTTTCTGGGCTTGCAGA----GTCTGCAAAGTCGGGAGCAGCGGTGCCCCATGGAGTTCGTTCTGGCCTTCTTCACTC---------------------------CACAGGGCAAGTCCCAGCTCTCTCTCCTCCAGATCGG-GGCTACATCAGGGATCAT-TATTCA-CTTAGAAATTGtgagcacctactgtgtgccaagccccgtggcaggcatcagagaa-gacaggagacaagaGAATACAAA-GCACAGACAGATCCAAACAGTAGGTTTA--GTGGAGACAGACATCGGCCC--CAATAGGACAGCAGGT--CTGGCTTCCTCAGGACCAGATGGAGGTGGATGGGGTAAAATTTCCTTAGGACTGAGCTCTCCTCCATGTCACCTGG--GAAAGGGGTGCCTACATGTCACACATAACTGATGTTTTTAGAGTTACTTA-----ACTATTTTATTGGCTGTTTCTCTCTTTGTGCCAATAAACAAATTGTGAAAACCCAGTAGCACACTATGTTTAAGAAATGCAGCTTTAAAAAGGTATAAAAATGAAA---------ATACAAAGGGTCATT----ATTGTGCTCTACTAA i canFam3.chr1 I 572 I 812 a score=1775026.000000 s hg38.chr6_KB021644v2_alt 164708 583 + 185823 AA-CACTGTTTTAATTTTGTGGTATGT-TTTGGGGACTTTTTCCAATTTATTCTCTGAAATAATGTTGTATTCAGAGCGTACACCAAGAATAGGAGCCCGTTT-TTTATCCATTTAAGATT-CTCTCCC--GTTTCTATCTATTGCTCATTTG----------------------CTGAACCTCTTGTCTCTTTGACTAACAGTA-----TTTAAAGGTCTAATGAAATATTTCAAAGCAGTTATGAATAATGAGGTAAT--------AGATGAGTACA-----AGCCACTAGCAGAAGACATGAAATGTGGCAAATGCTG-CAAAGCAAAGGCTTCACTTCCATCGCTGccttctcccattcctcaagttatcactgactgcattggtgtttattcttcccaaacatctattcgtattttactacaaatgtatggagg-cttgtgcaatatttgatattgatc--------ta---tttttttaatgtgtataaggggaatcttacattatacatttttcatgactggcttcatatgttaaacatgttcctcatgagattaattcaggttgaggtgtgtagacactgttta----------------tttattaccacatcaatgaatgcattactattcacacagtccagtgtttt s panTro4.chr6 170754322 588 + 172623881 AA-CACTGTTTTAATTTTGTGGTATGT-TTTGGGGAATTTTTCCAATTTTTTCTCTGAAATAATGTTGTATTCAGAGCATACACCAAAAATAGGAGCCTGTTT-TTTATCCATTTAAGATT-CTCTCCC--GTGTCTGTCTATTGCTCATTTG----------------------CTGAACCTCTTGTCTCTTTGACTAACAGTATTTATTTTAAAGGTCTAATGAAATATTTCAAAGCAGTTATGGATAATGAGGTAAT--------AGATGAGTACA-----AGCCGCTAGCAGAAGACATGAAATGTGGCAAATGCTG-CAAAGCAAAGGCTTCACTTCCATCGCTGccttctcccattcctcaagttatcactgactgcattggtgtttattcttcccaaacatctattcgtattttactacaaatgtatggagg-cttgtgcaatatttgatattgatc--------ta---tttttttaatgtgtataaggggaatcttacattatacatttttcatgactggcttcgtatgttaaacatgttcctcgtgagattaattcaggttgaggtgtgtagacactgttta----------------tttattaccacatcaatgaatgcattactattcacacaatccagtgtttt i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172510901 589 + 174210431 AA-CACTGTTTTAATTTTGTGGTATGT-TTTGGGGAATTTTTCCAATTTATTCTCTGAAATAATGTTGTATTCAGAGCATACACCAAAAATAGGAGCCTGTTT-TTTATCCATTTAAGATT-CTCTCTCCAATGTCTATCTATTGCTCATTTG----------------------CTGAACCTCTTGTCTCTTTGACTAACAGTATTTATTTTAAAGGTCTAATGAAA-ATTTCAAAGCAGTTATGAATAATGAGGTAAT--------AGATGAGTATA-----AGCCACTAGCAGAAGACATGAAATGTGGCAAATGCTG-CAAAGCAAAGGCTTTACTTCCTTCGCTGCCTTCTCCCATTCCTCAAGTtatcactgactgcattggtgtttattcttcccaaacatctatttgtattttactacaaacgtatggagg-cttgtgcaatatttgatattgatc--------ta---tttttttaatgtgtataaggggaatcttacattatacatttttcatgactggcttcgtatgttaaacatgttcctcgtgagaataattcaggttgaggtgtgtagatactgttta----------------tttattACCACATCAATGAATGCATTACTATTCACACAGTCTCCTGTTTT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156370063 584 + 157873769 AA-CAC--TTTTAATCTTGTGGTATGT-TTTGGGGAATTTTTCCAATTTATTCTCTGAAATAA---TGTATTCAGAGCATACACCAAAAATAGGAGCCTGTTTCTTTATCCATTTAAGATT-CTCTCTCCCGTTTCTATCTATTGCTCATTTG----------------------CTGAACCTCTTGTCTCTTTGACTAACAGTATTTATTTTAAAGGTCTAATGAAATATTTTAAAGCAGTTATGAATAATGAGATAAT--------AGATGAGTACA-----AGCCACTAGCAGAAGACATGAAATGTGGCAAATGCTGCCAAAGCAAAGGCTTGACTTCCATCGCTGccttctcccattcctcaagttatcactgactgcattggtgtttattcttcccaaacatctattagtattttactacaaatgtatggagc-cttgggcaatatttgatattgatc--------ta--ttttttttaatgtgtataaggggaatcttacatt----atttttcgtgactggcttcgtatgttaaacatgttcctcatgagattaattcaggttgaggtgtgtagataccgttta----------------tttattaccacatcaatgaatgcattactattcccacagtctcctgtttc i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168187647 608 + 169853907 AA-CACTGTTTTAATTTTGTGGTATGT-TTTGGGGAATTTTTCCAATTTATACTTTGAAATAATGCTGTATTCAGAGCATACACCAAAAACAGGGGCCCGTTTCTTTATCCATTTACGATT-CTCTCCCTTGCTTCTATCTATTGCTCATTCA----------------------CTGAACCTCTTGTCCCTTTGACTAACTGTATTTATTTTAAAGGCCTAATGAAATATTTCAAAGCAGTTATGAATAATCAGATAATCAGATGACAGATGAGTACA-----AGCCACTAGCAGAGGACATGAAACGTGGTGAATGCCACCAAAGCAAAGGTTTCACttccatcgcttccttctcccattcctcaagttatcactgactgcattggtgtttattcttcccaaatatctcttcgtattttactacaaatgcatggagg-tttgctcaatatttggtattgatcagtctgagta--ttttttttaatgtgtataaggggaatcttacattttacatttttcatgactggctttgtatgttaaacatgttcctcgtgagattaattcaggttgagatgtgtag-tactgttta----------------tttattaccccatcaatgaatgcattactattcacacagtctcttgtttt i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169141652 608 - 170955103 AA-CACTGGTTTAATTTTGTGGTATGT-TTTGGGGAATTTTTCCAATTTATACTTTGAAATAATGTTGTATTCAGAGCATACACCAAAAACAGGGGCCCGTTTCTTTATCCATTTAAGATT-CTCTCCCTTGCTTCTATCTATTGCTCATTCA----------------------CTGAACCTCTTGTCCCTTTGACTAACTGTATTTATTTTAAAGGCCTAATGAAATATTTCAAAGCAGTTATGAATAATCAGATAATCAGATGACAGATGAGTACA-----AGCCACTAGCAGAGGACATGAAACGTGGTGAATGCCACCAAAGCAAAGGTTTCACttccatcgcttccttctcccattcctcaagttatcactgactgcattgatgtttattcttcccaaatatctcttcgtattttactacaaatgcatggagg-tttgctcaatatttggtattgatcagtctgagta--ttttttttaatgtgtataaggggaatcttacattttacatttttcatgactggctttgtatgttaaacatgttcctcgtgagattaattcaggttgagatgtgtag-tactgttta----------------tttattaccccatcaatgaatgcattactattcacacagtctcctgtttt i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163958306 609 + 165299245 AA-CACTGTTTTAATTTTGTGGTGTGT-TTTGGGGAATTTTTCCAATTTATACTCTGAAATAATGTTGTATTCAGAGCATACACCAAAAATAGGGgcccttttctttatccatttaagATT-CTCTCCCTTGCTTCTATCTATTGCTCATTCA----------------------CTGAACCTCTTGTCCCTTTGActaactgtatttattttaaaggcctaatgaaatatttcaaagcaGTTATGAATAATCAGATAATCAGATGACAGATGAGTACA-----AGCCACTAGCAGAGGACATGAAACGTGGTGAATGCCGCCAAAGCAAAGGTTTCACTTCCATCGCTTCCTTCTCCCATTCCTCAAGTTATCACTGACTGCATTGGTGTTTATtcttcccaaatatctcttcgtATTTTACTACAAATGCATGGAGGATTTGCTCAATATTTGGTATTGATcagtctgtgta--ttttttttaacgtGTATAAGGGGAatcttacattttacatttttcatgacTGACTTTGTATGTTAAACATGTTCCTCGTGAGATTAATTCAGGTTGAGATGTGTAG-TACTGTTTA----------------TTTATTACCCCACCAATGAATGCATTACTATTCACACAGTCTCCTGTTTT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96743663 607 + 98384682 AA-CACT--TTTAATTTTGTGGTATGT-TTTGGGGAATTTTTCCAATTTATACTCTGAAATAATGTTGTATTCAGAGCATACACCAAAAATAGGGGCCCGCTTCTTTATCCATTTAAGATT-CTCTCCCTTGTTTCTATCTATTGCTCATTCA----------------------CTGAACCTCTTGTCCCTTTGACTAATTGTATTTATTTTAAAGGCCTAATGAAATATTTCAAAGCAGTTATAAATAATCAGATAATCAGATGACAGATGAATACA-----AGCCACTAGCAGAGGACATGAAAAGTGGCGAATGCTGCCAAAGCAAAGGCTTCACttccatcgcttccttctcccattcctcaagttatcactgactgcattggtgtttattcttcccaaatatctattcgtgttttactacaaatgtgtggagg-tttgctcaatatttggtattgatcagtctgtgtat-ttttttttaacgtgtataagggaaatcttacatcttacatttttcatgactggctttgtatgttaaacatgttcctcgtgagattaattcaggttgagatgtgtag-tactgttta----------------tttattaccccaccaatgaatgaattactattcacacagtctcctgtttt i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169952934 621 + 171630274 AACCACTCTTTTAATTTTGTGGAATGT-TTTGGGGAA-TTTTCCAATTTATACTCCAAAATAATGTTGTATTCAGAGCATACACCAAAAATAGGAGCCCATTTCTTTATCCATTTAAGATT-CTCTCTCCTGTTTCTATGTGTTGGTCATTTGCTATTATTTTTTTCTCCAGTAACTGAACCTCTTGTCCCTTTGACTAATGGTATTTATTTTAAAGGTCTAATGAAATATTTCAAAGCAGTTATGAATAATGAGATGGT--------GGCTGAGTACA-----AGCCACCGGGAGAAGACGTGACGTGTGACGGATGCTGCCAGGGC-AGGGctccactcccaccgcttccttctcccgttcctgaagttatcaccgcctgaattggtgtgtattcttcccaaacatctactcgtgttttactacaaatgtgtggagg-ctttcagaatatttggaattgatc--------tatgtttttttaaatgtgtctaaggggagtttcaccttatacgttttccatgactggctttgtatgtgaaacacgttcctcatgagactaatccgggtcgaggcatgtagatgctgttta-----------tcttgtttatgagtacatcgatgaatgcattgctgttcacacagtctcctgttct i calJac3.chr4 C 0 C 0 s canFam3.chr1 56225851 600 + 122678785 AA-TAGTCTTTTAATCTTGTGATATTTCTTTTGAAAAATTTTCCAATACATATTTCGAAATAGTGTTATATTCAT-GCATACATTTAAAACAGTAGCCAGTT--GTTTTTCATTTAAGATCGTTATCACCTGTTTCTATGCATTACTCCTTTA----TTAATGTCTCACCCATAACAGAGCCTCTGGACCCTATGACTAACAGTATTTATCCCACAGGTATGATGGAATATAGTGAAGAATGTATAAATAACAAGGTAAT--------GGATGCTCACGTACTTAGTTACCAGACGAAGAAATAAAATATTACCCACACAT-CAGAGCTAGGcctcctttcccgctgc-----------------agaaatagcatcgcctgaattaaca---atccttcccagacat-tattcatattttactacacacgtatggagt-cttacacagtatttggtattgatg--------tacgtgctttaaaatttatataagcataatcttgcattacat-tttttaataacctgcttt-----ttaaaca-----cttctgagattaattcacattgaggtatatagatattgcttacttatttttatttttgtatattactgcatgaatgaatacctcattattcacatattcTCTGGTTTT i canFam3.chr1 I 812 I 371 a score=293151.000000 s hg38.chr6_KB021644v2_alt 165291 108 + 185823 cgtagacgtttacttgtttccaatatttcATCC------------------------CATTAGACCCTTGTGGAAGGACTTTTTCTACACTGGAAATCTAGGAGTGGAATAGCCGGGCCCCGGAGACACAGG s panTro4.chr6 170754910 108 + 172623881 catagatgtttacttgtttccagtgtttCATCC------------------------CATTAGACCCTTGTGGAAGGACTTTTTCTAGACTGGAAATCTAGGAGTCGAATATTTGGGCCTCGGAGACACAGG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172511490 108 + 174210431 CATATACTTTTACTTGTTTCCAATATTTCATCC------------------------CATTAAACCCTTGTGGAAGGACTTCTTCTAGACTGGAAATCTAGGAGTGGAATAGCCGGGCCCCGGAGCCACAGG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156370647 108 + 157873769 catagacttttacttgtttccaatatttcATCT------------------------CATTAGGCCCTTGTGGAAGGACTTTTTCTAGACTGAAAATCTAGGAGTGGAATATTTGGGCCCCAGAGCCACAGG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188255 132 + 169853907 catagacttttagttgtttccaatattttgtccttctgtctttatgaaaatctgtcccattaggcccttgtggaagcactttttctagactggaaatctaggagtggcatagctgggccacggagtCACAGG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142260 132 - 170955103 catagacttttagttgtttccaatattttgtccttctgtctttatgaaaatctgtcccattaggcccttgtggaagcactttttctagactggaaatctaggagtggcatagctgggccacggagtCACAGG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163958915 132 + 165299245 CATAGACTTTTagttgtttccaatattttgtcCTTCTGTCTTTATGAAAATCTGTACCAATAGGCCCTTGTGGAAGCACTTTTTCTAGACTGGAAATCTAGGAGTGGCATAGCTGGGCCACGGAGCCACAGG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96744270 126 + 98384682 catagacttttagttgtttccagtattttgtccttctgtctttatgaaaat------cattaggcccttgtggaagcactttttctaaactggaaatctagaagtggcatagctgggccacggagacacagg i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169953555 127 + 171630274 catagacttttagttgcttccagtatttcacct----gtctttatgaaaatctgtc-cattaggccctcgtggaagcaccttttctagactggaaatataggagtggaataggtgggccACGGAGCCACGGG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56226451 371 + 122678785 I a score=5319.000000 s hg38.chr6_KB021644v2_alt 165399 3 + 185823 AAC s panTro4.chr6 170755018 3 + 172623881 AAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172511598 3 + 174210431 AAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156370755 3 + 157873769 AAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188387 3 + 169853907 AAA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142392 3 - 170955103 AAA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163959047 3 + 165299245 AAC i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169953682 3 + 171630274 AAC i calJac3.chr4 C 0 I 1186 e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=-417.000000 s hg38.chr6_KB021644v2_alt 165402 1 + 185823 A s panTro4.chr6 170755021 1 + 172623881 A i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172511601 1 + 174210431 G i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156370758 1 + 157873769 A i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188390 1 + 169853907 G i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142395 1 - 170955103 G i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163959050 1 + 165299245 T i papAnu2.chr4 C 0 T 48 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=1500.000000 s hg38.chr6_KB021644v2_alt 165403 1 + 185823 C s panTro4.chr6 170755022 1 + 172623881 C i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172511602 1 + 174210431 C i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156370759 1 + 157873769 C i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188391 1 + 169853907 C i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142396 1 - 170955103 C i macFas5.chr4 C 0 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e papAnu2.chr4 163959051 48 + 165299245 T a score=76406.000000 s hg38.chr6_KB021644v2_alt 165404 46 + 185823 ACTAGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACAGGAA s panTro4.chr6 170755023 46 + 172623881 ACTGGAAATCTAGGAGTGGAATATTTGGGCCCCAGAGCCACGGGAA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172511603 46 + 174210431 ACTGGAAATCTAGGAGTGGAATATTTGGGCTGTGGAGCCACAGGAA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156370760 46 + 157873769 ACTGGAAATCTAGGAGTGGAATAGCTGGGCCATGGAGCCACAGGAA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188392 46 + 169853907 ACTGGAAATCTAGGAGTAGCATAGCTGGGCCACGGAGTCACAGGAA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142397 46 - 170955103 ACTGGAAATCTAGGAGTAGCATAGCTGGGCCACGGAGTCACAGGAA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163959003 46 + 165299245 ACTGGAAATCTAGGAGTGGCATAGCTGGGCCACGGAGCCACAGGAA i papAnu2.chr4 T 48 T 45 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=-51.000000 s hg38.chr6_KB021644v2_alt 165450 4 + 185823 TGCG s panTro4.chr6 170755069 4 + 172623881 CGCA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172511649 4 + 174210431 CACA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156370806 3 + 157873769 C-CA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188438 4 + 169853907 AGCA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142443 4 - 170955103 AGCA i macFas5.chr4 C 0 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e papAnu2.chr4 163959049 45 + 165299245 T a score=72727.000000 s hg38.chr6_KB021644v2_alt 165454 48 + 185823 CTGGAAATCTAGGAGTGGAATAGCCGGGCCCCGGAGCCACAGGAACAC s panTro4.chr6 170755073 48 + 172623881 CTGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGAACGC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172511653 48 + 174210431 CTGGAAATCTAGGAGTGGAATATTTGGGCTGTGGAGCCACACGAACTC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156370809 47 + 157873769 CTGGAAATCTAGGAGTGGAATAGCCGGGCCCTGGAGCCACAGGAAC-C i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188442 48 + 169853907 CTGGAAATCTAGGAGTAGCATAGCTGGGCCACAGAGCCACAGGAACAA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142447 48 - 170955103 CTGGAAATCTAGGAGTAGCATAGCTGGGCCACAGAGCCACAGGAACAA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163959004 48 + 165299245 CTGGAAATCTAGGAGTGGCATAGCTGGGCCACGGAGCCACAGGAACTC i papAnu2.chr4 T 45 T 49 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=45025.000000 s hg38.chr6_KB021644v2_alt 165502 26 + 185823 ACTGGAAATCTAGGAGTGGAATAGCT s panTro4.chr6 170755121 26 + 172623881 ACTGGAAATCTAGGAGTGGAATATTT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172511701 26 + 174210431 ACTGGAAATCTAGGAGTGGAATATTT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156370856 26 + 157873769 ACTGGAAATCTAGGAGTGGAATAGCT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188490 26 + 169853907 GCTGGAAATCTAGGAGTGGAATAACT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142495 26 - 170955103 GCTGGAAATCTAGGAGTGGAATAACT i macFas5.chr4 C 0 T 98 s papAnu2.chr4 163959003 26 + 165299245 ACTGGAAATCTAGGAGTGGCATAGCT i papAnu2.chr4 T 49 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=34177.000000 s hg38.chr6_KB021644v2_alt 165528 21 + 185823 GGGCCCCGGAGCCACGGGAAC s panTro4.chr6 170755147 21 + 172623881 GGGCCCCGGAGCCACGGGAAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172511727 21 + 174210431 GGGCCCCGGAGGCACAGGAAT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156370882 21 + 157873769 GGGCCCCGGAGCCACAGGACC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188516 21 + 169853907 GGGCCACGGAGCCACAGGAAC i rheMac3.chr4 C 0 T 98 s macFas5.chr4 169142423 21 - 170955103 GGGCCACGGAGTCACAGGAAA i macFas5.chr4 T 98 C 0 s papAnu2.chr4 163959029 21 + 165299245 GGGCCACGGAGCCACAGGAAC i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=2350.000000 s hg38.chr6_KB021644v2_alt 165549 2 + 185823 GC s panTro4.chr6 170755168 2 + 172623881 GC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172511748 2 + 174210431 GC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156370903 1 + 157873769 -C i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188439 2 + 169853907 GC i rheMac3.chr4 T 98 C 0 s macFas5.chr4 169142444 2 - 170955103 GC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163959050 2 + 165299245 TC i papAnu2.chr4 C 0 T 49 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=80053.000000 s hg38.chr6_KB021644v2_alt 165551 51 + 185823 ACTGGAAATCTAGGAGTGGAATAGCTGGGCCCCGGAGCCACGGGAACGCAC s panTro4.chr6 170755170 51 + 172623881 GCTGGAAATCTAGGAGGGGAATATTTGGGCCCCGGAGCCACGGGAACGCGC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172511750 51 + 174210431 ACTGGAAATATAGGAGTGGAATATTTGGGCCCCGGAGCCACAGGAACGCAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156370904 51 + 157873769 ACTGGAAATCTAGGAGTGGAATAGCCGGGCCGCGGAGCCACGGGAACACAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188441 51 + 169853907 ACTGGAAATCTAGGAGTAGCATAGCTGGGCCACAGAGCCACAGGAACAAGC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142446 51 - 170955103 ACTGGAAATCTAGGAGTAGCATAGCTGGGCCACAGAGCCACAGGAACAAGC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163959003 51 + 165299245 ACTGGAAATCTAGGAGTGGCATAGCTGGGCCACGGAGCCACAGGAACTCAC i papAnu2.chr4 T 49 T 49 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=77186.000000 s hg38.chr6_KB021644v2_alt 165602 45 + 185823 TGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGAAC s panTro4.chr6 170755221 45 + 172623881 TGGAAATCTAGGAGGGGAATATTTGGGCCCCGGAGCCACGGGAAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172511801 45 + 174210431 TGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACAGGAAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156370955 45 + 157873769 TGGAAGTCTAGGAGTGGAATAGCCGGGCCGCGGAGCCACAGGAAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188492 45 + 169853907 TGGAAATCTAGGAGTGGAATAACTGGGCCACGGAGCCACAGGAAC i rheMac3.chr4 C 0 T 47 s macFas5.chr4 169142497 45 - 170955103 TGGAAATCTAGGAGTGGAATAACTGGGCCATGGAGCCACAGGAAC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163959005 45 + 165299245 TGGAAATCTAGGAGTGGCATAGCTGGGCCACGGAGCCACAGGAAC i papAnu2.chr4 T 49 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=723.000000 s hg38.chr6_KB021644v2_alt 165647 2 + 185823 GC s panTro4.chr6 170755266 2 + 172623881 AC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172511846 2 + 174210431 GC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371000 2 + 157873769 GT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188490 2 + 169853907 GC i rheMac3.chr4 T 47 C 0 s macFas5.chr4 169142542 2 - 170955103 TC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163959050 2 + 165299245 TC i papAnu2.chr4 C 0 T 49 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=2255.000000 s hg38.chr6_KB021644v2_alt 165649 2 + 185823 AC s panTro4.chr6 170755268 2 + 172623881 GC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172511848 2 + 174210431 AC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371002 2 + 157873769 AC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169142544 2 - 170955103 AC i macFas5.chr4 C 0 T 49 s papAnu2.chr4 163959003 2 + 165299245 AC i papAnu2.chr4 T 49 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e rheMac3.chr4 168188492 0 + 169853907 C a score=72301.000000 s hg38.chr6_KB021644v2_alt 165651 43 + 185823 TGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGA s panTro4.chr6 170755270 43 + 172623881 TGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAACCACGGGA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172511850 43 + 174210431 TGGAAATCTAGGAGCGGAATATTTGGGCTGTGGAGCCACAGGA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371004 43 + 157873769 TGGAAATCTAGGAGTGGAATAGCCGGGCCATGGAGCCACAGGA i nomLeu3.chr3 C 0 I 2 s rheMac3.chr4 168188492 43 + 169853907 TGGAAATCTAGGAGTGGAATAACTGGGCCACGGAGCCACAGGA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142497 43 - 170955103 TGGAAATCTAGGAGTGGAATAACTGGGCCATGGAGCCACAGGA i macFas5.chr4 T 49 C 0 s papAnu2.chr4 163959005 43 + 165299245 TGGAAATCTAGGAGTGGCATAGCTGGGCCACGGAGCCACAGGA i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=2865.000000 s hg38.chr6_KB021644v2_alt 165694 2 + 185823 AC s panTro4.chr6 170755313 2 + 172623881 AC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172511893 2 + 174210431 AC i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168188535 2 + 169853907 AC i rheMac3.chr4 C 0 T 47 s macFas5.chr4 169142540 2 - 170955103 AC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163959048 2 + 165299245 AC i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e nomLeu3.chr3 156371047 2 + 157873769 I a score=-632.000000 s hg38.chr6_KB021644v2_alt 165696 1 + 185823 G s panTro4.chr6 170755315 1 + 172623881 A i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172511895 1 + 174210431 G i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168188490 1 + 169853907 G i rheMac3.chr4 T 47 C 0 s macFas5.chr4 169142542 1 - 170955103 T i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163959050 1 + 165299245 T i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e nomLeu3.chr3 156371047 2 + 157873769 I a score=2100.000000 s hg38.chr6_KB021644v2_alt 165697 1 + 185823 C s panTro4.chr6 170755316 1 + 172623881 C i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172511896 1 + 174210431 C i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371049 1 + 157873769 C i nomLeu3.chr3 I 2 C 0 s rheMac3.chr4 168188491 1 + 169853907 C i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142543 1 - 170955103 C i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163959051 1 + 165299245 C i papAnu2.chr4 C 0 T 49 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=2865.000000 s hg38.chr6_KB021644v2_alt 165698 2 + 185823 AC s panTro4.chr6 170755317 2 + 172623881 AC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172511897 2 + 174210431 AC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371050 2 + 157873769 AC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169142544 2 - 170955103 AC i macFas5.chr4 C 0 T 49 s papAnu2.chr4 163959003 2 + 165299245 AC i papAnu2.chr4 T 49 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e rheMac3.chr4 168188492 0 + 169853907 C a score=72504.000000 s hg38.chr6_KB021644v2_alt 165700 44 + 185823 TGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGAA s panTro4.chr6 170755319 44 + 172623881 TGGAAATCTAGGAGAGGAATATTTGGGCCCCGGAGCCACGGGAA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172511899 44 + 174210431 TGGAAATCTAGGAGTGGAATATTTGGGCCCTGGAGCCACAGGAA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371052 43 + 157873769 TGGAAATCTAGGAGTGGAATAGCCGGGCCACGGAGCCACAGGA- i nomLeu3.chr3 C 0 T 48 s rheMac3.chr4 168188492 44 + 169853907 TGGAAATCTAGGAGTGGAATAACTGGGCCACGGAGCCACAGGAA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142497 44 - 170955103 TGGAAATCTAGGAGTGGAATAACTGGGCCATGGAGCCACAGGAA i macFas5.chr4 T 49 C 0 s papAnu2.chr4 163959005 44 + 165299245 TGGAAATCTAGGAGTGGCATAGCTGGGCCACGGAGCCACAGGAA i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=7314.000000 s hg38.chr6_KB021644v2_alt 165744 5 + 185823 CCCAC s panTro4.chr6 170755363 5 + 172623881 CGCAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172511943 5 + 174210431 CGCAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371047 5 + 157873769 CCCAC i nomLeu3.chr3 T 48 C 0 s rheMac3.chr4 168188536 5 + 169853907 CTCAC i rheMac3.chr4 C 0 T 196 s macFas5.chr4 169142541 5 - 170955103 CTCAC i macFas5.chr4 C 0 T 196 s papAnu2.chr4 163959049 5 + 165299245 CTCAC i papAnu2.chr4 C 0 T 49 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=74993.000000 s hg38.chr6_KB021644v2_alt 165749 43 + 185823 TGGAAATCTAGGAGTGGAATAGCCAGGCCCTGGAGCCACGGGA s panTro4.chr6 170755368 43 + 172623881 TGGAAATCTAGGAGTGGAATAGCCAGGCCCCGGAGCCACAGGA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172511948 43 + 174210431 TGGAAATCTAGGAGTGGAATATCCGGGCCCCGGAGCCACAGGA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371052 43 + 157873769 TGGAAATCTAGGAGTGGAATAGCCGGGCCACGGAGCCACAGGA i nomLeu3.chr3 C 0 T 146 s rheMac3.chr4 168188345 43 + 169853907 tggaaatctaggagtggcatagctgggccacggagtCACAGGA i rheMac3.chr4 T 196 C 0 s macFas5.chr4 169142350 43 - 170955103 tggaaatctaggagtggcatagctgggccacggagtCACAGGA i macFas5.chr4 T 196 C 0 s papAnu2.chr4 163959005 43 + 165299245 TGGAAATCTAGGAGTGGCATAGCTGGGCCACGGAGCCACAGGA i papAnu2.chr4 T 49 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=3161.000000 s hg38.chr6_KB021644v2_alt 165792 4 + 185823 ATGC s panTro4.chr6 170755411 4 + 172623881 ACAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172511991 4 + 174210431 ACGC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156370949 4 + 157873769 ACAC i nomLeu3.chr3 T 146 C 0 s rheMac3.chr4 168188388 4 + 169853907 AAGC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142393 4 - 170955103 AAGC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163959048 4 + 165299245 ACTC i papAnu2.chr4 C 0 T 49 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=42355.000000 s hg38.chr6_KB021644v2_alt 165796 26 + 185823 ACTGGAAATCTAGGAGTGGAATATTT s panTro4.chr6 170755415 26 + 172623881 ACTGGAAATCTAGGAGTGGAATATTT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172511995 26 + 174210431 ACTGGAAATCTAGGAGTGGAATATTT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156370953 26 + 157873769 ACTGGAAGTCTAGGAGTGGAATAGCC i nomLeu3.chr3 C 0 I 116 s rheMac3.chr4 168188392 26 + 169853907 ACTGGAAATCTAGGAGTAGCATAGCT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142397 26 - 170955103 ACTGGAAATCTAGGAGTAGCATAGCT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163959003 26 + 165299245 ACTGGAAATCTAGGAGTGGCATAGCT i papAnu2.chr4 T 49 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=24023.000000 s hg38.chr6_KB021644v2_alt 165822 20 + 185823 GGGCCCCGGAGCCACGGGAA s panTro4.chr6 170755441 20 + 172623881 GGGCCCCAGAGACACAGGAA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512021 20 + 174210431 GGGCCGCGGAGCCACAGGAA i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168188418 20 + 169853907 GGGCCACGGAGTCACAGGAA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142423 20 - 170955103 GGGCCACGGAGTCACAGGAA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163959029 20 + 165299245 GGGCCACGGAGCCACAGGAA i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e nomLeu3.chr3 156370979 116 + 157873769 I a score=-49.000000 s hg38.chr6_KB021644v2_alt 165842 1 + 185823 C s panTro4.chr6 170755461 1 + 172623881 C i panTro4.chr6 C 0 T 98 s ponAbe2.chr6 172512041 1 + 174210431 C i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371095 1 + 157873769 C i nomLeu3.chr3 I 116 C 0 s rheMac3.chr4 168188438 1 + 169853907 A i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142443 1 - 170955103 A i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163959049 1 + 165299245 C i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=1282.000000 s hg38.chr6_KB021644v2_alt 165843 2 + 185823 CC s panTro4.chr6 170755364 2 + 172623881 GC i panTro4.chr6 T 98 C 0 s ponAbe2.chr6 172512042 2 + 174210431 GC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371096 2 + 157873769 CC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188439 2 + 169853907 GC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142444 2 - 170955103 GC i macFas5.chr4 C 0 T 98 s papAnu2.chr4 163959050 2 + 165299245 TC i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=4011.000000 s hg38.chr6_KB021644v2_alt 165845 2 + 185823 AC s panTro4.chr6 170755366 2 + 172623881 AC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512044 2 + 174210431 AC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371098 2 + 157873769 AC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188441 2 + 169853907 AC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142348 2 - 170955103 ac i macFas5.chr4 T 98 C 0 s papAnu2.chr4 163959052 2 + 165299245 AC i papAnu2.chr4 C 0 T 49 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=74790.000000 s hg38.chr6_KB021644v2_alt 165847 47 + 185823 TGGAAATCTAGGAGTGGAATAGCCAGGCCCTGGAGCCACGGGAACAC s panTro4.chr6 170755368 47 + 172623881 TGGAAATCTAGGAGTGGAATAGCCAGGCCCCGGAGCCACAGGAACAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512046 47 + 174210431 TGGAAATCTAGGAGTGGAATATTTGGGCCGTGGAGCCACAGGAATGC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371100 47 + 157873769 TGGAAATCTAGGAGTGGAATAGCCGGGCCGCGGAGCCACAGGAACAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188443 47 + 169853907 TGGAAATCTAGGAGTAGCATAGCTGGGCCACAGAGCCACAGGAACAA i rheMac3.chr4 C 0 T 147 s macFas5.chr4 169142350 47 - 170955103 tggaaatctaggagtggcatagctgggccacggagtCACAGGAAAGC i macFas5.chr4 C 0 T 49 s papAnu2.chr4 163959005 47 + 165299245 TGGAAATCTAGGAGTGGCATAGCTGGGCCACGGAGCCACAGGAACTC i papAnu2.chr4 T 49 T 49 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=55130.000000 s hg38.chr6_KB021644v2_alt 165894 47 + 185823 ACTGGAAATCTAGGAGTGGAATAGCCGGGCCCCGGAGCCACGGGAAC s panTro4.chr6 170755415 47 + 172623881 ACTGGAAATCTAGGAGTGGAATATTTGGGCCCCAGAGACACAGGAAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512093 47 + 174210431 ACTGGAAATCTAGGAGTGGAATATTTGGGCCATGGAGCCACAGGAAT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371147 47 + 157873769 ACTGGAAATCTAGGAGTGGAATAGCCGGGCCATGGAGCCACAGGAAC i nomLeu3.chr3 C 0 I 48 s macFas5.chr4 169142348 47 - 170955103 actggaaatctaggagtggcatagctgggccacggagtCACAGGAAA i macFas5.chr4 T 49 C 0 s papAnu2.chr4 163959003 47 + 165299245 ACTGGAAATCTAGGAGTGGCATAGCTGGGCCACGGAGCCACAGGAAC i papAnu2.chr4 T 49 T 47 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e rheMac3.chr4 168188490 147 + 169853907 T a score=1530.000000 s hg38.chr6_KB021644v2_alt 165941 3 + 185823 GCT s panTro4.chr6 170755462 3 + 172623881 GCA i panTro4.chr6 C 0 T 490 s ponAbe2.chr6 172512140 3 + 174210431 GCA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371242 3 + 157873769 GTA i nomLeu3.chr3 I 48 C 0 s macFas5.chr4 169142395 3 - 170955103 GCA i macFas5.chr4 C 0 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e papAnu2.chr4 163959050 47 + 165299245 T e rheMac3.chr4 168188490 147 + 169853907 T a score=23426.000000 s hg38.chr6_KB021644v2_alt 165944 31 + 185823 CTGGAAATCTAGGAGTGGAATATTTGGGCCC s panTro4.chr6 170754975 31 + 172623881 CTGGAAATCTAGGAGTCGAATATTTGGGCCT i panTro4.chr6 T 490 C 0 s ponAbe2.chr6 172512143 31 + 174210431 CTGGAAATCTAGGAGTGGAATATTTGGGCCT i ponAbe2.chr6 C 0 I 540 s nomLeu3.chr3 156371245 31 + 157873769 CTGGAAATCTAGGAGTGGAATAGCCGGGCCA i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169142398 31 - 170955103 CTGGAAATCTAGGAGTAGCATAGCTGGGCCA i macFas5.chr4 C 0 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e papAnu2.chr4 163959050 47 + 165299245 T e rheMac3.chr4 168188490 147 + 169853907 T a score=10414.000000 s hg38.chr6_KB021644v2_alt 165975 17 + 185823 CGGAGCCACGGGAACGC s panTro4.chr6 170755006 17 + 172623881 CGGAGACACAGGAACAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512714 17 + 174210431 CGGAGCCACAGGAACGC i ponAbe2.chr6 I 540 C 0 s nomLeu3.chr3 156371276 16 + 157873769 TGGAGCCAC-GGAACGT i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169142429 17 - 170955103 CGGAGTCACAGGAAAGC i macFas5.chr4 C 0 T 98 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e papAnu2.chr4 163959050 47 + 165299245 T e rheMac3.chr4 168188490 147 + 169853907 T a score=73820.000000 s hg38.chr6_KB021644v2_alt 165992 48 + 185823 ACTGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGAACG s panTro4.chr6 170755023 48 + 172623881 ACTGGAAATCTAGGAGTGGAATATTTGGGCCCCAGAGCCACGGGAACG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512731 48 + 174210431 ACTGGAAATCTAGGAGCGGAATATTTGTGCCCCGGAGCCACAGGAACG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371292 47 + 157873769 ACTGGAAATCTAGAAGTGGAATAGCCGGGCCATGGAGCCAC-GGAACG i nomLeu3.chr3 C 0 T 145 s rheMac3.chr4 168188343 48 + 169853907 actggaaatctaggagtggcatagctgggccacggagtCACAGGAAAG i rheMac3.chr4 T 147 C 0 s macFas5.chr4 169142348 48 - 170955103 actggaaatctaggagtggcatagctgggccacggagtCACAGGAAAG i macFas5.chr4 T 98 C 0 s papAnu2.chr4 163959003 48 + 165299245 ACTGGAAATCTAGGAGTGGCATAGCTGGGCCACGGAGCCACAGGAACT i papAnu2.chr4 T 47 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=2100.000000 s hg38.chr6_KB021644v2_alt 166040 1 + 185823 C s panTro4.chr6 170755071 1 + 172623881 C i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512779 1 + 174210431 C i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371194 1 + 157873769 C i nomLeu3.chr3 T 145 C 0 s rheMac3.chr4 168188391 1 + 169853907 C i rheMac3.chr4 C 0 T 49 s macFas5.chr4 169142396 1 - 170955103 C i macFas5.chr4 C 0 T 49 s papAnu2.chr4 163959051 1 + 165299245 C i papAnu2.chr4 C 0 T 49 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=54009.000000 s hg38.chr6_KB021644v2_alt 166041 32 + 185823 ACTGGAAATCTAGGAGTGGAATATTTGGGCCC s panTro4.chr6 170755072 32 + 172623881 ACTGGAAATCTAGGAGTGGAATATTTGGGCCC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512780 32 + 174210431 ACTGGAAATCTAGGAGCGGAATATTTGGGCCG i ponAbe2.chr6 C 0 T 637 s nomLeu3.chr3 156371195 32 + 157873769 ACTGGAAATCTAGGAGTGGAATAGCTGGGCCG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188343 32 + 169853907 actggaaatctaggagtggcatagctgggcca i rheMac3.chr4 T 49 C 0 s macFas5.chr4 169142348 32 - 170955103 actggaaatctaggagtggcatagctgggcca i macFas5.chr4 T 49 C 0 s papAnu2.chr4 163959003 32 + 165299245 ACTGGAAATCTAGGAGTGGCATAGCTGGGCCA i papAnu2.chr4 T 49 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=27220.000000 s hg38.chr6_KB021644v2_alt 166073 17 + 185823 CGGAGCCACGGGAACGC s panTro4.chr6 170755104 17 + 172623881 CGGAGCCACGGGAACGC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512175 17 + 174210431 TGGAGCCACAGGAACGC i ponAbe2.chr6 T 637 C 0 s nomLeu3.chr3 156371227 17 + 157873769 CGGAGCCACAGGAACGT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188375 17 + 169853907 cggagtCACAGGAAAGC i rheMac3.chr4 C 0 T 49 s macFas5.chr4 169142380 17 - 170955103 cggagtCACAGGAAAGC i macFas5.chr4 C 0 T 49 s papAnu2.chr4 163959035 17 + 165299245 CGGAGCCACAGGAACTC i papAnu2.chr4 C 0 T 49 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=77328.000000 s hg38.chr6_KB021644v2_alt 166090 49 + 185823 ACTGGAAATCTAGGAGTGGAATAGCCGGGCCCCGGAGCCACGGGAACGC s panTro4.chr6 170755121 49 + 172623881 ACTGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGAACGC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512192 49 + 174210431 ACTGGAAATCTAGGAGAGGAATATCCGGGCCCCGGAGCCACAGGAACAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371244 48 + 157873769 ACTGGAAATCTAGGAGTGGAATAGCCGGGCCATGGAGCCAC-GGAACGT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188343 49 + 169853907 actggaaatctaggagtggcatagctgggccacggagtCACAGGAAAGC i rheMac3.chr4 T 49 T 49 s macFas5.chr4 169142348 49 - 170955103 actggaaatctaggagtggcatagctgggccacggagtCACAGGAAAGC i macFas5.chr4 T 49 T 49 s papAnu2.chr4 163959003 49 + 165299245 ACTGGAAATCTAGGAGTGGCATAGCTGGGCCACGGAGCCACAGGAACTC i papAnu2.chr4 T 49 T 49 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=78134.000000 s hg38.chr6_KB021644v2_alt 166139 50 + 185823 ACTGGAAATCTAGGAGTGGAATAGCTGGGCCCCGGAGCCACGGGAACGCA s panTro4.chr6 170755170 50 + 172623881 GCTGGAAATCTAGGAGGGGAATATTTGGGCCCCGGAGCCACGGGAACGCG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512241 50 + 174210431 ACTGGAAATCTAGGAGTGGAATAGCCGGGCCCCAGAGCCACAGGAACACA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371292 49 + 157873769 ACTGGAAATCTAGAAGTGGAATAGCCGGGCCATGGAGCCAC-GGAACGCA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188343 50 + 169853907 actggaaatctaggagtggcatagctgggccacggagtCACAGGAAAGCA i rheMac3.chr4 T 49 C 0 s macFas5.chr4 169142348 50 - 170955103 actggaaatctaggagtggcatagctgggccacggagtCACAGGAAAGCA i macFas5.chr4 T 49 C 0 s papAnu2.chr4 163959003 50 + 165299245 ACTGGAAATCTAGGAGTGGCATAGCTGGGCCACGGAGCCACAGGAACTCA i papAnu2.chr4 T 49 T 48 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=430.000000 s hg38.chr6_KB021644v2_alt 166189 1 + 185823 A s panTro4.chr6 170755220 1 + 172623881 C i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512291 1 + 174210431 C i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371341 1 + 157873769 C i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188393 1 + 169853907 C i rheMac3.chr4 C 0 T 49 s macFas5.chr4 169142398 1 - 170955103 C i macFas5.chr4 C 0 T 49 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e papAnu2.chr4 163959053 48 + 165299245 T a score=50788.000000 s hg38.chr6_KB021644v2_alt 166190 30 + 185823 TGGAAATCTAGGAGTGGAATAGCTGGGCCC s panTro4.chr6 170755221 30 + 172623881 TGGAAATCTAGGAGGGGAATATTTGGGCCC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512292 30 + 174210431 TGGAAATCTAGGAGTGGAATAGCCGGGCCC i ponAbe2.chr6 C 0 T 147 s nomLeu3.chr3 156371342 30 + 157873769 TGGAAATCTAGGAGTGGAATAGCCGGGCCA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188345 30 + 169853907 tggaaatctaggagtggcatagctgggcca i rheMac3.chr4 T 49 C 0 s macFas5.chr4 169142350 30 - 170955103 tggaaatctaggagtggcatagctgggcca i macFas5.chr4 T 49 C 0 s papAnu2.chr4 163959005 30 + 165299245 TGGAAATCTAGGAGTGGCATAGCTGGGCCA i papAnu2.chr4 T 48 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=23516.000000 s hg38.chr6_KB021644v2_alt 166220 17 + 185823 CGGAGCCACGGGAACGC s panTro4.chr6 170755251 17 + 172623881 CGGAGCCACGGGAACAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512175 17 + 174210431 TGGAGCCACAGGAACGC i ponAbe2.chr6 T 147 C 0 s nomLeu3.chr3 156371372 16 + 157873769 TGGAGCCAC-GGAACAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188375 17 + 169853907 cggagtCACAGGAAAGC i rheMac3.chr4 C 0 T 49 s macFas5.chr4 169142380 17 - 170955103 cggagtCACAGGAAAGC i macFas5.chr4 C 0 T 49 s papAnu2.chr4 163959035 17 + 165299245 CGGAGCCACAGGAACTC i papAnu2.chr4 C 0 T 49 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=75581.000000 s hg38.chr6_KB021644v2_alt 166237 49 + 185823 ACTGGAAATCTAGGAGTGGAATAGCTGGGCCCCGGAGCCACGGGAACGC s panTro4.chr6 170755268 49 + 172623881 GCTGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAACCACGGGAACAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512192 49 + 174210431 ACTGGAAATCTAGGAGAGGAATATCCGGGCCCCGGAGCCACAGGAACAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371388 48 + 157873769 ACTGGAAATCTAGGAGTGGAATAGCCGGGCCACGGAGCCACCAGAAC-C i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188343 49 + 169853907 actggaaatctaggagtggcatagctgggccacggagtCACAGGAAAGC i rheMac3.chr4 T 49 C 0 s macFas5.chr4 169142348 49 - 170955103 actggaaatctaggagtggcatagctgggccacggagtCACAGGAAAGC i macFas5.chr4 T 49 C 0 s papAnu2.chr4 163959003 49 + 165299245 ACTGGAAATCTAGGAGTGGCATAGCTGGGCCACGGAGCCACAGGAACTC i papAnu2.chr4 T 49 T 49 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=79196.000000 s hg38.chr6_KB021644v2_alt 166286 49 + 185823 ACTGGAAATCTAGGAGTGGAATAGCTGGGCCCCGGAGCCACGGGAACGC s panTro4.chr6 170755317 49 + 172623881 ACTGGAAATCTAGGAGAGGAATATTTGGGCCCCGGAGCCACGGGAACGC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512241 49 + 174210431 ACTGGAAATCTAGGAGTGGAATAGCCGGGCCCCAGAGCCACAGGAACAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371436 49 + 157873769 ACTGGAAATCTAGGAGTGGAATAGCCGGGCCATGGAGCCACAGGAACGT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188392 49 + 169853907 ACTGGAAATCTAGGAGTAGCATAGCTGGGCCACGGAGTCACAGGAAAGC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142397 49 - 170955103 ACTGGAAATCTAGGAGTAGCATAGCTGGGCCACGGAGTCACAGGAAAGC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163959003 49 + 165299245 ACTGGAAATCTAGGAGTGGCATAGCTGGGCCACGGAGCCACAGGAACTC i papAnu2.chr4 T 49 T 49 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=86701.000000 s hg38.chr6_KB021644v2_alt 166335 51 + 185823 ACTGGAAATCTAGGAGTGGAATAGCTGGGCCCCGGAGCCACGGGAACGCAC s panTro4.chr6 170755366 51 + 172623881 ACTGGAAATCTAGGAGTGGAATAGCCAGGCCCCGGAGCCACAGGAACACAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512290 51 + 174210431 ACTGGAAATCTAGGAGTGGAATAGCCGGGCCCCGGAGCCACAGGAACGCAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371485 51 + 157873769 ACTGGAAATCTAGGAGTGGAATAGCCGGGCCACGGAGCCACAGGAACACAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188441 51 + 169853907 ACTGGAAATCTAGGAGTAGCATAGCTGGGCCACAGAGCCACAGGAACAAGC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142446 51 - 170955103 ACTGGAAATCTAGGAGTAGCATAGCTGGGCCACAGAGCCACAGGAACAAGC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163959003 51 + 165299245 ACTGGAAATCTAGGAGTGGCATAGCTGGGCCACGGAGCCACAGGAACTCAC i papAnu2.chr4 T 49 T 49 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=76564.000000 s hg38.chr6_KB021644v2_alt 166386 44 + 185823 TGGAAATCTAGGAGTGGAATAGCTGGGCCCCGGAGCCACGGGAA s panTro4.chr6 170755417 44 + 172623881 TGGAAATCTAGGAGTGGAATATTTGGGCCCCAGAGACACAGGAA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512341 44 + 174210431 TGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACAGGAA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371536 44 + 157873769 TGGAAATCTAGGAGTGGAATAGCTGGGCCCCAGAGCCACAGGAA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188492 