0 nestedRepeats,237 0.01 cpgIslandExt,473 cpgIslandExtUnmasked,476 cpgIslandSuper,473 0.0f cpgIslandExt,449 cpgIslandExtUnmasked,452 cpgIslandSuper,449 0.1f cpgIslandExt,451 cpgIslandExtUnmasked,454 cpgIslandSuper,451 0.2 augustusGene,136 0.5 augustusGene,138 mrna,425 xenoRefGene,264 0.6 cpgIslandExt,276 cpgIslandExtUnmasked,279 cpgIslandSuper,276 1 augustusGene,310 chainCalJac3,394 chainCalJac3,525 chainCalJac3,717 chainCalJac3,1116 chainGorGor3,391 chainGorGor3,522 chainGorGor3,714 chainGorGor3,1113 chainMm10,391 chainMm10,522 chainMm10,714 chainMm10,1113 chainNetCalJac3,397 chainNetCalJac3,528 chainNetCalJac3,720 chainNetCalJac3,1119 chainNetGorGor3,394 chainNetGorGor3,525 chainNetGorGor3,717 chainNetGorGor3,1116 chainNetMm10,394 chainNetMm10,525 chainNetMm10,717 chainNetMm10,1116 chainNetTarSyr2,394 chainNetTarSyr2,525 chainNetTarSyr2,717 chainNetTarSyr2,1116 chainTarSyr2,391 chainTarSyr2,522 chainTarSyr2,714 chainTarSyr2,1113 cpgIslandExt,245 cpgIslandExt,429 cpgIslandExt,458 cpgIslandExt,485 cpgIslandExtUnmasked,248 cpgIslandExtUnmasked,432 cpgIslandExtUnmasked,461 cpgIslandExtUnmasked,488 cpgIslandSuper,245 cpgIslandSuper,429 cpgIslandSuper,458 cpgIslandSuper,485 ensGene,200 ensGene,202 ensemblGeneScaffold,139 ensemblGeneScaffold,141 genscan,227 mrna,509 netCalJac3,394 netCalJac3,525 netCalJac3,717 netCalJac3,1116 netGorGor3,391 netGorGor3,522 netGorGor3,714 netGorGor3,1113 netMm10,391 netMm10,522 netMm10,714 netMm10,1113 netTarSyr2,391 netTarSyr2,522 netTarSyr2,714 netTarSyr2,1113 xenoRefGene,387 100 augustusGene,134 chainCalJac3,1084 chainGorGor3,1081 chainMm10,1081 chainNetCalJac3,1087 chainNetGorGor3,1084 chainNetMm10,1084 chainNetTarSyr2,1084 chainTarSyr2,1081 gap,137 microsat,70 nestedRepeats,230 netCalJac3,1084 netGorGor3,1081 netMm10,1081 netTarSyr2,1081 100.0 cpgIslandExt,474 cpgIslandExtUnmasked,477 cpgIslandSuper,474 1000 chainCalJac3,756 chainGorGor3,753 chainMm10,753 chainNetCalJac3,759 chainNetGorGor3,756 chainNetMm10,756 chainNetTarSyr2,756 chainTarSyr2,753 nestedRepeats,238 netCalJac3,756 netGorGor3,753 netMm10,753 netTarSyr2,753 1000-2000 augustusGene,161 103-7 chainCalJac3,1117 chainGorGor3,1114 chainMm10,1114 chainNetCalJac3,1120 chainNetGorGor3,1117 chainNetMm10,1117 chainNetTarSyr2,1117 chainTarSyr2,1114 netCalJac3,1117 netGorGor3,1114 netMm10,1114 netTarSyr2,1114 10607616 nestedRepeats,394 rmsk,417 10973072 nestedRepeats,361 rmsk,384 11 chainCalJac3,713 chainCalJac3,720 chainGorGor3,710 chainGorGor3,717 chainMm10,710 chainMm10,717 chainNetCalJac3,716 chainNetCalJac3,723 chainNetGorGor3,713 chainNetGorGor3,720 chainNetMm10,713 chainNetMm10,720 chainNetTarSyr2,713 chainNetTarSyr2,720 chainTarSyr2,710 chainTarSyr2,717 netCalJac3,713 netCalJac3,720 netGorGor3,710 netGorGor3,717 netMm10,710 netMm10,717 netTarSyr2,710 netTarSyr2,717 111 chainCalJac3,715 chainCalJac3,721 chainGorGor3,712 chainGorGor3,718 chainMm10,712 chainMm10,718 chainNetCalJac3,718 chainNetCalJac3,724 chainNetGorGor3,715 chainNetGorGor3,721 chainNetMm10,715 chainNetMm10,721 chainNetTarSyr2,715 chainNetTarSyr2,721 chainTarSyr2,712 chainTarSyr2,718 netCalJac3,715 netCalJac3,721 netGorGor3,712 netGorGor3,718 netMm10,712 netMm10,718 netTarSyr2,712 netTarSyr2,718 11484-9 chainCalJac3,1086 chainGorGor3,1083 chainMm10,1083 chainNetCalJac3,1089 chainNetGorGor3,1086 chainNetMm10,1086 chainNetTarSyr2,1086 chainTarSyr2,1083 netCalJac3,1086 netGorGor3,1083 netMm10,1083 netTarSyr2,1083 115-26 chainCalJac3,1048 chainGorGor3,1045 chainMm10,1045 chainNetCalJac3,1051 chainNetGorGor3,1048 chainNetMm10,1048 chainNetTarSyr2,1048 chainTarSyr2,1045 netCalJac3,1048 netGorGor3,1045 netMm10,1045 netTarSyr2,1045 11752248 ensGene,205 ensemblGeneScaffold,144 117900 chainCalJac3,737 chainCalJac3,749 chainGorGor3,734 chainGorGor3,746 chainMm10,734 chainMm10,746 chainNetCalJac3,740 chainNetCalJac3,752 chainNetGorGor3,737 chainNetGorGor3,749 chainNetMm10,737 chainNetMm10,749 chainNetTarSyr2,737 chainNetTarSyr2,749 chainTarSyr2,734 chainTarSyr2,746 netCalJac3,737 netCalJac3,749 netGorGor3,734 netGorGor3,746 netMm10,734 netMm10,746 netTarSyr2,734 netTarSyr2,746 118300 chainCalJac3,761 chainGorGor3,758 chainMm10,758 chainNetCalJac3,764 chainNetGorGor3,761 chainNetMm10,761 chainNetTarSyr2,761 chainTarSyr2,758 netCalJac3,761 netGorGor3,758 netMm10,758 netTarSyr2,758 11928468 chainCalJac3,1050 chainGorGor3,1047 chainMm10,1047 chainNetCalJac3,1053 chainNetGorGor3,1050 chainNetMm10,1050 chainNetTarSyr2,1050 chainTarSyr2,1047 netCalJac3,1050 netGorGor3,1047 netMm10,1047 netTarSyr2,1047 11932250 mrna,533 xenoRefGene,317 12 mrna,529 xenoRefGene,313 12111 chainCalJac3,723 chainGorGor3,720 chainMm10,720 chainNetCalJac3,726 chainNetGorGor3,723 chainNetMm10,723 chainNetTarSyr2,723 chainTarSyr2,720 netCalJac3,723 netGorGor3,720 netMm10,720 netTarSyr2,720 12529312 chainCalJac3,1119 chainGorGor3,1116 chainMm10,1116 chainNetCalJac3,1122 chainNetGorGor3,1119 chainNetMm10,1119 chainNetTarSyr2,1119 chainTarSyr2,1116 netCalJac3,1119 netGorGor3,1116 netMm10,1116 netTarSyr2,1116 127-163 genscan,206 13 chainCalJac3,1115 chainGorGor3,1112 chainMm10,1112 chainNetCalJac3,1118 chainNetGorGor3,1115 chainNetMm10,1115 chainNetTarSyr2,1115 chainTarSyr2,1112 netCalJac3,1115 netGorGor3,1112 netMm10,1112 netTarSyr2,1112 1300 chainCalJac3,757 chainGorGor3,754 chainMm10,754 chainNetCalJac3,760 chainNetGorGor3,757 chainNetMm10,757 chainNetTarSyr2,757 chainTarSyr2,754 netCalJac3,757 netGorGor3,754 netMm10,754 netTarSyr2,754 134-41 windowmaskerSdust,112 14500911 chainCalJac3,1088 chainGorGor3,1085 chainMm10,1085 chainNetCalJac3,1091 chainNetGorGor3,1088 chainNetMm10,1088 chainNetTarSyr2,1088 chainTarSyr2,1085 netCalJac3,1088 netGorGor3,1085 netMm10,1085 netTarSyr2,1085 14534192 augustusGene,340 14681350 mrna,515 15 microsat,30 microsat,79 microsat,130 simpleRepeat,90 windowmaskerSdust,109 xenoRefGene,236 152111 chainCalJac3,726 chainGorGor3,723 chainMm10,723 chainNetCalJac3,729 chainNetGorGor3,726 chainNetMm10,726 chainNetTarSyr2,726 chainTarSyr2,723 netCalJac3,726 netGorGor3,723 netMm10,723 netTarSyr2,723 15608248 xenoRefGene,393 16 nestedRepeats,357 rmsk,380 16287941 windowmaskerSdust,114 17 cpgIslandExt,241 cpgIslandExtUnmasked,244 cpgIslandSuper,241 18218656 augustusGene,315 19 augustusGene,335 196 cpgIslandExt,619 cpgIslandExtUnmasked,622 cpgIslandSuper,619 1987 cpgIslandExt,379 cpgIslandExt,616 cpgIslandExtUnmasked,382 cpgIslandExtUnmasked,619 cpgIslandSuper,379 cpgIslandSuper,616 1996 nestedRepeats,410 rmsk,433 1996-2010 nestedRepeats,334 rmsk,357 1997 genscan,149 genscan,223 1998 genscan,167 genscan,204 1999 microsat,103 microsat,128 nestedRepeats,388 rmsk,411 simpleRepeat,65 simpleRepeat,88 2 augustusGene,142 augustusGene,337 chainCalJac3,428 chainCalJac3,433 chainCalJac3,718 chainGorGor3,425 chainGorGor3,430 chainGorGor3,715 chainMm10,425 chainMm10,430 chainMm10,715 chainNetCalJac3,431 chainNetCalJac3,436 chainNetCalJac3,721 chainNetGorGor3,428 chainNetGorGor3,433 chainNetGorGor3,718 chainNetMm10,428 chainNetMm10,433 chainNetMm10,718 chainNetTarSyr2,428 chainNetTarSyr2,433 chainNetTarSyr2,718 chainTarSyr2,425 chainTarSyr2,430 chainTarSyr2,715 cpgIslandExt,421 cpgIslandExt,426 cpgIslandExt,428 cpgIslandExt,434 cpgIslandExt,460 cpgIslandExt,475 cpgIslandExt,620 cpgIslandExtUnmasked,424 cpgIslandExtUnmasked,429 cpgIslandExtUnmasked,431 cpgIslandExtUnmasked,437 cpgIslandExtUnmasked,463 cpgIslandExtUnmasked,478 cpgIslandExtUnmasked,623 cpgIslandSuper,421 cpgIslandSuper,426 cpgIslandSuper,428 cpgIslandSuper,434 cpgIslandSuper,460 cpgIslandSuper,475 cpgIslandSuper,620 microsat,66 microsat,132 netCalJac3,428 netCalJac3,433 netCalJac3,718 netGorGor3,425 netGorGor3,430 netGorGor3,715 netMm10,425 netMm10,430 netMm10,715 netTarSyr2,425 netTarSyr2,430 netTarSyr2,715 simpleRepeat,92 windowmaskerSdust,111 20 chainCalJac3,1085 chainGorGor3,1082 chainMm10,1082 chainNetCalJac3,1088 chainNetGorGor3,1085 chainNetMm10,1085 chainNetTarSyr2,1085 chainTarSyr2,1082 cpgIslandExt,618 cpgIslandExtUnmasked,621 cpgIslandSuper,618 netCalJac3,1085 netGorGor3,1082 netMm10,1082 netTarSyr2,1082 200 cpgIslandExt,271 cpgIslandExtUnmasked,274 cpgIslandSuper,271 2000 nestedRepeats,63 nestedRepeats,355 rmsk,99 rmsk,378 2002 chainCalJac3,1047 chainGorGor3,1044 chainMm10,1044 chainNetCalJac3,1050 chainNetGorGor3,1047 chainNetMm10,1047 chainNetTarSyr2,1047 chainTarSyr2,1044 ensGene,47 ensGene,198 ensemblGeneScaffold,92 ensemblGeneScaffold,137 mrna,527 netCalJac3,1047 netGorGor3,1044 netMm10,1044 netTarSyr2,1044 xenoRefGene,311 2003 augustusGene,333 chainCalJac3,1081 chainCalJac3,1113 chainGorGor3,1078 chainGorGor3,1110 chainMm10,1078 chainMm10,1110 chainNetCalJac3,1084 chainNetCalJac3,1116 chainNetGorGor3,1081 chainNetGorGor3,1113 chainNetMm10,1081 chainNetMm10,1113 chainNetTarSyr2,1081 chainNetTarSyr2,1113 chainTarSyr2,1078 chainTarSyr2,1110 gap,16 gold,18 netCalJac3,1081 netCalJac3,1113 netGorGor3,1078 netGorGor3,1110 netMm10,1078 netMm10,1110 netTarSyr2,1078 netTarSyr2,1110 2004 mrna,507 2005 xenoRefGene,385 2006 windowmaskerSdust,107 2007 chainCalJac3,1020 chainGorGor3,1017 chainMm10,1017 chainNetCalJac3,1023 chainNetGorGor3,1020 chainNetMm10,1020 chainNetTarSyr2,1020 chainTarSyr2,1017 netCalJac3,1020 netGorGor3,1017 netMm10,1017 netTarSyr2,1017 2008 augustusGene,308 2009 chainCalJac3,5 chainCalJac3,68 chainCalJac3,309 chainNetCalJac3,6 chainNetCalJac3,71 chainNetCalJac3,312 chainNetCalJac3Viewchain,4 chainNetCalJac3Viewnet,4 netCalJac3,5 netCalJac3,68 netCalJac3,309 2011 chainGorGor3,5 chainGorGor3,67 chainGorGor3,307 chainMm10,5 chainMm10,67 chainMm10,307 chainNetGorGor3,6 chainNetGorGor3,70 chainNetGorGor3,310 chainNetGorGor3Viewchain,4 chainNetGorGor3Viewnet,4 chainNetMm10,6 chainNetMm10,70 chainNetMm10,310 chainNetMm10Viewchain,4 chainNetMm10Viewnet,4 netGorGor3,5 netGorGor3,67 netGorGor3,307 netMm10,5 netMm10,67 netMm10,307 2013 chainNetTarSyr2,6 chainNetTarSyr2,70 chainNetTarSyr2,310 chainNetTarSyr2Viewchain,4 chainNetTarSyr2Viewnet,4 chainTarSyr2,5 chainTarSyr2,67 chainTarSyr2,307 mrna,482 netTarSyr2,5 netTarSyr2,67 netTarSyr2,307 2014 xenoRefGene,352 2111 chainCalJac3,722 chainGorGor3,719 chainMm10,719 chainNetCalJac3,725 chainNetGorGor3,722 chainNetMm10,722 chainNetTarSyr2,722 chainTarSyr2,719 netCalJac3,722 netGorGor3,719 netMm10,719 netTarSyr2,719 217900 chainCalJac3,738 chainCalJac3,750 chainGorGor3,735 chainGorGor3,747 chainMm10,735 chainMm10,747 chainNetCalJac3,741 chainNetCalJac3,753 chainNetGorGor3,738 chainNetGorGor3,750 chainNetMm10,738 chainNetMm10,750 chainNetTarSyr2,738 chainNetTarSyr2,750 chainTarSyr2,735 chainTarSyr2,747 netCalJac3,738 netCalJac3,750 netGorGor3,735 netGorGor3,747 netMm10,735 netMm10,747 netTarSyr2,735 netTarSyr2,747 218300 chainCalJac3,762 chainGorGor3,759 chainMm10,759 chainNetCalJac3,765 chainNetGorGor3,762 chainNetMm10,762 chainNetTarSyr2,762 chainTarSyr2,759 netCalJac3,762 netGorGor3,759 netMm10,759 netTarSyr2,759 22 windowmaskerSdust,110 22900 chainCalJac3,735 chainCalJac3,747 chainGorGor3,732 chainGorGor3,744 chainMm10,732 chainMm10,744 chainNetCalJac3,738 chainNetCalJac3,750 chainNetGorGor3,735 chainNetGorGor3,747 chainNetMm10,735 chainNetMm10,747 chainNetTarSyr2,735 chainNetTarSyr2,747 chainTarSyr2,732 chainTarSyr2,744 netCalJac3,735 netCalJac3,747 netGorGor3,732 netGorGor3,744 netMm10,732 netMm10,744 netTarSyr2,732 netTarSyr2,744 23193287 mrna,489 23300 chainCalJac3,759 chainGorGor3,756 chainMm10,756 chainNetCalJac3,762 chainNetGorGor3,759 chainNetMm10,759 chainNetTarSyr2,759 chainTarSyr2,756 netCalJac3,759 netGorGor3,756 netMm10,756 netTarSyr2,756 24 augustusGene,311 24259432 xenoRefGene,359 25 genscan,225 xenoRefGene,271 252111 chainCalJac3,727 chainGorGor3,724 chainMm10,724 chainNetCalJac3,730 chainNetGorGor3,727 chainNetMm10,727 chainNetTarSyr2,727 chainTarSyr2,724 netCalJac3,727 netGorGor3,724 netMm10,724 netTarSyr2,724 261-82 cpgIslandExt,621 cpgIslandExtUnmasked,624 cpgIslandSuper,621 268 genscan,226 27 microsat,131 simpleRepeat,91 2900 chainCalJac3,734 chainCalJac3,746 chainGorGor3,731 chainGorGor3,743 chainMm10,731 chainMm10,743 chainNetCalJac3,737 chainNetCalJac3,749 chainNetGorGor3,734 chainNetGorGor3,746 chainNetMm10,734 chainNetMm10,746 chainNetTarSyr2,734 chainNetTarSyr2,746 chainTarSyr2,731 chainTarSyr2,743 netCalJac3,734 netCalJac3,746 netGorGor3,731 netGorGor3,743 netMm10,731 netMm10,743 netTarSyr2,731 netTarSyr2,743 2n cpgIslandExt,487 cpgIslandExtUnmasked,490 cpgIslandSuper,487 3 augustusGene,140 chainCalJac3,440 chainCalJac3,719 chainGorGor3,437 chainGorGor3,716 chainMm10,437 chainMm10,716 chainNetCalJac3,443 chainNetCalJac3,722 chainNetGorGor3,440 chainNetGorGor3,719 chainNetMm10,440 chainNetMm10,719 chainNetTarSyr2,440 chainNetTarSyr2,719 chainTarSyr2,437 chainTarSyr2,716 cpgIslandExt,432 cpgIslandExt,462 cpgIslandExtUnmasked,435 cpgIslandExtUnmasked,465 cpgIslandSuper,432 cpgIslandSuper,462 microsat,68 netCalJac3,440 netCalJac3,719 netGorGor3,437 netGorGor3,716 netMm10,437 netMm10,716 netTarSyr2,437 netTarSyr2,716 3.1 augustusGene,24 3.2 chainCalJac3,7 chainCalJac3,70 chainCalJac3,311 chainNetCalJac3,8 chainNetCalJac3,73 chainNetCalJac3,314 chainNetCalJac3Viewchain,6 chainNetCalJac3Viewnet,6 netCalJac3,7 netCalJac3,70 netCalJac3,311 30 chainCalJac3,1083 chainGorGor3,1080 chainMm10,1080 chainNetCalJac3,1086 chainNetGorGor3,1083 chainNetMm10,1083 chainNetTarSyr2,1083 chainTarSyr2,1080 ensGene,201 ensemblGeneScaffold,140 netCalJac3,1083 netGorGor3,1080 netMm10,1080 netTarSyr2,1080 300 cpgIslandExt,6 cpgIslandExtUnmasked,9 cpgIslandSuper,6 3000 chainCalJac3,691 chainMm10,688 chainNetCalJac3,694 chainNetMm10,691 chainNetTarSyr2,691 chainTarSyr2,688 netCalJac3,691 netMm10,688 netTarSyr2,688 317900 chainCalJac3,739 chainCalJac3,751 chainGorGor3,736 chainGorGor3,748 chainMm10,736 chainMm10,748 chainNetCalJac3,742 chainNetCalJac3,754 chainNetGorGor3,739 chainNetGorGor3,751 chainNetMm10,739 chainNetMm10,751 chainNetTarSyr2,739 chainNetTarSyr2,751 chainTarSyr2,736 chainTarSyr2,748 netCalJac3,739 netCalJac3,751 netGorGor3,736 netGorGor3,748 netMm10,736 netMm10,748 netTarSyr2,736 netTarSyr2,748 318300 chainCalJac3,763 chainGorGor3,760 chainMm10,760 chainNetCalJac3,766 chainNetGorGor3,763 chainNetMm10,763 chainNetTarSyr2,763 chainTarSyr2,760 netCalJac3,763 netGorGor3,760 netMm10,760 netTarSyr2,760 32 mrna,510 32111 chainCalJac3,724 chainGorGor3,721 chainMm10,721 chainNetCalJac3,727 chainNetGorGor3,724 chainNetMm10,724 chainNetTarSyr2,724 chainTarSyr2,721 netCalJac3,724 netGorGor3,721 netMm10,721 netTarSyr2,721 33 xenoRefGene,388 3300 chainCalJac3,758 chainGorGor3,755 chainMm10,755 chainNetCalJac3,761 chainNetGorGor3,758 chainNetMm10,758 chainNetTarSyr2,758 chainTarSyr2,755 netCalJac3,758 netGorGor3,755 netMm10,755 netTarSyr2,755 350 chainCalJac3,729 chainCalJac3,741 chainGorGor3,726 chainGorGor3,738 chainMm10,726 chainMm10,738 chainNetCalJac3,732 chainNetCalJac3,744 chainNetGorGor3,729 chainNetGorGor3,741 chainNetMm10,729 chainNetMm10,741 chainNetTarSyr2,729 chainNetTarSyr2,741 chainTarSyr2,726 chainTarSyr2,738 netCalJac3,729 netCalJac3,741 netGorGor3,726 netGorGor3,738 netMm10,726 netMm10,738 netTarSyr2,726 netTarSyr2,738 3656447 cpgIslandExt,623 cpgIslandExtUnmasked,626 cpgIslandSuper,623 38 gap,138 38-41 ensGene,203 ensemblGeneScaffold,142 39s ensGene,163 4 mrna,530 xenoRefGene,314 41 mrna,484 418-420 nestedRepeats,359 rmsk,382 42 xenoRefGene,354 425 chainCalJac3,730 chainCalJac3,742 chainGorGor3,727 chainGorGor3,739 chainMm10,727 chainMm10,739 chainNetCalJac3,733 chainNetCalJac3,745 chainNetGorGor3,730 chainNetGorGor3,742 chainNetMm10,730 chainNetMm10,742 chainNetTarSyr2,730 chainNetTarSyr2,742 chainTarSyr2,727 chainTarSyr2,739 netCalJac3,730 netCalJac3,742 netGorGor3,727 netGorGor3,739 netMm10,727 netMm10,739 netTarSyr2,727 netTarSyr2,739 450 chainCalJac3,731 chainCalJac3,743 chainGorGor3,728 chainGorGor3,740 chainMm10,728 chainMm10,740 chainNetCalJac3,734 chainNetCalJac3,746 chainNetGorGor3,731 chainNetGorGor3,743 chainNetMm10,731 chainNetMm10,743 chainNetTarSyr2,731 chainNetTarSyr2,743 chainTarSyr2,728 chainTarSyr2,740 netCalJac3,731 netCalJac3,743 netGorGor3,728 netGorGor3,740 netMm10,728 netMm10,740 netTarSyr2,728 netTarSyr2,740 484 gap,133 5 augustusGene,312 cpgIslandExt,464 cpgIslandExtUnmasked,467 cpgIslandSuper,464 5-base gc5Base,6 gc5Base,27 50 cpgIslandExt,265 cpgIslandExtUnmasked,268 cpgIslandSuper,265 nestedRepeats,229 5000 chainGorGor3,688 chainNetGorGor3,691 netGorGor3,688 573-80 microsat,133 simpleRepeat,93 57900 chainCalJac3,736 chainCalJac3,748 chainGorGor3,733 chainGorGor3,745 chainMm10,733 chainMm10,745 chainNetCalJac3,739 chainNetCalJac3,751 chainNetGorGor3,736 chainNetGorGor3,748 chainNetMm10,736 chainNetMm10,748 chainNetTarSyr2,736 chainNetTarSyr2,748 chainTarSyr2,733 chainTarSyr2,745 netCalJac3,736 netCalJac3,748 netGorGor3,733 netGorGor3,745 netMm10,733 netMm10,745 netTarSyr2,733 netTarSyr2,745 58300 chainCalJac3,760 chainGorGor3,757 chainMm10,757 chainNetCalJac3,763 chainNetGorGor3,760 chainNetMm10,760 chainNetTarSyr2,760 chainTarSyr2,757 netCalJac3,760 netGorGor3,757 netMm10,757 netTarSyr2,757 6 cpgIslandExt,466 cpgIslandExt,469 cpgIslandExt,477 cpgIslandExtUnmasked,469 cpgIslandExtUnmasked,472 cpgIslandExtUnmasked,480 cpgIslandSuper,466 cpgIslandSuper,469 cpgIslandSuper,477 nestedRepeats,391 nestedRepeats,412 nestedRepeats,413 rmsk,414 rmsk,435 rmsk,436 600 chainCalJac3,732 chainCalJac3,744 chainGorGor3,729 chainGorGor3,741 chainMm10,729 chainMm10,741 chainNetCalJac3,735 chainNetCalJac3,747 chainNetGorGor3,732 chainNetGorGor3,744 chainNetMm10,732 chainNetMm10,744 chainNetTarSyr2,732 chainNetTarSyr2,744 chainTarSyr2,729 chainTarSyr2,741 netCalJac3,732 netCalJac3,744 netGorGor3,729 netGorGor3,741 netMm10,729 netMm10,741 netTarSyr2,729 netTarSyr2,741 637-44 augustusGene,313 656-64 mrna,531 xenoRefGene,315 657-63 nestedRepeats,392 rmsk,415 669 gold,153 693 gap,134 7 cpgIslandExt,472 cpgIslandExt,480 cpgIslandExtUnmasked,475 cpgIslandExtUnmasked,483 cpgIslandSuper,472 cpgIslandSuper,480 72111 chainCalJac3,725 chainGorGor3,722 chainMm10,722 chainNetCalJac3,728 chainNetGorGor3,725 chainNetMm10,725 chainNetTarSyr2,725 chainTarSyr2,722 netCalJac3,725 netGorGor3,722 netMm10,722 netTarSyr2,722 735 gold,154 743-8 nestedRepeats,414 rmsk,437 750 chainCalJac3,753 chainGorGor3,750 chainMm10,750 chainNetCalJac3,756 chainNetGorGor3,753 chainNetMm10,753 chainNetTarSyr2,753 chainTarSyr2,750 netCalJac3,753 netGorGor3,750 netMm10,750 netTarSyr2,750 78-94 genscan,228 825 chainCalJac3,754 chainGorGor3,751 chainMm10,751 chainNetCalJac3,757 chainNetGorGor3,754 chainNetMm10,754 chainNetTarSyr2,754 chainTarSyr2,751 netCalJac3,754 netGorGor3,751 netMm10,751 netTarSyr2,751 843 gap,139 850 chainCalJac3,755 chainGorGor3,752 chainMm10,752 chainNetCalJac3,758 chainNetGorGor3,755 chainNetMm10,755 chainNetTarSyr2,755 chainTarSyr2,752 netCalJac3,755 netGorGor3,752 netMm10,752 netTarSyr2,752 8994846 nestedRepeats,416 rmsk,439 9 cpgIslandExt,482 cpgIslandExtUnmasked,485 cpgIslandSuper,482 nestedRepeats,358 nestedRepeats,390 rmsk,381 rmsk,413 900 chainCalJac3,733 chainCalJac3,745 chainGorGor3,730 chainGorGor3,742 chainMm10,730 chainMm10,742 chainNetCalJac3,736 chainNetCalJac3,748 chainNetGorGor3,733 chainNetGorGor3,745 chainNetMm10,733 chainNetMm10,745 chainNetTarSyr2,733 chainNetTarSyr2,745 chainTarSyr2,730 chainTarSyr2,742 netCalJac3,733 netCalJac3,745 netGorGor3,730 netGorGor3,742 netMm10,730 netMm10,742 netTarSyr2,730 netTarSyr2,742 9149143 genscan,230 96 mrna,432 9862982 microsat,135 simpleRepeat,95 a augustusGene,116 augustusGene,128 augustusGene,152 augustusGene,215 augustusGene,218 augustusGene,233 augustusGene,323 augustusGene,328 chainCalJac3,78 chainCalJac3,148 chainCalJac3,201 chainCalJac3,460 chainCalJac3,470 chainCalJac3,474 chainCalJac3,541 chainCalJac3,558 chainCalJac3,561 chainCalJac3,628 chainCalJac3,633 chainCalJac3,639 chainCalJac3,643 chainCalJac3,654 chainCalJac3,686 chainCalJac3,805 chainCalJac3,819 chainCalJac3,825 chainCalJac3,831 chainCalJac3,835 chainCalJac3,838 chainCalJac3,866 chainCalJac3,1056 chainCalJac3,1080 chainCalJac3,1096 chainGorGor3,76 chainGorGor3,146 chainGorGor3,199 chainGorGor3,457 chainGorGor3,467 chainGorGor3,471 chainGorGor3,538 chainGorGor3,555 chainGorGor3,558 chainGorGor3,625 chainGorGor3,630 chainGorGor3,636 chainGorGor3,640 chainGorGor3,651 chainGorGor3,683 chainGorGor3,802 chainGorGor3,816 chainGorGor3,822 chainGorGor3,828 chainGorGor3,832 chainGorGor3,835 chainGorGor3,863 chainGorGor3,1053 chainGorGor3,1077 chainGorGor3,1093 chainMm10,76 chainMm10,146 chainMm10,199 chainMm10,457 chainMm10,467 chainMm10,471 chainMm10,538 chainMm10,555 chainMm10,558 chainMm10,625 chainMm10,630 chainMm10,636 chainMm10,640 chainMm10,651 chainMm10,683 chainMm10,802 chainMm10,816 chainMm10,822 chainMm10,828 chainMm10,832 chainMm10,835 chainMm10,863 chainMm10,1053 chainMm10,1077 chainMm10,1093 chainNetCalJac3,81 chainNetCalJac3,151 chainNetCalJac3,204 chainNetCalJac3,463 chainNetCalJac3,473 chainNetCalJac3,477 chainNetCalJac3,544 chainNetCalJac3,561 chainNetCalJac3,564 chainNetCalJac3,631 chainNetCalJac3,636 chainNetCalJac3,642 chainNetCalJac3,646 chainNetCalJac3,657 chainNetCalJac3,689 chainNetCalJac3,808 chainNetCalJac3,822 chainNetCalJac3,828 chainNetCalJac3,834 chainNetCalJac3,838 chainNetCalJac3,841 chainNetCalJac3,869 chainNetCalJac3,1059 chainNetCalJac3,1083 chainNetCalJac3,1099 chainNetGorGor3,79 chainNetGorGor3,149 chainNetGorGor3,202 chainNetGorGor3,460 chainNetGorGor3,470 chainNetGorGor3,474 chainNetGorGor3,541 chainNetGorGor3,558 chainNetGorGor3,561 chainNetGorGor3,628 chainNetGorGor3,633 chainNetGorGor3,639 chainNetGorGor3,643 chainNetGorGor3,654 chainNetGorGor3,686 chainNetGorGor3,805 chainNetGorGor3,819 chainNetGorGor3,825 chainNetGorGor3,831 chainNetGorGor3,835 chainNetGorGor3,838 chainNetGorGor3,866 chainNetGorGor3,1056 chainNetGorGor3,1080 chainNetGorGor3,1096 chainNetMm10,79 chainNetMm10,149 chainNetMm10,202 chainNetMm10,460 chainNetMm10,470 chainNetMm10,474 chainNetMm10,541 chainNetMm10,558 chainNetMm10,561 chainNetMm10,628 chainNetMm10,633 chainNetMm10,639 chainNetMm10,643 chainNetMm10,654 chainNetMm10,686 chainNetMm10,805 chainNetMm10,819 chainNetMm10,825 chainNetMm10,831 chainNetMm10,835 chainNetMm10,838 chainNetMm10,866 chainNetMm10,1056 chainNetMm10,1080 chainNetMm10,1096 chainNetTarSyr2,79 chainNetTarSyr2,149 chainNetTarSyr2,202 chainNetTarSyr2,460 chainNetTarSyr2,470 chainNetTarSyr2,474 chainNetTarSyr2,541 chainNetTarSyr2,558 chainNetTarSyr2,561 chainNetTarSyr2,628 chainNetTarSyr2,633 chainNetTarSyr2,639 chainNetTarSyr2,643 chainNetTarSyr2,654 chainNetTarSyr2,686 chainNetTarSyr2,805 chainNetTarSyr2,819 chainNetTarSyr2,825 chainNetTarSyr2,831 chainNetTarSyr2,835 chainNetTarSyr2,838 chainNetTarSyr2,866 chainNetTarSyr2,1056 chainNetTarSyr2,1080 chainNetTarSyr2,1096 chainTarSyr2,76 chainTarSyr2,146 chainTarSyr2,199 chainTarSyr2,457 chainTarSyr2,467 chainTarSyr2,471 chainTarSyr2,538 chainTarSyr2,555 chainTarSyr2,558 chainTarSyr2,625 chainTarSyr2,630 chainTarSyr2,636 chainTarSyr2,640 chainTarSyr2,651 chainTarSyr2,683 chainTarSyr2,802 chainTarSyr2,816 chainTarSyr2,822 chainTarSyr2,828 chainTarSyr2,832 chainTarSyr2,835 chainTarSyr2,863 chainTarSyr2,1053 chainTarSyr2,1077 chainTarSyr2,1093 cpgIslandExt,43 cpgIslandExt,50 cpgIslandExt,54 cpgIslandExt,128 cpgIslandExt,166 cpgIslandExt,236 cpgIslandExt,590 cpgIslandExt,593 cpgIslandExtUnmasked,46 cpgIslandExtUnmasked,53 cpgIslandExtUnmasked,57 cpgIslandExtUnmasked,131 cpgIslandExtUnmasked,169 cpgIslandExtUnmasked,239 cpgIslandExtUnmasked,593 cpgIslandExtUnmasked,596 cpgIslandSuper,43 cpgIslandSuper,50 cpgIslandSuper,54 cpgIslandSuper,128 cpgIslandSuper,166 cpgIslandSuper,236 cpgIslandSuper,590 cpgIslandSuper,593 ensGene,31 ensemblGeneScaffold,77 gap,100 gap,104 gc5Base,44 genscan,102 genscan,132 gold,118 gold,124 microsat,53 microsat,119 mrna,64 mrna,81 mrna,116 mrna,142 mrna,215 mrna,334 mrna,401 mrna,420 nestedRepeats,177 nestedRepeats,226 nestedRepeats,344 nestedRepeats,363 netCalJac3,78 netCalJac3,148 netCalJac3,201 netCalJac3,460 netCalJac3,470 netCalJac3,474 netCalJac3,541 netCalJac3,558 netCalJac3,561 netCalJac3,628 netCalJac3,633 netCalJac3,639 netCalJac3,643 netCalJac3,654 netCalJac3,686 netCalJac3,805 netCalJac3,819 netCalJac3,825 netCalJac3,831 netCalJac3,835 netCalJac3,838 netCalJac3,866 netCalJac3,1056 netCalJac3,1080 netCalJac3,1096 netGorGor3,76 netGorGor3,146 netGorGor3,199 netGorGor3,457 netGorGor3,467 netGorGor3,471 netGorGor3,538 netGorGor3,555 netGorGor3,558 netGorGor3,625 netGorGor3,630 netGorGor3,636 netGorGor3,640 netGorGor3,651 netGorGor3,683 netGorGor3,802 netGorGor3,816 netGorGor3,822 netGorGor3,828 netGorGor3,832 netGorGor3,835 netGorGor3,863 netGorGor3,1053 netGorGor3,1077 netGorGor3,1093 netMm10,76 netMm10,146 netMm10,199 netMm10,457 netMm10,467 netMm10,471 netMm10,538 netMm10,555 netMm10,558 netMm10,625 netMm10,630 netMm10,636 netMm10,640 netMm10,651 netMm10,683 netMm10,802 netMm10,816 netMm10,822 netMm10,828 netMm10,832 netMm10,835 netMm10,863 netMm10,1053 netMm10,1077 netMm10,1093 netTarSyr2,76 netTarSyr2,146 netTarSyr2,199 netTarSyr2,457 netTarSyr2,467 netTarSyr2,471 netTarSyr2,538 netTarSyr2,555 netTarSyr2,558 netTarSyr2,625 netTarSyr2,630 netTarSyr2,636 netTarSyr2,640 netTarSyr2,651 netTarSyr2,683 netTarSyr2,802 netTarSyr2,816 netTarSyr2,822 netTarSyr2,828 netTarSyr2,832 netTarSyr2,835 netTarSyr2,863 netTarSyr2,1053 netTarSyr2,1077 netTarSyr2,1093 quality,45 quality,60 rmsk,36 rmsk,56 rmsk,226 rmsk,240 rmsk,367 rmsk,386 simpleRepeat,79 windowmaskerSdust,91 xenoRefGene,240 xenoRefGene,259 xenoRefGene,329 xenoRefGene,372 a100-170-29-137 chainNetTarSyr2,679 chainTarSyr2,676 netTarSyr2,676 a90-330-236-356 chainGorGor3,676 chainNetGorGor3,679 netGorGor3,676 a91-114-31-123 chainCalJac3,679 chainMm10,676 chainNetCalJac3,682 chainNetMm10,679 netCalJac3,679 netMm10,676 aa windowmaskerSdust,97 ab augustusGene,3 augustusGene,16 abbreviated chainCalJac3,591 chainGorGor3,588 chainMm10,588 chainNetCalJac3,594 chainNetGorGor3,591 chainNetMm10,591 chainNetTarSyr2,591 chainTarSyr2,588 netCalJac3,591 netGorGor3,588 netMm10,588 netTarSyr2,588 about chainCalJac3,466 chainCalJac3,479 chainCalJac3,855 chainGorGor3,463 chainGorGor3,476 chainGorGor3,852 chainMm10,463 chainMm10,476 chainMm10,852 chainNetCalJac3,469 chainNetCalJac3,482 chainNetCalJac3,858 chainNetGorGor3,466 chainNetGorGor3,479 chainNetGorGor3,855 chainNetMm10,466 chainNetMm10,479 chainNetMm10,855 chainNetTarSyr2,466 chainNetTarSyr2,479 chainNetTarSyr2,855 chainTarSyr2,463 chainTarSyr2,476 chainTarSyr2,852 gap,36 genscan,127 gold,38 microsat,98 mrna,351 netCalJac3,466 netCalJac3,479 netCalJac3,855 netGorGor3,463 netGorGor3,476 netGorGor3,852 netMm10,463 netMm10,476 netMm10,852 netTarSyr2,463 netTarSyr2,476 netTarSyr2,852 simpleRepeat,59 xenoRefGene,178 above chainCalJac3,538 chainCalJac3,550 chainCalJac3,570 chainGorGor3,535 chainGorGor3,547 chainGorGor3,567 chainMm10,535 chainMm10,547 chainMm10,567 chainNetCalJac3,541 chainNetCalJac3,553 chainNetCalJac3,573 chainNetGorGor3,538 chainNetGorGor3,550 chainNetGorGor3,570 chainNetMm10,538 chainNetMm10,550 chainNetMm10,570 chainNetTarSyr2,538 chainNetTarSyr2,550 chainNetTarSyr2,570 chainTarSyr2,535 chainTarSyr2,547 chainTarSyr2,567 nestedRepeats,218 netCalJac3,538 netCalJac3,550 netCalJac3,570 netGorGor3,535 netGorGor3,547 netGorGor3,567 netMm10,535 netMm10,547 netMm10,567 netTarSyr2,535 netTarSyr2,547 netTarSyr2,567 abundance chainCalJac3,183 chainGorGor3,181 chainMm10,181 chainNetCalJac3,186 chainNetGorGor3,184 chainNetMm10,184 chainNetTarSyr2,184 chainTarSyr2,181 netCalJac3,183 netGorGor3,181 netMm10,181 netTarSyr2,181 acad chainCalJac3,1076 chainGorGor3,1073 chainMm10,1073 chainNetCalJac3,1079 chainNetGorGor3,1076 chainNetMm10,1076 chainNetTarSyr2,1076 chainTarSyr2,1073 netCalJac3,1076 netGorGor3,1073 netMm10,1073 netTarSyr2,1073 acceptor genscan,32 access cpgIslandExt,505 cpgIslandExtUnmasked,508 cpgIslandSuper,505 ensGene,56 ensGene,100 accession xenoRefGene,118 xenoRefGene,130 according augustusGene,114 cpgIslandExt,370 cpgIslandExtUnmasked,373 cpgIslandSuper,370 nestedRepeats,183 acgt chainCalJac3,678 chainGorGor3,675 chainMm10,675 chainNetCalJac3,681 chainNetGorGor3,678 chainNetMm10,678 chainNetTarSyr2,678 chainTarSyr2,675 netCalJac3,678 netGorGor3,675 netMm10,675 netTarSyr2,675 acids ensGene,196 ensemblGeneScaffold,135 microsat,126 mrna,480 mrna,505 simpleRepeat,86 xenoRefGene,350 xenoRefGene,383 added chainCalJac3,601 chainGorGor3,598 chainMm10,598 chainNetCalJac3,604 chainNetGorGor3,601 chainNetMm10,601 chainNetTarSyr2,601 chainTarSyr2,598 nestedRepeats,147 netCalJac3,601 netGorGor3,598 netMm10,598 netTarSyr2,598 additional nestedRepeats,288 rmsk,295 admin cpgIslandExt,577 cpgIslandExtUnmasked,580 cpgIslandSuper,577 advice chainCalJac3,941 chainCalJac3,973 chainGorGor3,938 chainGorGor3,970 chainMm10,938 chainMm10,970 chainNetCalJac3,944 chainNetCalJac3,976 chainNetGorGor3,941 chainNetGorGor3,973 chainNetMm10,941 chainNetMm10,973 chainNetTarSyr2,941 chainNetTarSyr2,973 chainTarSyr2,938 chainTarSyr2,970 netCalJac3,941 netCalJac3,973 netGorGor3,938 netGorGor3,970 netMm10,938 netMm10,970 netTarSyr2,938 netTarSyr2,970 af nestedRepeats,372 nestedRepeats,396 rmsk,395 rmsk,419 afa nestedRepeats,325 rmsk,348 affine chainCalJac3,88 chainGorGor3,86 chainMm10,86 chainNetCalJac3,91 chainNetGorGor3,89 chainNetMm10,89 chainNetTarSyr2,89 chainTarSyr2,86 netCalJac3,88 netGorGor3,86 netMm10,86 netTarSyr2,86 after chainCalJac3,913 chainGorGor3,910 chainMm10,910 chainNetCalJac3,916 chainNetGorGor3,913 chainNetMm10,913 chainNetTarSyr2,913 chainTarSyr2,910 cpgIslandExt,94 cpgIslandExt,326 cpgIslandExtUnmasked,97 cpgIslandExtUnmasked,329 cpgIslandSuper,94 cpgIslandSuper,326 netCalJac3,913 netGorGor3,910 netMm10,910 netTarSyr2,910 against mrna,344 mrna,393 xenoRefGene,222 agarwala windowmaskerSdust,98 agp gap,50 gap,59 gap,66 gold,49 gold,58 gold,65 aids cpgIslandExt,86 cpgIslandExtUnmasked,89 cpgIslandSuper,86 al cpgIslandExt,378 cpgIslandExtUnmasked,381 cpgIslandSuper,378 ensGene,46 ensGene,189 ensemblGeneScaffold,91 ensemblGeneScaffold,128 xenoRefGene,341 algorithm augustusGene,130 align chainCalJac3,199 chainGorGor3,197 chainMm10,197 chainNetCalJac3,202 chainNetGorGor3,200 chainNetMm10,200 chainNetTarSyr2,200 chainTarSyr2,197 netCalJac3,199 netGorGor3,197 netMm10,197 netTarSyr2,197 alignable chainCalJac3,23 chainCalJac3,39 chainGorGor3,22 chainGorGor3,38 chainMm10,22 chainMm10,38 chainNetCalJac3,26 chainNetCalJac3,42 chainNetGorGor3,25 chainNetGorGor3,41 chainNetMm10,25 chainNetMm10,41 chainNetTarSyr2,25 chainNetTarSyr2,41 chainTarSyr2,22 chainTarSyr2,38 netCalJac3,23 netCalJac3,39 netGorGor3,22 netGorGor3,38 netMm10,22 netMm10,38 netTarSyr2,22 netTarSyr2,38 aligned chainCalJac3,594 chainGorGor3,591 chainMm10,591 chainNetCalJac3,597 chainNetGorGor3,594 chainNetMm10,594 chainNetTarSyr2,594 chainTarSyr2,591 mrna,392 mrna,404 netCalJac3,594 netGorGor3,591 netMm10,591 netTarSyr2,591 xenoRefGene,221 xenoRefGene,243 aligning chainCalJac3,137 chainCalJac3,338 chainCalJac3,368 chainGorGor3,135 chainGorGor3,335 chainGorGor3,365 chainMm10,135 chainMm10,335 chainMm10,365 chainNetCalJac3,140 chainNetCalJac3,341 chainNetCalJac3,371 chainNetGorGor3,138 chainNetGorGor3,338 chainNetGorGor3,368 chainNetMm10,138 chainNetMm10,338 chainNetMm10,368 chainNetTarSyr2,138 chainNetTarSyr2,338 chainNetTarSyr2,368 chainTarSyr2,135 chainTarSyr2,335 chainTarSyr2,365 netCalJac3,137 netCalJac3,338 netCalJac3,368 netGorGor3,135 netGorGor3,335 netGorGor3,365 netMm10,135 netMm10,335 netMm10,365 netTarSyr2,135 netTarSyr2,335 netTarSyr2,365 alignment chainCalJac3,263 chainCalJac3,1023 chainGorGor3,261 chainGorGor3,1020 chainMm10,261 chainMm10,1020 chainNetCalJac3,266 chainNetCalJac3,1026 chainNetGorGor3,264 chainNetGorGor3,1023 chainNetMm10,264 chainNetMm10,1023 chainNetTarSyr2,264 chainNetTarSyr2,1023 chainTarSyr2,261 chainTarSyr2,1020 mrna,39 mrna,362 mrna,368 mrna,380 mrna,409 mrna,523 netCalJac3,9 netCalJac3,263 netCalJac3,1023 netGorGor3,8 netGorGor3,261 netGorGor3,1020 netMm10,8 netMm10,261 netMm10,1020 netTarSyr2,8 netTarSyr2,261 netTarSyr2,1020 xenoRefGene,232 xenoRefGene,248 xenoRefGene,307 alignments augustusGene,300 chainCalJac3,10 chainCalJac3,64 chainCalJac3,453 chainCalJac3,606 chainCalJac3,618 chainCalJac3,626 chainCalJac3,653 chainCalJac3,771 chainCalJac3,1043 chainCalJac3,1108 chainGorGor3,9 chainGorGor3,63 chainGorGor3,450 chainGorGor3,603 chainGorGor3,615 chainGorGor3,623 chainGorGor3,650 chainGorGor3,768 chainGorGor3,1040 chainGorGor3,1105 chainMm10,9 chainMm10,63 chainMm10,450 chainMm10,603 chainMm10,615 chainMm10,623 chainMm10,650 chainMm10,768 chainMm10,1040 chainMm10,1105 chainNetCalJac3,13 chainNetCalJac3,67 chainNetCalJac3,456 chainNetCalJac3,609 chainNetCalJac3,621 chainNetCalJac3,629 chainNetCalJac3,656 chainNetCalJac3,774 chainNetCalJac3,1046 chainNetCalJac3,1111 chainNetCalJac3Viewchain,11 chainNetCalJac3Viewnet,11 chainNetGorGor3,12 chainNetGorGor3,66 chainNetGorGor3,453 chainNetGorGor3,606 chainNetGorGor3,618 chainNetGorGor3,626 chainNetGorGor3,653 chainNetGorGor3,771 chainNetGorGor3,1043 chainNetGorGor3,1108 chainNetGorGor3Viewchain,10 chainNetGorGor3Viewnet,10 chainNetMm10,12 chainNetMm10,66 chainNetMm10,453 chainNetMm10,606 chainNetMm10,618 chainNetMm10,626 chainNetMm10,653 chainNetMm10,771 chainNetMm10,1043 chainNetMm10,1108 chainNetMm10Viewchain,10 chainNetMm10Viewnet,10 chainNetTarSyr2,12 chainNetTarSyr2,66 chainNetTarSyr2,453 chainNetTarSyr2,606 chainNetTarSyr2,618 chainNetTarSyr2,626 chainNetTarSyr2,653 chainNetTarSyr2,771 chainNetTarSyr2,1043 chainNetTarSyr2,1108 chainNetTarSyr2Viewchain,10 chainNetTarSyr2Viewnet,10 chainTarSyr2,9 chainTarSyr2,63 chainTarSyr2,450 chainTarSyr2,603 chainTarSyr2,615 chainTarSyr2,623 chainTarSyr2,650 chainTarSyr2,768 chainTarSyr2,1040 chainTarSyr2,1105 mrna,17 mrna,418 netCalJac3,64 netCalJac3,453 netCalJac3,606 netCalJac3,618 netCalJac3,626 netCalJac3,653 netCalJac3,771 netCalJac3,1043 netCalJac3,1108 netGorGor3,63 netGorGor3,450 netGorGor3,603 netGorGor3,615 netGorGor3,623 netGorGor3,650 netGorGor3,768 netGorGor3,1040 netGorGor3,1105 netMm10,63 netMm10,450 netMm10,603 netMm10,615 netMm10,623 netMm10,650 netMm10,768 netMm10,1040 netMm10,1105 netTarSyr2,63 netTarSyr2,450 netTarSyr2,603 netTarSyr2,615 netTarSyr2,623 netTarSyr2,650 netTarSyr2,768 netTarSyr2,1040 netTarSyr2,1105 rmsk,306 xenoRefGene,257 all augustusGene,207 chainCalJac3,625 chainGorGor3,622 chainMm10,622 chainNetCalJac3,628 chainNetGorGor3,625 chainNetMm10,625 chainNetTarSyr2,625 chainTarSyr2,622 cpgIslandExt,327 cpgIslandExt,527 cpgIslandExtUnmasked,6 cpgIslandExtUnmasked,330 cpgIslandExtUnmasked,530 cpgIslandSuper,327 cpgIslandSuper,527 mrna,138 mrna,192 mrna,247 nestedRepeats,138 nestedRepeats,170 netCalJac3,625 netGorGor3,622 netMm10,622 netTarSyr2,622 rmsk,65 allows augustusGene,168 chainCalJac3,83 chainGorGor3,81 chainMm10,81 chainNetCalJac3,86 chainNetGorGor3,84 chainNetMm10,84 chainNetTarSyr2,84 chainTarSyr2,81 mrna,337 netCalJac3,83 netGorGor3,81 netMm10,81 netTarSyr2,81 xenoRefGene,149 alone augustusGene,33 already chainCalJac3,816 chainGorGor3,813 chainMm10,813 chainNetCalJac3,819 chainNetGorGor3,816 chainNetMm10,816 chainNetTarSyr2,816 chainTarSyr2,813 netCalJac3,816 netGorGor3,813 netMm10,813 netTarSyr2,813 also chainCalJac3,94 chainGorGor3,92 chainMm10,92 chainNetCalJac3,97 chainNetGorGor3,95 chainNetMm10,95 chainNetTarSyr2,95 chainTarSyr2,92 cpgIslandExt,531 cpgIslandExtUnmasked,534 cpgIslandSuper,531 ensGene,48 gap,32 gold,34 mrna,219 mrna,327 mrna,371 netCalJac3,94 netGorGor3,92 netMm10,92 netTarSyr2,92 alter mrna,75 alternating gold,90 alternative augustusGene,122 alternatives-from-sampling augustusGene,131 alus rmsk,160 always gold,121 amount rmsk,215 amsterdam genscan,201 an chainCalJac3,155 chainCalJac3,182 chainCalJac3,188 chainGorGor3,153 chainGorGor3,180 chainGorGor3,186 chainMm10,153 chainMm10,180 chainMm10,186 chainNetCalJac3,158 chainNetCalJac3,185 chainNetCalJac3,191 chainNetGorGor3,156 chainNetGorGor3,183 chainNetGorGor3,189 chainNetMm10,156 chainNetMm10,183 chainNetMm10,189 chainNetTarSyr2,156 chainNetTarSyr2,183 chainNetTarSyr2,189 chainTarSyr2,153 chainTarSyr2,180 chainTarSyr2,186 cpgIslandExt,66 cpgIslandExtUnmasked,69 cpgIslandSuper,66 gc5Base,65 nestedRepeats,196 nestedRepeats,347 netCalJac3,155 netCalJac3,182 netCalJac3,188 netGorGor3,153 netGorGor3,180 netGorGor3,186 netMm10,153 netMm10,180 netMm10,186 netTarSyr2,153 netTarSyr2,180 netTarSyr2,186 quality,79 rmsk,370 xenoRefGene,143 xenoRefGene,231 xenoRefGene,343 analyze microsat,122 simpleRepeat,82 and augustusGene,9 augustusGene,60 augustusGene,74 augustusGene,87 augustusGene,206 augustusGene,271 augustusGene,277 augustusGene,296 augustusGene,327 chainCalJac3,100 chainCalJac3,115 chainCalJac3,231 chainCalJac3,239 chainCalJac3,253 chainCalJac3,293 chainCalJac3,316 chainCalJac3,442 chainCalJac3,597 chainCalJac3,632 chainCalJac3,641 chainCalJac3,782 chainCalJac3,860 chainCalJac3,892 chainCalJac3,903 chainCalJac3,912 chainCalJac3,937 chainCalJac3,952 chainCalJac3,977 chainCalJac3,983 chainCalJac3,989 chainCalJac3,996 chainCalJac3,1002 chainCalJac3,1066 chainCalJac3,1071 chainGorGor3,98 chainGorGor3,113 chainGorGor3,229 chainGorGor3,237 chainGorGor3,251 chainGorGor3,291 chainGorGor3,313 chainGorGor3,439 chainGorGor3,594 chainGorGor3,629 chainGorGor3,638 chainGorGor3,779 chainGorGor3,857 chainGorGor3,889 chainGorGor3,900 chainGorGor3,909 chainGorGor3,934 chainGorGor3,949 chainGorGor3,974 chainGorGor3,980 chainGorGor3,986 chainGorGor3,993 chainGorGor3,999 chainGorGor3,1063 chainGorGor3,1068 chainMm10,98 chainMm10,113 chainMm10,229 chainMm10,237 chainMm10,251 chainMm10,291 chainMm10,313 chainMm10,439 chainMm10,594 chainMm10,629 chainMm10,638 chainMm10,779 chainMm10,857 chainMm10,889 chainMm10,900 chainMm10,909 chainMm10,934 chainMm10,949 chainMm10,974 chainMm10,980 chainMm10,986 chainMm10,993 chainMm10,999 chainMm10,1063 chainMm10,1068 chainNetCalJac3,11 chainNetCalJac3,103 chainNetCalJac3,118 chainNetCalJac3,234 chainNetCalJac3,242 chainNetCalJac3,256 chainNetCalJac3,296 chainNetCalJac3,319 chainNetCalJac3,445 chainNetCalJac3,600 chainNetCalJac3,635 chainNetCalJac3,644 chainNetCalJac3,785 chainNetCalJac3,863 chainNetCalJac3,895 chainNetCalJac3,906 chainNetCalJac3,915 chainNetCalJac3,940 chainNetCalJac3,955 chainNetCalJac3,980 chainNetCalJac3,986 chainNetCalJac3,992 chainNetCalJac3,999 chainNetCalJac3,1005 chainNetCalJac3,1069 chainNetCalJac3,1074 chainNetCalJac3Viewchain,9 chainNetCalJac3Viewnet,9 chainNetGorGor3,10 chainNetGorGor3,101 chainNetGorGor3,116 chainNetGorGor3,232 chainNetGorGor3,240 chainNetGorGor3,254 chainNetGorGor3,294 chainNetGorGor3,316 chainNetGorGor3,442 chainNetGorGor3,597 chainNetGorGor3,632 chainNetGorGor3,641 chainNetGorGor3,782 chainNetGorGor3,860 chainNetGorGor3,892 chainNetGorGor3,903 chainNetGorGor3,912 chainNetGorGor3,937 chainNetGorGor3,952 chainNetGorGor3,977 chainNetGorGor3,983 chainNetGorGor3,989 chainNetGorGor3,996 chainNetGorGor3,1002 chainNetGorGor3,1066 chainNetGorGor3,1071 chainNetGorGor3Viewchain,8 chainNetGorGor3Viewnet,8 chainNetMm10,10 chainNetMm10,101 chainNetMm10,116 chainNetMm10,232 chainNetMm10,240 chainNetMm10,254 chainNetMm10,294 chainNetMm10,316 chainNetMm10,442 chainNetMm10,597 chainNetMm10,632 chainNetMm10,641 chainNetMm10,782 chainNetMm10,860 chainNetMm10,892 chainNetMm10,903 chainNetMm10,912 chainNetMm10,937 chainNetMm10,952 chainNetMm10,977 chainNetMm10,983 chainNetMm10,989 chainNetMm10,996 chainNetMm10,1002 chainNetMm10,1066 chainNetMm10,1071 chainNetMm10Viewchain,8 chainNetMm10Viewnet,8 chainNetTarSyr2,10 chainNetTarSyr2,101 chainNetTarSyr2,116 chainNetTarSyr2,232 chainNetTarSyr2,240 chainNetTarSyr2,254 chainNetTarSyr2,294 chainNetTarSyr2,316 chainNetTarSyr2,442 chainNetTarSyr2,597 chainNetTarSyr2,632 chainNetTarSyr2,641 chainNetTarSyr2,782 chainNetTarSyr2,860 chainNetTarSyr2,892 chainNetTarSyr2,903 chainNetTarSyr2,912 chainNetTarSyr2,937 chainNetTarSyr2,952 chainNetTarSyr2,977 chainNetTarSyr2,983 chainNetTarSyr2,989 chainNetTarSyr2,996 chainNetTarSyr2,1002 chainNetTarSyr2,1066 chainNetTarSyr2,1071 chainNetTarSyr2Viewchain,8 chainNetTarSyr2Viewnet,8 