This directory contains the Drosophila mojavensis 11 August 2004 assembly
from Agencourt Bioscience Corporation. The annotations were generated
by UCSC and collaborators worldwide.
Files included in this directory (updated nightly):
- *.sql files: the MySQL commands used to create the tables.
To see descriptions of the tables underlying Genome Browser annotation
tracks, select the table in the Table Browser:
http://genome.ucsc.edu/cgi-bin/hgTables?db=droMoj1
and click the "describe table schema" button. There is also a "view
table schema" link on the configuration page for each track.
- *.txt.gz files: the database tables in a tab-delimited format
compressed with gzip.
----------------------------------------------------------------
If you plan to download a large file or multiple files from this directory,
we recommend you use ftp rather than downloading the files via our website.
To do so, ftp to hgdownload.cse.ucsc.edu, then go to the directory
goldenPath/droMoj1/database. To download multiple files, use the "mget"
command:
mget <filename1> <filename2> ...
- or -
mget -a (to download all the files in the directory)
All the annotations in this directory are freely usable for any purpose.
The D. mojavensis data have been freely provided by Agencourt Bioscience
Corporation before publication for use in the UCSC Genome Browser with the
following understanding:
1. The data may be freely downloaded, used in analyses, and repackaged in
databases.
2. Users are free to use the data in scientific papers analyzing particular
genes and regions, provided that the Agencourt is properly acknowledged.
3. Agencourt reserves the right to publish the initial large-scale analyses
of the dataset, including large-scale identification of regions of
evolutionary conservation and large-scale genomic assembly.
4. Any redistribution of the data should carry this notice.
Name Last modified Size Description
Parent Directory -
all_mrna.sql 2017-10-22 06:29 2.1K
all_mrna.txt.gz 2017-10-22 06:29 2.3K
augustusGene.sql 2015-07-26 12:37 1.9K
augustusGene.txt.gz 2015-07-26 12:37 712K
bigFiles.sql 2024-12-08 03:29 1.4K
bigFiles.txt.gz 2024-12-08 03:29 33
blastDm2FB.sql 2013-10-01 12:48 1.3K
blastDm2FB.txt.gz 2005-07-28 05:23 1.3M
chainDm2.sql 2013-10-01 12:48 878
chainDm2.txt.gz 2006-01-19 05:58 6.5M
chainDm2Link.sql 2013-10-01 12:48 577
chainDm2Link.txt.gz 2006-01-19 05:59 61M
chromInfo.sql 2013-10-01 12:48 396
chromInfo.txt.gz 2004-12-13 15:27 127K
gap.sql 2013-10-01 12:48 722
gap.txt.gz 2004-12-13 15:27 28
gbDelete_tmp.sql 2013-10-01 12:48 326
gbDelete_tmp.txt.gz 2006-01-04 06:06 159K
gbLoaded.sql 2020-08-21 14:18 1.6K
gbLoaded.txt.gz 2020-08-21 14:18 15K
gcPercent.sql 2013-10-01 12:48 546
gcPercent.txt.gz 2004-12-13 15:28 151K
geneid.sql 2013-10-01 12:48 1.0K
geneid.txt.gz 2005-09-23 04:49 1.4M
genscan.sql 2013-10-01 12:48 748
genscan.txt.gz 2005-01-09 04:35 869K
genscanPep.sql 2013-10-01 12:48 330
genscanPep.txt.gz 2004-12-13 15:28 5.1M
grp.sql 2014-03-02 03:40 1.4K
grp.txt.gz 2014-03-02 03:40 223
hgFindSpec.sql 2023-03-28 13:48 1.8K
hgFindSpec.txt.gz 2023-03-28 13:48 659
history.sql 2013-10-01 12:48 537
history.txt.gz 2004-12-13 15:28 230
microsat.sql 2015-08-23 14:52 1.5K
microsat.txt.gz 2015-08-23 14:52 33K
mrnaOrientInfo.sql 2017-10-22 06:29 1.8K
mrnaOrientInfo.txt.gz 2017-10-22 06:29 689
netDm2.sql 2013-10-01 12:48 1.3K
netDm2.txt.gz 2006-01-19 06:00 8.9M
rmsk.sql 2013-10-01 12:48 1.1K
rmsk.txt.gz 2004-12-13 15:28 6.8M
simpleRepeat.sql 2013-10-01 12:48 1.1K
simpleRepeat.txt.gz 2004-12-13 15:28 2.6M
tableDescriptions.sql 2024-12-07 02:03 1.5K
tableDescriptions.txt.gz 2024-12-07 02:03 4.4K
tableList.sql 2024-12-08 03:29 1.6K
tableList.txt.gz 2024-12-08 03:29 1.9K
trackDb.sql 2023-03-28 13:48 2.1K
trackDb.txt.gz 2023-03-28 13:48 11K
xenoMrna.sql 2016-02-21 14:20 2.4K
xenoMrna.txt.gz 2016-02-21 14:20 119M
xenoRefFlat.sql 2020-08-21 14:18 1.7K
xenoRefFlat.txt.gz 2020-08-21 14:18 11M
xenoRefGene.sql 2020-08-21 14:18 2.0K
xenoRefGene.txt.gz 2020-08-21 14:18 12M
xenoRefSeqAli.sql 2020-08-21 14:18 2.1K
xenoRefSeqAli.txt.gz 2020-08-21 14:18 12M