This directory contains reciprocal-best netted chains for danRer11-hg38.
- danRer11.hg38.rbest.net.gz: danRer11-referenced recip.best net to hg38.
- danRer11.hg38.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from danRer11 to hg38 through the recip.best net.
- hg38.danRer11.rbest.net.gz: hg38-referenced recip.best net.
- hg38.danRer11.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/danRer11.hg38.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2017-06-14 21:49 -
danRer11.hg38.rbest.chain.gz 2017-06-14 11:11 3.5M
danRer11.hg38.rbest.net.gz 2017-06-14 11:11 4.5M
hg38.danRer11.rbest.chain.gz 2017-06-14 11:11 3.5M
hg38.danRer11.rbest.net.gz 2017-06-14 11:11 4.6M
md5sum.txt 2017-06-14 11:11 248