RT-PCR ID | Locus ID | Gencode locus ID | Internal sequence ID | Genbank AC | (re)annotated Gencode transcript ID | RT-PCR set | Extension length (from RACEfrags) | Structure of the (re) annotated transcript | Type of the (re)annotated transcript | Novel CDS annotated | Potential new CDS (identified by automatic pipeline) | Novel exons ? |
5RACE208_chr19_59847174_59847202 | LILRB4 | AC011515.1 | UGL10a09 | DQ655905 | AC011515.1-010 | 2ab | 18217 | New exons upstream (not chimeric) | Coding | No | New M (ATG) upstream | yes, not coding |
5RACE179_chr21_32906405_32906494 | TCP10L | AP000274.7 | UGLsupplB | DQ656039 | AP000274.7-004 | 1 | 26780 | chimeric | Coding | Yes (links CDS of the two adjacent loci) | continuous ORF (entirely open) | no |
5RACE179_chr21_32906301_32906360 | TCP10L | AP000274.7 | Affy08248C06 | DQ655906 | AP000274.7-004 | 2a | 26646 | chimeric | Coding | Yes (links CDS of the two adjacent loci) | continuous ORF (entirely open) | no |
5RACE179_chr21_32906301_32906360 | TCP10L | AP000274.7 | UGL9b12 | DQ655908 | AP000274.7-005 | 2a | 26646 | chimeric | Coding | Yes (links CDS of the two adjacent loci) | continuous ORF (entirely open) | no |
5RACE179_chr21_32901846_32901892 | TCP10L | AP000274.7 | Affy08252B09 | DQ655909 | AP000274.7-006 | 2b | 22178 | chimeric | Coding | Yes (links CDS of the two adjacent loci) | continuous ORF (entirely open) | no |
5RACE179_chr21_32901846_32901892 | TCP10L | AP000274.7 | UGL9a11 | DQ655910 | AP000274.7-004 | 2b | 22178 | chimeric | Coding | Yes (links CDS of the two adjacent loci) | continuous ORF (entirely open) | no |
5RACE318_chr5_142057771_142057784 | FGF1 | AC005370.1 | Affy08248A11 | DQ655914 | AC005370.1-006 | 2ab | 14 | extension of the first exon | Coding | No | no | |
5RACE318_chr5_142057771_142057784 | FGF1 | AC005370.1 | Affy08248D11 | DQ655915 | AC005370.1-010 | 2ab | 14 | extension of the first exon | Coding | yes (exon skipped) | no | |
5RACE318_chr5_142057771_142057784 | FGF1 | AC005370.1 | UGL16a06 | DQ655916 | AC005370.1-011 | 2ab | 14 | extension of the first exon | Not coding | No | no | |
5RACE318_chr5_142057771_142057784 | FGF1 | AC005370.1 | UGL16c06 | DQ655917 | AC005370.1-012 | 2ab | 14 | extension of the first exon | Not coding | No | no | |
5RACE318_chr5_142057771_142057784 | FGF1 | AC005370.1 | UGL16d06 | DQ655918 | AC005370.1-003 | 2ab | 14 | extension of the first exon | Not coding | No | no | |
5RACE369_chr7_115906409_115906409 | MET | AC002543.3 | UGL369-F-G5 | DQ656040 | AC002543.3-005 | 2ab | 1 | intronic | Coding | Yes (new internal exon) | yes, partly coding (ATG) | |
5RACE027_chrX_122819563_122819627 | STAG2 | RP11-517O1.1 | UGL1a10 | DQ655919 | RP11-517O1.1-020 | 1 | 382 | New exons upstream (not chimeric) | Coding | No | yes, not coding | |
5RACE027_chrX_122819904_122819944 | STAG2 | RP11-517O1.1 | UGL23a02 | DQ655921 | RP11-517O1.1-002 | 2ab | 41 | extension of the first exon | Coding | No | no | |
5RACE027_chrX_122819904_122819944 | STAG2 | RP11-517O1.1 | UGL23e02 | DQ655922 | RP11-517O1.1-006 | 2ab | 41 | extension of the first exon | Coding | No | no | |
5RACE145_chr5_131919535_131919635 | RAD50 | AC004041.1 | UGL7g06 | DQ655924 | AC004041.1-006 | 2a | 994 | New exons upstream (not chimeric) | Coding | No | yes, not coding | |