44 + 169853907 TGGAAATCTAGGAGTGGAATAACTGGGCCACGGAGCCACAGGAA i rheMac3.chr4 C 0 T 49 s macFas5.chr4 169142497 44 - 170955103 TGGAAATCTAGGAGTGGAATAACTGGGCCATGGAGCCACAGGAA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163959005 44 + 165299245 TGGAAATCTAGGAGTGGCATAGCTGGGCCACGGAGCCACAGGAA i papAnu2.chr4 T 49 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=4680.000000 s hg38.chr6_KB021644v2_alt 166430 5 + 185823 TGCAC s panTro4.chr6 170755461 5 + 172623881 CGCAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512385 5 + 174210431 CACAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371580 5 + 157873769 CGCAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188487 3 + 169853907 --CAA i rheMac3.chr4 T 49 I 2 s macFas5.chr4 169142541 5 - 170955103 CTCAC i macFas5.chr4 C 0 T 49 s papAnu2.chr4 163959049 5 + 165299245 CTCAC i papAnu2.chr4 C 0 T 49 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=76916.000000 s hg38.chr6_KB021644v2_alt 166435 45 + 185823 TGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCATGGGAAC s panTro4.chr6 170755466 45 + 172623881 TGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGAAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512390 45 + 174210431 TGGAAATCTAGGAGTGGAATAGCTGGGCCCCGGAGCCACAGGAAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371585 45 + 157873769 TGGAAATCTAGGAGTGGAATAGCCGGGCCATGGAGCCACCAGAAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188492 45 + 169853907 TGGAAATCTAGGAGTGGAATAACTGGGCCACGGAGCCACAGGAAC i rheMac3.chr4 I 2 T 47 s macFas5.chr4 169142497 45 - 170955103 TGGAAATCTAGGAGTGGAATAACTGGGCCATGGAGCCACAGGAAC i macFas5.chr4 T 49 C 0 s papAnu2.chr4 163959005 45 + 165299245 TGGAAATCTAGGAGTGGCATAGCTGGGCCACGGAGCCACAGGAAC i papAnu2.chr4 T 49 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=-1395.000000 s hg38.chr6_KB021644v2_alt 166480 2 + 185823 AC- s panTro4.chr6 170755511 2 + 172623881 GC- i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512435 2 + 174210431 AC- i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371630 1 + 157873769 -C- i nomLeu3.chr3 C 0 C 0 s papAnu2.chr4 163959050 2 + 165299245 -TC i papAnu2.chr4 C 0 T 49 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e rheMac3.chr4 168188537 47 + 169853907 T e macFas5.chr4 169142542 0 - 170955103 C a score=2126.000000 s hg38.chr6_KB021644v2_alt 166482 2 + 185823 AC s panTro4.chr6 170755513 2 + 172623881 AC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512437 2 + 174210431 AC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371631 2 + 157873769 AC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188490 2 + 169853907 GC i rheMac3.chr4 T 47 C 0 s macFas5.chr4 169142542 2 - 170955103 TC i macFas5.chr4 C 0 T 47 s papAnu2.chr4 163959003 2 + 165299245 AC i papAnu2.chr4 T 49 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=75407.000000 s hg38.chr6_KB021644v2_alt 166484 44 + 185823 TGGAAATCTAGGAGTGGAATAGCCGGGCCCTGGAGCCACGGGAA s panTro4.chr6 170755515 44 + 172623881 TGGAAATCTAGGAGGGGAATATTTGGGCCCCGGAGCCACGGGAA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512439 44 + 174210431 TGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACAGGAA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371633 44 + 157873769 TGGAAATCTAGGAGTGGAATAGCCGGGCCATGGAGCCACAGGAA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188492 44 + 169853907 TGGAAATCTAGGAGTGGAATAACTGGGCCACGGAGCCACAGGAA i rheMac3.chr4 C 0 T 98 s macFas5.chr4 169142497 44 - 170955103 TGGAAATCTAGGAGTGGAATAACTGGGCCATGGAGCCACAGGAA i macFas5.chr4 T 47 C 0 s papAnu2.chr4 163959005 44 + 165299245 TGGAAATCTAGGAGTGGCATAGCTGGGCCACGGAGCCACAGGAA i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=152.000000 s hg38.chr6_KB021644v2_alt 166528 1 + 185823 T s panTro4.chr6 170755559 1 + 172623881 C i panTro4.chr6 C 0 T 98 s ponAbe2.chr6 172512483 1 + 174210431 C i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371677 1 + 157873769 C i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188438 1 + 169853907 A i rheMac3.chr4 T 98 C 0 s macFas5.chr4 169142541 1 - 170955103 C i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163959049 1 + 165299245 C i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=1288.000000 s hg38.chr6_KB021644v2_alt 166529 2 + 185823 GC s panTro4.chr6 170755462 2 + 172623881 GC i panTro4.chr6 T 98 C 0 s ponAbe2.chr6 172512484 2 + 174210431 AC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371678 1 + 157873769 -C i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188439 2 + 169853907 GC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142542 2 - 170955103 TC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163959050 2 + 165299245 TC i papAnu2.chr4 C 0 T 49 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=4011.000000 s hg38.chr6_KB021644v2_alt 166531 2 + 185823 AC s panTro4.chr6 170755464 2 + 172623881 AC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512486 2 + 174210431 AC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371679 2 + 157873769 AC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188441 2 + 169853907 AC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142544 2 - 170955103 AC i macFas5.chr4 C 0 T 98 s papAnu2.chr4 163959003 2 + 165299245 AC i papAnu2.chr4 T 49 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=70719.000000 s hg38.chr6_KB021644v2_alt 166533 47 + 185823 TGGAAATCTAGGAGTGGAATAGCCGGGCCCCGGAGCCACAGGAACGC s panTro4.chr6 170755466 47 + 172623881 TGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGAACGC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512488 47 + 174210431 TGGAAATCTAGGAGCGGAATATTTGGGCCGTGGAGCCACAGGAACGC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371681 46 + 157873769 TGGAAATCTAGGAGTGGAATAGCCGGGCCATGGAGCCACCAGAAC-C i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188443 47 + 169853907 TGGAAATCTAGGAGTAGCATAGCTGGGCCACAGAGCCACAGGAACAA i rheMac3.chr4 C 0 T 147 s macFas5.chr4 169142448 47 - 170955103 TGGAAATCTAGGAGTAGCATAGCTGGGCCACAGAGCCACAGGAACAA i macFas5.chr4 T 98 C 0 s papAnu2.chr4 163959005 47 + 165299245 TGGAAATCTAGGAGTGGCATAGCTGGGCCACGGAGCCACAGGAACTC i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=3279.000000 s hg38.chr6_KB021644v2_alt 166580 2 + 185823 AC s panTro4.chr6 170755513 2 + 172623881 AC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512535 2 + 174210431 AC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371727 2 + 157873769 AC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188343 2 + 169853907 ac i rheMac3.chr4 T 147 C 0 s macFas5.chr4 169142495 2 - 170955103 GC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163959052 2 + 165299245 AC i papAnu2.chr4 C 0 T 49 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=75316.000000 s hg38.chr6_KB021644v2_alt 166582 49 + 185823 TGGAAATCTAGGAGTGGAATATTTGGGCCCTGGAGCCACAGGAACGCAC s panTro4.chr6 170755515 49 + 172623881 TGGAAATCTAGGAGGGGAATATTTGGGCCCCGGAGCCACGGGAACGCAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512537 49 + 174210431 TGGAAATCTAGGAGCGGAATATTTGGGCCCCGGAGCCACAGGAACGCAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371729 48 + 157873769 TAGAAATCTAGGAGTGGAATAGCCGGGGCACAGAGCCACAGGAAC-CAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188345 49 + 169853907 tggaaatctaggagtggcatagctgggccacggagtCACAGGAAAGCAC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142497 49 - 170955103 TGGAAATCTAGGAGTGGAATAACTGGGCCATGGAGCCACAGGAACTCAC i macFas5.chr4 C 0 T 98 s papAnu2.chr4 163959005 49 + 165299245 TGGAAATCTAGGAGTGGCATAGCTGGGCCACGGAGCCACAGGAACTCAC i papAnu2.chr4 T 49 T 49 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=71387.000000 s hg38.chr6_KB021644v2_alt 166631 47 + 185823 TGGAAATCTAGGAGTGGAATATTTGGGTCCCGGAGACACAGGAACAC s panTro4.chr6 170755564 46 + 172623881 TGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACA-GAACAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512586 47 + 174210431 TGGAAATCTAGGAGCGGAATATTTGGGCCCCGGAGCCACAGGAACGC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371777 47 + 157873769 TGGAAATCTAGGAGTGGAATAGCCGGGCCACGGAGCCACAGGAACAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188394 47 + 169853907 TGGAAATCTAGGAGTAGCATAGCTGGGCCACGGAGTCACAGGAAAGC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142448 47 - 170955103 TGGAAATCTAGGAGTAGCATAGCTGGGCCACAGAGCCACAGGAACAA i macFas5.chr4 T 98 T 147 s papAnu2.chr4 163959005 47 + 165299245 TGGAAATCTAGGAGTGGCATAGCTGGGCCACGGAGCCACAGGAACTC i papAnu2.chr4 T 49 T 49 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=75521.000000 s hg38.chr6_KB021644v2_alt 166678 49 + 185823 ACTGGAAATCTAGGAGTGGAATAGCTGGGCCCCGGAGCCACGGGAACGC s panTro4.chr6 170755610 49 + 172623881 ACTGGAATTCTAGGAGTGGAATATTTGGGCCCCAGAGCCACAGGAACGC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512633 49 + 174210431 ACTGGAAATCTAGGAGCGGAATATTTGGGCCCCGGAGCCACAGGAACGC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371824 48 + 157873769 ACTGGAAATCTAGGAGTGGAATAGCCAGGCCGCGGAGCCAC-GGAACGC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188441 49 + 169853907 ACTGGAAATCTAGGAGTAGCATAGCTGGGCCACAGAGCCACAGGAACAA i rheMac3.chr4 C 0 T 147 s macFas5.chr4 169142348 49 - 170955103 actggaaatctaggagtggcatagctgggccacggagtCACAGGAAAGC i macFas5.chr4 T 147 C 0 s papAnu2.chr4 163959003 49 + 165299245 ACTGGAAATCTAGGAGTGGCATAGCTGGGCCACGGAGCCACAGGAACTC i papAnu2.chr4 T 49 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=4011.000000 s hg38.chr6_KB021644v2_alt 166727 2 + 185823 AC s panTro4.chr6 170755659 2 + 172623881 AC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512682 2 + 174210431 AC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371872 2 + 157873769 AC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188343 2 + 169853907 ac i rheMac3.chr4 T 147 C 0 s macFas5.chr4 169142397 2 - 170955103 AC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163959052 2 + 165299245 AC i papAnu2.chr4 C 0 T 49 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=69689.000000 s hg38.chr6_KB021644v2_alt 166729 47 + 185823 TGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGAACGC s panTro4.chr6 170755661 47 + 172623881 TGGAATTCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGAACGC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512684 47 + 174210431 TGGAAATCTAGGAGCGGAATATTTGGGCCCCGGAGCCACAGGAACGC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371874 46 + 157873769 TAGAAATCTAGGAGTGGAATAGCCGGGGCACAGAGCCACAGGAAC-T i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188345 47 + 169853907 tggaaatctaggagtggcatagctgggccacggagtCACAGGAAAGC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142399 47 - 170955103 TGGAAATCTAGGAGTAGCATAGCTGGGCCACGGAGTCACAGGAAAGC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163959005 47 + 165299245 TGGAAATCTAGGAGTGGCATAGCTGGGCCACGGAGCCACAGGAACTC i papAnu2.chr4 T 49 T 49 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=25788.000000 s hg38.chr6_KB021644v2_alt 166776 13 + 185823 ACTGGAAATCTAG s panTro4.chr6 170755708 13 + 172623881 ACTGGAAATCTAG i panTro4.chr6 C 0 T 167 s ponAbe2.chr6 172512731 13 + 174210431 ACTGGAAATCTAG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371920 13 + 157873769 ACTGGAAATCTAG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188392 13 + 169853907 ACTGGAAATCTAG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142446 13 - 170955103 ACTGGAAATCTAG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163959003 13 + 165299245 ACTGGAAATCTAG i papAnu2.chr4 T 49 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=29807.000000 s hg38.chr6_KB021644v2_alt 166789 28 + 185823 GAGTGGAATAGCCAGGCCCCGGAGCCAC s ponAbe2.chr6 172512744 28 + 174210431 GAGCGGAATATTTGTGCCCCGGAGCCAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371933 28 + 157873769 GAGTGGAATAGCCGGGCCACGGAGCCAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188405 28 + 169853907 GAGTAGCATAGCTGGGCCACGGAGTCAC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142459 28 - 170955103 GAGTAGCATAGCTGGGCCACAGAGCCAC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163959016 28 + 165299245 GAGTGGCATAGCTGGGCCACGGAGCCAC i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e panTro4.chr6 170755721 167 + 172623881 T a score=10095.000000 s hg38.chr6_KB021644v2_alt 166817 8 + 185823 GGGAACGC s panTro4.chr6 170755554 8 + 172623881 GGGAACGC i panTro4.chr6 T 167 C 0 s ponAbe2.chr6 172512772 8 + 174210431 AGGAACGC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371961 8 + 157873769 AGGAACAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188433 8 + 169853907 AGGAAAGC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142487 8 - 170955103 AGGAACAA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163959044 8 + 165299245 AGGAACTC i papAnu2.chr4 C 0 T 49 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=67444.000000 s hg38.chr6_KB021644v2_alt 166825 41 + 185823 ACTTGAAATCTAGGAGTGGAATAGCTGGGCCCCGGAGCCAC s panTro4.chr6 170755562 41 + 172623881 ACTGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCAC i panTro4.chr6 C 0 I 132 s ponAbe2.chr6 172512780 41 + 174210431 ACTGGAAATCTAGGAGCGGAATATTTGGGCCGTGGAGCCAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156371969 41 + 157873769 ACTGGAAATCTAGGAGTGGAATAGCCGGGCCCCGGAGCCAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188441 41 + 169853907 ACTGGAAATCTAGGAGTAGCATAGCTGGGCCACAGAGCCAC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142495 41 - 170955103 GCTGGAAATCTAGGAGTGGAATAACTGGGCCATGGAGCCAC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163959003 41 + 165299245 ACTGGAAATCTAGGAGTGGCATAGCTGGGCCACGGAGCCAC i papAnu2.chr4 T 49 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=7400.000000 s hg38.chr6_KB021644v2_alt 166866 8 + 185823 GGGAACCC s ponAbe2.chr6 172512821 8 + 174210431 AGGAACGC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156372010 8 + 157873769 AGGAACAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188482 8 + 169853907 AGGAACAA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142536 8 - 170955103 AGGAACTC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163959044 8 + 165299245 AGGAACTC i papAnu2.chr4 C 0 T 49 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e panTro4.chr6 170755603 132 + 172623881 I a score=2255.000000 s hg38.chr6_KB021644v2_alt 166874 2 + 185823 AC s ponAbe2.chr6 172512829 2 + 174210431 AC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156372018 2 + 157873769 AC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188490 2 + 169853907 GC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142544 2 - 170955103 AC i macFas5.chr4 C 0 T 49 s papAnu2.chr4 163959003 2 + 165299245 AC i papAnu2.chr4 T 49 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e panTro4.chr6 170755603 132 + 172623881 I a score=15555.000000 s hg38.chr6_KB021644v2_alt 166876 11 + 185823 TGGAAATCTAG s ponAbe2.chr6 172512831 11 + 174210431 TGGAAATCTAG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156372020 11 + 157873769 TGGAAATCTAG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188492 11 + 169853907 TGGAAATCTAG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169142497 11 - 170955103 TGGAAATCTAG i macFas5.chr4 T 49 C 0 s papAnu2.chr4 163959005 11 + 165299245 TGGAAATCTAG i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e panTro4.chr6 170755603 132 + 172623881 I a score=56014.000000 s hg38.chr6_KB021644v2_alt 166887 33 + 185823 GAGTGGAATAGCTGGGCCCCGGAGCCACGGGAA s panTro4.chr6 170755735 33 + 172623881 GAGTGGAATAGCCGGGCCCTGGAGCCACAGGAA i panTro4.chr6 I 132 C 0 s ponAbe2.chr6 172512842 33 + 174210431 GAGTGGAATATTTGGGCCCCGGAGCCACAGGAA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156372031 33 + 157873769 GAGTGGAATAGCCGGGCCCCAGAGCCACAGGAA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188503 33 + 169853907 GAGTGGAATAACTGGGCCACGGAGCCACAGGAA i rheMac3.chr4 C 0 I 2 s macFas5.chr4 169142508 33 - 170955103 GAGTGGAATAACTGGGCCATGGAGCCACAGGAA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163959016 33 + 165299245 GAGTGGCATAGCTGGGCCACGGAGCCACAGGAA i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C a score=4018.000000 s hg38.chr6_KB021644v2_alt 166920 5 + 185823 TGCAC s panTro4.chr6 170755768 5 + 172623881 TGCAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512875 5 + 174210431 CACAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156372064 5 + 157873769 CACAC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169142541 5 - 170955103 CTCAC i macFas5.chr4 C 0 T 25 s papAnu2.chr4 163959049 5 + 165299245 CTCAC i papAnu2.chr4 C 0 T 3 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e rheMac3.chr4 168188536 2 + 169853907 I a score=13056.000000 s hg38.chr6_KB021644v2_alt 166925 24 + 185823 TTGAAatctaggagtggaatagcc s panTro4.chr6 170755773 24 + 172623881 TGGAAATCTAGGAGTGGAATAGCC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512880 24 + 174210431 TGGAAATCTAGGAGTGGAATAGCC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156372069 24 + 157873769 TGGAAATCTAGGAGTGGAATAGCC i nomLeu3.chr3 C 0 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e papAnu2.chr4 163959054 3 + 165299245 T e rheMac3.chr4 168188536 2 + 169853907 I e macFas5.chr4 169142546 25 - 170955103 T a score=13510.000000 s hg38.chr6_KB021644v2_alt 166949 18 + 185823 gggccctggagccacaga s panTro4.chr6 170755797 18 + 172623881 AGGCCACGGAGCCACAGA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512904 18 + 174210431 AGGCCACGGAGCCACAGG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156372093 18 + 157873769 GGGCCCCAGAGCCACAGG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169142521 18 - 170955103 GGGCCATGGAGCCACAGG i macFas5.chr4 T 25 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e papAnu2.chr4 163959054 3 + 165299245 T e rheMac3.chr4 168188536 2 + 169853907 I a score=2505.000000 s hg38.chr6_KB021644v2_alt 166967 3 + 185823 aat s panTro4.chr6 170755815 3 + 172623881 AAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512922 3 + 174210431 AAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156372111 3 + 157873769 AAC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169142539 3 - 170955103 AAC i macFas5.chr4 C 0 I 1 s chlSab2.chr13 96744396 3 + 98384682 tac i chlSab2.chr13 C 0 I 1 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e papAnu2.chr4 163959054 3 + 165299245 T e rheMac3.chr4 168188536 2 + 169853907 I a score=207.000000 s hg38.chr6_KB021644v2_alt 166970 1 + 185823 g s panTro4.chr6 170755818 1 + 172623881 A i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512925 1 + 174210431 G i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156372114 1 + 157873769 G i nomLeu3.chr3 C 0 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744399 1 + 98384682 I e papAnu2.chr4 163959054 3 + 165299245 T e rheMac3.chr4 168188536 2 + 169853907 I e macFas5.chr4 169142542 1 - 170955103 I a score=2038891.000000 s hg38.chr6_KB021644v2_alt 166971 852 + 185823 cacttctccaacttcagacgcagccacgttgtctcccagtcgttgcaggaatcccactcccatgagtgtggaacagttcccTTAACCCTCTCCAGGTTTCTATTTTGTTCATAAACTTACTtattagtccaaattctccagaaaaacagaaccaatgggaggtagagagatataagagcagatggattatgaacattggctcctgtaactatagaagctgaagagtcccatgatctgctgtctgcaagccggaaagattctggtgttgctgagtctgaatctgaggcctgaaggctggtgagctgctggtgttgactgaggagtccaagaccagagaacctagagctccagtgtccgagggcaggaaaggatggatgttccagcccacgg----agagagagggagggag-------------ggagggagagagagaatgtgtatttcttttccctggtaaagttgagtatcctgtactcagtttactgattcaaacattaatttcatccaaaaggatcctcacagagacatccataataaca------------tctgagcatccctcagcctagtcaagtcaacacgtaagattagccatcataATTATGTTGCTTTACAAGTACTGACataacgaattgtgatatcttgtagcataattttcatcatcttttt-tcttctttcttttgtgcctgtatttttgtgactactttatgacctttgttctttattataaggcctagacaatcttgccatattttgt-aaaaaaaatcctgctgagattataatgtgaagggcatgaaatctataaatta-tttgcagagttttgagatcttcacaatattgaatctttttatccatgaacatggtaaatatttc s panTro4.chr6 170755819 852 + 172623881 CACTTCTCCAACTTCAGACGCAGCCACATTGTCTCCCAGTCGTTGCAGGAATCCCACTCCCATGAGTGTGGAACAGTTCCCTTAACCCTCTCCAGGTTTCTATTTTGTTCATAAACTTACTtattagtccaaattctccagaaaaccagaaccaataggaggtagagagatataagaggagatggattatgaacattggctcctgtaagtatagaagctgaggagtcccatgatctgctgtctgcaagccagaaagattctggtgtagctgagtctgaatctgaggcctgaaggctggtgagctgctggtgttgactgaggagtccaagaccagagaacctggagctccagtgtccgagggcaggaaaggatggatgttccagcccacgg----agagagagggagggag-------------ggagggagagacagaatgtgtatttcttttccctggtaaagtcgagtatcctgtactcagtttactgattcaaacattaatttcatccaaaagcatcctcacagagacatccataataaca------------tctgagcatccctcagcctagtcaagttcacacgtaagattagccatcataATTATGTTGCTTTAAAAGTGCTGACataacgaattgtgatatcttatagcataattttcatcatcttttt-ttgtctttcttttgtgcctgtatttttgtgactactttatgacctttgttctttattataaggcctagacaatcttgccacattttgt-aaaaagaatcctgctgagattataatgagaagggcatgaaatctataaatta-tttgcagagttttgagatcttcacaatattgaatctttttatccatgaacatggtaaatatttc i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172512926 878 + 174210431 CACATCTCCAACTTCAGACGCAGCCACGTTGTCTCCCAGTCATTGCAGGAATCGCACTCCCAGGAATGTGGAACAGTTCCCTTAAGCTTCTCCAGGTTTCTATTTTGTTCATAAACTTACTtattagtccaaattctccagaaaaacagaaccaataggacgtagagagatataagaggagatggattacgaacattggctcctataactatagaagctgaggagtcccatgacctgccgtctgcaagccggaaagattctggtgtagctgagtctgaatctgaggcctgaaggccggtgagctgctggtgttgactgaggtgtccaagaccagagaacctagagctccagtgtccgagggcaggaaaggatgggtgttccagcccacga----agagagagggagggagggagagagagggaggagggagagagagaatgtgtatttcttttccctggtaaagtcgaatatcctgtactcagtttactgattcaaacattaatttcatccaaaagcatcctcacagagacatccacaataacatcttaccaactttctgaccatccctcagcctagtcaagttaacacataagattagccatcacaATTATGTTGCTTTAAAAGTACTGACataacgaattgtgatatcttgtagcataattttcatcatctttttgtcttctttcttttgtgcctgtatttttgtgactactttatgacctttgttctttattataaggcctagtcaatcttgccacattttgtaaaaaaaaatcctgctgagattataatgagaagggcatgaaatctataaatta-tttgcagagttttgagatcttcacaatattgaatc-ttttatccatgaacatggtaaatctttc i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156372115 861 + 157873769 CATGTCTCCAACTTCAGACGCAGCCATGTTGTCTCCCAGTCCTTGCAGGAATCGCACTCCCATGAGTGTGGAACAGTTCCCTTAACCCTCTCCAGGTTTCTATTTTGTTCATAAACTTACTtattagtccaaattctccagaaaaacagaaccaataggatgtagaaagatataagaggagatggattatgaacattggctcctgtaactatagaagctgaggagtcccatgatctgccgtctgtaagccagaaagattctggtgtagctgagtctgaatctgaggcctgaaggctggtgagctgctggtgttgactgaggagtccaagcccggagaacctagagctccagtgtctgagggcagggaaggatggaga----agcccacggagatagagagagggagggag-------------ggaaggagagagagaatgtgcatttcttttccctggtaaagtcgaatatcctgtactcagtttactgattcaaatgctaatttcatccaaaagcatcctcacagagacatccaccataacatcttaccaacttcctgagcatccctcagcctagtcacgttaacacgtaagattagccatcacaATTATGTTGCTTTAAAAGTACTGACataacgaattgtgatatcttgtagcatagttttcatcatcttttt----ttcttcttttgtgcctgtatgtttgtgactactttatgacctttgttctttattataaggcctagacaatcttgccacattttgt-aaaaaaaaacctgctaagattataatgagaagggcatgaaatctataaatta-tttgcagagttttgagttcttcacaatattgaatctttttatccatgaacatggtaaatctttc i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168188538 877 + 169853907 CACGTTTCCAACTTCAGATGCAGCCACATTTTCTCCCAGTCTTTGCAGGAATCACACTCCCATGAGTGTGGAACAGTTTTCTTAACCCTCTCCAGATTTCTATTTTGCTCATAAATTTACTtattagtccagattctccagaaaaacagaaccaataggatgtagagagatataagaggagatggattatgaccattggctcctgtaactatagaagctgaggagtcccatgatctggcgtctgcaagccagaaagattctggtgtagttgagtctgaatctgaggcctgaaggctggtgagctgctggtgttgactgaggagtccaagacctgagaacctggagctccagtgtccaaggacaggaaaggatggatgttccagcccaagg----agagggagggagtgaagaagggagggag-agagggagagagagaatgtgtatttcttttccctggtaaagtcaaatatcctgtactcagtttattgattcaaacattaatttcatccaaaagcatcctcacagagacatccacaataacatcttaccaactgtctaagcatccctcagcctagtcaagttaacacataagattagccatcacaATTATGTTGTTTTAAAAGTACTGACATAACTAACTGtgataccttgtatcataattttcatcatcttttt-tcttctttcttttgtacctgtatttttgtgactactttatgacctttgttctttattataaggcctagacaatcttgccacattttat-taaaaaaatcctgctgagattataatgagaagggcatgaaatctataaattactttgcagagttttgagatcttcacaatattgaatatttctatccatgaacatggtaaatctttc i rheMac3.chr4 I 2 C 0 s macFas5.chr4 169142543 877 - 170955103 CACGTTTCCAACTTCAGATGCAGCCACATTTTCTCCCAGTCTTTGCAGGAATCACACTCCCATGAGTGTGGAACAGTTTTCTTAACCCTCTCCAGATTTCTATTTTGCTCATAAATTTACTtattagtccagattctccagaaaaacagaaccaataggatgtagagagatataagaggagatggattatgaccattggctcctgtaactatagaagctgaggagtcccatgatctggcgtctgcaagccagaaagattctggtgtagttgagtctgaatctgaggcctgaaggctggtgagctgctggtgttgactgaggagtccaagacctgagaacctggagctccagtgtccgaggacaggaaaggatggatgttccagcccaagg----agagggagggagtgaaggagggagggag-agagggagagagagaATGTGTATTTCTTTTCCctggtaaagtcgaatatcctgtactcagtttattgattcaaacattaatttcatccaaaagcatcctcacagagacatccacaataacatcttaccaactgtctaagcatccctcagcctagtcaagttaacacataagattagccatcacaATTATGTTGTTTTAAAAGTACTGACATAACTAACTGtgataccttgtatcataattttcatcatcttttt-tcttctttcttttgtacctgtatttttgtgactactttatgacctttgttctttattataaggcctagacaatcttgccacattttat-taaaaaaatcctgctgagattataatgagaagggcatgaaatctataaattactttgcagagttttgagatcttcacaatattgaatatttctatccatgaacatggtaaatctttc i macFas5.chr4 I 1 C 0 s papAnu2.chr4 163959051 877 + 165299245 CACGTCTCCAACTTCAGATGCAGccacattttctcccagtctttgcaGGAATCACACTCCCATGAGTGTGGAACAGTTTTCTTAACCCTCTCCAGATTTCTATTTTGCTcataaattcacttattagtccagattctccagaaaaacagaaccaataggatgtagAGAGATATAAGAGGAGATGGATTATGACCATTGGCTCCTGTAACTATAGAAGCTGAGGAGTCCCATGATCTGGCGACTGCAAGCCAGAAAGATTCTGGTATAGTTGAGTCTGAATCTGAGGCCTGAAGGCTGGTGAGCTGCTGGTGTTGACTGAGGAGTCCAAGACCTGAGAACCTGGAGCTCCAGTGTCCGAGGACGGGAAAGGATGGATGTTCCAGCCcgagg----agagggagggagtgaaggagggagggag-agagggagagagagaatgtgtatttcttttcccTGGTAAAGTCGAATATCCTGTACTCAGTTTATTGATTCAAACATTAATTTCATCCAAAAGCATCCTCACAGAGACATCCACAATAACATATTACCAACTGTCTGAGCATCCCTCGGCCtagtcaagttaacacataagATTAGCCATCACAATTATGTTGTTTTAAAAGTACTGACATAACTAATTGTGATACCTTGTATCATAAttttcatcatcttttt-tcttctttcttttgtacctgtatttttgtgactactttatgacctttgttctttATTATAAGGCCTAGACAATCTTGCcacattttat-taagaaaatcctGCTGAGATTATAATGAGAAGGGCatgaaatctataaattactttgcaGAGTTTTGAGATCTTCACAATATTGAAtatttctatccatgaacatggtaaaTCTTTC i papAnu2.chr4 T 3 C 0 s chlSab2.chr13 96744400 877 + 98384682 cacgtttccaacttcagatgcagccacattttctcccagtctttgcaggaatcacactcccatgagtgtagaacagttttcTTAACCCTCTCCAGATTTCTATTTTGCTCATAAATTCACTtattagtccagattctccagaaaaacagaaccaataggatgtagagagatataagaggagatggattatgaccattggctcctgtaactatagaagctgaggagtcccatgatctggcgtctgcaagccagaaagattctggtgtagttgagtctgaatctgaggcctgaaggctggtgagctgctggtgttgactgaggagtccaagacctgagaacctggagctccagggtccaaggacaggaaaggagggatgttccagcccaagg----agagggagggagtGAagaagggagggag-agagggagagagagaATGTGTATTTCTTTTCCctggtaaagtcgaatatcctgtactcagtttattgattcaaacattaatttcatccaaaagcatcctcacagagacatccacaataacatcttaccaactgtctgagcatccctcagcctagtcaagttaacacataagattagccatcacaATTATGTTGTTTTAAAAGTACTGACATAACTAACTGtgataccttgtatcataattttcatcatcttttt-tcttctttcttttgtacctgtatttttgtgactactttatgacctttgttctttattataaggcctagacaatcttgccacattttat-taaaaaactcctgctgagattataatgagaagggcatgaaatctataaattactttacagagttttgagaacttcacagtattgaatatttcaatccatgaacatggtaaatctttc i chlSab2.chr13 I 1 C 0 e calJac3.chr4 169953685 1186 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I a score=2954383.000000 s hg38.chr6_KB021644v2_alt 167823 1072 + 185823 catttactta--tgtttttaatatgcctcaaaaatttgtaattttctctatttgtatctcatgaacattttgttagttactttctatttttgtggggtttttttctgttacatgtaatgtttctaagtcttgagttattctttttgatggtgcaagggagtataatggaattttaactgtgattgataactattttaattttt-cctattaacctatttagaatagtgcctgctctatattgaatactacataaatgtttgttaaaaaagtaaggaaagctgctcgttctctaagttaactctcgggtagctcgggaatgattacaacatcctctcttcctatcctgcactttgtgttccccgctcagtgctaacatgcacctccagcataacactgaatagaagctggggtcatgagcttccttggtttcatctgaagtcttctggggaatgttgcttccgtgtcactgtaagttctgatatttgacatggttactttagttagccataccttattggaataagagtgttcctttatatttttagttcgctaa--tttttttt---aatctcaccatgtagga-ttttttctccttgattttgttgccatagtaaattttgaaaagcattaataggttttctaacgtttttgtcttgttgacttagaatgtactcaactacatcatgatgtaaatattttagtata-ttttttctggattttctttcttaaca-ttttgtttattacttttgcatctatattcatcaataagatcgac-----atgttttatttttatgctatattttgctgggctaagattttgatatcgtattcagtgatttggggagtgttcctcatttcctggtctctggaagaatatgtgtggttatacagttatttgctcatttaatgattactagaacacatctctaaaaagactttgagccggggagacatttcttttctgtgtatacacttttaacatttatttccattaatagtcataaagaatattTGGTGAGGACTGAAAGGTGCCGAGGATCTGTCTGAAAACTGAATGCAAAGGACAAAGCGACAGCAGACGG s panTro4.chr6 170756671 1073 + 172623881 catttactta--tgtttttaatatgcctcaaaactttgtaattttctctatttgtatctcatgaacattttgttagttactttctatttttatggggtttttttctgttacatgtaatgtttctaagtcttgagttattctttttgatggtgcaagggaatataatggacttttaactgtgattgataactattttaattttt-cctattaacctatttagaatagtgcctgctctatattgaatactacataaatgtttgtttaaaaagtaaggaaagctgctcgttttctaagttaactctcgggtagctcgggagtgattacaacatcctctcttcctatcctgcaccttgtgttccccgctcagtgctaacatgcacctccagcataacactgaatagaagctggggtcatgagctcccttggtttcatctgaagtcttctggggaatgttgcttccatgtcactgtaagttctgatatttgacatggttactttagttagccataccttattggaataagagtgttcctttatatttttagttcgctaa--tttttttt---agtctcaccatgtagga-ttttttctccttgattttgttgccatagtaaattttgaaaagcattaataggttttctaacgtttttgtcttgttgacttagaatgtactcaactacatcatgatgtaaatattttagtata-ttttttctggattttctttcttaaca-ttttgttta----ttttgcatctatattcatcaataacatcgacatgtaatgttttatttttatgctatattttgctgggctaagattttgatatcgtattcagtgatttggggagtgttcctcatttcctggtctctggaagaatatgtgtggttatacacttatttgctcatttaatgattactagaacacatctctaaaaagactttgagccggggagatatttcttttctgtgtatacactttcaacatttatttccattaatagtcataaagaatattTGGTGAGGACTGAAAGGTGCCGAGGATCTGTCTGAAAACTGAATGCAAAGGACAAAGCGACAGCAGACGG i panTro4.chr6 C 0 I 566 s ponAbe2.chr6 172513804 1077 + 174210431 cattcacttatctgtttttaatatgcctcaaaaatttgtaattttctccatttgtatctcatgaacattttgttagttactttctatttttatgggttttttttctgttacatgtaatgtttctaagtcttcagttattctttttgatggtgcaagggagtataatggaattttaactgtgattgataactattttaattttt-cctattaatctatttagaatagtgcctgctctatattgaatactacataaatgtttgttaaaaaagtaaggaaagctgctcgttctctaagttaactctcgggtagctcgggagtgattacaacatcctctcttcctatcctgcaccttgtgttccccgctcagtgctaacatgca-ctctagcataacaccaaatagaagctggggtcatgagcttccttggtttcatctgaagtcttctggggaatgttgcttccatgtcactgtaagttctgatatttgacatggttactttagttagccataccttattggaataagagtgttcctttatatttttagtttgctaa--tttttttt---aatctcaccatgtaggatttttttctccttgattttgttgccatagtaaattttgaaaagcattaataggttttccaacgtttttgtcttcttgactttgaatgtactcaactatgtcatgatgtaaatattttagtata-ttttttctggattttctttcttaaca-ttttgtttattacttttgcatctatattcatcaataag--tgacatgtaatgttttatttttatgctatattttgctgggctaagattttgatatcatattcagtgatttggggagtgttcctcatttcccggtctctggaagaatatgtgtggttatacagttatttgctcatttaatgaatactagaacacatctctaaaaaaactctgagctggggagatatttcttttctgtgtatacacttttaacatttatttccattaatagtcataaagaatattTGGTGAGGATTGAAAGGTGCCGAGGATCTGTCTGAAAACTGAATGCAAAGGACAAAGCGACAGCAGACAG i ponAbe2.chr6 C 0 I 21 s nomLeu3.chr3 156372976 1039 + 157873769 cattcacttatctgtttttaatatgcctcaaaaatttgtaattttctccatttgtatctcatgaacattttgttag----tttctatttttatggg-tttttttctgttacatgtaatgtttctaagtcttgagttattcttttggatggtgcaagggagtataatggaattttaacagtgattgataactattttaattttt-cctgttaacctatttagaatagtgcctgctctatgttgagtactacataaa----tgttaaaaaaataaggaaagctgctcattctctaagttaaccctcgggtagctcgggggtgatttcaacatcctctcttccgatcctgcaccttgtgttccctgttcagtgctaacatgcacctccagcgtaacactgagtcgaagctggggtcatgagcttccttggtttcatctgaagtcttctggggaatgttgcttccatgtcactggaagttctgata-ttgacatggttactttagttagccatatcttattggaataagagtgttcctttatatttttagttcgctaa-ttttttttt---aatctcaccatgtagga-ttttttctccttgattttgttgccatagtaaattttgaaaagcgttaataggttttctaacgtttttgtcttgttgacttggaatgtactcaactacatcatgatgtaaatattttagtata-ttttttctggat----tttcctaaca-ttttgtttattacttttgcatctatattcatcaataagattgacatgtaatgtttta-ttttatgctatattttgctgggcgaagattttgatatcatattcagtgatttggggagtgttcctcatttcctggtctctggaagaatatgtgtggttatacagttatttgctcatttaatgattactagaacacatctctaaaaagactctgagccagggagatatttcttttctgtatatacacttttaacatttatttccattaatagtcataAAGAATAT--------------------------ATCTGTCTGAAAACTGAATGCAAAggacaaagtgacagcagacgg i nomLeu3.chr3 C 0 I 21 s rheMac3.chr4 168189415 1073 + 169853907 cattcacttatctgtttttaatatgcctcaaaaatttgtaattttctccatttctatctcatgaaaattttgtcac----tttctgtttttatgttttttttttctgttacatgtaatgtttctaagtcttgagttattctttttggtggtgcaagggagtataatggaattttagctgtgatcaataactattttaatttttccctattaacctatttagaatagtgcctgctctatattgaataccacataaatgtttgtt-aaaaattaaggaaagctgctcgttctctaacttaactctcgggtagctctagcgtgattacgacatcctctcttcctatcctgcaccttgcactccccactcagtgctaacatgcatctccagcgtaacactgagtagaagctgggatcatgagcttccttggtttcatctgaagtcttctagggaatgttgcttccatgtcactgtaatttctgatatttgacatggttactttagttagccataccctactggaataagagtattcttttatatttttagcttgctaa--ttttttttaaaaatctcaccatgaaggatttttttctccttgagtttgttgccatagtaaattttgaaaaccattaatagattttctaacctttttgtcttgctgacttagaatgtactcaactatgtcatgatgtaaatattttagtatatttttttctggattttctttcttaaca-ttttgtttattacttttgcatctatattcatcaataagatagacatgtaatgttttatttttatgctgtattttgctgggctaagattttgatatcatattcagtgatttggggagtgttcctcatttcctggtctctggaagaatatgtgtggttatacagttatttgctcat-------ttaacagaacacatctctaaaaagactctgagccggggagatagttcttttctgtgtatacacttttaacatgtatttccattaatagtcataaagaatattTGGCGAAGATTGAAAGGTGCTGAGGATCTGTCTGAAAACTGAATGCCATGGACAAAGTGACAACACATGG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169143420 1072 - 170955103 cattcacttatctgtttttaatatgcctcaaaaatttgttattttcTCCATTTCTATCTCATGAAAATTTTGTCAC----TTTCTGTTTTTATG-TTTTTTTTCCTGTTACATGTAATGTTTCTAAGTCTTGAGTTATTCTTTTTGGTGGTGCAAGGGAGTATAATGGAATTTTAGCTGTGATCAATAACTATTTTAATTTTTCCCTATTAACCTATTTAGAATAGTGCCTGCTCTATATTGAATACCACATAAATGTTTGTT-AAAAATTAAGGAAAGCTGCTCGTTCTCTAAGTTAACTCTCGGGTAGCTCTAGCGTGATTACGACATCCTCTCTTCCTATCCTGCGCCTTGCACTCCCCACTCAGTGCTAACATGCATCTCCAGCGTAACACTGAGTAGAAGCTGGGATCATGAGCTTCCTTGGTTTCATCTGAAGTCTTCTAGGGAATGTTGCTTCCATGTCACTGTAATTTCTGATATTTGACATGGTTACTTTAGTTAGCCATACCCTACTGGAATAAGAGTATTCTTTTATATTTTTAGCTTGCTAA--TTTTTTTTAAAAATCTCACCATGAAGGATTtttttctccttgagtttgttgccatagtaaattttgaaaaccattaatagattttctaacctttttgtcttgctgacttagaatgtactcaactatgtcatgatgtaaatattttagtatatttttttctggattttctttcttaaca-ttttgtttattacttttgcatctatattcatcaataagatagacatgtaatgttttatttttatgctgtattttgctgggctaagattttgatatcatattcagtgatttggggagtgttcctcatttcctggtctctggaagaatatgtgtggttatacagttatttgctcat-------ttaacagaacacatctctaaaaagactctgagccggggagatagttcttttctgtgtatacacttttaacatgtatttccattaatagtcataaagaatattTGGCGAAGATTGAAAGGTGCTGAGGATCTGTCTGAAAACTGAATGCCATGGACAAAGTGACAACACATGG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163959928 1074 + 165299245 CATTCACTTATCTGTTTTTAATATGCCTcaaaaatttgtaattttctccttttctatctcatgaaaattttgtcac----tttctgtttttatg-gttttttttctgCTACATGTAATGTTTCTAAGTCTTGAGTTATTCTTTTTGATGGTGCAAGGGAGTATAATGGAATTTTAGCTGTGATcaataactattttaattttt-cctattaacctatttagaatagtgcctgcTGTATATTGAATACcacataaatgtttgtt-aaaaaataaggaaagctgTTCGTTCTCTAAGTTAACTCTCGGGTAGCTCTGGCGTGATTACGACATCCTCTCTTCCTATCCTGCACCTTGCACTCCCCACTCAGTGCTAACGTGCATCTCCAGCGTAACACTGAGTAG-AGCTGGGATCATGAGCTTCCTTGGTTTCATCTGAAGTCTTCTAGGGAATGTTGCTTCCATGTCACTGTAATTTCTCATATTTGACATGGTTACTTTAGTTAGCCATACCTTATTGGAATAAgagtattcttttatatttttagtttgctaa--tttttttt--taatctcaccatgtaggatttttttctccttgagttTGTTGCCatagtaaattttgaaaagcattaaTAGATTTTCTAACCTTTTTGTCTTGCTGACTTAGAATGTACTCAACTATGTCatgatgtaaatattttagtata-ttttttctggattttctttcttaaca-ttttgtttattacttttgcatctatattcatcaataAGACTGacatgtaatgttttatttttatgctgtATTTTGCTGGGCTAAGATTTTGATATCATATTCAGTGATTTGGGGAGTGTTCCTCATTTCCTGGTCTCTGGAAGAATATGTGTGGTTATACAGTTATTTGCTCATTTAATGATTAACAGAACACATCTCTAAAAAGACTCTGAGCTGGGGAGATACTTCTTTTCTGTGTATACACTTTTAACATGTATTTCCATTAATAGTCATAAAGAACATTTGGCGAGGATTGAAAGGTGCCGAGGATCTGTCTGAAAACTGAATGCCATGGACAAAGTGACAACACACGG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96745277 1076 + 98384682 cattcacttatctgttttaaatatgcctcaaaaatttgtaattttcTCCATTTCTATCTCATGAAAAttttgtcac----tttctgtttttatg-tttttttttctgttacatgtaatgtttctaagtcttgagttgttctttttgatgGTGCAAGGGAGTATAATGGAATTTTAGCTGTGATCAATAACTATTTTAATTTTT-CCTATTAACCTATTTAGAATAGTGCCTGCTGTATATTGAATACCACATAAATGTTTGTTAAAAAAATAAGGAAAGCTGCTCGTTCTCTAAGTTAACTCTCGAGTAGCTCTGGAGTGATTATGACATCCTCTCTTCCTATCCTGCACCTTGCACTCCCCACTCAGTGCTAACATGCATCTCCAGCATAACACTGAATAGAAGCGGGGATCATGAGCTTCCTTGGTTTCATGTGAAGTCTTCTAGGGAATGTTGCTTCCATGTCACTGTAATTTCTCATATTTGACATCGTTACTTTAGTGAGCCATACCTTATTGGAATAAGAGTATTCTTTTATATTTTTAGTTTGCTAA--TTTTTTTT-TTAATCTCACCATGTAGGATTtttttctccttgagtttgttgccatagtaaattttgaaaagcattaatagattttctaatgtttttgtcttgctgacttagaatgtactcaactatgtcatgatgtaaatattttagtata-atttttctggattttctttcttaaca-ttttgtttattacttttgcatctatatgcat-aataagattgacatgtaatgttttatttttatgctgtattttgctgggctaagattttgatatcatattcagtgatttgagaagtgttcctcatttcctggtctctggaagaatatgtgtggttatacagttatttgctgatttaatgattaccagaacacatctctaaaaagactctgagccagggagatatttcttttctgtgtatgtacttttaacatgtatttccattaatagtcataaagaatattTGGCGAGGATTGAAAGGTGCCGAGGATCTGTCTGAAAACTGAATGCAATGGACAAAGTGACAACACATGG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169954871 1033 + 171630274 ----cACTTACCTGTTTTTAATATGCC-----------------TCTCCATTTGTATCTCATGAAAACTTCATTAGTTACCTTTTATTTCTACATTTTTTTTTTCTGTTACATGTAATGTTTCTAAGTACTGAGGT-TTCTTTTTGATAGTG-AAGGGAGTATAAAGGAATTTTGGCTGTGATGGATAACCGTTTCGATTTTTTTCTATTAACCTATTTAGAATAGTG---------------------CATGAATGTTTGTTAAACGCATAAGGAAAGCTGCTCGTTCTCTAGCTTAGCTCTCAGGTAGCTCAGGAGTGATTACGATGCCCTCTCTCCCTACCCTGCACCTTGTGTTCCC-GCTCAGAGCTAACGTGAAGttcaagcataatgttgaaaagaagctgtgatcttgggcttccttggattcatccggagtcttccagggaaagctgcttccatgttactgtaagttctgctgtttgacatggttactttagttagacaccccttattgggataagagtgttcctttatatttttagtttgccaaaattttatttttaaacctcgccatgtagga-tcttttctccttgattttgttgccctggtaaattttgaaaagtatgaacagactttctaatgttgttgtcttgcggacttagaatgtactcaactacgtcatgatgtaaatattttagtat--ttttttctgcattttctttcttaacatttttgtttattacttttgcatctatattcatcaataaaattggcatgtaattttttatttttatgctacatttt-ctgggctgagactttggtatcttattcagtgattcagggagtgttccttattttctggtctccggaagaatgtgtg-ggttaga-agttatttgtctgtttaatgattaccagaacacatctctaaaaagactc--ggcctgggaggtatttctttTCTGTGTATGCACTTTTAACGTTTATTTCCATTAATGATCAT-AAGAGCATTTGGTGAGGGTTG-AAGGTGCCAAGGATCTGTCTGAAAAGTTAATGCCAAGGATGAAGTGACAGCAGACCC i calJac3.chr4 I 1186 C 0 e canFam3.chr1 56226451 371 + 122678785 I a score=531162.000000 s hg38.chr6_KB021644v2_alt 168895 227 + 185823 GGCaggcgagacgtgaggcgagacgtgaggcgagccgtgaggcaagccgGCTCATAAACGCTCCTAACGGGGAAAACAGACGAACGA-GGAGTTGGTGATAATATCAGCCAGTAACACCTGTTAA--------GGCTTCCTGGCTCCCAGGCACTTGAGAACTATACTTCTCCAAa----ttaggttggttctgttatcttccttctacagatagggaaactgaggcatggcgcatttaa s panTro4.chr6 170758310 229 + 172623881 ggcaggggagacgtgaggcgaggc---aggcgcgacgtgaggcgagCCGGCTCATAAACGCGCCCAACGGGGAAAACAGACGAATGAAGGAGTTGGTGATAATATCAGCCACTAACACCTGTTAA--------GGCTTCATGGCTCCCAGGCACTTGAGAAGTAtacttctccaaacaccttaggttggttctgttatcttccttctacagatagggaaactgaggcatggcgcatttaa i panTro4.chr6 I 566 C 0 s ponAbe2.chr6 172514902 206 + 174210431 GGCAGGGGAGACGTGAGGCGAGGC---AGGGGAGACATGAGACGAGCCGGCTCGTAAACGCTTCTAACGGGGAAAACAGACG-------------------------------AACACCTGTTAAGGCTTCATGGCTTCATGGCTCCCAGGCGCTTGAGAAGTAtacttctccaaacaccttaggttggttctgttatcttccttctacagatagggaaactgaggcatggcacatttaa i ponAbe2.chr6 I 21 C 0 s nomLeu3.chr3 156374036 229 + 157873769 ggcaggggagatgtgagGCAAGGC---AGGGGAGACGTGAGGCGAGCCGGCTCGTAAACGCTCCTAACGGGGAAAACAGACGAATGAAGGAGCTGGTGATAATATCAGCCACTAACACCTGTTAA--------GGCTTCGTGGCTCCCAGGTGCTTGAGAAGTAtacttctccaaacaccttaggttggttctgttatcttccttctacagacagggaaactgaggcatggtgcgtttaa i nomLeu3.chr3 I 21 C 0 s rheMac3.chr4 168190488 214 + 169853907 GGCAGAGGAGACGTGAGGCGACAC---CGGG------------CAGCCTGTTCGTAAATGCTCCTAAAGGGGAAAACAGAGGAATGAAGGAGCTACTGATAATATCAACCACTAACACCTGTTAA--------GGCTTCATGGCTCTCAGGCACTTGAGAAGTAtacttctccaaacaccttaggtcggtgctgttatcttccttctacagatagggaaactgaggcatggtgcgtt--- i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169144492 214 - 170955103 GGCAGAGGAGACGTGAGGCGACAC---CGGG------------CAGCCTGTTCGTAAATGCTCCTAAAGGGGAAAACAGAGGAATGAAGGAGCTACTGATAATATCAACCACTAACACCTGTTAA--------GGCTTCATGGCTCTCAGGCACTTGAGAAGTATACTTCTCCAAACACCTTaggttggtgctgttatcttccttctacagatagggaaactgaggcatggtgcgtt--- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163961002 214 + 165299245 GGCAGAGGAGACATGAGGCGATGC---TGGG------------CAGCCTGCTCATAAATGCTCCTAAAGGGGAAAACAGAGGAATGAAGGAGCTAGTGATAATATCAACCACTAACACCTATTAA--------GACTTCATGGCTCTCAGGCGCTTGAGAAGTATACTTCTCCAAACACCTTAGGTTGGTGCTGTTATCTTCCTtctacagatagggaaactgaggcatggtgCGTT--- i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96746353 217 + 98384682 GGCAGGGGAGACATGAGGCGACGC---CAGG------------CAGCCTGCTCGTAAATGCTCCTCAAGGGGAAAACAGAGGAATGAAGGAGCTACTGATAATATCAACCACTAACACCTATTAA--------GGCTTCATGGCTCTCAGGCGCTTGAGAAGTATACTTCTCCAAACACCTTaggttggtgctgttatcttccttctacagatagggaaactgaggcatggtgcatttaa i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169955904 216 + 171630274 AGCAGGGGAGAGGTGAAGCGAGGC---GGGG------------CAGCCCCTGTGTAAACGCTCCCAGTGGGGAAAACAGATGAA-GACAGGGAGAGTCATCATGCCAACCACTGACCCCTGCTAA--------GGCTTCATGGCTCCCAGACACTGGAGAAGGATACTTCCCCAGACACCTtaggtgcgtgctgttgtccttcttctacagataggaaaactgaggcatggCACATTTAA i calJac3.chr4 C 0 I 297 e canFam3.chr1 56226451 371 + 122678785 I a score=8194.000000 s hg38.chr6_KB021644v2_alt 169122 4 + 185823 ctaa s panTro4.chr6 170758539 4 + 172623881 ctaa i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172515108 4 + 174210431 ctaa i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156374265 4 + 157873769 ctaa i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168190702 3 + 169853907 -taa i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169144706 3 - 170955103 -taa i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163961216 3 + 165299245 -TAA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96746570 4 + 98384682 ctaa i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169956120 297 + 171630274 I e canFam3.chr1 56226451 371 + 122678785 I a score=2087244.000000 s hg38.chr6_KB021644v2_alt 