##maf version=1 scoring=roast.v3.3 a score=3600.000000 s hg38.chrUn_KI270754v1 0 1 + 40191 G s panTro4.chr4_GL389869_random 27301 1 + 69473 g i panTro4.chr4_GL389869_random N 0 C 0 s ponAbe2.chr4_random 19310118 1 + 23176937 g i ponAbe2.chr4_random N 0 C 0 s nomLeu3.chr7b 1379389 1 - 115148730 g i nomLeu3.chr7b N 0 C 0 s rheMac3.chr5 482261 1 - 184069350 g i rheMac3.chr5 N 0 C 0 s macFas5.chr5 483311 1 - 189454096 g i macFas5.chr5 N 0 C 0 s papAnu2.chr5 381550 1 - 178775436 G i papAnu2.chr5 N 0 C 0 s calJac3.chr3 407559 1 + 190850796 g i calJac3.chr3 N 0 C 0 s tupBel1.scaffold_4211.1-1441 743 1 + 1441 g i tupBel1.scaffold_4211.1-1441 N 0 C 0 a score=1018790.000000 s hg38.chrUn_KI270754v1 1 318 + 40191 CATAGTCAAGTTTGCAAACCACTGCTCTCGAGTTTTAATTGACATTAAGTAGAACTTTTAATGGATGCACCCCTAATTTCTGAATTATTAATGATTAATAGAATCTGCTTTTACTATAC-ACTCACT---AAAATACATAGCTGCTTGGGCTGAAATATACAGATGTGTT----GCCTTGCTGAAAAGGGAAGGAAAATCAAAGCTCAGACTGAGTCATGTTTGAAGTTTAGCCATGAAATTTGATGGCTTTTAGCTGAAT-T-AAATGGCAGGCAAAATGTGTGTC--TGTTCTCCACCTCTCTCCTCTAACAGCGTTTCCCTGTCTTG s panTro4.chr4_GL389869_random 27302 318 + 69473 cacagtcaagtttgcaaaccactgCTCTCGAGTTTTAACTGACATTAAGTAGAACTTTTAATGGATGCACCCCTAATTTCTGAATTATTAATGATTAATAGAATCTGCTTTTACTATAC-ACTCACT---AAAATACATAGCTGCTTGGGCTGAAATATACAGATGTGTT----GCCTTGCTGAAAAGGGAAGGAAAATCAAAGCTCAGACTGAGTCATGTTTGAAGTTTAGCCATGAAATTTGATGGCTTTTAGCTGAAT-T-AAATGGCAGGCAAAATGTGTGTC--TGTTCTCCACCTCTCTCCTCTAACAGCATTTCCCTGTCTTG i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19310119 317 + 23176937 cacagtcaagtttgcaaaccactgCTCTTGAGTTTTAGCTGCCATTAAGTAGAACTTTTAATGGATGCAGCCCTAATTTCTGAATTATTAATGATTAATAGAATCTGCTTTTACTATAC-ACTCACT---AAAATACATAGCTGCTTGGGCTGAAATATACAGATGTGCT-----CCTTGCTGAAAAGGGAAGGAAAATCAAAGCTCTGACTGAGTCATGTTTGAAGTTTAGTCATGAAATTTGATGGCTTTTAGCTGAAT-T-AAATGGCAGGCAAAATGTGTGTC--TGTTCTCCACCTCTCTCCGCTAACAGCGTTTCCCTGTCTTG i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1379390 318 - 115148730 cacagtcaagtttgcaaaccactgCTTTGGAGTTTTAACTGCCTTTAAGTAGAACTTTTAATGGATGCAGCCCTAATTTCTGAATTATTAATGATTAATAGAATCTGCTTTTACTATAC-ACTCACT---AAAATACATAGTTGCTTGGGCTGAAATATACAGATGTGTT----GCCTTGCTGAAAAGGGAAGGAAAATCAAAGCTCTGACTGAGTCATGTTTGAAGTTTAGCCATGAAATTTGATGGCTTTTAGCTGAAT-T-AAATGGCAGGCAAAATGTATGTC--TGTTCTCTACCCCTCTCCTCTAACAGAGTTTCCCTGTCTTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 482262 318 - 184069350 cacagtcaagtttgcaaaccgctgCTCTTGAGTTTTAACTGCCACTAAGTAGAACTTTCAATAGATGCAGCCCTAATTTCTGAATTATTAATGATTAATAGAATCTGCTTTTACTATAC-ACTCACT---AAAATACATAGCTGCTTGAGCTGAAATATACAGATGTGTT----GCCTTGCCGAAAAGAGAAGGAACATCAAAGCTCTGACTGAGTCATGTTTGCAGTTTAGCTGTGAGATTTGATGGCTTTTAGCTGAAT-T-AAATGGTAGGCAAAATGTGCGTC--TGTTCTCCACCGCTCTCCTCTAACAGCACTTCCCTGTCCTG i rheMac3.chr5 C 0 I 1 s macFas5.chr5 483312 319 - 189454096 cacagtcaagtttgcaaaccgctgCTCTCGAGTTTTAACTGCCACTAAGTAGAACTTTCAATAGATGCAGCCCTAATTTCTGAATTATTAATGATTAATAGAATCTGCTTTTACTATATAACTCACT---AAAATACATAGCTGCTTGAGCTGAAATATACAGATGTGTT----GCCTTGCCGAAAAGAGAAGGAACATCAAAGCTCTGACTGAGTCATGTTTGCAGTTTAGCTGTGAGATTTGATGGCTTTTAGCTGAAT-T-AAATGGTAGGCAAAATGTGCGTC--TGTTCTCCACCGCTCTCCTCTAACAGCACTTCCCTGTCTTG i macFas5.chr5 C 0 I 1 s papAnu2.chr5 381551 318 - 178775436 CACAGTCAAGTTTGCAAACCACTGCTCTCGAGTTTTAACTGCCACTAAGTAGAACTTTCAATGGATGCAGCCCTAATTTCTGaattattaatgattaatagaatCTGCTTTTACTATAC-ACTCACT---AAAATACATAGCTGCTTGAGCTGAAATATACAGATGTGTT----GCCTTGCCGAAAAGAGAAGGAACATCAAAGCTCTGACTGAGTCATGTTTGCAGTTTAGCTGTGAGATTTGATGGCTTTTAGCTGAAT-T-AAATGGTAGGCAAAATGTGCGTC--TGTTCTCCACCGCTCTCCTCTAACAGCACTTCCCTGTCTTG i papAnu2.chr5 C 0 I 1 s calJac3.chr3 407560 316 + 190850796 cacagtaaagtttgcaaaccattgCCCTCAAGTTTTAACTGCCATTAAGTAGAACTTTTAATGGATGCAGCCCTAATTTCTGAATTATCATTGATTAATAGAATCTGCTTTTAATATAC-ACTCCCT---AAAATACACAGCTGCTTAGGCTGAAGTATACAGACGTCTT----GCCTTGCTGAAAAGAGAAAGGCAGTCAAAGCTCTGACGGAGTCATGTTTGAAGTTTAGCTGGGAAATTTGATGGCTTTTAGCTGAACGT-CAATGCCAGGCAAAATGTGTGTC--TGTTCTCCACC---CTTCTCTAACACCACTTCCCTGCCTGG i calJac3.chr3 C 0 I 1 s tupBel1.scaffold_4211.1-1441 744 327 + 1441 catactaaagttcgaaaaccactgCCCTTGAGTTTTTACTGCCATCAAATAGAACCTTTAATGGATACACCTATAATTTCTGACTTATCATTGATTAAGAGAGTCTGTTTTTAATATAC-GATCACTAAAAAAATACATAGCTGCAGGGGCTGAAAGATACTGACATGTTTGTTGTCTTGCTAAAAAGAGAAGAAAAGTCAAACCTCGAACTGAGTCATGTTTGAAGTTCAGCTGTGAAATGTGATGGCTTTCAGCTAAAT-TCGAATGCCAGGC-AAATGCGTGTCTGTGTTCCCCACCCTTCGCCTCTGACACCGTTTTGCTGTCTTG i tupBel1.scaffold_4211.1-1441 C 0 C 0 s canFam3.chr16 41754890 304 + 59632846 catactaaagttttaaaac---tacCCTCATGTTTTAACTGCCTTTAAAAAGAACTTTTAATGGATGCAGCCATAATTTCATAACAATT--TGACTAATAGAATCTGCCTTTAATATAT-AATCGCT---AAAGTACATAGCCATATAGAGTGAAATATGCAGAT---------GCATTGTTGAAAAGGGAAGGAAAGTCAAACCTCTGACCAAGTCATG-TTGAAGTTCAGCTGTGAAATTTGATGATTTTTAGCTGAAT-TTAAATGCCAGGCAAAATGTG------TGCTCACCACCCCTCCCCTCTGACACCATCTGACTGTCTTG i canFam3.chr16 N 0 C 0 a score=6006.000000 s hg38.chrUn_KI270754v1 319 1 + 40191 A s panTro4.chr4_GL389869_random 27620 1 + 69473 A i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19310436 1 + 23176937 A i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1379708 1 - 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 482581 1 - 184069350 A i rheMac3.chr5 I 1 C 0 s macFas5.chr5 483632 1 - 189454096 A i macFas5.chr5 I 1 C 0 s papAnu2.chr5 381870 1 - 178775436 A i papAnu2.chr5 I 1 C 0 s rhiRox1.KN298591v1 154467 1 - 927060 A i rhiRox1.KN298591v1 N 0 I 3265 s calJac3.chr3 407877 1 + 190850796 A i calJac3.chr3 I 1 C 0 s saiBol1.JH378165 380468 1 + 14256875 A i saiBol1.JH378165 N 0 N 0 s tupBel1.scaffold_4211.1-1441 1071 1 + 1441 A i tupBel1.scaffold_4211.1-1441 C 0 I 1 s canFam3.chr16 41755194 1 + 59632846 A i canFam3.chr16 C 0 C 0 a score=606287.000000 s hg38.chrUn_KI270754v1 320 189 + 40191 -GCTAATCCTTATGCAGGGATGTCTTATCACTGCTCACTGAATATCTATAGAAAGACACGAGTTACAAAGTCAAGAGCTGCAGACT--TCTCTAGGTTTCTCCTCGGAACAGTCAGTGACACAGAGCTGTGTCAGGCAGAGCCTGCTGCTGATTTAATTTGATCTTTCTAGGGAGGATTAAGAATATTGTCC s panTro4.chr4_GL389869_random 27621 189 + 69473 -GCTAATCTTTATGCAGGGATGTCTTATCACTGCTCACTGAATATCTATAGAAAGACACGAGTTACAAAGTCAAGAGCTGCAGACT--TCTCTAGGTTTTTCCTCGGAACAGTCAGTGACACAGAGCTGTGTCAGGCAGAGCCTGCTGCTGATTTAATTTGATCTTTCTAGGGAGGATTAAGAATATTGTCC i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19310437 189 + 23176937 -GCTAATCCTTATGCAGGGATGTCTTATCACTGCTCACTGAATATCTATAGAAAGAGACGAGTTACAAAGTCAAGAGCTGCAGACT--TCTCTAGGTTTTTCCTCGGAACAGTCAGTGACACAGAGCTGTGTCAGGCAGAGCCTGCTGCTGATTTAATTTGATCTTTCTAGGGAGGATTAAGAATATTGTCC i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1379709 189 - 115148730 -GCTAATCCTTATGCAGAGATGTCTTATCACTGCTCACTGAATATCTGTAGAAAGACACGAATTACAAAGTCAAGAGCTGCAGACT--TCTCTAGGTTTTTCTTCGGAAGAGTCAGTGACACAGAGCTGTGTCAGGCAGAGCCTGCTGCTGATTTAATTTGATCTTTCTAGGGAGGATTAAGAATATTGTCC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 482582 189 - 184069350 -GTTAACCCTTACGCAGGGATGTCTTATCACTGCTCACTGAATTTCAGCAGAAAGACAGGAGTTACAAAGTGAAGAGCTGCAGGCT--TCTCCAGGTTTTTCATCAGAACAGGAAGTGACACAGAGCTGTGTCAGGCAGAACCTGCCACTGATTTAATTTGATCTTTCAAGGGAGGATTAAGGATATTGTCC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 483633 189 - 189454096 -GCTAACCCTTATGCAGGGATGTCCTATCACTGCTCACTGAATTTCAGCAGAAAGACAGGAGTTACAAAGTGAAGAGCTGCAGGCT--TCTCCAGGTTTTTCATCAGAACAGGAAGTGACACAGAGCTGTGTCAGGCAGAACCTGCCGCTGATTTAATTTGATCTTTCAAGGGAGGATTAAGGATATTGTCC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 381871 189 - 178775436 -GCTAACCCTTACGCAGGGATGTCTTATCACTGCTCACTGAATTTCAACAGAAAGACAGGAACTACAAAGTGAAAAGCTGCAGGCT--TCTCCAGGTTTTTCATCAGAACAGGCAGTGACACAGAGCTGTGTCAGGCAGAACCTGCTGCTGATTTAATTTGATCTTTCAAGGGAGGATTAAGGATATTGTCC i papAnu2.chr5 C 0 C 0 s calJac3.chr3 407878 166 + 190850796 -GCTCATCCTTATGCAGGGATGTCTTATCACTGCTCACTGAATTTCTATAGAAAGACATGA-----------------------CA--TCTCCAGATTTTTCACCTGAACAGCCAGTGACACTGAGCTGTATCAGGCAGAGCCTGCTGCTGATCTAATTCCATCTTTCTGGGGAGGATTAAGAATATTGTCC i calJac3.chr3 C 0 C 0 s tupBel1.scaffold_4211.1-1441 1073 188 + 1441 -GCTAATCGTTCTGCGGCAATGGCTTATCTCTGCTT-CCGGATTTCCATGGGAAGGCCTGGGTTACACAGTCAAGAGCTGCAGCCT--GCCCTGGGTTTCCCTGTGGAGCAGTCAGTGACACAGAGCTGTCTCGGGCAGAGCCTGCCACTGATTTAATTTGATCTTTCCAGGGAGGATTAAAAATATTGTTC i tupBel1.scaffold_4211.1-1441 I 1 N 0 s canFam3.chr16 41755195 188 + 59632846 GGCTAATCTTCATGCAGGAATGGCTTATCACTGCTCCCTGAATTTCTATAGAAAGACATGAGTTACAAAGTCAAGAGCTGCAGACTTCTCTCTAGGCTTCTCATCCAAACAGTCAGTGACATAGAGCTGTATCAGGGAGAGCC----ACTGATTTAATTTGATCTTTCCAGGGAGGATTAAAAATATTGTTC i canFam3.chr16 C 0 C 0 e rhiRox1.KN298591v1 154468 3265 - 927060 I a score=690094.000000 s hg38.chrUn_KI270754v1 509 307 + 40191 TCAACCCAGTTAGAATGTTGCTGCTAAGTTTCAATGTGTCAGAGGCTTTTTCATTTTCCCAGAGCCAGTGCTGGCTGGCGTGGCGAGTGACAACATTGCAGCATTTGCA-----------------------------------------------------------------------------------------------------------------AAGTGACTACGTCGTAGCATTTGCATTATCTTCCTTGGTGTGCATATCTTTCAACCATGTCAG------GGAAGCGGTTGGAAGGAAAAATCACAGAGCACATAAGAAGGACTTCTGG-GCCTGCTCCGGAGGCTTGCAGA-------GG------ACATGCCCGAAGGGGTGCATGAAGCCTTCTGTCCCATACCTGTCCCTTGCCTCGATGGGATT s panTro4.chr4_GL389869_random 27810 307 + 69473 TCAACCCAATTAGAATGTTGTTGCTAAGTTTCAATGTGTCAGAGGCTTTTTCATTTTCCCAGAGCCAGTGCTGGCTGGCGTGGCGAGTGACAACATTGCAGCATTTCCA-----------------------------------------------------------------------------------------------------------------AAGTGACTACATCGTAGCATTTGCATTATCTTCCTTGGTGTGCACATCTTTCAACCATGTCAG------GGAAGCGGTTGGAAGGAAAAATCACAGAGCACATAAGAAGGACTTCTGG-GCCTGCTCCGGAGGCTTGCAGA-------GG------ACATGCCCGAAGGGGTGCATGAAGCCTTCTGTCCCATACCTGTCCCTTGCCTCGATGGGATT i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19310626 405 + 23176937 TCAACCCAGTTAGAATGTTGCTGCTAAGTTTCAATGTGTCAGAGGCTTTTTCATTTTCCCAGAGCCAGTGCTGGCTGGCGTGGCAAGTGACAGCATTGCAGTATTTGCAAAGTG---------------ACAACATTGCAGCATTTGCAGTGACTACATGGCAGCATTTGCAAAGTGACAACATTGTAGCATTTGCCAAGTGACAACATTGCCGCATTTGCCAAGTGACTACATCGCAGCATTTGCATTATCTTCCTTGGCGTGCACATCTTTCAACCATGTCAG------GGAAGTGGTTGGAAGGAAAAATCACAGAGCGCATAAGAAGGGCTTCTGG-GCCTGCTCCGGAGGCTTGCAGA-------GG------ACATGCCCGAAGGGGGGCATGAAGCCTTCCGTCCCATACCTGTCCCTTGCCCCCATGGGATT i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1379898 357 - 115148730 TCAACCCAGTTAGAATGTTGCTGCTAAGTTTCAATGTGTCAGAGGCTTTTTCATGTTCCCAGAGCCAGTGCGGGCTGGTGTGGCTAGTGACAACATTGCAGCATTTGCAAAGTGACAGCATTGCAGCAT---------------------------------------------------------------TTGCAAAGTGACAACATTGCAGCATTTGCAAAGTGACAACATTGCAGCATTTGCATTATCTTCCTTGGCGTGCACATCTTTCACCCATGTCAG------GGAAGTAGTTGGAAGGAAAAATCACAGAGTACATAAGAAGGGCTCCTGG-GCCCGCTGCGGAGGCTTGCAGA-------GG------ACATGCCCGAAGGGGTGTATGAAGCCTTCGGTCCCATACCTCTCCCTTGCCTCAATGGGATT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 482771 282 - 184069350 TCAACCCAGTTAGAATGTTGCTGCTAAGTTTCAATGTGTCGGAGGCTTTTTCATTTTCCCGGAGCCAATGCTGGCTGGCATGGC------------------------------------------------------------------------------------------------------------------------------------------AAGTGACAGCATCCCAGCATTTGCATTATCTTCCTTAGCGTGCACATTTTTCAACCAAGCCAG------TGAAGTGGTTGGGAGGAAAAATCACAGAGCTCATAAGAAGGGCTCCTGG-GCCTGCTCGGGAGGCTTGCAGA-------GG------ACATGCCCGAAGGTGTGCATGAGGCCTTCTGTCCCACACCTGCCCcttgtctcgatgtgatt i rheMac3.chr5 C 0 I 194 s macFas5.chr5 483822 282 - 189454096 TCAACCCAGTTAGAATGTTGCTGCTAAGTTTCAATGTGTCGGAGGCTTTTTCATTTTCCCGGAGCCAATGCTGGCTGGCATGGC------------------------------------------------------------------------------------------------------------------------------------------AAGTGACAGCATCCCAGCATTTGCATTATCTTCCTTAGCGTGCACATTTTTCAACCAAGCCAG------TGAAGTGGTTGGGAGGAAAAATCACAGAGCTCATAAGAAGGGCTCCTGG-GCCTGCTCGGGATGCTTGCAGA-------GG------ACATGCCCGAAGGTGTGCATGAGGCCTTCTGTCCCACACCTGCCCcttgtctcgatgtgatt i macFas5.chr5 C 0 C 0 s papAnu2.chr5 382060 282 - 178775436 TCAACCCAGTTAGAATGTTGCTGCTAAGTTTCAATGTGTCGGAGGCTTTTTCATTTTGCCGGAGCCAATGCTGGCTGGCGTGGC------------------------------------------------------------------------------------------------------------------------------------------AAGTGACAGCATCCCAGCATTTGCATTATCTTCCTTAGCGTGCACATTTTTCAACCAAGCCAG------TGAAGTGGTTGGGAGGAAAAATCACAGAGCTCATAAGAAGGGCTCCTGG-GCCTGCTCGGGAGGCTTGCAGA-------GG------ACATGCCCGAAGGTGTGCATGAGGCCTTCTGTCCCACACCTGCCCCTTGTCTCGATGTgatt i papAnu2.chr5 C 0 C 0 s calJac3.chr3 408044 287 + 190850796 TCAACCCAGTTAGAATGTTGCTGCTAAGTTTCAATGTGTCAGAGGCTTTTTCATTTTCCCAGAGCCACTGCTGGCTGGGGTGGC------------------------------------------------------------------------------------------------------------------------------------------AAGTGACAACATAGCAGCATTTGCATGATCTTTCTTAGTGAGCACATTTTTCAA-CATGCCAG------GGAAGTGATTTGAAGGCAAACTCACAGAGAGCATAACAGGGGCTCCTGGCCCCTGCTCTGGAGGCTCCCTGA-------GGAGCCACACATGCCCCAAGGTATGTGTGAAGACTCCCGTGCCATGCCTGTGCCCTGCC-CGATGTGATT i calJac3.chr3 C 0 I 4 s canFam3.chr16 41755383 296 + 59632846 TCGCCCCAGTTAGAATGTTGCTGCTAAGCTTCAATATGTCAGAGGCTTTTTCATTTTCGCAGTGCCAGTGCTGGCTGGGATGGT------------------------------------------------------------------------------------------------------------------------------------------AAGTGACAACAGTGCAGTATTTGCATTATCTTCCTTAGCTTGCACATTTTTCAACCATGTCAGAGCAGAAGAGGTGATTTGAAGGAAAACTCACCAAGAATATAAGAAGGGCTCCTGCCTTGTGCTCTGAAGGATTGCGAATAGAGCTGA------AAATGCCCAAAGGAATGAGTAAAGCCTTCTGCTGTATACCTGCACTGCCCTTCAGTGTGATT i canFam3.chr16 C 0 C 0 e rhiRox1.KN298591v1 154468 3265 - 927060 I a score=6317.000000 s hg38.chrUn_KI270754v1 816 3 + 40191 CTG s panTro4.chr4_GL389869_random 28117 3 + 69473 TTG i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19311031 3 + 23176937 TTG i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1380255 3 - 115148730 TTG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 484104 3 - 189454096 ttg i macFas5.chr5 C 0 I 191 s papAnu2.chr5 382342 3 - 178775436 ttg i papAnu2.chr5 C 0 I 192 s calJac3.chr3 408335 3 + 190850796 TTG i calJac3.chr3 I 4 C 0 s canFam3.chr16 41755679 2 + 59632846 -TG i canFam3.chr16 C 0 C 0 e rhiRox1.KN298591v1 154468 3265 - 927060 I e rheMac3.chr5 483053 194 - 184069350 I a score=5415.000000 s hg38.chrUn_KI270754v1 819 5 + 40191 TACAC s panTro4.chr4_GL389869_random 28120 5 + 69473 TACAC i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19311034 5 + 23176937 TACAC i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1380258 5 - 115148730 CACAC i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 408338 5 + 190850796 TACAC i calJac3.chr3 C 0 C 0 s canFam3.chr16 41755681 5 + 59632846 TTCAC i canFam3.chr16 C 0 C 0 e rhiRox1.KN298591v1 154468 3265 - 927060 I e papAnu2.chr5 382345 192 - 178775436 I e macFas5.chr5 484107 191 - 189454096 I e rheMac3.chr5 483053 194 - 184069350 I a score=104352.000000 s hg38.chrUn_KI270754v1 824 45 + 40191 CACAGGTTTCTGTCACCACTTTGCCTTGAAATTGGAGGCCTCAGT s panTro4.chr4_GL389869_random 28125 45 + 69473 CACAGGTTTCTGTCACCACTTTGCCTTGAAATTGGAGGCCTCAGT i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19311039 45 + 23176937 CACAGGTTTCCGTCACCACTTTGCCTTGAAATTGGAGGCCTCAGT i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1380263 45 - 115148730 CACAGGTTTCTGTCACCACCTTGCCTTGAAATTGGAGGCCTCAGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 483247 45 - 184069350 CACAGGTTTCCGCCACCACTTTGCCTGGAAATTGGAGTCCTCAGT i rheMac3.chr5 I 194 C 0 s macFas5.chr5 484298 45 - 189454096 CACAGGTTTCCGCCACCACTTTGCCTGGAAATTGGAGTCCTCAGT i macFas5.chr5 I 191 C 0 s papAnu2.chr5 382537 45 - 178775436 CACAGGTTTCTGCCACCACTTTGCCTGGAAATTGGAGTCCTCAgt i papAnu2.chr5 I 192 C 0 s calJac3.chr3 408343 27 + 190850796 CACA------------------GCCTAAAAATTGGAGGCCTCAGT i calJac3.chr3 C 0 I 310 s canFam3.chr16 41755686 45 + 59632846 TGCTAGTTGATGCCACCCCTTTGACCAGAGGCTGGAGGCCTCAGT i canFam3.chr16 C 0 C 0 e rhiRox1.KN298591v1 154468 3265 - 927060 I a score=254166.000000 s hg38.chrUn_KI270754v1 869 124 + 40191 TATGAATTTTATAACAACATCCTC-AAATAAGGCCTCACTTTG----CAGTGGGTGCCTAACTTAAGGATGATTTTTAAATGACTGTGtcatgtttgtaaagacactt--------------------------------------------------------------------------------------------------------------------------------------------------------tgtacttatcgaagtgcttgc s panTro4.chr4_GL389869_random 28170 124 + 69473 TATGAATTTTATAACAACATCCTC-AAATAAGGCCTCACTTTG----CAGTGTGTGCCTAACTTAAGGATGATTTTTAAATGACTGTGtcatgtttgtaaagacactt--------------------------------------------------------------------------------------------------------------------------------------------------------tgtacttatcgaagtgcttgc i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19311084 123 + 23176937 TATGAATTTTAT-ATAACATCCTC-AAATAAGGCCTCACTTTG----CAGTGTGTGCCTAACTTAAGGATGATTTTTAAATGACTGTGtcatgtttgtaaagacactt--------------------------------------------------------------------------------------------------------------------------------------------------------tgtacttatcgaagtgcttgc i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1380308 121 - 115148730 TATGAATTTTAT---AACATCCTC-AAATAAGGCCTCACTTTG----CAGTGTGTGCCTGACTTAAGGATGATTTTTAAATGACTGTGTGATGtttgtcaagacactt--------------------------------------------------------------------------------------------------------------------------------------------------------tgtacttatcgaagtgcgtac i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 483292 168 - 184069350 TATGAATTTTATAATAACATCCTC--AACAAGGCCTCAGTTTG----CAGTGTGTGCCTGACTTAAGGATGATTTTTAAATGACCACATCATGTTTGTAAAGACACTTTGTACTTGTCGG-GTGCTTGCATATACACTGTGTCAGTTAATTctt----------------------------------------------------------------------------------------------------------tgtacttgtcggagtgcttgc i rheMac3.chr5 C 0 C 0 s macFas5.chr5 484343 214 - 189454096 TATGAATTTTATAATAACATCCTC--AACAAGGCCTCAGTTTG----CAGTGTGTGCCTGACTTAAGGATGATTTTTAaatgaccacatcatgtttgtaaagacactttgtacttgtcggagtgcttgcatatacactgtgtcagttaat--tctTTGTACTTGCCGGATGCTTGCGTATACACTGTCTCAGTTAATTctt-----------------------------------------------------------tgtacttgtcggagtgcttgc i macFas5.chr5 C 0 C 0 s papAnu2.chr5 382582 214 - 178775436 tatgaattttataataacGTCCTC--AACAAGGCCTCAGTTTG----CAGTGTGTGCCTGACTTaaggatgatttttaaatgaccaCATCATGTTTGTAAAGACACTTTGTACTTGTCGGAGTGCTTGCATATACACTG-------------------------------------------------------------TGTCAGTTAATTCTTTGTACTTGCCGGATGCTTGCGTATACACTGTCTCAGTTAATTCTTTGTACTTGTCGGAGTGCTTGC i papAnu2.chr5 C 0 C 0 s calJac3.chr3 408680 124 + 190850796 TATGGATTTTTTAACAACATCCTC-AAATAAGGCCTTACTTTG----CAGTATGTTTCTAACTTAAGGATGATTTTTAAATGCCCGTGTCATGTTTGCAAAGACAGTC--------------------------------------------------------------------------------------------------------------------------------------------------------TGTACTTGTCGAAGTGCTTGC i calJac3.chr3 I 310 C 0 s canFam3.chr16 41755731 126 + 59632846 TATGAATTTTATAATAGTATCCCCCAAATGGGGCTTTATGTAATAGTCAGTGTATGCCTCATTTAAAGATGATTtaataaggatcatgttgtgtttgtgaaaacactt--------------------------------------------------------------------------------------------------------------------------------------------------------catactt---gaagtgtttac i canFam3.chr16 C 0 C 0 e rhiRox1.KN298591v1 154468 3265 - 927060 I a score=1256034.000000 s hg38.chrUn_KI270754v1 993 689 + 40191 atatataccatctcatttaatgcttgccaagattctgttaggtatgcgaggcaggtactgttatcttcactttatga---atgaggaaaaggcacacagaagctaaTAACAAGTGAAGTCAACACTGGGTCTGAAATTTGTAAACTCTGATATAAAAAAGAAATCATATCTCTGGAAAGAAAACTGTTGCAAACTATACACCTGCTTTCCAAAAC--ATGTGTGGCTCTTCAGTAGCTATTTTGCTGCCTTCTACCTACTCCGGTGTGCTGTTGGCTATGTCCAGTGCTGAGGACTGGGGAGGAGGCTTTTCTTCCCGCTTTAGGATCATGGTGATGTCCTTGCTGAGGACTGGGGAGGAGGCTTTTCCTCCCACTTT-AGGATCATG--GTGATGTCCTTCCAGAATTTGAACTGTGCTTTGGTCCTGAGCATGTCCTGGGGTGCAACATTCATTGTTCTCATTTGTTAGAGAATACAAGATCAGAATTTAAATAGTCACTGTTTTCCAAGATGCAAAGTGATACGCTCTT-GGTGTTTTAAAATCCTATCTGTTGATCTGATTGGCTGGTATTCCAGTCTTCC-CTGTTTATTGCTCTGTGACTGGTGGGATTTGCCAATAGGTCCAAGTACTTTCTCTTTCCAGAAGCATACCATAATATTGGTGTAGGATT-TGTGGCCGGAACTTACTGGGCATC s panTro4.chr4_GL389869_random 28294 689 + 69473 atatataccatctcatttaatgcttgccaagattctgttaggtatgcgaggcaggtactgttatcttcactttatga---atgaggaaaaggcacacagaagctaaTAACAAGTGAAGTCAACACTGGGTCTGAAATTTGTAAACTCTGATATAAAAAAGAAATCGTATCTCTGGAAAGAAAACTGTTGCAAACTATACACCTGCTTTCCAAAAC--ATGTATGGCTCTTCAGTAGCTATTTTGCTGCCTTCTACCTACTCCAGTGTGCTGTTGGCTATGTCCGGTGCTGAGGACTGGGGAGGAGGCTTTTCTTCCCGCTTTAGGATCATGGTGATGTCCTTGCTGAGGACTGGGGAGGAGGCTTTTCCTCCCACTTT-AGGATCATG--GTGATGTCCTTCCAGAATTTGAACTGTGCTTTGGTCCTGAGCATGTCCTGGGGTGCAACATTCATTGTTCTCATTTGTTAGAGAATACAAGATCAGAATTTAAATAGTCACTGTTTTCCAAGATGCAAAGTGATACGCTCTT-GGTGTTTTAAAATCCTATCTGCTTATCTGATTGGCAGGTATTCCAGTCTTCC-CTGTTTATCGCTCTGTGACTGGTGGGATTTGCCAATATGTCCAAGTACTTTCTCTTTCCAGAAGCATACCATAATATTGGTGTAGGATT-TGTGGCcagaacttactgggcatc i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19311207 634 + 23176937 atatataccatctcatttaattcttgccaagattctgttaggtatgcgaggcaggtactgttatcttcactttatga---atgaggaaaagacacacagaagctaataactAGTGAAGCCAACACTGGGTCTGAAATTTGTAAACTCTGATATAAAAAAGAAATTGTATCTCTGGAAAGAAAACCGTTGCAAACTATACACCTGCTTTCCAAAAC--ATGTGTGGCTCTTCAGTAGCTATTTTGCTGCCTTCTACCTACTCCAGGGTGCTGTTGGCTACGTCCAGTGCTGAGAACCGGGGAGGAGGCTTTTCT--------------------------------------------------------TCCCACTTT-AGGATCATG--GTGATGTCCTTCCAGAATTTGAACTGTGCTTTGATCCTGAGCGTGTCCTGGGGTGCAACATTCATTGTTCTCATTTGTTAGAGAATACGAGATCAGAATTTAAATAGTCACTGTTTTCCAAGATGCAAAGTGATATGCTGTTAGGTGTTTTAAAATCCTATCTGTTGATCTGATAGGCTGGTATTCCAGTCTTCC-CTGTTTATCGCTCTGTGACCGGTGGGATTTGCCAATAGGTCCACGTACTTTCTCTTTCCAGAAGCATACCGTAATATTGGTGTAGGATT-TGTGGCCAGAACTTACTGGGCATC i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1380429 688 - 115148730 atatataccatctcatttaattcttgccaagattctgctaggtatgcgaggcaggtgctgttatcttcactttatga---atgaggaaaagacacacagaagctaaTAACAAGTGGAGCCAACACTGGGTCTGAAATTTGTAAACTCTGATATAAAAAAGAAATCATACCTCTGGAAAGAAAACTGTTGCAAACTATACACCTGCTTTCTAAAAC----GTGTGGCTCTTCACTAGCTATTTTGCTGCCTTCTACCTGCTCCAGTGTGCTGTTGGCTACGTCCAGTGCTGAGGACTGGGGCGGAGGCTTTTCCTCCCACTTTAGGGTCATGGTGATGATCTTGCTGAGGACTGGGGAGGAGGCTTTTCTTCCCACTTT-AGAATCATG--GTGATGACCTTCCAGAATTTGAACTGTGCTTTGGTCCTCAGCATGTCCTGGGGCGCAACATTCATTGTTTTCATTTGTTAGAGAATACAAGATCAGAATTTAAATAGTCACTGTTTTCCAAGATGCAAAGTGATATGCTGTTAGGTGTTTTAAAATCCTGTCTGTTGATCTGATTGGCTGGTATTCCAGTCTTCC-CTGTTTATCGCTCTGTGACCGGTGGGATTTGCCAATAGGTCCAGGTACTTTCTCTTTCCAGAAGCGTACCGTAATATTGGTGTAGGATT-TGTGGCcagaacttactgggcatc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 483460 631 - 184069350 atatgcaccatctcagttaattcttgccaagattctgtttggtatgcaaggcaagtgctattatcttcactttatga---atgaggaaaagacacacagaagctaaTAATAAGTGGAGCCAACATTGGCTCTGAAATTTGTAAACTCTGACATAAAAAAGAAATCATATCTCTGGAAAGAAAACTGCTACAAACTGTACACCTGCTTTCTAAGAC--ATGTGTGGCTCTTCACTGTTGATTTTGCTGCCTTCTACCTCCTCCAGTGTGCTGTTGGCTACGCCCAGCACTGAGGACTGGGAAGGAGGCTTCT----------------------------------------------------------TCCCACTTT-GGGATCATG--GGGATGTCCTTCCAGAATTTGAACTGTG-TTTGGTCCCGAGCTTGTCCTGGGATGCAACGTTCATTGTTCTCATTTGCTAGAGAATACAAGATCAGAATTTAAATAGTCACTGTTTTCCAAGATGCAAAGTGATATGCTGTTATTTGTTTTAAAATCCTATCTGTTGATCTGATTGGCTGGTATTCCAGTATTCC-CTGTTTATCGCTCTGTGTCCAGTGGGATTTGCCAATAGATCCGGGTACATTCTCTTTCCAGAAGCACACCATAATATTGGTGTAAGATT-TGTGGCCAGAACTTACTGGGCATC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 484557 631 - 189454096 atatgcaccatctcagttaattcttgccaagattctgtttggtatgcaaggcaagtgctattatcttcactttatga---atgaggaaaagacacacagaagctaaTAATAAGTGGAGCCAACATTGGCTCTGAAATTTGTAAACTCTGACATAAAAAAGAAATCATATCTCTGGAAAGAAAACTGCTACAAACTGTACACCTGCTTTCTAAGAC--ATGTGTGGCTCTTCACTGTTGATTTTGCTGCCTTCTACCTCCTCCAGTGTGCCGTTGGCTACGCCCAGCACTGAGGACTGGGAAGGAGGCTTCT----------------------------------------------------------TCCCACTTT-GGGATCATG--GGGATGTCCTTCCAGAATTTGAACTGTG-TTTGGTCCCGAGCTTGTCCTGGGATGCAACGTTCATTGTTCTCATTTGCTAGAGAATACAAGATCAGAATTTAAATAGTCACTGTTTTCCAAGATGCAAAGTGATATGCTGTTATTTGTTTTAAAATCCTATCTGTTGATCTGATTGGCTGGTATTCCAGTCTTCC-CTGTTTATCGCTCTGTGTCCAGTGGGATTTGCCAATAGATCCGGGTACATTCTCTTTCCAGAAGCACACCATAATATTGGTGTAAGATT-TGTGGCCAGAACTTACTGGGCATC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 382796 631 - 178775436 ATATGCACCATCTCAGTTAATTCTTGCCAAGATTCTGTTTGGTATGCAAGGCAAGTGCTATTATCTTCACTGTATGA---ATGAGGAAAAGACACACAGAAGCTAATAATAAGTGGAGCCAACATTGGCTCTGAAATTTGTAAACTgtgacataaaaaagaaatcatatctCTGGAAAGAAAACTGCTACAAACTGTACACCCGCTTTCTAAAAC--ATGTGTGACTCTTCACTGTTGATTTTGCTGCCTTCTACCTCCTCCAGTGTGCTCTTGGCTACGCTCAGCACTGAGGACTGGGAAGGAGGCTTCT----------------------------------------------------------TCCCACTTT-GGGATCATG--GGGATGTCCTTCCAGAATTTAAACTGTG-TTTGGTCCCGAGCTTGTCCTGGGATGCAACGTTCATTGTTCTCATTTGCTAGAGAATACAAGATCAGAATTTAAATAGTCACTGTTTTCCAAGATGCAAAGTGATATGctgttatttgttttaaaatcctaTCTGTTGATCTGATTGGCTGGTATTCCAGTCTTCC-CTGTTTATCGCTCTGTGTCCAGTGGGGTTTGCCAATAGATCTGGGTACATTCTCTTTCCAGAAGCACACCATAATATTGGTGTAAGATT-TGTGGCCAGAACTTACTGGGCATC i papAnu2.chr5 C 0 C 0 s canFam3.chr16 41755857 622 + 59632846 agaaacatcgtctcatgtggttcttacccaaatcctgtttgatatgcgaggcaggtactattatctctactttatgggttgtgagatagaggctca---gagCTAATTATTAGTGGAGCCAGCATCAGGCTCCAAATTGGTGAAATTGG---TAAAAAAAAAATCATATATCTGAAAAGAAAATAGTTGTACATTGCAAATCTAGTTTCTAAAAAAAAAGTGTGATCATTTGGCTTTGTTTTTGTTGCCTTTATTAT----CAACGTGTTGTTGGCTATGTTCAGCTCTGAGGA---AAAAGACAGCATTACCTCT-----------------------------------------------------TCTCACTCTAAGGGCCATGGAGTGACATTCTCCAAGAATTTAAAATGTATTTTGGTTATGATTGTGTCTTGGGGTGCAATATTTATTGTT---------TGTAGAATATATGAACAGAATTTTAATAGTCATTAGACTATAAGATGCAAACTTACATGCTCCTGGATTTTTAAAAATCCTttctagtgatgtgatcaactagtattccaatcctcctctgtttacagttctgtgaccagtgggatttgccaacaggtctgagtattttcccctttcacaagcataaaataacaatggggtaggattctgtggttagaacttattaggc--- i canFam3.chr16 C 0 C 0 e rhiRox1.KN298591v1 154468 3265 - 927060 I e calJac3.chr3 408804 0 + 190850796 C a score=910.000000 s hg38.chrUn_KI270754v1 1682 1 + 40191 A s panTro4.chr4_GL389869_random 28983 1 + 69473 a i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19311841 1 + 23176937 A i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1381117 1 - 115148730 a i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 484091 1 - 184069350 A i rheMac3.chr5 C 0 I 1 e rhiRox1.KN298591v1 154468 3265 - 927060 I e canFam3.chr16 41756479 0 + 59632846 C e calJac3.chr3 408804 0 + 190850796 C e papAnu2.chr5 383427 0 - 178775436 C e macFas5.chr5 485188 0 - 189454096 C a score=82284.000000 s hg38.chrUn_KI270754v1 1683 111 + 40191 CCCCAGTTACTGtcctaatacctcatattgtgtcagaagctgacaataggagttgaaaatgccataatatgaatctgttctcatagtgaagatcgtaatgagaacgggaaa s panTro4.chr4_GL389869_random 28984 111 + 69473 ccccagttactgtcctaatacctcatattgtgtcagaagctgacaataggagttgaaaatgccataatatgaatctgttctcatagtgaagatcgtaatgagaacgggaaa i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19311842 111 + 23176937 CCCCAGTTAGTGTTCTAATACCTCATATTGTGACAGAAGCTAACAATAGGAGTTGAAAATGCCATAATATGAATCTGTTCTCACAGTGAAGATTGTAATGAGAATGGGAAA i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1381118 111 - 115148730 ccccagttagagtcctaacacctcacgttgtgacagaagctgacaataggagttgaaaatgccataatatgaatctgttctcacagtgaagattgtagtgagaacgggaaa i nomLeu3.chr7b C 0 C 0 s canFam3.chr16 41756479 105 + 59632846 -----tttaaaattctaatacctcatactgtgaca-aagatgataatagaagttgaaaatgccacaatatgaatctattctcatgacaacgattgtaatgaaaatgggaaa i canFam3.chr16 C 0 C 0 e rhiRox1.KN298591v1 154468 3265 - 927060 I e calJac3.chr3 408804 0 + 190850796 C e papAnu2.chr5 383427 0 - 178775436 C e macFas5.chr5 485188 0 - 189454096 C e rheMac3.chr5 484092 1 - 184069350 I a score=2692.000000 s hg38.chrUn_KI270754v1 1794 2 + 40191 ag s panTro4.chr4_GL389869_random 29095 2 + 69473 ag i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19311953 2 + 23176937 AG i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1381229 2 - 115148730 ag i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 485188 2 - 189454096 AA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 383427 2 - 178775436 AA i papAnu2.chr5 C 0 C 0 s canFam3.chr16 41756584 2 + 59632846 ag i canFam3.chr16 C 0 C 0 e rhiRox1.KN298591v1 154468 3265 - 927060 I e calJac3.chr3 408804 0 + 190850796 C e rheMac3.chr5 484092 1 - 184069350 I a score=923019.000000 s hg38.chrUn_KI270754v1 1796 457 + 40191 ctgcagaccgaaccagttctcattatgttctgaagCCACATTTCCTCCCCACAACATGAATTGTATGGTCCAGGCTCTTTAATCAAGAAATGTTCCATTTGAAAGCATTCCTCATCCCACAGAAAACACAAATTTCACTTTGGAGCACATATCTAGTAGGAGAATTTGTTTTCTCATTCAATTAACCAGATTGAAAATGTAAGAA-CACTATTATGGAAGCTTCAATGTCAA---------------------TGTGTGTGTGTATGATGATTGTTGCTAATTAAAAATAAGCTGATTTAGGACATTTGAAGCAAAGAAGCACTCACATT------CCCTTATCTCAGCATTTAAACAGTGCCTGGACTCTGTGCCCTCTGCCCACATTATCTGGCTGTGCGTGGCATA--GCTTCTGGCTGCAA-TAGTGGGAAAGAATTTAGCAGATGTTCAAAAACAAATACATTGTTAGCTTATATTGTTATTG s panTro4.chr4_GL389869_random 29097 457 + 69473 ctgcagaccgaaccagttctcattatgttctgaagCCACATTTCCTCCCCACAACATGAATTGTATGGTCCAGGCTCTTTAATCAAGAAATGTTCAATTTGAAAGCATTCCTCATCCCACAGAAAACACAAATTTCACTTTGGAGCACATATCTAGTAGGAGAATTTGTTTTCTCATTCAATTAACCAGATTGAAAATGTAAGAA-CACTATTATGGAAGCTTCAATGTCAA---------------------TGTGTGTGTGTATGATGATTGTTGCTAATTAAAAATAAGCTGATTTAGGACATTTGAAGCAAAGAAGCCCTCACGTT------CTCTTATCTCAGCATTTAAACAGTGCCTGGACTCTGTGCTGTCTGCCCACATTATCTGGCTGTGCGTGGCATA--GCTTCCGGCTGCAA-TAGTGGGAAAGAATTTAGCAGATGTTCAAAAACAAATACATTGTTAGCTTTTTTTGTTGTTG i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19311955 453 + 23176937 CTGCAGACCAAACCAGTTCTCATTATGTTCTGAAGCCAAATCTCCTCCCCACAACATGAATTGTATGGTCCAGGCTCTTTAATCAAG-AATGTTCCATTTGAAAGCATTCCTCATCCCACAGAAAACACAAATTTCACTTTGGAGCACCTATCTAGTAGGAGAATTTGTTTTCTCATTCAATTAACCAGATTGAAAATGTAAGAA-CACTATTATGGAAGCTTCAATGTCAA---------------------TGTGTGTGTGTATGATGATTGTTGCTAATTAAAAATAAGCCGATTTAGGACATTTGAAGCAAAGAAGCACTCATGTT------CCCTTATCTTAGCATTTAAACAGCGCCTGGACTATGTGCTCTCTGCCCACATTATCTGGCTGTGTGTGGCGTA--GCTTCCAGCTGCAG-TAGTGGGAAAGAATTTAGTAGATGTTCAAACACAAATATATAGTTAGCTTTTTTTG---TTG i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1381231 452 - 115148730 ctgcagaccgaaccagttctcattatgttctgaagCCAAATTTCCTCCCCACAACATGAATTGTATGGTCCAGCCTCTTTAATCAAG-AATGTTCCATTTGAAAGCATTCTTCATCCCACAGAAAACATAAATTTCACTTTGGAGCACCTATCTAGTAGGAGAATTTGGTTTCTCATTCAGTTAACCAGATTGAAAATGTAAGAA-CACTATTATGGAAGCTTCAATGTCAA---------------------TGTGTGTGTGTATGATGATTGTTGCTAATTAAAAATAGGCTGATTTAGGACGTTCGAAGCAAAGAAGCACTCACGTT------CCCTTATCTCAGCATTTAAACAGTGCCTGGACTGTGTGCTCTCTGCCCACATTATCCGGTTGTGTGTGGCATC--GCTTCTAGCTGCAA-TAGTGGGAAAGAATTTAGTAGATGTTCAAACATAAATATATTCTTAGCTTTTTTT----TTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 484093 454 - 184069350 CTGCAGACCAAACCAGTTCTCATTATGTTCTGAAGCCAAATTTTCCCTCTGCAACATGAATGGTATTGTCCAGGCTCTTCAATCAAG-AATGTTCCATTTGAAGGCATTCCTCATCCAGCAGAAAACATAAATTTCACTTTGGAGCACCTATCTAGTAGGAGAATTTGTTTTCTCATTCAATTAACCAAATTGAAAATGCAAGAA-CACTATTATGGAAGCTTCAATGTCAA-------------------TGTGTGTGTGTGTATGACGATTGTTGCTAATTAAAAATAAGCCGATTTAGGACGTTTGAAGCGAGGAAGCACTCACATT------CCCTTATTTCAGCATTTATACAGCGCCTGGACTGTGTGCTCTCTGCCCACATTATCTGGCTGTGCCTGGCATA--GCTTCCAGCTGCAA-TAGTGAGAAAGAATTTAGCAGATGTTCAAACACAAATATATTGTTAGCTTTTCTG----TTG i rheMac3.chr5 I 1 C 0 s macFas5.chr5 485190 454 - 189454096 CTGCAGACCAAACCAGTTCTCATTATGTTCTGAAGCCAAATTTTCCCTCTGCAACATAAATGGTATTGTCCAGGCTCTTCAATCAAG-AATGTTCCATTTGAAGGCATTCCTCATCCAGCAGAAAACATAAATTTCACTTTGGAGCACCTATCTAGTAGGAGAATTTGTTTTCTCATTCAATTAACCAAATTGAAAATGCAAGAA-CACTATTATGGAAGCCTCAATGTCAA-------------------TGTGTGTGTGTGTATGACGATTGTTGCTAATTAAAAATAAGCCGATTTAGGACGTTTGAAGTGAGGAAGCACTCACATT------CCCTTATTTCAGCATTTATACAGCGCCTGGACTGTGTGCTCTCTGCCCACATTATCTGGCTGTGCCTGGCATA--GCTTCCAGCTGCAA-TAGTGAGAAAGAATTTAGCAGATGTTCAAACACAAATATATTGTTAGCTTTTCTG----TTG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 383429 456 - 178775436 CTGCAGACCAAACCAGTTCTCATTATGTTCTGAAGCCAAATTTTCCCTCTGCAACATGAATGGTATTGTCCAGGCTCTTCAATCAAG-AATGTTCCATTTGAAGGCATTCCCCATCCGGCAGAAAACATAAATTTCACTTTGGAGCACCTATCTAGTAGgagaatttgttttctcattcaaTTAACCAAATTGAAAATGCAAGAA-CACTATTATGGAAGCTTCAatgtcaa-----------------tgtgtgtgtgtgtgtatgacgaTTGTTGCTAATTAAAAATAAGCCGATCTAGGACGTTTGAAGCGAAGAAGCACTCCCATT------CCCTTATTTCAGCATTTATACAGCGCCTGGACTGTGTGCTCTCTGCCCACATTATCTGGCTGTGCCTGGCATA--GCTTCCAGCTGCAA-TAGTGAGAAAGAGTTTAGCAGATGTTCAAACACAAATATATTGTTAGCTTTTCTG----TTG i papAnu2.chr5 C 0 C 0 s canFam3.chr16 41756586 471 + 59632846 ctgcaggatgaacccattctcattatgttctgaagCCAAATTTCCTGCCTTCAGCATGAATCGTATTGTCTGGTCTCTTTAATCAAG-GATGTTCCATTTGAAGGAATATCATATGTAGCAGAAAACATAAATTCCACTTCTGAGCACCTGTCTACTAGGAGAATCTGTTGCCTCATTCAATTAACCAAGTTGGAA---TAAAAACCACTATTTTAGAATCCTCATTATAGAAGATAAATATTTGTGTGTATGTATGTTTGTGTGTGATGATTGTCACTAATTAAAAGTTAACTGATTTGGGACATTTGAAGCA---AAGTGCTTATATTGTCCTCCCCCTATGACAATATTTACAAAGGGCCTAGGCAATATGCTCTCTGTCCAAATGATTT-GCCATGAATGTCCTAATGCTTATAGGTGTGATTAGTGGAAAGGGGTTTAGTAAGTACTCAAACAAAAATATTTTGTTAGTTGTTA--------- i canFam3.chr16 C 0 C 0 e rhiRox1.KN298591v1 154468 3265 - 927060 I e calJac3.chr3 408804 0 + 190850796 C a score=1746977.000000 s hg38.chrUn_KI270754v1 2253 692 + 40191 TTGTTAAGGCTGCTTCACGTATTTTAAATTTTTCTTTTCCTTCTGGGAGAGGAGTTACTACTATTAACAATTCTGCA--------------CATTGCTTGAGGCAATGATAAACCATATTACCCTATTTATTTTACTCTCATTGCTATTTGAGAAAATGG-TGGGCCATATATGCTTGTAGATTAGCTGGTGTCTTTTTGAAGCTACTGGCAAGGCTATGTTTAAAGTTTCAATTCTAATAAAAATGTGTTTAAAGCAACCAATGGCACCGTACAGGGAATGGCAGAGGAAAGGTCATTCTGTGTGTCCTGCAGCCTCAGAAGTGGGATCTTCCCCACACTTTTCTGTGAAGACAATGCAATTCAGAGCAGAGACATCTTCAAAGCTGCTTTGCACATGA----TGGTAATGAAGGATTGCAATGTGAGATCACTGGGATTCCCAATACCACAAACACTGGTGTTATGAAAGG-ATGCTTAGTCCCAGCATGCCTAAGAAAACTAAATC-TGATTCCTAGTCTTGGAAATCCCATCTCATGCATGATGC--------------CATG-TTTCCAAAACTGGAACATTTCTACTGACTTATTTCCATGACTTCCTTTGCTCCAG-------CCACTGAACACTCACTCCCGGTGTGTCCTTACTAAAATGTTAGTTAATGTGT-TATCTGTTCATGATA-GTGCAGCTGTCTGCATAACTTCTGTGTAtttgtttatt s panTro4.chr4_GL389869_random 29554 692 + 69473 TTGTTAAGGCTGCTTCACGTATTTTAAATTTTTCTTTTCCTTCTGGGAGAGGAGTTACTACTATTAACAATTCTGCA--------------CATTGCTTGAGGCAATGATAAACCATATTACCCTATTTATTTTACTCTCATTGCTATTTGAGAAAATGG-TGGGCCATATATGCTTGTAGATTAGCTGGTGTCTTTTTGAAGCTACTGGCAAGGCTATGTTTAAAGTTTCAATTCTAATAAAAATGTGTTTAAAGCAACCAATGGCACCGTACAGGGAGTGGCAGAGGAAAGGTCATTCTGTGTGTCCTGCAGCCTCAGAAGTGGGATCTTCCCCACACTTTTCTGTGAAGACCATGCAATTCAGAGCAGAGACATCTTCAAAGCTGCTTTGCACATGA----TGGTAATGAAGGATTGCAATGTGAGGTCACTGGGATTCCCAATACCACAAACACTGGTGTTATGAAAGG-ATGCTTAGTCCCAGCATGTCTAAGAAAACTAAATC-TGATTCCTAGTCTTGGAAATCCCATCTCATGCATGATGC--------------CATG-TTTCCAAAACTGGAACGTTTCTACTGACTTATTTCCATGACTTCCTTTGCTCCAG-------CCACTGAACACTCACTCCTGGTGTGTCCTTACTAAAATGTTAGTTAATGTGT-TATCTGTTCATGATA-GTGCAGCTGTCTGCATAACTTCTGTGTAtttgtttatt i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19312408 690 + 23176937 TTGCTAAGGCTGCTTCAGGTATTTTAAATTTTTCTTTTCCTTCTGGGAGAGGAGTTACTACTATTAACAATTCTGCA--------------CATTGCTTGAGGCAATGATAAATTATATTACCCTATTTATTTTACTCTCATTGCTATTTGAGAAAATGG-TGGGCCATATATGCTTGTAGATTAGCTGGTGTCTTTTTGAAGCTACTGGCAAGGCTACGTTTAAAGTTTCAATTCTAATAAAAATGTG-TTAAAGCAACCAATGGCACCGTATAGGGAATGGCAGAGGGAAGGTCATTCTGTGTGTCCTACAGCCTCAGAAGTGGGATCTTCCCCACACTTTTCTGTGAAGACAATGCAATTCAGAGTAGAGACATCTTCGAAGCTGCTTTGCACATGA----TGGTAATGAAGGATGGCAATGTGAGGTCACTGGGATTCCCAATACCACAGACACTGGTGTTATGAAAGG-ATACATAGTCCCAGCATGCCTAAGAAAACTAAATC-CGATTCCT-GTCTTGGAAATCCCATCTCATGCGTGATGC--------------CATG-TTTCCAAAACTGGAATATTTCTACTGACTTATTTCCATGACTTCCTTATCTCCAG-------CCACTGAACACTCACTACCAGTGTGTCCTTACTAAAATGTTAGTTAATGTGT-TATCTGTTCGTGATA-GTTCAGCTGTCTGCATAACTTCTGTGtatttatttatt i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1381683 691 - 115148730 TTGTTAAGGTGGCTTCAGGTATTTTAAATTTTTCTTTTCCTTCTGGGAGAGGAGTTAATACTATTAAGAATTCTGCA--------------CATTGCTTGAGGCAATGATAAAGCATAGTACCTTATTTATTTTACTCTCATTGTTATTTGAGAAGATGA-TGGGCCATATATGCTTGTAGATTAGCTGGTGTCTTTTCGAAGCTACCGGCAAGGCTATGTTTAAAGTTTCAATTCTAATAAAAATGTG-TTAAAGCAACCAATGGCACCATATAGGGAATGGCAGAGGGAAGGTCATTCTGTGTGTCCTACAGCCTCAGAAGTGGGATCTTCCCCACCCTTTTCTGTGAAGACAATGCAATTCAGAGCAGAGGCATCTTCGAAGCTGCTTTGCACGTGA----TGGTAATGAAGGATTGCAATGTGAGGTCACTGGGATTCCCAATACTACAGACACTGGTGTTATGAAAGG-ATGCTTAGTCCCAGCATGCCTAAGAAAATGAAATC-TGATTCCTAGTCTTGGATATCCCATCTCATGCGTGATGC--------------TGCG-TTTCCAAAACTGGAACATTTCTGCTGGCTTATTTCCATGACTTCCTTTTCTCCAG-------CCACTGAACACTCACTCCTGGTGTGTCCTTACTAAAACGTTAGTTAATGTAT-TATCTGTTCATGACA-GTTCAGCTGTCTGCATAACTTCTGTGTAtttatttatt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 484547 691 - 184069350 TTGCTAAGGCTGCTTCAGGTATTTTACATTTTTCTTTTCCTTCTGGGAGAGGAGTTACTACTATTAACAATTCTGCA--------------CATTGCTTGAGGCAATGATAAAGCATATTACCCTATTTATTTTACTCTCGTTGTTATTTGAGAAGGTGG-TGGGCCAGACATGCTTGTAGATTAGCTGGTATCTTTTTGAAGCTACTAGCAAGGCTATGTTTAAAGTTTCAGTTGTAATAAAAACGTG-TTAAAGCAACCAATGGCACTGTATAGGAAATGCCAGAGGGAAGGTCATTCTGTGTGTCCTACGGCCTCAGAAGTGGGATCTTCCGCGCACTTTTCTGTGAAGACAACGCAATTCATAGCAGAGACATCCTCGAAGCTGCTTTGCACATGA----CGGTAATGAAGGATTGCTGTGTGAGGCCACTGGGATTCCCACTACCACAGACACTGGTGTTCTGAAAGG-ATCCTTAGTCCCAGCACGCCTAAGAAAGCAGAATC-TGATTCCTAGTCTTGGAAATCCCATCTCAGGCATGATGC--------------CATG-TTTCCAGAACTGGAACATTTCTACTGACTTATTTCCATGACTTCTTTTTCTCCAG-------CCACTGAACACTCACTCCTGGTGTGTCCTTACTAAAACATTAGTTAATGTAT-TATTTATTCATGATA-GTTCAGCTGTCTGCATAACTTCTGTGCttttatttatt i rheMac3.chr5 C 0 C 0 s macFas5.chr5 485644 691 - 189454096 TTGCTAAGGCTGCTTCAGGTATTTTACATTTTTCTTTTCCTTCTGGGAGAGGAGTTACTACTATTAACAATTCTGCA--------------CATTGCTTGAGGCAATGATAAAGCATATTACCCTATTTATTTTACTCTCGTTGTTATTTGAGAAGGTGG-TGGACCAGACATGCTTGTAGATTAGCTGGTATCTTTTTGAAGCTACTAGCAAGGCTATGTTTAAAGTTTCAGTTGTAATAAAAACGTG-TTAAAGCAACCAATGGCACTGTATAGGAAATGCCAGAGGGAAGGTCATTCTGTGTGTCCTACGGCCTCAGAAGTGGGATCTTCCGCGCACTTTTCTGTGAAGACAACGCAATTCATAGCAGAGACATCCTCGAAGCTGCTTTGCACATGA----CGGTAATGAAGGATTGCTGTGTGAGGCCACTGGGATTCCCACTACCACAGACACTGGTGTTCTGAAAGG-ATCCTTAGTCCCAGCACGCCTGAGAAAGCAGAATC-TGATTCCTAGTCTTGGAAATCCTATCTCAGGCATGATGC--------------CATG-TTTCCAGAACTGGAACATTTCTACTGACTTATTTCCATGACTTCTTTTTCTCCAG-------CCACTGAACACTCACTCCTGGTGTGTCCTTACTAAAACATTAGTTAATGTAT-TATTTATTCATGATA-GTTCAGCTGTCTGCATAACTTCTGTGCttttatttatt i macFas5.chr5 C 0 C 0 s papAnu2.chr5 383885 691 - 178775436 TTGCTAAGGCTGCTTcaggtattttacatttttcttttccttctgggaGAGGAGTTACTACTATTAATAATTCTGCA--------------CATTGCTTGAGGCAATGATAAAGCATATTACCCTATTTATTTTACTCTCATTGTTATTTGAGAAAGTGG-TGGGCCAGACATGCTTGTAGATTAGCTGGTATCTTTTTGAAGCTACTAGCAAGGCTATGTTTAAAGTTTCAGTTGTAATAAAAACGTG-TTAAAGCAACCAATGGCACTGTATAGGAAATGTCAGAGGGAAGGTCATTCTGTGTGTCCTACGGCCTCAGAAGTGGGATCTTCCGCACACTTTTCTGTGAAGACAATGCAATTCATTGCAGAGACATCTTCGAAGCTGCTTTGCACATGA----CGGTAATGAAGGATTGCTGTGTGAGGCCACTGGGATTCCCACTACCACAGACACTGGTGTTCTGACAGG-ATCCTTAGTCCCAGCACGCCTAAGAAAGCAGAATC-TGATTCCTAGTCTTGGAAATCCTGTCTCAGGCACGATGC--------------CATG-TTTCCAGAACTGGAACATTTCTACTGACCTATTTCCACGACTTCTTTTTCTCCAG-------CCACTGAACACTCACTCCCGGTGTGTCCTTACTAAAACATTggttaatgtat-tatttattcatgATA-GTTCAGCTGTCTGCATAACttctgtgcttttatttatt i papAnu2.chr5 C 0 C 0 s calJac3.chr3 408804 683 + 190850796 TTGCTAAGGCTGCTTCAGGTATTTTAGATTTTTCTTTTCCTTTTGGGAGAGGAGTCACTTCTATTAACAATTCTGCA--------------CATTGCTTGAGGCGATGATAAAGCATATTACCCTATTTATTTTA--CTCATTGTTATTTGAGAATGTGG-TGG-CCAAATATGCTTGTGGATTATCTGGTGTCTTTTTGAAGCTAATGGCAAGGCTATGTTTAAAGTTTCCATTGTAATAAAAATGTG-TTAAAGCAACCCATGGCACCATACGGGGAATGCCAGACGAAA-GTCATTCTGTCTGCCCTTCAGCCTCAGAAGTGGGATCTCTGCCACAC--TTCTGTGAAGATCATGCAGTTCAGAGCAGAGGCATCTTCAAAGTTGCTTTGCACATGA----TGGCATTGCAGGATTGCAAAGTGAGGGCACTGGCATTTCAAATACCGCAGGCACTGGTGCTGTGCAAGG-ATACTTAGTCCCAGCGTGCCTAAGAAAACTAAACCTTAATTTGTAGTCCCGGAAATCCCATCTCATGCGTGATGC--------------CATG-TTTCCAAAAGTAGAACATTTCTACTGCCTTATTTCCATGGCTTCCTTTTCTGGAG-------GCATTGAGCACTCACTCCTGATGTGTCCTTACTAAAACGTTAGTTAATGTAT-T---TGCTCATGGTT-GTTCAGCTGTCTGCATAACTTCTGTGTATTTATTTCAT i calJac3.chr3 C 0 C 0 s canFam3.chr16 41757057 718 + 59632846 ATGTTAAGACTGCTTTAGGTATTTTAGGCTATTTTTTT-----TTAAATAAGATTTAACACTGTTAATAATGTCCCAAAATAAGAAATAAGAAATAAGAAAGGCAATAAAAAAGCATATTACCCTATTTGTTTTGTTTTCGCTGTCATTTGAGAATGTGGACTGGTCAAGTATGCTTGCAAGAGAGTTGGTGTTATTTTGCATCTACCAACATAGGTGTGTT-----TTCCAATTTT-----GAATGTG-ATAAAGCAACCGATGAAACCCAACAGACAATGCCAGACCATAGGTAGTTCTTTCTGTCCCCCAACCCCAGAAGCTGGCTCTTTGAAACACTTCCCTAGGAAGATAATGCAATTCATAGTAGAGCTTTCTTTGGAACTGCTTTGAATATGATAATTGATAATAACAGGTTGCAAAGTGAGACCACAGGTATTTCAGATACTGTAGATAGTGATATCATGAAAGGAATATTTAATATAGACATGGATAAGGAAACTAAATCTTAATTGACAGCTTTGGAAATCTCATCTTATGTATGATGCTTTTTCCAAAAAAGCACGTTTTCCAAAATTGGAATATTTCTGCTGGCCAGTTTCCATGGTTTCCTCTTCTCAAACTATTTTCCAATGAATGTTCATTCC-AGTATATCCTTAATAAAAAGTTAGCTAATGCATGTATTTGTTCATGATGCATCCAGC--TCTGTAGAACTTCTGTGTATGTATTTATT i canFam3.chr16 C 0 I 24 e rhiRox1.KN298591v1 154468 3265 - 927060 I a score=718013.000000 s hg38.chrUn_KI270754v1 2945 345 + 40191 tatttaattta-tttttttgagatggattcttgctctgttgtccaggctgaagtgaattggcgcgatctcggctcactgcaacctccac-ctcctgggttcaaacgattctcatgtcagcctcccgagtagctgggattacaggcacacaccaccatgcccagctattttttgtatttttagtagagacagggtttcaccgtgttggccaggctggtcttgagctcctgacctcaagtgatctgcctgcctctgcctcccaatgtgctgggattacatgggtgagctgccactcctggccAACTTCTGTGTATTTATTGAGGGAGGTGATTTGGGTGGGGATGGTGG s panTro4.chr4_GL389869_random 30246 345 + 69473 tatttaattta-tttttttgtgatggattcttgctctgttgtccaggctgaagtgaagtggcgcaatctcggctcactgcaacctccac-ctcctgggttcaaacgattctcatgtcagcctcccaagtagctgggattacaggcacacaccaccatgcccagctaatttttgtatttttagtagagacagggtttcaccgtgttggccaggctggtcttgagctcctgaccccaagtgatttgcctgcctctgcctcccaatgtgctgggattacatgggtgagctgccacgcctggccAACTTCTGTGTATTTATTGAGGGAGGTGATTTGGGTGGGGATGGTGG i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19313098 345 + 23176937 tatttaattta-tttttttgagatggattcttgctctgttgcccaggctgaagtgaagtggcacgatctcggctcactgcaacctccac-ctcctgggttcaaacgattctcatctcagcctcccgagtagctgagattacaggcacacaccaccatgcccagctaatttttgtatttttagtggagacagggtttcaccatgttggccaggctggtcttgagttcctgacctcaagtgatctgtctgtctctgcctcccaatgtgctgggattacatgagtaagctgccacacctagccAACTTCTGTGTATTTATTGAGGGAGGTGATTTGGGTGGGGATGGTGG i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1382374 345 - 115148730 tatttaatttt-tttttttgagatggattcttgctctgttgcccaggctgaagtgaagtggagcgatctcggctagctgcaacctccac-ctcctgggttcaaatgattctcatctcagcctcccaagtagatgggattacaggcacacaccaccatgcccagctaatttttgtatttttagtagagacagagtttcaccatgttggccaggctggtcttgagctcctgacctcaagtgatctgcctgcctcggcctcccaatgttctgggattacatgggtaagctgccatgcctggccAACTTCTGTGTATTTATTGAGGGAGGTGATTTGAGTGGAGATGGTGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 485238 346 - 184069350 tatttaatttattttttttgagatagattcttgctctgttgtccaggctgaagtgaagtggcataatcttggctcactgcaacctccgc-ctcctgggttcaaatgattcttgtctcagcctcccgagtagctgggattacaggcacgcaccaccatgcccctctaacttttatatttttagtagagacaggggttcaccatgttggccaggctggtctcgagctcctgacctcaagtgatccacccgcctcggcctcccaaagtgctgggattacaggtgtgagccaccacacccggccAACTTCTGTGTATTTATTGAGGGAGGTGATTTGGGTAGGGGTGGTGT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 486335 346 - 189454096 tatttaatttattttttttgagatagattcttgctctgttgtccaggctgaagtgaagtggcataatcttggctcactgcaacctccgc-ctcctgggttcaaatgattcttgtctcagcctcccgagtagctgggattacaggcacgcaccaccatgccccactaacttttatatttttagtagagacagggtttcaccatgttggccaggctggtctcgagctcctgacctcaagtgatccacccgcctcggcctcccaaagtgctgggattacaggtgtgagccaccacacccggccAACTTCTGTGTATTTATTGAGGGAGGTGATTTGGGTAGGGGTGGTGT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 384576 347 - 178775436 tatttaatttattttttttgagatagattcttgctctgttgtccaggctgaagtgaagtggcatgatcttggctcactgcaacctccgctctcctgggttcaaatgattcttgtctcagcctcccgagtagctgggattacaggcacgcaccaccatgccccactaacttttatatttttagtagagacggggtttcaccatgttggccaggctggtctcgagctcctgacctcaagtgatccacccgcctcggcctcccaaagtgctgggattatatgtgggagccaccacacccggccaacttcTGTGTATTTATTGAGGGAGGTGATTTGGGTAGGGGTGGTGT i papAnu2.chr5 C 0 C 0 s calJac3.chr3 409487 294 + 190850796 TAATTAAttta-tttttt--agatggagttttgccctgtctcccagt----------gcagcacaatctcggctcactgcaaactccgc-ctcctgggttcaaaggattctcgtctcagcctgccgagtagccgggattac-------------------------ttttttgtatttttagtcaagatggggtttcaccacattggtcaggctggtcttgaactctggacct--------------gccttgacctcccaaagtgctgggattacaggcgtgagccaccacacctggtcAACTTCCGTGTATTGGCTGAGGCAGGTGATTGGAGCAGGGATGGTAG i calJac3.chr3 C 0 C 0 e rhiRox1.KN298591v1 154468 3265 - 927060 I e canFam3.chr16 41757775 24 + 59632846 I a score=290135.000000 s hg38.chrUn_KI270754v1 3290 129 + 40191 AAGGATTGGGGCATGTGAAAGAGAAGGAGTCCTGGTTTGTAAGTTAGATCATGTGAGGGATAGGGATAGGGAGTGGAGCACAGGGTGAATGAGACCACACACGTGT---AAGAGGGAATGATGAGCA-GGCAG s panTro4.chr4_GL389869_random 30591 129 + 69473 AAGGATTGGGGCATGTGAAAGAGAAGGAGTCCTGGTTTGTAAGTTAGATCATGTGAAGGATAGGGATAGGGAGTGGAGCACAGGGTGAATGAGACCACACATGTGT---AAGAGGGAATGATGAGCA-GGCAg i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19313443 129 + 23176937 AAGGATTGGGGCATGTGAAAGAGAAGGAGTCCTGGTTTGTAAATTGGAACATGTGAGGGAGAAGGATAGGGAGTGGAGCACAGGGTGAATGAGACCACACACGTAT---AAGAGGGAATGATGAGCA-GGCAG i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1382719 129 - 115148730 AAGGATTGGGGCATGTGCAAGAGAAGGAGTCCTGGTTTGTAAGTTAGATCATGTgagggagagggatagggagtggagcacagggtgaatgagaCCACACACGTGT---AAGACAGAATGATGAGCA-GGCAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 485584 124 - 184069350 AAGGATTAGGGCATGTGAAACAGAAGGTGTCCTGGTTTGTAA----GACCATGTGAGGGAGAGGGATGGGGAGTGGAGCCCAGGGTGAGTGAGACCA-ACATGTGT---AAGAGGGAATGATGAGCA-GGCAG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 486681 124 - 189454096 AAGGATTAGGGCATGTGAAACAGAAGGTGTCCTGGTTTGTAA----GACCATGTgagggagagggatagggagtggagcccagggtgagtgagaCCA-ACATGTGT---AAGAGGGAATGATGAGCA-GGCAG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 384923 124 - 178775436 AAGGATTAGGGCATGTGAAACAGAAGGTGTCCTGGTTTGTAA----GACCATGTGAGGGAGAGGGATAGGGAGTGGAGCCCAGGGTGAGTGAGACCA-ACATGTGT---AAGAGGGAATGATGAGCA-GGCAG i papAnu2.chr5 C 0 C 0 s calJac3.chr3 409781 124 + 190850796 AAGAATTGGGGCATGTGAAAGAGAAGAA------GTTTGTGAGTTAGACTATGTGTGAGAGAGGAATAGGGACTTGAGCACAGGATGAATGAGACCACACACGTGT---AAAGAGGGACGATGAGCAGGGCAG i calJac3.chr3 C 0 C 0 s canFam3.chr16 41757799 127 + 59632846 AGGGATTGGAGCATGGGAAAGATAACAAGTACTGGTTTGTTA----AAGAAGGAGAGGAAGAAGAACGGGGCATTGAG-ATAAGATGAATAAGAGGGCGCACGTGTTCCAAACAGAGACTGTGAACA-GAATA i canFam3.chr16 I 24 C 0 e rhiRox1.KN298591v1 154468 3265 - 927060 I a score=6705.000000 s hg38.chrUn_KI270754v1 3419 6 + 40191 -GAAGAG s panTro4.chr4_GL389869_random 30720 6 + 69473 -gaagag i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19313572 6 + 23176937 -GAAGAG i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1382848 6 - 115148730 -GAAGAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 485708 6 - 184069350 -GAGGAG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 486805 6 - 189454096 -GAGGAG i macFas5.chr5 C 0 I 174 s papAnu2.chr5 385047 2 - 178775436 -GA---- i papAnu2.chr5 C 0 C 0 s calJac3.chr3 409905 6 + 190850796 -GAAGAC i calJac3.chr3 C 0 C 0 s tarSyr2.KE929340v1 65911 6 - 319543 -GGAGCG i tarSyr2.KE929340v1 N 0 C 0 s canFam3.chr16 41757926 6 + 59632846 GGAGGA- i canFam3.chr16 C 0 C 0 e rhiRox1.KN298591v1 154468 3265 - 927060 I a score=10401.000000 s hg38.chrUn_KI270754v1 3425 5 + 40191 AGGGT s panTro4.chr4_GL389869_random 30726 5 + 69473 agggt i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19313578 5 + 23176937 AGGGC i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1382854 5 - 115148730 AGGGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 485714 5 - 184069350 AGGGG i rheMac3.chr5 C 0 I 298 s macFas5.chr5 486985 5 - 189454096 AGGGT i macFas5.chr5 I 174 C 0 s tarSyr2.KE929340v1 65917 5 - 319543 AGGGT i tarSyr2.KE929340v1 C 0 I 2 s canFam3.chr16 41757932 5 + 59632846 AAGGT i canFam3.chr16 C 0 C 0 e rhiRox1.KN298591v1 154468 3265 - 927060 I e calJac3.chr3 409911 0 + 190850796 C e papAnu2.chr5 385049 0 - 178775436 C a score=5348.000000 s hg38.chrUn_KI270754v1 3430 2 + 40191 TG s panTro4.chr4_GL389869_random 30731 2 + 69473 tg i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19313583 2 + 23176937 TG i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1382859 2 - 115148730 TG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 486017 2 - 184069350 tg i rheMac3.chr5 I 298 C 0 s macFas5.chr5 486990 2 - 189454096 TG i macFas5.chr5 C 0 C 0 s tarSyr2.KE929340v1 65924 2 - 319543 TG i tarSyr2.KE929340v1 I 2 C 0 s canFam3.chr16 41757937 2 + 59632846 TG i canFam3.chr16 C 0 I 1 e rhiRox1.KN298591v1 154468 3265 - 927060 I e calJac3.chr3 409911 0 + 190850796 C e papAnu2.chr5 385049 0 - 178775436 C a score=3390.000000 s hg38.chrUn_KI270754v1 3432 4 + 40191 GTGT s panTro4.chr4_GL389869_random 30733 4 + 69473 gtgt i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19313585 4 + 23176937 GTgt i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1382861 4 - 115148730 GTGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 486019 4 - 184069350 gtgt i rheMac3.chr5 C 0 C 0 s macFas5.chr5 486992 4 - 189454096 GTGT i macFas5.chr5 C 0 C 0 s tarSyr2.KE929340v1 65926 1 - 319543 G--- i tarSyr2.KE929340v1 C 0 C 0 e rhiRox1.KN298591v1 154468 3265 - 927060 I e canFam3.chr16 41757939 1 + 59632846 I e calJac3.chr3 409911 0 + 190850796 C e papAnu2.chr5 385049 0 - 178775436 C a score=44443.000000 s hg38.chrUn_KI270754v1 3436 22 + 40191 AGGAAAGGGTTGGTGCAGGAAA s panTro4.chr4_GL389869_random 30737 22 + 69473 aggaaagggttggtgcaggaaa i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19313589 22 + 23176937 aggaaaggattggggtaggaaa i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1382865 22 - 115148730 AGAAAAGGGTTGGTGTAGGAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 486023 22 - 184069350 aggaaagggttggtgtaggaaa i rheMac3.chr5 C 0 C 0 s macFas5.chr5 486996 22 - 189454096 AGGAAAGGGTTGGTGTAGGAAA i macFas5.chr5 C 0 C 0 s rhiRox1.KN298591v1 157733 22 - 927060 AGAAAGGGGTTGGTGTAGGAAA i rhiRox1.KN298591v1 I 3265 C 0 s tarSyr2.KE929340v1 65927 21 - 319543 -AGGGAGGGATGGTGGAGGGGA i tarSyr2.KE929340v1 C 0 C 0 e canFam3.chr16 41757939 1 + 59632846 I e calJac3.chr3 409911 0 + 190850796 C e papAnu2.chr5 385049 0 - 178775436 C a score=48358.000000 s hg38.chrUn_KI270754v1 3458 24 + 40191 GGGGTGGTGTAGGAAA-GGG-----------------TGGTA s panTro4.chr4_GL389869_random 30759 24 + 69473 ggggtggtgtaggaaa-ggg-----------------tggta i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19313611 24 + 23176937 ggggtggtgtaggaaa-ggg-----------------tggta i ponAbe2.chr4_random C 0 I 824 s nomLeu3.chr7b 1382887 41 - 115148730 GGGGTGGTGTAGGAAA-TGGGTGTTGTAGCAAAGTGTTGGTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 486045 24 - 184069350 -gggtggtggaggaaagggg-----------------tggta i rheMac3.chr5 C 0 C 0 s macFas5.chr5 487018 24 - 189454096 GGGGTGGTGTAGGAAA-GGG-----------------TGGTG i macFas5.chr5 C 0 C 0 s chlSab2.chr7 441786 24 - 135778131 GGGGTGGTGTAGGATG-GGG-----------------TCATG i chlSab2.chr7 N 0 C 0 s rhiRox1.KN298591v1 157755 24 - 927060 GGGGTGGTGTAGGAAA-GGG-----------------TGGTG i rhiRox1.KN298591v1 C 0 C 0 s tarSyr2.KE929340v1 65948 23 - 319543 GAGGCGATAGAGGGAG-GGA-----------------TGGT- i tarSyr2.KE929340v1 C 0 C 0 e canFam3.chr16 41757939 1 + 59632846 I e calJac3.chr3 409911 0 + 190850796 C e papAnu2.chr5 385049 0 - 178775436 C a score=8216.000000 s hg38.chrUn_KI270754v1 3482 3 + 40191 TAG s panTro4.chr4_GL389869_random 30783 3 + 69473 tag i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19314459 3 + 23176937 tag i ponAbe2.chr4_random I 824 C 0 s