This directory contains a dump of the UCSC genome annotation
database for the Apr. 2002 freeze of the SARS draft genome 
assembly, based on sequence deposited into GenBank as of 
14 April 2003. The files are updated nightly. 

Files included in this directory (updated nightly):

  - *.sql files: the MySQL commands used to create the tables.
    To see descriptions of the tables underlying Genome Browser annotation
    tracks, select the table in the Table Browser:
      http://genome.ucsc.edu/cgi-bin/hgTables?db=sc1
    and click the "describe table schema" button.  There is also a "view
    table schema" link on the configuration page for each track.

  - *.txt.gz files: the database tables in a tab-delimited format 
    compressed with gzip. 

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If you plan to download a large file or multiple files from this 
directory, we recommend that you use ftp rather than downloading the 
files via our website. To do so, ftp to hgdownload.cse.ucsc.edu, then 
go to the directory goldenPath/scApr2003/database/. To download 
multiple files, use the "mget" command:

    mget <filename1> <filename2> ...
    - or -
    mget -a (to download all the files in the directory)

All the tables in this directory are freely usable for any purpose 
except for the following:

   softberryGene.txt and softberryPep.txt -  Free for academic 
        and nonprofit use. Commercial users please contact
        Softberry Inc. at http://www.softberry.com.


      Name                                         Last modified      Size  Description
Parent Directory - all_mrna.txt.gz 2003-05-23 14:45 80K author.txt.gz 2003-05-23 14:45 710K cds.txt.gz 2003-05-23 14:45 263K cell.txt.gz 2003-05-23 14:45 6.8K chr1_viralProt.txt.gz 2003-05-23 14:45 2.1K chromInfo.txt.gz 2003-05-23 14:45 65 description.txt.gz 2003-05-23 14:45 2.7M development.txt.gz 2003-05-23 14:45 8.2K extFile.txt.gz 2003-05-23 14:45 143 gbProtAnn.txt.gz 2003-05-23 14:45 704 gcPercent.txt.gz 2003-05-23 14:45 67 geneName.txt.gz 2003-05-23 14:45 62K keyword.txt.gz 2003-05-23 14:45 132K library.txt.gz 2003-05-23 14:45 14K mrnaClone.txt.gz 2003-05-23 14:45 262K organism.txt.gz 2003-05-23 14:45 208K otherSARS.txt.gz 2003-05-23 14:45 1.0K productName.txt.gz 2003-05-23 14:45 171K pslTable.txt.gz 2003-05-23 14:45 92 seq.txt.gz 2003-05-23 14:45 3.2M sex.txt.gz 2003-05-23 14:45 203 softberryGene.txt.gz 2003-05-23 14:45 223 softberryHom.txt.gz 2003-05-23 14:45 260 softberryPep.txt.gz 2003-05-23 14:45 5.6K source.txt.gz 2003-05-23 14:45 276K tissue.txt.gz 2003-05-23 14:45 8.9K xenoBlastzMrna.txt.gz 2003-05-23 14:45 27K xenoMrna.txt.gz 2003-05-23 14:45 80K protHomolog.txt.gz 2003-06-20 08:40 5.4K protPredFile.txt.gz 2003-06-20 08:40 238 gbCdnaInfo.txt.gz 2004-09-28 17:12 3.5M grp.txt.gz 2004-10-22 04:25 204 hgFindSpec.txt.gz 2005-04-24 05:36 266 history.txt.gz 2005-07-14 05:11 278 trackDb.sql 2007-03-08 07:54 2.0K trackDb.txt.gz 2007-03-08 07:54 4.0K tableDescriptions.sql 2008-05-18 03:16 1.2K tableDescriptions.txt.gz 2008-05-18 03:16 3.8K all_mrna.sql 2013-10-01 12:48 1.3K author.sql 2013-10-01 12:48 332 cds.sql 2013-10-01 12:48 326 cell.sql 2013-10-01 12:48 328 chr1_viralProt.sql 2013-10-01 12:48 1.3K chromInfo.sql 2013-10-01 12:48 394 description.sql 2013-10-01 12:48 342 development.sql 2013-10-01 12:48 342 extFile.sql 2013-10-01 12:48 440 gbCdnaInfo.sql 2013-10-01 12:48 1.5K gbProtAnn.sql 2013-10-01 12:48 650 gcPercent.sql 2013-10-01 12:48 544 geneName.sql 2013-10-01 12:48 336 grp.sql 2013-10-01 12:48 358 hgFindSpec.sql 2013-10-01 12:48 825 history.sql 2013-10-01 12:48 533 keyword.sql 2013-10-01 12:48 334 library.sql 2013-10-01 12:48 334 mrnaClone.sql 2013-10-01 12:48 338 organism.sql 2013-10-01 12:48 336 otherSARS.sql 2013-10-01 12:48 1.3K productName.sql 2013-10-01 12:48 342 protHomolog.sql 2013-10-01 12:48 619 protPredFile.sql 2013-10-01 12:48 355 pslTable.sql 2013-10-01 12:48 1.5K seq.sql 2013-10-01 12:48 594 sex.sql 2013-10-01 12:48 326 softberryGene.sql 2013-10-01 12:48 752 softberryHom.sql 2013-10-01 12:48 381 softberryPep.sql 2013-10-01 12:48 332 source.sql 2013-10-01 12:48 332 tissue.sql 2013-10-01 12:48 332 xenoBlastzMrna.sql 2013-10-01 12:48 1.3K xenoMrna.sql 2013-10-01 12:48 1.3K