169126 727 + 185823 gaggtcttggatcccacagtccttagtggtggagccgggatttaaaaccaggcaacctgacaccccagcgggtgctgtcaacTCTGTCTCACGTTTTTTACTGAGGGTGTCTGTGCCCAGCATGCTTCAGGAGGTCACTCCCTGGTGCTGAAGGAAGGCACAGGCCTTCGGGGATCAGTAAGTGACGGGCAGTATGTACATGTCATAGCACACGCCTGTGTATAGTCTTGTGAATTTCAAAGCATCCAGGATGAAGTTAGGGAGCCAGAGGGAAGGAACAAAATTCCAACTGCTTTCAGAAAGAAAGGCGCTAACTCAAAAAGCAGCAAGCAGCGAGCAGCAGTGATCAGGTTGGCATGAAATTGTATTGGTTGTTGCATCCTGGAGGCAGTGGGGTTAGATGTGTA-AAGATCGGAGGAACGGTGACAGGTACCCCTGGCTTGCCAAACTCTTTCACTGTCTGAACTCAAGAACCAAACAGATTTGGATTTCTTGGTATTGCCCAATAGCAAACTGGC-TATCAGGTTCCAATTACACTCACATTcttcatccacaga-caccagaa--actcttgtgtccaaaaaattaaatttatttaactttctgagacaaggaagagtggaattaaaatgaaccaggaaaccctttcaataaggggg-agttaagaggggcttctgataggataggggcttgtgctaggtgatcccaaggagagattaaggagagggg s panTro4.chr6 170758543 714 + 172623881 gaggtcttggatcccacagtccttagtggtggagccgggatttaaaaccaggcaacctgacaccccagcgggtgctgtcaacTCTGTCTCACGTGTTTTACTGAGGGTGCCTGTGCCCAGCATGCTTCAGGAGGTCACTCCCTGGTGCTGAAGGAAGGCACAGGCCTTCGGGGATCAGTAAGTGACCGGCAGTATGTACATGTCATAGCACACGCCTGTGTACAGTCTTGTGAATTTCAAAGCATCCAGGATGAAGTTAGGGAGCCAGAGGGAAGGAACAAAATTCCAGCTGCTTTCAGAAAGAAAGACACTAACTCAAAAAGCAGCG--------------GTGATCAGGTTGGCATGAAATTGTATTGGTTGTTGCATCCTGGAGGCAGTGGGGTTAGATGTGTATAAGATCGGAGGAACGGTGACAGGTACCCCTGGCTTGCCAAACTCTTTCACTGTCTGAACTCAAGAACCAAACAGATTTGGATTTCATGGTATTGCCCAATAGCAGACTGGC-TATCAGGTTCCAATTACACTCACATTcttcatccacaga-caccagaa--acacttgtgtccaaaacattaaatttatttaactttctgagacaaggaagagcggaattaaaatgaaccaggaaaccctttcaataaggggg-agttaagaggggcttctgataggataggggcttgtgctaggtgatcccaaggagagattaaggagagggg i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172515112 711 + 174210431 gaggtcttggatcccacagtccttagtggtggagccagcatttaaaaccaggcaacctgacaccccagcgggtgctctcaacTCTGTCTCACGTTTTTTACCGAGGGTGCCTGTGACCAGCACGCTTCAGGAGGTCACTCCCTGGTGCTGAAGGAAGGCACAGGCCTTCGGGGATCAGTAAGTGACTGGCAGTATGTACATGTCATAGCACACGCCTGTGTACAGTCTTGTGAATTTCAAAGCATCCAGGATGAAGTTAGGGAGCCAGAGGGAAGGAACCAAATTCCAACTGCTTTCAGAAAGAAAGACACTAACTCAAAAAGCAGCG--------------GTGCTCAGGTTGGCATGAAATCGTATTGGTTGTTGCATCCTGGAGGCAGTGGGGTTAGATGTGTA-AAGATCGGAGGAACGGTGACAGGCACCTCTGGCTTGCCAAACACTTTCACTGTCTGAACTCAAGAACCAAACAGATCTGGATTTCATGGTATTGCCCAATAGCAAACTGGC-TATCAGGTTCCAATTACACTCACTTTcttcatccaaaga-caccagaa--acacttgtgtccaaaaaattaaatttatttaactttctgagacaaagaagagtggaattaagatgaaccaggaaaccctttcaataaggggg-agt--ggaggggcttctgataggatgggggcttgtgctaggtgatcccaaggagagattaaggagagggg i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156374269 713 + 157873769 gaggtcttggatcccacagtccttagtggtggagccgggatttaaaaccaggcaacctgacaccccagcgggtgctctcaacTCTGTCTCACGTTTTTTACCGAGGGTGCCTGTGCCCAGCACACTTCAGGAGGTCACtccctggtgctgaaggaaggcacaggccttcggggatcagtaagtgaccggcagtaggtacatgtcgtagcacacgcctgtgtacagtcttgtgaatttcaaagcatccaggatgaagttagggagccagagggaaggaacaaaattccaactgctttcagaaagaaagacactaactcaaaaagcagcg--------------gtgatcaggttggcatgaaattgttttggttgttgcatcctggaggcagtggggttagatgtgta-aagatcggaggaaCGGTGACAGACACCCCTGGCTTGCCAAACACTTTCACTGTCTGAACTCAAGAACCAAACAGATTTGGATTTCATGGTATTGCCCAATAGCAAACTGGC-TATCAGATTCCAATTACACTCACATTcttcatccacaga-caccagaa--acacttgtgtccaaaaaattaaatttatttaactttctgagacaagtaagagtggaattaaaatgaaccacgaaaccctttcaaaaaggggg-agttaagaggggcttctgataggataggggcttgtgctaggtgatcccaaggagagattaaggagagagg i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168190705 714 + 169853907 gaggttttggatcccacagtccttagcggtggagccgggatttaaaagcaggcaacctgacaccccagcgggtgctcttaacTCTGTCTCACATTTTTTACCGAGGGTTCCTGTGCCCACCAAGCTTCAGGAAGTCACTCCCTGGTGCTGAAAGAAGGCACAGGCCTTCGGGGATCAGTAAGTGACTGGCAGTATGTACATGTAGTAGTACATGCCTGCGTACAGTCTTGTGAATTTCAAAGCATCCAGGATGAAGTTAGGGAACCAGAAGGAATGAACAAAATTCCAACTGCTTTCAGAAAGAAAGACACTAACTCAAAAAGCAGCA--------------GTAATCAGGTTGGCATGAAATTGTGTTGGTTGTTGCATCCTGGAGGCAGTGGGGTTAGATGTGTA-AAGATGTGAGGAACAGTGACAGGCACCCCCGGCTTGCCAAACACTTTCACTGTCTGAACTCAAGAACCAAACAGATCTGGATTTCATGGTATTGCCCGAGAGCAAACTGGC-TACCAGGTTCCAATTACACTCACgttcttcatccaaagaccatcagga--acacttgtgtccaaaaagttagatttatttaattttctgagacaagcaagagtggaattaaaatgaaccaggaaaccctttcaataaggggg-agttaagaggggcttctgaaagcatgggggcttgtgctaggtgattccaaagagagattaaggaGAGGGG i rheMac3.chr4 C 0 I 214 s macFas5.chr4 169144709 714 - 170955103 gaggttttggatcccacagtccttagcggtggagccgggatttaaaagcaggcaacctgacaccccagcgggtgctcttaacTCTGTCTCACATTTTTTACCGAGGGTTCCTGTGCCCACCAAGCTTCAGGAAGTCACTCCCTGGTGCTGAAAGAAGGCACAGGCCTTCGGGGATCAGTAAGTGACTGGCAGTATGTACATGTAGTAGTACATGCCTGCGTACAGTCTTGTGAATTTCAAAGCATCCAGGATGAAGTTAGGGAACCAGAGGGAATGAACAAAATTCCAACTGCTTTCAGAAAGAAAGACACTAACTCAAAAAGCAGCA--------------GTAATCAGGTTGGCATGAAATTGTGTTGGTTGTTGCATCCTGGAGGCAGTGGGGTTAGATGTGTA-AAGATGTGAGGAACAGTGACAGGCACCCCCGGCTTGCCAAACACTTTCACTGTCTGAACTCAAGAACCAAACAGATCTGGATTTCATGGTATTGCCCGAGAGCAAACTGGC-TACCAGGTTCCAATTACACTCACgttcttcatccaaagaccatcagga--acacttgtgtccaaaaagttagatttatttaattttctgagacaagcaagagtggaattaaaatgaaccaggaaaccctttcaataaggggg-agttaagaggggcttctgaaagcatgggggcttgtgctaggtgattccaaagagagattaaggaGAGGGG i macFas5.chr4 C 0 I 214 s papAnu2.chr4 163961219 713 + 165299245 GAGGTTTTGGATCCCACAGTCCTTAGCGGTGGAGCCGGGATTTAAAAGCAGGCAACCTGACACCCCAGCGGGTGCTCTTAACTCTGTCTCACATTTTTTACCGAGGGTTCCTGTGCCCAGCACGCTTCAGGAGGTCACTCCCTGGTGCTGAAAGAAGGCACAGGCCTTCGGGGATCAGTAAGTGACTGGCAGTATGTACCTGTAGTAGTACATGCCTGCGTATAGTCTTGTGAATTTCAAAGCATCCAGGATGAAGTTAGGGAACCAGAGGGAATGAACAAAATTCCAAATGCTTTCAGAAAGAAAGACACTAACTCAAAAAGCAGCA--------------GTAATCAGGTAGGCATGAAATTGTGTTGGTTGTTGCATCCTGGAGGCAGTGCGGTTAGATGTGTA-AAGATGTGAGGAACGGTGACAGGCACCCCCGGCTTGCCAAACACTTTCACTGTCTGAACTCAAGAACCAAACAGATCTGGATTTCATGGTATTGCCCGAGAGCAAACTGGC-TACCAGGTTCCAATTACACTCACGTTGTTCATCCAAAGACCACCAGGA--ACGCTTGTGTCCAAAAAGTTAGATTTATTTAACTTTCTGAGACAAGCAAGAGTGGAATTAAAATGAACCAGGAAACCCTTTCAATAAGGGGG-AGTTAAGAGGGGCTTCTGAAAGCACGGGGGCTTGTGCTAGGTGATTCTAAAGAGAGATTAAGGAGAGGG- i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96746574 714 + 98384682 gaggtcttggatcccacagtccttagtggtggagctgggatttaaaaccaggcaacctgacaccgcagtgggtgctcttaacTCTGTCTCACATTTTTTACCGAGGGTGCCTGTGCCCAGCAGGCTTCAGGAGGTCACTCCCTGGTGCTGAAAGAAGGCACAGGCCTTCGGAGATCAGTAAGTAACTGGCAGTATGTACATGTAGTAGCACATGCCTGCATACAGTCTTGTGAATTTCAAAGCATCCAGGATAAAGTTAGGGAACCAGAGCGAATGAACAAAATTCCAAATGCTTTCAGAAAGAAAGACACTAACTCAAAAAGCAGCA--------------GTAATCAGGTTGGCATGAAATTGTGTTGGTTGTTGCATCCTGGAGGCAGTGGGGTTAGATGTGTA-AAGATGTGAGGAACGGTGACAGGCACCCCCGGCTTGCCAAACACTTTCACTGTCTGAACTCAAGAACCAAACAGATCTGGATTTCATGGTATTGCCCAAGAGCAAACTGGC-TACCGGGTTCCAATTACACTCACgttcttcatccaaagaccaccagga--acacttgtgtccaaaaagttagatttatttaactttctgagacaagcaagagtggaattaaaatgaaccaggaaaccctttcaataaggggg-agttaagaggggcttctgaaagcatgggggcttgtgctaggtgattctaaagagagattaaggaGAGGGG i chlSab2.chr13 C 0 I 127 s calJac3.chr4 169956417 707 + 171630274 gagctttcagatcacatggtccttagtggtggatccggaatttaaaaccaggcatcttgacaccccagcgggtgctcttaCCTGTGTCTCCTGTTGTTTACCGAGGGTGCCTGTGCCCAGCACGCTTCAGGAGGTCACTCCCTG-------AAGGACGCACAGGCCTTCGGGGCTCAGTCAGTGACATGCAGCATGTACATGTGCTAGCGCATGCTGG--TCCAGTCTTGTGAATTTCAAAGCATCCAGGATAAAGTTAGGGAGCCAGAGGGAATGAAGAAAATTCCAAATACTTTCAGAAAAAAAGACACGAACTCAAAAAGCAGCG--------------GTGATCAGCCTGGCACGAAACCTTCTTGGTTGCTGCACCCTGGGGGCAGTGGGGTTCGAGGTGGG-GAGATCGGAGGAACTGTGACAGGCAGCCCCGGCATGCCAGACACTTTCACTGTCTGAACTCAAGAAACCAGCACATCTGGATTTCGTGGAATTGCCCAAAAGCAAACTGGCTTGTCAGGTTCCAATTACACTCACATTcttcattcaaagaccaccagaaacacacttgtatcaaaaaagtcaggtttatttaactttctgagacagggaatagtggaattaaaatgaaccagaaaactctttcagtaagggggcagtgaagaggggcttctgatggcat-ggggcttgtgctagatgatcccaaggagagGAT-AGGAGAGGGC i calJac3.chr4 I 297 C 0 e canFam3.chr1 56226451 371 + 122678785 I a score=1192001.000000 s hg38.chr6_KB021644v2_alt 169853 451 + 185823 agcCAATGCTTGATGGGTGAAGATATCTTCATGCATTTCGTCCTGAGAGGGGAGATTCAAGAGGGGCGCGCGTGGCCACGGATGAAGTGTCAGGCGTCCCTGTTAGTCCAAGGGGGCTGCAGGGTGGTGTCTGATGTGTGGTGGGTTTGCCTCCCTCCTGCTCCAGGCCCTGCCGCGGTGTGGTCTCAGCTCAGCATCGCTGCTGCCCTCTGAGCCTGGCTGGTCC----TCAATTAGGAACAGCAAGATCTGGCTGTCGGCAGAGCATTTCCTC--TTTCTGAAAATCCAGGGTTTTCACAGACTCAGACACCACAGTTTCTGCCTCAAATTCAGGCAAATTGGTTTGGCAGAAAAAACATATAAAATGTAAATTTGCATTCTTTCTTTATAGTATTTTCTCTTTGTTTCAGATAGGAATAGAAGCCCTTTGTGATTTATTGATTTAGAGGGtttt- s panTro4.chr6 170759257 447 + 172623881 agcCAATGCTTGATGGGTGAAGATATCTTCATACATTTCGTCCTGAGAGGGGAGATTCGAGAGGGGCGTGCGTGGCCACGGATGAAGTGGCAGGCGTCCCTGTTAGTCTAAGGGGGCTGCAGGGTGGTGTCTGATGTGTGGTGGGTTTGCCTCCCTCCTGCTCCAGGCCCTGCCGCGGTGTGGTCTCAGCTCAGCATCGCTGCTGCCCTCTGAGCCTGGCTGGTCC----TCAATTAGGAACAGCAAGATCTGGCTGTCGGCAGAGCATTTCCTC--TTTCTGAAAATCCAGGGGTTACACAGACTCAGACACCACAGTTTCTGCCTCAAATTCAGGCAAATTGGTTTGGCAGAAAAAACATATAAAATGTAAATTTGCATTCTTTCTTTATAGTATTTTCTCTTTGTTTCAGATAGGAATAGAAGCCCTTTGTGATTTATT----TAGAGGGTTTT- i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172515823 450 + 174210431 agcCAATGCTTGATGGGTGAAGATACCTCCATACATTTCATCCCGAGAGGGGAGATTCGAGTGGGGTGTGCGTGGCCACGGATGAAGTGGCAGCCATCCCTGTTAGTCCGAGGGGGCTGCCGGGTGGTGTCTGATGTGTGGTGGGTTTGCCTCCCTCCTGCTCCAGGCCCTGCCGTGGTTTGGTCTCAGCTCAGTATCGCTGCTGCCCTCTGAGCCTGGATGGTCC----TCAATTAGGAACAGCGAGATCTGGCTGTCGCCAGAGCATTTCCTC--TTTCTGAAAATCCAGGGGTTACACAGACTCAGACACCACAGTTTCTGCCTCGAATTCAGGCAAATTGGTTTGGCAGAAAAAACATATAAAATGTAAATTTGCATTCTTTCTTCATAATGTTTTCTCTTTGTTTCAGATAGGAATAGAAGCCCTTTTCCATTTATTGATTTAGAGGG-TTT- i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156374982 442 + 157873769 agcCAATGCTTGATGGGTAAAGATACCTTCATACATTTCGTCCTGAGAGGGGAGATTCGAGTGGGGCGTGCGTGGCCACGGATGAAGTAGCAGGCGTCCCTGTTAGTCCGAGGGGGCTGCAGGGTGGTGTCTGACGTGTGGTGGGTTTTCCTCGCTCCTGCTTCAGGCCCTGCTGCGGTGTGGTCTCAGCTCAGCATCGCTGCTGCCCTCTGAGCCTGGCTGGTCC----TC----AGGAACAGCAAGTTCTGGCTGTCGGCAGAGCATTTCCTC--TTTCTGAAAATCCAGGGGTTACACAGACTCAGACACCACAGTTTCTGCCTTGAATTCAGGCAAATTGATTTGGCAGTAAAAACATATAAAATGTAAATTTGCATTCTTT----ATAGTATTTTCTCTTCGTTTCAGATAGGAATAGAAGCCCCTTGTCATTTATTGATTTAGAGGG-TTT- i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168191633 442 + 169853907 AGCCAATGCTGGATGGATGAAGATACCGTCATACATGTCGTCCCGAGAGGGGAGATTCAAGT-GGGCGCATGTGGGCACAGATGAAGTGGCAGGTGTCCCTGTTAGTCCGA-GGGGCTGCATGGTGGTATCTGATATGTGGTGGGATTGCCTCCCTCCTGCTCCAGGCCCCGCTGCAGTGTGGTTTCAGCTCAGCATCACTGCTGCCCTCTGAGCCTGGCTGGTCC----TC----AGGAACAGCAAGATCTGGCTGTCGGCAGAGTCTTTCCTC--TTTCCGAAAACCCAGGGGTTACACAGACTCAGACACCACAGTTTCTGCCTCGGATTCAGGCAAATTGGTTTGGCAGAAAAAACATACAAAATGTAAATTTGCATTCTTT--TTATAGTATTTTCTCTTAGTTTCAGATAGGAATAGAAGCCATTTGTCATTTATTGATTTAGAGGG-TTT- i rheMac3.chr4 I 214 C 0 s macFas5.chr4 169145637 442 - 170955103 AGCCAATGCTGGATGGATGAAGATACCGTCATACATGTCGTCCCGAGAGGGGAGATTCAAGT-GGGCGCATGTGGGCACGGATGAAGTGGCAGGTGTCCCTGTTAGTCCGA-GGGGCTGCATGGTGGTATCTGATATGTGGTGGGATTGCCTCCCTCCTGCTCCAGGCCCCGCTGCAGTGTGGTCTCAGCTCAGCATCACTGCTGCCCTCTGAGCCTGGCTGGTCC----TC----AGGAACAGCAAGATCTGGCTGTCGGCAGAGTCTTTCCTC--TTTCCGAAAACCCAGGGGTTACACAGACTCAGACACCACAGTTTCTGCCTCGGATTCAGGCAAATTGGTTTGGCAGAAAAAACATACAAAATGTAAATTTGCATTCTTT--TTATAGTATTTTCTCTTAGTTTCAGATAGGAATAGAAGCCATTTGTCATTTATTGATTTAGAGGG-TTT- i macFas5.chr4 I 214 C 0 s papAnu2.chr4 163961932 444 + 165299245 AGCCAATGCTGGATGGATGAAGATACCGTCGTACATGTCCTCCCGAGAGGGGAGATTCAAGT-GGGCGCATGTGGGCACGGATGAAGTGGCAGGCGTCCCTGTTAGTCCGA-GGGGCTGCATGGTGGTATCTGATATGTGGTGGGATtgcctccctcctgctccaggcCCCGCTGCAGTGTGGTCTCAGCTCAGCATCACTGCTGCCCTCTAAGCCTGGCTGGTCC----TC----AGGAACAGCAAGATCTGGCTGTCGGCAGAGTCTTTCCTC--TTTCCGAAAACCCAGGGGTTACACAGACTCAGACACCACAGTTTCTGCCTCGGATTCAGGCAAATTGGTTTGGcagaaaaaacatacaaaatgtaaATTTGCATTCTTTCCTTATAGTACTTTCTCTTAGTTTCAGATAGGAATAGAAGCCATTTGTCATTTATTGatttagaggt-ttt- i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96747415 448 + 98384682 AGCCAATGCTGGATGGATGAAGATACCGTCATACATGTAGTCCCGAGAGGGGAGATTCAAGT-GGGCGTGTGTGGGCACGGATGAAGTGGCAGGTGTCCCTCTTAGTCCGA-GGGGCTGCATGGTGGTATCTGATATGTGGTGGGTTTGCCTCTCCCCTGCTCCAGGCCCCGCTGCAGTGTGGTCTCAGCTCAGCATCACTGCTGCCCTCTGAGCCTGGCTGGTCCTCAGTC----AGGAACAGCAAGATCTGGCTGTCGGCAGAGTCTTTCCTC--TTTCTGAAAATCCAGAGGTTACACAGACTCAGACACCACAGTTTCTGCCTTGGATTCAGGCAAATTGGTTTGGCAGAAAAAACATACAAAATGTAAATTTGCATTCTTTCTTTATAGTATTTTCTCTTAGTTTCAGATAGGAATAGAAGCCATTTGTCATTTATTGATTTAGAGGG-TTT- i chlSab2.chr13 I 127 C 0 s calJac3.chr4 169957124 412 + 171630274 AGCCCGTGGCTGATGGGTG-AGATACCGTTGTACATTTGGTCCTGAGCCGGGAGATTCGAGTGGGGCGCGCG---------------------------------GCCCGA-GGGGCTGCAGGGCGGC-TCTGAAGTGTGGTGGGCTTCCCTCCCTCCTGCTGTAGGCGCTGC-GCAGTGTGGTTTCACGTCAGCGTCACTGCTGCCCTGAGGTCCTGGCTTGTCC----TC----AGGAACAGCAAGATCTGGCTGTCGGCAGGGCCTTTCCTAAGTTTCTCAAAATCCAGAGGCTGCACAGATTCAGACACCATAGTTTCTGCCTCGAATTCGGGGAAATTGGTTTGGCAGAAGAAACACTTAAAATGTAACTTTGCATTGTTCCTTTACAGCCTTTCCTCTTAGTTTCAGATGGGAGTAGAAGCTCTTAGTCACTGATTGATTTAGAGGG-GGTT i calJac3.chr4 C 0 I 721 e canFam3.chr1 56226451 371 + 122678785 I a score=562513.000000 s hg38.chr6_KB021644v2_alt 170304 194 + 185823 ttttgt---tttttgtttgttttCAAGACAGAAAATAACTTGTGGTTTCAGCCTAAGACTAGGCCTGGTAAAGAGTTTATGCTCATGACTTagaggcagagggaagggaagaagatggtgccaaggaaggagaaaggaagaggaaATCTTCCTGTAGATGAAAATGAAGAGAGGTCGGTGATCCTGTGAGTGGGCga s panTro4.chr6 170759704 194 + 172623881 TTTTGT---TTTCTGTTTGTTTTCAAGACAGAAAATAACTTGTGGTTTCAGCCTAAGACTAGGCCTGGTAAAGAGTTTATGCTCATGACTTAGAGGCAGAGGGAAGGGAAGAAGATGGTGCCAAGGAAGGAGAAAGGAAGAGGAAATCTTCCCGTAGATGAAAATGAAGAGAGGTCGGTGATCCTGTGAGTGGGTga i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172516273 194 + 174210431 TTTTGT---TTCCTGTTTGTTTTCAAGACAGAAAATAACTTGTGGTTTTAGCCTAAGACTAGGCCTGGTAAAGAGTTGATGCTCATGACTTAGAGGCAGAGGGAAGGGAAGAAGATGGTGTCAAGGAAGGAGAAAGGAAGAGGAAATCTTCCCGTAGATGAAAATGAAGAGAGTTCGGTGATCCTGTGAGTGGGCga i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156375424 196 + 157873769 TTTTGTTTGTTCCTGTTTG-TTTCAAGACAGAAAATAACTTGTGGTTCCAGCCTAAGACTAGGCCTAGTAAAGAGTTTATGCTCATGACTTagaggcagagggaagggaagaagattgtgtcaaggaaggagaaaggaagaggaaATCTTCCCATAGATGAAAATGAAGAGAGGTCGATGATCCTGTGAGTGGGCga i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168192075 194 + 169853907 TTTTGT---TTTCTGTATGTTTTCAAGACAGAAAATAACTTGTGGTTTCAGCCTAAGACTAGGCCTGGTAAAGAGTTTATGCTCATGACTTAGAGGCAGAGGGAAGGGAAGAAGATTGTGTCAAGGAAGGAGAAAGGAGGTGGAAATCTTCCCATAGATGGAAATGAAGAGAAGTCAGTGATCCTGTGAGTGGGCGA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169146079 194 - 170955103 TTTTGT---TTTCTGTATGTTTTCAAGACAGAAAATAACTTGTGGTTTCAGCCTAAGACTAGGCCTGGTAAAGAGTTTATGCTCATGACTTAGAGGCAGAGGGAAGGGAAGAAGATTGTGTCAAGGAAGGAGAAAGGAGGTGGAAATCTTCCCATAGATGGAAATGAAGAGAAGTCAGTGATCCTGTGAGTGGGCGA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163962376 194 + 165299245 ttttgt---tttctgtatgttttcaagacagaaaataactTGTGGTTTCAGCCTAAGACTAGGCCTGGTAAAGAGTTTATGCTCATGACTTagaggcagagggaagggaagaagattgtgtcaaggaaggagaaaggaggaggaaatctTCCCATAGATGGAAATGAAGAGAAGTCAGTGATCCTGTGAGTGGGTGA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96747863 194 + 98384682 TTTTGT---TTTCTGTATGTTTTCAAGACAGAAAATAACTTGTGGTTTCAGCCTAAGACTAGGCCTGGTAAAGAGTTTATGCTCATGACTTAGAGGCAGAGGGAAGGGAAGAAGATTGTGTCAAGGAAGGAGAAAGGAGGAGGAAATCTTCCCATAGATGAAAATGAAGAGAAGTCAGTGATCCTGTGAGTGGGCGA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169958257 188 + 171630274 TTTTGT---TTTTTGTTTGTTGT-AAAACAGAAAATCATGTGAGGTTTCAGTCTAAGAGGAGGCCTGGTAAGGAGCTGATGCTCATGCCTCAGAGGCAGAGGCAAGGGATGAAGA--ATGGTCAGGAAGGAGAAAGGGAGAGGAAATCCTCCCATAGA-GAAAATGAAGAG--GCCAGTGATCCTCTGAGTGCGCAa i calJac3.chr4 I 721 C 0 e canFam3.chr1 56226451 371 + 122678785 I a score=3034261.000000 s hg38.chr6_KB021644v2_alt 170498 1045 + 185823 ctggaaatttcttgagggcagggattatgtctaattcattttgcccccaaatagct-aaagaaataaccaaacagagtaagtgtccaatgaatatgtatt-aatgCAAACATTTATGAAATGAAGAAGGAAAGAAACAGGATATAGATGAACCCAGATTCATTAAAAAGTGTGTGATCCTGTAATGAGGCAGGTCCTGATAAAAACTGAATAACAAAGGAAAAAGTATTCCAACACCAAAGTAAAATCTGCAGTTAGAAGCTA----GGAACAGAAACAGGGCCAATGCTTAGCTG-CCTTCTTGGGCTTATCTTCTTTAGTGTAGATGGTTTG--GAGGTCTTGGACAGGTTCCTGGGAACCACAGTAATCTTGCACCAGCTCTCAC----ACGTGC-GATTTGCGAGGGGGTC--TGTGCCTGCACTGCTT-TTTAATTTCAAGCTCATATTTTTCAAAAGTATCTACTATTATTTATCTGGCTCTGTGTCTCTCCACTTTTT-TCAGAGCCTTTGCAGTGTTTATGTCTTAACATGTTTGAACAGTTTTTATCCATGTATTTGACACAGTGGCTGATG---CACCCTTCGTTTGATGCAGCAAACGTCA---------CAGTGTTCCAGACGTTTAAAAAGACGT-AAGGAATTTCAATCAGGGCATTGCTTTAATAGAAATCATACATGTAGTGATGTT--GAGGGATCAGAAGTTTGGGAAGA-ACGTGATTTCTCTCCGGAAAAGTCATCTCCGGAGTCCTAAGACCTGCAGTAT-AGCGTGGAGATAGG--GTCCAGGCTCTCAGT----GTCATTTTCGTTTCTCACCCCCTCAGCCCTTAGA-----------GAGCTGAGCCTGAGCAAGTCGGGAGGGGCTCTTTGGAAGGATTGGGAAACTTCAGTTTAAATAATCCTGTAATTAAATCATGACTCACTGCATGCCTACTGCATGCCTGGCAG-TACAGATGCATTCCACATCCAGTATCCGAGACACCCTCTCTGTGGGCACCTCACTCATTCCCCAGCAGTGGGGCCGGCCACCTGAGCAGCTGGCCTCCGGCAGGGC-CAGGACTGAAGAGATG s panTro4.chr6 170759898 1023 + 172623881 ctggaaatttcttgagggcagggattatgtctaattcattttgcccccagatagct-aaagaaataaccaaacagagtaagtgtccagtgaatatgtatt-aatgCAAACATTTATGAAATGAAGAAGGAAAGAAAC--GATATAGATGAACCCAGATTCATTAAAAAGTGTGTGATCCTGTAATGAGGCAGGTCCTGATAAAAACTGAATAACAAAGGAAAAAGTATTCCAACACCAAAGTAAAATCTGCAGTCAGAAGCTA----GGAAGAGAAACAGGGCCAATGCTTAGCTG-CCTTCTTGGGCTTATCTTCTTTAGTGTAGATGGTTT--------------------CCTGGGAACTGCAGTAATCTGGCACCAGCTCTCAC----ACGTGC-GATTTGCGAGGGGGTC--TGTGCCTGCACTGCTT-TTTAATTTCAAGCTCATATTTTTCAAAAGTATCTACTATTATTTATCTGGCTCTGTGTCTCTCCACTTTTT-TCAGAGCCTTTGCAGTGTTTATGTCTTAACATGTTTGAACAGTTTTTATCCATGTATTTGACACAGTGGCTGATG---CACCCTTCATTTGATGCAGCAAACGTCA-----------GTGTTCCAGACGTTTAAAAAGACGT-AAGGAATTTCAATCAGGGCATTGCTTTAATAGAAATCATACATGTAGTGATGTT--GAGGGATCAGAAGTTTGGGAAGA-ACGTGATTTCTCTCCGGAAAAGTCATCTCCGGAGTCCTGAGACCTGCAGTAT-AGCGTGGAGATAGG--GTCCAGGCTCTCAGT----GTCATTTTTGTTTCTCACCCCCTCAGCCCTTAGA-----------GAGCTGAGCCTGAGCAAGTGGGGAGAGGCTCTTTGGAAGGATTGGGAAACTTCAGTTTAAATAATCCTGTAATTAAATCATGACTCACTGCATGCCTACTGCATGCCTGGCAG-TACAGATGCATTCCCCATCCAGTACCCGAGACACCCTCTCTGTGGGCACCTCACTCATTCCCCAGCAGTGGGGCCGGCCACCTGAGCAGCTGGCCTCCGGCAGGGC-CAGGACTGAAGAGATG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172516467 1054 + 174210431 ctggaaatttcttgagggcagagattatgtctaattcattttCCCCCAAAATAGCT-AAAGAAATAACCAAACAGAGTAAGTGTCCAATGAATATGTATT-AATGCAAATATTTATGAAATGAAGAAGGAAAGAAACAGGATATAGATGAACCCAGATTCATTAAAAAGTGCGTGATCCTGTAATGAGGTAGGTCCTGATAAAAACTGAATAACAAAGGAAAAAGTATTCCAACACCAAAGTAAAATCTGCAATTAGAAGCTA----GGAAGAGAAACAGGGCCAATGCTTAGCTG-CCTTCTTGGGCTTATCTTCTTTAGTGTAGATGGTTTG--GAGGTCTTGGACAGGTTCCTGGGAACTACAGTAATCTGGCGCCACCTCTCAC----ATGTGC-GATTTGCGAGGGGGTC--TGTGCCTGCACTGCTT-TTTAATTTCAAGCTCATATTTTTCAAAAGTATCTACTATTATATATCTGGCTCTGTGTCTCTCCACTTTTT-TCAGAGCCTTTGCAGTGTTTACGTCTTAACGTGTTTGAAGAGTTTTTCTCCATGTATTTGACACAGTGGCTGATG---CACCCTTCATTTGATGCAGCCAACGTTAACCATGTCACAGTGTTCCAGACGTTTAAAAAGACGT-AAGGAATTTAAATCAGGGCATTGCTTTAACAGAAATCATACACGTAGTGATGTT--GAGGGATCAGAAGTTTGGGAAGA-ACGTGATTTCTCTCCGGAAAAGTCATCTCCGGAGTCCTGAGACCTGCAGCAC-AGCGTGGAGATAGG--GTCCAGGCTCTCAGT----GTCATTTTTGTTTCTTACCTCCTCAGCTCTTAGA-----------GAGCTGAGCCTGAGCAAGTGGGGAGGGGCTCTTTGGAAGGACTGGGAAACTTCAGTTTAAATAATCCTATAATTAAATCATGACTCACTGCACGTCTACTGCATGCCTGGCAG-TACAGATGCATTCCCCATCCAGTACCCGAGGGACCCTCTCTGTGGGCACCTCACTCATTCCCCAGCAGTGGGGCTGGCCACCTGAGCAGCTGGCCTCTGGCAGGAC-CAGGACTGAAGAGATG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156375620 1059 + 157873769 ctggaaatttcttgagggcagggattatgtctaattcattttcccccaaaatagct-aaagaaataaccaaacagagtaagtgtccaatgaatatgtatt-aatgCAAACATTTATGAAATGAAGAAGGAAAGAAACAGGATATAGATGAACCCAGATTCATTAAAAAGTGTGTGATCCTGTAATGAGGCAGGTCCTGATAAAAACTGAATAACAAAGGAAAAAGTATTCCAACACCAAAGTAAAATCTGCAATAAGAAGCTA----GGAAGAGAAACAGGGCCAACGCTTAGCTG-CCTTCTTGGGCTTATCTTCTT-----TAGATGATTTG--GAGGTCTTGGACAGGTTCCTGGGAACTACAGTAATCCGGCGCCAGCTCTCGC----ACGTGC-GATTTGCGAGGGGGTC--TGTGCCGGCACTGCTT-TTTAATTTCAAGCTCATATTTTTCAAAAGTATCTACTATTATTTATCTGGCTCTGTGTCTCTCCACTTTTT-TCAGAGCCTTTGCAGTGTTTACGTCTTAACGTGTTTGACGAGTTTTTGTCTATGTATTTGACACAGTGGCTGATG---CACCCTTCATTTGATGCAGCCAACGTTAACCACATCACAGTGTTCCAGACGTTTAAGAAGACAT-AGGGAATTTCAATCA-GGCATTGCTTTAATAGGAATCATACACGTAGTGATGCT--GAGGGATCAGAAGTTTGGGAAGA-ACGTGATTTCTCTCCGGAAAAGTCATCTCCGGAGTCCTGAGACCTGCCGCAC-AGTGTGGAGATAGG--GTCCAGGCTATCAGT----GTCATTTTCGTTTCTTACCTCCTCAGCCCTTAGAgagctgagcctgagctgagcctgagcAAGTGGGGAGGGGCTCTTTGGAAGGATTGGGAAACTTCAGTTTAAATAATCCTGTAATTAAATCGTGACTCACTGCATGCCTGCTGCACGCCTGGCAG-TACAGATGCATTCCCCATCCAGTACCCGAGACACCCTCTCTGTGGGCACCTCACTCATTCCCCAGCAGTGGGGCTGGCCACCTGAGCAGCTGGCCTCTGGCAGGGC-CAGGACTGAAGAGATG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168192269 1062 + 169853907 CAAGAaatttcttgagggcagggattatgcctaattcatttttccccaaaatagctaaaaaaaaaaaccaaacagagtaagtgttcactgaatatttatt-aaTGCAAACATTTATGAAATGAAGAAGGAAAGAAACAGGATATAGATGAACCCACATTCATTAAAAAGTGTGTGATCCTGTAATGAGGTAGGTCCTGATAAAAACTGAATAATAAAGG--AAAGTATCCCAACACCAAAGTAAAATCTGCAATTAGAAGCTA----GGAAGAGAAACCGGGCCAATGCTTAGCTG-CCTTCTTGCGCTTATCTTCTATAGTGTACATGGTTTG--GGGGTCTTGGACAGGTTCCTGGGAACCACAGTAATCTGGTGCCAGCTCTCAC----ACGTGC-AATTTGCAAGGGGGTC--TGTGCTTGCACTGCTT-CTTAATTTCAAGCTCATCTTTTTAAAAAATATCTACTATAACTTATCTGGCTCTGTGTCTCTCCACTTTTG-TCAGAGCGTTTGCAGCGTTTACGTCTTAACGTGTTTGAAGAGTTTTTATCCATGTATTGGACACAGTGGCTGATGCACCACCCTTCATTTGATGCAGCCAAAGTTAACCACATCACA--GTACCAGGCGTTTAAAAAGATGT-AAGAAATTTCAATCAGGACATTGCTTTAATACAAATCATATACGTAGTGATGTT--GAGGGATCAGAAGTTTGGGAAGA-ATGTGATTTCTCTCCGG--AAGTCATCTCCGCAGTCCTGAGACCTGCAGCAC-AGCGCCGAGACAGG--GTCCAGGCTCTCAGC----GTCATTTCCGTTTCTCACCTCCTCAGCCCTTAGAGAGCTGCGCCTGTGCTATGCCTAAGCAAGTAGGGAGGGGCTCTTTGGAAGGACTGGGAAACTTC-GTTTAAACAATCCTGTAATTAAATCATAACTTACTGCATGCCTACTGCATGCCTGGCGG-TACAGATGCATTCTCCATCCAGTACCCGAGACACCCTCTCTGTGGGCACCTCACTTGTTCCCCAGCAGTGGGGCTGGCCACCGGAGCAGCTGGCCCCCGGCAGGGC-CAGGACTGAAGAGATG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169146273 1063 - 170955103 CAAGAaatttcttgagggcagggattatgcctaattcatttttccccaaaatagct-aaaaaaaaaaccaaacagagtaagtgttcactgaatatttatt-aaTGCAAACATTTATGAAATGAAGAAGGAAAGAAACAGGATATAGATGAACCCACATTCATTAAAAAGTGTGTGATCCTGTAATGAGGTAGGTCCTGATAAAAACTGAATAATAAAGG--AAAGTATCCCAACACCAAAGTAAAATCTGCAATTAGAAGCTA----GGAAGAGAAACCGGGCCAATGCTTAGCTG-CCTTCTTGCGCTTATCTTCTATAGTGTACATGGTTTG--GGGGTCTTGGACAGGTTCCTGGGAACCACAGTAATCTGGTGCCAGCTCTCAC----ACGTGC-AATTTGCAAGGGGGTC--TGTGCTTGCACTGCTT-CTTAATTTCAAGCTCATCTTTTTAAAAAATATCTACTATAACTTATCTGGCTCTGTGTCTCTCCACTTTTG-TCAGAGCGTTTGCAGCGTTTACGTCTTAACGTGTTTGAAGAGTTTTTATCCATGTATTGGACACAGTGGCTGATGCACCACCCTTCATTTGATGCAGCCAAAGTTAACCACATCACAGTGTACCAGGCGTTTAAAAAGATGT-AAGAAATTTCAATCAGGACATTGCTTTAATACAAATCATATACGTAGTGATGTT--GAGGGATCAGAAGTTTGGGAAGA-ATGTGATTTCTCTCCGG--AAGTCATCTCCGCAGTCCTGAGACCTGCAGCAC-AGCGCCGAGACAGG--GTCCAGGCTCTCAGC----GTCATTTCCGTTTCTCACCTCCTCAGCCCTTAGAGAGCTGTGCCTGTGCTATGCCTAAGCAAGTAGGGAGGGGCTCTTTGGAAGGACTGGGAAACTTC-GTTTAAACAATCCTGTAATTAAATCATAACTTACTGCATGCCTACTGCATGCCTGGCGG-TACAGATGCATTCTCCATCCAGTACCCGAGACACCCTCTCTGTGGGCACCTCACTTGTTCCCCAGCAGTGGGGCTGGCCACCGGAGCAGCTGGCCCCCGGCAGGGC-CAGGACTGAAGAGATG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163962570 1065 + 165299245 CAGGAAATTTCTTGAGGGCAGTGATTATGTCTAATTCATTTTCCCCCCAAATAGCT-AAAGAAATAACCAAACAGAGAAAGTGTTCACTGAATATTTATT-AATGcaaacatttatgaaatgaagaaggaaagaaacaggatATAGATGAACCCACATTCATTAAAAAGTGTGTGATCCTGTAATGAGGTAGGTCCtgataaaaactgaataataaagG--AAAGTATCCCAACACCAAAGTAAAATCTGCAATTAGAAGCTA----GGAAGAGAAACCGGGCCAATGCTTAGCTG-CCTTCTTGTGCTTATCTTCTATAGTGTACATGGTTTG--GGGGTCTTGGACAGGTTCCTGGGAACTACAGTAATCTGGCGCCAGCTCTCAC----ACGTGC-AATTTGCAAGGGGGTC--TGTGCTTGCGCTGCTT-TTTAATTTCAagctcatcttttaaaaaaatatctactATTATTTATCCGGCTCTGTGTCTCTCCACTTTTG-TCAGAGCGTTTGCAGCGTTTACGTCTTAACGTGTTTGAAGAGTTTTTATCCATGTATTCGACACAGTGGCTGATGCACCACCCTTCATTTGATGCAGCCAAGGTTAACCACGTCACAGTGTACCAGGCGTTTAAAAAGATGT-AAGGAATTTCAATCAGGACATTGCTTTAATACAAATCATATACGTAGTGATGTT--GAGGGATCAGAAGTTTGGGAAGA-ATGTGATTTCTCTCCGGAAAAGTCATCTCCGCAGTCCTGAGACCTGCAGCAC-AGCGCGGAGACAGG--GTCCAGGCTCTCAGC----GTCATTTCCGTTTCTCACCTCCTCAGCCCTTAGAGAGATGCGCCTGTGCTGTGCCTGAGCAAGAGGGGAGGGGTTCTTTGGAAGGACTGGGAAACTTC-GTTTAAACAATCCTGTAATTAAATCATAACTTACTGCATGCCTACTGCATGCCTGGCGG-CACAGATGCATTCTCCATCCAGTACCCGAGACACCCTCTCTGTGGGCACCTCACTTGTTCCCCAGCAGTGGGGCTGGCCACCAGAGCAGCTGGCCCCCAGCAGGGC-CAGGACTGAAGAGATG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96748057 1053 + 98384682 CAAGAAATTTCTTGAGGGCAGGGATTATGCCTAATTCATTTCCCCCC-AAATAGCT-AAAGAAATAACCAAACAGAGTAAGTATTCACTGAATATTTATT-AATGCAAACATTTATGAAATGAAGAAGGAAAGAAATAGGATATAGATGAACCCACATTCATTAAAAAGTGTGCGATCCTTTAATGAGGTAGGTCCTGATAAAAACTGAATAACAAAGG--AAAGTATTCCAACACCAAAGTAGAATCTGCAATTAGAAGCTA----GGAAGAGAAACTGGGCCAATGGTTAGATG-CCTTCTTGCGCTTATCTTCTATAGTGTACATGGTTTG--GGGGTCTTGGACAGGTTCCTGGGAACTACAGTAATCTGGTGCCAGCTCTCAC----ACGTGC-AATTTGCAAGGGGGTC--TGTGCTTGCGCTGCTT-TTTAATTTCAAGCTCATCTTTTAAAAAAATATCTACTATTATTTATCTGGCTCTGTGTCTCTCCACTTTTG-TCAGAGCGTTTGCAGCGTTTACGTCTTAACGTGTTTGAAGAGTTTTTATCCATGTATTCGACACAGTGGCTGATGCACCACCCTTCATTTGATGCAGCCAAGGTTAACCACGTCACAGTGTACCAGGCGTTTAAAAAGATGT-AAGGAATTTCAATCAGGACATTGCTTTAATACAAATCATATACGTAGTGATGTT--GAGGGATCAGAAGTTTGGGAAGA-ATGTGATTTCTCTCCGGAAAAGTCATCTCCGCAGTCCTGAGACCTGCAGCAC-AGCGCAGAGACAGG--GTCCAGGCTCTCAGC----GTCATTTCCGTTTCTCACCTCCTCAGCCCTTAGAGAGCTGCGCCTGTGCTGTGCCTAAGCAAGTGGGGAGGGGCTCTTTGTAAGGACTGGGAAACTTC-GTTTAAACAATCCTGTAATTAAATGATAACT-----------CACTGCATGCCTGGCGG-TACAGATGCATTCTCCATCCAGTACCCGAGACACCCTCTCTGTGGGCACATCACTTGTTCCCCAGCAGTGGGGCTGGCCACTGGAGCAGCTGGCCCCAGGCAGGGC-CAGGACTGAAGAGATG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169958445 1000 + 171630274 ctgggaatttcctgagggcagggattatgtctaattcatttcccccacaaatagct-aaagaaataaagaaacagagtaagtgttcaatgaatatttatt-aatgCAAACATTTATGAAATGAAGAAGGAAAGAAACAGGATACAGATTAATCCAGACTCGTTAAGAAATGTGTGATCCTGTAATGAGGTCGGTCCTGATACAAACTGAATAACACAGG--AAAGTGTTGCAAAACCGAAGTGAAACCTGCAATCACGAGGTG----AGGAGAGAAACAGGGCC-ACACCTCGCGG-GCTCCTTGGGCTCATCCTCTTTGGAGAACC---TTTGCTGAGGTCCTGGACAGGTTGGCAGGAACCACGGTCATCCGGCGCCCCCAATCAC----ACGTG--GGTTTGCAAGGGGGTT--TCTGCTTG-ACTGCTT-TTTAATTTCAAGCTCCTAGTTTTCAAAAGTATCTACTCTTATTTATCTGG-TCTGTGTCTCTCCACTTTTG-TCAGAGTGTTTGTGGTGTTTGCGTCTTCTCATGTGTGAAGAGTTTATATCCGTTTATCCAACACAGTGGCTGATG---CACCCTTCATTTGATTCGGCCAATGTTAACCAT------GTGTTCCAGA--------------------AGTTTCAGTCAGGACATTGCTGTAGTAGAAATCATACACGTGGTGATTCT--GAGGGATGGGAAGTTTGGGAAGA-ACATGATTCCTCTCTGGAAAAGTCATCTCTGGAATCCTGAGACCTGCAGCGC-AGGA--GAGACAGG--GCCCAGGCTGTGAGT----GACATTTCTGCTTCTCACCCCC-CAGCTCTCAGTGAGCTGTGCCTGTGCTGAGGCTGAGCATGTGGGGAGGGGCTCT----------TGGGAAACGTCAGTTTAAGTAATCCTGTGATTCAGTCTCGACTCACTGAATGCCTACCGCGTG-CTGGCA--CACAGACACATTCTCCATCCAGTGCCT-----------------GGCATCTTGCCCA-GCCCCAGCAGTGGAGCT-GCCACCTGAGCGGCTGGCCTCCGGCAGGACGCAGGCCTGAAGAGATG i calJac3.chr4 C 0 I 46 s canFam3.chr1 56226822 982 + 122678785 ctggaaatttcttaagggcagggtttatgtctaatttatttttgtttttaatatct-aaagcaataaccagacatagcaagtgttcaatgaatatttagtaaatgCAAA-ATCTGTGGAATAGAGAAGGAAAGAAAT--GATCCAGATTAACCCAGATTAAGTGAGGAGTGTGAGATCCTGC-ATGGGGAACATGATGATAGAAATTCAATAGAAAAGG--AAATTATTTCAAGACCAAGGTGAAGCATATAACTAATAACTAATAGGTAAGAGAAACAGGGTCAATGCCAAATTGTTTTTCTTAGACTTAATTTC---AGTGATCA---------GTGGTCTGGGCCAGGACCGTGTGCGCCGTGTCCATGTGATGCCTGGCCCCACGAATATGTGAGGGCTCACACAGGAGTCCATCTACACGCACAGATTCCTTCACTTGAAGCCCAAATCTTTC-AAATTATCTGCCTTTATTTTTTTAGATCTATATTCTTCCATTTTTTCTCAGAGTATTTTTTATGTTTACA--TTAACATATGTATA---TCTTTATCCATG-GTTTTATTCACTGATTGAAA---TATTCTT-ATTTGATGTGACTAACAATG--------CCAGTGTTCCAGACGTCTTAAAAGATGTGAAAAGATTGCAACCAGGATAGTCCTGTAGCAGAAATAACAGAGATAGTGATTTTTCTGGGATTCAGAAGTGCAGAAAAAGATGTGTTTTCTACTTGGAAATCTCATCTCCAGAATCCT-AGAACTGCTGTGTAAATTTAGAAGCAAAATGTCTAAGTTGTAGGTGGGGGTCACTTACATTTCCCATCTGCTCATCCTTGGAAGTGGTGAGTCTCAGCTGTGGCCGGGAGAACCCACCCGGGTTCTCTGGAGGGCCAGGG--GCTCCGGC---ATTAGCCCAGC----------------------------CGGCTTACCTGTCAGCTGCTGCTGC---------CCCGTGCCTGTGGGGTCC--------GGCGCGTCCCCT----TCCTGTAG--------GCCAT----GCAGCTGGCTCAGGACA-GAC-CAGTGC---------- i canFam3.chr1 I 371 C 0 a score=59331.000000 s hg38.chr6_KB021644v2_alt 171543 21 + 185823 TCTGAAGTTAAATGCTGGAAG s panTro4.chr6 170760921 21 + 172623881 TCTGAGGTTAAATGCTGGAAG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172517521 21 + 174210431 TCTGAAGTTAAATGCTAGAAA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156376679 21 + 157873769 TCTGAAATTAAATGCTGGAAA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168193331 21 + 169853907 TCTAAAGTTAAATGCTGGAAG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169147336 21 - 170955103 TCTAAAGTTAAATGCTGGAAG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163963635 21 + 165299245 TCTAAAGTTAAATGCTGGAAG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96749110 21 + 98384682 TCTAAAGTTAAATGCTGGAAG i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56227804 17 + 122678785 ----AAGTTAAATGCTGGAGG i canFam3.chr1 C 0 I 38 e calJac3.chr4 169959445 46 + 171630274 I a score=321616.000000 s hg38.chr6_KB021644v2_alt 171564 97 + 185823 GTCCAATTTGCTCAAATC-ATTGAAAGAACTTAACACGGATGTCTACCAGATTGCAACAATGTTGGTTACTACAGTACAGTGACTTATTTAAGATAAA s panTro4.chr6 170760942 97 + 172623881 GTCCAATTTGCTCAAATT-ATTGAAAGAACTTAACACGGATGTCTACCAGATTGCAACAATGTTGGTTACTACAATACAGTGACTTATTTAAGATAAA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172517542 92 + 174210431 GTCCAATTTGCTAAAATC-ATTAAAAG-----AACATGGATGTCTACCAGATTGCAACAGTGTTGGTTACTACAATACAGTGACTTATTTAAGATAAA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156376700 97 + 157873769 GTCCAATTTGCTAAAATC-ATCAAAAGAACTTAACACGGATGTCTACCAGATTGCAACAGTGTTGGTTACTATAATACAGTGACTTTTTTAAGATAAA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168193352 97 + 169853907 GTCCAATTTGCTAAAATC-ACTGAAAGAACTTAACACAGATGTCTACCAGATTGCAACAGTGTTGGTTACTACAATACAGTGACTTATTCAAGATAAA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169147357 97 - 170955103 GTCCAATTTGCTAAAATC-ACTGAAAGAACTTAACACAGATGTCTACCAGATTGCAACAGTGTTGGTTACTACAATACAGTGACTTATTCAAGATAAA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163963656 97 + 165299245 GTCCAATTTGCTAAAATC-ACTGAAAGAACTTAACACAGATGTCTACCAGATTGCAACAGTGTTGGTTACTACAATACAGTGACTTATTCAAGATAAA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96749131 97 + 98384682 GTCCAATTTGCTAAAATC-ACTGAAAGAACTTAACACAGATGTCTACCAGATTGCAACAGTGTTGGTTACTACAATACAGTGACTTATTTAAGATAAA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169959491 97 + 171630274 GTCCAGCTTGCTAAAATC-ATTGAAAGAACTTCACCACGACGTCCACCAGATTGCAGCAATGTTGGTTACTACGATATAGCCACTGATTTAAGATAAA i calJac3.chr4 I 46 C 0 s canFam3.chr1 56227859 97 + 122678785 GTCAGACTTGCTAAAATCTTTTGAAAGGACCTAG-ACAGATGTCCACCGAATCTCAAAAGTGTCAGTTACTATAGTTCAGTGACTTATGTAAGAAAAA i canFam3.chr1 I 38 I 80 a score=1429745.000000 s hg38.chr6_KB021644v2_alt 171661 572 + 185823 GTGGAgctgggcacggtggctcacgcctgtaatctcagcactttgggaggccgaggcaggtggatcacatgaggtcaggagttctagaccagcctgcccaacatggtgaaaccccgtctctactaaaaatacaaaaattacccaggcgtggaggcctgcgcctgtagtctcagctattggggaggctgaggcagaagaattgcttcaaaatgggaggcagaggttgcagtgagccgacgtcgcgccactgtgctccagcctgggcaacagagcaagactc--tctcaaaaac-----------------agaaacaaaaaagataaaa---TGGTACCTCAACATCT------------TGATAATAAGGCCGAACACTTCTTTACAAG--------TTTATTTATTCtttttttttttttttttttttttttttttACTTTAAGATgacagagcctggctttgtcgcccgggctagaatgcagtggcgcaatcacagctcactgtagcctcaacctcctggactcaagctatccacctgactccgcctcccaaagtgctgggattacaggcgtgacccactgcgcccggcCCACTTACTCTGAAAATA-TTTTT s panTro4.chr6 170761039 564 + 172623881 GTGGAActgggcatggtggctcacgcctgtaatctcagcactttgggaggccgaggcaggtggatcacatgaggtcaggagttctagaccagcctgcccaacatggtgaaaccccgtctctactaaaaatacaaaaattacccaggcgtggaggcgtgcgcctgtagtctcagctattggggaggctgaggcagaagaattgcttcaaaatgggaggcagaggttgcagtgagccaagattgcgccactgtgctccagcctgggcaacagagcaagactc--tctcaaaaacg--------------aaaaaaaaaaaaaagataaaa---TGGTACCTCAACATCT------------TGATAATAAGGCCGAACACTTCTTTACAAG--------TTTATTTATTCTttttttttttttttttt-----------actttaagatgacagagcctggctttgtcgcccaggctagaatgcagtggcgcgatcacagctcactgtagcctcaacctcctggactcaagctatccacccgcctcagcctcccaaagtgctgggattacaggcgtgacccactgcgcccggcCCACTTACTCTGAAAATA-TTTTT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172517634 554 + 174210431 GTGGAActgggcacggtggctcacgcctgtaatctcagcactttgggaggccgaggcaggtggatcacatgaggtcaggagttctagactagcctgcccaacatggtgaaaccccgtctctactaaaaatacaaaaattacccaggcgtgaaggcatgcgcctgtagtctcagctactggggaggctgaggcagaagaattgcttcaaaatgggaggcagaggttgcagtgagccaagattgcgccactgtgctccagcctgggcaacagagcaagactc--tttcaaaaacg--------------aaaaaaaaaaaaaagataaaa---TGGTACCTCAACATCT------------TGTTAATAAGGCTGAACACTTCTTTACGAG--------TTTATTTAttctttttttttt-------------------actttaagatgac--agtctggctttgtcgcccaggctagaatgcagtggcgcgatcacagctcactgtagcctcaacctcctggactcaagctatccacccgcctcagcctcccaaagtgctgggattacaggcgtgagccactgcacccggcCCACTTACTCTGAAAATA-TGTTT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156376797 548 + 157873769 GTAGAActgggcacggtggctcacgcctgtaatctcagcactttgggaggccgaggcaggtggatcacatgaggtcaggagttctagaccagcctgcccaacatggtgaaaccccgtctctactaaaaatacaaaaattaccaaggcgtggaggtgtgcgcctgtagtctgagctattggggaggctgaggcagaataattgcttctaaatgggaggcagaggttgcagtgagccaagattgcaccactgtgctccagcctgagcatcagagcaagacta--tgtcaaaaac-------------------aaaacaaaaacataaaaTGGTGGTACCTCAACATCT------------TGATAATAAGGCTGAACACTTCTTTACAAG--------TTTAtttattcttttt------------------------actttaagatgacagagtctggttttgtcgcccaggctagaatgcagtggtgcaatcacagctcactgtagcctcaacctcctggactcaagctctccacccgcctcagcctcccagagtgctgggattacaggcgtgagccactgctcccggcCCACTTACTCTGAAAATA-T-TTT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168193449 568 + 169853907 GTGGAActgggcatggtggctcacgcctgtaatcccagcactttgggagatcaaggcagatggatcacatgaggtcaggagttctagaccagcctgcccaacatggtgaaaccctgtctctactaaaaatacaaaaattacccaagcattgatgcatgcacctgtagtctcagctactggggaggctgaggcagacgaattgcttcaaaatgggaggtggaggtcgcagtgagccaagattgcaccaatatgctccagcctgggcaacagagccagattctgtctcaaaaatg-----------aaaaaaaaaaaaaaaaagataaaA---TCGTACCTCAACATCTTTGAGACTTTAGTGATAATGAGACTGAACATTTCTTTACAAG--------------------tttatttatttatttatttatt------gctttaagatgtcagagtctggtgttgtcgcccaggctagaatgcagtggtgcgatcacagctcactgtagcctcaacctc-----ctcaagctatccacccacctcagcctcccaaagtgctgggattacaggcatgagtcactgcgcccggcctacttactctgaaaata-t-ttt i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169147454 589 - 170955103 GTGGAActgggcatggtggctcacgcctgtaatcccagcactttgggagatcaaggcagatggatcacatgaggtcaggagttctagaccagcctgcccaacatggtgaaaccctgtctctactaaaaatacaaaaattacccaagcatggaggcatgcacctgtagtctcagctactggggaggctgaggcagaagaattgcttcaaaatggtaggtggaggtcgcagtgagccaagattgcatcaatatgctccagcctgggcaacagagccagattctgtctcaaaaatg----------aaaaaaaaaaaaaaaaaagataaaa---TCGTACCTCAACATCTTTGAGACTTTAGTGATAATGAGACTGAACATTTCTTTACAAGtttatttatttatttatttatttatttatttatttatttatt------GCtttaagatgtcagagtctggtgttgtcgcccaggctagaatgcagtggtgcgatcacagctcactgtagcctcaacctc-----ctcaagctatccacccacctcagcctcccaaagtgctgggattacaggcatgagtcactgcgcccggcctacttactctgaaaata-t-ttt i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163963753 582 + 165299245 Gtggaactgggcatggtggctcacgcctgtaatctcagcactttgggagaccgaggcaggtggatcacatgaggtcaggagttctagaccagcctgcccaacatggtgaaaccctgtctctactaaaaatacaaaaattacccaggtatggacatatgcacctgtagtctcagctactggggaggctgaggcagaagaattgcttcaaaatgggaggcggaggtcgcagtgagccaagattgtaccaatatgctccagcctgggcaacagagccagattttgtctcaaaaacgaaaaaaaaaaaaaaaaaaaaaaaaaaaagataaaa---tcatacCTCAACATCTTTGAGACTTTAGTGATACTGAGACTGAACATTTCTttaccag--------tttatttatttatttatttatttatttatttatt------gctttaagaTGTCAGAGTCTGgcgttgtcgcccaggctagaatgcagtggc---------gctcactgtagcctcaatatc-----ctcaagctatccacccacctcagcctcccacagtgctgggattacaggcatgagccactgcgcccggcctacttactctgaaaata-t-ttt i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96749228 586 + 98384682 GTGGAActgggcatggtggctcacgcctgtaatcccagcactttgggagaccgaggcaggtggatcacacgaggtcaggagttctagaccagcctgcccaacatggtgaaaccctgtctctactaaaaatacaaaaattacccaggcatggaagcaagcacccgtagtctcagctactggggaggctgaggcagaagaattgcttcaaaatgggaggtggaggtcgcagcgagccaagattgcaccagtgtgctccagcctggacaacagagccagattctgtctcaaaaacg-----------aaaaaaaaaaaaaaaaagataaaA---TCATACCTCAACATCTTTGAGACTTTAGTGATGATGAGACTGAACATTTCTTTATAAG---Ttttatttatttatttacttattttttcatttatttatt------GCtttgagatgtgagagtctggcgttgtcacccaggctagaatgcagtggcgcgatcacagctcactgtagtctcaacctc-----ctcgagctgttcacccacctcagcctcgcaaagtgctgggattacaggcgtgagccactgcgcccggcCTACTTACTCTGAAAATATT-TTT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169959588 495 + 171630274 ATGGAAcctggcgtggtggctcacgcctgtaatcccagcgctttttgaggctgaggcaggtggatcacctgaggtcaggagttctagaccagcttgcccaacacagtgaaatcccgtctctactaaaaatacaaaaactagctgggcgtggtggtgtgcacctgtagtcgcggttactcaggaggctgaggcaggagaatttcttgaacctgggatgtggaggttgcagtgagccgagatcacaccactgcactccagcctggg----------------------------------------------------------ATAAAA---TGGTACCTCGACATCTTTAAGACTTTAATGATAATAAGGCAGAACAttttt-------------------------------------------------------tttttaagttgacagagtctgtctttgttgcccaggt--gaatgcagaggcacgatcacagctcgctgtagccccaacctgctgggctcaaaccagccatccgcctcagcttcccaaagtgctgggatgacaggagtgagccactgcgcccagcCTGCTTATTCTAAAAATA-C-TTT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56227956 80 + 122678785 I a score=120206.000000 s hg38.chr6_KB021644v2_alt 172233 36 + 185823 TTGCTTACATTAATTTCCTCTTTAAAAACTCAGGTT s panTro4.chr6 170761603 36 + 172623881 TTGCTTACATTAATTTCCTCTTTAAAAACTCAGGTT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172518188 36 + 174210431 TTGCTTACATTCATTTCCTCTTTAAAAACTCAGGTT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156377345 36 + 157873769 TTGCTTACATTCATTTCCTCTTTAAAAACTCAGGTT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168194017 36 + 169853907 ttgCTTACATTCATTTCCTCTTTAAAAACTCAAGTT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169148043 36 - 170955103 ttgCTTACATTCATTTCCTCTTTAAAAACTCAAGTT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163964335 36 + 165299245 ttgcttaCATTCGTTTCCTCTTTAAAAACTCAAGTT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96749814 36 + 98384682 TTGCTTATATTCATTTCCTCTTTAAAAACTCAAGTT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169960083 34 + 171630274 TTGTTTACATTAATTTCCTC--TAAAAAGTCTGGTT i calJac3.chr4 C 0 C 0 s canFam3.chr1 56228036 36 + 122678785 TTACTTATATTAGTTTCCCCTTTAAAACCTAAGACT i canFam3.chr1 I 80 I 1441 a score=654546.000000 s hg38.chr6_KB021644v2_alt 172269 232 + 185823 AGCAAGGAAATTAAGGATtctgcatttttacaagtgctccaggtaattctg-------atTCTCAGTTCCGAATTAAGATCTTCTGGATTGCAGTAAAAGGAAACATCTGTTCAGAACATAAGAAATGCTTctctaaggtagactttgttacttcctttttgcacacaggaaaattgaagctcagtaataaactaagttgtctgatgcacagttagtcagtggcagggctgtgctttac s panTro4.chr6 170761639 232 + 172623881 TGCAAGGAAATTAAGGATtctgcatttttacaagtgctccaggtaattctg-------atTCTCAGTTCCGAATTAAGATCTTCTGGATTGCAGTAAAAGGAAACATCTGTTCAGAACATAAGAAATGCTTctctaaggtagactttgttacttcctttttgcacacaggaaaattgaagctcagtaataaactaagttgtctgatgcacagttagtcggtggcagggctgtgctttac i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172518224 227 + 174210431 TGTAAGGAAATTAAGGATtctgcatttttacaagtgctccaggtaattctg-------atTCTCAGTTCCGAATTAAGATCTTCTGGATTACAGTAAAATGAAACA-CTGTTCAGAACATAAGAAATGCTTCTCTAaggtgggcttcgttatctcctttttgcacacaggaaaattgaagctcagtattaaactaagttgtccgatgcgtagtta----gtggcaaggctgtgctttac i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156377381 232 + 157873769 TGTAAGGAAATTAAAGATtctgcatttttacaagtgctccaggtaattctg-------atTCTCAGTTCCGAATTAAGATCTTCTGGATTATAGTAAAATGAAACATCTGTTCAGAACATAAGAAATGCTTctctaaggtagactttgttatttcctttttgcacataggaaaattgaagctcagtattcaactaagttgtctgatgcgcagttagtcagtggcagggctgtgctttac i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168194053 237 + 169853907 TGTAAGGAAGTTAAGGATtctgcatttttacaagtgctccaggtaattctgaggcC--ATTCTGAGTTCCGAATTAAGATTTTCTGGATTATAGTAAAATGAGACATCTGTTCAGAACATAAGAAATGCTTCTCTAAATtagactttgttatttcctttttgcacataggaaaactgaagctcagtattaaaccaagttgtcagatgcgcagttaatcagtggcagggctatgctttat i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169148079 237 - 170955103 TGTAAGGAAGTTAAGGATtctgcatttttacaagtgctccaggtaattctgatgcC--ATTCTGAGTTCCGAATTAAGATTTTCTGGATTATAGTAAAATGAGACATCTGTTCAGAACATAAGAAATGCTTCTCTAAATtagacgttgttatttcctttttgcacataggaaaactgaagctcagtattaaaccaagttgtcagatgcgcagttaatcagtggcagggctatgctttat i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163964371 239 + 165299245 TGTAAGGAAGTTAAGGATTCTGCATTTTTACAAGTGCTCCAGGTAACTCTGATGCCATATTCTGAGTTCCGAATTAAGATTTTCTGGATTATAGTAAAATGAAACATCTGTTCAGAACATAAGAAATGCTTCTCTGAATTAGACgttgttatttcctttttgcacataggaaaactgaagctcagtaTTAAACCAagttgtcagatgcacagtttatCAGTGGCAGGGCTATGCTTTAt i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96749850 237 + 98384682 TATAAGGAAGTTAAGGATtctgcatttttacaagtgctccaggtaattctgatgcC--ATTCTGAGTTCCGAATTAAGATTTTCTGGATTATAGTAAAATGAAACATCTGTTCAGAACATAAGAAATGCTTCTCTAagttagacgttgttatttcctttttgcacataggaaaactgaagctcagtattaaaccaagttgtcagatgcgcagttaatcagtggcagggctatgctttat i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169960117 236 + 171630274 TGTAAGGAAATTAAAGATtcttcatttttacaagtgctccaggtaattctgatgcC--ATTCTTAGTTCTGAATTAATATTTTCTGGATGATAGTAAAATGAAACATCTGTACCAAATCTAAGAAATGCCTCTCTAGCTtagggtttgtgatttcctttttgcacacaggagaattgaaaccgagta-taaaccaagttgtccgacgctcaggtattcagtgtcggggctacgctttac i calJac3.chr4 C 0 C 0 e canFam3.chr1 56228072 1441 + 122678785 I a score=5287601.000000 s hg38.chr6_KB021644v2_alt 172501 1803 + 185823 accaggtctgtctgactcaggagctgatattattcccaACATACACTAAATATTTTCTAAAAGAAAGCCCGTAACTTAAGATCCTTTGCATCCACTAAACAGAATATAAAGCCAAGCTTT----ATATTTTAAAAAG--------TCTGGATTTTAAAATAGATTATTTTATAAGCCAACTGGTTAAAAAGTTCTGATGTAACTGCA---------TGAAAATTCTAACATATCTTGTCATCTTATGATTCGATAATATCTGGTTTGTTGGAGGAAAAGAGAAAATCCATAATTGGCTGTTGAGAAACTCGAGATGGGACTTGTACTCATGAAAGCTGAGGATCAGGAGGGCTTATGCCCACAGCCGCTGGGCCCCAGGATGCTGGACACGTTCACCCATGACGCGGGAT------GGGTTCACTTCTTTGTTAATAAATCCATCACACGAA-------AACAGCTGTCTCAC---CTCCGCTGTAAGAGAGGGTCAGCAAAGGCGCAGCTGTGGGAGAGTGTCACAAACTAGTGTTCAGATGCCAGGGGCCCAAGACACA-GAGCCACATTTCACTCGGGTGTGATTTGCCCAGCGAAGAGTTAAACGTATGTTCCCTACTGAGAAACAGGAGGCTATTTCTCACTTGGTAAATGTCAACATGACCTGAGTGGA--CAGCATTATTCTCTCTCTCCTGTCCAGAGCTTGCAGAGAGTTT-GACCGTCCTCCAGAAGAGTTAAGTGACCTGGCATTAAAATGACCTTTTAT-AGGTTCAAGGCAAAATCAATCAATCCTGAGAAGCCATTCTAACCTCTCATCCTGCTGGTAGTTTTCCTTTCATTCTGAATTCCCATGTAACTGACAGAGTTACAGCAAAGGAGGTGGAGACCCAGCCATCAGTGGG-AGCCGTTCACT--------------------GCTGAGTGCCAGGGTCTTTGGCCAGCAGCTCTTCCTTGCCTGGTGCCCAGCTGCAGCTGGCAACATCTGTGACTGACCCTAGGGATCCTTGCC--TGGTG-CCTGG-TA--CAGCTGGCAGCCTCTGCGAGTGACCCTGAGGATGAAGCACCCAGCGGTGGTGAAGGAAGGTCTGTTAATGAGCAGAATGTGGAGAGACCAGCAGGAAGAGAAGCAGAGGT---GGCAACAACGCTTTCCACACTTTCTTGCCTCGTGGTCTCATTTTTCTCTCTGCCCTTTATCCCAGGAGAGTGTTCTCCACTATTTACAAATAAACTCGGGGCTCCTGTCCTTGTTTAGCTTTAACCAAAAGTCTTGGTGGATTCAGACTTTCACCCATTTCATTCAGGAGAAGCCCAAGA--TTTCATTAAAACTGGGGTTTTACAAACTTCCAGTGACAAAGCCTAAATCGTCATCAGTGCTGATGGGTTGGATCCT----------CTCATGGGGCGTCTGATC----CATGTTTACCAGGTGCCTGCTATGTCCTCTCCA-------CCAG-------GCGTGCAGCTCTGCAAAGAAGAAAAACCCGGCTCGTGCTGTCAGGGAGTGT-GGGAAAGCCATGGAAAAGTTCTCCTGAAAAGTAAACGCACGCAGCATTCGGAGACGACTATTAATAAATAAAACGCGTGAACTGCTTTTCATGTGTGAGGTGACTGTTGTCACTCATGTTGGTCCTCTGCAGTGCAGTC-CTAGCCTGTTTTGACCCCATTCCTATAAACACCGCAGGAAGGCACTACTTAGCTTGGTATTTGTGCCACTTAAACATGTTCCCGTTAAGCACATATTTGTGGTAATTGGGCATAATCCACTTAGTCTTGGTTTCTCATGAAAAATGTGTGGAAGGATTCTGTGCCCCAAGCCTTGATGGGTCATGCACAGTGGAATCGGAACTGTATCCA