nomLeu3.chr7b 1382928 3 - 115148730 TAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 486069 3 - 184069350 tag i rheMac3.chr5 C 0 I 15 s macFas5.chr5 487042 3 - 189454096 TAG i macFas5.chr5 C 0 I 282 s chlSab2.chr7 441810 3 - 135778131 TAG i chlSab2.chr7 C 0 C 0 s rhiRox1.KN298591v1 157779 3 - 927060 TAG i rhiRox1.KN298591v1 C 0 C 0 s tarSyr2.KE929340v1 65971 1 - 319543 --G i tarSyr2.KE929340v1 C 0 C 0 e canFam3.chr16 41757939 1 + 59632846 I e calJac3.chr3 409911 0 + 190850796 C e papAnu2.chr5 385049 0 - 178775436 C a score=46850.000000 s hg38.chrUn_KI270754v1 3485 24 + 40191 GAAAGGGG---TGGTGTAGGAAA-GGG------------------T- s panTro4.chr4_GL389869_random 30786 24 + 69473 gaaagggg---tggtgtaggaaa-ggg------------------t- i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19314462 25 + 23176937 gaaagggg---tggtgtaggaaagggg------------------t- i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1382931 24 - 115148730 GAAATGGG---TGGTGTAGGGAA-GGG------------------T- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 486087 24 - 184069350 gaaagggt---tggtgtaggaaa-ggg------------------t- i rheMac3.chr5 I 15 C 0 s macFas5.chr5 487327 24 - 189454096 GAAAGGGG---TGGTGTAGGAAA-GGG------------------T- i macFas5.chr5 I 282 C 0 s papAnu2.chr5 385049 10 - 178775436 -----------------GGAGAG-GGG------------------T- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 441813 42 - 135778131 GAAAGGGG---TGGTGTAGGAAA-GGGGTGATGTAGAAAAGGGGTT- i chlSab2.chr7 C 0 C 0 s rhiRox1.KN298591v1 157782 23 - 927060 -GAAAGGG---TGGTGTAGGAAA-GGG------------------T- i rhiRox1.KN298591v1 C 0 N 0 s tarSyr2.KE929340v1 65972 28 - 319543 GAAAGGGGGCATGGTGGAAGGAA-GGG------------------AT i tarSyr2.KE929340v1 C 0 C 0 e canFam3.chr16 41757939 1 + 59632846 I e calJac3.chr3 409911 0 + 190850796 C a score=314478.000000 s hg38.chrUn_KI270754v1 3509 188 + 40191 GGTGTAGGAAAGGGGTGGTG--TAGGAAAGGGGTGGTGTAGGAAAGGG-----------------------------------TGGTGTAGGGAAGGGTTGGTGTAGGGAAGGGGTGGTGTAGGAAAGGG-GTGGT---GTAGGAAAGGGATGTTGTAGGAAA-GGGTGTTGCAGGAAAGTGTTGGTG--TAGGCAAGGGTTGGTGTAGGAAAGGTGTGGTGTAGGGAAGGG s panTro4.chr4_GL389869_random 30810 219 + 69473 ggtgtaggaaaggggtggtg--taggaaaggggtggtgtaggaaaggggtggtgtaggaaagag-gtggt-gtaggaaaggg-tggtgtagggaagggatggtgtagggaaggggtggtgtaggaaaggg-gtggt---gtaggAAAGGGATGTTGTAGGAAA-GGGTGT-GCAGGAAAGTGTTGGTG--TAGGCAAGGGTTGGTGTAGGAAAGGTGTGGTGTAGGGAAGGG i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19314487 189 + 23176937 ggtgtaggaaaggggtggtg--taggaaaggggtggtgtaggaaaggg-----------------------------------tgttgtaggaaagggttgttgtaggagagggttggtgtaggaaaggg-gtggg---gtaggaaagggttggtgtaggaaagggGTGGTGTAGGAAAGGGGTGGTG--TAGGAAAGGGGTCGTGTAGGAAAGGGGTGTTGTAGGAAAGGG i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1382955 228 - 115148730 GCTGTAGGAAAGGCTTGGTGAATAGGAAAGGCTTGGTGTAGGAAAGGG-TGGTGTAGGAATGGGTGTTGTAGTAGGAAAAGGTTGGTGTAGGAAAGGGGTGGTGCAGGAAAGCG-TAGTGTAGGAAAGTG-GTGGTGTAGTAGGAAAGGGTTGGTGTAGGAAAGGGGTGGTGTAGGAAAGGGTTGGTGAATAGCAAAGGGTTGGTGTAGGAAAGA-GTGGTGTAGGAAAGGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 486111 184 - 184069350 ggtggaggaaaggggtggta--taggaaa-gggtggtgtaggaaaggg---------------------t-------------tggtgtaggaaaggg-tggtggaggaaaggggtggtataggaaaggg--tggt---gtaggaaagggttggtgtaggaaa-gggtggtggaggaaagggttggtg--taggaaaggg-tggtgtaggaaaggggtggtgtaggatggg- i rheMac3.chr5 C 0 C 0 s macFas5.chr5 487351 186 - 189454096 GGTGTAGGAAAGGGGTGGTG--TAGGAAAGGGGTGGTATAGGAAAGGG-----------------------------------TGGTGTAGGAAAGGG-TGGTGTAGGAAAGGGTTGGTGTAGGAAAGGG-TTGGT---GTAGGAAAGGGGTGGTGTAGGGAA-GGGTGGTGTAGGAAAGGGTTGGTG--TAGGAAAGGGTTGGTGTAGGAAAGGGGTGGTGTAGGGAAGG- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 385059 167 - 178775436 GGTGTCCGACaggggtagtg--taggaaa-ggatggtgtaggaaaggg-----------------------------------tggtgtaggaaaggg-tggtgtaggaaagggttggtgtagggaaggg---------------------tggtgtagggaa-gggtggtgtaggaaaggggtggag--taggatgggg-tggtgtaggaaaggggtggtgtaggatggg- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 441855 169 - 135778131 GGTGTAGGAAAGGGTTGGTG--TAGGAAA-GGGTGGTGTAGGAAAGGG-----------------------------------TGGTGTAGAAAAGAG-TGGTGTAGGACAGGGGTGGTGTAGAAAAGGGGTTGGT---GTAGGAAAGGGTTGGTGTAGGAAA-GGGTGGTGTAGGAAAGGG-TGGTG--TAGGAAAGGG-TGGTGTAGGAAAGGG---------------- i chlSab2.chr7 C 0 I 62 s tarSyr2.KE929340v1 66000 179 - 319543 GATGGTGGGATGGGATGATG--AAGAGAAGGTATGGTTAGGAAGTGGA-----------------------------------TAACGGAGGGAAGGGCTGCAGGAGGGAAGGGGTCATGGAGGGTGAGG-GTATT---GGAGGGAAGGGATTCTGAAAGGACGGGATGCTGGA----------GCTG--GAGCGAAGGGGTGCTACAGGGAAAGGATACCGAAAAAATGGA i tarSyr2.KE929340v1 C 0 C 0 e canFam3.chr16 41757939 1 + 59632846 I e calJac3.chr3 409911 0 + 190850796 C a score=84636.000000 s hg38.chrUn_KI270754v1 3697 66 + 40191 GTGATATAGGAAAAGTTTGGTGTAGGAAAGGCTTGGTGTAGGAAAGGCTTGGTGTAGGAAAGATTT s panTro4.chr4_GL389869_random 31029 66 + 69473 GTGGTATAGGAAAAGTTTGGTGTAGGAAAGGCTTGGTGTAGGAAAGGCTTGGTTTAGGAAAGGTTT i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19314676 65 + 23176937 GTGTTGtaggaaagg-gtgttgtaggaaaggggtggtgtaggaaaggggtggtgtaggaaagggtt i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1383183 66 - 115148730 GTAGTGTAGGAAAGGTTTGGTGTAGGAAAGGGTTGCTGTAGGAAAGGGGTGGTATAGGAAAGGGCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 486295 59 - 184069350 gtggtgtaggaaagggttggtgtaggaaaggg-tggtgtaggaaagcggtggtgtaggat------ i rheMac3.chr5 C 0 C 0 s macFas5.chr5 487537 66 - 189454096 GTGGTGTAGGAAAGGGTTGGTGTAGGAAAGGGTTGGTGTAGGAAAGGGGTGGTGTAGGAAAGGGGT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 385226 60 - 178775436 gtggtgtaggaaaggggtggtatagaaaaggggtgatgtaggaaagggg-ggtgtaggaaa----- i papAnu2.chr5 C 0 C 0 s tarSyr2.KE929340v1 66179 62 - 319543 ATTTTGGAGGGAAGG--TAGCTTGATGAAGAGATGCTGTAagggagggatgg-gaaggaagggac- i tarSyr2.KE929340v1 C 0 C 0 e chlSab2.chr7 442024 62 - 135778131 I e canFam3.chr16 41757939 1 + 59632846 I e calJac3.chr3 409911 0 + 190850796 C a score=17700.000000 s hg38.chrUn_KI270754v1 3763 11 + 40191 GGTGTAGGAAA s panTro4.chr4_GL389869_random 31095 11 + 69473 GGTGTAGGAAA i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19314741 11 + 23176937 ggtgtagaaaa i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1383249 11 - 115148730 GGTGTAGGAAA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 487603 11 - 189454096 GGTATAGGAAA i macFas5.chr5 C 0 I 123 s chlSab2.chr7 442086 11 - 135778131 GGTGTAGGAAA i chlSab2.chr7 I 62 C 0 s tarSyr2.KE929340v1 66241 11 - 319543 ggcggagggaa i tarSyr2.KE929340v1 C 0 C 0 e canFam3.chr16 41757939 1 + 59632846 I e calJac3.chr3 409911 0 + 190850796 C e papAnu2.chr5 385286 0 - 178775436 C e rheMac3.chr5 486354 0 - 184069350 C a score=44802.000000 s hg38.chrUn_KI270754v1 3774 19 + 40191 GGGGTGTTGTAGGAAAGGG s panTro4.chr4_GL389869_random 31106 19 + 69473 GAGGTGTTGTAGGAAAGgg i panTro4.chr4_GL389869_random C 0 I 16 s ponAbe2.chr4_random 19314752 19 + 23176937 gaggtggtgtaggaaaggt i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1383260 19 - 115148730 GGGGTAGTGTAGGAAAGGG i nomLeu3.chr7b C 0 I 218 s rheMac3.chr5 486354 19 - 184069350 ggggtggtgtaggaaaggg i rheMac3.chr5 C 0 C 0 s macFas5.chr5 487737 19 - 189454096 GGGGTGGTGTAGGAAAGGG i macFas5.chr5 I 123 C 0 s papAnu2.chr5 385286 17 - 178775436 ggggtggtgtaggaaag-- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 442097 19 - 135778131 GGGGTGGTGTAGAAAAAGG i chlSab2.chr7 C 0 C 0 s tarSyr2.KE929340v1 66252 19 - 319543 ggagagctggagggaaggg i tarSyr2.KE929340v1 C 0 C 0 e canFam3.chr16 41757939 1 + 59632846 I e calJac3.chr3 409911 0 + 190850796 C a score=12942.000000 s hg38.chrUn_KI270754v1 3793 9 + 40191 TTGATGTAG s panTro4.chr4_GL389869_random 31141 9 + 69473 ttgatgtag i panTro4.chr4_GL389869_random I 16 C 0 s ponAbe2.chr4_random 19314771 9 + 23176937 ttggtgtag i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1383497 4 - 115148730 -----GTAG i nomLeu3.chr7b I 218 C 0 s rheMac3.chr5 486373 9 - 184069350 ttggtgtag i rheMac3.chr5 C 0 C 0 s macFas5.chr5 487756 9 - 189454096 GTGATGTAG i macFas5.chr5 C 0 C 0 s chlSab2.chr7 442116 9 - 135778131 GTGATGTAG i chlSab2.chr7 C 0 C 0 s tarSyr2.KE929340v1 66271 9 - 319543 atgctgaag i tarSyr2.KE929340v1 C 0 N 0 e canFam3.chr16 41757939 1 + 59632846 I e calJac3.chr3 409911 0 + 190850796 C e papAnu2.chr5 385303 0 - 178775436 C a score=6315.000000 s hg38.chrUn_KI270754v1 3802 10 + 40191 GAAAG----------------ATTTG s panTro4.chr4_GL389869_random 31150 10 + 69473 gaaag----------------atttg i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19314780 10 + 23176937 gaaag----------------aggtg i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1383501 10 - 115148730 GAAAG----------------GGTTG i nomLeu3.chr7b C 0 I 267 s rheMac3.chr5 486382 9 - 184069350 gaaa-----------------gggtg i rheMac3.chr5 C 0 C 0 s macFas5.chr5 487765 26 - 189454096 GAAAGGGGTGGTGTAAGAAAGGGGTG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 385303 5 - 178775436 ---------------------gggtg i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 442125 10 - 135778131 GAAAG----------------GGGTG i chlSab2.chr7 C 0 C 0 e canFam3.chr16 41757939 1 + 59632846 I e calJac3.chr3 409911 0 + 190850796 C a score=58507.000000 s hg38.chrUn_KI270754v1 3812 31 + 40191 GTGTACG-AAGGGGTTGGTGTAGGAAAGGGGT s panTro4.chr4_GL389869_random 31160 31 + 69473 gtgtacg-aaggggttggtgtaggaaaggggt i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19314790 31 + 23176937 gtgtagg-aaaggggtggtgtaggaaagggtt i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1383778 31 - 115148730 GTGTAGG-AAAGAAGTGGGGTAGGAAAGGGTT i nomLeu3.chr7b I 267 I 334 s rheMac3.chr5 486391 32 - 184069350 gtggaggaaaggggttggtgtacgaaagggtt i rheMac3.chr5 C 0 C 0 s macFas5.chr5 487791 32 - 189454096 GTGTAGGAAAGGGGTTGGTGTACGAAAGGGTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 385308 32 - 178775436 gtgtaggaaaggggttggtgtacgaaagggtT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 442135 32 - 135778131 GTGTAGAAAAGGGGTTGGTGTAGGAAAGGGTT i chlSab2.chr7 C 0 C 0 e canFam3.chr16 41757939 1 + 59632846 I e calJac3.chr3 409911 0 + 190850796 C a score=65111.000000 s hg38.chrUn_KI270754v1 3843 28 + 40191 TGTGTAGGAAAGTGTTGGTGTAGGAAAG s panTro4.chr4_GL389869_random 31191 28 + 69473 ggtgtaggaaagggttggtgtaggaaag i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19314821 28 + 23176937 ggtgtaggaaaggggtggtgtaggaaag i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1384143 28 - 115148730 GGTATAGGAAAGGGGTGGTATAGGAAAG i nomLeu3.chr7b I 334 C 0 s rheMac3.chr5 486423 28 - 184069350 ggtgtaggaaagagttggtgtaggaaag i rheMac3.chr5 C 0 C 0 s macFas5.chr5 487823 28 - 189454096 GGTGTAGGAAAGAGTTGGTGTAGGAAAG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 385340 28 - 178775436 GGTGTAGGAAAGAGTTGGTGTAGGAAAG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 442167 28 - 135778131 GGTGTAGGAAAGGGTTGGTGTGGGAAAG i chlSab2.chr7 C 0 C 0 e canFam3.chr16 41757939 1 + 59632846 I e calJac3.chr3 409911 0 + 190850796 C a score=40214.000000 s hg38.chrUn_KI270754v1 3871 18 + 40191 G--------------------------------GGTGGTGTAGGGTGCTG s panTro4.chr4_GL389869_random 31219 50 + 69473 gtttggtgtaggaaagggttggtgtaggaaaggggtggtgtagggtGCTG i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19314849 18 + 23176937 g--------------------------------gttggtgtagggAGCTG i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1384171 18 - 115148730 G--------------------------------GTTGATGTAGGGAGCTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 486451 18 - 184069350 g--------------------------------gttggtgtaaggtGCTG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 487851 18 - 189454096 G--------------------------------GTTGGTGTATGGTGCTG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 385368 18 - 178775436 G--------------------------------GTTGGTGTAAGGTGCTG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 442195 18 - 135778131 G--------------------------------GTTGGTGTAAGGTGCTG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 409911 18 + 190850796 G--------------------------------GGTGGTGTAGGGTGCTG i calJac3.chr3 C 0 C 0 e canFam3.chr16 41757939 1 + 59632846 I a score=1606462.000000 s hg38.chrUn_KI270754v1 3889 486 + 40191 ACATTTGCATAAATTGCACTGGGGTAGGAGTGGATGATGATGGAAAGTTGGAAGAATGTGATATTTTGGTGG-AAATAACAACTTAGAAACTGAGTCATCTTTTAG---------CTACAGAGAAG-------GGTATTCCCTTCACCATAT-AGTGAGCGGTTGCTGTATCCATGGCTCTTG-ACAAAGATGTTC----------ACTTTGTGCCTTTTCCTGCATTATTGGCATCTGGAGTTCTAACAGCCAAGAGAGACAGAGGTCATAGTGGAATCAATATTTCTATTACAGATAAGAAAATCCCAGAAGGAGGGCCTACATAGATTAACCTGTACACAACCAAACTAAGATTTAAGAATTTTTCTGAAGATAATCCTGGGATTATGTCTCACATTTCATTTTAAGCTTCTTTCTTCATTTCCCTTTGCTTTATA-TTTCTCTCTCCTATTTTATTCCTCCTTGAAATAAAATGGGACAATAATGTGTTTTAAATGTAGAATCAAGGAATAA s panTro4.chr4_GL389869_random 31269 493 + 69473 ACATTTGCATAAGTTGCACTGGGGTAGGAGTGGATGATGATGGAAAGTTGGAAGAATGTGATATTTTGGTGG-AAATAACAACTTAGAAATTGAGTCACCTTTTAG---------CTACAGAGAATACTATATGGTATTCCCTTCACCATAT-AGTGAGCAGTTGCTGTATCCATGGTTCTTG-ACAAAAATGTTC----------ACTTTGTGCCTTTTCCTGCATTATTGGCATCTGGAATTCTAACAGCCAAGAGAGACAGAGGTCATAGTGGAATCAATATTTCTATTACAGATAAGAAAATCCCAGAAGGAGGGCCTACATAGATTAACCTGTACACAACCAAACTAAGATTTAAGAATTTTTCTGAAGATAATCCTGGGATTATGTCTCACATTTCATTTTAAGCTTCTTTCTTCATTTCCCTTTGCTTTATA-TTTCTCTCTCCTATTTTATTCCTCCTTGAAATAAAATGGGACAATAATGTGTTTTAAATGTAGAATCAAGGAATAA i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19314867 487 + 23176937 ACATTTGCGTAAGTTGCACAGGGCTAGGAGTGGGTGATGATGGAAGGTTGGAAGAATGTGATATTTGGGTGG-AAATAACAACTTAGAAATTGAGTCATCTTTTAG---------CTACAGAGGAG-------GGTATTTCCTTCACCATGT-AGTGAGCGGTTGCTGTATCCATGGCTCTTG-ACAAAGATGTTC----------ACTTTGTGCCTTTTCCTGCATTATTGGCATCTGGAGTTCTAACAGCCAAGAGAGACAGAGGTCATAGTGGAATCAATATTTCTATTACAGATAAGAAAATCCCAGAAGGAGGGCCTACATAGATTAACCTGTACACAACCAAGCTAAGATTTAAGAATTTTTTTGAAGATAATCCTGGGATTATGTCTCACATTTAATTTGAAGCTTCTTCCTTTATTTCCTTTTGCTTTATATTTTCTTTCTCCTGTTTTATTCCTCCTTGAAATAAAACAGGACAATAACGTGTTTTCAACGTAGAATCAAGGAATAA i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1384189 488 - 115148730 ACATTTGCATAAGTTGCACAGAGCTAGGAGTGGGTGATGATGGAAGGTTGGAAGAATGTGATATTTGGATGA-AAATAACAACTTAGAAATTGAGTCATCTTTTAGCGAATTCCACCACATTGGAG---------------CTTCACCATAT-AGTGAGCAGTTGCTGTATCCATGGCTGTTG-ACAAAGATGTTC----------ACTTTGTGCCTTTTCCTGCATTATTGGCATCTGGAGTTCTAACAGCCAAGAGAGACAGAGGTCATAGTGGAATCAATATTTCTATTACAGATAAGAAAATCCCAGAAGGAGGGCCTACATAGATTAATCTGTACACAACGAAACTAAGATTTAAGAATTTTTTTGAAGATAATCCTGGGATTATGTCTCACATTTAATTTGAAGCTTCTTTCTTTATTTCCCTTTGCTTCATATTTTCTCTCTCCTATTTTATTCCTCCTTGAAATAAAATGGGACAATAATGTGTTTTAAATGTAGAATCAAGGAATAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 486469 486 - 184069350 ACATTTGCATAAGTTGCACAGGGGTAGGAGAGGGTGATGATGGAAAGTTGGAAGAATGTGATAGTTGGGTGG-AAATAACAACTTAGAAATTGAGTCATCTTTTTG---------CTACAGAGGAG-------GGCATTCCCTTCACTGTAC-AGTGAGAGGCTGCTGTATCCATGACTCTTG-ACAAAGATGTTC----------ACTTTTTGCCTTTTCCTGCATTATTGGCATCTGGAGTTCTAACAGCCAAGAGAGACAGAGGTCATAGTGGAATCAATATTTCTATTATAGATAAGAAAATCCCAGAAGGAGGGCCTACATAGATTAATCTGTACACAACCAAACTAAGATTTAAGAATATTT-TGAAGATAATCCTGGGATTATGTATCACATTTAATTTTAAGCTTCTTTCTTTATTCCCCTTTGCTTTATATTTTCTCTCTCCTATTTTATTCCTCCTTGAAATAAAATTGGAAAATAATGTGTTTTAAATGTACAATCAAGGAATAA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 487869 476 - 189454096 ACATTTGCATAAGTTGCACAGGGGTAGGAGAGGGTGATGATGGAAGGTTGGAAGAATGTGATATTTGGGTGG-AAATAACAACTTAGAAATTGAGTCATCTTTTTG---------CTACAGAGGAG-------GGCATTCCCTTCACTGTAC-AGTGAGAGGCTGCTGTATCCATGACTCTTG-ACAAAGATGTTC----------ACTTTTTGCCTTTTCCTGCATTATTGGCATCTGGAGTTCTAACAGCCAAGAGAGACAGAGGTCATAGTGGAATCAATATTTCTATTATAGATAAGAAAATCCCAGAAGGAGGGCCTACATAGATTAATCTGTACACAACCAAACTAAGATTTAAGAATGTTT-TGAAGATAATCCTGGGATTATGTATCACATTTAAT----------TTTCTTTATTCCCCTTTGCTTTATATTTTCTCTCTTCTATTTTATTCCTCCTTGAAATAAAATTGGAAAATAATGTGTTTTAAATGTACAATCAAGGAATAA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 385386 486 - 178775436 ACATTTGCATAAGTTGCACAGGGGTAGGAGAGGGTGATGATGGAAGGTTGGAAGAATGTGATATTTGGGTGG-AAATAACAACTTAGAAATTGAGTCATCTTTTTG---------CTACAGAGGAG-------GGCATTCCCTTCACTGTAC-AGTGAGAGGCTGCTGTATCCATGACTCTTG-ACAAAGATGTTC----------ACTTTTTGCCTTTTCCTGCATTATTGGCATCTGGAGTTCTAACAGCCAAGAGAGACAGAGGTCATAGTGGAATCAATATTTCTATTATAGATAAGAAAATCTCAGAAGGAGGGCCTACATAGATTAATCTGTACACAACCAAACTAAGATTTAAGAATGTTT-TTAAGATAATCCTGGGATTATGtatcacatttaattttaaacttctttctttattcccctttgctttatattttctctctcctgttttaTTCCTCcttgaaataaaattggaaaataatgtgttttaaatgTGGAATCAAGGAATAA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 442213 486 - 135778131 ACATTTGCATAAGTTGCACAGGGGTAGGTGTGGGTGATGATGGAAGGTTGGAAGAATGTGATATTTGGGTGG-AAATAACAACTTAGAAATTGAGTCATCTTTTAG---------CTACAGAGGAG-------GGCATTCCCTTCACTGTAC-AGTGAGAGGCTGCTGTATCCATGACTCTTG-ACAAAGATGTTC----------ACTTTTTGCCTTTTCCTGCATTATTGGCATCTGGAGTTCTAACAGCCAAGAGAGACAGAGGTCGTAGTGGAATCAATATTTCTATTATAGATGAGAAAATCCCAGAAGGAGGGCCTACCTAGATTAATCTGTACACAACCAAACTAAGATTTAAGAATGTTT-TGAAGATAATCCTGGGATTATGTATCGCATTTAATTTTAAGCTTCTTTCTTTATTCCCCTTTGCTTTATATTTTCTCTCTCCTATTTTATTCCTCCTTGAAATAAAATTGGAAAATAATGTGTTTTAAATGTAGAACCAAGGAATAA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 409929 477 + 190850796 ACATTTACCTA--------CGGGGTA-GAGTGGGTGATGATAGAAGGTTGGAAGAATGTGATATCTGGGTTG-AAATAACAACATAGAAATTAAGTCGCTTTTTAG---------CCACAGAGGAG-------GGTATTCCCTTCGTCATAT-AGTAAGAGCTTGCAGCGTACACGGATCTTG-ACTAAAATGTTC----------ACTTTGTGCCTTTTTCTGCATTATTAGCACCTAGATTTCTAAAAGCCAGGAGACACAGAGGTCATAGTGGAATCGAGATTTCTGTGACAGAGAAGAAAATCCCAGAAGGAGGGCCTACACAGATTGATCTGTGTGCAACCAAACTAAGATTTAAGAATTTTT-TGAAGATAATCCTGGGATTATGTCTCACATTTCATTTTAAGTTTCTTTCTTTATTCCCCTTTGCTTTATATTTTCTCTCTCCTATTTTATTTCTCTTTGAAATTAAATTGGACAATAATGTGTTTAAAATTTAGAATCAAGGAATAA i calJac3.chr3 C 0 C 0 s canFam3.chr16 41757940 487 + 59632846 ACGTTTGCATAATTTGCACAGAAATAGG-GAGAGTGATAATGGAAGGTGGGAAGAATGTGATATTTGGGTGGAAAATAAGAATTCAGAAATCGACTCATCCTGTAG---------CTACATTTGAG-------CATACTCCCTCTGCCGCATCAGTGAGAAGTTACTGGATACTTGGTTCTTGAACAAACCTGTTCATATGGTGTGATTTTCCGAATTTTCCTG-ATGGTTGATCTCTAGAGTTCTAA-----AAGAGAGACAGAGGTCACAGTAGAATCAATATTTCTATCATAGATAAGAAGATCTCAGAAGAAGGACCTACATAGATGAATCTGTATACAACCACACTTTGGCCTAAGAATTTT--TGAAGGAAATACTGGGATCATGTCTCAAATTGAATTTTAAGC----TTCTTTATTTCATTTGGATTTATATTTTCTCTCTTCTATTTTATCCCTTCTTGAAATAAAATTGGACAATAGTATGTTAAAAGTGTAAAATAAAAAAAAAA i canFam3.chr16 I 1 I 173 a score=2137175.000000 s hg38.chrUn_KI270754v1 4375 693 + 40191 CAAGAAATCATCATT----------------------------------TCAACTGCTATCATGTCCAGTGAAATTAAATGCTTGGATAATTACTTTGTTAATTACTAACAA-------------CTCCAAAATTCTGATTCTCAATCCACA----GTCTATTG---------AATCATATAAATGGCTTGCTTTTATTGAATGGAAAAAGACAAAGAAGAAAAAGAGTGTCCAGTAGAGAGGAGGAGAAAGCACTACAGGGAACACTAGGGTCCCCATGA-TAAGTTCACTTT-ATTCCACTCCATAGTTCCTGTTAATTA----GGAGCTTCCA----------ATCATTGCAGCAACATGGGTTCCTACACTTCAATCCAACCCC---------TCCTCTTCTACTATCCCTAACTTTGA-CTAGTATGAGAT--GAAGACTTGAGCTCAGCAACTTCCCATGGCTTTCGAATCTCAGGAGTTGTTCTTACTCTT-TTTGATATAACAACCCTCAATTAATGTTTGGTA-TTCTTATGCAACCAGTGGGAAAACAAGTAT-------GCATCTGGAAAGCTTAGAAAATATAGAGATAGTCATATACCTAGGCTTGTTTTTA-TTTTAATTGAGTAATTTGCAAAGGTATCTTCTATATTAATAAATGCACATTCAATTCAAACAGATTGATATTGAATTAATA-GGAAGTAATAAATTGGTTTATTTATGCTAGTGGAATTAAAAAATCTTGCTACTCTATACATTCAATTTCTAGTCCCTACTTTGA s panTro4.chr4_GL389869_random 31762 693 + 69473 CAAGAAATCATCATT----------------------------------TCAACTGCTATCATGTCCAGTGAAATTAAATGCTTGGACAATTACTTTGTTAATTACTAACAA-------------CTCCAAAATTCTGATTCTCAATCCACA----GTCTATTG---------AATCATATAAATGGCTTGCTTTTATTGAATGGAAAAAGACAAAGAAGAAAAAGAGTGTCCAGTAGAGAGGAGGAGAAAGCACTACAGGGAACACCAGGGTCCCCATGA-TAAGTTCACTTT-ATTCCACTCCATACTTCCTGTTAATTA----GGAGCTTCCA----------ATCATTGCAGCAACATGGGTTCCTACACTTTAACCCAACCCC---------TCCTCTTCTGCTATCCCTAACTTTGA-CTAGTATGAGAT--GAATACTTGAGCTCAGCAACTTCCCATGGCTTTCGAATCTCAGGAGTTGTTCTTACTCTT-TTTGATGTAACAACCCTCAATTAATGTTTGGTA-TTCTTACGCAACCAGTGGGAAAACAAGTAT-------GCATCTGGAAAGCTTAGAAAAAATAGAGATAGTCATATACCTAGGCTTGTTTTTA-TTTTAATTGAGTAATTTGCAAAGGTATCTTCTATATTAATAAATGTACATTCAATTCAAACAGATTGATATTGAATTAATA-GGAAGTAATAAATTGGTTTATTTATGCTAGGGGAATTAAAAAATCTTGCTACTCTATACATTCAATTTCTAGTCCCTACTTTGA i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19315354 695 + 23176937 CAGGAAATCATCATT----------------------------------TCAACTGCTATCATTTCCAGTGAAATTAAATGCTTGGATGATTACTTTGTTAATTACTAACAA-------------CTCCAAAATTCTGATTCTCAATCCACA----GTCTATTG---------AATCATATAAATGGCTTGCTTTTATTGAATGGAAAAAGACAAAGAAGAAAAACAGTGTCCAGTAGAGAGGAGGAGAAAGCACTGCAGGGAACACCAGGGTCCCCATTATTAAGTACACTTT-ATTCCACTCCATACTTCCTGTTAATTA----GGAGTGTACA----------ATCATTGCAGTAACATGGGGTCCTACACTTTAACCCAACCCC---------TCCTTTTCTACTATCCCTAACTTTGA-CTAGTATTCGAT--GAATACCTGAGCTCAGCAACTTCCCATGGCTTTCAGATCTCAGGAGTTGTTCTTACTCTT-TTTGACATAACAACCCTCAATTAATGTTTGGTA-TTCTTACATAACCAGTGGGAAAACAAGTAT-------GCATCTGGAAAGCTTAGAAAATATAGAAATAGTCCTATACCTAGGCTTGTTTTTATTTTTAATTGAATAATTTGCAAAGGTATCTTCTATATTAATAAATGTACATTCAATTCAAACAGATTGATATTGAATTAATA-GGAAGTAATGAATTGGTTTATTTATGCTAGTGGAATTAAAAAATCTTGCTACTCTATACATTCAATTTCTAGTCCCTAGTTTGA i ponAbe2.chr4_random C 0 I 56397 s nomLeu3.chr7b 1384677 693 - 115148730 CAAGAAATCATCATT----------------------------------TCAACTGCTATCATTTCCAGTGAAATTAAATGCTTGGATGGTTACTTTGTTAATTACTAACAA-------------CTCTAAAATTCTGATTCTCAATCCACA----GTCTATTG---------AATCATATAAATGGCTTGCTTTTATCGAATGGAAAAAGACAAAGAAGGAAAACAGTGTCCAGTAGAGAGGAGGAGAAAGCATTGCAGGGAACACCAGGGTCCCCATGA-TAAGTTCACTTT-ATTCCACTCCATACTTCCTGTTAATTA----GGAGCATCCA----------ATCATTGCAGTGACATGGGGTCCTACACTTTAACCCAACCCC---------TCCTCTTCTACTAACCCTAACTTTGA-CTAGTATGTGAC--GAATACCTGAGCTCAGCAACCTCCCATGGCTTGCAGATCTTGGGAGTTGTTCTTACTCTT-TTTGGTATAACAACCCTCAATTAATGTTTGGTA-TTCTTACACGACCGGTGGGAAAACAAGTAT-------GCTTCTGGAAAGCTTAGAAAATATAGACAGAGTTATATACCAAGGCTTGTTTTTA-TTTTAATTGAATAATTTGCAAAGGTATCTTCCATATTAATAAATGTACATTCAATTCAAACAGATTGATATTGAATTAATA-GGAAGTAATAAATTGGTTTATTTATCCTAGTGGAATTAAAAAATCTGGCTACTCTATACATTCAATTTCTAGTACCTAGTTTGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 486955 701 - 184069350 CAAGAAATCATCATT----------------------------------TCAACTGCTATCATTCACAGTGAAATTAAATGCTTGGATGATTACTTTGTTGATTACTAACAA-------------CTCCAAAATTCTGATTCTCAATCCACA----GTCTATTGAATCATATTAATCATATCAATGGCTTGCTTTTATTTAATGGAAAAAGACAAAGAAGAAAAAGAGTGTCCAGTAGAGAGGAGGAGAAAGTACCACAGAAAACACCAGGATCCTCACGA-TAAGTTCACTTT-ATTCCACTCCATACTTCCTGTTAATTA----GGAGCTTCCA----------ATCATTGCAGTAACATAAAGTCCTACACTTTAACCCAACCCT---------TCCTCTTGTACTATCCTTAACTTTGA-CTAGTATGAGGT--GAATACTTGAGCTCAGTGACTTCCCATGGCGTTCACACCTTGGGAGTTGTTCTTACTC-------ATATAACAACCCTCAATTAATGTTTGGTA-TTCTTACACAACCAGTGGGAAAACAAGTGTGTGATACGCATCTGGAAAGCTTAGAAAAGATAGAG--AGACATATACCTAGGCTTGTTTTTA-TTTTAATTGAATACTTTGCAAAGGTATCTTCTATATTTAAAAATGTAACTCCAATTCAAACAGATTGATATTGAATTAACA-GGAAGTAATAAATTGGTTTATTTATCCTAGTGGAATTAAAAAATCTTGCTAATCTATACATTCAATTTCTAGTCCTTAGTTTGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 488345 701 - 189454096 CAAGAAATCATCATT----------------------------------TCAACTGCTATCATTCACAGTGAAATTAAATGCTTGGATGATTACTTTGTTGATTACTAACAA-------------CTCCAAAATTCTAATTCTCAATCCACA----GTCTATTGAATCATATTAATCATATCAATGGCTTGCTTTTATTTAATGGAAAAAGACAAAGAAGAAAAAGAGTGTCCAGTAGAGAGGAGGAGAAAGTACCACAGAAAACACCAGGATCCTCACGA-TAAGTTCACTTT-ATTCCACTCCATACTTCCTGTTAATTA----GGAGCTTCCA----------ATCATTGCAGTAACATAAAGTCCTACACTTTAACCCAACCCT---------TCCTCTTGTACTATCCTTAACTTTGA-CTAGTATGAGGT--GAATACTTGAGCTCAGTGACTTTCCATGGCGTTCACACCTTGGGAGTTGTTCTTACTC-------ATATAACAACCCTCAATTAATGTTTGGTA-TTCTTACACAACCAGTGGGAAAACAAGTGTGTGATACGCATCTGGAAAGCTTAGAAAAGATAGAG--AGACATATACCTAGGCTTGTTTTTA-TTTTAATTGAATACTTTGCAAAGGTATCTTCTATATTTAAAAATGTAAATCCAATTCAAACAGATTGATATTGAATTAACA-GGAAGTAATAAATTGGTTTATTTATCCTAGTGGAATTAAAAAATCTTGCTAATCTATACATTCAATTTCTAGTCCTTAGTTTGA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 385872 701 - 178775436 CAAGAAATCATCATT----------------------------------TCAACTGCTATCATTCACAGTGAAATTAAATGCTTGGATGATTACCTTGTTGATTACTAACAA-------------CTCCAAAATTCTGATTCTCAATCCACA----GTCTATTGAATCATATTAATCATATCAATGGCTTGcttttatttaatggaaaaagacaaagaagaaaaagagtgtCCAGtagagaggaggagaaagtaCCACAGAAAACACCAGGATCCTCACGA-TAAGTTCGCTTT-ATTCCACTCCATACTTCCTGTTAATTA----GGAGCTTCCA----------ATCATTGCAGTGACATAAGGTCCTACACTTTAACCCAACCCT---------TCCTCTTGTACTATCCTTAACTTTGA-CTAGTATGAGGT--GAATACTTGAGCTCAGTGACTTCCCATGGCGTTCACACCTTGGGAGTTGTTCTTACTC-------ATATAACAACCCTCAATTAATGTTTGGTA-TTCTTACACAACCAGTGGGAAAACAAGTGTGTGATACGCATCTGGAGAGCCTAGAAAAGATAGAG--AGACATATACCtaggcttgttttta-ttttaattgaatactTTGCAAAGGTatcttctatatttaaaaatgtaaatccaaTTCAAACAGATTGATATTGAATTAACA-GGAAGTAATAAATTGGTTTATTTATCCTAGTGGAATTAAAAAATCTTGCTAATCTATACATTCAATTTCTAGTCCTTAGTTTGA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 442699 709 - 135778131 CAAGAAAACATCATT----------------------------------TCAACTGCTATAATTCATAGTGAAAGTAAATGCTTGGATGATTACTTTGTTGATTACTAACAA-------------CTCCAAAATTCTGATTTTCAATCCACA----GTCTATTGAATCATATTAATCATATCAATGGCTTGCTTTTATTTAATGAAAAGAGACAAAGAAGAAAAAGAGTGTCCAGTAGAGAGGAGGAGAAAGTACTACAGGGAACACCGGGGTCCTCATGA-TAAGTTCGCTTT-ATTCCACTCCATACTTCCTGTTAATTA----GGGGCTTCCA----------ATCATTGCAGTAACATGGGGTCCTACACTTTAACCCAACCCT---------TCCTCTTGTACTATCCCTAACTTTGA-CTAGTATGAGGT--GAATTCTTGAGCTCAGCGACTTCCCATGGCTTTCACACCTTGGGAGTTGTTCTTACTCTT-TTTGATATAACAACCCTCAATTAATGTTTGGTA-TTCTTACACAACCAGTGGGAAAACAAGTATGTGGTACGCATCTGGAAAGCTTAGAAAAGATAGAGATAGACATATACCTAGGCTTGATTTTA-TTTTAATTGAATACTTTGCAAAGGTATCTTCTATATTTAAAAATGTAAATCCAATTCAAACAGATTGATATTGAATTAACA-GGAAGTAATAAATTGGTTTATTTATCCTAGTGGAATTAAAAAATCTTGCTAATCTATACATTCAATTTCTAGTCCCTAGTTTGA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 