chainTarSyr2,98 chainTarSyr2,113 chainTarSyr2,229 chainTarSyr2,237 chainTarSyr2,251 chainTarSyr2,291 chainTarSyr2,313 chainTarSyr2,439 chainTarSyr2,594 chainTarSyr2,629 chainTarSyr2,638 chainTarSyr2,779 chainTarSyr2,857 chainTarSyr2,889 chainTarSyr2,900 chainTarSyr2,909 chainTarSyr2,934 chainTarSyr2,949 chainTarSyr2,974 chainTarSyr2,980 chainTarSyr2,986 chainTarSyr2,993 chainTarSyr2,999 chainTarSyr2,1063 chainTarSyr2,1068 cpgIslandExt,12 cpgIslandExt,35 cpgIslandExt,183 cpgIslandExt,244 cpgIslandExt,248 cpgIslandExt,295 cpgIslandExt,508 cpgIslandExt,599 cpgIslandExtUnmasked,15 cpgIslandExtUnmasked,38 cpgIslandExtUnmasked,186 cpgIslandExtUnmasked,247 cpgIslandExtUnmasked,251 cpgIslandExtUnmasked,298 cpgIslandExtUnmasked,511 cpgIslandExtUnmasked,602 cpgIslandSuper,12 cpgIslandSuper,35 cpgIslandSuper,183 cpgIslandSuper,244 cpgIslandSuper,248 cpgIslandSuper,295 cpgIslandSuper,508 cpgIslandSuper,599 cytoBandIdeo,8 ensGene,6 ensGene,128 ensemblGeneScaffold,8 ensemblGeneScaffold,33 ensemblGeneScaffold,74 gap,5 gap,81 gap,103 gc5Base,9 gc5Base,22 gc5Base,74 genscan,7 genscan,30 genscan,40 genscan,46 genscan,63 genscan,83 genscan,97 genscan,108 genscan,119 genscan,138 genscan,147 gold,6 gold,92 gold,106 gold,112 microsat,4 microsat,8 microsat,33 microsat,36 microsat,67 microsat,72 microsat,75 mrna,10 mrna,24 mrna,29 mrna,78 mrna,239 mrna,358 mrna,429 nestedRepeats,12 nestedRepeats,38 nestedRepeats,113 nestedRepeats,162 nestedRepeats,166 nestedRepeats,231 nestedRepeats,256 nestedRepeats,309 nestedRepeats,315 nestedRepeats,346 nestedRepeats,375 netCalJac3,100 netCalJac3,115 netCalJac3,231 netCalJac3,239 netCalJac3,253 netCalJac3,293 netCalJac3,316 netCalJac3,442 netCalJac3,597 netCalJac3,632 netCalJac3,641 netCalJac3,782 netCalJac3,860 netCalJac3,892 netCalJac3,903 netCalJac3,912 netCalJac3,937 netCalJac3,952 netCalJac3,977 netCalJac3,983 netCalJac3,989 netCalJac3,996 netCalJac3,1002 netCalJac3,1066 netCalJac3,1071 netGorGor3,98 netGorGor3,113 netGorGor3,229 netGorGor3,237 netGorGor3,251 netGorGor3,291 netGorGor3,313 netGorGor3,439 netGorGor3,594 netGorGor3,629 netGorGor3,638 netGorGor3,779 netGorGor3,857 netGorGor3,889 netGorGor3,900 netGorGor3,909 netGorGor3,934 netGorGor3,949 netGorGor3,974 netGorGor3,980 netGorGor3,986 netGorGor3,993 netGorGor3,999 netGorGor3,1063 netGorGor3,1068 netMm10,98 netMm10,113 netMm10,229 netMm10,237 netMm10,251 netMm10,291 netMm10,313 netMm10,439 netMm10,594 netMm10,629 netMm10,638 netMm10,779 netMm10,857 netMm10,889 netMm10,900 netMm10,909 netMm10,934 netMm10,949 netMm10,974 netMm10,980 netMm10,986 netMm10,993 netMm10,999 netMm10,1063 netMm10,1068 netTarSyr2,98 netTarSyr2,113 netTarSyr2,229 netTarSyr2,237 netTarSyr2,251 netTarSyr2,291 netTarSyr2,313 netTarSyr2,439 netTarSyr2,594 netTarSyr2,629 netTarSyr2,638 netTarSyr2,779 netTarSyr2,857 netTarSyr2,889 netTarSyr2,900 netTarSyr2,909 netTarSyr2,934 netTarSyr2,949 netTarSyr2,974 netTarSyr2,980 netTarSyr2,986 netTarSyr2,993 netTarSyr2,999 netTarSyr2,1063 netTarSyr2,1068 quality,9 quality,101 rmsk,7 rmsk,28 rmsk,137 rmsk,221 rmsk,332 rmsk,338 rmsk,369 rmsk,398 simpleRepeat,9 simpleRepeat,42 windowmaskerSdust,10 xenoRefGene,8 xenoRefGene,17 xenoRefGene,45 xenoRefGene,79 xenoRefGene,129 xenoRefGene,154 xenoRefGene,187 xenoRefGene,200 xenoRefGene,268 xenoRefGene,295 xenoRefGene,380 annotated rmsk,67 annotation chainCalJac3,304 chainGorGor3,302 chainMm10,302 chainNetCalJac3,307 chainNetGorGor3,305 chainNetMm10,305 chainNetTarSyr2,305 chainTarSyr2,302 ensGene,165 ensemblGeneScaffold,105 netCalJac3,304 netGorGor3,302 netMm10,302 netTarSyr2,302 rmsk,38 annotations ensGene,156 genscan,120 nestedRepeats,71 xenoRefGene,188 any mrna,262 api cpgIslandExt,519 cpgIslandExtUnmasked,522 cpgIslandSuper,519 ensGene,109 apply mrna,134 appropriate xenoRefGene,112 apr genscan,224 mrna,528 xenoRefGene,312 apsects gc5Base,51 archive ensGene,142 are augustusGene,27 chainCalJac3,22 chainCalJac3,41 chainCalJac3,54 chainCalJac3,144 chainCalJac3,214 chainCalJac3,225 chainCalJac3,327 chainCalJac3,396 chainCalJac3,417 chainCalJac3,424 chainCalJac3,507 chainCalJac3,698 chainGorGor3,21 chainGorGor3,40 chainGorGor3,53 chainGorGor3,142 chainGorGor3,212 chainGorGor3,223 chainGorGor3,324 chainGorGor3,393 chainGorGor3,414 chainGorGor3,421 chainGorGor3,504 chainGorGor3,695 chainMm10,21 chainMm10,40 chainMm10,53 chainMm10,142 chainMm10,212 chainMm10,223 chainMm10,324 chainMm10,393 chainMm10,414 chainMm10,421 chainMm10,504 chainMm10,695 chainNetCalJac3,25 chainNetCalJac3,44 chainNetCalJac3,57 chainNetCalJac3,147 chainNetCalJac3,217 chainNetCalJac3,228 chainNetCalJac3,330 chainNetCalJac3,399 chainNetCalJac3,420 chainNetCalJac3,427 chainNetCalJac3,510 chainNetCalJac3,701 chainNetGorGor3,24 chainNetGorGor3,43 chainNetGorGor3,56 chainNetGorGor3,145 chainNetGorGor3,215 chainNetGorGor3,226 chainNetGorGor3,327 chainNetGorGor3,396 chainNetGorGor3,417 chainNetGorGor3,424 chainNetGorGor3,507 chainNetGorGor3,698 chainNetMm10,24 chainNetMm10,43 chainNetMm10,56 chainNetMm10,145 chainNetMm10,215 chainNetMm10,226 chainNetMm10,327 chainNetMm10,396 chainNetMm10,417 chainNetMm10,424 chainNetMm10,507 chainNetMm10,698 chainNetTarSyr2,24 chainNetTarSyr2,43 chainNetTarSyr2,56 chainNetTarSyr2,145 chainNetTarSyr2,215 chainNetTarSyr2,226 chainNetTarSyr2,327 chainNetTarSyr2,396 chainNetTarSyr2,417 chainNetTarSyr2,424 chainNetTarSyr2,507 chainNetTarSyr2,698 chainTarSyr2,21 chainTarSyr2,40 chainTarSyr2,53 chainTarSyr2,142 chainTarSyr2,212 chainTarSyr2,223 chainTarSyr2,324 chainTarSyr2,393 chainTarSyr2,414 chainTarSyr2,421 chainTarSyr2,504 chainTarSyr2,695 cpgIslandExt,8 cpgIslandExt,17 cpgIslandExt,28 cpgIslandExt,116 cpgIslandExt,149 cpgIslandExt,153 cpgIslandExtUnmasked,11 cpgIslandExtUnmasked,20 cpgIslandExtUnmasked,31 cpgIslandExtUnmasked,119 cpgIslandExtUnmasked,152 cpgIslandExtUnmasked,156 cpgIslandSuper,8 cpgIslandSuper,17 cpgIslandSuper,28 cpgIslandSuper,116 cpgIslandSuper,149 cpgIslandSuper,153 ensGene,81 ensGene,121 ensemblGeneScaffold,29 gap,24 gap,69 genscan,25 genscan,160 gold,26 gold,84 gold,101 microsat,16 microsat,25 microsat,52 mrna,48 mrna,95 mrna,105 nestedRepeats,74 nestedRepeats,102 nestedRepeats,140 nestedRepeats,146 nestedRepeats,164 nestedRepeats,172 nestedRepeats,181 nestedRepeats,209 nestedRepeats,274 nestedRepeats,281 netCalJac3,22 netCalJac3,41 netCalJac3,54 netCalJac3,144 netCalJac3,214 netCalJac3,225 netCalJac3,327 netCalJac3,396 netCalJac3,417 netCalJac3,424 netCalJac3,507 netCalJac3,698 netGorGor3,21 netGorGor3,40 netGorGor3,53 netGorGor3,142 netGorGor3,212 netGorGor3,223 netGorGor3,324 netGorGor3,393 netGorGor3,414 netGorGor3,421 netGorGor3,504 netGorGor3,695 netMm10,21 netMm10,40 netMm10,53 netMm10,142 netMm10,212 netMm10,223 netMm10,324 netMm10,393 netMm10,414 netMm10,421 netMm10,504 netMm10,695 netTarSyr2,21 netTarSyr2,40 netTarSyr2,53 netTarSyr2,142 netTarSyr2,212 netTarSyr2,223 netTarSyr2,324 netTarSyr2,393 netTarSyr2,414 netTarSyr2,421 netTarSyr2,504 netTarSyr2,695 rmsk,43 rmsk,288 rmsk,304 rmsk,312 simpleRepeat,49 xenoRefGene,40 xenoRefGene,105 xenoRefGene,203 areas cpgIslandExt,305 cpgIslandExtUnmasked,308 cpgIslandSuper,305 gc5Base,37 arian chainCalJac3,950 chainGorGor3,947 chainMm10,947 chainNetCalJac3,953 chainNetGorGor3,950 chainNetMm10,950 chainNetTarSyr2,950 chainTarSyr2,947 nestedRepeats,305 netCalJac3,950 netGorGor3,947 netMm10,947 netTarSyr2,947 rmsk,16 rmsk,328 arrangement cpgIslandExt,67 cpgIslandExtUnmasked,70 cpgIslandSuper,67 arrows nestedRepeats,145 nestedRepeats,163 as augustusGene,77 augustusGene,79 chainCalJac3,469 chainCalJac3,509 chainCalJac3,532 chainCalJac3,547 chainCalJac3,809 chainCalJac3,864 chainCalJac3,922 chainGorGor3,466 chainGorGor3,506 chainGorGor3,529 chainGorGor3,544 chainGorGor3,806 chainGorGor3,861 chainGorGor3,919 chainMm10,466 chainMm10,506 chainMm10,529 chainMm10,544 chainMm10,806 chainMm10,861 chainMm10,919 chainNetCalJac3,472 chainNetCalJac3,512 chainNetCalJac3,535 chainNetCalJac3,550 chainNetCalJac3,812 chainNetCalJac3,867 chainNetCalJac3,925 chainNetGorGor3,469 chainNetGorGor3,509 chainNetGorGor3,532 chainNetGorGor3,547 chainNetGorGor3,809 chainNetGorGor3,864 chainNetGorGor3,922 chainNetMm10,469 chainNetMm10,509 chainNetMm10,532 chainNetMm10,547 chainNetMm10,809 chainNetMm10,864 chainNetMm10,922 chainNetTarSyr2,469 chainNetTarSyr2,509 chainNetTarSyr2,532 chainNetTarSyr2,547 chainNetTarSyr2,809 chainNetTarSyr2,864 chainNetTarSyr2,922 chainTarSyr2,466 chainTarSyr2,506 chainTarSyr2,529 chainTarSyr2,544 chainTarSyr2,806 chainTarSyr2,861 chainTarSyr2,919 cpgIslandExt,165 cpgIslandExt,548 cpgIslandExt,550 cpgIslandExtUnmasked,168 cpgIslandExtUnmasked,551 cpgIslandExtUnmasked,553 cpgIslandSuper,165 cpgIslandSuper,548 cpgIslandSuper,550 ensGene,87 gap,71 genscan,35 genscan,37 microsat,21 nestedRepeats,125 netCalJac3,469 netCalJac3,509 netCalJac3,532 netCalJac3,547 netCalJac3,809 netCalJac3,864 netCalJac3,922 netGorGor3,466 netGorGor3,506 netGorGor3,529 netGorGor3,544 netGorGor3,806 netGorGor3,861 netGorGor3,919 netMm10,466 netMm10,506 netMm10,529 netMm10,544 netMm10,806 netMm10,861 netMm10,919 netTarSyr2,466 netTarSyr2,506 netTarSyr2,529 netTarSyr2,544 netTarSyr2,806 netTarSyr2,861 netTarSyr2,919 quality,91 rmsk,53 rmsk,55 windowmaskerSdust,18 aspects quality,67 assemblies augustusGene,196 augustusGene,237 chainCalJac3,326 chainCalJac3,589 chainGorGor3,323 chainGorGor3,586 chainMm10,323 chainMm10,586 chainNetCalJac3,329 chainNetCalJac3,592 chainNetGorGor3,326 chainNetGorGor3,589 chainNetMm10,326 chainNetMm10,589 chainNetTarSyr2,326 chainNetTarSyr2,589 chainTarSyr2,323 chainTarSyr2,586 netCalJac3,326 netCalJac3,589 netGorGor3,323 netGorGor3,586 netMm10,323 netMm10,586 netTarSyr2,323 netTarSyr2,586 rmsk,107 assembly augustusGene,197 chainCalJac3,153 chainCalJac3,161 chainCalJac3,313 chainGorGor3,151 chainGorGor3,159 chainGorGor3,310 chainMm10,151 chainMm10,159 chainMm10,310 chainNetCalJac3,156 chainNetCalJac3,164 chainNetCalJac3,316 chainNetGorGor3,154 chainNetGorGor3,162 chainNetGorGor3,313 chainNetMm10,154 chainNetMm10,162 chainNetMm10,313 chainNetTarSyr2,154 chainNetTarSyr2,162 chainNetTarSyr2,313 chainTarSyr2,151 chainTarSyr2,159 chainTarSyr2,310 ensemblGeneScaffold,2 ensemblGeneScaffold,6 ensemblGeneScaffold,24 gap,20 gap,22 gap,29 gap,38 gap,46 gap,117 gold,1 gold,2 gold,22 gold,24 gold,31 gold,40 gold,45 netCalJac3,153 netCalJac3,161 netCalJac3,313 netGorGor3,151 netGorGor3,159 netGorGor3,310 netMm10,151 netMm10,159 netMm10,310 netTarSyr2,151 netTarSyr2,159 netTarSyr2,310 quality,26 quality,97 assembly.2bit cpgIslandExt,412 cpgIslandExtUnmasked,415 cpgIslandSuper,412 assembly.txt ensemblGeneScaffold,73 associated cpgIslandExt,18 cpgIslandExt,38 cpgIslandExt,510 cpgIslandExtUnmasked,21 cpgIslandExtUnmasked,41 cpgIslandExtUnmasked,513 cpgIslandSuper,18 cpgIslandSuper,38 cpgIslandSuper,510 gc5Base,34 rmsk,224 simpleRepeat,51 astashyn xenoRefGene,328 at chainCalJac3,426 chainCalJac3,804 chainCalJac3,926 chainCalJac3,961 chainCalJac3,966 chainCalJac3,1007 chainGorGor3,423 chainGorGor3,801 chainGorGor3,923 chainGorGor3,958 chainGorGor3,963 chainGorGor3,1004 chainMm10,423 chainMm10,801 chainMm10,923 chainMm10,958 chainMm10,963 chainMm10,1004 chainNetCalJac3,429 chainNetCalJac3,807 chainNetCalJac3,929 chainNetCalJac3,964 chainNetCalJac3,969 chainNetCalJac3,1010 chainNetGorGor3,426 chainNetGorGor3,804 chainNetGorGor3,926 chainNetGorGor3,961 chainNetGorGor3,966 chainNetGorGor3,1007 chainNetMm10,426 chainNetMm10,804 chainNetMm10,926 chainNetMm10,961 chainNetMm10,966 chainNetMm10,1007 chainNetTarSyr2,426 chainNetTarSyr2,804 chainNetTarSyr2,926 chainNetTarSyr2,961 chainNetTarSyr2,966 chainNetTarSyr2,1007 chainTarSyr2,423 chainTarSyr2,801 chainTarSyr2,923 chainTarSyr2,958 chainTarSyr2,963 chainTarSyr2,1004 cpgIslandExt,155 cpgIslandExt,218 cpgIslandExt,235 cpgIslandExtUnmasked,158 cpgIslandExtUnmasked,221 cpgIslandExtUnmasked,238 cpgIslandSuper,155 cpgIslandSuper,218 cpgIslandSuper,235 microsat,28 microsat,77 mrna,211 mrna,430 mrna,447 netCalJac3,426 netCalJac3,804 netCalJac3,926 netCalJac3,961 netCalJac3,966 netCalJac3,1007 netGorGor3,423 netGorGor3,801 netGorGor3,923 netGorGor3,958 netGorGor3,963 netGorGor3,1004 netMm10,423 netMm10,801 netMm10,923 netMm10,958 netMm10,963 netMm10,1004 netTarSyr2,423 netTarSyr2,801 netTarSyr2,923 netTarSyr2,958 netTarSyr2,963 netTarSyr2,1004 quality,29 rmsk,243 rmsk,267 xenoRefGene,93 xenoRefGene,269 xenoRefGene,285 augustus augustusGene,1 augustusGene,2 augustusGene,22 augustusGene,148 augustusGene,256 auml windowmaskerSdust,95 available augustusGene,239 cpgIslandExt,543 cpgIslandExtUnmasked,546 cpgIslandSuper,543 ensGene,82 ensGene,122 nestedRepeats,259 nestedRepeats,276 rmsk,73 windowmaskerSdust,40 average nestedRepeats,186 nestedRepeats,221 averaged quality,52 awk cpgIslandExt,424 cpgIslandExtUnmasked,427 cpgIslandSuper,424 axt chainCalJac3,610 chainCalJac3,617 chainGorGor3,607 chainGorGor3,614 chainMm10,607 chainMm10,614 chainNetCalJac3,613 chainNetCalJac3,620 chainNetGorGor3,610 chainNetGorGor3,617 chainNetMm10,610 chainNetMm10,617 chainNetTarSyr2,610 chainNetTarSyr2,617 chainTarSyr2,607 chainTarSyr2,614 netCalJac3,610 netCalJac3,617 netGorGor3,607 netGorGor3,614 netMm10,607 netMm10,614 netTarSyr2,607 netTarSyr2,614 axtchain chainCalJac3,622 chainCalJac3,709 chainCalJac3,957 chainGorGor3,619 chainGorGor3,706 chainGorGor3,954 chainMm10,619 chainMm10,706 chainMm10,954 chainNetCalJac3,625 chainNetCalJac3,712 chainNetCalJac3,960 chainNetGorGor3,622 chainNetGorGor3,709 chainNetGorGor3,957 chainNetMm10,622 chainNetMm10,709 chainNetMm10,957 chainNetTarSyr2,622 chainNetTarSyr2,709 chainNetTarSyr2,957 chainTarSyr2,619 chainTarSyr2,706 chainTarSyr2,954 netCalJac3,622 netCalJac3,709 netCalJac3,957 netGorGor3,619 netGorGor3,706 netGorGor3,954 netMm10,619 netMm10,706 netMm10,954 netTarSyr2,619 netTarSyr2,706 netTarSyr2,954 back chainCalJac3,602 chainGorGor3,599 chainMm10,599 chainNetCalJac3,605 chainNetGorGor3,602 chainNetMm10,602 chainNetTarSyr2,602 chainTarSyr2,599 netCalJac3,602 netGorGor3,599 netMm10,599 netTarSyr2,599 baertsch augustusGene,290 chainCalJac3,995 chainCalJac3,1053 chainCalJac3,1099 chainGorGor3,992 chainGorGor3,1050 chainGorGor3,1096 chainMm10,992 chainMm10,1050 chainMm10,1096 chainNetCalJac3,998 chainNetCalJac3,1056 chainNetCalJac3,1102 chainNetGorGor3,995 chainNetGorGor3,1053 chainNetGorGor3,1099 chainNetMm10,995 chainNetMm10,1053 chainNetMm10,1099 chainNetTarSyr2,995 chainNetTarSyr2,1053 chainNetTarSyr2,1099 chainTarSyr2,992 chainTarSyr2,1050 chainTarSyr2,1096 netCalJac3,995 netCalJac3,1053 netCalJac3,1099 netGorGor3,992 netGorGor3,1050 netGorGor3,1096 netMm10,992 netMm10,1050 netMm10,1096 netTarSyr2,992 netTarSyr2,1050 netTarSyr2,1096 band cytoBandIdeo,2 barker ensGene,170 ensemblGeneScaffold,109 base cpgIslandExt,46 cpgIslandExt,53 cpgIslandExt,234 cpgIslandExtUnmasked,49 cpgIslandExtUnmasked,56 cpgIslandExtUnmasked,237 cpgIslandSuper,46 cpgIslandSuper,53 cpgIslandSuper,234 mrna,359 mrna,413 mrna,421 mrna,433 quality,23 quality,40 rmsk,217 rmsk,219 rmsk,222 xenoRefGene,252 xenoRefGene,260 xenoRefGene,272 based augustusGene,28 chainCalJac3,329 chainCalJac3,355 chainGorGor3,326 chainGorGor3,352 chainMm10,326 chainMm10,352 chainNetCalJac3,332 chainNetCalJac3,358 chainNetGorGor3,329 chainNetGorGor3,355 chainNetMm10,329 chainNetMm10,355 chainNetTarSyr2,329 chainNetTarSyr2,355 chainTarSyr2,326 chainTarSyr2,352 genscan,26 netCalJac3,329 netCalJac3,355 netGorGor3,326 netGorGor3,352 netMm10,326 netMm10,352 netTarSyr2,326 netTarSyr2,352 bases cpgIslandExt,7 cpgIslandExt,353 cpgIslandExtUnmasked,10 cpgIslandExtUnmasked,356 cpgIslandSuper,7 cpgIslandSuper,353 gap,140 gc5Base,25 basis cpgIslandExt,289 cpgIslandExtUnmasked,292 cpgIslandSuper,289 be augustusGene,99 chainCalJac3,110 chainCalJac3,436 chainGorGor3,108 chainGorGor3,433 chainMm10,108 chainMm10,433 chainNetCalJac3,113 chainNetCalJac3,439 chainNetGorGor3,111 chainNetGorGor3,436 chainNetMm10,111 chainNetMm10,436 chainNetTarSyr2,111 chainNetTarSyr2,436 chainTarSyr2,108 chainTarSyr2,433 cpgIslandExt,37 cpgIslandExt,70 cpgIslandExt,187 cpgIslandExt,513 cpgIslandExt,532 cpgIslandExt,561 cpgIslandExt,572 cpgIslandExtUnmasked,40 cpgIslandExtUnmasked,73 cpgIslandExtUnmasked,190 cpgIslandExtUnmasked,516 cpgIslandExtUnmasked,535 cpgIslandExtUnmasked,564 cpgIslandExtUnmasked,575 cpgIslandSuper,37 cpgIslandSuper,70 cpgIslandSuper,187 cpgIslandSuper,513 cpgIslandSuper,532 cpgIslandSuper,561 cpgIslandSuper,572 ensGene,61 ensGene,104 ensGene,138 gc5Base,41 microsat,19 microsat,39 mrna,68 mrna,90 mrna,199 mrna,209 mrna,220 mrna,251 mrna,269 mrna,279 mrna,328 mrna,372 nestedRepeats,269 nestedRepeats,291 netCalJac3,110 netCalJac3,436 netGorGor3,108 netGorGor3,433 netMm10,108 netMm10,433 netTarSyr2,108 netTarSyr2,433 quality,57 rmsk,278 rmsk,284 rmsk,298 simpleRepeat,44 xenoRefGene,88 because cpgIslandExt,61 cpgIslandExt,107 cpgIslandExtUnmasked,64 cpgIslandExtUnmasked,110 cpgIslandSuper,61 cpgIslandSuper,107 bed3 windowmaskerSdust,76 been chainCalJac3,577 chainGorGor3,574 chainMm10,574 chainNetCalJac3,580 chainNetGorGor3,577 chainNetMm10,577 chainNetTarSyr2,577 chainTarSyr2,574 nestedRepeats,89 netCalJac3,577 netGorGor3,574 netMm10,574 netTarSyr2,574 rmsk,70 rmsk,109 before chainCalJac3,911 chainGorGor3,908 chainMm10,908 chainNetCalJac3,914 chainNetGorGor3,911 chainNetMm10,911 chainNetTarSyr2,911 chainTarSyr2,908 netCalJac3,911 netGorGor3,908 netMm10,908 netTarSyr2,908 below chainCalJac3,685 chainGorGor3,682 chainMm10,682 chainNetCalJac3,688 chainNetGorGor3,685 chainNetMm10,685 chainNetTarSyr2,685 chainTarSyr2,682 ensGene,54 ensemblGeneScaffold,97 genscan,154 genscan,168 nestedRepeats,68 netCalJac3,685 netGorGor3,682 netMm10,682 netTarSyr2,682 rmsk,104 benson microsat,102 microsat,112 microsat,114 mrna,464 mrna,492 simpleRepeat,64 simpleRepeat,72 simpleRepeat,74 best chainCalJac3,271 chainCalJac3,519 chainGorGor3,269 chainGorGor3,516 chainMm10,269 chainMm10,516 chainNetCalJac3,274 chainNetCalJac3,522 chainNetGorGor3,272 chainNetGorGor3,519 chainNetMm10,272 chainNetMm10,519 chainNetTarSyr2,272 chainNetTarSyr2,519 chainTarSyr2,269 chainTarSyr2,516 mrna,428 netCalJac3,271 netCalJac3,519 netGorGor3,269 netGorGor3,516 netMm10,269 netMm10,516 netTarSyr2,269 netTarSyr2,516 xenoRefGene,267 better mrna,55 between chainCalJac3,52 chainCalJac3,627 chainCalJac3,858 chainGorGor3,51 chainGorGor3,624 chainGorGor3,855 chainMm10,51 chainMm10,624 chainMm10,855 chainNetCalJac3,55 chainNetCalJac3,630 chainNetCalJac3,861 chainNetGorGor3,54 chainNetGorGor3,627 chainNetGorGor3,858 chainNetMm10,54 chainNetMm10,627 chainNetMm10,858 chainNetTarSyr2,54 chainNetTarSyr2,627 chainNetTarSyr2,858 chainTarSyr2,51 chainTarSyr2,624 chainTarSyr2,855 gap,127 gold,98 gold,103 mrna,18 netCalJac3,52 netCalJac3,627 netCalJac3,858 netGorGor3,51 netGorGor3,624 netGorGor3,855 netMm10,51 netMm10,624 netMm10,855 netTarSyr2,51 netTarSyr2,624 netTarSyr2,855 binary cpgIslandExt,570 cpgIslandExtUnmasked,573 cpgIslandSuper,570 biocomput chainCalJac3,1046 chainGorGor3,1043 chainMm10,1043 chainNetCalJac3,1049 chainNetGorGor3,1046 chainNetMm10,1046 chainNetTarSyr2,1046 chainTarSyr2,1043 netCalJac3,1046 netGorGor3,1043 netMm10,1043 netTarSyr2,1043 bioinformatics augustusGene,307 augustusGene,332 windowmaskerSdust,106 biol cpgIslandExt,615 cpgIslandExtUnmasked,618 cpgIslandSuper,615 genscan,222 biology genscan,200 birds augustusGene,203 birney ensGene,172 ensemblGeneScaffold,111 black ensemblGeneScaffold,32 gap,72 gap,111 blast-like mrna,522 xenoRefGene,306 blastz chainCalJac3,923 chainCalJac3,1110 chainGorGor3,920 chainGorGor3,1107 chainMm10,920 chainMm10,1107 chainNetCalJac3,926 chainNetCalJac3,1113 chainNetGorGor3,923 chainNetGorGor3,1110 chainNetMm10,923 chainNetMm10,1110 chainNetTarSyr2,923 chainNetTarSyr2,1110 chainTarSyr2,920 chainTarSyr2,1107 netCalJac3,923 netCalJac3,1110 netGorGor3,920 netGorGor3,1107 netMm10,920 netMm10,1107 netTarSyr2,920 netTarSyr2,1107 blat mrna,398 mrna,520 xenoRefGene,228 blat--the xenoRefGene,305 blocks chainCalJac3,45 chainCalJac3,650 chainCalJac3,671 chainGorGor3,44 chainGorGor3,647 chainGorGor3,668 chainMm10,44 chainMm10,647 chainMm10,668 chainNetCalJac3,48 chainNetCalJac3,653 chainNetCalJac3,674 chainNetGorGor3,47 chainNetGorGor3,650 chainNetGorGor3,671 chainNetMm10,47 chainNetMm10,650 chainNetMm10,671 chainNetTarSyr2,47 chainNetTarSyr2,650 chainNetTarSyr2,671 chainTarSyr2,44 chainTarSyr2,647 chainTarSyr2,668 gold,108 gold,135 netCalJac3,45 netCalJac3,650 netCalJac3,671 netGorGor3,44 netGorGor3,647 netGorGor3,668 netMm10,44 netMm10,647 netMm10,668 netTarSyr2,44 netTarSyr2,647 netTarSyr2,668 blog cpgIslandExt,553 cpgIslandExtUnmasked,556 cpgIslandSuper,553 ensGene,131 both chainCalJac3,98 chainCalJac3,119 chainCalJac3,173 chainCalJac3,901 chainGorGor3,96 chainGorGor3,117 chainGorGor3,171 chainGorGor3,898 chainMm10,96 chainMm10,117 chainMm10,171 chainMm10,898 chainNetCalJac3,101 chainNetCalJac3,122 chainNetCalJac3,176 chainNetCalJac3,904 chainNetGorGor3,99 chainNetGorGor3,120 chainNetGorGor3,174 chainNetGorGor3,901 chainNetMm10,99 chainNetMm10,120 chainNetMm10,174 chainNetMm10,901 chainNetTarSyr2,99 chainNetTarSyr2,120 chainNetTarSyr2,174 chainNetTarSyr2,901 chainTarSyr2,96 chainTarSyr2,117 chainTarSyr2,171 chainTarSyr2,898 netCalJac3,98 netCalJac3,119 netCalJac3,173 netCalJac3,901 netGorGor3,96 netGorGor3,117 netGorGor3,171 netGorGor3,898 netMm10,96 netMm10,117 netMm10,171 netMm10,898 netTarSyr2,96 netTarSyr2,117 netTarSyr2,171 netTarSyr2,898 xenoRefGene,126 xenoRefGene,197 bothgap chainCalJac3,752 chainGorGor3,749 chainMm10,749 chainNetCalJac3,755 chainNetGorGor3,752 chainNetMm10,752 chainNetTarSyr2,752 chainTarSyr2,749 netCalJac3,752 netGorGor3,749 netMm10,749 netTarSyr2,749 boundaries gold,83 box chainCalJac3,379 chainCalJac3,461 chainGorGor3,376 chainGorGor3,458 chainMm10,376 chainMm10,458 chainNetCalJac3,382 chainNetCalJac3,464 chainNetGorGor3,379 chainNetGorGor3,461 chainNetMm10,379 chainNetMm10,461 chainNetTarSyr2,379 chainNetTarSyr2,461 chainTarSyr2,376 chainTarSyr2,458 gap,112 mrna,154 mrna,165 mrna,205 netCalJac3,379 netCalJac3,461 netGorGor3,376 netGorGor3,458 netMm10,376 netMm10,458 netTarSyr2,376 netTarSyr2,458 xenoRefGene,216 boxes chainCalJac3,125 chainCalJac3,135 chainCalJac3,450 chainGorGor3,123 chainGorGor3,133 chainGorGor3,447 chainMm10,123 chainMm10,133 chainMm10,447 chainNetCalJac3,128 chainNetCalJac3,138 chainNetCalJac3,453 chainNetGorGor3,126 chainNetGorGor3,136 chainNetGorGor3,450 chainNetMm10,126 chainNetMm10,136 chainNetMm10,450 chainNetTarSyr2,126 chainNetTarSyr2,136 chainNetTarSyr2,450 chainTarSyr2,123 chainTarSyr2,133 chainTarSyr2,447 gap,73 mrna,125 nestedRepeats,126 netCalJac3,125 netCalJac3,135 netCalJac3,450 netGorGor3,123 netGorGor3,133 netGorGor3,447 netMm10,123 netMm10,133 netMm10,447 netTarSyr2,123 netTarSyr2,133 netTarSyr2,447 bp cpgIslandExt,272 cpgIslandExtUnmasked,275 cpgIslandSuper,272 branch-point augustusGene,55 bridge gold,133 bridged gap,101 brown gold,93 gold,107 xenoRefGene,322 browser chainCalJac3,981 chainGorGor3,978 chainMm10,978 chainNetCalJac3,984 chainNetGorGor3,981 chainNetMm10,981 chainNetTarSyr2,981 chainTarSyr2,978 cpgIslandExt,522 cpgIslandExtUnmasked,525 cpgIslandSuper,522 ensGene,67 mrna,172 mrna,296 mrna,313 nestedRepeats,243 netCalJac3,981 netGorGor3,978 netMm10,978 netTarSyr2,978 built augustusGene,51 augustusGene,67 burge genscan,22 genscan,146 genscan,166 genscan,173 genscan,180 genscan,207 but chainCalJac3,552 chainGorGor3,549 chainMm10,549 chainNetCalJac3,555 chainNetGorGor3,552 chainNetMm10,552 chainNetTarSyr2,552 chainTarSyr2,549 netCalJac3,552 netGorGor3,549 netMm10,549 netTarSyr2,549 rmsk,311 button chainCalJac3,350 chainGorGor3,347 chainMm10,347 chainNetCalJac3,353 chainNetGorGor3,350 chainNetMm10,350 chainNetTarSyr2,350 chainTarSyr2,347 netCalJac3,350 netGorGor3,347 netMm10,347 netTarSyr2,347 by augustusGene,147 augustusGene,266 augustusGene,282 chainCalJac3,112 chainCalJac3,128 chainCalJac3,320 chainCalJac3,383 chainCalJac3,420 chainCalJac3,438 chainCalJac3,818 chainCalJac3,930 chainCalJac3,949 chainCalJac3,969 chainCalJac3,993 chainCalJac3,1014 chainGorGor3,110 chainGorGor3,126 chainGorGor3,317 chainGorGor3,380 chainGorGor3,417 chainGorGor3,435 chainGorGor3,815 chainGorGor3,927 chainGorGor3,946 chainGorGor3,966 chainGorGor3,990 chainGorGor3,1011 chainMm10,110 chainMm10,126 chainMm10,317 chainMm10,380 chainMm10,417 chainMm10,435 chainMm10,815 chainMm10,927 chainMm10,946 chainMm10,966 chainMm10,990 chainMm10,1011 chainNetCalJac3,115 chainNetCalJac3,131 chainNetCalJac3,323 chainNetCalJac3,386 chainNetCalJac3,423 chainNetCalJac3,441 chainNetCalJac3,821 chainNetCalJac3,933 chainNetCalJac3,952 chainNetCalJac3,972 chainNetCalJac3,996 chainNetCalJac3,1017 chainNetGorGor3,113 chainNetGorGor3,129 chainNetGorGor3,320 chainNetGorGor3,383 chainNetGorGor3,420 chainNetGorGor3,438 chainNetGorGor3,818 chainNetGorGor3,930 chainNetGorGor3,949 chainNetGorGor3,969 chainNetGorGor3,993 chainNetGorGor3,1014 chainNetMm10,113 chainNetMm10,129 chainNetMm10,320 chainNetMm10,383 chainNetMm10,420 chainNetMm10,438 chainNetMm10,818 chainNetMm10,930 chainNetMm10,949 chainNetMm10,969 chainNetMm10,993 chainNetMm10,1014 chainNetTarSyr2,113 chainNetTarSyr2,129 chainNetTarSyr2,320 chainNetTarSyr2,383 chainNetTarSyr2,420 chainNetTarSyr2,438 chainNetTarSyr2,818 chainNetTarSyr2,930 chainNetTarSyr2,949 chainNetTarSyr2,969 chainNetTarSyr2,993 chainNetTarSyr2,1014 chainTarSyr2,110 chainTarSyr2,126 chainTarSyr2,317 chainTarSyr2,380 chainTarSyr2,417 chainTarSyr2,435 chainTarSyr2,815 chainTarSyr2,927 chainTarSyr2,946 chainTarSyr2,966 chainTarSyr2,990 chainTarSyr2,1011 cpgIslandExt,49 cpgIslandExt,194 cpgIslandExt,229 cpgIslandExt,406 cpgIslandExt,596 cpgIslandExtUnmasked,52 cpgIslandExtUnmasked,197 cpgIslandExtUnmasked,232 cpgIslandExtUnmasked,409 cpgIslandExtUnmasked,599 cpgIslandSuper,49 cpgIslandSuper,194 cpgIslandSuper,229 cpgIslandSuper,406 cpgIslandSuper,596 ensGene,15 ensemblGeneScaffold,61 gap,94 gc5Base,81 genscan,20 genscan,88 genscan,121 gold,86 microsat,110 mrna,214 mrna,460 nestedRepeats,8 nestedRepeats,91 nestedRepeats,129 netCalJac3,112 netCalJac3,128 netCalJac3,320 netCalJac3,383 netCalJac3,420 netCalJac3,438 netCalJac3,818 netCalJac3,930 netCalJac3,949 netCalJac3,969 netCalJac3,993 netCalJac3,1014 netGorGor3,110 netGorGor3,126 netGorGor3,317 netGorGor3,380 netGorGor3,417 netGorGor3,435 netGorGor3,815 netGorGor3,927 netGorGor3,946 netGorGor3,966 netGorGor3,990 netGorGor3,1011 netMm10,110 netMm10,126 netMm10,317 netMm10,380 netMm10,417 netMm10,435 netMm10,815 netMm10,927 netMm10,946 netMm10,966 netMm10,990 netMm10,1011 netTarSyr2,110 netTarSyr2,126 netTarSyr2,317 netTarSyr2,380 netTarSyr2,417 netTarSyr2,435 netTarSyr2,815 netTarSyr2,927 netTarSyr2,946 netTarSyr2,966 netTarSyr2,990 netTarSyr2,1011 quality,107 rmsk,4 rmsk,14 rmsk,50 simpleRepeat,6 simpleRepeat,22 simpleRepeat,70 windowmaskerSdust,6 windowmaskerSdust,20 xenoRefGene,102 xenoRefGene,107 xenoRefGene,171 xenoRefGene,189 xenoRefGene,195 xenoRefGene,292 xenoRefGene,297 c cpgIslandExt,44 cpgIslandExt,389 cpgIslandExtUnmasked,47 cpgIslandExtUnmasked,392 cpgIslandSuper,44 cpgIslandSuper,389 gc5Base,23 genscan,181 genscan,208 windowmaskerSdust,30 c-114100-125-31 chainCalJac3,680 chainMm10,677 chainNetCalJac3,683 chainNetMm10,680 netCalJac3,680 netMm10,677 c-17097-194-29 chainNetTarSyr2,680 chainTarSyr2,677 netTarSyr2,677 c-330100-318-236 chainGorGor3,677 chainNetGorGor3,680 netGorGor3,677 caenorhabditis augustusGene,212 calculated cpgIslandExt,369 cpgIslandExtUnmasked,372 cpgIslandSuper,369 calculation cpgIslandExt,399 cpgIslandExtUnmasked,402 cpgIslandSuper,399 california chainCalJac3,965 chainCalJac3,1011 chainGorGor3,962 chainGorGor3,1008 chainMm10,962 chainMm10,1008 chainNetCalJac3,968 chainNetCalJac3,1014 chainNetGorGor3,965 chainNetGorGor3,1011 chainNetMm10,965 chainNetMm10,1011 chainNetTarSyr2,965 chainNetTarSyr2,1011 chainTarSyr2,962 chainTarSyr2,1008 netCalJac3,965 netCalJac3,1011 netGorGor3,962 netGorGor3,1008 netMm10,962 netMm10,1008 netTarSyr2,962 netTarSyr2,1008 caljac3 chainCalJac3,8 chainCalJac3,71 chainCalJac3,312 chainNetCalJac3,9 chainNetCalJac3,74 chainNetCalJac3,315 chainNetCalJac3Viewchain,7 chainNetCalJac3Viewnet,7 netCalJac3,8 netCalJac3,71 netCalJac3,312 cameron ensGene,174 ensemblGeneScaffold,113 can augustusGene,98 chainCalJac3,93 chainCalJac3,109 chainGorGor3,91 chainGorGor3,107 chainMm10,91 chainMm10,107 chainNetCalJac3,96 chainNetCalJac3,112 chainNetGorGor3,94 chainNetGorGor3,110 chainNetMm10,94 chainNetMm10,110 chainNetTarSyr2,94 chainNetTarSyr2,110 chainTarSyr2,91 chainTarSyr2,107 cpgIslandExt,512 cpgIslandExt,530 cpgIslandExt,560 cpgIslandExt,571 cpgIslandExtUnmasked,515 cpgIslandExtUnmasked,533 cpgIslandExtUnmasked,563 cpgIslandExtUnmasked,574 cpgIslandSuper,512 cpgIslandSuper,530 cpgIslandSuper,560 cpgIslandSuper,571 ensGene,60 ensGene,103 ensGene,137 mrna,67 mrna,198 netCalJac3,93 netCalJac3,109 netGorGor3,91 netGorGor3,107 netMm10,91 netMm10,107 netTarSyr2,91 netTarSyr2,107 rmsk,116 simpleRepeat,35 xenoRefGene,87 cases chainCalJac3,195 chainCalJac3,407 chainGorGor3,193 chainGorGor3,404 chainMm10,193 chainMm10,404 chainNetCalJac3,198 chainNetCalJac3,410 chainNetGorGor3,196 chainNetGorGor3,407 chainNetMm10,196 chainNetMm10,407 chainNetTarSyr2,196 chainNetTarSyr2,407 chainTarSyr2,193 chainTarSyr2,404 netCalJac3,195 netCalJac3,407 netGorGor3,193 netGorGor3,404 netMm10,193 netMm10,404 netTarSyr2,193 netTarSyr2,404 categorized chainCalJac3,508 chainGorGor3,505 chainMm10,505 chainNetCalJac3,511 chainNetGorGor3,508 chainNetMm10,508 chainNetTarSyr2,508 chainTarSyr2,505 netCalJac3,508 netGorGor3,505 netMm10,505 netTarSyr2,505 cauldron chainCalJac3,1063 chainGorGor3,1060 chainMm10,1060 chainNetCalJac3,1066 chainNetGorGor3,1063 chainNetMm10,1063 chainNetTarSyr2,1063 chainTarSyr2,1060 netCalJac3,1063 netGorGor3,1060 netMm10,1060 netTarSyr2,1060 cause chainCalJac3,490 chainGorGor3,487 chainMm10,487 chainNetCalJac3,493 chainNetGorGor3,490 chainNetMm10,490 chainNetTarSyr2,490 chainTarSyr2,487 netCalJac3,490 netGorGor3,487 netMm10,487 netTarSyr2,487 caused chainCalJac3,111 chainGorGor3,109 chainMm10,109 chainNetCalJac3,114 chainNetGorGor3,112 chainNetMm10,112 chainNetTarSyr2,112 chainTarSyr2,109 netCalJac3,111 netGorGor3,109 netMm10,109 netTarSyr2,109 cavanaugh mrna,466 cdna augustusGene,299 cerevisiae augustusGene,222 certain nestedRepeats,294 rmsk,301 cg cpgIslandExt,243 cpgIslandExt,281 cpgIslandExt,339 cpgIslandExtUnmasked,246 cpgIslandExtUnmasked,284 cpgIslandExtUnmasked,342 cpgIslandSuper,243 cpgIslandSuper,281 cpgIslandSuper,339 chain chainCalJac3,2 chainCalJac3,28 chainCalJac3,58 chainCalJac3,61 chainCalJac3,122 chainCalJac3,275 chainCalJac3,318 chainCalJac3,413 chainCalJac3,468 chainCalJac3,572 chainCalJac3,778 chainCalJac3,821 chainCalJac3,832 chainCalJac3,840 chainCalJac3,845 chainCalJac3,868 chainCalJac3,877 chainGorGor3,2 chainGorGor3,27 chainGorGor3,57 chainGorGor3,60 chainGorGor3,120 chainGorGor3,273 chainGorGor3,315 chainGorGor3,410 chainGorGor3,465 chainGorGor3,569 chainGorGor3,775 chainGorGor3,818 chainGorGor3,829 chainGorGor3,837 chainGorGor3,842 chainGorGor3,865 chainGorGor3,874 chainMm10,2 chainMm10,27 chainMm10,57 chainMm10,60 chainMm10,120 chainMm10,273 chainMm10,315 chainMm10,410 chainMm10,465 chainMm10,569 chainMm10,775 chainMm10,818 chainMm10,829 chainMm10,837 chainMm10,842 chainMm10,865 chainMm10,874 chainNetCalJac3,2 chainNetCalJac3,10 chainNetCalJac3,31 chainNetCalJac3,61 chainNetCalJac3,64 chainNetCalJac3,125 chainNetCalJac3,278 chainNetCalJac3,321 chainNetCalJac3,416 chainNetCalJac3,471 chainNetCalJac3,575 chainNetCalJac3,781 chainNetCalJac3,824 chainNetCalJac3,835 chainNetCalJac3,843 chainNetCalJac3,848 chainNetCalJac3,871 chainNetCalJac3,880 chainNetCalJac3Viewchain,1 chainNetCalJac3Viewchain,8 chainNetCalJac3Viewnet,8 chainNetGorGor3,2 chainNetGorGor3,9 chainNetGorGor3,30 chainNetGorGor3,60 chainNetGorGor3,63 chainNetGorGor3,123 chainNetGorGor3,276 chainNetGorGor3,318 chainNetGorGor3,413 chainNetGorGor3,468 chainNetGorGor3,572 chainNetGorGor3,778 chainNetGorGor3,821 chainNetGorGor3,832 chainNetGorGor3,840 chainNetGorGor3,845 chainNetGorGor3,868 chainNetGorGor3,877 chainNetGorGor3Viewchain,1 chainNetGorGor3Viewchain,7 chainNetGorGor3Viewnet,7 chainNetMm10,2 chainNetMm10,9 chainNetMm10,30 chainNetMm10,60 chainNetMm10,63 chainNetMm10,123 chainNetMm10,276 chainNetMm10,318 chainNetMm10,413 chainNetMm10,468 chainNetMm10,572 chainNetMm10,778 chainNetMm10,821 chainNetMm10,832 chainNetMm10,840 chainNetMm10,845 chainNetMm10,868 chainNetMm10,877 chainNetMm10Viewchain,1 chainNetMm10Viewchain,7 chainNetMm10Viewnet,7 chainNetTarSyr2,2 chainNetTarSyr2,9 chainNetTarSyr2,30 chainNetTarSyr2,60 chainNetTarSyr2,63 chainNetTarSyr2,123 chainNetTarSyr2,276 chainNetTarSyr2,318 chainNetTarSyr2,413 chainNetTarSyr2,468 chainNetTarSyr2,572 chainNetTarSyr2,778 chainNetTarSyr2,821 chainNetTarSyr2,832 chainNetTarSyr2,840 chainNetTarSyr2,845 chainNetTarSyr2,868 chainNetTarSyr2,877 chainNetTarSyr2Viewchain,1 chainNetTarSyr2Viewchain,7 chainNetTarSyr2Viewnet,7 chainTarSyr2,2 chainTarSyr2,27 chainTarSyr2,57 chainTarSyr2,60 chainTarSyr2,120 chainTarSyr2,273 chainTarSyr2,315 chainTarSyr2,410 chainTarSyr2,465 chainTarSyr2,569 chainTarSyr2,775 chainTarSyr2,818 chainTarSyr2,829 chainTarSyr2,837 chainTarSyr2,842 chainTarSyr2,865 chainTarSyr2,874 netCalJac3,28 netCalJac3,58 netCalJac3,61 netCalJac3,122 netCalJac3,275 netCalJac3,318 netCalJac3,413 netCalJac3,468 netCalJac3,572 netCalJac3,778 netCalJac3,821 netCalJac3,832 netCalJac3,840 netCalJac3,845 netCalJac3,868 netCalJac3,877 netGorGor3,27 netGorGor3,57 netGorGor3,60 netGorGor3,120 netGorGor3,273 netGorGor3,315 netGorGor3,410 netGorGor3,465 netGorGor3,569 netGorGor3,775 netGorGor3,818 netGorGor3,829 netGorGor3,837 netGorGor3,842 netGorGor3,865 netGorGor3,874 netMm10,27 netMm10,57 netMm10,60 netMm10,120 netMm10,273 netMm10,315 netMm10,410 netMm10,465 netMm10,569 netMm10,775 netMm10,818 netMm10,829 netMm10,837 netMm10,842 netMm10,865 netMm10,874 netTarSyr2,27 netTarSyr2,57 netTarSyr2,60 netTarSyr2,120 netTarSyr2,273 netTarSyr2,315 netTarSyr2,410 netTarSyr2,465 netTarSyr2,569 netTarSyr2,775 netTarSyr2,818 netTarSyr2,829 netTarSyr2,837 netTarSyr2,842 netTarSyr2,865 netTarSyr2,874 chained chainCalJac3,9 chainGorGor3,8 chainMm10,8 chainTarSyr2,8 chainnet chainCalJac3,795 chainCalJac3,1000 chainGorGor3,792 chainGorGor3,997 chainMm10,792 chainMm10,997 chainNetCalJac3,798 chainNetCalJac3,1003 chainNetGorGor3,795 chainNetGorGor3,1000 chainNetMm10,795 chainNetMm10,1000 chainNetTarSyr2,795 chainNetTarSyr2,1000 chainTarSyr2,792 chainTarSyr2,997 netCalJac3,795 netCalJac3,1000 netGorGor3,792 netGorGor3,997 netMm10,792 netMm10,997 netTarSyr2,792 netTarSyr2,997 chains chainCalJac3,198 chainCalJac3,210 chainCalJac3,221 chainCalJac3,323 chainCalJac3,362 chainCalJac3,395 chainCalJac3,400 chainCalJac3,422 chainCalJac3,434 chainCalJac3,441 chainCalJac3,498 chainCalJac3,668 chainCalJac3,683 chainCalJac3,697 chainCalJac3,766 chainCalJac3,787 chainCalJac3,802 chainCalJac3,862 chainCalJac3,893 chainCalJac3,988 chainGorGor3,196 chainGorGor3,208 chainGorGor3,219 chainGorGor3,320 chainGorGor3,359 chainGorGor3,392 chainGorGor3,397 chainGorGor3,419 chainGorGor3,431 chainGorGor3,438 chainGorGor3,495 chainGorGor3,665 chainGorGor3,680 chainGorGor3,694 chainGorGor3,763 chainGorGor3,784 chainGorGor3,799 chainGorGor3,859 chainGorGor3,890 chainGorGor3,985 chainMm10,196 chainMm10,208 chainMm10,219 chainMm10,320 chainMm10,359 chainMm10,392 chainMm10,397 chainMm10,419 chainMm10,431 chainMm10,438 chainMm10,495 chainMm10,665 chainMm10,680 chainMm10,694 chainMm10,763 chainMm10,784 chainMm10,799 chainMm10,859 chainMm10,890 chainMm10,985 chainNetCalJac3,201 chainNetCalJac3,213 chainNetCalJac3,224 chainNetCalJac3,326 chainNetCalJac3,365 chainNetCalJac3,398 chainNetCalJac3,403 chainNetCalJac3,425 chainNetCalJac3,437 chainNetCalJac3,444 chainNetCalJac3,501 chainNetCalJac3,671 chainNetCalJac3,686 chainNetCalJac3,700 chainNetCalJac3,769 chainNetCalJac3,790 chainNetCalJac3,805 chainNetCalJac3,865 chainNetCalJac3,896 chainNetCalJac3,991 chainNetGorGor3,199 chainNetGorGor3,211 chainNetGorGor3,222 chainNetGorGor3,323 chainNetGorGor3,362 chainNetGorGor3,395 chainNetGorGor3,400 chainNetGorGor3,422 chainNetGorGor3,434 chainNetGorGor3,441 chainNetGorGor3,498 chainNetGorGor3,668 chainNetGorGor3,683 chainNetGorGor3,697 chainNetGorGor3,766 chainNetGorGor3,787 chainNetGorGor3,802 chainNetGorGor3,862 chainNetGorGor3,893 chainNetGorGor3,988 chainNetMm10,199 chainNetMm10,211 chainNetMm10,222 chainNetMm10,323 chainNetMm10,362 chainNetMm10,395 chainNetMm10,400 chainNetMm10,422 chainNetMm10,434 chainNetMm10,441 chainNetMm10,498 chainNetMm10,668 chainNetMm10,683 chainNetMm10,697 chainNetMm10,766 chainNetMm10,787 chainNetMm10,802 chainNetMm10,862 chainNetMm10,893 chainNetMm10,988 chainNetTarSyr2,199 chainNetTarSyr2,211 chainNetTarSyr2,222 chainNetTarSyr2,323 chainNetTarSyr2,362 chainNetTarSyr2,395 chainNetTarSyr2,400 chainNetTarSyr2,422 chainNetTarSyr2,434 chainNetTarSyr2,441 chainNetTarSyr2,498 chainNetTarSyr2,668 chainNetTarSyr2,683 chainNetTarSyr2,697 chainNetTarSyr2,766 chainNetTarSyr2,787 chainNetTarSyr2,802 chainNetTarSyr2,862 chainNetTarSyr2,893 chainNetTarSyr2,988 chainTarSyr2,196 chainTarSyr2,208 chainTarSyr2,219 chainTarSyr2,320 chainTarSyr2,359 chainTarSyr2,392 chainTarSyr2,397 chainTarSyr2,419 chainTarSyr2,431 chainTarSyr2,438 chainTarSyr2,495 chainTarSyr2,665 chainTarSyr2,680 chainTarSyr2,694 chainTarSyr2,763 chainTarSyr2,784 chainTarSyr2,799 chainTarSyr2,859 chainTarSyr2,890 chainTarSyr2,985 netCalJac3,198 netCalJac3,210 netCalJac3,221 netCalJac3,323 netCalJac3,362 netCalJac3,395 netCalJac3,400 netCalJac3,422 netCalJac3,434 netCalJac3,441 netCalJac3,498 netCalJac3,668 netCalJac3,683 netCalJac3,697 netCalJac3,766 netCalJac3,787 netCalJac3,802 netCalJac3,862 netCalJac3,893 netCalJac3,988 netGorGor3,196 netGorGor3,208 netGorGor3,219 netGorGor3,320 netGorGor3,359 netGorGor3,392 netGorGor3,397 netGorGor3,419 netGorGor3,431 netGorGor3,438 netGorGor3,495 netGorGor3,665 netGorGor3,680 netGorGor3,694 netGorGor3,763 netGorGor3,784 netGorGor3,799 netGorGor3,859 netGorGor3,890 netGorGor3,985 netMm10,196 netMm10,208 netMm10,219 netMm10,320 netMm10,359 netMm10,392 netMm10,397 netMm10,419 netMm10,431 netMm10,438 netMm10,495 netMm10,665 netMm10,680 netMm10,694 netMm10,763 netMm10,784 netMm10,799 netMm10,859 netMm10,890 netMm10,985 netTarSyr2,196 netTarSyr2,208 netTarSyr2,219 netTarSyr2,320 netTarSyr2,359 netTarSyr2,392 netTarSyr2,397 netTarSyr2,419 netTarSyr2,431 netTarSyr2,438 netTarSyr2,495 netTarSyr2,665 netTarSyr2,680 netTarSyr2,694 netTarSyr2,763 netTarSyr2,784 netTarSyr2,799 netTarSyr2,859 netTarSyr2,890 netTarSyr2,985 change cpgIslandExt,210 cpgIslandExtUnmasked,213 cpgIslandSuper,210 mrna,71 changed rmsk,285 characteristic mrna,276 check chainCalJac3,345 chainGorGor3,342 chainMm10,342 chainNetCalJac3,348 chainNetGorGor3,345 chainNetMm10,345 chainNetTarSyr2,345 chainTarSyr2,342 netCalJac3,345 netGorGor3,342 netMm10,342 netTarSyr2,342 chen ensGene,176 ensemblGeneScaffold,115 chiaromonte chainCalJac3,1033 chainGorGor3,1030 chainMm10,1030 chainNetCalJac3,1036 chainNetGorGor3,1033 chainNetMm10,1033 chainNetTarSyr2,1033 chainTarSyr2,1030 netCalJac3,1033 netGorGor3,1030 netMm10,1030 netTarSyr2,1030 chicken augustusGene,204 augustusGene,262 choose augustusGene,171 cpgIslandExt,581 cpgIslandExtUnmasked,584 cpgIslandSuper,581 mrna,232 mrna,271 chosen mrna,294 chr4 chainCalJac3,377 chainGorGor3,374 chainMm10,374 chainNetCalJac3,380 chainNetGorGor3,377 chainNetMm10,377 chainNetTarSyr2,377 chainTarSyr2,374 netCalJac3,377 netGorGor3,374 netMm10,374 netTarSyr2,374 chris genscan,21 genscan,172 chromosome chainCalJac3,251 chainCalJac3,332 chainCalJac3,357 chainCalJac3,365 chainCalJac3,375 chainCalJac3,384 chainCalJac3,531 chainCalJac3,546 chainCalJac3,562 chainCalJac3,631 chainCalJac3,637 chainGorGor3,249 chainGorGor3,329 chainGorGor3,354 chainGorGor3,362 chainGorGor3,372 chainGorGor3,381 chainGorGor3,528 chainGorGor3,543 chainGorGor3,559 chainGorGor3,628 chainGorGor3,634 chainMm10,249 chainMm10,329 