hub uniprotwuhCor1ArchHub shortLabel Archived UniProt releases (wuhCor1) longLabel Archive of previous UniProt releases for wuhCor1 email genome@soe.ucsc.edu useOneFile on genome wuhCor1 track uniprot2023_05 shortLabel UniProt 2023_05 longLabel UniProt SwissProt/TrEMBL Protein Annotations, release 2023_05 visibility hide type bigBed 12 + exonNumbers off compositeTrack on allButtonPair on mouseOverField comments urls uniProtId="http://www.uniprot.org/uniprot/$$#section_features" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" itemRgb on hideEmptySubtracks on track unipAliSwissprot2023_05 shortLabel SwissProt Aln. longLabel UCSC alignment of SwissProt proteins to genome - 2023_05 priority 1 parent uniprot2023_05 visibility hide type bigPsl bigDataUrl 2023_05/unipAliSwissprot.bb searchIndex name,acc urls acc="http://www.uniprot.org/uniprot/$$" hgncId="https://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=$$" labelFields acc,uniprotName,geneName,hgncSym,refSeq,refSeqProt,ensProt,uniprotName mouseOverField protFullNames itemRgb off color 2,12,120 indelDoubleInsert on indelQueryInsert on baseColorTickColor contrastingColor baseColorUseCds given baseColorDefault genomicCodons showDiffBasesAllScales on track unipAliTrembl2023_05 shortLabel TrEMBL Aln. longLabel UCSC alignment of TrEMBL proteins to genome - 2023_05 priority 2 parent uniprot2023_05 visibility dense type bigPsl bigDataUrl 2023_05/unipAliTrembl.bb searchIndex name,acc urls acc="http://www.uniprot.org/uniprot/$$" hgncId="https://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=$$" labelFields acc,uniprotName,geneName,hgncSym,refSeq,refSeqProt,ensProt,uniprotName mouseOverField protFullNames itemRgb off color 0,150,250 indelDoubleInsert on indelQueryInsert on baseColorTickColor contrastingColor baseColorUseCds given baseColorDefault genomicCodons showDiffBasesAllScales on track unipLocSignal2023_05 shortLabel Signal Peptide longLabel UniProt Signal Peptides - 2023_05 priority 3 parent uniprot2023_05 visibility dense type bigBed 12 + bigDataUrl 2023_05/unipLocSignal.bb color 255,0,150 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocExtra2023_05 shortLabel Extracellular longLabel UniProt Extracellular Domain - 2023_05 priority 4 parent uniprot2023_05 visibility dense type bigBed 12 + bigDataUrl 2023_05/unipLocExtra.bb color 0,150,255 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocTransMemb2023_05 shortLabel Transmembrane longLabel UniProt Transmembrane Domains - 2023_05 priority 5 parent uniprot2023_05 visibility dense type bigBed 12 + bigDataUrl 2023_05/unipLocTransMemb.bb color 0,150,0 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocCytopl2023_05 shortLabel Cytoplasmic longLabel UniProt Cytoplasmic Domains - 2023_05 priority 6 parent uniprot2023_05 visibility dense type bigBed 12 + bigDataUrl 2023_05/unipLocCytopl.bb color 255,150,0 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipChain2023_05 shortLabel Chains longLabel UniProt Mature Protein Products (Polypeptide Chains) - 2023_05 priority 7 parent uniprot2023_05 visibility dense type bigBed 12 + bigDataUrl 2023_05/unipChain.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#ptm_processing" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipInterest2023_05 shortLabel Interest longLabel UniProt Regions of Interest - 2023_05 priority 4 parent uniprot2023_05 visibility dense type bigBed 12 + bigDataUrl 2023_05/unipInterest.bb itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipDomain2023_05 shortLabel Domains longLabel UniProt Domains - 2023_05 priority 8 parent uniprot2023_05 visibility dense type bigBed 12 + bigDataUrl 2023_05/unipDomain.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipDisulfBond2023_05 shortLabel Disulf. Bonds longLabel UniProt Disulfide Bonds - 2023_05 priority 8 parent uniprot2023_05 visibility dense type bigBed 12 + bigDataUrl 2023_05/unipDisulfBond.bb filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipModif2023_05 shortLabel AA Modifications longLabel UniProt Amino Acid Modifications - 2023_05 priority 9 parent uniprot2023_05 visibility dense type bigBed 12 + bigDataUrl 2023_05/unipModif.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#aaMod_section" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipMut2023_05 shortLabel Mutations longLabel UniProt Amino Acid Mutations - 2023_05 priority 10 parent uniprot2023_05 visibility dense type bigBed 12 + bigDataUrl 2023_05/unipMut.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#pathology_and_biotech" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" variationId="http://www.uniprot.org/uniprot/$$" track unipStruct2023_05 shortLabel Structure longLabel UniProt Protein Primary/Secondary Structure Annotations - 2023_05 priority 11 parent uniprot2023_05 visibility hide type bigBed 12 + bigDataUrl 2023_05/unipStruct.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#structure" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipOther2023_05 shortLabel Other Annot. longLabel UniProt Other Annotations - 2023_05 priority 11 parent uniprot2023_05 visibility dense type bigBed 12 + bigDataUrl 2023_05/unipOther.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipRepeat2023_05 shortLabel Repeats longLabel UniProt Repeats - 2023_05 priority 12 parent uniprot2023_05 visibility dense type bigBed 12 + bigDataUrl 2023_05/unipRepeat.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipConflict2023_05 shortLabel Seq. Conflicts longLabel UniProt Sequence Conflicts - 2023_05 priority 13 parent uniprot2023_05 off visibility dense type bigBed 12 + bigDataUrl 2023_05/unipConflict.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#Sequence_conflict_section" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track uniprot2022_05 shortLabel UniProt 2022_05 longLabel UniProt SwissProt/TrEMBL Protein Annotations, release 2022_05 visibility hide type bigBed 12 + exonNumbers off compositeTrack on allButtonPair on mouseOverField comments urls uniProtId="http://www.uniprot.org/uniprot/$$#section_features" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" itemRgb on hideEmptySubtracks on track unipAliSwissprot2022_05 shortLabel SwissProt Aln. longLabel UCSC alignment of SwissProt proteins to genome - 2022_05 priority 1 parent uniprot2022_05 visibility hide type bigPsl bigDataUrl 2022_05/unipAliSwissprot.bb searchIndex name,acc urls acc="http://www.uniprot.org/uniprot/$$" hgncId="https://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=$$" labelFields acc,uniprotName,geneName,hgncSym,refSeq,refSeqProt,ensProt,uniprotName mouseOverField protFullNames itemRgb off color 2,12,120 indelDoubleInsert on indelQueryInsert on baseColorTickColor contrastingColor baseColorUseCds given baseColorDefault genomicCodons showDiffBasesAllScales on track unipAliTrembl2022_05 shortLabel TrEMBL Aln. longLabel UCSC alignment of TrEMBL proteins to genome - 2022_05 priority 2 parent uniprot2022_05 visibility dense type bigPsl bigDataUrl 2022_05/unipAliTrembl.bb searchIndex name,acc urls acc="http://www.uniprot.org/uniprot/$$" hgncId="https://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=$$" labelFields acc,uniprotName,geneName,hgncSym,refSeq,refSeqProt,ensProt,uniprotName mouseOverField protFullNames itemRgb off color 0,150,250 indelDoubleInsert on indelQueryInsert on baseColorTickColor contrastingColor baseColorUseCds given baseColorDefault genomicCodons showDiffBasesAllScales on track unipLocSignal2022_05 shortLabel Signal Peptide longLabel UniProt Signal Peptides - 2022_05 priority 3 parent uniprot2022_05 visibility dense type bigBed 12 + bigDataUrl 2022_05/unipLocSignal.bb color 255,0,150 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocExtra2022_05 shortLabel Extracellular longLabel UniProt Extracellular Domain - 2022_05 priority 4 parent uniprot2022_05 visibility dense type bigBed 12 + bigDataUrl 2022_05/unipLocExtra.bb color 0,150,255 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocTransMemb2022_05 shortLabel Transmembrane longLabel UniProt Transmembrane Domains - 2022_05 priority 5 parent uniprot2022_05 visibility dense type bigBed 12 + bigDataUrl 2022_05/unipLocTransMemb.bb color 0,150,0 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocCytopl2022_05 shortLabel Cytoplasmic longLabel UniProt Cytoplasmic Domains - 2022_05 priority 6 parent uniprot2022_05 visibility dense type bigBed 12 + bigDataUrl 2022_05/unipLocCytopl.bb color 255,150,0 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipChain2022_05 shortLabel Chains longLabel UniProt Mature Protein Products (Polypeptide Chains) - 2022_05 priority 7 parent uniprot2022_05 visibility dense type bigBed 12 + bigDataUrl 2022_05/unipChain.