5RACE018_chr1_147983375_147983547 | PIP5K1A | RP11-68I18.9 | UGL018-A-G2 | DQ656041 | RP11-68I18.9-011 | 2ab | 725 | New exons upstream (not chimeric) | Coding | Yes (new ATG upstream) | New M (ATG) upstream | yes, partly coding (ATG) |
5RACE145_chr5_131919940_131919961 | RAD50 | AC004041.1 | UGL7g07 | DQ655928 | AC004041.1-006 | 2b | 589 | New exons upstream (not chimeric) | Coding | Yes (ATG downstream: shorter CDS) | no | |
5RACE290_chr7_126825724_126825744 | FSCN3 | AC073934.3 | UGL15a05 | DQ655929 | AC073934.3-005 | 3 | 1916 | New exons upstream (not chimeric) | Not coding | No | Skipping of the exon containing the M (ATG) | yes, not coding |
5RACE183_chr21_33107870_33107935 | C21orf62 | AP000280.67 | UGLsupplC | DQ656042 | AP000280.67-001 | 2ab | 66 | extension of the first exon | Coding | No | no | |
5RACE261_chr7_26987975_26988041 | HOXA9 | AC004080.4 | UGL14a03 | DQ655931 | AC004080.4-006 | 3 | 4684 | New exons upstream (not chimeric) | Not coding | No | Skipping of the exon containing the M (ATG) | yes, not coding |
5RACE185_chr21_33775307_33775371 | C21orf4 | AP000300.7 | UGL10a02 | DQ655932 | AP000300.7-010 | 1 | 1216 | New exons upstream (not chimeric) | Coding | No | yes, not coding | |
5RACE290_chr7_126825405_126825453 | FSCN3 | AC073934.3 | UGL22a07 | DQ655934 | AC073934.3-005 | 1 | 2235 | chimeric | Not coding | No | Skipping of the exon containing the M (ATG) | yes, not coding |
5RACE023_chr1_148067170_148067191 | RP11-126K1.3 | RP11-126K1.3 | UGL1d08 | DQ655935 | RP11-126K1.3-004 | 2b | 646 | New exons upstream (not chimeric) | Coding | No | New M (ATG) upstream | yes, not coding |
5RACE185_chr21_33774156_33774188 | C21orf4 | AP000300.7 | UGLsupplD | DQ656043 | AP000300.7-001 | 2ab | 33 | extension of the first exon | Coding | No | no | |
5RACE073_chr22_30216509_30216653 | EIF4ENIF1 | RP11-247I13.2 | UGL073-A-G6 | DQ656044 | RP11-247I13.2-008 | 1 | 6289 | New exons upstream (not chimeric) | Coding | No | yes, not coding | |
5RACE292_chr7_126665891_126665935 | AC000123.1 | AC000123.1 | UGL15b06 | DQ655936 | AC000123.1-008 | 3 | 39212 | New exons upstream (not chimeric) | Coding | No | yes, not coding | |
5RACE004_chr1_148296037_148296096 | CGN | RP11-74C1.3 | UGL004-A-B1 | DQ656045 | RP11-74C1.3-005 | 2a | 909 | New exons upstream (not chimeric) | Coding | No | yes, not coding | |
5RACE073_chr22_30210448_30210475 | EIF4ENIF1 | RP11-247I13.2 | UGL2a12 | DQ655937 | RP11-247I13.2-009 | 2ab | 111 | New exons upstream (not chimeric) | Coding | No | New M (ATG) upstream (entirely open) | yes, not coding |
5RACE004_chr1_148296464_148296527 | CGN | RP11-74C1.3 | UGL004-A-C1 | DQ656046 | RP11-74C1.3-006 | 2b | 482 | New exons upstream (not chimeric) | Coding | No | New M (ATG) upstream (entirely open) | yes, not coding |
5RACE028_chr1_147980842_147980907 | TCFL1 | RP11-68I18.8 | UGLsupplA | DQ656047 | RP11-68I18.8-004 | 1 | 5168 | New exons upstream (not chimeric) | Not coding | No | Skipping of the exon containing the M (ATG)(entirely open) | yes, not coding |
5RACE074_chr22_30382940_30382976 | PISD | RP5-858B16.2 | UGL3a01 | DQ655940 | RP5-858B16.2-001 | 2a | 196 | extension of the first exon | Coding | No | no | |
5RACE028_chr1_147975740_147975772 | TCFL1 | RP11-68I18.8 | UGL1a11 | DQ655941 | RP11-68I18.8-001 | 2ab | 33 | extension of the first exon | Coding | No | no | |