s panTro4.chr6 170761871 1793 + 172623881 accaggtctgtctgactcaggagctgatattattcccaACATACACTAAATATTTTCTAAAAGAAAGCCCGTAACT-AAGATCCTTTGCATCCACTAAACAGAATATAAAGCCAAGCTTT----ATATTTTAAAAAG--------TCTGGATTTTAAAATAGATTATTTTGTAAGCCAACTGGTTAAAAAGTTCTGATGTAACTGCA---------TGAAAATTCTAACATATCTTGTCATCTTATGATTCGATAATATCTGGTTTGTTGGAGGAAAAGAGAAAATCCATAATTGGCTGTTGAGAAACTCGAGATGGGACTTGTACTCATGAAAGCTGAGGATCAGGAGGGCTTATGCCCACAGCCGCTGGGCCCCAGGATGCTGGACACGTTCACCCGTGACGCGGGAT------GGGTTCACTTCTTTGTTAATAAATCCATCACACGAA-------AACAGCTGTCTCAC---CTCCGCTGTAAGAGAGGGTCAGCAAAGGCGCAGCTGTGGGAGAGTGTCACAAACTAGTGTTCAGACGCCAGGGGCCCAAGACACA-GAGCCACATTTCACTCGGGTGTGATTTGCCCAGTGAAGAGTTAAACGTGTGTTCCCTACTGAGAAACAGGAGGCTATTTCTCACTTGGTAAATGTCAACATGACCTGAGTGGA--CAGCATTATTCTCTCTCTCCTGTCCAGAGCTTGCAGAGAGTTT-GACCGTCCTCCAGAAGAGTTAAGTGACCTGGCATTAAAATGACCTTTTAT-AGGTTCAAGGCAAAATCAATCAATCCTGAGAAGCCATTCTAACCTCTCATCCTGCTGGTAGTTTTCCTTTCATTCTGAATTCCCATGTAACTGACAGAGTTACAGCAAAGGAGGTGGAGACCCAGCCGTCAGTGGG-AGCCGTTCACT--------------------GCTGAGTGCCAGGGTCTTTGGCCAGCAGCTCTTCCTTGCCTGGTGCCCAGCTGCAGCTGGCAACATCTGTGACTGACCCTAGGGATCCTTGCC--TGGTG-CCTGG-TA--CAGCTGGCAGCCTCTGCGAGTGACCCTGAGGATGAAGCACCCAGCGGTGGTGAAGGAAGGTCTGTTAATGAGCAGAATGTGGAGAGACCAGCAGGAAGAGAAGCAGAGGT---GGCAACAACGCTTTCCACACTTTCTTGCCTCGTGGTCTCATTTTTCTCTCTGCCCTTTATCCCAGGAGAGTGTTCTCCACTATTTACAACTAAACTCGGGGCTCCTGTCCTTGTTTAGCTTTAACCAAAAGTCTTGGTGGATTCAGACTTTCACCCATTTCATTCAGGAGAAGCCCAAGA--TTTCATTAAAACTGGGGTTTTACAAACTTCCAATGACAAAGCCTAAATCGTCATCAGTGCTGATGGGTTGGATCCT----------CTCATGGGGCGTCTGATC----CATGTTTACCGGGTGCCTGCTATGTCCTCTCCA-------CCAG-------GCCTGCAGTTCTGCAAAGAAGAAAAACCCGGCTCATGCTGTCAGGGAGTGT-GGGAAAGCCATGGAAAAGTTCTCCTGAAAAGTAAACGCACGCAGCATTCGGAGACGACTATTAATAAATAAAATGCGTGAGCTGCTTTTCATGTGTGAGGTGACTGTTGTCACTCATGTTGGTCCTCTGCA----------TAGCCTGTTTTGACCCCATTCCTATAAACACCGCAGGAAGGCACTACTTAGCTTGGTATTTGTGCCACTTAAACATGTTCCCGTTAAGCACATATTTGTGGTAATTGGGCATAATCCACTTAGTCTAGGTTTCTCATGAAAAATGTGTGGAAGGATTCTGTGCCCCAAGCCTTGATGGGTCATGCACAGTGGAATCGGAACTGTATCCA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172518451 1799 + 174210431 accaggtctgtctgactcaggagcTGAT-TTATTCCCAACATACACTAAATATTTTCTAAAAGAAAGCCAGTAACT-AAGATCCTTTGCATCCACTAAACAGAATATAAAGCCAAGCTTC----ATATTTTAAAAAG--------TCTGGGTTTTAAAATAGATTATTTTATAAGCCAACTGGTTAAAAAGTTCTGATGTAACTGCA---------TGAAAATTCTAACATATCTTGTCATCTTATGATTTGATAATATCTGGTTTGTTGGAGGAAAAGAGAAAATCCATAATTGGCTGTTGAGAAACTCGAGATGGGACTTGTACTCATTAAAGCTGAGGATCAGGAGGGTTTATGCCCACAGCCGCTGGGCCCCAGGATGCCGGACACGTTCACCCGTGACGCAGGAT------GAGTTCACTTCTTTGTTAATAAACCCGTCACACGAA-------AACTGCTGTCTCAC---CTCTGCTGTAAGAGAGGGTCGGCAAAGGCGCAGCTGTGGGAGAGTGTCACAAACTGGTTCACAGATGCCAGGGGCCCAAGACACA-GAGCCACATTTCACTCGGGTGTCATTTGCCCAGTGAAGAGTTAAATGTGTGTTCCCTACTGAGAAACAGGAGGCTATTTCTCACTTGGTAAATGTCAACATGACCTGAGTGGA--CAGTATTATTCTCACTCTCCTGTCCAGAGCTCGCAGAGAGTTT-GACCATTTTCCAGAAGAGTTAAGTGACCTGGCATTAAAATGACCTTTTAT-AGGTTCAAGGCAAAATCAATCAATCCTGAGAAGTCATTCTAACCTCTCATCCTGCTGGTAGTTCTCCTTTCATGCTGAATTCCCATGTAACTGACAAAGTTACAGCAAAGGAGGTAGAGACCCAGCTGTCAGTGGG-AGCCGTTCACT--------------------GCTAAGTGCCA--GTCTTTGGCCAGCAGTTCTTCCTTGCCTGGTGCCTGGCTGCAGCTAGTAACATCTGTGACTGACCCTAGGGATCCTTGCC--TGGTG-CCTGG-TA--CAGTCGGCAGCCTCTGTGAGTGACCCTGAGGATGAAGCACCCAGCAGTGATGAAGGAAGGTCTGTTAATGACCAGAATGTGGAGAGACCAGCAGGACGAGAAGCAGAGGT---GGCAACAATGCTTTCCACACTTTCTTGCCTCGTGGTCTCATTTTTCTCTCTGCCCTTTAACCCAGGAGAGTGTTCTCTACTATTTACAACTAAACTCGGGGCTCTTGGCCTTGTTTAGCTTTCACCAACAGTCTTGGCGGATTCAGGCTTTCACCCATTTCATTCAGGAGAAGCCCAAGA--TTTCATTAAAACTGGGGTTTTACAAACTTCCAATGACAGAGCCTAAATCATCGTCAGTGCTGATGGGTTGGATCCT----------CTCATGGGGCGTCTGATC----CATGTTTACTGGGTGCCTGCTATGTCCTCTCCA-------CCAG-------GCCTGCAGCTCTGCAAAGAAGAAAAACCTGGCTCATGCTGTCAGGGAGTGT-GGGAAAGCCATGGAAAAGTTCTCCTGAAAAGTAAACACACGCAGCTTTAGGAGACGACCATTAATAATTAAAATGCGTGAACTGCTTTTCATGTGTGAGCTGACTGCTGTCACTCATGTTGGTCCTCTGCAGTGCAGTC-CTAGCCTGTTTTGACCCCATTCCTATAAACACCGCAGGAAGGCACTATTTAGCTTGGTATTTGTGCCACTTAAACATGTTCCCGTTAAGCACATATTTGTGGTAATTGGGCATAATCCACTTAGTTTAGGTTTCTCATGAAAAACATGTGGAAGGATTCTGTGCCTCAAGCCTTGATGGGTCATGTGCAGTGGAATCAGAACTGTATCCA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156377613 1798 + 157873769 accaggtccgtctgactcaggagctgcttttgttcccaacatacgctAAATATTTTCTAAAAGAAAGCCAGTAACT-AAGATCCTTTGCATCCACTAAACAGGATATAAAACCAAGCTTT----ATATTTTAAAAAG--------TCTGGATTTTAAAATAGATTATTTTATAAGCCAACTGGTTAAAAAGTTCTGATGTAACTGCA---------TGAAAATTCTAACATATCTTGTCATCTTATGATTCGATAATATCTGGTTTGTTGGAGGAAAAGAGAAAATCCATAATTGGCTGTTGAGAAACTCGCGATGGGACTTGTACTCATTAAAGCTGAGGATCAGGAGGGCTTATGCCCACAGCTGCTGGGCCCCAGGATGCCAGACACGTTCACACGTGACGCGGGAT------GGATTCACTTCTTTGTTAATAAACCCATCACACGAA-------AGCAGCTGTCTCAC---CTCTGCTGTAAGAGAGGGTTGGCAAAGGTGCAGCTGTGGGAGAGTGTCACAAGCTGATGCA-AGACACCAGGGGCCCAAGACACA-GAGCCACATTTCACTCGGGTGTGATCTGCCCAGTGAAGAGTTAAACGTGTGTTCCCTACTGAGAAACAGGAGGCTACTTCTCACTTGGTAAATGTCGACATGACCTGAGTGGA--CGGTATTATTCT--CTCTCCTGTCCAGATCTCGCAAAAAGTTT-GACCGTCCTCCAGAATAGTTAAGTGACCTGGCATTAAAATGACCTTTTAT-AGGTTCAAGGCAAAATCAATCAATCCTGAGAAGCCATTCTAACCTCTCATCCTGCTGGTAGTTTTCCTTTCATTCTAAATTCCCATGTGACTGACAGAGTTATAGCAAAGGAGGTGGAGACCCAGCCGTCAGTGGA-AGCCGTTCACT--------------------GCTGAGTGCCAGGGTCTTTGGCCAGCAGCTCTTCCTTGCCTGGTGCCCGGCTGCAGCTGGCAACCTCTGTGACTGACCCTAGGGATCCTTTCC--TGGTG-CCTCG-TA--CAGCCGGCAGCCTCTGTGAGTGACCCTGAGGATGAAGCACCCAGCAGTGGTGAAGGAAGGTCTGTTAATGAGCAGAATGTGGAGACACCAGCAGGAAGAGAAGCAGAGGT---GGCAACAACGCTTTCCACACGTTCTTGCCTCGTGGTCTCATTTTTCTCTCTGCCCTTTATCCCAGGAGAGTGTTCTCCACTATTTGCAACTAAACTCGGGGCTCCTGTCCTTGTTTAGCTTTGACCAACGGTCTTGGTGGATTCAGGCTTTCACCCATTTCATTCAGGAGAAACCCAAGA--TTTCATTAAAACTGGGGTTTTACAAACTTCCAATGACAGAGCCTAAATCATCATCAGTGCTGATGGGTTGGATCCT----------CTCATGGGGCATCTGATC----Cacatttactgggtgcctgctatgtcctctcca-------ccag-------gtgtgcagctc-gcaaagaagaaacacctagctcgtgctctcagggagTGT-GGGAAAGCCATGGAAAAGTTCTCCTGAAAAGTAAACACACGCAGCATTAGGAGACGACTATTAATAAATAAAATGCGTGAACTGCTTTTCGTGTGTGAGTTGACTGCTCTCACTCATGTTGGTCCTCTGCAGTGCAGTC-GTAGCCTGTTTTGACCCCATTCCTATAAACACCGCAGGAAGGCACTACTTAGCTTGGTATTTGTGCCACTTAAACATGTTCCTGTGAAGCACATATTTGTGGTAATTGGGCATAATCCACTTAGTCTAGGTTTCTCATGAAAAATGTGTGGAAGAATTCTGTGCCTCAAGCCTTCATGGGTCATGTGCAGTGGAATCAGAACTGTATCCA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168194290 1800 + 169853907 accaggtctgtctgactcaggagctggtattgctcccaACATACACTAAATATTTTCTAAAAGAAAGCCAGTA-----------TTTGCATCCACTAAATAGAATATAAAGCCAAGCTTT----ATATTTTTAAAAG--------TCTGGATTTTAAAATAGATTATTTCATAAGCCAACTGGTTAAAAAGTTCTGATGTAACTGCA---------TGAAAATTCTAACATATCCTGTCATCTTATGATTTGATGACATCTGGTTTGTTGGAGGAAAAGAGAAAATCCATAATTGGCTGTTGAGAAACTTGAGATGGGATTTGTAGTCATTAAAGCTGAGGATCAGGAGGGCTTATGCCCACAGCCAGTGGGCCCCAGGATGCTGGACACGTTCGCCCGTGATACGGGAT------GGGTTCACCTCTTTGTTAACAAACCCATCGCCCGAA-------AGCGGCTGTCTCAC---CTCCACTGTAAGAGAGGGTCGGCAAAGGCACAGCTATGGGAGAGTGTCACAAACTGGTGCACAGATGTCAGGGGTCCAAGACACA-GAGCCACATTTCACTCTGGTGTGATCTGCCCAGTGAGGAGTTAAACATGTGTTCCCTACCGAGAAACGGGAGGCTATTTCTCACTTGGTAAATGTCGACATGACCTGAGTGGA--CAGCATTATTCTCACTCTCCTGTCCAGAGCTCGCAGAGAGTTT-GATCATCCTCCAGGAGAGTTAAGTGACCTGGCATTAAAACGACCTTTTAT-GGGTTCAAGGCAAAATCAATCAATCCTGAGATGCCATTCTAACCTCTCATCCTGCTGGTAGTT-TCCTTTCACTCTGAATT-CCATGTAACTGACAGAGTTACAGCAAAGGAGGTGGAGACCCAGCCGTCAGTGGG-AGCCATTTGCT--------------------GCTGAATGCCAGGGTC-TAGGCCAGCAGCCCTTCCTTGCCTGGTGCCCGGCTGCAGCTGGCAACATCTGTGACTGACCCTAGGGATCCTTGCC--TGGTG-TCTGGCTA--CCGCTGGCAGCCTCTGTGAGTGACCCTGAGGATGAAGCACCCAACGGTGGTGAAGGAAGGTCTGTTAACGAGCAGAATGTGGAGAGACCAGCAGGAACAGAAGCAGAGGTGGCGGCAACAACGCTTTCCACACTTTCTTGCCTCGTGGTCTCATTTTTCCCTCCGCCCTTTATCCCAGGAGAGTGTTCTCCACTATTTACAACTAAACTCGGGGCTCCTGTCCTTGCTTAGCTTTGACCAGT-GTCTTGGAGGATTCAGGCTTTCACCCATTTCATTGAGGAGAAGCCCAAGA--TTTCATTAAAACTGGGGTTTTACAAACTTCCAATGACAGAGCCTAAATCATCATCAGTGCTGATGGCTTGGATCCTGGGCCATCAGCCCAGGGGGCGTCTGATC----CATGTTTACCGGGTGCCCGCTATGTCCTCTCCA-------CCAG-------GCATGCAGCTCTGCAAAGAAGAAA-ACCCGGCTCATGCTCTCAGGGAGTGT-GGGAAAGCCATGGAAAAGTTCTCCTGAAAAGTGAACACGCACAGCGTTAGGGGACGACTGTTAATAAATAAAATGCGTCAACTGCTTTTCATGTGTGCGTTGACTGCTGTCACCAAGGTTGGTCCTCTGCAGTGCAGTC-CCAGCCTGTTTTGACCCCATTCCTATAAACACCGCAGGAAGGCACTACTTAGCTTGGTATTTGTGTCACTTAAACATGTTCCCGTTAAGCACATATTTGTGGTAATTAGGTATAATCCCCTTAGTCTAGGTTTCTCATGAGAAATGTGTGGAAGAATTCTGTGCCTCAAGCGTTGATGGGTCAGACACAGT-GAATCAGAACTGTGTCCA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169148316 1800 - 170955103 accaggtctgtctgactcaggagctggtattgctcccaACATACACTAAATATTTTCTAAAAGAAAGCCAGTA-----------TTTGCATCCACTAAATAGAATATAAAGCCAAGCTTT----ATATTTTTAAAAG--------TCTGGATTTTAAAATAGATTATTTCATAAGCCAACTGGTTAAAAAGTTCTGATGTAACTGCA---------TGAAAATTCTAACATATCCTGTCATCTTATGATTTGATGACATCTGGTTTGTTGGAGGAAAAGAGAAAATCCATAATTGGCTGTTGAGAAACTTGAGATGGGATTTGTAGTCATTAAAGCTGAGGATCAGGAGGGCTTATGCCCACAGCCAGTGGGCCCCAGGATGCTGGACACGTTCGCCCGTGATACGGGAT------GGGTTCACCTCTTTGTTAACAAACCCATCGCCCGAA-------AGCGGCTGTCTCAC---CTCCACTGTAAGAGAGGGTCGGCAAAGGCACAGCTATGGGAGAGTGTCACAAACTGGTGCACAGATGCCAGGGGTCCAAGACACA-GAGCCACATTTCACTCTGGTGTGATCTGCCCAGTGAGGAGTTAAACATGTGTTCCCTACCGAGAAACAGGAGGCTATTTCTCACTTGGTAAATGTCGACATGACCTGAGTGGA--CAGCATTATTCTCACTCTCCTGTCCAGAGCTCGCAGAGAGTTT-GATCATCCTCCAGGAGAGTTAAGTGACCTGGCATTAAAACGACCTTTTAT-GGGTTCAAGGCAAAATCAATCAATCCTGAGATGCCATTCTAACCTCTCATCCTGCTGGTAGTT-TCCTTTCACTCTGAATT-CCATGTAACTGACAGAGTTACAGCAAAGGAGGTGGAGACCCAGCCGTCAGTGGG-AGCCATTTGCT--------------------GCTGAATGCCAGGGTC-TAGGCCAGCAGCCCTTCCTTGCCTGGTGCCCGGCTGCAGCTGGCAACATCTGTGACTGACCCTAGGGATCCTTGCC--TGGTG-TCTGGCTA--CCGCTGGCAGCCTCTGTGAGTGACCCTGAGGATGAAGCACCCAACGGTGGTGAAGGAAGGTCTGTTAACGAGCAGAATGTGGAGAGACCAGCAGGAACAGAAGCAGAGGTGGCGGCAACAACGCTTTCCACACTTTCTTGCCTGGTGGTCTCATTTTTCCCTCCGCCCTTTATCCCAGGAGAGTGTTCTCCACTATTTACAACTAAACTCGGGGCTCCTGTCCTTGCTTAGCTTTGACCAAC-GTCTTGGAGGATTCAGGCTTTCACCCATTTCATTGAGGAGAAGCCCAAGA--TTTCATTAAAACTGGGGTTTTACAAACTTCCAATGACAGAGCCTAAATCATCATCAGTGCTGATGGCTTGGATCCTGGGCCATCAGCCCAGGGGGCGTCTGATC----CATGTTTACCGGGTGCCCGCTATGTCCTCTCCA-------CCAG-------GCATGCAGCTCTGCAAAGAAGAAA-ACCCGGCTCATGCTCTCAGGGAGTGT-GGGAAAGCCATGGAAAAGTTCTCCTGAAAAGTGAACACGCACAGCGTTAGGGGACGACTGTTAATAAATAAAATGCGTCAACTGCTTTTCATGTGTGCGTTGACTGCTCTCACCAAGGTTGGTCCTCTGCAGTGCAGTC-CCAGCCTGTTTTGACCCCATTCCTATAAACACCGCAGGAAGGCACTACTTAGCTTGGTATTTGTGTCACTTAAACATGTTCCCGTTAAGCACATATTTGTGGTAATTAGGTATAATCCCCTTAGTCTAGGTTTCTCATGAAAAATGTGTGGAAGAATTCTGTGCCTCAAGCGTTGATGGGTCAGACACAGT-GAATCAGAACTGTGTCCA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163964610 1798 + 165299245 accaggtctgtctgactcagGAGCTGGTATTGCTCCCAACATacactaaatattttctaaaagaaagccAGTA-----------TTTGCATCCACTAAATAGAATATAAAGCCaagcttt----atgtttttaaaag--------tctggattttaaaatagattatttcatAAGCCAACTGGTTAAAAAGTTCTGATGTAACTgcatgaaaattctgaaaattctaaCATATCCTGTCATCTTATGATTCGATGATATCTGGTTTgttggaggaaaagagaaaatccatAATTGGCTGTTGAGAAACTTGAGATGGGATTTGTAGTCATTAAAGCTGAGGATCAGGAGGGCTTATGCCCACAGTCAGTGGGCCCCAGGATGCTGGACACGTTCGCCCGTGATATGGGAT------GGGTTCACTTCTTTGTTAACAAACCCGTCACCCAAA-------AGCGGCTGTCTCAC---CTCCACTGTAAGAGAGGGTCGGCAAAGGCACAGCTGTGGGAGAGTGTCACACACTGGTGCACAGATGCCAGGGGTCCAAGACACA-GAGCCACATTTCACTCTGGTGTGATCTGCCCAGTGAGGAGTTAAACGTGTGTTCCCTACCGAGAAACAGGAAGCTATTTCTCACTTGGTAAATGTCGACATGACCTGAGTGGA--CAGCGTTATTCTCACTCTCCTGCCCAGAGCTCGCAGAGAGTTT-GATCATCCTCCAGGAGAGTTAAGTGACCTGGCATTAAAATGACCTTTTAT-GGGTTCAAGGCAAAATCAATCAATCCTGAGATGCCCTTCTAACCTCTCATCCTGCTGGTAGTT-CCCTTTCACTCTGAATT-CCACGTAACTGACAGAGTTACA-CAAAGGAGGTGGAGACCCAG-CGTCAGTGGG-AGCCATTTGCT--------------------GCTGAATGCCAGGGTC-TAGGCCAGCAGCCCTTCCTTGCCTGGTGCCCGGCTGCAGCTGGCAACATCTGTGACTGACCCTAGGGATCCTTGCC--TGGTG-TCTGGCTA--CCGCTGGCAGCCTCTGTGAGTGACCCTGAGGATGAAGCACCCAACGGTGGTGAAGGAAGGTCTGTTAACGAGCAGAATGTGGAGAGACCAgcaggaagagaagcagaggtGGCGGCAACAACGCTTTCCACACTTTCTTGCCTCGTGGTCTCATTTTTCCCTCCGCCCTTTATCCCAGGAGAGTGTTCTCCACTATTTACAACTAAACTCGGGGCTCCCGTCCTTGCTTAGCTTTGACCAAC-GTCTTGGAGGATTCAGGCTTTCACCCATTTCATTGAGGAGAAGCCCAAGA--TTTCATTAAAACTGGGGTTTTACAAACTTCCAATGACAGAGCCTAAATCATCATCAGTGCTGATGGCTTGGATCCT----------CTCATGGGGCGTCTGATC----CATGTTTACCGGGTGCCCGCTATGTCCTCTCCA-------CCAG-------GCATGCAGCTCTGCAAAGAAGAAACACCCGGCTCATGCTCTCAGGGAGTGT-GGGAAAGCCATGGAAAAGTTCTCCTGAAAAGTGAACACGCACAGCGTTAGGGGACGActgttaataaataaaatgcGTCAACTGCTTTTCATGTGTGCGTTGACTGCTGTCACCAAGGTTGGTCCTCTGCAGTGCAGTC-CCAGCCTGTTTTGACCCCATTCCTATAAACACCGCAGGAAGGCACTATTTAGCTTGGTATTTGTGTCACTTAAACATGTTCCCATTAAGGACATATTTGTGGTAATTGGGTATAATCCCCTTAGTCTAGGTTTCTCATGAAAAATGTGTGGAAGAATTCTGTGCCTCAAGCGTTGATGGGTCAGACACAGT-GAATCAGAACTGTGTCCA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96750087 1787 + 98384682 accaggtctgtctcactcaggagctggtattgctcccaACATACACTAAATATTTTCTAACAGAAAGCCAGTA-----------TTTGCATCCACTAAATAGAATACAAAGCCAAGCTTT----ATATTTTTAAAAG--------TCTGGATTTTAAAATATATTATTTCATAAGCCAACTGGTTAAAAAGTTCTGATGTAACTGCA---------TGAAAATTCTAACATATCCTGTCATCTTATGATTCGATGATATCTGGTTTGTTGGAGGAAAAGAGAAAATCAATAATTGGCTGTTGAGAAACTTGA-----GATTTGTAGTCATTAAAGCTGAGGATCAGGAGGGCTTACGCCCACAGCCGCTGGGCCCCAGGATGCTGGACACGTTCGCTCATGATACGGGAT------GGGTTCACTTCTTTGTTAATAAACCCATCGCCCGAA-------AGTGGCTGTCTCAC---CTCCACTGTAAGAGAGGGTCGGCAAAGGCACAGCTGTGGGAGAGTGTCACACACTGGTGCACAGATGCCAGGGGTCCAAGACACA-GAGCCACATTTCACTCTGGTGTGATCTGCCCAGTGAGGAGTTAAACGTGTGTTCCCTACCGAGAAACAGGAGGCTATTTCTCACTTGGTGAATGTCGACATGACCTGAGTGGA--CAGCGTTATTCTCACTCTCCTGTCCAGAGCTCGCAGAGAGTTT-GATCATCCTCCAGGAGAGTTAAGTGACCTGGCATTAAAATGACCTCTTAT-GGGTTCAAGGCAAAATCAATCAATCCTGAGATGCCATTCTAACCTCTCATCCTGCTGGTAGTT-TCGTTTCACTCTGAATT-CCATGTAACTGACAGAGTTACAGCAAAGGAGGTGGAGACCCAGCCGTCAGTGGG-AGCCATTTGCT--------------------GCTGAATGCCAGGGTCTTTGGCCAGCAGCCCTTCCTTGCCTCGTGCCCGGCTGCAGCTGGCAACATCTGTGACTGACCCTAGGGATCCTTGCC--TGGTG-TCTGGCTA--CCGCTGGCAGCCTCTGTGAGTGACCCTGAGGATGAAGCACCCAACGGTGGTGAAGGAAGGTCTGTTAATGAGCAGAATGTGGAGAGACCAGCAGGAAGAGAAGCAGAGGTGGCGGCAACAACGCTTTCCACACTTTCTTGCCTCGTGGTCTCATTTTTCTCTCGGCCCTTTATCCCAGGAGAGTGTTCTCCACTATTTACAACTAAACTCCGGGCTCCTGTCCTTGCTTAGCTTTGACCAAC-GTCTTGGAGGATTCAGGCTTTCACCCATTTCATTGAGGAGAAGCCCAAGA--TTTCATTAAAACTGGGGTTTTACAAACTTCCAATGACAGAGCCTAAATCATCATCAGTGCTCATGGCTTGGATCCT----------CTCATGGGGCGTCTGATC----CATGTTTACTGGGTGCCCCCTATGTCCTCTCCA-------CCAG-------GCATGCAGCTCTGCAAAGAAGAAAAATCCGGCTCATGCTCTCAGGGAGTGT-GGGAAAGCCAGGGAAAAGTTCTCCTGAAAAGTAAACACGCACAGCGTTAGGGGACGACTGCTAATAAATAAAATGCATGAACTGCCTTTCATGTGTGCATTGACTGCTGTCACCAAGGTTGGTCCTCTGCAGTGCAGTC-CCAGCCTGTTTTGACCCCATTCCTATAAACAATGCAGGAAGGCACTACTTAGCTTGGTATTTGTGCCACTTAAACATGTTCCCCTTAAGCACATATTTGTGGTAATTGGGTATAATCCATTTAGTCTAGGTTTCTCATGAAAAATGTGTGGAAGAATTCTGTGCCTCAAGCGTTGATGGGTCAGGCACAGT-AAATCAGAACTGTGTCTA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169960353 1613 + 171630274 acccggcctgtctgactcaggggctgctattgttccc-acGTACGCTAAAGGTTTTCTAAAAGAAAGCCAGTA-CTTAGGGTCCTTTGCGTCCACTAAGTACAATATAAAGTCAAACTTCTGTATTCTTTTTGAAAG--------TCTGGATTTTAAAATAGATTATTTTATAAGCCAACCGGTTAAAAAGCTCTGATGTAACTGCA---------CGAAAATTCTAACATAGCCTGTAATTT--------------ACCTGGTTTGTTGGAGGAAAAGAGAAAATCCATAATTGGCTGTTGAGAAACTCGAGACAGGACTCATACTCGCTAAAGCTGGGGATCAGCAGGGCTTGTG-CCACAGCTGCCGGGCCCCG-----------------------GACGCAGGAT------GGGTTCACGTCCTTGTTAATAAACCAGTCACACGAA-------AACTGCTGTCTCAC---CTCCACTGTAAGAG-----------GTGCGCAGCTTGGGGAGGATGTCACAGATTAATGCGCAGGTGCCCGGCACCCACAACGGC-GAGCTCCATTTCACTCTGGTGTGATTTG--------------------------CCTACCAAGAAACAGGAGGCGATTTCTCCCTTGGCAAATGTTGAAATGACGTGCGTGGA--CGGCATTATCCTCACTCTCCTGTCCAGACCTCGCAGAGAGTCT-GATCGTTCTCCAGTAGAGTTAAGTGACCTGGCATTAAAATGACCTTTTGT-AGGTTCAAGGCAAAATCAACAA--------------------------ATCCTGCTGACAGTT-TTCTTTCATTCTGAACTCCCGTGTAACTGACAGAGTCACCTCAAAAGCAGCCGCGACCCAGCGGTCAGTGGG-AGCTGTTCACT--------------------GCCGAGTCCCAGGGTC-TCGGCCAGCAGGTCTTCCTTGCCTGGTGCCCAGCTGCAGCTGGTGACATC------------------------------------------------------CCTC----AGTGACTCTGAGTATGAAGTA------------GTAGGAAGCTCTGTTGACGAGCACAATGTGAGGAGACCAGCAGGAAGGGAAGCAGAGGT---GGCAACAAGGCTTTTCACACTTTCTCATCCTGTGGCCTTATTTTCCT-TCTGCCCTTTATCCTGGGAGAGTGTTTCCTGCAATTTACATCTAAGCTCGGGGCTCCTGTCCTTCTCCGGCTTTGACCAACAGTCTTCGTGGATTCAAGCTTTCACCCATTTCATTCAGGAGAAGCCCAGGA--TTTCATTAAAAATGGGGTTTTACAAACTTCCAACGCGAGACCCTACATCATCCTCAGTGCTGACAGGTTGAATCCT----------CTCACACGGCGTCTCATC----TGTGTTTACCGGGTGCCCGCTCCGTCCTCTCCACTTCGAGCTGG-------GCGTGCACCTTTGCAAAGAAGAAAAACCC-GCTCATGCGCTCAGGGAGCAT-GGGAAAGCCTTGGAAAA---CTTCTGAAAAGTGAACAC-CGCAGCCTCAGGAGATGCCTGTTAATAGATGAAACGCGTGAACTACTTCTCATGCGCTACCTGAC-GCTGTCACTCACGCTGGTCGTCGGCTATTCAGTC-CTAGCCTG-----------------TGAACACCACAGGAAGGCACTACTCAGCTTGGTGTTTGTGCCTCTTAAACATGTTCCCATTAAGCACATATTTGTGGTAATTGGGCGTAATCCACTTAGTCGA--------ATGAAAAATGCATGGAAGGATTCTGTGCCTCAAGCCTTGATGCGTCATGCACGGTGGAATCGGAGCTGCATTCA i calJac3.chr4 C 0 C 0 s canFam3.chr1 56229513 1711 + 122678785 ATCGGGTTCATCTGATTCGTGAGCAAGTATTCTTTCTACCAAG----AAATATTTCCTAAAGGAAAGCCAACAGCT-GAGATCCTTTACAACCACTAAATAAAATGGAATTTCAAACTTC-----TGTCTTAAAAAAAGAAAATTTCTGTGTTCTGAGATGGATTATTTCATAATCCATTCAACTATGAAATTCTGATATAATTGCT---------TGGAAATTTTTGCTTATCTTGTAATCCTATGACTCAGTAATATCTGGTTGGTTG--------GGGAAAGGTCACCA--GGCTGGTGAGAA--CCGAAGCCAGATTGATGCCAATTCTGGTGAGTGACTGG--------ATGTGCACATCCATGGTTCCATGCCATGCTGTGTA---GCACACGTGTCCTGGGGCATTTGGAAGCCCCCCTCCCTACTGATATATTAATCACACTCACATCATCAATGTTCATCACACACACTCGTCAGTACCATCAGAAGGACCAAGGAGAAATTC--GAAGATCGTTACAAATTTATGCCCAGATGCCAAGGGGCCAAGAGATGCAAGTGACATTTTACTGTGGTGAGCTCTGGAGAGTGAAGAGTTCACCATGTATTCCTTACCAAAAAGCAGGATGCTGGAT-TCACTTGAGTAAATTCAAAATGACTGAAATAAAGTCTGCGTTGTTC-CACTTTTTTGTTGGCAGTTTGTAAAGAGTCTGGATGGTTTTCCAGGAGA-TTACAAGATCTGGCACTGAGCCCACCTTTGATAAGGCCCAGAGCAAGATCAGTAAACCCTAAGAAGGGTTTCTTACCTCTTTTTAAGCTTGCAGTT-TCCTTTTACTCTAAATTCTCATAAAATTGAC--AGTTCCAGCAGAAGAGGTGGAGACACAACCATCAGCAGGCAGCTGTTTACTCTATGGTCTGGGGCTCACGGACCAAGGACAAGGGTGCAGGGCTGAAGAATCCTCCTTGTTTGGAGC----------------------------------AAGGACCATGTCCCGTGGTGACCTGGATAAGTGGCTGTGGGTGTGTGGGGATGACT-TGAGAACTAAATCCTCAGTGCCGGTAGAGCAAAGTCTGCT---------------GAGGGACCCTCAGGA--------------------------------------TGCTTCTATTATTGTCTCATTTGTC--TCTGCCCTTCATCCCAGAAGAGCACTGCCCATCACGTGCACACAAGCTCAGGGCTCATTGTGTTATCTGACTTGGTCCAA--ATCTTTGTGGATTCAAGCTTTCACCAGTTTCTTTCAAGAGAGGCCCCAAAATCTCCATTAAAAGTCAACTTGTACAGGCTTCAAATTACAAAGCTTAATTTGTGACACATTTTTATGAGGTAGCTCCT----------CTTACCCGGTGTTTGAGCAGCAAACATTTACTGAGTTCCTGCTACGTCCTCTCCT-------GCAGGAGCAGCGCATGC-TCTCTGTAAGGAAGGGAAACATGACTC-TGCTCTCCTGGAGTGTAAGGAGAGTCATGGGAAATTTCCCTTGAAAC-TAAACTTTTACACCATCAAGAGACGGCCTGCTATGCAT-AAATGTGTTGTCTATTCTTC-----------------TGTTACTCACATTGGGGATCTTGGATGCATTCTCTGACATAGGTTGATCCCATTAAAATAAGCAATGGAGGTA-GTACTACTTACTTTTGTATTTTTG-CATTTAAATATTTTCCCAGTAAAAATATATTTGTAGTAATCGAGTATAATCCAC-TAATCTAGTTTC-------------TATAGTAGGTTTCGGTAACTCAGGATTTGACTTATTCTAGAAAATATAATGAGAATTATATCCA i canFam3.chr1 I 1441 C 0 a score=18983.000000 s hg38.chr6_KB021644v2_alt 174304 7 + 185823 ATGCACC s panTro4.chr6 170763664 7 + 172623881 ATGCACC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172520250 7 + 174210431 ATGCACT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156379411 7 + 157873769 ATGCACC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168196090 7 + 169853907 ATGCACC i rheMac3.chr4 C 0 I 97 s macFas5.chr4 169150116 7 - 170955103 ATGCACC i macFas5.chr4 C 0 I 9 s papAnu2.chr4 163966408 7 + 165299245 ATGCACC i papAnu2.chr4 C 0 I 9 s chlSab2.chr13 96751874 7 + 98384682 GTGCACC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169961966 7 + 171630274 TTGCCCC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56231224 0 + 122678785 C a score=2643.000000 s hg38.chr6_KB021644v2_alt 174311 3 + 185823 CAC s panTro4.chr6 170763671 3 + 172623881 CAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172520257 3 + 174210431 CAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156379418 3 + 157873769 CAC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169150132 3 - 170955103 AAT i macFas5.chr4 I 9 C 0 s papAnu2.chr4 163966424 3 + 165299245 AAT i papAnu2.chr4 I 9 C 0 s chlSab2.chr13 96751881 3 + 98384682 CAC i chlSab2.chr13 C 0 I 367 e calJac3.chr4 169961973 0 + 171630274 C e canFam3.chr1 56231224 0 + 122678785 C e rheMac3.chr4 168196097 97 + 169853907 I a score=27116.000000 s hg38.chr6_KB021644v2_alt 174314 53 + 185823 ACGCACAGTGGA-------ATCGGAACTGTATCCAATGCA-CCCACGTGCACAGTGGAATC---------------- s panTro4.chr6 170763674 53 + 172623881 GTGCACAGTGGA-------ATCGGAACTGTATCCAATGCA-CCCACACGCACAGTGGAATC---------------- i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172520260 53 + 174210431 ACGCACAGTGGA-------ATCAGAACTGTATCCAATGCA-CTCACATGCACAGTGGAATC---------------- i ponAbe2.chr6 C 0 I 607 s nomLeu3.chr3 156379421 53 + 157873769 ATGCACAGTGGA-------ATCAGAACTGTATCCAATGCA-CCCACATGCACAGTGGAATC---------------- i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169150135 76 - 170955103 ACCCACCTATGACATGTCCATCTCAATGGTGTCCAATGCA-CCACCCTGCTTAATACCCACCTATGACATGTTCATC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163966427 61 + 165299245 ACCCACCTATGACATGTCCATCTCAATGGTGTCCCATGCACCCACCTTGTTTAATACCCAC---------------- i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169961973 0 + 171630274 C e canFam3.chr1 56231224 0 + 122678785 C e chlSab2.chr13 96751884 367 + 98384682 I e rheMac3.chr4 168196097 97 + 169853907 I a score=14046.000000 s hg38.chr6_KB021644v2_alt 174367 39 + 185823 GGAACTGTATCCAATGCACCC----------------------ACGTGCACAGTGGAATCG s panTro4.chr6 170763727 39 + 172623881 GGAACTGTATCCAATGCACCC----------------------ACGTGCACAGTGGAATCG i panTro4.chr6 C 0 I 152 s ponAbe2.chr6 172520920 39 + 174210431 AGAACTGTATCCAATGCACCC----------------------ACATGCACAGTGGAATCA i ponAbe2.chr6 I 607 C 0 s nomLeu3.chr3 156379474 39 + 157873769 AGAACTGTATCCAATGCACCC----------------------ACATGCACAGTGGAATCA i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169150211 55 - 170955103 TCAATGGTATCCAATGCACCCACCCTTTTAATACCCATCTATGACATGTTCATCT------ i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163966488 17 + 165299245 --------------------------------------CTATGACATGTCCATCT------ i papAnu2.chr4 C 0 C 0 e calJac3.chr4 169961973 0 + 171630274 C e canFam3.chr1 56231224 0 + 122678785 C e chlSab2.chr13 96751884 367 + 98384682 I e rheMac3.chr4 168196097 97 + 169853907 I a score=19540.000000 s hg38.chr6_KB021644v2_alt 174406 18 + 185823 GAACTGTATCCAATGCAC s panTro4.chr6 170763918 18 + 172623881 GAACTGTATCCAATGCAC i panTro4.chr6 I 152 C 0 s ponAbe2.chr6 172520959 18 + 174210431 GAACTGTATCCAATGCAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156379513 18 + 157873769 GAACTGTATCCAATGCAC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169150266 18 - 170955103 CAATGGTGTCCAATGCAT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163966505 18 + 165299245 CAATGGTGTCCAATGCAC i papAnu2.chr4 C 0 I 202 e calJac3.chr4 169961973 0 + 171630274 C e canFam3.chr1 56231224 0 + 122678785 C e chlSab2.chr13 96751884 367 + 98384682 I e rheMac3.chr4 168196097 97 + 169853907 I a score=2000.000000 s hg38.chr6_KB021644v2_alt 174424 2 + 185823 CC s panTro4.chr6 170763936 2 + 172623881 CC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172520977 2 + 174210431 CC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156379531 2 + 157873769 CC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169150284 2 - 170955103 CC i macFas5.chr4 C 0 I 31 e calJac3.chr4 169961973 0 + 171630274 C e canFam3.chr1 56231224 0 + 122678785 C e chlSab2.chr13 96751884 367 + 98384682 I e papAnu2.chr4 163966523 202 + 165299245 I e rheMac3.chr4 168196097 97 + 169853907 I a score=6392.000000 s hg38.chr6_KB021644v2_alt 174426 14 + 185823 AGAGGCACAGTGGA s panTro4.chr6 170763938 14 + 172623881 ACAGGCACAGTGGA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172520979 14 + 174210431 ACACGCACAGTGGA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156379533 14 + 157873769 ACATGCACAGTGGA i nomLeu3.chr3 C 0 C 0 e calJac3.chr4 169961973 0 + 171630274 C e canFam3.chr1 56231224 0 + 122678785 C e chlSab2.chr13 96751884 367 + 98384682 I e papAnu2.chr4 163966523 202 + 165299245 I e rheMac3.chr4 168196097 97 + 169853907 I e macFas5.chr4 169150286 31 - 170955103 I a score=5360.000000 s hg38.chr6_KB021644v2_alt 174440 9 + 185823 ATCAGAACT s panTro4.chr6 170763952 9 + 172623881 ATCAGAACT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172520993 9 + 174210431 ATCAGAACT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156379547 9 + 157873769 ATCAGAACT i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169150317 9 - 170955103 ATCTCAATG i macFas5.chr4 I 31 C 0 e calJac3.chr4 169961973 0 + 171630274 C e canFam3.chr1 56231224 0 + 122678785 C e chlSab2.chr13 96751884 367 + 98384682 I e papAnu2.chr4 163966523 202 + 165299245 I e rheMac3.chr4 168196097 97 + 169853907 I a score=2865.000000 s hg38.chr6_KB021644v2_alt 174449 2 + 185823 GT s panTro4.chr6 170763961 2 + 172623881 GT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172521002 2 + 174210431 GT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156379556 2 + 157873769 GT i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169150326 2 - 170955103 GT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163966725 2 + 165299245 GT i papAnu2.chr4 I 202 C 0 e calJac3.chr4 169961973 0 + 171630274 C e canFam3.chr1 56231224 0 + 122678785 C e chlSab2.chr13 96751884 367 + 98384682 I e rheMac3.chr4 168196097 97 + 169853907 I a score=700.000000 s hg38.chr6_KB021644v2_alt 174451 1 + 185823 A s panTro4.chr6 170763963 1 + 172623881 A i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172521004 1 + 174210431 A i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156379558 1 + 157873769 A i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169150328 1 - 170955103 G i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163966727 1 + 165299245 G i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96752251 1 + 98384682 A i chlSab2.chr13 I 367 C 0 e calJac3.chr4 169961973 0 + 171630274 C e canFam3.chr1 56231224 0 + 122678785 C e rheMac3.chr4 168196097 97 + 169853907 I a score=21711.000000 s hg38.chr6_KB021644v2_alt 174452 10 + 185823 TCCAATGCAC s panTro4.chr6 170763964 10 + 172623881 TCCAATGCAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172521005 10 + 174210431 TCCAATGCAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156379559 10 + 157873769 TCCAATGCAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168196194 10 + 169853907 TCCAATGCAT i rheMac3.chr4 I 97 C 0 s macFas5.chr4 169150329 9 - 170955103 TCCAATGCA- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163966728 10 + 165299245 TCCAATGCAT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96752252 10 + 98384682 TCCAATGCAC i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169961973 0 + 171630274 C e canFam3.chr1 56231224 0 + 122678785 C a score=-3752.000000 s hg38.chr6_KB021644v2_alt 174462 1 + 185823 -G s panTro4.chr6 170763974 1 + 172623881 -C i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172521015 1 + 174210431 -C i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156379569 1 + 157873769 -T i nomLeu3.chr3 C 0 I 608 s rheMac3.chr4 168196204 1 + 169853907 -C i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169150338 1 - 170955103 -C i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163966738 1 + 165299245 -C i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96752262 1 + 98384682 -T i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56231224 1 + 122678785 G- i canFam3.chr1 C 0 C 0 e calJac3.chr4 169961973 0 + 171630274 C a score=142430.000000 s hg38.chr6_KB021644v2_alt 174463 50 + 185823 CACCCTGCTTAATACCCACCTATGACATGTCCATCTCAATGGTGTCCAAT s panTro4.chr6 170763975 50 + 172623881 CACCCTGCTTAATACCCACCTATGACATGTCCATCTCAATGGTGTCCAAT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172521016 50 + 174210431 CACCCTGCTTAATACCCACCTATGACATGTCCATCTCAATGGTGTCCAAT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156380178 50 + 157873769 CACCCTACTTAATACCCACATATGACATATCCATCTCAATGGTGTCCAAT i nomLeu3.chr3 I 608 C 0 s rheMac3.chr4 168196205 50 + 169853907 CACCCTGGTTAATATGCACCTATGACATGTCCATCTCAATGGTGTCCAAT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169150339 50 - 170955103 CACCCTGCTTAATACCCACCTATGGCATGTCCATCTCAATGGTGTCCAAT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163966739 50 + 165299245 CACCCTGGTTAATATGCACCTATGACATGTCCATCTCAATGGTGTCCAAT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96752263 50 + 98384682 CACCCTGCTTAGTACCCACCTATGACATGTCCATCTCAATGGTGTCCAAT i chlSab2.chr13 C 0 I 164 s calJac3.chr4 169961973 50 + 171630274 CACCCTGTTCAATACCCACCTATAACATGTCCATCTCAACGGCGTCCAGT i calJac3.chr4 C 0 C 0 s canFam3.chr1 56231225 7 + 122678785 CACCCTG------------------------------------------- i canFam3.chr1 C 0 C 0 a score=1474961.000000 s hg38.chr6_KB021644v2_alt 174513 465 + 185823 GCACCCACCCTGTTTAATACCCACCTATGCTGTGCCCATCTCAATGACACATACCCGTGTCAGAA--------------AGTAGCTGTAAAAGCATGTGTCTGGTATTTACGGTTTGGGCTGCTTT-GCCTGCTGTTTCTCTTACCAGAAATGACAGAACATCCTTGGCGATGGCTCCTGCACACTTTCCAAGTGTGGTGTTGAAGGAGCAGCTTTTTAATCAG-TTTCATGATGGGGAACCTTTTCTTCTCTGCAGTTT-TCCCTGAAGAAGGtggctctgtgctgt---tctggttttctc------tgtctcggtctctatccctT------TTTGAGTTGCCTTTGCAGGTTTGTTATATATTTGTGGTTATAGAAAT-GCAACTTAAACCCCACTGGATGAGAAGACACACTTTGTATTTGGAGTTGAAGCTCTGGGCAGATCCTACT--GGGCATAACAGGGATGCCCTGACACTTCCT-GTGGCTGCCATTGGT s panTro4.chr6 170764025 465 + 172623881 GCACCCACCCTGTTTAATACCCACCTATGCTGTGCCCATCTCAATGACACATACCCGTGTCAGAA--------------AGTAGCTGTAAAAGCATGTATCTGGTATTTACGGTTTGGGCTGTTTT-GCCTGCTATGTCTCTTACCAGAAATTACAGAACGTCCTTGGCGATGGCTCCTGCACACTTTCCAAGTGTGGTGTTGAAGGAGCAGCTTTTTAATCAG-TTTCATGATGGGGAACCTTTTCTTCTCTGCAGTTT-TCCCTGAAGAAGGTGGCTCTGCGCTGT---TCTGGTTTTCTC------TGTCTCGGTCTCTATCCCTT------TTTGAGTTGCCTTTGCAGGTTTGTTATATATTTGTGGTTATAGAAAT-GCAACTTAAACCCCACTGGATGAGAAGACACACTTTGTATTTGGAGTTGAAGCTCTGGGCAGATCCCACT--GGGCATAACAGGGATGCCCTGACACTTCCT-GTGGCTGCCATTGGT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172521066 467 + 174210431 GCACCCACCCTGTTTAATACCCACCTATGCTGTGCCCATCTCAATGACACATACATGTGTCAGAA--------------AGTAGCTGTAATAGCATGTATCTGGTATTTACGGTTTGGGCTGTTTT-GCCTGGTATTTCTCTTACCAGAAATTACAGAATGTCCTTGGCGATGGCTCCTGCACACTTTCCAAGTGTGGTGTTGAAGGAGCAGCTTTTTAATCAG-TTTCATGATGGGGAACCTTTTCTTTTCTGCAGTTT-TCCCTGAAGAAGGTGGCTCTGTGCTGT---TCTGGTTTTCTC----TTTGTCTCAATCTCTATCCCTT------TTTGAGTTGTCTTTGCAGGTTTGTTTTATATTTGTGGTTATAGAAAT-GCAATTTAAACCCCACTGGATGAGAAGACATACTTTATATTTGGAGTTGAAGCTCTGGGCAGATCCCACT--GGGCATAACAGGGATGCCCTGATACTTCCT-GTGGCTGCCATTGGT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156380228 466 + 157873769 GCACCCACCCTGTTTAATACCCACCTATGCTGTGCCCATCTCAATGACGCATACATGTGTCAGAA--------------AGTAGCTGTAATAGCA-GTATCTGGTATTGACGGTTTGGGCTGTTTT-GCCTGCTATTTCTCTTACCAGAAATTACAGAACGTCCTTGGCGATGGCTCCTGCACACTTTCCAAGTGTGGTGTTGAAGGAGCAGCTTTGTAATCAG-TTTCATGATGGGGAACCTTTTCTTTTCTGCAGTTT-TCCCTGAAGAAGGTGGCTCTGTGCTGT---TCTGGTTTTCTC----TTTGTCTCAGTCTCTATCCCTT------TTTGAGTTGTCTTTGCAGGTTTGTTGTAAATTTGTGGTTACAGAAAT-GCAATTTAAACCCCACTGGATGAGAAGACACACTTAATATTTGGCGTTGAAGCTGTGGGCAGATCCCACT--GGGCGTAACAGGGATGCCCTGACACTTCCT-GTGGCTGCCATTGGT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168196255 467 + 169853907 GCACCCACCCTGGTTAATATCCACCTATGCTGTGCCCATCTCAATGACACATACATGTGTCAGAA--------------AGTAGCTGTAATAGCATGTCTCTGGTATTTACAGTTTGGGCTGTTTT-GCCTGCGATTTCTCTTACCAGAAATTACAGAACGTCCTTGGCGATGGCTCCTGCACACTTTCCAAGTGTGGTGTTGAAGGAGCAGCTTTTTAATCAG-TATCGTGACAGAGAATCTTTTCTTTTCTGCAGTTT-TCCCTGAGGAGGGTGGCTCTGTGCTGT---TCTGGTTTTCTG----TCTGTCTCGGTCTCTATACCTT------TTTGAGTTGTCTTTGCAGGTTTGTTATATATTTGTGGTTACAGAAGT-ACAATTTAAACCCCACTGGATGAGAAGACACACTTTGTATTTGGAGTTGAAGCTCTGGGCAGATCCCACT--GGGCGTAACAGGGATGCCCTGACACTTCCT-ATGGCTGCCATTGGT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169150389 467 - 170955103 GCACCCACCCTGGTTAATATCCACCTAAGCTGTGCCCATCTCAATGACACATACATGTGTCAGAA--------------AGTAGCTGTAATAGCATGTCTCTGGTATTTACAGTTTGGGCTGTTTT-GCCTGCGATTTCTCTTACCAGAAATTACAGAACGTCCTTGGCGATGGCTCCTGCACACTTTCCAAGTGTGGTGTTGAAGGAGCAGCTTTTTAATCAG-TATCGTGACAGAGAATCTTTTCTTTTCTGCAGTTT-TCCCTGAGGAGGGTGGCTCTGTGCTGT---TCTGGTTTTCTG----TCTGTCTCGGTCTCTATACCTT------TTTGAGTTGTCTTTGCAGGTTTGTTATATATTTGTGGTTACAGAAGT-ACAATTTAAACCCCACTGGATGAGAAGACACACTTTGTATTTGGAGTTGAAGCTCTGGGCAGATCCCACT--GGGCGTAACAGGGATGCCCTGACACTTCCT-ATGGCTGCCATTGGT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163966789 467 + 165299245 GCACCCACCCTGGTTAATATCCACCTATGCTGTGCCCATCTCAATGACACATACATGTGTCAGAA--------------AGTAGCTGTAATAGCATGTCTCTGGTATTTACAGTTTGGGCTGTTTT-GCCTGCGATTTCTCTTACCAGAAATTACAGAAAGTCCTTGGCGATGGCTCCTGCACACTTTCCAAGTGTGGTGTTGAAGGAGCAGCTTTTTAATCAG-TTTCGTGACagagaatcttttcttttctgcagTTT-TCCCTGGGCGGGGTGGCTCTGTGCTGT---TCTGGTTTTCTG----TCTGTCTCGGTCTCTATACCTT------TTTGAGTTGTctttgcaggtttgttatatatttgTGGTTACAGAAGT-GCAATTTAAACCCCACTGGATGAGAAGACACACTTTGTATTTGGAGTTGAAGCTCTGGGCAGATCCCACT--GGGCGTAACAGGGATGTCCTGACACTTCCT-ATGGCTGCCATTGGT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96752477 467 + 98384682 GCACCCACCCTGGTTAATACCCACCTATGCTGTGCCCATCTCAATGGCACATACACGTGTCAGAA--------------AGTAGCTGTAATAGCATGTCTCTGGTATTTACGGTTTCGGCTGTTTT-GCCTGCGATTTCTCTTATCAGAAATTACAGAACGTCCTTGGCGATGGCTCCTGCACACTTTCCAAGTGTGCTGTTGAAGGAGCACCTTTTTAATCAG-TTTCGTGACAGAGAATCTTTTCTTTTCTGCAGTTT-TCCCTGAGGAGGGTGGCTCTGTGCTGT---TCTGGTTTTCCA----TCTGTCTCGGTCTCTATCCCTT------TTTGAGTTGTCTTTGCAGGTTTGTTATATATTTGTGGTTACAGAAGT-GCAATTTAAACCCCACTGGATGAGAAGACACACTTTGTATTTGGAGTTGAAGCTCTGGGCAGATCCCACT--GGGCATAACAGGGATGCCCTGACACTTCCT-ATGGCTGCCATTAGT i chlSab2.chr13 I 164 C 0 s calJac3.chr4 169962023 467 + 171630274 GCCCACACCCC-TTTAATACCCACCCATGCTGTGCCCATCTTGATGACGCATCCATGTGTCAGAA--------------AGTAGCCGTAATCACATTTATCTGGTATTTATGGTTTGGGCTGCTTTGGCCGGCGATT--TCTTACCAGAAATTACAGAACGTCCTTGGCACTGGCTCCTGCACGCTTTCCAAGTGTGGTGTTTAGGGAGCAGTTTTTTAATCAG-TTTCATGGCGGGGAATGTTTTCTTTCCTGTGGCAG-TCCCTGAACAGGGTAGCTCTGCGCTGCCTGCTTGTCTGTCTC----TTTGTCTTGGGCTCCATCCCTT------TTTCGGTTCTCTTTGCAGGTTTGTCATATGTTTGTGGTTATGGAAAT-GTAACTTAACCCCCACTGGATGAGAAGATGCACGTTATATTTGGAGTTGGGCCTCTGGACAGATCCCATT--GCGTGCAGC-TGGATGTCCCAACTCTTCCT-GTGGCTGCCATCAGT i calJac3.chr4 C 0 I 702 s canFam3.chr1 56231232 490 + 122678785 ------AACATATTGTACATCCATCTACACTGTGCATATTTGAGTGATGCATTAATGTGTCTGTGAACTTGGGTTCTTCAGTAACTGTAATGGCATCTCTGATGCACTCATGGTTTTGATCATTTCAGTCTGGG--TTCTCTTAGTAGACATTACAGAAAGTTCTTGGCTACTGTTCATGTATTTATTTCAAGTATGGTGTTTATTTACTAGCTTGTCAATTAGATGACTTGAGTGGCAGTCTTTTCTTCTCCATAGTTTGGTCTTCAAGATGGTGGTTCTGTCTTGT---TTCAGTTTTCTGTACCTTTGGCTTGGTAACTGGTCTTTTTGGGCTTTGAATTCTCTTTGCAGATTTCTCCTCTATTTGTGACTATGGAGATGGCAATTTAAAGCCCTTCTGAGGAGAAGATTCACTTTATGTTTACAGTTGAGGCTCTGAGCAGATCCCACTCGGGTGGCAGCATGAATGCTGTGATGTTTCCTAGAGAACACCATAGTT i canFam3.chr1 C 0 C 0 a score=-2269.000000 s hg38.chr6_KB021644v2_alt 174978 2 + 185823 GA s panTro4.chr6 170764490 2 + 172623881 GA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172521533 1 + 174210431 G- i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156380694 1 + 157873769 G- i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168196722 1 + 169853907 G- i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169150856 1 - 170955103 G- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163967256 1 + 165299245 G- i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96752944 1 + 98384682 G- i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169962490 702 + 171630274 I e canFam3.chr1 56231722 0 + 122678785 C a score=609519.000000 s hg38.chr6_KB021644v2_alt 174980 212 + 185823 CACGTCCTGCCCTCCACTGGATAACATCATGCTGGGGTCATGGTTCTCATCCATGGTCAAGAGACCGTGTGCCTTACACACTGCTCCTCTGAGAGCCACTGAAGAGGGTGGAGGAAGGGACAGCAAGGAGAGAGGGAAGCAAAGTACTGGATCTGTTTTTATACATTGGGCT--------TCCATTTGTGTTTGAAGTAAGGATTCTATAacacacacac s panTro4.chr6 170764492 212 + 172623881 CACGTCCTGCCCTCCACTGGATAACATCATGCTGGGGTCATGGTTCTCATCCATGGTCAAGAGACCGTGTGCCTTACACACTGCTCCTCTGAGAGCCACTGAAGAGGGTGGAGGAAGGGACAGCAAGGAGAGAGGGAAGCAAAGTACTGGATCTGTTTTTATACATTGGGCT--------TCCATTTGTGTTTGAAGTAAGGATTCTATAACACACACAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172521534 211 + 174210431 -ACGTCCTGCCCTCCACTGGATGACATCATGCTGGGGTCATGGTTCCCATCCATGGTCAAGAGACCCTGTGCCTTACACACTGCTCCTCTGAGATCCACTGAAGAGGATGGAGGAAGGGACAGCAAGGAGAGAGGGAAGCAAAGTACTGGATTTGTTTTTATACATTGGGCT--------TCCATTTGTGTTTGAAGTAAGGATTCTATAACACACACAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156380695 211 + 157873769 -ATGTCCTGCCCTCCACTGGATAATATCATGCTGGGGTCATGGTTCCCATCCATGGTCAAGAGACCCTGTGCCTTACACACTGCTCCTCTGAGAGCCACTgaagagggtggagggaggaacagcaaggagagagggaagcagggTACTGGATCTGTTTTTATACATTGGGCT--------TCCATTTGTGTTTGAAGTAAGGGTTCTAacacacacacac i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168196723 211 + 169853907 -ACTCCCTGCCCTCCACTGGATAACATCATTCTGGGGTCATGATTCCCATCCATGGTCAAGAGATCCTGTGCCTTACACACGGCTCCTCTGAGAGCCACTGAAGAACGTGGAGGAAGGGACAGCAAGGAGAGAGGGAAACAGAGTACTGGATCTGTTTTTATACATTGGGCT--------TCCATTTGTGTTTGAAGTAAGGATTCTATAacacacacgc i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169150857 211 - 170955103 -ACTCCCTGCCCTCCACTGGATAACATCATTCTGGGGTCATGATTCCCATCCATGGTCAAGAGATCCTGTGCCTTACACACGGCTCCTCTGAGAGCCACTGAAGAGCGTGGAGGAAGGGACAGCAAGGAGAGAGGGAAACAGAGTACTGGATCTGTTTTTATACATTGGGCT--------TCCATTTGTGTTTGAAGTAAGGATTCTATAacacacacgc i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163967257 211 + 165299245 -ACTCCCTGCCCTCCACTGGATAACATCATTCTGGGGTCATGATTCCCATCCATGGTCAAGAGATCCTGTGCCTTACACACGGCTCCTCTGAGAACCACTGAAGAGCGTGGAGGAAGGGACAGcaaggagagagggaagcagaGTACTGGATCTGTTTTTATACATTGGGCT--------TCCATTTGTGTTTGAAGTAAGGATTCTataacacacacgc i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96752945 211 + 98384682 -ACTCCCTGCCCTCCACTGGATAACATCATTCTGGGGTCATGATTCCCATCCATGGTCAAGAGATCCTGTGCCTTACACACGGCTCCTCTGAGAGCCACTGAAGAGGGTGGAGGAAGGGACAGCAAGGAGAGAGGGAAGCAGAGTACTGGGTCTGTTTTTATACATTGGGCT--------TCCATTTGTGTTTGAAGTAAGGATTCCATGacacacacgc i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169963192 215 + 171630274 CACTCCCCACCCTCCACTGGATAACGCCAAGCTGGGGTCAGGGTTCCCTCTCATAGTCAAGGGACCCTGTACCTTGCACACTGTCCCTCTAAAAGCCACTGAAGAGGGTGGCAGAAGAGGCAGCAAG--GAGAGGGAAGCAGAGCACCGGCCATGTTTATACACA---GACTGTATAAACTCCATTAGTGTTTAGAGTAAGGATTCTATACcacccacac i calJac3.chr4 I 702 I 605 s canFam3.chr1 56231722 128 + 122678785 ---GCTCTGTCCAGCAATGGATAGTA-CACACTAGAG------TTTTCATCAGTGATCTATGAACACTCTATATCACACACGGTTGCT-TCAGAACTGCTGAAGAGGGAAGAGG-AGGGACAG---------------------------------TGTCATAC----------------ACCATGTGT------------------------------- i canFam3.chr1 C 0 C 0 a score=1572659.000000 s hg38.chr6_KB021644v2_alt 175192 544 + 185823 acaca----------------------tacacacaATTATAAAATCACAGCATCAGGATAACCCAGGATGCCTCATTAACCTGTGAATAAAGAGACAGGGTCAGGCTAACAATAAAAGCCCAGATTGTACGGGAGTTGAAG-----ACATCTTGGCCCTCTGCAAG-ATGACTCTCTCACACAGACTTGGAAACAGTTTGAGCCAACTAGCT---ATGGAGCCATA--------------------------------------------------------ACTCCTATCTGCACTGGCAC--------------------AATTCCCCAGATTCCAGAGCAGAAGGCTGCCTGGCTG-GACGTGAGAGTGGAGACCTCCCTTGCCTCCCTCATCTCTCTGGGTCAGGCACTATCAGAGGAAA-CCAAGGCTGTA-CACTTGTGCCTGG-----ATGGCCTCTCAAGTGTTGGTGCCATTGGAGAAGCAGAAGCACACATTTTACAGAGTTTGGAGGAACAGGGACTACAGAGCCCCCGTATTGAGCTTAGAACTAAATTGATATTTATCAAAAGGCTTCCCTTAGGGGCTGGA---GTAC--------ATTTTAAAATCCCTTTTTTCTATGCAGTTTAAAATATAACGCAGTCCCTTAAATGCCCTC s panTro4.chr6 170764704 538 + 172623881 ACACA----------------------------CAATTATAAAATCACAGCATCAGGATAACCCAGGATGCCTCATTAACCTGTGAATAAAGAGACAGGGTCAGGCTAACAATAAAAGCCCAGATTGTACGGGAGTTTAAG-----ACATCTTGGCCCTCTGCAAG-ATGACTCTCTCACACAGACTTGGAAACAGTTTGAGCCAACTAGCT---ATGGAGCCATA--------------------------------------------------------ACTCCTATCTGCACTGGCAC--------------------AATTCCCCAGATTCCAGAGCAGAAGGCTGCCTGGCTG-GACATGAGAGTGGAGACCTCCCTTGCCTCCCTCATCTCTCTGGGTCAGGCGCTATCAGAGGAAA-CCAAGGCTGTA-CACTTGTGCCCGG-----ATGGCCTCTCAAGTGTTGGTGCCATTGGAGAAGCAGAAGCACACATTTTACAGAGTTTGGAGGAACAGGGACTACAGAGCCCCCGTATTGAGCTTAGAACTAAATTGGTATTTATCAAAAGGCTTCCCTTAGGGGTTGGA---GTAC--------ATTTTAAAATCCTTTTTTTCTATGCAGTTTAAAATATAACCCAGTCCCTTAAATGCCCTC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172521745 538 + 174210431 A--------------------------------CAATTATAAAATCACAACATCAGGATAACCCAGGATGCCTCACTAACCCGTGAATAAAGAGACAGGGTCATGCTAACAATAAAAGCCCAGATTGTGCGGGAGTTTAAGACATCACATCTTGGCCCTCTGCAAG-ATGACTGTCTCACACAGGCTTGGAAATGGTTTGAGCCAACTAGCT---ATGGAGCCATA--------------------------------------------------------ACTCCTACCTGCA-TGGCAC--------------------AATTCCTCAGATTCCAGAGCAGAAGGCTGCCTGGCTG-GACGTCAGAGTGGAGACCTCCCTTGCCTCCCTCGTCTCTCTGGGTCAGGCACTATCAGAGGAAA-CCAAGGCTGTG-CACTTGTGCCCGG-----ATGGCCTCTCAAGTGTTGGTGCCATTGGAGAAGCAGAAGCACACATTTTACAGAGTTTGGAGGCACAGGGACCACAGAGCCCCCGTATTGAGCTTAGAACTAAATTGATGTTTATCAAAAGGCTTCCCTTAGGAGTTGGA---GTAC--------ATTTTAAAATCCCTTTTTTCTATGCAGTTTAAAATATAATCCAGTCCCTTAAATGCTCTC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156380906 552 + 157873769 acacacacacacacacacacacacacacacacaAAATTATAAAATCACAGCATCAGGATAACCCAGGATGCCTCATTAACCTGTAAATAAAGAGACAAGGTCATGCTAACAATAAAAGCCCAGATTGTACGGGAGTTTAAG-----ACATCTTGGCCCTCTGCAAG-ATGACTGTCTCACACAGCCTTGGAAACGGTTTGAGCCAACTAGCT---ATGGAGCCATA--------------------------------------------------------ACTCCTATCTGCA-TGGCAC--------------------AATTCCCCAGATTCCAGAGCAGAAGGCTGCCTGGCTG-GACATCAGAGTGGAGACCTCCCTTGCCTCCCTCGTCTCTCTGGGTCAGGCACTATCAGAGGAAA-CCAAGGCTGTA-CACTTGTGCCCGG-----ATGGCCTCTCAAGTGTTGGTGCCATTGGAGAAGCAGAAGCACACATTTTACAGAGTTTGGAGGTGCAGGGACTACAGAGCCCCCGTATTGAGCTTAGAACTAAATTGATATTTATCGAAAGGCTTCCGTTAGGGGTTGGA---GTAC--------ATTTTAAAATCCCTTTTTTCTATGCAGTTTAAAATATAACCCATTTT------------- i nomLeu3.chr3 C 0 I 4 s rheMac3.chr4 168196934 554 + 169853907 acaca----------cgcacacacacatacacaAAATTATAAAATCACAGCATCAGGATAACCCAGGATGTCTCATTAACCTGCGAATAAAGAGACAGGGTTATGCTAACAATAAAAGACCAGATTGTATGGGAGTTTAAA-----ACATCTTGGCCCTCTGCAAA-ATGACCCTCTCACACGGGCTTGGAAAGGGTTTGAGCCAACTAGCT---ATGGAGCCATA--------------------------------------------------------ACTCCTATCTGCA-TGGCAC--------------------AGTTCCCCAGATTCCAGAGGAGAAGGCTGACTGGCTG-GACATCAGAGTGGAGACCTCCCTTGCCTCCCTCATCTCTCTGGGTCAGGCACCATCAGAGGAAA-CCAAGGCTGTG-CAGTTGTGCCTGG-----ATGGCCTCTCAAATGTTGGTGCCATTAGAGAAGCAGAAGCACACATTTTGCAGCGTTT-GAAGAGCAGGGACTACAGAGCCCCTGTATTGAGCTTAGAACTAATTTGATATTTATCAAAAGGCTTCGCTTAGGGGTTGGA---GCAC--------ATTTTAAAATCCTTTTACTCTTTGCAGTTTAAAATATAACCCAGTCCCTTAAATGCCCTC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169151068 554 - 170955103 acaca----------cgcacacacacatacacaAAATTATAAAATCACAGCATCAGGATAACCCAGGATGTCTCATTAACCTGCGAATAAAGAGACAGGGTTATGCTAACAATAAAAGACCAGATTGTATGGGAGTTTAAA-----ACATCTTGGCCCTCTGCAAA-ATGACCCTCTCACACGGGCTTGGAAAGGGTTTGAGCCAACTAGCT---ATGGAGCCATA--------------------------------------------------------ACTCCTATCTGCA-CGGCAC--------------------AGTTCCCCAGATTCCAGAGGAGAAGGCTGACTGGCTG-GACATCAGAGTGGAGACCTCCCTTGCCTCCCTCATCTCTCTGGGTCAGGCACCATCAGAGGAAA-CCAAGGCTGTG-CAGTTGTGCCTGG-----ATGGCCTCTCAAATGTTGGTGCCATTGGAGAAGCAGAAGCACACATTTTGCAGCGTTT-GAAGAGCAGGGACTACAGAGCCCCTGTATTGAGCTTAGAACTAATTTGATATTTATCAAAAGGCTTCGCTTAGGGGTTGGA---GCAC--------ATTTTAAAATCCTTTTACTCTTTGCAGTTTAAAATATAACCCAGTCCCTTAAATGCCCTC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163967468 554 + 165299245 acaca----------cgcacacacacatacacaaaattataaaatcacaGCATCAGGATAACCCAGGATGTCTCATTAACCTGCGACTAAAGAGACAGGGTTATGCTAACAATAAAAGACCAGATTGTATGGGAGTTTAAA-----ACATCTTGGCCCTCTGCAAA-ATGACCCTCTCACACGGGCTTGGAAAGGGTTTGAGCCAACTAGCT---ATGGAGCCATA--------------------------------------------------------ACTCCTATCCGCA-CGGCAC--------------------AGTTCCCCAGATTCCAGAGGAGAAGGCTGACTGGCTG-GACATCAGAGTGGAGACCTCCCTTGCCTCCCTCATCTCTCTGGGTCAGGCACCATCAGAGGAAA-CCAAGGCTGTG-CAGTTGTGCCTGG-----ATGGCCTCTCAAATGTTGGTGCCATTGGAGAAGCAGAAGCACACATTTTGCAGCGTTT-GAAGAGCAGGGACTACAGAGCCCCTGTCTTGAGCTTAGAACTAATTTGATATTTATCAAAAGGCTTCCCTTAGGGGTTgga---gcac--------attttaaaatccttttactCTTTGCAGTTTAAAATATAACCCAGTCCCTTAAATGCCCTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753156 554 + 98384682 acaca----------tgcacacacacatacacaAAATTATAAAATCACAGCATCAGGATAACCCAGGATGTCTCATTAACCTGCAAATAAAGAGACAGGGTTATGCTAACAATAAAATACCAGATTGTATGGGAGTTTAAT-----ACATCTTGGCCCTCTGCAAG-ATGACCCTCTCACACGGGCTTGGAAAGGGTTTGAGCCAACTAGCT---ATGGAGCCATA--------------------------------------------------------ACTCCTATCCGCA-CGGCAC--------------------AGTTCCCCAGATTCCAGAGAAGAAGGCTGACTGGCTG-GACATCAGAGTGGAGACCTCCCTTGCCTCCCTCATCTCTCTGGGTCGGGCACCATCAGAGGAAA-CCAAGGCTGTG-CAGTTGTGCCTGG-----ATGGCCTCTCAAATGTTGGTGCCACCGGAGAAGCAGAAGCACACATTTTGCAGCGTTT-GAAGAGCAGGGACTACAGAGCCCCTGTAGTGAGCTTAGAACTAATTTGATATTTATCAAAAGGCTTCCCTTAGGGGTTGGA---GCAC--------ATTTTAAAATCCTTTTATTCTTTGCAGTTTAAAATATAACCCAGTCCCTTAAATGCCCTT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964012 541 + 171630274 ----------------------acacacagacacacTCGTAAAAT---GGCATCAGGATAACCTGAGATGCCTCATTGACCTGTGAATAAGGAGACAGCGTCATGCTAACAGTAAAAACCCGGATTGCCCGGGAGTTTAAG-----ACATCTTGG-CCTCTGAAGG-AGAGCTGTCTCACACAGGCTTGGAGACGGTTTGAGCCAACAGTCTATCATGAAGCCATA--------------------------------------------------------ACTCCTGTCTGCA----------------------------ATTCCCCAGGGTCCAGAGAAGGAGGCTGCCGGGCTG-GACAGCACAATGGAGACCTCCC-TGCCTCCCTCATCTCTCTGGGTCAGGCACCATCAGAGGAAGCCCAGGGCTGTG-CCCTTGCGCCT-G-----ATGGCC-CTCACGTGTTGGTGCAACTGGAGAGGCAGAAGCACACATGTTACAGAGTCTGGAGGAGTGGGGACTGCAGAGTCCCCTTACTGAGCTTAGAACCAATTTGATATTTATGAAAAGGCTTCCATTAGAGGTTGAA---GCACATTTAAAAATTTTAAAATCCCTTTTATCCAAGCTGTTTAAAATATAACCCAGTCCCTTGAATAGCCTC i calJac3.chr4 I 605 C 0 s canFam3.chr1 56231850 596 + 122678785 --------------------------------ATAATTATAAAACATTAGCATCAGAATAACACATGATGCCTTGTTAACCTGTGAAT----GGACAGGATCTTGTTAACAATCAAAACACCAATTTTACTGGAGTTAAGG-----A---------ATTTTGCAAATATGTCTGTTTCATAGGAGCTTGGAAACAGTTTGGACCAACCATC----ATAAAATCATACAATTCCATCATAACTTCTGACCATGTTCTGGGCCAAGGCTGTGTCTACAGTACAGGCTCCCCTCCCCC-TGCCACCCCAACATGCTGGAGCCCAGAAGCCCTGGAAATCTAGAGGCTATGGCGGCTTTGTTGCTAAGTCCTAATGGAAACACC----GTCTTCCCCAT---TCTATATTAGTCATTCTCAGGAGAGTCCCAAAGCCTTGCCATTTGTACCCTAAACTTATGTTACTGGAAATGTTAGTGGAGGTAGTGAGGAAGAAACACAaaatttactcag----aacaagctgagaatatgtagccattttactaggctcaagactggttccatcttcctcataagccttcagttgggattagaaaaggaat--------ctttaacaatcttgtctttctatccagcctaaaatataacccaatagtttaaatagtctc i canFam3.chr1 C 0 I 73 a score=22790.000000 s hg38.chr6_KB021644v2_alt 175736 11 + 185823 C--GTTATTCCTC s panTro4.chr6 170765242 13 + 172623881 CTTGTTATTCCTC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172522283 13 + 174210431 CTTGTTATTCCTC i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168197488 13 + 169853907 CTTGTTATTGTTC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169151622 13 - 170955103 CTTGTTATTGTTC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968022 13 + 165299245 CTTGTTATTGTTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753710 13 + 98384682 GTTGTTATTGTTC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964553 13 + 171630274 CTTGTTATTGCTC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I e nomLeu3.chr3 156381458 4 + 157873769 I a score=33401.000000 s hg38.chr6_KB021644v2_alt 175747 15 + 185823 ACTATGTATGCCACT s panTro4.chr6 170765255 15 + 172623881 ACTATGTATGCCACT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172522296 15 + 174210431 ACTATGTATGCCACT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381462 13 + 157873769 GTGATGGAG--CATG i nomLeu3.chr3 I 4 C 0 s rheMac3.chr4 168197501 15 + 169853907 ACCATGTATGCCACT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169151635 15 - 170955103 ACCATGTATGCCACT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968035 15 + 165299245 ACCATGTATGCCACT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753723 15 + 98384682 ACCATGTATGCCACT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964566 15 + 171630274 ACCACGTATGCCACT i calJac3.chr4 C 0 I 26 e canFam3.chr1 56232446 73 + 122678785 I a score=45741.000000 s hg38.chr6_KB021644v2_alt 175762 28 + 185823 GCGGGGCTGCCCGGTGCACAGGGTCTGC s panTro4.chr6 170765270 28 + 172623881 GCGGGGCTGCCCGGTGCACAGGGTCTGC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172522311 27 + 174210431 GTGGGG-TGCCCGGTGCACAGGGTCTGG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381475 26 + 157873769 GTGGGAGCACCAGGTACACGGGGTC--A i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168197516 28 + 169853907 GCGGGGGTGCCCCGTCCACAGGGTCTGG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169151650 28 - 170955103 GCGGGGGTGCCCCGTCCACAGGGTCTGG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968050 28 + 165299245 GCTGGGGTGCCCCATCCACAGGGTCTGG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753738 28 + 98384682 GCAGGGGTGCCCCGTGCACAGGGTCTGG i chlSab2.chr13 C 0 I 60 e calJac3.chr4 169964581 26 + 171630274 I e canFam3.chr1 56232446 73 + 122678785 I a score=31428.000000 s hg38.chr6_KB021644v2_alt 175790 9 + 185823 GGTGTGCAG s panTro4.chr6 170765298 9 + 172623881 GGTGTGCAG i panTro4.chr6 C 0 I 61 s ponAbe2.chr6 172522338 9 + 174210431 GGTGTGCAG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381501 9 + 157873769 GGTGTGCAG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168197544 9 + 169853907 GGTGTGCAG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169151678 9 - 170955103 GGTGTGCAG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968078 9 + 165299245 GGTGTGCAG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753826 9 + 98384682 GGTGTGCAG i chlSab2.chr13 I 60 C 0 s calJac3.chr4 169964607 9 + 171630274 GGTGTGCAG i calJac3.chr4 I 26 C 0 e canFam3.chr1 56232446 73 + 122678785 I a score=20502.000000 s hg38.chr6_KB021644v2_alt 175799 7 + 185823 TCAGCCC s panTro4.chr6 170765368 7 + 172623881 TCAGCCC i panTro4.chr6 I 61 C 0 s ponAbe2.chr6 172522347 7 + 174210431 TCAGCCC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381510 7 + 157873769 TCAGCCC i nomLeu3.chr3 C 0 T 59 s rheMac3.chr4 168197553 7 + 169853907 TCAGGCC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169151687 7 - 170955103 TCAGGCC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968087 7 + 165299245 TCAGGCC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753835 7 + 98384682 TCAGCCC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964616 7 + 171630274 TCAGCCC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I a score=49598.000000 s hg38.chr6_KB021644v2_alt 175806 19 + 185823 TCCTGTGATGGAAGGTGAT s panTro4.chr6 170765375 19 + 172623881 TCCTGTGATGGAGCATGGT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172522354 19 + 174210431 TCCTGTGATAGAAGGTGGT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381458 19 + 157873769 TCCTGTGATGGAGCATGGT i nomLeu3.chr3 T 59 C 0 s rheMac3.chr4 168197560 19 + 169853907 TCCTGTGATGGAAGGCAGT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169151694 19 - 170955103 TCCTGTGATGGAAGGCGGT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968094 19 + 165299245 TCCTGTGATGGAAGGCAGT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753842 19 + 98384682 TCCTGTGATGGAAGGTGGT i chlSab2.chr13 C 0 T 95 s calJac3.chr4 169964623 19 + 171630274 TCCTGGGACGGAGGGTGGT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I a score=39688.000000 s hg38.chr6_KB021644v2_alt 175825 24 + 185823 GGGAACACCAGGTACACGGGGTC--A-- s panTro4.chr6 170765394 24 + 172623881 GGGAACACCAGGTACACGGGGTC--A-- i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172522373 26 + 174210431 GGGAACACCAGGTGCACAGGGTCTGG-- i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381477 24 + 157873769 GGGAGCACCAGGTACACGGGGTC--A-- i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168197579 24 + 169853907 GGGAATATCAGGTACATGGGGTC--A-- i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169151713 24 - 170955103 GGGAATATCAGGTACACGGGGTC--A-- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968113 24 + 165299245 GGGAATATCAGGTACACGGGGTC--A-- i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169964642 25 + 171630274 GGGAAGACCC-GTGCACAGTGTC--TGG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I e chlSab2.chr13 96753861 95 + 98384682 T a score=31428.000000 s hg38.chr6_KB021644v2_alt 175849 9 + 185823 GGTGTGCAG s panTro4.chr6 170765418 9 + 172623881 GGTGTGCAG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172522399 9 + 174210431 GGTGTGCAG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381501 9 + 157873769 GGTGTGCAG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168197603 9 + 169853907 GGTGTGCAG i rheMac3.chr4 C 0 I 118 s macFas5.chr4 169151737 9 - 170955103 GGTGTGCAG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968137 9 + 165299245 GGTGTGCAG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753766 9 + 98384682 GGTGTGCAG i chlSab2.chr13 T 95 C 0 s calJac3.chr4 169964667 9 + 171630274 GGTGTGCAG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I a score=21402.000000 s hg38.chr6_KB021644v2_alt 175858 7 + 185823 TCAGCCC s panTro4.chr6 170765427 7 + 172623881 TCAGCCC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172522408 7 + 174210431 TCAGCCC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381510 7 + 157873769 TCAGCCC i nomLeu3.chr3 C 0 T 59 s rheMac3.chr4 168197730 7 + 169853907 TCAGGCC i rheMac3.chr4 I 118 C 0 s macFas5.chr4 169151746 7 - 170955103 TCAGCCC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968146 7 + 165299245 TCAGCCC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753775 7 + 98384682 TCAGGCC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964676 7 + 171630274 TCAGCCC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I a score=47374.000000 s hg38.chr6_KB021644v2_alt 175865 17 + 185823 TCCTGTGATGGAAGGTG s panTro4.chr6 170765434 17 + 172623881 TCCTGTGATGGAAGGTG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172522415 17 + 174210431 TCCTGTGATAGAAGGTG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381458 17 + 157873769 TCCTGTGATGGAGCATG i nomLeu3.chr3 T 59 C 0 s rheMac3.chr4 168197737 17 + 169853907 TCCTGTGATGGAAGGCG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169151753 17 - 170955103 TTCTGTGATGGAGGGCG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968153 17 + 165299245 TTCTGTGATGGAGGGCG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753782 17 + 98384682 TCCTGTGATGGAGGGCG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964683 17 + 171630274 TCCTGTGATGGAGGACG i calJac3.chr4 C 0 T 119 e canFam3.chr1 56232446 73 + 122678785 I a score=81419.000000 s hg38.chr6_KB021644v2_alt 175882 34 + 185823 GTGGGA-ACACCAGGTACACGGGG--TCAGGTGTGCA s panTro4.chr6 170765451 36 + 172623881 GTGGGA-ACACCAGGTACACAGGGGCTGGGGTGTGCA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172522432 36 + 174210431 GTGGGA-ACACCAGGTACACAGGGTCTGGGGTGTGCA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381475 34 + 157873769 GTGGGA-GCACCAGGTACACGGGG--TCAGGTGTGCA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168197754 34 + 169853907 GTGGGA-ATATCAGGTACATGGGG--TCAGGTGTGCA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169151770 34 - 170955103 GTGGGG-ACACCAGGTCCATGGGG--TCAGGTGTGCA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968170 34 + 165299245 GTGGGG-ACACCAGGTCCATTGGG--TCAGGTGTGCA i papAnu2.chr4 C 0 I 292 s chlSab2.chr13 96753799 35 + 98384682 GTGGGGAATATCAGGTACACGGGG--TCAGGTGTGCA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964581 34 + 171630274 GTGGGA-ACGCCCCGTGTACAGGG--TCAGGTGTGCA i calJac3.chr4 T 119 C 0 e canFam3.chr1 56232446 73 + 122678785 I a score=1800.000000 s hg38.chr6_KB021644v2_alt 175916 1 + 185823 C s panTro4.chr6 170765487 1 + 172623881 G i panTro4.chr6 C 0 T 181 s ponAbe2.chr6 172522468 1 + 174210431 G i ponAbe2.chr6 C 0 I 61 s nomLeu3.chr3 156381509 1 + 157873769 G i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168197788 1 + 169853907 G i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169151804 1 - 170955103 G i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968496 1 + 165299245 G i papAnu2.chr4 I 292 C 0 s chlSab2.chr13 96753834 1 + 98384682 G i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964615 1 + 171630274 G i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I a score=119428.000000 s hg38.chr6_KB021644v2_alt 175917 43 + 185823 TCAGCCCTCCTGTGATGGAAGGTGGTGGGAACACCAGGTACAC s panTro4.chr6 170765307 43 + 172623881 TCAGCCCTCCTGTGATGGAAGGTGGTGGGAACACCAGGTACAC i panTro4.chr6 T 181 C 0 s ponAbe2.chr6 172522530 43 + 174210431 TCAGCCCTCCTGTGATAGAAGGTGGTGGGAACACCAGGTACAC i ponAbe2.chr6 I 61 C 0 s nomLeu3.chr3 156381510 43 + 157873769 TCAGCCCTCCTGTGATGGAAGGTGGTGGGAACACCAGGTACAC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168197789 43 + 169853907 TCAGGCTTCCTGTGATGGAAGGCGGTGGGAATATCAGGTACAC i rheMac3.chr4 C 0 T 170 s macFas5.chr4 169151805 43 - 170955103 TCAGGCCTCCTGTGATGGAAGGCGGTGGTGACACCAGGTACAC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968497 43 + 165299245 TCAGCCCTCCTGTGATGGAGGGCGGTGGTGACACCAGGTACAT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753835 43 + 98384682 TCAGCCCTCCTGTGATGGAAGGTGGTGGGAATATCAGGTACAC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964616 42 + 171630274 TCAGCCCTCCTGGGACGGAGGGTGGTGGGAAGACCC-GTGCAC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I a score=13469.000000 s hg38.chr6_KB021644v2_alt 175960 6 + 185823 GGGGTC s panTro4.chr6 170765350 6 + 172623881 GGGGTC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172522573 6 + 174210431 AGGGTC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381553 6 + 157873769 GGGGTC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169151848 6 - 170955103 GGGGTC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968540 6 + 165299245 GGGGTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753878 6 + 98384682 GGGGTC i chlSab2.chr13 C 0 T 133 s calJac3.chr4 169964658 6 + 171630274 AGTGTC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I e rheMac3.chr4 168197832 170 + 169853907 T a score=1795.000000 s hg38.chr6_KB021644v2_alt 175966 2 + 185823 TG s panTro4.chr6 170765356 2 + 172623881 TG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172522579 2 + 174210431 TG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381559 2 + 157873769 TG i nomLeu3.chr3 C 0 C 0 s papAnu2.chr4 163968546 2 + 165299245 AG i papAnu2.chr4 C 0 T 294 s calJac3.chr4 169964664 2 + 171630274 TG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I e chlSab2.chr13 96753884 133 + 98384682 T e rheMac3.chr4 168197832 170 + 169853907 T e macFas5.chr4 169151854 0 - 170955103 C a score=781.000000 s hg38.chr6_KB021644v2_alt 175968 1 + 185823 G s panTro4.chr6 170765358 1 + 172623881 G i panTro4.chr6 C 0 T 33 s ponAbe2.chr6 172522581 1 + 174210431 G i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381561 1 + 157873769 G i nomLeu3.chr3 C 0 I 59 s macFas5.chr4 169151854 1 - 170955103 A i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968254 1 + 165299245 A i papAnu2.chr4 T 294 C 0 s calJac3.chr4 169964666 1 + 171630274 G i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I e chlSab2.chr13 96753884 133 + 98384682 T e rheMac3.chr4 168197832 170 + 169853907 T a score=16983.000000 s hg38.chr6_KB021644v2_alt 175969 9 + 185823 GGTGTGCAG s ponAbe2.chr6 172522582 9 + 174210431 GGTGTGCAG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381621 9 + 157873769 GCTGTGCAG i nomLeu3.chr3 I 59 C 0 s rheMac3.chr4 168197662 9 + 169853907 GGTGTGCAG i rheMac3.chr4 T 170 C 0 s macFas5.chr4 169151855 9 - 170955103 GGTGTGCAG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968255 9 + 165299245 GGTGTGCAG i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169964667 9 + 171630274 GGTGTGCAG i calJac3.chr4 C 0 I 119 e canFam3.chr1 56232446 73 + 122678785 I e chlSab2.chr13 96753884 133 + 98384682 T e panTro4.chr6 170765359 33 + 172623881 T a score=34680.000000 s hg38.chr6_KB021644v2_alt 175978 19 + 185823 TCAGCTCTCTTGTGATGGA s ponAbe2.chr6 172522591 19 + 174210431 TCAGCCCTCCTGTGATAGA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381630 19 + 157873769 TCAGCCCTCCTGTGATGGA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168197671 19 + 169853907 TCAGCCCTCCTGTGATGGA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169151864 19 - 170955103 TCAGCCCTCCTGTGATGGA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968264 19 + 165299245 TCAGCCCTCCTGTGATGGA i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169964795 19 + 171630274 TGAGCCCTCCTGTGATGGA i calJac3.chr4 I 119 C 0 e canFam3.chr1 56232446 73 + 122678785 I e chlSab2.chr13 96753884 133 + 98384682 T e panTro4.chr6 170765359 33 + 172623881 T a score=23130.000000 s hg38.chr6_KB021644v2_alt 175997 18 + 185823 GTGTGGTGGGAACACCAG s panTro4.chr6 170765326 18 + 172623881 AGGTGGTGGGAACACCAG i panTro4.chr6 T 33 C 0 s ponAbe2.chr6 172522610 18 + 174210431 AGGTGGTGGGAACACCAG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381649 18 + 157873769 GGGCGGTGGGATCACCAG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168197690 18 + 169853907 AGGCGGTGGGAATATCAG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169151883 18 - 170955103 AGGTGGTGGGAATATCAG i macFas5.chr4 C 0 T 47 s papAnu2.chr4 163968283 18 + 165299245 AGGCCGTGGGAATATCAG i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169964814 7 + 171630274 GGACAGT----------- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I e chlSab2.chr13 96753884 133 + 98384682 T a score=4485.000000 s hg38.chr6_KB021644v2_alt 176015 3 + 185823 GTG s panTro4.chr6 170765344 3 + 172623881 GTA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172522628 3 + 174210431 GTG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381667 3 + 157873769 GTA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168197708 3 + 169853907 GTA i rheMac3.chr4 C 0 T 179 s papAnu2.chr4 163968301 3 + 165299245 GTA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753751 3 + 98384682 GTG i chlSab2.chr13 T 133 C 0 e calJac3.chr4 169964821 0 + 171630274 C e canFam3.chr1 56232446 73 + 122678785 I e macFas5.chr4 169151901 47 - 170955103 T a score=18221.000000 s hg38.chr6_KB021644v2_alt 176018 9 + 185823 CACAGGGTC s panTro4.chr6 170765347 9 + 172623881 CACGGGGTC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172522631 9 + 174210431 CACAGGGTC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381670 9 + 157873769 CACAGGGTC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168197532 9 + 169853907 CACAGGGTC i rheMac3.chr4 T 179 C 0 s papAnu2.chr4 163968304 9 + 165299245 CACGGGGTC i papAnu2.chr4 C 0 T 177 s chlSab2.chr13 96753754 9 + 98384682 CACAGGGTC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964821 5 + 171630274 ----GTGTC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I e macFas5.chr4 169151901 47 - 170955103 T a score=2865.000000 s hg38.chr6_KB021644v2_alt 176027 2 + 185823 TG s panTro4.chr6 170765356 2 + 172623881 TG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172522640 2 + 174210431 TG i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168197541 2 + 169853907 TG i rheMac3.chr4 C 0 C 0 s chlSab2.chr13 96753763 2 + 98384682 TG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964826 2 + 171630274 TG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I e papAnu2.chr4 163968313 177 + 165299245 T e nomLeu3.chr3 156381679 0 + 157873769 C e macFas5.chr4 169151901 47 - 170955103 T a score=124048.000000 s hg38.chr6_KB021644v2_alt 176029 52 + 185823 GGGTGTGCACTCAGCCCTCCTGTGATGGAAGG----TGGT-GGGAACACC--AGGTACA s panTro4.chr6 170765358 52 + 172623881 GGGTGTGCAGTCAGCCCTCCTGTGATGGAGCA----TGGT-GGGAACACC--AGGTACA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172522642 52 + 174210431 GGGTGTGCAGTCAGCCCTCCTGTGATAGAAGG----TGGT-GGGAACACC--AGGTACA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381679 53 + 157873769 AGGTGTGCAGTCAGCCCTCCTGTGATGGAGGG----CGGTGGGGAACACC--TGGTTCA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168197543 52 + 169853907 GGGTGTGCAGTCAGGCCTCCTGTGATGGAAGG----CAGT-GGGAATATC--AGGTACA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169151854 52 - 170955103 AGGTGTGCAGTCAGCCCTCCTGTGATGGAAGG----TGGT-GGGAATATC--AGGTACA i macFas5.chr4 T 47 C 0 s papAnu2.chr4 163968136 52 + 165299245 AGGTGTGCAGTCAGCCCTTCTGTGATGGAGGG----CGGT-GGGGACACC--AGGTCCA i papAnu2.chr4 T 177 C 0 s chlSab2.chr13 96753765 53 + 98384682 GGGTGTGCAGTCAGGCCTCCTGTGATGGAGGG----CGGTGGGGAATATC--AGGTACA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964828 58 + 171630274 GGATGGGCAGTGCCCCTTCCTGTGGCGGAGGGAGGATGGT-GGGAGCAGCCAAGGTGCA i calJac3.chr4 C 0 T 168 e canFam3.chr1 56232446 73 + 122678785 I a score=17843.000000 s hg38.chr6_KB021644v2_alt 176081 7 + 185823 CGGGGTC s panTro4.chr6 170765410 7 + 172623881 CGGGGTC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172522694 7 + 174210431 CAGGGTC i ponAbe2.chr6 C 0 I 588 s nomLeu3.chr3 156381732 7 + 157873769 TGGAGTC i nomLeu3.chr3 C 0 I 2 s rheMac3.chr4 168197595 7 + 169853907 TGGGGTC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169151906 7 - 170955103 TGGGGTC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968188 7 + 165299245 TTGGGTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753818 7 + 98384682 CGGGGTC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964718 7 + 171630274 CAGGGTC i calJac3.chr4 T 168 C 0 e canFam3.chr1 56232446 73 + 122678785 I a score=122086.000000 s hg38.chr6_KB021644v2_alt 176088 52 + 185823 AGGTGT---CCCATC-AGCCCTCCTGT----GATGGAAGGTGGTGGGAACACC--AGGTACA s panTro4.chr6 170765417 52 + 172623881 AGGTGT---GCAGTC-AGCCCTCCTGT----GATGGAAGGTGGTGGGAACACC--AGGTACA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172523289 52 + 174210431 GGGTGT---GCAGTC-AGCCCTCCTGT----GATAGAAGGTGGTGGGAACACC--AGGTACA i ponAbe2.chr6 I 588 C 0 s nomLeu3.chr3 156381741 58 + 157873769 GGGTGA---GCAGTG-CCCCTTCCTGTGGTGGATGGAGGATGGTGGAAACACCCAAGGTGCA i nomLeu3.chr3 I 2 T 341 s rheMac3.chr4 168197602 52 + 169853907 AGGTGT---GCAGTC-AGCCCTTCTGT----GATGGAGGGCGGTGGGGACACC--AGGTCCT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169151913 55 - 170955103 AGGTGTGCAGCAGTC-AGGCCTCCTGT----GATGGAAGGCGGTGGGAATATC--AGGTACA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968195 52 + 165299245 AGGTGT---GCAGTC-AGCCCTCCTGT----GATGGAAGGCTGTGGTGACACC--AGGTACA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753825 52 + 98384682 AGGTGT---GCAGTC-AGCCCTCCTGT----GATGGAAGGTGGTGGGAATATC--AGGTACA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964725 53 + 171630274 AGGTGC---ACAGTCTAGCCCTCCTGT----GATGGAGGTTGGTGGGAACACC--AGACACA i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I a score=26465.000000 s hg38.chr6_KB021644v2_alt 176140 15 + 185823 CGGGG--TCAGGTGTGC s panTro4.chr6 170765469 17 + 172623881 CAGGGGCTGGGGTGTGC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172523341 17 + 174210431 CAGGGTCTGGGGTGTGC i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168197654 15 + 169853907 TGGGG--TCAGGTGTGC i rheMac3.chr4 C 0 I 1 s macFas5.chr4 169151968 15 - 170955103 TGGGG--TCAAGTGTGC i macFas5.chr4 C 0 I 1 s papAnu2.chr4 163968247 15 + 165299245 CGGGG--TCAGGTGTGC i papAnu2.chr4 C 0 T 58 s chlSab2.chr13 96753877 15 + 98384682 CGGGG--TCAGGTGTGC i chlSab2.chr13 C 0 T 58 s calJac3.chr4 169964778 15 + 171630274 CAGGG--TCGGGTGTGC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I e nomLeu3.chr3 156381799 341 + 157873769 T a score=-69.000000 s hg38.chr6_KB021644v2_alt 176155 1 + 185823 C s panTro4.chr6 170765486 1 + 172623881 A i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172523358 1 + 174210431 A i ponAbe2.chr6 C 0 C 0 s calJac3.chr4 169964793 1 + 171630274 A i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I e chlSab2.chr13 96753892 58 + 98384682 T e papAnu2.chr4 163968262 58 + 165299245 T e nomLeu3.chr3 156381799 341 + 157873769 T e rheMac3.chr4 168197669 1 + 169853907 I e macFas5.chr4 169151983 1 - 170955103 I a score=18746.000000 s hg38.chr6_KB021644v2_alt 176156 8 + 185823 GTCAGCCC s panTro4.chr6 170765487 8 + 172623881 GTCAGCCC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172523359 8 + 174210431 GTCAGCCC i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168197670 8 + 169853907 GTCAGCCC i rheMac3.chr4 I 1 C 0 s macFas5.chr4 169151984 8 - 170955103 GTCAGGCC i macFas5.chr4 I 1 C 0 s papAnu2.chr4 163968204 8 + 165299245 GTCAGCCC i papAnu2.chr4 T 58 C 0 s chlSab2.chr13 96753834 8 + 98384682 GTCAGCCC i chlSab2.chr13 T 58 C 0 s calJac3.chr4 169964794 8 + 171630274 GTGAGCCC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I e nomLeu3.chr3 156381799 341 + 157873769 T a score=47194.000000 s hg38.chr6_KB021644v2_alt 176164 17 + 185823 TCCTGTGATGGAAGGTG s panTro4.chr6 170765495 17 + 172623881 TCCTGTGATGGAAGGTG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172523367 17 + 174210431 TCCTGTGATAGAAGGTG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381458 17 + 157873769 TCCTGTGATGGAGCATG i nomLeu3.chr3 T 341 C 0 s rheMac3.chr4 168197678 17 + 169853907 TCCTGTGATGGAAGGCG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169151992 17 - 170955103 TCCTGTGATGGAAGGCG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968212 17 + 165299245 TCCTGTGATGGAAGGCT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753842 17 + 98384682 TCCTGTGATGGAAGGTG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964802 17 + 171630274 TCCTGTGATGGAGGACA i calJac3.chr4 C 0 T 238 e canFam3.chr1 56232446 73 + 122678785 I a score=6876.000000 s hg38.chr6_KB021644v2_alt 176181 2 + 185823 GT s panTro4.chr6 170765512 2 + 172623881 GT i panTro4.chr6 C 0 T 156 s ponAbe2.chr6 172523384 2 + 174210431 GT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381475 2 + 157873769 GT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168197695 2 + 169853907 GT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169152009 2 - 170955103 GT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968229 2 + 165299245 GT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753859 2 + 98384682 GT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964581 2 + 171630274 GT i calJac3.chr4 T 238 C 0 e canFam3.chr1 56232446 73 + 122678785 I a score=46397.000000 s hg38.chr6_KB021644v2_alt 176183 23 + 185823 GGGAACACCAGGTACACGGGGTC s ponAbe2.chr6 172523386 23 + 174210431 GGGAACACCAGGTACACAGGGTC i ponAbe2.chr6 C 0 I 2 s nomLeu3.chr3 156381477 23 + 157873769 GGGAGCACCAGGTACACGGGGTC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168197697 23 + 169853907 GGGAATATCAGGTACATGGGGTC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169152011 23 - 170955103 GGGAATATCAGGTACATGGGGTC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968231 23 + 165299245 GGTGACACCAGGTACACGGGGTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753861 23 + 98384682 GGGAATATCAGGTACACGGGGTC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964583 23 + 171630274 GGGAACGCCCCGTGTACAGGGTC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I e panTro4.chr6 170765514 156 + 172623881 T a score=1577.000000 s hg38.chr6_KB021644v2_alt 176206 1 + 185823 A s panTro4.chr6 170765358 1 + 172623881 G i panTro4.chr6 T 156 C 0 s ponAbe2.chr6 172523411 1 + 174210431 G i ponAbe2.chr6 I 2 C 0 s nomLeu3.chr3 156381500 1 + 157873769 A i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168197720 1 + 169853907 A i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169152034 1 - 170955103 A i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968254 1 + 165299245 A i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753884 1 + 98384682 A i chlSab2.chr13 C 0 T 119 s calJac3.chr4 169964606 1 + 171630274 A i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I a score=310963.000000 s hg38.chr6_KB021644v2_alt 176207 111 + 185823 GGTGTGCCGTCAGCCCTCCTGTGATGGAAGGTGGT-GGGAACACCAGGTACACGGGGTC--AGGTGTGCAGTCAGCCCTCCTGTGATGGAAGGTGGTGGGAACACCAGGTACAC s panTro4.chr6 170765359 111 + 172623881 GGTGTGCAGTCAGCCCTCCTGTGATGGAGCATGGT-GGGAACACCAGGTACACGGGGTC--AGGTGTGCAGTCAGCCCTCCTGTGATGGAAGGTGGTGGGAACACCAGGTACAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172523412 113 + 174210431 GGTGTGCAGTCAGCCCTCCTGTGATAGAAGGTGGT-GGGAACACCAGGTACACAGGGTCTGGGGTGTGCAGTCAGCCCTCCTGTGATAGAAGGTGGTGGGAACACCAGGTACAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381501 113 + 157873769 GGTGTGCAGTCAGCCCTCCTGTGATGGAAGGTGGT-GGGAACACCAGGTACACGGGGTCTGGGGTGTGCAGTCAGCCCTCCTGTGATGGAAGGTGGTGGGAACACCAGGTACAT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168197721 111 + 169853907 AGTGTGCAGTCAGGCCTCCTGTGATGGAAGGCGGT-GGGAATATCAGGTACATGGGGTC--AGGTGTGCAGTCAGGCTTCCTGTGATGGAAGGCGGTGGGAATATCAGGTACAC i rheMac3.chr4 C 0 T 220 s macFas5.chr4 169152035 111 - 170955103 GGTGTGCAGTCAGGCCTCCTGTGATGGAAGGCGGT-GGGAATATCAGGTACACGGGGTC--AGGTGTGCAGTCAGCCCTCCTGTGATGGAAGGTGGTGGGAATATCAGGTACAT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968255 108 + 165299245 GGTGTGCAGTCAGCCCTCCTGTGATGGAAGGCCGT-GGGAATATCAGGTACACGGGGTC--AAGTGTGCAGTCAGCCCTCCTGTGATGGAAGGTGGTG---ACACCAGGTACAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753766 112 + 98384682 GGTGTGCAGTCAGGCCTCCTGTGATGGAGGGCGGTGGGGAATATCAGGTACACGGGGTC--AGGTGTGCAGTCAGCCCTCCTGTGATGGAAGGTGGTGGGAATATCAGGTACAC i chlSab2.chr13 T 119 C 0 s calJac3.chr4 169964607 112 + 171630274 GGTGTGCAGTCAGCCCTCCTGGGACGGAGGGTGGT-GGGAAGACCC-GTGCACAGTGTCTGGGGTGTGCAGTCAGCCCTCCTGTGATGGAGGACGGTGAGAACACCAGGCACAC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I a score=9208.000000 s hg38.chr6_KB021644v2_alt 176318 4 + 185823 GGGG s panTro4.chr6 170765470 4 + 172623881 AGGG i panTro4.chr6 C 0 T 116 s ponAbe2.chr6 172523525 4 + 174210431 AGGG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381614 4 + 157873769 GGGG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169152146 4 - 170955103 GGGG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968363 4 + 165299245 GGGG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753878 4 + 98384682 GGGG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964719 4 + 171630274 AGGG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I e rheMac3.chr4 168197832 220 + 169853907 T a score=4011.000000 s hg38.chr6_KB021644v2_alt 176322 2 + 185823 TC s ponAbe2.chr6 172523529 2 + 174210431 TC i ponAbe2.chr6 C 0 I 2 s nomLeu3.chr3 156381618 2 + 157873769 TC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169152150 2 - 170955103 TC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968367 2 + 165299245 TC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753882 2 + 98384682 TC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964723 2 + 171630274 TC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I e rheMac3.chr4 168197832 220 + 169853907 T e panTro4.chr6 170765474 116 + 172623881 T a score=12160.000000 s hg38.chr6_KB021644v2_alt 176324 6 + 185823 AGGTGT s panTro4.chr6 170765358 6 + 172623881 GGGTGT i panTro4.chr6 T 116 C 0 s ponAbe2.chr6 172523533 6 + 174210431 GGGTGT i ponAbe2.chr6 I 2 C 0 s nomLeu3.chr3 156381620 6 + 157873769 AGCTGT i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169152152 6 - 170955103 AGGTGT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968369 6 + 165299245 AGGTGT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753884 6 + 98384682 AGGTGT i chlSab2.chr13 C 0 T 115 s calJac3.chr4 169964725 6 + 171630274 AGGTGC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I e rheMac3.chr4 168197832 220 + 169853907 T a score=4201.000000 s hg38.chr6_KB021644v2_alt 176330 4 + 185823 CCCA s panTro4.chr6 170765364 4 + 172623881 GCAG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172523539 4 + 174210431 GCAG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381626 4 + 157873769 GCAG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169152158 4 - 170955103 GCAG i macFas5.chr4 C 0 I 3 s papAnu2.chr4 163968375 4 + 165299245 GCAG i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169964731 4 + 171630274 ACAG i calJac3.chr4 C 0 T 59 e canFam3.chr1 56232446 73 + 122678785 I e chlSab2.chr13 96753890 115 + 98384682 T e rheMac3.chr4 168197832 220 + 169853907 T a score=21402.000000 s hg38.chr6_KB021644v2_alt 176334 7 + 185823 TCAGCCC s panTro4.chr6 170765368 7 + 172623881 TCAGCCC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172523543 7 + 174210431 TCAGCCC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381630 7 + 157873769 TCAGCCC i nomLeu3.chr3 C 0 T 179 s rheMac3.chr4 168197612 7 + 169853907 TCAGCCC i rheMac3.chr4 T 220 C 0 s macFas5.chr4 169152165 7 - 170955103 TCAGGCC i macFas5.chr4 I 3 C 0 s papAnu2.chr4 163968379 7 + 165299245 TCAGCCC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753775 7 + 98384682 TCAGGCC i chlSab2.chr13 T 115 C 0 s calJac3.chr4 169964676 7 + 171630274 TCAGCCC i calJac3.chr4 T 59 C 0 e canFam3.chr1 56232446 73 + 122678785 I a score=106719.000000 s hg38.chr6_KB021644v2_alt 176341 40 + 185823 TCCTGTGATGGAAGGTGGT-GGGAACACCAGGTACACGGGG s panTro4.chr6 170765375 40 + 172623881 TCCTGTGATGGAGCATGGT-GGGAACACCAGGTACACGGGG i panTro4.chr6 C 0 I 61 s ponAbe2.chr6 172523550 40 + 174210431 TCCTGTGATAGAAGGTGGT-GGGAACACCAGGTACACAGGG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381458 40 + 157873769 TCCTGTGATGGAGCATGGT-GGGAGCACCAGGTACACGGGG i nomLeu3.chr3 T 179 C 0 s rheMac3.chr4 168197619 40 + 169853907 TTCTGTGATGGAGGGCGGT-GGGGACACCAGGTCCTTGGGG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169152172 40 - 170955103 TCCTGTGATGGAAGGCGGT-GGGAATATCAGGTACATGGGG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968386 40 + 165299245 TCCTGTGATGGAAGGCGGT-GGGAATATCAGGTACATGGGG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753782 41 + 98384682 TCCTGTGATGGAGGGCGGTGGGGAATATCAGGTACACGGGG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964683 40 + 171630274 TCCTGTGATGGAGGACGGT-GAGAACACCAGGCACACAGGG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I a score=5076.000000 s hg38.chr6_KB021644v2_alt 176381 2 + 185823 TC s panTro4.chr6 170765476 2 + 172623881 TG i panTro4.chr6 I 61 T 120 s ponAbe2.chr6 172523590 2 + 174210431 TC i ponAbe2.chr6 C 0 I 2 s nomLeu3.chr3 156381498 2 + 157873769 TC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168197659 2 + 169853907 TC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169152212 2 - 170955103 TC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968426 2 + 165299245 TC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753823 2 + 98384682 TC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964723 2 + 171630274 TC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I a score=1577.000000 s hg38.chr6_KB021644v2_alt 176383 1 + 185823 A s panTro4.chr6 170765358 1 + 172623881 G i panTro4.chr6 T 120 C 0 s ponAbe2.chr6 172523594 1 + 174210431 G i ponAbe2.chr6 I 2 C 0 s nomLeu3.chr3 156381500 1 + 157873769 A i nomLeu3.chr3 C 0 I 61 s rheMac3.chr4 168197661 1 + 169853907 A i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169152214 1 - 170955103 A i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968428 1 + 165299245 A i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753825 1 + 98384682 A i chlSab2.chr13 C 0 T 60 s calJac3.chr4 169964725 1 + 171630274 A i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I a score=166817.000000 s hg38.chr6_KB021644v2_alt 176384 59 + 185823 GGTGTGCAGTC-AGCCCTCCTGTGATGGAAGGTGGT-GGGAACACCAGGTACACGGGGTCA s panTro4.chr6 170765359 59 + 172623881 GGTGTGCAGTC-AGCCCTCCTGTGATGGAGCATGGT-GGGAACACCAGGTACACGGGGTCA i panTro4.chr6 C 0 T 59 s ponAbe2.chr6 172523595 59 + 174210431 GGTGTGCAGTC-AGCCCTCCTGTGATAGAAGGTGGT-GGGAACACCAGGTACACAGGGTCT i ponAbe2.chr6 C 0 I 2 s nomLeu3.chr3 156381562 59 + 157873769 GGTGTGCAGTC-AGCCCTCCTGTGATGGAAGGTGGT-GGGAACACCAGGTACATGGGGTCA i nomLeu3.chr3 I 61 C 0 s rheMac3.chr4 168197662 59 + 169853907 GGTGTGCAGTC-AGCCCTCCTGTGATGGAAGGCGGT-GGGAATATCAGGTACATGGGGTCA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169152215 59 - 170955103 AGTGTGCAGTC-AGGCCTCCTGTGATGGAAGGCGGT-GGGAATATCAGGTACATGGGGTCA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968429 59 + 165299245 GGTGTGCAGTC-AGCCTTCCTGTGATGGAAGGTGGT-GGGAATATCAGGTACACGGGGTCA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753766 60 + 98384682 GGTGTGCAGTC-AGGCCTCCTGTGATGGAGGGCGGTGGGGAATATCAGGTACACGGGGTCA i chlSab2.chr13 T 60 C 0 s calJac3.chr4 169964726 60 + 171630274 GGTGCACAGTCTAGCCCTCCTGTGATGGAGGTTGGT-GGGAACACCAGACACACAGGGTCG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I a score=104505.000000 s hg38.chr6_KB021644v2_alt 176443 35 + 185823 GGTGTGCAGTCAGCCCTCCTGTGATGGAAGGTGGT s panTro4.chr6 170765359 35 + 172623881 GGTGTGCAGTCAGCCCTCCTGTGATGGAGCATGGT i panTro4.chr6 T 59 C 0 s ponAbe2.chr6 172523656 35 + 174210431 GGTGTGCAGTCAGCCCTCCTGTGATAGAAGGTGGT i ponAbe2.chr6 I 2 C 0 s nomLeu3.chr3 156381621 35 + 157873769 GCTGTGCAGTCAGCCCTCCTGTGATGGAGGGCGGT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168197721 35 + 169853907 AGTGTGCAGTCAGGCCTCCTGTGATGGAAGGCGGT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169152274 35 - 170955103 GGTGTGCAGTCAGCCCTCCTGTGATGGAAGGTGGT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968488 35 + 165299245 GGTGTGCAGTCAGCCCTCCTGTGATGGAGGGCGGT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753826 35 + 98384682 GGTGTGCAGTCAGCCCTCCTGTGATGGAAGGTGGT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964786 35 + 171630274 GGTGTGCAGTGAGCCCTCCTGTGATGGAGGACAGT i calJac3.chr4 C 0 T 103 e canFam3.chr1 56232446 73 + 122678785 I a score=35202.000000 s hg38.chr6_KB021644v2_alt 176478 16 + 185823 GGGAACACCAGGTACA s panTro4.chr6 170765394 16 + 172623881 GGGAACACCAGGTACA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172523691 16 + 174210431 GGGAACACCAGGTACA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381656 16 + 157873769 GGGATCACCAGGTACA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168197756 16 + 169853907 GGGAATATCAGGTACA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169152309 16 - 170955103 GGGAATATCAGGTACA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968523 16 + 165299245 GGTGACACCAGGTACA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753861 16 + 98384682 GGGAATATCAGGTACA i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169964821 103 + 171630274 T e canFam3.chr1 56232446 73 + 122678785 I a score=46438.000000 s hg38.chr6_KB021644v2_alt 176494 18 + 185823 CGGGGTC--AGGTGT---GCAGT s panTro4.chr6 170765410 18 + 172623881 CGGGGTC--AGGTGT---GCAGT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172523707 20 + 174210431 CAGGGTCTGGGGTGT---GCAGT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381672 18 + 157873769 CAGGGTC--AGGTGT---GCAGT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168197772 18 + 169853907 