This directory contains a dump of the UCSC genome annotation database for
the Jul. 2007 assembly of the orangutan genome (ponAbe2, WUSTL Pongo_albelii-2.0.2) 
The annotations were generated by UCSC and collaborators worldwide.

This assembly was produced by the Genome Sequencing Center at the Washington 
University School of Medicine in St. Louis.
For more information on the orangutan genome, see the project website:
http://genome.wustl.edu/genome.cgi?GENOME=Pongo%20abelii

Files included in this directory (updated nightly):

  - *.sql files:  the MySQL commands used to create the tables

  - *.txt.gz files: the database tables in a tab-delimited format
    compressed with gzip.

To see descriptions of the tables underlying Genome Browser annotation
tracks, select the table in the Table Browser:
  http://genome.ucsc.edu/cgi-bin/hgTables?db=ponAbe2
and click the "describe table schema" button.  There is also a "view
table schema" link on the configuration page for each track.

---------------------------------------------------------------
If you plan to download a large file or multiple files from this 
directory, we recommend you use ftp rather than downloading the files 
via our website. To do so, ftp to hgdownload.cse.ucsc.edu, then go to 
the directory goldenPath/ponAbe2/database/. To download multiple 
files, use the "mget" command:

    mget <filename1> <filename2> ...
    - or -
    mget -a (to download all the files in the directory) 

------------------------------------------------------------------
Alternate methods to ftp access.

Using an rsync command to download the entire directory:
    rsync -avzP rsync://hgdownload.cse.ucsc.edu/goldenPath/ponAbe2/database/ .
For a single file, e.g. gc5BaseBw.txt.gz
    rsync -avzP 
        rsync://hgdownload.cse.ucsc.edu/goldenPath/ponAbe2/database/gc5BaseBw.txt.gz .

Or with wget, all files:
    wget --timestamping 
        'ftp://hgdownload.cse.ucsc.edu/goldenPath/ponAbe2/database/*'
With wget, a single file: 
    wget --timestamping 
        'ftp://hgdownload.cse.ucsc.edu/goldenPath/ponAbe2/database/gc5BaseBw.txt.gz' 
        -O gc5BaseBw.txt.gz

Please note that some files contents, such as this example gc5BaseBw.txt.gz,
will point to the data being hosted in another /gbdb/ location, which
refers to ftp://hgdownload.cse.ucsc.edu/gbdb/

To uncompress the *.txt.gz files:
    gunzip <table>.txt.gz
The tables can be loaded directly from the .txt.gz compressed file.
It is not necessary to uncompress them to load into a database,
as shown in the example below.

To load one of the tables directly into your local mirror database,
for example the table chromInfo:
## create table from the sql definition
$ hgsql ponAbe2 < chromInfo.sql
## load data from the txt.gz file
$ zcat chromInfo.txt.gz | hgsql ponAbe2 --local-infile=1 
        -e 'LOAD DATA LOCAL INFILE "/dev/stdin" INTO TABLE chromInfo;'

------------------------------------------------------------------
The Orangutan sequence is made freely available to the community by the
Genome Sequencing Center, Washington University School of Medicine, with
the following understanding:

1. The data may be freely downloaded, used in analyses, and repackaged in
   databases.

2. Users are free to use the data in scientific papers analyzing these data
   if the providers of these data are properly acknowledged.  See
   http://genome.ucsc.edu/goldenPath/credits.html for credit information.

3. The centers producing the data reserve the right to publish the initial
   large-scale analyses of the data set, including large-scale identification
   of regions of evolutionary conservation and large-scale genomic assembly.
   Large-scale refers to regions with size on the order of a chromosome (that
   is, 30 Mb or more).

4. Any redistribution of the data should carry this notice.

All the files and tables in this directory are freely usable for any purpose.