5RACE074_chr22_30382781_30382823 | PISD | RP5-858B16.2 | UGL074-A-H6 | DQ656048 | RP5-858B16.2-001 | 2b | 43 | extension of the first exon | Coding | No | no | |
5RACE112_chrX_152883245_152883267 | MECP2 | AF030876.1 | UGL112-B-D5 | DQ656049 | AF030876.1-006 | 4 | 0 | intronic | Not coding | No | yes, not coding | |
5RACE055_chr20_33725862_33725884 | CPNE1 | RP1-309K20.2 | UGL055-A-E5 | DQ656050 | RP1-309K20.2-029 | 1 | 9592 | chimeric | Not coding | No | no | |
5RACE112_chrX_152923396_152923422 | MECP2 | AF030876.1 | UGL112-B-E5 | DQ656051 | AF030876.1-007 | 1 | 39363 | New exons upstream (not chimeric) | Not coding | No | Skipping of the exon containing the M (ATG) (entirely open) | yes, not coding |
5RACE227_chr19_59573942_59573977 | LAIR1 | AC008746.1 | UGL12d04 | DQ655942 | AC008746.1-005 | 2b | 36 | extension of the first exon | Coding | No | no | |
5RACE055_chr20_33725711_33725737 | CPNE1 | RP1-309K20.2 | UGL2a06 | DQ655943 | RP1-309K20.2-031 | 3 | 9445 | chimeric | Not coding | No | Skipping of the exon containing the M (ATG) | no |
5RACE055_chr20_33725711_33725737 | CPNE1 | RP1-309K20.2 | UGL2d06 | DQ655945 | RP1-309K20.2-029 | 3 | 9445 | chimeric | Not coding | No | no | |
5RACE055_chr20_33725711_33725737 | CPNE1 | RP1-309K20.2 | UGL2e06 | DQ655946 | RP1-309K20.2-030 | 3 | 9445 | chimeric | Not coding | No | Skipping of the exon containing the M (ATG) | no |
5RACE083_chr22_31778284_31778399 | SYN3 | LL22NC03-28H9.1 | UGL3c10 | DQ655947 | LL22NC03-28H9.1-009 | 4 | 0 | intronic | Coding | No | yes, not coding | |
5RACE241_chr16_386727_386755 | NME4 | Z97634.4 | UGL12a10 | DQ655948 | Z97634.4-002 | 2ab | 29 | extension of the first exon | Not coding | No | no | |
5RACE201_chr19_59618039_59618247 | TTYH1 | AC008746.2 | UGL10d04 | DQ655949 | AC008746.2-010 | 2ab | 378 | New exons upstream (not chimeric) | Coding | Yes (new ATG upstream) | Skipping of the exon containing the M (ATG) | yes, partly coding (ATG) |
5RACE062_chr20_33792299_33792321 | RNPC2 | RP11-353C18.2 | UGL062-A-H5 | DQ656052 | RP11-353C18.2-038 | 4 | 0 | intronic | Not coding | No | New M (ATG) upstream (entirely open) | no (extends an existing exon) |
5RACE069_chr22_30763573_30763634 | SLC5A1 | RP1-127L4.1 | UGL069-A-E6 | DQ656053 | RP1-127L4.1-001 | 2ab | 62 | extension of the first exon | Coding | No | no | |
5RACE372_chr7_116699774_116699815 | CFTR | AC000061.1 | UGLsupplH | DQ656054 | AC000061.1-003 | 2ab | 14194 | New exons upstream (not chimeric) | Not coding | No | yes, not coding | |
5RACE005_chr9_128951111_128951115 | CRAT | RP11-247A12.5 | UGL1c02 | DQ655951 | RP11-247A12.5-009 | 4 | 0 | intronic | Not coding | No | no | |
5RACE302_chr18_59778397_59778482 | SERPINB8 | AC009802.3 | UGL302-E-B6 | DQ656055 | AC009802.2-002 | 1 | 9742 | chimeric (already annotated from the locus upstream) | Not coding | No | no | |
5RACE012_chr9_128783287_128783347 | NUP188 | RP11-167N5.2 | UGL012-A-B2 | DQ656056 | RP11-167N5.2-009 | 1 | 6245 | chimeric | Coding | Yes (links CDS of the two adjacent loci) | continuous ORF (entirely open) | no |
5RACE334_chr15_41747163_41747188 | CATSPER2 | AC011330.3 | UGL17a09 | DQ655952 | AC011330.3-012 | 4 | 0 | intronic | Not coding | No | yes, not coding | |
5RACE012_chr9_128789806_128790202 | NUP188 | RP11-167N5.2 | UGL012-A-C2 | DQ656057 | RP11-167N5.2-010 | 4 | 0 | intronic | Not coding | No | New exon inside the CDS part | yes, not coding |
5RACE297_chr18_59465796_59465822 | SERPINB11 | AC069356.3 | UGLsupplF | DQ656058 | AC069356.3-003 | 1 | 62612 | New exons upstream (not chimeric) | Not coding | No | yes, not coding | |
5RACE207_chr19_59833688_59833727 | LILRB1 | AC009892.6 | UGL10e08 | DQ655953 | AC009892.6-001 | 4 | 0 | intronic | Coding | No | New M (ATG) upstream | no (extends an existing exon) |
5RACE299_chr18_59689889_59689930 | SERPINB2 | AC072051.2 | UGL15a11 | DQ655954 | AC072051.2-005 | 1 | 16025 | New exons upstream (not chimeric) | Coding | No | yes, not coding | |
5RACE370_chr7_116045050_116045099 | CAPZA2 | AC002543.1 | UGL19a07 | DQ655955 | AC002543.1-009 | 1 | 51467 | New exons upstream (not chimeric) | Not coding | No | Skipping of the exon containing the M (ATG)(entirely open) | yes, not coding |
5RACE370_chr7_116045050_116045099 | CAPZA2 | AC002543.1 | UGL19f07 | DQ655956 | AC002543.1-010 | 1 | 51467 | New exons upstream (not chimeric) | Not coding | No | Skipping of the exon containing the M (ATG) | yes, not coding |
5RACE095_chrX_153234089_153234161 | XX-FW81657B9.1 | XX-FW81657B9.1 | UGL4b09 | DQ655957 | XX-FW81657B9.1-009 | 2ab | 73 | extension of the first exon | Not coding | No | no | |
5RACE299_chr18_59708066_59708087 | SERPINB2 | AC072051.2 | UGL299-E-A6 | DQ656059 | AC072051.2-005 | 4 | 0 | intronic | Coding | No | yes, not coding | |
5RACE173_chr21_33542890_33542928 | IL10RB | AP000295.8 | UGL9b05 | DQ655960 | AP000295.8-006 | 2a | 17643 | chimeric | Coding | Yes (links CDS of the two adjacent loci) | continuous ORF (entirely open) | no |
5RACE173_chr21_33542890_33542928 | IL10RB | AP000295.8 | UGL9d05 | DQ655961 | AP000295.8-007 | 2a | 17643 | chimeric | Not coding | No | Skipping of the exon containing the M (ATG) | no |
5RACE287_chr7_89837715_89837806 | PFTK1 | AC084381.2 | UGL15a02 | DQ655962 | AC084381.2-008 | 2b | 32747 | New exons upstream (not chimeric) | Not coding | No | Skipping of the exon containing the M (ATG) | yes, not coding |
5RACE287_chr7_89837715_89837806 | PFTK1 | AC084381.2 | UGL15b02 | DQ655963 | AC084381.2-007 | 2b | 32747 | chimeric | Not coding | No | Skipping of the exon containing the M (ATG) | no |
5RACE287_chr7_89837715_89837806 | PFTK1 | AC084381.2 | UGL15d02 | DQ655964 | AC084381.2-009 | 2b | 32747 | New exons upstream (not chimeric) | Not coding | No | Skipping of the exon containing the M (ATG) | yes, not coding |
5RACE287_chr7_89837715_89837806 | PFTK1 | AC084381.2 | UGL15e02 | DQ655965 | AC084381.2-010 | 2b | 32747 | New exons upstream (not chimeric) | Not coding | No | Skipping of the exon containing the M (ATG) | yes, not coding |
5RACE287_chr7_89837715_89837806 | PFTK1 | AC084381.2 | UGL15f02 | DQ655966 | AC084381.2-011 | 2b | 32747 | New exons upstream (not chimeric) | Not coding | No | New exon inside the CDS part,Skipping of the exon containing the M (ATG) | yes, not coding |
5RACE422_chr2_234466320_234466396 | AC006985.5 | AC006985.5 | UGL20a03 | DQ655967 | AC006985.5-007 | 1 | 2580 | New exons upstream (not chimeric) | Not coding | No | Skipping of the exon containing the M (ATG) (entirely open) | yes, not coding |
5RACE422_chr2_234466320_234466396 | AC006985.5 | AC006985.5 | UGL20c03 | DQ655968 | AC006985.5-006 | 1 | 2580 | New exons upstream (not chimeric) | Not coding | No | Skipping of the exon containing the M (ATG) | yes, not coding |
5RACE422_chr2_234466320_234466396 | AC006985.5 | AC006985.5 | UGL20g03 | DQ655969 | AC006985.5-008 | 1 | 2580 | New exons upstream (not chimeric) | Not coding | No | Skipping of the exon containing the M (ATG) | yes, not coding |
5RACE287_chr7_89740378_89740436 | PFTK1 | AC084381.2 | UGL287-E-D4 | DQ656060 | AC084381.2-007 | 2a | 130084 | chimeric | Not coding | No | Skipping of the exon containing the M (ATG) | yes, not coding (intervening exon between the 2 loci) |
5RACE174_chr21_33618563_33618802 | IFNAR1 | AP000298.3 | UGL9a08 | DQ655972 | AP000298.3-002 | 2ab | 516 | New exons upstream (not chimeric) | Not coding | No | Skipping of the exon containing the M (ATG) | yes, not coding |
5RACE155_chr5_131907481_131907503 | IL5 | AC116366.2 | UGL8e03 | DQ655974 | AC116366.2-003 | 2ab | 390 | extension of the first exon | Not coding | No | no | |
5RACE283_chr7_89489182_89489284 | STEAP2 | AC002064.1 | UGLsupplE | DQ656061 | AC002064.1-008 | 4 | 0 | intronic | Not coding | No | no (extends an existing exon) | |
5RACE283_chr7_89441551_89441572 | STEAP2 | AC002064.1 | UGL283-E-A4 | DQ656062 | AC002064.1-009 | 1 | 44100 | New exons upstream (not chimeric) | Coding | Yes (new ATG upstream) | New M (ATG) upstream | yes, partly coding (ATG) |
5RACE126_chrX_153543534_153543572 | GAB3 | CTD-2173L12.1 | UGL126-B-H6 | DQ656063 | CTD-2173L12.1-003 | 2ab | 52 | extension of the first exon | Not coding | No | Skipping of the exon containing the M (ATG) | yes, not coding |
5RACE294_chr2_118288445_118288510 | DDX18 | AC009404.1 | Affy08248B12 | DQ655975 | AC009404.1-001 | 1 | 66 | extension of the first exon | Coding | No | no | |
5RACE294_chr2_118288865_118288887 | DDX18 | AC009404.1 | Affy08254D01 | DQ655976 | AC009404.1-006 | 4 | 0 | intronic | Not coding | No | New exon inside the CDS part | yes, not coding |
5RACE175_chr21_33679163_33679252 | IFNGR2 | AP000300.6 | Affy08254E03 | DQ655977 | AP000300.6-006 | 3 | 17909 | New exons upstream (not chimeric) | Not coding | No | yes, not coding | |
5RACE245_chr16_42113_42151 | POLR3K | Z69719.1 | Affy08248B08 | DQ655978 | Z69719.1-002 | 4 | 0 | intronic | Not coding | No | no (extends an existing exon) | |
5RACE152_chr5_131375690_131375772 | ACSL6 | AC034228.1 | Affy08246A12 | DQ655980 | AC034228.1-016 | 2b | 94 | New exons upstream (not chimeric) | Coding | No | yes, not coding | |
5RACE152_chr5_131375690_131375772 | ACSL6 | AC034228.1 | Affy08246F12 | DQ655981 | AC034228.1-017 | 2b | 94 | New exons upstream (not chimeric) | Coding | No | yes, not coding | |
5RACE409_chr11_5213134_5213197 | HBD | AC104389.18 | Affy08244A08 | DQ655982 | AC104389.18-004 | 3 | 743 | New exons upstream (not chimeric) | Coding | No | yes, not coding | |
5RACE408_chr11_5207176_5207199 | HBB | AC104389.17 | Affy08250G03 | DQ655985 | AC104389.17-004 | 3 | 2196 | New exons upstream (not chimeric) | Coding | No | yes, not coding | |
5RACE259_chr7_26965357_26965495 | HOXA6 | AC004080.2 | Affy08242H09 | DQ655986 | AC004080.2-004 | 2ab | 1659 | New exons upstream (not chimeric) | Not coding | No | Skipping of the exon containing the M (ATG) | yes, not coding |
5RACE006_chr9_128922932_128922935 | DOLPP1 | RP11-167N5.4 | Affy08254D10 | DQ655991 | RP11-167N5.4-001 | 2b | 4 | extension of the first exon | Coding | No | no | |
5RACE286_chr7_89657675_89657716 | CLDN12 | AC006153.2 | Affy08254F11 | DQ655993 | AC006153.2-014 | 1 | 19724 | chimeric | Not coding | No | no | |
5RACE286_chr7_89657675_89657716 | CLDN12 | AC006153.2 | Affy08254G11 | DQ655994 | AC006153.2-015 | 1 | 19724 | chimeric | Not coding | No | no | |
5RACE286_chr7_89677341_89677398 | CLDN12 | AC006153.2 | Affy08242E11 | DQ655995 | AC006153.2-001 | 2ab | 58 | extension of the first exon | Coding | No | no | |
5RACE300_chr18_59715383_59715425 | SERPINB10 | AC009802.1 | Affy08246B09 | DQ655996 | AC009802.1-002 | 1 | 5338 | chimeric | Coding | Yes (links CDS of the two adjacent loci) | continuous ORF (entirely open) | no |
5RACE300_chr18_59715383_59715425 | SERPINB10 | AC009802.1 | Affy08246G09 | DQ655997 | AC009802.1-003 | 1 | 5338 | chimeric | Coding | Yes (links CDS of the two adjacent loci) | continuous ORF (entirely open) | no |
5RACE300_chr18_59720027_59720048 | SERPINB10 | AC009802.1 | Affy08246E10 | DQ655998 | AC009802.1-003 | 3 | 694 | chimeric | Coding | Yes (links CDS of the two adjacent loci) | continuous ORF (entirely open) | no |
5RACE300_chr18_59720027_59720048 | SERPINB10 | AC009802.1 | Affy08246F10 | DQ655999 | AC009802.1-002 | 3 | 694 | chimeric | Coding | Yes (links CDS of the two adjacent loci) | continuous ORF (entirely open) | no |
5RACE239_chr16_258721_258773 | ARHGDIG | LA16c-314G4.1 | Affy08250B05 | DQ656000 | LA16c-314G4.1-005 | 2a | 11730 | chimeric | Coding | Yes (links CDS of the two adjacent loci) | continuous ORF (entirely open) | no |
5RACE239_chr16_258721_258773 | ARHGDIG | LA16c-314G4.1 | Affy08250F05 | DQ656001 | LA16c-314G4.1-006 | 2a | 11730 | chimeric | Coding | Yes (links CDS of the two adjacent loci) | continuous ORF (entirely open) | no |
5RACE203_chr19_59700906_59701072 | LAIR2 | AC008746.8 | Affy08256A02 | DQ656002 | AC008746.8-003 | 1 | 4919 | New exons upstream (not chimeric) | Coding | Yes (new ATG upstream) | Skipping of the exon containing the M (ATG) | yes, partly coding (ATG) |
5RACE203_chr19_59700906_59701072 | LAIR2 | AC008746.8 | Affy08256C02 | DQ656003 | AC008746.8-004 | 1 | 4919 | New exons upstream (not chimeric) | Coding | Yes (new ATG upstream) | Skipping of the exon containing the M (ATG) | yes, partly coding (ATG) |
5RACE323_chr5_56303234_56303255 | AC008937.5 | AC008937.5 | Affy08256B03 | DQ656004 | AC008937.5-011 | 1 | 19480 | New exons upstream (not chimeric) | Not coding | No | Skipping of the exon containing the M (ATG) | yes, not coding |
5RACE323_chr5_56303234_56303255 | AC008937.5 | AC008937.5 | Affy08256D03 | DQ656005 | AC008937.5-009 | 1 | 19480 | New exons upstream (not chimeric) | Not coding | No | Skipping of the exon containing the M (ATG) | yes, not coding |
5RACE323_chr5_56303234_56303255 | AC008937.5 | AC008937.5 | Affy08256F03 | DQ656006 | AC008937.5-010 | 1 | 19480 | New exons upstream (not chimeric) | Not coding | No | Skipping of the exon containing the M (ATG) (entirely open) | yes, not coding |
5RACE404_chr11_5102288_5102328 | AC113331.10 | AC113331.10 | Affy08256A04 | DQ656008 | AC113331.10-002 | 1 | 2944 | New exons upstream (not chimeric) | Not coding | No | yes, not coding | |
5RACE404_chr11_5102288_5102328 | AC113331.10 | AC113331.10 | Affy08256B04 | DQ656009 | AC113331.10-003 | 1 | 2944 | New exons upstream (not chimeric) | Not coding | No | yes, not coding | |
5RACE367_chr7_115522073_115522115 | CAV2 | AC006159.1 | Affy08256G06 | DQ656013 | AC006159.1-007 | 1 | 211174 | New exons upstream (not chimeric) | Not coding | No | Skipping of the exon containing the M (ATG) | yes, not coding |
5RACE367_chr7_115522073_115522115 | CAV2 | AC006159.1 | 5A05 | EF070113 | AC006159.1-008 | 1 | 211174 | New exons upstream (not chimeric) | Not coding | No | yes, not coding | |
5RACE367_chr7_115522073_115522115 | CAV2 | AC006159.1 | 5A06 | EF070114 | AC006159.1-009 | 1 | 211174 | New exons upstream (not chimeric) | Not coding | No | yes, not coding | |
5RACE367_chr7_115522073_115522115 | CAV2 | AC006159.1 | 5A08 | EF070115 | AC006159.1-010 | 1 | 211174 | New exons upstream (not chimeric) | Not coding | No | yes, not coding | |
5RACE367_chr7_115522073_115522115 | CAV2 | AC006159.1 | 5B05 | EF070116 | AC006159.1-011 | 1 | 211174 | New exons upstream (not chimeric) | Not coding | No | Skipping of the exon containing the M (ATG) | yes, not coding |
5RACE367_chr7_115522073_115522115 | CAV2 | AC006159.1 | 5C05 | EF070117 | AC006159.1-012 | 1 | 211174 | New exons upstream (not chimeric) | Not coding | No | Skipping of the exon containing the M (ATG) | yes, not coding |
5RACE367_chr7_115522073_115522115 | CAV2 | AC006159.1 | 5C07 | EF070118 | AC006159.1-013 | 1 | 211174 | New exons upstream (not chimeric) | Not coding | No | Skipping of the exon containing the M (ATG) | yes, not coding |
5RACE367_chr7_115522073_115522115 | CAV2 | AC006159.1 | 5D05 | EF070119 | AC006159.1-014 | 1 | 211174 | New exons upstream (not chimeric) | Not coding | No | Skipping of the exon containing the M (ATG) | yes, not coding |
5RACE367_chr7_115522073_115522115 | CAV2 | AC006159.1 | 5D07 | EF070120 | AC006159.1-015 | 1 | 211174 | New exons upstream (not chimeric) | Not coding | No | yes, not coding | |
5RACE367_chr7_115522073_115522115 | CAV2 | AC006159.1 | 5E05 | EF070121 | AC006159.1-016 | 1 | 211174 | New exons upstream (not chimeric) | Not coding | No | Skipping of the exon containing the M (ATG) | yes, not coding |
5RACE367_chr7_115522073_115522115 | CAV2 | AC006159.1 | 5E06 | EF070122 | AC006159.1-017 | 1 | 211174 | New exons upstream (not chimeric) | Not coding | No | Skipping of the exon containing the M (ATG) | yes, not coding |
5RACE367_chr7_115523874_115523910 | CAV2 | AC006159.1 | Affy08256B07 | DQ656015 | AC006159.1-007 | 3 | 209373 | New exons upstream (not chimeric) | Not coding | No | Skipping of the exon containing the M (ATG) | yes, not coding |
5RACE367_chr7_115523874_115523910 | CAV2 | AC006159.1 | Affy08256F07 | DQ656017 | AC006159.1-006 | 3 | 209373 | New exons upstream (not chimeric) | Not coding | No | yes, not coding | |
5RACE367_chr7_115523874_115523910 | CAV2 | AC006159.1 | Affy3F10-1 | DQ656068 | AC006159.1-004 | 3 | 209373 | New exons upstream (not chimeric) | Not coding | No | New exon inside the CDS part | yes, not coding |
5RACE367_chr7_115523874_115523910 | CAV2 | AC006159.1 | Affy3F10-7 | DQ656069 | AC006159.1-005 | 3 | 209373 | New exons upstream (not chimeric) | Not coding | No | yes, not coding | |
5RACE411_chr11_5623571_5623597 | HBG2 | AC104389.21 | Affy2H6-2 | DQ656066 | AC104389.21-001 | 3 | 140186 | chimeric | Coding | No | yes, not coding | |
5RACE007_chr6_41645877_41645938 | FOXP4 | RP11-328M4.1 | Affy08256A09 | DQ656018 | RP11-328M4.1-004 | 4 | 0 | intronic | Not coding | No | New exon inside the CDS part | yes, not coding |
5RACE374_chr7_116662093_116662131 | ASZ1 | AC002465.3 | Affy08256D10 | DQ656019 | AC002465.3-005 | 1 | 619 | New exons upstream (not chimeric) | Coding | Yes (ATG downstream: shorter CDS) | Skipping of the exon containing the M (ATG) | no |
5RACE374_chr7_116661513_116661518 | ASZ1 | AC002465.3 | Affy08256A11 | DQ656020 | AC002465.3-001 | 3 | 6 | extension of the first exon | Coding | No | no | |
5RACE190_chr21_34209825_34209901 | ATP5O | AP000313.5 | Affy08250G07 | DQ656023 | AP000313.5-007 | 4 | 0 | intronic | Not coding | No | New exon inside the CDS part | no (extends exon into intron) |
5RACE014_chr6_41829745_41829856 | PGC | RP11-298J23.1 | Affy08256B12 | DQ656024 | RP11-298J23.1-004 | 2ab | 6743 | New exons upstream (not chimeric) | Coding | Yes (new ATG upstream) | Skipping of the exon containing the M (ATG) | yes, partly coding (ATG) |
5RACE188_chr21_34206481_34206506 | DONSON | AP000304.9 | Affy08248B10 | DQ656027 | AP000304.11-012 | 1 | 316865 | chimeric | Coding | Yes (links CDS of the two adjacent loci) | Skipping of the M (entirely open),Chimeric transcript with continuous ORF (entirely open) | no |
5RACE285_chr7_89614334_89614360 | AC006153.3 | AC006153.3 | Affy08258B04 | DQ656028 | AC006153.3-007 | 3 | 6266 | New exons upstream (not chimeric) | Not coding | No | Skipping of the exon containing the M (ATG) | yes, not coding |
5RACE285_chr7_89614334_89614360 | AC006153.3 | AC006153.3 | Affy08258C04 | DQ656029 | AC006153.3-008 | 3 | 6266 | New exons upstream (not chimeric) | Not coding | No | Skipping of the exon containing the M (ATG) | yes, not coding |
5RACE285_chr7_89614334_89614360 | AC006153.3 | AC006153.3 | Affy08258D04 | DQ656030 | AC006153.3-010 | 3 | 6266 | New exons upstream (not chimeric) | Not coding | No | Skipping of the exon containing the M (ATG) | yes, not coding |
5RACE285_chr7_89614334_89614360 | AC006153.3 | AC006153.3 | Affy08258H04 | DQ656031 | AC006153.3-009 | 3 | 6266 | New exons upstream (not chimeric) | Not coding | No | Skipping of the exon containing the M (ATG) | yes, not coding |
5RACE393_chr11_5685993_5686053 | OR56B1 | AC131574.4 | Affy08250A12 | DQ656032 | AC131574.4-003 | 2a | 28330 | chimeric | Not coding | No | yes, not coding | |
5RACE393_chr11_5685993_5686053 | OR56B1 | AC131574.4 | Affy08250B12 | DQ656033 | AC131574.4-002 | 2a | 28330 | chimeric | Not coding | No | yes, not coding | |
5RACE011_chr6_41411364_41411474 | NCR2 | RP1-149M18.2 | Affy08252A03 | DQ656036 | RP1-149M18.2-001 | 1 | 141 | extension of the first exon | Coding | No | New M (ATG) upstream | no |
5RACE133_chr6_74228516_74228563 | MTO1 | RP11-505P4.1 | Affy08242A03 | DQ656037 | RP11-505P4.1-011 | 4 | 0 | intronic | Coding | No | no (extends an existing exon) | |
5RACE202_chr19_59652582_59652671 | LENG8 | AC008746.4 | Affy08258B01 | DQ656038 | AC008746.4-003 | 4 | 0 | extension of the first exon | Coding | No | New M (ATG) upstream (entirely open) | no |