RT-PCR ID Locus ID Gencode locus ID Internal sequence ID Genbank AC (re)annotated Gencode transcript ID RT-PCR set Extension length (from RACEfrags) Structure of the (re) annotated transcript Type of the (re)annotated transcript Novel CDS annotated Potential new CDS (identified by automatic pipeline) Novel exons ?
5RACE208_chr19_59847174_59847202 LILRB4 AC011515.1 UGL10a09 DQ655905 AC011515.1-010 2ab 18217 New exons upstream (not chimeric) Coding No New M (ATG) upstream yes, not coding
5RACE179_chr21_32906405_32906494 TCP10L AP000274.7 UGLsupplB DQ656039 AP000274.7-004 1 26780 chimeric Coding Yes (links CDS of the two adjacent loci) continuous ORF (entirely open) no
5RACE179_chr21_32906301_32906360 TCP10L AP000274.7 Affy08248C06 DQ655906 AP000274.7-004 2a 26646 chimeric Coding Yes (links CDS of the two adjacent loci) continuous ORF (entirely open) no
5RACE179_chr21_32906301_32906360 TCP10L AP000274.7 UGL9b12 DQ655908 AP000274.7-005 2a 26646 chimeric Coding Yes (links CDS of the two adjacent loci) continuous ORF (entirely open) no
5RACE179_chr21_32901846_32901892 TCP10L AP000274.7 Affy08252B09 DQ655909 AP000274.7-006 2b 22178 chimeric Coding Yes (links CDS of the two adjacent loci) continuous ORF (entirely open) no
5RACE179_chr21_32901846_32901892 TCP10L AP000274.7 UGL9a11 DQ655910 AP000274.7-004 2b 22178 chimeric Coding Yes (links CDS of the two adjacent loci) continuous ORF (entirely open) no
5RACE318_chr5_142057771_142057784 FGF1 AC005370.1 Affy08248A11 DQ655914 AC005370.1-006 2ab 14 extension of the first exon Coding No
no
5RACE318_chr5_142057771_142057784 FGF1 AC005370.1 Affy08248D11 DQ655915 AC005370.1-010 2ab 14 extension of the first exon Coding yes (exon skipped)
no
5RACE318_chr5_142057771_142057784 FGF1 AC005370.1 UGL16a06 DQ655916 AC005370.1-011 2ab 14 extension of the first exon Not coding No
no
5RACE318_chr5_142057771_142057784 FGF1 AC005370.1 UGL16c06 DQ655917 AC005370.1-012 2ab 14 extension of the first exon Not coding No
no
5RACE318_chr5_142057771_142057784 FGF1 AC005370.1 UGL16d06 DQ655918 AC005370.1-003 2ab 14 extension of the first exon Not coding No
no
5RACE369_chr7_115906409_115906409 MET AC002543.3 UGL369-F-G5 DQ656040 AC002543.3-005 2ab 1 intronic Coding Yes (new internal exon)
yes, partly coding (ATG)
5RACE027_chrX_122819563_122819627 STAG2 RP11-517O1.1 UGL1a10 DQ655919 RP11-517O1.1-020 1 382 New exons upstream (not chimeric) Coding No
yes, not coding
5RACE027_chrX_122819904_122819944 STAG2 RP11-517O1.1 UGL23a02 DQ655921 RP11-517O1.1-002 2ab 41 extension of the first exon Coding No
no
5RACE027_chrX_122819904_122819944 STAG2 RP11-517O1.1 UGL23e02 DQ655922 RP11-517O1.1-006 2ab 41 extension of the first exon Coding No
no
5RACE145_chr5_131919535_131919635 RAD50 AC004041.1 UGL7g06 DQ655924 AC004041.1-006 2a 994 New exons upstream (not chimeric) Coding No
yes, not coding
5RACE018_chr1_147983375_147983547 PIP5K1A RP11-68I18.9 UGL018-A-G2 DQ656041 RP11-68I18.9-011 2ab 725 New exons upstream (not chimeric) Coding Yes (new ATG upstream) New M (ATG) upstream yes, partly coding (ATG)
5RACE145_chr5_131919940_131919961 RAD50 AC004041.1 UGL7g07 DQ655928 AC004041.1-006 2b 589 New exons upstream (not chimeric) Coding Yes (ATG downstream: shorter CDS)
no
