This directory contains reciprocal-best netted chains for galGal6-mm10. - galGal6.mm10.rbest.net.gz: galGal6-referenced recip.best net to mm10. - galGal6.mm10.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from galGal6 to mm10 through the recip.best net. - mm10.galGal6.rbest.net.gz: mm10-referenced recip.best net. - mm10.galGal6.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/galGal6.mm10.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2018-11-09 15:47 - galGal6.mm10.rbest.chain.gz 2018-10-12 13:28 6.0M galGal6.mm10.rbest.net.gz 2018-10-12 13:28 11M md5sum.txt 2018-10-12 13:28 244 mm10.galGal6.rbest.chain.gz 2018-10-12 13:28 6.0M mm10.galGal6.rbest.net.gz 2018-10-12 13:28 11M