      Name                                              Last modified      Size  Description
Parent Directory - bigFiles.txt.gz 2024-12-08 03:15 33 chrM_gap.txt.gz 2008-03-11 13:16 33 chr5_h2_hap1_est.txt.gz 2011-04-18 09:03 41 chr5_h2_hap1_mrna.txt.gz 2011-04-18 09:06 42 chr18_random_mrna.txt.gz 2011-04-18 09:06 42 chr5_h2_hap1_intronEst.txt.gz 2011-04-18 09:06 47 chr6_cox_hap1_random_est.txt.gz 2011-04-18 09:06 49 chr6_cox_hap1_random_mrna.txt.gz 2011-04-18 09:06 50 chr6_cox_hap1_random_intronEst.txt.gz 2011-04-18 09:06 55 chrM_gold.txt.gz 2008-03-11 13:16 70 chrM_intronEst.txt.gz 2011-04-18 09:06 112 chrX_random_mrna.txt.gz 2011-04-18 09:06 176 chr6_qbl_hap2_random_intronEst.txt.gz 2011-04-18 09:06 193 grp.txt.gz 2014-03-02 04:14 208 chr21_random_mrna.txt.gz 2011-04-18 09:06 215 chr6_qbl_hap2_random_est.txt.gz 2011-04-18 08:56 222 chr5_h2_hap1_gap.txt.gz 2008-03-11 12:50 240 chrM_rmsk.txt.gz 2008-03-11 13:16 259 chr5_h2_hap1_chainMm9.txt.gz 2008-03-11 12:50 272 chr5_h2_hap1_gold.txt.gz 2008-03-11 12:50 289 chr5_h2_hap1_chainOrnAna1.txt.gz 2008-03-11 12:50 302 chrX_random_intronEst.txt.gz 2011-04-18 09:03 309 chromAlias.txt.gz 2018-08-05 09:00 311 chr20_random_mrna.txt.gz 2011-04-18 08:56 316 chr14_random_mrna.txt.gz 2011-04-18 09:06 368 chrM_mrna.txt.gz 2011-04-18 08:56 391 chr5_random_mrna.txt.gz 2011-04-18 09:06 398 chr6_qbl_hap2_random_gap.txt.gz 2008-03-11 12:54 437 chr12_random_mrna.txt.gz 2017-07-09 12:34 486 cytoBandIdeo.txt.gz 2013-04-28 20:57 490 chromInfo.txt.gz 2008-03-11 13:26 519 chr5_random_intronEst.txt.gz 2011-04-18 08:56 556 chr6_cox_hap1_random_gap.txt.gz 2008-03-11 12:54 603 chr6_qbl_hap2_random_gold.txt.gz 2008-03-11 12:54 604 chr11_random_mrna.txt.gz 2011-04-18 09:03 605 chr21_random_intronEst.txt.gz 2011-04-18 09:06 616 chr12_random_intronEst.txt.gz 2011-04-18 09:04 640 chr6_qbl_hap2_random_mrna.txt.gz 2019-10-20 11:20 656 chr7_random_mrna.txt.gz 2012-02-05 18:21 701 chr8_random_mrna.txt.gz 2011-04-18 08:56 701 chr22_random_mrna.txt.gz 2011-04-18 08:56 779 chr6_qbl_hap2_mrna.txt.gz 2019-10-20 11:20 806 chr3_random_mrna.txt.gz 2012-02-05 18:18 811 chr5_h2_hap1_chainOrnAna1Link.txt.gz 2008-03-11 12:50 815 chr14_random_intronEst.txt.gz 2011-04-18 08:56 828 chr6_cox_hap1_random_gold.txt.gz 2008-03-11 12:54 835 chr6_random_intronEst.txt.gz 2011-04-18 09:06 835 chr13_random_mrna.txt.gz 2011-04-18 09:06 848 chr4_random_mrna.txt.gz 2011-04-18 08:56 851 hgFindSpec.txt.gz 2023-03-28 13:52 868 chr20_random_intronEst.txt.gz 2011-04-18 08:56 887 chr15_random_mrna.txt.gz 2011-04-18 08:56 927 chrX_random_est.txt.gz 2011-04-18 08:56 1.0K chr6_qbl_hap2_intronEst.txt.gz 2011-04-18 08:56 1.0K chr6_cox_hap1_intronEst.txt.gz 2011-04-18 08:56 1.0K chr9_random_mrna.txt.gz 2017-07-09 12:38 1.1K chr11_random_intronEst.txt.gz 2011-04-18 09:06 1.1K chr6_random_mrna.txt.gz 2019-10-20 11:20 1.1K nscanPep.sql 2008-03-22 03:16 1.1K genscanPep.sql 2008-03-11 13:27 1.2K chr21_random_est.txt.gz 2011-04-18 08:56 1.2K chr19_random_mrna.txt.gz 2012-02-05 18:18 1.2K chr13_random_intronEst.txt.gz 2011-04-18 08:56 1.2K chromInfo.sql 2008-03-11 13:26 1.2K chr2b_random_mrna.txt.gz 2017-07-09 12:38 1.2K chr6_qbl_hap2_est.txt.gz 2011-04-18 08:58 1.3K chr18_random_intronEst.txt.gz 2011-04-18 08:56 1.3K extFile.sql 2008-03-11 11:29 1.3K chr2a_random_mrna.txt.gz 2011-04-18 08:56 1.3K chr2b_random_intronEst.txt.gz 2011-04-18 09:04 1.3K ensPep.sql 2021-05-25 14:45 1.3K ensemblSource.sql 2021-05-25 14:45 1.4K grp.sql 2014-03-02 04:14 1.4K chr10_random_mrna.txt.gz 2012-02-05 18:18 1.4K bigFiles.sql 2024-12-08 03:15 1.4K ensemblToGeneName.sql 2021-05-25 