chainMm10,354 chainMm10,362 chainMm10,372 chainMm10,381 chainMm10,528 chainMm10,543 chainMm10,559 chainMm10,628 chainMm10,634 chainNetCalJac3,254 chainNetCalJac3,335 chainNetCalJac3,360 chainNetCalJac3,368 chainNetCalJac3,378 chainNetCalJac3,387 chainNetCalJac3,534 chainNetCalJac3,549 chainNetCalJac3,565 chainNetCalJac3,634 chainNetCalJac3,640 chainNetGorGor3,252 chainNetGorGor3,332 chainNetGorGor3,357 chainNetGorGor3,365 chainNetGorGor3,375 chainNetGorGor3,384 chainNetGorGor3,531 chainNetGorGor3,546 chainNetGorGor3,562 chainNetGorGor3,631 chainNetGorGor3,637 chainNetMm10,252 chainNetMm10,332 chainNetMm10,357 chainNetMm10,365 chainNetMm10,375 chainNetMm10,384 chainNetMm10,531 chainNetMm10,546 chainNetMm10,562 chainNetMm10,631 chainNetMm10,637 chainNetTarSyr2,252 chainNetTarSyr2,332 chainNetTarSyr2,357 chainNetTarSyr2,365 chainNetTarSyr2,375 chainNetTarSyr2,384 chainNetTarSyr2,531 chainNetTarSyr2,546 chainNetTarSyr2,562 chainNetTarSyr2,631 chainNetTarSyr2,637 chainTarSyr2,249 chainTarSyr2,329 chainTarSyr2,354 chainTarSyr2,362 chainTarSyr2,372 chainTarSyr2,381 chainTarSyr2,528 chainTarSyr2,543 chainTarSyr2,559 chainTarSyr2,628 chainTarSyr2,634 cytoBandIdeo,1 netCalJac3,251 netCalJac3,332 netCalJac3,357 netCalJac3,365 netCalJac3,375 netCalJac3,384 netCalJac3,531 netCalJac3,546 netCalJac3,562 netCalJac3,631 netCalJac3,637 netGorGor3,249 netGorGor3,329 netGorGor3,354 netGorGor3,362 netGorGor3,372 netGorGor3,381 netGorGor3,528 netGorGor3,543 netGorGor3,559 netGorGor3,628 netGorGor3,634 netMm10,249 netMm10,329 netMm10,354 netMm10,362 netMm10,372 netMm10,381 netMm10,528 netMm10,543 netMm10,559 netMm10,628 netMm10,634 netTarSyr2,249 netTarSyr2,329 netTarSyr2,354 netTarSyr2,362 netTarSyr2,372 netTarSyr2,381 netTarSyr2,528 netTarSyr2,543 netTarSyr2,559 netTarSyr2,628 netTarSyr2,634 chromosome-based chainCalJac3,325 chainGorGor3,322 chainMm10,322 chainNetCalJac3,328 chainNetGorGor3,325 chainNetMm10,325 chainNetTarSyr2,325 chainTarSyr2,322 netCalJac3,325 netGorGor3,322 netMm10,322 netTarSyr2,322 circle rmsk,202 cited cpgIslandExt,374 cpgIslandExtUnmasked,377 cpgIslandSuper,374 clark ensGene,178 ensemblGeneScaffold,117 mrna,468 class rmsk,199 rmsk,253 classes rmsk,150 classification rmsk,266 rmsk,282 clawson gc5Base,83 quality,109 click chainCalJac3,458 chainCalJac3,472 chainGorGor3,455 chainGorGor3,469 chainMm10,455 chainMm10,469 chainNetCalJac3,461 chainNetCalJac3,475 chainNetGorGor3,458 chainNetGorGor3,472 chainNetMm10,458 chainNetMm10,472 chainNetTarSyr2,458 chainNetTarSyr2,472 chainTarSyr2,455 chainTarSyr2,469 gc5Base,56 netCalJac3,458 netCalJac3,472 netGorGor3,455 netGorGor3,469 netMm10,455 netMm10,469 netTarSyr2,455 netTarSyr2,469 quality,72 xenoRefGene,110 xenoRefGene,214 clipped nestedRepeats,224 closest augustusGene,241 cm xenoRefGene,333 code quality,104 windowmaskerSdust,34 coding simpleRepeat,38 xenoRefGene,212 codon genscan,100 genscan,122 mrna,332 mrna,357 xenoRefGene,138 xenoRefGene,145 xenoRefGene,160 xenoRefGene,190 codons genscan,89 genscan,93 xenoRefGene,165 xenoRefGene,172 collapsed nestedRepeats,173 collection xenoRefGene,33 color chainCalJac3,353 chainGorGor3,350 chainMm10,350 chainNetCalJac3,356 chainNetGorGor3,353 chainNetMm10,353 chainNetTarSyr2,353 chainTarSyr2,350 genscan,86 genscan,96 mrna,77 mrna,273 netCalJac3,353 netGorGor3,350 netMm10,350 netTarSyr2,350 rmsk,207 xenoRefGene,58 xenoRefGene,169 coloration gold,94 colored chainCalJac3,328 chainGorGor3,325 chainMm10,325 chainNetCalJac3,331 chainNetGorGor3,328 chainNetMm10,328 chainNetTarSyr2,328 chainTarSyr2,325 mrna,373 netCalJac3,328 netGorGor3,325 netMm10,325 netTarSyr2,325 coloring chainCalJac3,344 chainGorGor3,341 chainMm10,341 chainNetCalJac3,347 chainNetGorGor3,344 chainNetMm10,344 chainNetTarSyr2,344 chainTarSyr2,341 genscan,116 mrna,333 mrna,360 netCalJac3,344 netGorGor3,341 netMm10,341 netTarSyr2,341 xenoRefGene,139 xenoRefGene,146 xenoRefGene,184 colors xenoRefGene,81 xenoRefGene,161 column nestedRepeats,107 combination mrna,235 combined rmsk,232 command cpgIslandExt,409 cpgIslandExt,503 cpgIslandExtUnmasked,412 cpgIslandExtUnmasked,506 cpgIslandSuper,409 cpgIslandSuper,503 common cpgIslandExt,30 cpgIslandExtUnmasked,33 cpgIslandSuper,30 comparative chainCalJac3,11 chainGorGor3,10 chainMm10,10 chainNetCalJac3,14 chainNetCalJac3Viewchain,12 chainNetCalJac3Viewnet,12 chainNetGorGor3,13 chainNetGorGor3Viewchain,11 chainNetGorGor3Viewnet,11 chainNetMm10,13 chainNetMm10Viewchain,11 chainNetMm10Viewnet,11 chainNetTarSyr2,13 chainNetTarSyr2Viewchain,11 chainNetTarSyr2Viewnet,11 chainTarSyr2,10 netCalJac3,11 netGorGor3,10 netMm10,10 netTarSyr2,10 compare mrna,342 xenoRefGene,155 comparison genscan,109 complete genscan,213 completely xenoRefGene,137 complex chainCalJac3,166 chainGorGor3,164 chainMm10,164 chainNetCalJac3,169 chainNetGorGor3,167 chainNetMm10,167 chainNetTarSyr2,167 chainTarSyr2,164 netCalJac3,166 netGorGor3,164 netMm10,164 netTarSyr2,164 complexity nestedRepeats,40 rmsk,30 rmsk,182 component gold,136 compositional genscan,41 computational genscan,196 conditional augustusGene,118 configuration chainCalJac3,317 chainGorGor3,314 chainMm10,314 chainNetCalJac3,320 chainNetGorGor3,317 chainNetMm10,317 chainNetTarSyr2,317 chainTarSyr2,314 gc5Base,60 gc5Base,69 genscan,64 genscan,84 mrna,30 nestedRepeats,114 netCalJac3,317 netGorGor3,314 netMm10,314 netTarSyr2,314 quality,75 quality,83 rmsk,138 xenoRefGene,46 configured gc5Base,42 mrna,329 quality,58 xenoRefGene,89 constructed cpgIslandExt,322 cpgIslandExt,495 cpgIslandExtUnmasked,325 cpgIslandExtUnmasked,498 cpgIslandSuper,322 cpgIslandSuper,495 construction cpgIslandExt,311 cpgIslandExtUnmasked,314 cpgIslandSuper,311 consult mrna,166 contained chainCalJac3,894 chainGorGor3,891 chainMm10,891 chainNetCalJac3,897 chainNetGorGor3,894 chainNetMm10,894 chainNetTarSyr2,894 chainTarSyr2,891 netCalJac3,894 netGorGor3,891 netMm10,891 netTarSyr2,891 contains gap,118 mrna,191 xenoRefGene,142 content augustusGene,71 cpgIslandExt,263 cpgIslandExtUnmasked,266 cpgIslandSuper,263 gc5Base,31 contig ensemblGeneScaffold,53 gold,82 contigs ensemblGeneScaffold,25 gap,85 gap,131 gold,74 gold,99 gold,116 controls cpgIslandExt,217 cpgIslandExtUnmasked,220 cpgIslandSuper,217 xenoRefGene,92 conventions chainCalJac3,315 chainGorGor3,312 chainMm10,312 chainNetCalJac3,318 chainNetGorGor3,315 chainNetMm10,315 chainNetTarSyr2,315 chainTarSyr2,312 genscan,62 genscan,70 mrna,28 mrna,36 nestedRepeats,112 netCalJac3,315 netGorGor3,312 netMm10,312 netTarSyr2,312 rmsk,136 xenoRefGene,44 xenoRefGene,52 converted chainCalJac3,608 chainGorGor3,605 chainMm10,605 chainNetCalJac3,611 chainNetGorGor3,608 chainNetMm10,608 chainNetTarSyr2,608 chainTarSyr2,605 netCalJac3,608 netGorGor3,605 netMm10,605 netTarSyr2,605 coordinates ensemblGeneScaffold,20 copies microsat,80 corresponds mrna,174 count cpgIslandExt,334 cpgIslandExt,357 cpgIslandExtUnmasked,337 cpgIslandExtUnmasked,360 cpgIslandSuper,334 cpgIslandSuper,357 gap,132 counts gold,143 covered chainCalJac3,817 chainGorGor3,814 chainMm10,814 chainNetCalJac3,820 chainNetGorGor3,817 chainNetMm10,817 chainNetTarSyr2,817 chainTarSyr2,814 gap,25 gold,27 netCalJac3,817 netGorGor3,814 netMm10,814 netTarSyr2,814 cox ensGene,180 ensemblGeneScaffold,119 cpg cpgIslandExt,1 cpgIslandExt,3 cpgIslandExt,15 cpgIslandExt,26 cpgIslandExt,55 cpgIslandExt,147 cpgIslandExt,176 cpgIslandExt,225 cpgIslandExt,316 cpgIslandExt,319 cpgIslandExt,333 cpgIslandExt,346 cpgIslandExt,351 cpgIslandExt,356 cpgIslandExt,367 cpgIslandExt,382 cpgIslandExt,385 cpgIslandExt,506 cpgIslandExt,608 cpgIslandExtUnmasked,2 cpgIslandExtUnmasked,3 cpgIslandExtUnmasked,18 cpgIslandExtUnmasked,29 cpgIslandExtUnmasked,58 cpgIslandExtUnmasked,150 cpgIslandExtUnmasked,179 cpgIslandExtUnmasked,228 cpgIslandExtUnmasked,319 cpgIslandExtUnmasked,322 cpgIslandExtUnmasked,336 cpgIslandExtUnmasked,349 cpgIslandExtUnmasked,354 cpgIslandExtUnmasked,359 cpgIslandExtUnmasked,370 cpgIslandExtUnmasked,385 cpgIslandExtUnmasked,388 cpgIslandExtUnmasked,509 cpgIslandExtUnmasked,611 cpgIslandSuper,1 cpgIslandSuper,3 cpgIslandSuper,15 cpgIslandSuper,26 cpgIslandSuper,55 cpgIslandSuper,147 cpgIslandSuper,176 cpgIslandSuper,225 cpgIslandSuper,316 cpgIslandSuper,319 cpgIslandSuper,333 cpgIslandSuper,346 cpgIslandSuper,351 cpgIslandSuper,356 cpgIslandSuper,367 cpgIslandSuper,382 cpgIslandSuper,385 cpgIslandSuper,506 cpgIslandSuper,608 cpg_lh cpgIslandExt,418 cpgIslandExt,558 cpgIslandExt,568 cpgIslandExt,580 cpgIslandExtUnmasked,421 cpgIslandExtUnmasked,561 cpgIslandExtUnmasked,571 cpgIslandExtUnmasked,583 cpgIslandSuper,418 cpgIslandSuper,558 cpgIslandSuper,568 cpgIslandSuper,580 cpg_lh.err cpgIslandExt,423 cpgIslandExtUnmasked,426 cpgIslandSuper,423 cpgisland.bed cpgIslandExt,489 cpgIslandExtUnmasked,492 cpgIslandSuper,489 cpgislandext cpgIslandExt,566 cpgIslandExtUnmasked,569 cpgIslandSuper,566 cpgs cpgIslandExt,115 cpgIslandExt,152 cpgIslandExtUnmasked,118 cpgIslandExtUnmasked,155 cpgIslandSuper,115 cpgIslandSuper,152 create windowmaskerSdust,48 created chainCalJac3,992 chainGorGor3,989 chainMm10,989 chainNetCalJac3,995 chainNetGorGor3,992 chainNetMm10,992 chainNetTarSyr2,992 chainTarSyr2,989 ensemblGeneScaffold,67 microsat,89 netCalJac3,992 netGorGor3,989 netMm10,989 netTarSyr2,989 rmsk,13 creates chainCalJac3,642 chainGorGor3,639 chainMm10,639 chainNetCalJac3,645 chainNetGorGor3,642 chainNetMm10,642 chainNetTarSyr2,642 chainTarSyr2,639 netCalJac3,642 netGorGor3,639 netMm10,639 netTarSyr2,639 credits augustusGene,247 chainCalJac3,918 chainGorGor3,915 chainMm10,915 chainNetCalJac3,921 chainNetGorGor3,918 chainNetMm10,918 chainNetTarSyr2,918 chainTarSyr2,915 cpgIslandExt,584 cpgIslandExtUnmasked,587 cpgIslandSuper,584 ensGene,145 ensemblGeneScaffold,98 gc5Base,71 genscan,169 microsat,104 mrna,441 nestedRepeats,302 netCalJac3,918 netGorGor3,915 netMm10,915 netTarSyr2,915 quality,85 rmsk,325 simpleRepeat,66 xenoRefGene,280 criteria cpgIslandExt,261 cpgIslandExtUnmasked,264 cpgIslandSuper,261 mrna,249 mrna,267 mrna,305 mrna,323 cruz chainCalJac3,968 chainCalJac3,1013 chainGorGor3,965 chainGorGor3,1010 chainMm10,965 chainMm10,1010 chainNetCalJac3,971 chainNetCalJac3,1016 chainNetGorGor3,968 chainNetGorGor3,1013 chainNetMm10,968 chainNetMm10,1013 chainNetTarSyr2,968 chainNetTarSyr2,1013 chainTarSyr2,965 chainTarSyr2,1010 netCalJac3,968 netCalJac3,1013 netGorGor3,965 netGorGor3,1010 netMm10,965 netMm10,1010 netTarSyr2,965 netTarSyr2,1010 cs cpgIslandExt,63 cpgIslandExt,101 cpgIslandExt,296 cpgIslandExtUnmasked,66 cpgIslandExtUnmasked,104 cpgIslandExtUnmasked,299 cpgIslandSuper,63 cpgIslandSuper,101 cpgIslandSuper,296 cuff ensGene,182 ensemblGeneScaffold,121 culex augustusGene,220 curated xenoRefGene,296 xenoRefGene,373 curator rmsk,261 curr nestedRepeats,384 nestedRepeats,406 rmsk,407 rmsk,429 current mrna,109 nestedRepeats,250 currently gold,79 curwen ensGene,184 ensemblGeneScaffold,123 cytosine cpgIslandExt,45 cpgIslandExtUnmasked,48 cpgIslandSuper,45 gc5Base,24 d augustusGene,293 chainCalJac3,1060 chainCalJac3,1104 chainGorGor3,1057 chainGorGor3,1101 chainMm10,1057 chainMm10,1101 chainNetCalJac3,1063 chainNetCalJac3,1107 chainNetGorGor3,1060 chainNetGorGor3,1104 chainNetMm10,1060 chainNetMm10,1104 chainNetTarSyr2,1060 chainNetTarSyr2,1104 chainTarSyr2,1057 chainTarSyr2,1101 cpgIslandExt,438 cpgIslandExtUnmasked,441 cpgIslandSuper,438 ensGene,171 ensemblGeneScaffold,110 genscan,192 netCalJac3,1060 netCalJac3,1104 netGorGor3,1057 netGorGor3,1101 netMm10,1057 netMm10,1101 netTarSyr2,1057 netTarSyr2,1101 d23-6 mrna,513 d36-42 mrna,487 d501-4 xenoRefGene,391 d756-63 xenoRefGene,357 da mrna,465 mrna,493 dark xenoRefGene,75 darkly mrna,50 data cpgIslandExt,403 cpgIslandExt,493 cpgIslandExt,504 cpgIslandExt,525 cpgIslandExtUnmasked,406 cpgIslandExtUnmasked,496 cpgIslandExtUnmasked,507 cpgIslandExtUnmasked,528 cpgIslandSuper,403 cpgIslandSuper,493 cpgIslandSuper,504 cpgIslandSuper,525 ensGene,55 ensGene,59 ensGene,70 ensGene,102 gap,97 gc5Base,73 microsat,47 mrna,452 nestedRepeats,263 nestedRepeats,280 rmsk,126 rmsk,287 xenoRefGene,36 xenoRefGene,290 database chainCalJac3,984 chainGorGor3,981 chainMm10,981 chainNetCalJac3,987 chainNetGorGor3,984 chainNetMm10,984 chainNetTarSyr2,984 chainTarSyr2,981 ensGene,193 ensemblGeneScaffold,132 mrna,485 mrna,511 nestedRepeats,345 netCalJac3,984 netGorGor3,981 netMm10,981 netTarSyr2,981 quality,99 rmsk,125 rmsk,368 xenoRefGene,355 xenoRefGene,376 xenoRefGene,389 databases mrna,459 david chainCalJac3,978 chainGorGor3,975 chainMm10,975 chainNetCalJac3,981 chainNetGorGor3,978 chainNetMm10,978 chainNetTarSyr2,978 chainTarSyr2,975 netCalJac3,978 netGorGor3,975 netMm10,975 netTarSyr2,975 de augustusGene,303 deamination cpgIslandExt,110 cpgIslandExtUnmasked,113 cpgIslandSuper,110 dec chainMm10,4 chainMm10,66 chainMm10,306 chainNetMm10,5 chainNetMm10,69 chainNetMm10,309 chainNetMm10Viewchain,3 chainNetMm10Viewnet,3 nestedRepeats,389 nestedRepeats,411 netMm10,4 netMm10,66 netMm10,306 rmsk,412 rmsk,434 default chainCalJac3,321 chainGorGor3,318 chainMm10,318 chainNetCalJac3,324 chainNetGorGor3,321 chainNetMm10,321 chainNetTarSyr2,321 chainTarSyr2,318 cpgIslandExt,195 cpgIslandExtUnmasked,198 cpgIslandSuper,195 netCalJac3,321 netGorGor3,318 netMm10,318 netTarSyr2,318 xenoRefGene,103 xenoRefGene,196 definition gap,40 gold,42 deletion chainCalJac3,149 chainCalJac3,1065 chainGorGor3,147 chainGorGor3,1062 chainMm10,147 chainMm10,1062 chainNetCalJac3,152 chainNetCalJac3,1068 chainNetGorGor3,150 chainNetGorGor3,1065 chainNetMm10,150 chainNetMm10,1065 chainNetTarSyr2,150 chainNetTarSyr2,1065 chainTarSyr2,147 chainTarSyr2,1062 mrna,382 netCalJac3,149 netCalJac3,1065 netGorGor3,147 netGorGor3,1062 netMm10,147 netMm10,1062 netTarSyr2,147 netTarSyr2,1062 rmsk,220 deletions chainCalJac3,117 chainCalJac3,181 chainGorGor3,115 chainGorGor3,179 chainMm10,115 chainMm10,179 chainNetCalJac3,120 chainNetCalJac3,184 chainNetGorGor3,118 chainNetGorGor3,182 chainNetMm10,118 chainNetMm10,182 chainNetTarSyr2,118 chainNetTarSyr2,182 chainTarSyr2,115 chainTarSyr2,179 netCalJac3,117 netCalJac3,181 netGorGor3,115 netGorGor3,179 netMm10,115 netMm10,179 netTarSyr2,115 netTarSyr2,179 delivered gap,52 gold,51 dense gold,68 mrna,42 nestedRepeats,157 nestedRepeats,168 dependencies genscan,183 depicts gold,72 windowmaskerSdust,15 derived chainCalJac3,768 chainGorGor3,765 chainMm10,765 chainNetCalJac3,771 chainNetGorGor3,768 chainNetMm10,768 chainNetTarSyr2,768 chainTarSyr2,765 netCalJac3,768 netGorGor3,765 netMm10,765 netTarSyr2,765 described chainCalJac3,775 chainGorGor3,772 chainMm10,772 chainNetCalJac3,778 chainNetGorGor3,775 chainNetMm10,775 chainNetTarSyr2,775 chainTarSyr2,772 genscan,161 nestedRepeats,60 nestedRepeats,338 netCalJac3,775 netGorGor3,772 netMm10,772 netTarSyr2,772 rmsk,96 rmsk,361 describes augustusGene,226 gap,61 gold,60 description augustusGene,12 chainCalJac3,13 chainCalJac3,780 chainGorGor3,12 chainGorGor3,777 chainMm10,12 chainMm10,777 chainNetCalJac3,16 chainNetCalJac3,783 chainNetGorGor3,15 chainNetGorGor3,780 chainNetMm10,15 chainNetMm10,780 chainNetTarSyr2,15 chainNetTarSyr2,780 chainTarSyr2,12 chainTarSyr2,777 cpgIslandExt,14 cpgIslandExtUnmasked,17 cpgIslandSuper,14 ensGene,9 ensGene,32 ensemblGeneScaffold,10 ensemblGeneScaffold,78 gap,7 gc5Base,11 genscan,10 genscan,77 genscan,133 gold,8 microsat,10 mrna,12 mrna,58 nestedRepeats,14 netCalJac3,13 netCalJac3,780 netGorGor3,12 netGorGor3,777 netMm10,12 netMm10,777 netTarSyr2,12 netTarSyr2,777 quality,11 rmsk,9 simpleRepeat,11 windowmaskerSdust,12 xenoRefGene,11 xenoRefGene,99 descriptions augustusGene,91 desired mrna,234 detail genscan,164 detailed augustusGene,90 chainCalJac3,464 chainCalJac3,483 chainGorGor3,461 chainGorGor3,480 chainMm10,461 chainMm10,480 chainNetCalJac3,467 chainNetCalJac3,486 chainNetGorGor3,464 chainNetGorGor3,483 chainNetMm10,464 chainNetMm10,483 chainNetTarSyr2,464 chainNetTarSyr2,483 chainTarSyr2,461 chainTarSyr2,480 nestedRepeats,70 netCalJac3,464 netCalJac3,483 netGorGor3,461 netGorGor3,480 netMm10,461 netMm10,480 netTarSyr2,461 netTarSyr2,480 rmsk,37 details rmsk,119 determined windowmaskerSdust,19 determining chainCalJac3,488 chainGorGor3,485 chainMm10,485 chainNetCalJac3,491 chainNetGorGor3,488 chainNetMm10,488 chainNetTarSyr2,488 chainTarSyr2,485 netCalJac3,488 netGorGor3,485 netMm10,485 netTarSyr2,485 dev cpgIslandExt,419 cpgIslandExtUnmasked,422 cpgIslandSuper,419 nestedRepeats,387 nestedRepeats,409 rmsk,410 rmsk,432 developed chainCalJac3,925 chainCalJac3,960 chainCalJac3,1006 chainGorGor3,922 chainGorGor3,957 chainGorGor3,1003 chainMm10,922 chainMm10,957 chainMm10,1003 chainNetCalJac3,928 chainNetCalJac3,963 chainNetCalJac3,1009 chainNetGorGor3,925 chainNetGorGor3,960 chainNetGorGor3,1006 chainNetMm10,925 chainNetMm10,960 chainNetMm10,1006 chainNetTarSyr2,925 chainNetTarSyr2,960 chainNetTarSyr2,1006 chainTarSyr2,922 chainTarSyr2,957 chainTarSyr2,1003 cpgIslandExt,595 cpgIslandExtUnmasked,598 cpgIslandSuper,595 netCalJac3,925 netCalJac3,960 netCalJac3,1006 netGorGor3,922 netGorGor3,957 netGorGor3,1003 netMm10,922 netMm10,957 netMm10,1003 netTarSyr2,922 netTarSyr2,957 netTarSyr2,1003 dfam rmsk,112 di-nucleotide microsat,3 microsat,32 diekhans augustusGene,288 different augustusGene,39 augustusGene,85 augustusGene,96 augustusGene,144 augustusGene,155 augustusGene,179 augustusGene,193 chainCalJac3,563 chainGorGor3,560 chainMm10,560 chainNetCalJac3,566 chainNetGorGor3,563 chainNetMm10,563 chainNetTarSyr2,563 chainTarSyr2,560 ensGene,22 gc5Base,50 genscan,54 netCalJac3,563 netGorGor3,560 netMm10,560 netTarSyr2,560 quality,66 rmsk,149 dinucleotide cpgIslandExt,240 cpgIslandExtUnmasked,243 cpgIslandSuper,240 dinucleotides cpgIslandExt,282 cpgIslandExt,340 cpgIslandExtUnmasked,285 cpgIslandExtUnmasked,343 cpgIslandSuper,282 cpgIslandSuper,340 directly cpgIslandExt,534 cpgIslandExtUnmasked,537 cpgIslandSuper,534 ensGene,111 directory ensGene,86 ensGene,94 rmsk,134 discarded chainCalJac3,694 chainGorGor3,691 chainMm10,691 chainNetCalJac3,697 chainNetGorGor3,694 chainNetMm10,694 chainNetTarSyr2,694 chainTarSyr2,691 netCalJac3,694 netGorGor3,691 netMm10,691 netTarSyr2,691 xenoRefGene,238 discussion nestedRepeats,364 rmsk,387 diseases simpleRepeat,54 display chainCalJac3,243 chainCalJac3,314 chainCalJac3,359 chainCalJac3,389 chainCalJac3,448 chainCalJac3,477 chainCalJac3,506 chainCalJac3,982 chainGorGor3,241 chainGorGor3,311 chainGorGor3,356 chainGorGor3,386 chainGorGor3,445 chainGorGor3,474 chainGorGor3,503 chainGorGor3,979 chainMm10,241 chainMm10,311 chainMm10,356 chainMm10,386 chainMm10,445 chainMm10,474 chainMm10,503 chainMm10,979 chainNetCalJac3,246 chainNetCalJac3,317 chainNetCalJac3,362 chainNetCalJac3,392 chainNetCalJac3,451 chainNetCalJac3,480 chainNetCalJac3,509 chainNetCalJac3,985 chainNetGorGor3,244 chainNetGorGor3,314 chainNetGorGor3,359 chainNetGorGor3,389 chainNetGorGor3,448 chainNetGorGor3,477 chainNetGorGor3,506 chainNetGorGor3,982 chainNetMm10,244 chainNetMm10,314 chainNetMm10,359 chainNetMm10,389 chainNetMm10,448 chainNetMm10,477 chainNetMm10,506 chainNetMm10,982 chainNetTarSyr2,244 chainNetTarSyr2,314 chainNetTarSyr2,359 chainNetTarSyr2,389 chainNetTarSyr2,448 chainNetTarSyr2,477 chainNetTarSyr2,506 chainNetTarSyr2,982 chainTarSyr2,241 chainTarSyr2,311 chainTarSyr2,356 chainTarSyr2,386 chainTarSyr2,445 chainTarSyr2,474 chainTarSyr2,503 chainTarSyr2,979 genscan,61 genscan,69 genscan,104 gold,131 mrna,27 mrna,35 mrna,43 mrna,73 mrna,100 mrna,130 mrna,275 mrna,299 mrna,315 mrna,331 mrna,383 nestedRepeats,111 netCalJac3,243 netCalJac3,314 netCalJac3,359 netCalJac3,389 netCalJac3,448 netCalJac3,477 netCalJac3,506 netCalJac3,982 netGorGor3,241 netGorGor3,311 netGorGor3,356 netGorGor3,386 netGorGor3,445 netGorGor3,474 netGorGor3,503 netGorGor3,979 netMm10,241 netMm10,311 netMm10,356 netMm10,386 netMm10,445 netMm10,474 netMm10,503 netMm10,979 netTarSyr2,241 netTarSyr2,311 netTarSyr2,356 netTarSyr2,386 netTarSyr2,445 netTarSyr2,474 netTarSyr2,503 netTarSyr2,979 quality,103 rmsk,135 rmsk,141 rmsk,212 xenoRefGene,43 xenoRefGene,51 xenoRefGene,80 xenoRefGene,116 xenoRefGene,159 displayed chainCalJac3,425 chainCalJac3,522 chainCalJac3,699 chainGorGor3,422 chainGorGor3,519 chainGorGor3,696 chainMm10,422 chainMm10,519 chainMm10,696 chainNetCalJac3,428 chainNetCalJac3,525 chainNetCalJac3,702 chainNetGorGor3,425 chainNetGorGor3,522 chainNetGorGor3,699 chainNetMm10,425 chainNetMm10,522 chainNetMm10,699 chainNetTarSyr2,425 chainNetTarSyr2,522 chainNetTarSyr2,699 chainTarSyr2,422 chainTarSyr2,519 chainTarSyr2,696 cpgIslandExt,204 cpgIslandExtUnmasked,207 cpgIslandSuper,204 ensemblGeneScaffold,30 gc5Base,54 nestedRepeats,124 nestedRepeats,217 netCalJac3,425 netCalJac3,522 netCalJac3,699 netGorGor3,422 netGorGor3,519 netGorGor3,696 netMm10,422 netMm10,519 netMm10,696 netTarSyr2,422 netTarSyr2,519 netTarSyr2,696 quality,70 xenoRefGene,204 displays chainCalJac3,124 chainGorGor3,122 chainMm10,122 chainNetCalJac3,127 chainNetGorGor3,125 chainNetMm10,125 chainNetTarSyr2,125 chainTarSyr2,122 cpgIslandExt,174 cpgIslandExtUnmasked,177 cpgIslandSuper,174 microsat,13 netCalJac3,124 netGorGor3,122 netMm10,122 netTarSyr2,122 rmsk,145 simpleRepeat,14 dissertation augustusGene,105 distinguish cpgIslandExt,75 cpgIslandExtUnmasked,78 cpgIslandSuper,75 distinguished gold,85 distributions augustusGene,83 genscan,42 diverged chainCalJac3,917 chainGorGor3,914 chainMm10,914 chainNetCalJac3,920 chainNetGorGor3,917 chainNetMm10,917 chainNetTarSyr2,917 chainTarSyr2,914 nestedRepeats,212 netCalJac3,917 netGorGor3,914 netMm10,914 netTarSyr2,914 dj mrna,473 mrna,497 dl mrna,501 dna chainCalJac3,1026 chainGorGor3,1023 chainMm10,1023 chainNetCalJac3,1029 chainNetGorGor3,1026 chainNetMm10,1026 chainNetTarSyr2,1026 chainTarSyr2,1023 cpgIslandExt,60 cpgIslandExt,79 cpgIslandExt,92 cpgIslandExtUnmasked,63 cpgIslandExtUnmasked,82 cpgIslandExtUnmasked,95 cpgIslandSuper,60 cpgIslandSuper,79 cpgIslandSuper,92 genscan,219 microsat,123 nestedRepeats,33 nestedRepeats,41 netCalJac3,1026 netGorGor3,1023 netMm10,1023 netTarSyr2,1023 rmsk,23 rmsk,31 rmsk,174 rmsk,177 rmsk,257 simpleRepeat,83 do cpgIslandExt,140 cpgIslandExtUnmasked,143 cpgIslandSuper,140 ensemblGeneScaffold,44 doc rmsk,132 document gap,58 gold,57 documentation gap,30 gold,32 dollar cpgIslandExt,425 cpgIslandExt,427 cpgIslandExt,431 cpgIslandExt,433 cpgIslandExt,457 cpgIslandExt,459 cpgIslandExt,461 cpgIslandExt,463 cpgIslandExt,465 cpgIslandExt,468 cpgIslandExt,471 cpgIslandExt,476 cpgIslandExt,479 cpgIslandExt,481 cpgIslandExtUnmasked,428 cpgIslandExtUnmasked,430 cpgIslandExtUnmasked,434 cpgIslandExtUnmasked,436 cpgIslandExtUnmasked,460 cpgIslandExtUnmasked,462 cpgIslandExtUnmasked,464 cpgIslandExtUnmasked,466 cpgIslandExtUnmasked,468 cpgIslandExtUnmasked,471 cpgIslandExtUnmasked,474 cpgIslandExtUnmasked,479 cpgIslandExtUnmasked,482 cpgIslandExtUnmasked,484 cpgIslandSuper,425 cpgIslandSuper,427 cpgIslandSuper,431 cpgIslandSuper,433 cpgIslandSuper,457 cpgIslandSuper,459 cpgIslandSuper,461 cpgIslandSuper,463 cpgIslandSuper,465 cpgIslandSuper,468 cpgIslandSuper,471 cpgIslandSuper,476 cpgIslandSuper,479 cpgIslandSuper,481 done augustusGene,265 augustusGene,281 donor genscan,31 double chainCalJac3,132 chainCalJac3,162 chainGorGor3,130 chainGorGor3,160 chainMm10,130 chainMm10,160 chainNetCalJac3,135 chainNetCalJac3,165 chainNetGorGor3,133 chainNetGorGor3,163 chainNetMm10,133 chainNetMm10,163 chainNetTarSyr2,133 chainNetTarSyr2,163 chainTarSyr2,130 chainTarSyr2,160 netCalJac3,132 netCalJac3,162 netGorGor3,130 netGorGor3,160 netMm10,130 netMm10,160 netTarSyr2,130 netTarSyr2,160 double-lined chainCalJac3,223 chainGorGor3,221 chainMm10,221 chainNetCalJac3,226 chainNetGorGor3,224 chainNetMm10,224 chainNetTarSyr2,224 chainTarSyr2,221 netCalJac3,223 netGorGor3,221 netMm10,221 netTarSyr2,221 double-sided chainCalJac3,106 chainGorGor3,104 chainMm10,104 chainNetCalJac3,109 chainNetGorGor3,107 chainNetMm10,107 chainNetTarSyr2,107 chainTarSyr2,104 netCalJac3,106 netGorGor3,104 netMm10,104 netTarSyr2,104 down ensGene,186 ensemblGeneScaffold,125 download ensGene,93 ensGene,143 downloads ensGene,74 ensGene,85 rmsk,76 dr xenoRefGene,367 drawn gap,108 gold,127 drosophila augustusGene,213 due chainCalJac3,146 chainCalJac3,216 chainCalJac3,228 chainGorGor3,144 chainGorGor3,214 chainGorGor3,226 chainMm10,144 chainMm10,214 chainMm10,226 chainNetCalJac3,149 chainNetCalJac3,219 chainNetCalJac3,231 chainNetGorGor3,147 chainNetGorGor3,217 chainNetGorGor3,229 chainNetMm10,147 chainNetMm10,217 chainNetMm10,229 chainNetTarSyr2,147 chainNetTarSyr2,217 chainNetTarSyr2,229 chainTarSyr2,144 chainTarSyr2,214 chainTarSyr2,226 netCalJac3,146 netCalJac3,216 netCalJac3,228 netGorGor3,144 netGorGor3,214 netGorGor3,226 netMm10,144 netMm10,214 netMm10,226 netTarSyr2,144 netTarSyr2,214 netTarSyr2,226 duplication chainCalJac3,1064 chainGorGor3,1061 chainMm10,1061 chainNetCalJac3,1067 chainNetGorGor3,1064 chainNetMm10,1064 chainNetTarSyr2,1064 chainTarSyr2,1061 cpgIslandExt,95 cpgIslandExtUnmasked,98 cpgIslandSuper,95 netCalJac3,1064 netGorGor3,1061 netMm10,1061 netTarSyr2,1061 during chainCalJac3,822 chainGorGor3,819 chainMm10,819 chainNetCalJac3,825 chainNetGorGor3,822 chainNetMm10,822 chainNetTarSyr2,822 chainTarSyr2,819 netCalJac3,822 netGorGor3,819 netMm10,819 netTarSyr2,819 dynamic chainCalJac3,655 chainGorGor3,652 chainMm10,652 chainNetCalJac3,658 chainNetGorGor3,655 chainNetMm10,655 chainNetTarSyr2,655 chainTarSyr2,652 netCalJac3,655 netGorGor3,652 netMm10,652 netTarSyr2,652 e ensGene,173 ensemblGeneScaffold,112 e.g chainCalJac3,376 chainGorGor3,373 chainMm10,373 chainNetCalJac3,379 chainNetGorGor3,376 chainNetMm10,376 chainNetTarSyr2,376 chainTarSyr2,373 netCalJac3,376 netGorGor3,373 netMm10,373 netTarSyr2,373 each chainCalJac3,261 chainGorGor3,259 chainMm10,259 chainNetCalJac3,264 chainNetGorGor3,262 chainNetMm10,262 chainNetTarSyr2,262 chainTarSyr2,259 cpgIslandExt,239 cpgIslandExt,253 cpgIslandExtUnmasked,242 cpgIslandExtUnmasked,256 cpgIslandSuper,239 cpgIslandSuper,253 genscan,99 mrna,163 nestedRepeats,120 netCalJac3,261 netGorGor3,259 netMm10,259 netTarSyr2,259 quality,22 quality,30 editors genscan,195 either chainCalJac3,129 chainGorGor3,127 chainMm10,127 chainNetCalJac3,132 chainNetGorGor3,130 chainNetMm10,130 chainNetTarSyr2,130 chainTarSyr2,127 gap,87 netCalJac3,129 netGorGor3,127 netMm10,127 netTarSyr2,127 rmsk,273 electronic nestedRepeats,348 rmsk,371 element rmsk,228 elements nestedRepeats,352 nestedRepeats,380 rmsk,3 rmsk,156 rmsk,164 rmsk,169 rmsk,176 rmsk,375 rmsk,403 elsevier genscan,202 em windowmaskerSdust,93 emerged chainCalJac3,828 chainGorGor3,825 chainMm10,825 chainNetCalJac3,831 chainNetGorGor3,828 chainNetMm10,828 chainNetTarSyr2,828 chainTarSyr2,825 netCalJac3,828 netGorGor3,825 netMm10,825 netTarSyr2,825 end rmsk,245 ensembl ensGene,1 ensGene,3 ensGene,16 ensGene,38 ensGene,57 ensGene,151 ensGene,162 ensGene,191 ensemblGeneScaffold,1 ensemblGeneScaffold,3 ensemblGeneScaffold,17 ensemblGeneScaffold,62 ensemblGeneScaffold,70 ensemblGeneScaffold,84 ensemblGeneScaffold,101 ensemblGeneScaffold,130 ensgene.txt.gz ensGene,88 enter chainCalJac3,370 chainGorGor3,367 chainMm10,367 chainNetCalJac3,373 chainNetGorGor3,370 chainNetMm10,370 chainNetTarSyr2,370 chainTarSyr2,367 netCalJac3,370 netGorGor3,367 netMm10,367 netTarSyr2,367 entered mrna,200 mrna,210 entire cpgIslandExt,301 cpgIslandExtUnmasked,304 cpgIslandSuper,301 windowmaskerSdust,37 ermolaeva xenoRefGene,330 especially mrna,101 est mrna,11 et cpgIslandExt,377 cpgIslandExtUnmasked,380 cpgIslandSuper,377 ensGene,45 ensGene,188 ensemblGeneScaffold,90 ensemblGeneScaffold,127 xenoRefGene,340 evaluated cpgIslandExt,257 cpgIslandExtUnmasked,260 cpgIslandSuper,257 every chainCalJac3,277 chainGorGor3,275 chainMm10,275 chainNetCalJac3,280 chainNetGorGor3,278 chainNetMm10,278 chainNetTarSyr2,278 chainTarSyr2,275 netCalJac3,277 netGorGor3,275 netMm10,275 netTarSyr2,275 evolution chainCalJac3,1061 chainGorGor3,1058 chainMm10,1058 chainNetCalJac3,1064 chainNetGorGor3,1061 chainNetMm10,1061 chainNetTarSyr2,1061 chainTarSyr2,1058 netCalJac3,1061 netGorGor3,1058 netMm10,1058 netTarSyr2,1058 evolutionary cpgIslandExt,98 cpgIslandExtUnmasked,101 cpgIslandSuper,98 ew mrna,477 example mrna,132 mrna,185 rmsk,256 exclude mrna,80 mrna,285 mrna,291 exe cpgIslandExt,578 cpgIslandExtUnmasked,581 cpgIslandSuper,578 exist chainCalJac3,409 chainGorGor3,406 chainMm10,406 chainNetCalJac3,412 chainNetGorGor3,409 chainNetMm10,409 chainNetTarSyr2,409 chainTarSyr2,406 cpgIslandExt,179 cpgIslandExtUnmasked,182 cpgIslandSuper,179 gold,97 netCalJac3,409 netGorGor3,406 netMm10,406 netTarSyr2,406 exon augustusGene,86 exons chainCalJac3,49 chainGorGor3,48 chainMm10,48 chainNetCalJac3,52 chainNetGorGor3,51 chainNetMm10,51 chainNetTarSyr2,51 chainTarSyr2,48 genscan,44 netCalJac3,49 netGorGor3,48 netMm10,48 netTarSyr2,48 exp cpgIslandExt,381 cpgIslandExtUnmasked,384 cpgIslandSuper,381 expansions simpleRepeat,48 expected cpgIslandExt,285 cpgIslandExt,366 cpgIslandExtUnmasked,288 cpgIslandExtUnmasked,369 cpgIslandSuper,285 cpgIslandSuper,366 explanation gc5Base,66 quality,80 explored cpgIslandExt,514 cpgIslandExtUnmasked,517 cpgIslandSuper,514 ensGene,62 expressed mrna,140 expression cpgIslandExt,11 cpgIslandExt,146 cpgIslandExtUnmasked,14 cpgIslandExtUnmasked,149 cpgIslandSuper,11 cpgIslandSuper,146 extend rmsk,308 extracted nestedRepeats,23 f chainCalJac3,1034 chainGorGor3,1031 chainMm10,1031 chainNetCalJac3,1037 chainNetGorGor3,1034 chainNetMm10,1034 chainNetTarSyr2,1034 chainTarSyr2,1031 netCalJac3,1034 netGorGor3,1031 netMm10,1031 netTarSyr2,1031 xenoRefGene,327 facilitate genscan,106 factor mrna,177 family rmsk,249 faq augustusGene,45 ensGene,28 genscan,60 nestedRepeats,298 rmsk,321 farrell xenoRefGene,332 feature chainCalJac3,247 chainGorGor3,245 chainMm10,245 chainNetCalJac3,250 chainNetGorGor3,248 chainNetMm10,248 chainNetTarSyr2,248 chainTarSyr2,245 genscan,129 mrna,335 netCalJac3,247 netGorGor3,245 netMm10,245 netTarSyr2,245 xenoRefGene,147 xenoRefGene,180 features xenoRefGene,83 fed chainCalJac3,620 chainGorGor3,617 chainMm10,617 chainNetCalJac3,623 chainNetGorGor3,620 chainNetMm10,620 chainNetTarSyr2,620 chainTarSyr2,617 netCalJac3,620 netGorGor3,617 netMm10,617 netTarSyr2,617 ffer windowmaskerSdust,96 field augustusGene,120 file cpgIslandExt,583 cpgIslandExtUnmasked,586 cpgIslandSuper,583 gap,51 gap,67 gold,50 gold,66 windowmaskerSdust,77 files ensGene,78 fill chainCalJac3,852 chainCalJac3,885 chainGorGor3,849 chainGorGor3,882 chainMm10,849 chainMm10,882 chainNetCalJac3,855 chainNetCalJac3,888 chainNetGorGor3,852 chainNetGorGor3,885 chainNetMm10,852 chainNetMm10,885 chainNetTarSyr2,852 chainNetTarSyr2,885 chainTarSyr2,849 chainTarSyr2,882 netCalJac3,852 netCalJac3,885 netGorGor3,849 netGorGor3,882 netMm10,849 netMm10,882 netTarSyr2,849 netTarSyr2,882 filled chainCalJac3,418 chainCalJac3,437 chainCalJac3,834 chainCalJac3,907 chainGorGor3,415 chainGorGor3,434 chainGorGor3,831 chainGorGor3,904 chainMm10,415 chainMm10,434 chainMm10,831 chainMm10,904 chainNetCalJac3,421 chainNetCalJac3,440 chainNetCalJac3,837 chainNetCalJac3,910 chainNetGorGor3,418 chainNetGorGor3,437 chainNetGorGor3,834 chainNetGorGor3,907 chainNetMm10,418 chainNetMm10,437 chainNetMm10,834 chainNetMm10,907 chainNetTarSyr2,418 chainNetTarSyr2,437 chainNetTarSyr2,834 chainNetTarSyr2,907 chainTarSyr2,415 chainTarSyr2,434 chainTarSyr2,831 chainTarSyr2,904 netCalJac3,418 netCalJac3,437 netCalJac3,834 netCalJac3,907 netGorGor3,415 netGorGor3,434 netGorGor3,831 netGorGor3,904 netMm10,415 netMm10,434 netMm10,831 netMm10,904 netTarSyr2,415 netTarSyr2,434 netTarSyr2,831 netTarSyr2,904 filter chainCalJac3,382 chainGorGor3,379 chainMm10,379 chainNetCalJac3,385 chainNetGorGor3,382 chainNetMm10,382 chainNetTarSyr2,382 chainTarSyr2,379 genscan,82 mrna,65 mrna,114 mrna,127 mrna,136 mrna,183 mrna,224 mrna,248 mrna,266 mrna,304 mrna,322 netCalJac3,382 netGorGor3,379 netMm10,379 netTarSyr2,379 filtered mrna,287 filtering mrna,226 final cpgIslandExt,89 cpgIslandExtUnmasked,92 cpgIslandSuper,89 find chainCalJac3,664 chainGorGor3,661 chainMm10,661 chainNetCalJac3,667 chainNetGorGor3,664 chainNetMm10,664 chainNetTarSyr2,664 chainTarSyr2,661 netCalJac3,664 netGorGor3,661 netMm10,661 netTarSyr2,661 rmsk,117 finder microsat,94 microsat,107 microsat,118 simpleRepeat,25 simpleRepeat,78 finding augustusGene,306 chainCalJac3,288 chainGorGor3,286 chainMm10,286 chainNetCalJac3,291 chainNetGorGor3,289 chainNetMm10,289 chainNetTarSyr2,289 chainTarSyr2,286 netCalJac3,288 netGorGor3,286 netMm10,286 netTarSyr2,286 first chainCalJac3,792 chainGorGor3,789 chainMm10,789 chainNetCalJac3,795 chainNetGorGor3,792 chainNetMm10,792 chainNetTarSyr2,792 chainTarSyr2,789 netCalJac3,792 netGorGor3,789 netMm10,789 netTarSyr2,789 fish augustusGene,201 fit chainCalJac3,812 chainGorGor3,809 chainMm10,809 chainNetCalJac3,815 chainNetGorGor3,812 chainNetMm10,812 chainNetTarSyr2,812 chainTarSyr2,809 nestedRepeats,175 netCalJac3,812 netGorGor3,809 netMm10,809 netTarSyr2,809 flag nestedRepeats,287 rmsk,294 flags nestedRepeats,289 rmsk,296 fly augustusGene,214 followed cpgIslandExt,47 cpgIslandExtUnmasked,50 cpgIslandSuper,47 following chainCalJac3,673 chainGorGor3,670 chainMm10,670 chainNetCalJac3,676 chainNetGorGor3,673 chainNetMm10,673 chainNetTarSyr2,673 chainTarSyr2,670 cpgIslandExt,260 cpgIslandExt,408 cpgIslandExtUnmasked,263 cpgIslandExtUnmasked,411 cpgIslandSuper,260 cpgIslandSuper,408 gap,120 genscan,81 netCalJac3,673 netGorGor3,670 netMm10,670 netTarSyr2,670 windowmaskerSdust,56 follows genscan,67 mrna,33 xenoRefGene,49 for augustusGene,34 augustusGene,52 augustusGene,68 augustusGene,80 augustusGene,175 augustusGene,184 augustusGene,192 augustusGene,232 augustusGene,253 augustusGene,260 augustusGene,274 chainCalJac3,260 chainCalJac3,276 chainCalJac3,287 chainCalJac3,294 chainCalJac3,495 chainGorGor3,258 chainGorGor3,274 chainGorGor3,285 chainGorGor3,292 chainGorGor3,492 chainMm10,258 chainMm10,274 chainMm10,285 chainMm10,292 chainMm10,492 chainNetCalJac3,263 chainNetCalJac3,279 chainNetCalJac3,290 chainNetCalJac3,297 chainNetCalJac3,498 chainNetGorGor3,261 chainNetGorGor3,277 chainNetGorGor3,288 chainNetGorGor3,295 chainNetGorGor3,495 chainNetMm10,261 chainNetMm10,277 chainNetMm10,288 chainNetMm10,295 chainNetMm10,495 chainNetTarSyr2,261 chainNetTarSyr2,277 chainNetTarSyr2,288 chainNetTarSyr2,295 chainNetTarSyr2,495 chainTarSyr2,258 chainTarSyr2,274 chainTarSyr2,285 chainTarSyr2,292 chainTarSyr2,492 cpgIslandExt,133 cpgIslandExt,162 cpgIslandExt,242 cpgIslandExt,246 cpgIslandExt,258 cpgIslandExt,309 cpgIslandExt,500 cpgIslandExt,556 cpgIslandExtUnmasked,136 cpgIslandExtUnmasked,165 cpgIslandExtUnmasked,245 cpgIslandExtUnmasked,249 cpgIslandExtUnmasked,261 cpgIslandExtUnmasked,312 cpgIslandExtUnmasked,503 cpgIslandExtUnmasked,559 cpgIslandSuper,133 cpgIslandSuper,162 cpgIslandSuper,242 cpgIslandSuper,246 cpgIslandSuper,258 cpgIslandSuper,309 cpgIslandSuper,500 cpgIslandSuper,556 cytoBandIdeo,5 ensGene,17 ensGene,30 ensGene,72 ensGene,79 ensGene,98 ensGene,152 ensGene,157 ensemblGeneScaffold,76 ensemblGeneScaffold,102 gc5Base,64 genscan,49 genscan,71 genscan,124 genscan,131 genscan,174 microsat,95 mrna,37 mrna,60 mrna,131 mrna,162 mrna,184 mrna,348 mrna,361 mrna,374 nestedRepeats,35 nestedRepeats,239 nestedRepeats,293 nestedRepeats,299 nestedRepeats,311 nestedRepeats,362 netCalJac3,260 netCalJac3,276 netCalJac3,287 netCalJac3,294 netCalJac3,495 netGorGor3,258 netGorGor3,274 netGorGor3,285 netGorGor3,292 netGorGor3,492 netMm10,258 netMm10,274 netMm10,285 netMm10,292 netMm10,492 netTarSyr2,258 netTarSyr2,274 netTarSyr2,285 netTarSyr2,292 netTarSyr2,492 quality,78 rmsk,25 rmsk,120 rmsk,255 rmsk,300 rmsk,322 rmsk,334 rmsk,385 simpleRepeat,30 simpleRepeat,56 windowmaskerSdust,35 windowmaskerSdust,86 windowmaskerSdust,103 xenoRefGene,20 xenoRefGene,53 xenoRefGene,175 format chainCalJac3,611 chainGorGor3,608 chainMm10,608 chainNetCalJac3,614 chainNetGorGor3,611 chainNetMm10,611 chainNetTarSyr2,611 chainTarSyr2,608 ensGene,77 ensGene,97 gap,63 gold,62 netCalJac3,611 netGorGor3,608 netMm10,608 netTarSyr2,608 formula cpgIslandExt,373 cpgIslandExtUnmasked,376 cpgIslandSuper,373 forth chainCalJac3,444 chainGorGor3,441 chainMm10,441 chainNetCalJac3,447 chainNetGorGor3,444 chainNetMm10,444 chainNetTarSyr2,444 chainTarSyr2,441 netCalJac3,444 netGorGor3,441 netMm10,441 netTarSyr2,441 found augustusGene,100 ensGene,139 gold,138 mrna,416 four chainCalJac3,512 chainGorGor3,509 chainMm10,509 chainNetCalJac3,515 chainNetGorGor3,512 chainNetMm10,512 chainNetTarSyr2,512 chainTarSyr2,509 netCalJac3,512 netGorGor3,509 netMm10,509 netTarSyr2,509 fragment gap,125 fragments gold,4 nestedRepeats,3 nestedRepeats,19 nestedRepeats,82 nestedRepeats,101 nestedRepeats,127 nestedRepeats,139 nestedRepeats,191 nestedRepeats,205 nestedRepeats,208 from augustusGene,19 chainCalJac3,178 chainCalJac3,306 chainCalJac3,564 chainCalJac3,587 chainCalJac3,769 chainCalJac3,942 chainCalJac3,974 chainGorGor3,176 chainGorGor3,304 chainGorGor3,561 chainGorGor3,584 chainGorGor3,766 chainGorGor3,939 chainGorGor3,971 chainMm10,176 chainMm10,304 chainMm10,561 chainMm10,584 chainMm10,766 chainMm10,939 chainMm10,971 chainNetCalJac3,181 chainNetCalJac3,309 chainNetCalJac3,567 chainNetCalJac3,590 chainNetCalJac3,772 chainNetCalJac3,945 chainNetCalJac3,977 chainNetGorGor3,179 chainNetGorGor3,307 chainNetGorGor3,564 chainNetGorGor3,587 chainNetGorGor3,769 chainNetGorGor3,942 chainNetGorGor3,974 chainNetMm10,179 chainNetMm10,307 chainNetMm10,564 chainNetMm10,587 chainNetMm10,769 chainNetMm10,942 chainNetMm10,974 chainNetTarSyr2,179 chainNetTarSyr2,307 chainNetTarSyr2,564 chainNetTarSyr2,587 chainNetTarSyr2,769 chainNetTarSyr2,942 chainNetTarSyr2,974 chainTarSyr2,176 chainTarSyr2,304 chainTarSyr2,561 chainTarSyr2,584 chainTarSyr2,766 chainTarSyr2,939 chainTarSyr2,971 cpgIslandExt,81 cpgIslandExt,496 cpgIslandExt,535 cpgIslandExt,563 cpgIslandExt,574 cpgIslandExtUnmasked,84 cpgIslandExtUnmasked,499 cpgIslandExtUnmasked,538 cpgIslandExtUnmasked,566 cpgIslandExtUnmasked,577 cpgIslandSuper,81 cpgIslandSuper,496 cpgIslandSuper,535 cpgIslandSuper,563 cpgIslandSuper,574 ensGene,106 ensGene,112 ensemblGeneScaffold,68 gap,48 genscan,15 gold,3 gold,47 mrna,7 mrna,449 nestedRepeats,24 nestedRepeats,50 nestedRepeats,72 netCalJac3,178 netCalJac3,306 netCalJac3,564 netCalJac3,587 netCalJac3,769 netCalJac3,942 netCalJac3,974 netGorGor3,176 netGorGor3,304 netGorGor3,561 netGorGor3,584 netGorGor3,766 netGorGor3,939 netGorGor3,971 netMm10,176 netMm10,304 netMm10,561 netMm10,584 netMm10,766 netMm10,939 netMm10,971 netTarSyr2,176 netTarSyr2,304 netTarSyr2,561 netTarSyr2,584 netTarSyr2,766 netTarSyr2,939 netTarSyr2,971 rmsk,86 windowmaskerSdust,41 xenoRefGene,27 xenoRefGene,167 xenoRefGene,287 frommer cpgIslandExt,606 cpgIslandExtUnmasked,609 cpgIslandSuper,606 ftp windowmaskerSdust,44 full chainCalJac3,241 chainCalJac3,388 chainGorGor3,239 chainGorGor3,385 chainMm10,239 chainMm10,385 chainNetCalJac3,244 chainNetCalJac3,391 chainNetGorGor3,242 chainNetGorGor3,388 chainNetMm10,242 chainNetMm10,388 chainNetTarSyr2,242 chainNetTarSyr2,388 chainTarSyr2,239 chainTarSyr2,385 nestedRepeats,118 netCalJac3,241 netCalJac3,388 netGorGor3,239 netGorGor3,385 netMm10,239 netMm10,385 netTarSyr2,239 netTarSyr2,385 rmsk,140 furthermore augustusGene,64 future rmsk,272 g cpgIslandExt,51 cpgIslandExt,392 cpgIslandExt,597 cpgIslandExtUnmasked,54 cpgIslandExtUnmasked,395 cpgIslandExtUnmasked,600 cpgIslandSuper,51 cpgIslandSuper,392 cpgIslandSuper,597 ensGene,175 ensemblGeneScaffold,114 gc5Base,20 microsat,115 simpleRepeat,75 g-236-318100-330 chainGorGor3,678 chainNetGorGor3,681 netGorGor3,678 g-29-19497-170 chainNetTarSyr2,681 chainTarSyr2,678 netTarSyr2,678 g-31-125100-114 chainCalJac3,681 chainMm10,678 chainNetCalJac3,684 chainNetMm10,681 netCalJac3,681 netMm10,678 gambiae augustusGene,219 gap chainCalJac3,79 chainCalJac3,89 chainCalJac3,190 chainCalJac3,481 chainCalJac3,493 chainCalJac3,516 chainCalJac3,534 chainCalJac3,549 chainCalJac3,566 chainCalJac3,705 chainCalJac3,836 chainGorGor3,77 chainGorGor3,87 chainGorGor3,188 chainGorGor3,478 