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#ptm_processing" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipInterest2022_05 shortLabel Interest longLabel UniProt Regions of Interest - 2022_05 priority 4 parent uniprot2022_05 visibility dense type bigBed 12 + bigDataUrl 2022_05/unipInterest.bb itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipDomain2022_05 shortLabel Domains longLabel UniProt Domains - 2022_05 priority 8 parent uniprot2022_05 visibility dense type bigBed 12 + bigDataUrl 2022_05/unipDomain.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipDisulfBond2022_05 shortLabel Disulf. Bonds longLabel UniProt Disulfide Bonds - 2022_05 priority 8 parent uniprot2022_05 visibility dense type bigBed 12 + bigDataUrl 2022_05/unipDisulfBond.bb filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipModif2022_05 shortLabel AA Modifications longLabel UniProt Amino Acid Modifications - 2022_05 priority 9 parent uniprot2022_05 visibility dense type bigBed 12 + bigDataUrl 2022_05/unipModif.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#aaMod_section" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipMut2022_05 shortLabel Mutations longLabel UniProt Amino Acid Mutations - 2022_05 priority 10 parent uniprot2022_05 visibility dense type bigBed 12 + bigDataUrl 2022_05/unipMut.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#pathology_and_biotech" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" variationId="http://www.uniprot.org/uniprot/$$" track unipStruct2022_05 shortLabel Structure longLabel UniProt Protein Primary/Secondary Structure Annotations - 2022_05 priority 11 parent uniprot2022_05 visibility hide type bigBed 12 + bigDataUrl 2022_05/unipStruct.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#structure" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipOther2022_05 shortLabel Other Annot. longLabel UniProt Other Annotations - 2022_05 priority 11 parent uniprot2022_05 visibility dense type bigBed 12 + bigDataUrl 2022_05/unipOther.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipRepeat2022_05 shortLabel Repeats longLabel UniProt Repeats - 2022_05 priority 12 parent uniprot2022_05 visibility dense type bigBed 12 + bigDataUrl 2022_05/unipRepeat.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipConflict2022_05 shortLabel Seq. Conflicts longLabel UniProt Sequence Conflicts - 2022_05 priority 13 parent uniprot2022_05 off visibility dense type bigBed 12 + bigDataUrl 2022_05/unipConflict.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#Sequence_conflict_section" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track uniprot2024_01 shortLabel UniProt 2024_01 longLabel UniProt SwissProt/TrEMBL Protein Annotations, release 2024_01 visibility hide type bigBed 12 + exonNumbers off compositeTrack on allButtonPair on mouseOverField comments urls uniProtId="http://www.uniprot.org/uniprot/$$#section_features" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" itemRgb on hideEmptySubtracks on track unipAliSwissprot2024_01 shortLabel SwissProt Aln. longLabel UCSC alignment of SwissProt proteins to genome - 2024_01 priority 1 parent uniprot2024_01 visibility hide type bigPsl bigDataUrl 2024_01/unipAliSwissprot.bb searchIndex name,acc urls acc="http://www.uniprot.org/uniprot/$$" hgncId="https://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=$$" labelFields acc,uniprotName,geneName,hgncSym,refSeq,refSeqProt,ensProt,uniprotName mouseOverField protFullNames itemRgb off color 2,12,120 indelDoubleInsert on indelQueryInsert on baseColorTickColor contrastingColor baseColorUseCds given baseColorDefault genomicCodons showDiffBasesAllScales on track unipAliTrembl2024_01 shortLabel TrEMBL Aln. longLabel UCSC alignment of TrEMBL proteins to genome - 2024_01 priority 2 parent uniprot2024_01 visibility dense type bigPsl bigDataUrl 2024_01/unipAliTrembl.bb searchIndex name,acc urls acc="http://www.uniprot.org/uniprot/$$" hgncId="https://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=$$" labelFields acc,uniprotName,geneName,hgncSym,refSeq,refSeqProt,ensProt,uniprotName mouseOverField protFullNames itemRgb off color 0,150,250 indelDoubleInsert on indelQueryInsert on baseColorTickColor contrastingColor baseColorUseCds given baseColorDefault genomicCodons showDiffBasesAllScales on track unipLocSignal2024_01 shortLabel Signal Peptide longLabel UniProt Signal Peptides - 2024_01 priority 3 parent uniprot2024_01 visibility dense type bigBed 12 + bigDataUrl 2024_01/unipLocSignal.bb color 255,0,150 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocExtra2024_01 shortLabel Extracellular longLabel UniProt Extracellular Domain - 2024_01 priority 4 parent uniprot2024_01 visibility dense type bigBed 12 + bigDataUrl 2024_01/unipLocExtra.bb color 0,150,255 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocTransMemb2024_01 shortLabel Transmembrane longLabel UniProt Transmembrane Domains - 2024_01 priority 5 parent uniprot2024_01 visibility dense type bigBed 12 + bigDataUrl 2024_01/unipLocTransMemb.bb color 0,150,0 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocCytopl2024_01 shortLabel Cytoplasmic longLabel UniProt Cytoplasmic Domains - 2024_01 priority 6 parent uniprot2024_01 visibility dense type bigBed 12 + bigDataUrl 2024_01/unipLocCytopl.bb color 255,150,0 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipChain2024_01 shortLabel Chains longLabel UniProt Mature Protein Products (Polypeptide Chains) - 2024_01 priority 7 parent uniprot2024_01 visibility dense type bigBed 12 + bigDataUrl 2024_01/unipChain.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#ptm_processing" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipInterest2024_01 shortLabel Interest longLabel UniProt Regions of Interest - 2024_01 priority 4 parent uniprot2024_01 visibility dense type bigBed 12 + bigDataUrl 2024_01/unipInterest.bb itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipDomain2024_01 shortLabel Domains longLabel UniProt Domains - 2024_01 priority 8 parent uniprot2024_01 visibility dense type bigBed 12 + bigDataUrl 2024_01/unipDomain.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipDisulfBond2024_01 shortLabel Disulf. Bonds longLabel UniProt Disulfide Bonds - 2024_01 priority 8 parent uniprot2024_01 visibility dense type bigBed 12 + bigDataUrl 2024_01/unipDisulfBond.bb filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipModif2024_01 shortLabel AA Modifications longLabel UniProt Amino Acid Modifications - 2024_01 priority 9 parent uniprot2024_01 visibility dense type bigBed 12 + bigDataUrl 2024_01/unipModif.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#aaMod_section" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipMut2024_01 shortLabel Mutations longLabel UniProt Amino Acid Mutations - 2024_01 priority 10 parent uniprot2024_01 visibility dense type bigBed 12 + bigDataUrl 2024_01/unipMut.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#pathology_and_biotech" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" variationId="http://www.uniprot.org/uniprot/$$" track unipStruct2024_01 shortLabel Structure longLabel UniProt Protein Primary/Secondary Structure Annotations - 2024_01 priority 11 parent uniprot2024_01 visibility hide type bigBed 12 + bigDataUrl 2024_01/unipStruct.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#structure" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipOther2024_01 shortLabel Other Annot. longLabel UniProt Other Annotations - 2024_01 priority 11 parent uniprot2024_01 visibility dense type bigBed 12 + bigDataUrl 2024_01/unipOther.