14:44 1.4K chr1_chainMm9Link.sql 2008-03-11 12:19 1.4K chr3_chainMm9Link.sql 2008-03-11 12:37 1.4K chr4_chainMm9Link.sql 2008-03-11 12:42 1.4K chr5_chainMm9Link.sql 2008-03-11 12:46 1.4K chr6_chainMm9Link.sql 2008-03-11 12:51 1.4K chr7_chainMm9Link.sql 2008-03-11 12:58 1.4K chr8_chainMm9Link.sql 2008-03-11 13:07 1.4K chr9_chainMm9Link.sql 2008-03-11 13:11 1.4K chrM_chainMm9Link.sql 2008-03-11 13:16 1.4K chrX_chainMm9Link.sql 2008-03-11 13:22 1.4K chr2a_chainMm9Link.sql 2008-03-11 12:31 1.4K chr2b_chainMm9Link.sql 2008-03-11 12:34 1.4K chr10_chainMm9Link.sql 2008-03-11 11:17 1.4K chr11_chainMm9Link.sql 2008-03-11 11:22 1.4K chr12_chainMm9Link.sql 2008-03-11 11:27 1.4K chr13_chainMm9Link.sql 2008-03-11 11:31 1.4K chr14_chainMm9Link.sql 2008-03-11 11:32 1.4K chr15_chainMm9Link.sql 2008-03-11 11:35 1.4K chr16_chainMm9Link.sql 2008-03-11 11:37 1.4K chr17_chainMm9Link.sql 2008-03-11 11:42 1.4K chr18_chainMm9Link.sql 2008-03-11 11:45 1.4K chr19_chainMm9Link.sql 2008-03-11 11:52 1.4K chr20_chainMm9Link.sql 2008-03-11 12:27 1.4K chr21_chainMm9Link.sql 2008-03-11 12:29 1.4K chr22_chainMm9Link.sql 2008-03-11 12:29 1.4K chrUn_chainMm9Link.sql 2008-03-11 13:17 1.4K multiz8way.sql 2008-03-11 13:27 1.4K chr1_chainOrnAna1Link.sql 2008-03-11 12:22 1.4K chr3_chainOrnAna1Link.sql 2008-03-11 12:38 1.4K chr4_chainOrnAna1Link.sql 2008-03-11 12:43 1.4K chr5_chainOrnAna1Link.sql 2008-03-11 12:48 1.4K chr6_chainOrnAna1Link.sql 2008-03-11 12:52 1.4K chr7_chainOrnAna1Link.sql 2008-03-11 13:01 1.4K chr8_chainOrnAna1Link.sql 2008-03-11 13:08 1.4K chr9_chainOrnAna1Link.sql 2008-03-11 13:12 1.4K chrM_chainOrnAna1Link.sql 2008-03-11 13:16 1.4K chrX_chainOrnAna1Link.sql 2008-03-11 13:24 1.4K chromAlias.sql 2018-08-05 09:00 1.4K chr2a_chainOrnAna1Link.sql 2008-03-11 12:32 1.4K chr2b_chainOrnAna1Link.sql 2008-03-11 12:34 1.4K chr10_chainOrnAna1Link.sql 2008-03-11 11:18 1.4K chr11_chainOrnAna1Link.sql 2008-03-11 11:24 1.4K chr12_chainOrnAna1Link.sql 2008-03-11 11:28 1.4K chr13_chainOrnAna1Link.sql 2008-03-11 11:31 1.4K chr14_chainOrnAna1Link.sql 2008-03-11 11:33 1.4K chr15_chainOrnAna1Link.sql 2008-03-11 11:35 1.4K chr16_chainOrnAna1Link.sql 2008-03-11 11:39 1.4K chr17_chainOrnAna1Link.sql 2008-03-11 11:43 1.4K chr18_chainOrnAna1Link.sql 2008-03-11 11:46 1.4K chr19_chainOrnAna1Link.sql 2008-03-11 12:06 1.4K chr20_chainOrnAna1Link.sql 2008-03-11 12:28 1.4K chr21_chainOrnAna1Link.sql 2008-03-11 12:29 1.4K chr22_chainOrnAna1Link.sql 2008-03-11 12:30 1.4K chrUn_chainOrnAna1Link.sql 2008-03-11 13:19 1.4K history.sql 2008-03-11 12:29 1.4K chr1_random_chainMm9Link.sql 2008-03-11 12:25 1.4K chr3_random_chainMm9Link.sql 2008-03-11 12:41 1.4K chr4_random_chainMm9Link.sql 2008-03-11 12:45 1.4K chr5_random_chainMm9Link.sql 2008-03-11 12:50 1.4K chr6_random_chainMm9Link.sql 2008-03-11 12:57 1.4K chr7_random_chainMm9Link.sql 2008-03-11 13:04 1.4K chr8_random_chainMm9Link.sql 2008-03-11 13:10 1.4K chr9_random_chainMm9Link.sql 2008-03-11 13:14 1.4K chrX_random_chainMm9Link.sql 2008-03-11 13:25 1.4K phastConsElements8way.sql 2008-03-11 13:39 1.4K chr2a_random_chainMm9Link.sql 2008-03-11 12:33 1.4K chr2b_random_chainMm9Link.sql 2008-03-11 12:35 1.4K chr5_h2_hap1_chainMm9Link.sql 2008-03-11 12:50 1.4K chr10_random_chainMm9Link.sql 2008-03-11 11:20 1.4K chr11_random_chainMm9Link.sql 2008-03-11 11:25 1.4K chr12_random_chainMm9Link.sql 2008-03-11 11:29 1.4K chr13_random_chainMm9Link.sql 2008-03-11 11:32 1.4K chr14_random_chainMm9Link.sql 2008-03-11 11:34 1.4K chr15_random_chainMm9Link.sql 2008-03-11 11:36 1.4K chr16_random_chainMm9Link.sql 2008-03-11 11:40 1.4K chr17_random_chainMm9Link.sql 