This directory contains the Build 33 finished human genome assembly
(hg15, Apr. 2003). The chromosomal sequences were assembled by the
International Human Genome Project sequencing centers and verified
by NCBI and UCSC.
Files included in this directory:
- chr*.fa.zip: compressed FASTA sequence of each chromosome.
Each chromosome is in a separate file in a zipped Fasta format.
Repeats -- which are shown in lower case -- are annotated by
RepeatMasker run at the sensitive setting and Tandem Repeats Finder
(repeats of period 12 or less).
The main assembly is contained in the chrN.fa files, where N is the
name of the chromosome. The chrN_random.fa files contain clones that
are not yet finished or cannot be placed with certainty at a specific
place on the chromosome. In some cases, including the human HLA region
on chromosome 6, the chrN_random.fa files also contain different
haplotypes from the main assembly.
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If you plan to download a large file or multiple files from this
directory, we recommend that you use ftp rather than downloading the
files via our website. To do so, ftp to hgdownload.cse.ucsc.edu, then
go to the directory goldenPath/hg15/chromosomes. To download multiple
files, use the "mget" command:
mget <filename1> <filename2> ...
- or -
mget -a (to download all the files in the directory)
All the files in this directory are freely available for public use.
Name Last modified Size Description
Parent Directory -
chrY_random.fa.zip 2003-04-12 22:02 62K
chrY.fa.zip 2003-04-12 10:32 7.1M
chrX_random.fa.zip 2003-04-12 22:02 1.3M
chrX.fa.zip 2003-04-12 10:32 46M
chrUn_random.fa.zip 2003-04-12 22:02 127K
chrM.fa.zip 2003-04-12 10:30 5.5K
chr22.fa.zip 2003-04-12 10:49 11M
chr21.fa.zip 2003-04-12 10:48 11M
chr20.fa.zip 2003-04-12 10:48 19M
chr19_random.fa.zip 2003-04-12 22:02 69K
chr19.fa.zip 2003-04-12 10:47 17M
chr18.fa.zip 2003-04-12 10:46 23M
chr17_random.fa.zip 2003-04-12 22:02 85K
chr17.fa.zip 2003-04-12 10:45 24M
chr16_random.fa.zip 2003-04-12 22:02 6.4K
chr16.fa.zip 2003-04-12 10:44 25M
chr15_random.fa.zip 2003-04-12 22:02 103K
chr15.fa.zip 2003-04-12 10:43 25M
chr14.fa.zip 2003-04-12 10:41 27M
chr13_random.fa.zip 2003-04-12 22:02 117K
chr13.fa.zip 2003-04-12 10:40 30M
chr12_random.fa.zip 2003-04-12 22:02 154K
chr12.fa.zip 2003-04-12 10:38 40M
chr11_random.fa.zip 2003-04-12 22:02 48K
chr11.fa.zip 2003-04-12 10:37 41M
chr10_random.fa.zip 2003-04-12 22:02 152K
chr10.fa.zip 2003-04-12 10:35 41M
chr9_random.fa.zip 2003-04-12 22:02 610K
chr9.fa.zip 2003-04-12 10:30 36M
chr8_random.fa.zip 2003-04-12 22:02 120K
chr8.fa.zip 2003-04-12 10:28 44M
chr7_random.fa.zip 2003-04-12 22:02 192K
chr7.fa.zip 2003-04-12 10:26 48M
chr6_random.fa.zip 2003-04-12 22:02 3.6M
chr6.fa.zip 2003-04-12 10:24 52M
chr5.fa.zip 2003-04-12 10:21 56M
chr4_random.fa.zip 2003-04-12 22:01 264K
chr4.fa.zip 2003-04-12 10:19 58M
chr3_random.fa.zip 2003-04-12 22:01 116K
chr3.fa.zip 2003-04-12 10:16 61M
chr2_random.fa.zip 2003-04-12 22:01 315K
chr2.fa.zip 2003-04-12 10:13 74M
chr1_random.fa.zip 2003-04-12 22:01 3.1M
chr1.fa.zip 2003-04-12 10:10 68M