This directory contains zipped multiple alignments of the 
human (hg17, May 2004), mouse (mm6, March 2005), and rat 
(rn3, June 2003) assemblies to the dog (canFam2, May 2005) 
assembly. The chr*.maf.gz files each contain all the 
alignments to that particular dog chromosome.  

For a description of multiple alignment format (MAF), see
http://genome.ucsc.edu/goldenPath/help/maf.html.

If you plan to download a large file or multiple files from 
this directory, we recommend that you use ftp rather than 
downloading the files via our website. To do so, ftp to 
hgdownload.cse.ucsc.edu, then go to the directory 
goldenPath/canFam2/multiz4way/. To download multiple files, 
use the "mget" command:

    mget <filename1> <filename2> ...
    - or -
    mget -a (to download all the files in the directory) 

All the tables in this directory are freely usable for any 
purpose. 

The dog genome sequence is made freely available by the Dog Genome Sequencing
Project. Please cite the following publication when using these data:

Lindblad-Toh K, et al. Genome sequence, comparative analysis and haplotype
structure of the domestic dog. Nature. 2005 Dec 8;438:803-19.

      Name                    Last modified      Size  Description
Parent Directory - chr1.maf.gz 2005-12-13 16:12 89M chr2.maf.gz 2005-12-13 16:20 66M chr3.maf.gz 2005-12-13 16:27 69M chr4.maf.gz 2005-12-13 16:31 69M chr5.maf.gz 2005-12-13 16:32 72M chr6.maf.gz 2005-12-13 16:33 57M chr7.maf.gz 2005-12-13 16:34 63M chr8.maf.gz 2005-12-13 16:35 57M chr9.maf.gz 2005-12-13 16:36 50M chr10.maf.gz 2005-12-13 16:13 53M chr11.maf.gz 2005-12-13 16:14 58M chr12.maf.gz 2005-12-13 16:14 53M chr13.maf.gz 2005-12-13 16:15 48M chr14.maf.gz 2005-12-13 16:16 49M chr15.maf.gz 2005-12-13 16:17 50M chr16.maf.gz 2005-12-13 16:17 43M chr17.maf.gz 2005-12-13 16:18 50M chr18.maf.gz 2005-12-13 16:18 41M chr19.maf.gz 2005-12-13 16:19 37M chr20.maf.gz 2005-12-13 16:21 45M chr21.maf.gz 2005-12-13 16:21 38M chr22.maf.gz 2005-12-13 16:22 45M chr23.maf.gz 2005-12-13 16:22 39M chr24.maf.gz 2005-12-13 16:23 38M chr25.maf.gz 2005-12-13 16:24 38M chr26.maf.gz 2005-12-13 16:24 26M chr27.maf.gz 2005-12-13 16:25 34M chr28.maf.gz 2005-12-13 16:25 34M chr29.maf.gz 2005-12-13 16:25 31M chr30.maf.gz 2005-12-13 16:27 32M chr31.maf.gz 2005-12-13 16:27 28M chr32.maf.gz 2005-12-13 16:28 28M chr33.maf.gz 2005-12-13 16:28 25M chr34.maf.gz 2005-12-13 16:29 32M chr35.maf.gz 2005-12-13 16:29 20M chr36.maf.gz 2005-12-13 16:29 25M chr37.maf.gz 2005-12-13 16:30 26M chr38.maf.gz 2005-12-13 16:30 19M chrM.maf.gz 2005-12-13 16:36 22K chrUn.maf.gz 2005-12-13 16:36 10M chrX.maf.gz 2005-12-13 16:37 73M maf/ 2019-11-06 10:41 - md5sum.txt 2005-12-13 16:37 1.9K