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipRepeat2024_01 shortLabel Repeats longLabel UniProt Repeats - 2024_01 priority 12 parent uniprot2024_01 visibility dense type bigBed 12 + bigDataUrl 2024_01/unipRepeat.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipConflict2024_01 shortLabel Seq. Conflicts longLabel UniProt Sequence Conflicts - 2024_01 priority 13 parent uniprot2024_01 off visibility dense type bigBed 12 + bigDataUrl 2024_01/unipConflict.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#Sequence_conflict_section" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track uniprot2023_02 shortLabel UniProt 2023_02 longLabel UniProt SwissProt/TrEMBL Protein Annotations, release 2023_02 visibility hide type bigBed 12 + exonNumbers off compositeTrack on allButtonPair on mouseOverField comments urls uniProtId="http://www.uniprot.org/uniprot/$$#section_features" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" itemRgb on hideEmptySubtracks on track unipAliSwissprot2023_02 shortLabel SwissProt Aln. longLabel UCSC alignment of SwissProt proteins to genome - 2023_02 priority 1 parent uniprot2023_02 visibility hide type bigPsl bigDataUrl 2023_02/unipAliSwissprot.bb searchIndex name,acc urls acc="http://www.uniprot.org/uniprot/$$" hgncId="https://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=$$" labelFields acc,uniprotName,geneName,hgncSym,refSeq,refSeqProt,ensProt,uniprotName mouseOverField protFullNames itemRgb off color 2,12,120 indelDoubleInsert on indelQueryInsert on baseColorTickColor contrastingColor baseColorUseCds given baseColorDefault genomicCodons showDiffBasesAllScales on track unipAliTrembl2023_02 shortLabel TrEMBL Aln. longLabel UCSC alignment of TrEMBL proteins to genome - 2023_02 priority 2 parent uniprot2023_02 visibility dense type bigPsl bigDataUrl 2023_02/unipAliTrembl.bb searchIndex name,acc urls acc="http://www.uniprot.org/uniprot/$$" hgncId="https://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=$$" labelFields acc,uniprotName,geneName,hgncSym,refSeq,refSeqProt,ensProt,uniprotName mouseOverField protFullNames itemRgb off color 0,150,250 indelDoubleInsert on indelQueryInsert on baseColorTickColor contrastingColor baseColorUseCds given baseColorDefault genomicCodons showDiffBasesAllScales on track unipLocSignal2023_02 shortLabel Signal Peptide longLabel UniProt Signal Peptides - 2023_02 priority 3 parent uniprot2023_02 visibility dense type bigBed 12 + bigDataUrl 2023_02/unipLocSignal.bb color 255,0,150 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocExtra2023_02 shortLabel Extracellular longLabel UniProt Extracellular Domain - 2023_02 priority 4 parent uniprot2023_02 visibility dense type bigBed 12 + bigDataUrl 2023_02/unipLocExtra.bb color 0,150,255 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocTransMemb2023_02 shortLabel Transmembrane longLabel UniProt Transmembrane Domains - 2023_02 priority 5 parent uniprot2023_02 visibility dense type bigBed 12 + bigDataUrl 2023_02/unipLocTransMemb.bb color 0,150,0 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocCytopl2023_02 shortLabel Cytoplasmic longLabel UniProt Cytoplasmic Domains - 2023_02 priority 6 parent uniprot2023_02 visibility dense type bigBed 12 + bigDataUrl 2023_02/unipLocCytopl.bb color 255,150,0 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipChain2023_02 shortLabel Chains longLabel UniProt Mature Protein Products (Polypeptide Chains) - 2023_02 priority 7 parent uniprot2023_02 visibility dense type bigBed 12 + bigDataUrl 2023_02/unipChain.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#ptm_processing" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipInterest2023_02 shortLabel Interest longLabel UniProt Regions of Interest - 2023_02 priority 4 parent uniprot2023_02 visibility dense type bigBed 12 + bigDataUrl 2023_02/unipInterest.bb itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipDomain2023_02 shortLabel Domains longLabel UniProt Domains - 2023_02 priority 8 parent uniprot2023_02 visibility dense type bigBed 12 + bigDataUrl 2023_02/unipDomain.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipDisulfBond2023_02 shortLabel Disulf. Bonds longLabel UniProt Disulfide Bonds - 2023_02 priority 8 parent uniprot2023_02 visibility dense type bigBed 12 + bigDataUrl 2023_02/unipDisulfBond.bb filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipModif2023_02 shortLabel AA Modifications longLabel UniProt Amino Acid Modifications - 2023_02 priority 9 parent uniprot2023_02 visibility dense type bigBed 12 + bigDataUrl 2023_02/unipModif.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#aaMod_section" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipMut2023_02 shortLabel Mutations longLabel UniProt Amino Acid Mutations - 2023_02 priority 10 parent uniprot2023_02 visibility dense type bigBed 12 + bigDataUrl 2023_02/unipMut.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#pathology_and_biotech" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" variationId="http://www.uniprot.org/uniprot/$$" track unipStruct2023_02 shortLabel Structure longLabel UniProt Protein Primary/Secondary Structure Annotations - 2023_02 priority 11 parent uniprot2023_02 visibility hide type bigBed 12 + bigDataUrl 2023_02/unipStruct.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#structure" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipOther2023_02 shortLabel Other Annot. longLabel UniProt Other Annotations - 2023_02 priority 11 parent uniprot2023_02 visibility dense type bigBed 12 + bigDataUrl 2023_02/unipOther.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipRepeat2023_02 shortLabel Repeats longLabel UniProt Repeats - 2023_02 priority 12 parent uniprot2023_02 visibility dense type bigBed 12 + bigDataUrl 2023_02/unipRepeat.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipConflict2023_02 shortLabel Seq. Conflicts longLabel UniProt Sequence Conflicts - 2023_02 priority 13 parent uniprot2023_02 off visibility dense type bigBed 12 + bigDataUrl 2023_02/unipConflict.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#Sequence_conflict_section" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track uniprot01-Mar-2023 shortLabel UniProt 01-Mar-2023 longLabel UniProt SwissProt/TrEMBL Protein Annotations, release 01-Mar-2023 visibility hide type bigBed 12 + exonNumbers off compositeTrack on allButtonPair on mouseOverField comments urls uniProtId="http://www.uniprot.org/uniprot/$$#section_features" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" itemRgb on hideEmptySubtracks on track unipAliSwissprot01-Mar-2023 shortLabel SwissProt Aln. longLabel UCSC alignment of SwissProt proteins to genome - 01-Mar-2023 priority 1 parent uniprot01-Mar-2023 visibility hide type bigPsl bigDataUrl 01-Mar-2023/unipAliSwissprot.bb searchIndex name,acc urls acc="http://www.uniprot.org/uniprot/$$" hgncId="https://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=$$" labelFields acc,uniprotName,geneName,hgncSym,refSeq,refSeqProt,ensProt,uniprotName mouseOverField protFullNames itemRgb off color 2,12,120 indelDoubleInsert on indelQueryInsert on baseColorTickColor contrastingColor baseColorUseCds given baseColorDefault genomicCodons showDiffBasesAllScales on track unipAliTrembl01-Mar-2023 shortLabel TrEMBL Aln. longLabel UCSC alignment of TrEMBL proteins to genome - 01-Mar-2023 priority 2 parent uniprot01-Mar-2023 visibility dense type bigPsl bigDataUrl 01-Mar-2023/unipAliTrembl.bb searchIndex name,acc urls acc="http://www.uniprot.org/uniprot/$$" hgncId="https://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=$$" labelFields acc,uniprotName,geneName,hgncSym,refSeq,refSeqProt,ensProt,uniprotName mouseOverField protFullNames itemRgb off color 0,150,250 indelDoubleInsert on indelQueryInsert on baseColorTickColor contrastingColor baseColorUseCds given baseColorDefault genomicCodons showDiffBasesAllScales on track unipLocSignal01-Mar-2023 shortLabel Signal Peptide longLabel UniProt Signal Peptides - 01-Mar-2023 priority 3 parent uniprot01-Mar-2023 visibility dense type bigBed 12 + bigDataUrl 01-Mar-2023/unipLocSignal.bb color 255,0,150 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocExtra01-Mar-2023 shortLabel Extracellular longLabel UniProt Extracellular Domain - 01-Mar-2023 priority 4 parent uniprot01-Mar-2023 visibility dense type bigBed 12 + bigDataUrl 01-Mar-2023/unipLocExtra.bb color 0,150,255 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocTransMemb01-Mar-2023 shortLabel Transmembrane longLabel UniProt Transmembrane Domains - 01-Mar-2023 priority 5 parent uniprot01-Mar-2023 visibility dense type bigBed 12 + bigDataUrl 01-Mar-2023/unipLocTransMemb.bb color 0,150,0 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocCytopl01-Mar-2023 shortLabel Cytoplasmic longLabel UniProt Cytoplasmic Domains - 01-Mar-2023 priority 6 parent uniprot01-Mar-2023 visibility dense type bigBed 12 + bigDataUrl 01-Mar-2023/unipLocCytopl.bb color 255,150,0 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipChain01-Mar-2023 shortLabel Chains longLabel UniProt Mature Protein Products (Polypeptide Chains) - 01-Mar-2023 priority 7 parent uniprot01-Mar-2023 visibility dense type bigBed 12 + bigDataUrl 01-Mar-2023/unipChain.