track uniprot2024_02
shortLabel UniProt 2024_02
longLabel UniProt SwissProt/TrEMBL Protein Annotations, release 2024_02
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urls uniProtId="http://www.uniprot.org/uniprot/$$#section_features" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$"
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        track unipAliSwissprot2024_02
        shortLabel SwissProt Aln.
        longLabel UCSC alignment of SwissProt proteins to genome - 2024_02
        priority 1
        parent uniprot2024_02
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        type bigPsl
        bigDataUrl 2024_02/unipAliSwissprot.bb
        searchIndex name,acc
        urls acc="http://www.uniprot.org/uniprot/$$" hgncId="https://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=$$" 
        labelFields acc,uniprotName,geneName,hgncSym,refSeq,refSeqProt,ensProt,uniprotName
        mouseOverField protFullNames
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        color 2,12,120
        indelDoubleInsert on
        indelQueryInsert on
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        baseColorUseCds given
        baseColorDefault genomicCodons
        showDiffBasesAllScales on

        track unipAliTrembl2024_02
        shortLabel TrEMBL Aln.
        longLabel UCSC alignment of TrEMBL proteins to genome - 2024_02
        priority 2
        parent uniprot2024_02
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        type bigPsl
        bigDataUrl 2024_02/unipAliTrembl.bb
        searchIndex name,acc
        urls acc="http://www.uniprot.org/uniprot/$$" hgncId="https://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=$$" 
        labelFields acc,uniprotName,geneName,hgncSym,refSeq,refSeqProt,ensProt,uniprotName
        mouseOverField protFullNames
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        color 0,150,250
        indelDoubleInsert on
        indelQueryInsert on
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        baseColorUseCds given
        baseColorDefault genomicCodons
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        track unipLocSignal2024_02
        shortLabel Signal Peptide
        longLabel UniProt Signal Peptides - 2024_02
        priority 3
        parent uniprot2024_02
        visibility dense
        type bigBed 12 +
        bigDataUrl 2024_02/unipLocSignal.bb
        color 255,0,150
        itemRgb off
        filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL)

        track unipLocExtra2024_02
        shortLabel Extracellular
        longLabel UniProt Extracellular Domain - 2024_02
        priority 4
        parent uniprot2024_02
        visibility dense
        type bigBed 12 +
        bigDataUrl 2024_02/unipLocExtra.bb
        color 0,150,255
        itemRgb off
        filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL)

        track unipLocTransMemb2024_02
        shortLabel Transmembrane
        longLabel UniProt Transmembrane Domains - 2024_02
        priority 5
        parent uniprot2024_02
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        type bigBed 12 +
        bigDataUrl 2024_02/unipLocTransMemb.bb
        color 0,150,0
        itemRgb off
        filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL)

        track unipLocCytopl2024_02
        shortLabel Cytoplasmic
        longLabel UniProt Cytoplasmic Domains - 2024_02
        priority 6
        parent uniprot2024_02
        visibility dense
        type bigBed 12 +
        bigDataUrl 2024_02/unipLocCytopl.bb
        color 255,150,0
        itemRgb off
        filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL)

        track unipChain2024_02
        shortLabel Chains
        longLabel UniProt Mature Protein Products (Polypeptide Chains) - 2024_02
        priority 7
        parent uniprot2024_02
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        type bigBed 12 +
        bigDataUrl 2024_02/unipChain.bb
        urls uniProtId="http://www.uniprot.org/uniprot/$$#ptm_processing" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$"
        filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL)

        track unipInterest2024_02
        shortLabel Interest
        longLabel UniProt Regions of Interest - 2024_02
        priority 4
        parent uniprot2024_02
        visibility dense
        type bigBed 12 +
        bigDataUrl 2024_02/unipInterest.bb
        itemRgb off
        filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL)

        track unipDomain2024_02
        shortLabel Domains
        longLabel UniProt Domains - 2024_02
        priority 8
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        type bigBed 12 +
        bigDataUrl 2024_02/unipDomain.bb
        urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$"
        filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL)

        track unipDisulfBond2024_02
        shortLabel Disulf. Bonds
        longLabel UniProt Disulfide Bonds - 2024_02
        priority 8
        parent uniprot2024_02
        visibility dense
        type bigBed 12 +
        bigDataUrl 2024_02/unipDisulfBond.bb
        filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL)

        track unipModif2024_02
        shortLabel AA Modifications
        longLabel UniProt Amino Acid Modifications - 2024_02
        priority 9
        parent uniprot2024_02
        visibility dense
        type bigBed 12 +
        bigDataUrl 2024_02/unipModif.bb
        urls uniProtId="http://www.uniprot.org/uniprot/$$#aaMod_section" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$"
        filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL)

        track unipMut2024_02
        shortLabel Mutations
        longLabel UniProt Amino Acid Mutations - 2024_02
        priority 10
        parent uniprot2024_02
        visibility dense
        type bigBed 12 +
        bigDataUrl 2024_02/unipMut.bb
        urls uniProtId="http://www.uniprot.org/uniprot/$$#pathology_and_biotech" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" variationId="http://www.uniprot.org/uniprot/$$"

        track unipStruct2024_02
        shortLabel Structure
        longLabel UniProt Protein Primary/Secondary Structure Annotations - 2024_02
        priority 11
        parent uniprot2024_02
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        type bigBed 12 +
        bigDataUrl 2024_02/unipStruct.bb
        urls uniProtId="http://www.uniprot.org/uniprot/$$#structure" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$"
        filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL)

        track unipOther2024_02
        shortLabel Other Annot.
        longLabel UniProt Other Annotations - 2024_02
        priority 11
        parent uniprot2024_02
        visibility dense
        type bigBed 12 +
        bigDataUrl 2024_02/unipOther.bb
        urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$"
        filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL)

        track unipRepeat2024_02
        shortLabel Repeats
        longLabel UniProt Repeats - 2024_02
        priority 12
        parent uniprot2024_02
        visibility dense
        type bigBed 12 +
        bigDataUrl 2024_02/unipRepeat.bb
        urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$"
        filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL)

        track unipConflict2024_02
        shortLabel Seq. Conflicts
        longLabel UniProt Sequence Conflicts - 2024_02
        priority 13
        parent uniprot2024_02 off
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        type bigBed 12 +
        bigDataUrl 2024_02/unipConflict.bb
        urls uniProtId="http://www.uniprot.org/uniprot/$$#Sequence_conflict_section" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$"
        filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL)