This directory contains the downloadable files associated with the ENCODE Regulation
'DNase Clusters' track.  All data in this track are freely available.

This track is described here:
    http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRegDnaseClusteredV3

ENCODE data files are subject to use restrictions for 9 months following data submission (http://genome.ucsc.edu/ENCODE/terms.html).  All data in this track have passed the 9 month restriction 
period and so are freely available.

The following files are provided for download:

Data files for this release:

* wgEncodeRegDnaseClusteredV3.bed.gz - DNase clusters (V3) from UW and Duke ENCODE data uniformly processed by the ENCODE Analysis Working Group, retaining 'clusters' from single cell types.

* wgEncodeRegDnaseClusteredCells.txt - Cell types with IDs describing sourceIds field of V3 bed file 
* wgEncodeRegDnaseClusteredInputsV2.tab.gz - Auxiliary table with metadata for the clusters

Data files from the previous release of this track:

* wgEncodeRegDnaseClustered.bed.gz - DNase clusters (V1) from UW ENCODE data
* wgEncodeRegDnaseClusteredV2.bed.gz - DNase clusters (V2) from UW ENCODE data
* wgEncodeRegDnaseClusteredInputs.tab.gz - Auxiliary table with metadata for the clusters (V1)

      Name                                     Last modified      Size  Description
      Parent Directory                                              -   
      files.txt                                2011-04-28 14:18  268   
      md5sum.txt                               2014-09-04 14:53  353   
      wgEncodeRegDnaseClustered.bed.gz         2011-04-28 14:16  9.2M  
      wgEncodeRegDnaseClusteredInputs.tab.gz   2011-04-28 14:16  1.4K  
      wgEncodeRegDnaseClusteredInputsV2.tab.gz 2013-01-16 16:50  1.3K  
      wgEncodeRegDnaseClusteredSources.tab     2014-08-04 13:07  1.4K  
      wgEncodeRegDnaseClusteredV2.bed.gz       2013-01-16 16:50   12M  
      wgEncodeRegDnaseClusteredV3.bed.gz       2014-09-04 14:49   70M