2008-03-11 11:44 1.4K chr18_random_chainMm9Link.sql 2008-03-11 11:47 1.4K chr19_random_chainMm9Link.sql 2008-03-11 12:14 1.4K chr20_random_chainMm9Link.sql 2008-03-11 12:28 1.4K chr21_random_chainMm9Link.sql 2008-03-11 12:29 1.4K chr22_random_chainMm9Link.sql 2008-03-11 12:30 1.4K chr6_cox_hap1_chainMm9Link.sql 2008-03-11 12:54 1.4K chr6_qbl_hap2_chainMm9Link.sql 2008-03-11 12:54 1.4K chrM_gap.sql 2008-03-11 13:16 1.4K ensGtp.sql 2021-05-25 14:44 1.4K chr1_random_chainOrnAna1Link.sql 2008-03-11 12:25 1.4K chr3_random_chainOrnAna1Link.sql 2008-03-11 12:41 1.4K chr4_random_chainOrnAna1Link.sql 2008-03-11 12:45 1.4K chr5_random_chainOrnAna1Link.sql 2008-03-11 12:50 1.4K chr6_random_chainOrnAna1Link.sql 2008-03-11 12:57 1.4K chr7_random_chainOrnAna1Link.sql 2008-03-11 13:05 1.4K chr8_random_chainOrnAna1Link.sql 2008-03-11 13:10 1.4K chr9_random_chainOrnAna1Link.sql 2008-03-11 13:15 1.4K chrX_random_chainOrnAna1Link.sql 2008-03-11 13:25 1.4K chr2a_random_chainOrnAna1Link.sql 2008-03-11 12:33 1.4K chr2b_random_chainOrnAna1Link.sql 2008-03-11 12:35 1.4K chr5_h2_hap1_chainOrnAna1Link.sql 2008-03-11 12:50 1.4K chr8_random_intronEst.txt.gz 2011-04-18 08:56 1.4K chr10_random_chainOrnAna1Link.sql 2008-03-11 11:20 1.4K chr11_random_chainOrnAna1Link.sql 2008-03-11 11:26 1.4K chr12_random_chainOrnAna1Link.sql 2008-03-11 11:29 1.4K chr13_random_chainOrnAna1Link.sql 2008-03-11 11:32 1.4K chr14_random_chainOrnAna1Link.sql 2008-03-11 11:34 1.4K chr15_random_chainOrnAna1Link.sql 2008-03-11 11:36 1.4K chr16_random_chainOrnAna1Link.sql 2008-03-11 11:41 1.4K chr17_random_chainOrnAna1Link.sql 2008-03-11 11:44 1.4K chr18_random_chainOrnAna1Link.sql 2008-03-11 11:47 1.4K chr19_random_chainOrnAna1Link.sql 2008-03-11 12:16 1.4K chr20_random_chainOrnAna1Link.sql 2008-03-11 12:28 1.4K chr21_random_chainOrnAna1Link.sql 2008-03-11 12:29 1.4K chr22_random_chainOrnAna1Link.sql 2008-03-11 12:30 1.4K chr6_cox_hap1_chainOrnAna1Link.sql 2008-03-11 12:54 1.5K chr6_qbl_hap2_chainOrnAna1Link.sql 2008-03-11 12:54 1.5K tableDescriptions.sql 2024-12-07 02:03 1.5K multiz8waySummary.sql 2008-03-11 13:31 1.5K chr6_cox_hap1_random_chainMm9Link.sql 2008-03-11 12:54 1.5K chr6_qbl_hap2_random_chainMm9Link.sql 2008-03-11 12:54 1.5K chainMm10Link.sql 2012-05-09 08:11 1.5K chr6_cox_hap1_random_chainOrnAna1Link.sql 2008-03-11 12:54 1.5K chr6_qbl_hap2_random_chainOrnAna1Link.sql 2008-03-11 12:54 1.5K chr22_random_intronEst.txt.gz 2011-04-18 09:03 1.5K chainCalJac3Link.sql 2010-06-06 20:00 1.5K chainGorGor3Link.sql 2011-11-27 14:11 1.5K chainMonDom5Link.sql 2009-10-04 12:20 1.5K chainPanTro3Link.sql 2011-05-03 16:22 1.5K extFile.txt.gz 2008-03-11 11:29 1.5K microsat.sql 2015-08-24 00:28 1.5K chrM_gold.sql 2008-03-11 13:16 1.5K chr1_gap.sql 2008-03-11 12:24 1.5K chr3_gap.sql 2008-03-11 12:40 1.5K chr4_gap.sql 2008-03-11 12:44 1.5K chr5_gap.sql 2008-03-11 12:50 1.5K chr6_gap.sql 2008-03-11 12:54 1.5K chr7_gap.sql 2008-03-11 13:03 1.5K chr8_gap.sql 2008-03-11 13:09 1.5K chr9_gap.sql 2008-03-11 13:14 1.5K chrX_gap.sql 2008-03-11 13:25 1.5K chr2a_gap.sql 2008-03-11 12:33 1.5K chr2b_gap.sql 2008-03-11 12:35 1.5K chr10_gap.sql 2008-03-11 11:20 1.5K chr11_gap.sql 2008-03-11 11:25 1.5K chr12_gap.sql 2008-03-11 11:29 1.5K chr13_gap.sql 2008-03-11 11:31 1.5K chr14_gap.sql 2008-03-11 11:34 1.5K chr15_gap.sql 2008-03-11 11:36 1.5K chr16_gap.sql 2008-03-11 11:40 1.5K chr17_gap.sql 2008-03-11 11:44 1.5K chr18_gap.sql 2008-03-11 11:47 1.5K chr19_gap.sql 2008-03-11 12:13 1.5K chr20_gap.sql 2008-03-11 12:28 1.5K chr21_gap.sql 2008-03-11 12:29 1.5K chr22_gap.sql 2008-03-11 12:30 1.5K chrUn_gap.sql 