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#ptm_processing" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipInterest01-Mar-2023 shortLabel Interest longLabel UniProt Regions of Interest - 01-Mar-2023 priority 4 parent uniprot01-Mar-2023 visibility dense type bigBed 12 + bigDataUrl 01-Mar-2023/unipInterest.bb itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipDomain01-Mar-2023 shortLabel Domains longLabel UniProt Domains - 01-Mar-2023 priority 8 parent uniprot01-Mar-2023 visibility dense type bigBed 12 + bigDataUrl 01-Mar-2023/unipDomain.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipDisulfBond01-Mar-2023 shortLabel Disulf. Bonds longLabel UniProt Disulfide Bonds - 01-Mar-2023 priority 8 parent uniprot01-Mar-2023 visibility dense type bigBed 12 + bigDataUrl 01-Mar-2023/unipDisulfBond.bb filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipModif01-Mar-2023 shortLabel AA Modifications longLabel UniProt Amino Acid Modifications - 01-Mar-2023 priority 9 parent uniprot01-Mar-2023 visibility dense type bigBed 12 + bigDataUrl 01-Mar-2023/unipModif.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#aaMod_section" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipMut01-Mar-2023 shortLabel Mutations longLabel UniProt Amino Acid Mutations - 01-Mar-2023 priority 10 parent uniprot01-Mar-2023 visibility dense type bigBed 12 + bigDataUrl 01-Mar-2023/unipMut.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#pathology_and_biotech" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" variationId="http://www.uniprot.org/uniprot/$$" track unipStruct01-Mar-2023 shortLabel Structure longLabel UniProt Protein Primary/Secondary Structure Annotations - 01-Mar-2023 priority 11 parent uniprot01-Mar-2023 visibility hide type bigBed 12 + bigDataUrl 01-Mar-2023/unipStruct.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#structure" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipOther01-Mar-2023 shortLabel Other Annot. longLabel UniProt Other Annotations - 01-Mar-2023 priority 11 parent uniprot01-Mar-2023 visibility dense type bigBed 12 + bigDataUrl 01-Mar-2023/unipOther.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipRepeat01-Mar-2023 shortLabel Repeats longLabel UniProt Repeats - 01-Mar-2023 priority 12 parent uniprot01-Mar-2023 visibility dense type bigBed 12 + bigDataUrl 01-Mar-2023/unipRepeat.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipConflict01-Mar-2023 shortLabel Seq. Conflicts longLabel UniProt Sequence Conflicts - 01-Mar-2023 priority 13 parent uniprot01-Mar-2023 off visibility dense type bigBed 12 + bigDataUrl 01-Mar-2023/unipConflict.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#Sequence_conflict_section" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) # this file is used for building the archive track hub, it is template, not the final file. # doUniprot builds the final file. # if you modify this file, make sure that you also modify the original of the native track in trackDb/uniprot.ra track uniprot26-May-2022 shortLabel UniProt 26-May-2022 longLabel UniProt SwissProt/TrEMBL Protein Annotations, release 26-May-2022 #group genes visibility hide type bigBed 12 + exonNumbers off compositeTrack on allButtonPair on mouseOverField comments urls uniProtId="http://www.uniprot.org/uniprot/$$#section_features" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" itemRgb on #dataVersion /gbdb/$D/uniprot/version.txt hideEmptySubtracks on track unipAliSwissprot26-May-2022 shortLabel SwissProt Aln. longLabel UCSC alignment of SwissProt proteins to genome - 26-May-2022 priority 1 parent uniprot26-May-2022 visibility hide type bigPsl bigDataUrl 26-May-2022/unipAliSwissprot.bb searchIndex name,acc urls acc="http://www.uniprot.org/uniprot/$$" hgncId="https://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=$$" labelFields acc,uniprotName,geneName,hgncSym,refSeq,refSeqProt,ensProt,uniprotName mouseOverField protFullNames itemRgb off color 2,12,120 indelDoubleInsert on indelQueryInsert on baseColorTickColor contrastingColor baseColorUseCds given baseColorDefault genomicCodons showDiffBasesAllScales on track unipAliTrembl26-May-2022 shortLabel TrEMBL Aln. longLabel UCSC alignment of TrEMBL proteins to genome - 26-May-2022 priority 2 parent uniprot26-May-2022 visibility dense type bigPsl bigDataUrl 26-May-2022/unipAliTrembl.bb searchIndex name,acc urls acc="http://www.uniprot.org/uniprot/$$" hgncId="https://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=$$" labelFields acc,uniprotName,geneName,hgncSym,refSeq,refSeqProt,ensProt,uniprotName mouseOverField protFullNames itemRgb off color 0,150,250 indelDoubleInsert on indelQueryInsert on baseColorTickColor contrastingColor baseColorUseCds given baseColorDefault genomicCodons showDiffBasesAllScales on track unipLocSignal26-May-2022 shortLabel Signal Peptide longLabel UniProt Signal Peptides - 26-May-2022 priority 3 parent uniprot26-May-2022 visibility dense type bigBed 12 + bigDataUrl 26-May-2022/unipLocSignal.bb color 255,0,150 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocExtra26-May-2022 shortLabel Extracellular longLabel UniProt Extracellular Domain - 26-May-2022 priority 4 parent uniprot26-May-2022 visibility dense type bigBed 12 + bigDataUrl 26-May-2022/unipLocExtra.bb color 0,150,255 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocTransMemb26-May-2022 shortLabel Transmembrane longLabel UniProt Transmembrane Domains - 26-May-2022 priority 5 parent uniprot26-May-2022 visibility dense type bigBed 12 + bigDataUrl 26-May-2022/unipLocTransMemb.bb color 0,150,0 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocCytopl26-May-2022 shortLabel Cytoplasmic longLabel UniProt Cytoplasmic Domains - 26-May-2022 priority 6 parent uniprot26-May-2022 visibility dense type bigBed 12 + bigDataUrl 26-May-2022/unipLocCytopl.bb color 255,150,0 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipChain26-May-2022 shortLabel Chains longLabel UniProt Mature Protein Products (Polypeptide Chains) - 26-May-2022 priority 7 parent uniprot26-May-2022 visibility dense type bigBed 12 + bigDataUrl 26-May-2022/unipChain.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#ptm_processing" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipInterest26-May-2022 shortLabel Interest longLabel UniProt Regions of Interest - 26-May-2022 priority 4 parent uniprot26-May-2022 visibility dense type bigBed 12 + bigDataUrl 26-May-2022/unipInterest.bb itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipDomain26-May-2022 shortLabel Domains longLabel UniProt Domains - 26-May-2022 priority 8 parent uniprot26-May-2022 visibility dense type bigBed 12 + bigDataUrl 26-May-2022/unipDomain.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipDisulfBond26-May-2022 shortLabel Disulf. Bonds longLabel UniProt Disulfide Bonds - 26-May-2022 priority 8 parent uniprot26-May-2022 visibility dense type bigBed 12 + bigDataUrl 26-May-2022/unipDisulfBond.bb filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipModif26-May-2022 shortLabel AA Modifications longLabel UniProt Amino Acid Modifications - 26-May-2022 priority 9 parent uniprot26-May-2022 visibility dense type bigBed 12 + bigDataUrl 26-May-2022/unipModif.