chainGorGor3,490 chainGorGor3,513 chainGorGor3,531 chainGorGor3,546 chainGorGor3,563 chainGorGor3,702 chainGorGor3,833 chainMm10,77 chainMm10,87 chainMm10,188 chainMm10,478 chainMm10,490 chainMm10,513 chainMm10,531 chainMm10,546 chainMm10,563 chainMm10,702 chainMm10,833 chainNetCalJac3,82 chainNetCalJac3,92 chainNetCalJac3,193 chainNetCalJac3,484 chainNetCalJac3,496 chainNetCalJac3,519 chainNetCalJac3,537 chainNetCalJac3,552 chainNetCalJac3,569 chainNetCalJac3,708 chainNetCalJac3,839 chainNetGorGor3,80 chainNetGorGor3,90 chainNetGorGor3,191 chainNetGorGor3,481 chainNetGorGor3,493 chainNetGorGor3,516 chainNetGorGor3,534 chainNetGorGor3,549 chainNetGorGor3,566 chainNetGorGor3,705 chainNetGorGor3,836 chainNetMm10,80 chainNetMm10,90 chainNetMm10,191 chainNetMm10,481 chainNetMm10,493 chainNetMm10,516 chainNetMm10,534 chainNetMm10,549 chainNetMm10,566 chainNetMm10,705 chainNetMm10,836 chainNetTarSyr2,80 chainNetTarSyr2,90 chainNetTarSyr2,191 chainNetTarSyr2,481 chainNetTarSyr2,493 chainNetTarSyr2,516 chainNetTarSyr2,534 chainNetTarSyr2,549 chainNetTarSyr2,566 chainNetTarSyr2,705 chainNetTarSyr2,836 chainTarSyr2,77 chainTarSyr2,87 chainTarSyr2,188 chainTarSyr2,478 chainTarSyr2,490 chainTarSyr2,513 chainTarSyr2,531 chainTarSyr2,546 chainTarSyr2,563 chainTarSyr2,702 chainTarSyr2,833 gap,1 gap,2 gap,91 gap,102 gap,115 mrna,369 netCalJac3,79 netCalJac3,89 netCalJac3,190 netCalJac3,481 netCalJac3,493 netCalJac3,516 netCalJac3,534 netCalJac3,549 netCalJac3,566 netCalJac3,705 netCalJac3,836 netGorGor3,77 netGorGor3,87 netGorGor3,188 netGorGor3,478 netGorGor3,490 netGorGor3,513 netGorGor3,531 netGorGor3,546 netGorGor3,563 netGorGor3,702 netGorGor3,833 netMm10,77 netMm10,87 netMm10,188 netMm10,478 netMm10,490 netMm10,513 netMm10,531 netMm10,546 netMm10,563 netMm10,702 netMm10,833 netTarSyr2,77 netTarSyr2,87 netTarSyr2,188 netTarSyr2,478 netTarSyr2,490 netTarSyr2,513 netTarSyr2,531 netTarSyr2,546 netTarSyr2,563 netTarSyr2,702 netTarSyr2,833 gapless chainCalJac3,648 chainGorGor3,645 chainMm10,645 chainNetCalJac3,651 chainNetGorGor3,648 chainNetMm10,648 chainNetTarSyr2,648 chainTarSyr2,645 netCalJac3,648 netGorGor3,645 netMm10,645 netTarSyr2,645 gaps chainCalJac3,85 chainCalJac3,96 chainCalJac3,108 chainCalJac3,142 chainCalJac3,167 chainCalJac3,213 chainCalJac3,224 chainCalJac3,408 chainCalJac3,430 chainCalJac3,457 chainCalJac3,891 chainCalJac3,897 chainGorGor3,83 chainGorGor3,94 chainGorGor3,106 chainGorGor3,140 chainGorGor3,165 chainGorGor3,211 chainGorGor3,222 chainGorGor3,405 chainGorGor3,427 chainGorGor3,454 chainGorGor3,888 chainGorGor3,894 chainMm10,83 chainMm10,94 chainMm10,106 chainMm10,140 chainMm10,165 chainMm10,211 chainMm10,222 chainMm10,405 chainMm10,427 chainMm10,454 chainMm10,888 chainMm10,894 chainNetCalJac3,88 chainNetCalJac3,99 chainNetCalJac3,111 chainNetCalJac3,145 chainNetCalJac3,170 chainNetCalJac3,216 chainNetCalJac3,227 chainNetCalJac3,411 chainNetCalJac3,433 chainNetCalJac3,460 chainNetCalJac3,894 chainNetCalJac3,900 chainNetGorGor3,86 chainNetGorGor3,97 chainNetGorGor3,109 chainNetGorGor3,143 chainNetGorGor3,168 chainNetGorGor3,214 chainNetGorGor3,225 chainNetGorGor3,408 chainNetGorGor3,430 chainNetGorGor3,457 chainNetGorGor3,891 chainNetGorGor3,897 chainNetMm10,86 chainNetMm10,97 chainNetMm10,109 chainNetMm10,143 chainNetMm10,168 chainNetMm10,214 chainNetMm10,225 chainNetMm10,408 chainNetMm10,430 chainNetMm10,457 chainNetMm10,891 chainNetMm10,897 chainNetTarSyr2,86 chainNetTarSyr2,97 chainNetTarSyr2,109 chainNetTarSyr2,143 chainNetTarSyr2,168 chainNetTarSyr2,214 chainNetTarSyr2,225 chainNetTarSyr2,408 chainNetTarSyr2,430 chainNetTarSyr2,457 chainNetTarSyr2,891 chainNetTarSyr2,897 chainTarSyr2,83 chainTarSyr2,94 chainTarSyr2,106 chainTarSyr2,140 chainTarSyr2,165 chainTarSyr2,211 chainTarSyr2,222 chainTarSyr2,405 chainTarSyr2,427 chainTarSyr2,454 chainTarSyr2,888 chainTarSyr2,894 gap,12 gap,43 gap,68 gap,124 gap,126 gold,96 netCalJac3,85 netCalJac3,96 netCalJac3,108 netCalJac3,142 netCalJac3,167 netCalJac3,213 netCalJac3,224 netCalJac3,408 netCalJac3,430 netCalJac3,457 netCalJac3,891 netCalJac3,897 netGorGor3,83 netGorGor3,94 netGorGor3,106 netGorGor3,140 netGorGor3,165 netGorGor3,211 netGorGor3,222 netGorGor3,405 netGorGor3,427 netGorGor3,454 netGorGor3,888 netGorGor3,894 netMm10,83 netMm10,94 netMm10,106 netMm10,140 netMm10,165 netMm10,211 netMm10,222 netMm10,405 netMm10,427 netMm10,454 netMm10,888 netMm10,894 netTarSyr2,83 netTarSyr2,94 netTarSyr2,106 netTarSyr2,140 netTarSyr2,165 netTarSyr2,211 netTarSyr2,222 netTarSyr2,405 netTarSyr2,427 netTarSyr2,454 netTarSyr2,888 netTarSyr2,894 gardiner-garden cpgIslandExt,376 cpgIslandExt,604 cpgIslandExtUnmasked,379 cpgIslandExtUnmasked,607 cpgIslandSuper,376 cpgIslandSuper,604 gary microsat,111 simpleRepeat,71 gc cpgIslandExt,262 cpgIslandExtUnmasked,265 cpgIslandSuper,262 gc5Base,1 gc5Base,3 gc5Base,13 gc5Base,30 genbank mrna,8 mrna,23 mrna,387 mrna,478 mrna,502 gene augustusGene,5 augustusGene,10 augustusGene,40 augustusGene,112 augustusGene,157 augustusGene,163 augustusGene,305 augustusGene,320 cpgIslandExt,145 cpgIslandExtUnmasked,148 cpgIslandSuper,145 ensGene,7 ensGene,11 ensGene,23 ensGene,39 ensGene,58 ensGene,155 ensemblGeneScaffold,4 ensemblGeneScaffold,18 ensemblGeneScaffold,41 ensemblGeneScaffold,57 ensemblGeneScaffold,85 genscan,4 genscan,8 genscan,55 genscan,72 genscan,111 genscan,117 genscan,214 xenoRefGene,9 xenoRefGene,54 xenoRefGene,108 xenoRefGene,123 xenoRefGene,128 xenoRefGene,156 xenoRefGene,185 gene-rich gc5Base,36 genepred ensGene,76 generally rmsk,72 generate nestedRepeats,261 nestedRepeats,320 rmsk,343 generated cpgIslandExt,588 cpgIslandExtUnmasked,591 cpgIslandSuper,588 ensGene,14 ensemblGeneScaffold,60 nestedRepeats,282 rmsk,289 xenoRefGene,291 generating augustusGene,189 genes augustusGene,8 augustusGene,44 cpgIslandExt,20 cpgIslandExt,23 cpgIslandExtUnmasked,23 cpgIslandExtUnmasked,26 cpgIslandSuper,20 cpgIslandSuper,23 ensGene,2 ensGene,4 ensGene,5 ensGene,27 ensGene,92 genscan,2 genscan,6 genscan,59 simpleRepeat,41 xenoRefGene,6 xenoRefGene,7 xenoRefGene,19 xenoRefGene,194 xenoRefGene,202 xenoRefGene,213 genet nestedRepeats,354 nestedRepeats,386 nestedRepeats,408 rmsk,377 rmsk,409 rmsk,431 genetic nestedRepeats,52 rmsk,88 genome augustusGene,31 chainCalJac3,20 chainCalJac3,76 chainCalJac3,208 chainCalJac3,283 chainCalJac3,296 chainCalJac3,790 chainCalJac3,1111 chainGorGor3,19 chainGorGor3,74 chainGorGor3,206 chainGorGor3,281 chainGorGor3,294 chainGorGor3,787 chainGorGor3,1108 chainMm10,19 chainMm10,74 chainMm10,206 chainMm10,281 chainMm10,294 chainMm10,787 chainMm10,1108 chainNetCalJac3,23 chainNetCalJac3,79 chainNetCalJac3,211 chainNetCalJac3,286 chainNetCalJac3,299 chainNetCalJac3,793 chainNetCalJac3,1114 chainNetGorGor3,22 chainNetGorGor3,77 chainNetGorGor3,209 chainNetGorGor3,284 chainNetGorGor3,297 chainNetGorGor3,790 chainNetGorGor3,1111 chainNetMm10,22 chainNetMm10,77 chainNetMm10,209 chainNetMm10,284 chainNetMm10,297 chainNetMm10,790 chainNetMm10,1111 chainNetTarSyr2,22 chainNetTarSyr2,77 chainNetTarSyr2,209 chainNetTarSyr2,284 chainNetTarSyr2,297 chainNetTarSyr2,790 chainNetTarSyr2,1111 chainTarSyr2,19 chainTarSyr2,74 chainTarSyr2,206 chainTarSyr2,281 chainTarSyr2,294 chainTarSyr2,787 chainTarSyr2,1108 cpgIslandExt,164 cpgIslandExt,302 cpgIslandExtUnmasked,167 cpgIslandExtUnmasked,305 cpgIslandSuper,164 cpgIslandSuper,302 ensGene,164 ensGene,192 ensemblGeneScaffold,131 gap,19 gap,21 gap,129 gold,21 gold,23 gold,151 mrna,26 mrna,395 mrna,525 nestedRepeats,405 netCalJac3,20 netCalJac3,76 netCalJac3,208 netCalJac3,283 netCalJac3,296 netCalJac3,790 netCalJac3,1111 netGorGor3,19 netGorGor3,74 netGorGor3,206 netGorGor3,281 netGorGor3,294 netGorGor3,787 netGorGor3,1108 netMm10,19 netMm10,74 netMm10,206 netMm10,281 netMm10,294 netMm10,787 netMm10,1108 netTarSyr2,19 netTarSyr2,74 netTarSyr2,206 netTarSyr2,281 netTarSyr2,294 netTarSyr2,787 netTarSyr2,1108 rmsk,428 xenoRefGene,226 xenoRefGene,309 genomes chainCalJac3,26 chainCalJac3,592 chainCalJac3,1073 chainGorGor3,25 chainGorGor3,589 chainGorGor3,1070 chainMm10,25 chainMm10,589 chainMm10,1070 chainNetCalJac3,29 chainNetCalJac3,595 chainNetCalJac3,1076 chainNetGorGor3,28 chainNetGorGor3,592 chainNetGorGor3,1073 chainNetMm10,28 chainNetMm10,592 chainNetMm10,1073 chainNetTarSyr2,28 chainNetTarSyr2,592 chainNetTarSyr2,1073 chainTarSyr2,25 chainTarSyr2,589 chainTarSyr2,1070 cpgIslandExt,612 cpgIslandExtUnmasked,615 cpgIslandSuper,612 nestedRepeats,369 nestedRepeats,383 netCalJac3,26 netCalJac3,592 netCalJac3,1073 netGorGor3,25 netGorGor3,589 netGorGor3,1070 netMm10,25 netMm10,589 netMm10,1070 netTarSyr2,25 netTarSyr2,589 netTarSyr2,1070 rmsk,392 rmsk,406 windowmaskerSdust,105 xenoRefGene,378 genomic chainCalJac3,500 chainCalJac3,1025 chainCalJac3,1041 chainGorGor3,497 chainGorGor3,1022 chainGorGor3,1038 chainMm10,497 chainMm10,1022 chainMm10,1038 chainNetCalJac3,503 chainNetCalJac3,1028 chainNetCalJac3,1044 chainNetGorGor3,500 chainNetGorGor3,1025 chainNetGorGor3,1041 chainNetMm10,500 chainNetMm10,1025 chainNetMm10,1041 chainNetTarSyr2,500 chainNetTarSyr2,1025 chainNetTarSyr2,1041 chainTarSyr2,497 chainTarSyr2,1022 chainTarSyr2,1038 genscan,92 genscan,218 mrna,346 mrna,437 netCalJac3,500 netCalJac3,1025 netCalJac3,1041 netGorGor3,497 netGorGor3,1022 netGorGor3,1038 netMm10,497 netMm10,1022 netMm10,1038 netTarSyr2,497 netTarSyr2,1022 netTarSyr2,1038 windowmaskerSdust,3 xenoRefGene,164 xenoRefGene,276 genomics chainCalJac3,12 chainGorGor3,11 chainMm10,11 chainNetCalJac3,15 chainNetCalJac3Viewchain,13 chainNetCalJac3Viewnet,13 chainNetGorGor3,14 chainNetGorGor3Viewchain,12 chainNetGorGor3Viewnet,12 chainNetMm10,14 chainNetMm10Viewchain,12 chainNetMm10Viewnet,12 chainNetTarSyr2,14 chainNetTarSyr2Viewchain,12 chainNetTarSyr2Viewnet,12 chainTarSyr2,11 netCalJac3,12 netGorGor3,11 netMm10,11 netTarSyr2,11 genscan genscan,1 genscan,3 genscan,17 genscan,136 genscan,177 gertz windowmaskerSdust,92 giri nestedRepeats,56 nestedRepeats,310 rmsk,92 rmsk,333 go genscan,113 mrna,354 mrna,377 xenoRefGene,181 gold gold,91 gold,105 gorgor3 chainGorGor3,7 chainGorGor3,69 chainGorGor3,309 chainNetGorGor3,8 chainNetGorGor3,72 chainNetGorGor3,312 chainNetGorGor3Viewchain,6 chainNetGorGor3Viewnet,6 netGorGor3,7 netGorGor3,69 netGorGor3,309 gorgor3.1 chainGorGor3,6 chainGorGor3,68 chainGorGor3,308 chainNetGorGor3,7 chainNetGorGor3,71 chainNetGorGor3,311 chainNetGorGor3Viewchain,5 chainNetGorGor3Viewnet,5 netGorGor3,6 netGorGor3,68 netGorGor3,308 gorilla chainGorGor3,1 chainGorGor3,3 chainGorGor3,65 chainGorGor3,97 chainGorGor3,150 chainGorGor3,270 chainGorGor3,297 chainGorGor3,578 chainGorGor3,627 chainNetGorGor3,1 chainNetGorGor3,4 chainNetGorGor3,68 chainNetGorGor3,100 chainNetGorGor3,153 chainNetGorGor3,273 chainNetGorGor3,300 chainNetGorGor3,581 chainNetGorGor3,630 chainNetGorGor3Viewchain,2 chainNetGorGor3Viewnet,2 netGorGor3,1 netGorGor3,3 netGorGor3,65 netGorGor3,97 netGorGor3,150 netGorGor3,270 netGorGor3,297 netGorGor3,578 netGorGor3,627 gr xenoRefGene,323 graph gc5Base,59 gc5Base,78 quality,74 graphical chainCalJac3,447 chainGorGor3,444 chainMm10,444 chainNetCalJac3,450 chainNetGorGor3,447 chainNetMm10,447 chainNetTarSyr2,447 chainTarSyr2,444 gold,130 netCalJac3,447 netGorGor3,444 netMm10,444 netTarSyr2,444 quality,102 rmsk,211 gray ensemblGeneScaffold,34 ensemblGeneScaffold,35 grcm38 chainMm10,6 chainMm10,68 chainMm10,308 chainNetMm10,7 chainNetMm10,71 chainNetMm10,311 chainNetMm10Viewchain,5 chainNetMm10Viewnet,5 netMm10,6 netMm10,68 netMm10,308 greater cpgIslandExt,267 cpgIslandExt,269 cpgIslandExt,274 cpgIslandExtUnmasked,270 cpgIslandExtUnmasked,272 cpgIslandExtUnmasked,277 cpgIslandSuper,267 cpgIslandSuper,269 cpgIslandSuper,274 green cpgIslandExt,10 cpgIslandExtUnmasked,13 cpgIslandSuper,10 nestedRepeats,328 rmsk,351 group augustusGene,198 augustusGene,235 chainCalJac3,640 chainGorGor3,637 chainMm10,637 chainNetCalJac3,643 chainNetGorGor3,640 chainNetMm10,640 chainNetTarSyr2,640 chainTarSyr2,637 netCalJac3,640 netGorGor3,637 netMm10,637 netTarSyr2,637 groups augustusGene,194 gs cpgIslandExt,294 cpgIslandExtUnmasked,297 cpgIslandSuper,294 gt cpgIslandExt,422 cpgIslandExt,488 cpgIslandExtUnmasked,425 cpgIslandExtUnmasked,491 cpgIslandSuper,422 cpgIslandSuper,488 gtf ensGene,96 guanine cpgIslandExt,52 cpgIslandExtUnmasked,55 cpgIslandSuper,52 gc5Base,21 hard cpgIslandExt,416 cpgIslandExtUnmasked,419 cpgIslandSuper,416 hardison chainCalJac3,944 chainCalJac3,1101 chainGorGor3,941 chainGorGor3,1098 chainMm10,941 chainMm10,1098 chainNetCalJac3,947 chainNetCalJac3,1104 chainNetGorGor3,944 chainNetGorGor3,1101 chainNetMm10,944 chainNetMm10,1101 chainNetTarSyr2,944 chainNetTarSyr2,1101 chainTarSyr2,941 chainTarSyr2,1098 netCalJac3,944 netCalJac3,1101 netGorGor3,941 netGorGor3,1098 netMm10,941 netMm10,1098 netTarSyr2,941 netTarSyr2,1098 harris chainCalJac3,1018 chainGorGor3,1015 chainMm10,1015 chainNetCalJac3,1021 chainNetGorGor3,1018 chainNetMm10,1018 chainNetTarSyr2,1018 chainTarSyr2,1015 netCalJac3,1018 netGorGor3,1015 netMm10,1015 netTarSyr2,1015 hart xenoRefGene,334 has mrna,63 nestedRepeats,246 xenoRefGene,68 haussler augustusGene,292 chainCalJac3,979 chainCalJac3,1059 chainCalJac3,1103 chainGorGor3,976 chainGorGor3,1056 chainGorGor3,1100 chainMm10,976 chainMm10,1056 chainMm10,1100 chainNetCalJac3,982 chainNetCalJac3,1062 chainNetCalJac3,1106 chainNetGorGor3,979 chainNetGorGor3,1059 chainNetGorGor3,1103 chainNetMm10,979 chainNetMm10,1059 chainNetMm10,1103 chainNetTarSyr2,979 chainNetTarSyr2,1059 chainNetTarSyr2,1103 chainTarSyr2,976 chainTarSyr2,1056 chainTarSyr2,1100 netCalJac3,979 netCalJac3,1059 netCalJac3,1103 netGorGor3,976 netGorGor3,1056 netGorGor3,1100 netMm10,976 netMm10,1056 netMm10,1100 netTarSyr2,976 netTarSyr2,1056 netTarSyr2,1100 have chainCalJac3,576 chainGorGor3,573 chainMm10,573 chainNetCalJac3,579 chainNetGorGor3,576 chainNetMm10,576 chainNetTarSyr2,576 chainTarSyr2,573 nestedRepeats,88 netCalJac3,576 netGorGor3,573 netMm10,573 netTarSyr2,573 rmsk,69 rmsk,108 having cpgIslandExt,138 cpgIslandExtUnmasked,141 cpgIslandSuper,138 mrna,410 mrna,419 xenoRefGene,249 xenoRefGene,258 height quality,28 heights quality,49 help cpgIslandExt,546 cpgIslandExtUnmasked,549 cpgIslandSuper,546 ensGene,126 gc5Base,61 quality,76 helpful mrna,91 helps cpgIslandExt,74 cpgIslandExtUnmasked,77 cpgIslandSuper,74 here rmsk,127 hgdownload.soe.ucsc.edu cpgIslandExt,576 cpgIslandExtUnmasked,579 cpgIslandSuper,576 hiatt xenoRefGene,324 hidden augustusGene,324 hide xenoRefGene,192 hierarchy chainCalJac3,827 chainGorGor3,824 chainMm10,824 chainNetCalJac3,830 chainNetGorGor3,827 chainNetMm10,827 chainNetTarSyr2,827 chainTarSyr2,824 netCalJac3,827 netGorGor3,824 netMm10,824 netTarSyr2,824 high gc5Base,29 higher chainCalJac3,859 chainGorGor3,856 chainMm10,856 chainNetCalJac3,862 chainNetGorGor3,859 chainNetMm10,859 chainNetTarSyr2,859 chainTarSyr2,856 cpgIslandExt,157 cpgIslandExtUnmasked,160 cpgIslandSuper,157 netCalJac3,859 netGorGor3,856 netMm10,856 netTarSyr2,856 rmsk,230 higher-level chainCalJac3,876 chainGorGor3,873 chainMm10,873 chainNetCalJac3,879 chainNetGorGor3,876 chainNetMm10,876 chainNetTarSyr2,876 chainTarSyr2,873 netCalJac3,876 netGorGor3,873 netMm10,873 netTarSyr2,873 higher-scoring chainCalJac3,820 chainCalJac3,839 chainGorGor3,817 chainGorGor3,836 chainMm10,817 chainMm10,836 chainNetCalJac3,823 chainNetCalJac3,842 chainNetGorGor3,820 chainNetGorGor3,839 chainNetMm10,820 chainNetMm10,839 chainNetTarSyr2,820 chainNetTarSyr2,839 chainTarSyr2,817 chainTarSyr2,836 netCalJac3,820 netCalJac3,839 netGorGor3,817 netGorGor3,836 netMm10,817 netMm10,836 netTarSyr2,817 netTarSyr2,836 highest mrna,412 xenoRefGene,251 highest-scoring chainCalJac3,399 chainCalJac3,786 chainGorGor3,396 chainGorGor3,783 chainMm10,396 chainMm10,783 chainNetCalJac3,402 chainNetCalJac3,789 chainNetGorGor3,399 chainNetGorGor3,786 chainNetMm10,399 chainNetMm10,786 chainNetTarSyr2,399 chainNetTarSyr2,786 chainTarSyr2,396 chainTarSyr2,783 netCalJac3,399 netCalJac3,786 netGorGor3,396 netGorGor3,783 netMm10,396 netMm10,783 netTarSyr2,396 netTarSyr2,783 highlight gc5Base,49 mrna,282 quality,65 highlighted mrna,252 mrna,270 highly microsat,40 hillier cpgIslandExt,601 cpgIslandExtUnmasked,604 cpgIslandSuper,601 hinrichs chainCalJac3,1055 chainGorGor3,1052 chainMm10,1052 chainNetCalJac3,1058 chainNetGorGor3,1055 chainNetMm10,1055 chainNetTarSyr2,1055 chainTarSyr2,1052 netCalJac3,1055 netGorGor3,1052 netMm10,1052 netTarSyr2,1052 hiram gc5Base,82 quality,108 his chainCalJac3,953 chainGorGor3,950 chainMm10,950 chainNetCalJac3,956 chainNetGorGor3,953 chainNetMm10,953 chainNetTarSyr2,953 chainTarSyr2,950 netCalJac3,953 netGorGor3,950 netMm10,950 netTarSyr2,950 honeybee1 augustusGene,217 horizontal nestedRepeats,130 nestedRepeats,150 hou chainCalJac3,932 chainGorGor3,929 chainMm10,929 chainNetCalJac3,935 chainNetGorGor3,932 chainNetMm10,932 chainNetTarSyr2,932 chainTarSyr2,929 netCalJac3,932 netGorGor3,929 netMm10,929 netTarSyr2,929 housekeeping cpgIslandExt,22 cpgIslandExtUnmasked,25 cpgIslandSuper,22 how chainCalJac3,887 chainCalJac3,904 chainGorGor3,884 chainGorGor3,901 chainMm10,884 chainMm10,901 chainNetCalJac3,890 chainNetCalJac3,907 chainNetGorGor3,887 chainNetGorGor3,904 chainNetMm10,887 chainNetMm10,904 chainNetTarSyr2,887 chainNetTarSyr2,904 chainTarSyr2,884 chainTarSyr2,901 netCalJac3,887 netCalJac3,904 netGorGor3,884 netGorGor3,901 netMm10,884 netMm10,901 netTarSyr2,884 netTarSyr2,901 rmsk,121 however cpgIslandExt,96 cpgIslandExtUnmasked,99 cpgIslandSuper,96 http cpgIslandExt,575 cpgIslandExtUnmasked,578 cpgIslandSuper,575 nestedRepeats,332 rmsk,355 hubbard ensGene,44 ensGene,168 ensemblGeneScaffold,89 ensemblGeneScaffold,107 hubley nestedRepeats,308 nestedRepeats,326 rmsk,331 rmsk,349 human augustusGene,205 augustusGene,210 augustusGene,276 chainCalJac3,1072 chainGorGor3,1069 chainMm10,1069 chainNetCalJac3,1075 chainNetGorGor3,1072 chainNetMm10,1072 chainNetTarSyr2,1072 chainTarSyr2,1069 genscan,217 nestedRepeats,404 netCalJac3,1072 netGorGor3,1069 netMm10,1069 netTarSyr2,1069 rmsk,427 human-mouse chainCalJac3,1107 chainGorGor3,1104 chainMm10,1104 chainNetCalJac3,1110 chainNetGorGor3,1107 chainNetMm10,1107 chainNetTarSyr2,1107 chainTarSyr2,1104 netCalJac3,1107 netGorGor3,1104 netMm10,1104 netTarSyr2,1104 i mrna,471 mrna,495 id nestedRepeats,10 nestedRepeats,106 identified chainCalJac3,948 chainGorGor3,945 chainMm10,945 chainNetCalJac3,951 chainNetGorGor3,948 chainNetMm10,948 chainNetTarSyr2,948 chainTarSyr2,945 netCalJac3,948 netGorGor3,945 netMm10,945 netTarSyr2,945 xenoRefGene,255 identifying cpgIslandExt,249 cpgIslandExtUnmasked,252 cpgIslandSuper,249 identity microsat,71 mrna,414 mrna,422 mrna,434 nestedRepeats,187 nestedRepeats,222 xenoRefGene,253 xenoRefGene,261 xenoRefGene,273 ideogram cytoBandIdeo,3 cytoBandIdeo,4 if gap,77 mrna,225 mrna,237 mrna,253 mrna,289 mrna,306 nestedRepeats,137 xenoRefGene,205 ii215-25 augustusGene,338 immediately cpgIslandExt,48 cpgIslandExtUnmasked,51 cpgIslandSuper,48 imperfect simpleRepeat,19 improve augustusGene,302 improved chainCalJac3,1021 chainGorGor3,1018 chainMm10,1018 chainNetCalJac3,1024 chainNetGorGor3,1021 chainNetMm10,1021 chainNetTarSyr2,1021 chainTarSyr2,1018 netCalJac3,1021 netGorGor3,1018 netMm10,1018 netTarSyr2,1018 in augustusGene,101 chainCalJac3,32 chainCalJac3,97 chainCalJac3,118 chainCalJac3,150 chainCalJac3,157 chainCalJac3,172 chainCalJac3,191 chainCalJac3,194 chainCalJac3,234 chainCalJac3,255 chainCalJac3,302 chainCalJac3,336 chainCalJac3,366 chainCalJac3,378 chainCalJac3,387 chainCalJac3,405 chainCalJac3,410 chainCalJac3,419 chainCalJac3,431 chainCalJac3,445 chainCalJac3,487 chainCalJac3,504 chainCalJac3,535 chainCalJac3,553 chainCalJac3,567 chainCalJac3,603 chainCalJac3,700 chainCalJac3,788 chainCalJac3,829 chainCalJac3,837 chainCalJac3,853 chainCalJac3,886 chainCalJac3,898 chainCalJac3,1068 chainGorGor3,31 chainGorGor3,95 chainGorGor3,116 chainGorGor3,148 chainGorGor3,155 chainGorGor3,170 chainGorGor3,189 chainGorGor3,192 chainGorGor3,232 chainGorGor3,253 chainGorGor3,300 chainGorGor3,333 chainGorGor3,363 chainGorGor3,375 chainGorGor3,384 chainGorGor3,402 chainGorGor3,407 chainGorGor3,416 chainGorGor3,428 chainGorGor3,442 chainGorGor3,484 chainGorGor3,501 chainGorGor3,532 chainGorGor3,550 chainGorGor3,564 chainGorGor3,600 chainGorGor3,697 chainGorGor3,785 chainGorGor3,826 chainGorGor3,834 chainGorGor3,850 chainGorGor3,883 chainGorGor3,895 chainGorGor3,1065 chainMm10,31 chainMm10,95 chainMm10,116 chainMm10,148 chainMm10,155 chainMm10,170 chainMm10,189 chainMm10,192 chainMm10,232 chainMm10,253 chainMm10,300 chainMm10,333 chainMm10,363 chainMm10,375 chainMm10,384 chainMm10,402 chainMm10,407 chainMm10,416 chainMm10,428 chainMm10,442 chainMm10,484 chainMm10,501 chainMm10,532 chainMm10,550 chainMm10,564 chainMm10,600 chainMm10,697 chainMm10,785 chainMm10,826 chainMm10,834 chainMm10,850 chainMm10,883 chainMm10,895 chainMm10,1065 chainNetCalJac3,35 chainNetCalJac3,100 chainNetCalJac3,121 chainNetCalJac3,153 chainNetCalJac3,160 chainNetCalJac3,175 chainNetCalJac3,194 chainNetCalJac3,197 chainNetCalJac3,237 chainNetCalJac3,258 chainNetCalJac3,305 chainNetCalJac3,339 chainNetCalJac3,369 chainNetCalJac3,381 chainNetCalJac3,390 chainNetCalJac3,408 chainNetCalJac3,413 chainNetCalJac3,422 chainNetCalJac3,434 chainNetCalJac3,448 chainNetCalJac3,490 chainNetCalJac3,507 chainNetCalJac3,538 chainNetCalJac3,556 chainNetCalJac3,570 chainNetCalJac3,606 chainNetCalJac3,703 chainNetCalJac3,791 chainNetCalJac3,832 chainNetCalJac3,840 chainNetCalJac3,856 chainNetCalJac3,889 chainNetCalJac3,901 chainNetCalJac3,1071 chainNetGorGor3,34 chainNetGorGor3,98 chainNetGorGor3,119 chainNetGorGor3,151 chainNetGorGor3,158 chainNetGorGor3,173 chainNetGorGor3,192 chainNetGorGor3,195 chainNetGorGor3,235 chainNetGorGor3,256 chainNetGorGor3,303 chainNetGorGor3,336 chainNetGorGor3,366 chainNetGorGor3,378 chainNetGorGor3,387 chainNetGorGor3,405 chainNetGorGor3,410 chainNetGorGor3,419 chainNetGorGor3,431 chainNetGorGor3,445 chainNetGorGor3,487 chainNetGorGor3,504 chainNetGorGor3,535 chainNetGorGor3,553 chainNetGorGor3,567 chainNetGorGor3,603 chainNetGorGor3,700 chainNetGorGor3,788 chainNetGorGor3,829 chainNetGorGor3,837 chainNetGorGor3,853 chainNetGorGor3,886 chainNetGorGor3,898 chainNetGorGor3,1068 chainNetMm10,34 chainNetMm10,98 chainNetMm10,119 chainNetMm10,151 chainNetMm10,158 chainNetMm10,173 chainNetMm10,192 chainNetMm10,195 chainNetMm10,235 chainNetMm10,256 chainNetMm10,303 chainNetMm10,336 chainNetMm10,366 chainNetMm10,378 chainNetMm10,387 chainNetMm10,405 chainNetMm10,410 chainNetMm10,419 chainNetMm10,431 chainNetMm10,445 chainNetMm10,487 chainNetMm10,504 chainNetMm10,535 chainNetMm10,553 chainNetMm10,567 chainNetMm10,603 chainNetMm10,700 chainNetMm10,788 chainNetMm10,829 chainNetMm10,837 chainNetMm10,853 chainNetMm10,886 chainNetMm10,898 chainNetMm10,1068 chainNetTarSyr2,34 chainNetTarSyr2,98 chainNetTarSyr2,119 chainNetTarSyr2,151 chainNetTarSyr2,158 chainNetTarSyr2,173 chainNetTarSyr2,192 chainNetTarSyr2,195 chainNetTarSyr2,235 chainNetTarSyr2,256 chainNetTarSyr2,303 chainNetTarSyr2,336 chainNetTarSyr2,366 chainNetTarSyr2,378 chainNetTarSyr2,387 chainNetTarSyr2,405 chainNetTarSyr2,410 chainNetTarSyr2,419 chainNetTarSyr2,431 chainNetTarSyr2,445 chainNetTarSyr2,487 chainNetTarSyr2,504 chainNetTarSyr2,535 chainNetTarSyr2,553 chainNetTarSyr2,567 chainNetTarSyr2,603 chainNetTarSyr2,700 chainNetTarSyr2,788 chainNetTarSyr2,829 chainNetTarSyr2,837 chainNetTarSyr2,853 chainNetTarSyr2,886 chainNetTarSyr2,898 chainNetTarSyr2,1068 chainTarSyr2,31 chainTarSyr2,95 chainTarSyr2,116 chainTarSyr2,148 chainTarSyr2,155 chainTarSyr2,170 chainTarSyr2,189 chainTarSyr2,192 chainTarSyr2,232 chainTarSyr2,253 chainTarSyr2,300 chainTarSyr2,333 chainTarSyr2,363 chainTarSyr2,375 chainTarSyr2,384 chainTarSyr2,402 chainTarSyr2,407 chainTarSyr2,416 chainTarSyr2,428 chainTarSyr2,442 chainTarSyr2,484 chainTarSyr2,501 chainTarSyr2,532 chainTarSyr2,550 chainTarSyr2,564 chainTarSyr2,600 chainTarSyr2,697 chainTarSyr2,785 chainTarSyr2,826 chainTarSyr2,834 chainTarSyr2,850 chainTarSyr2,883 chainTarSyr2,895 chainTarSyr2,1065 cpgIslandExt,24 cpgIslandExt,58 cpgIslandExt,64 cpgIslandExt,87 cpgIslandExt,180 cpgIslandExt,189 cpgIslandExt,214 cpgIslandExt,297 cpgIslandExt,341 cpgIslandExt,375 cpgIslandExt,610 cpgIslandExtUnmasked,27 cpgIslandExtUnmasked,61 cpgIslandExtUnmasked,67 cpgIslandExtUnmasked,90 cpgIslandExtUnmasked,183 cpgIslandExtUnmasked,192 cpgIslandExtUnmasked,217 cpgIslandExtUnmasked,300 cpgIslandExtUnmasked,344 cpgIslandExtUnmasked,378 cpgIslandExtUnmasked,613 cpgIslandSuper,24 cpgIslandSuper,58 cpgIslandSuper,64 cpgIslandSuper,87 cpgIslandSuper,180 cpgIslandSuper,189 cpgIslandSuper,214 cpgIslandSuper,297 cpgIslandSuper,341 cpgIslandSuper,375 cpgIslandSuper,610 ensGene,37 ensGene,50 ensGene,83 ensGene,90 ensGene,95 ensemblGeneScaffold,31 ensemblGeneScaffold,47 ensemblGeneScaffold,83 ensemblGeneScaffold,93 gap,13 gap,26 gap,44 gap,74 gc5Base,5 gc5Base,26 gc5Base,43 genscan,101 genscan,150 genscan,162 genscan,165 genscan,184 genscan,188 genscan,198 genscan,216 gold,15 gold,28 gold,67 gold,128 gold,139 gold,147 microsat,42 microsat,49 mrna,22 mrna,41 mrna,97 mrna,118 mrna,141 mrna,151 mrna,169 mrna,222 mrna,405 nestedRepeats,61 nestedRepeats,64 nestedRepeats,75 nestedRepeats,115 nestedRepeats,156 nestedRepeats,167 nestedRepeats,241 nestedRepeats,339 nestedRepeats,367 nestedRepeats,381 nestedRepeats,402 netCalJac3,32 netCalJac3,97 netCalJac3,118 netCalJac3,150 netCalJac3,157 netCalJac3,172 netCalJac3,191 netCalJac3,194 netCalJac3,234 netCalJac3,255 netCalJac3,302 netCalJac3,336 netCalJac3,366 netCalJac3,378 netCalJac3,387 netCalJac3,405 netCalJac3,410 netCalJac3,419 netCalJac3,431 netCalJac3,445 netCalJac3,487 netCalJac3,504 netCalJac3,535 netCalJac3,553 netCalJac3,567 netCalJac3,603 netCalJac3,700 netCalJac3,788 netCalJac3,829 netCalJac3,837 netCalJac3,853 netCalJac3,886 netCalJac3,898 netCalJac3,1068 netGorGor3,31 netGorGor3,95 netGorGor3,116 netGorGor3,148 netGorGor3,155 netGorGor3,170 netGorGor3,189 netGorGor3,192 netGorGor3,232 netGorGor3,253 netGorGor3,300 netGorGor3,333 netGorGor3,363 netGorGor3,375 netGorGor3,384 netGorGor3,402 netGorGor3,407 netGorGor3,416 netGorGor3,428 netGorGor3,442 netGorGor3,484 netGorGor3,501 netGorGor3,532 netGorGor3,550 netGorGor3,564 netGorGor3,600 netGorGor3,697 netGorGor3,785 netGorGor3,826 netGorGor3,834 netGorGor3,850 netGorGor3,883 netGorGor3,895 netGorGor3,1065 netMm10,31 netMm10,95 netMm10,116 netMm10,148 netMm10,155 netMm10,170 netMm10,189 netMm10,192 netMm10,232 netMm10,253 netMm10,300 netMm10,333 netMm10,363 netMm10,375 netMm10,384 netMm10,402 netMm10,407 netMm10,416 netMm10,428 netMm10,442 netMm10,484 netMm10,501 netMm10,532 netMm10,550 netMm10,564 netMm10,600 netMm10,697 netMm10,785 netMm10,826 netMm10,834 netMm10,850 netMm10,883 netMm10,895 netMm10,1065 netTarSyr2,31 netTarSyr2,95 netTarSyr2,116 netTarSyr2,148 netTarSyr2,155 netTarSyr2,170 netTarSyr2,189 netTarSyr2,192 netTarSyr2,232 netTarSyr2,253 netTarSyr2,300 netTarSyr2,333 netTarSyr2,363 netTarSyr2,375 netTarSyr2,384 netTarSyr2,402 netTarSyr2,407 netTarSyr2,416 netTarSyr2,428 netTarSyr2,442 netTarSyr2,484 netTarSyr2,501 netTarSyr2,532 netTarSyr2,550 netTarSyr2,564 netTarSyr2,600 netTarSyr2,697 netTarSyr2,785 netTarSyr2,826 netTarSyr2,834 netTarSyr2,850 netTarSyr2,883 netTarSyr2,895 netTarSyr2,1065 quality,24 quality,59 rmsk,45 rmsk,63 rmsk,97 rmsk,100 rmsk,128 rmsk,139 rmsk,209 rmsk,270 rmsk,317 rmsk,362 rmsk,390 rmsk,404 rmsk,425 windowmaskerSdust,27 xenoRefGene,244 include mrna,79 mrna,284 mrna,308 rmsk,159 rmsk,172 included augustusGene,160 cpgIslandExt,306 cpgIslandExtUnmasked,309 cpgIslandSuper,306 windowmaskerSdust,26 includes rmsk,198 including rmsk,188 indels microsat,74 indicate chainCalJac3,141 chainCalJac3,249 chainGorGor3,139 chainGorGor3,247 chainMm10,139 chainMm10,247 chainNetCalJac3,144 chainNetCalJac3,252 chainNetGorGor3,142 chainNetGorGor3,250 chainNetMm10,142 chainNetMm10,250 chainNetTarSyr2,142 chainNetTarSyr2,250 chainTarSyr2,139 chainTarSyr2,247 ensemblGeneScaffold,37 mrna,52 nestedRepeats,153 netCalJac3,141 netCalJac3,249 netGorGor3,139 netGorGor3,247 netMm10,139 netMm10,247 netTarSyr2,139 netTarSyr2,247 indicates quality,35 xenoRefGene,60 individual chainCalJac3,246 chainCalJac3,502 chainGorGor3,244 chainGorGor3,499 chainMm10,244 chainMm10,499 chainNetCalJac3,249 chainNetCalJac3,505 chainNetGorGor3,247 chainNetGorGor3,502 chainNetMm10,247 chainNetMm10,502 chainNetTarSyr2,247 chainNetTarSyr2,502 chainTarSyr2,244 chainTarSyr2,499 netCalJac3,246 netCalJac3,502 netGorGor3,244 netGorGor3,499 netMm10,244 netMm10,499 netTarSyr2,244 netTarSyr2,499 information augustusGene,36 chainCalJac3,465 chainCalJac3,478 chainCalJac3,484 chainCalJac3,854 chainGorGor3,462 chainGorGor3,475 chainGorGor3,481 chainGorGor3,851 chainMm10,462 chainMm10,475 chainMm10,481 chainMm10,851 chainNetCalJac3,468 chainNetCalJac3,481 chainNetCalJac3,487 chainNetCalJac3,857 chainNetGorGor3,465 chainNetGorGor3,478 chainNetGorGor3,484 chainNetGorGor3,854 chainNetMm10,465 chainNetMm10,478 chainNetMm10,484 chainNetMm10,854 chainNetTarSyr2,465 chainNetTarSyr2,478 chainNetTarSyr2,484 chainNetTarSyr2,854 chainTarSyr2,462 chainTarSyr2,475 chainTarSyr2,481 chainTarSyr2,851 cpgIslandExt,542 cpgIslandExtUnmasked,545 cpgIslandSuper,542 ensGene,19 ensGene,159 gap,35 gc5Base,55 genscan,51 genscan,126 gold,37 microsat,97 mrna,350 mrna,376 nestedRepeats,53 nestedRepeats,301 netCalJac3,465 netCalJac3,478 netCalJac3,484 netCalJac3,854 netGorGor3,462 netGorGor3,475 netGorGor3,481 netGorGor3,851 netMm10,462 netMm10,475 netMm10,481 netMm10,851 netTarSyr2,462 netTarSyr2,475 netTarSyr2,481 netTarSyr2,851 quality,71 rmsk,89 rmsk,324 simpleRepeat,58 xenoRefGene,177 initiate rmsk,316 initio augustusGene,4 augustusGene,17 input windowmaskerSdust,61 windowmaskerSdust,70 inserted chainCalJac3,578 chainCalJac3,910 chainGorGor3,575 chainGorGor3,907 chainMm10,575 chainMm10,907 chainNetCalJac3,581 chainNetCalJac3,913 chainNetGorGor3,578 chainNetGorGor3,910 chainNetMm10,578 chainNetMm10,910 chainNetTarSyr2,578 chainNetTarSyr2,910 chainTarSyr2,575 chainTarSyr2,907 netCalJac3,578 netCalJac3,910 netGorGor3,575 netGorGor3,907 netMm10,575 netMm10,907 netTarSyr2,575 netTarSyr2,907 insertion chainCalJac3,156 chainGorGor3,154 chainMm10,154 chainNetCalJac3,159 chainNetGorGor3,157 chainNetMm10,157 chainNetTarSyr2,157 chainTarSyr2,154 mrna,381 netCalJac3,156 netGorGor3,154 netMm10,154 netTarSyr2,154 rmsk,223 insertions nestedRepeats,86 nestedRepeats,92 instead xenoRefGene,120 institute nestedRepeats,55 rmsk,91 instructions ensGene,117 integrator cpgIslandExt,526 cpgIslandExtUnmasked,529 cpgIslandSuper,526 ensGene,71 interactively cpgIslandExt,515 cpgIslandExtUnmasked,518 cpgIslandSuper,515 ensGene,63 intergenic genscan,47 international mrna,456 internet nestedRepeats,279 interrupted nestedRepeats,1 nestedRepeats,5 nestedRepeats,21 nestedRepeats,90 nestedRepeats,121 interspersed nestedRepeats,36 nestedRepeats,373 nestedRepeats,400 rmsk,26 rmsk,154 rmsk,162 rmsk,396 rmsk,423 intervals windowmaskerSdust,4 into chainCalJac3,609 chainCalJac3,621 chainCalJac3,638 chainCalJac3,813 chainGorGor3,606 chainGorGor3,618 chainGorGor3,635 chainGorGor3,810 chainMm10,606 chainMm10,618 chainMm10,635 chainMm10,810 chainNetCalJac3,612 chainNetCalJac3,624 chainNetCalJac3,641 chainNetCalJac3,816 chainNetGorGor3,609 chainNetGorGor3,621 chainNetGorGor3,638 chainNetGorGor3,813 chainNetMm10,609 chainNetMm10,621 chainNetMm10,638 chainNetMm10,813 chainNetTarSyr2,609 chainNetTarSyr2,621 chainNetTarSyr2,638 chainNetTarSyr2,813 chainTarSyr2,606 chainTarSyr2,618 chainTarSyr2,635 chainTarSyr2,810 cpgIslandExt,105 cpgIslandExtUnmasked,108 cpgIslandSuper,105 mrna,201 netCalJac3,609 netCalJac3,621 netCalJac3,638 netCalJac3,813 netGorGor3,606 netGorGor3,618 netGorGor3,635 netGorGor3,810 netMm10,606 netMm10,618 netMm10,635 netMm10,810 netTarSyr2,606 netTarSyr2,618 netTarSyr2,635 netTarSyr2,810 windowmaskerSdust,80 intron augustusGene,88 augustusGene,330 introns chainCalJac3,57 chainGorGor3,56 chainMm10,56 chainNetCalJac3,60 chainNetGorGor3,59 chainNetMm10,59 chainNetTarSyr2,59 chainTarSyr2,56 genscan,45 netCalJac3,57 netGorGor3,56 netMm10,56 netTarSyr2,56 inv chainCalJac3,540 chainGorGor3,537 chainMm10,537 chainNetCalJac3,543 chainNetGorGor3,540 chainNetMm10,540 chainNetTarSyr2,540 chainTarSyr2,537 netCalJac3,540 netGorGor3,537 netMm10,537 netTarSyr2,537 inversions chainCalJac3,114 chainCalJac3,179 chainGorGor3,112 chainGorGor3,177 chainMm10,112 chainMm10,177 chainNetCalJac3,117 chainNetCalJac3,182 chainNetGorGor3,115 chainNetGorGor3,180 chainNetMm10,115 chainNetMm10,180 chainNetTarSyr2,115 chainNetTarSyr2,180 chainTarSyr2,112 chainTarSyr2,177 netCalJac3,114 netCalJac3,179 netGorGor3,112 netGorGor3,177 netMm10,112 netMm10,177 netTarSyr2,112 netTarSyr2,177 inverted chainCalJac3,872 chainGorGor3,869 chainMm10,869 chainNetCalJac3,875 chainNetGorGor3,872 chainNetMm10,872 chainNetTarSyr2,872 chainTarSyr2,869 netCalJac3,872 netGorGor3,869 netMm10,869 netTarSyr2,869 involve chainCalJac3,169 chainGorGor3,167 chainMm10,167 chainNetCalJac3,172 chainNetGorGor3,170 chainNetMm10,170 chainNetTarSyr2,170 chainTarSyr2,167 netCalJac3,169 netGorGor3,167 netMm10,167 netTarSyr2,167 is chainCalJac3,285 chainCalJac3,305 chainCalJac3,485 chainGorGor3,283 chainGorGor3,303 chainGorGor3,482 chainMm10,283 chainMm10,303 chainMm10,482 chainNetCalJac3,288 chainNetCalJac3,308 chainNetCalJac3,488 chainNetGorGor3,286 chainNetGorGor3,306 chainNetGorGor3,485 chainNetMm10,286 chainNetMm10,306 chainNetMm10,485 chainNetTarSyr2,286 chainNetTarSyr2,306 chainNetTarSyr2,485 chainTarSyr2,283 chainTarSyr2,303 chainTarSyr2,482 cpgIslandExt,56 cpgIslandExt,113 cpgIslandExt,121 cpgIslandExt,130 cpgIslandExt,160 cpgIslandExt,203 cpgIslandExt,321 cpgIslandExt,330 cpgIslandExt,335 cpgIslandExt,347 cpgIslandExt,368 cpgIslandExt,404 cpgIslandExt,494 cpgIslandExtUnmasked,59 cpgIslandExtUnmasked,116 cpgIslandExtUnmasked,124 cpgIslandExtUnmasked,133 cpgIslandExtUnmasked,163 cpgIslandExtUnmasked,206 cpgIslandExtUnmasked,324 cpgIslandExtUnmasked,333 cpgIslandExtUnmasked,338 cpgIslandExtUnmasked,350 cpgIslandExtUnmasked,371 cpgIslandExtUnmasked,407 cpgIslandExtUnmasked,497 cpgIslandSuper,56 cpgIslandSuper,113 cpgIslandSuper,121 cpgIslandSuper,130 cpgIslandSuper,160 cpgIslandSuper,203 cpgIslandSuper,321 cpgIslandSuper,330 cpgIslandSuper,335 cpgIslandSuper,347 cpgIslandSuper,368 cpgIslandSuper,404 cpgIslandSuper,494 ensemblGeneScaffold,66 gap,47 gap,92 gap,99 gap,107 gc5Base,32 gold,46 gold,120 gold,126 microsat,88 mrna,241 mrna,257 mrna,293 mrna,310 nestedRepeats,59 nestedRepeats,123 nestedRepeats,198 nestedRepeats,219 nestedRepeats,337 netCalJac3,285 netCalJac3,305 netCalJac3,485 netGorGor3,283 netGorGor3,303 netGorGor3,482 netMm10,283 netMm10,303 netMm10,482 netTarSyr2,283 netTarSyr2,303 netTarSyr2,482 rmsk,95 rmsk,360 simpleRepeat,28 windowmaskerSdust,25 windowmaskerSdust,39 island cpgIslandExt,343 cpgIslandExtUnmasked,346 cpgIslandSuper,343 islands cpgIslandExt,2 cpgIslandExt,4 cpgIslandExt,5 cpgIslandExt,16 cpgIslandExt,27 cpgIslandExt,148 cpgIslandExt,177 cpgIslandExt,226 cpgIslandExt,320 cpgIslandExt,507 cpgIslandExt,609 cpgIslandExtUnmasked,4 cpgIslandExtUnmasked,8 cpgIslandExtUnmasked,19 cpgIslandExtUnmasked,30 cpgIslandExtUnmasked,151 cpgIslandExtUnmasked,180 cpgIslandExtUnmasked,229 cpgIslandExtUnmasked,323 cpgIslandExtUnmasked,510 cpgIslandExtUnmasked,612 cpgIslandSuper,2 cpgIslandSuper,4 cpgIslandSuper,5 cpgIslandSuper,16 cpgIslandSuper,27 cpgIslandSuper,148 cpgIslandSuper,177 cpgIslandSuper,226 cpgIslandSuper,320 cpgIslandSuper,507 cpgIslandSuper,609 issue mrna,486 mrna,512 xenoRefGene,356 xenoRefGene,390 it chainCalJac3,92 chainCalJac3,284 chainCalJac3,539 chainCalJac3,551 chainGorGor3,90 chainGorGor3,282 chainGorGor3,536 chainGorGor3,548 chainMm10,90 chainMm10,282 chainMm10,536 chainMm10,548 chainNetCalJac3,95 chainNetCalJac3,287 chainNetCalJac3,542 chainNetCalJac3,554 chainNetGorGor3,93 chainNetGorGor3,285 chainNetGorGor3,539 chainNetGorGor3,551 chainNetMm10,93 chainNetMm10,285 chainNetMm10,539 chainNetMm10,551 chainNetTarSyr2,93 chainNetTarSyr2,285 chainNetTarSyr2,539 chainNetTarSyr2,551 chainTarSyr2,90 chainTarSyr2,282 chainTarSyr2,536 chainTarSyr2,548 gap,98 genscan,143 netCalJac3,92 netCalJac3,284 netCalJac3,539 netCalJac3,551 netGorGor3,90 netGorGor3,282 netGorGor3,536 netGorGor3,548 netMm10,90 netMm10,282 netMm10,536 netMm10,548 netTarSyr2,90 netTarSyr2,282 netTarSyr2,536 netTarSyr2,548 item nestedRepeats,197 xenoRefGene,77 items chainCalJac3,503 chainGorGor3,500 chainMm10,500 chainNetCalJac3,506 chainNetGorGor3,503 chainNetMm10,503 chainNetTarSyr2,503 chainTarSyr2,500 ensemblGeneScaffold,28 ensemblGeneScaffold,36 mrna,46 mrna,84 mrna,94 mrna,288 nestedRepeats,171 nestedRepeats,180 netCalJac3,503 netGorGor3,500 netMm10,500 netTarSyr2,500 xenoRefGene,104 its cpgIslandExt,509 cpgIslandExtUnmasked,512 cpgIslandSuper,509 nestedRepeats,204 j cpgIslandExt,613 cpgIslandExtUnmasked,616 cpgIslandSuper,613 ensGene,183 ensemblGeneScaffold,122 genscan,220 mrna,475 mrna,499 nestedRepeats,341 rmsk,364 xenoRefGene,335 jan chainCalJac3,1114 chainGorGor3,1111 chainMm10,1111 chainNetCalJac3,1117 chainNetGorGor3,1114 chainNetMm10,1114 chainNetTarSyr2,1114 chainTarSyr2,1111 ensGene,199 ensemblGeneScaffold,138 microsat,129 mrna,483 mrna,508 netCalJac3,1114 netGorGor3,1111 netMm10,1111 netTarSyr2,1111 simpleRepeat,89 windowmaskerSdust,108 xenoRefGene,353 xenoRefGene,386 jim chainCalJac3,970 chainCalJac3,997 chainCalJac3,1015 chainGorGor3,967 chainGorGor3,994 chainGorGor3,1012 chainMm10,967 chainMm10,994 chainMm10,1012 chainNetCalJac3,973 chainNetCalJac3,1000 chainNetCalJac3,1018 chainNetGorGor3,970 chainNetGorGor3,997 chainNetGorGor3,1015 chainNetMm10,970 chainNetMm10,997 chainNetMm10,1015 chainNetTarSyr2,970 chainNetTarSyr2,997 chainNetTarSyr2,1015 chainTarSyr2,967 chainTarSyr2,994 chainTarSyr2,1012 netCalJac3,970 netCalJac3,997 netCalJac3,1015 netGorGor3,967 netGorGor3,994 netGorGor3,1012 netMm10,967 netMm10,994 netMm10,1012 netTarSyr2,967 netTarSyr2,994 netTarSyr2,1012 joined chainCalJac3,126 chainGorGor3,124 chainMm10,124 chainNetCalJac3,129 chainNetGorGor3,127 chainNetMm10,127 chainNetTarSyr2,127 chainTarSyr2,124 nestedRepeats,7 nestedRepeats,18 nestedRepeats,103 nestedRepeats,128 netCalJac3,126 netGorGor3,124 netMm10,124 netTarSyr2,124 journal nestedRepeats,349 rmsk,372 jul cpgIslandExt,617 cpgIslandExtUnmasked,620 cpgIslandSuper,617 jun gap,15 gold,17 jurka nestedRepeats,62 nestedRepeats,340 rmsk,98 rmsk,363 k augustusGene,268 mrna,469 k1 cpgIslandExt,484 cpgIslandExtUnmasked,487 cpgIslandSuper,484 k2 cpgIslandExt,486 cpgIslandExtUnmasked,489 cpgIslandSuper,486 karlin genscan,148 genscan,209 karsch-mizrachi mrna,470 mrna,494 kasif genscan,193 kd xenoRefGene,321 xenoRefGene,363 kd-tree chainCalJac3,644 chainGorGor3,641 chainMm10,641 chainNetCalJac3,647 chainNetGorGor3,644 chainNetMm10,644 chainNetTarSyr2,644 chainTarSyr2,641 netCalJac3,644 netGorGor3,641 netMm10,641 netTarSyr2,641 kd-trees chainCalJac3,662 chainGorGor3,659 chainMm10,659 chainNetCalJac3,665 chainNetGorGor3,662 chainNetMm10,662 chainNetTarSyr2,662 chainTarSyr2,659 netCalJac3,662 netGorGor3,659 netMm10,659 netTarSyr2,659 keep cpgIslandExt,125 cpgIslandExtUnmasked,128 cpgIslandSuper,125 kent chainCalJac3,971 chainCalJac3,998 chainCalJac3,1016 chainCalJac3,1051 chainCalJac3,1093 chainGorGor3,968 chainGorGor3,995 chainGorGor3,1013 chainGorGor3,1048 chainGorGor3,1090 chainMm10,968 chainMm10,995 chainMm10,1013 chainMm10,1048 chainMm10,1090 chainNetCalJac3,974 chainNetCalJac3,1001 chainNetCalJac3,1019 chainNetCalJac3,1054 chainNetCalJac3,1096 chainNetGorGor3,971 chainNetGorGor3,998 chainNetGorGor3,1016 chainNetGorGor3,1051 chainNetGorGor3,1093 chainNetMm10,971 chainNetMm10,998 chainNetMm10,1016 chainNetMm10,1051 chainNetMm10,1093 chainNetTarSyr2,971 chainNetTarSyr2,998 chainNetTarSyr2,1016 chainNetTarSyr2,1051 chainNetTarSyr2,1093 chainTarSyr2,968 chainTarSyr2,995 chainTarSyr2,1013 chainTarSyr2,1048 chainTarSyr2,1090 mrna,518 