This directory contains reciprocal-best netted chains for galGal5-melGal5. - galGal5.melGal5.rbest.net.gz: galGal5-referenced recip.best net to melGal5. - galGal5.melGal5.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from galGal5 to melGal5 through the recip.best net. - melGal5.galGal5.rbest.net.gz: melGal5-referenced recip.best net. - melGal5.galGal5.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/galGal5.melGal5.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2017-01-20 13:14 - md5sum.txt 2017-01-20 08:04 256 galGal5.melGal5.rbest.net.gz 2017-01-20 08:04 39M galGal5.melGal5.rbest.chain.gz 2017-01-20 08:03 21M melGal5.galGal5.rbest.chain.gz 2017-01-20 08:03 21M melGal5.galGal5.rbest.net.gz 2017-01-20 08:02 31M