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#aaMod_section" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipMut26-May-2022 shortLabel Mutations longLabel UniProt Amino Acid Mutations - 26-May-2022 priority 10 parent uniprot26-May-2022 visibility dense type bigBed 12 + bigDataUrl 26-May-2022/unipMut.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#pathology_and_biotech" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" variationId="http://www.uniprot.org/uniprot/$$" track unipStruct26-May-2022 shortLabel Structure longLabel UniProt Protein Primary/Secondary Structure Annotations - 26-May-2022 priority 11 parent uniprot26-May-2022 visibility hide type bigBed 12 + bigDataUrl 26-May-2022/unipStruct.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#structure" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipOther26-May-2022 shortLabel Other Annot. longLabel UniProt Other Annotations - 26-May-2022 priority 11 parent uniprot26-May-2022 visibility dense type bigBed 12 + bigDataUrl 26-May-2022/unipOther.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipRepeat26-May-2022 shortLabel Repeats longLabel UniProt Repeats - 26-May-2022 priority 12 parent uniprot26-May-2022 visibility dense type bigBed 12 + bigDataUrl 26-May-2022/unipRepeat.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipConflict26-May-2022 shortLabel Seq. Conflicts longLabel UniProt Sequence Conflicts - 26-May-2022 priority 13 parent uniprot26-May-2022 off visibility dense type bigBed 12 + bigDataUrl 26-May-2022/unipConflict.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#Sequence_conflict_section" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) #searchTable unipAliSwissprot #searchType bigBed #searchDescription UniProt/SwissProt manually curated Proteins mapped to the genome by UCSC #searchTable unipAliTrembl #searchType bigBed #searchDescription UniProt/TrEMBL predicted Proteins mapped to the genome by UCSC # this file is used for building the archive track hub, it is template, not the final file. # doUniprot builds the final file. # if you modify this file, make sure that you also modify the original of the native track in trackDb/uniprot.ra track uniprot2020_06 shortLabel UniProt 2020_06 longLabel UniProt SwissProt/TrEMBL Protein Annotations, release 2020_06 #group genes visibility hide type bigBed 12 + exonNumbers off compositeTrack on allButtonPair on mouseOverField comments urls uniProtId="http://www.uniprot.org/uniprot/$$#section_features" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" itemRgb on #dataVersion /gbdb/$D/uniprot/version.txt hideEmptySubtracks on track unipAliSwissprot2020_06 shortLabel SwissProt Aln. longLabel UCSC alignment of SwissProt proteins to genome - 2020_06 priority 1 parent uniprot2020_06 visibility hide type bigPsl bigDataUrl 2020_06/unipAliSwissprot.bb searchIndex name,acc urls acc="http://www.uniprot.org/uniprot/$$" hgncId="https://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=$$" labelFields acc,uniprotName,geneName,hgncSym,refSeq,refSeqProt,ensProt,uniprotName mouseOverField protFullNames itemRgb off color 2,12,120 indelDoubleInsert on indelQueryInsert on baseColorTickColor contrastingColor baseColorUseCds given baseColorDefault genomicCodons showDiffBasesAllScales on track unipAliTrembl2020_06 shortLabel TrEMBL Aln. longLabel UCSC alignment of TrEMBL proteins to genome - 2020_06 priority 2 parent uniprot2020_06 visibility dense type bigPsl bigDataUrl 2020_06/unipAliTrembl.bb searchIndex name,acc urls acc="http://www.uniprot.org/uniprot/$$" hgncId="https://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=$$" labelFields acc,uniprotName,geneName,hgncSym,refSeq,refSeqProt,ensProt,uniprotName mouseOverField protFullNames itemRgb off color 0,150,250 indelDoubleInsert on indelQueryInsert on baseColorTickColor contrastingColor baseColorUseCds given baseColorDefault genomicCodons showDiffBasesAllScales on track unipLocSignal2020_06 shortLabel Signal Peptide longLabel UniProt Signal Peptides - 2020_06 priority 3 parent uniprot2020_06 visibility dense type bigBed 12 + bigDataUrl 2020_06/unipLocSignal.bb color 255,0,150 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocExtra2020_06 shortLabel Extracellular longLabel UniProt Extracellular Domain - 2020_06 priority 4 parent uniprot2020_06 visibility dense type bigBed 12 + bigDataUrl 2020_06/unipLocExtra.bb color 0,150,255 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocTransMemb2020_06 shortLabel Transmembrane longLabel UniProt Transmembrane Domains - 2020_06 priority 5 parent uniprot2020_06 visibility dense type bigBed 12 + bigDataUrl 2020_06/unipLocTransMemb.bb color 0,150,0 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocCytopl2020_06 shortLabel Cytoplasmic longLabel UniProt Cytoplasmic Domains - 2020_06 priority 6 parent uniprot2020_06 visibility dense type bigBed 12 + bigDataUrl 2020_06/unipLocCytopl.bb color 255,150,0 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipChain2020_06 shortLabel Chains longLabel UniProt Mature Protein Products (Polypeptide Chains) - 2020_06 priority 7 parent uniprot2020_06 visibility dense type bigBed 12 + bigDataUrl 2020_06/unipChain.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#ptm_processing" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipInterest2020_06 shortLabel Interest longLabel UniProt Regions of Interest - 2020_06 priority 4 parent uniprot2020_06 visibility dense type bigBed 12 + bigDataUrl 2020_06/unipInterest.bb itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipDomain2020_06 shortLabel Domains longLabel UniProt Domains - 2020_06 priority 8 parent uniprot2020_06 visibility dense type bigBed 12 + bigDataUrl 2020_06/unipDomain.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipDisulfBond2020_06 shortLabel Disulf. Bonds longLabel UniProt Disulfide Bonds - 2020_06 priority 8 parent uniprot2020_06 visibility dense type bigBed 12 + bigDataUrl 2020_06/unipDisulfBond.bb filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipModif2020_06 shortLabel AA Modifications longLabel UniProt Amino Acid Modifications - 2020_06 priority 9 parent uniprot2020_06 visibility dense type bigBed 12 + bigDataUrl 2020_06/unipModif.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#aaMod_section" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipMut2020_06 shortLabel Mutations longLabel UniProt Amino Acid Mutations - 2020_06 priority 10 parent uniprot2020_06 visibility dense type bigBed 12 + bigDataUrl 2020_06/unipMut.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#pathology_and_biotech" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" variationId="http://www.uniprot.org/uniprot/$$" track unipStruct2020_06 shortLabel Structure longLabel UniProt Protein Primary/Secondary Structure Annotations - 2020_06 priority 11 parent uniprot2020_06 visibility hide type bigBed 12 + bigDataUrl 2020_06/unipStruct.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#structure" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipOther2020_06 shortLabel Other Annot. longLabel UniProt Other Annotations - 2020_06 priority 11 parent uniprot2020_06 visibility dense type bigBed 12 + bigDataUrl 2020_06/unipOther.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipRepeat2020_06 shortLabel Repeats longLabel UniProt Repeats - 2020_06 priority 12 parent uniprot2020_06 visibility dense type bigBed 12 + bigDataUrl 2020_06/unipRepeat.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipConflict2020_06 shortLabel Seq. Conflicts longLabel UniProt Sequence Conflicts - 2020_06 priority 13 parent uniprot2020_06 off visibility dense type bigBed 12 + bigDataUrl 2020_06/unipConflict.