netCalJac3,971 netCalJac3,998 netCalJac3,1016 netCalJac3,1051 netCalJac3,1093 netGorGor3,968 netGorGor3,995 netGorGor3,1013 netGorGor3,1048 netGorGor3,1090 netMm10,968 netMm10,995 netMm10,1013 netMm10,1048 netMm10,1090 netTarSyr2,968 netTarSyr2,995 netTarSyr2,1013 netTarSyr2,1048 netTarSyr2,1090 xenoRefGene,303 kept mrna,440 xenoRefGene,279 km xenoRefGene,339 known chainCalJac3,921 chainGorGor3,918 chainMm10,918 chainNetCalJac3,924 chainNetGorGor3,921 chainNetMm10,921 chainNetTarSyr2,921 chainTarSyr2,918 gold,122 netCalJac3,921 netGorGor3,918 netMm10,918 netTarSyr2,918 xenoRefGene,15 l cpgIslandExt,600 cpgIslandExtUnmasked,603 cpgIslandSuper,600 ensGene,179 ensemblGeneScaffold,118 lab augustusGene,252 label genscan,98 xenoRefGene,101 xenoRefGene,113 xenoRefGene,136 labeled nestedRepeats,132 xenoRefGene,106 labels nestedRepeats,161 xenoRefGene,78 landrum xenoRefGene,336 large quality,46 largely chainCalJac3,145 chainGorGor3,143 chainMm10,143 chainNetCalJac3,148 chainNetGorGor3,146 chainNetMm10,146 chainNetTarSyr2,146 chainTarSyr2,143 netCalJac3,145 netGorGor3,143 netMm10,143 netTarSyr2,143 largest chainCalJac3,398 chainGorGor3,395 chainMm10,395 chainNetCalJac3,401 chainNetGorGor3,398 chainNetMm10,398 chainNetTarSyr2,398 chainTarSyr2,395 netCalJac3,398 netGorGor3,395 netMm10,395 netTarSyr2,395 lastz chainCalJac3,596 chainCalJac3,770 chainCalJac3,919 chainGorGor3,593 chainGorGor3,767 chainGorGor3,916 chainMm10,593 chainMm10,767 chainMm10,916 chainNetCalJac3,599 chainNetCalJac3,773 chainNetCalJac3,922 chainNetGorGor3,596 chainNetGorGor3,770 chainNetGorGor3,919 chainNetMm10,596 chainNetMm10,770 chainNetMm10,919 chainNetTarSyr2,596 chainNetTarSyr2,770 chainNetTarSyr2,919 chainTarSyr2,593 chainTarSyr2,767 chainTarSyr2,916 netCalJac3,596 netCalJac3,770 netCalJac3,919 netGorGor3,593 netGorGor3,767 netGorGor3,916 netMm10,593 netMm10,767 netMm10,916 netTarSyr2,593 netTarSyr2,767 netTarSyr2,916 lavtoaxt chainCalJac3,614 chainGorGor3,611 chainMm10,611 chainNetCalJac3,617 chainNetGorGor3,614 chainNetMm10,614 chainNetTarSyr2,614 chainTarSyr2,611 netCalJac3,614 netGorGor3,611 netMm10,611 netTarSyr2,611 least microsat,29 microsat,78 mrna,431 xenoRefGene,270 lemur chainCalJac3,75 chainCalJac3,102 chainCalJac3,160 chainCalJac3,207 chainCalJac3,274 chainCalJac3,282 chainCalJac3,583 chainCalJac3,636 chainGorGor3,73 chainGorGor3,100 chainGorGor3,158 chainGorGor3,205 chainGorGor3,272 chainGorGor3,280 chainGorGor3,580 chainGorGor3,633 chainMm10,73 chainMm10,100 chainMm10,158 chainMm10,205 chainMm10,272 chainMm10,280 chainMm10,580 chainMm10,633 chainNetCalJac3,78 chainNetCalJac3,105 chainNetCalJac3,163 chainNetCalJac3,210 chainNetCalJac3,277 chainNetCalJac3,285 chainNetCalJac3,586 chainNetCalJac3,639 chainNetGorGor3,76 chainNetGorGor3,103 chainNetGorGor3,161 chainNetGorGor3,208 chainNetGorGor3,275 chainNetGorGor3,283 chainNetGorGor3,583 chainNetGorGor3,636 chainNetMm10,76 chainNetMm10,103 chainNetMm10,161 chainNetMm10,208 chainNetMm10,275 chainNetMm10,283 chainNetMm10,583 chainNetMm10,636 chainNetTarSyr2,76 chainNetTarSyr2,103 chainNetTarSyr2,161 chainNetTarSyr2,208 chainNetTarSyr2,275 chainNetTarSyr2,283 chainNetTarSyr2,583 chainNetTarSyr2,636 chainTarSyr2,73 chainTarSyr2,100 chainTarSyr2,158 chainTarSyr2,205 chainTarSyr2,272 chainTarSyr2,280 chainTarSyr2,580 chainTarSyr2,633 gap,18 gold,20 mrna,2 mrna,5 mrna,20 mrna,389 netCalJac3,75 netCalJac3,102 netCalJac3,160 netCalJac3,207 netCalJac3,274 netCalJac3,282 netCalJac3,583 netCalJac3,636 netGorGor3,73 netGorGor3,100 netGorGor3,158 netGorGor3,205 netGorGor3,272 netGorGor3,280 netGorGor3,580 netGorGor3,633 netMm10,73 netMm10,100 netMm10,158 netMm10,205 netMm10,272 netMm10,280 netMm10,580 netMm10,633 netTarSyr2,73 netTarSyr2,100 netTarSyr2,158 netTarSyr2,205 netTarSyr2,272 netTarSyr2,280 netTarSyr2,580 netTarSyr2,633 quality,4 quality,96 xenoRefGene,4 xenoRefGene,25 xenoRefGene,225 length augustusGene,82 cpgIslandExt,268 cpgIslandExt,360 cpgIslandExt,395 cpgIslandExtUnmasked,271 cpgIslandExtUnmasked,363 cpgIslandExtUnmasked,398 cpgIslandSuper,268 cpgIslandSuper,360 cpgIslandSuper,395 genscan,39 less xenoRefGene,234 level chainCalJac3,393 chainCalJac3,427 chainCalJac3,432 chainCalJac3,439 chainCalJac3,497 chainCalJac3,524 chainCalJac3,537 chainCalJac3,569 chainGorGor3,390 chainGorGor3,424 chainGorGor3,429 chainGorGor3,436 chainGorGor3,494 chainGorGor3,521 chainGorGor3,534 chainGorGor3,566 chainMm10,390 chainMm10,424 chainMm10,429 chainMm10,436 chainMm10,494 chainMm10,521 chainMm10,534 chainMm10,566 chainNetCalJac3,396 chainNetCalJac3,430 chainNetCalJac3,435 chainNetCalJac3,442 chainNetCalJac3,500 chainNetCalJac3,527 chainNetCalJac3,540 chainNetCalJac3,572 chainNetGorGor3,393 chainNetGorGor3,427 chainNetGorGor3,432 chainNetGorGor3,439 chainNetGorGor3,497 chainNetGorGor3,524 chainNetGorGor3,537 chainNetGorGor3,569 chainNetMm10,393 chainNetMm10,427 chainNetMm10,432 chainNetMm10,439 chainNetMm10,497 chainNetMm10,524 chainNetMm10,537 chainNetMm10,569 chainNetTarSyr2,393 chainNetTarSyr2,427 chainNetTarSyr2,432 chainNetTarSyr2,439 chainNetTarSyr2,497 chainNetTarSyr2,524 chainNetTarSyr2,537 chainNetTarSyr2,569 chainTarSyr2,390 chainTarSyr2,424 chainTarSyr2,429 chainTarSyr2,436 chainTarSyr2,494 chainTarSyr2,521 chainTarSyr2,534 chainTarSyr2,566 mrna,423 netCalJac3,393 netCalJac3,427 netCalJac3,432 netCalJac3,439 netCalJac3,497 netCalJac3,524 netCalJac3,537 netCalJac3,569 netGorGor3,390 netGorGor3,424 netGorGor3,429 netGorGor3,436 netGorGor3,494 netGorGor3,521 netGorGor3,534 netGorGor3,566 netMm10,390 netMm10,424 netMm10,429 netMm10,436 netMm10,494 netMm10,521 netMm10,534 netMm10,566 netTarSyr2,390 netTarSyr2,424 netTarSyr2,429 netTarSyr2,436 netTarSyr2,494 netTarSyr2,521 netTarSyr2,534 netTarSyr2,566 rmsk,205 xenoRefGene,62 xenoRefGene,262 levels cpgIslandExt,158 cpgIslandExtUnmasked,161 cpgIslandSuper,158 libraries nestedRepeats,258 nestedRepeats,317 rmsk,340 library nestedRepeats,47 rmsk,83 light cpgIslandExt,9 cpgIslandExtUnmasked,12 cpgIslandSuper,9 xenoRefGene,71 lighter rmsk,237 like chainCalJac3,48 chainCalJac3,56 chainGorGor3,47 chainGorGor3,55 chainMm10,47 chainMm10,55 chainNetCalJac3,51 chainNetCalJac3,59 chainNetGorGor3,50 chainNetGorGor3,58 chainNetMm10,50 chainNetMm10,58 chainNetTarSyr2,50 chainNetTarSyr2,58 chainTarSyr2,47 chainTarSyr2,55 ensGene,148 netCalJac3,48 netCalJac3,56 netGorGor3,47 netGorGor3,55 netMm10,47 netMm10,55 netTarSyr2,47 netTarSyr2,55 likely augustusGene,111 microsat,17 line chainCalJac3,475 chainGorGor3,472 chainMm10,472 chainNetCalJac3,478 chainNetGorGor3,475 chainNetMm10,475 chainNetTarSyr2,475 chainTarSyr2,472 gap,106 gold,125 nestedRepeats,151 netCalJac3,475 netGorGor3,472 netMm10,472 netTarSyr2,472 rmsk,165 line-up chainCalJac3,542 chainGorGor3,539 chainMm10,539 chainNetCalJac3,545 chainNetGorGor3,542 chainNetMm10,542 chainNetTarSyr2,542 chainTarSyr2,539 netCalJac3,542 netGorGor3,539 netMm10,539 netTarSyr2,539 line-ups chainCalJac3,527 chainGorGor3,524 chainMm10,524 chainNetCalJac3,530 chainNetGorGor3,527 chainNetMm10,527 chainNetTarSyr2,527 chainTarSyr2,524 netCalJac3,527 netGorGor3,524 netMm10,524 netTarSyr2,524 lineage-specific chainCalJac3,945 chainGorGor3,942 chainMm10,942 chainNetCalJac3,948 chainNetGorGor3,945 chainNetMm10,945 chainNetTarSyr2,945 chainTarSyr2,942 netCalJac3,945 netGorGor3,942 netMm10,942 netTarSyr2,942 linear chainCalJac3,704 chainGorGor3,701 chainMm10,701 chainNetCalJac3,707 chainNetGorGor3,704 chainNetMm10,704 chainNetTarSyr2,704 chainTarSyr2,701 ensemblGeneScaffold,48 netCalJac3,704 netGorGor3,701 netMm10,701 netTarSyr2,701 lineargap chainCalJac3,710 chainGorGor3,707 chainMm10,707 chainNetCalJac3,713 chainNetGorGor3,710 chainNetMm10,710 chainNetTarSyr2,710 chainTarSyr2,707 netCalJac3,710 netGorGor3,707 netMm10,707 netTarSyr2,707 lines chainCalJac3,133 chainCalJac3,140 chainCalJac3,163 chainCalJac3,455 chainGorGor3,131 chainGorGor3,138 chainGorGor3,161 chainGorGor3,452 chainMm10,131 chainMm10,138 chainMm10,161 chainMm10,452 chainNetCalJac3,136 chainNetCalJac3,143 chainNetCalJac3,166 chainNetCalJac3,458 chainNetGorGor3,134 chainNetGorGor3,141 chainNetGorGor3,164 chainNetGorGor3,455 chainNetMm10,134 chainNetMm10,141 chainNetMm10,164 chainNetMm10,455 chainNetTarSyr2,134 chainNetTarSyr2,141 chainNetTarSyr2,164 chainNetTarSyr2,455 chainTarSyr2,131 chainTarSyr2,138 chainTarSyr2,161 chainTarSyr2,452 nestedRepeats,131 netCalJac3,133 netCalJac3,140 netCalJac3,163 netCalJac3,455 netGorGor3,131 netGorGor3,138 netGorGor3,161 netGorGor3,452 netMm10,131 netMm10,138 netMm10,161 netMm10,452 netTarSyr2,131 netTarSyr2,138 netTarSyr2,161 netTarSyr2,452 link gc5Base,63 quality,77 linux.x86_64 cpgIslandExt,579 cpgIslandExtUnmasked,582 cpgIslandSuper,579 lipman mrna,472 mrna,496 list mrna,158 listed ensGene,49 loaded windowmaskerSdust,79 local chainCalJac3,113 chainCalJac3,185 chainGorGor3,111 chainGorGor3,183 chainMm10,111 chainMm10,183 chainNetCalJac3,116 chainNetCalJac3,188 chainNetGorGor3,114 chainNetGorGor3,186 chainNetMm10,114 chainNetMm10,186 chainNetTarSyr2,114 chainNetTarSyr2,186 chainTarSyr2,111 chainTarSyr2,183 ensGene,73 nestedRepeats,98 netCalJac3,113 netCalJac3,185 netGorGor3,111 netGorGor3,183 netMm10,111 netMm10,183 netTarSyr2,111 netTarSyr2,183 located simpleRepeat,21 location chainCalJac3,254 chainGorGor3,252 chainMm10,252 chainNetCalJac3,257 chainNetGorGor3,255 chainNetMm10,255 chainNetTarSyr2,255 chainTarSyr2,252 netCalJac3,254 netGorGor3,252 netMm10,252 netTarSyr2,252 locations gap,3 logic mrna,236 long rmsk,161 rmsk,166 longer chainCalJac3,84 chainGorGor3,82 chainMm10,82 chainNetCalJac3,87 chainNetGorGor3,85 chainNetMm10,85 chainNetTarSyr2,85 chainTarSyr2,82 netCalJac3,84 netGorGor3,82 netMm10,82 netTarSyr2,82 longest chainCalJac3,520 chainGorGor3,517 chainMm10,517 chainNetCalJac3,523 chainNetGorGor3,520 chainNetMm10,520 chainNetTarSyr2,520 chainTarSyr2,517 netCalJac3,520 netGorGor3,517 netMm10,517 netTarSyr2,517 look chainCalJac3,47 chainGorGor3,46 chainMm10,46 chainNetCalJac3,50 chainNetGorGor3,49 chainNetMm10,49 chainNetTarSyr2,49 chainTarSyr2,46 netCalJac3,47 netGorGor3,46 netMm10,46 netTarSyr2,46 low nestedRepeats,39 rmsk,29 rmsk,181 lower chainCalJac3,496 chainGorGor3,493 chainMm10,493 chainNetCalJac3,499 chainNetGorGor3,496 chainNetMm10,496 chainNetTarSyr2,496 chainTarSyr2,493 netCalJac3,496 netGorGor3,493 netMm10,493 netTarSyr2,493 lower-level chainCalJac3,861 chainCalJac3,867 chainGorGor3,858 chainGorGor3,864 chainMm10,858 chainMm10,864 chainNetCalJac3,864 chainNetCalJac3,870 chainNetGorGor3,861 chainNetGorGor3,867 chainNetMm10,861 chainNetMm10,867 chainNetTarSyr2,861 chainNetTarSyr2,867 chainTarSyr2,858 chainTarSyr2,864 netCalJac3,861 netCalJac3,867 netGorGor3,858 netGorGor3,864 netMm10,858 netMm10,864 netTarSyr2,858 netTarSyr2,864 ltr rmsk,170 m augustusGene,287 augustusGene,289 augustusGene,317 cpgIslandExt,605 cpgIslandExt,607 cpgIslandExtUnmasked,608 cpgIslandExtUnmasked,610 cpgIslandSuper,605 cpgIslandSuper,607 mrna,467 made rmsk,110 maglott xenoRefGene,366 make gold,76 rmsk,123 makedb rmsk,131 mammalian nestedRepeats,368 nestedRepeats,382 rmsk,391 rmsk,405 xenoRefGene,346 many chainCalJac3,406 chainGorGor3,403 chainMm10,403 chainNetCalJac3,409 chainNetGorGor3,406 chainNetMm10,406 chainNetTarSyr2,406 chainTarSyr2,403 mrna,93 netCalJac3,406 netGorGor3,403 netMm10,403 netTarSyr2,403 map chainCalJac3,334 chainGorGor3,331 chainMm10,331 chainNetCalJac3,337 chainNetGorGor3,334 chainNetMm10,334 chainNetTarSyr2,334 chainTarSyr2,331 ensemblGeneScaffold,46 netCalJac3,334 netGorGor3,331 netMm10,331 netTarSyr2,331 mapped augustusGene,298 nestedRepeats,233 mapping cytoBandIdeo,7 ensemblGeneScaffold,7 ensemblGeneScaffold,15 gap,4 gc5Base,8 gold,5 quality,8 mar augustusGene,309 march chainCalJac3,4 chainCalJac3,67 chainCalJac3,308 chainNetCalJac3,5 chainNetCalJac3,70 chainNetCalJac3,311 chainNetCalJac3Viewchain,3 chainNetCalJac3Viewnet,3 netCalJac3,4 netCalJac3,67 netCalJac3,308 mario augustusGene,102 augustusGene,283 markers microsat,23 markov augustusGene,325 marmoset chainCalJac3,1 chainCalJac3,3 chainCalJac3,66 chainCalJac3,99 chainCalJac3,152 chainCalJac3,272 chainCalJac3,299 chainCalJac3,581 chainCalJac3,630 chainNetCalJac3,1 chainNetCalJac3,4 chainNetCalJac3,69 chainNetCalJac3,102 chainNetCalJac3,155 chainNetCalJac3,275 chainNetCalJac3,302 chainNetCalJac3,584 chainNetCalJac3,633 chainNetCalJac3Viewchain,2 chainNetCalJac3Viewnet,2 netCalJac3,1 netCalJac3,3 netCalJac3,66 netCalJac3,99 netCalJac3,152 netCalJac3,272 netCalJac3,299 netCalJac3,581 netCalJac3,630 masked cpgIslandExt,192 cpgIslandExt,198 cpgIslandExt,328 cpgIslandExtUnmasked,195 cpgIslandExtUnmasked,201 cpgIslandExtUnmasked,331 cpgIslandSuper,192 cpgIslandSuper,198 cpgIslandSuper,328 rmsk,71 windowmaskerSdust,5 windowmaskerSdust,16 masker windowmaskerSdust,102 masking cpgIslandExt,304 cpgIslandExtUnmasked,307 cpgIslandSuper,304 maskoutfa cpgIslandExt,414 cpgIslandExtUnmasked,417 cpgIslandSuper,414 match chainCalJac3,259 chainCalJac3,521 chainCalJac3,559 chainGorGor3,257 chainGorGor3,518 chainGorGor3,556 chainMm10,257 chainMm10,518 chainMm10,556 chainNetCalJac3,262 chainNetCalJac3,524 chainNetCalJac3,562 chainNetGorGor3,260 chainNetGorGor3,521 chainNetGorGor3,559 chainNetMm10,260 chainNetMm10,521 chainNetMm10,559 chainNetTarSyr2,260 chainNetTarSyr2,521 chainNetTarSyr2,559 chainTarSyr2,257 chainTarSyr2,518 chainTarSyr2,556 mrna,246 mrna,261 mrna,302 mrna,320 netCalJac3,259 netCalJac3,521 netCalJac3,559 netGorGor3,257 netGorGor3,518 netGorGor3,556 netMm10,257 netMm10,518 netMm10,556 netTarSyr2,257 netTarSyr2,518 netTarSyr2,556 matches mrna,53 matching chainCalJac3,262 chainGorGor3,260 chainMm10,260 chainNetCalJac3,265 chainNetGorGor3,263 chainNetMm10,263 chainNetTarSyr2,263 chainTarSyr2,260 netCalJac3,262 netGorGor3,260 netMm10,260 netTarSyr2,260 matrix chainCalJac3,674 chainCalJac3,706 chainGorGor3,671 chainGorGor3,703 chainMm10,671 chainMm10,703 chainNetCalJac3,677 chainNetCalJac3,709 chainNetGorGor3,674 chainNetGorGor3,706 chainNetMm10,674 chainNetMm10,706 chainNetTarSyr2,674 chainNetTarSyr2,706 chainTarSyr2,671 chainTarSyr2,703 netCalJac3,674 netCalJac3,706 netGorGor3,671 netGorGor3,703 netMm10,671 netMm10,703 netTarSyr2,671 netTarSyr2,703 maximally chainCalJac3,666 chainGorGor3,663 chainMm10,663 chainNetCalJac3,669 chainNetGorGor3,666 chainNetMm10,666 chainNetTarSyr2,666 chainTarSyr2,663 cpgIslandExt,250 cpgIslandExtUnmasked,253 cpgIslandSuper,250 netCalJac3,666 netGorGor3,663 netMm10,663 netTarSyr2,663 maxtracks augustusGene,139 may chainCalJac3,176 chainCalJac3,435 chainGorGor3,4 chainGorGor3,66 chainGorGor3,174 chainGorGor3,306 chainGorGor3,432 chainMm10,174 chainMm10,432 chainNetCalJac3,179 chainNetCalJac3,438 chainNetGorGor3,5 chainNetGorGor3,69 chainNetGorGor3,177 chainNetGorGor3,309 chainNetGorGor3,435 chainNetGorGor3Viewchain,3 chainNetGorGor3Viewnet,3 chainNetMm10,177 chainNetMm10,435 chainNetTarSyr2,177 chainNetTarSyr2,435 chainTarSyr2,174 chainTarSyr2,432 cpgIslandExt,36 cpgIslandExtUnmasked,39 cpgIslandSuper,36 gc5Base,40 mrna,89 mrna,208 mrna,218 mrna,326 mrna,370 nestedRepeats,268 nestedRepeats,290 netCalJac3,176 netCalJac3,435 netGorGor3,4 netGorGor3,66 netGorGor3,174 netGorGor3,306 netGorGor3,432 netMm10,174 netMm10,432 netTarSyr2,174 netTarSyr2,432 quality,56 rmsk,297 rmsk,307 simpleRepeat,43 mcgarvey xenoRefGene,338 medium chainCalJac3,711 chainGorGor3,708 chainMm10,708 chainNetCalJac3,714 chainNetGorGor3,711 chainNetMm10,711 chainNetTarSyr2,711 chainTarSyr2,708 netCalJac3,711 netGorGor3,708 netMm10,708 netTarSyr2,708 xenoRefGene,73 mellifera augustusGene,216 mementos nestedRepeats,377 rmsk,400 menu xenoRefGene,174 method ensGene,120 methods augustusGene,46 chainCalJac3,571 chainCalJac3,774 chainGorGor3,568 chainGorGor3,771 chainMm10,568 chainMm10,771 chainNetCalJac3,574 chainNetCalJac3,777 chainNetGorGor3,571 chainNetGorGor3,774 chainNetMm10,571 chainNetMm10,774 chainNetTarSyr2,571 chainNetTarSyr2,774 chainTarSyr2,568 chainTarSyr2,771 cpgIslandExt,224 cpgIslandExtUnmasked,227 cpgIslandSuper,224 ensGene,29 ensGene,35 ensemblGeneScaffold,63 ensemblGeneScaffold,81 genscan,130 genscan,197 microsat,45 mrna,386 nestedRepeats,244 netCalJac3,571 netCalJac3,774 netGorGor3,568 netGorGor3,771 netMm10,568 netMm10,771 netTarSyr2,568 netTarSyr2,771 rmsk,286 simpleRepeat,55 windowmaskerSdust,46 xenoRefGene,217 methylated cpgIslandExt,71 cpgIslandExt,100 cpgIslandExt,132 cpgIslandExtUnmasked,74 cpgIslandExtUnmasked,103 cpgIslandExtUnmasked,135 cpgIslandSuper,71 cpgIslandSuper,100 cpgIslandSuper,132 methylation cpgIslandExt,73 cpgIslandExtUnmasked,76 cpgIslandSuper,73 micmur1 ensGene,80 micmur1.fa windowmaskerSdust,62 windowmaskerSdust,71 micro-satellites rmsk,180 microsatellite microsat,1 microsat,22 microsatellites microsat,2 miklem cpgIslandExt,598 cpgIslandExtUnmasked,601 cpgIslandSuper,598 miller chainCalJac3,939 chainCalJac3,976 chainCalJac3,1037 chainCalJac3,1057 chainCalJac3,1105 chainGorGor3,936 chainGorGor3,973 chainGorGor3,1034 chainGorGor3,1054 chainGorGor3,1102 chainMm10,936 chainMm10,973 chainMm10,1034 chainMm10,1054 chainMm10,1102 chainNetCalJac3,942 chainNetCalJac3,979 chainNetCalJac3,1040 chainNetCalJac3,1060 chainNetCalJac3,1108 chainNetGorGor3,939 chainNetGorGor3,976 chainNetGorGor3,1037 chainNetGorGor3,1057 chainNetGorGor3,1105 chainNetMm10,939 chainNetMm10,976 chainNetMm10,1037 chainNetMm10,1057 chainNetMm10,1105 chainNetTarSyr2,939 chainNetTarSyr2,976 chainNetTarSyr2,1037 chainNetTarSyr2,1057 chainNetTarSyr2,1105 chainTarSyr2,936 chainTarSyr2,973 chainTarSyr2,1034 chainTarSyr2,1054 chainTarSyr2,1102 netCalJac3,939 netCalJac3,976 netCalJac3,1037 netCalJac3,1057 netCalJac3,1105 netGorGor3,936 netGorGor3,973 netGorGor3,1034 netGorGor3,1054 netGorGor3,1102 netMm10,936 netMm10,973 netMm10,1034 netMm10,1054 netMm10,1102 netTarSyr2,936 netTarSyr2,973 netTarSyr2,1034 netTarSyr2,1054 netTarSyr2,1102 minexonintronprob augustusGene,135 minimum chainCalJac3,687 chainGorGor3,684 chainMm10,684 chainNetCalJac3,690 chainNetGorGor3,687 chainNetMm10,687 chainNetTarSyr2,687 chainTarSyr2,684 netCalJac3,687 netGorGor3,684 netMm10,684 netTarSyr2,684 minmeanexonintronprob augustusGene,137 minmei chainCalJac3,931 chainGorGor3,928 chainMm10,928 chainNetCalJac3,934 chainNetGorGor3,931 chainNetMm10,931 chainNetTarSyr2,931 chainTarSyr2,928 netCalJac3,931 netGorGor3,928 netMm10,928 netTarSyr2,928 mismatch rmsk,218 mj xenoRefGene,337 mk_counts windowmaskerSdust,59 mm10 chainMm10,7 chainMm10,69 chainMm10,309 chainNetMm10,8 chainNetMm10,72 chainNetMm10,312 chainNetMm10Viewchain,6 chainNetMm10Viewnet,6 netMm10,7 netMm10,69 netMm10,309 mode chainCalJac3,390 chainGorGor3,387 chainMm10,387 chainNetCalJac3,393 chainNetGorGor3,390 chainNetMm10,390 chainNetTarSyr2,390 chainTarSyr2,387 gold,69 mrna,44 mrna,74 nestedRepeats,119 nestedRepeats,160 nestedRepeats,169 netCalJac3,390 netGorGor3,387 netMm10,387 netTarSyr2,387 rmsk,142 model augustusGene,121 augustusGene,326 genscan,140 modeling genscan,182 models augustusGene,49 augustusGene,65 augustusGene,97 augustusGene,145 augustusGene,178 genscan,158 modes chainCalJac3,244 chainGorGor3,242 chainMm10,242 chainNetCalJac3,247 chainNetGorGor3,245 chainNetMm10,245 chainNetTarSyr2,245 chainTarSyr2,242 netCalJac3,244 netGorGor3,242 netMm10,242 netTarSyr2,242 modification cpgIslandExt,591 cpgIslandExtUnmasked,594 cpgIslandSuper,591 modified rmsk,57 mol cpgIslandExt,614 cpgIslandExtUnmasked,617 cpgIslandSuper,614 genscan,221 molecular genscan,199 more augustusGene,35 chainCalJac3,165 chainCalJac3,226 chainGorGor3,163 chainGorGor3,224 chainMm10,163 chainMm10,224 chainNetCalJac3,168 chainNetCalJac3,229 chainNetGorGor3,166 chainNetGorGor3,227 chainNetMm10,166 chainNetMm10,227 chainNetTarSyr2,166 chainNetTarSyr2,227 chainTarSyr2,163 chainTarSyr2,224 cpgIslandExt,541 cpgIslandExtUnmasked,544 cpgIslandSuper,541 ensGene,18 ensGene,158 genscan,50 genscan,125 genscan,163 microsat,96 mrna,49 mrna,121 mrna,228 mrna,349 mrna,375 nestedRepeats,211 nestedRepeats,300 netCalJac3,165 netCalJac3,226 netGorGor3,163 netGorGor3,224 netMm10,163 netMm10,224 netTarSyr2,163 netTarSyr2,224 rmsk,323 simpleRepeat,57 xenoRefGene,176 morgulis windowmaskerSdust,90 most augustusGene,93 augustusGene,110 nestedRepeats,249 mouse chainCalJac3,74 chainCalJac3,101 chainCalJac3,159 chainCalJac3,206 chainCalJac3,273 chainCalJac3,281 chainCalJac3,582 chainCalJac3,635 chainCalJac3,1070 chainGorGor3,72 chainGorGor3,99 chainGorGor3,157 chainGorGor3,204 chainGorGor3,271 chainGorGor3,279 chainGorGor3,579 chainGorGor3,632 chainGorGor3,1067 chainMm10,1 chainMm10,3 chainMm10,65 chainMm10,72 chainMm10,97 chainMm10,99 chainMm10,150 chainMm10,157 chainMm10,204 chainMm10,270 chainMm10,271 chainMm10,279 chainMm10,297 chainMm10,578 chainMm10,579 chainMm10,627 chainMm10,632 chainMm10,1067 chainNetCalJac3,77 chainNetCalJac3,104 chainNetCalJac3,162 chainNetCalJac3,209 chainNetCalJac3,276 chainNetCalJac3,284 chainNetCalJac3,585 chainNetCalJac3,638 chainNetCalJac3,1073 chainNetGorGor3,75 chainNetGorGor3,102 chainNetGorGor3,160 chainNetGorGor3,207 chainNetGorGor3,274 chainNetGorGor3,282 chainNetGorGor3,582 chainNetGorGor3,635 chainNetGorGor3,1070 chainNetMm10,1 chainNetMm10,4 chainNetMm10,68 chainNetMm10,75 chainNetMm10,100 chainNetMm10,102 chainNetMm10,153 chainNetMm10,160 chainNetMm10,207 chainNetMm10,273 chainNetMm10,274 chainNetMm10,282 chainNetMm10,300 chainNetMm10,581 chainNetMm10,582 chainNetMm10,630 chainNetMm10,635 chainNetMm10,1070 chainNetMm10Viewchain,2 chainNetMm10Viewnet,2 chainNetTarSyr2,75 chainNetTarSyr2,102 chainNetTarSyr2,160 chainNetTarSyr2,207 chainNetTarSyr2,274 chainNetTarSyr2,282 chainNetTarSyr2,582 chainNetTarSyr2,635 chainNetTarSyr2,1070 chainTarSyr2,72 chainTarSyr2,99 chainTarSyr2,157 chainTarSyr2,204 chainTarSyr2,271 chainTarSyr2,279 chainTarSyr2,579 chainTarSyr2,632 chainTarSyr2,1067 gap,17 gold,19 mrna,1 mrna,4 mrna,19 mrna,388 netCalJac3,74 netCalJac3,101 netCalJac3,159 netCalJac3,206 netCalJac3,273 netCalJac3,281 netCalJac3,582 netCalJac3,635 netCalJac3,1070 netGorGor3,72 netGorGor3,99 netGorGor3,157 netGorGor3,204 netGorGor3,271 netGorGor3,279 netGorGor3,579 netGorGor3,632 netGorGor3,1067 netMm10,1 netMm10,3 netMm10,65 netMm10,72 netMm10,97 netMm10,99 netMm10,150 netMm10,157 netMm10,204 netMm10,270 netMm10,271 netMm10,279 netMm10,297 netMm10,578 netMm10,579 netMm10,627 netMm10,632 netMm10,1067 netTarSyr2,72 netTarSyr2,99 netTarSyr2,157 netTarSyr2,204 netTarSyr2,271 netTarSyr2,279 netTarSyr2,579 netTarSyr2,632 netTarSyr2,1067 quality,3 quality,95 xenoRefGene,24 xenoRefGene,224 mrna mrna,9 mrna,14 mrna,129 mrna,403 mrna,443 mrna,450 mrnas mrna,3 mrna,6 mrna,21 mrna,139 mrna,244 mrna,259 mrna,300 mrna,318 mrna,343 mrna,390 much chainCalJac3,888 chainCalJac3,905 chainGorGor3,885 chainGorGor3,902 chainMm10,885 chainMm10,902 chainNetCalJac3,891 chainNetCalJac3,908 chainNetGorGor3,888 chainNetGorGor3,905 chainNetMm10,888 chainNetMm10,905 chainNetTarSyr2,888 chainNetTarSyr2,905 chainTarSyr2,885 chainTarSyr2,902 nestedRepeats,210 netCalJac3,888 netCalJac3,905 netGorGor3,885 netGorGor3,902 netMm10,885 netMm10,902 netTarSyr2,885 netTarSyr2,902 multiple chainCalJac3,197 chainGorGor3,195 chainMm10,195 chainNetCalJac3,200 chainNetGorGor3,198 chainNetMm10,198 chainNetTarSyr2,198 chainTarSyr2,195 mrna,206 mrna,406 netCalJac3,197 netGorGor3,195 netMm10,195 netTarSyr2,195 xenoRefGene,245 mutation chainCalJac3,186 chainGorGor3,184 chainMm10,184 chainNetCalJac3,189 chainNetGorGor3,187 chainNetMm10,187 chainNetTarSyr2,187 chainTarSyr2,184 netCalJac3,186 netGorGor3,184 netMm10,184 netTarSyr2,184 mysql cpgIslandExt,538 cpgIslandExtUnmasked,541 cpgIslandSuper,538 ensGene,115 ensGene,125 ensemblGeneScaffold,71 n cpgIslandExt,386 cpgIslandExt,394 cpgIslandExt,456 cpgIslandExtUnmasked,389 cpgIslandExtUnmasked,397 cpgIslandExtUnmasked,459 cpgIslandSuper,386 cpgIslandSuper,394 cpgIslandSuper,456 name chainCalJac3,372 chainGorGor3,369 chainMm10,369 chainNetCalJac3,375 chainNetGorGor3,372 chainNetMm10,372 chainNetTarSyr2,372 chainTarSyr2,369 mrna,147 nestedRepeats,136 netCalJac3,372 netGorGor3,369 netMm10,369 netTarSyr2,369 xenoRefGene,109 xenoRefGene,119 xenoRefGene,124 names chainCalJac3,248 chainGorGor3,246 chainMm10,246 chainNetCalJac3,251 chainNetGorGor3,249 chainNetMm10,249 chainNetTarSyr2,249 chainTarSyr2,246 netCalJac3,248 netGorGor3,246 netMm10,246 netTarSyr2,246 xenoRefGene,131 native augustusGene,295 natl chainCalJac3,1075 chainGorGor3,1072 chainMm10,1072 chainNetCalJac3,1078 chainNetGorGor3,1075 chainNetMm10,1075 chainNetTarSyr2,1075 chainTarSyr2,1072 netCalJac3,1075 netGorGor3,1072 netMm10,1072 netTarSyr2,1072 natural chainCalJac3,826 chainGorGor3,823 chainMm10,823 chainNetCalJac3,829 chainNetGorGor3,826 chainNetMm10,826 chainNetTarSyr2,826 chainTarSyr2,823 netCalJac3,826 netGorGor3,823 netMm10,823 netTarSyr2,823 nbsp chainCalJac3,677 chainGorGor3,674 chainMm10,674 chainNetCalJac3,680 chainNetGorGor3,677 chainNetMm10,677 chainNetTarSyr2,677 chainTarSyr2,674 netCalJac3,677 netGorGor3,674 netMm10,674 netTarSyr2,674 ncbi gap,28 gap,31 gap,57 gold,30 gold,33 gold,56 windowmaskerSdust,29 windowmaskerSdust,43 xenoRefGene,29 xenoRefGene,299 xenoRefGene,368 near cpgIslandExt,31 cpgIslandExtUnmasked,34 cpgIslandSuper,31 necessary chainCalJac3,810 chainGorGor3,807 chainMm10,807 chainNetCalJac3,813 chainNetGorGor3,810 chainNetMm10,810 chainNetTarSyr2,810 chainTarSyr2,807 netCalJac3,810 netGorGor3,807 netMm10,807 netTarSyr2,807 nematodes augustusGene,211 net chainCalJac3,35 chainCalJac3,264 chainCalJac3,267 chainCalJac3,385 chainCalJac3,764 chainGorGor3,34 chainGorGor3,262 chainGorGor3,265 chainGorGor3,382 chainGorGor3,761 chainMm10,34 chainMm10,262 chainMm10,265 chainMm10,382 chainMm10,761 chainNetCalJac3,3 chainNetCalJac3,12 chainNetCalJac3,38 chainNetCalJac3,267 chainNetCalJac3,270 chainNetCalJac3,388 chainNetCalJac3,767 chainNetCalJac3Viewchain,10 chainNetCalJac3Viewnet,1 chainNetCalJac3Viewnet,10 chainNetGorGor3,3 chainNetGorGor3,11 chainNetGorGor3,37 chainNetGorGor3,265 chainNetGorGor3,268 chainNetGorGor3,385 chainNetGorGor3,764 chainNetGorGor3Viewchain,9 chainNetGorGor3Viewnet,1 chainNetGorGor3Viewnet,9 chainNetMm10,3 chainNetMm10,11 chainNetMm10,37 chainNetMm10,265 chainNetMm10,268 chainNetMm10,385 chainNetMm10,764 chainNetMm10Viewchain,9 chainNetMm10Viewnet,1 chainNetMm10Viewnet,9 chainNetTarSyr2,3 chainNetTarSyr2,11 chainNetTarSyr2,37 chainNetTarSyr2,265 chainNetTarSyr2,268 chainNetTarSyr2,385 chainNetTarSyr2,764 chainNetTarSyr2Viewchain,9 chainNetTarSyr2Viewnet,1 chainNetTarSyr2Viewnet,9 chainTarSyr2,34 chainTarSyr2,262 chainTarSyr2,265 chainTarSyr2,382 chainTarSyr2,761 netCalJac3,2 netCalJac3,10 netCalJac3,35 netCalJac3,264 netCalJac3,267 netCalJac3,385 netCalJac3,764 netGorGor3,2 netGorGor3,9 netGorGor3,34 netGorGor3,262 netGorGor3,265 netGorGor3,382 netGorGor3,761 netMm10,2 netMm10,9 netMm10,34 netMm10,262 netMm10,265 netMm10,382 netMm10,761 netTarSyr2,2 netTarSyr2,9 netTarSyr2,34 netTarSyr2,262 netTarSyr2,265 netTarSyr2,382 netTarSyr2,761 netclass chainCalJac3,880 chainCalJac3,1003 chainGorGor3,877 chainGorGor3,1000 chainMm10,877 chainMm10,1000 chainNetCalJac3,883 chainNetCalJac3,1006 chainNetGorGor3,880 chainNetGorGor3,1003 chainNetMm10,880 chainNetMm10,1003 chainNetTarSyr2,880 chainNetTarSyr2,1003 chainTarSyr2,877 chainTarSyr2,1000 netCalJac3,880 netCalJac3,1003 netGorGor3,877 netGorGor3,1000 netMm10,877 netMm10,1000 netTarSyr2,877 netTarSyr2,1000 nets chainCalJac3,990 chainGorGor3,987 chainMm10,987 chainNetCalJac3,993 chainNetGorGor3,990 chainNetMm10,990 chainNetTarSyr2,990 chainTarSyr2,987 netCalJac3,990 netGorGor3,987 netMm10,987 netTarSyr2,987 netsyntenic chainCalJac3,848 chainCalJac3,1001 chainGorGor3,845 chainGorGor3,998 chainMm10,845 chainMm10,998 chainNetCalJac3,851 chainNetCalJac3,1004 chainNetGorGor3,848 chainNetGorGor3,1001 chainNetMm10,848 chainNetMm10,1001 chainNetTarSyr2,848 chainNetTarSyr2,1001 chainTarSyr2,845 chainTarSyr2,998 netCalJac3,848 netCalJac3,1001 netGorGor3,845 netGorGor3,998 netMm10,845 netMm10,998 netTarSyr2,845 netTarSyr2,998 new augustusGene,329 newer nestedRepeats,270 rmsk,106 newly cpgIslandExt,77 cpgIslandExtUnmasked,80 cpgIslandSuper,77 next chainCalJac3,351 chainCalJac3,380 chainGorGor3,348 chainGorGor3,377 chainMm10,348 chainMm10,377 chainNetCalJac3,354 chainNetCalJac3,383 chainNetGorGor3,351 chainNetGorGor3,380 chainNetMm10,351 chainNetMm10,380 chainNetTarSyr2,351 chainNetTarSyr2,380 chainTarSyr2,348 chainTarSyr2,377 netCalJac3,351 netCalJac3,380 netGorGor3,348 netGorGor3,377 netMm10,348 netMm10,377 netTarSyr2,348 netTarSyr2,377 nig augustusGene,270 no microsat,73 nomask cpgIslandExt,498 cpgIslandExtUnmasked,501 cpgIslandSuper,498 non-alignable chainCalJac3,50 chainGorGor3,49 chainMm10,49 chainNetCalJac3,53 chainNetGorGor3,52 chainNetMm10,52 chainNetTarSyr2,52 chainTarSyr2,49 netCalJac3,50 netGorGor3,49 netMm10,49 netTarSyr2,49 non-coding augustusGene,75 xenoRefGene,193 non-mouse xenoRefGene,3 non-protein-coding xenoRefGene,18 xenoRefGene,201 non-redundant xenoRefGene,374 nonsyn chainCalJac3,557 chainGorGor3,554 chainMm10,554 chainNetCalJac3,560 chainNetGorGor3,557 chainNetMm10,557 chainNetTarSyr2,557 chainTarSyr2,554 netCalJac3,557 netGorGor3,554 netMm10,554 netTarSyr2,554 normally cpgIslandExt,42 cpgIslandExtUnmasked,45 cpgIslandSuper,42 not chainCalJac3,815 chainGorGor3,812 chainMm10,812 chainNetCalJac3,818 chainNetGorGor3,815 chainNetMm10,815 chainNetTarSyr2,815 chainTarSyr2,812 cpgIslandExt,131 cpgIslandExt,186 cpgIslandExtUnmasked,134 cpgIslandExtUnmasked,189 cpgIslandSuper,131 cpgIslandSuper,186 ensemblGeneScaffold,45 mrna,298 netCalJac3,815 netGorGor3,812 netMm10,812 netTarSyr2,812 rmsk,113 rmsk,313 note nestedRepeats,264 novo augustusGene,304 ns chainCalJac3,895 chainGorGor3,892 chainMm10,892 chainNetCalJac3,898 chainNetGorGor3,895 chainNetMm10,895 chainNetTarSyr2,895 chainTarSyr2,892 netCalJac3,895 netGorGor3,892 netMm10,892 netTarSyr2,892 nuclear rmsk,155 rmsk,163 nucleic ensGene,195 ensemblGeneScaffold,134 microsat,125 mrna,479 mrna,504 simpleRepeat,85 xenoRefGene,349 xenoRefGene,382 nucleotide cpgIslandExt,352 cpgIslandExtUnmasked,355 cpgIslandSuper,352 number augustusGene,153 cpgIslandExt,279 cpgIslandExt,286 cpgIslandExt,292 cpgIslandExt,337 cpgIslandExt,383 cpgIslandExt,387 cpgIslandExt,390 cpgIslandExtUnmasked,282 cpgIslandExtUnmasked,289 cpgIslandExtUnmasked,295 cpgIslandExtUnmasked,340 cpgIslandExtUnmasked,386 cpgIslandExtUnmasked,390 cpgIslandExtUnmasked,393 cpgIslandSuper,279 cpgIslandSuper,286 cpgIslandSuper,292 cpgIslandSuper,337 cpgIslandSuper,383 cpgIslandSuper,387 cpgIslandSuper,390 rmsk,233 o xenoRefGene,331 obs cpgIslandExt,380 cpgIslandExtUnmasked,383 cpgIslandSuper,380 observed cpgIslandExt,278 cpgIslandExt,364 cpgIslandExtUnmasked,281 cpgIslandExtUnmasked,367 cpgIslandSuper,278 cpgIslandSuper,364 obtained augustusGene,126 cpgIslandExt,562 cpgIslandExt,573 cpgIslandExtUnmasked,565 cpgIslandExtUnmasked,576 cpgIslandSuper,562 cpgIslandSuper,573 occur simpleRepeat,36 oct augustusGene,334 of augustusGene,72 augustusGene,84 augustusGene,92 augustusGene,94 augustusGene,154 augustusGene,195 augustusGene,236 chainCalJac3,18 chainCalJac3,65 chainCalJac3,184 chainCalJac3,204 chainCalJac3,257 chainCalJac3,279 chainCalJac3,363 chainCalJac3,373 chainCalJac3,491 chainCalJac3,511 chainCalJac3,646 chainCalJac3,651 chainCalJac3,669 chainCalJac3,689 chainCalJac3,889 chainCalJac3,964 chainCalJac3,986 chainCalJac3,1010 chainCalJac3,1024 chainGorGor3,17 chainGorGor3,64 chainGorGor3,182 chainGorGor3,202 chainGorGor3,255 chainGorGor3,277 chainGorGor3,360 chainGorGor3,370 chainGorGor3,488 chainGorGor3,508 chainGorGor3,643 chainGorGor3,648 chainGorGor3,666 chainGorGor3,686 chainGorGor3,886 chainGorGor3,961 chainGorGor3,983 chainGorGor3,1007 chainGorGor3,1021 chainMm10,17 chainMm10,64 chainMm10,182 chainMm10,202 chainMm10,255 chainMm10,277 chainMm10,360 chainMm10,370 chainMm10,488 chainMm10,508 chainMm10,643 chainMm10,648 chainMm10,666 chainMm10,686 chainMm10,886 chainMm10,961 chainMm10,983 chainMm10,1007 chainMm10,1021 chainNetCalJac3,21 chainNetCalJac3,68 chainNetCalJac3,187 chainNetCalJac3,207 chainNetCalJac3,260 chainNetCalJac3,282 chainNetCalJac3,366 chainNetCalJac3,376 chainNetCalJac3,494 chainNetCalJac3,514 chainNetCalJac3,649 chainNetCalJac3,654 chainNetCalJac3,672 chainNetCalJac3,692 chainNetCalJac3,892 chainNetCalJac3,967 chainNetCalJac3,989 chainNetCalJac3,1013 chainNetCalJac3,1027 chainNetGorGor3,20 chainNetGorGor3,67 chainNetGorGor3,185 chainNetGorGor3,205 chainNetGorGor3,258 chainNetGorGor3,280 chainNetGorGor3,363 chainNetGorGor3,373 chainNetGorGor3,491 chainNetGorGor3,511 chainNetGorGor3,646 chainNetGorGor3,651 chainNetGorGor3,669 chainNetGorGor3,689 chainNetGorGor3,889 chainNetGorGor3,964 chainNetGorGor3,986 chainNetGorGor3,1010 chainNetGorGor3,1024 chainNetMm10,20 chainNetMm10,67 chainNetMm10,185 chainNetMm10,205 chainNetMm10,258 chainNetMm10,280 chainNetMm10,363 chainNetMm10,373 chainNetMm10,491 chainNetMm10,511 chainNetMm10,646 chainNetMm10,651 chainNetMm10,669 chainNetMm10,689 chainNetMm10,889 chainNetMm10,964 chainNetMm10,986 chainNetMm10,1010 chainNetMm10,1024 chainNetTarSyr2,20 chainNetTarSyr2,67 chainNetTarSyr2,185 chainNetTarSyr2,205 chainNetTarSyr2,258 chainNetTarSyr2,280 chainNetTarSyr2,363 chainNetTarSyr2,373 chainNetTarSyr2,491 chainNetTarSyr2,511 chainNetTarSyr2,646 chainNetTarSyr2,651 chainNetTarSyr2,669 chainNetTarSyr2,689 chainNetTarSyr2,889 chainNetTarSyr2,964 chainNetTarSyr2,986 chainNetTarSyr2,1010 chainNetTarSyr2,1024 chainTarSyr2,17 chainTarSyr2,64 chainTarSyr2,182 chainTarSyr2,202 chainTarSyr2,255 chainTarSyr2,277 chainTarSyr2,360 chainTarSyr2,370 chainTarSyr2,488 chainTarSyr2,508 chainTarSyr2,643 chainTarSyr2,648 chainTarSyr2,666 chainTarSyr2,686 chainTarSyr2,886 chainTarSyr2,961 chainTarSyr2,983 chainTarSyr2,1007 chainTarSyr2,1021 cpgIslandExt,91 cpgIslandExt,108 cpgIslandExt,144 cpgIslandExt,171 cpgIslandExt,200 cpgIslandExt,221 cpgIslandExt,264 cpgIslandExt,277 cpgIslandExt,280 cpgIslandExt,290 cpgIslandExt,293 cpgIslandExt,312 cpgIslandExt,338 cpgIslandExt,350 cpgIslandExt,363 cpgIslandExt,384 cpgIslandExt,388 cpgIslandExt,391 cpgIslandExt,396 cpgIslandExt,400 cpgIslandExt,592 cpgIslandExtUnmasked,94 cpgIslandExtUnmasked,111 cpgIslandExtUnmasked,147 cpgIslandExtUnmasked,174 cpgIslandExtUnmasked,203 cpgIslandExtUnmasked,224 cpgIslandExtUnmasked,267 cpgIslandExtUnmasked,280 cpgIslandExtUnmasked,283 cpgIslandExtUnmasked,293 cpgIslandExtUnmasked,296 cpgIslandExtUnmasked,315 cpgIslandExtUnmasked,341 cpgIslandExtUnmasked,353 cpgIslandExtUnmasked,366 cpgIslandExtUnmasked,387 cpgIslandExtUnmasked,391 cpgIslandExtUnmasked,394 cpgIslandExtUnmasked,399 cpgIslandExtUnmasked,403 cpgIslandExtUnmasked,595 cpgIslandSuper,91 cpgIslandSuper,108 cpgIslandSuper,144 cpgIslandSuper,171 cpgIslandSuper,200 cpgIslandSuper,221 cpgIslandSuper,264 cpgIslandSuper,277 cpgIslandSuper,280 cpgIslandSuper,290 cpgIslandSuper,293 cpgIslandSuper,312 cpgIslandSuper,338 cpgIslandSuper,350 cpgIslandSuper,363 cpgIslandSuper,384 cpgIslandSuper,388 cpgIslandSuper,391 cpgIslandSuper,396 cpgIslandSuper,400 cpgIslandSuper,592 ensGene,33 ensGene,134 ensemblGeneScaffold,16 ensemblGeneScaffold,39 ensemblGeneScaffold,79 gap,41 gap,64 gap,83 gap,89 gap,123 gc5Base,19 gc5Base,46 gc5Base,52 gc5Base,67 gc5Base,76 genscan,43 genscan,110 genscan,134 genscan,212 gold,43 gold,63 gold,89 gold,114 gold,144 microsat,27 microsat,55 microsat,64 microsat,81 mrna,54 mrna,83 mrna,122 mrna,148 mrna,159 mrna,195 mrna,264 mrna,367 mrna,426 nestedRepeats,4 nestedRepeats,20 nestedRepeats,27 nestedRepeats,48 nestedRepeats,83 nestedRepeats,93 nestedRepeats,108 nestedRepeats,189 nestedRepeats,195 nestedRepeats,203 nestedRepeats,228 nestedRepeats,252 nestedRepeats,350 nestedRepeats,365 nestedRepeats,378 nestedRepeats,399 netCalJac3,18 netCalJac3,65 netCalJac3,184 netCalJac3,204 netCalJac3,257 netCalJac3,279 netCalJac3,363 netCalJac3,373 netCalJac3,491 netCalJac3,511 netCalJac3,646 netCalJac3,651 netCalJac3,669 netCalJac3,689 netCalJac3,889 netCalJac3,964 netCalJac3,986 netCalJac3,1010 netCalJac3,1024 netGorGor3,17 netGorGor3,64 netGorGor3,182 netGorGor3,202 netGorGor3,255 netGorGor3,277 netGorGor3,360 netGorGor3,370 netGorGor3,488 netGorGor3,508 netGorGor3,643 netGorGor3,648 netGorGor3,666 netGorGor3,686 netGorGor3,886 netGorGor3,961 netGorGor3,983 netGorGor3,1007 netGorGor3,1021 netMm10,17 netMm10,64 netMm10,182 netMm10,202 netMm10,255 netMm10,277 netMm10,360 netMm10,370 netMm10,488 netMm10,508 netMm10,643 netMm10,648 netMm10,666 netMm10,686 netMm10,886 netMm10,961 netMm10,983 netMm10,1007 netMm10,1021 netTarSyr2,17 netTarSyr2,64 netTarSyr2,182 netTarSyr2,202 netTarSyr2,255 netTarSyr2,277 netTarSyr2,360 netTarSyr2,370 netTarSyr2,488 netTarSyr2,508 netTarSyr2,643 netTarSyr2,648 netTarSyr2,666 netTarSyr2,686 netTarSyr2,886 netTarSyr2,961 netTarSyr2,983 netTarSyr2,1007 netTarSyr2,1021 quality,21 quality,32 quality,38 quality,62 quality,68 quality,81 quality,93 rmsk,39 rmsk,59 rmsk,84 rmsk,151 rmsk,206 rmsk,216 rmsk,234 rmsk,246 rmsk,264 rmsk,373 rmsk,388 rmsk,401 rmsk,422 simpleRepeat,40 xenoRefGene,63 xenoRefGene,82 xenoRefGene,96 xenoRefGene,121 xenoRefGene,233 xenoRefGene,265 xenoRefGene,377 off chainCalJac3,342 chainCalJac3,348 chainGorGor3,339 chainGorGor3,345 chainMm10,339 chainMm10,345 chainNetCalJac3,345 chainNetCalJac3,351 chainNetGorGor3,342 chainNetGorGor3,348 chainNetMm10,342 chainNetMm10,348 chainNetTarSyr2,342 chainNetTarSyr2,348 chainTarSyr2,339 chainTarSyr2,345 netCalJac3,342 netCalJac3,348 netGorGor3,339 netGorGor3,345 netMm10,339 netMm10,345 netTarSyr2,339 netTarSyr2,345 xenoRefGene,134 offers genscan,79 often chainCalJac3,215 chainCalJac3,227 chainGorGor3,213 chainGorGor3,225 chainMm10,213 chainMm10,225 chainNetCalJac3,218 chainNetCalJac3,230 chainNetGorGor3,216 chainNetGorGor3,228 chainNetMm10,216 chainNetMm10,228 chainNetTarSyr2,216 chainNetTarSyr2,228 chainTarSyr2,213 chainTarSyr2,225 netCalJac3,215 netCalJac3,227 netGorGor3,213 netGorGor3,225 netMm10,213 netMm10,225 netTarSyr2,213 netTarSyr2,225 omitted nestedRepeats,165 on augustusGene,29 augustusGene,37 augustusGene,151 chainCalJac3,330 chainCalJac3,356 chainCalJac3,459 chainCalJac3,473 chainCalJac3,523 chainCalJac3,528 chainCalJac3,543 chainCalJac3,776 chainGorGor3,327 chainGorGor3,353 chainGorGor3,456 chainGorGor3,470 chainGorGor3,520 chainGorGor3,525 chainGorGor3,540 chainGorGor3,773 chainMm10,327 chainMm10,353 chainMm10,456 chainMm10,470 chainMm10,520 chainMm10,525 chainMm10,540 chainMm10,773 chainNetCalJac3,333 chainNetCalJac3,359 chainNetCalJac3,462 chainNetCalJac3,476 chainNetCalJac3,526 chainNetCalJac3,531 chainNetCalJac3,546 chainNetCalJac3,779 chainNetGorGor3,330 chainNetGorGor3,356 chainNetGorGor3,459 chainNetGorGor3,473 chainNetGorGor3,523 chainNetGorGor3,528 chainNetGorGor3,543 chainNetGorGor3,776 chainNetMm10,330 chainNetMm10,356 chainNetMm10,459 chainNetMm10,473 chainNetMm10,523 chainNetMm10,528 chainNetMm10,543 chainNetMm10,776 chainNetTarSyr2,330 chainNetTarSyr2,356 chainNetTarSyr2,459 chainNetTarSyr2,473 chainNetTarSyr2,523 chainNetTarSyr2,528 chainNetTarSyr2,543 chainNetTarSyr2,776 chainTarSyr2,327 chainTarSyr2,353 chainTarSyr2,456 chainTarSyr2,470 chainTarSyr2,520 chainTarSyr2,525 chainTarSyr2,540 chainTarSyr2,773 cpgIslandExt,287 cpgIslandExt,323 cpgIslandExt,544 cpgIslandExt,551 cpgIslandExtUnmasked,5 cpgIslandExtUnmasked,290 cpgIslandExtUnmasked,326 cpgIslandExtUnmasked,547 cpgIslandExtUnmasked,554 cpgIslandSuper,287 cpgIslandSuper,323 cpgIslandSuper,544 cpgIslandSuper,551 ensGene,20 ensGene,118 ensGene,123 ensGene,129 ensGene,140 gap,86 genscan,27 genscan,52 mrna,178 mrna,227 nestedRepeats,141 nestedRepeats,176 nestedRepeats,277 netCalJac3,330 netCalJac3,356 netCalJac3,459 netCalJac3,473 netCalJac3,523 netCalJac3,528 netCalJac3,543 netCalJac3,776 netGorGor3,327 netGorGor3,353 netGorGor3,456 netGorGor3,470 netGorGor3,520 netGorGor3,525 netGorGor3,540 netGorGor3,773 netMm10,327 netMm10,353 netMm10,456 netMm10,470 netMm10,520 netMm10,525 netMm10,540 netMm10,773 netTarSyr2,327 netTarSyr2,353 netTarSyr2,456 netTarSyr2,470 netTarSyr2,520 netTarSyr2,525 netTarSyr2,540 netTarSyr2,773 rmsk,74 xenoRefGene,345 once mrna,212 one augustusGene,169 chainCalJac3,192 chainCalJac3,364 chainCalJac3,510 chainCalJac3,803 chainCalJac3,899 chainGorGor3,190 chainGorGor3,361 chainGorGor3,507 chainGorGor3,800 chainGorGor3,896 chainMm10,190 chainMm10,361 chainMm10,507 chainMm10,800 chainMm10,896 chainNetCalJac3,195 chainNetCalJac3,367 chainNetCalJac3,513 chainNetCalJac3,806 chainNetCalJac3,902 chainNetGorGor3,193 chainNetGorGor3,364 chainNetGorGor3,510 chainNetGorGor3,803 chainNetGorGor3,899 chainNetMm10,193 chainNetMm10,364 chainNetMm10,510 chainNetMm10,803 chainNetMm10,899 chainNetTarSyr2,193 chainNetTarSyr2,364 chainNetTarSyr2,510 chainNetTarSyr2,803 chainNetTarSyr2,899 chainTarSyr2,190 chainTarSyr2,361 chainTarSyr2,507 chainTarSyr2,800 chainTarSyr2,896 cpgIslandExt,233 cpgIslandExtUnmasked,236 cpgIslandSuper,233 mrna,119 mrna,230 mrna,263 netCalJac3,192 netCalJac3,364 netCalJac3,510 netCalJac3,803 netCalJac3,899 netGorGor3,190 netGorGor3,361 netGorGor3,507 netGorGor3,800 netGorGor3,896 netMm10,190 netMm10,361 netMm10,507 netMm10,800 netMm10,896 netTarSyr2,190 netTarSyr2,361 netTarSyr2,507 netTarSyr2,800 netTarSyr2,896 only chainCalJac3,360 chainGorGor3,357 chainMm10,357 chainNetCalJac3,363 chainNetGorGor3,360 chainNetMm10,360 chainNetTarSyr2,360 chainTarSyr2,357 cpgIslandExt,196 cpgIslandExtUnmasked,199 cpgIslandSuper,196 microsat,61 mrna,103 mrna,243 mrna,316 mrna,417 netCalJac3,360 netGorGor3,357 netMm10,357 netTarSyr2,357 xenoRefGene,210 xenoRefGene,256 onto ensemblGeneScaffold,21 open-3.0 nestedRepeats,331 rmsk,354 opin nestedRepeats,385 nestedRepeats,407 rmsk,408 rmsk,430 opposite chainCalJac3,555 chainGorGor3,552 chainMm10,552 chainNetCalJac3,558 chainNetGorGor3,555 chainNetMm10,555 chainNetTarSyr2,555 chainTarSyr2,552 netCalJac3,555 netGorGor3,552 netMm10,552 netTarSyr2,552 option augustusGene,167 augustusGene,187 genscan,94 mrna,353 xenoRefGene,114 xenoRefGene,166 optional xenoRefGene,144 options gc5Base,70 genscan,85 mrna,384 quality,84 or chainCalJac3,31 chainCalJac3,131 chainCalJac3,154 chainCalJac3,187 chainCalJac3,494 chainCalJac3,871 chainCalJac3,900 chainGorGor3,30 chainGorGor3,129 chainGorGor3,152 chainGorGor3,185 chainGorGor3,491 chainGorGor3,868 chainGorGor3,897 chainMm10,30 chainMm10,129 chainMm10,152 chainMm10,185 chainMm10,491 chainMm10,868 chainMm10,897 chainNetCalJac3,34 chainNetCalJac3,134 chainNetCalJac3,157 chainNetCalJac3,190 chainNetCalJac3,497 chainNetCalJac3,874 chainNetCalJac3,903 chainNetGorGor3,33 chainNetGorGor3,132 chainNetGorGor3,155 chainNetGorGor3,188 chainNetGorGor3,494 chainNetGorGor3,871 chainNetGorGor3,900 chainNetMm10,33 chainNetMm10,132 chainNetMm10,155 chainNetMm10,188 chainNetMm10,494 chainNetMm10,871 chainNetMm10,900 chainNetTarSyr2,33 chainNetTarSyr2,132 chainNetTarSyr2,155 chainNetTarSyr2,188 chainNetTarSyr2,494 chainNetTarSyr2,871 chainNetTarSyr2,900 chainTarSyr2,30 chainTarSyr2,129 chainTarSyr2,152 chainTarSyr2,185 chainTarSyr2,491 chainTarSyr2,868 chainTarSyr2,897 cpgIslandExt,127 cpgIslandExt,266 cpgIslandExt,523 cpgIslandExtUnmasked,130 cpgIslandExtUnmasked,269 cpgIslandExtUnmasked,526 cpgIslandSuper,127 cpgIslandSuper,266 cpgIslandSuper,523 ensGene,68 ensGene,89 ensGene,110 ensemblGeneScaffold,26 ensemblGeneScaffold,54 mrna,120 mrna,255 mrna,274 mrna,283 nestedRepeats,96 nestedRepeats,117 nestedRepeats,158 netCalJac3,31 netCalJac3,131 netCalJac3,154 netCalJac3,187 netCalJac3,494 netCalJac3,871 netCalJac3,900 netGorGor3,30 netGorGor3,129 netGorGor3,152 netGorGor3,185 netGorGor3,491 netGorGor3,868 netGorGor3,897 netMm10,30 netMm10,129 netMm10,152 netMm10,185 netMm10,491 netMm10,868 netMm10,897 netTarSyr2,30 netTarSyr2,129 netTarSyr2,152 netTarSyr2,185 netTarSyr2,491 netTarSyr2,868 netTarSyr2,897 rmsk,251 rmsk,280 xenoRefGene,132 order ensemblGeneScaffold,49 gap,80 gold,111 organ mrna,144 mrna,150 organism chainCalJac3,339 chainCalJac3,369 chainGorGor3,336 chainGorGor3,366 chainMm10,336 chainMm10,366 chainNetCalJac3,342 chainNetCalJac3,372 chainNetGorGor3,339 chainNetGorGor3,369 chainNetMm10,339 chainNetMm10,369 chainNetTarSyr2,339 chainNetTarSyr2,369 chainTarSyr2,336 chainTarSyr2,366 netCalJac3,339 netCalJac3,369 netGorGor3,336 netGorGor3,366 netMm10,336 netMm10,366 netTarSyr2,336 netTarSyr2,366 organisms chainCalJac3,916 chainGorGor3,913 chainMm10,913 chainNetCalJac3,919 chainNetGorGor3,916 chainNetMm10,916 chainNetTarSyr2,916 chainTarSyr2,913 nestedRepeats,295 netCalJac3,916 netGorGor3,913 netMm10,913 netTarSyr2,913 rmsk,302 xenoRefGene,21 organizes chainCalJac3,624 chainGorGor3,621 chainMm10,621 chainNetCalJac3,627 chainNetGorGor3,624 chainNetMm10,624 chainNetTarSyr2,624 chainTarSyr2,621 netCalJac3,624 netGorGor3,621 netMm10,621 netTarSyr2,621 orientation chainCalJac3,556 chainGorGor3,553 chainMm10,553 chainNetCalJac3,559 chainNetGorGor3,556 chainNetMm10,556 chainNetTarSyr2,556 chainTarSyr2,553 cytoBandIdeo,6 gap,82 gold,113 netCalJac3,556 netGorGor3,553 netMm10,553 netTarSyr2,553 origin nestedRepeats,398 rmsk,421 original nestedRepeats,84 orthologs chainCalJac3,292 chainGorGor3,290 chainMm10,290 chainNetCalJac3,295 chainNetGorGor3,293 chainNetMm10,293 chainNetTarSyr2,293 chainTarSyr2,290 netCalJac3,292 netGorGor3,290 netMm10,290 netTarSyr2,290 ostell mrna,474 mrna,498 other augustusGene,208 chainCalJac3,25 chainCalJac3,421 chainCalJac3,514 chainGorGor3,24 chainGorGor3,418 chainGorGor3,511 chainMm10,24 chainMm10,418 chainMm10,511 chainNetCalJac3,28 chainNetCalJac3,424 chainNetCalJac3,517 chainNetGorGor3,27 chainNetGorGor3,421 chainNetGorGor3,514 chainNetMm10,27 chainNetMm10,421 chainNetMm10,514 chainNetTarSyr2,27 chainNetTarSyr2,421 chainNetTarSyr2,514 chainTarSyr2,24 chainTarSyr2,418 chainTarSyr2,511 cpgIslandExt,135 cpgIslandExtUnmasked,138 cpgIslandSuper,135 nestedRepeats,376 netCalJac3,25 netCalJac3,421 netCalJac3,514 netGorGor3,24 netGorGor3,418 netGorGor3,511 netMm10,24 netMm10,418 netMm10,511 netTarSyr2,24 netTarSyr2,418 netTarSyr2,511 rmsk,195 rmsk,399 xenoRefGene,1 xenoRefGene,22 others cpgIslandExt,247 cpgIslandExtUnmasked,250 cpgIslandSuper,247 nestedRepeats,214 otherwise cpgIslandExt,185 cpgIslandExtUnmasked,188 cpgIslandSuper,185 ouml augustusGene,269 our augustusGene,43 cpgIslandExt,536 cpgIslandExt,545 cpgIslandExt,552 cpgIslandExtUnmasked,539 cpgIslandExtUnmasked,548 cpgIslandExtUnmasked,555 cpgIslandSuper,536 cpgIslandSuper,545 cpgIslandSuper,552 ensGene,26 ensGene,84 ensGene,91 ensGene,113 ensGene,124 ensGene,130 ensGene,141 genscan,58 rmsk,124 rmsk,129 out chainCalJac3,645 chainGorGor3,642 chainMm10,642 chainNetCalJac3,648 chainNetGorGor3,645 chainNetMm10,645 chainNetTarSyr2,645 chainTarSyr2,642 netCalJac3,645 netGorGor3,642 netMm10,642 netTarSyr2,642 quality,43 output cpgIslandExt,499 cpgIslandExtUnmasked,502 cpgIslandSuper,499 nestedRepeats,26 nestedRepeats,110 windowmaskerSdust,63 windowmaskerSdust,72 outputs rmsk,35 over chainCalJac3,200 chainCalJac3,660 chainGorGor3,198 chainGorGor3,657 chainMm10,198 chainMm10,657 chainNetCalJac3,203 chainNetCalJac3,663 chainNetGorGor3,201 chainNetGorGor3,660 chainNetMm10,201 chainNetMm10,660 chainNetTarSyr2,201 chainNetTarSyr2,660 chainTarSyr2,198 chainTarSyr2,657 cpgIslandExt,97 cpgIslandExtUnmasked,100 cpgIslandSuper,97 netCalJac3,200 netCalJac3,660 netGorGor3,198 netGorGor3,657 netMm10,198 netMm10,657 netTarSyr2,198 netTarSyr2,657 overlapping chainCalJac3,116 chainCalJac3,180 chainGorGor3,114 chainGorGor3,178 chainMm10,114 chainMm10,178 chainNetCalJac3,119 chainNetCalJac3,183 chainNetGorGor3,117 chainNetGorGor3,181 chainNetMm10,117 chainNetMm10,181 chainNetTarSyr2,117 chainNetTarSyr2,181 chainTarSyr2,114 chainTarSyr2,178 netCalJac3,116 netCalJac3,180 netGorGor3,114 netGorGor3,178 netMm10,114 netMm10,178 netTarSyr2,114 netTarSyr2,178 p genscan,205 nestedRepeats,329 rmsk,352 pac chainCalJac3,1044 chainGorGor3,1041 chainMm10,1041 chainNetCalJac3,1047 chainNetGorGor3,1044 chainNetMm10,1044 chainNetTarSyr2,1044 chainTarSyr2,1041 netCalJac3,1044 netGorGor3,1041 netMm10,1041 netTarSyr2,1041 pack chainCalJac3,237 chainGorGor3,235 chainMm10,235 chainNetCalJac3,240 chainNetGorGor3,238 chainNetMm10,238 chainNetTarSyr2,238 chainTarSyr2,235 nestedRepeats,116 netCalJac3,237 netGorGor3,235 netMm10,235 netTarSyr2,235 page cpgIslandExt,223 cpgIslandExt,547 cpgIslandExtUnmasked,226 cpgIslandExtUnmasked,550 cpgIslandSuper,223 cpgIslandSuper,547 ensGene,127 ensGene,166 genscan,78 genscan,123 mrna,59 mrna,364 mrna,385 rmsk,77 xenoRefGene,100 xenoRefGene,191 pages chainCalJac3,781 chainGorGor3,778 chainMm10,778 chainNetCalJac3,784 chainNetGorGor3,781 chainNetMm10,781 chainNetTarSyr2,781 chainTarSyr2,778 netCalJac3,781 netGorGor3,778 netMm10,778 netTarSyr2,778 pair gap,96 pairwise chainCalJac3,1022 chainCalJac3,1040 chainGorGor3,1019 chainGorGor3,1037 chainMm10,1019 chainMm10,1037 chainNetCalJac3,1025 chainNetCalJac3,1043 chainNetGorGor3,1022 chainNetGorGor3,1040 chainNetMm10,1022 chainNetMm10,1040 chainNetTarSyr2,1022 chainNetTarSyr2,1040 chainTarSyr2,1019 chainTarSyr2,1037 netCalJac3,1022 netCalJac3,1040 netGorGor3,1019 netGorGor3,1037 netMm10,1019 netMm10,1037 netTarSyr2,1019 netTarSyr2,1037 paralogs chainCalJac3,230 chainGorGor3,228 chainMm10,228 chainNetCalJac3,233 chainNetGorGor3,231 chainNetMm10,231 chainNetTarSyr2,231 chainTarSyr2,228 netCalJac3,230 netGorGor3,228 netMm10,228 netTarSyr2,228 parameters windowmaskerSdust,57 parent cpgIslandExt,83 cpgIslandExtUnmasked,86 cpgIslandSuper,83 parenthesis gold,148 part chainCalJac3,278 chainGorGor3,276 chainMm10,276 chainNetCalJac3,281 chainNetGorGor3,279 chainNetMm10,279 chainNetTarSyr2,279 chainTarSyr2,276 netCalJac3,278 netGorGor3,276 netMm10,276 netTarSyr2,276 quality,92 particular augustusGene,234 chainCalJac3,202 chainGorGor3,200 chainMm10,200 chainNetCalJac3,205 chainNetGorGor3,203 chainNetMm10,203 chainNetTarSyr2,203 chainTarSyr2,200 netCalJac3,202 netGorGor3,200 netMm10,200 netTarSyr2,200 particularly cpgIslandExt,21 cpgIslandExtUnmasked,24 cpgIslandSuper,21 parts chainCalJac3,40 chainCalJac3,51 chainGorGor3,39 chainGorGor3,50 chainMm10,39 chainMm10,50 chainNetCalJac3,43 chainNetCalJac3,54 chainNetGorGor3,42 chainNetGorGor3,53 chainNetMm10,42 chainNetMm10,53 chainNetTarSyr2,42 chainNetTarSyr2,53 chainTarSyr2,39 chainTarSyr2,50 netCalJac3,40 netCalJac3,51 netGorGor3,39 netGorGor3,50 netMm10,39 netMm10,50 netTarSyr2,39 netTarSyr2,50 patterns augustusGene,56 pennsylvania chainCalJac3,927 chainCalJac3,1030 chainGorGor3,924 chainGorGor3,1027 chainMm10,924 chainMm10,1027 chainNetCalJac3,930 chainNetCalJac3,1033 chainNetGorGor3,927 chainNetGorGor3,1030 chainNetMm10,927 chainNetMm10,1030 chainNetTarSyr2,927 chainNetTarSyr2,1030 chainTarSyr2,924 chainTarSyr2,1027 netCalJac3,927 netCalJac3,1030 netGorGor3,924 netGorGor3,1027 netMm10,924 netMm10,1027 netTarSyr2,924 netTarSyr2,1027 percent gc5Base,2 gc5Base,4 gc5Base,14 percentage cpgIslandExt,345 cpgIslandExtUnmasked,348 cpgIslandSuper,345 gc5Base,18 perfect microsat,31 performed cpgIslandExt,405 cpgIslandExtUnmasked,408 cpgIslandSuper,405 perhaps cpgIslandExt,137 cpgIslandExtUnmasked,140 cpgIslandSuper,137 period microsat,65 permitted rmsk,314 ph.d chainCalJac3,1027 chainGorGor3,1024 chainMm10,1024 chainNetCalJac3,1030 chainNetGorGor3,1027 chainNetMm10,1027 chainNetTarSyr2,1027 chainTarSyr2,1024 netCalJac3,1027 netGorGor3,1024 netMm10,1024 netTarSyr2,1024 place chainCalJac3,800 chainGorGor3,797 chainMm10,797 chainNetCalJac3,803 chainNetGorGor3,800 chainNetMm10,800 chainNetTarSyr2,800 chainTarSyr2,797 netCalJac3,800 netGorGor3,797 netMm10,797 netTarSyr2,797 placed chainCalJac3,842 chainGorGor3,839 chainMm10,839 chainNetCalJac3,845 chainNetGorGor3,842 chainNetMm10,842 chainNetTarSyr2,842 chainTarSyr2,839 netCalJac3,842 netGorGor3,839 netMm10,839 netTarSyr2,839 places mrna,407 xenoRefGene,246 please ensGene,41 ensGene,160 pmc chainCalJac3,1089 chainCalJac3,1120 chainGorGor3,1086 chainGorGor3,1117 chainMm10,1086 chainMm10,1117 chainNetCalJac3,1092 chainNetCalJac3,1123 chainNetGorGor3,1089 chainNetGorGor3,1120 chainNetMm10,1089 chainNetMm10,1120 chainNetTarSyr2,1089 chainNetTarSyr2,1120 chainTarSyr2,1086 chainTarSyr2,1117 ensGene,206 ensemblGeneScaffold,145 microsat,136 mrna,490 mrna,516 mrna,534 netCalJac3,1089 netCalJac3,1120 netGorGor3,1086 netGorGor3,1117 netMm10,1086 netMm10,1117 netTarSyr2,1086 netTarSyr2,1117 simpleRepeat,96 xenoRefGene,318 xenoRefGene,360 xenoRefGene,394 pmc148217 microsat,137 simpleRepeat,97 pmc187518 mrna,535 xenoRefGene,319 pmc208784 chainCalJac3,1090 chainGorGor3,1087 chainMm10,1087 chainNetCalJac3,1093 chainNetGorGor3,1090 chainNetMm10,1090 chainNetTarSyr2,1090 chainTarSyr2,1087 netCalJac3,1090 netGorGor3,1087 netMm10,1087 netTarSyr2,1087 pmc308779 mrna,517 pmc3531190 mrna,491 pmc3965018 xenoRefGene,361 pmc430961 chainCalJac3,1121 chainGorGor3,1118 chainMm10,1118 chainNetCalJac3,1124 chainNetGorGor3,1121 chainNetMm10,1121 chainNetTarSyr2,1121 chainTarSyr2,1118 netCalJac3,1121 netGorGor3,1118 netMm10,1118 netTarSyr2,1118 pmc539979 xenoRefGene,395 pmc99161 ensGene,207 ensemblGeneScaffold,146 pmid augustusGene,314 augustusGene,339 chainCalJac3,1049 chainCalJac3,1087 chainCalJac3,1118 chainGorGor3,1046 chainGorGor3,1084 chainGorGor3,1115 chainMm10,1046 chainMm10,1084 chainMm10,1115 chainNetCalJac3,1052 chainNetCalJac3,1090 chainNetCalJac3,1121 chainNetGorGor3,1049 chainNetGorGor3,1087 chainNetGorGor3,1118 chainNetMm10,1049 chainNetMm10,1087 chainNetMm10,1118 chainNetTarSyr2,1049 chainNetTarSyr2,1087 chainNetTarSyr2,1118 chainTarSyr2,1046 chainTarSyr2,1084 chainTarSyr2,1115 cpgIslandExt,622 cpgIslandExtUnmasked,625 cpgIslandSuper,622 ensGene,204 ensemblGeneScaffold,143 genscan,229 microsat,134 mrna,488 mrna,514 mrna,532 nestedRepeats,360 nestedRepeats,393 nestedRepeats,415 netCalJac3,1049 netCalJac3,1087 netCalJac3,1118 netGorGor3,1046 netGorGor3,1084 netGorGor3,1115 netMm10,1046 netMm10,1084 netMm10,1115 netTarSyr2,1046 netTarSyr2,1084 netTarSyr2,1115 rmsk,383 rmsk,416 rmsk,438 simpleRepeat,94 windowmaskerSdust,113 xenoRefGene,316 xenoRefGene,358 xenoRefGene,392 point rmsk,269 poly-a augustusGene,62 polymorphic microsat,41 simpleRepeat,46 population microsat,44 position chainCalJac3,716 chainGorGor3,713 chainMm10,713 chainNetCalJac3,719 chainNetGorGor3,716 chainNetMm10,716 chainNetTarSyr2,716 chainTarSyr2,713 netCalJac3,716 netGorGor3,713 netMm10,713 netTarSyr2,713 quality,31 possible chainCalJac3,415 chainGorGor3,412 chainMm10,412 chainNetCalJac3,418 chainNetGorGor3,415 chainNetMm10,415 chainNetTarSyr2,415 chainTarSyr2,412 netCalJac3,415 netGorGor3,412 netMm10,412 netTarSyr2,412 possibly chainCalJac3,291 chainGorGor3,289 chainMm10,289 chainNetCalJac3,294 chainNetGorGor3,292 chainNetMm10,292 chainNetTarSyr2,292 chainTarSyr2,289 netCalJac3,291 netGorGor3,289 netMm10,289 netTarSyr2,289 simpleRepeat,18 potential cpgIslandExt,175 cpgIslandExtUnmasked,178 cpgIslandSuper,175 pre-mrna genscan,185 predicted cpgIslandExt,228 cpgIslandExtUnmasked,231 cpgIslandSuper,228 xenoRefGene,70 prediction augustusGene,321 ensemblGeneScaffold,86 genscan,73 genscan,211 xenoRefGene,55 predictions augustusGene,6 augustusGene,11 augustusGene,18 augustusGene,26 augustusGene,191 ensGene,8 ensGene,12 ensGene,40 genscan,5 genscan,9 genscan,14 genscan,24 genscan,112 genscan,118 xenoRefGene,10 xenoRefGene,157 xenoRefGene,186 prepared gc5Base,80 present cpgIslandExt,154 cpgIslandExtUnmasked,157 cpgIslandSuper,154 rmsk,44 presentation gc5Base,75 pressure cpgIslandExt,123 cpgIslandExtUnmasked,126 cpgIslandSuper,123 previous ensGene,132 previously chainCalJac3,920 chainGorGor3,917 chainMm10,917 chainNetCalJac3,923 chainNetGorGor3,920 chainNetMm10,920 chainNetTarSyr2,920 chainTarSyr2,917 netCalJac3,920 netGorGor3,917 netMm10,917 netTarSyr2,917 principal gap,121 printf cpgIslandExt,435 cpgIslandExtUnmasked,438 cpgIslandSuper,435 proc chainCalJac3,1074 chainGorGor3,1071 chainMm10,1071 chainNetCalJac3,1077 chainNetGorGor3,1074 chainNetMm10,1074 chainNetTarSyr2,1074 chainTarSyr2,1071 netCalJac3,1074 netGorGor3,1071 netMm10,1071 netTarSyr2,1071 procedures gap,23 gold,25 process chainCalJac3,824 chainGorGor3,821 chainMm10,821 chainNetCalJac3,827 chainNetGorGor3,824 chainNetMm10,824 chainNetTarSyr2,824 chainTarSyr2,821 netCalJac3,824 netGorGor3,821 netMm10,821 netTarSyr2,821 processed chainCalJac3,218 chainGorGor3,216 chainMm10,216 chainNetCalJac3,221 chainNetGorGor3,219 chainNetMm10,219 chainNetTarSyr2,219 chainTarSyr2,216 netCalJac3,218 netGorGor3,216 netMm10,216 netTarSyr2,216 produced mrna,446 xenoRefGene,284 program augustusGene,21 augustusGene,257 chainCalJac3,615 chainCalJac3,656 chainCalJac3,794 chainCalJac3,847 chainCalJac3,879 chainCalJac3,955 chainCalJac3,958 chainGorGor3,612 chainGorGor3,653 chainGorGor3,791 chainGorGor3,844 chainGorGor3,876 chainGorGor3,952 chainGorGor3,955 chainMm10,612 chainMm10,653 chainMm10,791 chainMm10,844 chainMm10,876 chainMm10,952 chainMm10,955 chainNetCalJac3,618 chainNetCalJac3,659 chainNetCalJac3,797 chainNetCalJac3,850 chainNetCalJac3,882 chainNetCalJac3,958 chainNetCalJac3,961 chainNetGorGor3,615 chainNetGorGor3,656 chainNetGorGor3,794 chainNetGorGor3,847 chainNetGorGor3,879 chainNetGorGor3,955 chainNetGorGor3,958 chainNetMm10,615 chainNetMm10,656 chainNetMm10,794 chainNetMm10,847 chainNetMm10,879 chainNetMm10,955 chainNetMm10,958 chainNetTarSyr2,615 chainNetTarSyr2,656 chainNetTarSyr2,794 chainNetTarSyr2,847 chainNetTarSyr2,879 chainNetTarSyr2,955 chainNetTarSyr2,958 chainTarSyr2,612 chainTarSyr2,653 chainTarSyr2,791 chainTarSyr2,844 chainTarSyr2,876 chainTarSyr2,952 chainTarSyr2,955 cpgIslandExt,559 cpgIslandExt,569 cpgIslandExt,594 cpgIslandExtUnmasked,562 cpgIslandExtUnmasked,572 cpgIslandExtUnmasked,597 cpgIslandSuper,559 cpgIslandSuper,569 cpgIslandSuper,594 genscan,18 genscan,137 genscan,178 microsat,100 microsat,120 mrna,399 nestedRepeats,30 netCalJac3,615 netCalJac3,656 netCalJac3,794 netCalJac3,847 netCalJac3,879 netCalJac3,955 netCalJac3,958 netGorGor3,612 netGorGor3,653 netGorGor3,791 netGorGor3,844 netGorGor3,876 netGorGor3,952 netGorGor3,955 netMm10,612 netMm10,653 netMm10,791 netMm10,844 netMm10,876 netMm10,952 netMm10,955 netTarSyr2,612 netTarSyr2,653 netTarSyr2,791 netTarSyr2,844 netTarSyr2,876 netTarSyr2,952 netTarSyr2,955 rmsk,20 rmsk,34 simpleRepeat,62 simpleRepeat,80 programmatic ensGene,99 programs chainCalJac3,1004 chainGorGor3,1001 chainMm10,1001 chainNetCalJac3,1007 chainNetGorGor3,1004 chainNetMm10,1004 chainNetTarSyr2,1004 chainTarSyr2,1001 netCalJac3,1004 netGorGor3,1001 netMm10,1001 netTarSyr2,1001 project ensGene,194 ensemblGeneScaffold,133 xenoRefGene,301 promoter cpgIslandExt,40 cpgIslandExtUnmasked,43 cpgIslandSuper,40 proofreading cpgIslandExt,93 cpgIslandExtUnmasked,96 cpgIslandSuper,93 protein-coding augustusGene,73 xenoRefGene,16 xenoRefGene,199 proteins xenoRefGene,381 provided quality,90 provides gap,33 gold,35 providing augustusGene,254 ensGene,153 ensemblGeneScaffold,103 genscan,175 nestedRepeats,312 rmsk,335 provisional xenoRefGene,72 pruitt xenoRefGene,320 xenoRefGene,362 pseudogenes chainCalJac3,219 chainCalJac3,233 chainGorGor3,217 chainGorGor3,231 chainMm10,217 chainMm10,231 chainNetCalJac3,222 chainNetCalJac3,236 chainNetGorGor3,220 chainNetGorGor3,234 chainNetMm10,220 chainNetMm10,234 chainNetTarSyr2,220 chainNetTarSyr2,234 chainTarSyr2,217 chainTarSyr2,231 netCalJac3,219 netCalJac3,233 netGorGor3,217 netGorGor3,231 netMm10,217 netMm10,231 netTarSyr2,217 netTarSyr2,231 psl mrna,38 public cpgIslandExt,537 cpgIslandExtUnmasked,540 cpgIslandSuper,537 ensGene,114 mrna,457 publicly nestedRepeats,275 pull-down xenoRefGene,173 purpose simpleRepeat,32 qgap chainCalJac3,728 chainGorGor3,725 chainMm10,725 chainNetCalJac3,731 chainNetGorGor3,728 chainNetMm10,728 chainNetTarSyr2,728 chainTarSyr2,725 netCalJac3,728 netGorGor3,725 netMm10,725 netTarSyr2,725 quality mrna,56 quality,1 quality,6 quality,13 quality,19 quality,37 quality,87 queried cpgIslandExt,533 cpgIslandExtUnmasked,536 cpgIslandSuper,533 ensGene,105 query rmsk,47 rmsk,61 quickly mrna,341 xenoRefGene,152 quite simpleRepeat,45 quot chainCalJac3,27 chainCalJac3,29 chainCalJac3,34 chainCalJac3,36 chainCalJac3,105 chainCalJac3,107 chainCalJac3,236 chainCalJac3,238 chainCalJac3,240 chainCalJac3,242 chainCalJac3,347 chainCalJac3,349 chainCalJac3,690 chainCalJac3,692 chainGorGor3,26 chainGorGor3,28 chainGorGor3,33 chainGorGor3,35 chainGorGor3,103 chainGorGor3,105 chainGorGor3,234 chainGorGor3,236 chainGorGor3,238 chainGorGor3,240 chainGorGor3,344 chainGorGor3,346 chainGorGor3,687 chainGorGor3,689 chainMm10,26 chainMm10,28 chainMm10,33 chainMm10,35 chainMm10,103 chainMm10,105 chainMm10,234 chainMm10,236 chainMm10,238 chainMm10,240 chainMm10,344 chainMm10,346 chainMm10,687 chainMm10,689 chainNetCalJac3,30 chainNetCalJac3,32 chainNetCalJac3,37 chainNetCalJac3,39 chainNetCalJac3,108 chainNetCalJac3,110 chainNetCalJac3,239 chainNetCalJac3,241 chainNetCalJac3,243 chainNetCalJac3,245 chainNetCalJac3,350 chainNetCalJac3,352 chainNetCalJac3,693 chainNetCalJac3,695 chainNetGorGor3,29 chainNetGorGor3,31 chainNetGorGor3,36 chainNetGorGor3,38 chainNetGorGor3,106 chainNetGorGor3,108 chainNetGorGor3,237 chainNetGorGor3,239 chainNetGorGor3,241 chainNetGorGor3,243 chainNetGorGor3,347 chainNetGorGor3,349 chainNetGorGor3,690 chainNetGorGor3,692 chainNetMm10,29 chainNetMm10,31 chainNetMm10,36 chainNetMm10,38 chainNetMm10,106 chainNetMm10,108 chainNetMm10,237 chainNetMm10,239 chainNetMm10,241 chainNetMm10,243 chainNetMm10,347 chainNetMm10,349 chainNetMm10,690 chainNetMm10,692 chainNetTarSyr2,29 chainNetTarSyr2,31 chainNetTarSyr2,36 chainNetTarSyr2,38 chainNetTarSyr2,106 chainNetTarSyr2,108 chainNetTarSyr2,237 chainNetTarSyr2,239 chainNetTarSyr2,241 chainNetTarSyr2,243 chainNetTarSyr2,347 chainNetTarSyr2,349 chainNetTarSyr2,690 chainNetTarSyr2,692 chainTarSyr2,26 chainTarSyr2,28 chainTarSyr2,33 chainTarSyr2,35 chainTarSyr2,103 chainTarSyr2,105 chainTarSyr2,234 chainTarSyr2,236 chainTarSyr2,238 chainTarSyr2,240 chainTarSyr2,344 chainTarSyr2,346 chainTarSyr2,687 chainTarSyr2,689 gc5Base,58 gc5Base,62 mrna,187 mrna,189 mrna,238 mrna,240 mrna,254 mrna,256 mrna,290 mrna,292 mrna,307 mrna,309 netCalJac3,27 netCalJac3,29 netCalJac3,34 netCalJac3,36 netCalJac3,105 netCalJac3,107 netCalJac3,236 netCalJac3,238 netCalJac3,240 netCalJac3,242 netCalJac3,347 netCalJac3,349 netCalJac3,690 netCalJac3,692 netGorGor3,26 netGorGor3,28 netGorGor3,33 netGorGor3,35 netGorGor3,103 netGorGor3,105 netGorGor3,234 netGorGor3,236 netGorGor3,238 netGorGor3,240 netGorGor3,344 netGorGor3,346 netGorGor3,687 netGorGor3,689 netMm10,26 netMm10,28 netMm10,33 netMm10,35 netMm10,103 netMm10,105 netMm10,234 netMm10,236 netMm10,238 netMm10,240 netMm10,344 netMm10,346 netMm10,687 netMm10,689 netTarSyr2,26 netTarSyr2,28 netTarSyr2,33 netTarSyr2,35 netTarSyr2,103 netTarSyr2,105 netTarSyr2,234 netTarSyr2,236 netTarSyr2,238 netTarSyr2,240 netTarSyr2,344 netTarSyr2,346 netTarSyr2,687 netTarSyr2,689 rmsk,130 rmsk,133 rmsk,241 rmsk,242 rmsk,248 rmsk,250 rmsk,252 rmsk,254 rmsk,275 rmsk,276 windowmaskerSdust,82 windowmaskerSdust,84 r augustusGene,291 chainCalJac3,1054 chainCalJac3,1100 chainGorGor3,1051 chainGorGor3,1097 chainMm10,1051 chainMm10,1097 chainNetCalJac3,1057 chainNetCalJac3,1103 chainNetGorGor3,1054 chainNetGorGor3,1100 chainNetMm10,1054 chainNetMm10,1100 chainNetTarSyr2,1054 chainNetTarSyr2,1100 chainTarSyr2,1051 chainTarSyr2,1097 nestedRepeats,327 netCalJac3,1054 netCalJac3,1100 netGorGor3,1051 netGorGor3,1097 netMm10,1051 netMm10,1097 netTarSyr2,1051 netTarSyr2,1097 rmsk,350 windowmaskerSdust,99 r.s chainCalJac3,1019 chainGorGor3,1016 chainMm10,1016 chainNetCalJac3,1022 chainNetGorGor3,1019 chainNetMm10,1019 chainNetTarSyr2,1019 chainTarSyr2,1016 netCalJac3,1019 netGorGor3,1016 netMm10,1016 netTarSyr2,1016 random augustusGene,119 range gap,136 nestedRepeats,227 nestedRepeats,236 quality,47 ranked chainCalJac3,791 chainGorGor3,788 chainMm10,788 chainNetCalJac3,794 chainNetGorGor3,791 chainNetMm10,791 chainNetTarSyr2,791 chainTarSyr2,788 netCalJac3,791 netGorGor3,788 netMm10,788 netTarSyr2,788 rare cpgIslandExt,57 cpgIslandExt,118 cpgIslandExtUnmasked,60 cpgIslandExtUnmasked,121 cpgIslandSuper,57 cpgIslandSuper,118 ratio cpgIslandExt,273 cpgIslandExt,349 cpgIslandExt,362 cpgIslandExtUnmasked,276 cpgIslandExtUnmasked,352 cpgIslandExtUnmasked,365 cpgIslandSuper,273 cpgIslandSuper,349 cpgIslandSuper,362 rc chainCalJac3,1102 chainGorGor3,1099 chainMm10,1099 chainNetCalJac3,1105 chainNetGorGor3,1102 chainNetMm10,1102 chainNetTarSyr2,1102 chainTarSyr2,1099 netCalJac3,1102 netGorGor3,1099 netMm10,1099 netTarSyr2,1099 rmsk,200 read gap,95 rearrangement chainCalJac3,297 chainCalJac3,501 chainCalJac3,1067 chainGorGor3,295 chainGorGor3,498 chainGorGor3,1064 chainMm10,295 chainMm10,498 chainMm10,1064 chainNetCalJac3,300 chainNetCalJac3,504 chainNetCalJac3,1070 chainNetGorGor3,298 chainNetGorGor3,501 chainNetGorGor3,1067 chainNetMm10,298 chainNetMm10,501 chainNetMm10,1067 chainNetTarSyr2,298 chainNetTarSyr2,501 chainNetTarSyr2,1067 chainTarSyr2,295 chainTarSyr2,498 chainTarSyr2,1064 netCalJac3,297 netCalJac3,501 netCalJac3,1067 netGorGor3,295 netGorGor3,498 netGorGor3,1064 netMm10,295 netMm10,498 netMm10,1064 netTarSyr2,295 netTarSyr2,498 netTarSyr2,1064 rearrangements nestedRepeats,99 reason cpgIslandExt,136 cpgIslandExtUnmasked,139 cpgIslandSuper,136 record xenoRefGene,67 refer ensGene,42 ensemblGeneScaffold,87 genscan,144 reference xenoRefGene,31 xenoRefGene,347 xenoRefGene,369 references augustusGene,285 chainCalJac3,1017 chainGorGor3,1014 chainMm10,1014 chainNetCalJac3,1020 chainNetGorGor3,1017 chainNetMm10,1017 chainNetTarSyr2,1017 chainTarSyr2,1014 cpgIslandExt,603 cpgIslandExtUnmasked,606 cpgIslandSuper,603 ensGene,52 ensGene,167 ensemblGeneScaffold,95 ensemblGeneScaffold,106 genscan,152 genscan,179 microsat,113 mrna,463 nestedRepeats,66 nestedRepeats,323 netCalJac3,1017 netGorGor3,1014 netMm10,1014 netTarSyr2,1014 rmsk,102 rmsk,346 simpleRepeat,73 windowmaskerSdust,89 xenoRefGene,302 reflect quality,50 reflects rmsk,213 refseq xenoRefGene,2 xenoRefGene,5 xenoRefGene,34 xenoRefGene,66 xenoRefGene,300 xenoRefGene,342 xenoRefGene,371 region chainCalJac3,203 chainCalJac3,404 chainGorGor3,201 chainGorGor3,401 chainMm10,201 chainMm10,401 chainNetCalJac3,206 chainNetCalJac3,407 chainNetGorGor3,204 chainNetGorGor3,404 chainNetMm10,204 chainNetMm10,404 chainNetTarSyr2,204 chainNetTarSyr2,404 chainTarSyr2,201 chainTarSyr2,401 cpgIslandExt,129 cpgIslandExtUnmasked,132 cpgIslandSuper,129 netCalJac3,203 netCalJac3,404 netGorGor3,201 netGorGor3,401 netMm10,201 netMm10,401 netTarSyr2,201 netTarSyr2,401 regions augustusGene,76 chainCalJac3,17 chainCalJac3,138 chainCalJac3,290 chainGorGor3,16 chainGorGor3,136 chainGorGor3,288 chainMm10,16 chainMm10,136 chainMm10,288 chainNetCalJac3,20 chainNetCalJac3,141 chainNetCalJac3,293 chainNetGorGor3,19 chainNetGorGor3,139 chainNetGorGor3,291 chainNetMm10,19 chainNetMm10,139 chainNetMm10,291 chainNetTarSyr2,19 chainNetTarSyr2,139 chainNetTarSyr2,291 chainTarSyr2,16 chainTarSyr2,136 chainTarSyr2,288 cpgIslandExt,41 cpgIslandExt,150 cpgIslandExt,182 cpgIslandExtUnmasked,44 cpgIslandExtUnmasked,153 cpgIslandExtUnmasked,185 cpgIslandSuper,41 cpgIslandSuper,150 cpgIslandSuper,182 genscan,48 microsat,14 netCalJac3,17 netCalJac3,138 netCalJac3,290 netGorGor3,16 netGorGor3,136 netGorGor3,288 netMm10,16 netMm10,136 netMm10,288 netTarSyr2,16 netTarSyr2,136 netTarSyr2,288 simpleRepeat,39 regulation cpgIslandExt,13 cpgIslandExt,143 cpgIslandExtUnmasked,16 cpgIslandExtUnmasked,146 cpgIslandSuper,13 cpgIslandSuper,143 related augustusGene,242 relationship chainCalJac3,857 chainGorGor3,854 chainMm10,854 chainNetCalJac3,860 chainNetGorGor3,857 chainNetMm10,857 chainNetTarSyr2,857 chainTarSyr2,854 netCalJac3,857 netGorGor3,854 netMm10,854 netTarSyr2,854 relative chainCalJac3,873 chainGorGor3,870 chainMm10,870 chainNetCalJac3,876 chainNetGorGor3,873 chainNetMm10,873 chainNetTarSyr2,873 chainTarSyr2,870 gap,79 gold,110 netCalJac3,873 netGorGor3,870 netMm10,870 netTarSyr2,870 relatively cpgIslandExt,117 cpgIslandExtUnmasked,120 cpgIslandSuper,117 relevant mrna,106 remaining chainCalJac3,696 chainGorGor3,693 chainMm10,693 chainNetCalJac3,699 chainNetGorGor3,696 chainNetMm10,696 chainNetTarSyr2,696 chainTarSyr2,693 netCalJac3,696 netGorGor3,693 netMm10,693 netTarSyr2,693 removed chainCalJac3,586 chainGorGor3,583 chainMm10,583 chainNetCalJac3,589 chainNetGorGor3,586 chainNetMm10,586 chainNetTarSyr2,586 chainTarSyr2,583 cpgIslandExt,331 cpgIslandExtUnmasked,334 cpgIslandSuper,331 netCalJac3,586 netGorGor3,583 netMm10,583 netTarSyr2,583 rmsk,279 repbase nestedRepeats,45 nestedRepeats,57 nestedRepeats,335 nestedRepeats,342 rmsk,81 rmsk,93 rmsk,114 rmsk,358 rmsk,365 repeat cpgIslandExt,181 cpgIslandExt,191 cpgIslandExtUnmasked,184 cpgIslandExtUnmasked,194 cpgIslandSuper,181 cpgIslandSuper,191 microsat,83 nestedRepeats,85 nestedRepeats,122 nestedRepeats,135 nestedRepeats,257 nestedRepeats,316 rmsk,168 rmsk,175 rmsk,227 rmsk,339 simpleRepeat,47 repeating rmsk,2 repeatmasker chainCalJac3,954 chainGorGor3,951 chainMm10,951 chainNetCalJac3,957 chainNetGorGor3,954 chainNetMm10,954 chainNetTarSyr2,954 chainTarSyr2,951 nestedRepeats,9 nestedRepeats,29 nestedRepeats,73 nestedRepeats,77 nestedRepeats,109 nestedRepeats,254 nestedRepeats,285 nestedRepeats,330 netCalJac3,954 netGorGor3,951 netMm10,951 netTarSyr2,951 rmsk,1 rmsk,5 rmsk,19 rmsk,78 rmsk,292 rmsk,353 repeats chainCalJac3,946 chainGorGor3,943 chainMm10,943 chainNetCalJac3,949 chainNetGorGor3,946 chainNetMm10,946 chainNetTarSyr2,946 chainTarSyr2,943 microsat,6 microsat,9 microsat,35 microsat,58 microsat,63 microsat,86 microsat,93 microsat,106 microsat,117 nestedRepeats,6 nestedRepeats,13 nestedRepeats,22 nestedRepeats,37 nestedRepeats,49 nestedRepeats,95 nestedRepeats,366 nestedRepeats,374 nestedRepeats,401 netCalJac3,946 netGorGor3,943 netMm10,943 netTarSyr2,943 rmsk,8 rmsk,27 rmsk,41 rmsk,68 rmsk,85 rmsk,152 rmsk,179 rmsk,183 rmsk,185 rmsk,187 rmsk,196 rmsk,303 rmsk,310 rmsk,389 rmsk,397 rmsk,424 simpleRepeat,2 simpleRepeat,5 simpleRepeat,10 simpleRepeat,17 simpleRepeat,20 simpleRepeat,24 simpleRepeat,34 simpleRepeat,77 windowmaskerSdust,11 repeats.bed windowmaskerSdust,73 windowmaskerSdust,75 repetitive nestedRepeats,351 rmsk,374 represent chainCalJac3,136 chainCalJac3,164 chainCalJac3,451 chainCalJac3,456 chainGorGor3,134 chainGorGor3,162 chainGorGor3,448 chainGorGor3,453 chainMm10,134 chainMm10,162 chainMm10,448 chainMm10,453 chainNetCalJac3,139 chainNetCalJac3,167 chainNetCalJac3,454 chainNetCalJac3,459 chainNetGorGor3,137 chainNetGorGor3,165 chainNetGorGor3,451 chainNetGorGor3,456 chainNetMm10,137 chainNetMm10,165 chainNetMm10,451 chainNetMm10,456 chainNetTarSyr2,137 chainNetTarSyr2,165 chainNetTarSyr2,451 chainNetTarSyr2,456 chainTarSyr2,134 chainTarSyr2,162 chainTarSyr2,448 chainTarSyr2,453 netCalJac3,136 netCalJac3,164 netCalJac3,451 netCalJac3,456 netGorGor3,134 netGorGor3,162 netGorGor3,448 netGorGor3,453 netMm10,134 netMm10,162 netMm10,448 netMm10,453 netTarSyr2,134 netTarSyr2,162 netTarSyr2,448 netTarSyr2,453 representation quality,100 represented gap,70 rmsk,49 representing gap,113 res chainCalJac3,1112 chainGorGor3,1109 chainMm10,1109 chainNetCalJac3,1115 chainNetGorGor3,1112 chainNetMm10,1112 chainNetTarSyr2,1112 chainTarSyr2,1109 ensGene,197 ensemblGeneScaffold,136 microsat,127 mrna,481 mrna,506 mrna,526 netCalJac3,1112 netGorGor3,1109 netMm10,1109 netTarSyr2,1109 simpleRepeat,87 xenoRefGene,310 xenoRefGene,351 xenoRefGene,384 research nestedRepeats,54 rmsk,90 rest cpgIslandExt,518 cpgIslandExtUnmasked,521 cpgIslandSuper,518 ensGene,108 result chainCalJac3,177 chainGorGor3,175 chainMm10,175 chainNetCalJac3,180 chainNetGorGor3,178 chainNetMm10,178 chainNetTarSyr2,178 chainTarSyr2,175 cpgIslandExt,112 cpgIslandExtUnmasked,115 cpgIslandSuper,112 netCalJac3,177 netGorGor3,175 netMm10,175 netTarSyr2,175 resulting chainCalJac3,605 chainGorGor3,602 chainMm10,602 chainNetCalJac3,608 chainNetGorGor3,605 chainNetMm10,605 chainNetTarSyr2,605 chainTarSyr2,602 netCalJac3,605 netGorGor3,602 netMm10,602 netTarSyr2,602 retroposons rmsk,173 review xenoRefGene,64 reviewed xenoRefGene,74 rna rmsk,186 rmsk,189 xenoRefGene,30 xenoRefGene,242 xenoRefGene,288 rnas xenoRefGene,219 robert chainCalJac3,994 chainGorGor3,991 chainMm10,991 chainNetCalJac3,997 chainNetGorGor3,994 chainNetMm10,994 chainNetTarSyr2,994 chainTarSyr2,991 nestedRepeats,307 netCalJac3,994 netGorGor3,991 netMm10,991 netTarSyr2,991 rmsk,330 rolling rmsk,201 ross chainCalJac3,943 chainGorGor3,940 chainMm10,940 chainNetCalJac3,946 chainNetGorGor3,943 chainNetMm10,943 chainNetTarSyr2,943 chainTarSyr2,940 netCalJac3,943 netGorGor3,940 netMm10,940 netTarSyr2,940 row nestedRepeats,179 rpts nestedRepeats,2 rrna rmsk,191 run chainCalJac3,659 chainGorGor3,656 chainMm10,656 chainNetCalJac3,662 chainNetGorGor3,659 chainNetMm10,659 chainNetTarSyr2,659 chainTarSyr2,656 netCalJac3,659 netGorGor3,656 netMm10,656 netTarSyr2,656 windowmaskerSdust,53 s augustusGene,104 augustusGene,221 augustusGene,319 chainCalJac3,1062 chainCalJac3,1079 chainCalJac3,1092 chainGorGor3,1059 chainGorGor3,1076 chainGorGor3,1089 chainMm10,1059 chainMm10,1076 chainMm10,1089 chainNetCalJac3,1065 chainNetCalJac3,1082 chainNetCalJac3,1095 chainNetGorGor3,1062 chainNetGorGor3,1079 chainNetGorGor3,1092 chainNetMm10,1062 chainNetMm10,1079 chainNetMm10,1092 chainNetTarSyr2,1062 chainNetTarSyr2,1079 chainNetTarSyr2,1092 chainTarSyr2,1059 chainTarSyr2,1076 chainTarSyr2,1089 cpgIslandExt,436 cpgIslandExt,440 cpgIslandExt,442 cpgIslandExt,443 cpgIslandExt,445 cpgIslandExt,447 cpgIslandExt,453 cpgIslandExt,455 cpgIslandExtUnmasked,439 cpgIslandExtUnmasked,443 cpgIslandExtUnmasked,445 cpgIslandExtUnmasked,446 cpgIslandExtUnmasked,448 cpgIslandExtUnmasked,450 cpgIslandExtUnmasked,456 cpgIslandExtUnmasked,458 cpgIslandSuper,436 cpgIslandSuper,440 cpgIslandSuper,442 cpgIslandSuper,443 cpgIslandSuper,445 cpgIslandSuper,447 cpgIslandSuper,453 cpgIslandSuper,455 genscan,190 genscan,194 genscan,210 nestedRepeats,286 netCalJac3,1062 netCalJac3,1079 netCalJac3,1092 netGorGor3,1059 netGorGor3,1076 netGorGor3,1089 netMm10,1059 netMm10,1076 netMm10,1089 netTarSyr2,1059 netTarSyr2,1076 netTarSyr2,1089 rmsk,18 rmsk,293 saccharomyces augustusGene,223 salzberg genscan,189 same chainCalJac3,530 chainCalJac3,545 chainGorGor3,527 chainGorGor3,542 chainMm10,527 chainMm10,542 chainNetCalJac3,533 chainNetCalJac3,548 chainNetGorGor3,530 chainNetGorGor3,545 chainNetMm10,530 chainNetMm10,545 chainNetTarSyr2,530 chainNetTarSyr2,545 chainTarSyr2,527 chainTarSyr2,542 nestedRepeats,143 netCalJac3,530 netCalJac3,545 netGorGor3,527 netGorGor3,542 netMm10,527 netMm10,542 netTarSyr2,527 netTarSyr2,542 sample augustusGene,133 sampling augustusGene,129 santa chainCalJac3,967 chainCalJac3,1012 chainGorGor3,964 chainGorGor3,1009 chainMm10,964 chainMm10,1009 chainNetCalJac3,970 chainNetCalJac3,1015 chainNetGorGor3,967 chainNetGorGor3,1012 chainNetMm10,967 chainNetMm10,1012 chainNetTarSyr2,967 chainNetTarSyr2,1012 chainTarSyr2,964 chainTarSyr2,1009 netCalJac3,967 netCalJac3,1012 netGorGor3,964 netGorGor3,1009 netMm10,964 netMm10,1009 netTarSyr2,964 netTarSyr2,1009 satellite rmsk,184 save cpgIslandExt,582 cpgIslandExtUnmasked,585 cpgIslandSuper,582 sayers mrna,476 scaffold ensemblGeneScaffold,5 ensemblGeneScaffold,19 ensemblGeneScaffold,42 ensemblGeneScaffold,55 gold,81 gold,119 scaffolds ensemblGeneScaffold,27 ensemblGeneScaffold,58 sch windowmaskerSdust,94 schwartz chainCalJac3,934 chainCalJac3,1091 chainGorGor3,931 chainGorGor3,1088 chainMm10,931 chainMm10,1088 chainNetCalJac3,937 chainNetCalJac3,1094 chainNetGorGor3,934 chainNetGorGor3,1091 chainNetMm10,934 chainNetMm10,1091 chainNetTarSyr2,934 chainNetTarSyr2,1091 chainTarSyr2,931 chainTarSyr2,1088 netCalJac3,934 netCalJac3,1091 netGorGor3,931 netGorGor3,1088 netMm10,931 netMm10,1088 netTarSyr2,931 netTarSyr2,1088 sci chainCalJac3,1077 chainGorGor3,1074 chainMm10,1074 chainNetCalJac3,1080 chainNetGorGor3,1077 chainNetMm10,1077 chainNetTarSyr2,1077 chainTarSyr2,1074 netCalJac3,1077 netGorGor3,1074 netMm10,1074 netTarSyr2,1074 science genscan,203 scientists mrna,461 xenoRefGene,293 score chainCalJac3,688 chainGorGor3,685 chainMm10,685 chainNetCalJac3,691 chainNetGorGor3,688 chainNetMm10,688 chainNetTarSyr2,688 chainTarSyr2,685 nestedRepeats,188 nestedRepeats,216 nestedRepeats,223 netCalJac3,688 netGorGor3,685 netMm10,685 netTarSyr2,685 quality,20 scores quality,2 quality,7 quality,14 quality,53 quality,88 scoring chainCalJac3,80 chainCalJac3,90 chainCalJac3,667 chainCalJac3,684 chainCalJac3,1039 chainGorGor3,78 chainGorGor3,88 chainGorGor3,664 chainGorGor3,681 chainGorGor3,1036 chainMm10,78 chainMm10,88 chainMm10,664 chainMm10,681 chainMm10,1036 chainNetCalJac3,83 chainNetCalJac3,93 chainNetCalJac3,670 chainNetCalJac3,687 chainNetCalJac3,1042 chainNetGorGor3,81 chainNetGorGor3,91 chainNetGorGor3,667 chainNetGorGor3,684 chainNetGorGor3,1039 chainNetMm10,81 chainNetMm10,91 chainNetMm10,667 chainNetMm10,684 chainNetMm10,1039 chainNetTarSyr2,81 chainNetTarSyr2,91 chainNetTarSyr2,667 chainNetTarSyr2,684 chainNetTarSyr2,1039 chainTarSyr2,78 chainTarSyr2,88 chainTarSyr2,664 chainTarSyr2,681 chainTarSyr2,1036 cpgIslandExt,238 cpgIslandExt,251 cpgIslandExtUnmasked,241 cpgIslandExtUnmasked,254 cpgIslandSuper,238 cpgIslandSuper,251 netCalJac3,80 netCalJac3,90 netCalJac3,667 netCalJac3,684 netCalJac3,1039 netGorGor3,78 netGorGor3,88 netGorGor3,664 netGorGor3,681 netGorGor3,1036 netMm10,78 netMm10,88 netMm10,664 netMm10,681 netMm10,1036 netTarSyr2,78 netTarSyr2,88 netTarSyr2,664 netTarSyr2,681 netTarSyr2,1036 scott chainCalJac3,933 chainGorGor3,930 chainMm10,930 chainNetCalJac3,936 chainNetGorGor3,933 chainNetMm10,933 chainNetTarSyr2,933 chainTarSyr2,930 netCalJac3,933 netGorGor3,930 netMm10,930 netTarSyr2,930 screens nestedRepeats,32 rmsk,22 scrna rmsk,193 sdust windowmaskerSdust,2 windowmaskerSdust,8 windowmaskerSdust,68 searching cpgIslandExt,230 cpgIslandExtUnmasked,233 cpgIslandSuper,230 searls genscan,191 section ensGene,53 ensemblGeneScaffold,96 genscan,153 nestedRepeats,67 rmsk,103 sections chainCalJac3,814 chainGorGor3,811 chainMm10,811 chainNetCalJac3,817 chainNetGorGor3,814 chainNetMm10,814 chainNetTarSyr2,814 chainTarSyr2,811 netCalJac3,814 netGorGor3,811 netMm10,811 netTarSyr2,811 see augustusGene,42 ensGene,25 ensGene,161 genscan,57 microsat,101 nestedRepeats,296 nestedRepeats,370 rmsk,319 rmsk,393 simpleRepeat,63 xenoRefGene,209 segment cpgIslandExt,254 cpgIslandExt,299 cpgIslandExtUnmasked,257 cpgIslandExtUnmasked,302 cpgIslandSuper,254 cpgIslandSuper,299 segments cpgIslandExt,252 cpgIslandExtUnmasked,255 cpgIslandSuper,252 ensemblGeneScaffold,38 select genscan,90 xenoRefGene,162 selected mrna,242 mrna,258 mrna,311 selecting microsat,60 selective cpgIslandExt,122 cpgIslandExtUnmasked,125 cpgIslandSuper,122 semi-markov augustusGene,117 sep chainCalJac3,1082 chainGorGor3,1079 chainMm10,1079 chainNetCalJac3,1085 chainNetGorGor3,1082 chainNetMm10,1082 chainNetTarSyr2,5 chainNetTarSyr2,69 chainNetTarSyr2,309 chainNetTarSyr2,1082 chainNetTarSyr2Viewchain,3 chainNetTarSyr2Viewnet,3 chainTarSyr2,4 chainTarSyr2,66 chainTarSyr2,306 chainTarSyr2,1079 nestedRepeats,356 netCalJac3,1082 netGorGor3,1079 netMm10,1079 netTarSyr2,4 netTarSyr2,66 netTarSyr2,306 netTarSyr2,1079 rmsk,379 separated mrna,213 seq_region.txt ensemblGeneScaffold,75 sequence augustusGene,32 augustusGene,70 chainCalJac3,171 chainCalJac3,300 chainCalJac3,1042 chainGorGor3,169 chainGorGor3,298 chainGorGor3,1039 chainMm10,169 chainMm10,298 chainMm10,1039 chainNetCalJac3,174 chainNetCalJac3,303 chainNetCalJac3,1045 chainNetGorGor3,172 chainNetGorGor3,301 chainNetGorGor3,1042 chainNetMm10,172 chainNetMm10,301 chainNetMm10,1042 chainNetTarSyr2,172 chainNetTarSyr2,301 chainNetTarSyr2,1042 chainTarSyr2,169 chainTarSyr2,298 chainTarSyr2,1039 cpgIslandExt,232 cpgIslandExt,303 cpgIslandExt,325 cpgIslandExt,329 cpgIslandExt,397 cpgIslandExt,410 cpgIslandExtUnmasked,7 cpgIslandExtUnmasked,235 cpgIslandExtUnmasked,306 cpgIslandExtUnmasked,328 cpgIslandExtUnmasked,332 cpgIslandExtUnmasked,400 cpgIslandExtUnmasked,413 cpgIslandSuper,232 cpgIslandSuper,303 cpgIslandSuper,325 