5RACE290_chr7_126825724_126825744 FSCN3 AC073934.3 UGL15a05 DQ655929 AC073934.3-005 3 1916 New exons upstream (not chimeric) Not coding No Skipping of the exon containing the M (ATG) yes, not coding
5RACE183_chr21_33107870_33107935 C21orf62 AP000280.67 UGLsupplC DQ656042 AP000280.67-001 2ab 66 extension of the first exon Coding No
no
5RACE261_chr7_26987975_26988041 HOXA9 AC004080.4 UGL14a03 DQ655931 AC004080.4-006 3 4684 New exons upstream (not chimeric) Not coding No Skipping of the exon containing the M (ATG) yes, not coding
5RACE185_chr21_33775307_33775371 C21orf4 AP000300.7 UGL10a02 DQ655932 AP000300.7-010 1 1216 New exons upstream (not chimeric) Coding No
yes, not coding
5RACE290_chr7_126825405_126825453 FSCN3 AC073934.3 UGL22a07 DQ655934 AC073934.3-005 1 2235 chimeric Not coding No Skipping of the exon containing the M (ATG) yes, not coding
5RACE023_chr1_148067170_148067191 RP11-126K1.3 RP11-126K1.3 UGL1d08 DQ655935 RP11-126K1.3-004 2b 646 New exons upstream (not chimeric) Coding No New M (ATG) upstream yes, not coding
5RACE185_chr21_33774156_33774188 C21orf4 AP000300.7 UGLsupplD DQ656043 AP000300.7-001 2ab 33 extension of the first exon Coding No
no
5RACE073_chr22_30216509_30216653 EIF4ENIF1 RP11-247I13.2 UGL073-A-G6 DQ656044 RP11-247I13.2-008 1 6289 New exons upstream (not chimeric) Coding No
yes, not coding
5RACE292_chr7_126665891_126665935 AC000123.1 AC000123.1 UGL15b06 DQ655936 AC000123.1-008 3 39212 New exons upstream (not chimeric) Coding No
yes, not coding
5RACE004_chr1_148296037_148296096 CGN RP11-74C1.3 UGL004-A-B1 DQ656045 RP11-74C1.3-005 2a 909 New exons upstream (not chimeric) Coding No
yes, not coding
5RACE073_chr22_30210448_30210475 EIF4ENIF1 RP11-247I13.2 UGL2a12 DQ655937 RP11-247I13.2-009 2ab 111 New exons upstream (not chimeric) Coding No New M (ATG) upstream (entirely open) yes, not coding
5RACE004_chr1_148296464_148296527 CGN RP11-74C1.3 UGL004-A-C1 DQ656046 RP11-74C1.3-006 2b 482 New exons upstream (not chimeric) Coding No New M (ATG) upstream (entirely open) yes, not coding
5RACE028_chr1_147980842_147980907 TCFL1 RP11-68I18.8 UGLsupplA DQ656047 RP11-68I18.8-004 1 5168 New exons upstream (not chimeric) Not coding No Skipping of the exon containing the M (ATG)(entirely open) yes, not coding
5RACE074_chr22_30382940_30382976 PISD RP5-858B16.2 UGL3a01 DQ655940 RP5-858B16.2-001 2a 196 extension of the first exon Coding No
no
5RACE028_chr1_147975740_147975772 TCFL1 RP11-68I18.8 UGL1a11 DQ655941 RP11-68I18.8-001 2ab 33 extension of the first exon Coding No
no
5RACE074_chr22_30382781_30382823 PISD RP5-858B16.2 UGL074-A-H6 DQ656048 RP5-858B16.2-001 2b 43 extension of the first exon Coding No
no
5RACE112_chrX_152883245_152883267 MECP2 AF030876.1 UGL112-B-D5 DQ656049 AF030876.1-006 4 0 intronic Not coding No
yes, not coding
5RACE055_chr20_33725862_33725884 CPNE1 RP1-309K20.2 UGL055-A-E5 DQ656050 RP1-309K20.2-029 1 9592 chimeric Not coding No
no
5RACE112_chrX_152923396_152923422 MECP2 AF030876.1 UGL112-B-E5 DQ656051 AF030876.1-007 1 39363 New exons upstream (not chimeric) Not coding No Skipping of the exon containing the M (ATG) (entirely open) yes, not coding
5RACE227_chr19_59573942_59573977 LAIR1 AC008746.1 UGL12d04 DQ655942 AC008746.1-005 2b 36 extension of the first exon Coding No
no
5RACE055_chr20_33725711_33725737 CPNE1 RP1-309K20.2 UGL2a06 DQ655943 RP1-309K20.2-031 3 9445 chimeric Not coding No Skipping of the exon containing the M (ATG) no
5RACE055_chr20_33725711_33725737 CPNE1 RP1-309K20.2 UGL2d06 DQ655945 RP1-309K20.2-029 3 9445 chimeric Not coding No
no
5RACE055_chr20_33725711_33725737 CPNE1 RP1-309K20.2 UGL2e06 DQ655946 RP1-309K20.2-030 3 9445 chimeric Not coding No Skipping of the exon containing the M (ATG) no
5RACE083_chr22_31778284_31778399 SYN3 LL22NC03-28H9.1 UGL3c10 DQ655947 LL22NC03-28H9.1-009 4 0 intronic Coding No
yes, not coding
5RACE241_chr16_386727_386755 NME4 Z97634.4 UGL12a10 DQ655948 Z97634.4-002 2ab 29 extension of the first exon Not coding No
no
5RACE201_chr19_59618039_59618247 TTYH1 AC008746.2 UGL10d04 DQ655949 AC008746.2-010 2ab 378 New exons upstream (not chimeric) Coding Yes (new ATG upstream) Skipping of the exon containing the M (ATG) yes, partly coding (ATG)
5RACE062_chr20_33792299_33792321 RNPC2 RP11-353C18.2 UGL062-A-H5 DQ656052 RP11-353C18.2-038 4 0 intronic Not coding No New M (ATG) upstream (entirely open) no (extends an existing exon)
5RACE069_chr22_30763573_30763634 SLC5A1 RP1-127L4.1 UGL069-A-E6 DQ656053 RP1-127L4.1-001 2ab 62 extension of the first exon Coding No
no
5RACE372_chr7_116699774_116699815 CFTR AC000061.1 UGLsupplH DQ656054 AC000061.1-003 2ab 14194 New exons upstream (not chimeric) Not coding No
yes, not coding
5RACE005_chr9_128951111_128951115 CRAT RP11-247A12.5 UGL1c02 DQ655951 RP11-247A12.5-009 4 0 intronic Not coding No
no
5RACE302_chr18_59778397_59778482 SERPINB8 AC009802.3 UGL302-E-B6 DQ656055 AC009802.2-002 1 9742 chimeric (already annotated from the locus upstream) Not coding No
no
5RACE012_chr9_128783287_128783347 NUP188 RP11-167N5.2 UGL012-A-B2 DQ656056 RP11-167N5.2-009 1 6245 chimeric Coding Yes (links CDS of the two adjacent loci) continuous ORF (entirely open) no
5RACE334_chr15_41747163_41747188 CATSPER2 AC011330.3 UGL17a09 DQ655952 AC011330.3-012 4 0 intronic Not coding No
yes, not coding
5RACE012_chr9_128789806_128790202 NUP188 RP11-167N5.2 UGL012-A-C2 DQ656057 RP11-167N5.2-010 4 0 intronic Not coding No New exon inside the CDS part yes, not coding
5RACE297_chr18_59465796_59465822 SERPINB11 AC069356.3 UGLsupplF DQ656058 AC069356.3-003 1 62612 New exons upstream (not chimeric) Not coding No
yes, not coding
5RACE207_chr19_59833688_59833727 LILRB1 AC009892.6 UGL10e08 DQ655953 AC009892.6-001 4 0 intronic Coding No New M (ATG) upstream no (extends an existing exon)
5RACE299_chr18_59689889_59689930 SERPINB2 AC072051.2 UGL15a11 DQ655954 AC072051.2-005 1 16025 New exons upstream (not chimeric) Coding No
yes, not coding
5RACE370_chr7_116045050_116045099 CAPZA2 AC002543.1 UGL19a07 DQ655955 AC002543.1-009 1 51467 New exons upstream (not chimeric) Not coding No Skipping of the exon containing the M (ATG)(entirely open) yes, not coding
5RACE370_chr7_116045050_116045099 CAPZA2 AC002543.1 UGL19f07 DQ655956 AC002543.1-010 1 51467 New exons upstream (not chimeric) Not coding No Skipping of the exon containing the M (ATG) yes, not coding
5RACE095_chrX_153234089_153234161 XX-FW81657B9.1 XX-FW81657B9.1 UGL4b09 DQ655957 XX-FW81657B9.1-009 2ab 73 extension of the first exon Not coding No
no
5RACE299_chr18_59708066_59708087 SERPINB2 AC072051.2 UGL299-E-A6 DQ656059 AC072051.2-005 4 0 intronic Coding No