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#Sequence_conflict_section" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) #searchTable unipAliSwissprot #searchType bigBed #searchDescription UniProt/SwissProt manually curated Proteins mapped to the genome by UCSC #searchTable unipAliTrembl #searchType bigBed #searchDescription UniProt/TrEMBL predicted Proteins mapped to the genome by UCSC track uniprot2022_03 shortLabel UniProt 2022_03 longLabel UniProt SwissProt/TrEMBL Protein Annotations, release 2022_03 visibility hide type bigBed 12 + exonNumbers off compositeTrack on allButtonPair on mouseOverField comments urls uniProtId="http://www.uniprot.org/uniprot/$$#section_features" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" itemRgb on hideEmptySubtracks on track unipAliSwissprot2022_03 shortLabel SwissProt Aln. longLabel UCSC alignment of SwissProt proteins to genome - 2022_03 priority 1 parent uniprot2022_03 visibility hide type bigPsl bigDataUrl 2022_03/unipAliSwissprot.bb searchIndex name,acc urls acc="http://www.uniprot.org/uniprot/$$" hgncId="https://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=$$" labelFields acc,uniprotName,geneName,hgncSym,refSeq,refSeqProt,ensProt,uniprotName mouseOverField protFullNames itemRgb off color 2,12,120 indelDoubleInsert on indelQueryInsert on baseColorTickColor contrastingColor baseColorUseCds given baseColorDefault genomicCodons showDiffBasesAllScales on track unipAliTrembl2022_03 shortLabel TrEMBL Aln. longLabel UCSC alignment of TrEMBL proteins to genome - 2022_03 priority 2 parent uniprot2022_03 visibility dense type bigPsl bigDataUrl 2022_03/unipAliTrembl.bb searchIndex name,acc urls acc="http://www.uniprot.org/uniprot/$$" hgncId="https://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=$$" labelFields acc,uniprotName,geneName,hgncSym,refSeq,refSeqProt,ensProt,uniprotName mouseOverField protFullNames itemRgb off color 0,150,250 indelDoubleInsert on indelQueryInsert on baseColorTickColor contrastingColor baseColorUseCds given baseColorDefault genomicCodons showDiffBasesAllScales on track unipLocSignal2022_03 shortLabel Signal Peptide longLabel UniProt Signal Peptides - 2022_03 priority 3 parent uniprot2022_03 visibility dense type bigBed 12 + bigDataUrl 2022_03/unipLocSignal.bb color 255,0,150 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocExtra2022_03 shortLabel Extracellular longLabel UniProt Extracellular Domain - 2022_03 priority 4 parent uniprot2022_03 visibility dense type bigBed 12 + bigDataUrl 2022_03/unipLocExtra.bb color 0,150,255 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocTransMemb2022_03 shortLabel Transmembrane longLabel UniProt Transmembrane Domains - 2022_03 priority 5 parent uniprot2022_03 visibility dense type bigBed 12 + bigDataUrl 2022_03/unipLocTransMemb.bb color 0,150,0 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocCytopl2022_03 shortLabel Cytoplasmic longLabel UniProt Cytoplasmic Domains - 2022_03 priority 6 parent uniprot2022_03 visibility dense type bigBed 12 + bigDataUrl 2022_03/unipLocCytopl.bb color 255,150,0 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipChain2022_03 shortLabel Chains longLabel UniProt Mature Protein Products (Polypeptide Chains) - 2022_03 priority 7 parent uniprot2022_03 visibility dense type bigBed 12 + bigDataUrl 2022_03/unipChain.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#ptm_processing" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipInterest2022_03 shortLabel Interest longLabel UniProt Regions of Interest - 2022_03 priority 4 parent uniprot2022_03 visibility dense type bigBed 12 + bigDataUrl 2022_03/unipInterest.bb itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipDomain2022_03 shortLabel Domains longLabel UniProt Domains - 2022_03 priority 8 parent uniprot2022_03 visibility dense type bigBed 12 + bigDataUrl 2022_03/unipDomain.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipDisulfBond2022_03 shortLabel Disulf. Bonds longLabel UniProt Disulfide Bonds - 2022_03 priority 8 parent uniprot2022_03 visibility dense type bigBed 12 + bigDataUrl 2022_03/unipDisulfBond.bb filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipModif2022_03 shortLabel AA Modifications longLabel UniProt Amino Acid Modifications - 2022_03 priority 9 parent uniprot2022_03 visibility dense type bigBed 12 + bigDataUrl 2022_03/unipModif.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#aaMod_section" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipMut2022_03 shortLabel Mutations longLabel UniProt Amino Acid Mutations - 2022_03 priority 10 parent uniprot2022_03 visibility dense type bigBed 12 + bigDataUrl 2022_03/unipMut.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#pathology_and_biotech" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" variationId="http://www.uniprot.org/uniprot/$$" track unipStruct2022_03 shortLabel Structure longLabel UniProt Protein Primary/Secondary Structure Annotations - 2022_03 priority 11 parent uniprot2022_03 visibility hide type bigBed 12 + bigDataUrl 2022_03/unipStruct.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#structure" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipOther2022_03 shortLabel Other Annot. longLabel UniProt Other Annotations - 2022_03 priority 11 parent uniprot2022_03 visibility dense type bigBed 12 + bigDataUrl 2022_03/unipOther.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipRepeat2022_03 shortLabel Repeats longLabel UniProt Repeats - 2022_03 priority 12 parent uniprot2022_03 visibility dense type bigBed 12 + bigDataUrl 2022_03/unipRepeat.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipConflict2022_03 shortLabel Seq. Conflicts longLabel UniProt Sequence Conflicts - 2022_03 priority 13 parent uniprot2022_03 off visibility dense type bigBed 12 + bigDataUrl 2022_03/unipConflict.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#Sequence_conflict_section" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track uniprot14-Oct-2022 shortLabel UniProt 14-Oct-2022 longLabel UniProt SwissProt/TrEMBL Protein Annotations, release 14-Oct-2022 visibility hide type bigBed 12 + exonNumbers off compositeTrack on allButtonPair on mouseOverField comments urls uniProtId="http://www.uniprot.org/uniprot/$$#section_features" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" itemRgb on hideEmptySubtracks on track unipAliSwissprot14-Oct-2022 shortLabel SwissProt Aln. longLabel UCSC alignment of SwissProt proteins to genome - 14-Oct-2022 priority 1 parent uniprot14-Oct-2022 visibility hide type bigPsl bigDataUrl 14-Oct-2022/unipAliSwissprot.bb searchIndex name,acc urls acc="http://www.uniprot.org/uniprot/$$" hgncId="https://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=$$" labelFields acc,uniprotName,geneName,hgncSym,refSeq,refSeqProt,ensProt,uniprotName mouseOverField protFullNames itemRgb off color 2,12,120 indelDoubleInsert on indelQueryInsert on baseColorTickColor contrastingColor baseColorUseCds given baseColorDefault genomicCodons showDiffBasesAllScales on track unipAliTrembl14-Oct-2022 shortLabel TrEMBL Aln. longLabel UCSC alignment of TrEMBL proteins to genome - 14-Oct-2022 priority 2 parent uniprot14-Oct-2022 visibility dense type bigPsl bigDataUrl 14-Oct-2022/unipAliTrembl.bb searchIndex name,acc urls acc="http://www.uniprot.org/uniprot/$$" hgncId="https://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=$$" labelFields acc,uniprotName,geneName,hgncSym,refSeq,refSeqProt,ensProt,uniprotName mouseOverField protFullNames itemRgb off color 0,150,250 indelDoubleInsert on indelQueryInsert on baseColorTickColor contrastingColor baseColorUseCds given baseColorDefault genomicCodons showDiffBasesAllScales on track unipLocSignal14-Oct-2022 shortLabel Signal Peptide longLabel UniProt Signal Peptides - 14-Oct-2022 priority 3 parent uniprot14-Oct-2022 visibility dense type bigBed 12 + bigDataUrl 14-Oct-2022/unipLocSignal.bb color 255,0,150 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocExtra14-Oct-2022 shortLabel Extracellular longLabel UniProt Extracellular Domain - 14-Oct-2022 priority 4 parent uniprot14-Oct-2022 visibility dense type bigBed 12 + bigDataUrl 14-Oct-2022/unipLocExtra.bb color 0,150,255 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocTransMemb14-Oct-2022 shortLabel Transmembrane longLabel UniProt Transmembrane Domains - 14-Oct-2022 priority 5 parent uniprot14-Oct-2022 visibility dense type bigBed 12 + bigDataUrl 14-Oct-2022/unipLocTransMemb.bb color 0,150,0 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocCytopl14-Oct-2022 shortLabel Cytoplasmic longLabel UniProt Cytoplasmic Domains - 14-Oct-2022 priority 6 parent uniprot14-Oct-2022 visibility dense type bigBed 12 + bigDataUrl 14-Oct-2022/unipLocCytopl.bb color 255,150,0 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipChain14-Oct-2022 shortLabel Chains longLabel UniProt Mature Protein Products (Polypeptide Chains) - 14-Oct-2022 priority 7 parent uniprot14-Oct-2022 visibility dense type bigBed 12 + bigDataUrl 14-Oct-2022/unipChain.