cpgIslandSuper,329 cpgIslandSuper,397 cpgIslandSuper,410 gap,55 gold,54 mrna,347 mrna,438 mrna,451 mrna,458 netCalJac3,171 netCalJac3,300 netCalJac3,1042 netGorGor3,169 netGorGor3,298 netGorGor3,1039 netMm10,169 netMm10,298 netMm10,1039 netTarSyr2,169 netTarSyr2,298 netTarSyr2,1039 rmsk,48 rmsk,62 windowmaskerSdust,17 xenoRefGene,277 xenoRefGene,289 xenoRefGene,370 xenoRefGene,375 sequenced windowmaskerSdust,104 sequences gold,13 microsat,26 microsat,124 nestedRepeats,34 nestedRepeats,42 rmsk,24 rmsk,32 simpleRepeat,84 xenoRefGene,32 xenoRefGene,348 sequencing chainCalJac3,896 chainGorGor3,893 chainMm10,893 chainNetCalJac3,899 chainNetGorGor3,896 chainNetMm10,896 chainNetTarSyr2,896 chainTarSyr2,893 cytoBandIdeo,9 ensemblGeneScaffold,9 gap,6 gc5Base,10 gold,7 netCalJac3,896 netGorGor3,893 netMm10,893 netTarSyr2,893 quality,5 quality,10 quality,18 server ensGene,144 servers cpgIslandExt,539 cpgIslandExtUnmasked,542 cpgIslandSuper,539 ensGene,116 sets augustusGene,158 settings cpgIslandExt,213 cpgIslandExtUnmasked,216 cpgIslandSuper,213 several mrna,365 shade nestedRepeats,194 shaded mrna,51 nestedRepeats,182 shades nestedRepeats,202 shading nestedRepeats,240 rmsk,208 rmsk,239 xenoRefGene,59 short rmsk,153 shotgun gap,130 gold,152 should mrna,278 show xenoRefGene,125 shown chainCalJac3,42 chainCalJac3,55 chainGorGor3,41 chainGorGor3,54 chainMm10,41 chainMm10,54 chainNetCalJac3,45 chainNetCalJac3,58 chainNetGorGor3,44 chainNetGorGor3,57 chainNetMm10,44 chainNetMm10,57 chainNetTarSyr2,44 chainNetTarSyr2,57 chainTarSyr2,41 chainTarSyr2,54 gold,102 microsat,48 mrna,96 netCalJac3,42 netCalJac3,55 netGorGor3,41 netGorGor3,54 netMm10,41 netMm10,54 netTarSyr2,41 netTarSyr2,54 shows augustusGene,15 augustusGene,108 chainCalJac3,16 chainCalJac3,63 chainCalJac3,269 chainGorGor3,15 chainGorGor3,62 chainGorGor3,267 chainMm10,15 chainMm10,62 chainMm10,267 chainNetCalJac3,19 chainNetCalJac3,66 chainNetCalJac3,272 chainNetGorGor3,18 chainNetGorGor3,65 chainNetGorGor3,270 chainNetMm10,18 chainNetMm10,65 chainNetMm10,270 chainNetTarSyr2,18 chainNetTarSyr2,65 chainNetTarSyr2,270 chainTarSyr2,15 chainTarSyr2,62 chainTarSyr2,267 ensemblGeneScaffold,13 gap,10 gc5Base,16 genscan,13 gold,11 mrna,16 nestedRepeats,17 nestedRepeats,81 netCalJac3,16 netCalJac3,63 netCalJac3,269 netGorGor3,15 netGorGor3,62 netGorGor3,267 netMm10,15 netMm10,62 netMm10,267 netTarSyr2,15 netTarSyr2,62 netTarSyr2,267 quality,16 xenoRefGene,14 side gap,88 signal augustusGene,48 augustusGene,63 signals genscan,34 genscan,187 significantly cpgIslandExt,156 cpgIslandExtUnmasked,159 cpgIslandSuper,156 signifies rmsk,258 similar nestedRepeats,199 simple microsat,57 microsat,85 rmsk,178 simpleRepeat,1 simpleRepeat,3 simpleRepeat,15 simultaneously chainCalJac3,103 chainGorGor3,101 chainMm10,101 chainNetCalJac3,106 chainNetGorGor3,104 chainNetMm10,104 chainNetTarSyr2,104 chainTarSyr2,101 netCalJac3,103 netGorGor3,101 netMm10,101 netTarSyr2,101 since chainCalJac3,579 chainGorGor3,576 chainMm10,576 chainNetCalJac3,582 chainNetGorGor3,579 chainNetMm10,579 chainNetTarSyr2,579 chainTarSyr2,576 netCalJac3,579 netGorGor3,576 netMm10,576 netTarSyr2,576 sine rmsk,157 single chainCalJac3,130 chainCalJac3,139 chainCalJac3,629 chainCalJac3,634 chainGorGor3,128 chainGorGor3,137 chainGorGor3,626 chainGorGor3,631 chainMm10,128 chainMm10,137 chainMm10,626 chainMm10,631 chainNetCalJac3,133 chainNetCalJac3,142 chainNetCalJac3,632 chainNetCalJac3,637 chainNetGorGor3,131 chainNetGorGor3,140 chainNetGorGor3,629 chainNetGorGor3,634 chainNetMm10,131 chainNetMm10,140 chainNetMm10,629 chainNetMm10,634 chainNetTarSyr2,131 chainNetTarSyr2,140 chainNetTarSyr2,629 chainNetTarSyr2,634 chainTarSyr2,128 chainTarSyr2,137 chainTarSyr2,626 chainTarSyr2,631 mrna,402 nestedRepeats,178 netCalJac3,130 netCalJac3,139 netCalJac3,629 netCalJac3,634 netGorGor3,128 netGorGor3,137 netGorGor3,626 netGorGor3,631 netMm10,128 netMm10,137 netMm10,626 netMm10,631 netTarSyr2,128 netTarSyr2,137 netTarSyr2,626 netTarSyr2,631 xenoRefGene,241 single-lined chainCalJac3,212 chainGorGor3,210 chainMm10,210 chainNetCalJac3,215 chainNetGorGor3,213 chainNetMm10,213 chainNetTarSyr2,213 chainTarSyr2,210 netCalJac3,212 netGorGor3,210 netMm10,210 netTarSyr2,210 site genscan,157 windowmaskerSdust,45 sites augustusGene,54 augustusGene,59 cpgIslandExt,34 cpgIslandExtUnmasked,37 cpgIslandSuper,34 size gap,135 sm xenoRefGene,325 smallsize chainCalJac3,714 chainGorGor3,711 chainMm10,711 chainNetCalJac3,717 chainNetGorGor3,714 chainNetMm10,714 chainNetTarSyr2,714 chainTarSyr2,711 netCalJac3,714 netGorGor3,711 netMm10,711 netTarSyr2,711 smit chainCalJac3,951 chainCalJac3,1095 chainGorGor3,948 chainGorGor3,1092 chainMm10,948 chainMm10,1092 chainNetCalJac3,954 chainNetCalJac3,1098 chainNetGorGor3,951 chainNetGorGor3,1095 chainNetMm10,951 chainNetMm10,1095 chainNetTarSyr2,951 chainNetTarSyr2,1095 chainTarSyr2,948 chainTarSyr2,1092 nestedRepeats,306 nestedRepeats,324 nestedRepeats,371 nestedRepeats,395 netCalJac3,951 netCalJac3,1095 netGorGor3,948 netGorGor3,1092 netMm10,948 netMm10,1092 netTarSyr2,948 netTarSyr2,1092 rmsk,17 rmsk,329 rmsk,347 rmsk,394 rmsk,418 snrna rmsk,192 so chainCalJac3,443 chainGorGor3,440 chainMm10,440 chainNetCalJac3,446 chainNetGorGor3,443 chainNetMm10,443 chainNetTarSyr2,443 chainTarSyr2,440 netCalJac3,443 netGorGor3,440 netMm10,440 netTarSyr2,440 soft-masked rmsk,305 software nestedRepeats,255 some cpgIslandExt,134 cpgIslandExtUnmasked,137 cpgIslandSuper,134 mrna,104 nestedRepeats,207 rmsk,105 rmsk,268 sometimes simpleRepeat,50 sort cpgIslandExt,483 cpgIslandExtUnmasked,486 cpgIslandSuper,483 sorted chainCalJac3,783 chainGorGor3,780 chainMm10,780 chainNetCalJac3,786 chainNetGorGor3,783 chainNetMm10,783 chainNetTarSyr2,783 chainTarSyr2,780 netCalJac3,783 netGorGor3,780 netMm10,780 netTarSyr2,780 source cpgIslandExt,555 cpgIslandExtUnmasked,558 cpgIslandSuper,555 windowmaskerSdust,33 space mrna,216 spaces gold,100 span chainCalJac3,402 chainGorGor3,399 chainMm10,399 chainNetCalJac3,405 chainNetGorGor3,402 chainNetMm10,402 chainNetTarSyr2,402 chainTarSyr2,399 netCalJac3,402 netGorGor3,399 netMm10,399 netTarSyr2,399 specialized simpleRepeat,29 species augustusGene,166 augustusGene,173 augustusGene,181 augustusGene,186 augustusGene,200 augustusGene,229 augustusGene,244 chainCalJac3,120 chainCalJac3,174 chainCalJac3,193 chainCalJac3,902 chainGorGor3,118 chainGorGor3,172 chainGorGor3,191 chainGorGor3,899 chainMm10,118 chainMm10,172 chainMm10,191 chainMm10,899 chainNetCalJac3,123 chainNetCalJac3,177 chainNetCalJac3,196 chainNetCalJac3,905 chainNetGorGor3,121 chainNetGorGor3,175 chainNetGorGor3,194 chainNetGorGor3,902 chainNetMm10,121 chainNetMm10,175 chainNetMm10,194 chainNetMm10,902 chainNetTarSyr2,121 chainNetTarSyr2,175 chainNetTarSyr2,194 chainNetTarSyr2,902 chainTarSyr2,118 chainTarSyr2,172 chainTarSyr2,191 chainTarSyr2,899 netCalJac3,120 netCalJac3,174 netCalJac3,193 netCalJac3,902 netGorGor3,118 netGorGor3,172 netGorGor3,191 netGorGor3,899 netMm10,118 netMm10,172 netMm10,191 netMm10,899 netTarSyr2,118 netTarSyr2,172 netTarSyr2,191 netTarSyr2,899 species-specific augustusGene,156 specific gap,34 gold,36 mrna,143 simpleRepeat,53 specification gap,60 gold,59 splice augustusGene,53 genscan,156 splicing augustusGene,123 genscan,33 genscan,186 split chainCalJac3,584 chainGorGor3,581 chainMm10,581 chainNetCalJac3,587 chainNetGorGor3,584 chainNetMm10,584 chainNetTarSyr2,584 chainTarSyr2,581 netCalJac3,584 netGorGor3,581 netMm10,581 netTarSyr2,581 spontaneous cpgIslandExt,109 cpgIslandExtUnmasked,112 cpgIslandSuper,109 squish nestedRepeats,159 src cpgIslandExt,564 cpgIslandExtUnmasked,567 cpgIslandSuper,564 srprna rmsk,194 stages cpgIslandExt,90 cpgIslandExtUnmasked,93 cpgIslandSuper,90 stanke augustusGene,103 augustusGene,251 augustusGene,284 augustusGene,286 augustusGene,316 start augustusGene,58 cpgIslandExt,33 cpgIslandExtUnmasked,36 cpgIslandSuper,33 state chainCalJac3,928 chainCalJac3,1031 chainGorGor3,925 chainGorGor3,1028 chainMm10,925 chainMm10,1028 chainNetCalJac3,931 chainNetCalJac3,1034 chainNetGorGor3,928 chainNetGorGor3,1031 chainNetMm10,928 chainNetMm10,1031 chainNetTarSyr2,928 chainNetTarSyr2,1031 chainTarSyr2,925 chainTarSyr2,1028 netCalJac3,928 netCalJac3,1031 netGorGor3,925 netGorGor3,1028 netMm10,925 netMm10,1028 netTarSyr2,925 netTarSyr2,1028 statistical augustusGene,47 stdin cpgIslandExt,415 cpgIslandExt,420 cpgIslandExtUnmasked,418 cpgIslandExtUnmasked,423 cpgIslandSuper,415 cpgIslandSuper,420 stdout cpgIslandExt,413 cpgIslandExt,417 cpgIslandExtUnmasked,416 cpgIslandExtUnmasked,420 cpgIslandSuper,413 cpgIslandSuper,417 stefanie augustusGene,267 storage chainCalJac3,985 chainGorGor3,982 chainMm10,982 chainNetCalJac3,988 chainNetGorGor3,985 chainNetMm10,985 chainNetTarSyr2,985 chainTarSyr2,982 netCalJac3,985 netGorGor3,982 netMm10,982 netTarSyr2,982 strand chainCalJac3,252 chainGorGor3,250 chainMm10,250 chainNetCalJac3,255 chainNetGorGor3,253 chainNetMm10,253 chainNetTarSyr2,253 chainTarSyr2,250 cpgIslandExt,80 cpgIslandExt,84 cpgIslandExtUnmasked,83 cpgIslandExtUnmasked,87 cpgIslandSuper,80 cpgIslandSuper,84 nestedRepeats,144 nestedRepeats,155 netCalJac3,252 netGorGor3,250 netMm10,250 netTarSyr2,250 structure augustusGene,113 structures augustusGene,164 genscan,215 studying chainCalJac3,295 chainGorGor3,293 chainMm10,293 chainNetCalJac3,298 chainNetGorGor3,296 chainNetMm10,296 chainNetTarSyr2,296 chainTarSyr2,293 netCalJac3,295 netGorGor3,293 netMm10,293 netTarSyr2,293 submitted mrna,453 submodel augustusGene,331 subsections chainCalJac3,649 chainGorGor3,646 chainMm10,646 chainNetCalJac3,652 chainNetGorGor3,649 chainNetMm10,649 chainNetTarSyr2,649 chainTarSyr2,646 netCalJac3,649 netGorGor3,646 netMm10,646 netTarSyr2,646 subset microsat,54 mrna,82 substantial chainCalJac3,170 chainGorGor3,168 chainMm10,168 chainNetCalJac3,173 chainNetGorGor3,171 chainNetMm10,171 chainNetTarSyr2,171 chainTarSyr2,168 netCalJac3,170 netGorGor3,168 netMm10,168 netTarSyr2,168 subtracks chainCalJac3,30 chainCalJac3,37 chainGorGor3,29 chainGorGor3,36 chainMm10,29 chainMm10,36 chainNetCalJac3,33 chainNetCalJac3,40 chainNetGorGor3,32 chainNetGorGor3,39 chainNetMm10,32 chainNetMm10,39 chainNetTarSyr2,32 chainNetTarSyr2,39 chainTarSyr2,29 chainTarSyr2,36 netCalJac3,30 netCalJac3,37 netGorGor3,29 netGorGor3,36 netMm10,29 netMm10,36 netTarSyr2,29 netTarSyr2,36 such chainCalJac3,863 chainGorGor3,860 chainMm10,860 chainNetCalJac3,866 chainNetGorGor3,863 chainNetMm10,863 chainNetTarSyr2,863 chainTarSyr2,860 cpgIslandExt,65 cpgIslandExtUnmasked,68 cpgIslandSuper,65 netCalJac3,863 netGorGor3,860 netMm10,860 netTarSyr2,860 suppl augustusGene,336 supported gap,93 symp chainCalJac3,1045 chainGorGor3,1042 chainMm10,1042 chainNetCalJac3,1048 chainNetGorGor3,1045 chainNetMm10,1045 chainNetTarSyr2,1045 chainTarSyr2,1042 netCalJac3,1045 netGorGor3,1042 netMm10,1042 netTarSyr2,1042 syn chainCalJac3,526 chainGorGor3,523 chainMm10,523 chainNetCalJac3,529 chainNetGorGor3,526 chainNetMm10,526 chainNetTarSyr2,526 chainTarSyr2,523 netCalJac3,526 netGorGor3,523 netMm10,523 netTarSyr2,523 syntenic chainCalJac3,289 chainCalJac3,870 chainGorGor3,287 chainGorGor3,867 chainMm10,287 chainMm10,867 chainNetCalJac3,292 chainNetCalJac3,873 chainNetGorGor3,290 chainNetGorGor3,870 chainNetMm10,290 chainNetMm10,870 chainNetTarSyr2,290 chainNetTarSyr2,870 chainTarSyr2,287 chainTarSyr2,867 netCalJac3,289 netCalJac3,870 netGorGor3,287 netGorGor3,867 netMm10,287 netMm10,867 netTarSyr2,287 netTarSyr2,867 syntenically augustusGene,297 synteny chainCalJac3,33 chainGorGor3,32 chainMm10,32 chainNetCalJac3,36 chainNetGorGor3,35 chainNetMm10,35 chainNetTarSyr2,35 chainTarSyr2,32 netCalJac3,33 netGorGor3,32 netMm10,32 netTarSyr2,32 synthesized cpgIslandExt,78 cpgIslandExtUnmasked,81 cpgIslandSuper,78 system chainCalJac3,81 chainGorGor3,79 chainMm10,79 chainNetCalJac3,84 chainNetGorGor3,82 chainNetMm10,82 chainNetTarSyr2,82 chainTarSyr2,79 netCalJac3,81 netGorGor3,79 netMm10,79 netTarSyr2,79 systems chainCalJac3,91 chainGorGor3,89 chainMm10,89 chainNetCalJac3,94 chainNetGorGor3,92 chainNetMm10,92 chainNetTarSyr2,92 chainTarSyr2,89 netCalJac3,91 netGorGor3,89 netMm10,89 netTarSyr2,89 t cpgIslandExt,437 cpgIslandExt,439 cpgIslandExt,441 cpgIslandExt,444 cpgIslandExt,446 cpgIslandExt,448 cpgIslandExt,450 cpgIslandExt,452 cpgIslandExt,454 cpgIslandExtUnmasked,440 cpgIslandExtUnmasked,442 cpgIslandExtUnmasked,444 cpgIslandExtUnmasked,447 cpgIslandExtUnmasked,449 cpgIslandExtUnmasked,451 cpgIslandExtUnmasked,453 cpgIslandExtUnmasked,455 cpgIslandExtUnmasked,457 cpgIslandSuper,437 cpgIslandSuper,439 cpgIslandSuper,441 cpgIslandSuper,444 cpgIslandSuper,446 cpgIslandSuper,448 cpgIslandSuper,450 cpgIslandSuper,452 cpgIslandSuper,454 ensGene,169 ensGene,181 ensGene,187 ensemblGeneScaffold,108 ensemblGeneScaffold,120 ensemblGeneScaffold,126 xenoRefGene,365 t-123-31-11491 chainCalJac3,682 chainMm10,679 chainNetCalJac3,685 chainNetMm10,682 netCalJac3,682 netMm10,679 t-137-29-170100 chainNetTarSyr2,682 chainTarSyr2,679 netTarSyr2,679 t-356-236-33090 chainGorGor3,679 chainNetGorGor3,682 netGorGor3,679 table augustusGene,225 cpgIslandExt,521 cpgIslandExtUnmasked,524 cpgIslandSuper,521 ensGene,66 mrna,168 mrna,171 mrna,190 windowmaskerSdust,85 tables cpgIslandExt,511 cpgIslandExt,529 cpgIslandExtUnmasked,514 cpgIslandExtUnmasked,532 cpgIslandSuper,511 cpgIslandSuper,529 ensemblGeneScaffold,72 tablesize chainCalJac3,712 chainGorGor3,709 chainMm10,709 chainNetCalJac3,715 chainNetGorGor3,712 chainNetMm10,712 chainNetTarSyr2,712 chainTarSyr2,709 netCalJac3,712 netGorGor3,709 netMm10,709 netTarSyr2,709 taken xenoRefGene,26 tandem microsat,92 microsat,105 microsat,116 simpleRepeat,4 simpleRepeat,16 simpleRepeat,23 simpleRepeat,76 tarsier chainNetTarSyr2,1 chainNetTarSyr2,4 chainNetTarSyr2,68 chainNetTarSyr2,100 chainNetTarSyr2,153 chainNetTarSyr2,273 chainNetTarSyr2,300 chainNetTarSyr2,581 chainNetTarSyr2,630 chainNetTarSyr2Viewchain,2 chainNetTarSyr2Viewnet,2 chainTarSyr2,1 chainTarSyr2,3 chainTarSyr2,65 chainTarSyr2,97 chainTarSyr2,150 chainTarSyr2,270 chainTarSyr2,297 chainTarSyr2,578 chainTarSyr2,627 netTarSyr2,1 netTarSyr2,3 netTarSyr2,65 netTarSyr2,97 netTarSyr2,150 netTarSyr2,270 netTarSyr2,297 netTarSyr2,578 netTarSyr2,627 tarsius_syrichta-2.0.1 chainNetTarSyr2,7 chainNetTarSyr2,71 chainNetTarSyr2,311 chainNetTarSyr2Viewchain,5 chainNetTarSyr2Viewnet,5 chainTarSyr2,6 chainTarSyr2,68 chainTarSyr2,308 netTarSyr2,6 netTarSyr2,68 netTarSyr2,308 tarsyr2 chainNetTarSyr2,8 chainNetTarSyr2,72 chainNetTarSyr2,312 chainNetTarSyr2Viewchain,6 chainNetTarSyr2Viewnet,6 chainTarSyr2,7 chainTarSyr2,69 chainTarSyr2,309 netTarSyr2,7 netTarSyr2,69 netTarSyr2,309 task mrna,110 tatusova xenoRefGene,364 temperature augustusGene,141 ten rmsk,148 tend cpgIslandExt,68 cpgIslandExt,102 cpgIslandExtUnmasked,71 cpgIslandExtUnmasked,105 cpgIslandSuper,68 cpgIslandSuper,102 microsat,37 term mrna,117 terminal rmsk,167 terms mrna,161 mrna,207 text mrna,124 mrna,164 mrna,204 tgap chainCalJac3,740 chainGorGor3,737 chainMm10,737 chainNetCalJac3,743 chainNetGorGor3,740 chainNetMm10,740 chainNetTarSyr2,740 chainTarSyr2,737 netCalJac3,740 netGorGor3,737 netMm10,737 netTarSyr2,737 than chainCalJac3,86 chainCalJac3,515 chainGorGor3,84 chainGorGor3,512 chainMm10,84 chainMm10,512 chainNetCalJac3,89 chainNetCalJac3,518 chainNetGorGor3,87 chainNetGorGor3,515 chainNetMm10,87 chainNetMm10,515 chainNetTarSyr2,87 chainNetTarSyr2,515 chainTarSyr2,84 chainTarSyr2,512 cpgIslandExt,159 cpgIslandExt,270 cpgIslandExt,275 cpgIslandExtUnmasked,162 cpgIslandExtUnmasked,273 cpgIslandExtUnmasked,278 cpgIslandSuper,159 cpgIslandSuper,270 cpgIslandSuper,275 mrna,229 nestedRepeats,213 nestedRepeats,271 netCalJac3,86 netCalJac3,515 netGorGor3,84 netGorGor3,512 netMm10,84 netMm10,512 netTarSyr2,84 netTarSyr2,512 xenoRefGene,23 xenoRefGene,235 thank ensGene,150 thanks augustusGene,248 ensemblGeneScaffold,99 genscan,170 nestedRepeats,303 rmsk,326 that chainCalJac3,21 chainCalJac3,46 chainCalJac3,82 chainCalJac3,143 chainCalJac3,168 chainCalJac3,374 chainCalJac3,401 chainCalJac3,423 chainCalJac3,575 chainCalJac3,833 chainCalJac3,844 chainGorGor3,20 chainGorGor3,45 chainGorGor3,80 chainGorGor3,141 chainGorGor3,166 chainGorGor3,371 chainGorGor3,398 chainGorGor3,420 chainGorGor3,572 chainGorGor3,830 chainGorGor3,841 chainMm10,20 chainMm10,45 chainMm10,80 chainMm10,141 chainMm10,166 chainMm10,371 chainMm10,398 chainMm10,420 chainMm10,572 chainMm10,830 chainMm10,841 chainNetCalJac3,24 chainNetCalJac3,49 chainNetCalJac3,85 chainNetCalJac3,146 chainNetCalJac3,171 chainNetCalJac3,377 chainNetCalJac3,404 chainNetCalJac3,426 chainNetCalJac3,578 chainNetCalJac3,836 chainNetCalJac3,847 chainNetGorGor3,23 chainNetGorGor3,48 chainNetGorGor3,83 chainNetGorGor3,144 chainNetGorGor3,169 chainNetGorGor3,374 chainNetGorGor3,401 chainNetGorGor3,423 chainNetGorGor3,575 chainNetGorGor3,833 chainNetGorGor3,844 chainNetMm10,23 chainNetMm10,48 chainNetMm10,83 chainNetMm10,144 chainNetMm10,169 chainNetMm10,374 chainNetMm10,401 chainNetMm10,423 chainNetMm10,575 chainNetMm10,833 chainNetMm10,844 chainNetTarSyr2,23 chainNetTarSyr2,48 chainNetTarSyr2,83 chainNetTarSyr2,144 chainNetTarSyr2,169 chainNetTarSyr2,374 chainNetTarSyr2,401 chainNetTarSyr2,423 chainNetTarSyr2,575 chainNetTarSyr2,833 chainNetTarSyr2,844 chainTarSyr2,20 chainTarSyr2,45 chainTarSyr2,80 chainTarSyr2,141 chainTarSyr2,166 chainTarSyr2,371 chainTarSyr2,398 chainTarSyr2,420 chainTarSyr2,572 chainTarSyr2,830 chainTarSyr2,841 cpgIslandExt,114 cpgIslandExt,178 cpgIslandExtUnmasked,117 cpgIslandExtUnmasked,181 cpgIslandSuper,114 cpgIslandSuper,178 ensemblGeneScaffold,43 genscan,141 gold,75 gold,145 microsat,15 mrna,47 mrna,66 mrna,173 mrna,197 mrna,245 mrna,260 mrna,277 mrna,301 mrna,319 mrna,336 nestedRepeats,265 nestedRepeats,273 netCalJac3,21 netCalJac3,46 netCalJac3,82 netCalJac3,143 netCalJac3,168 netCalJac3,374 netCalJac3,401 netCalJac3,423 netCalJac3,575 netCalJac3,833 netCalJac3,844 netGorGor3,20 netGorGor3,45 netGorGor3,80 netGorGor3,141 netGorGor3,166 netGorGor3,371 netGorGor3,398 netGorGor3,420 netGorGor3,572 netGorGor3,830 netGorGor3,841 netMm10,20 netMm10,45 netMm10,80 netMm10,141 netMm10,166 netMm10,371 netMm10,398 netMm10,420 netMm10,572 netMm10,830 netMm10,841 netTarSyr2,20 netTarSyr2,45 netTarSyr2,80 netTarSyr2,141 netTarSyr2,166 netTarSyr2,371 netTarSyr2,398 netTarSyr2,420 netTarSyr2,572 netTarSyr2,830 netTarSyr2,841 rmsk,42 rmsk,259 xenoRefGene,148 the augustusGene,20 augustusGene,25 augustusGene,30 augustusGene,38 augustusGene,61 augustusGene,69 augustusGene,81 augustusGene,109 augustusGene,143 augustusGene,165 augustusGene,172 augustusGene,177 augustusGene,185 augustusGene,240 augustusGene,250 augustusGene,255 augustusGene,258 augustusGene,261 augustusGene,272 augustusGene,275 chainCalJac3,19 chainCalJac3,38 chainCalJac3,60 chainCalJac3,73 chainCalJac3,121 chainCalJac3,134 chainCalJac3,151 chainCalJac3,158 chainCalJac3,205 chainCalJac3,209 chainCalJac3,235 chainCalJac3,245 chainCalJac3,250 chainCalJac3,258 chainCalJac3,266 chainCalJac3,270 chainCalJac3,280 chainCalJac3,298 chainCalJac3,307 chainCalJac3,322 chainCalJac3,337 chainCalJac3,343 chainCalJac3,346 chainCalJac3,361 chainCalJac3,367 chainCalJac3,371 chainCalJac3,391 chainCalJac3,397 chainCalJac3,411 chainCalJac3,429 chainCalJac3,446 chainCalJac3,449 chainCalJac3,454 chainCalJac3,467 chainCalJac3,480 chainCalJac3,482 chainCalJac3,489 chainCalJac3,492 chainCalJac3,499 chainCalJac3,505 chainCalJac3,518 chainCalJac3,529 chainCalJac3,533 chainCalJac3,536 chainCalJac3,544 chainCalJac3,548 chainCalJac3,554 chainCalJac3,565 chainCalJac3,568 chainCalJac3,580 chainCalJac3,588 chainCalJac3,590 chainCalJac3,598 chainCalJac3,604 chainCalJac3,613 chainCalJac3,616 chainCalJac3,647 chainCalJac3,652 chainCalJac3,661 chainCalJac3,665 chainCalJac3,672 chainCalJac3,695 chainCalJac3,703 chainCalJac3,773 chainCalJac3,777 chainCalJac3,785 chainCalJac3,789 chainCalJac3,793 chainCalJac3,801 chainCalJac3,846 chainCalJac3,856 chainCalJac3,875 chainCalJac3,878 chainCalJac3,890 chainCalJac3,914 chainCalJac3,956 chainCalJac3,962 chainCalJac3,980 chainCalJac3,987 chainCalJac3,999 chainCalJac3,1008 chainCalJac3,1029 chainCalJac3,1069 chainGorGor3,18 chainGorGor3,37 chainGorGor3,59 chainGorGor3,71 chainGorGor3,119 chainGorGor3,132 chainGorGor3,149 chainGorGor3,156 chainGorGor3,203 chainGorGor3,207 chainGorGor3,233 chainGorGor3,243 chainGorGor3,248 chainGorGor3,256 chainGorGor3,264 chainGorGor3,268 chainGorGor3,278 chainGorGor3,296 chainGorGor3,305 chainGorGor3,319 chainGorGor3,334 chainGorGor3,340 chainGorGor3,343 chainGorGor3,358 chainGorGor3,364 chainGorGor3,368 chainGorGor3,388 chainGorGor3,394 chainGorGor3,408 chainGorGor3,426 chainGorGor3,443 chainGorGor3,446 chainGorGor3,451 chainGorGor3,464 chainGorGor3,477 chainGorGor3,479 chainGorGor3,486 chainGorGor3,489 chainGorGor3,496 chainGorGor3,502 chainGorGor3,515 chainGorGor3,526 chainGorGor3,530 chainGorGor3,533 chainGorGor3,541 chainGorGor3,545 chainGorGor3,551 chainGorGor3,562 chainGorGor3,565 chainGorGor3,577 chainGorGor3,585 chainGorGor3,587 chainGorGor3,595 chainGorGor3,601 chainGorGor3,610 chainGorGor3,613 chainGorGor3,644 chainGorGor3,649 chainGorGor3,658 chainGorGor3,662 chainGorGor3,669 chainGorGor3,692 chainGorGor3,700 chainGorGor3,770 chainGorGor3,774 chainGorGor3,782 chainGorGor3,786 chainGorGor3,790 chainGorGor3,798 chainGorGor3,843 chainGorGor3,853 chainGorGor3,872 chainGorGor3,875 chainGorGor3,887 chainGorGor3,911 chainGorGor3,953 chainGorGor3,959 chainGorGor3,977 chainGorGor3,984 chainGorGor3,996 chainGorGor3,1005 chainGorGor3,1026 chainGorGor3,1066 chainMm10,18 chainMm10,37 chainMm10,59 chainMm10,71 chainMm10,119 chainMm10,132 chainMm10,149 chainMm10,156 chainMm10,203 chainMm10,207 chainMm10,233 chainMm10,243 chainMm10,248 chainMm10,256 chainMm10,264 chainMm10,268 chainMm10,278 chainMm10,296 chainMm10,305 chainMm10,319 chainMm10,334 chainMm10,340 chainMm10,343 chainMm10,358 chainMm10,364 chainMm10,368 chainMm10,388 chainMm10,394 chainMm10,408 chainMm10,426 chainMm10,443 chainMm10,446 chainMm10,451 chainMm10,464 chainMm10,477 chainMm10,479 chainMm10,486 chainMm10,489 chainMm10,496 chainMm10,502 chainMm10,515 chainMm10,526 chainMm10,530 chainMm10,533 chainMm10,541 chainMm10,545 chainMm10,551 chainMm10,562 chainMm10,565 chainMm10,577 chainMm10,585 chainMm10,587 chainMm10,595 chainMm10,601 chainMm10,610 chainMm10,613 chainMm10,644 chainMm10,649 chainMm10,658 chainMm10,662 chainMm10,669 chainMm10,692 chainMm10,700 chainMm10,770 chainMm10,774 chainMm10,782 chainMm10,786 chainMm10,790 chainMm10,798 chainMm10,843 chainMm10,853 chainMm10,872 chainMm10,875 chainMm10,887 chainMm10,911 chainMm10,953 chainMm10,959 chainMm10,977 chainMm10,984 chainMm10,996 chainMm10,1005 chainMm10,1026 chainMm10,1066 chainNetCalJac3,22 chainNetCalJac3,41 chainNetCalJac3,63 chainNetCalJac3,76 chainNetCalJac3,124 chainNetCalJac3,137 chainNetCalJac3,154 chainNetCalJac3,161 chainNetCalJac3,208 chainNetCalJac3,212 chainNetCalJac3,238 chainNetCalJac3,248 chainNetCalJac3,253 chainNetCalJac3,261 chainNetCalJac3,269 chainNetCalJac3,273 chainNetCalJac3,283 chainNetCalJac3,301 chainNetCalJac3,310 chainNetCalJac3,325 chainNetCalJac3,340 chainNetCalJac3,346 chainNetCalJac3,349 chainNetCalJac3,364 chainNetCalJac3,370 chainNetCalJac3,374 chainNetCalJac3,394 chainNetCalJac3,400 chainNetCalJac3,414 chainNetCalJac3,432 chainNetCalJac3,449 chainNetCalJac3,452 chainNetCalJac3,457 chainNetCalJac3,470 chainNetCalJac3,483 chainNetCalJac3,485 chainNetCalJac3,492 chainNetCalJac3,495 chainNetCalJac3,502 chainNetCalJac3,508 chainNetCalJac3,521 chainNetCalJac3,532 chainNetCalJac3,536 chainNetCalJac3,539 chainNetCalJac3,547 chainNetCalJac3,551 chainNetCalJac3,557 chainNetCalJac3,568 chainNetCalJac3,571 chainNetCalJac3,583 chainNetCalJac3,591 chainNetCalJac3,593 chainNetCalJac3,601 chainNetCalJac3,607 chainNetCalJac3,616 chainNetCalJac3,619 chainNetCalJac3,650 chainNetCalJac3,655 chainNetCalJac3,664 chainNetCalJac3,668 chainNetCalJac3,675 chainNetCalJac3,698 chainNetCalJac3,706 chainNetCalJac3,776 chainNetCalJac3,780 chainNetCalJac3,788 chainNetCalJac3,792 chainNetCalJac3,796 chainNetCalJac3,804 chainNetCalJac3,849 chainNetCalJac3,859 chainNetCalJac3,878 chainNetCalJac3,881 chainNetCalJac3,893 chainNetCalJac3,917 chainNetCalJac3,959 chainNetCalJac3,965 chainNetCalJac3,983 chainNetCalJac3,990 chainNetCalJac3,1002 chainNetCalJac3,1011 chainNetCalJac3,1032 chainNetCalJac3,1072 chainNetGorGor3,21 chainNetGorGor3,40 chainNetGorGor3,62 chainNetGorGor3,74 chainNetGorGor3,122 chainNetGorGor3,135 chainNetGorGor3,152 chainNetGorGor3,159 chainNetGorGor3,206 chainNetGorGor3,210 chainNetGorGor3,236 chainNetGorGor3,246 chainNetGorGor3,251 chainNetGorGor3,259 chainNetGorGor3,267 chainNetGorGor3,271 chainNetGorGor3,281 chainNetGorGor3,299 chainNetGorGor3,308 chainNetGorGor3,322 chainNetGorGor3,337 chainNetGorGor3,343 chainNetGorGor3,346 chainNetGorGor3,361 chainNetGorGor3,367 chainNetGorGor3,371 chainNetGorGor3,391 chainNetGorGor3,397 chainNetGorGor3,411 chainNetGorGor3,429 chainNetGorGor3,446 chainNetGorGor3,449 chainNetGorGor3,454 chainNetGorGor3,467 chainNetGorGor3,480 chainNetGorGor3,482 chainNetGorGor3,489 chainNetGorGor3,492 chainNetGorGor3,499 chainNetGorGor3,505 chainNetGorGor3,518 chainNetGorGor3,529 chainNetGorGor3,533 chainNetGorGor3,536 chainNetGorGor3,544 chainNetGorGor3,548 chainNetGorGor3,554 chainNetGorGor3,565 chainNetGorGor3,568 chainNetGorGor3,580 chainNetGorGor3,588 chainNetGorGor3,590 chainNetGorGor3,598 chainNetGorGor3,604 chainNetGorGor3,613 chainNetGorGor3,616 chainNetGorGor3,647 chainNetGorGor3,652 chainNetGorGor3,661 chainNetGorGor3,665 chainNetGorGor3,672 chainNetGorGor3,695 chainNetGorGor3,703 chainNetGorGor3,773 chainNetGorGor3,777 chainNetGorGor3,785 chainNetGorGor3,789 chainNetGorGor3,793 chainNetGorGor3,801 chainNetGorGor3,846 chainNetGorGor3,856 chainNetGorGor3,875 chainNetGorGor3,878 chainNetGorGor3,890 chainNetGorGor3,914 chainNetGorGor3,956 chainNetGorGor3,962 chainNetGorGor3,980 chainNetGorGor3,987 chainNetGorGor3,999 chainNetGorGor3,1008 chainNetGorGor3,1029 chainNetGorGor3,1069 chainNetMm10,21 chainNetMm10,40 chainNetMm10,62 chainNetMm10,74 chainNetMm10,122 chainNetMm10,135 chainNetMm10,152 chainNetMm10,159 chainNetMm10,206 chainNetMm10,210 chainNetMm10,236 chainNetMm10,246 chainNetMm10,251 chainNetMm10,259 chainNetMm10,267 chainNetMm10,271 chainNetMm10,281 chainNetMm10,299 chainNetMm10,308 chainNetMm10,322 chainNetMm10,337 chainNetMm10,343 chainNetMm10,346 chainNetMm10,361 chainNetMm10,367 chainNetMm10,371 chainNetMm10,391 chainNetMm10,397 chainNetMm10,411 chainNetMm10,429 chainNetMm10,446 chainNetMm10,449 chainNetMm10,454 chainNetMm10,467 chainNetMm10,480 chainNetMm10,482 chainNetMm10,489 chainNetMm10,492 chainNetMm10,499 chainNetMm10,505 chainNetMm10,518 chainNetMm10,529 chainNetMm10,533 chainNetMm10,536 chainNetMm10,544 chainNetMm10,548 chainNetMm10,554 chainNetMm10,565 chainNetMm10,568 chainNetMm10,580 chainNetMm10,588 chainNetMm10,590 chainNetMm10,598 chainNetMm10,604 chainNetMm10,613 chainNetMm10,616 chainNetMm10,647 chainNetMm10,652 chainNetMm10,661 chainNetMm10,665 chainNetMm10,672 chainNetMm10,695 chainNetMm10,703 chainNetMm10,773 chainNetMm10,777 chainNetMm10,785 chainNetMm10,789 chainNetMm10,793 chainNetMm10,801 chainNetMm10,846 chainNetMm10,856 chainNetMm10,875 chainNetMm10,878 chainNetMm10,890 chainNetMm10,914 chainNetMm10,956 chainNetMm10,962 chainNetMm10,980 chainNetMm10,987 chainNetMm10,999 chainNetMm10,1008 chainNetMm10,1029 chainNetMm10,1069 chainNetTarSyr2,21 chainNetTarSyr2,40 chainNetTarSyr2,62 chainNetTarSyr2,74 chainNetTarSyr2,122 chainNetTarSyr2,135 chainNetTarSyr2,152 chainNetTarSyr2,159 chainNetTarSyr2,206 chainNetTarSyr2,210 chainNetTarSyr2,236 chainNetTarSyr2,246 chainNetTarSyr2,251 chainNetTarSyr2,259 chainNetTarSyr2,267 chainNetTarSyr2,271 chainNetTarSyr2,281 chainNetTarSyr2,299 chainNetTarSyr2,308 chainNetTarSyr2,322 chainNetTarSyr2,337 chainNetTarSyr2,343 chainNetTarSyr2,346 chainNetTarSyr2,361 chainNetTarSyr2,367 chainNetTarSyr2,371 chainNetTarSyr2,391 chainNetTarSyr2,397 chainNetTarSyr2,411 chainNetTarSyr2,429 chainNetTarSyr2,446 chainNetTarSyr2,449 chainNetTarSyr2,454 chainNetTarSyr2,467 chainNetTarSyr2,480 chainNetTarSyr2,482 chainNetTarSyr2,489 chainNetTarSyr2,492 chainNetTarSyr2,499 chainNetTarSyr2,505 chainNetTarSyr2,518 chainNetTarSyr2,529 chainNetTarSyr2,533 chainNetTarSyr2,536 chainNetTarSyr2,544 chainNetTarSyr2,548 chainNetTarSyr2,554 chainNetTarSyr2,565 chainNetTarSyr2,568 chainNetTarSyr2,580 chainNetTarSyr2,588 chainNetTarSyr2,590 chainNetTarSyr2,598 chainNetTarSyr2,604 chainNetTarSyr2,613 chainNetTarSyr2,616 chainNetTarSyr2,647 chainNetTarSyr2,652 chainNetTarSyr2,661 chainNetTarSyr2,665 chainNetTarSyr2,672 chainNetTarSyr2,695 chainNetTarSyr2,703 chainNetTarSyr2,773 chainNetTarSyr2,777 chainNetTarSyr2,785 chainNetTarSyr2,789 chainNetTarSyr2,793 chainNetTarSyr2,801 chainNetTarSyr2,846 chainNetTarSyr2,856 chainNetTarSyr2,875 chainNetTarSyr2,878 chainNetTarSyr2,890 chainNetTarSyr2,914 chainNetTarSyr2,956 chainNetTarSyr2,962 chainNetTarSyr2,980 chainNetTarSyr2,987 chainNetTarSyr2,999 chainNetTarSyr2,1008 chainNetTarSyr2,1029 chainNetTarSyr2,1069 chainTarSyr2,18 chainTarSyr2,37 chainTarSyr2,59 chainTarSyr2,71 chainTarSyr2,119 chainTarSyr2,132 chainTarSyr2,149 chainTarSyr2,156 chainTarSyr2,203 chainTarSyr2,207 chainTarSyr2,233 chainTarSyr2,243 chainTarSyr2,248 chainTarSyr2,256 chainTarSyr2,264 chainTarSyr2,268 chainTarSyr2,278 chainTarSyr2,296 chainTarSyr2,305 chainTarSyr2,319 chainTarSyr2,334 chainTarSyr2,340 chainTarSyr2,343 chainTarSyr2,358 chainTarSyr2,364 chainTarSyr2,368 chainTarSyr2,388 chainTarSyr2,394 chainTarSyr2,408 chainTarSyr2,426 chainTarSyr2,443 chainTarSyr2,446 chainTarSyr2,451 chainTarSyr2,464 chainTarSyr2,477 chainTarSyr2,479 chainTarSyr2,486 chainTarSyr2,489 chainTarSyr2,496 chainTarSyr2,502 chainTarSyr2,515 chainTarSyr2,526 chainTarSyr2,530 chainTarSyr2,533 chainTarSyr2,541 chainTarSyr2,545 chainTarSyr2,551 chainTarSyr2,562 chainTarSyr2,565 chainTarSyr2,577 chainTarSyr2,585 chainTarSyr2,587 chainTarSyr2,595 chainTarSyr2,601 chainTarSyr2,610 chainTarSyr2,613 chainTarSyr2,644 chainTarSyr2,649 chainTarSyr2,658 chainTarSyr2,662 chainTarSyr2,669 chainTarSyr2,692 chainTarSyr2,700 chainTarSyr2,770 chainTarSyr2,774 chainTarSyr2,782 chainTarSyr2,786 chainTarSyr2,790 chainTarSyr2,798 chainTarSyr2,843 chainTarSyr2,853 chainTarSyr2,872 chainTarSyr2,875 chainTarSyr2,887 chainTarSyr2,911 chainTarSyr2,953 chainTarSyr2,959 chainTarSyr2,977 chainTarSyr2,984 chainTarSyr2,996 chainTarSyr2,1005 chainTarSyr2,1026 chainTarSyr2,1066 cpgIslandExt,62 cpgIslandExt,76 cpgIslandExt,82 cpgIslandExt,88 cpgIslandExt,111 cpgIslandExt,142 cpgIslandExt,163 cpgIslandExt,168 cpgIslandExt,172 cpgIslandExt,190 cpgIslandExt,197 cpgIslandExt,201 cpgIslandExt,207 cpgIslandExt,211 cpgIslandExt,215 cpgIslandExt,219 cpgIslandExt,231 cpgIslandExt,259 cpgIslandExt,284 cpgIslandExt,288 cpgIslandExt,291 cpgIslandExt,298 cpgIslandExt,300 cpgIslandExt,310 cpgIslandExt,313 cpgIslandExt,317 cpgIslandExt,324 cpgIslandExt,332 cpgIslandExt,336 cpgIslandExt,342 cpgIslandExt,344 cpgIslandExt,348 cpgIslandExt,355 cpgIslandExt,359 cpgIslandExt,361 cpgIslandExt,372 cpgIslandExt,398 cpgIslandExt,401 cpgIslandExt,407 cpgIslandExt,490 cpgIslandExt,501 cpgIslandExt,517 cpgIslandExt,520 cpgIslandExt,524 cpgIslandExt,528 cpgIslandExt,554 cpgIslandExt,557 cpgIslandExt,567 cpgIslandExtUnmasked,65 cpgIslandExtUnmasked,79 cpgIslandExtUnmasked,85 cpgIslandExtUnmasked,91 cpgIslandExtUnmasked,114 cpgIslandExtUnmasked,145 cpgIslandExtUnmasked,166 cpgIslandExtUnmasked,171 cpgIslandExtUnmasked,175 cpgIslandExtUnmasked,193 cpgIslandExtUnmasked,200 cpgIslandExtUnmasked,204 cpgIslandExtUnmasked,210 cpgIslandExtUnmasked,214 cpgIslandExtUnmasked,218 cpgIslandExtUnmasked,222 cpgIslandExtUnmasked,234 cpgIslandExtUnmasked,262 cpgIslandExtUnmasked,287 cpgIslandExtUnmasked,291 cpgIslandExtUnmasked,294 cpgIslandExtUnmasked,301 cpgIslandExtUnmasked,303 cpgIslandExtUnmasked,313 cpgIslandExtUnmasked,316 cpgIslandExtUnmasked,320 cpgIslandExtUnmasked,327 cpgIslandExtUnmasked,335 cpgIslandExtUnmasked,339 cpgIslandExtUnmasked,345 cpgIslandExtUnmasked,347 cpgIslandExtUnmasked,351 cpgIslandExtUnmasked,358 cpgIslandExtUnmasked,362 cpgIslandExtUnmasked,364 cpgIslandExtUnmasked,375 cpgIslandExtUnmasked,401 cpgIslandExtUnmasked,404 cpgIslandExtUnmasked,410 cpgIslandExtUnmasked,493 cpgIslandExtUnmasked,504 cpgIslandExtUnmasked,520 cpgIslandExtUnmasked,523 cpgIslandExtUnmasked,527 cpgIslandExtUnmasked,531 cpgIslandExtUnmasked,557 cpgIslandExtUnmasked,560 cpgIslandExtUnmasked,570 cpgIslandSuper,62 cpgIslandSuper,76 cpgIslandSuper,82 cpgIslandSuper,88 cpgIslandSuper,111 cpgIslandSuper,142 cpgIslandSuper,163 cpgIslandSuper,168 cpgIslandSuper,172 cpgIslandSuper,190 cpgIslandSuper,197 cpgIslandSuper,201 cpgIslandSuper,207 cpgIslandSuper,211 cpgIslandSuper,215 cpgIslandSuper,219 cpgIslandSuper,231 cpgIslandSuper,259 cpgIslandSuper,284 cpgIslandSuper,288 cpgIslandSuper,291 cpgIslandSuper,298 cpgIslandSuper,300 cpgIslandSuper,310 cpgIslandSuper,313 cpgIslandSuper,317 cpgIslandSuper,324 cpgIslandSuper,332 cpgIslandSuper,336 cpgIslandSuper,342 cpgIslandSuper,344 cpgIslandSuper,348 cpgIslandSuper,355 cpgIslandSuper,359 cpgIslandSuper,361 cpgIslandSuper,372 cpgIslandSuper,398 cpgIslandSuper,401 cpgIslandSuper,407 cpgIslandSuper,490 cpgIslandSuper,501 cpgIslandSuper,517 cpgIslandSuper,520 cpgIslandSuper,524 cpgIslandSuper,528 cpgIslandSuper,554 cpgIslandSuper,557 cpgIslandSuper,567 ensGene,21 ensGene,34 ensGene,51 ensGene,65 ensGene,69 ensGene,75 ensGene,101 ensGene,107 ensGene,190 ensemblGeneScaffold,14 ensemblGeneScaffold,22 ensemblGeneScaffold,40 ensemblGeneScaffold,51 ensemblGeneScaffold,69 ensemblGeneScaffold,80 ensemblGeneScaffold,94 ensemblGeneScaffold,129 gap,11 gap,14 gap,27 gap,39 gap,42 gap,49 gap,54 gap,56 gap,62 gap,65 gap,78 gap,84 gap,90 gap,110 gap,114 gap,119 gc5Base,12 gc5Base,17 gc5Base,53 gc5Base,57 gc5Base,68 gc5Base,72 genscan,16 genscan,23 genscan,38 genscan,53 genscan,68 genscan,75 genscan,80 genscan,91 genscan,115 genscan,135 genscan,139 genscan,151 genscan,155 genscan,176 gold,12 gold,16 gold,29 gold,41 gold,48 gold,53 gold,55 gold,61 gold,64 gold,73 gold,78 gold,87 gold,104 gold,109 gold,115 gold,129 gold,134 microsat,43 microsat,46 microsat,56 microsat,82 microsat,84 microsat,91 mrna,13 mrna,25 mrna,34 mrna,45 mrna,57 mrna,72 mrna,76 mrna,86 mrna,98 mrna,108 mrna,113 mrna,123 mrna,128 mrna,135 mrna,146 mrna,149 mrna,152 mrna,157 mrna,167 mrna,170 mrna,176 mrna,186 mrna,193 mrna,202 mrna,223 mrna,233 mrna,265 mrna,272 mrna,286 mrna,295 mrna,303 mrna,312 mrna,321 mrna,338 mrna,345 mrna,356 mrna,379 mrna,394 mrna,397 mrna,408 mrna,411 mrna,427 mrna,436 mrna,442 mrna,455 mrna,521 nestedRepeats,25 nestedRepeats,28 nestedRepeats,44 nestedRepeats,51 nestedRepeats,65 nestedRepeats,69 nestedRepeats,76 nestedRepeats,100 nestedRepeats,105 nestedRepeats,134 nestedRepeats,142 nestedRepeats,149 nestedRepeats,154 nestedRepeats,185 nestedRepeats,193 nestedRepeats,201 nestedRepeats,215 nestedRepeats,220 nestedRepeats,235 nestedRepeats,242 nestedRepeats,248 nestedRepeats,253 nestedRepeats,278 nestedRepeats,284 nestedRepeats,297 nestedRepeats,313 nestedRepeats,397 nestedRepeats,403 netCalJac3,19 netCalJac3,38 netCalJac3,60 netCalJac3,73 netCalJac3,121 netCalJac3,134 netCalJac3,151 netCalJac3,158 netCalJac3,205 netCalJac3,209 netCalJac3,235 netCalJac3,245 netCalJac3,250 netCalJac3,258 netCalJac3,266 netCalJac3,270 netCalJac3,280 netCalJac3,298 netCalJac3,307 netCalJac3,322 netCalJac3,337 netCalJac3,343 netCalJac3,346 netCalJac3,361 netCalJac3,367 netCalJac3,371 netCalJac3,391 netCalJac3,397 netCalJac3,411 netCalJac3,429 netCalJac3,446 netCalJac3,449 netCalJac3,454 netCalJac3,467 netCalJac3,480 netCalJac3,482 netCalJac3,489 netCalJac3,492 netCalJac3,499 netCalJac3,505 netCalJac3,518 netCalJac3,529 netCalJac3,533 netCalJac3,536 netCalJac3,544 netCalJac3,548 netCalJac3,554 netCalJac3,565 netCalJac3,568 netCalJac3,580 netCalJac3,588 netCalJac3,590 netCalJac3,598 netCalJac3,604 netCalJac3,613 netCalJac3,616 netCalJac3,647 netCalJac3,652 netCalJac3,661 netCalJac3,665 netCalJac3,672 netCalJac3,695 netCalJac3,703 netCalJac3,773 netCalJac3,777 netCalJac3,785 netCalJac3,789 netCalJac3,793 netCalJac3,801 netCalJac3,846 netCalJac3,856 netCalJac3,875 netCalJac3,878 netCalJac3,890 netCalJac3,914 netCalJac3,956 netCalJac3,962 netCalJac3,980 netCalJac3,987 netCalJac3,999 netCalJac3,1008 netCalJac3,1029 netCalJac3,1069 netGorGor3,18 netGorGor3,37 netGorGor3,59 netGorGor3,71 netGorGor3,119 netGorGor3,132 netGorGor3,149 netGorGor3,156 netGorGor3,203 netGorGor3,207 netGorGor3,233 netGorGor3,243 netGorGor3,248 netGorGor3,256 netGorGor3,264 netGorGor3,268 netGorGor3,278 netGorGor3,296 netGorGor3,305 netGorGor3,319 netGorGor3,334 netGorGor3,340 netGorGor3,343 netGorGor3,358 netGorGor3,364 netGorGor3,368 netGorGor3,388 netGorGor3,394 netGorGor3,408 netGorGor3,426 netGorGor3,443 netGorGor3,446 netGorGor3,451 netGorGor3,464 netGorGor3,477 netGorGor3,479 netGorGor3,486 netGorGor3,489 netGorGor3,496 netGorGor3,502 netGorGor3,515 netGorGor3,526 netGorGor3,530 netGorGor3,533 netGorGor3,541 netGorGor3,545 netGorGor3,551 netGorGor3,562 netGorGor3,565 netGorGor3,577 netGorGor3,585 netGorGor3,587 netGorGor3,595 netGorGor3,601 netGorGor3,610 netGorGor3,613 netGorGor3,644 netGorGor3,649 netGorGor3,658 netGorGor3,662 netGorGor3,669 netGorGor3,692 netGorGor3,700 netGorGor3,770 netGorGor3,774 netGorGor3,782 netGorGor3,786 netGorGor3,790 netGorGor3,798 netGorGor3,843 netGorGor3,853 netGorGor3,872 netGorGor3,875 netGorGor3,887 netGorGor3,911 netGorGor3,953 netGorGor3,959 netGorGor3,977 netGorGor3,984 netGorGor3,996 netGorGor3,1005 netGorGor3,1026 netGorGor3,1066 netMm10,18 netMm10,37 netMm10,59 netMm10,71 netMm10,119 netMm10,132 netMm10,149 netMm10,156 netMm10,203 netMm10,207 netMm10,233 netMm10,243 netMm10,248 netMm10,256 netMm10,264 netMm10,268 netMm10,278 netMm10,296 netMm10,305 netMm10,319 netMm10,334 netMm10,340 netMm10,343 netMm10,358 netMm10,364 netMm10,368 netMm10,388 netMm10,394 netMm10,408 netMm10,426 netMm10,443 netMm10,446 netMm10,451 netMm10,464 netMm10,477 netMm10,479 netMm10,486 netMm10,489 netMm10,496 netMm10,502 netMm10,515 netMm10,526 netMm10,530 netMm10,533 netMm10,541 netMm10,545 netMm10,551 netMm10,562 netMm10,565 netMm10,577 netMm10,585 netMm10,587 netMm10,595 netMm10,601 netMm10,610 netMm10,613 netMm10,644 netMm10,649 netMm10,658 netMm10,662 netMm10,669 netMm10,692 netMm10,700 netMm10,770 netMm10,774 netMm10,782 netMm10,786 netMm10,790 netMm10,798 netMm10,843 netMm10,853 netMm10,872 netMm10,875 netMm10,887 netMm10,911 netMm10,953 netMm10,959 netMm10,977 netMm10,984 netMm10,996 netMm10,1005 netMm10,1026 netMm10,1066 netTarSyr2,18 netTarSyr2,37 netTarSyr2,59 netTarSyr2,71 netTarSyr2,119 netTarSyr2,132 netTarSyr2,149 netTarSyr2,156 netTarSyr2,203 netTarSyr2,207 netTarSyr2,233 netTarSyr2,243 netTarSyr2,248 netTarSyr2,256 netTarSyr2,264 netTarSyr2,268 netTarSyr2,278 netTarSyr2,296 netTarSyr2,305 netTarSyr2,319 netTarSyr2,334 netTarSyr2,340 netTarSyr2,343 netTarSyr2,358 netTarSyr2,364 netTarSyr2,368 netTarSyr2,388 netTarSyr2,394 netTarSyr2,408 netTarSyr2,426 netTarSyr2,443 netTarSyr2,446 netTarSyr2,451 netTarSyr2,464 netTarSyr2,477 netTarSyr2,479 netTarSyr2,486 netTarSyr2,489 netTarSyr2,496 netTarSyr2,502 netTarSyr2,515 netTarSyr2,526 netTarSyr2,530 netTarSyr2,533 netTarSyr2,541 netTarSyr2,545 netTarSyr2,551 netTarSyr2,562 netTarSyr2,565 netTarSyr2,577 netTarSyr2,585 netTarSyr2,587 netTarSyr2,595 netTarSyr2,601 netTarSyr2,610 netTarSyr2,613 netTarSyr2,644 netTarSyr2,649 netTarSyr2,658 netTarSyr2,662 netTarSyr2,669 netTarSyr2,692 netTarSyr2,700 netTarSyr2,770 netTarSyr2,774 netTarSyr2,782 netTarSyr2,786 netTarSyr2,790 netTarSyr2,798 netTarSyr2,843 netTarSyr2,853 netTarSyr2,872 netTarSyr2,875 netTarSyr2,887 netTarSyr2,911 netTarSyr2,953 netTarSyr2,959 netTarSyr2,977 netTarSyr2,984 netTarSyr2,996 netTarSyr2,1005 netTarSyr2,1026 netTarSyr2,1066 quality,12 quality,17 quality,25 quality,27 quality,33 quality,36 quality,39 quality,48 