This directory contains reciprocal-best netted chains for galGal6-fulGla1.
- galGal6.fulGla1.rbest.net.gz: galGal6-referenced recip.best net to fulGla1.
- galGal6.fulGla1.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from galGal6 to fulGla1 through the recip.best net.
- fulGla1.galGal6.rbest.net.gz: fulGla1-referenced recip.best net.
- fulGla1.galGal6.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/galGal6.fulGla1.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
fulGla1.galGal6.rbest.net.gz 2018-10-19 18:52 78M
fulGla1.galGal6.rbest.chain.gz 2018-10-19 18:53 40M
galGal6.fulGla1.rbest.chain.gz 2018-10-19 18:53 39M
galGal6.fulGla1.rbest.net.gz 2018-10-19 18:54 53M
md5sum.txt 2018-10-19 18:54 256
axtRBestNet/ 2018-10-19 23:49 -