410406 693 + 190850796 CAAGAAATCATCATT----------------------------------TCAACAGCTGTCATTTACAGTGAAATGAAATGCTTGGACGATTACTTTGTTAATTGCTAACAA-------------TGCCCAAATTCCGATTCTCAATCCACA----GTCTATTT-------TGAATTATATAAACAGCTTGCGTTTATTCAACGGAAACAGACAAAGAAGAAAAAGAGTGTCTACTAGACAGGACAGGAAAGCACGACAGGGAACACCAGGGTCCCCGTGA-TAAGGTCACTTTCGTTCCCCTCCACGCCGTCTGTTAATTA----GTAGCTTCCA----------GCGATGGCAGTAACATGGCGTCCTGCACTTTAACCCCGCCCA---------G-CTCTTCTGCTACCCCTAACCTTGA-CTAGTATGAGAT--GAATACTTGAGCTTAGCAACTTCCTATGGCCTTCAGATCTTGGGAGTTGTCCTTATTCTT-TCTGATGTAACAACCCTCAGTCAATGTTTGGTA-TTCTTACACAACCAGAGGGAAAACAAGTAC-------GTATCTGGAAAGCTTAGAAAAGTTAGAGATAGACATATACCTGGGCTTGTTTTTA-TTTTAACTGAATAATTTGTAAAGGTAGCTTCTATATTAATAAATGTACATCCGATTCAAACAGATTGATACTGAATTCCTA-GGAAGTAATACGTTGG-TTATTTAAACTAGTAGAATTAAAAACTCTTGCTACTCTATACATTCCATTTCCCATCC-TGGTTTGA i calJac3.chr3 C 0 I 7 s canFam3.chr16 41758600 753 + 59632846 aaataaataatctttaaaaaaaaGGGTAAAATCAAGGACTATTAAGAAATCAACTACTGTCATTTAGAGTGAAGTTATATAAGTGAATGATTACTTTGTTAATTATTGGTAAAACTGTTTTAGAGCCCCCAAATTCTGATTATCCACCCATACACTGTCTGTTG---------AATCCTGTAAATGGCTTGTTTTTATCAAGTGGGTGGA---AGACAGGAAAAAGAACATTAGGCAGAGA-----AGAAAGAAATGAAGGGAA---TAGACTCATTGCAA-TAAAATCACTTA-ATTCCACTCCATGTGCCCCCCGAATTATTAGGGGACTACTAATATACTGATATGACTGTGATAACATGGTATCCTGCATTTTAATCTAACCCTAATTATACACATTCTTCTATTATCACAATCTTTAACCTAGTACAAGATAGAAACACTAGAGCTCAGCAACTTTCTGTGGTTTTTAAATCTTGTGAGTTGTCCTTATTCTGATTTAATATAACAA-CCTTAATTTATCTTCAGTAGTTCTTAGTTAACCAGTGGAAAAACAGGCAT-------TCATCTGGAGAGCTTAGGAAAGATATAAGTGGAGGTATGCCTACCCCTTTT-----TTTTAATTGAA-AAACTGAAAAAGTATC--CTAAACTAATAAAATTACATTCAATTTATACTGATAGATATTAGTGTAACACAAAAGTAATAGATTGATTGATTTATCCTAGTGATATTTAATAAACTTGCTACACTATTCTTTCAATTTCCAGTCC-TAGTTTGA i canFam3.chr16 I 173 I 8 a score=2075468.000000 s hg38.chrUn_KI270754v1 5068 613 + 40191 AAAGAGCATTTTCTTCCTTTTGAAATATATTTGAGCATAGTAACTTTCAAGGTCCTAAGTTTATTGGCATAATTTAATGGAAAAATGTATGCTCTAAAGCATTCA--TTTTTTTCCCCAAGCTTTGTGGTTTTCAATTTCTCATCTACTGGATGGCTTTTAGTTTACATGGCAGAACAGAATCTTCTCAACTTTTTGATTCCCCTGATAAAATATTCAATAGAGAATTAAGCCAAAATTTGCTTCACCCAAGGACATGATCTCATCCTTATTCTTGTCTTCATGCCTATTGAAATACAGCTATTCTTATATGTATTTAGCTAAGTGATAGGCTTAAGCATCAGTTATCTTTTTTGG------------------CTAATTTGTTTCAAAAGTAATTGAGCCCATGTACACATGAAATAATATGTAAAACAGTAAAGATCCCTGTACACAACAGTATTGAAGCCACTGTAATATTTCAAGACTAAATTAGACACTCTCTTCCTAGC-CCCCTTTCACTCCTCCACCCTCCACCACATAGGACACTTTCTGGAAAAGAAGTCCAGGCAAAGAGACGTTAGTTTAATTGTTGCTAACGTCATATAAAAATG-ATCACCAACTTGGAATTTCTGAATTC s panTro4.chr4_GL389869_random 32455 613 + 69473 AAAGAGCATTTTCTTCCTTTTGAAATATATTTGAGCATAGTAACTTTCAAGGTCCTAAGTTTATTGGCATAATTTAATGGAAAAATTTATGCTCTAAAGCATTCA--TTTTTTTCCCCAAGCTTTGTGGGTTTCAATTTCTCATCTACTGGGTGGCTTTTAGTTTACATGGCAGAACAGAATCTTCTCAACTTTTTGATTCCCCTGATAAAATATTCAGTAGAGAACTAAGCCAAAATTTGCTTCACCCAAGGACATGATCTCATCCTTATTCTTGTCTTCATGCCTATTGAAATACAGCTATTCTTATATGTATTTAGCTAAGTGATAGGCTTAAGCATCAGTTATCTTTTTTGG------------------CTAATTTGTTTCAAAAGTAATTGAGCCCATGTACACATGAAATAATATGTAAAACAGTAAAGATCCCTGTACACAACAGTACTGAAGCCACTGTAATATTTCAAGACTAAATTAGACACTCTCTTCCTAGC-CCCCTTTCACTCCTCCACCCTCCACCACATAGGACACTTTCTGGAAAAGAAGTCCAGGCAAAGAGACGTTAGTTTAATTGTTGCTAACGTCACATAAAAATG-ATCACCAACTTGGAATTTCTGAATTC i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19372446 613 + 23176937 GAAGAGCATTTTCTTCCTTTTGAAATATATTTGAGCATAGTAACTTTCAAGGTCCTAAGTTTATTGGCATAATTTAATGGAAAAATTTATGCTCCAAAGCATTCA--TTTTTTTCCCCAAGCTTTGTGGTTTTCAATTTCTCATCTACTGGGTGGCTTTTAGTTTACATGGCAGAACAGAATCTTCTCAACTTTTTGATTCCCCTAATAAAATATTCAATAGAGAACTAAGCCAAAGTTTGCTTCAACCAAGGATATGATCTCATCCTTATTCTTGTCTTTATGCTTATTGAAATACAGCTATTCTTATATGTATTTATCTAAGTGGTAGGTTTAAGCATCAGTTGTCTTTTTTGG------------------CTAATTTGTTTCAGAAATGATTGAGCCCATGTAAACATAAAATAATATTTAAAACAGTAAAGATCCCTGTACACAACAGTATTGAAGCCACCGTAGTACCTCAAGACTAAATTAGACACTCTCTTCCTAGC-CCCCTTTCACTCCTCCACCCTCCACCACATAGGACACTTTCTGGAAAAGAAGTCCAGGCAAAGAGACGTTAGTTTAATTGTTGTTAACGTCACATAAAAATG-ATCACCAACTTGGAATTTCTGAATTC i ponAbe2.chr4_random I 56397 C 0 s nomLeu3.chr7b 1385370 612 - 115148730 AAAGAGCATTTTCTTCCTTTTGAAATATATTTGAGCATAGTAACTTTCAAGGTCCTAAGTTTGTTGGCATAATTTAATGGAAAAATTTATGCTCCAAAGCATTCA--TTTTTTTCCCCAAGCCTTGTGGTTTTCAATTTCTCATCTACTGGGTGGCTTTTAGTTTACATGATAGAACAGAATCTTCTCAACTTTTTGATTCCCCTAATAAAATATTCAATAGAGAACTAAGCCAAAGTTTGCTTCCACCAAGGATATGATCTCATCGTTATTCCTGTCTTCATGCCTGTTGAAATCCAGCTATTCTTGTATGTATTTAGCTAAGTGATAGGCTTAAGCATCAATTGTCTTTTTTGG------------------CTAATTTGTTTCAAAAGGGATTGAGCCCATGTACACATGAAATAATATTTAAAACAGTAAAGATCCCTGTACACAACAGTATTGATGTCACTGTAACATCTCAAGACTAAATTAGACACTCTCTTCCTAGC-CCCCTTTCACTCCTTCACCCTCCACCACA-GGGACACTTTCTGGAAAAGAAGTCCAGGCAAAGAGACGTTAGTTTCATTGTTGCTAACGTCACGTAAAAATG-ATCACCAACTTGGAATTTCTGAATTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 487656 615 - 184069350 AAAGAGCATTTTCTTCCTTTTGAAATATATTTGAGCATAGTAACTTTCAAGGTCCTAGGTTTATTGGCATAATTTAATGGAAAAATTTATGCTCCAAAGCATTCA-TTTTTTTCCCCCAAGCTTTGTGGTTTTCAATTTCTCATCTACTGGTTGGCTTTTAGTTTACATGGCAGAACAGAATCTTCTCAACTTTTTGATTCCTGTAATAAAATATTCAATGGAGAACTAAGCCAAAGTTTGCTTCAACCAAGGGTATGATCTCATCCTTATTCTTGTTTTTATGCTTATTGAAATACAGCTATTCCTATATGTATTTAGCTAAGCGATAGGCTTAAGCATCAGTTGTCTTCTTTGG------------------CTAATTTGTTTCGAAAGTGATTAAGCCCATGTTCACATAAAATAATATTTAAAACAGTAAAGCTCCGTGTGCACAACAGTACTGATACCACTGTAATATCTCAAGACTAAATTATATACGCTTCTCCTAGC-CCCCTTTCACTCCTTCACCCTTCACCACATAGGACACTTTCTGGAAAAGAAGTCCAGGCAAAGAGACATTAGTTTAATTCTTGCTAACGTCACATAAAAATACATCACCAACTTGGAATTTCTGAATTC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 489046 616 - 189454096 AAACAGCATTTTCTTCCTTTTGAAATATATTTGAGCATAGTAACTTTCAAGGTCCTAGGTTTATTGGCATAATTTAATGGAAAAATTTATGCTCCAAAGCATTCATTTTTTTTCCCCCAAGCTTTGTGGTTTTCAATTTCTCATCTACTGGTTGGCTTTTAGTTTACATGGCAGAACAGAATCTTCTCAACTTTTTGATTCCTGTAATAAAATATTCAATGGAGAACTAAGCCAAAGTTTGCTTCAACCAAGGGTATGAtctcatccttattcttgtttttatgcttattGAAATACAGCTATTCCTATATGTATTTAGCTAAGCGATAGGCTTAAGCATCAGTTGTCTTCTTTGG------------------CTAATTTGTTTCGAAAGTGATTAAGCCCATGTTCACATAAAATAATATTTAAAACAGTAAAGCTCCGTGTGCACAACAGTACTGATACCACTGTAATATCTCAAGACTAAATTATATACGCTCCTCCTAGC-CCCCTTTCACTCCTTCACCCTTCACCACATAGGACACTTTCTGGAAAAGAAGTCCAGGCAAAGAGACATTAGTTTAATTCTTGCTAACGTCACATAAAAATACATCACCAACTTGGAATTTCTGAATTC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 386573 616 - 178775436 AAAGAgcactttcttccttttgaaatatatttgagCATAGTAACTTTCAAGGTCCTAGGTTTATTGGCATAATTTAATGGAAAAATTTATGCTCCaaagcattcatttttttccccccaagctTTGTGGTTTTCAATTTCTCATCTACTGGTTGGCTTTTAGTTTACATGGCAGAACAGAATCTTCTCAACTTTTTGATTCctgtaataaaatattcaatggaGAACTAAGCCAAAGTTTGCTTCAACCAAGGGTATGATCTCATCCTTATTCTTGTTTTTATGCTTATTGAAATACAGCTATTCCTATATGTATTTAGCTAAGCGATAGGCTTAAGCATCAGTTGTCTTctttgg------------------ctaatttgttttgaaaGTGATTAAGCCCATGttcacataaaataatatttaaaacagtaaaGCTCCGTGTGCACAACAGTACTGATACCACTGTAATATCTCAAGACTAAATTATATACTCTCCTCCTAGC-CCCCTTTCACTCCTTCACCCTTCACCACATAGGACACTTTCTGGAAAAGAAGTCAAGGCAAAGAGACATTAGTTTAATTCTTGCTAACGTCACATAAAAATACATCACCAACTTGGAATTTCTGAATTC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 443408 606 - 135778131 AAAGAGCATTTTCTTCCTTTTGAAATATATTTGAGCATAGTAACTTTCAAGGTCCTAGGTTTATTGGCATAATTTAATGGAAAAATTTATGCTCCAAAGCATTCA-TTTCTTCCCCCCAAGCTTTGTGGTTTTCAATTTCTCATCTACTGGGTGGCTCTAAGTTTACATGGCAGAACAGAATCTTCTCAACTTTTTGATTCCTGTAATAAAATATTCAATGGAGAACTAAGCCAAGGTTTGCTTCAACCAAGGGTATGATCTCATCCTTATTCTTGTCTTTATGCTTATTGAAATACAGCTATTCCTATATGTATTTAGCTAAGTGATAGGCTTAAGCATCAGTTGTCTTTTTTGG------------------CTAATTTGTTTCAAAAGTGATTAAGCCCATATTTACATAAAATAATATTTAAAACAGTAAAGCTCTGTGTGCACAGCAGTATTGATACCACTGTAATATCTCAAGACTAAATTATACACTCTCCTCCTAGC-CCCCTTTCACTCCTTCACCC---------TAGGACACTTTCTGGAAAAGAAGTCCAGGCAAAGAGACGTTAGTTTAATTCTTGCTAACGTCACATAAAAATACATCACCAACTTGGAATTTCTGAATTC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 411106 607 + 190850796 AGAGAGCATTTTCTTCCTTTTGAAATGTATTTGAGCGTAGTAACTTTCAAGGTCCTAAGTTTATTGGCATAATTTAATGG-AAAATTTATGCTCCAAAGCATTCA--TTTTTTTCCCTAAGCTTCGTGGATTTCAATTTCTCATCTGCTGTGTGACTTCTAGTTTACATGGCAGAACAGAATCTTCTCAACTTTTTAATTCCCCGAATAAAATATTCAATGGAAAACTATTCCAAAATTTGATCCAACCAAGGGTATGACCTCATCCTTATTCTTGTCTTGATGCTTATTAAAATACAG---TTTTTAAATGTGCAT---TAAGTGATAAGCTTAAGCATTGGTTGTCTTTTTTGG------------------CTAATTATTTTCAAACGTGATTAAGCCCACATACCCATAAAATAGTATTTAAAACAATGAAGTTTCCTGTTCACAACAGTATTGATGCCACTGTAATATCTCAAGACTAAATTATATATTCTCTTCCCAGC-CCCCTTCCACTCCTCCACCCCCCACCACATAGGACACTTTCTGGAAAAGAAGTCCAGGCAAAGAGATGTTAGTTCAATTGATGCTAACTTCACATAAAAACAGATCACCAACTTGGAGTTTCTGAATTC i calJac3.chr3 I 7 I 589 s canFam3.chr16 41759361 588 + 59632846 AAAGAGCATATCCTTCCTTTTT---TATATTTGATGAGAGTAACTTTCAAGGTCCTAAGTTTATTGGCATAATTTAATGGAAAAATTTATGCTCCAAAGCATTCA--TTTTTCTTCCCAAGCTTTGTGGTTTTCAATTTCTCAACTAGTTGGTGGCTTT-AGTTTACACAGCAGAACAGAATCTTCTCAACTTTTTGATTCCCTTAATAAAATATTCAATGGAGAATTATACCAAAGTTTAAGTAAACCAAGGATATGATCTCATCCTTATTCTTGTCCTTGGGGTTGTTGAAACACAGTTATTATTATATGTATTTATCTAAGTTGTAAGTTTAAGCATAAGTTTTCTTTTTTGGTGTGTGTGTGTGTGTTTACTAATCTAGTTCAAATGTGATTGAGGCCAAATACAGATGAAATCATAGTTAATACAGTAAAGTTTCCTGTACATGATGGCACTAATATCATTGAAGTATCTTAAGACTGAATAACACATACTTTTTCCCTCTCCTCTCTAACTTCTACA----------------ATACTATCTGGAAAAGAATTCCAGGAAACGAGACATTGATTCAAT-------------------------GTCAATAATCTTACATTTCTGAATTG i canFam3.chr16 I 8 C 0 a score=458227.000000 s hg38.chrUn_KI270754v1 5681 154 + 40191 ACATGAAAGGGTGATACTGAGTTTAAACGTAAAGTTTCATATCCCATTGGTGTCAAAATTG-GTGGATAGAAAGAGTACAGGATTGTAAAGCAATTTCAGAGCAAGCTTCTAATGGCAACTTTAGTCCACAGTTTGGATCCTGTGCCCACCTGAC s panTro4.chr4_GL389869_random 33068 142 + 69473 ACATGAAAGGGTGATACTGAGTTTAAACGTAAAGTTTCATATCCC------------ATTG-GTGGATAGAAAGAGTACAGGATTGTAAAGCAATTTCAGAGCAAGCTTCTAATGGCAACTTTAGTCCACAGTTTGGATCCTGTGCCCACCTGAC i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19373059 154 + 23176937 ACATGAAAGGGTGATACTGAGTTTAAACATAAAGTTTCATATTCCATTGGTGTCAAAATTG-GTGGATAGAAAGAGTACAGGATTGTAAAGCAATTTCAGAGCAAGCTTCTAATGGCAACTTCAGGCCACAGTTTGGATCCCGTGCCCACCTGAC i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1385982 154 - 115148730 ACATGAAAGGGTGATACTGAGTTTAAACGTAAAGTTTCATATTCTATTGGTGTCAAAATTG-GTGGATAGAAAGAGTACAGGATTGTAAAGCAATTTCAGAGCAAGCTTCTAATGGCAACTTTAGGCCACAGTTTGGATCCTGTGCCCACCTTAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 488271 153 - 184069350 ACATGAAAGGATGATACTGAGTTTACATGTGAAGTTTCATATTCCACTGGTGTCAAAATTG-GTGGATAG-AAGAGTGTAGGTTTGTAAAGCAATTTCAAGGCAAGCTTCTAATGGTAACTTTAGCCCACAGTTTGGATCCTGTGCCCACCTGAC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 489662 153 - 189454096 ACATGAAAGGATGATACTGAGTTTACATGTGAAGTTTCATATTCCACTGGTGTCAAAATTG-GTGGATAG-AAGAGTGTAGGTTTGTAAAGCAATTTCAAGGCAAGCTTCTAATGGTAACTTTAGCCCACAGTTTGGATCCTGTGCCCACCTGAC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 387189 153 - 178775436 ACATGAAAGGATGATACTGAGTTTGCATGTGAAGTTTCATATTCCACTGGTGTCAAAATTG-GTGGATAG-AAGAGTGTAGGTTTGTAAAGCAATTTCAAGGCAAGCTTCTAATGGTAACTTTAGCCCACAGTTTGGATCCTGTGCCCACCTGAC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 444014 154 - 135778131 ACATGAAAGGATGATACTGAGTTTACATGTGAAGTTTCATATTCCACTGGTGTCAAAATCG-GTGGATAGAAAGAGTATAGGTTTGTAAAGCAATTTCAAGGCAAGCTTTTAATGGCAACTTTAGCTCATAGTTTGGATCCTGTGCCCACCTGAC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 412302 154 + 190850796 ACCTGAAAGGATGATACTGACTTTAACAACAACGCTTCATATTCCATTGGTGTCAAAATCG-GTGGCTAGAAAGAGTATAGGATTGTAAAGCAATATCAGCGCAAACTTCCAATGGCAACTTGAGGCCACGGTTTGGACCCTGTGCCCGCCTGAC i calJac3.chr3 I 589 C 0 s canFam3.chr16 41759949 133 + 59632846 ACTTCAAAGTATGTTAATAGATTTAAATGCAAAATTCTATATTCCAGTGTGGTGAAAACTGCTTGGATAG-AAGAGTATAAGTTTGTAAGGGAATCTCAGAACCTTCGTCCAGTAGTTTCTCTGAGCCTCAGTT--------------------- i canFam3.chr16 C 0 C 0 a score=464021.000000 s hg38.chrUn_KI270754v1 5835 257 + 40191 ATCTAttc-------------------------tttttttgagttggagtcttgctctctctcccagtcttgagtgcagtggcgagatctgggctcactgcaagctccgcctcctgggttcacgccattctcctgcctcagcctccctagtagctgggactacaggcgcccaccaccaag-ccagctaattttttgtatttttagtagagacggggtttcacggtgttagccaggatggtctcgatctcatgacctcgtgatccacctgcctcggcctctgaa s panTro4.chr4_GL389869_random 33210 257 + 69473 ATCTAttc-------------------------tttttttgagttggagtcttgctctctctcccagtcttgagtgcagtggcgagatctgggctcactgcaagctccgcctcctgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccaag-gcagctaattttttgtatttttagtagagacggtgttttacggtgttagccaggatggtctcgatctcatgacctcgtgatccacctgcctcggcctctgaa i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19373213 275 + 23176937 ATCTAttctttt--------ttttttttttttttttttttgagatggagtctcgctctgtcacccaggctggagtgcagtggcgtgatctcggctcactgcaagctctgccttccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggtgcccgccaccacgcccggctaattttttgtatttttagtagagacggggtttcactgtgttagccaggatggtctcgatctcctgagctcgtgatccacccgcctcagcctctgaa i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1386136 258 - 115148730 ATCTAttc-------------------------ttttttcgagatggagtttcgctctctctcccaggctggagtgcagtggcgcgatctcaactcactccaagctccgccgcccgggttcacgccattctcctgcctcagcctcctgagcagctgggactacaggcgcccgccaccatgcccagctaattttttatatttgtagtagagacggggtttcacagtgttagccagaatggtctcgatctcctgacctcgtgatccatccacctcggcctcTGAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 488424 269 - 184069350 ATCTATTC------------Tttttgttttgttttgttttgagacggagtctggctctgtggcccaggctggagtg-actggcacaatctctgctcacggcaagctccacctcccgggttcacgccattctcctgcctcagcctccggagtagctgggactacaggtgcgcaccaacacgctcggctaattttttgcacttttagtagggatggggtttcatcgtgttagccaggatggtctccagctcctgacttcgtgatccacc-gcctgggcctcTGAC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 489815 280 - 189454096 ATCTATTCTttttgtttt-ttttttgttttgttttgttttgagacggagtctggctctgtggcccaggctggagtg-actggcacaatctctgctcacggcaagctccacctcccgggttcacgccattctcctgcctcagcctccggagtagctgggactacaggtgcgcaccaacacgctcggctaattttttgcacttttagtagggatggggtttcatcgtgttagccaggatggtctccagctcctgacttcgtgatccacc-gcctgggcctcTGAC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 387342 277 - 178775436 atctattctttttgtt----tttttgttttgttttgttttgagacggagtctggctctgtggcccagggtggagtg-actggcacaatctctgctcactgcaagctccacctcctgggttcacgccattctcctgcctcagcctccggagtagctgggactacaggtgcgcgccaccacgctcggctaattttttgcacttttagtagggatggggtttcatcgtgttagccaggatggtctccatctcctgacttcgtgatccacc-gcCTGGGCCTCTGAC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 444168 281 - 135778131 ATCTACTCTTtttgttttgttttttgttttttgtttttttgagatggagtctggctccgttgtccaggctggagtg-agtggcacaatctctgctcacttcaagctctgcctcccgggttcatgccattctcctgcctcagcctccagagtagctgggactacaggtgcctgccgccatacccggctaatttttttcacttttggtagagatggggtttcactgtgttagccaggatggtctccatctcccgatcacgtgatccgcc-gcctggccctcTGAC i chlSab2.chr7 C 0 C 0 s canFam3.chr16 41760082 62 + 59632846 ----------------------------------TTCTTTG----TGGGTATTGCccccc-------------------------------------------gccccccccccca-------------cccccgccccagcc------------------------------------------cTGAT----------------------------------------CCAGAATG--------------------------------------------- i canFam3.chr16 C 0 C 0 e calJac3.chr3 412456 0 + 190850796 C a score=1706116.000000 s hg38.chrUn_KI270754v1 6092 553 + 40191 aTCTATTCTTAGCTGTAGGTGGGGACCAGGACCAGAATCTTCAGAGCAGGCCCTAGAAAGCTGGGAAGTCAGGGGATTCCACTACAGGTT--TCTCTATTCTGTCGGCATTTTAAGTGGTTCTGTTTAGATCTAGGCACATTAGAGCTACCCCTCAAACAGACGACGACTCTTAAGAGCCCCGGAATTTCTTTATTACCCAGGGAGTCACTGGGGACTGGCAGTAGGTGCCAGGTTTGGCGATGGCGTTTTGTGAATCACTGAGCTCATCTCAGGGCAGAGCAGCTTCCTAATGTGACTGTCATC-TCCTCTTCCTTTCCCTCCAACACCAGCCACACTTCACCACACTGGCCAGGTGTTTACCAACCTACCCCTTCGTACAAAGTTCAACCTGACATTGTTTGGTAGTCAATGATATAAAGCTTGTTGTCTAAGTCAGCATCTGCAGTTTTACCGACTGATAGAAAGGTACAAGATAGAATATGATTCGGGACAGGAG--TCATCAACGTGTTGCCTTTCTGTTGCAT-GGAATGA-ACGTTTTGAAGTTGGAAGTGTC s panTro4.chr4_GL389869_random 33467 553 + 69473 aTCTATTCTTAGCTGTAGGTGGGGACCAGGACCAGAATCTTCAGAGCAGGCCCTAGAAAGCTGGGAAGTCAGGGGATTCCACTACAGGTT--TCTCTATTCTGTCGGCATTTTAAGTGGTTCTGTTTAGATCTAGGCACATTAGAGCTACCCCTCAAACAGACGACGACTCTTAAGAGCCCCGGAATTTCTTTATTACCCAGGGAGTCACTGGGGACTGGCAGTAGGTGCCAGGTTTGGCGATGGCGTTTTGTGAATCACTGAGCTCATCTCAGGGCACAGCAGCTTCCTAATGTGACTGTCATC-TCCTCTTCCTTTCCCTCCAACACCAGCCACACTTCACCGCACTGGCCAGGTGTTTACCAACCTACCCCTTCATACAAAGTTCAACCTGACATTGTTTGGTAGTCAATGATATGAAGCTTGTTGTCTAAGTCAGCATCTGCAGTTTTACCGACTGATAGAAAGGTACAAGATAGAATATGATTCGGGACAGGAG--TCATCAACGTGTTGCCTTTCTGTTGCAT-GGAATGA-ACGTTTTGAAGTTGGAAGTATC i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19373488 556 + 23176937 aTCTATTCTTAGCC-TAGGTGGGGACCAGGACCGGAATCTTCAGGGCAGGCCCTAGAAAGCTAGGAAGTCACGGGACACCACTACAGGTTTCTCTCTATTCTGTCGGCATTCTAAGTGGTTCTCTTTATGTCTAGGTGCATTAGAGCTACCCCTCAAACAGGTGATGACTCTTAAGAGCCCTGGAATTTCTTTATTACCCAGGGAGTCGCTGGGGACTGGCAGTAGGTGCCAGGTTTGGTGATGGCGTTTTGTGAATCATTGAGCTCATCTCAGGGCAGAGCAGCTTCCTAATGTGACTGTCATC-TCCTCTTCCTTTCCCTCCAACACCAGCCACACTTCACCGCACTGGCCAGGTGTTTCCCAACATACCCCTTCCTACAAGG-TCAACCTGACATTGTCTGGTAGTCAATGATGTAAAGCTTGTTGTCTAAGTCAGCATCTGCAATTTTACAGACTGATAAAAAGGTACAAGATAGAATATGATTCGGGACAGGAGTCTCATCAACGTGTTGCTTTTCTGTTGCAT-GGAATGGTATGTTTTGAAGTTGGAAGTGTC i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1386394 551 - 115148730 ATCTATTCTTAGCC-TAGGTAGGGACCAGGACCGGAATCTTCAGAGCAGGCCCTAGAAAGCTGGGAAGTCAGGGGATGCCACTACAGGTTTCTCTCTATTCTGTCGGCATTCTAAGTGGTTCTGTTTAGATCTAGGTGCATTAGAGCTACCCCTCAAACAGACGATGACTCTTAAGAGCCCTGGAATTTCTTTATTACCCAGGGAGTCACTGGGGACTGGCAGTAGGTACCAGGTTTGGTGATGGCGTTTTGTGAATCACTGAGCTCATCTCAGGGCAGAGCAGCTTCCTGATGTGATTGTCATC-TCCTCTTCCTTTCCCTCCAACACCAGCCACACTTCACCGCACTGGCCAGGTGTTTCCCA------CCCTTCGTACAAAGATCAACCTGACGTTGTTTGGTAGTCAATGATGTAAAGCTTGTTGTGTAAGTCAGCATCTGCAATTTTTCAGACTGATAGAAAGGTAAAAGATAGAATATGATTCGGGACAGGAGTCTCATTAACGTGTTGCCGTTCTGTTGCAT-GGAATGATATGTTTTGAAGCTGGAACTGTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 488693 538 - 184069350 ATCTATTCTTAGCTGTAGGTGGGGAC--------------------CAGGCCCTAGAAAGCTGGCAAGTCAGGGGACACCACTGCAGGTTTCTGTCTATTCTGCTGGCATTCTAAGTGGTTCTGTTTAGACCTAGGTGCATTAGAACTACCCCTCAAACAGATGATGACTCTTAAGAGCCCTGGAATTTCTTTATTACCCAGGGAGTCACTGGGGACTGGCTGTAGGTGCCAGATTTGGTGATGGCATTTTGTGAATCACTGAGCTCATTTCGGGGCAGAGCAGCTTCCTGATGTGACTGTCATC-TCCTCTTCCTTTCCCTCCAACACCAACCACACTTCTCCGTGCTGGCCAGGTGTTTCCCAACCGACCCCTTCGTACAAAGATCAACCTGACATTGTTTGGTAGTCAGTGATATAAAGCTTGTTGTCTAAATCAGCATCTGCGATTTTACCGACTGATAGAAAGGTACAGGATAGAATATGATTTGGGACAGGAGTCTCATCAATGTGTTGCCTCTCTGTTGCAT-GGAATGATATGTTTTGAAGTTGGAAGTGTC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 490095 537 - 189454096 ATCTATTCTTAGCTGT-GGTGGGGAC--------------------CAGGCCCTAGAAAGCTGGCAAGTCAGGGGACACCACTGCAGGTTTCTGTCTATTCTGCTGGCATTCTAAGTGGTTCTGTTTAGACCTAGGTGCATTAGAACTACCCCTCAAACAGATGATGACTCTTAAGAGCCCTGGAATTTCTTTATTACCCAGGGAGTCACTGGGGACTGGCTGTAGGTGCCAGATTTGGTGATGGCATTTTGTGAATCACTGAGCTCATTTCGGGGCAGAGCAGCTTCCTGATGTGACTGTCATC-TCCTCTTCCTTTCCCTCCAACACCAACCACACTTCTCCATGCTGGCCAGGTGTTTCCCAACCGACCCCTTCGTACAAAGATCAACCTGACATTGTTTGGTAGTCAGTGATATAAAGCTTGTTGTCTAAATCAGCATCTGCGATTTTACCGACTGATAGAAAGGTACAGGATAGAATATGATTTGGGACAGGAGTCTCATCAATGTGTTGCCTCTCTGTTGCAT-GGAATGATATGTTTTGAAGTTGGAAGTGTC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 387619 538 - 178775436 ATCTATTTTTAGCTGTAGGTGGGGAC--------------------CAGGCCCTAGAAAGCTGGGAAGTCAGGGGACACCACTGCAGGTTTCTGTCTATTCTGCTGGCATTCTAAGTGGTTCTGTTTGGACCTAGGTGCATTAGAACTACCCCTCAAACAGATGATGACTCTTAAGAGCCGTGGAATTTCTTTATTACCCAGGGAGTCACTGGGGACTGGCTGTAGGTGCCAGATTTGGTGATGGCATTTTGTGAATCACTGAGCTCATTTCGGGGCAGAGCAGCTTCCTAATGTGACTGTcatc-tcctcttcctttccctccaaCACCAACCACACTTCTCCACGCTGGCCAGGTGTTTCCCAACCGACCCCTTCGTACAAAGATCAACCTGACATTGTTTGGTAGTCAGTGACATAAAGCTTGTTGTCTAAATCAGCATCTGCGATTTTACCGACTGATAGAAAGGTACAGGATAGAATATGATTTGGGACAGGAGTCTCATCAATGTATTGCCTCTCTGTTGCAT-GGAATGATATGTTTTGAAGTTGGAAGTGTC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 444449 537 - 135778131 ATCCGTTCTTAGCTGTAGGTGGGGAT--------------------CAGGCCTTAGAAAGCTGGGAAGTCAGGGGACACCACTGCAGGTTTCTCTCTATTCTGCCGGCATTCTAAGTGGTTCTGTTTAGACTTAGGGGCATTAGAGCTACCCCTCAAACAGATGATGACTCTTAAGAGCCCTGGAATTTCTTTATTACCCAGGGAGTCACTGGGGACTGGCTATAGGTGCCAGGTTTGGTGATGGCATTTTGTGAATCACTGAGCTCATTTCGGGGCAGAGCAGCTTCCTAATGTGACTGTCGTC-TCCTCTTCCTTTCCCTCCAACACCAACCACACTTCACCGCACTGGCCAGGTGTTTCCCAACCGACCCCTTCATAC-AAGGTCAACCTGACATTGTTTGGTAGTCAGTGATATGAAGGTTGTTGTCTAAATCAGCATCTGCGATTTTACCGACTGATAGAAAGGTACAGGGTAGAATATGATTTGGGACAGGAGTCTCATCAATGTGTTGCCTCTCTGTCGCAT-GGAATGAGATGTTTTGAAGTTGGAAGTGTC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 412456 552 + 190850796 ATCTATTCTTAGCCGTAGGT-GGGACCAGGACTAGAATCTTCAGAACAGGCCCTAGAGAACTGGGAAGTCAGGG--TCACATGACAGGTTCCTCTCCATTCTGTGAGCATTCTAAGCTGTCCTGTTTAGATCTAGCTGCGTTAGAGCTACCCCTCCAGCAGATGACGACTCTTAAGAGCCCCGGAATTTCTTTATTACTCA-GGAGTCACTGGGGACTGGCAGTAGGTGCCAGGTTTGGTGATGGCAGTTTGTGAATCACTGAGCTCA-CTCAGCCTGGAGCAGCTTCCTGATGTGACTGGCATC-CCCTCCTCCTTTCCCTCCCACACCAGTCACACTTCACGGCACTGG-CAGGGGTTTCCCAACCCACCCCTTAGTACAAGGATCTGCCTGGTGTTGTTTTGTAGTCAGTGATATAAAGGTTGTTGTCTAAGTCAACATCTACCGTTTTACAGACTGATAGAAAGCTACAGGATAGAATATGATTGGGGACAGATGTCCGATCCATATGTCGCCTCACTGTTGCGT-GGAATGACATGTTTTGAAGCTGGAAGTCTC i calJac3.chr3 C 0 C 0 s canFam3.chr16 41760144 530 + 59632846 -CCTGTTCTTAGTTCTAGCT-GATAC-------AGCAACTCCTTAGTACCCCTGAAAAATCTGGGAAGTCCTAGGTCACCACTGTAAGTTTCTTTCTCTTTTGTGGACAATTTAAGCTGAACTGTTGAGATCTAGGTACATTAGAGCTACTGCTGTAGCAGTTGATGACTTTTAAGAACCCTAGAACGTCCTTATTACTTAGGTAATCACTGGGGAA-GACAAGAACTCCCCA----------------CTGTGAGTCTCTAAGCTTATCTCAGTCCAGAGTAGCTCCCTTATGAGAATTCCATCATCCTCTTTCTTTGCCTTTAACACCAA----ACTTCATGGCACGGACCAAGTGTTCTCTAACTTACCACTTAGTGTAAAAATTAGCCTGAAATTATTTTGTAGTCAATGACACAAAGGTTTTTATGTAAGTTAATATTTACAACTTTACAGATTGATAAGGAAATGCAAGATAGAATATGATTTTAGGTAAGAGTCTGGTTGATGTGCTGCATCTCTGTTGCATAAGCATAATATGCTTTTAAGCTATAAGTACC i canFam3.chr16 C 0 C 0 a score=282827.000000 s hg38.chrUn_KI270754v1 6645 118 + 40191 CTGAAATTTCAG------------------------------GACTTCGTCTTAAAGATGAAAAA-------------AAGATGAGGTGTCATGCACAGCTATTTTGTGGCAGCATTTGAATTCAACCCCAAGTCAAGTTATGATATCTCCTGTGTCAGAG s panTro4.chr4_GL389869_random 34020 118 + 69473 CTGAAATTTCAG------------------------------GActtcatcttaaagatgaaaaa-------------aagatgaggtgtcatgcacagctattttgtggcagcatttgaattcaaccccaagtcAAGTTATGATATCTCCTGTGTCAGAG i panTro4.chr4_GL389869_random C 0 C 0 s nomLeu3.chr7b 1386945 118 - 115148730 CTGAAATTTCAG------------------------------GActtcatcttaaagatgaaaaa-------------aagatgaagtgtcatacacagctattttgtggcagaattggaattcaaccccaagtcAAGTTATGATATCTCCTGTGTCAGAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 489231 118 - 184069350 CTGAAATTTCAG------------------------------AActtcatcttaaagatgagaaa-------------aagattaggtgtcatgcacagctattttgtggcagaatcagaattcaacccccagtcAAGTTATGGTATCTTCTGTGTCAGAG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 490632 118 - 189454096 CTGAAATTTCAG------------------------------GACTTCATCTTAAAGATGAGAAA-------------AAGATTAGGTGTCATGCACAGCTATTTTGTGGCAGAATCAGAATTCAACCCCCAGTCAAGTTATGGTATCTTCTGTGTCAGAG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 388157 118 - 178775436 CTGAAATTTCAG------------------------------GACTTCatcttaaagatgagaaa-------------aagatTAGGTGTCATGCACAGCTATTTTGTGGCAGAATCAGAATTCAACCCCCAGTCAAGTTATGGTATCTTCTGTGTCAGAG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 444986 118 - 135778131 CTGAGATTTCAG------------------------------GACTTCATCTTAAAGATGAGAAA-------------AGGATTAGGTGTCACGCACAGCTGTTTTGTGGCAGAATCAGAATTCAACCCCAAGTGAAGTTATGACACCTTCTGTGTCAGAG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 413008 117 + 190850796 CTGAAATTTCAG------------------------------AACTTCATCTTAAAGATGA-AAA-------------AAGACTAGGTGTCGTGCACAGCTATTTTGTAGAAGAATCAGAATTTAACCCCAAGTCAAGTTGTGGCATCTCCTTTGTCCGAG i calJac3.chr3 C 0 C 0 s canFam3.chr16 41760674 147 + 59632846 TTTAAATTTAAGACTTTGTCttttttttttttttttttttAAGACTTTGtcttaaagatgagaaagttgacacctaggaggattaggtggctcacacagctatc-----acaga----tgactcaacccaaagtca-----tcAGATGTCCTATGGCAGAT i canFam3.chr16 C 0 I 3490 e ponAbe2.chr4_random 19374044 0 + 23176937 C a score=1267284.000000 s hg38.chrUn_KI270754v1 6763 540 + 40191 GAAAGTACTTTTGATAATCCTAGAAATATCAAGACTCCAGTGGCAGTGAATATTTGATTTCCACTTTGAAATGTAGATCACATTAGCAGGATATTCCCTAAAGGAGCTTTATA-CACAGTTGGTCCTCCCTCTGTCAACCTCATCTCCGACTCAAGTGGATCGAGTTCAAAACAGCCACACTTGTTCCAGAAGCCAA--TTTTGTTTGGGCCATAATATAGA-GATGGTCCCATCCAGCCTTTAAGCATGCTAAGCACAGGTAGC--TGTTTGTTACAATAGTTGAAAGGAGAAAGCCATAAAAACA------------------AAGTCTCCCACTATTTCATCCAATTTAAAATTGCGGAAGGTGACAGAAAATATAACTGAAAGCTTTCCCTAACCTCTCTTTAAAGAAGTCCTAG----AAAAAAAAAAGAAAGCATTTA-------------TTTCCTTGATGATTTCTAAGTAATAACTAAATATGGATGCAATTTTGAACCGTGTATGGATGTTCCCAGTATAA---TGTTCCTCTTTTGGAG--ACATCGCATCATATTTATTTATCTCACTCCCTGT s panTro4.chr4_GL389869_random 34138 544 + 69473 GAAAGTACTTTTGATAATCCCAGAAATATCAAGACTCCGGTGGCAGTGAATATTTGGTTTCCACTTTGAAATGTAGATCACATTAGCAGGATATTCCCTAAAGGAGCTTTACA-CACAGTTGGTCCTCCCTCTGTCAACCTCATCTCCGACTCAAGTGGATCGAGTTCAAAACAGCCACACTTGTTCCAGAAGCCAA--TTTTGTTTGGGCCATAATATAGA-GATGGTCCCATCCAGCCTTTAAGCATGATAAGCATAGGTAGC--TGTTTGTTACAATAGTTGAAAGGAGAAAGCCATAAAAACA------------------AAGTCTCCCACTATTTCATCCAATTTAAAATTGCGGAAGGTGACAGAAAATATAACTGAAAGCTTTTCCTAACCTCTCTTTAAAGAAGTCCTAGAAAAAAAAAAAAAAGAAAGCATTTA-------------TTTCCTTGATGATTTCTAAGTAATAACTAAATATGGATGCAATTTTGAACCGTGTATGGATGTTCCCAGTGTAA---TGTTCCTCTTTTGGAG--ACATCGCATCATATTTATTTATCTCACTCCCTGT i panTro4.chr4_GL389869_random C 0 C 0 s nomLeu3.chr7b 1387063 539 - 115148730 