yes, not coding
5RACE173_chr21_33542890_33542928 IL10RB AP000295.8 UGL9b05 DQ655960 AP000295.8-006 2a 17643 chimeric Coding Yes (links CDS of the two adjacent loci) continuous ORF (entirely open) no
5RACE173_chr21_33542890_33542928 IL10RB AP000295.8 UGL9d05 DQ655961 AP000295.8-007 2a 17643 chimeric Not coding No Skipping of the exon containing the M (ATG) no
5RACE287_chr7_89837715_89837806 PFTK1 AC084381.2 UGL15a02 DQ655962 AC084381.2-008 2b 32747 New exons upstream (not chimeric) Not coding No Skipping of the exon containing the M (ATG) yes, not coding
5RACE287_chr7_89837715_89837806 PFTK1 AC084381.2 UGL15b02 DQ655963 AC084381.2-007 2b 32747 chimeric Not coding No Skipping of the exon containing the M (ATG) no
5RACE287_chr7_89837715_89837806 PFTK1 AC084381.2 UGL15d02 DQ655964 AC084381.2-009 2b 32747 New exons upstream (not chimeric) Not coding No Skipping of the exon containing the M (ATG) yes, not coding
5RACE287_chr7_89837715_89837806 PFTK1 AC084381.2 UGL15e02 DQ655965 AC084381.2-010 2b 32747 New exons upstream (not chimeric) Not coding No Skipping of the exon containing the M (ATG) yes, not coding
5RACE287_chr7_89837715_89837806 PFTK1 AC084381.2 UGL15f02 DQ655966 AC084381.2-011 2b 32747 New exons upstream (not chimeric) Not coding No New exon inside the CDS part,Skipping of the exon containing the M (ATG) yes, not coding
5RACE422_chr2_234466320_234466396 AC006985.5 AC006985.5 UGL20a03 DQ655967 AC006985.5-007 1 2580 New exons upstream (not chimeric) Not coding No Skipping of the exon containing the M (ATG) (entirely open) yes, not coding
5RACE422_chr2_234466320_234466396 AC006985.5 AC006985.5 UGL20c03 DQ655968 AC006985.5-006 1 2580 New exons upstream (not chimeric) Not coding No Skipping of the exon containing the M (ATG) yes, not coding
5RACE422_chr2_234466320_234466396 AC006985.5 AC006985.5 UGL20g03 DQ655969 AC006985.5-008 1 2580 New exons upstream (not chimeric) Not coding No Skipping of the exon containing the M (ATG) yes, not coding
5RACE287_chr7_89740378_89740436 PFTK1 AC084381.2 UGL287-E-D4 DQ656060 AC084381.2-007 2a 130084 chimeric Not coding No Skipping of the exon containing the M (ATG) yes, not coding (intervening exon between the 2 loci)
5RACE174_chr21_33618563_33618802 IFNAR1 AP000298.3 UGL9a08 DQ655972 AP000298.3-002 2ab 516 New exons upstream (not chimeric) Not coding No Skipping of the exon containing the M (ATG) yes, not coding
5RACE155_chr5_131907481_131907503 IL5 AC116366.2 UGL8e03 DQ655974 AC116366.2-003 2ab 390 extension of the first exon Not coding No
no
5RACE283_chr7_89489182_89489284 STEAP2 AC002064.1 UGLsupplE DQ656061 AC002064.1-008 4 0 intronic Not coding No
no (extends an existing exon)
5RACE283_chr7_89441551_89441572 STEAP2 AC002064.1 UGL283-E-A4 DQ656062 AC002064.1-009 1 44100 New exons upstream (not chimeric) Coding Yes (new ATG upstream) New M (ATG) upstream yes, partly coding (ATG)
5RACE126_chrX_153543534_153543572 GAB3 CTD-2173L12.1 UGL126-B-H6 DQ656063 CTD-2173L12.1-003 2ab 52 extension of the first exon Not coding No Skipping of the exon containing the M (ATG) yes, not coding
5RACE294_chr2_118288445_118288510 DDX18 AC009404.1 Affy08248B12 DQ655975 AC009404.1-001 1 66 extension of the first exon Coding No
no