2008-03-11 13:21 1.5K chr1_random_gap.sql 2008-03-11 12:27 1.5K chr3_random_gap.sql 2008-03-11 12:41 1.5K chr4_random_gap.sql 2008-03-11 12:45 1.5K chr5_random_gap.sql 2008-03-11 12:50 1.5K chr6_random_gap.sql 2008-03-11 12:57 1.5K chr7_random_gap.sql 2008-03-11 13:06 1.5K chr8_random_gap.sql 2008-03-11 13:10 1.5K chr9_random_gap.sql 2008-03-11 13:15 1.5K chrX_random_gap.sql 2008-03-11 13:26 1.5K chr2a_random_gap.sql 2008-03-11 12:33 1.5K chr2b_random_gap.sql 2008-03-11 12:36 1.5K chr5_h2_hap1_gap.sql 2008-03-11 12:50 1.5K chr10_random_gap.sql 2008-03-11 11:21 1.5K chr11_random_gap.sql 2008-03-11 11:26 1.5K chr12_random_gap.sql 2008-03-11 11:30 1.5K chr13_random_gap.sql 2008-03-11 11:32 1.5K chr14_random_gap.sql 2008-03-11 11:34 1.5K chr15_random_gap.sql 2008-03-11 11:37 1.5K chr16_random_gap.sql 2008-03-11 11:41 1.5K chr17_random_gap.sql 2008-03-11 11:45 1.5K chr18_random_gap.sql 2008-03-11 11:47 1.5K chr19_random_gap.sql 2008-03-11 12:18 1.5K chr20_random_gap.sql 2008-03-11 12:28 1.5K chr21_random_gap.sql 2008-03-11 12:29 1.5K chr22_random_gap.sql 2008-03-11 12:30 1.5K cytoBandIdeo.sql 2013-04-28 20:57 1.5K chr6_cox_hap1_gap.sql 2008-03-11 12:54 1.5K chr6_qbl_hap2_gap.sql 2008-03-11 12:54 1.5K chr6_qbl_hap2_gap.txt.gz 2008-03-11 12:54 1.5K chainHg19Link.sql 2009-07-26 10:11 1.5K chainHg38Link.sql 2017-01-30 13:01 1.5K chr6_cox_hap1_random_gap.sql 2008-03-11 12:54 1.5K chr6_qbl_hap2_random_gap.sql 2008-03-11 12:54 1.5K chainTarSyr2Link.sql 2015-05-25 08:43 1.5K chainRheMac3Link.sql 2012-12-02 20:28 1.6K chr6_cox_hap1_est.txt.gz 2011-04-18 09:03 1.6K chr1_gold.sql 2008-03-11 12:24 1.6K chr3_gold.sql 2008-03-11 12:40 1.6K chr4_gold.sql 2008-03-11 12:44 1.6K chr5_gold.sql 2008-03-11 12:50 1.6K chr6_gold.sql 2008-03-11 12:54 1.6K chr7_gold.sql 2008-03-11 13:03 1.6K chr8_gold.sql 2008-03-11 13:09 1.6K chr9_gold.sql 2008-03-11 13:14 1.6K chrX_gold.sql 2008-03-11 13:25 1.6K chr2a_gold.sql 2008-03-11 12:33 1.6K chr2b_gold.sql 2008-03-11 12:35 1.6K chr10_gold.sql 2008-03-11 11:20 1.6K chr11_gold.sql 2008-03-11 11:25 1.6K chr12_gold.sql 2008-03-11 11:29 1.6K chr13_gold.sql 2008-03-11 11:31 1.6K chr14_gold.sql 2008-03-11 11:34 1.6K chr15_gold.sql 2008-03-11 11:36 1.6K chr16_gold.sql 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chr15_random_chainOrnAna1.txt.gz 2008-03-11 11:36 257K chr4_gap.txt.gz 2008-03-11 12:44 258K chr20_random_rmsk.txt.gz 2008-03-11 12:28 267K chr18_random_chainOrnAna1Link.txt.gz 2008-03-11 11:47 270K chr11_random_rmsk.txt.gz 2008-03-11 11:26 282K chr6_gold.txt.gz 2008-03-11 12:54 283K chr10_random_chainOrnAna1.txt.gz 2008-03-11 11:20 284K chr7_gold.txt.gz 2008-03-11 13:03 284K chr21_chainOrnAna1.txt.gz 2008-03-11 12:29 285K chr18_random_rmsk.txt.gz 2008-03-11 11:47 285K chr2a_random_chainOrnAna1Link.txt.gz 2008-03-11 12:33 291K chr22_random_chainOrnAna1Link.txt.gz 2008-03-11 12:30 291K chr6_qbl_hap2_chainMm9Link.txt.gz 2008-03-11 12:54 300K chr6_random_chainOrnAna1Link.txt.gz 2008-03-11 12:57 304K chr21_random_chainMm9Link.txt.gz 2008-03-11 12:29 305K chr5_gold.txt.gz 2008-03-11 12:50 305K microsat.txt.gz 2015-08-24 00:28 308K chr22_chainOrnAna1.txt.gz 2008-03-11 12:30 310K chr1_gap.txt.gz 2008-03-11 12:24 312K chr14_random_rmsk.txt.gz 2008-03-11 11:34 315K chr21_chainMm9.txt.gz 2008-03-11 12:29 316K chr8_random_chainMm9.txt.gz 2008-03-11 13:10 320K chrUn_gold.txt.gz 2008-03-11 13:21 323K chr14_random_chainMm9.txt.gz 2008-03-11 11:34 324K chr3_gold.txt.gz 2008-03-11 12:40 328K chr17_random_chainMm9.txt.gz 2008-03-11 11:44 334K chr13_chainOrnAna1.txt.gz 2008-03-11 11:31 340K chr11_random_chainMm9.txt.gz 