GAAAGTACTTTTGATAATCCCAGAAATATCAAGACTCCAGTGGCAGTGAATATTTGGTTTCCACTTTGAAATGTAGATCACATTAGCAGGATATTCCCTAAAGGAGCTTTATA-CACAGTTGGTCCTCTCTCTGTCAACCTCATCTCTGACTCAAGTGGATCGAGTTCAAAACAGCCACACTTGTTCCAGAAGCCAA--TTTTGTTTGGGCCATAATATAGA-GATGGTTTCATCCAGCCTTTAAGCATGCTAAGCATAGGTAGCTATGTTTGTTATAATAGTTGAAAGGAGAAAGCCATAAAAACA------------------AAATCTCCCACTATTTCATCCAATTTAAAATTGCGGAAGGTGATAGAAAATATAACTGAAAGCTTTCCATAACCTCTCTTAAAAGAAGTCCTAA-------AAAAAAAGCAAGCATTTA-------------TTTCCTTAATAATTTCCAAGTAATAACTAAATATGGATGCAATTTTGAACCATGTATGGATGTTCCCAGTGTAA---TGTTCCTCTTTTGGGG--ACATCAAATCATATTTATTTATCTCACTCCCTGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 489349 551 - 184069350 GAAAGTCCTTTTGATAATCCCAGAAATATTAAGACTCCAGTGGCAGCGAATATTTGATTTCCACTTTGAAACGTAGGTCACATTAGCAGGATATTCTCTAAAGGAGCTTTGTA-TGCAGCTGGTCCTCTCTCTGTCAACCGCATCTGCGACTCAAGTGGACCGAGTTCAACACAGCCACACTTGTTCCAGAAGCCAA--TTTTGTTTGGGCCCTAATATAGA-GATGGTCCCATCCGGCCTTTAAGCATGCGAAGTGTGGGCAGCTCTGTTTGTTACCATAGCTGAAAGGAGAAAGCCGTAAAAACAAAATCTCTCCTAAAAGCGAAATCTCCCACTATTTCATCCGATTTAAAATTGCGGAA-GTGACAGAAAACAC--CGGAAAGGTTTCCC-AACCTCTCTTAAAAGAAGTCCTAG---------AAAAAGAAAGCATTTA-------------TTTCCTTAATGATTCCTAAGTAATAACTACATATGGATGCAATTCTGAACCATCTGCGGGTGTTCCCAGTGTAA---TGTTCCTCTTCCGGGG--ACATCGCATCACGTTTATTTATGTCACTCGCTGT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 490750 551 - 189454096 GAAAGTCCTTTTGATAATCCCAGAAATATTAAGACTCCAGTGGCAGCGAATATTTGATTTCCACTTTGAAACGTAGGTCACATTAGCAGGATATTCTCTAAAGGAGCTTTGTA-TGCAGCTGGTCCTCTCTCTGTCAACCGCATCTGCGACTCAAGTGGACCGAGTTCAACACAGCCACACTTGTTCCAGAAGCCAA--TTTTGTTTGGGCCCTAATATAGA-GATGGTCCCATCCGGCCTTTAAGCATGTGAAGTGTGGGCAGCTATGTTTGTTACCATAGCTGAAAGGAGAAAGCCGTAAAAACAAAATCTCTCCTAAAAGCGAAATCTCCCACTATTTCATCCGATTTAAAATTGCGGAA-GTGACAGAAAACAC--CGGAAAGGTTTCCC-AACCTCTCTTAAAAGAAGTCCTAG---------AAAAAGAAAGCATTTA-------------TTTCCTTAATGATTCCTAAGTAATAACTAAATATGGATGCAATTCTGAACCATCTGCGGATGTTCCCAGTGTAA---CGTTCCTCTTCCGGGG--ACATCGCATCACGTTTATTTATGTCACTCCCTGT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 388275 551 - 178775436 GAAAGTCCTTTTGATAATCCCAGAAATATTAAGACTCCAGTGGCAGCGAATATTTGATTTCCACTTTGAAACGTAGGTCACATTAGCAGGATATTCTCTAAAGGAGCTTTGTA-TGCAGTTGGTCCTCTCTCTGTCAACCGCATCTGCGACTCAAGTGGACCGAGTTCAACACAGCCACACTTGTTCCAGAAGCCAG--TTTTGTTTGGGCCGTAATATAGA-GATGGTCCCATCCGGCCTTTAAGCATGCGAAGTGTGGGTAGCTATGTTTGTTACCATAGCTGAAAGGAGAAAGCCGTAAAAACAAAATCTCTCCTAAAAGCGAAATCTCCCACTATTTCATCCGATTTAAAATTGCGGAA-GTGACAGAAAACAC--CGGAAAGCTTACCC-AACCTCTCTTAAAAGAAGTCctag---------aaaaagaaagcattta-------------tttccttaatgattCCTAAGTAATAACTAAATCTGGATGCAATTCTGAACCATCTGCGGATGTTCCCAGTGTAA---TGTTCCTCTTCTGGGG--ACATCGCATCATGTTTATTTATGTCACTCCCTGT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 445104 551 - 135778131 GAACGTCCTTTTGATAATCCCAGAAATACTAAGACTCCAGTGGCAGCGAATATTTGATTTCCACTTTGAAGCGTAGGTCACATTAGCAGGATATTCCGTAAAGGAGCTTTGTA-TGCAGTTGGTCCTCTCTCTGTCAACCGCATCTGCGACTCAAGTGGATCGAGTTCAACACAGCCACACTTGTTCCAGAAGCCAA--TTTTGTTTGGGCCGCAATATAGA-GATGGTCCCATCCAGCC-TAAAGCATGCGAAGTGTGGGTAGCTATGTTTGTTACGATAGTTGAAAGGAGAAAGCTGTAAAAACAAAATCTCTCCTAAAAGCGAAATCTCCCGTTATTTCATCCGATTTAAAATTGCGGAAGGTGACAGAAAACAC--CCGAAAGCTTTCCC-AGCCTCTCTTAAAGGAAGTCCTAG---------AAACAGAAAGCGTTTA-------------TTTCCTTAGTGATTCCTAAGTAATAACTAAATATGGATGCAATTTTGAACCATCTGTGGATGTTCCCAGTGTAA---TGTTCCTCTTCTGGGG--ACATCGCATCATGTTCATTTATGTCACTCCCTGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 413125 524 + 190850796 GAAAGGCCTTTTGATAATCCCAGAAATAGTAAGACTCCAGTGGCAGAGAATATTTCGTTTCCACTTTGAAATGTAGATCACATGGGCAGGGTATTCTCTAAGGGAGCCTTGTA--GCAGCTGATCCTCTCTGTGTCAG--TTACCTCCAGCTCAAGTGGATCGAGTTTAGAACATCCGCATTTGTTCCCGAAGCCAGTTTTTTGTTTGGGCCATAATATAGA-GATGCTTCCCTCCAGGCTTTAAGCCTCCTAAGTGAAGGCAGCTATGTCTGTTAAAAGAGTTGAAAGGGGAAAGCCGTAAACACGAAATCTACCAT-------AAGCAGAACACTATTTCATCCAATTTTAAATTGTGGAA--TGACAGGAAG-ATAACTGAAAGCTTTCCACAACCTCTCTTTCCAGAAGTCCCAG-------AAAAAAAAGAAGCATCTG-------------TTTCCTTAATGATTTCTAAGTCACAGCTAAATACGGATGCAATTTTGGAATATCCGTGA---------------------TGCTCTTTTGGGG--ACATGGTATCA----TAGTTCTCTCACCCCCTGT i calJac3.chr3 C 0 C 0 s canFam3.chr16 41764311 557 + 59632846 GAAAGTTTTTTTGATAACCCAAAAAATATTAATAATTGAGATGTGTTGAAGATTTGGTTTCTACTTTGAAATATAGACCACTTTAGCAGGGGACACTCTAAAGGAGGTTTAGGGTGTAACTG--CCTGTCAGTGTTACCCTAA-----GATTCAAGTGGATTGCATTCAAAATAGATACATTTCTCCCAGAAGGCAA--TTTTGTTTGGAGCATAATGTAGGCCATGGTTCCATCCAGTTTTGAAGCATGCTGATTGTAGGCAGCTATATTTATTACAACAGTTGAAAGGAGAACATCATAAAAATAAAAAGTCTCCCAC-----AAGTAGGCCACTATTTCATCTGATTTAGAATTGTGGAAGCTGAAAGCAAAAATAACCGAAAGCTTCCTCTAACCT-TCCTAAAAGGAGTCTTAG----------AGAAGAAAGAATTTCATGTGTGTGTGTTTTTTTCCAAAGATTTCTAAGTAATGAATGAATATACATTCAATTTTGGAATATATATGAATATTCCAAGTGTAATAGTGTCCCTCTTTTGGGGCAGCATCAAATCA----TATTTCTTTTACTCTCTGT i canFam3.chr16 I 3490 C 0 e ponAbe2.chr4_random 19374044 0 + 23176937 C a score=4500.000000 s hg38.chrUn_KI270754v1 7303 1 + 40191 C s panTro4.chr4_GL389869_random 34682 1 + 69473 C i panTro4.chr4_GL389869_random C 0 C 0 s nomLeu3.chr7b 1387602 1 - 115148730 C i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 489900 1 - 184069350 C i rheMac3.chr5 C 0 C 0 s macFas5.chr5 491301 1 - 189454096 C i macFas5.chr5 C 0 C 0 s papAnu2.chr5 388826 1 - 178775436 C i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 445655 1 - 135778131 C i chlSab2.chr7 C 0 C 0 s calJac3.chr3 413649 1 + 190850796 C i calJac3.chr3 C 0 C 0 s tupBel1.scaffold_4210.1-134973 13146 1 + 134973 C i tupBel1.scaffold_4210.1-134973 N 0 I 1962 s canFam3.chr16 41764868 1 + 59632846 C i canFam3.chr16 C 0 C 0 e ponAbe2.chr4_random 19374044 0 + 23176937 C a score=208050.000000 s hg38.chrUn_KI270754v1 7304 128 + 40191 CTTTCCCCCATTAAAGT-----------GGACCTGTGCATAGTTGATGCTTGTACCAAGATACAC--ACCTT---CTTCCTGTTTCCAGGACGGTACGATGGGAGGCAGGAGTGAGTGTCCGGAAAGAGGGAAGAAAAAAAAAA s panTro4.chr4_GL389869_random 34683 126 + 69473 CTTTCCCCCATTAAAGT-----------GGACCTGTGCATAGTTGATGCTTGTAGCAAGATACAC--ACCTT---CTTCCTGTTTCCATGATGGTACGATGGGAGGCAGGAGTGAGTGTCCGGAAAGAGGGAAG--AAAAAAAA i panTro4.chr4_GL389869_random C 0 C 0 s nomLeu3.chr7b 1387603 128 - 115148730 CTTTCCCCCATTAAAGT-----------GGACCTGTGCATAGTTGATGCTTGTACCAAGATAGAT--ACCTT---CTTCCTGTTTCCAGGATGGTATGATGGGAGGCAGGAGTGAGTGTCCGGAAAGAGGGAAGAAAAAAAGAA i nomLeu3.chr7b C 0 I 8462 s rheMac3.chr5 489901 120 - 184069350 CTGTCCCCCACTGAAGC-----------GGACCTGGGCA-GGCTGATGGTTGTACCAAGATGCGC--ACCTT---CTACCTGTTTCCAGGGCGGTGCGAGGGGAGGCAGGAGC--GTGTCCGCAAGGAGGGAAG--AAAAA--- i rheMac3.chr5 C 0 C 0 s macFas5.chr5 491302 120 - 189454096 CTGTCCCCCACCGAAGC-----------GGACCTGGGCA-GGCTGATGGTTGCACCAAGATGCGC--ACCTT---CTGCCTGTTTCCAGGGCGGTGCGAGGGGAGGCAGGAGC--GTGTCCGCAAGGAGGGAAG--AAAAA--- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 388827 121 - 178775436 CTGT-CCCCACTGAAGC-----------GGACCTGGGCACGGCTGATGGTTGTACCAAGATGTGC--ACCTT---CTTCCTGTTTCCAGGGCGGTGCGATGCGAGGCAGGAGT--GTGTCCccaaggagggaag-aaaaaa--- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 445656 121 - 135778131 CTGTCCCCCACTGAAGC-----------GGACCTGGGCACGGCTGGTGGTTGTACCCAGATGCGC--ACCTT---CTTCCTGTTTCCAGGGCGGTGTGATGGGAGGCAGGACT--GTGTCCGGAAAGAGGGAAG--AAAAA--- i chlSab2.chr7 C 0 C 0 s calJac3.chr3 413650 93 + 190850796 CTTT-TCCCGTTAAAAT-----------GGACCTGTG-------------------------------CCTT---CTTCCTGTTTCCCAGGAGGTATGATGGGAGGCAGGGGTGAGCATCCAGAAGGAGGGAAG--AGAAG--- i calJac3.chr3 C 0 C 0 s canFam3.chr16 41764869 134 + 59632846 -TTTTCTCCATTAAAGTGAGTGAAAAGAGGACCTGTACATATTTCGTGATTATATCGAAATACACATACCTTTTATTTTCTTTTTCCAAGACGGGATGCTATTATGTAAGAGTGAGTGTGCAGATGG-GGAAAG--AA------ i canFam3.chr16 C 0 C 0 e tupBel1.scaffold_4210.1-134973 13147 1962 + 134973 I e ponAbe2.chr4_random 19374044 0 + 23176937 C a score=500545.000000 s hg38.chrUn_KI270754v1 7432 210 + 40191 AACAAATCTCATCATTGTTTATTTGTCTACTGCTTTTGGCTCTGCTGAGATGTGAAGTCATTCTCATTTCATTGTGTTCGGAAGTATAGCCTGCGACTTGTTGAAAGCTTAGCGCTAGACCTGCCTCTCAGAGACTTGCTCCCTCTGGAAATGC-CCAGCTGAGGATGCGCGTGGTGCGTG------TTGAAGAACACTGCCTTAGAGG-TGGACACT s panTro4.chr4_GL389869_random 34809 209 + 69473 AACAAATCTCGTCGTTGCTTATTTGTCTACTGCTTTTGGCTCTGCTGAGATGTGAAGTCATTCTCATTTCTTTGTGTTCGGAAGTATAGCCTGCGACTTGTTGAAAGCTTAGCGCTAGACCTGCCTCTCAGAGACTTGCTCCCTCTGGAAATG--CCAGCTGAGGATGCGCGTGGTGCGTG------TTGAAGAACACTGCCTTAGAGG-TGGACACT i panTro4.chr4_GL389869_random C 0 C 0 s nomLeu3.chr7b 1396193 210 - 115148730 aacaaaTCCCATCGTTGCTTATTTGTCTACTGCTTTTGGCTTTGCTGAGATGTGAAGTCATTCTCATTTCTTTGTGTTCGGAAGTATCGCCTGCGGCTTGCTGAAAGCTGAGCGCTAGACCTGCCTCTCAGAGACTTGTTTCCTCTGGAAATGC-CCAGCTGAGGATACGCGTGGTGCGTG------TTGAAGAACACTACCTTAGAGT-TGGACACT i nomLeu3.chr7b I 8462 C 0 s rheMac3.chr5 490021 207 - 184069350 ---AAATCCCATGGTTGCTTATTTGTCTACTGCTTCTGGCTCTGCTGAGAGGTGAAGTCATTCTCATTTCTTTGTGTTCGGAAGTATCGCCTGCGGCTCGTTGAAAACTTAGCGCTAGACCTGCCTCTCGGAGACTTGCTCCCTCTGGAAATGC-CCAGCTGAGGATGCGCGTGGCGCGTG------TTGAAGCGCAGTGCCTGGGAGT-TGGACACT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 491422 207 - 189454096 ---AAATCCCATGGTTGCTTATTTGTCTACTGCTTCTGGCTCTGCTGAGAGGTGAAGTCATTCTCATTTCTTTGTGTTCGGAAGTATCGCCTGCGGCTCGTTGAAAACTTAGCGCTAGACCCGCCTCTCGGAGACTTGCTCCCTCTGGAAATGC-CCAGCTGAGGATGCGCGTGGCGCGTG------TTGAAGCGCAGTGCCTGGGAGT-TGGACACT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 388948 207 - 178775436 ---aaatcccatggtTGCTTATTTGTCTACTGCTTCTGGCTCTGCTGAGAGGTGAAGTCATTCTCGTTTCTTTGTGTTCGGAAGTATCGCCTGCGGCTCGTTGAAAACTTAGCGCTAGACCTGCCTCTCGGAGACTTGCTCCCTCTGGAAATGC-CCAGCTGAGGATGCGCGTGGCGCGTG------TTGAAGCGCAGTGCCTGGGAGT-TGGACACT i papAnu2.chr5 C 0 I 582 s chlSab2.chr7 445777 207 - 135778131 ---AAATCCCATGGTTGCTTATTTGTCTACTGCTTCTGGCTCCGCTGAGATGTGAAGTCATTCTCATTTCTTTGTGTTCGGAAGTGTCGCCTGCGGCTTGTTGAAAACTTAGCGCTAGACCTGCCTCTCGGAGACTTGCTCCCTCTGGAAATGC-CCAGCTGAGGATGCGCGTGGCGCGTG------TTGAAGCGCAGTGCCTGGGAGT-TGGACACT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 413743 206 + 190850796 ---AAATTCCATCCTTACTTATCTGTCTGCCGCTTTTGGCTCTACAGAGATGTGAAGTCATTCTTGCTTCTTTGTGTTCAG-AGAATTGCCTGTGGCTTGTTGAAAGCTTATCCCTTGACCTGCCTCTCAGAAACTTGTTCTCTCTGAAAACGC-CCAGCTGAGGATGCTTGTGGTGCATG------TTGAAGGACCCTGTCTTAGGGTCTGGTCAC- i calJac3.chr3 C 0 C 0 s canFam3.chr16 41765003 204 + 59632846 AAAAAATCCCATCCTTATATATTTGTCTGTAGCTTTTGACTATAGTGAAATGTGAagttattgtcaaat-ttaatgttcagaagaatcatctggggcttgttaaaaacatattctcaaacctggttctcagagattt----ctTCTGGGAATGCGCTAGTTGATAATGCCCATAGCTCCTGAACATTTTGAAGAGT----TCCAAGAGT-CTGA---- i canFam3.chr16 C 0 C 0 e tupBel1.scaffold_4210.1-134973 13147 1962 + 134973 I e ponAbe2.chr4_random 19374044 0 + 23176937 C a score=-8803.000000 s hg38.chrUn_KI270754v1 7642 5 + 40191 T------------------------------------------------------GGGG s panTro4.chr4_GL389869_random 35018 32 + 69473 T---------------------------GGGGACAGGTGCGCTGCGGCCGGACTCGGGG i panTro4.chr4_GL389869_random C 0 C 0 s nomLeu3.chr7b 1396403 59 - 115148730 TGTGGACAGGTGCGCTGAGGCCGGAGTCGGGGACAGGTGCGCTGCGGCCGGAGTCGGGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 490228 5 - 184069350 ------------------------------------------------------TGTgg i rheMac3.chr5 C 0 C 0 s macFas5.chr5 491629 5 - 189454096 ------------------------------------------------------TGTGG i macFas5.chr5 C 0 I 522 s papAnu2.chr5 389737 5 - 178775436 ------------------------------------------------------TGGGG i papAnu2.chr5 I 582 C 0 s chlSab2.chr7 445984 5 - 135778131 ------------------------------------------------------TGTGG i chlSab2.chr7 C 0 C 0 e canFam3.chr16 41765207 0 + 59632846 C e tupBel1.scaffold_4210.1-134973 13147 1962 + 134973 I e calJac3.chr3 413949 0 + 190850796 C e ponAbe2.chr4_random 19374044 0 + 23176937 C a score=17122.000000 s hg38.chrUn_KI270754v1 7647 9 + 40191 ACAGGTGCG s panTro4.chr4_GL389869_random 35050 9 + 69473 ACAGGTGCG i panTro4.chr4_GL389869_random C 0 C 0 s nomLeu3.chr7b 1396462 9 - 115148730 ACAGGTGCG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 490233 9 - 184069350 acgggtgcg i rheMac3.chr5 C 0 I 221 s macFas5.chr5 492156 9 - 189454096 acgggtgcg i macFas5.chr5 I 522 C 0 s papAnu2.chr5 389742 9 - 178775436 ACAGGTGCG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 445989 9 - 135778131 ACAGGTGCG i chlSab2.chr7 C 0 C 0 e canFam3.chr16 41765207 0 + 59632846 C e tupBel1.scaffold_4210.1-134973 13147 1962 + 134973 I e calJac3.chr3 413949 0 + 190850796 C e ponAbe2.chr4_random 19374044 0 + 23176937 C a score=1500.000000 s hg38.chrUn_KI270754v1 7656 1 + 40191 C s panTro4.chr4_GL389869_random 35059 1 + 69473 C i panTro4.chr4_GL389869_random C 0 C 0 s nomLeu3.chr7b 1396471 1 - 115148730 C i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 492165 1 - 189454096 C i macFas5.chr5 C 0 C 0 s papAnu2.chr5 389751 1 - 178775436 C i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 445998 1 - 135778131 C i chlSab2.chr7 C 0 I 7001 e canFam3.chr16 41765207 0 + 59632846 C e tupBel1.scaffold_4210.1-134973 13147 1962 + 134973 I e calJac3.chr3 413949 0 + 190850796 C e rheMac3.chr5 490242 221 - 184069350 I e ponAbe2.chr4_random 19374044 0 + 23176937 C a score=12477.000000 s hg38.chrUn_KI270754v1 7657 22 + 40191 TGCGGCCGGACTCGTGGACAGT s panTro4.chr4_GL389869_random 35060 22 + 69473 TGCGGCCGGACTCGGGGACAGG i panTro4.chr4_GL389869_random C 0 C 0 s nomLeu3.chr7b 1396472 22 - 115148730 TGCGGCCGGACTTGCCGACAGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 492166 22 - 189454096 TGCGGCCAGGCGTGGGGACATG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 389752 22 - 178775436 TGCGGCCCGGCGTGCGGACATG i papAnu2.chr5 C 0 C 0 s canFam3.chr16 41765207 15 + 59632846 -------GAACCCTTAGAAAGG i canFam3.chr16 C 0 C 0 e chlSab2.chr7 445999 7001 - 135778131 I e tupBel1.scaffold_4210.1-134973 13147 1962 + 134973 I e calJac3.chr3 413949 0 + 190850796 C e rheMac3.chr5 490242 221 - 184069350 I e ponAbe2.chr4_random 19374044 0 + 23176937 C a score=29298.000000 s hg38.chrUn_KI270754v1 7679 17 + 40191 TGCGCTGCGGCTGGAGC s panTro4.chr4_GL389869_random 35082 17 + 69473 TGCGCTGCGGCTGGAGC i panTro4.chr4_GL389869_random C 0 C 0 s nomLeu3.chr7b 1396494 17 - 115148730 TGCGCTGCGGCTGGAGC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 492188 17 - 189454096 TGAGCTGCGGCTGGAGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 389774 17 - 178775436 TGCGCTCCGGCCGGAAC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 453000 17 - 135778131 TGCGCTGCGGCTGGAGC i chlSab2.chr7 I 7001 C 0 s calJac3.chr3 413949 13 + 190850796 ----CTGCGGCTGAGGC i calJac3.chr3 C 0 C 0 s canFam3.chr16 41765222 17 + 59632846 TGGAATGTTGCTGGAGG i canFam3.chr16 C 0 C 0 e tupBel1.scaffold_4210.1-134973 13147 1962 + 134973 I e rheMac3.chr5 490242 221 - 184069350 I e ponAbe2.chr4_random 19374044 0 + 23176937 C a score=1288939.000000 s hg38.chrUn_KI270754v1 7696 556 + 40191 TGGCCCCGCATTTCTTCACTTTCTGAATCGTAATGCCCTCAGTGAGTTGCAATTTCATATTGCTACATTTGTTTTTA-----------------CTGGTGTTAAATTCCGGCAGTTAAATCTTTCAAGGGTTACT---AAAAAATGCGAATAT-TTGTGTATTTACATGTCTAAGGAGAAGACCCTTTGGCAATCCAGGAGGAG-ACAAGGACTCAGG-CTTTTTCTTC-------CAGTTAACTGTGGAGGACACGCCGTTGCTGCTGTGGCTGCTga-------------aggaggagaaatctccttgttctcccgtcttcctgctctccagtcccctgtctgggcttcccatttgctgaac-acagccaga--------------tgccagccgagctcaggaagcgtagtttgcagggggtgtatccagagacacagctcggagcaagggaagcgagaggaagagatcCAACCTTAGGACAAAGGGCCAAGAACTTGGAGAGGACTTGGCCTAGGAGACAATCTAGGGCAAGCACGTTATCCAGGGTGACT----GGGCAGGCAGAG-AAACCCCAAGAGGCATAGAGC-TCATGTCCGTCCAAAGTAGGAGAGT s panTro4.chr4_GL389869_random 35099 556 + 69473 TGGCCCCGCATTTCTTCACTTTCTGAATCGTAATGCCCTCAGTGAGTTGCAATTTCATATTGCTACGTTTGTTTTTA-----------------CTGATGTTAAATTCCGGCAGTTAAATCTTTAAAGGGTTACT---AAAAAATGCGAATAT-TTGTGTATTTACATGTCTAAGGAGAAGACCCTTTGGCAATCCAAGAGGAG-ACCAGGACTCAGG-CTTTTTCTTC-------CAGTTAACTGTGGAGGACACGCCGTTGCTGCTGTGGCTGCTga-------------aggaggagacatctccttgttctcccgccttcctgctctccggtcccctgtctgggcttcccatttgctgaac-acagccaga--------------tgccagccgagctcaggaagcgtagtttgcagggggtgtatccagagacacagctcggagcaagggaagtgagaggaagagatccaaccttaggacaaagggccaagaacTTGGAGAGGACTTGGCCTAGGAGACAATCTAGGGCAAGCACGTTATCCAGGGTGACT----GGGCAGGCAGAG-AAACCCCAAGAGGCATAGAGC-TCATGTCCGTTCAAAGTAGGAGAGT i panTro4.chr4_GL389869_random C 0 C 0 s nomLeu3.chr7b 1396511 556 - 115148730 TGGCCCCGCATTTCTTCACTTTCTGAATCGTAATGCCCTCAGTGAGTTGCAATTTCATATTGCTACATTTGTTTTTA-----------------CTGTTGTTAAATCCTGGCAGTTAAATCTTTAAAGGCTTACT---AAAAAATGCGGATATATTGTGTATTTACATATCTAAGAAGAAGACCCTTTGGCAATCCAGGAGGAG-ACCAGGACTCAGA-CTTTTTCTTC-------CAGTTAACTGTGGAGGACACGCCGTTGCTGCTGCGGCTGCTGC-------------aggaggagaaatctccttgttctcccgtcttcctgctctccagtcccctgtctgggcttcccgtttgctgaac-ccagccaga--------------tgccagccgagctcgggaagcgcagtttgcagggggtgtatccagagacacagctcggagcaagggaagcgagaggaggagatccaacctcaggaaaaagggccaagaacTTGGAGAGGACTTGGCCTAGGAGACAATCTAGGGCAAGCACGTTATCCAGGGTGACT----GGGCAGGCAGAG-AAACCCCAAGAGGCATAGAGC-TCATGTCCGTTCAAAGTAGT-GAGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 490463 532 - 184069350 TGGCCCCGCATTCCTTCACTTTCTGAATCGTAATGCCCTCAGTGAGTTGCAATTTCATATTGCTCCATTTGTTTTTA-----------------CTAATGTTAAATCCTGGCAGTTAAATCTCTAAAGGCTTACT---AAAAAATACGAATATATTGTGTATTTACATGTCTAAGGAGAAGACCCTTTGGCAACCC---AGGAG-ACCAGGACTCAGG-TTTTTTCTTC-------CAGTTAACTGTGGAGgacacgccgttgctgctgggggtgctgc-------------aggaggagaaatctccttgttctcccgtcttcctgctctccagtctcctgtctgggcttcccgtttgctgaac-ccagccaga--------------agccagccgagctcgggaagcctggtttgcacggggtgtatccagagacacagctcggagcaagggaagcgagaggaagagacccagcctcgggacaaagggccaagaacTTGGAGAGGACTTGGCCTGGGAGACAATCTAGGTCATGCGCGTTATCCAGGG----------------------------CGAGAGGCATAAAGCTTCATGTCCGTTCAAAGTAGGAGAGT i rheMac3.chr5 I 221 C 0 s macFas5.chr5 492205 531 - 189454096 TGGCCCCGCATTCCTTCACTTTCTGAATCGTAATGCCCTCAGTGAGTTGCAATTTC-TATTGCTCCATTTGTTTTTA-----------------CTGATGTTAAATCCTGGCAGTTAAATCTCTAAAGGCTTACT---AAAAAATACGAATATATTGTGTATTTACATGTCTAAGGAGAAGACCCTTTGGCAACCC---AGGAG-ACCAGGACTCAGG-TTTTTTCTTC-------CAGTTAACTGTggaggacacgccgttgctgctgggggtgctgc-------------aggaggagaaatctccttgttctcccgtcttcctgctctccagtctcctgtctgggcttcccgtttgctgaac-ccagccaga--------------agccagccgagctcgggaagcctggtttgcacggggtgtatccagagacacagctcggagcaagggaagcgagaggaagagacccagcctcgggacaaagggccaagaacTTGGAGAGGACTTGGCCTGGGAGACAATCTAGGGCACGCGCGTTATCCAGGG----------------------------CGAGGGGCATAAAGCTTCATGTCCGTTCAAAGTAGGAGAGT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 389791 518 - 178775436 TGGCCTCACATTCCTTCACTTTCTGAATCGTAATGCCCTCAGTGAGTTGCAATTTCATATTGCTCCATTTGTTTTTA-----------------CTGAT--------------GTTAAATCTCTAAAGGCTTACT---AAAAAATGCGAATATATTGTGTATTTCCATGTCTAAGGAGAAGACCCTTTGGCAACCC---AGGAG-ACCAGGACTcagg-ttttttcttt-------cagttaacTGTGGAGGACACGCCGTTGCTGCTGGGGGTGCTGC-------------AGGAGGAGAAATCTCCTTGTTCTCCCGTCTTCCTGCTCTCCAGTCTCCTGTCTGGGCTTCCCGTTTGCTGAAC-CCAGCCAGA--------------AGCCAGCCGAGCTCGGGAAGCCTGGTTTGCACGGGGTGTATCCAGAGACACAGCTCCGAGCAAGGGAAGCGAGAGGAAGCGATCCAACCTCAGGACAAAGGGCCAAGAACTTGGAGAGGACTTGGCCTGGGAGACAATCTAGGGCCCGCGCGTTACCCAGGG----------------------------CGAGGGGCATAAAGCTTCATGTCCGTTCAAAGTAGGAGAGT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 453017 522 - 135778131 TGGCCCCACAGTCCTTCACTTTCTGAATCGTAATGCCCTCAGTGAGTTGCAATTTCATATTGCTACATTTGTTTTTA-----------------CTGATGTTAAATCCTGGCAGTTAAATCTCTAAAGGCTTACT---AAAAAATGCGAATATATTGTGTATTTACATGTCTAAGGAGAAGACCCTTTGGCCACCC---AGGAG-ACCAGGACTCAGGTTTTTTTCTTC-------CAGTTAACTGTggaggacacgccgttgctgctgggggtgctgc-------------aggaggagaaatctccttgttctcccttctccctgctctccagtcccctgtctgggcttcgggtttgctgaac--------------------------ccagccgagctcgggaagcgtagtttgcacggggtgtatccagagacacagctcggagcgagggaagcgagaggaagagacccagcctcgggacaaagggccaagaacTTGGAGAGGACTTGGCCTGGGAGACAATCTAGGGCACGCGCGTTATCCAGGG----------------------------CGAGGGGCATAAAGCTTCATGTCCGTTCAAAGTAGGAGAGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 413962 552 + 190850796 TGACTCCATGTTTCTTCACTTTCTGAATCGTAAGGCTCTCCGTGAGTTGGAATTTCATATTTCTGTATTTTTTTTAA-----------------CTGATGTTGAATCCTGGCAGTTGAATCTTTAAAGGTTTACT---TAAAAATGCAAATATATTGTGTATTTGCATGTCTAAGGAGAAGACCCCTTGACAATCC---AGGAG-ACCAGAACTCAAA-TGTTCTCTTC-------CAGTTCACTGTGGAAGAC---CTGTTGCTGCTGGGGCTGCTGC-------------aggaggagaaatctcc-tgttctcc---ctccttgttctccagtcccctgtctgggatttctgcttggtgaac-ccagccaga--------------agccagctgagctccagaagcgtagcttgcaggggctgtatccagagacacagctcggggcaagggaagccagaggaagagatccagcctgagaacagaaggccaagggcTTGGAGAGGCCTTGACCTAGGAGACAAGCTAGGGCCAGCGAGTTATCCAGGGTGACTGTAGGGGCAGGCGGAG-AAACCCCGAGGGGCATGAAGCTTCACGTCCATTCCCAGTAGGAGAGT i calJac3.chr3 C 0 C 0 s canFam3.chr16 41765239 613 + 59632846 TGGTTTCATAATCCTTTACTTGCCTCATCATAGTGTACTCAGTGACTTGGAATTTCATATTTGTCCATTTGTGTGTGTGTGTGCATGTATATATTTAATGTTAAATCTTTGTGGTTTAATCTTTAAAAGCTGACTGGGAAAAAATGCAAATATACGTAGGACTCACATGTCAA---ATAAGATTTCTTGGCAACCGAGAAGGAGTTCCAGAATTCAAA-TTTTTTTTTCTCCTGCTCTGTTAACTGTTgaggatgcatagttgctgatggcagtgctgcttgaggtgaagagaagaggagaaatatctttctcttccccttctcctgcaacccagtctcctgcctggggtttccatttcctgaacaccagtcagaagccaaagcttctgagccaactgatcccaggaaacatagctgaaaggagtcatattctgggctacagagaagtggaagggaagggagaggca-aaatttaatctaagggcaaacagactgggacTTGGGGAGATCTTGGCTTGGTAGAGAA-CCAGGACAAG-ACATTACCTAGGGTGGGTATACGGGCAGAAGAAATAAATGCTAAGGGATCTAAAGGTTCAGGTCCATTCAAAGCAGCAGAAT i canFam3.chr16 C 0 C 0 e tupBel1.scaffold_4210.1-134973 13147 1962 + 134973 I e ponAbe2.chr4_random 19374044 0 + 23176937 C a score=15581.000000 s hg38.chrUn_KI270754v1 8252 7 + 40191 CTGGGCT s panTro4.chr4_GL389869_random 35655 7 + 69473 CTGGGCT i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19374044 7 + 23176937 CTGGGCT i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1397067 7 - 115148730 CTGGGCT i nomLeu3.chr7b C 0 T 6586 s rheMac3.chr5 490995 7 - 184069350 CTGAGGT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 492736 7 - 189454096 CTGAGGT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 390309 5 - 178775436 CT--GGT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 453539 7 - 135778131 CTGGGGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 414514 7 + 190850796 CTGGGCT i calJac3.chr3 C 0 C 0 s canFam3.chr16 41765852 7 + 59632846 CTGGGCA i canFam3.chr16 C 0 C 0 e tupBel1.scaffold_4210.1-134973 13147 1962 + 134973 I a score=199654.000000 s hg38.chrUn_KI270754v1 8259 86 + 40191 CTGCTCTCGGAG-TCGGAGCTGGGGGCCTTCAGGGTACTTCCTATGGAGACAGCCTA-GTTTATCAG-AAAAA-AGGGAACTTTCTTTTT--------- s panTro4.chr4_GL389869_random 35662 86 + 69473 CTGCTCTCGGAG-TCGGAGCTGGGGGCCTTCAGGGTACTTCCTATGGAGAGAGCCTA-GTTTATCAG-AAAAA-AGGGAACTTTCTTTTT--------- i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19374051 88 + 23176937 CTGCTCTCAGAG-TCGGAGCTGGGGGCCTTCAAGGTACTTCCTATGGAGAGAGCCTACGTTTATCAGAAAAAA-AAGGAATTTTCTTTTT--------- i ponAbe2.chr4_random C 0 C 0 s rheMac3.chr5 491002 87 - 184069350 CTGCGCTGGGAG-TCAGAGCTGGGGGCCTTTAGGGCACTTCCTATGGAGAGAGCCTAGGTTTGTCAG-AAAAG-AAGGAACTTTCTTTTT--------- i rheMac3.chr5 C 0 C 0 s macFas5.chr5 492743 87 - 189454096 CTGCGCTGGGAG-TCAGAGCTGGGGGCCTTTAGGGCGCTTCCTATGGAGAGAGCCTAGGTTTGTCAG-AAAAG-AAGGAACTTTCTTTTT--------- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 390314 88 - 178775436 CTGCGCTGGGAG-TCAGAGCTGGGGGCCTTTAGGGCACTTCCTATGGAGAGAGCCTAGGTTTAtcag-aaaagaaaggaacttTCTTTTT--------- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 453546 88 - 135778131 CTGCGCTGGGAG-TCAGAGCTGGGGGCCTTTAGGGCACTTCCTATGGAGAGAGCCTAGGTTTATCAG-AAAAGAAAGGAACTTTCTTTTT--------- i chlSab2.chr7 C 0 C 0 s calJac3.chr3 414521 87 + 190850796 CTGCTCTGGGAG-TCAGAGCTGGGGGCCTACAGGATACTTCCTATGGAGTGACCCTAAGCTTATCAG-AAAAA-CATGAGCTTttttttt--------- i calJac3.chr3 C 0 I 804 s canFam3.chr16 41765859 95 + 59632846 CTATTCTGGGGGTTCAGAGCT-AGGACAATCAGAAGA-TTTCTATTGAGAGAGTCTAGGTTTATCAG-AAGAA-AAGGGACTTTTCCACTGGGTGGTCT i canFam3.chr16 C 0 C 0 e tupBel1.scaffold_4210.1-134973 13147 1962 + 134973 I e nomLeu3.chr7b 1397074 6586 - 115148730 T a score=1087153.000000 s hg38.chrUn_KI270754v1 8345 456 + 40191 TACCATCTAGCCTTCACCTTGGCAGGGAGACAGGTGTTT-TGAGTAGAAACACTTCAACTCGACATGTCAAAC-------CAGTGCTTCAGCAGAGCTGTGCCTGGCCCGCCCA-CCTC---------------------------------------------------------------------------------------T-------------------------------------CCCCTACCCTCGGTTTTGGTCCAGAGTCTATTCTGAATGTCTGATGTCTCTCTTGGTTAGTGTGATTGAAATACGGCAGAAAGC--CGATTGCATCGTGTGGGGAAGTTGAAATCAATGCAACCAACAATTATATTAACGGTCTAGTTAAGAATAAAAAAGTAATAGAACAGACGTGCCTTGGTGAACATTTATTTTCTATGGAGAAATAAACATAGTTGCTGCTTTTGGACTCCACCCTGGGCAA-CAAGGTAATGAATGTGGAGTTAGGTGGTGACTAAAGAATTTGGATTCTTTCCTCCAGGTTACAATGCTCGTTAAGGGGCAGCCTGTAATGAAACCTGCGAT s panTro4.chr4_GL389869_random 35748 456 + 69473 TACCATCTAGCCTTCACCTTGGCAGGGAGACAGGTGTTT-TGAGTAGAAACACTTCAACTCGACATGTCAAAC-------CAGTGCTTCAGCAGAGCTGTGCCTGGCCCGCCCA-CCTC---------------------------------------------------------------------------------------T-------------------------------------CCCCTGCCCTTGGTTTTGGTCCAGAGTCTATTTTGAACGTCTGATGTCTCTCTTGGTTAGTGTGATTGAAATACGGCAGAAAGC--CGATTGCATCGTGTGGGGAAGTTGAAATCAATGCAACCAACAATTATATTAACGGTCTAGTTAAGAATAAAAAAGTAATAGAACAGACGTGCCTTGGTGAACGTTTATTTTCTATGGAGAAATAAACATAGTTGCTGCTTTTGGACTCCACCCTGGGCAA-CAAGGTAATGAATGTGGAGTTAGGTGGTGACTAAAGAATTTGGATTCTTTCCTCCAGGTTACAATGCTCATTAAGGGGCAGCCTGTAATGAAACCTGCGAT i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19374139 456 + 23176937 TACCATCTAGCCTTCACCTTGGCAGGGAGACAGGTGTTT-TGAGTAGAAACATTTCAACTCAACATGTCAAAC-------CAGTGACTCAGCAGAGCTGTGCCTGGCCCGCCCA-CCTC---------------------------------------------------------------------------------------T-------------------------------------CCCCTGCCCTCGGTTTTGGTCCACAGTCTATTTTAAATGTCTGATGTCTCTCTTGGTTAGTGTGATTGAAATGCCGCAGAAAGC--CAATTGCATCGTGTGGGGAAGTTGAAATCAATGCAACCAACAATTATATTAACAGTCTAGTTAAGAATAAAAAAGTAATAGAACAGATGGGCCTTGGTGAACGTTTATTTTCTGTGGAGAAATAAACATAGTTGCTGCTTTTGGACTCCACCCTGGACAA-CAAGGTAATGAATGTGGAGTTAGGTGGTGACTAAAGAATTTGTATTCTTTCCTCCAGGATACAATGCTCGTTAAGGGGCAGCCTGTAATGAAATCTGCGAC