5RACE294_chr2_118288865_118288887 DDX18 AC009404.1 Affy08254D01 DQ655976 AC009404.1-006 4 0 intronic Not coding No New exon inside the CDS part yes, not coding
5RACE175_chr21_33679163_33679252 IFNGR2 AP000300.6 Affy08254E03 DQ655977 AP000300.6-006 3 17909 New exons upstream (not chimeric) Not coding No
yes, not coding
5RACE245_chr16_42113_42151 POLR3K Z69719.1 Affy08248B08 DQ655978 Z69719.1-002 4 0 intronic Not coding No
no (extends an existing exon)
5RACE152_chr5_131375690_131375772 ACSL6 AC034228.1 Affy08246A12 DQ655980 AC034228.1-016 2b 94 New exons upstream (not chimeric) Coding No
yes, not coding
5RACE152_chr5_131375690_131375772 ACSL6 AC034228.1 Affy08246F12 DQ655981 AC034228.1-017 2b 94 New exons upstream (not chimeric) Coding No
yes, not coding
5RACE409_chr11_5213134_5213197 HBD AC104389.18 Affy08244A08 DQ655982 AC104389.18-004 3 743 New exons upstream (not chimeric) Coding No
yes, not coding
5RACE408_chr11_5207176_5207199 HBB AC104389.17 Affy08250G03 DQ655985 AC104389.17-004 3 2196 New exons upstream (not chimeric) Coding No
yes, not coding
5RACE259_chr7_26965357_26965495 HOXA6 AC004080.2 Affy08242H09 DQ655986 AC004080.2-004 2ab 1659 New exons upstream (not chimeric) Not coding No Skipping of the exon containing the M (ATG) yes, not coding
5RACE006_chr9_128922932_128922935 DOLPP1 RP11-167N5.4 Affy08254D10 DQ655991 RP11-167N5.4-001 2b 4 extension of the first exon Coding No
no
5RACE286_chr7_89657675_89657716 CLDN12 AC006153.2 Affy08254F11 DQ655993 AC006153.2-014 1 19724 chimeric Not coding No
no
5RACE286_chr7_89657675_89657716 CLDN12 AC006153.2 Affy08254G11 DQ655994 AC006153.2-015 1 19724 chimeric Not coding No
no
5RACE286_chr7_89677341_89677398 CLDN12 AC006153.2 Affy08242E11 DQ655995 AC006153.2-001 2ab 58 extension of the first exon Coding No
no
5RACE300_chr18_59715383_59715425 SERPINB10 AC009802.1 Affy08246B09 DQ655996 AC009802.1-002 1 5338 chimeric Coding Yes (links CDS of the two adjacent loci) continuous ORF (entirely open) no
5RACE300_chr18_59715383_59715425 SERPINB10 AC009802.1 Affy08246G09 DQ655997 AC009802.1-003 1 5338 chimeric Coding Yes (links CDS of the two adjacent loci) continuous ORF (entirely open) no
5RACE300_chr18_59720027_59720048 SERPINB10 AC009802.1 Affy08246E10 DQ655998 AC009802.1-003 3 694 chimeric Coding Yes (links CDS of the two adjacent loci) continuous ORF (entirely open) no
5RACE300_chr18_59720027_59720048 SERPINB10 AC009802.1 Affy08246F10 DQ655999 AC009802.1-002 3 694 chimeric Coding Yes (links CDS of the two adjacent loci) continuous ORF (entirely open) no
5RACE239_chr16_258721_258773 ARHGDIG LA16c-314G4.1 Affy08250B05 DQ656000 LA16c-314G4.1-005 2a 11730 chimeric Coding Yes (links CDS of the two adjacent loci) continuous ORF (entirely open) no
5RACE239_chr16_258721_258773 ARHGDIG LA16c-314G4.1 Affy08250F05 DQ656001 LA16c-314G4.1-006 2a 11730 chimeric Coding Yes (links CDS of the two adjacent loci) continuous ORF (entirely open) no
5RACE203_chr19_59700906_59701072 LAIR2 AC008746.8 Affy08256A02 DQ656002 AC008746.8-003 1 4919 New exons upstream (not chimeric) Coding Yes (new ATG upstream) Skipping of the exon containing the M (ATG) yes, partly coding (ATG)
5RACE203_chr19_59700906_59701072 LAIR2 AC008746.8 Affy08256C02 DQ656003 AC008746.8-004 1 4919 New exons upstream (not chimeric) Coding Yes (new ATG upstream) Skipping of the exon containing the M (ATG) yes, partly coding (ATG)
