This directory contains reciprocal-best netted chains for ce11-strRat2.

 - ce11.strRat2.rbest.net.gz: ce11-referenced recip.best net to strRat2.
 - ce11.strRat2.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from ce11 to strRat2 through the recip.best net.

 - strRat2.ce11.rbest.net.gz: strRat2-referenced recip.best net.
 - strRat2.ce11.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/*.ce11.strRat2.net.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                        Last modified      Size  Description
      Parent Directory                                 -   
      axtRBestNet/                2018-10-25 15:05    -   
      md5sum.txt                  2018-10-25 14:58  244   
      strRat2.ce11.rbest.chain.gz 2018-10-25 14:58  2.4M  
      ce11.strRat2.rbest.chain.gz 2018-10-25 14:58  2.4M  
      strRat2.ce11.rbest.net.gz   2018-10-25 14:58  4.6M  
      ce11.strRat2.rbest.net.gz   2018-10-25 14:58  4.7M