This directory contains reciprocal-best netted chains for monDom5-rn6.

 - monDom5.rn6.rbest.net.gz: monDom5-referenced recip.best net to rn6.
 - monDom5.rn6.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from monDom5 to rn6 through the recip.best net.

 - rn6.monDom5.rbest.net.gz: rn6-referenced recip.best net.
 - rn6.monDom5.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/*.monDom5.rn6.net.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                                                    Last modified      Size  Description
Parent Directory - axtRBestNet/ 2017-01-15 03:35 - md5sum.txt 2017-01-13 09:35 240 monDom5.rn6.rbest.chain.gz 2017-01-13 09:34 18M monDom5.rn6.rbest.net.gz 2017-01-13 09:35 34M rn6.monDom5.rbest.chain.gz 2017-01-13 09:34 18M rn6.monDom5.rbest.net.gz 2017-01-13 09:33 29M