2008-03-11 11:25 343K chr22_random_chainMm9Link.txt.gz 2008-03-11 12:30 349K chr4_gold.txt.gz 2008-03-11 12:44 352K chr12_random_chainMm9.txt.gz 2008-03-11 11:29 360K chr15_random_chainMm9.txt.gz 2008-03-11 11:36 361K chr3_random_chainOrnAna1.txt.gz 2008-03-11 12:41 375K chr20_random_chainMm9Link.txt.gz 2008-03-11 12:28 395K refFlat.txt.gz 2020-08-22 23:30 397K chr15_chainOrnAna1.txt.gz 2008-03-11 11:35 399K chr22_chainMm9.txt.gz 2008-03-11 12:29 401K chr1_gold.txt.gz 2008-03-11 12:24 416K chr19_random_rmsk.txt.gz 2008-03-11 12:18 426K refGene.txt.gz 2020-08-22 23:30 428K chr13_random_rmsk.txt.gz 2008-03-11 11:32 430K chr9_random_chainOrnAna1.txt.gz 2008-03-11 13:15 443K chr16_random_chainOrnAna1.txt.gz 2008-03-11 11:41 456K chr10_random_chainMm9.txt.gz 2008-03-11 11:20 468K refSeqAli.txt.gz 2020-08-22 23:36 470K chr20_chainOrnAna1.txt.gz 2008-03-11 12:28 474K chr7_random_chainOrnAna1.txt.gz 2008-03-11 13:05 488K chr18_chainOrnAna1.txt.gz 2008-03-11 11:46 512K chr16_random_chainMm9.txt.gz 2008-03-11 11:40 514K chr15_random_rmsk.txt.gz 2008-03-11 11:37 518K chrX_random_chainMm9Link.txt.gz 2008-03-11 13:25 518K chr12_random_rmsk.txt.gz 2008-03-11 11:30 526K chr5_random_chainOrnAna1Link.txt.gz 2008-03-11 12:50 528K chr2a_chainOrnAna1.txt.gz 2008-03-11 12:32 535K chr13_chainMm9.txt.gz 2008-03-11 11:31 539K chr7_random_chainMm9.txt.gz 2008-03-11 13:04 549K chr2b_random_chainOrnAna1Link.txt.gz 2008-03-11 12:35 560K chr6_random_rmsk.txt.gz 2008-03-11 12:57 571K chr4_random_chainOrnAna1Link.txt.gz 2008-03-11 12:45 571K chr3_random_chainMm9.txt.gz 2008-03-11 12:40 589K estOrientInfo.txt.gz 2011-04-18 08:55 590K chr2a_random_rmsk.txt.gz 2008-03-11 12:33 601K all_mrna.txt.gz 2019-10-20 11:19 605K chr2b_random_rmsk.txt.gz 2008-03-11 12:36 607K chr9_random_rmsk.txt.gz 2008-03-11 13:15 617K chrX_random_rmsk.txt.gz 2008-03-11 13:26 632K chr9_random_chainMm9.txt.gz 2008-03-11 13:14 647K chr16_random_rmsk.txt.gz 2008-03-11 11:41 667K chr8_random_rmsk.txt.gz 2008-03-11 13:10 669K chr2b_chainOrnAna1.txt.gz 2008-03-11 12:34 695K chr18_random_chainMm9Link.txt.gz 2008-03-11 11:47 715K chr20_chainMm9.txt.gz 2008-03-11 12:27 728K chr5_random_rmsk.txt.gz 2008-03-11 12:50 751K chr18_chainMm9.txt.gz 2008-03-11 11:45 766K chr13_random_chainMm9Link.txt.gz 2008-03-11 11:32 773K chr8_random_chainOrnAna1Link.txt.gz 2008-03-11 13:10 787K chr12_random_chainOrnAna1Link.txt.gz 2008-03-11 11:29 810K chr4_chainOrnAna1.txt.gz 2008-03-11 12:43 813K chr1_random_chainOrnAna1.txt.gz 2008-03-11 12:25 850K chr14_chainOrnAna1.txt.gz 2008-03-11 11:33 858K chr7_random_rmsk.txt.gz 2008-03-11 13:06 860K chr15_chainMm9.txt.gz 2008-03-11 11:35 860K chr3_random_rmsk.txt.gz 2008-03-11 12:41 904K chr17_random_rmsk.txt.gz 2008-03-11 11:45 908K chr2b_chainMm9.txt.gz 2008-03-11 12:34 938K chr14_random_chainOrnAna1Link.txt.gz 2008-03-11 11:34 1.0M chr4_random_rmsk.txt.gz 2008-03-11 12:45 1.0M chr10_random_chainOrnAna1Link.txt.gz 2008-03-11 11:20 1.0M chr12_chainOrnAna1.txt.gz 2008-03-11 11:28 1.0M chrX_chainOrnAna1.txt.gz 2008-03-11 13:24 1.0M chr10_chainOrnAna1.txt.gz 2008-03-11 11:18 1.0M chr11_random_chainOrnAna1Link.txt.gz 2008-03-11 11:26 1.0M chr15_random_chainOrnAna1Link.txt.gz 2008-03-11 11:36 1.1M chr2a_chainMm9.txt.gz 2008-03-11 12:31 1.1M chr17_random_chainOrnAna1Link.txt.gz 2008-03-11 11:44 1.1M chr17_chainOrnAna1.txt.gz 2008-03-11 11:43 1.1M chr9_chainOrnAna1.txt.gz 2008-03-11 13:12 1.2M chr5_chainOrnAna1.txt.gz 2008-03-11 12:48 1.2M chr8_chainOrnAna1.txt.gz 2008-03-11 13:08 1.2M chr16_chainOrnAna1.txt.gz 2008-03-11 11:39 1.2M chr3_chainOrnAna1.txt.gz 2008-03-11 12:38 