i ponAbe2.chr4_random C 0 C 0 s rheMac3.chr5 491089 520 - 184069350 TACCATCTAGCCTTCACCTTGGCAGGGAGACAGGTGTTT-TGAGTAGAAACCCTTCAACTCAACGTGTCAAAC-------CAGTGCCTCGGCAGAGCTGTGCCTGGCCTGCCCA-CCTCTCCCCTGCCCTGGGCTTTGGTCCAGAGTCTCTCTCAGCAGG-----------------------GCTGTGCCTGGCCTGCCCACCTCT-------------------------------------CCCCTGCCCTGGGCTTTGGTCCAGAGTGTATTTTAACTGTCTGATGTCTCTCTTGGTTAGTGTGAGTGAAATGCCACAGAAAAC--CAATTGCATCCTGTGGGGAAGCTGAAATCAATGCAACCAACAATTATATTAACAGTCTAGTTAAGAATAAAAAAACAATAGAACAGACGTGCCTTGGTGGAGGTGTATTTTCTGTGGAGAAATAAACACAGTTGCCGCTTTTGGACTCCACTCTGTACAA-CACGGTAATGAACGTGGAGTTAGGTGGTGACTAAAGAATTTGGATTCTTTCCTGAAGATTACAATGCTCATTAAGGAGCAGCCTGTCATGAAACCTGCAAC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 492830 520 - 189454096 TACCATCTAGCCTTCACCTTGGCAGGGAGACAGGTGTTT-TGAGTAGAAACCCTTCAACTCAACGTGTCAAAC-------CAGTGCCTCAGCAGAGCTGTGcctggcctgccca-cctctcccctgccctgGGCTTTGGTCCAGAGTCTCTCTCAGCAGGGCTGTGCCTGGCCTGCCCACCTC-----------------------T-------------------------------------CCCCTGCCCTCGGTTTTGGTCCAGAGTGTATTTTAACTGTCTGATGTCTCTCTTGGTTAGTGTGAGTGAAATGCCACAGAAAAC--CAATTGCATCCTGTGGGGAAGCTGAAATCAATGCAACCAACAATTATATTAACAGTCTAGTTAAGAATAAAAAAACAATAGAACAGACGTGCCTTGGTGGAGGTGTATTTTCTGTGGAGAAATAAACACAGTTGCCGCTTTTGGACTCCACTCTGTACAA-CACGGTAATGAACGTGGAGTTAGGTGGTGACTAAAGAATTTGGATTCTTTCCTGAAGATTACAATGCTCATTAAGGAGCAGCCTGTCATGAAACCTGTGAC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 390402 520 - 178775436 TACCATCTAGCCTTCACCTTGGCAGGGAGACAGGTGTTT-TGAGTAGAAACCCTTCAACTCAACGTGTCAAAC-------CAGTGCCTCAGCAGagctgtgcctggcctgccca-CCTCTCCCCTGCCCTGGGTTTTGGTCCAGAGTCTCTCTCAGCAGa-----------------------gctgtgcctggcctgccca----CCTCT---------------------------------CCCCTGCCCTGGGTTTTGGTCCAGAGTGTATTTTAACTGTCTGATGTCTCTCTTGGTTAGTGTGAGTGAAATGCCACAGAAAAC--CAATTGCATCCTGTGGGGAAGCTGAAATCAATGCAACCAACAATTATATTAACAGTCTAgttaagaataaaaaaacaatAGAACAGACGTGCCTTGGTGGAGGTttattttctgtggagaaataAACACAGTTGCCGCTTTTGGACTCCACTGTGTACAA-CATGGTAATGAACGTGGAGTTAGGTGGTGACTAAAGAATTTGGATTCTTTCCTCCAGATTACAATGCTCGTTAAGGAGCAGCCTGTCATGAAACCTGCAAC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 453634 520 - 135778131 TACCATCTAGCCTTCGCCTTGGCAGGGAGACAGGTGTTT-TGAGTAGAAACCCTTCGACTCAACGTGTCAAAC-------CGGTGCCTCAGCAGAGCTGTGcctggcctgccca-cctctcccctgccctgGGTTTTGGTCCAGAGTCT---------------------------------------------------------C---TCTCAGCAGAGCTATGCCTGGCCTGCCCACCTCTCCCTTGCCCTCGGTTTTGGTCCAGAGTGTATTTTAACTGTCTGATGTCTCTCTTGGTCAGTGTGAGTGAAACGCCACAGAAAAC--CAATTGCATCCTGTGGGGAAGCTGAAATCAATGCAACCAACAATTATATTAACAGTCTAGTTAAGAATAAAAAAACAATAGAACAGACGTGCCTTGGTGGAGGTTTATTTTCTATGGAGAAATAAACACAGTTGTTGCTTTTGGACTCCACTCTGTACAA-CACGGTAATGAAAGTGGAGTTGGGTGGTGACTAAAGAATTTGGATTCTTTCCTCCAGATTACAATGCTCGTTAAGGAGCAGCCTGTCATGACACCTGCGAC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 415412 460 + 190850796 tgtcatctAGCCTTCGCCTCAGCAGAAACACAGGTGTTT-TGAGTAAAAACACTGCAACTCCACACGTCCAACAAGGAGTCAGTGCCTCAGCAGGGCTGTGCTGGGCCCGCACACCCTC---------------------------------------------------------------------------------------T-------------------------------------CCCCTGTGCTCTGATTTGGTGGAGAGTCTATTTGAAATGCCTGACGTCTCTGTTGGTCAGTGTGATTGAAATGCCACAGAAAGC--CAATTGCATC---TGGGAAAGCTGAAAT-AAGGCAGCCAACCATTTTATTACCGGTCTAGTGAAGAATAAAAACATAACAGAACAGATGTGCCTTGGTGAATGTGTACTTTCTATGGAGAAATAAATATAATTGCTGCTTTTGGACTCTACTCTTGACAA-CAAGGTAACGAATCTGGAGTTAGATGACTACTAAAGAATTTGGATTCTTTCTTCCAGATTACAATGCTCATTAAGGGCCAGCACAAAACAAAATCTACAAT i calJac3.chr3 I 804 C 0 s canFam3.chr16 41765954 445 + 59632846 TCTCATC------TCACCTTAGCAGCAAGACAGGCATTTCTGAATAGAAATATCCAAGCTC-ACATATCAAAG----AGTTTATGCCTCAGCAGAACAGTGCCTGGTACACACACCCTC---------------------------------------------------------------------------------------T-------------------------------------CCTCTATTTCTAGTTTCTGTCTATGGTCTATATGGAACGTCTGGTAGCTCTCACCGCCAATGTAGTTGGAATATAGCAGAAAGCTGTGATTGGATCCTGTGGGGAAATTAAAACATAAGGAACCAACAATTATATTAACT----------GAATAAAAAAA-ATTAGAGCAGATGTGCCTTTGCAATTGTTTATATTTTATGGAGACACAAACCCAGTTCACATTCTCAGACTTC-TTTTGGACAATTAAGATTGTGGATTTGGAGTCAAGTGATGACTAAAGAATTTGAATGGTTTCTTTCAAGGTATAAAGCTCTTCAAGAGCCAGCATGTAATGAAATTTGTGAT i canFam3.chr16 C 0 C 0 e tupBel1.scaffold_4210.1-134973 13147 1962 + 134973 I e nomLeu3.chr7b 1397074 6586 - 115148730 T a score=359703.000000 s hg38.chrUn_KI270754v1 8801 123 + 40191 ATGTGC-TAGAACCAACTAAATGATTATTTTAAAAGTCACAGTCTGCATGGGGCTTCATAAATTCACGCCAGGGAGAGCTGTCTAATGGGATTGCCACCTTCCACCCCCAACGCAGACTTCAAA s panTro4.chr4_GL389869_random 36204 123 + 69473 ATGTGC-TAAAACCAACTAAGTGATTATTTTAAAAGTCACAGTCTGCATGGGGCTTCATAAATTCACACCAGGGAGAGCTGTCTAATGGGATTGCCACCTTCCACCCCCAACGCAGACTTCAAA i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19374595 123 + 23176937 ATGTGC-TAAAACCAACTAAGTGATTATTTTAAAAGTCACAGTCTGCATGGGGCTTCATAAATTCACACCAGGGAGAGCTGTCTAACGGGATTCCCACCTTCCACCCCCAACGCAGACTTCAAA i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1390488 123 - 115148730 ATGTAC-TAAAACCAACTAAGTGATTATTTTAAAAGTCGCAGTCTGCATGGGGCTTCATAAATTCACACCAGGGAGAGCTGTCTAACGGGATTCCCACCTTCCACCCCCAACGCAGACTTCAAA i nomLeu3.chr7b T 6586 C 0 s rheMac3.chr5 491609 122 - 184069350 GTGAGC-TAAAGCCAGCTAAGTTATGATTATAAAAGTCACAGTGTGCACGGGGCTTCATAAATTCACAGCAGTGAGAGCT-TCTAACAGGATTCCCACCCTCCACCCCCCGCATAGACTTCAGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 493350 122 - 189454096 GTGAGC-TAAAGCCAGCTAAGTTATGATTATAAAAGTCACAGTGTGCACGGGGCTTCATAAATTCACAGCAGTGAGAGCT-TCTAACAGGATTCCCACCCTCCACCCCCCGCATAGACTTCAGA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 390922 122 - 178775436 GTGAGC-TAAAGCCAGCTAAGTTATGATTATAAAAGTCACAGTGTGCACGGGGCTTCACAAATTCACAGCAGGGAGAGCT-TCTAACAGgattcccaccctccaccccccgCACAGACTTCAGA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 454154 122 - 135778131 GTGAGC-TAAAACCAGCTAAGTTATGATTATAAAAGTCACAGTGTGCACGGGGCTTCATAAATTCACACCAGGGAGAGCT-TCTAACAGGATTCCCACCCTCCACCCCCGGCGCAGACTTCAGA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 415872 122 + 190850796 GTGTGC-TGAAACCAGCTAGATAATGATTATGAAATTCACAGTCCGCATGGGGCATCACAAGTCCACACCACGGAGAGCTCACTACAGGGATTCCT-CCTTCCACCCACAAGGTAGACTTCGAA i calJac3.chr3 C 0 C 0 s canFam3.chr16 41766399 123 + 59632846 GTGAGCAAAAAACTAAATAAATGACTATTATAAAAGTCATAGTCTTCATGGGACTGCATAAATTCACACCATAGAGAGTTGTCTAAAGGGATTTGCACTACTC-CGCTCAACATAGACTTGAAA i canFam3.chr16 C 0 C 0 e tupBel1.scaffold_4210.1-134973 13147 1962 + 134973 I a score=5500.000000 s hg38.chrUn_KI270754v1 8924 1 + 40191 G s panTro4.chr4_GL389869_random 36327 1 + 69473 G i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19374718 1 + 23176937 G i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1390611 1 - 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 491731 1 - 184069350 G i rheMac3.chr5 C 0 C 0 s macFas5.chr5 493472 1 - 189454096 G i macFas5.chr5 C 0 C 0 s papAnu2.chr5 391044 1 - 178775436 G i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 454276 1 - 135778131 G i chlSab2.chr7 C 0 C 0 s calJac3.chr3 415994 1 + 190850796 G i calJac3.chr3 C 0 C 0 s tupBel1.scaffold_4210.1-134973 15109 1 + 134973 G i tupBel1.scaffold_4210.1-134973 I 1962 N 0 s canFam3.chr16 41766522 1 + 59632846 G i canFam3.chr16 C 0 I 1 a score=243660.000000 s hg38.chrUn_KI270754v1 8925 84 + 40191 CTCCTTGCTAGGTCT----CCACTCAAAGGCTTATCCCATGG-CCCGAGC-----AAGGAAGGCCTTTGTGTGT-GA-AAACACCT-GCCACCCAGC s panTro4.chr4_GL389869_random 36328 84 + 69473 CTCCTTGCTAGGTCT----CCACTCAAAGGCTTATCCCATGG-CCCGAGC-----AAGGAAGGCCTTTGTGTGT-GA-AAACACCT-GCCACCCAGC i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19374719 85 + 23176937 CTGCTTGCTAGGTCT----CCACTCAAAGGCTTATCCCGTGG-CCCGAGC-----AGGGAAGGCCTTTGTGTGT-GA-AAACACCTGGCCACCCAGC i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1390612 85 - 115148730 CTCCTTGCTAGGTCT----CCACTCAAAGGCTTAT-CCACGG-CCCCAGC-----AGGGAAGGCCTCTGTGTGTGGA-AAACACCTGGCCACCCAGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 491732 89 - 184069350 CTCCTTGCTGGGTCTGAAGCCACTCAGAGGCTTATCCCATGG-CCCGAGC-----AGGGAGGGCCTTTGGGTGT-TA-AAACACCTGGCCGCCCAGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 493473 85 - 189454096 CTCCTTGCTGGGTCT----CCACTCAGAGGCTTATCCCATGG-CCCGAGC-----AGGGAGGGCCTTTGGGTGT-TA-AAACACCTGGCTGCCCAGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 391045 85 - 178775436 CTCCTTGCTGGGTCT----CCACTCAGAGGCTTATCCCATGG-CCCGAGC-----AGGGAGAGCCTTTGTGTGT-TA-AAACACCTGGCCGCCCAGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 454277 86 - 135778131 CTCCTTGCTGGGTCT----CCACTCAGAGGCTTATCCCATGGCCCCAAGC-----AGGGAGGGCCTTTGTGTGT-TA-AAACACCCGGCCACCCAGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 415995 85 + 190850796 CTCCTTGCTGGGTCT----CCACTCAGAGGCTTACCCCACAA--CTGAGC-----AGGGAAGGCCTCTGTGGGT-TACAAGCACCCAGTCACCCAGC i calJac3.chr3 C 0 I 919 s canFam3.chr16 41766524 89 + 59632846 CCTCTTGCTTGGTCT----CCACTTGGCAGCCAATCCAGAGG-TCCTAGCCACAAGAAGACAGGCTGCATG-GT-TC-AAACACCTGGCCACCCACC i canFam3.chr16 I 1 C 0 a score=3276.000000 s hg38.chrUn_KI270754v1 9009 1 + 40191 T s panTro4.chr4_GL389869_random 36412 1 + 69473 T i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19374804 1 + 23176937 T i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1390697 1 - 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 491821 1 - 184069350 T i rheMac3.chr5 C 0 C 0 s macFas5.chr5 493558 1 - 189454096 T i macFas5.chr5 C 0 C 0 s papAnu2.chr5 391130 1 - 178775436 T i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 454363 1 - 135778131 T i chlSab2.chr7 C 0 C 0 s canFam3.chr16 41766613 1 + 59632846 T i canFam3.chr16 C 0 C 0 e calJac3.chr3 416080 919 + 190850796 I a score=3783361.000000 s hg38.chrUn_KI270754v1 9010 1182 + 40191 --TCAGGAGCACTGAGCGCTTTCGGCATGGCCGTCCCCA-CTGGCCCACATGGCA-TTTCTTACAGTGAGCTTGGTTTTTGACTGCATTGTTTTGCTTAACAAG---CTG----------TTTTTTTTCTACAGATGTAACCTTTTCCTGTGTTTCCTGACT-GGGACATCAGCCAGGTATTCTAGCCAACTTTGGTAGATATATATCATTGTTT-TTGTGCCAGGCTTGTTTTAAAAAATCTACCTATTGCTTGCCCTGATCAATCCATCA--CTACCCTTGAAAAGGTCATGGTTCTCTCATCAGGAAACTTTTCAAAAATCCTTGGCTGTGATTTATCTTATGTTATGGGCTCTGACAGTGATTCTCAGGAAGTGAGGCCCATTAGTTTCTTGTAAGGTCACTCCCCTGCTGTTGCATGCAGAGTGAGTATCAGTTGTGCTTGCCTGAGTTTGAAGCATCCTCTTGGGTGATTTCAA-GGGGGG-CAAAGGCAGGGCCATGACTGGTTTCTGTGTGGAGACTCACACGGGTGAGACAGGTGATCCATGGTGGAGAGGGAGGGTGTCTCTTGTAGGTGCTAGAGCCTCAAAGATAGCTCTTATTTTCAATCCTGCTTCTCCAAGATTCAGTTCACAAAGATAAGCATGCCTGGAAATATTTAATATTTTATCTTATTATATTCATATTCTGTGGTTGTTTAAAAATTCTTCAGTATGTTATAAACAAATGTTTCTGATTG--CCCATAAGCTTCGTAGGGACATT-AATTATTACTGACATGAGAAATTAAAGGCAGCCTGGATATTATTTTTAGGAATTACAGCATTTGAAAATCATATTCAGTGAATTTCAGAGAAATTATATCTATACTATTTAACACCGAGTAATGTTTAGTGAAAGGGTCAGACACTTTGGG-GTAAAAAGCGGCATTATGAAGTCAAATAATTTGTTTTCATGTTTAGGAAGACATTTTTAGGGATAT-AGTTTTGGTTATATGAATTCTTTGTGATAAGGGCAAAATCAGATATTATACAGGAAGCATTTATGATACCCATTCAATTGTAAGATCTCACTATTTTCCCATTCAATAATCTCAGCCACCTAAAATACGTCCAGTGTATATTTTCTGTTCTTTCTAGATATATCATCATTTCAAATGCTCATTTCAGCCATGATCATTTATTCCAGAAGCACTTGTTAGGACA s panTro4.chr4_GL389869_random 36413 1183 + 69473 --TCAGGAGCACTGAGTGCTTTCGGCATGGCCGTCCCCA-CTGGCCCACGCGGCA-TTTCTTACAGTGAGCTTGGTTTTTAACTGCATTGTTTTGCTTAACAAG---CTG--------TTTTTTTTTTCTACAGATGTAACCTTTTCCTGTGTTTCCTGACT-GGGACATCAGCCAGGTATTCTAGCCAACTTTGGTAGATATATATAATTGTTT-TTTTGCCAGGCTTGTTTTAAAAAATCTACCTATTTCTTGCCCTGATCAATCCA-CA--CTACCCTTGAAAAGGTCATGGTTCTCTCATCAGGAAACATTTCAAAAATCCTTGGCTGTGATTTATCTTATGTTATGGGCTCTGACAGTGATTCTCAGGAAGCGAGGCCCATTAGTTTCTTGTAAGGTCACTCCCCTGCTGTCGCATGCAGAGTGAGTATCAGTTGTGCTTGCCTGAGTTTGAAGCATCCTCTTGGGTGATTTCAA-GGGGGG-CAAAGGCAGGGCCATGACTGGTTTCTGTGTGGAGACTCACACAGGTGAGACAGGTGATCCACGGTGGAGAGGGAGTGTGTCTCTTGTAGGTGCTAGAGCCTCAAAGATAGCTCTTATTTTCAATCCTACTTCTCCAAGATTCAGTTCACAAAGTTAAGCATGCCTGGaaatatttaatattttatcttattatattCATATTCTGTGGTTGTTTAAAAATTCTTCAGTATGTTATAAACAAATGTTTCTGAATG--CCCATAAGCTTCGTAGGGACATT-AATTATTACTGACATGAGAAATTAAAGGCAGCCTAGATATTATTTTTAGGAATTACAGCATTTGAAAATCATATTCAGTGAATTTCAGAGAAATTATATCTATACTATTTAATATCAAGTAATGTTTAGTGAAAAGGTCAGACACTTTGGG-GTAAAAAGCGGCATTATGAAGTCAAATAATTTGTTTTCATGTTTAGGAAGACATTTTTAGGGAGAT-AGTTTTGGTTATATGAATTCTTTGTGATAAGGGCAAAATCAGATATTATACAGGAAGCATTTATGATACCCATTCAATTGTAAGATCTCACTATTTTCCCATTCAATAATCTCAGCCACCTAAAATACGTCCAGTGTATATTTTCTGTTCTTTCTAGATATATCATCATTTCAAATGCTCATTTCAGCCATGAtcatttattccagaagcacttgttaggaca i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19374805 1182 + 23176937 --TCAGGAGCACCGAGCGCTTTCAGCATGGCCATCCCCA-CTGGCCCACACGGCA-TTTCTTATAGTGAGCTTGGTTTTTAACTGCATTGTTTTGCTTAACAAG---CTG--------TTTTTTTTTTCTACAGATGTAACCTTTTCCTGTGTTTCCTGACT-GGGACACCAGCCGGGTATTCTAGCCAACTTTGGTATATATATATAATTGTTT-TTTTGCCAGACTTGTTTTAAAAAATCTACCTATTGCTTGCCCTGATCAATCCATCA--CTACCCTTGAAAAGGTCGTGGTTCTCTCATCAGGAAACTTTTCAAAAATCCTTGGCTGTGATTTATCTTATGTTACGGGCTCTGAC--TGATTCTCAGGAAGCGAGGCCCATTAGTTTCTTGTAAGGTCATTCCCCTGCTGTCGCATGCAGAGTGAGTATCAGTTGTGCTTGCCTGAGTTTGAAGCATCTTCTCGTGTGATTTCAA-GGTGGG-CGAAGGCAGGGCCATGACTGGTTTCTGTGTGGAGACTCACACGGGTGAGACAGGTGATCCATGGGGGAGAGGGAGGGTGTTTCTTGTAGGTGCTAGAGCCTCAAAGATAGCTTTTATGTTCAATCCTGCTTCTCCGAGATTCAGTTCACAAAGATAAGCATGCCTCGaaatatttaatattttatcttattatattCATATTCTGTGGTTGTTTAAAAATTCTTTAGTATGTTATAAACAAATGTTTCTGATTC--CCCGTAAGCTTCATAGGGACATT-AATTATTACTGACATGAGAAATTAAAGGCAGCCTAGATATTATTTTTAGAAATTACAGCATTTGAGAATCATATTCAGTGAATTTCAGAGAAATTATATCTATACTATTTAATACCGAGTAATGTTTAGTGAAAGGGCCAGACACTTTGGG-GTAAAAAGCGGCATTATGAAGTCAAATAATTTGTTTTCATGTTTAGGAAGACATTTTTAGGGAGAT-AGTTTTGGTTATATGAATTCTCTGTGATAAGGGCAAAACCAGATATTATACAGGCAGCATTTATGATACCCATTCAATTGTAAGATCTCACTATTTTCCCATTCAATAATCTCAGCCACCTAAAATACATCCAGTGTATGTTTTCTGTTCTTTCTAGATACATTGTCATTTCAAATGCTCATTTCAGCCACGATCATTTATTCCAGAAGCACTTGTTAGGaca i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1390698 1191 - 115148730 --CCTGGAGCACTGAGCGCTTTCCCAGTGGCCGTCCCCA-CTGG-CCACACGGTG-TATCGTACAGTGAGCTTGGGTTTTAACCGCATTGTTTTGCTTAACAAG---CTGGtttttttttttttttttCTACAGATGTAACCTTTCCCTGTGTTTCCTGACT-GGGACACCAGCCGGGTATTCTAGCCAACTTTGGTAGATACATATCATTGTTT-CTTTGCCAGGCTTGTTTTAAAAAATCTACCTATTGCTTGCCCTGATCAATCCATCA--CTACTCTTGAAAAGGTCGTGGTTCTCTCATCAGGAAACTTTTCAAAAATCCTTGGCTGTGATTTGTCTTATGTTACGGGCTCTGACAGTGATTCTCAGGAAGGGAGGCCCATTAGTTTATTGTAAGGTCATTCCCCTGCTGTCGCATGCAGAGTGAGCATCAGTCATGCCTGCCTGAGTTTGAAGCATCCTCTCGGGTGATCTCAAGGGGGGG-CGAAGGCAGGGCCATGACTGGTTTCTGTGTGGAGACTCACACGGGTGAGACAGGTGATCCACGGGGGAGAGGGAGGGTGTCTCTCGTAGGTGCTAGAGCCTCAGAGACAGCTCTTATGTTCAATCCTGCTTCTCCAAGATTCAGTTCACAAAGATAAGCATGCCTTGAAATATTTAATA-TTTATCTTATTATATTCATATTCTGTGGTTGTTTAAAAATTCTTTAGTATATTATAAACAAATGTTTCTGATTC--CCCATAAGCTTCCTAGGGACATT-AATTATTACTGACATGAGAAATTAAAGGCAGCCTAGATATTATTTTTAGTAATTACAGCATTTGAAAATCATATTCAGTGAATTTCAGAGAAATTGTATCTATGCTATTTAATACCGAGTAATGTTTAGTGAAAGGGCCAGATGCTTTGGG-GTGAAAAGCGGCATTATGAAGTCAAATAATTTGTTTTCAGGTTTAGGAAGACATTTTTAGGGAGAT-AGTTTTGGTTACATGAATTCTCTGTGATAAGGGCAAAATCAGATATTATATAGGCAGCATTTATGATACCCATTCAATTGTAAGATCTCACTATTTTCCCATTCAATAATCTCAGCCACCTAAAATACGTCCAGTGTATATTTTCTGTTCTTTCTAGATATATTGTCATTTCAAATGCTCATTTCAGCCACGAtcatttattccagaagcacttgttaggaca i nomLeu3.chr7b C 0 I 6945 s rheMac3.chr5 491822 1166 - 184069350 --TCAGGAACACCAAGCACTTTCGACATGACAGTCCCCT-CTGGCCCACACGGCA-TTTCTTACAGTGAGCTTGGTTTTTAACTGCATCGTTTTGCGTAACAAG------------TTTTTTTTTTCCCTACAGATGTAACCTTTTCCTGTGTTTCCTGACT-GGGACACCAGCCGGGTATTCTAGCTAACTTTGGTAGATATATATCACTGTTTCTTTTGCTAGCCTTGTTTTAAAAAATCTACATGTTGCTTGCCCTGATCAATCCATCA--CTACCCTTGAAAAGGTCATGGTTCTCTCATCAGGAAACTTTTCAAAAATCCTTGGCTGTTATTTATCTTATGTTACAGGCTCTGACAGTGATTCTCCTGAAGCGAGGCCCATTAGTTTCTTGTAAGGTCATTCCCCTGCTGTTGCATGCAGAGTGAGTGTCAGTTATGCTTGCCTGAGTTGGAAGCATCCTCTCGGGTGATTTCAA-GGGGGG-CGAAGGCAGGGCCATGACTGGTTTCTGTGT-GAGACTCACTTGGGTTAGACAGGTGGTCCACGGGGGAGAGGGAGGGCGTCCCTTGTAGGTGCTGGAGCCTCAGAGATAGCTCTTATGTTCAATCCTGCTTCTCCAAGATCCAGTTCACAAAGATAACCATGCCTTGaaatatttaatattttatcttattatatCCATATTCTGTGGTTGTTT--AAATTCTTCAGTATGTTATAAACAAATGTATCTGATTC--CCTATAAGCTTTGTAGGGACATT-ACTTATTACTGACATGAGGAATTAAAGGCAGCCTAGATATTATTTTTAGAAATTACAGCATTTGAAAATCATACTCAGTGAATTTCAGAGAAATTATATCTATCCTATTTAATACTCAGTAATGTTTAGTGAAAGGGTCAGACACTTTGGG-GTGAAAAGTGGCATTATAAAGTCAAATAATTTGTTTTCATGTTTAGGAAGACATTTTGAGGGAGAT-AGTTTTGATTATATGAATTCTCTGTGATAAGGGCAAAATCAGGTGTTATATAGGAAGCGTTTATGACACCCACACAATTGTAAAATCTCACTGTTTTCCCATTCAATAATCTCAGCCACCTAAAATATGTCCAGTGTATATTTTCTGTTTTTTCTAGATATATTGTCATTTCAAATGC---------------TCATTTATTCCAGAGGCACCTGTTAGGACA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 493559 1165 - 189454096 --TCAGGAACACCGAGCACTTTCGACATGACAGTCCCCT-CTGGCCCACACGGCA-TTTCTTACAGTGAGCTTGGTTTTTAACTGCATCGTTTTGCGTAACAAG-------------TTTTTTTTTCCCTACAGATGTAACCTTTTCCTGTGTTTCCTGACT-GGGACACCAGCCGGGTATTCTAGCTAACTTTGGTAGATATATATCACTGTTTCTTTTGCTAGCCTTGTTTTAAAAAATCTACATGTTGCTTGCCCTGATCAATCCATCA--CTACCCTTGAAAAGGTCATGGTTCTCTCATCAGGAAACTTTTCAAAAATCCTTGGCTGTTATTTATCTTATGTTACAGGCTCTGACAGTGATTCTCCTGAAGCGAGGCCCATTAGTTTCTTGTAAGGTCATTCCCCTGCTGTCGCATGCAGAGTGAGTGTCAGTTATGCTTGCCTGAGTTGGAAGCATCCTCTCGGGTGATTTCAA-GGGGGG-CGAAGGCAGGGCCATGACTGGTTTCTGTGT-GAGACTCACTTGGGTTAGACAGGTGGTCCACGGGGGAGAGGGAGGGCGTCCCTTGTAGGTGCTGGAGCCTCAGAGATAGCTCTTATGTTCAATCCTGCTTCTCCAAGATCCAGTTCACAAAGATAACCATGCCTTGAAATATTTAATATTTTATCTTATTATATCCATATTCTGTGGTTGTTT--AAATTCTTCAGTAAGTTATAAACAAATGTATCTGATTC--CCTATAAGCTTTGTAGGGACATT-ACTTATTACTGACATGAGGAATTAAAGGCAGCCTAGATATTATTTTTAGAAATTACAGCATTTGAAAATCATACTCAGTGAATTTCAGAGAAATTATATCTATCCTATTTAATACTCAGTAATGTTTAGTGAAAGGGTCAGACACTTTGGG-GTGAAAAGTGGCATTATAAAGTCAAATAATTTGTTTTCATGTTTAGGAAGACATTTTGAGGGAGAT-AGTTTTGATTATATGAATTCTCTGTGATAAGGGCAAAATCAGATGTTATATAGGAAGCGTTTATGATACCCACACAATTGTAAAATCTCACTGTTTTCCCATTCAATAATCTCAGCCACCTAAAATATGTCCAGTGTATATTTTCTGTTTTTTCTAGATATATTGTCATTTCAAATGC---------------TCATTTATACCAGAGGCACCTGTTAGGACA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 391131 1176 - 178775436 --TCAGGAACACCGAGCACTTTCGACATGACAGTCCCCT-CTGGCCCACACGGCA-TTTCTTACAGTGAGCTTGGTTTTTAACTGCATCGTTTCACGtaacaag---ttt-tgttttttttttttttcctacagatgtAACCTTTTCCTGTGTTTCCTGACT-GGGACACCAGCCGGGTATTCTAGCTAACTTTGGTAGATATATATCACTGTTtcttttgctagccttgttttaaaaaatctacatgtTGCTTGCCCTGATCAATCCATCA--CTACCCTTGAAAAGGTCATGGTTCTCTCATCAGGAAACTTTTCAAAAATCCTTGGCTGTGATTTATCTTATGTTACAGGCTCTGACAGTGATTCTCCGGAAGCGAGGCCCATTAGTTTCTTGTAAGGTCATTCCCCTGCTGTCGCATGCAGAGTGAGTGTCAGTTATGCGTGCCTGAGTTGGAAGCATCCTCTCGGGTGATTTCAA-GGGGGG-CAAAGGCAGGGCCATGACTGGTTTCTGTGT-GAGACTCACTCGGGTTAGACAGGTGATCcatgggggagagggagggcgTCCCTTGTAGGTGGTGGAGCCTCAGAGGTAACTCTGATGTTCAATCCTCCTTGTCCAAGATTCAGTTCACAAAGATAACCATgccttgaaatatttaatattttatcttactATATCCATATTCTGTGGttgtttaaaaattcttcagTATGTTATAAACAAATATATCTGATTC--CCTGTAAGCTTCATAGGGACATT-AATTATTACTGACATGAGGAATTAAAGGCAGCCTAGatattatttttggaaattacAGCATTTGAAAATCTTATTCAGTGAATTTCAGAGAAATTATATCTATCCTATTTAATACTCAGTAATGTTTAGTGAAAGGGTCAGACACTTTGGG-GTGAAAAGTGGCATTATGAagtcaaataatttgttttcatgtttaggAAGACATTTGGAGGGAGAT-AGTTTTGATTATATGAATTCTCTGTGATAAGGGCAAAATCAGATGTTATATAGGAAGCGTTTATGATACTCACACAATTGTAAAATCTCACTGTTTTCCCATTCAATAATCTCAGCCACCTAAAATATGTCCAgtgtatattttctgttttttctagaTATATTGTCATTTCAAATGC---------------TCATTTATTCCAGAGGCACCTGTTAGGACA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 454364 1175 - 135778131 --TCAGGAACACCGAGCACTTTCGACATGACAGTCCCCT-CTGGCCCACATGGCA-TTTCTTACAGTGAGCTTGGTTTTTAACTGCATCGTTTTGCGTAACAAGtttttt-ttttttgtttttttttCCTACAGATGTAACCTTTTCCTGTGTTTCCTGACT-GGGACACCAGCTGGGTATTCTAGCTAACTTTGGTAGATACATATCACTGTTTCTTTTGCTAGCCTTGTTTTAAAAAATCTACATGTTGCTTGCCCTGATCAATCCATCA--CTACCCTTGAAAAGGTCATGGTTCTCTCATCAGGAAACTTTTCAAAAATCCTTGGCTGTGGTTTATCTTATGTTACAGGCTCTGACAGTGATTCTCCGGGAGCGAGGCCCATTAGTTTCTTGTAAGGTCATTCCCCTGCTGTCGCATGCAGAGTGAGTGTCAGTTATGCTTGCCTGAGTTGGAAGCATCCTCTCGGGTGATTTCAA-GGGGAG-CGAAGGCAGGGCCATGACTGGTTTCTGTGT-GAGACTCACTCGGGTTAGACAGGTGATCCATGGGGGAGAGGGAGGGCGTCCCTCGTAGGTGCTGGAGCCTCAGAGATAACTCTGATGTTCAATCCTCTTTCTCCAAGATTCAGTTCACAAAGATAACCATGCCTTGAAATATTTAATATTTTATCTTATTATATCCATATTCTGTGGTTGTTTAAAAATTCTTCAGTATGTTATAAACAAATGTATCTGATTC--CCTGTAAGCTTCGTAGGGACATT-AATTATTACTGACATGAGGAATTAAAGGCAGCCTAGATATTATTTTTAGAAATTACAGCATTTGAAAATCATATTCAGTGAATTTCAGAGAAATTA----TATCCTATTTAATACTCAGTAATGTTGAGTGAAAGGGTCAGACACTTTGGG-GTGAAAAGTGGCATTATGAAGTCAAATAATTTGTTTTCATGTTTAGGAAGACATTTGGAGGGAGAT-AGTTTTGATTATATGAATTCTCTGTGATAAGGGCAAAATCAGATGTTATATAGGAAGCGTTTTTGATACCCACACAATTGTAAAATCTCACTGTTTTCCAATTCAATAATCTCAGCCACCTAAAATATGTCCAGTGTATATTTTCTGTTTTTTCTAGATATATTGTCATTTCAAATGC---------------TCATTTATTCCAGAGGCACCTGTTAGGACA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 416999 1174 + 190850796 --TCAGGGACACTGAGCACTTTCG---TGGCAGTCTACA-ATGACCCACACAGCA-TTTCTTACAGTGAGCTTGGTCTTTAGCTGCATTGTTTTGTTTAACAAA---CTC---------TTTTTTTTTCTGCAGATGC-TCCTTTTCCTGTGTTTCCCGACT-AGGATGCCAGCCGAGTATTCTAGCTAACTTTGGTAGATATATATCATTGTTT--TTTGCCAGCCTTGTTTTAAAAAATCTACATATGGCTTGCCCTGATCAATCCATCA--CTACGCTTGAAAAGGTCATGGTTCTGTCTTCAGGAAGCCTTTGAAAAATCCTGGGCTATGATTTATCTTATGTTACATGCTCTGACAGAGATTCTCAGGAAGCGAGGCCCATTAGTTTCTTGTAAGGTCATTCCCCTGCTGTCGCAGGAAGAATGAGCATCCGTTGAGCTTG-CTGAGTTTGCACCATCCTCTCGGGTGATTTAAA-GGGAGGTCGGAGGCATGACCATGACAGGTTTCTGTGTGGAAACTCACACGGGTTAGACAGGTGGTCTGCACGGGAGAAGGAGACTGTCCCTTGTAGGTGCTAGAATGTCAAACACAGCTCTTCTGCTCAATGCTGCTCCTCCAATATTGAGTTCACAAAGATAAGCATGCCTTGAAATATTTAATATTTTATCATATGATATTCATAATCGGTGGTTGTTT-AAAATTCTTCAGTATGTTATAAGCAAATGTTTCTGATTA--ACCCTAAGCTTCGTAGGGACATTAAATCATTACTGACATGAGAAATTAAAGGCAACCTAGATATTA-TTTTAAAAATTACAGCATTTGTAAATCACATTCAGTGAATTTCAGAGAAATTAT-TCTATACTATTTAATACCAAGTAATGTTGAGTGGAAGAGCCACA-AGTTTGGG-GTAAAAAGTGGCATTATGAAGTCAAATAATTTGTTTTCATGTCTAGAAAGACCTTTTGAGGGAGAT-AGTTTTGGTTATATGAATTCTCTGTGAT-AGGGCAAAACTAAATGTTATATAGGAAGCAGTTATGACACCCGTTCAATTGTAAAATCTCACTATTTTCCCATTCAATAATCTCAGCCACCTAAAATATGTCCAGTGTCTATTTTCTGTTCTTTCTAGCGATATTGTCACTACAAATGTTCATGTCAGCCAAGATCATTTATTCCAGAAGCGCTTGCCAGGATG i calJac3.chr3 I 919 C 0 s canFam3.chr16 41766614 1130 + 59632846 TTCCAGGAACATGGAGGACTTTTGATGTGGTGATTAAGACCTGGCTCATATAACATTTTCTTATGGTGAACTTGA-TTTTAGCTTCATT-TCTTGCTTAACCAG---CTC---------TTTTGTTTCAGACGGATGTAACCTTTCCTTTTGCTTCCCAACTAAGGACAT--GTGAGGTATTCCAGATAACTTTTGTAGATCC--ATCATTGGTT-TCTTGGCAGCCTTGTTTTTAAAAATCTACATATTGCTTTTCTGGTTCAATCCATCACTCTACACTTGAAAAGGTCATGGTTTGCTCATCAGGAAACTTTGGAGAAATCTTTTGCTATGATTTATCTTATGTTACATGCCCTGATAGAGATTCTCAGGAAGCAAGGCCCATTAGTTCCTTGTAAGGTCATTCCCCTAAAGTCCAGCACAAAATGAGTACCAATTGTGCATGCTTGAGATTGAAGCATTCTCGTGGATCATTTAAA-GGGAAT-CAAGGG------AATAAGTGGTTTCTACGTGGTGACTCATATGAGTTAGACAGGTGATGTATGGGACAGAG-----TCTCCCTTTGGAAGTGCTAGCATGTTAATGATAGCTCCTATTTTTAAATC---TCCTCTAATATTTAGT--------ATAAACATGCCCtaaaatatttaatattttattttCTGATATTCATAACCTATGGTTGTTT-AAAACCCTTTGGTATGTTATAAGCAAATATCTGTCCTTTGACCCCTGAGCTTC-----------------TTACTAACATGAGAAATTAAAGCATGCCTATTTATTATATTTTAAAATCACAGTATTTGAAAGTAATAATCAGTGACTTTCCAAGTAATTATATCTGCAGTATTTAACACTGGACTGTATTTAGTAGAATGGCCTGGCAGTTTGGGAGAAAAAGGTAACACTATGAAGTCAAATAACCTGTTTTCATATCTGGGAAGACATTTTGAGTGAGACAAGTTTTAGTTATAGAATGTCTGTGTTGTAAGGACCAAATCAGATA--GAATAGAAAGCATTTATGATACACATTCAGTTATAAAACCTCATTATTTCCCCATTT-TTAATCTTAACCACCTAAAATATGTCAAGTGTGTATCTACCATTCTCTCTAAATATATTCTTACTTC-AATGTTAATTTCAGCCAAGATCACTTATCTAAGAa--------------- i canFam3.chr16 C 0 C 0 a score=604445.000000 s hg38.chrUn_KI270754v1 10192 206 + 40191 TTATACTTATTTCCTTTAAGTATAAGGTCCTGTGTTGACTACTGAGAATGAAAAACTGAACAAGACAGAAAGTCCCACCTTGAAG-----AGCTTCCAAGTGTAGCGAGTCTCCTGGCATCAGGTATGGCTGGTATCATGGAAACACTCGGCTGACTGTCCAGGAGATGCTGGTTAAGAGGTGGAAGGTGATGGCGTGAAATCAAGTTCAG s panTro4.chr4_GL389869_random 37596 206 + 69473 ttatacttatttcctttaagtataaggtcctgtgttgactactgagaatgaaaaactgaacaagacagaaagtcccaccttgaag-----agcttccaagtgtagcgagTCTCCTGGCATCAGGTATGGCTGGTATCATGGAAACACTCGGCTGACTGTCCAGGAGATGCTGGTTAAGAGGCGGAAGGTGATGGCGTGAAATCAAGTTCAG i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19375987 206 + 23176937 ttatacttattacctttaagtataaggtcctgtgttgactactgagaatgaaatactgaacaagacagaaagtcccaccttgaag-----agcttccaagtgtagtgagTCTCCTGGCATCAGGTATGGCTGGTACCATGGAAACCCTCGGCTGACTGTCCAGGAGATGCTGGTTAAGAGGCGGAAGGCAATGGGGTGAAATCAAGTTCAG i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1398834 206 - 115148730 TTATACTTATGTCCTTTAAgtataaggttgtgtgttgactactgagaatgaaacactgaacaagacagaaagtccaaccttgaag-----agcttccaagtgtagtgagTCTCCTGGCATCAGGTATGGCTGGTACCATGGAAACACTCGGCTGACTGTCCAGGAAAAGCTGGCTAAGAGGCTGAAGGCGATGGCATGAAATCAAGTTCAG i nomLeu3.chr7b I 6945 C 0 s rheMac3.chr5 492988 205 - 184069350 TTGCACTTATTTCCTTTCAGTATAaggtcctgtgttgactactgagaatgaagccctgaagaagacagaaagtcccaccttgaag-----agcttccaagtgtagtgagTCTCCTGGCATCAGGTATGGCTGGTACCGTGGAAACGCTTGACTGACTGTGCAGGAGACGCTGGGTAGGAGGCAGAAGGCGAAGGCA-GAAATCAAGTTCAG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 494724 205 - 189454096 TTGCACTTATTTCCTTTCAGTATAAGGTCCTGTGTTGACTACTGAGAATGAAGCCCTGAAGAAGACAGAAAGTCCCACCTTGAAG-----AGCTTCCAAGTGTAGTGAGTCTCCTGGCATCAGGTATGGCTGGTACCGTGGAAACGCTTGACTGACTGTGCAGGAGACGCTGGGTAGGAGGCAGAAGGCGAAGGCA-GAAATCGAATTCAG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 392307 205 - 178775436 TTGCACTTATTTCCTTTCAGTATAAGGTCCTGTGTTGACTACTGAGAATGAAGcactgaagaagacagaaagtcCCACCTTGAAG-----AGCTTCCAAGTGTAGTGAGTCTCCTGGCATCAGGTATGGCTGGTACCGTGGAAACGCTTGACTGACTGTGCAGGAGACGCTGGGTAAGAGGCAGAAGGCGATGGCA-GAAATCGAGTTCAG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 455539 205 - 135778131 TTGCACTTATTTCCTTTCAGTATAAGGTCCTGTGTTGACTACTGAGAATGAAACACTGAAGAAGACAGAAAGTCCCACCTTGAAG-----AGCTTCCAAGTGTAGTGAGTCTCCTGGCATCAGGTATGGCTGGTACCGTGGAAACGCTTGACCGACTGTGCAGGAGACGCTGGGTAGGAGGTAGAAGGCGATGGCA-GAAATCGAGTTCAG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 418173 170 + 190850796 ------TTA------------------------------TACTGAGAAGGAAACACGGAACAAGACAGAAAGTCCCACCCTGAAG-----AGTTTCCAAGTGTAGTGAGCCTCCTGGCATTAGGTGTGGCTGGTACCGTGGATACACTCGGCCGACTGTCCAGGAGAAGTCAGTTCAGAGGCAGAAGGTGATTGCATGAAAGCAAGTTCAG i calJac3.chr3 C 0 C 0 s canFam3.chr16 41767744 183 + 59632846 ---------------ctatgtataaggccctac-ttgattgctgggaatgtaacactgaacaagatagaaaattctacccctggacttgcCGCATCCATGTA-AGTGAGTCTTCTGGCATTAAGTTCTGCTGGCAG-ATGGAAACCTCTGGTTGACTATAGAGGAAAAGCT----------TCTAAGGTAACAGTATAAAATCAAGTTCAG i canFam3.chr16 C 0 C 0 a score=15032.000000 s hg38.chrUn_KI270754v1 10398 4 + 40191 GTTC s panTro4.chr4_GL389869_random 37802 4 + 69473 GTTC i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19376193 4 + 23176937 GTGC i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1399040 4 - 115148730 GTGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 493193 4 - 184069350 GTGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 494929 4 - 189454096 GTGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 392512 4 - 178775436 GTGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 455744 4 - 135778131 GTGC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 418343 4 + 190850796 GTGC i calJac3.chr3 C 0 C 0 s tupBel1.scaffold_122946.1-80429 41146 4 + 80429 GTTC i tupBel1.scaffold_122946.1-80429 N 0 N 0 s canFam3.chr16 41767927 4 + 59632846 GTGT i canFam3.chr16 C 0 C 0 a score=63325.000000 s hg38.chrUn_KI270754v1 10402 20 + 40191 AGGGGACACTCCTGAGAGCA s panTro4.chr4_GL389869_random 37806 20 + 69473 AGGGGACACTCCTGAGAGCA i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19376197 20 + 23176937 AGGGGACACTCCTGAGAGCG i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1399044 20 - 115148730 AGGGGACACTCCTGAGAGCG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 493197 20 - 184069350 AGGGGACACTCCTGAGAGCA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 494933 20 - 189454096 AGGGGACACTCCTAAGAGCA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 392516 20 - 178775436 AGGGGACACTCCTGAGAGCA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 455748 20 - 135778131 AGGGGACACTCCTGAGAGCA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 418347 20 + 190850796 ATGGGATACTCCTGAGAATG i calJac3.chr3 C 0 C 0 s canFam3.chr16 41767931 19 + 59632846 GTGTGATA-TCTTGAGTACA i canFam3.chr16 C 0 C 0 a score=5005.000000 s hg38.chrUn_KI270754v1 10422 1 + 40191 T s panTro4.chr4_GL389869_random 37826 1 + 69473 T i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19376217 1 + 23176937 T i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1399064 1 - 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 493217 1 - 184069350 T i rheMac3.chr5 C 0 C 0 s macFas5.chr5 494953 1 - 189454096 T i macFas5.chr5 C 0 C 0 s papAnu2.chr5 392536 1 - 178775436 T i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 455768 1 - 135778131 T i chlSab2.chr7 C 0 C 0 s calJac3.chr3 418367 1 + 190850796 T i calJac3.chr3 C 0 C 0 s tarSyr2.KE950006v1 466718 1 + 496798 T i tarSyr2.KE950006v1 N 0 N 0 s canFam3.chr16 41767950 1 + 59632846 T i canFam3.chr16 C 0 C 0 a score=1043035.000000 s hg38.chrUn_KI270754v1 10423 352 + 40191 TCCTGCCCTGTCCCTGTGGCCTGAGCGGCCTTCTCAGTTGCACAGGTAGGTTTTCTCTGCTCTGCACTCCCTCTGTCCCAAGGTACCCTTTAGCAAA--GTGTAAATTTGTAAGAGTGGTTAGCCCTGGACTTTATCTCAAGTCTGTAATAAGGGCACCTACACTAAG-ACTGAAACTGGAACATG-CTATTGGTGATCAAACCATCAGTGTTAATAAGTCACTTAAGTTACATTTATGGACTGGAGAAAGAAATGGAAGAAAATCAGAGTACAAATAATA-AATGGTTACCAGGTCCCTAGATCTGA-AAGGGCGAATACATTCATGCAGTAGGTGTCC---AGGATACTCATGTGGTCC s panTro4.chr4_GL389869_random 37827 352 + 69473 TCCTGCCCTGTCCCCGTGGCCTGAGTGGCCTTCTCAGTTGCACAGGTAGGTTTTCTCTGCTCTGCACTCCCTCTGTCCCAAGGTACCCTTTAGCAAA--GTGTAAATTTGTAAGAGTGGTTAGCCCTGGACTTTATCTCAAGTCTGTAATAAGGGCACCTACACTAAG-AATGAAACTGGAACTTG-CTATTGGTGATCAAACCATCAGTGTTAATAAGTCACTTAAGTTACATTTATGGACTGGAGAAAGAAATGGAAGAAAATCAGAGTACAAATAATA-AATGGTTACCAGGTCCCTAGACCTGA-AAGGGCGAATACATTCATGCAGTAGGTGTCC---AGGATACTCATGTGGTCC i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19376218 352 + 23176937 TCCTGCCCTGTCCCTGTGGCCTGAGTGGCCTTCTCAGTTGCACAGGCCGGTTTTCTCTGCTCTGCACTCCCTCTTTCCCAAGGTACCCTTTAGCAAA--GTGTAAATTTGTAAGAGTGGTTAGCCCTGGACTTTATCTCAAGTCTGTAGTAAGGGCACCAACACTAAG-ACTGAAACTAGAACTTG-CTATTGATGATCAAACTATCAGTGTTAATAAGTCACATAAGTTACATTTATGGACTGGGGAAAGAAATGGAAGAAAATCAGAGTACAAATAATA-AATGGTTACCAGGTCCCTAGACCTGA-AAGGGCTAATACATTCATGCAGTAGGTGTCC---AGGATCCTCATGTGGTCC i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1399065 351 - 115148730 TCCTGCCCTGTCCCCGTGGCCTGAGCAGCCTTCTCAATTGCACAGGTAGGTTTTCTCTGC-CTGTGCTCCCTCTCTCCCAAGGTACCCTTTAGCAAA--GTGTAAATCTGTAAGAGCGGTTAGCCCTGGACTTTATCTCAAGTCTGTAGTGAGGGCACCAACACTAGG-ACTGAAACTAGAACTTT-CTGTTGGTGATCAAACCATCAGTGTGAATAAGTCACATAAATTACATTTATGGACTGGAGAAAGAAATGGAAGAAAATCAGAGTACAAGTAATA-AATGGTTACCAGGTCCCTAGACCTGA-AAGGGCTAACACATTCATGCAGTAGGTGTCC---GGGATCCTCATGTGGTCC i nomLeu3.chr7b C 0 I 136 s rheMac3.chr5 493218 349 - 184069350 TCCTGCTCTGTCCCCGTGGCCTGAGTGGCCTTGTCAGTTGCACAGGTAGGTTTTCTCTGCTCTGCACTCCCTCTCTCCCAAGGCACCCTTTAGAAAC--GTGTAAATTTGTAAGGGTGGTTAGCCCTTGACTTTATCCCATGTCTGCAGTAGGGGGACCAACACTAGG-CCTGAAACTAGAGCTTA-CTATTGTTGATCAAACTGTCAGGGTTAATAAGTCACCTAAGTTACACTTATGGACTGGGGAAAGAAGTGGAAGAAAGTCAGAGTATAAGTAATG-AAGGGTTACCAGGTCCCTAGACCTGA-AAGGGCTAATACATTCATGCAGTAGGTGTCC---GGGATCCTCACGTGG--- i rheMac3.chr5 C 0 C 0 s macFas5.chr5 494954 349 - 189454096 TCCTGCTCTGTCCCCGTGACCTGAGTGGCCTTGTCAGTTGCACAGGTAGGTTTTCTCTGCTCTGCACTCCCTCTCTCCCAAGGCACCCTTTAGAAAC--GTGTAAATTTGTAAGGGTGGTTAGCCCTTGACTTTATCCCATGTCTGCAGTAGGGGGACCAACACTAGG-CCTGAAACTAGAGCTTA-CTATTGTTGATCAAACCGTCAGGGTTAATAAGTCACCTAAGTTACATTTATGGACTGGGGAAAGAAGTGGAAGAAAGTCAGAGTATAAGTAATG-AAGGGTTACCAGGTCCCTAGACCTGA-AAGGGCTAATACATTCATGCAGTAGGTGTCC---GGGATCCTCACGTGG--- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 392537 349 - 178775436 TCCTGCTCTGTCCCTGTGGCCTGAGTGGCCTTGTTAGTTGCACAGGTAGGTTTTCTCTGCTCTGCACTCCCTCTCTCCCAAGGCACCCTTTAGAAAC--ATGTAAATTTGTAAGGGTGGTTAGCCCTTGACTTTATCCCATGTCTGCAGTAGGGGCACCAACACTAGG-ACTGAAACTAGAGCTTA-CTATTGTTGATCAAACCGTCAGGGTTAATAAGTCACATAAGTTACATTTATGGACTGGGGAAAGAAGTGGAAGAAAGTCAGAGTACAAGTAATG-AAGGGTTACCAGGTCCCTAGACCTGA-AAGGGCTAATACATTCATGCAGTAGGTGTCC---GGGATCCTCACGTGG--- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 455769 346 - 135778131 TCCTGCTCTGTCCCCGTGGCCTGAGTGGCCTTGTCAGTTGCACAGGTAGGTTTTCTCTGCTCTGCACTCCCTCTCTCCCAAGGCACCCTTTAGAAAA--GTGTAAATTTGTAAGGGTGGTTAGCCCTTGACTTTATCCCATGTCTGC---ATGGGCACCAACACTAGG-ACTGAAACTAGAGCTTA-CTATTGTTGATCAAACCGTCAGGGTTAATAAGTCACATAAGTTACATTTATGGACTGGGGAAAGAAGTGGAAGAAAGTCAGAGTACAAGTAATG-AAGGGTTACCAGGTCCCTAGACCTGA-AAGGGCTAATACATTCATGCAGTAGGTGTCC---GGGATCCTCATGTGG--- i chlSab2.chr7 C 0 C 0 s calJac3.chr3 418368 327 + 190850796 CCCCTCGCTGTCCCCGTAGCCCGAGTGACCTTCTCAGCTGCACAGATAGGTTGTTTCTGCTCTGCACTCCCTCTCTCCCAA-GTACCTTTTAGCAAA--GTGTAAATTTGTAAGGGTGAATAACCCTTGATTTTGTCTCAAGTCAGTAGTATGGGCACCAACGCCAGG-ACTGAAACTAGAACTTG-CTACTGGTGAGCAAACCCTCAGTGTTAATAAGTCACATAAATTACATTTAAGGACTAGGGAAGTAAATGGAAGACAATCAGAATA-AAGTAACACGAGGCTTACCAGGTCC----------------------------TGCAGTAGGTGTCCTCAGGGACCCTCACGTGGTCT i calJac3.chr3 C 0 C 0 s canFam3.chr16 41767951 338 + 59632846 TCCTGCTCTGGCCTTGTGTCCTGAGCAGTTTTTCTATTTGCACAGGTTGATTTGTCCTGCTCTCTATAGACTCTGTCTCCAAGTCCCACTTGACACAGGGTGTGAAGTTGTGAGGCTTG-TAGCACTTCACTCCATCTCAAATCTGTAGTAA-GGCCCCAACACAAGGAACTAGAACTGGACCTTGACTATTGG-GCTCAAACCATCTGTGTCAATAAGCCACATAAATTACACTGAAGGACTGAGGAAAGAAATGGAAGGGAA------------------GAGGATTACCAGGTCGCTGGGCCTGGTGAGGGCTCTGGACCTCATGCGAGCAGTGTCTTT-GAGATGCTTCTG-GGTCC i canFam3.chr16 C 0 C 0 a score=1388892.000000 s hg38.chrUn_KI270754v1 10775 407 + 40191 TCCTTCATGC-TTAGGAACACAGACGCTCATCTTCACTATGCAAACCAGAGCCTGCGTGCCTTTCGTGGT--CCTTCATATTTGCAGTGTGTTGGTTGGAGTTGCTTTCTTAG----CCATGACAGTGACTGAAGGGAATATCAGAGTCTGTTAATGAATGATGCTTAGAGATT-TCATTTTCAAA---ATATATTTTTAAATTACCTAATTATATG-ATATTGTATTGGAAAGTTCTTAGATTAGGTTTCACTTTAGAAATGTGATTTGGCCCTAAGAGTGATAGGAAAGAAATATGTTCCTAATTATTCTCAGATAATTAAAATTCATGCTGTTCTTTATGCTTGTTGAATTAAACATAAAGGGAAGA--CATCTTATTGTTTAATAATTAAAATAATTTGAATTAGA-TTTTAAATTGG s panTro4.chr4_GL389869_random 38179 407 + 69473 TCCTTCATGC-TTAGGAACATGGACGCTCATCTTCACTATGCAAACCAGAGCCTGCGTGCCTTTCGTGGT--CCTTCATATTTGCAGTGTGTGGGTTGGAGTTGCTTTCTTAG----CCATGACAGTGACTGAAGGGAATATCAGAGTCTGTTAATGAATGATGCTTAGAGATT-TCATTTTCAAA---ATATATTTTTAAATTACCTAATTATATG-ATATTGTATTGGAAAGTTCTTAGATTAGGTTTCACTTTAGAAATGTGATTTGGCCCTAAGAGTGATAGGAAATAAATGTGTTCCTAATTATTCTCAGATAATTAAAATTTATGCTGTTCTTTATGCTTGTTGAATTAAACGTAAAGGGAAGA--CATCTTATTGtttaataattaaaataatttgaattaga-ttttaaattGG i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19376570 407 + 23176937 TCCTTCATGC-TTAGGAACACGGTCGCTCATCTTCACTACGCAAACCAGAGCCTGCACGCCTTTCTTGGT--CCTTCACATTTGCAGTGTGTGGGTTGGAGTTGCTTTCTTAG----CCATGACAGTGACTGAAGGGAATATCAGAGTCTGTTAATGAATGATGCTTGGAGATT-TCATTTTCAAA---ATATATTTTTAAATTACCTAATTATATG-ATATTGTATTGGAAAGTTCTTAGATTAGGTTTCACTTTAGAAATGTGATTTGGCCCTAAGAGTGATAGGAAAGAAATGTGTTCCTAATTATTCCCAGATAATTAAAATTTATGCTGTTATTTATGCTTGTTGAATTAAATGTAAAGGAAAGA--CATCTTATTGTTTAATAATTCAAATAATTTGAATTAGA-TTTTAAATTGG i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1399552 407 - 115148730 TCCTTCATGC-TTAGGAACACGGTCGCTCATCTTCACTGTGCAAACCAGAGCCTGCATGCCTTTCGTGGT--CCTTCATATTTGCAGTGTGTGCGTTGGAGTTGCTTTCTTAG----CCATGACAGTGACTGAAGGGAATATCAGAGTCTGTTAATGAAAGATGCTTGGAGATT-TCATTTTCAAA---ATATATTTTTAAATTACCTAATTATATG-ATATCGTACTGGAAAGTTCTTAGATTAGGTTTCACTTTACAAACGTGATTCGGCCCTAAGAGTGATAGGAAAGAAATGTGTTCCTAATTATTCCCAGATAATTAAAATTTATGCTGTTATTTATGCTTGTTGAATTAAACGTAAAGGGAAGA--CATCTTATTGTTTAATAATTCAAATAATTTGAATTAGA-TTTTAAATTGG i nomLeu3.chr7b I 136 C 0 s rheMac3.chr5 493567 406 - 184069350 TCCTTCATGC-TTAGGAACATGGTCACTCATCTTCACTACACACACCAGAGCCTGCGTGCCTTTCGTGG---CCTTCGTATTTGCAGTGTGTGGGTTGGAGCTGCTTTCTTAG----CCATGACAATGACTGAAGGGAATATCAGAGTCTGTTAATGAATGATGCTTGGAGATT-TCATTTTCAAA---ATATATTTTTAAATTACCTAATTATATG-ATATTGTATTGGAAAGTTCTTAGATTAGGTTTCACTTTAGAAATGTGATTTGGCCCTAAGAGTGATAGGAAAGAAATGTGTTCCTAATTATTCCAGGATAATTAAAATTTATGCTGTTATTGATGCTTGTTGAATTAGATGCAAAGGGAAGA--CATCTGATTGTTTAATAATTCAAATAATTTGAATTAGA-TTTTAAATTGG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 495303 406 - 189454096 TCCTTCATGC-TTAGGAACATGGTCACTCATCTTCACTACACACACCAGAGCCTGCGTGCCTTTCGTGG---CCTTCGTATTTGCAGTGTGTGGGTTGGAGCTGCTTTCTTAG----CCATGACAATGACTGAAGGGAATATCAGAGTCTGTTAATGAATGATGCTTGGAGATT-TCATTTTCAAA---ATATATTTTTAAATTACCTAATTATATG-ATATTGTATTGGAAAGTTCTTAGATTAGGTTTCACTTTAGAAATGTGATTTGGCCCTAAGAGTGATAGGAAAGAAATGTGTTCCTAATTATTCCCAGATAATTAAAATTTATGCTGTTATTGATGCTTGTTGAATTAGATGCAAAGGGAAGA--CATCTGATTGTTTAATAATTCAAATAATTTGAATTAGA-TTTTAAATTGG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 392886 406 - 178775436 TCTTTCATGC-TTAGGAACACAGTCACTCGTCTTCACTACACACACCAGAGCCTGCATGCCTTTCGTGG---CCTTCATATTTGCAGTGTGTGAGTTGGAGCTGCTTTCTTAG----CCATGACAGTGACTGAAGGGAATATCAGAGTCTGTTAATGAATGATGCTTGgagatt-tcattttcaaa---atatatttttaaattacctaatTATATG-ATATTGTATTGGAAAGTTCTTAGATTAGGTTTCACTTTAGAAATGTGATTTGGCCCTAAGAGTGATAGGAAAGAAATGTGTTCCTAATTATTCCcagataattaaaatttatgcTGTTATTGATGCTTGTTGAATTAGATGCAAAGGGAAGA--CATCTTATTGtttaataattcaaataatttgaaTTAGA-TTTTAAATTGG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 456115 407 - 135778131 TCCTTCATGC-TTAGGAACACGGTTGCTCGTCTTCACTACGCAGACCAGAGCCTGTGTGCTTTTCATGGT--CCTTCATATTTGCAGTGTGTGGGTTGGAGCTGCTTTCTTAG----CCATGACAGTGACTGAAGGGAATATCAGAGTCTGTTAATGAATGATGCTTGGAGATT-TCATTTTCAAA---ATATATTTTTAAATTACCTAATTATATG-ATATTGTATTGGAAAGTTCTTAGATTAGGTTTCACTTTAGAAATGTGATTTGGCCCTAAGAGTGATAGGAAAGAAATGTGTTCCTAATTATTCCCAGATAATTAAAATTCATGCTGTTATTGATGCTTGTTGAATTAAATGCAAAGGGAAGA--CATCTTATTGTTTAATAATTCAAATAATTTGAATTAGA-TTTTAAATTGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 418695 409 + 190850796 ---GCCATGC-TTTGGAACATGGTCGTTTGCCTTCACGAAGCAAACCAGAGCCTACCTGGCTTTAGTTGT--CGTTCCTATTTGCAGTGTATGGGTTGGAGCTGCTTTCTTGGCACTCCATGACAGTGACTGAAGGGAATTTCAGAGTCTAGTACTCAATGAAGCTTGGAGATT-TTGTTTTCAAA---ATATATTTTCAAATTACCTGACTATATG-ATATTGTATTGGAAAGTTCTTAGATTGGGTTTCACTTTAGAAACCTGATTTGGCCCTAAGAGTGACAGGAAACAAATGTCTTCCTAATTCTTCTCAGATAATTAAAATGTATGCTGTTATTTATGCTTGTTGAGTTAGATGTAAAGGGAAGA--CATCTTACTGTTTAATAATTCAAATAATTTGAATTTGATTTTTAAATTGG i calJac3.chr3 C 0 C 0 s canFam3.chr16 41768289 402 + 59632846 TCGCTCATGCGTTAGTAACACTGTTGTTCCTGTTTACCATACAAACCAGAGCCTATAAGCCTTTTGTTGTTACCTTTATATTTGCAATTTTTGGGTTAGTGCTGCTTTCTTAG----ACATGACACTGGCTGAA-------------TCTGTTCATAAATGGTGCTTAGAGCTGATCATTTTCAAAAATACATGTTTTTAAATTACCTAATTATAAGAACATTTTACTGGTAAGTTTTCAGATTAGGTTTCACATTAG-AATATGATTTGGCCTTATAAATGATAGGCGA-AAATTCATTCTTAATTATTCCGAGATAACTAAAAATTATGTTGTTATTTATGCTTGGCAAATGAAATATAAGGGGAAGAATTTTTTTCTTCTCTAATAATATAAATTATTTGAATTAGA-TTTTAAAGTAG i canFam3.chr16 C 0 C 0 a score=-100.000000 s hg38.chrUn_KI270754v1 11182 1 + 40191 -C s panTro4.chr4_GL389869_random 38586 1 + 69473 -C i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19376977 1 + 23176937 -C i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1399959 1 - 115148730 -C i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 493973 1 - 184069350 -C i rheMac3.chr5 C 0 C 0 s macFas5.chr5 495709 1 - 189454096 -C i macFas5.chr5 C 0 C 0 s papAnu2.chr5 393292 1 - 178775436 -C i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 456522 1 - 135778131 -C i chlSab2.chr7 C 0 C 0 s calJac3.chr3 419104 1 + 190850796 -C i calJac3.chr3 C 0 C 0 s micMur1.scaffold_21930 4620 1 - 10512 -C i micMur1.scaffold_21930 N 0 N 0 s canFam3.chr16 41768691 1 + 59632846 G- i canFam3.chr16 C 0 C 0 a score=2032335.000000 s hg38.chrUn_KI270754v1 11183 637 + 40191 CTCAGGAA-CATCACCTTGGTTCATTTACTGATAATACATTCCAAAACTGATGATTCTAACTACTTACCTTTGAAGGAAAAAATTTGGCTTTTTTTCCTCATTTCTTCTCTCCCTCCTCCTTGAGAGTAATGTGGTGTGGTGGAAGAAAGATTTGCTGAGTGTTTGGAAGCTTACG-TTTTAGCTTGGCCTCCAATATTTCCTCATAGTAAATCTCTAAAGCCCTTTGAATTCTTTGAATTCAATTTCCTCTGTGGCAAAATGGAGCTAGTAATGCAACCTCATGCAAACAACAGAGACTCAGATGAGAGAACTGATATGAAGACATTAATACAGCTGCAAAACATTATATAAATG---------------------------------CAAGGTATTATAATTACTA-GTTCTGGTTCAATACAAGGCACTCCATGCATGTGGAAAATAACTACCTATGGCCA-AAAGGCGCATCATGAGTGTCTCCTCCTG-CCACGGCTCCCCAGG---TCTTCCGTCATCCCATTTCA-TTCCTAGAGGCAACCACTGTTCCTGGTGAGTGCTAAGGACCTTCTGGAAATAGCGACACAGCAAGAGATTTTGCTAAGTATGTTTAATAGACATAGGGCCCACTTCCCAGGAGAATACC-TTTTAATTTTAGTAGGACACAGTTTTC s panTro4.chr4_GL389869_random 38587 637 + 69473 CTCAGGAA-GATCACCTTGGTTCATTTACTGATAGTACATTCCAAAACTGATGATTCTAACTACTTATCTTTGAAGGAAAAAATTTGGCTTTTTTTCCTCATTTCTTCTCTCCCTCCTCCTTGAGAgtaatgtggtgtggtggaagaaagatttgctgagtgtttggaagcttatg-ttttagcttggcctccaatatttcctcatagtaaatctctaaagccctttgaattctttgaattcaatttcctcagtggcaaaatggagctggtaatgcaacctcatgccaacaacagagactcaaatgagagaactgatatgaatacattaatacagctgcaaaacattatataaatg---------------------------------caaggtattataattactA-GTTCTGGTTCAATACAAGGCACACCATGCATGTGGAAAATAACTACCTATGGCCA-AAAGGCGCATCATGAGTGTCTCCTCCTG-CTACGGCTCCCCAGG---TCTTCCGTCATCCCATTTCA-TTCCTAGAGGCAACCACTGTTCCTGGTGAGTGCTAAGGACCTTCTGGAAATACTGACACAGCAAGAGATTTTGCTAAGTATGTTTAATAGACATAGGGCCCACTTCCCAGGAGAATACC-TTTTAATTTTAGTAGGACACAGTTTTC i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19376978 628 + 23176937 CTCAGGAA-GATCACCTTGGTTCATTTACTGATAATACATTCCAAAACTGATGATTCTAAGTACTTACCTTTGAAGGAAAAAATTTGGCTTTTTTTCC-CATTTCTCCTCTCCCTCCTCCTTgagagtaacgtggtgtggtggaagaaagatttgctgagtgtttggaagcttacg-ttttagcttggcctccaatatttcctcatagtaaatctctaaagcc---------ctttgaattcaatttcctcagtggcaaaatggagctagtaatgcaacctcatgcaaccaacagagactcaaatgagagaactgatatgaagacattaatacagctgcaaaacattatataaatg---------------------------------ccaggtattataattactA-GTTCTGGTTCAATACAAGGCACTCCATGCATGTGGAAAATAACTACATAGGGCCA-AAAGGTGCATCATGAGTGTCTCCTCCTG-CCACTGCTCCCCAGG---TCTTCCGTCGTCCCATTTCA-TTCCCAGAGGCAACCACTGTTCCTGGTGAGTGCTAAGGACCTTCTGGAGATACCGACACAGCAAGAGATTTTGCTATGTATGTTTAATAGACATAGGGCCCACTTCCCAGGAGAATACCTTTTTATTTTTAGTAGGACATAGTTTTC i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1399960 629 - 115148730 CTCAGGAA-GATCACCTTGGTTCATTTACTGATAATACATTCCAAAACTGATGATTCTAACTACTTACCTTTGAAGGAAAAAATTTGGCTTTTTTCCCTCATTTCTCCTCTCCCTCCTCCTTgagagtaatgtggtgtggtggaagaaagatttgctgactgtttggaagcttaca-ttttagcttggcctccaatatttcctcatagtaaatctctaaagcc---------ctttggattcaatttcctcagtggcaaaatggagctagtaatgcaacctcatgcaaccaacagagacccaaatgagagaactgatatgaagacattaatacagcttcaaaacattatataaatg---------------------------------caaggtattataattaCCA-GTTCTGGTTCAATACAAGGCACTCCATGCATGTGGAAAATAACTACGTAGGGCCA-AAAGGTGCATCATGAGTGTCTCCTCCTG-CCGCTGCTCCCCAGT---TCTTCCATCGTCCCATTTCA-TTCCCAGAGGCAACCTCTGTTCCTGGTGAGTGCTAAGGACCTTCCGGAGATACTGACACAGCAAGAGATTTTACTAAGTATCTTTAATAGACATAAGGCCCACTTCCCAGGAGAATACCTTTTTATTTTTAGTAGGACATAGTTTTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 493974 665 - 184069350 CTCAGGAA-GATCCCCTCGGTTCATTTACTGATAATACCTTCCCAAACTGATGATTCTAACTACTTACCTTTGAAGGAAAAAATTTAGCTTTCTTTCCTCAGTTCTCCTCTCCCTCCTCCTTGAGAgtaatgtggtgtggtggaagaaagatttgctgagtgtttggaagcttatg-ttttagcttggcctccaatatttcctcacagtaaatctctaaagcc---------ctttgaattcaatttccccagtggcaaaatggagctagtaatgcaacctcatgcaacccacagagactcaaatgagagaactgatacgaagacgttgttacagctgcaaaacattatataaatgcaaggtattagaattactGTAATTATAGAAATCCAAGGTATTATAATTACTA-GTTCTGGGTCAATACAAGGCACTCCATGCATGTGGAAAATAACTACGTAGGGCCA-AAAGGTGCATCATGAGTGTCTCCTCCTG-CCACTGCTCCCCAGGTCTTCTTCCGTCGTCCCATTTCA-TTCCTAGAGGCAACCACTGTTCCTGGTGAGTGCTAAGGACCTTCCAGAGATGCTGACACAGCGAGAGATTTTACTAAGTATGTGTAATAGACATAGGGCCCACTTCCCAGGAGAATACCTTCTTACTTTCAGTAGGACATAGTTTTC i rheMac3.chr5 C 0 I 11 s macFas5.chr5 495710 665 - 189454096 CTCAGGAA-GATCCCCTCGGTTCATTTACTGATAATACCTTCCCAAACTGATGATTCTAACTACTTACCTTTGAAGGAAAAAATTTAGCTTTCTTTCCTCAGTTCTCCTCTCCCTCCTCCTTGAGAgtaatgtggtgtggtggaagaaagatttgctgagtgtttggaagcttatg-ttttagcttggcctccaatgtttcctcacagtaaatctctaaagcc---------ctttgaattcaatttccccagtggcaaaatggagctagtaatgcaacctcatgcaacccacagagactcaaatgagagaactgatacgaagacgttgttacagctgcaaaacattatataaatgcaaggtattagaattactGTAATTATAGAAATCCAAGGTATTATAATTACTA-GTTCTGGGTCAATACAAGGCACTCCATGCATGTGGAAAATAACTACGTAGGGCCA-AACGGTGCGTCATGAGTGTCTCCTCCTG-CCGCTGCTCCCCAGGTCTTCTTCCGTCGTCCCATTTCA-TTCCTAGAGGCAACCACTGTTCCTGGTGAGTGCTAAGGACCTTCCAGAGATGCTGACACAGCGAGAGATTTTACTAAGTATGTGTAATAGACATAGGGCCCACTTCCCAGGAGAATACCTTCTTACTTTCAGTAGGACATAGTTTTC i macFas5.chr5 C 0 I 11 s papAnu2.chr5 393293 661 - 178775436 CTCAGGAA-GATCCCCTCGGTTCATTTACTGATAATACATTCCCAGACTGATGATTCTAACTACTTACCTTTGAAGGAAAAAATTTGGCTTTCTTTCCTCagttctcctctccctcctccttgagAATAATGTAGTGTGGTGGAAGAAAGATTTGCTGAGTGTTTGGAAGCTTATG-TTTTAGCTTGGCCTCCAGTATTTCCTCACAGTAAATCTCTAAAGCC---------TTTTGAATTCAATTTCCCCAGTGGCAAAATGGAGCTAGTAATGCAACCTCATGCAACCCCCAGAGACTCAAATGAGAGAACTGATACGAAGACGTTGTTACAGCTGCAAAACATTATATAAATGCAAGGTATTAGAATTACTGTAATTACAGAAATCCAAGGTATTATAATTACTA-GTTCTGGGTCAATACAAGGCGCTCCATGCATGTGGAAAATAACTACATAGGTCCA-AAAGGTGCATCATGAGTGTCTCCTCCTG-CCGCTGCTCCCCAGG---TCTTCCGTCGTCCC-TTTCA-TTCCTAGAGGCAACCACTGTTCCTGGTGAGTGCTAAGGACCTTCCAGAGATACTGACGCAGCGAGAGATTTTACTAAGTATGTGTAATAGACATAGGGCCCACTTCCCAGGAGAATACCTTTTTACTTTCAGTAGGACATAGTTTTC i papAnu2.chr5 C 0 I 11 s chlSab2.chr7 456523 662 - 135778131 CTCAGGAA-GATCCCCTCGGTTCATTTACTGATAATACATTCCCAAACTGATGATTCTAACTACTAACCTTTGAAGGAAAAAATTTGGCTTTCTTTCCTCAGTTCTCCTCTCTCTCCTCCTTGAGAATaatgtagtgtggtggaagaaagatttgctgagtgtttggaagcttatg-ttttagcttggcctccaatatttcctcacagtaaatctctaaagcc---------ctttgaattcaatttccccagtggaaaaatggagctagtaatgcaacctcatgcaacccacagagactcaaatgagagaactgatatgaagacgttgttacagctgtaaaacattatataaatgcaaggtattagaattactATAATTATATAAATCCAAGGTATTATAATGACTA-GTTCTGGGTCAATACAAGGCACTCCATGCATGTGGAAAATAACTACGTAGGGCCA-AAAGGTGCATCATGAGTGTCTCCTCCTG-CCACTGCTCCCCAGG---TCTTCCGTCGTCCCATTTCA-TTCCTAGAGGCAACCACTATTCCTGGTGAGTGCTAAGCACCTTCCAGAGATACTGACACAGCGAGAGATTTTACTAAGTATGTGTAATAGACATAGGGCCCACTTCCCAGGAGAATACCTTTTGACTTTCAGTAGGACATAGTTTTC i chlSab2.chr7 C 0 I 11 s calJac3.chr3 419105 628 + 190850796 CTCAGGAA-GATCAGCTTGGTTTATTTATTGATTAT-CATTCCAAAACTGATCATTCTAACTACTTACCTTTGAAGG-AAATATCTGGCTTTCTTTTCTCGTTTCTCCTCCCCCTCCGCCTTGACAGGaatgtggtgcagtggaggaaagattggctatgtgtttggaggcttaca-ttttagtctggcctccgatatttcctcatagtgaatctccaaagcc---------ctttgatttcaatttccccagcggtaaaatggagctagtaatgcaacctcatgcaactcgtagagactcacatgagagaactgacctgaagagattgttacagccgcaaaacaccacagaaatg---------------------------------caaggtacggtaattacta-GTTCTGGTTCGATACAAGGTACTCCACACACATGGAAAATAACTGCGTAGGACCA-AAAGGTGCCTCATGAGAGTCTCCTCCTGCCCGCTGCTCCCCAGG---TCTTCAGTCTTCCTGTTTCACTTCCCAGGGGCAA-CAGGGTTCCTGGTGAGTGCTAAGAACCTTCCGGAGATACCGACGCAGCAAGAGATTTTACCAAGTATGTGTAACAGACATAGGGCCTGCTTCCCAGGAGAATATCTTTTTATTTTAAGTAGGATACAGCTTTC i calJac3.chr3 C 0 I 11 s canFam3.chr16 41768692 619 + 59632846 CTTAGTGGC-ATCACCTTGGTT-GTTTATTGATAATATTCTCCCAAACTGATAATTCTGACTACTCTCCTCTGGAGGAAATAATTTGACTCTGTATTCTCATTT-------CCCTTACTCTTGAaaacaacatggtgtcatggaataaggactggactaatgtttggaaacttgtatttttagtctgtcttgcgatatttactcatagaaaatatataaagct---------ctttgatttaaatttccccattggtaagatggagttaaaaatacagactcatacaactcacagagtctcaaatgacagagtagatctaaa---atatttaaaactgccaattatgatacaaatg------------------------atataaatgcaaggtgttataattaCAAGGCTCTGGTCTATTACGAAATAACACATACATATGGAAAA---------ATATCCATAGAAGTACACTGTGCAAACTTCCTCTGC-CTGCTGTTCCCCAGT---TCCTCAGGTCCTCAATTTCACTTCCCAGAGGCAGCTGCTATTCCTGATGCGTTCTGGAAACC-CCCGGGGGTGCTGACATTGGGGGAGATTTTACTAAGCATGTTTAATAGGTCTACAGCCTACTTCCTAGGAAACTACATTTTTATTTTTACTAGAACATATTTT-- i canFam3.chr16 C 0 C 0 a score=4596.000000 s hg38.chrUn_KI270754v1 11820 32 + 40191 TCAAGATTTGCTCAAGATTTAAGGAATCGTAC s panTro4.chr4_GL389869_random 39224 32 + 69473 TCAAGATTTGCTCAAGATTTAAGGAATCGTAC i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19377606 32 + 23176937 TCAAGATTTGCTCAAGATTTAAGGAATCATAG i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1400589 7 - 115148730 TCAAGAT------------------------- i nomLeu3.chr7b C 0 C 0 s canFam3.chr16 41769311 13 + 59632846 TCAGTGTGTGCTA------------------- i canFam3.chr16 C 0 C 0 e chlSab2.chr7 457185 11 - 135778131 I e calJac3.chr3 419733 11 + 190850796 I e papAnu2.chr5 393954 11 - 178775436 I e macFas5.chr5 496375 11 - 189454096 I e rheMac3.chr5 494639 11 - 184069350 I a score=854118.000000 s hg38.chrUn_KI270754v1 11852 295 + 40191 TTGCTCAAGATTTAAGGAATACCACTTAGGAA-TTTTTTTGGTTAAAATAGAAAAGAGTA-GGATCTCTATGCTGTTAGCTTGCTGAACCAGC-CATTTCTCAGATGTGGGGTGAAATTCATGGAGTACCACC-GAAGGGGTGGAAATAAC---ACA-AGGAGCATGAGGTATCAGCCACATACCTGCCTTCACTACCCAAAAGGTAGCatttcttttcaaagctgtttctcccctttctcgtttgtagatcactgggtgacagctctgacagaaacgaatagcaggtgggATGACATGCGTT s panTro4.chr4_GL389869_random 39256 295 + 69473 TTGCTCAAGATTTAAGGAATACCACTTAGGAA-TTTTTTTGGTTAAAATAGAAAAGAGTA-GGATCTGTATGCTGTTAGCTTGCTGAACCAGC-CATTTCTCAGATGTGGGGTGAAATTCATGGAGTACCACC-GAAGGGGTGGAAATAAC---ACA-AGGAGCATGAGGTATCAGCCACATAGCTGCCTTCACTACCCAAAAGGTAGCATTTCTTTTCAAAGCTGTTGCTCCCCTTTCTCCTTTGTAGATCACTGGGTGACAGCTCTGACAGAAACGAATAGCAGGTGGGATGACATGCGTT i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19377638 300 + 23176937 TTGCTCAAGATTTAAGGAATACCACTTAGTAATTTTTTTTGGTTAAAATAGAAAAGAGTAGGGATCTGTATGCTGTTAGCCTGCAGAACCAGC-CATTTCTCAGATGTGGGGTGAAATTCATGGAGCACCACC-GAAGGGGTGGAAATAACACAACA-AGCAGCATGAACTATCAGCCACAGAGCTGCCTTCACTCCCCACCACATAGCATTTCATTTCAAAGCTGTTGCTCCCCTTTCTCGTTTCTAGATCACTGGGTGACAGCTCTGGCAGAAACGAATAGCAGGTGGGATGACATGCATT i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1400596 295 - 115148730 TTGCTCAAGATTCAAGGAATACCACTCAGTAA-TTTTTTTGGTTAAAATAGAAAAGAGTAGGGATCTGTATGCTGTTAGCTTGCTGAACCAGC-CATTTCTCCAATGTGGGGTGAAATTCATGGAGCACCACT-GAAGGGGTGGAAATAAC---ACA-AG-AGCATGAACTATCAGCCACAGATCTGCCTTCACTCCCCACCATGTAGCATTTCTTTTCAAAGCTGTCACTCCCCTTTCTCGTTTCTAGATCACTGGGTGACAGCTCTGGCAGAAACAAATAGCAGGTGGGATGACATGCCTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 494650 295 - 184069350 TTGCTCAAGATCTGAGGAATACCACTTAGTAG-TTTTTTTGTTTAAAATAGAAAAGAGTAGAGATCTGTGTGCTGTCAGCT----GAACCGGT-CATCTCTCAGATGTGGGGTGAGGTTCAGGGAGCACCACC-GAAGGGGCGGAAATAACACAACG-AGGAGCCTGAACACTCAGCCCCAGACCGGCCTTCGCTCCCCACCACGCGTCATTGCTTTTCAGCGCTGTTGCTCCCCTTTCTCATCTCTAGATCACTGGATGACGGCTCTGGCAGAAACAAACAGCAGGTGCGATGACATGCGCT i rheMac3.chr5 I 11 C 0 s macFas5.chr5 496386 295 - 189454096 TTGCTCAAGATCTGAGGAATACCACTTAGTAG-TTTTTTTGTTTAAAATAGAAAAGAGTAGAGATCTGTGTGCTGTCAGCT----GAACCGGT-CGTCTCTCAGATGTGGGGTGAGGTTCAGGGAGCACCACC-GAAGGGGCGGAAATAACACAACG-AGGAGCCTGAACGCTCAGCCCCAGACCGGCCTTCGCTCCCCACCACGCGTCATTGCTTTTCAGCGCTGTTGCTCCCCTTTCTCGTCTCTAGATCACTGGATGACGGCTCTGGCAGAAACAAACAGCAGGTGCGATGACATGCGCT i macFas5.chr5 I 11 C 0 s papAnu2.chr5 393965 295 - 178775436 TTGCTCAAGATCTGAGGAATACCACttagtag-tttttttgtttaaaatagaaaagagtaGAGATCTGTGTGCTGTCAGCT----GAACCGGC-TGTTTCTCAGATGTGGGGTGAAGTTCAGGGAGCACCACC-GAAGGGACGGAAATAACACAACA-AGGAGCCTGAACGCTCAGCCCCAGACCGGCCTTTGCTCCCTACCACGCGTCATTGCTTTTCAGCGCTGTTGCTCCCCTTTCTCGTCTCTAGATCACTGGATGACGGCTCTGGCAGAAACCAACAGCAGGTGCGATGACATGCGCT i papAnu2.chr5 I 11 C 0 s chlSab2.chr7 457196 295 - 135778131 TTGCTCAAGATCTGAGGAATACCACTTAGTAG-TTTTTTTGTTTAAAATAGAAAAGAGTAGAGATCTGTGTGCTGTCAGCT----GAACCAGC-TGTTTCTCAGATGCGGGGTGAAGTTCAGAGAGCACCACC-GAAGGGGTGGAAAGAACACAACA-AGGAGCCTGAACGCTCAGCCCCAGACCGGCCTTCGCTCCCCACCATGCGTCATTGCTTTTCAGCGCTGTTGCTCCCCTTTCTCGTCTCTAGATCACTGGATGACGGCTCTGGCAGAAACGAACAGCAGGTGCGATGACATGCGCT i chlSab2.chr7 I 11 C 0 s calJac3.chr3 419744 281 + 190850796 TTGCTGAAGATTTAAGGGATACCACTTAATGA--TTTTTCGTTTAAAACAGGAAAGAGTAGAAATCTGTATGCTGTTAGCA----------------TGCTGAGAAGTGGGGTGAAGTTCACGGAGCACCACC-TAAGCAG-GGGAATAGCACGACA-AGGAGCACAAACTCTCAGCAACAGACCTGCCTTTACTCCCCATCATGTATCAGTTCGTTTAAAAGCTGCTGCTCCTTTTTCTCGCCTC-GGCTCATTGGATGACAGCTCTGGCTGAAAAGAATAGCAGGTGAGATGGCACGTGTT i calJac3.chr3 I 11 I 1094 