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#ptm_processing" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipInterest14-Oct-2022 shortLabel Interest longLabel UniProt Regions of Interest - 14-Oct-2022 priority 4 parent uniprot14-Oct-2022 visibility dense type bigBed 12 + bigDataUrl 14-Oct-2022/unipInterest.bb itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipDomain14-Oct-2022 shortLabel Domains longLabel UniProt Domains - 14-Oct-2022 priority 8 parent uniprot14-Oct-2022 visibility dense type bigBed 12 + bigDataUrl 14-Oct-2022/unipDomain.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipDisulfBond14-Oct-2022 shortLabel Disulf. Bonds longLabel UniProt Disulfide Bonds - 14-Oct-2022 priority 8 parent uniprot14-Oct-2022 visibility dense type bigBed 12 + bigDataUrl 14-Oct-2022/unipDisulfBond.bb filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipModif14-Oct-2022 shortLabel AA Modifications longLabel UniProt Amino Acid Modifications - 14-Oct-2022 priority 9 parent uniprot14-Oct-2022 visibility dense type bigBed 12 + bigDataUrl 14-Oct-2022/unipModif.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#aaMod_section" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipMut14-Oct-2022 shortLabel Mutations longLabel UniProt Amino Acid Mutations - 14-Oct-2022 priority 10 parent uniprot14-Oct-2022 visibility dense type bigBed 12 + bigDataUrl 14-Oct-2022/unipMut.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#pathology_and_biotech" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" variationId="http://www.uniprot.org/uniprot/$$" track unipStruct14-Oct-2022 shortLabel Structure longLabel UniProt Protein Primary/Secondary Structure Annotations - 14-Oct-2022 priority 11 parent uniprot14-Oct-2022 visibility hide type bigBed 12 + bigDataUrl 14-Oct-2022/unipStruct.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#structure" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipOther14-Oct-2022 shortLabel Other Annot. longLabel UniProt Other Annotations - 14-Oct-2022 priority 11 parent uniprot14-Oct-2022 visibility dense type bigBed 12 + bigDataUrl 14-Oct-2022/unipOther.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipRepeat14-Oct-2022 shortLabel Repeats longLabel UniProt Repeats - 14-Oct-2022 priority 12 parent uniprot14-Oct-2022 visibility dense type bigBed 12 + bigDataUrl 14-Oct-2022/unipRepeat.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipConflict14-Oct-2022 shortLabel Seq. Conflicts longLabel UniProt Sequence Conflicts - 14-Oct-2022 priority 13 parent uniprot14-Oct-2022 off visibility dense type bigBed 12 + bigDataUrl 14-Oct-2022/unipConflict.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#Sequence_conflict_section" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) # this file is used for building the archive track hub, it is template, not the final file. # doUniprot builds the final file. # if you modify this file, make sure that you also modify the original of the native track in trackDb/uniprot.ra track uniprot13-Dec-2021 shortLabel UniProt 13-Dec-2021 longLabel UniProt SwissProt/TrEMBL Protein Annotations, release 13-Dec-2021 #group genes visibility hide type bigBed 12 + exonNumbers off compositeTrack on allButtonPair on mouseOverField comments urls uniProtId="http://www.uniprot.org/uniprot/$$#section_features" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" itemRgb on #dataVersion /gbdb/$D/uniprot/version.txt hideEmptySubtracks on track unipAliSwissprot13-Dec-2021 shortLabel SwissProt Aln. longLabel UCSC alignment of SwissProt proteins to genome - 13-Dec-2021 priority 1 parent uniprot13-Dec-2021 visibility hide type bigPsl bigDataUrl 13-Dec-2021/unipAliSwissprot.bb searchIndex name,acc urls acc="http://www.uniprot.org/uniprot/$$" hgncId="https://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=$$" labelFields acc,uniprotName,geneName,hgncSym,refSeq,refSeqProt,ensProt,uniprotName mouseOverField protFullNames itemRgb off color 2,12,120 indelDoubleInsert on indelQueryInsert on baseColorTickColor contrastingColor baseColorUseCds given baseColorDefault genomicCodons showDiffBasesAllScales on track unipAliTrembl13-Dec-2021 shortLabel TrEMBL Aln. longLabel UCSC alignment of TrEMBL proteins to genome - 13-Dec-2021 priority 2 parent uniprot13-Dec-2021 visibility dense type bigPsl bigDataUrl 13-Dec-2021/unipAliTrembl.bb searchIndex name,acc urls acc="http://www.uniprot.org/uniprot/$$" hgncId="https://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=$$" labelFields acc,uniprotName,geneName,hgncSym,refSeq,refSeqProt,ensProt,uniprotName mouseOverField protFullNames itemRgb off color 0,150,250 indelDoubleInsert on indelQueryInsert on baseColorTickColor contrastingColor baseColorUseCds given baseColorDefault genomicCodons showDiffBasesAllScales on track unipLocSignal13-Dec-2021 shortLabel Signal Peptide longLabel UniProt Signal Peptides - 13-Dec-2021 priority 3 parent uniprot13-Dec-2021 visibility dense type bigBed 12 + bigDataUrl 13-Dec-2021/unipLocSignal.bb color 255,0,150 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocExtra13-Dec-2021 shortLabel Extracellular longLabel UniProt Extracellular Domain - 13-Dec-2021 priority 4 parent uniprot13-Dec-2021 visibility dense type bigBed 12 + bigDataUrl 13-Dec-2021/unipLocExtra.bb color 0,150,255 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocTransMemb13-Dec-2021 shortLabel Transmembrane longLabel UniProt Transmembrane Domains - 13-Dec-2021 priority 5 parent uniprot13-Dec-2021 visibility dense type bigBed 12 + bigDataUrl 13-Dec-2021/unipLocTransMemb.bb color 0,150,0 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocCytopl13-Dec-2021 shortLabel Cytoplasmic longLabel UniProt Cytoplasmic Domains - 13-Dec-2021 priority 6 parent uniprot13-Dec-2021 visibility dense type bigBed 12 + bigDataUrl 13-Dec-2021/unipLocCytopl.bb color 255,150,0 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipChain13-Dec-2021 shortLabel Chains longLabel UniProt Mature Protein Products (Polypeptide Chains) - 13-Dec-2021 priority 7 parent uniprot13-Dec-2021 visibility dense type bigBed 12 + bigDataUrl 13-Dec-2021/unipChain.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#ptm_processing" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipInterest13-Dec-2021 shortLabel Interest longLabel UniProt Regions of Interest - 13-Dec-2021 priority 4 parent uniprot13-Dec-2021 visibility dense type bigBed 12 + bigDataUrl 13-Dec-2021/unipInterest.bb itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipDomain13-Dec-2021 shortLabel Domains longLabel UniProt Domains - 13-Dec-2021 priority 8 parent uniprot13-Dec-2021 visibility dense type bigBed 12 + bigDataUrl 13-Dec-2021/unipDomain.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipDisulfBond13-Dec-2021 shortLabel Disulf. Bonds longLabel UniProt Disulfide Bonds - 13-Dec-2021 priority 8 parent uniprot13-Dec-2021 visibility dense type bigBed 12 + bigDataUrl 13-Dec-2021/unipDisulfBond.bb filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipModif13-Dec-2021 shortLabel AA Modifications longLabel UniProt Amino Acid Modifications - 13-Dec-2021 priority 9 parent uniprot13-Dec-2021 visibility dense type bigBed 12 + bigDataUrl 13-Dec-2021/unipModif.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#aaMod_section" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipMut13-Dec-2021 shortLabel Mutations longLabel UniProt Amino Acid Mutations - 13-Dec-2021 priority 10 parent uniprot13-Dec-2021 visibility dense type bigBed 12 + bigDataUrl 13-Dec-2021/unipMut.