1.2M chr1_random_chainMm9.txt.gz 2008-03-11 12:25 1.3M chr6_random_chainMm9Link.txt.gz 2008-03-11 12:57 1.3M chr2b_random_chainMm9Link.txt.gz 2008-03-11 12:35 1.3M chr6_chainOrnAna1.txt.gz 2008-03-11 12:52 1.4M chr16_chainMm9.txt.gz 2008-03-11 11:37 1.4M chr1_random_rmsk.txt.gz 2008-03-11 12:27 1.5M chr4_chainMm9.txt.gz 2008-03-11 12:42 1.5M chr21_rmsk.txt.gz 2008-03-11 12:29 1.5M chr2a_random_chainMm9Link.txt.gz 2008-03-11 12:33 1.5M chr9_random_chainOrnAna1Link.txt.gz 2008-03-11 13:15 1.5M chr3_random_chainOrnAna1Link.txt.gz 2008-03-11 12:41 1.5M chr10_chainMm9.txt.gz 2008-03-11 11:17 1.6M chr14_chainMm9.txt.gz 2008-03-11 11:32 1.6M chr5_random_chainMm9Link.txt.gz 2008-03-11 12:50 1.6M chr21_chainOrnAna1Link.txt.gz 2008-03-11 12:29 1.6M chr22_rmsk.txt.gz 2008-03-11 12:30 1.7M chrX_chainMm9.txt.gz 2008-03-11 13:22 1.7M chr8_chainMm9.txt.gz 2008-03-11 13:07 1.7M chr8_random_chainMm9Link.txt.gz 2008-03-11 13:10 1.8M chr16_random_chainOrnAna1Link.txt.gz 2008-03-11 11:41 1.8M chr19_random_chainMm9.txt.gz 2008-03-11 12:14 1.8M chrUn_chainOrnAna1.txt.gz 2008-03-11 13:19 1.8M chr19_random_chainOrnAna1.txt.gz 2008-03-11 12:16 1.8M chr14_random_chainMm9Link.txt.gz 2008-03-11 11:34 1.8M chr17_chainMm9.txt.gz 2008-03-11 11:42 1.9M chr4_random_chainMm9Link.txt.gz 2008-03-11 12:45 1.9M chr11_random_chainMm9Link.txt.gz 2008-03-11 11:26 1.9M chr7_random_chainOrnAna1Link.txt.gz 2008-03-11 13:05 1.9M chr22_chainOrnAna1Link.txt.gz 2008-03-11 12:30 1.9M chrUn_chainMm9.txt.gz 2008-03-11 13:17 2.0M chr12_chainMm9.txt.gz 2008-03-11 11:27 2.0M chr5_chainMm9.txt.gz 2008-03-11 12:46 2.0M chr9_chainMm9.txt.gz 2008-03-11 13:11 2.0M chr10_random_rmsk.txt.gz 2008-03-11 11:21 2.1M chr3_chainMm9.txt.gz 2008-03-11 12:37 2.1M all_est.txt.gz 2011-04-18 08:56 2.1M chrUn_rmsk.txt.gz 2008-03-11 13:22 2.2M chr6_chainMm9.txt.gz 2008-03-11 12:51 2.2M nscanGene.txt.gz 2008-03-22 03:16 2.2M chr7_chainOrnAna1.txt.gz 2008-03-11 13:01 2.2M chr12_random_chainMm9Link.txt.gz 2008-03-11 11:29 2.2M geneid.txt.gz 2015-11-22 20:48 2.2M chr1_chainOrnAna1.txt.gz 2008-03-11 12:22 2.2M chr15_random_chainMm9Link.txt.gz 2008-03-11 11:36 2.3M augustusGene.txt.gz 2015-07-26 17:21 2.3M ensGene.txt.gz 2021-05-25 14:44 2.3M chr17_random_chainMm9Link.txt.gz 2008-03-11 11:44 2.3M chr10_random_chainMm9Link.txt.gz 2008-03-11 11:20 2.4M chr16_random_chainMm9Link.txt.gz 2008-03-11 11:40 2.4M chr11_chainOrnAna1.txt.gz 2008-03-11 11:24 2.4M chr15_chainOrnAna1Link.txt.gz 2008-03-11 11:35 2.7M chr20_chainOrnAna1Link.txt.gz 2008-03-11 12:28 2.8M chr7_chainMm9.txt.gz 2008-03-11 12:58 2.9M genscan.txt.gz 2008-03-11 12:16 2.9M chr18_chainOrnAna1Link.txt.gz 2008-03-11 11:46 2.9M chr13_chainOrnAna1Link.txt.gz 2008-03-11 11:31 3.0M chr7_random_chainMm9Link.txt.gz 2008-03-11 13:04 3.0M chr19_rmsk.txt.gz 2008-03-11 12:18 3.0M chr9_random_chainMm9Link.txt.gz 2008-03-11 13:14 3.1M chr20_rmsk.txt.gz 2008-03-11 12:29 3.1M chr18_rmsk.txt.gz 2008-03-11 11:47 3.2M chr2a_chainOrnAna1Link.txt.gz 2008-03-11 12:32 3.5M chr17_rmsk.txt.gz 2008-03-11 11:45 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chr11_rmsk.txt.gz 2008-03-11 11:26 6.0M nscanPep.txt.gz 2008-03-22 03:17 6.0M ensPep.txt.gz 2021-05-25 14:45 6.0M chr14_chainOrnAna1Link.txt.gz 2008-03-11 11:33 6.1M chr16_chainOrnAna1Link.txt.gz 2008-03-11 11:39 6.1M chr8_chainOrnAna1Link.txt.gz 2008-03-11 13:08 6.2M chr19_random_chainMm9Link.txt.gz 2008-03-11 12:14 6.2M chr12_rmsk.txt.gz 2008-03-11 11:30 6.3M chr8_rmsk.txt.gz 2008-03-11 13:10 6.5M chr7_rmsk.txt.gz 2008-03-11 13:06 6.7M chrX_rmsk.txt.gz 2008-03-11 13:26 6.8M chr9_chainOrnAna1Link.txt.gz 2008-03-11 