TGGGGTC--AGGTGT---GCAGT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169152325 18 - 170955103 TGGGGTC--AAGTGT---GCAGT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968539 21 + 165299245 TGGGGTC--AGGTGTGCAGCAGT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753877 18 + 98384682 CGGGGTC--AGGTGT---GCAGT i chlSab2.chr13 C 0 T 59 s calJac3.chr4 169964718 18 + 171630274 CAGGGTC--AGGTGC---ACAGT i calJac3.chr4 T 103 C 0 e canFam3.chr1 56232446 73 + 122678785 I a score=116451.000000 s hg38.chr6_KB021644v2_alt 176512 42 + 185823 -CAGCTCTCCTGTGATGGAAGGTGGT-GGGAACACCAGGTACAC s panTro4.chr6 170765428 42 + 172623881 -CAGCCCTCCTGTGATGGAAGGTGGT-GGGAACACCAGGTACAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172523727 42 + 174210431 -CAGCCCTCCTGTGATAGAAGGTGGT-GGGAACACCAGGTACAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381690 43 + 157873769 -CAGCCCTCCTGTGATGGAGGGCGGTGGGGAACACCTGGTTCAT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168197790 42 + 169853907 -CAGGCTTCCTGTGATGGAAGGCGGT-GGGAATATCAGGTACAC i rheMac3.chr4 C 0 I 20 s macFas5.chr4 169152343 42 - 170955103 -CAGGCCTCCTGTGATGGAAGGTGGT-GGGAATATCAGGTACAT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968560 42 + 165299245 -CAGCCCTCCTGTGATGGAAGGCGGT-GGGAATATCAGGTACAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753836 42 + 98384682 -CAGCCCTCCTGTGATGGAAGGTGGT-GGGAATATCAGGTACAC i chlSab2.chr13 T 59 C 0 s calJac3.chr4 169964736 43 + 171630274 CTAGCCCTCCTGTGATGGAGGTTGGT-GGGAACACCAGACACAC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I a score=808.000000 s hg38.chr6_KB021644v2_alt 176554 1 + 185823 G s panTro4.chr6 170765470 1 + 172623881 A i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172523769 1 + 174210431 A i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381733 1 + 157873769 G i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169152385 1 - 170955103 G i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968602 1 + 165299245 G i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753878 1 + 98384682 G i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964779 1 + 171630274 A i calJac3.chr4 C 0 I 41 e canFam3.chr1 56232446 73 + 122678785 I e rheMac3.chr4 168197832 20 + 169853907 I a score=10020.000000 s hg38.chr6_KB021644v2_alt 176555 5 + 185823 GGGTC s panTro4.chr6 170765471 5 + 172623881 GGGGC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172523770 5 + 174210431 GGGTC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381734 5 + 157873769 GAGTC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169152386 5 - 170955103 GGGTC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968603 5 + 165299245 GGGTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753879 5 + 98384682 GGGTC i chlSab2.chr13 C 0 T 59 s calJac3.chr4 169964821 5 + 171630274 GTGTC i calJac3.chr4 I 41 C 0 e canFam3.chr1 56232446 73 + 122678785 I e rheMac3.chr4 168197832 20 + 169853907 I a score=1910.000000 s hg38.chr6_KB021644v2_alt 176560 2 + 185823 TG s panTro4.chr6 170765476 2 + 172623881 TG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172523775 2 + 174210431 TG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381739 2 + 157873769 TG i nomLeu3.chr3 C 0 C 0 s calJac3.chr4 169964826 2 + 171630274 TG i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I e chlSab2.chr13 96753884 59 + 98384682 T e papAnu2.chr4 163968608 0 + 165299245 C e rheMac3.chr4 168197832 20 + 169853907 I e macFas5.chr4 169152391 0 - 170955103 C a score=808.000000 s hg38.chr6_KB021644v2_alt 176562 1 + 185823 G s panTro4.chr6 170765478 1 + 172623881 G i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172523777 1 + 174210431 G i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381741 1 + 157873769 G i nomLeu3.chr3 C 0 T 62 s macFas5.chr4 169152391 1 - 170955103 A i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968608 1 + 165299245 A i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753825 1 + 98384682 A i chlSab2.chr13 T 59 C 0 s calJac3.chr4 169964828 1 + 171630274 G i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I e rheMac3.chr4 168197832 20 + 169853907 I a score=28203.000000 s hg38.chr6_KB021644v2_alt 176563 13 + 185823 GGTGTGCAGTCAG s panTro4.chr6 170765479 13 + 172623881 GGTGTGCAGTCAG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172523778 13 + 174210431 GGTGTGCAGTCAG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381680 13 + 157873769 GGTGTGCAGTCAG i nomLeu3.chr3 T 62 C 0 s macFas5.chr4 169152392 13 - 170955103 GGTGTGCAGTCAG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968609 13 + 165299245 GGTGTGCAGTCAG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753826 13 + 98384682 GGTGTGCAGTCAG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964829 13 + 171630274 GATGGGCAGTGCC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I e rheMac3.chr4 168197832 20 + 169853907 I a score=47785.000000 s hg38.chr6_KB021644v2_alt 176576 16 + 185823 CCCTCCTGTGATGGAA s panTro4.chr6 170765492 16 + 172623881 CCCTCCTGTGATGGAA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172523791 16 + 174210431 CCCTCCTGTGATAGAA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381693 16 + 157873769 CCCTCCTGTGATGGAG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168197852 16 + 169853907 CCCTCCTGTGATGGAA i rheMac3.chr4 I 20 C 0 s macFas5.chr4 169152405 16 - 170955103 GCCTCCTGTGATGGAA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968622 16 + 165299245 CCCTCCTGTGATGGAA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753839 16 + 98384682 CCCTCCTGTGATGGAA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964842 16 + 171630274 CCTTCCTGTGGCGGAG i calJac3.chr4 C 0 T 95 e canFam3.chr1 56232446 73 + 122678785 I a score=17293.000000 s hg38.chr6_KB021644v2_alt 176592 7 + 185823 GGTGGTG s panTro4.chr6 170765508 7 + 172623881 GGTGGTG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172523807 7 + 174210431 GGTGGTG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381709 7 + 157873769 GGCGGTG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168197868 7 + 169853907 GGTGGTG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169152421 7 - 170955103 GGCGGTG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968638 7 + 165299245 GGCGGTG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753855 7 + 98384682 GGTGGTG i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169964858 95 + 171630274 T e canFam3.chr1 56232446 73 + 122678785 I a score=30895.000000 s hg38.chr6_KB021644v2_alt 176599 14 + 185823 GG-AACACCAGGTGC s panTro4.chr6 170765515 15 + 172623881 GGGAACACCAGGTAC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172523814 14 + 174210431 GG-AACACCAGGTAC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381716 15 + 157873769 GGGAACACCTGGTTC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168197875 14 + 169853907 GG-AATATCAGGTAC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169152428 14 - 170955103 GG-AATATCAGGTAC i macFas5.chr4 C 0 I 1 s papAnu2.chr4 163968645 14 + 165299245 GG-AATATCAGGTAC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753862 14 + 98384682 GG-AATATCAGGTAC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964763 14 + 171630274 GG-AACACCAGACAC i calJac3.chr4 T 95 C 0 e canFam3.chr1 56232446 73 + 122678785 I a score=2548.000000 s hg38.chr6_KB021644v2_alt 176613 1 + 185823 A s panTro4.chr6 170765530 1 + 172623881 A i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172523828 1 + 174210431 A i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381731 1 + 157873769 A i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168197889 1 + 169853907 A i rheMac3.chr4 C 0 C 0 s papAnu2.chr4 163968659 1 + 165299245 A i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753876 1 + 98384682 A i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964777 1 + 171630274 A i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I e macFas5.chr4 169152442 1 - 170955103 I a score=1757.000000 s hg38.chr6_KB021644v2_alt 176614 1 + 185823 C s panTro4.chr6 170765531 1 + 172623881 T i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172523829 1 + 174210431 C i ponAbe2.chr6 C 0 I 1333 s nomLeu3.chr3 156381732 1 + 157873769 T i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168197890 1 + 169853907 C i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169152443 1 - 170955103 C i macFas5.chr4 I 1 C 0 s papAnu2.chr4 163968660 1 + 165299245 C i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753877 1 + 98384682 C i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964778 1 + 171630274 C i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I a score=19180.000000 s hg38.chr6_KB021644v2_alt 176615 6 + 185823 GGGGTC s panTro4.chr6 170765532 6 + 172623881 GGGGTC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172525163 6 + 174210431 GGGGTC i ponAbe2.chr6 I 1333 C 0 s nomLeu3.chr3 156381733 6 + 157873769 GGAGTC i nomLeu3.chr3 C 0 I 3 s rheMac3.chr4 168197891 6 + 169853907 GGGGTC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169152444 6 - 170955103 GGGGTC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968661 6 + 165299245 GGGGTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753878 6 + 98384682 GGGGTC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964779 6 + 171630274 AGGGTC i calJac3.chr4 C 0 C 0 e canFam3.chr1 56232446 73 + 122678785 I a score=2300.000000 s hg38.chr6_KB021644v2_alt 176621 1 + 185823 A s panTro4.chr6 170765538 1 + 172623881 A i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172525169 1 + 174210431 A i ponAbe2.chr6 C 0 C 0 s rheMac3.chr4 168197897 1 + 169853907 A i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169152450 1 - 170955103 A i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968667 1 + 165299245 A i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753884 1 + 98384682 A i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964785 1 + 171630274 G i calJac3.chr4 C 0 C 0 s canFam3.chr1 56232519 1 + 122678785 A i canFam3.chr1 I 73 C 0 e nomLeu3.chr3 156381739 3 + 157873769 I a score=15845.000000 s hg38.chr6_KB021644v2_alt 176622 10 + 185823 GGTGTGCA--GT s panTro4.chr6 170765539 10 + 172623881 GGTGTGCA--GT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172525170 10 + 174210431 GGTATGCA--GT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381742 10 + 157873769 GGTGAGCA--GT i nomLeu3.chr3 I 3 C 0 s rheMac3.chr4 168197898 8 + 169853907 GGTGTGCA---- i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169152451 8 - 170955103 GGTGTGCA---- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968668 8 + 165299245 GGTGTGCA---- i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753885 10 + 98384682 GGTGTGCAGT-- i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964786 10 + 171630274 GGTGTGCA--GT i calJac3.chr4 C 0 C 0 s canFam3.chr1 56232520 8 + 122678785 GATATGCA---- i canFam3.chr1 C 0 C 0 a score=-20487.000000 s hg38.chr6_KB021644v2_alt 176632 18 + 185823 CAGCCC--------------------------------------------------------------TCCTGTGGTGGA s panTro4.chr6 170765549 18 + 172623881 CAGCCC--------------------------------------------------------------TCCTGTGGTGGA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172525180 80 + 174210431 CAGCCCTCCTGTGATGGAGGGTGGTGGGGAACACCTGGTTCATGGAGTCTGGGGTGAGCAGTGCCCCTTCCTGTGGTGGA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381752 18 + 157873769 GCCCCT--------------------------------------------------------------TCCTGTGGTGGA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168197906 2 + 169853907 ---------------------------------------------------------------------------GT--- i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169152459 2 - 170955103 ---------------------------------------------------------------------------GT--- i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968676 2 + 165299245 ---------------------------------------------------------------------------GT--- i papAnu2.chr4 C 0 C 0 s calJac3.chr4 169964796 18 + 171630274 GAGCCC--------------------------------------------------------------TCCTGTGATGGA i calJac3.chr4 C 0 I 44 s canFam3.chr1 56232528 14 + 122678785 ------------------------------------------------------------------CCACCTGTGATAGA i canFam3.chr1 C 0 C 0 e chlSab2.chr13 96753895 0 + 98384682 C a score=-1294.000000 s hg38.chr6_KB021644v2_alt 176650 1 + 185823 -T s panTro4.chr6 170765567 1 + 172623881 -T i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172525260 1 + 174210431 -T i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381770 1 + 157873769 -T i nomLeu3.chr3 C 0 C 0 s canFam3.chr1 56232542 1 + 122678785 G- i canFam3.chr1 C 0 C 0 e calJac3.chr4 169964814 44 + 171630274 I e chlSab2.chr13 96753895 0 + 98384682 C e papAnu2.chr4 163968678 0 + 165299245 C e rheMac3.chr4 168197908 0 + 169853907 C e macFas5.chr4 169152461 0 - 170955103 C a score=6441.000000 s hg38.chr6_KB021644v2_alt 176651 10 + 185823 GGGGGATGGT s panTro4.chr6 170765568 10 + 172623881 GAAGGATGAT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172525261 10 + 174210431 GGAGGATGGT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381771 10 + 157873769 GGAGGATGGT i nomLeu3.chr3 C 0 C 0 s calJac3.chr4 169964858 10 + 171630274 GGAGGATGGT i calJac3.chr4 I 44 C 0 s canFam3.chr1 56232543 5 + 122678785 -GAGGT---- i canFam3.chr1 C 0 C 0 e chlSab2.chr13 96753895 0 + 98384682 C e papAnu2.chr4 163968678 0 + 165299245 C e rheMac3.chr4 168197908 0 + 169853907 C e macFas5.chr4 169152461 0 - 170955103 C a score=3611426.000000 s hg38.chr6_KB021644v2_alt 176661 1278 + 185823 GGGAACACCCAAGGTGCAGAC--TGCCTCGTGTGGTTCCTGAAGTCATGTCTTTTCCTCCCAGTCCCCGATTCTTGGCT-GTGTGTACTGTCAAGGAGGC-AGTGCCTTCTGCTGGCCAAGGGGTCTGGAGTGCATGTTCCTCCTGCTCACTCAGTCGTCCCTCAGCTCTTGTAG-----------CTCTGCAC-----CCCACGGTCTCCATCTGACACCTTGTCCCTTAGAGAAACCCTGCACCATGCTGT-GTGCCGGCTGGCCTCCCTGTGGGTCAGATTCATGGCCCTGGGGACCAGAGGAGTGGGCCTCCCGCCAGTAGCACTAAGGCCACGTGGACGCACAGAGGCTCCTAAGCGATGC-CTGAGGCTCCTCCCGCTGGCTGAGACATGCCGCCCTGTGACCTAGGCCGGGAAGGC---CAAGACACCCCAGCAGCCCAGGCACC---------GCCCACCAGTTCCTCGC--TTT-CCTTCGGCTCACAGGCATGTCCATCCTCTCCA--------------GGAACACACCTGAGC-TCTGTGCCTGGCGGTCTCACTCTTCCTCCTCCC-ATTCATTGTGACAAAAGTGTAAAGATctgtattccaggcgcagtagtacgtgctgtggccatggtttcccccac----gattttgagaaagttactgttgttttcttca---------ttatgcag--aagaagctgagattcagagaagtgaagtgggctgcttaagacctcagacgtagggactgatgggactggaCACAGCATGCTGTTCACCATGACTGTCCTGCACCC--TTCAGAcctcaggagaacccaaggaggcaggtgcggctcttaagcacgtgctgctgacagggacaccgagccacagaggaa-------------caaagtcacccacgggacagcaacaga-ctgggaggcatcgggtgaacccagcagggcagctcctgaatctgcccct-aaactaGGGGCTGG--------C--------GCCTGTGGTCATTGCCGCCCACCCCA--CAAAtgtttcggtcaat-agttttactggcacacagccacaggcattcactccacatagacattgtctgtagctgcttgcaaagctgtagccgctgagttgaataattgcaagcaagacc---------gcaaagcctaaaatacata-tt-ttggtcctttaaaggaaaagtgtgctgacccctgGTCCAAAGCACCAGACTGTACTGCTCCCGATATGCAGCAGGCCTTGACTGAGGACAG-AGTATTTGTATCTACACTGTGGAAGGATATCTGAGGTCCTCT-TGAAAAGCTCAATGTCCTACT---GAGCATGGGCAGCAACACCTTCAC---TGAGGGGTGAGAGCTGG s panTro4.chr6 170765578 1277 + 172623881 GGGAACACCCAAGGTGCAGAC--TGCCTCATGTGGTTCCTGAAGTCATGTCTTTTCCTCCCAGTCCCCGATTCTTGGCT-GTGTGTACTGTCAAGGAGGC-AGTGCCTTCTGCTGGCCAAGGGGTCTGGAGTGCATGTTCCTCCTGCTCACTCAGTCCTCCCTCAGCTCTTGCAG-----------CTCTGCAC-----CCCACGGTCTCCATCTGACACCTTGTCCCTTAGAGAAACCCTGCACCACGCTGT-GTGCCGGCTGGCCACCCTGTGGGTCAGATTCACGGCCCTGGGGACCAGAGGAGTGGGCCTCCCGCCAGTAGCACTAAGTCCACATGGATGCACAGAGGCTCCTAAGCGATGC-CTGAGCCTCCTCCCGCTGGCTGAGACATGCCGCCCTGTGACCTAGGCCAGGAAGGC---CAAGACACCCCAGCAGCCCAGGCACC---------ACCCACCAGTTCCTCGC--TTT-CCTTAGGCTCACAGGCATGTCCATCCTCTCCA--------------GGAACACACCTGAGC-TCTGTGCCTGGCGGTCTCACTCCTCCTCCTCCC-ATTCGTTGTGACGAAAGTGTAAAGATctgtattccaggcgcagtggtacgtgctgtggccatggtttcccc-ac----gatgttgagaaagttactgttgttttcttca---------ttatgcag--aagaagctgagattcagagaagtgaagtgggctgcttaagacctcagacgtagggactgatgggactggaCACAGCATGCTGTTCACCACGACTGTCCTGCACCC--TTCAGAcctcaggagaacccgaggaggcaggtgtggctcttaagcacgttctgctgacagggacaccgagccacagaggaa-------------caaagtcacccacgggacagcaacaga-ctgggaggcatcgggtgaacccagcagggcagctcctgaatctgcccct-aaactaGGGGCTGG--------C--------GCCTGTGGTCATTGCCGCTCACCCCA--CAAAtgtttctgtcaat-agttttactggcacacagccacaggcattcactccacatagacattgtctgtagctgctttcaaagctgtagcagctgagttgaataattgcaaccaagacc---------gcaaagcctaaaatacata-tt-ttggtccttaaaaggaaacgtgtgctgacccctgGCCCAAAGCACCAGACTGTACTGCTCCCGCTATGCGGCAAGCTTTGACTGCGGACAG-AGTATTTTTAGCTACACTGTGGAAGGATATCTGAGGTCCTCT-TGAAAAGCTCAATGTCCTACT---GAGCATGGGCAGCAACACCTTCAC---TGAGGGGTGAGGGCTGG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172525271 1272 + 174210431 AGGAACACCCAAGGTGCAGACTGTGCCTCGTGTGGTTCCTGAAGTGATGTCTTTTCCTCCCAGTCCCCGATTCTCAGCT-GTGTGTGTTGTCAAGGAGTC-AGTGCCTTCTGCTGGCCAAGGGGTCTGGAGTGCATGTTCCTCCTGCTCACTCAGTCCTCCCTCAGCTCTTGCAG-----------CTCTGCAC-----CCCACGGTCTCTGTCTGACACCTTGTCCCTTAGAGAAACCCTGCACCATGCTGT-GTGCCGGCTGGCCTCTCTGTGGCTCAGATGCATGGCGCTGGGGACCAGAGGAGTGTGCCTCCTGCCAGTAGCACTAAAGCCACGTGGACACACAGAGGCTCCTAAGTGATGC-TTGAGCCTCCTCCCGCTGGCTGAGACATGCCGCCCTGTGACCTAGGTCGGGAAGGC---CAAGACACCCCAGCAGCCCACGCACC---------ACCCACCAGTTCCTCGC--TTT-CCCTCAGCTCACAGGCATGTCCGTCCTCTCCA--------------GGAACACACCTGAGC-TGTGTGTCTGGCGGTCTCACTCCTCCTCCTCCC-ATTCGTGGTGACGACAGTGTAAAGATCTGTGTTCCAGGCACAGTAGTAGGTGCGGTGGCTATGGTTtcccc-ac----aattttgagaaagttactgttgttttcttca---------ttatgcag--aagaagctgagattcagagaagtgaagtcagctgcttaagacctcaGGTGTAAGGACTGATGGGACTGGACACAGCACGCTGTTCACCACAACTGGCCTGCACCC--TTCAGACCTCAGGAGAACCCAAGGAGGCAGGTGCGGCTCTTAAGCACGTTCTGCTGACAGGGACACGGAGCTACAGAGGAA-------------CAAAGTCGCCCACAGGACAGCGACAGG-CTGGGAGGCATCGGGTGAACCCAGCAGGGCAGCTCCCGAATCTGCCCCT-AAACTAGGGGCTGG--------C--------GCCCGTGGTCGTTGCAGCCCACCCCA--CAGATATTTCTGTCGAC-agttttact-gcacacagccacaggcattcactccacat----attgtctgtagctgctatcaaagctgtagcagctgagttgaataattgcaaccaagacc---------gcaaagcctaaaatacata-tt-tcggtcctttaaaggaaaagtgtgctgaccc--GGTCCAAAGCACCAGGTTGTACTGCTCCCGCTACGCGGCAGGCCTTGACCGCGGACAG-AGTATTTTTATCTACACTGTGGAAAGATATCTGAGGTCCTCT-CGAAAAGCTCAGTGCCCTACT---GAACATGGGCAGCAACACCTTCAC---TGAGGGGTGACAGCTGG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156381781 1293 + 157873769 GGAAACACCCAAGGTGCAGACTCTGCCTCGTGTGGTTCCTGAAGTGATGTCTTTTCCTCCCAGTCCCCGATTCTTAGCT-GTGTGTGCTGTCGAGGAGGC-AGTGCCTTCTGCTGGCCAAGGGGTCTGGAGTGCACGTT-CTCCTGCTCACTCAGTCCTCCCTCAGCTCTTGCAG-----------CTCTGCAC-----CCCACAGTCTCCATCCGACACCTCGTCCCTTAGAGAAACCCTGCATCACGCTGT-GTGCCGGCTGGCCTTTCTGTGGGTCAGATCCAGGGCCCTGGGGACCAGAGGAGTGTGCCTCCCACCAGTAGCACTAAGGCCACATGGACGCACAGAGGCTCCTAAGCGATGC-CTAAGCCTCCTCCCGCTGGCTGAGACATGCCGCCCTGTGACCTAGGCCGGGAAGGC---CAAGACACCCCAGCAGCCCATACAACCG-------CCCCACCAGTTCCTCGC--TTT-CCCTCAGCTCACAGGCATGTCCGTCCTCTCCG--------------GGAACACACCTGAGC-TCTGTGCCCGGCGGTCTCACTCCTCCTCCTCCC-ATTCTTTGTGACGAGAGTGTAAAGATctgtattccaggcacagtagtaggtgctgtggctatggtttcccc-ac----aattttgagaaagttactgttgtttgcctca---------ttatgcag--aagaagctgagattcagagaagtgaagtgagctgcttaagacctcaggcgtagggactgatgggactggaCACAGCACGCTGTTCACCACAACTGTCCTGCACCC--TTCAGAcctcaggagaacccaaggaagcaggtgcagctcttaagcacgttctgccaacagggacaccgagccacagaggaacaaaggaactcgccaaagtcacccacgggacagcgacaga-ctgggaggcatcgggtgaacccagcagggcagctcccgaatctgcccct-aaactaGGGGCTGG--------T--------GCCTGTGGTCATTGCAGCCCACCCCA--CAAACgtttctgtcaat-agttttactggctcacagccacaggcattcacttcacatagacattgtctgtagctgctttcaaagctgtagcaactgagttgaataattgcaaccaagacc---------gcaaagcctaaaatacata-tt-ttggccctttaaaggaaaaatacgctgacccctgGTCTAAAGCACCAGATTGTGCTGCGCCCACTATGAGGCAAGCCTTGACCACGGACAG-AGTATTTTTATCTACACTGTGGAAGGATATCTGAGGTCCTCT-TGAAAAGCTCAGTGTCCTACT---GAGCATGTGTAGCAACATCTTCGC---TGAGGGGTGAGAGCTGG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168197908 1298 + 169853907 AGGAACACCCAAAGCACAAGCTCTGCCTGGTGTGGTTCGTGAAGCGGTGCCTTTTCCTCCCAGTGCCTGATTCTCAGCT-GTGTGTGCTGTCAAGGAGGC-AGTGCCTTCTGCTGGCCAAGGGGTGTGGAGTGCATGTTCTTCTTGCTCACTCAGTCCTCCCTCAGCTTTTGCAG-----------TTCTGCAC-----CCCACGGTCTCCATCTGACACCTTGTCCCTTAGAGAAACCCTGCACCATGCTGT-GTGCCGGCTCACCTCTCTGTGGGTCAGATCCATGGCCCTGGGGACCAGAGCAGTGAGGCTCCCGCTAGTAGCACTAAGGCCACGTGGATGCACAGAGGCTCCTAAGCGATGC-CTGAGCCTCCTCCCGCTGGCTGAGACATGCCACCCTGTGACCTAGGCCAGGAAGGC---CAAGACACCCCAGCAGCCCACACCCC-A-------CCCCACCAGTTCCTTGC--TTT-CCCTCAGCTCACAGGCATGTCCATCCTCTCCA--------------GGAACACACCTGAGC-TCTGTGCCCTGAGGTCTCACTCCTCCTCCCCCCTATTCTTTGTGACTAGAGTGTAAAGATctgtattccaggcacagtagtaggtgttgtagctatggtttcccc-ac----aattttgggaaagttactgttgttttcttca---------ttacgcag--aagaagctgagattcagagaagtgaagggagctgcttaagaccccaGGTGTAGGGACTGACGGGACTGGACACAGCAAGCTGTTCACCATGACTGTCCTGCGtcc--ttcagacctcaggagaacctgaggaggcaggtaccgctcttaagcacgttctgccgccaaggacaccgagccacagaggaataaaggaactcgccaaagtcacccacgggacagcggcagacctgggaggcatcgggtgaacccagcagggcaggtcctgaatctgccctt-aaactaGGGGCTGG--------C--------GCCTGTGATCATTGCAGCCCACCCCA--CAAAtgtttctgtcaat-agttttgctggcacatagccacaggcatccactccacgtagacattgtctgtagctgctttcaaagctgtagcagctgagttgaatcatcgcaaccaagacc---------gcaaagcctaaaatacata-tt-ttggcccttgacaggaaaagtgtgctgacccctgGTCTAAAGCACCAGATTGTACTGCTCCCGCTGCGTGGCAGGCCTTGACCACGGACAG-AGTATTTTTATCTACACGGTGGAAGGATATCTGAGGTCCTGT-TGAAAAGCTCAATGTTCTACA---GCGCATGCACAGCAAGGCCTCCACTGATGAGGGGTGAGAGCTGG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169152461 1298 - 170955103 AGGAACACCCAAAGCACAAGCTCTGCCTCGTGTGGTTCGTGAAGCGGTGCCTTTTCCTCCCAGTGCCTGATTCTCAGCT-GTGTGTGCTGTCAAGGAGGC-AGTGCCTTCTGCTGGCCAAGGGGTGTGGAGTGCATGTTCTTCTTGCTCACTCAGTCCTCCCTCAGCTTTTGCAG-----------CTCTGCAC-----CCCACGGTCTCCATCTGACACCTTGTCCCTTAGAGAAACCCTGCACCATGCTGT-GTGCCGGCTCACCTCTCTGTGGGTCAGATCCATGGCCCTGGGGACCAGAGGGGTGAGGCTCCCGCTAGTAGCACTAAGGCCACGTGGACGCACAGAGGCTCCTAAGCGATGC-CTGAGCCTCCTCCCGCTGGCTGAGACATGCCACCCTGTGACCTAGGCCAGGAAGGC---CAAGAcaccccagcagcccacacccc-a-------ccccaccAGTTCCTTGC--TTT-CCCTCAGCTCACAGGCATGTCCATCCTCTCCA--------------GGAACACACCTGAGC-TCTGTGCCCTGAGGTCTCACTCCTCCTCCCCCCTATTCTTTGTGACTAGAGTGTAAAGATctgtattccaggcacagtagtaggtgttgtagctatggtttcccc-ac----aattttgggaaagttactgttgttttcttca---------ttacgcag--aagaagctgagattcagagaagtgaagggagctgcttaagaccccaggtgtagggactgacgggactggaCACAGCAAGCTGTTCACCATGACTGTCCTGCGtcc--ttcagacctcaggagaacctgaggaggcaggtgccgctcttaagcacgttctgccgccaaggacaccgagccacagaggaataaaggaactcgccaaagtcacccacgggacagcggcagacctgggaggcatcgggtgaacccagcagggcaggtcctgaatctgccctt-aaACTAGGGGCTGG--------C--------GCCTGTGATCATTGCAGCCCACCCCA--CAAAtgtttctgtcaat-agttttgctggcacatagccacaggcatccactccacgtagacattgtctgtagctgctttcaaagctgtagcagctgagttgaatcatcgcaaccaagacc---------gcaaagcctaaaatacata-tt-ttggccctttacaggaaaagtgcgctgacccctgGTCTAAAGCACCAGATTGTACTGCTCCCGCTGCGTGGCAGGCCTTGACCACGGACAG-AGTATTTTTATCTACACGGTGGAAGGATATCTGAGGTCCTGT-TGAAAAGCTCAATGTTCTACT---GCGCATGCACAGCAAGGCCTCCACTGATGAGGGGTGAGAGCTGG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163968678 1290 + 165299245 AGGAACACCCAAAGCACAAGCTCTGCCTCGTGTGGTTCGTGAAGCGGTGCCTTTTCCTCCCAGTGCCTGATTCTCAGCT-GTGTGTGCTGTCAAGGAGGC-AGTGCCTTCTGCTGGCCAAGGGGTGTGGAGTGCATGTTCTTCTTGCTCACTCAGTCCTCCCTCAGCTTTTGCAG-----------CTCTGCAC-----CCCACGGTCTCCATCTGACACCTTGTCCCTTAGAGAAACCCTGCACCATGCTGT-GTGCCGGCTCACCTCTCTGTGGGTCAGATCCATGGCCCTGGGGACCAGAGGGGTGAGGCTCCCGCTAGTAGCACTAAGGCCACGTGGACGCACAGAGGCTCCTAAGCGATGC-CTGAGCCTCCTCCCGCTGGCTGAGACATGCCACCCTGTGACCTAGGCCAGGAAGGC---CAAGACACCCCAGCAGCCCACACACC-A-------CCCCACCAGTTCCTTGC--TTT-CCCTCAGCTCACAGGCATGTCCATCCTCTCCA--------------GGAACACATCTGAGC-TCTGTGCCCTGAGGTCCCACTCCTCCTCCCCCCTATTCTTTGTGACTGGAGTGTAAAGATCTGTATTCCAGGCAC---AGTGGGTGTTGTAGCTATGGTTTCCCC-AC----AATTTTGAGAAAGTTACTGTTGTTTTCTTCA---------TTACGCAG--AAGAAGTTGAGATTCAGAGAAGTGAAGGGAGCTGCTTAAGACCCCA-GTGTAGGGACTGACGGGACTGGACACAGCCAGCTGTTCACCATGACTGTCCTGAGCCC--TTCAGACCTCAGGAGAACCTGAGGAGGCAGGTGCCGCTCTTAAGCACGTTCTGCCGCCAAGGACACCGAGCCACAGAGGAATAAAGGAACTCGCCAAAGTCACCCACGGGACAGCGGCAGACCTGGGAGGCATCGGGTGAACCCAGCAGGGCAGGTCCTGAATCTGCCCCT-AAACTAGGGGCTGG--------T--------GCCTGTGGTCATTGCAGCGCACCCCA--CAAATGTTTCTGACAGT-AGTTTTGCTGGCACATAGCCACAGGCATCCACTCCACGTACACATTGTCTGTAGCTGCTTTCAAAGCTGTAGCAGCTGAGTGGAATCATCGCAACCAAGACC---------GCAAAgcctaaaatacata-tt-ttggccctttacaggaaaagtgtgCTGACCCCTGGTCTAAAGCACCAGATTGTACTGCTCCCGCTGTGTGGCAGGCCTTGACCACGGACAG-AGTA-TTTTATCTACACGGTGGAAGGATCTCTGAGGTCCTCT-GGAAACGCTCGATGTTCTACT---GCGCATGCGCAGCGAGACCTTCAC---TGAGGGGTGAGAGCTGG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96753895 1294 + 98384682 AGGAACACCCAAAGTGCAGGCTCTGCCTCGTGTGGTTCGCGAAGCGGTGCCTTTTCCTCCCAGTGCCTGATTCTCAGCT-GTCTGTGCTGTCAAGGAGGC-AGTGCCTTCTGCTGGCCAAGGGGTGTGGAGTGCATGTTTCTCTTGCTCACTCAGTCCTCCCTCAGCTTTTGCAG-----------CTGTGCA------CCCACGGTCTCCATCTGACACCTTGTCCCTTAGAGAAACCCTTCACCATGCTGT-CTGCCGGCTCACCTCTCTGTGGGTCAGATCCATGGCCCTGGGGACCAGAGGGGTGAGGCTCCCGCCAGTAGCACTAAGGCCACGTGGACGTACAGAGGCTCCTACGCGATGC-CTGAGCCTCCTCCCGCTGGCTGAGACATGCCACCCTGTGACCTAGGCCAGGAAGGC---CAAGAcaccccagcagcccacacccc-a-------ccccaccAGTTCCTTGC--TTT-CCCTCAGCTCACAGGCATGTCCATCCTCTCCA--------------GGAACACATCTGAGC-TCTGTGCCCTGAGGTCTCACTCCTCCTCCCCGCTACTCTTTGTGACTAGAGTGTAAAGATctgtattccaggcacagtagtaggtgttgtagctatggtttcccc-ac----aattttgagaaagttactgttgttttcttca---------ttatgcag--aaggagctgagattcagagaagtgaagggagctgcttaagaccccagGTGTAGGGACTGACGCGACTGGACACAGCAAGCTGTTCACCATGACTGTCCTGCGCCC--TTCAGACCTCAGGAGAACCTGAGGAGGCAGGTGCCGCTCTTAAGCACGTTCTGCCGCCAAggacaccgagccacagaggaataaaggaactcgccaaagtcacccacgggacagcggcagacctgggaGGCATCGGGTGAACCCAGCAGGGCAGGTCCTGAACCTGCCCTT-AAACTAGGGGCTGG--------T--------GCCTGTGGTCATTGCAGCCCACCCCA--CAAAtgtttctgtcaat-agttttgctggcctatagccacaggcatccactccacgtagacatggtctgtagctgctttcaaagctgtagccgctgagtggaatcattgcaacgaagacc---------gcaaagcctaaaatacata-tt-ttggccctttacaggaaaagtgtgctggcccctgCTCTAAAGCACCAGATTGTACTGCTTCTGTTGTGTGGCAGGCCTTGAGCACGGACAG-AGTATTTTTATCTACACGGTGGAAGGATATCTGAGGTCCTCT-CGAAAAGCTCAATGTCCTACT---GCGCATGCGCAGCGAGACCTTCAC---TGAGGGGTGAGCGCTGG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964868 1243 + 171630274 GGGAGCAGCCAAGGTGCAGGCTCTGC----------------AGCAACACCTTTTCCTCCC-GTGCCTGA--CTCGGCT-GTGTG--CTGTCAGGGAGGC-AGTACCTTCTGCTGGGCGAGGGGTCTGGAGTGCATGCTCCTCCCACTCACTGAGTTCTCCCTCACCTCCTGCCA-----------CTCTGCAC-----CCCACGGTCTCCATCTGACACCTTGTCCCTGAGAGAAACCCTGCGGCACACTGT-GTGCAAGCTCATCTCTCTGTGGGTCACATCCACGGCCCGGGGCACCAGAGGAGTGTGTCTCCCGCTGGCATCGCCTAGGCGACATGGGCGCACAGAGGCTCCTAAGCGATGT-CCGAGCCTCCCCTCGCTGGCTGAGACATGCCGCCCCATGACCTGGGCCAGGAAGGA---CAAGACAGCCCAGCAGCCCATGCACT-G-------CCCCACCCGGCTCCAGT--TTTCCCCTCAGCTCACACACAGGTGAATCCTCTCCA--------------GG-ACACACTTGAGC-TCTGTGCCCTGTGGCCTCGCCCCTCCTCCTCCC-ATTCTTTGTGACGAGAGTGCGAAGATCCGCATCCCAGGCACAGTAGTAGGTGCTGTAGTTAT--TTTCTtc-a------------------------ttatctccatta---------ttcaggag--aagaagctgagattcagagaagagaagtgacctgcttaagatcccgggcctaggaagcgatgagctgggacACAGCACGCTGTTCACCGCGACGATCCTGTCCCC--TTCAGAcctcatgagaac---aggaggcaggtgcggctcctaagcacgttgtgccaacagggacgccaagccacagaggaacaaaggaactcgccagagtcacccactggatagcagcagagctgggacacagcaggtgaacacggcagggtagctcccgaatctgctgtt-aaccT-ggggccggtgtacagcc--------gcctgtggccactgcagcccacccca--catgtgtttctgtcagt-gcttttcccggc--acagccacaggcgttcatgccacagggacgttgtctgtgcctgccttcacaggggtagcagctgagttgaataattgcaaccaagacc---------acaaagcctaagacatatactc-ctggcccttcacaggaga-gtgtgctgaccc-TGCTCTAA---ACCAGGCAG--CTGCTCCCGTTCCATGGCAGGC-TTGACCACGAGCAC-ACTG-TTTTGCTTACAC--TGGACAGATGTCTGACGTGCTCT-TGAAAAGCTCAAGGTCCTGGG---GAAGATGTGCAGCAGCACCTTCAC---AGAGGGGTGAGCGCTGG i calJac3.chr4 C 0 I 566 s canFam3.chr1 56232548 1276 + 122678785 GGAGGCCTCCCAGGTGCGCCCTCTGCTTC-------TCATGCAGTAGCTTCTTCATCT-CTGTTGTCTAGTGCTCTGCTCGCATTTGGTATGAAAGCGGTGGGTGCCTTCTTTTAG-CAGGAGGCAGATAGTG-GTGTT-----TGCTGACTCCATCCTCCTTCAGCTCCTACTGGTCATATATCCTTCTGCCTTTCTGCCTGTGGTCTCCACCCAACACCTTGGCTCAGCAAGAATCTACCAGAGACGCCATGGGGCCAGCTCATCT---TGTGGG---GACACACGGTTATTGGCAGGAGAGG-TTATATCTCTTGACTATAGTGTCACAGCCACATGGCATCAGAGAGACTTGTGAGTGCCAAGCTAAGTGTCCTCCTGTTGAGCAGGACACACTGCCTTTTAA-CTGGGCTAGAATGGCTCTCAAAGC-CCCTGGTGGGTCATAAATC-ATCTACTTCCCCACCCTATTCTGATTGTTT-CCCTAAACTAGCACTCACATATGTCCTCTCCACATCAGAAGAGACCTGAACACACATGACCTTCCCTGCCATGT--TCCCTCTCTTCTATTCACC-ATCTTTCATGACAGCAACCACAGGATctctgtaccaggtatggaattaaatacttcaatttgtttttcttc-acaacaaactctgagatagtgagtgctgttatctacattttctcagttatacagttgaggaaacaggatactaagaaattacagtgcctgtttatgatcttagacctagggagtaacTACCC-------------CTAGTCACTAC-CCCACTCTGCCCCCCATTCAGACCTCATGAGGACATA--GAGACACGGTCAGTGGTGGAGCACAGCTTACAGACAGAGTC-------------------------CTGCCCATGGTCACCCCT----CACTGATGGTGCTGGGAT-------------------GGGTAGCTCCAGAATCCATCCTCGAGACTagtggttgg--------cacactgcagtccttgggcattgaggcccactttggccaaggattcttgttaataagttttattgtggtgt-------gccaccccttccttat--gtgttgtctatggctgctttc-cagctactgcagcagaattgagtagatgcaaccaaaaccatatggcttgcaaagcctataatacata-ttcctgcccctttacag--aaagtttgctgaccccCA-TCTAAGCCATCAGATCACACTTCTACCACCATGCTAAGGGGTGGG-----GGACAGAAATGTCTTTCTTTATGCTACAGGAAGGTGTCTGGGGTCTTCTCTGCACAGCATGCTTTCTTGCTAGAGAGGATGCA-AGTGCCCCTTTTGC---TTTGGAGCAATAACTGT i canFam3.chr1 C 0 C 0 a score=416047.000000 s hg38.chr6_KB021644v2_alt 177939 137 + 185823 AGTGGTGACTGAACCTCTGGGGTGACGG-CAGAGGCT--GTCTGAGCTGTATATCCAGATGCACAGTTTTAACACCTGCAAGAATGCAATCTGCATCACAGCTGCCCAGGCCTG-GGTCCTGCTGCActtccacttccacg s panTro4.chr6 170766855 137 + 172623881 AGTGGTGACTGAACCTCTGGGGTGACGG-CAGAGGCT--GTCTAAGCTGTATATCCCGATGCACGGTTTTAACACCTGCAAGAATGCAATCTGCATCACAGCTGCCCAGGCCTG-GGTCCTGCTGCActtccacttccacg i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172526543 137 + 174210431 AGTCGTGACTGAACCTCTGGGGTGACGG-CAGAGGCC--GTCTAAGCTGTATATCCAGATGCACAGTTTTAACACCTGCAAGAACGCAATCTGCATCACAGCTGCCGAGGCCTG-GGTCCTGCCACACTTCCACTTCCACG i ponAbe2.chr6 C 0 I 118 s nomLeu3.chr3 156383074 137 + 157873769 AGTCGTGACTGAACCTCTGGGGTGACAG-CAGAGGCC--GTCTAAGCTGTATATCCAGATGCACAGTTTTAACACCTGCAAGAATGCAATCTGCATCACAGCTGCCCAGGCCTG-GATGCTGCTGCACTTCCACTTCCACG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168199206 137 + 169853907 AGTCGAGACTGCACCTCTGGGGTGACGG-CAGAGGCC--GTCTAAGCTGTATATCCAGATGCACAGTTTTAACACCTGCAAGAACGCAATCTCCATCACAGCTGCCCAGGCCTG-GGTCCCGCTGCActtccgcttccagg i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169153759 137 - 170955103 AGTCGAGACTGCACCTCTGGGGTGACGG-CAGAGGCC--GTCTAAGCTGTATATCCAGATGCACAGTTTTAACACCTGCAAGAACGCAATCTCCATCACAGCTGCCCAGGCCTG-GGTCCCGCTGCACTTGcgcttccagg i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163969968 137 + 165299245 AGTAGGGACTGCACCTCTGGGGTGACGG-CAGAGGCC--GTCTAAGCTGTATATCCAGATGCACAGTTTTAACACCTGCAAGAACGCAATCTCCATCACAGCTGCCCAGGCCTG-GGTCCCGCTGCACTTCCGCTTCCAGG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96755189 137 + 98384682 AGTCGAGACTGCACATCTGGGGTGACGG-CAGAGGCC--GTCTAAGCTGTATATCCAGATGCACAGTTTTAACACCTGCAAGAACGCAATCTCCATCACAGCTGCCCAGGCCTG-GGTCCCGCTGCActtccgcttccagg i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169966677 137 + 171630274 AGTTGTGGCTGAAGTTCTGGGGGGGTGG-CAGAGGCT--GTCTAAGGGGTACATCCAGATGCACAGTTTTAGCACCTGCAAGATCACAGTCTCCATCGGAGCTGCCCAGGCCTG-GGTGCTGCTGCACTTTCGCTTCTGAG i calJac3.chr4 I 566 C 0 s canFam3.chr1 56233824 136 + 122678785 TGCAGTGATTGGATTTCCAGGTGGAAGACCAGTAGTTTAGATTTAGGGTTATGTTCA-ATGTAGGGCTCTAACATTTGCA----TGCAGTCTCTGTACCAACTATCTCCACCTTCGCTCATGCAGCACTTCTGCTCCCACA i canFam3.chr1 C 0 C 0 a score=889641.000000 s hg38.chr6_KB021644v2_alt 178076 311 + 185823 agagacatgcaggggccagctggggctggacaaggggagatgggtggatgaca-------------------------------------------------------g-acagtgctctccactgacagtcctctacccctgaccacctagacccactgactggca----gttatcactcctgcttttatttcctttgggataagttctttcccaggaggctcctagattctttttcaaacaagattttagcaggcgcctcccatcaatctttcagatacatttggatgtgtatgag-cccagctgaggcttgagtgaagacggccactacCCTGCACGTCCT--AGCACCAGAGACTTATGTCAGAGCTCCT s panTro4.chr6 170766992 310 + 172623881 agaggcatgcaggggccagctggggctggacaaggggagatgggcagatgaca-------------------------------------------------------g-acagtgctctccactgacagtcctccacccctgaccacctagacccactgactggca----gttatcactc-tgcttttatttcctttgggataagttctttcccaggaggctcctagattctttttcaaacaagattttagcagacgcctcccatcaatctttcagatacatttggatgtgtacgag-cccagctgaggctcgagtgaagacggccactacCCTGCACGTCCC--AGTACCGGAGACTTATGTCAGAGCTCCT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172526798 311 + 174210431 AGAGGCACGCAGGGGccagctggggctggacaaggggagacggacggatgacg-------------------------------------------------------g-acagcgctctccactgacaatcctccacccctgaccacctagacccactgactggcc----gttatcactcctgcttttatttcctttgggataagttctttcccaggaggctcctagattctttttcaagcaagattttagcaggtgcctcccatcaatctttcagatgcattcggatgtggatgag-cctagcagaggctcgagttaagacagccactacCCTGCACGTCCC--AGTGCCAGAGACTTATGTCAGAGCTCCT i ponAbe2.chr6 I 118 C 0 s nomLeu3.chr3 156383211 365 + 157873769 AGAGGCATGCAGGGGCCAGCTGGGGCTGGACAAGGGGAGACAGACACATGACAGACACCAGAGGCATGCAGGGGccagctggggctggagaaggggagatgggcagatg-acagcgttctccactgacaatcctccacccctgaccacctagacccactgactggca----gttatcactcctgcttttatttcctttgggataagttctttcccaggaggctcctagattctttttcaagcaagattttagcaggcgcctcccatcgatc-ttcagatacatttggatgtgtatgag-cccagctggagctggagttaagatggccactacCCTGCATGTCCT--AGCACCAGAGACTTATGTCAGAGCTCCT i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168199343 295 + 169853907 agaggcatgcaggagccagctggggctggccaaggggagacgggcaggagaca-------------------------------------------------------g-acagcgctcgccactgacgatgctccacccctgaccacctagacccctcgactggca----gttatcactcctgctgttatttcctttgggatacgttctttcccaggaggctcctagattctttttcaagcaagattctagcaggcgcctcccatcaatctttcagatacatttggatgtgtatgac-cccagctggggctcg----------------aCCCTGCACGTCCT--AGCACCAGAGACTTATGTCAGAGCTCCT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169153896 294 - 170955103 agaggcatgcaggagccagctggggctggccaa-ggaagaaggggaggagaca-------------------------------------------------------g-acagcgctcgccactgacgatgctccacccctgaccacctagacccctcgactggca----gttatcactcctgcttttatttcctttgggatacgttctttcccaggaggctcctagattctttttcaagcaagattctagcaggcgcctcccatcaatctttcagatacatttggatgtgtatgac-cccagctggggctcg----------------aCCCTGCACGTCCT--AGCACTAGAGACTTATGTCAGAGCTCCC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163970105 295 + 165299245 AGAGGCATGCAGGAGCCAGCTGGGGCTGGCCAaggggagacaggcaggagaca-------------------------------------------------------g-acagCGCTCGCCACTGACGATGCTCCACCCCTGACCACCTAGACCCCTCGACTGGCA----GTTATCActcctgcttttatttcctttgggatACGTTCTTTCCCAGGAGGCTCCTAGATTCTTTTTCAAGCAAGATTCTAGCAGGCGCCTCCCATCAATCTTTCAGATACATTTGGATGTGTATGAC-CCCAGCTGGGGCTCG----------------ACCCTGCACGTCCT--AGCACCAGAGACTTATGTCAGAGCTCCT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96755326 295 + 98384682 agaggcatgcaggagccagctggggctggccaaggggagacgggcaggagaca-------------------------------------------------------g-acagcgctcgccactgacgatgctccacccctgaccacctagacccctcgactggca----gttatcactcctgcttttatttcctttgggatacgttctttcccaggaggctcctagattctttttcaagcaagattctagcaggcgcctcccatcaatctttcagatacatttggatgtgtatgac-cccagctggggctcg----------------aCCCTGCACGTCCC--AGCACCAGAGACTTATGTCAGAGCTCCC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169966814 311 + 171630274 AGAGGCACTCAGGGGccagctggtgctggacgagaggcgatggacagatgaca-------------------------------------------------------g-acagtgctctccgctgacaatcttcc-cccttggccacct-gaaccactgactggca----gttatcactcctgctttcatttcctttgggacaagttctttcctgggaggttcctagattctctttcaagcagcattttagcaggtacctcccatccatctttcagacgcactcggatgtctatgag-ctcagctggggcctgagttaaggcagccactacCCTGCACGTCCCTATGCACCAGAGACTTATGTCACACTTCCT i calJac3.chr4 C 0 C 0 s canFam3.chr1 56233960 308 + 122678785 -AAGGCAGGCGTGAGTGCAAGTAGGCTAAACAAGGGAA-----ACACATCATG-------------------------------------------------------GCAGAGCTTTCATACCTGGAGATAACCTGCCCCAG-CTACCTAGACCTGCTCACCAGGACTTGGttatcatgcttggtttcacctcttttggttcaa-ttttcttccaagaggtactcaaactctcttccaaaagcgattttaacagactcatcccattgattttctagatatggttggttgtgtctgaattccagatgatgctca-attaggaccaccattacaCTGCATATGTG--AGCACCAGAGGCTTGTTCCAGAGTTCCT i canFam3.chr1 C 0 I 6455 a score=1739129.000000 s hg38.chr6_KB021644v2_alt 178387 628 + 185823 TGAAGATTCCTAGCacccagagtgctcctaaactaacggtattccctggtttctaacagaagcaaatgcaaatcctctctgaagaagagcatttctttggcccattttgtatgtctgtgtagcagggcgaaccacaaagaagctaacgattaaaaattaccagaaaaacctgaaagagtggcaccaggaatgagagtcacagaaagcaaacCaaaaatgagcccaaggaaagagaatattaaaaataaccagacataa------------------------------------------------------------ttagaatagataacttttagaaataaaaaaaa-tcagtgaattaaaaactcaatagttgttaaaatgaatgacgagagaagtaaaatagaagatttctctgaagaaattacacagagatacccagaaatataatgagatggtaaatataaaagaggttaagatatataaaaagtcaattgaaaaactctagcttaagtttaagctgtgccacagatgaaagagtaaagggaatggcatgaaagccatattatggaagaactaatactaagaaaa--taaaa---aaatccacacttatgcatattctaataaaacttcagaacagcaaaaacaaagagaagatcttaaatgcagctacagagacatgagaaacatc s panTro4.chr6 170767302 629 + 172623881 TGAAGATTCCTAGCacccagagtgctcctacactaacggtattccctggtttctaacagaagcaaatgcaaatcctctctgaagaagagcattgctttggcccattttgtatgtctgtgtagcagggcgaaccacaaagaagctcacgattaaaaattaccagaaaaacctgaaacagtggcaccaggaatgagagtcacagaaagcaaacCaaaaatgagcccaaggaaagagaatattaaaaataaccagacataa------------------------------------------------------------ttagaataggtaacttttagaaataaaaaaaaatcagtgaattaaaaactcaatagttgttaaaatgaatgatgagagaagtaaaatagaagatttctctgaagaaattacacagagatacccagaaatataatgagctggtaaatatgaaagaggttaagatatataaaaagtcgattgaaaaactctagcttaagtttaagctgtgccacagatgaaagagtaaagggaatggcatgaaagccatattatggaagaactaatactaagaaaa--taaaa---aaatccacatttatgcatattctaataaaacttcagaacagcaaaaacaaagagaagatcttaaatgcagctacagagacatgagaaacatc i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172527109 631 + 174210431 TGAAGATTCACAGCGCCCagagtgctcctaaacaaacagtattccctggtttctaacagaagcaaatgcaaatcctctctgaggaagagcatttcttcggcccattttgtatgtctgtgtagcaaggcgaaccacaaagaagctcacaattaaaaattaccagagaaaccggaaaaagtggcaccaggaatgagagtcacagaaaccagaccaaaaatgagcccaaggaaagagactattaaaaataaccagacataa------------------------------------------------------------ttagaatagataacttttagaaattagaaaaaatcagtgaattaaaaactcaatagttgttaaaacgaatgatgagagaagtaaaatagaagatttctctgaagaaattacacagagatacccagaaacataatgagatggtaaacataaaagaggttaaaatatataaaaagtcgattgaaaaactctagcttaagtttaaGCTGTGCCACAGATGAGAGAGTAAAGGGAATGGCGTGAAAGCCATATTATGGAAGAACTAATATTAagaaaatttaaaa---aaatccacacttatgcatattctaataaaacttcagaacagcaaaaacaaagagaagatcttaaatacagctacagagacatgagaaacatc i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156383576 617 + 157873769 TGAAGATTCATAGCGCCCagagtgctcctaaactaatagcattccctggtttctaacagaagcaaatgcaaatcctctctgaagaagagcatttcttcggcccattttgtatgtctgtgcagcaaggtgaaccacaaagaagctcacaattaaaaattacCAGAAAAACCTGAAAAAGTGGCAC---------GAGTCACAGAAACCAGACCAAAAACGAGCCCaaggaaagagactattaaaaataaccagacataa------------------------------------------------------------ttagaatagataacttttagaaattaaaaaaaatcagtgaattaaaaactcaatagttgttaaaatgaatgatgagagaagtaaaatagaagatttctctgaagaagttacacagagatacccagaaatataatgagatggtaaatataaaagaggttaagatatataaaaagccgattgaaaaactctagcttaagttcaagctgtgccacagatgaaagagtaaagggaatggcgtgaaagccatattatggaagaactaatactaagaaaa--t---a---aaatccacacttatgcatattctaataaaacttcagaacagcaaaaacaaagagaagatcttaaatgcagctacagagacgtgagaaacatc i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168199638 681 + 169853907 TGAAGATTCCTAGCG-CCGGAGTGCTCCTAAACTAAAGGTATTCCCTGGTTTCTAACAGAAGCAAATGCAAATCCTCTCCAAAGAAGAGCATTTCTTCGG-CCATTTTGTATGTCTGTGTAGCAAGGTGAACCACAAAGCAGCTCACAATTAAAAGTTACCAGAAAAACCCGAAAAAGTGGCACCAGAAATGACAGTCACAGAAACCAAATCAAAAATGAGCATAAGGAaagagactattaaacataaccagacataattagaatagataacttttaggaaaaaaaaatcagtgaattaaaaactctatgagacataattagaatagataacttttagaaa--aaaaa-------tcaattaaaaactcaatagttgttaaagtgaatgatgagagaagtaaaatagaagatttctctgaagaaattacacagagatacccagaaatataatgagatggtaaatataaaagaggttaagagatgtaaaaagtcgattgaaaaactctagcttcagtttaagctgagccacagatgaaagagtgaagggaatggtgtgaaagccatactatggaagaattaatagtaagaaaa--taaaaaagaaatccacacttatgcattttctaataaaacttcagaacggcaaaaacaaagagaagatcttaaatgcagctacagagacacgagaaacatc i rheMac3.chr4 C 0 I 1026 s macFas5.chr4 169154190 621 - 170955103 TGAAGATTCCTAGCG-CCGGAGTGCTCCTAAACTAAAGGTATTCCCTGGTTTCTAACAGAAGCAAATGCAAATCCTCTCCAAAGAAGAGCATTTCTTCGG-CCATTTTGTATGTCTGTGTAGCAAGGCGAACCACAAAGCAGCTCACAATTAAAAGTTACCAGAAAAACCCGAAAAAGTGGCACCAGAAATGACAGTCACAGAAACCAaatcaaaaatgagcataaggaaagagactattaaacataaccagacataa------------------------------------------------------------ttagaatagataacttttagaaa--aaaaa-------tcaattaaaaactcaatagttgttaaagtgaatgatgagagaagtaaaatagaagatttctctgaagaaattacacagagatacccagaaatataatgagatggtaaatataaaggaggttaagaggtgtaaaaagtcgattgaaaaactctagcttcagtttaagctgagccacagatgaaagagtgaagggaatggtgtgaaagccatactatggaagaactaatagtaagaaaa--taaaaaagaaatccacacttatgcattttctaataaaacttcagaacggcaaaaacaaagagaagatcttaaatgcagctacagagacacgagaaacatc i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163970400 628 + 165299245 TGAAGATTCCTAGCG-CCGGAGTGCTCCTAAACTAAAGGTATTCCCTGGTTTCTAACAGAAGTAAATGCAAATCCTCTCCAAAGAAGAGCATTTCTTAGG-CCATTTTGTATGTCTGTGTAGCAAGGCGAACCACAAAGAAGCTCACAATTAAAAGTTACCAGAAAAACCCAAAAAAGTGGTACCAGAAATGACAGTCACAGAAACCAAATCAAAAATGAGCCCAAGGAAAGAGACTATTAAACATAACCACACATAA------------------------------------------------------------TTAGAATAGataacttttaggaa--aaaaaaaatcagtgaattaaaAACTCAATAGTTGTTAAAGTGAATGATGAGAGAAGTAAAATAGAAGACTTCTCTGAAGAAATTACACAGAGATACCCAGAAATATAATGAGATGGTAAATATAAAGGAGgttaagaaatgtaaaaagtcGATTGAAAAACTCTAGCTTCAGTTTAAGCTGAGCCACAGATGAAAGAGTGAAGGGAATGGTGTGAAAGCCATACTATGGAAGAACtaatagtaagaaaa--taaaaaagaaatccacactTACGCACTTTCTAATAAAACTTCAGAACggcaaaaacaaagagaagatcTTAAATGCAGCTACAGAGACACGAGAAACATC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96755621 622 + 98384682 