s canFam3.chr16 41769324 301 + 59632846 TTGCTCAAGATTTAAGGAATACAGCTTAATCATTTTTCTTGTTTCAAACAGAAAAGAGTAGAAATCCGCATGCTGTTAGCTTGCTGAACCAGTGTGTTTCCCAGATAAGTGCTGAAGTTCATGAGATACCACCTAAAGGGATGGAAATAATGCTGCACAGGAATATGGCCTTTCAGCAACAGACACAATTTCACACCACACA--TTATTACTTCTTGTAAAAGCTCTTGCTCCCCTTTCTCATCTCCAGATCACTGGATGACAGCTCTGGCAGAAACAAATAGCAGGTGGGATGACATGTATT i canFam3.chr16 C 0 C 0 a score=618803.000000 s hg38.chrUn_KI270754v1 12147 184 + 40191 CGTGGGATTTAGGTTATAGTTTGGCTGTAACATATTGCTGTGTCTCTTTTTCCAGACATGCC-----TTCATTTCGTAGGCTCAACACCTCTTTTCAACGTAATGATTAGATTCAAGGCCTGCATTTCAGTCAAGACGTAGTCACGAGTCACTGTGTTCTTATTGTCACAGCTGGGGCTTCAAGCCCAC s panTro4.chr4_GL389869_random 39551 184 + 69473 CGTGGGATTTAGGTTATAGTTTGGCTGTAACATACTGCTGTGTCTCTTTTTCCAGACATGCC-----TTCATTTCGTAGGCTCAACACTTCTTTTCAACATAATGATTAGATTCAAGGCCTGCATTTCAGTCAAGACGTAGTCACGAGTCACTGTGTTCTTATTGTCACAGATGGGGCTTCAAGTCCAC i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19377938 189 + 23176937 TGTGGGATTTAGGTTATAGTTTGGCTGTAACATATTGCTGTGTATCTTTTTCCAGACATGCCTTCATTTCATTTCGTAGGCTCAACACCTCTTTTCAACATAATGATTAGATTCAAGGCCTGCAATTCAGTCAAGACCTAGTCACGGGTCACTGTGGTCTTATTATCATAGCTGGGGCTTCAAGCCCAC i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1400891 183 - 115148730 TGTGGGTTTTAGGTTATAGTTTGGCTGTAACATATTGCTGTGTCTCTTTTTCCAGACAT-CC-----TTCATTTCGTAGGCTCAACACCTCTTTTTAACATAATGATTAGATTCAAGGCCTGCAATTCAGTCAAGACGTAGTTACGGGTCACTGTGGTCTTATTATCACAGCTGGGGCTTCAAGCCCAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 494945 180 - 184069350 TGTGGGTTTTAGGTTCTAGTTTGGCTGTAACATGTTGCTGTGTCTCTTCTTCCAGACATGCC-----TTCATTTCGTAGGCTCAACACCTCTGTTTAACATCATAATTAGATTCAAGAC---CAATTCAGTCAAGACGTCGTCACAGGTCAC-GTGGTCTTATTATCACAGCTGGGGCTTCAAGCCCAC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 496681 180 - 189454096 TGTGGGTTTTAGGTTCTAGTTTGGCTGTAACATGTTGCTGTGTCTCTTCTTCCAGACATGCC-----TTCATTTCGTAGGCTCAACACCTCTGTTTAACATCATAATTAGATTCAAGAC---CAATTCAGTCAAGACGTCGTCACAGGTCAC-GTGGTCTTATTATCACAGCTGGGGCTTCAAGCCCAC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 394260 180 - 178775436 TGTGGGTTTTAGGTTCTAGTTTGGCTGTAACATGTTGCTGTGTCTCTTCTTCCAGACATGCC-----TTCATTTCATAGGCTCAACACCTCTGCTTAACATCATAATTAGATTCAAGAC---CAATTCAGTCAAGACGTCGTCACAGGTCAC-GTGGTCTTATTATCACAGCTGGGGCTTCAAGCCCAC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 457491 180 - 135778131 TGTGGGTTTTAGGTTCTAGTTTGGCTGTAACATATTTCTGTGTCTCTTCTTCCAGACATGCC-----TTCATTTTGTAGGCTCAACACCTCTGCTTAACATCATAATTAGATTCAAGAC---CAATTCAGTCAAGACGTCGTCACAGGTCAC-GTGGTCTTATTATCACAGCTGGGGCTTCAAGCCCAC i chlSab2.chr7 C 0 N 0 s calJac3.chr3 421119 183 + 190850796 TGTGGGTTTTAGGTTATAGTTTGGCTGTAACATATTGCTGTGTCTCTTTTTCCAGGCAGGTC-----TTTCTTTCGTAGGCTCAGTATCTCTTTTTAACATAATGATTATATTCAAAACCTCCAATTCAATCAAAATGTAGTCAC-GGTCACTGTGGTCTTATTATCACAGCTGGGACTTCAAGCCCAG i calJac3.chr3 I 1094 C 0 s canFam3.chr16 41769625 184 + 59632846 TGTGGATTTTAGGTTATAGTTTGGCTTTAACATATTGCCATGTCTCTTTTTCCAGACTTGCC-----TTCCTTTTGGAGGCTCAACACCTCTTCTTAACATAATGATTAGATTCAAGACCTGCAATTCAGTCAAGATGTAGTCACGGGTCAGCGTACTCCTATTATCACAGCTGGGGCTGCAATCCCAT i canFam3.chr16 C 0 C 0 a score=37659.000000 s hg38.chrUn_KI270754v1 12331 15 + 40191 ATCAGCTCTTCCAGA s panTro4.chr4_GL389869_random 39735 15 + 69473 ATCAGCTCTTCCAGA i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19378127 15 + 23176937 ATCAGCTCCTCCAGA i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr7b 1401074 15 - 115148730 ATCAGCTCTTCCAGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 495125 15 - 184069350 GTCAGCTTTTCCAGA i rheMac3.chr5 C 0 N 0 s macFas5.chr5 496861 15 - 189454096 GTCAGCTTTTCCAGA i macFas5.chr5 C 0 N 0 s papAnu2.chr5 394440 15 - 178775436 GTCAGCTTTTCCAGA i papAnu2.chr5 C 0 C 0 s calJac3.chr3 421302 15 + 190850796 GTTGCCTCTTCCAGA i calJac3.chr3 C 0 N 0 s canFam3.chr16 41769809 15 + 59632846 GTTGCCTATTCCAGA i canFam3.chr16 C 0 C 0 a score=1365.000000 s hg38.chrUn_KI270754v1 12346 1 + 40191 A s panTro4.chr4_GL389869_random 39750 1 + 69473 A i panTro4.chr4_GL389869_random C 0 C 0 s ponAbe2.chr4_random 19378142 1 + 23176937 A i ponAbe2.chr4_random C 0 N 0 s nomLeu3.chr7b 1401089 1 - 115148730 A i nomLeu3.chr7b C 0 N 0 s papAnu2.chr5 394455 1 - 178775436 A i papAnu2.chr5 C 0 C 0 s canFam3.chr16 41769824 1 + 59632846 A i canFam3.chr16 C 0 C 0 a score=1907.000000 s hg38.chrUn_KI270754v1 12347 7 + 40191 GATCAAG s panTro4.chr4_GL389869_random 39751 7 + 69473 GATCAAG i panTro4.chr4_GL389869_random C 0 C 0 s papAnu2.chr5 394456 7 - 178775436 CAGCAAG i papAnu2.chr5 C 0 N 0 s canFam3.chr16 41769825 7 + 59632846 CAGCGAG i canFam3.chr16 C 0 N 0 a score=192728.000000 s hg38.chrUn_KI270754v1 12354 2460 + 40191 GGAGTCAGGCCAcccaggagcagaggagaggatgtccctcaagaatgagacaggaaatgcagaggaaatgggacaccacctgtcctggaagacaaggccagtcacggtctcgtagcactcattctaggcaatccacccacccatgaggggaaacgtggggaagaagaaagcttccctgcctgagacacgtatggaagccaagagctcCTGGGTCATGATACCTGCCCAATTAAGCAGAAACAGGTTTGGAGACAGAAACGATCATGACACGGACCTCCAGGAAGTGTCTCCTTGACGGACTGGGAAGTCATCTTTGTTGAAGGCATTCGGTCAGAGCGAAACGCATCCAGGCCCCTGAGAAATAGGGgaggcagagccagagggaggagagagcagaggccagagcacaggcagGATACAGCACTGTGCCACGGCCACGGGTGTAAGGGGTGGGGTTCCAAAAGGGTGGCTTGTCCAGAGAGGCCAGCGTTCCAGTGACAGGGATTGTTGCCATCTTCCATTCCCGGTTTCCTCTTGCTGACTGTATCGTGGAGTGGCTTCATTTCTCAGAGAAGAGCCGTGAAGAGATACAAGCGTCTTCTCTAGCGTGGATCCGCTGCTCTCCTGTGGGACAAAGAGTTCCTCTGGGGCTCTTGTCCTCCGCTGCAGTATGTTCATCTTGATCCTAGAAAAGAGGCTGCACAGGATGGGGATGAGATTTCACTTGCTCCGGGAGCGACGCGTCTTCTCACGTGGGCCAGGCTTTCACACACCCAAAGCGGATCCGCCGCGGCAAAAATGATTGACAGCCGGCTTCATGACCCAGGCAGAGAAGCAGAAAGAGGCTCGCCAAAGACAGGCCACCATGCGACAAACCACTTTGTGCCGCACAGGGCACATTCGGCCAAAGACACACATGCACACGGGCATACACACACAAATCCATagagagagggaaagaaacacacagagactgagagatagagagagaagagagaatgggagacacacaaacagacacacacacacacgcagagtcatacaacaGAGGCATTGAAACACacaccctctggcaacccctgaggctgcgggattctgctctggaggagaacgaccctcgggtgagagagcagccgaggggcacgcaggccgacccgtcctcgagatcacagacagcggtaaggcttttggtgagactcaccccaaccaacaccgtccgtgcaggcctgaggctgggatcccgtgctgcttcccccgtctccgcctggggtttcatcatcatggtcggccctttgcgactgctatcatcaggagaggttcccttcgaccccgtggaaaggtgaggccggagcctcagagcctggatgcccaagcagtgccagggagggctcctgctctgccaagcctcgggaactggtgtctaagacaaccgtgggaaccactgtgacgggagaaaccgctcgcgcctagcgcatgcgcattggctgagccgactcacgctccactcctgacagataggctgcgtcccctttaaatatcgccaccgctgcgtggcggccgcgatgctcctgctgccgccccggcagcgcctgtgtcctgggtcctgtatcaggcggcgtgggagagggggcgacgggtgtctggtcctgtcccaggcccaaacccccagggctcctgtcctcaggacctgcttcagccgacttccaccaagggagggggagcttcaggatgcctgctgtgttctctggactcccgttgagatcccattctggccc-ctccgagtgacataggatgggctcaccacatgtggtcaggccggcagggcctcgctgcagcacacaatgaccccataggtctcaaggcctagtgtcaga-gcaaactcattcatccatcagccctctgcctccctcctcctttgaaagagcagtggcctgccccgcttgtaaaagccgaggggttccggaaagccgaccatgatttacaggacaactgcaaagaggaagagaggcgaaatccagggggagaccatgtgaccacgcgtggcactggccaatcccacagcagttggtgttaacgtgtgacaccggaggcaaacggggcgacggcgaaacgaagggtggggtccatgcacgtggcggtggaagggggaaacgggtgacctttccgtcaatgccaaggaaaatcaaacaacacctgggacccggagggtgtgggggacgtctgtgcctgacccaagccacgttttcaaatgcctaccagaggaacaaagatgtttctgccaatttcgcaacacccccaatcctccaccgacctcgtagccctgaagcaacttcGGCTGGCACAAACCCACAAagagtgggaaagaaacacacagagactgacagacagagggagaagagagaatgggagacaaacacacagacacacacacacacacgcagaGTcatacagcagaggcat s panTro4.chr4_GL389869_random 39758 2413 + 69473 GGAGTCAGGCCAcccaggagcagaggagaggatgtccctcaagaatgagacaggaaatgcagaggaaatgggacaccacctgtcctgtaagacaaggccagtcacggtctcatagcgctcattctaggcaatccacccacccgtgaggggaaacgtggggaagaaggaagcttccctgcctgagacacgtatggaagccaagatctcCTGGGTCATGATACCTGCCCAATTAAGCAGAAACAGGTTTGGAGAGAGAAACGATCATGACACGGACCTCCAGGAAGTGTCTCCCTGACGGACTGGGAAGTCATCTTTGTTGAAGGCATTCGGCCAGAGCGAAAGGCATCCAGGCCCCTGAGAAATAGGGGAGGCAGAGCCAGAGGGAGGAGAGAGCAGAGGCCAGAGCCCAGGCAGAATACAGCACCGTGCCACTGCCACGGGC------GGTGGGGTTCCAAAAGGGTGGCTTGTCCAGAGAGGCCAGCATTCCAGTGACAGTGATTGTTGCC---------------------------------ATCGTGGAGTGGCTTCATTTCTCAGAGAAGAGCCGTGAAAAGATACAAGCGTCTTCTCTTGT-----TCCACTGCTCTCCTGTGGGACAAAGAGTTCTTCTGGGGCTCTTGTCCTCGGCTGCAGTGTGTTCATCTTGATTCTAGAAAAGAGACCGCACAGCATGGGGATGAGATTTCAGTTGCTCCGGGAGCGACGCATCTCCTCACGTGGGCGAGGCTTTCAGAAACCCAAAGCGGATCCGCCGCGGCGAGAATGATTGACAGCCGGCCTCACAACCCAGGCAGAGACGCAGAAAGAGGCTCGCCAAAGACAGGCTGCCATGCGACAAACTGCTTTGTGGCGCACAGGGCACATTCGGCCAAaggcacacacgcacacgggcatacacacacaaatccatagagacagggaaagaaacacacagagactgagagacagagagagaagagagaatgggagacacacacacag----acacacacacGCGGAGTcatacagcagaggcattgaaacacacacccccaggcaacccctgaggctccggagctcagctctggaggagaacgaccctccggtgagagagcagcccaggggaacgcaggccgacccgtccttgagatcacggatggcagcacgacttttggcgagactcaccccaaccaacaccgtccgtgcaggcctgaggctgggatcccgtgcggcttcccctgtctccgcctggggtttcatcttcatggtcggccctttgcgactcctggcatccggagacattcccttcgaccccgtggagaggagaggccggagcctcagagcctcgataaccaagcactgccacggagggttccgaatctgccaagcctcggggactggattctaagacaaccgtgggaatcactgtgacgggagaaactgctcgcgcatcgcgcatgcgcattggctgagccgactcgcgctccactcctgacagataggctgcgtcccctataaagatcgccaccgctgcgcggctgccgcgatgctcctgctgccgccgcggcggcggctggatcctgggtcctgtatggggcggcatgggagaggaggccgcgggtgtctcgtcctgtcccaggcccaaacctccaggggtcctgttctcaggacctgcttgagctgacttccaccgagggagggggagcttcaggacgcctgctgtgttctccgggctccctttgagatcagattttgacccactccgagtgagacaggatgggctcaccacatctggtcaggccggtagggcctggctgcaggacagaatgatcccataggtctcaaggcctagtgtcagctgcaaattcactcatccatcagccctctgcctccctcctcctttgaaagagcagtggcctgcccggcttgtaaaagccctggggttccggaaagccgaccgcgctttacagcacacctgcaatgaggaacagaggcgaatctgagggggagaccatgtgaccacgcgtggcattggccaatcccacagcagttggtgttaatgtgtgtcaccggaggcattcggggcgacggcgaaacaaagggtagtgtccaggtttgtgccagtggaagggggaaaccggtgacatttccatcaatgccaaggaaagtcaaaggacacctgggacccgggggttgcgggggccgcctgtgcctgacccaagccacgttttcaaatgcctaccagaggagcaaagaggtttctgcaaaatttgcaacacacccaatcctccatcgatctggtagcccagacgcaacttcggctggcacaaacccaCagacagtgggaaagaaatacagagagactgagagacagagagagaagagagaatgggagacacacacacacacacacacacacacacacacacacacaca-caGAGTCAT i panTro4.chr4_GL389869_random C 0 I 9 a score=0.000000 s hg38.chrUn_KI270754v1 14814 71 + 40191 tgaaacacacacccccaggcagcccctgaggctccggggttctgctctggaggagaacgaccatcgggtga e panTro4.chr4_GL389869_random 42171 9 + 69473 I a score=198604.000000 s hg38.chrUn_KI270754v1 14885 2734 + 40191 gagagcagcccaggggcacgcagcccgacacgtcctcgagatcacggacagcggcaaggcttttggcgagactcaccccaaccaacaccgtccgtgcaggcctgaggctgggatcccgtgctgcttcccccgtctccgcctggggtttcatcatcatggtcggccctttgcgactgctgtcatcaggagaggttcccttcgaccccgtggagaggtgaggcccgagtctcagagcctcgatacccaagcactgccacggagggctcctgctctgccaagcctcggggactggtgtctaagacaaccgtgggaaccactgtgacgggagaaaccgctggcgcctagtgcatgcgcattggctaagccgactcacgctccactcctgacagataggctgcgtcccctttaaatatcgccaccgccgcgcggcggccgcgatgctcctgctgccgctccggcgtcggctgtgtcctgggtcctgtttggggcggcgtgggagcgggggccgcgggtgtctcgtcgtgtcacaggcccaaacccccagggctcctgtcctcaggacctgcttgagcggatttccagcgagggagggggagcttcaggacgcctgctgtgtgctccggactccggttgagatcccattctggccccctccgagtgacataggatgggctcaccacatctggtcaggccggcagggcctcgctgcagcacacaatgaccccataggtctcaaggcctagtgtcaga-gcaaattcaccgatccatcagccctctgcctccctcctcatttgaaagagcagtggcctgccccgcttgtaaaagcccaggggttccggaaagccgaacgcgctttacaggacaactgcaaagaggaacagaggcgaaactcagggggagaccatgtgaccacgcgtggcactggccaatcccacagcagttggtgttaatgtgtgtcaccggaggcatacggggcgacggcgaaacgaagggtggggtccagggatatgccggtggaagggggaaacgggtgacatttccgtcaacgccaaggaaaaacaaacaacacctgggaaccgtggggtagg--ggggcctcctgtgcctgacccaagccacgttttcaaatgcctaccagaggagcaaagaggtttctgccaatttcgcaacacccccaatcctccaccgacctggtagccctgacgcaacttcGGCTGGTACAAACCCACagagagtgggaaagaaacacacagagagtgagagacagagagagaagagagaatgggagacacacacacag--------------acacacacgcacacacacgcaGAGTcatacagcagaggcattgaaacacacacccccaggcaacccctgaggatccggggttctgctctggaggagaacgaccctcgggtgagagagcagccgaggggcacgcaggccgacccgtcctcgagatcacggacggcggcacgacttttggtgagactcaccccaaccaacaccgtccgtgcaggcctgaggctgggatcccgtgctgcttcccccgtctccgcctggggtttcatcatcatggtcggccctttgcgactgctgtcatcaggagaggttcccttcgacctcgtggaaaggtgaggccggagcctcagagcctcgatacccaagcactgccacggagggctcctgctctgccaagcctcggggactagtgtctaagacacccgtgggaaccactgtgaagggagaaaccgctggcgcctagcgcatgcgcattggctgagccgactcacgctccactcctgacagataggctgcgtcccctttaaatatcgccaccgccgcgcggcggccgcgatgctcctgctgccgccccggcagcgcctgtgtcttgggtcctgttacaggcggcgtgggagagggggccacgggtgtctgttcctgtcccaggcccaaacccccagggctcctgtcctcaggacctgcttcagccgacttccaccaagggagggggagcttcaggacgcctgctgtgttctctggactcccgttgagatcccattctggccccctccgagtgacataggatgggctcaccacacgtgatcaggccggcagggcctcgctgcagcacaaaatgatcccataggtctcaaggcctagtgtcaga-gcaaattcactcatccatcagccctctgcctccctcctcctttgaaagagcagtggcctaccccgcttgtaaaagcccaggggttccggaaagccgactgtgcttaacaggacaactgcaaagaggaagagaggcgaaatccagggggagaccatgtgaccacgcgtggcactggccaatcccacagcagttggtgttaacgtgtgacaccggaggcaaacggggcgacggcgaaacgaagggtggggtccatgcacgtgccgggggaagggggaaacggctgacctttccgtcaatgccaaggaaaatcaaacaacacctgggacccggagggtgtgggggacgtctgtgcctgacccaagccacgttttcaaatgcctaccagaggaacaaagatgtttctgccaattttgcaacaaccccaatcctccaccgacctcgtagccctgaagcaacttcggctggcaaaaacccaCAAagagtgggaaagaaacacacagagactgagagacagagggagaagagagaatgggagacaaacacacagacacacacacacacacgcaGAGTcatac s panTro4.chr4_GL389869_random 42180 2675 + 69473 gagagcagcccaggggcacgcaggccgacgggtcagcgagatcacgga-ggcggcacgacttttggggagactcaccccaaccaacaccgtccgtgcaggcctgaggctgggatcccatgctgcttcccctggctccgcctgggttttcatcatcatggtcggccctttgggactcctggcatcagcagacgttgccttccaccccgtggagaggtgaggccttagcttcagagcctcgacacccaagcactgccatggaggtcttctgctctgccaagcctcggggactggtttctaagacaaccgtgggaaccactgtgacgggagaaaccgttcgtgcctcgcgcatgcgcattggctgagccgattcgcgctccactcctgacagataggctgcgtcccctttaaatatcgccactgccgagcggcggccgtgatgctcctgctgctgccgcggcggcggctggatcttgggtcctgtttggggcggtgttggagaggggggcgcgggtgtctagtcctgttccaggctcaaacccccaggggtcctgtcctcagcagctgcttgaccccacttccaccgagggagggggagcttcaggatgcctgttgtgttctccggactcccgttgagatccgattttggccctctccgagtgagacaggatgggctcaccatatctggtcaggccggcagtgcctggctgcagcacagaatgatcccataggtctcaagtcctagtgtcagctgcaaattcactcatccatcaaccccctgcctccctcctcctttgaaagagcagtggcctgcctggcttttaagagccctggggttccggaaagccgaccgcgctttacaagacacctgcaatgaggaacacaggcgaatccgagggggtgaccatgtgaccacaggtggcactgcctaatcccacagcagttggtgttaatgtgtgtcaccggaggcatacgaggcgaagacgaaacaaagggtggtgtccaggtatgtgtccgtggaagagggaaacggctgacctttccatcaatgccaaggaaaatccaagaacacctgggacacgggggttggggcggggcctcttgtgcctgacccaagacacgttttcaaatgcctaccagaggagcaaagaggtttctgcaaaattcacaacacccccaatccttcaccgacctggtagccctgacgcaacttcggctggcacaaacccaTagacagtgggaaagaaatacagagagactgagagacagagagagaagagagaATGGAAGacacacacacagtcaactacacacacacacacacacacacacacacaGAGTCATACAGCAGAG---------------------------------------------------------------------------gagagcagcccaggggcacgcaggccgacccgtcctcgagatcatgga-ggcggcacgacttttggggagactcacccccaccaacaccgtccgtgtaggcctgtggctgggatcccgtgctgcttgccccgtctccgcctggggtttcatcatcatggtcggccctttgcgactcctggcatccggagacattcccttcgaccccgtggagaggtgaggccttagcctcagagcctcgacacccaagcactgccacggagggctcctgctctgccaagcctcggggactggtttctaagacaaccgtgggaaccattgtgacgggagaaaccgttcgcaactcacacatgcgcattggctgagccgattcgcgctccactcctgacagataggctgcgtcccctttaaatatcgccaccgatgcccggcggccgtgatgctcctgctgccgccgcggcggcggctggatcctgggtcctctttggcgcggcgtgggagagggggccgcgggtgtctcgtcctgtcccaggcccaaacccccaggggtcctgtcctcaggagctgcttgagcccactttcaccgagggagggggagctccaggacgccggctctgttctccggactctcgttgtgttcccattttggccctctccgagtgagtgagtatgcgctcaccacatctggtcagggcggcagggtctggctgcagcacagaatgatcccataggtctcaaggcctagtgtcagctgcaaattcactcatccatcagccctctgcctccctcctcctttgaaagagcagtggcctacacggcttgtaaaagccctggcgttccggaaagccgaccgcgctttacagtacacctgcaatgaggaacacaggcgaatcggagggggtgaccaagtgaccagaggtggcactggccaatcccacagcagttggtgttaatgtgtgtcacaggaggcatacggggcgacggcgaaacaaagggtggtgtccagctatgtgcccgtggaagggggaaacggctgacctttccatcaatgccaaggaaaatcaaagaacacctgggacacgggggttgggggggcctcttgtgcctgacccaagacacgttttcaaatgcctaccagaggagcaacgaggtttctgcagaattcgcaacacccccaatccttcaccgacctggtagccctgacgcaacttcggctggcacaaacccaCagacagtgggaaagaaatacagagagactgagagacagagagagaagagagaatgggagacacacacacagtcacctacacacacacacacacacacac i panTro4.chr4_GL389869_random I 9 I 28 a score=0.000000 s hg38.chrUn_KI270754v1 17619 83 + 40191 agcagaggcattgaaacacacacacccaggcaacccctgaggctccggggttctgctctggaggagaacgaccctcgggtgag e panTro4.chr4_GL389869_random 44855 28 + 69473 I a score=101520.000000 s hg38.chrUn_KI270754v1 17702 1319 + 40191 agagcagcccaggggcacgcaggccgacccgtcctcgagatcacggacagcggcgcgacttttggcgagagtcacgccaacaaacaccgtccgtgcaggcctgaggctgggatcccgtgctgcttccccggtatccacctggggtttcatcttcatagtcggccctttgcgactgctggcatcaggagagtttcccttcgagcccgtggagaggtgagaccggagcctcagagcctcgatacccaagcactgccacggagggctcctgctctgcaaagcctcggggactggtttctaagacaaccgtgggaaccactgcgacccgagaaaacgctggggcctcgcgcatgcgcattggctgagccgactcatgctccactcctgacagataggctgcgacccctttaaatattgccaccgccgcgcggcggccgcgatgctcctgctgccgccgcggcggcggctgtgtcctgggtcctgtttggggcggcatgggagaggggaccgcgggtgtctcgtcctgtcccaggcccaaacccccagggctcctgtcctcaggacctgcttgagccgacttccaccaagggagggggagcttcaggacgcctgctgtgttctctggactcccgttgagatcccattctggccccctccgagtgacataggatgggctcaccacatctggtcagtccggcagggcctcgctgcagcacacaatgaccccataggtctcaaggcctagtgtcaga-gcaaattcactcatccatcagccctctgcctccctcctcctttgaaagtgcagtggcctgccgcgcttgtaaaagcccaggggttccggaaagccgaacgcgctttacaggacaactgcaaagaggaacagaggcgacacccagggggagaccatgtgaccacgcgtggcactggctaatcccacagcagttggtgttaatgtgtgtcaccggaggcatacggggcgacggcgaaacgaagggtggggtccatgcatatgccggtggaagggggaaacgggtgacatttccgtcagtgccaaggaaaatcaaaccacacctgggaaccgggaggtgggggtgccgactgtgcctgacccaagccacgttttcaaatgcctaccagaggagcaaagaggtttctgccaatttcgcaacacccccaatcctccaccgacctggtagccctgacgcaacttcGGCTGGTACAAACCCACagagagtgggaaagaaacacacagagactgacagacagagagagaagagagaATGGGagacacacacacagacacacacacacacacacacgca s panTro4.chr4_GL389869_random 44883 1320 + 69473 agagcagcccaggggcacgcaggccgacccgtcatcgagatcacggacggcggcacgacttttggggagactcaccccaaccaacaccgtccgtgcaggcctgaggctggtatcccgtgctgcttcccccgtctccgcctggagtttcatcatcatggtcggcccattgcgactcctggcatccggagacgttcgcttcgaccccgtggagaggtgaggccttagcttcagagcatcgacacccaagcactgtcatggggggctcctgctctgccaagcctcggggcctggtatctgagacaaccgtgggaaccactgtgacaggagaaaccgttcgcgactcgcgtatgcgcattggctgagccgattcgcgctccactcctgacagataggctgtgtcccctttaaatatcgccacagccgcgcggcggccgtgatgctcctgctgccgccacggcggcggctggatcctgggtcctgtttcgggcggcgtgggagagggggccgcgggtgtctcgtcctgtcccaggcccaaacccccaggggtcctgtcctcaggagctgcttgagcccacttccaccgagggagggagagcttcaggacgcctgctgtgttctccggactcccgttgagatcccattttggccctctccgagtgagtcaggatgggctcaccacatctggtcagggcggcagggtctggctgcagcacagaatgatcccataggtctcaaggcctagtgtcagctgcaaattcactcatccatcagccctctgcctccctcctcctttgaaagagcagtggcctacgcggcttgtaaaagtcctggcgttccggaaagccgaccgcgctttacaagacacctgcaatgaggaacacaggcgaatccgaggggctgaccatgtgaccagaggtggcactggccaatcccacagcagttggtgttaatgtgtgtcaccggaggcatatggggcgatggcgaaacaaagggtggtgtccaggtatgtgcctgtggcagggggaaacggctgacctttccatcaatgccaaggaaaatcaaagaacacctgggacacgggggttgggggggcctcttgtgcctgacccaagacaggttttcaaatgcctaagagaggagcaaagagttttctgcaaaattcgcaacacccccaatccttcaccgacctggtagccctgacgcaacttcggctggcacaaacccaCagacagtgggaaagaaatacagagagactgagagacagagagagaagagagaATGGGacacacacacacagtcacctacacacacacacacaca i panTro4.chr4_GL389869_random I 28 I 27 a score=0.000000 s hg38.chrUn_KI270754v1 19021 89 + 40191 gaTTcatacagcagaggcattgaaacacacaccccaggcagcccctgaggctccggggttctgctctggaggagaacgaccctcgggtg e panTro4.chr4_GL389869_random 46203 27 + 69473 I a score=57470.000000 s hg38.chrUn_KI270754v1 19110 749 + 40191 agagagcagcccaggggcacgcagcccgacacgtcctcgagatcacggacagcggaaaggcttttggcgagactcaccccaacaaacaccgtccgtgcaggcctgaggctgggatcccgtgctgcttcccccgtctccgcctggggtttcatcatcatggtcggccctttgcgactgctgtcattaggagaggttcccttcgacgccgtggagaggtgaggccggagtctcagagcctcgatacccaagcactgccacggagggctcctgctctgccaagcctcggggactggtgtctaagacaacagtgggaaccactgtgacgggagaaaccgctggcgcctcacgcatgtgcattggctgaggcgactcacgctccactcctgacagataggctgcgtcccctttaaatatcgccaccgccgcgcggcggccgcgatgctcctgctgccgccccggcgtcggctgtgtcctgggtcctgtttggggcggcgtgggagcgggggccgcgggtgtctcgtcgtgtcacaggcccaaacccccagggctcctgtcctcaggacctgcttgagccgatttccagcgagggagggggagcttcaggacgcctgctgtgtgctccggactcccgttgagatcccattctggccccctccgagtgacataggatgggctcaccacatctggtcaggccggcagggcctcgctgcagcacacaatgaccccataggtctcaaggcctagtgtca- s panTro4.chr4_GL389869_random 46230 749 + 69473 Ggagagcagcccaggggcacgcaggccgacccgtcatcgagatcacggacggccacacgacttttggggagactcacccccaccaacaccgtccgtgcaggcctgaggctgggatcccgtgctgctt-ccccgtctccgcctggggtttcatcatcatgatcggccctttgctacgcctgtcatccggagacgttccctttgaccccgtggagaggtgaggccttagcctcagagcctcgacacccaagcactgccacggagggctcctgctctgccaagccacggttcctggtgtctaagacaaccttgggaaccactgtgacgggtgaaaccgttcgcgcctcgcgcatgcgcattggctaagccgattcgcgctgcagtgctgacagataggctgcgtcccctttaaatatcgccaccgacgcgcggcgaccgtgatgctcctgctgccgccccggtggcggatggatcctgggtcctgtttggcacggcgtgggagagggggccgcgggtgtctcgtcctgtcccaggcccaaacccccagggatcctgtcctgaggagctgcttgagcccacttccaccgagggagggggagcttcaggacccctgctgtgttctccggactcccgttgagatcccattttggccttctccgagtgagacaggatgggctcaccacatctggtcaggccggcagggcctggctgcagcacagaatgatgccatagatctcaaggccttgtgtcag i panTro4.chr4_GL389869_random I 27 C 0 a score=300.000000 s hg38.chrUn_KI270754v1 19859 1 + 40191 c s panTro4.chr4_GL389869_random 46979 1 + 69473 c i panTro4.chr4_GL389869_random C 0 C 0 s gorGor3.chr9 77765955 1 - 121947112 c i gorGor3.chr9 N 0 I 1070 a score=75845.000000 s hg38.chrUn_KI270754v1 19860 1061 + 40191 aggaaattcaccgatccatcagccctctgcctccctcctcctttgaaagactagtggcctgccccgcttgtaaaagcccaggggttccggaaagccgaacgcgcattacaggacaactgcaaagacgaacagaggcgaaacccagggggagaccatgtgaccacgcgtggcactggccaatcccacagcagttggtgttaatgtgtgtcaccggaggcatatggggcgacggcgaagcgaagggtggggtccaggcatatgccggtggaagggggaaacgggtgacatttccgtcaatgccaaggaaaatcaaacaacacctgagaaccgtggggta-gggggcctcctgtgcctgacccaagccacgttttcaaatgcctaccagaggagcaaagaggtttctgccaatttcgcaacacccccaatcctccaccgacctggtagccctgacgcaacttcGGCTGGTACAAACCCACagagagtgggaaagaaacacacagagagtgagagacagagagagaagagagaatgggagacacacacacagacacacacgcacacacacgcaGAGTCATACAGCAGAGGCATTGAACCCTGAGA-ACcctgaggcaacccctgaggatccggggttctgctctggaggagaacgaccctcgggtgagagagcagcccaggagcacgcaggccgacccgtcctcgagatcacggacagcggtaaggcttttggcgagactcaccccaaccaacaccgtccgtgcaggactgaggctgggatcccgtgctgcttcccccgtctccgcctggggtttcatcatcatggtcggccctttgcgactgctgtcatcaggagaggttcccttcgaccccgtggggaggtgagaccggagcctcagagcctcgatacccaagcactgccacggagggctcctgctctgcaaagcctcggggactggtttctcagacaaccgtgggaaccactgtgaccggagaacccgctggggcctcgcgcatgcgcattggctgagccgactcacgctccactcctgacagataggctgcgt s panTro4.chr4_GL389869_random 46980 1056 + 69473 tgcaaattcactcatccatcagccctctgcctccctcctcctttgaaggagcattggcctgcccggcttgtaaaagccctggggttccggacagccgaccgcgctttacaggacacctgcaatgaggaacacaggtgaatccgagggggtgaccatgtgaccacgcgtggcactggccaatctcacagcagttggtcttaatgtgtgtcaccggaggcatacggggcggcggcgaaacaaagggtggtgtccaggtgtgtgccggtggaagggttaaacggctgacctttccatcaatgccaaggaaaatcaaagaacacctgggacccgggtgttgtgggggccgcctgtgcctgacccaagccacgtttccaaatgcctaccagagaagcaaagagggttctgcaaaattcgccacacccccgatcctccatcaacctggtagccctgacgcaacttcGGCTGGCACAAACCTACAGACAGTGGGAAAGAAACACACAGAGACTGAGAGACAGAGAGAGAAGAGAGAATGTGAGACTcacacacagacaca----cacacacacgcaGAGTCATGCAGCAGAGGCATTgaaac---acacacccctaggcaccccctgagtctgcggagttctgctctggaggagatcgaccctcggatgagagagcagcccaggggcacgcaggccgacctgtcctcgagatcatggatggcggcgcgacttttgtggagactcacccctaccaacaccgtccgggcaggcctgaggctgggatcccgtgctacttccccaatccccgcctgtggtttcctcatcgtggtcggcactttgcgactcctggcatccggagacgttcctgtcgaccccgtggagagttcagggcggagcctcagagccccgacacccatgcactgccacggaaggttgctgctttgccaagcctcggggactggtttctaagacaaacttgggaaccactgtgatgggggaagccgctcgcgcgtcgcgcatgcgtattggctgggctgtctcgtgctcttctcctggcagtcaggctgtgt i panTro4.chr4_GL389869_random C 0 C 0 e gorGor3.chr9 77765956 1070 - 121947112 I a score=300.000000 s hg38.chrUn_KI270754v1 20921 1 + 40191 c s panTro4.chr4_GL389869_random 48036 1 + 69473 c i panTro4.chr4_GL389869_random C 0 C 0 s gorGor3.chr9 77767026 1 - 121947112 c i gorGor3.chr9 I 1070 I 27 a score=2357.000000 s hg38.chrUn_KI270754v1 20922 27 + 40191 ccctttaaatatcgccaccgccgcgcg s panTro4.chr4_GL389869_random 48037 27 + 69473 ccctttaaataccgccaccgccgcgca i panTro4.chr4_GL389869_random C 0 C 0 e gorGor3.chr9 77767027 27 - 121947112 I a score=600.000000 s hg38.chrUn_KI270754v1 20949 2 + 40191 gc s panTro4.chr4_GL389869_random 48064 2 + 69473 gc i panTro4.chr4_GL389869_random C 0 C 0 s gorGor3.chr9 77767054 2 - 121947112 gc i gorGor3.chr9 I 27 I 95 a score=6297.000000 s hg38.chrUn_KI270754v1 20951 95 + 40191 ggccgcgatgctcctgctgccgccccggcgtcggctgtgtcctgggtcctgtttggggcggcatgggagaggggaacgcgggtgtctcgtcctgt s panTro4.chr4_GL389869_random 48066 95 + 69473 tgcggcgaggttcctcctgcccccgctgcggcggctggatccagggtcctgtttggggcggcatgggagaggggcccgcgggtgtcttgtcctgt i panTro4.chr4_GL389869_random C 0 C 0 e gorGor3.chr9 77767056 95 - 121947112 I a score=300.000000 s hg38.chrUn_KI270754v1 21046 1 + 40191 c s panTro4.chr4_GL389869_random 48161 1 + 69473 c i panTro4.chr4_GL389869_random C 0 C 0 s gorGor3.chr9 77767151 1 - 121947112 c i gorGor3.chr9 I 95 N 0 a score=15766.000000 s hg38.chrUn_KI270754v1 21047 216 + 40191 ccaggcccaaacccccagggctcctgtcctcaggacctgcttgagccgacttccaccaagggagggggagcttcaggacgcctgctgtgttctctggactcccgttgagatcccattctggccccctccgagtgacataggatgggctcaccacatgtggtcaggccggcagggcctcgctgcagcacacaatgaccccatagttctcaaggccta s panTro4.chr4_GL389869_random 48162 216 + 69473 ccagggccaaacccccaggagtcctgtcctcagaacctccttttgcctactttcaccgagggagggggagcttcaggatgcctgctgtgttctccggactccggttcagatccgaatttggacccctccgagtgagataggatgggctcaccgcatctggtgaggcaggcagggcctcgctgcagcacagaatgatcccctaggtctcaAGGCCTA i panTro4.chr4_GL389869_random C 0 N 0