13:12 6.9M chr5_chainOrnAna1Link.txt.gz 2008-03-11 12:48 7.0M chr6_rmsk.txt.gz 2008-03-11 12:57 7.3M chrUn_chainOrnAna1Link.txt.gz 2008-03-11 13:19 7.4M chr1_random_chainMm9Link.txt.gz 2008-03-11 12:25 7.6M chr3_chainOrnAna1Link.txt.gz 2008-03-11 12:39 7.7M chr5_rmsk.txt.gz 2008-03-11 12:50 7.7M chr6_chainOrnAna1Link.txt.gz 2008-03-11 12:52 7.8M chr20_chainMm9Link.txt.gz 2008-03-11 12:27 8.2M chr4_rmsk.txt.gz 2008-03-11 12:45 8.3M chr3_rmsk.txt.gz 2008-03-11 12:41 8.8M chr18_chainMm9Link.txt.gz 2008-03-11 11:45 9.2M chrUn_chainMm9Link.txt.gz 2008-03-11 13:17 9.6M genscanPep.txt.gz 2008-03-11 13:27 9.7M chr19_chainOrnAna1.txt.gz 2008-03-11 12:05 9.8M chr7_chainOrnAna1Link.txt.gz 2008-03-11 13:01 10M chr13_chainMm9Link.txt.gz 2008-03-11 11:31 10M chr1_rmsk.txt.gz 2008-03-11 12:27 11M phastConsElements8way.txt.gz 2008-03-11 13:39 11M chr19_chainMm9.txt.gz 2008-03-11 11:52 11M chr16_chainMm9Link.txt.gz 2008-03-11 11:38 11M chr15_chainMm9Link.txt.gz 2008-03-11 11:35 11M chr17_chainMm9Link.txt.gz 2008-03-11 11:42 13M chr1_chainOrnAna1Link.txt.gz 2008-03-11 12:22 14M gc5Base.txt.gz 2008-03-11 11:47 14M chr2a_chainMm9Link.txt.gz 2008-03-11 12:31 14M chr11_chainOrnAna1Link.txt.gz 2008-03-11 11:24 15M chr14_chainMm9Link.txt.gz 2008-03-11 11:32 16M chr2b_chainMm9Link.txt.gz 2008-03-11 12:34 17M multiz8wayFrames.txt.gz 2010-09-05 16:44 17M chrX_chainMm9Link.txt.gz 2008-03-11 13:23 17M chainCalJac3.txt.gz 2010-06-06 19:59 18M multiz8waySummary.txt.gz 2008-03-11 13:31 18M chr10_chainMm9Link.txt.gz 2008-03-11 11:17 18M chr8_chainMm9Link.txt.gz 2008-03-11 13:07 18M netOrnAna1.txt.gz 2008-03-11 13:34 19M chr9_chainMm9Link.txt.gz 2008-03-11 13:11 19M nestedRepeats.txt.gz 2008-03-11 13:31 20M chr12_chainMm9Link.txt.gz 2008-03-11 11:27 20M netHg38.txt.gz 2017-01-30 13:09 21M netHg19.txt.gz 2009-07-26 10:11 21M chr4_chainMm9Link.txt.gz 2008-03-11 12:42 22M netPanTro3.txt.gz 2011-05-03 16:20 23M chainGorGor3.txt.gz 2011-11-27 14:11 24M chr5_chainMm9Link.txt.gz 2008-03-11 12:46 24M chr7_chainMm9Link.txt.gz 2008-03-11 12:59 24M chr6_chainMm9Link.txt.gz 2008-03-11 12:51 25M chainHg19.txt.gz 2009-07-26 10:12 25M netMonDom5.txt.gz 2009-10-04 12:32 25M netGorGor3.txt.gz 2011-11-27 14:11 26M chainPanTro3.txt.gz 2011-05-03 16:30 26M chr3_chainMm9Link.txt.gz 2008-03-11 12:37 27M chr19_chainOrnAna1Link.txt.gz 2008-03-11 12:06 28M chainHg38.txt.gz 2017-01-30 13:00 29M simpleRepeat.txt.gz 2008-03-11 13:39 29M xenoRefFlat.txt.gz 2020-08-22 23:36 31M chr11_chainMm9Link.txt.gz 2008-03-11 11:22 32M xenoRefGene.txt.gz 2020-08-22 23:30 34M xenoRefSeqAli.txt.gz 2020-08-22 23:36 35M chr1_chainMm9Link.txt.gz 2008-03-11 12:20 40M chr19_chainMm9Link.txt.gz 2008-03-11 11:53 41M netRheMac3.txt.gz 2012-12-02 20:28 44M netCalJac3.txt.gz 2010-06-06 19:59 51M chainMm10.txt.gz 2012-05-09 08:21 70M quality.txt.gz 2008-03-14 03:12 73M netMm10.txt.gz 2012-05-09 08:09 76M netMm9.txt.gz 2008-03-11 12:56 76M netTarSyr2.txt.gz 2015-05-25 08:41 76M phastCons8way.txt.gz 2008-03-11 13:38 81M multiz8way.txt.gz 2008-03-11 13:29 103M chainGorGor3Link.txt.gz 2011-11-27 14:12 150M chainHg19Link.txt.gz 2009-07-26 10:11 173M chainPanTro3Link.txt.gz 2011-05-03 16:24 174M chainHg38Link.txt.gz 2017-01-30 13:03 189M chainCalJac3Link.txt.gz 2010-06-06 20:00 253M chainRheMac3.txt.gz 2012-12-02 20:27 269M chainTarSyr2.txt.gz 2015-05-25 08:42 340M xenoMrna.txt.gz 2020-08-22 23:02 376M chainMonDom5.txt.gz 2009-10-04 12:34 422M chainMm10Link.txt.gz 2012-05-09 08:13 534M chainRheMac3Link.txt.gz 2012-12-02 20:29 823M chainMonDom5Link.txt.gz 2009-10-04 12:23 1.2G chainTarSyr2Link.txt.gz 2015-05-25 08:45 1.3G