5RACE323_chr5_56303234_56303255 AC008937.5 AC008937.5 Affy08256B03 DQ656004 AC008937.5-011 1 19480 New exons upstream (not chimeric) Not coding No Skipping of the exon containing the M (ATG) yes, not coding
5RACE323_chr5_56303234_56303255 AC008937.5 AC008937.5 Affy08256D03 DQ656005 AC008937.5-009 1 19480 New exons upstream (not chimeric) Not coding No Skipping of the exon containing the M (ATG) yes, not coding
5RACE323_chr5_56303234_56303255 AC008937.5 AC008937.5 Affy08256F03 DQ656006 AC008937.5-010 1 19480 New exons upstream (not chimeric) Not coding No Skipping of the exon containing the M (ATG) (entirely open) yes, not coding
5RACE404_chr11_5102288_5102328 AC113331.10 AC113331.10 Affy08256A04 DQ656008 AC113331.10-002 1 2944 New exons upstream (not chimeric) Not coding No
yes, not coding
5RACE404_chr11_5102288_5102328 AC113331.10 AC113331.10 Affy08256B04 DQ656009 AC113331.10-003 1 2944 New exons upstream (not chimeric) Not coding No
yes, not coding
5RACE367_chr7_115522073_115522115 CAV2 AC006159.1 Affy08256G06 DQ656013 AC006159.1-007 1 211174 New exons upstream (not chimeric) Not coding No Skipping of the exon containing the M (ATG) yes, not coding
5RACE367_chr7_115522073_115522115 CAV2 AC006159.1 5A05 EF070113 AC006159.1-008 1 211174 New exons upstream (not chimeric) Not coding No
yes, not coding
5RACE367_chr7_115522073_115522115 CAV2 AC006159.1 5A06 EF070114 AC006159.1-009 1 211174 New exons upstream (not chimeric) Not coding No
yes, not coding
5RACE367_chr7_115522073_115522115 CAV2 AC006159.1 5A08 EF070115 AC006159.1-010 1 211174 New exons upstream (not chimeric) Not coding No
yes, not coding
5RACE367_chr7_115522073_115522115 CAV2 AC006159.1 5B05 EF070116 AC006159.1-011 1 211174 New exons upstream (not chimeric) Not coding No Skipping of the exon containing the M (ATG) yes, not coding
5RACE367_chr7_115522073_115522115 CAV2 AC006159.1 5C05 EF070117 AC006159.1-012 1 211174 New exons upstream (not chimeric) Not coding No Skipping of the exon containing the M (ATG) yes, not coding
5RACE367_chr7_115522073_115522115 CAV2 AC006159.1 5C07 EF070118 AC006159.1-013 1 211174 New exons upstream (not chimeric) Not coding No Skipping of the exon containing the M (ATG) yes, not coding
5RACE367_chr7_115522073_115522115 CAV2 AC006159.1 5D05 EF070119 AC006159.1-014 1 211174 New exons upstream (not chimeric) Not coding No Skipping of the exon containing the M (ATG) yes, not coding
5RACE367_chr7_115522073_115522115 CAV2 AC006159.1 5D07 EF070120 AC006159.1-015 1 211174 New exons upstream (not chimeric) Not coding No
yes, not coding
5RACE367_chr7_115522073_115522115 CAV2 AC006159.1 5E05 EF070121 AC006159.1-016 1 211174 New exons upstream (not chimeric) Not coding No Skipping of the exon containing the M (ATG) yes, not coding
5RACE367_chr7_115522073_115522115 CAV2 AC006159.1 5E06 EF070122 AC006159.1-017 1 211174 New exons upstream (not chimeric) Not coding No Skipping of the exon containing the M (ATG) yes, not coding
5RACE367_chr7_115523874_115523910 CAV2 AC006159.1 Affy08256B07 DQ656015 AC006159.1-007 3 209373 New exons upstream (not chimeric) Not coding No Skipping of the exon containing the M (ATG) yes, not coding
5RACE367_chr7_115523874_115523910 CAV2 AC006159.1 Affy08256F07 DQ656017 AC006159.1-006 3 209373 New exons upstream (not chimeric) Not coding No