TGAAGATTCCTAGCA-CCGGAGTGCTCCTTAACTAAAGGTATTCCCTGGTTTCTAACAGAAGCAAACGCAAATCCTCTCCAAAGAAGAGCATTTCTTCGG-CCATTTTGTATGTCTGTGTAGCAAGGTGAACCACAAAGAAGCTCACAATTAAAAGTTACCAGAAAAACCCGAAAATGTGGCAACAGAAATGACAGTCACagaaaccaaatccaaaatgagcccaaggaaagagactattaaacataaccagacataa------------------------------------------------------------ttagaatagataacttttaggga--aaaaaaaatcagtgaattaaaaactctatggttgttaaagtgaatgatgagagaagtaaaatagaagatttctctgaagaaattacacagagatacccagaaatataatgagatggtaaatataaaagaggttaagagatgtaaaaagtcgattgaaaaactctagcttcagtttaagctgaggcacagatgaaagagtgaagcgaatggtgtgaaagccatattatggaagaactaatagtaagaaaa--taaaaaagaaatccatacttatgcattttctaataaaacttcagaacagcaaaaacaaagagaagatcttaaatgcagct------acatgagaaacatc i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169967125 614 + 171630274 CAAAGATTCGTGGCacctagagtgctcctaaatgaaccctatcccctggtttctaacagaagcaaatgcaaatccactctgaagaagagcatttcatcggtccattttgtatgtctatgtagcaagtcaaaccataaataagctcacaattgaaagtt---------aactgaaaacgtggcaccaggaatgagagtcaCAgaaacca-----aaaatgagcccaaggaaagagactattaaaaataaccagatataa------------------------------------------------------------ttagaacagataacttttaaaagttaaaaaga-tcactgaattaaaaactcaatagttgttaaaatgaataatgagagaagtaaaatagaagatttctgtgaagaaactacacaaggatgcctagaaatacaatgagatggtaaatgtaaaagaggtcaagagccgtaaaaggttgcctgaagaactctaaCTTAGGTTAGACCTGTGCCGCAGAT-AAACAATGAAGGGAGTGGCGTGAAAGCCAGATTACGGAAGAACTGATAGTTagaaaa--cagaa--gaaatccacatttgtgcatattctaataaaacttcagaacagcaaaaatgaagagaagatcttaaatgcagttacagagatgtgagaaacatc i calJac3.chr4 C 0 C 0 e canFam3.chr1 56234268 6455 + 122678785 I a score=961110.000000 s hg38.chr6_KB021644v2_alt 179015 437 + 185823 tctaatgaaataattcaactgcctgaagattagtgaacagaaacaatgagaattaggagacagaagaataaccttttccaagcactgtaagaaaagaagtaccaactgaagatggtgtacctagcaaaattagcttcaagaattatagcaatataaagacattttagataacaaaaaactgagtcacctatagggagaacattattattaaatatagtgctaaatgattattttgaaggatttcagtaaggag-aaaataatcct-----------------------acaaacaagtaagagaaaagagagtgataattatgtgactaaatgtaaacaaccataatgatataaat---aataataaaataata---tatcttgggattttaaaagatatgcaactaaaatacaaggaaacaattgcaaataaattggaagaatggttagtgaaatgaaaatttcct s panTro4.chr6 170767931 440 + 172623881 tctaatgaaataattcaactgcccgaagattagtgaacagaaacaatgagaattaggagacagaagaataaccttttccaagcactgtaagaaaagaagtaccaactgaagatggtgtacctagcaaaattagcttcaagaattatagcaatataaagacattttagataacaaaaaactgagtcacctatagggagaacattattattaaatatagtgctaaatgattattttgaaggatttcagtaaggag-aaaataatcct-----------------------acaaacaagtaagagaaaagagagtgataattatgtgactaaatgtaaacaaccataatgatataaat---aataataaaataataatatatcttgggattttaaaagatatgcaactaaaatacaaggaaacaattgcaaataaattggaagaatggttagtgaaatgaaaatctcct i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172527740 440 + 174210431 tctaatgaaataattcaactgcccaaagattagtgaacagaaacaatgagaattaggagacagaagaataaccttttccaagcactgtaagaaaagaagtaccaactgaagatgctgtacctagcaaaattagcttcaagaattatagcaatataaagacattttagataacaaaaaactgagttacctaaagggagaacattattattatatatagtgctaaatgattattttgaaggatttcagtaaggag-aaaataatcct-----------------------aaaaacaagtaagagaaaagagagtgatgattctgtgactaaatgtaaacaaccataatgatataaat---aataataaaataataatatatcttggcattttaaaagatatgcaactaaaatacaaggaagcaattgcaaataaattggaagaatggttagtgaaattaaaatttcct i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156384193 441 + 157873769 tctaatgaaataattcaactgcctgaagatttgtgaacagaaacaatgcgaattaggagacagaagaatgaccttttccaagcactgtaagaaaagaagtaccaactgaagatggtgtacctagcaaaattagcttcaagaattatagcaatataaagacattttagataacaaaaaactgagtcacctatagggagaacattattattaaatatagtgctaaatgattattttgaaggatttcagtaaggagaaaaataatcct-----------------------aaaaacaattaagagaaaagagagtgataattatgtgactaaatgtaaacaaccataatgatataaat---aataataaaataataatatatcttgggattttaaaagatatgcaactaaaatacaaggaaacaattgcaaataaattggaagaatggttagtgaaattaaaatttcct i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169154811 465 - 170955103 tgtaatgaaataatttaactgccagaagatttgtgaacagaaacaatgagaattaggagacagaagaataaccttttccaagcatcgtaagaaaagaattaccagctgaggatggtatacctagcaaaattagcttcaagaattacagcaatataaagacattttagataacaaaaaactaagtcacctatagggagaacattattataaagtatagcgctagaggattattttgaaggatttcagtaagaag-aaaataatcctagaatgaagatctggcattt-aaaaaaaaaattaagagaaaagagagtgataattatgtgactaaatgtaaacaaccataatgatataaataacaataataaaataataatatatcttgggattaaaaaagatatgcaactaaaatacaaggaaacaattgcaaataaattgggagaatggttagtgaaattaaactttcct i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163971028 466 + 165299245 TGTAATGAAATAATTCAACGGCCAGAAGAATTGTGAACAGAAACAATGAGAATTAGGAGACAGAAGAATAACCTTTTCCAAGCACCGTAAGAAAAGAATTACCAGCTGAGGATGGTGTACCTAGCAAAATTAGCTTCAAGAATTACAGCAATATAAAGACATTTTAGATAACAAAAAACTAAGTCACCTATAGGGAGAACATTATTATTAAGTATAGCGCTAGAGGATTATTTTGAAGGATTtcagtaagaag-aaaataatcctaGAATGAAgatctgacatttaaaaaaaaaaattaagagaaaagagaGTGataattatgtgactaaatgtaaacaaccataatgatataaataacaataataaaataataatatatcttgggattaaaaaagatatgcaactaaaataCAAGGAAACAATTGCAAATAAATTGGGAGAATGGTTAGTGAAATTAAACTTTCCT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96756243 462 + 98384682 tgtaatgaaataattcaactgccagaagatctgtgaacagaaacaatgagaattaggagacagaagaataaccttttccaagcactgtaagaaaagaattaccagctgaggatggtgtacctagcaaaattagcttcaagaattacagcaatataaagacattttagataacaaaaaactaagtcagctatagggagaacattatt---aagtatagcgctagaggattattttgaaagatttcagcaagaag-aaaataatcctagaatgaagatctgacattt-aaaaaaaaaattaagagaaaagagagtgataattatgtgactaaatgtaaacaaccctaatgatataaataacaataataaaataataatgtatcttgggatttaaaaagatatgcaactaaaatacaaggaaacaattgcaaataaattgcaagaatggttagtgaaattaaaatttcct i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169967739 446 + 171630274 tctaatgaaataattccactgccagaatatctgtgaacagaaacaatgagaattagaaggcagaagaataacattttccaagccctgtaaggaaagaatttccaactgagaaggatgtgcgtagcatgatcagcttcaagaa--agagcaatgtgaagacactgtaggtagc----aactgagtcacctgccaggagaacattatt---aaatatagtgctaaatgattctatttaaggattttagtaaggag-aaaataatcctagaatgaagatctgaaattt---aaaaaaaattaagagacgagagagtgataattatttgtgtaaatataaacaaccataatgatataaat---gat-----aataataatatatgttgggatttaaaaagataagcaactaaaatacgaggaaaccattgcacataaattggaagaatggttagtgaagttaaaAttttct i calJac3.chr4 C 0 I 882 e canFam3.chr1 56234268 6455 + 122678785 I e rheMac3.chr4 168200319 1026 + 169853907 I a score=549472.000000 s hg38.chr6_KB021644v2_alt 179452 313 + 185823 aatgccaaagtctagtcttcctcttgaaaaggtttaagttataga-tttcttttcttgtattttctttggtggttttggtatcaggataattctgagcttataaaataagttgaaaagttttcccctc-tttattttctggaagaggttgtataaaattgctgttagctcttctttaaatg-------tctgttagaatcctccagtgaaatcatgtgggcctgaaaatctctttttgggagatttttagttaggcttcgatgtctttaatgtttataaaactcttccaattatctatttcatcttggttgagatttttcag s panTro4.chr6 170768371 313 + 172623881 aatgccaaagtctagtcttcctcttgaaaaggtttaagttataga-tttcttttcttgtattttctttggtggttttggtatcaggataattctgagcttataaaataagttgaaaagttttcccctc-tttattttcttgaagaggttgtataaaattgctgttagctcttctttaaatg-------tctgttagaatcctccagtgaaatcatgtgggcctgaaaatctctttttgggagatttttagttaggcttcgatgtctttaatgtttataaaactcttccaattatctatttcatcttgtttgagatttttcag i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172528180 314 + 174210431 aaTGCCAAAGTCCAGTCTTCCTCTTGAAAAGGTTTAAGTtataga-tttcttttcttgtattttctttgggggttttggtatcaggataattctgagcttataaaataagttgaaaaattttcccctcttttatttgctggaagaggttgtataaaattgctgttagctcttctttaaatg-------tctgttggaatcctccagtgaaatcatgtgggcctgaaaatttctttttgggagatttttagttaggcttcaatgtctttaatgtttataaaactcttctaattatctgtttcatcttggttgagatttttcag i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156384634 314 + 157873769 aaTGCCAAAGTCTACTCTTCCTCTTGAAAAGGTTCAAGTtataga-tttcttttcttgtattttctttggtggtcttggtatcaggataattctgagcttataaaataagttgaaaagttttcccctcttttattttctggaagaggttgtataaaattgctggtagctcttctttaaatg-------tctgttagaatcctccagtgaagtcatgtgggcctgaaaatctctttttgggagatgtttagttaggcttcaatgtctttaatgtttataaaactcttccaattatctatttcatcttggttgagatttttcag i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169155276 320 - 170955103 aaTGCCAAAGTCTAGTCTTCCCCTTGAAAAGGTTTCAGTGATAGAttttcttttcttgtgttttctttcgtggttttggtatcaggataattctgagcttataaaataagttgaaacgttttccc--cttttattttctggaagaggttgtataaaattgctgttagctcttctttaaagaagagaattctgttagaatcctccagtgaaatcatgtgggcctgaaaatctctttttgggagatttttagttaggcttcaatgtctttaatgtttataaaactcttccagttatctatttcatcttggttgagatgtttcgg i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163971494 311 + 165299245 AATGCCAAAGT-----------CTTGAAAAGGTTTCAGtgatagattttcttttcttgtgttttctttcgtggttttggtatcaggataattcTGAGCTTATAAAATAAGTTGAAATGTTTtcccctcttttattttctggaagaggttGTATAAAATTGCTGTTAGCTCTTCTTTAAAGAAGAGAATTCTGTTAGAATCCTCCAGTGAAATCATGTGGGCCTGAAAATCTCTTTTTGGGAGATTTTTAGTTAGGCTTCAATGtctttaatgtttataaaactCTTCCAGTTATCTATTTCATCTTGGTTGAGATGTTTCGG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96756705 315 + 98384682 aaTGCCAAAGTCTAGTCTTCCCCTTGAAAAGGTTTCAGTGATAGAttttcttttcttgtattttctttggtggttttggtatcaggataattctgagcttataaaataagttgaaaagtttccccctcttttcttttctggaagaggttgtatgaaattgctgttagctcttctttaaatg-------tctgttagaatcctccagtgaaatcatgtgggcctgaaaatctctttttgggagatttttagttaggcttcaatgtctttaatgtttataaaactcttccaattatctatttcatcttggttgagatgtttcgg i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169968185 882 + 171630274 I e canFam3.chr1 56234268 6455 + 122678785 I e rheMac3.chr4 168200319 1026 + 169853907 I a score=415930.000000 s hg38.chr6_KB021644v2_alt 179765 200 + 185823 tttgtgattttcaaggaattggtttatttcttccaagt-gtcaaatttatgaacataaattggttgttgcagtcctttattttatttagatcatggtaggatctgtagtgatatcacttatttcactcctgatatttctggtttg-tatcttctcttttttcttttgtcagtattgctagagtctattaactttgttga---ttt s panTro4.chr6 170768684 200 + 172623881 tttgtgattttcaaggaattggtttatttcttccaagt-gtcaaatttatgaacataaattggttgttgcagtcctttattttatttagatcatggtaggatctgtagtgatatcacttatttcactcctgatatttctggtttg-tatcttctcttttttcttttgtcagtattgctagagtctgttaactttgttga---ttt i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172528494 200 + 174210431 tttgtgattttcaaggaattggtttatttcttccaagt-gtcaaatttatgaacataaattggttgttgcagtcctttattttatttagatcatggtaggacctgtagtgatatcacttatttcactcctgatatttctggtttg-tatcttctcttttttcttttgtcagtattgctagagtctattaactttgttga---ttt i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156384948 193 + 157873769 tttgtgattttcaaggaattggtttatttcttccaagt-gtcaaatttatgaacataaattggttgttgcactcc-----tttatttagatcatggtaggatctgtagtgatatcatttatttcactcctgatatttctggtttg-tatcttctcttttttcttttgccagtattgct--agtctattaactttgttga---tta i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169155596 193 - 170955103 tttgtgattttcaaggaagtgatttatttcttctgagtggtcagacttatgaacataaattggttgttgcagtcctttattttatttagatcacggtaggatctgtagtggtatcacttattttactcctgatatttctggtttg-tatcttc-----tttcttttgtcagtcttgctagagtctgttaacttcattga------ i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163971805 193 + 165299245 TTTGTGATTTTCAAGGAAGTGATTTATTTCTTCTGAGTGGTCAGACTTATGAACATAAATTGGTTGTTGcagtcctttattttatttagatcaCAGTAGGATCTGTAGTGATATCACTTATTTTACTCCTGATATTTCTGGTTTG-TATCTTC-----TTTCgtttgtcagtcttgctagagTCTGTTAACTtcgttga------ i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96757020 197 + 98384682 tttgtgattttcaaggaagtgatttatttcttctgagtggtcagatttatgaacataaattggttgttgcagtcctttattttatttagatcagggtaggatctgtaatgatatcacttattttactcctgatatttctggtttgttatcttc-----tttcttttgtcagtcttgctagagtctgttaacttccttgatct--- i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169969067 200 + 171630274 tttgtgattttcgaggaaatggtttatttcttctaagaggtcaaatttatgaacataaattggttgttgcggtcccttattttatttagatccctgtagggtctgtagtgatatcacttattttactcctgatgcttctggtttg-tatagtc-tttgtttcttttgtcagtcttggtagagtttattaattttgttga---ttt i calJac3.chr4 I 882 C 0 e canFam3.chr1 56234268 6455 + 122678785 I e rheMac3.chr4 168200319 1026 + 169853907 I a score=3191873.000000 s hg38.chr6_KB021644v2_alt 179965 1106 + 185823 tttttttgaaga---aacagctttaggttttgttaa-ttttttctattaaatttctatttcagtttcacagattttgctccctattatttccttctatctacttgattt-tagtttattttgttctact-tttctac-ttttttgaggcactcacttagataattgatttgagaccgttactgttttgtagtataagcaattcatgttatagatttccctcttagcactgctttag--ctgctgcacatattttgaaatgctgtgttttcattttcattctattctatgtgtttcttaaacttttggagactttttcttgacacgtggattatttaaaagtctgttgcttaatttccttatgtttaaatattttcctgttgatttttagtgattgatttctagttcgctttcattatgtca--------------------gataatagactatatgactacaatttttaaatgtattgaagtttgttttatgtctcaggatgtggtctatcttagtgaatgttccgtggacacctgtaaacatgtatatcctgctgttgtcataggcaatgtattgcttatgtcaattagatactgttaattgactgtg-ttattcagatcctatatatcctggctgtttttctgcttatttttcagttgctgagagagaggtattaaaatctacaaccataatgtttgattggtctatttctcctttcagttgttgat--tcatgtattttaaggtgctgttgtttggtgcatatacatttagaattattataacttcctggtagatttatctttttatcatttttgtactgtccctctttgtctctagtaatttcctttgctctgaagtcgactttattagatattaatagagtcacttctgatttttagattaatgctgcatggtctgtctttgttcatcctcctcctttcaaacgagccatataattgaatgtgaagtgagtttctaataaggtgcatataggtgagtggtattttctttatttactctgccaatctgtgtattttgattgatgtatttaggccattttcattttatataattattgatatattagggcttatctctgtttctgcgagcaacaattttctttctacttttctt s panTro4.chr6 170768884 1104 + 172623881 ttttt--gaaga---aacagctttaggttttgttaa-ttttttctgttaagtttctaattcagtttcacagattttgctccatattatttccttctatctacttgattt-tagtttattttgttctact-tttctac-ttttttgaggcactcacttagataattgatttgagaccgttactgttttgtagtataagcaattcatgttatagatttccctcttagcactgctttag--ctgctgcacatattttgaaatgctgtattttcattttcattctattctatgtgttttttaaacttttggagactttttcttgacacatggattatttaaaagtctgttgcttaatttccttatgtttaaatattttcctgttgatttttagttattgatttctagttcgctttcattatgtca--------------------gataatagactatatgactacaattttttaatgtattgaagtttcttttatgtctcaggatgtggtctatcttagtgaatgttccgtggacacctgtaaacatgtatatcctgctgttgtcatatgcaatgtattgcttatgtcaattagatactgttaattgactgtg-ttattcagatcctatatatcctggctgtttttctgcttatttttcagttgctgagagagaggtattaaaatctacaaccataatgtttgatttgtctatttctcctttcagttgttgat--tcatgtattttaaggcactgttgtttggtgcatatacatttagaattattataacttcctggtagatttatcttcttatcatttttgtactgtccctctttgtctctagtaatttcctttgctctgaagtcgcctttattagatattaatagagtcacttctgatttttagattaatgctgcatggtctgtctttgttcatcctcctcctttcaaactagccacataattgaatgtgaagtgagtttctaataaggtgcatataggtgagtggtattttctttatttactctgccaatctatgtattttgatggatgtatttaggccattttcattttatataattattgatatgttagggcttatctctgtttctgcgagcaacaattttctttctacttttctt i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172528694 1103 + 174210431 ttttt-tgaaga---aacagttttaggttttgttaatttttttctattaaatttctatttcagtttcacagattttgctccctattatttccttctatctacttgattt-tagtttattttgttctact-tttctactttttttgaggcactcacttagataattgatttgagaccattactgttttgtagtataagcaattcatgttatagatttccctcttagtactgctttagctctgttgcacatattttgaaatgctgtattttca-tttcattctattctatgtattttttaaacttttggagactttttcttgacacatggattatttaaaagtctgttgcttaatttccttatgtttaaagattttcctgttgatttttagctattgatttctagtttgctttcattatgtca--------------------gataatagactatataactacaatttttaaatgtattgaggtttgttttatgactcaggatgtggtcgatcttagtgaatgttctgtggacacctgtaaacatgcatatcctgctgttgtcatatggaatgtattgcttatgtcaattagatactgttaattgattgtg-ttattcagatcctatatatcttggctgtttttctgcttatttttcagttgctgagagagaggtattaaaatctacaaccataatgttt-----gtctatttctcctttcagttgttgat--tcatatattttaaggcgctgttgtttggtgcatatacatttagaattattataacttcctggtagatttatctttttattatttttgtactgtccctctttgtctctagtaattttctttgctctgaagccgactttattagatattaatagagtcacttctgatttttagattaatgctgcatggtctatctttgttcatcctcttactttcaaactagccatataattgaatttgaagtgagtttctaataaagtgcatataggtgagtggtattttctttatccactctaccaatctgtgtattttggttgatgtatttaggccatttacattttatataattgttgatatattagggcttatctctgtttctgcgagcaacaattttctttctacttttctt i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156385141 1106 + 157873769 ttttt--gaaga---aacagctttaggttttgttaa-ttttctctattaaatttctatttcagtttcacagattttgctccctactatttccttctatctacttgattt-tagtttattttgttctact-tttctac-ttttttaaggcactcacttagataattgatttgagacttttactgttttgtagtataagcaattcatggtatagatttccctcttagcactgctttagctctgttgcacatattttgaaatactgtattttcattttcattctattctatgtattttttaaacttttggagactttttcttgacacatggattatttaaaagtctattgcttaatttccttatgtttaaagattttcctgttgatttttagttattgatttctagttcgctttcattatgtca--------------------gataatagactatatgactacaatttttaaatgtattgaggtttgttttatgactcaggatgtggtctatcttagtgaatgttccgtggacacctgtaaacatgcatatactgctgttgtcatatggaatgtattgcttatgtcaattagatactgttaattgattgtg-ttattcagatcctatatatcctggctgtttttctgcttatttttcagttgctgagagagaggtattaaaatctacaaccataatgtttgatttatctatttctcctttcagttgttgat--tcatgtattttaaggcgctgttgtttggtgcatatacatttagaattattataacttcctggtagatttatcttttcatcatttttgtactgtccctctttgtctctagtaattttctttgctctgaagttgactttattagatattaatagagtcacttctgatttttagattaatgctgcatggtcaatctttgttcatcctcctactttcaaactagccatataattgaatttgaagtgagtttctaataaagtgcatataggtgagtggtattttctttatccattctgccaatctgtgtattttgattgatgtatttaggccatttacattttatataattattgatatgttagggtttatctctgtttctgcgggcaacaattttctttctacttttctt i nomLeu3.chr3 C 0 I 730 s rheMac3.chr4 168201345 1114 + 169853907 tttttttgaaaa---aacagctttagatt---ttaa-ttttttctattaaatttctgttttggtttcacagattttgctccctattatttccttctatctacttgattt-tagtttattttgttgtact-tttctac-ttttttgaggcattcacttagataattgatttgaaacctttactgttttgtagtataagcaattcatgttatagatttccctctcagcactgctttagctgtgttgcacatattttgaaatgctgtattttcattttcattctattctatgtattttttaaacctttggagactttttcctgacaaatggctcatttaaaagtctgtagtttaatttccttatgtttagagattttcctgttgatttttagttattcatttctagtttgctttcattatattannnnnnnnnnnnnnnnnnnn------------tatgactataatttttaaatgtattgaggtttgttttatgacttaggatgtggtctatcttagtgaatgctccgtggacacctgtaaacatgcatatcctgatgttgtcgtatggaatgtattgcttatgtcaattagatactgttaattgattgtgattattcagatcctatgtatcctggctggttttctccttatttatcagttgctgacagagaggtattaaaatctacaaccataatgtttgatttgtctatttctcctttcagttgttgat--tcatgtattttaaggtgctgttgtttggtgcatatacatttagaattattataacttcctggtagatttatctttttatcatttttgtagtgtccctctttgtctctagtaattttctttgctctgaagtctactttattagatattaatagagtctcttctgatttttagattaatgctgcatggtctatctttgttcatccttctactttcaaactggccatataattgaatttaaagtgagttgctaataaagggcatataggtgagtggcattttctttatccactctgccaatctgtgtattttgattgatgtatttaggccatttacactttatataattattgatatgttagggcttatctctgtttccacaagcaacttatatctttctacttttctt i rheMac3.chr4 I 1026 C 0 s macFas5.chr4 169155789 1106 - 170955103 tttttttgaaaa---aacagctttagatt---ttaa-ttttttctattaaatttctgttttggtttcacagattttgctccctattatttccttctatctacttgattt-tagtttattttgttttact-tttctac-ttttttgaggcattcacttggataattgatttgaaacctttactgttttgtagtataagcaattcatgttatagatttccctctcagcactgctttagctgtgttgcacatattttgaaatgctgtattttcattttcattctattctatgtattttttaaacctttggagactttttcctgacaaatggctcatttaaaagtctgtagtttaatttccttatgtttagagattttcccgttgatttttagttattcatttctagtttgctttcattatgtta--------------------gagaatagactatatgactataatttttaaatatattgaggtttgttttatgactcagtatctggtctatcttagtgaatgctccgtggacacctgtaaacatgcatatcctgctgttgtcgtatggaatgtattgcttatgtcaattagatactgttaattgattgtgattattcagatcctatgtatcctggctggttttctgcttatttatcagttgctgacagagaggtattaaaatctacaaccataatgtttgatttgtctatttctcctttcagttgttgat--tcatgcattttaaggtgctgttgtttggtgcatatacatttagaattattataacttcctggtagatttatctttttatcatttttgtagtgtccctctttgtctctagtaattttctttgctctgaagtctactttattagatattaatagagtctcttctgatttttagattaatgctgcatggtctatctttgttcatccttctactttcaaactggccatataattgaatttaaagtgagttgctaataaagggcatgtaggtgagtggcattttctttatccactctgccaatctgtgtattttgattgatgtatttaggccatttacactttatataattattgatatgttagggcttatctctgtttccacaagcaacttagatctttctacttttctt i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163971998 1102 + 165299245 tttttttgaaaa---aacagctttagatt---ttaa-ttttttctattaaatttctgttttggtttcacagattttgctccctattatttcCTTCTATCTACttgattt-tagtttattttgttgtact-tttctac-ttttttgaggCATTCACT----TAATTGATTTGAAACCTTTACTGTTTTGTAGTATAAGCAATTcatgttataaatttccctctcagcactgctttagctgtgttgcacatattttgaaatgctgtattttcattttcattctattctatgtattttttaaacctttggAGACTTTTTCCTGACAAATGGCTCATTTAAAAGTCTGTAGTTTAATTTCCTTATGTTTAGAGATTTTCCTGTTGATTTTTAGTTATTCATTTCTAGTTTGCTTTCATTATGTTA--------------------GATAATAGACTATatgactataatttttaaatgtattgagatttgttttatgactCAGGATGTGGTCTATCTTAGTGAATGCTCCGTGGACACCTGTAAACATGCATATCCTGCTATTGTCGTATGGAATGTATTGGTTATGTCAATTAGATACTGTTAATTGATTGTGATTATTCAGATCCTATGTATCCTGGCTGGTTTTCTGCTTATTTATCAGTTGCTGACAGAGAGGTATTAAAATCTACAATCATAATGtttgatttgtctatttctcctttcagttgtTGAT--TCATGCATTTTAAGGTGctgttgtttggtgcatatacatttagaattattATAACTTCCTGGTAGAtttatctttttatcatttttgtagtgtccctctttgtctctagtaattttctttgctctgaagtctactttattaGATATTAATAGAGTCTCTTCTGATTTTTAGATTAATGCTGCATGGTCTATCTTTGTTCATCCTTCTACCTTCAAACTGGCCATATAATTGAATTTAAAGTGAGTTGCTAATAAAGGGCATATAGGTGAgtggcattttctttatccactctgcCAATCTGTGTATTTTGATTGATGTATTTAGGTCATTTACACtttatataattattgatatgttagggCTTATCTCTGTTTCCACAAGCAACTTatatctttctacttttctt i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96757217 1100 + 98384682 ----ttttgaaa---aacagctttagatt---ttaa-ttttttctattaaatttctgtttcggtttcacagattttgctccctattatttccttctatctacttgattt-tagtttattttgttgtact-tttctac-ttttttaaggcattcacttagataattgatttgaaacctttactgttttgtagtataagcaattcatgttatagatttccctctcagcactgctttagctgtgttgcacatattttgaaatgctgtattttcattttcattctactctatgtattttttaaacctttggagactttttcctgacaaatggctcatttaaaaatctgtagtttaatttccttatgttcagagattttcctgttgatttt--gttattcatttctagtttgctttcattatgtca--------------------gataatagactatatgactataatttttaaatgtattgaggcttgttttatgactcaggatgtggtctatcttagtgaatgctccgtggacacctgtaaacatgcatatcctgctgttgtcgtatggaatgtattccttatgtcaattagatactgttaattgattgtgattattcagatcctatgtatcctggctggttttctgcttatttatcagttgctgacagagaggtattaaaatctacaaccataatgtttgatttgtctatttctcctttcagttgttgat--tcatgcattttaaggtgctgttgtttggtgcatatagatttagaattattataacttcctggtagatgtatctttttatcatttttgtagtgtccctctttgtctctagtaattttctttgctctgaagtctactttattagatattaatagagtctcttctgatttttagattaatgctgcatggtctatctttgttcatccttctactttcaaactggccatataattgaatttaaagtgagttgctaataaagggcatataggtgagtggcattttctttatccactctgccaatctgtgtattttgattgatgtatttaggccatttacacttcatataattattgatatgttagggcttatctctgtttccacaagcaacttatatctttctacttttctt i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169969267 1098 + 171630274 -ttttttgaagaaacaacagctttaggttttattac-ctttttctattacatttctatttt-------cag--tttgcttcctactgtttccttctatctacttgatttctgttttattttgttctactgtttttgc-ttatttgaggcagtcacttagacaattgatctgagacctttactgttttgtagtataagcaattcatgttacagatcttcttctcagcactgcgttagctgtattgcacattttttgaaatgctgtattttcattttcattctattctatgtattttttaaacttttcaagacgttttcttgacacatggattatgt-aaagtctgttgctttatttccttatgtttagagagtttcctgttgagttttagttattgatttctagtttgccttcattatgtca--------------------gataatagactgtatgactacagtttttaaatgtattgaggtttgttttatgactcaggatgtggtctatcttggtgaatgctccgtggacacctgtaaacatgcacatcctgctgtcatcctgtggaatgcattgcttatgtcaattagatactgttaactgattgtg-ttgttgagatcctgtatatcctgactgtttttctgctta----tcagttgctgagagaaaggcattaaaatctacaaccat-acgttagatttgtctatttctcctttttgttgttcattataatgca-tttaaggctctgttgtttggtgcatatacattcagaattattataacttcctggtagatttatcattttctcattttcatgctgcccctctttgtctctagtaattgtctttgctctgaagtccactttattagatattactagagttacttcggagttttagattaatgctgtgtggtacatctttgttcatactcctactttcaaactagtcatataactgaatttgaagtgagtttctaataaagtgcatgtaggtgagtggtgttttctttatccactctgccaatatgtgtcttttgattgatatatttaggccattgatattttatgtaattattgatttgttggggcttatctctgtttctgtgagcaacaattttctttctactcttctt i calJac3.chr4 C 0 C 0 e canFam3.chr1 56234268 6455 + 122678785 I a score=1399572.000000 s hg38.chr6_KB021644v2_alt 181071 476 + 185823 tcatctgagtatgtctttatttggagttgaaagttcttttcattcagcagttaaatggtatgggaaaaacaagaaaaaaa-tattgggctgcttctttctggctttcattatttcaggtgataaatcctttatattttaactgctgttcacctataggtaatgggtttctttctggccaatttcaagatgttttttctttgttttcaTTACCTACAGGTGTGTGTTGCGCTGTGGGATTCAGCTCGAATCGTCCTTCCCCCGTTAGTTGTGCACACATTAACTCAGCTAATCTGTGCAATGAGAAAAGCATGTCTAAATACGACTAAAGTTTTCAAAACCACCACGGCATGGAAAGTCAGTGATCCACAGATTAGAACAACATTCCATTGTAAAGCATCTCTAAGGAAAAGCATCCAAGATAAAAAGATAACAGCCTGAGAAAATGTTTGTAATAATGATGTTTATCACTTGCACAT s panTro4.chr6 170769988 474 + 172623881 tcatctgAGTATGTCT--Atttggtgttgaaagttcttttcattcagcagttaaatggtatgggaaaaacaagaaaaaaa-tattgggctgcttctttctggctttcattatttcagatgataaatcctttatattttaactgctgttcacctataggtaatgggtttctttctggccaatttcaagatgttttttctttgttttcaTTACCTACAGGTGTGTGTTGCGCTGTGGAATTCAGCTTGAATTGTCCTTCCCCCGTTAGTTGTGCACACATTAACTCAGCTAATCTGTGCAATGAGAAAAGCATGTCTAAATACGACTAAAGTTTTTAAAACCACCACGGCATGGAAAGTCAGTGATCCACAGATTAGAACAACATTCCATTGTAAAGCATCTCTAAGGAAAAGCATCCAAGATAAAAAGATAACAGCCTGAGAAAATGTTTGTAATAATGATGTTTATCACTTGCACAT i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172529797 475 + 174210431 tcatctgagtatgtctttatttggagttgaaagttcttttcattcagcagttaaatggtatggaaaaaataagaaaaaaa-tattgggttgcttctttctggctttcattatttcagatgataaatcctttatattttaactgctgttcacctataggtaatgggtttctttctggccaacttcaggatgttttttctttgttttcaTTACCTACAGGTGTGTGTTGTGCTGTGGGATTTGGTTCAAATCGTCCTTCCCCCATTAGTTGTGCACACATTAACTCAGTTAATCTGTGCAATGAGAAAAGCGCGTCTAAATATGACTAAAGTTTTTAAAACCACCAAGGCATGGAAAGTCA-TGATCCACAGATTAGAACAACATTCCATTGTAAAGCATCTCTAAGGAAAAGCATCCAAGATAAAAAGATAACAGCCTGAGAAAATGTTTGTAATAATGATGTTTATCACTTGCATAT i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156386977 476 + 157873769 tcatctgaGTATGTCTTTatttggggttgaaagttcttttcattcagcagttaaatggtatgggaaaaacaagaaaaaaa-tattgggctgcttctttctggctttcattatttcagatgataaatcctttatattttaactgctgttcacctataggtaatgggtttctttctggccaatttcaagatgttttttctttgttttcaTTACCAACAGGTATGTGTTGCACTGTGGGATTTGGCTCAAATCGTCCTTCCCTCGTTAGTTGTGCACACATTAACTCAGTTAATCTGTGCAATGAGAAAAGCATGTCTAAATATGACCAAAGTTTTTAAAACCACCAAGGCATGGAAAATCAGTGATCCACAGATTGGAACAACATTCCATTGTAAAGCATCTCTAAGGAAAAGCATCCAAGATAAAAAGATAACAGCCTGAGAAAATGTCTGTAATAATGATGTTTATCACTTGCACAT i nomLeu3.chr3 I 730 C 0 s rheMac3.chr4 168202459 476 + 169853907 tcatctgAGTATGTCTTTatttggagttgaaagttcttttcattcagcggttaaatggtgtggggaaaacaagaaaaaagctattgggctgcttctttctggctttcatcatttcagatgataaatccttcacattttaactgctgttcacctataggtaatgggtttctttctggtcaatttcaagatgctttttctttgtgttcaTTACCTACAGGTGTGTGTTGCGCTGTGGGATTCGGCTCAAATCGTCCTTCCCCCGTTAGTTGTGCACACATTAACTCTGTTAATCTGTGCAATGAGGAAAGCACGTCTAGATAAGACTAACGTTTTTAAAACCACGAAGGCAT-GAAAGTCAGTGATCCACAGATTAGAACGACATTCCATTGTAAAGCATCTCTAAGGGAAAGCATCCAAGATAAAAAGATAACGGCCCGAGAAAATGTTTGTAATAATGATGTTTATCAGTTTTACAT i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169156895 476 - 170955103 tCATCTGAGTATGTCTTTatttggagttgaaagttcttttcattcagcggttaaatggtgtggggaaaacaagaaaaaagctattgggctgcttctttctggctttcatcatttcagatgataaatccttcacattttaactgctgttcacctataggtaatgggtttctttctggtcaatttcaagatgctttttctttgtgttcaTTACCTACAGGTGTGTGTTGCGCTGTGGGATTCGGCTCAAATCGTCCTTCCCCCGTTAGTTGTGCACACATTAACTCTGTTAATCTGTGCAATGAGGAAAGCACGTCTAGATAAGACTAACGTTTTTAAAACCACGAAGGCAT-GAAAGTCAGTGATCCACAGATTAGAACGACATTCCATTGTAAAGCATCTCTAAGGGAAAGCATCCAAGATAAAAAGATAACGGCCCGAGAAAATGTTTGTAATAATGATGTTTATCAGTTTTACAT i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163973100 477 + 165299245 tcatctgagtatgtctttatttggAGTTGAAAGTTCTTTTCATTCAGCGGTTAAATGGTGtggggaaaacaagaaaaaagctatTGGGCTGCTTCTTTGTGGCTTTCATCATTTCAGATGATAAATCCTTCACATTTTAACTGCTGTTCACCTATAGGTAATGGGTTTCTTTCTGGTCAATTTCAAGAtgctttttctttgtgttcattaCCTACAGGTGTGCGTTGCGCTGTGGGATTCGGCTCAAATCATCCTTCCCCCATTAGTTGTGCACACATTAACTCAGTTAATCTGTGCAATGAGGAAAGCACGTCTAGATAAGactaatgtttttaaaaccacGAAGGCATGGAAAGTCAGTGATCCACAGATTAGAACGACATTCCATTGTAAAGCATCTCTAAGGGAAAGCATCCAAGATAAAAAGATAACGGCCcgagaaaatgtttgtaataatGATGTTTATCAGTTGTACAT i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96758317 477 + 98384682 tcatctgagtatgtctttatttggagttgaaagttcttttcattcagcggttaaatggtgtggggaaaacaagcaaaaagctattgggctgcttctttctggctttcatcatttcagatgataaatccttcacattttaactgctgttcacctataggtaatgggtttctttctggtcaatttcaagatgctttttctttgtgttcaTTACCTACAGGTGTGTGTTGTGCTGTGGGATTCGGCTCAAATCATCCTTCCCCCATTAGTTGTGCACACATTAACTCAGTTAATCTGTGCAATGAGGAAAGCACGTCTAGATAAGACTAACGTTTTTAAAACCACGAAGGCATGGAAAGTCAGGGATCCACAGATTAGAACAACATTCCATTGTAAAGCATCTCTAAGGGAAAGCATCCAAGATAAAAAGACAACGGCCCGAGAAAATGTTTGTAATAATGATGTTTATCAGTTGTACAT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169970365 475 + 171630274 tcatctgAGTATGTCTTTATTTACAGTTTAAAGTTCTTCTCATTTGACAGTTAAGAGGTATAAAAAAAACAAGAAAaaaaatattgggctagttctttctggctttcattatttcagatggtaaatccactatattctaattgctgttcaaccacagataatgtgtttttttctggcc-atttcaagatg-tttttctttgttttcaTTACCTATAGGTGTGTGCTGTGCTGTGGGATTTGGCTCAAACCATCCTTCCCCTGTTAGTAGTGCACACATTAACTCAGTTACTCTGTGCATTGAGAAAAGTGCCTCTAAATATGAGTAAAGTTTTAAAAACCACTAAGGCATGGAAAGTCAGTGATCCACAGATTAGAGCATCATTCCATTGTGAAGCCTCTCTAAGGAAAAGCATCAAAGAGAAAAAGATAATGGACCGAGAAAATGGTTGTAGTAGTGATGTTTATCACCTGCACAT i calJac3.chr4 C 0 C 0 e canFam3.chr1 56234268 6455 + 122678785 I a score=2117934.000000 s hg38.chr6_KB021644v2_alt 181547 707 + 185823 ctacctgggcttggttctgccatt-ggttgagggtctggaaatgacgcctctgggtctccttcttgtatgggtaggggtatatcagatgccctgccac-----tgtgctca-tgttttcctcttttttagtccttaggtaccaaaccattttcacctttatccagccaccattcagagttctcctttggttgtttcttgcagtattttcagagtttctagtcatagttattggtgtgagcaggaagaaacaggtctatatcagcttgaacaggtcagaaattctgctaaAGCTATAGTCTCACAGAATGTCAGGGTTTATTTTAGCAAAAC-AAAAAATAGTGTATAAATCCTAATTGAGTGTACTGAAGGGAAAGAAGAAGAA---TTAAGAATAAAAATAATATCAAAGATTTATGTAGAGCTGACGTTGTGCTGGGCATACACACTTACACAT--ATGCATATGTGCTCTGTGACTGTAGGAATCTAGGTTCTGTCTtgctgagtattcctaaattaatatattgagacttaa----cctctttcttgaacttcaggcttgtatcagc--ttgcttcattaaagtctctattttgctacgtgaacacctcaaactcaacatgtccaaacc--actttccatcttccct-----gcacgctagttcctcctgcagatccctcacatttgttagtgatgacttctcccttccagccactccagtcagagatc s panTro4.chr6 170770462 702 + 172623881 ctacctgggcttggttctgccatt-ggctgagggtctggaaatgatgcctctgggtctccttcttgtatgggtaggggtatatcagatgccctgccac-----tgtgctca-tgttttcctcttttttagtccttaggtaccaaaccattt-cacctttatccagccaccattcagagttctcctttggttgtttcttgcagtattttcagagtttctagtcatagttattggtgtgagcaggaagaaacaggtctatatcagcttgaacaggtcagaaattctgctaaAGCTATAGTCTCACAGAGTGTCAAGGTTTATTTTAGCAAAAC-AAAAAATAGTGTATAAATCCTAATTGAGTATACTGAAGGGAAAGAAGAA-------TAAGAATAAAAATAATATCAAAGATTTATGTAGAGCTGACGTTGTGCTGGGCATACACACTTACACAT--ATGCATATGTGCTCCGTGACTGTAGGAAtctaggttccgtcttgctgactattcctaaattaatatattgagacttaa----cctctttcttgaacttcaggcttgtatcagc--ttgcttcattgaaatctctattttgctaagtaaacacctcaaactcaacatgtccaaacc--actttccatcttccct-----gcacactagttcctcctgcagatccctcacatttgttagtgatgacttctcccttccagccactccagtcagagatc i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172530272 706 + 174210431 ctacctgggcttggttctgccatt-ggttgggggtctggaaatgatgcctctgggtctccttcttgtatgggtaggggtatatcagatgccctgctgc-----tgtgctca-tgttttcctcttttttagtccttaggtaccaaaccattt-cacctttatccagccaccattcagagttctcctttggctgtttcttgcattattttcagagtttctagttgtagtta-tggtatgagcaggaagaaacaggtctgtatcagcttgaacaggtcagaaattctgctaaAGCTATAGTCTCACAGAATGTCAAGGTTTATTTTAACAAAACAAAAAAATAGTGTACAAATCCTAATCAAGTATACTGAAGGGAAAGAAGAAGAA---TTAAGAATAAGAATAATATCAAAGATTTAGGCAGAGCTGACATTGTGCTGGGCATACACGCTTACGCAC--ATGCGTATGTGCTCCCTGATTTTAGGAATCTAGGTTCTGTCTtgctgattattcctaaattaatatattgagacttaa----cctctttcttgaacttcaggcttgtatcagc--ttgcctcattaaagtctctattttgctatgtaaacagctcaaactcaacatgtccaaacc--actttctatcttccct-----gcacaccaattcgtcctgcagatccctcacatttgttagtgatgacttctcccttccagctactctggtcagagatc i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156387453 705 + 157873769 ctacctggacttggttctgccatt-ggttgggggtctggaaatgatgcctctgggtctccttctcatatgggtaggggtacatcagatgccctgccac-----ttggctca-tgttttcttcttttttagtccttaggtaccaaaccattt-catctttatccagccaccattcagagttcccctttggttgtttcttgcattattttcagggtttctagttgtagttattggtatgagcaggaagaaacaggtctatatcagcttgaacaggtcagaaattctgctaaCGCTACAGTCTCACAGAATGTCAAGGTTTATTTTAGCAAAAC-AAAAAATAGTGTATAAATCCTAATCGAGTATACTGAAGGGAAAGAAGAAGAA---TTAAAAATAAGAATAATACCAAAGATTTATGTAGAGCTGACGTTGTCCTGGGTGTACACACTTACGGAC--ATGCATATGTGCTCC-TGATTGTAGgactctaggttccgtcttgctgattattcctaaattaatatattgacacttaa----cctctttcttgaacttcaggcttgcatcagc--ttgcctcattgaagtctctattttgctacgtaagcagctcaaactcaacatatccgaacc--actttccatcttccct-----gcacaccagttcctcctgtagatccctcacatttgttagtgatgacttctcccttccagctactccgatcagagatc i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168202935 710 + 169853907 ctacctgggtttggttctgccatt-ggttggggctctggaaatggtgcctctgggtctccgtcttgtatgggtaagggtatatcagatgccctgctgc-----tgtgctca-tgttttcctcttttttagttcttaggtaccaaaccattc-cacctttatccagccaccattcagagtcctcctttggttgtttcttgcgttattttcagagtttctagttgtagttattggtataagcaggaagaaacaggtctatataagcttgAACCGGTCAGAAATTCTGCTAAAGCTACAGTCTCACAGAATGTCAAGGTTTATTTTAGCAAAAC-AAAAAATAGTGTATAAATCCTAATCAAGTATACTGAAGGCAAAGAAGAAGAAGAATTAAGAATAAGAATAATATCAAAAGTTTATGTAGAGCTGATGTTGTGCTGGGCATACACACTTACGCAC--ATGCATATGTGCTCCCTGATTGTAGGAATCTAGGTTccatcttgctga-tattcttaaattaatacattgagacctaa----cctctttcttcaacttcaggcttgtatcagcttttgcctcattaaagtctctattttgctacgtaaacagttcagactcaacatgtccaaacc--actttccatcttccct-----gcacaccagttcctcctgcaaatccctcacatttgttagtgatgacttctcccttccagctactccggtcagagatc i rheMac3.chr4 C 0 I 730 s macFas5.chr4 169157371 710 - 170955103 ctacctgggtttggttctgccatt-ggttggggctctggaaatggtgcctctgggtctccgtcttgtatgggtaagggtatatcagatgccctgctgc-----tgtgctca-tgttttcctcttttttagttcttaggtaccaaaccattc-cacctttatccagccaccattcagagtcctcctttggttgtttcttgcgttattttcagagtttctagttgtagttattggtataagcaggaagaaacaggtctatataagcttgAACCGGTCAGAAATTCTGCTAAAGCTACAGTCTCACAGAATGTCAAGGTTTATTTTAGCAAAAC-AAAAAATAGTGTATAAATCCTAATCAAGTATACTGAAGGCAaagaagaagaagagttaagaataagaataaTATCAAAAGTTTATGTAGAGCTGATGTTGTGCTGGGCATACACACTTACGCAC--ATGCATATGTGCTCCCTGATTGTAGGAATCTAGGTTccatcttgctga-tattcttaaattaatacattgagacctaa----cctctttcttcaacttcaggcttgtatcagcttttgcctcattaaagtctctattttgctacgtaaacagttcagactcaacatgtccaaacc--actttccatcttccct-----gcacaccagttcctcctgcagatccctcacatttgttagtgatgacttctctcttccagctactccggtcagagatc i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163973577 710 + 165299245 CTACCTGGGTTTGGTTCTGCCATT-GGTTTGGGCTCTGGAAATGGTGCCTCTGGGTCTCCTTCTTGTATGGGTAGGGGTATATCGGATGCCCTGCTGC-----TGTGctca-tgttttcctcttttttagtTCTTAGGTACCAAACCATTC-CACCTTTATCCAGCCACCATTCAGAGTCCTCCTTTGGTTGTTTCTTGCGTTATTTTCAGAGTTTCTAGTTGTAGTTATTGGTATAAGCAGGAAGAAACAGGTCTATATAAGTTTGAACCGGTCAGAAATTCTGCTAAAGCTACAGTCTCACAGAATGTCAAGGTTTATTTTAGCAGAAC-AAAAAATAGTGTATAAATCCTAATCAAGTATACTGAAggcaaagaagaagaagaattaagaataagaataatatcGAAAGTTTATGTAGAGCTGATGTTGTGCTGGGCATACACACTTACGCAC--ATGTATATGTGCTCCCTGATTGTAGGAATCTAGGTTCCATCTTGCTGA-TATTCTTAAATTAATACATCGAGACCTAA----CCTCTTTCTTCAACTTCAGGCTTGTATCAGCTTTTGCCTCATTAAAGTCTCTATTTTGCTACGTAAACAGTTCAGACTCAACATGTCCAAACC--ACTTTCCATCTTCCCT-----GCACACCAGTTCCTCCTGCAGATCCCTCACATTTGTTAGTGATGACTTCTCCCTTCCAGCTACTCTGGTCAGAGATC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96758794 700 + 98384682 ctacctgggtttggttctgccatt-ggttgggggtctggaaatggtgcctctgggtctccttcttgtatgggtaggggtatattggatgccctgctgc-----tgtgctca-tgttttcctcttttttactccttaggtaccaaaccattc-cacctttatccagccaccattcagagttctcctttggttgtttcttgcgttattttcagagtttctagttgtagttattggtataag----------cagatctatataagcttGAACCGGTCAGAAATTCTGCTAAAGCTACAGTCTCACAGAATGTCAAGGTTTATTTTAATAAAAC-AAAAAATAGTGTATAAATCCTAATCAAGTATACTAAAGGGAAAGAAGAAGAAGAGTTAAGACTAAGAATAATATCAAAGGTTTATGTAGAGCTGATGTTGTGCTGGGCATACACACTTACGCAC--ATGCATATGTCCTCCCTGATTGTAGAAATCTAGGTTccatcttgctga-tattcctaaattaatacatcgagacctaa----cctctttcttgaacttcaggcttgtatcagcttttgcctcattaaagtctctattttgctacataaacagttcagactcaacatgtccaaacc--actttccatcttccct-----gcacaccatttcctcctacagatccctcacatttgttagtgatgacttctcccttccagctactccagtcagagatt i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169970840 682 + 171630274 ctacctgggctttgttctggcatt-gcctgggggcctggatatgactcctct-ggtctcctccctgtatgggtgggggtatatcagatgcccggatactgctatgtactcattttttttctcttttttagtccttaggtaccaaaccattt-cacc----tctagccaccattcagagttctccttcaattgtttctcacactattttccgagtttctagttgtacttattggtatgaacaggaagaaacaggtctataacatcttgaatggatcagaaatTCT------GCTATAGTCTCACAGAATGCCAAGGTTTATTTTAGTAAAA--AAAAATAACTGTATAAATCCTAATCCAGTGTACCAAAGGAAAAGAAGAA------CTAAAAATAAGAATACCGTCGAAGGTTTGTACAGAGCGGACGTCACGCGGGGCCTACACACTTACGCAC--GTGCATGTGTGCCCT-GGATTGTAGGAAtctaggttccatcttgctgattattcctcaatgaatgtattgagacccaa----cctcttcctcaaacttcaggcttatatcaga--ttgcctcattaaagcctctattttgctacctacacagctcagactcagcatg---aaacc--actctccatcctctcc-----gcaaaccagctccccctgcaggg-------atttgct----atggcttctcctgtgcagacgctcagggcagagatc i calJac3.chr4 C 0 C 0 s canFam3.chr1 56240723 651 + 122678785 ctactttgtttt--ttctggtgttgggcttggagtctggaaat-----------------tcttcagattagtgggggtaaataagatgccc-----------tctgctca-gctgttcctc-----cagtgctagggtaacaaatcaccc--------------------------atcttgctctggtcccttgctgca-taacttcagagtttcccattgtacttcatggtgacagcaggaagaagcaagtctatgccatcttgtccagatcagaagttctgtttaaGTTATGGTCTTACATAAATTCAAGGTAAAAGTCAGCAAAAG-AATAGAGGG---ACAAATCCTAAATCAGAAGAATGAAGGAAAAGAGAGA-----------ATTAAGGACAATATCAACCACTTATAGGGTGCCGAC--TACACTAGGCATACACTGTTACATACAAATCCACCTGCACTCCCAACtcttatggatttagtttccatctcactgactattccaaagttcatatcataagacccaggatttttttttcttgaactccaggattgtatggaa--attcctcactgaaacttctgcttggacctaaaaatagttcgaacttaatatgtccaaacctaaactgtgatcttctccccaaaccacgccaaccccttgtatggacatctcacatgtgttagtgaccacatctgccttccaggtgctcaggtcatacttc i canFam3.chr1 I 6455 C 0 a score=2550540.000000 s hg38.chr6_KB021644v2_alt 182254 858 + 185823 ctggagtcgccttttgatgcctctccttatctcattactcagatccaat-cattggcaagtccagttggtgctaccgtcagagcatatcaagaatctaacctctcctttgcattatt-----------ccagct---agccatctt------cttaggctgtt-------------g----tccctctcatttgatgatggtagcagcctcctaatatgatcctgcttcaccggtttctctcttctgcccttttcaacacatcagccagaaggaccttgtt--aagtctgagtcggatgcagtccctctcctgac-tgtgtctcctacggcttcccactccatcagggtgaaatctcttgcagggttttcaagatctcgtgtaat---acatcc------cacaacctctccttctctatctAAtgctggccgtgtcctgtccgccagtctcagagagctctccgttcttc-cccac-tgctacgtg-ccaggaggctgaacctcatgacctttaggtgcaggctccttgctttccgttttcagctggctttagaactggaaacaccaggaggaagtcaggatgtgggagaagggtgaagctggggaagtctctctttctcccttctcctcggccaggtgttggcaagggttgctcttctttgtgtccacagatcctgtccagtgggctccctacagcccaggcaggctcttgcggggctccatggttatacctcgccttgcttcaggccaagggtttggaatgg-ttTGCTT---AACTGATCACACCTCCATACTTCTCTTTTGAATGTGCCATC-----TGCTT--CCTGCTAGGGCACTTATTTTCTTGCTATGCACCTGCCTGTTGTTGTTTTCGTGGC-CTGGCCAGGTGGTCCTCCTTCCTATCACTTTAACAACA s panTro4.chr6 170771164 857 + 172623881 ctgaagtcaccttttgatgcctctccttatctcattactcagatccaat-cattggcaagtccagttggtgctaccgtcagagcatatcaagaatctaacctctcctttgcattatt-----------ccagct---agccatctt------cttaggctgtt-------------g----tccctctcatttgatgatggtagcagcctcctaatatgatcctgcttcaccggtttctctcttctgcccttttcaacacatcagccagaaggaccttgtt--aagtctgagtcggatgcagtccctctcctgac-tgtgtctcctacggcttcccactccatcagggtgaaatctcttgcagggttttcaagatctcgtgtaat---acatcc-------acaacctctacttctctATCTAAtgctggccgtgtcctgtccgccagtctcagagagctctccgttcttc-cccac-tgctacgtg-ccaggaggctgaacctcatgacctttaggtgcaggctccttgctttctgttttcagctgggtttagaactggaaacaccaggaggaagtcaggatgtgggagaagggtgaagctggggaagtctctccttctcccttctcctcggccaggtgttggcaagggttgctcttctgtgtgtccacagttcctgtccagtgggctccctacagcccaggcaggctcttgtggggctccatggttattactcgccttgcttcaggccaagggtttggaatgg-ttTGCTT---AACTGATCACACCTCCATACTTCTCTTTTGAATGTGCCATC-----CGCCT--CCTGCTAGGGCACTTATTTTCTTGCTATGCACCTGCCTGTTGTTGTTTTCGTGGC-CTGGCCAGGTGGTCCTCCTTCCTATCACTTTAACAACA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172530978 849 + 174210431 ctggagtcatcttctgatgcctctccttatctcattac-----tccaat-catcagcaagtccagttggtgctaccatcagaacatatcaagaatctaacctctcctttgcattatt-----------ccagct---agccatctt------cttaggccgtt-------------g----tccctctcatttgatgacggtaacagcctcctaatgtgatcctgcttcccccatttctctcttctgcccttttcaatacatcagccagaaggaccttgtt--aagtctgagtcggatggagtccctctcctgac-tgtgtctcctacggcttcccactccatcagggtgaaatctcttgcagggttttcaggatctcgtgtaat---acaccc------cacaacctctcCTTCTCTATCTAAtgctgggtgtgtcctgtctgccagtctcagagagctctccattcttc-cccac-tgctacgtg-ccaggaggctgaacctcatgacctttaggtgcaggctccttgctttctgttttcggctgggtttagaactggaaacaccaggaggaagtcgggatgtgggagaagggtgaagctggggaagtctctctttctcccttcttctcggccacgtgttggcaagggctgctcttccgtgtgtccacagatcctgtccagtgggctccccacagcc----caggctcttgcggggctccatggttatacctcgccttgcttcaggccaagggattggaatgg-tttgctt---cactgATCACACCTCCATACTTCTCTTTTGAACGTGCTATC-----TGCTT--CCTGCTAGGGCACTTATTTTCTTGCTACGCACCTCCCTGTTGTTGTTTTCGTGGC-TTGGCCAGGTGATCCTCCTTCCTATCACTTTAACAACA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156388158 843 + 157873769 ctggagtcgtcttctgatgcctctct--------ttactcagatccaat-catcagcaagtccagttggtgctaccgtcagaacatatcaagaatctaacctctcctttgcattatt-----------ccagct---agccatctt------cttaggccgtt-------------g----tccctctcatttgatgaaggtagcagcctcctaatgtgatcctgcttcacccgtttctctcttctgcccttttcaacacatcagccagaaggcccttgtt--aagtctgagtcagatgcagtccctctcctgac-tgtgtctcctatggcttcccactccatcagggtgaaatctcttgcagggttttcaagatctcgtgtaat---acaccc------cacaacctctccttctctatctAATGCTGGGCGTGTCCTGCCTGCCAGTCTCAGAGAGctctccatttttc-cccac-tgctacata-ccaggaggctgaacctcatgacctttaggtgcaggttccttgctttctgttttcggctgagtttagaactggaaataccaggaggaagtggggatgtgggagaagggtgaagctggggaagtctctctttctcccttctcctcggccaggtgttggcaagggctgctcttctgtgtgtccacagatcctgtccagtgggctccctacagcc----caggctcttgtggggctccatggttatacctcgccttgcttcaggccaagggtttggaatgg-ttTGCTT---AACTGATCACACCTCCATACTTCTCTTTTGAAAGTGCCATC-----TGCTT--CCTGCCAGGGCACTTATTTTCTTGCTGTGCACCTCCC---TCTTGTTTTCGTGAC-CTGGCCAGGTGGTCCTCTTTCCTATCACTTTAACAACA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168204375 851 + 169853907 ctggagtcatcttctgatgcttctccttatctcatcactcagatccaat-catcaccaagccctgttggtgctaccgtcagaacatatcaagcatctaacctctcctttgcattttt-----------ccaact---agccgtctt------cttaggccatt-------------g----accctcttattggatgatggtagcagcctcctaatgttatcttgcttcacccatttctctcttctgcccttttcaacacatcagccagaaggaccttttt--aagtctgagtcagacgcagtccctctcctgac-tgtgtctcctacaacttcccactccagcagggtgaaatcccttgcagggttttcaagacctcatgtaat---acaccc------cacgaactctc---ctccatctAAtgctgtgcatgtcctctctgcccgtctcagagagctctccattcttc-cccac-tgctacgtg-ccagaaggctgaacctcatgatcttcaggtgcaggctccttgctttctgttttctgctgggtttagaactggaaacaccaggaggacctcgggatgtgggagaagggtgaagctggggaagtctctctttctcccttctcctcggccaggtattggcaagggctgctcttctgtgtgttcacagatcctgtccagtaggcaccctacagca----caggctcttgtggggctccatggttatacctcgccttgcttcaggccaagggtttggaatgg-ttTGCTT---AACTGATCACACCTCCACACTTCTCTTTTGAATGTGCCATC-----TGCTT--CCTGCTAGGGCACTTATTTTCTTGCTATGCACCTCCCTATTGCTGTTTTCATGGC-CTGGCCAGGTGGTCCTCTTTCCTATCACTTTAACAACA i rheMac3.chr4 I 730 C 0 s macFas5.chr4 169158081 851 - 170955103 ctggagtcgtctcctgatgcttctccttatctcatcactcagatccaat-catcaccaagccctgttggtgctaccgtcagaacatatcaagcatctaacctctcctttgcattttt-----------ccaact---agccatctt------cttaggccatt-------------g----accctcttattggatgatggtagcagcctcctaatgttatcttgcttcacccatttctctcttctgcccttttcaacacatcagccagaaggaccttttt--aagtctgagtcagacgcagtccctctcctgACTTGTGTCTCCTAAGACTTCCCGCTCCAGCAGGGTGAAATCTGTTGCTGGGTTTTCAAGACCTCATGTAAT---ACACCC------CACGAACTCTC---CTCCATCTAAtgctgtgcatgtcctctctgcccgtctcagagagctctccattcttc-cccac-tgctacgtg-ccagaaggctgaacctcatgatcttcaggtgcaggctccttgctttctgttttctgctgggtttagaactggaaacaccaggaggacttcaggatgtgggagaagggtgaagct-gggaagtctctctttctcccttctcctcggccaggtgttggcaagggctgctcttctgtgtgttcacagatcctgtccagtgggcaccctacagcc----caggttcttgtggggctccatggttataccttgccttgcttcaggccaagggtttggaatgg-ttTGCTT---AACTGATCACACCTCCACACTTCTCTTTTGAATGTGCCATC-----TGCTT--CCTGCTAGGGCACTTATTTTCTTGCTATGCACCTCCCTATTGCTGTTTTCATGGC-CTGGCCAGGTGGTCCTCCTTCCTATCACTTTAACAACA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163974287 851 + 165299245 CTGGAGTCATCTTCTGATGCTTCTCCTTATCTCATCACTCAGATCCAAT-CATCACCAAGCCCCGTTGGTGCTACCGTCAGAACATATCAAGCATCTAACCTCTCCTTTGCATTTTT-----------CCAACT---AGCCATCTT------CTTAGGCCATT-------------G----TCCCTCTCATTGAATGATGGTAGCAGCCTCCTAAAGTTATCCTGCTTCACCCATTTCTCTCTTCTGCCCTTTTCAACACATCAGCCAGAAGGACCTTTTT--AAGTCTGAGTCAGACGCAGTCCCTCTCCTGAC-TGTGTCTCCTACAACTTCCCACTCCAGCAGGGTGAAATCCCTTGCAGGGTTTTCAAGACCTCATGTAAT---ACACCC------CACAACCTCTC---CTCTATCTAAGGCTGTGCATGTCCTCTCTGCCCGTTTCAGAGAGCTCTCCATTCTTC-CCCAC-TGCTAGGTG-CCAGGAGGCTGAACCTCATGACCTTTAGGTGCAGGCtccttgctttctgttttctgctgGGTTTAGAACTGGGAACACCAAGAGGACCTCGGGATGTGGGAGAAGGGTGAAGCTGGggaagtctctctctctcccttctcctcggCCAGGTATTGGCAAGGGCTGCTCTTCTGTGTGTTCACAGATCCTGTCCAGTGGGCACCCTACAGCA----CAGGTTCTTGTGGGGCTCCATGGTTATACCTCGCCTTGCTTCAGGCCAAGGGTTTGGAATGG-TTTGCTT---AACTGATCACACCTCCACACTTCTCTTTTGAACGTGCCATC-----TGCTT--CCTGCTAGGGCACTTATTTTCTTGCTATGCACCTCCCTGTTGTTGTTTTCATGGC-CTGGCCAAGTGGTCCTCCTTCCTATCACTTTAACAACA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96759494 851 + 98384682 ctggcgtcgtcttctgatgcttctccttatctcatcactcagatccaat-catcaccaagccccgctggtgctaccgtcagaacatatcaagcatctaacatctcctttgcattttt-----------ccaacc---agccatctt------cttaggccatt-------------g----accctcttattggatgatggtagcagcctcttaatgttatcctgcttcacccatttctctcttctgcccttttcaacacatcagccagaaggaccttttt--aagtctgagtcagacgcagtcgctctcctgac-tgtgtctcctacgacttcccactccagcagggtgaaatctcttgctgggttttcaagacctcgtgtaat---acaccc------cacaacctctc---CTCTATCTAAtgctgtgcatgtcctctctgcccgtctcagagagctctccattcttc-gccac-tgctacgtg-ccaggaggctgaacctcatgagctttaggtgcaggctccttgctttctgttttctgctgggtttagaactggaaaggccaggaggacctcgggatgtgggagaagggtgaagctggggaagtctctctttctcccttctccccagccaggtattggcaaaggctgctcttctgtgtgttcacagttcctgtccagtgggcaccctacagcc----caggctcttgtggggttccatggttatacctcgcgttgcttcaggccaagggtttggaatgg-ttTGCTT---AACTGATCACCCCTCCACACTTCTCTTTTGAACGTGCCATC-----TGCTT--CCTGCTAGGGCACTTATTTTCTTGCTATGCACCTCCCTGTTGTTGTTTTCATGGC-CTGGCCAGGTGGTCATCCTTCCTATCACTTTAACAACA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169971522 840 + 171630274 gtggagtcgtcttctgaagcctcccttcatctcatcactcagatccaat-cgtcagcaagcccagttggtgctaccgtcagaacctatcaagactgtcacctctcctttgcatgttt-----------ctggcc---agccgtctt------cttaggctgttgtcccaggtcgtcg----tccctctcacttgatcactgtagcagcatcctcatgtggtcctgcttcaccagtt--tcctttctg--cttctcaacacatcagccggaaggaccttgtt--aaatccaagtcggatgcagtccctctcctgac-tgtgtctcctacagcttcccccttgatcagggtgaaatctcttgcagggttttcaagacctca--taat---ACACAC------CACGACCTCTC---C----TCTAACGCTGAGCGTGCtctgcctgcccctttcagagagctctccattcttc-cccac-tgctacgtg-ccaggagggtgaatctcgtgacctttaggtgcaggctccttgctttctgtttttggctgggtttagaactggaaacgccaggattaagttgggatgtgggag-agggagaagctggggaagtttcattctttcccttctcc-----------ttggcaagggctgcTTCCCAGTGTGTCCACAGATCC-ATCCAGTGGGCTCCCTAAGACC----CAGGCTCTTGCTGGGGTCCGTGGCTATACCGCCCCTTGCTTCAGGCCAACAGGCTGGGATGG--CTGCTT---GGCTGATTGCACCTCCATGCTTCTCCTTTTGATGTGCCACC-----TGCTT--CCTGCTAGGGCACCTACTTTCTTGCTACACACCTCCCTGTTGTTTTCTTCGTGGC-CCGGCCCGGTGGTCCTCCTTCCTAATGCTTTAACAACA i calJac3.chr4 C 0 C 0 s canFam3.chr1 56241374 837 + 122678785 -cggagccaccgtctg--gttcctccatccctcatcacacagatccagtccatccataaatctagct-gtgctgtcactaaagcatgtcaagaatctgactacatctctgaattttcagtgctgacaaccaactccaagctgtcctgggcacctccggatgtc-------------gcaactgtcttccatttaattagtgtgatgaaccctgaatgttcttctccttgcctc------ttcctctgacctcactgacacagtcgccagaatgatctccctggaagt-taagtcagatgcactcactctcctgat-gagggctcttctgacttccc-cttctctggaggaaaatccattacagtgcctgcaagactttgtgtactctcaccccccCCACACACAACCTCTC---TTGTTCCTtatgctggatatttcctgcttgtccatcttgttcaactccccactctttgcccacgtgttttgtgcccaggaggctgacctttatgacctgtatttatagggtccctttcctctggttt-------gatta-aatgggtgataccagcgggaagtaaggatgc-ggagacgagcacaggtggg---------CTGTTGTCCTTACTCTTGGTCAGGATTTGGCAGGACCTCCC----------------GAT---GCCCCATGACTCACCAGAAGCC----GTGGGTCTCACTGGGCTCAGTAACTGTGTCTGTCCTTTCTCC---TTCAGATCTTGGCATAGATTTACCTTGAATCTGACCACATCTTCATATCCCTTTTTTGTATATGCCATCTTTGTTACTTAGTTTGCTGGGGCCCTGTGTTTGCTATTGTGCCCCT---------TGTCATCTTGGCTCTGGCCAAGTAGTCCTCTTTCCTA----TTTAACACCA i canFam3.chr1 C 0 I 73 a score=387849.000000 s hg38.chr6_KB021644v2_alt 183112 131 + 185823 AGCATGAAtttgaagttgccatcatttctacctagaatgtgcttccagatatccatgtgcatcactctccaggcttcctAAACAGAAGGATCGAGTGTTgtgggtagtgactaactgggggcagtggtgca s panTro4.chr6 170772021 131 + 172623881 ACCATGAAtttgaagttgccatcatttctacctagaatgtgcttccagatatccatgtgcatcactctccaggcttcctAAACAGAAGGATCGAGTGTTgtgggtagtgactaactgggggcagtggtgca i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172531827 131 + 174210431 AGCATGAATTTGAAGTTGCCATAATTTCTACCTGGAATGTGCTTCCAGATATCCATGTGCATCACTCTCCAAGCTTCCTAAACAGAAGGATCGAGTGTTgtgtgtagtgactaactgggggcagtggtgca i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156389001 131 + 157873769 AGCATGAATTTGAAGTTGCCATCATTTTTACCTGGAATGTGCTTCCAGACATCCATGTGCATCACTCTCCAGGCTTCCTAAACAGAAGGATCGAGTGTTgtgcacagtgactaactgggggcagtggtgca i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168205226 131 + 169853907 AGCATGAATTTGAAGTTGTCATCATTTCTACATGGAATGCACTTCCAGACATCCATGTGCATCACTCTCCAGGCTTTCTAAACAGAAGGATCGAGTGTTgtggacagtgactaactggggacagtggtgca i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169158932 131 - 170955103 AGCATGAATTTGAAGTTGTCATCATTTCTACATGGAATGCACTTCCAGACATCCATGTGCATCACTCTCCAGGCTTTCTAAACAGAAGGATCGAGTGTTgtggacagtgactaactggggacagtggtgca i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163975138 131 + 165299245 AGCATGAATTTGAAGTTGTCATCATTTCTACGTGGAATGCACTTCCAGACATCCATGTGCATCACTCTCCAGGCTTTCTAAACAGAAGGATTGAGTGTGGTGGATAGTGACTAACTGGGGACAGTGGTGCA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96760345 131 + 98384682 AGCATGAATTTGAAGTTGTCATCATTTCTACATAGAATGCGCTTCCAGACATCCATGTGCATCACTCTCCAGGCTTTCTAAACAGAAGGATTGAGGGTTgtggatagtgactaactggggacagtggtgca i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169972362 127 + 171630274 AGCATGAATTTGAAGTTGCCATCATTTCTGCCTGGAATGTACTTCCATATATCCATGGGCAGCACTCTCCAGGCTTCCTA---AGAAGGATCGAGGGTTGTGGGTGGTGACTAGCTGGGG-CAGCGGTGCA i calJac3.chr4 C 0 I 1396 e canFam3.chr1 56242211 73 + 122678785 I a score=112964.000000 s hg38.chr6_KB021644v2_alt 183243 49 + 185823 tacagtaaagggatttacaaaggcagtttacc----------------------tttacctacaaggtaaa s panTro4.chr6 170772152 49 + 172623881 tacagtaaagggatttacaaaggcagtttact----------------------tttccctacaaggtaaa i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172531958 49 + 174210431 tacaataaagggatttacaaaggcagtttacc----------------------tttacctacaaggtaaa i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156389132 71 + 157873769 tacagtaaagggatttacaaaggcagtttacctttacctacaaggtaaagaaagtttacctacaaggtaaa i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168205357 49 + 169853907 tacagtaaaggaatttacaaaggcagtttacc----------------------tttacctacaaggcaaa i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169159063 49 - 170955103 tacagtaaaggaatttacaaaggcagtttacc----------------------tttacctacaaggcaaa i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163975269 49 + 165299245 TACAGTAAAGGaatttacaaaggcagtttacC----------------------TTTACCTACAAGGCAAA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96760476 49 + 98384682 tacagtcaaggaatttacaaaggcagtttacc----------------------tttacctacaaggcaaa i chlSab2.chr13 C 0 C 0 e calJac3.chr4 169972489 1396 + 171630274 I e canFam3.chr1 56242211 73 + 122678785 I a score=996861.000000 s hg38.chr6_KB021644v2_alt 183292 346 + 185823 ggaaggtggatttgttaaagaaagtatgaaaatatgttgcaaggatgcaatgggtagatcagcaagaaaggagctgagttccaggagacaaaagcttgctgggtattttacaggatggtgcttgtgctggagaggaatacgtgcagtactggtaacactaagattgcagtgagcgaacctgcatttttctgtcagctgaggtgtctgctggtaagtcaggcatagggagattgtgtgttaga-tgggctatttgcgcaggagggctgtgtgtcctggaccatgaagaaaggcagatttgtagtttatctgctttgtctttttgctttccctgctccccctag--------------------cctgg s panTro4.chr6 170772201 346 + 172623881 gaaaggtggatttgttaaagaaagtatgaaaatatgttgcaaggatgcaatgggtagatcagcaagaaaggagctgagttccaggagacaaaagcttgctgggtattttacaggatggtgcttgtgctggagaggaatacgtgcagtactggtaacactaagattgcagtgagcgaacctgcatttttctatcagctgaggtgtctgctggtaagtcaggcatagggagattgtttgttaga-tgggctatttgcgcaggagggctgtgtgtcctggaccatgaagaaaggcagatttgtagtttatctgctttgtctttttgctttccctgctccccctag--------------------cctgg i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172532007 346 + 174210431 gaaaggtggatttgttaaagaaagtatgaaaatacattgcaaggatgcaatgggtagatcagcaagaaaggagctgagttccaggagacaaaaccttgctgggtattttacaagatggtgcttgtgctggagagggatacgtgcagtactggtaacacgaagattgcagtgagtgaacttgcatttttctatcagctgaggtgtctgctggtaagtcaggcatagggagattgtgtgtgaga-tgggctatttgcgcaggagggctgtgtgtcctggaccatgaagaaaggcagatttgtagtttatgtgctttgtcttcttgctttccctgctccccctag--------------------cctgg i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156389203 345 + 157873769 gaaaggtggacttgttaaagaaagtatgaaaatacgttgcaaggatgcaatgggcagatcagcaagaaaggagctgagttccaggagacaaaaccttgctgggtgttttataggatggtgcttgtgctggagagggatatgtgcagtactggtaacactaagattgcagtgagcgaacttgcatttttcta-cagctgaggtgtctgctggtaagtcaggcatagggagattgtgtgttaga-tgggctatttgcacaggagggctgtgtgtcctggaccatgaagaaaggcagatttgtagtttatctgctttgtctttttgctttccctgctccccctag--------------------cctgg i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168205406 346 + 169853907 gaaaggaggatttattaaagaaagtatgaaaatatgttgcaaggatgcaatgggtagatcagcaagaaagatgctgagttccaggagacaaaagcttgctgagtattttataggatggtccttgtgctggagagggatatgtgcagtactggtaacactaagattgcagtgagctcacttgcatttttctatcagctgaggtgtctgctggtaagtcaggcatagggagattgtgtgttaga-tggactatttgtgcaggagggctgtgtgtcctgcaccatgaagaaaggcagatttataatttatctgctttgtctttttgccttccctgctccccctag--------------------cctgg i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169159112 346 - 170955103 gaaaggaggatttattaaagaaagtatgaaaatatgttgcaaggatgcaatgggtagatcagcaagaaagatgctgagttccaggagacaaaagcttgctgagtattttataggatggtgcttgtgctggagagggatatgtgcagtactggtaacactaagattgctgtgagctcacttgcatttttctatcagctgaggtgtctgctggtaagtcaggcatagggagattgtgtgttaga-tggactatttgtgcaggagggctgtgtgtcctgcaccatgaagaaaggcagatttataatttatctgctttgtctttttgccttccctgctccccctag--------------------cctgg i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163975318 346 + 165299245 GAAAGGAGGATTTATtaaagaaagtatgaaaatatgttGCAAGGATGCAATGGGTAGATCAGCAAGAAAGATGCTGAGTTCCAGGAGATAAAAGCTTGCTGAGTATTTTATAGGATGGTCCTTGTGCTGGAGAGGGATATGTGCAGTACTGGTAACACtaagattgcagtgagctcacTTGCATTTTTCTATCAGCTGAGGTGTCTGCTGGTAAGTCAGGCATAGGGAGATTGTGTGTTAGA-TGGACTATTTGTGCAGGAGGGCTGTGTGTCCTGCACCAcgaagaaaggcagatttataatttatctgctttgtctttttgctttccctGCTCCCCCTAG--------------------CCTGG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96760525 346 + 98384682 gaaaggaggatttattaaagaaagtacgaaaatatgttgcaaggatgcaatgggtagatcagcaaggaagatgctgagttccaggagacaaaagcttgctgggtattttataggatggtgcttgtgctggagagggatatgtgcagtactggtaacactaagattgctgtgagctcacttgcatttttctatcagccgaggtgtctgctggtaagtcaggcatagggagattgtgtgttagaccggactatttgtgc-ggagggctgtgtgtcctgcaccatgaagaaaggcagatttatagtttatctgctttgtctttttgccttccctgctccccctag--------------------cctgg i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169973885 358 + 171630274 gaaaggcagatttattcaaggaagtatgaaaatgcatggcaaggatgcaccgggcaggtcagcaagaaaggaggtgagttccaggagacgaaagcttgccgggtgttttataggacggtacttgtgct-gagaaggctacatgcagcactgataaca-gaagattgcagggagctaactggc-cttttccatcagcggaggtgtgtggc-gtaagtcgggagtagggagccggtgtgttaga-tgggctatttgcacaggagggctatgtatcctggaccatgaagaaaggcagacttgtggttgctctgctttctctc----ctttctctgctccccctttttctctccttcctctgatcccctgg i calJac3.chr4 I 1396 C 0 e canFam3.chr1 56242211 73 + 122678785 I a score=1178614.000000 s hg38.chr6_KB021644v2_alt 183638 373 + 185823 ctcctt----ttcctaatcaggaccccacaCCAGATCACACCCTCACTCCCAAG-TCTGGTCATTTTCTTTAAAGTTAGAATATATCCACTTCCCACCGCAATGCTCTGGGT------------------------------------------------------------TCCCTTTATCCTGGCTTACGTCACATAGAAAAGCGTAATTTATAACTTAACAAAAGTGA-GTAGCTAACGAAGAAAGCAGATCATACATGACACC---ATAAACTGTAAACAATAAAAGCTGAATTGGTAAAGATCTTCTAACTGGAAAGCCCCATACCGAGATGGTGttaaatgcatcgtttctataaatgctcatggtatttttataaggtggacacta---ttatttcatcttagaa---------------atcagcaa---agagag-----------------gctttgagaaaggaactaa s panTro4.chr6 170772547 373 + 172623881 ctcctt----ttcctaatcaggaccccacaCCAGATCACACCCTCACTCCCAAG-TCTGGTCATTTTCTTTAAAGTTAGAATATATCCACTTCCCACCGCAATGCTCTGGGT------------------------------------------------------------TCCCTTTATCCTGGCTTACGTCACATAGAAAAGCGTAATTTATAACTTAACAAAAGTGA-GTAGCTAAAGAAGAAAGCAGATCATACATGACACC---ATAAACTGTAAACAATAAAAGCTGAATTGGTAAAGATCTTCTAACTGGAAAGCCCCATACCGAGATGGTGttaaatgcatcgtttctataaatgctcatggtatttttataaggtggacacta---ttatttcatcttagaa---------------atcagcaa---agagag-----------------gctttgagaaaggaactca i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172532353 373 + 174210431 ctcctt----ttcctaatcaggaccccacaTCAGATCACACCCACACTCCCAAG-TTTGGTCATTTTCTTTAAAGTTAGAGTATATCCACTTCCCACTGCAATGCTCTGGGT------------------------------------------------------------TCCCTTTATCCTGGCTTAGTTCACACAGAAAAGCATAATTTATAACTTAACAAAAGTGA-GTAGCTAAAGAAGAAAGCAAATCATACATGACATG---ATAAACTGTAAATAATAAAAGCCGAACTGGTAAAGATCTTCTAACTGGAAAGCCCCATACTGAGATGGTGttaaatgtatcgtttctataaatgttcatggtatttttataagttggacacta---ctatttcatcttagaa---------------atcagcaa---agagag-----------------gctttgagaaaggaactaa i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156389548 373 + 157873769 ctcctt----ttcctaatcaggaccgcacaTCAGATCACACCCTCACTCCCAAG-TCTGGTCATTTTCTTTAAAGTTAGAATATATCCACTTCCCACTGCAATGCTCTGGAT------------------------------------------------------------TCCCTTTATCCTGGCTTACTTCATATAGAAAAGCATAATTTATAACTTAACAAAACTGA-GTAGCTAAAGAAGAAAGCAGATCATACATGACACC---ATAAACTGTAAACAATAAAAGCTGAATTGGTAAAGATCTTCTAACTGGAAAGCCCCATACCAAGATGGTGTCAAatgcatcgtttctataaatgttcatggtatttttataaggtggacagta---ttatttcatcttagaa---------------atcagtaa---ggagag-----------------gctttgagaaaggaactaa i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168205752 431 + 169853907 ctcctt----ttcctaatcaggaccccacaTCAGATAACACCCTCACTCCCAAG-GCTGGTCATTTTGTTTAAAGTTAGAATATATCCACTTCGCACTGCAATGCTCTAGATTCCCTTTATCTTTTTGTTTAAAGTTAGAATATATCCACTTCCCACTGCAATGCTCTGGAGTCCCTTTATCTTGGCTTACTTCACATAGAAAAGCATAATTTATAACTTAACAAAAGTGA-GTAGCTAAAGAAGAAAGCAGGTCATACATGACACC---ATAAACTGTAAACAATAAAAGCTGAATTGGTGAAGATCTTCTAACTGGAAAGCCCCATACTGAGATGGTGttaaatgcatcgtttctataaatgttcatggtatttttatgaggtggacacta---ttatttcatcttataa---------------atcagtaa-----acag-----------------gctttgagaaaggaattaa i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169159458 371 - 170955103 ctcctt----ttcctaatcaggaccccacaTCAGATAACACCCTCACTCCCAAG-GCTGGTCATTTTGTTTAAAGTTAGAATATATCCACTTCGCACTGCAATGCTCTAGAT------------------------------------------------------------TCCCTTTATCTTTGCTTACTTCACATAGAAAAGCATAATTTATAACTTAACAAAAGTGA-GTAGCTAAAGAAGAAAGCAGGTCATACATGACACC---ATAAACTGTAAACAATAAAAGCTGAATTGGTGAAGATCTTCTAACTGGAAAGCCCCATACTGAGATGGTGttaaatgcatcgtttctataaatgttcatggtatttttatgaggtggacacta---ttatttcatcttataa---------------atcagtaa-----acag-----------------gctttgagaaaggaattaa i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163975664 371 + 165299245 CTCCTT----TTCCTAATCAGGACCCCACATCAGATAACACCCTCACTCCCAAG-GCTGGTCATTTTGTTTAAAGTTAGAATATATCCACTTCCCACTGCAATGCTCTGGAG------------------------------------------------------------TCCCTTTATCTTGGCTTACTTCACATAGAAAAGCATAATTTATAACTTAACAAAAGTGA-GTAGCTAAAGAAGAAAGCAGGTCATACATGACACC---ATAAACTGTAAACAATAAAAGCTGAATTGGTAAAGATCTTCTAACTGGAAAGCCCCATACTGAGATGGTGTTAAATGCATCGTTTCTATAAATGTTCATGGTATTTTTATGAGGTGGACACTA---TTATTTCATCTTATAA---------------ATCAGTAA-----ACAG-----------------GCTTTGAGAAAGGAATTAA i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96760871 371 + 98384682 ctcctt----ttcctaatcaggaccccacaTCAGATAACACCCTCACTCCCAAG-GCTGGTCATTTTGTTTAAAGTTAGAATATATCCACTTCCCACTGCAACGCTCTAGAT------------------------------------------------------------TCCCTTTATCTTGGCTTACTTCACATAGAAAAGCATAATTTATAACTTAACAAAAGTGA-GTAGCTAAAGAAGAAAGCAGGTCATACATGACACC---ATAAACTGTAAACAATAAAAGCTGAATTGGTAAAGATCTTCTAACTGGAAAGCCCCATACTGAGATGGTGttaaatgcatcgtttctataaatgttcatggtatttttatgaggtcgacacta---ttatttcatcttataa---------------atcagtaa-----acag-----------------gctttgagacaggaattaa i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169974243 373 + 171630274 atcctt----ttcctacttaggaccccacaGCAGATAACACCCTCACTCCCAAG-TCTGATCGTTTCATTTAAAGTTCTAATAGAGCCACTTCCCACTGCAATACTCTGGAT------------------------------------------------------------TCCCTTTATCCTGGCTTACTTCACACAGAAAAGCATAATTTATAACTTAACAAAAGTGA-GCCGCTAGAGAATAAAGAAGCTCATATGTGACACC---ATAAACTGTGAACAATAAAAGCTGAGTTGGTAAAGATCTTCTAACTGGAaagccccatgctgagatgatgttaaatgcatcgtttctgtacatgttcatgggattcctatgaggtggacactg---ttatttcatcttggaa---------------atcagtaa---acagag-----------------gctttgagaagagaactaa i calJac3.chr4 C 0 C 0 s canFam3.chr1 56242284 385 + 122678785 CTCCTTGGGCTTTCCAAACACAACCAAACATCAGA-GACACCTTCATTCCCAAGTTTTAATCATTGTATTTAAAGTGGCAAT--ATCCACTTCTCACCCCAATGCTCCTGAG------------------------------------------------------------TCCCTGTATCCTGGCTTGTACTGCATAAAA---------CTACAACTT---AAGAGTGATGTAGCCA-------------GCTATTCCTGACACTGCAATAACCTGCAA-----GAAAGCTAAGTCTATTAAGA-CTTCTGACTCGAAAGCACCATACCCAGATG-TTTGTGatacattatttctataaatatgcatgccattcctatgagggagacactatgtttatttccctttagaaaaatgagtgggaaatatcagaaagggagacagaacatgaaagactcctaactctgggaaacgaactag i canFam3.chr1 I 73 I 184 a score=2035777.000000 s hg38.chr6_KB021644v2_alt 184011 634 + 185823 attgcccaagatcaaacagccagtaatgtcagggcagggattagaaAACTTTAACAATTATAAAATTTCATGAAACATGAAAATAAGGAATACATCCCTTCAAAGCAGCTATGAGATGTATGTATTAGAGCAAAGGAGCAGTGAAAGTT-ACTGCATATTTCTTGGCACTTAGTCCATGGATTGCTTT--CAGTGTTATGATTCCTCTGAGTCACAGAACCTGA---CAATTGTGA----GCACTGTTACTGCCCTAATTCCTGCAGCCTCAGCTGTGAA--ACTTTCAGTATTTTTCTTTTGTTTGTTGAGCCAGTTAT----------------------------TAAAAAAATGAACTACAACAGCTAATTCTTTCTGTTTATCTAAATGCTTGTCAAAATGCCTAAGCAGTGATTTGCCAGGTTTGGGAGTTATACGTGCTTATACATTTCAAATAAACTGTGGCAGC-GGCCTTAGCTTTTGTGGCTCCAGCAGGCGTAAGTGAGTGTGTGTGCTTT-CTCTCTCCGCATCTGCTGCTTGACATCTTTAATTTATTATTCCTGTTATATAACTTTGTTTTGGCGCTTGAACTTCCATTCCCATGACTTTATGTTGAAAAACAGTTTTAAATCTAGGATTTGCATTTCACCACAGTGATAGAGCCTGGTTA s panTro4.chr6 170772920 634 + 172623881 attgcccaagatcaaacagccagtaatgtcagggcagggattagaaAAATTTAACAGTTATAAAATTTCATGAAACATGAAAATAAGGAATACATCCCTTCAAAGCAGCTATGAGATGTATGTATTAGAGCAAAGGAGCAGTGAAAGTT-ACTGCATATTTCTTGGCACTTAGTCCATGGATTGCTTT--CAGTGTTATGATTCCTCTGAGTCACAGAACCTGA---CAATTGTGA----GCATTGTTACTGCCCTAATTCCTGCAGCCTCAGCTGTGAA--ACTTTCAGTATTTTTCTTTTGTTTGTTGAGCCAGTTAT----------------------------TAAAAAAATGAACTACAACAGCTAATTCTTTCTGTTTATCTAAATGCTTGTCAAAATGCCTAAGCAGTGATTTGCCAGGTTTGGGAGTTATACGTGCTTATACATTTTAAATAAACTGTGGCAGC-AGCCTTAGCTTTTGTGGCTCCAGCAGGCATAAGTGAGTGTGTGTGCTTT-CTCTCTCCGCATCTGCTGCTTGACATCTTTAATTTATTATTCCTGTTATATAACTTTGTTTTGGCGCTTGAACTTCCATTCCCATGACTTTATGTTGAAAAACAGTTTTAAATCTAGGATTTGCATTTCACCACAGTGATAGAGCCTGGTTA i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172532726 639 + 174210431 attgcccaagatcaaacagccagtaatgtcagggaagggattagaaAAACTTAACAATTATAAAATTTCATGAAACATGAAAATAAGGAATACATTCCTTCAAAGCAGCTATGAGCTGTATGTATTAGAGCAAAGGAGCAGTGAAAGTT-ACTGCATATTTCTTGGCACTTAGTCCATGGATTGCTTTCACAGTGTTATGATTCCTCTAAGTCACAGAAGCTGA---CAATTGTGA----GCATTGTTACTGCCCTAATTTCTGCAGCCTCAGCTGTGAAACACTTTCAGTATTTTTCTTTTGTTTGTTGAGCCAGTTAT---------------------------AAAAAAAAATGAACTACAACAGCTAATTCTTTCTGTTTATCTAAATGCTTGTCAAAATGCCTAAGCAGTGATTTGCCAGGTTTGGGAGTTATGCGTGCTTATACATTTTAAATAAACTGTGGCAGC-GGCCTTAGCTTTTGTGGCTCCAGCAGGCATAAGTGAGTGTGTGTGCTTT-CTTTCTCTGCATCTGCTGCTTGACATCTTTAATTTATTATTCCTGTTATATAACTTTGTTTTGGCGCTTGAACTTCCATTCCCATGACTTTATGTTGAAAAACAGTTTTAAATCTAGGATTTGCATTTCACCACAGTGATAGAGCCTGGTTA i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156389921 635 + 157873769 attgcccaagatcaaactgccagtaatgtcagggcagggattagaaAAATTTAACCATTATAAAATTTCATGAAACATGAAAATAAGGAATACATCCCTTCAAAGCAGCTATGAGCTGTATGTATTAGAGCCAAGGAGCAGTGAAAGTT-ACTGCATATTTCTTGGCGCTTAGTCCACGGATTGCTTTCACAGTGTTAATATTCCTCTAAGTCACAGAACCCGA---CAATTGTGA----GCATTGTTACTGCCCTAATTCCTGCAGCCTCAGCTGTGAAACACTTTCAGTATTTTTCTTTTGTTTGTTGAGCCAGTTAT----------------------------AAAAAAAATGAGCT---ACAGCTAATTCTTTCTGCTTATCTAAATGCTTGTCAAAATGCCTAAGCAGTGATTTGCCAGGTTTGAGAGTTATGGGTGCTTATACATTTTAAATAAACTGTGGCAGC-GGCCTTAGCTTTTGTGGCTCCAGCAGGCGTAAGTGAGTGTGTGTGCTTT-CTCTCTCTGCATCTGCTGCTTGACATCTTTAATTTATTATTCCTGTTATATAACTTTGTTTTGGCGCTTGAACTTCCATTCCCATGACTTTATGTTGAAAAACAGTTTTAAATCTAGGATTTGCATTTCACCACAGTGATAGACACTGGTTA i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168206183 650 + 169853907 attgcccaagatcaaacagccagtaacgtcagggcagggattagaaAAATTTAACAATTATAAAATTTCATGAAACATGAAAATAAGGAATACATCCTTTCAAAGCAGCTAGGAGCTGTATGTATTAGAGCAAAGGAGCAGTGAAAGTT-ATTGCATATTTCTTGGTACTTAGTCCACGGATTGCTTTCACAGTGTTATTATTCCTGTAAGTCACAGAACCTGA---CAGTTGTGA----GCATTGTTACTGCCCTAATTCCTGCAGCCTCAGCTGTGAAACACTTTCAATATTTTTCTTTTGTTTGTTGAGCCAGTTAT-----------------aaaaaaaaaaaaaaaaaaaagaaCTACCACAGCTAATTCTTTCTGTTTATCTAAATGCTTGTCAAAATGCCTAAGCAGTGATTTGCCGGGTTTGGGAGTTATGCGTGCATATACATTTTAAATAAACTGTGGCAACAGGCCTTAGCTTTTGTGGCTCCAGCAGGCGTGAGTGAGTGTGTGTGCTCT-CTCTCTCCGCATCTGCTGCTTGACATCTTTAATTTATTATTCCTGTTATATAACTTTGTTTTGGTGTTTGAACTTCCATTCCCATGACTTTATGTTGAAAAACAGTTTTAAATCTAGGATTTGCATTTCACCACAGTGATAGAGCCTGGTTA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169159829 655 - 170955103 attgcccaagatcaaacagccagtaacgtcagggcagggattagaaAAATTTAACAATTATAAAATTTCATGAAACATGAAAATAAGGAATACATCCTTTCAAAGCAGCTAGGAGCTGTATGTATTAGAGCAAAGGAGCGGTGAAAGTT-ATTGCATATTTCTTGGTACTTAGTCCACGGATTGCTTTCACAGTGTTATTATTCCTGTAAGTCACAGGACCTGA---CAGTTGTGA----GCATTGTTACTGCCCTAATTCCTGCAGCCTCAGCTGTGAAACACTTTCAATATTTTTCTTTTGTTTGTTGAGCCAGTTAT------------aaaaaaaaaaaaaaaaaaaaaaaaaGAACTACCACAGCTAATTCTTTCTGTTTATCTAAATGCTTGTCAAAATGCCTAAGCAGTGATTTGCCGGGTTTGGGAGTTATGTGTGCATATACATTTTAAATAAACTGTGGCAACAGGCCTTAGCTTTTGTGGCTCCAGCAGGCGTGAGTGAGTGTGTGTGCTCT-CTCTCTCCGCATCTGCTGCTTGACATCTTTAATTTATTATTCCTGTTATATAACTTTGTTTTGGTGTTTGAACTTCCATTCCCATGACTTTATGTTGAAAAACAGTTTTAAATCTAGGATTTGCATTTCACCACAGTGATAGAGCCTGGTTA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163976035 645 + 165299245 ATTGCCCAAGATCAAACAGCCAGTAACGTCAGGGCAGGGATtagaaaaatttaacaattataaaatttcatGAAACATGAAAATAAGGAATACATCCTTTCAAAGCAGCTAGGAGCTGTATGTATTAGAGCAAAGGAGCGGTGAAAGTT-ACTGCATATTTCTTGGTACTTAGTCCACGGATCGCTTTCACAGTGTTGTTATTCCTGTAAGTCACAGGACCTGA---CAGTTGTGA----GCGTTGTTACTGCCCTAACTCCTGCAGCCTCAGCTGTGAAACACTTTCagtacttttcttttgtttgttgagccagttat----------------------atatatataaaaaaagaactaccaCAGCTAATTCTTTCTGTTTATCTAAATGCTTGTCAAAATGCCTAAGCAGTGATTTGCCGGGTTTGGGAGTTACGCgtgcatatacattttaaataaactgtgGCAACAGGCCTTAGCTTTTGTGGCTCCGGCAGgcgtgagtgagtgtgtgtgctcG-CTCTCTCCGCATCTGCTGCTTGACATCTTTAATTTATTATTCCTGTTATATAACTTTGTTTTGGTGTTTGAACTTCCATTCCCATGACTTTATGttgaaaaacagttttaaatCTAGGATTTGCATTTCACCACAGTGATAGagcctggtta i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96761242 665 + 98384682 attgcccaagatcaaacagccagtaacgtcagagcagggattagaaAAATTTAACAATTATAAAATTTCATGAAACATGCAAATAAGGAATACATCCCTTCAAAGCAGCTAGGAGCTGTATGTATTAGAGCAAAGGAGCAGTGAAAGTT-ATTGCATATTTCTTGTTACTTAGTCCACGGATTGCTTTCACAGTGTTATTATTCCTGTAAGTCACCGAACCTGA---CAGTTGTGA----GCATTGTTACTGCCCTAATTCCTGCAGCTTCAGCTGTGAAACACTTTCAGTATTTTTCTTTTGTTTGTTGAGACAGTTaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagaaCTACCACAGCTAATTCTTTCTGTTTATCTAAATGCTTGTCAAAATGCCTAAGCAGTGATTTGCCGGGTTTGGGAGTTATGTGTGCATATACATTTTAAATAAAC--TGGCAACAGGCCTCAGCTTTTGTGGCTCCCACAGGCGTGAGTGAGTGTGTGTGCTTC-CTCTCTCCGCATCTGCTGCTTGACATCTTTAATTTATTATTCCTGTTATATAACTTTGTTTTGGTGTTTGAACTTCCATTCCCATGACTTTATGTTGAAAAACAGTTTTAAATCTTGGATTTGCATTTCACCACAGTGATAGAGCCTGGTTA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169974616 619 + 171630274 attgcccaaggtcacacagccagtaatgtcagggcagggattagaaAAATTTGACAATTATAAAATTTCATGAAATGTAAAAAAAAGGCGTGCATCCCTTCGAAGCAGCTACGAGCCGTATATATTAGTGCGAAGGCGCAGAGAAGGTG-ACTGCCTATTCCTTGGCATTTCGTCCACAGATTGCTTTCACAGAGTC---CTTCCTCCAAGTCGCAGAACCTGA---CAGTTGTGA----GCACCTTTGCAGCCCTAATTACTGCAGCCTCAGTGGTGAAACACTTTCAGTGTTTTACTTTTGTTTGCTGAGCCGGTTAT--------------------------ATGAAAAAAATGAACGATAACAGCCAATTCTTTCTGTTTATCTGAATGCTTGTCAAAATGCCTCAGCAGTGATTTGCAGGGTTTGGGAGTCCTGTGCGCTCGTGCATCCTAAATAAACAGAGGCTGC-G-------------------CAGCGCGTCTGAGCCTCTCTCTGTGCTCTGCCTCCTCCGCATCTGCGGCCTGACGTCTTCGATTTATCACTCCTGTTAGATAACTTTGTTTTGGTGCTTGGACTTCCCTTCCCATGACTTCATGCTGAAAGGCATTTTTAAATCTAGGATTTGCATTGTGCCGTAGTGACAGAGCCCGGTTA i calJac3.chr4 C 0 C 0 s canFam3.chr1 56242853 617 + 122678785 attgcccagagtcaagtagcccacagtgtcagggcagggactggaaaaactcagtgct--tgacattccaTGAGACATAAACTACAGTGTGTCATCCCTTCGAAGCAGCTATAAGTTCCATGGACTGGAGCAGGGGAGGGGACAAAATTGAACACATATTCCTTGGCGC-TGGTCCCCAGCTCTTTT-----GAGCTCCCACCTCCCTGAGTCACGAGAGCCGAGGCCAGGGGGAACGCTGTGTTATCACTGCCCTCATCACGACAGCTTTGGCCGCCGA-CGCTTGCAGTGTTTTTCTTTTGTTTGCTGAGCCAGTTAT-----------------------------GAAAAAATGAGCTCAAACAGTGCATTCTCTCTGCTTATCTAAACTCTTGTCCAAATGCTTCAGC-GTGATTTGCGAGGTCCAGGAG----GCCCACTCACGAGTCCTCGGCAGGCTGTGGCCCCCGGGCCGGG-------------GGCAGGGGTGCCTGCGAACGCTTGTTTT-CCTCCT--GCAGCTGCCGCTGGACATCTTTAATTTATTATTCCTCTTATATAACTTTGTTTTGGTGCTTGAACTTCCATTCCCATGACTTTATGTTGAAAAACATTCTAAAATCGAGGCTTTGCATTTCACAACAGTGGTGGAGCTCGGTTA i canFam3.chr1 I 184 I 258 a score=920453.000000 s hg38.chr6_KB021644v2_alt 184645 335 + 185823 TTTATTGTTATTTGCAATATGGCATATAATATGGCAATAATCTATGTCTAGTCAACAGTCAGGAATAACAAAAGATTCATGGCATATTAAAACAAGATTGATGTCCCTCTGCCGAGGGAGGTTATTGCTGGCCTAAGC---ACAAATGGCCAGAGTGAGTTGCACAGGCTGTGCAGCCCTGGAGGCCGTGGCTCTGGCCTCTCAGCCTTGCTCACACCCAGACCCCTGCACCCTTCTGTGAAGAACCCCTGTGATTTCAATCCTGCAGTGTGAAGTTGCCACGACGGAGCCAGCATCTCTATCCAAGTCTCCTGGGTGATAGAACGCATATGTAGGCC s panTro4.chr6 170773554 335 + 172623881 TTTATTGTTATTTGCAATGTGGCATATAATATGGCAATAATCTATGTCTAGTCAACAGTCAGGAATAACAAAAGATTTATGGCATATTAAAACAAAATTGATGTCCCTCTGCTGAGGGAGGTTATTGCTGGCCTAAGC---ACAAATGGCCAGAGTGAGTTGCACAGGCTGTGCAGCCCTGGAGGCCGTGGCTCTGGTCTCTCAGCCTTGCTCACACCCAGACCCCTGCACCCTTCTGTGAAGAACCCCTGTGATTTCAATCCTGCAGTGTGAAGTTGCCACGACTGAGCCAGCATCTGTATCCAAGTCTCCTGGGTGATAGAACACATATGTAGGCC i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172533365 332 + 174210431 TTTATTGTTATTTGCAGTATGGCATATAATATGGCAATAATCTATGTCTAGTCACCAGTCAGGAATAACAAAAGATTTATGGCATATTAAAACAAAATTGATGTCCCTCTGCTGAGGGAGGTTATTGCTGGCCTAAGC---AAAAATGGCCAGAGTGAGTTTCACAGGCTGTGCAGCCCTGGAGGCCGTGGCTCTGGTCTCTTGGCCTTGCTCACACCCAGACCCCTGCACCCTTCTGTGAAGAA--CCTGTGATTTCAATCCTGCAGTGTGAAGTTGCCACGACTGAGCCGGCATC-GTATCCAAGTCTTCTGGGTGATAGAACACATATGTGGGCC i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156390556 335 + 157873769 TTTATTGTTATTTGCAATATGGCATATAATATGGCAAGAATCCATGTCTAGTCACCAGTCAGGAATAACAAAAGATTTATGGCATATTAAAACAAAATTGATGTCTCTCTGCTGGGGGAGGTTATTGCTGGCCTAAGC---AAAAATGGCCAGAGTGAGTTTCACAGGCTGTGCAGCCCTGGAGGCCGTGGCTCCGGTCTCTTGGCCTTGCTCACACCCACACCCCTGCACCCTTCTGTGAAGAACCCCTGTGATTTCAATCCTGCAGCATGAAGTTGCCACGACTGAGCCAGCATCTGTATCCAAGTCTCCCGGGTGATAGAACACATATGTGGGCC i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168206833 334 + 169853907 TTTTTTGTTATTTGCAATATGGCATATAATATGGCAATAATCTATGTCTAGTCACCAGTCAGGGATAACAAGAGATTTATGGCATATTAAAACAAAATTGAGGTTCCTCTGATGAGGGAGGTTATTGCTGGCCTAAGC---AAAAATGGCCAGAGTGAATTTCACAGGCTGTGCAGCCCTGGAGGCCGTGGCTCTGGTCTCTCAGCCCTGCTCACACCCAGACCCCTGTACCCTTCTGTGAAGAGCCCCTGTGATTTCGAGCCTGCAGTGTGAAGTTGCCATGACTGAGTTAGCATCTGT-TTCAAGTCTCCTGGGTGACAGAACATATATTTGGGTC i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169160484 334 - 170955103 TTTTTTGTTATTTGCAATATGGCATATAATATGGCAATAATCTATGTCTAGTCACCAGTCAGGGATAACAAGAGATTTATGGCATATTAAAACAAAATTGATGTTCCTCTGATGAGGGAGGTTATTCCTGGCCTAAGC---AAAAATGGTCAGAGTGAATTTCACAGGCTGTGCAGCCCTGGAGGCCGTGGCTCTGGTCTCTCAGCCCTGCTCACACCCAGACCCCTGCACCCTTCTGTGAAGAGCCCCTGTGATTTCGAGCCTGCAGTGTGAAGTTGCCATGACTGAGTTAGCATCTGT-TTCAAGTCTCCTGGGTGACAGAACACATATTTGCGTC i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163976680 335 + 165299245 ttttttgttatttgcaaTATGGCATATAATATGGCAATAATCTATGTCTAGTCACCAGCCAGGGATGACAAAAGATTTATggcatattaaaacaaaattgatGTTCCTCTGATGAGGGAAGTTATTGCTGGCCTAAGCaaaaaaaaTGGCCAGAGTGAATTTCACAGGCTGTGCAGCCCTGGAGGCCGTGGCTCTGGTCTctcagccctgctgacacccaGACCCCTGCACCCTTCTGTGAAGAGCCCCTGTGATTTCGAGCCTGCAGTGTGAAGTTGCCATGACTGAGTTAGCA--TGT-TTCAAGTcttctgggtgacagaacacATATTTGGGTC i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96761907 337 + 98384682 TTTTTTGTTATTTGCAATATGGCATATAATATGGCAATAATCTATGTCTAGTCACCAGTCAGGGATAACAAGAGATGTATGGCATATTAAAACAAAATGGATGTTCCTCTGATGAGGGAAGTTATTGCTGGCCTAAGCAAAGAAAATGACCAGAGTGAATTTCACAGGCTGTGCAGCCCTGGAGGCTGTGGCTCTGGTCTCTCGGCCCTGCTCACACCCAGACCCCTGCACCCTTCTGTGAAGAGCCCCTGTGATTTCGAGCCTGCAGTGTGAAGCTGCCATGACTGAGTCAGCATCTGT-TTCAAGTCTCCTGGGTGACAGAACACATATGTGGGTC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169975235 318 + 171630274 TTTA---TTATTTGCAATACGGCATGGTATCCTAC-ATAATCCATGTCCAGTCA-CGGTCAGAAATAACAAAGGATTTATCGCATTTTAAAACAAAATTCGTGTTTCTCTGCTGAGGGAGGCTACTGCTGGCCTGGGC---AAAAATTGCCAGCGTGAGTTTCTCAGGCTGGGCCGCCCCGGAGGCCGTGGGTCCGGCCTCTCCGCCCTGCTCACAGCCAGACCCCTGCCCCGTTCTGCGAGGAGCCCCTGTGACTTCAGTCCTGCGGTG-GAAGTTGCCGTGGCTGGGTCAGCATCTATATTCAAGTCTCCCGGGCGACAGAACAC----------- i calJac3.chr4 C 0 C 0 e canFam3.chr1 56243470 258 + 122678785 I a score=1300109.000000 s hg38.chr6_KB021644v2_alt 184980 487 + 185823 AAACTCTGCAGCACTGATGCAGCTGGTG--------------ATGACTAAACATGGCAGATTTACCTAGTCAGTGAC--TTTATGCAGGAAGAAACCGAATG-CATGTGCGCATCT-------------------TGAGATGCGTGGGCCTTCTGTCCTGTGTGCAGCT---GCGTGTGCTCCCCCACTGG-----CCCGGCCTGCGCGCTTTTCTGCCCCG----------------------------------------------------------------GCACTCGCCAGCTGCCCAGTCCAGCTCAAGCCGGGATTTTCCACGGCTGCCTCTGAACGGTCTCCAAGCCGCAGCTTCCTCTCCTCCTTCTGAGCTCCAAGTAC-CATTGCTATAAGGGGA-CAGGAGCAGGGTGGGAGATTGTCCTgagtcttgactctgactgtgctgtgt--------------gcagggttatcacctttcca-catcccactttcttcgtctttacagtggggagagcaa-cttttacctttcccatcc----------cga----agcagg-----gctgtggtggtaggaagatcaaa-gaaatTGCTTTAGCTTTTAAAAATAGACAAG s panTro4.chr6 170773889 487 + 172623881 AAACTCTGCAGCACCGATGCAGCTGGTG--------------ATGACTAAACGTGGCAGATTTACCTAGTTAGTGAC--TTTATGCAGGAAGAAACCAAATG-CATGTGCGCATCT-------------------TGAGATGCGTGGGCCTTCTGTCCTGTGTGCAGCT---GCGTGTGCTCCCCCACTGG-----CCTGGCCTGCGCACTTTTCTGCCCCG----------------------------------------------------------------GCACTCGCCAGCTGCCCAGTCCAGCTCAAGCCAGGATTTTCCACGGCTGCCTCTGAACGGTCTCCAAGCTGCAGCTTCCTCTCCTCCTTCTGAGCTCCAAGTGC-CATTGCTATAAGGGGA-CAGGAGCAGGGTGGGAGATTGTCCTgagtcttgactctgactgtgctgtgt--------------gcagggttatcacctttcca-catcccactttcttcgtctttacagtggggagagcaa-cttttacctttcccatcc----------tga----agcagg-----ggtgtggtggtaggaagatcaaa-gaaatTGCTTTAGCTTTTAAAAATAGACAAG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172533697 487 + 174210431 AAACTCTGCAGCACTGATGCAGCTGGTG--------------ATGACTAAACGTGGCAGATTTACCTAGTTAGTGAC--TTTATGAAGGAAGAAACTGAATG-CATGTGCGTGTCT-------------------TGAGATGCGTGGGCCTTCTGTCCTGTGTGCAGCT---GTGTGTGCTTCCCCACTGG-----CCCAGCCTGCACGCTTTTCTGCCCCG----------------------------------------------------------------GCACTCGCCAGCTGCCCAGTCCAGCTCAAGCTGGGATTTTCCACGGCTGCCTCTGAATGGTCTCCAGGCTGCAGCTTCCTCACCTCCTTCTGAGCGCCAAGTGC-CATTGCTATAAGGGGA-CAGGAGCGGGGTGGGAGATTGTCCTgagtcttgactctgactgtgctgtgt--------------gcagggttatcacctttcca-catcccactttcttcgtctttacagtggggagaacaa-cttttaccttccccatcc----------tga----agcagg-----ggtgtggtggtaggaagatcaaa-gaaatTGCTTTAGCTTTTAAAAATAGAGAAG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156390891 548 + 157873769 AAACTCTGCAACACCGATGCAGCTGGTG--------------ATGACTAAACGTGACAGATTTACCTAGTTAGTGAC--TTTATGAAGGAAGACACAGAATG-CCTGTGTGCATCT-------------------TGAGATGCGTGGGCCTTCTGTCCCGCGTGCAGCT---GCGTGTGCTCCCCTGCTGG-----CCCGGCCTGCGC---CTTCTGTCCCGCGTGCAGCTGCGTGTGCTCCCCTGCTGGCCTGGCCTGCGCCTTCTGTCCTGTGTGCAGCTGCGTGTGCTCCCCCACTGCCCAGTCTAGCTCAAGCCGGGATTTTCCACGGCTGCCTCTGAATGGTCTCCAGGCTGCAGCTTCCTCACCTCTTTCTGAGCTCCAAGTGC-CATTGCTGTAAgggga-caggagctgggttggagattgtcctgagtcttgactctgactgtgctgtgt--------------gcagggttatcacctttcca-caacctactttcttcgtctttacagtggggagagcaa-cttttaccttccccatcc----------tga----agcagg-----ggtgtggcggtaggaagatcaaa-gaaatTGCTTTAGCTTTTAAAAATAGAGAAG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168207167 479 + 169853907 AAACTCTGAGGCACCGATGCAGCTGATG--------------TTGAATAAATGTGACAGATTTACCTAGTTAGTGACTTTTTATGAAGGAAGAAACCTAATG-CACGTGTGCGTCT-------------------TGAGACGTGTGGGCCTTCTGTCCCGTGTGCAGCT---GTGTGTGCTCCCCCACTGG-----CCCGGCCTGCGCGCTTTTCTGCCCCG----------------------------------------------------------------GCACTCGGCAGCTGCCCAGTCCAGCTCAAGCCAGGATTTTCCACGGCTGCCTCTGAATGGTCTCCAGGCT---GCTTCCTCACCTCCTGCTGAGCTCCAAGTGC-CATTGCTATGAGGGGA-CAGGAGCAGGGCGGGAGATTGTCCTGAGTCTTGACT----CTGTGCGGTGT--------------GCAGGGTTATCacctttaca-catcccactttcttcatctttacagtggggagagcaattttttaccttccccatcc----------tga----agcagg-----ggtgtggt----ggaagatcaaa-GAAAGTGCTTTAGCTTTTAAAAATAGAGAAA i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169160818 483 - 170955103 AAACTCTGAGGCACCGATGCAGCTGATG--------------TTGAATAAATGTGACAGATTTACCTAGTTAGTGACTTTTTATGAAGGAAGAAACCTAATG-CACGTGTGCGTCT-------------------TGAGACGTGTGGGCCTTCTGTCCCGTGTGCAGCT---GTGTGTGCTCCCCCACTGG-----CCCGGCCTGCGCGCTTTTCTGCCCCG----------------------------------------------------------------GCACTCGGCAGCTGCCCAGTCCAGCTCAAGCCAGGATTTTCCACGGCTGCCTCTGAATGGTCTCCAGGCT---GCTTCCTCACCTCCTGCTGAGCTCCAAGTGC-CATTGCTATGAGGGGA-CAGGAGCAGGGCGGGAGATTgtcctgagtcttgactctgactgtgcggtgt--------------gcagggttatcacctttaca-catcccactttcttcatctttacagtggggagagcaattttttaccttccccatcc----------tga----agcagg-----ggtgtggt----ggaagatcaaa-GAAAGTGCTTTAGCTTTTAAAAATAGAGAAA i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163977015 483 + 165299245 AAACTCTGAGGCACCGATGCAGCTGATG--------------TTGAATAAATGTGACAGATTTACCTAGTTAGTGACTTTTTATGAAGGAAGAAACCTAATG-CACGTGTGCGTCT-------------------TGAGACGTGTGGGCCTTCCGTCCTGTGTGCCGCT---GTGTGTGCTCCCCCACTGG-----CCCGGCCTGCGCGCTTTTCTGCCCCG----------------------------------------------------------------GCACTCGGCAGCTGCCCAGTCCAGCTCAAGCCAGGATTTTCCATGGCTGCCTCTGAATGGTCTCCAGGCT---GCTTCCTCACCTCCTGCTGAGCTCCAAGTGC-CATTGCTATGAGGGGA-CAGGAGCAGGGCGGGAGATTGTCTTGAGTCTTGACTCTGACTGTGCGGTGT--------------GCAGGGTTATCACCTTTACA-CATCCCACTTTCTTCATCTTTACAGTGGGGAGAGCAATTTTTTACCTTCTCCATCC----------TGA----AGCAGG-----GGTGTGGT----GGAAGATCAAA-GAAAGTgctttagcttttaaaaatagagaaa i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96762244 483 + 98384682 AAACTCTGAAGCACCGATGCAGCTGATG--------------TTGAATAAATGTGACAGATTTACCTAGTTAGTGACTTTTTATGAAGGAAGAAACCTAATG-CACGTGTGCGTCT-------------------TGAGACGTGTGGGCCTTCTGTCCTGTGTGCAGCT---GTGTGTGCTCCCCCACCGG-----CCCGGCCTGCGCGCTTTTCTGCCCCG----------------------------------------------------------------GCACTCGGCAGCTGCCCAGTACGGCTCAAGCCAGGATTTTCCACGGCTGCCTCTGAACGGTCTCCAGGCT---GCTTCCTCACCTCCTGCTCAGCTCCAAGTGC-CATTGCTATGAGGGGA-CAGGAGCAGGGCAGGAGATTGTCCTGAGTCTTGACTCTGACTGTGCAGTGT--------------GCAGGGTTATCacctttaca-catcccactttcttcatctttacagtggggagagcaattttttaccttccccagcc----------tga----agcagg-----ggtgtggt----ggaagatcaaa-GAAAGTGCTTTAGCTTTTAAAAATAGAGAAA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169975553 514 + 171630274 --ACCCTGCGGTACCAATGCAGCTGGCGAAGGCAAGTGTGTTACGACTAAACGTGACAGATTCACC--GTTAGTGACTTTTTCAGAAGGAAGAGGCCTGATG-CGTGTG-ATGTCC-------------------AGAGATGCGTGGGCC-TCCGTCCCGCGTGCAGCTGGGGTGTGTGCTCCCCACC--G-----CCCGCCCTGCACGCTTGTCCGCCCCG----------------------------------------------------------------GCACTCGCCAGCTGCCCAGGCCCCCTCCAGCCGGA--TTCCCACAACTGCCTCTGAATGGTCTCCAGGCCGCAGCTTCCTCTCCTCCTTCTGAGCCTCAAGTGC-CACTGCGACCAGGGGACCAGGAGCA-GGCGGGAGAGCGTCCTCAGCCTTGACTCGGACTGCGCGGTGTGGTGGCCGAGGCAGGCAGGGTTATCACCCTCCTA-CATCCCACTTCCTTCATCTTTAGGGACGGGACAGAAA-TTCTTACCTTCCCCGTCC----------TGAGTTTAGCAGG-----TGTATGGTGTGAGGAAGATCAAA-GAACGTGCTTTGGTTTTTAAAAACAGAGAAg i calJac3.chr4 C 0 N 0 s canFam3.chr1 56243728 443 + 122678785 AAAGTGTGTGGCA--GGTGCATCTGAGA--------------CTG----------------TTACCTAATGCGTAAT----GATGTAAAAAGAAAAACAATGTTCTGTGCACGTCTTAGAATGATGTCAATCAGGTGTGAAGAATGAGCC-CCTGTGCCTCCTGCTTCT---GT-CCTGCTTTCCTATAAGCTGCTCCCCGTGTGGGTGC-ACACTGCCCCA----------------------------------------------------------------ACAC---CCACCTGTCCTGT---GCTCAGGCTCAGA-------------------AGAGCTCTGGAGCCCATGGTTTCTCCACCTC-TTCTGGGTTCCAGGTACTCAGTGT------GCCA-CAGAAGCAGGCC-------CACCATGCACCCTGGATCCGAACCACCTGTCT--------------GT---GTCTGCACCTTGACATCACCCCA---------------------GGGCAGCAG-TGTTCACCTCTCCCTTCCAGGGCCTGGTAGA----GGCAGGGGGATGGGGTGGTAACAGGAGGATGACATGATAGTGCGCTGGCTTTTGAAAACAGGAAG- i canFam3.chr1 I 258 C 0 a score=861489.000000 s hg38.chr6_KB021644v2_alt 185467 353 + 185823 AAGCCAACAGTTCTTGGGTGGACGTGTCAGACCTGTTCCCGACAGGA---CAGATGGCA-GCACAGCCAGACCCGCTCAGTGTCCCAAGAGCAGCCCC-GGCAAAGCAAGGC-GGGAGCCGCCCCTCACCAGCCCAGCTGTGCTCACACACCCCCT-CTGCAATGTCGGATGGTTCACAACAGGATTTATCGTTTTCTTTAAAGTCGCCTTGTGGAAACTCTTGTATCCC--------TTACTCTCTTGTGCTGTTATTGAAGGTTTAATGGGTTCGTTTTGACTCCTCAGATAGACTGTGCTTGATATTTCTTGC---AAGCTCAACACGATGGCTGGAACATGTAAGTGTGTGAGTT-AAAAACAGTTTG s panTro4.chr6 170774376 353 + 172623881 AAGCCAACAGTTCTTGGGTGGACGTGTCAGACCTGTTCCCTACAGGA---CAGATGGCA-GCACAGCCAGACCCACTCAGTGTCCCAAGAGCAGCCCC-GGCAAAGCAAGGC-GGGAGCCGCCCCTCACCAGCCCAGCTGTGCTCACACACCCCCT-CTGCAATGTCGGATGGTTCACAACAGGATTTATCGTTTTCTTTAAAGTCGCCTTGTGGAAACTCTTGTATCCC--------TTACTCTCTTGTGCTGTTATTGAAGGTTTAATGGGTTCGTTTTAACTCCTCAGATAGACTGTGCTTGATATTTCTTGC---AAGCTCAACACGATGGCTGGAACATGTAAGTGTGTGAGTT-AAAAACAGTTTG i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172534184 352 + 174210431 AAGCCAACAGTTCTTGGGTGGACGTATCAGACCTGTTCCCGACAGGA---CAGATGGCG-GCACAGCCAGACCCTCTCAGTGTCCCAAGAGCAGCCCC-GGCAAAGCAAGGC-AGGAGCCGCTCCTCACCAGCCCAGCTGTGCTCACACACCACCT-CTGCAATGTCGGATGGTTCACAACAGGATTTATCGTTTTCTTTAAAGTCGCCTTGTGGAAACTCTTGTATCCC--------TTACTCTCTTGTGCTGTTATTGAAGGTTTAATGGGTTCGTTTTGACTCCTCAGATAGACTGTGCTTGATATTTCTTGC---AAGCTCAACACGATGCCTGGAACATGTAAGTGTGTGAGTT--AAAACAGTTTG i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156391439 353 + 157873769 AAGCCAAGAGTTTGTGGGTGGACGTATCAGACCTGTTCCCAACAGGA---CAGATGGCA-GCACAGCCAGACCCTCTCAGTGTCCCAAGAGCAGCCCC-GGCAAAGCAAGGC-GGGAGCCGCCCCTCACCAGCCCGGCTGTGCTCACACACCCCGT-CTGCAATGTCGGATGGTTCACAACAGGATTTACGGTTTTCTTTAAAGTCACCTTGTGGAAACTCTCGTATCCC--------TTACTCTCTTGTGCTGTTATTGAAGCTTTAATGGGTTCGTTTTGACTCCTCAGATAGACTGTGCTTGATATTTCTTGC---AAGCTCGACACGATGCCTGGAACATGTAAGTGTGTGAGTT-AAAAAGAGTTTG i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168207646 355 + 169853907 AAGCCAACAGTTCTTGGGTGGACATATCAGACCTGTTCCCGACAGGA---CAGATGGCA-GCACAGCCAGACCCGCTCTGTGTCCCAAGAGCAGCCCCGGGCAGAGCAAGGTGGGGAGCCGCCCCTCACCAGCCCAGCTGTTCTCACACACTCCCT-CTGCAACGTCGGATGGTTCACAACAGGATCTATTGTTTTCTTTAATTTCGCTTTGTGGAAACCCTTGTATCCC--------TTACTCTCTTGTGCTGTTATTGAAGGTTTAATGGGTTCGTTTTGACTCCTCACATAGACTATGCTTGATAGTTCTTGC---AAGCTCAACACGATGCCTGGAACAGGTAAGTGGGTGAGTG-AAAAACAGTTTG i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169161301 355 - 170955103 AAGCCAACAGTTCTTGGGTGGACATATCAGACCTGTTCCCGACAGGA---CAGATGGCA-GCACAGCCAGACCCGCTCTGTGTCCCAAGAGCAGCCCCGGGCAGAGCAAGGTGGGGAGCCGCCCCTCACCAGCCCAGCTGTTCTCACACACTCCCT-CTGCAACGTCGGATGGTTCATAACAGGATCTATTGTTTTCTTTAATTTCGCTTTGTGGAAACCCTTGTATCCC--------TTACTCTCTTGTGCTGTTATTGAAGGTTTAATGGGTTCGTTTTGACTCCTCACATAGACTATGCTTGATAGTTCTTGC---AAGCTCAACACGATGCCTGGAACAGGTAAGTGGGTGAGTG-AAAAACAGTTTG i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163977498 354 + 165299245 aagccAACAGTTCTTGGGTGGACATATCAGACCTGTTCCCGACAGGA---CAGATGGCA-GCAAGGCCAGACCCGCTCTGCGTCCCAAGAGCAGCCTCGGGCAGAGCAAGGTGGGGAGCCGCCCCTCACCAGCCCAGCTGTTCTCACACACTCCCT-CTGCAACGTC-GATGGTTCACAACAAGatctattgttttctttaatttcaccTTGTGGAAACCCTTGTATCCC--------TTACTCTCTTGTGCTGTTATTGAAGGTTTAATGGGTTCGTTTTGACTCCTCACATAGACAATGCTTGATAGTTCTTGC---AAGCTCAACACGATGCCTGGAACAGGTAAGTGTGTGAGTG-AAAAGCAGTTTG i papAnu2.chr4 C 0 C 0 s chlSab2.chr13 96762727 355 + 98384682 AAGCCAACAGTTCTTGGGTGGACATATCAGACCTGTTCCCGACAGGA---CAGATGGCA-GCACAGCCAGACCCGCTCTGTGTCCCAAGAGCAGCCCTGGGCAGAGCAAGGTGGGGAGCCGCCCCTCACCAGCCCAGCTGTTCTCACACACTCCCT-CTGCAACGTCGGATGGTTCACAACAGGATCTATTGTTTTCTTTAATTTCGCCTTGTGGAAACCCTTGTATCCC--------TTACTCTCTTGTGCTGTTATTGAAGGTTTAATGGGTTCGTTTTGACTCCTCATATAGACTATGCTTGATAGTTCTTGC---AAGCTCAACACGATGCCTGGAACAGGTAAGTGTGTGAGTG-AAAAACAGTTTG i chlSab2.chr13 C 0 N 0 s canFam3.chr1 56244171 311 + 122678785 GAGTT-GCAGTTCTGGAGTGGAGGCATCACACCTGCATGCAACTGGGTGCCAGGGGGCACACACAGTGAGGCCC---------------------------------------TGCACCTGCTAC---CTGACCCTGC----CTCACAAAACCCTTGTTGGAATGTGGGGTGGCTCACGTGAGACTT----GTCTTATT---GCCAGCCTTCTGAACACTGTCACATCTCTGGGACTGTTCCTCTCCTGTACTTGTATTGAATTATTAATATGTCTG-CTTAACTCCCCAAATAGACTATGC-----ACCTCGTGTGCAGAGCTTGAC-CAGTGCCTAGAGCACTGGAATACGTGAGTCAAAAAACAGCTCG i canFam3.chr1 C 0 C 0 a score=2800.000000 s hg38.chr6_KB021644v2_alt 185820 1 + 185823 G s panTro4.chr6 170774729 1 + 172623881 G i panTro4.chr6 C 0 C 0 s ponAbe2.chr6 172534536 1 + 174210431 G i ponAbe2.chr6 C 0 C 0 s nomLeu3.chr3 156391792 1 + 157873769 G i nomLeu3.chr3 C 0 C 0 s rheMac3.chr4 168208001 1 + 169853907 G i rheMac3.chr4 C 0 C 0 s macFas5.chr4 169161656 1 - 170955103 G i macFas5.chr4 C 0 C 0 s papAnu2.chr4 163977852 1 + 165299245 G i papAnu2.chr4 C 0 C 0 s canFam3.chr1 56244482 1 + 122678785 G i canFam3.chr1 C 0 N 0 a score=4200.000000 s hg38.chr6_KB021644v2_alt 185821 2 + 185823 GC s panTro4.chr6 170774730 2 + 172623881 GC i panTro4.chr6 C 0 N 0 s ponAbe2.chr6 172534537 2 + 174210431 GC i ponAbe2.chr6 C 0 N 0 s nomLeu3.chr3 156391793 2 + 157873769 GC i nomLeu3.chr3 C 0 N 0 s rheMac3.chr4 168208002 2 + 169853907 GC i rheMac3.chr4 C 0 N 0 s macFas5.chr4 169161657 2 - 170955103 GC i macFas5.chr4 C 0 N 0 s papAnu2.chr4 163977853 2 + 165299245 GC i papAnu2.chr4 C 0 N 0