quality,51 quality,69 quality,73 quality,82 quality,86 quality,94 quality,98 rmsk,33 rmsk,40 rmsk,46 rmsk,60 rmsk,66 rmsk,75 rmsk,80 rmsk,87 rmsk,101 rmsk,118 rmsk,204 rmsk,210 rmsk,214 rmsk,229 rmsk,231 rmsk,236 rmsk,238 rmsk,244 rmsk,247 rmsk,260 rmsk,265 rmsk,271 rmsk,274 rmsk,281 rmsk,291 rmsk,320 rmsk,336 rmsk,420 rmsk,426 simpleRepeat,60 windowmaskerSdust,22 windowmaskerSdust,28 windowmaskerSdust,32 windowmaskerSdust,36 windowmaskerSdust,42 windowmaskerSdust,55 windowmaskerSdust,74 windowmaskerSdust,81 xenoRefGene,28 xenoRefGene,35 xenoRefGene,50 xenoRefGene,57 xenoRefGene,61 xenoRefGene,65 xenoRefGene,76 xenoRefGene,91 xenoRefGene,94 xenoRefGene,97 xenoRefGene,111 xenoRefGene,117 xenoRefGene,122 xenoRefGene,127 xenoRefGene,135 xenoRefGene,163 xenoRefGene,168 xenoRefGene,183 xenoRefGene,198 xenoRefGene,211 xenoRefGene,218 xenoRefGene,223 xenoRefGene,247 xenoRefGene,250 xenoRefGene,266 xenoRefGene,275 xenoRefGene,298 their nestedRepeats,190 them chainCalJac3,808 chainGorGor3,805 chainMm10,805 chainNetCalJac3,811 chainNetGorGor3,808 chainNetMm10,808 chainNetTarSyr2,808 chainTarSyr2,805 cpgIslandExt,126 cpgIslandExtUnmasked,129 cpgIslandSuper,126 netCalJac3,808 netGorGor3,805 netMm10,805 netTarSyr2,805 rmsk,318 then chainCalJac3,658 chainCalJac3,797 chainCalJac3,882 chainGorGor3,655 chainGorGor3,794 chainGorGor3,879 chainMm10,655 chainMm10,794 chainMm10,879 chainNetCalJac3,661 chainNetCalJac3,800 chainNetCalJac3,885 chainNetGorGor3,658 chainNetGorGor3,797 chainNetGorGor3,882 chainNetMm10,658 chainNetMm10,797 chainNetMm10,882 chainNetTarSyr2,658 chainNetTarSyr2,797 chainNetTarSyr2,882 chainTarSyr2,655 chainTarSyr2,794 chainTarSyr2,879 cpgIslandExt,256 cpgIslandExtUnmasked,259 cpgIslandSuper,256 nestedRepeats,232 netCalJac3,658 netCalJac3,797 netCalJac3,882 netGorGor3,655 netGorGor3,794 netGorGor3,879 netMm10,655 netMm10,794 netMm10,879 netTarSyr2,655 netTarSyr2,794 netTarSyr2,879 there cpgIslandExt,120 cpgIslandExtUnmasked,123 cpgIslandSuper,120 therefore gold,123 these augustusGene,95 augustusGene,190 chainCalJac3,53 chainCalJac3,104 chainCalJac3,416 chainCalJac3,670 chainGorGor3,52 chainGorGor3,102 chainGorGor3,413 chainGorGor3,667 chainMm10,52 chainMm10,102 chainMm10,413 chainMm10,667 chainNetCalJac3,56 chainNetCalJac3,107 chainNetCalJac3,419 chainNetCalJac3,673 chainNetGorGor3,55 chainNetGorGor3,105 chainNetGorGor3,416 chainNetGorGor3,670 chainNetMm10,55 chainNetMm10,105 chainNetMm10,416 chainNetMm10,670 chainNetTarSyr2,55 chainNetTarSyr2,105 chainNetTarSyr2,416 chainNetTarSyr2,670 chainTarSyr2,52 chainTarSyr2,102 chainTarSyr2,413 chainTarSyr2,667 ensGene,10 ensGene,154 ensemblGeneScaffold,56 microsat,24 nestedRepeats,262 nestedRepeats,266 netCalJac3,53 netCalJac3,104 netCalJac3,416 netCalJac3,670 netGorGor3,52 netGorGor3,102 netGorGor3,413 netGorGor3,667 netMm10,52 netMm10,102 netMm10,413 netMm10,667 netTarSyr2,52 netTarSyr2,102 netTarSyr2,413 netTarSyr2,667 rmsk,235 simpleRepeat,33 thesis chainCalJac3,1028 chainGorGor3,1025 chainMm10,1025 chainNetCalJac3,1031 chainNetGorGor3,1028 chainNetMm10,1028 chainNetTarSyr2,1028 chainTarSyr2,1025 netCalJac3,1028 netGorGor3,1025 netMm10,1025 netTarSyr2,1025 they chainCalJac3,333 chainGorGor3,330 chainMm10,330 chainNetCalJac3,336 chainNetGorGor3,333 chainNetMm10,333 chainNetTarSyr2,333 chainTarSyr2,330 netCalJac3,333 netGorGor3,330 netMm10,330 netTarSyr2,330 thibaud-nissen xenoRefGene,326 thick chainCalJac3,44 chainGorGor3,43 chainMm10,43 chainNetCalJac3,47 chainNetGorGor3,46 chainNetMm10,46 chainNetTarSyr2,46 chainTarSyr2,43 netCalJac3,44 netGorGor3,43 netMm10,43 netTarSyr2,43 this augustusGene,13 augustusGene,106 augustusGene,224 chainCalJac3,14 chainCalJac3,175 chainCalJac3,303 chainCalJac3,403 chainCalJac3,701 chainCalJac3,823 chainGorGor3,13 chainGorGor3,173 chainGorGor3,301 chainGorGor3,400 chainGorGor3,698 chainGorGor3,820 chainMm10,13 chainMm10,173 chainMm10,301 chainMm10,400 chainMm10,698 chainMm10,820 chainNetCalJac3,17 chainNetCalJac3,178 chainNetCalJac3,306 chainNetCalJac3,406 chainNetCalJac3,704 chainNetCalJac3,826 chainNetGorGor3,16 chainNetGorGor3,176 chainNetGorGor3,304 chainNetGorGor3,403 chainNetGorGor3,701 chainNetGorGor3,823 chainNetMm10,16 chainNetMm10,176 chainNetMm10,304 chainNetMm10,403 chainNetMm10,701 chainNetMm10,823 chainNetTarSyr2,16 chainNetTarSyr2,176 chainNetTarSyr2,304 chainNetTarSyr2,403 chainNetTarSyr2,701 chainNetTarSyr2,823 chainTarSyr2,13 chainTarSyr2,173 chainTarSyr2,301 chainTarSyr2,400 chainTarSyr2,698 chainTarSyr2,820 cpgIslandExt,72 cpgIslandExt,222 cpgIslandExt,585 cpgIslandExtUnmasked,75 cpgIslandExtUnmasked,225 cpgIslandExtUnmasked,588 cpgIslandSuper,72 cpgIslandSuper,222 cpgIslandSuper,585 ensGene,119 ensGene,135 ensemblGeneScaffold,11 ensemblGeneScaffold,64 ensemblGeneScaffold,104 gap,8 gap,37 gap,45 gap,75 gap,116 gc5Base,38 gc5Base,77 genscan,11 genscan,65 genscan,128 gold,9 gold,39 gold,44 gold,70 gold,140 microsat,11 microsat,50 microsat,99 mrna,31 mrna,61 mrna,88 mrna,324 mrna,352 nestedRepeats,15 nestedRepeats,79 nestedRepeats,321 netCalJac3,14 netCalJac3,175 netCalJac3,303 netCalJac3,403 netCalJac3,701 netCalJac3,823 netGorGor3,13 netGorGor3,173 netGorGor3,301 netGorGor3,400 netGorGor3,698 netGorGor3,820 netMm10,13 netMm10,173 netMm10,301 netMm10,400 netMm10,698 netMm10,820 netTarSyr2,13 netTarSyr2,173 netTarSyr2,301 netTarSyr2,400 netTarSyr2,698 netTarSyr2,820 quality,54 rmsk,10 rmsk,51 rmsk,143 rmsk,344 simpleRepeat,12 simpleRepeat,31 windowmaskerSdust,13 windowmaskerSdust,49 windowmaskerSdust,87 xenoRefGene,12 xenoRefGene,38 xenoRefGene,47 xenoRefGene,85 xenoRefGene,140 xenoRefGene,179 xenoRefGene,215 xenoRefGene,281 those microsat,62 mrna,317 nestedRepeats,272 xenoRefGene,229 thousands chainCalJac3,256 chainGorGor3,254 chainMm10,254 chainNetCalJac3,259 chainNetGorGor3,257 chainNetMm10,257 chainNetTarSyr2,257 chainTarSyr2,254 netCalJac3,256 netGorGor3,254 netMm10,254 netTarSyr2,254 through gap,109 nestedRepeats,97 rmsk,309 xenoRefGene,90 time chainCalJac3,806 chainGorGor3,803 chainMm10,803 chainNetCalJac3,809 chainNetGorGor3,806 chainNetMm10,806 chainNetTarSyr2,806 chainTarSyr2,803 cpgIslandExt,99 cpgIslandExt,237 cpgIslandExtUnmasked,102 cpgIslandExtUnmasked,240 cpgIslandSuper,99 cpgIslandSuper,237 netCalJac3,806 netGorGor3,803 netMm10,803 netTarSyr2,803 tissue mrna,153 mrna,188 mrna,203 tissues mrna,196 to augustusGene,115 augustusGene,170 augustusGene,249 augustusGene,301 chainCalJac3,24 chainCalJac3,72 chainCalJac3,147 chainCalJac3,217 chainCalJac3,229 chainCalJac3,324 chainCalJac3,335 chainCalJac3,340 chainCalJac3,352 chainCalJac3,358 chainCalJac3,381 chainCalJac3,462 chainCalJac3,476 chainCalJac3,560 chainCalJac3,663 chainCalJac3,799 chainCalJac3,811 chainCalJac3,851 chainCalJac3,874 chainCalJac3,884 chainGorGor3,23 chainGorGor3,70 chainGorGor3,145 chainGorGor3,215 chainGorGor3,227 chainGorGor3,321 chainGorGor3,332 chainGorGor3,337 chainGorGor3,349 chainGorGor3,355 chainGorGor3,378 chainGorGor3,459 chainGorGor3,473 chainGorGor3,557 chainGorGor3,660 chainGorGor3,796 chainGorGor3,808 chainGorGor3,848 chainGorGor3,871 chainGorGor3,881 chainMm10,23 chainMm10,70 chainMm10,145 chainMm10,215 chainMm10,227 chainMm10,321 chainMm10,332 chainMm10,337 chainMm10,349 chainMm10,355 chainMm10,378 chainMm10,459 chainMm10,473 chainMm10,557 chainMm10,660 chainMm10,796 chainMm10,808 chainMm10,848 chainMm10,871 chainMm10,881 chainNetCalJac3,27 chainNetCalJac3,75 chainNetCalJac3,150 chainNetCalJac3,220 chainNetCalJac3,232 chainNetCalJac3,327 chainNetCalJac3,338 chainNetCalJac3,343 chainNetCalJac3,355 chainNetCalJac3,361 chainNetCalJac3,384 chainNetCalJac3,465 chainNetCalJac3,479 chainNetCalJac3,563 chainNetCalJac3,666 chainNetCalJac3,802 chainNetCalJac3,814 chainNetCalJac3,854 chainNetCalJac3,877 chainNetCalJac3,887 chainNetGorGor3,26 chainNetGorGor3,73 chainNetGorGor3,148 chainNetGorGor3,218 chainNetGorGor3,230 chainNetGorGor3,324 chainNetGorGor3,335 chainNetGorGor3,340 chainNetGorGor3,352 chainNetGorGor3,358 chainNetGorGor3,381 chainNetGorGor3,462 chainNetGorGor3,476 chainNetGorGor3,560 chainNetGorGor3,663 chainNetGorGor3,799 chainNetGorGor3,811 chainNetGorGor3,851 chainNetGorGor3,874 chainNetGorGor3,884 chainNetMm10,26 chainNetMm10,73 chainNetMm10,148 chainNetMm10,218 chainNetMm10,230 chainNetMm10,324 chainNetMm10,335 chainNetMm10,340 chainNetMm10,352 chainNetMm10,358 chainNetMm10,381 chainNetMm10,462 chainNetMm10,476 chainNetMm10,560 chainNetMm10,663 chainNetMm10,799 chainNetMm10,811 chainNetMm10,851 chainNetMm10,874 chainNetMm10,884 chainNetTarSyr2,26 chainNetTarSyr2,73 chainNetTarSyr2,148 chainNetTarSyr2,218 chainNetTarSyr2,230 chainNetTarSyr2,324 chainNetTarSyr2,335 chainNetTarSyr2,340 chainNetTarSyr2,352 chainNetTarSyr2,358 chainNetTarSyr2,381 chainNetTarSyr2,462 chainNetTarSyr2,476 chainNetTarSyr2,560 chainNetTarSyr2,663 chainNetTarSyr2,799 chainNetTarSyr2,811 chainNetTarSyr2,851 chainNetTarSyr2,874 chainNetTarSyr2,884 chainTarSyr2,23 chainTarSyr2,70 chainTarSyr2,145 chainTarSyr2,215 chainTarSyr2,227 chainTarSyr2,321 chainTarSyr2,332 chainTarSyr2,337 chainTarSyr2,349 chainTarSyr2,355 chainTarSyr2,378 chainTarSyr2,459 chainTarSyr2,473 chainTarSyr2,557 chainTarSyr2,660 chainTarSyr2,796 chainTarSyr2,808 chainTarSyr2,848 chainTarSyr2,871 chainTarSyr2,881 cpgIslandExt,69 cpgIslandExt,103 cpgIslandExt,124 cpgIslandExt,139 cpgIslandExt,205 cpgIslandExt,283 cpgIslandExt,358 cpgIslandExt,365 cpgIslandExt,371 cpgIslandExtUnmasked,72 cpgIslandExtUnmasked,106 cpgIslandExtUnmasked,127 cpgIslandExtUnmasked,142 cpgIslandExtUnmasked,208 cpgIslandExtUnmasked,286 cpgIslandExtUnmasked,361 cpgIslandExtUnmasked,368 cpgIslandExtUnmasked,374 cpgIslandSuper,69 cpgIslandSuper,103 cpgIslandSuper,124 cpgIslandSuper,139 cpgIslandSuper,205 cpgIslandSuper,283 cpgIslandSuper,358 cpgIslandSuper,365 cpgIslandSuper,371 ensGene,43 ensGene,149 ensemblGeneScaffold,50 ensemblGeneScaffold,88 ensemblGeneScaffold,100 gc5Base,48 genscan,95 genscan,105 genscan,114 genscan,145 genscan,171 gold,132 microsat,18 microsat,38 microsat,121 mrna,70 mrna,107 mrna,111 mrna,126 mrna,133 mrna,137 mrna,155 mrna,175 mrna,182 mrna,281 mrna,330 mrna,340 mrna,355 mrna,378 mrna,454 nestedRepeats,148 nestedRepeats,152 nestedRepeats,174 nestedRepeats,184 nestedRepeats,200 nestedRepeats,225 nestedRepeats,234 nestedRepeats,260 nestedRepeats,304 nestedRepeats,319 netCalJac3,24 netCalJac3,72 netCalJac3,147 netCalJac3,217 netCalJac3,229 netCalJac3,324 netCalJac3,335 netCalJac3,340 netCalJac3,352 netCalJac3,358 netCalJac3,381 netCalJac3,462 netCalJac3,476 netCalJac3,560 netCalJac3,663 netCalJac3,799 netCalJac3,811 netCalJac3,851 netCalJac3,874 netCalJac3,884 netGorGor3,23 netGorGor3,70 netGorGor3,145 netGorGor3,215 netGorGor3,227 netGorGor3,321 netGorGor3,332 netGorGor3,337 netGorGor3,349 netGorGor3,355 netGorGor3,378 netGorGor3,459 netGorGor3,473 netGorGor3,557 netGorGor3,660 netGorGor3,796 netGorGor3,808 netGorGor3,848 netGorGor3,871 netGorGor3,881 netMm10,23 netMm10,70 netMm10,145 netMm10,215 netMm10,227 netMm10,321 netMm10,332 netMm10,337 netMm10,349 netMm10,355 netMm10,378 netMm10,459 netMm10,473 netMm10,557 netMm10,660 netMm10,796 netMm10,808 netMm10,848 netMm10,871 netMm10,881 netTarSyr2,23 netTarSyr2,70 netTarSyr2,145 netTarSyr2,215 netTarSyr2,227 netTarSyr2,321 netTarSyr2,332 netTarSyr2,337 netTarSyr2,349 netTarSyr2,355 netTarSyr2,378 netTarSyr2,459 netTarSyr2,473 netTarSyr2,557 netTarSyr2,660 netTarSyr2,796 netTarSyr2,808 netTarSyr2,848 netTarSyr2,871 netTarSyr2,881 quality,44 quality,64 rmsk,147 rmsk,315 rmsk,327 rmsk,342 simpleRepeat,81 windowmaskerSdust,47 xenoRefGene,115 xenoRefGene,151 xenoRefGene,158 xenoRefGene,182 xenoRefGene,208 together chainCalJac3,127 chainGorGor3,125 chainMm10,125 chainNetCalJac3,130 chainNetGorGor3,128 chainNetMm10,128 chainNetTarSyr2,128 chainTarSyr2,125 netCalJac3,127 netGorGor3,125 netMm10,125 netTarSyr2,125 tolerate chainCalJac3,95 chainGorGor3,93 chainMm10,93 chainNetCalJac3,98 chainNetGorGor3,96 chainNetMm10,96 chainNetTarSyr2,96 chainTarSyr2,93 netCalJac3,95 netGorGor3,93 netMm10,93 netTarSyr2,93 tool mrna,524 windowmaskerSdust,24 xenoRefGene,308 toolkit windowmaskerSdust,31 windowmaskerSdust,38 tools nestedRepeats,314 rmsk,337 top chainCalJac3,517 chainGorGor3,514 chainMm10,514 chainNetCalJac3,520 chainNetGorGor3,517 chainNetMm10,517 chainNetTarSyr2,517 chainTarSyr2,514 cpgIslandExt,220 cpgIslandExtUnmasked,223 cpgIslandSuper,220 netCalJac3,517 netGorGor3,514 netMm10,514 netTarSyr2,514 xenoRefGene,95 top-level chainCalJac3,392 chainCalJac3,412 chainGorGor3,389 chainGorGor3,409 chainMm10,389 chainMm10,409 chainNetCalJac3,395 chainNetCalJac3,415 chainNetGorGor3,392 chainNetGorGor3,412 chainNetMm10,392 chainNetMm10,412 chainNetTarSyr2,392 chainNetTarSyr2,412 chainTarSyr2,389 chainTarSyr2,409 netCalJac3,392 netCalJac3,412 netGorGor3,389 netGorGor3,409 netMm10,389 netMm10,409 netTarSyr2,389 netTarSyr2,409 track augustusGene,14 augustusGene,107 chainCalJac3,15 chainCalJac3,59 chainCalJac3,62 chainCalJac3,123 chainCalJac3,265 chainCalJac3,268 chainCalJac3,319 chainCalJac3,354 chainCalJac3,386 chainCalJac3,573 chainCalJac3,702 chainCalJac3,765 chainGorGor3,14 chainGorGor3,58 chainGorGor3,61 chainGorGor3,121 chainGorGor3,263 chainGorGor3,266 chainGorGor3,316 chainGorGor3,351 chainGorGor3,383 chainGorGor3,570 chainGorGor3,699 chainGorGor3,762 chainMm10,14 chainMm10,58 chainMm10,61 chainMm10,121 chainMm10,263 chainMm10,266 chainMm10,316 chainMm10,351 chainMm10,383 chainMm10,570 chainMm10,699 chainMm10,762 chainNetCalJac3,18 chainNetCalJac3,62 chainNetCalJac3,65 chainNetCalJac3,126 chainNetCalJac3,268 chainNetCalJac3,271 chainNetCalJac3,322 chainNetCalJac3,357 chainNetCalJac3,389 chainNetCalJac3,576 chainNetCalJac3,705 chainNetCalJac3,768 chainNetGorGor3,17 chainNetGorGor3,61 chainNetGorGor3,64 chainNetGorGor3,124 chainNetGorGor3,266 chainNetGorGor3,269 chainNetGorGor3,319 chainNetGorGor3,354 chainNetGorGor3,386 chainNetGorGor3,573 chainNetGorGor3,702 chainNetGorGor3,765 chainNetMm10,17 chainNetMm10,61 chainNetMm10,64 chainNetMm10,124 chainNetMm10,266 chainNetMm10,269 chainNetMm10,319 chainNetMm10,354 chainNetMm10,386 chainNetMm10,573 chainNetMm10,702 chainNetMm10,765 chainNetTarSyr2,17 chainNetTarSyr2,61 chainNetTarSyr2,64 chainNetTarSyr2,124 chainNetTarSyr2,266 chainNetTarSyr2,269 chainNetTarSyr2,319 chainNetTarSyr2,354 chainNetTarSyr2,386 chainNetTarSyr2,573 chainNetTarSyr2,702 chainNetTarSyr2,765 chainTarSyr2,14 chainTarSyr2,58 chainTarSyr2,61 chainTarSyr2,121 chainTarSyr2,263 chainTarSyr2,266 chainTarSyr2,316 chainTarSyr2,351 chainTarSyr2,383 chainTarSyr2,570 chainTarSyr2,699 chainTarSyr2,762 cpgIslandExt,173 cpgIslandExt,202 cpgIslandExt,216 cpgIslandExt,314 cpgIslandExt,318 cpgIslandExt,402 cpgIslandExt,492 cpgIslandExt,586 cpgIslandExtUnmasked,176 cpgIslandExtUnmasked,205 cpgIslandExtUnmasked,219 cpgIslandExtUnmasked,317 cpgIslandExtUnmasked,321 cpgIslandExtUnmasked,405 cpgIslandExtUnmasked,495 cpgIslandExtUnmasked,589 cpgIslandSuper,173 cpgIslandSuper,202 cpgIslandSuper,216 cpgIslandSuper,314 cpgIslandSuper,318 cpgIslandSuper,402 cpgIslandSuper,492 cpgIslandSuper,586 ensGene,136 ensemblGeneScaffold,12 ensemblGeneScaffold,65 gap,9 gap,76 gc5Base,15 gc5Base,39 genscan,12 genscan,66 genscan,76 genscan,87 gold,10 gold,71 gold,141 microsat,12 microsat,51 microsat,59 microsat,87 mrna,15 mrna,32 mrna,62 mrna,87 mrna,99 mrna,325 mrna,444 nestedRepeats,16 nestedRepeats,78 nestedRepeats,80 nestedRepeats,322 netCalJac3,15 netCalJac3,59 netCalJac3,62 netCalJac3,123 netCalJac3,265 netCalJac3,268 netCalJac3,319 netCalJac3,354 netCalJac3,386 netCalJac3,573 netCalJac3,702 netCalJac3,765 netGorGor3,14 netGorGor3,58 netGorGor3,61 netGorGor3,121 netGorGor3,263 netGorGor3,266 netGorGor3,316 netGorGor3,351 netGorGor3,383 netGorGor3,570 netGorGor3,699 netGorGor3,762 netMm10,14 netMm10,58 netMm10,61 netMm10,121 netMm10,263 netMm10,266 netMm10,316 netMm10,351 netMm10,383 netMm10,570 netMm10,699 netMm10,762 netTarSyr2,14 netTarSyr2,58 netTarSyr2,61 netTarSyr2,121 netTarSyr2,263 netTarSyr2,266 netTarSyr2,316 netTarSyr2,351 netTarSyr2,383 netTarSyr2,570 netTarSyr2,699 netTarSyr2,762 quality,15 quality,34 quality,55 rmsk,11 rmsk,52 rmsk,144 rmsk,345 simpleRepeat,13 windowmaskerSdust,14 windowmaskerSdust,50 windowmaskerSdust,88 xenoRefGene,13 xenoRefGene,39 xenoRefGene,48 xenoRefGene,86 xenoRefGene,98 xenoRefGene,141 xenoRefGene,170 xenoRefGene,282 tracks augustusGene,41 chainCalJac3,779 chainGorGor3,776 chainMm10,776 chainNetCalJac3,782 chainNetGorGor3,779 chainNetMm10,779 chainNetTarSyr2,779 chainTarSyr2,776 ensGene,24 genscan,56 genscan,74 mrna,40 mrna,363 netCalJac3,779 netGorGor3,776 netMm10,776 netTarSyr2,776 xenoRefGene,56 traditional chainCalJac3,87 chainGorGor3,85 chainMm10,85 chainNetCalJac3,90 chainNetGorGor3,88 chainNetMm10,88 chainNetTarSyr2,88 chainTarSyr2,85 netCalJac3,87 netGorGor3,85 netMm10,85 netTarSyr2,85 trained augustusGene,150 training augustusGene,162 augustusGene,176 augustusGene,180 augustusGene,199 augustusGene,228 augustusGene,243 augustusGene,259 augustusGene,273 transcription cpgIslandExt,32 cpgIslandExtUnmasked,35 cpgIslandSuper,32 transcriptional genscan,28 transcripts augustusGene,124 xenoRefGene,379 translation augustusGene,57 translational genscan,29 transposable nestedRepeats,379 rmsk,402 transposons chainCalJac3,574 chainCalJac3,599 chainCalJac3,909 chainGorGor3,571 chainGorGor3,596 chainGorGor3,906 chainMm10,571 chainMm10,596 chainMm10,906 chainNetCalJac3,577 chainNetCalJac3,602 chainNetCalJac3,912 chainNetGorGor3,574 chainNetGorGor3,599 chainNetGorGor3,909 chainNetMm10,574 chainNetMm10,599 chainNetMm10,909 chainNetTarSyr2,574 chainNetTarSyr2,599 chainNetTarSyr2,909 chainTarSyr2,571 chainTarSyr2,596 chainTarSyr2,906 netCalJac3,574 netCalJac3,599 netCalJac3,909 netGorGor3,571 netGorGor3,596 netGorGor3,906 netMm10,571 netMm10,596 netMm10,906 netTarSyr2,571 netTarSyr2,596 netTarSyr2,906 trends nestedRepeats,353 rmsk,376 trf simpleRepeat,7 simpleRepeat,26 simpleRepeat,61 simpleRepeat,67 tri-nucleotide microsat,5 microsat,34 trimming chainCalJac3,807 chainGorGor3,804 chainMm10,804 chainNetCalJac3,810 chainNetGorGor3,807 chainNetMm10,807 chainNetTarSyr2,807 chainTarSyr2,804 netCalJac3,807 netGorGor3,804 netMm10,804 netTarSyr2,804 trna rmsk,190 true augustusGene,132 windowmaskerSdust,60 windowmaskerSdust,69 ts cpgIslandExt,106 cpgIslandExtUnmasked,109 cpgIslandSuper,106 turn chainCalJac3,341 chainGorGor3,338 chainMm10,338 chainNetCalJac3,344 chainNetGorGor3,341 chainNetMm10,341 chainNetTarSyr2,341 chainTarSyr2,338 cpgIslandExt,104 cpgIslandExtUnmasked,107 cpgIslandSuper,104 netCalJac3,341 netGorGor3,338 netMm10,338 netTarSyr2,338 xenoRefGene,133 twice cpgIslandExt,354 cpgIslandExtUnmasked,357 cpgIslandSuper,354 two chainCalJac3,915 chainGorGor3,912 chainMm10,912 chainNetCalJac3,918 chainNetGorGor3,915 chainNetMm10,915 chainNetTarSyr2,915 chainTarSyr2,912 netCalJac3,915 netGorGor3,912 netMm10,912 netTarSyr2,912 twobittofa cpgIslandExt,411 cpgIslandExt,497 cpgIslandExt,502 cpgIslandExtUnmasked,414 cpgIslandExtUnmasked,500 cpgIslandExtUnmasked,505 cpgIslandSuper,411 cpgIslandSuper,497 cpgIslandSuper,502 type gold,146 mrna,115 mrna,145 types augustusGene,89 chainCalJac3,513 chainGorGor3,510 chainMm10,510 chainNetCalJac3,516 chainNetGorGor3,513 chainNetMm10,513 chainNetTarSyr2,513 chainTarSyr2,510 gap,122 gold,137 mrna,194 mrna,366 netCalJac3,513 netGorGor3,510 netMm10,510 netTarSyr2,510 typical cpgIslandExt,161 cpgIslandExtUnmasked,164 cpgIslandSuper,161 typically cpgIslandExt,29 cpgIslandExtUnmasked,32 cpgIslandSuper,29 gc5Base,33 u chainCalJac3,1078 chainGorGor3,1075 chainMm10,1075 chainNetCalJac3,1081 chainNetGorGor3,1078 chainNetMm10,1078 chainNetTarSyr2,1078 chainTarSyr2,1075 netCalJac3,1078 netGorGor3,1075 netMm10,1075 netTarSyr2,1075 ucsc mrna,448 nestedRepeats,245 xenoRefGene,286 undergone xenoRefGene,69 underlies genscan,142 underlying ensemblGeneScaffold,23 ensemblGeneScaffold,52 xenoRefGene,37 underneath chainCalJac3,843 chainGorGor3,840 chainMm10,840 chainNetCalJac3,846 chainNetGorGor3,843 chainNetMm10,843 chainNetTarSyr2,843 chainTarSyr2,840 netCalJac3,843 netGorGor3,840 netMm10,840 netTarSyr2,840 ungapped chainCalJac3,452 chainGorGor3,449 chainMm10,449 chainNetCalJac3,455 chainNetGorGor3,452 chainNetMm10,452 chainNetTarSyr2,452 chainTarSyr2,449 netCalJac3,452 netGorGor3,449 netMm10,449 netTarSyr2,449 university chainCalJac3,929 chainCalJac3,963 chainCalJac3,1009 chainCalJac3,1032 chainGorGor3,926 chainGorGor3,960 chainGorGor3,1006 chainGorGor3,1029 chainMm10,926 chainMm10,960 chainMm10,1006 chainMm10,1029 chainNetCalJac3,932 chainNetCalJac3,966 chainNetCalJac3,1012 chainNetCalJac3,1035 chainNetGorGor3,929 chainNetGorGor3,963 chainNetGorGor3,1009 chainNetGorGor3,1032 chainNetMm10,929 chainNetMm10,963 chainNetMm10,1009 chainNetMm10,1032 chainNetTarSyr2,929 chainNetTarSyr2,963 chainNetTarSyr2,1009 chainNetTarSyr2,1032 chainTarSyr2,926 chainTarSyr2,960 chainTarSyr2,1006 chainTarSyr2,1029 netCalJac3,929 netCalJac3,963 netCalJac3,1009 netCalJac3,1032 netGorGor3,926 netGorGor3,960 netGorGor3,1006 netGorGor3,1029 netMm10,926 netMm10,960 netMm10,1006 netMm10,1029 netTarSyr2,926 netTarSyr2,960 netTarSyr2,1006 netTarSyr2,1029 unknown rmsk,203 unless cpgIslandExt,119 cpgIslandExtUnmasked,122 cpgIslandSuper,119 nestedRepeats,206 unmasked cpgIslandExt,169 cpgIslandExt,208 cpgIslandExt,315 cpgIslandExt,491 cpgIslandExtUnmasked,1 cpgIslandExtUnmasked,172 cpgIslandExtUnmasked,211 cpgIslandExtUnmasked,318 cpgIslandExtUnmasked,494 cpgIslandSuper,169 cpgIslandSuper,208 cpgIslandSuper,315 cpgIslandSuper,491 unprocessed chainCalJac3,232 chainGorGor3,230 chainMm10,230 chainNetCalJac3,235 chainNetGorGor3,233 chainNetMm10,233 chainNetTarSyr2,233 chainTarSyr2,230 netCalJac3,232 netGorGor3,230 netMm10,230 netTarSyr2,230 unpublished cpgIslandExt,602 cpgIslandExtUnmasked,605 cpgIslandSuper,602 unsequenced chainCalJac3,189 chainGorGor3,187 chainMm10,187 chainNetCalJac3,192 chainNetGorGor3,190 chainNetMm10,190 chainNetTarSyr2,190 chainTarSyr2,187 netCalJac3,189 netGorGor3,187 netMm10,187 netTarSyr2,187 unsure rmsk,263 up gold,77 rmsk,146 update mrna,503 nestedRepeats,46 nestedRepeats,58 nestedRepeats,336 nestedRepeats,343 rmsk,82 rmsk,94 rmsk,359 rmsk,366 xenoRefGene,344 updated xenoRefGene,41 use gold,88 mrna,112 used augustusGene,146 augustusGene,174 augustusGene,183 augustusGene,231 augustusGene,246 chainCalJac3,301 chainCalJac3,676 chainCalJac3,707 chainCalJac3,798 chainCalJac3,850 chainCalJac3,883 chainGorGor3,299 chainGorGor3,673 chainGorGor3,704 chainGorGor3,795 chainGorGor3,847 chainGorGor3,880 chainMm10,299 chainMm10,673 chainMm10,704 chainMm10,795 chainMm10,847 chainMm10,880 chainNetCalJac3,304 chainNetCalJac3,679 chainNetCalJac3,710 chainNetCalJac3,801 chainNetCalJac3,853 chainNetCalJac3,886 chainNetGorGor3,302 chainNetGorGor3,676 chainNetGorGor3,707 chainNetGorGor3,798 chainNetGorGor3,850 chainNetGorGor3,883 chainNetMm10,302 chainNetMm10,676 chainNetMm10,707 chainNetMm10,798 chainNetMm10,850 chainNetMm10,883 chainNetTarSyr2,302 chainNetTarSyr2,676 chainNetTarSyr2,707 chainNetTarSyr2,798 chainNetTarSyr2,850 chainNetTarSyr2,883 chainTarSyr2,299 chainTarSyr2,673 chainTarSyr2,704 chainTarSyr2,795 chainTarSyr2,847 chainTarSyr2,880 cpgIslandExt,308 cpgIslandExtUnmasked,311 cpgIslandSuper,308 ensGene,36 ensemblGeneScaffold,82 genscan,159 gold,14 mrna,69 mrna,221 mrna,280 nestedRepeats,247 nestedRepeats,292 nestedRepeats,318 netCalJac3,301 netCalJac3,676 netCalJac3,707 netCalJac3,798 netCalJac3,850 netCalJac3,883 netGorGor3,299 netGorGor3,673 netGorGor3,704 netGorGor3,795 netGorGor3,847 netGorGor3,880 netMm10,299 netMm10,673 netMm10,704 netMm10,795 netMm10,847 netMm10,880 netTarSyr2,299 netTarSyr2,673 netTarSyr2,704 netTarSyr2,795 netTarSyr2,847 netTarSyr2,880 rmsk,299 rmsk,341 useful chainCalJac3,286 chainCalJac3,486 chainGorGor3,284 chainGorGor3,483 chainMm10,284 chainMm10,483 chainNetCalJac3,289 chainNetCalJac3,489 chainNetGorGor3,287 chainNetGorGor3,486 chainNetMm10,287 chainNetMm10,486 chainNetTarSyr2,287 chainNetTarSyr2,486 chainTarSyr2,284 chainTarSyr2,483 microsat,20 netCalJac3,286 netCalJac3,486 netGorGor3,284 netGorGor3,483 netMm10,284 netMm10,483 netTarSyr2,284 netTarSyr2,483 user mrna,339 users xenoRefGene,150 uses rmsk,79 using augustusGene,294 chainCalJac3,77 chainCalJac3,612 chainCalJac3,772 chainGorGor3,75 chainGorGor3,609 chainGorGor3,769 chainMm10,75 chainMm10,609 chainMm10,769 chainNetCalJac3,80 chainNetCalJac3,615 chainNetCalJac3,775 chainNetGorGor3,78 chainNetGorGor3,612 chainNetGorGor3,772 chainNetMm10,78 chainNetMm10,612 chainNetMm10,772 chainNetTarSyr2,78 chainNetTarSyr2,612 chainNetTarSyr2,772 chainTarSyr2,75 chainTarSyr2,609 chainTarSyr2,769 cpgIslandExt,516 cpgIslandExt,589 cpgIslandExtUnmasked,519 cpgIslandExtUnmasked,592 cpgIslandSuper,516 cpgIslandSuper,589 ensGene,64 microsat,90 mrna,396 nestedRepeats,43 nestedRepeats,104 nestedRepeats,283 netCalJac3,77 netCalJac3,612 netCalJac3,772 netGorGor3,75 netGorGor3,609 netGorGor3,769 netMm10,75 netMm10,609 netMm10,769 netTarSyr2,75 netTarSyr2,609 netTarSyr2,769 rmsk,15 rmsk,290 xenoRefGene,227 ustat windowmaskerSdust,66 usually nestedRepeats,192 utils cpgIslandExt,565 cpgIslandExtUnmasked,568 cpgIslandSuper,565 v ensGene,185 ensemblGeneScaffold,124 v3.1 augustusGene,7 valid mrna,160 validate xenoRefGene,153 validation genscan,107 value mrna,231 variation microsat,7 nestedRepeats,11 rmsk,6 simpleRepeat,8 windowmaskerSdust,9 variety gc5Base,45 quality,61 vb chainCalJac3,1036 chainGorGor3,1033 chainMm10,1033 chainNetCalJac3,1039 chainNetGorGor3,1036 chainNetMm10,1036 chainNetTarSyr2,1036 chainTarSyr2,1033 netCalJac3,1036 netGorGor3,1033 netMm10,1033 netTarSyr2,1033 version augustusGene,23 augustusGene,263 cpgIslandExt,170 cpgIslandExt,193 cpgIslandExt,199 cpgIslandExt,209 cpgIslandExtUnmasked,173 cpgIslandExtUnmasked,196 cpgIslandExtUnmasked,202 cpgIslandExtUnmasked,212 cpgIslandSuper,170 cpgIslandSuper,193 cpgIslandSuper,199 cpgIslandSuper,209 rmsk,58 versions augustusGene,279 ensGene,133 nestedRepeats,251 nestedRepeats,267 vertebrate cpgIslandExt,59 cpgIslandExt,611 cpgIslandExtUnmasked,62 cpgIslandExtUnmasked,614 cpgIslandSuper,59 cpgIslandSuper,611 vertebrates augustusGene,209 cpgIslandExt,25 cpgIslandExtUnmasked,28 cpgIslandSuper,25 view chainCalJac3,463 chainGorGor3,460 chainMm10,460 chainNetCalJac3,466 chainNetGorGor3,463 chainNetMm10,463 chainNetTarSyr2,463 chainTarSyr2,460 cpgIslandExt,206 cpgIslandExtUnmasked,209 cpgIslandSuper,206 mrna,156 netCalJac3,463 netGorGor3,460 netMm10,460 netTarSyr2,460 viewed gold,80 visibility cpgIslandExt,212 cpgIslandExtUnmasked,215 cpgIslandSuper,212 visible cpgIslandExt,188 cpgIslandExtUnmasked,191 cpgIslandSuper,188 w chainCalJac3,1038 chainCalJac3,1058 chainCalJac3,1106 chainGorGor3,1035 chainGorGor3,1055 chainGorGor3,1103 chainMm10,1035 chainMm10,1055 chainMm10,1103 chainNetCalJac3,1041 chainNetCalJac3,1061 chainNetCalJac3,1109 chainNetGorGor3,1038 chainNetGorGor3,1058 chainNetGorGor3,1106 chainNetMm10,1038 chainNetMm10,1058 chainNetMm10,1106 chainNetTarSyr2,1038 chainNetTarSyr2,1058 chainNetTarSyr2,1106 chainTarSyr2,1035 chainTarSyr2,1055 chainTarSyr2,1103 gold,149 netCalJac3,1038 netCalJac3,1058 netCalJac3,1106 netGorGor3,1035 netGorGor3,1055 netGorGor3,1103 netMm10,1035 netMm10,1055 netMm10,1103 netTarSyr2,1035 netTarSyr2,1055 netTarSyr2,1103 waack augustusGene,318 was augustusGene,230 augustusGene,245 augustusGene,264 augustusGene,280 chainCalJac3,657 chainCalJac3,675 chainCalJac3,796 chainCalJac3,841 chainCalJac3,849 chainCalJac3,869 chainCalJac3,881 chainCalJac3,906 chainCalJac3,924 chainCalJac3,959 chainGorGor3,654 chainGorGor3,672 chainGorGor3,793 chainGorGor3,838 chainGorGor3,846 chainGorGor3,866 chainGorGor3,878 chainGorGor3,903 chainGorGor3,921 chainGorGor3,956 chainMm10,654 chainMm10,672 chainMm10,793 chainMm10,838 chainMm10,846 chainMm10,866 chainMm10,878 chainMm10,903 chainMm10,921 chainMm10,956 chainNetCalJac3,660 chainNetCalJac3,678 chainNetCalJac3,799 chainNetCalJac3,844 chainNetCalJac3,852 chainNetCalJac3,872 chainNetCalJac3,884 chainNetCalJac3,909 chainNetCalJac3,927 chainNetCalJac3,962 chainNetGorGor3,657 chainNetGorGor3,675 chainNetGorGor3,796 chainNetGorGor3,841 chainNetGorGor3,849 chainNetGorGor3,869 chainNetGorGor3,881 chainNetGorGor3,906 chainNetGorGor3,924 chainNetGorGor3,959 chainNetMm10,657 chainNetMm10,675 chainNetMm10,796 chainNetMm10,841 chainNetMm10,849 chainNetMm10,869 chainNetMm10,881 chainNetMm10,906 chainNetMm10,924 chainNetMm10,959 chainNetTarSyr2,657 chainNetTarSyr2,675 chainNetTarSyr2,796 chainNetTarSyr2,841 chainNetTarSyr2,849 chainNetTarSyr2,869 chainNetTarSyr2,881 chainNetTarSyr2,906 chainNetTarSyr2,924 chainNetTarSyr2,959 chainTarSyr2,654 chainTarSyr2,672 chainTarSyr2,793 chainTarSyr2,838 chainTarSyr2,846 chainTarSyr2,866 chainTarSyr2,878 chainTarSyr2,903 chainTarSyr2,921 chainTarSyr2,956 cpgIslandExt,255 cpgIslandExt,307 cpgIslandExt,587 cpgIslandExtUnmasked,258 cpgIslandExtUnmasked,310 cpgIslandExtUnmasked,590 cpgIslandSuper,255 cpgIslandSuper,307 cpgIslandSuper,587 microsat,108 mrna,415 mrna,445 netCalJac3,657 netCalJac3,675 netCalJac3,796 netCalJac3,841 netCalJac3,849 netCalJac3,869 netCalJac3,881 netCalJac3,906 netCalJac3,924 netCalJac3,959 netGorGor3,654 netGorGor3,672 netGorGor3,793 netGorGor3,838 netGorGor3,846 netGorGor3,866 netGorGor3,878 netGorGor3,903 netGorGor3,921 netGorGor3,956 netMm10,654 netMm10,672 netMm10,793 netMm10,838 netMm10,846 netMm10,866 netMm10,878 netMm10,903 netMm10,921 netMm10,956 netTarSyr2,654 netTarSyr2,672 netTarSyr2,793 netTarSyr2,838 netTarSyr2,846 netTarSyr2,866 netTarSyr2,878 netTarSyr2,903 netTarSyr2,921 netTarSyr2,956 rmsk,12 rmsk,262 simpleRepeat,68 windowmaskerSdust,52 windowmaskerSdust,78 xenoRefGene,254 xenoRefGene,283 ways gc5Base,47 quality,63 we ensGene,146 rmsk,122 webb chainCalJac3,938 chainCalJac3,975 chainGorGor3,935 chainGorGor3,972 chainMm10,935 chainMm10,972 chainNetCalJac3,941 chainNetCalJac3,978 chainNetGorGor3,938 chainNetGorGor3,975 chainNetMm10,938 chainNetMm10,975 chainNetTarSyr2,938 chainNetTarSyr2,975 chainTarSyr2,935 chainTarSyr2,972 netCalJac3,938 netCalJac3,975 netGorGor3,935 netGorGor3,972 netMm10,935 netMm10,972 netTarSyr2,935 netTarSyr2,972 weekly xenoRefGene,42 well augustusGene,78 cpgIslandExt,549 cpgIslandExtUnmasked,552 cpgIslandSuper,549 genscan,36 rmsk,54 were augustusGene,50 augustusGene,66 augustusGene,125 augustusGene,149 augustusGene,182 chainCalJac3,585 chainCalJac3,593 chainCalJac3,600 chainCalJac3,607 chainCalJac3,619 chainCalJac3,693 chainCalJac3,767 chainCalJac3,947 chainCalJac3,991 chainCalJac3,1005 chainGorGor3,582 chainGorGor3,590 chainGorGor3,597 chainGorGor3,604 chainGorGor3,616 chainGorGor3,690 chainGorGor3,764 chainGorGor3,944 chainGorGor3,988 chainGorGor3,1002 chainMm10,582 chainMm10,590 chainMm10,597 chainMm10,604 chainMm10,616 chainMm10,690 chainMm10,764 chainMm10,944 chainMm10,988 chainMm10,1002 chainNetCalJac3,588 chainNetCalJac3,596 chainNetCalJac3,603 chainNetCalJac3,610 chainNetCalJac3,622 chainNetCalJac3,696 chainNetCalJac3,770 chainNetCalJac3,950 chainNetCalJac3,994 chainNetCalJac3,1008 chainNetGorGor3,585 chainNetGorGor3,593 chainNetGorGor3,600 chainNetGorGor3,607 chainNetGorGor3,619 chainNetGorGor3,693 chainNetGorGor3,767 chainNetGorGor3,947 chainNetGorGor3,991 chainNetGorGor3,1005 chainNetMm10,585 chainNetMm10,593 chainNetMm10,600 chainNetMm10,607 chainNetMm10,619 chainNetMm10,693 chainNetMm10,767 chainNetMm10,947 chainNetMm10,991 chainNetMm10,1005 chainNetTarSyr2,585 chainNetTarSyr2,593 chainNetTarSyr2,600 chainNetTarSyr2,607 chainNetTarSyr2,619 chainNetTarSyr2,693 chainNetTarSyr2,767 chainNetTarSyr2,947 chainNetTarSyr2,991 chainNetTarSyr2,1005 chainTarSyr2,582 chainTarSyr2,590 chainTarSyr2,597 chainTarSyr2,604 chainTarSyr2,616 chainTarSyr2,690 chainTarSyr2,764 chainTarSyr2,944 chainTarSyr2,988 chainTarSyr2,1002 cpgIslandExt,227 cpgIslandExtUnmasked,230 cpgIslandSuper,227 ensGene,13 ensemblGeneScaffold,59 gc5Base,79 mrna,391 mrna,439 netCalJac3,585 netCalJac3,593 netCalJac3,600 netCalJac3,607 netCalJac3,619 netCalJac3,693 netCalJac3,767 netCalJac3,947 netCalJac3,991 netCalJac3,1005 netGorGor3,582 netGorGor3,590 netGorGor3,597 netGorGor3,604 netGorGor3,616 netGorGor3,690 netGorGor3,764 netGorGor3,944 netGorGor3,988 netGorGor3,1002 netMm10,582 netMm10,590 netMm10,597 netMm10,604 netMm10,616 netMm10,690 netMm10,764 netMm10,944 netMm10,988 netMm10,1002 netTarSyr2,582 netTarSyr2,590 netTarSyr2,597 netTarSyr2,604 netTarSyr2,616 netTarSyr2,690 netTarSyr2,764 netTarSyr2,944 netTarSyr2,988 netTarSyr2,1002 quality,89 quality,105 xenoRefGene,220 xenoRefGene,237 xenoRefGene,278 wheeler mrna,500 when augustusGene,188 augustusGene,238 chainCalJac3,414 chainGorGor3,411 chainMm10,411 chainNetCalJac3,417 chainNetGorGor3,414 chainNetMm10,414 chainNetTarSyr2,414 chainTarSyr2,411 mrna,92 mrna,102 mrna,400 netCalJac3,414 netGorGor3,411 netMm10,411 netTarSyr2,411 quality,41 xenoRefGene,239 where chainCalJac3,196 chainGorGor3,194 chainMm10,194 chainNetCalJac3,199 chainNetGorGor3,197 chainNetMm10,197 chainNetTarSyr2,197 chainTarSyr2,194 cpgIslandExt,151 cpgIslandExt,393 cpgIslandExtUnmasked,154 cpgIslandExtUnmasked,396 cpgIslandSuper,151 cpgIslandSuper,393 gold,95 netCalJac3,196 netGorGor3,194 netMm10,194 netTarSyr2,194 whether chainCalJac3,865 chainGorGor3,862 chainMm10,862 chainNetCalJac3,868 chainNetGorGor3,865 chainNetMm10,865 chainNetTarSyr2,865 chainTarSyr2,862 netCalJac3,865 netGorGor3,862 netMm10,862 netTarSyr2,862 which augustusGene,159 augustusGene,227 chainCalJac3,331 chainCalJac3,623 chainCalJac3,830 chainGorGor3,328 chainGorGor3,620 chainGorGor3,827 chainMm10,328 chainMm10,620 chainMm10,827 chainNetCalJac3,334 chainNetCalJac3,626 chainNetCalJac3,833 chainNetGorGor3,331 chainNetGorGor3,623 chainNetGorGor3,830 chainNetMm10,331 chainNetMm10,623 chainNetMm10,830 chainNetTarSyr2,331 chainNetTarSyr2,623 chainNetTarSyr2,830 chainTarSyr2,328 chainTarSyr2,620 chainTarSyr2,827 cpgIslandExt,85 cpgIslandExtUnmasked,88 cpgIslandSuper,85 mrna,179 nestedRepeats,31 nestedRepeats,87 netCalJac3,331 netCalJac3,623 netCalJac3,830 netGorGor3,328 netGorGor3,620 netGorGor3,827 netMm10,328 netMm10,620 netMm10,827 netTarSyr2,328 netTarSyr2,620 netTarSyr2,827 rmsk,21 rmsk,64 rmsk,158 rmsk,171 rmsk,197 simpleRepeat,27 while chainCalJac3,220 chainGorGor3,218 chainMm10,218 chainNetCalJac3,223 chainNetGorGor3,221 chainNetMm10,221 chainNetTarSyr2,221 chainTarSyr2,218 netCalJac3,220 netGorGor3,218 netMm10,218 netTarSyr2,218 white gap,105 whole chainCalJac3,471 chainGorGor3,468 chainMm10,468 chainNetCalJac3,474 chainNetGorGor3,471 chainNetMm10,471 chainNetTarSyr2,471 chainTarSyr2,468 cpgIslandExt,167 cpgIslandExtUnmasked,170 cpgIslandSuper,167 gap,128 gold,150 netCalJac3,471 netGorGor3,468 netMm10,468 netTarSyr2,468 width cpgIslandExt,430 cpgIslandExt,467 cpgIslandExt,470 cpgIslandExt,478 cpgIslandExtUnmasked,433 cpgIslandExtUnmasked,470 cpgIslandExtUnmasked,473 cpgIslandExtUnmasked,481 cpgIslandSuper,430 cpgIslandSuper,467 cpgIslandSuper,470 cpgIslandSuper,478 wildcards mrna,217 will mrna,250 mrna,268 mrna,297 mrna,314 rmsk,277 rmsk,283 window-based windowmaskerSdust,101 windowmasker windowmaskerSdust,7 windowmaskerSdust,21 windowmaskerSdust,23 windowmaskerSdust,51 windowmaskerSdust,58 windowmaskerSdust,65 windowmaskerSdust,100 windowmaskersdust windowmaskerSdust,83 windows gc5Base,7 gc5Base,28 wish mrna,181 xenoRefGene,207 with augustusGene,127 augustusGene,322 chainCalJac3,43 chainCalJac3,211 chainCalJac3,222 chainCalJac3,595 chainCalJac3,708 chainCalJac3,784 chainCalJac3,908 chainCalJac3,940 chainCalJac3,972 chainCalJac3,1109 chainGorGor3,42 chainGorGor3,209 chainGorGor3,220 chainGorGor3,592 chainGorGor3,705 chainGorGor3,781 chainGorGor3,905 chainGorGor3,937 chainGorGor3,969 chainGorGor3,1106 chainMm10,42 chainMm10,209 chainMm10,220 chainMm10,592 chainMm10,705 chainMm10,781 chainMm10,905 chainMm10,937 chainMm10,969 chainMm10,1106 chainNetCalJac3,46 chainNetCalJac3,214 chainNetCalJac3,225 chainNetCalJac3,598 chainNetCalJac3,711 chainNetCalJac3,787 chainNetCalJac3,911 chainNetCalJac3,943 chainNetCalJac3,975 chainNetCalJac3,1112 chainNetGorGor3,45 chainNetGorGor3,212 chainNetGorGor3,223 chainNetGorGor3,595 chainNetGorGor3,708 chainNetGorGor3,784 chainNetGorGor3,908 chainNetGorGor3,940 chainNetGorGor3,972 chainNetGorGor3,1109 chainNetMm10,45 chainNetMm10,212 chainNetMm10,223 chainNetMm10,595 chainNetMm10,708 chainNetMm10,784 chainNetMm10,908 chainNetMm10,940 chainNetMm10,972 chainNetMm10,1109 chainNetTarSyr2,45 chainNetTarSyr2,212 chainNetTarSyr2,223 chainNetTarSyr2,595 chainNetTarSyr2,708 chainNetTarSyr2,784 chainNetTarSyr2,908 chainNetTarSyr2,940 chainNetTarSyr2,972 chainNetTarSyr2,1109 chainTarSyr2,42 chainTarSyr2,209 chainTarSyr2,220 chainTarSyr2,592 chainTarSyr2,705 chainTarSyr2,781 chainTarSyr2,905 chainTarSyr2,937 chainTarSyr2,969 chainTarSyr2,1106 cpgIslandExt,19 cpgIslandExt,39 cpgIslandExt,141 cpgIslandExt,540 cpgIslandExtUnmasked,22 cpgIslandExtUnmasked,42 cpgIslandExtUnmasked,144 cpgIslandExtUnmasked,543 cpgIslandSuper,19 cpgIslandSuper,39 cpgIslandSuper,141 cpgIslandSuper,540 gap,53 gc5Base,35 gold,52 gold,142 microsat,69 microsat,76 mrna,435 nestedRepeats,133 netCalJac3,43 netCalJac3,211 netCalJac3,222 netCalJac3,595 netCalJac3,708 netCalJac3,784 netCalJac3,908 netCalJac3,940 netCalJac3,972 netCalJac3,1109 netGorGor3,42 netGorGor3,209 netGorGor3,220 netGorGor3,592 netGorGor3,705 netGorGor3,781 netGorGor3,905 netGorGor3,937 netGorGor3,969 netGorGor3,1106 netMm10,42 netMm10,209 netMm10,220 netMm10,592 netMm10,705 netMm10,781 netMm10,905 netMm10,937 netMm10,969 netMm10,1106 netTarSyr2,42 netTarSyr2,209 netTarSyr2,220 netTarSyr2,592 netTarSyr2,705 netTarSyr2,781 netTarSyr2,905 netTarSyr2,937 netTarSyr2,969 netTarSyr2,1106 rmsk,111 rmsk,225 simpleRepeat,52 windowmaskerSdust,54 xenoRefGene,230 xenoRefGene,274 within gold,117 mrna,85 mrna,424 simpleRepeat,37 xenoRefGene,84 xenoRefGene,263 wj chainCalJac3,1052 chainCalJac3,1094 chainGorGor3,1049 chainGorGor3,1091 chainMm10,1049 chainMm10,1091 chainNetCalJac3,1055 chainNetCalJac3,1097 chainNetGorGor3,1052 chainNetGorGor3,1094 chainNetMm10,1052 chainNetMm10,1094 chainNetTarSyr2,1052 chainNetTarSyr2,1094 chainTarSyr2,1049 chainTarSyr2,1091 mrna,519 netCalJac3,1052 netCalJac3,1094 netGorGor3,1049 netGorGor3,1091 netMm10,1049 netMm10,1091 netTarSyr2,1049 netTarSyr2,1091 xenoRefGene,304 wm windowmaskerSdust,1 wm_counts windowmaskerSdust,64 windowmaskerSdust,67 worldwide mrna,462 xenoRefGene,294 would cpgIslandExt,184 cpgIslandExtUnmasked,187 cpgIslandSuper,184 ensGene,147 written genscan,19 microsat,109 quality,106 simpleRepeat,69 wugsc chainCalJac3,6 chainCalJac3,69 chainCalJac3,310 chainNetCalJac3,7 chainNetCalJac3,72 chainNetCalJac3,313 chainNetCalJac3Viewchain,5 chainNetCalJac3Viewnet,5 netCalJac3,6 netCalJac3,69 netCalJac3,310 www.repeatmasker.org nestedRepeats,333 rmsk,356 y ensGene,177 ensemblGeneScaffold,116 yap chainCalJac3,1035 chainGorGor3,1032 chainMm10,1032 chainNetCalJac3,1038 chainNetGorGor3,1035 chainNetMm10,1035 chainNetTarSyr2,1035 chainTarSyr2,1032 netCalJac3,1035 netGorGor3,1032 netMm10,1032 netTarSyr2,1032 you mrna,180 rmsk,115 xenoRefGene,206 younger nestedRepeats,94 z chainCalJac3,1098 chainGorGor3,1095 chainMm10,1095 chainNetCalJac3,1101 chainNetGorGor3,1098 chainNetMm10,1098 chainNetTarSyr2,1098 chainTarSyr2,1095 netCalJac3,1098 netGorGor3,1095 netMm10,1095 netTarSyr2,1095 zebrafish augustusGene,202 augustusGene,278 zhang chainCalJac3,936 chainCalJac3,1097 chainGorGor3,933 chainGorGor3,1094 chainMm10,933 chainMm10,1094 chainNetCalJac3,939 chainNetCalJac3,1100 chainNetGorGor3,936 chainNetGorGor3,1097 chainNetMm10,936 chainNetMm10,1097 chainNetTarSyr2,936 chainNetTarSyr2,1097 chainTarSyr2,933 chainTarSyr2,1094 netCalJac3,936 netCalJac3,1097 netGorGor3,933 netGorGor3,1094 netMm10,933 netMm10,1094 netTarSyr2,933 netTarSyr2,1094 zheng chainCalJac3,935 chainGorGor3,932 chainMm10,932 chainNetCalJac3,938 chainNetGorGor3,935 chainNetMm10,935 chainNetTarSyr2,935 chainTarSyr2,932 netCalJac3,935 netGorGor3,932 netMm10,932 netTarSyr2,932 zoomed quality,42 zoomed-in genscan,103