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#pathology_and_biotech" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" variationId="http://www.uniprot.org/uniprot/$$" track unipStruct13-Dec-2021 shortLabel Structure longLabel UniProt Protein Primary/Secondary Structure Annotations - 13-Dec-2021 priority 11 parent uniprot13-Dec-2021 visibility hide type bigBed 12 + bigDataUrl 13-Dec-2021/unipStruct.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#structure" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipOther13-Dec-2021 shortLabel Other Annot. longLabel UniProt Other Annotations - 13-Dec-2021 priority 11 parent uniprot13-Dec-2021 visibility dense type bigBed 12 + bigDataUrl 13-Dec-2021/unipOther.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipRepeat13-Dec-2021 shortLabel Repeats longLabel UniProt Repeats - 13-Dec-2021 priority 12 parent uniprot13-Dec-2021 visibility dense type bigBed 12 + bigDataUrl 13-Dec-2021/unipRepeat.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipConflict13-Dec-2021 shortLabel Seq. Conflicts longLabel UniProt Sequence Conflicts - 13-Dec-2021 priority 13 parent uniprot13-Dec-2021 off visibility dense type bigBed 12 + bigDataUrl 13-Dec-2021/unipConflict.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#Sequence_conflict_section" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) #searchTable unipAliSwissprot #searchType bigBed #searchDescription UniProt/SwissProt manually curated Proteins mapped to the genome by UCSC #searchTable unipAliTrembl #searchType bigBed #searchDescription UniProt/TrEMBL predicted Proteins mapped to the genome by UCSC # this file is used for building the archive track hub, it is template, not the final file. # doUniprot builds the final file. # if you modify this file, make sure that you also modify the original of the native track in trackDb/uniprot.ra track uniprot21-Mar-2022 shortLabel UniProt 21-Mar-2022 longLabel UniProt SwissProt/TrEMBL Protein Annotations, release 21-Mar-2022 #group genes visibility hide type bigBed 12 + exonNumbers off compositeTrack on allButtonPair on mouseOverField comments urls uniProtId="http://www.uniprot.org/uniprot/$$#section_features" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" itemRgb on #dataVersion /gbdb/$D/uniprot/version.txt hideEmptySubtracks on track unipAliSwissprot21-Mar-2022 shortLabel SwissProt Aln. longLabel UCSC alignment of SwissProt proteins to genome - 21-Mar-2022 priority 1 parent uniprot21-Mar-2022 visibility hide type bigPsl bigDataUrl 21-Mar-2022/unipAliSwissprot.bb searchIndex name,acc urls acc="http://www.uniprot.org/uniprot/$$" hgncId="https://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=$$" labelFields acc,uniprotName,geneName,hgncSym,refSeq,refSeqProt,ensProt,uniprotName mouseOverField protFullNames itemRgb off color 2,12,120 indelDoubleInsert on indelQueryInsert on baseColorTickColor contrastingColor baseColorUseCds given baseColorDefault genomicCodons showDiffBasesAllScales on track unipAliTrembl21-Mar-2022 shortLabel TrEMBL Aln. longLabel UCSC alignment of TrEMBL proteins to genome - 21-Mar-2022 priority 2 parent uniprot21-Mar-2022 visibility dense type bigPsl bigDataUrl 21-Mar-2022/unipAliTrembl.bb searchIndex name,acc urls acc="http://www.uniprot.org/uniprot/$$" hgncId="https://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=$$" labelFields acc,uniprotName,geneName,hgncSym,refSeq,refSeqProt,ensProt,uniprotName mouseOverField protFullNames itemRgb off color 0,150,250 indelDoubleInsert on indelQueryInsert on baseColorTickColor contrastingColor baseColorUseCds given baseColorDefault genomicCodons showDiffBasesAllScales on track unipLocSignal21-Mar-2022 shortLabel Signal Peptide longLabel UniProt Signal Peptides - 21-Mar-2022 priority 3 parent uniprot21-Mar-2022 visibility dense type bigBed 12 + bigDataUrl 21-Mar-2022/unipLocSignal.bb color 255,0,150 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocExtra21-Mar-2022 shortLabel Extracellular longLabel UniProt Extracellular Domain - 21-Mar-2022 priority 4 parent uniprot21-Mar-2022 visibility dense type bigBed 12 + bigDataUrl 21-Mar-2022/unipLocExtra.bb color 0,150,255 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocTransMemb21-Mar-2022 shortLabel Transmembrane longLabel UniProt Transmembrane Domains - 21-Mar-2022 priority 5 parent uniprot21-Mar-2022 visibility dense type bigBed 12 + bigDataUrl 21-Mar-2022/unipLocTransMemb.bb color 0,150,0 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipLocCytopl21-Mar-2022 shortLabel Cytoplasmic longLabel UniProt Cytoplasmic Domains - 21-Mar-2022 priority 6 parent uniprot21-Mar-2022 visibility dense type bigBed 12 + bigDataUrl 21-Mar-2022/unipLocCytopl.bb color 255,150,0 itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipChain21-Mar-2022 shortLabel Chains longLabel UniProt Mature Protein Products (Polypeptide Chains) - 21-Mar-2022 priority 7 parent uniprot21-Mar-2022 visibility dense type bigBed 12 + bigDataUrl 21-Mar-2022/unipChain.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#ptm_processing" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipInterest21-Mar-2022 shortLabel Interest longLabel UniProt Regions of Interest - 21-Mar-2022 priority 4 parent uniprot21-Mar-2022 visibility dense type bigBed 12 + bigDataUrl 21-Mar-2022/unipInterest.bb itemRgb off filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipDomain21-Mar-2022 shortLabel Domains longLabel UniProt Domains - 21-Mar-2022 priority 8 parent uniprot21-Mar-2022 visibility dense type bigBed 12 + bigDataUrl 21-Mar-2022/unipDomain.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipDisulfBond21-Mar-2022 shortLabel Disulf. Bonds longLabel UniProt Disulfide Bonds - 21-Mar-2022 priority 8 parent uniprot21-Mar-2022 visibility dense type bigBed 12 + bigDataUrl 21-Mar-2022/unipDisulfBond.bb filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipModif21-Mar-2022 shortLabel AA Modifications longLabel UniProt Amino Acid Modifications - 21-Mar-2022 priority 9 parent uniprot21-Mar-2022 visibility dense type bigBed 12 + bigDataUrl 21-Mar-2022/unipModif.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#aaMod_section" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipMut21-Mar-2022 shortLabel Mutations longLabel UniProt Amino Acid Mutations - 21-Mar-2022 priority 10 parent uniprot21-Mar-2022 visibility dense type bigBed 12 + bigDataUrl 21-Mar-2022/unipMut.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#pathology_and_biotech" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" variationId="http://www.uniprot.org/uniprot/$$" track unipStruct21-Mar-2022 shortLabel Structure longLabel UniProt Protein Primary/Secondary Structure Annotations - 21-Mar-2022 priority 11 parent uniprot21-Mar-2022 visibility hide type bigBed 12 + bigDataUrl 21-Mar-2022/unipStruct.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#structure" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipOther21-Mar-2022 shortLabel Other Annot. longLabel UniProt Other Annotations - 21-Mar-2022 priority 11 parent uniprot21-Mar-2022 visibility dense type bigBed 12 + bigDataUrl 21-Mar-2022/unipOther.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipRepeat21-Mar-2022 shortLabel Repeats longLabel UniProt Repeats - 21-Mar-2022 priority 12 parent uniprot21-Mar-2022 visibility dense type bigBed 12 + bigDataUrl 21-Mar-2022/unipRepeat.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#family_and_domains" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) track unipConflict21-Mar-2022 shortLabel Seq. Conflicts longLabel UniProt Sequence Conflicts - 21-Mar-2022 priority 13 parent uniprot21-Mar-2022 off visibility dense type bigBed 12 + bigDataUrl 21-Mar-2022/unipConflict.bb urls uniProtId="http://www.uniprot.org/uniprot/$$#Sequence_conflict_section" pmids="https://www.ncbi.nlm.nih.gov/pubmed/$$" filterValues.status Manually reviewed (Swiss-Prot),Unreviewed (TrEMBL) #searchTable unipAliSwissprot #searchType bigBed #searchDescription UniProt/SwissProt manually curated Proteins mapped to the genome by UCSC #searchTable unipAliTrembl #searchType bigBed #searchDescription UniProt/TrEMBL predicted Proteins mapped to the genome by UCSC