yes, not coding
5RACE367_chr7_115523874_115523910 CAV2 AC006159.1 Affy3F10-1 DQ656068 AC006159.1-004 3 209373 New exons upstream (not chimeric) Not coding No New exon inside the CDS part yes, not coding
5RACE367_chr7_115523874_115523910 CAV2 AC006159.1 Affy3F10-7 DQ656069 AC006159.1-005 3 209373 New exons upstream (not chimeric) Not coding No
yes, not coding
5RACE411_chr11_5623571_5623597 HBG2 AC104389.21 Affy2H6-2 DQ656066 AC104389.21-001 3 140186 chimeric Coding No
yes, not coding
5RACE007_chr6_41645877_41645938 FOXP4 RP11-328M4.1 Affy08256A09 DQ656018 RP11-328M4.1-004 4 0 intronic Not coding No New exon inside the CDS part yes, not coding
5RACE374_chr7_116662093_116662131 ASZ1 AC002465.3 Affy08256D10 DQ656019 AC002465.3-005 1 619 New exons upstream (not chimeric) Coding Yes (ATG downstream: shorter CDS) Skipping of the exon containing the M (ATG) no
5RACE374_chr7_116661513_116661518 ASZ1 AC002465.3 Affy08256A11 DQ656020 AC002465.3-001 3 6 extension of the first exon Coding No
no
5RACE190_chr21_34209825_34209901 ATP5O AP000313.5 Affy08250G07 DQ656023 AP000313.5-007 4 0 intronic Not coding No New exon inside the CDS part no (extends exon into intron)
5RACE014_chr6_41829745_41829856 PGC RP11-298J23.1 Affy08256B12 DQ656024 RP11-298J23.1-004 2ab 6743 New exons upstream (not chimeric) Coding Yes (new ATG upstream) Skipping of the exon containing the M (ATG) yes, partly coding (ATG)
5RACE188_chr21_34206481_34206506 DONSON AP000304.9 Affy08248B10 DQ656027 AP000304.11-012 1 316865 chimeric Coding Yes (links CDS of the two adjacent loci) Skipping of the M (entirely open),Chimeric transcript with continuous ORF (entirely open) no
5RACE285_chr7_89614334_89614360 AC006153.3 AC006153.3 Affy08258B04 DQ656028 AC006153.3-007 3 6266 New exons upstream (not chimeric) Not coding No Skipping of the exon containing the M (ATG) yes, not coding
5RACE285_chr7_89614334_89614360 AC006153.3 AC006153.3 Affy08258C04 DQ656029 AC006153.3-008 3 6266 New exons upstream (not chimeric) Not coding No Skipping of the exon containing the M (ATG) yes, not coding
5RACE285_chr7_89614334_89614360 AC006153.3 AC006153.3 Affy08258D04 DQ656030 AC006153.3-010 3 6266 New exons upstream (not chimeric) Not coding No Skipping of the exon containing the M (ATG) yes, not coding
5RACE285_chr7_89614334_89614360 AC006153.3 AC006153.3 Affy08258H04 DQ656031 AC006153.3-009 3 6266 New exons upstream (not chimeric) Not coding No Skipping of the exon containing the M (ATG) yes, not coding
5RACE393_chr11_5685993_5686053 OR56B1 AC131574.4 Affy08250A12 DQ656032 AC131574.4-003 2a 28330 chimeric Not coding No
yes, not coding
5RACE393_chr11_5685993_5686053 OR56B1 AC131574.4 Affy08250B12 DQ656033 AC131574.4-002 2a 28330 chimeric Not coding No
yes, not coding
5RACE011_chr6_41411364_41411474 NCR2 RP1-149M18.2 Affy08252A03 DQ656036 RP1-149M18.2-001 1 141 extension of the first exon Coding No New M (ATG) upstream no
5RACE133_chr6_74228516_74228563 MTO1 RP11-505P4.1 Affy08242A03 DQ656037 RP11-505P4.1-011 4 0 intronic Coding No
no (extends an existing exon)
5RACE202_chr19_59652582_59652671 LENG8 AC008746.4 Affy08258B01 DQ656038 AC008746.4-003 4 0 extension of the first exon Coding No New M (ATG) upstream (entirely open) no